Query 010065
Match_columns 519
No_of_seqs 432 out of 3474
Neff 8.7
Searched_HMMs 29240
Date Mon Mar 25 19:08:06 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/010065.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/010065hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3mjf_A Phosphoribosylamine--gl 100.0 1.6E-67 5.4E-72 551.6 46.8 427 82-513 3-430 (431)
2 3lp8_A Phosphoribosylamine-gly 100.0 5.1E-66 1.8E-70 541.6 48.0 423 81-510 20-442 (442)
3 2yrx_A Phosphoribosylglycinami 100.0 8.5E-59 2.9E-63 489.4 51.1 426 74-510 11-438 (451)
4 2ip4_A PURD, phosphoribosylami 100.0 2.1E-58 7.1E-63 481.9 48.4 412 83-510 1-412 (417)
5 2yw2_A Phosphoribosylamine--gl 100.0 3.4E-58 1.2E-62 481.4 49.7 421 83-512 1-421 (424)
6 2xcl_A Phosphoribosylamine--gl 100.0 8.9E-59 3E-63 485.5 42.7 418 83-511 1-418 (422)
7 2qk4_A Trifunctional purine bi 100.0 2.9E-58 9.8E-63 485.7 42.7 423 82-510 24-448 (452)
8 1vkz_A Phosphoribosylamine--gl 100.0 2.6E-55 8.9E-60 457.4 41.6 398 81-507 14-412 (412)
9 3tqt_A D-alanine--D-alanine li 100.0 6.6E-47 2.3E-51 387.0 23.5 310 53-400 2-349 (372)
10 4fu0_A D-alanine--D-alanine li 100.0 8.2E-47 2.8E-51 385.7 22.0 312 55-403 3-348 (357)
11 3vot_A L-amino acid ligase, BL 100.0 3.6E-44 1.2E-48 375.1 39.1 398 81-507 4-421 (425)
12 3k3p_A D-alanine--D-alanine li 100.0 5.3E-46 1.8E-50 381.4 24.2 304 55-400 37-369 (383)
13 3i12_A D-alanine-D-alanine lig 100.0 7.2E-46 2.5E-50 379.6 24.8 310 54-400 2-348 (364)
14 3e5n_A D-alanine-D-alanine lig 100.0 5E-46 1.7E-50 382.8 19.4 309 54-400 21-367 (386)
15 3lwb_A D-alanine--D-alanine li 100.0 2.9E-45 9.8E-50 375.7 21.8 310 53-400 8-363 (373)
16 3se7_A VANA; alpha-beta struct 100.0 1.2E-45 4.1E-50 375.7 17.1 307 54-400 2-338 (346)
17 4dim_A Phosphoribosylglycinami 100.0 2.7E-42 9.1E-47 358.5 38.7 387 79-497 4-401 (403)
18 1kjq_A GART 2, phosphoribosylg 100.0 1.4E-41 4.7E-46 351.7 42.0 378 81-497 10-390 (391)
19 4eg0_A D-alanine--D-alanine li 100.0 1.4E-43 4.8E-48 356.3 24.8 289 54-402 12-314 (317)
20 1ehi_A LMDDL2, D-alanine:D-lac 100.0 3E-43 1E-47 361.9 27.3 304 55-400 3-349 (377)
21 1ulz_A Pyruvate carboxylase N- 100.0 5.1E-42 1.7E-46 361.6 36.3 391 82-507 2-420 (451)
22 2w70_A Biotin carboxylase; lig 100.0 1.7E-41 5.7E-46 357.4 38.7 393 82-507 2-420 (449)
23 3ax6_A Phosphoribosylaminoimid 100.0 4.1E-41 1.4E-45 346.8 40.7 365 83-497 2-371 (380)
24 3k5i_A Phosphoribosyl-aminoimi 100.0 7.4E-41 2.5E-45 346.9 41.2 371 81-495 23-399 (403)
25 2dwc_A PH0318, 433AA long hypo 100.0 4.7E-41 1.6E-45 352.4 39.8 385 82-502 19-419 (433)
26 4e4t_A Phosphoribosylaminoimid 100.0 1.6E-40 5.5E-45 345.6 42.5 377 79-497 32-417 (419)
27 2i87_A D-alanine-D-alanine lig 100.0 1.7E-42 5.9E-47 354.9 24.9 309 55-401 3-340 (364)
28 3ouz_A Biotin carboxylase; str 100.0 6.6E-41 2.2E-45 352.5 37.3 408 82-517 6-440 (446)
29 2vpq_A Acetyl-COA carboxylase; 100.0 6.4E-41 2.2E-45 353.2 37.2 404 83-518 2-439 (451)
30 3aw8_A PURK, phosphoribosylami 100.0 9.9E-40 3.4E-44 335.2 42.6 357 84-495 1-361 (369)
31 2dzd_A Pyruvate carboxylase; b 100.0 2E-40 7E-45 350.3 37.8 395 82-507 6-432 (461)
32 2pvp_A D-alanine-D-alanine lig 100.0 1E-42 3.5E-47 355.8 19.4 299 53-402 18-347 (367)
33 2fb9_A D-alanine:D-alanine lig 100.0 5.3E-42 1.8E-46 345.3 22.0 295 55-400 3-318 (322)
34 1e4e_A Vancomycin/teicoplanin 100.0 1.6E-42 5.5E-47 352.4 16.4 306 55-400 3-338 (343)
35 4ffl_A PYLC; amino acid, biosy 100.0 2.9E-39 1E-43 331.0 39.3 354 82-497 1-358 (363)
36 1w96_A ACC, acetyl-coenzyme A 100.0 6E-39 2.1E-43 345.7 43.6 397 82-507 47-530 (554)
37 3r5x_A D-alanine--D-alanine li 100.0 1.9E-41 6.4E-46 339.2 18.6 285 54-400 2-296 (307)
38 3jrx_A Acetyl-COA carboxylase 100.0 3.5E-39 1.2E-43 344.9 36.6 388 82-498 56-524 (587)
39 3orq_A N5-carboxyaminoimidazol 100.0 2.5E-38 8.6E-43 325.3 40.5 360 79-490 9-372 (377)
40 3glk_A Acetyl-COA carboxylase 100.0 5.2E-39 1.8E-43 342.6 35.4 408 82-517 40-533 (540)
41 3q2o_A Phosphoribosylaminoimid 100.0 9.7E-38 3.3E-42 322.6 42.5 362 80-492 12-377 (389)
42 3u9t_A MCC alpha, methylcroton 100.0 3.8E-39 1.3E-43 352.2 26.6 390 82-498 28-441 (675)
43 2z04_A Phosphoribosylaminoimid 100.0 2.7E-38 9.4E-43 324.0 30.8 358 82-501 1-362 (365)
44 1iow_A DD-ligase, DDLB, D-ALA\ 100.0 6.1E-39 2.1E-43 320.5 25.1 285 55-400 2-303 (306)
45 3va7_A KLLA0E08119P; carboxyla 100.0 5.8E-38 2E-42 359.4 27.4 409 82-515 31-463 (1236)
46 3n6r_A Propionyl-COA carboxyla 100.0 3.3E-38 1.1E-42 345.0 23.3 392 83-499 3-435 (681)
47 3eth_A Phosphoribosylaminoimid 100.0 5E-36 1.7E-40 303.9 35.2 331 83-495 2-340 (355)
48 2qf7_A Pyruvate carboxylase pr 100.0 1.3E-36 4.5E-41 348.4 32.0 394 83-507 15-448 (1165)
49 3hbl_A Pyruvate carboxylase; T 100.0 7.8E-37 2.7E-41 349.5 26.8 408 82-517 4-447 (1150)
50 1a9x_A Carbamoyl phosphate syn 100.0 9E-35 3.1E-39 333.9 41.4 369 96-500 32-410 (1073)
51 1a9x_A Carbamoyl phosphate syn 100.0 2.5E-34 8.5E-39 330.3 40.6 374 81-507 558-954 (1073)
52 2pn1_A Carbamoylphosphate synt 100.0 1.4E-33 4.7E-38 285.1 30.1 297 81-415 3-311 (331)
53 3vmm_A Alanine-anticapsin liga 100.0 5.4E-32 1.8E-36 285.2 37.7 250 136-403 91-361 (474)
54 1uc8_A LYSX, lysine biosynthes 100.0 1.6E-28 5.5E-33 241.5 25.3 271 85-403 2-279 (280)
55 2r85_A PURP protein PF1517; AT 100.0 5.7E-28 1.9E-32 244.0 26.4 266 82-378 2-291 (334)
56 2r7k_A 5-formaminoimidazole-4- 100.0 3E-27 1E-31 239.4 22.3 276 81-378 17-318 (361)
57 3df7_A Putative ATP-grAsp supe 100.0 2.7E-27 9.1E-32 235.9 21.1 208 137-398 61-271 (305)
58 1gsa_A Glutathione synthetase; 99.9 9.4E-25 3.2E-29 218.3 19.9 297 56-402 2-312 (316)
59 2pbz_A Hypothetical protein; N 99.9 6.7E-24 2.3E-28 210.8 12.7 251 83-377 3-271 (320)
60 3ln7_A Glutathione biosynthesi 99.9 1.7E-22 5.7E-27 221.4 15.5 246 135-402 434-755 (757)
61 1z2n_X Inositol 1,3,4-trisphos 99.9 7.1E-21 2.4E-25 191.2 22.2 206 147-380 55-304 (324)
62 3ln6_A Glutathione biosynthesi 99.8 9.3E-21 3.2E-25 208.2 16.2 242 136-400 430-747 (750)
63 2q7d_A Inositol-tetrakisphosph 99.8 4E-19 1.4E-23 179.0 21.0 221 146-401 62-329 (346)
64 1i7n_A Synapsin II; synapse, p 99.8 1.2E-17 4E-22 164.7 24.6 220 147-400 68-304 (309)
65 2p0a_A Synapsin-3, synapsin II 99.8 3E-17 1E-21 163.6 24.8 222 147-402 85-323 (344)
66 1pk8_A RAT synapsin I; ATP bin 99.8 3.2E-17 1.1E-21 166.0 24.9 222 147-402 180-418 (422)
67 1wr2_A Hypothetical protein PH 99.7 3E-17 1E-21 157.3 10.8 175 185-375 19-217 (238)
68 2cqy_A Propionyl-COA carboxyla 99.6 7.8E-18 2.7E-22 140.6 -0.8 100 182-283 3-107 (108)
69 3t7a_A Inositol pyrophosphate 99.6 2.6E-15 9E-20 143.9 8.4 202 148-376 58-291 (330)
70 2fp4_B Succinyl-COA ligase [GD 99.3 1.6E-12 5.4E-17 132.6 5.6 101 187-287 4-124 (395)
71 2nu8_B SCS-beta, succinyl-COA 99.2 2E-10 6.7E-15 117.0 14.5 102 186-287 3-117 (388)
72 3ufx_B Succinyl-COA synthetase 99.2 2E-10 7E-15 117.2 13.4 101 187-287 4-109 (397)
73 3tig_A TTL protein; ATP-grAsp, 98.1 0.00012 4.1E-09 73.4 17.0 165 222-403 147-361 (380)
74 3mwd_A ATP-citrate synthase; A 97.2 0.00058 2E-08 69.7 8.1 100 188-287 8-128 (425)
75 3pff_A ATP-citrate synthase; p 96.9 0.0014 4.7E-08 72.1 7.7 100 188-287 8-128 (829)
76 3nkl_A UDP-D-quinovosamine 4-d 93.1 0.27 9.2E-06 41.5 7.8 96 81-180 3-102 (141)
77 3ic5_A Putative saccharopine d 92.8 0.21 7.3E-06 40.3 6.4 91 82-176 5-98 (118)
78 3i6i_A Putative leucoanthocyan 92.6 1.1 3.6E-05 44.0 12.4 92 82-175 10-115 (346)
79 3n6x_A Putative glutathionylsp 92.5 0.18 6.1E-06 51.9 6.7 70 200-276 341-412 (474)
80 3abi_A Putative uncharacterize 90.7 0.41 1.4E-05 47.7 7.0 116 81-205 15-131 (365)
81 2pzm_A Putative nucleotide sug 90.0 1.1 3.6E-05 43.7 9.3 72 80-153 18-94 (330)
82 4egb_A DTDP-glucose 4,6-dehydr 89.6 0.73 2.5E-05 45.1 7.8 71 81-153 23-104 (346)
83 1qyc_A Phenylcoumaran benzylic 88.8 2.7 9.2E-05 40.1 11.1 89 82-174 4-108 (308)
84 4id9_A Short-chain dehydrogena 88.7 0.96 3.3E-05 44.2 7.8 66 80-153 17-83 (347)
85 3dhn_A NAD-dependent epimerase 88.5 1 3.6E-05 40.9 7.6 68 82-153 4-73 (227)
86 3qvo_A NMRA family protein; st 88.2 2.9 0.0001 38.3 10.5 68 82-153 23-94 (236)
87 1qyd_A Pinoresinol-lariciresin 88.0 4.4 0.00015 38.6 12.0 88 82-173 4-110 (313)
88 2gas_A Isoflavone reductase; N 87.8 3.3 0.00011 39.4 11.0 89 82-174 2-107 (307)
89 3r6d_A NAD-dependent epimerase 87.7 2.8 9.4E-05 37.9 9.8 87 83-173 6-101 (221)
90 2q1w_A Putative nucleotide sug 87.1 1.6 5.4E-05 42.5 8.3 72 80-153 19-95 (333)
91 1y81_A Conserved hypothetical 87.0 5.1 0.00018 33.6 10.4 37 78-115 10-50 (138)
92 3enk_A UDP-glucose 4-epimerase 87.0 2.1 7.2E-05 41.5 9.2 71 81-153 4-84 (341)
93 2r6j_A Eugenol synthase 1; phe 86.9 2.6 9E-05 40.5 9.7 116 83-202 12-150 (318)
94 4ina_A Saccharopine dehydrogen 86.8 1.4 4.8E-05 44.6 7.9 119 83-202 2-136 (405)
95 3dqp_A Oxidoreductase YLBE; al 86.0 0.83 2.8E-05 41.5 5.2 67 83-153 1-69 (219)
96 3keo_A Redox-sensing transcrip 84.6 1 3.6E-05 41.1 5.0 92 81-175 83-176 (212)
97 3llv_A Exopolyphosphatase-rela 84.4 1.5 5.1E-05 36.7 5.7 87 82-171 6-95 (141)
98 2io8_A Bifunctional glutathion 83.9 1.1 3.8E-05 47.8 5.6 113 163-292 475-595 (619)
99 1hdo_A Biliverdin IX beta redu 83.4 2.8 9.7E-05 37.0 7.5 67 83-153 4-73 (206)
100 2yy7_A L-threonine dehydrogena 83.3 1.9 6.4E-05 41.3 6.6 70 83-153 3-74 (312)
101 2z1m_A GDP-D-mannose dehydrata 83.1 3.9 0.00013 39.5 9.0 70 82-153 3-81 (345)
102 2ph5_A Homospermidine synthase 82.8 1.6 5.3E-05 44.9 6.0 93 82-177 13-113 (480)
103 3vtz_A Glucose 1-dehydrogenase 82.7 3.3 0.00011 38.9 8.0 69 81-153 13-87 (269)
104 1rkx_A CDP-glucose-4,6-dehydra 82.6 4.1 0.00014 39.8 9.0 70 82-153 9-86 (357)
105 3c1o_A Eugenol synthase; pheny 82.5 5.3 0.00018 38.3 9.6 117 82-202 4-148 (321)
106 4b79_A PA4098, probable short- 82.5 7 0.00024 36.3 9.9 73 79-153 8-84 (242)
107 2c20_A UDP-glucose 4-epimerase 82.2 3.3 0.00011 39.9 8.0 70 82-153 1-73 (330)
108 2duw_A Putative COA-binding pr 81.9 7.9 0.00027 32.7 9.3 34 82-116 13-50 (145)
109 3o9z_A Lipopolysaccaride biosy 81.8 3.3 0.00011 40.1 7.8 117 82-202 3-126 (312)
110 3uuw_A Putative oxidoreductase 81.7 1 3.5E-05 43.6 4.0 114 81-202 5-120 (308)
111 2p5y_A UDP-glucose 4-epimerase 81.6 4.7 0.00016 38.5 8.8 69 83-153 1-72 (311)
112 1rpn_A GDP-mannose 4,6-dehydra 81.3 3.5 0.00012 39.8 7.9 71 81-153 13-92 (335)
113 3gpi_A NAD-dependent epimerase 81.2 1.4 4.7E-05 41.8 4.7 67 82-153 3-69 (286)
114 3d7l_A LIN1944 protein; APC893 81.1 3.2 0.00011 36.8 6.9 61 81-153 2-64 (202)
115 2g1u_A Hypothetical protein TM 80.8 8.6 0.00029 32.6 9.3 85 82-169 19-107 (155)
116 1n7h_A GDP-D-mannose-4,6-dehyd 80.8 4.7 0.00016 39.8 8.7 69 83-153 29-112 (381)
117 3evn_A Oxidoreductase, GFO/IDH 80.7 3.6 0.00012 40.0 7.7 144 81-229 4-153 (329)
118 2pk3_A GDP-6-deoxy-D-LYXO-4-he 80.0 4.8 0.00017 38.5 8.3 68 82-153 12-80 (321)
119 2x4g_A Nucleoside-diphosphate- 80.0 3.8 0.00013 39.6 7.6 68 82-153 13-83 (342)
120 3un1_A Probable oxidoreductase 79.9 4.7 0.00016 37.7 8.0 69 82-153 28-102 (260)
121 2c5a_A GDP-mannose-3', 5'-epim 79.9 6.9 0.00023 38.7 9.6 69 81-153 28-99 (379)
122 3rjz_A N-type ATP pyrophosphat 79.2 8.4 0.00029 35.7 9.1 141 82-230 4-147 (237)
123 3ff4_A Uncharacterized protein 78.9 11 0.00037 30.9 8.8 91 82-176 4-110 (122)
124 3bio_A Oxidoreductase, GFO/IDH 78.8 2.4 8.2E-05 41.0 5.6 112 81-201 8-119 (304)
125 4ea9_A Perosamine N-acetyltran 78.2 9.5 0.00032 34.5 9.3 35 81-116 11-45 (220)
126 2hmt_A YUAA protein; RCK, KTN, 78.2 7 0.00024 32.1 7.8 89 82-173 6-98 (144)
127 2dtx_A Glucose 1-dehydrogenase 78.2 7.9 0.00027 36.2 8.9 67 82-153 8-80 (264)
128 3slg_A PBGP3 protein; structur 77.9 4.9 0.00017 39.5 7.8 70 81-153 23-97 (372)
129 2dt5_A AT-rich DNA-binding pro 77.9 1.9 6.4E-05 39.4 4.2 88 81-174 79-167 (211)
130 3rft_A Uronate dehydrogenase; 77.7 3.8 0.00013 38.4 6.5 67 82-153 3-70 (267)
131 2nm0_A Probable 3-oxacyl-(acyl 77.7 7.7 0.00026 36.0 8.7 67 82-153 21-93 (253)
132 3ruf_A WBGU; rossmann fold, UD 77.6 3.3 0.00011 40.3 6.3 68 82-153 25-106 (351)
133 3sc6_A DTDP-4-dehydrorhamnose 77.2 3.5 0.00012 38.8 6.2 56 83-153 6-62 (287)
134 3ec7_A Putative dehydrogenase; 77.2 2.2 7.4E-05 42.3 4.8 141 82-228 23-173 (357)
135 1n2s_A DTDP-4-, DTDP-glucose o 77.1 5.3 0.00018 37.7 7.5 59 83-153 1-60 (299)
136 3e9m_A Oxidoreductase, GFO/IDH 77.1 2.3 7.9E-05 41.5 5.0 144 81-229 4-153 (330)
137 4dqx_A Probable oxidoreductase 76.9 2.9 9.8E-05 39.7 5.4 81 71-153 16-107 (277)
138 1t2a_A GDP-mannose 4,6 dehydra 76.9 6.4 0.00022 38.7 8.3 69 83-153 25-108 (375)
139 3tpc_A Short chain alcohol deh 76.8 7.7 0.00026 35.9 8.4 71 81-153 6-87 (257)
140 3e48_A Putative nucleoside-dip 76.8 15 0.0005 34.4 10.5 68 83-153 1-71 (289)
141 2d59_A Hypothetical protein PH 76.2 21 0.00073 29.9 10.3 33 82-115 22-58 (144)
142 4ew6_A D-galactose-1-dehydroge 75.5 5.9 0.0002 38.6 7.4 109 82-202 25-135 (330)
143 1orr_A CDP-tyvelose-2-epimeras 75.4 6.3 0.00022 38.0 7.7 69 83-153 2-79 (347)
144 1uay_A Type II 3-hydroxyacyl-C 75.2 7.2 0.00025 35.4 7.6 66 82-153 2-72 (242)
145 1udb_A Epimerase, UDP-galactos 75.2 9.8 0.00033 36.6 9.0 69 83-153 1-79 (338)
146 2axq_A Saccharopine dehydrogen 75.0 6.2 0.00021 40.6 7.7 116 82-204 23-141 (467)
147 2fwm_X 2,3-dihydro-2,3-dihydro 74.9 12 0.0004 34.5 9.0 68 82-153 7-80 (250)
148 1id1_A Putative potassium chan 74.7 6.9 0.00024 33.0 6.9 86 82-170 3-95 (153)
149 1e6u_A GDP-fucose synthetase; 74.6 6.1 0.00021 37.8 7.3 58 82-153 3-61 (321)
150 3m2t_A Probable dehydrogenase; 74.6 2.6 8.9E-05 41.7 4.6 116 81-202 4-122 (359)
151 3kux_A Putative oxidoreductase 74.6 2.7 9.3E-05 41.3 4.8 143 79-228 4-152 (352)
152 3m2p_A UDP-N-acetylglucosamine 74.6 6.2 0.00021 37.6 7.3 66 82-153 2-68 (311)
153 3orf_A Dihydropteridine reduct 74.3 8.1 0.00028 35.7 7.8 66 82-153 22-93 (251)
154 1kew_A RMLB;, DTDP-D-glucose 4 74.3 8.3 0.00028 37.5 8.3 70 83-153 1-79 (361)
155 2dkn_A 3-alpha-hydroxysteroid 74.2 3.9 0.00013 37.6 5.5 64 83-153 2-68 (255)
156 3oa2_A WBPB; oxidoreductase, s 74.0 6.8 0.00023 37.9 7.4 117 82-202 3-127 (318)
157 1sny_A Sniffer CG10964-PA; alp 73.6 3.3 0.00011 38.6 4.9 85 67-153 6-108 (267)
158 1vl0_A DTDP-4-dehydrorhamnose 73.6 6.4 0.00022 37.1 7.0 57 82-153 12-69 (292)
159 1db3_A GDP-mannose 4,6-dehydra 73.6 8.2 0.00028 37.7 8.0 69 83-153 2-84 (372)
160 3kvo_A Hydroxysteroid dehydrog 73.4 12 0.00043 36.5 9.2 71 81-153 44-135 (346)
161 3sc4_A Short chain dehydrogena 73.2 10 0.00035 35.8 8.4 71 81-153 8-99 (285)
162 3fwz_A Inner membrane protein 72.5 6.2 0.00021 32.9 5.9 109 82-201 7-120 (140)
163 2z2v_A Hypothetical protein PH 72.5 6.8 0.00023 38.8 7.0 114 82-204 16-130 (365)
164 3o38_A Short chain dehydrogena 72.3 5.2 0.00018 37.3 5.9 71 81-153 21-107 (266)
165 1gy8_A UDP-galactose 4-epimera 72.2 7.5 0.00026 38.4 7.4 70 82-153 2-99 (397)
166 2ydy_A Methionine adenosyltran 72.1 4.6 0.00016 38.5 5.7 63 83-153 3-66 (315)
167 3db2_A Putative NADPH-dependen 72.1 2.6 8.7E-05 41.6 3.8 142 81-228 4-151 (354)
168 1jw9_B Molybdopterin biosynthe 71.9 17 0.00059 33.6 9.4 33 82-115 31-64 (249)
169 3rc1_A Sugar 3-ketoreductase; 71.6 1.7 5.7E-05 42.9 2.3 143 81-229 26-175 (350)
170 2o23_A HADH2 protein; HSD17B10 71.4 11 0.00036 34.9 7.9 71 81-153 11-92 (265)
171 3e18_A Oxidoreductase; dehydro 71.3 2 6.9E-05 42.5 2.9 116 81-202 4-119 (359)
172 4dyv_A Short-chain dehydrogena 71.0 3.2 0.00011 39.2 4.2 86 65-153 12-108 (272)
173 1sb8_A WBPP; epimerase, 4-epim 71.0 7.4 0.00025 37.8 7.0 68 82-153 27-108 (352)
174 2lpm_A Two-component response 70.9 15 0.00051 30.0 7.7 71 82-175 8-83 (123)
175 3p19_A BFPVVD8, putative blue 70.9 5.4 0.00019 37.4 5.7 70 82-153 16-93 (266)
176 1ek6_A UDP-galactose 4-epimera 70.8 11 0.00038 36.3 8.2 70 82-153 2-87 (348)
177 3tzq_B Short-chain type dehydr 70.6 9.4 0.00032 35.8 7.3 71 81-153 10-91 (271)
178 2dc1_A L-aspartate dehydrogena 70.5 18 0.00061 33.0 9.1 104 83-201 1-104 (236)
179 1tlt_A Putative oxidoreductase 70.4 4.7 0.00016 39.0 5.3 114 81-202 4-119 (319)
180 3r1i_A Short-chain type dehydr 70.2 6.8 0.00023 37.0 6.2 71 81-153 31-115 (276)
181 3sxp_A ADP-L-glycero-D-mannohe 70.1 9.1 0.00031 37.4 7.4 71 81-153 9-96 (362)
182 3gk3_A Acetoacetyl-COA reducta 70.1 4.4 0.00015 38.0 4.9 74 78-153 21-109 (269)
183 2v6g_A Progesterone 5-beta-red 69.8 7.3 0.00025 37.9 6.7 69 83-153 2-78 (364)
184 3ajr_A NDP-sugar epimerase; L- 69.7 11 0.00039 35.7 7.9 66 84-153 1-68 (317)
185 3c1a_A Putative oxidoreductase 69.5 1.8 6.3E-05 41.8 2.1 141 81-229 9-153 (315)
186 3m1a_A Putative dehydrogenase; 69.4 5.6 0.00019 37.4 5.5 70 82-153 5-85 (281)
187 3rih_A Short chain dehydrogena 69.4 5.6 0.00019 38.0 5.5 71 81-153 40-125 (293)
188 3uxy_A Short-chain dehydrogena 69.3 12 0.00041 34.9 7.8 68 81-153 27-100 (266)
189 1dhr_A Dihydropteridine reduct 69.3 11 0.00036 34.5 7.3 69 81-153 6-82 (241)
190 3gdg_A Probable NADP-dependent 68.9 7.4 0.00025 36.2 6.2 70 82-153 20-107 (267)
191 1uzm_A 3-oxoacyl-[acyl-carrier 68.8 12 0.0004 34.5 7.5 68 81-153 14-87 (247)
192 4b8w_A GDP-L-fucose synthase; 68.7 9 0.00031 36.2 6.9 62 81-153 5-67 (319)
193 3eag_A UDP-N-acetylmuramate:L- 68.7 20 0.00067 34.7 9.4 34 81-115 3-37 (326)
194 3ak4_A NADH-dependent quinucli 68.6 5.8 0.0002 36.9 5.3 71 81-153 11-92 (263)
195 3e03_A Short chain dehydrogena 68.5 15 0.00052 34.3 8.4 71 81-153 5-96 (274)
196 2jl1_A Triphenylmethane reduct 68.4 7.7 0.00026 36.3 6.2 68 83-153 1-72 (287)
197 2hrz_A AGR_C_4963P, nucleoside 68.3 12 0.00042 35.9 7.9 70 81-153 13-92 (342)
198 1iuk_A Hypothetical protein TT 68.0 22 0.00074 29.7 8.3 34 81-115 12-49 (140)
199 1zud_1 Adenylyltransferase THI 67.7 42 0.0014 31.0 11.1 114 82-201 28-145 (251)
200 4amg_A Snogd; transferase, pol 67.5 24 0.00084 34.5 10.1 42 72-114 12-58 (400)
201 3l4b_C TRKA K+ channel protien 67.2 7.2 0.00024 35.2 5.5 109 83-201 1-114 (218)
202 4iin_A 3-ketoacyl-acyl carrier 67.1 5.2 0.00018 37.5 4.7 71 81-153 28-113 (271)
203 2ho3_A Oxidoreductase, GFO/IDH 67.0 4.5 0.00015 39.2 4.3 89 82-175 1-90 (325)
204 3dfz_A SIRC, precorrin-2 dehyd 66.9 17 0.00058 33.2 7.9 34 81-115 30-63 (223)
205 3h7a_A Short chain dehydrogena 66.1 8.3 0.00028 35.7 5.9 71 81-153 6-89 (252)
206 4hkt_A Inositol 2-dehydrogenas 66.1 3 0.0001 40.6 2.8 140 82-228 3-148 (331)
207 1ooe_A Dihydropteridine reduct 65.7 11 0.00039 34.2 6.7 68 82-153 3-78 (236)
208 2vt3_A REX, redox-sensing tran 65.7 7.1 0.00024 35.6 5.1 87 81-173 84-171 (215)
209 3afn_B Carbonyl reductase; alp 65.4 8.6 0.00029 35.3 5.8 70 82-153 7-91 (258)
210 1fjh_A 3alpha-hydroxysteroid d 65.3 6.5 0.00022 36.3 4.9 64 83-153 2-68 (257)
211 1yo6_A Putative carbonyl reduc 65.1 10 0.00034 34.5 6.2 70 82-153 3-87 (250)
212 4e6p_A Probable sorbitol dehyd 65.0 6.6 0.00022 36.5 4.9 71 81-153 7-88 (259)
213 3ay3_A NAD-dependent epimerase 65.0 6.9 0.00024 36.3 5.1 66 83-153 3-69 (267)
214 3ai3_A NADPH-sorbose reductase 64.9 7.9 0.00027 36.0 5.4 70 82-153 7-91 (263)
215 3rwb_A TPLDH, pyridoxal 4-dehy 64.8 7.5 0.00025 35.9 5.2 71 81-153 5-86 (247)
216 3dii_A Short-chain dehydrogena 64.7 10 0.00035 34.9 6.2 69 83-153 3-81 (247)
217 3qiv_A Short-chain dehydrogena 64.6 6.7 0.00023 36.2 4.9 71 81-153 8-92 (253)
218 2ag5_A DHRS6, dehydrogenase/re 64.4 7.8 0.00027 35.6 5.2 70 82-153 6-80 (246)
219 2q1s_A Putative nucleotide sug 64.4 11 0.00036 37.2 6.6 68 82-153 32-105 (377)
220 1iy8_A Levodione reductase; ox 63.8 8.2 0.00028 36.0 5.4 71 81-153 12-98 (267)
221 3s2u_A UDP-N-acetylglucosamine 63.8 23 0.00077 34.8 8.9 32 82-114 2-38 (365)
222 3pdi_A Nitrogenase MOFE cofact 63.7 16 0.00056 37.6 8.0 85 82-175 332-423 (483)
223 3v2h_A D-beta-hydroxybutyrate 63.4 11 0.00039 35.4 6.3 70 82-153 25-110 (281)
224 2wm3_A NMRA-like family domain 63.4 11 0.00038 35.6 6.3 69 82-154 5-79 (299)
225 3f1l_A Uncharacterized oxidore 63.3 10 0.00034 35.1 5.8 72 80-153 10-98 (252)
226 3sju_A Keto reductase; short-c 63.2 8.2 0.00028 36.4 5.3 71 81-153 23-107 (279)
227 2ggs_A 273AA long hypothetical 63.2 20 0.00067 33.1 7.9 62 83-153 1-63 (273)
228 3rd5_A Mypaa.01249.C; ssgcid, 63.2 7.6 0.00026 36.8 5.1 71 81-153 15-92 (291)
229 3mz0_A Inositol 2-dehydrogenas 63.1 2.9 9.8E-05 41.0 2.0 141 82-228 2-152 (344)
230 3tfo_A Putative 3-oxoacyl-(acy 63.0 5.5 0.00019 37.4 3.9 71 81-153 3-87 (264)
231 2d1y_A Hypothetical protein TT 63.0 8.3 0.00028 35.7 5.2 69 82-153 6-83 (256)
232 1ydw_A AX110P-like protein; st 63.0 2.6 9E-05 41.6 1.8 116 81-202 5-125 (362)
233 3awd_A GOX2181, putative polyo 62.8 9 0.00031 35.3 5.4 71 81-153 12-96 (260)
234 1ff9_A Saccharopine reductase; 62.7 25 0.00084 35.8 9.1 113 82-202 3-119 (450)
235 2hq1_A Glucose/ribitol dehydro 62.6 14 0.00048 33.6 6.7 70 82-153 5-89 (247)
236 3euw_A MYO-inositol dehydrogen 62.5 6 0.00021 38.6 4.3 143 81-229 3-151 (344)
237 3nyw_A Putative oxidoreductase 62.5 6.7 0.00023 36.3 4.4 71 81-153 6-93 (250)
238 1yb1_A 17-beta-hydroxysteroid 62.4 9.1 0.00031 35.8 5.4 70 82-153 31-114 (272)
239 1w6u_A 2,4-dienoyl-COA reducta 62.4 9 0.00031 36.3 5.4 71 81-153 25-110 (302)
240 3pdi_B Nitrogenase MOFE cofact 62.2 27 0.00092 35.7 9.2 84 82-175 313-397 (458)
241 3osu_A 3-oxoacyl-[acyl-carrier 62.0 8.4 0.00029 35.4 5.0 71 81-153 3-88 (246)
242 1xq6_A Unknown protein; struct 62.0 9.5 0.00032 34.7 5.4 69 82-153 4-75 (253)
243 3tjr_A Short chain dehydrogena 62.0 12 0.0004 35.8 6.2 71 81-153 30-114 (301)
244 3n74_A 3-ketoacyl-(acyl-carrie 61.9 8 0.00028 35.8 4.9 71 81-153 8-89 (261)
245 1xg5_A ARPG836; short chain de 61.9 8.3 0.00028 36.2 5.0 70 82-153 32-117 (279)
246 2a4k_A 3-oxoacyl-[acyl carrier 61.7 8.4 0.00029 36.0 5.0 70 82-153 6-86 (263)
247 2h7i_A Enoyl-[acyl-carrier-pro 61.6 15 0.00052 34.2 6.8 70 82-153 7-93 (269)
248 2ae2_A Protein (tropinone redu 61.6 12 0.0004 34.7 6.0 71 81-153 8-93 (260)
249 3l6e_A Oxidoreductase, short-c 61.4 6.3 0.00021 36.1 3.9 70 82-153 3-83 (235)
250 3k31_A Enoyl-(acyl-carrier-pro 61.4 17 0.0006 34.4 7.3 71 81-153 29-114 (296)
251 3fhl_A Putative oxidoreductase 61.0 5.1 0.00017 39.5 3.4 142 81-229 4-151 (362)
252 3ezl_A Acetoacetyl-COA reducta 61.0 11 0.00037 34.8 5.6 71 81-153 12-97 (256)
253 3i4f_A 3-oxoacyl-[acyl-carrier 61.0 6.4 0.00022 36.6 4.0 70 82-153 7-91 (264)
254 4e4y_A Short chain dehydrogena 60.9 19 0.00064 32.9 7.2 69 82-153 4-76 (244)
255 3oid_A Enoyl-[acyl-carrier-pro 60.9 7.3 0.00025 36.3 4.4 71 81-153 3-88 (258)
256 4e3z_A Putative oxidoreductase 60.9 7.1 0.00024 36.5 4.3 71 81-153 25-110 (272)
257 3ucx_A Short chain dehydrogena 60.7 12 0.00041 34.8 5.9 71 81-153 10-94 (264)
258 3ged_A Short-chain dehydrogena 60.6 16 0.00055 33.9 6.6 69 83-153 3-81 (247)
259 3pk0_A Short-chain dehydrogena 60.6 6.5 0.00022 36.6 4.0 71 81-153 9-94 (262)
260 2cfc_A 2-(R)-hydroxypropyl-COM 60.6 13 0.00045 33.9 6.1 70 82-153 2-86 (250)
261 4had_A Probable oxidoreductase 60.5 11 0.00036 36.9 5.7 141 82-228 23-171 (350)
262 2jfz_A Glutamate racemase; cel 60.5 29 0.00099 32.2 8.5 89 83-182 1-97 (255)
263 2ehd_A Oxidoreductase, oxidore 60.4 6.1 0.00021 35.9 3.7 70 82-153 5-84 (234)
264 3pxx_A Carveol dehydrogenase; 60.1 32 0.0011 32.0 8.9 33 81-114 9-42 (287)
265 3ek2_A Enoyl-(acyl-carrier-pro 60.0 12 0.00041 34.6 5.8 71 81-153 13-98 (271)
266 3lyl_A 3-oxoacyl-(acyl-carrier 59.9 8.6 0.00029 35.2 4.7 70 82-153 5-88 (247)
267 1z45_A GAL10 bifunctional prot 59.9 23 0.00078 38.2 8.7 71 81-153 10-90 (699)
268 3edm_A Short chain dehydrogena 59.9 15 0.0005 34.1 6.3 71 81-153 7-92 (259)
269 3s55_A Putative short-chain de 59.8 25 0.00085 32.9 8.0 33 81-114 9-42 (281)
270 2bgk_A Rhizome secoisolaricire 59.6 8 0.00027 36.1 4.5 71 81-153 15-98 (278)
271 1cyd_A Carbonyl reductase; sho 59.4 7.1 0.00024 35.6 4.0 71 81-153 6-82 (244)
272 3l77_A Short-chain alcohol deh 59.3 6.8 0.00023 35.6 3.8 70 82-153 2-86 (235)
273 4f3y_A DHPR, dihydrodipicolina 59.2 44 0.0015 31.4 9.5 87 82-175 7-101 (272)
274 3uce_A Dehydrogenase; rossmann 59.1 13 0.00044 33.5 5.6 58 82-153 6-65 (223)
275 2b4q_A Rhamnolipids biosynthes 59.1 8.7 0.0003 36.2 4.6 71 81-153 28-111 (276)
276 1x1t_A D(-)-3-hydroxybutyrate 59.1 12 0.00041 34.6 5.6 70 82-153 4-89 (260)
277 3v2g_A 3-oxoacyl-[acyl-carrier 59.0 14 0.00049 34.5 6.1 71 81-153 30-115 (271)
278 3imf_A Short chain dehydrogena 59.0 6.9 0.00023 36.4 3.8 71 81-153 5-89 (257)
279 3uve_A Carveol dehydrogenase ( 58.9 34 0.0012 32.0 8.8 34 81-115 10-44 (286)
280 4gx0_A TRKA domain protein; me 58.8 32 0.0011 36.0 9.4 109 83-202 349-458 (565)
281 3gvc_A Oxidoreductase, probabl 58.8 7.6 0.00026 36.7 4.1 71 81-153 28-109 (277)
282 1i24_A Sulfolipid biosynthesis 58.6 10 0.00035 37.5 5.3 71 81-153 10-106 (404)
283 2ew8_A (S)-1-phenylethanol deh 58.5 15 0.00051 33.7 6.1 70 82-153 7-88 (249)
284 3e82_A Putative oxidoreductase 58.5 4.3 0.00015 40.1 2.4 142 81-229 6-153 (364)
285 3fbs_A Oxidoreductase; structu 58.3 30 0.001 32.0 8.4 33 82-115 2-34 (297)
286 3rkr_A Short chain oxidoreduct 58.2 7 0.00024 36.4 3.7 70 82-153 29-112 (262)
287 1yxm_A Pecra, peroxisomal tran 58.2 18 0.00062 34.1 6.8 71 81-153 17-106 (303)
288 3ijr_A Oxidoreductase, short c 58.2 18 0.00062 34.2 6.8 71 81-153 46-131 (291)
289 3is3_A 17BETA-hydroxysteroid d 58.2 10 0.00035 35.4 4.9 71 81-153 17-102 (270)
290 3zv4_A CIS-2,3-dihydrobiphenyl 58.1 10 0.00035 35.7 5.0 71 81-153 4-85 (281)
291 2jah_A Clavulanic acid dehydro 57.8 13 0.00045 34.1 5.5 70 82-153 7-90 (247)
292 3svt_A Short-chain type dehydr 57.7 7.3 0.00025 36.7 3.8 71 81-153 10-97 (281)
293 3ew7_A LMO0794 protein; Q8Y8U8 57.5 5.4 0.00019 35.6 2.7 65 83-153 1-67 (221)
294 2glx_A 1,5-anhydro-D-fructose 57.5 6.5 0.00022 38.1 3.5 140 83-228 1-147 (332)
295 3uhf_A Glutamate racemase; str 57.5 1E+02 0.0035 28.9 11.7 87 81-178 23-117 (274)
296 3h2s_A Putative NADH-flavin re 57.5 4.4 0.00015 36.5 2.1 65 83-153 1-68 (224)
297 2rhc_B Actinorhodin polyketide 57.3 13 0.00043 35.0 5.4 70 82-153 22-105 (277)
298 3v8b_A Putative dehydrogenase, 56.9 11 0.00039 35.5 5.0 70 82-153 28-111 (283)
299 2yjn_A ERYCIII, glycosyltransf 56.9 21 0.0007 35.9 7.3 33 81-114 19-56 (441)
300 1lc0_A Biliverdin reductase A; 56.6 20 0.00068 34.0 6.8 111 81-202 6-119 (294)
301 3oti_A CALG3; calicheamicin, T 56.5 24 0.0008 34.8 7.6 38 136-176 119-156 (398)
302 3tl3_A Short-chain type dehydr 56.5 13 0.00046 34.2 5.4 72 81-154 8-86 (257)
303 1hdc_A 3-alpha, 20 beta-hydrox 56.5 10 0.00034 35.1 4.5 70 82-153 5-85 (254)
304 3d3w_A L-xylulose reductase; u 56.4 11 0.00037 34.4 4.7 70 82-153 7-82 (244)
305 3l9w_A Glutathione-regulated p 56.4 15 0.00051 37.0 6.0 87 82-171 4-93 (413)
306 3kkj_A Amine oxidase, flavin-c 56.4 11 0.00036 34.0 4.6 31 83-114 3-33 (336)
307 3gem_A Short chain dehydrogena 56.4 7.9 0.00027 36.1 3.8 70 82-153 27-105 (260)
308 1zem_A Xylitol dehydrogenase; 56.3 14 0.00047 34.3 5.4 71 81-153 6-90 (262)
309 1h5q_A NADP-dependent mannitol 56.3 19 0.00066 33.0 6.5 70 82-153 14-98 (265)
310 4fc7_A Peroxisomal 2,4-dienoyl 56.3 13 0.00045 34.8 5.4 71 81-153 26-111 (277)
311 2gdz_A NAD+-dependent 15-hydro 56.0 12 0.00041 34.7 5.0 71 81-153 6-92 (267)
312 4h15_A Short chain alcohol deh 56.0 56 0.0019 30.3 9.7 69 81-153 10-84 (261)
313 1fmc_A 7 alpha-hydroxysteroid 56.0 9.3 0.00032 35.0 4.2 70 82-153 11-94 (255)
314 1vl8_A Gluconate 5-dehydrogena 55.8 16 0.00055 34.0 5.9 70 82-153 21-105 (267)
315 1uls_A Putative 3-oxoacyl-acyl 55.7 8.9 0.00031 35.2 4.0 70 82-153 5-83 (245)
316 3oig_A Enoyl-[acyl-carrier-pro 55.7 12 0.00043 34.6 5.0 71 81-153 6-93 (266)
317 3lf2_A Short chain oxidoreduct 55.7 18 0.00063 33.5 6.2 71 81-153 7-93 (265)
318 2q2v_A Beta-D-hydroxybutyrate 55.6 22 0.00076 32.6 6.8 70 82-153 4-85 (255)
319 1p9l_A Dihydrodipicolinate red 55.6 62 0.0021 29.8 9.7 30 83-112 1-31 (245)
320 4dry_A 3-oxoacyl-[acyl-carrier 55.6 5.2 0.00018 37.9 2.3 71 81-153 32-117 (281)
321 1nff_A Putative oxidoreductase 55.5 8.1 0.00028 35.9 3.7 71 81-153 6-87 (260)
322 3tsa_A SPNG, NDP-rhamnosyltran 55.4 13 0.00043 36.6 5.3 38 136-176 103-140 (391)
323 3sx2_A Putative 3-ketoacyl-(ac 55.3 15 0.0005 34.4 5.5 33 81-114 12-45 (278)
324 2wsb_A Galactitol dehydrogenas 55.3 8.3 0.00028 35.4 3.7 71 81-153 10-91 (254)
325 1yde_A Retinal dehydrogenase/r 55.3 14 0.00048 34.5 5.4 71 81-153 8-88 (270)
326 3i23_A Oxidoreductase, GFO/IDH 55.2 8.5 0.00029 37.7 3.9 144 82-230 2-152 (349)
327 4imr_A 3-oxoacyl-(acyl-carrier 55.1 17 0.00058 34.1 5.9 33 82-115 33-66 (275)
328 1geg_A Acetoin reductase; SDR 55.0 14 0.00048 34.0 5.3 69 83-153 3-85 (256)
329 1y8q_A Ubiquitin-like 1 activa 55.0 33 0.0011 33.5 8.2 114 82-202 36-153 (346)
330 2pd6_A Estradiol 17-beta-dehyd 55.0 13 0.00044 34.3 5.0 70 82-153 7-98 (264)
331 4eso_A Putative oxidoreductase 54.9 8.6 0.00029 35.7 3.7 71 81-153 7-88 (255)
332 2pd4_A Enoyl-[acyl-carrier-pro 54.9 17 0.00059 33.9 5.9 70 82-153 6-90 (275)
333 3f9i_A 3-oxoacyl-[acyl-carrier 54.7 8.9 0.00031 35.2 3.8 71 81-153 13-90 (249)
334 1wma_A Carbonyl reductase [NAD 54.7 9.7 0.00033 35.2 4.1 70 82-153 4-88 (276)
335 4hv4_A UDP-N-acetylmuramate--L 54.7 12 0.00041 38.7 5.1 33 81-114 21-54 (494)
336 3gaf_A 7-alpha-hydroxysteroid 54.6 12 0.0004 34.7 4.6 71 81-153 11-95 (256)
337 1xq1_A Putative tropinone redu 54.5 15 0.00051 34.0 5.4 71 81-153 13-98 (266)
338 3h5n_A MCCB protein; ubiquitin 54.5 84 0.0029 30.7 11.0 32 82-114 118-149 (353)
339 3moi_A Probable dehydrogenase; 54.5 4.4 0.00015 40.5 1.7 142 82-229 2-150 (387)
340 2x6t_A ADP-L-glycero-D-manno-h 54.4 13 0.00046 36.0 5.3 69 82-153 46-121 (357)
341 3nzo_A UDP-N-acetylglucosamine 54.4 8.9 0.00031 38.3 4.0 70 82-153 35-118 (399)
342 3k1t_A Glutamate--cysteine lig 54.3 16 0.00055 36.1 5.4 53 225-277 280-335 (432)
343 3grp_A 3-oxoacyl-(acyl carrier 54.2 10 0.00035 35.5 4.1 71 81-153 26-107 (266)
344 1zk4_A R-specific alcohol dehy 54.2 9.6 0.00033 34.9 3.9 70 82-153 6-88 (251)
345 1hxh_A 3BETA/17BETA-hydroxyste 54.0 10 0.00035 35.0 4.1 70 82-153 6-86 (253)
346 4dmm_A 3-oxoacyl-[acyl-carrier 53.9 12 0.00041 35.0 4.6 70 82-153 28-112 (269)
347 2hun_A 336AA long hypothetical 53.8 34 0.0012 32.5 8.1 69 82-153 3-81 (336)
348 3lk7_A UDP-N-acetylmuramoylala 53.6 70 0.0024 32.3 10.7 33 81-114 8-40 (451)
349 3u5t_A 3-oxoacyl-[acyl-carrier 53.6 16 0.00054 34.1 5.4 71 81-153 26-111 (267)
350 1zh8_A Oxidoreductase; TM0312, 53.5 11 0.00038 36.7 4.4 117 81-202 17-136 (340)
351 3ehe_A UDP-glucose 4-epimerase 53.5 11 0.00038 35.8 4.4 66 82-153 1-69 (313)
352 2pnf_A 3-oxoacyl-[acyl-carrier 53.4 11 0.00039 34.2 4.3 70 82-153 7-91 (248)
353 3ftp_A 3-oxoacyl-[acyl-carrier 53.2 9.2 0.00032 35.9 3.7 71 81-153 27-111 (270)
354 2uvd_A 3-oxoacyl-(acyl-carrier 53.0 15 0.00053 33.5 5.1 70 82-153 4-88 (246)
355 3otg_A CALG1; calicheamicin, T 53.0 20 0.00069 35.3 6.4 37 137-176 120-156 (412)
356 3rui_A Ubiquitin-like modifier 52.9 72 0.0025 31.0 10.0 31 82-113 34-64 (340)
357 1lss_A TRK system potassium up 52.9 16 0.00056 29.6 4.8 87 82-171 4-94 (140)
358 2vob_A Trypanothione synthetas 52.9 14 0.0005 39.4 5.4 114 163-292 488-610 (652)
359 2p2s_A Putative oxidoreductase 52.9 12 0.0004 36.4 4.5 141 82-228 4-152 (336)
360 4fk1_A Putative thioredoxin re 52.8 37 0.0013 31.9 8.0 35 81-116 5-39 (304)
361 4ibo_A Gluconate dehydrogenase 52.7 10 0.00034 35.6 3.8 70 82-153 26-109 (271)
362 2bka_A CC3, TAT-interacting pr 52.7 8.3 0.00028 35.1 3.2 68 82-153 18-90 (242)
363 3tox_A Short chain dehydrogena 52.7 12 0.00043 35.2 4.5 71 81-153 7-91 (280)
364 3ijp_A DHPR, dihydrodipicolina 52.7 57 0.0019 31.0 9.1 94 77-175 16-116 (288)
365 3pgx_A Carveol dehydrogenase; 52.6 59 0.002 30.2 9.3 33 81-114 14-47 (280)
366 3t4x_A Oxidoreductase, short c 52.4 11 0.00038 35.1 4.1 71 81-153 9-91 (267)
367 3out_A Glutamate racemase; str 52.4 40 0.0014 31.6 8.0 85 82-177 7-100 (268)
368 3guy_A Short-chain dehydrogena 52.3 14 0.0005 33.3 4.8 69 83-153 2-78 (230)
369 2gzm_A Glutamate racemase; enz 52.3 52 0.0018 30.6 8.8 95 83-181 4-99 (267)
370 3ctm_A Carbonyl reductase; alc 52.2 23 0.00079 32.9 6.4 71 81-153 33-117 (279)
371 1ae1_A Tropinone reductase-I; 52.0 19 0.00066 33.5 5.7 71 81-153 20-105 (273)
372 3ioy_A Short-chain dehydrogena 51.9 8.7 0.0003 37.1 3.3 71 81-153 7-93 (319)
373 2bll_A Protein YFBG; decarboxy 51.6 24 0.00083 33.7 6.6 68 83-153 1-73 (345)
374 1spx_A Short-chain reductase f 51.6 16 0.00054 34.1 5.1 70 82-153 6-92 (278)
375 3a28_C L-2.3-butanediol dehydr 51.6 19 0.00064 33.2 5.5 69 83-153 3-87 (258)
376 2c07_A 3-oxoacyl-(acyl-carrier 51.5 16 0.00054 34.3 5.1 70 82-153 44-127 (285)
377 1pjq_A CYSG, siroheme synthase 51.4 16 0.00056 37.2 5.5 84 81-174 11-100 (457)
378 1xhl_A Short-chain dehydrogena 51.4 8.3 0.00028 36.8 3.0 70 82-153 26-112 (297)
379 1xkq_A Short-chain reductase f 51.3 8.4 0.00029 36.2 3.0 70 82-153 6-92 (280)
380 2wyu_A Enoyl-[acyl carrier pro 51.3 16 0.00055 33.8 5.0 70 82-153 8-92 (261)
381 3upl_A Oxidoreductase; rossman 51.3 38 0.0013 34.4 8.0 139 81-227 22-188 (446)
382 2zat_A Dehydrogenase/reductase 51.2 15 0.0005 34.0 4.7 70 82-153 14-97 (260)
383 1nvm_B Acetaldehyde dehydrogen 51.0 19 0.00066 34.7 5.6 98 81-179 3-105 (312)
384 4iiu_A 3-oxoacyl-[acyl-carrier 51.0 15 0.0005 34.2 4.7 70 82-153 26-110 (267)
385 3c85_A Putative glutathione-re 51.0 12 0.00041 32.5 3.9 89 82-171 39-130 (183)
386 4gqa_A NAD binding oxidoreduct 51.0 2.6 9.1E-05 42.4 -0.6 118 79-202 23-150 (412)
387 2gn4_A FLAA1 protein, UDP-GLCN 50.9 13 0.00043 36.3 4.4 74 77-153 16-97 (344)
388 4egf_A L-xylulose reductase; s 50.7 9.6 0.00033 35.6 3.3 71 81-153 19-104 (266)
389 4g65_A TRK system potassium up 50.6 14 0.00047 37.8 4.7 75 81-158 2-80 (461)
390 3oec_A Carveol dehydrogenase ( 50.6 44 0.0015 31.9 8.2 33 81-114 45-78 (317)
391 3ist_A Glutamate racemase; str 50.6 57 0.0019 30.6 8.7 84 83-177 6-97 (269)
392 3op4_A 3-oxoacyl-[acyl-carrier 50.2 15 0.0005 33.8 4.5 71 81-153 8-89 (248)
393 3asu_A Short-chain dehydrogena 50.1 9 0.00031 35.4 3.0 69 83-153 1-80 (248)
394 1xu9_A Corticosteroid 11-beta- 50.0 9.2 0.00032 36.0 3.1 70 82-153 28-112 (286)
395 3i1j_A Oxidoreductase, short c 50.0 21 0.00071 32.5 5.5 72 81-153 13-100 (247)
396 4hb9_A Similarities with proba 50.0 14 0.00046 36.4 4.5 31 83-114 2-32 (412)
397 3rsc_A CALG2; TDP, enediyne, s 50.0 18 0.00063 35.7 5.5 32 82-114 20-56 (415)
398 3cxt_A Dehydrogenase with diff 49.9 22 0.00077 33.6 5.9 70 82-153 34-117 (291)
399 1oi7_A Succinyl-COA synthetase 49.7 1.4E+02 0.0049 28.0 11.5 84 80-173 5-90 (288)
400 3t7c_A Carveol dehydrogenase; 49.6 60 0.0021 30.5 8.9 33 81-114 27-60 (299)
401 1qsg_A Enoyl-[acyl-carrier-pro 49.5 32 0.0011 31.7 6.9 70 82-153 9-93 (265)
402 4g6h_A Rotenone-insensitive NA 49.5 11 0.00037 39.1 3.8 35 81-116 41-75 (502)
403 3q2i_A Dehydrogenase; rossmann 49.3 13 0.00043 36.4 4.1 116 81-202 12-129 (354)
404 3u9l_A 3-oxoacyl-[acyl-carrier 49.3 33 0.0011 33.0 7.1 70 82-153 5-93 (324)
405 2p91_A Enoyl-[acyl-carrier-pro 49.2 21 0.00071 33.5 5.5 70 82-153 21-105 (285)
406 3f4l_A Putative oxidoreductase 49.0 13 0.00045 36.2 4.2 143 82-230 2-152 (345)
407 4da9_A Short-chain dehydrogena 49.0 25 0.00084 33.0 6.0 70 82-153 29-113 (280)
408 2nu8_A Succinyl-COA ligase [AD 49.0 1.5E+02 0.0052 27.8 11.6 85 80-174 5-91 (288)
409 1a9x_B Carbamoyl phosphate syn 48.9 4.7 0.00016 40.2 0.8 21 33-53 337-357 (379)
410 2x9g_A PTR1, pteridine reducta 48.9 20 0.00069 33.6 5.4 70 82-153 23-112 (288)
411 3nrc_A Enoyl-[acyl-carrier-pro 48.9 28 0.00095 32.5 6.3 70 82-153 26-109 (280)
412 1gee_A Glucose 1-dehydrogenase 48.8 13 0.00044 34.2 3.9 70 82-153 7-91 (261)
413 2nwq_A Probable short-chain de 48.3 9.9 0.00034 35.7 3.0 69 83-153 22-103 (272)
414 4fs3_A Enoyl-[acyl-carrier-pro 48.0 36 0.0012 31.3 6.9 71 81-153 5-92 (256)
415 1xgk_A Nitrogen metabolite rep 47.5 38 0.0013 32.9 7.3 68 82-153 5-79 (352)
416 2z1n_A Dehydrogenase; reductas 47.4 23 0.00079 32.6 5.4 71 81-153 6-91 (260)
417 3gdo_A Uncharacterized oxidore 47.4 9.2 0.00032 37.6 2.7 141 81-229 4-151 (358)
418 3ko8_A NAD-dependent epimerase 47.4 11 0.00038 35.7 3.3 65 83-153 1-68 (312)
419 1zuw_A Glutamate racemase 1; ( 47.4 59 0.002 30.4 8.3 95 83-182 4-101 (272)
420 1g0o_A Trihydroxynaphthalene r 47.2 24 0.00082 33.0 5.6 70 82-153 29-113 (283)
421 3uf0_A Short-chain dehydrogena 47.1 26 0.00087 32.8 5.7 70 81-153 30-112 (273)
422 3ezy_A Dehydrogenase; structur 46.9 8.9 0.00031 37.4 2.5 142 82-229 2-150 (344)
423 3r3s_A Oxidoreductase; structu 46.8 28 0.00097 32.8 6.1 71 81-153 48-134 (294)
424 4gkb_A 3-oxoacyl-[acyl-carrier 46.6 62 0.0021 30.0 8.3 71 81-153 6-89 (258)
425 2x5o_A UDP-N-acetylmuramoylala 46.5 1.3E+02 0.0044 30.1 11.3 34 81-115 4-37 (439)
426 4fb5_A Probable oxidoreductase 46.5 19 0.00064 35.4 4.9 142 82-229 25-180 (393)
427 3o26_A Salutaridine reductase; 46.3 12 0.0004 35.4 3.2 33 81-114 11-44 (311)
428 2bd0_A Sepiapterin reductase; 46.2 18 0.00061 32.8 4.4 70 82-153 2-92 (244)
429 3qlj_A Short chain dehydrogena 46.1 18 0.0006 34.8 4.5 71 81-153 26-120 (322)
430 1ja9_A 4HNR, 1,3,6,8-tetrahydr 46.1 17 0.00057 33.6 4.3 71 81-153 20-105 (274)
431 1sby_A Alcohol dehydrogenase; 45.9 25 0.00084 32.2 5.3 70 82-153 5-90 (254)
432 3u3x_A Oxidoreductase; structu 45.8 6.1 0.00021 39.0 1.1 142 81-228 25-174 (361)
433 3v5n_A Oxidoreductase; structu 45.7 16 0.00054 36.7 4.2 146 81-229 36-196 (417)
434 3grk_A Enoyl-(acyl-carrier-pro 45.6 24 0.00083 33.3 5.4 71 81-153 30-115 (293)
435 3ip3_A Oxidoreductase, putativ 45.5 8.1 0.00028 37.6 2.0 141 82-229 2-155 (337)
436 1f06_A MESO-diaminopimelate D- 45.5 28 0.00097 33.5 5.9 88 82-179 3-90 (320)
437 3to5_A CHEY homolog; alpha(5)b 45.3 1.2E+02 0.0043 24.7 10.1 54 80-153 10-63 (134)
438 1c0p_A D-amino acid oxidase; a 45.2 26 0.00089 34.0 5.7 35 81-116 5-39 (363)
439 3cea_A MYO-inositol 2-dehydrog 45.1 40 0.0014 32.5 7.0 89 81-175 7-99 (346)
440 3ppi_A 3-hydroxyacyl-COA dehyd 44.4 13 0.00043 34.9 3.1 70 82-153 30-109 (281)
441 4dgk_A Phytoene dehydrogenase; 44.3 16 0.00053 37.4 4.0 33 82-115 1-33 (501)
442 3tsc_A Putative oxidoreductase 44.1 90 0.0031 28.8 9.1 33 81-114 10-43 (277)
443 1edo_A Beta-keto acyl carrier 44.1 20 0.00069 32.4 4.4 69 83-153 2-85 (244)
444 3dty_A Oxidoreductase, GFO/IDH 43.8 9.9 0.00034 38.0 2.3 146 81-229 11-171 (398)
445 3cty_A Thioredoxin reductase; 43.7 27 0.00093 33.0 5.4 35 80-115 14-48 (319)
446 2rh8_A Anthocyanidin reductase 43.6 23 0.00079 33.9 4.9 31 82-113 9-40 (338)
447 1b73_A Glutamate racemase; iso 43.4 43 0.0015 30.9 6.6 38 141-178 56-93 (254)
448 1oc2_A DTDP-glucose 4,6-dehydr 43.3 54 0.0018 31.3 7.6 69 82-153 4-81 (348)
449 3oz2_A Digeranylgeranylglycero 43.3 19 0.00064 35.1 4.3 32 82-114 4-35 (397)
450 3ksu_A 3-oxoacyl-acyl carrier 43.2 32 0.0011 31.8 5.7 71 81-153 10-97 (262)
451 3r9u_A Thioredoxin reductase; 42.8 23 0.00079 33.2 4.7 34 81-115 3-37 (315)
452 2gek_A Phosphatidylinositol ma 42.7 78 0.0027 30.6 8.8 91 81-175 19-134 (406)
453 1xea_A Oxidoreductase, GFO/IDH 42.7 9.7 0.00033 36.7 2.0 112 82-202 2-117 (323)
454 2ywl_A Thioredoxin reductase r 42.6 31 0.001 29.5 5.2 32 83-115 2-33 (180)
455 4fzr_A SSFS6; structural genom 42.4 20 0.00067 35.3 4.3 35 138-175 114-148 (398)
456 3vh1_A Ubiquitin-like modifier 42.3 1.3E+02 0.0044 31.7 10.5 31 82-113 327-357 (598)
457 1y56_B Sarcosine oxidase; dehy 42.3 26 0.00089 34.1 5.2 35 81-116 4-38 (382)
458 3icc_A Putative 3-oxoacyl-(acy 42.3 27 0.00092 31.9 5.0 34 79-113 4-38 (255)
459 3e8x_A Putative NAD-dependent 42.0 26 0.00088 31.6 4.7 35 80-115 19-54 (236)
460 2we8_A Xanthine dehydrogenase; 41.9 1.2E+02 0.0042 30.0 9.9 34 81-115 203-236 (386)
461 4a5l_A Thioredoxin reductase; 41.8 24 0.00081 33.2 4.6 34 81-115 3-36 (314)
462 1mxh_A Pteridine reductase 2; 41.6 18 0.0006 33.7 3.6 32 82-114 11-43 (276)
463 2vvt_A Glutamate racemase; iso 41.5 1.2E+02 0.0043 28.4 9.7 41 141-181 80-120 (290)
464 4fn4_A Short chain dehydrogena 41.3 57 0.002 30.2 7.1 70 82-153 7-90 (254)
465 1jtv_A 17 beta-hydroxysteroid 41.2 41 0.0014 32.3 6.3 70 82-153 2-89 (327)
466 3u7q_A Nitrogenase molybdenum- 41.2 43 0.0015 34.5 6.7 86 82-175 348-439 (492)
467 1ryi_A Glycine oxidase; flavop 41.2 29 0.001 33.7 5.4 35 81-116 16-50 (382)
468 4gsl_A Ubiquitin-like modifier 41.2 1.1E+02 0.0036 32.4 9.7 70 82-152 326-398 (615)
469 1r6d_A TDP-glucose-4,6-dehydra 41.1 68 0.0023 30.4 8.0 68 83-153 1-82 (337)
470 3ohs_X Trans-1,2-dihydrobenzen 40.7 14 0.00046 35.9 2.7 142 82-229 2-152 (334)
471 1u7z_A Coenzyme A biosynthesis 40.7 75 0.0026 28.9 7.5 58 91-153 34-93 (226)
472 2jfn_A Glutamate racemase; cel 40.6 1E+02 0.0035 28.9 8.9 96 81-180 20-117 (285)
473 2oho_A Glutamate racemase; iso 40.6 1.7E+02 0.0059 27.1 10.5 38 141-178 68-105 (273)
474 2a35_A Hypothetical protein PA 40.5 8.9 0.00031 34.0 1.3 31 82-113 5-38 (215)
475 3dme_A Conserved exported prot 40.3 27 0.00093 33.5 4.9 33 82-115 4-36 (369)
476 2zbw_A Thioredoxin reductase; 40.0 31 0.0011 32.8 5.2 34 81-115 4-37 (335)
477 3aek_A Light-independent proto 39.9 97 0.0033 31.2 9.1 86 82-175 307-399 (437)
478 2aef_A Calcium-gated potassium 39.8 21 0.00071 32.4 3.7 88 81-172 8-97 (234)
479 3f8d_A Thioredoxin reductase ( 39.3 29 0.00099 32.6 4.8 33 82-115 15-47 (323)
480 2oln_A NIKD protein; flavoprot 39.3 32 0.0011 33.7 5.3 34 82-116 4-37 (397)
481 2qq5_A DHRS1, dehydrogenase/re 39.2 25 0.00084 32.4 4.2 71 82-154 5-90 (260)
482 3ia7_A CALG4; glycosysltransfe 39.1 28 0.00096 33.9 4.9 31 83-114 5-40 (402)
483 3tqi_A GMP synthase [glutamine 39.0 11 0.00036 39.5 1.7 21 33-53 169-189 (527)
484 3u7q_B Nitrogenase molybdenum- 38.9 1.1E+02 0.0039 31.6 9.5 93 82-175 364-467 (523)
485 2ekp_A 2-deoxy-D-gluconate 3-d 38.8 21 0.0007 32.5 3.5 69 83-153 3-76 (239)
486 2ph3_A 3-oxoacyl-[acyl carrier 38.7 22 0.00075 32.2 3.7 69 83-153 2-86 (245)
487 3rp8_A Flavoprotein monooxygen 38.5 29 0.001 34.3 4.9 34 81-115 22-55 (407)
488 2zcu_A Uncharacterized oxidore 38.5 40 0.0014 31.1 5.6 67 84-153 1-71 (286)
489 2ixa_A Alpha-N-acetylgalactosa 38.3 23 0.00079 35.9 4.1 117 81-202 19-145 (444)
490 1f0k_A MURG, UDP-N-acetylgluco 38.3 1.1E+02 0.0039 28.9 9.1 38 137-175 86-123 (364)
491 2dwu_A Glutamate racemase; iso 38.1 68 0.0023 30.0 7.2 85 83-178 8-100 (276)
492 3lzw_A Ferredoxin--NADP reduct 38.0 30 0.001 32.7 4.7 33 82-115 7-39 (332)
493 3kzx_A HAD-superfamily hydrola 37.9 1.1E+02 0.0038 26.6 8.4 116 135-255 107-229 (231)
494 2gf3_A MSOX, monomeric sarcosi 37.6 34 0.0012 33.3 5.1 34 82-116 3-36 (389)
495 4fgs_A Probable dehydrogenase 37.6 36 0.0012 32.1 5.0 32 82-114 29-61 (273)
496 1vli_A Spore coat polysacchari 37.3 1.6E+02 0.0055 29.0 9.8 82 155-256 99-182 (385)
497 3m9w_A D-xylose-binding peripl 37.1 53 0.0018 30.8 6.3 38 138-175 49-87 (313)
498 3itj_A Thioredoxin reductase 1 37.0 27 0.00092 33.1 4.2 33 81-114 21-53 (338)
499 3hn7_A UDP-N-acetylmuramate-L- 36.8 1.3E+02 0.0046 30.9 9.8 35 80-115 17-52 (524)
500 3l6u_A ABC-type sugar transpor 36.7 50 0.0017 30.4 6.0 38 138-175 55-93 (293)
No 1
>3mjf_A Phosphoribosylamine--glycine ligase; structural genomics, CEN structural genomics of infectious diseases, csgid; HET: MSE PGE; 1.47A {Yersinia pestis} PDB: 1gso_A
Probab=100.00 E-value=1.6e-67 Score=551.58 Aligned_cols=427 Identities=52% Similarity=0.883 Sum_probs=386.9
Q ss_pred ccEEEEEeCChhHHHHHHHHHhcCCCcEEEEecCCCCCcCCCCCccccCCCCCCHHHHHHHHHHcCCcEEEECCChhhHH
Q 010065 82 RVVVLVIGGGGREHALCYALKRSHSCDAVFCAPGNAGISNSGDATCIPDLDVLDGDAVISFCRKWSVGLVVVGPEAPLVS 161 (519)
Q Consensus 82 ~~~vliiG~g~~~~~l~~~l~~~~g~~~v~~~~~~~~~~~~~~~~~v~~~d~~d~~~l~~~~~~~~id~Vi~g~E~~~~~ 161 (519)
+|||||||+|+++|+++|+++++.++..+++.|+|+++...+....+ .++..|.+.++++++++++|+|+++.|+.++.
T Consensus 3 ~mkvlviG~ggre~ala~~l~~s~~v~~v~~~pgn~g~~~~~~~~~~-~~~~~d~~~l~~~a~~~~id~vv~g~e~~l~~ 81 (431)
T 3mjf_A 3 AMNILIIGNGGREHALGWKAAQSPLADKIYVAPGNAGTALEPTLENV-DIAATDIAGLLAFAQSHDIGLTIVGPEAPLVI 81 (431)
T ss_dssp CEEEEEEECSHHHHHHHHHHTTCTTEEEEEEEECCHHHHHCTTCEEC-CCCTTCHHHHHHHHHHTTEEEEEECSHHHHHT
T ss_pred CcEEEEECCCHHHHHHHHHHHhCCCCCEEEEECCCHHHhhhccccee-cCCcCCHHHHHHHHHHhCcCEEEECCchHHHH
Confidence 58999999999999999999998777888888988876544332334 67889999999999999999999999998877
Q ss_pred HHHHHHHHCCCCeeCCcHHHHHHhcCHHHHHHHHHHcCCCCCCeeecCCHHHHHHHHHHhCCCEEEEeCCCCCCCcEEEe
Q 010065 162 GLANKLVKAGIPTFGPSSEAAALEGSKNFMKNLCDKYGIPTAKYKTFTDPNAAKQYIQEEGAPIVVKADGLAAGKGVIVA 241 (519)
Q Consensus 162 ~~a~~le~~gip~~g~~~~~~~~~~dK~~~k~~l~~~Gi~~p~~~~v~~~~~~~~~~~~~g~P~VvKP~~g~gs~GV~~v 241 (519)
.+++.|+.+|+|++|++.+++.+++||..+|++|+++|||+|++..+++.+++.+++++++||+|+||..+++|+||.++
T Consensus 82 ~~~~~l~~~Gi~~~Gp~~~a~~~~~dK~~~k~~l~~~GIptp~~~~~~~~~ea~~~~~~~g~PvVvKp~~~~gg~GV~iv 161 (431)
T 3mjf_A 82 GVVDAFRAAGLAIFGPTQAAAQLEGSKAFTKDFLARHNIPSAEYQNFTDVEAALAYVRQKGAPIVIKADGLAAGKGVIVA 161 (431)
T ss_dssp THHHHHHHTTCCEESCCHHHHHHHHCHHHHHHHHHHTTCSBCCEEEESCHHHHHHHHHHHCSSEEEEESSSCTTCSEEEE
T ss_pred HHHHHHHhcCCCeeCCCHHHHHHhhCHHHHHHHHHHcCCCCCCeEeeCCHHHHHHHHHHcCCeEEEEECCCCCCCcEEEe
Confidence 78899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHhhccCCCCCCcEEEEeccCCcEEEEEEEEeCCeeEEeccccccccccCCCCCCCCCCceEEecCCC
Q 010065 242 MTLEEAYEAVDSMLLKNAFGSAGCRVIIEEFLEGEEASFFALVDGENAIPLESAQDHKRVGDGDTGPNTGGMGAYSPAPV 321 (519)
Q Consensus 242 ~~~~el~~a~~~~~~~~~~~~~~~~~lvEe~I~G~E~sv~~l~dg~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~P~~~ 321 (519)
++.+|+.++++.++....|+..+..++|||||+|+|+++.+++||+.++++...+.+++.++++.++++|+++++.|++.
T Consensus 162 ~~~~el~~a~~~~~~~~~~g~~~~~vlvEe~i~G~E~sv~~~~dg~~~~~~~~~~~~~~~~~~~~g~~~gg~g~~~P~~~ 241 (431)
T 3mjf_A 162 MTQEEAETAVNDMLAGNAFGDAGHRIVVEEFLDGEEASFIVMVDGENVLPMATSQDHKRVGDGDTGPNTGGMGAYSPAPV 241 (431)
T ss_dssp CSHHHHHHHHHHHHTTHHHHCCCCCEEEEECCCSEEEEEEEEEESSCEEECCCBEECCEEETTTEEEECSCSEEEESCTT
T ss_pred CCHHHHHHHHHHHHhhccccCCCCeEEEEEeeCCcEEEEEEEEcCCEEEEEEeeEeceecccCCCCCCCCCceEEeeCCC
Confidence 99999999999887433343345789999999999999999999887777777778888999999999999999999987
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHHcCCCeeeEEEEEEEEEcCCCceEEEEEeCCCCCCchHHHHHHhCCCHHHHHHHHHhC
Q 010065 322 LTKELQSVVMESIILPTVKGMSAEGCKFVGVLYAGLMIEKKSGLPKLIEYNVRFGDPECQVLMVRLESDLAEVLLAACRG 401 (519)
Q Consensus 322 l~~~~~~~i~~~a~~~~~~~~~a~g~~~~G~~~vdf~~~~~g~~~~viEiN~R~G~~~~~~~~~~~G~d~~~~~i~~~~g 401 (519)
++++..+++.+.+++.+.+++.++|++|+|++|+||+++++| ++|++|+|+|||++....+++.+|.|+.+++++++.|
T Consensus 242 l~~~~~~~i~~~i~~~~~~~~~~~g~~~~G~~~ve~~~~~~g-~~~viEiN~R~G~~~~~~i~~~~g~dl~~~~~~~~~G 320 (431)
T 3mjf_A 242 VTDDVHQRVMDQVIWPTVRGMAAEGNIYTGFLYAGLMISADG-QPKVIEFNCRFGDPETQPIMLRMRSDLVELCLAGTQG 320 (431)
T ss_dssp SCHHHHHHHHHHTHHHHHHHHHHTTCCCEEEEEEEEEECTTS-CEEEEEECGGGSTTTHHHHHHHBCSCHHHHHHHHHTT
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHcCCCcEEEEEEEEEEeCCC-CeEEEEEecCCCCcHHHHHHHHHCCCHHHHHHHHHcC
Confidence 899999999998888888999999999899999999999877 8999999999998888778888999999999999999
Q ss_pred CCCCCCcccCCCcEEEEEEecCCCCCCCCCCcccccchhhhccCCCeEEEEeeeeecCCC-cEEecCCeEEEEEEecCCH
Q 010065 402 ELTGVTLNWSPGSAMVVVMASKGYPGSYEKGSEIQNLEEAEQVAPSVKIFHAGTALDADG-NFIATGGRVLGVTAKGKDV 480 (519)
Q Consensus 402 ~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~g-~~~~~~~rvg~vi~~g~t~ 480 (519)
++++.++.|.+.++++++++++|||..+.++..|.+++++.. +++.+||++... ..| .+.++++|+++|++.|+|.
T Consensus 321 ~l~~~~~~~~~~~a~~vv~a~~gyp~~~~~g~~i~~~~~~~~--~~~~~~~ag~~~-~~~~~~~~~ggRv~~v~~~g~~~ 397 (431)
T 3mjf_A 321 KLNEKTSDWDERPSLGVVLAAGGYPADYRQGDVIHGLPQQEV--KDGKVFHAGTKL-NGNHEVVTNGGRVLCVTALGETV 397 (431)
T ss_dssp CGGGCCCCBCSSCEEEEEEEETTTTSCCCCCCBCBCCCSSCB--TTEEEEESSEEE-CTTSCEEECSSEEEEEEEECSSH
T ss_pred CCCCCCccccCCcEEEEEecCCCcCccCCCCCEeeCCccccC--CCcEEEEeeeEe-cCCCEEEecCCeEEEEEEecCCH
Confidence 988878888888999999999999999999999999987532 588999998876 466 9999999999999999999
Q ss_pred HHHHHHHHHHhhccccCCeeecccccccccccc
Q 010065 481 EEAQDRAYLAVEEINWPGGFYRRDIGWRALPQK 513 (519)
Q Consensus 481 ~ea~~~a~~~~~~i~~~g~~~r~dig~~~~~~~ 513 (519)
++|+++|+++++.|+|+|.|||+|||.+.+..+
T Consensus 398 ~~A~~~a~~~~~~i~~~~~~~r~dig~~~~~~~ 430 (431)
T 3mjf_A 398 AQAQQYAYQLAEGIQWEGVFCRKDIGYRAIARG 430 (431)
T ss_dssp HHHHHHHHHHHTTCBCTTEECCSCTTHHHHTTT
T ss_pred HHHHHHHHHHhccCCCCCceeehhhHHHHHhcc
Confidence 999999999999999999999999999887543
No 2
>3lp8_A Phosphoribosylamine-glycine ligase; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ALS collaborative crystallography; 2.15A {Ehrlichia chaffeensis}
Probab=100.00 E-value=5.1e-66 Score=541.55 Aligned_cols=423 Identities=48% Similarity=0.860 Sum_probs=383.6
Q ss_pred CccEEEEEeCChhHHHHHHHHHhcCCCcEEEEecCCCCCcCCCCCccccCCCCCCHHHHHHHHHHcCCcEEEECCChhhH
Q 010065 81 QRVVVLVIGGGGREHALCYALKRSHSCDAVFCAPGNAGISNSGDATCIPDLDVLDGDAVISFCRKWSVGLVVVGPEAPLV 160 (519)
Q Consensus 81 ~~~~vliiG~g~~~~~l~~~l~~~~g~~~v~~~~~~~~~~~~~~~~~v~~~d~~d~~~l~~~~~~~~id~Vi~g~E~~~~ 160 (519)
.+|||||||+|+++++++|+++++.++..+++.|+|++....+ ..+ .++..|.+.++++++++++|+|+++.|+.++
T Consensus 20 ~~m~ilvlG~ggre~ala~~l~~s~~v~~v~~~pgn~g~~~~~--~~~-~i~~~d~~~l~~~a~~~~id~vv~g~E~~l~ 96 (442)
T 3lp8_A 20 GSMNVLVIGSGGREHSMLHHIRKSTLLNKLFIAPGREGMSGLA--DII-DIDINSTIEVIQVCKKEKIELVVIGPETPLM 96 (442)
T ss_dssp CCEEEEEEECSHHHHHHHHHHTTCTTEEEEEEEECCGGGTTTS--EEC-CCCTTCHHHHHHHHHHTTCCEEEECSHHHHH
T ss_pred CCCEEEEECCChHHHHHHHHHHhCCCCCEEEEECCChHHhhcc--cee-ecCcCCHHHHHHHHHHhCCCEEEECCcHHHH
Confidence 3689999999999999999999998888888999988766442 233 6788999999999999999999999999987
Q ss_pred HHHHHHHHHCCCCeeCCcHHHHHHhcCHHHHHHHHHHcCCCCCCeeecCCHHHHHHHHHHhCCCEEEEeCCCCCCCcEEE
Q 010065 161 SGLANKLVKAGIPTFGPSSEAAALEGSKNFMKNLCDKYGIPTAKYKTFTDPNAAKQYIQEEGAPIVVKADGLAAGKGVIV 240 (519)
Q Consensus 161 ~~~a~~le~~gip~~g~~~~~~~~~~dK~~~k~~l~~~Gi~~p~~~~v~~~~~~~~~~~~~g~P~VvKP~~g~gs~GV~~ 240 (519)
.++++.++++|+|++|++.+++.+++||..+|++|+++|||+|++..+++.+++.+++++++||+|+||..+++|+||.+
T Consensus 97 ~~~~~~l~~~Gi~~~Gp~~~a~~~~~dK~~~k~~l~~~GIp~p~~~~~~~~~ea~~~~~~~g~PvVvKp~~~~gg~GV~i 176 (442)
T 3lp8_A 97 NGLSDALTEEGILVFGPSKAAARLESSKGFTKELCMRYGIPTAKYGYFVDTNSAYKFIDKHKLPLVVKADGLAQGKGTVI 176 (442)
T ss_dssp TTHHHHHHHTTCEEESCCHHHHHHHHCHHHHHHHHHHHTCCBCCEEEESSHHHHHHHHHHSCSSEEEEESSCCTTTSEEE
T ss_pred HHHHHHHHhcCCcEecCCHHHHHHhhCHHHHHHHHHHCCCCCCCEEEECCHHHHHHHHHHcCCcEEEeECCCCCCCeEEE
Confidence 78889999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eCCHHHHHHHHHHHHhhccCCCCCCcEEEEeccCCcEEEEEEEEeCCeeEEeccccccccccCCCCCCCCCCceEEecCC
Q 010065 241 AMTLEEAYEAVDSMLLKNAFGSAGCRVIIEEFLEGEEASFFALVDGENAIPLESAQDHKRVGDGDTGPNTGGMGAYSPAP 320 (519)
Q Consensus 241 v~~~~el~~a~~~~~~~~~~~~~~~~~lvEe~I~G~E~sv~~l~dg~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~P~~ 320 (519)
+++.+|+.++++.++....|+..+..++|||||+|+|+++.+++||+.++++...+.+++.++++.++++|+++++.|++
T Consensus 177 v~~~eel~~a~~~~~~~~~~g~~~~~vlvEe~i~G~E~sv~~~~dg~~~~~~~~~~~~~~~~~~~~g~~~gg~g~~~P~~ 256 (442)
T 3lp8_A 177 CHTHEEAYNAVDAMLVHHKFGEAGCAIIIEEFLEGKEISFFTLVDGSNPVILGVAQDYKTIGDNNKGPNTGGMGSYSKPN 256 (442)
T ss_dssp ESSHHHHHHHHHHHHTSCTTGGGGSSEEEEECCCSEEEEEEEEEESSCEEEEEEEEECCEEEGGGEEEECSCSEEEECTT
T ss_pred eCCHHHHHHHHHHHHhhcccCCCCCeEEEEEeecCcEEEEEEEECCCeEEEeEEeEeeeecccCCCCCCCCCcEEEeeCC
Confidence 99999999999998754344333468999999999999999999988777777777778888888899999999999998
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHHHcCCCeeeEEEEEEEEEcCCCceEEEEEeCCCCCCchHHHHHHhCCCHHHHHHHHHh
Q 010065 321 VLTKELQSVVMESIILPTVKGMSAEGCKFVGVLYAGLMIEKKSGLPKLIEYNVRFGDPECQVLMVRLESDLAEVLLAACR 400 (519)
Q Consensus 321 ~l~~~~~~~i~~~a~~~~~~~~~a~g~~~~G~~~vdf~~~~~g~~~~viEiN~R~G~~~~~~~~~~~G~d~~~~~i~~~~ 400 (519)
.++++..+++.+.+++.+.+++.++|++|+|++++||+++++| +||+|+|+|||++.++.+++.++.|+.+++++++.
T Consensus 257 ~l~~~~~~~i~~~i~~~a~~~~~a~g~~~~G~~~ve~~~~~~g--~~viEiN~R~g~~~~~~~~~~~~~dl~~~~~~~~~ 334 (442)
T 3lp8_A 257 IITQEMEHIIIQKIIYPTIKAMFNMNIQFRGLLFAGIIIKKNE--PKLLEYNVRFGDPETQSILPRLNSDFLKLLSLTAK 334 (442)
T ss_dssp SSCHHHHHHHHHHTHHHHHHHHHHTTCCCEEEEEEEEEEETTE--EEEEEEESSCCTTHHHHHGGGBCSCHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHcCCCceeEEEEEEEEeCCC--eEEEEEecCCCCCchhhhHHHhCCCHHHHHHHHHc
Confidence 7899999999998777788999999999889999999999988 99999999999999888888889999999999999
Q ss_pred CCCCCCCcccCCCcEEEEEEecCCCCCCCCCCcccccchhhhccCCCeEEEEeeeeecCCCcEEecCCeEEEEEEecCCH
Q 010065 401 GELTGVTLNWSPGSAMVVVMASKGYPGSYEKGSEIQNLEEAEQVAPSVKIFHAGTALDADGNFIATGGRVLGVTAKGKDV 480 (519)
Q Consensus 401 g~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~rvg~vi~~g~t~ 480 (519)
|++++.++.|.+.+++++++++.+||..+.++..|.+++++.+ .+++.+||.++.. ..|++.++++|+++|++.|+|.
T Consensus 335 G~l~~~~~~~~~~~a~~vv~a~~gyp~~~~~g~~i~g~~~~~~-~~~~~~~~ag~~~-~~~~~~~~ggRv~~v~~~g~~~ 412 (442)
T 3lp8_A 335 GKLGNESVELSKKAALCVVVASRGYPGEYKKNSIINGIENIEK-LPNVQLLHAGTRR-EGNNWVSDSGRVINVVAQGENL 412 (442)
T ss_dssp TCCSSCCCCBCSCEEEEEEEEETTTTSSCCSSCEEBSHHHHHT-CSSEEEEESSEEE-ETTEEEECSSEEEEEEEEESSH
T ss_pred CCCCCCCceeccCcEEEEEEccCCCCCCCCCCCEeeCCccccc-CCCcEEEEeeeec-cCCeEEecCCeEEEEEEecCCH
Confidence 9988888889888899999999999999989999999987643 4678899998876 4789999999999999999999
Q ss_pred HHHHHHHHHHhhccccCCeeeccccccccc
Q 010065 481 EEAQDRAYLAVEEINWPGGFYRRDIGWRAL 510 (519)
Q Consensus 481 ~ea~~~a~~~~~~i~~~g~~~r~dig~~~~ 510 (519)
++|+++|+++++.|+|+|.+||+|||.+.+
T Consensus 413 ~~A~~~a~~~~~~i~~~~~~~r~dig~~~~ 442 (442)
T 3lp8_A 413 ASAKHQAYAALDLLDWPDGIYRYDIGSCAL 442 (442)
T ss_dssp HHHHHHHHHHHTTCBCTTEECCSCTTCC--
T ss_pred HHHHHHHHHHhcccCCCCCcccCccCcccC
Confidence 999999999999999999999999998764
No 3
>2yrx_A Phosphoribosylglycinamide synthetase; glycinamide ribonucleotide synthetase, GAR synthetase; HET: AMP; 1.90A {Geobacillus kaustophilus} PDB: 2yrw_A* 2ys6_A* 2ys7_A
Probab=100.00 E-value=8.5e-59 Score=489.44 Aligned_cols=426 Identities=49% Similarity=0.858 Sum_probs=357.9
Q ss_pred cCCCCCC--CccEEEEEeCChhHHHHHHHHHhcCCCcEEEEecCCCCCcCCCCCccccCCCCCCHHHHHHHHHHcCCcEE
Q 010065 74 NAPTNAG--QRVVVLVIGGGGREHALCYALKRSHSCDAVFCAPGNAGISNSGDATCIPDLDVLDGDAVISFCRKWSVGLV 151 (519)
Q Consensus 74 ~s~~~~~--~~~~vliiG~g~~~~~l~~~l~~~~g~~~v~~~~~~~~~~~~~~~~~v~~~d~~d~~~l~~~~~~~~id~V 151 (519)
.|+.+++ .+++|||+|+|+++++++++++++.|++++++++.|++....+ +.+ ..|+.|.+.++++++++++|+|
T Consensus 11 ~~~~~~~~~~~~~iliiG~g~r~~a~a~~~~~~~g~~~v~~~~~~~~~~~~~--~~~-~~~~~d~~~l~~~~~~~~~d~v 87 (451)
T 2yrx_A 11 SSGENLYFQSHMNVLVIGRGGREHAIAWKAAQSPLVGKLYVAPGNPGIADVA--ELV-HIDELDIEALVQFAKQQAIDLT 87 (451)
T ss_dssp ----CCCCCSSEEEEEEECSHHHHHHHHHHHTCTTEEEEEEEECCTTGGGTS--EEC-CCCTTCHHHHHHHHHHTTCSEE
T ss_pred ccccccccCCCCEEEEECCCHHHHHHHHHHHhcCCCCEEEEECCChhhhhhC--cee-ccCCCCHHHHHHHHHHcCCCEE
Confidence 3666664 4689999999999999999998888999888888777654432 234 5788899999999999999999
Q ss_pred EECCChhhHHHHHHHHHHCCCCeeCCcHHHHHHhcCHHHHHHHHHHcCCCCCCeeecCCHHHHHHHHHHhCCCEEEEeCC
Q 010065 152 VVGPEAPLVSGLANKLVKAGIPTFGPSSEAAALEGSKNFMKNLCDKYGIPTAKYKTFTDPNAAKQYIQEEGAPIVVKADG 231 (519)
Q Consensus 152 i~g~E~~~~~~~a~~le~~gip~~g~~~~~~~~~~dK~~~k~~l~~~Gi~~p~~~~v~~~~~~~~~~~~~g~P~VvKP~~ 231 (519)
+++.|+.++..+++.++.+|+|++|++++++.+++||..++++|+++|||+|++..+++.+++.+++++++||+|+||..
T Consensus 88 i~~~E~~~~~~~~~~l~~~gi~~~g~~~~~~~~~~dK~~~k~~l~~~gip~p~~~~~~~~~~~~~~~~~~~~PvVvKp~~ 167 (451)
T 2yrx_A 88 IVGPEAPLASGIVDRFMAEGLRIFGPSQRAALIEGSKAFAKELMKKYGIPTADHAAFTSYEEAKAYIEQKGAPIVIKADG 167 (451)
T ss_dssp EECSHHHHHTTHHHHHHHTTCCEESCCHHHHHHHHCHHHHHHHHHHTTCCBCCEEEESCHHHHHHHHHHHCSSEEEEECC
T ss_pred EECCchHHHHHHHHHHHHCCCCEeCccHHHHHHhhCHHHHHHHHHHcCCCCCCeEEECCHHHHHHHHHhcCCcEEEEeCC
Confidence 99999887667788899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCcEEEeCCHHHHHHHHHHHHhhccCCCCCCcEEEEeccCCcEEEEEEEEeCCeeEEeccccccccccCCCCCCCCC
Q 010065 232 LAAGKGVIVAMTLEEAYEAVDSMLLKNAFGSAGCRVIIEEFLEGEEASFFALVDGENAIPLESAQDHKRVGDGDTGPNTG 311 (519)
Q Consensus 232 g~gs~GV~~v~~~~el~~a~~~~~~~~~~~~~~~~~lvEe~I~G~E~sv~~l~dg~~~~~~~~~~~~~~~~~~~~~~~~g 311 (519)
+++|+||.++++.+|+.++++.++....|+.....++|||||+|+|+++.+++||+.+.++...+.+++.++++.+++++
T Consensus 168 ~~gg~Gv~~v~~~~el~~~~~~~~~~~~~g~~~~~~lvEe~i~G~E~sv~~~~dG~~~~~~~~~~~~~~~~~~~~~~~~g 247 (451)
T 2yrx_A 168 LAAGKGVTVAQTVEEALAAAKAALVDGQFGTAGSQVVIEEYLEGEEFSFMAFVNGEKVYPLAIAQDHKRAYDGDEGPNTG 247 (451)
T ss_dssp ----CCEEEESSHHHHHHHHHHHHHHSCCBTTBCCEEEEECCCSEEEEEEEEEETTEEEECCCBEECCEEETTTEEEECS
T ss_pred CCCCCcEEEECCHHHHHHHHHHHHhccccCCCCCeEEEEECCcCcEEEEEEEEcCCEEEEeeeEEeccccccCCCCCCCC
Confidence 99999999999999999999888754334333478999999999999999999888656555555566777777788999
Q ss_pred CceEEecCCCCCHHHHHHHHHHHHHHHHHHHHHcCCCeeeEEEEEEEEEcCCCceEEEEEeCCCCCCchHHHHHHhCCCH
Q 010065 312 GMGAYSPAPVLTKELQSVVMESIILPTVKGMSAEGCKFVGVLYAGLMIEKKSGLPKLIEYNVRFGDPECQVLMVRLESDL 391 (519)
Q Consensus 312 ~~~~~~P~~~l~~~~~~~i~~~a~~~~~~~~~a~g~~~~G~~~vdf~~~~~g~~~~viEiN~R~G~~~~~~~~~~~G~d~ 391 (519)
+++++.|++.+++++.+++.+.+.+.+.+++.++|++|.|++++||+++++| +||+|+|||+|++.++.+.+.+|+|+
T Consensus 248 ~~~~~~p~~~l~~~~~~~~~~~~~~~~~~~l~~~g~~~~G~~~ve~~~~~~g--~~viEiN~R~g~~~~~~i~~~~g~d~ 325 (451)
T 2yrx_A 248 GMGAYSPVPQISDEMMDAALEAILRPAAKALAAEGRPFLGVLYAGLMATANG--PKVIEFNARFGDPEAQVVLPRLKTDL 325 (451)
T ss_dssp CSEEEESCTTSCHHHHHHHHHHTHHHHHHHHHHTTCCCEEEEEEEEEEETTE--EEEEEEESSCCTTHHHHHGGGBCSCH
T ss_pred CCeEEccCCCCCHHHHHHHHHHHHHHHHHHHHHcCCCceeEEEEEEEEeCCC--cEEEEEecCCCCcHHHHHHHHcCCCH
Confidence 9999999876899888888554555566777888988889999999999987 99999999999988766667789999
Q ss_pred HHHHHHHHhCCCCCCCcccCCCcEEEEEEecCCCCCCCCCCcccccchhhhccCCCeEEEEeeeeecCCCcEEecCCeEE
Q 010065 392 AEVLLAACRGELTGVTLNWSPGSAMVVVMASKGYPGSYEKGSEIQNLEEAEQVAPSVKIFHAGTALDADGNFIATGGRVL 471 (519)
Q Consensus 392 ~~~~i~~~~g~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~rvg 471 (519)
.+++++++.|.+++. .+.++.++.++++.++||..+.++..+.+++++ . +++.+++.|... ..+...++++|++
T Consensus 326 ~~~~~~~~~g~~~~~--~~~~~~~~~~~l~~~g~p~~~~~g~~i~~~~~~-~--~~~~v~~~G~~~-~~~~~~~~~~rvg 399 (451)
T 2yrx_A 326 VEAVLAVMDGKELEL--EWTDEAVLGVVLAAKGYPGAYERGAEIRGLDRI-S--PDALLFHAGTKR-EGGAWYTNGGRVL 399 (451)
T ss_dssp HHHHHHHHTTCCCCC--CBCSSEEEEEEEEETTTTSSCCCCCEEBCGGGS-C--TTSEEEESSEEE-ETTEEEECSSEEE
T ss_pred HHHHHHHhcCCCCCc--cccCCceEEEEEecCCcCCCCCCCCcCcCcccc-C--CCCEEEeCcccc-cCCeEEcCCCeEE
Confidence 999999999987643 455556778888888898877777778888775 2 567778877765 3566788999999
Q ss_pred EEEEecCCHHHHHHHHHHHhhccccCCeeeccccccccc
Q 010065 472 GVTAKGKDVEEAQDRAYLAVEEINWPGGFYRRDIGWRAL 510 (519)
Q Consensus 472 ~vi~~g~t~~ea~~~a~~~~~~i~~~g~~~r~dig~~~~ 510 (519)
+|++.|+|.++|+++++++++.|+++|.|||+|||.+++
T Consensus 400 ~v~~~g~~~~ea~~~~~~~~~~i~~~~~~~r~dig~~~~ 438 (451)
T 2yrx_A 400 LLAAKGETLAKAKEKAYEQLAAIDCDGLFYRRDIGRRAI 438 (451)
T ss_dssp EEEEEESSHHHHHHHHHHHHTTCBCTTEECCSCTTTTTC
T ss_pred EEEEEeCCHHHHHHHHHHHhhccccCCeEechhhhhHHH
Confidence 999999999999999999999999999999999999886
No 4
>2ip4_A PURD, phosphoribosylamine--glycine ligase; GAR synthetase, purine nucleotid structural genomics, NPPSFA; 2.80A {Thermus thermophilus}
Probab=100.00 E-value=2.1e-58 Score=481.92 Aligned_cols=412 Identities=47% Similarity=0.811 Sum_probs=354.0
Q ss_pred cEEEEEeCChhHHHHHHHHHhcCCCcEEEEecCCCCCcCCCCCccccCCCCCCHHHHHHHHHHcCCcEEEECCChhhHHH
Q 010065 83 VVVLVIGGGGREHALCYALKRSHSCDAVFCAPGNAGISNSGDATCIPDLDVLDGDAVISFCRKWSVGLVVVGPEAPLVSG 162 (519)
Q Consensus 83 ~~vliiG~g~~~~~l~~~l~~~~g~~~v~~~~~~~~~~~~~~~~~v~~~d~~d~~~l~~~~~~~~id~Vi~g~E~~~~~~ 162 (519)
|||||+|+|+++++++++++++.|++++++++.+++....+ +.+ . +..|.+.++++++++++|+|+++.|+.+...
T Consensus 1 mkililG~g~r~~a~a~~l~~~~g~~~v~~~~~~~~~~~~~--~~~-~-~~~d~~~l~~~~~~~~~d~v~~~~E~~~~~~ 76 (417)
T 2ip4_A 1 MKVLVVGSGGREHALLWKAAQSPRVKRLYAAPGNAGMEALA--ELV-P-WNGDVEALADWALAEGIDLTLVGPEAPLVEG 76 (417)
T ss_dssp CEEEEEESSHHHHHHHHHHHTCSSCCEEEEEECCTTGGGTS--EEC-C-CCSCHHHHHHHHHHHTCCEEEECSSHHHHTT
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEECCCcchhhhc--ccC-C-CccCHHHHHHHHHHcCCCEEEECCchHHHHH
Confidence 58999999999999999998888999999988877654432 234 5 8889999999999999999999999987667
Q ss_pred HHHHHHHCCCCeeCCcHHHHHHhcCHHHHHHHHHHcCCCCCCeeecCCHHHHHHHHHHhCCCEEEEeCCCCCCCcEEEeC
Q 010065 163 LANKLVKAGIPTFGPSSEAAALEGSKNFMKNLCDKYGIPTAKYKTFTDPNAAKQYIQEEGAPIVVKADGLAAGKGVIVAM 242 (519)
Q Consensus 163 ~a~~le~~gip~~g~~~~~~~~~~dK~~~k~~l~~~Gi~~p~~~~v~~~~~~~~~~~~~g~P~VvKP~~g~gs~GV~~v~ 242 (519)
+++.++.+|+|++|++++++.+++||..++++|+++|||+|++..+++.+++.+++++++||+|+||..+++|+||.+++
T Consensus 77 ~~~~l~~~gi~~~g~~~~~~~~~~dK~~~~~~l~~~gip~p~~~~~~~~~~~~~~~~~~~~P~vvKp~~~~gg~Gv~~v~ 156 (417)
T 2ip4_A 77 IADAFQARGLLLFGPTQKAAMIEGSKAFAKGLMERYGIPTARYRVFREPLEALAYLEEVGVPVVVKDSGLAAGKGVTVAF 156 (417)
T ss_dssp HHHHHHHHTCCEESCCHHHHHHHHCHHHHHHHHHHTCCCBCCEEEESSHHHHHHHHHHHCSSEEEECTTSCSSTTCEEES
T ss_pred HHHHHHHCCCCEECccHHHHHHHcCHHHHHHHHHHcCCCCCCeeeeCCHHHHHHHHHHcCCCEEEEECCCCCCCCEEEeC
Confidence 78889999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHhhccCCCCCCcEEEEeccCCcEEEEEEEEeCCeeEEeccccccccccCCCCCCCCCCceEEecCCCC
Q 010065 243 TLEEAYEAVDSMLLKNAFGSAGCRVIIEEFLEGEEASFFALVDGENAIPLESAQDHKRVGDGDTGPNTGGMGAYSPAPVL 322 (519)
Q Consensus 243 ~~~el~~a~~~~~~~~~~~~~~~~~lvEe~I~G~E~sv~~l~dg~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~P~~~l 322 (519)
+.+|+.++++.++.. ..+..++|||||+|+|+++.+++||+.+.++...+.+++.++++.++++++++++.|++ +
T Consensus 157 ~~~el~~~~~~~~~~----~~~~~~lvEe~i~g~E~sv~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~p~~-l 231 (417)
T 2ip4_A 157 DLHQAKQAVANILNR----AEGGEVVVEEYLEGEEATVLALTDGETILPLLPSQDHKRLLDGDQGPMTGGMGAVAPYP-M 231 (417)
T ss_dssp CHHHHHHHHHHHTTS----SSCCCEEEEECCCSCEEEEEEEESSSCEEECCCBEECCEEETTTEEEECSCSEEEESCC-C
T ss_pred CHHHHHHHHHHHHhh----ccCCeEEEEECccCcEEEEEEEEeCCEEEEcchheechhhccCCCCCcCCCCeeeeCCC-C
Confidence 999999999887521 12378999999999999999999887556555555566677777788999999999999 9
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHcCCCeeeEEEEEEEEEcCCCceEEEEEeCCCCCCchHHHHHHhCCCHHHHHHHHHhCC
Q 010065 323 TKELQSVVMESIILPTVKGMSAEGCKFVGVLYAGLMIEKKSGLPKLIEYNVRFGDPECQVLMVRLESDLAEVLLAACRGE 402 (519)
Q Consensus 323 ~~~~~~~i~~~a~~~~~~~~~a~g~~~~G~~~vdf~~~~~g~~~~viEiN~R~G~~~~~~~~~~~G~d~~~~~i~~~~g~ 402 (519)
+++..+++.+.+.+.+.+++.++|++|+|++++||+++++| +||+|+|||+|++.++.+.+.+|+|+.+++++++.|.
T Consensus 232 ~~~~~~~~~~~~~~~~~~~l~~~g~~~~G~~~ve~~~~~~g--~~viEiN~R~g~~~~~~i~~~~g~d~~~~~~~~~~g~ 309 (417)
T 2ip4_A 232 DEATLRRVEEEILGPLVRGLRAEGVVYRGVVYAGLMLTREG--PKVLEFNARFGDPEAQALLPLLENDLVELALRVAEGR 309 (417)
T ss_dssp CHHHHHHHHHHTHHHHHHHHHHTTCCCCEEEEEEEEECSSC--EEEEEEESSCCTTHHHHHTTTBCSCHHHHHHHHHHTC
T ss_pred CHHHHHHHHHHHHHHHHHHHHHcCCCceEEEEEEEEEeCCC--eEEEEEecCCCCcHHHHHHHHhCCCHHHHHHHHHcCC
Confidence 99988888555545566777788888889999999999987 9999999999988776676778999999999999998
Q ss_pred CCCCCcccCCCcEEEEEEecCCCCCCCCCCcccccchhhhccCCCeEEEEeeeeecCCCcEEecCCeEEEEEEecCCHHH
Q 010065 403 LTGVTLNWSPGSAMVVVMASKGYPGSYEKGSEIQNLEEAEQVAPSVKIFHAGTALDADGNFIATGGRVLGVTAKGKDVEE 482 (519)
Q Consensus 403 ~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~rvg~vi~~g~t~~e 482 (519)
+++.++.+.+++++.++++..+||..+..+..+.+++++ +++.+++.|... ..+.+.++++|+++|++.|+|.++
T Consensus 310 l~~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~i~~~~~~----~~v~~~~~g~~~-~~~~~~~~~~rv~~v~~~g~~~~~ 384 (417)
T 2ip4_A 310 LAGTRLSWKEGAAACVVLAAPGYPESPRKGIPLHVPEPP----EGVLVFHAGTRR-EGGRLVSAGGRVLNVVGLGRDLKE 384 (417)
T ss_dssp GGGCCCCBCSSEEEEEEEECTTTTTSCCCCCBCBCCCCC----TTEEEEESSEEE-SSSSEEECSSEEEEEEEEESSHHH
T ss_pred CCcCCccccCCcEEEEEEeCCCCCCCCCCCCcccccCCC----CCeEEEECceEe-eCCeEEecCCcEEEEEEEcCCHHH
Confidence 765555555567888888888888766666667776542 567788877765 346678899999999999999999
Q ss_pred HHHHHHHHhhccccCCeeeccccccccc
Q 010065 483 AQDRAYLAVEEINWPGGFYRRDIGWRAL 510 (519)
Q Consensus 483 a~~~a~~~~~~i~~~g~~~r~dig~~~~ 510 (519)
|+++++++++.|+++|.|||+|||.+.+
T Consensus 385 a~~~~~~~~~~i~~~~~~~r~dig~~~~ 412 (417)
T 2ip4_A 385 ALERAYAYIPQVGFPGAVYRRDIGRRAL 412 (417)
T ss_dssp HHHHHHHHGGGSBCTTCBCCSCTTHHHH
T ss_pred HHHHHHHHHhcCccCCcEEccchhhHHH
Confidence 9999999999999999999999998876
No 5
>2yw2_A Phosphoribosylamine--glycine ligase; glycinamide ribonucleotide synthetase, GAR synthetase, ATP B purine nucleotide biosynthetic pathway; HET: ATP; 1.80A {Aquifex aeolicus} PDB: 2yya_A
Probab=100.00 E-value=3.4e-58 Score=481.42 Aligned_cols=421 Identities=46% Similarity=0.785 Sum_probs=358.1
Q ss_pred cEEEEEeCChhHHHHHHHHHhcCCCcEEEEecCCCCCcCCCCCccccCCCCCCHHHHHHHHHHcCCcEEEECCChhhHHH
Q 010065 83 VVVLVIGGGGREHALCYALKRSHSCDAVFCAPGNAGISNSGDATCIPDLDVLDGDAVISFCRKWSVGLVVVGPEAPLVSG 162 (519)
Q Consensus 83 ~~vliiG~g~~~~~l~~~l~~~~g~~~v~~~~~~~~~~~~~~~~~v~~~d~~d~~~l~~~~~~~~id~Vi~g~E~~~~~~ 162 (519)
|+|||+|+|++++.++++++++.|++++++++.|++....+ +.+ ..|+.|.+.++++++++++|+|+++.|+.+++.
T Consensus 1 m~ililG~g~r~~~~a~~~~~~~g~~~v~~~~~~~~~~~~~--~~~-~~~~~d~~~l~~~~~~~~~d~v~~~~E~~~~~~ 77 (424)
T 2yw2_A 1 MKVLVVGNGGREHAIAWKVAQSPLVKELYVAKGNAGIWEIA--KRV-DISPTDVEKLAEFAKNEGVDFTIVGPEAPLVEG 77 (424)
T ss_dssp CEEEEEESSHHHHHHHHHHTTCTTCSEEEEEECCTTGGGTS--EEE-CSCTTCHHHHHHHHHHHTCSEEEECSHHHHHTT
T ss_pred CEEEEECCCHHHHHHHHHHhhCCCCCEEEEECCCcchhhhc--ccc-cCCcCCHHHHHHHHHHcCCCEEEECCchHHHHH
Confidence 58999999999999999998888999998888777654433 234 578889999999999999999999999876667
Q ss_pred HHHHHHHCCCCeeCCcHHHHHHhcCHHHHHHHHHHcCCCCCCeeecCCHHHHHHHHHHhCCCEEEEeCCCCCCCcEEEeC
Q 010065 163 LANKLVKAGIPTFGPSSEAAALEGSKNFMKNLCDKYGIPTAKYKTFTDPNAAKQYIQEEGAPIVVKADGLAAGKGVIVAM 242 (519)
Q Consensus 163 ~a~~le~~gip~~g~~~~~~~~~~dK~~~k~~l~~~Gi~~p~~~~v~~~~~~~~~~~~~g~P~VvKP~~g~gs~GV~~v~ 242 (519)
+++.++.+|+|++|++++++.+++||..++++|+++|||+|++..+++.+++.+++++++||+|+||..+++|+||++++
T Consensus 78 ~~~~l~~~gi~~~g~~~~~~~~~~dK~~~k~~l~~~gip~p~~~~~~~~~~~~~~~~~~~~PvvvKp~~g~gg~Gv~~v~ 157 (424)
T 2yw2_A 78 IVDEFEKRGLKIFGPNKEAAKLEGSKAFAKTFMKKYGIPTARYEVFTDFEKAKEYVEKVGAPIVVKADGLAAGKGAVVCE 157 (424)
T ss_dssp HHHHHHHTTCCEESCCTTTTHHHHCHHHHHHHHHHTTCCBCCEEEESCHHHHHHHHHHHCSSEEEEESSCCTTCSEEEES
T ss_pred HHHHHHHCCCcEECcCHHHHHHHhCHHHHHHHHHHcCCCCCCeEEECCHHHHHHHHHHcCCcEEEEeCCCCCCCCEEEEC
Confidence 78889999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHhhccCCCCCCcEEEEeccCCcEEEEEEEEeCCeeEEeccccccccccCCCCCCCCCCceEEecCCCC
Q 010065 243 TLEEAYEAVDSMLLKNAFGSAGCRVIIEEFLEGEEASFFALVDGENAIPLESAQDHKRVGDGDTGPNTGGMGAYSPAPVL 322 (519)
Q Consensus 243 ~~~el~~a~~~~~~~~~~~~~~~~~lvEe~I~G~E~sv~~l~dg~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~P~~~l 322 (519)
+.+|+.++++.++....|+..+..++|||||+|+|+++.+++||+.++++...+.+++.++++.++++++++++.|++.+
T Consensus 158 ~~~el~~~~~~~~~~~~~g~~~~~~lvEe~i~g~E~sv~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~p~~~l 237 (424)
T 2yw2_A 158 TVEKAIETLDRFLNKKIFGKSSERVVIEEFLEGEEASYIVMINGDRYVPLPTSQDHKRLLDEDKGPNTGGMGAYSPTPVI 237 (424)
T ss_dssp SHHHHHHHHHHHHTSCTTGGGGSSEEEEECCCSEEEEEEEEEETTEEEECCCBEECCEEETTTEEEECSCSEEEESCTTS
T ss_pred CHHHHHHHHHHHHhhhhccCCCCeEEEEECCCCcEEEEEEEEcCCEEEeecceeeccccccCCCCCCCCCCeeECCCccC
Confidence 99999999998875322322246899999999999999999988766666656666677787788899999999999768
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHcCCCeeeEEEEEEEEEcCCCceEEEEEeCCCCCCchHHHHHHhCCCHHHHHHHHHhCC
Q 010065 323 TKELQSVVMESIILPTVKGMSAEGCKFVGVLYAGLMIEKKSGLPKLIEYNVRFGDPECQVLMVRLESDLAEVLLAACRGE 402 (519)
Q Consensus 323 ~~~~~~~i~~~a~~~~~~~~~a~g~~~~G~~~vdf~~~~~g~~~~viEiN~R~G~~~~~~~~~~~G~d~~~~~i~~~~g~ 402 (519)
++++.+++.+.+.+.+.+++.++|++|+|++++||+++++| +||+|+|||+|++.++.+.+.+|+|+.+++++++.|.
T Consensus 238 ~~~~~~~~~~~~~~~~~~~l~~~g~~~~G~~~ve~~~~~~g--~~viEiN~R~g~~~~~~i~~~~g~d~~~~~~~~~~g~ 315 (424)
T 2yw2_A 238 NEEVEKRIREEIVERVIKGLKEEGIYYRGFLYAGLMITKEG--PKVLEFNVRLGDPEAQPILMRVKNDFLETLLNFYEGK 315 (424)
T ss_dssp CHHHHHHHHHHTHHHHHHHHHHHTCCCEEEEEEEEEEETTE--EEEEEEESSCCTTTHHHHHHTBCSCHHHHHHHHHTTC
T ss_pred CHHHHHHHHHHHHHHHHHHHHHcCCCceeEEEEEEEEeCCC--cEEEEEecCCCCcHHHHHHHHhCCCHHHHHHHHHcCC
Confidence 99888888654444556777777888889999999999987 9999999999988876777778999999999999998
Q ss_pred CCCCCcccCCCcEEEEEEecCCCCCCCCCCcccccchhhhccCCCeEEEEeeeeecCCCcEEecCCeEEEEEEecCCHHH
Q 010065 403 LTGVTLNWSPGSAMVVVMASKGYPGSYEKGSEIQNLEEAEQVAPSVKIFHAGTALDADGNFIATGGRVLGVTAKGKDVEE 482 (519)
Q Consensus 403 ~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~rvg~vi~~g~t~~e 482 (519)
++++ .+.+++++.+++...+||..+..+..+.+++++.. .+++.+++.+... ..+...++++|+++|++.|+|.++
T Consensus 316 l~~~--~~~~~~a~~~~~~~~g~~~~~~~g~~i~~~~~~~~-~~~~~~~~~g~~~-~~~~~~~~~~r~~~v~~~g~~~~~ 391 (424)
T 2yw2_A 316 DVHI--KEDERYALDVVLASRGYPEKPETGKIIHGLDYLKS-MEDVVVFHAGTKK-EGNFTVTSGGRVLNVCAYGKTLKE 391 (424)
T ss_dssp CCCC--CBCSSEEEEEEEECTTTTSSCCCCCBCBCHHHHHT-STTEEEEESSEEE-ETTEEEECSSEEEEEEEEESSHHH
T ss_pred CCcc--cccCCcEEEEEEecCCCCCCCCCCCcCcCcccccC-CCCeEEEEcceEe-eCCEEEecCCcEEEEEEEeCCHHH
Confidence 7643 45556778888888888876656666777776532 3567777777654 346678899999999999999999
Q ss_pred HHHHHHHHhhccccCCeeeccccccccccc
Q 010065 483 AQDRAYLAVEEINWPGGFYRRDIGWRALPQ 512 (519)
Q Consensus 483 a~~~a~~~~~~i~~~g~~~r~dig~~~~~~ 512 (519)
|+++++++++.++++|.|||+|||.+.+..
T Consensus 392 a~~~~~~~~~~i~~~g~~~r~di~~~~~~~ 421 (424)
T 2yw2_A 392 AKERAYEAIRYVCFEGMHYRKDIGDKAFKY 421 (424)
T ss_dssp HHHHHHHHHTTCBCTTCBCCSCTTTTTGGG
T ss_pred HHHHHHHHHhcceeCCcEEcchhhhHhhhh
Confidence 999999999999999999999999887643
No 6
>2xcl_A Phosphoribosylamine--glycine ligase; GAR-SYN, ATP-grAsp, metal binding; HET: ANP; 2.10A {Bacillus subtilis} PDB: 2xd4_A*
Probab=100.00 E-value=8.9e-59 Score=485.51 Aligned_cols=418 Identities=51% Similarity=0.843 Sum_probs=356.9
Q ss_pred cEEEEEeCChhHHHHHHHHHhcCCCcEEEEecCCCCCcCCCCCccccCCCCCCHHHHHHHHHHcCCcEEEECCChhhHHH
Q 010065 83 VVVLVIGGGGREHALCYALKRSHSCDAVFCAPGNAGISNSGDATCIPDLDVLDGDAVISFCRKWSVGLVVVGPEAPLVSG 162 (519)
Q Consensus 83 ~~vliiG~g~~~~~l~~~l~~~~g~~~v~~~~~~~~~~~~~~~~~v~~~d~~d~~~l~~~~~~~~id~Vi~g~E~~~~~~ 162 (519)
|+|||+|+|+++++++++++++.|++++++++.|++....+ +.+ ..|+.|.+.++++++++++|+|+++.|+.+++.
T Consensus 1 m~ililG~g~r~~~~a~~~~~~~g~~~v~~~~~~~~~~~~~--~~~-~~~~~d~~~l~~~~~~~~~d~v~~~~E~~~~~~ 77 (422)
T 2xcl_A 1 MNVLIIGKGGREHTLAWKAAQSSLVENVFAAPGNDGMAASA--QLV-NIEESDHAGLVSFAKQNQVGLTIVGPEVPLIEG 77 (422)
T ss_dssp CEEEEEECSHHHHHHHHHHTTCTTCSEEEEEECCGGGTTTC--EEC-CCCTTCHHHHHHHHHHTTEEEEEECSHHHHHTT
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEeCCChhhhhhc--ccc-ccCcCCHHHHHHHHHHcCCCEEEECCcHHHHHH
Confidence 58999999999999999998888999999988776654332 234 578889999999999999999999999887667
Q ss_pred HHHHHHHCCCCeeCCcHHHHHHhcCHHHHHHHHHHcCCCCCCeeecCCHHHHHHHHHHhCCCEEEEeCCCCCCCcEEEeC
Q 010065 163 LANKLVKAGIPTFGPSSEAAALEGSKNFMKNLCDKYGIPTAKYKTFTDPNAAKQYIQEEGAPIVVKADGLAAGKGVIVAM 242 (519)
Q Consensus 163 ~a~~le~~gip~~g~~~~~~~~~~dK~~~k~~l~~~Gi~~p~~~~v~~~~~~~~~~~~~g~P~VvKP~~g~gs~GV~~v~ 242 (519)
+++.++.+|+|++|++++++.+++||..++++|+++|||+|++..+++.+++.+++++++||+|+||..+++|+||.+++
T Consensus 78 ~~~~l~~~gi~~~g~~~~~~~~~~dK~~~k~~l~~~gip~p~~~~~~~~~~~~~~~~~~~~P~vvKp~~~~~g~Gv~~v~ 157 (422)
T 2xcl_A 78 LVDEFEKAGLHVFGPSKAAAIIEGSKQFAKDLMKKYDIPTAEYETFTSFDEAKAYVQEKGAPIVIKADGLAAGKGVTVAM 157 (422)
T ss_dssp HHHHHHHTTCCEESCCTTTTHHHHCHHHHHHHHHHTTCCBCCEEEESCHHHHHHHHHHHCSSEEEEESSCGGGTCEEEES
T ss_pred HHHHHHHCCCCEECcCHHHHHHhcCHHHHHHHHHHcCCCCCCeEEECCHHHHHHHHHhcCCCEEEEeCCCCCCCcEEEEC
Confidence 88889999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHhhccCCCCCCcEEEEeccCCcEEEEEEEEeCCeeEEeccccccccccCCCCCCCCCCceEEecCCCC
Q 010065 243 TLEEAYEAVDSMLLKNAFGSAGCRVIIEEFLEGEEASFFALVDGENAIPLESAQDHKRVGDGDTGPNTGGMGAYSPAPVL 322 (519)
Q Consensus 243 ~~~el~~a~~~~~~~~~~~~~~~~~lvEe~I~G~E~sv~~l~dg~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~P~~~l 322 (519)
+.+|+.++++.++....++.....++|||||+|+|+++.+++||+.++++...+.+++.++++.++++++++++.|++.+
T Consensus 158 ~~~el~~~~~~~~~~~~~g~~~~~~lvEe~i~g~E~sv~~~~dG~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~p~~~l 237 (422)
T 2xcl_A 158 TEEEAIACLHDFLEDEKFGDASASVVIEEYLSGEEFSLMAFVKGEKVYPMVIAQDHKRAFDGDKGPNTGGMGAYSPVPQI 237 (422)
T ss_dssp SHHHHHHHHHHHHTSCTTGGGGSSEEEEECCCSEEEEEEEEEETTEEEECCCBEEEEEEEGGGEEEEEEEEEEEESCTTS
T ss_pred CHHHHHHHHHHHHhhhhccCCCCeEEEEECCcCcEEEEEEEEcCCEEEecceeeeeehhcCCCCCCCCCCCeeEccCCCC
Confidence 99999999998865322222246899999999999999999988866655555555667777778888899999998768
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHcCCCeeeEEEEEEEEEcCCCceEEEEEeCCCCCCchHHHHHHhCCCHHHHHHHHHhCC
Q 010065 323 TKELQSVVMESIILPTVKGMSAEGCKFVGVLYAGLMIEKKSGLPKLIEYNVRFGDPECQVLMVRLESDLAEVLLAACRGE 402 (519)
Q Consensus 323 ~~~~~~~i~~~a~~~~~~~~~a~g~~~~G~~~vdf~~~~~g~~~~viEiN~R~G~~~~~~~~~~~G~d~~~~~i~~~~g~ 402 (519)
+++..+++.+.+.+.+.+++.++|++|.|++++||+++++| +||+|+|||||++.++.+.+.+|.|+.+++++++.|.
T Consensus 238 ~~~~~~~~~~~~~~~~~~~l~~~g~~~~G~~~vd~~~~~~g--~~viEiN~R~g~~~~~~i~~~~g~d~~~~~~~~~~g~ 315 (422)
T 2xcl_A 238 SEETVRHAVETIVKPAAKAMVQEGRSFTGVLYAGLMLTENG--SKVIEFNARFGDPETQVVLPRMESDLVQVLLDLLDDK 315 (422)
T ss_dssp CHHHHHHHHHHTHHHHHHHHHHTTCCCEEEEEEEEEEETTE--EEEEEEESSCCTTTHHHHGGGBCSCHHHHHHHHHTTC
T ss_pred CHHHHHHHHHHHHHHHHHHHHHcCCCcEEEEEeeEEEeCCC--cEEEEEecCCCCcHHHHHHHhcCCCHHHHHHHHHcCC
Confidence 99888888665555566777778888889999999999987 9999999999998876676778999999999999998
Q ss_pred CCCCCcccCCCcEEEEEEecCCCCCCCCCCcccccchhhhccCCCeEEEEeeeeecCCCcEEecCCeEEEEEEecCCHHH
Q 010065 403 LTGVTLNWSPGSAMVVVMASKGYPGSYEKGSEIQNLEEAEQVAPSVKIFHAGTALDADGNFIATGGRVLGVTAKGKDVEE 482 (519)
Q Consensus 403 ~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~rvg~vi~~g~t~~e 482 (519)
+++. .+.++.++.+++...+||..+.++..+.+++++ . +++.+++.+... ..|.+.++++|+++|++.|+|.++
T Consensus 316 l~~~--~~~~~~~~~~~~~~~g~~~~~~~g~~i~~~~~~-~--~~~~~~~~g~~~-~~~~~~~~~~r~~~v~~~g~~~~~ 389 (422)
T 2xcl_A 316 EVDL--RWKDTAAVSVVLASEGYPESYAKGTPIGSLAAE-T--EQVVVFHAGTKA-EGGEFVTNGGRVANVTAFDETFEA 389 (422)
T ss_dssp CCCC--CBCSCEEEEEEEEETTTTSCCCSCCBCCCCCCC-S--SSEEEEESSEEE-CSSSEEECSSEEEEEEEEESSHHH
T ss_pred cCcc--cccCCceEEEEEECCCCCCCCCCCCcccCcccC-C--CCcEEEEeeeEe-eCCEEEeCCCceEEEEEEeCCHHH
Confidence 7643 455556777888888898766666677777664 2 577788877765 467788899999999999999999
Q ss_pred HHHHHHHHhhccccCCeeecccccccccc
Q 010065 483 AQDRAYLAVEEINWPGGFYRRDIGWRALP 511 (519)
Q Consensus 483 a~~~a~~~~~~i~~~g~~~r~dig~~~~~ 511 (519)
|+++++++++.|+++|.|||+|||.+.+.
T Consensus 390 a~~~~~~~~~~i~~~g~~~r~di~~~~~~ 418 (422)
T 2xcl_A 390 ARDRVYKAVDEIFKPGLFFRKDIGARALK 418 (422)
T ss_dssp HHHHHHHHHHHHCCTTEECCSCTTHHHHH
T ss_pred HHHHHHHHHhcceeCCcEecchhhHHHHh
Confidence 99999999999999999999999988764
No 7
>2qk4_A Trifunctional purine biosynthetic protein adenosi; purine synthesis, enzyme, protein-ATP complex, structural GE structural genomics consortium, SGC; HET: ATP; 2.45A {Homo sapiens}
Probab=100.00 E-value=2.9e-58 Score=485.65 Aligned_cols=423 Identities=48% Similarity=0.827 Sum_probs=351.7
Q ss_pred ccEEEEEeCChhHHHHHHHHHhcCCCcEEEEecCCCCCcCCCCCccccCCCCCCHHHHHHHHHHcCCcEEEECCChhhHH
Q 010065 82 RVVVLVIGGGGREHALCYALKRSHSCDAVFCAPGNAGISNSGDATCIPDLDVLDGDAVISFCRKWSVGLVVVGPEAPLVS 161 (519)
Q Consensus 82 ~~~vliiG~g~~~~~l~~~l~~~~g~~~v~~~~~~~~~~~~~~~~~v~~~d~~d~~~l~~~~~~~~id~Vi~g~E~~~~~ 161 (519)
+++|||+|+|+++++++|+++++.|++++++++++++....+....+ ..|+.|.+.++++++++++|+|+++.|+.+..
T Consensus 24 ~~~IlIlG~g~r~~al~~~~a~~~g~~~v~~~~~~~~~~~~~~~~~~-~~~~~d~~~l~~~~~~~~~d~V~~~~E~~~~~ 102 (452)
T 2qk4_A 24 AARVLIIGSGGREHTLAWKLAQSHHVKQVLVAPGNAGTACSEKISNT-AISISDHTALAQFCKEKKIEFVVVGPEAPLAA 102 (452)
T ss_dssp SEEEEEEECSHHHHHHHHHHTTCTTEEEEEEEECCGGGSBSSSEEEC-CCCSSCHHHHHHHHHHHTCCEEEECSSHHHHT
T ss_pred CcEEEEECCCHHHHHHHHHHHhcCCCCEEEEECCChhhhhhcccccc-ccCCCCHHHHHHHHHHcCCCEEEECCcHHHHH
Confidence 47999999999888899999888899988888877655433322234 57888999999999999999999999998666
Q ss_pred HHHHHHHHCCCCeeCCcHHHHHHhcCHHHHHHHHHHcCCCCCCeeecCCHHHHHHHHHHhCCC-EEEEeCCCCCCCcEEE
Q 010065 162 GLANKLVKAGIPTFGPSSEAAALEGSKNFMKNLCDKYGIPTAKYKTFTDPNAAKQYIQEEGAP-IVVKADGLAAGKGVIV 240 (519)
Q Consensus 162 ~~a~~le~~gip~~g~~~~~~~~~~dK~~~k~~l~~~Gi~~p~~~~v~~~~~~~~~~~~~g~P-~VvKP~~g~gs~GV~~ 240 (519)
.+++.++.+|+|++|++++++.+++||..++++|+++|||+|++..+++.+++.+++++++|| +|+||..+++|+||++
T Consensus 103 ~~~~~l~~~gi~~~g~~~~~~~~~~dK~~~k~~l~~~gip~p~~~~~~~~~~~~~~~~~~g~P~vvvKp~~~~gg~Gv~~ 182 (452)
T 2qk4_A 103 GIVGNLRSAGVQCFGPTAEAAQLESSKRFAKEFMDRHGIPTAQWKAFTKPEEACSFILSADFPALVVKASGLAAGKGVIV 182 (452)
T ss_dssp THHHHHHHTTCCEESCCTTTTHHHHBHHHHHHHHHHTTCCBCCEEEESSHHHHHHHHHHCSSCEEEEEESBC---CCEEE
T ss_pred HHHHHHHhcCCcEeCcCHHHHHHhcCHHHHHHHHHHCCCCCCCeEEECCHHHHHHHHHhCCCCeEEEEeCCCCCCCCEEE
Confidence 778889999999999999999999999999999999999999999999999999999999999 9999999999999999
Q ss_pred eCCHHHHHHHHHHHHhhccCCCCCCcEEEEeccCCcEEEEEEEEeCCeeEEeccccccccccCCCCCCCCCCceEEecCC
Q 010065 241 AMTLEEAYEAVDSMLLKNAFGSAGCRVIIEEFLEGEEASFFALVDGENAIPLESAQDHKRVGDGDTGPNTGGMGAYSPAP 320 (519)
Q Consensus 241 v~~~~el~~a~~~~~~~~~~~~~~~~~lvEe~I~G~E~sv~~l~dg~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~P~~ 320 (519)
+++.+|+.++++.++....|+..+..++|||||+|+|+++.+++||+.+.++...+.+++.++++.++++++++++.|++
T Consensus 183 v~~~~el~~~~~~~~~~~~~g~~~~~~lvEe~i~G~E~sv~~~~dG~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~P~~ 262 (452)
T 2qk4_A 183 AKSKEEACKAVQEIMQEKAFGAAGETIVIEELLDGEEVSCLCFTDGKTVAPMPPAQDHKRLLEGDGGPNTGGMGAYCPAP 262 (452)
T ss_dssp CSSHHHHHHHHHHHTTC-------CCEEEEECCCSEEEEEEEEECSSCEEECCCBEEEEEEETTTEEEEEEEEEEEESCT
T ss_pred eCCHHHHHHHHHHHHhhhhccCCCCeEEEEECCCCCeEEEEEEECCCEEEEcceeeecccccCCCCCCCCCCceeeccCc
Confidence 99999999999887643223222478999999999999999999877566666666566777777788889999999997
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHHHcCCCeeeEEEEEEEEEcCCCceEEEEEeCCCCCCchHHHHHHhCCCHHHHHHHHHh
Q 010065 321 VLTKELQSVVMESIILPTVKGMSAEGCKFVGVLYAGLMIEKKSGLPKLIEYNVRFGDPECQVLMVRLESDLAEVLLAACR 400 (519)
Q Consensus 321 ~l~~~~~~~i~~~a~~~~~~~~~a~g~~~~G~~~vdf~~~~~g~~~~viEiN~R~G~~~~~~~~~~~G~d~~~~~i~~~~ 400 (519)
.+++++.+++.+.+.+.+.+++.++|++|+|++++||+++++| +||+|+|||+|++.++.+.+.+|+|+.+++++++.
T Consensus 263 ~l~~~~~~~~~~~~a~~~~~~l~~~g~~~~G~~~ve~~~~~~g--~~viEiN~R~~~~~~~~i~~~~g~d~~~~~~~~~~ 340 (452)
T 2qk4_A 263 QVSNDLLLKIKDTVLQRTVDGMQQEGTPYTGILYAGIMLTKNG--PKVLEFNCRFGDPECQVILPLLKSDLYEVIQSTLD 340 (452)
T ss_dssp TCCHHHHHHHHHHTHHHHHHHHHHTTCCCCEEEEEEEEEETTE--EEEEEEESSCCTTTHHHHGGGBCSCHHHHHHHHHT
T ss_pred cCCHHHHHHHHHHHHHHHHHHHHHcCCCceeEEEEEEEEeCCC--cEEEEEeccCCCcHHHHHHHHhCCCHHHHHHHHHc
Confidence 6899888888644444456777778888889999999999987 99999999999888766777789999999999999
Q ss_pred CCCCCCCcccCCCc-EEEEEEecCCCCCCCCCCcccccchhhhccCCCeEEEEeeeeecCCCcEEecCCeEEEEEEecCC
Q 010065 401 GELTGVTLNWSPGS-AMVVVMASKGYPGSYEKGSEIQNLEEAEQVAPSVKIFHAGTALDADGNFIATGGRVLGVTAKGKD 479 (519)
Q Consensus 401 g~~~~~~~~~~~~~-a~~~~l~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~rvg~vi~~g~t 479 (519)
|.+++..+.+.++. ++.+++...+||..+..+..+.+++++ . .+++.+++.|... ..+.+.++++|+++|++.|+|
T Consensus 341 g~l~~~~~~~~~~~~a~~~~l~~~g~~~~~~~g~~i~~l~~~-~-~~~v~~~~~G~~~-~~~~~~~~~~rv~~v~~~g~~ 417 (452)
T 2qk4_A 341 GLLCTSLPVWLENHTALTVVMASKGYPGDYTKGVEITGFPEA-Q-ALGLEVFHAGTAL-KNGKVVTHGGRVLAVTAIREN 417 (452)
T ss_dssp TCGGGGCCCBCTTCEEEEEEEECTTTTSSCCCSCBCBCHHHH-H-HTTCEEEESSEEE-ETTEEEECSSEEEEEEEEESS
T ss_pred CCCCcccceecCCCcEEEEEEECCCCCCCCCCCCcccCcccc-C-CCCcEEEECcEEe-eCCeEEecCCeEEEEEEecCC
Confidence 98766555655556 778888888888766556567777654 1 2467778777765 356778899999999999999
Q ss_pred HHHHHHHHHHHhhccccCCeeeccccccccc
Q 010065 480 VEEAQDRAYLAVEEINWPGGFYRRDIGWRAL 510 (519)
Q Consensus 480 ~~ea~~~a~~~~~~i~~~g~~~r~dig~~~~ 510 (519)
.++|+++++++++.|+++|.|||+|||.+.+
T Consensus 418 ~~~a~~~~~~~~~~i~~~g~~~r~di~~~~~ 448 (452)
T 2qk4_A 418 LISALEEAKKGLAAIKFEGAIYRKDIGFRAI 448 (452)
T ss_dssp HHHHHHHHHHHHHHCBCTTCBCCSCTTHHHH
T ss_pred HHHHHHHHHHHHhhcccCCcEEchhcchhhh
Confidence 9999999999999999999999999998765
No 8
>1vkz_A Phosphoribosylamine--glycine ligase; TM1250, structural GENO JCSG, protein structure initiative, PSI, joint center for S genomics; 2.30A {Thermotoga maritima} SCOP: b.84.2.1 c.30.1.1 d.142.1.2
Probab=100.00 E-value=2.6e-55 Score=457.42 Aligned_cols=398 Identities=38% Similarity=0.611 Sum_probs=324.4
Q ss_pred CccEEEEEeCChhHHHHHHHHHhcCCCcEEEEecCCCCCcCCCCCccccCCCCCCHHHHHHHHHHcCCcEEEECCChhhH
Q 010065 81 QRVVVLVIGGGGREHALCYALKRSHSCDAVFCAPGNAGISNSGDATCIPDLDVLDGDAVISFCRKWSVGLVVVGPEAPLV 160 (519)
Q Consensus 81 ~~~~vliiG~g~~~~~l~~~l~~~~g~~~v~~~~~~~~~~~~~~~~~v~~~d~~d~~~l~~~~~~~~id~Vi~g~E~~~~ 160 (519)
++++|||||+|++++.++|+++++.| +++.+ ++|++....+. . + |.+.++++++++++|+|++++|+..+
T Consensus 14 ~~~~vlviG~Ggr~~a~a~~~a~~~g-~v~~~-~~np~~~~~d~--~---i---d~~~l~~~~~~~~~d~V~~~~E~~~~ 83 (412)
T 1vkz_A 14 KAVRVHILGSGGREHAIGWAFAKQGY-EVHFY-PGNAGTKRDGT--N---H---PYEGEKTLKAIPEEDIVIPGSEEFLV 83 (412)
T ss_dssp --CEEEEEECSHHHHHHHHHHHHTTC-EEEEE-ECCTTGGGTSE--E---C---CCCTHHHHHTSCSSCEECCSSGGGTC
T ss_pred ccCEEEEECCCHHHHHHHHHHHhCCC-CEEEE-CCChhhhcccc--c---C---CHHHHHHHHHHcCCCEEEECCcHHHH
Confidence 36799999999999999999988878 65555 77777654321 1 2 35678999999999999999999875
Q ss_pred HHHHHHHHHCCCCeeCCcHHHHHHhcCHHHHHHHHHHcCCCCCCeeecCCHHHHHHHHHHhCCCEEEEeCCCCCCCcEEE
Q 010065 161 SGLANKLVKAGIPTFGPSSEAAALEGSKNFMKNLCDKYGIPTAKYKTFTDPNAAKQYIQEEGAPIVVKADGLAAGKGVIV 240 (519)
Q Consensus 161 ~~~a~~le~~gip~~g~~~~~~~~~~dK~~~k~~l~~~Gi~~p~~~~v~~~~~~~~~~~~~g~P~VvKP~~g~gs~GV~~ 240 (519)
+.+ ++.++. ++|++++++.+++||..+|++|+++|||+|++..+++.+++.+++++++||+||||..+++|+||++
T Consensus 84 a~~---~~~l~~-~~g~~~~~~~~~~dK~~~k~~l~~~gip~p~~~~~~~~~e~~~~~~~~g~PvvvKp~~~~gg~Gv~~ 159 (412)
T 1vkz_A 84 EGV---SNWRSN-VFGPVKEVARLEGSKVYAKRFMKKYGIRTARFEVAETPEELREKIKKFSPPYVIKADGLARGKGVLI 159 (412)
T ss_dssp C--------CTT-BSSCCHHHHHHHHCHHHHHHHHHHTTCCCCCEEEESSHHHHHHHHTTSCSSEEEEESSCCSSCCEEE
T ss_pred HHH---HHHhhh-hhCCCHHHHHHhcCHHHHHHHHHHcCCCCCCEEEECCHHHHHHHHHhcCCCEEEEeCCCCCCCCEEE
Confidence 444 677776 6699999999999999999999999999999999999999999888999999999999999999999
Q ss_pred eCCHHHHHHHHHHHHhhc-cCCCCCCcEEEEeccCCcEEEEEEEEeCCeeEEeccccccccccCCCCCCCCCCceEEecC
Q 010065 241 AMTLEEAYEAVDSMLLKN-AFGSAGCRVIIEEFLEGEEASFFALVDGENAIPLESAQDHKRVGDGDTGPNTGGMGAYSPA 319 (519)
Q Consensus 241 v~~~~el~~a~~~~~~~~-~~~~~~~~~lvEe~I~G~E~sv~~l~dg~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~P~ 319 (519)
+++.+|+.++++.++... .|+. ...++|||||+|+|+++.+++||+.+.++...+.+++.++++.++++++++++.|+
T Consensus 160 v~~~~el~~a~~~~~~~~~~~g~-~~~vlvEe~i~G~E~sv~~~~dg~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~P~ 238 (412)
T 1vkz_A 160 LDSKEETIEKGSKLIIGELIKGV-KGPVVIDEFLAGNELSAMAVVNGRNFVILPFVRDYKRLMDGDRGPNTGGMGSWGPV 238 (412)
T ss_dssp ESSHHHHHHHHHHHHHTSSSTTC-CSCEEEEECCCSEEEEEEEEEETTEEEECCCCEECCEEETTTEEEECSCSEEEECC
T ss_pred ECCHHHHHHHHHHHHhhccccCC-CCeEEEEECCcCcEEEEEEEECCCEEEEeeeeEeeeeccCCCCCCCCCCceEEECC
Confidence 999999999999887432 2322 24899999999999999999988866656544556677787888999999999999
Q ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHcCCCeeeEEEEEEEEEcCCCceEEEEEeCCCCCCchHHHHHHhCCCHHHHHHHHH
Q 010065 320 PVLTKELQSVVMESIILPTVKGMSAEGCKFVGVLYAGLMIEKKSGLPKLIEYNVRFGDPECQVLMVRLESDLAEVLLAAC 399 (519)
Q Consensus 320 ~~l~~~~~~~i~~~a~~~~~~~~~a~g~~~~G~~~vdf~~~~~g~~~~viEiN~R~G~~~~~~~~~~~G~d~~~~~i~~~ 399 (519)
+ +++++.+++++.+.+ +.+++...|++|.|++++||+++++| +||+|+|||+|++.++.+.+.+|+|+.+++++++
T Consensus 239 ~-l~~~~~~~i~~~a~~-~~~~l~~~g~~~~G~~~ve~~~~~~g--~~viEiN~R~g~~~~~~~~~~~g~d~~~~~~~~~ 314 (412)
T 1vkz_A 239 E-IPSDTIKKIEELFDK-TLWGVEKEGYAYRGFLYLGLMLHDGD--PYILEYNVRLGDPETEVIVTLNPEGFVNAVLEGY 314 (412)
T ss_dssp C-CCHHHHHHHHHHHHH-HHHHHHHTTCCCEEEEEEEEEEETTE--EEEEEEESSCCTTHHHHHHHHCHHHHHHHHHHHH
T ss_pred C-CCHHHHHHHHHHHHH-HHHHHHhcCCCcEEEEEEEEEEECCC--cEEEEEecCCCCCcceeehhhcCCCHHHHHHHHh
Confidence 9 999998888776643 44455555777889999999999987 9999999999998887788888999999999999
Q ss_pred hCCCCCCCcccCCCcEEEEEEecCCCCCCCCCCcccccchhhhccCCCeEEEEeeeeecCCCcEEecCCeEEEEEEecCC
Q 010065 400 RGELTGVTLNWSPGSAMVVVMASKGYPGSYEKGSEIQNLEEAEQVAPSVKIFHAGTALDADGNFIATGGRVLGVTAKGKD 479 (519)
Q Consensus 400 ~g~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~rvg~vi~~g~t 479 (519)
.|.+++. .+.+++++.++++..+||..+..+..+. ++. ++ .+++.|... ..+...++++|+|+|++.|+|
T Consensus 315 ~g~l~~~--~~~~~~a~~~~l~~~~~~~~~~~g~~i~-l~~-----~~-~v~~~g~~~-~~~~~~~~~~~vg~v~~~g~~ 384 (412)
T 1vkz_A 315 RGGKMEP--VEPRGFAVDVVLAARGYPDAPEKGKEIT-LPE-----EG-LIFFAGVAE-KDGKLVTNGGRVLHCMGTGET 384 (412)
T ss_dssp HTSCCCC--CCCCSEEEEEEEECTTTTTSCCCCCBCB-CCS-----SC-CEEESSEEE-ETTEEEECSSEEEEEEEEESS
T ss_pred cCCCccc--cccCCeEEEEEEecCCCCCCCCCCCEee-eCC-----CC-cEEECcccc-cCCeEEeCCCcEEEEEEeCCC
Confidence 9987643 4555677888888888876554444443 322 33 566666653 345677889999999999999
Q ss_pred HHHHHHHHHHHhhccccCCeeecccccc
Q 010065 480 VEEAQDRAYLAVEEINWPGGFYRRDIGW 507 (519)
Q Consensus 480 ~~ea~~~a~~~~~~i~~~g~~~r~dig~ 507 (519)
.++|+++++++++.|+++|.|||+|||.
T Consensus 385 ~~ea~~~~~~~~~~i~~~g~~~r~di~~ 412 (412)
T 1vkz_A 385 KEEARRKAYELAEKVHFEGKTYRRDIAL 412 (412)
T ss_dssp HHHHHHHHHHHHHHCBCTTCBCCTTCC-
T ss_pred HHHHHHHHHHHhcceeeCCCEecCCCCC
Confidence 9999999999999999999999999994
No 9
>3tqt_A D-alanine--D-alanine ligase; cell envelope; 1.88A {Coxiella burnetii}
Probab=100.00 E-value=6.6e-47 Score=386.95 Aligned_cols=310 Identities=16% Similarity=0.158 Sum_probs=227.6
Q ss_pred ccceeEEEeeccCCCCCcccccCCCCCCCccEEEEEeCChhHHHHHHHHHhcCCCcEEEEecCCCCCcCCCC-CccccCC
Q 010065 53 KSSFFSTVKCLAQKSQPSVSVNAPTNAGQRVVVLVIGGGGREHALCYALKRSHSCDAVFCAPGNAGISNSGD-ATCIPDL 131 (519)
Q Consensus 53 ~~~~~i~v~~GG~s~e~~vS~~s~~~~~~~~~vliiG~g~~~~~l~~~l~~~~g~~~v~~~~~~~~~~~~~~-~~~v~~~ 131 (519)
..+|||+|||||.|+||+||+.||.+ +..+|.+. +|+++.++.+..+.|.... ...+ ..
T Consensus 2 ~~~~~v~vl~GG~S~E~evSl~Sa~~------------------v~~~l~~~-~~~v~~i~i~~~~~~~~~~~~~~~-~~ 61 (372)
T 3tqt_A 2 AEKLHISVLCGGQSTEHEISIQSAKN------------------IVNTLDAA-KYLISVIFIDHVGRWYLIDQPEMF-LA 61 (372)
T ss_dssp CCSEEEEEEEECSSTTHHHHHHHHHH------------------HHHHSCTT-TEEEEEEEECTTSCEEEECCHHHH-HH
T ss_pred CCCCEEEEEeccCCCccHhHHHHHHH------------------HHHHHhhc-CceEEEEEECCCCCEEeccchhhh-hc
Confidence 45789999999999999999999876 56666554 7777777655444332100 0000 00
Q ss_pred CCCCHHHHH--------------------HHHH-HcCCcEEEE-----CCChhhHHHHHHHHHHCCCCeeCCcHHHHHHh
Q 010065 132 DVLDGDAVI--------------------SFCR-KWSVGLVVV-----GPEAPLVSGLANKLVKAGIPTFGPSSEAAALE 185 (519)
Q Consensus 132 d~~d~~~l~--------------------~~~~-~~~id~Vi~-----g~E~~~~~~~a~~le~~gip~~g~~~~~~~~~ 185 (519)
+......+. .... ..++|+||| .+||+.+|++ |+.+|+||+|+++.+++++
T Consensus 62 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~D~vf~~lhG~~gEdg~iq~l---le~~gipy~G~~~~a~~~~ 138 (372)
T 3tqt_A 62 HSPDHLVKEGSARPITIAFGDAAKPWQSLNGDGRRYSADCVFPMVHGTQGEDGALQGL---LELLNLPYVGANVQSSAVC 138 (372)
T ss_dssp SCHHHHHHHTCSEEEEECTTCSSCCEEEC----CEECCSEEEECCCSTTTTSSHHHHH---HHHTTCCBSSCCHHHHHHH
T ss_pred cccccccccccccceeecccccccceeeccccccccCCCEEEEcCCCCCCcCHHHHHH---HHHcCCCeeCcCHHHHHHH
Confidence 000000000 0001 147999999 2799977666 9999999999999999999
Q ss_pred cCHHHHHHHHHHcCCCCCCeeecCCHHH----HHHHHHHhCCC-EEEEeCCCCCCCcEEEeCCHHHHHHHHHHHHhhccC
Q 010065 186 GSKNFMKNLCDKYGIPTAKYKTFTDPNA----AKQYIQEEGAP-IVVKADGLAAGKGVIVAMTLEEAYEAVDSMLLKNAF 260 (519)
Q Consensus 186 ~dK~~~k~~l~~~Gi~~p~~~~v~~~~~----~~~~~~~~g~P-~VvKP~~g~gs~GV~~v~~~~el~~a~~~~~~~~~~ 260 (519)
+||..+|++++++|||+|++..+.+.++ +.++.++++|| +||||.+++||.||.++++.+|+.++++.++.
T Consensus 139 ~DK~~~k~~l~~~GIp~p~~~~~~~~~~~~~~~~~~~~~lg~P~vvVKP~~ggss~Gv~~v~~~~eL~~a~~~a~~---- 214 (372)
T 3tqt_A 139 MEKDLTKTVLRAGGIPVVDWHTLSPRDATEGVYQRLLDRWGTSELFVKAVSLGSSVATLPVKTETEFTKAVKEVFR---- 214 (372)
T ss_dssp HSHHHHHHHHHHTTCCBCCCEEECTTSCCTTHHHHHHHHC---CEEEEESSCCSGGGEEEECSHHHHHHHHHHHTT----
T ss_pred hCHHHHHHHHHHCCcCCCCEEEEechhhhhhHHHHHHHhcCCCeEEEEECCCCCCCCEEEECCHHHHHHHHHHHHh----
Confidence 9999999999999999999999887653 55677889999 99999999999999999999999999998863
Q ss_pred CCCCCcEEEEeccCCcEEEEEEEEeCCe-eEEeccccccccccCCCCCCCCCC-ceEEecCCCCCHHHHHHHHHHHHHHH
Q 010065 261 GSAGCRVIIEEFLEGEEASFFALVDGEN-AIPLESAQDHKRVGDGDTGPNTGG-MGAYSPAPVLTKELQSVVMESIILPT 338 (519)
Q Consensus 261 ~~~~~~~lvEe~I~G~E~sv~~l~dg~~-~~~~~~~~~~~~~~~~~~~~~~g~-~~~~~P~~~l~~~~~~~i~~~a~~~~ 338 (519)
.+..+|||+||+|+|++|.++.++.. +.+.........+++++.+|..+. +.+.+|++ ++++..+++++.+.
T Consensus 215 --~~~~vlVEe~I~G~E~~v~vl~~~~~~~~~~~ei~~~~~~~d~~~ky~~g~~~~~~~Pa~-l~~~~~~~i~~~a~--- 288 (372)
T 3tqt_A 215 --YDDRLMVEPRIRGREIECAVLGNGAPKASLPGEIIPHHDYYSYDAKYLDPNGATTTTSVD-LSESVTKQIQQIAI--- 288 (372)
T ss_dssp --TCSCEEEEECCCSEEEEEEEEESSSCEECCCEEEECC---------------CEEESCCC-CCHHHHHHHHHHHH---
T ss_pred --cCCCEEEECCCCCEEEEEEEEeCCCceEeeeEEEecCCCccchhhcccCCCceEEEeCCC-CCHHHHHHHHHHHH---
Confidence 56789999999999999999986642 222233333446889999998887 88899999 99999999988774
Q ss_pred HHHHHHcCCCeeeEEEEEEEEEcCCCceEEEEEeCCCCCCchHHHHHH----hCCCHHHHHHHHHh
Q 010065 339 VKGMSAEGCKFVGVLYAGLMIEKKSGLPKLIEYNVRFGDPECQVLMVR----LESDLAEVLLAACR 400 (519)
Q Consensus 339 ~~~~~a~g~~~~G~~~vdf~~~~~g~~~~viEiN~R~G~~~~~~~~~~----~G~d~~~~~i~~~~ 400 (519)
++++++|+. |++|+||+++++| ++||+|||||||+|.+ +++|. +|+|+.+++.+++.
T Consensus 289 -~~~~aLg~~--G~~rvDf~~~~dg-~~~vlEINt~PG~t~~-S~~p~~~~~~G~~~~~li~~li~ 349 (372)
T 3tqt_A 289 -DAFKMVHCS--GMARVDFFVTPNN-KVLVNEINTIPGFTNI-SMYPKMWEASGLPCPNLLDQLIE 349 (372)
T ss_dssp -HHHHHTTCC--EEEEEEEEECTTC-CEEEEEEESSCCCSTT-CHHHHHHHHTTCCHHHHHHHHHH
T ss_pred -HHHHHhCCc--cEEEEEEEEeCCC-cEEEEEEECCCCcCcc-CHHHHHHHHhCCCHHHHHHHHHH
Confidence 688999988 9999999999876 8999999999999876 56554 49999998877654
No 10
>4fu0_A D-alanine--D-alanine ligase 7; vancomycin resistance, peptidoglycan synthesis, D-Ala:D-Ser ATP-grAsp domain; HET: ADP; 2.35A {Enterococcus faecalis}
Probab=100.00 E-value=8.2e-47 Score=385.73 Aligned_cols=312 Identities=18% Similarity=0.135 Sum_probs=242.9
Q ss_pred ceeEEEeeccCCCCCcccccCCCCCCCccEEEEEeCChhHHHHHHHHHhcCCCcEEEEecCCCCCcCC--CCC-------
Q 010065 55 SFFSTVKCLAQKSQPSVSVNAPTNAGQRVVVLVIGGGGREHALCYALKRSHSCDAVFCAPGNAGISNS--GDA------- 125 (519)
Q Consensus 55 ~~~i~v~~GG~s~e~~vS~~s~~~~~~~~~vliiG~g~~~~~l~~~l~~~~g~~~v~~~~~~~~~~~~--~~~------- 125 (519)
+.||+|||||.|+||+||+.||.+ ++++|++. ||+++.++.+..+.+.. ...
T Consensus 3 kkkv~vl~GG~S~E~evSl~Sa~~------------------v~~aL~~~-gy~v~~i~i~~~g~~~~~~~~~~~~~~~~ 63 (357)
T 4fu0_A 3 NKKIAVIFGGNSTEYEVSLQSASA------------------VFENINTN-KFDIIPIGITRSGEWYHYTGEKEKILNNT 63 (357)
T ss_dssp CEEEEEEEECSSTTHHHHHHHHHH------------------HHHHSCTT-TEEEEEEEECTTCCEEEECSCTHHHHTTC
T ss_pred CCEEEEEECCCccchHHHHHHHHH------------------HHHHHhHh-CCEEEEEEEeCCCceeecCCCHHHhhcCc
Confidence 459999999999999999999876 57777665 88887775332222110 000
Q ss_pred -----cccc--CCCCC-C----HHHHHHHHHHcCCcEEEEC-----CChhhHHHHHHHHHHCCCCeeCCcHHHHHHhcCH
Q 010065 126 -----TCIP--DLDVL-D----GDAVISFCRKWSVGLVVVG-----PEAPLVSGLANKLVKAGIPTFGPSSEAAALEGSK 188 (519)
Q Consensus 126 -----~~v~--~~d~~-d----~~~l~~~~~~~~id~Vi~g-----~E~~~~~~~a~~le~~gip~~g~~~~~~~~~~dK 188 (519)
.... ..+.. . .+......+..++|+||+. +|++.+|++ |+.+|+||+|+++.++++++||
T Consensus 64 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~vf~~l~G~~gEdg~~q~~---le~~gip~~G~~~~a~~~~~DK 140 (357)
T 4fu0_A 64 WFEDSKNLCPVVVSQNRSVKGFLEIASDKYRIIKVDLVFPVLHGKNGEDGTLQGI---FELAGIPVVGCDTLSSALCMDK 140 (357)
T ss_dssp GGGCGGGEEEEEECCCTTTCEEEEC----CEEEECSEEEECCCSHHHHSSHHHHH---HHHTTCCBSSCCHHHHHHHHCH
T ss_pred chhhhhccccccccccccccchhhhhhhhHhhcCCCEEEECCcCccccCHHHHHH---HHHCCCcEECcCHHHHHHHhCH
Confidence 0000 00000 0 1112233344579999993 688876665 9999999999999999999999
Q ss_pred HHHHHHHHHcCCCCCCeeecCCHHH---HHHHHHHhCCCEEEEeCCCCCCCcEEEeCCHHHHHHHHHHHHhhccCCCCCC
Q 010065 189 NFMKNLCDKYGIPTAKYKTFTDPNA---AKQYIQEEGAPIVVKADGLAAGKGVIVAMTLEEAYEAVDSMLLKNAFGSAGC 265 (519)
Q Consensus 189 ~~~k~~l~~~Gi~~p~~~~v~~~~~---~~~~~~~~g~P~VvKP~~g~gs~GV~~v~~~~el~~a~~~~~~~~~~~~~~~ 265 (519)
..+|++++++|||+|++..+.+.++ +.++.+++|||+||||++++||+|++++++.+||.++++.++. .+.
T Consensus 141 ~~~k~~l~~~Gip~p~~~~~~~~~~~~~~~~~~~~lg~PvvVKP~~gg~s~Gv~~v~~~~el~~~~~~a~~------~~~ 214 (357)
T 4fu0_A 141 DRAHKLVSLAGISVPKSVTFKRFNEEAAMKEIEANLTYPLFIKPVRAGSSFGITKVIEKQELDAAIELAFE------HDT 214 (357)
T ss_dssp HHHHHHHHHTTCBCCCEEEEEGGGHHHHHHHHHHHCCSSEEEEETTCSSSTTCEEESSHHHHHHHHHHHTT------TCS
T ss_pred HHHHHHHHHCCCCCCCEEeecCCChHHHHHHHHHhcCCCEEEEECCCCCCCceEEeccHHhHHHHHHHHhc------cCC
Confidence 9999999999999999988875443 4566788999999999999999999999999999999998864 568
Q ss_pred cEEEEeccCCcEEEEEEEEeCCeeE-EeccccccccccCCCCCCCCCCceEEecCCCCCHHHHHHHHHHHHHHHHHHHHH
Q 010065 266 RVIIEEFLEGEEASFFALVDGENAI-PLESAQDHKRVGDGDTGPNTGGMGAYSPAPVLTKELQSVVMESIILPTVKGMSA 344 (519)
Q Consensus 266 ~~lvEe~I~G~E~sv~~l~dg~~~~-~~~~~~~~~~~~~~~~~~~~g~~~~~~P~~~l~~~~~~~i~~~a~~~~~~~~~a 344 (519)
.+++|+||+|+|++|.++.++.... ++........++++..++..+......|++ ++++..+++++.|. +++++
T Consensus 215 ~vlvE~~i~G~e~~v~vl~~~~~~~~~v~~~~~~~~~~d~~~k~~~~~~~~~~pa~-l~~~~~~~i~~~A~----~~~~a 289 (357)
T 4fu0_A 215 EVIVEETINGFEVGCAVLGIDELIVGRVDEIELSSGFFDYTEKYTLKSSKIYMPAR-IDAEAEKRIQEAAV----TIYKA 289 (357)
T ss_dssp EEEEEECCCSEEEEEEEEESSSEEECCCEEEEECHHHHTSCSBCSSCCEEEESSCS-CCHHHHHHHHHHHH----HHHHH
T ss_pred eEEEEEecCCEEEEEEEEecCCceEEEEEEEEcccccccccccccCCCceEecCCC-CCHHHHHHHHHHHH----HHHHH
Confidence 9999999999999999998665332 233333445678888888888888888998 99999999998874 68899
Q ss_pred cCCCeeeEEEEEEEEEcCCCceEEEEEeCCCCCCchHHHHHH----hCCCHHHHHHHHHhCCC
Q 010065 345 EGCKFVGVLYAGLMIEKKSGLPKLIEYNVRFGDPECQVLMVR----LESDLAEVLLAACRGEL 403 (519)
Q Consensus 345 ~g~~~~G~~~vdf~~~~~g~~~~viEiN~R~G~~~~~~~~~~----~G~d~~~~~i~~~~g~~ 403 (519)
+|+. |+++|||+++++| ++||+|||||||+|.+ +++|. +|+++.+++.+++.-.+
T Consensus 290 Lg~~--G~~~VDf~~~~dg-~~~vlEvNt~PG~t~~-S~~p~~~~~~G~~~~~li~~li~~al 348 (357)
T 4fu0_A 290 LGCS--GFSRVDMFYTPSG-EIVFNEVNTIPGFTSH-SRYPNMMKGIGLSFSQMLDKLIGLYV 348 (357)
T ss_dssp TTCC--EEEEEEEEECTTC-CEEEEEEESSCCCSTT-CHHHHHHHTTTCCHHHHHHHHHHTTC
T ss_pred hCCc--ceEEEEEEEeCCC-CEEEEEEeCCCCCCcc-cHHHHHHHHhCcCHHHHHHHHHHHHh
Confidence 9987 9999999999887 8999999999999987 66654 39999999888776553
No 11
>3vot_A L-amino acid ligase, BL00235; ATP-grAsp motif, ATP-binding; HET: ADP PG4; 1.80A {Bacillus licheniformis}
Probab=100.00 E-value=3.6e-44 Score=375.13 Aligned_cols=398 Identities=18% Similarity=0.178 Sum_probs=279.6
Q ss_pred CccEEEEEeCChhHHHHHHHHHhcCCCcEEEEecCCCCC-cCCCCCccccCCC-CCCH----HHHHHHHHHcCCcEEEEC
Q 010065 81 QRVVVLVIGGGGREHALCYALKRSHSCDAVFCAPGNAGI-SNSGDATCIPDLD-VLDG----DAVISFCRKWSVGLVVVG 154 (519)
Q Consensus 81 ~~~~vliiG~g~~~~~l~~~l~~~~g~~~v~~~~~~~~~-~~~~~~~~v~~~d-~~d~----~~l~~~~~~~~id~Vi~g 154 (519)
++++++|+|+|.....+.+++++. |++++++++..... ......+....++ ..|. +.+.+++++.++|+|++.
T Consensus 4 ~~k~l~Il~~~~~~~~i~~aa~~l-G~~vv~v~~~~~~~~~~~~~~d~~~~~~~~~d~~~~~~~~~~~~~~~~id~V~~~ 82 (425)
T 3vot_A 4 RNKNLAIICQNKHLPFIFEEAERL-GLKVTFFYNSAEDFPGNLPAVERCVPLPLFEDEEAAMDVVRQTFVEFPFDGVMTL 82 (425)
T ss_dssp CCCEEEEECCCTTCCHHHHHHHHT-TCEEEEEEETTSCCCCSCTTEEEEEEECTTTCHHHHHHHHHHHHHHSCCSEEECC
T ss_pred CCcEEEEECCChhHHHHHHHHHHC-CCEEEEEECCCcccccCHhhccEEEecCCCCCHHHHHHHHHHhhhhcCCCEEEEC
Confidence 357888888875433445555544 99999987653222 1111122111222 3443 445556677899999998
Q ss_pred CChhhHHHHHHHHHHCCCCeeCCcHHHHHHhcCHHHHHHHHHHcCCCCCCeeecCCHHHHHHHHHHhCCCEEEEeCCCCC
Q 010065 155 PEAPLVSGLANKLVKAGIPTFGPSSEAAALEGSKNFMKNLCDKYGIPTAKYKTFTDPNAAKQYIQEEGAPIVVKADGLAA 234 (519)
Q Consensus 155 ~E~~~~~~~a~~le~~gip~~g~~~~~~~~~~dK~~~k~~l~~~Gi~~p~~~~v~~~~~~~~~~~~~g~P~VvKP~~g~g 234 (519)
.|.... ..+...+.+|+| |++++++.+++||..||++|+++|||+|++..+++.+++.. .+++||+||||..++|
T Consensus 83 ~e~~~~-~~a~l~e~lglp--g~~~~~~~~~~dK~~~k~~l~~~gip~p~~~~~~~~~~~~~--~~~g~P~vvKp~~g~g 157 (425)
T 3vot_A 83 FEPALP-FTAKAAEALNLP--GLPFTTMENCRNKNKTRSILQQNGLNTPVFHEFHTLADLEN--RKLSYPLVVKPVNGFS 157 (425)
T ss_dssp CGGGHH-HHHHHHHHTTCS--SCCHHHHHHHHCHHHHHHHHHHTTCCCCCEEEESSGGGGTT--CCCCSSEEEEESCC--
T ss_pred CchhHH-HHHHHHHHcCCC--CCCHHHHHHhhCHHHHHHHHHHCCCCCCceeccCcHHHHHH--hhcCCcEEEEECCCCC
Confidence 877653 346667899999 99999999999999999999999999999999999888754 5789999999999999
Q ss_pred CCcEEEeCCHHHHHHHHHHHHhhcc-----CCCCCCcEEEEeccCCcEEEEEEEEeCCeeEEeccccccccccCCCCCCC
Q 010065 235 GKGVIVAMTLEEAYEAVDSMLLKNA-----FGSAGCRVIIEEFLEGEEASFFALVDGENAIPLESAQDHKRVGDGDTGPN 309 (519)
Q Consensus 235 s~GV~~v~~~~el~~a~~~~~~~~~-----~~~~~~~~lvEe~I~G~E~sv~~l~dg~~~~~~~~~~~~~~~~~~~~~~~ 309 (519)
|+||+++++.+|+.++++.+..... +...+..+++|+||+|+|++++++.+++....+....... ..+++
T Consensus 158 s~Gv~~v~~~~el~~a~~~~~~~~~~~~~~~~~~~~~~lvEe~i~G~e~sv~~~~~~g~~~~~~~~~~~~-----~~~~~ 232 (425)
T 3vot_A 158 SQGVVRVDDRKELEEAVRKVEAVNQRDLNRFVHGKTGIVAEQFIDGPEFAIETLSIQGNVHVLSIGYKGN-----SKGPF 232 (425)
T ss_dssp ---CEEECSHHHHHHHHHHHHHHTTSSHHHHHTTCCCEEEEECCCSCEEEEEEEEETTEEEEEEEEEEEC-----CCCSB
T ss_pred CCCceEechHHHHHHHHHHHHhhhhhhhhhhccCCCcEEEEEEecCcEEEEEEEEeCCcEEEEeEEEEec-----cCCCc
Confidence 9999999999999999988764211 1123578999999999999999998655444443332221 12345
Q ss_pred CCCceEEecCCCCCHHHHHHHHHHHHHHHHHHHHHcCCCeeeEEEEEEEEEcCCCceEEEEEeCCCCCCchHH-HH-HHh
Q 010065 310 TGGMGAYSPAPVLTKELQSVVMESIILPTVKGMSAEGCKFVGVLYAGLMIEKKSGLPKLIEYNVRFGDPECQV-LM-VRL 387 (519)
Q Consensus 310 ~g~~~~~~P~~~l~~~~~~~i~~~a~~~~~~~~~a~g~~~~G~~~vdf~~~~~g~~~~viEiN~R~G~~~~~~-~~-~~~ 387 (519)
+.+.+++.|++ ++++..+++.+.+ .++++++|+. +|++|+||+++++| ++||+|+||||||+..+. +. ..+
T Consensus 233 ~~~~~~~~Pa~-l~~~~~~~i~~~~----~~~~~alg~~-~G~~~ve~~~~~dG-~~~~iEiN~R~gG~~~~~~l~~~~~ 305 (425)
T 3vot_A 233 FEEGVYIAPAQ-LKEETRLAIVKEV----TGAVSALGIH-QGPAHTELRLDKDG-TPYVIEVGARIGGSGVSHYIVKEST 305 (425)
T ss_dssp CCCCEEEESCC-CCHHHHHHHHHHH----HHHHHHTTCC-SEEEEEEEEECTTC-CEEEEEEESSCGGGGHHHHHHHHHH
T ss_pred cccceEeeccc-CCHHHHHHHHHHH----HHHHHHcCCC-cceEEEEEEEEeCC-cEEEEEEecCCCCCCchHHHHHHHH
Confidence 55678889999 8998888888776 4688899986 39999999999987 899999999998876543 33 346
Q ss_pred CCCHHHHHHHHHhCCCCCCCc--ccCCC-cEEEEEEecCCCCCCCCCCcccccchhhhccCCCeEEEEeeeeecCCCcE-
Q 010065 388 ESDLAEVLLAACRGELTGVTL--NWSPG-SAMVVVMASKGYPGSYEKGSEIQNLEEAEQVAPSVKIFHAGTALDADGNF- 463 (519)
Q Consensus 388 G~d~~~~~i~~~~g~~~~~~~--~~~~~-~a~~~~l~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~g~~- 463 (519)
|+|+.+++++.++|....... ...+. .+..+++. ...++.. ..+.+++++.+ .+++..++... +.|..
T Consensus 306 G~d~~~~~i~~alg~~~~~~~~~~~~~~~~~~~~~~~-~~~~G~~---~~i~g~~~~~~-~p~v~~~~~~~---~~G~~v 377 (425)
T 3vot_A 306 GINFMQLVLQNALKPLESSEFEGEIRPVRTAGNYIIP-VQGSGTF---EKIDGLEEVKQ-RQEVKRVFQFM---RRGAKI 377 (425)
T ss_dssp CCCHHHHHHHHHHSCCCGGGSCSCCCCSSEEEEEECC-CCSCEEE---EEEETHHHHHT-CTTEEEEEECC---CTTCEE
T ss_pred CCCHHHHHHHHHCCCccccccccccccceEEEEEEEc-CCCCeEE---EecCCHHHHhc-CCCeEEEEEEe---cCCCEe
Confidence 999999999999997443322 22222 33333322 2223322 35778888765 34543222111 23432
Q ss_pred ---EecCCeEEEEEEecCCHHHHHHHHHHHhhccccCCeeecccccc
Q 010065 464 ---IATGGRVLGVTAKGKDVEEAQDRAYLAVEEINWPGGFYRRDIGW 507 (519)
Q Consensus 464 ---~~~~~rvg~vi~~g~t~~ea~~~a~~~~~~i~~~g~~~r~dig~ 507 (519)
.++++|+|+|++.|+|.+||+++++++.+.|+| .|++||.-
T Consensus 378 ~~~~~~~~~~g~v~~~g~~~~ea~~~~~~~~~~i~i---~~~~~i~~ 421 (425)
T 3vot_A 378 LPYPHFSGYPGFILTSHHSYEECEAFYRELDDELHI---IYQNNLTG 421 (425)
T ss_dssp CCTTCCCCCSEEEEEEESSHHHHHHHHHHHHHHCEE---EECC----
T ss_pred CCCCCCCCeEEEEEEEECCHHHHHHHHHHHhCccEE---EEeCCCCc
Confidence 246789999999999999999999999999985 69999864
No 12
>3k3p_A D-alanine--D-alanine ligase; D-alanyl-alanine synthetase, ATP-binding, cell shape, cell W biogenesis/degradation, magnesium, manganese; 2.23A {Streptococcus mutans}
Probab=100.00 E-value=5.3e-46 Score=381.45 Aligned_cols=304 Identities=13% Similarity=0.086 Sum_probs=221.9
Q ss_pred ceeEEEeeccCCCCCcccccCCCCCCCccEEEEEeCChhHHHHHHHHHhcCCCcEEEEecCCCCCcCCCC--Ccccc---
Q 010065 55 SFFSTVKCLAQKSQPSVSVNAPTNAGQRVVVLVIGGGGREHALCYALKRSHSCDAVFCAPGNAGISNSGD--ATCIP--- 129 (519)
Q Consensus 55 ~~~i~v~~GG~s~e~~vS~~s~~~~~~~~~vliiG~g~~~~~l~~~l~~~~g~~~v~~~~~~~~~~~~~~--~~~v~--- 129 (519)
+|||+|||||.|+||+||+.||.+ +..+|.+. |++++.++.+..+.+.... ...+.
T Consensus 37 ~~~v~vl~GG~S~E~evSl~Sa~~------------------v~~al~~~-~~~v~~i~i~~~g~~~~~~~~~~~~~~~~ 97 (383)
T 3k3p_A 37 KETLVLLYGGRSAERDVSVLSAES------------------VMRAINYD-NFLVKTYFITQAGDFIKTQEFDSQPSETD 97 (383)
T ss_dssp CEEEEEEEECSSTTHHHHHHHHHH------------------HHHHSCTT-TEEEEEEEECTTSCEEEEEEESSCCC--C
T ss_pred CCeEEEEeCCCCCcchHHHHHHHH------------------HHHHhhhc-CCEEEEEEecCCCCEEecccccccccccc
Confidence 569999999999999999999876 56777655 8888888765443332100 00000
Q ss_pred CCCCC---------CHHHHHHHHHHcCCcEEEE-----CCChhhHHHHHHHHHHCCCCeeCCcHHHHHHhcCHHHHHHHH
Q 010065 130 DLDVL---------DGDAVISFCRKWSVGLVVV-----GPEAPLVSGLANKLVKAGIPTFGPSSEAAALEGSKNFMKNLC 195 (519)
Q Consensus 130 ~~d~~---------d~~~l~~~~~~~~id~Vi~-----g~E~~~~~~~a~~le~~gip~~g~~~~~~~~~~dK~~~k~~l 195 (519)
..... +...+ . .++|+||| .+||+.++++ |+.+|+||+|+++.++++++||..+|++|
T Consensus 98 ~~~~~~~~~~~~~~~~~~~---~--~~~D~vf~~lhG~~GEdg~iq~l---le~~gipy~G~~~~a~~~~~DK~~~k~~l 169 (383)
T 3k3p_A 98 KLMTNDTIIASQKIKPSDI---Y--EEEAVVFPVLHGPMGEDGSIQGF---LEVLKMPYVGTNILSSSVAMDKITTNQVL 169 (383)
T ss_dssp CCCCTTSCCGGGEECGGGG---C--CTTCEEEEECCSTTTSSSHHHHH---HHHTTCCBSSCCHHHHHHHHCHHHHHHHH
T ss_pred ccccccccccccccccccc---c--cCCCEEEEcCCCCCcchHHHHHH---HHHcCCCccCCCHHHHHHHhCHHHHHHHH
Confidence 00000 00011 0 37899999 2799977665 99999999999999999999999999999
Q ss_pred HHcC-CCCCCeeecCCH----HHHHHHHHHhCCCEEEEeCCCCCCCcEEEeCCHHHHHHHHHHHHhhccCCCCCCcEEEE
Q 010065 196 DKYG-IPTAKYKTFTDP----NAAKQYIQEEGAPIVVKADGLAAGKGVIVAMTLEEAYEAVDSMLLKNAFGSAGCRVIIE 270 (519)
Q Consensus 196 ~~~G-i~~p~~~~v~~~----~~~~~~~~~~g~P~VvKP~~g~gs~GV~~v~~~~el~~a~~~~~~~~~~~~~~~~~lvE 270 (519)
+++| ||+|++..+.+. +++.++.++++||+||||..+++|.||.++++.+|+.++++.++. .+..+|||
T Consensus 170 ~~~G~Ipvp~~~~~~~~~~~~~~~~~~~~~lg~PvvVKP~~ggss~GV~~v~~~~el~~al~~a~~------~~~~vlVE 243 (383)
T 3k3p_A 170 ESATTIPQVAYVALIEGEPLESKLAEVEEKLIYPVFVKPANMGSSVGISKAENRTDLKQAIALALK------YDSRVLIE 243 (383)
T ss_dssp HHHCCCCBCCEEEEETTSCHHHHHHHHHHHCCSSEEEEECC------CEEESSHHHHHHHHHHHHH------HCSEEEEE
T ss_pred HhCCCcCCCCEEEEeCccchhHHHHHHHHhcCCCEEEEeCCCCCCCCEEEECCHHHHHHHHHHHHh------CCCeEEEE
Confidence 9999 999999998776 466777889999999999999999999999999999999998875 45789999
Q ss_pred eccCCcEEEEEEEEeCCe-eEEeccccccccccCCCCCCCCCCceEEecCCCCCHHHHHHHHHHHHHHHHHHHHHcCCCe
Q 010065 271 EFLEGEEASFFALVDGEN-AIPLESAQDHKRVGDGDTGPNTGGMGAYSPAPVLTKELQSVVMESIILPTVKGMSAEGCKF 349 (519)
Q Consensus 271 e~I~G~E~sv~~l~dg~~-~~~~~~~~~~~~~~~~~~~~~~g~~~~~~P~~~l~~~~~~~i~~~a~~~~~~~~~a~g~~~ 349 (519)
+||+|+|++|.++.|+.. +.+.........+++++.+|..+.....+|++ ++++..+++++.+ .++++++|++
T Consensus 244 e~I~G~E~~v~vl~d~~~~~~~~~ei~~~~~~~d~~~ky~~g~~~~~~Pa~-l~~~~~~~i~~~a----~~~~~aLg~~- 317 (383)
T 3k3p_A 244 QGVDAREIEVGILGNTDVKTTLPGEIVKDVAFYDYEAKYIDNKITMAIPAE-IDPVIVEKMRDYA----ATAFRTLGCC- 317 (383)
T ss_dssp ECCCSEEEEEEEEESSSCEECCCEEEC-----------------CEESSCC-CCHHHHHHHHHHH----HHHHHHTTCC-
T ss_pred cCCCCeEEEEEEEeCCCeeEEeeEEEecCCCccchhhcccCCCeeEEecCC-CCHHHHHHHHHHH----HHHHHHcCCc-
Confidence 999999999999987652 22223333344688999999888888999999 9999999988877 4688999988
Q ss_pred eeEEEEEEEEEcCCCceEEEEEeCCCCCCchHHHHHH----hCCCHHHHHHHHHh
Q 010065 350 VGVLYAGLMIEKKSGLPKLIEYNVRFGDPECQVLMVR----LESDLAEVLLAACR 400 (519)
Q Consensus 350 ~G~~~vdf~~~~~g~~~~viEiN~R~G~~~~~~~~~~----~G~d~~~~~i~~~~ 400 (519)
|++++||+++++| ++||+|||||||+|.+ +++|. .|+|+.+++.+++.
T Consensus 318 -G~~~vDf~~~~~g-~~~vlEINtrPG~t~~-S~~p~~~~a~Gi~~~~li~~li~ 369 (383)
T 3k3p_A 318 -GLSRCDFFLTEDG-KVYLNELNTMPGFTQW-SMYPLLWENMGLSYSVLIEELVS 369 (383)
T ss_dssp -EEEEEEEEECTTC-CEEEEEEESSCCCC---CHHHHHHHHTTCCHHHHHHHHHH
T ss_pred -eEEEEEEEEECCC-CEEEEEeeCCCCCCcc-cHHHHHHHHhCCCHHHHHHHHHH
Confidence 9999999999876 8999999999999876 56654 39999998877654
No 13
>3i12_A D-alanine-D-alanine ligase A; D-alanyl-alanine synthetase A, ADP binding protein, csgid, A binding, cell shape; HET: ADP; 2.20A {Salmonella typhimurium} PDB: 3q1k_A*
Probab=100.00 E-value=7.2e-46 Score=379.61 Aligned_cols=310 Identities=16% Similarity=0.154 Sum_probs=241.6
Q ss_pred cceeEEEeeccCCCCCcccccCCCCCCCccEEEEEeCChhHHHHHHHHHhcCCCcEEEEecCCCCCcCCC-CCcc-cc--
Q 010065 54 SSFFSTVKCLAQKSQPSVSVNAPTNAGQRVVVLVIGGGGREHALCYALKRSHSCDAVFCAPGNAGISNSG-DATC-IP-- 129 (519)
Q Consensus 54 ~~~~i~v~~GG~s~e~~vS~~s~~~~~~~~~vliiG~g~~~~~l~~~l~~~~g~~~v~~~~~~~~~~~~~-~~~~-v~-- 129 (519)
.+|||+|||||.|+||+||+.||++ ++.+|.+. |++++.++.+..+.+... .... +.
T Consensus 2 ~~~~v~vl~GG~S~E~evSl~S~~~------------------v~~al~~~-~~~v~~i~i~~~~~~~~~~~~~~~~~~~ 62 (364)
T 3i12_A 2 AKLRVGIVFGGKSAEHEVSLQSAKN------------------IVDAIDKT-RFDVVLLGIDKAGQWHVNDAENYLQNAD 62 (364)
T ss_dssp CCEEEEEEEECSSTTHHHHHHHHHH------------------HHHHSCTT-TEEEEEEEECTTSCEEEECSSSSBSSTT
T ss_pred CccEEEEEeccCCCCccchHHHHHH------------------HHHHHhhc-CCeEEEEEECCCCCEEecccchhhhccc
Confidence 3689999999999999999999876 56666555 788877775543332210 0000 00
Q ss_pred --------------CCCCCCH-HHHH---HHHHHcCCcEEEEC-----CChhhHHHHHHHHHHCCCCeeCCcHHHHHHhc
Q 010065 130 --------------DLDVLDG-DAVI---SFCRKWSVGLVVVG-----PEAPLVSGLANKLVKAGIPTFGPSSEAAALEG 186 (519)
Q Consensus 130 --------------~~d~~d~-~~l~---~~~~~~~id~Vi~g-----~E~~~~~~~a~~le~~gip~~g~~~~~~~~~~ 186 (519)
.+.+... ..+. ......++|+|||. +||+.++++ |+.+|+||+|+++.++++++
T Consensus 63 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~vf~~lhG~~gEdg~iq~~---le~~gip~~G~~~~a~~~~~ 139 (364)
T 3i12_A 63 DPAHIALRPSAISLAQVPGKHQHQLINAQNGQPLPTVDVIFPIVHGTLGEDGSLQGM---LRVANLPFVGSDVLSSAACM 139 (364)
T ss_dssp CTTTCCBCCCSCBEEECTTCSSSCEEETTTCCBCCCCSEEEECCCSTTTTSSHHHHH---HHHTTCCBSSCCHHHHHHHH
T ss_pred cccccccccccccceecccccccceeccccccccCCCCEEEEeCCCCCCcCHHHHHH---HHHcCCCccCCCHHHHHHHH
Confidence 0000000 0000 00013479999993 699876665 99999999999999999999
Q ss_pred CHHHHHHHHHHcCCCCCCeeecCCHH----HHHHHHHHhCCCEEEEeCCCCCCCcEEEeCCHHHHHHHHHHHHhhccCCC
Q 010065 187 SKNFMKNLCDKYGIPTAKYKTFTDPN----AAKQYIQEEGAPIVVKADGLAAGKGVIVAMTLEEAYEAVDSMLLKNAFGS 262 (519)
Q Consensus 187 dK~~~k~~l~~~Gi~~p~~~~v~~~~----~~~~~~~~~g~P~VvKP~~g~gs~GV~~v~~~~el~~a~~~~~~~~~~~~ 262 (519)
||..+|++++++|||+|++..+.+.+ ++.++.++++||+||||..+++|.||.++++.+|+.++++.++.
T Consensus 140 DK~~~k~~l~~~Gip~p~~~~~~~~~~~~~~~~~~~~~lg~PvvVKP~~ggss~Gv~~v~~~~el~~a~~~a~~------ 213 (364)
T 3i12_A 140 DKDVAKRLLRDAGLNIAPFITLTRTNRHAFSFAEVESRLGLPLFVKPANQGSSVGVSKVANEAQYQQAVALAFE------ 213 (364)
T ss_dssp CHHHHHHHHHHTTCCBCCEEEEETTTGGGCCHHHHHHHHCSSEEEEETTCCTTTTCEEESSHHHHHHHHHHHHH------
T ss_pred CHHHHHHHHHHCCCCCCCEEEEEccccchhhHHHHHHhcCCCEEEEECCCCCCcCeEEeCCHHHHHHHHHHHHh------
Confidence 99999999999999999999998877 77788889999999999999999999999999999999998875
Q ss_pred CCCcEEEEeccCCcEEEEEEEEeCC-eeEEeccccccccccCCCCCCCCCC-ceEEecCCCCCHHHHHHHHHHHHHHHHH
Q 010065 263 AGCRVIIEEFLEGEEASFFALVDGE-NAIPLESAQDHKRVGDGDTGPNTGG-MGAYSPAPVLTKELQSVVMESIILPTVK 340 (519)
Q Consensus 263 ~~~~~lvEe~I~G~E~sv~~l~dg~-~~~~~~~~~~~~~~~~~~~~~~~g~-~~~~~P~~~l~~~~~~~i~~~a~~~~~~ 340 (519)
.+..+|||+||+|+|++|.++.++. .+.+...+.....+++++.+|..+. +.+++|++ ++++..+++++.+ .+
T Consensus 214 ~~~~vlVEe~I~G~E~~v~vl~~~~~~~~~~~ei~~~~~~~~~~~ky~~~~~~~~~~Pa~-l~~~~~~~i~~~a----~~ 288 (364)
T 3i12_A 214 FDHKVVVEQGIKGREIECAVLGNDNPQASTCGEIVLNSEFYAYDTKYIDDNGAQVVVPAQ-IPSEVNDKIRAIA----IQ 288 (364)
T ss_dssp HCSEEEEEECCCSEEEEEEEEESSSCEEEEEEEEECCTTCC--TTTTSGGGGCEEESSCS-SCHHHHHHHHHHH----HH
T ss_pred cCCcEEEEcCcCCeEEEEEEEeCCCceEeeeEEEecCCCccCHHHcccCCCceEEEeCCC-CCHHHHHHHHHHH----HH
Confidence 3578999999999999999997654 2333444434446888898987766 78889999 9999988888877 46
Q ss_pred HHHHcCCCeeeEEEEEEEEEcCCCceEEEEEeCCCCCCchHHHHHH----hCCCHHHHHHHHHh
Q 010065 341 GMSAEGCKFVGVLYAGLMIEKKSGLPKLIEYNVRFGDPECQVLMVR----LESDLAEVLLAACR 400 (519)
Q Consensus 341 ~~~a~g~~~~G~~~vdf~~~~~g~~~~viEiN~R~G~~~~~~~~~~----~G~d~~~~~i~~~~ 400 (519)
+++++|+. |++|+||+++++| ++|++|||+|||++.+ +++|. .|+|+.+++.+++.
T Consensus 289 ~~~alg~~--G~~~vD~~~~~~g-~~~vlEiN~~Pg~t~~-s~~p~~~~a~G~~~~~l~~~li~ 348 (364)
T 3i12_A 289 AYQTLGCA--GMARVDVFLTADN-EVVINEINTLPGFTNI-SMYPKLWQASGLGYTDLISRLIE 348 (364)
T ss_dssp HHHHTTCC--EEEEEEEEECTTC-CEEEEEEESSCCCSTT-CHHHHHHHTTTCCHHHHHHHHHH
T ss_pred HHHHhCCc--eEEEEEEEEecCC-CEEEEEeeCCCCCCCC-CHHHHHHHHhCcCHHHHHHHHHH
Confidence 88999987 9999999999877 8999999999999876 55544 49999998877654
No 14
>3e5n_A D-alanine-D-alanine ligase A; bacterial blight; 2.00A {Xanthomonas oryzae PV} PDB: 3r5f_A* 3rfc_A*
Probab=100.00 E-value=5e-46 Score=382.78 Aligned_cols=309 Identities=17% Similarity=0.147 Sum_probs=231.3
Q ss_pred cceeEEEeeccCCCCCcccccCCCCCCCccEEEEEeCChhHHHHHHHHHhcCCCcEEEEecCCCCCcCCCCC--------
Q 010065 54 SSFFSTVKCLAQKSQPSVSVNAPTNAGQRVVVLVIGGGGREHALCYALKRSHSCDAVFCAPGNAGISNSGDA-------- 125 (519)
Q Consensus 54 ~~~~i~v~~GG~s~e~~vS~~s~~~~~~~~~vliiG~g~~~~~l~~~l~~~~g~~~v~~~~~~~~~~~~~~~-------- 125 (519)
.+|||+|||||.|+||+||+.||.+ ++.+|.+. |++++.++.+..+.+.....
T Consensus 21 ~~~~v~vl~GG~S~E~evSl~Sa~~------------------v~~al~~~-~~~v~~i~i~~~~~~~~~~~~~~~~~~~ 81 (386)
T 3e5n_A 21 RKIRVGLIFGGKSAEHEVSLQSARN------------------ILDALDPQ-RFEPVLIGIDKQGQWHVNDPDSFLLHAD 81 (386)
T ss_dssp CCEEEEEEEECSSTTHHHHHHHHHH------------------HHHHSCTT-TEEEEEEEECTTSCEEEECGGGSEESTT
T ss_pred CCceEEEEeccCCCCchhHHHHHHH------------------HHHHhCcc-CCEEEEEEECCCCCEEecccchhhcccc
Confidence 5789999999999999999999876 56666554 78777776554332221000
Q ss_pred -----------ccccCCCCCCHH-HH---HHHHHHcCCcEEEEC-----CChhhHHHHHHHHHHCCCCeeCCcHHHHHHh
Q 010065 126 -----------TCIPDLDVLDGD-AV---ISFCRKWSVGLVVVG-----PEAPLVSGLANKLVKAGIPTFGPSSEAAALE 185 (519)
Q Consensus 126 -----------~~v~~~d~~d~~-~l---~~~~~~~~id~Vi~g-----~E~~~~~~~a~~le~~gip~~g~~~~~~~~~ 185 (519)
..+ .+.+.+.. .+ .......++|+|||. +||+.++++ |+.+|+||+|+++.+++++
T Consensus 82 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~D~vf~~lhG~~gEdg~iq~l---le~~gipy~G~~~~a~~~~ 157 (386)
T 3e5n_A 82 DPARIALHRSGRGV-ALLPGAQQQQLRPIQPEQALAQIDVVFPIVHGTLGEDGSLQGL---LRMANLPFVGSGVLGSAVA 157 (386)
T ss_dssp CTTTCEECCCCCCE-EECTTCSSSCEEECC--CCCCCCSEEEEEECSHHHHSSHHHHH---HHHTTCCBSSCCHHHHHHH
T ss_pred ccccccccccccce-eeccCccccceeccccccccCCCCEEEEcCCCCCCcCHHHHHH---HHHcCCCccCCCHHHHHHH
Confidence 000 00000000 00 000123579999993 688876655 9999999999999999999
Q ss_pred cCHHHHHHHHHHcCCCCCCeeecCCHH----HHHHHHHHhCCCEEEEeCCCCCCCcEEEeCCHHHHHHHHHHHHhhccCC
Q 010065 186 GSKNFMKNLCDKYGIPTAKYKTFTDPN----AAKQYIQEEGAPIVVKADGLAAGKGVIVAMTLEEAYEAVDSMLLKNAFG 261 (519)
Q Consensus 186 ~dK~~~k~~l~~~Gi~~p~~~~v~~~~----~~~~~~~~~g~P~VvKP~~g~gs~GV~~v~~~~el~~a~~~~~~~~~~~ 261 (519)
+||..+|++++++|||+|++..+.+.+ ++.++.++++||+||||..++||.||+++++.+|+.++++.++.
T Consensus 158 ~DK~~~k~~l~~~GIp~p~~~~~~~~~~~~~~~~~~~~~lg~PvvVKP~~ggss~Gv~~v~~~~el~~a~~~a~~----- 232 (386)
T 3e5n_A 158 MDKDMAKRVLRDARLAVAPFVCFDRHTAAHADVDTLIAQLGLPLFVKPANQGSSVGVSQVRTADAFAAALALALA----- 232 (386)
T ss_dssp HBHHHHHHHHHHTTCCBCCEEEEEHHHHTTCCHHHHHHHHCSSEEEEESBSCSSTTCEEECSGGGHHHHHHHHTT-----
T ss_pred hCHHHHHHHHHHCCCCCCCEEEEeCcccchhhHHHHHHhcCCCEEEEECCCCcCCCEEEECCHHHHHHHHHHHHh-----
Confidence 999999999999999999999998877 67778889999999999999999999999999999999998863
Q ss_pred CCCCcEEEEeccCCcEEEEEEEEeCC-eeEEeccccccccccCCCCCCCCCC-ceEEecCCCCCHHHHHHHHHHHHHHHH
Q 010065 262 SAGCRVIIEEFLEGEEASFFALVDGE-NAIPLESAQDHKRVGDGDTGPNTGG-MGAYSPAPVLTKELQSVVMESIILPTV 339 (519)
Q Consensus 262 ~~~~~~lvEe~I~G~E~sv~~l~dg~-~~~~~~~~~~~~~~~~~~~~~~~g~-~~~~~P~~~l~~~~~~~i~~~a~~~~~ 339 (519)
.+..+|||+||+|+|++|.++.++. .+.+.........+++++.+|..++ +..++|++ ++++..+++++.+ .
T Consensus 233 -~~~~vlVEe~I~G~E~~v~vl~~~~~~~~~~gei~~~~~~~d~~~ky~~~~~~~~~~Pa~-l~~~~~~~i~~~a----~ 306 (386)
T 3e5n_A 233 -YDHKVLVEAAVAGREIECAVLGNAVPHASVCGEVVVHDAFYSYATKYISEHGAEIVIPAD-IDAQTQQRIQQIA----V 306 (386)
T ss_dssp -TCSEEEEEECCCSEEEEEEEECSSSCEEEEEEEECC-----------------CEESSCS-SCHHHHHHHHHHH----H
T ss_pred -CCCcEEEEcCCCCeEEEEEEEeCCCceEEEeEEEEeCCcccchhcccCCCCCeEEEECCC-CCHHHHHHHHHHH----H
Confidence 5678999999999999999997654 3333334444445788888887644 78889999 9999998888877 4
Q ss_pred HHHHHcCCCeeeEEEEEEEEEcCCCceEEEEEeCCCCCCchHHHHHH----hCCCHHHHHHHHHh
Q 010065 340 KGMSAEGCKFVGVLYAGLMIEKKSGLPKLIEYNVRFGDPECQVLMVR----LESDLAEVLLAACR 400 (519)
Q Consensus 340 ~~~~a~g~~~~G~~~vdf~~~~~g~~~~viEiN~R~G~~~~~~~~~~----~G~d~~~~~i~~~~ 400 (519)
++++++|+. |++++||+++++| ++|++|||||||+|.+ +++|. .|+|+.+++.+++.
T Consensus 307 ~~~~aLg~~--G~~~vDf~~~~dg-~~~vlEiN~~PG~t~~-S~~p~~~~~~Gi~~~~li~~li~ 367 (386)
T 3e5n_A 307 QAYQALGCA--GMARVDVFLCADG-RIVINEVNTLPGFTRI-SVYPKLWQASGLDYRGLITRLIE 367 (386)
T ss_dssp HHHHHHTCC--SEEEEEEEECTTC-CEEEEEEESSCCCSTT-CHHHHHHHTTTCCHHHHHHHHHH
T ss_pred HHHHHhCCc--cEEEEEEEEECCC-cEEEEEeECCCCCCcc-CHHHHHHHHhCCCHHHHHHHHHH
Confidence 688999987 9999999999887 8999999999999887 66664 39999998877654
No 15
>3lwb_A D-alanine--D-alanine ligase; DDL, D-alanyl--D-alanine ligase RV2981C, structural genomics, TB structural GENO consortium, TBSGC; 2.10A {Mycobacterium tuberculosis}
Probab=100.00 E-value=2.9e-45 Score=375.67 Aligned_cols=310 Identities=20% Similarity=0.215 Sum_probs=229.4
Q ss_pred ccceeEEEeeccCCCCCcccccCCCCCCCccEEEEEeCChhHHHHHHHHHhcCCCcEEEEecCCCCCcCCCCC--ccc--
Q 010065 53 KSSFFSTVKCLAQKSQPSVSVNAPTNAGQRVVVLVIGGGGREHALCYALKRSHSCDAVFCAPGNAGISNSGDA--TCI-- 128 (519)
Q Consensus 53 ~~~~~i~v~~GG~s~e~~vS~~s~~~~~~~~~vliiG~g~~~~~l~~~l~~~~g~~~v~~~~~~~~~~~~~~~--~~v-- 128 (519)
..++||+|||||.|+||+||+.||.+ +..+|.+. +|+++.+..+..+.|..... ..+
T Consensus 8 ~~~~~v~vl~GG~S~E~~vS~~sa~~------------------v~~~l~~~-~~~v~~i~i~~~g~w~~~~~~~~~~~~ 68 (373)
T 3lwb_A 8 DRRVRVAVVFGGRSNEHAISCVSAGS------------------ILRNLDSR-RFDVIAVGITPAGSWVLTDANPDALTI 68 (373)
T ss_dssp TTCEEEEEEEEC-----CHHHHHHHH------------------HHHHSCTT-TEEEEEEEECTTCCEEEECCC------
T ss_pred cCCcEEEEEecCCCCChhhHHHHHHH------------------HHHHhhhc-CceEEEEEecCCCCeEecCchhhhhhc
Confidence 36789999999999999999999877 44555433 56655554333332221100 000
Q ss_pred -----cCCCCCCHHHH-HH-------H---------HHHcCCcEEEEC-----CChhhHHHHHHHHHHCCCCeeCCcHHH
Q 010065 129 -----PDLDVLDGDAV-IS-------F---------CRKWSVGLVVVG-----PEAPLVSGLANKLVKAGIPTFGPSSEA 181 (519)
Q Consensus 129 -----~~~d~~d~~~l-~~-------~---------~~~~~id~Vi~g-----~E~~~~~~~a~~le~~gip~~g~~~~~ 181 (519)
+.++......+ +. + ....++|+|||. +||+.+|++ |+.+|+||+|+++.+
T Consensus 69 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~vfp~lhG~~gEdg~iq~l---le~~gip~vG~~~~a 145 (373)
T 3lwb_A 69 TNRELPQVKSGSGTELALPADPRRGGQLVSLPPGAGEVLESVDVVFPVLHGPYGEDGTIQGL---LELAGVPYVGAGVLA 145 (373)
T ss_dssp ----------------------------CCCCTTHHHHHHTCSEEEECCEETTEECCHHHHH---HHHHTCCBSSSCHHH
T ss_pred ccccccccccccccceEeeccccccceeeccccccccccCCccEEEECCCCCCCccHHHHHH---HHHcCCCccCCcHHH
Confidence 00000000000 00 0 012369999993 689977666 999999999999999
Q ss_pred HHHhcCHHHHHHHHHHcCCCCCCeeecCCHHH--HHHHHHHhCCCEEEEeCCCCCCCcEEEeCCHHHHHHHHHHHHhhcc
Q 010065 182 AALEGSKNFMKNLCDKYGIPTAKYKTFTDPNA--AKQYIQEEGAPIVVKADGLAAGKGVIVAMTLEEAYEAVDSMLLKNA 259 (519)
Q Consensus 182 ~~~~~dK~~~k~~l~~~Gi~~p~~~~v~~~~~--~~~~~~~~g~P~VvKP~~g~gs~GV~~v~~~~el~~a~~~~~~~~~ 259 (519)
+++++||..+|++|+++|||+|++..+.+.++ ..+..++++||+||||.+++||.||+++++.+||.++++.++.
T Consensus 146 ~~~~~DK~~~k~~l~~~GIp~p~~~~~~~~~~~~~~~~~~~lg~PvvVKP~~ggss~GV~~v~~~~eL~~a~~~a~~--- 222 (373)
T 3lwb_A 146 SAVGMDKEFTKKLLAADGLPVGAYAVLRPPRSTLHRQECERLGLPVFVKPARGGSSIGVSRVSSWDQLPAAVARARR--- 222 (373)
T ss_dssp HHHHHBHHHHHHHHHHTTCCBCCEEEECTTCCCCCHHHHHHHCSCEEEEESBCSTTTTCEEECSGGGHHHHHHHHHT---
T ss_pred HHHHcCHHHHHHHHHHcCcCCCCEEEEECcccchhHHHHHhcCCCEEEEeCCCCCCCCEEEeCCHHHHHHHHHHHHh---
Confidence 99999999999999999999999999987664 1334678999999999999999999999999999999998874
Q ss_pred CCCCCCcEEEEeccCCcEEEEEEEEeCCe---eEEecccccc--cc----ccCCCCCCCCCCceEEecCCCCCHHHHHHH
Q 010065 260 FGSAGCRVIIEEFLEGEEASFFALVDGEN---AIPLESAQDH--KR----VGDGDTGPNTGGMGAYSPAPVLTKELQSVV 330 (519)
Q Consensus 260 ~~~~~~~~lvEe~I~G~E~sv~~l~dg~~---~~~~~~~~~~--~~----~~~~~~~~~~g~~~~~~P~~~l~~~~~~~i 330 (519)
.+..+|||+||+|+|++|.++.++.. +.+....... .. +++++.+|..+...+++|++ ++++..+++
T Consensus 223 ---~~~~vlVEe~I~G~E~~v~vl~~~~~~~~~~~~~ei~~~~~~~~~~~~~d~~~ky~~~~~~~~~Pa~-l~~~~~~~i 298 (373)
T 3lwb_A 223 ---HDPKVIVEAAISGRELECGVLEMPDGTLEASTLGEIRVAGVRGREDSFYDFATKYLDDAAELDVPAK-VDDQVAEAI 298 (373)
T ss_dssp ---TCSSEEEEECCEEEEEEEEEEECTTSCEEECCCEEEECCSTTCSEESSSCHHHHHTCTTCEEESSCC-CCHHHHHHH
T ss_pred ---cCCCEEEeCCCCCeEEEEEEEECCCCceEEeeeeEEEccCCCCccccccchhhcccCCCceEEeCCC-CCHHHHHHH
Confidence 56899999999999999999986542 2222222222 23 78888888888888889999 999999999
Q ss_pred HHHHHHHHHHHHHHcCCCeeeEEEEEEEEEcCCCceEEEEEeCCCCCCchHHHHHH----hCCCHHHHHHHHHh
Q 010065 331 MESIILPTVKGMSAEGCKFVGVLYAGLMIEKKSGLPKLIEYNVRFGDPECQVLMVR----LESDLAEVLLAACR 400 (519)
Q Consensus 331 ~~~a~~~~~~~~~a~g~~~~G~~~vdf~~~~~g~~~~viEiN~R~G~~~~~~~~~~----~G~d~~~~~i~~~~ 400 (519)
++.+ .++++++|+. |++|+||+++++| + ||+|||||||++.. +++|. +|+|+.+++.+++.
T Consensus 299 ~~~a----~~~~~aLg~~--G~~~vDf~~~~dg-~-~vlEIN~~PG~t~~-S~~p~~~~a~Gi~~~~li~~li~ 363 (373)
T 3lwb_A 299 RQLA----IRAFAAIDCR--GLARVDFFLTDDG-P-VINEINTMPGFTTI-SMYPRMWAASGVDYPTLLATMIE 363 (373)
T ss_dssp HHHH----HHHHHHTTCC--SEEEEEEEEETTE-E-EEEEEESSCCCSTT-SHHHHHHHHTTCCHHHHHHHHHH
T ss_pred HHHH----HHHHHHhCCc--cEEEEEEEEECCC-C-EEEEecCCCCCCcc-cHHHHHHHHhCCCHHHHHHHHHH
Confidence 8877 4688999987 9999999999988 6 99999999999876 55543 49999888766654
No 16
>3se7_A VANA; alpha-beta structure, D-alanine-D-lactate ligase, ligase; HET: ATP; 3.07A {}
Probab=100.00 E-value=1.2e-45 Score=375.70 Aligned_cols=307 Identities=19% Similarity=0.160 Sum_probs=233.1
Q ss_pred cceeEEEeeccCCCCCcccccCCCCCCCccEEEEEeCChhHHHHHHHHHhcCCCcEEEEecCCCCCcCCCC--Ccccc--
Q 010065 54 SSFFSTVKCLAQKSQPSVSVNAPTNAGQRVVVLVIGGGGREHALCYALKRSHSCDAVFCAPGNAGISNSGD--ATCIP-- 129 (519)
Q Consensus 54 ~~~~i~v~~GG~s~e~~vS~~s~~~~~~~~~vliiG~g~~~~~l~~~l~~~~g~~~v~~~~~~~~~~~~~~--~~~v~-- 129 (519)
++|||+|||||.|+||+||+.||.+ ++.+|.+. |++++.++.+..+.+.... ...+.
T Consensus 2 ~~~~v~vl~GG~s~e~~vSl~sa~~------------------v~~al~~~-g~~v~~i~~~~~~~~~~~~~~~~~~~~~ 62 (346)
T 3se7_A 2 SHMKIGIIFGGVSEEHDISVKSARE------------------VATHLGTG-VFEPFYLGITKSGAWQLCDGPGENWEDG 62 (346)
T ss_dssp CCEEEEEEEECSSTTHHHHHHHHHH------------------HHHHSCTT-TEEEEEEEECTTSCEEEESCSSSSSSSS
T ss_pred CCCEEEEEeeecCCCccHHHHHHHH------------------HHHHhccc-CCEEEEEEECCCCCEEeccchhhhhccc
Confidence 5899999999999999999999876 67777665 8998888766444332110 00000
Q ss_pred -------CCCCCCHHHHHH----HHHHcCCcEEEE-----CCChhhHHHHHHHHHHCCCCeeCCcHHHHHHhcCHHHHHH
Q 010065 130 -------DLDVLDGDAVIS----FCRKWSVGLVVV-----GPEAPLVSGLANKLVKAGIPTFGPSSEAAALEGSKNFMKN 193 (519)
Q Consensus 130 -------~~d~~d~~~l~~----~~~~~~id~Vi~-----g~E~~~~~~~a~~le~~gip~~g~~~~~~~~~~dK~~~k~ 193 (519)
..+..+. .+.. ..++.++|+||| .+|++.++++ |+.+|+||+|+++.++.+++||..+++
T Consensus 63 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~D~v~~~lhG~~gedg~iq~~---le~~gip~~g~~~~a~~~~~dK~~~k~ 138 (346)
T 3se7_A 63 NCRPAVLSPDRSVH-GLLVLEQGKYETIRLDLVLPVLHGKLGEDGAIQGL---LELSGIPYVGCDIQSSALCMDKSLTYL 138 (346)
T ss_dssp CCEEEEECCCTTTC-EEEEEETTEEEEEECSEEEECCCSTTTTSSHHHHH---HHHHCCCBSSCCHHHHHHHHSHHHHHH
T ss_pred ccccceeccCccCc-cceecccccccccCCCEEEEccCCCCCCChHHHHH---HHHcCCCeeCcCHHHHHHHhCHHHHHH
Confidence 0000000 0000 012457999999 2688876655 999999999999999999999999999
Q ss_pred HHHHcCCCCCCeeecCCHHHHHHHHHHhCCCEEEEeCCCCCCCcEEEeCCHHHHHHHHHHHHhhccCCCCCCcEEEEecc
Q 010065 194 LCDKYGIPTAKYKTFTDPNAAKQYIQEEGAPIVVKADGLAAGKGVIVAMTLEEAYEAVDSMLLKNAFGSAGCRVIIEEFL 273 (519)
Q Consensus 194 ~l~~~Gi~~p~~~~v~~~~~~~~~~~~~g~P~VvKP~~g~gs~GV~~v~~~~el~~a~~~~~~~~~~~~~~~~~lvEe~I 273 (519)
+++++|||+|++..+.+.+ ..+.+.++||+||||..+++|.||.++++.+|+.++++.++. .+..+|||+||
T Consensus 139 ~l~~~Gip~p~~~~~~~~~--~~~~~~lg~PvvvKP~~~~~s~Gv~~v~~~~el~~a~~~~~~------~~~~vlvEe~I 210 (346)
T 3se7_A 139 VARSAGIATPNFWTVTADE--KIPTDQLTYPVFVKPARSGSSFGVSKVAREEDLQGAVEAARE------YDSKVLIEEAV 210 (346)
T ss_dssp HHHHTTCBCCCEEEEETTS--CCCTTTCCSSEEEEESSCCTTTTCEEECSHHHHHHHHHHHTT------TCSEEEEEECC
T ss_pred HHHHcCcCcCCEEEEcCcH--HHHHHhcCCCEEEEeCCCCCCcCEEEECCHHHHHHHHHHHHh------CCCcEEEEeCc
Confidence 9999999999999988765 334467899999999999999999999999999999998863 46789999999
Q ss_pred CCcEEEEEEEEeCCeeEEec--cccccccccCC----CCCCCCCCceEEecCCCCCHHHHHHHHHHHHHHHHHHHHHcCC
Q 010065 274 EGEEASFFALVDGENAIPLE--SAQDHKRVGDG----DTGPNTGGMGAYSPAPVLTKELQSVVMESIILPTVKGMSAEGC 347 (519)
Q Consensus 274 ~G~E~sv~~l~dg~~~~~~~--~~~~~~~~~~~----~~~~~~g~~~~~~P~~~l~~~~~~~i~~~a~~~~~~~~~a~g~ 347 (519)
+|+|++|.++.+++....++ .......++++ +.+|..+.....+|++ ++++..+++++.+ .++++++|+
T Consensus 211 ~G~E~~v~vl~~~~~~~~~~~~e~~~~~~~~d~~q~~~~ky~~~~~~~~~pa~-l~~~~~~~i~~~a----~~~~~~lg~ 285 (346)
T 3se7_A 211 IGTEIGCAVMGNGPELITGEVDQITLSHGFFKIHQESTPESGSDNSAVTVPAD-ISTTSRSLVQDTA----KAVYRALGC 285 (346)
T ss_dssp CSEEEEEEEEEETTEEEECCCEEECCC--------------CGGGSCEESSCC-CCHHHHHHHHHHH----HHHHHHHTC
T ss_pred CCEEEEEEEEecCCCeEEEeeEEEecCCCCcCcccchhccccCCCeeEEeCCC-CCHHHHHHHHHHH----HHHHHHhCC
Confidence 99999999998765333222 23334468888 8889888888889998 9999988888877 468889998
Q ss_pred CeeeEEEEEEEEEcCCCceEEEEEeCCCCCCchHHHHH----HhCCCHHHHHHHHHh
Q 010065 348 KFVGVLYAGLMIEKKSGLPKLIEYNVRFGDPECQVLMV----RLESDLAEVLLAACR 400 (519)
Q Consensus 348 ~~~G~~~vdf~~~~~g~~~~viEiN~R~G~~~~~~~~~----~~G~d~~~~~i~~~~ 400 (519)
. |++++||+++++| ++|++|||+|||++.. ++++ .+|+|+.+++.+++.
T Consensus 286 ~--G~~~vD~~~~~~g-~~~vlEiN~rPG~t~~-s~~p~~~~~~G~~~~~l~~~li~ 338 (346)
T 3se7_A 286 R--GLSRVDLFLTEDG-KVVLNEVNTFPGMTSY-SRYPRMMTAAGLSRADVIDRLVS 338 (346)
T ss_dssp C--EEEEEEEEECTTS-CEEEEEEESSCCCSTT-CHHHHHHHHTTCCHHHHHHHHHH
T ss_pred c--eEEEEEEEEeCCC-CEEEEEEeCCCCCCcc-cHHHHHHHHhCCCHHHHHHHHHH
Confidence 8 9999999999886 8999999999999776 4444 349999998877754
No 17
>4dim_A Phosphoribosylglycinamide synthetase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, ligase; 2.61A {Anaerococcus prevotii}
Probab=100.00 E-value=2.7e-42 Score=358.53 Aligned_cols=387 Identities=18% Similarity=0.192 Sum_probs=278.5
Q ss_pred CCCccEEEEEeCChhHHHHHHHHHhcCCCcEEEEecCCCC-C-cCCCCCccccCCCCCCHHHHHHHHHHcCCcEEEECCC
Q 010065 79 AGQRVVVLVIGGGGREHALCYALKRSHSCDAVFCAPGNAG-I-SNSGDATCIPDLDVLDGDAVISFCRKWSVGLVVVGPE 156 (519)
Q Consensus 79 ~~~~~~vliiG~g~~~~~l~~~l~~~~g~~~v~~~~~~~~-~-~~~~~~~~v~~~d~~d~~~l~~~~~~~~id~Vi~g~E 156 (519)
+..+++|||+|+|..+..+++++++. |+++++++..+.. . ...++ ..+ .++..|.+.++++++++++|+|+++++
T Consensus 4 m~~~~~ilI~g~g~~~~~~~~a~~~~-G~~~v~v~~~~~~~~~~~~ad-~~~-~~~~~d~~~l~~~~~~~~~d~v~~~~~ 80 (403)
T 4dim_A 4 MYDNKRLLILGAGRGQLGLYKAAKEL-GIHTIAGTMPNAHKPCLNLAD-EIS-YMDISNPDEVEQKVKDLNLDGAATCCL 80 (403)
T ss_dssp --CCCEEEEECCCGGGHHHHHHHHHH-TCEEEEEECSSCCHHHHHHCS-EEE-ECCTTCHHHHHHHTTTSCCSEEECCSC
T ss_pred ccCCCEEEEECCcHhHHHHHHHHHHC-CCEEEEEcCCCCCCcchhhCC-eEE-EecCCCHHHHHHHHHHcCCCEEEeCCc
Confidence 34568999999998778889999887 9999988642211 1 11111 222 467788999999999999999999654
Q ss_pred hhhHHHHHHHHHHCCCCeeCCcHHHHHHhcCHHHHHHHHHHcCCCCCCeeecCCHHHHHHHHHHhCCCEEEEeCCCCCCC
Q 010065 157 APLVSGLANKLVKAGIPTFGPSSEAAALEGSKNFMKNLCDKYGIPTAKYKTFTDPNAAKQYIQEEGAPIVVKADGLAAGK 236 (519)
Q Consensus 157 ~~~~~~~a~~le~~gip~~g~~~~~~~~~~dK~~~k~~l~~~Gi~~p~~~~v~~~~~~~~~~~~~g~P~VvKP~~g~gs~ 236 (519)
+..+..+++.++.+|+| |++++++.+++||..++++++++|||+|++..+.+.+++.+++++++||+|+||..++||+
T Consensus 81 ~~~~~~~a~~~~~~gl~--g~~~~~~~~~~dK~~~~~~l~~~gip~p~~~~~~~~~~~~~~~~~~g~P~vvKp~~g~gg~ 158 (403)
T 4dim_A 81 DTGIVSLARICDKENLV--GLNEEAAIMCGDKYKMKEAFKKYNVNTARHFVVRNENELKNALENLKLPVIVKATDLQGSK 158 (403)
T ss_dssp STTHHHHHHHHHHHTCS--SCCHHHHHHHHCHHHHHHHHHHHTCCCCCEECCCSHHHHHHHHHTSCSSEEEECSCC----
T ss_pred chhHHHHHHHHHHcCcC--CCCHHHHHHHhCHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHhcCCCCEEEEECCCCCCC
Confidence 44445678888999997 8999999999999999999999999999999999999999999999999999999999999
Q ss_pred cEEEeCCHHHHHHHHHHHHhhccCCCCCCcEEEEeccCCcEEEEEEEEeCCeeEEeccccccccccCCCCCCCCCCceEE
Q 010065 237 GVIVAMTLEEAYEAVDSMLLKNAFGSAGCRVIIEEFLEGEEASFFALVDGENAIPLESAQDHKRVGDGDTGPNTGGMGAY 316 (519)
Q Consensus 237 GV~~v~~~~el~~a~~~~~~~~~~~~~~~~~lvEe~I~G~E~sv~~l~dg~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 316 (519)
||+++++.+|+.++++.+... ..++.++|||||+|+|++++++..++.+..+...... .+.. ......++.
T Consensus 159 Gv~~v~~~~el~~~~~~~~~~----~~~~~~lvEe~i~g~e~sv~~~~~~g~~~~~~~~~~~--~~~~---~~~~~~~~~ 229 (403)
T 4dim_A 159 GIYIAKKEEEAIDGFNETMNL----TKRDYCIVEEFIEGYEFGAQAFVYKNDVLFVMPHGDE--TYMS---HTAVPVGHY 229 (403)
T ss_dssp -CEEESSHHHHHHHHHHHHHH----CSSSCCEEEECCCSEEEEEEEEEETTEEEEEEEEEEE--EEES---SSEEEEEEE
T ss_pred CEEEECCHHHHHHHHHHHHhc----CcCCcEEEEEccCCcEEEEEEEEECCEEEEEEEecce--eccC---CCCcceeEE
Confidence 999999999999999988754 2347899999999999999999744434433322211 1111 113345778
Q ss_pred ecCCCCCHHHHHHHHHHHHHHHHHHHHHcCCCeeeEEEEEEEEEcCCCceEEEEEeCCCCCCchHHH-HHHhCCCHHHHH
Q 010065 317 SPAPVLTKELQSVVMESIILPTVKGMSAEGCKFVGVLYAGLMIEKKSGLPKLIEYNVRFGDPECQVL-MVRLESDLAEVL 395 (519)
Q Consensus 317 ~P~~~l~~~~~~~i~~~a~~~~~~~~~a~g~~~~G~~~vdf~~~~~g~~~~viEiN~R~G~~~~~~~-~~~~G~d~~~~~ 395 (519)
.|+. ++++..+++.+.+ .+++.++|+.. |++|+||+++++ ++||+|+|||+|++.++.+ ...+|+|+.+++
T Consensus 230 ~p~~-l~~~~~~~l~~~a----~~~~~~lg~~g-g~~~ve~~~~~~--~~~~iEiN~R~~~~~~~~~~~~~~G~d~~~~~ 301 (403)
T 4dim_A 230 VPLD-VKDDIIEKTKTEV----KKAIKALGLNN-CAVNVDMILKDN--EVYIIELTGRVGANCLPELVEINYGIEYYKMI 301 (403)
T ss_dssp ESCC-SCHHHHHHHHHHH----HHHHHHHTCCS-EEEEEEEEEETT--EEEEEEEESSCCSTTHHHHHHHHHTSCHHHHH
T ss_pred eCCC-CCHHHHHHHHHHH----HHHHHHcCCCC-CcEEEEEEEECC--cEEEEEEcCCCCCCcHHHHHHHHhCcCHHHHH
Confidence 8988 8999888888876 46788999872 499999999854 5999999999998765433 345699999999
Q ss_pred HHHHhCCCC-CCCc-c-cCCCcE-EEEEEecCCCCCCCCCCcccccchhhhccCCCeEEEEeeeeecCCCcE----EecC
Q 010065 396 LAACRGELT-GVTL-N-WSPGSA-MVVVMASKGYPGSYEKGSEIQNLEEAEQVAPSVKIFHAGTALDADGNF----IATG 467 (519)
Q Consensus 396 i~~~~g~~~-~~~~-~-~~~~~a-~~~~l~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~g~~----~~~~ 467 (519)
+++++|... +... . ..+++. .++.+..+ .++.. ..+.+.+. ..+.+..+.... ..|.. .++.
T Consensus 302 ~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~-~~G~i---~~~~~~~~---~~~~v~~~~~~~---~~G~~v~~~~d~~ 371 (403)
T 4dim_A 302 ASMAISENPLVFWSQKSKENKAGLARMIIETE-KSGIL---KEILNSNA---KDDDIVEITFFK---EENDEIKKFENSN 371 (403)
T ss_dssp HHHHTTCCTHHHHTTCCSSCCEEEEEEECCSS-CCEEE---EEEEECCC---CCTTEEEEEECC---CTTCEECCSCSGG
T ss_pred HHHHcCCCccccccccccccccceEEEEEecC-CCeEE---Eeeecccc---cCCCeEEEEEEc---CCCCEeCCCCCCC
Confidence 999999843 1111 1 122322 22222222 12221 12332221 122332221111 23332 3456
Q ss_pred CeEEEEEEecCCHHHHHHHHHHHhhccccC
Q 010065 468 GRVLGVTAKGKDVEEAQDRAYLAVEEINWP 497 (519)
Q Consensus 468 ~rvg~vi~~g~t~~ea~~~a~~~~~~i~~~ 497 (519)
+|+|+|++.|+|.++|.++++++++.++++
T Consensus 372 ~~~g~vi~~~~~~~~a~~~~~~~~~~~~i~ 401 (403)
T 4dim_A 372 DCIGQIIVKEETLDKCKDKLDVIINNINII 401 (403)
T ss_dssp GCCEEEEEEESSHHHHHHHHHHHHTTEEEE
T ss_pred ceeEEEEEEeCCHHHHHHHHHHHhccEEEE
Confidence 799999999999999999999999998763
No 18
>1kjq_A GART 2, phosphoribosylglycinamide formyltransferase 2, 5'-; ATP-grAsp, purine biosynthesis, nucleotide; HET: ADP MPO; 1.05A {Escherichia coli} SCOP: b.84.2.1 c.30.1.1 d.142.1.2 PDB: 1kj9_A* 1kji_A* 1kjj_A* 1kj8_A* 1eyz_A* 1ez1_A*
Probab=100.00 E-value=1.4e-41 Score=351.70 Aligned_cols=378 Identities=17% Similarity=0.181 Sum_probs=281.2
Q ss_pred CccEEEEEeCChhHHHHHHHHHhcCCCcEEEEecCCCCC-cCCCCCccccCCCCCCHHHHHHHHHHcCCcEEEECCChhh
Q 010065 81 QRVVVLVIGGGGREHALCYALKRSHSCDAVFCAPGNAGI-SNSGDATCIPDLDVLDGDAVISFCRKWSVGLVVVGPEAPL 159 (519)
Q Consensus 81 ~~~~vliiG~g~~~~~l~~~l~~~~g~~~v~~~~~~~~~-~~~~~~~~v~~~d~~d~~~l~~~~~~~~id~Vi~g~E~~~ 159 (519)
.+++|||+|+|.....+++++++. |++++.+++..... ....+ ..+ ..+..|.+.++++++++++|+|+++.|+..
T Consensus 10 ~~~~ili~g~g~~~~~~~~a~~~~-G~~v~~~~~~~~~~~~~~~d-~~~-~~~~~d~~~l~~~~~~~~~d~v~~~~e~~~ 86 (391)
T 1kjq_A 10 AATRVMLLGSGELGKEVAIECQRL-GVEVIAVDRYADAPAMHVAH-RSH-VINMLDGDALRRVVELEKPHYIVPEIEAIA 86 (391)
T ss_dssp TCCEEEEESCSHHHHHHHHHHHTT-TCEEEEEESSTTCGGGGGSS-EEE-ECCTTCHHHHHHHHHHHCCSEEEECSSCSC
T ss_pred CCCEEEEECCCHHHHHHHHHHHHc-CCEEEEEECCCCCchhhhcc-ceE-ECCCCCHHHHHHHHHHcCCCEEEECCCcCC
Confidence 458999999985555677787765 99988887542111 11111 222 456778999999999999999999988766
Q ss_pred HHHHHHHHHHCCCCeeCCcHHHHHHhcCHHHHHHHH-HHcCCCCCCeeecCCHHHHHHHHHHhCCCEEEEeCCCCCCCcE
Q 010065 160 VSGLANKLVKAGIPTFGPSSEAAALEGSKNFMKNLC-DKYGIPTAKYKTFTDPNAAKQYIQEEGAPIVVKADGLAAGKGV 238 (519)
Q Consensus 160 ~~~~a~~le~~gip~~g~~~~~~~~~~dK~~~k~~l-~~~Gi~~p~~~~v~~~~~~~~~~~~~g~P~VvKP~~g~gs~GV 238 (519)
.+ +++.++.+|++ +|++++++.+++||..+++++ +++|||+|++..+.+.+++.+++++++||+|+||..+++|+||
T Consensus 87 ~~-~~~~l~~~gi~-~~~~~~~~~~~~dK~~~~~~l~~~~gip~p~~~~~~~~~~~~~~~~~~g~P~vvKp~~g~gg~Gv 164 (391)
T 1kjq_A 87 TD-MLIQLEEEGLN-VVPCARATKLTMNREGIRRLAAEELQLPTSTYRFADSESLFREAVADIGYPCIVKPVMSSSGKGQ 164 (391)
T ss_dssp HH-HHHHHHHTTCE-ESSCHHHHHHHHSHHHHHHHHHTTSCCCBCCEEEESSHHHHHHHHHHHCSSEEEEESCC---CCC
T ss_pred HH-HHHHHHhCCCC-cCCCHHHHHHhhCHHHHHHHHHHhCCCCCCCeeeeCCHHHHHHHHHhcCCCEEEEeCCCCCCCCe
Confidence 53 56778999994 589999999999999999999 8999999999999999999999999999999999999999999
Q ss_pred EEeCCHHHHHHHHHHHHhhccCCCCCCcEEEEeccC-CcEEEEEEEEeCCeeEEeccccccccccCCCCCCCCCCceEEe
Q 010065 239 IVAMTLEEAYEAVDSMLLKNAFGSAGCRVIIEEFLE-GEEASFFALVDGENAIPLESAQDHKRVGDGDTGPNTGGMGAYS 317 (519)
Q Consensus 239 ~~v~~~~el~~a~~~~~~~~~~~~~~~~~lvEe~I~-G~E~sv~~l~dg~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 317 (519)
.++++.+|+.++++.+.... ++ .+..++|||||+ |.|+++.++++++....+.........+++ ...+.
T Consensus 165 ~~v~~~~el~~~~~~~~~~~-~~-~~~~~lvEe~i~~g~E~sv~~~~~~~g~~~~~~~~~~~~~~~~--------~~~~~ 234 (391)
T 1kjq_A 165 TFIRSAEQLAQAWKYAQQGG-RA-GAGRVIVEGVVKFDFEITLLTVSAVDGVHFCAPVGHRQEDGDY--------RESWQ 234 (391)
T ss_dssp EEECSGGGHHHHHHHHHHHS-GG-GCCCEEEEECCCCSEEEEEEEEEETTEEEECCCEEEEEETTEE--------EEEEE
T ss_pred EEECCHHHHHHHHHHHHhhc-cc-CCCCEEEEEecCCCeEEEEEEEEeCCCeEEccCcceEEECCEE--------EEEEe
Confidence 99999999999998876421 00 246899999999 799999999875543322221111111221 13466
Q ss_pred cCCCCCHHHHHHHHHHHHHHHHHHHHHcCCCeeeEEEEEEEEEcCCCceEEEEEeCCCCCCchHHHHHHhCCCHHHHHHH
Q 010065 318 PAPVLTKELQSVVMESIILPTVKGMSAEGCKFVGVLYAGLMIEKKSGLPKLIEYNVRFGDPECQVLMVRLESDLAEVLLA 397 (519)
Q Consensus 318 P~~~l~~~~~~~i~~~a~~~~~~~~~a~g~~~~G~~~vdf~~~~~g~~~~viEiN~R~G~~~~~~~~~~~G~d~~~~~i~ 397 (519)
|++ ++++..+++.+.+ .+++.++|+. |++++||++++++ +|++|+|||+|++.++.+.. .|+|+++++++
T Consensus 235 p~~-l~~~~~~~~~~~a----~~~~~~lg~~--G~~~ve~~~~~~~--~~viEiN~R~~~~~~~~~~~-~g~~~~~~~~~ 304 (391)
T 1kjq_A 235 PQQ-MSPLALERAQEIA----RKVVLALGGY--GLFGVELFVCGDE--VIFSEVSPRPHDTGMVTLIS-QDLSEFALHVR 304 (391)
T ss_dssp CCC-CCHHHHHHHHHHH----HHHHHHHCSS--EEEEEEEEEETTE--EEEEEEESSCCGGGGGHHHH-BSSCHHHHHHH
T ss_pred CCC-CCHHHHHHHHHHH----HHHHHHcCCe--eEEEEEEEEeCCc--EEEEEEECCCCCCcceeeee-cCcCHHHHHHH
Confidence 888 8988888887766 4677888865 9999999999875 99999999999887755553 49999999999
Q ss_pred HHhCCCCCCCcccCCCcEEEEEEecCCCCCCCCCCcccccchhhhccCCCeEEEEeeeeecCCCcEEecCCeEEEEEEec
Q 010065 398 ACRGELTGVTLNWSPGSAMVVVMASKGYPGSYEKGSEIQNLEEAEQVAPSVKIFHAGTALDADGNFIATGGRVLGVTAKG 477 (519)
Q Consensus 398 ~~~g~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~rvg~vi~~g 477 (519)
+++|.+.. .+.+...+++.++++.. |+ .+..+.+++++.. ++..+...+. .+ .+.+.++|+|++.|
T Consensus 305 ~~~G~~~~-~~~~~~~~~~~~~~~~~--~~---~~~~~~~~~~~~~--pg~~v~~~~~----~~--~~~~~~lg~v~~~g 370 (391)
T 1kjq_A 305 AFLGLPVG-GIRQYGPAASAVILPQL--TS---QNVTFDNVQNAVG--ADLQIRLFGK----PE--IDGSRRLGVALATA 370 (391)
T ss_dssp HHTTCCCC-CCCBCSSEEEEEECCEE--EE---SSCEEECGGGSCB--TTEEEEECCC----CC--EEEECCCEEEEEEC
T ss_pred HHcCCCCC-CccccCcEEEEEEEccC--cc---cccccccHHHHhC--CCCEEEEecc----CC--CCCCCeEEEEEEec
Confidence 99998543 23344334455554432 22 2234556665543 4554443322 12 34567899999999
Q ss_pred CCHHHHHHHHHHHhhccccC
Q 010065 478 KDVEEAQDRAYLAVEEINWP 497 (519)
Q Consensus 478 ~t~~ea~~~a~~~~~~i~~~ 497 (519)
+|.++|+++++++++.|+++
T Consensus 371 ~~~~~a~~~~~~~~~~i~~~ 390 (391)
T 1kjq_A 371 ESVVDAIERAKHAAGQVKVQ 390 (391)
T ss_dssp SSHHHHHHHHHHHHHHCEEE
T ss_pred CCHHHHHHHHHHHHhhheec
Confidence 99999999999999999875
No 19
>4eg0_A D-alanine--D-alanine ligase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.65A {Burkholderia ambifaria} PDB: 4egq_A 4egj_A
Probab=100.00 E-value=1.4e-43 Score=356.30 Aligned_cols=289 Identities=17% Similarity=0.131 Sum_probs=223.8
Q ss_pred cceeEEEeeccCCCCCcccccCCCCCCCccEEEEEeCChhHHHHHHHHHhcCCCcEEEEecCCCCCcCCCCCccccCCCC
Q 010065 54 SSFFSTVKCLAQKSQPSVSVNAPTNAGQRVVVLVIGGGGREHALCYALKRSHSCDAVFCAPGNAGISNSGDATCIPDLDV 133 (519)
Q Consensus 54 ~~~~i~v~~GG~s~e~~vS~~s~~~~~~~~~vliiG~g~~~~~l~~~l~~~~g~~~v~~~~~~~~~~~~~~~~~v~~~d~ 133 (519)
.++||+||+||.|+||+||+.|+.. ++.+|++. |++++.+++.+. ..
T Consensus 12 ~~~~v~vl~gg~s~E~~vsl~s~~~------------------v~~al~~~-g~~v~~i~~~~~---------~~----- 58 (317)
T 4eg0_A 12 RFGKVAVLFGGESAEREVSLTSGRL------------------VLQGLRDA-GIDAHPFDPAER---------PL----- 58 (317)
T ss_dssp GGCEEEEECCCSSTTHHHHHHHHHH------------------HHHHHHHT-TCEEEEECTTTS---------CT-----
T ss_pred hcceEEEEECCCCCcceeeHHHHHH------------------HHHHHHHC-CCEEEEEeCCCc---------hH-----
Confidence 4689999999999999999999865 78888877 999988853211 00
Q ss_pred CCHHHHHHHHHHcCCcEEEEC-----CChhhHHHHHHHHHHCCCCeeCCcHHHHHHhcCHHHHHHHHHHcCCCCCCeeec
Q 010065 134 LDGDAVISFCRKWSVGLVVVG-----PEAPLVSGLANKLVKAGIPTFGPSSEAAALEGSKNFMKNLCDKYGIPTAKYKTF 208 (519)
Q Consensus 134 ~d~~~l~~~~~~~~id~Vi~g-----~E~~~~~~~a~~le~~gip~~g~~~~~~~~~~dK~~~k~~l~~~Gi~~p~~~~v 208 (519)
. ..++.++|+||+. +|++.+++ .++.+|+|++|++++++.+++||..++++|+++|||+|++..+
T Consensus 59 ---~----~l~~~~~D~v~~~~hg~~ge~~~~~~---~le~~gip~~g~~~~~~~~~~dK~~~k~~l~~~Gip~p~~~~~ 128 (317)
T 4eg0_A 59 ---S----ALKDEGFVRAFNALHGGYGENGQIQG---ALDFYGIRYTGSGVLGSALGLDKFRTKLVWQQTGVPTPPFETV 128 (317)
T ss_dssp ---T----HHHHTTCCEEEECCCSGGGTSSHHHH---HHHHHTCEESSCCHHHHHHHHCHHHHHHHHHHTTCCCCCEEEE
T ss_pred ---H----HhhhcCCCEEEEcCCCCCCchHHHHH---HHHHcCCCeeCcCHHHHHHHhCHHHHHHHHHHCCcCCCCEEEE
Confidence 1 1245689999992 57776555 4999999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHH----HHhCCCEEEEeCCCCCCCcEEEeCCHHHHHHHHHHHHhhccCCCCCCcEEEEeccC-CcEEEEEEE
Q 010065 209 TDPNAAKQYI----QEEGAPIVVKADGLAAGKGVIVAMTLEEAYEAVDSMLLKNAFGSAGCRVIIEEFLE-GEEASFFAL 283 (519)
Q Consensus 209 ~~~~~~~~~~----~~~g~P~VvKP~~g~gs~GV~~v~~~~el~~a~~~~~~~~~~~~~~~~~lvEe~I~-G~E~sv~~l 283 (519)
.+.+++.+++ +.++||+||||..+++|.||.++++.+|+.++++.++. .+..+||||||+ |+|++|.++
T Consensus 129 ~~~~~~~~~~~~~~~~~g~PvvvKP~~~~~s~Gv~~v~~~~el~~a~~~~~~------~~~~~lvEe~i~~G~E~~v~vl 202 (317)
T 4eg0_A 129 MRGDDYAARATDIVAKLGLPLFVKPASEGSSVAVLKVKTADALPAALSEAAT------HDKIVIVEKSIEGGGEYTACIA 202 (317)
T ss_dssp ETTSCHHHHHHHHHHHHCSCEEEEECC-----CCEEECSGGGHHHHHHHHTT------TCSEEEEEECCCSSEEEEEEEE
T ss_pred ECchhHHHHHHHHHHhcCCCEEEEeCCCCCCCCEEEECCHHHHHHHHHHHHh------CCCeEEEEcCCCCCcEEEEEEE
Confidence 8887776666 78999999999999999999999999999999988753 467899999999 999999988
Q ss_pred EeCCeeEEeccccccccccCCCCCCCCCCceEEecCCCCCHHHHHHHHHHHHHHHHHHHHHcCCCeeeEEEEEEEEEcCC
Q 010065 284 VDGENAIPLESAQDHKRVGDGDTGPNTGGMGAYSPAPVLTKELQSVVMESIILPTVKGMSAEGCKFVGVLYAGLMIEKKS 363 (519)
Q Consensus 284 ~dg~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~P~~~l~~~~~~~i~~~a~~~~~~~~~a~g~~~~G~~~vdf~~~~~g 363 (519)
.+. ..+.........+++++.++..++....+|+. ++++..+++++.+ .++++++|++ |++++||+++++|
T Consensus 203 ~~~--~~~~~~i~~~~~~~~~~~k~~~g~~~~~~P~~-l~~~~~~~l~~~a----~~~~~~lg~~--G~~~vD~~~~~~g 273 (317)
T 4eg0_A 203 GDL--DLPLIKIVPAGEFYDYHAKYVANDTQYLIPCG-LPAEQETELKRIA----RRAFDVLGCT--DWGRADFMLDAAG 273 (317)
T ss_dssp TTC--CCCCEEEEC---------------CEEESSCS-SCHHHHHHHHHHH----HHHHHTTTCC--SEEEEEEEECTTC
T ss_pred CCc--ccceEEEeeCCceechhhcccCCCeeEEcCCC-CCHHHHHHHHHHH----HHHHHHhCCC--ceEEEEEEEeCCC
Confidence 542 22222223334578888888888888899998 9999888888877 4688899987 9999999999876
Q ss_pred CceEEEEEeCCCCCCchHHHHHH----hCCCHHHHHHHHHhCC
Q 010065 364 GLPKLIEYNVRFGDPECQVLMVR----LESDLAEVLLAACRGE 402 (519)
Q Consensus 364 ~~~~viEiN~R~G~~~~~~~~~~----~G~d~~~~~i~~~~g~ 402 (519)
++||+|||||||++.. ++++. .|+++.+++.+++...
T Consensus 274 -~~~vlEiN~~pg~t~~-s~~p~~~~~~G~~~~~l~~~li~~a 314 (317)
T 4eg0_A 274 -NAYFLEVNTAPGMTDH-SLPPKAARSIGIGYSELVVKVLSLT 314 (317)
T ss_dssp -CEEEEEEESSCCCSTT-SHHHHHHHHTTCCHHHHHHHHHHTT
T ss_pred -CEEEEEeeCCCCCCcc-cHHHHHHHHcCCCHHHHHHHHHHHH
Confidence 8999999999999876 55554 3999999999887654
No 20
>1ehi_A LMDDL2, D-alanine:D-lactate ligase; ATP-binding. grAsp motif for ATP.; HET: ADP PHY; 2.38A {Leuconostoc mesenteroides} SCOP: c.30.1.2 d.142.1.1
Probab=100.00 E-value=3e-43 Score=361.90 Aligned_cols=304 Identities=17% Similarity=0.149 Sum_probs=238.0
Q ss_pred ceeEEEeeccCCCCCcccccCCCCCCCccEEEEEeCChhHHHHHHHH-HhcCCCcEEEEecCCCCCcCCC----------
Q 010065 55 SFFSTVKCLAQKSQPSVSVNAPTNAGQRVVVLVIGGGGREHALCYAL-KRSHSCDAVFCAPGNAGISNSG---------- 123 (519)
Q Consensus 55 ~~~i~v~~GG~s~e~~vS~~s~~~~~~~~~vliiG~g~~~~~l~~~l-~~~~g~~~v~~~~~~~~~~~~~---------- 123 (519)
+|||+||+||.|+||+||+.||.+ +..+| .+. |++++.++.+..+.+...
T Consensus 3 k~~v~vl~gG~s~E~~vSl~s~~~------------------v~~al~~~~-g~~v~~i~~~~~~~~~~~~~~~~~~~~~ 63 (377)
T 1ehi_A 3 KKRVALIFGGNSSEHDVSKRSAQN------------------FYNAIEATG-KYEIIVFAIAQNGFFLDTESSKKILALE 63 (377)
T ss_dssp CEEEEEEEECSSTTHHHHHHHHHH------------------HHHHHHHHS-SEEEEEEEECTTSCBCCHHHHHHHHTTC
T ss_pred CcEEEEEeCCCCCCcceeHHHHHH------------------HHHHhCccc-CcEEEEEEEcCCCCEEeccccccccccc
Confidence 689999999999999999999865 68888 666 999998875533322210
Q ss_pred CCccc-----------cCCCCCCHHHHHHHHHHcCCcEEEEC-----CChhhHHHHHHHHHHCCCCeeCCcHHHHHHhcC
Q 010065 124 DATCI-----------PDLDVLDGDAVISFCRKWSVGLVVVG-----PEAPLVSGLANKLVKAGIPTFGPSSEAAALEGS 187 (519)
Q Consensus 124 ~~~~v-----------~~~d~~d~~~l~~~~~~~~id~Vi~g-----~E~~~~~~~a~~le~~gip~~g~~~~~~~~~~d 187 (519)
....+ ..+++. .+.. +..++|+|||. +|++.+++ .++.+|+|++|++++++.+++|
T Consensus 64 ~~~~~~~~~~~~~~~~~~~~~~---~~~~--~~~~~D~v~~~~~g~~gedg~~~~---lle~~gip~~G~~~~a~~~~~D 135 (377)
T 1ehi_A 64 DEQPIVDAFMKTVDASDPLARI---HALK--SAGDFDIFFPVVHGNLGEDGTLQG---LFKLLDKPYVGAPLRGHAVSFD 135 (377)
T ss_dssp CHHHHHHHHHTSCCTTCTTCTT---GGGG--TTCCCSEEEEECCSTTTSSSHHHH---HHHHTTCCBSSCCHHHHHHHHS
T ss_pred chhhhccccccccccccccCcc---hhhc--cccCCCEEEEecCCCCCcCHHHHH---HHHHcCCCEeCcCHHHHHHHcC
Confidence 00000 011111 1111 13579999992 57775544 4999999999999999999999
Q ss_pred HHHHHHHHHHcCCCCCCeeecCCHHH----HHHHHHHhCCCEEEEeCCCCCCCcEEEeCCHHHHHHHHHHHHhhccCCCC
Q 010065 188 KNFMKNLCDKYGIPTAKYKTFTDPNA----AKQYIQEEGAPIVVKADGLAAGKGVIVAMTLEEAYEAVDSMLLKNAFGSA 263 (519)
Q Consensus 188 K~~~k~~l~~~Gi~~p~~~~v~~~~~----~~~~~~~~g~P~VvKP~~g~gs~GV~~v~~~~el~~a~~~~~~~~~~~~~ 263 (519)
|..++++|+++|||+|++..+.+.++ +.++.+.++||+||||..++||.||.++++.+|+.++++.++. .
T Consensus 136 K~~~k~~l~~~Gip~p~~~~~~~~~~~~~~~~~~~~~~g~PvvVKP~~~~~s~Gv~~v~~~~el~~a~~~~~~------~ 209 (377)
T 1ehi_A 136 KALTKELLTVNGIRNTKYIVVDPESANNWSWDKIVAELGNIVFVKAANQGSSVGISRVTNAEEYTEALSDSFQ------Y 209 (377)
T ss_dssp HHHHHHHHHTTTCCCCCEEEECTTGGGGCCHHHHHHHHCSCEEEEESSCCTTTTEEEECSHHHHHHHHHHHTT------T
T ss_pred HHHHHHHHHHcCCCCCCEEEEeccccchHHHHHHHHhcCCCEEEEeCCCCCCcCEEEeCCHHHHHHHHHHHHh------c
Confidence 99999999999999999999987754 6666778999999999999999999999999999999998763 4
Q ss_pred CCcEEEEeccCC-cEEEEEEEEeCC-eeEEeccccc-----cccccCCCCCCCCC-CceEEecCCCCCHHHHHHHHHHHH
Q 010065 264 GCRVIIEEFLEG-EEASFFALVDGE-NAIPLESAQD-----HKRVGDGDTGPNTG-GMGAYSPAPVLTKELQSVVMESII 335 (519)
Q Consensus 264 ~~~~lvEe~I~G-~E~sv~~l~dg~-~~~~~~~~~~-----~~~~~~~~~~~~~g-~~~~~~P~~~l~~~~~~~i~~~a~ 335 (519)
+..+|||+||+| +|++|.++.+++ .+++...... ...++++..+|..+ ++.+++|++ ++++..+++++.+
T Consensus 210 ~~~vlvEe~I~G~~E~~v~vl~~~~~~~~~~~ei~~~~~~~~~~~~d~~~k~~~g~~~~~~~Pa~-l~~~~~~~i~~~a- 287 (377)
T 1ehi_A 210 DYKVLIEEAVNGARELEVGVIGNDQPLVSEIGAHTVPNQGSGDGWYDYNNKFVDNSAVHFQIPAQ-LSPEVTKEVKQMA- 287 (377)
T ss_dssp CSCEEEEECCCCSCEEEEEEEESSSCEEEEEEEEECTTSSSSSCCCCHHHHTTCCTTCEEESSCC-CCHHHHHHHHHHH-
T ss_pred CCcEEEEcCCCCCceEEEEEEcCCCcEEEeeEEEEecCCCCcCceeCHHhcccCCCCeeEEeCCC-CCHHHHHHHHHHH-
Confidence 578999999999 999999998664 3443333322 34577777777777 678889999 9999888888876
Q ss_pred HHHHHHHHHcCCCeeeEEEEEEEEEcCCCceEEEEEeCCCCCCchHHHH----HHhCCCHHHHHHHHHh
Q 010065 336 LPTVKGMSAEGCKFVGVLYAGLMIEKKSGLPKLIEYNVRFGDPECQVLM----VRLESDLAEVLLAACR 400 (519)
Q Consensus 336 ~~~~~~~~a~g~~~~G~~~vdf~~~~~g~~~~viEiN~R~G~~~~~~~~----~~~G~d~~~~~i~~~~ 400 (519)
.++++++|+. |++|+||+++++| ++||+|||||||++.+ +++ ..+|+|+.+++.+++.
T Consensus 288 ---~~~~~alg~~--G~~~vD~~~~~~g-~~~vlEiN~rpg~t~~-s~~p~~~~a~G~~~~~l~~~li~ 349 (377)
T 1ehi_A 288 ---LDAYKVLNLR--GEARMDFLLDENN-VPYLGEPNTLPGFTNM-SLFKRLWDYSDINNAKLVDMLID 349 (377)
T ss_dssp ---HHHHHHTTCC--EEEEEEEEECTTC-CEEEEEEESSCCCSTT-CGGGTGGGGGTCCHHHHHHHHHH
T ss_pred ---HHHHHHcCCC--cEEEEEEEEeCCC-CEEEEEEeCCCCCCcc-cHHHHHHHHhCCCHHHHHHHHHH
Confidence 4688999988 9999999999876 7999999999998876 333 3459999777665543
No 21
>1ulz_A Pyruvate carboxylase N-terminal domain; biotin carboxylase; 2.20A {Aquifex aeolicus} SCOP: b.84.2.1 c.30.1.1 d.142.1.2
Probab=100.00 E-value=5.1e-42 Score=361.58 Aligned_cols=391 Identities=19% Similarity=0.229 Sum_probs=281.4
Q ss_pred ccEEEEEeCChhHHHHHHHHHhcCCCcEEEEecC-CC-CC-cCCCCCccccCC------CCCCHHHHHHHHHHcCCcEEE
Q 010065 82 RVVVLVIGGGGREHALCYALKRSHSCDAVFCAPG-NA-GI-SNSGDATCIPDL------DVLDGDAVISFCRKWSVGLVV 152 (519)
Q Consensus 82 ~~~vliiG~g~~~~~l~~~l~~~~g~~~v~~~~~-~~-~~-~~~~~~~~v~~~------d~~d~~~l~~~~~~~~id~Vi 152 (519)
+++|||+|+|.....+++++++. |++++.++++ +. .. ...++ ..+ .+ +..|.+.+++++++.++|+|+
T Consensus 2 ~k~ilI~g~g~~~~~~~~a~~~~-G~~vv~v~~~~~~~~~~~~~ad-~~~-~~~p~~~~~~~d~~~l~~~~~~~~~d~v~ 78 (451)
T 1ulz_A 2 VNKVLVANRGEIAVRIIRACKEL-GIPTVAIYNEVESTARHVKLAD-EAY-MIGTDPLDTYLNKQRIINLALEVGADAIH 78 (451)
T ss_dssp CSSEEECCCHHHHHHHHHHHHHH-TCCEEEEECGGGTTCHHHHHSS-EEE-ECCSSTTHHHHCHHHHHHHHHHTTCCEEE
T ss_pred CceEEEECCcHHHHHHHHHHHHc-CCeEEEEechhhcccchhhhCc-EEE-EcCCCcccccCCHHHHHHHHHHcCCCEEE
Confidence 36799999987777788888876 9999988643 21 11 11111 111 12 234678999999999999999
Q ss_pred EC----CChhhHHHHHHHHHHCCCCeeCCcHHHHHHhcCHHHHHHHHHHcCCCCCCee--ecCCHHHHHHHHHHhCCCEE
Q 010065 153 VG----PEAPLVSGLANKLVKAGIPTFGPSSEAAALEGSKNFMKNLCDKYGIPTAKYK--TFTDPNAAKQYIQEEGAPIV 226 (519)
Q Consensus 153 ~g----~E~~~~~~~a~~le~~gip~~g~~~~~~~~~~dK~~~k~~l~~~Gi~~p~~~--~v~~~~~~~~~~~~~g~P~V 226 (519)
++ +|+.. +++.++.+|+|++|++++++.+++||..++++|+++|||+|++. .+++.+++.+++++++||+|
T Consensus 79 ~~~g~~~e~~~---~~~~~~~~gi~~~g~~~~~~~~~~dK~~~k~~l~~~gip~p~~~~~~~~~~~~~~~~~~~~g~Pvv 155 (451)
T 1ulz_A 79 PGYGFLAENAE---FAKMCEEAGITFIGPHWKVIELMGDKARSKEVMKKAGVPVVPGSDGVLKSLEEAKALAREIGYPVL 155 (451)
T ss_dssp CCSSTTTTCHH---HHHHHHHTTCEESSSCHHHHHHHHSHHHHHHHHHHTTCCBCCBCSSSCCCHHHHHHHHHHHCSSEE
T ss_pred ECCCccccCHH---HHHHHHHCCCeEECcCHHHHHHhcCHHHHHHHHHHcCCCCCCCcccccCCHHHHHHHHHHcCCCEE
Confidence 96 56653 46678999999999999999999999999999999999999997 78899999999999999999
Q ss_pred EEeCCCCCCCcEEEeCCHHHHHHHHHHHHhh--ccCCCCCCcEEEEeccCC-cEEEEEEEEeC-CeeEEecccccccccc
Q 010065 227 VKADGLAAGKGVIVAMTLEEAYEAVDSMLLK--NAFGSAGCRVIIEEFLEG-EEASFFALVDG-ENAIPLESAQDHKRVG 302 (519)
Q Consensus 227 vKP~~g~gs~GV~~v~~~~el~~a~~~~~~~--~~~~~~~~~~lvEe~I~G-~E~sv~~l~dg-~~~~~~~~~~~~~~~~ 302 (519)
+||..++||+||+++++.+|+.++++.++.. ..++ +..++|||||+| +|+++.++.++ +.+..+.... . ...
T Consensus 156 vKp~~g~gg~Gv~~v~~~~el~~~~~~~~~~~~~~~~--~~~~lvEe~i~g~~e~~v~v~~~~~G~~~~~~~~~-~-~~~ 231 (451)
T 1ulz_A 156 LKATAGGGGRGIRICRNEEELVKNYEQASREAEKAFG--RGDLLLEKFIENPKHIEYQVLGDKHGNVIHLGERD-C-SIQ 231 (451)
T ss_dssp EEECSSSSCCSCEEESSHHHHHHHHHHHHHHHHHTTS--CCCEEEEECCCSCEEEEEEEEECTTSCEEEEEEEE-E-EEE
T ss_pred EEECCCCCCccEEEeCCHHHHHHHHHHHHHHHHHhcC--CCeEEEEEcccCCeEEEEEEEEcCCCCEEEEeeee-c-ccc
Confidence 9999999999999999999999999887642 1222 468999999999 89999999864 3344333110 0 000
Q ss_pred CCCCCCCCCCceEEecCCCCCHHHHHHHHHHHHHHHHHHHHHcCCCeeeEEEEEEEEEcCCCceEEEEEeCCCCCCchHH
Q 010065 303 DGDTGPNTGGMGAYSPAPVLTKELQSVVMESIILPTVKGMSAEGCKFVGVLYAGLMIEKKSGLPKLIEYNVRFGDPECQV 382 (519)
Q Consensus 303 ~~~~~~~~g~~~~~~P~~~l~~~~~~~i~~~a~~~~~~~~~a~g~~~~G~~~vdf~~~~~g~~~~viEiN~R~G~~~~~~ 382 (519)
. + ........|++.++++..+++.+.+ .++++++|+. |++++||+++++| ++||+|+|||++++.. .
T Consensus 232 ~-~----~~~~~~~~P~~~l~~~~~~~i~~~a----~~~~~~lg~~--G~~~ve~~~~~~g-~~~viEiN~R~~~~~~-~ 298 (451)
T 1ulz_A 232 R-R----NQKLVEIAPSLILTPEKREYYGNIV----TKAAKEIGYY--NAGTMEFIADQEG-NLYFIEMNTRIQVEHP-V 298 (451)
T ss_dssp E-T----TEEEEEEESCSSCCHHHHHHHHHHH----HHHHHHTTCC--EEEEEEEEECTTC-CEEEEEEECSCCTTHH-H
T ss_pred c-c----cccceeECCcccCCHHHHHHHHHHH----HHHHHHcCCC--cceEEEEEEeCCC-CEEEEEeeCCCCccch-H
Confidence 0 0 0011334677658888888877765 4677888876 9999999999876 7999999999988643 3
Q ss_pred HHHHhCCCHHHHHHHHHhCCCCCC---CcccCCCcEEEEEEecCC----CCCCCCCCcccccchhhhccCCCeEEEEeee
Q 010065 383 LMVRLESDLAEVLLAACRGELTGV---TLNWSPGSAMVVVMASKG----YPGSYEKGSEIQNLEEAEQVAPSVKIFHAGT 455 (519)
Q Consensus 383 ~~~~~G~d~~~~~i~~~~g~~~~~---~~~~~~~~a~~~~l~~~~----~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 455 (519)
+...+|+|+.++++++++|...+. .+.+. +.++...+.+.. ++...+ .+..++.. ..+++++... .
T Consensus 299 ~~~~~g~dl~~~~~~~~~G~~l~~~~~~~~~~-~~a~~~~~~~~~~~~~~~p~~g---~i~~~~~~--~~~~v~~~~~-~ 371 (451)
T 1ulz_A 299 SEMVTGIDIVKWQIKIAAGEPLTIKQEDVKFN-GYAIECRINAEDPKKNFAPSTR---VIERYYVP--GGFGIRVEHA-A 371 (451)
T ss_dssp HHHHHCCCHHHHHHHHHTTCCCCCCGGGCCCC-SEEEEEEEESEEGGGTTEECCS---BCCSEECC--CSTTEEEEEC-C
T ss_pred HHHHhCCCHHHHHHHHHcCCCCCCccccCCCc-eEEEEEeccccCcccCcCCCCc---eeceEECC--CCCCcccccC-c
Confidence 444569999999999999984332 12233 344443333221 110111 12222210 0123433110 0
Q ss_pred eecCCCcEE--ecCCeEEEEEEecCCHHHHHHHHHHHhhccccCCeeecccccc
Q 010065 456 ALDADGNFI--ATGGRVLGVTAKGKDVEEAQDRAYLAVEEINWPGGFYRRDIGW 507 (519)
Q Consensus 456 ~~~~~g~~~--~~~~rvg~vi~~g~t~~ea~~~a~~~~~~i~~~g~~~r~dig~ 507 (519)
..|... ..++++|+|++.|+|.++|+++++++++.++++| ||+|||.
T Consensus 372 ---~~g~~~~~~~~~~~g~v~~~g~~~~ea~~~~~~~~~~i~~~g--~~~~i~~ 420 (451)
T 1ulz_A 372 ---ARGFEVTPYYDSMIAKLITWAPTWDEAVERMRAALETYEITG--VKTTIPL 420 (451)
T ss_dssp ---CTTCBCCSSSCCEEEEEEEEESSHHHHHHHHHHHHHTCEECS--SCCSHHH
T ss_pred ---cCCCEecccccchheEEEEECCCHHHHHHHHHHHHhhcEEeC--ccCCHHH
Confidence 122211 2467899999999999999999999999999999 9999994
No 22
>2w70_A Biotin carboxylase; ligase, ATP-binding, fatty acid biosynthesis, nucleotide-BIN lipid synthesis, ATP-grAsp domain, fragment screening; HET: L22; 1.77A {Escherichia coli} PDB: 1bnc_A 2j9g_A* 2v58_A* 2v59_A* 2v5a_A* 2vr1_A* 2w6m_A* 1dv1_A* 2w6o_A* 2w6n_A* 2w6q_A* 2w6z_A* 2w6p_A* 2w71_A* 3jzf_A* 3jzi_A* 3rv3_A* 3rup_A* 1dv2_A* 3rv4_A* ...
Probab=100.00 E-value=1.7e-41 Score=357.44 Aligned_cols=393 Identities=21% Similarity=0.211 Sum_probs=281.0
Q ss_pred ccEEEEEeCChhHHHHHHHHHhcCCCcEEEEecC-CC-CC-cCCCCCccc--c---CCCCCCHHHHHHHHHHcCCcEEEE
Q 010065 82 RVVVLVIGGGGREHALCYALKRSHSCDAVFCAPG-NA-GI-SNSGDATCI--P---DLDVLDGDAVISFCRKWSVGLVVV 153 (519)
Q Consensus 82 ~~~vliiG~g~~~~~l~~~l~~~~g~~~v~~~~~-~~-~~-~~~~~~~~v--~---~~d~~d~~~l~~~~~~~~id~Vi~ 153 (519)
+++|||+|+|.....+++++++. |++++.++++ +. .. ...++.... + ..+..|.+.++++++++++|+|++
T Consensus 2 ~k~ilI~g~g~~~~~~~~a~~~~-G~~vv~v~~~~~~~~~~~~~ad~~~~~~p~~~~~~~~d~~~l~~~~~~~~~d~v~~ 80 (449)
T 2w70_A 2 LDKIVIANRGEIALRILRACKEL-GIKTVAVHSSADRDLKHVLLADETVCIGPAPSVKSYLNIPAIISAAEITGAVAIHP 80 (449)
T ss_dssp CSEEEECCCHHHHHHHHHHHHHH-TCEEEEEEEGGGTTCHHHHHSSEEEEEECSSGGGTTTCHHHHHHHHHHHTCCEEEC
T ss_pred CceEEEeCCcHHHHHHHHHHHHc-CCeEEEEeccccccCchhhhCCEEEEcCCCCccccccCHHHHHHHHHHcCCCEEEE
Confidence 36899999987667788888876 9999888643 21 11 111111111 0 115667899999999999999999
Q ss_pred C----CChhhHHHHHHHHHHCCCCeeCCcHHHHHHhcCHHHHHHHHHHcCCCCCCee--ecCCHHHH-HHHHHHhCCCEE
Q 010065 154 G----PEAPLVSGLANKLVKAGIPTFGPSSEAAALEGSKNFMKNLCDKYGIPTAKYK--TFTDPNAA-KQYIQEEGAPIV 226 (519)
Q Consensus 154 g----~E~~~~~~~a~~le~~gip~~g~~~~~~~~~~dK~~~k~~l~~~Gi~~p~~~--~v~~~~~~-~~~~~~~g~P~V 226 (519)
+ +|+.. +++.++.+|+|++|++++++.+++||..++++|+++|||+|++. .+.+.+++ .+++++++||+|
T Consensus 81 ~~g~~~e~~~---~~~~~e~~gi~~~g~~~~~~~~~~dK~~~k~~l~~~gip~p~~~~~~~~~~~~~~~~~~~~~g~Pvv 157 (449)
T 2w70_A 81 GYGFLSENAN---FAEQVERSGFIFIGPKAETIRLMGDKVSAIAAMKKAGVPCVPGSDGPLGDDMDKNRAIAKRIGYPVI 157 (449)
T ss_dssp CSSTTTTCHH---HHHHHHHTTCEESSSCHHHHHHHHSHHHHHHHHHHHTCCBCSBCSSCCCSCHHHHHHHHHHHCSSEE
T ss_pred CCCCcccCHH---HHHHHHHcCCceECCCHHHHHHhcCHHHHHHHHHHcCCCcCCCcccccCCHHHHHHHHHHHhCCcEE
Confidence 6 56653 46679999999999999999999999999999999999999997 78888998 888899999999
Q ss_pred EEeCCCCCCCcEEEeCCHHHHHHHHHHHHhh--ccCCCCCCcEEEEeccCC-cEEEEEEEEeC-CeeEEecccc-ccccc
Q 010065 227 VKADGLAAGKGVIVAMTLEEAYEAVDSMLLK--NAFGSAGCRVIIEEFLEG-EEASFFALVDG-ENAIPLESAQ-DHKRV 301 (519)
Q Consensus 227 vKP~~g~gs~GV~~v~~~~el~~a~~~~~~~--~~~~~~~~~~lvEe~I~G-~E~sv~~l~dg-~~~~~~~~~~-~~~~~ 301 (519)
+||..++||+||.++++.+|+.++++.++.. ..++ +..++|||||+| +|+++.++.++ +.+..+.... ...+.
T Consensus 158 vKp~~g~gg~Gv~~v~~~~el~~~~~~~~~~~~~~~~--~~~~lvEe~i~g~~e~~v~~~~~~~G~~~~~~~~~~~~~~~ 235 (449)
T 2w70_A 158 IKASGGGGGRGMRVVRGDAELAQSISMTRAEAKAAFS--NDMVYMEKYLENPRHVEIQVLADGQGNAIYLAERDCSMQRR 235 (449)
T ss_dssp EEETTCCTTTTCEEECSHHHHHHHHHHHHHHHHHHHS--CCCEEEEECCSSCEEEEEEEEECTTSCEEEEEEEEEEEEET
T ss_pred EEECCCCCCCCEEEeCCHHHHHHHHHHHHHHHHhhcC--CCcEEEEeccCCCeEEEEEEEEcCCCCEEEEeceecccccC
Confidence 9999999999999999999999999877532 1121 468999999998 89999999863 3344333210 00000
Q ss_pred cCCCCCCCCCCceEEecCCCCCHHHHHHHHHHHHHHHHHHHHHcCCCeeeEEEEEEEEEcCCCceEEEEEeCCCCCCchH
Q 010065 302 GDGDTGPNTGGMGAYSPAPVLTKELQSVVMESIILPTVKGMSAEGCKFVGVLYAGLMIEKKSGLPKLIEYNVRFGDPECQ 381 (519)
Q Consensus 302 ~~~~~~~~~g~~~~~~P~~~l~~~~~~~i~~~a~~~~~~~~~a~g~~~~G~~~vdf~~~~~g~~~~viEiN~R~G~~~~~ 381 (519)
+ .......|++.++++..+++.+.+ .++++++|+. |++++||+++++ ++||+|+|||++++..
T Consensus 236 ~--------~~~~~~~p~~~l~~~~~~~i~~~a----~~~~~~lg~~--G~~~ve~~~~~~--~~~viEiN~R~~~~~~- 298 (449)
T 2w70_A 236 H--------QKVVEEAPAPGITPELRRYIGERC----AKACVDIGYR--GAGTFEFLFENG--EFYFIEMNTRIQVEHP- 298 (449)
T ss_dssp T--------EEEEEEESCTTCCHHHHHHHHHHH----HHHHHHHTCC--EEEEEEEEEETT--EEEEEEEECSCCTTHH-
T ss_pred C--------cceeeeCCcccCCHHHHHHHHHHH----HHHHHHcCCC--ceEEEEEEEECC--CEEEEEEECCCCccch-
Confidence 0 012345677668888888887765 4677888876 999999999984 5999999999988643
Q ss_pred HHHHHhCCCHHHHHHHHHhCCCCCCCc-cc-CCCcEEEEEEecCCCCCC-CCCCcccccchhhhccCCCeEE---EEeee
Q 010065 382 VLMVRLESDLAEVLLAACRGELTGVTL-NW-SPGSAMVVVMASKGYPGS-YEKGSEIQNLEEAEQVAPSVKI---FHAGT 455 (519)
Q Consensus 382 ~~~~~~G~d~~~~~i~~~~g~~~~~~~-~~-~~~~a~~~~l~~~~~~~~-~~~~~~i~~~~~~~~~~~~~~~---~~~~~ 455 (519)
.+...+|+|+.++++++++|...+... .. ..+.++...+.+..+-+. +..+ .+..+.. ...+++.+ ++.|.
T Consensus 299 ~~~~~~g~dl~~~~~~~~~G~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g-~i~~~~~--~~~~~v~~~~~~~~g~ 375 (449)
T 2w70_A 299 VTEMITGVDLIKEQLRIAAGQPLSIKQEEVHVRGHAVECRINAEDPNTFLPSPG-KITRFHA--PGGFGVRWESHIYAGY 375 (449)
T ss_dssp HHHHHHCCCHHHHHHHHHHTCCCSSCGGGCCCCSEEEEEEEECBCTTTCCBCCE-ECCEEEC--CCSTTEEEECCCCTTC
T ss_pred HHHHHhCCCHHHHHHHHHCCCCCCCchhccccceeEEEEeecccCccccCCCCC-EeceEEC--CCCCcEEEEeccccCC
Confidence 334456999999999999998433211 11 124454444333221010 0011 1222110 01133332 12222
Q ss_pred eecCCCcEEecCCeEEEEEEecCCHHHHHHHHHHHhhccccCCeeecccccc
Q 010065 456 ALDADGNFIATGGRVLGVTAKGKDVEEAQDRAYLAVEEINWPGGFYRRDIGW 507 (519)
Q Consensus 456 ~~~~~g~~~~~~~rvg~vi~~g~t~~ea~~~a~~~~~~i~~~g~~~r~dig~ 507 (519)
.. . ...+.++|+|++.|+|.++|+++++++++.++++| ||+|||.
T Consensus 376 ~~--~---~~~~~~~~~v~~~g~~~~~a~~~~~~~~~~i~~~g--~~~~i~~ 420 (449)
T 2w70_A 376 TV--P---PYYDSMIGKLICYGENRDVAIARMKNALQELIIDG--IKTNVDL 420 (449)
T ss_dssp EE--C---SSSCSEEEEEEEEESSHHHHHHHHHHHHHHCEEES--SCCSHHH
T ss_pred Ee--c---cccCcceEEEEEEcCCHHHHHHHHHHHHhhcEEeC--cCCCHHH
Confidence 21 0 13567899999999999999999999999999999 9999994
No 23
>3ax6_A Phosphoribosylaminoimidazole carboxylase, ATPase; structural genomics, riken structural genomics/proteomics in RSGI, ATP grAsp, ATP binding; HET: ADP; 2.20A {Thermotoga maritima}
Probab=100.00 E-value=4.1e-41 Score=346.85 Aligned_cols=365 Identities=18% Similarity=0.172 Sum_probs=269.6
Q ss_pred cEEEEEeCChhHHHHHHHHHhcCCCcEEEEecCCCCC-cCCCCCccccCCCCCCHHHHHHHHHHcCCcEEEECCChhhHH
Q 010065 83 VVVLVIGGGGREHALCYALKRSHSCDAVFCAPGNAGI-SNSGDATCIPDLDVLDGDAVISFCRKWSVGLVVVGPEAPLVS 161 (519)
Q Consensus 83 ~~vliiG~g~~~~~l~~~l~~~~g~~~v~~~~~~~~~-~~~~~~~~v~~~d~~d~~~l~~~~~~~~id~Vi~g~E~~~~~ 161 (519)
++|+|+|+|.....+++++++. |+++++++++.... ...++ ..+ ..+..|.+.+.+++ .++|+|+++.|+.. .
T Consensus 2 ~~Ililg~g~~g~~~~~a~~~~-G~~v~~~~~~~~~~~~~~~~-~~~-~~~~~d~~~l~~~~--~~~d~v~~~~e~~~-~ 75 (380)
T 3ax6_A 2 KKIGIIGGGQLGKMMTLEAKKM-GFYVIVLDPTPRSPAGQVAD-EQI-VAGFFDSERIEDLV--KGSDVTTYDLEHID-V 75 (380)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-TCEEEEEESSTTCTTGGGSS-EEE-ECCTTCHHHHHHHH--HTCSEEEESCSCSC-H
T ss_pred CEEEEECCCHHHHHHHHHHHHC-CCEEEEEeCCCCCchhhhCc-eEE-ECCCCCHHHHHHHH--hcCCEEEecccCCC-H
Confidence 6899999995445577888776 99999888653221 11211 122 45777889999988 57999999888765 3
Q ss_pred HHHHHHHHCCCCeeCCcHHHHHHhcCHHHHHHHHHHcCCCCCCeeecCCHHHHHHHHHHhCCCEEEEeCCCC-CCCcEEE
Q 010065 162 GLANKLVKAGIPTFGPSSEAAALEGSKNFMKNLCDKYGIPTAKYKTFTDPNAAKQYIQEEGAPIVVKADGLA-AGKGVIV 240 (519)
Q Consensus 162 ~~a~~le~~gip~~g~~~~~~~~~~dK~~~k~~l~~~Gi~~p~~~~v~~~~~~~~~~~~~g~P~VvKP~~g~-gs~GV~~ 240 (519)
.+++.++.+|+| ++++++++.+++||..++++|+++|||+|++..+++.++ ++++++||+|+||..++ +|+||.+
T Consensus 76 ~~~~~l~~~gi~-~~~~~~~~~~~~dK~~~~~~l~~~gip~p~~~~~~~~~~---~~~~~~~P~vvKp~~~~y~g~Gv~~ 151 (380)
T 3ax6_A 76 QTLKKLYNEGYK-IHPSPYTLEIIQDKFVQKEFLKKNGIPVPEYKLVKDLES---DVREFGFPVVQKARKGGYDGRGVFI 151 (380)
T ss_dssp HHHHHHHHTTCE-ESSCHHHHHHHHSHHHHHHHHHHTTCCCCCEEECSSHHH---HHHTTCSSEEEEESCCC-----EEE
T ss_pred HHHHHHHHCCCe-ECCCHHHHHHhcCHHHHHHHHHHcCCCCCCeEEeCCHHH---HHHhcCCCEEEEecCCCCCCCCeEE
Confidence 556778999999 469999999999999999999999999999999998877 56789999999999999 9999999
Q ss_pred eCCHHHHHHHHHHHHhhccCCCCCCcEEEEeccC-CcEEEEEEEEeC-CeeEEeccccccccccCCCCCCCCCCceEEec
Q 010065 241 AMTLEEAYEAVDSMLLKNAFGSAGCRVIIEEFLE-GEEASFFALVDG-ENAIPLESAQDHKRVGDGDTGPNTGGMGAYSP 318 (519)
Q Consensus 241 v~~~~el~~a~~~~~~~~~~~~~~~~~lvEe~I~-G~E~sv~~l~dg-~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~P 318 (519)
+++.+|+.++++ ..++|||||+ |+|+++.+++++ +.+..++....+ ++...+. ....+.|
T Consensus 152 v~~~~el~~~~~------------~~~lvEe~i~~g~e~sv~~~~~~~G~~~~~~~~~~~---~~~~~~~---~~~~~~p 213 (380)
T 3ax6_A 152 IKNEKDLENAIK------------GETYLEEFVEIEKELAVMVARNEKGEIACYPVVEMY---FDEDANI---CDTVIAP 213 (380)
T ss_dssp ECSGGGGGGCCC------------SSEEEEECCCEEEEEEEEEEECSSCCEEEEEEEEEC--------------CEEEES
T ss_pred ECCHHHHHHHhc------------CCEEEEeccCCCeeEEEEEEECCCCCEEEECCeeee---ecccCCe---eEEEECC
Confidence 999998765432 6899999999 799999999863 234434333322 0000010 1245789
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHHcCCCeeeEEEEEEEEEcCCCceEEEEEeCCCCCCchHHHHHHhCCCHHHHHHHH
Q 010065 319 APVLTKELQSVVMESIILPTVKGMSAEGCKFVGVLYAGLMIEKKSGLPKLIEYNVRFGDPECQVLMVRLESDLAEVLLAA 398 (519)
Q Consensus 319 ~~~l~~~~~~~i~~~a~~~~~~~~~a~g~~~~G~~~vdf~~~~~g~~~~viEiN~R~G~~~~~~~~~~~G~d~~~~~i~~ 398 (519)
++ ++++..+++++.+ .++++++|+. |++++||+++++| ++|++|+|||||++.++. ...+|.|+++.+++.
T Consensus 214 ~~-l~~~~~~~~~~~a----~~~~~~lg~~--G~~~vd~~~~~~g-~~~viEiN~R~~~~~~~~-~~~~~~~~~~~~~~~ 284 (380)
T 3ax6_A 214 AR-IEEKYSKIAREIA----TSVVEALEGV--GIFGIEMFLTKQG-EILVNEIAPRPHNSGHYT-IEACVTSQFEQHIRA 284 (380)
T ss_dssp CS-SCHHHHHHHHHHH----HHHHHHHTCC--EEEEEEEEEETTS-CEEEEEEESSCCGGGTHH-HHHBSSCHHHHHHHH
T ss_pred CC-CCHHHHHHHHHHH----HHHHHHCCCe--EEEEEEEEEeCCC-cEEEEEecCCCCCCceee-hhhccccHHHHHHHH
Confidence 88 8998888887766 4677888875 9999999999877 799999999999987753 345799999999999
Q ss_pred HhCCCCCCCcccCCCcEEEEEEecCCC-CCCCCCCcccccchhhhccCCCeEEEEeeeeecCCCcEEecCCeEEEEEEec
Q 010065 399 CRGELTGVTLNWSPGSAMVVVMASKGY-PGSYEKGSEIQNLEEAEQVAPSVKIFHAGTALDADGNFIATGGRVLGVTAKG 477 (519)
Q Consensus 399 ~~g~~~~~~~~~~~~~a~~~~l~~~~~-~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~rvg~vi~~g 477 (519)
++|.......... .+++.++++..+| +... ...+++++ . .+++.+++++... .+.+.++|+|++.|
T Consensus 285 ~~g~~l~~~~~~~-~~~~~~~l~~~~~~~~~~----~~~~~~~~-~-~p~~~~~~~g~~~------~~~~~~lg~v~~~g 351 (380)
T 3ax6_A 285 IMNLPLGSTELLI-PAVMVNLLGEEGYYGKPA----LIGLEEAL-A-IEGLSLHFYGKKE------TRPYRKMGHFTVVD 351 (380)
T ss_dssp HTTCCCCCCCBCS-CEEEEEEEBCTTCCBSEE----EESHHHHH-T-STTEEEEECCCSC------BCBTCEEEEEEEEC
T ss_pred HhCCCCCCccccC-ceEEEEEecccccccccc----cchhHHHh-c-CCCCEEEecCCCC------CCCCCeeEEEEEEe
Confidence 9987433221222 3566777777665 3221 13345554 2 3566777765432 23567788999999
Q ss_pred CCHHHHHHHHHHHhhccccC
Q 010065 478 KDVEEAQDRAYLAVEEINWP 497 (519)
Q Consensus 478 ~t~~ea~~~a~~~~~~i~~~ 497 (519)
+|.++|+++++++++.|+++
T Consensus 352 ~~~~~a~~~~~~~~~~i~~~ 371 (380)
T 3ax6_A 352 RDVERALEKALRAKKILKVV 371 (380)
T ss_dssp SSHHHHHHHHHHHTTTCEEE
T ss_pred CCHHHHHHHHHHHHhhhhhh
Confidence 99999999999999998874
No 24
>3k5i_A Phosphoribosyl-aminoimidazole carboxylase; purine biosynthesis, ATP-grAsp, lyase; HET: NHE ADP AIR; 2.00A {Aspergillus clavatus} PDB: 3k5h_A*
Probab=100.00 E-value=7.4e-41 Score=346.92 Aligned_cols=371 Identities=17% Similarity=0.194 Sum_probs=282.7
Q ss_pred CccEEEEEeCChhHHHHHHHHHhcCCCcEEEEecCCCCCcCCCCC-ccccCCCCCCHHHHHHHHHHcCCcEEEECCChhh
Q 010065 81 QRVVVLVIGGGGREHALCYALKRSHSCDAVFCAPGNAGISNSGDA-TCIPDLDVLDGDAVISFCRKWSVGLVVVGPEAPL 159 (519)
Q Consensus 81 ~~~~vliiG~g~~~~~l~~~l~~~~g~~~v~~~~~~~~~~~~~~~-~~v~~~d~~d~~~l~~~~~~~~id~Vi~g~E~~~ 159 (519)
..++|+|+|+|.....+++++++. |++++.++..+......++. ..+ ..+..|.+.+.+++++ +|+|++..|...
T Consensus 23 ~~~~I~ilGgG~lg~~l~~aa~~l-G~~v~~~d~~~~p~~~~ad~~~~~-~~~~~d~~~l~~~a~~--~d~i~~e~e~~~ 98 (403)
T 3k5i_A 23 NSRKVGVLGGGQLGRMLVESANRL-NIQVNVLDADNSPAKQISAHDGHV-TGSFKEREAVRQLAKT--CDVVTAEIEHVD 98 (403)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHHH-TCEEEEEESTTCTTGGGCCSSCCE-ESCTTCHHHHHHHHTT--CSEEEESSSCSC
T ss_pred CCCEEEEECCCHHHHHHHHHHHHC-CCEEEEEECCCCcHHHhcccccee-ecCCCCHHHHHHHHHh--CCEEEECCCCCC
Confidence 357999999998777788888876 99999888223222333221 222 4577889999998865 788888777654
Q ss_pred HHHHHHHHHHCCCCeeCCcHHHHHHhcCHHHHHHHHHHcCCCCCCeeecC--CHHHHHHHHHHhCCCEEEEeCCCC-CCC
Q 010065 160 VSGLANKLVKAGIPTFGPSSEAAALEGSKNFMKNLCDKYGIPTAKYKTFT--DPNAAKQYIQEEGAPIVVKADGLA-AGK 236 (519)
Q Consensus 160 ~~~~a~~le~~gip~~g~~~~~~~~~~dK~~~k~~l~~~Gi~~p~~~~v~--~~~~~~~~~~~~g~P~VvKP~~g~-gs~ 236 (519)
. .+.+.++. |+| +|++++++.+++||..+|++|+++|||+|++..+. +.+++.++++++|||+|+||..++ +|+
T Consensus 99 ~-~~l~~l~~-g~~-v~p~~~a~~~~~dK~~~k~~l~~~Gip~p~~~~~~~~~~~~~~~~~~~~g~P~VvKp~~gg~~g~ 175 (403)
T 3k5i_A 99 T-YALEEVAS-EVK-IEPSWQAIRTIQNKFNQKEHLRKYGIPMAEHRELVENTPAELAKVGEQLGYPLMLKSKTMAYDGR 175 (403)
T ss_dssp H-HHHHHHTT-TSE-ESSCHHHHHHHTSHHHHHHHHHTTTCCBCCEEEESSCCHHHHHHHHHHHCSSEEEEESSSCCTTT
T ss_pred H-HHHHHHHc-CCc-cCcCHHHHHHhcCHHHHHHHHHHCCcCCCCEEEEcCCCHHHHHHHHHHhCCCEEEEeCCCCcCCC
Confidence 3 45667888 998 68999999999999999999999999999999999 999999999999999999999887 999
Q ss_pred cEEEeCCHHHHHHHHHHHHhhccCCCCCCcEEEEeccC-CcEEEEEEEEeCCeeEEeccccccccccCCCCCCCCCCceE
Q 010065 237 GVIVAMTLEEAYEAVDSMLLKNAFGSAGCRVIIEEFLE-GEEASFFALVDGENAIPLESAQDHKRVGDGDTGPNTGGMGA 315 (519)
Q Consensus 237 GV~~v~~~~el~~a~~~~~~~~~~~~~~~~~lvEe~I~-G~E~sv~~l~dg~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 315 (519)
|++++++.+|+.++++.+ .+..+|||+||+ |+|+++.+++++..+..++....... + +. ....
T Consensus 176 Gv~~v~~~~el~~a~~~~--------~~~~~lvEe~i~~~~E~sv~v~~~~~g~~~~p~~~~~~~--~---g~---~~~~ 239 (403)
T 3k5i_A 176 GNFRVNSQDDIPEALEAL--------KDRPLYAEKWAYFKMELAVIVVKTKDEVLSYPTVETVQE--D---SI---CKLV 239 (403)
T ss_dssp TEEEECSTTSHHHHHHHT--------TTSCEEEEECCCEEEEEEEEEEECSSCEEECCCEEEEEE--T---TE---EEEE
T ss_pred CEEEECCHHHHHHHHHhc--------CCCcEEEecCCCCCeEEEEEEEEcCCCEEEeCCeeeEEe--C---CE---EEEE
Confidence 999999999999998865 247899999999 59999999986543333333221111 0 00 1245
Q ss_pred EecCCCCCHHHHHHHHHHHHHHHHHHHHHcCCCeeeEEEEEEEEEcCCCceEEEEEeCCCCCCchHHHHHHhCCCHHHHH
Q 010065 316 YSPAPVLTKELQSVVMESIILPTVKGMSAEGCKFVGVLYAGLMIEKKSGLPKLIEYNVRFGDPECQVLMVRLESDLAEVL 395 (519)
Q Consensus 316 ~~P~~~l~~~~~~~i~~~a~~~~~~~~~a~g~~~~G~~~vdf~~~~~g~~~~viEiN~R~G~~~~~~~~~~~G~d~~~~~ 395 (519)
+.|++.++++..+++++.+ .+++.++|+. |++++||+++++| ++||+|||||||++.++.+. .+|+|+++++
T Consensus 240 ~~Pa~~l~~~~~~~~~~~a----~~i~~~Lg~~--G~~~ve~~~~~dg-~~~v~EiNpR~~~sg~~~~~-~~~~s~~~~~ 311 (403)
T 3k5i_A 240 YAPARNVSDAINQKAQELA----RKAVAAFDGK--GVFGVEMFLLEDD-SIMLCEIASRIHNSGHYTIE-GCALSQFDAH 311 (403)
T ss_dssp EESCSSCCHHHHHHHHHHH----HHHHHTSCCS--EEEEEEEEEETTS-CEEEEEEESSCCGGGTTHHH-HBSSCHHHHH
T ss_pred EeCCCCCCHHHHHHHHHHH----HHHHHHcCCe--eEEEEEEEEeCCC-cEEEEEeecCCCCCCceeee-ecCCCHHHHH
Confidence 6788768888888888776 4677888865 9999999999876 79999999999988775553 4699999999
Q ss_pred HHHHhCCCC-CCCcccCCCcEEEEEEecCCCCCCCCCCcccccchhhhccCCCeEEEEeeeeecCCCcEEecCCeEEEEE
Q 010065 396 LAACRGELT-GVTLNWSPGSAMVVVMASKGYPGSYEKGSEIQNLEEAEQVAPSVKIFHAGTALDADGNFIATGGRVLGVT 474 (519)
Q Consensus 396 i~~~~g~~~-~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~rvg~vi 474 (519)
+++++|... ++.+.....+.+.++++... + ...+.+++++.+ .+++.+++++... ...+.++|+|+
T Consensus 312 ~ra~~G~pl~~~~~~~~~~a~m~nilg~~~-~-----~~~~~~~~~~~~-~p~~~~~~ygk~~------~~~~rkmGhv~ 378 (403)
T 3k5i_A 312 LRAILDLPIPAQSLEIRQPSIMLNIIGGAA-P-----DTHLQAAECALS-IPNASIHLYSKGA------AKPGRKMGHIT 378 (403)
T ss_dssp HHHHTTCCCCGGGGSBSSCEEEEEEECCSS-S-----SHHHHHHHHHTT-STTEEEEECCCCS------CCTTCEEEEEE
T ss_pred HHHHcCCCCCcccccCCCcEEEEEEecCCc-c-----ccchhHHHHHhc-CCCCEEEECCCCC------CCCCCeeEEEE
Confidence 999999743 22233322245666766432 1 123556666654 5777887776532 13457789999
Q ss_pred EecCCHHHHHHHHHHHhhccc
Q 010065 475 AKGKDVEEAQDRAYLAVEEIN 495 (519)
Q Consensus 475 ~~g~t~~ea~~~a~~~~~~i~ 495 (519)
+.|+|.++|+++|.++++.++
T Consensus 379 ~~~~~~~~~~~~a~~~~~~~~ 399 (403)
T 3k5i_A 379 VTAPTMHEAETHIQPLIDVVD 399 (403)
T ss_dssp EECSSHHHHHHHHHHHHHHHH
T ss_pred EEcCCHHHHHHHHHHHHhhhh
Confidence 999999999999999988765
No 25
>2dwc_A PH0318, 433AA long hypothetical phosphoribosylglycinamide transferase; purine ribonucleotide biosynthesis; HET: ADP; 1.70A {Pyrococcus horikoshii} PDB: 2czg_A*
Probab=100.00 E-value=4.7e-41 Score=352.42 Aligned_cols=385 Identities=18% Similarity=0.143 Sum_probs=280.0
Q ss_pred ccEEEEEeCChhHHHHHHHHHhcCCCcEEEEecCCCCC-cCCCCCccccCCCCCCHHHHHHHHHHcCCcEEEECCChhhH
Q 010065 82 RVVVLVIGGGGREHALCYALKRSHSCDAVFCAPGNAGI-SNSGDATCIPDLDVLDGDAVISFCRKWSVGLVVVGPEAPLV 160 (519)
Q Consensus 82 ~~~vliiG~g~~~~~l~~~l~~~~g~~~v~~~~~~~~~-~~~~~~~~v~~~d~~d~~~l~~~~~~~~id~Vi~g~E~~~~ 160 (519)
+++|||+|+|.....+++++++. |++++.+++..... ....+ ..+ ..+..|.+.++++++++++|+|+++.|+...
T Consensus 19 ~~~ili~g~g~~g~~~~~a~~~~-G~~v~~v~~~~~~~~~~~ad-~~~-~~~~~d~~~l~~~~~~~~~d~V~~~~e~~~~ 95 (433)
T 2dwc_A 19 AQKILLLGSGELGKEIAIEAQRL-GVEVVAVDRYANAPAMQVAH-RSY-VGNMMDKDFLWSVVEREKPDAIIPEIEAINL 95 (433)
T ss_dssp CCEEEEESCSHHHHHHHHHHHHT-TCEEEEEESSTTCHHHHHSS-EEE-ESCTTCHHHHHHHHHHHCCSEEEECSSCSCH
T ss_pred CCEEEEECCCHHHHHHHHHHHHC-CCEEEEEECCCCChhhhhcc-eEE-ECCCCCHHHHHHHHHHcCCCEEEECcccCCH
Confidence 57999999995555677888765 99998887542111 11111 122 4567789999999999999999998887654
Q ss_pred HHHHHHHHHCCCCeeCCcHHHHHHhcCHHHHHHHH-HHcCCCCCCeeecCCHHHHHHHHHHhCCCEEEEeCCCCCCCcEE
Q 010065 161 SGLANKLVKAGIPTFGPSSEAAALEGSKNFMKNLC-DKYGIPTAKYKTFTDPNAAKQYIQEEGAPIVVKADGLAAGKGVI 239 (519)
Q Consensus 161 ~~~a~~le~~gip~~g~~~~~~~~~~dK~~~k~~l-~~~Gi~~p~~~~v~~~~~~~~~~~~~g~P~VvKP~~g~gs~GV~ 239 (519)
.+++.++.+|+ ++|++++++.+++||..+++++ +++|||+|++..+.+.+++.+++++++||+|+||..++||+||+
T Consensus 96 -~~~~~l~~~gi-~~~~~~~~~~~~~dK~~~k~~l~~~~gip~p~~~~~~~~~~~~~~~~~~g~P~vvKp~~g~gg~Gv~ 173 (433)
T 2dwc_A 96 -DALFEFEKDGY-FVVPNARATWIAMHRERLRETLVKEAKVPTSRYMYATTLDELYEACEKIGYPCHTKAIMSSSGKGSY 173 (433)
T ss_dssp -HHHHHHHHTTC-CBSSCHHHHHHHHCHHHHHHHHHHTSCCCCCCEEEESSHHHHHHHHHHHCSSEEEEECCC------E
T ss_pred -HHHHHHHhcCC-eeCCCHHHHHHhhCHHHHHHHHHHhcCCCCCCeeEeCCHHHHHHHHHhcCCCEEEEECCCcCCCCeE
Confidence 45677899999 4589999999999999999999 89999999999999999999999999999999999999999999
Q ss_pred EeCCHHHHHHHHHHHHhhccCCCCCCcEEEEeccC-CcEEEEEEEEe----CCeeEEeccccccc-cccCCCCCCCCCCc
Q 010065 240 VAMTLEEAYEAVDSMLLKNAFGSAGCRVIIEEFLE-GEEASFFALVD----GENAIPLESAQDHK-RVGDGDTGPNTGGM 313 (519)
Q Consensus 240 ~v~~~~el~~a~~~~~~~~~~~~~~~~~lvEe~I~-G~E~sv~~l~d----g~~~~~~~~~~~~~-~~~~~~~~~~~g~~ 313 (519)
++++.+|+.++++.++... + ..+..++|||||+ |.|+++.++++ |+.+..+.....+. ...+ ..
T Consensus 174 ~v~~~~el~~~~~~~~~~~-~-~~~~~~lvEe~i~~g~E~sv~~~~~~~~~G~~~~~~~~~~~~~~~~~~--------~~ 243 (433)
T 2dwc_A 174 FVKGPEDIPKAWEEAKTKA-R-GSAEKIIVEEHIDFDVEVTELAVRHFDENGEIVTTFPKPVGHYQIDGD--------YH 243 (433)
T ss_dssp EECSGGGHHHHHHC-----------CCEEEEECCCCSEEEEECCEEEECTTSCEEEEEECCEEEEESSSS--------EE
T ss_pred EECCHHHHHHHHHHHHhhc-c-cCCCCEEEEccCCCCeeEEEEEEecccCCCCEeEEEecccceEEEcCE--------EE
Confidence 9999999999998765310 0 0246899999999 89999999984 44222222211111 1111 12
Q ss_pred eEEecCCCCCHHHHHHHHHHHHHHHHHHHHHcCCCeeeEEEEEEEEEcCCCceEEEEEeCCCCCCchHHHHHH-hCCCHH
Q 010065 314 GAYSPAPVLTKELQSVVMESIILPTVKGMSAEGCKFVGVLYAGLMIEKKSGLPKLIEYNVRFGDPECQVLMVR-LESDLA 392 (519)
Q Consensus 314 ~~~~P~~~l~~~~~~~i~~~a~~~~~~~~~a~g~~~~G~~~vdf~~~~~g~~~~viEiN~R~G~~~~~~~~~~-~G~d~~ 392 (519)
..+.|++ ++++..+++.+.+ .+++.++|+. |++++||++++++ +||+|+|||+|++.++.+... +|+|++
T Consensus 244 ~~~~p~~-l~~~~~~~i~~~a----~~~~~~lg~~--G~~~ve~~~~~~~--~~viEiN~R~~~~~~~~~~~~~~g~~~~ 314 (433)
T 2dwc_A 244 ASWQPAE-ISEKAEREVYRIA----KRITDVLGGL--GIFGVEMFVKGDK--VWANEVSPRPHDTGMVTLASHPPGFSEF 314 (433)
T ss_dssp EEEESCC-CCHHHHHHHHHHH----HHHHHHHCSS--EECEEEEEEETTE--EEEEEEESSCCGGGGGHHHHSCTTCSHH
T ss_pred EEEcCCC-CCHHHHHHHHHHH----HHHHHHcCCe--eEEEEEEEEeCCc--EEEEEEeCCcCCCcceehhHhccCCCHH
Confidence 4567888 8998888887766 4677888875 9999999999875 999999999999877666554 499999
Q ss_pred HHHHHHHhCCCCCC-------CcccCCCcEEEEEEecCCCCCCCCCCcccccchhhhccCCCeEEEEeeeeecCCCcEEe
Q 010065 393 EVLLAACRGELTGV-------TLNWSPGSAMVVVMASKGYPGSYEKGSEIQNLEEAEQVAPSVKIFHAGTALDADGNFIA 465 (519)
Q Consensus 393 ~~~i~~~~g~~~~~-------~~~~~~~~a~~~~l~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 465 (519)
++++++++|..... .+.+...+++.++++. . |+ ....+.+++++.. .+++.++..+.. ...
T Consensus 315 ~~~~~~~~G~~l~~~~~~~~~~~~~~~~a~~~~v~~~-~-~~---~~~~i~g~~~~~~-~pg~~v~~~~~~------~~~ 382 (433)
T 2dwc_A 315 ALHLRAVLGLPIPGEWVDGYRLFPMLIPAATHVIKAK-V-SG---YSPRFRGLVKALS-VPNATVRLFGKP------EAY 382 (433)
T ss_dssp HHHHHHHHTCCCCCEEETTEEEECCSSCEEEEEEECS-S-CE---ESCEEECHHHHTT-STTEEEEECCCS------EEC
T ss_pred HHHHHHHcCCCCCcccccccccccccccEEEEEEEcC-C-CC---cCcCcchHHHHhh-CCCcEEEEecCC------CCC
Confidence 99999999984432 2344433444555443 2 22 2234566666543 455544433221 134
Q ss_pred cCCeEEEEEEecCCHHHHHHHHHHHhhccccCCeeec
Q 010065 466 TGGRVLGVTAKGKDVEEAQDRAYLAVEEINWPGGFYR 502 (519)
Q Consensus 466 ~~~rvg~vi~~g~t~~ea~~~a~~~~~~i~~~g~~~r 502 (519)
.+.++|+|++.|+|.++|.++++++++.++++|...+
T Consensus 383 ~~~~lg~v~~~g~~~~ea~~~~~~~~~~i~~~~~~~~ 419 (433)
T 2dwc_A 383 VGRRLGIALAWDKDVEVAKRKAEMVAHMIELRTRSSD 419 (433)
T ss_dssp TTCEEEEEEEECSSHHHHHHHHHHHHHTCEEECTTSC
T ss_pred CCCeEEEEEEEeCCHHHHHHHHHHHHhheEEEeeccC
Confidence 5678899999999999999999999999999987766
No 26
>4e4t_A Phosphoribosylaminoimidazole carboxylase, ATPase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.55A {Burkholderia ambifaria} PDB: 3uvz_A
Probab=100.00 E-value=1.6e-40 Score=345.61 Aligned_cols=377 Identities=16% Similarity=0.150 Sum_probs=284.8
Q ss_pred CCCccEEEEEeCChhHHHHHHHHHhcCCCcEEEEecCCCCC-cCCCCCccccCCCCCCHHHHHHHHHHcCCcEEEECCCh
Q 010065 79 AGQRVVVLVIGGGGREHALCYALKRSHSCDAVFCAPGNAGI-SNSGDATCIPDLDVLDGDAVISFCRKWSVGLVVVGPEA 157 (519)
Q Consensus 79 ~~~~~~vliiG~g~~~~~l~~~l~~~~g~~~v~~~~~~~~~-~~~~~~~~v~~~d~~d~~~l~~~~~~~~id~Vi~g~E~ 157 (519)
+...++|+|+|+|.....+++++++. |+++++++++.... ...++ ..+ ..+..|.+.+.++++ ++|+|+++.|.
T Consensus 32 ~~~~~~IlIlG~G~lg~~~~~aa~~l-G~~v~v~d~~~~~p~~~~ad-~~~-~~~~~d~~~l~~~a~--~~D~V~~~~e~ 106 (419)
T 4e4t_A 32 ILPGAWLGMVGGGQLGRMFCFAAQSM-GYRVAVLDPDPASPAGAVAD-RHL-RAAYDDEAALAELAG--LCEAVSTEFEN 106 (419)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHT-TCEEEEECSCTTCHHHHHSS-EEE-CCCTTCHHHHHHHHH--HCSEEEECCTT
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHC-CCEEEEECCCCcCchhhhCC-EEE-ECCcCCHHHHHHHHh--cCCEEEEccCc
Confidence 44568999999997767778887766 99998887542221 12222 223 467788999999994 68999998776
Q ss_pred hhHHHHHHHHHHCCCCeeCCcHHHHHHhcCHHHHHHHHHHcCCCCCCeeecCCHHHHHHHHHH----hCCCEEEEeC-CC
Q 010065 158 PLVSGLANKLVKAGIPTFGPSSEAAALEGSKNFMKNLCDKYGIPTAKYKTFTDPNAAKQYIQE----EGAPIVVKAD-GL 232 (519)
Q Consensus 158 ~~~~~~a~~le~~gip~~g~~~~~~~~~~dK~~~k~~l~~~Gi~~p~~~~v~~~~~~~~~~~~----~g~P~VvKP~-~g 232 (519)
... .+++.+++. .++|++++++.+++||..+|++|+++|||+|++..+++.+++.+++++ + ||+|+||. .|
T Consensus 107 ~~~-~~~~~l~~~--~~vgp~~~a~~~~~dK~~~k~~l~~~Gip~p~~~~v~~~~e~~~~~~~~~~~~-~P~VvKp~~~g 182 (419)
T 4e4t_A 107 VPA-ASLDFLART--TFVAPAGRCVAVAQDRIAEKRFIEASGVPVAPHVVIESAAALAALDDAALDAV-LPGILKTARLG 182 (419)
T ss_dssp CCH-HHHHHHHTT--SEESSCHHHHHHHTCHHHHHHHHHHTTCCBCCEEEECSHHHHHTSCHHHHHTT-CSEEEEESSSC
T ss_pred CCH-HHHHHHHcc--CCcCCCHHHHHHhcCHHHHHHHHHHcCcCCCCeEEECCHHHHHHHHHhhcccc-CCEEEEecCCC
Confidence 543 456667776 367999999999999999999999999999999999999999888888 9 99999999 88
Q ss_pred CCCCcEEEeCCHHHHHHHHHHHHhhccCCCCCCcEEEEeccCC-cEEEEEEEEeCC-eeEEeccccccccccCCCCCCCC
Q 010065 233 AAGKGVIVAMTLEEAYEAVDSMLLKNAFGSAGCRVIIEEFLEG-EEASFFALVDGE-NAIPLESAQDHKRVGDGDTGPNT 310 (519)
Q Consensus 233 ~gs~GV~~v~~~~el~~a~~~~~~~~~~~~~~~~~lvEe~I~G-~E~sv~~l~dg~-~~~~~~~~~~~~~~~~~~~~~~~ 310 (519)
++|+|++++++.+|+.++++.+ .+..+|||+||+| +|+++.+++|+. .+..++....... + +.
T Consensus 183 ~~G~Gv~~v~~~~el~~a~~~~--------~~~~~lvEe~i~~~~Eisv~v~~~~~G~~~~~~~~e~~~~--~---g~-- 247 (419)
T 4e4t_A 183 YDGKGQVRVSTAREARDAHAAL--------GGVPCVLEKRLPLKYEVSALIARGADGRSAAFPLAQNVHH--N---GI-- 247 (419)
T ss_dssp CTTTTEEEECSHHHHHHHHHHT--------TTCCEEEEECCCEEEEEEEEEEECTTSCEEECCCEEEEEE--T---TE--
T ss_pred CCCCceEEECCHHHHHHHHHhc--------CCCcEEEeecCCCCeEEEEEEEEcCCCCEEEEeCeEEEee--C---Ce--
Confidence 8999999999999999998765 3478999999995 999999998643 3444443322111 0 00
Q ss_pred CCceEEecCCCCCHHHHHHHHHHHHHHHHHHHHHcCCCeeeEEEEEEEEEcCCCceEEEEEeCCCCCCchHHHHHHhCCC
Q 010065 311 GGMGAYSPAPVLTKELQSVVMESIILPTVKGMSAEGCKFVGVLYAGLMIEKKSGLPKLIEYNVRFGDPECQVLMVRLESD 390 (519)
Q Consensus 311 g~~~~~~P~~~l~~~~~~~i~~~a~~~~~~~~~a~g~~~~G~~~vdf~~~~~g~~~~viEiN~R~G~~~~~~~~~~~G~d 390 (519)
-...+.|++.++++..+++++.+ .+++.++|+. |++++||+++++| ++||+|||||||++.++.+ ..+|+|
T Consensus 248 -~~~~~~Pa~~l~~~~~~~~~~~a----~~i~~~lg~~--G~~~vE~~~~~dG-~~~v~EiNpR~~~sg~~t~-~~~~~s 318 (419)
T 4e4t_A 248 -LALTIVPAPAADTARVEEAQQAA----VRIADTLGYV--GVLCVEFFVLEDG-SFVANEMAPRPHNSGHYTV-DACATS 318 (419)
T ss_dssp -EEEEEESCTTCCHHHHHHHHHHH----HHHHHHHTCC--EEEEEEEEEETTC-CEEEEEEESSCCGGGTTHH-HHBSSC
T ss_pred -EEEEEcCCCCCCHHHHHHHHHHH----HHHHHHCCCe--eEEEEEEEEeCCC-CEEEEEEeCCCCCCCCeEe-eccCCC
Confidence 01346788768998888888766 4677888875 9999999999886 7999999999998887544 357999
Q ss_pred HHHHHHHHHhCCCC-CCCcccCCCcEEEEEEecCCCCCCCCCCcccccchhhhccCCCeEEEEeeeeecCCCcEEecCCe
Q 010065 391 LAEVLLAACRGELT-GVTLNWSPGSAMVVVMASKGYPGSYEKGSEIQNLEEAEQVAPSVKIFHAGTALDADGNFIATGGR 469 (519)
Q Consensus 391 ~~~~~i~~~~g~~~-~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~r 469 (519)
++++++++++|... ++.+ .. ..++.++++...++........+.+++++.+ .+++.+++++... ...+.+
T Consensus 319 ~~~~~~ra~~G~pl~~~~~-~~-~~~m~n~lg~~~~~~~~~~~~~~~~~~~~l~-~p~~~~~~ygk~~------~~~~rk 389 (419)
T 4e4t_A 319 QFEQQVRAMTRMPLGNPRQ-HS-PAAMLNILGDVWFPNGAAAGAVTPPWDTVAA-MPAAHLHLYGKEE------ARVGRK 389 (419)
T ss_dssp HHHHHHHHHTTCCCCCCCB-CS-CEEEEEEEGGGGCTTCGGGCCCCCCHHHHHT-STTEEEEECCCSC------CCTTCE
T ss_pred HHHHHHHHHcCCCCCCccc-cC-CeEEEEEecCccccccccccccchHHHHHHh-CCCCEEEECCCCC------CCCCCc
Confidence 99999999999843 3333 22 3567777776433211000122445566654 5777877776432 134578
Q ss_pred EEEEEEecCCHHHHHHHHHHHhhccccC
Q 010065 470 VLGVTAKGKDVEEAQDRAYLAVEEINWP 497 (519)
Q Consensus 470 vg~vi~~g~t~~ea~~~a~~~~~~i~~~ 497 (519)
+|+|++.|+|.++|+++++++.+.|+++
T Consensus 390 mGhv~~~~~~~~~~~~~a~~~~~~l~~~ 417 (419)
T 4e4t_A 390 MGHVNFTAEMRDDAVAAATACAQLLRVP 417 (419)
T ss_dssp EEEEEEECSSHHHHHHHHHHHHHHHTCC
T ss_pred eEEEEEEeCCHHHHHHHHHHHHHhcCcc
Confidence 9999999999999999999999988763
No 27
>2i87_A D-alanine-D-alanine ligase; APO; 2.00A {Staphylococcus aureus subsp} PDB: 2i8c_A* 3n8d_A* 2i80_A*
Probab=100.00 E-value=1.7e-42 Score=354.93 Aligned_cols=309 Identities=16% Similarity=0.136 Sum_probs=228.8
Q ss_pred ceeEEEeeccCCCCCcccccCCCCCCCccEEEEEeCChhHHHHHHHHHhcCCCcEEEEecCCCCCcCCCC--------Cc
Q 010065 55 SFFSTVKCLAQKSQPSVSVNAPTNAGQRVVVLVIGGGGREHALCYALKRSHSCDAVFCAPGNAGISNSGD--------AT 126 (519)
Q Consensus 55 ~~~i~v~~GG~s~e~~vS~~s~~~~~~~~~vliiG~g~~~~~l~~~l~~~~g~~~v~~~~~~~~~~~~~~--------~~ 126 (519)
+|||+||+||.|+||+||+.||.. ++.+|++. |++++.++.+..+.+...+ ..
T Consensus 3 ~~~v~vl~gg~s~E~~vs~~s~~~------------------v~~al~~~-g~~v~~i~~~~~~~~~~~~~~~~~~~~~~ 63 (364)
T 2i87_A 3 KENICIVFGGKSAEHEVSILTAQN------------------VLNAIDKD-KYHVDIIYITNDGDWRKQNNITAEIKSTD 63 (364)
T ss_dssp CEEEEEEEECSSSCHHHHHHHHHH------------------HHHTSCTT-TEEEEEEEECTTCCEEEECCCCSCCCSGG
T ss_pred CcEEEEEECCCCccchhHHHHHHH------------------HHHHHhhc-CCEEEEEEEcCCCCEEeccccccccccch
Confidence 689999999999999999998765 67777665 9998888754322221100 01
Q ss_pred cccCC-CCCC--HHHHHHH-HHHcCCcEEEEC-----CChhhHHHHHHHHHHCCCCeeCCcHHHHHHhcCHHHHHHHHHH
Q 010065 127 CIPDL-DVLD--GDAVISF-CRKWSVGLVVVG-----PEAPLVSGLANKLVKAGIPTFGPSSEAAALEGSKNFMKNLCDK 197 (519)
Q Consensus 127 ~v~~~-d~~d--~~~l~~~-~~~~~id~Vi~g-----~E~~~~~~~a~~le~~gip~~g~~~~~~~~~~dK~~~k~~l~~ 197 (519)
.+ .+ ++.+ ...++.. .+..++|+||+. +|++.++ ..++.+|+|++|++++++.+++||..++++|++
T Consensus 64 ~~-~~~~~~~~~~~~~~~~~~~~~~~D~v~~~~~g~~~ed~~~~---~~le~~gip~~g~~~~~~~~~~dK~~~k~~l~~ 139 (364)
T 2i87_A 64 EL-HLENGEALEISQLLKESSSGQPYDAVFPLLHGPNGEDGTIQ---GLFEVLDVPYVGNGVLSAASSMDKLVMKQLFEH 139 (364)
T ss_dssp GS-CGGGSEEECSSGGGGBCTTSSBCSEEEEECCCSSSCTTHHH---HHHHHHTCCBSSCCHHHHHHHHSHHHHHHHHHH
T ss_pred hh-cccccccccccccccccccccCCCEEEEeCCCCCCcCHHHH---HHHHHcCCCccCCCHHHHHHHcCHHHHHHHHHH
Confidence 11 11 1110 0011100 024579999992 5777654 448999999999999999999999999999999
Q ss_pred cCCCCCCeeecCCHH-------HHHHHHHHhCCCEEEEeCCCCCCCcEEEeCCHHHHHHHHHHHHhhccCCCCCCcEEEE
Q 010065 198 YGIPTAKYKTFTDPN-------AAKQYIQEEGAPIVVKADGLAAGKGVIVAMTLEEAYEAVDSMLLKNAFGSAGCRVIIE 270 (519)
Q Consensus 198 ~Gi~~p~~~~v~~~~-------~~~~~~~~~g~P~VvKP~~g~gs~GV~~v~~~~el~~a~~~~~~~~~~~~~~~~~lvE 270 (519)
+|||+|++..+.+.+ ++.++.++++||+||||..++||.||.++++.+|+.++++.++. .+..+|||
T Consensus 140 ~Gip~p~~~~~~~~~~~~~~~~~~~~~~~~~g~PvvvKP~~g~~s~Gv~~v~~~~el~~a~~~~~~------~~~~~lvE 213 (364)
T 2i87_A 140 RGLPQLPYISFLRSEYEKYEHNILKLVNDKLNYPVFVKPANLGSSVGISKCNNEAELKEGIKEAFQ------FDRKLVIE 213 (364)
T ss_dssp HTCCCCCEEEEEHHHHHHHHHHHHHHHHHHCCSSEEEEESSCSSCTTCEEESSHHHHHHHHHHHHT------TCSEEEEE
T ss_pred CCCCCCCEEEEechhhcccchhHHHHHHHhcCCCEEEEeCCCCCCCCEEEECCHHHHHHHHHHHHh------cCCeEEEE
Confidence 999999999988765 45666788999999999999999999999999999999998863 46799999
Q ss_pred eccCCcEEEEEEEEeCCe-eEEeccccccccccCCCCCCCCCCceEEecCCCCCHHHHHHHHHHHHHHHHHHHHHcCCCe
Q 010065 271 EFLEGEEASFFALVDGEN-AIPLESAQDHKRVGDGDTGPNTGGMGAYSPAPVLTKELQSVVMESIILPTVKGMSAEGCKF 349 (519)
Q Consensus 271 e~I~G~E~sv~~l~dg~~-~~~~~~~~~~~~~~~~~~~~~~g~~~~~~P~~~l~~~~~~~i~~~a~~~~~~~~~a~g~~~ 349 (519)
+||+|+|++|.++.+++. +.+.........++++..+|+.|.+..++|+. ++++..+++++.+ .++++++|+.
T Consensus 214 e~I~G~E~~v~vl~~~~~~~~~~~e~~~~~~~~~~~~k~~~g~~~~~~pa~-l~~~~~~~i~~~a----~~~~~alg~~- 287 (364)
T 2i87_A 214 QGVNAREIEVAVLGNDYPEATWPGEVVKDVAFYDYKSKYKDGKVQLQIPAD-LDEDVQLTLRNMA----LEAFKATDCS- 287 (364)
T ss_dssp ECCCCEEEEEEEEESSSCEECCCEEECCSCCC-----------CCEESSCS-SCHHHHHHHHHHH----HHHHHHTTCC-
T ss_pred eCccCeEEEEEEEcCCCcEEeeeEEEecCCCcCCHHHcccCCCeeEEeCCC-CCHHHHHHHHHHH----HHHHHHcCCC-
Confidence 999999999999986542 22222222223477888888877777889998 9999888888876 4688999987
Q ss_pred eeEEEEEEEEEcCCCceEEEEEeCCCCCCchHHHH----HHhCCCHHHHHHHHHhC
Q 010065 350 VGVLYAGLMIEKKSGLPKLIEYNVRFGDPECQVLM----VRLESDLAEVLLAACRG 401 (519)
Q Consensus 350 ~G~~~vdf~~~~~g~~~~viEiN~R~G~~~~~~~~----~~~G~d~~~~~i~~~~g 401 (519)
|++++||+++++| ++||+|||||||++.+ +++ ..+|+|+.+++.+++..
T Consensus 288 -G~~~vD~~~~~~g-~~~viEiN~rpg~t~~-s~~p~~~~~~G~~~~~l~~~li~~ 340 (364)
T 2i87_A 288 -GLVRADFFVTEDN-QIYINETNAMPGFTAF-SMYPKLWENMGLSYPELITKLIEL 340 (364)
T ss_dssp -EEEEEEEEECTTC-CEEEEEEESSCCCSTT-SHHHHHHHHTTCCHHHHHHHHHHH
T ss_pred -cEEEEEEEEecCC-CEEEEEEeCCCCCCch-hHHHHHHHHhCCCHHHHHHHHHHH
Confidence 9999999999876 7999999999999766 443 34599998887766543
No 28
>3ouz_A Biotin carboxylase; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta fold, cytosol, LIG; HET: MSE ADP SRT TLA; 1.90A {Campylobacter jejuni subsp} PDB: 3ouu_A*
Probab=100.00 E-value=6.6e-41 Score=352.51 Aligned_cols=408 Identities=18% Similarity=0.197 Sum_probs=291.9
Q ss_pred ccEEEEEeCChhHHHHHHHHHhcCCCcEEEEecC-CC-C-CcCCCCCcc-cc----CCCCCCHHHHHHHHHHcCCcEEEE
Q 010065 82 RVVVLVIGGGGREHALCYALKRSHSCDAVFCAPG-NA-G-ISNSGDATC-IP----DLDVLDGDAVISFCRKWSVGLVVV 153 (519)
Q Consensus 82 ~~~vliiG~g~~~~~l~~~l~~~~g~~~v~~~~~-~~-~-~~~~~~~~~-v~----~~d~~d~~~l~~~~~~~~id~Vi~ 153 (519)
++||||+|+|.....+++++++. |++++.++.+ +. . ....++... +. .-+..|.+.+++++++.++|+|+|
T Consensus 6 ~~kiLI~g~g~~a~~i~~aa~~~-G~~~v~v~~~~~~~~~~~~~ad~~~~i~~~~~~~~~~d~~~l~~~~~~~~~d~i~p 84 (446)
T 3ouz_A 6 IKSILIANRGEIALRALRTIKEM-GKKAICVYSEADKDALYLKYADASICIGKARSSESYLNIPAIIAAAEIAEADAIFP 84 (446)
T ss_dssp CCEEEECCCHHHHHHHHHHHHHT-TCEEEEEEEGGGTTCTHHHHSSEEEEEECCTTTTGGGCHHHHHHHHHHHTCSEEEC
T ss_pred cceEEEECCCHHHHHHHHHHHHc-CCEEEEEEcCcccccchHhhCCEEEEcCCCCccccccCHHHHHHHHHHhCcCEEEE
Confidence 57999999997777788888877 9999888533 21 1 111111111 10 114457899999999999999999
Q ss_pred CC----ChhhHHHHHHHHHHCCCCeeCCcHHHHHHhcCHHHHHHHHHHcCCCCCCee--ecCCHHHHHHHHHHhCCCEEE
Q 010065 154 GP----EAPLVSGLANKLVKAGIPTFGPSSEAAALEGSKNFMKNLCDKYGIPTAKYK--TFTDPNAAKQYIQEEGAPIVV 227 (519)
Q Consensus 154 g~----E~~~~~~~a~~le~~gip~~g~~~~~~~~~~dK~~~k~~l~~~Gi~~p~~~--~v~~~~~~~~~~~~~g~P~Vv 227 (519)
+. |+. .+++.+++.|+|++|++++++.+++||..++++|+++|||+|++. .+.+.+++.++++++|||+|+
T Consensus 85 ~~g~~~e~~---~~~~~~~~~g~~~~g~~~~~~~~~~dK~~~~~~l~~~Gip~p~~~~~~~~~~~e~~~~~~~~g~Pvvv 161 (446)
T 3ouz_A 85 GYGFLSENQ---NFVEICAKHNIKFIGPSVEAMNLMSDKSKAKQVMQRAGVPVIPGSDGALAGAEAAKKLAKEIGYPVIL 161 (446)
T ss_dssp CSSTTTTCH---HHHHHHHHTTCEESSCCHHHHHHHHSHHHHHHHHHHTTCCBCSBCSSSCCSHHHHHHHHHHHCSSEEE
T ss_pred CCcccccCH---HHHHHHHHCCCceECcCHHHHHHhCCHHHHHHHHHHcCCCcCCCcccCCCCHHHHHHHHHHhCCCEEE
Confidence 63 443 456779999999999999999999999999999999999999997 789999999999999999999
Q ss_pred EeCCCCCCCcEEEeCCHHHHHHHHHHHHhh--ccCCCCCCcEEEEeccCC-cEEEEEEEEeCC-eeEEeccccccccccC
Q 010065 228 KADGLAAGKGVIVAMTLEEAYEAVDSMLLK--NAFGSAGCRVIIEEFLEG-EEASFFALVDGE-NAIPLESAQDHKRVGD 303 (519)
Q Consensus 228 KP~~g~gs~GV~~v~~~~el~~a~~~~~~~--~~~~~~~~~~lvEe~I~G-~E~sv~~l~dg~-~~~~~~~~~~~~~~~~ 303 (519)
||..++||+||+++++.+|+.++++.+... ..+ .+..++||+||+| +|+++.++.|+. .++.+...... ...
T Consensus 162 Kp~~g~gg~Gv~~v~~~~el~~~~~~~~~~~~~~~--~~~~~lvEe~i~g~~e~~v~v~~d~~g~~~~~~~~~~~--~~~ 237 (446)
T 3ouz_A 162 KAAAGGGGRGMRVVENEKDLEKAYWSAESEAMTAF--GDGTMYMEKYIQNPRHIEVQVIGDSFGNVIHVGERDCS--MQR 237 (446)
T ss_dssp EETTCCTTCSEEEECSGGGHHHHHHHHHHHHHHHH--SCCCEEEEECCSSCEEEEEEEEECTTSCEEEEEEEEEE--EEE
T ss_pred EECCCCCCCCEEEECCHHHHHHHHHHHHHHHHHhc--CCCCEEEEeCCCCCcEEEEEEEEcCCCCEEEEeeceee--eee
Confidence 999999999999999999999999887632 112 1478999999999 899999998764 44444321100 000
Q ss_pred CCCCCCCCCceEEecCCCCCHHHHHHHHHHHHHHHHHHHHHcCCCeeeEEEEEEEEEcCCCceEEEEEeCCCCCCchHHH
Q 010065 304 GDTGPNTGGMGAYSPAPVLTKELQSVVMESIILPTVKGMSAEGCKFVGVLYAGLMIEKKSGLPKLIEYNVRFGDPECQVL 383 (519)
Q Consensus 304 ~~~~~~~g~~~~~~P~~~l~~~~~~~i~~~a~~~~~~~~~a~g~~~~G~~~vdf~~~~~g~~~~viEiN~R~G~~~~~~~ 383 (519)
.. .......|+..++++..+++.+.+. +++.++|+. |++++||+++++| ++||+|||||++++.. ..
T Consensus 238 ~~-----~~~~~~~p~~~l~~~~~~~l~~~a~----~~~~~lg~~--G~~~ve~~~~~~g-~~~~iEiNpR~~g~~~-~~ 304 (446)
T 3ouz_A 238 RH-----QKLIEESPAILLDEKTRTRLHETAI----KAAKAIGYE--GAGTFEFLVDKNL-DFYFIEMNTRLQVEHC-VS 304 (446)
T ss_dssp TT-----EEEEEEESCTTSCHHHHHHHHHHHH----HHHHHTTCC--EEEEEEEEECTTC-CEEEEEEESSCCTTHH-HH
T ss_pred cC-----ceEEEECCCCCCCHHHHHHHHHHHH----HHHHHcCCC--CceEEEEEEeCCC-CEEEEEeECCCCCcce-ee
Confidence 00 0113456885589988888888764 677888877 9999999999875 6999999999988643 44
Q ss_pred HHHhCCCHHHHHHHHHhCCCCCCCc-ccCCCcEEEEEEecCCCCCCC-CCCcccccchhhhccCCCeEEEEeeeeecCCC
Q 010065 384 MVRLESDLAEVLLAACRGELTGVTL-NWSPGSAMVVVMASKGYPGSY-EKGSEIQNLEEAEQVAPSVKIFHAGTALDADG 461 (519)
Q Consensus 384 ~~~~G~d~~~~~i~~~~g~~~~~~~-~~~~~~a~~~~l~~~~~~~~~-~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~g 461 (519)
...+|+|+.++++++++|...+... ....++++.+.+.... |..+ .....+..+... ..+++++... . ..|
T Consensus 305 ~~~~G~dl~~~~~~~~~G~~l~~~~~~~~~g~ai~~ri~ae~-~~~~~p~~G~i~~~~~p--~~~~vr~~~~-~---~~G 377 (446)
T 3ouz_A 305 EMVSGIDIIEQMIKVAEGYALPSQESIKLNGHSIECRITAED-SKTFLPSPGKITKYIPP--AGRNVRMESH-C---YQD 377 (446)
T ss_dssp HHHHCCCHHHHHHHHHTTCCCCCGGGCCCCSEEEEEEEESBC-TTTCCBCCEECSEEECC--CSTTEEEEEC-C---CTT
T ss_pred eeeeCCCHHHHHHHHHCCCCCCcCCCCCcceEEEEEEeeccC-CCccCCCCcEEeEEecC--CCCCEEEEcc-c---ccC
Confidence 4457999999999999998544221 2234677766555432 2111 000112222110 1124444321 1 134
Q ss_pred cEEe--cCCeEEEEEEecCCHHHHHHHHHHHhhccccCCe-----eecccccccccccccccc
Q 010065 462 NFIA--TGGRVLGVTAKGKDVEEAQDRAYLAVEEINWPGG-----FYRRDIGWRALPQKQFAT 517 (519)
Q Consensus 462 ~~~~--~~~rvg~vi~~g~t~~ea~~~a~~~~~~i~~~g~-----~~r~dig~~~~~~~~~~~ 517 (519)
...+ .++++|+|++.|+|.++|.+++.++++.++++|. +.++=+.++.|...++.|
T Consensus 378 ~~v~~~~d~~~~~vi~~g~~~~~a~~~~~~al~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~ 440 (446)
T 3ouz_A 378 YSVPAYYDSMIGKLVVWAEDRNKAIAKMKVALDELLISGIKTTKDFHLSMMENPDFINNNYDT 440 (446)
T ss_dssp CEECTTTCCEEEEEEEEESSHHHHHHHHHHHHHHCEEESSCCTHHHHHHHHTCHHHHTTCCCT
T ss_pred CEeCCccCCcceEEEEEcCCHHHHHHHHHHHHhhCEEeCccCCHHHHHHHhCChhhccCCccc
Confidence 3332 3457999999999999999999999999999983 344444455555555544
No 29
>2vpq_A Acetyl-COA carboxylase; bacteria, ATP-grAsp domain, biotin carboxylase, ligase; HET: ANP; 2.1A {Staphylococcus aureus}
Probab=100.00 E-value=6.4e-41 Score=353.18 Aligned_cols=404 Identities=18% Similarity=0.169 Sum_probs=288.3
Q ss_pred cEEEEEeCChhHHHHHHHHHhcCCCcEEEEecC-CCCC--cCCCCCccc-c----CCCCCCHHHHHHHHHHcCCcEEEEC
Q 010065 83 VVVLVIGGGGREHALCYALKRSHSCDAVFCAPG-NAGI--SNSGDATCI-P----DLDVLDGDAVISFCRKWSVGLVVVG 154 (519)
Q Consensus 83 ~~vliiG~g~~~~~l~~~l~~~~g~~~v~~~~~-~~~~--~~~~~~~~v-~----~~d~~d~~~l~~~~~~~~id~Vi~g 154 (519)
++|||+|+|.....+++++++. |+++++++++ +... ...++.... . ..+..|.+.++++++++++|+|+++
T Consensus 2 k~ilI~g~g~~~~~i~~a~~~~-G~~vv~v~~~~~~~~~~~~~ad~~~~i~~~~~~~~~~d~~~l~~~~~~~~~d~v~~~ 80 (451)
T 2vpq_A 2 KKVLIANRGEIAVRIIRACRDL-GIQTVAIYSEGDKDALHTQIADEAYCVGPTLSKDSYLNIPNILSIATSTGCDGVHPG 80 (451)
T ss_dssp CEEEECCCHHHHHHHHHHHHHT-TCEEEEEEEGGGTTCHHHHHSSEEEEEECSSGGGTTTCHHHHHHHHHHTTCSEEECC
T ss_pred ceEEEeCCCHHHHHHHHHHHHc-CCEEEEEecccccccchhhhCCEEEEcCCCCccccccCHHHHHHHHHHcCCCEEEEC
Confidence 6899999887677788888776 9999988643 2111 111111111 0 1355678999999999999999997
Q ss_pred ----CChhhHHHHHHHHHHCCCCeeCCcHHHHHHhcCHHHHHHHHHHcCCCCCCee--ecCCHHHHHHHHHHhCCCEEEE
Q 010065 155 ----PEAPLVSGLANKLVKAGIPTFGPSSEAAALEGSKNFMKNLCDKYGIPTAKYK--TFTDPNAAKQYIQEEGAPIVVK 228 (519)
Q Consensus 155 ----~E~~~~~~~a~~le~~gip~~g~~~~~~~~~~dK~~~k~~l~~~Gi~~p~~~--~v~~~~~~~~~~~~~g~P~VvK 228 (519)
.|+.. +++.++.+|+|++|++++++.+++||..++++|+++|||+|++. .+.+.+++.+++++++||+|+|
T Consensus 81 ~g~~~e~~~---~~~~~~~~gi~~~g~~~~~~~~~~dK~~~k~~l~~~gip~p~~~~~~~~~~~~~~~~~~~~g~PvvvK 157 (451)
T 2vpq_A 81 YGFLAENAD---FAELCEACQLKFIGPSYQSIQKMGIKDVAKAEMIKANVPVVPGSDGLMKDVSEAKKIAKKIGYPVIIK 157 (451)
T ss_dssp SSTTTTCHH---HHHHHHTTTCEESSSCHHHHHHHHSHHHHHHHHHHTTCCBCSBCSSCBSCHHHHHHHHHHHCSSEEEE
T ss_pred CCccccCHH---HHHHHHHcCCeEECCCHHHHHHhcCHHHHHHHHHHcCCCcCCCcccCcCCHHHHHHHHHhcCCcEEEE
Confidence 55543 56779999999999999999999999999999999999999977 7899999999999999999999
Q ss_pred eCCCCCCCcEEEeCCHHHHHHHHHHHHhh--ccCCCCCCcEEEEeccCC-cEEEEEEEEeC-CeeEEeccccccccccCC
Q 010065 229 ADGLAAGKGVIVAMTLEEAYEAVDSMLLK--NAFGSAGCRVIIEEFLEG-EEASFFALVDG-ENAIPLESAQDHKRVGDG 304 (519)
Q Consensus 229 P~~g~gs~GV~~v~~~~el~~a~~~~~~~--~~~~~~~~~~lvEe~I~G-~E~sv~~l~dg-~~~~~~~~~~~~~~~~~~ 304 (519)
|..++||+||.++++.+|+.++++.++.. ..+ .+..++|||||+| +|+++.++.++ +.+..+..... .....
T Consensus 158 p~~g~gg~Gv~~v~~~~el~~~~~~~~~~~~~~~--~~~~~lvEe~i~g~~e~~v~v~~~~~G~~~~~~~~~~--~~~~~ 233 (451)
T 2vpq_A 158 ATAGGGGKGIRVARDEKELETGFRMTEQEAQTAF--GNGGLYMEKFIENFRHIEIQIVGDSYGNVIHLGERDC--TIQRR 233 (451)
T ss_dssp ETTCCTTCSEEEESSHHHHHHHHHHHHHHHHHHH--SCCCEEEEECCCSEEEEEEEEEECTTSCEEEEEEEEE--EEEET
T ss_pred ECCCCCCCCEEEeCCHHHHHHHHHHHHHHHHhhc--CCCcEEEEEecCCCeEEEEEEEEcCCCCEEEEecccc--chhcc
Confidence 99999999999999999999999877532 112 1378999999999 89999999864 34444432100 00000
Q ss_pred CCCCCCCCceEEecCCCCCHHHHHHHHHHHHHHHHHHHHHcCCCeeeEEEEEEEEE-cCCCceEEEEEeCCCCCCchHHH
Q 010065 305 DTGPNTGGMGAYSPAPVLTKELQSVVMESIILPTVKGMSAEGCKFVGVLYAGLMIE-KKSGLPKLIEYNVRFGDPECQVL 383 (519)
Q Consensus 305 ~~~~~~g~~~~~~P~~~l~~~~~~~i~~~a~~~~~~~~~a~g~~~~G~~~vdf~~~-~~g~~~~viEiN~R~G~~~~~~~ 383 (519)
. .......|++.++++..+++.+.+ .++++++|+. |++++||+++ ++| ++||+|+|||++++.. .+
T Consensus 234 ~-----~~~~~~~P~~~l~~~~~~~i~~~a----~~~~~~lg~~--G~~~ve~~~~~~~g-~~~viEiN~R~~~~~~-~~ 300 (451)
T 2vpq_A 234 M-----QKLVEEAPSPILDDETRREMGNAA----VRAAKAVNYE--NAGTIEFIYDLNDN-KFYFMEMNTRIQVEHP-VT 300 (451)
T ss_dssp T-----EEEEEEESCTTCCHHHHHHHHHHH----HHHHHHTTCC--EEEEEEEEEETTTT-EEEEEEEECSCCTTHH-HH
T ss_pred c-----cceEEEcCCCCCCHHHHHHHHHHH----HHHHHHcCCc--ceEEEEEEEECCCC-CEEEEEeeCCCCCcee-hh
Confidence 0 012345688768888888888876 4677888876 9999999999 666 7999999999988643 34
Q ss_pred HHHhCCCHHHHHHHHHhCCCCCCC---cccCCCcEEEEEEecCC----CCCCCCCCcccccchhhhccCCCeEE---EEe
Q 010065 384 MVRLESDLAEVLLAACRGELTGVT---LNWSPGSAMVVVMASKG----YPGSYEKGSEIQNLEEAEQVAPSVKI---FHA 453 (519)
Q Consensus 384 ~~~~G~d~~~~~i~~~~g~~~~~~---~~~~~~~a~~~~l~~~~----~~~~~~~~~~i~~~~~~~~~~~~~~~---~~~ 453 (519)
...+|+|+.++++++++|...... +.+. +.++...+.+.. ++...+ .+..++. . ..+++.+ ++.
T Consensus 301 ~~~~g~dl~~~~~~~~~G~~~~~~~~~~~~~-~~a~~~~~~~~~~~~~~~p~~g---~i~~~~~-~-~~~~v~~~~~~~~ 374 (451)
T 2vpq_A 301 EMVTGIDLVKLQLQVAMGDVLPYKQEDIKLT-GHAIEFRINAENPYKNFMPSPG---KIEQYLA-P-GGYGVRIESACYT 374 (451)
T ss_dssp HHHHCCCHHHHHHHHHTTCCCSCCGGGCCCC-SEEEEEEEESEEGGGTTEECCS---BCSEEEC-C-CSTTEEEECCCCT
T ss_pred hHHhCCCHHHHHHHHHCCCCCCCcccccCcC-ceEeeeEeeeeccccccCCCCC---EEeEEEC-C-CCCCccccccccc
Confidence 445699999999999999864421 2233 344333322211 110111 1222221 0 0123333 122
Q ss_pred eeeecCCCcEEecCCeEEEEEEecCCHHHHHHHHHHHhhccccCCe-----eeccccccccccccccccC
Q 010065 454 GTALDADGNFIATGGRVLGVTAKGKDVEEAQDRAYLAVEEINWPGG-----FYRRDIGWRALPQKQFATR 518 (519)
Q Consensus 454 ~~~~~~~g~~~~~~~rvg~vi~~g~t~~ea~~~a~~~~~~i~~~g~-----~~r~dig~~~~~~~~~~~~ 518 (519)
|... .. ..++|+|+|++.|+|.++|+++++++++.++++|. |+|+.+..+.|.+.++.|+
T Consensus 375 g~~~---~~--~~~~~~g~v~~~g~~~~ea~~~~~~~~~~i~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 439 (451)
T 2vpq_A 375 NYTI---PP--YYDSMVAKLIIHEPTRDEAIMAGIRALSEFVVLGIDTTIPFHIKLLNNDIFRSGKFNTN 439 (451)
T ss_dssp TCBC---CT--TTCCEEEEEEEEESSHHHHHHHHHHHHHTCEEESSCCSHHHHHHHHTCHHHHHTCCCTT
T ss_pred CCcc---Cc--ccccccEEEEEEeCCHHHHHHHHHHHHhccEEeCcCCCHHHHHHHhCCHhhhcCCCccH
Confidence 2221 11 34569999999999999999999999999999984 4666666666666555543
No 30
>3aw8_A PURK, phosphoribosylaminoimidazole carboxylase, ATPase; structural genomics, riken structural genomics/proteomics in RSGI, ATP grAsp; HET: AMP; 2.60A {Thermus thermophilus}
Probab=100.00 E-value=9.9e-40 Score=335.20 Aligned_cols=357 Identities=21% Similarity=0.234 Sum_probs=264.6
Q ss_pred EEEEEeCChhHHHHHHHHHhcCCCcEEEEecCCCCC-cCCCCCccccCCCCCCHHHHHHHHHHcCCcEEEECCChhhHHH
Q 010065 84 VVLVIGGGGREHALCYALKRSHSCDAVFCAPGNAGI-SNSGDATCIPDLDVLDGDAVISFCRKWSVGLVVVGPEAPLVSG 162 (519)
Q Consensus 84 ~vliiG~g~~~~~l~~~l~~~~g~~~v~~~~~~~~~-~~~~~~~~v~~~d~~d~~~l~~~~~~~~id~Vi~g~E~~~~~~ 162 (519)
||||+|+|.....++.++++. |+++++++++.... ...+ +.+ ..+..|.+.+++++ .++|+|+++.|+.. ..
T Consensus 1 ~iliiG~g~~g~~~~~a~~~~-G~~v~~~~~~~~~~~~~~a--~~~-~~~~~d~~~l~~~~--~~~d~v~~~~e~~~-~~ 73 (369)
T 3aw8_A 1 MIGILGGGQLGRMLALAGYPL-GLSFRFLDPSPEACAGQVG--ELV-VGEFLDEGALLRFA--EGLALVTYEFENVP-VE 73 (369)
T ss_dssp CEEEECCSHHHHHHHHHHTTB-TCCEEEEESCTTCGGGGTS--EEE-ECCTTCHHHHHHHH--TTCSEEEECCTTCC-HH
T ss_pred CEEEECCCHHHHHHHHHHHHc-CCEEEEEeCCCCChHHHhh--ceE-ecCCCCHHHHHHHH--hCCCEEEECCCCcC-HH
Confidence 589999995445567777766 99999998763221 1122 223 56788899999988 68999999888765 45
Q ss_pred HHHHHHHCCCCeeCCcHHHHHHhcCHHHHHHHHHHcCCCCCCeeecCCHHHHHHHHHHhCCCEEEEeCCCC-CCCcEEEe
Q 010065 163 LANKLVKAGIPTFGPSSEAAALEGSKNFMKNLCDKYGIPTAKYKTFTDPNAAKQYIQEEGAPIVVKADGLA-AGKGVIVA 241 (519)
Q Consensus 163 ~a~~le~~gip~~g~~~~~~~~~~dK~~~k~~l~~~Gi~~p~~~~v~~~~~~~~~~~~~g~P~VvKP~~g~-gs~GV~~v 241 (519)
+++.++.+| ++|++++++.+++||..+|++|+++|||+|++..+++.+++.+++++++||+|+||..++ +|+||+++
T Consensus 74 ~~~~l~~~g--~~g~~~~~~~~~~dK~~~k~~l~~~gip~p~~~~~~~~~~~~~~~~~~g~P~vvKp~~~~~~g~Gv~~v 151 (369)
T 3aw8_A 74 AARRLEGRL--PLYPPAKALEVAQDRLREKTFFQGLGVPTPPFHPVDGPEDLEEGLKRVGLPALLKTRRGGYDGKGQALV 151 (369)
T ss_dssp HHHHHHHHS--CBSSCHHHHHHHTCHHHHHHHHHHHTCCCCCEEEESSHHHHHHHHTTTCSSEEEEECCC------EEEE
T ss_pred HHHHHHHcC--CcCCCHHHHHHhcCHHHHHHHHHHCCCCCCCceeeCCHHHHHHHHHHcCCCEEEEEcCCCCCcceEEEE
Confidence 667888899 459999999999999999999999999999999999999999888899999999999999 99999999
Q ss_pred CCHHHHHHHHHHHHhhccCCCCCCcEEEEeccC-CcEEEEEEEEeC-CeeEEeccccccccccCCCCCCCCCCceEEecC
Q 010065 242 MTLEEAYEAVDSMLLKNAFGSAGCRVIIEEFLE-GEEASFFALVDG-ENAIPLESAQDHKRVGDGDTGPNTGGMGAYSPA 319 (519)
Q Consensus 242 ~~~~el~~a~~~~~~~~~~~~~~~~~lvEe~I~-G~E~sv~~l~dg-~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~P~ 319 (519)
++.+|+.++++.+ .+..++|||||+ |+|+++.+++|+ +.+..++....+++...+ ..++.|+
T Consensus 152 ~~~~el~~~~~~~--------~~~~~lvEe~i~~g~e~sv~~~~d~~G~~~~~~~~~~~~~~~~~--------~~~~~p~ 215 (369)
T 3aw8_A 152 RTEEEALEALKAL--------GGRGLILEGFVPFDREVSLLAVRGRTGEVAFYPLVENRHWGGIL--------RLSLAPA 215 (369)
T ss_dssp CSHHHHHHHHTTT--------CSSSEEEEECCCCSEEEEEEEEECTTSCEEECCCEEEEEETTEE--------EEEEESC
T ss_pred CCHHHHHHHHHhc--------CCCcEEEEEcCCCCEEEEEEEEECCCCCEEEECCeeeeeeCCEE--------EEEECCC
Confidence 9999999888765 247899999999 899999999864 345545443332211110 1357788
Q ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHcCCCeeeEEEEEEEEEcCCCceEEEEEeCCCCCCchHHHHHHhCCCHHHHHHHHH
Q 010065 320 PVLTKELQSVVMESIILPTVKGMSAEGCKFVGVLYAGLMIEKKSGLPKLIEYNVRFGDPECQVLMVRLESDLAEVLLAAC 399 (519)
Q Consensus 320 ~~l~~~~~~~i~~~a~~~~~~~~~a~g~~~~G~~~vdf~~~~~g~~~~viEiN~R~G~~~~~~~~~~~G~d~~~~~i~~~ 399 (519)
+.++++..+++.+.+ .+++.++|+. |++++||++++ + ++|++|+|||+|++.++.. ..+|.|+++.+++.+
T Consensus 216 ~~l~~~~~~~~~~~a----~~~~~~lg~~--G~~~vd~~~~~-~-~~~viEiN~R~~~~~~~~~-~~~g~~~~~~~~~~~ 286 (369)
T 3aw8_A 216 PGASEALQKKAEAYA----LRAMEALDYV--GVLALEFFQVG-E-ELLFNEMAPRVHNSGHWTI-EGAETSQFENHLRAV 286 (369)
T ss_dssp TTCCHHHHHHHHHHH----HHHHHHHTCC--EEEEEEEEEET-T-EEEEEEEESSCCGGGTTHH-HHBSSCHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHH----HHHHHHCCCe--eEEEEEEEEEC-C-cEEEEEEeCCcCCccceee-eeecCCHHHHHHHHH
Confidence 767888888887765 4677888875 99999999998 4 5999999999998877543 457999999999999
Q ss_pred hCCCCCCCcccCCCcEEEEEEecCCCCCCCCCCcccccchhhhccCCCeEEEEeeeeecCCCcEEecCCeEEEEEEecCC
Q 010065 400 RGELTGVTLNWSPGSAMVVVMASKGYPGSYEKGSEIQNLEEAEQVAPSVKIFHAGTALDADGNFIATGGRVLGVTAKGKD 479 (519)
Q Consensus 400 ~g~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~rvg~vi~~g~t 479 (519)
+|...+...... .+++.++++.. + .+ +.+.. .+++.+..++. ..+.+.++|+|++.|+|
T Consensus 287 ~g~~l~~~~~~~-~~~~~~~~~~~--~-------~~---~~~~~-~p~~~~~~~g~-------~~~~~~~lg~v~~~g~~ 345 (369)
T 3aw8_A 287 LGLPLGSTAPRG-QSAMVNLIGEK--P-------PF---AEVLK-VEGAHLHWYGK-------AVRPGRKVGHITLRRDG 345 (369)
T ss_dssp HTCCCCCCCBCS-EEEEEEEESCC--C-------CH---HHHHT-STTEEEEECCC-------CCCTTCEEEEEEEEESS
T ss_pred cCCCCCCccccc-cEEEEEEeCCC--c-------hH---HHhcc-CCCcEEEEecC-------CCCCCCeEEEEEEEcCC
Confidence 987432211122 24444444432 1 12 22222 24443333221 23455778899999999
Q ss_pred HHHHHHHHHHHhhccc
Q 010065 480 VEEAQDRAYLAVEEIN 495 (519)
Q Consensus 480 ~~ea~~~a~~~~~~i~ 495 (519)
.++|+++++++++.|+
T Consensus 346 ~~ea~~~~~~~~~~i~ 361 (369)
T 3aw8_A 346 LKALEEGLARLSRLVS 361 (369)
T ss_dssp HHHHHHHHHHHHTTSS
T ss_pred HHHHHHHHHHHHHHhh
Confidence 9999999999999987
No 31
>2dzd_A Pyruvate carboxylase; biotin carboxylase, ligase; 2.40A {Geobacillus thermodenitrificans}
Probab=100.00 E-value=2e-40 Score=350.28 Aligned_cols=395 Identities=18% Similarity=0.198 Sum_probs=276.2
Q ss_pred ccEEEEEeCChhHHHHHHHHHhcCCCcEEEEecCCCC--C-cCCCCCc-ccc----CC-CCCCHHHHHHHHHHcCCcEEE
Q 010065 82 RVVVLVIGGGGREHALCYALKRSHSCDAVFCAPGNAG--I-SNSGDAT-CIP----DL-DVLDGDAVISFCRKWSVGLVV 152 (519)
Q Consensus 82 ~~~vliiG~g~~~~~l~~~l~~~~g~~~v~~~~~~~~--~-~~~~~~~-~v~----~~-d~~d~~~l~~~~~~~~id~Vi 152 (519)
+++|||+|+|.....+++++++. |++++.++++... . ...++.. .+. .. +..|.+.++++++++++|+|+
T Consensus 6 ~k~ILI~g~g~~~~~i~~a~~~~-G~~vv~v~~~~~~~~~~~~~ad~~~~i~~~~~~~~~y~d~~~l~~~~~~~~id~v~ 84 (461)
T 2dzd_A 6 IRKVLVANRGEIAIRVFRACTEL-GIRTVAIYSKEDVGSYHRYKADEAYLVGEGKKPIEAYLDIEGIIEIAKAHDVDAIH 84 (461)
T ss_dssp CSEEEECSCHHHHHHHHHHHHHH-TCEEEEEECGGGTTCTHHHHSSSEEECSTTSCTTGGGTCHHHHHHHHHHTTCCEEE
T ss_pred CcEEEEECCcHHHHHHHHHHHHc-CCEEEEEECCcccccchhhhCCEEEEcCCCCCccccccCHHHHHHHHHHhCCCEEE
Confidence 46899999987667788888876 9999988754211 1 1111111 110 01 125689999999999999999
Q ss_pred ECC----ChhhHHHHHHHHHHCCCCeeCCcHHHHHHhcCHHHHHHHHHHcCCCCCCee--ecCCHHHHHHHHHHhCCCEE
Q 010065 153 VGP----EAPLVSGLANKLVKAGIPTFGPSSEAAALEGSKNFMKNLCDKYGIPTAKYK--TFTDPNAAKQYIQEEGAPIV 226 (519)
Q Consensus 153 ~g~----E~~~~~~~a~~le~~gip~~g~~~~~~~~~~dK~~~k~~l~~~Gi~~p~~~--~v~~~~~~~~~~~~~g~P~V 226 (519)
++. |.. .+++.++.+|+|++|++++++.+++||..++++++++|||+|++. .+++.+++.+++++++||+|
T Consensus 85 ~~~g~~~E~~---~~~~~~~~~gi~~~g~~~~~~~~~~dK~~~k~~l~~~Gip~p~~~~~~~~~~~~~~~~~~~~g~Pvv 161 (461)
T 2dzd_A 85 PGYGFLSENI---QFAKRCREEGIIFIGPNENHLDMFGDKVKARHAAVNAGIPVIPGSDGPVDGLEDVVAFAEAHGYPII 161 (461)
T ss_dssp CCSSSSTTCH---HHHHHHHHTTCEESSCCHHHHHHTTSHHHHHHHHHHTTCCBCCBCSSCCSSHHHHHHHHHHHCSCEE
T ss_pred ECCCccccCH---HHHHHHHHcCCEEECCCHHHHHHhhCHHHHHHHHHHcCCCCCCCcccCcCCHHHHHHHHHhcCCcEE
Confidence 964 554 467779999999999999999999999999999999999999997 78899999999999999999
Q ss_pred EEeCCCCCCCcEEEeCCHHHHHHHHHHHHhh--ccCCCCCCcEEEEeccCC-cEEEEEEEEeC-CeeEEecccccccccc
Q 010065 227 VKADGLAAGKGVIVAMTLEEAYEAVDSMLLK--NAFGSAGCRVIIEEFLEG-EEASFFALVDG-ENAIPLESAQDHKRVG 302 (519)
Q Consensus 227 vKP~~g~gs~GV~~v~~~~el~~a~~~~~~~--~~~~~~~~~~lvEe~I~G-~E~sv~~l~dg-~~~~~~~~~~~~~~~~ 302 (519)
+||..++||+||+++++.+|+.++++.+... ..++ +..++|||||+| +|+++.++.++ +.++.+..... ...
T Consensus 162 vKp~~g~gg~Gv~~v~~~~el~~~~~~~~~~~~~~~~--~~~~lvEe~i~g~~e~~v~v~~~~~G~~~~~~~~~~--~~~ 237 (461)
T 2dzd_A 162 IKAALGGGGRGMRIVRSKSEVKEAFERAKSEAKAAFG--SDEVYVEKLIENPKHIEVQILGDYEGNIVHLYERDC--SVQ 237 (461)
T ss_dssp EEESTTCSSSSEEEECCGGGHHHHHHHHHHHHHHHTS--CCCEEEEECCCSCEEEEEEEEECTTCCEEEEEEEEE--EEE
T ss_pred EEeCCCCCCCCEEEeCCHHHHHHHHHHHHHHHHhhcC--CCcEEEEECCCCCeEEEEEEEEcCCCCEEEEEeccc--ccc
Confidence 9999999999999999999999999877542 1222 368999999999 89999999864 23332221100 000
Q ss_pred CCCCCCCCCCceEEecCCCCCHHHHHHHHHHHHHHHHHHHHHcCCCeeeEEEEEEEEEcCCCceEEEEEeCCCCCCchHH
Q 010065 303 DGDTGPNTGGMGAYSPAPVLTKELQSVVMESIILPTVKGMSAEGCKFVGVLYAGLMIEKKSGLPKLIEYNVRFGDPECQV 382 (519)
Q Consensus 303 ~~~~~~~~g~~~~~~P~~~l~~~~~~~i~~~a~~~~~~~~~a~g~~~~G~~~vdf~~~~~g~~~~viEiN~R~G~~~~~~ 382 (519)
... .....+.|+..++++..+++.+.+ .++++++|+. |.+++||+++++ ++||+|+|||++++.. .
T Consensus 238 ~~~-----~~~~~~~P~~~l~~~~~~~i~~~a----~~~~~~lg~~--g~~~ve~~~~~~--~~~viEiN~R~~~~~~-~ 303 (461)
T 2dzd_A 238 RRH-----QKVVEVAPSVSLSDELRQRICEAA----VQLMRSVGYV--NAGTVEFLVSGD--EFYFIEVNPRIQVEHT-I 303 (461)
T ss_dssp ETT-----EEEEEEESCTTSCHHHHHHHHHHH----HHHHHHTTCC--EEEEEEEEEETT--EEEEEEEESSCCGGGH-H
T ss_pred ccc-----cceEEECCcccCCHHHHHHHHHHH----HHHHHHcCCC--cceEEEEEEeCC--CEEEEEEECCCCCcee-e
Confidence 000 012345687558888888887765 4688889977 999999999984 5999999999987543 2
Q ss_pred HHHHhCCCHHHHHHHHHhCC-CCCCCccc-------CCCcEEEEEEecCCCCC--C-CCCCcccccchhhhccCCCeEEE
Q 010065 383 LMVRLESDLAEVLLAACRGE-LTGVTLNW-------SPGSAMVVVMASKGYPG--S-YEKGSEIQNLEEAEQVAPSVKIF 451 (519)
Q Consensus 383 ~~~~~G~d~~~~~i~~~~g~-~~~~~~~~-------~~~~a~~~~l~~~~~~~--~-~~~~~~i~~~~~~~~~~~~~~~~ 451 (519)
+...+|+|+.++++++++|. +....+.+ .+++++.+.+.... |. . +..+ .+..+... ..+++.+.
T Consensus 304 ~~~~~g~dl~~~~~~~~~G~~l~~~~~~~~~~~~~~~~g~~~~~ri~~~~-~~~~~~p~~g-~i~~~~~~--~~~~v~~~ 379 (461)
T 2dzd_A 304 TEMITGIDIVQSQILIADGCSLHSHEVGIPKQEDIRINGYAIQSRVTTED-PLNNFMPDTG-KIMAYRSG--GGFGVRLD 379 (461)
T ss_dssp HHHHHCCCHHHHHHHHHTTCCTTSTTTCCCCGGGCCCCSEEEEEEEESEE-GGGTTEECCE-ECSEEECC--CCTTEEEE
T ss_pred EEeecCCCHHHHHHHHHcCCCccccccccccccccccceeEEEeeecccC-CccCccCCCC-eeeEEecC--CCCCeEee
Confidence 33346999999999999995 33322112 23555544332210 00 0 0000 01110000 00112221
Q ss_pred EeeeeecCCCcEEe--cCCeEEEEEEecCCHHHHHHHHHHHhhccccCCeeecccccc
Q 010065 452 HAGTALDADGNFIA--TGGRVLGVTAKGKDVEEAQDRAYLAVEEINWPGGFYRRDIGW 507 (519)
Q Consensus 452 ~~~~~~~~~g~~~~--~~~rvg~vi~~g~t~~ea~~~a~~~~~~i~~~g~~~r~dig~ 507 (519)
+... ..|...+ .++++++|++.|+|.++|+++++++++.|+++|. |+|||.
T Consensus 380 --~~~~-~~G~~i~~~~~~~~~~v~~~g~~~~~a~~~~~~~~~~i~~~g~--~~~i~~ 432 (461)
T 2dzd_A 380 --AGNG-FQGAVITPYYDSLLVKLSTWALTFEQAARKMLRNLREFRIRGI--KTNIPF 432 (461)
T ss_dssp --ESSC-STTCEECSSSCCEEEEEEEEESSHHHHHHHHHHHHHTCEEESS--CCSHHH
T ss_pred --cccc-cCCCCcCcccchhhheeEEEcCCHHHHHHHHHHHHHhcEEeCC--cCCHHH
Confidence 0000 1222211 3456999999999999999999999999999998 999994
No 32
>2pvp_A D-alanine-D-alanine ligase; 2.40A {Helicobacter pylori}
Probab=100.00 E-value=1e-42 Score=355.76 Aligned_cols=299 Identities=18% Similarity=0.110 Sum_probs=233.3
Q ss_pred ccceeEEEeeccCCCCCcccccCCCCCCCccEEEEEeCChhHHHHHHHHHhcCCCcEEEEecCCCCCcCCCCCccccCCC
Q 010065 53 KSSFFSTVKCLAQKSQPSVSVNAPTNAGQRVVVLVIGGGGREHALCYALKRSHSCDAVFCAPGNAGISNSGDATCIPDLD 132 (519)
Q Consensus 53 ~~~~~i~v~~GG~s~e~~vS~~s~~~~~~~~~vliiG~g~~~~~l~~~l~~~~g~~~v~~~~~~~~~~~~~~~~~v~~~d 132 (519)
+.+|||+|||||.|+||+||+.||.+ +..+|. |++++.++.+..+.+......
T Consensus 18 ~~~~~v~vl~gG~s~E~~vSl~S~~~------------------v~~al~---g~~v~~i~~~~~~~~~~~~~~------ 70 (367)
T 2pvp_A 18 GSHMEFCVLFGGASFEHEISIVSAIA------------------LKGVLK---DRIKYFIFLDENHHFYLIEES------ 70 (367)
T ss_dssp --CCCEEEEEECSSTTHHHHHHHHHH------------------HHHHHG---GGEEEEEEECTTCCEEECCGG------
T ss_pred ccCCEEEEEECCCCcchhhhHHHHHH------------------HHHHhC---CCeEEEEEECCCCCEEecccc------
Confidence 45689999999999999999999865 577775 788888765433222110000
Q ss_pred CCCHHHHH---------------HHHH-----Hc--CCcEEEEC-----CChhhHHHHHHHHHHCCCCeeCCcHHHHHHh
Q 010065 133 VLDGDAVI---------------SFCR-----KW--SVGLVVVG-----PEAPLVSGLANKLVKAGIPTFGPSSEAAALE 185 (519)
Q Consensus 133 ~~d~~~l~---------------~~~~-----~~--~id~Vi~g-----~E~~~~~~~a~~le~~gip~~g~~~~~~~~~ 185 (519)
..+...+. .+.. .. ++|+||+. +|++.+++ .++.+|+|++|+++.++.++
T Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~v~~~lhg~~gedg~i~~---~le~~gip~~G~~~~a~~~~ 147 (367)
T 2pvp_A 71 NMHSKYFAQIKEKKLPPLILTHNGLLKNSFLGAKIIELPLVINLVHGGDGEDGKLAS---LLEFYRIAFIGPRIEASVLS 147 (367)
T ss_dssp GCSHHHHHTGGGSCCCCBEEETTEEEEEETTEEEEEECCSEEECCCSTTTTSSHHHH---HHHHTTCCEESCCHHHHHHH
T ss_pred ccchhhhccccccccccccccCcceeccccccccccCCCEEEEcCCCCCccHHHHHH---HHHHcCCCccCCCHHHHHHH
Confidence 00111110 0110 22 68999993 67876544 49999999999999999999
Q ss_pred cCHHHHHHHHHHcCCCCCCeeecCCHH--HHHHHHHHhCCCEEEEeCCCCCCCcEEEeCCHHHHHHHHHHHHhhccCCCC
Q 010065 186 GSKNFMKNLCDKYGIPTAKYKTFTDPN--AAKQYIQEEGAPIVVKADGLAAGKGVIVAMTLEEAYEAVDSMLLKNAFGSA 263 (519)
Q Consensus 186 ~dK~~~k~~l~~~Gi~~p~~~~v~~~~--~~~~~~~~~g~P~VvKP~~g~gs~GV~~v~~~~el~~a~~~~~~~~~~~~~ 263 (519)
+||..++++|+++|||+|++..+.+.+ ++.+ .+.++||+||||..++||.||.++++.+||.++++.++. .
T Consensus 148 ~DK~~~k~~l~~~Gip~p~~~~~~~~~~~~~~~-~~~lg~PvvVKP~~g~ss~Gv~~v~~~~el~~a~~~~~~------~ 220 (367)
T 2pvp_A 148 YNKYLTKLYAKDLGIKTLDYVLLNEKNRANALD-LMNFNFPFIVKPSNAGSSLGVNVVKEEKELIYALDSAFE------Y 220 (367)
T ss_dssp HSHHHHHHHHHHHTCBCCCCEEECTTTGGGHHH-HCCSCSCEEEEESSCCTTTTCEEESSTTSHHHHHHHHTT------T
T ss_pred cCHHHHHHHHHHCCcCCCCEEEEeCCchHHHHH-HhccCCCEEEEECCCCCCCCEEEECCHHHHHHHHHHHHh------c
Confidence 999999999999999999999998776 5555 667899999999999999999999999999999998863 4
Q ss_pred CCcEEEEeccCC-cEEE-EEEEEeCCeeEEeccccccccccCCCCCCCCCCceEEecCCCCCHHHHHHHHHHHHHHHHHH
Q 010065 264 GCRVIIEEFLEG-EEAS-FFALVDGENAIPLESAQDHKRVGDGDTGPNTGGMGAYSPAPVLTKELQSVVMESIILPTVKG 341 (519)
Q Consensus 264 ~~~~lvEe~I~G-~E~s-v~~l~dg~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~P~~~l~~~~~~~i~~~a~~~~~~~ 341 (519)
+..+|||+||+| +||+ +.+.++|+.+...........+++++.+|+.|++..++|++ ++++..+++++.+ .++
T Consensus 221 ~~~vlVEe~I~G~~E~svi~v~v~g~~~~~~~ei~~~~~~~d~~~ky~~g~~~~~~Pa~-l~~~~~~~i~~~a----~~~ 295 (367)
T 2pvp_A 221 SKEVLIEPFIQGVKEYNLAGCKIKKDFCFSYIEEPNKQEFLDFKQKYLDFSRNKAPKAS-LSNALEEQLKENF----KKL 295 (367)
T ss_dssp CSCEEEEECCTTCEEEEEEEEEETTEEEEEEEEETTTTEEECCCCSSCCSCCCSCCCCC-CCHHHHHHHHHHH----HHH
T ss_pred CCcEEEEeCCCCCceeeEEEEEECCEEEEEEEEEecCCceEcccccccCCCeeEEecCC-CCHHHHHHHHHHH----HHH
Confidence 679999999999 9976 44444554333222333334688999999988888889998 9999888888876 468
Q ss_pred HHHcCCCeeeEEEEEEEEEcCCCceEEEEEeCCCCCCchHHHHHHhCCCHHHHHHHHHhCC
Q 010065 342 MSAEGCKFVGVLYAGLMIEKKSGLPKLIEYNVRFGDPECQVLMVRLESDLAEVLLAACRGE 402 (519)
Q Consensus 342 ~~a~g~~~~G~~~vdf~~~~~g~~~~viEiN~R~G~~~~~~~~~~~G~d~~~~~i~~~~g~ 402 (519)
++++|+. |++|+||+++ +| ++||+|||||||++.+ ++++ |+.+++.+++.+.
T Consensus 296 ~~aLg~~--G~~~vDf~~~-~g-~~~vlEiN~rpg~t~~-s~~p----~~~~l~~~li~~~ 347 (367)
T 2pvp_A 296 YSDLFDG--AIIRCDFFVI-EN-EVYLNEINPIPGSLAN-YLFD----DFKTTLENLAQSL 347 (367)
T ss_dssp HTTTSTT--CCEEEEEEEE-TT-EEEEEEEESSCGGGGG-GGSS----SHHHHHHHHHHHC
T ss_pred HHHcCCC--CEEEEEEEEE-CC-eEEEEEEeCCCCCCcc-cccC----CHHHHHHHHHhCc
Confidence 8999986 9999999999 55 6999999999999776 6666 9999999999885
No 33
>2fb9_A D-alanine:D-alanine ligase; 1.90A {Thermus caldophilus} PDB: 2zdh_A* 2yzg_A 2yzn_A* 2yzm_A* 2zdg_A* 2zdq_A*
Probab=100.00 E-value=5.3e-42 Score=345.31 Aligned_cols=295 Identities=16% Similarity=0.107 Sum_probs=226.8
Q ss_pred ceeEEEeeccCCCCCcccccCCCCCCCccEEEEEeCChhHHHHHHHHHhcCCCcEEEEecCCCCCcC--------CCCCc
Q 010065 55 SFFSTVKCLAQKSQPSVSVNAPTNAGQRVVVLVIGGGGREHALCYALKRSHSCDAVFCAPGNAGISN--------SGDAT 126 (519)
Q Consensus 55 ~~~i~v~~GG~s~e~~vS~~s~~~~~~~~~vliiG~g~~~~~l~~~l~~~~g~~~v~~~~~~~~~~~--------~~~~~ 126 (519)
+|||+||+||.|+||+||+.||++ +..+|.+ +++.++.+..+.+. ..+..
T Consensus 3 ~~~v~vl~gg~s~E~~vSl~s~~~------------------v~~al~~----~v~~i~~~~~~~~~~~~~~~~~~~~~~ 60 (322)
T 2fb9_A 3 FMRVLLIAGGVSPEHEVSLLSAEG------------------VLRHIPF----PTDLAVIAQDGRWLLGEKALTALEAKA 60 (322)
T ss_dssp CCCEEEEEECSSTTHHHHHHHHHH------------------HHHHCSS----CEEEEEECTTSCEECHHHHHHHTTSSC
T ss_pred CcEEEEEeCCCchhHHHHHHHHHH------------------HHHHhcc----CeEEEEEcCCCCEEecccchhhhcccc
Confidence 689999999999999999999876 5666643 45444432211111 10000
Q ss_pred -ccc-CCCCCCHHHHHHHHHHcCCcEEEEC-----CChhhHHHHHHHHHHCCCCeeCCcHHHHHHhcCHHHHHHHHHHcC
Q 010065 127 -CIP-DLDVLDGDAVISFCRKWSVGLVVVG-----PEAPLVSGLANKLVKAGIPTFGPSSEAAALEGSKNFMKNLCDKYG 199 (519)
Q Consensus 127 -~v~-~~d~~d~~~l~~~~~~~~id~Vi~g-----~E~~~~~~~a~~le~~gip~~g~~~~~~~~~~dK~~~k~~l~~~G 199 (519)
.+. ..++.. + +..++|+|||. +|++.++++ ++.+|+|++|+++.++.+++||..++++|+++|
T Consensus 61 ~~~~~~~~~~~---~----~~~~~D~v~~~~hg~~gedg~i~~~---le~~gip~~g~~~~~~~~~~dK~~~k~~l~~~G 130 (322)
T 2fb9_A 61 APEGEHPFPPP---L----SWERYDVVFPLLHGRFGEDGTVQGF---LELLGKPYVGAGVAASALCMDKDLSKRVLAQAG 130 (322)
T ss_dssp CCCCCBCSSCC---C----CCTTCSEEEEECCSTTTTSSHHHHH---HHHHTCCBSSCCHHHHHHHHCHHHHHHHHHHTT
T ss_pred ccceecccccc---c----cccCCCEEEEeCCCCCCccHHHHHH---HHHcCCCeeCcCHHHHHHHcCHHHHHHHHHHCC
Confidence 010 000110 1 14579999992 578765554 899999999999999999999999999999999
Q ss_pred CCCCCeeecCCHHHHHHHHHHhCCCEEEEeCCCCCCCcEEEeCCHHHHHHHHHHHHhhccCCCCCCcEEEEeccCC-cEE
Q 010065 200 IPTAKYKTFTDPNAAKQYIQEEGAPIVVKADGLAAGKGVIVAMTLEEAYEAVDSMLLKNAFGSAGCRVIIEEFLEG-EEA 278 (519)
Q Consensus 200 i~~p~~~~v~~~~~~~~~~~~~g~P~VvKP~~g~gs~GV~~v~~~~el~~a~~~~~~~~~~~~~~~~~lvEe~I~G-~E~ 278 (519)
||+|++..+.+.++. .. +++||+||||..+++|.||.++++.+|+.++++.++. .+..+|||+||+| +|+
T Consensus 131 ip~p~~~~~~~~~~~--~~-~~g~PvvvKP~~g~~s~Gv~~v~~~~el~~a~~~~~~------~~~~vlvEe~I~G~~E~ 201 (322)
T 2fb9_A 131 VPVVPWVAVRKGEPP--VV-PFDPPFFVKPANTGSSVGISRVERFQDLEAALALAFR------YDEKAVVEKALSPVREL 201 (322)
T ss_dssp CCCCCEEEEETTSCC--CC-CSCSCEEEEETTCCTTTTCEEESSHHHHHHHHHHHTT------TCSEEEEEECCSSCEEE
T ss_pred CCCCCEEEEECchhh--hh-ccCCCEEEEeCCCCCCCCEEEECCHHHHHHHHHHHHh------cCCeEEEEeCCCCCeeE
Confidence 999999998776541 22 6899999999999999999999999999999998863 4679999999999 999
Q ss_pred EEEEEEeCC-eeEEeccccccccccCCCCCCCCCCceEEecCCCCCHHHHHHHHHHHHHHHHHHHHHcCCCeeeEEEEEE
Q 010065 279 SFFALVDGE-NAIPLESAQDHKRVGDGDTGPNTGGMGAYSPAPVLTKELQSVVMESIILPTVKGMSAEGCKFVGVLYAGL 357 (519)
Q Consensus 279 sv~~l~dg~-~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~P~~~l~~~~~~~i~~~a~~~~~~~~~a~g~~~~G~~~vdf 357 (519)
++.++.+++ .+.+.........++++..+|+.|.+.+++|++ ++++..+++++.+ .++++++|+. |++|+||
T Consensus 202 ~v~vl~~~~~~~~~~~ei~~~~~~~~~~~k~~~g~~~~~~Pa~-l~~~~~~~i~~~a----~~~~~alg~~--G~~~vD~ 274 (322)
T 2fb9_A 202 EVGVLGNVFGEASPVGEVRYEAPFYDYETKYTPGRAELLIPAP-LDPGTQETVQELA----LKAYKVLGVR--GMARVDF 274 (322)
T ss_dssp EEEEESSSSCEEEEEEEEEEECCEEETTTEEECCEEEEESSCC-CCTTHHHHHHHHH----HHHHHHHTCC--SEEEEEE
T ss_pred EEEEEeCCCceEeeeEEEeeCCCccCHHHcccCCCeEEEeCCC-CCHHHHHHHHHHH----HHHHHHhCCc--eEEEEEE
Confidence 999996543 233333333223577888888877777889998 8998888888876 4688899987 9999999
Q ss_pred EEEcCCCceEEEEEeCCCCCCchHHHH----HHhCCCHHHHHHHHHh
Q 010065 358 MIEKKSGLPKLIEYNVRFGDPECQVLM----VRLESDLAEVLLAACR 400 (519)
Q Consensus 358 ~~~~~g~~~~viEiN~R~G~~~~~~~~----~~~G~d~~~~~i~~~~ 400 (519)
+++ +| ++|++|||+|||++.+ +++ ..+|+|+.+++.+++.
T Consensus 275 ~~~-~g-~~~vlEiN~rpg~t~~-s~~p~~~~~~G~~~~~l~~~li~ 318 (322)
T 2fb9_A 275 FLA-EG-ELYLNELNTIPGFTPT-SMYPRLFEAGGVAYPELLRRLVE 318 (322)
T ss_dssp EEE-TT-EEEEEEEESSCCCSSS-CHHHHHHHHTTCCHHHHHHHHHH
T ss_pred EEE-CC-cEEEEEEECCCCCCcc-cHHHHHHHHhCCCHHHHHHHHHH
Confidence 999 66 7999999999999876 444 3459999999887754
No 34
>1e4e_A Vancomycin/teicoplanin A-type resistance protein; ligase, cell WALL, antibiotic resistance, membrane, peptidog synthesis; HET: ADP PHY; 2.5A {Enterococcus faecium} SCOP: c.30.1.2 d.142.1.1 PDB: 1e4e_B*
Probab=100.00 E-value=1.6e-42 Score=352.36 Aligned_cols=306 Identities=15% Similarity=0.139 Sum_probs=235.2
Q ss_pred ceeEEEeeccCCCCCcccccCCCCCCCccEEEEEeCChhHHHHHHHHHhcCCCcEEEEecCCCCCcCCCC-----C----
Q 010065 55 SFFSTVKCLAQKSQPSVSVNAPTNAGQRVVVLVIGGGGREHALCYALKRSHSCDAVFCAPGNAGISNSGD-----A---- 125 (519)
Q Consensus 55 ~~~i~v~~GG~s~e~~vS~~s~~~~~~~~~vliiG~g~~~~~l~~~l~~~~g~~~v~~~~~~~~~~~~~~-----~---- 125 (519)
+|||+||+||.|+||+||+.||.+ ++.+|++. |++++.++.+..+.+...+ .
T Consensus 3 ~~~v~vl~gG~s~E~~vs~~s~~~------------------v~~al~~~-g~~v~~i~~~~~~~~~~~~~~~~~~~~~~ 63 (343)
T 1e4e_A 3 RIKVAILFGGCSEEHDVSVKSAIE------------------IAANINKE-KYEPLYIGITKSGVWKMCEKPCAEWENEN 63 (343)
T ss_dssp CEEEEEEEECSSTTHHHHHHHHHH------------------HHHHSCTT-TEEEEEEEECTTSCEEEESCCCTTCCCTT
T ss_pred CcEEEEEeCCCCCCcchhHHHHHH------------------HHHHhhhc-CCEEEEEEEcCCCCEEecccchhhccccc
Confidence 689999999999999999999765 67787765 8998888654322221100 0
Q ss_pred -ccccCCCCC-CHHH-H-HHH--HHHcCCcEEEEC-----CChhhHHHHHHHHHHCCCCeeCCcHHHHHHhcCHHHHHHH
Q 010065 126 -TCIPDLDVL-DGDA-V-ISF--CRKWSVGLVVVG-----PEAPLVSGLANKLVKAGIPTFGPSSEAAALEGSKNFMKNL 194 (519)
Q Consensus 126 -~~v~~~d~~-d~~~-l-~~~--~~~~~id~Vi~g-----~E~~~~~~~a~~le~~gip~~g~~~~~~~~~~dK~~~k~~ 194 (519)
+.+ .+.+. +... + ... .+..++|+||+. +|++.++++ ++.+|+|++|+++.++.+++||..++++
T Consensus 64 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~D~v~~~~~g~~ged~~~~~~---le~~gip~~g~~~~~~~~~~dK~~~k~~ 139 (343)
T 1e4e_A 64 CYSA-VLSPDKKMHGLLVKKNHEYEINHVDVAFSALHGKSGEDGSIQGL---FELSGIPFVGCDIQSSAICMDKSLTYIV 139 (343)
T ss_dssp CEEE-EECSCTTTCEEEEEETTEEEEEECSEEEECCCSTTTTSSHHHHH---HHHHTCCBSSCCHHHHHHHHSHHHHHHH
T ss_pred ccce-ecccccccccceeecccccccccCCEEEEeCCCCCCcCHHHHHH---HHHcCCCccCCCHHHHHHHhCHHHHHHH
Confidence 001 00110 0000 1 000 123579999993 578765554 8999999999999999999999999999
Q ss_pred HHHcCCCCCCeeecCCHHHHHHHHHHhCCCEEEEeCCCCCCCcEEEeCCHHHHHHHHHHHHhhccCCCCCCcEEEEeccC
Q 010065 195 CDKYGIPTAKYKTFTDPNAAKQYIQEEGAPIVVKADGLAAGKGVIVAMTLEEAYEAVDSMLLKNAFGSAGCRVIIEEFLE 274 (519)
Q Consensus 195 l~~~Gi~~p~~~~v~~~~~~~~~~~~~g~P~VvKP~~g~gs~GV~~v~~~~el~~a~~~~~~~~~~~~~~~~~lvEe~I~ 274 (519)
|+++|||+|++..+.+.+++.. ++++||+||||..++||.||.++++.+|+.++++.++. .+..+|||+||+
T Consensus 140 l~~~Gip~p~~~~~~~~~~~~~--~~~~~PvvvKP~~~~~s~Gv~~v~~~~el~~a~~~~~~------~~~~~lvEe~I~ 211 (343)
T 1e4e_A 140 AKNAGIATPAFWVINKDDRPVA--ATFTYPVFVKPARSGSSFGVKKVNSADELDYAIESARQ------YDSKILIEQAVS 211 (343)
T ss_dssp HHHTTCBCCCEEEECTTCCCCG--GGSCSCEEEEESSCCTTTTCEEECSGGGHHHHHHHHTT------TCSSEEEEECCC
T ss_pred HHHCCCCcCCEEEEechhhhhh--hccCCCEEEEeCCCCCCCCEEEeCCHHHHHHHHHHHHh------cCCcEEEEeCcC
Confidence 9999999999999887765432 57899999999999999999999999999999998753 457899999999
Q ss_pred CcEEEEEEEEeCCeeEEecc--ccccccccCCCCCCC----CCCceEEecCCCCCHHHHHHHHHHHHHHHHHHHHHcCCC
Q 010065 275 GEEASFFALVDGENAIPLES--AQDHKRVGDGDTGPN----TGGMGAYSPAPVLTKELQSVVMESIILPTVKGMSAEGCK 348 (519)
Q Consensus 275 G~E~sv~~l~dg~~~~~~~~--~~~~~~~~~~~~~~~----~g~~~~~~P~~~l~~~~~~~i~~~a~~~~~~~~~a~g~~ 348 (519)
|+|++|.++.+++.+..++. ......+++++.+|+ .|++..++|+. ++++..+++++.+ .++++++|+.
T Consensus 212 G~E~~v~vl~~~~~~~~~~~~ei~~~~~~~~~~~k~~~~~~~g~~~~~~p~~-l~~~~~~~i~~~a----~~~~~alg~~ 286 (343)
T 1e4e_A 212 GCEVGCAVLGNSAALVVGEVDQIRLQYGIFRIHQEVEPEKGSENAVITVPAD-LSAEERGRIQETV----KKIYKTLGCR 286 (343)
T ss_dssp SEEEEEEEEEETTCCEECCCEEEEESSSCCCGGGSSSGGGCCSSEEECSSCS-SCHHHHHHHHHHH----HHHHHHTTCE
T ss_pred CeEEEEEEEeCCCCeEEeeeEEEeeCCCccCHhhcccccCCCCCeeEEeCCC-CCHHHHHHHHHHH----HHHHHHcCCc
Confidence 99999999987543333322 222235788888887 67777788998 8998888888876 4688899976
Q ss_pred eeeEEEEEEEEEcCCCceEEEEEeCCCCCCchHHHH----HHhCCCHHHHHHHHHh
Q 010065 349 FVGVLYAGLMIEKKSGLPKLIEYNVRFGDPECQVLM----VRLESDLAEVLLAACR 400 (519)
Q Consensus 349 ~~G~~~vdf~~~~~g~~~~viEiN~R~G~~~~~~~~----~~~G~d~~~~~i~~~~ 400 (519)
|++|+||+++++| ++|++|||+|||++.+ +++ ..+|+|+.+++.+++.
T Consensus 287 --G~~~vD~~~~~~g-~~~viEiN~rpg~t~~-s~~p~~~~~~G~~~~~l~~~li~ 338 (343)
T 1e4e_A 287 --GLARVDMFLQDNG-RIVLNEVNTLPGFTSY-SRYPRMMAAAGISLPELIDRLIV 338 (343)
T ss_dssp --EEEEEEEEECTTC-CEEEEEEESSCCCSTT-CHHHHHHHHTTCCHHHHHHHHHH
T ss_pred --eEEEEEEEEeCCC-CEEEEEeeCCCCCCcc-cHHHHHHHHhCCCHHHHHHHHHH
Confidence 9999999999877 7999999999999865 333 3459999999887764
No 35
>4ffl_A PYLC; amino acid, biosynthesis of pyrrolysine, isopeptide bond for ATP-grAsp fold, ligase, ATP-binding, L-lysine and 3R-methyl ornithine; HET: LYS ADP ATP; 1.50A {Methanosarcina barkeri} PDB: 4ffm_A* 4ffn_A* 4ffo_A* 4ffp_A* 4ffr_A*
Probab=100.00 E-value=2.9e-39 Score=330.96 Aligned_cols=354 Identities=17% Similarity=0.153 Sum_probs=245.7
Q ss_pred ccEEEEEeCChhHHHHHHHHHhcCCCcEEEEecCCCCC-cCCCCCccccCCCC-CCHHHHHHHHHHcCCcEEEECCChhh
Q 010065 82 RVVVLVIGGGGREHALCYALKRSHSCDAVFCAPGNAGI-SNSGDATCIPDLDV-LDGDAVISFCRKWSVGLVVVGPEAPL 159 (519)
Q Consensus 82 ~~~vliiG~g~~~~~l~~~l~~~~g~~~v~~~~~~~~~-~~~~~~~~v~~~d~-~d~~~l~~~~~~~~id~Vi~g~E~~~ 159 (519)
+++|+|+|+|..+..+++++++. |++++.++++.... ...+ +....++. .|.+.++.++ +++|+|+++.|...
T Consensus 1 MK~I~ilGgg~~g~~~~~~Ak~~-G~~vv~vd~~~~~~~~~~a--D~~~~~~~~~d~~~~~~~~--~~~D~v~~~~~~~~ 75 (363)
T 4ffl_A 1 MKTICLVGGKLQGFEAAYLSKKA-GMKVVLVDKNPQALIRNYA--DEFYCFDVIKEPEKLLELS--KRVDAVLPVNENLA 75 (363)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT-TCEEEEEESCTTCTTTTTS--SEEEECCTTTCHHHHHHHH--TSSSEEEECCCCHH
T ss_pred CCEEEEECCCHHHHHHHHHHHHC-CCEEEEEeCCCCChhHhhC--CEEEECCCCcCHHHHHHHh--cCCCEEEECCCChh
Confidence 57999999998778888888776 99999997653221 2222 22113343 4566665544 57999999876543
Q ss_pred H-HHHHHHHHHCCCCeeCCcHHHHHHhcCHHHHHHHHHHcCCCCCCeeecCCHHHHHHHHHHhCCCEEEEeCCCCCCCcE
Q 010065 160 V-SGLANKLVKAGIPTFGPSSEAAALEGSKNFMKNLCDKYGIPTAKYKTFTDPNAAKQYIQEEGAPIVVKADGLAAGKGV 238 (519)
Q Consensus 160 ~-~~~a~~le~~gip~~g~~~~~~~~~~dK~~~k~~l~~~Gi~~p~~~~v~~~~~~~~~~~~~g~P~VvKP~~g~gs~GV 238 (519)
. ...++.++..++|+ |++++++.+++||..+|++|+++|+|+|++.. ++||+|+||..++||+|+
T Consensus 76 ~~~~~~~~~~~~~~~~-g~~~~a~~~~~dK~~~k~~l~~~gip~~~~~~-------------ig~P~vvKp~~g~g~~gv 141 (363)
T 4ffl_A 76 CIEFLNSIKEKFSCPV-LFDFEAYRISRDKKKSKDYFKSIGVPTPQDRP-------------SKPPYFVKPPCESSSVGA 141 (363)
T ss_dssp HHHHHHHHGGGCSSCB-CCCHHHHHHHTSHHHHHHHHHHTTCCCCCBSC-------------SSSCEEEECSSCCTTTTC
T ss_pred HHHHHHHHHHHCCCcc-CCCHHHHHHhhCHHHHHHHHHhcCCCCCCcee-------------cCCCEEEEECCCCCCcCe
Confidence 2 23344566778774 79999999999999999999999999999753 589999999999999999
Q ss_pred EEeCCHHHHHHHHHHHHhhccCCCCCCcEEEEeccCCcEEEEEEEEeCCeeEEeccccccccccCCCCCCCCCCceEEec
Q 010065 239 IVAMTLEEAYEAVDSMLLKNAFGSAGCRVIIEEFLEGEEASFFALVDGENAIPLESAQDHKRVGDGDTGPNTGGMGAYSP 318 (519)
Q Consensus 239 ~~v~~~~el~~a~~~~~~~~~~~~~~~~~lvEe~I~G~E~sv~~l~dg~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~P 318 (519)
++++|.+++.. ....+++||||+|+|+++.+++|++....+.....+. .+.+....+.|
T Consensus 142 ~~v~~~~~~~~-------------~~~~~~~ee~i~g~e~sv~~~~d~~~~~~~~~~~~~~--------~~~~~~~~~~p 200 (363)
T 4ffl_A 142 RIIYDDKDLEG-------------LEPDTLVEEYVEGEVVSLEVVGDGSHFAVVKETLVHI--------DETYDCHMVTP 200 (363)
T ss_dssp EEEC------C-------------CCTTCEEEECCCSEEEEEEEEEESSCEEECCCEEEEE--------CTTSCEEEEEE
T ss_pred EEeccHHHhhh-------------hccchhhhhhccCcEEEEEEEEECCeEEEEEEEEecc--------CCcccceeecc
Confidence 99999887642 4578999999999999999999877555444333321 12334567788
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHHcCCCeeeEEEEEEEEEcCCCceEEEEEeCCCCCCchHHHHHHhCCCHHHHHHHH
Q 010065 319 APVLTKELQSVVMESIILPTVKGMSAEGCKFVGVLYAGLMIEKKSGLPKLIEYNVRFGDPECQVLMVRLESDLAEVLLAA 398 (519)
Q Consensus 319 ~~~l~~~~~~~i~~~a~~~~~~~~~a~g~~~~G~~~vdf~~~~~g~~~~viEiN~R~G~~~~~~~~~~~G~d~~~~~i~~ 398 (519)
++ ..+++. +.+ .++++++++. |++++||++++++ +||+|+|||+|+.....+...+|+|++++++++
T Consensus 201 ~~-~~~~~~----~~a----~~~~~~l~~~--G~~~vef~~~~~~--~~viEiN~R~~g~~~~~~~~~~g~dl~~~~~~~ 267 (363)
T 4ffl_A 201 LP-ANPLFR----QIS----HDLAANLPLK--GIMDVEAIFGPKG--LRVIEIDARFPSQTPTVVYYSSGINLIELLFRA 267 (363)
T ss_dssp CC-CCHHHH----HHH----HHHHHTTTCE--EEEEEEEEEETTE--EEEEEEECSCCSSHHHHHHHHHCCCHHHHHHHH
T ss_pred hh-HHHHHH----HHH----HHHHHhCCcc--ceeeeeeEEeCCe--EEEEEEeCCCCCChHHHHHHHHCcCHHHHHHHH
Confidence 87 565433 333 2445677755 9999999999876 999999999876544466677899999999999
Q ss_pred HhCCCCCCCcccCCCcE-EEEEEecCCCCCCCCCCcccccchhhhccCCCeEEEEeeeeecCCCcEEecCCeEEEEEEec
Q 010065 399 CRGELTGVTLNWSPGSA-MVVVMASKGYPGSYEKGSEIQNLEEAEQVAPSVKIFHAGTALDADGNFIATGGRVLGVTAKG 477 (519)
Q Consensus 399 ~~g~~~~~~~~~~~~~a-~~~~l~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~rvg~vi~~g 477 (519)
++|.+.+......++.+ ...+...++ +.....+ +.+....+++..|+..... .+.+.+.++|+++|+++|
T Consensus 268 ~~g~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~------~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~v~~vi~~G 338 (363)
T 4ffl_A 268 FTDGVEEIRAIPENKYCIYEHLMFGEN-GVLIPVG------EQVLSMGSDYGKFYEEPGI--EIFLCKGEYPVFTMVFWG 338 (363)
T ss_dssp TTTCCCCC----CCCEEEEEEEEECGG-GBEEECC------HHHHTTCSEEEEEEEETTE--EEEEEESSSCEEEEEEEE
T ss_pred HCCCCCCccccCCCceEEEEEEecCCC-CccCCCC------ceEEecCCCeeEEEecCCC--CCEecCCCCceEEEEEEE
Confidence 99986554433333444 334444332 1111111 2222223445555543221 244667889999999999
Q ss_pred CCHHHHHHHHHHHhhccccC
Q 010065 478 KDVEEAQDRAYLAVEEINWP 497 (519)
Q Consensus 478 ~t~~ea~~~a~~~~~~i~~~ 497 (519)
+|++||+++++++++.|+.+
T Consensus 339 ~~~~eA~~k~~~al~~i~~~ 358 (363)
T 4ffl_A 339 KDREETGAKRCKGLSVLKER 358 (363)
T ss_dssp SSHHHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHH
Confidence 99999999999999998754
No 36
>1w96_A ACC, acetyl-coenzyme A carboxylase; ligase, obesity, diabetes, fatty acid metabolism, structure-based drug design; HET: S1A; 1.8A {Saccharomyces cerevisiae} SCOP: b.84.2.1 c.30.1.1 d.142.1.2 PDB: 1w93_A
Probab=100.00 E-value=6e-39 Score=345.68 Aligned_cols=397 Identities=16% Similarity=0.155 Sum_probs=274.2
Q ss_pred ccEEEEEeCChhHHHHHHHHHhc--------CCCcEEEEec--C-CCC--CcCCCCCc-cccC----CCCCCHHHHHHHH
Q 010065 82 RVVVLVIGGGGREHALCYALKRS--------HSCDAVFCAP--G-NAG--ISNSGDAT-CIPD----LDVLDGDAVISFC 143 (519)
Q Consensus 82 ~~~vliiG~g~~~~~l~~~l~~~--------~g~~~v~~~~--~-~~~--~~~~~~~~-~v~~----~d~~d~~~l~~~~ 143 (519)
.++|||+|+|.....+++++++. .|++++.+.. + ++. ....++.. .++. -+..|.+.+++++
T Consensus 47 ~kkILI~g~g~~a~~iira~~~~G~~vi~~d~gi~~v~v~s~~D~~~~~~~~~~aD~~~~ip~~~~~~~y~d~~~l~~~a 126 (554)
T 1w96_A 47 ISKILIANNGIAAVKEIRSVRKWAYETFGDDRTVQFVAMATPEDLEANAEYIRMADQYIEVPGGTNNNNYANVDLIVDIA 126 (554)
T ss_dssp CCEEEECCCHHHHHHHHHHHHHHHHHHHSCTTSSEEEEEECHHHHHTTCHHHHHSSEEEECCCSSGGGTTTCHHHHHHHH
T ss_pred ccEEEEECCCHHHHHHHHHHHHcCCcceecccCceEEEEecccccccCChhhhhCCEEEEcCCCCccccccCHHHHHHHH
Confidence 46999999887767788888775 1444455432 1 111 11111111 1110 1446789999999
Q ss_pred HHcCCcEEEECC----ChhhHHHHHHHHHHCC--CCeeCCcHHHHHHhcCHHHHHHHHHHcCCCCCCeeec---------
Q 010065 144 RKWSVGLVVVGP----EAPLVSGLANKLVKAG--IPTFGPSSEAAALEGSKNFMKNLCDKYGIPTAKYKTF--------- 208 (519)
Q Consensus 144 ~~~~id~Vi~g~----E~~~~~~~a~~le~~g--ip~~g~~~~~~~~~~dK~~~k~~l~~~Gi~~p~~~~v--------- 208 (519)
+++++|+|+++. |+..+ +..++++| ++++|++++++.+++||..++++++++|||+|++..+
T Consensus 127 ~~~~id~Vi~g~G~~sE~~~~---~~~l~~~g~~i~~~gp~~~a~~~~~dK~~~k~~l~~~GIp~p~~~~~~~~~~~~~~ 203 (554)
T 1w96_A 127 ERADVDAVWAGWGHASENPLL---PEKLSQSKRKVIFIGPPGNAMRSLGDKISSTIVAQSAKVPCIPWSGTGVDTVHVDE 203 (554)
T ss_dssp HHTTCSEEECCSSTTTTCTHH---HHHHHHSTTCCEESSCCHHHHHHSCSHHHHHHHHHHTTCCBCCBTTTTCCCCEECT
T ss_pred HHhCCCEEEECCCccccCHHH---HHHHHHcCCeEEEeCCCHHHHHHHhCHHHHHHHHHHCCCCcCCccccccccccccc
Confidence 999999999963 77654 34589999 9999999999999999999999999999999998765
Q ss_pred -----------------CCHHHHHHHHHHhCCCEEEEeCCCCCCCcEEEeCCHHHHHHHHHHHHhhccCCCCCCcEEEEe
Q 010065 209 -----------------TDPNAAKQYIQEEGAPIVVKADGLAAGKGVIVAMTLEEAYEAVDSMLLKNAFGSAGCRVIIEE 271 (519)
Q Consensus 209 -----------------~~~~~~~~~~~~~g~P~VvKP~~g~gs~GV~~v~~~~el~~a~~~~~~~~~~~~~~~~~lvEe 271 (519)
.+.+++.+++++++||+||||..++||+||+++++.+|+.++++.+... ..+..++|||
T Consensus 204 ~~~l~~ip~~~~~~~~~~~~~e~~~~~~~~g~PvVvKp~~g~gg~Gv~~v~~~~el~~a~~~~~~~----~~~~~vlvEe 279 (554)
T 1w96_A 204 KTGLVSVDDDIYQKGCCTSPEDGLQKAKRIGFPVMIKASEGGGGKGIRQVEREEDFIALYHQAANE----IPGSPIFIMK 279 (554)
T ss_dssp TTCCEECCHHHHGGGSCSSHHHHHHHHHHHCSSEEEEETTCCTTTTEEEECSHHHHHHHHHHHHHH----STTCCEEEEE
T ss_pred cccccccccccccccCCCCHHHHHHHHHHcCCCEEEEECCCCCCceEEEECCHHHHHHHHHHHHhh----ccCCCEEEEE
Confidence 7888888888899999999999999999999999999999999988753 1357899999
Q ss_pred ccCC-cEEEEEEEEeC-CeeEEeccccccccccCCCCCCCCCCceEEecCCCCCHHHHHHHHHHHHHHHHHHHHHcCCCe
Q 010065 272 FLEG-EEASFFALVDG-ENAIPLESAQDHKRVGDGDTGPNTGGMGAYSPAPVLTKELQSVVMESIILPTVKGMSAEGCKF 349 (519)
Q Consensus 272 ~I~G-~E~sv~~l~dg-~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~P~~~l~~~~~~~i~~~a~~~~~~~~~a~g~~~ 349 (519)
||+| +|+++.+++|+ +.++.+..... .+.++..++ ....|+..++++..+++.+.+ .++++++|+.
T Consensus 280 ~i~g~~e~sv~vl~d~~G~vv~l~~~~~--~~~~~~~k~-----~~~~P~~~l~~~~~~~i~~~a----~~~~~alg~~- 347 (554)
T 1w96_A 280 LAGRARHLEVQLLADQYGTNISLFGRDC--SVQRRHQKI-----IEEAPVTIAKAETFHEMEKAA----VRLGKLVGYV- 347 (554)
T ss_dssp CCCSCEEEEEEEEECTTSCEEEEEEEEE--EEEETTEEE-----EEEESCCSSCHHHHHHHHHHH----HHHHHHHTCC-
T ss_pred ecCCCcEEEEEEEEcCCCCEEEEeeeee--eeEeeccce-----eeeCCCcCCCHHHHHHHHHHH----HHHHHHcCCc-
Confidence 9996 89999999875 34443322100 001111111 124577657888888887765 4677888877
Q ss_pred eeEEEEEEEEE-cCCCceEEEEEeCCCCCCchHHHHHHhCCCHHHHHHHHHhCCCCCCC------------------cc-
Q 010065 350 VGVLYAGLMIE-KKSGLPKLIEYNVRFGDPECQVLMVRLESDLAEVLLAACRGELTGVT------------------LN- 409 (519)
Q Consensus 350 ~G~~~vdf~~~-~~g~~~~viEiN~R~G~~~~~~~~~~~G~d~~~~~i~~~~g~~~~~~------------------~~- 409 (519)
|++++||+++ ++| ++||+|+|||+|++.. .+...+|+|+.++++++++|...... ..
T Consensus 348 -G~~~ve~~~~~~dg-~~~~iEiN~R~~g~~~-~~~~~~G~dl~~~~~~~a~G~~l~~~~~~~~~~g~~~~~~~~i~~~~ 424 (554)
T 1w96_A 348 -SAGTVEYLYSHDDG-KFYFLELNPRLQVEHP-TTEMVSGVNLPAAQLQIAMGIPMHRISDIRTLYGMNPHSASEIDFEF 424 (554)
T ss_dssp -EEEEEEEEECTTTC-CEEEEEEECSCCTTTH-HHHHHHCCCHHHHHHHHHTTCCGGGCHHHHHHTTCCTTCCCCCCTTC
T ss_pred -ceEEEEEEEECCCC-CEEEEEeeCCCCccee-hhhhhcCCCHHHHHHHHHcCCCcccccchhhhccCCccccccccccc
Confidence 9999999998 555 7999999999988743 23245799999999999999833211 10
Q ss_pred ------------cCCCcEEEEEEecCCCCCC--CCCCcccccchhhhccCCCeEEEEeeeeec-CCCcEEecCCeEEEEE
Q 010065 410 ------------WSPGSAMVVVMASKGYPGS--YEKGSEIQNLEEAEQVAPSVKIFHAGTALD-ADGNFIATGGRVLGVT 474 (519)
Q Consensus 410 ------------~~~~~a~~~~l~~~~~~~~--~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~-~~g~~~~~~~rvg~vi 474 (519)
...++++...+.+..+... +..| .+..+... ..+++++ +.+...+ ..+.. .++|+++|+
T Consensus 425 ~~~~~~~~~~~~~~~g~~i~~r~~~~~~~~~~~p~~G-~i~~~~~~--~~~~v~~-~~~~~~g~~i~~~--~~~~~~~vi 498 (554)
T 1w96_A 425 KTQDATKKQRRPIPKGHCTACRITSEDPNDGFKPSGG-TLHELNFR--SSSNVWG-YFSVGNNGNIHSF--SDSQFGHIF 498 (554)
T ss_dssp CSHHHHHHCCCCCCCSEEEEEEEEEECCCCSSCCCSS-SEEEECCS--SCSSEEE-EEEECCSCSSCSS--CSEEEEEEE
T ss_pred cccccccccccCCCCeEEEEEEEEccCCCCCcccCCe-EEeEEecC--CCCCEEE-eeecccCCccCCC--CCCceEEEE
Confidence 1224444333332221111 1111 12222110 1245544 3333221 11222 345999999
Q ss_pred EecCCHHHHHHHHHHHhhccccCCeeecccccc
Q 010065 475 AKGKDVEEAQDRAYLAVEEINWPGGFYRRDIGW 507 (519)
Q Consensus 475 ~~g~t~~ea~~~a~~~~~~i~~~g~~~r~dig~ 507 (519)
+.|+|.++|+++++++++.++++|. ||+||+.
T Consensus 499 ~~g~~~~eA~~~~~~al~~i~i~g~-~~~~i~~ 530 (554)
T 1w96_A 499 AFGENRQASRKHMVVALKELSIRGD-FRTTVEY 530 (554)
T ss_dssp EEESSHHHHHHHHHHHHHHHTTCC-----CCHH
T ss_pred EEeCCHHHHHHHHHHHHhccEEEee-ccCCHHH
Confidence 9999999999999999999999999 9999994
No 37
>3r5x_A D-alanine--D-alanine ligase; alpha-beta structure, cytosol, structural genomics, for structural genomics of infectious diseases, csgid; HET: MSE ATP; 2.00A {Bacillus anthracis} PDB: 3r23_A*
Probab=100.00 E-value=1.9e-41 Score=339.18 Aligned_cols=285 Identities=18% Similarity=0.227 Sum_probs=224.5
Q ss_pred cceeEEEeeccCCCCCcccccCCCCCCCccEEEEEeCChhHHHHHHHHHhcCCCcEEEEecCCCCCcCCCCCccccCCCC
Q 010065 54 SSFFSTVKCLAQKSQPSVSVNAPTNAGQRVVVLVIGGGGREHALCYALKRSHSCDAVFCAPGNAGISNSGDATCIPDLDV 133 (519)
Q Consensus 54 ~~~~i~v~~GG~s~e~~vS~~s~~~~~~~~~vliiG~g~~~~~l~~~l~~~~g~~~v~~~~~~~~~~~~~~~~~v~~~d~ 133 (519)
.+|||+||+||.|+||+||+.|+.. ++.+|++. |++++.++.++.
T Consensus 2 ~~m~v~vl~gg~s~e~~vs~~s~~~------------------v~~al~~~-g~~v~~i~~~~~---------------- 46 (307)
T 3r5x_A 2 NAMRIGVIMGGVSSEKQVSIMTGNE------------------MIANLDKN-KYEIVPITLNEK---------------- 46 (307)
T ss_dssp CCEEEEEEECCSHHHHHHHHHHHHH------------------HHHHSCTT-TEEEEEEECSSG----------------
T ss_pred CCcEEEEEeCCCCcchHhHHHHHHH------------------HHHHHHHC-CCEEEEEcccCc----------------
Confidence 4799999999999999999999765 67777666 898887754321
Q ss_pred CCHHHHHHHHHHcCCcEEEECC-----ChhhHHHHHHHHHHCCCCeeCCcHHHHHHhcCHHHHHHHHHHcCCCCCCeeec
Q 010065 134 LDGDAVISFCRKWSVGLVVVGP-----EAPLVSGLANKLVKAGIPTFGPSSEAAALEGSKNFMKNLCDKYGIPTAKYKTF 208 (519)
Q Consensus 134 ~d~~~l~~~~~~~~id~Vi~g~-----E~~~~~~~a~~le~~gip~~g~~~~~~~~~~dK~~~k~~l~~~Gi~~p~~~~v 208 (519)
+.+ +.+..++|+||+.. |++.++ ..++.+|+|++|++++++.+++||..++++++++|||+|++..+
T Consensus 47 ---~~~--~~~~~~~D~v~~~~~~~~ge~~~~~---~~le~~gi~~~g~~~~~~~~~~dK~~~~~~l~~~Gip~p~~~~~ 118 (307)
T 3r5x_A 47 ---MDL--IEKAKDIDFALLALHGKYGEDGTVQ---GTLESLGIPYSGSNMLSSGICMDKNISKKILRYEGIETPDWIEL 118 (307)
T ss_dssp ---GGH--HHHTTTCSEEEECCCSHHHHSSHHH---HHHHHHTCCBSSSCHHHHHHHHCHHHHHHHHHHTTCCCCCEEEE
T ss_pred ---hhH--HHhccCCCEEEEeCCCCCCcHHHHH---HHHHHcCCCeeCcCHHHHHHHcCHHHHHHHHHHCCCCCCCEEEE
Confidence 001 11225899999953 666544 45999999999999999999999999999999999999999999
Q ss_pred CCHHHHHH-HHHHhCCCEEEEeCCCCCCCcEEEeCCHHHHHHHHHHHHhhccCCCCCCcEEEEeccCCcEEEEEEEEeCC
Q 010065 209 TDPNAAKQ-YIQEEGAPIVVKADGLAAGKGVIVAMTLEEAYEAVDSMLLKNAFGSAGCRVIIEEFLEGEEASFFALVDGE 287 (519)
Q Consensus 209 ~~~~~~~~-~~~~~g~P~VvKP~~g~gs~GV~~v~~~~el~~a~~~~~~~~~~~~~~~~~lvEe~I~G~E~sv~~l~dg~ 287 (519)
.+.+++.. +.+.++||+|+||..++||.||.++++.+|+.++++.++. .+..+||||||+|+|+++.++ +|+
T Consensus 119 ~~~~~~~~~~~~~~~~P~vvKP~~~~~s~Gv~~v~~~~el~~~~~~~~~------~~~~~lvee~i~G~e~~v~v~-~g~ 191 (307)
T 3r5x_A 119 TKMEDLNFDELDKLGFPLVVKPNSGGSSVGVKIVYDKDELISMLETVFE------WDSEVVIEKYIKGEEITCSIF-DGK 191 (307)
T ss_dssp ESSSCCCHHHHHHHCSSEEEEECC----CCCEEECSHHHHHHHHHHHHH------HCSEEEEEECCCSEEEEEEEE-TTE
T ss_pred eChhhhhHHHHHhcCCCEEEEeCCCCCCCCEEEeCCHHHHHHHHHHHHh------cCCCEEEECCcCCEEEEEEEE-CCE
Confidence 88766543 6778999999999999999999999999999999998875 357999999999999999986 553
Q ss_pred eeEEeccccccccccCCCCCCCCCCceEEecCCCCCHHHHHHHHHHHHHHHHHHHHHcCCCeeeEEEEEEEEEcCCCceE
Q 010065 288 NAIPLESAQDHKRVGDGDTGPNTGGMGAYSPAPVLTKELQSVVMESIILPTVKGMSAEGCKFVGVLYAGLMIEKKSGLPK 367 (519)
Q Consensus 288 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~P~~~l~~~~~~~i~~~a~~~~~~~~~a~g~~~~G~~~vdf~~~~~g~~~~ 367 (519)
.+++........++++..++..++.... |++ ++++..+++++.+ .+++.++|++ |++++||++++ + ++|
T Consensus 192 -~~~~~~~~~~~~~~~~~~~~~~~g~~~~-p~~-l~~~~~~~i~~~a----~~~~~~lg~~--G~~~vD~~~~~-g-~~~ 260 (307)
T 3r5x_A 192 -QLPIISIRHAAEFFDYNAKYDDASTIEE-VIE-LPAELKERVNKAS----LACYKALKCS--VYARVDMMVKD-G-IPY 260 (307)
T ss_dssp -ECCCEEEEEEEEEETTEEEEEEEEEEEE-ECC-CCHHHHHHHHHHH----HHHHHHTTCC--SEEEEEEEEET-T-EEE
T ss_pred -EeeEEEEEcCCcccChhhcCCCCCCeEe-cCC-CCHHHHHHHHHHH----HHHHHHhCCC--ceEEEEEEEEC-C-eEE
Confidence 4333333344456677766644444545 887 8999888888776 4688899987 99999999995 4 699
Q ss_pred EEEEeCCCCCCchHHHHH----HhCCCHHHHHHHHHh
Q 010065 368 LIEYNVRFGDPECQVLMV----RLESDLAEVLLAACR 400 (519)
Q Consensus 368 viEiN~R~G~~~~~~~~~----~~G~d~~~~~i~~~~ 400 (519)
++|||+|||++.. ++++ .+|+|+.+++.+++.
T Consensus 261 vlEiN~rpg~~~~-s~~~~~~~~~G~~~~~li~~ll~ 296 (307)
T 3r5x_A 261 VMEVNTLPGMTQA-SLLPKSADAAGIHYSKLLDMIIE 296 (307)
T ss_dssp EEEEESSCCCSTT-SHHHHHHHHTTCCHHHHHHHHHH
T ss_pred EEEEcCCCCCCcc-CHHHHHHHHcCCCHHHHHHHHHH
Confidence 9999999998876 4444 349999998887764
No 38
>3jrx_A Acetyl-COA carboxylase 2; BC domain, soraphen A, alternative splicing, ATP-binding, biotin, fatty acid biosynthesis, ligase, lipid synthesis; HET: S1A; 2.50A {Homo sapiens} PDB: 3jrw_A*
Probab=100.00 E-value=3.5e-39 Score=344.87 Aligned_cols=388 Identities=18% Similarity=0.210 Sum_probs=279.1
Q ss_pred ccEEEEEeCChhHHHHHHHHHhc--------CCCcEEEEecC-----CCCCcCCCCCc-ccc----CCCCCCHHHHHHHH
Q 010065 82 RVVVLVIGGGGREHALCYALKRS--------HSCDAVFCAPG-----NAGISNSGDAT-CIP----DLDVLDGDAVISFC 143 (519)
Q Consensus 82 ~~~vliiG~g~~~~~l~~~l~~~--------~g~~~v~~~~~-----~~~~~~~~~~~-~v~----~~d~~d~~~l~~~~ 143 (519)
.+||||.|.|.....+++++++. .|++++.+... +......++.. .+. .-+..|.+.+++++
T Consensus 56 ~~kvLIanrGeiA~riira~r~lG~e~f~~e~Gi~tVav~s~~D~~~~a~~~~~ADe~v~i~~~~~~~syld~~~Il~~a 135 (587)
T 3jrx_A 56 IEKVLIANNGIAAVKCMRSIRRWAYEMFRNERAIRFVVMVTPEDLKANAEYIKMADHYVPVPGGPNNNNYANVELIVDIA 135 (587)
T ss_dssp CCEEEECCCHHHHHHHHHHHHHHHHHHHSCTTSSEEEEEECHHHHHTTCHHHHHSSEEEECCCSSGGGTTTCHHHHHHHH
T ss_pred cCEEEEECChHHHHHHHHHHHHhhhccccccCCceEEEEecccccCcCChhhHhCCEEEEeCCCCccccccCHHHHHHHH
Confidence 46999999997666777777753 37888887421 11111112211 110 12566799999999
Q ss_pred HHcCCcEEEEC----CChhhHHHHHHHHHHCCCCeeCCcHHHHHHhcCHHHHHHHHHHcCCCCCCeee------------
Q 010065 144 RKWSVGLVVVG----PEAPLVSGLANKLVKAGIPTFGPSSEAAALEGSKNFMKNLCDKYGIPTAKYKT------------ 207 (519)
Q Consensus 144 ~~~~id~Vi~g----~E~~~~~~~a~~le~~gip~~g~~~~~~~~~~dK~~~k~~l~~~Gi~~p~~~~------------ 207 (519)
++.++|+|+|+ +|++. +++.++..|+|++|++++++.++.||..+|++++++|||+|++..
T Consensus 136 ~~~~vdaV~pG~GflsEn~~---~a~~le~~Gi~~iGp~~~ai~~~~DK~~ak~ll~~aGVPvpp~~~~~l~~~~~~~~~ 212 (587)
T 3jrx_A 136 KRIPVQAVWAGWGHASENPK---LPELLCKNGVAFLGPPSEAMWALGDKIASTVVAQTLQVPTLPWSGSGLTVEWTEDDL 212 (587)
T ss_dssp HHTTCSEEECCSSTTTTCTH---HHHHHHTTTCEESSCCHHHHHHHCSHHHHHHHHHHTTCCBCCBTTTTCCCCC-----
T ss_pred HHhCCCEEEeCCCccccCHH---HHHHHHHCCCCeeCCCHHHHHHhCCHHHHHHHHHHcCCCCCCeeccccccccccccc
Confidence 99999999996 57764 456699999999999999999999999999999999999999876
Q ss_pred -----------------cCCHHHHHHHHHHhCCCEEEEeCCCCCCCcEEEeCCHHHHHHHHHHHHhhccCCCCCCcEEEE
Q 010065 208 -----------------FTDPNAAKQYIQEEGAPIVVKADGLAAGKGVIVAMTLEEAYEAVDSMLLKNAFGSAGCRVIIE 270 (519)
Q Consensus 208 -----------------v~~~~~~~~~~~~~g~P~VvKP~~g~gs~GV~~v~~~~el~~a~~~~~~~~~~~~~~~~~lvE 270 (519)
+.+.+++.++++++|||+||||..++||+||++|++.+|+.++++.+... ..+..++||
T Consensus 213 ~~~~~~~~~~~~~~~~~v~s~eea~~~a~~iGyPvVVKp~~GgGGkGv~iV~s~eEL~~a~~~a~~~----~~~~~vlVE 288 (587)
T 3jrx_A 213 QQGKRISVPEDVYDKGCVKDVDEGLEAAERIGFPLMIKASEGGGGKGIRKAESAEDFPILFRQVQSE----IPGSPIFLM 288 (587)
T ss_dssp -CCCCCCCCHHHHHTTSCCSHHHHHHHHHHHCSSEEEEETTCCSSSSEEEECSTTTHHHHHHHHHHH----STTCCEEEE
T ss_pred ccccccccchhhccccccCCHHHHHHHHHhcCCeEEEEeCCCCCCCCeEEeCCHHHHHHHHHHHHhh----ccCCCEEEE
Confidence 78889999999999999999999999999999999999999999988753 135789999
Q ss_pred eccCC-cEEEEEEEEeC-CeeEEeccccccccccCCCCCCCCCCceEEecCCCCCHHHHHHHHHHHHHHHHHHHHHcCCC
Q 010065 271 EFLEG-EEASFFALVDG-ENAIPLESAQDHKRVGDGDTGPNTGGMGAYSPAPVLTKELQSVVMESIILPTVKGMSAEGCK 348 (519)
Q Consensus 271 e~I~G-~E~sv~~l~dg-~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~P~~~l~~~~~~~i~~~a~~~~~~~~~a~g~~ 348 (519)
+||+| +|++|.++.|+ +.++.+..... .+.....++ ....|++.++++..+++.+.+. ++++++|+.
T Consensus 289 eyI~g~rei~V~vl~D~~G~vv~l~~rd~--siqrr~qk~-----ie~aPa~~l~~~~~~~i~~~A~----~~a~alGy~ 357 (587)
T 3jrx_A 289 KLAQHARHLEVQILADQYGNAVSLFGRDC--SIQRRHQKI-----VEEAPATIAPLAIFEFMEQCAI----RLAKTVGYV 357 (587)
T ss_dssp ECCCSCEEEEEEEEECSSSCEEEEEEEEE--EEESSSCEE-----EEEESCCSSCHHHHHHHHHHHH----HHHHHHTCC
T ss_pred EecCCCcEEEEEEEEcCCCCEEEEeeeec--cccccccce-----eEecCCCCCCHHHHHHHHHHHH----HHHHHcCCc
Confidence 99999 99999999975 34444432110 011111111 2346888679988888888764 677888876
Q ss_pred eeeEEEEEEEEEcCCCceEEEEEeCCCCCCchHHHHHHhCCCHHHHHHHHHhCCCCC-CC-----------------c--
Q 010065 349 FVGVLYAGLMIEKKSGLPKLIEYNVRFGDPECQVLMVRLESDLAEVLLAACRGELTG-VT-----------------L-- 408 (519)
Q Consensus 349 ~~G~~~vdf~~~~~g~~~~viEiN~R~G~~~~~~~~~~~G~d~~~~~i~~~~g~~~~-~~-----------------~-- 408 (519)
|++++||+++++| ++||+|||||++++.. .....+|+|++++++++++|.... .. .
T Consensus 358 --G~~~VEfl~d~dG-~~yflEINpRl~~e~~-vte~~tGvdlv~~~lria~G~pL~~~~di~~~~~~~~~~~~~~~~~~ 433 (587)
T 3jrx_A 358 --SAGTVEYLYSQDG-SFHFLELNPRLQVEHP-CTEMIADVNLPAAQLQIAMGVPLHRLKDIRLLYGESPWGVTPISFET 433 (587)
T ss_dssp --EEEEEEEEECSSS-CEEEEEEESSCCTTHH-HHHHHHTCCHHHHHHHHHTTCCGGGCHHHHHHTTCCTTCCCCCCSSS
T ss_pred --ceeEEEEEEeCCC-CEEEEEEeCCCCCccc-eeccccCCCHHHHHHHHHCCCCcccchhccccccccccccccccccc
Confidence 9999999999876 8999999999987654 444567999999999999998432 00 0
Q ss_pred ----ccCCCcEEEEEEecCCCCC-C--CCCCcccccchhhhccCCCeEEEEeeeeecCCCcEEe-cCCeEEEEEEecCCH
Q 010065 409 ----NWSPGSAMVVVMASKGYPG-S--YEKGSEIQNLEEAEQVAPSVKIFHAGTALDADGNFIA-TGGRVLGVTAKGKDV 480 (519)
Q Consensus 409 ----~~~~~~a~~~~l~~~~~~~-~--~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~-~~~rvg~vi~~g~t~ 480 (519)
....++++.+.+..+. |. . +..| .|..+... ..++++.+.... ..|.+.. .+..++.++++|.|+
T Consensus 434 ~~~~~~~~ghaie~Ri~aed-p~~~f~p~~G-~i~~~~~~--~~~~v~~~~~~~---~~~~~~~~yd~~~~k~i~~g~~r 506 (587)
T 3jrx_A 434 PSNPPLARGHVIAARITSEN-PDEGFKPSSG-TVQELNFR--SSKNVWGYFSVA---ATGGLHEFADSQFGHCFSWGENR 506 (587)
T ss_dssp CSSCCCCCSEEEEEEEEC-----------CC-CCEEEECS--SCTTEEEEECCC-------------CCEEEEEEEESSH
T ss_pred ccccCCCCceEEEEeecccC-ccccCCCCCc-EEEEEEeC--CCCceEEecccc---ccCCcCcccCcccceEEEEcCCH
Confidence 1234788888766654 21 1 1111 12222110 123444332111 1222222 367789999999999
Q ss_pred HHHHHHHHHHhhccccCC
Q 010065 481 EEAQDRAYLAVEEINWPG 498 (519)
Q Consensus 481 ~ea~~~a~~~~~~i~~~g 498 (519)
++|++++.++++.+.+.|
T Consensus 507 ~~a~~~~~~al~~~~i~g 524 (587)
T 3jrx_A 507 EEAISNMVVALKELSIRG 524 (587)
T ss_dssp HHHHHHHHHHHHHHHHSS
T ss_pred HHHHHHHHHHHhccEEeC
Confidence 999999999999999999
No 39
>3orq_A N5-carboxyaminoimidazole ribonucleotide synthetas; ATP-grAsp superfamily, ligase,biosynthetic protein; HET: MSE ADP; 2.23A {Staphylococcus aureus subsp} PDB: 3orr_A
Probab=100.00 E-value=2.5e-38 Score=325.31 Aligned_cols=360 Identities=14% Similarity=0.148 Sum_probs=268.5
Q ss_pred CCCccEEEEEeCChhHHHHHHHHHhcCCCcEEEEecCCC-CCcCCCCCccccCCCCCCHHHHHHHHHHcCCcEEEECCCh
Q 010065 79 AGQRVVVLVIGGGGREHALCYALKRSHSCDAVFCAPGNA-GISNSGDATCIPDLDVLDGDAVISFCRKWSVGLVVVGPEA 157 (519)
Q Consensus 79 ~~~~~~vliiG~g~~~~~l~~~l~~~~g~~~v~~~~~~~-~~~~~~~~~~v~~~d~~d~~~l~~~~~~~~id~Vi~g~E~ 157 (519)
+...++|+|+|+|...+.+++++++. |+++++++++.. .....++ ..+ ..+..|.+.+.+++++ +|+|.++.|+
T Consensus 9 ~~~~~~IlIlG~G~lg~~la~aa~~l-G~~viv~d~~~~~p~~~~ad-~~~-~~~~~d~~~l~~~~~~--~dvi~~~~E~ 83 (377)
T 3orq_A 9 LKFGATIGIIGGGQLGKMMAQSAQKM-GYKVVVLDPSEDCPCRYVAH-EFI-QAKYDDEKALNQLGQK--CDVITYEFEN 83 (377)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHT-TCEEEEEESCTTCTTGGGSS-EEE-ECCTTCHHHHHHHHHH--CSEEEESSTT
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHC-CCEEEEEECCCCChhhhhCC-EEE-ECCCCCHHHHHHHHHh--CCcceecccc
Confidence 34568999999998888889988877 999999986532 2222222 223 4677889999999876 7888888777
Q ss_pred hhHHHHHHHHHHCCCCeeCCcHHHHHHhcCHHHHHHHHHHcCCCCCCeeecCCHHHHHHHHHHhCCCEEEEeCCCC-CCC
Q 010065 158 PLVSGLANKLVKAGIPTFGPSSEAAALEGSKNFMKNLCDKYGIPTAKYKTFTDPNAAKQYIQEEGAPIVVKADGLA-AGK 236 (519)
Q Consensus 158 ~~~~~~a~~le~~gip~~g~~~~~~~~~~dK~~~k~~l~~~Gi~~p~~~~v~~~~~~~~~~~~~g~P~VvKP~~g~-gs~ 236 (519)
.....+ +.++..+ .++++++++.+++||..+|++|+++|||+|++..+.+.+++.++++++|||+|+||..++ +|+
T Consensus 84 ~~~~~l-~~l~~~~--~v~p~~~~~~~~~dK~~~k~~l~~~Gip~p~~~~~~~~~~~~~~~~~~g~P~vvKp~~gg~~g~ 160 (377)
T 3orq_A 84 ISAQQL-KLLCEKY--NIPQGYQAIQLLQDRLTEKETLKSAGTKVVPFISVKESTDIDKAIETLGYPFIVKTRFGGYDGK 160 (377)
T ss_dssp SCHHHH-HHHHHHS--CCTTTTHHHHHHHSHHHHHHHHHHTTCCBCCEEEECSSTHHHHHHHHTCSSEEEEESSSCCTTT
T ss_pred cCHHHH-HHHhhhc--CCCCCHHHHHHhcCHHHHHHHHHHCCCCCCCeEEECCHHHHHHHHHHcCCCEEEEeCCCCCCCC
Confidence 655433 3444433 235999999999999999999999999999999999999999999999999999999997 899
Q ss_pred cEEEeCCHHHHHHHHHHHHhhccCCCCCCcEEEEeccCC-cEEEEEEEEe-CCeeEEeccccccccccCCCCCCCCCCce
Q 010065 237 GVIVAMTLEEAYEAVDSMLLKNAFGSAGCRVIIEEFLEG-EEASFFALVD-GENAIPLESAQDHKRVGDGDTGPNTGGMG 314 (519)
Q Consensus 237 GV~~v~~~~el~~a~~~~~~~~~~~~~~~~~lvEe~I~G-~E~sv~~l~d-g~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 314 (519)
|++++++.+|+.++++.+. ...+|||+||+| +|+++.++++ ++.+..++....... + +. ...
T Consensus 161 Gv~~v~~~~el~~a~~~~~--------~~~~ivEe~i~g~~E~sv~~~~~~~g~~~~~~~~e~~~~--~---g~---~~~ 224 (377)
T 3orq_A 161 GQVLINNEKDLQEGFKLIE--------TSECVAEKYLNIKKEVSLTVTRGNNNQITFFPLQENEHR--N---QI---LFK 224 (377)
T ss_dssp TEEEECSTTSHHHHHHHHT--------TSCEEEEECCCEEEEEEEEEEECGGGCEEECCCEEEEEE--T---TE---EEE
T ss_pred CeEEECCHHHHHHHHHhcC--------CCcEEEEccCCCCEEEEEEEEEeCCCCEEEECCEeEEEE--C---CE---EEE
Confidence 9999999999999998873 378999999999 9999999964 333444443322111 0 00 124
Q ss_pred EEecCCCCCHHHHHHHHHHHHHHHHHHHHHcCCCeeeEEEEEEEEEcCCCceEEEEEeCCCCCCchHHHHHHhCCCHHHH
Q 010065 315 AYSPAPVLTKELQSVVMESIILPTVKGMSAEGCKFVGVLYAGLMIEKKSGLPKLIEYNVRFGDPECQVLMVRLESDLAEV 394 (519)
Q Consensus 315 ~~~P~~~l~~~~~~~i~~~a~~~~~~~~~a~g~~~~G~~~vdf~~~~~g~~~~viEiN~R~G~~~~~~~~~~~G~d~~~~ 394 (519)
.+.|+. +++ .+++++.+ .+++.++|+. |++++||+++++| ++||+|||||||++.++++. .++.+.+++
T Consensus 225 ~~~Pa~-l~~--~~~~~~~a----~~i~~~lg~~--G~~~ve~~~~~~g-~~~v~EinpR~~~sg~~t~~-~~~~s~f~~ 293 (377)
T 3orq_A 225 TIVPAR-IDK--TAEAKEQV----NKIIQSIHFI--GTFTVEFFIDSNN-QLYVNEIAPRPHNSGHYSIE-ACDYSQFDT 293 (377)
T ss_dssp EEESCS-SCC--HHHHHHHH----HHHHTTSCCC--EEEEEEEEEETTC-CEEEEEEESSCCGGGTTHHH-HBSSCHHHH
T ss_pred EECCCC-CCH--HHHHHHHH----HHHHHHCCCe--EEEEEEEEEeCCC-cEEEEEeeCCcCCCCcEeeh-hcCCCHHHH
Confidence 567887 666 55666665 4677888875 9999999999776 79999999999998886654 579999999
Q ss_pred HHHHHhCCCCCCCcccCCCcEEEEEEecCCCCCCCCCCcccccchhhhccCCCeEEEEeeeeecCCCcEEecCCeEEEEE
Q 010065 395 LLAACRGELTGVTLNWSPGSAMVVVMASKGYPGSYEKGSEIQNLEEAEQVAPSVKIFHAGTALDADGNFIATGGRVLGVT 474 (519)
Q Consensus 395 ~i~~~~g~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~rvg~vi 474 (519)
+++.++|......+......++.++++.. ..+++++....++++++++|... ...+.++|||+
T Consensus 294 ~~ra~~G~pl~~~~~~~~~~~m~n~lg~~-----------~~~~~~~~~~~~~~~~~~ygk~~------~~~~rkmGhv~ 356 (377)
T 3orq_A 294 HILAVTGQSLPNSIELLKPAVMMNLLGKD-----------LDLLENEFNEHPEWHLHIYGKSE------RKDSRKMGHMT 356 (377)
T ss_dssp HHHHHTTCCCCSCCCBSSCEEEEEEEHHH-----------HHHHGGGGGGCGGGCEEECCCSS------CCTTSEEEEEE
T ss_pred HHHHHcCCCCCccccccccEEEEEEeCcc-----------chhHHHHHhhCCCCEEEECCCCC------CCCCCeeEEEE
Confidence 99999997432202222235666776642 22334443334677777776532 12346689999
Q ss_pred EecCCHHHHHHHHHHH
Q 010065 475 AKGKDVEEAQDRAYLA 490 (519)
Q Consensus 475 ~~g~t~~ea~~~a~~~ 490 (519)
+.|+|.+++++++.+-
T Consensus 357 ~~~~~~~~~~~~~~~~ 372 (377)
T 3orq_A 357 VLTNDVNQTEQDMYAK 372 (377)
T ss_dssp EECSCHHHHHHHHHHH
T ss_pred EEcCCHHHHHHHhHHh
Confidence 9999999999988764
No 40
>3glk_A Acetyl-COA carboxylase 2; ATP binding, alternative splicing, ATP-binding, biotin, fatty acid biosynthesis, ligase, lipid synthesis, manganese; 2.10A {Homo sapiens} PDB: 3gid_A 2hjw_A 2yl2_A
Probab=100.00 E-value=5.2e-39 Score=342.56 Aligned_cols=408 Identities=17% Similarity=0.195 Sum_probs=276.6
Q ss_pred ccEEEEEeCChhHHHHHHHHHhc--------CCCcEEEEecC-----CCCCcCCCCCc-ccc----CCCCCCHHHHHHHH
Q 010065 82 RVVVLVIGGGGREHALCYALKRS--------HSCDAVFCAPG-----NAGISNSGDAT-CIP----DLDVLDGDAVISFC 143 (519)
Q Consensus 82 ~~~vliiG~g~~~~~l~~~l~~~--------~g~~~v~~~~~-----~~~~~~~~~~~-~v~----~~d~~d~~~l~~~~ 143 (519)
.+||||.|.|.....+++++++. .|++++.+... +......++.. .+. .-+..|.+.+++++
T Consensus 40 ~~kvLianrGeia~riira~r~lg~e~~~~e~gi~~Vav~s~~D~~~~a~~~~~ADe~~~i~~~~~~~sy~d~~~ii~~a 119 (540)
T 3glk_A 40 IEKVLIANNGIAAVKCMRSIRRWAYEMFRNERAIRFVVMVTPEDLKANAEYIKMADHYVPVPGGPNNNNYANVELIVDIA 119 (540)
T ss_dssp CCEEEECCCHHHHHHHHHHHHHHHHHHHSCTTSSEEEEEECHHHHHTTCHHHHHSSEEEECCCSSGGGTTTCHHHHHHHH
T ss_pred ccEEEEECChHHHHHHHHHHHHhccccccccCCcEEEEEEcCcccCcCChhHHhCCEEEEeCCCCcccccccHHHHHHHH
Confidence 46999999997666777777753 37888887421 11111112211 110 12566789999999
Q ss_pred HHcCCcEEEECC----ChhhHHHHHHHHHHCCCCeeCCcHHHHHHhcCHHHHHHHHHHcCCCCCCeee------------
Q 010065 144 RKWSVGLVVVGP----EAPLVSGLANKLVKAGIPTFGPSSEAAALEGSKNFMKNLCDKYGIPTAKYKT------------ 207 (519)
Q Consensus 144 ~~~~id~Vi~g~----E~~~~~~~a~~le~~gip~~g~~~~~~~~~~dK~~~k~~l~~~Gi~~p~~~~------------ 207 (519)
++.++|+|+|+. |++. +++.++..|+|++|++++++.++.||..+|++++++|||+|++..
T Consensus 120 ~~~~~daI~pg~gflsE~~~---~a~~le~~Gi~~iGp~~~ai~~~~DK~~~k~ll~~~GVPvp~~~~~~l~~~~~~~~~ 196 (540)
T 3glk_A 120 KRIPVQAVWAGWGHASENPK---LPELLCKNGVAFLGPPSEAMWALGDKIASTVVAQTLQVPTLPWSGSGLTVEWTEDDL 196 (540)
T ss_dssp HHTTCSEEECCSSGGGGCTH---HHHHHHHTTCEESSCCHHHHC---CHHHHHHHHHHTTCCBCCBTTTTCCCCCCCTTC
T ss_pred HHhCCCEEEeCCCccccCHH---HHHHHHHcCCceeCCCHHHHHHhCCHHHHHHHHHHcCCCCCCccccccccccccccc
Confidence 999999999963 5543 566699999999999999999999999999999999999999877
Q ss_pred -----------------cCCHHHHHHHHHHhCCCEEEEeCCCCCCCcEEEeCCHHHHHHHHHHHHhhccCCCCCCcEEEE
Q 010065 208 -----------------FTDPNAAKQYIQEEGAPIVVKADGLAAGKGVIVAMTLEEAYEAVDSMLLKNAFGSAGCRVIIE 270 (519)
Q Consensus 208 -----------------v~~~~~~~~~~~~~g~P~VvKP~~g~gs~GV~~v~~~~el~~a~~~~~~~~~~~~~~~~~lvE 270 (519)
+.+.+++.++++++|||+||||..++||+|++++++.+|+.++++.+... ..+..++||
T Consensus 197 ~~~~~~~~~~~~~~~~~v~s~~ea~~~a~~igyPvVVKp~~ggGG~Gv~iv~~~~eL~~a~~~~~~~----~~~~~vlVE 272 (540)
T 3glk_A 197 QQGKRISVPEDVYDKGCVKDVDEGLEAAERIGFPLMIKASEGGGGKGIRKAESAEDFPILFRQVQSE----IPGSPIFLM 272 (540)
T ss_dssp ----CCCCCHHHHHHTSCCSHHHHHHHHHHHCSSEEEEETTCC----EEEECSTTTHHHHHHHHHHH----STTCCEEEE
T ss_pred ccccccccccccccccCcCCHHHHHHHHHhcCCcEEEEECCCCCCCCEEEECCHHHHHHHHHHHHhh----ccCCCEEEE
Confidence 78889999999999999999999999999999999999999999988753 135789999
Q ss_pred eccCC-cEEEEEEEEeC-CeeEEeccccccccccCCCCCCCCCCceEEecCCCCCHHHHHHHHHHHHHHHHHHHHHcCCC
Q 010065 271 EFLEG-EEASFFALVDG-ENAIPLESAQDHKRVGDGDTGPNTGGMGAYSPAPVLTKELQSVVMESIILPTVKGMSAEGCK 348 (519)
Q Consensus 271 e~I~G-~E~sv~~l~dg-~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~P~~~l~~~~~~~i~~~a~~~~~~~~~a~g~~ 348 (519)
+||+| +|++|.++.|+ +.++.+..... .+.....++ ....|++.++++..+++.+.+. ++++++|+.
T Consensus 273 e~I~g~rei~V~vl~d~~G~vv~l~~rd~--s~qr~~~k~-----ie~~Pa~~l~~~~~~~l~~~a~----~~~~alG~~ 341 (540)
T 3glk_A 273 KLAQHARHLEVQILADQYGNAVSLFGRDC--SIQRRHQKI-----VEEAPATIAPLAIFEFMEQCAI----RLAKTVGYV 341 (540)
T ss_dssp ECCSSEEEEEEEEEECTTSCEEEEEEEEE--EEC---CCS-----EEEESCTTSCHHHHHHHHHHHH----HHHHHHTCC
T ss_pred EecCCCcEEEEEEEEcCCCCEEEEeceee--eeeecccce-----EEecCCCCCCHHHHHHHHHHHH----HHHHHcCCc
Confidence 99999 99999999975 34444432111 111111111 2346888679988888888764 677888876
Q ss_pred eeeEEEEEEEEEcCCCceEEEEEeCCCCCCchHHHHHHhCCCHHHHHHHHHhCCCCC-CC-----------------c--
Q 010065 349 FVGVLYAGLMIEKKSGLPKLIEYNVRFGDPECQVLMVRLESDLAEVLLAACRGELTG-VT-----------------L-- 408 (519)
Q Consensus 349 ~~G~~~vdf~~~~~g~~~~viEiN~R~G~~~~~~~~~~~G~d~~~~~i~~~~g~~~~-~~-----------------~-- 408 (519)
|++++||+++++| ++||+|||||++++.. .....+|+|++++++++++|.... .. .
T Consensus 342 --G~~~VEf~~d~dg-~~~~lEiNpR~~~~~~-vte~~tGvdl~~~~lr~a~G~pL~~~~~i~~~~~~~~~~~~~~~~~~ 417 (540)
T 3glk_A 342 --SAGTVEYLYSQDG-SFHFLELNPRLQVEHP-CTEMIADVNLPAAQLQIAMGVPLHRLKDIRLLYGESPWGVTPISFET 417 (540)
T ss_dssp --EEEEEEEEEETTS-CEEEEEEECSCCTTHH-HHHHHHTCCHHHHHHHHHTTCCGGGCHHHHHHTTCCSSCCSCCCSCC
T ss_pred --cceEEEEEEcCCC-CEEEEEEECCCCCcch-hhHhHhCCCHHHHHHHHHCCCCccccccccccccccccccccccccc
Confidence 9999999999876 8999999999988654 444567999999999999998432 00 0
Q ss_pred ----ccCCCcEEEEEEecCCCCCC--CCCCcccccchhhhccCCCeEEEEeeeeecCCCcEEe-cCCeEEEEEEecCCHH
Q 010065 409 ----NWSPGSAMVVVMASKGYPGS--YEKGSEIQNLEEAEQVAPSVKIFHAGTALDADGNFIA-TGGRVLGVTAKGKDVE 481 (519)
Q Consensus 409 ----~~~~~~a~~~~l~~~~~~~~--~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~-~~~rvg~vi~~g~t~~ 481 (519)
....++++...+..+.-... +..| .|..+.-. ..++++.+.. .. ..|.+.. .+..++.|+++|.|++
T Consensus 418 ~~~~~~~~g~aie~ri~aedp~~~f~p~~G-~i~~~~~~--~~~~v~~~~~-~~--~~~~~~~~yd~~~~k~i~~g~~r~ 491 (540)
T 3glk_A 418 PSNPPLARGHVIAARITSENPDEGFKPSSG-TVQELNFR--SSKNVWGYFS-VA--ATGGLHEFADSQFGHCFSWGENRE 491 (540)
T ss_dssp C----CCCSEEEEEEEC------------C-CEEECCCS--SCCSEEEEEE-C--------------CEEEEEEEESSHH
T ss_pred ccccCCCceeEEEEEEeccCCcccccCCce-EEEEEEcC--CCCcEEEEec-cc--cCCCCCCccCcccceEEEEcCCHH
Confidence 12347888876666531111 1111 22222110 1234443321 11 1232222 3677899999999999
Q ss_pred HHHHHHHHHhhccccCCe------eecccccccccccccccc
Q 010065 482 EAQDRAYLAVEEINWPGG------FYRRDIGWRALPQKQFAT 517 (519)
Q Consensus 482 ea~~~a~~~~~~i~~~g~------~~r~dig~~~~~~~~~~~ 517 (519)
+|++++.++++.+.+.|. |.++=+.++.|...++.|
T Consensus 492 ~a~~~~~~al~~~~i~g~~~tn~~~~~~~~~~~~f~~~~~~t 533 (540)
T 3glk_A 492 EAISNMVVALKELSIRGDFRTTVEYLINLLETESFQNNDIDT 533 (540)
T ss_dssp HHHHHHHHHHHHHTCC----HHHHHHHHHHHSHHHHHTCC--
T ss_pred HHHHHHHHHHhccEEecccCCcHHHHHHHhCChhhcCCCccc
Confidence 999999999999999993 444444455555544444
No 41
>3q2o_A Phosphoribosylaminoimidazole carboxylase, ATPase; carboxylates, ATP binding, lyase; 1.96A {Bacillus anthracis} PDB: 3qff_A* 3r5h_A*
Probab=100.00 E-value=9.7e-38 Score=322.56 Aligned_cols=362 Identities=17% Similarity=0.102 Sum_probs=271.2
Q ss_pred CCccEEEEEeCChhHHHHHHHHHhcCCCcEEEEecCCCC-CcCCCCCccccCCCCCCHHHHHHHHHHcCCcEEEECCChh
Q 010065 80 GQRVVVLVIGGGGREHALCYALKRSHSCDAVFCAPGNAG-ISNSGDATCIPDLDVLDGDAVISFCRKWSVGLVVVGPEAP 158 (519)
Q Consensus 80 ~~~~~vliiG~g~~~~~l~~~l~~~~g~~~v~~~~~~~~-~~~~~~~~~v~~~d~~d~~~l~~~~~~~~id~Vi~g~E~~ 158 (519)
...++|+|+|+|.....+++++++. |+++++++++... ....++ ..+ ..+..|.+.+.+++++ .|+|.++.|..
T Consensus 12 ~~~k~IlIlG~G~~g~~la~aa~~~-G~~vi~~d~~~~~~~~~~ad-~~~-~~~~~d~~~l~~~~~~--~dvI~~~~e~~ 86 (389)
T 3q2o_A 12 LPGKTIGIIGGGQLGRMMALAAKEM-GYKIAVLDPTKNSPCAQVAD-IEI-VASYDDLKAIQHLAEI--SDVVTYEFENI 86 (389)
T ss_dssp CTTSEEEEECCSHHHHHHHHHHHHT-TCEEEEEESSTTCTTTTTCS-EEE-ECCTTCHHHHHHHHHT--CSEEEESCCCC
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHc-CCEEEEEeCCCCCchHHhCC-ceE-ecCcCCHHHHHHHHHh--CCEeeeccccc
Confidence 3567999999998777888888866 9999999865322 122222 222 4577788899988864 68888876654
Q ss_pred hHHHHHHHHHHCCCCeeCCcHHHHHHhcCHHHHHHHHHHcCCCCCCeeecCCHHHHHHHHHHhCCCEEEEeCCCCC-CCc
Q 010065 159 LVSGLANKLVKAGIPTFGPSSEAAALEGSKNFMKNLCDKYGIPTAKYKTFTDPNAAKQYIQEEGAPIVVKADGLAA-GKG 237 (519)
Q Consensus 159 ~~~~~a~~le~~gip~~g~~~~~~~~~~dK~~~k~~l~~~Gi~~p~~~~v~~~~~~~~~~~~~g~P~VvKP~~g~g-s~G 237 (519)
.. .+++.+++.|+ +|++++++.+++||..++++|+++|||+|++..+.+.+++.++++++|||+|+||..+++ |+|
T Consensus 87 ~~-~~~~~l~~~g~--~~~~~~~~~~~~dK~~~k~~l~~~Gip~p~~~~~~~~~~~~~~~~~~g~P~vvKp~~~~~~g~G 163 (389)
T 3q2o_A 87 DY-RCLQWLEKHAY--LPQGSQLLSKTQNRFTEKNAIEKAGLPVATYRLVQNQEQLTEAIAELSYPSVLKTTTGGYDGKG 163 (389)
T ss_dssp CH-HHHHHHHHHSC--CTTCSHHHHHTTSHHHHHHHHHHTTCCCCCEEEESSHHHHHHHHHHHCSSEEEEESSCCSSSCC
T ss_pred cH-HHHHHHHhhCc--cCCCHHHHHHhcCHHHHHHHHHHCCCCCCCeEEECCHHHHHHHHHhcCCCEEEEeCCCCCCCCC
Confidence 33 45667887786 589999999999999999999999999999999999999999999999999999999975 799
Q ss_pred EEEeCCHHHHHHHHHHHHhhccCCCCCCcEEEEeccCC-cEEEEEEEEeC-CeeEEeccccccccccCCCCCCCCCCceE
Q 010065 238 VIVAMTLEEAYEAVDSMLLKNAFGSAGCRVIIEEFLEG-EEASFFALVDG-ENAIPLESAQDHKRVGDGDTGPNTGGMGA 315 (519)
Q Consensus 238 V~~v~~~~el~~a~~~~~~~~~~~~~~~~~lvEe~I~G-~E~sv~~l~dg-~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 315 (519)
+.++++.+|+.++++.+. +..+|||+||+| +|+++.+++|+ +.+..++....... .+. ....
T Consensus 164 v~~v~~~~el~~~~~~~~--------~~~~lvEe~i~g~~E~~v~~~~~~~G~~~~~~~~e~~~~-----~g~---~~~~ 227 (389)
T 3q2o_A 164 QVVLRSEADVDEARKLAN--------AAECILEKWVPFEKEVSVIVIRSVSGETKVFPVAENIHV-----NNI---LHES 227 (389)
T ss_dssp EEEESSGGGHHHHHHHHH--------HSCEEEEECCCCSEEEEEEEEECTTCCEEECCCEEEEEE-----TTE---EEEE
T ss_pred eEEECCHHHHHHHHHhcC--------CCCEEEEecccCceEEEEEEEEcCCCCEEEecCeeeEEc-----CCc---eEEE
Confidence 999999999999988763 368999999998 99999999863 23443433321111 011 1245
Q ss_pred EecCCCCCHHHHHHHHHHHHHHHHHHHHHcCCCeeeEEEEEEEEEcCCCceEEEEEeCCCCCCchHHHHHHhCCCHHHHH
Q 010065 316 YSPAPVLTKELQSVVMESIILPTVKGMSAEGCKFVGVLYAGLMIEKKSGLPKLIEYNVRFGDPECQVLMVRLESDLAEVL 395 (519)
Q Consensus 316 ~~P~~~l~~~~~~~i~~~a~~~~~~~~~a~g~~~~G~~~vdf~~~~~g~~~~viEiN~R~G~~~~~~~~~~~G~d~~~~~ 395 (519)
+.|+. ++++..+++++.+ .+++.++|+. |++++||+++++| ++||+|+|||||++.++. ...+|+|+++++
T Consensus 228 ~~p~~-l~~~~~~~~~~~a----~~~~~~lg~~--G~~~ve~~~~~dg-~~~viEiNpR~~~s~~~~-~~~~g~~~~~~~ 298 (389)
T 3q2o_A 228 IVPAR-ITEELSQKAIAYA----KVLADELELV--GTLAVEMFATADG-EIYINELAPRPHNSGHYT-QDACETSQFGQH 298 (389)
T ss_dssp EESCS-SCHHHHHHHHHHH----HHHHHHTTCC--EEEEEEEEECTTS-CEEEEEEESSCCGGGTTH-HHHBSSCHHHHH
T ss_pred ECCCC-CCHHHHHHHHHHH----HHHHHHcCCe--eEEEEEEEEeCCC-CEEEEEeeCCCCCchhHH-HHHcCCCHHHHH
Confidence 67887 8999888888876 4677888875 9999999999876 799999999999988754 456799999999
Q ss_pred HHHHhCCCCCCCcccCCCcEEEEEEecCCCCCCCCCCcccccchhhhccCCCeEEEEeeeeecCCCcEEecCCeEEEEEE
Q 010065 396 LAACRGELTGVTLNWSPGSAMVVVMASKGYPGSYEKGSEIQNLEEAEQVAPSVKIFHAGTALDADGNFIATGGRVLGVTA 475 (519)
Q Consensus 396 i~~~~g~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~rvg~vi~ 475 (519)
+++++|..... +.......+..+++.. ++.........+++.++.+|... ...+.++|+|++
T Consensus 299 ~r~~lg~~l~~-~~~~~~~~~~~~~g~~-----------~~~~~~~~~~~p~~~~~lygk~~------~~~~r~~G~v~~ 360 (389)
T 3q2o_A 299 IRAICNLPLGE-TNLLKPVVMVNILGEH-----------IEGVLRQVNRLTGCYLHLYGKEE------AKAQRKMGHVNI 360 (389)
T ss_dssp HHHHHTCCCCC-CCBCSCEEEEEEEHHH-----------HHHHHHTGGGCTTEEEEECCCSS------CCTTSEEEEEEE
T ss_pred HHHHcCCCCCC-ccccCcEEEEEEecCc-----------hhhHHHHHHhCCCCEEEECCCCC------CCCCCeeEEEEE
Confidence 99999984322 2222224444544321 12222222224677777766532 123567899999
Q ss_pred ecCCHHHHHHHHHHHhh
Q 010065 476 KGKDVEEAQDRAYLAVE 492 (519)
Q Consensus 476 ~g~t~~ea~~~a~~~~~ 492 (519)
.|+|.++|.+++..+.-
T Consensus 361 ~~~~~~~a~~~a~~~~~ 377 (389)
T 3q2o_A 361 LNDNIEVALEKAKSLHI 377 (389)
T ss_dssp ECSSHHHHHHHHHHTTS
T ss_pred EcCCHHHHHHHHHHhCc
Confidence 99999999999988743
No 42
>3u9t_A MCC alpha, methylcrotonyl-COA carboxylase, alpha-subunit; biotin carboxylase, carboxyltransferase, BT domain, BCCP DOM ligase; 2.90A {Pseudomonas aeruginosa} PDB: 3u9s_A
Probab=100.00 E-value=3.8e-39 Score=352.17 Aligned_cols=390 Identities=21% Similarity=0.243 Sum_probs=276.8
Q ss_pred ccEEEEEeCChhHHHHHHHHHhcCCCcEEEEecC-CCCC--cCCCCCcc-cc----CCCCCCHHHHHHHHHHcCCcEEEE
Q 010065 82 RVVVLVIGGGGREHALCYALKRSHSCDAVFCAPG-NAGI--SNSGDATC-IP----DLDVLDGDAVISFCRKWSVGLVVV 153 (519)
Q Consensus 82 ~~~vliiG~g~~~~~l~~~l~~~~g~~~v~~~~~-~~~~--~~~~~~~~-v~----~~d~~d~~~l~~~~~~~~id~Vi~ 153 (519)
.+||||+|.|.....+++++++. |++++.++++ +... ...++... +. ..+..|.+.+++++++.++|+|+|
T Consensus 28 ~~kILI~g~Geia~~iiraar~l-Gi~~vav~s~~d~~a~~~~~AD~~~~i~~~~~~~syld~~~i~~~a~~~~~daI~p 106 (675)
T 3u9t_A 28 IQRLLVANRGEIACRVMRSARAL-GIGSVAVHSDIDRHARHVAEADIAVDLGGAKPADSYLRGDRIIAAALASGAQAIHP 106 (675)
T ss_dssp CSEEEECCCHHHHHHHHHHHHHH-TCEEEEEECSGGGGCHHHHTCSEEEECCCSSGGGTTTCHHHHHHHHHHTTCSEEEC
T ss_pred CCEEEEECCCHHHHHHHHHHHHC-CCEEEEEECCCCCCchhHhhCCEEEEcCCCccccCccCHHHHHHHHHHhCcCEEEe
Confidence 36899999997777788888777 9999988644 2111 11111111 10 125567899999999999999999
Q ss_pred CC----ChhhHHHHHHHHHHCCCCeeCCcHHHHHHhcCHHHHHHHHHHcCCCCCCeee--cCCHHHHHHHHHHhCCCEEE
Q 010065 154 GP----EAPLVSGLANKLVKAGIPTFGPSSEAAALEGSKNFMKNLCDKYGIPTAKYKT--FTDPNAAKQYIQEEGAPIVV 227 (519)
Q Consensus 154 g~----E~~~~~~~a~~le~~gip~~g~~~~~~~~~~dK~~~k~~l~~~Gi~~p~~~~--v~~~~~~~~~~~~~g~P~Vv 227 (519)
+. |+. .+++.+++.|++++|++++++..+.||..+|++++++|||+|++.. +.+.+++.++++++|||+|+
T Consensus 107 g~gflsE~~---~~a~~le~~Gi~~iGp~~~ai~~~~DK~~~k~~l~~~GVpvpp~~~~~~~s~~e~~~~a~~igyPvvv 183 (675)
T 3u9t_A 107 GYGFLSENA---DFARACEEAGLLFLGPPAAAIDAMGSKSAAKALMEEAGVPLVPGYHGEAQDLETFRREAGRIGYPVLL 183 (675)
T ss_dssp CSSTTTTCH---HHHHHHHTTTCEESSCCHHHHHHHTSHHHHHHHHHHTTCCBCCCCCSCCCCTTHHHHHHHHSCSSBCC
T ss_pred CCcccccCH---HHHHHHHHcCCceeCCCHHHHHHhchHHHHHHHHHHcCcCcCCccccCCCCHHHHHHHHHhCCCcEEE
Confidence 63 554 4677799999999999999999999999999999999999999875 77899999999999999999
Q ss_pred EeCCCCCCCcEEEeCCHHHHHHHHHHHHhh--ccCCCCCCcEEEEeccCC-cEEEEEEEEeCC-eeEEeccccccccccC
Q 010065 228 KADGLAAGKGVIVAMTLEEAYEAVDSMLLK--NAFGSAGCRVIIEEFLEG-EEASFFALVDGE-NAIPLESAQDHKRVGD 303 (519)
Q Consensus 228 KP~~g~gs~GV~~v~~~~el~~a~~~~~~~--~~~~~~~~~~lvEe~I~G-~E~sv~~l~dg~-~~~~~~~~~~~~~~~~ 303 (519)
||..|+||+|++++++.+|+.++++.+... ..| .++.++||+||+| +|+++.++.|+. +++.+...... ...
T Consensus 184 Kp~~G~Gg~Gv~iv~~~~el~~a~~~~~~ea~~~f--g~~~vlvEeyI~g~reiev~v~~d~~G~vv~l~~rd~s--~qr 259 (675)
T 3u9t_A 184 KAAAGGGGKGMKVVEREAELAEALSSAQREAKAAF--GDARMLVEKYLLKPRHVEIQVFADRHGHCLYLNERDCS--IQR 259 (675)
T ss_dssp BCCC------CCCBCCTTTHHHHHSCCCC----------CCCBCCBCCSSCBCEEEEEEECSSSCEEEEEEEECC--CBS
T ss_pred EECCCCCCccEEEECCHHHHHHHHHHHHHHHHHhc--CCCcEEEEeecCCCcEEEEEEEEcCCCCEEEEeccccc--eee
Confidence 999999999999999999999988765421 112 1468999999999 899999998753 44444321100 000
Q ss_pred CCCCCCCCCceEEecCCCCCHHHHHHHHHHHHHHHHHHHHHcCCCeeeEEEEEEEEEcCCCceEEEEEeCCCCCCchHHH
Q 010065 304 GDTGPNTGGMGAYSPAPVLTKELQSVVMESIILPTVKGMSAEGCKFVGVLYAGLMIEKKSGLPKLIEYNVRFGDPECQVL 383 (519)
Q Consensus 304 ~~~~~~~g~~~~~~P~~~l~~~~~~~i~~~a~~~~~~~~~a~g~~~~G~~~vdf~~~~~g~~~~viEiN~R~G~~~~~~~ 383 (519)
... ......|++.++++..+++.+.+. ++++++|+. |++++||+++++| ++||+|+|||++++.. ..
T Consensus 260 ~~q-----k~ie~~Pa~~l~~~~~~~l~~~a~----~~~~alg~~--G~~~vEf~~~~dG-~~~~iEiNpR~~~~~~-~t 326 (675)
T 3u9t_A 260 RHQ-----KVVEEAPAPGLGAELRRAMGEAAV----RAAQAIGYV--GAGTVEFLLDERG-QFFFMEMNTRLQVEHP-VT 326 (675)
T ss_dssp SSS-----BCEEEESCSSCCHHHHHHHHHHHH----HHHHHTTCC--SEEEEECCBCTTS-CBCBCEEESSCCTTHH-HH
T ss_pred ccc-----eEEEECCCCCCCHHHHHHHHHHHH----HHHHHcCCc--cceEEEEEEcCCC-CEEEEeccccccCCch-hh
Confidence 001 123456887789998888888774 577888875 9999999999876 8999999999987543 44
Q ss_pred HHHhCCCHHHHHHHHHhCCCCCCCc-c-cCCCcEEEEEEecCCCCCC--CCCCcccccchhhhccCCCeEEEEeeeeecC
Q 010065 384 MVRLESDLAEVLLAACRGELTGVTL-N-WSPGSAMVVVMASKGYPGS--YEKGSEIQNLEEAEQVAPSVKIFHAGTALDA 459 (519)
Q Consensus 384 ~~~~G~d~~~~~i~~~~g~~~~~~~-~-~~~~~a~~~~l~~~~~~~~--~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~ 459 (519)
...+|+|++++++++++|...+... . ...++++.+.+........ +..| .+..+.... ..+++++... . .
T Consensus 327 e~~tGvdl~~~~l~~a~G~~l~~~~~~~~~~g~ai~~ri~aedp~~~f~P~~G-~l~~~~~p~-~~~gvr~d~~-~---~ 400 (675)
T 3u9t_A 327 EAITGLDLVAWQIRVARGEALPLTQEQVPLNGHAIEVRLYAEDPEGDFLPASG-RLMLYREAA-AGPGRRVDSG-V---R 400 (675)
T ss_dssp HHTTTCCHHHHHHHHHTTCCCSCCTTTCCCCSEEEEEEEESCCTTTTSCCCCC-BCSEEECCC-CCTTEEEEES-C---C
T ss_pred hhhcCCCHHHHHHHHHCCCCCCCCccccccCcceeEEEEEeccCcccccCCCC-EEEEEECCC-CCCCEEEEec-c---c
Confidence 4557999999999999998433221 1 2246777776666432111 1111 122222110 1245544422 1 1
Q ss_pred CCcEEe--cCCeEEEEEEecCCHHHHHHHHHHHhhccccCC
Q 010065 460 DGNFIA--TGGRVLGVTAKGKDVEEAQDRAYLAVEEINWPG 498 (519)
Q Consensus 460 ~g~~~~--~~~rvg~vi~~g~t~~ea~~~a~~~~~~i~~~g 498 (519)
.|...+ .+.+++.|++.|+|+++|++++.++++.+++.|
T Consensus 401 ~G~~v~~~~ds~la~vi~~g~~r~~a~~~~~~al~~~~i~g 441 (675)
T 3u9t_A 401 EGDEVSPFYDPMLAKLIAWGETREEARQRLLAMLAETSVGG 441 (675)
T ss_dssp TTCBCCTTSCCEEEEEEEEESSHHHHHHHHHHHHHTCEEES
T ss_pred CCCEeCCCCCCceEEEEEEeCCHHHHHHHHHHHhhcEEEEC
Confidence 333222 356999999999999999999999999999999
No 43
>2z04_A Phosphoribosylaminoimidazole carboxylase ATPase subunit; purine nucleotide biosynthetic pathway, structural genomics, NPPSFA; 2.35A {Aquifex aeolicus}
Probab=100.00 E-value=2.7e-38 Score=323.99 Aligned_cols=358 Identities=18% Similarity=0.150 Sum_probs=216.3
Q ss_pred ccEEEEEeCChhHHHHHHHHHhcCCCcEEEEecCCCCC-cCCCCCccccCCCCCCHHHHHHHHHHcCCcEEEECCChhhH
Q 010065 82 RVVVLVIGGGGREHALCYALKRSHSCDAVFCAPGNAGI-SNSGDATCIPDLDVLDGDAVISFCRKWSVGLVVVGPEAPLV 160 (519)
Q Consensus 82 ~~~vliiG~g~~~~~l~~~l~~~~g~~~v~~~~~~~~~-~~~~~~~~v~~~d~~d~~~l~~~~~~~~id~Vi~g~E~~~~ 160 (519)
+++|+|+|+|.....+++++++. |++++.+++++... ....+ ..+ ..+ .+.+++ .++|+|+++.|+...
T Consensus 1 M~~Ililg~g~~~~~~~~a~~~~-G~~v~~~~~~~~~~~~~~~~-~~~-~~~-----~l~~~~--~~~d~v~~~~e~~~~ 70 (365)
T 2z04_A 1 MLTVGILGGGQLGWMTILEGRKL-GFKFHVLEDKENAPACRVAD-RCF-RTG-----QISEFV--DSCDIITYEFEHIKD 70 (365)
T ss_dssp -CEEEEECCSHHHHHHHHHHGGG-TCEEEEECSSSSCHHHHHSS-EEE-CGG-----GHHHHH--HHCSEEEESSSCCCH
T ss_pred CCEEEEECCCHHHHHHHHHHHHC-CCEEEEEeCCCCCchhhhcc-cee-eHH-----HHHHHh--hcCCEEEECCCCCcH
Confidence 36899999995556678888776 99999887653221 11111 111 112 567777 579999998888765
Q ss_pred HHHHHHHHHCCCCeeCCcHHHHHHhcCHHHHHHHHHHcCCCCCCeeecCCHHHHHHHHHHhCCCEEEEeCCCC-CCCcEE
Q 010065 161 SGLANKLVKAGIPTFGPSSEAAALEGSKNFMKNLCDKYGIPTAKYKTFTDPNAAKQYIQEEGAPIVVKADGLA-AGKGVI 239 (519)
Q Consensus 161 ~~~a~~le~~gip~~g~~~~~~~~~~dK~~~k~~l~~~Gi~~p~~~~v~~~~~~~~~~~~~g~P~VvKP~~g~-gs~GV~ 239 (519)
.+++.++. ++|++++++.+++||..++++|+++|||+|++..++ .+++.+++++++||+|+||..++ +|+||.
T Consensus 71 -~~~~~l~~----~~g~~~~~~~~~~dK~~~~~~l~~~gip~p~~~~~~-~~~~~~~~~~~~~P~vvKp~~~~~~g~Gv~ 144 (365)
T 2z04_A 71 -EVLEKCES----KLIPNPQALYVKKSRIREKLFLKKHGFPVPEFLVIK-RDEIIDALKSFKLPVVIKAEKLGYDGKGQY 144 (365)
T ss_dssp -HHHHHHTT----TBSSCTHHHHHHTCHHHHHHHHHTTTCCCCCEEEC---------------CEEEECC----------
T ss_pred -HHHHHHhh----hcCCCHHHHHHhhCHHHHHHHHHHcCCCCCCEEEEc-HHHHHHHHHhcCCCEEEEEcCCCcCCCCeE
Confidence 35455543 559999999999999999999999999999999998 88888888889999999999999 999999
Q ss_pred EeCCHHHHHHHHHHHHhhccCCCCCCcEEEEeccC-CcEEEEEEEEeC-CeeEEeccccccccccCCCCCCCCCCceEEe
Q 010065 240 VAMTLEEAYEAVDSMLLKNAFGSAGCRVIIEEFLE-GEEASFFALVDG-ENAIPLESAQDHKRVGDGDTGPNTGGMGAYS 317 (519)
Q Consensus 240 ~v~~~~el~~a~~~~~~~~~~~~~~~~~lvEe~I~-G~E~sv~~l~dg-~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 317 (519)
++++.+|+.++++.++ .+..++|||||+ |+|+++.+++|+ +.+..++....+.+...+ ...+.
T Consensus 145 ~v~~~~el~~~~~~~~-------~~~~~lvEe~i~~g~e~sv~~~~d~~G~~~~~~~~~~~~~~~~~--------~~~~~ 209 (365)
T 2z04_A 145 RIKKLEDANQVVKNHD-------KEESFIIEEFVKFEAEISCIGVRDREGKTYFYPQPFNKHEEGIL--------IYNYV 209 (365)
T ss_dssp ---------------------------CEEEECCCCSEEEEEEEEECTTCCEEECCEEEEEEETTEE--------EEEEE
T ss_pred EECCHHHHHHHHHHhc-------cCCCEEEEccCCCCEEEEEEEEECCCCCEEEECCEEEEEeCCEe--------EEEEC
Confidence 9999999999988764 246899999999 899999999864 345544443332221110 12466
Q ss_pred cCCCCCHHHHHHHHHHHHHHHHHHHHHcCCCeeeEEEEEEEEEcCCCceEEEEEeCCCCCCchHHHHHHhCCCHHHHHHH
Q 010065 318 PAPVLTKELQSVVMESIILPTVKGMSAEGCKFVGVLYAGLMIEKKSGLPKLIEYNVRFGDPECQVLMVRLESDLAEVLLA 397 (519)
Q Consensus 318 P~~~l~~~~~~~i~~~a~~~~~~~~~a~g~~~~G~~~vdf~~~~~g~~~~viEiN~R~G~~~~~~~~~~~G~d~~~~~i~ 397 (519)
|++ +.+ ++.+.+ .+++.++|+. |++++||+++++| ++|++|+|||||++.++.+ ..+|.|.++.+++
T Consensus 210 p~~-~~~----~~~~~~----~~~~~~lg~~--G~~~vd~~~~~~g-~~~~iEiN~R~~~~~~~~~-~~~~~~~~~~~~~ 276 (365)
T 2z04_A 210 PYA-KLK----EAEEIT----KRLMELLDIV--GVFTVEFFLLKDG-RVLINEFAPRVHNTGHWTL-DGAYTSQFENLLR 276 (365)
T ss_dssp EEE-CCH----HHHHHH----HHHHHHTTCC--EEEEEEEEECTTS-CEEEEEEESSCCGGGTTHH-HHBSSCHHHHHHH
T ss_pred CHh-HHH----HHHHHH----HHHHHHcCCE--EEEEEEEEEeCCC-cEEEEEeccCcCCCceEEe-eccccCHHHHHHH
Confidence 776 433 344443 3456778875 9999999999876 7999999999998777533 4569999999999
Q ss_pred HHhCCCCCCCcccCCCcEEEEEEecCCCCCCCCCCcccccchhhhccCCCeEEEEeeeeecCCCcEEecCCeEEEEEEec
Q 010065 398 ACRGELTGVTLNWSPGSAMVVVMASKGYPGSYEKGSEIQNLEEAEQVAPSVKIFHAGTALDADGNFIATGGRVLGVTAKG 477 (519)
Q Consensus 398 ~~~g~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~rvg~vi~~g 477 (519)
.++|......... ..+++..+++..+||. .+ +++.. .+++.++..| ...+.+.++|+|++.|
T Consensus 277 ~~~g~~l~~~~~~-~~~~~~~~~~~~~~~~------~~---~~~~~-~~~~~~~~~g-------~~~~~~~~lg~v~~~g 338 (365)
T 2z04_A 277 AITEMPLGSTELK-LPSGMVNILGKSYEEI------PL---KEILS-VEGAKLYWYG-------KEKKPRRKVGHVNVVG 338 (365)
T ss_dssp HHTTCCCCCCCBS-SCEEEEEEESCCGGGS------CH---HHHTT-STTEEEEECC-------CCCCTTCEEEEEEEEC
T ss_pred HHhCCCCCCcccc-CCEEEEEEECCccccc------hH---HHHhc-CCCCEEEecC-------CCCCCCCeEEEEEEec
Confidence 9988743322222 2356666766655541 12 22222 2454443333 2234567788999999
Q ss_pred CCHHHHHHHHHHHhhccccCCeee
Q 010065 478 KDVEEAQDRAYLAVEEINWPGGFY 501 (519)
Q Consensus 478 ~t~~ea~~~a~~~~~~i~~~g~~~ 501 (519)
+|.++|+++++++++.|+++|.-+
T Consensus 339 ~~~~~a~~~~~~~~~~i~~~~~~~ 362 (365)
T 2z04_A 339 RSKEEVVEKVERVFTLLKGSREKL 362 (365)
T ss_dssp SSHHHHHHHHHHHHHC--------
T ss_pred CCHHHHHHHHHHHHHHhhhccCCC
Confidence 999999999999999999998643
No 44
>1iow_A DD-ligase, DDLB, D-ALA\:D-Ala ligase; glycogen phosphorylase, cell WALL, peptidoglycan synthesis, vancomycin, ADP binding; HET: ADP PHY; 1.90A {Escherichia coli} SCOP: c.30.1.2 d.142.1.1 PDB: 1iov_A* 2dln_A* 3v4z_A*
Probab=100.00 E-value=6.1e-39 Score=320.51 Aligned_cols=285 Identities=20% Similarity=0.221 Sum_probs=229.5
Q ss_pred ceeEEEeeccCCCCCcccccCCCCCCCccEEEEEeCChhHHHHHHHHHhcCCCcEEEEecCCCCCcCCCCCccccCCCCC
Q 010065 55 SFFSTVKCLAQKSQPSVSVNAPTNAGQRVVVLVIGGGGREHALCYALKRSHSCDAVFCAPGNAGISNSGDATCIPDLDVL 134 (519)
Q Consensus 55 ~~~i~v~~GG~s~e~~vS~~s~~~~~~~~~vliiG~g~~~~~l~~~l~~~~g~~~v~~~~~~~~~~~~~~~~~v~~~d~~ 134 (519)
+|||+|++||.|.||++|+.|+.. ++.++++. |++++.+++++... ..
T Consensus 2 ~~~i~il~gg~s~e~~~s~~~~~~------------------l~~al~~~-G~~v~~~~~~~~~~------~~------- 49 (306)
T 1iow_A 2 TDKIAVLLGGTSAEREVSLNSGAA------------------VLAGLREG-GIDAYPVDPKEVDV------TQ------- 49 (306)
T ss_dssp CCEEEEECCCSSTTHHHHHHHHHH------------------HHHHHHHT-TCEEEEECTTTSCG------GG-------
T ss_pred CcEEEEEeCCCCccceEcHHhHHH------------------HHHHHHHC-CCeEEEEecCchHH------HH-------
Confidence 479999999999999999987654 68888776 99998886542110 00
Q ss_pred CHHHHHHHHHHcCCcEEEEC-----CChhhHHHHHHHHHHCCCCeeCCcHHHHHHhcCHHHHHHHHHHcCCCCCCeeecC
Q 010065 135 DGDAVISFCRKWSVGLVVVG-----PEAPLVSGLANKLVKAGIPTFGPSSEAAALEGSKNFMKNLCDKYGIPTAKYKTFT 209 (519)
Q Consensus 135 d~~~l~~~~~~~~id~Vi~g-----~E~~~~~~~a~~le~~gip~~g~~~~~~~~~~dK~~~k~~l~~~Gi~~p~~~~v~ 209 (519)
+...++|+|++. +|++.++ ..++.+|+|++|++++++.+++||..++++|+++|||+|++..+.
T Consensus 50 --------~~~~~~d~v~~~~~~~~~e~~~~~---~~~e~~g~~~~g~~~~~~~~~~dK~~~~~~l~~~gi~~p~~~~~~ 118 (306)
T 1iow_A 50 --------LKSMGFQKVFIALHGRGGEDGTLQ---GMLELMGLPYTGSGVMASALSMDKLRSKLLWQGAGLPVAPWVALT 118 (306)
T ss_dssp --------TTTTTEEEEEECCCSTTTSSSHHH---HHHHHHTCCBSSCCHHHHHHHHCHHHHHHHHHHTTCCBCCEEEEE
T ss_pred --------hhccCCCEEEEcCCCCCCcchHHH---HHHHHcCCCccCCCHHHHHHHcCHHHHHHHHHHCCCCCCCeEEEc
Confidence 112578999984 3777554 458889999999999999999999999999999999999999988
Q ss_pred CHHHHHH--------HHHHhCCCEEEEeCCCCCCCcEEEeCCHHHHHHHHHHHHhhccCCCCCCcEEEEeccCCcEEEEE
Q 010065 210 DPNAAKQ--------YIQEEGAPIVVKADGLAAGKGVIVAMTLEEAYEAVDSMLLKNAFGSAGCRVIIEEFLEGEEASFF 281 (519)
Q Consensus 210 ~~~~~~~--------~~~~~g~P~VvKP~~g~gs~GV~~v~~~~el~~a~~~~~~~~~~~~~~~~~lvEe~I~G~E~sv~ 281 (519)
+. ++.+ +.++++||+|+||..+++|.||.++++.+|+.++++.++. .+..++|||||+|+|+++.
T Consensus 119 ~~-~~~~~~~~~~~~~~~~~~~p~vvKP~~g~~~~gv~~v~~~~el~~~~~~~~~------~~~~~lvee~i~g~e~~v~ 191 (306)
T 1iow_A 119 RA-EFEKGLSDKQLAEISALGLPVIVKPSREGSSVGMSKVVAENALQDALRLAFQ------HDEEVLIEKWLSGPEFTVA 191 (306)
T ss_dssp HH-HHHHCCCTHHHHHHHTTCSSEEEEETTCCTTTTCEEESSGGGHHHHHHHHTT------TCSEEEEEECCCCCEEEEE
T ss_pred hh-hhhccchhhhhhHHhccCCCEEEEeCCCCCCCCEEEeCCHHHHHHHHHHHHh------hCCCEEEEeCcCCEEEEEE
Confidence 77 6665 6778999999999999999999999999999999988752 3578999999999999999
Q ss_pred EEEeCCeeEEeccccccccccCCCCCCCCCCceEEecCCCCCHHHHHHHHHHHHHHHHHHHHHcCCCeeeEEEEEEEEEc
Q 010065 282 ALVDGENAIPLESAQDHKRVGDGDTGPNTGGMGAYSPAPVLTKELQSVVMESIILPTVKGMSAEGCKFVGVLYAGLMIEK 361 (519)
Q Consensus 282 ~l~dg~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~P~~~l~~~~~~~i~~~a~~~~~~~~~a~g~~~~G~~~vdf~~~~ 361 (519)
++ +| .++++........+++++.+++.|++.+..|+. ++++..+++.+.+ .++++++|+. |++++||++++
T Consensus 192 ~~-~g-~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~p~~-l~~~~~~~i~~~a----~~~~~~lg~~--G~~~vD~~~~~ 262 (306)
T 1iow_A 192 IL-GE-EILPSIRIQPSGTFYDYEAKFLSDETQYFCPAG-LEASQEANLQALV----LKAWTTLGCK--GWGRIDVMLDS 262 (306)
T ss_dssp EE-TT-EECCCEEEECSSSSSCHHHHHTCSCCEEESSCC-CCHHHHHHHHHHH----HHHHHHHTCC--SEEEEEEEECT
T ss_pred EE-CC-CccceEEEEeCCCeEchhheecCCCeeEEcCCC-CCHHHHHHHHHHH----HHHHHHcCCc--eEEEEEEEEcC
Confidence 88 54 343333332333455555566677788888998 8988888888766 4677888985 99999999998
Q ss_pred CCCceEEEEEeCCCCCCchHHHH----HHhCCCHHHHHHHHHh
Q 010065 362 KSGLPKLIEYNVRFGDPECQVLM----VRLESDLAEVLLAACR 400 (519)
Q Consensus 362 ~g~~~~viEiN~R~G~~~~~~~~----~~~G~d~~~~~i~~~~ 400 (519)
+| ++|++|||+|||++.+ +++ ..+|+|+.+++.+++.
T Consensus 263 ~g-~~~~iEiN~rpg~~~~-s~~p~~~~~~G~~~~~~~~~~~~ 303 (306)
T 1iow_A 263 DG-QFYLLEANTSPGMTSH-SLVPMAARQAGMSFSQLVVRILE 303 (306)
T ss_dssp TS-CEEEEEEESSCCCSTT-CHHHHHHHHTTCCHHHHHHHHHH
T ss_pred CC-CEEEEEecCCCCCCCC-CHHHHHHHHcCCCHHHHHHHHHH
Confidence 77 7999999999998765 333 3459999999998765
No 45
>3va7_A KLLA0E08119P; carboxylase, ligase; HET: BTI; 2.60A {Kluyveromyces lactis}
Probab=100.00 E-value=5.8e-38 Score=359.35 Aligned_cols=409 Identities=15% Similarity=0.178 Sum_probs=233.3
Q ss_pred ccEEEEEeCChhHHHHHHHHHhcCCCcEEEEecCCC--CC-cCCCCCcc-cc----CCCCCCHHHHHHHHHHcCCcEEEE
Q 010065 82 RVVVLVIGGGGREHALCYALKRSHSCDAVFCAPGNA--GI-SNSGDATC-IP----DLDVLDGDAVISFCRKWSVGLVVV 153 (519)
Q Consensus 82 ~~~vliiG~g~~~~~l~~~l~~~~g~~~v~~~~~~~--~~-~~~~~~~~-v~----~~d~~d~~~l~~~~~~~~id~Vi~ 153 (519)
.+||||+|.|.....+++++++. |++++.++.+.. .. ...++... +. .-+..|.+.+++++++.++|+|+|
T Consensus 31 ~kkILI~grGeia~~iiraar~l-Gi~vVaV~s~~d~~a~~~~~ADe~~~i~p~~~~~syld~~~Il~~a~~~~iDaI~p 109 (1236)
T 3va7_A 31 FETVLIANRGEIAVRIMKTLKRM-GIKSVAVYSDPDKYSQHVTDADFSVALHGRTAAETYLDIDKIINAAKKTGAQAIIP 109 (1236)
T ss_dssp CSEEEECCCHHHHHHHHHHHHHH-TCEEEEEECSGGGGCHHHHHSSEEEECCCSSTTTTTTCHHHHHHHHHHTTCSEEEC
T ss_pred CCEEEEEcCCHHHHHHHHHHHHC-CCEEEEEEcCCCcCchhhhhCCEEEEeCCCcccccccCHHHHHHHHHHhCCCEEEE
Confidence 46899999997777788888877 999988854311 11 11111111 10 124567899999999999999999
Q ss_pred CCChhh-HHHHHHHHHHCCCCeeCCcHHHHHHhcCHHHHHHHHHHcCCCCCC-eeecCCHHHHHHHHHHhCCCEEEEeCC
Q 010065 154 GPEAPL-VSGLANKLVKAGIPTFGPSSEAAALEGSKNFMKNLCDKYGIPTAK-YKTFTDPNAAKQYIQEEGAPIVVKADG 231 (519)
Q Consensus 154 g~E~~~-~~~~a~~le~~gip~~g~~~~~~~~~~dK~~~k~~l~~~Gi~~p~-~~~v~~~~~~~~~~~~~g~P~VvKP~~ 231 (519)
+.+... ...+++.+++.|++++|++++++.++.||..+|++++++|||+|+ +..+.+.+++.++++++|||+||||..
T Consensus 110 g~g~lsEn~~~a~~le~~Gi~~iGps~eai~~~~DK~~ak~ll~~aGIPvpp~~~~v~s~eea~~~a~~iGyPvVVKP~~ 189 (1236)
T 3va7_A 110 GYGFLSENADFSDRCSQENIVFVGPSGDAIRKLGLKHSAREIAERAKVPLVPGSGLIKDAKEAKEVAKKLEYPVMVKSTA 189 (1236)
T ss_dssp CSSGGGGCHHHHHHHHTTTCEESSCCHHHHHHHHSTTHHHHHHHHTTCCCCC----------------------------
T ss_pred CCccccccHHHHHHHHHCCCCeeCCCHHHHHHhcCHHHHHHHHHHcCCCCCCeeEecCCHHHHHHHHHHcCCCEEEEeCC
Confidence 642111 125678899999999999999999999999999999999999988 467888889988899999999999999
Q ss_pred CCCCCcEEEeCCHHHHHHHHHHHHhh--ccCCCCCCcEEEEeccCC-cEEEEEEEEeCC-eeEEeccccccccccCCCCC
Q 010065 232 LAAGKGVIVAMTLEEAYEAVDSMLLK--NAFGSAGCRVIIEEFLEG-EEASFFALVDGE-NAIPLESAQDHKRVGDGDTG 307 (519)
Q Consensus 232 g~gs~GV~~v~~~~el~~a~~~~~~~--~~~~~~~~~~lvEe~I~G-~E~sv~~l~dg~-~~~~~~~~~~~~~~~~~~~~ 307 (519)
++||+||+++++.+|+.++++.+... ..+ .+..++|||||+| +|+++.++.|+. .++.+.... . .......
T Consensus 190 GgGGkGV~iv~s~eEL~~a~~~~~~~a~~~~--~~~~vlVEeyI~G~rEisV~vl~Dg~g~vv~l~~rd-~-s~qr~~~- 264 (1236)
T 3va7_A 190 GGGGIGLQKVDSEDDIERVFETVQHQGKSYF--GDAGVFMERFVNNARHVEIQMMGDGFGKAIAIGERD-C-SLQRRNQ- 264 (1236)
T ss_dssp ---------------------------------------------CCEEEEEEEEEESSSCEEEEEEEE-E-EEEETTE-
T ss_pred CCCCCCEEEECCHHHHHHHHHHHHHHHHhcc--CCCcEEEeeccCCCeEEEEEEEecCCceEEEEeeee-e-eeeecCc-
Confidence 99999999999999999999887532 112 2467999999999 999999999875 444443211 1 0111111
Q ss_pred CCCCCceEEecCCCCCHHHHHHHHHHHHHHHHHHHHHcCCCeeeEEEEEEEEEcCCCceEEEEEeCCCCCCchHHHHHHh
Q 010065 308 PNTGGMGAYSPAPVLTKELQSVVMESIILPTVKGMSAEGCKFVGVLYAGLMIEKKSGLPKLIEYNVRFGDPECQVLMVRL 387 (519)
Q Consensus 308 ~~~g~~~~~~P~~~l~~~~~~~i~~~a~~~~~~~~~a~g~~~~G~~~vdf~~~~~g~~~~viEiN~R~G~~~~~~~~~~~ 387 (519)
......|++.++++..+++.+.+. ++++++|+. |++++||+++++++++||||||||++++.. .....+
T Consensus 265 ----k~~e~~Pa~~l~~~~~~~l~~~a~----~~~~alg~~--G~~~VEfivd~d~g~~y~iEINpRl~g~~~-~te~vt 333 (1236)
T 3va7_A 265 ----KVIEETPAPNLPEATRAKMRAASE----RLGSLLKYK--CAGTVEFIYDEQRDEFYFLEVNARLQVEHP-ITEMVT 333 (1236)
T ss_dssp ----EEEEEESCSSCCHHHHHHHHHHHH----HHHHHTTCE--EEEEEEEEEETTTTEEEEEEEECSCCTTHH-HHHHHH
T ss_pred ----ceEEEcCCCCCCHHHHHHHHHHHH----HHHHHcCCc--ceEEEEEEEECCCCcEEEEEEECCCCCccH-HHHHHH
Confidence 124467887689999888888774 577788866 999999999985337999999999987553 444457
Q ss_pred CCCHHHHHHHHHhCCCCCCC-ccc-CCCcEEEEEEecCCCCCCC-CCCcccccchhhhccCCCeEEEEeeeeecCCCcEE
Q 010065 388 ESDLAEVLLAACRGELTGVT-LNW-SPGSAMVVVMASKGYPGSY-EKGSEIQNLEEAEQVAPSVKIFHAGTALDADGNFI 464 (519)
Q Consensus 388 G~d~~~~~i~~~~g~~~~~~-~~~-~~~~a~~~~l~~~~~~~~~-~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 464 (519)
|+|+.++++++++|...+.. ..+ ..++++.+.+.+..+...+ ...-.+..+. .+.++++... . ..|...
T Consensus 334 GvDlv~~~l~~a~G~~l~~~~~~~~~~g~Ai~~riyaedp~~~f~p~~G~i~~~~----~p~gvrvd~~-v---~~G~~V 405 (1236)
T 3va7_A 334 GLDLVEWMLRIAANDSPDFDNTKIEVSGASIEARLYAENPVKDFRPSPGQLTSVS----FPSWARVDTW-V---KKGTNV 405 (1236)
T ss_dssp CCCHHHHHHHHHTTCCCCGGGCCCCCCSEEEEEEEESEETTTTTEECCEECCEEE----CCTTSEEEEC-C---CTTCEE
T ss_pred CCCHHHHHHHHHCCCCCCCccccccccceEEEEEEecCCcccccCCCCceEEEEE----cCCccEeccc-c---cCCCEe
Confidence 99999999999999865432 122 3467777766654321111 0000111111 1233333221 1 234333
Q ss_pred e--cCCeEEEEEEecCCHHHHHHHHHHHhhccccCCe-----eecccccccccccccc
Q 010065 465 A--TGGRVLGVTAKGKDVEEAQDRAYLAVEEINWPGG-----FYRRDIGWRALPQKQF 515 (519)
Q Consensus 465 ~--~~~rvg~vi~~g~t~~ea~~~a~~~~~~i~~~g~-----~~r~dig~~~~~~~~~ 515 (519)
+ .+.+++.|++.|+|+++|+++++++++.++++|. |.|+-+.++.|...++
T Consensus 406 ~~~yds~la~vi~~g~~r~eA~~~~~~al~~~~i~G~~tn~~~~~~~~~~~~f~~~~~ 463 (1236)
T 3va7_A 406 SAEYDPTLAKIIVHGKDRNDAIMKLNQALNETAVYGCITNIDYLRSIASSKMFKEAKV 463 (1236)
T ss_dssp CSSSCCEEEEEEEEESSHHHHHHHHHHHHHTCEEESSCCSHHHHHHHHHCHHHHHTCC
T ss_pred CCCCCCceEEEEEEeCCHHHHHHHHHHHhhCEEEeCcccCHHHHHHHhCCHHHhCCCC
Confidence 2 4568999999999999999999999999999993 4444444454444443
No 46
>3n6r_A Propionyl-COA carboxylase, alpha subunit; protein complex, biotin-dependent carboxylase, ligase; HET: BTI; 3.20A {Ruegeria pomeroyi}
Probab=100.00 E-value=3.3e-38 Score=345.03 Aligned_cols=392 Identities=18% Similarity=0.197 Sum_probs=225.4
Q ss_pred cEEEEEeCChhHHHHHHHHHhcCCCcEEEEecCC-CCC--cCCCCCc-ccc----CCCCCCHHHHHHHHHHcCCcEEEEC
Q 010065 83 VVVLVIGGGGREHALCYALKRSHSCDAVFCAPGN-AGI--SNSGDAT-CIP----DLDVLDGDAVISFCRKWSVGLVVVG 154 (519)
Q Consensus 83 ~~vliiG~g~~~~~l~~~l~~~~g~~~v~~~~~~-~~~--~~~~~~~-~v~----~~d~~d~~~l~~~~~~~~id~Vi~g 154 (519)
+||||+|.|.....+++++++. |++++.++++. ... ...++.. .+. .-+..|.+.+++++++.++|+|+|+
T Consensus 3 ~kiLIanrGeia~riiraar~l-Gi~~vav~sd~d~~a~~~~~aD~~~~i~p~~~~~syld~~~i~~~a~~~~~daI~pg 81 (681)
T 3n6r_A 3 NKILIANRGEIACRVIKTARKM-GISTVAIYSDADKQALHVQMADEAVHIGPPPANQSYIVIDKVMAAIRATGAQAVHPG 81 (681)
T ss_dssp CCBCBSCCHHHHHHHHHHHGGG-SCCBCCEECSTTSSCHHHHHSSCCEECSSSSGGGTTSCHHHHHHHHHHTCCSCCBCC
T ss_pred CEEEEECCcHHHHHHHHHHHHc-CCEEEEEEcCCCCCChhHHhCCEEEEcCCCCcccCccCHHHHHHHHHHhCcCEEEEC
Confidence 5899999997667778888776 99998885432 111 1111111 110 1255678999999999999999996
Q ss_pred ----CChhhHHHHHHHHHHCCCCeeCCcHHHHHHhcCHHHHHHHHHHcCCCCCCee--ecCCHHHHHHHHHHhCCCEEEE
Q 010065 155 ----PEAPLVSGLANKLVKAGIPTFGPSSEAAALEGSKNFMKNLCDKYGIPTAKYK--TFTDPNAAKQYIQEEGAPIVVK 228 (519)
Q Consensus 155 ----~E~~~~~~~a~~le~~gip~~g~~~~~~~~~~dK~~~k~~l~~~Gi~~p~~~--~v~~~~~~~~~~~~~g~P~VvK 228 (519)
+|+. .+++.+++.|++++|++++++.++.||..+|++++++|||+|++. .+.+.+++.++++++|||+|+|
T Consensus 82 ~gflsE~~---~~a~~le~~Gi~~iGp~~~ai~~~~dK~~~k~~l~~~GVPvpp~~~~~~~s~~e~~~~a~~igyPvVvK 158 (681)
T 3n6r_A 82 YGFLSENS---KFAEALEAEGVIFVGPPKGAIEAMGDKITSKKIAQEANVSTVPGYMGLIEDADEAVKISNQIGYPVMIK 158 (681)
T ss_dssp SSSSTTCH---HHHHHHHTTTCCCSSSCHHHHHHTTSHHHHHHHHHTTTCCCCCC-------------------------
T ss_pred CCccccCH---HHHHHHHHcCCceECCCHHHHHHhCCHHHHHHHHHHcCcCcCCccccCcCCHHHHHHHHHhcCCcEEEE
Confidence 4665 467779999999999999999999999999999999999999975 6788889988899999999999
Q ss_pred eCCCCCCCcEEEeCCHHHHHHHHHHHHhh--ccCCCCCCcEEEEeccCC-cEEEEEEEEeCC-eeEEeccccccccccCC
Q 010065 229 ADGLAAGKGVIVAMTLEEAYEAVDSMLLK--NAFGSAGCRVIIEEFLEG-EEASFFALVDGE-NAIPLESAQDHKRVGDG 304 (519)
Q Consensus 229 P~~g~gs~GV~~v~~~~el~~a~~~~~~~--~~~~~~~~~~lvEe~I~G-~E~sv~~l~dg~-~~~~~~~~~~~~~~~~~ 304 (519)
|..++||+|++++++.+|+.++++.+... ..| .++.++||+||+| +|+++.++.|+. +++.+...... +...
T Consensus 159 p~~ggggkGv~iv~~~~el~~a~~~~~~ea~~~f--g~~~vlvEe~I~g~rei~V~v~~d~~G~vv~l~~rd~s--~qr~ 234 (681)
T 3n6r_A 159 ASAGGGGKGMRIAWNDQEAREGFQSSKNEAANSF--GDDRIFIEKFVTQPRHIEIQVLCDSHGNGIYLGERECS--IQRR 234 (681)
T ss_dssp ----------------------------------------------CCSCEEEEEEEECCSSSCCEEEEEEECC--CEET
T ss_pred ECCCCCCCCEEEECCHHHHHHHHHHHHHHHHHhC--CCCcEEEEeccCCCcEEEEEEEEeCCCCEEEEeeeecc--eecc
Confidence 99999999999999999999999887542 112 2468999999999 899999998753 45544431100 0000
Q ss_pred CCCCCCCCceEEecCCCCCHHHHHHHHHHHHHHHHHHHHHcCCCeeeEEEEEEEEEcCCCceEEEEEeCCCCCCchHHHH
Q 010065 305 DTGPNTGGMGAYSPAPVLTKELQSVVMESIILPTVKGMSAEGCKFVGVLYAGLMIEKKSGLPKLIEYNVRFGDPECQVLM 384 (519)
Q Consensus 305 ~~~~~~g~~~~~~P~~~l~~~~~~~i~~~a~~~~~~~~~a~g~~~~G~~~vdf~~~~~g~~~~viEiN~R~G~~~~~~~~ 384 (519)
.. ......|++.++++..+++.+.+. ++++++|+. |++++||+++++| ++||+|||||++++.. ...
T Consensus 235 ~~-----k~~e~~Pa~~l~~~~~~~l~~~a~----~~~~alg~~--G~~~vEf~~d~dg-~~~~lEiNpR~~~~~~-~te 301 (681)
T 3n6r_A 235 NQ-----KVVEEAPSPFLDEATRRAMGEQAV----ALAKAVGYA--SAGTVEFIVDGQK-NFYFLEMNTRLQVEHP-VTE 301 (681)
T ss_dssp TE-----ECEEEESCSSCCHHHHHHHHHHHH----HHHHTTTCC--SEEEEEEEECTTS-CCCCCEEECSCCTTHH-HHH
T ss_pred Cc-----cEEEecCCCCCCHHHHHHHHHHHH----HHHHHcCCC--ceEEEEEEEeCCC-CEEEEecccccCCCcH-HhH
Confidence 00 113456887789998888888774 577888866 9999999999876 8999999999987643 444
Q ss_pred HHhCCCHHHHHHHHHhCCCCCCCc--ccCCCcEEEEEEecCCCCCCC-CCCcccccchhhhcc-----------------
Q 010065 385 VRLESDLAEVLLAACRGELTGVTL--NWSPGSAMVVVMASKGYPGSY-EKGSEIQNLEEAEQV----------------- 444 (519)
Q Consensus 385 ~~~G~d~~~~~i~~~~g~~~~~~~--~~~~~~a~~~~l~~~~~~~~~-~~~~~i~~~~~~~~~----------------- 444 (519)
..+|+|++++++++++|...+... ....++++...+.+......+ ...-.+..+......
T Consensus 302 ~~tGvdl~~~~l~~a~G~~l~~~~~~~~~~g~ai~~ri~aedp~~~f~p~~G~i~~~~~p~~~~~~~~~~~~~w~~d~~~ 381 (681)
T 3n6r_A 302 LITGVDLVEQMIRVAAGEPLSITQGDVKLTGWAIENRLYAEDPYRGFLPSIGRLTRYRPPAETAAGPLLVNGKWQGDAPS 381 (681)
T ss_dssp HHHTCCHHHHHHHHHTSCCCSSCTTTCCCCSEEEEEEEESEEGGGTTEECCEECSCEECCCC------------------
T ss_pred HHhCCCHHHHHHHHHCCCCCCCCccccceeEEEEEEEEecCCcccccCCCCcEEEEEECCCCCccccccccccccccccc
Confidence 557999999999999998543321 123467776665543211100 000012111110000
Q ss_pred -CCCeEEEEeeeeecCCCcEEe--cCCeEEEEEEecCCHHHHHHHHHHHhhccccCCe
Q 010065 445 -APSVKIFHAGTALDADGNFIA--TGGRVLGVTAKGKDVEEAQDRAYLAVEEINWPGG 499 (519)
Q Consensus 445 -~~~~~~~~~~~~~~~~g~~~~--~~~rvg~vi~~g~t~~ea~~~a~~~~~~i~~~g~ 499 (519)
.+++++.. +. ..|...+ .+..++.+++.|.|+++|++++.++++.+.+.|.
T Consensus 382 ~~~~vr~d~-~~---~~g~~v~~~yd~~iak~i~~g~~r~~a~~~~~~al~~~~i~g~ 435 (681)
T 3n6r_A 382 GEAAVRNDT-GV---YEGGEISMYYDPMIAKLCTWAPTRAAAIEAMRIALDSFEVEGI 435 (681)
T ss_dssp --CCEEEEE-SC---CTTCEECTTSCCEEEEEEEEESSHHHHHHHHHHHHHHCEECSS
T ss_pred CCCcEEEEc-cc---cCCCccCCCCCCceeEEEEEcCCHHHHHHHHHHHHhcCEEECc
Confidence 01222211 11 2343333 3567899999999999999999999999999993
No 47
>3eth_A Phosphoribosylaminoimidazole carboxylase ATPase subunit; ATP-grAsp, purine biosynthesis, antimicrobial, ATP-binding, decarboxylase, lyase; HET: ATP; 1.60A {Escherichia coli} SCOP: b.84.2.1 c.30.1.1 d.142.1.2 PDB: 1b6r_A* 3etj_A* 1b6s_A*
Probab=100.00 E-value=5e-36 Score=303.89 Aligned_cols=331 Identities=14% Similarity=0.090 Sum_probs=248.0
Q ss_pred cEEEEEeCChhHHHHHHHHHhcCCCcEEEEecCCCCCcCCCCCccccCCCCCCHHHHHHHHHHcCCcEEEECCChhhHHH
Q 010065 83 VVVLVIGGGGREHALCYALKRSHSCDAVFCAPGNAGISNSGDATCIPDLDVLDGDAVISFCRKWSVGLVVVGPEAPLVSG 162 (519)
Q Consensus 83 ~~vliiG~g~~~~~l~~~l~~~~g~~~v~~~~~~~~~~~~~~~~~v~~~d~~d~~~l~~~~~~~~id~Vi~g~E~~~~~~ 162 (519)
++|+|||+|.....++.+.++. |+++ ++++.... . . .++ + ++|+|.+..|.-.. .
T Consensus 2 k~igilGgGqlg~m~~~aa~~l-G~~v--~~~~~~a~-----~-~--~~~------l-------~~d~it~e~e~v~~-~ 56 (355)
T 3eth_A 2 KQVCVLGNGQLGRMLRQAGEPL-GIAV--WPVGLDAE-----P-A--AVP------F-------QQSVITAEIERWPE-T 56 (355)
T ss_dssp CEEEEESCSHHHHHHHHHHGGG-TCEE--EEECTTCC-----G-G--GCC------C-------TTSEEEESCSCCCC-C
T ss_pred CEEEEECCCHHHHHHHHHHHHC-CCEE--ECCCCCCC-----c-e--EEc------c-------cCCEEEECcCCcCH-H
Confidence 5699999997666667666655 9988 45442211 1 1 122 1 89999997664332 2
Q ss_pred HHHHHHHCCCCeeCCcHHHHHHhcCHHHHHHHHHHcCCCCCCeeecCCHHHHHHHHHHhCCCEEEEeCCC-CCCCcEEEe
Q 010065 163 LANKLVKAGIPTFGPSSEAAALEGSKNFMKNLCDKYGIPTAKYKTFTDPNAAKQYIQEEGAPIVVKADGL-AAGKGVIVA 241 (519)
Q Consensus 163 ~a~~le~~gip~~g~~~~~~~~~~dK~~~k~~l~~~Gi~~p~~~~v~~~~~~~~~~~~~g~P~VvKP~~g-~gs~GV~~v 241 (519)
..+.++..| + ++|+++++.+++||..+|++++++|||+|++..+++.+++.++++++|||+||||..+ ++|+|++++
T Consensus 57 ~l~~l~~~~-~-v~p~~~a~~~~~DK~~~k~~l~~~GIptp~~~~v~~~~e~~~~~~~~G~P~VvKp~~~G~~GkGv~~v 134 (355)
T 3eth_A 57 ALTRQLARH-P-AFVNRDVFPIIADRLTQKQLFDKLHLPTAPWQLLAERSEWPAVFDRLGELAIVKRRTGGYDGRGQWRL 134 (355)
T ss_dssp HHHHHHHTC-T-TBTTTTHHHHHHSHHHHHHHHHHTTCCBCCEEEECCGGGHHHHHHHHCSEEEEEESSSCCTTTTEEEE
T ss_pred HHHHHHhcC-C-cCCCHHHHHHhcCHHHHHHHHHHCccCCCCEEEECCHHHHHHHHHHcCCCEEEEecCCCCCCCeEEEE
Confidence 345577777 3 4799999999999999999999999999999999999999999999999999999985 788999999
Q ss_pred CC--HHHHHHHHHHHHhhccCCCCCCcEEEEeccC-CcEEEEEEEEeCC-eeEEeccccccc--cccCCCCCCCCCCceE
Q 010065 242 MT--LEEAYEAVDSMLLKNAFGSAGCRVIIEEFLE-GEEASFFALVDGE-NAIPLESAQDHK--RVGDGDTGPNTGGMGA 315 (519)
Q Consensus 242 ~~--~~el~~a~~~~~~~~~~~~~~~~~lvEe~I~-G~E~sv~~l~dg~-~~~~~~~~~~~~--~~~~~~~~~~~g~~~~ 315 (519)
++ .+|+.+++ + + .+|||+||+ ++|+++.++++.. .+..++...... ..+. ..
T Consensus 135 ~~~~~~el~~a~--------~---~-~vivEe~I~~~~Eisv~v~~~~~G~~~~~p~~e~~~~~g~~~----------~~ 192 (355)
T 3eth_A 135 RANETEQLPAEC--------Y---G-ECIVEQGINFSGEVSLVGARGFDGSTVFYPLTHNLHQDGILR----------TS 192 (355)
T ss_dssp ETTCGGGSCGGG--------T---T-TEEEEECCCCSEEEEEEEEECTTSCEEECCCEEEEEETTEEE----------EE
T ss_pred cCCCHHHHHHHh--------h---C-CEEEEEccCCCcEEEEEEEEcCCCCEEEECCEEEEeeCCeEE----------EE
Confidence 99 99987632 1 2 699999999 5999999998532 344444332211 1111 23
Q ss_pred EecCCCCCHHHHHHHHHHHHHHHHHHHHHcCCCeeeEEEEEEEEEcCCCceEEEEEeCCCCCCchHHHHHHhCCCHHHHH
Q 010065 316 YSPAPVLTKELQSVVMESIILPTVKGMSAEGCKFVGVLYAGLMIEKKSGLPKLIEYNVRFGDPECQVLMVRLESDLAEVL 395 (519)
Q Consensus 316 ~~P~~~l~~~~~~~i~~~a~~~~~~~~~a~g~~~~G~~~vdf~~~~~g~~~~viEiN~R~G~~~~~~~~~~~G~d~~~~~ 395 (519)
+.|+. ++++..+++++.+ .+++.++|+. |++++||++++++ +||+|+||||+++.++++. .+++|.++++
T Consensus 193 ~~pa~-l~~~~~~~~~~~a----~~i~~aLg~~--G~~~vEf~~~~~~--~~v~EinpR~~~sg~~t~~-~~~~s~fe~~ 262 (355)
T 3eth_A 193 VAFPQ-ANAQQQARAEEML----SAIMQELGYV--GVMAMECFVTPQG--LLINELAPRVHNSGHWTQN-GASISQFELH 262 (355)
T ss_dssp EECSS-CCHHHHHHHHHHH----HHHHHHHTCC--EEEEEEEEEETTE--EEEEEEESSCCGGGTTHHH-HSSSCHHHHH
T ss_pred ECCCC-CCHHHHHHHHHHH----HHHHHHCCCe--eEEEEEEEEECCc--EEEEEeeCCCCCCccEEee-eecCCHHHHH
Confidence 56776 8999888888876 4677888876 9999999999754 9999999999998886554 5799999999
Q ss_pred HHHHhCCCC-CCCcccCCCcEEEEEEecCCCCCCCCCCcccccchhhhccCCCeEEEEeeeeecCCCcEEecCCeEEEEE
Q 010065 396 LAACRGELT-GVTLNWSPGSAMVVVMASKGYPGSYEKGSEIQNLEEAEQVAPSVKIFHAGTALDADGNFIATGGRVLGVT 474 (519)
Q Consensus 396 i~~~~g~~~-~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~rvg~vi 474 (519)
+++++|... ++.+ .. ..++.++++.. ..+++.+ .++++++++|.. ...+.++|||+
T Consensus 263 ~ra~~G~pl~~~~~-~~-~~~m~nilg~~-------------~~~~~~~-~p~~~~~~ygk~-------~r~~rkmGhv~ 319 (355)
T 3eth_A 263 LRAITDLPLPQPVV-NN-PSVMINLIGSD-------------VNYDWLK-LPLVHLHWYDKE-------VRPGRKVGHLN 319 (355)
T ss_dssp HHHHTTCCCCCCCC-CS-CEEEEEEESCC-------------CCGGGGG-STTCEEEECCCC-------CCTTCEEEEEE
T ss_pred HHHHcCCCCCCccc-cC-ceEEEEEecch-------------HHHHHHh-CCCCEEEEcCCC-------CCCCCeeEEEE
Confidence 999999843 3222 22 25666666642 1233322 466777777652 13457799999
Q ss_pred EecCCHHHHHHHHHHHhhccc
Q 010065 475 AKGKDVEEAQDRAYLAVEEIN 495 (519)
Q Consensus 475 ~~g~t~~ea~~~a~~~~~~i~ 495 (519)
+.|+|.++++++++++.+.+.
T Consensus 320 ~~~~~~~~~~~~~~~~~~~~~ 340 (355)
T 3eth_A 320 LTDSDTSRLTATLEALIPLLP 340 (355)
T ss_dssp EECSCHHHHHHHHHHHGGGSC
T ss_pred EEcCCHHHHHHHHHHHHHHhh
Confidence 999999999999999988764
No 48
>2qf7_A Pyruvate carboxylase protein; multi-domain, multi-functional, biotin-dependent, ligase; HET: KCX COA AGS; 2.00A {Rhizobium etli} PDB: 3tw6_A* 3tw7_A*
Probab=100.00 E-value=1.3e-36 Score=348.44 Aligned_cols=394 Identities=20% Similarity=0.204 Sum_probs=229.9
Q ss_pred cEEEEEeCChhHHHHHHHHHhcCCCcEEEEecCCCCC---cCCCCCc-cccCC-------C----CCCHHHHHHHHHHcC
Q 010065 83 VVVLVIGGGGREHALCYALKRSHSCDAVFCAPGNAGI---SNSGDAT-CIPDL-------D----VLDGDAVISFCRKWS 147 (519)
Q Consensus 83 ~~vliiG~g~~~~~l~~~l~~~~g~~~v~~~~~~~~~---~~~~~~~-~v~~~-------d----~~d~~~l~~~~~~~~ 147 (519)
+||||-..|.....+++++++. |++++.+++..... ...++.. .+... + ..|.+.|++++++.+
T Consensus 15 ~~~lianrGeia~riiraa~el-Gi~vvav~s~~d~~a~~~~~ADe~~~i~~~~~~~~~~~~~~~yld~~~I~~~a~~~~ 93 (1165)
T 2qf7_A 15 SKILVANRSEIAIRVFRAANEL-GIKTVAIWAEEDKLALHRFKADESYQVGRGPHLARDLGPIESYLSIDEVIRVAKLSG 93 (1165)
T ss_dssp CEEEECCCHHHHHHHHHHHHHT-TCEEEEEECGGGTTCHHHHSSSSEEECSCSTTSSSCCCTTHHHHCHHHHHHHHHHHT
T ss_pred eEEEEcCCcHHHHHHHHHHHHc-CCEEEEEECCCcccchhHHhCCEEEEcCCcccccccCCccccccCHHHHHHHHHHhC
Confidence 4666666664556678888775 99999987542211 1111111 11000 1 125789999999999
Q ss_pred CcEEEECC----ChhhHHHHHHHHHHCCCCeeCCcHHHHHHhcCHHHHHHHHHHcCCCCCCee--ecCCHHHHHHHHHHh
Q 010065 148 VGLVVVGP----EAPLVSGLANKLVKAGIPTFGPSSEAAALEGSKNFMKNLCDKYGIPTAKYK--TFTDPNAAKQYIQEE 221 (519)
Q Consensus 148 id~Vi~g~----E~~~~~~~a~~le~~gip~~g~~~~~~~~~~dK~~~k~~l~~~Gi~~p~~~--~v~~~~~~~~~~~~~ 221 (519)
+|+|+|+. |+. .+++.++.+|+|++|++++++.++.||..+|++++++|||+|++. .+.+.+++.++++++
T Consensus 94 iD~V~pg~g~lsE~~---~~a~~le~~Gi~~iGp~~~ai~~~~DK~~~k~~l~~~GIPvp~~~~~~v~s~eea~~~a~~i 170 (1165)
T 2qf7_A 94 ADAIHPGYGLLSESP---EFVDACNKAGIIFIGPKADTMRQLGNKVAARNLAISVGVPVVPATEPLPDDMAEVAKMAAAI 170 (1165)
T ss_dssp CSEEECCSSTTTTCH---HHHHHHHHTTCEESSCCHHHHHHHHSHHHHHHHHHHTTCCBC--------------------
T ss_pred CCEEEECCCchhcCH---HHHHHHHHcCCceECCCHHHHHHHCCHHHHHHHHHHcCCCCCCeeCcCCCCHHHHHHHHHhc
Confidence 99999963 444 467779999999999999999999999999999999999999998 688888888888999
Q ss_pred CCCEEEEeCCCCCCCcEEEeCCHHHHHHHHHHHHhh--ccCCCCCCcEEEEeccCC-cEEEEEEEEeCC-eeEEecccc-
Q 010065 222 GAPIVVKADGLAAGKGVIVAMTLEEAYEAVDSMLLK--NAFGSAGCRVIIEEFLEG-EEASFFALVDGE-NAIPLESAQ- 296 (519)
Q Consensus 222 g~P~VvKP~~g~gs~GV~~v~~~~el~~a~~~~~~~--~~~~~~~~~~lvEe~I~G-~E~sv~~l~dg~-~~~~~~~~~- 296 (519)
+||+|+||..++||+|++++++.+|+.++++.+... ..| .+..++||+||+| +|+++.++.|+. .++.+....
T Consensus 171 gyPvVVKp~~g~GG~Gv~iv~s~eEL~~a~~~~~~~a~~~f--g~~~vlVEefI~gg~EisV~vl~D~~G~vv~l~~r~~ 248 (1165)
T 2qf7_A 171 GYPVMLKASWGGGGRGMRVIRSEADLAKEVTEAKREAMAAF--GKDEVYLEKLVERARHVESQILGDTHGNVVHLFERDC 248 (1165)
T ss_dssp ---------------------------------------------------CCCSSEEEEEEEEEECTTSCEEEEEEEEE
T ss_pred CCCEEEEeCCCCCCCCEEEECCHHHHHHHHHHHHHHHHhhc--CCCcEEEEEeccCCcEEEEEEEEcCCCcEEEEEeecc
Confidence 999999999999999999999999999999877532 112 1467999999995 999999999764 344332211
Q ss_pred ccccccCCCCCCCCCCceEEecCCCCCHHHHHHHHHHHHHHHHHHHHHcCCCeeeEEEEEEEEE-cCCCceEEEEEeCCC
Q 010065 297 DHKRVGDGDTGPNTGGMGAYSPAPVLTKELQSVVMESIILPTVKGMSAEGCKFVGVLYAGLMIE-KKSGLPKLIEYNVRF 375 (519)
Q Consensus 297 ~~~~~~~~~~~~~~g~~~~~~P~~~l~~~~~~~i~~~a~~~~~~~~~a~g~~~~G~~~vdf~~~-~~g~~~~viEiN~R~ 375 (519)
...+ ..+....+.|++.++++..+++.+.+ .++++++|+. |++++||+++ ++| ++||||||||+
T Consensus 249 s~~r--------~~~~~~e~~Pa~~l~~~~~~~i~~~a----~~i~~alg~~--G~~~vEf~vd~~dg-~~~~iEiNpR~ 313 (1165)
T 2qf7_A 249 SVQR--------RNQKVVERAPAPYLSEAQRQELAAYS----LKIAGATNYI--GAGTVEYLMDADTG-KFYFIEVNPRI 313 (1165)
T ss_dssp EEEE--------TTEEEEEEESCTTCCHHHHHHHHHHH----HHHHHHTTCC--EEEEEEEEEETTTT-EEEEEEEECSC
T ss_pred ccee--------cccceEEecccccCCHHHHHHHHHHH----HHHHHHcCCC--cceeEEEEEECCCC-CEEEEEEEcCC
Confidence 1111 01224567788668998888888866 4677888876 9999999999 666 79999999999
Q ss_pred CCCchHHHHHHhCCCHHHHHHHHHhCCCCC-CC--c-----ccCCCcEEEEEEecCCCCC---CCCCCcccccchhhhcc
Q 010065 376 GDPECQVLMVRLESDLAEVLLAACRGELTG-VT--L-----NWSPGSAMVVVMASKGYPG---SYEKGSEIQNLEEAEQV 444 (519)
Q Consensus 376 G~~~~~~~~~~~G~d~~~~~i~~~~g~~~~-~~--~-----~~~~~~a~~~~l~~~~~~~---~~~~~~~i~~~~~~~~~ 444 (519)
+++.. .....+|+|+.++++++++|.... .. + ....++++.+.+...+ |. .+..+ .|..+... .
T Consensus 314 ~~~~~-vte~~tGiDl~~~~i~~a~G~~l~~~~~g~p~q~~~~~~g~Ai~~ri~ae~-P~~~f~p~~G-~I~~~~~~--~ 388 (1165)
T 2qf7_A 314 QVEHT-VTEVVTGIDIVKAQIHILDGAAIGTPQSGVPNQEDIRLNGHALQCRVTTED-PEHNFIPDYG-RITAYRSA--S 388 (1165)
T ss_dssp CTTHH-HHHHHHCCCHHHHHHHHHTTCCTTSGGGTCCCGGGCCCCSEEEEEEEESEE-TTTTTEECCE-ECCEEECC--C
T ss_pred CCCch-hhhhhhCCCHHHHHHHHHcCCCccccccccccccccccCcEEEEEEEEecC-CccCcCCCCc-EEEEEecC--C
Confidence 88654 344567999999999999997332 21 1 1235677766665543 32 11112 23333221 0
Q ss_pred CCCeEEEEeeeeecCCCcEEe--cCCeEEEEEEecCCHHHHHHHHHHHhhccccCCeeecccccc
Q 010065 445 APSVKIFHAGTALDADGNFIA--TGGRVLGVTAKGKDVEEAQDRAYLAVEEINWPGGFYRRDIGW 507 (519)
Q Consensus 445 ~~~~~~~~~~~~~~~~g~~~~--~~~rvg~vi~~g~t~~ea~~~a~~~~~~i~~~g~~~r~dig~ 507 (519)
.++++++ .+.. ..|...+ .+.++++|++.|+|+++|+++++++++.++++| ||+||+.
T Consensus 389 ~~gvrvd-~g~~--~~G~~v~~~~d~~l~~vi~~g~t~~eA~~~~~~al~~i~i~G--~~tni~~ 448 (1165)
T 2qf7_A 389 GFGIRLD-GGTS--YSGAIITRYYDPLLVKVTAWAPNPLEAISRMDRALREFRIRG--VATNLTF 448 (1165)
T ss_dssp CTTEEEE-CCSC--CTTCEECSSSCCEEEEEEEEESSHHHHHHHHHHHHHHCEEES--SCCSHHH
T ss_pred CCceEee-eccC--CCCCEeCCCCCCceEEEEEEeCCHHHHHHHHHHHhhcEEEec--ccCCHHH
Confidence 1344544 2221 1354444 356788999999999999999999999999999 8888883
No 49
>3hbl_A Pyruvate carboxylase; TIM barrel, ligase; HET: BTI ADP; 2.71A {Staphylococcus aureus subsp} PDB: 3bg5_A* 3ho8_A* 4hnu_A* 4hnt_A* 4hnv_A* 3hb9_A*
Probab=100.00 E-value=7.8e-37 Score=349.47 Aligned_cols=408 Identities=15% Similarity=0.179 Sum_probs=279.1
Q ss_pred ccEEEEEeCChhHHHHHHHHHhcCCCcEEEEecCC--CCCc-CCCCCcc-cc-----CCCCCCHHHHHHHHHHcCCcEEE
Q 010065 82 RVVVLVIGGGGREHALCYALKRSHSCDAVFCAPGN--AGIS-NSGDATC-IP-----DLDVLDGDAVISFCRKWSVGLVV 152 (519)
Q Consensus 82 ~~~vliiG~g~~~~~l~~~l~~~~g~~~v~~~~~~--~~~~-~~~~~~~-v~-----~~d~~d~~~l~~~~~~~~id~Vi 152 (519)
.+||||+|.|.....+++++++. |++++.++... .... ..++... +. .-+..|.+.+++++++.++|+|+
T Consensus 4 ~kkVLIagrGeia~riiraa~el-Gi~vVav~s~~d~~s~~~~~ADe~~~ig~~~~~~~syld~~~Ii~~a~~~~~DaI~ 82 (1150)
T 3hbl_A 4 IKKLLVANRGEIAIRIFRAAAEL-DISTVAIYSNEDKSSLHRYKADESYLVGSDLGPAESYLNIERIIDVAKQANVDAIH 82 (1150)
T ss_dssp CCEEEECCCHHHHHHHHHHHHHT-TCEEEEEECGGGTTCGGGGTSSEEEECCTTSCTTGGGTCHHHHHHHHHHTTCSEEE
T ss_pred CCEEEEECCCHHHHHHHHHHHHC-CCEEEEEEcCCcccchhhhhcceeeecCCCCCccccccCHHHHHHHHHHhCCCEEE
Confidence 57899999997667788888876 99999886432 1111 1111111 10 01335689999999999999999
Q ss_pred EC----CChhhHHHHHHHHHHCCCCeeCCcHHHHHHhcCHHHHHHHHHHcCCCCCCee--ecCCHHHHHHHHHHhCCCEE
Q 010065 153 VG----PEAPLVSGLANKLVKAGIPTFGPSSEAAALEGSKNFMKNLCDKYGIPTAKYK--TFTDPNAAKQYIQEEGAPIV 226 (519)
Q Consensus 153 ~g----~E~~~~~~~a~~le~~gip~~g~~~~~~~~~~dK~~~k~~l~~~Gi~~p~~~--~v~~~~~~~~~~~~~g~P~V 226 (519)
|+ +|+. .+++.++++|++++|++++++.++.||..+|++++++|||+|++. .+.+.+++.++++++|||+|
T Consensus 83 pg~gflsE~~---~~a~~le~~Gi~~iGp~~eai~~~~DK~~~r~ll~~aGIPvpp~~~~~v~s~eea~~~a~~iGyPvV 159 (1150)
T 3hbl_A 83 PGYGFLSENE---QFARRCAEEGIKFIGPHLEHLDMFGDKVKARTTAIKADLPVIPGTDGPIKSYELAKEFAEEAGFPLM 159 (1150)
T ss_dssp CTTTTSTTCH---HHHHHHHHTTCEESSSCHHHHHHHHSHHHHHHHHHHTTCCBCCBCSSCBCSSSTTTTTGGGTCSSEE
T ss_pred ECCCcccccH---HHHHHHHHCCCCeeCCCHHHHHHhCCHHHHHHHHHHcCcCCCCccccCCCCHHHHHHHHHHcCCCEE
Confidence 96 4554 457779999999999999999999999999999999999999998 78888888888889999999
Q ss_pred EEeCCCCCCCcEEEeCCHHHHHHHHHHHHhhc--cCCCCCCcEEEEeccCC-cEEEEEEEEeCC-eeEEecccccccccc
Q 010065 227 VKADGLAAGKGVIVAMTLEEAYEAVDSMLLKN--AFGSAGCRVIIEEFLEG-EEASFFALVDGE-NAIPLESAQDHKRVG 302 (519)
Q Consensus 227 vKP~~g~gs~GV~~v~~~~el~~a~~~~~~~~--~~~~~~~~~lvEe~I~G-~E~sv~~l~dg~-~~~~~~~~~~~~~~~ 302 (519)
+||..|+||+|++++++.+|+.++++.+.... .| .+..++||+||+| +|+++.++.|+. .++.+...... ..
T Consensus 160 VKP~~GgGg~Gv~vv~s~eeL~~a~~~a~~~a~~~f--g~~~vlVEeyI~G~reieV~vl~d~~G~vv~l~er~~s--~q 235 (1150)
T 3hbl_A 160 IKATSGGGGKGMRIVREESELEDAFHRAKSEAEKSF--GNSEVYIERYIDNPKHIEVQVIGDEHGNIVHLFERDCS--VQ 235 (1150)
T ss_dssp EECCC-------CEECCSSSCTHHHHSSSSSCC--------CBEEECCCSSCEEEEEEEEECSSSCEEEEEEEEEE--EE
T ss_pred EEeCCCCCCCCEEEECCHHHHHHHHHHHHHHHHhhc--CCCcEEEEEccCCCcEEEEEEEEeCCCCEEEEEeeccc--ee
Confidence 99999999999999999999999998765321 12 1478999999999 899999998753 44433221100 00
Q ss_pred CCCCCCCCCCceEEecCCCCCHHHHHHHHHHHHHHHHHHHHHcCCCeeeEEEEEEEEEcCCCceEEEEEeCCCCCCchHH
Q 010065 303 DGDTGPNTGGMGAYSPAPVLTKELQSVVMESIILPTVKGMSAEGCKFVGVLYAGLMIEKKSGLPKLIEYNVRFGDPECQV 382 (519)
Q Consensus 303 ~~~~~~~~g~~~~~~P~~~l~~~~~~~i~~~a~~~~~~~~~a~g~~~~G~~~vdf~~~~~g~~~~viEiN~R~G~~~~~~ 382 (519)
... .......|++.++++..+++.+.+ .++++++|+. |++++||++++++ +||||||||+++... .
T Consensus 236 r~~-----~k~~e~~Pa~~l~~~~~~~l~~~a----~~~~~alG~~--G~~~vEflvd~d~--~y~iEINpR~~g~~~-v 301 (1150)
T 3hbl_A 236 RRH-----QKVVEVAPSVGLSPTLRQRICDAA----IQLMENIKYV--NAGTVEFLVSGDE--FFFIEVNPRVQVEHT-I 301 (1150)
T ss_dssp SSS-----CEEEEESSCSSCCHHHHHHHHHHH----HHHHHHTTCC--EEEEEEEEEETTE--EEEEEEECSCCTTHH-H
T ss_pred ccC-----ceeEEecCCCCCCHHHHHHHHHHH----HHHHHHcCCC--ceEEEEEEEECCe--EEEEEEeCCCCCCcc-e
Confidence 000 112346788668999888888876 4677888876 9999999999875 999999999987654 3
Q ss_pred HHHHhCCCHHHHHHHHHhCCCCCC-------C-cccCCCcEEEEEEecCCCCCC--CCCCcccccchhhhccCCCeEEEE
Q 010065 383 LMVRLESDLAEVLLAACRGELTGV-------T-LNWSPGSAMVVVMASKGYPGS--YEKGSEIQNLEEAEQVAPSVKIFH 452 (519)
Q Consensus 383 ~~~~~G~d~~~~~i~~~~g~~~~~-------~-~~~~~~~a~~~~l~~~~~~~~--~~~~~~i~~~~~~~~~~~~~~~~~ 452 (519)
....+|+|+.++++++++|...+. . .....++++...+....-... +..| .+..+... ..+++++-.
T Consensus 302 te~~tGvDlv~~~i~ia~G~~L~~~~~~~~~q~~i~~~G~ai~~Ri~aedp~~~f~P~~G-~i~~~~~p--~~~gvr~d~ 378 (1150)
T 3hbl_A 302 TEMVTGIDIVKTQILVAAGADLFGEEINMPQQKDITTLGYAIQCRITTEDPLNDFMPDTG-TIIAYRSS--GGFGVRLDA 378 (1150)
T ss_dssp HHHHHCCCHHHHHHHHHTTCCTTSTTTCCCCGGGCCCCSEEEEEEECSEEGGGTSEECCC-CCCEEECC--CCTTEEEEE
T ss_pred eehhcCCCHHHHHHHHHCCCCCCccccccccccccccceEEEEEEEeccCCccccCCCCc-eEEEEEcC--CCCceeccc
Confidence 445679999999999999984332 1 112246777665554320000 0011 12221110 012333331
Q ss_pred eeeeecCCCcEEe--cCCeEEEEEEecCCHHHHHHHHHHHhhccccCCe-----eecccccccccccccccc
Q 010065 453 AGTALDADGNFIA--TGGRVLGVTAKGKDVEEAQDRAYLAVEEINWPGG-----FYRRDIGWRALPQKQFAT 517 (519)
Q Consensus 453 ~~~~~~~~g~~~~--~~~rvg~vi~~g~t~~ea~~~a~~~~~~i~~~g~-----~~r~dig~~~~~~~~~~~ 517 (519)
... ..|...+ .+..++.|+++|.|+++|++++.++++.++++|. |.|+-+.++.|...++.|
T Consensus 379 ~~~---~~G~~v~~~yds~lakvi~~g~~~~eA~~~~~~al~~~~i~G~~tn~~~~~~~~~~~~f~~~~~~t 447 (1150)
T 3hbl_A 379 GDG---FQGAEISPYYDSLLVKLSTHAISFKQAEEKMVRSLREMRIRGVKTNIPFLINVMKNKKFTSGDYTT 447 (1150)
T ss_dssp SSC---SSSCCCCTTSCCCSEEEEEEESSHHHHHHHHHHHHHHCEEESSCCSHHHHHHHHHCHHHHHSCCCT
T ss_pred ccc---ccCCEeCCcCCCceeEEEEEeCCHHHHHHHHHHHHhceEEeCccCCHHHHHHHhCCHHHcCCCccc
Confidence 100 1222222 3456899999999999999999999999999992 445545555555544443
No 50
>1a9x_A Carbamoyl phosphate synthetase (large chain); amidotransferase, thioester; HET: CYG ADP; 1.80A {Escherichia coli} SCOP: a.92.1.1 c.24.1.1 c.30.1.1 c.30.1.1 d.142.1.2 d.142.1.2 PDB: 1ce8_A* 1m6v_A* 1c30_A* 1bxr_A* 1c3o_A* 1cs0_A* 1jdb_B* 1kee_A* 1t36_A*
Probab=100.00 E-value=9e-35 Score=333.93 Aligned_cols=369 Identities=19% Similarity=0.178 Sum_probs=265.4
Q ss_pred HHHHHHHhcCCCcEEEEecCCCCCcC-CCCCccccCCCCCCHHHHHHHHHHcCCcEEEECCC--hhhH--HHHHH--HHH
Q 010065 96 ALCYALKRSHSCDAVFCAPGNAGISN-SGDATCIPDLDVLDGDAVISFCRKWSVGLVVVGPE--APLV--SGLAN--KLV 168 (519)
Q Consensus 96 ~l~~~l~~~~g~~~v~~~~~~~~~~~-~~~~~~v~~~d~~d~~~l~~~~~~~~id~Vi~g~E--~~~~--~~~a~--~le 168 (519)
.+++++++. |+++++++++...... ...++.. ++.+.+.+.+.++++++++|+|+|+.+ .++. ..+++ .|+
T Consensus 32 ~~~~al~~~-G~~vv~v~~~~~~~~~~~~~ad~~-~i~p~~~e~i~~i~~~~~~D~V~p~~g~~~~l~~~~~l~~~~~le 109 (1073)
T 1a9x_A 32 QACKALREE-GYRVINVNSNPATIMTDPEMADAT-YIEPIHWEVVRKIIEKERPDAVLPTMGGQTALNCALELERQGVLE 109 (1073)
T ss_dssp HHHHHHHHH-TCEEEEECSCTTCGGGCGGGSSEE-ECSCCCHHHHHHHHHHHCCSEEECSSSHHHHHHHHHHHHHTTHHH
T ss_pred HHHHHHHHc-CCEEEEEeCCcccccCChhhCcEE-EECCCCHHHHHHHHHHhCCCEEEeccCCchHHHHHHHHHHhhHHH
Confidence 478888876 9999998754322111 1112222 345568899999999999999999644 2221 11232 688
Q ss_pred HCCCCeeCCcHHHHHHhcCHHHHHHHHHHcCCCCCCeeecCCHHHHHHHHHHhCCCEEEEeCCCCCCCcEEEeCCHHHHH
Q 010065 169 KAGIPTFGPSSEAAALEGSKNFMKNLCDKYGIPTAKYKTFTDPNAAKQYIQEEGAPIVVKADGLAAGKGVIVAMTLEEAY 248 (519)
Q Consensus 169 ~~gip~~g~~~~~~~~~~dK~~~k~~l~~~Gi~~p~~~~v~~~~~~~~~~~~~g~P~VvKP~~g~gs~GV~~v~~~~el~ 248 (519)
.+|++++|++++++..++||..++++|+++|+|+|++..+++.+++.++++++|||+||||..++||.|+.+++|.+|+.
T Consensus 110 ~~gv~~~G~~~~ai~~~~DK~~~k~~l~~~Gipvp~~~~v~~~~ea~~~~~~ig~PvVvKp~~~~Gg~Gv~iv~~~eel~ 189 (1073)
T 1a9x_A 110 EFGVTMIGATADAIDKAEDRRRFDVAMKKIGLETARSGIAHTMEEALAVAADVGFPCIIRPSFTMGGSGGGIAYNREEFE 189 (1073)
T ss_dssp HHTCEECSSCHHHHHHHHSHHHHHHHHHHTTCCCCSEEEESSHHHHHHHHHHHCSSEEEEETTCCTTTTCEEESSHHHHH
T ss_pred HcCCeeeCCCHHHHHHhhCHHHHHHHHHHCCcCCCCEEEECCHHHHHHHHHHcCCCEEEEECCCCCCCceEEeCCHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhccCCCCCCcEEEEeccCC-cEEEEEEEEeC-CeeEEeccccccccccCCCCCCCCCCceEEecCCCCCHHH
Q 010065 249 EAVDSMLLKNAFGSAGCRVIIEEFLEG-EEASFFALVDG-ENAIPLESAQDHKRVGDGDTGPNTGGMGAYSPAPVLTKEL 326 (519)
Q Consensus 249 ~a~~~~~~~~~~~~~~~~~lvEe~I~G-~E~sv~~l~dg-~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~P~~~l~~~~ 326 (519)
++++.++.. .....++||+||+| +|+++++++|+ ++++.++.... ++ ..+++.|.+..+.|++.++++.
T Consensus 190 ~~~~~~~~~----~~~~~vlvEe~I~G~~E~~v~v~~d~~g~~v~~~~~e~----~d-p~~v~~g~s~~~~Pa~~l~~~~ 260 (1073)
T 1a9x_A 190 EICARGLDL----SPTKELLIDESLIGWKEYEMEVVRDKNDNCIIVCSIEN----FD-AMGIHTGDSITVAPAQTLTDKE 260 (1073)
T ss_dssp HHHHHHHHH----CTTSCEEEEECCTTSEEEEEEEEECTTCCEEEEEEEEE----SS-CTTSCGGGSCEEESCCSCCHHH
T ss_pred HHHHHHHhh----CCCCcEEEEEccCCCeEEEEEEEEeCCCCEEEEEEEec----cc-CCccccCcEEEEecCCCCCHHH
Confidence 999887653 23468999999999 79999999964 34444433322 22 1345666677788997699998
Q ss_pred HHHHHHHHHHHHHHHHHHcCCCeeeEEEEEEEEEcCCCceEEEEEeCCCCCCchHHHHHHhCCCHHHHHHHHHhCCCCCC
Q 010065 327 QSVVMESIILPTVKGMSAEGCKFVGVLYAGLMIEKKSGLPKLIEYNVRFGDPECQVLMVRLESDLAEVLLAACRGELTGV 406 (519)
Q Consensus 327 ~~~i~~~a~~~~~~~~~a~g~~~~G~~~vdf~~~~~g~~~~viEiN~R~G~~~~~~~~~~~G~d~~~~~i~~~~g~~~~~ 406 (519)
.+++++.+. ++++++|+. +|.+++||+++++++++||||||||++++.. .....+|+|+.+..+++++|...+.
T Consensus 261 ~~~l~~~a~----~i~~~lg~~-~G~~~vdf~~~~~~g~~~viEiNpR~~~ss~-l~~~atG~~l~~~~~~~a~G~~l~~ 334 (1073)
T 1a9x_A 261 YQIMRNASM----AVLREIGVE-TGGSNVQFAVNPKNGRLIVIEMNPRVSRSSA-LASKATGFPIAKVAAKLAVGYTLDE 334 (1073)
T ss_dssp HHHHHHHHH----HHHHHHTCC-SEEEEEEEEECTTTCCEEEEEEESSCCHHHH-HHHHHHSCCHHHHHHHHHTTCCGGG
T ss_pred HHHHHHHHH----HHHHHcCcc-cCceEEEEEEECCCCCEEEEEecCCCCccHH-HHHHHhCCCHHHHHHHHHcCCChHH
Confidence 888888774 677888876 3999999999974237999999999987532 2334579999999999999973222
Q ss_pred CcccCCCcEEEEEEecCCC-CCCCCCCcccccchhhhccCCCeEEEEeeeeecCCCcEEecCCeEEEEEEecCCHHHHHH
Q 010065 407 TLNWSPGSAMVVVMASKGY-PGSYEKGSEIQNLEEAEQVAPSVKIFHAGTALDADGNFIATGGRVLGVTAKGKDVEEAQD 485 (519)
Q Consensus 407 ~~~~~~~~a~~~~l~~~~~-~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~rvg~vi~~g~t~~ea~~ 485 (519)
....-.+.+ .+..| |... ..+..++ ... ...-+....++.+..+++|+|++.|+|.+||.+
T Consensus 335 ~~~~i~~~~-----~~a~f~p~~~---~v~~~ip-------~~~---~~~~~~~~~~~~~~~~~~G~v~~~g~~~~ea~~ 396 (1073)
T 1a9x_A 335 LMNDITGGR-----TPASFEPSID---YVVTKIP-------RFN---FEKFAGANDRLTTQMKSVGEVMAIGRTQQESLQ 396 (1073)
T ss_dssp SBCTTTTTC-----SBSCSCCBCS---SEEEEEE-------ECC---GGGCTTSCCBCCSSCCCCEEEEEEESSHHHHHH
T ss_pred hhccccCcc-----CHHHcccCCC---cEEEEcc-------ccc---ccccCCCCcccCCCccCcEEEEEEcCCHHHHHH
Confidence 111100100 00001 1100 0000000 000 000000122344566779999999999999999
Q ss_pred HHHHHhhccccCCee
Q 010065 486 RAYLAVEEINWPGGF 500 (519)
Q Consensus 486 ~a~~~~~~i~~~g~~ 500 (519)
++.++++ +.+.|..
T Consensus 397 ka~~~l~-~~~~g~~ 410 (1073)
T 1a9x_A 397 KALRGLE-VGATGFD 410 (1073)
T ss_dssp HHHHHSS-SSCSSSC
T ss_pred HHHHhhc-ccccCcC
Confidence 9999998 7788864
No 51
>1a9x_A Carbamoyl phosphate synthetase (large chain); amidotransferase, thioester; HET: CYG ADP; 1.80A {Escherichia coli} SCOP: a.92.1.1 c.24.1.1 c.30.1.1 c.30.1.1 d.142.1.2 d.142.1.2 PDB: 1ce8_A* 1m6v_A* 1c30_A* 1bxr_A* 1c3o_A* 1cs0_A* 1jdb_B* 1kee_A* 1t36_A*
Probab=100.00 E-value=2.5e-34 Score=330.27 Aligned_cols=374 Identities=19% Similarity=0.213 Sum_probs=263.6
Q ss_pred CccEEEEEeCChh-----------HHHHHHHHHhcCCCcEEEEecCCCCCcC--CCCCccccCCCCCCHHHHHHHHHHcC
Q 010065 81 QRVVVLVIGGGGR-----------EHALCYALKRSHSCDAVFCAPGNAGISN--SGDATCIPDLDVLDGDAVISFCRKWS 147 (519)
Q Consensus 81 ~~~~vliiG~g~~-----------~~~l~~~l~~~~g~~~v~~~~~~~~~~~--~~~~~~v~~~d~~d~~~l~~~~~~~~ 147 (519)
.+++|+|+|+|.. ...+++++++. |++++.++.+ +.... ....+.+ ++++.+.+.+.++++.++
T Consensus 558 ~~~kVlVlG~G~~riG~~~Efd~~~~~~~~al~~~-G~~vi~v~~n-p~~~s~~~~~ad~~-~~~p~~~e~v~~i~~~e~ 634 (1073)
T 1a9x_A 558 DREKIMVLGGGPNRIGQGIEFDYCCVHASLALRED-GYETIMVNCN-PETVSTDYDTSDRL-YFEPVTLEDVLEIVRIEK 634 (1073)
T ss_dssp SSCEEEEECCCSCBTTBCHHHHHHHHHHHHHHHHT-TCEEEEECCC-TTSSTTSTTSSSEE-ECCCCSHHHHHHHHHHHC
T ss_pred cCcEEEEecCCccccccccccchhHHHHHHHHHhc-CCEEEEEecC-CcccccccccccEE-EeccchhhhhhhhhhhcC
Confidence 4578888888753 12358888876 9999988643 22211 1122333 456778999999999999
Q ss_pred CcEEEECCChhhHHHHHHHHHHCCCCeeCCcHHHHHHhcCHHHHHHHHHHcCCCCCCeeecCCHHHHHHHHHHhCCCEEE
Q 010065 148 VGLVVVGPEAPLVSGLANKLVKAGIPTFGPSSEAAALEGSKNFMKNLCDKYGIPTAKYKTFTDPNAAKQYIQEEGAPIVV 227 (519)
Q Consensus 148 id~Vi~g~E~~~~~~~a~~le~~gip~~g~~~~~~~~~~dK~~~k~~l~~~Gi~~p~~~~v~~~~~~~~~~~~~g~P~Vv 227 (519)
+|+|++..+......+++.|+..|+|++|++++++.+++||..++++|+++|||+|++..+.+.+++.++++++|||+||
T Consensus 635 ~d~Vi~~~g~~~~~~la~~Le~~Gi~i~G~~~~ai~~~~DK~~~~~ll~~~GIp~P~~~~~~s~eea~~~~~~ig~PvvV 714 (1073)
T 1a9x_A 635 PKGVIVQYGGQTPLKLARALEAAGVPVIGTSPDAIDRAEDRERFQHAVERLKLKQPANATVTAIEMAVEKAKEIGYPLVV 714 (1073)
T ss_dssp CSEEECSSSTHHHHTTHHHHHHTTCCBCSSCHHHHHHHHSHHHHHHHHHHHTCCCCCEEECCSHHHHHHHHHHHCSSEEE
T ss_pred cceEEeecCCchHHHHHHHHHHCCCCeeCCCHHHHHHhhCHHHHHHHHHHcCcCCCCceEECCHHHHHHHHHHcCCCEEE
Confidence 99999954432223567889999999999999999999999999999999999999999999999999999999999999
Q ss_pred EeCCCCCCCcEEEeCCHHHHHHHHHHHHhhccCCCCCCcEEEEeccCCc-EEEEEEEEeCCeeEEeccccccccccCCCC
Q 010065 228 KADGLAAGKGVIVAMTLEEAYEAVDSMLLKNAFGSAGCRVIIEEFLEGE-EASFFALVDGENAIPLESAQDHKRVGDGDT 306 (519)
Q Consensus 228 KP~~g~gs~GV~~v~~~~el~~a~~~~~~~~~~~~~~~~~lvEe~I~G~-E~sv~~l~dg~~~~~~~~~~~~~~~~~~~~ 306 (519)
||..++||+|+.++++.+|+.++++.+... ..+..++||+||+|. |++|++++|++.++...... +.. ..
T Consensus 715 KP~~~~gG~Gv~iv~~~~el~~~~~~a~~~----~~~~~vlvEefI~g~~E~~V~~l~d~~~v~~~~i~e-~~~----~~ 785 (1073)
T 1a9x_A 715 RASYVLGGRAMEIVYDEADLRRYFQTAVSV----SNDAPVLLDHFLDDAVEVDVDAICDGEMVLIGGIME-HIE----QA 785 (1073)
T ss_dssp EC-------CEEEECSHHHHHHHHHHCC------------EEEBCCTTCEEEEEEEEECSSCEEEEEEEE-ESS----CT
T ss_pred EECCCCCCCCeEEECCHHHHHHHHHHHHhh----CCCCcEEEEEccCCCcEEEEEEEEECCeEEEEeeEE-EEe----cc
Confidence 999999999999999999999999886531 134689999999996 99999999876544333222 211 34
Q ss_pred CCCCCCceEEecCCCCCHHHHHHHHHHHHHHHHHHHHHcCCCeeeEEEEEEEEEcCCCceEEEEEeCCCCCCchHHHHHH
Q 010065 307 GPNTGGMGAYSPAPVLTKELQSVVMESIILPTVKGMSAEGCKFVGVLYAGLMIEKKSGLPKLIEYNVRFGDPECQVLMVR 386 (519)
Q Consensus 307 ~~~~g~~~~~~P~~~l~~~~~~~i~~~a~~~~~~~~~a~g~~~~G~~~vdf~~~~~g~~~~viEiN~R~G~~~~~~~~~~ 386 (519)
+++.|++....|+..++++..+++++.+ .+++.++|+. |++++||+++++ ++||||+|||++++.. .+...
T Consensus 786 g~~~gd~~~~~P~~~l~~~~~~~i~~~a----~~i~~aLg~~--G~~~vdf~v~~~--~~~viEvNpR~~~~~~-~~~~~ 856 (1073)
T 1a9x_A 786 GVHSGDSACSLPAYTLSQEIQDVMRQQV----QKLAFELQVR--GLMNVQFAVKNN--EVYLIEVNPRAARTVP-FVSKA 856 (1073)
T ss_dssp TSCGGGCCEEESCSSCCHHHHHHHHHHH----HHHHHHTTCC--EEEEEEEEECSS--CEEEEEEECSCCTTHH-HHHHH
T ss_pred CCccCCceEEecCCCCCHHHHHHHHHHH----HHHHHHcCCc--ceEEEEEEEECC--eEEEEEEECCCccHHH-HHHHH
Confidence 6777888888898559999888888876 4677888877 999999999754 4999999999988644 44456
Q ss_pred hCCCHHHHHHHHHhCCCCCCCccc-----CCCcEEEEEEecCCCCCCCCCCcccccchhhhccCCCeEEEEeeeeecCCC
Q 010065 387 LESDLAEVLLAACRGELTGVTLNW-----SPGSAMVVVMASKGYPGSYEKGSEIQNLEEAEQVAPSVKIFHAGTALDADG 461 (519)
Q Consensus 387 ~G~d~~~~~i~~~~g~~~~~~~~~-----~~~~a~~~~l~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~g 461 (519)
+|+|+.++++++++|.... ++.+ ..++++...+.+ .........
T Consensus 857 tGi~l~~~~~~~~~G~~l~-~~~~~~~~~~~~~~vk~~~~~------------------------------f~~~~~~d~ 905 (1073)
T 1a9x_A 857 TGVPLAKVAARVMAGKSLA-EQGVTKEVIPPYYSVKEVVLP------------------------------FNKFPGVDP 905 (1073)
T ss_dssp HSCCHHHHHHHHHTTCCHH-HHTCCSCCCCSSEEEEEEECG------------------------------GGGCTTSCC
T ss_pred HCcCHHHHHHHHHcCCCch-hcccCcCcCCCeEEEEeccCC------------------------------cccCCCCcC
Confidence 7999999999999998321 1111 112222221111 000000000
Q ss_pred cEEecCCeEEEEEEecCCHHHHHHHHHHHhhcccc--CC-eeec-ccccc
Q 010065 462 NFIATGGRVLGVTAKGKDVEEAQDRAYLAVEEINW--PG-GFYR-RDIGW 507 (519)
Q Consensus 462 ~~~~~~~rvg~vi~~g~t~~ea~~~a~~~~~~i~~--~g-~~~r-~dig~ 507 (519)
.+.....+.|.|++.|.|.++|..++..+... .+ .| .++. .|.+-
T Consensus 906 ~lg~~~~stGev~g~~~~~~~a~~ka~~~~~~-~~p~~g~vlisv~d~~K 954 (1073)
T 1a9x_A 906 LLGPEMRSTGEVMGVGRTFAEAFAKAQLGSNS-TMKKHGRALLSVREGDK 954 (1073)
T ss_dssp CCCSSCCCCEEEEEEESSHHHHHHHHHHHTTC-CCCSSSEEEEECCGGGG
T ss_pred CCCCcccccCceEEecCCHHHHHHhhHHhccC-CCCCcceEEEEecCcCH
Confidence 01112355679999999999999999998753 33 45 3333 55543
No 52
>2pn1_A Carbamoylphosphate synthase large subunit; ZP_00538348.1, ATP-grAsp domain, carbamoylphosphate synthase subunit (split gene in MJ); 2.00A {Exiguobacterium sibiricum}
Probab=100.00 E-value=1.4e-33 Score=285.07 Aligned_cols=297 Identities=19% Similarity=0.180 Sum_probs=193.8
Q ss_pred CccEEEEEeCChhHHHHHHHHHhcCC-CcEEEEecCCCCCc-CCCCCc-cccCC-CCCCHHHHHHHHHHcCCcEEEECCC
Q 010065 81 QRVVVLVIGGGGREHALCYALKRSHS-CDAVFCAPGNAGIS-NSGDAT-CIPDL-DVLDGDAVISFCRKWSVGLVVVGPE 156 (519)
Q Consensus 81 ~~~~vliiG~g~~~~~l~~~l~~~~g-~~~v~~~~~~~~~~-~~~~~~-~v~~~-d~~d~~~l~~~~~~~~id~Vi~g~E 156 (519)
.+++|||+|+|.+ ++++++++++.| ++++.++.+..... ...+.. .++.. |....+.++++++++++|+|++..|
T Consensus 3 ~~~~Ili~g~g~~-~~l~~~l~~~~~~~~v~~~d~~~~~~~~~~~d~~~~~~~~~~~~~~~~l~~~~~~~~~d~vi~~~~ 81 (331)
T 2pn1_A 3 QKPHLLITSAGRR-AKLVEYFVKEFKTGRVSTADCSPLASALYMADQHYIVPKIDEVEYIDHLLTLCQDEGVTALLTLID 81 (331)
T ss_dssp TCCEEEEESCTTC-HHHHHHHHHHCCSSEEEEEESCTTCGGGGGSSSEEECCCTTSTTHHHHHHHHHHHHTCCEEEESSH
T ss_pred ccceEEEecCCch-HHHHHHHHHhcCCCEEEEEeCCCcchhHHhhhceecCCCCCChhHHHHHHHHHHHcCCCEEEeCCc
Confidence 3579999999976 578999988766 77777764422111 111111 11112 2223789999999999999999755
Q ss_pred h--hhHHHHHHHHHHCCCCeeCCcHHHHHHhcCHHHHHHHHHHcCCCCCCeeecCCHHHHHHHH--HHhCCCEEEEeCCC
Q 010065 157 A--PLVSGLANKLVKAGIPTFGPSSEAAALEGSKNFMKNLCDKYGIPTAKYKTFTDPNAAKQYI--QEEGAPIVVKADGL 232 (519)
Q Consensus 157 ~--~~~~~~a~~le~~gip~~g~~~~~~~~~~dK~~~k~~l~~~Gi~~p~~~~v~~~~~~~~~~--~~~g~P~VvKP~~g 232 (519)
. ..+..+++.|+..|+|++|++++++.+++||..++++|+++|||+|++.. +.+++.+++ ++++||+|+||..+
T Consensus 82 ~~~~~~a~~~~~l~~~g~~~~~~~~~~~~~~~dK~~~~~~l~~~gip~p~~~~--~~~~~~~~~~~~~~~~P~vvKp~~g 159 (331)
T 2pn1_A 82 PELGLLAQATERFQAIGVTVIVSPYAACELCFDKYTMYEYCLRQGIAHARTYA--TMASFEEALAAGEVQLPVFVKPRNG 159 (331)
T ss_dssp HHHHHHHHTHHHHHTTTCEECCCCHHHHHHHHBHHHHHHHHHHHTCCCCCEES--SHHHHHHHHHTTSSCSCEEEEESBC
T ss_pred hhHHHHHHHHHHHHhCCcEEecCCHHHHHHhhCHHHHHHHHHHcCCCCCcEEe--cHHHhhhhhhcccCCCCEEEEeCCC
Confidence 3 33455677788889999999999999999999999999999999999865 456666665 46899999999999
Q ss_pred CCCCcEEEeCCHHHHHHHHHHHHhhccCCCCCCcEEEEeccCCcEEEEEEEEe---CCeeEEeccccccccccCCCCCCC
Q 010065 233 AAGKGVIVAMTLEEAYEAVDSMLLKNAFGSAGCRVIIEEFLEGEEASFFALVD---GENAIPLESAQDHKRVGDGDTGPN 309 (519)
Q Consensus 233 ~gs~GV~~v~~~~el~~a~~~~~~~~~~~~~~~~~lvEe~I~G~E~sv~~l~d---g~~~~~~~~~~~~~~~~~~~~~~~ 309 (519)
+||.||+++++.+|+.++++. ...++|||||+|+|+++.++.| |+.+......+.+. .
T Consensus 160 ~g~~gv~~v~~~~el~~~~~~----------~~~~lvee~i~G~e~~v~~~~d~~~G~~~~~~~~~~~~~---------~ 220 (331)
T 2pn1_A 160 SASIEVRRVETVEEVEQLFSK----------NTDLIVQELLVGQELGVDAYVDLISGKVTSIFIKEKLTM---------R 220 (331)
T ss_dssp ---------------------------------CEEEEECCCSEEEEEEEEECTTTCCEEEEEEEEEEEE---------E
T ss_pred CCCCCeEEeCCHHHHHHHHHh----------CCCeEEEecCCCcEEEEEEEEecCCCeEEEEEEEEEEEe---------c
Confidence 999999999999999887653 2589999999999999999986 44332222111110 0
Q ss_pred CCCceEEecCCCCCHHHHHHHHHHHHHHHHHHHHHcCCCeeeEEEEEEEEEcCCCceEEEEEeCCCCCCchHHHHHHhCC
Q 010065 310 TGGMGAYSPAPVLTKELQSVVMESIILPTVKGMSAEGCKFVGVLYAGLMIEKKSGLPKLIEYNVRFGDPECQVLMVRLES 389 (519)
Q Consensus 310 ~g~~~~~~P~~~l~~~~~~~i~~~a~~~~~~~~~a~g~~~~G~~~vdf~~~~~g~~~~viEiN~R~G~~~~~~~~~~~G~ 389 (519)
.|......| . ..++ +.+.+ .+++.++|+. |++++||+.+++ ++|++|||||+|++.. +...+|+
T Consensus 221 ~g~~~~~~~-~-~~~~----~~~~~----~~~~~~lg~~--G~~~vd~~~~~g--~~~~iEiN~R~~g~~~--~~~~~G~ 284 (331)
T 2pn1_A 221 AGETDKSRS-V-LRDD----VFELV----EHVLDGSGLV--GPLDFDLFDVAG--TLYLSEINPRFGGGYP--HAYECGV 284 (331)
T ss_dssp TTEEEEEEE-E-CCHH----HHHHH----HHHHTTTCCC--EEEEEEEEEETT--EEEEEEEESSCCTTHH--HHHHTTC
T ss_pred CCceeEeEE-e-ccHH----HHHHH----HHHHHHhCCc--ceEEEEEEEcCC--CEEEEEEeCCCCCchH--HHHHcCC
Confidence 111111122 2 3443 33333 3455778875 999999996544 5999999999987654 3455799
Q ss_pred CHHHHHHHHHhCCCCCC-CcccCCCcE
Q 010065 390 DLAEVLLAACRGELTGV-TLNWSPGSA 415 (519)
Q Consensus 390 d~~~~~i~~~~g~~~~~-~~~~~~~~a 415 (519)
|+.++++++++|....+ ...+.++..
T Consensus 285 ~~~~~~~~~~~g~~~~~~~~~~~~~~~ 311 (331)
T 2pn1_A 285 NFPAQLYRNLMHEINVPQIGQYLDDIY 311 (331)
T ss_dssp CHHHHHHHHHTTCCCCCCTTCSCSSCE
T ss_pred CHHHHHHHHHcCCCCCccccccccCcE
Confidence 99999999999986544 234555443
No 53
>3vmm_A Alanine-anticapsin ligase BACD; ATP-grAsp domain, amino acid ligase, ATP binding; HET: ADP P0D; 2.50A {Bacillus subtilis}
Probab=100.00 E-value=5.4e-32 Score=285.21 Aligned_cols=250 Identities=20% Similarity=0.260 Sum_probs=203.0
Q ss_pred HHHHHHHHHHcCCcEEEECCChhhHHHHHHHHHHCCCCeeCCcHHHHHHhcCHHHHHHHHHHcCCCCCCeeecCCHHHHH
Q 010065 136 GDAVISFCRKWSVGLVVVGPEAPLVSGLANKLVKAGIPTFGPSSEAAALEGSKNFMKNLCDKYGIPTAKYKTFTDPNAAK 215 (519)
Q Consensus 136 ~~~l~~~~~~~~id~Vi~g~E~~~~~~~a~~le~~gip~~g~~~~~~~~~~dK~~~k~~l~~~Gi~~p~~~~v~~~~~~~ 215 (519)
.+.+++++++.++|+|+|++|..+. .+++.++.+|+| |++++++.+++||..++++|+++|||+|++..+++.+++.
T Consensus 91 i~~I~~~a~~~~id~Vip~sE~~l~-~~a~~~e~~Gi~--g~~~~ai~~~~DK~~~k~~l~~~GIpvp~~~~v~s~ee~~ 167 (474)
T 3vmm_A 91 VEQIVKVAEMFGADAITTNNELFIA-PMAKACERLGLR--GAGVQAAENARDKNKMRDAFNKAGVKSIKNKRVTTLEDFR 167 (474)
T ss_dssp HHHHHHHHHHTTCSEEEESCGGGHH-HHHHHHHHTTCC--CSCHHHHHHTTCHHHHHHHHHHTTSCCCCEEEECSHHHHH
T ss_pred HHHHHHHHHHcCCCEEEECCcccHH-HHHHHHHHcCCC--CCCHHHHHHhhCHHHHHHHHHHcCCCCCCeEEECCHHHHH
Confidence 5788999999999999998888543 467889999999 9999999999999999999999999999999999999999
Q ss_pred HHHHHhCCCEEEEeCCCCCCCcEEEeCCHHHHHHHHHHHHhhcc---C---CCCCCcEEEEeccCCcE------------
Q 010065 216 QYIQEEGAPIVVKADGLAAGKGVIVAMTLEEAYEAVDSMLLKNA---F---GSAGCRVIIEEFLEGEE------------ 277 (519)
Q Consensus 216 ~~~~~~g~P~VvKP~~g~gs~GV~~v~~~~el~~a~~~~~~~~~---~---~~~~~~~lvEe~I~G~E------------ 277 (519)
++++++|||+|+||..++||+|+.++++.+|+.++++.+..... . -..++.+||||||+|.|
T Consensus 168 ~~~~~lg~PvVVKP~~g~gg~Gv~iv~~~eel~~a~~~~~~~~~~~~~~~a~~~~~~vlVEe~I~G~e~~~~q~~~~~~e 247 (474)
T 3vmm_A 168 AALEEIGTPLILKPTYLASSIGVTLITDTETAEDEFNRVNDYLKSINVPKAVTFEAPFIAEEFLQGEYGDWYQTEGYSDY 247 (474)
T ss_dssp HHHHHSCSSEEEEESSCCTTTTCEEECCTTSHHHHHHHHHHHHTTSCCCTTCCCSCSEEEEECCCBCHHHHCSSSSSCSE
T ss_pred HHHHHcCCCEEEEECCCCcCceEEEECCHHHHHHHHHHHHHHHhhccccccccCCCeEEEEeCCCCceeeeeecccccce
Confidence 99999999999999999999999999999999999988764210 0 01357899999999976
Q ss_pred EEEEEEEeCCeeEEeccccccccccCCCCCCCCCCceEEecCCCCCHHHHHHHHHHHHHHHHHHHHHcCCCeeeEE-EEE
Q 010065 278 ASFFALVDGENAIPLESAQDHKRVGDGDTGPNTGGMGAYSPAPVLTKELQSVVMESIILPTVKGMSAEGCKFVGVL-YAG 356 (519)
Q Consensus 278 ~sv~~l~dg~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~P~~~l~~~~~~~i~~~a~~~~~~~~~a~g~~~~G~~-~vd 356 (519)
+++.++..++....+........ ..++......|+. ++++..+++.+.+ .++++++|+. |.. |+|
T Consensus 248 ~sv~~v~~dg~~~~v~i~~~~~~-------~~~~~~~~~~Pa~-l~~~~~~~l~~~a----~~~~~alG~~--g~~~~ve 313 (474)
T 3vmm_A 248 ISIEGIMADGEYFPIAIHDKTPQ-------IGFTETSHITPSI-LDEEAKKKIVEAA----KKANEGLGLQ--NCATHTE 313 (474)
T ss_dssp EEEEEEEETTEEEEEEEEEECCC-------BTTBCCEEEESCC-CCHHHHHHHHHHH----HHHHHHHTCC--SEEEEEE
T ss_pred eEEEEEEECCeEEEEEEEeeccC-------CCccceEEEECCC-CCHHHHHHHHHHH----HHHHHHcCCC--CccEEEE
Confidence 89987763333332322211100 1134457788997 9999888888876 4678899987 666 899
Q ss_pred EEEEcCCCceEEEEEeCCCCCCchHH-HHHHhCCCHHHHHHHHHh-CCC
Q 010065 357 LMIEKKSGLPKLIEYNVRFGDPECQV-LMVRLESDLAEVLLAACR-GEL 403 (519)
Q Consensus 357 f~~~~~g~~~~viEiN~R~G~~~~~~-~~~~~G~d~~~~~i~~~~-g~~ 403 (519)
|+++++| ++|+||+|||++++..+. +...+|+|+.++++++++ |..
T Consensus 314 f~~~~dg-~~~~iEvNpR~~G~~~~~~~~~~tG~dl~~~~i~~a~~G~~ 361 (474)
T 3vmm_A 314 IKLMKNR-EPGLIESAARFAGWNMIPNIKKVFGLDMAQLLLDVLCFGKD 361 (474)
T ss_dssp EEEEGGG-EEEEEEEESSCCSTTHHHHHHHHHCCCHHHHHHHHHHHGGG
T ss_pred EEEcCCC-CEEEEEEeCCCCCCchHHHHHHHHCcCHHHHHHHHHcCCCC
Confidence 9999876 899999999997654433 344569999999999999 974
No 54
>1uc8_A LYSX, lysine biosynthesis enzyme; alpha-aminoadipate pathway, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.00A {Thermus thermophilus} SCOP: c.30.1.6 d.142.1.7 PDB: 1uc9_A*
Probab=99.96 E-value=1.6e-28 Score=241.50 Aligned_cols=271 Identities=18% Similarity=0.096 Sum_probs=183.9
Q ss_pred EEEEeCCh--hHHHHHHHHHhcCCCcEEEEecCCCCCcCCCCCccccCCCCCCHHHHHHHHHHcCCc-EEEECCChhhHH
Q 010065 85 VLVIGGGG--REHALCYALKRSHSCDAVFCAPGNAGISNSGDATCIPDLDVLDGDAVISFCRKWSVG-LVVVGPEAPLVS 161 (519)
Q Consensus 85 vliiG~g~--~~~~l~~~l~~~~g~~~v~~~~~~~~~~~~~~~~~v~~~d~~d~~~l~~~~~~~~id-~Vi~g~E~~~~~ 161 (519)
|+|++... ....++.++++. |++++.+++.+.... + .+.. ....++| ++++........
T Consensus 2 I~il~~~~~~~~~~~~~a~~~~-G~~v~~~~~~~~~~~-------~--~~~~--------~~~~~~d~~~~~~~~~~~~~ 63 (280)
T 1uc8_A 2 LAILYDRIRPDERMLFERAEAL-GLPYKKVYVPALPMV-------L--GERP--------KELEGVTVALERCVSQSRGL 63 (280)
T ss_dssp EEEEESSCCHHHHHHHHHHHHH-TCCEEEEEGGGCCEE-------T--TBCC--------GGGTTCCEEEECCSSHHHHH
T ss_pred EEEEecCCCHHHHHHHHHHHHc-CCcEEEEehhhceee-------c--cCCC--------cccCCCCEEEECCccchhhH
Confidence 67787642 335678888777 999998876532211 0 0100 1124689 555542222223
Q ss_pred HHHHHHHHCCCCeeCCcHHHHHHhcCHHHHHHHHHHcCCCCCCeeecCCHHHHHHHHHHhCCCEEEEeCCCCCCCcEEEe
Q 010065 162 GLANKLVKAGIPTFGPSSEAAALEGSKNFMKNLCDKYGIPTAKYKTFTDPNAAKQYIQEEGAPIVVKADGLAAGKGVIVA 241 (519)
Q Consensus 162 ~~a~~le~~gip~~g~~~~~~~~~~dK~~~k~~l~~~Gi~~p~~~~v~~~~~~~~~~~~~g~P~VvKP~~g~gs~GV~~v 241 (519)
.+++.++.+|+|++ ++++++.+++||..++++|+++|||+|++..+.+.+++.+++++++||+|+||..+++|.||.++
T Consensus 64 ~~~~~l~~~g~~~~-~~~~~~~~~~dK~~~~~~l~~~gi~~p~~~~~~~~~~~~~~~~~~~~p~vvKp~~g~~~~gv~~v 142 (280)
T 1uc8_A 64 AAARYLTALGIPVV-NRPEVIEACGDKWATSVALAKAGLPQPKTALATDREEALRLMEAFGYPVVLKPVIGSWGRLLAXX 142 (280)
T ss_dssp HHHHHHHHTTCCEE-SCHHHHHHHHBHHHHHHHHHHTTCCCCCEEEESSHHHHHHHHHHHCSSEEEECSBCCBCSHHHHH
T ss_pred HHHHHHHHCCCcee-CCHHHHHHhCCHHHHHHHHHHcCcCCCCeEeeCCHHHHHHHHHHhCCCEEEEECCCCCcccceec
Confidence 56677899999998 56999999999999999999999999999999999999888899999999999999999999999
Q ss_pred CCHHHHHHHHHHH--HhhccCCCCCCcEEEEeccCC--cEEEEEEEEeCCeeEEeccccccccccCCCCCCCCCCceEEe
Q 010065 242 MTLEEAYEAVDSM--LLKNAFGSAGCRVIIEEFLEG--EEASFFALVDGENAIPLESAQDHKRVGDGDTGPNTGGMGAYS 317 (519)
Q Consensus 242 ~~~~el~~a~~~~--~~~~~~~~~~~~~lvEe~I~G--~E~sv~~l~dg~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 317 (519)
++.+|+.++++.+ +.. ..+..++||+||+| .|+++.++ +|+ .+... .+.. .++...++.++ ...
T Consensus 143 ~~~~el~~~~~~~~~~~~----~~~~~~lvqe~i~~~~~e~~v~v~-~~~-~~~~~-~~~~---~~~~~~~~~g~--~~~ 210 (280)
T 1uc8_A 143 XXXXXXXXXXXXKEVLGG----FQHQLFYIQEYVEKPGRDIRVFVV-GER-AIAAI-YRRS---AHWITNTARGG--QAE 210 (280)
T ss_dssp HHHHC------------C----TTTTCEEEEECCCCSSCCEEEEEE-TTE-EEEEE-EC-------------------CE
T ss_pred ccccccchhhhhHhhhcc----cCCCcEEEEeccCCCCceEEEEEE-CCE-EEEEE-EEec---CCccccccCCc--ccc
Confidence 9999999888765 210 12578999999996 56666554 444 33221 1111 11222233333 235
Q ss_pred cCCCCCHHHHHHHHHHHHHHHHHHHHHcCCCeeeEEEEEEEEEcCCCceEEEEEeCCCCCCchHHHHHHhCCCHHHHHHH
Q 010065 318 PAPVLTKELQSVVMESIILPTVKGMSAEGCKFVGVLYAGLMIEKKSGLPKLIEYNVRFGDPECQVLMVRLESDLAEVLLA 397 (519)
Q Consensus 318 P~~~l~~~~~~~i~~~a~~~~~~~~~a~g~~~~G~~~vdf~~~~~g~~~~viEiN~R~G~~~~~~~~~~~G~d~~~~~i~ 397 (519)
|.. ++++ +.+.+ .++++++|+ |++++||+++++| +|++|+|+|||++. +...+|+|+.+++++
T Consensus 211 p~~-l~~~----~~~~~----~~~~~~lg~---g~~~vD~~~~~~g--~~~iEiN~r~g~~~---~~~~~G~~~~~~~~~ 273 (280)
T 1uc8_A 211 NCP-LTEE----VARLS----VKAAEAVGG---GVVAVDLFESERG--LLVNEVNHTMEFKN---SVHTTGVDIPGEILK 273 (280)
T ss_dssp ECC-CCHH----HHHHH----HHHHHHTTC---SEEEEEEEEETTE--EEEEEEETTCCCTT---HHHHHCCCHHHHHHH
T ss_pred CCC-CCHH----HHHHH----HHHHHHhCC---CeEEEEEEEeCCC--eEEEEEeCCCCccc---hheeeccCHHHHHHH
Confidence 776 6764 33333 345577875 8899999999886 99999999998864 344579999999999
Q ss_pred HHhCCC
Q 010065 398 ACRGEL 403 (519)
Q Consensus 398 ~~~g~~ 403 (519)
++.|..
T Consensus 274 ~~~~~~ 279 (280)
T 1uc8_A 274 YAWSLA 279 (280)
T ss_dssp HHHHTC
T ss_pred HHHhhc
Confidence 998763
No 55
>2r85_A PURP protein PF1517; ATP-grAsp superfamily, unknown function; HET: AMP; 1.70A {Pyrococcus furiosus} SCOP: c.30.1.8 d.142.1.9 PDB: 2r84_A* 2r86_A* 2r87_A*
Probab=99.96 E-value=5.7e-28 Score=243.96 Aligned_cols=266 Identities=15% Similarity=0.128 Sum_probs=175.1
Q ss_pred ccEEEEEeCChhHHHHHHHHHhcCCCcEEEEecCCCCC----cCCCCCccccCCC-CCCHHHHHHHHHHcCCcEEEECCC
Q 010065 82 RVVVLVIGGGGREHALCYALKRSHSCDAVFCAPGNAGI----SNSGDATCIPDLD-VLDGDAVISFCRKWSVGLVVVGPE 156 (519)
Q Consensus 82 ~~~vliiG~g~~~~~l~~~l~~~~g~~~v~~~~~~~~~----~~~~~~~~v~~~d-~~d~~~l~~~~~~~~id~Vi~g~E 156 (519)
+++|+|+|+| ....+++++++. |++++++++++... ....+ ..+ ..+ ..+ +.+ ++ .+|+|++..|
T Consensus 2 ~m~Ililg~g-~~~~l~~a~~~~-G~~v~~~~~~~~~~~~~~~~~~~-~~~-~~~~~~d-~~l---~~--~~d~i~~~~e 71 (334)
T 2r85_A 2 KVRIATYASH-SALQILKGAKDE-GFETIAFGSSKVKPLYTKYFPVA-DYF-IEEKYPE-EEL---LN--LNAVVVPTGS 71 (334)
T ss_dssp CSEEEEESST-THHHHHHHHHHT-TCCEEEESCGGGHHHHHTTSCCC-SEE-ECSSCCH-HHH---HH--TTEEECCCTT
T ss_pred ceEEEEECCh-hHHHHHHHHHhC-CCEEEEEECCCCCcccccccccC-ceE-ecCCcCh-HHh---cc--cCCEEEECcc
Confidence 4678888887 445678888776 99999887653211 11111 111 223 222 222 22 3588888777
Q ss_pred hhhHHHHHHHHHHCCCCeeCCcHHHHHHhcCHHHHHHHHHHcCCCCCCeeecCCHHHHHHHHHHhCCCEEEEeCCCCCCC
Q 010065 157 APLVSGLANKLVKAGIPTFGPSSEAAALEGSKNFMKNLCDKYGIPTAKYKTFTDPNAAKQYIQEEGAPIVVKADGLAAGK 236 (519)
Q Consensus 157 ~~~~~~~a~~le~~gip~~g~~~~~~~~~~dK~~~k~~l~~~Gi~~p~~~~v~~~~~~~~~~~~~g~P~VvKP~~g~gs~ 236 (519)
..... ..+.++.+|+|++ ++++++.+++||..++++|+++|||+|++ +.+.++ ++||+|+||..++||+
T Consensus 72 ~~~~~-~~~~le~~g~~~~-~~~~~~~~~~dK~~~~~~l~~~gip~p~~--~~~~~~-------l~~P~vvKP~~g~~s~ 140 (334)
T 2r85_A 72 FVAHL-GIELVENMKVPYF-GNKRVLRWESDRNLERKWLKKAGIRVPEV--YEDPDD-------IEKPVIVKPHGAKGGK 140 (334)
T ss_dssp HHHHH-CHHHHHTCCSCBB-SCTTHHHHHHSHHHHHHHHHHTTCCCCCB--CSCGGG-------CCSCEEEEECC----T
T ss_pred hhhhh-HHHHHHHcCCCcc-CCHHHHHHHHhHHHHHHHHHHcCCCCCCc--cCChHH-------cCCCEEEEeCCCCCCC
Confidence 54332 2345688999987 56799999999999999999999999998 566543 5799999999999999
Q ss_pred cEEEeCCHHHHHHHHHHHHhhccCCCCCCcEEEEeccCCcEEEEEEEEe------------CCeeEEecccc--cccccc
Q 010065 237 GVIVAMTLEEAYEAVDSMLLKNAFGSAGCRVIIEEFLEGEEASFFALVD------------GENAIPLESAQ--DHKRVG 302 (519)
Q Consensus 237 GV~~v~~~~el~~a~~~~~~~~~~~~~~~~~lvEe~I~G~E~sv~~l~d------------g~~~~~~~~~~--~~~~~~ 302 (519)
||.++++.+|+.++++.++....+ +....+||||||+|.|+++.++.+ |+......... .....+
T Consensus 141 Gv~~v~~~~el~~~~~~~~~~~~~-~~~~~~lvee~i~G~e~~~~~~~~~~~~~v~~~~~~g~~~~~~~~~~~~~~~~~~ 219 (334)
T 2r85_A 141 GYFLAKDPEDFWRKAEKFLGIKRK-EDLKNIQIQEYVLGVPVYPHYFYSKVREELELMSIDRRYESNVDAIGRIPAKDQL 219 (334)
T ss_dssp TCEEESSHHHHHHHHHHHHCCCSG-GGCCSEEEEECCCCEEEEEEEEEETTTTEEEEEEEEEEEEEEGGGGGGSCHHHHT
T ss_pred CEEEECCHHHHHHHHHHHHhhccc-CCCCcEEEEeccCCceeEEEEeecCcCceeeeeeeccEEEeccCccccccccccc
Confidence 999999999999999887632111 012689999999999998554432 22111100000 000111
Q ss_pred CCCCCCCCCCceEEecCCCCCHHHHHHHHHHHHHHHHHHHHHc-----CCCeeeEEEEEEEEEcCCCceEEEEEeCCCCC
Q 010065 303 DGDTGPNTGGMGAYSPAPVLTKELQSVVMESIILPTVKGMSAE-----GCKFVGVLYAGLMIEKKSGLPKLIEYNVRFGD 377 (519)
Q Consensus 303 ~~~~~~~~g~~~~~~P~~~l~~~~~~~i~~~a~~~~~~~~~a~-----g~~~~G~~~vdf~~~~~g~~~~viEiN~R~G~ 377 (519)
+.+.++.....+++ |+. ++++..+++.+.+. ++++++ ++. |++|+||+++++| ++|++|||||||+
T Consensus 220 ~~~~~~~~~~~g~~-p~~-l~~~~~~~i~~~a~----~~~~~l~~~~~~~~--G~~~vd~~~~~~g-~~~viEiN~R~g~ 290 (334)
T 2r85_A 220 EFDMDITYTVIGNI-PIV-LRESLLMDVIEAGE----RVVKAAEELMGGLW--GPFCLEGVFTPDL-EFVVFEISARIVA 290 (334)
T ss_dssp TSCCCCCEEEEEEE-ECC-CCGGGHHHHHHHHH----HHHHHHHHHSSCCC--EEEEEEEEECTTS-CEEEEEEECSCCG
T ss_pred ccccCCceeeeCCC-Ccc-cCHHHHHHHHHHHH----HHHHHHHhhccccc--ccEEEEEEECCCC-CEEEEEEeCCcCC
Confidence 11111222223333 887 88877778777664 566777 544 9999999999876 7999999999988
Q ss_pred C
Q 010065 378 P 378 (519)
Q Consensus 378 ~ 378 (519)
+
T Consensus 291 ~ 291 (334)
T 2r85_A 291 G 291 (334)
T ss_dssp G
T ss_pred C
Confidence 4
No 56
>2r7k_A 5-formaminoimidazole-4-carboxamide-1-(beta)-D- ribofuranosyl 5'-monophosphate synthetase...; ATP-grAsp superfamily, ATP-binding; HET: ACP AMZ; 2.10A {Methanocaldococcus jannaschii} SCOP: c.30.1.8 d.142.1.9 PDB: 2r7l_A* 2r7m_A* 2r7n_A*
Probab=99.95 E-value=3e-27 Score=239.38 Aligned_cols=276 Identities=17% Similarity=0.221 Sum_probs=181.2
Q ss_pred CccEEEEEeCChhHHHHHHHHHhcCCCcEEEEecCCCCC--cCCCCCccccCCC-CCCH--HHHHHHHHHcCCcEEEECC
Q 010065 81 QRVVVLVIGGGGREHALCYALKRSHSCDAVFCAPGNAGI--SNSGDATCIPDLD-VLDG--DAVISFCRKWSVGLVVVGP 155 (519)
Q Consensus 81 ~~~~vliiG~g~~~~~l~~~l~~~~g~~~v~~~~~~~~~--~~~~~~~~v~~~d-~~d~--~~l~~~~~~~~id~Vi~g~ 155 (519)
++++|+++|+| ....+++++++. |+++++++++.... .....++.+...| .+|. +++++.+.+.+ |+|. .
T Consensus 17 ~~~~I~ilGs~-l~~~l~~aAk~l-G~~vi~vd~~~~~p~~~~~~~ad~~~~~d~~~d~~~~~~l~~l~~~~-~vV~--p 91 (361)
T 2r7k_A 17 DEITIATLGSH-TSLHILKGAKLE-GFSTVCITMKGRDVPYKRFKVADKFIYVDNFSDIKNEEIQEKLRELN-SIVV--P 91 (361)
T ss_dssp TSCEEEEESST-THHHHHHHHHHT-TCCEEEEECTTSCHHHHHTTCCSEEEECSSGGGGGSHHHHHHHHHTT-EEEC--C
T ss_pred cCCEEEEECcH-HHHHHHHHHHHC-CCEEEEEECCCCCCcccccccCceEEECCCcccccHHHHHHHHHHcC-CEEE--e
Confidence 35789999998 566778888776 99999998763221 0111112221345 3341 45555555554 4444 4
Q ss_pred ChhhHH--HHHHHHHHCCCCeeCCcHHHHHHhcCHHHHHHHHHHcCCCCCCeeecCCHHHHHHHHHHhCCCEEEEeCCCC
Q 010065 156 EAPLVS--GLANKLVKAGIPTFGPSSEAAALEGSKNFMKNLCDKYGIPTAKYKTFTDPNAAKQYIQEEGAPIVVKADGLA 233 (519)
Q Consensus 156 E~~~~~--~~a~~le~~gip~~g~~~~~~~~~~dK~~~k~~l~~~Gi~~p~~~~v~~~~~~~~~~~~~g~P~VvKP~~g~ 233 (519)
|...+. ++.+..+..|+|++| +..++.+..||..+|++|+++|||+|++ +.+.+++ ++|+||||..++
T Consensus 92 e~~~v~~~gl~~l~~~~g~~v~g-~~~a~~~e~~k~~~k~~l~~~GIptp~~--~~~~~e~-------~~PvVVK~~~~a 161 (361)
T 2r7k_A 92 HGSFIAYCGLDNVENSFLVPMFG-NRRILRWESERSLEGKLLREAGLRVPKK--YESPEDI-------DGTVIVKFPGAR 161 (361)
T ss_dssp BHHHHHHHCHHHHHHTCCSCBBS-CGGGGGTTTCHHHHHHHHHHTTCCCCCE--ESSGGGC-------CSCEEEECSCCC
T ss_pred CchhhhHHHHHHHHHHcCCCcCC-CHHHHHHhhhHHHHHHHHHHcCcCCCCE--eCCHHHc-------CCCEEEeeCCCC
Confidence 444433 444444589999986 8888899999999999999999999986 5565543 699999999999
Q ss_pred CCCcEEEeCCHHHHHHHHHHHHhhccCCCC-CCcEEEEeccCCcEEEEEEEEe--CCeeEEecccccc------------
Q 010065 234 AGKGVIVAMTLEEAYEAVDSMLLKNAFGSA-GCRVIIEEFLEGEEASFFALVD--GENAIPLESAQDH------------ 298 (519)
Q Consensus 234 gs~GV~~v~~~~el~~a~~~~~~~~~~~~~-~~~~lvEe~I~G~E~sv~~l~d--g~~~~~~~~~~~~------------ 298 (519)
+|+||++++|.+|+.++++.++....++.. ...++|||||+|.|+++..+.. ++.+..+....+.
T Consensus 162 ~GkGv~v~~s~ee~~~a~~~~~~~~~~~~~~~~~viIEEfl~G~e~s~~~f~~~~~~~~e~~~id~r~~~~~dgi~~~~~ 241 (361)
T 2r7k_A 162 GGRGYFIASSTEEFYKKAEDLKKRGILTDEDIANAHIEEYVVGTNFCIHYFYSPLKDEVELLGMDKRYESNIDGLVRIPA 241 (361)
T ss_dssp C---EEEESSHHHHHHHHHHHHHTTSCCHHHHHHCEEEECCCSEEEEEEEEEETTTTEEEEEEEEEEEEEEHHHHTTSCH
T ss_pred CCCCEEEECCHHHHHHHHHHHHhccccccCCCCeEEEEeccceEEeeEEEEecccCCeeEEEEecceEEeecccceecch
Confidence 999999999999999999887643222111 1479999999999998555432 2211111111110
Q ss_pred ccccCCCCCCCCCCceEEecCCCCCHHHHHHHHHHHHHHHHHHHHHcC----CCeeeEEEEEEEEEcCCCceEEEEEeCC
Q 010065 299 KRVGDGDTGPNTGGMGAYSPAPVLTKELQSVVMESIILPTVKGMSAEG----CKFVGVLYAGLMIEKKSGLPKLIEYNVR 374 (519)
Q Consensus 299 ~~~~~~~~~~~~g~~~~~~P~~~l~~~~~~~i~~~a~~~~~~~~~a~g----~~~~G~~~vdf~~~~~g~~~~viEiN~R 374 (519)
+..+.....+.....++. |+. ++++..+++.+.+. +++.+++ ..++|++++||+++++| +++++|||||
T Consensus 242 ~~~~~~~~~p~~v~~G~~-Pa~-l~~~~~~~a~~~a~----~v~~al~~~~~~~~~G~~~vE~fvt~dg-~i~V~EIapR 314 (361)
T 2r7k_A 242 KDQLEMNINPSYVITGNI-PVV-IRESLLPQVFEMGD----KLVAKAKELVPPGMIGPFCLQSLCNENL-ELVVFEMSAR 314 (361)
T ss_dssp HHHHTCCCCCCEEEEEEE-ECC-CCGGGHHHHHHHHH----HHHHHHHHHSTTCCCEEEEEEEEECTTS-CEEEEEEESS
T ss_pred hhhhcccCCCceEEecCc-CCc-CCHHHHHHHHHHHH----HHHHHHHhhccCCccceEEEEEEEcCCC-CEEEEEEcCC
Confidence 000011112233334443 988 88888888888775 4445551 12359999999999876 7999999999
Q ss_pred CCCC
Q 010065 375 FGDP 378 (519)
Q Consensus 375 ~G~~ 378 (519)
+||+
T Consensus 315 ~gGg 318 (361)
T 2r7k_A 315 VDGG 318 (361)
T ss_dssp BCGG
T ss_pred CCCC
Confidence 9775
No 57
>3df7_A Putative ATP-grAsp superfamily protein; putative protein, PSI-II, nysgrc., structural genomics, protein structure initiative; 1.87A {Archaeoglobus fulgidus}
Probab=99.95 E-value=2.7e-27 Score=235.90 Aligned_cols=208 Identities=20% Similarity=0.244 Sum_probs=162.5
Q ss_pred HHHHHHHHHcCCcEEEE--CCChhhHHHHHHHHHHCCCCeeCCcHHHHHHhcCHHHHHHHHHHcCCCCCCeeecCCHHHH
Q 010065 137 DAVISFCRKWSVGLVVV--GPEAPLVSGLANKLVKAGIPTFGPSSEAAALEGSKNFMKNLCDKYGIPTAKYKTFTDPNAA 214 (519)
Q Consensus 137 ~~l~~~~~~~~id~Vi~--g~E~~~~~~~a~~le~~gip~~g~~~~~~~~~~dK~~~k~~l~~~Gi~~p~~~~v~~~~~~ 214 (519)
+.+.++++ ++|++++ .+|++.++++.+.++..| +++|++++++++++||..+++++++ |||+|++..
T Consensus 61 ~~l~~~~~--~~D~~~~i~~~ed~~l~~~~~~l~~~g-~~~g~~~~~~~~~~dK~~~~~~l~~-Gip~p~~~~------- 129 (305)
T 3df7_A 61 DSMEKYLE--KSDAFLIIAPEDDFLLYTLTKKAEKYC-ENLGSSSRAIAVTSDKWELYKKLRG-EVQVPQTSL------- 129 (305)
T ss_dssp GGHHHHHT--TCSEEEEECCCGGGHHHHHHHHHHTTS-EESSCCHHHHHHHTSHHHHHHHHTT-TSCCCCEES-------
T ss_pred HHHHHHHH--hcCEEEEEccCCcHHHHHHHHHHHhcC-CccCCCHHHHHHhcCHHHHHHHHHh-CCCCCCEec-------
Confidence 44555554 5666665 578998888888888878 7889999999999999999999999 999999875
Q ss_pred HHHHHHhCCCEEEEeCCCCCCCcEEEeCCHHHHHHHHHHHHhhccCCCCCCcEEEEeccCCcEEEEEEEEeCCeeEEecc
Q 010065 215 KQYIQEEGAPIVVKADGLAAGKGVIVAMTLEEAYEAVDSMLLKNAFGSAGCRVIIEEFLEGEEASFFALVDGENAIPLES 294 (519)
Q Consensus 215 ~~~~~~~g~P~VvKP~~g~gs~GV~~v~~~~el~~a~~~~~~~~~~~~~~~~~lvEe~I~G~E~sv~~l~dg~~~~~~~~ 294 (519)
++++||+|+||.+|+||.||+++++ .+..+|+|+||+|+|+++.++.+ +.+.++..
T Consensus 130 ----~~~~~P~vvKP~~g~gs~Gv~~v~~-------------------~~~~~lvEe~I~G~e~sv~v~~g-~~~~~~~~ 185 (305)
T 3df7_A 130 ----RPLDCKFIIKPRTACAGEGIGFSDE-------------------VPDGHIAQEFIEGINLSVSLAVG-EDVKCLSV 185 (305)
T ss_dssp ----SCCSSSEEEEESSCC----CBCCSS-------------------CCTTEEEEECCCSEEEEEEEEES-SSEEEEEE
T ss_pred ----ccCCCCEEEEeCCCCCCCCEEEEec-------------------CCCCEEEEeccCCcEEEEEEEeC-CeEEEEEE
Confidence 2578999999999999999999988 13689999999999999999974 44554443
Q ss_pred ccccccccCCCCCCCCCCceEEecCCCCCHHHHHHHHHHHHHHHHHHHHHc-CCCeeeEEEEEEEEEcCCCceEEEEEeC
Q 010065 295 AQDHKRVGDGDTGPNTGGMGAYSPAPVLTKELQSVVMESIILPTVKGMSAE-GCKFVGVLYAGLMIEKKSGLPKLIEYNV 373 (519)
Q Consensus 295 ~~~~~~~~~~~~~~~~g~~~~~~P~~~l~~~~~~~i~~~a~~~~~~~~~a~-g~~~~G~~~vdf~~~~~g~~~~viEiN~ 373 (519)
.......+. ..+...|+. ++++..+++++.+ .+++.++ |+. |++++||+++ + ++|++||||
T Consensus 186 ~~~~~~~~~--------~~g~~~p~~-l~~~~~~~i~~~a----~~~~~~l~g~~--G~~~vD~~~~-~--~~~viEiNp 247 (305)
T 3df7_A 186 NEQIINNFR--------YAGAVVPAR-ISDEVKREVVEEA----VRAVECVEGLN--GYVGVDIVYS-D--QPYVIEINA 247 (305)
T ss_dssp EEEEEETTE--------EEEEEESCC-CCHHHHHHHHHHH----HHHHTTSTTCC--EEEEEEEEES-S--SEEEEEEES
T ss_pred eeEeccCce--------eccccccCC-CCHHHHHHHHHHH----HHHHHHcCCCc--CceEEEEEEC-C--CEEEEEEcC
Confidence 332221111 124577888 8988888888876 4677888 877 9999999996 4 499999999
Q ss_pred CCCCCchHHHHHHhCCCHHHHHHHH
Q 010065 374 RFGDPECQVLMVRLESDLAEVLLAA 398 (519)
Q Consensus 374 R~G~~~~~~~~~~~G~d~~~~~i~~ 398 (519)
|||++.. .+...+|+|+.++++++
T Consensus 248 R~~~~~~-~~~~~~G~~~~~~~~~~ 271 (305)
T 3df7_A 248 RLTTPVV-AFSRAYGASVADLLAGG 271 (305)
T ss_dssp SCCGGGG-GHHHHHSCCHHHHHTTC
T ss_pred CCCCCHH-HHHHHHCCCHHHHHHhc
Confidence 9998765 55666799999999987
No 58
>1gsa_A Glutathione synthetase; ligase; HET: ADP GSH; 2.00A {Escherichia coli} SCOP: c.30.1.3 d.142.1.1 PDB: 1gsh_A 2glt_A 1glv_A
Probab=99.93 E-value=9.4e-25 Score=218.29 Aligned_cols=297 Identities=10% Similarity=0.092 Sum_probs=193.1
Q ss_pred eeEEEeeccCCCCCcccccCCCCCCCccEEEEEeCChhHHHHHHHHHhcCCCcEEEEecCCCCCcCC---CCCcccc-CC
Q 010065 56 FFSTVKCLAQKSQPSVSVNAPTNAGQRVVVLVIGGGGREHALCYALKRSHSCDAVFCAPGNAGISNS---GDATCIP-DL 131 (519)
Q Consensus 56 ~~i~v~~GG~s~e~~vS~~s~~~~~~~~~vliiG~g~~~~~l~~~l~~~~g~~~v~~~~~~~~~~~~---~~~~~v~-~~ 131 (519)
|||+|++||.|.| ++|..|+.. ++.++++. |++++.+++++...... .....+. .-
T Consensus 2 m~i~il~~~~~~~-~~~~~s~~~------------------l~~a~~~~-G~~v~~~d~~~~~~~~~~~~~~~~~~~~~~ 61 (316)
T 1gsa_A 2 IKLGIVMDPIANI-NIKKDSSFA------------------MLLEAQRR-GYELHYMEMGDLYLINGEARAHTRTLNVKQ 61 (316)
T ss_dssp CEEEEECSCGGGC-CTTTCHHHH------------------HHHHHHHT-TCEEEEECGGGEEEETTEEEEEEEEEEECS
T ss_pred ceEEEEeCcHHhC-CcCCChHHH------------------HHHHHHHC-CCEEEEEchhHeEEECCeEEEEEeeeEecc
Confidence 6999999999876 688776533 67888776 99999887653211100 0000000 00
Q ss_pred CCCC-HH-HHHHHHHHcCCcEEEECCCh-----h-hHHHHHHHHHHCCCCeeCCcHHHHHHhcCHHHHHHHHHHcCCCCC
Q 010065 132 DVLD-GD-AVISFCRKWSVGLVVVGPEA-----P-LVSGLANKLVKAGIPTFGPSSEAAALEGSKNFMKNLCDKYGIPTA 203 (519)
Q Consensus 132 d~~d-~~-~l~~~~~~~~id~Vi~g~E~-----~-~~~~~a~~le~~gip~~g~~~~~~~~~~dK~~~k~~l~~~Gi~~p 203 (519)
+... .+ .........++|+|++..+. . ....+.+.++..|+|++ ++++++.+++||..++++++ |+|
T Consensus 62 ~~~~~~~~~~~~~~~~~~~d~v~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~-~~~~~~~~~~dK~~~~~~l~----~~P 136 (316)
T 1gsa_A 62 NYEEWFSFVGEQDLPLADLDVILMRKDPPFDTEFIYATYILERAEEKGTLIV-NKPQSLRDCNEKLFTAWFSD----LTP 136 (316)
T ss_dssp CSSCCEEEEEEEEEEGGGSSEEEECCCCCCCHHHHHHHHHHHHHHHTTCEEE-SCHHHHHHCCTTGGGGGGTT----TSC
T ss_pred CcccceeccCccccccccCCEEEEecCCCCchhhHHHHHHHHHHHHcCCeEe-cCHHHHHhhhhHHHHHhhhh----cCC
Confidence 0000 00 00000011368999984221 1 22356677778999987 78999999999999999988 999
Q ss_pred CeeecCCHHHHHHHHHHhCCCEEEEeCCCCCCCcEEEeC-CHHHHHHHHHHHHhhccCCCCCCcEEEEeccCC-cEEEEE
Q 010065 204 KYKTFTDPNAAKQYIQEEGAPIVVKADGLAAGKGVIVAM-TLEEAYEAVDSMLLKNAFGSAGCRVIIEEFLEG-EEASFF 281 (519)
Q Consensus 204 ~~~~v~~~~~~~~~~~~~g~P~VvKP~~g~gs~GV~~v~-~~~el~~a~~~~~~~~~~~~~~~~~lvEe~I~G-~E~sv~ 281 (519)
++..+.+.+++.+++++++ |+|+||..|++|+||.+++ +.+++..+++.+.. .....+|+|+||+| +++++.
T Consensus 137 ~t~~~~~~~~~~~~~~~~~-p~vvKP~~g~~g~Gv~~v~~~~~~l~~~~~~~~~-----~~~~~~lvqe~i~~~~~~~~~ 210 (316)
T 1gsa_A 137 ETLVTRNKAQLKAFWEKHS-DIILKPLDGMGGASIFRVKEGDPNLGVIAETLTE-----HGTRYCMAQNYLPAIKDGDKR 210 (316)
T ss_dssp CEEEESCHHHHHHHHHHHS-SEEEECSSCCTTTTCEEECTTCTTHHHHHHHHTT-----TTTSCEEEEECCGGGGGCEEE
T ss_pred CeEEeCCHHHHHHHHHHcC-CEEEEECCCCCcccEEEecCChHHHHHHHHHHHh-----cCCceEEEecccCCCCCCCEE
Confidence 9999999999988888899 9999999999999999998 88898888776532 12368999999998 356666
Q ss_pred EEEeCCeeEEeccccccccccCCCCCCCCCCceEEecCCCCCHHHHHHHHHHHHHHHHHHHHHcCCCeeeEEEEEEEEEc
Q 010065 282 ALVDGENAIPLESAQDHKRVGDGDTGPNTGGMGAYSPAPVLTKELQSVVMESIILPTVKGMSAEGCKFVGVLYAGLMIEK 361 (519)
Q Consensus 282 ~l~dg~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~P~~~l~~~~~~~i~~~a~~~~~~~~~a~g~~~~G~~~vdf~~~~ 361 (519)
++..++.++.+...+.. ...++...++.|+. ..|.+ ++++..+...+ +.+++.++|+. ++++||+
T Consensus 211 v~~~~g~~~~~~~~r~~-~~~~~~~~~~~gg~--~~~~~-~~~~~~~~a~~-----~~~~l~~~g~~---~~~vD~~--- 275 (316)
T 1gsa_A 211 VLVVDGEPVPYCLARIP-QGGETRGNLAAGGR--GEPRP-LTESDWKIARQ-----IGPTLKEKGLI---FVGLDII--- 275 (316)
T ss_dssp EEEETTEECSEEEEEEC-CSSCSCCCGGGTCE--EEEEE-CCHHHHHHHHH-----HHHHHHHTTCC---EEEEEEE---
T ss_pred EEEECCEEeeeEEEEeC-CCCCceeEEccCCc--cccCC-CCHHHHHHHHH-----HHHHHHhCCCc---EEEEEec---
Confidence 56534434321222211 11122333444543 34665 66654432222 23455567764 4569998
Q ss_pred CCCceEEEEEeCCCCCCchHHHHHHhCCCHHHHHHHHHhCC
Q 010065 362 KSGLPKLIEYNVRFGDPECQVLMVRLESDLAEVLLAACRGE 402 (519)
Q Consensus 362 ~g~~~~viEiN~R~G~~~~~~~~~~~G~d~~~~~i~~~~g~ 402 (519)
| +||+|||+|.++.. ..+...+|+|+.+++++++.+.
T Consensus 276 -g--~~~iEvN~r~~~~~-~~~~~~~g~~~~~~~~~~~~~~ 312 (316)
T 1gsa_A 276 -G--DRLTEINVTSPTCI-REIEAEFPVSITGMLMDAIEAR 312 (316)
T ss_dssp -T--TEEEEEECSSCCCH-HHHHHHSSCCHHHHHHHHHHHH
T ss_pred -C--CEEEEEcCCCCcch-HHHHHhhCcCHHHHHHHHHHHH
Confidence 5 58999999842112 2344567999999999988765
No 59
>2pbz_A Hypothetical protein; NYSGXRC, PSI-II, IMP biosynthesis, ATP binding protein, PURP structural genomics, protein structure initiative; HET: ATP; 2.50A {Thermococcus kodakarensis} SCOP: c.30.1.8 d.142.1.9
Probab=99.90 E-value=6.7e-24 Score=210.79 Aligned_cols=251 Identities=14% Similarity=0.095 Sum_probs=155.0
Q ss_pred cEEEEEeCChhHHHHHHHHHhcCCCcEEEEecCCCC----CcCCCCCccccCCC-CCCHHHHHHHHHHcCCcEEEECCCh
Q 010065 83 VVVLVIGGGGREHALCYALKRSHSCDAVFCAPGNAG----ISNSGDATCIPDLD-VLDGDAVISFCRKWSVGLVVVGPEA 157 (519)
Q Consensus 83 ~~vliiG~g~~~~~l~~~l~~~~g~~~v~~~~~~~~----~~~~~~~~~v~~~d-~~d~~~l~~~~~~~~id~Vi~g~E~ 157 (519)
++|.++|+| ....+++++++. |++++++++.... ....++ ..+ ..| .+| ++ ...|+|++..|.
T Consensus 3 ~~I~~lGsg-l~~~~~~aAk~l-G~~viv~d~~~~~p~~~a~~~ad-~~~-~~~~~~d------l~--~~~dvitpe~e~ 70 (320)
T 2pbz_A 3 LIVSTIASH-SSLQILLGAKKE-GFKTRLYVSPKRRPFYSSLPIVD-DLV-VAEEMTS------IL--NDDGIVVPHGSF 70 (320)
T ss_dssp -CEEEESST-THHHHHHHHHHT-TCCEEEEECTTTHHHHHTCTTCS-EEE-ECSCSCC------TT--CCSSBCCCBTTH
T ss_pred eEEEEEcCH-hHHHHHHHHHHC-CCEEEEEECCCCCccchhhhcCC-eEE-ECCcHHH------HH--hcCCEEEecccc
Confidence 569999999 777888888777 9999999876321 111222 222 345 334 22 234777776674
Q ss_pred hhHHHHHHHHHHCCCCeeCCcHHHHHHhcCHHHHHHHHHHcCCCCCCeeecCCHHHHHHHHHHhCCCEEEEeCCCCCCCc
Q 010065 158 PLVSGLANKLVKAGIPTFGPSSEAAALEGSKNFMKNLCDKYGIPTAKYKTFTDPNAAKQYIQEEGAPIVVKADGLAAGKG 237 (519)
Q Consensus 158 ~~~~~~a~~le~~gip~~g~~~~~~~~~~dK~~~k~~l~~~Gi~~p~~~~v~~~~~~~~~~~~~g~P~VvKP~~g~gs~G 237 (519)
..... .+.+++.|+|++ ++.++.....||...+++|+++|||+|++.. .+++ +++||+||||.+++||+|
T Consensus 71 v~~~~-l~~le~~~~p~~-p~~~~l~~~~dr~~~~~~l~~~Gip~P~~~~---~ee~-----~i~~PviVKp~~g~ggkG 140 (320)
T 2pbz_A 71 VAYLG-IEAIEKAKARFF-GNRRFLKWETTFELQDKALEGAGIPRVEVVE---PEDA-----KPDELYFVRIEGPRGGSG 140 (320)
T ss_dssp HHHSC-HHHHHTCCSCCB-SCSSGGGGGSCHHHHHHHHHHHTCCBCCBCC---SCCC-----CSSCCEEEECC-------
T ss_pred hhHHH-HHHHHHcCCCcC-CCHHHHHHHHhHHHHHHHHHHCCcCCCCeeC---HhHc-----CcCCcEEEEECCCCCCCC
Confidence 33222 334678999987 7788899999999999999999999999873 3333 479999999999999999
Q ss_pred EEEeCCHHHHHHHHHHHHhhccCCCCCCcEEEEeccCCcEEEEEEEEe---CCeeEEecccccc---ccccCC-CCCCCC
Q 010065 238 VIVAMTLEEAYEAVDSMLLKNAFGSAGCRVIIEEFLEGEEASFFALVD---GENAIPLESAQDH---KRVGDG-DTGPNT 310 (519)
Q Consensus 238 V~~v~~~~el~~a~~~~~~~~~~~~~~~~~lvEe~I~G~E~sv~~l~d---g~~~~~~~~~~~~---~~~~~~-~~~~~~ 310 (519)
+++++| +|+..+++.+ +.+++|||||+|.+++..++.+ |+ +..+....+. ...+.. ...+..
T Consensus 141 ~~~v~~-eel~~~~~~~---------~~~~IiEEfI~g~~~~~~~f~~~~~g~-~e~~~~~~r~e~~~g~~~~p~~~~~~ 209 (320)
T 2pbz_A 141 HFIVEG-SELEERLSTL---------EEPYRVERFIPGVYLYVHFFYSPILER-LELLGVDERVLIADGNARWPVKPLPY 209 (320)
T ss_dssp -----C-EECSCCCC-------------CCEEEECCCSCEEEEEEEEETTTTE-EEEEEEEEEEETTCSSSSSCCSCCCC
T ss_pred EEEECh-HHHHHHHHhc---------CCCEEEEeeeceEecceeEEeccccCc-eeEEEecceEEEECCeeecccCCCce
Confidence 999999 9986654332 1579999999998887555542 32 2222221111 111110 001111
Q ss_pred CCceEEecCCCCCHHHHHHHHHHHHHHHHHHHHHc------CCCeeeEEEEEEEEEcCCCceEEEEEeCCCCC
Q 010065 311 GGMGAYSPAPVLTKELQSVVMESIILPTVKGMSAE------GCKFVGVLYAGLMIEKKSGLPKLIEYNVRFGD 377 (519)
Q Consensus 311 g~~~~~~P~~~l~~~~~~~i~~~a~~~~~~~~~a~------g~~~~G~~~vdf~~~~~g~~~~viEiN~R~G~ 377 (519)
...++. |+. +++++.+++.+.+.+ ++.++ ++. |++++| +++++ ++|++|||||++|
T Consensus 210 ~~~G~~-P~~-~~~~~~~~a~~~a~~----i~~~L~~l~~~g~~--G~~~vE--~~~dg-~~~v~EIapR~~G 271 (320)
T 2pbz_A 210 TIVGNR-AIA-LRESLLPQLYDYGLA----FVRTMRELEPPGVI--GPFALH--FAYDG-SFKAIGIASRIDG 271 (320)
T ss_dssp CEEEEE-ECE-ECGGGHHHHHHHHHH----HHHHHHHHSTTCCC--SEEEEE--EECSS-SCEEEEEESSBCS
T ss_pred eeecCC-CCc-cCHHHHHHHHHHHHH----HHHHHHhhccCCce--eeEEEE--EcCCC-cEEEEEecCCCCC
Confidence 122233 777 777777777776643 44444 654 999999 56665 6999999999855
No 60
>3ln7_A Glutathione biosynthesis bifunctional protein GSH; gamma-glutamylcysteine ligase domain, ATP-grAsp domain, HYBR enzyme, ATP-binding; 3.20A {Pasteurella multocida}
Probab=99.88 E-value=1.7e-22 Score=221.42 Aligned_cols=246 Identities=17% Similarity=0.160 Sum_probs=178.9
Q ss_pred CHHHHHHHHHHcCCcEEEECCChhhH-HHHHHHHHH--CCCCeeCCcHHHHHHhcCHHHHHHHHHHcCCCCCCeeecCCH
Q 010065 135 DGDAVISFCRKWSVGLVVVGPEAPLV-SGLANKLVK--AGIPTFGPSSEAAALEGSKNFMKNLCDKYGIPTAKYKTFTDP 211 (519)
Q Consensus 135 d~~~l~~~~~~~~id~Vi~g~E~~~~-~~~a~~le~--~gip~~g~~~~~~~~~~dK~~~k~~l~~~Gi~~p~~~~v~~~ 211 (519)
+.+.|+++|++.++|+++.+.|..++ .+..+.++. .+++..+++..++.++.||..+|++|+++|||+|++..+.+.
T Consensus 434 st~~Iv~~A~~~gid~~vlg~e~~l~~lg~~~~~~~ig~~~~t~~~s~~aa~~~~DK~~tk~lL~~~GIPvP~~~~~~~~ 513 (757)
T 3ln7_A 434 STQALLFDVIQKGIHTEILDENDQFLCLKYGDHIEYVKNGNMTSHDSYISPLIMENKVVTKKVLQKAGFNVPQSVEFTSL 513 (757)
T ss_dssp HHHHHHHHHHHHTCEEEEEETTTTEEEEEETTEEEEEETTTBCSSSBSHHHHHHHHSHHHHHHHHHHTCCCCCEEEESCH
T ss_pred CHHHHHHHHHHhCCCEEEECCCHHHHHhcccccceeeccCccCCCCHHHHHHHhcCHHHHHHHHHHCCcCCCCEEEECCH
Confidence 37899999999999999998777653 122222332 355566778899999999999999999999999999999999
Q ss_pred HHHHHHH-HHhCCCEEEEeCCCCCCCcEEEe----CCHHHHHHHHHHHHhhccCCCCCCcEEEEeccCCcEEEEEEEEeC
Q 010065 212 NAAKQYI-QEEGAPIVVKADGLAAGKGVIVA----MTLEEAYEAVDSMLLKNAFGSAGCRVIIEEFLEGEEASFFALVDG 286 (519)
Q Consensus 212 ~~~~~~~-~~~g~P~VvKP~~g~gs~GV~~v----~~~~el~~a~~~~~~~~~~~~~~~~~lvEe~I~G~E~sv~~l~dg 286 (519)
+++.+++ +.+|||+||||..|++|+||.++ ++.+|+.++++.++. .+..++|||||+|+|++|.++ +|
T Consensus 514 ~ea~~~~~~~~g~PvVVKP~~g~~G~GV~iv~~~v~~~eel~~al~~a~~------~~~~vlVEefI~G~Ei~v~Vl-gg 586 (757)
T 3ln7_A 514 EKAVASYALFENRAVVIKPKSTNYGLGITIFQQGVQNREDFAKALEIAFR------EDKEVMVEDYLVGTEYRFFVL-GD 586 (757)
T ss_dssp HHHHHGGGGSSSSCEEEEESSCSTTTTCEECSSCCCCHHHHHHHHHHHHH------HCSSEEEEECCCSEEEEEEEE-TT
T ss_pred HHHHHHHHHhcCCCEEEEeCCCCCCCCeEEecCCCCCHHHHHHHHHHHHh------cCCcEEEEEcCCCcEEEEEEE-CC
Confidence 9887666 67899999999999999999999 899999999988764 356899999999999999887 44
Q ss_pred CeeEEecccccc-------------------c--c--------------------------------------ccCCCCC
Q 010065 287 ENAIPLESAQDH-------------------K--R--------------------------------------VGDGDTG 307 (519)
Q Consensus 287 ~~~~~~~~~~~~-------------------~--~--------------------------------------~~~~~~~ 307 (519)
+ +++....... . + .......
T Consensus 587 k-vvaai~R~p~~VvGDG~~ti~eLi~~~n~~p~rg~~~~~~l~~I~ld~~~~~~L~~~g~~~d~Vp~~Ge~v~L~~~~N 665 (757)
T 3ln7_A 587 E-TLAVLLRVPANVVGDSVHSVAELVAMKNDHPLRGDGSRTPLKKIALGEIEQLQLKEQGLTIDSIPAKDQLVQLRANSN 665 (757)
T ss_dssp E-EEEEEEECCSEEEGGGCCCHHHHHHHHHTSTTEECSSSSSEECCCCCHHHHHHHHHHTCCSSSCCCSSCEEECCSSCC
T ss_pred E-EEEEEEEecccccCCCcccHHHHHHhhcccccccccccCccccccccHHHHHHHHHcCCCccccCCCCCEEEeecccc
Confidence 3 4433221110 0 0 0011233
Q ss_pred CCCCCceEEecCCCCCHHHHHHHHHHHHHHHHHHHHHcCCCeeeEEEEEEEEEc-------CCCceEEEEEeCCCCCCch
Q 010065 308 PNTGGMGAYSPAPVLTKELQSVVMESIILPTVKGMSAEGCKFVGVLYAGLMIEK-------KSGLPKLIEYNVRFGDPEC 380 (519)
Q Consensus 308 ~~~g~~~~~~P~~~l~~~~~~~i~~~a~~~~~~~~~a~g~~~~G~~~vdf~~~~-------~g~~~~viEiN~R~G~~~~ 380 (519)
.++|+...-+-.. ++++..+...+ +.+++|+.+.| ||++.++ +++.+.|||+|++||...+
T Consensus 666 ls~GG~~~dvtd~-i~p~~~~~a~~--------aa~~lGl~~~G---vDli~~di~~p~~~~~~~~~iiEvN~~P~~~~h 733 (757)
T 3ln7_A 666 ISTGGDSIDMTDE-MHESYKQLAVG--------ITKAMGAAVCG---VDLIIPDLKQPATPNLTSWGVIEANFNPMMMMH 733 (757)
T ss_dssp GGGTCCEEECTTT-SCHHHHHHHHH--------HHHHHTCSEEE---EEEEESCSSSCCCSSTTTCEEEEEESSCCHHHH
T ss_pred cccCccceecccc-CCHHHHHHHHH--------HHHHhCCCEEE---EEEEecCccccccccCCCeEEEEEcCCcchhhh
Confidence 4556554433223 56655444333 44778987655 9999873 2224899999999986433
Q ss_pred HHHHHH--hCCCHHHHHHHHHhCC
Q 010065 381 QVLMVR--LESDLAEVLLAACRGE 402 (519)
Q Consensus 381 ~~~~~~--~G~d~~~~~i~~~~g~ 402 (519)
+.|. .|.|+...+++.+...
T Consensus 734 --~~p~~g~~~~v~~~ii~~lfp~ 755 (757)
T 3ln7_A 734 --IFPYAGKSRRLTQNVIKMLFPE 755 (757)
T ss_dssp --HSCSSSCCCCCHHHHHHHHCTT
T ss_pred --hccccCCCCchHHHHHHHhcCC
Confidence 3332 4899999999887644
No 61
>1z2n_X Inositol 1,3,4-trisphosphate 5/6-kinase; inositol phosphate kinase, ATP-grAsp, transferase; HET: ADP; 1.20A {Entamoeba histolytica} PDB: 1z2o_X* 1z2p_X*
Probab=99.87 E-value=7.1e-21 Score=191.20 Aligned_cols=206 Identities=12% Similarity=0.099 Sum_probs=140.9
Q ss_pred CCcEEEEC--CChhhHHHHHHHHHH--CCCCeeCCcHHHHHHhcCHHHHHHHHHHcCCCCCCeeecCCHHHHHHHHHHhC
Q 010065 147 SVGLVVVG--PEAPLVSGLANKLVK--AGIPTFGPSSEAAALEGSKNFMKNLCDKYGIPTAKYKTFTDPNAAKQYIQEEG 222 (519)
Q Consensus 147 ~id~Vi~g--~E~~~~~~~a~~le~--~gip~~g~~~~~~~~~~dK~~~k~~l~~~Gi~~p~~~~v~~~~~~~~~~~~~g 222 (519)
++|+|++. ++...+....+.++. .|+|++ ++++++.+++||..++++|+++|||+|++..+.+.+++.++++..+
T Consensus 55 ~~d~v~~~~~~~~~~~~~~l~~~~~~~~g~~~~-~~~~~~~~~~dK~~~~~~l~~~gi~~P~~~~~~~~~~~~~~~~~~~ 133 (324)
T 1z2n_X 55 EPNAIITKRTHPVGKMADEMRKYEKDHPKVLFL-ESSAIHDMMSSREEINALLIKNNIPIPNSFSVKSKEEVIQLLQSKQ 133 (324)
T ss_dssp CCSEEEECCSCSSSHHHHHHHHHHHHCTTSEEE-TCHHHHHHHTBHHHHHHHHHHTTCCCSCEEEESSHHHHHHHHHTTC
T ss_pred CceEEEEeccchHHHHHHHHHHHHHhCCCCeEe-CCHHHHHHHhCHHHHHHHHHHCCCCCCCEEEeCCHHHHHHHHHHcC
Confidence 68989983 454433344344444 789975 8999999999999999999999999999999999998888877754
Q ss_pred --CCEEEEeCCCCCC---CcEEEeCCHHHHHHHHHHHHhhccCCCCCCcEEEEeccCC--cEEEEEEEEeCCeeEEeccc
Q 010065 223 --APIVVKADGLAAG---KGVIVAMTLEEAYEAVDSMLLKNAFGSAGCRVIIEEFLEG--EEASFFALVDGENAIPLESA 295 (519)
Q Consensus 223 --~P~VvKP~~g~gs---~GV~~v~~~~el~~a~~~~~~~~~~~~~~~~~lvEe~I~G--~E~sv~~l~dg~~~~~~~~~ 295 (519)
||+|+||..|.|| .|+.++++.+++.. .+..+++|+||+| .++++.++ |+.+......
T Consensus 134 ~~~P~vvKP~~g~g~~~s~gv~~v~~~~~l~~-------------~~~~~lvqe~i~~~g~~~~v~v~--g~~~~~~~~~ 198 (324)
T 1z2n_X 134 LILPFIVKPENAQGTFNAHQMKIVLEQEGIDD-------------IHFPCLCQHYINHNNKIVKVFCI--GNTLKWQTRT 198 (324)
T ss_dssp SCSSEEEEESBCSSSSGGGEEEEECSGGGGTT-------------CCSSEEEEECCCCTTCEEEEEEE--TTEEEEEEEC
T ss_pred CCCCEEEeeCCCCCCccceeeEEEeCHHHHhh-------------cCCCEEEEEccCCCCcEEEEEEE--CCEEEEEEec
Confidence 9999999999888 99999999877542 2478999999974 67777555 3333332111
Q ss_pred ccc---------ccccCCC---------------------CCCC-CCCc-eEEecCCCCCHHHHHHHHHHHHHHHHHHHH
Q 010065 296 QDH---------KRVGDGD---------------------TGPN-TGGM-GAYSPAPVLTKELQSVVMESIILPTVKGMS 343 (519)
Q Consensus 296 ~~~---------~~~~~~~---------------------~~~~-~g~~-~~~~P~~~l~~~~~~~i~~~a~~~~~~~~~ 343 (519)
... ..+|++. .++. .... +...|.. ++. +++++.+ .++++
T Consensus 199 ~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~-~~~---~~i~~~a----~~~~~ 270 (324)
T 1z2n_X 199 SLPNVHRCGIKSVDFNNQHLEDILSWPEGVIDKQDIIENSANRFGSKILEDPILLNL-TSE---AEMRDLA----YKVRC 270 (324)
T ss_dssp CCCCCCCSSCCEEEEETTBGGGGGGSCTTSSCHHHHHHHHTTTTCCCBCSCTTTTTS-CCH---HHHHHHH----HHHHH
T ss_pred CcccccCCCccceeeccccchhhhccccccccccccccccccchhhccccCCccccC-CCH---HHHHHHH----HHHHH
Confidence 000 0011111 0000 0000 1112333 442 2444444 35668
Q ss_pred HcCCCeeeEEEEEEEEEc-CCCceEEEEEeCCCCCCch
Q 010065 344 AEGCKFVGVLYAGLMIEK-KSGLPKLIEYNVRFGDPEC 380 (519)
Q Consensus 344 a~g~~~~G~~~vdf~~~~-~g~~~~viEiN~R~G~~~~ 380 (519)
++|+. ++++||++++ +| ++||+|||+|||++..
T Consensus 271 ~lg~~---~~~vD~~~~~~~g-~~~vlEvN~~Pg~~~~ 304 (324)
T 1z2n_X 271 ALGVQ---LCGIDFIKENEQG-NPLVVDVNVFPSYGGK 304 (324)
T ss_dssp HHTCS---EEEEEEECGGGCS-SCEEEEEEESCCTTSC
T ss_pred HhCCc---EEeeEEEEEcCCC-CEEEEEEcCCCCcCCC
Confidence 88875 4679999984 45 7999999999998776
No 62
>3ln6_A Glutathione biosynthesis bifunctional protein GSH; gamma-glutamyl cysteine ligase domain, ATP-grAsp domain, HYB enzyme; 2.95A {Streptococcus agalactiae serogroup V}
Probab=99.84 E-value=9.3e-21 Score=208.21 Aligned_cols=242 Identities=20% Similarity=0.239 Sum_probs=169.3
Q ss_pred HHHHHHHHHHcCCcEEEECCChhhHHH-HHHHHHH--CCCCeeCCcHHHHHHh-cCHHHHHHHHHHcCCCCCCeeecCCH
Q 010065 136 GDAVISFCRKWSVGLVVVGPEAPLVSG-LANKLVK--AGIPTFGPSSEAAALE-GSKNFMKNLCDKYGIPTAKYKTFTDP 211 (519)
Q Consensus 136 ~~~l~~~~~~~~id~Vi~g~E~~~~~~-~a~~le~--~gip~~g~~~~~~~~~-~dK~~~k~~l~~~Gi~~p~~~~v~~~ 211 (519)
.+.|++.+++.++++++.+.+..+++. .....+. .| .++|++..++... .||..+|++|+++|||+|++..+.+.
T Consensus 430 ~~~l~~aA~~~Gi~v~vidp~~~l~~l~~~~~~~~~~~g-~itg~~~~~a~~~~~DK~~tk~lL~~~GIPvP~~~~~~~~ 508 (750)
T 3ln6_A 430 TQLLLFDVIQKGVNFEVLDEQDQFLKLWHNSHIEYVKNG-NMTSKDNYIVPLAMANKVVTKKILDEKHFPTPFGDEFTDR 508 (750)
T ss_dssp HHHHHHHHHHHTCEEEESCSSSCEEEEEETTEEEEEETT-TBCTTSCTHHHHHTTTSHHHHHHHHHTTCCCCCCCCEETT
T ss_pred HHHHHHHHHhCCCCEEEECCCchHhhhccCCCcEEEecC-CeeCCCHHHHHHHHhCHHHHHHHHHHCCcCCCCEEEECCH
Confidence 688999999999999888766544310 0000010 12 2346666655555 59999999999999999999999998
Q ss_pred HHHHHHH-HHhCCCEEEEeCCCCCCCcEEEeC---CHHHHHHHHHHHHhhccCCCCCCcEEEEeccCCcEEEEEEEEeCC
Q 010065 212 NAAKQYI-QEEGAPIVVKADGLAAGKGVIVAM---TLEEAYEAVDSMLLKNAFGSAGCRVIIEEFLEGEEASFFALVDGE 287 (519)
Q Consensus 212 ~~~~~~~-~~~g~P~VvKP~~g~gs~GV~~v~---~~~el~~a~~~~~~~~~~~~~~~~~lvEe~I~G~E~sv~~l~dg~ 287 (519)
+++.+++ +.+|||+||||..|++|+||.+++ +.+|+.++++.++. .+..+||||||+|+|++|.++ +|+
T Consensus 509 ~ea~~~~~~~~g~PvVVKP~~G~~G~GV~iv~~~~s~eel~~a~~~~~~------~~~~vlVEefI~G~E~~v~Vv-gg~ 581 (750)
T 3ln6_A 509 KEALNYFSQIQDKPIVVKPKSTNFGLGISIFKTSANLASYEKAIDIAFT------EDSAILVEEYIEGTEYRFFVL-EGD 581 (750)
T ss_dssp TTHHHHHHHSSSSCEEEEETTCCSSSSCEEESSCCCHHHHHHHHHHHHH------HCSEEEEEECCCSEEEEEEEE-TTE
T ss_pred HHHHHHHHHhcCCcEEEEeCCCCCCCCEEEEeCCCCHHHHHHHHHHHHh------hCCcEEEEeccCCCEEEEEEE-CCE
Confidence 8887777 678999999999999999999998 99999999998764 357899999999999999887 443
Q ss_pred eeEEeccccccc---------------------c--------------------------------------ccCCCCCC
Q 010065 288 NAIPLESAQDHK---------------------R--------------------------------------VGDGDTGP 308 (519)
Q Consensus 288 ~~~~~~~~~~~~---------------------~--------------------------------------~~~~~~~~ 308 (519)
+++........ + ........
T Consensus 582 -vvaa~~r~p~~v~GdG~~tI~eLI~~~n~dp~rg~~~~~~l~~i~~d~~~~~~l~~~g~~~~~V~~~Ge~v~L~~~~Nl 660 (750)
T 3ln6_A 582 -CIAVLLRVAANVVGDGIHTISQLVKLKNQNPLRGYDHRSPLEVIELGEVEQLMLEQQGYTVNSIPPEGTKIELRRNSNI 660 (750)
T ss_dssp -EEEEEEEECCEEECCTTCCHHHHHHHHTTCTTEESSSCCSEECCCCCHHHHHHHHHTTCCSSCCCCTTCEEESCSSCCT
T ss_pred -EEEEEEEecceEecCCccCHHHHHHhhccCccccccccCccccccccHHHHHHHHHcCCCccccCCCCCEEEEeecccc
Confidence 33322111000 0 00112334
Q ss_pred CCCCceEEecCCCCCHHHHHHHHHHHHHHHHHHHHHcCCCeeeEEEEEEEEEc-------CCCceEEEEEeCCCCCCchH
Q 010065 309 NTGGMGAYSPAPVLTKELQSVVMESIILPTVKGMSAEGCKFVGVLYAGLMIEK-------KSGLPKLIEYNVRFGDPECQ 381 (519)
Q Consensus 309 ~~g~~~~~~P~~~l~~~~~~~i~~~a~~~~~~~~~a~g~~~~G~~~vdf~~~~-------~g~~~~viEiN~R~G~~~~~ 381 (519)
++|+...-+... ++++..+... ++.+++|+.+.| ||++.++ +++.+++||||++||...+
T Consensus 661 s~Gg~~~d~td~-i~p~~~~~a~--------~aa~~igl~~~G---vDli~~di~~~~~~~~~~~~iiEvN~~pg~~~h- 727 (750)
T 3ln6_A 661 STGGDSIDVTNT-MDPTYKQLAA--------EMAEAMGAWVCG---VDLIIPNATQAYSKDKKNATCIELNFNPLMYMH- 727 (750)
T ss_dssp TTTCEEEECTTT-SCHHHHHHHH--------HHHHHHTCSSCE---EEEEESCSSSCCCTTTTCCEEEEEESSCCCHHH-
T ss_pred cCCCceeecccc-CCHHHHHHHH--------HHHHHhCCCeEE---EEEEecCccccccccCCCeEEEEEcCCcchhhh-
Confidence 555544433323 5665444333 344778887656 9999875 2225899999999988544
Q ss_pred HHHHH--hCCCHHHHHHHHHh
Q 010065 382 VLMVR--LESDLAEVLLAACR 400 (519)
Q Consensus 382 ~~~~~--~G~d~~~~~i~~~~ 400 (519)
++|. .+.|..+.+++.+.
T Consensus 728 -~~p~~g~~~~v~~~ii~~lf 747 (750)
T 3ln6_A 728 -TYCQEGPGQSITPRILAKLF 747 (750)
T ss_dssp -HSCSBSCCCCCHHHHHHHHC
T ss_pred -cCcccCCCCcHHHHHHHHhC
Confidence 4443 48899999988764
No 63
>2q7d_A Inositol-tetrakisphosphate 1-kinase; inositol kinase, ITPK1, inositol 1,3,4-5/6 phosphate, inositol phosphate, inositolphosphate; HET: ANP; 1.60A {Homo sapiens} PDB: 2qb5_A* 2odt_X
Probab=99.82 E-value=4e-19 Score=179.04 Aligned_cols=221 Identities=11% Similarity=0.091 Sum_probs=148.4
Q ss_pred cCCcEEEEC--C---C--------hhhHHHHHHHHH-HCCCCeeCCcHHHHHHhcCHHHHHHHHHHc-------CCCCCC
Q 010065 146 WSVGLVVVG--P---E--------APLVSGLANKLV-KAGIPTFGPSSEAAALEGSKNFMKNLCDKY-------GIPTAK 204 (519)
Q Consensus 146 ~~id~Vi~g--~---E--------~~~~~~~a~~le-~~gip~~g~~~~~~~~~~dK~~~k~~l~~~-------Gi~~p~ 204 (519)
..+|+||+. + | ++.++.+.+... ..|++++ +++.++..+.||..|.++|.++ |||+|+
T Consensus 62 ~~~Dvvi~~l~~~~~ea~~~d~~~~~~~~~l~~~~~~~~gv~vi-np~~ai~~~~dk~~~~~~L~k~~~~~~~~gIp~P~ 140 (346)
T 2q7d_A 62 GPLDVIIHKLTDVILEADQNDSQSLELVHRFQEYIDAHPETIVL-DPLPAIRTLLDRSKSYELIRKIEAYMEDDRICSPP 140 (346)
T ss_dssp CCCSEEEECCHHHHHHHHTTCHHHHHHHHHHHHHHHHCTTSEEE-SCHHHHHHTTBHHHHHHHHHHHHHHHCBTTEECCC
T ss_pred CCCCEEEeCCcccccccccCchhHHHHHHHHHHHHHHCCCeEEc-CCHHHHHHhhhHHHHHHHHHhhcccccCCCCCCCC
Confidence 368999983 1 2 244444444333 3489988 9999999999999999999997 999999
Q ss_pred eeecCCH--HHHHHHHH--HhCCCEEEEeCCCC--CCCcEEEeCCHHHHHHHHHHHHhhccCCCCCCcEEEEeccC--Cc
Q 010065 205 YKTFTDP--NAAKQYIQ--EEGAPIVVKADGLA--AGKGVIVAMTLEEAYEAVDSMLLKNAFGSAGCRVIIEEFLE--GE 276 (519)
Q Consensus 205 ~~~v~~~--~~~~~~~~--~~g~P~VvKP~~g~--gs~GV~~v~~~~el~~a~~~~~~~~~~~~~~~~~lvEe~I~--G~ 276 (519)
+..+.+. +++.+.++ .++||+|+||..|. .+.|+.++.+.++|.. .+..++|||||+ |+
T Consensus 141 t~~~~~~~~~~~~~~~~~~~lg~P~VvKP~~g~Gs~s~~v~~v~~~~~l~~-------------~~~~~lvQefI~~~G~ 207 (346)
T 2q7d_A 141 FMELTSLCGDDTMRLLEKNGLTFPFICKTRVAHGTNSHEMAIVFNQEGLNA-------------IQPPCVVQNFINHNAV 207 (346)
T ss_dssp EEEECSCCCTTHHHHHHHTTCCSSEEEECSBCSSTTCCEEEEECSGGGTTC---------------CCEEEEECCCCTTE
T ss_pred EEEEeCCCHHHHHHHHHhcCCCCCEEEEecCCCcceeeeeEEecCHHHHHh-------------cCCCEEEEEeeCCCCe
Confidence 9998763 45555443 57899999998653 3779999999888764 136799999997 79
Q ss_pred EEEEEEEEeCCeeEEecccc-c-------cccccCCCC-CCC-CCCceEEec-------CCCCCHHHHHHHHHHHHHHHH
Q 010065 277 EASFFALVDGENAIPLESAQ-D-------HKRVGDGDT-GPN-TGGMGAYSP-------APVLTKELQSVVMESIILPTV 339 (519)
Q Consensus 277 E~sv~~l~dg~~~~~~~~~~-~-------~~~~~~~~~-~~~-~g~~~~~~P-------~~~l~~~~~~~i~~~a~~~~~ 339 (519)
++.|.++ |+.+++..... . ...+++|+. +++ .|+..+.+| +. +++ .+++++.| .
T Consensus 208 dirv~Vv--G~~v~~~~r~sl~~~~~~~~~~~~~~f~s~~~~~~g~~~~~~~~~~~~~~~~-~~~--~~el~~lA----~ 278 (346)
T 2q7d_A 208 LYKVFVV--GESYTVVQRPSLKNFSAGTSDRESIFFNSHNVSKPESSSVLTELDKIEGVFE-RPS--DEVIRELS----R 278 (346)
T ss_dssp EEEEEEE--TTEEEEEEEECCCCCC----CCCCEEEEGGGTSSTTCCCGGGCCSCCCSCCC-CCC--HHHHHHHH----H
T ss_pred EEEEEEE--CCEEEEEEEecCCCcCcCccccccccccceeeccCCcccccccccccccccc-CCC--hHHHHHHH----H
Confidence 9999887 44444321100 0 112333333 333 233333334 22 332 23555555 4
Q ss_pred HHHHHcCCCeeeEEEEEEEEEc-CCCceEEEEEeCCCCCCchHHHHHHhCCCHHHHHHHHHhC
Q 010065 340 KGMSAEGCKFVGVLYAGLMIEK-KSGLPKLIEYNVRFGDPECQVLMVRLESDLAEVLLAACRG 401 (519)
Q Consensus 340 ~~~~a~g~~~~G~~~vdf~~~~-~g~~~~viEiN~R~G~~~~~~~~~~~G~d~~~~~i~~~~g 401 (519)
++.+++|+++. ++|+++++ +| .+||+|||+-||++... |+.+.+++.+..
T Consensus 279 ~a~~alGl~~~---gvDii~~~~~g-~~~VlEVN~~PG~~g~~--------~~~~~i~~~l~~ 329 (346)
T 2q7d_A 279 ALRQALGVSLF---GIDIIINNQTG-QHAVIDINAFPGYEGVS--------EFFTDLLNHIAT 329 (346)
T ss_dssp HHHHHHCCCEE---EEEEEECTTTC-CEEEEEEEESCCCTTCT--------THHHHHHHHHHH
T ss_pred HHHHHhCCceE---eeEEEeecCCC-CEEEEEEeCCccccccc--------hHHHHHHHHHHH
Confidence 57789998843 59999986 44 69999999999987652 455555555443
No 64
>1i7n_A Synapsin II; synapse, phosphorylation, neuropeptide; 1.90A {Rattus norvegicus} SCOP: c.30.1.5 d.142.1.3 PDB: 1i7l_A 1auv_A 1aux_A*
Probab=99.79 E-value=1.2e-17 Score=164.66 Aligned_cols=220 Identities=16% Similarity=0.133 Sum_probs=148.1
Q ss_pred CCcEEEEC--C----ChhhHHHHHHHHHHCCCCeeCCcHHHHHHhcCH----HHHHHHHHHcCC---CCCCeeecCCHHH
Q 010065 147 SVGLVVVG--P----EAPLVSGLANKLVKAGIPTFGPSSEAAALEGSK----NFMKNLCDKYGI---PTAKYKTFTDPNA 213 (519)
Q Consensus 147 ~id~Vi~g--~----E~~~~~~~a~~le~~gip~~g~~~~~~~~~~dK----~~~k~~l~~~Gi---~~p~~~~v~~~~~ 213 (519)
.+|+|++- . +......+...||..|+|++ ++++++..|.|| ..+.++++++|+ |.|+.....+..+
T Consensus 68 ~~D~vi~R~~~~~~~~~~~~r~vl~~le~~Gvpvi-N~~~sI~~~~DK~~~~~~~~~~l~~~gi~~~P~~~~~~~~~~~~ 146 (309)
T 1i7n_A 68 RPDFVLIRQHAFGMAENEDFRHLVIGMQYAGLPSI-NSLESIYNFCDKPWVFAQMVAIFKTLGGEKFPLIEQTYYPNHRE 146 (309)
T ss_dssp CCSEEEECSCCCCSSTTCCCHHHHHHHHHTTCCEE-SCHHHHHHTSSHHHHHHHHHHHHHHHCTTTSCBCCCEEESSGGG
T ss_pred cCCEEEEecccccccccchHHHHHHHHHHCCcccc-CCHHHHHHhCCccHHHHHHHHHHHhCCCCCCCCCCEEeeCChhh
Confidence 68999982 1 21122345667999999999 999999999999 667788889998 8555444444433
Q ss_pred HHHHHHHhCCCEEEEeCCCCCCCcEEEeCCHHHHHHHHHHHHhhccCCCCCCcEEEEeccCC-cEEEEEEEEeCCeeEEe
Q 010065 214 AKQYIQEEGAPIVVKADGLAAGKGVIVAMTLEEAYEAVDSMLLKNAFGSAGCRVIIEEFLEG-EEASFFALVDGENAIPL 292 (519)
Q Consensus 214 ~~~~~~~~g~P~VvKP~~g~gs~GV~~v~~~~el~~a~~~~~~~~~~~~~~~~~lvEe~I~G-~E~sv~~l~dg~~~~~~ 292 (519)
+++.+|||+|+||..|+.|+||.++++.+++.+.++.... ....+++||||+. +++.+.++ |+.+..+
T Consensus 147 ---~~~~~g~PvVvK~~~Gs~G~GV~lv~~~~~~~~~~~~~~~------~~~~~~vQefI~~g~DiRv~Vv--Gg~v~a~ 215 (309)
T 1i7n_A 147 ---MLTLPTFPVVVKIGHAHSGMGKVKVENHYDFQDIASVVAL------TQTYATAEPFIDAKYDIRVQKI--GNNYKAY 215 (309)
T ss_dssp ---GSSCCCSSEEEEESSCSTTTTEEEECSHHHHHHHHHHHHH------HTCCEEEEECCCEEEEEEEEEE--TTEEEEE
T ss_pred ---hhhccCCCEEEEeCCCCceeCeEEECCHHHHHHHHHHHhc------cCCeEEEEeecCCCceEEEEEE--CCEEEEE
Confidence 3456799999999999999999999999999988875543 2367889999994 56666555 4444432
Q ss_pred ccccccccccCCCCCCCCCCceEEecCCCCCHHHHHHHHHHHHHHHHHHHHHc-CCCeeeEEEEEEEEEcCCCceEEEEE
Q 010065 293 ESAQDHKRVGDGDTGPNTGGMGAYSPAPVLTKELQSVVMESIILPTVKGMSAE-GCKFVGVLYAGLMIEKKSGLPKLIEY 371 (519)
Q Consensus 293 ~~~~~~~~~~~~~~~~~~g~~~~~~P~~~l~~~~~~~i~~~a~~~~~~~~~a~-g~~~~G~~~vdf~~~~~g~~~~viEi 371 (519)
.+... --++.+ +.+ .+...+.+ ++++..+.+. ++.+++ |+++ +.||++.+++| .++++|+
T Consensus 216 --~Rr~~-~g~wrt--N~~-~~~~e~~~-l~~e~~~la~--------~A~~a~gGldi---~GVDll~~~~g-~~~V~EV 276 (309)
T 1i7n_A 216 --MRTSI-SGNWKT--NTG-SAMLEQIA-MSDRYKLWVD--------ACSEMFGGLDI---CAVKAVHGKDG-KDYIFEV 276 (309)
T ss_dssp --EEESS-CTTTSC--SCC-CSSEEEEC-CCHHHHHHHH--------HHTTGGGCCSE---EEEEEEEETTS-CEEEEEE
T ss_pred --EEEcC-CCCCee--cCC-cceeeecC-CCHHHHHHHH--------HHHHHhCCCCE---EEEEEEEcCCC-CEEEEEE
Confidence 22110 011122 222 23333444 6666443333 334677 6654 55999999887 6899999
Q ss_pred eC--CCCCCchHHHHHHhCCCHHHHHHHHHh
Q 010065 372 NV--RFGDPECQVLMVRLESDLAEVLLAACR 400 (519)
Q Consensus 372 N~--R~G~~~~~~~~~~~G~d~~~~~i~~~~ 400 (519)
|. .||...+. ...+.++.+++++.+.
T Consensus 277 N~~~~P~~~~~~---~~~~~~ia~~ii~~~~ 304 (309)
T 1i7n_A 277 MDCSMPLIGEHQ---VEDRQLITDLVISKMN 304 (309)
T ss_dssp ECTTCCCCSSCH---HHHHHHHHHHHHHHHH
T ss_pred CCCCCCCccchh---hhhHHHHHHHHHHHHH
Confidence 99 99764432 2246677777776553
No 65
>2p0a_A Synapsin-3, synapsin III; neurotransmitter release, schizophrenia, vesicle T structural genomics, structural genomics consortium, SGC, neuropeptide; HET: ANP; 1.90A {Homo sapiens}
Probab=99.78 E-value=3e-17 Score=163.56 Aligned_cols=222 Identities=17% Similarity=0.133 Sum_probs=152.6
Q ss_pred CCcEEEECCCh------hhHHHHHHHHHHCCCCeeCCcHHHHHHhcCH----HHHHHHHHHcCC---CCCCeeecCCHHH
Q 010065 147 SVGLVVVGPEA------PLVSGLANKLVKAGIPTFGPSSEAAALEGSK----NFMKNLCDKYGI---PTAKYKTFTDPNA 213 (519)
Q Consensus 147 ~id~Vi~g~E~------~~~~~~a~~le~~gip~~g~~~~~~~~~~dK----~~~k~~l~~~Gi---~~p~~~~v~~~~~ 213 (519)
.+|+|++-... .....+...||..|+|++ ++++++..|.|| ..+.++++++|+ |.++.....+..+
T Consensus 85 ~~D~vi~R~~~~~~~~~~~yr~vl~~le~~Gvpvi-N~~~sI~~~~DK~~v~~~~l~~l~~~gi~~~P~~~~t~~~~~~~ 163 (344)
T 2p0a_A 85 KPDFILVRQHAYSMALGEDYRSLVIGLQYGGLPAV-NSLYSVYNFCSKPWVFSQLIKIFHSLGPEKFPLVEQTFFPNHKP 163 (344)
T ss_dssp CCSEEEECSCSEEGGGTEECHHHHHHHHHTTCCEE-SCHHHHHHTTCHHHHHHHHHHHHHHHCTTTSCBCCCEEESSSTT
T ss_pred CCCEEEEeccccccccchhHHHHHHHHHHCCceec-CCHHHHHhhCCchHHHHHHHHHHHHCCCCCCCCCCEEecCchhh
Confidence 68999993111 112345667999999999 999999999999 667788899998 8555444444333
Q ss_pred HHHHHHHhCCCEEEEeCCCCCCCcEEEeCCHHHHHHHHHHHHhhccCCCCCCcEEEEeccCC-cEEEEEEEEeCCeeEEe
Q 010065 214 AKQYIQEEGAPIVVKADGLAAGKGVIVAMTLEEAYEAVDSMLLKNAFGSAGCRVIIEEFLEG-EEASFFALVDGENAIPL 292 (519)
Q Consensus 214 ~~~~~~~~g~P~VvKP~~g~gs~GV~~v~~~~el~~a~~~~~~~~~~~~~~~~~lvEe~I~G-~E~sv~~l~dg~~~~~~ 292 (519)
+++.+|||+|+||..|+.|+||.++++.+++...++.+.. ....+++||||+. +++.|.++ |+.+..+
T Consensus 164 ---~~~~~g~PvVvK~~~Gs~G~GV~lve~~~~~~~~~~~~~~------~~~~~~vQefI~~g~DiRv~VV--Gg~vva~ 232 (344)
T 2p0a_A 164 ---MVTAPHFPVVVKLGHAHAGMGKIKVENQLDFQDITSVVAM------AKTYATTEAFIDSKYDIRIQKI--GSNYKAY 232 (344)
T ss_dssp ---CCCCSSSSEEEEESSCCTTTTEEEECSHHHHHHHHHHHHH------HTCCEEEEECCCEEEEEEEEEE--TTEEEEE
T ss_pred ---hhhccCCCEEEEeCCCCceeCeEEECCHHHHHHHHHHHhc------cCCeEEEEeccCCCccEEEEEE--CCEEEEE
Confidence 3446799999999999999999999999999988765442 2367889999994 55666555 4444432
Q ss_pred ccccccccccCCCCCCCCCCceEEecCCCCCHHHHHHHHHHHHHHHHHHHHHc-CCCeeeEEEEEEEEEcCCCceEEEEE
Q 010065 293 ESAQDHKRVGDGDTGPNTGGMGAYSPAPVLTKELQSVVMESIILPTVKGMSAE-GCKFVGVLYAGLMIEKKSGLPKLIEY 371 (519)
Q Consensus 293 ~~~~~~~~~~~~~~~~~~g~~~~~~P~~~l~~~~~~~i~~~a~~~~~~~~~a~-g~~~~G~~~vdf~~~~~g~~~~viEi 371 (519)
.+... ..+.+.+.+ .+...+.+ ++++..+.+.+ +.+++ |+++ +.||++.+++| .++|+|+
T Consensus 233 --~R~~~---~g~wrtN~~-~~~~e~~~-l~~e~~~la~~--------Aa~a~gGldi---~GVDll~~~~G-~~~VlEV 293 (344)
T 2p0a_A 233 --MRTSI---SGNWKANTG-SAMLEQVA-MTERYRLWVDS--------CSEMFGGLDI---CAVKAVHSKDG-RDYIIEV 293 (344)
T ss_dssp --EEEES---SSCSSTTSS-SEEEEEEC-CCHHHHHHHHH--------HTTGGGCCSE---EEEEEEEETTS-CEEEEEE
T ss_pred --EEecC---CCCCeecCC-ceEEEeeC-CCHHHHHHHHH--------HHHHhCCCCE---EEEEEEEcCCC-CEEEEEE
Confidence 22110 111122233 34444555 67764443333 33677 6655 55999999887 6799999
Q ss_pred eC--CCCCCchHHHHHHhCCCHHHHHHHHHhCC
Q 010065 372 NV--RFGDPECQVLMVRLESDLAEVLLAACRGE 402 (519)
Q Consensus 372 N~--R~G~~~~~~~~~~~G~d~~~~~i~~~~g~ 402 (519)
|. .|+...+ ....+.++.+.+++.+...
T Consensus 294 N~~~~P~~~~~---~~~~~~~Ia~~ii~~i~~~ 323 (344)
T 2p0a_A 294 MDSSMPLIGEH---VEEDRQLMADLVVSKMSQL 323 (344)
T ss_dssp ECTTCCCCGGG---HHHHHHHHHHHHHHHHHTC
T ss_pred cCCCCCcccch---hhhHHHHHHHHHHHHHHHh
Confidence 99 8876433 2346779999999888665
No 66
>1pk8_A RAT synapsin I; ATP binding, ATP grAsp, calcium (II) ION, membrane protein; HET: ATP; 2.10A {Rattus norvegicus} SCOP: c.30.1.5 d.142.1.3 PDB: 1px2_A*
Probab=99.78 E-value=3.2e-17 Score=166.05 Aligned_cols=222 Identities=16% Similarity=0.124 Sum_probs=151.4
Q ss_pred CCcEEEEC----C--ChhhHHHHHHHHHHCCCCeeCCcHHHHHHhcCH----HHHHHHHHHcCC---CCCCeeecCCHHH
Q 010065 147 SVGLVVVG----P--EAPLVSGLANKLVKAGIPTFGPSSEAAALEGSK----NFMKNLCDKYGI---PTAKYKTFTDPNA 213 (519)
Q Consensus 147 ~id~Vi~g----~--E~~~~~~~a~~le~~gip~~g~~~~~~~~~~dK----~~~k~~l~~~Gi---~~p~~~~v~~~~~ 213 (519)
.+|+||+- . +......+...||..|+|++ ++++++..|.|| ..+.++++++|+ |.++.....+..+
T Consensus 180 ~~DaviiR~~~~~~~~~~~yr~vlr~lE~~Gvpvi-Ns~~sI~~~~DK~~vf~~~l~ll~~~gi~~iP~t~~t~~~~~~~ 258 (422)
T 1pk8_A 180 KPDFVLIRQHAFSMARNGDYRSLVIGLQYAGIPSV-NSLHSVYNFCDKPWVFAQMVRLHKKLGTEEFPLIDQTFYPNHKE 258 (422)
T ss_dssp CCSEEEECSCSBCSSTTCBCHHHHHHHHHTTCCEE-SCHHHHHHTSSHHHHHHHHHHHHHHHCTTTSCBCCCEEESSGGG
T ss_pred CCCEEEEeccccccccchhHHHHHHHHHHCCcccc-CCHHHHHHhCCccHHHHHHHHHHHhCCCCCCCCCceEecCchhh
Confidence 68999982 1 21222355677999999999 999999999999 567778889998 7545444444333
Q ss_pred HHHHHHHhCCCEEEEeCCCCCCCcEEEeCCHHHHHHHHHHHHhhccCCCCCCcEEEEeccCC-cEEEEEEEEeCCeeEEe
Q 010065 214 AKQYIQEEGAPIVVKADGLAAGKGVIVAMTLEEAYEAVDSMLLKNAFGSAGCRVIIEEFLEG-EEASFFALVDGENAIPL 292 (519)
Q Consensus 214 ~~~~~~~~g~P~VvKP~~g~gs~GV~~v~~~~el~~a~~~~~~~~~~~~~~~~~lvEe~I~G-~E~sv~~l~dg~~~~~~ 292 (519)
+++..|||+|+||..|+.|+||.++++.+++...++.... ....+++||||+. +++.|.++ |+.+..+
T Consensus 259 ---~i~~~g~PvVvKp~~GS~G~GV~lve~~~~l~~ii~~~~~------~~~~~~vQEfI~~g~DIRv~VV--Gg~vva~ 327 (422)
T 1pk8_A 259 ---MLSSTTYPVVVKMGHAHSGMGKVKVDNQHDFQDIASVVAL------TKTYATAEPFIDAKYDVRVQKI--GQNYKAY 327 (422)
T ss_dssp ---CCCCSSSSEEEEESSCCTTTTEEEECSHHHHHHHHHHHHH------HTSCEEEEECCCEEEEEEEEEE--TTEEEEE
T ss_pred ---hhhccCCCEEEEeCCCCceeCeEEeCCHHHHHHHHHHHhc------cCceEEEEeecCCCceEEEEEE--CCEEEEE
Confidence 3356789999999999999999999999999988876543 2367889999994 56666555 4444432
Q ss_pred ccccccccccCCCCCCCCCCceEEecCCCCCHHHHHHHHHHHHHHHHHHHHHc-CCCeeeEEEEEEEEEcCCCceEEEEE
Q 010065 293 ESAQDHKRVGDGDTGPNTGGMGAYSPAPVLTKELQSVVMESIILPTVKGMSAE-GCKFVGVLYAGLMIEKKSGLPKLIEY 371 (519)
Q Consensus 293 ~~~~~~~~~~~~~~~~~~g~~~~~~P~~~l~~~~~~~i~~~a~~~~~~~~~a~-g~~~~G~~~vdf~~~~~g~~~~viEi 371 (519)
........ +. .+.+ .+...+.+ ++++..+.+.+ +.+++ |+++ +.||++.+++| .++|+|+
T Consensus 328 ~Rr~~~g~---Wr--tNvg-~g~~e~i~-lt~e~~elA~k--------Aaka~gGldi---aGVDlL~s~dG-~~~VlEV 388 (422)
T 1pk8_A 328 MRTSVSGN---WK--TNTG-SAMLEQIA-MSDRYKLWVDT--------CSEIFGGLDI---CAVEALHGKDG-RDHIIEV 388 (422)
T ss_dssp EEEESSSC---SS--TTSS-CEEEEEEC-CCHHHHHHHHH--------HTTGGGCCSE---EEEEEEEETTS-CEEEEEE
T ss_pred EEEcCCCC---ce--eccC-ceeeeeeC-CCHHHHHHHHH--------HHHHhCCCCE---EEEEEEEcCCC-CEEEEEE
Confidence 21111111 12 2233 24444555 67764443333 34677 6655 55999999887 6899999
Q ss_pred eC--CCCCCchHHHHHHhCCCHHHHHHHHHhCC
Q 010065 372 NV--RFGDPECQVLMVRLESDLAEVLLAACRGE 402 (519)
Q Consensus 372 N~--R~G~~~~~~~~~~~G~d~~~~~i~~~~g~ 402 (519)
|. .|+...+. ...+.++.+++++.+.-.
T Consensus 389 N~s~~P~~~g~~---~~~~~~IA~~ii~~i~~~ 418 (422)
T 1pk8_A 389 VGSSMPLIGDHQ---DEDKQLIVELVVNKMTQA 418 (422)
T ss_dssp ECTTCCCCTTCH---HHHHHHHHHHHHHHHHCC
T ss_pred CCCCCCCccchh---hhHHHHHHHHHHHHHHHh
Confidence 99 88664332 235778888888877554
No 67
>1wr2_A Hypothetical protein PH1789; structural genomics, NPPSFA, national on protein structural and functional analyses; 2.00A {Pyrococcus horikoshii}
Probab=99.70 E-value=3e-17 Score=157.33 Aligned_cols=175 Identities=18% Similarity=0.171 Sum_probs=126.2
Q ss_pred hcCHHHHHHHHHHcCCCCCCeeecCCHHHHHHHHHHhCCCEEEEeCCC-----CCCCcEEE-eCCHHHHHHHHHHHHhhc
Q 010065 185 EGSKNFMKNLCDKYGIPTAKYKTFTDPNAAKQYIQEEGAPIVVKADGL-----AAGKGVIV-AMTLEEAYEAVDSMLLKN 258 (519)
Q Consensus 185 ~~dK~~~k~~l~~~Gi~~p~~~~v~~~~~~~~~~~~~g~P~VvKP~~g-----~gs~GV~~-v~~~~el~~a~~~~~~~~ 258 (519)
.+||..+|++|+++|||+|++..+++.+++.++++++|||+|+||..+ +++.||.+ ++|.+|+.++++.++...
T Consensus 19 ~l~k~~~k~ll~~~GIp~p~~~~~~~~~ea~~~a~~lg~PvvvKp~~~~~~~r~~~gGv~~~v~~~~el~~a~~~~~~~~ 98 (238)
T 1wr2_A 19 AMVEYEAKQVLKAYGLPVPEEKLAKTLDEALEYAKEIGYPVVLKLMSPQILHKSDAKVVMLNIKNEEELKKKWEEIHENA 98 (238)
T ss_dssp EECHHHHHHHHHTTTCCCCCCEEESSHHHHHHHHHHHCSSEEEEEECTTCCCHHHHTCEEEEECSHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHcCcCCCCeEEeCCHHHHHHHHHHhCCCEEEEEccCCCCcCCccCCEEEeCCCHHHHHHHHHHHHHhh
Confidence 579999999999999999999999999999888899999999999998 77889999 799999999999887531
Q ss_pred c--C-CCCCCcEEEEeccC-CcEEEEEEEEeCC--eeEEeccccccccccCCCCCCCCCCceEEecCCCCCHHHHHHHHH
Q 010065 259 A--F-GSAGCRVIIEEFLE-GEEASFFALVDGE--NAIPLESAQDHKRVGDGDTGPNTGGMGAYSPAPVLTKELQSVVME 332 (519)
Q Consensus 259 ~--~-~~~~~~~lvEe~I~-G~E~sv~~l~dg~--~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~P~~~l~~~~~~~i~~ 332 (519)
. + +.....++||+|++ |+|+.+.++.|.. .++.++.....-..+ .......| + ++++..+++.+
T Consensus 99 ~~~~~~~~~~~vlVEe~i~~g~E~~v~v~~d~~~g~v~~~~~Gg~~iE~~--------~d~~~~~~-P-l~~~~~~~~~~ 168 (238)
T 1wr2_A 99 KKYRPDAEILGVLVAPMLKPGREVIIGVTEDPQFGHAIMFGLGGIFVEIL--------KDVTFRLV-P-ITEKDARKMIQ 168 (238)
T ss_dssp HHHCTTCCCCEEEEEECCCCCEEEEEEEEEETTTEEEEEEEECSTTHHHH--------CCCEEEES-S-CCHHHHHHHHH
T ss_pred hhhCCCCccceEEEEECCCCCeEEEEEEEeCCCCCcEEEEecCCceeeee--------cceeeecC-C-CCHHHHHHHHH
Confidence 1 1 11236899999999 6999999998863 333332110000001 11122222 3 88888888877
Q ss_pred HHHHHHHHHHHHcCCCeeeEEEEEEE------------EEcCCCceEEEEEeCCC
Q 010065 333 SIILPTVKGMSAEGCKFVGVLYAGLM------------IEKKSGLPKLIEYNVRF 375 (519)
Q Consensus 333 ~a~~~~~~~~~a~g~~~~G~~~vdf~------------~~~~g~~~~viEiN~R~ 375 (519)
.+. ++..++|++ |..++|+- +.+..++++++||||++
T Consensus 169 ~~~----~~~~~~g~~--G~~~~d~~~l~~~l~~l~~~~~~~~~~~~~lEINPl~ 217 (238)
T 1wr2_A 169 EIK----AYPILAGAR--GEEPADIDAIVDMLLKVSKLVDDLKDYIKEMDLNPVF 217 (238)
T ss_dssp TST----THHHHHCC----CCCBCHHHHHHHHHHHHHHHHHTTTTEEEEEEEEEE
T ss_pred HHH----HHHHhcCCC--CCChhhHHHHHHHHHHHHHHHHcCCCCeEEEeccCeE
Confidence 653 466788877 87666631 22333139999999997
No 68
>2cqy_A Propionyl-COA carboxylase alpha chain, mitochondrial; PCCA, B domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.65 E-value=7.8e-18 Score=140.62 Aligned_cols=100 Identities=25% Similarity=0.279 Sum_probs=86.7
Q ss_pred HHHhcCHHHHHHHHHHcCCCCCCee--ecCCHHHHHHHHHHhCCCEEEEeCCCCCCCcEEEeCCHHHHHHHHHHHHhh--
Q 010065 182 AALEGSKNFMKNLCDKYGIPTAKYK--TFTDPNAAKQYIQEEGAPIVVKADGLAAGKGVIVAMTLEEAYEAVDSMLLK-- 257 (519)
Q Consensus 182 ~~~~~dK~~~k~~l~~~Gi~~p~~~--~v~~~~~~~~~~~~~g~P~VvKP~~g~gs~GV~~v~~~~el~~a~~~~~~~-- 257 (519)
+.+++||..++++|+++|||+|++. .+.+.+++.++++.++||+|+||..+++|.||.+++|.+|+.++++.++..
T Consensus 3 ~~~~~dK~~~~~~l~~~gip~p~~~~~~~~~~~~~~~~~~~~~~P~vvKp~~~~~~~gv~~v~~~~el~~~~~~~~~~~~ 82 (108)
T 2cqy_A 3 SGSSGDKIESKLLAKKAEVNTIPGFDGVVKDAEEAVRIAREIGYPVMIKASAGGGGKGMRIAWDDEETRDGFRLSSQEAA 82 (108)
T ss_dssp CCCCCCCCCSTTCCCSSCCCCCSCCCSCBSSHHHHHHHHHHHCSSEEEEETTSCCTTTCEEESSHHHHHHHHHHHHHHHH
T ss_pred hhhhcCHHHHHHHHHHcCCCCCCCcccccCCHHHHHHHHHhcCCCEEEEECCCCCCccEEEeCCHHHHHHHHHHHHHHHH
Confidence 4568999999999999999999998 888999998888899999999999999999999999999999999877531
Q ss_pred ccCCCCCCcEEEEeccCCc-EEEEEEE
Q 010065 258 NAFGSAGCRVIIEEFLEGE-EASFFAL 283 (519)
Q Consensus 258 ~~~~~~~~~~lvEe~I~G~-E~sv~~l 283 (519)
..+ .+..+|||+||+|. |++|.++
T Consensus 83 ~~~--~~~~~lvee~i~g~~E~~v~v~ 107 (108)
T 2cqy_A 83 SSF--GDDRLLIEKFIDNPRHISGPSS 107 (108)
T ss_dssp HHT--SSCCEEEEECCSSSSCCCSCCC
T ss_pred hhc--CCCcEEEeeccCCCcEEEEEec
Confidence 111 14689999999995 9988654
No 69
>3t7a_A Inositol pyrophosphate kinase; ATP-grAsp fold, transferase; HET: ADP; 1.70A {Homo sapiens} PDB: 3t9a_A* 3t9b_A* 3t9c_A* 3t9d_A* 3t9e_A* 3t9f_A* 4gb4_A* 4hn2_A* 3t54_A* 3t99_A*
Probab=99.57 E-value=2.6e-15 Score=143.85 Aligned_cols=202 Identities=13% Similarity=0.059 Sum_probs=130.3
Q ss_pred CcEEEECCChhh-HHHHHHHHHHCCCCeeCCcHHHHHHhcCHHHHHHHHHHcCCCCCCeeecCCHH------------HH
Q 010065 148 VGLVVVGPEAPL-VSGLANKLVKAGIPTFGPSSEAAALEGSKNFMKNLCDKYGIPTAKYKTFTDPN------------AA 214 (519)
Q Consensus 148 id~Vi~g~E~~~-~~~~a~~le~~gip~~g~~~~~~~~~~dK~~~k~~l~~~Gi~~p~~~~v~~~~------------~~ 214 (519)
+|++++.--+++ +..+.+.++..+..++ ++..+..++.||..+.++|+++|||+|++..+.... +.
T Consensus 58 ~d~lisf~s~gfpl~kai~y~~lr~p~~I-Nd~~~q~~~~DK~~~~~iL~~~gIPtP~t~~~~rd~~~~~~~~~~e~~d~ 136 (330)
T 3t7a_A 58 CDCLISFHSKGFPLDKAVAYAKLRNPFVI-NDLNMQYLIQDRREVYSILQAEGILLPRYAILNRDPNNPKECNLIEGEDH 136 (330)
T ss_dssp CSEEEECCCTTCCHHHHHHHHHHHCCEES-BCSTHHHHHTBHHHHHHHHHHTTCCCCCEEEECCBTTBGGGSSEEECSSE
T ss_pred CCEEEEeccCCCcHHHHHHHHHHhCCcee-CCHHHHHHHHHHHHHHHHHHHcCCCCCCEEEEeCCCCCccccceeccchh
Confidence 789999533333 4456677888786665 999999999999999999999999999999987521 11
Q ss_pred HH-HHHHhCCCEEEEeCCCC-----------CCCcE----EEeCCHHHHHHHHHHHHhhccCCCCCCcEEEEeccC--Cc
Q 010065 215 KQ-YIQEEGAPIVVKADGLA-----------AGKGV----IVAMTLEEAYEAVDSMLLKNAFGSAGCRVIIEEFLE--GE 276 (519)
Q Consensus 215 ~~-~~~~~g~P~VvKP~~g~-----------gs~GV----~~v~~~~el~~a~~~~~~~~~~~~~~~~~lvEe~I~--G~ 276 (519)
.+ ..+.+++|+|+||..|. .|.|+ .++.|.+.....-... ..+..+|+||||+ |+
T Consensus 137 i~~~g~~l~kPfVeKPv~Gsdhni~iyyp~s~GgG~~RLfrki~n~sS~~~~~~~v-------r~~~~~i~QEFI~~~G~ 209 (330)
T 3t7a_A 137 VEVNGEVFQKPFVEKPVSAEDHNVYIYYPTSAGGGSQRLFRKIGSRSSVYSPESNV-------RKTGSYIYEEFMPTDGT 209 (330)
T ss_dssp EEETTEEEESSEEEEESBTTCCCCEEECCGGGTCCEEEEEEEETTEEEEEESCCSC-------CSSSCEEEEECCCCSSE
T ss_pred hhhccccccCCeeEcccccccCcceeecccccCCchhhhhhhhCCcccccChhhhh-------ccCCcEEEEeccCCCCc
Confidence 11 12346799999999885 23333 4455433210000001 2467899999997 78
Q ss_pred EEEEEEEEeCCeeEEeccccccc-cccCCCCCCCCCCceEEecCCCCCHHHHHHHHHHHHHHHHHHHHHcCCCeeeEEEE
Q 010065 277 EASFFALVDGENAIPLESAQDHK-RVGDGDTGPNTGGMGAYSPAPVLTKELQSVVMESIILPTVKGMSAEGCKFVGVLYA 355 (519)
Q Consensus 277 E~sv~~l~dg~~~~~~~~~~~~~-~~~~~~~~~~~g~~~~~~P~~~l~~~~~~~i~~~a~~~~~~~~~a~g~~~~G~~~v 355 (519)
++.|.++ |+.+.+.. .+... .-.++....+.|+.. .|.. |+++..+... ++.+++|+.+ +.|
T Consensus 210 DIRv~vV--G~~vv~Am-~R~sp~~~G~~r~N~~gG~~~--~~v~-Lt~eek~iA~--------kaa~a~G~~v---~GV 272 (330)
T 3t7a_A 210 DVKVYTV--GPDYAHAE-ARKSPALDGKVERDSEGKEVR--YPVI-LNAREKLIAW--------KVCLAFKQTV---CGF 272 (330)
T ss_dssp EEEEEEE--STTCEEEE-EEECTTSSCBCCBCTTSCBCC--EECC-CCHHHHHHHH--------HHHHHTTBSE---EEE
T ss_pred eEEEEEE--CCEEEEEE-EEeCCCCCCcEEEcCCCCcee--eeec-CCHHHHHHHH--------HHHHHhCCce---EEE
Confidence 8888776 43343322 22111 011233344434332 3555 7886544333 3447888765 449
Q ss_pred EEEEEcCCCceEEEEEeCCCC
Q 010065 356 GLMIEKKSGLPKLIEYNVRFG 376 (519)
Q Consensus 356 df~~~~~g~~~~viEiN~R~G 376 (519)
|++.++++ +||+|+|.++-
T Consensus 273 DlLrs~~~--~~V~EVNg~~f 291 (330)
T 3t7a_A 273 DLLRANGQ--SYVCDVNGFSF 291 (330)
T ss_dssp EEEEETTE--EEEEEEEESCC
T ss_pred EEEEECCc--cEEEEeCCCcc
Confidence 99999876 99999999983
No 70
>2fp4_B Succinyl-COA ligase [GDP-forming] beta-chain, mitochondrial; active site phosphohistidine residue; HET: NEP GTP; 2.08A {Sus scrofa} SCOP: c.23.4.1 d.142.1.4 PDB: 2fpg_B* 2fpi_B* 2fpp_B* 1euc_B* 1eud_B*
Probab=99.29 E-value=1.6e-12 Score=132.61 Aligned_cols=101 Identities=23% Similarity=0.247 Sum_probs=84.0
Q ss_pred CHHHHHHHHHHcCCCCCCeeecCCHHHHHHHHHHhCC-CEEEEeC--CCCCC---------CcEEEeCCHHHHHHHHHHH
Q 010065 187 SKNFMKNLCDKYGIPTAKYKTFTDPNAAKQYIQEEGA-PIVVKAD--GLAAG---------KGVIVAMTLEEAYEAVDSM 254 (519)
Q Consensus 187 dK~~~k~~l~~~Gi~~p~~~~v~~~~~~~~~~~~~g~-P~VvKP~--~g~gs---------~GV~~v~~~~el~~a~~~~ 254 (519)
+++.+|++|+++|||+|++..+.+.+++.++++++|| |+|+||. .|+.+ -||.+++|.+|+.++++++
T Consensus 4 ~E~~aK~lL~~~GIpvp~~~~~~s~~ea~~~a~~lg~~PvVvK~~i~~GGrGKg~~ks~~~GGV~l~~s~~e~~~a~~~~ 83 (395)
T 2fp4_B 4 QEYQSKKLMSDNGVKVQRFFVADTANEALEAAKRLNAKEIVLKAQILAGGRGKGVFSSGLKGGVHLTKDPEVVGQLAKQM 83 (395)
T ss_dssp CHHHHHHHHHHTTCCCCCEEEESSHHHHHHHHHHHTCSSEEEEECCSSSCGGGCEETTSCBCSEEEESCHHHHHHHHHTT
T ss_pred CHHHHHHHHHHCCcCCCCeEEECCHHHHHHHHHHcCCCcEEEEEeeccCCCccCccccCCcCCEEEECCHHHHHHHHHHH
Confidence 6789999999999999999999999999999999999 8999995 44433 3499999999999999988
Q ss_pred Hhhc----cC---CCCCCcEEEEeccC-CcEEEEEEEEeCC
Q 010065 255 LLKN----AF---GSAGCRVIIEEFLE-GEEASFFALVDGE 287 (519)
Q Consensus 255 ~~~~----~~---~~~~~~~lvEe~I~-G~E~sv~~l~dg~ 287 (519)
+... .. +.....++||+|++ |+|+.+.++.|..
T Consensus 84 l~~~~~t~q~g~~g~~~~~vlVEe~v~~~~E~~v~i~~D~~ 124 (395)
T 2fp4_B 84 IGYNLATKQTPKEGVKVNKVMVAEALDISRETYLAILMDRS 124 (395)
T ss_dssp TTSEEECTTSCTTCEECCCEEEEECCCCSEEEEEEEEEETT
T ss_pred hhcchhhhccCCCCCccceEEEEEccCCceeEEEEEEEccc
Confidence 6431 01 11124799999999 6999999999864
No 71
>2nu8_B SCS-beta, succinyl-COA synthetase beta chain; citric acid cycle, heterotetramer, ligase, ATP-grAsp fold, R fold; HET: COA; 2.15A {Escherichia coli} SCOP: c.23.4.1 d.142.1.4 PDB: 1scu_B* 2nu6_B* 1jkj_B* 2nu7_B* 2nu9_B* 2nua_B* 2scu_B* 1jll_B* 1cqj_B* 1cqi_B*
Probab=99.18 E-value=2e-10 Score=117.05 Aligned_cols=102 Identities=25% Similarity=0.272 Sum_probs=86.1
Q ss_pred cCHHHHHHHHHHcCCCCCCeeecCCHHHHHHHHHHhCCC-EEEEeCCCCC----CCcEEEeCCHHHHHHHHHHHHhhcc-
Q 010065 186 GSKNFMKNLCDKYGIPTAKYKTFTDPNAAKQYIQEEGAP-IVVKADGLAA----GKGVIVAMTLEEAYEAVDSMLLKNA- 259 (519)
Q Consensus 186 ~dK~~~k~~l~~~Gi~~p~~~~v~~~~~~~~~~~~~g~P-~VvKP~~g~g----s~GV~~v~~~~el~~a~~~~~~~~~- 259 (519)
.+++.+|++|+++|||+|++..+++.+++.++++++||| +|+||....+ +.||.+++|.+|+.+++++++....
T Consensus 3 l~E~~aK~lL~~~GIpvp~~~~~~s~eea~~aa~~lG~P~vVvK~~~~~ggrg~~gGV~l~~s~eel~~a~~~~~~~~~~ 82 (388)
T 2nu8_B 3 LHEYQAKQLFARYGLPAPVGYACTTPREAEEAASKIGAGPWVVKCQVHAGGRGKAGGVKVVNSKEDIRAFAENWLGKRLV 82 (388)
T ss_dssp CCHHHHHHHHHHTTCCCCCEEEESSHHHHHHHHHHHCSSCEEEEECCSSSCTTTTTCEEEECSHHHHHHHHHHHTTSEEC
T ss_pred CCHHHHHHHHHHCCcCCCCeeEECCHHHHHHHHHHhCCCeEEEEEecCCCCCCccCCEEEECCHHHHHHHHHHHhhhhhh
Confidence 378999999999999999999999999999999999999 9999987644 3499999999999999998864211
Q ss_pred ---C---CCCCCcEEEEeccC-CcEEEEEEEEeCC
Q 010065 260 ---F---GSAGCRVIIEEFLE-GEEASFFALVDGE 287 (519)
Q Consensus 260 ---~---~~~~~~~lvEe~I~-G~E~sv~~l~dg~ 287 (519)
. +.....++||+|++ |+|+++.+++|..
T Consensus 83 t~q~g~~g~~~~~vlVEe~v~~~~E~~v~v~~D~~ 117 (388)
T 2nu8_B 83 TYQTDANGQPVNQILVEAATDIAKELYLGAVVDRS 117 (388)
T ss_dssp CTTSCTTCEECCCEEEEECCCEEEEEEEEEEEETT
T ss_pred ccccCCCCcccceEEEEEccccCCcEEEEEEEecc
Confidence 1 11235799999999 6999999999764
No 72
>3ufx_B Succinyl-COA synthetase beta subunit; ATP-grAsp fold, ligase; HET: GDP; 2.35A {Thermus aquaticus}
Probab=99.16 E-value=2e-10 Score=117.18 Aligned_cols=101 Identities=29% Similarity=0.364 Sum_probs=85.3
Q ss_pred CHHHHHHHHHHcCCCCCCeeecCCHHHHHHHHHHhCCCEEEEeCCCCCC----CcEEEeCCHHHHHHHHHHHHhhccCCC
Q 010065 187 SKNFMKNLCDKYGIPTAKYKTFTDPNAAKQYIQEEGAPIVVKADGLAAG----KGVIVAMTLEEAYEAVDSMLLKNAFGS 262 (519)
Q Consensus 187 dK~~~k~~l~~~Gi~~p~~~~v~~~~~~~~~~~~~g~P~VvKP~~g~gs----~GV~~v~~~~el~~a~~~~~~~~~~~~ 262 (519)
+.+..|++|+++|||+|++..+++.+++.++++++|||+|+||....++ .||.+++|.+|+.+++++++.....+.
T Consensus 4 ~E~~aK~lL~~~GIpvp~~~~~~s~eea~~aa~~lG~PvVvKa~~~~ggkg~~GGV~l~~s~ee~~~a~~~~~~~~~~g~ 83 (397)
T 3ufx_B 4 HEYQAKEILARYGVPVPPGKVAYTPEEAKRIAEEFGKRVVIKAQVHVGGRGKAGGVKLADTPQEAYEKAQAILGMNIKGL 83 (397)
T ss_dssp CHHHHHHHHHHTTCCCCCEEEESSHHHHHHHHHHHTSCEEEEECCSSSCTTTTTCEEEESSHHHHHHHHHHHTTCEETTE
T ss_pred CHHHHHHHHHHCCCCCCCeEEECCHHHHHHHHHHcCCCEEEEEccccCCCCccceEEEeCCHHHHHHHHHHhhhhhccCC
Confidence 4678899999999999999999999999999999999999999874333 399999999999999999874321111
Q ss_pred CCCcEEEEeccC-CcEEEEEEEEeCC
Q 010065 263 AGCRVIIEEFLE-GEEASFFALVDGE 287 (519)
Q Consensus 263 ~~~~~lvEe~I~-G~E~sv~~l~dg~ 287 (519)
..+.++||+|++ |+|+.+.++.|..
T Consensus 84 ~~~~vlVEe~v~~g~El~vgv~~D~~ 109 (397)
T 3ufx_B 84 TVKKVLVAEAVDIAKEYYAGLILDRA 109 (397)
T ss_dssp ECCCEEEEECCCEEEEEEEEEEEETT
T ss_pred ccceEEEEEeecCCeeEEEEEEecCC
Confidence 246899999999 7999999998753
No 73
>3tig_A TTL protein; ATP-grAsp, ligase, tubulin; 2.50A {Silurana} PDB: 3tii_A* 3tin_A*
Probab=98.06 E-value=0.00012 Score=73.43 Aligned_cols=165 Identities=18% Similarity=0.191 Sum_probs=86.5
Q ss_pred CCCEEEEeCCCCCCCcEEEeCCHHHHHHHHHHHHhhccCCCCCCcEEEEeccC--------CcE--EEEEEEEeCC-eeE
Q 010065 222 GAPIVVKADGLAAGKGVIVAMTLEEAYEAVDSMLLKNAFGSAGCRVIIEEFLE--------GEE--ASFFALVDGE-NAI 290 (519)
Q Consensus 222 g~P~VvKP~~g~gs~GV~~v~~~~el~~a~~~~~~~~~~~~~~~~~lvEe~I~--------G~E--~sv~~l~dg~-~~~ 290 (519)
+.++|+||..++.|+|+.++++.+++.+.++.. ...++||+||+ |+- +.+-+++.+- .++
T Consensus 147 ~~~wI~KP~~~srG~GI~l~~~~~~i~~~~~~~---------~~~~VvQkYI~~PlLi~~~grKFDlR~Yvlvts~l~vy 217 (380)
T 3tig_A 147 GNVWIAKSSSGAKGEGILISSDATELLDFIDNQ---------GQVHVIQKYLESPLLLEPGHRKFDIRSWVLVDNQYNIY 217 (380)
T ss_dssp CCCEEEEESCC----CCBCCSCSHHHHHHHHHH---------TSCEEEEECCSSBCCBTTTTBCEEEEEEEEECTTCCEE
T ss_pred CCeEEEeCCccCCCCCEEEeCCHHHHHHHHhcc---------CCcEEEEecccCceeecCCCceeEEEEEEEEcCCCEEE
Confidence 578999999999999999999999988776542 36799999995 444 4444444331 111
Q ss_pred Eec------cccccc---------cccCCC------CCCC---CCCceE------Ee----cCCCCCHHHHHHHHHHHHH
Q 010065 291 PLE------SAQDHK---------RVGDGD------TGPN---TGGMGA------YS----PAPVLTKELQSVVMESIIL 336 (519)
Q Consensus 291 ~~~------~~~~~~---------~~~~~~------~~~~---~g~~~~------~~----P~~~l~~~~~~~i~~~a~~ 336 (519)
..- ....+. .+.++. ..|. .|.... +. ... ....+...|.+.+.+
T Consensus 218 ~y~~g~~Rfa~~~y~~~~~~~~~~HLTN~~iqk~~~~~y~~~~~g~~~~~~~f~~yL~~~~~~~-~~~~i~~~I~~ii~~ 296 (380)
T 3tig_A 218 LYREGVLRTSSEPYSDTNFQDMTSHLTNHCIQKEHSKNYGRYEEGNEMFFEEFNQYLVTSLNIN-LENSILCQIKEIIRV 296 (380)
T ss_dssp ECSCCEEEECC----------------------------------CCBCHHHHHHHHSTTSSCC-HHHHTHHHHHHHHHH
T ss_pred EEcCCEEEecCCCcCccchhhhhhhccccccccccccccccccCCCcCcHHHHHHHHHHhcCcc-HHHHHHHHHHHHHHH
Confidence 110 000000 001100 0000 000000 00 000 112344555555443
Q ss_pred HHHHHHHHcC-----CCeeeEEEEEEEEEcCCCceEEEEEeCCCCCCchHHHHHHhCCCHHHHHHHHHhCCC
Q 010065 337 PTVKGMSAEG-----CKFVGVLYAGLMIEKKSGLPKLIEYNVRFGDPECQVLMVRLESDLAEVLLAACRGEL 403 (519)
Q Consensus 337 ~~~~~~~a~g-----~~~~G~~~vdf~~~~~g~~~~viEiN~R~G~~~~~~~~~~~G~d~~~~~i~~~~g~~ 403 (519)
....+...+. ...-.++.+||++|++. ++++||||+.|+.... +.+ ++.+-+++++...+
T Consensus 297 ~l~a~~~~i~~~~~~~~~FEl~G~D~lid~~l-~~wllEVN~~P~~~q~--~i~----~l~~~~~~iavdp~ 361 (380)
T 3tig_A 297 CLSCLEPAISTKYLPYHSFQLFGFDFMVDKNL-KVWLIEVNGAPACAQK--LYA----ELCKGIVDLAISSV 361 (380)
T ss_dssp HHHHHHHHHCCTTSSSEECEEEEEEEEEBTTC-CEEEEEEESSCCCCTT--THH----HHHHHHHHHTTTTT
T ss_pred HHHHHHHHhhhcccCCceEEEEeEEEEEcCCC-cEEEEEEeCCCCccHH--hHH----HHHHHHHHHhcccc
Confidence 2222211221 11127888999999988 8999999999987542 222 56777777776664
No 74
>3mwd_A ATP-citrate synthase; ATP-grAsp, phosphohistidine, organic acid, lyase, transferas; HET: CIT; 2.10A {Homo sapiens} PDB: 3mwe_A*
Probab=97.23 E-value=0.00058 Score=69.73 Aligned_cols=100 Identities=24% Similarity=0.084 Sum_probs=72.4
Q ss_pred HHHHHHHHHHcCC---C---CCCeeecCCH---HHHHHHHHHhC-CCEEEEeCCCCC----CCcEEEeCCHHHHHHHHHH
Q 010065 188 KNFMKNLCDKYGI---P---TAKYKTFTDP---NAAKQYIQEEG-APIVVKADGLAA----GKGVIVAMTLEEAYEAVDS 253 (519)
Q Consensus 188 K~~~k~~l~~~Gi---~---~p~~~~v~~~---~~~~~~~~~~g-~P~VvKP~~g~g----s~GV~~v~~~~el~~a~~~ 253 (519)
-+..|++|.++++ | .+++..+++. +++.+.++.+| +|+|+|+.--.+ .-||.+..|.+|+.+++.+
T Consensus 8 Ey~~K~ll~~~~~~~~~~~~~~~~~~~~~~~~~~eA~~~a~~lg~~pvVvKaqv~~ggRgk~GGV~l~~s~eev~~aa~~ 87 (425)
T 3mwd_A 8 EQTGKELLYKFICTTSAIQNRFKYARVTPDTDWARLLQDHPWLLSQNLVVKPDQLIKRRGKLGLVGVNLTLDGVKSWLKP 87 (425)
T ss_dssp HHHHHHHHHHHCCCSSCBCSTTCCEEECTTCCHHHHHHHCGGGGTSCEEEEECSSCSCTTTTTCCEEEECHHHHHHHHTT
T ss_pred HHHHHHHHHHhccccCCccCCcceEEeCCCCCHHHHHHHHHHhCCCCEEEEeccccCCCCcCCeEEEECCHHHHHHHHHH
Confidence 4567889999998 3 2346666655 77777778888 999999954222 2389999999999999888
Q ss_pred HHhhccCC----CCCCcEEEEeccC---CcEEEEEEEEeCC
Q 010065 254 MLLKNAFG----SAGCRVIIEEFLE---GEEASFFALVDGE 287 (519)
Q Consensus 254 ~~~~~~~~----~~~~~~lvEe~I~---G~E~sv~~l~dg~ 287 (519)
++...... ..-..++||++++ ++|+-+.+..|..
T Consensus 88 ml~~~~~~~~~~~~v~~vlVe~~~~~~~~~E~ylgi~~Dr~ 128 (425)
T 3mwd_A 88 RLGQEATVGKATGFLKNFLIEPFVPHSQAEEFYVCIYATRE 128 (425)
T ss_dssp TTTCEEEETTEEEECCCEEEEECCCCCGGGEEEEEEEEETT
T ss_pred HHhhhhhccCCCceEEEEEEEecccCCCCceEEEEEEecCC
Confidence 87432100 0124699999997 3899999998764
No 75
>3pff_A ATP-citrate synthase; phosphohistidine, organic acid, ATP-grAsp, lyase, transferas; HET: TLA ADP; 2.30A {Homo sapiens}
Probab=96.90 E-value=0.0014 Score=72.12 Aligned_cols=100 Identities=25% Similarity=0.127 Sum_probs=73.6
Q ss_pred HHHHHHHHHHcCCC------CCCeeecCCH---HHHHHHHHHhC-CCEEEEeCCCCCC----CcEEEeCCHHHHHHHHHH
Q 010065 188 KNFMKNLCDKYGIP------TAKYKTFTDP---NAAKQYIQEEG-APIVVKADGLAAG----KGVIVAMTLEEAYEAVDS 253 (519)
Q Consensus 188 K~~~k~~l~~~Gi~------~p~~~~v~~~---~~~~~~~~~~g-~P~VvKP~~g~gs----~GV~~v~~~~el~~a~~~ 253 (519)
.+..|++|.++++| .+++..+++. +++.+.++.++ +|+|+|+.--.|+ -||.+..|.+|+.+++.+
T Consensus 8 Ey~aK~ll~~~~~~~~~~~~~~~~~~v~~~~~~~eA~~aa~~lg~~pvVvKaQv~~GgRGKaGGVkL~~s~eEa~~aa~~ 87 (829)
T 3pff_A 8 EQTGKELLYKFICTTSAIQNRFKYARVTPDTDWARLLQDHPWLLSQNLVVKPDQLIKRRGKLGLVGVNLTLDGVKSWLKP 87 (829)
T ss_dssp HHHHHHHHHHHCCCSSCBCSTTCCEEECTTCCHHHHHHHCTHHHHSCEEEEECSSCSCTTTTTCCEEEECHHHHHHHHTT
T ss_pred HHHHHHHHHHhCccccccccCCceEEeCCCCCHHHHHHHHHHhCCCCEEEEecccccCCCcCCeEEEECCHHHHHHHHHH
Confidence 46678899999998 5677777765 55666666777 9999999543333 389999999999999988
Q ss_pred HHhhccC-C---CCCCcEEEEeccC---CcEEEEEEEEeCC
Q 010065 254 MLLKNAF-G---SAGCRVIIEEFLE---GEEASFFALVDGE 287 (519)
Q Consensus 254 ~~~~~~~-~---~~~~~~lvEe~I~---G~E~sv~~l~dg~ 287 (519)
++..... . ..-..++||++++ ++|+-+.+..|..
T Consensus 88 iLg~~~~~~~p~~~V~gvLVE~m~~~~~~~ElYvgI~~Dr~ 128 (829)
T 3pff_A 88 RLGQEATVGKATGFLKNFLIEPFVPHSQAEEFYVCIYATRE 128 (829)
T ss_dssp TTTCEEEETTEEEECCCEEEEECCCCCGGGEEEEEEEEETT
T ss_pred HHHHHHhhcCCCceEEEEEEEecccCCCccEEEEEEEecCC
Confidence 8743211 0 0124699999996 3899999998764
No 76
>3nkl_A UDP-D-quinovosamine 4-dehydrogenase; alpha-beta fold, structural genomics, PSI-2, protein structu initiative; HET: MSE GOL; 1.90A {Vibrio fischeri}
Probab=93.13 E-value=0.27 Score=41.50 Aligned_cols=96 Identities=13% Similarity=0.169 Sum_probs=59.5
Q ss_pred CccEEEEEeCChhHHHHHHHHHhcCCCcEEEEecCCCCCcCCCCCccccCCCCCCHHHHHHHHHHcCCcEEEEC--C-Ch
Q 010065 81 QRVVVLVIGGGGREHALCYALKRSHSCDAVFCAPGNAGISNSGDATCIPDLDVLDGDAVISFCRKWSVGLVVVG--P-EA 157 (519)
Q Consensus 81 ~~~~vliiG~g~~~~~l~~~l~~~~g~~~v~~~~~~~~~~~~~~~~~v~~~d~~d~~~l~~~~~~~~id~Vi~g--~-E~ 157 (519)
++++++|+|+|.....++..+.+..|++++.+-++++..... ....++.+. .+.+.+++++.++|.|+.. . ..
T Consensus 3 ~~~~vlIiGaG~~g~~l~~~l~~~~g~~vvg~~d~~~~~~g~-~i~g~pV~g---~~~l~~~~~~~~id~viia~~~~~~ 78 (141)
T 3nkl_A 3 AKKKVLIYGAGSAGLQLANMLRQGKEFHPIAFIDDDRKKHKT-TMQGITIYR---PKYLERLIKKHCISTVLLAVPSASQ 78 (141)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHSSSEEEEEEECSCGGGTTC-EETTEEEEC---GGGHHHHHHHHTCCEEEECCTTSCH
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCcEEEEEEECCcccCCC-EecCeEEEC---HHHHHHHHHHCCCCEEEEeCCCCCH
Confidence 467899999998777788888776678776654443221100 000111112 3457777888899988873 2 33
Q ss_pred hhHHHHHHHHHHCCCCee-CCcHH
Q 010065 158 PLVSGLANKLVKAGIPTF-GPSSE 180 (519)
Q Consensus 158 ~~~~~~a~~le~~gip~~-g~~~~ 180 (519)
.....+.+.++..|+.+. -|+..
T Consensus 79 ~~~~~i~~~l~~~gv~v~~vP~~~ 102 (141)
T 3nkl_A 79 VQKKVIIESLAKLHVEVLTIPNLD 102 (141)
T ss_dssp HHHHHHHHHHHTTTCEEEECCCHH
T ss_pred HHHHHHHHHHHHcCCeEEECCCHH
Confidence 344567777888898864 35444
No 77
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=92.78 E-value=0.21 Score=40.28 Aligned_cols=91 Identities=19% Similarity=0.157 Sum_probs=56.0
Q ss_pred ccEEEEEeCChhHHHHHHHHHhcCC-CcEEEEecCCCCCcCC--CCCccccCCCCCCHHHHHHHHHHcCCcEEEECCChh
Q 010065 82 RVVVLVIGGGGREHALCYALKRSHS-CDAVFCAPGNAGISNS--GDATCIPDLDVLDGDAVISFCRKWSVGLVVVGPEAP 158 (519)
Q Consensus 82 ~~~vliiG~g~~~~~l~~~l~~~~g-~~~v~~~~~~~~~~~~--~~~~~v~~~d~~d~~~l~~~~~~~~id~Vi~g~E~~ 158 (519)
+++|+|+|+|.....++..|.+. | ++++.++.+....... .....+ ..|..+.+.+.+.++ ++|.|+...-..
T Consensus 5 ~~~v~I~G~G~iG~~~~~~l~~~-g~~~v~~~~r~~~~~~~~~~~~~~~~-~~d~~~~~~~~~~~~--~~d~vi~~~~~~ 80 (118)
T 3ic5_A 5 RWNICVVGAGKIGQMIAALLKTS-SNYSVTVADHDLAALAVLNRMGVATK-QVDAKDEAGLAKALG--GFDAVISAAPFF 80 (118)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHC-SSEEEEEEESCHHHHHHHHTTTCEEE-ECCTTCHHHHHHHTT--TCSEEEECSCGG
T ss_pred cCeEEEECCCHHHHHHHHHHHhC-CCceEEEEeCCHHHHHHHHhCCCcEE-EecCCCHHHHHHHHc--CCCEEEECCCch
Confidence 47899999987777788888877 7 7666665431111100 011222 457777777766653 689999843222
Q ss_pred hHHHHHHHHHHCCCCeeC
Q 010065 159 LVSGLANKLVKAGIPTFG 176 (519)
Q Consensus 159 ~~~~~a~~le~~gip~~g 176 (519)
....+.+.+.+.|++++-
T Consensus 81 ~~~~~~~~~~~~g~~~~~ 98 (118)
T 3ic5_A 81 LTPIIAKAAKAAGAHYFD 98 (118)
T ss_dssp GHHHHHHHHHHTTCEEEC
T ss_pred hhHHHHHHHHHhCCCEEE
Confidence 334566667778888763
No 78
>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*
Probab=92.58 E-value=1.1 Score=44.03 Aligned_cols=92 Identities=15% Similarity=0.082 Sum_probs=58.4
Q ss_pred ccEEEEEeCC-hhHHHHHHHHHhcCCCcEEEEecCCCCC-cC--------CCCCccccCCCCCCHHHHHHHHHHcCCcEE
Q 010065 82 RVVVLVIGGG-GREHALCYALKRSHSCDAVFCAPGNAGI-SN--------SGDATCIPDLDVLDGDAVISFCRKWSVGLV 151 (519)
Q Consensus 82 ~~~vliiG~g-~~~~~l~~~l~~~~g~~~v~~~~~~~~~-~~--------~~~~~~v~~~d~~d~~~l~~~~~~~~id~V 151 (519)
+++|+|+|+. .....++..|.+. |++++.+..+.... .. ......+ ..|..|.+.+.+++++.++|.|
T Consensus 10 ~~~IlVtGatG~iG~~l~~~L~~~-g~~V~~l~R~~~~~~~~~~~~~~l~~~~v~~~-~~Dl~d~~~l~~~~~~~~~d~V 87 (346)
T 3i6i_A 10 KGRVLIAGATGFIGQFVATASLDA-HRPTYILARPGPRSPSKAKIFKALEDKGAIIV-YGLINEQEAMEKILKEHEIDIV 87 (346)
T ss_dssp -CCEEEECTTSHHHHHHHHHHHHT-TCCEEEEECSSCCCHHHHHHHHHHHHTTCEEE-ECCTTCHHHHHHHHHHTTCCEE
T ss_pred CCeEEEECCCcHHHHHHHHHHHHC-CCCEEEEECCCCCChhHHHHHHHHHhCCcEEE-EeecCCHHHHHHHHhhCCCCEE
Confidence 5789999984 4566788888877 88887775432110 00 0112223 5788899999999988899999
Q ss_pred EEC-C--ChhhHHHHHHHHHHCC-CCee
Q 010065 152 VVG-P--EAPLVSGLANKLVKAG-IPTF 175 (519)
Q Consensus 152 i~g-~--E~~~~~~~a~~le~~g-ip~~ 175 (519)
|.. + .......+.+.+.+.| ++.+
T Consensus 88 i~~a~~~n~~~~~~l~~aa~~~g~v~~~ 115 (346)
T 3i6i_A 88 VSTVGGESILDQIALVKAMKAVGTIKRF 115 (346)
T ss_dssp EECCCGGGGGGHHHHHHHHHHHCCCSEE
T ss_pred EECCchhhHHHHHHHHHHHHHcCCceEE
Confidence 983 2 1111234566666677 6643
No 79
>3n6x_A Putative glutathionylspermidine synthase; domain of unknown function (DUF404), structural genomics; 2.35A {Methylobacillus flagellatus}
Probab=92.55 E-value=0.18 Score=51.94 Aligned_cols=70 Identities=17% Similarity=0.183 Sum_probs=50.8
Q ss_pred CCCCCeeecCCHHHHHHHHHHhCCCEEEEeCCCCCCCcEEE--eCCHHHHHHHHHHHHhhccCCCCCCcEEEEeccCCc
Q 010065 200 IPTAKYKTFTDPNAAKQYIQEEGAPIVVKADGLAAGKGVIV--AMTLEEAYEAVDSMLLKNAFGSAGCRVIIEEFLEGE 276 (519)
Q Consensus 200 i~~p~~~~v~~~~~~~~~~~~~g~P~VvKP~~g~gs~GV~~--v~~~~el~~a~~~~~~~~~~~~~~~~~lvEe~I~G~ 276 (519)
++..+++...+.++...+++.+. -+|+||+++.+|.|+.+ --+.+++.+..+++.. ....+++|++++-.
T Consensus 341 l~~VpT~~c~~~~~~~~vl~~l~-~lViKp~~g~gg~gv~iG~~~s~~e~~~~~~~i~~------~p~~yIaQe~v~ls 412 (474)
T 3n6x_A 341 LSNVPTYQLSKADDLKYVLDNLA-ELVVKEVQGSGGYGMLVGPAASKQELEDFRQRILA------NPANYIAQPTLALS 412 (474)
T ss_dssp SEECCCEETTSHHHHHHHHHSGG-GEEEEECCCE-----EEGGGCCHHHHHHHHHHHHH------SGGGEEEEECCCCC
T ss_pred ccCCCceecCCHHHHHHHHhchh-heEEEecCCCCCCceEECCcCCHHHHHHHHHHHHh------CCCCEEEeeccCCc
Confidence 45566777778888887777766 79999999999999988 4678888888887764 23569999999864
No 80
>3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii}
Probab=90.67 E-value=0.41 Score=47.71 Aligned_cols=116 Identities=16% Similarity=0.171 Sum_probs=67.8
Q ss_pred CccEEEEEeCChhHHHHHHHHHhcCCCcEEEEecCCCCCcCC-CCCccccCCCCCCHHHHHHHHHHcCCcEEEECCChhh
Q 010065 81 QRVVVLVIGGGGREHALCYALKRSHSCDAVFCAPGNAGISNS-GDATCIPDLDVLDGDAVISFCRKWSVGLVVVGPEAPL 159 (519)
Q Consensus 81 ~~~~vliiG~g~~~~~l~~~l~~~~g~~~v~~~~~~~~~~~~-~~~~~v~~~d~~d~~~l~~~~~~~~id~Vi~g~E~~~ 159 (519)
.+|||+|+|+|.....++..|.+. +++.+.+.+....... .....+ .+|..|.+.+.++++ +.|+|+...-..+
T Consensus 15 ~~mkilvlGaG~vG~~~~~~L~~~--~~v~~~~~~~~~~~~~~~~~~~~-~~d~~d~~~l~~~~~--~~DvVi~~~p~~~ 89 (365)
T 3abi_A 15 RHMKVLILGAGNIGRAIAWDLKDE--FDVYIGDVNNENLEKVKEFATPL-KVDASNFDKLVEVMK--EFELVIGALPGFL 89 (365)
T ss_dssp -CCEEEEECCSHHHHHHHHHHTTT--SEEEEEESCHHHHHHHTTTSEEE-ECCTTCHHHHHHHHT--TCSEEEECCCGGG
T ss_pred CccEEEEECCCHHHHHHHHHHhcC--CCeEEEEcCHHHHHHHhccCCcE-EEecCCHHHHHHHHh--CCCEEEEecCCcc
Confidence 468999999987666678888653 4555444321111111 112223 568888899888876 5688887322222
Q ss_pred HHHHHHHHHHCCCCeeCCcHHHHHHhcCHHHHHHHHHHcCCCCCCe
Q 010065 160 VSGLANKLVKAGIPTFGPSSEAAALEGSKNFMKNLCDKYGIPTAKY 205 (519)
Q Consensus 160 ~~~~a~~le~~gip~~g~~~~~~~~~~dK~~~k~~l~~~Gi~~p~~ 205 (519)
-..+++.+-+.|++|+-.+... ..-..+.+.++++|+.....
T Consensus 90 ~~~v~~~~~~~g~~yvD~s~~~----~~~~~l~~~a~~~g~~~i~~ 131 (365)
T 3abi_A 90 GFKSIKAAIKSKVDMVDVSFMP----ENPLELRDEAEKAQVTIVFD 131 (365)
T ss_dssp HHHHHHHHHHHTCEEEECCCCS----SCGGGGHHHHHHTTCEEECC
T ss_pred cchHHHHHHhcCcceEeeeccc----hhhhhhhhhhccCCceeeec
Confidence 2356777888899987433211 11123456677888765443
No 81
>2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A*
Probab=90.04 E-value=1.1 Score=43.69 Aligned_cols=72 Identities=15% Similarity=0.132 Sum_probs=48.4
Q ss_pred CCccEEEEEeCC-hhHHHHHHHHHhcCCCcEEEEecCCCCCc----CCCCCccccCCCCCCHHHHHHHHHHcCCcEEEE
Q 010065 80 GQRVVVLVIGGG-GREHALCYALKRSHSCDAVFCAPGNAGIS----NSGDATCIPDLDVLDGDAVISFCRKWSVGLVVV 153 (519)
Q Consensus 80 ~~~~~vliiG~g-~~~~~l~~~l~~~~g~~~v~~~~~~~~~~----~~~~~~~v~~~d~~d~~~l~~~~~~~~id~Vi~ 153 (519)
.+.|+|||+|++ +....++..|.+. |++++.++....... .......+ ..|..|.+.+.+++++.++|+||-
T Consensus 18 ~~~~~vlVTGasG~iG~~l~~~L~~~-g~~V~~~~r~~~~~~~~~~~l~~v~~~-~~Dl~d~~~~~~~~~~~~~D~vih 94 (330)
T 2pzm_A 18 GSHMRILITGGAGCLGSNLIEHWLPQ-GHEILVIDNFATGKREVLPPVAGLSVI-EGSVTDAGLLERAFDSFKPTHVVH 94 (330)
T ss_dssp TTCCEEEEETTTSHHHHHHHHHHGGG-TCEEEEEECCSSSCGGGSCSCTTEEEE-ECCTTCHHHHHHHHHHHCCSEEEE
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHC-CCEEEEEECCCccchhhhhccCCceEE-EeeCCCHHHHHHHHhhcCCCEEEE
Confidence 345799999975 4566788888877 888877764322211 11111223 568888888888887668999997
No 82
>4egb_A DTDP-glucose 4,6-dehydratase; rhamnose pathway, center for structural genomics of infectio diseases, csgid, niaid; HET: NAD SUC; 3.00A {Bacillus anthracis}
Probab=89.65 E-value=0.73 Score=45.06 Aligned_cols=71 Identities=14% Similarity=0.182 Sum_probs=46.2
Q ss_pred CccEEEEEeCC-hhHHHHHHHHHhcCC--CcEEEEecCCC-C-CcCC------CCCccccCCCCCCHHHHHHHHHHcCCc
Q 010065 81 QRVVVLVIGGG-GREHALCYALKRSHS--CDAVFCAPGNA-G-ISNS------GDATCIPDLDVLDGDAVISFCRKWSVG 149 (519)
Q Consensus 81 ~~~~vliiG~g-~~~~~l~~~l~~~~g--~~~v~~~~~~~-~-~~~~------~~~~~v~~~d~~d~~~l~~~~~~~~id 149 (519)
.+|+|||+|+. .....++..|.+. | ++++.++.... . .... .....+ ..|..|.+.+.++++..++|
T Consensus 23 ~~~~vlVtGatG~iG~~l~~~L~~~-g~~~~v~~~~~~~~~~~~~~l~~~~~~~~~~~~-~~Dl~d~~~~~~~~~~~~~d 100 (346)
T 4egb_A 23 NAMNILVTGGAGFIGSNFVHYMLQS-YETYKIINFDALTYSGNLNNVKSIQDHPNYYFV-KGEIQNGELLEHVIKERDVQ 100 (346)
T ss_dssp -CEEEEEETTTSHHHHHHHHHHHHH-CTTEEEEEEECCCTTCCGGGGTTTTTCTTEEEE-ECCTTCHHHHHHHHHHHTCC
T ss_pred CCCeEEEECCccHHHHHHHHHHHhh-CCCcEEEEEeccccccchhhhhhhccCCCeEEE-EcCCCCHHHHHHHHhhcCCC
Confidence 46899999985 4556788888877 6 66655543321 1 1110 011222 56888999999988888899
Q ss_pred EEEE
Q 010065 150 LVVV 153 (519)
Q Consensus 150 ~Vi~ 153 (519)
+||-
T Consensus 101 ~Vih 104 (346)
T 4egb_A 101 VIVN 104 (346)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 9996
No 83
>1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2
Probab=88.77 E-value=2.7 Score=40.07 Aligned_cols=89 Identities=12% Similarity=0.171 Sum_probs=54.2
Q ss_pred ccEEEEEeC-ChhHHHHHHHHHhcCCCcEEEEecCCCCC---c--------CCCCCccccCCCCCCHHHHHHHHHHcCCc
Q 010065 82 RVVVLVIGG-GGREHALCYALKRSHSCDAVFCAPGNAGI---S--------NSGDATCIPDLDVLDGDAVISFCRKWSVG 149 (519)
Q Consensus 82 ~~~vliiG~-g~~~~~l~~~l~~~~g~~~v~~~~~~~~~---~--------~~~~~~~v~~~d~~d~~~l~~~~~~~~id 149 (519)
+++|+|+|+ |.....++..|.+. |++++.+..+.... . .......+ ..|..|.+.+.+.++ ++|
T Consensus 4 ~~~ilVtGatG~iG~~l~~~L~~~-g~~V~~l~R~~~~~~~~~~~~~~~~l~~~~v~~v-~~D~~d~~~l~~~~~--~~d 79 (308)
T 1qyc_A 4 RSRILLIGATGYIGRHVAKASLDL-GHPTFLLVRESTASSNSEKAQLLESFKASGANIV-HGSIDDHASLVEAVK--NVD 79 (308)
T ss_dssp CCCEEEESTTSTTHHHHHHHHHHT-TCCEEEECCCCCTTTTHHHHHHHHHHHTTTCEEE-CCCTTCHHHHHHHHH--TCS
T ss_pred CCEEEEEcCCcHHHHHHHHHHHhC-CCCEEEEECCcccccCHHHHHHHHHHHhCCCEEE-EeccCCHHHHHHHHc--CCC
Confidence 578999997 44566788888877 88877765432110 0 00112223 578888888877775 589
Q ss_pred EEEEC-CC--hhhHHHHHHHHHHCC-CCe
Q 010065 150 LVVVG-PE--APLVSGLANKLVKAG-IPT 174 (519)
Q Consensus 150 ~Vi~g-~E--~~~~~~~a~~le~~g-ip~ 174 (519)
+||.. +. ......+.+.+.+.| ++.
T Consensus 80 ~vi~~a~~~~~~~~~~l~~aa~~~g~v~~ 108 (308)
T 1qyc_A 80 VVISTVGSLQIESQVNIIKAIKEVGTVKR 108 (308)
T ss_dssp EEEECCCGGGSGGGHHHHHHHHHHCCCSE
T ss_pred EEEECCcchhhhhHHHHHHHHHhcCCCce
Confidence 99973 21 111234556666667 653
No 84
>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*
Probab=88.68 E-value=0.96 Score=44.22 Aligned_cols=66 Identities=18% Similarity=0.124 Sum_probs=44.1
Q ss_pred CCccEEEEEeCC-hhHHHHHHHHHhcCCCcEEEEecCCCCCcCCCCCccccCCCCCCHHHHHHHHHHcCCcEEEE
Q 010065 80 GQRVVVLVIGGG-GREHALCYALKRSHSCDAVFCAPGNAGISNSGDATCIPDLDVLDGDAVISFCRKWSVGLVVV 153 (519)
Q Consensus 80 ~~~~~vliiG~g-~~~~~l~~~l~~~~g~~~v~~~~~~~~~~~~~~~~~v~~~d~~d~~~l~~~~~~~~id~Vi~ 153 (519)
.++++|||+|+. .....++..|.+. |++++.++..... .....+ ..|..|.+.+.++++ ++|+||-
T Consensus 17 ~~~~~vlVtGatG~iG~~l~~~L~~~-G~~V~~~~r~~~~----~~~~~~-~~Dl~d~~~~~~~~~--~~d~vih 83 (347)
T 4id9_A 17 RGSHMILVTGSAGRVGRAVVAALRTQ-GRTVRGFDLRPSG----TGGEEV-VGSLEDGQALSDAIM--GVSAVLH 83 (347)
T ss_dssp ----CEEEETTTSHHHHHHHHHHHHT-TCCEEEEESSCCS----SCCSEE-ESCTTCHHHHHHHHT--TCSEEEE
T ss_pred cCCCEEEEECCCChHHHHHHHHHHhC-CCEEEEEeCCCCC----CCccEE-ecCcCCHHHHHHHHh--CCCEEEE
Confidence 346899999985 4566788888877 8988877644221 112233 568888888877775 7899986
No 85
>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}
Probab=88.54 E-value=1 Score=40.88 Aligned_cols=68 Identities=18% Similarity=0.190 Sum_probs=45.3
Q ss_pred ccEEEEEeCCh-hHHHHHHHHHhcCCCcEEEEecCCCCCcCC-CCCccccCCCCCCHHHHHHHHHHcCCcEEEE
Q 010065 82 RVVVLVIGGGG-REHALCYALKRSHSCDAVFCAPGNAGISNS-GDATCIPDLDVLDGDAVISFCRKWSVGLVVV 153 (519)
Q Consensus 82 ~~~vliiG~g~-~~~~l~~~l~~~~g~~~v~~~~~~~~~~~~-~~~~~v~~~d~~d~~~l~~~~~~~~id~Vi~ 153 (519)
+++|+|+|+.| ....++..|.+. |++++.++.+....... .....+ ..|..|.+.+.++++ ++|+||.
T Consensus 4 m~~ilItGatG~iG~~l~~~L~~~-g~~V~~~~r~~~~~~~~~~~~~~~-~~Dl~d~~~~~~~~~--~~d~vi~ 73 (227)
T 3dhn_A 4 VKKIVLIGASGFVGSALLNEALNR-GFEVTAVVRHPEKIKIENEHLKVK-KADVSSLDEVCEVCK--GADAVIS 73 (227)
T ss_dssp CCEEEEETCCHHHHHHHHHHHHTT-TCEEEEECSCGGGCCCCCTTEEEE-CCCTTCHHHHHHHHT--TCSEEEE
T ss_pred CCEEEEEcCCchHHHHHHHHHHHC-CCEEEEEEcCcccchhccCceEEE-EecCCCHHHHHHHhc--CCCEEEE
Confidence 57999999764 456788888877 88887775432111111 122233 578888888887775 6899987
No 86
>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A}
Probab=88.20 E-value=2.9 Score=38.27 Aligned_cols=68 Identities=21% Similarity=0.207 Sum_probs=43.6
Q ss_pred ccEEEEEeCC-hhHHHHHHHHHhcCC-CcEEEEecCCCCCcCC--CCCccccCCCCCCHHHHHHHHHHcCCcEEEE
Q 010065 82 RVVVLVIGGG-GREHALCYALKRSHS-CDAVFCAPGNAGISNS--GDATCIPDLDVLDGDAVISFCRKWSVGLVVV 153 (519)
Q Consensus 82 ~~~vliiG~g-~~~~~l~~~l~~~~g-~~~v~~~~~~~~~~~~--~~~~~v~~~d~~d~~~l~~~~~~~~id~Vi~ 153 (519)
+++|+|+|+. +....++..|.+. | ++++.+..+....... .....+ ..|..|.+.+.++++ ++|.||.
T Consensus 23 mk~vlVtGatG~iG~~l~~~L~~~-G~~~V~~~~R~~~~~~~~~~~~~~~~-~~Dl~d~~~~~~~~~--~~D~vv~ 94 (236)
T 3qvo_A 23 MKNVLILGAGGQIARHVINQLADK-QTIKQTLFARQPAKIHKPYPTNSQII-MGDVLNHAALKQAMQ--GQDIVYA 94 (236)
T ss_dssp CEEEEEETTTSHHHHHHHHHHTTC-TTEEEEEEESSGGGSCSSCCTTEEEE-ECCTTCHHHHHHHHT--TCSEEEE
T ss_pred ccEEEEEeCCcHHHHHHHHHHHhC-CCceEEEEEcChhhhcccccCCcEEE-EecCCCHHHHHHHhc--CCCEEEE
Confidence 5789999964 4566788888876 7 7777665432111111 112223 568888888877775 5798886
No 87
>1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2
Probab=87.97 E-value=4.4 Score=38.61 Aligned_cols=88 Identities=16% Similarity=0.131 Sum_probs=54.5
Q ss_pred ccEEEEEeCC-hhHHHHHHHHHhcCCCcEEEEecCCCCC--c--------CCCCCccccCCCCCCHHHHHHHHHHcCCcE
Q 010065 82 RVVVLVIGGG-GREHALCYALKRSHSCDAVFCAPGNAGI--S--------NSGDATCIPDLDVLDGDAVISFCRKWSVGL 150 (519)
Q Consensus 82 ~~~vliiG~g-~~~~~l~~~l~~~~g~~~v~~~~~~~~~--~--------~~~~~~~v~~~d~~d~~~l~~~~~~~~id~ 150 (519)
+++|+|+|+. .....++..|.+. |++++.+..+.... . .......+ ..|..|.+.+.+.++ ++|.
T Consensus 4 ~~~ilVtGatG~iG~~l~~~L~~~-g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~~-~~D~~d~~~l~~~~~--~~d~ 79 (313)
T 1qyd_A 4 KSRVLIVGGTGYIGKRIVNASISL-GHPTYVLFRPEVVSNIDKVQMLLYFKQLGAKLI-EASLDDHQRLVDALK--QVDV 79 (313)
T ss_dssp CCCEEEESTTSTTHHHHHHHHHHT-TCCEEEECCSCCSSCHHHHHHHHHHHTTTCEEE-CCCSSCHHHHHHHHT--TCSE
T ss_pred CCEEEEEcCCcHHHHHHHHHHHhC-CCcEEEEECCCcccchhHHHHHHHHHhCCeEEE-eCCCCCHHHHHHHHh--CCCE
Confidence 5789999974 4556788888877 88887765432110 0 00112223 578888888877765 6899
Q ss_pred EEEC-C------ChhhHHHHHHHHHHCC-CC
Q 010065 151 VVVG-P------EAPLVSGLANKLVKAG-IP 173 (519)
Q Consensus 151 Vi~g-~------E~~~~~~~a~~le~~g-ip 173 (519)
||.. + +......+.+.+.+.| ++
T Consensus 80 vi~~a~~~~~~~~~~~~~~l~~aa~~~g~v~ 110 (313)
T 1qyd_A 80 VISALAGGVLSHHILEQLKLVEAIKEAGNIK 110 (313)
T ss_dssp EEECCCCSSSSTTTTTHHHHHHHHHHSCCCS
T ss_pred EEECCccccchhhHHHHHHHHHHHHhcCCCc
Confidence 9972 1 1222345666677777 65
No 88
>2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa}
Probab=87.80 E-value=3.3 Score=39.36 Aligned_cols=89 Identities=12% Similarity=0.193 Sum_probs=53.8
Q ss_pred ccEEEEEeC-ChhHHHHHHHHHhcCCCcEEEEecCC-CCC---cC--------CCCCccccCCCCCCHHHHHHHHHHcCC
Q 010065 82 RVVVLVIGG-GGREHALCYALKRSHSCDAVFCAPGN-AGI---SN--------SGDATCIPDLDVLDGDAVISFCRKWSV 148 (519)
Q Consensus 82 ~~~vliiG~-g~~~~~l~~~l~~~~g~~~v~~~~~~-~~~---~~--------~~~~~~v~~~d~~d~~~l~~~~~~~~i 148 (519)
+++|+|+|+ |.....++..|.+. |++++.+..+. ... .. ......+ ..|..|.+.+.+.++ ++
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~~-g~~V~~~~R~~~~~~~~~~~~~~~~~l~~~~v~~v-~~D~~d~~~l~~~~~--~~ 77 (307)
T 2gas_A 2 ENKILILGPTGAIGRHIVWASIKA-GNPTYALVRKTITAANPETKEELIDNYQSLGVILL-EGDINDHETLVKAIK--QV 77 (307)
T ss_dssp CCCEEEESTTSTTHHHHHHHHHHH-TCCEEEEECCSCCSSCHHHHHHHHHHHHHTTCEEE-ECCTTCHHHHHHHHT--TC
T ss_pred CcEEEEECCCchHHHHHHHHHHhC-CCcEEEEECCCcccCChHHHHHHHHHHHhCCCEEE-EeCCCCHHHHHHHHh--CC
Confidence 468999997 44566788888877 88877765432 100 00 0112223 568888888877765 68
Q ss_pred cEEEEC-C--ChhhHHHHHHHHHHCC-CCe
Q 010065 149 GLVVVG-P--EAPLVSGLANKLVKAG-IPT 174 (519)
Q Consensus 149 d~Vi~g-~--E~~~~~~~a~~le~~g-ip~ 174 (519)
|.||.. + .......+.+.+.+.| ++.
T Consensus 78 d~vi~~a~~~~~~~~~~l~~aa~~~g~v~~ 107 (307)
T 2gas_A 78 DIVICAAGRLLIEDQVKIIKAIKEAGNVKK 107 (307)
T ss_dssp SEEEECSSSSCGGGHHHHHHHHHHHCCCSE
T ss_pred CEEEECCcccccccHHHHHHHHHhcCCceE
Confidence 999972 2 1122234556666667 653
No 89
>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*
Probab=87.67 E-value=2.8 Score=37.91 Aligned_cols=87 Identities=13% Similarity=0.152 Sum_probs=53.0
Q ss_pred cEEEEEeC-ChhHHHHHHHHH-hcCCCcEEEEecCCC-CCc----CCCCCccccCCCCCCHHHHHHHHHHcCCcEEEE--
Q 010065 83 VVVLVIGG-GGREHALCYALK-RSHSCDAVFCAPGNA-GIS----NSGDATCIPDLDVLDGDAVISFCRKWSVGLVVV-- 153 (519)
Q Consensus 83 ~~vliiG~-g~~~~~l~~~l~-~~~g~~~v~~~~~~~-~~~----~~~~~~~v~~~d~~d~~~l~~~~~~~~id~Vi~-- 153 (519)
++|+|+|+ |+....+++.|. +. |++++.+..+.. ... .......+ ..|..|.+.+.+.++ ++|.||.
T Consensus 6 k~vlVtGasg~iG~~~~~~l~~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~-~~D~~d~~~~~~~~~--~~d~vv~~a 81 (221)
T 3r6d_A 6 XYITILGAAGQIAQXLTATLLTYT-DMHITLYGRQLKTRIPPEIIDHERVTVI-EGSFQNPGXLEQAVT--NAEVVFVGA 81 (221)
T ss_dssp SEEEEESTTSHHHHHHHHHHHHHC-CCEEEEEESSHHHHSCHHHHTSTTEEEE-ECCTTCHHHHHHHHT--TCSEEEESC
T ss_pred EEEEEEeCCcHHHHHHHHHHHhcC-CceEEEEecCccccchhhccCCCceEEE-ECCCCCHHHHHHHHc--CCCEEEEcC
Confidence 45999996 455677888888 55 898877754321 111 11112223 568888888877774 6899997
Q ss_pred CCChhhHHHHHHHHHHCCCC
Q 010065 154 GPEAPLVSGLANKLVKAGIP 173 (519)
Q Consensus 154 g~E~~~~~~~a~~le~~gip 173 (519)
+..+...+.+.+.+.+.|++
T Consensus 82 g~~n~~~~~~~~~~~~~~~~ 101 (221)
T 3r6d_A 82 MESGSDMASIVKALSRXNIR 101 (221)
T ss_dssp CCCHHHHHHHHHHHHHTTCC
T ss_pred CCCChhHHHHHHHHHhcCCC
Confidence 22111144555666666753
No 90
>2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica}
Probab=87.08 E-value=1.6 Score=42.47 Aligned_cols=72 Identities=14% Similarity=0.014 Sum_probs=47.2
Q ss_pred CCccEEEEEeCC-hhHHHHHHHHHhcCCCcEEEEecCCCCC-cCC---CCCccccCCCCCCHHHHHHHHHHcCCcEEEE
Q 010065 80 GQRVVVLVIGGG-GREHALCYALKRSHSCDAVFCAPGNAGI-SNS---GDATCIPDLDVLDGDAVISFCRKWSVGLVVV 153 (519)
Q Consensus 80 ~~~~~vliiG~g-~~~~~l~~~l~~~~g~~~v~~~~~~~~~-~~~---~~~~~v~~~d~~d~~~l~~~~~~~~id~Vi~ 153 (519)
.++++|||+|+. .....++..|.+. |++++.++...... ... .....+ ..|..|.+.+.++++..++|+||-
T Consensus 19 ~~~~~vlVTGatG~iG~~l~~~L~~~-g~~V~~~~r~~~~~~~~l~~~~~~~~~-~~Dl~d~~~~~~~~~~~~~D~vih 95 (333)
T 2q1w_A 19 SHMKKVFITGICGQIGSHIAELLLER-GDKVVGIDNFATGRREHLKDHPNLTFV-EGSIADHALVNQLIGDLQPDAVVH 95 (333)
T ss_dssp --CCEEEEETTTSHHHHHHHHHHHHT-TCEEEEEECCSSCCGGGSCCCTTEEEE-ECCTTCHHHHHHHHHHHCCSEEEE
T ss_pred CCCCEEEEeCCccHHHHHHHHHHHHC-CCEEEEEECCCccchhhHhhcCCceEE-EEeCCCHHHHHHHHhccCCcEEEE
Confidence 356899999965 4556788888877 88887776432211 111 111223 568888888888887777999997
No 91
>1y81_A Conserved hypothetical protein; hyperthermophIle, structural genomics, PSI, protein structure initiative; HET: COA; 1.70A {Pyrococcus furiosus} SCOP: c.2.1.8
Probab=87.04 E-value=5.1 Score=33.63 Aligned_cols=37 Identities=11% Similarity=0.169 Sum_probs=24.6
Q ss_pred CCCCccEEEEEeC----ChhHHHHHHHHHhcCCCcEEEEecC
Q 010065 78 NAGQRVVVLVIGG----GGREHALCYALKRSHSCDAVFCAPG 115 (519)
Q Consensus 78 ~~~~~~~vliiG~----g~~~~~l~~~l~~~~g~~~v~~~~~ 115 (519)
...+.++|.|+|. |.....+++.|.+. |++++.++|.
T Consensus 10 ~l~~p~~IavIGaS~~~g~~G~~~~~~L~~~-G~~V~~vnp~ 50 (138)
T 1y81_A 10 NSKEFRKIALVGASKNPAKYGNIILKDLLSK-GFEVLPVNPN 50 (138)
T ss_dssp ----CCEEEEETCCSCTTSHHHHHHHHHHHT-TCEEEEECTT
T ss_pred cccCCCeEEEEeecCCCCCHHHHHHHHHHHC-CCEEEEeCCC
Confidence 3456788999998 54556678888776 8986666554
No 92
>3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0
Probab=87.00 E-value=2.1 Score=41.53 Aligned_cols=71 Identities=15% Similarity=0.129 Sum_probs=48.8
Q ss_pred CccEEEEEeCC-hhHHHHHHHHHhcCCCcEEEEecCCCCCcC---------CCCCccccCCCCCCHHHHHHHHHHcCCcE
Q 010065 81 QRVVVLVIGGG-GREHALCYALKRSHSCDAVFCAPGNAGISN---------SGDATCIPDLDVLDGDAVISFCRKWSVGL 150 (519)
Q Consensus 81 ~~~~vliiG~g-~~~~~l~~~l~~~~g~~~v~~~~~~~~~~~---------~~~~~~v~~~d~~d~~~l~~~~~~~~id~ 150 (519)
.+++|||+|++ +....++..|.+. |++++.++........ ......+ ..|..|.+.+.++++..++|.
T Consensus 4 ~~~~vlVTGatG~iG~~l~~~L~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~-~~Dl~d~~~~~~~~~~~~~d~ 81 (341)
T 3enk_A 4 TKGTILVTGGAGYIGSHTAVELLAH-GYDVVIADNLVNSKREAIARIEKITGKTPAFH-ETDVSDERALARIFDAHPITA 81 (341)
T ss_dssp SSCEEEEETTTSHHHHHHHHHHHHT-TCEEEEECCCSSSCTHHHHHHHHHHSCCCEEE-CCCTTCHHHHHHHHHHSCCCE
T ss_pred CCcEEEEecCCcHHHHHHHHHHHHC-CCcEEEEecCCcchHHHHHHHHhhcCCCceEE-EeecCCHHHHHHHHhccCCcE
Confidence 45799999965 4556788888877 8988777533211110 0012223 578889999999888888999
Q ss_pred EEE
Q 010065 151 VVV 153 (519)
Q Consensus 151 Vi~ 153 (519)
|+-
T Consensus 82 vih 84 (341)
T 3enk_A 82 AIH 84 (341)
T ss_dssp EEE
T ss_pred EEE
Confidence 997
No 93
>2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A*
Probab=86.92 E-value=2.6 Score=40.46 Aligned_cols=116 Identities=16% Similarity=0.208 Sum_probs=68.4
Q ss_pred cEEEEEeC-ChhHHHHHHHHHhcCCCcEEEEecCCCCCcC------CCCCccccCCCCCCHHHHHHHHHHcCCcEEEEC-
Q 010065 83 VVVLVIGG-GGREHALCYALKRSHSCDAVFCAPGNAGISN------SGDATCIPDLDVLDGDAVISFCRKWSVGLVVVG- 154 (519)
Q Consensus 83 ~~vliiG~-g~~~~~l~~~l~~~~g~~~v~~~~~~~~~~~------~~~~~~v~~~d~~d~~~l~~~~~~~~id~Vi~g- 154 (519)
++|+|+|+ |.....++..|.+. |++++.+..+...... ......+ ..|..|.+.+.+.++ ++|.||..
T Consensus 12 ~~ilVtGatG~iG~~l~~~L~~~-g~~V~~l~R~~~~~~~~~~~l~~~~v~~v-~~Dl~d~~~l~~a~~--~~d~vi~~a 87 (318)
T 2r6j_A 12 SKILIFGGTGYIGNHMVKGSLKL-GHPTYVFTRPNSSKTTLLDEFQSLGAIIV-KGELDEHEKLVELMK--KVDVVISAL 87 (318)
T ss_dssp CCEEEETTTSTTHHHHHHHHHHT-TCCEEEEECTTCSCHHHHHHHHHTTCEEE-ECCTTCHHHHHHHHT--TCSEEEECC
T ss_pred CeEEEECCCchHHHHHHHHHHHC-CCcEEEEECCCCchhhHHHHhhcCCCEEE-EecCCCHHHHHHHHc--CCCEEEECC
Confidence 58999997 44566788888877 8888777644221110 0112233 578888888877775 58999973
Q ss_pred CC--hhhHHHHHHHHHHCC-CCee-----CCcH-------HHHHHhcCHHHHHHHHHHcCCCC
Q 010065 155 PE--APLVSGLANKLVKAG-IPTF-----GPSS-------EAAALEGSKNFMKNLCDKYGIPT 202 (519)
Q Consensus 155 ~E--~~~~~~~a~~le~~g-ip~~-----g~~~-------~~~~~~~dK~~~k~~l~~~Gi~~ 202 (519)
+. ......+.+.+.+.| ++.+ |.+. ........|....+++++.|++.
T Consensus 88 ~~~~~~~~~~l~~aa~~~g~v~~~v~S~~g~~~~~~~~~~p~~~~y~sK~~~e~~~~~~~~~~ 150 (318)
T 2r6j_A 88 AFPQILDQFKILEAIKVAGNIKRFLPSDFGVEEDRINALPPFEALIERKRMIRRAIEEANIPY 150 (318)
T ss_dssp CGGGSTTHHHHHHHHHHHCCCCEEECSCCSSCTTTCCCCHHHHHHHHHHHHHHHHHHHTTCCB
T ss_pred chhhhHHHHHHHHHHHhcCCCCEEEeeccccCcccccCCCCcchhHHHHHHHHHHHHhcCCCe
Confidence 21 111234556666666 6432 2110 01122366777778888877764
No 94
>4ina_A Saccharopine dehydrogenase; structural genomics, PSI-biology, northeast structural genom consortium, NESG, oxidoreductas; 2.49A {Wolinella succinogenes}
Probab=86.79 E-value=1.4 Score=44.55 Aligned_cols=119 Identities=12% Similarity=0.152 Sum_probs=67.7
Q ss_pred cEEEEEeCChhHHHHHHHHHhcCCC--cEEEEecCCCCCcCC---------CCCccccCCCCCCHHHHHHHHHHcCCcEE
Q 010065 83 VVVLVIGGGGREHALCYALKRSHSC--DAVFCAPGNAGISNS---------GDATCIPDLDVLDGDAVISFCRKWSVGLV 151 (519)
Q Consensus 83 ~~vliiG~g~~~~~l~~~l~~~~g~--~~v~~~~~~~~~~~~---------~~~~~v~~~d~~d~~~l~~~~~~~~id~V 151 (519)
++|+|+|+|+....+++.|.+..++ ++++.+.+....... .....+ ..|..|.+.+.+++++.++|+|
T Consensus 2 ~kVlIiGaGgiG~~ia~~L~~~g~~~~~V~v~~r~~~~~~~la~~l~~~~~~~~~~~-~~D~~d~~~l~~~l~~~~~DvV 80 (405)
T 4ina_A 2 AKVLQIGAGGVGGVVAHKMAMNREVFSHITLASRTLSKCQEIAQSIKAKGYGEIDIT-TVDADSIEELVALINEVKPQIV 80 (405)
T ss_dssp CEEEEECCSHHHHHHHHHHHTCTTTCCEEEEEESCHHHHHHHHHHHHHTTCCCCEEE-ECCTTCHHHHHHHHHHHCCSEE
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCceEEEEEECCHHHHHHHHHHhhhhcCCceEEE-EecCCCHHHHHHHHHhhCCCEE
Confidence 6899999997777788888877333 444443321100000 011222 4677888888888888789999
Q ss_pred EECCChhhHHHHHHHHHHCCCCeeC-CcHHHHHH----hcCHHHHHHHHHHcCCCC
Q 010065 152 VVGPEAPLVSGLANKLVKAGIPTFG-PSSEAAAL----EGSKNFMKNLCDKYGIPT 202 (519)
Q Consensus 152 i~g~E~~~~~~~a~~le~~gip~~g-~~~~~~~~----~~dK~~~k~~l~~~Gi~~ 202 (519)
+...-...-..+.+.+.+.|++++- .+...... ...-..+.+.+++.|+..
T Consensus 81 in~ag~~~~~~v~~a~l~~g~~vvD~a~~~~~~~~~~~~~~~~~l~~~a~~aG~~~ 136 (405)
T 4ina_A 81 LNIALPYQDLTIMEACLRTGVPYLDTANYEHPDLAKFEYKEQWAFHDRYKEKGVMA 136 (405)
T ss_dssp EECSCGGGHHHHHHHHHHHTCCEEESSCCBCTTCSCBCSHHHHTTHHHHHHHTCEE
T ss_pred EECCCcccChHHHHHHHHhCCCEEEecCCCCcccchhhhHHHHHHHHHHHHhCCEE
Confidence 9842222223455666678988872 11111000 000124566777888764
No 95
>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}
Probab=85.97 E-value=0.83 Score=41.47 Aligned_cols=67 Identities=10% Similarity=0.175 Sum_probs=44.3
Q ss_pred cEEEEEeCCh-hHHHHHHHHHhcCCCcEEEEecCCCCCcCCCCCccccCCCCCC-HHHHHHHHHHcCCcEEEE
Q 010065 83 VVVLVIGGGG-REHALCYALKRSHSCDAVFCAPGNAGISNSGDATCIPDLDVLD-GDAVISFCRKWSVGLVVV 153 (519)
Q Consensus 83 ~~vliiG~g~-~~~~l~~~l~~~~g~~~v~~~~~~~~~~~~~~~~~v~~~d~~d-~~~l~~~~~~~~id~Vi~ 153 (519)
|+|+|+|+++ ....++..|.+. |++++.++.+............+ ..|..| .+.+.+.++ ++|.||.
T Consensus 1 M~ilItGatG~iG~~l~~~L~~~-g~~V~~~~R~~~~~~~~~~~~~~-~~D~~d~~~~~~~~~~--~~d~vi~ 69 (219)
T 3dqp_A 1 MKIFIVGSTGRVGKSLLKSLSTT-DYQIYAGARKVEQVPQYNNVKAV-HFDVDWTPEEMAKQLH--GMDAIIN 69 (219)
T ss_dssp CEEEEESTTSHHHHHHHHHHTTS-SCEEEEEESSGGGSCCCTTEEEE-ECCTTSCHHHHHTTTT--TCSEEEE
T ss_pred CeEEEECCCCHHHHHHHHHHHHC-CCEEEEEECCccchhhcCCceEE-EecccCCHHHHHHHHc--CCCEEEE
Confidence 5899999654 556788888877 88888776442211111222233 578888 888777664 6899997
No 96
>3keo_A Redox-sensing transcriptional repressor REX; DNA binding protein, winged helix, rossmann fold, NAD+; HET: NAD; 1.50A {Streptococcus agalactiae serogroup iiiorganism_taxid} PDB: 3keq_A* 3ket_A*
Probab=84.57 E-value=1 Score=41.06 Aligned_cols=92 Identities=15% Similarity=0.136 Sum_probs=53.1
Q ss_pred CccEEEEEeCChhHHHHHHHHH-hcCCCcEEEEecCCCC-CcCCCCCccccCCCCCCHHHHHHHHHHcCCcEEEECCChh
Q 010065 81 QRVVVLVIGGGGREHALCYALK-RSHSCDAVFCAPGNAG-ISNSGDATCIPDLDVLDGDAVISFCRKWSVGLVVVGPEAP 158 (519)
Q Consensus 81 ~~~~vliiG~g~~~~~l~~~l~-~~~g~~~v~~~~~~~~-~~~~~~~~~v~~~d~~d~~~l~~~~~~~~id~Vi~g~E~~ 158 (519)
++.+|+|+|+|....+++..+. +..|++.+.+-+.|+. ........-++..+ .+++.++++++++|.++...-..
T Consensus 83 ~~~~V~IvGaG~lG~aLa~~~~~~~~g~~iVg~~D~dp~~kiG~~~i~GvpV~~---~~dL~~~v~~~~Id~vIIAvPs~ 159 (212)
T 3keo_A 83 STTNVMLVGCGNIGRALLHYRFHDRNKMQISMAFDLDSNDLVGKTTEDGIPVYG---ISTINDHLIDSDIETAILTVPST 159 (212)
T ss_dssp SCEEEEEECCSHHHHHHTTCCCCTTSSEEEEEEEECTTSTTTTCBCTTCCBEEE---GGGHHHHC-CCSCCEEEECSCGG
T ss_pred CCCEEEEECcCHHHHHHHHhhhcccCCeEEEEEEeCCchhccCceeECCeEEeC---HHHHHHHHHHcCCCEEEEecCch
Confidence 4579999999965444444421 1236666655444443 22110011121112 35677778888999999854333
Q ss_pred hHHHHHHHHHHCCCCee
Q 010065 159 LVSGLANKLVKAGIPTF 175 (519)
Q Consensus 159 ~~~~~a~~le~~gip~~ 175 (519)
..+.+++.+.+.|++-+
T Consensus 160 ~aq~v~d~lv~~GIk~I 176 (212)
T 3keo_A 160 EAQEVADILVKAGIKGI 176 (212)
T ss_dssp GHHHHHHHHHHHTCCEE
T ss_pred hHHHHHHHHHHcCCCEE
Confidence 44678888999998854
No 97
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=84.40 E-value=1.5 Score=36.68 Aligned_cols=87 Identities=15% Similarity=0.096 Sum_probs=50.1
Q ss_pred ccEEEEEeCChhHHHHHHHHHhcCCCcEEEEecCCCCCcCC--CCCccccCCCCCCHHHHHHHHHHcCCcEEEEC-CChh
Q 010065 82 RVVVLVIGGGGREHALCYALKRSHSCDAVFCAPGNAGISNS--GDATCIPDLDVLDGDAVISFCRKWSVGLVVVG-PEAP 158 (519)
Q Consensus 82 ~~~vliiG~g~~~~~l~~~l~~~~g~~~v~~~~~~~~~~~~--~~~~~v~~~d~~d~~~l~~~~~~~~id~Vi~g-~E~~ 158 (519)
+++++|+|.|.....++..|.+. |++++.++.+....... .....+ ..|..+.+.+.+. .-.+.|.|+.. +.+.
T Consensus 6 ~~~v~I~G~G~iG~~la~~L~~~-g~~V~~id~~~~~~~~~~~~~~~~~-~gd~~~~~~l~~~-~~~~~d~vi~~~~~~~ 82 (141)
T 3llv_A 6 RYEYIVIGSEAAGVGLVRELTAA-GKKVLAVDKSKEKIELLEDEGFDAV-IADPTDESFYRSL-DLEGVSAVLITGSDDE 82 (141)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHT-TCCEEEEESCHHHHHHHHHTTCEEE-ECCTTCHHHHHHS-CCTTCSEEEECCSCHH
T ss_pred CCEEEEECCCHHHHHHHHHHHHC-CCeEEEEECCHHHHHHHHHCCCcEE-ECCCCCHHHHHhC-CcccCCEEEEecCCHH
Confidence 46899999997777788998877 89998886542111000 011122 4567776655432 22367888873 3333
Q ss_pred hHHHHHHHHHHCC
Q 010065 159 LVSGLANKLVKAG 171 (519)
Q Consensus 159 ~~~~~a~~le~~g 171 (519)
....+...+..++
T Consensus 83 ~n~~~~~~a~~~~ 95 (141)
T 3llv_A 83 FNLKILKALRSVS 95 (141)
T ss_dssp HHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHhC
Confidence 3223344455555
No 98
>2io8_A Bifunctional glutathionylspermidine synthetase/amidase; ligase, hydrolase; HET: ADP; 2.10A {Escherichia coli} SCOP: c.30.1.7 d.3.1.15 d.142.1.8 PDB: 2io7_A* 2io9_A* 2ioa_A* 2iob_A 3o98_A*
Probab=83.92 E-value=1.1 Score=47.76 Aligned_cols=113 Identities=16% Similarity=0.157 Sum_probs=67.0
Q ss_pred HHHHHHHCCCCeeCCcHHHHHHhcCHHHHHHHHHHcCCCCC---CeeecCCHHHHHHHHHHhCCCEEEEeCCCCCCCcEE
Q 010065 163 LANKLVKAGIPTFGPSSEAAALEGSKNFMKNLCDKYGIPTA---KYKTFTDPNAAKQYIQEEGAPIVVKADGLAAGKGVI 239 (519)
Q Consensus 163 ~a~~le~~gip~~g~~~~~~~~~~dK~~~k~~l~~~Gi~~p---~~~~v~~~~~~~~~~~~~g~P~VvKP~~g~gs~GV~ 239 (519)
+.+.++..+++++.| +.+ .+..||..+.-+.+.+- ..| ++..-.+. ++ .. -.+|+||..|..|.||.
T Consensus 475 ll~~l~~~~v~iieP-~~~-~llsNKailalLw~l~p-~hp~LLpT~f~~~~-~l----~~--~~yV~KPi~gReG~nV~ 544 (619)
T 2io8_A 475 LIDVLLRPEVLVFEP-LWT-VIPGNKAILPILWSLFP-HHRYLLDTDFTVND-EL----VK--TGYAVKPIAGRCGSNID 544 (619)
T ss_dssp HHHHHTCTTCEEESC-GGG-GTTTSTTHHHHHHHHST-TCTTCCCEESSCCH-HH----HH--HCEEEEETTCCTTTTCE
T ss_pred HHHHHHhCCCEEECH-HHH-HHhhhHHHHHHHHHhCC-CCCCCCCeeecCCc-cc----cc--CCEEEccCCCCCCCCEE
Confidence 445577778999844 443 34899999987777541 134 54433332 22 11 15999999999999999
Q ss_pred EeCCHHHHHHHHHHHHhhccCCCCCCcEEEEeccCCcE-----EEEEEEEeCCeeEEe
Q 010065 240 VAMTLEEAYEAVDSMLLKNAFGSAGCRVIIEEFLEGEE-----ASFFALVDGENAIPL 292 (519)
Q Consensus 240 ~v~~~~el~~a~~~~~~~~~~~~~~~~~lvEe~I~G~E-----~sv~~l~dg~~~~~~ 292 (519)
+++..++. ++. ....| .+..+|.|+|++=+. +.+.++.-|+....+
T Consensus 545 i~~~~~~~---~~~--~~~~y--~~~~~IyQe~~~lp~~d~~~~~iG~f~vgg~~aG~ 595 (619)
T 2io8_A 545 LVSHHEEV---LDK--TSGKF--AEQKNIYQQLWCLPKVDGKYIQVCTFTVGGNYGGT 595 (619)
T ss_dssp EECTTSCE---EEE--CCCTT--TTSCEEEEECCCCCEETTEEEEEEEEEETTEEEEE
T ss_pred EEeCCChh---Hhh--ccccc--cCCCeEEEEecCCCCcCCcceEEEEEEECCEEEEE
Confidence 99752211 000 01112 236789999998433 336666534434433
No 99
>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*
Probab=83.43 E-value=2.8 Score=37.01 Aligned_cols=67 Identities=13% Similarity=0.138 Sum_probs=44.0
Q ss_pred cEEEEEeC-ChhHHHHHHHHHhcCCCcEEEEecCCCCCcC--CCCCccccCCCCCCHHHHHHHHHHcCCcEEEE
Q 010065 83 VVVLVIGG-GGREHALCYALKRSHSCDAVFCAPGNAGISN--SGDATCIPDLDVLDGDAVISFCRKWSVGLVVV 153 (519)
Q Consensus 83 ~~vliiG~-g~~~~~l~~~l~~~~g~~~v~~~~~~~~~~~--~~~~~~v~~~d~~d~~~l~~~~~~~~id~Vi~ 153 (519)
|+|+|+|+ |+....+++.|.+. |++++.++.+...... ......+ ..|..|.+.+.+..+ ++|.||.
T Consensus 4 ~~ilVtGatG~iG~~l~~~l~~~-g~~V~~~~r~~~~~~~~~~~~~~~~-~~D~~~~~~~~~~~~--~~d~vi~ 73 (206)
T 1hdo_A 4 KKIAIFGATGQTGLTTLAQAVQA-GYEVTVLVRDSSRLPSEGPRPAHVV-VGDVLQAADVDKTVA--GQDAVIV 73 (206)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHT-TCEEEEEESCGGGSCSSSCCCSEEE-ESCTTSHHHHHHHHT--TCSEEEE
T ss_pred CEEEEEcCCcHHHHHHHHHHHHC-CCeEEEEEeChhhcccccCCceEEE-EecCCCHHHHHHHHc--CCCEEEE
Confidence 68999998 44566788888877 8888777643221111 1112223 568888888877664 5898987
No 100
>2yy7_A L-threonine dehydrogenase; thermolabIle, flavobacterium FRIG KUC-1, oxidoreductase; HET: PE8 NAD MES; 2.06A {Flavobacterium frigidimaris}
Probab=83.28 E-value=1.9 Score=41.27 Aligned_cols=70 Identities=10% Similarity=0.096 Sum_probs=45.9
Q ss_pred cEEEEEeCC-hhHHHHHHHHHhc-CCCcEEEEecCCCCCcCCCCCccccCCCCCCHHHHHHHHHHcCCcEEEE
Q 010065 83 VVVLVIGGG-GREHALCYALKRS-HSCDAVFCAPGNAGISNSGDATCIPDLDVLDGDAVISFCRKWSVGLVVV 153 (519)
Q Consensus 83 ~~vliiG~g-~~~~~l~~~l~~~-~g~~~v~~~~~~~~~~~~~~~~~v~~~d~~d~~~l~~~~~~~~id~Vi~ 153 (519)
++|||+|+. .....++..|.+. .|++++.++..............+ ..|..|.+.+.+++++.++|+||-
T Consensus 3 ~~vlVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~~~~~~-~~D~~d~~~~~~~~~~~~~d~vih 74 (312)
T 2yy7_A 3 PKILIIGACGQIGTELTQKLRKLYGTENVIASDIRKLNTDVVNSGPFE-VVNALDFNQIEHLVEVHKITDIYL 74 (312)
T ss_dssp CCEEEETTTSHHHHHHHHHHHHHHCGGGEEEEESCCCSCHHHHSSCEE-ECCTTCHHHHHHHHHHTTCCEEEE
T ss_pred ceEEEECCccHHHHHHHHHHHHhCCCCEEEEEcCCCccccccCCCceE-EecCCCHHHHHHHHhhcCCCEEEE
Confidence 689999985 4456677877765 367887775432211100111223 568888888888888778999997
No 101
>2z1m_A GDP-D-mannose dehydratase; short-chain dehydrogenase/reductase, lyase, structural genom NPPSFA; HET: NDP GDP; 2.00A {Aquifex aeolicus} PDB: 2z95_A*
Probab=83.08 E-value=3.9 Score=39.50 Aligned_cols=70 Identities=16% Similarity=0.084 Sum_probs=47.0
Q ss_pred ccEEEEEeCC-hhHHHHHHHHHhcCCCcEEEEecCCCCCc--C---C---CCCccccCCCCCCHHHHHHHHHHcCCcEEE
Q 010065 82 RVVVLVIGGG-GREHALCYALKRSHSCDAVFCAPGNAGIS--N---S---GDATCIPDLDVLDGDAVISFCRKWSVGLVV 152 (519)
Q Consensus 82 ~~~vliiG~g-~~~~~l~~~l~~~~g~~~v~~~~~~~~~~--~---~---~~~~~v~~~d~~d~~~l~~~~~~~~id~Vi 152 (519)
.++|||+|+. +....++..|.+. |++++.++....... . . .....+ ..|..|.+.+.++++..++|.||
T Consensus 3 ~~~vlVtGatG~iG~~l~~~L~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~-~~Dl~d~~~~~~~~~~~~~d~vi 80 (345)
T 2z1m_A 3 GKRALITGIRGQDGAYLAKLLLEK-GYEVYGADRRSGEFASWRLKELGIENDVKII-HMDLLEFSNIIRTIEKVQPDEVY 80 (345)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHT-TCEEEEECSCCSTTTTHHHHHTTCTTTEEEC-CCCTTCHHHHHHHHHHHCCSEEE
T ss_pred CCEEEEECCCChHHHHHHHHHHHC-CCEEEEEECCCcccccccHhhccccCceeEE-ECCCCCHHHHHHHHHhcCCCEEE
Confidence 4789999975 4566788888877 888877754322110 0 0 011223 56888888888888777899999
Q ss_pred E
Q 010065 153 V 153 (519)
Q Consensus 153 ~ 153 (519)
-
T Consensus 81 h 81 (345)
T 2z1m_A 81 N 81 (345)
T ss_dssp E
T ss_pred E
Confidence 7
No 102
>2ph5_A Homospermidine synthase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: NAD; 2.50A {Legionella pneumophila subsp}
Probab=82.84 E-value=1.6 Score=44.92 Aligned_cols=93 Identities=11% Similarity=0.037 Sum_probs=58.5
Q ss_pred ccEEEEEeCChhHHHHHHHHHhcCCC---cEEEEecCCCCCcCC---C-CCccccCCCCCCHHHHHH-HHHHcCCcEEEE
Q 010065 82 RVVVLVIGGGGREHALCYALKRSHSC---DAVFCAPGNAGISNS---G-DATCIPDLDVLDGDAVIS-FCRKWSVGLVVV 153 (519)
Q Consensus 82 ~~~vliiG~g~~~~~l~~~l~~~~g~---~~v~~~~~~~~~~~~---~-~~~~v~~~d~~d~~~l~~-~~~~~~id~Vi~ 153 (519)
+++|+|||.|+....++..+.+..++ +++++++...+.... . ..... .+|.++.+++++ ++++ + |+|+.
T Consensus 13 ~~rVlIIGaGgVG~~va~lla~~~dv~~~~I~vaD~~~~~~~~~~~~g~~~~~~-~Vdadnv~~~l~aLl~~-~-DvVIN 89 (480)
T 2ph5_A 13 KNRFVILGFGCVGQALMPLIFEKFDIKPSQVTIIAAEGTKVDVAQQYGVSFKLQ-QITPQNYLEVIGSTLEE-N-DFLID 89 (480)
T ss_dssp CSCEEEECCSHHHHHHHHHHHHHBCCCGGGEEEEESSCCSCCHHHHHTCEEEEC-CCCTTTHHHHTGGGCCT-T-CEEEE
T ss_pred CCCEEEECcCHHHHHHHHHHHhCCCCceeEEEEeccchhhhhHHhhcCCceeEE-eccchhHHHHHHHHhcC-C-CEEEE
Confidence 57899999998877788888877666 466666554332111 0 01111 466677766553 5543 4 99998
Q ss_pred CCChhhHHHHHHHHHHCCCCeeCC
Q 010065 154 GPEAPLVSGLANKLVKAGIPTFGP 177 (519)
Q Consensus 154 g~E~~~~~~~a~~le~~gip~~g~ 177 (519)
.+-....-.+.+.+.+.|+.|+-.
T Consensus 90 ~s~~~~~l~Im~acleaGv~YlDT 113 (480)
T 2ph5_A 90 VSIGISSLALIILCNQKGALYINA 113 (480)
T ss_dssp CCSSSCHHHHHHHHHHHTCEEEES
T ss_pred CCccccCHHHHHHHHHcCCCEEEC
Confidence 543333335677788889998743
No 103
>3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD binding; 2.30A {Thermoplasma volcanium}
Probab=82.68 E-value=3.3 Score=38.95 Aligned_cols=69 Identities=23% Similarity=0.254 Sum_probs=46.0
Q ss_pred CccEEEEEeCC-hhHHHHHHHHHhcCCCcEEEEecCCCCCcCCCCCccccCCCCCCHHHHHHHHHHc-----CCcEEEE
Q 010065 81 QRVVVLVIGGG-GREHALCYALKRSHSCDAVFCAPGNAGISNSGDATCIPDLDVLDGDAVISFCRKW-----SVGLVVV 153 (519)
Q Consensus 81 ~~~~vliiG~g-~~~~~l~~~l~~~~g~~~v~~~~~~~~~~~~~~~~~v~~~d~~d~~~l~~~~~~~-----~id~Vi~ 153 (519)
+.+++||+|++ +....++..|.+. |.+++.++.+...... ....+ ..|..|.+.+.+++++. ++|+++.
T Consensus 13 ~~k~vlVTGas~GIG~aia~~l~~~-G~~V~~~~r~~~~~~~--~~~~~-~~Dv~~~~~v~~~~~~~~~~~g~iD~lv~ 87 (269)
T 3vtz_A 13 TDKVAIVTGGSSGIGLAVVDALVRY-GAKVVSVSLDEKSDVN--VSDHF-KIDVTNEEEVKEAVEKTTKKYGRIDILVN 87 (269)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHT-TCEEEEEESCC--CTT--SSEEE-ECCTTCHHHHHHHHHHHHHHHSCCCEEEE
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHC-CCEEEEEeCCchhccC--ceeEE-EecCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence 45789999976 4566788898887 8988877644221111 12233 57888877777666543 7999997
No 104
>1rkx_A CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; 1.80A {Yersinia pseudotuberculosis} SCOP: c.2.1.2 PDB: 1wvg_A*
Probab=82.59 E-value=4.1 Score=39.80 Aligned_cols=70 Identities=13% Similarity=0.057 Sum_probs=47.3
Q ss_pred ccEEEEEeCC-hhHHHHHHHHHhcCCCcEEEEecCCCCCcC-------CCCCccccCCCCCCHHHHHHHHHHcCCcEEEE
Q 010065 82 RVVVLVIGGG-GREHALCYALKRSHSCDAVFCAPGNAGISN-------SGDATCIPDLDVLDGDAVISFCRKWSVGLVVV 153 (519)
Q Consensus 82 ~~~vliiG~g-~~~~~l~~~l~~~~g~~~v~~~~~~~~~~~-------~~~~~~v~~~d~~d~~~l~~~~~~~~id~Vi~ 153 (519)
.++|||+|+. .....++..|.+. |++++.++........ ......+ ..|..|.+.+.++++..++|+||-
T Consensus 9 ~~~vlVtGatG~iG~~l~~~L~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~-~~Dl~d~~~~~~~~~~~~~d~vih 86 (357)
T 1rkx_A 9 GKRVFVTGHTGFKGGWLSLWLQTM-GATVKGYSLTAPTVPSLFETARVADGMQSE-IGDIRDQNKLLESIREFQPEIVFH 86 (357)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHT-TCEEEEEESSCSSSSCHHHHTTTTTTSEEE-ECCTTCHHHHHHHHHHHCCSEEEE
T ss_pred CCEEEEECCCchHHHHHHHHHHhC-CCeEEEEeCCCcccchhhHhhccCCceEEE-EccccCHHHHHHHHHhcCCCEEEE
Confidence 4789999965 4556788888877 8888777643221111 0111223 568888888888887778999997
No 105
>3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri}
Probab=82.46 E-value=5.3 Score=38.26 Aligned_cols=117 Identities=18% Similarity=0.209 Sum_probs=69.3
Q ss_pred ccEEEEEeC-ChhHHHHHHHHHhcCCCcEEEEecCC-CCC--cC--------CCCCccccCCCCCCHHHHHHHHHHcCCc
Q 010065 82 RVVVLVIGG-GGREHALCYALKRSHSCDAVFCAPGN-AGI--SN--------SGDATCIPDLDVLDGDAVISFCRKWSVG 149 (519)
Q Consensus 82 ~~~vliiG~-g~~~~~l~~~l~~~~g~~~v~~~~~~-~~~--~~--------~~~~~~v~~~d~~d~~~l~~~~~~~~id 149 (519)
+++|+|+|+ |.....++..|.+. |++++.++.+. ... .. ......+ ..|..|.+.+.+.++ ++|
T Consensus 4 ~~~ilVtGatG~iG~~l~~~L~~~-g~~V~~~~R~~~~~~~~~~~~~l~~~~~~~v~~v-~~D~~d~~~l~~a~~--~~d 79 (321)
T 3c1o_A 4 MEKIIIYGGTGYIGKFMVRASLSF-SHPTFIYARPLTPDSTPSSVQLREEFRSMGVTII-EGEMEEHEKMVSVLK--QVD 79 (321)
T ss_dssp CCCEEEETTTSTTHHHHHHHHHHT-TCCEEEEECCCCTTCCHHHHHHHHHHHHTTCEEE-ECCTTCHHHHHHHHT--TCS
T ss_pred ccEEEEEcCCchhHHHHHHHHHhC-CCcEEEEECCcccccChHHHHHHHHhhcCCcEEE-EecCCCHHHHHHHHc--CCC
Confidence 578999997 44566788888877 88887775432 100 00 0112223 578888888877775 589
Q ss_pred EEEEC-CC--hhhHHHHHHHHHHCC-CCe-e----CCcH-------HHHHHhcCHHHHHHHHHHcCCCC
Q 010065 150 LVVVG-PE--APLVSGLANKLVKAG-IPT-F----GPSS-------EAAALEGSKNFMKNLCDKYGIPT 202 (519)
Q Consensus 150 ~Vi~g-~E--~~~~~~~a~~le~~g-ip~-~----g~~~-------~~~~~~~dK~~~k~~l~~~Gi~~ 202 (519)
.||.. +. ......+.+.+.+.| ++- + |.+. ........|....+++++.|++.
T Consensus 80 ~vi~~a~~~~~~~~~~l~~aa~~~g~v~~~v~S~~g~~~~~~~~~~p~~~~y~sK~~~e~~~~~~~~~~ 148 (321)
T 3c1o_A 80 IVISALPFPMISSQIHIINAIKAAGNIKRFLPSDFGCEEDRIKPLPPFESVLEKKRIIRRAIEAAALPY 148 (321)
T ss_dssp EEEECCCGGGSGGGHHHHHHHHHHCCCCEEECSCCSSCGGGCCCCHHHHHHHHHHHHHHHHHHHHTCCB
T ss_pred EEEECCCccchhhHHHHHHHHHHhCCccEEeccccccCccccccCCCcchHHHHHHHHHHHHHHcCCCe
Confidence 99973 21 112235566666667 642 2 2110 00112266888888888888764
No 106
>4b79_A PA4098, probable short-chain dehydrogenase; oxidoreductase, infectious disease, structure-based inhibito; HET: NAD; 1.98A {Pseudomonas aeruginosa PAO1}
Probab=82.45 E-value=7 Score=36.33 Aligned_cols=73 Identities=18% Similarity=0.236 Sum_probs=50.2
Q ss_pred CCCccEEEEEeCC-hhHHHHHHHHHhcCCCcEEEEecCCCCCcCCC--CCccccCCCCCCHHHHHHHHHHc-CCcEEEE
Q 010065 79 AGQRVVVLVIGGG-GREHALCYALKRSHSCDAVFCAPGNAGISNSG--DATCIPDLDVLDGDAVISFCRKW-SVGLVVV 153 (519)
Q Consensus 79 ~~~~~~vliiG~g-~~~~~l~~~l~~~~g~~~v~~~~~~~~~~~~~--~~~~v~~~d~~d~~~l~~~~~~~-~id~Vi~ 153 (519)
.++.|.++|.|++ +...+++..|.++ |.++++++.+........ ....+ ..|..|.+.+.++.++. ++|.++.
T Consensus 8 lf~GK~alVTGas~GIG~aia~~la~~-Ga~Vv~~~~~~~~~~~~~~~~~~~~-~~Dv~~~~~v~~~~~~~g~iDiLVN 84 (242)
T 4b79_A 8 IYAGQQVLVTGGSSGIGAAIAMQFAEL-GAEVVALGLDADGVHAPRHPRIRRE-ELDITDSQRLQRLFEALPRLDVLVN 84 (242)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHT-TCEEEEEESSTTSTTSCCCTTEEEE-ECCTTCHHHHHHHHHHCSCCSEEEE
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHC-CCEEEEEeCCHHHHhhhhcCCeEEE-EecCCCHHHHHHHHHhcCCCCEEEE
Confidence 3456889999976 4557789999888 999888765432222111 11222 57888888888888775 5899887
No 107
>2c20_A UDP-glucose 4-epimerase; carbohydrate metabolism, galactose metabolism, isomerase, NAD, spine; HET: NAD; 2.7A {Bacillus anthracis}
Probab=82.20 E-value=3.3 Score=39.87 Aligned_cols=70 Identities=14% Similarity=0.069 Sum_probs=46.2
Q ss_pred ccEEEEEeCC-hhHHHHHHHHHhcCCCcEEEEecCCCCC-cCCC-CCccccCCCCCCHHHHHHHHHHcCCcEEEE
Q 010065 82 RVVVLVIGGG-GREHALCYALKRSHSCDAVFCAPGNAGI-SNSG-DATCIPDLDVLDGDAVISFCRKWSVGLVVV 153 (519)
Q Consensus 82 ~~~vliiG~g-~~~~~l~~~l~~~~g~~~v~~~~~~~~~-~~~~-~~~~v~~~d~~d~~~l~~~~~~~~id~Vi~ 153 (519)
+|+|+|+|+. .....++..|.+. |++++.++...... .... ....+ ..|..|.+.+.+++++.++|.||-
T Consensus 1 M~~ilVtGatG~iG~~l~~~L~~~-g~~V~~~~r~~~~~~~~~~~~~~~~-~~D~~~~~~~~~~~~~~~~d~vih 73 (330)
T 2c20_A 1 MNSILICGGAGYIGSHAVKKLVDE-GLSVVVVDNLQTGHEDAITEGAKFY-NGDLRDKAFLRDVFTQENIEAVMH 73 (330)
T ss_dssp -CEEEEETTTSHHHHHHHHHHHHT-TCEEEEEECCSSCCGGGSCTTSEEE-ECCTTCHHHHHHHHHHSCEEEEEE
T ss_pred CCEEEEECCCcHHHHHHHHHHHhC-CCEEEEEeCCCcCchhhcCCCcEEE-ECCCCCHHHHHHHHhhcCCCEEEE
Confidence 3689999975 4556788888877 88887775432111 1111 12223 568888888888887778999997
No 108
>2duw_A Putative COA-binding protein; ligand binding protein; NMR {Klebsiella pneumoniae}
Probab=81.90 E-value=7.9 Score=32.71 Aligned_cols=34 Identities=9% Similarity=0.111 Sum_probs=24.5
Q ss_pred ccEEEEEeCC----hhHHHHHHHHHhcCCCcEEEEecCC
Q 010065 82 RVVVLVIGGG----GREHALCYALKRSHSCDAVFCAPGN 116 (519)
Q Consensus 82 ~~~vliiG~g----~~~~~l~~~l~~~~g~~~v~~~~~~ 116 (519)
.++|.|+|.+ .....+++.|.+. |++++.++|..
T Consensus 13 p~~IavIGas~~~g~~G~~~~~~L~~~-G~~v~~vnp~~ 50 (145)
T 2duw_A 13 TRTIALVGASDKPDRPSYRVMKYLLDQ-GYHVIPVSPKV 50 (145)
T ss_dssp CCCEEEESCCSCTTSHHHHHHHHHHHH-TCCEEEECSSS
T ss_pred CCEEEEECcCCCCCChHHHHHHHHHHC-CCEEEEeCCcc
Confidence 5679999984 3455677778776 88877776654
No 109
>3o9z_A Lipopolysaccaride biosynthesis protein WBPB; oxidoreductase, sugar biosynthesis, dehydrogenase; HET: NAD AKG; 1.45A {Thermus thermophilus} PDB: 3oa0_A*
Probab=81.78 E-value=3.3 Score=40.08 Aligned_cols=117 Identities=12% Similarity=0.049 Sum_probs=63.2
Q ss_pred ccEEEEEeCCh-hHHHHHHHHHhcCCCcEEEEecCCCCCcCCCCCccccCC-CCCCHHHHHHHH-----HHcCCcEEEEC
Q 010065 82 RVVVLVIGGGG-REHALCYALKRSHSCDAVFCAPGNAGISNSGDATCIPDL-DVLDGDAVISFC-----RKWSVGLVVVG 154 (519)
Q Consensus 82 ~~~vliiG~g~-~~~~l~~~l~~~~g~~~v~~~~~~~~~~~~~~~~~v~~~-d~~d~~~l~~~~-----~~~~id~Vi~g 154 (519)
+++|.|||.|+ .....+..+++. +.+.+.+.+.+....... ...... -..+.+++++.+ ...++|+|+..
T Consensus 3 mirvgiIG~gG~i~~~h~~~l~~~-~~~lvav~d~~~~~~~~~--~~~~~~~~~~~~~~ll~~~~~l~~~~~~vD~V~I~ 79 (312)
T 3o9z_A 3 MTRFALTGLAGYIAPRHLKAIKEV-GGVLVASLDPATNVGLVD--SFFPEAEFFTEPEAFEAYLEDLRDRGEGVDYLSIA 79 (312)
T ss_dssp CCEEEEECTTSSSHHHHHHHHHHT-TCEEEEEECSSCCCGGGG--GTCTTCEEESCHHHHHHHHHHHHHTTCCCSEEEEC
T ss_pred ceEEEEECCChHHHHHHHHHHHhC-CCEEEEEEcCCHHHHHHH--hhCCCCceeCCHHHHHHHhhhhcccCCCCcEEEEC
Confidence 57999999853 333456666665 777666654333221111 111001 124567776554 45679999986
Q ss_pred CChhhHHHHHHHHHHCCCCeeCCcHHHHHHhcCHHHHHHHHHHcCCCC
Q 010065 155 PEAPLVSGLANKLVKAGIPTFGPSSEAAALEGSKNFMKNLCDKYGIPT 202 (519)
Q Consensus 155 ~E~~~~~~~a~~le~~gip~~g~~~~~~~~~~dK~~~k~~l~~~Gi~~ 202 (519)
.-...-..++..+-+.|.+++.-.|-+... .+=..+.+++++.|+..
T Consensus 80 tP~~~H~~~~~~al~aGkhVl~EKPla~~~-~ea~~l~~~a~~~g~~~ 126 (312)
T 3o9z_A 80 SPNHLHYPQIRMALRLGANALSEKPLVLWP-EEIARLKELEARTGRRV 126 (312)
T ss_dssp SCGGGHHHHHHHHHHTTCEEEECSSSCSCH-HHHHHHHHHHHHHCCCE
T ss_pred CCchhhHHHHHHHHHCCCeEEEECCCCCCH-HHHHHHHHHHHHcCCEE
Confidence 544443345555667798876433322211 11223455667777754
No 110
>3uuw_A Putative oxidoreductase with NAD(P)-binding rossm domain; structural genomics, center for structural genomics of infec diseases, csgid; HET: 1PE PGE; 1.63A {Clostridium difficile}
Probab=81.68 E-value=1 Score=43.56 Aligned_cols=114 Identities=11% Similarity=0.058 Sum_probs=61.3
Q ss_pred CccEEEEEeCChhHHH-HHHHHHhcCCCcEEEEecCCCCCc-CCCCCccccCCCCCCHHHHHHHHHHcCCcEEEECCChh
Q 010065 81 QRVVVLVIGGGGREHA-LCYALKRSHSCDAVFCAPGNAGIS-NSGDATCIPDLDVLDGDAVISFCRKWSVGLVVVGPEAP 158 (519)
Q Consensus 81 ~~~~vliiG~g~~~~~-l~~~l~~~~g~~~v~~~~~~~~~~-~~~~~~~v~~~d~~d~~~l~~~~~~~~id~Vi~g~E~~ 158 (519)
++++|.|||.|..... .+..+.+..+++.+.+.+.++... .......+ .. ..+.+++++ ++|+|+...-..
T Consensus 5 ~~~~igiIG~G~~g~~~~~~~l~~~~~~~l~av~d~~~~~~~~~a~~~~~-~~-~~~~~~ll~-----~~D~V~i~tp~~ 77 (308)
T 3uuw_A 5 KNIKMGMIGLGSIAQKAYLPILTKSERFEFVGAFTPNKVKREKICSDYRI-MP-FDSIESLAK-----KCDCIFLHSSTE 77 (308)
T ss_dssp CCCEEEEECCSHHHHHHTHHHHTSCSSSEEEEEECSCHHHHHHHHHHHTC-CB-CSCHHHHHT-----TCSEEEECCCGG
T ss_pred ccCcEEEEecCHHHHHHHHHHHHhCCCeEEEEEECCCHHHHHHHHHHcCC-CC-cCCHHHHHh-----cCCEEEEeCCcH
Confidence 4579999999965543 566666655777775543322110 00000011 11 456666654 799999865444
Q ss_pred hHHHHHHHHHHCCCCeeCCcHHHHHHhcCHHHHHHHHHHcCCCC
Q 010065 159 LVSGLANKLVKAGIPTFGPSSEAAALEGSKNFMKNLCDKYGIPT 202 (519)
Q Consensus 159 ~~~~~a~~le~~gip~~g~~~~~~~~~~dK~~~k~~l~~~Gi~~ 202 (519)
.-..++..+-+.|.+++--.|-+... .+=..+.+.+++.|+..
T Consensus 78 ~h~~~~~~al~~gk~vl~EKP~~~~~-~~~~~l~~~a~~~g~~~ 120 (308)
T 3uuw_A 78 THYEIIKILLNLGVHVYVDKPLASTV-SQGEELIELSTKKNLNL 120 (308)
T ss_dssp GHHHHHHHHHHTTCEEEECSSSSSSH-HHHHHHHHHHHHHTCCE
T ss_pred hHHHHHHHHHHCCCcEEEcCCCCCCH-HHHHHHHHHHHHcCCEE
Confidence 43345555666788876432322211 11123445677777654
No 111
>2p5y_A UDP-glucose 4-epimerase; TTHA0591, structural genomics, PSI; HET: NAD; 1.92A {Thermus thermophilus HB8} PDB: 2p5u_A*
Probab=81.58 E-value=4.7 Score=38.48 Aligned_cols=69 Identities=19% Similarity=0.156 Sum_probs=45.6
Q ss_pred cEEEEEeCC-hhHHHHHHHHHhcCCCcEEEEecCCCCC-cCC-CCCccccCCCCCCHHHHHHHHHHcCCcEEEE
Q 010065 83 VVVLVIGGG-GREHALCYALKRSHSCDAVFCAPGNAGI-SNS-GDATCIPDLDVLDGDAVISFCRKWSVGLVVV 153 (519)
Q Consensus 83 ~~vliiG~g-~~~~~l~~~l~~~~g~~~v~~~~~~~~~-~~~-~~~~~v~~~d~~d~~~l~~~~~~~~id~Vi~ 153 (519)
|+|||+|+. +....++..|.+. |++++.++...... ... .....+ ..|..|.+.+.+.+++.++|.|+-
T Consensus 1 m~vlVTGatG~iG~~l~~~L~~~-G~~V~~~~r~~~~~~~~~~~~~~~~-~~Dl~~~~~~~~~~~~~~~d~vi~ 72 (311)
T 2p5y_A 1 MRVLVTGGAGFIGSHIVEDLLAR-GLEVAVLDNLATGKRENVPKGVPFF-RVDLRDKEGVERAFREFRPTHVSH 72 (311)
T ss_dssp CEEEEETTTSHHHHHHHHHHHTT-TCEEEEECCCSSCCGGGSCTTCCEE-CCCTTCHHHHHHHHHHHCCSEEEE
T ss_pred CEEEEEeCCcHHHHHHHHHHHHC-CCEEEEEECCCcCchhhcccCeEEE-ECCCCCHHHHHHHHHhcCCCEEEE
Confidence 579999975 4556788888876 88887775322111 111 111223 568888888888777678999987
No 112
>1rpn_A GDP-mannose 4,6-dehydratase; short-chain dehydrogenase/reductase, rossmann fold, lyase; HET: NDP GDP; 2.15A {Pseudomonas aeruginosa} SCOP: c.2.1.2
Probab=81.34 E-value=3.5 Score=39.76 Aligned_cols=71 Identities=20% Similarity=0.038 Sum_probs=46.6
Q ss_pred CccEEEEEeCCh-hHHHHHHHHHhcCCCcEEEEecCCCCCc-----C---CCCCccccCCCCCCHHHHHHHHHHcCCcEE
Q 010065 81 QRVVVLVIGGGG-REHALCYALKRSHSCDAVFCAPGNAGIS-----N---SGDATCIPDLDVLDGDAVISFCRKWSVGLV 151 (519)
Q Consensus 81 ~~~~vliiG~g~-~~~~l~~~l~~~~g~~~v~~~~~~~~~~-----~---~~~~~~v~~~d~~d~~~l~~~~~~~~id~V 151 (519)
.+++|||+|+.| ....++..|.+. |++++.++....... . ......+ ..|..|.+.+.++++..++|+|
T Consensus 13 ~~~~vlVTGatG~iG~~l~~~L~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~-~~Dl~d~~~~~~~~~~~~~d~V 90 (335)
T 1rpn_A 13 MTRSALVTGITGQDGAYLAKLLLEK-GYRVHGLVARRSSDTRWRLRELGIEGDIQYE-DGDMADACSVQRAVIKAQPQEV 90 (335)
T ss_dssp --CEEEEETTTSHHHHHHHHHHHHT-TCEEEEEECCCSSCCCHHHHHTTCGGGEEEE-ECCTTCHHHHHHHHHHHCCSEE
T ss_pred cCCeEEEECCCChHHHHHHHHHHHC-CCeEEEEeCCCccccccchhhccccCceEEE-ECCCCCHHHHHHHHHHcCCCEE
Confidence 358999999764 456688888877 888877764322110 0 0011222 5688888888888887789999
Q ss_pred EE
Q 010065 152 VV 153 (519)
Q Consensus 152 i~ 153 (519)
|-
T Consensus 91 ih 92 (335)
T 1rpn_A 91 YN 92 (335)
T ss_dssp EE
T ss_pred EE
Confidence 97
No 113
>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}
Probab=81.16 E-value=1.4 Score=41.77 Aligned_cols=67 Identities=15% Similarity=0.141 Sum_probs=43.7
Q ss_pred ccEEEEEeCChhHHHHHHHHHhcCCCcEEEEecCCCCCcCCCCCccccCCCCCCHHHHHHHHHHcCCcEEEE
Q 010065 82 RVVVLVIGGGGREHALCYALKRSHSCDAVFCAPGNAGISNSGDATCIPDLDVLDGDAVISFCRKWSVGLVVV 153 (519)
Q Consensus 82 ~~~vliiG~g~~~~~l~~~l~~~~g~~~v~~~~~~~~~~~~~~~~~v~~~d~~d~~~l~~~~~~~~id~Vi~ 153 (519)
+++|||+|+|.....++..|.+. |++++.++....... .....+ ..|..|.+.+.++.+ .++|.||-
T Consensus 3 ~~~ilVtGaG~iG~~l~~~L~~~-g~~V~~~~r~~~~~~--~~~~~~-~~Dl~d~~~~~~~~~-~~~d~vih 69 (286)
T 3gpi_A 3 LSKILIAGCGDLGLELARRLTAQ-GHEVTGLRRSAQPMP--AGVQTL-IADVTRPDTLASIVH-LRPEILVY 69 (286)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHT-TCCEEEEECTTSCCC--TTCCEE-ECCTTCGGGCTTGGG-GCCSEEEE
T ss_pred CCcEEEECCCHHHHHHHHHHHHC-CCEEEEEeCCccccc--cCCceE-EccCCChHHHHHhhc-CCCCEEEE
Confidence 47899999886677788888877 898888764422211 112223 456666665555443 35999986
No 114
>3d7l_A LIN1944 protein; APC89317, structural genomics, PS protein structure initiative, midwest center for structural genomics, MCSG; 2.06A {Listeria innocua}
Probab=81.12 E-value=3.2 Score=36.82 Aligned_cols=61 Identities=16% Similarity=0.290 Sum_probs=43.2
Q ss_pred CccEEEEEeCCh-hHHHHHHHHHhcCCCcEEEEecCCCCCcCCCCCccccCCCCCCHHHHHHHHHHc-CCcEEEE
Q 010065 81 QRVVVLVIGGGG-REHALCYALKRSHSCDAVFCAPGNAGISNSGDATCIPDLDVLDGDAVISFCRKW-SVGLVVV 153 (519)
Q Consensus 81 ~~~~vliiG~g~-~~~~l~~~l~~~~g~~~v~~~~~~~~~~~~~~~~~v~~~d~~d~~~l~~~~~~~-~id~Vi~ 153 (519)
+||+++|+|+++ ....++..|. . |++++.++.+.. .+ ..|..+.+.+.+++++. ++|.|+.
T Consensus 2 ~kM~vlVtGasg~iG~~~~~~l~-~-g~~V~~~~r~~~---------~~-~~D~~~~~~~~~~~~~~~~~d~vi~ 64 (202)
T 3d7l_A 2 NAMKILLIGASGTLGSAVKERLE-K-KAEVITAGRHSG---------DV-TVDITNIDSIKKMYEQVGKVDAIVS 64 (202)
T ss_dssp CSCEEEEETTTSHHHHHHHHHHT-T-TSEEEEEESSSS---------SE-ECCTTCHHHHHHHHHHHCCEEEEEE
T ss_pred CCcEEEEEcCCcHHHHHHHHHHH-C-CCeEEEEecCcc---------ce-eeecCCHHHHHHHHHHhCCCCEEEE
Confidence 356899999764 4567888888 6 888877653321 23 56778888887777664 6899987
No 115
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=80.83 E-value=8.6 Score=32.56 Aligned_cols=85 Identities=7% Similarity=-0.018 Sum_probs=47.2
Q ss_pred ccEEEEEeCChhHHHHHHHHHhcCCCcEEEEecCCCCCcCCC---CCccccCCCCCCHHHHHHHHHHcCCcEEEEC-CCh
Q 010065 82 RVVVLVIGGGGREHALCYALKRSHSCDAVFCAPGNAGISNSG---DATCIPDLDVLDGDAVISFCRKWSVGLVVVG-PEA 157 (519)
Q Consensus 82 ~~~vliiG~g~~~~~l~~~l~~~~g~~~v~~~~~~~~~~~~~---~~~~v~~~d~~d~~~l~~~~~~~~id~Vi~g-~E~ 157 (519)
.++|+|+|.|.....+++.|.+. |+++++++.+........ ....+ ..|..+.+.+.+. .-.+.|+|+.. +.+
T Consensus 19 ~~~v~IiG~G~iG~~la~~L~~~-g~~V~vid~~~~~~~~~~~~~g~~~~-~~d~~~~~~l~~~-~~~~ad~Vi~~~~~~ 95 (155)
T 2g1u_A 19 SKYIVIFGCGRLGSLIANLASSS-GHSVVVVDKNEYAFHRLNSEFSGFTV-VGDAAEFETLKEC-GMEKADMVFAFTNDD 95 (155)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT-TCEEEEEESCGGGGGGSCTTCCSEEE-ESCTTSHHHHHTT-TGGGCSEEEECSSCH
T ss_pred CCcEEEECCCHHHHHHHHHHHhC-CCeEEEEECCHHHHHHHHhcCCCcEE-EecCCCHHHHHHc-CcccCCEEEEEeCCc
Confidence 47899999997777788888776 888887765421111111 11112 2355555444322 12358888874 344
Q ss_pred hhHHHHHHHHHH
Q 010065 158 PLVSGLANKLVK 169 (519)
Q Consensus 158 ~~~~~~a~~le~ 169 (519)
.....+...+..
T Consensus 96 ~~~~~~~~~~~~ 107 (155)
T 2g1u_A 96 STNFFISMNARY 107 (155)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 333334444444
No 116
>1n7h_A GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR, short-chain dehydrogenase/reductase, LYA; HET: NDP GDP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1n7g_A*
Probab=80.80 E-value=4.7 Score=39.80 Aligned_cols=69 Identities=12% Similarity=-0.039 Sum_probs=46.0
Q ss_pred cEEEEEeCC-hhHHHHHHHHHhcCCCcEEEEecCCCC-----CcCCC---------CCccccCCCCCCHHHHHHHHHHcC
Q 010065 83 VVVLVIGGG-GREHALCYALKRSHSCDAVFCAPGNAG-----ISNSG---------DATCIPDLDVLDGDAVISFCRKWS 147 (519)
Q Consensus 83 ~~vliiG~g-~~~~~l~~~l~~~~g~~~v~~~~~~~~-----~~~~~---------~~~~v~~~d~~d~~~l~~~~~~~~ 147 (519)
++|||+|+. .....++..|.+. |++++.++..... ..... ....+ ..|..|.+.+.++++..+
T Consensus 29 k~vlVtGatG~IG~~l~~~L~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~Dl~d~~~~~~~~~~~~ 106 (381)
T 1n7h_A 29 KIALITGITGQDGSYLTEFLLGK-GYEVHGLIRRSSNFNTQRINHIYIDPHNVNKALMKLH-YADLTDASSLRRWIDVIK 106 (381)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHT-TCEEEEEECCCSSCCCTTTTTTC--------CCEEEE-ECCTTCHHHHHHHHHHHC
T ss_pred CeEEEEcCCchHHHHHHHHHHHC-CCEEEEEecCCccccchhhhhhhhccccccccceEEE-ECCCCCHHHHHHHHHhcC
Confidence 589999975 4556788888877 8888777643211 11100 11222 568888888888887778
Q ss_pred CcEEEE
Q 010065 148 VGLVVV 153 (519)
Q Consensus 148 id~Vi~ 153 (519)
+|+||-
T Consensus 107 ~d~Vih 112 (381)
T 1n7h_A 107 PDEVYN 112 (381)
T ss_dssp CSEEEE
T ss_pred CCEEEE
Confidence 999997
No 117
>3evn_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics; 2.00A {Streptococcus agalactiae serogroup V}
Probab=80.74 E-value=3.6 Score=40.02 Aligned_cols=144 Identities=10% Similarity=0.033 Sum_probs=73.1
Q ss_pred CccEEEEEeCChhHHHHHHHHHhcCCCcEEEEecCCCCC-cCCCCCccccCCCCCCHHHHHHHHHHcCCcEEEECCChhh
Q 010065 81 QRVVVLVIGGGGREHALCYALKRSHSCDAVFCAPGNAGI-SNSGDATCIPDLDVLDGDAVISFCRKWSVGLVVVGPEAPL 159 (519)
Q Consensus 81 ~~~~vliiG~g~~~~~l~~~l~~~~g~~~v~~~~~~~~~-~~~~~~~~v~~~d~~d~~~l~~~~~~~~id~Vi~g~E~~~ 159 (519)
++++|.|||.|......+..+++..+++++.+.+.++.. ........+ ..-..+.+++ +...++|+|+...-...
T Consensus 4 ~~~rigiiG~G~ig~~~~~~l~~~~~~~~~av~d~~~~~~~~~a~~~~~-~~~~~~~~~l---l~~~~~D~V~i~tp~~~ 79 (329)
T 3evn_A 4 SKVRYGVVSTAKVAPRFIEGVRLAGNGEVVAVSSRTLESAQAFANKYHL-PKAYDKLEDM---LADESIDVIYVATINQD 79 (329)
T ss_dssp -CEEEEEEBCCTTHHHHHHHHHHHCSEEEEEEECSCSSTTCC---CCCC-SCEESCHHHH---HTCTTCCEEEECSCGGG
T ss_pred CceEEEEEechHHHHHHHHHHHhCCCcEEEEEEcCCHHHHHHHHHHcCC-CcccCCHHHH---hcCCCCCEEEECCCcHH
Confidence 357999999996555566677666566666554333221 111110001 0012345554 44557999998644444
Q ss_pred HHHHHHHHHHCCCCeeCCcHHHHHHhcCHHHHHHHHHHcCCCCCCeee---cCCHHHHHHHHH--HhCCCEEEEe
Q 010065 160 VSGLANKLVKAGIPTFGPSSEAAALEGSKNFMKNLCDKYGIPTAKYKT---FTDPNAAKQYIQ--EEGAPIVVKA 229 (519)
Q Consensus 160 ~~~~a~~le~~gip~~g~~~~~~~~~~dK~~~k~~l~~~Gi~~p~~~~---v~~~~~~~~~~~--~~g~P~VvKP 229 (519)
-..++..+-+.|.+++.-.|-+... .+=..+.+++++.|+..-.... ......+.+.++ .+|-+..+.-
T Consensus 80 h~~~~~~al~aGk~Vl~EKP~a~~~-~e~~~l~~~a~~~~~~~~v~~~~r~~p~~~~~~~~i~~g~iG~i~~v~~ 153 (329)
T 3evn_A 80 HYKVAKAALLAGKHVLVEKPFTLTY-DQANELFALAESCNLFLMEAQKSVFIPMTQVIKKLLASGEIGEVISISS 153 (329)
T ss_dssp HHHHHHHHHHTTCEEEEESSCCSSH-HHHHHHHHHHHHTTCCEEEECSSCSSHHHHHHHHHHHTTTTCSEEEEEE
T ss_pred HHHHHHHHHHCCCeEEEccCCcCCH-HHHHHHHHHHHHcCCEEEEEEcccCCHHHHHHHHHHhCCCCCCeEEEEE
Confidence 3345555667788776322221111 1112355667788876422111 112234555555 4676666654
No 118
>2pk3_A GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, short-chain dehydrogenase/reductase, rossmann fold, oxidoreductase; HET: A2R GDD; 1.82A {Aneurinibacillus thermoaerophilus}
Probab=80.00 E-value=4.8 Score=38.48 Aligned_cols=68 Identities=16% Similarity=0.217 Sum_probs=46.6
Q ss_pred ccEEEEEeCCh-hHHHHHHHHHhcCCCcEEEEecCCCCCcCCCCCccccCCCCCCHHHHHHHHHHcCCcEEEE
Q 010065 82 RVVVLVIGGGG-REHALCYALKRSHSCDAVFCAPGNAGISNSGDATCIPDLDVLDGDAVISFCRKWSVGLVVV 153 (519)
Q Consensus 82 ~~~vliiG~g~-~~~~l~~~l~~~~g~~~v~~~~~~~~~~~~~~~~~v~~~d~~d~~~l~~~~~~~~id~Vi~ 153 (519)
.++|||+|+.| ....++..|.+. |++++.++..... ... ....+ ..|..|.+.+.++++..++|+||-
T Consensus 12 ~~~vlVTGatG~iG~~l~~~L~~~-G~~V~~~~r~~~~-~~l-~~~~~-~~Dl~d~~~~~~~~~~~~~d~vih 80 (321)
T 2pk3_A 12 SMRALITGVAGFVGKYLANHLTEQ-NVEVFGTSRNNEA-KLP-NVEMI-SLDIMDSQRVKKVISDIKPDYIFH 80 (321)
T ss_dssp -CEEEEETTTSHHHHHHHHHHHHT-TCEEEEEESCTTC-CCT-TEEEE-ECCTTCHHHHHHHHHHHCCSEEEE
T ss_pred cceEEEECCCChHHHHHHHHHHHC-CCEEEEEecCCcc-ccc-eeeEE-ECCCCCHHHHHHHHHhcCCCEEEE
Confidence 47899999764 456688888877 8888777643222 111 11223 568888888888887778999997
No 119
>2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa}
Probab=79.98 E-value=3.8 Score=39.63 Aligned_cols=68 Identities=19% Similarity=0.234 Sum_probs=44.3
Q ss_pred ccEEEEEeCC-hhHHHHHHHHHhcCCCcEEEEecCCCCCcCCC--CCccccCCCCCCHHHHHHHHHHcCCcEEEE
Q 010065 82 RVVVLVIGGG-GREHALCYALKRSHSCDAVFCAPGNAGISNSG--DATCIPDLDVLDGDAVISFCRKWSVGLVVV 153 (519)
Q Consensus 82 ~~~vliiG~g-~~~~~l~~~l~~~~g~~~v~~~~~~~~~~~~~--~~~~v~~~d~~d~~~l~~~~~~~~id~Vi~ 153 (519)
+|+|||+|+. .....++..|.+. |++++.++.......... ....+ ..|..|.+.+.++++ ++|.||-
T Consensus 13 ~M~ilVtGatG~iG~~l~~~L~~~-g~~V~~~~r~~~~~~~l~~~~~~~~-~~Dl~d~~~~~~~~~--~~d~vih 83 (342)
T 2x4g_A 13 HVKYAVLGATGLLGHHAARAIRAA-GHDLVLIHRPSSQIQRLAYLEPECR-VAEMLDHAGLERALR--GLDGVIF 83 (342)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHT-TCEEEEEECTTSCGGGGGGGCCEEE-ECCTTCHHHHHHHTT--TCSEEEE
T ss_pred CCEEEEECCCcHHHHHHHHHHHHC-CCEEEEEecChHhhhhhccCCeEEE-EecCCCHHHHHHHHc--CCCEEEE
Confidence 4699999975 4556788888877 888877764422211111 12223 568888888777664 5899986
No 120
>3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.45A {Sinorhizobium meliloti}
Probab=79.94 E-value=4.7 Score=37.68 Aligned_cols=69 Identities=16% Similarity=0.181 Sum_probs=45.8
Q ss_pred ccEEEEEeCC-hhHHHHHHHHHhcCCCcEEEEecCCCCCcCCCCCccccCCCCCCHHHHHHHHHHc-----CCcEEEE
Q 010065 82 RVVVLVIGGG-GREHALCYALKRSHSCDAVFCAPGNAGISNSGDATCIPDLDVLDGDAVISFCRKW-----SVGLVVV 153 (519)
Q Consensus 82 ~~~vliiG~g-~~~~~l~~~l~~~~g~~~v~~~~~~~~~~~~~~~~~v~~~d~~d~~~l~~~~~~~-----~id~Vi~ 153 (519)
.++++|+|++ +....++..|.+. |.+++.++.+...... .....+ ..|..|.+.+.+++++. ++|+++.
T Consensus 28 ~k~vlVTGas~gIG~aia~~l~~~-G~~V~~~~r~~~~~~~-~~~~~~-~~Dv~d~~~v~~~~~~~~~~~g~iD~lv~ 102 (260)
T 3un1_A 28 QKVVVITGASQGIGAGLVRAYRDR-NYRVVATSRSIKPSAD-PDIHTV-AGDISKPETADRIVREGIERFGRIDSLVN 102 (260)
T ss_dssp CCEEEESSCSSHHHHHHHHHHHHT-TCEEEEEESSCCCCSS-TTEEEE-ESCTTSHHHHHHHHHHHHHHHSCCCEEEE
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHC-CCEEEEEeCChhhccc-CceEEE-EccCCCHHHHHHHHHHHHHHCCCCCEEEE
Confidence 4688999866 4566788999887 9988877644221111 112223 56888877777666543 7999997
No 121
>2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A*
Probab=79.89 E-value=6.9 Score=38.67 Aligned_cols=69 Identities=10% Similarity=0.002 Sum_probs=45.2
Q ss_pred CccEEEEEeCC-hhHHHHHHHHHhcCCCcEEEEecCCCCCcCC--CCCccccCCCCCCHHHHHHHHHHcCCcEEEE
Q 010065 81 QRVVVLVIGGG-GREHALCYALKRSHSCDAVFCAPGNAGISNS--GDATCIPDLDVLDGDAVISFCRKWSVGLVVV 153 (519)
Q Consensus 81 ~~~~vliiG~g-~~~~~l~~~l~~~~g~~~v~~~~~~~~~~~~--~~~~~v~~~d~~d~~~l~~~~~~~~id~Vi~ 153 (519)
.+++|||+|+. .....++..|.+. |++++.++......... .....+ ..|..|.+.+.++++ ++|+||-
T Consensus 28 ~~~~vlVtGatG~iG~~l~~~L~~~-g~~V~~~~r~~~~~~~~~~~~v~~~-~~Dl~d~~~~~~~~~--~~d~Vih 99 (379)
T 2c5a_A 28 ENLKISITGAGGFIASHIARRLKHE-GHYVIASDWKKNEHMTEDMFCDEFH-LVDLRVMENCLKVTE--GVDHVFN 99 (379)
T ss_dssp SCCEEEEETTTSHHHHHHHHHHHHT-TCEEEEEESSCCSSSCGGGTCSEEE-ECCTTSHHHHHHHHT--TCSEEEE
T ss_pred cCCeEEEECCccHHHHHHHHHHHHC-CCeEEEEECCCccchhhccCCceEE-ECCCCCHHHHHHHhC--CCCEEEE
Confidence 35799999985 4556788888877 88887776442221111 112223 568888888777764 7899987
No 122
>3rjz_A N-type ATP pyrophosphatase superfamily; structural genomics, PSI-biology, northeast structural genom consortium, NESG, alpha-beta protein; 2.30A {Pyrococcus furiosus} SCOP: c.26.2.1 PDB: 3h7e_A 3rk0_A* 3rk1_A* 1ru8_A 2d13_A
Probab=79.19 E-value=8.4 Score=35.66 Aligned_cols=141 Identities=14% Similarity=0.087 Sum_probs=74.1
Q ss_pred ccEEEEEeCChhHHHHHHHHHhcCCCcEEEEecCCCCCcCCCCCccccCCCCCCHHHHHHHHHHcCCcEEEE---CCChh
Q 010065 82 RVVVLVIGGGGREHALCYALKRSHSCDAVFCAPGNAGISNSGDATCIPDLDVLDGDAVISFCRKWSVGLVVV---GPEAP 158 (519)
Q Consensus 82 ~~~vliiG~g~~~~~l~~~l~~~~g~~~v~~~~~~~~~~~~~~~~~v~~~d~~d~~~l~~~~~~~~id~Vi~---g~E~~ 158 (519)
.||++++=+||....++..+....|++++.+....+.. .+.+ .....+.+.+...++..++...+. +.++.
T Consensus 4 ~MKvvvl~SGGkDSs~al~~l~~~G~eV~~L~~~~~~~-----~~s~-~~h~~~~e~a~~~A~~LGIpl~~v~~~g~~~~ 77 (237)
T 3rjz_A 4 LADVAVLYSGGKDSNYALYWAIKNRFSVKFLVTMVSEN-----EESY-MYHTINANLTDLQARALGIPLVKGFTQGEKEK 77 (237)
T ss_dssp CSEEEEECCSSHHHHHHHHHHHHTTCEEEEEEEEECC--------------CCSSSHHHHHHHHHTCCEEEEEC------
T ss_pred CCEEEEEecCcHHHHHHHHHHHHcCCeEEEEEEEcCCC-----CCcc-ccCCccHHHHHHHHHHcCCCEEEEECCCCchH
Confidence 36888888887654444444444488876552110000 0000 011122345566677778776654 22222
Q ss_pred hHHHHHHHHHHCCCCeeCCcHHHHHHhcCHHHHHHHHHHcCCCCCCeeecCCHHHHHHHHHHhCCCEEEEeC
Q 010065 159 LVSGLANKLVKAGIPTFGPSSEAAALEGSKNFMKNLCDKYGIPTAKYKTFTDPNAAKQYIQEEGAPIVVKAD 230 (519)
Q Consensus 159 ~~~~~a~~le~~gip~~g~~~~~~~~~~dK~~~k~~l~~~Gi~~p~~~~v~~~~~~~~~~~~~g~P~VvKP~ 230 (519)
.+..+.+.+...|+..+ ..-++.....|.+..+.+.++|+..--+.-=.+.+++.+-.-..||..++--+
T Consensus 78 e~e~l~~~l~~~~i~~v--v~Gdi~s~yqr~r~e~vc~~~gl~~~~PLW~~d~~~Ll~e~i~~G~~aiiv~v 147 (237)
T 3rjz_A 78 EVEDLKRVLSGLKIQGI--VAGALASKYQRKRIEKVAKELGLEVYTPAWGRDAKEYMRELLNLGFKIMVVGV 147 (237)
T ss_dssp CHHHHHHHHTTSCCSEE--ECC---CCSHHHHHHHHHHHTTCEEECSSSSCCHHHHHHHHHHTTCEEEEEEE
T ss_pred HHHHHHHHHHhcCCcEE--EECCcchHHHHHHHHHHHHHcCCEEEccccCCCHHHHHHHHHHCCCEEEEEEE
Confidence 34566667777777643 22234444557888899999998753222223555555444467888666554
No 123
>3ff4_A Uncharacterized protein; structural genomics, PSI- protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Cytophaga hutchinsonii atcc 33406}
Probab=78.85 E-value=11 Score=30.93 Aligned_cols=91 Identities=14% Similarity=0.142 Sum_probs=46.5
Q ss_pred ccEEEEEeCChh----HHHHHHHHHhcCCCcEEEEecCCCCCc---CCCCCccccCCCCC-------CHHHHHHHHHHcC
Q 010065 82 RVVVLVIGGGGR----EHALCYALKRSHSCDAVFCAPGNAGIS---NSGDATCIPDLDVL-------DGDAVISFCRKWS 147 (519)
Q Consensus 82 ~~~vliiG~g~~----~~~l~~~l~~~~g~~~v~~~~~~~~~~---~~~~~~~v~~~d~~-------d~~~l~~~~~~~~ 147 (519)
.+.|.|+|++.. .+.+.+.|.+. |++++.++|...... ...+-..++.+|.. ....+++-|.+.+
T Consensus 4 p~siAVVGaS~~~~~~g~~v~~~L~~~-g~~V~pVnP~~~~i~G~~~y~sl~dlp~vDlavi~~p~~~v~~~v~e~~~~g 82 (122)
T 3ff4_A 4 MKKTLILGATPETNRYAYLAAERLKSH-GHEFIPVGRKKGEVLGKTIINERPVIEGVDTVTLYINPQNQLSEYNYILSLK 82 (122)
T ss_dssp CCCEEEETCCSCTTSHHHHHHHHHHHH-TCCEEEESSSCSEETTEECBCSCCCCTTCCEEEECSCHHHHGGGHHHHHHHC
T ss_pred CCEEEEEccCCCCCCHHHHHHHHHHHC-CCeEEEECCCCCcCCCeeccCChHHCCCCCEEEEEeCHHHHHHHHHHHHhcC
Confidence 467889997732 35567777766 888888876532111 01000111001110 1233344444455
Q ss_pred CcEEEE--CCChhhHHHHHHHHHHCCCCeeC
Q 010065 148 VGLVVV--GPEAPLVSGLANKLVKAGIPTFG 176 (519)
Q Consensus 148 id~Vi~--g~E~~~~~~~a~~le~~gip~~g 176 (519)
+..|+. |.++. .+.+.+++.|++++|
T Consensus 83 ~k~v~~~~G~~~~---e~~~~a~~~Girvv~ 110 (122)
T 3ff4_A 83 PKRVIFNPGTENE---ELEEILSENGIEPVI 110 (122)
T ss_dssp CSEEEECTTCCCH---HHHHHHHHTTCEEEE
T ss_pred CCEEEECCCCChH---HHHHHHHHcCCeEEC
Confidence 665554 33332 345557777887775
No 124
>3bio_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics, MCSG, PSI-2, GFO/IDH/MO family, protein structure initiative; HET: MSE EPE; 1.80A {Porphyromonas gingivalis}
Probab=78.83 E-value=2.4 Score=40.96 Aligned_cols=112 Identities=14% Similarity=0.081 Sum_probs=58.6
Q ss_pred CccEEEEEeCChhHHHHHHHHHhcCCCcEEEEecCCCCCcCCCCCccccCCCCCCHHHHHHHHHHcCCcEEEECCChhhH
Q 010065 81 QRVVVLVIGGGGREHALCYALKRSHSCDAVFCAPGNAGISNSGDATCIPDLDVLDGDAVISFCRKWSVGLVVVGPEAPLV 160 (519)
Q Consensus 81 ~~~~vliiG~g~~~~~l~~~l~~~~g~~~v~~~~~~~~~~~~~~~~~v~~~d~~d~~~l~~~~~~~~id~Vi~g~E~~~~ 160 (519)
++++|.|+|.|......+..+++..+++.+.+.+.++..... ..+ ...+.+.+.+. .++|+|+...-...-
T Consensus 8 ~~irv~IIG~G~iG~~~~~~l~~~~~~elvav~d~~~~~~~~---~g~---~~~~~~~l~~~---~~~DvViiatp~~~h 78 (304)
T 3bio_A 8 KKIRAAIVGYGNIGRYALQALREAPDFEIAGIVRRNPAEVPF---ELQ---PFRVVSDIEQL---ESVDVALVCSPSREV 78 (304)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHCTTEEEEEEECC----------CCT---TSCEESSGGGS---SSCCEEEECSCHHHH
T ss_pred CCCEEEEECChHHHHHHHHHHhcCCCCEEEEEEcCCHHHHHH---cCC---CcCCHHHHHhC---CCCCEEEECCCchhh
Confidence 367999999996555667778776677776443322221110 001 11112222222 479999986544443
Q ss_pred HHHHHHHHHCCCCeeCCcHHHHHHhcCHHHHHHHHHHcCCC
Q 010065 161 SGLANKLVKAGIPTFGPSSEAAALEGSKNFMKNLCDKYGIP 201 (519)
Q Consensus 161 ~~~a~~le~~gip~~g~~~~~~~~~~dK~~~k~~l~~~Gi~ 201 (519)
..++..+-+.|.+++-..+-......+-..+.+.+++.|+.
T Consensus 79 ~~~~~~al~aG~~Vi~ekP~~a~~~~~~~~l~~~a~~~g~~ 119 (304)
T 3bio_A 79 ERTALEILKKGICTADSFDIHDGILALRRSLGDAAGKSGAA 119 (304)
T ss_dssp HHHHHHHHTTTCEEEECCCCGGGHHHHHHHHHHHHHHHTCE
T ss_pred HHHHHHHHHcCCeEEECCCCCCCCHHHHHHHHHHHHhCCCE
Confidence 34455566679888743332111222334455566677643
No 125
>4ea9_A Perosamine N-acetyltransferase; beta helix, acetyl coenzyme A, GDP-perosa transferase; HET: JBT; 0.90A {Caulobacter vibrioides} PDB: 4ea8_A* 4ea7_A* 4eaa_A* 4eab_A*
Probab=78.24 E-value=9.5 Score=34.52 Aligned_cols=35 Identities=20% Similarity=0.310 Sum_probs=26.4
Q ss_pred CccEEEEEeCChhHHHHHHHHHhcCCCcEEEEecCC
Q 010065 81 QRVVVLVIGGGGREHALCYALKRSHSCDAVFCAPGN 116 (519)
Q Consensus 81 ~~~~vliiG~g~~~~~l~~~l~~~~g~~~v~~~~~~ 116 (519)
++++++|+|+|+....++..|.+. +++.+.+-+++
T Consensus 11 ~~k~v~IiGAGg~g~~v~~~l~~~-~~~~vgfiDd~ 45 (220)
T 4ea9_A 11 AIGGVVIIGGGGHAKVVIESLRAC-GETVAAIVDAD 45 (220)
T ss_dssp CSSCEEEECCSHHHHHHHHHHHHT-TCCEEEEECSC
T ss_pred CCCCEEEEcCCHHHHHHHHHHHhC-CCEEEEEEeCC
Confidence 457899999998877788888764 88876554443
No 126
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=78.23 E-value=7 Score=32.12 Aligned_cols=89 Identities=13% Similarity=0.137 Sum_probs=48.6
Q ss_pred ccEEEEEeCChhHHHHHHHHHhcCCCcEEEEecCCCCCcCCC--CCccccCCCCCCHHHHHHHHHHcCCcEEEEC-CCh-
Q 010065 82 RVVVLVIGGGGREHALCYALKRSHSCDAVFCAPGNAGISNSG--DATCIPDLDVLDGDAVISFCRKWSVGLVVVG-PEA- 157 (519)
Q Consensus 82 ~~~vliiG~g~~~~~l~~~l~~~~g~~~v~~~~~~~~~~~~~--~~~~v~~~d~~d~~~l~~~~~~~~id~Vi~g-~E~- 157 (519)
+++|+|+|.|.....+++.|.+. |++++.++.+........ ....+ ..|..+.+.+.+. .-.++|.|+.. +.+
T Consensus 6 ~~~v~I~G~G~iG~~~a~~l~~~-g~~v~~~d~~~~~~~~~~~~~~~~~-~~d~~~~~~l~~~-~~~~~d~vi~~~~~~~ 82 (144)
T 2hmt_A 6 NKQFAVIGLGRFGGSIVKELHRM-GHEVLAVDINEEKVNAYASYATHAV-IANATEENELLSL-GIRNFEYVIVAIGANI 82 (144)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHT-TCCCEEEESCHHHHHTTTTTCSEEE-ECCTTCHHHHHTT-TGGGCSEEEECCCSCH
T ss_pred CCcEEEECCCHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHhCCEEE-EeCCCCHHHHHhc-CCCCCCEEEECCCCch
Confidence 35799999987777788888876 888877764311111110 11112 3455565554332 12368888874 222
Q ss_pred hhHHHHHHHHHHCCCC
Q 010065 158 PLVSGLANKLVKAGIP 173 (519)
Q Consensus 158 ~~~~~~a~~le~~gip 173 (519)
.....+...+...|.+
T Consensus 83 ~~~~~~~~~~~~~~~~ 98 (144)
T 2hmt_A 83 QASTLTTLLLKELDIP 98 (144)
T ss_dssp HHHHHHHHHHHHTTCS
T ss_pred HHHHHHHHHHHHcCCC
Confidence 2222344445555544
No 127
>2dtx_A Glucose 1-dehydrogenase related protein; rossmann fold, oxidoreductase; HET: BMA; 1.60A {Thermoplasma acidophilum} PDB: 2dtd_A* 2dte_A* 2zk7_A
Probab=78.17 E-value=7.9 Score=36.16 Aligned_cols=67 Identities=21% Similarity=0.256 Sum_probs=44.3
Q ss_pred ccEEEEEeCC-hhHHHHHHHHHhcCCCcEEEEecCCCCCcCCCCCccccCCCCCCHHHHHHHHHHc-----CCcEEEE
Q 010065 82 RVVVLVIGGG-GREHALCYALKRSHSCDAVFCAPGNAGISNSGDATCIPDLDVLDGDAVISFCRKW-----SVGLVVV 153 (519)
Q Consensus 82 ~~~vliiG~g-~~~~~l~~~l~~~~g~~~v~~~~~~~~~~~~~~~~~v~~~d~~d~~~l~~~~~~~-----~id~Vi~ 153 (519)
.++++|+|++ +....+++.|.+. |++++.++.+... ......+ ..|..|.+.+.+++++. ++|+++.
T Consensus 8 ~k~vlVTGas~gIG~~ia~~l~~~-G~~V~~~~r~~~~---~~~~~~~-~~Dl~~~~~v~~~~~~~~~~~g~iD~lv~ 80 (264)
T 2dtx_A 8 DKVVIVTGASMGIGRAIAERFVDE-GSKVIDLSIHDPG---EAKYDHI-ECDVTNPDQVKASIDHIFKEYGSISVLVN 80 (264)
T ss_dssp TCEEEEESCSSHHHHHHHHHHHHT-TCEEEEEESSCCC---SCSSEEE-ECCTTCHHHHHHHHHHHHHHHSCCCEEEE
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHC-CCEEEEEecCccc---CCceEEE-EecCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence 4689999966 4556788888887 8888777543221 1112223 56888877776665542 6999997
No 128
>3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei}
Probab=77.90 E-value=4.9 Score=39.46 Aligned_cols=70 Identities=11% Similarity=0.152 Sum_probs=45.3
Q ss_pred CccEEEEEeCCh-hHHHHHHHHHhcCCCcEEEEecCCCCCcCC---CCCccccCCCCC-CHHHHHHHHHHcCCcEEEE
Q 010065 81 QRVVVLVIGGGG-REHALCYALKRSHSCDAVFCAPGNAGISNS---GDATCIPDLDVL-DGDAVISFCRKWSVGLVVV 153 (519)
Q Consensus 81 ~~~~vliiG~g~-~~~~l~~~l~~~~g~~~v~~~~~~~~~~~~---~~~~~v~~~d~~-d~~~l~~~~~~~~id~Vi~ 153 (519)
.+++|||+|+.| ....++..|.+..|++++.++......... .....+ ..|.. |.+.+.++++ ++|.||-
T Consensus 23 ~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~v~~~-~~Dl~~d~~~~~~~~~--~~d~Vih 97 (372)
T 3slg_A 23 KAKKVLILGVNGFIGHHLSKRILETTDWEVFGMDMQTDRLGDLVKHERMHFF-EGDITINKEWVEYHVK--KCDVILP 97 (372)
T ss_dssp CCCEEEEESCSSHHHHHHHHHHHHHSSCEEEEEESCCTTTGGGGGSTTEEEE-ECCTTTCHHHHHHHHH--HCSEEEE
T ss_pred CCCEEEEECCCChHHHHHHHHHHhCCCCEEEEEeCChhhhhhhccCCCeEEE-eCccCCCHHHHHHHhc--cCCEEEE
Confidence 357999999654 456678888766578887776443222111 112223 56877 7787777776 5899986
No 129
>2dt5_A AT-rich DNA-binding protein; REX, NADH, NAD, rossmann fold, redox sensing, winged helix, themophilus; HET: NAD; 2.16A {Thermus thermophilus} SCOP: a.4.5.38 c.2.1.12 PDB: 1xcb_A* 3ikt_A* 3ikv_A 3il2_A*
Probab=77.85 E-value=1.9 Score=39.35 Aligned_cols=88 Identities=14% Similarity=-0.023 Sum_probs=49.1
Q ss_pred CccEEEEEeCChhHHHHHHHH-HhcCCCcEEEEecCCCCCcCCCCCccccCCCCCCHHHHHHHHHHcCCcEEEECCChhh
Q 010065 81 QRVVVLVIGGGGREHALCYAL-KRSHSCDAVFCAPGNAGISNSGDATCIPDLDVLDGDAVISFCRKWSVGLVVVGPEAPL 159 (519)
Q Consensus 81 ~~~~vliiG~g~~~~~l~~~l-~~~~g~~~v~~~~~~~~~~~~~~~~~v~~~d~~d~~~l~~~~~~~~id~Vi~g~E~~~ 159 (519)
+.++|+|+|+|.....++..+ .+. |++.+.+.+.++...... ...++... .+.+.+++++ ++|.|+.......
T Consensus 79 ~~~rV~IIGaG~~G~~la~~~~~~~-g~~iVg~~D~dp~k~g~~-i~gv~V~~---~~dl~ell~~-~ID~ViIA~Ps~~ 152 (211)
T 2dt5_A 79 RKWGLCIVGMGRLGSALADYPGFGE-SFELRGFFDVDPEKVGRP-VRGGVIEH---VDLLPQRVPG-RIEIALLTVPREA 152 (211)
T ss_dssp SCEEEEEECCSHHHHHHHHCSCCCS-SEEEEEEEESCTTTTTCE-ETTEEEEE---GGGHHHHSTT-TCCEEEECSCHHH
T ss_pred CCCEEEEECccHHHHHHHHhHhhcC-CcEEEEEEeCCHHHHhhh-hcCCeeec---HHhHHHHHHc-CCCEEEEeCCchh
Confidence 457899999996444444431 122 566655544444322110 01111112 3346666777 8999998644444
Q ss_pred HHHHHHHHHHCCCCe
Q 010065 160 VSGLANKLVKAGIPT 174 (519)
Q Consensus 160 ~~~~a~~le~~gip~ 174 (519)
.+.+++.+.+.|++.
T Consensus 153 ~~ei~~~l~~aGi~~ 167 (211)
T 2dt5_A 153 AQKAADLLVAAGIKG 167 (211)
T ss_dssp HHHHHHHHHHHTCCE
T ss_pred HHHHHHHHHHcCCCE
Confidence 456777788888773
No 130
>3rft_A Uronate dehydrogenase; apoenzyme, rossmann fold, NAD binding, oxidoreductase; 1.90A {Agrobacterium tumefaciens} PDB: 3rfv_A* 3rfx_A*
Probab=77.71 E-value=3.8 Score=38.37 Aligned_cols=67 Identities=15% Similarity=0.138 Sum_probs=44.6
Q ss_pred ccEEEEEeCC-hhHHHHHHHHHhcCCCcEEEEecCCCCCcCCCCCccccCCCCCCHHHHHHHHHHcCCcEEEE
Q 010065 82 RVVVLVIGGG-GREHALCYALKRSHSCDAVFCAPGNAGISNSGDATCIPDLDVLDGDAVISFCRKWSVGLVVV 153 (519)
Q Consensus 82 ~~~vliiG~g-~~~~~l~~~l~~~~g~~~v~~~~~~~~~~~~~~~~~v~~~d~~d~~~l~~~~~~~~id~Vi~ 153 (519)
+++|+|+|++ +....++..|.+. |.+++.++.+..... ......+ ..|..|.+.+.++++ ++|.||.
T Consensus 3 ~k~vlVTGasg~IG~~la~~L~~~-G~~V~~~~r~~~~~~-~~~~~~~-~~Dl~d~~~~~~~~~--~~D~vi~ 70 (267)
T 3rft_A 3 MKRLLVTGAAGQLGRVMRERLAPM-AEILRLADLSPLDPA-GPNEECV-QCDLADANAVNAMVA--GCDGIVH 70 (267)
T ss_dssp EEEEEEESTTSHHHHHHHHHTGGG-EEEEEEEESSCCCCC-CTTEEEE-ECCTTCHHHHHHHHT--TCSEEEE
T ss_pred CCEEEEECCCCHHHHHHHHHHHhc-CCEEEEEecCCcccc-CCCCEEE-EcCCCCHHHHHHHHc--CCCEEEE
Confidence 4689999965 4556778888776 887777654322111 1112223 578888888888776 7899997
No 131
>2nm0_A Probable 3-oxacyl-(acyl-carrier-protein) reductas; oxidoreductase; 1.99A {Streptomyces coelicolor}
Probab=77.68 E-value=7.7 Score=36.02 Aligned_cols=67 Identities=18% Similarity=0.213 Sum_probs=43.6
Q ss_pred ccEEEEEeCC-hhHHHHHHHHHhcCCCcEEEEecCCCCCcCCCCCccccCCCCCCHHHHHHHHHH-----cCCcEEEE
Q 010065 82 RVVVLVIGGG-GREHALCYALKRSHSCDAVFCAPGNAGISNSGDATCIPDLDVLDGDAVISFCRK-----WSVGLVVV 153 (519)
Q Consensus 82 ~~~vliiG~g-~~~~~l~~~l~~~~g~~~v~~~~~~~~~~~~~~~~~v~~~d~~d~~~l~~~~~~-----~~id~Vi~ 153 (519)
.++++|+|++ +....++..|.+. |.+++.++.+..... ....+ ..|..|.+.+.+++++ .++|+++.
T Consensus 21 ~k~vlVTGas~gIG~aia~~l~~~-G~~V~~~~r~~~~~~---~~~~~-~~Dl~d~~~v~~~~~~~~~~~g~iD~lv~ 93 (253)
T 2nm0_A 21 SRSVLVTGGNRGIGLAIARAFADA-GDKVAITYRSGEPPE---GFLAV-KCDITDTEQVEQAYKEIEETHGPVEVLIA 93 (253)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHT-TCEEEEEESSSCCCT---TSEEE-ECCTTSHHHHHHHHHHHHHHTCSCSEEEE
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHC-CCEEEEEeCChHhhc---cceEE-EecCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence 4689999976 3456788888877 888877654321111 12223 5688887777666554 25899887
No 132
>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A*
Probab=77.58 E-value=3.3 Score=40.29 Aligned_cols=68 Identities=16% Similarity=0.042 Sum_probs=45.0
Q ss_pred ccEEEEEeCCh-hHHHHHHHHHhcCCCcEEEEecCCCCCcC-C------------CCCccccCCCCCCHHHHHHHHHHcC
Q 010065 82 RVVVLVIGGGG-REHALCYALKRSHSCDAVFCAPGNAGISN-S------------GDATCIPDLDVLDGDAVISFCRKWS 147 (519)
Q Consensus 82 ~~~vliiG~g~-~~~~l~~~l~~~~g~~~v~~~~~~~~~~~-~------------~~~~~v~~~d~~d~~~l~~~~~~~~ 147 (519)
+++|||+|+.| ....++..|.+. |++++.++........ . .....+ ..|..|.+.+.++++ +
T Consensus 25 ~~~vlVtGatG~iG~~l~~~L~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~Dl~d~~~~~~~~~--~ 100 (351)
T 3ruf_A 25 PKTWLITGVAGFIGSNLLEKLLKL-NQVVIGLDNFSTGHQYNLDEVKTLVSTEQWSRFCFI-EGDIRDLTTCEQVMK--G 100 (351)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHT-TCEEEEEECCSSCCHHHHHHHHHTSCHHHHTTEEEE-ECCTTCHHHHHHHTT--T
T ss_pred CCeEEEECCCcHHHHHHHHHHHHC-CCEEEEEeCCCCCchhhhhhhhhccccccCCceEEE-EccCCCHHHHHHHhc--C
Confidence 57999999754 556788888877 8888877643221110 0 112223 568888888877765 7
Q ss_pred CcEEEE
Q 010065 148 VGLVVV 153 (519)
Q Consensus 148 id~Vi~ 153 (519)
+|.||-
T Consensus 101 ~d~Vih 106 (351)
T 3ruf_A 101 VDHVLH 106 (351)
T ss_dssp CSEEEE
T ss_pred CCEEEE
Confidence 899997
No 133
>3sc6_A DTDP-4-dehydrorhamnose reductase; RFBD, structural genomics, infectious diseases, bacillus anthracis STR. AMES, rhamnose biosynthetic pathway; HET: NAP; 2.65A {Bacillus anthracis} SCOP: c.2.1.0
Probab=77.25 E-value=3.5 Score=38.82 Aligned_cols=56 Identities=14% Similarity=0.106 Sum_probs=41.6
Q ss_pred cEEEEEeCC-hhHHHHHHHHHhcCCCcEEEEecCCCCCcCCCCCccccCCCCCCHHHHHHHHHHcCCcEEEE
Q 010065 83 VVVLVIGGG-GREHALCYALKRSHSCDAVFCAPGNAGISNSGDATCIPDLDVLDGDAVISFCRKWSVGLVVV 153 (519)
Q Consensus 83 ~~vliiG~g-~~~~~l~~~l~~~~g~~~v~~~~~~~~~~~~~~~~~v~~~d~~d~~~l~~~~~~~~id~Vi~ 153 (519)
|+|||+|+. .....++..|.+. |++++.++. . ..|..|.+.+.++++..++|+||-
T Consensus 6 m~ilVtGatG~iG~~l~~~L~~~-g~~V~~~~r-------------~-~~D~~d~~~~~~~~~~~~~d~vi~ 62 (287)
T 3sc6_A 6 ERVIITGANGQLGKQLQEELNPE-EYDIYPFDK-------------K-LLDITNISQVQQVVQEIRPHIIIH 62 (287)
T ss_dssp EEEEEESTTSHHHHHHHHHSCTT-TEEEEEECT-------------T-TSCTTCHHHHHHHHHHHCCSEEEE
T ss_pred eEEEEECCCCHHHHHHHHHHHhC-CCEEEEecc-------------c-ccCCCCHHHHHHHHHhcCCCEEEE
Confidence 489999975 4456677777766 887776532 1 457778888888888778999997
No 134
>3ec7_A Putative dehydrogenase; alpha-beta, structural genomics, PSI-2, protein structure in midwest center for structural genomics, MCSG; HET: MSE NAD EPE; 2.15A {Salmonella typhimurium}
Probab=77.20 E-value=2.2 Score=42.25 Aligned_cols=141 Identities=15% Similarity=0.109 Sum_probs=72.7
Q ss_pred ccEEEEEeCChhHHHHHHHHH-hcCCCcEEEEecCCCCCcCCCCCccccCC---CCCCHHHHHHHHHHcCCcEEEECCCh
Q 010065 82 RVVVLVIGGGGREHALCYALK-RSHSCDAVFCAPGNAGISNSGDATCIPDL---DVLDGDAVISFCRKWSVGLVVVGPEA 157 (519)
Q Consensus 82 ~~~vliiG~g~~~~~l~~~l~-~~~g~~~v~~~~~~~~~~~~~~~~~v~~~---d~~d~~~l~~~~~~~~id~Vi~g~E~ 157 (519)
+++|.|||.|......+..+. +..+++++.+.+.++..... ....+ .+ -..+.+++ +...++|+|+...-.
T Consensus 23 ~~rvgiIG~G~~g~~~~~~l~~~~~~~~lvav~d~~~~~~~~-~a~~~-g~~~~~~~~~~~l---l~~~~~D~V~i~tp~ 97 (357)
T 3ec7_A 23 TLKAGIVGIGMIGSDHLRRLANTVSGVEVVAVCDIVAGRAQA-ALDKY-AIEAKDYNDYHDL---INDKDVEVVIITASN 97 (357)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTCTTEEEEEEECSSTTHHHH-HHHHH-TCCCEEESSHHHH---HHCTTCCEEEECSCG
T ss_pred eeeEEEECCcHHHHHHHHHHHhhCCCcEEEEEEeCCHHHHHH-HHHHh-CCCCeeeCCHHHH---hcCCCCCEEEEcCCc
Confidence 569999999975555667776 44577776554333221100 00111 10 12344444 445679999986544
Q ss_pred hhHHHHHHHHHHCCCCeeCCcHHHHHHhcCHHHHHHHHHHcCCCC--CCeee-cC-CHHHHHHHHHH--hCCCEEEE
Q 010065 158 PLVSGLANKLVKAGIPTFGPSSEAAALEGSKNFMKNLCDKYGIPT--AKYKT-FT-DPNAAKQYIQE--EGAPIVVK 228 (519)
Q Consensus 158 ~~~~~~a~~le~~gip~~g~~~~~~~~~~dK~~~k~~l~~~Gi~~--p~~~~-v~-~~~~~~~~~~~--~g~P~VvK 228 (519)
..-..++..+-+.|.+++.-.|-+... .+=..+.+++++.|+.. ..+.. .. ....+.+.+++ +|-+..+.
T Consensus 98 ~~h~~~~~~al~aGk~Vl~EKPla~~~-~e~~~l~~~a~~~g~~~~~v~~~~R~~p~~~~~k~~i~~g~iG~i~~v~ 173 (357)
T 3ec7_A 98 EAHADVAVAALNANKYVFCEKPLAVTA-ADCQRVIEAEQKNGKRMVQIGFMRRYDKGYVQLKNIIDSGEIGQPLMVH 173 (357)
T ss_dssp GGHHHHHHHHHHTTCEEEEESSSCSSH-HHHHHHHHHHHHHTSCCEEEECGGGGSHHHHHHHHHHHHTTTCSEEEEE
T ss_pred HHHHHHHHHHHHCCCCEEeecCccCCH-HHHHHHHHHHHHhCCeEEEEeecccCCHHHHHHHHHHhcCCCCCeEEEE
Confidence 443445555667788776322221111 11123455677888754 22211 11 22345555544 67666554
No 135
>1n2s_A DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold, sugar-nucleotide-binding domain; HET: NAD; 2.00A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1kc1_A* 1kc3_A* 1kbz_A*
Probab=77.14 E-value=5.3 Score=37.75 Aligned_cols=59 Identities=17% Similarity=0.133 Sum_probs=42.4
Q ss_pred cEEEEEeCCh-hHHHHHHHHHhcCCCcEEEEecCCCCCcCCCCCccccCCCCCCHHHHHHHHHHcCCcEEEE
Q 010065 83 VVVLVIGGGG-REHALCYALKRSHSCDAVFCAPGNAGISNSGDATCIPDLDVLDGDAVISFCRKWSVGLVVV 153 (519)
Q Consensus 83 ~~vliiG~g~-~~~~l~~~l~~~~g~~~v~~~~~~~~~~~~~~~~~v~~~d~~d~~~l~~~~~~~~id~Vi~ 153 (519)
|+|+|+|+.| ....++..|. . |++++.++... ..+ ..|..|.+.+.++++..++|+||-
T Consensus 1 m~ilVtGatG~iG~~l~~~L~-~-g~~V~~~~r~~---------~~~-~~D~~d~~~~~~~~~~~~~d~vih 60 (299)
T 1n2s_A 1 MNILLFGKTGQVGWELQRSLA-P-VGNLIALDVHS---------KEF-CGDFSNPKGVAETVRKLRPDVIVN 60 (299)
T ss_dssp CEEEEECTTSHHHHHHHHHTT-T-TSEEEEECTTC---------SSS-CCCTTCHHHHHHHHHHHCCSEEEE
T ss_pred CeEEEECCCCHHHHHHHHHhh-c-CCeEEEecccc---------ccc-cccCCCHHHHHHHHHhcCCCEEEE
Confidence 5899999854 4566788877 5 88877764321 112 467778888888887778999997
No 136
>3e9m_A Oxidoreductase, GFO/IDH/MOCA family; GFO/LDH/MOCA, PSI-II, dimeric dihydodiol dehydrogenase, structural genomics; 2.70A {Enterococcus faecalis}
Probab=77.12 E-value=2.3 Score=41.49 Aligned_cols=144 Identities=10% Similarity=0.069 Sum_probs=74.9
Q ss_pred CccEEEEEeCChhHHHHHHHHHhcCCCcEEEEecCCCCCcCCCCCcccc-CCCCCCHHHHHHHHHHcCCcEEEECCChhh
Q 010065 81 QRVVVLVIGGGGREHALCYALKRSHSCDAVFCAPGNAGISNSGDATCIP-DLDVLDGDAVISFCRKWSVGLVVVGPEAPL 159 (519)
Q Consensus 81 ~~~~vliiG~g~~~~~l~~~l~~~~g~~~v~~~~~~~~~~~~~~~~~v~-~~d~~d~~~l~~~~~~~~id~Vi~g~E~~~ 159 (519)
++++|.|||.|......+..+.+..+++++.+.+.+...... ...... ..-..+.+++ +...++|+|+...-...
T Consensus 4 ~~~~igiiG~G~~g~~~~~~l~~~~~~~l~av~d~~~~~~~~-~~~~~~~~~~~~~~~~l---l~~~~~D~V~i~tp~~~ 79 (330)
T 3e9m_A 4 DKIRYGIMSTAQIVPRFVAGLRESAQAEVRGIASRRLENAQK-MAKELAIPVAYGSYEEL---CKDETIDIIYIPTYNQG 79 (330)
T ss_dssp CCEEEEECSCCTTHHHHHHHHHHSSSEEEEEEBCSSSHHHHH-HHHHTTCCCCBSSHHHH---HHCTTCSEEEECCCGGG
T ss_pred CeEEEEEECchHHHHHHHHHHHhCCCcEEEEEEeCCHHHHHH-HHHHcCCCceeCCHHHH---hcCCCCCEEEEcCCCHH
Confidence 357999999997665667788776677776554333211100 001110 0112345544 44567999998644444
Q ss_pred HHHHHHHHHHCCCCeeCCcHHHHHHhcCHHHHHHHHHHcCCCCCC-ee--ecCCHHHHHHHHH--HhCCCEEEEe
Q 010065 160 VSGLANKLVKAGIPTFGPSSEAAALEGSKNFMKNLCDKYGIPTAK-YK--TFTDPNAAKQYIQ--EEGAPIVVKA 229 (519)
Q Consensus 160 ~~~~a~~le~~gip~~g~~~~~~~~~~dK~~~k~~l~~~Gi~~p~-~~--~v~~~~~~~~~~~--~~g~P~VvKP 229 (519)
-..++..+-+.|.+++.-.+-+... .+=..+.+++++.|+..-. +. .......+.+.++ .+|-+..+.-
T Consensus 80 h~~~~~~al~~gk~vl~EKP~~~~~-~e~~~l~~~a~~~g~~~~v~~~~r~~p~~~~~k~~i~~g~iG~i~~i~~ 153 (330)
T 3e9m_A 80 HYSAAKLALSQGKPVLLEKPFTLNA-AEAEELFAIAQEQGVFLMEAQKSVFLPITQKVKATIQEGGLGEILWVQS 153 (330)
T ss_dssp HHHHHHHHHHTTCCEEECSSCCSSH-HHHHHHHHHHHHTTCCEEECCSGGGCHHHHHHHHHHHTTTTCSEEEEEE
T ss_pred HHHHHHHHHHCCCeEEEeCCCCCCH-HHHHHHHHHHHHcCCeEEEEEhhhhCHHHHHHHHHHhCCCCCCeEEEEE
Confidence 3345555666788776333222111 1112355667788875421 11 1112334566665 4666655553
No 137
>4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli}
Probab=76.93 E-value=2.9 Score=39.66 Aligned_cols=81 Identities=19% Similarity=0.191 Sum_probs=46.6
Q ss_pred ccccCCCCCCCccEEEEEeCC-hhHHHHHHHHHhcCCCcEEEEecCCCCCcC----C-CCCccccCCCCCCHHHHHHHHH
Q 010065 71 VSVNAPTNAGQRVVVLVIGGG-GREHALCYALKRSHSCDAVFCAPGNAGISN----S-GDATCIPDLDVLDGDAVISFCR 144 (519)
Q Consensus 71 vS~~s~~~~~~~~~vliiG~g-~~~~~l~~~l~~~~g~~~v~~~~~~~~~~~----~-~~~~~v~~~d~~d~~~l~~~~~ 144 (519)
.++.....-.+.++++|+|++ +....+++.|.+. |.++++++.+...... . .....+ ..|..|.+.+.++++
T Consensus 16 ~~~~~~~~~l~~k~vlVTGas~GIG~aia~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~-~~Dv~d~~~v~~~~~ 93 (277)
T 4dqx_A 16 ENLYFQSMDLNQRVCIVTGGGSGIGRATAELFAKN-GAYVVVADVNEDAAVRVANEIGSKAFGV-RVDVSSAKDAESMVE 93 (277)
T ss_dssp ------CCTTTTCEEEEETTTSHHHHHHHHHHHHT-TCEEEEEESSHHHHHHHHHHHCTTEEEE-ECCTTCHHHHHHHHH
T ss_pred cccccccCCCCCCEEEEECCCcHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHhCCceEEE-EecCCCHHHHHHHHH
Confidence 333333333456789999976 4566788998887 8988877543211000 0 011223 568888777766665
Q ss_pred Hc-----CCcEEEE
Q 010065 145 KW-----SVGLVVV 153 (519)
Q Consensus 145 ~~-----~id~Vi~ 153 (519)
+. ++|+++.
T Consensus 94 ~~~~~~g~iD~lv~ 107 (277)
T 4dqx_A 94 KTTAKWGRVDVLVN 107 (277)
T ss_dssp HHHHHHSCCCEEEE
T ss_pred HHHHHcCCCCEEEE
Confidence 43 7999887
No 138
>1t2a_A GDP-mannose 4,6 dehydratase; structural genomics consortium, rossman-fold, short-chain dehydrogenase/reductase, SDR, structural genomics,lyase; HET: NDP GDP; 1.84A {Homo sapiens} SCOP: c.2.1.2
Probab=76.91 E-value=6.4 Score=38.70 Aligned_cols=69 Identities=13% Similarity=0.054 Sum_probs=46.0
Q ss_pred cEEEEEeCC-hhHHHHHHHHHhcCCCcEEEEecCCCC-----CcCC---------CCCccccCCCCCCHHHHHHHHHHcC
Q 010065 83 VVVLVIGGG-GREHALCYALKRSHSCDAVFCAPGNAG-----ISNS---------GDATCIPDLDVLDGDAVISFCRKWS 147 (519)
Q Consensus 83 ~~vliiG~g-~~~~~l~~~l~~~~g~~~v~~~~~~~~-----~~~~---------~~~~~v~~~d~~d~~~l~~~~~~~~ 147 (519)
++|||+|+. .....++..|.+. |++++.++..... .... .....+ ..|..|.+.+.++++..+
T Consensus 25 ~~vlVtGatG~iG~~l~~~L~~~-g~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~~~~-~~Dl~d~~~~~~~~~~~~ 102 (375)
T 1t2a_A 25 NVALITGITGQDGSYLAEFLLEK-GYEVHGIVRRSSSFNTGRIEHLYKNPQAHIEGNMKLH-YGDLTDSTCLVKIINEVK 102 (375)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHT-TCEEEEEECCCSSCCCTTTGGGC---------CEEEE-ECCTTCHHHHHHHHHHHC
T ss_pred cEEEEECCCchHHHHHHHHHHHC-CCEEEEEECCccccchhhHHHHhhhhccccCCCceEE-EccCCCHHHHHHHHHhcC
Confidence 589999965 4556788888877 8888777643211 0000 011122 468888888888888778
Q ss_pred CcEEEE
Q 010065 148 VGLVVV 153 (519)
Q Consensus 148 id~Vi~ 153 (519)
+|.||-
T Consensus 103 ~d~vih 108 (375)
T 1t2a_A 103 PTEIYN 108 (375)
T ss_dssp CSEEEE
T ss_pred CCEEEE
Confidence 999997
No 139
>3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti}
Probab=76.80 E-value=7.7 Score=35.93 Aligned_cols=71 Identities=14% Similarity=0.048 Sum_probs=44.5
Q ss_pred CccEEEEEeCC-hhHHHHHHHHHhcCCCcEEEEecCCCCCcCC-----CCCccccCCCCCCHHHHHHHHHHc-----CCc
Q 010065 81 QRVVVLVIGGG-GREHALCYALKRSHSCDAVFCAPGNAGISNS-----GDATCIPDLDVLDGDAVISFCRKW-----SVG 149 (519)
Q Consensus 81 ~~~~vliiG~g-~~~~~l~~~l~~~~g~~~v~~~~~~~~~~~~-----~~~~~v~~~d~~d~~~l~~~~~~~-----~id 149 (519)
+.++++|+|++ +....++..|.+. |.+++.++.+....... .....+ ..|..|.+.+.+++++. ++|
T Consensus 6 ~~k~~lVTGas~gIG~aia~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~-~~Dv~~~~~v~~~~~~~~~~~g~id 83 (257)
T 3tpc_A 6 KSRVFIVTGASSGLGAAVTRMLAQE-GATVLGLDLKPPAGEEPAAELGAAVRFR-NADVTNEADATAALAFAKQEFGHVH 83 (257)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHT-TCEEEEEESSCC------------CEEE-ECCTTCHHHHHHHHHHHHHHHSCCC
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHC-CCEEEEEeCChHHHHHHHHHhCCceEEE-EccCCCHHHHHHHHHHHHHHcCCCC
Confidence 35789999976 4566788888887 89888776442221111 011222 56888877776666542 799
Q ss_pred EEEE
Q 010065 150 LVVV 153 (519)
Q Consensus 150 ~Vi~ 153 (519)
+++.
T Consensus 84 ~lv~ 87 (257)
T 3tpc_A 84 GLVN 87 (257)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 9997
No 140
>3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp}
Probab=76.79 E-value=15 Score=34.44 Aligned_cols=68 Identities=12% Similarity=0.224 Sum_probs=43.6
Q ss_pred cEEEEEeCCh-hHHHHHHHHHhcCCCcEEEEecCCCCCcCC--CCCccccCCCCCCHHHHHHHHHHcCCcEEEE
Q 010065 83 VVVLVIGGGG-REHALCYALKRSHSCDAVFCAPGNAGISNS--GDATCIPDLDVLDGDAVISFCRKWSVGLVVV 153 (519)
Q Consensus 83 ~~vliiG~g~-~~~~l~~~l~~~~g~~~v~~~~~~~~~~~~--~~~~~v~~~d~~d~~~l~~~~~~~~id~Vi~ 153 (519)
|+|||+|+.| ....++..|.+..|++++.+..+....... .....+ ..|..|.+.+.+..+ ++|.||.
T Consensus 1 M~ilVtGatG~iG~~l~~~L~~~~g~~V~~~~R~~~~~~~~~~~~v~~~-~~D~~d~~~l~~~~~--~~d~vi~ 71 (289)
T 3e48_A 1 MNIMLTGATGHLGTHITNQAIANHIDHFHIGVRNVEKVPDDWRGKVSVR-QLDYFNQESMVEAFK--GMDTVVF 71 (289)
T ss_dssp CCEEEETTTSHHHHHHHHHHHHTTCTTEEEEESSGGGSCGGGBTTBEEE-ECCTTCHHHHHHHTT--TCSEEEE
T ss_pred CEEEEEcCCchHHHHHHHHHhhCCCCcEEEEECCHHHHHHhhhCCCEEE-EcCCCCHHHHHHHHh--CCCEEEE
Confidence 5799999754 556678887765578888775432111111 112223 578888888877664 6899987
No 141
>2d59_A Hypothetical protein PH1109; COA binding, structural genomics; 1.65A {Pyrococcus horikoshii} SCOP: c.2.1.8 PDB: 2d5a_A* 2e6u_X* 3qa9_A 3q9n_A* 3q9u_A*
Probab=76.16 E-value=21 Score=29.89 Aligned_cols=33 Identities=12% Similarity=0.132 Sum_probs=23.0
Q ss_pred ccEEEEEeCC----hhHHHHHHHHHhcCCCcEEEEecC
Q 010065 82 RVVVLVIGGG----GREHALCYALKRSHSCDAVFCAPG 115 (519)
Q Consensus 82 ~~~vliiG~g----~~~~~l~~~l~~~~g~~~v~~~~~ 115 (519)
.++|.|+|.+ ...+.++..|.+. |++++-++|.
T Consensus 22 p~~iaVVGas~~~g~~G~~~~~~l~~~-G~~v~~Vnp~ 58 (144)
T 2d59_A 22 YKKIALVGASPKPERDANIVMKYLLEH-GYDVYPVNPK 58 (144)
T ss_dssp CCEEEEETCCSCTTSHHHHHHHHHHHT-TCEEEEECTT
T ss_pred CCEEEEEccCCCCCchHHHHHHHHHHC-CCEEEEECCC
Confidence 5789999985 2345667777766 8876656554
No 142
>4ew6_A D-galactose-1-dehydrogenase protein; nysgrc, PSI-biology, structural genomics, NEW YORK structura genomics research consortium, two domain; 2.30A {Rhizobium etli}
Probab=75.48 E-value=5.9 Score=38.59 Aligned_cols=109 Identities=16% Similarity=0.127 Sum_probs=61.7
Q ss_pred ccEEEEEeCChhHH-HHHHHHHhcCCCcEEEEecCCCCCcCCCCCccccCCCCCCHHHHHHHHHH-cCCcEEEECCChhh
Q 010065 82 RVVVLVIGGGGREH-ALCYALKRSHSCDAVFCAPGNAGISNSGDATCIPDLDVLDGDAVISFCRK-WSVGLVVVGPEAPL 159 (519)
Q Consensus 82 ~~~vliiG~g~~~~-~l~~~l~~~~g~~~v~~~~~~~~~~~~~~~~~v~~~d~~d~~~l~~~~~~-~~id~Vi~g~E~~~ 159 (519)
+++|.|||.|.... ..+..+++..+++++.+.+.+.... .+ . -..+.+++ +.. .++|+|+...-...
T Consensus 25 ~~rvgiiG~G~ig~~~~~~~l~~~~~~~lvav~d~~~~~~------g~-~-~~~~~~~l---l~~~~~vD~V~i~tp~~~ 93 (330)
T 4ew6_A 25 PINLAIVGVGKIVRDQHLPSIAKNANFKLVATASRHGTVE------GV-N-SYTTIEAM---LDAEPSIDAVSLCMPPQY 93 (330)
T ss_dssp CEEEEEECCSHHHHHTHHHHHHHCTTEEEEEEECSSCCCT------TS-E-EESSHHHH---HHHCTTCCEEEECSCHHH
T ss_pred CceEEEEecCHHHHHHHHHHHHhCCCeEEEEEEeCChhhc------CC-C-ccCCHHHH---HhCCCCCCEEEEeCCcHH
Confidence 57999999996543 3566676666777776654332211 11 0 12345555 445 67999998655544
Q ss_pred HHHHHHHHHHCCCCeeCCcHHHHHHhcCHHHHHHHHHHcCCCC
Q 010065 160 VSGLANKLVKAGIPTFGPSSEAAALEGSKNFMKNLCDKYGIPT 202 (519)
Q Consensus 160 ~~~~a~~le~~gip~~g~~~~~~~~~~dK~~~k~~l~~~Gi~~ 202 (519)
-..++..+-+.|.+++.-.|-+... .+=..+.+++++.|+..
T Consensus 94 H~~~~~~al~aGkhVl~EKP~a~~~-~e~~~l~~~a~~~g~~~ 135 (330)
T 4ew6_A 94 RYEAAYKALVAGKHVFLEKPPGATL-SEVADLEALANKQGASL 135 (330)
T ss_dssp HHHHHHHHHHTTCEEEECSSSCSSH-HHHHHHHHHHHHHTCCE
T ss_pred HHHHHHHHHHcCCcEEEeCCCCCCH-HHHHHHHHHHHhcCCeE
Confidence 3455555667798887433322211 11123445667777654
No 143
>1orr_A CDP-tyvelose-2-epimerase; rossmann fold, short-chain dehydrogenase/reductase, isomeras; HET: NAD CDP; 1.50A {Salmonella typhi} SCOP: c.2.1.2
Probab=75.41 E-value=6.3 Score=38.05 Aligned_cols=69 Identities=14% Similarity=0.143 Sum_probs=45.6
Q ss_pred cEEEEEeCC-hhHHHHHHHHHhcCCCcEEEEecCC-CCCc-------CCCCCccccCCCCCCHHHHHHHHHHcCCcEEEE
Q 010065 83 VVVLVIGGG-GREHALCYALKRSHSCDAVFCAPGN-AGIS-------NSGDATCIPDLDVLDGDAVISFCRKWSVGLVVV 153 (519)
Q Consensus 83 ~~vliiG~g-~~~~~l~~~l~~~~g~~~v~~~~~~-~~~~-------~~~~~~~v~~~d~~d~~~l~~~~~~~~id~Vi~ 153 (519)
|+|||+|+. .....++..|.+. |++++.++... .... .......+ ..|..|.+.+.++++..++|+||-
T Consensus 2 ~~vlVTGatG~iG~~l~~~L~~~-g~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~-~~Dl~d~~~~~~~~~~~~~d~vih 79 (347)
T 1orr_A 2 AKLLITGGCGFLGSNLASFALSQ-GIDLIVFDNLSRKGATDNLHWLSSLGNFEFV-HGDIRNKNDVTRLITKYMPDSCFH 79 (347)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHT-TCEEEEEECCCSTTHHHHHHHHHTTCCCEEE-ECCTTCHHHHHHHHHHHCCSEEEE
T ss_pred cEEEEeCCCchhHHHHHHHHHhC-CCEEEEEeCCCccCchhhhhhhccCCceEEE-EcCCCCHHHHHHHHhccCCCEEEE
Confidence 689999965 4556788888876 88887775321 1110 00112223 568888888888887767999997
No 144
>1uay_A Type II 3-hydroxyacyl-COA dehydrogenase; beta oxidation, fatty acid, structural genomi structural genomics/proteomics initiative, RSGI; HET: ADN; 1.40A {Thermus thermophilus} SCOP: c.2.1.2
Probab=75.18 E-value=7.2 Score=35.42 Aligned_cols=66 Identities=24% Similarity=0.185 Sum_probs=44.2
Q ss_pred ccEEEEEeCC-hhHHHHHHHHHhcCCCcEEEEecCCCCCcCCCCCccccCCCCCCHHHHHHHHHHc----CCcEEEE
Q 010065 82 RVVVLVIGGG-GREHALCYALKRSHSCDAVFCAPGNAGISNSGDATCIPDLDVLDGDAVISFCRKW----SVGLVVV 153 (519)
Q Consensus 82 ~~~vliiG~g-~~~~~l~~~l~~~~g~~~v~~~~~~~~~~~~~~~~~v~~~d~~d~~~l~~~~~~~----~id~Vi~ 153 (519)
.++++|+|++ +....+++.|.+. |++++.++.+.. . .....+ ..|..|.+.+.+++++. ++|.++.
T Consensus 2 ~k~vlVtGasggiG~~la~~l~~~-G~~V~~~~r~~~-~---~~~~~~-~~D~~~~~~~~~~~~~~~~~~~~d~li~ 72 (242)
T 1uay_A 2 ERSALVTGGASGLGRAAALALKAR-GYRVVVLDLRRE-G---EDLIYV-EGDVTREEDVRRAVARAQEEAPLFAVVS 72 (242)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHH-TCEEEEEESSCC-S---SSSEEE-ECCTTCHHHHHHHHHHHHHHSCEEEEEE
T ss_pred CCEEEEeCCCChHHHHHHHHHHHC-CCEEEEEccCcc-c---cceEEE-eCCCCCHHHHHHHHHHHHhhCCceEEEE
Confidence 3679999976 3456788888877 888887754322 1 111223 57888877777666543 7898887
No 145
>1udb_A Epimerase, UDP-galactose-4-epimerase; isomerase; HET: NAD UFG; 1.65A {Escherichia coli} SCOP: c.2.1.2 PDB: 1lrj_A* 1nai_A* 1uda_A* 1nah_A* 1xel_A* 1kvq_A* 1kvs_A* 1udc_A* 2udp_A* 1a9z_A* 1kvt_A* 1kvr_A* 1lrk_A* 1lrl_A* 1kvu_A* 1a9y_A*
Probab=75.16 E-value=9.8 Score=36.62 Aligned_cols=69 Identities=19% Similarity=0.259 Sum_probs=44.9
Q ss_pred cEEEEEeCCh-hHHHHHHHHHhcCCCcEEEEecCCCCC-cC--------CCCCccccCCCCCCHHHHHHHHHHcCCcEEE
Q 010065 83 VVVLVIGGGG-REHALCYALKRSHSCDAVFCAPGNAGI-SN--------SGDATCIPDLDVLDGDAVISFCRKWSVGLVV 152 (519)
Q Consensus 83 ~~vliiG~g~-~~~~l~~~l~~~~g~~~v~~~~~~~~~-~~--------~~~~~~v~~~d~~d~~~l~~~~~~~~id~Vi 152 (519)
|+|||+|+.+ ....++..|.+. |++++.++...... .. ......+ ..|..|.+.+.++++..++|+||
T Consensus 1 m~vlVTGatG~iG~~l~~~L~~~-G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~Dl~~~~~~~~~~~~~~~D~vi 78 (338)
T 1udb_A 1 MRVLVTGGSGYIGSHTCVQLLQN-GHDVIILDNLCNSKRSVLPVIERLGGKHPTFV-EGDIRNEALMTEILHDHAIDTVI 78 (338)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHT-TCEEEEEECCSSCCTTHHHHHHHHHTSCCEEE-ECCTTCHHHHHHHHHHTTCSEEE
T ss_pred CEEEEECCCCHHHHHHHHHHHHC-CCEEEEEecCCCcchhHHHHHHhhcCCcceEE-EccCCCHHHHHHHhhccCCCEEE
Confidence 5799999754 456688888877 88887765321110 00 0011223 56888888888888776899999
Q ss_pred E
Q 010065 153 V 153 (519)
Q Consensus 153 ~ 153 (519)
-
T Consensus 79 h 79 (338)
T 1udb_A 79 H 79 (338)
T ss_dssp E
T ss_pred E
Confidence 7
No 146
>2axq_A Saccharopine dehydrogenase; rossmann fold variant, saccharopine reductase fold (domain II), alpha/beta protein; 1.70A {Saccharomyces cerevisiae}
Probab=75.00 E-value=6.2 Score=40.60 Aligned_cols=116 Identities=15% Similarity=0.120 Sum_probs=62.5
Q ss_pred ccEEEEEeCChhHHHHHHHHHhcCCCcEEEEecCCCCCcCC---CCCccccCCCCCCHHHHHHHHHHcCCcEEEECCChh
Q 010065 82 RVVVLVIGGGGREHALCYALKRSHSCDAVFCAPGNAGISNS---GDATCIPDLDVLDGDAVISFCRKWSVGLVVVGPEAP 158 (519)
Q Consensus 82 ~~~vliiG~g~~~~~l~~~l~~~~g~~~v~~~~~~~~~~~~---~~~~~v~~~d~~d~~~l~~~~~~~~id~Vi~g~E~~ 158 (519)
.++|+|+|+|+....++..|.+..++++++++.+....... .....+ .+|..+.+.+.+.++ ++|+|+...-..
T Consensus 23 ~k~VlIiGAGgiG~aia~~L~~~~g~~V~v~~R~~~ka~~la~~~~~~~~-~~D~~d~~~l~~~l~--~~DvVIn~tp~~ 99 (467)
T 2axq_A 23 GKNVLLLGSGFVAQPVIDTLAANDDINVTVACRTLANAQALAKPSGSKAI-SLDVTDDSALDKVLA--DNDVVISLIPYT 99 (467)
T ss_dssp CEEEEEECCSTTHHHHHHHHHTSTTEEEEEEESSHHHHHHHHGGGTCEEE-ECCTTCHHHHHHHHH--TSSEEEECSCGG
T ss_pred CCEEEEECChHHHHHHHHHHHhCCCCeEEEEECCHHHHHHHHHhcCCcEE-EEecCCHHHHHHHHc--CCCEEEECCchh
Confidence 57899999998777788888876566655554331110000 011112 356677777766664 689999843222
Q ss_pred hHHHHHHHHHHCCCCeeCCcHHHHHHhcCHHHHHHHHHHcCCCCCC
Q 010065 159 LVSGLANKLVKAGIPTFGPSSEAAALEGSKNFMKNLCDKYGIPTAK 204 (519)
Q Consensus 159 ~~~~~a~~le~~gip~~g~~~~~~~~~~dK~~~k~~l~~~Gi~~p~ 204 (519)
....+.+.+-..|..++-.....- +...+.+.++++|+....
T Consensus 100 ~~~~v~~a~l~~g~~vvd~~~~~p----~~~~Ll~~Ak~aGv~~i~ 141 (467)
T 2axq_A 100 FHPNVVKSAIRTKTDVVTSSYISP----ALRELEPEIVKAGITVMN 141 (467)
T ss_dssp GHHHHHHHHHHHTCEEEECSCCCH----HHHHHHHHHHHHTCEEEC
T ss_pred hhHHHHHHHHhcCCEEEEeecCCH----HHHHHHHHHHHcCCEEEe
Confidence 212233334445666653321000 013344566777875433
No 147
>2fwm_X 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; enterobactin, rossman fold, chorismate metabolism, short-CHA oxidoreductase, tetramer; 2.00A {Escherichia coli}
Probab=74.92 E-value=12 Score=34.55 Aligned_cols=68 Identities=19% Similarity=0.187 Sum_probs=44.7
Q ss_pred ccEEEEEeCC-hhHHHHHHHHHhcCCCcEEEEecCCCCCcCCCCCccccCCCCCCHHHHHHHHHHc-----CCcEEEE
Q 010065 82 RVVVLVIGGG-GREHALCYALKRSHSCDAVFCAPGNAGISNSGDATCIPDLDVLDGDAVISFCRKW-----SVGLVVV 153 (519)
Q Consensus 82 ~~~vliiG~g-~~~~~l~~~l~~~~g~~~v~~~~~~~~~~~~~~~~~v~~~d~~d~~~l~~~~~~~-----~id~Vi~ 153 (519)
.++++|+|++ +....+++.|.+. |.+++.++.+.. ..... ...+ ..|..|.+.+.+++++. ++|.++.
T Consensus 7 ~k~vlVTGas~giG~~ia~~l~~~-G~~V~~~~r~~~-~~~~~-~~~~-~~D~~d~~~~~~~~~~~~~~~g~id~lv~ 80 (250)
T 2fwm_X 7 GKNVWVTGAGKGIGYATALAFVEA-GAKVTGFDQAFT-QEQYP-FATE-VMDVADAAQVAQVCQRLLAETERLDALVN 80 (250)
T ss_dssp TCEEEEESTTSHHHHHHHHHHHHT-TCEEEEEESCCC-SSCCS-SEEE-ECCTTCHHHHHHHHHHHHHHCSCCCEEEE
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHC-CCEEEEEeCchh-hhcCC-ceEE-EcCCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence 4689999976 4556788888887 888877754321 11111 1222 56888877777666542 7999997
No 148
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=74.66 E-value=6.9 Score=33.04 Aligned_cols=86 Identities=8% Similarity=-0.057 Sum_probs=50.0
Q ss_pred ccEEEEEeCChhHHHHHHHHHhcCCCcEEEEecCCCC----CcC--CCCCccccCCCCCCHHHHHHHHHHcCCcEEEEC-
Q 010065 82 RVVVLVIGGGGREHALCYALKRSHSCDAVFCAPGNAG----ISN--SGDATCIPDLDVLDGDAVISFCRKWSVGLVVVG- 154 (519)
Q Consensus 82 ~~~vliiG~g~~~~~l~~~l~~~~g~~~v~~~~~~~~----~~~--~~~~~~v~~~d~~d~~~l~~~~~~~~id~Vi~g- 154 (519)
+++++|+|.|.....++..|.+. |+++++++.+... ... ......+ ..|..+.+.+.+. .-.+.|.|+..
T Consensus 3 ~~~vlI~G~G~vG~~la~~L~~~-g~~V~vid~~~~~~~~~~~~~~~~~~~~i-~gd~~~~~~l~~a-~i~~ad~vi~~~ 79 (153)
T 1id1_A 3 KDHFIVCGHSILAINTILQLNQR-GQNVTVISNLPEDDIKQLEQRLGDNADVI-PGDSNDSSVLKKA-GIDRCRAILALS 79 (153)
T ss_dssp CSCEEEECCSHHHHHHHHHHHHT-TCCEEEEECCCHHHHHHHHHHHCTTCEEE-ESCTTSHHHHHHH-TTTTCSEEEECS
T ss_pred CCcEEEECCCHHHHHHHHHHHHC-CCCEEEEECCChHHHHHHHHhhcCCCeEE-EcCCCCHHHHHHc-ChhhCCEEEEec
Confidence 46799999997777788888876 8999888764211 000 0011222 4566776655443 22467888874
Q ss_pred CChhhHHHHHHHHHHC
Q 010065 155 PEAPLVSGLANKLVKA 170 (519)
Q Consensus 155 ~E~~~~~~~a~~le~~ 170 (519)
+.+.....++..+..+
T Consensus 80 ~~d~~n~~~~~~a~~~ 95 (153)
T 1id1_A 80 DNDADNAFVVLSAKDM 95 (153)
T ss_dssp SCHHHHHHHHHHHHHH
T ss_pred CChHHHHHHHHHHHHH
Confidence 4444433344444443
No 149
>1e6u_A GDP-fucose synthetase; epimerase/reductase, SDR, RED; HET: NAP; 1.45A {Escherichia coli} SCOP: c.2.1.2 PDB: 1e7q_A* 1bsv_A* 1fxs_A* 1gfs_A 1e7s_A* 1bws_A* 1e7r_A*
Probab=74.64 E-value=6.1 Score=37.75 Aligned_cols=58 Identities=21% Similarity=0.244 Sum_probs=41.3
Q ss_pred ccEEEEEeCCh-hHHHHHHHHHhcCCCcEEEEecCCCCCcCCCCCccccCCCCCCHHHHHHHHHHcCCcEEEE
Q 010065 82 RVVVLVIGGGG-REHALCYALKRSHSCDAVFCAPGNAGISNSGDATCIPDLDVLDGDAVISFCRKWSVGLVVV 153 (519)
Q Consensus 82 ~~~vliiG~g~-~~~~l~~~l~~~~g~~~v~~~~~~~~~~~~~~~~~v~~~d~~d~~~l~~~~~~~~id~Vi~ 153 (519)
+|+|||+|+.| ....++..|.+. |++++.+... . ..|..|.+.+.+++++.++|+||-
T Consensus 3 ~~~ilVtGatG~iG~~l~~~L~~~-g~~v~~~~r~------------~-~~D~~d~~~~~~~~~~~~~d~vih 61 (321)
T 1e6u_A 3 KQRVFIAGHRGMVGSAIRRQLEQR-GDVELVLRTR------------D-ELNLLDSRAVHDFFASERIDQVYL 61 (321)
T ss_dssp CEEEEEETTTSHHHHHHHHHHTTC-TTEEEECCCT------------T-TCCTTCHHHHHHHHHHHCCSEEEE
T ss_pred CCEEEEECCCcHHHHHHHHHHHhC-CCeEEEEecC------------c-cCCccCHHHHHHHHHhcCCCEEEE
Confidence 47899999754 456678888766 8876654221 1 346677788888887778999997
No 150
>3m2t_A Probable dehydrogenase; PSI, SGXNY, structural genomics, protein structure initiative; HET: NAD; 2.30A {Chromobacterium violaceum}
Probab=74.62 E-value=2.6 Score=41.69 Aligned_cols=116 Identities=14% Similarity=0.102 Sum_probs=61.6
Q ss_pred CccEEEEEeCChhHHH-HHHHHHhcCCCcEEEEecCCCCC-cCCCCCcccc-CCCCCCHHHHHHHHHHcCCcEEEECCCh
Q 010065 81 QRVVVLVIGGGGREHA-LCYALKRSHSCDAVFCAPGNAGI-SNSGDATCIP-DLDVLDGDAVISFCRKWSVGLVVVGPEA 157 (519)
Q Consensus 81 ~~~~vliiG~g~~~~~-l~~~l~~~~g~~~v~~~~~~~~~-~~~~~~~~v~-~~d~~d~~~l~~~~~~~~id~Vi~g~E~ 157 (519)
++++|.|||.|..... .+..+.+..+++++.+.+.++.. .... ..+. ..-..+.+++ +...++|+|+...-.
T Consensus 4 ~~~rigiIG~G~~g~~~~~~~l~~~~~~~l~av~d~~~~~~~~~a--~~~~~~~~~~~~~~l---l~~~~vD~V~i~tp~ 78 (359)
T 3m2t_A 4 SLIKVGLVGIGAQMQENLLPSLLQMQDIRIVAACDSDLERARRVH--RFISDIPVLDNVPAM---LNQVPLDAVVMAGPP 78 (359)
T ss_dssp CCEEEEEECCSHHHHHTHHHHHHTCTTEEEEEEECSSHHHHGGGG--GTSCSCCEESSHHHH---HHHSCCSEEEECSCH
T ss_pred CcceEEEECCCHHHHHHHHHHHHhCCCcEEEEEEcCCHHHHHHHH--HhcCCCcccCCHHHH---hcCCCCCEEEEcCCc
Confidence 3579999999964432 46667666577776554332211 1111 1110 0012345554 456789999986554
Q ss_pred hhHHHHHHHHHHCCCCeeCCcHHHHHHhcCHHHHHHHHHHcCCCC
Q 010065 158 PLVSGLANKLVKAGIPTFGPSSEAAALEGSKNFMKNLCDKYGIPT 202 (519)
Q Consensus 158 ~~~~~~a~~le~~gip~~g~~~~~~~~~~dK~~~k~~l~~~Gi~~ 202 (519)
..-..++..+-+.|.+++.-.|-+.... +=..+.+++++.|+..
T Consensus 79 ~~H~~~~~~al~aGkhVl~EKPla~~~~-e~~~l~~~a~~~g~~~ 122 (359)
T 3m2t_A 79 QLHFEMGLLAMSKGVNVFVEKPPCATLE-ELETLIDAARRSDVVS 122 (359)
T ss_dssp HHHHHHHHHHHHTTCEEEECSCSCSSHH-HHHHHHHHHHHHTCCE
T ss_pred HHHHHHHHHHHHCCCeEEEECCCcCCHH-HHHHHHHHHHHcCCEE
Confidence 4433455556667888764333222111 1123445677777653
No 151
>3kux_A Putative oxidoreductase; oxidoreductase family, csgid, structural genomics, center FO structural genomics of infectious diseases; HET: MSE; 2.75A {Yersinia pestis}
Probab=74.59 E-value=2.7 Score=41.35 Aligned_cols=143 Identities=16% Similarity=0.155 Sum_probs=71.8
Q ss_pred CCCccEEEEEeCChhHHH-HHHHHHhcCCCcEEEEecCCCCCcCCCCCccccCCCCCCHHHHHHHHHHcCCcEEEECCCh
Q 010065 79 AGQRVVVLVIGGGGREHA-LCYALKRSHSCDAVFCAPGNAGISNSGDATCIPDLDVLDGDAVISFCRKWSVGLVVVGPEA 157 (519)
Q Consensus 79 ~~~~~~vliiG~g~~~~~-l~~~l~~~~g~~~v~~~~~~~~~~~~~~~~~v~~~d~~d~~~l~~~~~~~~id~Vi~g~E~ 157 (519)
|.++++|.|||.|..... .+..+.+..+++++.+.+.++..... ..... .-..|.+++ +...++|+|+.....
T Consensus 4 M~~~~rvgiiG~G~~g~~~~~~~~~~~~~~~l~av~d~~~~~~~~-~~~~~--~~~~~~~~l---l~~~~vD~V~i~tp~ 77 (352)
T 3kux_A 4 MADKIKVGLLGYGYASKTFHAPLIMGTPGLELAGVSSSDASKVHA-DWPAI--PVVSDPQML---FNDPSIDLIVIPTPN 77 (352)
T ss_dssp TTCCEEEEEECCSHHHHHTHHHHHHTSTTEEEEEEECSCHHHHHT-TCSSC--CEESCHHHH---HHCSSCCEEEECSCT
T ss_pred ccCCceEEEECCCHHHHHHHHHHHhhCCCcEEEEEECCCHHHHHh-hCCCC--ceECCHHHH---hcCCCCCEEEEeCCh
Confidence 345689999999965433 35556655577776554333211110 00000 112345555 445679999985433
Q ss_pred hhHHHHHHHHHHCCCCeeCCcHHHHHHhcCHHHHHHHHHHcCCCCCCeee--cC-CHHHHHHHHH--HhCCCEEEE
Q 010065 158 PLVSGLANKLVKAGIPTFGPSSEAAALEGSKNFMKNLCDKYGIPTAKYKT--FT-DPNAAKQYIQ--EEGAPIVVK 228 (519)
Q Consensus 158 ~~~~~~a~~le~~gip~~g~~~~~~~~~~dK~~~k~~l~~~Gi~~p~~~~--v~-~~~~~~~~~~--~~g~P~VvK 228 (519)
..-..++..+-+.|.+++.-.|-+... .+=..+.+++++.|+..--... .. ....+.+.++ .+|-+..+.
T Consensus 78 ~~H~~~~~~al~aGkhV~~EKPla~~~-~e~~~l~~~a~~~g~~~~v~~~~r~~p~~~~~~~~i~~g~iG~i~~~~ 152 (352)
T 3kux_A 78 DTHFPLAQSALAAGKHVVVDKPFTVTL-SQANALKEHADDAGLLLSVFHNRRWDSDFLTLKTLLAEGSLGNVVYFE 152 (352)
T ss_dssp TTHHHHHHHHHHTTCEEEECSSCCSCH-HHHHHHHHHHHHTTCCEEECCGGGGCHHHHHHHHHHHHTTTCSEEEEE
T ss_pred HHHHHHHHHHHHCCCcEEEECCCcCCH-HHHHHHHHHHHHcCCeEEEEeecccCHHHHHHHHHHhcCCCCceEEEE
Confidence 332344555566788776433322211 1123455677788875421111 11 1234555554 466565554
No 152
>3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus}
Probab=74.59 E-value=6.2 Score=37.61 Aligned_cols=66 Identities=17% Similarity=0.148 Sum_probs=42.4
Q ss_pred ccEEEEEeCCh-hHHHHHHHHHhcCCCcEEEEecCCCCCcCCCCCccccCCCCCCHHHHHHHHHHcCCcEEEE
Q 010065 82 RVVVLVIGGGG-REHALCYALKRSHSCDAVFCAPGNAGISNSGDATCIPDLDVLDGDAVISFCRKWSVGLVVV 153 (519)
Q Consensus 82 ~~~vliiG~g~-~~~~l~~~l~~~~g~~~v~~~~~~~~~~~~~~~~~v~~~d~~d~~~l~~~~~~~~id~Vi~ 153 (519)
+++|||+|+.| ....++..|.+. |++++.++....... ......+ ..|.. .+.+.++++ ++|.||-
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~~-g~~V~~~~r~~~~~~-~~~~~~~-~~Dl~-~~~~~~~~~--~~d~Vih 68 (311)
T 3m2p_A 2 SLKIAVTGGTGFLGQYVVESIKND-GNTPIILTRSIGNKA-INDYEYR-VSDYT-LEDLINQLN--DVDAVVH 68 (311)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHT-TCEEEEEESCCC------CCEEE-ECCCC-HHHHHHHTT--TCSEEEE
T ss_pred CCEEEEECCCcHHHHHHHHHHHhC-CCEEEEEeCCCCccc-CCceEEE-Ecccc-HHHHHHhhc--CCCEEEE
Confidence 47899999654 556788888877 888877765421111 1122233 56777 777776665 7999997
No 153
>3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum}
Probab=74.28 E-value=8.1 Score=35.70 Aligned_cols=66 Identities=15% Similarity=0.143 Sum_probs=43.8
Q ss_pred ccEEEEEeCC-hhHHHHHHHHHhcCCCcEEEEecCCCCCcCCCCCccccCCCCCCHHHHHHHHHHc-----CCcEEEE
Q 010065 82 RVVVLVIGGG-GREHALCYALKRSHSCDAVFCAPGNAGISNSGDATCIPDLDVLDGDAVISFCRKW-----SVGLVVV 153 (519)
Q Consensus 82 ~~~vliiG~g-~~~~~l~~~l~~~~g~~~v~~~~~~~~~~~~~~~~~v~~~d~~d~~~l~~~~~~~-----~id~Vi~ 153 (519)
.++++|+|++ +....+++.|.+. |.+++.++.+..... ...+ .+|..|.+.+.+++++. ++|+++.
T Consensus 22 ~k~vlITGas~gIG~~la~~l~~~-G~~V~~~~r~~~~~~----~~~~-~~d~~d~~~v~~~~~~~~~~~g~iD~li~ 93 (251)
T 3orf_A 22 SKNILVLGGSGALGAEVVKFFKSK-SWNTISIDFRENPNA----DHSF-TIKDSGEEEIKSVIEKINSKSIKVDTFVC 93 (251)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHT-TCEEEEEESSCCTTS----SEEE-ECSCSSHHHHHHHHHHHHTTTCCEEEEEE
T ss_pred CCEEEEECCCCHHHHHHHHHHHHC-CCEEEEEeCCccccc----ccce-EEEeCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence 3679999976 4567788999887 898877764422111 1223 45677777776666553 6899887
No 154
>1kew_A RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fold, lyase; HET: TYD NAD; 1.80A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1g1a_A* 1keu_A* 1bxk_A*
Probab=74.26 E-value=8.3 Score=37.48 Aligned_cols=70 Identities=11% Similarity=0.124 Sum_probs=45.3
Q ss_pred cEEEEEeCC-hhHHHHHHHHHhcCCCcEEEEecCCC--CCcCCC------CCccccCCCCCCHHHHHHHHHHcCCcEEEE
Q 010065 83 VVVLVIGGG-GREHALCYALKRSHSCDAVFCAPGNA--GISNSG------DATCIPDLDVLDGDAVISFCRKWSVGLVVV 153 (519)
Q Consensus 83 ~~vliiG~g-~~~~~l~~~l~~~~g~~~v~~~~~~~--~~~~~~------~~~~v~~~d~~d~~~l~~~~~~~~id~Vi~ 153 (519)
|+|||+|+. +....++..|.+..|++++.++.... ...... ....+ ..|..|.+.+.+++++.++|+||-
T Consensus 1 MkvlVTGasG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~-~~Dl~d~~~~~~~~~~~~~d~vih 79 (361)
T 1kew_A 1 MKILITGGAGFIGSAVVRHIIKNTQDTVVNIDKLTYAGNLESLSDISESNRYNFE-HADICDSAEITRIFEQYQPDAVMH 79 (361)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHHCSCEEEEEECCCTTCCGGGGTTTTTCTTEEEE-ECCTTCHHHHHHHHHHHCCSEEEE
T ss_pred CEEEEECCCchHhHHHHHHHHhcCCCeEEEEecCCCCCchhhhhhhhcCCCeEEE-ECCCCCHHHHHHHHhhcCCCEEEE
Confidence 579999975 45566788887754677777653221 111110 11222 568888888888887778999997
No 155
>2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP}
Probab=74.22 E-value=3.9 Score=37.57 Aligned_cols=64 Identities=20% Similarity=0.167 Sum_probs=42.5
Q ss_pred cEEEEEeCC-hhHHHHHHHHHhcCCCcEEEEecCCCCCcCCCCCccccCCCCCCHHHHHHHHHHc--CCcEEEE
Q 010065 83 VVVLVIGGG-GREHALCYALKRSHSCDAVFCAPGNAGISNSGDATCIPDLDVLDGDAVISFCRKW--SVGLVVV 153 (519)
Q Consensus 83 ~~vliiG~g-~~~~~l~~~l~~~~g~~~v~~~~~~~~~~~~~~~~~v~~~d~~d~~~l~~~~~~~--~id~Vi~ 153 (519)
++|+|+|++ +....++..|.+. |++++.++.+..... . .+ ..|..+.+.+.+++++. ++|.||.
T Consensus 2 k~vlVtGasg~iG~~l~~~L~~~-g~~V~~~~r~~~~~~---~--~~-~~D~~~~~~~~~~~~~~~~~~d~vi~ 68 (255)
T 2dkn_A 2 SVIAITGSASGIGAALKELLARA-GHTVIGIDRGQADIE---A--DL-STPGGRETAVAAVLDRCGGVLDGLVC 68 (255)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHT-TCEEEEEESSSSSEE---C--CT-TSHHHHHHHHHHHHHHHTTCCSEEEE
T ss_pred cEEEEeCCCcHHHHHHHHHHHhC-CCEEEEEeCChhHcc---c--cc-cCCcccHHHHHHHHHHcCCCccEEEE
Confidence 579999975 4566788888877 888877754321111 0 13 45656667777777665 8999997
No 156
>3oa2_A WBPB; oxidoreductase, sugar biosynthesis, dehydrogenase; HET: NAD; 1.50A {Pseudomonas aeruginosa}
Probab=73.97 E-value=6.8 Score=37.90 Aligned_cols=117 Identities=9% Similarity=-0.030 Sum_probs=62.5
Q ss_pred ccEEEEEeCCh-hHHHHHHHHHhcCCCcEEEEecCCCCCcCCCCCccccCC-CCCCHHHHHHHHH------HcCCcEEEE
Q 010065 82 RVVVLVIGGGG-REHALCYALKRSHSCDAVFCAPGNAGISNSGDATCIPDL-DVLDGDAVISFCR------KWSVGLVVV 153 (519)
Q Consensus 82 ~~~vliiG~g~-~~~~l~~~l~~~~g~~~v~~~~~~~~~~~~~~~~~v~~~-d~~d~~~l~~~~~------~~~id~Vi~ 153 (519)
+++|.|||.|+ .....+..+++. +.+.+.+.+.++...... ...+.. -..+.+++++... ..++|+|+.
T Consensus 3 mirvgiIG~gG~i~~~h~~~l~~~-~~~lvav~d~~~~~~~~~--~~~~~~~~~~~~~~ll~~~~~l~~~~~~~vD~V~I 79 (318)
T 3oa2_A 3 MKNFALIGAAGYIAPRHMRAIKDT-GNCLVSAYDINDSVGIID--SISPQSEFFTEFEFFLDHASNLKRDSATALDYVSI 79 (318)
T ss_dssp CCEEEEETTTSSSHHHHHHHHHHT-TCEEEEEECSSCCCGGGG--GTCTTCEEESSHHHHHHHHHHHTTSTTTSCCEEEE
T ss_pred ceEEEEECCCcHHHHHHHHHHHhC-CCEEEEEEcCCHHHHHHH--hhCCCCcEECCHHHHHHhhhhhhhccCCCCcEEEE
Confidence 57999999953 344456666665 777666654333221111 111001 1235677765432 457999998
Q ss_pred CCChhhHHHHHHHHHHCCCCeeCCcHHHHHHhcCHHHHHHHHHHcCCCC
Q 010065 154 GPEAPLVSGLANKLVKAGIPTFGPSSEAAALEGSKNFMKNLCDKYGIPT 202 (519)
Q Consensus 154 g~E~~~~~~~a~~le~~gip~~g~~~~~~~~~~dK~~~k~~l~~~Gi~~ 202 (519)
..-...-..++..+-+.|.+++.-.|-+... .+=..+.++.++.|+..
T Consensus 80 ~tP~~~H~~~~~~al~aGkhVl~EKPla~~~-~ea~~l~~~a~~~g~~~ 127 (318)
T 3oa2_A 80 CSPNYLHYPHIAAGLRLGCDVICEKPLVPTP-EMLDQLAVIERETDKRL 127 (318)
T ss_dssp CSCGGGHHHHHHHHHHTTCEEEECSSCCSCH-HHHHHHHHHHHHHTCCE
T ss_pred CCCcHHHHHHHHHHHHCCCeEEEECCCcCCH-HHHHHHHHHHHHhCCEE
Confidence 6554443345555667788876433322211 11223445666777654
No 157
>1sny_A Sniffer CG10964-PA; alpha and beta protein, rossmann fold, dinucleotide binding oxidoreductase; HET: NAP; 1.75A {Drosophila melanogaster} SCOP: c.2.1.2
Probab=73.62 E-value=3.3 Score=38.57 Aligned_cols=85 Identities=12% Similarity=0.095 Sum_probs=41.3
Q ss_pred CCCcccccCCCCCCCccEEEEEeCC-hhHHHHHHHHHhcCC---CcEEEEecCCCCCcCC-------CCCccccCCCCCC
Q 010065 67 SQPSVSVNAPTNAGQRVVVLVIGGG-GREHALCYALKRSHS---CDAVFCAPGNAGISNS-------GDATCIPDLDVLD 135 (519)
Q Consensus 67 ~e~~vS~~s~~~~~~~~~vliiG~g-~~~~~l~~~l~~~~g---~~~v~~~~~~~~~~~~-------~~~~~v~~~d~~d 135 (519)
.||+-|-..-....+.++++|+|++ +....+++.|.+. | ++++.++.+....... .....+ ..|..|
T Consensus 6 ~~~~~~~~~~~~~~~~k~vlITGasggIG~~la~~L~~~-G~~~~~V~~~~r~~~~~~~~~~l~~~~~~~~~~-~~Dl~~ 83 (267)
T 1sny_A 6 HHHHHSSGLVPRGSHMNSILITGCNRGLGLGLVKALLNL-PQPPQHLFTTCRNREQAKELEDLAKNHSNIHIL-EIDLRN 83 (267)
T ss_dssp --------------CCSEEEESCCSSHHHHHHHHHHHTS-SSCCSEEEEEESCTTSCHHHHHHHHHCTTEEEE-ECCTTC
T ss_pred cchhhcccccccCCCCCEEEEECCCCcHHHHHHHHHHhc-CCCCcEEEEEecChhhhHHHHHhhccCCceEEE-EecCCC
Confidence 3344433333333456789999866 3556788888877 7 7777765432211100 011122 456666
Q ss_pred HHHHHHHHHHc-------CCcEEEE
Q 010065 136 GDAVISFCRKW-------SVGLVVV 153 (519)
Q Consensus 136 ~~~l~~~~~~~-------~id~Vi~ 153 (519)
.+.+.+++++. ++|++|.
T Consensus 84 ~~~v~~~~~~~~~~~g~~~id~li~ 108 (267)
T 1sny_A 84 FDAYDKLVADIEGVTKDQGLNVLFN 108 (267)
T ss_dssp GGGHHHHHHHHHHHHGGGCCSEEEE
T ss_pred hHHHHHHHHHHHHhcCCCCccEEEE
Confidence 55554444322 6999987
No 158
>1vl0_A DTDP-4-dehydrorhamnose reductase, RFBD ortholog; structural joint center for structural genomics, JCSG, protein structu initiative; HET: NAI UNL; 2.05A {Clostridium acetobutylicum} SCOP: c.2.1.2
Probab=73.55 E-value=6.4 Score=37.05 Aligned_cols=57 Identities=21% Similarity=0.281 Sum_probs=41.5
Q ss_pred ccEEEEEeCCh-hHHHHHHHHHhcCCCcEEEEecCCCCCcCCCCCccccCCCCCCHHHHHHHHHHcCCcEEEE
Q 010065 82 RVVVLVIGGGG-REHALCYALKRSHSCDAVFCAPGNAGISNSGDATCIPDLDVLDGDAVISFCRKWSVGLVVV 153 (519)
Q Consensus 82 ~~~vliiG~g~-~~~~l~~~l~~~~g~~~v~~~~~~~~~~~~~~~~~v~~~d~~d~~~l~~~~~~~~id~Vi~ 153 (519)
.++|||+|+.| ....++..|.+. |++++.++.. ..|..|.+.+.++++..++|+||-
T Consensus 12 ~~~vlVtGatG~iG~~l~~~L~~~-g~~V~~~~r~--------------~~Dl~d~~~~~~~~~~~~~d~vih 69 (292)
T 1vl0_A 12 HMKILITGANGQLGREIQKQLKGK-NVEVIPTDVQ--------------DLDITNVLAVNKFFNEKKPNVVIN 69 (292)
T ss_dssp CEEEEEESTTSHHHHHHHHHHTTS-SEEEEEECTT--------------TCCTTCHHHHHHHHHHHCCSEEEE
T ss_pred cceEEEECCCChHHHHHHHHHHhC-CCeEEeccCc--------------cCCCCCHHHHHHHHHhcCCCEEEE
Confidence 47999999765 456678888776 8877665321 246667778877777668999997
No 159
>1db3_A GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lyase; 2.30A {Escherichia coli} SCOP: c.2.1.2
Probab=73.55 E-value=8.2 Score=37.73 Aligned_cols=69 Identities=13% Similarity=-0.010 Sum_probs=44.5
Q ss_pred cEEEEEeCC-hhHHHHHHHHHhcCCCcEEEEecCCCC-----CcCC--------CCCccccCCCCCCHHHHHHHHHHcCC
Q 010065 83 VVVLVIGGG-GREHALCYALKRSHSCDAVFCAPGNAG-----ISNS--------GDATCIPDLDVLDGDAVISFCRKWSV 148 (519)
Q Consensus 83 ~~vliiG~g-~~~~~l~~~l~~~~g~~~v~~~~~~~~-----~~~~--------~~~~~v~~~d~~d~~~l~~~~~~~~i 148 (519)
++|+|+|+. +....++..|.+. |++++.++..... .... .....+ ..|..|.+.+.++++..++
T Consensus 2 ~~vlVtGatG~iG~~l~~~L~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~Dl~d~~~~~~~~~~~~~ 79 (372)
T 1db3_A 2 KVALITGVTGQDGSYLAEFLLEK-GYEVHGIKRRASSFNTERVDHIYQDPHTCNPKFHLH-YGDLSDTSNLTRILREVQP 79 (372)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHT-TCEEEEECC---------------------CCEEEC-CCCSSCHHHHHHHHHHHCC
T ss_pred CEEEEECCCChHHHHHHHHHHHC-CCEEEEEECCCcccchHHHHHHhhccccCCCceEEE-ECCCCCHHHHHHHHHhcCC
Confidence 689999965 4556788888877 8887776533211 0000 011223 5688888888888887789
Q ss_pred cEEEE
Q 010065 149 GLVVV 153 (519)
Q Consensus 149 d~Vi~ 153 (519)
|.||-
T Consensus 80 d~vih 84 (372)
T 1db3_A 80 DEVYN 84 (372)
T ss_dssp SEEEE
T ss_pred CEEEE
Confidence 99987
No 160
>3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens}
Probab=73.39 E-value=12 Score=36.53 Aligned_cols=71 Identities=18% Similarity=0.236 Sum_probs=44.9
Q ss_pred CccEEEEEeCC-hhHHHHHHHHHhcCCCcEEEEecCCCCCcCC---------------CCCccccCCCCCCHHHHHHHHH
Q 010065 81 QRVVVLVIGGG-GREHALCYALKRSHSCDAVFCAPGNAGISNS---------------GDATCIPDLDVLDGDAVISFCR 144 (519)
Q Consensus 81 ~~~~vliiG~g-~~~~~l~~~l~~~~g~~~v~~~~~~~~~~~~---------------~~~~~v~~~d~~d~~~l~~~~~ 144 (519)
+.++++|+|++ +....++..|.+. |.++++++.+....... .....+ ..|..|.+.+.++++
T Consensus 44 ~gk~vlVTGas~GIG~aia~~La~~-Ga~Vvl~~r~~~~~~~l~~~l~~~~~~~~~~g~~~~~~-~~Dv~d~~~v~~~~~ 121 (346)
T 3kvo_A 44 AGCTVFITGASRGIGKAIALKAAKD-GANIVIAAKTAQPHPKLLGTIYTAAEEIEAVGGKALPC-IVDVRDEQQISAAVE 121 (346)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHTT-TCEEEEEESCCSCCSSSCCCHHHHHHHHHHTTCEEEEE-ECCTTCHHHHHHHHH
T ss_pred CCCEEEEeCCChHHHHHHHHHHHHC-CCEEEEEECChhhhhhhHHHHHHHHHHHHhcCCeEEEE-EccCCCHHHHHHHHH
Confidence 45789999976 4566788888877 89888776442211100 001112 468888777666665
Q ss_pred Hc-----CCcEEEE
Q 010065 145 KW-----SVGLVVV 153 (519)
Q Consensus 145 ~~-----~id~Vi~ 153 (519)
+. ++|++|.
T Consensus 122 ~~~~~~g~iDilVn 135 (346)
T 3kvo_A 122 KAIKKFGGIDILVN 135 (346)
T ss_dssp HHHHHHSCCCEEEE
T ss_pred HHHHHcCCCCEEEE
Confidence 43 7898887
No 161
>3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile}
Probab=73.23 E-value=10 Score=35.78 Aligned_cols=71 Identities=23% Similarity=0.283 Sum_probs=43.6
Q ss_pred CccEEEEEeCC-hhHHHHHHHHHhcCCCcEEEEecCCCCCcCC---------------CCCccccCCCCCCHHHHHHHHH
Q 010065 81 QRVVVLVIGGG-GREHALCYALKRSHSCDAVFCAPGNAGISNS---------------GDATCIPDLDVLDGDAVISFCR 144 (519)
Q Consensus 81 ~~~~vliiG~g-~~~~~l~~~l~~~~g~~~v~~~~~~~~~~~~---------------~~~~~v~~~d~~d~~~l~~~~~ 144 (519)
+.++++|+|++ +....+++.|.+. |.+++.++.+....... .....+ ..|..|.+.+.++++
T Consensus 8 ~~k~vlVTGas~GIG~aia~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~Dv~~~~~v~~~~~ 85 (285)
T 3sc4_A 8 RGKTMFISGGSRGIGLAIAKRVAAD-GANVALVAKSAEPHPKLPGTIYTAAKEIEEAGGQALPI-VGDIRDGDAVAAAVA 85 (285)
T ss_dssp TTCEEEEESCSSHHHHHHHHHHHTT-TCEEEEEESCCSCCSSSCCCHHHHHHHHHHHTSEEEEE-ECCTTSHHHHHHHHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHC-CCEEEEEECChhhhhhhhHHHHHHHHHHHhcCCcEEEE-ECCCCCHHHHHHHHH
Confidence 35789999976 4566788898877 89887776443211110 001112 457777666666555
Q ss_pred Hc-----CCcEEEE
Q 010065 145 KW-----SVGLVVV 153 (519)
Q Consensus 145 ~~-----~id~Vi~ 153 (519)
+. ++|++|.
T Consensus 86 ~~~~~~g~id~lvn 99 (285)
T 3sc4_A 86 KTVEQFGGIDICVN 99 (285)
T ss_dssp HHHHHHSCCSEEEE
T ss_pred HHHHHcCCCCEEEE
Confidence 43 6888886
No 162
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=72.52 E-value=6.2 Score=32.87 Aligned_cols=109 Identities=10% Similarity=0.040 Sum_probs=59.4
Q ss_pred ccEEEEEeCChhHHHHHHHHHhcCCCcEEEEecCCCCCcCC--CCCccccCCCCCCHHHHHHHHHHcCCcEEEEC-CChh
Q 010065 82 RVVVLVIGGGGREHALCYALKRSHSCDAVFCAPGNAGISNS--GDATCIPDLDVLDGDAVISFCRKWSVGLVVVG-PEAP 158 (519)
Q Consensus 82 ~~~vliiG~g~~~~~l~~~l~~~~g~~~v~~~~~~~~~~~~--~~~~~v~~~d~~d~~~l~~~~~~~~id~Vi~g-~E~~ 158 (519)
+.+|+|+|.|.....+++.|.+. |+++++++.+....... .....+ ..|..+.+.+.+ +.-.+.|+|+.. +++.
T Consensus 7 ~~~viIiG~G~~G~~la~~L~~~-g~~v~vid~~~~~~~~~~~~g~~~i-~gd~~~~~~l~~-a~i~~ad~vi~~~~~~~ 83 (140)
T 3fwz_A 7 CNHALLVGYGRVGSLLGEKLLAS-DIPLVVIETSRTRVDELRERGVRAV-LGNAANEEIMQL-AHLECAKWLILTIPNGY 83 (140)
T ss_dssp CSCEEEECCSHHHHHHHHHHHHT-TCCEEEEESCHHHHHHHHHTTCEEE-ESCTTSHHHHHH-TTGGGCSEEEECCSCHH
T ss_pred CCCEEEECcCHHHHHHHHHHHHC-CCCEEEEECCHHHHHHHHHcCCCEE-ECCCCCHHHHHh-cCcccCCEEEEECCChH
Confidence 46899999997777889999876 89998887542111000 011122 346666555433 223467888873 4443
Q ss_pred hHHHHHHHHHHC--CCCeeCCcHHHHHHhcCHHHHHHHHHHcCCC
Q 010065 159 LVSGLANKLVKA--GIPTFGPSSEAAALEGSKNFMKNLCDKYGIP 201 (519)
Q Consensus 159 ~~~~~a~~le~~--gip~~g~~~~~~~~~~dK~~~k~~l~~~Gi~ 201 (519)
....+...+..+ +++++ ....|.... +.|++.|+.
T Consensus 84 ~n~~~~~~a~~~~~~~~ii-------ar~~~~~~~-~~l~~~G~d 120 (140)
T 3fwz_A 84 EAGEIVASARAKNPDIEII-------ARAHYDDEV-AYITERGAN 120 (140)
T ss_dssp HHHHHHHHHHHHCSSSEEE-------EEESSHHHH-HHHHHTTCS
T ss_pred HHHHHHHHHHHHCCCCeEE-------EEECCHHHH-HHHHHCCCC
Confidence 322233333332 33333 233444333 566777765
No 163
>2z2v_A Hypothetical protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii} PDB: 3a63_A* 3abi_A*
Probab=72.46 E-value=6.8 Score=38.85 Aligned_cols=114 Identities=17% Similarity=0.175 Sum_probs=65.5
Q ss_pred ccEEEEEeCChhHHHHHHHHHhcCCCcEEEEecCCCCCcCCC-CCccccCCCCCCHHHHHHHHHHcCCcEEEECCChhhH
Q 010065 82 RVVVLVIGGGGREHALCYALKRSHSCDAVFCAPGNAGISNSG-DATCIPDLDVLDGDAVISFCRKWSVGLVVVGPEAPLV 160 (519)
Q Consensus 82 ~~~vliiG~g~~~~~l~~~l~~~~g~~~v~~~~~~~~~~~~~-~~~~v~~~d~~d~~~l~~~~~~~~id~Vi~g~E~~~~ 160 (519)
.++|+|+|+|.....++..|.+. .++.+.+.+........ ....+ .+|..+.+.+.++++ +.|+|+...-...-
T Consensus 16 ~~~v~IiGaG~iG~~ia~~L~~~--~~V~V~~R~~~~a~~la~~~~~~-~~d~~~~~~l~~ll~--~~DvVIn~~P~~~~ 90 (365)
T 2z2v_A 16 HMKVLILGAGNIGRAIAWDLKDE--FDVYIGDVNNENLEKVKEFATPL-KVDASNFDKLVEVMK--EFELVIGALPGFLG 90 (365)
T ss_dssp CCEEEEECCSHHHHHHHHHHTTT--SEEEEEESCHHHHHHHTTTSEEE-ECCTTCHHHHHHHHT--TCSCEEECCCHHHH
T ss_pred CCeEEEEcCCHHHHHHHHHHHcC--CeEEEEECCHHHHHHHHhhCCeE-EEecCCHHHHHHHHh--CCCEEEECCChhhh
Confidence 47999999998777788888765 55444433211111111 11112 356667777777765 57889885333332
Q ss_pred HHHHHHHHHCCCCeeCCcHHHHHHhcCHHHHHHHHHHcCCCCCC
Q 010065 161 SGLANKLVKAGIPTFGPSSEAAALEGSKNFMKNLCDKYGIPTAK 204 (519)
Q Consensus 161 ~~~a~~le~~gip~~g~~~~~~~~~~dK~~~k~~l~~~Gi~~p~ 204 (519)
..+.+.+-+.|..|+-.+.. ..+=..+.+.++++|+....
T Consensus 91 ~~v~~a~l~~G~~~vD~s~~----~~~~~~l~~~Ak~aG~~~l~ 130 (365)
T 2z2v_A 91 FKSIKAAIKSKVDMVDVSFM----PENPLELRDEAEKAQVTIVF 130 (365)
T ss_dssp HHHHHHHHHTTCCEEECCCC----SSCGGGGHHHHHHTTCEEEC
T ss_pred HHHHHHHHHhCCeEEEccCC----cHHHHHHHHHHHHcCCEEEE
Confidence 23555566788888743321 11112455678888987644
No 164
>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}
Probab=72.29 E-value=5.2 Score=37.30 Aligned_cols=71 Identities=20% Similarity=0.218 Sum_probs=46.1
Q ss_pred CccEEEEEeC-C-hhHHHHHHHHHhcCCCcEEEEecCCCCCc-------CC--CCCccccCCCCCCHHHHHHHHHHc---
Q 010065 81 QRVVVLVIGG-G-GREHALCYALKRSHSCDAVFCAPGNAGIS-------NS--GDATCIPDLDVLDGDAVISFCRKW--- 146 (519)
Q Consensus 81 ~~~~vliiG~-g-~~~~~l~~~l~~~~g~~~v~~~~~~~~~~-------~~--~~~~~v~~~d~~d~~~l~~~~~~~--- 146 (519)
+.++++|+|+ | +....+++.|.+. |.++++++.+..... .. .....+ ..|..|.+.+.+++++.
T Consensus 21 ~~k~vlITGasg~GIG~~~a~~l~~~-G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~-~~Dl~~~~~v~~~~~~~~~~ 98 (266)
T 3o38_A 21 KGKVVLVTAAAGTGIGSTTARRALLE-GADVVISDYHERRLGETRDQLADLGLGRVEAV-VCDVTSTEAVDALITQTVEK 98 (266)
T ss_dssp TTCEEEESSCSSSSHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHTTCSSCEEEE-ECCTTCHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCCCchHHHHHHHHHHC-CCEEEEecCCHHHHHHHHHHHHhcCCCceEEE-EeCCCCHHHHHHHHHHHHHH
Confidence 4578999998 5 5777889999887 898877754311100 00 111223 57888877776666543
Q ss_pred --CCcEEEE
Q 010065 147 --SVGLVVV 153 (519)
Q Consensus 147 --~id~Vi~ 153 (519)
++|++|.
T Consensus 99 ~g~id~li~ 107 (266)
T 3o38_A 99 AGRLDVLVN 107 (266)
T ss_dssp HSCCCEEEE
T ss_pred hCCCcEEEE
Confidence 7999987
No 165
>1gy8_A UDP-galactose 4-epimerase; oxidoreductase; HET: NAD UDP; 2.0A {Trypanosoma brucei} SCOP: c.2.1.2 PDB: 2cnb_A*
Probab=72.16 E-value=7.5 Score=38.44 Aligned_cols=70 Identities=21% Similarity=0.116 Sum_probs=46.0
Q ss_pred ccEEEEEeCC-hhHHHHHHHHH-hcCCCcEEEEecCCCCC---------cCC-------------CC---CccccCCCCC
Q 010065 82 RVVVLVIGGG-GREHALCYALK-RSHSCDAVFCAPGNAGI---------SNS-------------GD---ATCIPDLDVL 134 (519)
Q Consensus 82 ~~~vliiG~g-~~~~~l~~~l~-~~~g~~~v~~~~~~~~~---------~~~-------------~~---~~~v~~~d~~ 134 (519)
.|+|||+|+. .....++..|. +. |++++.++...... ... .. ...+ ..|..
T Consensus 2 ~m~vlVTGatG~iG~~l~~~L~~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~Dl~ 79 (397)
T 1gy8_A 2 HMRVLVCGGAGYIGSHFVRALLRDT-NHSVVIVDSLVGTHGKSDHVETRENVARKLQQSDGPKPPWADRYAALE-VGDVR 79 (397)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHHC-CCEEEEEECCTTTTTCCTTSCCHHHHHHHHHHSCSSCCTTTTCCCEEE-ESCTT
T ss_pred CCEEEEECCCCHHHHHHHHHHHHhC-CCEEEEEecCCcccccccccchHHHHHHHHHHhhccccccCCceEEEE-ECCCC
Confidence 3689999975 45567888888 66 88887775432111 000 01 1223 56888
Q ss_pred CHHHHHHHHHHcC-CcEEEE
Q 010065 135 DGDAVISFCRKWS-VGLVVV 153 (519)
Q Consensus 135 d~~~l~~~~~~~~-id~Vi~ 153 (519)
|.+.+.+++++.+ +|+||-
T Consensus 80 d~~~~~~~~~~~~~~d~vih 99 (397)
T 1gy8_A 80 NEDFLNGVFTRHGPIDAVVH 99 (397)
T ss_dssp CHHHHHHHHHHSCCCCEEEE
T ss_pred CHHHHHHHHHhcCCCCEEEE
Confidence 8888888887766 999997
No 166
>2ydy_A Methionine adenosyltransferase 2 subunit beta; oxidoreductase; 2.25A {Homo sapiens} PDB: 2ydx_A
Probab=72.14 E-value=4.6 Score=38.54 Aligned_cols=63 Identities=22% Similarity=0.246 Sum_probs=34.9
Q ss_pred cEEEEEeCC-hhHHHHHHHHHhcCCCcEEEEecCCCCCcCCCCCccccCCCCCCHHHHHHHHHHcCCcEEEE
Q 010065 83 VVVLVIGGG-GREHALCYALKRSHSCDAVFCAPGNAGISNSGDATCIPDLDVLDGDAVISFCRKWSVGLVVV 153 (519)
Q Consensus 83 ~~vliiG~g-~~~~~l~~~l~~~~g~~~v~~~~~~~~~~~~~~~~~v~~~d~~d~~~l~~~~~~~~id~Vi~ 153 (519)
++|||+|+. .....++..|.+. |++++.++..... . ..+ ..|..|.+.+.++++..++|+||-
T Consensus 3 ~~vlVtGatG~iG~~l~~~L~~~-g~~V~~~~r~~~~----~--~~~-~~Dl~d~~~~~~~~~~~~~d~vih 66 (315)
T 2ydy_A 3 RRVLVTGATGLLGRAVHKEFQQN-NWHAVGCGFRRAR----P--KFE-QVNLLDSNAVHHIIHDFQPHVIVH 66 (315)
T ss_dssp CEEEEETTTSHHHHHHHHHHHTT-TCEEEEEC-------------------------CHHHHHHHCCSEEEE
T ss_pred CeEEEECCCcHHHHHHHHHHHhC-CCeEEEEccCCCC----C--CeE-EecCCCHHHHHHHHHhhCCCEEEE
Confidence 689999975 4556788888876 8888776532111 0 122 456666667777776668999997
No 167
>3db2_A Putative NADPH-dependent oxidoreductase; two domain protein, rossman fold, putative dehydrogenase, ST genomics; 1.70A {Desulfitobacterium hafniense dcb-2}
Probab=72.09 E-value=2.6 Score=41.57 Aligned_cols=142 Identities=14% Similarity=0.126 Sum_probs=69.9
Q ss_pred CccEEEEEeCChhHHHHHHHHHhcCCCcEEEEecCCCCCc-CCCCCccccCCCCCCHHHHHHHHHHcCCcEEEECCChhh
Q 010065 81 QRVVVLVIGGGGREHALCYALKRSHSCDAVFCAPGNAGIS-NSGDATCIPDLDVLDGDAVISFCRKWSVGLVVVGPEAPL 159 (519)
Q Consensus 81 ~~~~vliiG~g~~~~~l~~~l~~~~g~~~v~~~~~~~~~~-~~~~~~~v~~~d~~d~~~l~~~~~~~~id~Vi~g~E~~~ 159 (519)
.+++|.|||.|......+..+++..+++++.+.+.++... .......+ . ...+.+++ +...++|+|+...-...
T Consensus 4 ~~~~vgiiG~G~~g~~~~~~l~~~~~~~lvav~d~~~~~~~~~~~~~g~-~-~~~~~~~~---l~~~~~D~V~i~tp~~~ 78 (354)
T 3db2_A 4 NPVGVAAIGLGRWAYVMADAYTKSEKLKLVTCYSRTEDKREKFGKRYNC-A-GDATMEAL---LAREDVEMVIITVPNDK 78 (354)
T ss_dssp CCEEEEEECCSHHHHHHHHHHTTCSSEEEEEEECSSHHHHHHHHHHHTC-C-CCSSHHHH---HHCSSCCEEEECSCTTS
T ss_pred CcceEEEEccCHHHHHHHHHHHhCCCcEEEEEECCCHHHHHHHHHHcCC-C-CcCCHHHH---hcCCCCCEEEEeCChHH
Confidence 4679999999976555677777665777665533222110 00000011 1 13445554 44567999998533333
Q ss_pred HHHHHHHHHHCCCCeeCCcHHHHHHhcCHHHHHHHHHHcCCCCCCeeec---CCHHHHHHHHH--HhCCCEEEE
Q 010065 160 VSGLANKLVKAGIPTFGPSSEAAALEGSKNFMKNLCDKYGIPTAKYKTF---TDPNAAKQYIQ--EEGAPIVVK 228 (519)
Q Consensus 160 ~~~~a~~le~~gip~~g~~~~~~~~~~dK~~~k~~l~~~Gi~~p~~~~v---~~~~~~~~~~~--~~g~P~VvK 228 (519)
-..++..+-+.|.+++.-.+-+... .+=..+.+++++.|+..--.... .....+.+.++ .+|-+..+.
T Consensus 79 h~~~~~~al~~gk~vl~EKP~~~~~-~~~~~l~~~a~~~~~~~~v~~~~R~~p~~~~~k~~i~~g~iG~i~~v~ 151 (354)
T 3db2_A 79 HAEVIEQCARSGKHIYVEKPISVSL-DHAQRIDQVIKETGVKFLCGHSSRRLGALRKMKEMIDTKEIGEVSSIE 151 (354)
T ss_dssp HHHHHHHHHHTTCEEEEESSSCSSH-HHHHHHHHHHHHHCCCEEEECGGGGSHHHHHHHHHHHTTTTCCEEEEE
T ss_pred HHHHHHHHHHcCCEEEEccCCCCCH-HHHHHHHHHHHHcCCeEEEeechhcCHHHHHHHHHHhcCCCCCeEEEE
Confidence 2244445556788776322211111 11123445667777654221111 12234455554 366555443
No 168
>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*
Probab=71.87 E-value=17 Score=33.63 Aligned_cols=33 Identities=21% Similarity=0.180 Sum_probs=25.5
Q ss_pred ccEEEEEeCChhHHHHHHHHHhcCCCcEEE-EecC
Q 010065 82 RVVVLVIGGGGREHALCYALKRSHSCDAVF-CAPG 115 (519)
Q Consensus 82 ~~~vliiG~g~~~~~l~~~l~~~~g~~~v~-~~~~ 115 (519)
..+|+|+|.|+....++..|.+. |+..+. ++.+
T Consensus 31 ~~~VlVvG~Gg~G~~va~~La~~-Gv~~i~lvD~d 64 (249)
T 1jw9_B 31 DSRVLIVGLGGLGCAASQYLASA-GVGNLTLLDFD 64 (249)
T ss_dssp HCEEEEECCSHHHHHHHHHHHHH-TCSEEEEECCC
T ss_pred CCeEEEEeeCHHHHHHHHHHHHc-CCCeEEEEcCC
Confidence 46899999998888889999887 885544 4443
No 169
>3rc1_A Sugar 3-ketoreductase; sugar biosynthesis, TDP binding, NADP binding binding protein; HET: TLO NAP; 1.71A {Actinomadura kijaniata} PDB: 3rbv_A* 3rc2_A* 3rcb_A* 3rc7_A* 3rc9_A*
Probab=71.55 E-value=1.7 Score=42.94 Aligned_cols=143 Identities=13% Similarity=0.014 Sum_probs=73.8
Q ss_pred CccEEEEEeCChhHH-HHHHHHHhcCCCcEEEEecCCCCC-cCCCCCccccCCCCCCHHHHHHHHHHcCCcEEEECCChh
Q 010065 81 QRVVVLVIGGGGREH-ALCYALKRSHSCDAVFCAPGNAGI-SNSGDATCIPDLDVLDGDAVISFCRKWSVGLVVVGPEAP 158 (519)
Q Consensus 81 ~~~~vliiG~g~~~~-~l~~~l~~~~g~~~v~~~~~~~~~-~~~~~~~~v~~~d~~d~~~l~~~~~~~~id~Vi~g~E~~ 158 (519)
++++|.|||.|.... ..+..+.+..+++++.+.+.+... ........+.. ..+.+++ +...++|+|+...-..
T Consensus 26 ~~~rigiIG~G~~g~~~~~~~l~~~~~~~l~av~d~~~~~~~~~a~~~g~~~--~~~~~~l---l~~~~~D~V~i~tp~~ 100 (350)
T 3rc1_A 26 NPIRVGVIGCADIAWRRALPALEAEPLTEVTAIASRRWDRAKRFTERFGGEP--VEGYPAL---LERDDVDAVYVPLPAV 100 (350)
T ss_dssp CCEEEEEESCCHHHHHTHHHHHHHCTTEEEEEEEESSHHHHHHHHHHHCSEE--EESHHHH---HTCTTCSEEEECCCGG
T ss_pred CceEEEEEcCcHHHHHHHHHHHHhCCCeEEEEEEcCCHHHHHHHHHHcCCCC--cCCHHHH---hcCCCCCEEEECCCcH
Confidence 357999999996554 456677766677776554322211 00000000101 1344444 4456799999865444
Q ss_pred hHHHHHHHHHHCCCCeeCCcHHHHHHhcCHHHHHHHHHHcCCCCCCee---ecCCHHHHHHHHH--HhCCCEEEEe
Q 010065 159 LVSGLANKLVKAGIPTFGPSSEAAALEGSKNFMKNLCDKYGIPTAKYK---TFTDPNAAKQYIQ--EEGAPIVVKA 229 (519)
Q Consensus 159 ~~~~~a~~le~~gip~~g~~~~~~~~~~dK~~~k~~l~~~Gi~~p~~~---~v~~~~~~~~~~~--~~g~P~VvKP 229 (519)
.-..++..+-+.|.+++.-.|-+... .+=..+.+++++.|+..-... .......+.+.++ .+|-+..+.-
T Consensus 101 ~h~~~~~~al~aGk~Vl~EKP~a~~~-~ea~~l~~~a~~~g~~~~v~~~~R~~p~~~~~k~~i~~G~iG~i~~v~~ 175 (350)
T 3rc1_A 101 LHAEWIDRALRAGKHVLAEKPLTTDR-PQAERLFAVARERGLLLMENFMFLHHPQHRQVADMLDEGVIGEIRSFAA 175 (350)
T ss_dssp GHHHHHHHHHHTTCEEEEESSSCSSH-HHHHHHHHHHHHTTCCEEEECGGGGCTHHHHHHHHHHTTTTCSEEEEEE
T ss_pred HHHHHHHHHHHCCCcEEEeCCCCCCH-HHHHHHHHHHHHhCCEEEEEecccCCHHHHHHHHHHhcCCCCCeEEEEE
Confidence 43345555667788776322211111 112235566778887652211 1122345666665 5676665554
No 170
>2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A*
Probab=71.36 E-value=11 Score=34.93 Aligned_cols=71 Identities=21% Similarity=0.197 Sum_probs=45.3
Q ss_pred CccEEEEEeCC-hhHHHHHHHHHhcCCCcEEEEecCCCCCcCC-----CCCccccCCCCCCHHHHHHHHHHc-----CCc
Q 010065 81 QRVVVLVIGGG-GREHALCYALKRSHSCDAVFCAPGNAGISNS-----GDATCIPDLDVLDGDAVISFCRKW-----SVG 149 (519)
Q Consensus 81 ~~~~vliiG~g-~~~~~l~~~l~~~~g~~~v~~~~~~~~~~~~-----~~~~~v~~~d~~d~~~l~~~~~~~-----~id 149 (519)
+.++++|+|++ +....+++.|.+. |++++.++.+....... .....+ ..|..|.+.+.+++++. ++|
T Consensus 11 ~~k~vlVTGasggiG~~~a~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~-~~D~~~~~~v~~~~~~~~~~~g~id 88 (265)
T 2o23_A 11 KGLVAVITGGASGLGLATAERLVGQ-GASAVLLDLPNSGGEAQAKKLGNNCVFA-PADVTSEKDVQTALALAKGKFGRVD 88 (265)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHT-TCEEEEEECTTSSHHHHHHHHCTTEEEE-ECCTTCHHHHHHHHHHHHHHHSCCC
T ss_pred CCCEEEEECCCChHHHHHHHHHHHC-CCEEEEEeCCcHhHHHHHHHhCCceEEE-EcCCCCHHHHHHHHHHHHHHCCCCC
Confidence 35789999976 3556788888877 88888776442211100 011222 56888877776666532 799
Q ss_pred EEEE
Q 010065 150 LVVV 153 (519)
Q Consensus 150 ~Vi~ 153 (519)
++|.
T Consensus 89 ~li~ 92 (265)
T 2o23_A 89 VAVN 92 (265)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 9997
No 171
>3e18_A Oxidoreductase; dehydrogenase, NAD-binding, structural genom protein structure initiative, PSI, NEW YORK structural GENO research consortium; HET: NAD; 1.95A {Listeria innocua}
Probab=71.34 E-value=2 Score=42.51 Aligned_cols=116 Identities=10% Similarity=-0.029 Sum_probs=60.3
Q ss_pred CccEEEEEeCChhHHHHHHHHHhcCCCcEEEEecCCCCCcCCCCCccccCCCCCCHHHHHHHHHHcCCcEEEECCChhhH
Q 010065 81 QRVVVLVIGGGGREHALCYALKRSHSCDAVFCAPGNAGISNSGDATCIPDLDVLDGDAVISFCRKWSVGLVVVGPEAPLV 160 (519)
Q Consensus 81 ~~~~vliiG~g~~~~~l~~~l~~~~g~~~v~~~~~~~~~~~~~~~~~v~~~d~~d~~~l~~~~~~~~id~Vi~g~E~~~~ 160 (519)
++++|.|||.|......+..+.+..+++++.+.+.++...... ......-..|.+++ +...++|+|+...-...-
T Consensus 4 ~~~~vgiiG~G~~g~~~~~~l~~~~~~~l~av~d~~~~~~~~a--~~~g~~~~~~~~~l---l~~~~~D~V~i~tp~~~h 78 (359)
T 3e18_A 4 KKYQLVIVGYGGMGSYHVTLASAADNLEVHGVFDILAEKREAA--AQKGLKIYESYEAV---LADEKVDAVLIATPNDSH 78 (359)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHTSTTEEEEEEECSSHHHHHHH--HTTTCCBCSCHHHH---HHCTTCCEEEECSCGGGH
T ss_pred CcCcEEEECcCHHHHHHHHHHHhCCCcEEEEEEcCCHHHHHHH--HhcCCceeCCHHHH---hcCCCCCEEEEcCCcHHH
Confidence 3579999999965555566776665777765543322111100 00100112345554 445689999986544443
Q ss_pred HHHHHHHHHCCCCeeCCcHHHHHHhcCHHHHHHHHHHcCCCC
Q 010065 161 SGLANKLVKAGIPTFGPSSEAAALEGSKNFMKNLCDKYGIPT 202 (519)
Q Consensus 161 ~~~a~~le~~gip~~g~~~~~~~~~~dK~~~k~~l~~~Gi~~ 202 (519)
..++..+-+.|.+++.-.|-+... .+=..+.+++++.|+..
T Consensus 79 ~~~~~~al~aGkhVl~EKP~a~~~-~ea~~l~~~a~~~g~~~ 119 (359)
T 3e18_A 79 KELAISALEAGKHVVCEKPVTMTS-EDLLAIMDVAKRVNKHF 119 (359)
T ss_dssp HHHHHHHHHTTCEEEEESSCCSSH-HHHHHHHHHHHHHTCCE
T ss_pred HHHHHHHHHCCCCEEeeCCCcCCH-HHHHHHHHHHHHhCCeE
Confidence 344555556788776322211111 11123445667777654
No 172
>4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus}
Probab=71.03 E-value=3.2 Score=39.16 Aligned_cols=86 Identities=19% Similarity=0.295 Sum_probs=44.3
Q ss_pred CCCCCcccccCCCCCCCccEEEEEeCC-hhHHHHHHHHHhcCCCcEEEEecCCCCCcC----C-CCCccccCCCCCCHHH
Q 010065 65 QKSQPSVSVNAPTNAGQRVVVLVIGGG-GREHALCYALKRSHSCDAVFCAPGNAGISN----S-GDATCIPDLDVLDGDA 138 (519)
Q Consensus 65 ~s~e~~vS~~s~~~~~~~~~vliiG~g-~~~~~l~~~l~~~~g~~~v~~~~~~~~~~~----~-~~~~~v~~~d~~d~~~ 138 (519)
.+..+.++..+... ...++++|+|++ +....++..|.+. |.++++++.+...... . .....+ ..|..|.+.
T Consensus 12 ~~~~~~~~~~~m~~-~~~k~~lVTGas~GIG~aia~~la~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~-~~Dv~d~~~ 88 (272)
T 4dyv_A 12 DLGTENLYFQSMSK-TGKKIAIVTGAGSGVGRAVAVALAGA-GYGVALAGRRLDALQETAAEIGDDALCV-PTDVTDPDS 88 (272)
T ss_dssp -----------------CCEEEETTTTSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHTSCCEEE-ECCTTSHHH
T ss_pred cCCcceeehhhhcC-CCCCEEEEeCCCcHHHHHHHHHHHHC-CCEEEEEECCHHHHHHHHHHhCCCeEEE-EecCCCHHH
Confidence 34455555544322 235678888865 4566788898887 8988777543111000 0 112223 568888777
Q ss_pred HHHHHHHc-----CCcEEEE
Q 010065 139 VISFCRKW-----SVGLVVV 153 (519)
Q Consensus 139 l~~~~~~~-----~id~Vi~ 153 (519)
+.+++++. ++|+++.
T Consensus 89 v~~~~~~~~~~~g~iD~lVn 108 (272)
T 4dyv_A 89 VRALFTATVEKFGRVDVLFN 108 (272)
T ss_dssp HHHHHHHHHHHHSCCCEEEE
T ss_pred HHHHHHHHHHHcCCCCEEEE
Confidence 77666543 7999987
No 173
>1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A*
Probab=70.97 E-value=7.4 Score=37.82 Aligned_cols=68 Identities=21% Similarity=0.099 Sum_probs=43.8
Q ss_pred ccEEEEEeCC-hhHHHHHHHHHhcCCCcEEEEecCCCCCc-CC------------CCCccccCCCCCCHHHHHHHHHHcC
Q 010065 82 RVVVLVIGGG-GREHALCYALKRSHSCDAVFCAPGNAGIS-NS------------GDATCIPDLDVLDGDAVISFCRKWS 147 (519)
Q Consensus 82 ~~~vliiG~g-~~~~~l~~~l~~~~g~~~v~~~~~~~~~~-~~------------~~~~~v~~~d~~d~~~l~~~~~~~~ 147 (519)
+++|||+|+. .....++..|.+. |++++.++....... .. .....+ ..|..|.+.+.++++ +
T Consensus 27 ~~~vlVtGatG~iG~~l~~~L~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~Dl~d~~~~~~~~~--~ 102 (352)
T 1sb8_A 27 PKVWLITGVAGFIGSNLLETLLKL-DQKVVGLDNFATGHQRNLDEVRSLVSEKQWSNFKFI-QGDIRNLDDCNNACA--G 102 (352)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHT-TCEEEEEECCSSCCHHHHHHHHHHSCHHHHTTEEEE-ECCTTSHHHHHHHHT--T
T ss_pred CCeEEEECCCcHHHHHHHHHHHHC-CCEEEEEeCCCccchhhHHHHhhhcccccCCceEEE-ECCCCCHHHHHHHhc--C
Confidence 4789999985 4556788888877 888877754321110 00 111223 567788777777665 7
Q ss_pred CcEEEE
Q 010065 148 VGLVVV 153 (519)
Q Consensus 148 id~Vi~ 153 (519)
+|+||-
T Consensus 103 ~d~vih 108 (352)
T 1sb8_A 103 VDYVLH 108 (352)
T ss_dssp CSEEEE
T ss_pred CCEEEE
Confidence 899987
No 174
>2lpm_A Two-component response regulator; transcription regulator; NMR {Sinorhizobium meliloti}
Probab=70.94 E-value=15 Score=30.01 Aligned_cols=71 Identities=15% Similarity=0.203 Sum_probs=43.5
Q ss_pred ccEEEEEeCChh-HHHHHHHHHhcCCCcEEEEecCCCCCcCCCCCccccCCCCCCHHHHHHHHHHcCCcEEEEC----CC
Q 010065 82 RVVVLVIGGGGR-EHALCYALKRSHSCDAVFCAPGNAGISNSGDATCIPDLDVLDGDAVISFCRKWSVGLVVVG----PE 156 (519)
Q Consensus 82 ~~~vliiG~g~~-~~~l~~~l~~~~g~~~v~~~~~~~~~~~~~~~~~v~~~d~~d~~~l~~~~~~~~id~Vi~g----~E 156 (519)
++||||+--... ...+...|.+. |++++.. ..+.++-++.+++.++|+|+.. +.
T Consensus 8 ~~rILiVdD~~~~~~~l~~~L~~~-G~~v~~~--------------------a~~g~eAl~~~~~~~~DlvllDi~mP~~ 66 (123)
T 2lpm_A 8 RLRVLVVEDESMIAMLIEDTLCEL-GHEVAAT--------------------ASRMQEALDIARKGQFDIAIIDVNLDGE 66 (123)
T ss_dssp CCCEEEESSSTTTSHHHHHHHHHH-CCCCCBC--------------------SCCHHHHHHHHHHCCSSEEEECSSSSSC
T ss_pred CCEEEEEeCCHHHHHHHHHHHHHC-CCEEEEE--------------------ECCHHHHHHHHHhCCCCEEEEecCCCCC
Confidence 568999986632 12344555444 7654311 1234566677888999999982 45
Q ss_pred hhhHHHHHHHHHHCCCCee
Q 010065 157 APLVSGLANKLVKAGIPTF 175 (519)
Q Consensus 157 ~~~~~~~a~~le~~gip~~ 175 (519)
+|. .+++.+.+.++|++
T Consensus 67 ~G~--el~~~lr~~~ipvI 83 (123)
T 2lpm_A 67 PSY--PVADILAERNVPFI 83 (123)
T ss_dssp CSH--HHHHHHHHTCCSSC
T ss_pred CHH--HHHHHHHcCCCCEE
Confidence 554 35556666777765
No 175
>3p19_A BFPVVD8, putative blue fluorescent protein; rossmann-fold, oxidoreductase; HET: NAP; 2.05A {Vibrio vulnificus}
Probab=70.91 E-value=5.4 Score=37.41 Aligned_cols=70 Identities=14% Similarity=0.209 Sum_probs=44.7
Q ss_pred ccEEEEEeCC-hhHHHHHHHHHhcCCCcEEEEecCCCCCcCC--CCCccccCCCCCCHHHHHHHHHHc-----CCcEEEE
Q 010065 82 RVVVLVIGGG-GREHALCYALKRSHSCDAVFCAPGNAGISNS--GDATCIPDLDVLDGDAVISFCRKW-----SVGLVVV 153 (519)
Q Consensus 82 ~~~vliiG~g-~~~~~l~~~l~~~~g~~~v~~~~~~~~~~~~--~~~~~v~~~d~~d~~~l~~~~~~~-----~id~Vi~ 153 (519)
+++++|+|++ +....++..|.+. |.++++++.+....... .....+ ..|..|.+.+.+++++. ++|+++.
T Consensus 16 ~k~vlVTGas~gIG~aia~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~-~~Dv~d~~~v~~~~~~~~~~~g~iD~lvn 93 (266)
T 3p19_A 16 KKLVVITGASSGIGEAIARRFSEE-GHPLLLLARRVERLKALNLPNTLCA-QVDVTDKYTFDTAITRAEKIYGPADAIVN 93 (266)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHT-TCCEEEEESCHHHHHTTCCTTEEEE-ECCTTCHHHHHHHHHHHHHHHCSEEEEEE
T ss_pred CCEEEEECCCCHHHHHHHHHHHHC-CCEEEEEECCHHHHHHhhcCCceEE-EecCCCHHHHHHHHHHHHHHCCCCCEEEE
Confidence 5789999976 4566788888887 99988876431111111 011222 56888877776665542 7899987
No 176
>1ek6_A UDP-galactose 4-epimerase; short-chain dehydrogenase, galactosemia, isomerase; HET: NAI UPG; 1.50A {Homo sapiens} SCOP: c.2.1.2 PDB: 1ek5_A* 1hzj_A* 1i3k_A* 1i3l_A* 1i3m_A* 1i3n_A*
Probab=70.84 E-value=11 Score=36.33 Aligned_cols=70 Identities=20% Similarity=0.211 Sum_probs=45.9
Q ss_pred ccEEEEEeCC-hhHHHHHHHHHhcCCCcEEEEecCCCC------C-cC--------CCCCccccCCCCCCHHHHHHHHHH
Q 010065 82 RVVVLVIGGG-GREHALCYALKRSHSCDAVFCAPGNAG------I-SN--------SGDATCIPDLDVLDGDAVISFCRK 145 (519)
Q Consensus 82 ~~~vliiG~g-~~~~~l~~~l~~~~g~~~v~~~~~~~~------~-~~--------~~~~~~v~~~d~~d~~~l~~~~~~ 145 (519)
+++|||+|+. .....++..|.+. |++++.++..... . .. ......+ ..|..|.+.+.+++++
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~~-g~~V~~~~r~~~~~r~~~~~~~~~~~l~~~~~~~~~~~-~~D~~~~~~~~~~~~~ 79 (348)
T 1ek6_A 2 AEKVLVTGGAGYIGSHTVLELLEA-GYLPVVIDNFHNAFRGGGSLPESLRRVQELTGRSVEFE-EMDILDQGALQRLFKK 79 (348)
T ss_dssp CSEEEEETTTSHHHHHHHHHHHHT-TCCEEEEECSSSSCBCSSSSBHHHHHHHHHHTCCCEEE-ECCTTCHHHHHHHHHH
T ss_pred CCEEEEECCCCHHHHHHHHHHHHC-CCEEEEEecCCcccccccccHHHHHHHHhccCCceEEE-ECCCCCHHHHHHHHHh
Confidence 3689999965 4556788888877 8888877532211 0 00 0011223 5688888888888877
Q ss_pred cCCcEEEE
Q 010065 146 WSVGLVVV 153 (519)
Q Consensus 146 ~~id~Vi~ 153 (519)
.++|.||-
T Consensus 80 ~~~d~vih 87 (348)
T 1ek6_A 80 YSFMAVIH 87 (348)
T ss_dssp CCEEEEEE
T ss_pred cCCCEEEE
Confidence 68999987
No 177
>3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} SCOP: c.2.1.0
Probab=70.56 E-value=9.4 Score=35.75 Aligned_cols=71 Identities=14% Similarity=0.152 Sum_probs=45.5
Q ss_pred CccEEEEEeCC-hhHHHHHHHHHhcCCCcEEEEecCCCCCcCC-----CCCccccCCCCCCHHHHHHHHHHc-----CCc
Q 010065 81 QRVVVLVIGGG-GREHALCYALKRSHSCDAVFCAPGNAGISNS-----GDATCIPDLDVLDGDAVISFCRKW-----SVG 149 (519)
Q Consensus 81 ~~~~vliiG~g-~~~~~l~~~l~~~~g~~~v~~~~~~~~~~~~-----~~~~~v~~~d~~d~~~l~~~~~~~-----~id 149 (519)
+.++++|+|++ +....++..|.+. |.++++++.+....... .....+ ..|..|.+.+.+++++. ++|
T Consensus 10 ~~k~vlVTGas~gIG~aia~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~-~~Dv~~~~~v~~~~~~~~~~~g~id 87 (271)
T 3tzq_B 10 ENKVAIITGACGGIGLETSRVLARA-GARVVLADLPETDLAGAAASVGRGAVHH-VVDLTNEVSVRALIDFTIDTFGRLD 87 (271)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHT-TCEEEEEECTTSCHHHHHHHHCTTCEEE-ECCTTCHHHHHHHHHHHHHHHSCCC
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHC-CCEEEEEcCCHHHHHHHHHHhCCCeEEE-ECCCCCHHHHHHHHHHHHHHcCCCC
Confidence 35789999976 4566788999887 88887776443221100 111222 56888877776666543 799
Q ss_pred EEEE
Q 010065 150 LVVV 153 (519)
Q Consensus 150 ~Vi~ 153 (519)
.++.
T Consensus 88 ~lv~ 91 (271)
T 3tzq_B 88 IVDN 91 (271)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 9987
No 178
>2dc1_A L-aspartate dehydrogenase; NAD, oxidoreductase; HET: CIT NAD; 1.90A {Archaeoglobus fulgidus}
Probab=70.47 E-value=18 Score=33.04 Aligned_cols=104 Identities=22% Similarity=0.191 Sum_probs=55.7
Q ss_pred cEEEEEeCChhHHHHHHHHHhcCCCcEEEEecCCCCCcCCCCCccccCCCCCCHHHHHHHHHHcCCcEEEECCChhhHHH
Q 010065 83 VVVLVIGGGGREHALCYALKRSHSCDAVFCAPGNAGISNSGDATCIPDLDVLDGDAVISFCRKWSVGLVVVGPEAPLVSG 162 (519)
Q Consensus 83 ~~vliiG~g~~~~~l~~~l~~~~g~~~v~~~~~~~~~~~~~~~~~v~~~d~~d~~~l~~~~~~~~id~Vi~g~E~~~~~~ 162 (519)
+||.|+|.|.....++..+.+ .|++++.+.+.+... . . ...+++++++ .++|+|+...-+.....
T Consensus 1 m~vgiIG~G~mG~~~~~~l~~-~g~~lv~v~d~~~~~---~--~-----~~~~~~~l~~----~~~DvVv~~~~~~~~~~ 65 (236)
T 2dc1_A 1 MLVGLIGYGAIGKFLAEWLER-NGFEIAAILDVRGEH---E--K-----MVRGIDEFLQ----REMDVAVEAASQQAVKD 65 (236)
T ss_dssp CEEEEECCSHHHHHHHHHHHH-TTCEEEEEECSSCCC---T--T-----EESSHHHHTT----SCCSEEEECSCHHHHHH
T ss_pred CEEEEECCCHHHHHHHHHHhc-CCCEEEEEEecCcch---h--h-----hcCCHHHHhc----CCCCEEEECCCHHHHHH
Confidence 479999999766666777764 488775443222111 0 0 1234454432 57999998543333334
Q ss_pred HHHHHHHCCCCeeCCcHHHHHHhcCHHHHHHHHHHcCCC
Q 010065 163 LANKLVKAGIPTFGPSSEAAALEGSKNFMKNLCDKYGIP 201 (519)
Q Consensus 163 ~a~~le~~gip~~g~~~~~~~~~~dK~~~k~~l~~~Gi~ 201 (519)
....+-+.|.+++-.++-+.....-...+.+.+++.|..
T Consensus 66 ~~~~~l~~G~~vv~~~~~~~~~~~~~~~l~~~a~~~g~~ 104 (236)
T 2dc1_A 66 YAEKILKAGIDLIVLSTGAFADRDFLSRVREVCRKTGRR 104 (236)
T ss_dssp HHHHHHHTTCEEEESCGGGGGSHHHHHHHHHHHHHHCCC
T ss_pred HHHHHHHCCCcEEEECcccCChHHHHHHHHHHHHhcCCe
Confidence 444455678887644443211100012445666676765
No 179
>1tlt_A Putative oxidoreductase (virulence factor MVIM HO; structural genomics, NYSGXRC, PSI, protein structure initiative; 2.70A {Escherichia coli} SCOP: c.2.1.3 d.81.1.5
Probab=70.43 E-value=4.7 Score=38.96 Aligned_cols=114 Identities=12% Similarity=0.052 Sum_probs=57.7
Q ss_pred CccEEEEEeCChhHHH-HHHHHHhcCCCcEEEEecCCCCCcCCCCCccccCC-CCCCHHHHHHHHHHcCCcEEEECCChh
Q 010065 81 QRVVVLVIGGGGREHA-LCYALKRSHSCDAVFCAPGNAGISNSGDATCIPDL-DVLDGDAVISFCRKWSVGLVVVGPEAP 158 (519)
Q Consensus 81 ~~~~vliiG~g~~~~~-l~~~l~~~~g~~~v~~~~~~~~~~~~~~~~~v~~~-d~~d~~~l~~~~~~~~id~Vi~g~E~~ 158 (519)
++++|.|||.|..... .+..+.+..+++++.+.+.++..... ..... .+ -..+.+.+ ..++|+|+...-..
T Consensus 4 ~~~~vgiiG~G~~g~~~~~~~l~~~~~~~lvav~d~~~~~~~~-~~~~~-g~~~~~~~~~l-----~~~~D~V~i~tp~~ 76 (319)
T 1tlt_A 4 KKLRIGVVGLGGIAQKAWLPVLAAASDWTLQGAWSPTRAKALP-ICESW-RIPYADSLSSL-----AASCDAVFVHSSTA 76 (319)
T ss_dssp -CEEEEEECCSTHHHHTHHHHHHSCSSEEEEEEECSSCTTHHH-HHHHH-TCCBCSSHHHH-----HTTCSEEEECSCTT
T ss_pred CcceEEEECCCHHHHHHHHHHHHhCCCeEEEEEECCCHHHHHH-HHHHc-CCCccCcHHHh-----hcCCCEEEEeCCch
Confidence 3579999999965443 55666655577766443333221100 00111 11 12344443 35799999854333
Q ss_pred hHHHHHHHHHHCCCCeeCCcHHHHHHhcCHHHHHHHHHHcCCCC
Q 010065 159 LVSGLANKLVKAGIPTFGPSSEAAALEGSKNFMKNLCDKYGIPT 202 (519)
Q Consensus 159 ~~~~~a~~le~~gip~~g~~~~~~~~~~dK~~~k~~l~~~Gi~~ 202 (519)
.-..++..+-+.|.+++.-.+-+... .+-..+.+.+++.|+..
T Consensus 77 ~h~~~~~~al~~G~~v~~eKP~~~~~-~~~~~l~~~a~~~g~~~ 119 (319)
T 1tlt_A 77 SHFDVVSTLLNAGVHVCVDKPLAENL-RDAERLVELAARKKLTL 119 (319)
T ss_dssp HHHHHHHHHHHTTCEEEEESSSCSSH-HHHHHHHHHHHHTTCCE
T ss_pred hHHHHHHHHHHcCCeEEEeCCCCCCH-HHHHHHHHHHHHcCCeE
Confidence 32234444556788776322221111 12234556777888764
No 180
>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum}
Probab=70.21 E-value=6.8 Score=36.96 Aligned_cols=71 Identities=18% Similarity=0.246 Sum_probs=45.5
Q ss_pred CccEEEEEeCC-hhHHHHHHHHHhcCCCcEEEEecCCCCCcCC--------CCCccccCCCCCCHHHHHHHHHHc-----
Q 010065 81 QRVVVLVIGGG-GREHALCYALKRSHSCDAVFCAPGNAGISNS--------GDATCIPDLDVLDGDAVISFCRKW----- 146 (519)
Q Consensus 81 ~~~~vliiG~g-~~~~~l~~~l~~~~g~~~v~~~~~~~~~~~~--------~~~~~v~~~d~~d~~~l~~~~~~~----- 146 (519)
+.++++|+|++ +....++..|.+. |.++++++.+....... .....+ ..|..|.+.+.+++++.
T Consensus 31 ~gk~~lVTGas~GIG~aia~~la~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~-~~Dl~d~~~v~~~~~~~~~~~g 108 (276)
T 3r1i_A 31 SGKRALITGASTGIGKKVALAYAEA-GAQVAVAARHSDALQVVADEIAGVGGKALPI-RCDVTQPDQVRGMLDQMTGELG 108 (276)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHT-TCEEEEEESSGGGGHHHHHHHHHTTCCCEEE-ECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHHHhcCCeEEEE-EcCCCCHHHHHHHHHHHHHHcC
Confidence 35789999976 4556788888887 89887775432111100 011223 56888877777666543
Q ss_pred CCcEEEE
Q 010065 147 SVGLVVV 153 (519)
Q Consensus 147 ~id~Vi~ 153 (519)
++|+++.
T Consensus 109 ~iD~lvn 115 (276)
T 3r1i_A 109 GIDIAVC 115 (276)
T ss_dssp CCSEEEE
T ss_pred CCCEEEE
Confidence 7999987
No 181
>3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori}
Probab=70.15 E-value=9.1 Score=37.36 Aligned_cols=71 Identities=15% Similarity=0.244 Sum_probs=45.0
Q ss_pred CccEEEEEeCCh-hHHHHHHHHHhc-CCCcEEEEecCCC------------C-CcCCC--CCccccCCCCCCHHHHHHHH
Q 010065 81 QRVVVLVIGGGG-REHALCYALKRS-HSCDAVFCAPGNA------------G-ISNSG--DATCIPDLDVLDGDAVISFC 143 (519)
Q Consensus 81 ~~~~vliiG~g~-~~~~l~~~l~~~-~g~~~v~~~~~~~------------~-~~~~~--~~~~v~~~d~~d~~~l~~~~ 143 (519)
..++|||+|+.| ....++..|.+. .|++++.++.... . ..... ....+ ..|..|.+.+.++
T Consensus 9 ~~~~vlVTGatG~IG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~Dl~d~~~~~~~- 86 (362)
T 3sxp_A 9 ENQTILITGGAGFVGSNLAFHFQENHPKAKVVVLDKFRSNTLFSNNRPSSLGHFKNLIGFKGEVI-AADINNPLDLRRL- 86 (362)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHHCTTSEEEEEECCCCC-------CCCCCCGGGGTTCCSEEE-ECCTTCHHHHHHH-
T ss_pred CCCEEEEECCCCHHHHHHHHHHHhhCCCCeEEEEECCCccccccccchhhhhhhhhccccCceEE-ECCCCCHHHHHHh-
Confidence 457999998754 566788888872 2898888764321 0 00000 11222 5688888777765
Q ss_pred HHcCCcEEEE
Q 010065 144 RKWSVGLVVV 153 (519)
Q Consensus 144 ~~~~id~Vi~ 153 (519)
...++|+||-
T Consensus 87 ~~~~~D~vih 96 (362)
T 3sxp_A 87 EKLHFDYLFH 96 (362)
T ss_dssp TTSCCSEEEE
T ss_pred hccCCCEEEE
Confidence 3457999996
No 182
>3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase, oxidoreductase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B}
Probab=70.05 E-value=4.4 Score=37.95 Aligned_cols=74 Identities=19% Similarity=0.222 Sum_probs=44.8
Q ss_pred CCCCccEEEEEeCC-hhHHHHHHHHHhcCCCcEEEEecCCCCC-c-------C-CCCCccccCCCCCCHHHHHHHHHHc-
Q 010065 78 NAGQRVVVLVIGGG-GREHALCYALKRSHSCDAVFCAPGNAGI-S-------N-SGDATCIPDLDVLDGDAVISFCRKW- 146 (519)
Q Consensus 78 ~~~~~~~vliiG~g-~~~~~l~~~l~~~~g~~~v~~~~~~~~~-~-------~-~~~~~~v~~~d~~d~~~l~~~~~~~- 146 (519)
++..+++++|+|++ +....+++.|.+. |.++++++..+... . . ......+ ..|..|.+.+.+++++.
T Consensus 21 ~~~~~k~vlITGas~gIG~~~a~~l~~~-G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~Dl~~~~~v~~~~~~~~ 98 (269)
T 3gk3_A 21 SMQAKRVAFVTGGMGGLGAAISRRLHDA-GMAVAVSHSERNDHVSTWLMHERDAGRDFKAY-AVDVADFESCERCAEKVL 98 (269)
T ss_dssp ---CCCEEEETTTTSHHHHHHHHHHHTT-TCEEEEEECSCHHHHHHHHHHHHTTTCCCEEE-ECCTTCHHHHHHHHHHHH
T ss_pred hhhcCCEEEEECCCchHHHHHHHHHHHC-CCEEEEEcCCchHHHHHHHHHHHhcCCceEEE-EecCCCHHHHHHHHHHHH
Confidence 34456788898865 4566788888877 88887775322110 0 0 0111223 57888877776666543
Q ss_pred ----CCcEEEE
Q 010065 147 ----SVGLVVV 153 (519)
Q Consensus 147 ----~id~Vi~ 153 (519)
++|++|.
T Consensus 99 ~~~g~id~li~ 109 (269)
T 3gk3_A 99 ADFGKVDVLIN 109 (269)
T ss_dssp HHHSCCSEEEE
T ss_pred HHcCCCCEEEE
Confidence 7999997
No 183
>2v6g_A Progesterone 5-beta-reductase; tyrosine-dependent oxidoreductase, oxidoreductase, SDR, cardenolides, cardiac glycosides; HET: NAP; 2.3A {Digitalis lanata} PDB: 2v6f_A*
Probab=69.84 E-value=7.3 Score=37.90 Aligned_cols=69 Identities=17% Similarity=0.121 Sum_probs=44.0
Q ss_pred cEEEEEeCCh-hHHHHHHHHHhcCC-----CcEEEEecCCCCCcCC-CCCccccCCCCCCHHHHHHHHHHcC-CcEEEE
Q 010065 83 VVVLVIGGGG-REHALCYALKRSHS-----CDAVFCAPGNAGISNS-GDATCIPDLDVLDGDAVISFCRKWS-VGLVVV 153 (519)
Q Consensus 83 ~~vliiG~g~-~~~~l~~~l~~~~g-----~~~v~~~~~~~~~~~~-~~~~~v~~~d~~d~~~l~~~~~~~~-id~Vi~ 153 (519)
|+|||+|+.| ....++..|.+. | ++++.++......... .....+ ..|..|.+.+.++++..+ +|.||-
T Consensus 2 ~~vlVtGatG~iG~~l~~~L~~~-g~~~~~~~V~~~~r~~~~~~~~~~~~~~~-~~Dl~d~~~~~~~~~~~~~~d~vih 78 (364)
T 2v6g_A 2 SVALIVGVTGIIGNSLAEILPLA-DTPGGPWKVYGVARRTRPAWHEDNPINYV-QCDISDPDDSQAKLSPLTDVTHVFY 78 (364)
T ss_dssp EEEEEETTTSHHHHHHHHHTTST-TCTTCSEEEEEEESSCCCSCCCSSCCEEE-ECCTTSHHHHHHHHTTCTTCCEEEE
T ss_pred CEEEEECCCcHHHHHHHHHHHhC-CCCCCceEEEEEeCCCCccccccCceEEE-EeecCCHHHHHHHHhcCCCCCEEEE
Confidence 6899999754 455677777765 7 7777765432221110 112223 568888888887776655 999987
No 184
>3ajr_A NDP-sugar epimerase; L-threonine dehydrogenase, L-3- hydroxynorvaline, oxidoreductase; HET: NAD; 1.77A {Thermoplasma volcanium} PDB: 3a9w_A* 3a4v_A* 3a1n_A*
Probab=69.67 E-value=11 Score=35.69 Aligned_cols=66 Identities=18% Similarity=0.196 Sum_probs=43.9
Q ss_pred EEEEEeCC-hhHHHHHHHHHhc-CCCcEEEEecCCCCCcCCCCCccccCCCCCCHHHHHHHHHHcCCcEEEE
Q 010065 84 VVLVIGGG-GREHALCYALKRS-HSCDAVFCAPGNAGISNSGDATCIPDLDVLDGDAVISFCRKWSVGLVVV 153 (519)
Q Consensus 84 ~vliiG~g-~~~~~l~~~l~~~-~g~~~v~~~~~~~~~~~~~~~~~v~~~d~~d~~~l~~~~~~~~id~Vi~ 153 (519)
+|||+|+. .....++..|.+. .|++++.++....... ....+ ..|..|.+.+.+++++.++|.||-
T Consensus 1 ~vlVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~---~~~~~-~~D~~d~~~~~~~~~~~~~d~vih 68 (317)
T 3ajr_A 1 MILVTGSSGQIGTELVPYLAEKYGKKNVIASDIVQRDTG---GIKFI-TLDVSNRDEIDRAVEKYSIDAIFH 68 (317)
T ss_dssp CEEEESTTSTTHHHHHHHHHHHHCGGGEEEEESSCCCCT---TCCEE-ECCTTCHHHHHHHHHHTTCCEEEE
T ss_pred CEEEEcCCcHHHHHHHHHHHHhcCCCEEEEecCCCcccc---CceEE-EecCCCHHHHHHHHhhcCCcEEEE
Confidence 58999965 3456678887765 3677776653322111 11223 568888888888888778999997
No 185
>3c1a_A Putative oxidoreductase; ZP_00056571.1, oxidoreductase FAM binding rossmann fold, structural genomics; HET: MSE PG4 PGE; 1.85A {Magnetospirillum magnetotacticum}
Probab=69.49 E-value=1.8 Score=41.84 Aligned_cols=141 Identities=13% Similarity=0.039 Sum_probs=70.3
Q ss_pred CccEEEEEeCChhHHHHHHHHHhcCCCcEEEEecCCCCC-cCCCCCccccCCCCCCHHHHHHHHHHcCCcEEEECCChhh
Q 010065 81 QRVVVLVIGGGGREHALCYALKRSHSCDAVFCAPGNAGI-SNSGDATCIPDLDVLDGDAVISFCRKWSVGLVVVGPEAPL 159 (519)
Q Consensus 81 ~~~~vliiG~g~~~~~l~~~l~~~~g~~~v~~~~~~~~~-~~~~~~~~v~~~d~~d~~~l~~~~~~~~id~Vi~g~E~~~ 159 (519)
++++|.|||.|......+..+.+..+++.+.+.+.++.. ...... + . -..+.+++ ++..++|+|+...-...
T Consensus 9 ~~~~igiIG~G~~g~~~~~~l~~~~~~~~v~v~d~~~~~~~~~~~~--~-~-~~~~~~~~---l~~~~~D~V~i~tp~~~ 81 (315)
T 3c1a_A 9 SPVRLALIGAGRWGKNYIRTIAGLPGAALVRLASSNPDNLALVPPG--C-V-IESDWRSV---VSAPEVEAVIIATPPAT 81 (315)
T ss_dssp CCEEEEEEECTTTTTTHHHHHHHCTTEEEEEEEESCHHHHTTCCTT--C-E-EESSTHHH---HTCTTCCEEEEESCGGG
T ss_pred CcceEEEECCcHHHHHHHHHHHhCCCcEEEEEEeCCHHHHHHHHhh--C-c-ccCCHHHH---hhCCCCCEEEEeCChHH
Confidence 457999999985444456777765567766443322211 111110 1 1 01233333 33457999998543333
Q ss_pred HHHHHHHHHHCCCCeeCCcHHHHHHhcCHHHHHHHHHHcCCCCCCe---eecCCHHHHHHHHHHhCCCEEEEe
Q 010065 160 VSGLANKLVKAGIPTFGPSSEAAALEGSKNFMKNLCDKYGIPTAKY---KTFTDPNAAKQYIQEEGAPIVVKA 229 (519)
Q Consensus 160 ~~~~a~~le~~gip~~g~~~~~~~~~~dK~~~k~~l~~~Gi~~p~~---~~v~~~~~~~~~~~~~g~P~VvKP 229 (519)
...++..+-+.|.+++...+-+... .+-..+.+.+++.|+..-.. ........+.+.++.+|-+..+.-
T Consensus 82 h~~~~~~al~~Gk~v~~eKP~~~~~-~~~~~l~~~a~~~g~~~~~~~~~r~~p~~~~~~~~i~~lG~i~~v~~ 153 (315)
T 3c1a_A 82 HAEITLAAIASGKAVLVEKPLTLDL-AEAEAVAAAAKATGVMVWVEHTQLFNPAWEALKADLTSIGPILAVRS 153 (315)
T ss_dssp HHHHHHHHHHTTCEEEEESSSCSCH-HHHHHHHHHHHHHCCCEEEECGGGGCHHHHHHHHTHHHHCSEEEEEE
T ss_pred HHHHHHHHHHCCCcEEEcCCCcCCH-HHHHHHHHHHHHcCCEEEEeechhcCHHHHHHHHHHHHcCCeEEEEE
Confidence 3344444556787765322221111 11233556677788764211 111123345555557786665553
No 186
>3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis}
Probab=69.40 E-value=5.6 Score=37.42 Aligned_cols=70 Identities=24% Similarity=0.260 Sum_probs=44.7
Q ss_pred ccEEEEEeCC-hhHHHHHHHHHhcCCCcEEEEecCCCCCcCC-----CCCccccCCCCCCHHHHHHHHHHc-----CCcE
Q 010065 82 RVVVLVIGGG-GREHALCYALKRSHSCDAVFCAPGNAGISNS-----GDATCIPDLDVLDGDAVISFCRKW-----SVGL 150 (519)
Q Consensus 82 ~~~vliiG~g-~~~~~l~~~l~~~~g~~~v~~~~~~~~~~~~-----~~~~~v~~~d~~d~~~l~~~~~~~-----~id~ 150 (519)
.++++|+|++ +....+++.|.+. |++++.++.+....... .....+ ..|..|.+.+.+++++. ++|+
T Consensus 5 ~k~vlVTGas~gIG~~~a~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~-~~Dv~~~~~~~~~~~~~~~~~g~id~ 82 (281)
T 3m1a_A 5 AKVWLVTGASSGFGRAIAEAAVAA-GDTVIGTARRTEALDDLVAAYPDRAEAI-SLDVTDGERIDVVAADVLARYGRVDV 82 (281)
T ss_dssp CCEEEETTTTSHHHHHHHHHHHHT-TCEEEEEESSGGGGHHHHHHCTTTEEEE-ECCTTCHHHHHHHHHHHHHHHSCCSE
T ss_pred CcEEEEECCCChHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHhccCCceEE-EeeCCCHHHHHHHHHHHHHhCCCCCE
Confidence 4678999865 4556788888877 88887775432111100 111223 56888877777666543 7999
Q ss_pred EEE
Q 010065 151 VVV 153 (519)
Q Consensus 151 Vi~ 153 (519)
++.
T Consensus 83 lv~ 85 (281)
T 3m1a_A 83 LVN 85 (281)
T ss_dssp EEE
T ss_pred EEE
Confidence 987
No 187
>3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus}
Probab=69.36 E-value=5.6 Score=37.98 Aligned_cols=71 Identities=23% Similarity=0.337 Sum_probs=45.0
Q ss_pred CccEEEEEeCC-hhHHHHHHHHHhcCCCcEEEEecCCCCCcC----C-----CCCccccCCCCCCHHHHHHHHHHc----
Q 010065 81 QRVVVLVIGGG-GREHALCYALKRSHSCDAVFCAPGNAGISN----S-----GDATCIPDLDVLDGDAVISFCRKW---- 146 (519)
Q Consensus 81 ~~~~vliiG~g-~~~~~l~~~l~~~~g~~~v~~~~~~~~~~~----~-----~~~~~v~~~d~~d~~~l~~~~~~~---- 146 (519)
+.++++|+|++ +....+++.|.+. |.++++++.+...... . .....+ ..|..|.+.+.+++++.
T Consensus 40 ~~k~vlVTGas~GIG~aia~~la~~-G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~-~~Dv~d~~~v~~~~~~~~~~~ 117 (293)
T 3rih_A 40 SARSVLVTGGTKGIGRGIATVFARA-GANVAVAARSPRELSSVTAELGELGAGNVIGV-RLDVSDPGSCADAARTVVDAF 117 (293)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHT-TCEEEEEESSGGGGHHHHHHHTTSSSSCEEEE-ECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHC-CCEEEEEECCHHHHHHHHHHHHhhCCCcEEEE-EEeCCCHHHHHHHHHHHHHHc
Confidence 34688999876 4566788888887 8988877643211100 0 111223 57888877776665543
Q ss_pred -CCcEEEE
Q 010065 147 -SVGLVVV 153 (519)
Q Consensus 147 -~id~Vi~ 153 (519)
++|+++.
T Consensus 118 g~iD~lvn 125 (293)
T 3rih_A 118 GALDVVCA 125 (293)
T ss_dssp SCCCEEEE
T ss_pred CCCCEEEE
Confidence 7999987
No 188
>3uxy_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: NAD; 2.10A {Rhodobacter sphaeroides}
Probab=69.33 E-value=12 Score=34.92 Aligned_cols=68 Identities=21% Similarity=0.209 Sum_probs=43.1
Q ss_pred CccEEEEEeCC-hhHHHHHHHHHhcCCCcEEEEecCCCCCcCCCCCccccCCCCCCHHHHHHHHHH-----cCCcEEEE
Q 010065 81 QRVVVLVIGGG-GREHALCYALKRSHSCDAVFCAPGNAGISNSGDATCIPDLDVLDGDAVISFCRK-----WSVGLVVV 153 (519)
Q Consensus 81 ~~~~vliiG~g-~~~~~l~~~l~~~~g~~~v~~~~~~~~~~~~~~~~~v~~~d~~d~~~l~~~~~~-----~~id~Vi~ 153 (519)
+.++++|+|++ +....++..|.+. |.+++.++.+...... ...+ ..|..|.+.+.+++++ .++|+++.
T Consensus 27 ~gk~vlVTGas~gIG~aia~~la~~-G~~V~~~~r~~~~~~~---~~~~-~~Dv~~~~~~~~~~~~~~~~~g~iD~lvn 100 (266)
T 3uxy_A 27 EGKVALVTGAAGGIGGAVVTALRAA-GARVAVADRAVAGIAA---DLHL-PGDLREAAYADGLPGAVAAGLGRLDIVVN 100 (266)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHT-TCEEEECSSCCTTSCC---SEEC-CCCTTSHHHHHHHHHHHHHHHSCCCEEEE
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHC-CCEEEEEeCCHHHHHh---hhcc-CcCCCCHHHHHHHHHHHHHhcCCCCEEEE
Confidence 34678899876 4556788898887 8887766543221111 1222 5677776666655543 27999997
No 189
>1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1dir_A* 1hdr_A*
Probab=69.26 E-value=11 Score=34.54 Aligned_cols=69 Identities=10% Similarity=0.016 Sum_probs=44.1
Q ss_pred CccEEEEEeCC-hhHHHHHHHHHhcCCCcEEEEecCCCCCcCCCCCccccCCCCCCHHHHHHHHHH-------cCCcEEE
Q 010065 81 QRVVVLVIGGG-GREHALCYALKRSHSCDAVFCAPGNAGISNSGDATCIPDLDVLDGDAVISFCRK-------WSVGLVV 152 (519)
Q Consensus 81 ~~~~vliiG~g-~~~~~l~~~l~~~~g~~~v~~~~~~~~~~~~~~~~~v~~~d~~d~~~l~~~~~~-------~~id~Vi 152 (519)
+.++++|+|++ +....+++.|.+. |.+++.++.+..... .....+ ..|..|.+.+.+++++ .++|+++
T Consensus 6 ~~k~vlVTGas~gIG~~ia~~l~~~-G~~V~~~~r~~~~~~--~~~~~~-~~D~~~~~~v~~~~~~~~~~~~~g~iD~lv 81 (241)
T 1dhr_A 6 EARRVLVYGGRGALGSRCVQAFRAR-NWWVASIDVVENEEA--SASVIV-KMTDSFTEQADQVTAEVGKLLGDQKVDAIL 81 (241)
T ss_dssp CCCEEEEETTTSHHHHHHHHHHHTT-TCEEEEEESSCCTTS--SEEEEC-CCCSCHHHHHHHHHHHHHHHHTTCCEEEEE
T ss_pred CCCEEEEECCCcHHHHHHHHHHHhC-CCEEEEEeCChhhcc--CCcEEE-EcCCCCHHHHHHHHHHHHHHhCCCCCCEEE
Confidence 34789999976 4556788888877 888877764422111 111222 5677777666665543 3799999
Q ss_pred E
Q 010065 153 V 153 (519)
Q Consensus 153 ~ 153 (519)
.
T Consensus 82 ~ 82 (241)
T 1dhr_A 82 C 82 (241)
T ss_dssp E
T ss_pred E
Confidence 7
No 190
>3gdg_A Probable NADP-dependent mannitol dehydrogenase; rossmann fold, beta-alpha-beta motifs, open twisted sheet, A NADP, oxidoreductase; 2.30A {Cladosporium herbarum} SCOP: c.2.1.0 PDB: 3gdf_A
Probab=68.91 E-value=7.4 Score=36.18 Aligned_cols=70 Identities=11% Similarity=0.074 Sum_probs=44.9
Q ss_pred ccEEEEEeCC---hhHHHHHHHHHhcCCCcEEEEecCCCCC-cC---------CCCCccccCCCCCCHHHHHHHHHHc--
Q 010065 82 RVVVLVIGGG---GREHALCYALKRSHSCDAVFCAPGNAGI-SN---------SGDATCIPDLDVLDGDAVISFCRKW-- 146 (519)
Q Consensus 82 ~~~vliiG~g---~~~~~l~~~l~~~~g~~~v~~~~~~~~~-~~---------~~~~~~v~~~d~~d~~~l~~~~~~~-- 146 (519)
.++++|+|++ +....+++.|.+. |.++++++..+... .. -.....+ ..|..|.+.+.+++++.
T Consensus 20 ~k~vlITGas~~~giG~~~a~~l~~~-G~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~-~~Dl~~~~~v~~~~~~~~~ 97 (267)
T 3gdg_A 20 GKVVVVTGASGPKGMGIEAARGCAEM-GAAVAITYASRAQGAEENVKELEKTYGIKAKAY-KCQVDSYESCEKLVKDVVA 97 (267)
T ss_dssp TCEEEETTCCSSSSHHHHHHHHHHHT-SCEEEECBSSSSSHHHHHHHHHHHHHCCCEECC-BCCTTCHHHHHHHHHHHHH
T ss_pred CCEEEEECCCCCCChHHHHHHHHHHC-CCeEEEEeCCcchhHHHHHHHHHHhcCCceeEE-ecCCCCHHHHHHHHHHHHH
Confidence 4789999865 5667788999887 88887765432211 00 0011222 56888877776666543
Q ss_pred ---CCcEEEE
Q 010065 147 ---SVGLVVV 153 (519)
Q Consensus 147 ---~id~Vi~ 153 (519)
++|++|.
T Consensus 98 ~~g~id~li~ 107 (267)
T 3gdg_A 98 DFGQIDAFIA 107 (267)
T ss_dssp HTSCCSEEEE
T ss_pred HcCCCCEEEE
Confidence 7999997
No 191
>1uzm_A 3-oxoacyl-[acyl-carrier protein] reductase; beta-ketoacyl reductase, oxidoreductase; 1.49A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1uzn_A* 2ntn_A 1uzl_A
Probab=68.83 E-value=12 Score=34.46 Aligned_cols=68 Identities=25% Similarity=0.260 Sum_probs=43.6
Q ss_pred CccEEEEEeCC-hhHHHHHHHHHhcCCCcEEEEecCCCCCcCCCCCccccCCCCCCHHHHHHHHHH-----cCCcEEEE
Q 010065 81 QRVVVLVIGGG-GREHALCYALKRSHSCDAVFCAPGNAGISNSGDATCIPDLDVLDGDAVISFCRK-----WSVGLVVV 153 (519)
Q Consensus 81 ~~~~vliiG~g-~~~~~l~~~l~~~~g~~~v~~~~~~~~~~~~~~~~~v~~~d~~d~~~l~~~~~~-----~~id~Vi~ 153 (519)
..++++|+|++ +....+++.|.+. |.+++.++.+....... ..+ ..|..|.+.+.+++++ .++|.++.
T Consensus 14 ~~k~vlVTGas~gIG~~ia~~l~~~-G~~V~~~~r~~~~~~~~---~~~-~~D~~~~~~~~~~~~~~~~~~g~id~lv~ 87 (247)
T 1uzm_A 14 VSRSVLVTGGNRGIGLAIAQRLAAD-GHKVAVTHRGSGAPKGL---FGV-EVDVTDSDAVDRAFTAVEEHQGPVEVLVS 87 (247)
T ss_dssp CCCEEEETTTTSHHHHHHHHHHHHT-TCEEEEEESSSCCCTTS---EEE-ECCTTCHHHHHHHHHHHHHHHSSCSEEEE
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHC-CCEEEEEeCChHHHHHh---cCe-eccCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence 34689999866 4556788888887 88887765432211111 113 5677887776666554 26899987
No 192
>4b8w_A GDP-L-fucose synthase; oxidoreductase; HET: NAP GDP; 2.75A {Homo sapiens}
Probab=68.74 E-value=9 Score=36.15 Aligned_cols=62 Identities=19% Similarity=0.161 Sum_probs=41.0
Q ss_pred CccEEEEEeCCh-hHHHHHHHHHhcCCCcEEEEecCCCCCcCCCCCccccCCCCCCHHHHHHHHHHcCCcEEEE
Q 010065 81 QRVVVLVIGGGG-REHALCYALKRSHSCDAVFCAPGNAGISNSGDATCIPDLDVLDGDAVISFCRKWSVGLVVV 153 (519)
Q Consensus 81 ~~~~vliiG~g~-~~~~l~~~l~~~~g~~~v~~~~~~~~~~~~~~~~~v~~~d~~d~~~l~~~~~~~~id~Vi~ 153 (519)
.+|+|||+|+.| ....++..|.+. |. .... . ......+ ..|..|.+.+.++++..++|.||-
T Consensus 5 ~~~~vlVtGatG~iG~~l~~~L~~~-g~------~~~~--~-~~~~~~~-~~D~~d~~~~~~~~~~~~~d~Vih 67 (319)
T 4b8w_A 5 QSMRILVTGGSGLVGKAIQKVVADG-AG------LPGE--D-WVFVSSK-DADLTDTAQTRALFEKVQPTHVIH 67 (319)
T ss_dssp CCCEEEEETCSSHHHHHHHHHHHTT-TC------CTTC--E-EEECCTT-TCCTTSHHHHHHHHHHSCCSEEEE
T ss_pred cCCeEEEECCCcHHHHHHHHHHHhc-CC------cccc--c-ccccCce-ecccCCHHHHHHHHhhcCCCEEEE
Confidence 468999999754 456678888766 54 0000 0 0001122 568888899999888888999997
No 193
>3eag_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME diaminopimelate ligase; UDP-N-acetylmuramate:L-alanyl-G glutamyl-MESO-diaminopimelate ligase; 2.55A {Neisseria meningitidis MC58}
Probab=68.70 E-value=20 Score=34.71 Aligned_cols=34 Identities=21% Similarity=0.244 Sum_probs=26.1
Q ss_pred CccEEEEEeCChhHH-HHHHHHHhcCCCcEEEEecC
Q 010065 81 QRVVVLVIGGGGREH-ALCYALKRSHSCDAVFCAPG 115 (519)
Q Consensus 81 ~~~~vliiG~g~~~~-~l~~~l~~~~g~~~v~~~~~ 115 (519)
++++|+++|.|+... .++..|++. |+++...|..
T Consensus 3 ~~~~i~~iGiGg~Gms~~A~~L~~~-G~~V~~~D~~ 37 (326)
T 3eag_A 3 AMKHIHIIGIGGTFMGGLAAIAKEA-GFEVSGCDAK 37 (326)
T ss_dssp CCCEEEEESCCSHHHHHHHHHHHHT-TCEEEEEESS
T ss_pred CCcEEEEEEECHHHHHHHHHHHHhC-CCEEEEEcCC
Confidence 467999999998766 367777776 9988877643
No 194
>3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens}
Probab=68.60 E-value=5.8 Score=36.92 Aligned_cols=71 Identities=17% Similarity=0.220 Sum_probs=44.6
Q ss_pred CccEEEEEeCC-hhHHHHHHHHHhcCCCcEEEEecCCCCCc----CC-CCCccccCCCCCCHHHHHHHHHHc-----CCc
Q 010065 81 QRVVVLVIGGG-GREHALCYALKRSHSCDAVFCAPGNAGIS----NS-GDATCIPDLDVLDGDAVISFCRKW-----SVG 149 (519)
Q Consensus 81 ~~~~vliiG~g-~~~~~l~~~l~~~~g~~~v~~~~~~~~~~----~~-~~~~~v~~~d~~d~~~l~~~~~~~-----~id 149 (519)
+.++++|+|++ +....++..|.+. |++++.++.+..... .. .....+ ..|..|.+.+.+++++. ++|
T Consensus 11 ~~k~vlVTGas~gIG~~ia~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~-~~D~~d~~~v~~~~~~~~~~~g~iD 88 (263)
T 3ak4_A 11 SGRKAIVTGGSKGIGAAIARALDKA-GATVAIADLDVMAAQAVVAGLENGGFAV-EVDVTKRASVDAAMQKAIDALGGFD 88 (263)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHTCTTCCEEE-ECCTTCHHHHHHHHHHHHHHHTCCC
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHHhcCCeEE-EEeCCCHHHHHHHHHHHHHHcCCCC
Confidence 35789999976 3556788888887 888877654311100 00 011223 56888877776666542 799
Q ss_pred EEEE
Q 010065 150 LVVV 153 (519)
Q Consensus 150 ~Vi~ 153 (519)
++|.
T Consensus 89 ~lv~ 92 (263)
T 3ak4_A 89 LLCA 92 (263)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 9997
No 195
>3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV}
Probab=68.51 E-value=15 Score=34.31 Aligned_cols=71 Identities=13% Similarity=0.202 Sum_probs=43.7
Q ss_pred CccEEEEEeCC-hhHHHHHHHHHhcCCCcEEEEecCCCCCcCCC---------------CCccccCCCCCCHHHHHHHHH
Q 010065 81 QRVVVLVIGGG-GREHALCYALKRSHSCDAVFCAPGNAGISNSG---------------DATCIPDLDVLDGDAVISFCR 144 (519)
Q Consensus 81 ~~~~vliiG~g-~~~~~l~~~l~~~~g~~~v~~~~~~~~~~~~~---------------~~~~v~~~d~~d~~~l~~~~~ 144 (519)
+.++++|+|++ +....+++.|.+. |.++++++.+........ ....+ ..|..|.+.+.++++
T Consensus 5 ~~k~~lVTGas~GIG~aia~~la~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~Dv~~~~~v~~~~~ 82 (274)
T 3e03_A 5 SGKTLFITGASRGIGLAIALRAARD-GANVAIAAKSAVANPKLPGTIHSAAAAVNAAGGQGLAL-KCDIREEDQVRAAVA 82 (274)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHT-TCEEEEEESCCSCCTTSCCCHHHHHHHHHHHTSEEEEE-ECCTTCHHHHHHHHH
T ss_pred CCcEEEEECCCChHHHHHHHHHHHC-CCEEEEEeccchhhhhhHHHHHHHHHHHHhcCCeEEEE-eCCCCCHHHHHHHHH
Confidence 35789999976 4556788888887 888877764422111000 01112 467777776666655
Q ss_pred Hc-----CCcEEEE
Q 010065 145 KW-----SVGLVVV 153 (519)
Q Consensus 145 ~~-----~id~Vi~ 153 (519)
+. ++|+++.
T Consensus 83 ~~~~~~g~iD~lvn 96 (274)
T 3e03_A 83 ATVDTFGGIDILVN 96 (274)
T ss_dssp HHHHHHSCCCEEEE
T ss_pred HHHHHcCCCCEEEE
Confidence 42 6888887
No 196
>2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D
Probab=68.40 E-value=7.7 Score=36.32 Aligned_cols=68 Identities=9% Similarity=0.005 Sum_probs=42.1
Q ss_pred cEEEEEeCC-hhHHHHHHHHHhc-CCCcEEEEecCCCCCcCC--CCCccccCCCCCCHHHHHHHHHHcCCcEEEE
Q 010065 83 VVVLVIGGG-GREHALCYALKRS-HSCDAVFCAPGNAGISNS--GDATCIPDLDVLDGDAVISFCRKWSVGLVVV 153 (519)
Q Consensus 83 ~~vliiG~g-~~~~~l~~~l~~~-~g~~~v~~~~~~~~~~~~--~~~~~v~~~d~~d~~~l~~~~~~~~id~Vi~ 153 (519)
|+|+|+|+. .....++..|.+. .|++++.++.+....... .....+ ..|..|.+.+.+.++ ++|.||.
T Consensus 1 ~~ilVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~l~~~~~~~~-~~D~~d~~~l~~~~~--~~d~vi~ 72 (287)
T 2jl1_A 1 FSIAVTGATGQLGGLVIQHLLKKVPASQIIAIVRNVEKASTLADQGVEVR-HGDYNQPESLQKAFA--GVSKLLF 72 (287)
T ss_dssp CCEEETTTTSHHHHHHHHHHTTTSCGGGEEEEESCTTTTHHHHHTTCEEE-ECCTTCHHHHHHHTT--TCSEEEE
T ss_pred CeEEEEcCCchHHHHHHHHHHHhCCCCeEEEEEcCHHHHhHHhhcCCeEE-EeccCCHHHHHHHHh--cCCEEEE
Confidence 479999975 4456678887754 378887776432211100 112223 568888888777664 5899986
No 197
>2hrz_A AGR_C_4963P, nucleoside-diphosphate-sugar epimerase; agrobacterium tumefa structural genomics, PSI-2, protein structure initiative; 1.85A {Agrobacterium tumefaciens}
Probab=68.30 E-value=12 Score=35.93 Aligned_cols=70 Identities=11% Similarity=0.061 Sum_probs=42.2
Q ss_pred CccEEEEEeCC-hhHHHHHHHHHhcCC-------CcEEEEecCCCCCcC--CCCCccccCCCCCCHHHHHHHHHHcCCcE
Q 010065 81 QRVVVLVIGGG-GREHALCYALKRSHS-------CDAVFCAPGNAGISN--SGDATCIPDLDVLDGDAVISFCRKWSVGL 150 (519)
Q Consensus 81 ~~~~vliiG~g-~~~~~l~~~l~~~~g-------~~~v~~~~~~~~~~~--~~~~~~v~~~d~~d~~~l~~~~~~~~id~ 150 (519)
+.|+|||+|+. .....++..|.+. | ++++.++........ ......+ ..|..|.+.+.++++ .++|+
T Consensus 13 ~~~~vlVtGa~G~iG~~l~~~L~~~-g~~~~r~~~~V~~~~r~~~~~~~~~~~~~~~~-~~Dl~d~~~~~~~~~-~~~d~ 89 (342)
T 2hrz_A 13 QGMHIAIIGAAGMVGRKLTQRLVKD-GSLGGKPVEKFTLIDVFQPEAPAGFSGAVDAR-AADLSAPGEAEKLVE-ARPDV 89 (342)
T ss_dssp SCEEEEEETTTSHHHHHHHHHHHHH-CEETTEEEEEEEEEESSCCCCCTTCCSEEEEE-ECCTTSTTHHHHHHH-TCCSE
T ss_pred cCCEEEEECCCcHHHHHHHHHHHhc-CCcccCCCceEEEEEccCCccccccCCceeEE-EcCCCCHHHHHHHHh-cCCCE
Confidence 45789999965 4556788888877 7 666666543211110 0111222 457777666666554 47999
Q ss_pred EEE
Q 010065 151 VVV 153 (519)
Q Consensus 151 Vi~ 153 (519)
||-
T Consensus 90 vih 92 (342)
T 2hrz_A 90 IFH 92 (342)
T ss_dssp EEE
T ss_pred EEE
Confidence 997
No 198
>1iuk_A Hypothetical protein TT1466; structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; 1.70A {Thermus thermophilus} SCOP: c.2.1.8 PDB: 1iul_A
Probab=67.97 E-value=22 Score=29.74 Aligned_cols=34 Identities=18% Similarity=0.218 Sum_probs=23.9
Q ss_pred CccEEEEEeCC----hhHHHHHHHHHhcCCCcEEEEecC
Q 010065 81 QRVVVLVIGGG----GREHALCYALKRSHSCDAVFCAPG 115 (519)
Q Consensus 81 ~~~~vliiG~g----~~~~~l~~~l~~~~g~~~v~~~~~ 115 (519)
+.++|.|+|.+ ...+.+++.|.+. |++++.++|.
T Consensus 12 ~p~~vaVvGas~~~g~~G~~~~~~l~~~-G~~v~~vnp~ 49 (140)
T 1iuk_A 12 QAKTIAVLGAHKDPSRPAHYVPRYLREQ-GYRVLPVNPR 49 (140)
T ss_dssp HCCEEEEETCCSSTTSHHHHHHHHHHHT-TCEEEEECGG
T ss_pred CCCEEEEECCCCCCCChHHHHHHHHHHC-CCEEEEeCCC
Confidence 35689999985 3345677777766 8986666665
No 199
>1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A
Probab=67.74 E-value=42 Score=31.01 Aligned_cols=114 Identities=15% Similarity=0.176 Sum_probs=56.8
Q ss_pred ccEEEEEeCChhHHHHHHHHHhcCCCcEEEEecCC-CCCcCCCCCccc--cCCCCCCHHHHHHHHHHcCCcEEEEC-CCh
Q 010065 82 RVVVLVIGGGGREHALCYALKRSHSCDAVFCAPGN-AGISNSGDATCI--PDLDVLDGDAVISFCRKWSVGLVVVG-PEA 157 (519)
Q Consensus 82 ~~~vliiG~g~~~~~l~~~l~~~~g~~~v~~~~~~-~~~~~~~~~~~v--~~~d~~d~~~l~~~~~~~~id~Vi~g-~E~ 157 (519)
..+|+|+|.|+....++..|... |+..+.+.+.+ ...........+ ..+.....+.+.+.+++.+++.-+.. .+.
T Consensus 28 ~~~VlvvG~GglG~~va~~La~~-Gvg~i~lvD~d~v~~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~~~v~~~~~~ 106 (251)
T 1zud_1 28 DSQVLIIGLGGLGTPAALYLAGA-GVGTLVLADDDDVHLSNLQRQILFTTEDIDRPKSQVSQQRLTQLNPDIQLTALQQR 106 (251)
T ss_dssp TCEEEEECCSTTHHHHHHHHHHT-TCSEEEEECCCBCCGGGTTTCTTCCGGGTTSBHHHHHHHHHHHHCTTSEEEEECSC
T ss_pred cCcEEEEccCHHHHHHHHHHHHc-CCCeEEEEeCCCcccccCCCCccCChhhCCCHHHHHHHHHHHHHCCCCEEEEEecc
Confidence 46899999998877889999877 88766554322 111111100000 01122235666666666665533321 111
Q ss_pred hhHHHHHHHHHHCCCCeeCCcHHHHHHhcCHHHHHHHHHHcCCC
Q 010065 158 PLVSGLANKLVKAGIPTFGPSSEAAALEGSKNFMKNLCDKYGIP 201 (519)
Q Consensus 158 ~~~~~~a~~le~~gip~~g~~~~~~~~~~dK~~~k~~l~~~Gi~ 201 (519)
.....+.+.+....+-+...+... .+....+.+.+.++|
T Consensus 107 ~~~~~~~~~~~~~DvVi~~~d~~~-----~r~~l~~~~~~~~~p 145 (251)
T 1zud_1 107 LTGEALKDAVARADVVLDCTDNMA-----TRQEINAACVALNTP 145 (251)
T ss_dssp CCHHHHHHHHHHCSEEEECCSSHH-----HHHHHHHHHHHTTCC
T ss_pred CCHHHHHHHHhcCCEEEECCCCHH-----HHHHHHHHHHHhCCC
Confidence 111123344666665443333222 144455556666655
No 200
>4amg_A Snogd; transferase, polyketide biosynthesis, GT1 family, nogalamyci; HET: MLY; 2.59A {Streptomyces nogalater} PDB: 4an4_A* 4amb_A*
Probab=67.52 E-value=24 Score=34.47 Aligned_cols=42 Identities=17% Similarity=0.141 Sum_probs=26.3
Q ss_pred cccCCCCCCCccEEEEEeCChhH-----HHHHHHHHhcCCCcEEEEec
Q 010065 72 SVNAPTNAGQRVVVLVIGGGGRE-----HALCYALKRSHSCDAVFCAP 114 (519)
Q Consensus 72 S~~s~~~~~~~~~vliiG~g~~~-----~~l~~~l~~~~g~~~v~~~~ 114 (519)
++-|.+.-.+.||||++..++.. .++++.|++. |+++.++.+
T Consensus 12 ~~g~~~~~~~~MRIL~~~~p~~GHv~P~l~LA~~L~~r-Gh~Vt~~t~ 58 (400)
T 4amg_A 12 DLGTENLYFQSMRALFITSPGLSHILPTVPLAQALRAL-GHEVRYATG 58 (400)
T ss_dssp ---------CCCEEEEECCSSHHHHGGGHHHHHHHHHT-TCEEEEEEC
T ss_pred cCCcccCCCCCCeEEEECCCchhHHHHHHHHHHHHHHC-CCEEEEEeC
Confidence 33344333467899998776543 6789999988 999988764
No 201
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=67.18 E-value=7.2 Score=35.22 Aligned_cols=109 Identities=18% Similarity=0.162 Sum_probs=59.7
Q ss_pred cEEEEEeCChhHHHHHHHHHhcCCCcEEEEecCCCCCcCC---CCCccccCCCCCCHHHHHHHHHHcCCcEEEEC-CChh
Q 010065 83 VVVLVIGGGGREHALCYALKRSHSCDAVFCAPGNAGISNS---GDATCIPDLDVLDGDAVISFCRKWSVGLVVVG-PEAP 158 (519)
Q Consensus 83 ~~vliiG~g~~~~~l~~~l~~~~g~~~v~~~~~~~~~~~~---~~~~~v~~~d~~d~~~l~~~~~~~~id~Vi~g-~E~~ 158 (519)
|+|+|+|.|.....+++.|.+. |+++++++.+....... .....+ ..|..+.+.+.+. .-.+.|.|+.. +++.
T Consensus 1 M~iiIiG~G~~G~~la~~L~~~-g~~v~vid~~~~~~~~l~~~~~~~~i-~gd~~~~~~l~~a-~i~~ad~vi~~~~~d~ 77 (218)
T 3l4b_C 1 MKVIIIGGETTAYYLARSMLSR-KYGVVIINKDRELCEEFAKKLKATII-HGDGSHKEILRDA-EVSKNDVVVILTPRDE 77 (218)
T ss_dssp CCEEEECCHHHHHHHHHHHHHT-TCCEEEEESCHHHHHHHHHHSSSEEE-ESCTTSHHHHHHH-TCCTTCEEEECCSCHH
T ss_pred CEEEEECCCHHHHHHHHHHHhC-CCeEEEEECCHHHHHHHHHHcCCeEE-EcCCCCHHHHHhc-CcccCCEEEEecCCcH
Confidence 5799999987777788888877 89998887542111110 011222 4566776655432 22468888884 4444
Q ss_pred hHHHHHHHHHH-CCCCeeCCcHHHHHHhcCHHHHHHHHHHcCCC
Q 010065 159 LVSGLANKLVK-AGIPTFGPSSEAAALEGSKNFMKNLCDKYGIP 201 (519)
Q Consensus 159 ~~~~~a~~le~-~gip~~g~~~~~~~~~~dK~~~k~~l~~~Gi~ 201 (519)
....++..+.. .+.+.+ +....|.. ..+.+++.|+.
T Consensus 78 ~n~~~~~~a~~~~~~~~i------ia~~~~~~-~~~~l~~~G~d 114 (218)
T 3l4b_C 78 VNLFIAQLVMKDFGVKRV------VSLVNDPG-NMEIFKKMGIT 114 (218)
T ss_dssp HHHHHHHHHHHTSCCCEE------EECCCSGG-GHHHHHHHTCE
T ss_pred HHHHHHHHHHHHcCCCeE------EEEEeCcc-hHHHHHHCCCC
Confidence 33233333443 454322 11223332 23456777865
No 202
>4iin_A 3-ketoacyl-acyl carrier protein reductase (FABG); structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.40A {Helicobacter pylori} PDB: 4ijk_A
Probab=67.07 E-value=5.2 Score=37.52 Aligned_cols=71 Identities=17% Similarity=0.177 Sum_probs=44.5
Q ss_pred CccEEEEEeCC-hhHHHHHHHHHhcCCCcEEEEecCCCCC-cC--------CCCCccccCCCCCCHHHHHHHHHHc----
Q 010065 81 QRVVVLVIGGG-GREHALCYALKRSHSCDAVFCAPGNAGI-SN--------SGDATCIPDLDVLDGDAVISFCRKW---- 146 (519)
Q Consensus 81 ~~~~vliiG~g-~~~~~l~~~l~~~~g~~~v~~~~~~~~~-~~--------~~~~~~v~~~d~~d~~~l~~~~~~~---- 146 (519)
..++++|+|++ +....+++.|.+. |.+++.++..+... .. ......+ ..|..|.+.+.+++++.
T Consensus 28 ~~k~vlITGas~gIG~~la~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~-~~D~~~~~~v~~~~~~~~~~~ 105 (271)
T 4iin_A 28 TGKNVLITGASKGIGAEIAKTLASM-GLKVWINYRSNAEVADALKNELEEKGYKAAVI-KFDAASESDFIEAIQTIVQSD 105 (271)
T ss_dssp SCCEEEETTCSSHHHHHHHHHHHHT-TCEEEEEESSCHHHHHHHHHHHHHTTCCEEEE-ECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHC-CCEEEEEeCCCHHHHHHHHHHHHhcCCceEEE-ECCCCCHHHHHHHHHHHHHhc
Confidence 34689999876 4556788888877 89887775432111 00 0011222 56888877766666542
Q ss_pred -CCcEEEE
Q 010065 147 -SVGLVVV 153 (519)
Q Consensus 147 -~id~Vi~ 153 (519)
++|+++.
T Consensus 106 g~id~li~ 113 (271)
T 4iin_A 106 GGLSYLVN 113 (271)
T ss_dssp SSCCEEEE
T ss_pred CCCCEEEE
Confidence 7999997
No 203
>2ho3_A Oxidoreductase, GFO/IDH/MOCA family; streptococcus pneumonia reductive methylation, structural genomics, PSI-2, protein initiative; HET: MLY; 2.00A {Streptococcus pneumoniae} PDB: 2ho5_A
Probab=66.95 E-value=4.5 Score=39.20 Aligned_cols=89 Identities=19% Similarity=0.095 Sum_probs=48.0
Q ss_pred ccEEEEEeCChhHHHHHHHHHhcCCCcEEEEecCCCCCcCCCCCccccC-CCCCCHHHHHHHHHHcCCcEEEECCChhhH
Q 010065 82 RVVVLVIGGGGREHALCYALKRSHSCDAVFCAPGNAGISNSGDATCIPD-LDVLDGDAVISFCRKWSVGLVVVGPEAPLV 160 (519)
Q Consensus 82 ~~~vliiG~g~~~~~l~~~l~~~~g~~~v~~~~~~~~~~~~~~~~~v~~-~d~~d~~~l~~~~~~~~id~Vi~g~E~~~~ 160 (519)
+++|.|||.|......+..+.+..+++.+.+.+.+...... ....... .-..+.+++ + ..++|+|+...-...-
T Consensus 1 ~~~vgiiG~G~~g~~~~~~l~~~~~~~~~~v~d~~~~~~~~-~~~~~~~~~~~~~~~~~---l-~~~~D~V~i~tp~~~h 75 (325)
T 2ho3_A 1 MLKLGVIGTGAISHHFIEAAHTSGEYQLVAIYSRKLETAAT-FASRYQNIQLFDQLEVF---F-KSSFDLVYIASPNSLH 75 (325)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTSEEEEEEECSSHHHHHH-HGGGSSSCEEESCHHHH---H-TSSCSEEEECSCGGGH
T ss_pred CeEEEEEeCCHHHHHHHHHHHhCCCeEEEEEEeCCHHHHHH-HHHHcCCCeEeCCHHHH---h-CCCCCEEEEeCChHHH
Confidence 36899999997655567777766566666553332211000 0011100 012345544 3 4679999986544443
Q ss_pred HHHHHHHHHCCCCee
Q 010065 161 SGLANKLVKAGIPTF 175 (519)
Q Consensus 161 ~~~a~~le~~gip~~ 175 (519)
..++..+-+.|.+++
T Consensus 76 ~~~~~~al~~gk~V~ 90 (325)
T 2ho3_A 76 FAQAKAALSAGKHVI 90 (325)
T ss_dssp HHHHHHHHHTTCEEE
T ss_pred HHHHHHHHHcCCcEE
Confidence 344445556787765
No 204
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=66.88 E-value=17 Score=33.20 Aligned_cols=34 Identities=24% Similarity=0.318 Sum_probs=25.4
Q ss_pred CccEEEEEeCChhHHHHHHHHHhcCCCcEEEEecC
Q 010065 81 QRVVVLVIGGGGREHALCYALKRSHSCDAVFCAPG 115 (519)
Q Consensus 81 ~~~~vliiG~g~~~~~l~~~l~~~~g~~~v~~~~~ 115 (519)
+.++|||+|+|......+..|.+. |.+++++++.
T Consensus 30 ~gk~VLVVGgG~va~~ka~~Ll~~-GA~VtVvap~ 63 (223)
T 3dfz_A 30 KGRSVLVVGGGTIATRRIKGFLQE-GAAITVVAPT 63 (223)
T ss_dssp TTCCEEEECCSHHHHHHHHHHGGG-CCCEEEECSS
T ss_pred CCCEEEEECCCHHHHHHHHHHHHC-CCEEEEECCC
Confidence 357999999996555556777766 8888888654
No 205
>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}
Probab=66.14 E-value=8.3 Score=35.69 Aligned_cols=71 Identities=15% Similarity=0.202 Sum_probs=44.8
Q ss_pred CccEEEEEeCC-hhHHHHHHHHHhcCCCcEEEEecCCCCCcCC--------CCCccccCCCCCCHHHHHHHHHHc----C
Q 010065 81 QRVVVLVIGGG-GREHALCYALKRSHSCDAVFCAPGNAGISNS--------GDATCIPDLDVLDGDAVISFCRKW----S 147 (519)
Q Consensus 81 ~~~~vliiG~g-~~~~~l~~~l~~~~g~~~v~~~~~~~~~~~~--------~~~~~v~~~d~~d~~~l~~~~~~~----~ 147 (519)
+.++++|+|++ +....++..|.+. |.++++++.+....... .....+ ..|..|.+.+.+++++. +
T Consensus 6 ~~k~vlVTGas~GIG~aia~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~-~~Dv~~~~~v~~~~~~~~~~g~ 83 (252)
T 3h7a_A 6 RNATVAVIGAGDYIGAEIAKKFAAE-GFTVFAGRRNGEKLAPLVAEIEAAGGRIVAR-SLDARNEDEVTAFLNAADAHAP 83 (252)
T ss_dssp CSCEEEEECCSSHHHHHHHHHHHHT-TCEEEEEESSGGGGHHHHHHHHHTTCEEEEE-ECCTTCHHHHHHHHHHHHHHSC
T ss_pred CCCEEEEECCCchHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHHHhcCCeEEEE-ECcCCCHHHHHHHHHHHHhhCC
Confidence 35789999976 4567788999887 89888776432111100 011122 56888877776665543 7
Q ss_pred CcEEEE
Q 010065 148 VGLVVV 153 (519)
Q Consensus 148 id~Vi~ 153 (519)
+|+++.
T Consensus 84 id~lv~ 89 (252)
T 3h7a_A 84 LEVTIF 89 (252)
T ss_dssp EEEEEE
T ss_pred ceEEEE
Confidence 898887
No 206
>4hkt_A Inositol 2-dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium, oxidoreductase; HET: MSE; 2.00A {Sinorhizobium meliloti}
Probab=66.09 E-value=3 Score=40.58 Aligned_cols=140 Identities=14% Similarity=0.055 Sum_probs=72.2
Q ss_pred ccEEEEEeCChhHHHHHHHHHhcCCCcEEEEecCCCCC-cCCCCCccccCCCCCCHHHHHHHHHHcCCcEEEECCChhhH
Q 010065 82 RVVVLVIGGGGREHALCYALKRSHSCDAVFCAPGNAGI-SNSGDATCIPDLDVLDGDAVISFCRKWSVGLVVVGPEAPLV 160 (519)
Q Consensus 82 ~~~vliiG~g~~~~~l~~~l~~~~g~~~v~~~~~~~~~-~~~~~~~~v~~~d~~d~~~l~~~~~~~~id~Vi~g~E~~~~ 160 (519)
+++|.|||.|......+..+.+..+++++.+.+.++.. ... .... .+...+.+++ +...++|+|+...-...-
T Consensus 3 ~~~vgiiG~G~~g~~~~~~l~~~~~~~l~av~d~~~~~~~~~--~~~~-~~~~~~~~~~---l~~~~~D~V~i~tp~~~h 76 (331)
T 4hkt_A 3 TVRFGLLGAGRIGKVHAKAVSGNADARLVAVADAFPAAAEAI--AGAY-GCEVRTIDAI---EAAADIDAVVICTPTDTH 76 (331)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHCTTEEEEEEECSSHHHHHHH--HHHT-TCEECCHHHH---HHCTTCCEEEECSCGGGH
T ss_pred ceEEEEECCCHHHHHHHHHHhhCCCcEEEEEECCCHHHHHHH--HHHh-CCCcCCHHHH---hcCCCCCEEEEeCCchhH
Confidence 47999999997655667777776677776553322211 000 0111 1113455544 445579999986444433
Q ss_pred HHHHHHHHHCCCCeeCCcHHHHHHhcCHHHHHHHHHHcCCCCCCee-ecC--CHHHHHHHHHH--hCCCEEEE
Q 010065 161 SGLANKLVKAGIPTFGPSSEAAALEGSKNFMKNLCDKYGIPTAKYK-TFT--DPNAAKQYIQE--EGAPIVVK 228 (519)
Q Consensus 161 ~~~a~~le~~gip~~g~~~~~~~~~~dK~~~k~~l~~~Gi~~p~~~-~v~--~~~~~~~~~~~--~g~P~VvK 228 (519)
..++..+-+.|.+++.-.+-+... .+-..+.+.+++.|+..--.. .-. ....+.+.+++ +|-+..+.
T Consensus 77 ~~~~~~al~~gk~v~~EKP~~~~~-~~~~~l~~~a~~~g~~~~v~~~~r~~p~~~~~~~~i~~g~iG~i~~~~ 148 (331)
T 4hkt_A 77 ADLIERFARAGKAIFCEKPIDLDA-ERVRACLKVVSDTKAKLMVGFNRRFDPHFMAVRKAIDDGRIGEVEMVT 148 (331)
T ss_dssp HHHHHHHHHTTCEEEECSCSCSSH-HHHHHHHHHHHHTTCCEEECCGGGGCHHHHHHHHHHHTTTTCSEEEEE
T ss_pred HHHHHHHHHcCCcEEEecCCCCCH-HHHHHHHHHHHHcCCeEEEcccccCCHHHHHHHHHHHcCCCCceEEEE
Confidence 344555566788776332221111 112235566777776542111 111 22345555544 66665554
No 207
>1ooe_A Dihydropteridine reductase; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics; HET: MES; 1.65A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=65.71 E-value=11 Score=34.16 Aligned_cols=68 Identities=15% Similarity=0.048 Sum_probs=42.9
Q ss_pred ccEEEEEeCC-hhHHHHHHHHHhcCCCcEEEEecCCCCCcCCCCCccccCCCCCCHHHHHHHHHH-------cCCcEEEE
Q 010065 82 RVVVLVIGGG-GREHALCYALKRSHSCDAVFCAPGNAGISNSGDATCIPDLDVLDGDAVISFCRK-------WSVGLVVV 153 (519)
Q Consensus 82 ~~~vliiG~g-~~~~~l~~~l~~~~g~~~v~~~~~~~~~~~~~~~~~v~~~d~~d~~~l~~~~~~-------~~id~Vi~ 153 (519)
.++++|+|++ +....+++.|.+. |++++.++.+..... .....+ ..|..|.+.+.+++++ .++|+++.
T Consensus 3 ~k~vlITGas~gIG~~~a~~l~~~-G~~V~~~~r~~~~~~--~~~~~~-~~D~~~~~~~~~~~~~~~~~~~~g~id~lv~ 78 (236)
T 1ooe_A 3 SGKVIVYGGKGALGSAILEFFKKN-GYTVLNIDLSANDQA--DSNILV-DGNKNWTEQEQSILEQTASSLQGSQVDGVFC 78 (236)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHHT-TEEEEEEESSCCTTS--SEEEEC-CTTSCHHHHHHHHHHHHHHHHTTCCEEEEEE
T ss_pred CCEEEEECCCcHHHHHHHHHHHHC-CCEEEEEecCccccc--cccEEE-eCCCCCHHHHHHHHHHHHHHhCCCCCCEEEE
Confidence 3679999966 4556788888887 888877754422111 111222 5677776666555443 27999997
No 208
>2vt3_A REX, redox-sensing transcriptional repressor REX; transcriptional regulation, redox poise; HET: ATP; 2.0A {Bacillus subtilis} PDB: 2vt2_A*
Probab=65.70 E-value=7.1 Score=35.58 Aligned_cols=87 Identities=15% Similarity=0.202 Sum_probs=43.3
Q ss_pred CccEEEEEeCChhHHHHHHH-HHhcCCCcEEEEecCCCCCcCCCCCccccCCCCCCHHHHHHHHHHcCCcEEEECCChhh
Q 010065 81 QRVVVLVIGGGGREHALCYA-LKRSHSCDAVFCAPGNAGISNSGDATCIPDLDVLDGDAVISFCRKWSVGLVVVGPEAPL 159 (519)
Q Consensus 81 ~~~~vliiG~g~~~~~l~~~-l~~~~g~~~v~~~~~~~~~~~~~~~~~v~~~d~~d~~~l~~~~~~~~id~Vi~g~E~~~ 159 (519)
++++|+|+|+|.....++.. .....|++.+.+-+.++...... ...++.....+ +.+++++. |.++...-...
T Consensus 84 ~~~rV~IIGAG~~G~~La~~~~~~~~g~~iVg~~D~dp~k~g~~-i~gv~V~~~~d---l~eli~~~--D~ViIAvPs~~ 157 (215)
T 2vt3_A 84 EMTDVILIGVGNLGTAFLHYNFTKNNNTKISMAFDINESKIGTE-VGGVPVYNLDD---LEQHVKDE--SVAILTVPAVA 157 (215)
T ss_dssp ---CEEEECCSHHHHHHHHCC------CCEEEEEESCTTTTTCE-ETTEEEEEGGG---HHHHCSSC--CEEEECSCHHH
T ss_pred CCCEEEEEccCHHHHHHHHHHhcccCCcEEEEEEeCCHHHHHhH-hcCCeeechhh---HHHHHHhC--CEEEEecCchh
Confidence 34689999999655555553 22233777776655544322110 01111112233 44444443 88887544444
Q ss_pred HHHHHHHHHHCCCC
Q 010065 160 VSGLANKLVKAGIP 173 (519)
Q Consensus 160 ~~~~a~~le~~gip 173 (519)
.+.+++.+...|++
T Consensus 158 ~~ei~~~l~~aGi~ 171 (215)
T 2vt3_A 158 AQSITDRLVALGIK 171 (215)
T ss_dssp HHHHHHHHHHTTCC
T ss_pred HHHHHHHHHHcCCC
Confidence 45677778888877
No 209
>3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A*
Probab=65.43 E-value=8.6 Score=35.31 Aligned_cols=70 Identities=19% Similarity=0.302 Sum_probs=44.2
Q ss_pred ccEEEEEeCC-hhHHHHHHHHHhcCCCcEEEEecC-CCCCcCC--------CCCccccCCCCCCHHHHHHHHHHc-----
Q 010065 82 RVVVLVIGGG-GREHALCYALKRSHSCDAVFCAPG-NAGISNS--------GDATCIPDLDVLDGDAVISFCRKW----- 146 (519)
Q Consensus 82 ~~~vliiG~g-~~~~~l~~~l~~~~g~~~v~~~~~-~~~~~~~--------~~~~~v~~~d~~d~~~l~~~~~~~----- 146 (519)
.++++|+|++ +....++..|.+. |++++.++.+ ....... .....+ ..|..|.+.+.+++++.
T Consensus 7 ~k~vlVTGasggiG~~~a~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~-~~D~~~~~~~~~~~~~~~~~~g 84 (258)
T 3afn_B 7 GKRVLITGSSQGIGLATARLFARA-GAKVGLHGRKAPANIDETIASMRADGGDAAFF-AADLATSEACQQLVDEFVAKFG 84 (258)
T ss_dssp TCEEEETTCSSHHHHHHHHHHHHT-TCEEEEEESSCCTTHHHHHHHHHHTTCEEEEE-ECCTTSHHHHHHHHHHHHHHHS
T ss_pred CCEEEEeCCCChHHHHHHHHHHHC-CCEEEEECCCchhhHHHHHHHHHhcCCceEEE-ECCCCCHHHHHHHHHHHHHHcC
Confidence 4689999865 4556788888887 8888777544 2111100 011122 56888877777666543
Q ss_pred CCcEEEE
Q 010065 147 SVGLVVV 153 (519)
Q Consensus 147 ~id~Vi~ 153 (519)
++|+||.
T Consensus 85 ~id~vi~ 91 (258)
T 3afn_B 85 GIDVLIN 91 (258)
T ss_dssp SCSEEEE
T ss_pred CCCEEEE
Confidence 7999987
No 210
>1fjh_A 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase; short chain dehydrogenase, SDR, xenobiotic, metyrapone, oligomerisation; 1.68A {Comamonas testosteroni} SCOP: c.2.1.2 PDB: 1fk8_A*
Probab=65.31 E-value=6.5 Score=36.26 Aligned_cols=64 Identities=14% Similarity=0.094 Sum_probs=42.6
Q ss_pred cEEEEEeCC-hhHHHHHHHHHhcCCCcEEEEecCCCCCcCCCCCccccCCCCCCHHHHHHHHHHc--CCcEEEE
Q 010065 83 VVVLVIGGG-GREHALCYALKRSHSCDAVFCAPGNAGISNSGDATCIPDLDVLDGDAVISFCRKW--SVGLVVV 153 (519)
Q Consensus 83 ~~vliiG~g-~~~~~l~~~l~~~~g~~~v~~~~~~~~~~~~~~~~~v~~~d~~d~~~l~~~~~~~--~id~Vi~ 153 (519)
++++|+|++ +....+++.|.+. |++++.++.+...... .+ ..|..+.+.+.+++++. ++|+++.
T Consensus 2 k~vlVTGas~gIG~~~a~~l~~~-G~~V~~~~r~~~~~~~-----~~-~~Dl~~~~~v~~~~~~~~~~id~lv~ 68 (257)
T 1fjh_A 2 SIIVISGCATGIGAATRKVLEAA-GHQIVGIDIRDAEVIA-----DL-STAEGRKQAIADVLAKCSKGMDGLVL 68 (257)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHT-TCEEEEEESSSSSEEC-----CT-TSHHHHHHHHHHHHTTCTTCCSEEEE
T ss_pred CEEEEeCCCCHHHHHHHHHHHHC-CCEEEEEeCCchhhcc-----cc-ccCCCCHHHHHHHHHHhCCCCCEEEE
Confidence 578999876 4556788888877 8887776543221110 13 45666677777777654 6899997
No 211
>1yo6_A Putative carbonyl reductase sniffer; tyrosine-dependent oxidoreductase (SDR family), structural genomics, PSI; 2.60A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=65.15 E-value=10 Score=34.52 Aligned_cols=70 Identities=17% Similarity=0.197 Sum_probs=43.1
Q ss_pred ccEEEEEeCC-hhHHHHHHHHHhcCC--CcEEEEecCCCCCcC-----CCCCccccCCCCCCHHHHHHHHHHc-------
Q 010065 82 RVVVLVIGGG-GREHALCYALKRSHS--CDAVFCAPGNAGISN-----SGDATCIPDLDVLDGDAVISFCRKW------- 146 (519)
Q Consensus 82 ~~~vliiG~g-~~~~~l~~~l~~~~g--~~~v~~~~~~~~~~~-----~~~~~~v~~~d~~d~~~l~~~~~~~------- 146 (519)
.++++|+|++ +....+++.|.+. | ++++.++.+...... ......+ ..|..|.+.+.+++++.
T Consensus 3 ~k~vlItGasggiG~~la~~l~~~-g~~~~V~~~~r~~~~~~~l~~~~~~~~~~~-~~D~~~~~~~~~~~~~~~~~~g~~ 80 (250)
T 1yo6_A 3 PGSVVVTGANRGIGLGLVQQLVKD-KNIRHIIATARDVEKATELKSIKDSRVHVL-PLTVTCDKSLDTFVSKVGEIVGSD 80 (250)
T ss_dssp CSEEEESSCSSHHHHHHHHHHHTC-TTCCEEEEEESSGGGCHHHHTCCCTTEEEE-ECCTTCHHHHHHHHHHHHHHHGGG
T ss_pred CCEEEEecCCchHHHHHHHHHHhc-CCCcEEEEEecCHHHHHHHHhccCCceEEE-EeecCCHHHHHHHHHHHHHhcCCC
Confidence 4679999876 3456788888877 7 777776543211110 0011222 56888877776665542
Q ss_pred CCcEEEE
Q 010065 147 SVGLVVV 153 (519)
Q Consensus 147 ~id~Vi~ 153 (519)
++|++|.
T Consensus 81 ~id~li~ 87 (250)
T 1yo6_A 81 GLSLLIN 87 (250)
T ss_dssp CCCEEEE
T ss_pred CCcEEEE
Confidence 7999997
No 212
>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A
Probab=65.01 E-value=6.6 Score=36.50 Aligned_cols=71 Identities=15% Similarity=0.170 Sum_probs=44.5
Q ss_pred CccEEEEEeCC-hhHHHHHHHHHhcCCCcEEEEecCCCCCc----CC-CCCccccCCCCCCHHHHHHHHHHc-----CCc
Q 010065 81 QRVVVLVIGGG-GREHALCYALKRSHSCDAVFCAPGNAGIS----NS-GDATCIPDLDVLDGDAVISFCRKW-----SVG 149 (519)
Q Consensus 81 ~~~~vliiG~g-~~~~~l~~~l~~~~g~~~v~~~~~~~~~~----~~-~~~~~v~~~d~~d~~~l~~~~~~~-----~id 149 (519)
+.++++|+|++ +....++..|.+. |.++++++.+..... .. .....+ ..|..|.+.+.+++++. ++|
T Consensus 7 ~~k~vlVTGas~gIG~~ia~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~-~~D~~~~~~v~~~~~~~~~~~g~id 84 (259)
T 4e6p_A 7 EGKSALITGSARGIGRAFAEAYVRE-GATVAIADIDIERARQAAAEIGPAAYAV-QMDVTRQDSIDAAIAATVEHAGGLD 84 (259)
T ss_dssp TTCEEEEETCSSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHCTTEEEE-ECCTTCHHHHHHHHHHHHHHSSSCC
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHhCCCceEE-EeeCCCHHHHHHHHHHHHHHcCCCC
Confidence 35789999976 4556788888887 898877654311100 00 011222 56888877776665543 799
Q ss_pred EEEE
Q 010065 150 LVVV 153 (519)
Q Consensus 150 ~Vi~ 153 (519)
.++.
T Consensus 85 ~lv~ 88 (259)
T 4e6p_A 85 ILVN 88 (259)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 9887
No 213
>3ay3_A NAD-dependent epimerase/dehydratase; glucuronic acid dehydrogeanse, oxidoreductase; 2.10A {Chromohalobacter salexigens}
Probab=64.98 E-value=6.9 Score=36.34 Aligned_cols=66 Identities=17% Similarity=0.211 Sum_probs=41.2
Q ss_pred cEEEEEeCC-hhHHHHHHHHHhcCCCcEEEEecCCCCCcCCCCCccccCCCCCCHHHHHHHHHHcCCcEEEE
Q 010065 83 VVVLVIGGG-GREHALCYALKRSHSCDAVFCAPGNAGISNSGDATCIPDLDVLDGDAVISFCRKWSVGLVVV 153 (519)
Q Consensus 83 ~~vliiG~g-~~~~~l~~~l~~~~g~~~v~~~~~~~~~~~~~~~~~v~~~d~~d~~~l~~~~~~~~id~Vi~ 153 (519)
++|||+|+. +....++..|.+. |++++.++....... ......+ ..|..|.+.+.++++ ++|.||.
T Consensus 3 ~~ilVtGatG~iG~~l~~~L~~~-g~~V~~~~r~~~~~~-~~~~~~~-~~Dl~d~~~~~~~~~--~~d~vi~ 69 (267)
T 3ay3_A 3 NRLLVTGAAGGVGSAIRPHLGTL-AHEVRLSDIVDLGAA-EAHEEIV-ACDLADAQAVHDLVK--DCDGIIH 69 (267)
T ss_dssp EEEEEESTTSHHHHHHGGGGGGT-EEEEEECCSSCCCCC-CTTEEEC-CCCTTCHHHHHHHHT--TCSEEEE
T ss_pred ceEEEECCCCHHHHHHHHHHHhC-CCEEEEEeCCCcccc-CCCccEE-EccCCCHHHHHHHHc--CCCEEEE
Confidence 589999975 4455667777665 777766643321111 1112223 578888888877765 5899987
No 214
>3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A*
Probab=64.85 E-value=7.9 Score=35.97 Aligned_cols=70 Identities=14% Similarity=0.189 Sum_probs=43.4
Q ss_pred ccEEEEEeCC-hhHHHHHHHHHhcCCCcEEEEecCCCCCcC---------CCCCccccCCCCCCHHHHHHHHHHc-----
Q 010065 82 RVVVLVIGGG-GREHALCYALKRSHSCDAVFCAPGNAGISN---------SGDATCIPDLDVLDGDAVISFCRKW----- 146 (519)
Q Consensus 82 ~~~vliiG~g-~~~~~l~~~l~~~~g~~~v~~~~~~~~~~~---------~~~~~~v~~~d~~d~~~l~~~~~~~----- 146 (519)
.++++|+|++ +....++..|.+. |++++.++.+...... -.....+ ..|..|.+.+.+++++.
T Consensus 7 ~k~vlVTGas~gIG~~ia~~l~~~-G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~-~~D~~~~~~~~~~~~~~~~~~g 84 (263)
T 3ai3_A 7 GKVAVITGSSSGIGLAIAEGFAKE-GAHIVLVARQVDRLHEAARSLKEKFGVRVLEV-AVDVATPEGVDAVVESVRSSFG 84 (263)
T ss_dssp TCEEEEESCSSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHHHHCCCEEEE-ECCTTSHHHHHHHHHHHHHHHS
T ss_pred CCEEEEECCCchHHHHHHHHHHHC-CCEEEEEcCCHHHHHHHHHHHHHhcCCceEEE-EcCCCCHHHHHHHHHHHHHHcC
Confidence 4689999976 4556788888887 8887776533110000 0011222 46888877776665542
Q ss_pred CCcEEEE
Q 010065 147 SVGLVVV 153 (519)
Q Consensus 147 ~id~Vi~ 153 (519)
++|+++.
T Consensus 85 ~id~lv~ 91 (263)
T 3ai3_A 85 GADILVN 91 (263)
T ss_dssp SCSEEEE
T ss_pred CCCEEEE
Confidence 7899887
No 215
>3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A*
Probab=64.76 E-value=7.5 Score=35.88 Aligned_cols=71 Identities=18% Similarity=0.264 Sum_probs=44.7
Q ss_pred CccEEEEEeCC-hhHHHHHHHHHhcCCCcEEEEecCCCCCcC-----CCCCccccCCCCCCHHHHHHHHHHc-----CCc
Q 010065 81 QRVVVLVIGGG-GREHALCYALKRSHSCDAVFCAPGNAGISN-----SGDATCIPDLDVLDGDAVISFCRKW-----SVG 149 (519)
Q Consensus 81 ~~~~vliiG~g-~~~~~l~~~l~~~~g~~~v~~~~~~~~~~~-----~~~~~~v~~~d~~d~~~l~~~~~~~-----~id 149 (519)
+.++++|+|++ +....+++.|.+. |.++++++.+...... ......+ ..|..|.+.+.+++++. ++|
T Consensus 5 ~gk~vlVTGas~gIG~a~a~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~-~~Dv~~~~~v~~~~~~~~~~~g~id 82 (247)
T 3rwb_A 5 AGKTALVTGAAQGIGKAIAARLAAD-GATVIVSDINAEGAKAAAASIGKKARAI-AADISDPGSVKALFAEIQALTGGID 82 (247)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHT-TCEEEEECSCHHHHHHHHHHHCTTEEEC-CCCTTCHHHHHHHHHHHHHHHSCCS
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHhCCceEEE-EcCCCCHHHHHHHHHHHHHHCCCCC
Confidence 35789999975 4566788998887 8888776533111000 0111223 57888877776666542 799
Q ss_pred EEEE
Q 010065 150 LVVV 153 (519)
Q Consensus 150 ~Vi~ 153 (519)
+++.
T Consensus 83 ~lv~ 86 (247)
T 3rwb_A 83 ILVN 86 (247)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 9997
No 216
>3dii_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3dij_A* 3ged_A 3geg_A*
Probab=64.70 E-value=10 Score=34.87 Aligned_cols=69 Identities=19% Similarity=0.256 Sum_probs=43.9
Q ss_pred cEEEEEeCC-hhHHHHHHHHHhcCCCcEEEEecCCCCC----cCCCCCccccCCCCCCHHHHHHHHHH-----cCCcEEE
Q 010065 83 VVVLVIGGG-GREHALCYALKRSHSCDAVFCAPGNAGI----SNSGDATCIPDLDVLDGDAVISFCRK-----WSVGLVV 152 (519)
Q Consensus 83 ~~vliiG~g-~~~~~l~~~l~~~~g~~~v~~~~~~~~~----~~~~~~~~v~~~d~~d~~~l~~~~~~-----~~id~Vi 152 (519)
++++|+|++ +....+++.|.+. |.+++.++.+.... ........+ ..|..|.+.+.+++++ .++|+++
T Consensus 3 k~vlVTGas~gIG~~ia~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~-~~Dv~~~~~v~~~~~~~~~~~g~id~lv 80 (247)
T 3dii_A 3 RGVIVTGGGHGIGKQICLDFLEA-GDKVCFIDIDEKRSADFAKERPNLFYF-HGDVADPLTLKKFVEYAMEKLQRIDVLV 80 (247)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHTTCTTEEEE-ECCTTSHHHHHHHHHHHHHHHSCCCEEE
T ss_pred CEEEEECCCCHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHhcccCCeE-EeeCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence 678999976 4566788888887 88887775431110 001111223 5688887777666654 2799999
Q ss_pred E
Q 010065 153 V 153 (519)
Q Consensus 153 ~ 153 (519)
.
T Consensus 81 ~ 81 (247)
T 3dii_A 81 N 81 (247)
T ss_dssp E
T ss_pred E
Confidence 7
No 217
>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}
Probab=64.56 E-value=6.7 Score=36.15 Aligned_cols=71 Identities=23% Similarity=0.330 Sum_probs=45.1
Q ss_pred CccEEEEEeCC-hhHHHHHHHHHhcCCCcEEEEecCCCCCcC--------CCCCccccCCCCCCHHHHHHHHHHc-----
Q 010065 81 QRVVVLVIGGG-GREHALCYALKRSHSCDAVFCAPGNAGISN--------SGDATCIPDLDVLDGDAVISFCRKW----- 146 (519)
Q Consensus 81 ~~~~vliiG~g-~~~~~l~~~l~~~~g~~~v~~~~~~~~~~~--------~~~~~~v~~~d~~d~~~l~~~~~~~----- 146 (519)
+.++++|+|++ +....+++.|.+. |.++++++.+...... ......+ ..|..|.+.+.+++++.
T Consensus 8 ~~k~vlITGas~giG~~~a~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~-~~D~~~~~~~~~~~~~~~~~~g 85 (253)
T 3qiv_A 8 ENKVGIVTGSGGGIGQAYAEALARE-GAAVVVADINAEAAEAVAKQIVADGGTAISV-AVDVSDPESAKAMADRTLAEFG 85 (253)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHHTTCEEEEE-ECCTTSHHHHHHHHHHHHHHHS
T ss_pred CCCEEEEECCCChHHHHHHHHHHHC-CCEEEEEcCCHHHHHHHHHHHHhcCCcEEEE-EccCCCHHHHHHHHHHHHHHcC
Confidence 45789999976 4566788999887 8988777543111000 0011122 56888877777666543
Q ss_pred CCcEEEE
Q 010065 147 SVGLVVV 153 (519)
Q Consensus 147 ~id~Vi~ 153 (519)
++|.++.
T Consensus 86 ~id~li~ 92 (253)
T 3qiv_A 86 GIDYLVN 92 (253)
T ss_dssp CCCEEEE
T ss_pred CCCEEEE
Confidence 7999997
No 218
>2ag5_A DHRS6, dehydrogenase/reductase (SDR family) member 6; protein-CO-factor complex, structural genomics, structural G consortium, SGC, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: c.2.1.2
Probab=64.37 E-value=7.8 Score=35.63 Aligned_cols=70 Identities=13% Similarity=0.183 Sum_probs=45.3
Q ss_pred ccEEEEEeCC-hhHHHHHHHHHhcCCCcEEEEecCCCCCcCC---CCCccccCCCCCCHHHHHHHHHHc-CCcEEEE
Q 010065 82 RVVVLVIGGG-GREHALCYALKRSHSCDAVFCAPGNAGISNS---GDATCIPDLDVLDGDAVISFCRKW-SVGLVVV 153 (519)
Q Consensus 82 ~~~vliiG~g-~~~~~l~~~l~~~~g~~~v~~~~~~~~~~~~---~~~~~v~~~d~~d~~~l~~~~~~~-~id~Vi~ 153 (519)
.++++|+|++ +....++..|.+. |.+++.++.+....... .....+ ..|..|.+.+.++.++. ++|.++.
T Consensus 6 ~k~vlVTGas~gIG~~ia~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~-~~D~~~~~~~~~~~~~~~~id~lv~ 80 (246)
T 2ag5_A 6 GKVIILTAAAQGIGQAAALAFARE-GAKVIATDINESKLQELEKYPGIQTR-VLDVTKKKQIDQFANEVERLDVLFN 80 (246)
T ss_dssp TCEEEESSTTSHHHHHHHHHHHHT-TCEEEEEESCHHHHGGGGGSTTEEEE-ECCTTCHHHHHHHHHHCSCCSEEEE
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHC-CCEEEEEECCHHHHHHHHhccCceEE-EeeCCCHHHHHHHHHHhCCCCEEEE
Confidence 4689999876 4556788888887 88887775431111100 011222 57888888887766665 6999997
No 219
>2q1s_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NADH complex, sugar binding protein; HET: NAI; 1.50A {Bordetella bronchiseptica} PDB: 2pzj_A* 2q1t_A* 2q1u_A*
Probab=64.36 E-value=11 Score=37.19 Aligned_cols=68 Identities=16% Similarity=0.119 Sum_probs=43.2
Q ss_pred ccEEEEEeCCh-hHHHHHHHHHhcCC-CcEEEEecCCCCC-cCC---CCCccccCCCCCCHHHHHHHHHHcCCcEEEE
Q 010065 82 RVVVLVIGGGG-REHALCYALKRSHS-CDAVFCAPGNAGI-SNS---GDATCIPDLDVLDGDAVISFCRKWSVGLVVV 153 (519)
Q Consensus 82 ~~~vliiG~g~-~~~~l~~~l~~~~g-~~~v~~~~~~~~~-~~~---~~~~~v~~~d~~d~~~l~~~~~~~~id~Vi~ 153 (519)
.|+|||+|+.| ....++..|.+. | ++++.++...... ... .....+ ..|..|.+.+.++++ ++|.||-
T Consensus 32 ~~~ilVtGatG~iG~~l~~~L~~~-g~~~V~~~~r~~~~~~~~l~~~~~v~~~-~~Dl~d~~~l~~~~~--~~d~Vih 105 (377)
T 2q1s_A 32 NTNVMVVGGAGFVGSNLVKRLLEL-GVNQVHVVDNLLSAEKINVPDHPAVRFS-ETSITDDALLASLQD--EYDYVFH 105 (377)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHT-TCSEEEEECCCTTCCGGGSCCCTTEEEE-CSCTTCHHHHHHCCS--CCSEEEE
T ss_pred CCEEEEECCccHHHHHHHHHHHHc-CCceEEEEECCCCCchhhccCCCceEEE-ECCCCCHHHHHHHhh--CCCEEEE
Confidence 47899999754 556788888877 8 8887775432211 111 111223 567788777766554 7899997
No 220
>1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2
Probab=63.82 E-value=8.2 Score=35.96 Aligned_cols=71 Identities=20% Similarity=0.255 Sum_probs=43.9
Q ss_pred CccEEEEEeCC-hhHHHHHHHHHhcCCCcEEEEecCCCCCcC----------CCCCccccCCCCCCHHHHHHHHHHc---
Q 010065 81 QRVVVLVIGGG-GREHALCYALKRSHSCDAVFCAPGNAGISN----------SGDATCIPDLDVLDGDAVISFCRKW--- 146 (519)
Q Consensus 81 ~~~~vliiG~g-~~~~~l~~~l~~~~g~~~v~~~~~~~~~~~----------~~~~~~v~~~d~~d~~~l~~~~~~~--- 146 (519)
+.++++|+|++ +....++..|.+. |++++.++.+...... ......+ ..|..|.+.+.+++++.
T Consensus 12 ~~k~vlVTGas~gIG~~ia~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~-~~D~~~~~~v~~~~~~~~~~ 89 (267)
T 1iy8_A 12 TDRVVLITGGGSGLGRATAVRLAAE-GAKLSLVDVSSEGLEASKAAVLETAPDAEVLTT-VADVSDEAQVEAYVTATTER 89 (267)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHHHCTTCCEEEE-ECCTTSHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHHHhhcCCceEEEE-EccCCCHHHHHHHHHHHHHH
Confidence 35789999966 4556788888887 8888776543111000 0011122 46888877776665542
Q ss_pred --CCcEEEE
Q 010065 147 --SVGLVVV 153 (519)
Q Consensus 147 --~id~Vi~ 153 (519)
++|+++.
T Consensus 90 ~g~id~lv~ 98 (267)
T 1iy8_A 90 FGRIDGFFN 98 (267)
T ss_dssp HSCCSEEEE
T ss_pred cCCCCEEEE
Confidence 6899887
No 221
>3s2u_A UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape pyrophosphoryl-undecaprenol N-acetylglucosamine...; N-acetylglucosaminyl transferase; HET: UD1; 2.23A {Pseudomonas aeruginosa}
Probab=63.80 E-value=23 Score=34.75 Aligned_cols=32 Identities=16% Similarity=0.237 Sum_probs=23.3
Q ss_pred ccEEEEEeCChh-----HHHHHHHHHhcCCCcEEEEec
Q 010065 82 RVVVLVIGGGGR-----EHALCYALKRSHSCDAVFCAP 114 (519)
Q Consensus 82 ~~~vliiG~g~~-----~~~l~~~l~~~~g~~~v~~~~ 114 (519)
+++|+|.|+|.. ..+++..|++. |+++.++..
T Consensus 2 ~~~i~i~~GGTgGHi~palala~~L~~~-g~~V~~vg~ 38 (365)
T 3s2u_A 2 KGNVLIMAGGTGGHVFPALACAREFQAR-GYAVHWLGT 38 (365)
T ss_dssp -CEEEEECCSSHHHHHHHHHHHHHHHHT-TCEEEEEEC
T ss_pred CCcEEEEcCCCHHHHHHHHHHHHHHHhC-CCEEEEEEC
Confidence 468999988742 35678888877 999888753
No 222
>3pdi_A Nitrogenase MOFE cofactor biosynthesis protein NI; nitrogenase cofactor maturation, NIFB, nifdk, NIFH; HET: CZL; 2.40A {Azotobacter vinelandii}
Probab=63.66 E-value=16 Score=37.55 Aligned_cols=85 Identities=15% Similarity=0.191 Sum_probs=54.9
Q ss_pred ccEEEEEeCChhHHHHHHHHHhcCCCcEEEEecCCCCCc-------CCCCCccccCCCCCCHHHHHHHHHHcCCcEEEEC
Q 010065 82 RVVVLVIGGGGREHALCYALKRSHSCDAVFCAPGNAGIS-------NSGDATCIPDLDVLDGDAVISFCRKWSVGLVVVG 154 (519)
Q Consensus 82 ~~~vliiG~g~~~~~l~~~l~~~~g~~~v~~~~~~~~~~-------~~~~~~~v~~~d~~d~~~l~~~~~~~~id~Vi~g 154 (519)
.++|.|.|.+.....++..|.+. |.+++.+...+.... ... ...+ .++..|...+.+++++.++|+++.+
T Consensus 332 GKrv~i~~~~~~~~~l~~~L~El-Gmevv~~gt~~~~~~d~~~~~~~l~-~~~~-i~~d~d~~el~~~i~~~~pDL~ig~ 408 (483)
T 3pdi_A 332 GKRVLLYTGGVKSWSVVSALQDL-GMKVVATGTKKSTEEDKARIRELMG-DDVK-MLDEGNARVLLKTVDEYQADILIAG 408 (483)
T ss_dssp TCEEEEECSSSCHHHHHHHHHHH-TCEEEEECBSSSCHHHHHHHHHHSC-SSCC-BCCSCSHHHHHHHHHHTTCSEEECC
T ss_pred CCEEEEECCCchHHHHHHHHHHC-CCEEEEEecCCCCHHHHHHHHHhcC-CCCE-EEeCCCHHHHHHHHHhcCCCEEEEC
Confidence 47999999887777788888654 998877632211100 011 1111 3455578899999999999999865
Q ss_pred CChhhHHHHHHHHHHCCCCee
Q 010065 155 PEAPLVSGLANKLVKAGIPTF 175 (519)
Q Consensus 155 ~E~~~~~~~a~~le~~gip~~ 175 (519)
.-.. .+ .+++|+|++
T Consensus 409 ~~~~---~~---a~k~gIP~~ 423 (483)
T 3pdi_A 409 GRNM---YT---ALKGRVPFL 423 (483)
T ss_dssp GGGH---HH---HHHTTCCBC
T ss_pred Cchh---HH---HHHcCCCEE
Confidence 3222 12 567899975
No 223
>3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti}
Probab=63.43 E-value=11 Score=35.41 Aligned_cols=70 Identities=14% Similarity=0.195 Sum_probs=44.0
Q ss_pred ccEEEEEeCC-hhHHHHHHHHHhcCCCcEEEEecCCCCC-c-------C--CCCCccccCCCCCCHHHHHHHHHHc----
Q 010065 82 RVVVLVIGGG-GREHALCYALKRSHSCDAVFCAPGNAGI-S-------N--SGDATCIPDLDVLDGDAVISFCRKW---- 146 (519)
Q Consensus 82 ~~~vliiG~g-~~~~~l~~~l~~~~g~~~v~~~~~~~~~-~-------~--~~~~~~v~~~d~~d~~~l~~~~~~~---- 146 (519)
.++++|+|++ +....++..|.+. |.++++++..+... . . ......+ ..|..|.+.+.+++++.
T Consensus 25 ~k~~lVTGas~GIG~~ia~~la~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~-~~Dv~d~~~v~~~~~~~~~~~ 102 (281)
T 3v2h_A 25 TKTAVITGSTSGIGLAIARTLAKA-GANIVLNGFGAPDEIRTVTDEVAGLSSGTVLHH-PADMTKPSEIADMMAMVADRF 102 (281)
T ss_dssp TCEEEEETCSSHHHHHHHHHHHHT-TCEEEEECCCCHHHHHHHHHHHHTTCSSCEEEE-CCCTTCHHHHHHHHHHHHHHT
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHC-CCEEEEEeCCChHHHHHHHHHHhhccCCcEEEE-eCCCCCHHHHHHHHHHHHHHC
Confidence 4689999966 4566788899887 88887765422110 0 0 0111222 56888877777666543
Q ss_pred -CCcEEEE
Q 010065 147 -SVGLVVV 153 (519)
Q Consensus 147 -~id~Vi~ 153 (519)
++|+++.
T Consensus 103 g~iD~lv~ 110 (281)
T 3v2h_A 103 GGADILVN 110 (281)
T ss_dssp SSCSEEEE
T ss_pred CCCCEEEE
Confidence 7999987
No 224
>2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A
Probab=63.41 E-value=11 Score=35.55 Aligned_cols=69 Identities=12% Similarity=0.058 Sum_probs=43.7
Q ss_pred ccEEEEEeCC-hhHHHHHHHHHhcCC-CcEEEEecCCCCCc--C--CCCCccccCCCCCCHHHHHHHHHHcCCcEEEEC
Q 010065 82 RVVVLVIGGG-GREHALCYALKRSHS-CDAVFCAPGNAGIS--N--SGDATCIPDLDVLDGDAVISFCRKWSVGLVVVG 154 (519)
Q Consensus 82 ~~~vliiG~g-~~~~~l~~~l~~~~g-~~~v~~~~~~~~~~--~--~~~~~~v~~~d~~d~~~l~~~~~~~~id~Vi~g 154 (519)
+++|+|+|+. .....++..|.+. | ++++.++.+..... . ......+ ..|..|.+.+.+.++ ++|.||..
T Consensus 5 ~~~ilVtGatG~iG~~l~~~L~~~-g~~~V~~~~R~~~~~~~~~l~~~~~~~~-~~D~~d~~~l~~~~~--~~d~vi~~ 79 (299)
T 2wm3_A 5 KKLVVVFGGTGAQGGSVARTLLED-GTFKVRVVTRNPRKKAAKELRLQGAEVV-QGDQDDQVIMELALN--GAYATFIV 79 (299)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHH-CSSEEEEEESCTTSHHHHHHHHTTCEEE-ECCTTCHHHHHHHHT--TCSEEEEC
T ss_pred CCEEEEECCCchHHHHHHHHHHhc-CCceEEEEEcCCCCHHHHHHHHCCCEEE-EecCCCHHHHHHHHh--cCCEEEEe
Confidence 5789999985 4556778888876 6 77777654321110 0 0112223 568888888877664 58989873
No 225
>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} SCOP: c.2.1.0 PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A
Probab=63.33 E-value=10 Score=35.08 Aligned_cols=72 Identities=11% Similarity=0.183 Sum_probs=42.6
Q ss_pred CCccEEEEEeCC-hhHHHHHHHHHhcCCCcEEEEecCCCCCcCC---------CCCccccCCCC--CCHHHHHHHHHHc-
Q 010065 80 GQRVVVLVIGGG-GREHALCYALKRSHSCDAVFCAPGNAGISNS---------GDATCIPDLDV--LDGDAVISFCRKW- 146 (519)
Q Consensus 80 ~~~~~vliiG~g-~~~~~l~~~l~~~~g~~~v~~~~~~~~~~~~---------~~~~~v~~~d~--~d~~~l~~~~~~~- 146 (519)
.+.++++|+|++ +....+++.|.+. |.++++++.+....... .....+ ..|. .|.+.+.+++++.
T Consensus 10 l~~k~vlVTGas~gIG~aia~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~-~~D~~~~~~~~~~~~~~~~~ 87 (252)
T 3f1l_A 10 LNDRIILVTGASDGIGREAAMTYARY-GATVILLGRNEEKLRQVASHINEETGRQPQWF-ILDLLTCTSENCQQLAQRIA 87 (252)
T ss_dssp TTTCEEEEESTTSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHHHHSCCCEEE-ECCTTTCCHHHHHHHHHHHH
T ss_pred cCCCEEEEeCCCChHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHHHhhcCCCceEE-EEecccCCHHHHHHHHHHHH
Confidence 356789999976 4556788888877 89887775431110000 011122 3455 6666655554432
Q ss_pred ----CCcEEEE
Q 010065 147 ----SVGLVVV 153 (519)
Q Consensus 147 ----~id~Vi~ 153 (519)
++|+++.
T Consensus 88 ~~~g~id~lv~ 98 (252)
T 3f1l_A 88 VNYPRLDGVLH 98 (252)
T ss_dssp HHCSCCSEEEE
T ss_pred HhCCCCCEEEE
Confidence 6899887
No 226
>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}
Probab=63.24 E-value=8.2 Score=36.37 Aligned_cols=71 Identities=21% Similarity=0.224 Sum_probs=42.9
Q ss_pred CccEEEEEeCC-hhHHHHHHHHHhcCCCcEEEEecCCCCCc-------C-CCCCccccCCCCCCHHHHHHHHHHc-----
Q 010065 81 QRVVVLVIGGG-GREHALCYALKRSHSCDAVFCAPGNAGIS-------N-SGDATCIPDLDVLDGDAVISFCRKW----- 146 (519)
Q Consensus 81 ~~~~vliiG~g-~~~~~l~~~l~~~~g~~~v~~~~~~~~~~-------~-~~~~~~v~~~d~~d~~~l~~~~~~~----- 146 (519)
..+++||+|++ +....++..|.+. |.+++.++.+..... . ......+ ..|..|.+.+.+++++.
T Consensus 23 ~~k~~lVTGas~GIG~aia~~la~~-G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~-~~Dv~d~~~v~~~~~~~~~~~g 100 (279)
T 3sju_A 23 RPQTAFVTGVSSGIGLAVARTLAAR-GIAVYGCARDAKNVSAAVDGLRAAGHDVDGS-SCDVTSTDEVHAAVAAAVERFG 100 (279)
T ss_dssp --CEEEEESTTSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHTTTCCEEEE-ECCTTCHHHHHHHHHHHHHHHC
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHHHhcCCcEEEE-ECCCCCHHHHHHHHHHHHHHcC
Confidence 34688999866 4556788888887 898877654311000 0 0011222 56888877766665542
Q ss_pred CCcEEEE
Q 010065 147 SVGLVVV 153 (519)
Q Consensus 147 ~id~Vi~ 153 (519)
++|+++.
T Consensus 101 ~id~lv~ 107 (279)
T 3sju_A 101 PIGILVN 107 (279)
T ss_dssp SCCEEEE
T ss_pred CCcEEEE
Confidence 7899887
No 227
>2ggs_A 273AA long hypothetical DTDP-4-dehydrorhamnose reductase; alpha, beta, oxidoreductase; HET: NDP; 1.70A {Sulfolobus tokodaii}
Probab=63.24 E-value=20 Score=33.06 Aligned_cols=62 Identities=16% Similarity=0.148 Sum_probs=43.4
Q ss_pred cEEEEEeCC-hhHHHHHHHHHhcCCCcEEEEecCCCCCcCCCCCccccCCCCCCHHHHHHHHHHcCCcEEEE
Q 010065 83 VVVLVIGGG-GREHALCYALKRSHSCDAVFCAPGNAGISNSGDATCIPDLDVLDGDAVISFCRKWSVGLVVV 153 (519)
Q Consensus 83 ~~vliiG~g-~~~~~l~~~l~~~~g~~~v~~~~~~~~~~~~~~~~~v~~~d~~d~~~l~~~~~~~~id~Vi~ 153 (519)
|+|+|+|+. +....++..|. . |++++.++..... . . . + ..|..|.+.+.++++..++|.||.
T Consensus 1 m~ilVtGatG~iG~~l~~~L~-~-g~~V~~~~r~~~~-~--~--~-~-~~Dl~~~~~~~~~~~~~~~d~vi~ 63 (273)
T 2ggs_A 1 MRTLITGASGQLGIELSRLLS-E-RHEVIKVYNSSEI-Q--G--G-Y-KLDLTDFPRLEDFIIKKRPDVIIN 63 (273)
T ss_dssp CCEEEETTTSHHHHHHHHHHT-T-TSCEEEEESSSCC-T--T--C-E-ECCTTSHHHHHHHHHHHCCSEEEE
T ss_pred CEEEEECCCChhHHHHHHHHh-c-CCeEEEecCCCcC-C--C--C-c-eeccCCHHHHHHHHHhcCCCEEEE
Confidence 479999965 45567788887 4 7887776543211 1 1 1 3 568888888888887778999997
No 228
>3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis}
Probab=63.19 E-value=7.6 Score=36.76 Aligned_cols=71 Identities=15% Similarity=0.237 Sum_probs=47.5
Q ss_pred CccEEEEEeCC-hhHHHHHHHHHhcCCCcEEEEecCCCCCc----CC-CCCccccCCCCCCHHHHHHHHHHc-CCcEEEE
Q 010065 81 QRVVVLVIGGG-GREHALCYALKRSHSCDAVFCAPGNAGIS----NS-GDATCIPDLDVLDGDAVISFCRKW-SVGLVVV 153 (519)
Q Consensus 81 ~~~~vliiG~g-~~~~~l~~~l~~~~g~~~v~~~~~~~~~~----~~-~~~~~v~~~d~~d~~~l~~~~~~~-~id~Vi~ 153 (519)
..++++|+|++ +....+++.|.+. |.++++++.+..... .. .....+ ..|..|.+.+.+++++. ++|+++.
T Consensus 15 ~gk~vlVTGas~gIG~~~a~~L~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~-~~Dl~d~~~v~~~~~~~~~iD~lv~ 92 (291)
T 3rd5_A 15 AQRTVVITGANSGLGAVTARELARR-GATVIMAVRDTRKGEAAARTMAGQVEVR-ELDLQDLSSVRRFADGVSGADVLIN 92 (291)
T ss_dssp TTCEEEEECCSSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHTTSSSEEEEE-ECCTTCHHHHHHHHHTCCCEEEEEE
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHC-CCEEEEEECCHHHHHHHHHHhcCCeeEE-EcCCCCHHHHHHHHHhcCCCCEEEE
Confidence 34789999976 4566788999887 888877754311100 00 011222 57888999998888875 7898887
No 229
>3mz0_A Inositol 2-dehydrogenase/D-chiro-inositol 3-dehyd; MYO-inositol dehydrogenase, bsidh, oxidoreductase; HET: MSE PGE; 1.54A {Bacillus subtilis} PDB: 3nt2_A* 3nt4_A* 3nt5_A* 3nto_A* 3ntq_A* 3ntr_A*
Probab=63.10 E-value=2.9 Score=41.01 Aligned_cols=141 Identities=16% Similarity=0.090 Sum_probs=71.9
Q ss_pred ccEEEEEeCChhHHHHHHHHH-hcCCCcEEEEecCCCCCcCCCCCccccCC---CCCCHHHHHHHHHHcCCcEEEECCCh
Q 010065 82 RVVVLVIGGGGREHALCYALK-RSHSCDAVFCAPGNAGISNSGDATCIPDL---DVLDGDAVISFCRKWSVGLVVVGPEA 157 (519)
Q Consensus 82 ~~~vliiG~g~~~~~l~~~l~-~~~g~~~v~~~~~~~~~~~~~~~~~v~~~---d~~d~~~l~~~~~~~~id~Vi~g~E~ 157 (519)
+++|.|||.|......+..+. +..+++.+.+.+.++..... ....+ .+ -..+.+++ +...++|+|+...-.
T Consensus 2 ~~rigiIG~G~~g~~~~~~l~~~~~~~~l~av~d~~~~~~~~-~~~~~-g~~~~~~~~~~~l---l~~~~~D~V~i~tp~ 76 (344)
T 3mz0_A 2 SLRIGVIGTGAIGKEHINRITNKLSGAEIVAVTDVNQEAAQK-VVEQY-QLNATVYPNDDSL---LADENVDAVLVTSWG 76 (344)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTCSSEEEEEEECSSHHHHHH-HHHHT-TCCCEEESSHHHH---HHCTTCCEEEECSCG
T ss_pred eEEEEEECccHHHHHHHHHHHhhCCCcEEEEEEcCCHHHHHH-HHHHh-CCCCeeeCCHHHH---hcCCCCCEEEECCCc
Confidence 468999999965555677777 44577776554332211000 00001 10 12344444 445679999986544
Q ss_pred hhHHHHHHHHHHCCCCeeCCcHHHHHHhcCHHHHHHHHHHcCCCC--CCeeecC--CHHHHHHHHHH--hCCCEEEE
Q 010065 158 PLVSGLANKLVKAGIPTFGPSSEAAALEGSKNFMKNLCDKYGIPT--AKYKTFT--DPNAAKQYIQE--EGAPIVVK 228 (519)
Q Consensus 158 ~~~~~~a~~le~~gip~~g~~~~~~~~~~dK~~~k~~l~~~Gi~~--p~~~~v~--~~~~~~~~~~~--~g~P~VvK 228 (519)
..-..++..+-+.|.+++.-.|-+... .+=..+.+++++.|+.. ..+..-. ....+.+.+++ +|-+..+.
T Consensus 77 ~~h~~~~~~al~~Gk~vl~EKP~a~~~-~e~~~l~~~a~~~g~~~~~v~~~~r~~p~~~~~k~~i~~g~iG~i~~v~ 152 (344)
T 3mz0_A 77 PAHESSVLKAIKAQKYVFCEKPLATTA-EGCMRIVEEEIKVGKRLVQVGFMRRYDSGYVQLKEALDNHVIGEPLMIH 152 (344)
T ss_dssp GGHHHHHHHHHHTTCEEEECSCSCSSH-HHHHHHHHHHHHHSSCCEEECCGGGGSHHHHHHHHHHHTTTTSSEEEEE
T ss_pred hhHHHHHHHHHHCCCcEEEcCCCCCCH-HHHHHHHHHHHHHCCEEEEEecccccCHHHHHHHHHHHcCCCCCcEEEE
Confidence 443345555667788776333322211 11123556677788754 2222111 22345555543 66665554
No 230
>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti}
Probab=63.02 E-value=5.5 Score=37.39 Aligned_cols=71 Identities=24% Similarity=0.322 Sum_probs=43.8
Q ss_pred CccEEEEEeCC-hhHHHHHHHHHhcCCCcEEEEecCCCCCcCC--------CCCccccCCCCCCHHHHHHHHHHc-----
Q 010065 81 QRVVVLVIGGG-GREHALCYALKRSHSCDAVFCAPGNAGISNS--------GDATCIPDLDVLDGDAVISFCRKW----- 146 (519)
Q Consensus 81 ~~~~vliiG~g-~~~~~l~~~l~~~~g~~~v~~~~~~~~~~~~--------~~~~~v~~~d~~d~~~l~~~~~~~----- 146 (519)
..++++|+|++ +....++..|.+. |.++++++.+....... .....+ ..|..|.+.+.+++++.
T Consensus 3 ~~k~~lVTGas~GIG~aia~~la~~-G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~-~~Dv~d~~~v~~~~~~~~~~~g 80 (264)
T 3tfo_A 3 MDKVILITGASGGIGEGIARELGVA-GAKILLGARRQARIEAIATEIRDAGGTALAQ-VLDVTDRHSVAAFAQAAVDTWG 80 (264)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHT-TCEEEEEESSHHHHHHHHHHHHHTTCEEEEE-ECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCCEEEEeCCccHHHHHHHHHHHHC-CCEEEEEECCHHHHHHHHHHHHhcCCcEEEE-EcCCCCHHHHHHHHHHHHHHcC
Confidence 34688999876 4567788888877 89887775431110000 011112 46888877766665542
Q ss_pred CCcEEEE
Q 010065 147 SVGLVVV 153 (519)
Q Consensus 147 ~id~Vi~ 153 (519)
++|+++.
T Consensus 81 ~iD~lVn 87 (264)
T 3tfo_A 81 RIDVLVN 87 (264)
T ss_dssp CCCEEEE
T ss_pred CCCEEEE
Confidence 7999887
No 231
>2d1y_A Hypothetical protein TT0321; strucrtural genomics, thermus thermophilus HB8, structural genomics, NPPSFA; HET: NAD; 1.65A {Thermus thermophilus} SCOP: c.2.1.2
Probab=63.01 E-value=8.3 Score=35.72 Aligned_cols=69 Identities=23% Similarity=0.354 Sum_probs=43.8
Q ss_pred ccEEEEEeCC-hhHHHHHHHHHhcCCCcEEEEecCCCCCcCCC-C--CccccCCCCCCHHHHHHHHHHc-----CCcEEE
Q 010065 82 RVVVLVIGGG-GREHALCYALKRSHSCDAVFCAPGNAGISNSG-D--ATCIPDLDVLDGDAVISFCRKW-----SVGLVV 152 (519)
Q Consensus 82 ~~~vliiG~g-~~~~~l~~~l~~~~g~~~v~~~~~~~~~~~~~-~--~~~v~~~d~~d~~~l~~~~~~~-----~id~Vi 152 (519)
.++++|+|++ +....++..|.+. |++++.++.+... .... . ...+ ..|..|.+.+.+++++. ++|.++
T Consensus 6 ~k~vlVTGas~gIG~~ia~~l~~~-G~~V~~~~r~~~~-~~~~~~~~~~~~-~~D~~~~~~~~~~~~~~~~~~g~iD~lv 82 (256)
T 2d1y_A 6 GKGVLVTGGARGIGRAIAQAFARE-GALVALCDLRPEG-KEVAEAIGGAFF-QVDLEDERERVRFVEEAAYALGRVDVLV 82 (256)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHT-TCEEEEEESSTTH-HHHHHHHTCEEE-ECCTTCHHHHHHHHHHHHHHHSCCCEEE
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHC-CCEEEEEeCChhH-HHHHHHhhCCEE-EeeCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence 4689999976 4556788888887 8887776543221 1000 0 0223 56888877766665542 799998
Q ss_pred E
Q 010065 153 V 153 (519)
Q Consensus 153 ~ 153 (519)
.
T Consensus 83 ~ 83 (256)
T 2d1y_A 83 N 83 (256)
T ss_dssp E
T ss_pred E
Confidence 7
No 232
>1ydw_A AX110P-like protein; structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG, AT4G09670; 2.49A {Arabidopsis thaliana} SCOP: c.2.1.3 d.81.1.5 PDB: 2q4e_A
Probab=63.00 E-value=2.6 Score=41.61 Aligned_cols=116 Identities=12% Similarity=0.062 Sum_probs=59.4
Q ss_pred CccEEEEEeCChhHHHHHHHHHhcCCCcEEEEecCCCCCcCCCCCccccCC-----CCCCHHHHHHHHHHcCCcEEEECC
Q 010065 81 QRVVVLVIGGGGREHALCYALKRSHSCDAVFCAPGNAGISNSGDATCIPDL-----DVLDGDAVISFCRKWSVGLVVVGP 155 (519)
Q Consensus 81 ~~~~vliiG~g~~~~~l~~~l~~~~g~~~v~~~~~~~~~~~~~~~~~v~~~-----d~~d~~~l~~~~~~~~id~Vi~g~ 155 (519)
++++|.|||.|......+..+.+..+++.+.+.+.+...... ..... .+ -..+.+++ +...++|+|+...
T Consensus 5 ~~~~vgiiG~G~ig~~~~~~l~~~~~~~lv~v~d~~~~~~~~-~a~~~-~~~~~~~~~~~~~~l---l~~~~~D~V~i~t 79 (362)
T 1ydw_A 5 TQIRIGVMGCADIARKVSRAIHLAPNATISGVASRSLEKAKA-FATAN-NYPESTKIHGSYESL---LEDPEIDALYVPL 79 (362)
T ss_dssp -CEEEEEESCCTTHHHHHHHHHHCTTEEEEEEECSSHHHHHH-HHHHT-TCCTTCEEESSHHHH---HHCTTCCEEEECC
T ss_pred CceEEEEECchHHHHHHHHHHhhCCCcEEEEEEcCCHHHHHH-HHHHh-CCCCCCeeeCCHHHH---hcCCCCCEEEEcC
Confidence 468999999996555566777766577766554332211000 00000 00 11344444 4455799999865
Q ss_pred ChhhHHHHHHHHHHCCCCeeCCcHHHHHHhcCHHHHHHHHHHcCCCC
Q 010065 156 EAPLVSGLANKLVKAGIPTFGPSSEAAALEGSKNFMKNLCDKYGIPT 202 (519)
Q Consensus 156 E~~~~~~~a~~le~~gip~~g~~~~~~~~~~dK~~~k~~l~~~Gi~~ 202 (519)
-...-..++..+-+.|.+++.-.|-+... .+=..+.+.+++.|+..
T Consensus 80 p~~~h~~~~~~al~aGk~V~~EKP~a~~~-~e~~~l~~~a~~~g~~~ 125 (362)
T 1ydw_A 80 PTSLHVEWAIKAAEKGKHILLEKPVAMNV-TEFDKIVDACEANGVQI 125 (362)
T ss_dssp CGGGHHHHHHHHHTTTCEEEECSSCSSSH-HHHHHHHHHHHTTTCCE
T ss_pred ChHHHHHHHHHHHHCCCeEEEecCCcCCH-HHHHHHHHHHHHcCCEE
Confidence 44443344555556788776333322111 11233445566666643
No 233
>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans}
Probab=62.78 E-value=9 Score=35.28 Aligned_cols=71 Identities=21% Similarity=0.285 Sum_probs=44.3
Q ss_pred CccEEEEEeCC-hhHHHHHHHHHhcCCCcEEEEecCCCCCcC--------CCCCccccCCCCCCHHHHHHHHHH-----c
Q 010065 81 QRVVVLVIGGG-GREHALCYALKRSHSCDAVFCAPGNAGISN--------SGDATCIPDLDVLDGDAVISFCRK-----W 146 (519)
Q Consensus 81 ~~~~vliiG~g-~~~~~l~~~l~~~~g~~~v~~~~~~~~~~~--------~~~~~~v~~~d~~d~~~l~~~~~~-----~ 146 (519)
+.++++|+|++ +....++..|.+. |++++.++.+...... ......+ ..|..|.+.+.+++++ .
T Consensus 12 ~~k~vlItGasggiG~~la~~l~~~-G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~-~~D~~~~~~~~~~~~~~~~~~~ 89 (260)
T 3awd_A 12 DNRVAIVTGGAQNIGLACVTALAEA-GARVIIADLDEAMATKAVEDLRMEGHDVSSV-VMDVTNTESVQNAVRSVHEQEG 89 (260)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHHTTCCEEEE-ECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHHHhcCCceEEE-EecCCCHHHHHHHHHHHHHHcC
Confidence 35789999976 4556788888877 8888777543110000 0011223 5688887777666553 2
Q ss_pred CCcEEEE
Q 010065 147 SVGLVVV 153 (519)
Q Consensus 147 ~id~Vi~ 153 (519)
++|.+|.
T Consensus 90 ~id~vi~ 96 (260)
T 3awd_A 90 RVDILVA 96 (260)
T ss_dssp CCCEEEE
T ss_pred CCCEEEE
Confidence 7999987
No 234
>1ff9_A Saccharopine reductase; lysine biosynthesis, alpha-aminoadipate pathway, dehydrogenase, oxidoreductase; 2.00A {Magnaporthe grisea} SCOP: c.2.1.3 d.81.1.2 PDB: 1e5l_A* 1e5q_A
Probab=62.68 E-value=25 Score=35.82 Aligned_cols=113 Identities=16% Similarity=0.093 Sum_probs=59.4
Q ss_pred ccEEEEEeCChhHHHHHHHHHhcCCCcEEEEecCCCCCcCCC----CCccccCCCCCCHHHHHHHHHHcCCcEEEECCCh
Q 010065 82 RVVVLVIGGGGREHALCYALKRSHSCDAVFCAPGNAGISNSG----DATCIPDLDVLDGDAVISFCRKWSVGLVVVGPEA 157 (519)
Q Consensus 82 ~~~vliiG~g~~~~~l~~~l~~~~g~~~v~~~~~~~~~~~~~----~~~~v~~~d~~d~~~l~~~~~~~~id~Vi~g~E~ 157 (519)
.++|+|+|+|+....++..|.+. |.++++++.+........ ....+ ..|..|.+.+.++++ ++|+|+...-.
T Consensus 3 ~k~VlViGaG~iG~~ia~~L~~~-G~~V~v~~R~~~~a~~la~~~~~~~~~-~~Dv~d~~~l~~~l~--~~DvVIn~a~~ 78 (450)
T 1ff9_A 3 TKSVLMLGSGFVTRPTLDVLTDS-GIKVTVACRTLESAKKLSAGVQHSTPI-SLDVNDDAALDAEVA--KHDLVISLIPY 78 (450)
T ss_dssp CCEEEEECCSTTHHHHHHHHHTT-TCEEEEEESSHHHHHHTTTTCTTEEEE-ECCTTCHHHHHHHHT--TSSEEEECCC-
T ss_pred CCEEEEECCCHHHHHHHHHHHhC-cCEEEEEECCHHHHHHHHHhcCCceEE-EeecCCHHHHHHHHc--CCcEEEECCcc
Confidence 46899999987777788888865 887665543311111110 01112 357777777766664 78999983211
Q ss_pred hhHHHHHHHHHHCCCCeeCCcHHHHHHhcCHHHHHHHHHHcCCCC
Q 010065 158 PLVSGLANKLVKAGIPTFGPSSEAAALEGSKNFMKNLCDKYGIPT 202 (519)
Q Consensus 158 ~~~~~~a~~le~~gip~~g~~~~~~~~~~dK~~~k~~l~~~Gi~~ 202 (519)
.....+...+-..|..++...... .....+.+.++++|+..
T Consensus 79 ~~~~~i~~a~l~~g~~vvd~~~~~----~~~~~l~~aA~~aGv~~ 119 (450)
T 1ff9_A 79 TFHATVIKSAIRQKKHVVTTSYVS----PAMMELDQAAKDAGITV 119 (450)
T ss_dssp -CHHHHHHHHHHHTCEEEESSCCC----HHHHHTHHHHHHTTCEE
T ss_pred ccchHHHHHHHhCCCeEEEeeccc----HHHHHHHHHHHHCCCeE
Confidence 111122222334466665321100 00123445677788764
No 235
>2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum}
Probab=62.65 E-value=14 Score=33.61 Aligned_cols=70 Identities=14% Similarity=0.206 Sum_probs=43.3
Q ss_pred ccEEEEEeCC-hhHHHHHHHHHhcCCCcEEEEecCCCCC-cC--------CCCCccccCCCCCCHHHHHHHHHHc-----
Q 010065 82 RVVVLVIGGG-GREHALCYALKRSHSCDAVFCAPGNAGI-SN--------SGDATCIPDLDVLDGDAVISFCRKW----- 146 (519)
Q Consensus 82 ~~~vliiG~g-~~~~~l~~~l~~~~g~~~v~~~~~~~~~-~~--------~~~~~~v~~~d~~d~~~l~~~~~~~----- 146 (519)
.++++|+|++ +....++..|.+. |++++.++..+... .. ......+ ..|..|.+.+.+++++.
T Consensus 5 ~~~vlItGasggiG~~~a~~l~~~-G~~V~~~~~r~~~~~~~~~~~~~~~~~~~~~~-~~D~~~~~~~~~~~~~~~~~~~ 82 (247)
T 2hq1_A 5 GKTAIVTGSSRGLGKAIAWKLGNM-GANIVLNGSPASTSLDATAEEFKAAGINVVVA-KGDVKNPEDVENMVKTAMDAFG 82 (247)
T ss_dssp TCEEEESSCSSHHHHHHHHHHHHT-TCEEEEEECTTCSHHHHHHHHHHHTTCCEEEE-ESCTTSHHHHHHHHHHHHHHHS
T ss_pred CcEEEEECCCchHHHHHHHHHHHC-CCEEEEEcCcCHHHHHHHHHHHHhcCCcEEEE-ECCCCCHHHHHHHHHHHHHhcC
Confidence 4689999976 3556788888877 88887763222211 00 0011222 56788877776665542
Q ss_pred CCcEEEE
Q 010065 147 SVGLVVV 153 (519)
Q Consensus 147 ~id~Vi~ 153 (519)
++|.+|.
T Consensus 83 ~~d~vi~ 89 (247)
T 2hq1_A 83 RIDILVN 89 (247)
T ss_dssp CCCEEEE
T ss_pred CCCEEEE
Confidence 7999887
No 236
>3euw_A MYO-inositol dehydrogenase; protein structure initiative II (PSI II), NYSGXRC, MYO-inosi dehydrogenase, oxidoreductase, tetramer; 2.30A {Corynebacterium glutamicum}
Probab=62.55 E-value=6 Score=38.60 Aligned_cols=143 Identities=13% Similarity=0.098 Sum_probs=71.8
Q ss_pred CccEEEEEeCChhHHHHHHHHHhcCCCcEEEEecCCCCC-cCCCCCccccCCCCCCHHHHHHHHHHcCCcEEEECCChhh
Q 010065 81 QRVVVLVIGGGGREHALCYALKRSHSCDAVFCAPGNAGI-SNSGDATCIPDLDVLDGDAVISFCRKWSVGLVVVGPEAPL 159 (519)
Q Consensus 81 ~~~~vliiG~g~~~~~l~~~l~~~~g~~~v~~~~~~~~~-~~~~~~~~v~~~d~~d~~~l~~~~~~~~id~Vi~g~E~~~ 159 (519)
++++|.|||.|......+..+.+..+++.+.+.+.+... .... ..+...-..+.+++ +...++|+|+...-...
T Consensus 3 ~~~rvgiiG~G~~g~~~~~~l~~~~~~~l~av~d~~~~~~~~~a--~~~g~~~~~~~~~~---l~~~~~D~V~i~tp~~~ 77 (344)
T 3euw_A 3 LTLRIALFGAGRIGHVHAANIAANPDLELVVIADPFIEGAQRLA--EANGAEAVASPDEV---FARDDIDGIVIGSPTST 77 (344)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHCTTEEEEEEECSSHHHHHHHH--HTTTCEEESSHHHH---TTCSCCCEEEECSCGGG
T ss_pred CceEEEEECCcHHHHHHHHHHHhCCCcEEEEEECCCHHHHHHHH--HHcCCceeCCHHHH---hcCCCCCEEEEeCCchh
Confidence 357999999997655667777776677776553322211 0000 00000011334443 44567999998654444
Q ss_pred HHHHHHHHHHCCCCeeCCcHHHHHHhcCHHHHHHHHHHcCCCCCC-ee-ec-CCHHHHHHHHHH--hCCCEEEEe
Q 010065 160 VSGLANKLVKAGIPTFGPSSEAAALEGSKNFMKNLCDKYGIPTAK-YK-TF-TDPNAAKQYIQE--EGAPIVVKA 229 (519)
Q Consensus 160 ~~~~a~~le~~gip~~g~~~~~~~~~~dK~~~k~~l~~~Gi~~p~-~~-~v-~~~~~~~~~~~~--~g~P~VvKP 229 (519)
-..++..+-+.|.+++.-.+-+... .+=..+.+.+++.|+..-- +. .. .....+.+.+++ +|-+..+.-
T Consensus 78 h~~~~~~al~~gk~v~~EKP~~~~~-~~~~~l~~~a~~~g~~~~v~~~~r~~p~~~~~k~~i~~g~iG~i~~v~~ 151 (344)
T 3euw_A 78 HVDLITRAVERGIPALCEKPIDLDI-EMVRACKEKIGDGASKVMLGFNRRFDPSFAAINARVANQEIGNLEQLVI 151 (344)
T ss_dssp HHHHHHHHHHTTCCEEECSCSCSCH-HHHHHHHHHHGGGGGGEEECCGGGGCHHHHHHHHHHHTTTTSSEEEEEE
T ss_pred hHHHHHHHHHcCCcEEEECCCCCCH-HHHHHHHHHHHhcCCeEEecchhhcCHHHHHHHHHHhcCCCCceEEEEE
Confidence 3345555667788876333322111 1112344556666653311 11 11 122345555544 676665554
No 237
>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron}
Probab=62.49 E-value=6.7 Score=36.33 Aligned_cols=71 Identities=15% Similarity=0.256 Sum_probs=44.3
Q ss_pred CccEEEEEeCC-hhHHHHHHHHHhcCCCcEEEEecCCCCCcC----------C-CCCccccCCCCCCHHHHHHHHHH---
Q 010065 81 QRVVVLVIGGG-GREHALCYALKRSHSCDAVFCAPGNAGISN----------S-GDATCIPDLDVLDGDAVISFCRK--- 145 (519)
Q Consensus 81 ~~~~vliiG~g-~~~~~l~~~l~~~~g~~~v~~~~~~~~~~~----------~-~~~~~v~~~d~~d~~~l~~~~~~--- 145 (519)
+.++++|+|++ +....+++.|.+. |.++++++.+...... . .....+ ..|..|.+.+.+++++
T Consensus 6 ~~k~~lVTGas~GIG~aia~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~-~~Dv~~~~~v~~~~~~~~~ 83 (250)
T 3nyw_A 6 QKGLAIITGASQGIGAVIAAGLATD-GYRVVLIARSKQNLEKVHDEIMRSNKHVQEPIVL-PLDITDCTKADTEIKDIHQ 83 (250)
T ss_dssp CCCEEEEESTTSHHHHHHHHHHHHH-TCEEEEEESCHHHHHHHHHHHHHHCTTSCCCEEE-ECCTTCHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHC-CCEEEEEECCHHHHHHHHHHHHHhccccCcceEE-eccCCCHHHHHHHHHHHHH
Confidence 35789999976 4556788888887 8888777543111000 0 111223 5688887776666554
Q ss_pred --cCCcEEEE
Q 010065 146 --WSVGLVVV 153 (519)
Q Consensus 146 --~~id~Vi~ 153 (519)
.++|+++.
T Consensus 84 ~~g~iD~lvn 93 (250)
T 3nyw_A 84 KYGAVDILVN 93 (250)
T ss_dssp HHCCEEEEEE
T ss_pred hcCCCCEEEE
Confidence 26898887
No 238
>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2
Probab=62.44 E-value=9.1 Score=35.78 Aligned_cols=70 Identities=19% Similarity=0.336 Sum_probs=43.4
Q ss_pred ccEEEEEeCC-hhHHHHHHHHHhcCCCcEEEEecCCCCCcC--------CCCCccccCCCCCCHHHHHHHHHHc-----C
Q 010065 82 RVVVLVIGGG-GREHALCYALKRSHSCDAVFCAPGNAGISN--------SGDATCIPDLDVLDGDAVISFCRKW-----S 147 (519)
Q Consensus 82 ~~~vliiG~g-~~~~~l~~~l~~~~g~~~v~~~~~~~~~~~--------~~~~~~v~~~d~~d~~~l~~~~~~~-----~ 147 (519)
.++++|+|++ +....++..|.+. |.+++.++.+...... -.....+ ..|..|.+.+.+++++. +
T Consensus 31 ~k~vlITGasggIG~~la~~L~~~-G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~-~~Dl~~~~~v~~~~~~~~~~~g~ 108 (272)
T 1yb1_A 31 GEIVLITGAGHGIGRLTAYEFAKL-KSKLVLWDINKHGLEETAAKCKGLGAKVHTF-VVDCSNREDIYSSAKKVKAEIGD 108 (272)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHHTTCCEEEE-ECCTTCHHHHHHHHHHHHHHTCC
T ss_pred CCEEEEECCCchHHHHHHHHHHHC-CCEEEEEEcCHHHHHHHHHHHHhcCCeEEEE-EeeCCCHHHHHHHHHHHHHHCCC
Confidence 4789999966 4556788888887 8887776533111000 0011222 56778877776665542 6
Q ss_pred CcEEEE
Q 010065 148 VGLVVV 153 (519)
Q Consensus 148 id~Vi~ 153 (519)
+|+||.
T Consensus 109 iD~li~ 114 (272)
T 1yb1_A 109 VSILVN 114 (272)
T ss_dssp CSEEEE
T ss_pred CcEEEE
Confidence 899887
No 239
>1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A*
Probab=62.36 E-value=9 Score=36.31 Aligned_cols=71 Identities=21% Similarity=0.286 Sum_probs=44.5
Q ss_pred CccEEEEEeCC-hhHHHHHHHHHhcCCCcEEEEecCCCCCcC---------CCCCccccCCCCCCHHHHHHHHHHc----
Q 010065 81 QRVVVLVIGGG-GREHALCYALKRSHSCDAVFCAPGNAGISN---------SGDATCIPDLDVLDGDAVISFCRKW---- 146 (519)
Q Consensus 81 ~~~~vliiG~g-~~~~~l~~~l~~~~g~~~v~~~~~~~~~~~---------~~~~~~v~~~d~~d~~~l~~~~~~~---- 146 (519)
+.++++|+|++ +....++..|.+. |++++.++.+...... ......+ ..|..|.+.+.+++++.
T Consensus 25 ~~k~vlITGasggiG~~la~~L~~~-G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~-~~Dl~~~~~~~~~~~~~~~~~ 102 (302)
T 1w6u_A 25 QGKVAFITGGGTGLGKGMTTLLSSL-GAQCVIASRKMDVLKATAEQISSQTGNKVHAI-QCDVRDPDMVQNTVSELIKVA 102 (302)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHHHHSSCEEEE-ECCTTCHHHHHHHHHHHHHHT
T ss_pred CCCEEEEECCCchHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHHHHhcCCceEEE-EeCCCCHHHHHHHHHHHHHHc
Confidence 34789999976 4566788888887 8888776543111000 0111223 56888877777666543
Q ss_pred -CCcEEEE
Q 010065 147 -SVGLVVV 153 (519)
Q Consensus 147 -~id~Vi~ 153 (519)
++|++|.
T Consensus 103 g~id~li~ 110 (302)
T 1w6u_A 103 GHPNIVIN 110 (302)
T ss_dssp CSCSEEEE
T ss_pred CCCCEEEE
Confidence 6899987
No 240
>3pdi_B Nitrogenase MOFE cofactor biosynthesis protein NI; nitrogenase cofactor maturation, NIFB, nifdk, NIFH; HET: CZL; 2.40A {Azotobacter vinelandii}
Probab=62.18 E-value=27 Score=35.65 Aligned_cols=84 Identities=13% Similarity=0.056 Sum_probs=53.4
Q ss_pred ccEEEEEeCChhHHHHHHHHHhcCCCcEEEEecCCCCCcCCC-CCccccCCCCCCHHHHHHHHHHcCCcEEEECCChhhH
Q 010065 82 RVVVLVIGGGGREHALCYALKRSHSCDAVFCAPGNAGISNSG-DATCIPDLDVLDGDAVISFCRKWSVGLVVVGPEAPLV 160 (519)
Q Consensus 82 ~~~vliiG~g~~~~~l~~~l~~~~g~~~v~~~~~~~~~~~~~-~~~~v~~~d~~d~~~l~~~~~~~~id~Vi~g~E~~~~ 160 (519)
.+++.|.|.+.....+++.|. +.|.+++.+........... ....+ -..|...+.+++++.++|+++-+.-..
T Consensus 313 Gkrv~i~~~~~~~~~l~~~L~-elGm~vv~~~~~~~~~~~~~~~~~~v---~~~D~~~le~~i~~~~pDllig~~~~~-- 386 (458)
T 3pdi_B 313 SARTAIAADPDLLLGFDALLR-SMGAHTVAAVVPARAAALVDSPLPSV---RVGDLEDLEHAARAGQAQLVIGNSHAL-- 386 (458)
T ss_dssp TCEEEEECCHHHHHHHHHHHH-TTTCEEEEEEESSCCSCCTTTTSSCE---EESHHHHHHHHHHHHTCSEEEECTTHH--
T ss_pred CCEEEEECCcHHHHHHHHHHH-HCCCEEEEEEECCCChhhhhCccCcE---EeCCHHHHHHHHHhcCCCEEEEChhHH--
Confidence 479999888877777888885 55999887643321111100 01112 124677788888899999999754332
Q ss_pred HHHHHHHHHCCCCee
Q 010065 161 SGLANKLVKAGIPTF 175 (519)
Q Consensus 161 ~~~a~~le~~gip~~ 175 (519)
.+ .+++|+|++
T Consensus 387 -~~---a~k~gip~~ 397 (458)
T 3pdi_B 387 -AS---ARRLGVPLL 397 (458)
T ss_dssp -HH---HHHTTCCEE
T ss_pred -HH---HHHcCCCEE
Confidence 12 567888876
No 241
>3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} SCOP: c.2.1.0 PDB: 3sj7_A*
Probab=62.02 E-value=8.4 Score=35.42 Aligned_cols=71 Identities=20% Similarity=0.274 Sum_probs=44.3
Q ss_pred CccEEEEEeCC-hhHHHHHHHHHhcCCCcEEEEecCCCCC-cC--------CCCCccccCCCCCCHHHHHHHHHHc----
Q 010065 81 QRVVVLVIGGG-GREHALCYALKRSHSCDAVFCAPGNAGI-SN--------SGDATCIPDLDVLDGDAVISFCRKW---- 146 (519)
Q Consensus 81 ~~~~vliiG~g-~~~~~l~~~l~~~~g~~~v~~~~~~~~~-~~--------~~~~~~v~~~d~~d~~~l~~~~~~~---- 146 (519)
..++++|+|++ +....++..|.+. |.++++++..+... .. -.....+ ..|..|.+.+.+++++.
T Consensus 3 ~~k~~lVTGas~gIG~~ia~~l~~~-G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~Dv~d~~~v~~~~~~~~~~~ 80 (246)
T 3osu_A 3 MTKSALVTGASRGIGRSIALQLAEE-GYNVAVNYAGSKEKAEAVVEEIKAKGVDSFAI-QANVADADEVKAMIKEVVSQF 80 (246)
T ss_dssp CSCEEEETTCSSHHHHHHHHHHHHT-TCEEEEEESSCHHHHHHHHHHHHHTTSCEEEE-ECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCChHHHHHHHHHHHC-CCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEE-EccCCCHHHHHHHHHHHHHHc
Confidence 34678898866 4556788888887 88887765432110 00 0011223 56888877777666543
Q ss_pred -CCcEEEE
Q 010065 147 -SVGLVVV 153 (519)
Q Consensus 147 -~id~Vi~ 153 (519)
++|.++.
T Consensus 81 g~id~lv~ 88 (246)
T 3osu_A 81 GSLDVLVN 88 (246)
T ss_dssp SCCCEEEE
T ss_pred CCCCEEEE
Confidence 7999987
No 242
>1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A*
Probab=62.01 E-value=9.5 Score=34.70 Aligned_cols=69 Identities=20% Similarity=0.213 Sum_probs=43.3
Q ss_pred ccEEEEEeCC-hhHHHHHHHHHhcC-CCcEEEEecCCCCCcCC-CCCccccCCCCCCHHHHHHHHHHcCCcEEEE
Q 010065 82 RVVVLVIGGG-GREHALCYALKRSH-SCDAVFCAPGNAGISNS-GDATCIPDLDVLDGDAVISFCRKWSVGLVVV 153 (519)
Q Consensus 82 ~~~vliiG~g-~~~~~l~~~l~~~~-g~~~v~~~~~~~~~~~~-~~~~~v~~~d~~d~~~l~~~~~~~~id~Vi~ 153 (519)
+++|+|+|+. +....+++.|.+.. |++++.++.+....... .....+ ..|..|.+.+.++.+ ++|.||.
T Consensus 4 ~~~ilVtGasG~iG~~l~~~l~~~~~g~~V~~~~r~~~~~~~~~~~~~~~-~~D~~d~~~~~~~~~--~~d~vi~ 75 (253)
T 1xq6_A 4 LPTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGKEKIGGEADVF-IGDITDADSINPAFQ--GIDALVI 75 (253)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTTTTCEEEEEESCHHHHHHTTCCTTEE-ECCTTSHHHHHHHHT--TCSEEEE
T ss_pred CCEEEEEcCCcHHHHHHHHHHHhcCCCcEEEEEEcCCCchhhcCCCeeEE-EecCCCHHHHHHHHc--CCCEEEE
Confidence 5789999965 45567888888764 67777665431110000 111223 568888888877764 5898887
No 243
>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}
Probab=61.96 E-value=12 Score=35.76 Aligned_cols=71 Identities=20% Similarity=0.235 Sum_probs=44.7
Q ss_pred CccEEEEEeCC-hhHHHHHHHHHhcCCCcEEEEecCCCCCcC--------CCCCccccCCCCCCHHHHHHHHHHc-----
Q 010065 81 QRVVVLVIGGG-GREHALCYALKRSHSCDAVFCAPGNAGISN--------SGDATCIPDLDVLDGDAVISFCRKW----- 146 (519)
Q Consensus 81 ~~~~vliiG~g-~~~~~l~~~l~~~~g~~~v~~~~~~~~~~~--------~~~~~~v~~~d~~d~~~l~~~~~~~----- 146 (519)
+.++++|+|++ +....++..|.+. |+++++++.+...... ......+ ..|..|.+.+.+++++.
T Consensus 30 ~gk~vlVTGas~gIG~~la~~l~~~-G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~-~~Dv~d~~~v~~~~~~~~~~~g 107 (301)
T 3tjr_A 30 DGRAAVVTGGASGIGLATATEFARR-GARLVLSDVDQPALEQAVNGLRGQGFDAHGV-VCDVRHLDEMVRLADEAFRLLG 107 (301)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHHTTCCEEEE-ECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHC-CCEEEEEECCHHHHHHHHHHHHhcCCceEEE-EccCCCHHHHHHHHHHHHHhCC
Confidence 45789999976 4566788888887 8888777543111000 0011222 56888877776666543
Q ss_pred CCcEEEE
Q 010065 147 SVGLVVV 153 (519)
Q Consensus 147 ~id~Vi~ 153 (519)
++|++|.
T Consensus 108 ~id~lvn 114 (301)
T 3tjr_A 108 GVDVVFS 114 (301)
T ss_dssp SCSEEEE
T ss_pred CCCEEEE
Confidence 7999887
No 244
>3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus}
Probab=61.93 E-value=8 Score=35.78 Aligned_cols=71 Identities=18% Similarity=0.265 Sum_probs=44.9
Q ss_pred CccEEEEEeCC-hhHHHHHHHHHhcCCCcEEEEecCCCCCcC----C-CCCccccCCCCCCHHHHHHHHHHc-----CCc
Q 010065 81 QRVVVLVIGGG-GREHALCYALKRSHSCDAVFCAPGNAGISN----S-GDATCIPDLDVLDGDAVISFCRKW-----SVG 149 (519)
Q Consensus 81 ~~~~vliiG~g-~~~~~l~~~l~~~~g~~~v~~~~~~~~~~~----~-~~~~~v~~~d~~d~~~l~~~~~~~-----~id 149 (519)
+.++++|+|++ +....+++.|.+. |.+++.++.+...... . .....+ ..|..|.+.+.+++++. ++|
T Consensus 8 ~~k~vlITGas~gIG~~~a~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~-~~D~~~~~~~~~~~~~~~~~~g~id 85 (261)
T 3n74_A 8 EGKVALITGAGSGFGEGMAKRFAKG-GAKVVIVDRDKAGAERVAGEIGDAALAV-AADISKEADVDAAVEAALSKFGKVD 85 (261)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHCTTEEEE-ECCTTSHHHHHHHHHHHHHHHSCCC
T ss_pred CCCEEEEECCCchHHHHHHHHHHHC-CCEEEEEcCCHHHHHHHHHHhCCceEEE-EecCCCHHHHHHHHHHHHHhcCCCC
Confidence 35789999976 4566788998887 8888777543211000 0 011222 56888877776666543 799
Q ss_pred EEEE
Q 010065 150 LVVV 153 (519)
Q Consensus 150 ~Vi~ 153 (519)
.++.
T Consensus 86 ~li~ 89 (261)
T 3n74_A 86 ILVN 89 (261)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 9987
No 245
>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2
Probab=61.91 E-value=8.3 Score=36.19 Aligned_cols=70 Identities=21% Similarity=0.281 Sum_probs=43.2
Q ss_pred ccEEEEEeCC-hhHHHHHHHHHhcCCCcEEEEecCCCCCcCC----------CCCccccCCCCCCHHHHHHHHHHc----
Q 010065 82 RVVVLVIGGG-GREHALCYALKRSHSCDAVFCAPGNAGISNS----------GDATCIPDLDVLDGDAVISFCRKW---- 146 (519)
Q Consensus 82 ~~~vliiG~g-~~~~~l~~~l~~~~g~~~v~~~~~~~~~~~~----------~~~~~v~~~d~~d~~~l~~~~~~~---- 146 (519)
.++++|+|++ +....++..|.+. |++++.++.+....... .....+ ..|..|.+.+.+++++.
T Consensus 32 ~k~vlVTGasggIG~~la~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~-~~Dl~~~~~v~~~~~~~~~~~ 109 (279)
T 1xg5_A 32 DRLALVTGASGGIGAAVARALVQQ-GLKVVGCARTVGNIEELAAECKSAGYPGTLIPY-RCDLSNEEDILSMFSAIRSQH 109 (279)
T ss_dssp TCEEEEESTTSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHHTTCSSEEEEE-ECCTTCHHHHHHHHHHHHHHH
T ss_pred CCEEEEECCCchHHHHHHHHHHHC-CCEEEEEECChHHHHHHHHHHHhcCCCceEEEE-EecCCCHHHHHHHHHHHHHhC
Confidence 4689999976 4556788888877 88887765431100000 001122 46888877776665532
Q ss_pred -CCcEEEE
Q 010065 147 -SVGLVVV 153 (519)
Q Consensus 147 -~id~Vi~ 153 (519)
++|+||.
T Consensus 110 g~iD~vi~ 117 (279)
T 1xg5_A 110 SGVDICIN 117 (279)
T ss_dssp CCCSEEEE
T ss_pred CCCCEEEE
Confidence 6999987
No 246
>2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2
Probab=61.75 E-value=8.4 Score=35.98 Aligned_cols=70 Identities=20% Similarity=0.143 Sum_probs=43.9
Q ss_pred ccEEEEEeCC-hhHHHHHHHHHhcCCCcEEEEecCCCCCc----CC-CCCccccCCCCCCHHHHHHHHHHc-----CCcE
Q 010065 82 RVVVLVIGGG-GREHALCYALKRSHSCDAVFCAPGNAGIS----NS-GDATCIPDLDVLDGDAVISFCRKW-----SVGL 150 (519)
Q Consensus 82 ~~~vliiG~g-~~~~~l~~~l~~~~g~~~v~~~~~~~~~~----~~-~~~~~v~~~d~~d~~~l~~~~~~~-----~id~ 150 (519)
.++++|+|++ +....++..|.+. |++++.++.+..... .. .....+ ..|..|.+.+.+++++. ++|+
T Consensus 6 ~k~vlITGas~gIG~aia~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~-~~D~~~~~~v~~~~~~~~~~~g~iD~ 83 (263)
T 2a4k_A 6 GKTILVTGAASGIGRAALDLFARE-GASLVAVDREERLLAEAVAALEAEAIAV-VADVSDPKAVEAVFAEALEEFGRLHG 83 (263)
T ss_dssp TCEEEEESTTSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHTCCSSEEEE-ECCTTSHHHHHHHHHHHHHHHSCCCE
T ss_pred CCEEEEECCCCHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHhcCceEEE-EcCCCCHHHHHHHHHHHHHHcCCCcE
Confidence 4689999976 4556788888887 888877754311100 00 111222 56888877776665542 6899
Q ss_pred EEE
Q 010065 151 VVV 153 (519)
Q Consensus 151 Vi~ 153 (519)
++.
T Consensus 84 lvn 86 (263)
T 2a4k_A 84 VAH 86 (263)
T ss_dssp EEE
T ss_pred EEE
Confidence 987
No 247
>2h7i_A Enoyl-[acyl-carrier-protein] reductase [NADH]; oxidoreductase, INHA, enoyl acyl carrier reductase, pyrrolid carboxamide; HET: NAD 566; 1.62A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1p44_A* 1p45_A* 2b35_A* 2b36_A* 2b37_A* 2aq8_A* 2h7l_A* 2h7m_A* 2h7n_A* 2h7p_A* 2nsd_A* 2pr2_A* 2x22_A* 2x23_A* 3fne_A* 3fnf_A* 3fng_A* 3fnh_A* 3oew_A* 2aqh_A* ...
Probab=61.63 E-value=15 Score=34.15 Aligned_cols=70 Identities=16% Similarity=0.174 Sum_probs=43.6
Q ss_pred ccEEEEEeC---ChhHHHHHHHHHhcCCCcEEEEecCCCCC-c----CC-CCCccccCCCCCCHHHHHHHHHHc------
Q 010065 82 RVVVLVIGG---GGREHALCYALKRSHSCDAVFCAPGNAGI-S----NS-GDATCIPDLDVLDGDAVISFCRKW------ 146 (519)
Q Consensus 82 ~~~vliiG~---g~~~~~l~~~l~~~~g~~~v~~~~~~~~~-~----~~-~~~~~v~~~d~~d~~~l~~~~~~~------ 146 (519)
.++++|+|+ ++....++..|.+. |.+++.++.+.... . .. .....+ ..|..|.+.+.+++++.
T Consensus 7 ~k~vlVTGa~~s~gIG~aia~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~-~~Dv~~~~~v~~~~~~~~~~~g~ 84 (269)
T 2h7i_A 7 GKRILVSGIITDSSIAFHIARVAQEQ-GAQLVLTGFDRLRLIQRITDRLPAKAPLL-ELDVQNEEHLASLAGRVTEAIGA 84 (269)
T ss_dssp TCEEEECCCSSTTSHHHHHHHHHHHT-TCEEEEEECSCHHHHHHHHTTSSSCCCEE-ECCTTCHHHHHHHHHHHHHHHCT
T ss_pred CCEEEEECCCCCCchHHHHHHHHHHC-CCEEEEEecChHHHHHHHHHhcCCCceEE-EccCCCHHHHHHHHHHHHHHhCC
Confidence 468999995 56667789999887 88877765432110 0 00 011222 46777777666655532
Q ss_pred --CCcEEEE
Q 010065 147 --SVGLVVV 153 (519)
Q Consensus 147 --~id~Vi~ 153 (519)
++|+++.
T Consensus 85 ~~~iD~lv~ 93 (269)
T 2h7i_A 85 GNKLDGVVH 93 (269)
T ss_dssp TCCEEEEEE
T ss_pred CCCceEEEE
Confidence 7888887
No 248
>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A*
Probab=61.60 E-value=12 Score=34.70 Aligned_cols=71 Identities=13% Similarity=0.172 Sum_probs=43.5
Q ss_pred CccEEEEEeCC-hhHHHHHHHHHhcCCCcEEEEecCCCCCcC--------CCCCccccCCCCCCHHHHHHHHHH------
Q 010065 81 QRVVVLVIGGG-GREHALCYALKRSHSCDAVFCAPGNAGISN--------SGDATCIPDLDVLDGDAVISFCRK------ 145 (519)
Q Consensus 81 ~~~~vliiG~g-~~~~~l~~~l~~~~g~~~v~~~~~~~~~~~--------~~~~~~v~~~d~~d~~~l~~~~~~------ 145 (519)
+.++++|+|++ +....++..|.+. |++++.++.+...... -.....+ ..|..|.+.+.+++++
T Consensus 8 ~~k~vlVTGas~giG~~ia~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~-~~D~~~~~~~~~~~~~~~~~~~ 85 (260)
T 2ae2_A 8 EGCTALVTGGSRGIGYGIVEELASL-GASVYTCSRNQKELNDCLTQWRSKGFKVEAS-VCDLSSRSERQELMNTVANHFH 85 (260)
T ss_dssp TTCEEEEESCSSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHHTTCEEEEE-ECCTTCHHHHHHHHHHHHHHTT
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHHHhcCCcEEEE-EcCCCCHHHHHHHHHHHHHHcC
Confidence 35789999976 4566788888887 8888776543111000 0011122 4677787666665543
Q ss_pred cCCcEEEE
Q 010065 146 WSVGLVVV 153 (519)
Q Consensus 146 ~~id~Vi~ 153 (519)
.++|+++.
T Consensus 86 g~id~lv~ 93 (260)
T 2ae2_A 86 GKLNILVN 93 (260)
T ss_dssp TCCCEEEE
T ss_pred CCCCEEEE
Confidence 36999887
No 249
>3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} SCOP: c.2.1.0
Probab=61.39 E-value=6.3 Score=36.13 Aligned_cols=70 Identities=17% Similarity=0.119 Sum_probs=43.2
Q ss_pred ccEEEEEeCC-hhHHHHHHHHHhcCCCcEEEEecCCCCCcCC-----CCCccccCCCCCCHHHHHHHHHHc-----CCcE
Q 010065 82 RVVVLVIGGG-GREHALCYALKRSHSCDAVFCAPGNAGISNS-----GDATCIPDLDVLDGDAVISFCRKW-----SVGL 150 (519)
Q Consensus 82 ~~~vliiG~g-~~~~~l~~~l~~~~g~~~v~~~~~~~~~~~~-----~~~~~v~~~d~~d~~~l~~~~~~~-----~id~ 150 (519)
.++++|+|++ +....++..|.+. |.+++.++.+....... .....+ ..|..|.+.+.+++++. ++|+
T Consensus 3 ~k~vlVTGas~GIG~a~a~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~-~~D~~~~~~v~~~~~~~~~~~g~id~ 80 (235)
T 3l6e_A 3 LGHIIVTGAGSGLGRALTIGLVER-GHQVSMMGRRYQRLQQQELLLGNAVIGI-VADLAHHEDVDVAFAAAVEWGGLPEL 80 (235)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHGGGEEEE-ECCTTSHHHHHHHHHHHHHHHCSCSE
T ss_pred CCEEEEECCCCHHHHHHHHHHHHC-CCEEEEEECCHHHHHHHHHHhcCCceEE-ECCCCCHHHHHHHHHHHHHhcCCCcE
Confidence 3679999976 4566788888877 89887775431110000 011122 56888877766665542 6898
Q ss_pred EEE
Q 010065 151 VVV 153 (519)
Q Consensus 151 Vi~ 153 (519)
++.
T Consensus 81 lvn 83 (235)
T 3l6e_A 81 VLH 83 (235)
T ss_dssp EEE
T ss_pred EEE
Confidence 887
No 250
>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A*
Probab=61.35 E-value=17 Score=34.38 Aligned_cols=71 Identities=15% Similarity=0.145 Sum_probs=44.4
Q ss_pred CccEEEEEeCC---hhHHHHHHHHHhcCCCcEEEEecCCCCCcC-------CCCCccccCCCCCCHHHHHHHHHHc----
Q 010065 81 QRVVVLVIGGG---GREHALCYALKRSHSCDAVFCAPGNAGISN-------SGDATCIPDLDVLDGDAVISFCRKW---- 146 (519)
Q Consensus 81 ~~~~vliiG~g---~~~~~l~~~l~~~~g~~~v~~~~~~~~~~~-------~~~~~~v~~~d~~d~~~l~~~~~~~---- 146 (519)
+.++++|+|++ +....+++.|.+. |.++++++.+...... ......+ ..|..|.+.+.+++++.
T Consensus 29 ~~k~vlVTGasg~~GIG~~ia~~la~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~-~~Dv~d~~~v~~~~~~~~~~~ 106 (296)
T 3k31_A 29 EGKKGVIIGVANDKSLAWGIAKAVCAQ-GAEVALTYLSETFKKRVDPLAESLGVKLTV-PCDVSDAESVDNMFKVLAEEW 106 (296)
T ss_dssp TTCEEEEECCCSTTSHHHHHHHHHHHT-TCEEEEEESSGGGHHHHHHHHHHHTCCEEE-ECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEEeCCCCCCHHHHHHHHHHHC-CCEEEEEeCChHHHHHHHHHHHhcCCeEEE-EcCCCCHHHHHHHHHHHHHHc
Confidence 45789999975 5667789999887 8988776543210000 0011122 56777777666665542
Q ss_pred -CCcEEEE
Q 010065 147 -SVGLVVV 153 (519)
Q Consensus 147 -~id~Vi~ 153 (519)
++|+++.
T Consensus 107 g~iD~lVn 114 (296)
T 3k31_A 107 GSLDFVVH 114 (296)
T ss_dssp SCCSEEEE
T ss_pred CCCCEEEE
Confidence 6888887
No 251
>3fhl_A Putative oxidoreductase; NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 1.93A {Bacteroides fragilis nctc 9343}
Probab=61.04 E-value=5.1 Score=39.55 Aligned_cols=142 Identities=11% Similarity=0.036 Sum_probs=72.0
Q ss_pred CccEEEEEeCChhHHH-HHHHHHhcCCCcEEEEecCCCCCcCCCCCccccCCCCCCHHHHHHHHHHcCCcEEEECCChhh
Q 010065 81 QRVVVLVIGGGGREHA-LCYALKRSHSCDAVFCAPGNAGISNSGDATCIPDLDVLDGDAVISFCRKWSVGLVVVGPEAPL 159 (519)
Q Consensus 81 ~~~~vliiG~g~~~~~-l~~~l~~~~g~~~v~~~~~~~~~~~~~~~~~v~~~d~~d~~~l~~~~~~~~id~Vi~g~E~~~ 159 (519)
++++|.|||.|..... .+..+++..+++++.+.+.++.... ...... .-..|.+++ +...++|+|+...-...
T Consensus 4 ~~~rvgiiG~G~~g~~~~~~~l~~~~~~~l~av~d~~~~~~~-~~~~~~--~~~~~~~~l---l~~~~vD~V~i~tp~~~ 77 (362)
T 3fhl_A 4 EIIKTGLAAFGMSGQVFHAPFISTNPHFELYKIVERSKELSK-ERYPQA--SIVRSFKEL---TEDPEIDLIVVNTPDNT 77 (362)
T ss_dssp CCEEEEESCCSHHHHHTTHHHHHHCTTEEEEEEECSSCCGGG-TTCTTS--EEESCSHHH---HTCTTCCEEEECSCGGG
T ss_pred CceEEEEECCCHHHHHHHHHHHhhCCCeEEEEEEcCCHHHHH-HhCCCC--ceECCHHHH---hcCCCCCEEEEeCChHH
Confidence 4579999999964432 3455555557777666443332211 000000 012344444 34457999998654444
Q ss_pred HHHHHHHHHHCCCCeeCCcHHHHHHhcCHHHHHHHHHHcCCCCCCeee--cC-CHHHHHHHHHH--hCCCEEEEe
Q 010065 160 VSGLANKLVKAGIPTFGPSSEAAALEGSKNFMKNLCDKYGIPTAKYKT--FT-DPNAAKQYIQE--EGAPIVVKA 229 (519)
Q Consensus 160 ~~~~a~~le~~gip~~g~~~~~~~~~~dK~~~k~~l~~~Gi~~p~~~~--v~-~~~~~~~~~~~--~g~P~VvKP 229 (519)
-..++..+-+.|.+++.-.|-+... .+=..+.+++++.|+..--... .. ....+.+.+++ +|-+..+.-
T Consensus 78 H~~~~~~al~aGkhVl~EKP~a~~~-~ea~~l~~~a~~~g~~~~v~~~~R~~p~~~~~k~~i~~G~iG~i~~v~~ 151 (362)
T 3fhl_A 78 HYEYAGMALEAGKNVVVEKPFTSTT-KQGEELIALAKKKGLMLSVYQNRRWDADFLTVRDILAKSLLGRLVEYES 151 (362)
T ss_dssp HHHHHHHHHHTTCEEEEESSCCSSH-HHHHHHHHHHHHHTCCEEEECGGGGSHHHHHHHHHHHTTTTSSEEEEEE
T ss_pred HHHHHHHHHHCCCeEEEecCCCCCH-HHHHHHHHHHHHcCCEEEEEecceeCHHHHHHHHHHHcCCCCCeEEEEE
Confidence 3345555667788776322221111 1112355667778876522111 11 22345555544 666665554
No 252
>3ezl_A Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA reductase, oxidoreductase, structural genomics; HET: P4C; 2.25A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0
Probab=61.04 E-value=11 Score=34.76 Aligned_cols=71 Identities=20% Similarity=0.189 Sum_probs=43.1
Q ss_pred CccEEEEEeCC-hhHHHHHHHHHhcCCCcEEEEecCCCCC-cC--------CCCCccccCCCCCCHHHHHHHHHHc----
Q 010065 81 QRVVVLVIGGG-GREHALCYALKRSHSCDAVFCAPGNAGI-SN--------SGDATCIPDLDVLDGDAVISFCRKW---- 146 (519)
Q Consensus 81 ~~~~vliiG~g-~~~~~l~~~l~~~~g~~~v~~~~~~~~~-~~--------~~~~~~v~~~d~~d~~~l~~~~~~~---- 146 (519)
+.+++||+|++ +....+++.|.+. |.+++.++..+... .. ......+ ..|..|.+.+.+++++.
T Consensus 12 ~~k~vlITGas~giG~~ia~~l~~~-G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~Dv~~~~~v~~~~~~~~~~~ 89 (256)
T 3ezl_A 12 SQRIAYVTGGMGGIGTSICQRLHKD-GFRVVAGCGPNSPRRVKWLEDQKALGFDFYAS-EGNVGDWDSTKQAFDKVKAEV 89 (256)
T ss_dssp -CEEEEETTTTSHHHHHHHHHHHHT-TEEEEEEECTTCSSHHHHHHHHHHTTCCCEEE-ECCTTCHHHHHHHHHHHHHHT
T ss_pred CCCEEEEECCCChHHHHHHHHHHHC-CCEEEEEeCCCHHHHHHHHHHHHhcCCeeEEE-ecCCCCHHHHHHHHHHHHHhc
Confidence 45788999866 4566788888887 88887765222111 00 0011222 46777777666665543
Q ss_pred -CCcEEEE
Q 010065 147 -SVGLVVV 153 (519)
Q Consensus 147 -~id~Vi~ 153 (519)
++|+++.
T Consensus 90 g~id~lv~ 97 (256)
T 3ezl_A 90 GEIDVLVN 97 (256)
T ss_dssp CCEEEEEE
T ss_pred CCCCEEEE
Confidence 6888887
No 253
>3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, 3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus thuringiensis serovar kurstakorganism_taxid} SCOP: c.2.1.0
Probab=61.01 E-value=6.4 Score=36.56 Aligned_cols=70 Identities=9% Similarity=0.107 Sum_probs=43.9
Q ss_pred ccEEEEEeCC-hhHHHHHHHHHhcCCCcEEEEecCCCCC-cC----C----CCCccccCCCCCCHHHHHHHHHHc-----
Q 010065 82 RVVVLVIGGG-GREHALCYALKRSHSCDAVFCAPGNAGI-SN----S----GDATCIPDLDVLDGDAVISFCRKW----- 146 (519)
Q Consensus 82 ~~~vliiG~g-~~~~~l~~~l~~~~g~~~v~~~~~~~~~-~~----~----~~~~~v~~~d~~d~~~l~~~~~~~----- 146 (519)
+++++|+|++ +....+++.|.+. |.+++.+...+... .. . .....+ ..|..|.+.+.+++++.
T Consensus 7 ~k~vlVTGas~gIG~~~a~~l~~~-G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~Dl~~~~~v~~~~~~~~~~~g 84 (264)
T 3i4f_A 7 VRHALITAGTKGLGKQVTEKLLAK-GYSVTVTYHSDTTAMETMKETYKDVEERLQFV-QADVTKKEDLHKIVEEAMSHFG 84 (264)
T ss_dssp CCEEEETTTTSHHHHHHHHHHHHT-TCEEEEEESSCHHHHHHHHHHTGGGGGGEEEE-ECCTTSHHHHHHHHHHHHHHHS
T ss_pred cCEEEEeCCCchhHHHHHHHHHHC-CCEEEEEcCCChHHHHHHHHHHHhcCCceEEE-EecCCCHHHHHHHHHHHHHHhC
Confidence 4678888866 4566788888877 88887764332110 00 0 011122 57888877777766543
Q ss_pred CCcEEEE
Q 010065 147 SVGLVVV 153 (519)
Q Consensus 147 ~id~Vi~ 153 (519)
++|++|.
T Consensus 85 ~id~lv~ 91 (264)
T 3i4f_A 85 KIDFLIN 91 (264)
T ss_dssp CCCEEEC
T ss_pred CCCEEEE
Confidence 7999886
No 254
>4e4y_A Short chain dehydrogenase family protein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; 1.80A {Francisella tularensis subsp}
Probab=60.94 E-value=19 Score=32.89 Aligned_cols=69 Identities=14% Similarity=0.119 Sum_probs=43.3
Q ss_pred ccEEEEEeCC-hhHHHHHHHHHhcCCCcEEEEecCCCCCcCCCCCccccCCCCCCHHHHHHHHHHc---CCcEEEE
Q 010065 82 RVVVLVIGGG-GREHALCYALKRSHSCDAVFCAPGNAGISNSGDATCIPDLDVLDGDAVISFCRKW---SVGLVVV 153 (519)
Q Consensus 82 ~~~vliiG~g-~~~~~l~~~l~~~~g~~~v~~~~~~~~~~~~~~~~~v~~~d~~d~~~l~~~~~~~---~id~Vi~ 153 (519)
.++++|+|++ +....++..|.+..|..++..+...... ......+ ..|..|.+.+.++++.. ++|+++.
T Consensus 4 ~k~vlITGas~gIG~~~a~~l~~~~g~~v~~~~~~~~~~--~~~~~~~-~~Dv~~~~~v~~~~~~~~~~~id~lv~ 76 (244)
T 4e4y_A 4 MANYLVTGGSKGIGKAVVELLLQNKNHTVINIDIQQSFS--AENLKFI-KADLTKQQDITNVLDIIKNVSFDGIFL 76 (244)
T ss_dssp CEEEEEETTTSHHHHHHHHHHTTSTTEEEEEEESSCCCC--CTTEEEE-ECCTTCHHHHHHHHHHTTTCCEEEEEE
T ss_pred CCeEEEeCCCChHHHHHHHHHHhcCCcEEEEeccccccc--cccceEE-ecCcCCHHHHHHHHHHHHhCCCCEEEE
Confidence 4679999976 4556788888874477766654332111 1111223 57888877777776543 6898887
No 255
>3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A*
Probab=60.94 E-value=7.3 Score=36.25 Aligned_cols=71 Identities=14% Similarity=0.144 Sum_probs=43.5
Q ss_pred CccEEEEEeCC-hhHHHHHHHHHhcCCCcEEEEecCCCCC-c-------C-CCCCccccCCCCCCHHHHHHHHHHc----
Q 010065 81 QRVVVLVIGGG-GREHALCYALKRSHSCDAVFCAPGNAGI-S-------N-SGDATCIPDLDVLDGDAVISFCRKW---- 146 (519)
Q Consensus 81 ~~~~vliiG~g-~~~~~l~~~l~~~~g~~~v~~~~~~~~~-~-------~-~~~~~~v~~~d~~d~~~l~~~~~~~---- 146 (519)
+.++++|+|++ +....+++.|.+. |.++++....+... . . -.....+ ..|..|.+.+.+++++.
T Consensus 3 ~~k~vlVTGas~gIG~aia~~l~~~-G~~vv~~~~r~~~~~~~~~~~~~~~~~~~~~~-~~Dv~~~~~v~~~~~~~~~~~ 80 (258)
T 3oid_A 3 QNKCALVTGSSRGVGKAAAIRLAEN-GYNIVINYARSKKAALETAEEIEKLGVKVLVV-KANVGQPAKIKEMFQQIDETF 80 (258)
T ss_dssp CCCEEEESSCSSHHHHHHHHHHHHT-TCEEEEEESSCHHHHHHHHHHHHTTTCCEEEE-ECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEecCCchHHHHHHHHHHHC-CCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEE-EcCCCCHHHHHHHHHHHHHHc
Confidence 35688999866 4566788899887 88887753222110 0 0 0011222 56888877776666543
Q ss_pred -CCcEEEE
Q 010065 147 -SVGLVVV 153 (519)
Q Consensus 147 -~id~Vi~ 153 (519)
++|+++.
T Consensus 81 g~id~lv~ 88 (258)
T 3oid_A 81 GRLDVFVN 88 (258)
T ss_dssp SCCCEEEE
T ss_pred CCCCEEEE
Confidence 7898887
No 256
>4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli}
Probab=60.91 E-value=7.1 Score=36.53 Aligned_cols=71 Identities=24% Similarity=0.273 Sum_probs=42.7
Q ss_pred CccEEEEEeCC-hhHHHHHHHHHhcCCCcEEEEecCCCCC-cC--------CCCCccccCCCCCCHHHHHHHHHHc----
Q 010065 81 QRVVVLVIGGG-GREHALCYALKRSHSCDAVFCAPGNAGI-SN--------SGDATCIPDLDVLDGDAVISFCRKW---- 146 (519)
Q Consensus 81 ~~~~vliiG~g-~~~~~l~~~l~~~~g~~~v~~~~~~~~~-~~--------~~~~~~v~~~d~~d~~~l~~~~~~~---- 146 (519)
+.++++|+|++ +....+++.|.+. |++++++...+... .. ......+ ..|..|.+.+.+++++.
T Consensus 25 ~~k~vlITGas~gIG~a~a~~l~~~-G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~Dl~~~~~v~~~~~~~~~~~ 102 (272)
T 4e3z_A 25 DTPVVLVTGGSRGIGAAVCRLAARQ-GWRVGVNYAANREAADAVVAAITESGGEAVAI-PGDVGNAADIAAMFSAVDRQF 102 (272)
T ss_dssp CSCEEEETTTTSHHHHHHHHHHHHT-TCEEEEEESSCHHHHHHHHHHHHHTTCEEEEE-ECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCchHHHHHHHHHHHC-CCEEEEEcCCChhHHHHHHHHHHhcCCcEEEE-EcCCCCHHHHHHHHHHHHHhC
Confidence 34678888865 4556788888877 88876653222110 00 0011122 56888877776666543
Q ss_pred -CCcEEEE
Q 010065 147 -SVGLVVV 153 (519)
Q Consensus 147 -~id~Vi~ 153 (519)
++|++|.
T Consensus 103 g~id~li~ 110 (272)
T 4e3z_A 103 GRLDGLVN 110 (272)
T ss_dssp SCCCEEEE
T ss_pred CCCCEEEE
Confidence 7999987
No 257
>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=60.71 E-value=12 Score=34.81 Aligned_cols=71 Identities=20% Similarity=0.252 Sum_probs=44.3
Q ss_pred CccEEEEEeCC-hhHHHHHHHHHhcCCCcEEEEecCCCCCcC--------CCCCccccCCCCCCHHHHHHHHHHc-----
Q 010065 81 QRVVVLVIGGG-GREHALCYALKRSHSCDAVFCAPGNAGISN--------SGDATCIPDLDVLDGDAVISFCRKW----- 146 (519)
Q Consensus 81 ~~~~vliiG~g-~~~~~l~~~l~~~~g~~~v~~~~~~~~~~~--------~~~~~~v~~~d~~d~~~l~~~~~~~----- 146 (519)
+.++++|+|++ +....++..|.+. |.++++++.+...... -.....+ ..|..|.+.+.+++++.
T Consensus 10 ~~k~vlVTGas~gIG~aia~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~-~~Dv~~~~~v~~~~~~~~~~~g 87 (264)
T 3ucx_A 10 TDKVVVISGVGPALGTTLARRCAEQ-GADLVLAARTVERLEDVAKQVTDTGRRALSV-GTDITDDAQVAHLVDETMKAYG 87 (264)
T ss_dssp TTCEEEEESCCTTHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHHTTCCEEEE-ECCTTCHHHHHHHHHHHHHHTS
T ss_pred CCcEEEEECCCcHHHHHHHHHHHHC-cCEEEEEeCCHHHHHHHHHHHHhcCCcEEEE-EcCCCCHHHHHHHHHHHHHHcC
Confidence 45789999976 3556788899887 8988777543110000 0011222 56888877766665543
Q ss_pred CCcEEEE
Q 010065 147 SVGLVVV 153 (519)
Q Consensus 147 ~id~Vi~ 153 (519)
++|.++.
T Consensus 88 ~id~lv~ 94 (264)
T 3ucx_A 88 RVDVVIN 94 (264)
T ss_dssp CCSEEEE
T ss_pred CCcEEEE
Confidence 6898887
No 258
>3ged_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3geg_A*
Probab=60.60 E-value=16 Score=33.93 Aligned_cols=69 Identities=19% Similarity=0.261 Sum_probs=43.4
Q ss_pred cEEEEEeCC-hhHHHHHHHHHhcCCCcEEEEecCCCCCc----CCCCCccccCCCCCCHHHHHHHHHH-----cCCcEEE
Q 010065 83 VVVLVIGGG-GREHALCYALKRSHSCDAVFCAPGNAGIS----NSGDATCIPDLDVLDGDAVISFCRK-----WSVGLVV 152 (519)
Q Consensus 83 ~~vliiG~g-~~~~~l~~~l~~~~g~~~v~~~~~~~~~~----~~~~~~~v~~~d~~d~~~l~~~~~~-----~~id~Vi 152 (519)
|+|+|.|++ +...+++..|.++ |.++++++.+..... .......+ ..|..|.+.+.+++++ -++|.++
T Consensus 3 K~vlVTGas~GIG~aia~~la~~-Ga~V~~~~~~~~~~~~~~~~~~~~~~~-~~Dv~~~~~v~~~v~~~~~~~g~iDiLV 80 (247)
T 3ged_A 3 RGVIVTGGGHGIGKQICLDFLEA-GDKVCFIDIDEKRSADFAKERPNLFYF-HGDVADPLTLKKFVEYAMEKLQRIDVLV 80 (247)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHTTCTTEEEE-ECCTTSHHHHHHHHHHHHHHHSCCCEEE
T ss_pred CEEEEecCCCHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHhcCCEEEE-EecCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence 678999866 4567789999888 999888764321110 01111223 5677776666555432 3699998
Q ss_pred E
Q 010065 153 V 153 (519)
Q Consensus 153 ~ 153 (519)
.
T Consensus 81 N 81 (247)
T 3ged_A 81 N 81 (247)
T ss_dssp E
T ss_pred E
Confidence 7
No 259
>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=60.59 E-value=6.5 Score=36.65 Aligned_cols=71 Identities=20% Similarity=0.309 Sum_probs=44.0
Q ss_pred CccEEEEEeCC-hhHHHHHHHHHhcCCCcEEEEecCCCCCc-------CC--CCCccccCCCCCCHHHHHHHHHHc----
Q 010065 81 QRVVVLVIGGG-GREHALCYALKRSHSCDAVFCAPGNAGIS-------NS--GDATCIPDLDVLDGDAVISFCRKW---- 146 (519)
Q Consensus 81 ~~~~vliiG~g-~~~~~l~~~l~~~~g~~~v~~~~~~~~~~-------~~--~~~~~v~~~d~~d~~~l~~~~~~~---- 146 (519)
+.++++|+|++ +....+++.|.+. |.++++++.+..... .. .....+ ..|..|.+.+.+++++.
T Consensus 9 ~~k~vlVTGas~gIG~aia~~l~~~-G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~-~~Dv~~~~~v~~~~~~~~~~~ 86 (262)
T 3pk0_A 9 QGRSVVVTGGTKGIGRGIATVFARA-GANVAVAGRSTADIDACVADLDQLGSGKVIGV-QTDVSDRAQCDALAGRAVEEF 86 (262)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHTTSSSCEEEE-ECCTTSHHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHHHhhCCCcEEEE-EcCCCCHHHHHHHHHHHHHHh
Confidence 35788999866 4556788888887 888877754311100 00 111222 56888877766665532
Q ss_pred -CCcEEEE
Q 010065 147 -SVGLVVV 153 (519)
Q Consensus 147 -~id~Vi~ 153 (519)
++|.++.
T Consensus 87 g~id~lvn 94 (262)
T 3pk0_A 87 GGIDVVCA 94 (262)
T ss_dssp SCCSEEEE
T ss_pred CCCCEEEE
Confidence 7999987
No 260
>2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus}
Probab=60.56 E-value=13 Score=33.89 Aligned_cols=70 Identities=14% Similarity=0.136 Sum_probs=43.2
Q ss_pred ccEEEEEeCC-hhHHHHHHHHHhcCCCcEEEEecCCCCCc-------C--CCCCccccCCCCCCHHHHHHHHHHc-----
Q 010065 82 RVVVLVIGGG-GREHALCYALKRSHSCDAVFCAPGNAGIS-------N--SGDATCIPDLDVLDGDAVISFCRKW----- 146 (519)
Q Consensus 82 ~~~vliiG~g-~~~~~l~~~l~~~~g~~~v~~~~~~~~~~-------~--~~~~~~v~~~d~~d~~~l~~~~~~~----- 146 (519)
.++++|+|++ +....++..|.+. |++++.++.+..... . ......+ ..|..|.+.+.+++++.
T Consensus 2 ~k~vlItGasggiG~~~a~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~-~~D~~~~~~~~~~~~~~~~~~~ 79 (250)
T 2cfc_A 2 SRVAIVTGASSGNGLAIATRFLAR-GDRVAALDLSAETLEETARTHWHAYADKVLRV-RADVADEGDVNAAIAATMEQFG 79 (250)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHSTTTGGGEEEE-ECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCEEEEeCCCchHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHHHHhcCCcEEEE-EecCCCHHHHHHHHHHHHHHhC
Confidence 3678999876 4556788888877 888777654311100 0 0011222 56888877776666542
Q ss_pred CCcEEEE
Q 010065 147 SVGLVVV 153 (519)
Q Consensus 147 ~id~Vi~ 153 (519)
++|++|.
T Consensus 80 ~id~li~ 86 (250)
T 2cfc_A 80 AIDVLVN 86 (250)
T ss_dssp CCCEEEE
T ss_pred CCCEEEE
Confidence 7999987
No 261
>4had_A Probable oxidoreductase protein; structural genomics, protein structure initiative, nysgrc, PSI-biology; 2.00A {Rhizobium etli}
Probab=60.54 E-value=11 Score=36.87 Aligned_cols=141 Identities=11% Similarity=0.012 Sum_probs=72.0
Q ss_pred ccEEEEEeCChhHHH-HHHHHHhcCCCcEEEEecCCCCCcCCCCCccccCC--CCCCHHHHHHHHHHcCCcEEEECCChh
Q 010065 82 RVVVLVIGGGGREHA-LCYALKRSHSCDAVFCAPGNAGISNSGDATCIPDL--DVLDGDAVISFCRKWSVGLVVVGPEAP 158 (519)
Q Consensus 82 ~~~vliiG~g~~~~~-l~~~l~~~~g~~~v~~~~~~~~~~~~~~~~~v~~~--d~~d~~~l~~~~~~~~id~Vi~g~E~~ 158 (519)
++||.|||.|..... .+..+++..+++++.+.+.++..... .+..+ .+ -..|.+++ +...++|+|+...-..
T Consensus 23 mirigiIG~G~ig~~~~~~~~~~~~~~~lvav~d~~~~~a~~-~a~~~-g~~~~y~d~~el---l~~~~iDaV~I~tP~~ 97 (350)
T 4had_A 23 MLRFGIISTAKIGRDNVVPAIQDAENCVVTAIASRDLTRARE-MADRF-SVPHAFGSYEEM---LASDVIDAVYIPLPTS 97 (350)
T ss_dssp CEEEEEESCCHHHHHTHHHHHHHCSSEEEEEEECSSHHHHHH-HHHHH-TCSEEESSHHHH---HHCSSCSEEEECSCGG
T ss_pred ccEEEEEcChHHHHHHHHHHHHhCCCeEEEEEECCCHHHHHH-HHHHc-CCCeeeCCHHHH---hcCCCCCEEEEeCCCc
Confidence 579999999964321 34556666677777664333211100 00111 11 12355555 4466899999865444
Q ss_pred hHHHHHHHHHHCCCCeeCCcHHHHHHhcCHHHHHHHHHHcCCCCCC-eeecC--CHHHHHHHHH--HhCCCEEEE
Q 010065 159 LVSGLANKLVKAGIPTFGPSSEAAALEGSKNFMKNLCDKYGIPTAK-YKTFT--DPNAAKQYIQ--EEGAPIVVK 228 (519)
Q Consensus 159 ~~~~~a~~le~~gip~~g~~~~~~~~~~dK~~~k~~l~~~Gi~~p~-~~~v~--~~~~~~~~~~--~~g~P~VvK 228 (519)
.=..++..+-+.|.+++.-.|-+.... +=..+.+++++.|+..-- +..-. ....+.+.++ .+|-+..+.
T Consensus 98 ~H~~~~~~al~aGkhVl~EKPla~~~~-ea~~l~~~a~~~~~~l~v~~~~R~~p~~~~~k~~i~~G~iG~i~~i~ 171 (350)
T 4had_A 98 QHIEWSIKAADAGKHVVCEKPLALKAG-DIDAVIAARDRNKVVVTEAYMITYSPVWQKVRSLIDEGAIGSLRHVQ 171 (350)
T ss_dssp GHHHHHHHHHHTTCEEEECSCCCSSGG-GGHHHHHHHHHHTCCEEECCGGGGSHHHHHHHHHHHTTTTSSEEEEE
T ss_pred hhHHHHHHHHhcCCEEEEeCCcccchh-hHHHHHHHHHHcCCceeEeeeeecCHHHHHhhHhhhcCCCCcceeee
Confidence 433445555667988774444333222 223345667777765421 11111 2234555554 356565554
No 262
>2jfz_A Glutamate racemase; cell WALL, isomerase, cell shape, peptidoglycan synthesis, peptidoglycan biosynthesis; HET: 003 DGL; 1.86A {Helicobacter pylori} PDB: 2jfx_A* 2jfy_A* 2w4i_A*
Probab=60.49 E-value=29 Score=32.22 Aligned_cols=89 Identities=12% Similarity=0.197 Sum_probs=48.0
Q ss_pred cEEEEEeCChhHHHHHHHHHhcC-CCcEEEEecCCCCCcCCCCCccccCCCCCCHHH-------HHHHHHHcCCcEEEEC
Q 010065 83 VVVLVIGGGGREHALCYALKRSH-SCDAVFCAPGNAGISNSGDATCIPDLDVLDGDA-------VISFCRKWSVGLVVVG 154 (519)
Q Consensus 83 ~~vliiG~g~~~~~l~~~l~~~~-g~~~v~~~~~~~~~~~~~~~~~v~~~d~~d~~~-------l~~~~~~~~id~Vi~g 154 (519)
++|.|+.+|--...+.+.+++.. +.+.+++.+... . +....+.+. ..+.+.+.++|+|+..
T Consensus 1 ~~igvfDSG~GGltv~~~l~~~lP~~~~iy~~D~~~----------~-Pyg~~s~~~i~~~~~~~~~~L~~~g~d~ivia 69 (255)
T 2jfz_A 1 MKIGVFDSGVGGFSVLKSLLKARLFDEIIYYGDSAR----------V-PYGTKDPTTIKQFGLEALDFFKPHEIELLIVA 69 (255)
T ss_dssp CEEEEEESSSTTHHHHHHHHHTTCCSEEEEEECTTT----------C-CCTTSCHHHHHHHHHHHHHHHGGGCCSCEEEC
T ss_pred CcEEEEECCccHHHHHHHHHHHCCCCCEEEEeCCCC----------C-CCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEe
Confidence 46889888743445677777653 566666543311 1 111112222 2233345689999987
Q ss_pred CChhhHHHHHHHHHHCCCCeeCCcHHHH
Q 010065 155 PEAPLVSGLANKLVKAGIPTFGPSSEAA 182 (519)
Q Consensus 155 ~E~~~~~~~a~~le~~gip~~g~~~~~~ 182 (519)
+-......+...-+..++|++|.-..++
T Consensus 70 CNTa~~~~~~~lr~~~~iPvigii~~av 97 (255)
T 2jfz_A 70 CNTASALALEEMQKYSKIPIVGVIEPSI 97 (255)
T ss_dssp CHHHHHHTHHHHHHHCSSCEECSSHHHH
T ss_pred CchhhHHHHHHHHHhCCCCEEeeeHHHH
Confidence 6555321233334568999998544333
No 263
>2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus}
Probab=60.44 E-value=6.1 Score=35.88 Aligned_cols=70 Identities=16% Similarity=0.110 Sum_probs=43.0
Q ss_pred ccEEEEEeCC-hhHHHHHHHHHhcCCCcEEEEecCCCCCc----CCCCCccccCCCCCCHHHHHHHHHHc-----CCcEE
Q 010065 82 RVVVLVIGGG-GREHALCYALKRSHSCDAVFCAPGNAGIS----NSGDATCIPDLDVLDGDAVISFCRKW-----SVGLV 151 (519)
Q Consensus 82 ~~~vliiG~g-~~~~~l~~~l~~~~g~~~v~~~~~~~~~~----~~~~~~~v~~~d~~d~~~l~~~~~~~-----~id~V 151 (519)
+++++|+|++ +....++..|.+. |++++.++.+..... .......+ ..|..|.+.+.+++++. ++|++
T Consensus 5 ~k~vlVtGasggiG~~~a~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~-~~D~~~~~~~~~~~~~~~~~~~~id~l 82 (234)
T 2ehd_A 5 KGAVLITGASRGIGEATARLLHAK-GYRVGLMARDEKRLQALAAELEGALPL-PGDVREEGDWARAVAAMEEAFGELSAL 82 (234)
T ss_dssp CCEEEESSTTSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHSTTCEEE-ECCTTCHHHHHHHHHHHHHHHSCCCEE
T ss_pred CCEEEEECCCcHHHHHHHHHHHHC-CCEEEEEECCHHHHHHHHHHhhhceEE-EecCCCHHHHHHHHHHHHHHcCCCCEE
Confidence 3579999866 3456788888877 888777654311100 00011223 56788877766655532 78999
Q ss_pred EE
Q 010065 152 VV 153 (519)
Q Consensus 152 i~ 153 (519)
+.
T Consensus 83 i~ 84 (234)
T 2ehd_A 83 VN 84 (234)
T ss_dssp EE
T ss_pred EE
Confidence 87
No 264
>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0
Probab=60.09 E-value=32 Score=32.03 Aligned_cols=33 Identities=30% Similarity=0.451 Sum_probs=25.4
Q ss_pred CccEEEEEeCC-hhHHHHHHHHHhcCCCcEEEEec
Q 010065 81 QRVVVLVIGGG-GREHALCYALKRSHSCDAVFCAP 114 (519)
Q Consensus 81 ~~~~vliiG~g-~~~~~l~~~l~~~~g~~~v~~~~ 114 (519)
+.+++||+|++ +....++..|.+. |.++++++.
T Consensus 9 ~gk~vlVTGas~gIG~~ia~~l~~~-G~~V~~~~~ 42 (287)
T 3pxx_A 9 QDKVVLVTGGARGQGRSHAVKLAEE-GADIILFDI 42 (287)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHT-TCEEEEEEC
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHC-CCeEEEEcc
Confidence 35789999976 4556788899887 998887754
No 265
>3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2
Probab=60.00 E-value=12 Score=34.65 Aligned_cols=71 Identities=18% Similarity=0.154 Sum_probs=43.9
Q ss_pred CccEEEEEeCC---hhHHHHHHHHHhcCCCcEEEEecCCCCCc-------CCCCCccccCCCCCCHHHHHHHHHHc----
Q 010065 81 QRVVVLVIGGG---GREHALCYALKRSHSCDAVFCAPGNAGIS-------NSGDATCIPDLDVLDGDAVISFCRKW---- 146 (519)
Q Consensus 81 ~~~~vliiG~g---~~~~~l~~~l~~~~g~~~v~~~~~~~~~~-------~~~~~~~v~~~d~~d~~~l~~~~~~~---- 146 (519)
+.++++|+|++ +....++..|.+. |.++++++.+..... .......+ ..|..|.+.+.+++++.
T Consensus 13 ~~k~vlITGa~~~~giG~~ia~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~-~~Dv~~~~~v~~~~~~~~~~~ 90 (271)
T 3ek2_A 13 DGKRILLTGLLSNRSIAYGIAKACKRE-GAELAFTYVGDRFKDRITEFAAEFGSELVF-PCDVADDAQIDALFASLKTHW 90 (271)
T ss_dssp TTCEEEECCCCSTTSHHHHHHHHHHHT-TCEEEEEESSGGGHHHHHHHHHHTTCCCEE-ECCTTCHHHHHHHHHHHHHHC
T ss_pred CCCEEEEeCCCCCCcHHHHHHHHHHHc-CCCEEEEecchhhHHHHHHHHHHcCCcEEE-ECCCCCHHHHHHHHHHHHHHc
Confidence 46889999964 5667789999887 888877653311000 00011222 56777777666665543
Q ss_pred -CCcEEEE
Q 010065 147 -SVGLVVV 153 (519)
Q Consensus 147 -~id~Vi~ 153 (519)
++|++|.
T Consensus 91 g~id~lv~ 98 (271)
T 3ek2_A 91 DSLDGLVH 98 (271)
T ss_dssp SCEEEEEE
T ss_pred CCCCEEEE
Confidence 6888886
No 266
>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2
Probab=59.95 E-value=8.6 Score=35.23 Aligned_cols=70 Identities=21% Similarity=0.265 Sum_probs=44.1
Q ss_pred ccEEEEEeCC-hhHHHHHHHHHhcCCCcEEEEecCCCCCcC--------CCCCccccCCCCCCHHHHHHHHHHc-----C
Q 010065 82 RVVVLVIGGG-GREHALCYALKRSHSCDAVFCAPGNAGISN--------SGDATCIPDLDVLDGDAVISFCRKW-----S 147 (519)
Q Consensus 82 ~~~vliiG~g-~~~~~l~~~l~~~~g~~~v~~~~~~~~~~~--------~~~~~~v~~~d~~d~~~l~~~~~~~-----~ 147 (519)
.++++|+|++ +....+++.|.+. |.+++.++.+...... ......+ ..|..|.+.+.+++++. +
T Consensus 5 ~k~vlITGas~gIG~~~a~~l~~~-G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~-~~D~~~~~~~~~~~~~~~~~~~~ 82 (247)
T 3lyl_A 5 EKVALVTGASRGIGFEVAHALASK-GATVVGTATSQASAEKFENSMKEKGFKARGL-VLNISDIESIQNFFAEIKAENLA 82 (247)
T ss_dssp TCEEEESSCSSHHHHHHHHHHHHT-TCEEEEEESSHHHHHHHHHHHHHTTCCEEEE-ECCTTCHHHHHHHHHHHHHTTCC
T ss_pred CCEEEEECCCChHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHHHhcCCceEEE-EecCCCHHHHHHHHHHHHHHcCC
Confidence 4688999866 4556788888887 8888777543111000 0011222 56888877777666543 6
Q ss_pred CcEEEE
Q 010065 148 VGLVVV 153 (519)
Q Consensus 148 id~Vi~ 153 (519)
+|.++.
T Consensus 83 id~li~ 88 (247)
T 3lyl_A 83 IDILVN 88 (247)
T ss_dssp CSEEEE
T ss_pred CCEEEE
Confidence 899987
No 267
>1z45_A GAL10 bifunctional protein; epimerase, mutarotase, metabolism, isomerase; HET: GAL NAD GUD; 1.85A {Saccharomyces cerevisiae} SCOP: b.30.5.4 c.2.1.2
Probab=59.87 E-value=23 Score=38.16 Aligned_cols=71 Identities=15% Similarity=0.205 Sum_probs=46.7
Q ss_pred CccEEEEEeCC-hhHHHHHHHHHhcCCCcEEEEecCCCCCc----C-----CCCCccccCCCCCCHHHHHHHHHHcCCcE
Q 010065 81 QRVVVLVIGGG-GREHALCYALKRSHSCDAVFCAPGNAGIS----N-----SGDATCIPDLDVLDGDAVISFCRKWSVGL 150 (519)
Q Consensus 81 ~~~~vliiG~g-~~~~~l~~~l~~~~g~~~v~~~~~~~~~~----~-----~~~~~~v~~~d~~d~~~l~~~~~~~~id~ 150 (519)
.+++|||+|+. .....++..|.+. |++++.++....... . ......+ ..|..|.+.+.+++++.++|+
T Consensus 10 ~~~~ilVTGatG~IG~~l~~~L~~~-G~~V~~~~r~~~~~~~~~~~l~~~~~~~v~~v-~~Dl~d~~~l~~~~~~~~~D~ 87 (699)
T 1z45_A 10 TSKIVLVTGGAGYIGSHTVVELIEN-GYDCVVADNLSNSTYDSVARLEVLTKHHIPFY-EVDLCDRKGLEKVFKEYKIDS 87 (699)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHHT-TCEEEEEECCSSCCTHHHHHHHHHHTSCCCEE-ECCTTCHHHHHHHHHHSCCCE
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHC-cCEEEEEECCCcchHHHHHHHhhccCCceEEE-EcCCCCHHHHHHHHHhCCCCE
Confidence 35789999965 4556788888877 888877754321110 0 0111223 568888888888887778999
Q ss_pred EEE
Q 010065 151 VVV 153 (519)
Q Consensus 151 Vi~ 153 (519)
||-
T Consensus 88 Vih 90 (699)
T 1z45_A 88 VIH 90 (699)
T ss_dssp EEE
T ss_pred EEE
Confidence 997
No 268
>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str}
Probab=59.87 E-value=15 Score=34.07 Aligned_cols=71 Identities=17% Similarity=0.180 Sum_probs=44.0
Q ss_pred CccEEEEEeCC-hhHHHHHHHHHhcCCCcEEEEecCCCCC-c-------C-CCCCccccCCCCCCHHHHHHHHHHc----
Q 010065 81 QRVVVLVIGGG-GREHALCYALKRSHSCDAVFCAPGNAGI-S-------N-SGDATCIPDLDVLDGDAVISFCRKW---- 146 (519)
Q Consensus 81 ~~~~vliiG~g-~~~~~l~~~l~~~~g~~~v~~~~~~~~~-~-------~-~~~~~~v~~~d~~d~~~l~~~~~~~---- 146 (519)
+.++++|+|++ +....+++.|.+. |.+++++...+... . . ......+ ..|..|.+.+.+++++.
T Consensus 7 ~~k~vlVTGas~GIG~aia~~la~~-G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~Dv~~~~~v~~~~~~~~~~~ 84 (259)
T 3edm_A 7 TNRTIVVAGAGRDIGRACAIRFAQE-GANVVLTYNGAAEGAATAVAEIEKLGRSALAI-KADLTNAAEVEAAISAAADKF 84 (259)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHT-TCEEEEEECSSCHHHHHHHHHHHTTTSCCEEE-ECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCchHHHHHHHHHHHC-CCEEEEEcCCCHHHHHHHHHHHHhcCCceEEE-EcCCCCHHHHHHHHHHHHHHh
Confidence 35789999976 4556788999887 89887763322110 0 0 0111223 56888877766665542
Q ss_pred -CCcEEEE
Q 010065 147 -SVGLVVV 153 (519)
Q Consensus 147 -~id~Vi~ 153 (519)
++|+++.
T Consensus 85 g~id~lv~ 92 (259)
T 3edm_A 85 GEIHGLVH 92 (259)
T ss_dssp CSEEEEEE
T ss_pred CCCCEEEE
Confidence 6888886
No 269
>3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} SCOP: c.2.1.0
Probab=59.78 E-value=25 Score=32.85 Aligned_cols=33 Identities=24% Similarity=0.469 Sum_probs=25.3
Q ss_pred CccEEEEEeCC-hhHHHHHHHHHhcCCCcEEEEec
Q 010065 81 QRVVVLVIGGG-GREHALCYALKRSHSCDAVFCAP 114 (519)
Q Consensus 81 ~~~~vliiG~g-~~~~~l~~~l~~~~g~~~v~~~~ 114 (519)
+.++++|+|++ +....+++.|.+. |.++++++.
T Consensus 9 ~~k~~lVTGas~gIG~a~a~~l~~~-G~~V~~~~r 42 (281)
T 3s55_A 9 EGKTALITGGARGMGRSHAVALAEA-GADIAICDR 42 (281)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHT-TCEEEEEEC
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHC-CCeEEEEeC
Confidence 35789999966 4566788999887 898877764
No 270
>2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A*
Probab=59.63 E-value=8 Score=36.09 Aligned_cols=71 Identities=14% Similarity=0.181 Sum_probs=44.4
Q ss_pred CccEEEEEeCC-hhHHHHHHHHHhcCCCcEEEEecCCCCCcC----C---CCCccccCCCCCCHHHHHHHHHHc-----C
Q 010065 81 QRVVVLVIGGG-GREHALCYALKRSHSCDAVFCAPGNAGISN----S---GDATCIPDLDVLDGDAVISFCRKW-----S 147 (519)
Q Consensus 81 ~~~~vliiG~g-~~~~~l~~~l~~~~g~~~v~~~~~~~~~~~----~---~~~~~v~~~d~~d~~~l~~~~~~~-----~ 147 (519)
+.++++|+|++ +....++..|.+. |++++.++.+...... . .....+ ..|..|.+.+.+++++. +
T Consensus 15 ~~k~vlITGasggiG~~~a~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~-~~D~~~~~~~~~~~~~~~~~~~~ 92 (278)
T 2bgk_A 15 QDKVAIITGGAGGIGETTAKLFVRY-GAKVVIADIADDHGQKVCNNIGSPDVISFV-HCDVTKDEDVRNLVDTTIAKHGK 92 (278)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHCCTTTEEEE-ECCTTCHHHHHHHHHHHHHHHSC
T ss_pred cCCEEEEECCCCHHHHHHHHHHHHC-CCEEEEEcCChhHHHHHHHHhCCCCceEEE-ECCCCCHHHHHHHHHHHHHHcCC
Confidence 45789999976 4556788888877 8888776533110000 0 011223 56888877777666542 7
Q ss_pred CcEEEE
Q 010065 148 VGLVVV 153 (519)
Q Consensus 148 id~Vi~ 153 (519)
+|.+|.
T Consensus 93 id~li~ 98 (278)
T 2bgk_A 93 LDIMFG 98 (278)
T ss_dssp CCEEEE
T ss_pred CCEEEE
Confidence 999986
No 271
>1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2
Probab=59.44 E-value=7.1 Score=35.62 Aligned_cols=71 Identities=24% Similarity=0.209 Sum_probs=46.0
Q ss_pred CccEEEEEeCC-hhHHHHHHHHHhcCCCcEEEEecCCCCCcC----CCCCccccCCCCCCHHHHHHHHHHc-CCcEEEE
Q 010065 81 QRVVVLVIGGG-GREHALCYALKRSHSCDAVFCAPGNAGISN----SGDATCIPDLDVLDGDAVISFCRKW-SVGLVVV 153 (519)
Q Consensus 81 ~~~~vliiG~g-~~~~~l~~~l~~~~g~~~v~~~~~~~~~~~----~~~~~~v~~~d~~d~~~l~~~~~~~-~id~Vi~ 153 (519)
+.++++|+|++ +....++..|.+. |++++.++.+...... ......+ ..|..|.+.+.+++++. ++|+|+.
T Consensus 6 ~~~~vlVTGasggiG~~~a~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~-~~D~~~~~~~~~~~~~~~~id~vi~ 82 (244)
T 1cyd_A 6 SGLRALVTGAGKGIGRDTVKALHAS-GAKVVAVTRTNSDLVSLAKECPGIEPV-CVDLGDWDATEKALGGIGPVDLLVN 82 (244)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHSTTCEEE-ECCTTCHHHHHHHHTTCCCCSEEEE
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHhccCCCcE-EecCCCHHHHHHHHHHcCCCCEEEE
Confidence 34789999975 4566788888877 8888776543111000 0111223 56888888888877654 5899987
No 272
>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A*
Probab=59.32 E-value=6.8 Score=35.62 Aligned_cols=70 Identities=24% Similarity=0.315 Sum_probs=42.9
Q ss_pred ccEEEEEeCC-hhHHHHHHHHHhcCCCcEEEEecCCCCCc--------C-CCCCccccCCCCCCHHHHHHHHHHc-----
Q 010065 82 RVVVLVIGGG-GREHALCYALKRSHSCDAVFCAPGNAGIS--------N-SGDATCIPDLDVLDGDAVISFCRKW----- 146 (519)
Q Consensus 82 ~~~vliiG~g-~~~~~l~~~l~~~~g~~~v~~~~~~~~~~--------~-~~~~~~v~~~d~~d~~~l~~~~~~~----- 146 (519)
+++++|+|++ +....+++.|.+. |+++++++.+..... . ......+ ..|..|.+.+.+++++.
T Consensus 2 ~k~vlITGas~gIG~~ia~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~-~~D~~~~~~v~~~~~~~~~~~g 79 (235)
T 3l77_A 2 MKVAVITGASRGIGEAIARALARD-GYALALGARSVDRLEKIAHELMQEQGVEVFYH-HLDVSKAESVEEFSKKVLERFG 79 (235)
T ss_dssp CCEEEEESCSSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHHHHCCCEEEE-ECCTTCHHHHHHHCC-HHHHHS
T ss_pred CCEEEEECCCcHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHHHhhcCCeEEEE-EeccCCHHHHHHHHHHHHHhcC
Confidence 4678999976 4566788888887 888777654311000 0 0011122 56888877776665432
Q ss_pred CCcEEEE
Q 010065 147 SVGLVVV 153 (519)
Q Consensus 147 ~id~Vi~ 153 (519)
++|.++.
T Consensus 80 ~id~li~ 86 (235)
T 3l77_A 80 DVDVVVA 86 (235)
T ss_dssp SCSEEEE
T ss_pred CCCEEEE
Confidence 7999887
No 273
>4f3y_A DHPR, dihydrodipicolinate reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Burkholderia thailandensis}
Probab=59.21 E-value=44 Score=31.38 Aligned_cols=87 Identities=9% Similarity=-0.018 Sum_probs=48.9
Q ss_pred ccEEEEEe-CChhHHHHHHHHHhcCCCcEEEEecCC-CCCcCCCC------CccccCCCCCCHHHHHHHHHHcCCcEEEE
Q 010065 82 RVVVLVIG-GGGREHALCYALKRSHSCDAVFCAPGN-AGISNSGD------ATCIPDLDVLDGDAVISFCRKWSVGLVVV 153 (519)
Q Consensus 82 ~~~vliiG-~g~~~~~l~~~l~~~~g~~~v~~~~~~-~~~~~~~~------~~~v~~~d~~d~~~l~~~~~~~~id~Vi~ 153 (519)
++||.|+| .|.....+++.+.+..+++.+.+...+ ......+. ...+ .-..|.+.+++ ++|+|+-
T Consensus 7 mikV~V~Ga~G~MG~~i~~~l~~~~~~eLv~~~d~~~~~~~G~d~gel~g~~~gv--~v~~dl~~ll~-----~~DVVID 79 (272)
T 4f3y_A 7 SMKIAIAGASGRMGRMLIEAVLAAPDATLVGALDRTGSPQLGQDAGAFLGKQTGV--ALTDDIERVCA-----EADYLID 79 (272)
T ss_dssp CEEEEESSTTSHHHHHHHHHHHHCTTEEEEEEBCCTTCTTTTSBTTTTTTCCCSC--BCBCCHHHHHH-----HCSEEEE
T ss_pred ccEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEEecCcccccccHHHHhCCCCCc--eecCCHHHHhc-----CCCEEEE
Confidence 58999999 565556678888777777776643222 11000000 0011 11345666543 4798887
Q ss_pred CCChhhHHHHHHHHHHCCCCee
Q 010065 154 GPEAPLVSGLANKLVKAGIPTF 175 (519)
Q Consensus 154 g~E~~~~~~~a~~le~~gip~~ 175 (519)
..-..........+.+.|+|++
T Consensus 80 fT~p~a~~~~~~~al~~G~~vV 101 (272)
T 4f3y_A 80 FTLPEGTLVHLDAALRHDVKLV 101 (272)
T ss_dssp CSCHHHHHHHHHHHHHHTCEEE
T ss_pred cCCHHHHHHHHHHHHHcCCCEE
Confidence 4433333345666777899875
No 274
>3uce_A Dehydrogenase; rossmann fold, oxidoreductase; HET: NDP; 1.80A {Vibrio vulnificus}
Probab=59.13 E-value=13 Score=33.51 Aligned_cols=58 Identities=21% Similarity=0.332 Sum_probs=41.0
Q ss_pred ccEEEEEeCC-hhHHHHHHHHHhcCCCcEEEEecCCCCCcCCCCCccccCCCCCCHHHHHHHHHHc-CCcEEEE
Q 010065 82 RVVVLVIGGG-GREHALCYALKRSHSCDAVFCAPGNAGISNSGDATCIPDLDVLDGDAVISFCRKW-SVGLVVV 153 (519)
Q Consensus 82 ~~~vliiG~g-~~~~~l~~~l~~~~g~~~v~~~~~~~~~~~~~~~~~v~~~d~~d~~~l~~~~~~~-~id~Vi~ 153 (519)
.++++|+|++ +....+++.|.+. |.+++.++.+. ..|..|.+.+.+++++. ++|.++.
T Consensus 6 ~k~vlVTGas~gIG~~~a~~l~~~-G~~V~~~~r~~-------------~~D~~~~~~v~~~~~~~g~id~lv~ 65 (223)
T 3uce_A 6 KTVYVVLGGTSGIGAELAKQLESE-HTIVHVASRQT-------------GLDISDEKSVYHYFETIGAFDHLIV 65 (223)
T ss_dssp CEEEEEETTTSHHHHHHHHHHCST-TEEEEEESGGG-------------TCCTTCHHHHHHHHHHHCSEEEEEE
T ss_pred CCEEEEECCCCHHHHHHHHHHHHC-CCEEEEecCCc-------------ccCCCCHHHHHHHHHHhCCCCEEEE
Confidence 4688999976 4556788888766 88777653221 25777778887777764 6898887
No 275
>2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa}
Probab=59.07 E-value=8.7 Score=36.16 Aligned_cols=71 Identities=18% Similarity=0.330 Sum_probs=44.0
Q ss_pred CccEEEEEeCC-hhHHHHHHHHHhcCCCcEEEEecCCCCCc----C---CCCCccccCCCCCCHHHHHHHHHHc-----C
Q 010065 81 QRVVVLVIGGG-GREHALCYALKRSHSCDAVFCAPGNAGIS----N---SGDATCIPDLDVLDGDAVISFCRKW-----S 147 (519)
Q Consensus 81 ~~~~vliiG~g-~~~~~l~~~l~~~~g~~~v~~~~~~~~~~----~---~~~~~~v~~~d~~d~~~l~~~~~~~-----~ 147 (519)
+.++++|+|++ +....++..|.+. |.+++.++.+..... . ......+ ..|..|.+.+.+++++. +
T Consensus 28 ~~k~vlVTGas~gIG~aia~~L~~~-G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~-~~Dv~d~~~v~~~~~~~~~~~g~ 105 (276)
T 2b4q_A 28 AGRIALVTGGSRGIGQMIAQGLLEA-GARVFICARDAEACADTATRLSAYGDCQAI-PADLSSEAGARRLAQALGELSAR 105 (276)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHT-TCEEEEECSCHHHHHHHHHHHTTSSCEEEC-CCCTTSHHHHHHHHHHHHHHCSC
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHHHhcCceEEE-EeeCCCHHHHHHHHHHHHHhcCC
Confidence 34689999976 4566788888887 888777653311000 0 0011223 56888877776665542 6
Q ss_pred CcEEEE
Q 010065 148 VGLVVV 153 (519)
Q Consensus 148 id~Vi~ 153 (519)
+|++|.
T Consensus 106 iD~lvn 111 (276)
T 2b4q_A 106 LDILVN 111 (276)
T ss_dssp CSEEEE
T ss_pred CCEEEE
Confidence 999997
No 276
>1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain dehydrogenase, ketone BODY, beta hydroxybutyrate, oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi} SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A* 2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A*
Probab=59.06 E-value=12 Score=34.63 Aligned_cols=70 Identities=23% Similarity=0.280 Sum_probs=43.4
Q ss_pred ccEEEEEeCC-hhHHHHHHHHHhcCCCcEEEEecCCCC-CcC---------CCCCccccCCCCCCHHHHHHHHHH-----
Q 010065 82 RVVVLVIGGG-GREHALCYALKRSHSCDAVFCAPGNAG-ISN---------SGDATCIPDLDVLDGDAVISFCRK----- 145 (519)
Q Consensus 82 ~~~vliiG~g-~~~~~l~~~l~~~~g~~~v~~~~~~~~-~~~---------~~~~~~v~~~d~~d~~~l~~~~~~----- 145 (519)
.++++|+|++ +....++..|.+. |.+++.++.+... ... -.....+ ..|..|.+.+.+++++
T Consensus 4 ~k~vlVTGas~gIG~~ia~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~-~~D~~~~~~v~~~~~~~~~~~ 81 (260)
T 1x1t_A 4 GKVAVVTGSTSGIGLGIATALAAQ-GADIVLNGFGDAAEIEKVRAGLAAQHGVKVLYD-GADLSKGEAVRGLVDNAVRQM 81 (260)
T ss_dssp TCEEEETTCSSHHHHHHHHHHHHT-TCEEEEECCSCHHHHHHHHHHHHHHHTSCEEEE-CCCTTSHHHHHHHHHHHHHHH
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHc-CCEEEEEeCCcchHHHHHHHHHHhccCCcEEEE-ECCCCCHHHHHHHHHHHHHhc
Confidence 4678999866 4566788888887 8887776533211 100 0011222 5688887776666553
Q ss_pred cCCcEEEE
Q 010065 146 WSVGLVVV 153 (519)
Q Consensus 146 ~~id~Vi~ 153 (519)
.++|++|.
T Consensus 82 g~iD~lv~ 89 (260)
T 1x1t_A 82 GRIDILVN 89 (260)
T ss_dssp SCCSEEEE
T ss_pred CCCCEEEE
Confidence 26999987
No 277
>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti}
Probab=59.01 E-value=14 Score=34.54 Aligned_cols=71 Identities=21% Similarity=0.240 Sum_probs=43.8
Q ss_pred CccEEEEEeCC-hhHHHHHHHHHhcCCCcEEEEecCCCCC-cC--------CCCCccccCCCCCCHHHHHHHHHHc----
Q 010065 81 QRVVVLVIGGG-GREHALCYALKRSHSCDAVFCAPGNAGI-SN--------SGDATCIPDLDVLDGDAVISFCRKW---- 146 (519)
Q Consensus 81 ~~~~vliiG~g-~~~~~l~~~l~~~~g~~~v~~~~~~~~~-~~--------~~~~~~v~~~d~~d~~~l~~~~~~~---- 146 (519)
..++++|+|++ +....+++.|.+. |.++++++..+... .. -.....+ ..|..|.+.+.+++++.
T Consensus 30 ~gk~~lVTGas~GIG~aia~~la~~-G~~V~~~~~~~~~~~~~~~~~l~~~~~~~~~~-~~Dv~d~~~v~~~~~~~~~~~ 107 (271)
T 3v2g_A 30 AGKTAFVTGGSRGIGAAIAKRLALE-GAAVALTYVNAAERAQAVVSEIEQAGGRAVAI-RADNRDAEAIEQAIRETVEAL 107 (271)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHT-TCEEEEEESSCHHHHHHHHHHHHHTTCCEEEE-ECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHC-CCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEE-ECCCCCHHHHHHHHHHHHHHc
Confidence 34789999976 4566788888887 88887764332110 00 0011122 56778877766665542
Q ss_pred -CCcEEEE
Q 010065 147 -SVGLVVV 153 (519)
Q Consensus 147 -~id~Vi~ 153 (519)
++|+++.
T Consensus 108 g~iD~lvn 115 (271)
T 3v2g_A 108 GGLDILVN 115 (271)
T ss_dssp SCCCEEEE
T ss_pred CCCcEEEE
Confidence 7898887
No 278
>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str}
Probab=58.98 E-value=6.9 Score=36.35 Aligned_cols=71 Identities=14% Similarity=0.347 Sum_probs=44.4
Q ss_pred CccEEEEEeCC-hhHHHHHHHHHhcCCCcEEEEecCCCCCc-------CC-CCCccccCCCCCCHHHHHHHHHHc-----
Q 010065 81 QRVVVLVIGGG-GREHALCYALKRSHSCDAVFCAPGNAGIS-------NS-GDATCIPDLDVLDGDAVISFCRKW----- 146 (519)
Q Consensus 81 ~~~~vliiG~g-~~~~~l~~~l~~~~g~~~v~~~~~~~~~~-------~~-~~~~~v~~~d~~d~~~l~~~~~~~----- 146 (519)
+.++++|+|++ +....+++.|.+. |.++++++.+..... .. .....+ ..|..|.+.+.+++++.
T Consensus 5 ~~k~vlVTGas~gIG~aia~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~-~~Dv~~~~~v~~~~~~~~~~~g 82 (257)
T 3imf_A 5 KEKVVIITGGSSGMGKGMATRFAKE-GARVVITGRTKEKLEEAKLEIEQFPGQILTV-QMDVRNTDDIQKMIEQIDEKFG 82 (257)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHCCSTTCEEEE-ECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHHHhcCCcEEEE-EccCCCHHHHHHHHHHHHHHcC
Confidence 35788999865 4566788888887 888877654311100 00 011222 56888877776665543
Q ss_pred CCcEEEE
Q 010065 147 SVGLVVV 153 (519)
Q Consensus 147 ~id~Vi~ 153 (519)
++|+++.
T Consensus 83 ~id~lv~ 89 (257)
T 3imf_A 83 RIDILIN 89 (257)
T ss_dssp CCCEEEE
T ss_pred CCCEEEE
Confidence 7999987
No 279
>3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} SCOP: c.2.1.0 PDB: 3uwr_A*
Probab=58.86 E-value=34 Score=31.97 Aligned_cols=34 Identities=18% Similarity=0.264 Sum_probs=26.0
Q ss_pred CccEEEEEeCC-hhHHHHHHHHHhcCCCcEEEEecC
Q 010065 81 QRVVVLVIGGG-GREHALCYALKRSHSCDAVFCAPG 115 (519)
Q Consensus 81 ~~~~vliiG~g-~~~~~l~~~l~~~~g~~~v~~~~~ 115 (519)
+.++++|+|++ +....+++.|.+. |.+++.++.+
T Consensus 10 ~~k~~lVTGas~gIG~aia~~la~~-G~~V~~~~~~ 44 (286)
T 3uve_A 10 EGKVAFVTGAARGQGRSHAVRLAQE-GADIIAVDIC 44 (286)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHT-TCEEEEEECC
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHC-CCeEEEEecc
Confidence 45789999976 4566788999887 9988877543
No 280
>4gx0_A TRKA domain protein; membrane protein, ION channel, ADP binding, NAD binding, MEM transport protein; HET: MAL GLC; 2.60A {Geobacter sulfurreducens} PDB: 4gx1_A* 4gx2_A* 4gx5_A 4gvl_A*
Probab=58.85 E-value=32 Score=35.99 Aligned_cols=109 Identities=12% Similarity=0.028 Sum_probs=64.0
Q ss_pred cEEEEEeCChhHHHHHHHHHhcCCCcEEEEecCCCCCcCCCCCccccCCCCCCHHHHHHHHHHcCCcEEEEC-CChhhHH
Q 010065 83 VVVLVIGGGGREHALCYALKRSHSCDAVFCAPGNAGISNSGDATCIPDLDVLDGDAVISFCRKWSVGLVVVG-PEAPLVS 161 (519)
Q Consensus 83 ~~vliiG~g~~~~~l~~~l~~~~g~~~v~~~~~~~~~~~~~~~~~v~~~d~~d~~~l~~~~~~~~id~Vi~g-~E~~~~~ 161 (519)
++++|+|.|.....+++.|.+. |+++++++.+........ ..+ ..|..|.+.|.+ +.-.+.|.++.. ++|....
T Consensus 349 ~~viIiG~G~~G~~la~~L~~~-g~~v~vid~d~~~~~~~~--~~i-~gD~t~~~~L~~-agi~~ad~vi~~~~~d~~ni 423 (565)
T 4gx0_A 349 ELIFIIGHGRIGCAAAAFLDRK-PVPFILIDRQESPVCNDH--VVV-YGDATVGQTLRQ-AGIDRASGIIVTTNDDSTNI 423 (565)
T ss_dssp CCEEEECCSHHHHHHHHHHHHT-TCCEEEEESSCCSSCCSS--CEE-ESCSSSSTHHHH-HTTTSCSEEEECCSCHHHHH
T ss_pred CCEEEECCCHHHHHHHHHHHHC-CCCEEEEECChHHHhhcC--CEE-EeCCCCHHHHHh-cCccccCEEEEECCCchHHH
Confidence 7899999998777889999877 999999875532222211 223 567776555544 444578888883 4554432
Q ss_pred HHHHHHHHCCCCeeCCcHHHHHHhcCHHHHHHHHHHcCCCC
Q 010065 162 GLANKLVKAGIPTFGPSSEAAALEGSKNFMKNLCDKYGIPT 202 (519)
Q Consensus 162 ~~a~~le~~gip~~g~~~~~~~~~~dK~~~k~~l~~~Gi~~ 202 (519)
-++..+.++|.+ ...+....|... .+.++++|+..
T Consensus 424 ~~~~~ak~l~~~-----~~iiar~~~~~~-~~~l~~~G~d~ 458 (565)
T 4gx0_A 424 FLTLACRHLHSH-----IRIVARANGEEN-VDQLYAAGADF 458 (565)
T ss_dssp HHHHHHHHHCSS-----SEEEEEESSTTS-HHHHHHHTCSE
T ss_pred HHHHHHHHHCCC-----CEEEEEECCHHH-HHHHHHcCCCE
Confidence 334445566543 111222333332 34466777763
No 281
>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis}
Probab=58.84 E-value=7.6 Score=36.65 Aligned_cols=71 Identities=21% Similarity=0.314 Sum_probs=44.5
Q ss_pred CccEEEEEeCC-hhHHHHHHHHHhcCCCcEEEEecCCCCCcC-----CCCCccccCCCCCCHHHHHHHHHHc-----CCc
Q 010065 81 QRVVVLVIGGG-GREHALCYALKRSHSCDAVFCAPGNAGISN-----SGDATCIPDLDVLDGDAVISFCRKW-----SVG 149 (519)
Q Consensus 81 ~~~~vliiG~g-~~~~~l~~~l~~~~g~~~v~~~~~~~~~~~-----~~~~~~v~~~d~~d~~~l~~~~~~~-----~id 149 (519)
+.++++|+|++ +....++..|.+. |.+++.++.+...... ......+ ..|..|.+.+.+++++. ++|
T Consensus 28 ~gk~vlVTGas~gIG~aia~~la~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~-~~Dv~d~~~v~~~~~~~~~~~g~iD 105 (277)
T 3gvc_A 28 AGKVAIVTGAGAGIGLAVARRLADE-GCHVLCADIDGDAADAAATKIGCGAAAC-RVDVSDEQQIIAMVDACVAAFGGVD 105 (277)
T ss_dssp TTCEEEETTTTSTHHHHHHHHHHHT-TCEEEEEESSHHHHHHHHHHHCSSCEEE-ECCTTCHHHHHHHHHHHHHHHSSCC
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHcCCcceEE-EecCCCHHHHHHHHHHHHHHcCCCC
Confidence 34678888865 4556788999887 8988877543111000 0111223 56888877776665543 799
Q ss_pred EEEE
Q 010065 150 LVVV 153 (519)
Q Consensus 150 ~Vi~ 153 (519)
+++.
T Consensus 106 ~lvn 109 (277)
T 3gvc_A 106 KLVA 109 (277)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 9987
No 282
>1i24_A Sulfolipid biosynthesis protein SQD1; SDR, short-chain dehydrogenase/reductase, rossmann fold, BIO protein; HET: NAD UPG; 1.20A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1i2c_A* 1i2b_A* 1qrr_A*
Probab=58.58 E-value=10 Score=37.46 Aligned_cols=71 Identities=17% Similarity=0.166 Sum_probs=45.2
Q ss_pred CccEEEEEeCCh-hHHHHHHHHHhcCCCcEEEEecCCCCC----------c---------------CCCCCccccCCCCC
Q 010065 81 QRVVVLVIGGGG-REHALCYALKRSHSCDAVFCAPGNAGI----------S---------------NSGDATCIPDLDVL 134 (519)
Q Consensus 81 ~~~~vliiG~g~-~~~~l~~~l~~~~g~~~v~~~~~~~~~----------~---------------~~~~~~~v~~~d~~ 134 (519)
+.++|||+|+.| ....++..|.+. |++++.++...... . .......+ ..|..
T Consensus 10 ~~~~vlVTG~tGfIG~~l~~~L~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~v~~~-~~Dl~ 87 (404)
T 1i24_A 10 HGSRVMVIGGDGYCGWATALHLSKK-NYEVCIVDNLVRRLFDHQLGLESLTPIASIHDRISRWKALTGKSIELY-VGDIC 87 (404)
T ss_dssp --CEEEEETTTSHHHHHHHHHHHHT-TCEEEEEECCHHHHHHHHHTCCCSSCCCCHHHHHHHHHHHHCCCCEEE-ESCTT
T ss_pred CCCeEEEeCCCcHHHHHHHHHHHhC-CCeEEEEEecCccccccccccccccccchhhhhhhhHhhccCCceEEE-ECCCC
Confidence 357899999775 456678888877 88888775321000 0 00011223 46788
Q ss_pred CHHHHHHHHHHcCCcEEEE
Q 010065 135 DGDAVISFCRKWSVGLVVV 153 (519)
Q Consensus 135 d~~~l~~~~~~~~id~Vi~ 153 (519)
|.+.+.++++..++|+||-
T Consensus 88 d~~~~~~~~~~~~~D~Vih 106 (404)
T 1i24_A 88 DFEFLAESFKSFEPDSVVH 106 (404)
T ss_dssp SHHHHHHHHHHHCCSEEEE
T ss_pred CHHHHHHHHhccCCCEEEE
Confidence 8888888887778999987
No 283
>2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP} SCOP: c.2.1.2 PDB: 2ewm_A*
Probab=58.53 E-value=15 Score=33.73 Aligned_cols=70 Identities=14% Similarity=0.191 Sum_probs=43.5
Q ss_pred ccEEEEEeCC-hhHHHHHHHHHhcCCCcEEEEecCC-CCCc-C----CCCCccccCCCCCCHHHHHHHHHH-----cCCc
Q 010065 82 RVVVLVIGGG-GREHALCYALKRSHSCDAVFCAPGN-AGIS-N----SGDATCIPDLDVLDGDAVISFCRK-----WSVG 149 (519)
Q Consensus 82 ~~~vliiG~g-~~~~~l~~~l~~~~g~~~v~~~~~~-~~~~-~----~~~~~~v~~~d~~d~~~l~~~~~~-----~~id 149 (519)
.++++|+|++ +....++..|.+. |++++.++.+. .... . ......+ ..|..|.+.+.+++++ .++|
T Consensus 7 ~k~vlVTGas~gIG~~ia~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~-~~Dv~~~~~v~~~~~~~~~~~g~id 84 (249)
T 2ew8_A 7 DKLAVITGGANGIGRAIAERFAVE-GADIAIADLVPAPEAEAAIRNLGRRVLTV-KCDVSQPGDVEAFGKQVISTFGRCD 84 (249)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHT-TCEEEEEESSCCHHHHHHHHHTTCCEEEE-ECCTTCHHHHHHHHHHHHHHHSCCC
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHC-CCEEEEEcCCchhHHHHHHHhcCCcEEEE-EeecCCHHHHHHHHHHHHHHcCCCC
Confidence 4689999966 4556788888887 88887765432 1100 0 0011222 5688887776666543 3799
Q ss_pred EEEE
Q 010065 150 LVVV 153 (519)
Q Consensus 150 ~Vi~ 153 (519)
+++.
T Consensus 85 ~lv~ 88 (249)
T 2ew8_A 85 ILVN 88 (249)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 9987
No 284
>3e82_A Putative oxidoreductase; NAD, GFO/IDH/MOCA family, PSI-2, NYSGXRC, 11136F, structural genomics, protein structure initiative; 2.04A {Klebsiella pneumoniae subsp}
Probab=58.51 E-value=4.3 Score=40.13 Aligned_cols=142 Identities=14% Similarity=0.090 Sum_probs=71.6
Q ss_pred CccEEEEEeCChhHHH-HHHHHHhcCCCcEEEEecCCCCCcCCCCCccccCCCCCCHHHHHHHHHHcCCcEEEECCChhh
Q 010065 81 QRVVVLVIGGGGREHA-LCYALKRSHSCDAVFCAPGNAGISNSGDATCIPDLDVLDGDAVISFCRKWSVGLVVVGPEAPL 159 (519)
Q Consensus 81 ~~~~vliiG~g~~~~~-l~~~l~~~~g~~~v~~~~~~~~~~~~~~~~~v~~~d~~d~~~l~~~~~~~~id~Vi~g~E~~~ 159 (519)
++++|.|||.|..... .+..+++..+++++.+.+.++....... ... .-..|.+++ +...++|+|+...-...
T Consensus 6 ~~~rvgiiG~G~~g~~~~~~~l~~~~~~~l~av~d~~~~~~~~~~-~~~--~~~~~~~~l---l~~~~~D~V~i~tp~~~ 79 (364)
T 3e82_A 6 NTINIALIGYGFVGKTFHAPLIRSVPGLNLAFVASRDEEKVKRDL-PDV--TVIASPEAA---VQHPDVDLVVIASPNAT 79 (364)
T ss_dssp -CEEEEEECCSHHHHHTHHHHHHTSTTEEEEEEECSCHHHHHHHC-TTS--EEESCHHHH---HTCTTCSEEEECSCGGG
T ss_pred CcceEEEECCCHHHHHHHHHHHhhCCCeEEEEEEcCCHHHHHhhC-CCC--cEECCHHHH---hcCCCCCEEEEeCChHH
Confidence 4689999999964432 3455655557777655433321110000 000 012345554 44567999998654444
Q ss_pred HHHHHHHHHHCCCCeeCCcHHHHHHhcCHHHHHHHHHHcCCCCCCeee-cCC--HHHHHHHHH--HhCCCEEEEe
Q 010065 160 VSGLANKLVKAGIPTFGPSSEAAALEGSKNFMKNLCDKYGIPTAKYKT-FTD--PNAAKQYIQ--EEGAPIVVKA 229 (519)
Q Consensus 160 ~~~~a~~le~~gip~~g~~~~~~~~~~dK~~~k~~l~~~Gi~~p~~~~-v~~--~~~~~~~~~--~~g~P~VvKP 229 (519)
-..++..+-+.|.+++.-.|-+... .+=..+.+++++.|+..--... -.+ ...+.+.++ .+|-+..+.-
T Consensus 80 H~~~~~~al~aGk~Vl~EKPla~~~-~e~~~l~~~a~~~g~~~~v~~~~r~~p~~~~~~~~i~~g~iG~i~~~~~ 153 (364)
T 3e82_A 80 HAPLARLALNAGKHVVVDKPFTLDM-QEARELIALAEEKQRLLSVFHNRRWDSDYLGIRQVIEQGTLGAVKHFES 153 (364)
T ss_dssp HHHHHHHHHHTTCEEEECSCSCSSH-HHHHHHHHHHHHTTCCEEECCCCTTCHHHHHHHHHHHHTTTCSEEEEEE
T ss_pred HHHHHHHHHHCCCcEEEeCCCcCCH-HHHHHHHHHHHHhCCeEEEEeecccCHHHHHHHHHHHcCCCcceEEEEE
Confidence 3345555666788877433322211 1122455667788875421111 112 234555554 4666665553
No 285
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=58.30 E-value=30 Score=32.04 Aligned_cols=33 Identities=21% Similarity=0.377 Sum_probs=27.1
Q ss_pred ccEEEEEeCChhHHHHHHHHHhcCCCcEEEEecC
Q 010065 82 RVVVLVIGGGGREHALCYALKRSHSCDAVFCAPG 115 (519)
Q Consensus 82 ~~~vliiG~g~~~~~l~~~l~~~~g~~~v~~~~~ 115 (519)
+++|+|||+|......+..|++. |+++++++..
T Consensus 2 ~~~vvIIG~G~aGl~aA~~l~~~-g~~v~lie~~ 34 (297)
T 3fbs_A 2 KFDVIIIGGSYAGLSAALQLGRA-RKNILLVDAG 34 (297)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHT-TCCEEEEECC
T ss_pred CCCEEEECCCHHHHHHHHHHHhC-CCCEEEEeCC
Confidence 36899999997767778888877 8999888754
No 286
>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}
Probab=58.25 E-value=7 Score=36.38 Aligned_cols=70 Identities=21% Similarity=0.272 Sum_probs=43.7
Q ss_pred ccEEEEEeCC-hhHHHHHHHHHhcCCCcEEEEecCCCCCcC--------CCCCccccCCCCCCHHHHHHHHHH-----cC
Q 010065 82 RVVVLVIGGG-GREHALCYALKRSHSCDAVFCAPGNAGISN--------SGDATCIPDLDVLDGDAVISFCRK-----WS 147 (519)
Q Consensus 82 ~~~vliiG~g-~~~~~l~~~l~~~~g~~~v~~~~~~~~~~~--------~~~~~~v~~~d~~d~~~l~~~~~~-----~~ 147 (519)
.+++||+|++ +....++..|.+. |.++++++.+...... ......+ ..|..|.+.+.+++++ .+
T Consensus 29 ~k~vlITGas~gIG~~la~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~-~~D~~~~~~v~~~~~~~~~~~g~ 106 (262)
T 3rkr_A 29 GQVAVVTGASRGIGAAIARKLGSL-GARVVLTARDVEKLRAVEREIVAAGGEAESH-ACDLSHSDAIAAFATGVLAAHGR 106 (262)
T ss_dssp TCEEEESSTTSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHHTTCEEEEE-ECCTTCHHHHHHHHHHHHHHHSC
T ss_pred CCEEEEECCCChHHHHHHHHHHHC-CCEEEEEECCHHHHHHHHHHHHHhCCceeEE-EecCCCHHHHHHHHHHHHHhcCC
Confidence 4689999865 4566788888877 8888777543111000 0011122 5688887777666654 26
Q ss_pred CcEEEE
Q 010065 148 VGLVVV 153 (519)
Q Consensus 148 id~Vi~ 153 (519)
+|+++.
T Consensus 107 id~lv~ 112 (262)
T 3rkr_A 107 CDVLVN 112 (262)
T ss_dssp CSEEEE
T ss_pred CCEEEE
Confidence 999887
No 287
>1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2
Probab=58.24 E-value=18 Score=34.13 Aligned_cols=71 Identities=17% Similarity=0.260 Sum_probs=44.2
Q ss_pred CccEEEEEeCC-hhHHHHHHHHHhcCCCcEEEEecCCCCCc-------------CCCCCccccCCCCCCHHHHHHHHHH-
Q 010065 81 QRVVVLVIGGG-GREHALCYALKRSHSCDAVFCAPGNAGIS-------------NSGDATCIPDLDVLDGDAVISFCRK- 145 (519)
Q Consensus 81 ~~~~vliiG~g-~~~~~l~~~l~~~~g~~~v~~~~~~~~~~-------------~~~~~~~v~~~d~~d~~~l~~~~~~- 145 (519)
+.++++|+|++ +....++..|.+. |++++.++.+..... .......+ ..|..|.+.+.+++++
T Consensus 17 ~~k~vlVTGasggIG~~la~~l~~~-G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~-~~D~~~~~~v~~~~~~~ 94 (303)
T 1yxm_A 17 QGQVAIVTGGATGIGKAIVKELLEL-GSNVVIASRKLERLKSAADELQANLPPTKQARVIPI-QCNIRNEEEVNNLVKST 94 (303)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHHTSCTTCCCCEEEE-ECCTTCHHHHHHHHHHH
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHHHhhccccCCccEEEE-ecCCCCHHHHHHHHHHH
Confidence 35789999976 3556788888877 888777653311000 00011222 4688887777666654
Q ss_pred ----cCCcEEEE
Q 010065 146 ----WSVGLVVV 153 (519)
Q Consensus 146 ----~~id~Vi~ 153 (519)
.++|+||.
T Consensus 95 ~~~~g~id~li~ 106 (303)
T 1yxm_A 95 LDTFGKINFLVN 106 (303)
T ss_dssp HHHHSCCCEEEE
T ss_pred HHHcCCCCEEEE
Confidence 26999997
No 288
>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A*
Probab=58.21 E-value=18 Score=34.18 Aligned_cols=71 Identities=17% Similarity=0.239 Sum_probs=43.9
Q ss_pred CccEEEEEeCC-hhHHHHHHHHHhcCCCcEEEEecCCCCC-c-------CC-CCCccccCCCCCCHHHHHHHHHHc----
Q 010065 81 QRVVVLVIGGG-GREHALCYALKRSHSCDAVFCAPGNAGI-S-------NS-GDATCIPDLDVLDGDAVISFCRKW---- 146 (519)
Q Consensus 81 ~~~~vliiG~g-~~~~~l~~~l~~~~g~~~v~~~~~~~~~-~-------~~-~~~~~v~~~d~~d~~~l~~~~~~~---- 146 (519)
+.+++||+|++ +....+++.|.+. |.++++++.+.... . .. .....+ ..|..|.+.+.+++++.
T Consensus 46 ~gk~vlVTGas~GIG~aia~~la~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~-~~Dv~d~~~v~~~~~~~~~~~ 123 (291)
T 3ijr_A 46 KGKNVLITGGDSGIGRAVSIAFAKE-GANIAIAYLDEEGDANETKQYVEKEGVKCVLL-PGDLSDEQHCKDIVQETVRQL 123 (291)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHT-TCEEEEEESSCHHHHHHHHHHHHTTTCCEEEE-ESCTTSHHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHC-CCEEEEEeCCchHHHHHHHHHHHhcCCcEEEE-ECCCCCHHHHHHHHHHHHHHc
Confidence 45789999976 4556788888887 88887765432110 0 00 011122 46777877666655542
Q ss_pred -CCcEEEE
Q 010065 147 -SVGLVVV 153 (519)
Q Consensus 147 -~id~Vi~ 153 (519)
++|.++.
T Consensus 124 g~iD~lvn 131 (291)
T 3ijr_A 124 GSLNILVN 131 (291)
T ss_dssp SSCCEEEE
T ss_pred CCCCEEEE
Confidence 6898887
No 289
>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A
Probab=58.20 E-value=10 Score=35.43 Aligned_cols=71 Identities=21% Similarity=0.274 Sum_probs=43.1
Q ss_pred CccEEEEEeCC-hhHHHHHHHHHhcCCCcEEEEecCCCCC-cC--------CCCCccccCCCCCCHHHHHHHHHHc----
Q 010065 81 QRVVVLVIGGG-GREHALCYALKRSHSCDAVFCAPGNAGI-SN--------SGDATCIPDLDVLDGDAVISFCRKW---- 146 (519)
Q Consensus 81 ~~~~vliiG~g-~~~~~l~~~l~~~~g~~~v~~~~~~~~~-~~--------~~~~~~v~~~d~~d~~~l~~~~~~~---- 146 (519)
+.++++|+|++ +....+++.|.+. |.++++++..+... .. -.....+ ..|..|.+.+.+++++.
T Consensus 17 ~~k~~lVTGas~gIG~aia~~l~~~-G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~Dv~~~~~v~~~~~~~~~~~ 94 (270)
T 3is3_A 17 DGKVALVTGSGRGIGAAVAVHLGRL-GAKVVVNYANSTKDAEKVVSEIKALGSDAIAI-KADIRQVPEIVKLFDQAVAHF 94 (270)
T ss_dssp TTCEEEESCTTSHHHHHHHHHHHHT-TCEEEEEESSCHHHHHHHHHHHHHTTCCEEEE-ECCTTSHHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCchHHHHHHHHHHHC-CCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEE-EcCCCCHHHHHHHHHHHHHHc
Confidence 45789999876 4556788888887 88887764322110 00 0011222 56777777666665543
Q ss_pred -CCcEEEE
Q 010065 147 -SVGLVVV 153 (519)
Q Consensus 147 -~id~Vi~ 153 (519)
++|+++.
T Consensus 95 g~id~lvn 102 (270)
T 3is3_A 95 GHLDIAVS 102 (270)
T ss_dssp SCCCEEEC
T ss_pred CCCCEEEE
Confidence 6888886
No 290
>3zv4_A CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; oxidoreductase, short chain dehydrogenase/oxidoreductase, SD comamonas testosteroni; 1.80A {Pandoraea pnomenusa} SCOP: c.2.1.2 PDB: 2y99_A* 3zv3_A 2y93_A 3zv5_A* 3zv6_A* 1bdb_A*
Probab=58.14 E-value=10 Score=35.70 Aligned_cols=71 Identities=15% Similarity=0.180 Sum_probs=44.2
Q ss_pred CccEEEEEeCC-hhHHHHHHHHHhcCCCcEEEEecCCCCCcC----C-CCCccccCCCCCCHHHHHHHHHHc-----CCc
Q 010065 81 QRVVVLVIGGG-GREHALCYALKRSHSCDAVFCAPGNAGISN----S-GDATCIPDLDVLDGDAVISFCRKW-----SVG 149 (519)
Q Consensus 81 ~~~~vliiG~g-~~~~~l~~~l~~~~g~~~v~~~~~~~~~~~----~-~~~~~v~~~d~~d~~~l~~~~~~~-----~id 149 (519)
+.++++|+|++ +....+++.|.+. |.+++.++.+...... . .....+ ..|..+.+.+.+++++. ++|
T Consensus 4 ~gk~~lVTGas~GIG~aia~~la~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~-~~Dv~~~~~v~~~~~~~~~~~g~iD 81 (281)
T 3zv4_A 4 TGEVALITGGASGLGRALVDRFVAE-GARVAVLDKSAERLRELEVAHGGNAVGV-VGDVRSLQDQKRAAERCLAAFGKID 81 (281)
T ss_dssp TTCEEEEETCSSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHTBTTEEEE-ECCTTCHHHHHHHHHHHHHHHSCCC
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHC-cCEEEEEeCCHHHHHHHHHHcCCcEEEE-EcCCCCHHHHHHHHHHHHHhcCCCC
Confidence 35789999966 4556788888887 8888877543111000 0 111222 56888877766665543 789
Q ss_pred EEEE
Q 010065 150 LVVV 153 (519)
Q Consensus 150 ~Vi~ 153 (519)
+++.
T Consensus 82 ~lvn 85 (281)
T 3zv4_A 82 TLIP 85 (281)
T ss_dssp EEEC
T ss_pred EEEE
Confidence 8886
No 291
>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A*
Probab=57.81 E-value=13 Score=34.13 Aligned_cols=70 Identities=20% Similarity=0.242 Sum_probs=43.4
Q ss_pred ccEEEEEeCC-hhHHHHHHHHHhcCCCcEEEEecCCCCCcC--------CCCCccccCCCCCCHHHHHHHHHH-----cC
Q 010065 82 RVVVLVIGGG-GREHALCYALKRSHSCDAVFCAPGNAGISN--------SGDATCIPDLDVLDGDAVISFCRK-----WS 147 (519)
Q Consensus 82 ~~~vliiG~g-~~~~~l~~~l~~~~g~~~v~~~~~~~~~~~--------~~~~~~v~~~d~~d~~~l~~~~~~-----~~ 147 (519)
.++++|+|++ +....++..|.+. |++++.++.+...... ......+ ..|..|.+.+.+++++ .+
T Consensus 7 ~k~~lVTGas~gIG~aia~~l~~~-G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~-~~Dv~~~~~~~~~~~~~~~~~g~ 84 (247)
T 2jah_A 7 GKVALITGASSGIGEATARALAAE-GAAVAIAARRVEKLRALGDELTAAGAKVHVL-ELDVADRQGVDAAVASTVEALGG 84 (247)
T ss_dssp TCEEEEESCSSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHHTTCCEEEE-ECCTTCHHHHHHHHHHHHHHHSC
T ss_pred CCEEEEECCCCHHHHHHHHHHHHC-CCEEEEEECCHHHHHHHHHHHHhcCCcEEEE-ECCCCCHHHHHHHHHHHHHHcCC
Confidence 4789999966 4556788888887 8888776533110000 0011222 5687887776666543 27
Q ss_pred CcEEEE
Q 010065 148 VGLVVV 153 (519)
Q Consensus 148 id~Vi~ 153 (519)
+|+++.
T Consensus 85 id~lv~ 90 (247)
T 2jah_A 85 LDILVN 90 (247)
T ss_dssp CSEEEE
T ss_pred CCEEEE
Confidence 999987
No 292
>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans}
Probab=57.69 E-value=7.3 Score=36.67 Aligned_cols=71 Identities=17% Similarity=0.179 Sum_probs=44.4
Q ss_pred CccEEEEEeCC-hhHHHHHHHHHhcCCCcEEEEecCCCCCc-------CC-C---CCccccCCCCCCHHHHHHHHHHc--
Q 010065 81 QRVVVLVIGGG-GREHALCYALKRSHSCDAVFCAPGNAGIS-------NS-G---DATCIPDLDVLDGDAVISFCRKW-- 146 (519)
Q Consensus 81 ~~~~vliiG~g-~~~~~l~~~l~~~~g~~~v~~~~~~~~~~-------~~-~---~~~~v~~~d~~d~~~l~~~~~~~-- 146 (519)
+.++++|+|++ +....++..|.+. |.++++++.+..... .. . ....+ ..|..|.+.+.+++++.
T Consensus 10 ~~k~vlVTGas~gIG~aia~~l~~~-G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~-~~Dv~~~~~v~~~~~~~~~ 87 (281)
T 3svt_A 10 QDRTYLVTGGGSGIGKGVAAGLVAA-GASVMIVGRNPDKLAGAVQELEALGANGGAIRYE-PTDITNEDETARAVDAVTA 87 (281)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHTTCCSSCEEEEE-ECCTTSHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEE-eCCCCCHHHHHHHHHHHHH
Confidence 35789999976 4556788888887 898877753311100 00 0 11122 46888877776666543
Q ss_pred ---CCcEEEE
Q 010065 147 ---SVGLVVV 153 (519)
Q Consensus 147 ---~id~Vi~ 153 (519)
++|.++.
T Consensus 88 ~~g~id~lv~ 97 (281)
T 3svt_A 88 WHGRLHGVVH 97 (281)
T ss_dssp HHSCCCEEEE
T ss_pred HcCCCCEEEE
Confidence 7999987
No 293
>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}
Probab=57.55 E-value=5.4 Score=35.61 Aligned_cols=65 Identities=15% Similarity=0.129 Sum_probs=37.4
Q ss_pred cEEEEEeCC-hhHHHHHHHHHhcCCCcEEEEecCCCCCcCC-CCCccccCCCCCCHHHHHHHHHHcCCcEEEE
Q 010065 83 VVVLVIGGG-GREHALCYALKRSHSCDAVFCAPGNAGISNS-GDATCIPDLDVLDGDAVISFCRKWSVGLVVV 153 (519)
Q Consensus 83 ~~vliiG~g-~~~~~l~~~l~~~~g~~~v~~~~~~~~~~~~-~~~~~v~~~d~~d~~~l~~~~~~~~id~Vi~ 153 (519)
|||+|+|+. +....++..|.+. |++++.+..+....... .....+ ..|..|.+. +.. .++|.||.
T Consensus 1 MkvlVtGatG~iG~~l~~~L~~~-g~~V~~~~R~~~~~~~~~~~~~~~-~~D~~d~~~--~~~--~~~d~vi~ 67 (221)
T 3ew7_A 1 MKIGIIGATGRAGSRILEEAKNR-GHEVTAIVRNAGKITQTHKDINIL-QKDIFDLTL--SDL--SDQNVVVD 67 (221)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHT-TCEEEEEESCSHHHHHHCSSSEEE-ECCGGGCCH--HHH--TTCSEEEE
T ss_pred CeEEEEcCCchhHHHHHHHHHhC-CCEEEEEEcCchhhhhccCCCeEE-eccccChhh--hhh--cCCCEEEE
Confidence 589999964 4566788888877 88887775432111100 111222 345544333 222 46898887
No 294
>2glx_A 1,5-anhydro-D-fructose reductase; NADP(H) dependent reductase, rossmann-fold, sugar metabolism, 1,5-anhydro-D-mannitol, oxidoreductase; HET: NDP; 2.20A {Ensifer adhaerens}
Probab=57.50 E-value=6.5 Score=38.06 Aligned_cols=140 Identities=16% Similarity=0.077 Sum_probs=67.9
Q ss_pred cEEEEEeCChhHHHH-HHHHHhcCCCcEEEEecCCCCCcCCCCCcccc-CCCCCCHHHHHHHHHHcCCcEEEECCChhhH
Q 010065 83 VVVLVIGGGGREHAL-CYALKRSHSCDAVFCAPGNAGISNSGDATCIP-DLDVLDGDAVISFCRKWSVGLVVVGPEAPLV 160 (519)
Q Consensus 83 ~~vliiG~g~~~~~l-~~~l~~~~g~~~v~~~~~~~~~~~~~~~~~v~-~~d~~d~~~l~~~~~~~~id~Vi~g~E~~~~ 160 (519)
++|.|||.|...... +..+.+ .+++++.+.+.++..... ...... ..-..+.+++ +...++|+|+...-....
T Consensus 1 ~~vgiiG~G~~g~~~~~~~l~~-~~~~~vav~d~~~~~~~~-~~~~~g~~~~~~~~~~~---l~~~~~D~V~i~tp~~~h 75 (332)
T 2glx_A 1 NRWGLIGASTIAREWVIGAIRA-TGGEVVSMMSTSAERGAA-YATENGIGKSVTSVEEL---VGDPDVDAVYVSTTNELH 75 (332)
T ss_dssp CEEEEESCCHHHHHTHHHHHHH-TTCEEEEEECSCHHHHHH-HHHHTTCSCCBSCHHHH---HTCTTCCEEEECSCGGGH
T ss_pred CeEEEEcccHHHHHhhhHHhhc-CCCeEEEEECCCHHHHHH-HHHHcCCCcccCCHHHH---hcCCCCCEEEEeCChhHh
Confidence 479999999755544 556666 588776554332211100 001110 0012344444 334579999986444333
Q ss_pred HHHHHHHHHCCCCeeCCcHHHHHHhcCHHHHHHHHHHcCCCCCC---eeecCCHHHHHHHHH--HhCCCEEEE
Q 010065 161 SGLANKLVKAGIPTFGPSSEAAALEGSKNFMKNLCDKYGIPTAK---YKTFTDPNAAKQYIQ--EEGAPIVVK 228 (519)
Q Consensus 161 ~~~a~~le~~gip~~g~~~~~~~~~~dK~~~k~~l~~~Gi~~p~---~~~v~~~~~~~~~~~--~~g~P~VvK 228 (519)
..++..+-+.|.+++.-.+-+.. ..+-..+.+++++.|+..-. +........+.+.++ .+|-+..+.
T Consensus 76 ~~~~~~al~~Gk~v~~ekP~~~~-~~~~~~l~~~a~~~g~~~~~~~~~r~~p~~~~~~~~i~~g~iG~i~~v~ 147 (332)
T 2glx_A 76 REQTLAAIRAGKHVLCEKPLAMT-LEDAREMVVAAREAGVVLGTNHHLRNAAAHRAMRDAIAEGRIGRPIAAR 147 (332)
T ss_dssp HHHHHHHHHTTCEEEECSSSCSS-HHHHHHHHHHHHHHTCCEEECCCGGGSHHHHHHHHHHHTTTTSSEEEEE
T ss_pred HHHHHHHHHCCCeEEEeCCCcCC-HHHHHHHHHHHHHcCCEEEEeehhhcCHHHHHHHHHHHcCCCCCeEEEE
Confidence 34444455568877633222211 11223455667777876411 111112344555554 356555444
No 295
>3uhf_A Glutamate racemase; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta sandwich fold, isomerase; HET: DGL; 1.83A {Campylobacter jejuni} PDB: 3uho_A* 3uhp_A
Probab=57.48 E-value=1e+02 Score=28.89 Aligned_cols=87 Identities=15% Similarity=0.268 Sum_probs=50.5
Q ss_pred CccEEEEEeCChhHHHHHHHHHhcC-CCcEEEEecCCCCCcCCCCCccccCCCCCCHHHHH-------HHHHHcCCcEEE
Q 010065 81 QRVVVLVIGGGGREHALCYALKRSH-SCDAVFCAPGNAGISNSGDATCIPDLDVLDGDAVI-------SFCRKWSVGLVV 152 (519)
Q Consensus 81 ~~~~vliiG~g~~~~~l~~~l~~~~-g~~~v~~~~~~~~~~~~~~~~~v~~~d~~d~~~l~-------~~~~~~~id~Vi 152 (519)
..+.|+|+.+|--...+++.+++.. ..+.+++.++. .. +.-..+.+.+. +.+.+.++|+|+
T Consensus 23 ~~~~IgvfDSGvGGLtv~~~i~~~lP~e~~iy~~D~a----------~~-PYG~ks~e~i~~~~~~~~~~L~~~g~d~IV 91 (274)
T 3uhf_A 23 NAMKIGVFDSGVGGLSVLKSLYEARLFDEIIYYGDTA----------RV-PYGVKDKDTIIKFCLEALDFFEQFQIDMLI 91 (274)
T ss_dssp SCCEEEEEESSSTTHHHHHHHHHTTCCSEEEEEECTT----------TC-CCTTSCHHHHHHHHHHHHHHHTTSCCSEEE
T ss_pred CCCeEEEEECCCChHHHHHHHHHHCCCCCEEEEecCC----------CC-CCCCCCHHHHHHHHHHHHHHHHHCCCCEEE
Confidence 3578999988843445677777664 55556654321 11 11223333333 333456899999
Q ss_pred ECCChhhHHHHHHHHHHCCCCeeCCc
Q 010065 153 VGPEAPLVSGLANKLVKAGIPTFGPS 178 (519)
Q Consensus 153 ~g~E~~~~~~~a~~le~~gip~~g~~ 178 (519)
..+.+.....+.+.-+..++|++|.-
T Consensus 92 IACNTa~~~al~~lr~~~~iPvigii 117 (274)
T 3uhf_A 92 IACNTASAYALDALRAKAHFPVYGVI 117 (274)
T ss_dssp ECCHHHHHHSHHHHHHHCSSCEECSH
T ss_pred EeCCChhHHHHHHHHHhcCCCEEcCC
Confidence 97766542223333456799999743
No 296
>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}
Probab=57.45 E-value=4.4 Score=36.46 Aligned_cols=65 Identities=14% Similarity=0.070 Sum_probs=37.3
Q ss_pred cEEEEEeCC-hhHHHHHHHHHhcCCCcEEEEecCCCCCcC-C-CCCccccCCCCCCHHHHHHHHHHcCCcEEEE
Q 010065 83 VVVLVIGGG-GREHALCYALKRSHSCDAVFCAPGNAGISN-S-GDATCIPDLDVLDGDAVISFCRKWSVGLVVV 153 (519)
Q Consensus 83 ~~vliiG~g-~~~~~l~~~l~~~~g~~~v~~~~~~~~~~~-~-~~~~~v~~~d~~d~~~l~~~~~~~~id~Vi~ 153 (519)
|||+|+|+. +....++..|.+. |++++.+..+...... . .....+ ..|..|.+. +. -.++|.||.
T Consensus 1 MkilVtGatG~iG~~l~~~L~~~-g~~V~~~~R~~~~~~~~~~~~~~~~-~~D~~d~~~--~~--~~~~d~vi~ 68 (224)
T 3h2s_A 1 MKIAVLGATGRAGSAIVAEARRR-GHEVLAVVRDPQKAADRLGATVATL-VKEPLVLTE--AD--LDSVDAVVD 68 (224)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHTCTTSEEE-ECCGGGCCH--HH--HTTCSEEEE
T ss_pred CEEEEEcCCCHHHHHHHHHHHHC-CCEEEEEEecccccccccCCCceEE-ecccccccH--hh--cccCCEEEE
Confidence 579999984 4566788888877 8888777543111100 0 111222 345544333 22 246898887
No 297
>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A*
Probab=57.25 E-value=13 Score=34.96 Aligned_cols=70 Identities=21% Similarity=0.282 Sum_probs=42.9
Q ss_pred ccEEEEEeCC-hhHHHHHHHHHhcCCCcEEEEecCCCCCcC--------CCCCccccCCCCCCHHHHHHHHHHc-----C
Q 010065 82 RVVVLVIGGG-GREHALCYALKRSHSCDAVFCAPGNAGISN--------SGDATCIPDLDVLDGDAVISFCRKW-----S 147 (519)
Q Consensus 82 ~~~vliiG~g-~~~~~l~~~l~~~~g~~~v~~~~~~~~~~~--------~~~~~~v~~~d~~d~~~l~~~~~~~-----~ 147 (519)
.++++|+|++ +....++..|.+. |++++.++.+...... -.....+ ..|..|.+.+.+++++. +
T Consensus 22 ~k~vlVTGas~gIG~~ia~~l~~~-G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~-~~Dv~~~~~v~~~~~~~~~~~g~ 99 (277)
T 2rhc_B 22 SEVALVTGATSGIGLEIARRLGKE-GLRVFVCARGEEGLRTTLKELREAGVEADGR-TCDVRSVPEIEALVAAVVERYGP 99 (277)
T ss_dssp SCEEEEETCSSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHHTTCCEEEE-ECCTTCHHHHHHHHHHHHHHTCS
T ss_pred CCEEEEECCCCHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHHHhcCCceEEE-ECCCCCHHHHHHHHHHHHHHhCC
Confidence 4689999876 3556788888877 8888776543111000 0011222 56777877766655532 6
Q ss_pred CcEEEE
Q 010065 148 VGLVVV 153 (519)
Q Consensus 148 id~Vi~ 153 (519)
+|++|.
T Consensus 100 iD~lv~ 105 (277)
T 2rhc_B 100 VDVLVN 105 (277)
T ss_dssp CSEEEE
T ss_pred CCEEEE
Confidence 898887
No 298
>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti}
Probab=56.89 E-value=11 Score=35.48 Aligned_cols=70 Identities=23% Similarity=0.306 Sum_probs=44.1
Q ss_pred ccEEEEEeCC-hhHHHHHHHHHhcCCCcEEEEecCCCCCc----C---C-CCCccccCCCCCCHHHHHHHHHHc-----C
Q 010065 82 RVVVLVIGGG-GREHALCYALKRSHSCDAVFCAPGNAGIS----N---S-GDATCIPDLDVLDGDAVISFCRKW-----S 147 (519)
Q Consensus 82 ~~~vliiG~g-~~~~~l~~~l~~~~g~~~v~~~~~~~~~~----~---~-~~~~~v~~~d~~d~~~l~~~~~~~-----~ 147 (519)
.+.++|+|++ +....+++.|.+. |.++++++.+..... . . .....+ ..|..|.+.+.+++++. +
T Consensus 28 ~k~~lVTGas~GIG~aia~~la~~-G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~-~~Dv~d~~~v~~~~~~~~~~~g~ 105 (283)
T 3v8b_A 28 SPVALITGAGSGIGRATALALAAD-GVTVGALGRTRTEVEEVADEIVGAGGQAIAL-EADVSDELQMRNAVRDLVLKFGH 105 (283)
T ss_dssp CCEEEEESCSSHHHHHHHHHHHHT-TCEEEEEESSHHHHHHHHHHHTTTTCCEEEE-ECCTTCHHHHHHHHHHHHHHHSC
T ss_pred CCEEEEECCCCHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHHHhcCCcEEEE-EccCCCHHHHHHHHHHHHHHhCC
Confidence 4678999866 4566788888887 898877754311100 0 0 011122 56888877776666543 7
Q ss_pred CcEEEE
Q 010065 148 VGLVVV 153 (519)
Q Consensus 148 id~Vi~ 153 (519)
+|+++.
T Consensus 106 iD~lVn 111 (283)
T 3v8b_A 106 LDIVVA 111 (283)
T ss_dssp CCEEEE
T ss_pred CCEEEE
Confidence 999987
No 299
>2yjn_A ERYCIII, glycosyltransferase; transferase, cytochrome P450; 3.09A {Saccharopolyspora erythraea}
Probab=56.86 E-value=21 Score=35.89 Aligned_cols=33 Identities=12% Similarity=0.223 Sum_probs=24.0
Q ss_pred CccEEEEEeCChhH-----HHHHHHHHhcCCCcEEEEec
Q 010065 81 QRVVVLVIGGGGRE-----HALCYALKRSHSCDAVFCAP 114 (519)
Q Consensus 81 ~~~~vliiG~g~~~-----~~l~~~l~~~~g~~~v~~~~ 114 (519)
.+|+|++++.++.. .++++.|++. |+++.++.+
T Consensus 19 ~~mrIl~~~~~~~GHv~p~l~la~~L~~~-GheV~~~~~ 56 (441)
T 2yjn_A 19 SHMRVVFSSMASKSHLFGLVPLAWAFRAA-GHEVRVVAS 56 (441)
T ss_dssp CCCEEEEECCSCHHHHTTTHHHHHHHHHT-TCEEEEEEC
T ss_pred CccEEEEEcCCCcchHhHHHHHHHHHHHC-CCeEEEEeC
Confidence 45788888766433 5788888876 888887753
No 300
>1lc0_A Biliverdin reductase A; oxidoreductase, tetrapyrrole, bIle pigment, heme, bilirubin, NADH; 1.20A {Rattus norvegicus} SCOP: c.2.1.3 d.81.1.4 PDB: 1lc3_A* 1gcu_A 2h63_A*
Probab=56.60 E-value=20 Score=34.04 Aligned_cols=111 Identities=11% Similarity=0.074 Sum_probs=56.9
Q ss_pred CccEEEEEeCChhHHHHHHHHHh---cCCCcEEEEecCCCCCcCCCCCccccCCCCCCHHHHHHHHHHcCCcEEEECCCh
Q 010065 81 QRVVVLVIGGGGREHALCYALKR---SHSCDAVFCAPGNAGISNSGDATCIPDLDVLDGDAVISFCRKWSVGLVVVGPEA 157 (519)
Q Consensus 81 ~~~~vliiG~g~~~~~l~~~l~~---~~g~~~v~~~~~~~~~~~~~~~~~v~~~d~~d~~~l~~~~~~~~id~Vi~g~E~ 157 (519)
++++|.|||.|......+..+.+ ..+++.+.+.+.+... ... .+...+.+++ +...++|+|+...-.
T Consensus 6 ~~~rvgiIG~G~iG~~~~~~l~~~~~~~~~~lvav~d~~~~a------~~~-g~~~~~~~el---l~~~~vD~V~i~tp~ 75 (294)
T 1lc0_A 6 GKFGVVVVGVGRAGSVRLRDLKDPRSAAFLNLIGFVSRRELG------SLD-EVRQISLEDA---LRSQEIDVAYICSES 75 (294)
T ss_dssp CSEEEEEECCSHHHHHHHHHHTSHHHHTTEEEEEEECSSCCC------EET-TEEBCCHHHH---HHCSSEEEEEECSCG
T ss_pred CcceEEEEEEcHHHHHHHHHHhccccCCCEEEEEEECchHHH------HHc-CCCCCCHHHH---hcCCCCCEEEEeCCc
Confidence 46799999999544333444543 2356665554332110 111 1112455554 445679999986444
Q ss_pred hhHHHHHHHHHHCCCCeeCCcHHHHHHhcCHHHHHHHHHHcCCCC
Q 010065 158 PLVSGLANKLVKAGIPTFGPSSEAAALEGSKNFMKNLCDKYGIPT 202 (519)
Q Consensus 158 ~~~~~~a~~le~~gip~~g~~~~~~~~~~dK~~~k~~l~~~Gi~~ 202 (519)
..-..++..+-+.|.+++.-.|-+... .+=..+.+++++.|+..
T Consensus 76 ~~H~~~~~~al~aGkhVl~EKPla~~~-~ea~~l~~~a~~~g~~~ 119 (294)
T 1lc0_A 76 SSHEDYIRQFLQAGKHVLVEYPMTLSF-AAAQELWELAAQKGRVL 119 (294)
T ss_dssp GGHHHHHHHHHHTTCEEEEESCSCSCH-HHHHHHHHHHHHTTCCE
T ss_pred HhHHHHHHHHHHCCCcEEEeCCCCCCH-HHHHHHHHHHHHhCCEE
Confidence 333344445556788776322221111 11133455667777653
No 301
>3oti_A CALG3; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD C0T; 1.60A {Micromonospora echinospora} PDB: 3d0q_A* 3d0r_A*
Probab=56.53 E-value=24 Score=34.77 Aligned_cols=38 Identities=21% Similarity=0.307 Sum_probs=24.2
Q ss_pred HHHHHHHHHHcCCcEEEECCChhhHHHHHHHHHHCCCCeeC
Q 010065 136 GDAVISFCRKWSVGLVVVGPEAPLVSGLANKLVKAGIPTFG 176 (519)
Q Consensus 136 ~~~l~~~~~~~~id~Vi~g~E~~~~~~~a~~le~~gip~~g 176 (519)
...+.+++++.++|+|+... ....+ .-..+.+|+|++.
T Consensus 119 ~~~l~~~l~~~~pDlVv~d~--~~~~~-~~aA~~~giP~v~ 156 (398)
T 3oti_A 119 VDGTMALVDDYRPDLVVYEQ--GATVG-LLAADRAGVPAVQ 156 (398)
T ss_dssp HHHHHHHHHHHCCSEEEEET--TCHHH-HHHHHHHTCCEEE
T ss_pred HHHHHHHHHHcCCCEEEECc--hhhHH-HHHHHHcCCCEEE
Confidence 45677888889999998731 11111 2234678999863
No 302
>3tl3_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 1.85A {Mycobacterium ulcerans}
Probab=56.51 E-value=13 Score=34.24 Aligned_cols=72 Identities=24% Similarity=0.208 Sum_probs=43.7
Q ss_pred CccEEEEEeCC-hhHHHHHHHHHhcCCCcEEEEecCCCCC-cCC-CCCccccCCCCCCHHHHHHHHHHc----CCcEEEE
Q 010065 81 QRVVVLVIGGG-GREHALCYALKRSHSCDAVFCAPGNAGI-SNS-GDATCIPDLDVLDGDAVISFCRKW----SVGLVVV 153 (519)
Q Consensus 81 ~~~~vliiG~g-~~~~~l~~~l~~~~g~~~v~~~~~~~~~-~~~-~~~~~v~~~d~~d~~~l~~~~~~~----~id~Vi~ 153 (519)
+.++++|+|++ +....++..|.+. |.++++++...... ... .....+ ..|..|.+.+.++++.. ++|.++.
T Consensus 8 ~~k~vlVTGas~gIG~aia~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~-~~D~~~~~~v~~~~~~~~~~g~id~lv~ 85 (257)
T 3tl3_A 8 RDAVAVVTGGASGLGLATTKRLLDA-GAQVVVLDIRGEDVVADLGDRARFA-AADVTDEAAVASALDLAETMGTLRIVVN 85 (257)
T ss_dssp --CEEEEETTTSHHHHHHHHHHHHH-TCEEEEEESSCHHHHHHTCTTEEEE-ECCTTCHHHHHHHHHHHHHHSCEEEEEE
T ss_pred cCCEEEEeCCCCHHHHHHHHHHHHC-CCEEEEEeCchHHHHHhcCCceEEE-ECCCCCHHHHHHHHHHHHHhCCCCEEEE
Confidence 35689999976 4556788888887 88888775421110 000 112223 56888877666655432 7899887
Q ss_pred C
Q 010065 154 G 154 (519)
Q Consensus 154 g 154 (519)
.
T Consensus 86 n 86 (257)
T 3tl3_A 86 C 86 (257)
T ss_dssp C
T ss_pred C
Confidence 3
No 303
>1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A*
Probab=56.49 E-value=10 Score=35.13 Aligned_cols=70 Identities=17% Similarity=0.080 Sum_probs=43.6
Q ss_pred ccEEEEEeCC-hhHHHHHHHHHhcCCCcEEEEecCCCCCc----CC-CCCccccCCCCCCHHHHHHHHHHc-----CCcE
Q 010065 82 RVVVLVIGGG-GREHALCYALKRSHSCDAVFCAPGNAGIS----NS-GDATCIPDLDVLDGDAVISFCRKW-----SVGL 150 (519)
Q Consensus 82 ~~~vliiG~g-~~~~~l~~~l~~~~g~~~v~~~~~~~~~~----~~-~~~~~v~~~d~~d~~~l~~~~~~~-----~id~ 150 (519)
.++++|+|++ +....+++.|.+. |++++.++.+..... .. .....+ ..|..|.+.+.+++++. ++|.
T Consensus 5 ~k~vlVTGas~gIG~~ia~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~-~~D~~~~~~~~~~~~~~~~~~g~iD~ 82 (254)
T 1hdc_A 5 GKTVIITGGARGLGAEAARQAVAA-GARVVLADVLDEEGAATARELGDAARYQ-HLDVTIEEDWQRVVAYAREEFGSVDG 82 (254)
T ss_dssp CSEEEEETTTSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHTTGGGEEEE-ECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred CCEEEEECCCcHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHhCCceeEE-EecCCCHHHHHHHHHHHHHHcCCCCE
Confidence 4689999975 4566788888887 898877754311100 00 011122 46878877766665532 7999
Q ss_pred EEE
Q 010065 151 VVV 153 (519)
Q Consensus 151 Vi~ 153 (519)
++.
T Consensus 83 lv~ 85 (254)
T 1hdc_A 83 LVN 85 (254)
T ss_dssp EEE
T ss_pred EEE
Confidence 997
No 304
>3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A*
Probab=56.43 E-value=11 Score=34.36 Aligned_cols=70 Identities=23% Similarity=0.199 Sum_probs=45.4
Q ss_pred ccEEEEEeCC-hhHHHHHHHHHhcCCCcEEEEecCCCCCc----CCCCCccccCCCCCCHHHHHHHHHHc-CCcEEEE
Q 010065 82 RVVVLVIGGG-GREHALCYALKRSHSCDAVFCAPGNAGIS----NSGDATCIPDLDVLDGDAVISFCRKW-SVGLVVV 153 (519)
Q Consensus 82 ~~~vliiG~g-~~~~~l~~~l~~~~g~~~v~~~~~~~~~~----~~~~~~~v~~~d~~d~~~l~~~~~~~-~id~Vi~ 153 (519)
.++++|+|++ +....++..|.+. |++++.++.+..... .......+ ..|..|.+.+.+++++. ++|++|.
T Consensus 7 ~k~vlITGasggiG~~~a~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~-~~D~~~~~~~~~~~~~~~~id~vi~ 82 (244)
T 3d3w_A 7 GRRVLVTGAGKGIGRGTVQALHAT-GARVVAVSRTQADLDSLVRECPGIEPV-CVDLGDWEATERALGSVGPVDLLVN 82 (244)
T ss_dssp TCEEEEESTTSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHSTTCEEE-ECCTTCHHHHHHHHTTCCCCCEEEE
T ss_pred CcEEEEECCCcHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHcCCCCEE-EEeCCCHHHHHHHHHHcCCCCEEEE
Confidence 4689999975 4566788888877 888777654311100 00111223 56888888888877654 5899987
No 305
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=56.40 E-value=15 Score=37.05 Aligned_cols=87 Identities=13% Similarity=-0.011 Sum_probs=50.1
Q ss_pred ccEEEEEeCChhHHHHHHHHHhcCCCcEEEEecCCCCCcCC--CCCccccCCCCCCHHHHHHHHHHcCCcEEEEC-CChh
Q 010065 82 RVVVLVIGGGGREHALCYALKRSHSCDAVFCAPGNAGISNS--GDATCIPDLDVLDGDAVISFCRKWSVGLVVVG-PEAP 158 (519)
Q Consensus 82 ~~~vliiG~g~~~~~l~~~l~~~~g~~~v~~~~~~~~~~~~--~~~~~v~~~d~~d~~~l~~~~~~~~id~Vi~g-~E~~ 158 (519)
+++|+|+|.|.....+++.|.+. |+++++++.+....... .....+ ..|..+.+.|.+ +.-.+.|+|+.. +++.
T Consensus 4 ~~~viIiG~Gr~G~~va~~L~~~-g~~vvvId~d~~~v~~~~~~g~~vi-~GDat~~~~L~~-agi~~A~~viv~~~~~~ 80 (413)
T 3l9w_A 4 GMRVIIAGFGRFGQITGRLLLSS-GVKMVVLDHDPDHIETLRKFGMKVF-YGDATRMDLLES-AGAAKAEVLINAIDDPQ 80 (413)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHT-TCCEEEEECCHHHHHHHHHTTCCCE-ESCTTCHHHHHH-TTTTTCSEEEECCSSHH
T ss_pred CCeEEEECCCHHHHHHHHHHHHC-CCCEEEEECCHHHHHHHHhCCCeEE-EcCCCCHHHHHh-cCCCccCEEEECCCChH
Confidence 46799999997777888888877 89999887542111000 011122 457777655443 323457777774 3443
Q ss_pred hHHHHHHHHHHCC
Q 010065 159 LVSGLANKLVKAG 171 (519)
Q Consensus 159 ~~~~~a~~le~~g 171 (519)
....++..+..++
T Consensus 81 ~n~~i~~~ar~~~ 93 (413)
T 3l9w_A 81 TNLQLTEMVKEHF 93 (413)
T ss_dssp HHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHhC
Confidence 3333444455444
No 306
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=56.40 E-value=11 Score=34.03 Aligned_cols=31 Identities=19% Similarity=0.206 Sum_probs=26.3
Q ss_pred cEEEEEeCChhHHHHHHHHHhcCCCcEEEEec
Q 010065 83 VVVLVIGGGGREHALCYALKRSHSCDAVFCAP 114 (519)
Q Consensus 83 ~~vliiG~g~~~~~l~~~l~~~~g~~~v~~~~ 114 (519)
..|+|||+|.....++..|++. |+++++++.
T Consensus 3 ~dV~IIGaGpaGL~aA~~La~~-G~~V~v~Ek 33 (336)
T 3kkj_A 3 VPIAIIGTGIAGLSAAQALTAA-GHQVHLFDK 33 (336)
T ss_dssp CCEEEECCSHHHHHHHHHHHHT-TCCEEEECS
T ss_pred CCEEEECcCHHHHHHHHHHHHC-CCCEEEEEC
Confidence 4699999997777789999888 999998864
No 307
>3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV}
Probab=56.38 E-value=7.9 Score=36.11 Aligned_cols=70 Identities=13% Similarity=0.093 Sum_probs=44.3
Q ss_pred ccEEEEEeCC-hhHHHHHHHHHhcCCCcEEEEecCCCCCc-CC--CCCccccCCCCCCHHHHHHHHHHc-----CCcEEE
Q 010065 82 RVVVLVIGGG-GREHALCYALKRSHSCDAVFCAPGNAGIS-NS--GDATCIPDLDVLDGDAVISFCRKW-----SVGLVV 152 (519)
Q Consensus 82 ~~~vliiG~g-~~~~~l~~~l~~~~g~~~v~~~~~~~~~~-~~--~~~~~v~~~d~~d~~~l~~~~~~~-----~id~Vi 152 (519)
.++++|+|++ +....++..|.+. |.++++++.+..... .. .....+ ..|..|.+.+.+++++. ++|+++
T Consensus 27 ~k~vlVTGas~gIG~aia~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~-~~Dv~~~~~v~~~~~~~~~~~g~iD~lv 104 (260)
T 3gem_A 27 SAPILITGASQRVGLHCALRLLEH-GHRVIISYRTEHASVTELRQAGAVAL-YGDFSCETGIMAFIDLLKTQTSSLRAVV 104 (260)
T ss_dssp CCCEEESSTTSHHHHHHHHHHHHT-TCCEEEEESSCCHHHHHHHHHTCEEE-ECCTTSHHHHHHHHHHHHHHCSCCSEEE
T ss_pred CCEEEEECCCCHHHHHHHHHHHHC-CCEEEEEeCChHHHHHHHHhcCCeEE-ECCCCCHHHHHHHHHHHHHhcCCCCEEE
Confidence 4678888865 4556788888887 898887764422110 00 011223 56888877776666542 699999
Q ss_pred E
Q 010065 153 V 153 (519)
Q Consensus 153 ~ 153 (519)
.
T Consensus 105 ~ 105 (260)
T 3gem_A 105 H 105 (260)
T ss_dssp E
T ss_pred E
Confidence 7
No 308
>1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2
Probab=56.32 E-value=14 Score=34.31 Aligned_cols=71 Identities=18% Similarity=0.192 Sum_probs=43.5
Q ss_pred CccEEEEEeCC-hhHHHHHHHHHhcCCCcEEEEecCCCCCcC--------CCCCccccCCCCCCHHHHHHHHHHc-----
Q 010065 81 QRVVVLVIGGG-GREHALCYALKRSHSCDAVFCAPGNAGISN--------SGDATCIPDLDVLDGDAVISFCRKW----- 146 (519)
Q Consensus 81 ~~~~vliiG~g-~~~~~l~~~l~~~~g~~~v~~~~~~~~~~~--------~~~~~~v~~~d~~d~~~l~~~~~~~----- 146 (519)
+.++++|+|++ +....++..|.+. |+++++++.+...... -.....+ ..|..|.+.+.+++++.
T Consensus 6 ~~k~vlVTGas~gIG~~ia~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~-~~D~~~~~~~~~~~~~~~~~~g 83 (262)
T 1zem_A 6 NGKVCLVTGAGGNIGLATALRLAEE-GTAIALLDMNREALEKAEASVREKGVEARSY-VCDVTSEEAVIGTVDSVVRDFG 83 (262)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHTTTSCEEEE-ECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHHHhcCCcEEEE-EecCCCHHHHHHHHHHHHHHhC
Confidence 34789999976 4566788888887 8888776533110000 0011122 46777877766655432
Q ss_pred CCcEEEE
Q 010065 147 SVGLVVV 153 (519)
Q Consensus 147 ~id~Vi~ 153 (519)
++|+++.
T Consensus 84 ~id~lv~ 90 (262)
T 1zem_A 84 KIDFLFN 90 (262)
T ss_dssp CCCEEEE
T ss_pred CCCEEEE
Confidence 7899887
No 309
>1h5q_A NADP-dependent mannitol dehydrogenase; oxidoreductase, mannitol metabolism; HET: NAP; 1.50A {Agaricus bisporus} SCOP: c.2.1.2
Probab=56.31 E-value=19 Score=33.03 Aligned_cols=70 Identities=16% Similarity=0.199 Sum_probs=42.6
Q ss_pred ccEEEEEeCC-hhHHHHHHHHHhcCCCcEEEEecCCCCCcC---------CCCCccccCCCCCCHHHHHHHHHH-----c
Q 010065 82 RVVVLVIGGG-GREHALCYALKRSHSCDAVFCAPGNAGISN---------SGDATCIPDLDVLDGDAVISFCRK-----W 146 (519)
Q Consensus 82 ~~~vliiG~g-~~~~~l~~~l~~~~g~~~v~~~~~~~~~~~---------~~~~~~v~~~d~~d~~~l~~~~~~-----~ 146 (519)
.++++|+|++ +....++..|.+. |++++.++.+...... ......+ ..|..|.+.+.+++++ .
T Consensus 14 ~k~vlITGasggiG~~~a~~l~~~-G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~-~~Dl~~~~~~~~~~~~~~~~~~ 91 (265)
T 1h5q_A 14 NKTIIVTGGNRGIGLAFTRAVAAA-GANVAVIYRSAADAVEVTEKVGKEFGVKTKAY-QCDVSNTDIVTKTIQQIDADLG 91 (265)
T ss_dssp TEEEEEETTTSHHHHHHHHHHHHT-TEEEEEEESSCTTHHHHHHHHHHHHTCCEEEE-ECCTTCHHHHHHHHHHHHHHSC
T ss_pred CCEEEEECCCchHHHHHHHHHHHC-CCeEEEEeCcchhhHHHHHHHHHhcCCeeEEE-EeeCCCHHHHHHHHHHHHHhcC
Confidence 4689999966 3556788888877 8888777643221100 0011222 5677777766665543 2
Q ss_pred CCcEEEE
Q 010065 147 SVGLVVV 153 (519)
Q Consensus 147 ~id~Vi~ 153 (519)
++|.++.
T Consensus 92 ~id~li~ 98 (265)
T 1h5q_A 92 PISGLIA 98 (265)
T ss_dssp SEEEEEE
T ss_pred CCCEEEE
Confidence 4888886
No 310
>4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A*
Probab=56.25 E-value=13 Score=34.81 Aligned_cols=71 Identities=17% Similarity=0.325 Sum_probs=44.1
Q ss_pred CccEEEEEeCC-hhHHHHHHHHHhcCCCcEEEEecCCCCCcC---------CCCCccccCCCCCCHHHHHHHHHHc----
Q 010065 81 QRVVVLVIGGG-GREHALCYALKRSHSCDAVFCAPGNAGISN---------SGDATCIPDLDVLDGDAVISFCRKW---- 146 (519)
Q Consensus 81 ~~~~vliiG~g-~~~~~l~~~l~~~~g~~~v~~~~~~~~~~~---------~~~~~~v~~~d~~d~~~l~~~~~~~---- 146 (519)
+.++++|+|++ +....+++.|.+. |.++++++.+...... -.....+ ..|..|.+.+.+++++.
T Consensus 26 ~~k~~lVTGas~GIG~aia~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~-~~Dv~~~~~v~~~~~~~~~~~ 103 (277)
T 4fc7_A 26 RDKVAFITGGGSGIGFRIAEIFMRH-GCHTVIASRSLPRVLTAARKLAGATGRRCLPL-SMDVRAPPAVMAAVDQALKEF 103 (277)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHTT-TCEEEEEESCHHHHHHHHHHHHHHHSSCEEEE-ECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHHHHhcCCcEEEE-EcCCCCHHHHHHHHHHHHHHc
Confidence 45789999876 4556788888877 8888776543111000 0011222 56888877766665542
Q ss_pred -CCcEEEE
Q 010065 147 -SVGLVVV 153 (519)
Q Consensus 147 -~id~Vi~ 153 (519)
++|+++.
T Consensus 104 g~id~lv~ 111 (277)
T 4fc7_A 104 GRIDILIN 111 (277)
T ss_dssp SCCCEEEE
T ss_pred CCCCEEEE
Confidence 7999987
No 311
>2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2
Probab=56.00 E-value=12 Score=34.74 Aligned_cols=71 Identities=21% Similarity=0.160 Sum_probs=44.1
Q ss_pred CccEEEEEeCC-hhHHHHHHHHHhcCCCcEEEEecCCCCCc----CC------CCCccccCCCCCCHHHHHHHHHH----
Q 010065 81 QRVVVLVIGGG-GREHALCYALKRSHSCDAVFCAPGNAGIS----NS------GDATCIPDLDVLDGDAVISFCRK---- 145 (519)
Q Consensus 81 ~~~~vliiG~g-~~~~~l~~~l~~~~g~~~v~~~~~~~~~~----~~------~~~~~v~~~d~~d~~~l~~~~~~---- 145 (519)
+.++++|+|++ +....++..|.+. |++++.++.+..... .. .....+ ..|..|.+.+.++++.
T Consensus 6 ~~k~vlVTGas~gIG~~ia~~l~~~-G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~-~~D~~~~~~v~~~~~~~~~~ 83 (267)
T 2gdz_A 6 NGKVALVTGAAQGIGRAFAEALLLK-GAKVALVDWNLEAGVQCKAALHEQFEPQKTLFI-QCDVADQQQLRDTFRKVVDH 83 (267)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHTTTSCGGGEEEE-ECCTTSHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCCcHHHHHHHHHHHC-CCEEEEEECCHHHHHHHHHHHHhhcCCCceEEE-ecCCCCHHHHHHHHHHHHHH
Confidence 45689999976 4556788888887 888877653311000 00 011122 5688887777666654
Q ss_pred -cCCcEEEE
Q 010065 146 -WSVGLVVV 153 (519)
Q Consensus 146 -~~id~Vi~ 153 (519)
.++|+++.
T Consensus 84 ~g~id~lv~ 92 (267)
T 2gdz_A 84 FGRLDILVN 92 (267)
T ss_dssp HSCCCEEEE
T ss_pred cCCCCEEEE
Confidence 26899987
No 312
>4h15_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, nysgrc; HET: MSE; 1.45A {Sinorhizobium meliloti} PDB: 4h16_A*
Probab=55.96 E-value=56 Score=30.32 Aligned_cols=69 Identities=12% Similarity=0.105 Sum_probs=43.7
Q ss_pred CccEEEEEeCC-hhHHHHHHHHHhcCCCcEEEEecCCCCCcCCCCCccccCCCCCCHHHHHHHHHH-----cCCcEEEE
Q 010065 81 QRVVVLVIGGG-GREHALCYALKRSHSCDAVFCAPGNAGISNSGDATCIPDLDVLDGDAVISFCRK-----WSVGLVVV 153 (519)
Q Consensus 81 ~~~~vliiG~g-~~~~~l~~~l~~~~g~~~v~~~~~~~~~~~~~~~~~v~~~d~~d~~~l~~~~~~-----~~id~Vi~ 153 (519)
+.|.++|.|++ |...++++.|.++ |.++++.+.+.... ......+ ..|..+.+.+.+++++ -++|.++.
T Consensus 10 ~GK~alVTGas~GIG~aia~~la~~-Ga~V~~~~r~~~~~--~~~~~~~-~~Dv~~~~~v~~~~~~~~~~~G~iDilVn 84 (261)
T 4h15_A 10 RGKRALITAGTKGAGAATVSLFLEL-GAQVLTTARARPEG--LPEELFV-EADLTTKEGCAIVAEATRQRLGGVDVIVH 84 (261)
T ss_dssp TTCEEEESCCSSHHHHHHHHHHHHT-TCEEEEEESSCCTT--SCTTTEE-ECCTTSHHHHHHHHHHHHHHTSSCSEEEE
T ss_pred CCCEEEEeccCcHHHHHHHHHHHHc-CCEEEEEECCchhC--CCcEEEE-EcCCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence 35788888866 4556788999888 99988876543211 1111123 5677776666555443 25898886
No 313
>1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A*
Probab=55.96 E-value=9.3 Score=35.03 Aligned_cols=70 Identities=13% Similarity=0.231 Sum_probs=43.2
Q ss_pred ccEEEEEeCC-hhHHHHHHHHHhcCCCcEEEEecCCCCCcC--------CCCCccccCCCCCCHHHHHHHHHH-----cC
Q 010065 82 RVVVLVIGGG-GREHALCYALKRSHSCDAVFCAPGNAGISN--------SGDATCIPDLDVLDGDAVISFCRK-----WS 147 (519)
Q Consensus 82 ~~~vliiG~g-~~~~~l~~~l~~~~g~~~v~~~~~~~~~~~--------~~~~~~v~~~d~~d~~~l~~~~~~-----~~ 147 (519)
.++++|+|++ +....++..|.+. |++++.++.+...... ......+ ..|..|.+.+.+++++ .+
T Consensus 11 ~~~vlVtGasggiG~~la~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~-~~D~~~~~~~~~~~~~~~~~~~~ 88 (255)
T 1fmc_A 11 GKCAIITGAGAGIGKEIAITFATA-GASVVVSDINADAANHVVDEIQQLGGQAFAC-RCDITSEQELSALADFAISKLGK 88 (255)
T ss_dssp TCEEEETTTTSHHHHHHHHHHHTT-TCEEEEEESCHHHHHHHHHHHHHTTCCEEEE-ECCTTCHHHHHHHHHHHHHHHSS
T ss_pred CCEEEEECCccHHHHHHHHHHHHC-CCEEEEEcCCHHHHHHHHHHHHHhCCceEEE-EcCCCCHHHHHHHHHHHHHhcCC
Confidence 4789999975 4556788888877 8887776543111000 0011122 4677787777666553 27
Q ss_pred CcEEEE
Q 010065 148 VGLVVV 153 (519)
Q Consensus 148 id~Vi~ 153 (519)
+|+||.
T Consensus 89 ~d~vi~ 94 (255)
T 1fmc_A 89 VDILVN 94 (255)
T ss_dssp CCEEEE
T ss_pred CCEEEE
Confidence 999987
No 314
>1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2
Probab=55.82 E-value=16 Score=34.03 Aligned_cols=70 Identities=21% Similarity=0.281 Sum_probs=42.5
Q ss_pred ccEEEEEeCC-hhHHHHHHHHHhcCCCcEEEEecCCCCCcC---------CCCCccccCCCCCCHHHHHHHHHHc-----
Q 010065 82 RVVVLVIGGG-GREHALCYALKRSHSCDAVFCAPGNAGISN---------SGDATCIPDLDVLDGDAVISFCRKW----- 146 (519)
Q Consensus 82 ~~~vliiG~g-~~~~~l~~~l~~~~g~~~v~~~~~~~~~~~---------~~~~~~v~~~d~~d~~~l~~~~~~~----- 146 (519)
.++++|+|++ +....++..|.+. |+++++++.+...... -.....+ ..|..|.+.+.+++++.
T Consensus 21 ~k~~lVTGas~gIG~~ia~~l~~~-G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~-~~Dl~~~~~v~~~~~~~~~~~g 98 (267)
T 1vl8_A 21 GRVALVTGGSRGLGFGIAQGLAEA-GCSVVVASRNLEEASEAAQKLTEKYGVETMAF-RCDVSNYEEVKKLLEAVKEKFG 98 (267)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHHHHCCCEEEE-ECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCEEEEECCCCHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHHHHhcCCeEEEE-EcCCCCHHHHHHHHHHHHHHcC
Confidence 4689999866 4556788888887 8888776543110000 0011122 46777777666655432
Q ss_pred CCcEEEE
Q 010065 147 SVGLVVV 153 (519)
Q Consensus 147 ~id~Vi~ 153 (519)
++|++|.
T Consensus 99 ~iD~lvn 105 (267)
T 1vl8_A 99 KLDTVVN 105 (267)
T ss_dssp CCCEEEE
T ss_pred CCCEEEE
Confidence 6898887
No 315
>1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2
Probab=55.74 E-value=8.9 Score=35.24 Aligned_cols=70 Identities=20% Similarity=0.182 Sum_probs=43.4
Q ss_pred ccEEEEEeCC-hhHHHHHHHHHhcCCCcEEEEecCCCCCcCC-C--CCccccCCCCCCHHHHHHHHHH-----cCCcEEE
Q 010065 82 RVVVLVIGGG-GREHALCYALKRSHSCDAVFCAPGNAGISNS-G--DATCIPDLDVLDGDAVISFCRK-----WSVGLVV 152 (519)
Q Consensus 82 ~~~vliiG~g-~~~~~l~~~l~~~~g~~~v~~~~~~~~~~~~-~--~~~~v~~~d~~d~~~l~~~~~~-----~~id~Vi 152 (519)
.++++|+|++ +....++..|.+. |++++.++.+....... . ....+ ..|..|.+.+.+++++ .++|+++
T Consensus 5 ~k~vlVTGas~giG~~ia~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~-~~D~~~~~~~~~~~~~~~~~~g~id~lv 82 (245)
T 1uls_A 5 DKAVLITGAAHGIGRATLELFAKE-GARLVACDIEEGPLREAAEAVGAHPV-VMDVADPASVERGFAEALAHLGRLDGVV 82 (245)
T ss_dssp TCEEEEESTTSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHTTTCEEE-ECCTTCHHHHHHHHHHHHHHHSSCCEEE
T ss_pred CCEEEEECCCCHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHcCCEEE-EecCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence 4689999976 4556788888877 89887775431110000 0 01223 5688887776665554 2699998
Q ss_pred E
Q 010065 153 V 153 (519)
Q Consensus 153 ~ 153 (519)
.
T Consensus 83 n 83 (245)
T 1uls_A 83 H 83 (245)
T ss_dssp E
T ss_pred E
Confidence 7
No 316
>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*
Probab=55.71 E-value=12 Score=34.59 Aligned_cols=71 Identities=11% Similarity=0.152 Sum_probs=41.9
Q ss_pred CccEEEEEeCCh---hHHHHHHHHHhcCCCcEEEEecCCCCCc-------CCC--CCccccCCCCCCHHHHHHHHHHc--
Q 010065 81 QRVVVLVIGGGG---REHALCYALKRSHSCDAVFCAPGNAGIS-------NSG--DATCIPDLDVLDGDAVISFCRKW-- 146 (519)
Q Consensus 81 ~~~~vliiG~g~---~~~~l~~~l~~~~g~~~v~~~~~~~~~~-------~~~--~~~~v~~~d~~d~~~l~~~~~~~-- 146 (519)
+.++++|+|+++ ....+++.|.+. |.++++++.+..... ... ....+ ..|..|.+.+.+++++.
T Consensus 6 ~~k~vlVTGasg~~GIG~~ia~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~-~~D~~~~~~v~~~~~~~~~ 83 (266)
T 3oig_A 6 EGRNIVVMGVANKRSIAWGIARSLHEA-GARLIFTYAGERLEKSVHELAGTLDRNDSIIL-PCDVTNDAEIETCFASIKE 83 (266)
T ss_dssp TTCEEEEECCCSTTSHHHHHHHHHHHT-TCEEEEEESSGGGHHHHHHHHHTSSSCCCEEE-ECCCSSSHHHHHHHHHHHH
T ss_pred CCCEEEEEcCCCCCcHHHHHHHHHHHC-CCEEEEecCchHHHHHHHHHHHhcCCCCceEE-eCCCCCHHHHHHHHHHHHH
Confidence 357899999652 567789999887 898877653311000 000 11222 46777655555554432
Q ss_pred ---CCcEEEE
Q 010065 147 ---SVGLVVV 153 (519)
Q Consensus 147 ---~id~Vi~ 153 (519)
++|.++.
T Consensus 84 ~~g~id~li~ 93 (266)
T 3oig_A 84 QVGVIHGIAH 93 (266)
T ss_dssp HHSCCCEEEE
T ss_pred HhCCeeEEEE
Confidence 6888887
No 317
>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A*
Probab=55.65 E-value=18 Score=33.50 Aligned_cols=71 Identities=25% Similarity=0.328 Sum_probs=43.4
Q ss_pred CccEEEEEeCC-hhHHHHHHHHHhcCCCcEEEEecCCCCCcC--------C-C-CCccccCCCCCCHHHHHHHHHHc---
Q 010065 81 QRVVVLVIGGG-GREHALCYALKRSHSCDAVFCAPGNAGISN--------S-G-DATCIPDLDVLDGDAVISFCRKW--- 146 (519)
Q Consensus 81 ~~~~vliiG~g-~~~~~l~~~l~~~~g~~~v~~~~~~~~~~~--------~-~-~~~~v~~~d~~d~~~l~~~~~~~--- 146 (519)
+.++++|+|++ +....+++.|.+. |.++++++.+...... . . ....+ ..|..|.+.+.+++++.
T Consensus 7 ~~k~~lVTGas~GIG~aia~~l~~~-G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~-~~Dv~~~~~v~~~~~~~~~~ 84 (265)
T 3lf2_A 7 SEAVAVVTGGSSGIGLATVELLLEA-GAAVAFCARDGERLRAAESALRQRFPGARLFAS-VCDVLDALQVRAFAEACERT 84 (265)
T ss_dssp TTCEEEEETCSSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHHHSTTCCEEEE-ECCTTCHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEE-eCCCCCHHHHHHHHHHHHHH
Confidence 35789999866 4566788888887 8988776543110000 0 0 01122 46777877666655542
Q ss_pred --CCcEEEE
Q 010065 147 --SVGLVVV 153 (519)
Q Consensus 147 --~id~Vi~ 153 (519)
++|+++.
T Consensus 85 ~g~id~lvn 93 (265)
T 3lf2_A 85 LGCASILVN 93 (265)
T ss_dssp HCSCSEEEE
T ss_pred cCCCCEEEE
Confidence 6898887
No 318
>2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A
Probab=55.62 E-value=22 Score=32.61 Aligned_cols=70 Identities=19% Similarity=0.196 Sum_probs=43.5
Q ss_pred ccEEEEEeCC-hhHHHHHHHHHhcCCCcEEEEecCCCCC--cC----CCCCccccCCCCCCHHHHHHHHHHc-----CCc
Q 010065 82 RVVVLVIGGG-GREHALCYALKRSHSCDAVFCAPGNAGI--SN----SGDATCIPDLDVLDGDAVISFCRKW-----SVG 149 (519)
Q Consensus 82 ~~~vliiG~g-~~~~~l~~~l~~~~g~~~v~~~~~~~~~--~~----~~~~~~v~~~d~~d~~~l~~~~~~~-----~id 149 (519)
.++++|+|++ +....+++.|.+. |.+++.++.+.... .. -.....+ ..|..|.+.+.+++++. ++|
T Consensus 4 ~k~vlVTGas~giG~~ia~~l~~~-G~~V~~~~r~~~~~~~~~l~~~~~~~~~~-~~D~~~~~~v~~~~~~~~~~~g~id 81 (255)
T 2q2v_A 4 GKTALVTGSTSGIGLGIAQVLARA-GANIVLNGFGDPAPALAEIARHGVKAVHH-PADLSDVAQIEALFALAEREFGGVD 81 (255)
T ss_dssp TCEEEESSCSSHHHHHHHHHHHHT-TCEEEEECSSCCHHHHHHHHTTSCCEEEE-CCCTTSHHHHHHHHHHHHHHHSSCS
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHC-CCEEEEEeCCchHHHHHHHHhcCCceEEE-eCCCCCHHHHHHHHHHHHHHcCCCC
Confidence 4689999875 4566788888887 88877765332100 00 0011222 56888877776665532 799
Q ss_pred EEEE
Q 010065 150 LVVV 153 (519)
Q Consensus 150 ~Vi~ 153 (519)
+++.
T Consensus 82 ~lv~ 85 (255)
T 2q2v_A 82 ILVN 85 (255)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 9987
No 319
>1p9l_A Dihydrodipicolinate reductase; oxidoreductase, lysine biosynthesis, NADH binding specificity, TB structural genomics consortium; HET: NAD PDC PG4; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.3 d.81.1.3 PDB: 1c3v_A* 1yl5_A 1yl7_A* 1yl6_A*
Probab=55.57 E-value=62 Score=29.82 Aligned_cols=30 Identities=17% Similarity=0.136 Sum_probs=21.1
Q ss_pred cEEEEEeC-ChhHHHHHHHHHhcCCCcEEEE
Q 010065 83 VVVLVIGG-GGREHALCYALKRSHSCDAVFC 112 (519)
Q Consensus 83 ~~vliiG~-g~~~~~l~~~l~~~~g~~~v~~ 112 (519)
+||.|+|+ |.....++..+.+..+++.+.+
T Consensus 1 mkV~V~Ga~G~mG~~i~~~~~~~~~~elva~ 31 (245)
T 1p9l_A 1 MRVGVLGAKGKVGTTMVRAVAAADDLTLSAE 31 (245)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHCTTCEEEEE
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCCEEEEE
Confidence 48999996 7555667777766557776654
No 320
>4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti}
Probab=55.55 E-value=5.2 Score=37.89 Aligned_cols=71 Identities=24% Similarity=0.339 Sum_probs=43.4
Q ss_pred CccEEEEEeCC-hhHHHHHHHHHhcCCCcEEEEecCCCCCcCC--------CCC-ccccCCCCCCHHHHHHHHHHc----
Q 010065 81 QRVVVLVIGGG-GREHALCYALKRSHSCDAVFCAPGNAGISNS--------GDA-TCIPDLDVLDGDAVISFCRKW---- 146 (519)
Q Consensus 81 ~~~~vliiG~g-~~~~~l~~~l~~~~g~~~v~~~~~~~~~~~~--------~~~-~~v~~~d~~d~~~l~~~~~~~---- 146 (519)
+.++++|+|++ +....++..|.+. |.++++++.+....... ... ..+ ..|..|.+.+.+++++.
T Consensus 32 ~gk~~lVTGas~GIG~aia~~la~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~-~~Dv~d~~~v~~~~~~~~~~~ 109 (281)
T 4dry_A 32 EGRIALVTGGGTGVGRGIAQALSAE-GYSVVITGRRPDVLDAAAGEIGGRTGNIVRAV-VCDVGDPDQVAALFAAVRAEF 109 (281)
T ss_dssp --CEEEETTTTSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHHHHSSCEEEE-ECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHC-CCEEEEEECCHHHHHHHHHHHHhcCCCeEEEE-EcCCCCHHHHHHHHHHHHHHc
Confidence 34678888865 4566788888887 89887775432110000 001 223 56888877776666543
Q ss_pred -CCcEEEE
Q 010065 147 -SVGLVVV 153 (519)
Q Consensus 147 -~id~Vi~ 153 (519)
++|+++.
T Consensus 110 g~iD~lvn 117 (281)
T 4dry_A 110 ARLDLLVN 117 (281)
T ss_dssp SCCSEEEE
T ss_pred CCCCEEEE
Confidence 7999987
No 321
>1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A*
Probab=55.47 E-value=8.1 Score=35.95 Aligned_cols=71 Identities=20% Similarity=0.150 Sum_probs=44.1
Q ss_pred CccEEEEEeCC-hhHHHHHHHHHhcCCCcEEEEecCCCCCcC----C-CCCccccCCCCCCHHHHHHHHHHc-----CCc
Q 010065 81 QRVVVLVIGGG-GREHALCYALKRSHSCDAVFCAPGNAGISN----S-GDATCIPDLDVLDGDAVISFCRKW-----SVG 149 (519)
Q Consensus 81 ~~~~vliiG~g-~~~~~l~~~l~~~~g~~~v~~~~~~~~~~~----~-~~~~~v~~~d~~d~~~l~~~~~~~-----~id 149 (519)
..++++|+|++ +....+++.|.+. |++++.++.+...... . .....+ ..|..|.+.+.+++++. ++|
T Consensus 6 ~~k~vlVTGas~gIG~~ia~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~-~~D~~~~~~v~~~~~~~~~~~g~iD 83 (260)
T 1nff_A 6 TGKVALVSGGARGMGASHVRAMVAE-GAKVVFGDILDEEGKAMAAELADAARYV-HLDVTQPAQWKAAVDTAVTAFGGLH 83 (260)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHTGGGEEEE-ECCTTCHHHHHHHHHHHHHHHSCCC
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHhhcCceEE-EecCCCHHHHHHHHHHHHHHcCCCC
Confidence 34689999966 4556788888887 8988776543111000 0 001122 56888877776665532 799
Q ss_pred EEEE
Q 010065 150 LVVV 153 (519)
Q Consensus 150 ~Vi~ 153 (519)
+++.
T Consensus 84 ~lv~ 87 (260)
T 1nff_A 84 VLVN 87 (260)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 9997
No 322
>3tsa_A SPNG, NDP-rhamnosyltransferase; glycosyltransferase; HET: GLC; 1.70A {Saccharopolyspora spinosa} PDB: 3uyk_A* 3uyl_A*
Probab=55.41 E-value=13 Score=36.57 Aligned_cols=38 Identities=13% Similarity=0.207 Sum_probs=24.5
Q ss_pred HHHHHHHHHHcCCcEEEECCChhhHHHHHHHHHHCCCCeeC
Q 010065 136 GDAVISFCRKWSVGLVVVGPEAPLVSGLANKLVKAGIPTFG 176 (519)
Q Consensus 136 ~~~l~~~~~~~~id~Vi~g~E~~~~~~~a~~le~~gip~~g 176 (519)
...+.+++++.++|+|+... .... + ....+.+|+|++.
T Consensus 103 ~~~l~~~l~~~~PD~Vv~~~-~~~~-~-~~aa~~~giP~v~ 140 (391)
T 3tsa_A 103 LPEYLRLAEAWRPSVLLVDV-CALI-G-RVLGGLLDLPVVL 140 (391)
T ss_dssp HHHHHHHHHHHCCSEEEEET-TCHH-H-HHHHHHTTCCEEE
T ss_pred HHHHHHHHHhcCCCEEEeCc-chhH-H-HHHHHHhCCCEEE
Confidence 45667788889999998842 1111 1 2235678999863
No 323
>3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp}
Probab=55.33 E-value=15 Score=34.39 Aligned_cols=33 Identities=18% Similarity=0.270 Sum_probs=25.5
Q ss_pred CccEEEEEeCC-hhHHHHHHHHHhcCCCcEEEEec
Q 010065 81 QRVVVLVIGGG-GREHALCYALKRSHSCDAVFCAP 114 (519)
Q Consensus 81 ~~~~vliiG~g-~~~~~l~~~l~~~~g~~~v~~~~ 114 (519)
..++++|+|++ +....++..|.+. |.++++++.
T Consensus 12 ~gk~vlVTGas~gIG~~ia~~l~~~-G~~V~~~~r 45 (278)
T 3sx2_A 12 TGKVAFITGAARGQGRAHAVRLAAD-GADIIAVDL 45 (278)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHT-TCEEEEEEC
T ss_pred CCCEEEEECCCChHHHHHHHHHHHC-CCeEEEEec
Confidence 45789999976 4566788999887 998887754
No 324
>2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A*
Probab=55.31 E-value=8.3 Score=35.41 Aligned_cols=71 Identities=21% Similarity=0.315 Sum_probs=44.4
Q ss_pred CccEEEEEeCC-hhHHHHHHHHHhcCCCcEEEEecCCCCCcCC-----CCC-ccccCCCCCCHHHHHHHHHH----cCCc
Q 010065 81 QRVVVLVIGGG-GREHALCYALKRSHSCDAVFCAPGNAGISNS-----GDA-TCIPDLDVLDGDAVISFCRK----WSVG 149 (519)
Q Consensus 81 ~~~~vliiG~g-~~~~~l~~~l~~~~g~~~v~~~~~~~~~~~~-----~~~-~~v~~~d~~d~~~l~~~~~~----~~id 149 (519)
+.++++|+|++ +....++..|.+. |++++.++.+....... ... ..+ ..|..|.+.+.+++++ .++|
T Consensus 10 ~~k~vlITGasggiG~~la~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~-~~D~~~~~~~~~~~~~~~~~~~id 87 (254)
T 2wsb_A 10 DGACAAVTGAGSGIGLEICRAFAAS-GARLILIDREAAALDRAAQELGAAVAARI-VADVTDAEAMTAAAAEAEAVAPVS 87 (254)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHGGGEEEEE-ECCTTCHHHHHHHHHHHHHHSCCC
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHhcccceeEE-EEecCCHHHHHHHHHHHHhhCCCc
Confidence 35789999976 3556788888887 88887775431110000 001 122 5688887777766654 4799
Q ss_pred EEEE
Q 010065 150 LVVV 153 (519)
Q Consensus 150 ~Vi~ 153 (519)
++|.
T Consensus 88 ~li~ 91 (254)
T 2wsb_A 88 ILVN 91 (254)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 9987
No 325
>1yde_A Retinal dehydrogenase/reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC; 2.40A {Homo sapiens} SCOP: c.2.1.2
Probab=55.28 E-value=14 Score=34.47 Aligned_cols=71 Identities=28% Similarity=0.345 Sum_probs=44.6
Q ss_pred CccEEEEEeCC-hhHHHHHHHHHhcCCCcEEEEecCCCCCc----CCCCCccccCCCCCCHHHHHHHHHHc-----CCcE
Q 010065 81 QRVVVLVIGGG-GREHALCYALKRSHSCDAVFCAPGNAGIS----NSGDATCIPDLDVLDGDAVISFCRKW-----SVGL 150 (519)
Q Consensus 81 ~~~~vliiG~g-~~~~~l~~~l~~~~g~~~v~~~~~~~~~~----~~~~~~~v~~~d~~d~~~l~~~~~~~-----~id~ 150 (519)
+.++++|+|++ +....++..|.+. |++++.++.+..... .......+ ..|..|.+.+.+++++. ++|+
T Consensus 8 ~~k~vlVTGas~gIG~~ia~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~-~~Dv~d~~~v~~~~~~~~~~~g~iD~ 85 (270)
T 1yde_A 8 AGKVVVVTGGGRGIGAGIVRAFVNS-GARVVICDKDESGGRALEQELPGAVFI-LCDVTQEDDVKTLVSETIRRFGRLDC 85 (270)
T ss_dssp TTCEEEEETCSSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHCTTEEEE-ECCTTSHHHHHHHHHHHHHHHSCCCE
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHhcCCeEE-EcCCCCHHHHHHHHHHHHHHcCCCCE
Confidence 35789999976 4556788888887 888877653311100 00011223 56888877776665542 7999
Q ss_pred EEE
Q 010065 151 VVV 153 (519)
Q Consensus 151 Vi~ 153 (519)
+|.
T Consensus 86 lv~ 88 (270)
T 1yde_A 86 VVN 88 (270)
T ss_dssp EEE
T ss_pred EEE
Confidence 997
No 326
>3i23_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.30A {Enterococcus faecalis} PDB: 3fd8_A* 3hnp_A
Probab=55.20 E-value=8.5 Score=37.66 Aligned_cols=144 Identities=15% Similarity=0.062 Sum_probs=71.1
Q ss_pred ccEEEEEeCChhHH-HHHHHHHhcCCCcEEEEecCCCCCcCCCCCccccCC-CCCCHHHHHHHHHHcCCcEEEECCChhh
Q 010065 82 RVVVLVIGGGGREH-ALCYALKRSHSCDAVFCAPGNAGISNSGDATCIPDL-DVLDGDAVISFCRKWSVGLVVVGPEAPL 159 (519)
Q Consensus 82 ~~~vliiG~g~~~~-~l~~~l~~~~g~~~v~~~~~~~~~~~~~~~~~v~~~-d~~d~~~l~~~~~~~~id~Vi~g~E~~~ 159 (519)
+++|.|||.|.... ..+..+++..+++++.+.+.+ .............. -..+.++++ ...++|+|+...-...
T Consensus 2 ~~rvgiiG~G~~g~~~~~~~l~~~~~~~l~av~d~~-~~~~~a~~~~~~~~~~~~~~~~ll---~~~~~D~V~i~tp~~~ 77 (349)
T 3i23_A 2 TVKMGFIGFGKSANRYHLPYVMIRETLEVKTIFDLH-VNEKAAAPFKEKGVNFTADLNELL---TDPEIELITICTPAHT 77 (349)
T ss_dssp CEEEEEECCSHHHHHTTHHHHTTCTTEEEEEEECTT-CCHHHHHHHHTTTCEEESCTHHHH---SCTTCCEEEECSCGGG
T ss_pred eeEEEEEccCHHHHHHHHHHHhhCCCeEEEEEECCC-HHHHHHHhhCCCCCeEECCHHHHh---cCCCCCEEEEeCCcHH
Confidence 47899999996432 234445555577776554433 11111000000000 123445543 3457999998544433
Q ss_pred HHHHHHHHHHCCCCeeCCcHHHHHHhcCHHHHHHHHHHcCCCCCCeee--cC-CHHHHHHHHH--HhCCCEEEEeC
Q 010065 160 VSGLANKLVKAGIPTFGPSSEAAALEGSKNFMKNLCDKYGIPTAKYKT--FT-DPNAAKQYIQ--EEGAPIVVKAD 230 (519)
Q Consensus 160 ~~~~a~~le~~gip~~g~~~~~~~~~~dK~~~k~~l~~~Gi~~p~~~~--v~-~~~~~~~~~~--~~g~P~VvKP~ 230 (519)
-..++..+-+.|.+++.-.|-+... .+=..+.+++++.|+..--... .. ....+.+.++ .+|-+..+.-.
T Consensus 78 h~~~~~~al~aGk~Vl~EKP~a~~~-~e~~~l~~~a~~~g~~~~v~~~~r~~p~~~~~~~~i~~g~iG~i~~~~~~ 152 (349)
T 3i23_A 78 HYDLAKQAILAGKSVIVEKPFCDTL-EHAEELFALGQEKGVVVMPYQNRRFDGDYLAMKQVVEQGFLGEINEVETH 152 (349)
T ss_dssp HHHHHHHHHHTTCEEEECSCSCSSH-HHHHHHHHHHHHTTCCEEECCGGGGCHHHHHHHHHHHHTTTCSEEEEEEE
T ss_pred HHHHHHHHHHcCCEEEEECCCcCCH-HHHHHHHHHHHHcCCeEEEEecccCCHHHHHHHHHHhcCCCCCEEEEEEE
Confidence 3344555566888877433322211 1223455677888876522111 11 1234555554 46666666543
No 327
>4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum}
Probab=55.06 E-value=17 Score=34.09 Aligned_cols=33 Identities=18% Similarity=0.243 Sum_probs=24.5
Q ss_pred ccEEEEEeCC-hhHHHHHHHHHhcCCCcEEEEecC
Q 010065 82 RVVVLVIGGG-GREHALCYALKRSHSCDAVFCAPG 115 (519)
Q Consensus 82 ~~~vliiG~g-~~~~~l~~~l~~~~g~~~v~~~~~ 115 (519)
.++++|+|++ +....++..|.+. |.++++++.+
T Consensus 33 gk~~lVTGas~GIG~aia~~la~~-G~~V~~~~r~ 66 (275)
T 4imr_A 33 GRTALVTGSSRGIGAAIAEGLAGA-GAHVILHGVK 66 (275)
T ss_dssp TCEEEETTCSSHHHHHHHHHHHHT-TCEEEEEESS
T ss_pred CCEEEEECCCCHHHHHHHHHHHHC-CCEEEEEcCC
Confidence 4678888865 4556788999887 8988777543
No 328
>1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2
Probab=55.02 E-value=14 Score=34.04 Aligned_cols=69 Identities=25% Similarity=0.366 Sum_probs=42.5
Q ss_pred cEEEEEeCC-hhHHHHHHHHHhcCCCcEEEEecCCCCCcC--------CCCCccccCCCCCCHHHHHHHHHHc-----CC
Q 010065 83 VVVLVIGGG-GREHALCYALKRSHSCDAVFCAPGNAGISN--------SGDATCIPDLDVLDGDAVISFCRKW-----SV 148 (519)
Q Consensus 83 ~~vliiG~g-~~~~~l~~~l~~~~g~~~v~~~~~~~~~~~--------~~~~~~v~~~d~~d~~~l~~~~~~~-----~i 148 (519)
++++|+|++ +....++..|.+. |++++.++.+...... -.....+ ..|..|.+.+.+++++. ++
T Consensus 3 k~vlVTGas~gIG~~ia~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~-~~D~~~~~~v~~~~~~~~~~~g~i 80 (256)
T 1geg_A 3 KVALVTGAGQGIGKAIALRLVKD-GFAVAIADYNDATAKAVASEINQAGGHAVAV-KVDVSDRDQVFAAVEQARKTLGGF 80 (256)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHHTTCCEEEE-ECCTTSHHHHHHHHHHHHHHTTCC
T ss_pred CEEEEECCCChHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHHHhcCCcEEEE-EecCCCHHHHHHHHHHHHHHhCCC
Confidence 578999866 4556788888887 8887776533110000 0011222 56888877776665532 78
Q ss_pred cEEEE
Q 010065 149 GLVVV 153 (519)
Q Consensus 149 d~Vi~ 153 (519)
|.+|.
T Consensus 81 d~lv~ 85 (256)
T 1geg_A 81 DVIVN 85 (256)
T ss_dssp CEEEE
T ss_pred CEEEE
Confidence 99887
No 329
>1y8q_A Ubiquitin-like 1 activating enzyme E1A; SUMO, heterodimer, UBL, ligase; HET: ATP; 2.25A {Homo sapiens} PDB: 1y8r_A* 3kyc_A* 3kyd_A*
Probab=55.00 E-value=33 Score=33.50 Aligned_cols=114 Identities=12% Similarity=0.053 Sum_probs=57.9
Q ss_pred ccEEEEEeCChhHHHHHHHHHhcCCCcEEEEe-cCCCCCcCCCCCcccc--CCCCCCHHHHHHHHHHcCCcEEEEC-CCh
Q 010065 82 RVVVLVIGGGGREHALCYALKRSHSCDAVFCA-PGNAGISNSGDATCIP--DLDVLDGDAVISFCRKWSVGLVVVG-PEA 157 (519)
Q Consensus 82 ~~~vliiG~g~~~~~l~~~l~~~~g~~~v~~~-~~~~~~~~~~~~~~v~--~~d~~d~~~l~~~~~~~~id~Vi~g-~E~ 157 (519)
..+|+|+|.|+...++++.|... |+..+.+. ++......+.....+. .+.....+.+.+.+++.++++-+.. .+.
T Consensus 36 ~~~VlivG~GGlG~~ia~~La~~-Gvg~itlvD~d~V~~sNL~rq~~~~~~diG~~Ka~~~~~~l~~lnp~v~v~~~~~~ 114 (346)
T 1y8q_A 36 ASRVLLVGLKGLGAEIAKNLILA-GVKGLTMLDHEQVTPEDPGAQFLIRTGSVGRNRAEASLERAQNLNPMVDVKVDTED 114 (346)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHH-TCSEEEEECCCBCCSSCGGGCTTSCSSCTTSBHHHHHHHHHHHTCTTSEEEEECSC
T ss_pred CCeEEEECCCHHHHHHHHHHHHc-CCCEEEEEECCCcchhhCCCCCccccccCcCCHHHHHHHHHHhHCCCeEEEEEecc
Confidence 46899999999888889999887 88766554 3321111111100000 1112236677777777776644431 111
Q ss_pred hhHHHHHHHHHHCCCCeeCCcHHHHHHhcCHHHHHHHHHHcCCCC
Q 010065 158 PLVSGLANKLVKAGIPTFGPSSEAAALEGSKNFMKNLCDKYGIPT 202 (519)
Q Consensus 158 ~~~~~~a~~le~~gip~~g~~~~~~~~~~dK~~~k~~l~~~Gi~~ 202 (519)
.. ....+.+....+-+...+.... +....+.+.++++|.
T Consensus 115 ~~-~~~~~~~~~~dvVv~~~d~~~~-----r~~ln~~~~~~~ip~ 153 (346)
T 1y8q_A 115 IE-KKPESFFTQFDAVCLTCCSRDV-----IVKVDQICHKNSIKF 153 (346)
T ss_dssp GG-GCCHHHHTTCSEEEEESCCHHH-----HHHHHHHHHHTTCEE
T ss_pred cC-cchHHHhcCCCEEEEcCCCHHH-----HHHHHHHHHHcCCCE
Confidence 10 0012234444544433332222 334555666777654
No 330
>2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain dehydrogenase/reductase, steroid metabolism, LIP metabolism, structural genomics; HET: NAD; 2.00A {Homo sapiens}
Probab=54.96 E-value=13 Score=34.30 Aligned_cols=70 Identities=21% Similarity=0.295 Sum_probs=42.9
Q ss_pred ccEEEEEeCC-hhHHHHHHHHHhcCCCcEEEEecCCCCCc----CC-----------CCCccccCCCCCCHHHHHHHHHH
Q 010065 82 RVVVLVIGGG-GREHALCYALKRSHSCDAVFCAPGNAGIS----NS-----------GDATCIPDLDVLDGDAVISFCRK 145 (519)
Q Consensus 82 ~~~vliiG~g-~~~~~l~~~l~~~~g~~~v~~~~~~~~~~----~~-----------~~~~~v~~~d~~d~~~l~~~~~~ 145 (519)
.++++|+|++ +....++..|.+. |++++.++.+..... .. .....+ ..|..|.+.+.++++.
T Consensus 7 ~k~vlITGasggiG~~la~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~D~~~~~~~~~~~~~ 84 (264)
T 2pd6_A 7 SALALVTGAGSGIGRAVSVRLAGE-GATVAACDLDRAAAQETVRLLGGPGSKEGPPRGNHAAF-QADVSEARAARCLLEQ 84 (264)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHT-TCEEEEEESSHHHHHHHHHTC------------CCEEE-ECCTTSHHHHHHHHHH
T ss_pred CCEEEEECCCChHHHHHHHHHHHC-CCEEEEEeCChHHHHHHHHHHHhcCccccccCcceEEE-EecCCCHHHHHHHHHH
Confidence 4689999976 4556788888877 888877753311000 00 111222 5688887777666654
Q ss_pred c-----CC-cEEEE
Q 010065 146 W-----SV-GLVVV 153 (519)
Q Consensus 146 ~-----~i-d~Vi~ 153 (519)
. ++ |+||.
T Consensus 85 ~~~~~g~i~d~vi~ 98 (264)
T 2pd6_A 85 VQACFSRPPSVVVS 98 (264)
T ss_dssp HHHHHSSCCSEEEE
T ss_pred HHHHhCCCCeEEEE
Confidence 3 45 99987
No 331
>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A
Probab=54.92 E-value=8.6 Score=35.68 Aligned_cols=71 Identities=17% Similarity=0.253 Sum_probs=42.7
Q ss_pred CccEEEEEeCC-hhHHHHHHHHHhcCCCcEEEEecCCCCCcCC-----CCCccccCCCCCCHHHHHHHHHHc-----CCc
Q 010065 81 QRVVVLVIGGG-GREHALCYALKRSHSCDAVFCAPGNAGISNS-----GDATCIPDLDVLDGDAVISFCRKW-----SVG 149 (519)
Q Consensus 81 ~~~~vliiG~g-~~~~~l~~~l~~~~g~~~v~~~~~~~~~~~~-----~~~~~v~~~d~~d~~~l~~~~~~~-----~id 149 (519)
+.++++|+|++ +....+++.|.+. |.++++++.+....... .....+ ..|..|.+.+.+++++. ++|
T Consensus 7 ~gk~~lVTGas~gIG~a~a~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~-~~Dv~~~~~v~~~~~~~~~~~g~id 84 (255)
T 4eso_A 7 QGKKAIVIGGTHGMGLATVRRLVEG-GAEVLLTGRNESNIARIREEFGPRVHAL-RSDIADLNEIAVLGAAAGQTLGAID 84 (255)
T ss_dssp TTCEEEEETCSSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHGGGEEEE-ECCTTCHHHHHHHHHHHHHHHSSEE
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHhCCcceEE-EccCCCHHHHHHHHHHHHHHhCCCC
Confidence 35789999976 4566788999887 89887775431111000 011122 46777766666555432 688
Q ss_pred EEEE
Q 010065 150 LVVV 153 (519)
Q Consensus 150 ~Vi~ 153 (519)
.++.
T Consensus 85 ~lv~ 88 (255)
T 4eso_A 85 LLHI 88 (255)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 8876
No 332
>2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A*
Probab=54.87 E-value=17 Score=33.90 Aligned_cols=70 Identities=13% Similarity=0.087 Sum_probs=42.9
Q ss_pred ccEEEEEeCC---hhHHHHHHHHHhcCCCcEEEEecCCCCC---cC----CCCCccccCCCCCCHHHHHHHHHHc-----
Q 010065 82 RVVVLVIGGG---GREHALCYALKRSHSCDAVFCAPGNAGI---SN----SGDATCIPDLDVLDGDAVISFCRKW----- 146 (519)
Q Consensus 82 ~~~vliiG~g---~~~~~l~~~l~~~~g~~~v~~~~~~~~~---~~----~~~~~~v~~~d~~d~~~l~~~~~~~----- 146 (519)
.++++|+|++ +....++..|.+. |.+++.++.+.... .. ......+ ..|..|.+.+.+++++.
T Consensus 6 ~k~vlVTGas~~~gIG~~~a~~l~~~-G~~V~~~~r~~~~~~~~~~l~~~~~~~~~~-~~D~~~~~~v~~~~~~~~~~~g 83 (275)
T 2pd4_A 6 GKKGLIVGVANNKSIAYGIAQSCFNQ-GATLAFTYLNESLEKRVRPIAQELNSPYVY-ELDVSKEEHFKSLYNSVKKDLG 83 (275)
T ss_dssp TCEEEEECCCSTTSHHHHHHHHHHTT-TCEEEEEESSTTTHHHHHHHHHHTTCCCEE-ECCTTCHHHHHHHHHHHHHHTS
T ss_pred CCEEEEECCCCCCcHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHHHhcCCcEEE-EcCCCCHHHHHHHHHHHHHHcC
Confidence 4689999974 5667789999877 88887775432100 00 0011122 46777776666655542
Q ss_pred CCcEEEE
Q 010065 147 SVGLVVV 153 (519)
Q Consensus 147 ~id~Vi~ 153 (519)
++|+++.
T Consensus 84 ~id~lv~ 90 (275)
T 2pd4_A 84 SLDFIVH 90 (275)
T ss_dssp CEEEEEE
T ss_pred CCCEEEE
Confidence 6788876
No 333
>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} SCOP: c.2.1.0
Probab=54.73 E-value=8.9 Score=35.17 Aligned_cols=71 Identities=11% Similarity=0.193 Sum_probs=45.9
Q ss_pred CccEEEEEeCC-hhHHHHHHHHHhcCCCcEEEEecCCCCCcC----C-CCCccccCCCCCCHHHHHHHHHHc-CCcEEEE
Q 010065 81 QRVVVLVIGGG-GREHALCYALKRSHSCDAVFCAPGNAGISN----S-GDATCIPDLDVLDGDAVISFCRKW-SVGLVVV 153 (519)
Q Consensus 81 ~~~~vliiG~g-~~~~~l~~~l~~~~g~~~v~~~~~~~~~~~----~-~~~~~v~~~d~~d~~~l~~~~~~~-~id~Vi~ 153 (519)
+.++|+|+|++ +....++..|.+. |.+++.++.+...... . .....+ ..|..+.+.+.++.++. ++|+++.
T Consensus 13 ~~k~vlVTGas~gIG~~~a~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~-~~D~~~~~~~~~~~~~~~~id~li~ 90 (249)
T 3f9i_A 13 TGKTSLITGASSGIGSAIARLLHKL-GSKVIISGSNEEKLKSLGNALKDNYTIE-VCNLANKEECSNLISKTSNLDILVC 90 (249)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHCSSEEEE-ECCTTSHHHHHHHHHTCSCCSEEEE
T ss_pred CCCEEEEECCCChHHHHHHHHHHHC-CCEEEEEcCCHHHHHHHHHHhccCccEE-EcCCCCHHHHHHHHHhcCCCCEEEE
Confidence 45789999976 4556788888877 8888776543111000 0 011112 46888888888887765 6899887
No 334
>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A*
Probab=54.72 E-value=9.7 Score=35.22 Aligned_cols=70 Identities=24% Similarity=0.195 Sum_probs=42.8
Q ss_pred ccEEEEEeCC-hhHHHHHHHHHh-cCCCcEEEEecCCCCCcC--------CCCCccccCCCCCCHHHHHHHHHHc-----
Q 010065 82 RVVVLVIGGG-GREHALCYALKR-SHSCDAVFCAPGNAGISN--------SGDATCIPDLDVLDGDAVISFCRKW----- 146 (519)
Q Consensus 82 ~~~vliiG~g-~~~~~l~~~l~~-~~g~~~v~~~~~~~~~~~--------~~~~~~v~~~d~~d~~~l~~~~~~~----- 146 (519)
.++++|+|++ +....++..|.+ . |.+++++..+...... ......+ ..|..|.+.+.+++++.
T Consensus 4 ~k~vlITGasggIG~~~a~~L~~~~-g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~-~~Dl~~~~~~~~~~~~~~~~~g 81 (276)
T 1wma_A 4 IHVALVTGGNKGIGLAIVRDLCRLF-SGDVVLTARDVTRGQAAVQQLQAEGLSPRFH-QLDIDDLQSIRALRDFLRKEYG 81 (276)
T ss_dssp CCEEEESSCSSHHHHHHHHHHHHHS-SSEEEEEESSHHHHHHHHHHHHHTTCCCEEE-ECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHhc-CCeEEEEeCChHHHHHHHHHHHhcCCeeEEE-ECCCCCHHHHHHHHHHHHHhcC
Confidence 4688999866 355678888887 6 8887776533110000 0011223 56778877776666543
Q ss_pred CCcEEEE
Q 010065 147 SVGLVVV 153 (519)
Q Consensus 147 ~id~Vi~ 153 (519)
++|+||.
T Consensus 82 ~id~li~ 88 (276)
T 1wma_A 82 GLDVLVN 88 (276)
T ss_dssp SEEEEEE
T ss_pred CCCEEEE
Confidence 7898886
No 335
>4hv4_A UDP-N-acetylmuramate--L-alanine ligase; MURC, yersinia pestis peptidoglycan synthesis; HET: AMP; 2.25A {Yersinia pestis} PDB: 2f00_A
Probab=54.69 E-value=12 Score=38.70 Aligned_cols=33 Identities=12% Similarity=0.094 Sum_probs=25.0
Q ss_pred CccEEEEEeCChhHHH-HHHHHHhcCCCcEEEEec
Q 010065 81 QRVVVLVIGGGGREHA-LCYALKRSHSCDAVFCAP 114 (519)
Q Consensus 81 ~~~~vliiG~g~~~~~-l~~~l~~~~g~~~v~~~~ 114 (519)
+.++|+++|.|+.... +++.|++. |+++...|.
T Consensus 21 ~~~~v~viGiG~sG~s~~A~~l~~~-G~~V~~~D~ 54 (494)
T 4hv4_A 21 RVRHIHFVGIGGAGMGGIAEVLANE-GYQISGSDL 54 (494)
T ss_dssp -CCEEEEETTTSTTHHHHHHHHHHT-TCEEEEECS
T ss_pred cCCEEEEEEEcHhhHHHHHHHHHhC-CCeEEEEEC
Confidence 4579999999976653 68888877 998877653
No 336
>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis}
Probab=54.60 E-value=12 Score=34.71 Aligned_cols=71 Identities=17% Similarity=0.269 Sum_probs=43.7
Q ss_pred CccEEEEEeCC-hhHHHHHHHHHhcCCCcEEEEecCCCCCcC--------CCCCccccCCCCCCHHHHHHHHHHc-----
Q 010065 81 QRVVVLVIGGG-GREHALCYALKRSHSCDAVFCAPGNAGISN--------SGDATCIPDLDVLDGDAVISFCRKW----- 146 (519)
Q Consensus 81 ~~~~vliiG~g-~~~~~l~~~l~~~~g~~~v~~~~~~~~~~~--------~~~~~~v~~~d~~d~~~l~~~~~~~----- 146 (519)
+.++++|+|++ +....+++.|.+. |.++++++.+...... ......+ ..|..|.+.+.+++++.
T Consensus 11 ~~k~vlVTGas~gIG~~ia~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~-~~Dv~d~~~v~~~~~~~~~~~g 88 (256)
T 3gaf_A 11 NDAVAIVTGAAAGIGRAIAGTFAKA-GASVVVTDLKSEGAEAVAAAIRQAGGKAIGL-ECNVTDEQHREAVIKAALDQFG 88 (256)
T ss_dssp TTCEEEECSCSSHHHHHHHHHHHHH-TCEEEEEESSHHHHHHHHHHHHHTTCCEEEE-ECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHHHhcCCcEEEE-ECCCCCHHHHHHHHHHHHHHcC
Confidence 35789999866 4556788888887 8988777543111000 0011222 56777877666655542
Q ss_pred CCcEEEE
Q 010065 147 SVGLVVV 153 (519)
Q Consensus 147 ~id~Vi~ 153 (519)
++|+++.
T Consensus 89 ~id~lv~ 95 (256)
T 3gaf_A 89 KITVLVN 95 (256)
T ss_dssp CCCEEEE
T ss_pred CCCEEEE
Confidence 7898887
No 337
>1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A
Probab=54.54 E-value=15 Score=33.96 Aligned_cols=71 Identities=17% Similarity=0.139 Sum_probs=43.2
Q ss_pred CccEEEEEeCC-hhHHHHHHHHHhcCCCcEEEEecCCCCCcC--------CCCCccccCCCCCCHHHHHHHHHH------
Q 010065 81 QRVVVLVIGGG-GREHALCYALKRSHSCDAVFCAPGNAGISN--------SGDATCIPDLDVLDGDAVISFCRK------ 145 (519)
Q Consensus 81 ~~~~vliiG~g-~~~~~l~~~l~~~~g~~~v~~~~~~~~~~~--------~~~~~~v~~~d~~d~~~l~~~~~~------ 145 (519)
..++++|+|++ +....++..|.+. |++++.++.+...... ......+ ..|..+.+.+.+++++
T Consensus 13 ~~k~vlITGasggiG~~la~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~-~~D~~~~~~~~~~~~~~~~~~~ 90 (266)
T 1xq1_A 13 KAKTVLVTGGTKGIGHAIVEEFAGF-GAVIHTCARNEYELNECLSKWQKKGFQVTGS-VCDASLRPEREKLMQTVSSMFG 90 (266)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHHTTCCEEEE-ECCTTSHHHHHHHHHHHHHHHT
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHHHhcCCeeEEE-ECCCCCHHHHHHHHHHHHHHhC
Confidence 35789999866 4556788888877 8887776543110000 0011122 4677777666666543
Q ss_pred cCCcEEEE
Q 010065 146 WSVGLVVV 153 (519)
Q Consensus 146 ~~id~Vi~ 153 (519)
.++|++|.
T Consensus 91 ~~id~li~ 98 (266)
T 1xq1_A 91 GKLDILIN 98 (266)
T ss_dssp TCCSEEEE
T ss_pred CCCcEEEE
Confidence 47898886
No 338
>3h5n_A MCCB protein; ubiquitin-activating enzyme, microcin, protein structure, MCCC7, peptide antibiotics, N-P bond formation, transferase; HET: ATP; 1.90A {Escherichia coli} PDB: 3h5r_A 3h9g_A 3h9j_A* 3h9q_A 3h5a_A
Probab=54.49 E-value=84 Score=30.65 Aligned_cols=32 Identities=19% Similarity=0.323 Sum_probs=26.0
Q ss_pred ccEEEEEeCChhHHHHHHHHHhcCCCcEEEEec
Q 010065 82 RVVVLVIGGGGREHALCYALKRSHSCDAVFCAP 114 (519)
Q Consensus 82 ~~~vliiG~g~~~~~l~~~l~~~~g~~~v~~~~ 114 (519)
..+|+|+|.|+...+++..|... |+..+.+.+
T Consensus 118 ~~~VlvvG~GglGs~va~~La~a-Gvg~i~lvD 149 (353)
T 3h5n_A 118 NAKVVILGCGGIGNHVSVILATS-GIGEIILID 149 (353)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHH-TCSEEEEEE
T ss_pred CCeEEEECCCHHHHHHHHHHHhC-CCCeEEEEC
Confidence 46899999999888889999887 887666543
No 339
>3moi_A Probable dehydrogenase; structural genomics, PSI2, MCSG, protein structure initiativ midwest center for structural genomics; 2.50A {Bordetella bronchiseptica}
Probab=54.45 E-value=4.4 Score=40.47 Aligned_cols=142 Identities=8% Similarity=0.084 Sum_probs=70.8
Q ss_pred ccEEEEEeCC-hhHHHHHHHHHhcCCCcEEEEecCCCCCcCCCCCccccCC-CCCCHHHHHHHHHHcCCcEEEECCChhh
Q 010065 82 RVVVLVIGGG-GREHALCYALKRSHSCDAVFCAPGNAGISNSGDATCIPDL-DVLDGDAVISFCRKWSVGLVVVGPEAPL 159 (519)
Q Consensus 82 ~~~vliiG~g-~~~~~l~~~l~~~~g~~~v~~~~~~~~~~~~~~~~~v~~~-d~~d~~~l~~~~~~~~id~Vi~g~E~~~ 159 (519)
+++|.|||.| ......+..+.+..+++++.+.+.++..... ....+ .+ -..|.+++ +...++|+|+...-...
T Consensus 2 ~~rigiiG~G~~~~~~~~~~l~~~~~~~l~av~d~~~~~~~~-~a~~~-g~~~~~~~~el---l~~~~vD~V~i~tp~~~ 76 (387)
T 3moi_A 2 KIRFGICGLGFAGSVLMAPAMRHHPDAQIVAACDPNEDVRER-FGKEY-GIPVFATLAEM---MQHVQMDAVYIASPHQF 76 (387)
T ss_dssp CEEEEEECCSHHHHTTHHHHHHHCTTEEEEEEECSCHHHHHH-HHHHH-TCCEESSHHHH---HHHSCCSEEEECSCGGG
T ss_pred ceEEEEEeCCHHHHHHHHHHHHhCCCeEEEEEEeCCHHHHHH-HHHHc-CCCeECCHHHH---HcCCCCCEEEEcCCcHH
Confidence 5789999999 4333345666666577776654332211100 00011 11 12344444 45668999998644443
Q ss_pred HHHHHHHHHHCCCCeeCCcHHHHHHhcCHHHHHHHHHHcCCCCCC-e-eec-CCHHHHHHHHHH--hCCCEEEEe
Q 010065 160 VSGLANKLVKAGIPTFGPSSEAAALEGSKNFMKNLCDKYGIPTAK-Y-KTF-TDPNAAKQYIQE--EGAPIVVKA 229 (519)
Q Consensus 160 ~~~~a~~le~~gip~~g~~~~~~~~~~dK~~~k~~l~~~Gi~~p~-~-~~v-~~~~~~~~~~~~--~g~P~VvKP 229 (519)
-..++..+-+.|.+++.-.+-+... .+=..+.+++++.|+..-- + ... .....+.+.+++ +|-+..+.-
T Consensus 77 H~~~~~~al~aGk~Vl~EKP~a~~~-~e~~~l~~~a~~~g~~~~v~~~~R~~p~~~~~k~~i~~g~iG~i~~~~~ 150 (387)
T 3moi_A 77 HCEHVVQASEQGLHIIVEKPLTLSR-DEADRMIEAVERAGVHLVVGTSRSHDPVVRTLRAIVQEGSVGRVSMLNC 150 (387)
T ss_dssp HHHHHHHHHHTTCEEEECSCCCSCH-HHHHHHHHHHHHHTCCEEECCCGGGSHHHHHHHHHHHHCTTCCEEEEEE
T ss_pred HHHHHHHHHHCCCceeeeCCccCCH-HHHHHHHHHHHHhCCeEEEEeccccCHHHHHHHHHHhcCCCCCeEEEEE
Confidence 3344555666788876433322211 1122345666777765411 1 111 122345555543 666655553
No 340
>2x6t_A ADP-L-glycero-D-manno-heptose-6-epimerase; isomerase, carbohydrate metabolism, stress response; HET: NAP ADP BMA; 2.36A {Escherichia coli} PDB: 2x86_A*
Probab=54.42 E-value=13 Score=36.00 Aligned_cols=69 Identities=19% Similarity=0.135 Sum_probs=39.3
Q ss_pred ccEEEEEeCC-hhHHHHHHHHHhcCC-CcEEEEecCCCCC--cCCCCCccccCCCCCCHHHHHHHHHHc---CCcEEEE
Q 010065 82 RVVVLVIGGG-GREHALCYALKRSHS-CDAVFCAPGNAGI--SNSGDATCIPDLDVLDGDAVISFCRKW---SVGLVVV 153 (519)
Q Consensus 82 ~~~vliiG~g-~~~~~l~~~l~~~~g-~~~v~~~~~~~~~--~~~~~~~~v~~~d~~d~~~l~~~~~~~---~id~Vi~ 153 (519)
.++|||+|+. .....++..|.+. | ++++.++...... ....... + ..|..|.+.+.++.+.. ++|+||-
T Consensus 46 ~~~vlVtGatG~iG~~l~~~L~~~-g~~~V~~~~r~~~~~~~~~~~~~~-~-~~d~~~~~~~~~~~~~~~~~~~d~Vih 121 (357)
T 2x6t_A 46 GRMIIVTGGAGFIGSNIVKALNDK-GITDILVVDNLKDGTKFVNLVDLN-I-ADYMDKEDFLIQIMAGEEFGDVEAIFH 121 (357)
T ss_dssp --CEEEETTTSHHHHHHHHHHHHT-TCCCEEEEECCSSGGGGGGTTTSC-C-SEEEEHHHHHHHHHTTCCCSSCCEEEE
T ss_pred CCEEEEECCCcHHHHHHHHHHHHC-CCcEEEEEecCCCcchhhcccCce-E-eeecCcHHHHHHHHhhcccCCCCEEEE
Confidence 4789999985 4556788888877 8 7777765432211 1111111 2 33555556555555431 6899987
No 341
>3nzo_A UDP-N-acetylglucosamine 4,6-dehydratase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG, NAD; HET: MSE NAD; 2.10A {Vibrio fischeri} PDB: 3pvz_A*
Probab=54.38 E-value=8.9 Score=38.32 Aligned_cols=70 Identities=16% Similarity=0.151 Sum_probs=43.9
Q ss_pred ccEEEEEeCCh-hHHHHHHHHHhcCC-CcEEEEecCCCCCcC------------CCCCccccCCCCCCHHHHHHHHHHcC
Q 010065 82 RVVVLVIGGGG-REHALCYALKRSHS-CDAVFCAPGNAGISN------------SGDATCIPDLDVLDGDAVISFCRKWS 147 (519)
Q Consensus 82 ~~~vliiG~g~-~~~~l~~~l~~~~g-~~~v~~~~~~~~~~~------------~~~~~~v~~~d~~d~~~l~~~~~~~~ 147 (519)
.++|||+|++| ....++..|.+. | .+++.++.+...... ......+ ..|..|.+.+..+....+
T Consensus 35 ~k~vLVTGatG~IG~~l~~~L~~~-g~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~v~~~-~~Dl~d~~~~~~~~~~~~ 112 (399)
T 3nzo_A 35 QSRFLVLGGAGSIGQAVTKEIFKR-NPQKLHVVDISENNMVELVRDIRSSFGYINGDFQTF-ALDIGSIEYDAFIKADGQ 112 (399)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHTT-CCSEEEEECSCHHHHHHHHHHHHHHTCCCSSEEEEE-CCCTTSHHHHHHHHHCCC
T ss_pred CCEEEEEcCChHHHHHHHHHHHHC-CCCEEEEEECCcchHHHHHHHHHHhcCCCCCcEEEE-EEeCCCHHHHHHHHHhCC
Confidence 57899999764 556788888877 7 566665432110000 0111222 568888777666666678
Q ss_pred CcEEEE
Q 010065 148 VGLVVV 153 (519)
Q Consensus 148 id~Vi~ 153 (519)
+|.|+.
T Consensus 113 ~D~Vih 118 (399)
T 3nzo_A 113 YDYVLN 118 (399)
T ss_dssp CSEEEE
T ss_pred CCEEEE
Confidence 999997
No 342
>3k1t_A Glutamate--cysteine ligase GSHA; putative gamma-glutamylcysteine synthetase; HET: MSE; 1.90A {Methylobacillus flagellatus KT}
Probab=54.32 E-value=16 Score=36.11 Aligned_cols=53 Identities=23% Similarity=0.212 Sum_probs=37.5
Q ss_pred EEEEeCCCCCCCcEEEeCCHHHHHHHHHHHHhhc---cCCCCCCcEEEEeccCCcE
Q 010065 225 IVVKADGLAAGKGVIVAMTLEEAYEAVDSMLLKN---AFGSAGCRVIIEEFLEGEE 277 (519)
Q Consensus 225 ~VvKP~~g~gs~GV~~v~~~~el~~a~~~~~~~~---~~~~~~~~~lvEe~I~G~E 277 (519)
+|||...|.-|.||..|++.+|+...=++.+... .-+..-..+||||=|.-.|
T Consensus 280 V~VKADaGTYGMGImtV~s~~ev~~LNrK~RnKM~~~Keg~~v~~VIIQEGV~T~E 335 (432)
T 3k1t_A 280 VIVKADAGTYGMGIMTVKSADDVRDLNRKQRNKMSVVKEGLKVSEVILQEGVYTFE 335 (432)
T ss_dssp EEEEEECGGGCEEEEEESSGGGGSSCCHHHHHHHHCSSSSSCCCEEEEEECCCCCE
T ss_pred EEEEcCCCCCCceEEEecCHHHHHHHhHHhhhhhhhccCCCccceEEEecCcchhh
Confidence 7999999999999999999999865333333211 1112346799999987644
No 343
>3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A
Probab=54.18 E-value=10 Score=35.49 Aligned_cols=71 Identities=11% Similarity=0.145 Sum_probs=43.7
Q ss_pred CccEEEEEeCC-hhHHHHHHHHHhcCCCcEEEEecCCCCCcC----C-CCCccccCCCCCCHHHHHHHHHH-----cCCc
Q 010065 81 QRVVVLVIGGG-GREHALCYALKRSHSCDAVFCAPGNAGISN----S-GDATCIPDLDVLDGDAVISFCRK-----WSVG 149 (519)
Q Consensus 81 ~~~~vliiG~g-~~~~~l~~~l~~~~g~~~v~~~~~~~~~~~----~-~~~~~v~~~d~~d~~~l~~~~~~-----~~id 149 (519)
+.++++|+|++ +....+++.|.+. |.++++++.+...... . .....+ ..|..|.+.+.+++++ .++|
T Consensus 26 ~gk~vlVTGas~gIG~aia~~la~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~-~~Dv~d~~~v~~~~~~~~~~~g~iD 103 (266)
T 3grp_A 26 TGRKALVTGATGGIGEAIARCFHAQ-GAIVGLHGTREDKLKEIAADLGKDVFVF-SANLSDRKSIKQLAEVAEREMEGID 103 (266)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHCSSEEEE-ECCTTSHHHHHHHHHHHHHHHTSCC
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHhCCceEEE-EeecCCHHHHHHHHHHHHHHcCCCC
Confidence 34788999866 4556788888887 8887776533111000 0 011222 5688887776666553 2799
Q ss_pred EEEE
Q 010065 150 LVVV 153 (519)
Q Consensus 150 ~Vi~ 153 (519)
+++.
T Consensus 104 ~lvn 107 (266)
T 3grp_A 104 ILVN 107 (266)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 9987
No 344
>1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A
Probab=54.17 E-value=9.6 Score=34.88 Aligned_cols=70 Identities=14% Similarity=0.135 Sum_probs=43.3
Q ss_pred ccEEEEEeCC-hhHHHHHHHHHhcCCCcEEEEecCCCCCcC----C---CCCccccCCCCCCHHHHHHHHHH-----cCC
Q 010065 82 RVVVLVIGGG-GREHALCYALKRSHSCDAVFCAPGNAGISN----S---GDATCIPDLDVLDGDAVISFCRK-----WSV 148 (519)
Q Consensus 82 ~~~vliiG~g-~~~~~l~~~l~~~~g~~~v~~~~~~~~~~~----~---~~~~~v~~~d~~d~~~l~~~~~~-----~~i 148 (519)
.++++|+|++ +....++..|.+. |++++.++.+...... . .....+ ..|..|.+.+.+++++ .++
T Consensus 6 ~k~vlVtGasggiG~~~a~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~-~~D~~~~~~~~~~~~~~~~~~~~i 83 (251)
T 1zk4_A 6 GKVAIITGGTLGIGLAIATKFVEE-GAKVMITGRHSDVGEKAAKSVGTPDQIQFF-QHDSSDEDGWTKLFDATEKAFGPV 83 (251)
T ss_dssp TCEEEETTTTSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHCCTTTEEEE-ECCTTCHHHHHHHHHHHHHHHSSC
T ss_pred CcEEEEeCCCChHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHhhccCceEEE-ECCCCCHHHHHHHHHHHHHHhCCC
Confidence 4689999866 3556788888877 8887776543110000 0 111223 5688887777666554 268
Q ss_pred cEEEE
Q 010065 149 GLVVV 153 (519)
Q Consensus 149 d~Vi~ 153 (519)
|.+|.
T Consensus 84 d~li~ 88 (251)
T 1zk4_A 84 STLVN 88 (251)
T ss_dssp CEEEE
T ss_pred CEEEE
Confidence 99987
No 345
>1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann fold, short-chain dehydrogenase, oxidoreductase; 1.22A {Comamonas testosteroni} SCOP: c.2.1.2
Probab=53.98 E-value=10 Score=35.00 Aligned_cols=70 Identities=17% Similarity=0.147 Sum_probs=43.2
Q ss_pred ccEEEEEeCC-hhHHHHHHHHHhcCCCcEEEEecCCCCCcCC-----CCCccccCCCCCCHHHHHHHHHHc-----CCcE
Q 010065 82 RVVVLVIGGG-GREHALCYALKRSHSCDAVFCAPGNAGISNS-----GDATCIPDLDVLDGDAVISFCRKW-----SVGL 150 (519)
Q Consensus 82 ~~~vliiG~g-~~~~~l~~~l~~~~g~~~v~~~~~~~~~~~~-----~~~~~v~~~d~~d~~~l~~~~~~~-----~id~ 150 (519)
.++++|+|++ +....+++.|.+. |.+++.++.+....... .....+ ..|..|.+.+.+++++. ++|+
T Consensus 6 ~k~vlVTGas~giG~~ia~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~-~~D~~~~~~v~~~~~~~~~~~g~id~ 83 (253)
T 1hxh_A 6 GKVALVTGGASGVGLEVVKLLLGE-GAKVAFSDINEAAGQQLAAELGERSMFV-RHDVSSEADWTLVMAAVQRRLGTLNV 83 (253)
T ss_dssp TCEEEETTTTSHHHHHHHHHHHHT-TCEEEEECSCHHHHHHHHHHHCTTEEEE-CCCTTCHHHHHHHHHHHHHHHCSCCE
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHcCCceEEE-EccCCCHHHHHHHHHHHHHHcCCCCE
Confidence 4688999866 4556788888887 88877764321100000 011223 56888877766665542 6899
Q ss_pred EEE
Q 010065 151 VVV 153 (519)
Q Consensus 151 Vi~ 153 (519)
++.
T Consensus 84 lv~ 86 (253)
T 1hxh_A 84 LVN 86 (253)
T ss_dssp EEE
T ss_pred EEE
Confidence 987
No 346
>4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A*
Probab=53.93 E-value=12 Score=34.96 Aligned_cols=70 Identities=20% Similarity=0.303 Sum_probs=43.5
Q ss_pred ccEEEEEeCC-hhHHHHHHHHHhcCCCcEEEEecCCCCC-cC--------CCCCccccCCCCCCHHHHHHHHHHc-----
Q 010065 82 RVVVLVIGGG-GREHALCYALKRSHSCDAVFCAPGNAGI-SN--------SGDATCIPDLDVLDGDAVISFCRKW----- 146 (519)
Q Consensus 82 ~~~vliiG~g-~~~~~l~~~l~~~~g~~~v~~~~~~~~~-~~--------~~~~~~v~~~d~~d~~~l~~~~~~~----- 146 (519)
.++++|+|++ +....++..|.+. |.++++++..+... .. ......+ ..|..|.+.+.+++++.
T Consensus 28 ~k~vlVTGas~gIG~aia~~la~~-G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~D~~d~~~v~~~~~~~~~~~g 105 (269)
T 4dmm_A 28 DRIALVTGASRGIGRAIALELAAA-GAKVAVNYASSAGAADEVVAAIAAAGGEAFAV-KADVSQESEVEALFAAVIERWG 105 (269)
T ss_dssp TCEEEETTCSSHHHHHHHHHHHHT-TCEEEEEESSCHHHHHHHHHHHHHTTCCEEEE-ECCTTSHHHHHHHHHHHHHHHS
T ss_pred CCEEEEECCCCHHHHHHHHHHHHC-CCEEEEEeCCChHHHHHHHHHHHhcCCcEEEE-ECCCCCHHHHHHHHHHHHHHcC
Confidence 4678888865 4566788888887 88887765422110 00 0011222 56888877776666543
Q ss_pred CCcEEEE
Q 010065 147 SVGLVVV 153 (519)
Q Consensus 147 ~id~Vi~ 153 (519)
++|+++.
T Consensus 106 ~id~lv~ 112 (269)
T 4dmm_A 106 RLDVLVN 112 (269)
T ss_dssp CCCEEEE
T ss_pred CCCEEEE
Confidence 7999987
No 347
>2hun_A 336AA long hypothetical DTDP-glucose 4,6-dehydrat; rossmann fold, structural genomics, NPPSFA; HET: NAD; 2.07A {Pyrococcus horikoshii}
Probab=53.76 E-value=34 Score=32.52 Aligned_cols=69 Identities=20% Similarity=0.100 Sum_probs=42.2
Q ss_pred ccEEEEEeCC-hhHHHHHHHHHhcC-CCcEEEEecCCC-C-CcCCC------CCccccCCCCCCHHHHHHHHHHcCCcEE
Q 010065 82 RVVVLVIGGG-GREHALCYALKRSH-SCDAVFCAPGNA-G-ISNSG------DATCIPDLDVLDGDAVISFCRKWSVGLV 151 (519)
Q Consensus 82 ~~~vliiG~g-~~~~~l~~~l~~~~-g~~~v~~~~~~~-~-~~~~~------~~~~v~~~d~~d~~~l~~~~~~~~id~V 151 (519)
.|+|||+|+. .....++..|.+.. +++++.++.... . ..... ....+ ..|..|.+.+.+++ .++|+|
T Consensus 3 ~m~vlVTGatG~iG~~l~~~L~~~g~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~-~~Dl~d~~~~~~~~--~~~d~v 79 (336)
T 2hun_A 3 SMKLLVTGGMGFIGSNFIRYILEKHPDWEVINIDKLGYGSNPANLKDLEDDPRYTFV-KGDVADYELVKELV--RKVDGV 79 (336)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCCGGGGTTTTTCTTEEEE-ECCTTCHHHHHHHH--HTCSEE
T ss_pred CCeEEEECCCchHHHHHHHHHHHhCCCCEEEEEecCcccCchhHHhhhccCCceEEE-EcCCCCHHHHHHHh--hCCCEE
Confidence 3689999965 45566788887762 377776653211 1 11110 11122 46888888777766 478999
Q ss_pred EE
Q 010065 152 VV 153 (519)
Q Consensus 152 i~ 153 (519)
|-
T Consensus 80 ih 81 (336)
T 2hun_A 80 VH 81 (336)
T ss_dssp EE
T ss_pred EE
Confidence 97
No 348
>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae}
Probab=53.64 E-value=70 Score=32.29 Aligned_cols=33 Identities=18% Similarity=0.101 Sum_probs=26.5
Q ss_pred CccEEEEEeCChhHHHHHHHHHhcCCCcEEEEec
Q 010065 81 QRVVVLVIGGGGREHALCYALKRSHSCDAVFCAP 114 (519)
Q Consensus 81 ~~~~vliiG~g~~~~~l~~~l~~~~g~~~v~~~~ 114 (519)
..++|+|+|.|+.....++.|++. |+++...|.
T Consensus 8 ~~k~v~viG~G~sG~s~A~~l~~~-G~~V~~~D~ 40 (451)
T 3lk7_A 8 ENKKVLVLGLARSGEAAARLLAKL-GAIVTVNDG 40 (451)
T ss_dssp TTCEEEEECCTTTHHHHHHHHHHT-TCEEEEEES
T ss_pred CCCEEEEEeeCHHHHHHHHHHHhC-CCEEEEEeC
Confidence 457999999997766778888877 998887764
No 349
>3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti}
Probab=53.58 E-value=16 Score=34.14 Aligned_cols=71 Identities=25% Similarity=0.285 Sum_probs=42.9
Q ss_pred CccEEEEEeCC-hhHHHHHHHHHhcCCCcEEEEecCCCCC-cC--------CCCCccccCCCCCCHHHHHHHHHHc----
Q 010065 81 QRVVVLVIGGG-GREHALCYALKRSHSCDAVFCAPGNAGI-SN--------SGDATCIPDLDVLDGDAVISFCRKW---- 146 (519)
Q Consensus 81 ~~~~vliiG~g-~~~~~l~~~l~~~~g~~~v~~~~~~~~~-~~--------~~~~~~v~~~d~~d~~~l~~~~~~~---- 146 (519)
+.++++|+|++ +....++..|.+. |.++++....+... .. -.....+ ..|..|.+.+.+++++.
T Consensus 26 ~~k~~lVTGas~GIG~aia~~la~~-G~~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~Dl~~~~~v~~~~~~~~~~~ 103 (267)
T 3u5t_A 26 TNKVAIVTGASRGIGAAIAARLASD-GFTVVINYAGKAAAAEEVAGKIEAAGGKALTA-QADVSDPAAVRRLFATAEEAF 103 (267)
T ss_dssp -CCEEEEESCSSHHHHHHHHHHHHH-TCEEEEEESSCSHHHHHHHHHHHHTTCCEEEE-ECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHC-CCEEEEEcCCCHHHHHHHHHHHHhcCCeEEEE-EcCCCCHHHHHHHHHHHHHHc
Confidence 35689999876 4566788888887 88887764322110 00 0011122 46778877766665542
Q ss_pred -CCcEEEE
Q 010065 147 -SVGLVVV 153 (519)
Q Consensus 147 -~id~Vi~ 153 (519)
++|+++.
T Consensus 104 g~iD~lvn 111 (267)
T 3u5t_A 104 GGVDVLVN 111 (267)
T ss_dssp SCEEEEEE
T ss_pred CCCCEEEE
Confidence 6888887
No 350
>1zh8_A Oxidoreductase; TM0312, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI; HET: MSE NAP; 2.50A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.5
Probab=53.50 E-value=11 Score=36.68 Aligned_cols=117 Identities=12% Similarity=0.083 Sum_probs=58.8
Q ss_pred CccEEEEEeCC-hhHHHHHHHHHhc-CCCcEEEEecCCCCCcCCCCCccccC-CCCCCHHHHHHHHHHcCCcEEEECCCh
Q 010065 81 QRVVVLVIGGG-GREHALCYALKRS-HSCDAVFCAPGNAGISNSGDATCIPD-LDVLDGDAVISFCRKWSVGLVVVGPEA 157 (519)
Q Consensus 81 ~~~~vliiG~g-~~~~~l~~~l~~~-~g~~~v~~~~~~~~~~~~~~~~~v~~-~d~~d~~~l~~~~~~~~id~Vi~g~E~ 157 (519)
++++|.|||.| ......+..+++. .+++.+.+.+.++..... ....+.. .-..|.+++ +...++|+|+...-.
T Consensus 17 ~~irvgiIG~G~~~g~~~~~~l~~~~~~~~lvav~d~~~~~~~~-~a~~~~~~~~~~~~~~l---l~~~~vD~V~i~tp~ 92 (340)
T 1zh8_A 17 RKIRLGIVGCGIAARELHLPALKNLSHLFEITAVTSRTRSHAEE-FAKMVGNPAVFDSYEEL---LESGLVDAVDLTLPV 92 (340)
T ss_dssp CCEEEEEECCSHHHHHTHHHHHHTTTTTEEEEEEECSSHHHHHH-HHHHHSSCEEESCHHHH---HHSSCCSEEEECCCG
T ss_pred CceeEEEEecCHHHHHHHHHHHHhCCCceEEEEEEcCCHHHHHH-HHHHhCCCcccCCHHHH---hcCCCCCEEEEeCCc
Confidence 46899999999 4444445666655 466666554332211100 0011100 012344444 445679999986444
Q ss_pred hhHHHHHHHHHHCCCCeeCCcHHHHHHhcCHHHHHHHHHHcCCCC
Q 010065 158 PLVSGLANKLVKAGIPTFGPSSEAAALEGSKNFMKNLCDKYGIPT 202 (519)
Q Consensus 158 ~~~~~~a~~le~~gip~~g~~~~~~~~~~dK~~~k~~l~~~Gi~~ 202 (519)
..-..++..+-+.|.+++.-.|-+... .+=..+.+++++.|+..
T Consensus 93 ~~H~~~~~~al~aGkhVl~EKPla~~~-~ea~~l~~~a~~~g~~~ 136 (340)
T 1zh8_A 93 ELNLPFIEKALRKGVHVICEKPISTDV-ETGKKVVELSEKSEKTV 136 (340)
T ss_dssp GGHHHHHHHHHHTTCEEEEESSSSSSH-HHHHHHHHHHHHCSSCE
T ss_pred hHHHHHHHHHHHCCCcEEEeCCCCCCH-HHHHHHHHHHHHcCCeE
Confidence 443345555556788776333222111 11123445566777653
No 351
>3ehe_A UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC, ST genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; HET: NAD; 1.87A {Archaeoglobus fulgidus} SCOP: c.2.1.0
Probab=53.49 E-value=11 Score=35.78 Aligned_cols=66 Identities=18% Similarity=0.227 Sum_probs=36.7
Q ss_pred ccEEEEEeCCh-hHHHHHHHHHhcCCCcEEEEecCCCCC-cCC-CCCccccCCCCCCHHHHHHHHHHcCCcEEEE
Q 010065 82 RVVVLVIGGGG-REHALCYALKRSHSCDAVFCAPGNAGI-SNS-GDATCIPDLDVLDGDAVISFCRKWSVGLVVV 153 (519)
Q Consensus 82 ~~~vliiG~g~-~~~~l~~~l~~~~g~~~v~~~~~~~~~-~~~-~~~~~v~~~d~~d~~~l~~~~~~~~id~Vi~ 153 (519)
+++|||+|++| ....++..|.+. | .++.+...+... ... .....+ ..|..+ +.+.++++ ++|.|+-
T Consensus 1 M~~vlVTGatG~iG~~l~~~L~~~-g-~~v~~~~~~~~~~~~~~~~~~~~-~~Dl~~-~~~~~~~~--~~d~vih 69 (313)
T 3ehe_A 1 MSLIVVTGGAGFIGSHVVDKLSES-N-EIVVIDNLSSGNEEFVNEAARLV-KADLAA-DDIKDYLK--GAEEVWH 69 (313)
T ss_dssp --CEEEETTTSHHHHHHHHHHTTT-S-CEEEECCCSSCCGGGSCTTEEEE-CCCTTT-SCCHHHHT--TCSEEEE
T ss_pred CCEEEEECCCchHHHHHHHHHHhC-C-CEEEEEcCCCCChhhcCCCcEEE-ECcCCh-HHHHHHhc--CCCEEEE
Confidence 36899999754 556788888876 7 555554322211 111 111222 456665 55555554 7898886
No 352
>2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A*
Probab=53.43 E-value=11 Score=34.24 Aligned_cols=70 Identities=14% Similarity=0.247 Sum_probs=43.3
Q ss_pred ccEEEEEeCC-hhHHHHHHHHHhcCCCcEEEEecCCCCCcC---------CCCCccccCCCCCCHHHHHHHHHHc-----
Q 010065 82 RVVVLVIGGG-GREHALCYALKRSHSCDAVFCAPGNAGISN---------SGDATCIPDLDVLDGDAVISFCRKW----- 146 (519)
Q Consensus 82 ~~~vliiG~g-~~~~~l~~~l~~~~g~~~v~~~~~~~~~~~---------~~~~~~v~~~d~~d~~~l~~~~~~~----- 146 (519)
.++++|+|++ +....+++.|.+. |++++.++.+...... ......+ ..|..|.+.+.+++++.
T Consensus 7 ~~~vlVtGasggiG~~la~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~-~~D~~~~~~~~~~~~~~~~~~~ 84 (248)
T 2pnf_A 7 GKVSLVTGSTRGIGRAIAEKLASA-GSTVIITGTSGERAKAVAEEIANKYGVKAHGV-EMNLLSEESINKAFEEIYNLVD 84 (248)
T ss_dssp TCEEEETTCSSHHHHHHHHHHHHT-TCEEEEEESSHHHHHHHHHHHHHHHCCCEEEE-ECCTTCHHHHHHHHHHHHHHSS
T ss_pred CCEEEEECCCchHHHHHHHHHHHC-CCEEEEEeCChHHHHHHHHHHHhhcCCceEEE-EccCCCHHHHHHHHHHHHHhcC
Confidence 4678999866 4556788888877 8888776543110000 0011222 46778877776666542
Q ss_pred CCcEEEE
Q 010065 147 SVGLVVV 153 (519)
Q Consensus 147 ~id~Vi~ 153 (519)
++|+||.
T Consensus 85 ~~d~vi~ 91 (248)
T 2pnf_A 85 GIDILVN 91 (248)
T ss_dssp CCSEEEE
T ss_pred CCCEEEE
Confidence 7999987
No 353
>3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei}
Probab=53.22 E-value=9.2 Score=35.86 Aligned_cols=71 Identities=23% Similarity=0.275 Sum_probs=43.9
Q ss_pred CccEEEEEeCC-hhHHHHHHHHHhcCCCcEEEEecCCCCCcC--------CCCCccccCCCCCCHHHHHHHHHHc-----
Q 010065 81 QRVVVLVIGGG-GREHALCYALKRSHSCDAVFCAPGNAGISN--------SGDATCIPDLDVLDGDAVISFCRKW----- 146 (519)
Q Consensus 81 ~~~~vliiG~g-~~~~~l~~~l~~~~g~~~v~~~~~~~~~~~--------~~~~~~v~~~d~~d~~~l~~~~~~~----- 146 (519)
+.++++|+|++ +....++..|.+. |.+++.++.+...... -.....+ ..|..|.+.+.+++++.
T Consensus 27 ~~k~~lVTGas~GIG~aia~~la~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~-~~Dv~d~~~v~~~~~~~~~~~g 104 (270)
T 3ftp_A 27 DKQVAIVTGASRGIGRAIALELARR-GAMVIGTATTEAGAEGIGAAFKQAGLEGRGA-VLNVNDATAVDALVESTLKEFG 104 (270)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHT-TCEEEEEESSHHHHHHHHHHHHHHTCCCEEE-ECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHHHhcCCcEEEE-EEeCCCHHHHHHHHHHHHHHcC
Confidence 35678888865 4556788888887 8988776543111000 0011222 46888877776666542
Q ss_pred CCcEEEE
Q 010065 147 SVGLVVV 153 (519)
Q Consensus 147 ~id~Vi~ 153 (519)
++|+++.
T Consensus 105 ~iD~lvn 111 (270)
T 3ftp_A 105 ALNVLVN 111 (270)
T ss_dssp CCCEEEE
T ss_pred CCCEEEE
Confidence 7999987
No 354
>2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis}
Probab=53.03 E-value=15 Score=33.54 Aligned_cols=70 Identities=24% Similarity=0.385 Sum_probs=43.5
Q ss_pred ccEEEEEeCC-hhHHHHHHHHHhcCCCcEEEEecCCCC-CcC--------CCCCccccCCCCCCHHHHHHHHHHc-----
Q 010065 82 RVVVLVIGGG-GREHALCYALKRSHSCDAVFCAPGNAG-ISN--------SGDATCIPDLDVLDGDAVISFCRKW----- 146 (519)
Q Consensus 82 ~~~vliiG~g-~~~~~l~~~l~~~~g~~~v~~~~~~~~-~~~--------~~~~~~v~~~d~~d~~~l~~~~~~~----- 146 (519)
.++++|+|++ +....+++.|.+. |.+++.++..+.. ... ......+ ..|..|.+.+.+++++.
T Consensus 4 ~k~vlVTGas~giG~~ia~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~-~~D~~~~~~~~~~~~~~~~~~g 81 (246)
T 2uvd_A 4 GKVALVTGASRGIGRAIAIDLAKQ-GANVVVNYAGNEQKANEVVDEIKKLGSDAIAV-RADVANAEDVTNMVKQTVDVFG 81 (246)
T ss_dssp TCEEEETTCSSHHHHHHHHHHHHT-TCEEEEEESSCHHHHHHHHHHHHHTTCCEEEE-ECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCEEEEECCCcHHHHHHHHHHHHC-CCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEE-EcCCCCHHHHHHHHHHHHHHcC
Confidence 4678999866 4556788888887 8888776542211 000 0011222 56888877776666542
Q ss_pred CCcEEEE
Q 010065 147 SVGLVVV 153 (519)
Q Consensus 147 ~id~Vi~ 153 (519)
++|+++.
T Consensus 82 ~id~lv~ 88 (246)
T 2uvd_A 82 QVDILVN 88 (246)
T ss_dssp CCCEEEE
T ss_pred CCCEEEE
Confidence 7999987
No 355
>3otg_A CALG1; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD; 2.08A {Micromonospora echinospora} PDB: 3oth_A*
Probab=53.00 E-value=20 Score=35.25 Aligned_cols=37 Identities=27% Similarity=0.282 Sum_probs=23.6
Q ss_pred HHHHHHHHHcCCcEEEECCChhhHHHHHHHHHHCCCCeeC
Q 010065 137 DAVISFCRKWSVGLVVVGPEAPLVSGLANKLVKAGIPTFG 176 (519)
Q Consensus 137 ~~l~~~~~~~~id~Vi~g~E~~~~~~~a~~le~~gip~~g 176 (519)
..+.+++++.++|+|+..+-.. .+ ....+.+|+|++.
T Consensus 120 ~~l~~~l~~~~pDvVv~~~~~~--~~-~~aa~~~giP~v~ 156 (412)
T 3otg_A 120 DELQPVIERLRPDLVVQEISNY--GA-GLAALKAGIPTIC 156 (412)
T ss_dssp HHHHHHHHHHCCSEEEEETTCH--HH-HHHHHHHTCCEEE
T ss_pred HHHHHHHHhcCCCEEEECchhh--HH-HHHHHHcCCCEEE
Confidence 5667777888999998742221 11 2234578999863
No 356
>3rui_A Ubiquitin-like modifier-activating enzyme ATG7; autophagosome formation, non-canonical E1, ATP BI UBL, ATG8, ATG12, ATG10, ATG3, UBL activation, thiolation; 1.91A {Saccharomyces cerevisiae} PDB: 3t7e_A 3vh3_A 3vh4_A*
Probab=52.92 E-value=72 Score=31.02 Aligned_cols=31 Identities=19% Similarity=0.186 Sum_probs=26.2
Q ss_pred ccEEEEEeCChhHHHHHHHHHhcCCCcEEEEe
Q 010065 82 RVVVLVIGGGGREHALCYALKRSHSCDAVFCA 113 (519)
Q Consensus 82 ~~~vliiG~g~~~~~l~~~l~~~~g~~~v~~~ 113 (519)
..+|+|+|.|+...+++..|... |+..+.+.
T Consensus 34 ~~~VlIvGaGGlGs~va~~La~a-GVg~Itlv 64 (340)
T 3rui_A 34 NTKVLLLGAGTLGCYVSRALIAW-GVRKITFV 64 (340)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHT-TCCEEEEE
T ss_pred CCEEEEECCCHHHHHHHHHHHHc-CCCEEEEe
Confidence 47899999999888889999887 88877654
No 357
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=52.90 E-value=16 Score=29.61 Aligned_cols=87 Identities=13% Similarity=0.040 Sum_probs=45.7
Q ss_pred ccEEEEEeCChhHHHHHHHHHhcCCCcEEEEecCCCCCcCCC---CCccccCCCCCCHHHHHHHHHHcCCcEEEEC-CCh
Q 010065 82 RVVVLVIGGGGREHALCYALKRSHSCDAVFCAPGNAGISNSG---DATCIPDLDVLDGDAVISFCRKWSVGLVVVG-PEA 157 (519)
Q Consensus 82 ~~~vliiG~g~~~~~l~~~l~~~~g~~~v~~~~~~~~~~~~~---~~~~v~~~d~~d~~~l~~~~~~~~id~Vi~g-~E~ 157 (519)
.++|+|+|.|.....++..|.+. |+++++++.+........ ....+ ..|..+.+.+.+. .-.+.|.|+.. +.+
T Consensus 4 ~m~i~IiG~G~iG~~~a~~L~~~-g~~v~~~d~~~~~~~~~~~~~~~~~~-~~d~~~~~~l~~~-~~~~~d~vi~~~~~~ 80 (140)
T 1lss_A 4 GMYIIIAGIGRVGYTLAKSLSEK-GHDIVLIDIDKDICKKASAEIDALVI-NGDCTKIKTLEDA-GIEDADMYIAVTGKE 80 (140)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHCSSEEE-ESCTTSHHHHHHT-TTTTCSEEEECCSCH
T ss_pred CCEEEEECCCHHHHHHHHHHHhC-CCeEEEEECCHHHHHHHHHhcCcEEE-EcCCCCHHHHHHc-CcccCCEEEEeeCCc
Confidence 37899999997777788888876 888877764311110000 11111 2345555544322 12357888874 333
Q ss_pred hhHHHHHHHHHHCC
Q 010065 158 PLVSGLANKLVKAG 171 (519)
Q Consensus 158 ~~~~~~a~~le~~g 171 (519)
.....+...+..++
T Consensus 81 ~~~~~~~~~~~~~~ 94 (140)
T 1lss_A 81 EVNLMSSLLAKSYG 94 (140)
T ss_dssp HHHHHHHHHHHHTT
T ss_pred hHHHHHHHHHHHcC
Confidence 22222333444444
No 358
>2vob_A Trypanothione synthetase; ligase; 2.3A {Leishmania major} PDB: 2vps_A 2vpm_A
Probab=52.90 E-value=14 Score=39.42 Aligned_cols=114 Identities=13% Similarity=0.089 Sum_probs=49.5
Q ss_pred HHHHHHHC--CCCeeCCcHHHHHHhcCHHHHHHHHHHcC-CC-CCCeeecCCHHHHHHHHHHhCCCEEEEeCCCCCCCcE
Q 010065 163 LANKLVKA--GIPTFGPSSEAAALEGSKNFMKNLCDKYG-IP-TAKYKTFTDPNAAKQYIQEEGAPIVVKADGLAAGKGV 238 (519)
Q Consensus 163 ~a~~le~~--gip~~g~~~~~~~~~~dK~~~k~~l~~~G-i~-~p~~~~v~~~~~~~~~~~~~g~P~VvKP~~g~gs~GV 238 (519)
+.+.+..- ++.++. +....+..||..+.-+-+.+. -| .+++. +.....+ ..- .+|+||..|..|.||
T Consensus 488 ~~~~l~~~~~~v~~ie--P~wk~LlsNKaiLalLW~l~p~hp~LLpt~-f~~~~~~----~~~--~yV~KPi~gReG~nV 558 (652)
T 2vob_A 488 LCDLLLGDDWEILYFE--PMWKVIPSNKAILPMIYHNHPEHPAILKAE-YELTDEL----RKH--GYAKKPIVGRVGSNV 558 (652)
T ss_dssp HHHHHSSSCTTSEEES--CGGGGTTTSTTHHHHHHHHCTTCTTBCCEE-SSCCHHH----HHH--CEEEEECC-------
T ss_pred HHHHHhcCCCceEEeC--hhHHHhhcCHHHHHHHHhcccCCCCCCchh-hcCCCcc----ccC--CeEeccCCCCCCCCE
Confidence 44556666 677773 334457899998877666421 11 12332 2221221 111 599999999999999
Q ss_pred EEeCCHHHHHHHHHHHHhhccCCCCCCcEEEEeccC-----CcEEEEEEEEeCCeeEEe
Q 010065 239 IVAMTLEEAYEAVDSMLLKNAFGSAGCRVIIEEFLE-----GEEASFFALVDGENAIPL 292 (519)
Q Consensus 239 ~~v~~~~el~~a~~~~~~~~~~~~~~~~~lvEe~I~-----G~E~sv~~l~dg~~~~~~ 292 (519)
.+.+...+..+.... .| .+..+|+|+|++ |.-+.+.++.-|+....+
T Consensus 559 ~I~~~~~~~~~~~~g-----~y--~~~~~IyQe~~~lp~f~~~~~~iG~~lvg~~~aGi 610 (652)
T 2vob_A 559 IITSGDGVVHAESGG-----KY--GKRNMIYQQLFELKKQDDYYAIIGGWMIGDAFSGT 610 (652)
T ss_dssp ---------------------------CEEEEECCC--CBTTBCCEEEEEEETTEEEEE
T ss_pred EEEcCCchhhhhccc-----cc--CCCCeEEEecccCCccCCcceEEEEEEECCEEEEE
Confidence 998653332111111 11 247899999997 334455555433333333
No 359
>2p2s_A Putative oxidoreductase; YP_050235.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.25A {Pectobacterium atrosepticum SCRI1043}
Probab=52.88 E-value=12 Score=36.36 Aligned_cols=141 Identities=15% Similarity=0.115 Sum_probs=68.2
Q ss_pred ccEEEEEeCChhH-HHHHHHHHhcCCCcEEEEecCCCCCcCCCCCcccc-CCCCCCHHHHHHHHHHcCCcEEEECCChhh
Q 010065 82 RVVVLVIGGGGRE-HALCYALKRSHSCDAVFCAPGNAGISNSGDATCIP-DLDVLDGDAVISFCRKWSVGLVVVGPEAPL 159 (519)
Q Consensus 82 ~~~vliiG~g~~~-~~l~~~l~~~~g~~~v~~~~~~~~~~~~~~~~~v~-~~d~~d~~~l~~~~~~~~id~Vi~g~E~~~ 159 (519)
+++|.|||.|... ...+..++. .+++++.+.+.++..... ....+. ..-..|.+++ +...++|+|+...-+..
T Consensus 4 ~~rvgiiG~G~~~~~~~~~~l~~-~~~~lvav~d~~~~~~~~-~a~~~~~~~~~~~~~~l---l~~~~~D~V~i~tp~~~ 78 (336)
T 2p2s_A 4 KIRFAAIGLAHNHIYDMCQQLID-AGAELAGVFESDSDNRAK-FTSLFPSVPFAASAEQL---ITDASIDLIACAVIPCD 78 (336)
T ss_dssp CCEEEEECCSSTHHHHHHHHHHH-TTCEEEEEECSCTTSCHH-HHHHSTTCCBCSCHHHH---HTCTTCCEEEECSCGGG
T ss_pred ccEEEEECCChHHHHHhhhhhcC-CCcEEEEEeCCCHHHHHH-HHHhcCCCcccCCHHHH---hhCCCCCEEEEeCChhh
Confidence 5799999988533 234555544 378876554333321110 001110 0112345554 44557999998644444
Q ss_pred HHHHHHHHHHCCCCeeCCcHHHHHHhcCHHHHHHHHHHcCCCCCCe--eecCC--HHHHHHHHH--HhCCCEEEE
Q 010065 160 VSGLANKLVKAGIPTFGPSSEAAALEGSKNFMKNLCDKYGIPTAKY--KTFTD--PNAAKQYIQ--EEGAPIVVK 228 (519)
Q Consensus 160 ~~~~a~~le~~gip~~g~~~~~~~~~~dK~~~k~~l~~~Gi~~p~~--~~v~~--~~~~~~~~~--~~g~P~VvK 228 (519)
-..++..+-+.|.+++.-.|-+... .+=..+.+.+++.|+..--. ..... ...+.+.++ .+|-+..+.
T Consensus 79 h~~~~~~al~aGkhVl~EKP~a~~~-~e~~~l~~~a~~~g~~~~v~~~~R~~p~~~~~~~~~i~~g~iG~i~~v~ 152 (336)
T 2p2s_A 79 RAELALRTLDAGKDFFTAKPPLTTL-EQLDAVQRRVAETGRKFAVYFNERINVDSALFAGELVQRGEIGRVIQTM 152 (336)
T ss_dssp HHHHHHHHHHTTCEEEECSSCCSCH-HHHHHHHHHHHHHCCCEEECCTTTTTCHHHHHHHHHHHTTTTSSEEEEE
T ss_pred HHHHHHHHHHCCCcEEEeCCCCCCH-HHHHHHHHHHHHcCCEEEEeeccccCcHHHHHHHHHHhCCCCCceEEEE
Confidence 3344444556788766332222111 11223455667777654211 11121 344555554 456555544
No 360
>4fk1_A Putative thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE FAD; 2.40A {Bacillus anthracis} PDB: 4fk1_C*
Probab=52.81 E-value=37 Score=31.93 Aligned_cols=35 Identities=17% Similarity=0.196 Sum_probs=26.0
Q ss_pred CccEEEEEeCChhHHHHHHHHHhcCCCcEEEEecCC
Q 010065 81 QRVVVLVIGGGGREHALCYALKRSHSCDAVFCAPGN 116 (519)
Q Consensus 81 ~~~~vliiG~g~~~~~l~~~l~~~~g~~~v~~~~~~ 116 (519)
+.+.|+|||+|......+..+++. |.++++++.+.
T Consensus 5 ~~yDVvIIGaGpAGlsAA~~lar~-g~~v~lie~~~ 39 (304)
T 4fk1_A 5 KYIDCAVIGAGPAGLNASLVLGRA-RKQIALFDNNT 39 (304)
T ss_dssp -CEEEEEECCSHHHHHHHHHHHHT-TCCEEEEECSC
T ss_pred CCcCEEEECCCHHHHHHHHHHHHC-CCCEEEEeCCC
Confidence 457899999996555556777766 89998887553
No 361
>4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum}
Probab=52.72 E-value=10 Score=35.62 Aligned_cols=70 Identities=19% Similarity=0.292 Sum_probs=43.0
Q ss_pred ccEEEEEeCC-hhHHHHHHHHHhcCCCcEEEEecCCCCCcC--------CCCCccccCCCCCCHHHHHHHHHHc-----C
Q 010065 82 RVVVLVIGGG-GREHALCYALKRSHSCDAVFCAPGNAGISN--------SGDATCIPDLDVLDGDAVISFCRKW-----S 147 (519)
Q Consensus 82 ~~~vliiG~g-~~~~~l~~~l~~~~g~~~v~~~~~~~~~~~--------~~~~~~v~~~d~~d~~~l~~~~~~~-----~ 147 (519)
.++++|.|++ +....+++.|.+. |.++++++.+...... -.....+ ..|..|.+.+.+++++. +
T Consensus 26 gk~~lVTGas~gIG~aia~~la~~-G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~-~~Dv~d~~~v~~~~~~~~~~~g~ 103 (271)
T 4ibo_A 26 GRTALVTGSSRGLGRAMAEGLAVA-GARILINGTDPSRVAQTVQEFRNVGHDAEAV-AFDVTSESEIIEAFARLDEQGID 103 (271)
T ss_dssp TCEEEETTCSSHHHHHHHHHHHHT-TCEEEECCSCHHHHHHHHHHHHHTTCCEEEC-CCCTTCHHHHHHHHHHHHHHTCC
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHHHhcCCceEEE-EcCCCCHHHHHHHHHHHHHHCCC
Confidence 4688888866 4556788898887 8887765432110000 0011223 56888877776666542 6
Q ss_pred CcEEEE
Q 010065 148 VGLVVV 153 (519)
Q Consensus 148 id~Vi~ 153 (519)
+|+++.
T Consensus 104 iD~lv~ 109 (271)
T 4ibo_A 104 VDILVN 109 (271)
T ss_dssp CCEEEE
T ss_pred CCEEEE
Confidence 898887
No 362
>2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A
Probab=52.72 E-value=8.3 Score=35.07 Aligned_cols=68 Identities=9% Similarity=0.056 Sum_probs=40.3
Q ss_pred ccEEEEEeCC-hhHHHHHHHHHhcCCC--cEEEEecCCCCCcCC--CCCccccCCCCCCHHHHHHHHHHcCCcEEEE
Q 010065 82 RVVVLVIGGG-GREHALCYALKRSHSC--DAVFCAPGNAGISNS--GDATCIPDLDVLDGDAVISFCRKWSVGLVVV 153 (519)
Q Consensus 82 ~~~vliiG~g-~~~~~l~~~l~~~~g~--~~v~~~~~~~~~~~~--~~~~~v~~~d~~d~~~l~~~~~~~~id~Vi~ 153 (519)
.++|+|+|++ +....++..|.+. |. +++.++.+....... .....+ ..|..|.+.+.+.++ ++|.||.
T Consensus 18 ~~~vlVtGasg~iG~~l~~~L~~~-G~~~~V~~~~r~~~~~~~~~~~~~~~~-~~D~~d~~~~~~~~~--~~d~vi~ 90 (242)
T 2bka_A 18 NKSVFILGASGETGRVLLKEILEQ-GLFSKVTLIGRRKLTFDEEAYKNVNQE-VVDFEKLDDYASAFQ--GHDVGFC 90 (242)
T ss_dssp CCEEEEECTTSHHHHHHHHHHHHH-TCCSEEEEEESSCCCCCSGGGGGCEEE-ECCGGGGGGGGGGGS--SCSEEEE
T ss_pred CCeEEEECCCcHHHHHHHHHHHcC-CCCCEEEEEEcCCCCccccccCCceEE-ecCcCCHHHHHHHhc--CCCEEEE
Confidence 4689999964 4566788888877 88 777765432211111 011122 356666555544443 6899987
No 363
>3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti}
Probab=52.66 E-value=12 Score=35.16 Aligned_cols=71 Identities=17% Similarity=0.225 Sum_probs=43.5
Q ss_pred CccEEEEEeCC-hhHHHHHHHHHhcCCCcEEEEecCCCCCc----C----CCCCccccCCCCCCHHHHHHHHHHc-----
Q 010065 81 QRVVVLVIGGG-GREHALCYALKRSHSCDAVFCAPGNAGIS----N----SGDATCIPDLDVLDGDAVISFCRKW----- 146 (519)
Q Consensus 81 ~~~~vliiG~g-~~~~~l~~~l~~~~g~~~v~~~~~~~~~~----~----~~~~~~v~~~d~~d~~~l~~~~~~~----- 146 (519)
+.++++|+|++ +....+++.|.+. |.++++++.+..... . ......+ ..|..|.+.+.+++++.
T Consensus 7 ~gk~vlVTGas~GIG~aia~~la~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~-~~Dv~~~~~v~~~~~~~~~~~g 84 (280)
T 3tox_A 7 EGKIAIVTGASSGIGRAAALLFARE-GAKVVVTARNGNALAELTDEIAGGGGEAAAL-AGDVGDEALHEALVELAVRRFG 84 (280)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHT-TCEEEECCSCHHHHHHHHHHHTTTTCCEEEC-CCCTTCHHHHHHHHHHHHHHHS
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHC-CCEEEEEECCHHHHHHHHHHHHhcCCcEEEE-ECCCCCHHHHHHHHHHHHHHcC
Confidence 34678999876 4566788898887 888776643311000 0 0011222 56888877766665542
Q ss_pred CCcEEEE
Q 010065 147 SVGLVVV 153 (519)
Q Consensus 147 ~id~Vi~ 153 (519)
++|+++.
T Consensus 85 ~iD~lvn 91 (280)
T 3tox_A 85 GLDTAFN 91 (280)
T ss_dssp CCCEEEE
T ss_pred CCCEEEE
Confidence 7999887
No 364
>3ijp_A DHPR, dihydrodipicolinate reductase; ssgcid, SBRI, decode biostructures, niaid, amino-acid biosynthesis, cytoplasm; HET: NAP; 2.30A {Bartonella henselae}
Probab=52.66 E-value=57 Score=30.96 Aligned_cols=94 Identities=12% Similarity=0.033 Sum_probs=48.6
Q ss_pred CCCCCccEEEEEe-CChhHHHHHHHHHhcCCCcEEEEecCCC----CCc--CCCCCccccCCCCCCHHHHHHHHHHcCCc
Q 010065 77 TNAGQRVVVLVIG-GGGREHALCYALKRSHSCDAVFCAPGNA----GIS--NSGDATCIPDLDVLDGDAVISFCRKWSVG 149 (519)
Q Consensus 77 ~~~~~~~~vliiG-~g~~~~~l~~~l~~~~g~~~v~~~~~~~----~~~--~~~~~~~v~~~d~~d~~~l~~~~~~~~id 149 (519)
..+..++||.|+| .|.....++..+.+..+++.+.+...+. +.. ...........-..|+++++. ++|
T Consensus 16 ~~m~~~irV~V~Ga~GrMGr~i~~~v~~~~~~eLvg~vd~~~~~~~G~d~gel~G~~~~gv~v~~dl~~ll~-----~aD 90 (288)
T 3ijp_A 16 TQGPGSMRLTVVGANGRMGRELITAIQRRKDVELCAVLVRKGSSFVDKDASILIGSDFLGVRITDDPESAFS-----NTE 90 (288)
T ss_dssp -----CEEEEESSTTSHHHHHHHHHHHTCSSEEEEEEBCCTTCTTTTSBGGGGTTCSCCSCBCBSCHHHHTT-----SCS
T ss_pred hhccCCeEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecCCccccccchHHhhccCcCCceeeCCHHHHhc-----CCC
Confidence 3444678999999 6645566778777776777666532221 110 000000000011245666542 689
Q ss_pred EEEECCChhhHHHHHHHHHHCCCCee
Q 010065 150 LVVVGPEAPLVSGLANKLVKAGIPTF 175 (519)
Q Consensus 150 ~Vi~g~E~~~~~~~a~~le~~gip~~ 175 (519)
+|+-..-..........+.+.|+|++
T Consensus 91 VvIDFT~p~a~~~~~~~~l~~Gv~vV 116 (288)
T 3ijp_A 91 GILDFSQPQASVLYANYAAQKSLIHI 116 (288)
T ss_dssp EEEECSCHHHHHHHHHHHHHHTCEEE
T ss_pred EEEEcCCHHHHHHHHHHHHHcCCCEE
Confidence 88864332222345566778899875
No 365
>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0
Probab=52.56 E-value=59 Score=30.16 Aligned_cols=33 Identities=21% Similarity=0.391 Sum_probs=25.5
Q ss_pred CccEEEEEeCC-hhHHHHHHHHHhcCCCcEEEEec
Q 010065 81 QRVVVLVIGGG-GREHALCYALKRSHSCDAVFCAP 114 (519)
Q Consensus 81 ~~~~vliiG~g-~~~~~l~~~l~~~~g~~~v~~~~ 114 (519)
+.++++|+|++ +....+++.|.+. |.+++.++.
T Consensus 14 ~gk~~lVTGas~gIG~a~a~~la~~-G~~V~~~~r 47 (280)
T 3pgx_A 14 QGRVAFITGAARGQGRSHAVRLAAE-GADIIACDI 47 (280)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHT-TCEEEEEEC
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHC-CCEEEEEec
Confidence 45789999976 4566788999887 998887754
No 366
>3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis}
Probab=52.41 E-value=11 Score=35.13 Aligned_cols=71 Identities=13% Similarity=0.192 Sum_probs=44.7
Q ss_pred CccEEEEEeCC-hhHHHHHHHHHhcCCCcEEEEecCCCCCcC----------CCCCccccCCCCCCHHHHHHHHHHc-CC
Q 010065 81 QRVVVLVIGGG-GREHALCYALKRSHSCDAVFCAPGNAGISN----------SGDATCIPDLDVLDGDAVISFCRKW-SV 148 (519)
Q Consensus 81 ~~~~vliiG~g-~~~~~l~~~l~~~~g~~~v~~~~~~~~~~~----------~~~~~~v~~~d~~d~~~l~~~~~~~-~i 148 (519)
+.++++|+|++ +....+++.|.+. |.++++++.+...... ......+ ..|..+.+.+.++.++. ++
T Consensus 9 ~~k~~lVTGas~gIG~aia~~l~~~-G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~-~~D~~~~~~~~~~~~~~g~i 86 (267)
T 3t4x_A 9 KGKTALVTGSTAGIGKAIATSLVAE-GANVLINGRREENVNETIKEIRAQYPDAILQPV-VADLGTEQGCQDVIEKYPKV 86 (267)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHT-TCEEEEEESSHHHHHHHHHHHHHHCTTCEEEEE-ECCTTSHHHHHHHHHHCCCC
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHHHhhCCCceEEEE-ecCCCCHHHHHHHHHhcCCC
Confidence 35789999865 4566788888887 8888777543111000 0001112 46777877777777765 68
Q ss_pred cEEEE
Q 010065 149 GLVVV 153 (519)
Q Consensus 149 d~Vi~ 153 (519)
|.++.
T Consensus 87 d~lv~ 91 (267)
T 3t4x_A 87 DILIN 91 (267)
T ss_dssp SEEEE
T ss_pred CEEEE
Confidence 88887
No 367
>3out_A Glutamate racemase; structural genomics, center for structural genomics of infec diseases, csgid, MURI, cell envelope; HET: MSE DGL; 1.65A {Francisella tularensis subsp}
Probab=52.39 E-value=40 Score=31.60 Aligned_cols=85 Identities=12% Similarity=0.031 Sum_probs=48.1
Q ss_pred ccEEEEEeCChhHHHHHHHHHhcC-CCcEEEEecCCCCCcCCCCCccccCCCCCCHH-------HHHHHHHHcCCcEEEE
Q 010065 82 RVVVLVIGGGGREHALCYALKRSH-SCDAVFCAPGNAGISNSGDATCIPDLDVLDGD-------AVISFCRKWSVGLVVV 153 (519)
Q Consensus 82 ~~~vliiG~g~~~~~l~~~l~~~~-g~~~v~~~~~~~~~~~~~~~~~v~~~d~~d~~-------~l~~~~~~~~id~Vi~ 153 (519)
...|+|+.+|--...+++.+++.. +.+.+++.+... . +.-..+.+ +..+.+.+.++|+|+.
T Consensus 7 ~~pIgvfDSGvGGLtv~~~i~~~lp~~~~iy~~D~a~----------~-PYG~~~~~~i~~~~~~~~~~L~~~g~~~iVI 75 (268)
T 3out_A 7 NRPIGVFDSGIGGLTIVKNLMSILPNEDIIYFGDIAR----------I-PYGTKSRATIQKFAAQTAKFLIDQEVKAIII 75 (268)
T ss_dssp TSCEEEEESSSTTHHHHHHHHHHCTTCCEEEEECTTT----------C-CCTTSCHHHHHHHHHHHHHHHHHTTCSEEEE
T ss_pred CCcEEEEECCCChHHHHHHHHHHCCCCcEEEecCCCC----------C-CCCCCCHHHHHHHHHHHHHHHHHCCCCEEEE
Confidence 457999988743344566666554 556666643311 1 11112222 2334445678999999
Q ss_pred CCChhhHHHHHHHHHHC-CCCeeCC
Q 010065 154 GPEAPLVSGLANKLVKA-GIPTFGP 177 (519)
Q Consensus 154 g~E~~~~~~~a~~le~~-gip~~g~ 177 (519)
.+.+.....+...-+.. ++|++|.
T Consensus 76 ACNTa~~~al~~lr~~~~~iPvigi 100 (268)
T 3out_A 76 ACNTISAIAKDIVQEIAKAIPVIDV 100 (268)
T ss_dssp CCHHHHHHHHHHHHHHHTTSCEEEH
T ss_pred eCCChHHHHHHHHHHhcCCCCEEec
Confidence 77666532333334566 8999973
No 368
>3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus}
Probab=52.32 E-value=14 Score=33.29 Aligned_cols=69 Identities=12% Similarity=0.124 Sum_probs=43.7
Q ss_pred cEEEEEeCC-hhHHHHHHHHHhcCCCcEEEEecCCCCCc----CC-CCCccccCCCCCCHHHHHHHHHHc--CCcEEEE
Q 010065 83 VVVLVIGGG-GREHALCYALKRSHSCDAVFCAPGNAGIS----NS-GDATCIPDLDVLDGDAVISFCRKW--SVGLVVV 153 (519)
Q Consensus 83 ~~vliiG~g-~~~~~l~~~l~~~~g~~~v~~~~~~~~~~----~~-~~~~~v~~~d~~d~~~l~~~~~~~--~id~Vi~ 153 (519)
++++|+|++ +....++..|.+. |.++++++.+..... .. .....+ ..|..+.+.+.+++++. .+|.++.
T Consensus 2 k~vlVTGas~gIG~~~a~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~-~~D~~~~~~v~~~~~~~~~~~d~lv~ 78 (230)
T 3guy_A 2 SLIVITGASSGLGAELAKLYDAE-GKATYLTGRSESKLSTVTNCLSNNVGYR-ARDLASHQEVEQLFEQLDSIPSTVVH 78 (230)
T ss_dssp -CEEEESTTSHHHHHHHHHHHHT-TCCEEEEESCHHHHHHHHHTCSSCCCEE-ECCTTCHHHHHHHHHSCSSCCSEEEE
T ss_pred CEEEEecCCchHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHHhhccCeE-eecCCCHHHHHHHHHHHhhcCCEEEE
Confidence 568899876 4566788888887 898887764321100 00 111222 57888888888887753 3588886
No 369
>2gzm_A Glutamate racemase; enzyme, isomerase; HET: DGL; 1.99A {Bacillus anthracis}
Probab=52.29 E-value=52 Score=30.65 Aligned_cols=95 Identities=11% Similarity=0.036 Sum_probs=47.4
Q ss_pred cEEEEEeCChhHHHHHHHHHhc-CCCcEEEEecCCCCCcCCCCCccccCCCCCCHHHHHHHHHHcCCcEEEECCChhhHH
Q 010065 83 VVVLVIGGGGREHALCYALKRS-HSCDAVFCAPGNAGISNSGDATCIPDLDVLDGDAVISFCRKWSVGLVVVGPEAPLVS 161 (519)
Q Consensus 83 ~~vliiG~g~~~~~l~~~l~~~-~g~~~v~~~~~~~~~~~~~~~~~v~~~d~~d~~~l~~~~~~~~id~Vi~g~E~~~~~ 161 (519)
+.|.|+.+|--...+.+.+++. ++.+.+++.+...........+.+. .-..+..+.+.+.++|+|+..+-.....
T Consensus 4 ~~IgvfDSGvGGltv~~~i~~~lP~~~~iy~~D~~~~Pyg~~s~~~i~----~~~~~~~~~L~~~g~d~iviaCNTas~~ 79 (267)
T 2gzm_A 4 RAIGVIDSGVGGLTVAKELIRQLPKERIIYLGDTARCPYGPRSREEVR----QFTWEMTEHLLDLNIKMLVIACNTATAV 79 (267)
T ss_dssp SCEEEEESSSTTHHHHHHHHHHCTTSCEEEEECTTTCCCTTSCHHHHH----HHHHHHHHHHHTTTCSEEEECCHHHHHH
T ss_pred CcEEEEeCCccHHHHHHHHHHHCCCCCEEEecCCCCCCCCCCCHHHHH----HHHHHHHHHHHHCCCCEEEEeCchhhHH
Confidence 3689997773334455666554 3556666543311100000001010 0012223334456899999976665422
Q ss_pred HHHHHHHHCCCCeeCCcHHH
Q 010065 162 GLANKLVKAGIPTFGPSSEA 181 (519)
Q Consensus 162 ~~a~~le~~gip~~g~~~~~ 181 (519)
.+...-+..++|++|....+
T Consensus 80 ~l~~lr~~~~iPvigi~ep~ 99 (267)
T 2gzm_A 80 VLEEMQKQLPIPVVGVIHPG 99 (267)
T ss_dssp HHHHHHHHCSSCEEESHHHH
T ss_pred HHHHHHHhCCCCEEeecHHH
Confidence 33344467899999753333
No 370
>3ctm_A Carbonyl reductase; alcohol dehydrogenase, short-chain dehydrogenases/reductases (SDR), X-RAY crystallography, oxidoreductase; 2.69A {Candida parapsilosis}
Probab=52.23 E-value=23 Score=32.91 Aligned_cols=71 Identities=14% Similarity=0.157 Sum_probs=43.4
Q ss_pred CccEEEEEeCC-hhHHHHHHHHHhcCCCcEEEEecCCCCCcCC--------CCCccccCCCCCCHHHHHHHHHH-----c
Q 010065 81 QRVVVLVIGGG-GREHALCYALKRSHSCDAVFCAPGNAGISNS--------GDATCIPDLDVLDGDAVISFCRK-----W 146 (519)
Q Consensus 81 ~~~~vliiG~g-~~~~~l~~~l~~~~g~~~v~~~~~~~~~~~~--------~~~~~v~~~d~~d~~~l~~~~~~-----~ 146 (519)
+.++++|+|++ +....++..|.+. |++++.++.+....... .....+ ..|..|.+.+.+++++ .
T Consensus 33 ~~k~vlITGasggIG~~la~~L~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~-~~Dl~~~~~~~~~~~~~~~~~g 110 (279)
T 3ctm_A 33 KGKVASVTGSSGGIGWAVAEAYAQA-GADVAIWYNSHPADEKAEHLQKTYGVHSKAY-KCNISDPKSVEETISQQEKDFG 110 (279)
T ss_dssp TTCEEEETTTTSSHHHHHHHHHHHH-TCEEEEEESSSCCHHHHHHHHHHHCSCEEEE-ECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHHHhcCCcceEE-EeecCCHHHHHHHHHHHHHHhC
Confidence 34689999866 3556788888887 88887775432211000 011122 4677777776666554 2
Q ss_pred CCcEEEE
Q 010065 147 SVGLVVV 153 (519)
Q Consensus 147 ~id~Vi~ 153 (519)
++|++|.
T Consensus 111 ~id~li~ 117 (279)
T 3ctm_A 111 TIDVFVA 117 (279)
T ss_dssp CCSEEEE
T ss_pred CCCEEEE
Confidence 5898887
No 371
>1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2
Probab=51.96 E-value=19 Score=33.53 Aligned_cols=71 Identities=15% Similarity=0.188 Sum_probs=43.1
Q ss_pred CccEEEEEeCC-hhHHHHHHHHHhcCCCcEEEEecCCCCCcC--------CCCCccccCCCCCCHHHHHHHHHH------
Q 010065 81 QRVVVLVIGGG-GREHALCYALKRSHSCDAVFCAPGNAGISN--------SGDATCIPDLDVLDGDAVISFCRK------ 145 (519)
Q Consensus 81 ~~~~vliiG~g-~~~~~l~~~l~~~~g~~~v~~~~~~~~~~~--------~~~~~~v~~~d~~d~~~l~~~~~~------ 145 (519)
+.++++|+|++ +....++..|.+. |.+++.++.+...... -.....+ ..|..|.+.+.+++++
T Consensus 20 ~~k~vlVTGas~gIG~aia~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~-~~D~~~~~~~~~~~~~~~~~~~ 97 (273)
T 1ae1_A 20 KGTTALVTGGSKGIGYAIVEELAGL-GARVYTCSRNEKELDECLEIWREKGLNVEGS-VCDLLSRTERDKLMQTVAHVFD 97 (273)
T ss_dssp TTCEEEEESCSSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHHTTCCEEEE-ECCTTCHHHHHHHHHHHHHHTT
T ss_pred CCCEEEEECCcchHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHHHhcCCceEEE-ECCCCCHHHHHHHHHHHHHHcC
Confidence 34789999976 4556788888887 8888776543110000 0011122 4677777666655543
Q ss_pred cCCcEEEE
Q 010065 146 WSVGLVVV 153 (519)
Q Consensus 146 ~~id~Vi~ 153 (519)
.++|+++.
T Consensus 98 g~id~lv~ 105 (273)
T 1ae1_A 98 GKLNILVN 105 (273)
T ss_dssp SCCCEEEE
T ss_pred CCCcEEEE
Confidence 36898887
No 372
>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444}
Probab=51.86 E-value=8.7 Score=37.06 Aligned_cols=71 Identities=18% Similarity=0.295 Sum_probs=44.0
Q ss_pred CccEEEEEeCC-hhHHHHHHHHHhcCCCcEEEEecCCCCCcC-------CC---CCccccCCCCCCHHHHHHHHHHc---
Q 010065 81 QRVVVLVIGGG-GREHALCYALKRSHSCDAVFCAPGNAGISN-------SG---DATCIPDLDVLDGDAVISFCRKW--- 146 (519)
Q Consensus 81 ~~~~vliiG~g-~~~~~l~~~l~~~~g~~~v~~~~~~~~~~~-------~~---~~~~v~~~d~~d~~~l~~~~~~~--- 146 (519)
..+++||+|++ +....+++.|.+. |++++.++.+...... .. ....+ ..|..|.+.+.++++..
T Consensus 7 ~~k~vlVTGas~gIG~~la~~l~~~-G~~Vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~-~~Dl~~~~~v~~~~~~~~~~ 84 (319)
T 3ioy_A 7 AGRTAFVTGGANGVGIGLVRQLLNQ-GCKVAIADIRQDSIDKALATLEAEGSGPEVMGV-QLDVASREGFKMAADEVEAR 84 (319)
T ss_dssp TTCEEEEETTTSTHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEE-ECCTTCHHHHHHHHHHHHHH
T ss_pred CCCEEEEcCCchHHHHHHHHHHHHC-CCEEEEEECCHHHHHHHHHHHHhcCCCCeEEEE-ECCCCCHHHHHHHHHHHHHh
Confidence 34689999965 4566788888887 8988776543111000 00 11122 56888877766665542
Q ss_pred --CCcEEEE
Q 010065 147 --SVGLVVV 153 (519)
Q Consensus 147 --~id~Vi~ 153 (519)
++|++|.
T Consensus 85 ~g~id~lv~ 93 (319)
T 3ioy_A 85 FGPVSILCN 93 (319)
T ss_dssp TCCEEEEEE
T ss_pred CCCCCEEEE
Confidence 6898887
No 373
>2bll_A Protein YFBG; decarboxylase, short chain dehydrogenase, L-ARA4N biosynthes methyltransferase, transferase; 2.3A {Escherichia coli} SCOP: c.2.1.2 PDB: 1u9j_A 1z73_A 1z75_A 1z7b_A 1z74_A
Probab=51.63 E-value=24 Score=33.70 Aligned_cols=68 Identities=18% Similarity=0.175 Sum_probs=38.7
Q ss_pred cEEEEEeCCh-hHHHHHHHHHhcCCCcEEEEecCCCCCcCC---CCCccccCCCCCC-HHHHHHHHHHcCCcEEEE
Q 010065 83 VVVLVIGGGG-REHALCYALKRSHSCDAVFCAPGNAGISNS---GDATCIPDLDVLD-GDAVISFCRKWSVGLVVV 153 (519)
Q Consensus 83 ~~vliiG~g~-~~~~l~~~l~~~~g~~~v~~~~~~~~~~~~---~~~~~v~~~d~~d-~~~l~~~~~~~~id~Vi~ 153 (519)
|+|||+|+.| ....++..|.+..|++++.++......... .....+ ..|..| .+.+.+.++ ++|+||-
T Consensus 1 m~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~-~~D~~~~~~~~~~~~~--~~d~vih 73 (345)
T 2bll_A 1 MRVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFLNHPHFHFV-EGDISIHSEWIEYHVK--KCDVVLP 73 (345)
T ss_dssp CEEEEETCSSHHHHHHHHHHHHSTTCEEEEEESCCGGGGGGTTCTTEEEE-ECCTTTCSHHHHHHHH--HCSEEEE
T ss_pred CeEEEECCCcHHHHHHHHHHHHhCCCEEEEEeCCcchHHHhhcCCCeEEE-eccccCcHHHHHhhcc--CCCEEEE
Confidence 5899999854 556678888765478877765432211110 011222 456655 234444444 5788886
No 374
>1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=51.57 E-value=16 Score=34.10 Aligned_cols=70 Identities=11% Similarity=0.163 Sum_probs=43.0
Q ss_pred ccEEEEEeCC-hhHHHHHHHHHhcCCCcEEEEecCCCCCc---------C--CCCCccccCCCCCCHHHHHHHHHHc---
Q 010065 82 RVVVLVIGGG-GREHALCYALKRSHSCDAVFCAPGNAGIS---------N--SGDATCIPDLDVLDGDAVISFCRKW--- 146 (519)
Q Consensus 82 ~~~vliiG~g-~~~~~l~~~l~~~~g~~~v~~~~~~~~~~---------~--~~~~~~v~~~d~~d~~~l~~~~~~~--- 146 (519)
.++++|+|++ +....++..|.+. |++++.++.+..... . ......+ ..|..|.+.+.+++++.
T Consensus 6 ~k~vlVTGas~gIG~~ia~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~-~~D~~~~~~~~~~~~~~~~~ 83 (278)
T 1spx_A 6 EKVAIITGSSNGIGRATAVLFARE-GAKVTITGRHAERLEETRQQILAAGVSEQNVNSV-VADVTTDAGQDEILSTTLGK 83 (278)
T ss_dssp TCEEEETTTTSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEE-ECCTTSHHHHHHHHHHHHHH
T ss_pred CCEEEEeCCCchHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHHHhcccCCCceeEE-ecccCCHHHHHHHHHHHHHH
Confidence 4678999865 4556788888877 888877654311000 0 0011122 46888877766665532
Q ss_pred --CCcEEEE
Q 010065 147 --SVGLVVV 153 (519)
Q Consensus 147 --~id~Vi~ 153 (519)
++|+++.
T Consensus 84 ~g~id~lv~ 92 (278)
T 1spx_A 84 FGKLDILVN 92 (278)
T ss_dssp HSCCCEEEE
T ss_pred cCCCCEEEE
Confidence 7999887
No 375
>3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition, oxidoreductase; HET: NAD; 2.00A {Brevibacterium saccharolyticum}
Probab=51.56 E-value=19 Score=33.24 Aligned_cols=69 Identities=20% Similarity=0.225 Sum_probs=42.2
Q ss_pred cEEEEEeCC-hhHHHHHHHHHhcCCCcEEEEecCCCC--CcC--------CCCCccccCCCCCCHHHHHHHHHHc-----
Q 010065 83 VVVLVIGGG-GREHALCYALKRSHSCDAVFCAPGNAG--ISN--------SGDATCIPDLDVLDGDAVISFCRKW----- 146 (519)
Q Consensus 83 ~~vliiG~g-~~~~~l~~~l~~~~g~~~v~~~~~~~~--~~~--------~~~~~~v~~~d~~d~~~l~~~~~~~----- 146 (519)
++++|+|++ +....+++.|.+. |.+++.++.+... ... ......+ ..|..|.+.+.+++++.
T Consensus 3 k~vlVTGas~gIG~~ia~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~-~~Dv~~~~~v~~~~~~~~~~~g 80 (258)
T 3a28_C 3 KVAMVTGGAQGIGRGISEKLAAD-GFDIAVADLPQQEEQAAETIKLIEAADQKAVFV-GLDVTDKANFDSAIDEAAEKLG 80 (258)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHH-TCEEEEEECGGGHHHHHHHHHHHHTTTCCEEEE-ECCTTCHHHHHHHHHHHHHHHT
T ss_pred CEEEEeCCCcHHHHHHHHHHHHC-CCEEEEEeCCcchHHHHHHHHHHHhcCCcEEEE-EccCCCHHHHHHHHHHHHHHhC
Confidence 678999866 4556788888887 8887776533111 000 0011122 46778877666655432
Q ss_pred CCcEEEE
Q 010065 147 SVGLVVV 153 (519)
Q Consensus 147 ~id~Vi~ 153 (519)
++|++|.
T Consensus 81 ~iD~lv~ 87 (258)
T 3a28_C 81 GFDVLVN 87 (258)
T ss_dssp CCCEEEE
T ss_pred CCCEEEE
Confidence 6899887
No 376
>2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2
Probab=51.48 E-value=16 Score=34.35 Aligned_cols=70 Identities=19% Similarity=0.238 Sum_probs=42.5
Q ss_pred ccEEEEEeCC-hhHHHHHHHHHhcCCCcEEEEecCCCCCcC--------CCCCccccCCCCCCHHHHHHHHHH-----cC
Q 010065 82 RVVVLVIGGG-GREHALCYALKRSHSCDAVFCAPGNAGISN--------SGDATCIPDLDVLDGDAVISFCRK-----WS 147 (519)
Q Consensus 82 ~~~vliiG~g-~~~~~l~~~l~~~~g~~~v~~~~~~~~~~~--------~~~~~~v~~~d~~d~~~l~~~~~~-----~~ 147 (519)
.++++|+|++ +....++..|.+. |.+++.+..+...... ......+ ..|..|.+.+.+++++ .+
T Consensus 44 ~k~vlITGasggIG~~la~~L~~~-G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~-~~Dl~d~~~v~~~~~~~~~~~~~ 121 (285)
T 2c07_A 44 NKVALVTGAGRGIGREIAKMLAKS-VSHVICISRTQKSCDSVVDEIKSFGYESSGY-AGDVSKKEEISEVINKILTEHKN 121 (285)
T ss_dssp SCEEEEESTTSHHHHHHHHHHTTT-SSEEEEEESSHHHHHHHHHHHHTTTCCEEEE-ECCTTCHHHHHHHHHHHHHHCSC
T ss_pred CCEEEEECCCcHHHHHHHHHHHHc-CCEEEEEcCCHHHHHHHHHHHHhcCCceeEE-ECCCCCHHHHHHHHHHHHHhcCC
Confidence 4689999866 3456788888876 8887775422110000 0011222 5688887777766654 26
Q ss_pred CcEEEE
Q 010065 148 VGLVVV 153 (519)
Q Consensus 148 id~Vi~ 153 (519)
+|+||.
T Consensus 122 id~li~ 127 (285)
T 2c07_A 122 VDILVN 127 (285)
T ss_dssp CCEEEE
T ss_pred CCEEEE
Confidence 999997
No 377
>1pjq_A CYSG, siroheme synthase; rossman fold, nucleotide binding motif, SAM, NAD, phosphoserine, transferase/oxidoreductase/lyase complex; HET: SEP PGE SAH; 2.21A {Salmonella typhimurium} SCOP: c.2.1.11 c.90.1.1 e.37.1.1 PDB: 1pjs_A* 1pjt_A*
Probab=51.43 E-value=16 Score=37.23 Aligned_cols=84 Identities=14% Similarity=0.094 Sum_probs=48.6
Q ss_pred CccEEEEEeCChhHHHHHHHHHhcCCCcEEEEecCCCC-CcCC---CCCcccc-CCCCCCHHHHHHHHHHcCCcEEEECC
Q 010065 81 QRVVVLVIGGGGREHALCYALKRSHSCDAVFCAPGNAG-ISNS---GDATCIP-DLDVLDGDAVISFCRKWSVGLVVVGP 155 (519)
Q Consensus 81 ~~~~vliiG~g~~~~~l~~~l~~~~g~~~v~~~~~~~~-~~~~---~~~~~v~-~~d~~d~~~l~~~~~~~~id~Vi~g~ 155 (519)
+.++|+|+|+|......+..|.+. |.++.++++.... .... .....+. .++. +.+ .+.|.|+...
T Consensus 11 ~~~~vlVvGgG~va~~k~~~L~~~-ga~V~vi~~~~~~~~~~l~~~~~i~~~~~~~~~---~~l------~~~~lVi~at 80 (457)
T 1pjq_A 11 RDRDCLIVGGGDVAERKARLLLEA-GARLTVNALTFIPQFTVWANEGMLTLVEGPFDE---TLL------DSCWLAIAAT 80 (457)
T ss_dssp BTCEEEEECCSHHHHHHHHHHHHT-TBEEEEEESSCCHHHHHHHTTTSCEEEESSCCG---GGG------TTCSEEEECC
T ss_pred CCCEEEEECCCHHHHHHHHHHHhC-cCEEEEEcCCCCHHHHHHHhcCCEEEEECCCCc---ccc------CCccEEEEcC
Confidence 357899999997655567777766 8888888764211 0000 0011110 1111 111 2578888854
Q ss_pred Chh-hHHHHHHHHHHCCCCe
Q 010065 156 EAP-LVSGLANKLVKAGIPT 174 (519)
Q Consensus 156 E~~-~~~~~a~~le~~gip~ 174 (519)
.+. ....+.+.+++.|+|+
T Consensus 81 ~~~~~n~~i~~~a~~~~i~v 100 (457)
T 1pjq_A 81 DDDTVNQRVSDAAESRRIFC 100 (457)
T ss_dssp SCHHHHHHHHHHHHHTTCEE
T ss_pred CCHHHHHHHHHHHHHcCCEE
Confidence 444 4556777788889886
No 378
>1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=51.39 E-value=8.3 Score=36.77 Aligned_cols=70 Identities=9% Similarity=0.170 Sum_probs=42.9
Q ss_pred ccEEEEEeCC-hhHHHHHHHHHhcCCCcEEEEecCCCCCcCC--------C---CCccccCCCCCCHHHHHHHHHHc---
Q 010065 82 RVVVLVIGGG-GREHALCYALKRSHSCDAVFCAPGNAGISNS--------G---DATCIPDLDVLDGDAVISFCRKW--- 146 (519)
Q Consensus 82 ~~~vliiG~g-~~~~~l~~~l~~~~g~~~v~~~~~~~~~~~~--------~---~~~~v~~~d~~d~~~l~~~~~~~--- 146 (519)
.++++|+|++ +....+++.|.+. |++++.++.+....... . ....+ ..|..|.+.+.+++++.
T Consensus 26 ~k~vlVTGas~gIG~aia~~L~~~-G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~-~~Dv~d~~~v~~~~~~~~~~ 103 (297)
T 1xhl_A 26 GKSVIITGSSNGIGRSAAVIFAKE-GAQVTITGRNEDRLEETKQQILKAGVPAEKINAV-VADVTEASGQDDIINTTLAK 103 (297)
T ss_dssp TCEEEETTCSSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEE-ECCTTSHHHHHHHHHHHHHH
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHHHhcCCCCceEEEE-ecCCCCHHHHHHHHHHHHHh
Confidence 4678888866 4556788888887 89887775431100000 0 11122 56888877766665532
Q ss_pred --CCcEEEE
Q 010065 147 --SVGLVVV 153 (519)
Q Consensus 147 --~id~Vi~ 153 (519)
++|++|.
T Consensus 104 ~g~iD~lvn 112 (297)
T 1xhl_A 104 FGKIDILVN 112 (297)
T ss_dssp HSCCCEEEE
T ss_pred cCCCCEEEE
Confidence 7899887
No 379
>1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=51.34 E-value=8.4 Score=36.24 Aligned_cols=70 Identities=13% Similarity=0.229 Sum_probs=43.1
Q ss_pred ccEEEEEeCC-hhHHHHHHHHHhcCCCcEEEEecCCCCCcC-------CC----CCccccCCCCCCHHHHHHHHHHc---
Q 010065 82 RVVVLVIGGG-GREHALCYALKRSHSCDAVFCAPGNAGISN-------SG----DATCIPDLDVLDGDAVISFCRKW--- 146 (519)
Q Consensus 82 ~~~vliiG~g-~~~~~l~~~l~~~~g~~~v~~~~~~~~~~~-------~~----~~~~v~~~d~~d~~~l~~~~~~~--- 146 (519)
.++++|+|++ +....+++.|.+. |++++.++.+...... .. ....+ ..|..|.+.+.+++++.
T Consensus 6 ~k~vlVTGas~gIG~~ia~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~-~~Dv~~~~~v~~~~~~~~~~ 83 (280)
T 1xkq_A 6 NKTVIITGSSNGIGRTTAILFAQE-GANVTITGRSSERLEETRQIILKSGVSEKQVNSV-VADVTTEDGQDQIINSTLKQ 83 (280)
T ss_dssp TCEEEETTCSSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHTTTCCGGGEEEE-ECCTTSHHHHHHHHHHHHHH
T ss_pred CCEEEEECCCChHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHHHHcCCCCcceEEE-EecCCCHHHHHHHHHHHHHh
Confidence 4678999866 4556788888887 8988777543110000 00 11122 56888877766665532
Q ss_pred --CCcEEEE
Q 010065 147 --SVGLVVV 153 (519)
Q Consensus 147 --~id~Vi~ 153 (519)
++|++|.
T Consensus 84 ~g~iD~lv~ 92 (280)
T 1xkq_A 84 FGKIDVLVN 92 (280)
T ss_dssp HSCCCEEEE
T ss_pred cCCCCEEEE
Confidence 6999987
No 380
>2wyu_A Enoyl-[acyl carrier protein] reductase; oxidoreductase, fatty acid biosynthesis, oxidation reduction; 1.50A {Thermus thermophilus} PDB: 1ulu_A 2wyv_A* 2wyw_A* 2yw9_A*
Probab=51.31 E-value=16 Score=33.80 Aligned_cols=70 Identities=16% Similarity=0.158 Sum_probs=42.8
Q ss_pred ccEEEEEeCC---hhHHHHHHHHHhcCCCcEEEEecCCCC---CcC----CCCCccccCCCCCCHHHHHHHHHHc-----
Q 010065 82 RVVVLVIGGG---GREHALCYALKRSHSCDAVFCAPGNAG---ISN----SGDATCIPDLDVLDGDAVISFCRKW----- 146 (519)
Q Consensus 82 ~~~vliiG~g---~~~~~l~~~l~~~~g~~~v~~~~~~~~---~~~----~~~~~~v~~~d~~d~~~l~~~~~~~----- 146 (519)
.++++|+|++ +....++..|.+. |.+++.++.+... ... ......+ ..|..|.+.+.+++++.
T Consensus 8 ~k~vlVTGas~~~gIG~~ia~~l~~~-G~~V~~~~r~~~~~~~~~~l~~~~~~~~~~-~~D~~~~~~v~~~~~~~~~~~g 85 (261)
T 2wyu_A 8 GKKALVMGVTNQRSLGFAIAAKLKEA-GAEVALSYQAERLRPEAEKLAEALGGALLF-RADVTQDEELDALFAGVKEAFG 85 (261)
T ss_dssp TCEEEEESCCSSSSHHHHHHHHHHHH-TCEEEEEESCGGGHHHHHHHHHHTTCCEEE-ECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCEEEEECCCCCCcHHHHHHHHHHHC-CCEEEEEcCCHHHHHHHHHHHHhcCCcEEE-ECCCCCHHHHHHHHHHHHHHcC
Confidence 4689999974 5667788999887 8888776543210 000 0011222 46777776666655532
Q ss_pred CCcEEEE
Q 010065 147 SVGLVVV 153 (519)
Q Consensus 147 ~id~Vi~ 153 (519)
++|.++.
T Consensus 86 ~iD~lv~ 92 (261)
T 2wyu_A 86 GLDYLVH 92 (261)
T ss_dssp SEEEEEE
T ss_pred CCCEEEE
Confidence 6888887
No 381
>3upl_A Oxidoreductase; rossmann fold, NADPH binding; 1.50A {Brucella melitensis biovar abortus 230ORGANISM_TAXID} PDB: 3upy_A*
Probab=51.27 E-value=38 Score=34.39 Aligned_cols=139 Identities=12% Similarity=0.091 Sum_probs=75.8
Q ss_pred CccEEEEEeCChhHHHHHHHHHhcCCCcEEEEecCCCCCcCC------CC---------Ccccc-------CCCCCCHHH
Q 010065 81 QRVVVLVIGGGGREHALCYALKRSHSCDAVFCAPGNAGISNS------GD---------ATCIP-------DLDVLDGDA 138 (519)
Q Consensus 81 ~~~~vliiG~g~~~~~l~~~l~~~~g~~~v~~~~~~~~~~~~------~~---------~~~v~-------~~d~~d~~~ 138 (519)
++.+|.|||.|......+..+.+..+++++.+.+.++..... .. ...+. ..-..|.+.
T Consensus 22 k~IRVGIIGaG~iG~~~~~~l~~~~~veLvAV~D~~~era~~~a~~~yG~~~~~~~~~~~~~i~~a~~~g~~~v~~D~ee 101 (446)
T 3upl_A 22 KPIRIGLIGAGEMGTDIVTQVARMQGIEVGALSARRLPNTFKAIRTAYGDEENAREATTESAMTRAIEAGKIAVTDDNDL 101 (446)
T ss_dssp CCEEEEEECCSHHHHHHHHHHTTSSSEEEEEEECSSTHHHHHHHHHHHSSSTTEEECSSHHHHHHHHHTTCEEEESCHHH
T ss_pred CceEEEEECChHHHHHHHHHHhhCCCcEEEEEEeCCHHHHHHHHHHhcCCccccccccchhhhhhhhccCCceEECCHHH
Confidence 357999999996555556666665677777665443321100 00 00000 001234444
Q ss_pred HHHHHHHcCCcEEEEC-CChhhHHHHHHHHHHCCCCeeCCcHHHHHHhcCHHHHHHHHHHcCCCCCCeeecCC-----HH
Q 010065 139 VISFCRKWSVGLVVVG-PEAPLVSGLANKLVKAGIPTFGPSSEAAALEGSKNFMKNLCDKYGIPTAKYKTFTD-----PN 212 (519)
Q Consensus 139 l~~~~~~~~id~Vi~g-~E~~~~~~~a~~le~~gip~~g~~~~~~~~~~dK~~~k~~l~~~Gi~~p~~~~v~~-----~~ 212 (519)
+ +...++|+|+.. +....-..++...-+.|.+++...... ....=..+.++.+++|+.. ..... .-
T Consensus 102 L---L~d~dIDaVviaTp~p~~H~e~a~~AL~AGKHVv~~nk~l--~~~eg~eL~~~A~e~Gvvl---~~~~gdqp~~~~ 173 (446)
T 3upl_A 102 I---LSNPLIDVIIDATGIPEVGAETGIAAIRNGKHLVMMNVEA--DVTIGPYLKAQADKQGVIY---SLGAGDEPSSCM 173 (446)
T ss_dssp H---HTCTTCCEEEECSCCHHHHHHHHHHHHHTTCEEEECCHHH--HHHHHHHHHHHHHHHTCCE---EECTTSHHHHHH
T ss_pred H---hcCCCCCEEEEcCCChHHHHHHHHHHHHcCCcEEecCccc--CHHHHHHHHHHHHHhCCee---eecCCcchHHHH
Confidence 4 445579999963 222121234445567799988434432 1223456778888888753 22221 23
Q ss_pred HHHHHHHHhCCCEEE
Q 010065 213 AAKQYIQEEGAPIVV 227 (519)
Q Consensus 213 ~~~~~~~~~g~P~Vv 227 (519)
++.+++...|+++|.
T Consensus 174 eLv~~a~~~G~~~v~ 188 (446)
T 3upl_A 174 ELIEFVSALGYEVVS 188 (446)
T ss_dssp HHHHHHHHTTCEEEE
T ss_pred HHHHHHHhCCCeEEE
Confidence 567778889988665
No 382
>2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A*
Probab=51.22 E-value=15 Score=33.98 Aligned_cols=70 Identities=16% Similarity=0.124 Sum_probs=41.9
Q ss_pred ccEEEEEeCC-hhHHHHHHHHHhcCCCcEEEEecCCCCCcC--------CCCCccccCCCCCCHHHHHHHHHHc-----C
Q 010065 82 RVVVLVIGGG-GREHALCYALKRSHSCDAVFCAPGNAGISN--------SGDATCIPDLDVLDGDAVISFCRKW-----S 147 (519)
Q Consensus 82 ~~~vliiG~g-~~~~~l~~~l~~~~g~~~v~~~~~~~~~~~--------~~~~~~v~~~d~~d~~~l~~~~~~~-----~ 147 (519)
.++++|+|++ +....++..|.+. |++++.++.+...... ......+ ..|..|.+.+.+++++. +
T Consensus 14 ~k~vlVTGas~gIG~~ia~~l~~~-G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~-~~D~~~~~~~~~~~~~~~~~~g~ 91 (260)
T 2zat_A 14 NKVALVTASTDGIGLAIARRLAQD-GAHVVVSSRKQENVDRTVATLQGEGLSVTGT-VCHVGKAEDRERLVAMAVNLHGG 91 (260)
T ss_dssp TCEEEESSCSSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHHTTCCEEEE-ECCTTCHHHHHHHHHHHHHHHSC
T ss_pred CCEEEEECCCcHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHHHhcCCceEEE-EccCCCHHHHHHHHHHHHHHcCC
Confidence 4789999866 4556788888887 8888776533110000 0011112 46777766665555432 6
Q ss_pred CcEEEE
Q 010065 148 VGLVVV 153 (519)
Q Consensus 148 id~Vi~ 153 (519)
+|.++.
T Consensus 92 iD~lv~ 97 (260)
T 2zat_A 92 VDILVS 97 (260)
T ss_dssp CCEEEE
T ss_pred CCEEEE
Confidence 898887
No 383
>1nvm_B Acetaldehyde dehydrogenase (acylating), 4-hydroxy-2-oxovalerate aldolase; sequestered tunnel, substrate channeling; HET: NAD; 1.70A {Pseudomonas SP} SCOP: c.2.1.3 d.81.1.1
Probab=51.01 E-value=19 Score=34.67 Aligned_cols=98 Identities=16% Similarity=0.126 Sum_probs=50.1
Q ss_pred CccEEEEEeCChhHHHHHHHHHh-cCCCcEEEEecCCCCCcCCCCCccccCCC--CCCHHHHHHHHHHcCCcEEEECCCh
Q 010065 81 QRVVVLVIGGGGREHALCYALKR-SHSCDAVFCAPGNAGISNSGDATCIPDLD--VLDGDAVISFCRKWSVGLVVVGPEA 157 (519)
Q Consensus 81 ~~~~vliiG~g~~~~~l~~~l~~-~~g~~~v~~~~~~~~~~~~~~~~~v~~~d--~~d~~~l~~~~~~~~id~Vi~g~E~ 157 (519)
++++|.|+|.|.....++..+.+ ..+.+.+.+.+.++........... ... ..+.+.+++.....++|+|+...-.
T Consensus 3 ~~irVaIIG~G~iG~~~~~~l~~~~~~~elvav~d~~~~~~~~~~a~~~-g~~~~~~~~e~ll~~~~~~~iDvV~~atp~ 81 (312)
T 1nvm_B 3 QKLKVAIIGSGNIGTDLMIKVLRNAKYLEMGAMVGIDAASDGLARAQRM-GVTTTYAGVEGLIKLPEFADIDFVFDATSA 81 (312)
T ss_dssp SCEEEEEECCSHHHHHHHHHHHHHCSSEEEEEEECSCTTCHHHHHHHHT-TCCEESSHHHHHHHSGGGGGEEEEEECSCH
T ss_pred CCCEEEEEcCcHHHHHHHHHHHhhCcCeEEEEEEeCChhhhHHHHHHHc-CCCcccCCHHHHHhccCCCCCcEEEECCCh
Confidence 45799999999665556667754 5577766665443322000000111 111 2234444321112568999984323
Q ss_pred hhHHHHHHHHHHC--CCCeeCCcH
Q 010065 158 PLVSGLANKLVKA--GIPTFGPSS 179 (519)
Q Consensus 158 ~~~~~~a~~le~~--gip~~g~~~ 179 (519)
..-..++..+.+. |.+++-.++
T Consensus 82 ~~h~~~a~~al~a~~Gk~Vi~ekp 105 (312)
T 1nvm_B 82 SAHVQNEALLRQAKPGIRLIDLTP 105 (312)
T ss_dssp HHHHHHHHHHHHHCTTCEEEECST
T ss_pred HHHHHHHHHHHHhCCCCEEEEcCc
Confidence 3323444445556 888764443
No 384
>4iiu_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAP; 2.10A {Escherichia coli} PDB: 4iiv_A*
Probab=51.00 E-value=15 Score=34.17 Aligned_cols=70 Identities=20% Similarity=0.171 Sum_probs=42.9
Q ss_pred ccEEEEEeCC-hhHHHHHHHHHhcCCCcEEEEecCCCCC-c--------CCCCCccccCCCCCCHHHHHHHHHHc-----
Q 010065 82 RVVVLVIGGG-GREHALCYALKRSHSCDAVFCAPGNAGI-S--------NSGDATCIPDLDVLDGDAVISFCRKW----- 146 (519)
Q Consensus 82 ~~~vliiG~g-~~~~~l~~~l~~~~g~~~v~~~~~~~~~-~--------~~~~~~~v~~~d~~d~~~l~~~~~~~----- 146 (519)
.++++|+|++ +....+++.|.+. |++++++...+... . .......+ ..|..|.+.+.+++++.
T Consensus 26 ~k~vlVTGas~gIG~~la~~l~~~-G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~-~~Dl~~~~~~~~~~~~~~~~~g 103 (267)
T 4iiu_A 26 SRSVLVTGASKGIGRAIARQLAAD-GFNIGVHYHRDAAGAQETLNAIVANGGNGRLL-SFDVANREQCREVLEHEIAQHG 103 (267)
T ss_dssp CCEEEETTTTSHHHHHHHHHHHHT-TCEEEEEESSCHHHHHHHHHHHHHTTCCEEEE-ECCTTCHHHHHHHHHHHHHHHC
T ss_pred CCEEEEECCCChHHHHHHHHHHHC-CCEEEEEeCCchHHHHHHHHHHHhcCCceEEE-EecCCCHHHHHHHHHHHHHHhC
Confidence 3678888866 4556788888877 88876654322110 0 00111222 56888877776666542
Q ss_pred CCcEEEE
Q 010065 147 SVGLVVV 153 (519)
Q Consensus 147 ~id~Vi~ 153 (519)
++|+++.
T Consensus 104 ~id~li~ 110 (267)
T 4iiu_A 104 AWYGVVS 110 (267)
T ss_dssp CCSEEEE
T ss_pred CccEEEE
Confidence 7999987
No 385
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=50.99 E-value=12 Score=32.51 Aligned_cols=89 Identities=16% Similarity=0.084 Sum_probs=46.7
Q ss_pred ccEEEEEeCChhHHHHHHHHHhcCCCcEEEEecCCCCCcCC--CCCccccCCCCCCHHHHHHHHHHcCCcEEEEC-CChh
Q 010065 82 RVVVLVIGGGGREHALCYALKRSHSCDAVFCAPGNAGISNS--GDATCIPDLDVLDGDAVISFCRKWSVGLVVVG-PEAP 158 (519)
Q Consensus 82 ~~~vliiG~g~~~~~l~~~l~~~~g~~~v~~~~~~~~~~~~--~~~~~v~~~d~~d~~~l~~~~~~~~id~Vi~g-~E~~ 158 (519)
+++|+|+|.|.....+++.|.+..|+++++++.+....... .....+ ..|..+.+.+.+...-.+.|.|+.. +.+.
T Consensus 39 ~~~v~IiG~G~~G~~~a~~L~~~~g~~V~vid~~~~~~~~~~~~g~~~~-~gd~~~~~~l~~~~~~~~ad~vi~~~~~~~ 117 (183)
T 3c85_A 39 HAQVLILGMGRIGTGAYDELRARYGKISLGIEIREEAAQQHRSEGRNVI-SGDATDPDFWERILDTGHVKLVLLAMPHHQ 117 (183)
T ss_dssp TCSEEEECCSHHHHHHHHHHHHHHCSCEEEEESCHHHHHHHHHTTCCEE-ECCTTCHHHHHTBCSCCCCCEEEECCSSHH
T ss_pred CCcEEEECCCHHHHHHHHHHHhccCCeEEEEECCHHHHHHHHHCCCCEE-EcCCCCHHHHHhccCCCCCCEEEEeCCChH
Confidence 46799999997777788888653268888776442111000 011112 3455565544322012357888873 4343
Q ss_pred hHHHHHHHHHHCC
Q 010065 159 LVSGLANKLVKAG 171 (519)
Q Consensus 159 ~~~~~a~~le~~g 171 (519)
....+...+...+
T Consensus 118 ~~~~~~~~~~~~~ 130 (183)
T 3c85_A 118 GNQTALEQLQRRN 130 (183)
T ss_dssp HHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHC
Confidence 3333444455554
No 386
>4gqa_A NAD binding oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: MSE; 2.42A {Klebsiella pneumoniae}
Probab=50.99 E-value=2.6 Score=42.43 Aligned_cols=118 Identities=17% Similarity=0.128 Sum_probs=56.7
Q ss_pred CCCccEEEEEeCChhHHHHHHHHHhc--------CCCcEEEEecCCCCCcCCCCCccccCC--CCCCHHHHHHHHHHcCC
Q 010065 79 AGQRVVVLVIGGGGREHALCYALKRS--------HSCDAVFCAPGNAGISNSGDATCIPDL--DVLDGDAVISFCRKWSV 148 (519)
Q Consensus 79 ~~~~~~vliiG~g~~~~~l~~~l~~~--------~g~~~v~~~~~~~~~~~~~~~~~v~~~--d~~d~~~l~~~~~~~~i 148 (519)
|.+|+||.|||.|.....-+..+++. .+++++.+.+.++..... .+..+ .+ -..|.+++ +...++
T Consensus 23 Ms~klrvgiIG~G~ig~~h~~~~~~~~~~~~~~~~~~elvav~d~~~~~a~~-~a~~~-~~~~~y~d~~~l---l~~~~v 97 (412)
T 4gqa_A 23 MSARLNIGLIGSGFMGQAHADAYRRAAMFYPDLPKRPHLYALADQDQAMAER-HAAKL-GAEKAYGDWREL---VNDPQV 97 (412)
T ss_dssp --CEEEEEEECCSHHHHHHHHHHHHHHHHCTTSSSEEEEEEEECSSHHHHHH-HHHHH-TCSEEESSHHHH---HHCTTC
T ss_pred ccccceEEEEcCcHHHHHHHHHHHhccccccccCCCeEEEEEEcCCHHHHHH-HHHHc-CCCeEECCHHHH---hcCCCC
Confidence 44578999999996443334444432 134555543322211000 00111 11 12345554 456689
Q ss_pred cEEEECCChhhHHHHHHHHHHCCCCeeCCcHHHHHHhcCHHHHHHHHHHcCCCC
Q 010065 149 GLVVVGPEAPLVSGLANKLVKAGIPTFGPSSEAAALEGSKNFMKNLCDKYGIPT 202 (519)
Q Consensus 149 d~Vi~g~E~~~~~~~a~~le~~gip~~g~~~~~~~~~~dK~~~k~~l~~~Gi~~ 202 (519)
|+|+...-...-..++..+-+.|.+++.-.|-+... .+=..+.++.++.|+..
T Consensus 98 D~V~I~tp~~~H~~~~~~al~aGkhVl~EKP~a~~~-~ea~~l~~~a~~~g~~~ 150 (412)
T 4gqa_A 98 DVVDITSPNHLHYTMAMAAIAAGKHVYCEKPLAVNE-QQAQEMAQAARRAGVKT 150 (412)
T ss_dssp CEEEECSCGGGHHHHHHHHHHTTCEEEEESCSCSSH-HHHHHHHHHHHHHTCCE
T ss_pred CEEEECCCcHHHHHHHHHHHHcCCCeEeecCCcCCH-HHHHHHHHHHHHhCCee
Confidence 999986544443345555566788776333322211 11123345566777654
No 387
>2gn4_A FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann fold, TYK triad, SDR, enzyme, NADP, NADPH, lyase; HET: NDP UD1 MES; 1.90A {Helicobacter pylori} PDB: 2gn6_A* 2gn8_A* 2gn9_A* 2gna_A*
Probab=50.90 E-value=13 Score=36.28 Aligned_cols=74 Identities=12% Similarity=0.099 Sum_probs=44.5
Q ss_pred CCCCCccEEEEEeCC-hhHHHHHHHHHhcCCC-cEEEEecCCCCCc----C--CCCCccccCCCCCCHHHHHHHHHHcCC
Q 010065 77 TNAGQRVVVLVIGGG-GREHALCYALKRSHSC-DAVFCAPGNAGIS----N--SGDATCIPDLDVLDGDAVISFCRKWSV 148 (519)
Q Consensus 77 ~~~~~~~~vliiG~g-~~~~~l~~~l~~~~g~-~~v~~~~~~~~~~----~--~~~~~~v~~~d~~d~~~l~~~~~~~~i 148 (519)
....+.++|||+|++ +....++..|.+..|. +++.++.+..... . ......+ ..|..|.+.+.++++ ++
T Consensus 16 ~~~~~~k~vlVTGatG~iG~~l~~~L~~~~g~~~V~~~~r~~~~~~~~~~~~~~~~v~~~-~~Dl~d~~~l~~~~~--~~ 92 (344)
T 2gn4_A 16 QNMLDNQTILITGGTGSFGKCFVRKVLDTTNAKKIIVYSRDELKQSEMAMEFNDPRMRFF-IGDVRDLERLNYALE--GV 92 (344)
T ss_dssp CCTTTTCEEEEETTTSHHHHHHHHHHHHHCCCSEEEEEESCHHHHHHHHHHHCCTTEEEE-ECCTTCHHHHHHHTT--TC
T ss_pred HHhhCCCEEEEECCCcHHHHHHHHHHHhhCCCCEEEEEECChhhHHHHHHHhcCCCEEEE-ECCCCCHHHHHHHHh--cC
Confidence 344456899999975 4556778888765466 6665543311000 0 0111222 568888888777664 68
Q ss_pred cEEEE
Q 010065 149 GLVVV 153 (519)
Q Consensus 149 d~Vi~ 153 (519)
|+||-
T Consensus 93 D~Vih 97 (344)
T 2gn4_A 93 DICIH 97 (344)
T ss_dssp SEEEE
T ss_pred CEEEE
Confidence 99997
No 388
>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis}
Probab=50.74 E-value=9.6 Score=35.57 Aligned_cols=71 Identities=15% Similarity=0.264 Sum_probs=40.8
Q ss_pred CccEEEEEeCC-hhHHHHHHHHHhcCCCcEEEEecCCCCCcC---------CCCCccccCCCCCCHHHHHHHHHH-----
Q 010065 81 QRVVVLVIGGG-GREHALCYALKRSHSCDAVFCAPGNAGISN---------SGDATCIPDLDVLDGDAVISFCRK----- 145 (519)
Q Consensus 81 ~~~~vliiG~g-~~~~~l~~~l~~~~g~~~v~~~~~~~~~~~---------~~~~~~v~~~d~~d~~~l~~~~~~----- 145 (519)
+.++++|.|++ +....+++.|.+. |.++++++.+...... -.....+ ..|..|.+.+.+++++
T Consensus 19 ~~k~vlVTGas~gIG~aia~~l~~~-G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~-~~Dv~~~~~v~~~~~~~~~~~ 96 (266)
T 4egf_A 19 DGKRALITGATKGIGADIARAFAAA-GARLVLSGRDVSELDAARRALGEQFGTDVHTV-AIDLAEPDAPAELARRAAEAF 96 (266)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHHHHCCCEEEE-ECCTTSTTHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHHHHhcCCcEEEE-EecCCCHHHHHHHHHHHHHHc
Confidence 35788999866 4566788888887 8888776543111000 0011122 4566665544444432
Q ss_pred cCCcEEEE
Q 010065 146 WSVGLVVV 153 (519)
Q Consensus 146 ~~id~Vi~ 153 (519)
-++|+++.
T Consensus 97 g~id~lv~ 104 (266)
T 4egf_A 97 GGLDVLVN 104 (266)
T ss_dssp TSCSEEEE
T ss_pred CCCCEEEE
Confidence 26898887
No 389
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=50.58 E-value=14 Score=37.85 Aligned_cols=75 Identities=11% Similarity=0.144 Sum_probs=46.6
Q ss_pred CccEEEEEeCChhHHHHHHHHHhcCCCcEEEEecCCCCCcCC---CCCccccCCCCCCHHHHHHHHHHcCCcEEEE-CCC
Q 010065 81 QRVVVLVIGGGGREHALCYALKRSHSCDAVFCAPGNAGISNS---GDATCIPDLDVLDGDAVISFCRKWSVGLVVV-GPE 156 (519)
Q Consensus 81 ~~~~vliiG~g~~~~~l~~~l~~~~g~~~v~~~~~~~~~~~~---~~~~~v~~~d~~d~~~l~~~~~~~~id~Vi~-g~E 156 (519)
+.|+|+|+|+|.....+++.|.+. |+++++++.+....... -+...+ .-|..+++-|.+ +.-.+.|+++. .+.
T Consensus 2 ~~M~iiI~G~G~vG~~la~~L~~~-~~~v~vId~d~~~~~~~~~~~~~~~i-~Gd~~~~~~L~~-Agi~~ad~~ia~t~~ 78 (461)
T 4g65_A 2 NAMKIIILGAGQVGGTLAENLVGE-NNDITIVDKDGDRLRELQDKYDLRVV-NGHASHPDVLHE-AGAQDADMLVAVTNT 78 (461)
T ss_dssp CCEEEEEECCSHHHHHHHHHTCST-TEEEEEEESCHHHHHHHHHHSSCEEE-ESCTTCHHHHHH-HTTTTCSEEEECCSC
T ss_pred CcCEEEEECCCHHHHHHHHHHHHC-CCCEEEEECCHHHHHHHHHhcCcEEE-EEcCCCHHHHHh-cCCCcCCEEEEEcCC
Confidence 468999999997667788888665 89999887542111111 011223 456777665543 44456888887 344
Q ss_pred hh
Q 010065 157 AP 158 (519)
Q Consensus 157 ~~ 158 (519)
|.
T Consensus 79 De 80 (461)
T 4g65_A 79 DE 80 (461)
T ss_dssp HH
T ss_pred hH
Confidence 43
No 390
>3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile}
Probab=50.57 E-value=44 Score=31.89 Aligned_cols=33 Identities=21% Similarity=0.293 Sum_probs=25.1
Q ss_pred CccEEEEEeCC-hhHHHHHHHHHhcCCCcEEEEec
Q 010065 81 QRVVVLVIGGG-GREHALCYALKRSHSCDAVFCAP 114 (519)
Q Consensus 81 ~~~~vliiG~g-~~~~~l~~~l~~~~g~~~v~~~~ 114 (519)
+.++++|+|++ +....++..|.+. |.++++++.
T Consensus 45 ~gk~~lVTGas~GIG~aia~~la~~-G~~Vv~~~~ 78 (317)
T 3oec_A 45 QGKVAFITGAARGQGRTHAVRLAQD-GADIVAIDL 78 (317)
T ss_dssp TTCEEEESSCSSHHHHHHHHHHHHT-TCEEEEEEC
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHC-CCeEEEEec
Confidence 35788999866 4566788999887 998887753
No 391
>3ist_A Glutamate racemase; structural genomics, cell WALL biogenesis/degradation, isomerase, peptidoglycan synthesis; HET: MSE; 1.65A {Listeria monocytogenes} PDB: 3hfr_A* 3isv_A*
Probab=50.57 E-value=57 Score=30.57 Aligned_cols=84 Identities=12% Similarity=0.143 Sum_probs=49.0
Q ss_pred cEEEEEeCChhHHHHHHHHHhc-CCCcEEEEecCCCCCcCCCCCccccCCCCCCHHH-------HHHHHHHcCCcEEEEC
Q 010065 83 VVVLVIGGGGREHALCYALKRS-HSCDAVFCAPGNAGISNSGDATCIPDLDVLDGDA-------VISFCRKWSVGLVVVG 154 (519)
Q Consensus 83 ~~vliiG~g~~~~~l~~~l~~~-~g~~~v~~~~~~~~~~~~~~~~~v~~~d~~d~~~-------l~~~~~~~~id~Vi~g 154 (519)
..|+|+.+|--...+.+.+++. ++.+.+++.+.. .. +.-....+. ..+.+.+.++|+++..
T Consensus 6 ~~IgvfDSGvGGltv~~~i~~~lP~~~~iy~~D~a----------~~-PYG~ks~~~i~~~~~~~~~~L~~~g~~~IVIA 74 (269)
T 3ist_A 6 QAIGFIDSGVGGLTVVREVLKQLPHEQVYYLGDTA----------RC-PYGPRDKEEVAKFTWEMTNFLVDRGIKMLVIA 74 (269)
T ss_dssp CCEEEEESSSTTHHHHHHHHHHCTTCCEEEEECGG----------GC-CCTTSCHHHHHHHHHHHHHHHHHTTCSEEEEC
T ss_pred CcEEEEECCccHHHHHHHHHHHCCCCcEEEEeCCC----------CC-CCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEe
Confidence 4699998874334456666655 366677664331 11 111222222 3344556789999997
Q ss_pred CChhhHHHHHHHHHHCCCCeeCC
Q 010065 155 PEAPLVSGLANKLVKAGIPTFGP 177 (519)
Q Consensus 155 ~E~~~~~~~a~~le~~gip~~g~ 177 (519)
+.+.....+...-+..++|++|.
T Consensus 75 CNTa~~~al~~lr~~~~iPvigi 97 (269)
T 3ist_A 75 CNTATAAALYDIREKLDIPVIGV 97 (269)
T ss_dssp CHHHHHHHHHHHHHHCSSCEEES
T ss_pred CCCccHHHHHHHHHhcCCCEEee
Confidence 76665323334445679999974
No 392
>3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} SCOP: c.2.1.2 PDB: 3rsh_A* 3rro_A* 4i08_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E
Probab=50.16 E-value=15 Score=33.84 Aligned_cols=71 Identities=18% Similarity=0.283 Sum_probs=44.5
Q ss_pred CccEEEEEeCC-hhHHHHHHHHHhcCCCcEEEEecCCCCCcC----C-CCCccccCCCCCCHHHHHHHHHHc-----CCc
Q 010065 81 QRVVVLVIGGG-GREHALCYALKRSHSCDAVFCAPGNAGISN----S-GDATCIPDLDVLDGDAVISFCRKW-----SVG 149 (519)
Q Consensus 81 ~~~~vliiG~g-~~~~~l~~~l~~~~g~~~v~~~~~~~~~~~----~-~~~~~v~~~d~~d~~~l~~~~~~~-----~id 149 (519)
+.++++|+|++ +....+++.|.+. |.+++.++.+...... . .....+ ..|..|.+.+.+++++. ++|
T Consensus 8 ~gk~~lVTGas~gIG~a~a~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~-~~Dv~d~~~v~~~~~~~~~~~g~iD 85 (248)
T 3op4_A 8 EGKVALVTGASRGIGKAIAELLAER-GAKVIGTATSESGAQAISDYLGDNGKGM-ALNVTNPESIEAVLKAITDEFGGVD 85 (248)
T ss_dssp TTCEEEESSCSSHHHHHHHHHHHHT-TCEEEEEESSHHHHHHHHHHHGGGEEEE-ECCTTCHHHHHHHHHHHHHHHCCCS
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHhcccceEE-EEeCCCHHHHHHHHHHHHHHcCCCC
Confidence 35789999866 4556788888887 8988777543211100 0 011122 56888877776666542 799
Q ss_pred EEEE
Q 010065 150 LVVV 153 (519)
Q Consensus 150 ~Vi~ 153 (519)
.++.
T Consensus 86 ~lv~ 89 (248)
T 3op4_A 86 ILVN 89 (248)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 9997
No 393
>3asu_A Short-chain dehydrogenase/reductase SDR; SDR family, rossmann-fold, short-chain dehydrogenase/reducta ALLO-threonine dehydrogenase; 1.90A {Escherichia coli} PDB: 3asv_A*
Probab=50.11 E-value=9 Score=35.36 Aligned_cols=69 Identities=14% Similarity=0.228 Sum_probs=43.8
Q ss_pred cEEEEEeCC-hhHHHHHHHHHhcCCCcEEEEecCCCCCcCC-----CCCccccCCCCCCHHHHHHHHHHc-----CCcEE
Q 010065 83 VVVLVIGGG-GREHALCYALKRSHSCDAVFCAPGNAGISNS-----GDATCIPDLDVLDGDAVISFCRKW-----SVGLV 151 (519)
Q Consensus 83 ~~vliiG~g-~~~~~l~~~l~~~~g~~~v~~~~~~~~~~~~-----~~~~~v~~~d~~d~~~l~~~~~~~-----~id~V 151 (519)
|+++|+|++ +....++..|.+. |.+++.++.+....... .....+ ..|..|.+.+.+++++. ++|.+
T Consensus 1 k~vlVTGas~gIG~aia~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~-~~Dv~~~~~v~~~~~~~~~~~g~iD~l 78 (248)
T 3asu_A 1 MIVLVTGATAGFGECITRRFIQQ-GHKVIATGRRQERLQELKDELGDNLYIA-QLDVRNRAAIEEMLASLPAEWCNIDIL 78 (248)
T ss_dssp CEEEETTTTSTTHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHCTTEEEE-ECCTTCHHHHHHHHHTSCTTTCCCCEE
T ss_pred CEEEEECCCChHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHhcCceEEE-EcCCCCHHHHHHHHHHHHHhCCCCCEE
Confidence 467888865 4556788999887 88887765431110000 011223 57888888888877653 68999
Q ss_pred EE
Q 010065 152 VV 153 (519)
Q Consensus 152 i~ 153 (519)
+.
T Consensus 79 vn 80 (248)
T 3asu_A 79 VN 80 (248)
T ss_dssp EE
T ss_pred EE
Confidence 87
No 394
>1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ...
Probab=50.03 E-value=9.2 Score=36.03 Aligned_cols=70 Identities=17% Similarity=0.254 Sum_probs=42.5
Q ss_pred ccEEEEEeCC-hhHHHHHHHHHhcCCCcEEEEecCCCCCcCC---------CCCccccCCCCCCHHHHHHHHHH-----c
Q 010065 82 RVVVLVIGGG-GREHALCYALKRSHSCDAVFCAPGNAGISNS---------GDATCIPDLDVLDGDAVISFCRK-----W 146 (519)
Q Consensus 82 ~~~vliiG~g-~~~~~l~~~l~~~~g~~~v~~~~~~~~~~~~---------~~~~~v~~~d~~d~~~l~~~~~~-----~ 146 (519)
.++++|+|++ +....++..|.+. |++++.++.+....... .....+ ..|..|.+.+.+++++ .
T Consensus 28 ~k~vlITGasggIG~~la~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~-~~Dl~d~~~v~~~~~~~~~~~g 105 (286)
T 1xu9_A 28 GKKVIVTGASKGIGREMAYHLAKM-GAHVVVTARSKETLQKVVSHCLELGAASAHYI-AGTMEDMTFAEQFVAQAGKLMG 105 (286)
T ss_dssp TCEEEESSCSSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHHHTCSEEEEE-ECCTTCHHHHHHHHHHHHHHHT
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHC-CCEEEEEECCHHHHHHHHHHHHHhCCCceEEE-eCCCCCHHHHHHHHHHHHHHcC
Confidence 4689999975 4566788888877 88877765431110000 011122 4677777666665543 2
Q ss_pred CCcEEEE
Q 010065 147 SVGLVVV 153 (519)
Q Consensus 147 ~id~Vi~ 153 (519)
++|++|.
T Consensus 106 ~iD~li~ 112 (286)
T 1xu9_A 106 GLDMLIL 112 (286)
T ss_dssp SCSEEEE
T ss_pred CCCEEEE
Confidence 6898885
No 395
>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0
Probab=50.00 E-value=21 Score=32.49 Aligned_cols=72 Identities=15% Similarity=0.198 Sum_probs=41.5
Q ss_pred CccEEEEEeCC-hhHHHHHHHHHhcCCCcEEEEecCCCCCcC-------C--CCCcccc-CCCCCCHHHHHHHHHHc---
Q 010065 81 QRVVVLVIGGG-GREHALCYALKRSHSCDAVFCAPGNAGISN-------S--GDATCIP-DLDVLDGDAVISFCRKW--- 146 (519)
Q Consensus 81 ~~~~vliiG~g-~~~~~l~~~l~~~~g~~~v~~~~~~~~~~~-------~--~~~~~v~-~~d~~d~~~l~~~~~~~--- 146 (519)
+.++++|+|++ +....+++.|.+. |.++++++.+...... . .....+. .+|..+.+.+.++.++.
T Consensus 13 ~~k~vlITGas~gIG~~ia~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~d~d~~~~~~~~~~~~~~~~~ 91 (247)
T 3i1j_A 13 KGRVILVTGAARGIGAAAARAYAAH-GASVVLLGRTEASLAEVSDQIKSAGQPQPLIIALNLENATAQQYRELAARVEHE 91 (247)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHHTTSCCCEEEECCTTTCCHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHC-CCEEEEEecCHHHHHHHHHHHHhcCCCCceEEEeccccCCHHHHHHHHHHHHHh
Confidence 45789999976 4566788888877 8888777543110000 0 0111110 23446666665555432
Q ss_pred --CCcEEEE
Q 010065 147 --SVGLVVV 153 (519)
Q Consensus 147 --~id~Vi~ 153 (519)
++|+++.
T Consensus 92 ~g~id~lv~ 100 (247)
T 3i1j_A 92 FGRLDGLLH 100 (247)
T ss_dssp HSCCSEEEE
T ss_pred CCCCCEEEE
Confidence 7898887
No 396
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=49.98 E-value=14 Score=36.43 Aligned_cols=31 Identities=19% Similarity=0.268 Sum_probs=26.3
Q ss_pred cEEEEEeCChhHHHHHHHHHhcCCCcEEEEec
Q 010065 83 VVVLVIGGGGREHALCYALKRSHSCDAVFCAP 114 (519)
Q Consensus 83 ~~vliiG~g~~~~~l~~~l~~~~g~~~v~~~~ 114 (519)
|||+|+|+|.....++..|++. |+++++++.
T Consensus 2 m~V~IVGaGpaGl~~A~~L~~~-G~~v~v~Er 32 (412)
T 4hb9_A 2 MHVGIIGAGIGGTCLAHGLRKH-GIKVTIYER 32 (412)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-TCEEEEECS
T ss_pred CEEEEECcCHHHHHHHHHHHhC-CCCEEEEec
Confidence 7999999997777788899887 999888753
No 397
>3rsc_A CALG2; TDP, enediyne, structural genomics, PSI-2, protein structure initiative, center for eukaryotic structural genomics; HET: TYD C0T; 2.19A {Micromonospora echinospora} PDB: 3iaa_A*
Probab=49.96 E-value=18 Score=35.71 Aligned_cols=32 Identities=9% Similarity=0.163 Sum_probs=23.3
Q ss_pred ccEEEEEeCChhH-----HHHHHHHHhcCCCcEEEEec
Q 010065 82 RVVVLVIGGGGRE-----HALCYALKRSHSCDAVFCAP 114 (519)
Q Consensus 82 ~~~vliiG~g~~~-----~~l~~~l~~~~g~~~v~~~~ 114 (519)
+++|+++..++.. .++++.|++. |+++.++.+
T Consensus 20 m~rIl~~~~~~~GHv~p~l~La~~L~~~-Gh~V~v~~~ 56 (415)
T 3rsc_A 20 MAHLLIVNVASHGLILPTLTVVTELVRR-GHRVSYVTA 56 (415)
T ss_dssp CCEEEEECCSCHHHHGGGHHHHHHHHHT-TCEEEEEEC
T ss_pred CCEEEEEeCCCccccccHHHHHHHHHHC-CCEEEEEeC
Confidence 5678887665432 6788999877 898888763
No 398
>3cxt_A Dehydrogenase with different specificities; rossman fold, oxidoreductase; HET: NAP GKR; 1.90A {Streptococcus suis} PDB: 3cxr_A* 3o03_A*
Probab=49.86 E-value=22 Score=33.55 Aligned_cols=70 Identities=20% Similarity=0.245 Sum_probs=43.1
Q ss_pred ccEEEEEeCC-hhHHHHHHHHHhcCCCcEEEEecCCCCCcC--------CCCCccccCCCCCCHHHHHHHHHH-----cC
Q 010065 82 RVVVLVIGGG-GREHALCYALKRSHSCDAVFCAPGNAGISN--------SGDATCIPDLDVLDGDAVISFCRK-----WS 147 (519)
Q Consensus 82 ~~~vliiG~g-~~~~~l~~~l~~~~g~~~v~~~~~~~~~~~--------~~~~~~v~~~d~~d~~~l~~~~~~-----~~ 147 (519)
.++++|+|++ +....++..|.+. |.++++++.+...... -.....+ ..|..|.+.+.+++++ .+
T Consensus 34 ~k~vlVTGas~gIG~aia~~L~~~-G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~-~~Dv~d~~~v~~~~~~~~~~~g~ 111 (291)
T 3cxt_A 34 GKIALVTGASYGIGFAIASAYAKA-GATIVFNDINQELVDRGMAAYKAAGINAHGY-VCDVTDEDGIQAMVAQIESEVGI 111 (291)
T ss_dssp TCEEEEETCSSHHHHHHHHHHHHT-TCEEEEEESSHHHHHHHHHHHHHTTCCCEEE-ECCTTCHHHHHHHHHHHHHHTCC
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHHHhcCCeEEEE-EecCCCHHHHHHHHHHHHHHcCC
Confidence 4689999966 4556788888877 8888776533110000 0011223 5688887776666554 25
Q ss_pred CcEEEE
Q 010065 148 VGLVVV 153 (519)
Q Consensus 148 id~Vi~ 153 (519)
+|++|.
T Consensus 112 iD~lvn 117 (291)
T 3cxt_A 112 IDILVN 117 (291)
T ss_dssp CCEEEE
T ss_pred CcEEEE
Confidence 899887
No 399
>1oi7_A Succinyl-COA synthetase alpha chain; SCS, ligase, riken structural genomics/proteomics initiative, RSGI, structural genomics; 1.23A {Thermus thermophilus} SCOP: c.2.1.8 c.23.4.1
Probab=49.67 E-value=1.4e+02 Score=28.03 Aligned_cols=84 Identities=21% Similarity=0.201 Sum_probs=46.9
Q ss_pred CCccEEEEEeCCh-hHHHHHHHHHhcCCCcEE-EEecCCCCCcCCCCCccccCCCCCCHHHHHHHHHHcCCcEEEECCCh
Q 010065 80 GQRVVVLVIGGGG-REHALCYALKRSHSCDAV-FCAPGNAGISNSGDATCIPDLDVLDGDAVISFCRKWSVGLVVVGPEA 157 (519)
Q Consensus 80 ~~~~~vliiG~g~-~~~~l~~~l~~~~g~~~v-~~~~~~~~~~~~~~~~~v~~~d~~d~~~l~~~~~~~~id~Vi~g~E~ 157 (519)
.+.++|.|+|..+ ..+.+++.+.+. |++.+ .++|...+.. ... ..+ ..+ +.++.++.++|+++...-.
T Consensus 5 ~~~~~VaVvGasG~~G~~~~~~l~~~-g~~~v~~VnP~~~g~~-i~G-~~v----y~s---l~el~~~~~~Dv~Ii~vp~ 74 (288)
T 1oi7_A 5 NRETRVLVQGITGREGQFHTKQMLTY-GTKIVAGVTPGKGGME-VLG-VPV----YDT---VKEAVAHHEVDASIIFVPA 74 (288)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHH-TCEEEEEECTTCTTCE-ETT-EEE----ESS---HHHHHHHSCCSEEEECCCH
T ss_pred CCCCEEEEECCCCCHHHHHHHHHHHc-CCeEEEEECCCCCCce-ECC-EEe----eCC---HHHHhhcCCCCEEEEecCH
Confidence 3457899999843 345566677666 88744 2334321111 000 001 122 3334445689999885444
Q ss_pred hhHHHHHHHHHHCCCC
Q 010065 158 PLVSGLANKLVKAGIP 173 (519)
Q Consensus 158 ~~~~~~a~~le~~gip 173 (519)
.....+.+.+-+.|++
T Consensus 75 ~~~~~~~~ea~~~Gi~ 90 (288)
T 1oi7_A 75 PAAADAALEAAHAGIP 90 (288)
T ss_dssp HHHHHHHHHHHHTTCS
T ss_pred HHHHHHHHHHHHCCCC
Confidence 4444666667778998
No 400
>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium}
Probab=49.58 E-value=60 Score=30.53 Aligned_cols=33 Identities=18% Similarity=0.335 Sum_probs=25.3
Q ss_pred CccEEEEEeCC-hhHHHHHHHHHhcCCCcEEEEec
Q 010065 81 QRVVVLVIGGG-GREHALCYALKRSHSCDAVFCAP 114 (519)
Q Consensus 81 ~~~~vliiG~g-~~~~~l~~~l~~~~g~~~v~~~~ 114 (519)
+.++++|+|++ +....++..|.+. |.++++++.
T Consensus 27 ~gk~~lVTGas~GIG~aia~~la~~-G~~V~~~~~ 60 (299)
T 3t7c_A 27 EGKVAFITGAARGQGRSHAITLARE-GADIIAIDV 60 (299)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHT-TCEEEEEEC
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHC-CCEEEEEec
Confidence 35789999976 4566788888887 998887754
No 401
>1qsg_A Enoyl-[acyl-carrier-protein] reductase; enoyl reductase, oxidoreductase; HET: GLC NAD TCL; 1.75A {Escherichia coli} SCOP: c.2.1.2 PDB: 1c14_A* 1i2z_A* 1i30_A* 1lx6_A* 1lxc_A* 1mfp_A* 2fhs_A 1qg6_A* 1dfg_A* 1dfh_A* 1d8a_A* 1dfi_A* 3pje_A* 3pjd_A* 3pjf_A*
Probab=49.54 E-value=32 Score=31.68 Aligned_cols=70 Identities=14% Similarity=0.175 Sum_probs=43.2
Q ss_pred ccEEEEEeCC---hhHHHHHHHHHhcCCCcEEEEecCCCCCcC-------CCCCccccCCCCCCHHHHHHHHHHc-----
Q 010065 82 RVVVLVIGGG---GREHALCYALKRSHSCDAVFCAPGNAGISN-------SGDATCIPDLDVLDGDAVISFCRKW----- 146 (519)
Q Consensus 82 ~~~vliiG~g---~~~~~l~~~l~~~~g~~~v~~~~~~~~~~~-------~~~~~~v~~~d~~d~~~l~~~~~~~----- 146 (519)
.++++|+|++ +....++..|.+. |++++.++.+...... ......+ ..|..|.+.+.+++++.
T Consensus 9 ~k~vlVTGas~~~gIG~~ia~~l~~~-G~~V~~~~r~~~~~~~~~~l~~~~~~~~~~-~~D~~~~~~v~~~~~~~~~~~g 86 (265)
T 1qsg_A 9 GKRILVTGVASKLSIAYGIAQAMHRE-GAELAFTYQNDKLKGRVEEFAAQLGSDIVL-QCDVAEDASIDTMFAELGKVWP 86 (265)
T ss_dssp TCEEEECCCCSTTSHHHHHHHHHHHT-TCEEEEEESSTTTHHHHHHHHHHTTCCCEE-ECCTTCHHHHHHHHHHHHTTCS
T ss_pred CCEEEEECCCCCCCHHHHHHHHHHHC-CCEEEEEcCcHHHHHHHHHHHHhcCCcEEE-EccCCCHHHHHHHHHHHHHHcC
Confidence 4689999974 5667789999887 8888776543210000 0011122 46777777776666543
Q ss_pred CCcEEEE
Q 010065 147 SVGLVVV 153 (519)
Q Consensus 147 ~id~Vi~ 153 (519)
++|+++.
T Consensus 87 ~iD~lv~ 93 (265)
T 1qsg_A 87 KFDGFVH 93 (265)
T ss_dssp SEEEEEE
T ss_pred CCCEEEE
Confidence 6788886
No 402
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=49.50 E-value=11 Score=39.06 Aligned_cols=35 Identities=14% Similarity=0.293 Sum_probs=28.1
Q ss_pred CccEEEEEeCChhHHHHHHHHHhcCCCcEEEEecCC
Q 010065 81 QRVVVLVIGGGGREHALCYALKRSHSCDAVFCAPGN 116 (519)
Q Consensus 81 ~~~~vliiG~g~~~~~l~~~l~~~~g~~~v~~~~~~ 116 (519)
+|.+|+|||+|......++.|++. +++++++++++
T Consensus 41 ~KprVVIIGgG~AGl~~A~~L~~~-~~~VtLId~~~ 75 (502)
T 4g6h_A 41 DKPNVLILGSGWGAISFLKHIDTK-KYNVSIISPRS 75 (502)
T ss_dssp SSCEEEEECSSHHHHHHHHHSCTT-TCEEEEEESSS
T ss_pred CCCCEEEECCcHHHHHHHHHhhhC-CCcEEEECCCC
Confidence 578999999997666677887765 89999998764
No 403
>3q2i_A Dehydrogenase; rossmann fold, UDP-sugar binding, NAD binding oxidoreductase; HET: NAD HP7; 1.50A {Chromobacterium violaceum} PDB: 3q2k_A*
Probab=49.33 E-value=13 Score=36.44 Aligned_cols=116 Identities=11% Similarity=0.063 Sum_probs=60.2
Q ss_pred CccEEEEEeCChhHHHHHHHHHhc-CCCcEEEEecCCCCCcCCCCCccccCC-CCCCHHHHHHHHHHcCCcEEEECCChh
Q 010065 81 QRVVVLVIGGGGREHALCYALKRS-HSCDAVFCAPGNAGISNSGDATCIPDL-DVLDGDAVISFCRKWSVGLVVVGPEAP 158 (519)
Q Consensus 81 ~~~~vliiG~g~~~~~l~~~l~~~-~g~~~v~~~~~~~~~~~~~~~~~v~~~-d~~d~~~l~~~~~~~~id~Vi~g~E~~ 158 (519)
++++|.|||.|......+..+.+. .+++.+.+.+.++..... ..... .+ -..+.+++ +...++|+|+...-..
T Consensus 12 ~~~rvgiiG~G~~g~~~~~~l~~~~~~~~lvav~d~~~~~~~~-~~~~~-~~~~~~~~~~l---l~~~~~D~V~i~tp~~ 86 (354)
T 3q2i_A 12 RKIRFALVGCGRIANNHFGALEKHADRAELIDVCDIDPAALKA-AVERT-GARGHASLTDM---LAQTDADIVILTTPSG 86 (354)
T ss_dssp SCEEEEEECCSTTHHHHHHHHHHTTTTEEEEEEECSSHHHHHH-HHHHH-CCEEESCHHHH---HHHCCCSEEEECSCGG
T ss_pred CcceEEEEcCcHHHHHHHHHHHhCCCCeEEEEEEcCCHHHHHH-HHHHc-CCceeCCHHHH---hcCCCCCEEEECCCcH
Confidence 468999999996555566777766 577766553322211000 00001 11 12344444 4557899999864444
Q ss_pred hHHHHHHHHHHCCCCeeCCcHHHHHHhcCHHHHHHHHHHcCCCC
Q 010065 159 LVSGLANKLVKAGIPTFGPSSEAAALEGSKNFMKNLCDKYGIPT 202 (519)
Q Consensus 159 ~~~~~a~~le~~gip~~g~~~~~~~~~~dK~~~k~~l~~~Gi~~ 202 (519)
.-..++..+-+.|.+++.-.+-+.... +=..+.+++++.|+..
T Consensus 87 ~h~~~~~~al~~gk~v~~EKP~a~~~~-~~~~l~~~a~~~g~~~ 129 (354)
T 3q2i_A 87 LHPTQSIECSEAGFHVMTEKPMATRWE-DGLEMVKAADKAKKHL 129 (354)
T ss_dssp GHHHHHHHHHHTTCEEEECSSSCSSHH-HHHHHHHHHHHHTCCE
T ss_pred HHHHHHHHHHHCCCCEEEeCCCcCCHH-HHHHHHHHHHHhCCeE
Confidence 433444445567887764333221111 1123445566667654
No 404
>3u9l_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.10A {Sinorhizobium meliloti}
Probab=49.29 E-value=33 Score=32.96 Aligned_cols=70 Identities=16% Similarity=0.187 Sum_probs=42.5
Q ss_pred ccEEEEEeCC-hhHHHHHHHHHhcCCCcEEEEecCCCCCc-----C--------CCCCccccCCCCCCHHHHHHHHHHc-
Q 010065 82 RVVVLVIGGG-GREHALCYALKRSHSCDAVFCAPGNAGIS-----N--------SGDATCIPDLDVLDGDAVISFCRKW- 146 (519)
Q Consensus 82 ~~~vliiG~g-~~~~~l~~~l~~~~g~~~v~~~~~~~~~~-----~--------~~~~~~v~~~d~~d~~~l~~~~~~~- 146 (519)
.++++|+|++ +....+++.|.+. |++++....+..+.. . ......+ ..|..|.+.+.+++++.
T Consensus 5 ~k~vlVTGas~GIG~aia~~L~~~-G~~V~~~~r~~~~r~~~~~~~l~~~~~~~~~~~~~~-~~Dvtd~~~v~~~~~~~~ 82 (324)
T 3u9l_A 5 KKIILITGASSGFGRLTAEALAGA-GHRVYASMRDIVGRNASNVEAIAGFARDNDVDLRTL-ELDVQSQVSVDRAIDQII 82 (324)
T ss_dssp CCEEEESSCSSHHHHHHHHHHHHT-TCEEEEEESCTTTTTHHHHHHHHHHHHHHTCCEEEE-ECCTTCHHHHHHHHHHHH
T ss_pred CCEEEEECCCcHHHHHHHHHHHHC-CCEEEEecCcccccCHHHHHHHHHHHHhcCCcEEEE-EeecCCHHHHHHHHHHHH
Confidence 4678999865 4567788999887 888776543211100 0 0011222 56777777666666543
Q ss_pred ----CCcEEEE
Q 010065 147 ----SVGLVVV 153 (519)
Q Consensus 147 ----~id~Vi~ 153 (519)
++|+++.
T Consensus 83 ~~~g~iD~lVn 93 (324)
T 3u9l_A 83 GEDGRIDVLIH 93 (324)
T ss_dssp HHHSCCSEEEE
T ss_pred HHcCCCCEEEE
Confidence 7888887
No 405
>2p91_A Enoyl-[acyl-carrier-protein] reductase [NADH]; NADH-dependent enoyl-ACP reductase, FABI, aquifex A VF5, structural genomics, PSI; 2.00A {Aquifex aeolicus}
Probab=49.24 E-value=21 Score=33.50 Aligned_cols=70 Identities=13% Similarity=0.167 Sum_probs=43.5
Q ss_pred ccEEEEEeCC---hhHHHHHHHHHhcCCCcEEEEecCCCC---CcC----CCCCccccCCCCCCHHHHHHHHHHc-----
Q 010065 82 RVVVLVIGGG---GREHALCYALKRSHSCDAVFCAPGNAG---ISN----SGDATCIPDLDVLDGDAVISFCRKW----- 146 (519)
Q Consensus 82 ~~~vliiG~g---~~~~~l~~~l~~~~g~~~v~~~~~~~~---~~~----~~~~~~v~~~d~~d~~~l~~~~~~~----- 146 (519)
.++++|+|++ +....++..|.+. |.+++.++.+... ... ......+ ..|..|.+.+.+++++.
T Consensus 21 ~k~vlVTGas~~~gIG~~ia~~l~~~-G~~V~~~~r~~~~~~~~~~l~~~~~~~~~~-~~Dl~~~~~v~~~~~~~~~~~g 98 (285)
T 2p91_A 21 GKRALITGVANERSIAYGIAKSFHRE-GAQLAFTYATPKLEKRVREIAKGFGSDLVV-KCDVSLDEDIKNLKKFLEENWG 98 (285)
T ss_dssp TCEEEECCCSSTTSHHHHHHHHHHHT-TCEEEEEESSGGGHHHHHHHHHHTTCCCEE-ECCTTCHHHHHHHHHHHHHHTS
T ss_pred CCEEEEECCCCCCcHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHHHhcCCeEEE-EcCCCCHHHHHHHHHHHHHHcC
Confidence 4689999974 5667789999887 8888776543210 000 0011222 56777777766665542
Q ss_pred CCcEEEE
Q 010065 147 SVGLVVV 153 (519)
Q Consensus 147 ~id~Vi~ 153 (519)
++|++|.
T Consensus 99 ~iD~lv~ 105 (285)
T 2p91_A 99 SLDIIVH 105 (285)
T ss_dssp CCCEEEE
T ss_pred CCCEEEE
Confidence 6898887
No 406
>3f4l_A Putative oxidoreductase YHHX; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.00A {Escherichia coli k-12}
Probab=49.01 E-value=13 Score=36.15 Aligned_cols=143 Identities=20% Similarity=0.159 Sum_probs=70.0
Q ss_pred ccEEEEEeCChhHHH-HHH-HHHhcCCCcEEEEecCCCCCcCCCCCccccCC-CCCCHHHHHHHHHHcCCcEEEECCChh
Q 010065 82 RVVVLVIGGGGREHA-LCY-ALKRSHSCDAVFCAPGNAGISNSGDATCIPDL-DVLDGDAVISFCRKWSVGLVVVGPEAP 158 (519)
Q Consensus 82 ~~~vliiG~g~~~~~-l~~-~l~~~~g~~~v~~~~~~~~~~~~~~~~~v~~~-d~~d~~~l~~~~~~~~id~Vi~g~E~~ 158 (519)
+++|.|||.|..... .+. .+....+++++.+.+.++...... ...... -..+.+++ +...++|+|+...-..
T Consensus 2 ~~rvgiiG~G~~g~~~~~~~~~~~~~~~~l~av~d~~~~~~~~~--~~~~~~~~~~~~~~l---l~~~~~D~V~i~tp~~ 76 (345)
T 3f4l_A 2 VINCAFIGFGKSTTRYHLPYVLNRKDSWHVAHIFRRHAKPEEQA--PIYSHIHFTSDLDEV---LNDPDVKLVVVCTHAD 76 (345)
T ss_dssp CEEEEEECCSHHHHHHTHHHHTTCTTTEEEEEEECSSCCGGGGS--GGGTTCEEESCTHHH---HTCTTEEEEEECSCGG
T ss_pred ceEEEEEecCHHHHHHHHHHHHhcCCCeEEEEEEcCCHhHHHHH--HhcCCCceECCHHHH---hcCCCCCEEEEcCChH
Confidence 478999999964322 223 223344777775543333221111 111001 12344444 3445799999865444
Q ss_pred hHHHHHHHHHHCCCCeeCCcHHHHHHhcCHHHHHHHHHHcCCCCCCeee--cC-CHHHHHHHHH--HhCCCEEEEeC
Q 010065 159 LVSGLANKLVKAGIPTFGPSSEAAALEGSKNFMKNLCDKYGIPTAKYKT--FT-DPNAAKQYIQ--EEGAPIVVKAD 230 (519)
Q Consensus 159 ~~~~~a~~le~~gip~~g~~~~~~~~~~dK~~~k~~l~~~Gi~~p~~~~--v~-~~~~~~~~~~--~~g~P~VvKP~ 230 (519)
.-..++..+-+.|.+++.-.|-+... .+=..+.+.+++.|+..--... .. ....+.+.++ .+|-+..+.-.
T Consensus 77 ~h~~~~~~al~aGk~Vl~EKP~a~~~-~e~~~l~~~a~~~g~~~~v~~~~r~~p~~~~~~~~i~~g~iG~i~~~~~~ 152 (345)
T 3f4l_A 77 SHFEYAKRALEAGKNVLVEKPFTPTL-AQAKELFALAKSKGLTVTPYQNRRFDSCFLTAKKAIESGKLGEIVEVESH 152 (345)
T ss_dssp GHHHHHHHHHHTTCEEEECSSSCSSH-HHHHHHHHHHHHHTCCEEECCGGGGCHHHHHHHHHHHHSTTCSEEEEEEE
T ss_pred HHHHHHHHHHHcCCcEEEeCCCCCCH-HHHHHHHHHHHHcCCeEEEEechhcCHHHHHHHHHHhcCCCCCeEEEEEE
Confidence 43345555667798887433322211 1112345667777875421111 11 2234555554 46666665543
No 407
>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti}
Probab=49.00 E-value=25 Score=32.99 Aligned_cols=70 Identities=21% Similarity=0.229 Sum_probs=40.5
Q ss_pred ccEEEEEeCC-hhHHHHHHHHHhcCCCcEEEEecCCCCC-c----C----CCCCccccCCCCCCHHHHHHHHHH-----c
Q 010065 82 RVVVLVIGGG-GREHALCYALKRSHSCDAVFCAPGNAGI-S----N----SGDATCIPDLDVLDGDAVISFCRK-----W 146 (519)
Q Consensus 82 ~~~vliiG~g-~~~~~l~~~l~~~~g~~~v~~~~~~~~~-~----~----~~~~~~v~~~d~~d~~~l~~~~~~-----~ 146 (519)
.++++|+|++ +....++..|.+. |.++++++..+... . . -.....+ ..|..|.+.+.+++++ -
T Consensus 29 ~k~~lVTGas~GIG~aia~~la~~-G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~Dv~d~~~v~~~~~~~~~~~g 106 (280)
T 4da9_A 29 RPVAIVTGGRRGIGLGIARALAAS-GFDIAITGIGDAEGVAPVIAELSGLGARVIFL-RADLADLSSHQATVDAVVAEFG 106 (280)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHT-TCEEEEEESCCHHHHHHHHHHHHHTTCCEEEE-ECCTTSGGGHHHHHHHHHHHHS
T ss_pred CCEEEEecCCCHHHHHHHHHHHHC-CCeEEEEeCCCHHHHHHHHHHHHhcCCcEEEE-EecCCCHHHHHHHHHHHHHHcC
Confidence 5678999876 4556788888877 89887775322110 0 0 0011122 4566665444444432 2
Q ss_pred CCcEEEE
Q 010065 147 SVGLVVV 153 (519)
Q Consensus 147 ~id~Vi~ 153 (519)
++|++|.
T Consensus 107 ~iD~lvn 113 (280)
T 4da9_A 107 RIDCLVN 113 (280)
T ss_dssp CCCEEEE
T ss_pred CCCEEEE
Confidence 7898886
No 408
>2nu8_A Succinyl-COA ligase [ADP-forming] subunit alpha; citric acid cycle, heterotetramer, ligase, ATP-grAsp fold, R fold; HET: COA; 2.15A {Escherichia coli} SCOP: c.2.1.8 c.23.4.1 PDB: 2nu9_A* 2nu7_A* 2nua_A* 2nu6_A* 2scu_A* 1jll_A* 1scu_A* 1jkj_A* 1cqj_A* 1cqi_A*
Probab=48.96 E-value=1.5e+02 Score=27.80 Aligned_cols=85 Identities=15% Similarity=0.119 Sum_probs=47.0
Q ss_pred CCccEEEEEeC-ChhHHHHHHHHHhcCCCcEEE-EecCCCCCcCCCCCccccCCCCCCHHHHHHHHHHcCCcEEEECCCh
Q 010065 80 GQRVVVLVIGG-GGREHALCYALKRSHSCDAVF-CAPGNAGISNSGDATCIPDLDVLDGDAVISFCRKWSVGLVVVGPEA 157 (519)
Q Consensus 80 ~~~~~vliiG~-g~~~~~l~~~l~~~~g~~~v~-~~~~~~~~~~~~~~~~v~~~d~~d~~~l~~~~~~~~id~Vi~g~E~ 157 (519)
.++.+|.|+|. |...+..++.+.+. |++.+. ++|...+.. . .-+ .+ ..+.+++ .++.++|+++...-.
T Consensus 5 ~~~~rVaViG~sG~~G~~~~~~l~~~-g~~~V~~V~p~~~g~~-~---~G~-~v-y~sl~el---~~~~~~D~viI~tP~ 74 (288)
T 2nu8_A 5 DKNTKVICQGFTGSQGTFHSEQAIAY-GTKMVGGVTPGKGGTT-H---LGL-PV-FNTVREA---VAATGATASVIYVPA 74 (288)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHH-TCEEEEEECTTCTTCE-E---TTE-EE-ESSHHHH---HHHHCCCEEEECCCG
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHC-CCeEEEEeCCCcccce-e---CCe-ec-cCCHHHH---hhcCCCCEEEEecCH
Confidence 35689999998 64444556666665 777442 334311111 0 001 00 1233433 444589999885444
Q ss_pred hhHHHHHHHHHHCCCCe
Q 010065 158 PLVSGLANKLVKAGIPT 174 (519)
Q Consensus 158 ~~~~~~a~~le~~gip~ 174 (519)
.....+.+.+-+.|++.
T Consensus 75 ~~~~~~~~ea~~~Gi~~ 91 (288)
T 2nu8_A 75 PFCKDSILEAIDAGIKL 91 (288)
T ss_dssp GGHHHHHHHHHHTTCSE
T ss_pred HHHHHHHHHHHHCCCCE
Confidence 44445666677789985
No 409
>1a9x_B Carbamoyl phosphate synthetase (small chain); amidotransferase, thioester; HET: CYG ADP; 1.80A {Escherichia coli} SCOP: c.8.3.1 c.23.16.1 PDB: 1bxr_B* 1ce8_B* 1jdb_C* 1cs0_B* 1m6v_B* 1c30_B* 1c3o_B* 1kee_B* 1t36_B*
Probab=48.92 E-value=4.7 Score=40.23 Aligned_cols=21 Identities=29% Similarity=0.422 Sum_probs=18.8
Q ss_pred CCceeccCCceeEEeccCCCc
Q 010065 33 NNLRFSVGPNFSISFNPQGSK 53 (519)
Q Consensus 33 ~~~~~~~~~~~~~~~~~~~~~ 53 (519)
++++|...|.|+|||||+...
T Consensus 337 eai~~~~~pi~gVQFHPE~~~ 357 (379)
T 1a9x_B 337 QGIHRTDKPAFSFQGNPEASP 357 (379)
T ss_dssp EEEEESSSSEEEESSCTTCSS
T ss_pred EEEEECCCCEEEEEeCCcCCC
Confidence 688998999999999999864
No 410
>2x9g_A PTR1, pteridine reductase; short chain dehydrogenase, oxidoreductase; HET: NAP LYA; 1.10A {Trypanosoma brucei brucei} PDB: 2x9n_A* 2x9v_A* 3bmc_A* 3bmd_A* 3bme_A* 3bmf_A* 3bmg_A* 3bmh_A* 3bmi_A* 3bmj_A* 3bmk_A* 3bml_A* 3bmm_A* 3bmn_A* 3bmo_A* 3bmq_A* 3bmr_A* 3gn1_A* 3gn2_A* 3jq6_A* ...
Probab=48.89 E-value=20 Score=33.65 Aligned_cols=70 Identities=13% Similarity=0.132 Sum_probs=42.1
Q ss_pred ccEEEEEeCC-hhHHHHHHHHHhcCCCcEEEEecCC-CCCc--------C-CCCCccccCCCCCC----HHHHHHHHHH-
Q 010065 82 RVVVLVIGGG-GREHALCYALKRSHSCDAVFCAPGN-AGIS--------N-SGDATCIPDLDVLD----GDAVISFCRK- 145 (519)
Q Consensus 82 ~~~vliiG~g-~~~~~l~~~l~~~~g~~~v~~~~~~-~~~~--------~-~~~~~~v~~~d~~d----~~~l~~~~~~- 145 (519)
.++++|+|++ +....+++.|.+. |.++++++.+. .... . -.....+ ..|..| .+.+.+++++
T Consensus 23 ~k~~lVTGas~gIG~aia~~L~~~-G~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~-~~Dv~~~~~~~~~v~~~~~~~ 100 (288)
T 2x9g_A 23 APAAVVTGAAKRIGRAIAVKLHQT-GYRVVIHYHNSAEAAVSLADELNKERSNTAVVC-QADLTNSNVLPASCEEIINSC 100 (288)
T ss_dssp CCEEEETTCSSHHHHHHHHHHHHH-TCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEE-ECCCSCSTTHHHHHHHHHHHH
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHC-CCeEEEEeCCchHHHHHHHHHHHhhcCCceEEE-EeecCCccCCHHHHHHHHHHH
Confidence 4678898866 4556788888887 88887765432 1100 0 0011122 467777 6666665543
Q ss_pred ----cCCcEEEE
Q 010065 146 ----WSVGLVVV 153 (519)
Q Consensus 146 ----~~id~Vi~ 153 (519)
.++|++|.
T Consensus 101 ~~~~g~iD~lvn 112 (288)
T 2x9g_A 101 FRAFGRCDVLVN 112 (288)
T ss_dssp HHHHSCCCEEEE
T ss_pred HHhcCCCCEEEE
Confidence 26898887
No 411
>3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 3uic_A* 2jjy_A*
Probab=48.88 E-value=28 Score=32.54 Aligned_cols=70 Identities=14% Similarity=0.216 Sum_probs=43.7
Q ss_pred ccEEEEEeCC---hhHHHHHHHHHhcCCCcEEEEecCCCC--C----cCCCCCccccCCCCCCHHHHHHHHHHc-----C
Q 010065 82 RVVVLVIGGG---GREHALCYALKRSHSCDAVFCAPGNAG--I----SNSGDATCIPDLDVLDGDAVISFCRKW-----S 147 (519)
Q Consensus 82 ~~~vliiG~g---~~~~~l~~~l~~~~g~~~v~~~~~~~~--~----~~~~~~~~v~~~d~~d~~~l~~~~~~~-----~ 147 (519)
.++++|+|++ |....+++.|.+. |.++++++.+... . ........+ ..|..+.+.+.+++++. +
T Consensus 26 ~k~vlVTGasg~~GIG~~ia~~l~~~-G~~V~~~~r~~~~~~~~~l~~~~~~~~~~-~~Dl~~~~~v~~~~~~~~~~~g~ 103 (280)
T 3nrc_A 26 GKKILITGLLSNKSIAYGIAKAMHRE-GAELAFTYVGQFKDRVEKLCAEFNPAAVL-PCDVISDQEIKDLFVELGKVWDG 103 (280)
T ss_dssp TCEEEECCCCSTTCHHHHHHHHHHHT-TCEEEEEECTTCHHHHHHHHGGGCCSEEE-ECCTTCHHHHHHHHHHHHHHCSS
T ss_pred CCEEEEECCCCCCCHHHHHHHHHHHc-CCEEEEeeCchHHHHHHHHHHhcCCceEE-EeecCCHHHHHHHHHHHHHHcCC
Confidence 4678888843 3566788998887 8887776543300 0 000111223 57888877777666543 6
Q ss_pred CcEEEE
Q 010065 148 VGLVVV 153 (519)
Q Consensus 148 id~Vi~ 153 (519)
+|+++.
T Consensus 104 id~li~ 109 (280)
T 3nrc_A 104 LDAIVH 109 (280)
T ss_dssp CCEEEE
T ss_pred CCEEEE
Confidence 899987
No 412
>1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A*
Probab=48.80 E-value=13 Score=34.24 Aligned_cols=70 Identities=16% Similarity=0.268 Sum_probs=42.9
Q ss_pred ccEEEEEeCC-hhHHHHHHHHHhcCCCcEEEEecCCCC-CcC--------CCCCccccCCCCCCHHHHHHHHHHc-----
Q 010065 82 RVVVLVIGGG-GREHALCYALKRSHSCDAVFCAPGNAG-ISN--------SGDATCIPDLDVLDGDAVISFCRKW----- 146 (519)
Q Consensus 82 ~~~vliiG~g-~~~~~l~~~l~~~~g~~~v~~~~~~~~-~~~--------~~~~~~v~~~d~~d~~~l~~~~~~~----- 146 (519)
.++++|+|++ +....++..|.+. |++++.++..+.. ... ......+ ..|..|.+.+.+++++.
T Consensus 7 ~k~vlITGasggiG~~~a~~l~~~-G~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~-~~D~~~~~~~~~~~~~~~~~~g 84 (261)
T 1gee_A 7 GKVVVITGSSTGLGKSMAIRFATE-KAKVVVNYRSKEDEANSVLEEIKKVGGEAIAV-KGDVTVESDVINLVQSAIKEFG 84 (261)
T ss_dssp TCEEEETTCSSHHHHHHHHHHHHT-TCEEEEEESSCHHHHHHHHHHHHHTTCEEEEE-ECCTTSHHHHHHHHHHHHHHHS
T ss_pred CCEEEEeCCCChHHHHHHHHHHHC-CCEEEEEcCCChHHHHHHHHHHHhcCCceEEE-ECCCCCHHHHHHHHHHHHHHcC
Confidence 4689999866 4556788888877 8887776541211 000 0011122 46778877776665542
Q ss_pred CCcEEEE
Q 010065 147 SVGLVVV 153 (519)
Q Consensus 147 ~id~Vi~ 153 (519)
++|++|.
T Consensus 85 ~id~li~ 91 (261)
T 1gee_A 85 KLDVMIN 91 (261)
T ss_dssp CCCEEEE
T ss_pred CCCEEEE
Confidence 7999987
No 413
>2nwq_A Probable short-chain dehydrogenase; oxidoreductase; 2.30A {Pseudomonas aeruginosa}
Probab=48.30 E-value=9.9 Score=35.72 Aligned_cols=69 Identities=13% Similarity=0.151 Sum_probs=43.5
Q ss_pred cEEEEEeCC-hhHHHHHHHHHhcCCCcEEEEecCCCCCcC----C---CCCccccCCCCCCHHHHHHHHHHc-----CCc
Q 010065 83 VVVLVIGGG-GREHALCYALKRSHSCDAVFCAPGNAGISN----S---GDATCIPDLDVLDGDAVISFCRKW-----SVG 149 (519)
Q Consensus 83 ~~vliiG~g-~~~~~l~~~l~~~~g~~~v~~~~~~~~~~~----~---~~~~~v~~~d~~d~~~l~~~~~~~-----~id 149 (519)
++++|+|++ +....++..|.+. |+++++++.+...... . .....+ ..|..|.+.+.+++++. ++|
T Consensus 22 k~vlVTGas~gIG~aia~~La~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~-~~Dv~d~~~v~~~~~~~~~~~g~iD 99 (272)
T 2nwq_A 22 STLFITGATSGFGEACARRFAEA-GWSLVLTGRREERLQALAGELSAKTRVLPL-TLDVRDRAAMSAAVDNLPEEFATLR 99 (272)
T ss_dssp CEEEESSTTTSSHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHTTTSCEEEE-ECCTTCHHHHHHHHHTCCGGGSSCC
T ss_pred cEEEEeCCCCHHHHHHHHHHHHC-CCEEEEEECCHHHHHHHHHHhhcCCcEEEE-EcCCCCHHHHHHHHHHHHHHhCCCC
Confidence 567788765 3456788888887 8888776543111000 0 011223 57888888888877653 589
Q ss_pred EEEE
Q 010065 150 LVVV 153 (519)
Q Consensus 150 ~Vi~ 153 (519)
+++.
T Consensus 100 ~lvn 103 (272)
T 2nwq_A 100 GLIN 103 (272)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 9887
No 414
>4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A
Probab=47.97 E-value=36 Score=31.34 Aligned_cols=71 Identities=14% Similarity=0.140 Sum_probs=42.7
Q ss_pred CccEEEEEeCC---hhHHHHHHHHHhcCCCcEEEEecCCCCCc-------CC--CCCccccCCCCCCHHHHHHHHHH---
Q 010065 81 QRVVVLVIGGG---GREHALCYALKRSHSCDAVFCAPGNAGIS-------NS--GDATCIPDLDVLDGDAVISFCRK--- 145 (519)
Q Consensus 81 ~~~~vliiG~g---~~~~~l~~~l~~~~g~~~v~~~~~~~~~~-------~~--~~~~~v~~~d~~d~~~l~~~~~~--- 145 (519)
+.|.++|.|++ |...++++.|.++ |.++++.+.+..... .. .....+ ..|..+.+++.+++++
T Consensus 5 ~gK~alVTGaa~~~GIG~aiA~~la~~-Ga~Vvi~~r~~~~~~~~~~~~~~~~~~~~~~~-~~Dv~~~~~v~~~~~~~~~ 82 (256)
T 4fs3_A 5 ENKTYVIMGIANKRSIAFGVAKVLDQL-GAKLVFTYRKERSRKELEKLLEQLNQPEAHLY-QIDVQSDEEVINGFEQIGK 82 (256)
T ss_dssp TTCEEEEECCCSTTCHHHHHHHHHHHT-TCEEEEEESSGGGHHHHHHHHGGGTCSSCEEE-ECCTTCHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCCCchHHHHHHHHHHHC-CCEEEEEECCHHHHHHHHHHHHhcCCCcEEEE-EccCCCHHHHHHHHHHHHH
Confidence 45789999953 4567789999888 998887754321110 00 011222 4677776665555432
Q ss_pred --cCCcEEEE
Q 010065 146 --WSVGLVVV 153 (519)
Q Consensus 146 --~~id~Vi~ 153 (519)
-++|.++.
T Consensus 83 ~~G~iD~lvn 92 (256)
T 4fs3_A 83 DVGNIDGVYH 92 (256)
T ss_dssp HHCCCSEEEE
T ss_pred HhCCCCEEEe
Confidence 26888876
No 415
>1xgk_A Nitrogen metabolite repression regulator NMRA; rossmann fold, transcriptional regulation, short chain dehyd reductase, NADP binding; 1.40A {Emericella nidulans} SCOP: c.2.1.2 PDB: 1k6x_A* 1k6j_A 1k6i_A* 1ti7_A* 2vus_A 2vut_A* 2vuu_A*
Probab=47.45 E-value=38 Score=32.92 Aligned_cols=68 Identities=10% Similarity=0.100 Sum_probs=42.9
Q ss_pred ccEEEEEeCCh-hHHHHHHHHHhcCCCcEEEEecCCCCC--cCC---CCCccccCCC-CCCHHHHHHHHHHcCCcEEEE
Q 010065 82 RVVVLVIGGGG-REHALCYALKRSHSCDAVFCAPGNAGI--SNS---GDATCIPDLD-VLDGDAVISFCRKWSVGLVVV 153 (519)
Q Consensus 82 ~~~vliiG~g~-~~~~l~~~l~~~~g~~~v~~~~~~~~~--~~~---~~~~~v~~~d-~~d~~~l~~~~~~~~id~Vi~ 153 (519)
+++|+|+|+.| ....++..|.+. |++++.+..+.... ... .....+ ..| ..|.+.+.+.++ ++|.||.
T Consensus 5 ~~~ilVtGatG~iG~~l~~~L~~~-g~~V~~~~R~~~~~~~~~l~~~~~v~~v-~~D~l~d~~~l~~~~~--~~d~Vi~ 79 (352)
T 1xgk_A 5 KKTIAVVGATGRQGASLIRVAAAV-GHHVRAQVHSLKGLIAEELQAIPNVTLF-QGPLLNNVPLMDTLFE--GAHLAFI 79 (352)
T ss_dssp CCCEEEESTTSHHHHHHHHHHHHT-TCCEEEEESCSCSHHHHHHHTSTTEEEE-ESCCTTCHHHHHHHHT--TCSEEEE
T ss_pred CCEEEEECCCCHHHHHHHHHHHhC-CCEEEEEECCCChhhHHHHhhcCCcEEE-ECCccCCHHHHHHHHh--cCCEEEE
Confidence 47899999754 556788888776 88887775432211 000 011222 468 778888777664 5898885
No 416
>2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix}
Probab=47.44 E-value=23 Score=32.64 Aligned_cols=71 Identities=15% Similarity=0.234 Sum_probs=43.2
Q ss_pred CccEEEEEeCC-hhHHHHHHHHHhcCCCcEEEEecCCCCCcC----C-----C-CCccccCCCCCCHHHHHHHHHH----
Q 010065 81 QRVVVLVIGGG-GREHALCYALKRSHSCDAVFCAPGNAGISN----S-----G-DATCIPDLDVLDGDAVISFCRK---- 145 (519)
Q Consensus 81 ~~~~vliiG~g-~~~~~l~~~l~~~~g~~~v~~~~~~~~~~~----~-----~-~~~~v~~~d~~d~~~l~~~~~~---- 145 (519)
+.++++|+|++ +....++..|.+. |.+++.++.+...... . . ....+ ..|..|.+.+.+++++
T Consensus 6 ~~k~vlVTGas~gIG~~ia~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~-~~D~~~~~~v~~~~~~~~~~ 83 (260)
T 2z1n_A 6 QGKLAVVTAGSSGLGFASALELARN-GARLLLFSRNREKLEAAASRIASLVSGAQVDIV-AGDIREPGDIDRLFEKARDL 83 (260)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHHHSTTCCEEEE-ECCTTCHHHHHHHHHHHHHT
T ss_pred CCCEEEEECCCchHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHHHhcCCCCeEEEE-EccCCCHHHHHHHHHHHHHh
Confidence 34689999976 4556788888887 8888776543110000 0 0 11222 5687887766665543
Q ss_pred cCCcEEEE
Q 010065 146 WSVGLVVV 153 (519)
Q Consensus 146 ~~id~Vi~ 153 (519)
.++|++|.
T Consensus 84 ~gid~lv~ 91 (260)
T 2z1n_A 84 GGADILVY 91 (260)
T ss_dssp TCCSEEEE
T ss_pred cCCCEEEE
Confidence 24899887
No 417
>3gdo_A Uncharacterized oxidoreductase YVAA; structural genomics, putative oxidoreductase YVAA, oxidoredu PSI-2, protein structure initiative; 2.03A {Bacillus subtilis subsp} PDB: 3gfg_A
Probab=47.44 E-value=9.2 Score=37.57 Aligned_cols=141 Identities=14% Similarity=0.078 Sum_probs=69.2
Q ss_pred CccEEEEEeCChhHHH-HHHHHHhcCCCcEEEEecCCCCCcCCCCCcccc-CCCCCCHHHHHHHHHHcCCcEEEECCChh
Q 010065 81 QRVVVLVIGGGGREHA-LCYALKRSHSCDAVFCAPGNAGISNSGDATCIP-DLDVLDGDAVISFCRKWSVGLVVVGPEAP 158 (519)
Q Consensus 81 ~~~~vliiG~g~~~~~-l~~~l~~~~g~~~v~~~~~~~~~~~~~~~~~v~-~~d~~d~~~l~~~~~~~~id~Vi~g~E~~ 158 (519)
++++|.|||.|..... .+..+++..+++++.+.+.++.. .. ..+. ..-..|.+++ +...++|+|+...-..
T Consensus 4 ~~~rvgiiG~G~~g~~~~~~~l~~~~~~~l~av~d~~~~~--~~--~~~~~~~~~~~~~~l---l~~~~vD~V~i~tp~~ 76 (358)
T 3gdo_A 4 DTIKVGILGYGLSGSVFHGPLLDVLDEYQISKIMTSRTEE--VK--RDFPDAEVVHELEEI---TNDPAIELVIVTTPSG 76 (358)
T ss_dssp TCEEEEEECCSHHHHHTTHHHHTTCTTEEEEEEECSCHHH--HH--HHCTTSEEESSTHHH---HTCTTCCEEEECSCTT
T ss_pred CcceEEEEccCHHHHHHHHHHHhhCCCeEEEEEEcCCHHH--HH--hhCCCCceECCHHHH---hcCCCCCEEEEcCCcH
Confidence 4579999999964432 34455555577776554333211 00 0000 0011334444 4456799999854333
Q ss_pred hHHHHHHHHHHCCCCeeCCcHHHHHHhcCHHHHHHHHHHcCCCCCCeee--cC-CHHHHHHHHH--HhCCCEEEEe
Q 010065 159 LVSGLANKLVKAGIPTFGPSSEAAALEGSKNFMKNLCDKYGIPTAKYKT--FT-DPNAAKQYIQ--EEGAPIVVKA 229 (519)
Q Consensus 159 ~~~~~a~~le~~gip~~g~~~~~~~~~~dK~~~k~~l~~~Gi~~p~~~~--v~-~~~~~~~~~~--~~g~P~VvKP 229 (519)
.-..++..+-+.|.+++.-.|-+... .+=..+.+++++.|+..--... .. ....+.+.++ .+|-+..+.-
T Consensus 77 ~H~~~~~~al~aGkhVl~EKPla~~~-~e~~~l~~~a~~~g~~~~v~~~~r~~p~~~~~k~~i~~g~iG~i~~~~~ 151 (358)
T 3gdo_A 77 LHYEHTMACIQAGKHVVMEKPMTATA-EEGETLKRAADEKGVLLSVYHNRRWDNDFLTIKKLISEGSLEDINTYQV 151 (358)
T ss_dssp THHHHHHHHHHTTCEEEEESSCCSSH-HHHHHHHHHHHHHTCCEEEECGGGGSHHHHHHHHHHHTTSSCSCCEEEE
T ss_pred HHHHHHHHHHHcCCeEEEecCCcCCH-HHHHHHHHHHHHcCCeEEEeeecccCHHHHHHHHHHhcCCCCceEEEEE
Confidence 32344555667788776322221111 1112355667777775422111 11 1234555554 4565655544
No 418
>3ko8_A NAD-dependent epimerase/dehydratase; isomerase, UDP-galactose 4-epimerase; HET: NAD; 1.80A {Pyrobaculum calidifontis} SCOP: c.2.1.0 PDB: 3icp_A* 3aw9_A*
Probab=47.41 E-value=11 Score=35.69 Aligned_cols=65 Identities=17% Similarity=0.062 Sum_probs=37.6
Q ss_pred cEEEEEeCC-hhHHHHHHHHHhcCCCcEEEEecCCCCCcC-C-CCCccccCCCCCCHHHHHHHHHHcCCcEEEE
Q 010065 83 VVVLVIGGG-GREHALCYALKRSHSCDAVFCAPGNAGISN-S-GDATCIPDLDVLDGDAVISFCRKWSVGLVVV 153 (519)
Q Consensus 83 ~~vliiG~g-~~~~~l~~~l~~~~g~~~v~~~~~~~~~~~-~-~~~~~v~~~d~~d~~~l~~~~~~~~id~Vi~ 153 (519)
|+|||+|+. .....++..|.+. |++++.++........ . .....+ ..|..|.+ +.+.++ . |.||-
T Consensus 1 m~vlVtGatG~iG~~l~~~L~~~-g~~V~~~~r~~~~~~~~~~~~~~~~-~~Dl~d~~-~~~~~~--~-d~vih 68 (312)
T 3ko8_A 1 MRIVVTGGAGFIGSHLVDKLVEL-GYEVVVVDNLSSGRREFVNPSAELH-VRDLKDYS-WGAGIK--G-DVVFH 68 (312)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHT-TCEEEEECCCSSCCGGGSCTTSEEE-CCCTTSTT-TTTTCC--C-SEEEE
T ss_pred CEEEEECCCChHHHHHHHHHHhC-CCEEEEEeCCCCCchhhcCCCceEE-ECccccHH-HHhhcC--C-CEEEE
Confidence 589999985 4566788888877 8888777543221111 1 111222 45666654 433332 2 88886
No 419
>1zuw_A Glutamate racemase 1; (R)-glutamate, peptidoglycan biosynthesi isomerase; HET: DGL; 1.75A {Bacillus subtilis}
Probab=47.35 E-value=59 Score=30.41 Aligned_cols=95 Identities=12% Similarity=0.126 Sum_probs=48.2
Q ss_pred cEEEEEeCChhHHHHHHHHHhc-CCCcEEEEecC-CCCCcCCCCCccccCCCCCCHHHHHHHHHH-cCCcEEEECCChhh
Q 010065 83 VVVLVIGGGGREHALCYALKRS-HSCDAVFCAPG-NAGISNSGDATCIPDLDVLDGDAVISFCRK-WSVGLVVVGPEAPL 159 (519)
Q Consensus 83 ~~vliiG~g~~~~~l~~~l~~~-~g~~~v~~~~~-~~~~~~~~~~~~v~~~d~~d~~~l~~~~~~-~~id~Vi~g~E~~~ 159 (519)
.+|.|+.+|--...+.+.+.+. ++.+.+++.+. +..... ...+.+. .-..+..+.+.+ .++|+|+..+-...
T Consensus 4 ~~IgvfDSGvGGltv~~~i~~~lP~~~~iy~~D~~~~PyG~-~s~~~i~----~~~~~~~~~L~~~~g~d~iViACNTas 78 (272)
T 1zuw_A 4 QPIGVIDSGVGGLTVAKEIMRQLPKENIIYVGDTKRCPYGP-RPEEEVL----QYTWELTNYLLENHHIKMLVIACNTAT 78 (272)
T ss_dssp SCEEEEESSSTTHHHHHHHHHHSTTCCEEEEECGGGCCCSS-SCHHHHH----HHHHHHHHHHHHHSCCSEEEECCHHHH
T ss_pred CeEEEEeCCcchHHHHHHHHHhCCCCcEEEeccCCCCCCCC-CCHHHHH----HHHHHHHHHHHhhcCCCEEEEeCchhh
Confidence 4689987763333455666554 35556655332 111000 0001010 001233444556 78999999776654
Q ss_pred HHHHHHHHHHCCCCeeCCcHHHH
Q 010065 160 VSGLANKLVKAGIPTFGPSSEAA 182 (519)
Q Consensus 160 ~~~~a~~le~~gip~~g~~~~~~ 182 (519)
...+...-+..++|++|.-..++
T Consensus 79 ~~~l~~lr~~~~iPVigiiepa~ 101 (272)
T 1zuw_A 79 AIALDDIQRSVGIPVVGVIQPGA 101 (272)
T ss_dssp HHHHHHHHHHCSSCEEESHHHHH
T ss_pred HHHHHHHHHHCCCCEEcccHHHH
Confidence 22333444578999998543333
No 420
>1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A*
Probab=47.20 E-value=24 Score=33.03 Aligned_cols=70 Identities=20% Similarity=0.385 Sum_probs=42.3
Q ss_pred ccEEEEEeCC-hhHHHHHHHHHhcCCCcEEEEecCCCC-CcC--------CCCCccccCCCCCCHHHHHHHHHH-----c
Q 010065 82 RVVVLVIGGG-GREHALCYALKRSHSCDAVFCAPGNAG-ISN--------SGDATCIPDLDVLDGDAVISFCRK-----W 146 (519)
Q Consensus 82 ~~~vliiG~g-~~~~~l~~~l~~~~g~~~v~~~~~~~~-~~~--------~~~~~~v~~~d~~d~~~l~~~~~~-----~ 146 (519)
.++++|+|++ +....++..|.+. |.+++.++.+... ... -.....+ ..|..|.+.+.+++++ .
T Consensus 29 ~k~vlVTGas~gIG~~ia~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~-~~D~~~~~~~~~~~~~~~~~~g 106 (283)
T 1g0o_A 29 GKVALVTGAGRGIGREMAMELGRR-GCKVIVNYANSTESAEEVVAAIKKNGSDAACV-KANVGVVEDIVRMFEEAVKIFG 106 (283)
T ss_dssp TCEEEETTTTSHHHHHHHHHHHHT-TCEEEEEESSCHHHHHHHHHHHHHTTCCEEEE-ECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHC-CCEEEEEeCCchHHHHHHHHHHHHhCCCeEEE-EcCCCCHHHHHHHHHHHHHHcC
Confidence 4678888866 3556788888887 8888776543211 000 0011222 4677777666655543 2
Q ss_pred CCcEEEE
Q 010065 147 SVGLVVV 153 (519)
Q Consensus 147 ~id~Vi~ 153 (519)
++|+++.
T Consensus 107 ~iD~lv~ 113 (283)
T 1g0o_A 107 KLDIVCS 113 (283)
T ss_dssp CCCEEEE
T ss_pred CCCEEEE
Confidence 6898887
No 421
>3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} SCOP: c.2.1.0
Probab=47.11 E-value=26 Score=32.77 Aligned_cols=70 Identities=19% Similarity=0.308 Sum_probs=43.0
Q ss_pred CccEEEEEeCC-hhHHHHHHHHHhcCCCcEEEEecCCCCCcC-------C-CCCccccCCCCCCHHHHHHHHHH----cC
Q 010065 81 QRVVVLVIGGG-GREHALCYALKRSHSCDAVFCAPGNAGISN-------S-GDATCIPDLDVLDGDAVISFCRK----WS 147 (519)
Q Consensus 81 ~~~~vliiG~g-~~~~~l~~~l~~~~g~~~v~~~~~~~~~~~-------~-~~~~~v~~~d~~d~~~l~~~~~~----~~ 147 (519)
+.++++|+|++ +....++..|.+. |.+++.++.. ..... . .....+ ..|..|.+.+.++.+. .+
T Consensus 30 ~gk~~lVTGas~GIG~aia~~la~~-G~~V~~~~r~-~~~~~~~~~~~~~~~~~~~~-~~Dv~d~~~v~~~~~~~~~~g~ 106 (273)
T 3uf0_A 30 AGRTAVVTGAGSGIGRAIAHGYARA-GAHVLAWGRT-DGVKEVADEIADGGGSAEAV-VADLADLEGAANVAEELAATRR 106 (273)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHT-TCEEEEEESS-THHHHHHHHHHTTTCEEEEE-ECCTTCHHHHHHHHHHHHHHSC
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHC-CCEEEEEcCH-HHHHHHHHHHHhcCCcEEEE-EecCCCHHHHHHHHHHHHhcCC
Confidence 35789999976 4556788898877 8988777622 11100 0 011122 4677887766655332 37
Q ss_pred CcEEEE
Q 010065 148 VGLVVV 153 (519)
Q Consensus 148 id~Vi~ 153 (519)
+|+++.
T Consensus 107 iD~lv~ 112 (273)
T 3uf0_A 107 VDVLVN 112 (273)
T ss_dssp CCEEEE
T ss_pred CcEEEE
Confidence 999887
No 422
>3ezy_A Dehydrogenase; structural genomics, unknown function, PSI-2, protein structure initiative; 2.04A {Thermotoga maritima}
Probab=46.91 E-value=8.9 Score=37.37 Aligned_cols=142 Identities=15% Similarity=0.029 Sum_probs=71.2
Q ss_pred ccEEEEEeCChhHHHHHHHHHhcCCCcEEEEecCCCCCcCCCCCccccCC--CCCCHHHHHHHHHHcCCcEEEECCChhh
Q 010065 82 RVVVLVIGGGGREHALCYALKRSHSCDAVFCAPGNAGISNSGDATCIPDL--DVLDGDAVISFCRKWSVGLVVVGPEAPL 159 (519)
Q Consensus 82 ~~~vliiG~g~~~~~l~~~l~~~~g~~~v~~~~~~~~~~~~~~~~~v~~~--d~~d~~~l~~~~~~~~id~Vi~g~E~~~ 159 (519)
+++|.|||.|......+..+.+..+++.+.+.+.++..... ..... .+ -..+.+++ +...++|+|+...-...
T Consensus 2 ~~rvgiIG~G~~g~~~~~~l~~~~~~~l~av~d~~~~~~~~-~~~~~-~~~~~~~~~~~l---l~~~~~D~V~i~tp~~~ 76 (344)
T 3ezy_A 2 SLRIGVIGLGRIGTIHAENLKMIDDAILYAISDVREDRLRE-MKEKL-GVEKAYKDPHEL---IEDPNVDAVLVCSSTNT 76 (344)
T ss_dssp CEEEEEECCSHHHHHHHHHGGGSTTEEEEEEECSCHHHHHH-HHHHH-TCSEEESSHHHH---HHCTTCCEEEECSCGGG
T ss_pred eeEEEEEcCCHHHHHHHHHHHhCCCcEEEEEECCCHHHHHH-HHHHh-CCCceeCCHHHH---hcCCCCCEEEEcCCCcc
Confidence 46899999997555567777766577776553322211000 00111 11 12344444 44567999998654444
Q ss_pred HHHHHHHHHHCCCCeeCCcHHHHHHhcCHHHHHHHHHHcCCCCCCeeec---CCHHHHHHHHH--HhCCCEEEEe
Q 010065 160 VSGLANKLVKAGIPTFGPSSEAAALEGSKNFMKNLCDKYGIPTAKYKTF---TDPNAAKQYIQ--EEGAPIVVKA 229 (519)
Q Consensus 160 ~~~~a~~le~~gip~~g~~~~~~~~~~dK~~~k~~l~~~Gi~~p~~~~v---~~~~~~~~~~~--~~g~P~VvKP 229 (519)
-..++..+-+.|.+++.-.+-+... .+=..+.+++++.|+..--.... .....+.+.++ .+|-+..+.-
T Consensus 77 h~~~~~~al~~gk~v~~EKP~~~~~-~e~~~l~~~a~~~g~~~~v~~~~R~~p~~~~~k~~i~~G~iG~i~~~~~ 150 (344)
T 3ezy_A 77 HSELVIACAKAKKHVFCEKPLSLNL-ADVDRMIEETKKADVILFTGFNRRFDRNFKKLKEAVENGTIGKPHVLRI 150 (344)
T ss_dssp HHHHHHHHHHTTCEEEEESCSCSCH-HHHHHHHHHHHHHTCCEEEECGGGGCHHHHHHHHHHHTTTTSSEEEEEE
T ss_pred hHHHHHHHHhcCCeEEEECCCCCCH-HHHHHHHHHHHHhCCcEEEeecccCCHHHHHHHHHHHcCCCCCeEEEEE
Confidence 3344555566788776322211111 01123455677777654221111 12234555554 3666666654
No 423
>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp}
Probab=46.85 E-value=28 Score=32.83 Aligned_cols=71 Identities=20% Similarity=0.204 Sum_probs=43.1
Q ss_pred CccEEEEEeCC-hhHHHHHHHHHhcCCCcEEEEecCCC-C-CcC--------CCCCccccCCCCCCHHHHHHHHHH----
Q 010065 81 QRVVVLVIGGG-GREHALCYALKRSHSCDAVFCAPGNA-G-ISN--------SGDATCIPDLDVLDGDAVISFCRK---- 145 (519)
Q Consensus 81 ~~~~vliiG~g-~~~~~l~~~l~~~~g~~~v~~~~~~~-~-~~~--------~~~~~~v~~~d~~d~~~l~~~~~~---- 145 (519)
+.++++|+|++ +....+++.|.+. |.++++++.... . ... -.....+ ..|..|.+.+.+++++
T Consensus 48 ~~k~vlVTGas~GIG~aia~~la~~-G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~Dv~d~~~v~~~~~~~~~~ 125 (294)
T 3r3s_A 48 KDRKALVTGGDSGIGRAAAIAYARE-GADVAINYLPAEEEDAQQVKALIEECGRKAVLL-PGDLSDESFARSLVHKAREA 125 (294)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHT-TCEEEEECCGGGHHHHHHHHHHHHHTTCCEEEC-CCCTTSHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHC-CCEEEEEeCCcchhHHHHHHHHHHHcCCcEEEE-EecCCCHHHHHHHHHHHHHH
Confidence 45789999976 4556788888887 888877643211 0 000 0011222 5677777666655543
Q ss_pred -cCCcEEEE
Q 010065 146 -WSVGLVVV 153 (519)
Q Consensus 146 -~~id~Vi~ 153 (519)
.++|+++.
T Consensus 126 ~g~iD~lv~ 134 (294)
T 3r3s_A 126 LGGLDILAL 134 (294)
T ss_dssp HTCCCEEEE
T ss_pred cCCCCEEEE
Confidence 26898887
No 424
>4gkb_A 3-oxoacyl-[acyl-carrier protein] reductase; putative sugar dehydrogenase, enzyme function initiative, EF structural genomics; 1.50A {Burkholderia multivorans} PDB: 4glo_A*
Probab=46.63 E-value=62 Score=30.00 Aligned_cols=71 Identities=21% Similarity=0.178 Sum_probs=43.6
Q ss_pred CccEEEEEeCC-hhHHHHHHHHHhcCCCcEEEEecCCCCCcC-------CCCCccccCCCCCCHHHHHHHHHH-----cC
Q 010065 81 QRVVVLVIGGG-GREHALCYALKRSHSCDAVFCAPGNAGISN-------SGDATCIPDLDVLDGDAVISFCRK-----WS 147 (519)
Q Consensus 81 ~~~~vliiG~g-~~~~~l~~~l~~~~g~~~v~~~~~~~~~~~-------~~~~~~v~~~d~~d~~~l~~~~~~-----~~ 147 (519)
+.|.++|.|++ |...+++..|.++ |..+++++.+...... ......+ ..|..|.+.+.+++++ -+
T Consensus 6 ~gKvalVTGas~GIG~aia~~la~~-Ga~Vv~~~r~~~~~~~~~~~~~~~~~~~~~-~~Dv~~~~~v~~~v~~~~~~~G~ 83 (258)
T 4gkb_A 6 QDKVVIVTGGASGIGGAISMRLAEE-RAIPVVFARHAPDGAFLDALAQRQPRATYL-PVELQDDAQCRDAVAQTIATFGR 83 (258)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHT-TCEEEEEESSCCCHHHHHHHHHHCTTCEEE-ECCTTCHHHHHHHHHHHHHHHSC
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHc-CCEEEEEECCcccHHHHHHHHhcCCCEEEE-EeecCCHHHHHHHHHHHHHHhCC
Confidence 45788888876 4556788899887 8888877644322110 0112223 5677776665554433 26
Q ss_pred CcEEEE
Q 010065 148 VGLVVV 153 (519)
Q Consensus 148 id~Vi~ 153 (519)
+|.++.
T Consensus 84 iDiLVN 89 (258)
T 4gkb_A 84 LDGLVN 89 (258)
T ss_dssp CCEEEE
T ss_pred CCEEEE
Confidence 898887
No 425
>2x5o_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; ATP-binding, cell cycle, cell division, cell shape, cell WAL biogenesis/degradation; HET: KCX VSV; 1.46A {Escherichia coli} PDB: 2wjp_A* 2xpc_A* 2y1o_A* 2jff_A* 2jfh_A* 2uuo_A* 2uup_A* 2vtd_A* 2vte_A* 2jfg_A* 2y66_A* 2y67_A* 2y68_A* 4uag_A* 1e0d_A* 1uag_A* 1eeh_A* 3uag_A* 2uag_A*
Probab=46.49 E-value=1.3e+02 Score=30.13 Aligned_cols=34 Identities=15% Similarity=0.021 Sum_probs=26.7
Q ss_pred CccEEEEEeCChhHHHHHHHHHhcCCCcEEEEecC
Q 010065 81 QRVVVLVIGGGGREHALCYALKRSHSCDAVFCAPG 115 (519)
Q Consensus 81 ~~~~vliiG~g~~~~~l~~~l~~~~g~~~v~~~~~ 115 (519)
..++|+|+|.|+.....++.|++. |+++...|..
T Consensus 4 ~~~~v~viG~G~~G~~~a~~l~~~-G~~v~~~D~~ 37 (439)
T 2x5o_A 4 QGKNVVIIGLGLTGLSCVDFFLAR-GVTPRVMDTR 37 (439)
T ss_dssp TTCCEEEECCHHHHHHHHHHHHTT-TCCCEEEESS
T ss_pred CCCEEEEEeecHHHHHHHHHHHhC-CCEEEEEECC
Confidence 357899999997776678777766 9998887754
No 426
>4fb5_A Probable oxidoreductase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, GFO/IDH/MOCA family; 2.61A {Rhizobium etli}
Probab=46.46 E-value=19 Score=35.38 Aligned_cols=142 Identities=18% Similarity=0.129 Sum_probs=69.4
Q ss_pred ccEEEEEeCChhHHHHHHHHHh-------cCCCcEEEEecCCCCCcCCCCCccccCC--CCCCHHHHHHHHHHcCCcEEE
Q 010065 82 RVVVLVIGGGGREHALCYALKR-------SHSCDAVFCAPGNAGISNSGDATCIPDL--DVLDGDAVISFCRKWSVGLVV 152 (519)
Q Consensus 82 ~~~vliiG~g~~~~~l~~~l~~-------~~g~~~v~~~~~~~~~~~~~~~~~v~~~--d~~d~~~l~~~~~~~~id~Vi 152 (519)
+.+|.|||.|.....-+..++. ..+.+++.+.+.+...... ....+ .+ -..|.+++ +...++|+|+
T Consensus 25 kirvgiIG~G~ig~~H~~a~~~~~~~~~~~~~~~lvav~d~~~~~a~~-~a~~~-g~~~~y~d~~el---l~~~~iDaV~ 99 (393)
T 4fb5_A 25 PLGIGLIGTGYMGKCHALAWNAVKTVFGDVERPRLVHLAEANAGLAEA-RAGEF-GFEKATADWRAL---IADPEVDVVS 99 (393)
T ss_dssp CCEEEEECCSHHHHHHHHHHTTHHHHHCSSCCCEEEEEECC--TTHHH-HHHHH-TCSEEESCHHHH---HHCTTCCEEE
T ss_pred CccEEEEcCCHHHHHHHHHHHhhhhhhccCCCcEEEEEECCCHHHHHH-HHHHh-CCCeecCCHHHH---hcCCCCcEEE
Confidence 4689999999533211222221 2356666665433322110 00111 11 12455555 4466899999
Q ss_pred ECCChhhHHHHHHHHHHCCCCeeCCcHHHHHHhcCHHHHHHHHHHcCCCCCCee-ecCC--HHHHHHHHH--HhCCCEEE
Q 010065 153 VGPEAPLVSGLANKLVKAGIPTFGPSSEAAALEGSKNFMKNLCDKYGIPTAKYK-TFTD--PNAAKQYIQ--EEGAPIVV 227 (519)
Q Consensus 153 ~g~E~~~~~~~a~~le~~gip~~g~~~~~~~~~~dK~~~k~~l~~~Gi~~p~~~-~v~~--~~~~~~~~~--~~g~P~Vv 227 (519)
...-...=..++..+-+.|.+++.-.|-+... .+=..+.+++++.|+..--.. .-.+ ...+.+.++ .+|-+..+
T Consensus 100 IatP~~~H~~~a~~al~aGkhVl~EKPla~~~-~ea~~l~~~a~~~g~~l~vg~~~R~~p~~~~~k~~i~~G~iG~i~~v 178 (393)
T 4fb5_A 100 VTTPNQFHAEMAIAALEAGKHVWCEKPMAPAY-ADAERMLATAERSGKVAALGYNYIQNPVMRHIRKLVGDGVIGRVNHV 178 (393)
T ss_dssp ECSCGGGHHHHHHHHHHTTCEEEECSCSCSSH-HHHHHHHHHHHHSSSCEEECCGGGGCHHHHHHHHHHHTTTTCSEEEE
T ss_pred ECCChHHHHHHHHHHHhcCCeEEEccCCcccH-HHHHHhhhhHHhcCCccccccccccChHHHHHHHHHHcCCCccccce
Confidence 86544443344555566798776444433322 222345567788887542211 1112 234555554 36666655
Q ss_pred Ee
Q 010065 228 KA 229 (519)
Q Consensus 228 KP 229 (519)
.-
T Consensus 179 ~~ 180 (393)
T 4fb5_A 179 RV 180 (393)
T ss_dssp EE
T ss_pred ee
Confidence 53
No 427
>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0
Probab=46.34 E-value=12 Score=35.44 Aligned_cols=33 Identities=24% Similarity=0.440 Sum_probs=24.5
Q ss_pred CccEEEEEeCC-hhHHHHHHHHHhcCCCcEEEEec
Q 010065 81 QRVVVLVIGGG-GREHALCYALKRSHSCDAVFCAP 114 (519)
Q Consensus 81 ~~~~vliiG~g-~~~~~l~~~l~~~~g~~~v~~~~ 114 (519)
..++++|+|++ +....+++.|.+. |.++++++.
T Consensus 11 ~~k~vlITGas~GIG~~~a~~L~~~-G~~V~~~~r 44 (311)
T 3o26_A 11 KRRCAVVTGGNKGIGFEICKQLSSN-GIMVVLTCR 44 (311)
T ss_dssp -CCEEEESSCSSHHHHHHHHHHHHT-TCEEEEEES
T ss_pred CCcEEEEecCCchHHHHHHHHHHHC-CCEEEEEeC
Confidence 45789999975 4567788888877 888877653
No 428
>2bd0_A Sepiapterin reductase; oxidoreductase; HET: NAP BIO; 1.70A {Chlorobium tepidum} SCOP: c.2.1.2
Probab=46.24 E-value=18 Score=32.84 Aligned_cols=70 Identities=19% Similarity=0.276 Sum_probs=41.6
Q ss_pred ccEEEEEeCC-hhHHHHHHHHHhcCCC-------cEEEEecCCCCCcC--------CCCCccccCCCCCCHHHHHHHHHH
Q 010065 82 RVVVLVIGGG-GREHALCYALKRSHSC-------DAVFCAPGNAGISN--------SGDATCIPDLDVLDGDAVISFCRK 145 (519)
Q Consensus 82 ~~~vliiG~g-~~~~~l~~~l~~~~g~-------~~v~~~~~~~~~~~--------~~~~~~v~~~d~~d~~~l~~~~~~ 145 (519)
.++++|+|++ +....++..|.+. |. +++.++.+...... ......+ ..|..|.+.+.+++++
T Consensus 2 ~k~vlITGasggiG~~la~~l~~~-G~~~~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~-~~D~~~~~~v~~~~~~ 79 (244)
T 2bd0_A 2 KHILLITGAGKGIGRAIALEFARA-ARHHPDFEPVLVLSSRTAADLEKISLECRAEGALTDTI-TADISDMADVRRLTTH 79 (244)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHHH-TTTCTTCCEEEEEEESCHHHHHHHHHHHHTTTCEEEEE-ECCTTSHHHHHHHHHH
T ss_pred CCEEEEECCCChHHHHHHHHHHHh-cCcccccceEEEEEeCCHHHHHHHHHHHHccCCeeeEE-EecCCCHHHHHHHHHH
Confidence 3679999966 4556788888877 77 66665432110000 0011122 5688887776666554
Q ss_pred -----cCCcEEEE
Q 010065 146 -----WSVGLVVV 153 (519)
Q Consensus 146 -----~~id~Vi~ 153 (519)
.++|++|.
T Consensus 80 ~~~~~g~id~li~ 92 (244)
T 2bd0_A 80 IVERYGHIDCLVN 92 (244)
T ss_dssp HHHHTSCCSEEEE
T ss_pred HHHhCCCCCEEEE
Confidence 26999987
No 429
>3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium}
Probab=46.14 E-value=18 Score=34.83 Aligned_cols=71 Identities=23% Similarity=0.286 Sum_probs=42.4
Q ss_pred CccEEEEEeCC-hhHHHHHHHHHhcCCCcEEEEecCC---------CC-CcC-------C-CCCccccCCCCCCHHHHHH
Q 010065 81 QRVVVLVIGGG-GREHALCYALKRSHSCDAVFCAPGN---------AG-ISN-------S-GDATCIPDLDVLDGDAVIS 141 (519)
Q Consensus 81 ~~~~vliiG~g-~~~~~l~~~l~~~~g~~~v~~~~~~---------~~-~~~-------~-~~~~~v~~~d~~d~~~l~~ 141 (519)
+.++++|+|++ +....++..|.+. |.++++++.+. .. ... . .....+ ..|..|.+.+.+
T Consensus 26 ~gk~vlVTGas~GIG~aia~~la~~-G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~Dv~d~~~v~~ 103 (322)
T 3qlj_A 26 DGRVVIVTGAGGGIGRAHALAFAAE-GARVVVNDIGVGLDGSPASGGSAAQSVVDEITAAGGEAVAD-GSNVADWDQAAG 103 (322)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHT-TCEEEEECCCBCTTSSBTCTTSHHHHHHHHHHHTTCEEEEE-CCCTTSHHHHHH
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHC-CCEEEEEeCcccccccccccHHHHHHHHHHHHhcCCcEEEE-ECCCCCHHHHHH
Confidence 35678898865 4566788888887 89888765320 00 000 0 001112 467777777666
Q ss_pred HHHHc-----CCcEEEE
Q 010065 142 FCRKW-----SVGLVVV 153 (519)
Q Consensus 142 ~~~~~-----~id~Vi~ 153 (519)
++++. ++|++|.
T Consensus 104 ~~~~~~~~~g~iD~lv~ 120 (322)
T 3qlj_A 104 LIQTAVETFGGLDVLVN 120 (322)
T ss_dssp HHHHHHHHHSCCCEEEC
T ss_pred HHHHHHHHcCCCCEEEE
Confidence 55542 7888886
No 430
>1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2
Probab=46.09 E-value=17 Score=33.65 Aligned_cols=71 Identities=18% Similarity=0.289 Sum_probs=41.6
Q ss_pred CccEEEEEeCC-hhHHHHHHHHHhcCCCcEEEEecCCCC-CcC--------CCCCccccCCCCCCHHHHHHHHHHc----
Q 010065 81 QRVVVLVIGGG-GREHALCYALKRSHSCDAVFCAPGNAG-ISN--------SGDATCIPDLDVLDGDAVISFCRKW---- 146 (519)
Q Consensus 81 ~~~~vliiG~g-~~~~~l~~~l~~~~g~~~v~~~~~~~~-~~~--------~~~~~~v~~~d~~d~~~l~~~~~~~---- 146 (519)
..++++|+|++ +....++..|.+. |++++.++..+.. ... ......+ ..|..|.+.+.+++++.
T Consensus 20 ~~k~vlItGasggiG~~la~~l~~~-G~~v~~~~r~~~~~~~~~~~~l~~~~~~~~~~-~~D~~~~~~~~~~~~~~~~~~ 97 (274)
T 1ja9_A 20 AGKVALTTGAGRGIGRGIAIELGRR-GASVVVNYGSSSKAAEEVVAELKKLGAQGVAI-QADISKPSEVVALFDKAVSHF 97 (274)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHT-TCEEEEEESSCHHHHHHHHHHHHHTTCCEEEE-ECCTTSHHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHC-CCEEEEEcCCchHHHHHHHHHHHhcCCcEEEE-EecCCCHHHHHHHHHHHHHHc
Confidence 34689999976 3456788888877 8887776542211 000 0011122 46777766666555432
Q ss_pred -CCcEEEE
Q 010065 147 -SVGLVVV 153 (519)
Q Consensus 147 -~id~Vi~ 153 (519)
++|+++.
T Consensus 98 ~~~d~vi~ 105 (274)
T 1ja9_A 98 GGLDFVMS 105 (274)
T ss_dssp SCEEEEEC
T ss_pred CCCCEEEE
Confidence 6787775
No 431
>1sby_A Alcohol dehydrogenase; ternary complex, NAD, trifluoroethanol, oxidoreductase; HET: NAD; 1.10A {Scaptodrosophila lebanonensis} SCOP: c.2.1.2 PDB: 1b14_A* 1b15_A* 1a4u_A* 1b2l_A* 1b16_A* 3rj5_A* 3rj9_A* 1mg5_A*
Probab=45.85 E-value=25 Score=32.22 Aligned_cols=70 Identities=13% Similarity=0.075 Sum_probs=40.4
Q ss_pred ccEEEEEeCC-hhHHHHHHHHHhcCCCc-EEEEecCCCC--CcC------CCCCccccCCCCCCH-HHHHHHHHH-----
Q 010065 82 RVVVLVIGGG-GREHALCYALKRSHSCD-AVFCAPGNAG--ISN------SGDATCIPDLDVLDG-DAVISFCRK----- 145 (519)
Q Consensus 82 ~~~vliiG~g-~~~~~l~~~l~~~~g~~-~v~~~~~~~~--~~~------~~~~~~v~~~d~~d~-~~l~~~~~~----- 145 (519)
.++++|+|++ +....++..|.+. |.+ ++.++.+... ... ......+ ..|..|. +.+.+++++
T Consensus 5 ~k~vlVtGas~gIG~~~a~~l~~~-G~~~v~~~~r~~~~~~~~~l~~~~~~~~~~~~-~~D~~~~~~~~~~~~~~~~~~~ 82 (254)
T 1sby_A 5 NKNVIFVAALGGIGLDTSRELVKR-NLKNFVILDRVENPTALAELKAINPKVNITFH-TYDVTVPVAESKKLLKKIFDQL 82 (254)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHT-CCSEEEEEESSCCHHHHHHHHHHCTTSEEEEE-ECCTTSCHHHHHHHHHHHHHHH
T ss_pred CcEEEEECCCChHHHHHHHHHHHC-CCcEEEEEecCchHHHHHHHHHhCCCceEEEE-EEecCCChHHHHHHHHHHHHhc
Confidence 4689999866 4556788888887 887 6655433210 000 0011122 4566665 555555443
Q ss_pred cCCcEEEE
Q 010065 146 WSVGLVVV 153 (519)
Q Consensus 146 ~~id~Vi~ 153 (519)
.++|++|.
T Consensus 83 g~id~lv~ 90 (254)
T 1sby_A 83 KTVDILIN 90 (254)
T ss_dssp SCCCEEEE
T ss_pred CCCCEEEE
Confidence 27898887
No 432
>3u3x_A Oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.79A {Sinorhizobium meliloti}
Probab=45.84 E-value=6.1 Score=39.02 Aligned_cols=142 Identities=10% Similarity=0.122 Sum_probs=69.2
Q ss_pred CccEEEEEeCChhH-HHHHHHHHhcCCCcEEEEecCCCCCcCCCCCcccc-CCCCCCHHHHHHHHHHcCCcEEEECCChh
Q 010065 81 QRVVVLVIGGGGRE-HALCYALKRSHSCDAVFCAPGNAGISNSGDATCIP-DLDVLDGDAVISFCRKWSVGLVVVGPEAP 158 (519)
Q Consensus 81 ~~~~vliiG~g~~~-~~l~~~l~~~~g~~~v~~~~~~~~~~~~~~~~~v~-~~d~~d~~~l~~~~~~~~id~Vi~g~E~~ 158 (519)
++++|.|||.|... ......+.. .+++++.+.+.++..... ....+. ..-..|.++++ ...++|+|+...-..
T Consensus 25 ~~irvgiiG~G~~~~~~~~~~~~~-~~~~lvav~d~~~~~a~~-~a~~~~~~~~~~~~~~ll---~~~~vD~V~I~tp~~ 99 (361)
T 3u3x_A 25 DELRFAAVGLNHNHIYGQVNCLLR-AGARLAGFHEKDDALAAE-FSAVYADARRIATAEEIL---EDENIGLIVSAAVSS 99 (361)
T ss_dssp -CCEEEEECCCSTTHHHHHHHHHH-TTCEEEEEECSCHHHHHH-HHHHSSSCCEESCHHHHH---TCTTCCEEEECCCHH
T ss_pred cCcEEEEECcCHHHHHHHHHHhhc-CCcEEEEEEcCCHHHHHH-HHHHcCCCcccCCHHHHh---cCCCCCEEEEeCChH
Confidence 45799999988533 233444443 488877664433211100 001110 01123555554 455799999865554
Q ss_pred hHHHHHHHHHHCCCCeeCCcHHHHHHhcCHHHHHHHHHHcCCCCCCee--ecCCH--HHHHHHHH--HhCCCEEEE
Q 010065 159 LVSGLANKLVKAGIPTFGPSSEAAALEGSKNFMKNLCDKYGIPTAKYK--TFTDP--NAAKQYIQ--EEGAPIVVK 228 (519)
Q Consensus 159 ~~~~~a~~le~~gip~~g~~~~~~~~~~dK~~~k~~l~~~Gi~~p~~~--~v~~~--~~~~~~~~--~~g~P~VvK 228 (519)
.-..++..+-+.|.+++.-.|-+... .+=..+.+++++.|+..--.. .+.++ ..+.+.++ .+|-+..+.
T Consensus 100 ~H~~~~~~al~aGkhVl~EKPla~~~-~ea~~l~~~a~~~g~~l~v~~~~R~~~p~~~~~k~~i~~g~iG~i~~~~ 174 (361)
T 3u3x_A 100 ERAELAIRAMQHGKDVLVDKPGMTSF-DQLAKLRRVQAETGRIFSILYSEHFESPATVKAGELVAAGAIGEVVHIV 174 (361)
T ss_dssp HHHHHHHHHHHTTCEEEEESCSCSSH-HHHHHHHHHHHTTCCCEEEECHHHHTCHHHHHHHHHHHTTTTSSEEEEE
T ss_pred HHHHHHHHHHHCCCeEEEeCCCCCCH-HHHHHHHHHHHHcCCEEEEechHhhCCHHHHHHHHHHHcCCCCCeEEEE
Confidence 43345555666788876433322211 111234456677776542211 11112 34555554 356565554
No 433
>3v5n_A Oxidoreductase; structural genomics, PSI-biology, protein structure initiati nysgrc, NEW YORK structural genomics research consortium; 2.80A {Sinorhizobium meliloti}
Probab=45.73 E-value=16 Score=36.75 Aligned_cols=146 Identities=15% Similarity=0.144 Sum_probs=69.3
Q ss_pred CccEEEEEeCCh---hHHHHHHHHHhcCCCcEEE-EecCCCCCcCCCCCccccCC----CCCCHHHHHHHHHH--cCCcE
Q 010065 81 QRVVVLVIGGGG---REHALCYALKRSHSCDAVF-CAPGNAGISNSGDATCIPDL----DVLDGDAVISFCRK--WSVGL 150 (519)
Q Consensus 81 ~~~~vliiG~g~---~~~~l~~~l~~~~g~~~v~-~~~~~~~~~~~~~~~~v~~~----d~~d~~~l~~~~~~--~~id~ 150 (519)
++++|.|||.|. ....-+..++...+++++. +.+.++..... ....+ .+ -..|.+++++-.+. .++|+
T Consensus 36 ~~~rvgiiG~G~~~~ig~~h~~~~~~~~~~~lva~v~d~~~~~a~~-~a~~~-g~~~~~~~~~~~~ll~~~~~~~~~vD~ 113 (417)
T 3v5n_A 36 KRIRLGMVGGGSGAFIGAVHRIAARLDDHYELVAGALSSTPEKAEA-SGREL-GLDPSRVYSDFKEMAIREAKLKNGIEA 113 (417)
T ss_dssp CCEEEEEESCC--CHHHHHHHHHHHHTSCEEEEEEECCSSHHHHHH-HHHHH-TCCGGGBCSCHHHHHHHHHHCTTCCSE
T ss_pred CcceEEEEcCCCchHHHHHHHHHHhhCCCcEEEEEEeCCCHHHHHH-HHHHc-CCCcccccCCHHHHHhcccccCCCCcE
Confidence 467999999995 3333344455454566653 42222211000 00011 11 23456666553221 46999
Q ss_pred EEECCChhhHHHHHHHHHHCCCCeeCCcHHHHHHhcCHHHHHHHHHHcCCCCCCeeec-C--CHHHHHHHHH--HhCCCE
Q 010065 151 VVVGPEAPLVSGLANKLVKAGIPTFGPSSEAAALEGSKNFMKNLCDKYGIPTAKYKTF-T--DPNAAKQYIQ--EEGAPI 225 (519)
Q Consensus 151 Vi~g~E~~~~~~~a~~le~~gip~~g~~~~~~~~~~dK~~~k~~l~~~Gi~~p~~~~v-~--~~~~~~~~~~--~~g~P~ 225 (519)
|+...-...-..++..+-+.|.+++.-.|-+... .+=..+.+++++.|+..--.... . ....+.+.++ .+|-+.
T Consensus 114 V~I~tp~~~H~~~~~~al~aGkhVl~EKPla~~~-~ea~~l~~~a~~~g~~~~v~~~~R~~p~~~~~k~~i~~G~iG~i~ 192 (417)
T 3v5n_A 114 VAIVTPNHVHYAAAKEFLKRGIHVICDKPLTSTL-ADAKKLKKAADESDALFVLTHNYTGYPMVRQAREMIENGDIGAVR 192 (417)
T ss_dssp EEECSCTTSHHHHHHHHHTTTCEEEEESSSCSSH-HHHHHHHHHHHHCSSCEEEECGGGGSHHHHHHHHHHHTTTTCSEE
T ss_pred EEECCCcHHHHHHHHHHHhCCCeEEEECCCcCCH-HHHHHHHHHHHHcCCEEEEEecccCCHHHHHHHHHHhcCCCCCeE
Confidence 9985433332345555667798876322222111 11123556677787754221111 1 1234555554 466665
Q ss_pred EEEe
Q 010065 226 VVKA 229 (519)
Q Consensus 226 VvKP 229 (519)
.+.-
T Consensus 193 ~v~~ 196 (417)
T 3v5n_A 193 LVQM 196 (417)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 5554
No 434
>3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A*
Probab=45.60 E-value=24 Score=33.33 Aligned_cols=71 Identities=17% Similarity=0.196 Sum_probs=43.8
Q ss_pred CccEEEEEeCC---hhHHHHHHHHHhcCCCcEEEEecCCCCCc-------CCCCCccccCCCCCCHHHHHHHHHHc----
Q 010065 81 QRVVVLVIGGG---GREHALCYALKRSHSCDAVFCAPGNAGIS-------NSGDATCIPDLDVLDGDAVISFCRKW---- 146 (519)
Q Consensus 81 ~~~~vliiG~g---~~~~~l~~~l~~~~g~~~v~~~~~~~~~~-------~~~~~~~v~~~d~~d~~~l~~~~~~~---- 146 (519)
+.++++|+|++ |....+++.|.+. |.++++++.+..... .......+ ..|..|.+.+.+++++.
T Consensus 30 ~gk~~lVTGasg~~GIG~aia~~la~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~-~~Dv~d~~~v~~~~~~~~~~~ 107 (293)
T 3grk_A 30 QGKRGLILGVANNRSIAWGIAKAAREA-GAELAFTYQGDALKKRVEPLAEELGAFVAG-HCDVADAASIDAVFETLEKKW 107 (293)
T ss_dssp TTCEEEEECCCSSSSHHHHHHHHHHHT-TCEEEEEECSHHHHHHHHHHHHHHTCEEEE-ECCTTCHHHHHHHHHHHHHHT
T ss_pred CCCEEEEEcCCCCCcHHHHHHHHHHHC-CCEEEEEcCCHHHHHHHHHHHHhcCCceEE-ECCCCCHHHHHHHHHHHHHhc
Confidence 45789999964 2567789999887 888777653311000 00011222 56888877766665542
Q ss_pred -CCcEEEE
Q 010065 147 -SVGLVVV 153 (519)
Q Consensus 147 -~id~Vi~ 153 (519)
++|++|.
T Consensus 108 g~iD~lVn 115 (293)
T 3grk_A 108 GKLDFLVH 115 (293)
T ss_dssp SCCSEEEE
T ss_pred CCCCEEEE
Confidence 6898887
No 435
>3ip3_A Oxidoreductase, putative; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.14A {Thermotoga maritima}
Probab=45.52 E-value=8.1 Score=37.58 Aligned_cols=141 Identities=16% Similarity=0.131 Sum_probs=71.0
Q ss_pred ccEEEEEeCChhHHHHHHHHHhcCCCcEEEEecCCCC-C-cCCCC-CccccCC---CCCCHHHHHHHHHHcCCcEEEECC
Q 010065 82 RVVVLVIGGGGREHALCYALKRSHSCDAVFCAPGNAG-I-SNSGD-ATCIPDL---DVLDGDAVISFCRKWSVGLVVVGP 155 (519)
Q Consensus 82 ~~~vliiG~g~~~~~l~~~l~~~~g~~~v~~~~~~~~-~-~~~~~-~~~v~~~---d~~d~~~l~~~~~~~~id~Vi~g~ 155 (519)
+++|.|||.|+.....+..+ ..+++++.+.+.++. . ..... .... .+ -..|.+++ +...++|+|+...
T Consensus 2 ~~rvgiiG~G~~~~~~~~~l--~~~~~lvav~d~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l---l~~~~vD~V~I~t 75 (337)
T 3ip3_A 2 SLKICVIGSSGHFRYALEGL--DEECSITGIAPGVPEEDLSKLEKAISEM-NIKPKKYNNWWEM---LEKEKPDILVINT 75 (337)
T ss_dssp CEEEEEECSSSCHHHHHTTC--CTTEEEEEEECSSTTCCCHHHHHHHHTT-TCCCEECSSHHHH---HHHHCCSEEEECS
T ss_pred ceEEEEEccchhHHHHHHhc--CCCcEEEEEecCCchhhHHHHHHHHHHc-CCCCcccCCHHHH---hcCCCCCEEEEeC
Confidence 47899999875433333333 347777766543321 1 11000 0000 01 12355555 4456899999965
Q ss_pred ChhhHHHHHHHHHHCCCCeeCCcHHHHHHhcCHHHHHHHHHHcCCC--C-CC-eeecC-CHHHHHHHHH--HhCCCEEEE
Q 010065 156 EAPLVSGLANKLVKAGIPTFGPSSEAAALEGSKNFMKNLCDKYGIP--T-AK-YKTFT-DPNAAKQYIQ--EEGAPIVVK 228 (519)
Q Consensus 156 E~~~~~~~a~~le~~gip~~g~~~~~~~~~~dK~~~k~~l~~~Gi~--~-p~-~~~v~-~~~~~~~~~~--~~g~P~VvK 228 (519)
-...-..++..+-+.|.+++.-.|-+... .+=..+.+++++.|+. . .. ..... ....+.+.++ .+|-+..+.
T Consensus 76 p~~~H~~~~~~al~aGkhVl~EKPla~~~-~ea~~l~~~a~~~g~~~~~~v~~~~R~~p~~~~~k~~i~~g~iG~i~~i~ 154 (337)
T 3ip3_A 76 VFSLNGKILLEALERKIHAFVEKPIATTF-EDLEKIRSVYQKVRNEVFFTAMFGIRYRPHFLTAKKLVSEGAVGEIRLVN 154 (337)
T ss_dssp SHHHHHHHHHHHHHTTCEEEECSSSCSSH-HHHHHHHHHHHHHTTTCCEEECCGGGGSHHHHHHHHHHHHTTTSSEEEEE
T ss_pred CcchHHHHHHHHHHCCCcEEEeCCCCCCH-HHHHHHHHHHHHhCCceEEEecccccCCHHHHHHHHHHhcCCccceEEEE
Confidence 55443345555667798877443333222 1223455677788865 1 11 11111 2234555555 567666655
Q ss_pred e
Q 010065 229 A 229 (519)
Q Consensus 229 P 229 (519)
-
T Consensus 155 ~ 155 (337)
T 3ip3_A 155 T 155 (337)
T ss_dssp E
T ss_pred E
Confidence 3
No 436
>1f06_A MESO-diaminopimelate D-dehydrogenase; enzyme-NADPH-inhibitor ternary complex, oxidoreductase; HET: NDP 2NP; 2.10A {Corynebacterium glutamicum} SCOP: c.2.1.3 d.81.1.3 PDB: 1dap_A* 2dap_A* 3dap_A*
Probab=45.52 E-value=28 Score=33.46 Aligned_cols=88 Identities=14% Similarity=0.028 Sum_probs=45.3
Q ss_pred ccEEEEEeCChhHHHHHHHHHhcCCCcEEEEecCCCCCcCCCCCccccCCCCCCHHHHHHHHHHcCCcEEEECCChhhHH
Q 010065 82 RVVVLVIGGGGREHALCYALKRSHSCDAVFCAPGNAGISNSGDATCIPDLDVLDGDAVISFCRKWSVGLVVVGPEAPLVS 161 (519)
Q Consensus 82 ~~~vliiG~g~~~~~l~~~l~~~~g~~~v~~~~~~~~~~~~~~~~~v~~~d~~d~~~l~~~~~~~~id~Vi~g~E~~~~~ 161 (519)
+++|.|+|.|.....++..+.+..+.+.+.+...+... ... . .+ . -..|.++++ .++|+|+...-.....
T Consensus 3 ~irV~IiG~G~mG~~~~~~l~~~~~~elvav~d~~~~~-~~~-~-gv-~-~~~d~~~ll-----~~~DvViiatp~~~h~ 72 (320)
T 1f06_A 3 NIRVAIVGYGNLGRSVEKLIAKQPDMDLVGIFSRRATL-DTK-T-PV-F-DVADVDKHA-----DDVDVLFLCMGSATDI 72 (320)
T ss_dssp CEEEEEECCSHHHHHHHHHHTTCSSEEEEEEEESSSCC-SSS-S-CE-E-EGGGGGGTT-----TTCSEEEECSCTTTHH
T ss_pred CCEEEEEeecHHHHHHHHHHhcCCCCEEEEEEcCCHHH-hhc-C-CC-c-eeCCHHHHh-----cCCCEEEEcCCcHHHH
Confidence 57999999996555667777666566665543322111 111 0 01 0 012233332 4789999843222111
Q ss_pred HHHHHHHHCCCCeeCCcH
Q 010065 162 GLANKLVKAGIPTFGPSS 179 (519)
Q Consensus 162 ~~a~~le~~gip~~g~~~ 179 (519)
.....+-+.|.+++-..+
T Consensus 73 ~~~~~al~aG~~Vv~ekp 90 (320)
T 1f06_A 73 PEQAPKFAQFACTVDTYD 90 (320)
T ss_dssp HHHHHHHTTTSEEECCCC
T ss_pred HHHHHHHHCCCEEEECCC
Confidence 223334456888764433
No 437
>3to5_A CHEY homolog; alpha(5)beta(5), chemotaxis, FLIM, phosphorylation, motor AC signaling protein; 1.65A {Vibrio cholerae}
Probab=45.32 E-value=1.2e+02 Score=24.66 Aligned_cols=54 Identities=17% Similarity=0.194 Sum_probs=32.8
Q ss_pred CCccEEEEEeCChhHHHHHHHHHhcCCCcEEEEecCCCCCcCCCCCccccCCCCCCHHHHHHHHHHcCCcEEEE
Q 010065 80 GQRVVVLVIGGGGREHALCYALKRSHSCDAVFCAPGNAGISNSGDATCIPDLDVLDGDAVISFCRKWSVGLVVV 153 (519)
Q Consensus 80 ~~~~~vliiG~g~~~~~l~~~l~~~~g~~~v~~~~~~~~~~~~~~~~~v~~~d~~d~~~l~~~~~~~~id~Vi~ 153 (519)
.+++||||+.-......+...+.+..|++++... .+....++.+++.++|+|+.
T Consensus 10 ~k~~rILiVDD~~~~r~~l~~~L~~~G~~~v~~a--------------------~~g~~al~~~~~~~~Dlill 63 (134)
T 3to5_A 10 NKNMKILIVDDFSTMRRIVKNLLRDLGFNNTQEA--------------------DDGLTALPMLKKGDFDFVVT 63 (134)
T ss_dssp CTTCCEEEECSCHHHHHHHHHHHHHTTCCCEEEE--------------------SSHHHHHHHHHHHCCSEEEE
T ss_pred CCCCEEEEEeCCHHHHHHHHHHHHHcCCcEEEEE--------------------CCHHHHHHHHHhCCCCEEEE
Confidence 3567999998775333333333334477654321 12345566777889999998
No 438
>1c0p_A D-amino acid oxidase; alpha-beta-alpha motif, flavin containing protein, oxidoreductase; HET: FAD; 1.20A {Rhodosporidium toruloides} SCOP: c.4.1.2 d.16.1.3 PDB: 1c0i_A* 1c0l_A* 1c0k_A*
Probab=45.15 E-value=26 Score=33.96 Aligned_cols=35 Identities=20% Similarity=0.176 Sum_probs=28.6
Q ss_pred CccEEEEEeCChhHHHHHHHHHhcCCCcEEEEecCC
Q 010065 81 QRVVVLVIGGGGREHALCYALKRSHSCDAVFCAPGN 116 (519)
Q Consensus 81 ~~~~vliiG~g~~~~~l~~~l~~~~g~~~v~~~~~~ 116 (519)
..++|+|||+|......++.|++. |.++++++...
T Consensus 5 ~~~dVvVIG~Gi~Gls~A~~La~~-G~~V~vle~~~ 39 (363)
T 1c0p_A 5 SQKRVVVLGSGVIGLSSALILARK-GYSVHILARDL 39 (363)
T ss_dssp CSCEEEEECCSHHHHHHHHHHHHT-TCEEEEEESSC
T ss_pred CCCCEEEECCCHHHHHHHHHHHhC-CCEEEEEeccC
Confidence 357899999997667788999887 99999887553
No 439
>3cea_A MYO-inositol 2-dehydrogenase; NP_786804.1, oxidoreductase FA NAD-binding rossmann fold, structural genomics; HET: NAD; 2.40A {Lactobacillus plantarum WCFS1}
Probab=45.14 E-value=40 Score=32.52 Aligned_cols=89 Identities=10% Similarity=0.116 Sum_probs=47.1
Q ss_pred CccEEEEEeCChhHHHHHHHHH-hcCCCcEEEEecCCCCCc-CCCCCccccCC--CCCCHHHHHHHHHHcCCcEEEECCC
Q 010065 81 QRVVVLVIGGGGREHALCYALK-RSHSCDAVFCAPGNAGIS-NSGDATCIPDL--DVLDGDAVISFCRKWSVGLVVVGPE 156 (519)
Q Consensus 81 ~~~~vliiG~g~~~~~l~~~l~-~~~g~~~v~~~~~~~~~~-~~~~~~~v~~~--d~~d~~~l~~~~~~~~id~Vi~g~E 156 (519)
++++|.|||.|......+..+. +..+++++.+.+.++... ... ... .. -..+.+++ +...++|+|+...-
T Consensus 7 ~~~~v~iiG~G~ig~~~~~~l~~~~~~~~~vav~d~~~~~~~~~a--~~~-g~~~~~~~~~~~---l~~~~~D~V~i~tp 80 (346)
T 3cea_A 7 KPLRAAIIGLGRLGERHARHLVNKIQGVKLVAACALDSNQLEWAK--NEL-GVETTYTNYKDM---IDTENIDAIFIVAP 80 (346)
T ss_dssp CCEEEEEECCSTTHHHHHHHHHHTCSSEEEEEEECSCHHHHHHHH--HTT-CCSEEESCHHHH---HTTSCCSEEEECSC
T ss_pred CcceEEEEcCCHHHHHHHHHHHhcCCCcEEEEEecCCHHHHHHHH--HHh-CCCcccCCHHHH---hcCCCCCEEEEeCC
Confidence 4689999999966555667776 545777665533222110 000 000 01 12344443 44457999998543
Q ss_pred hhhHHHHHHHHHHCCCCee
Q 010065 157 APLVSGLANKLVKAGIPTF 175 (519)
Q Consensus 157 ~~~~~~~a~~le~~gip~~ 175 (519)
...-..++..+-+.|.+++
T Consensus 81 ~~~h~~~~~~al~~G~~v~ 99 (346)
T 3cea_A 81 TPFHPEMTIYAMNAGLNVF 99 (346)
T ss_dssp GGGHHHHHHHHHHTTCEEE
T ss_pred hHhHHHHHHHHHHCCCEEE
Confidence 3332234444445687775
No 440
>3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium}
Probab=44.35 E-value=13 Score=34.93 Aligned_cols=70 Identities=19% Similarity=0.186 Sum_probs=43.3
Q ss_pred ccEEEEEeCC-hhHHHHHHHHHhcCCCcEEEEecCCCCCcC----C-CCCccccCCCCCCHHHHHHHHHHc----CCcEE
Q 010065 82 RVVVLVIGGG-GREHALCYALKRSHSCDAVFCAPGNAGISN----S-GDATCIPDLDVLDGDAVISFCRKW----SVGLV 151 (519)
Q Consensus 82 ~~~vliiG~g-~~~~~l~~~l~~~~g~~~v~~~~~~~~~~~----~-~~~~~v~~~d~~d~~~l~~~~~~~----~id~V 151 (519)
.++++|+|++ +....++..|.+. |.++++++.+...... . .....+ ..|..|.+.+.+++++. ++|.+
T Consensus 30 ~k~vlVTGas~GIG~aia~~l~~~-G~~Vi~~~r~~~~~~~~~~~~~~~~~~~-~~Dl~~~~~v~~~~~~~~~~~~id~l 107 (281)
T 3ppi_A 30 GASAIVSGGAGGLGEATVRRLHAD-GLGVVIADLAAEKGKALADELGNRAEFV-STNVTSEDSVLAAIEAANQLGRLRYA 107 (281)
T ss_dssp TEEEEEETTTSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHCTTEEEE-ECCTTCHHHHHHHHHHHTTSSEEEEE
T ss_pred CCEEEEECCCChHHHHHHHHHHHC-CCEEEEEeCChHHHHHHHHHhCCceEEE-EcCCCCHHHHHHHHHHHHHhCCCCeE
Confidence 4689999976 4566788888887 8988777543111000 0 011223 56888877777666542 57777
Q ss_pred EE
Q 010065 152 VV 153 (519)
Q Consensus 152 i~ 153 (519)
+.
T Consensus 108 v~ 109 (281)
T 3ppi_A 108 VV 109 (281)
T ss_dssp EE
T ss_pred EE
Confidence 75
No 441
>4dgk_A Phytoene dehydrogenase; the FAD/NAD(P)-binding rossmann fold, oxidoreductase; 2.35A {Pantoea ananatis}
Probab=44.26 E-value=16 Score=37.44 Aligned_cols=33 Identities=21% Similarity=0.175 Sum_probs=26.8
Q ss_pred ccEEEEEeCChhHHHHHHHHHhcCCCcEEEEecC
Q 010065 82 RVVVLVIGGGGREHALCYALKRSHSCDAVFCAPG 115 (519)
Q Consensus 82 ~~~vliiG~g~~~~~l~~~l~~~~g~~~v~~~~~ 115 (519)
+|+|+|||+|-.....+..|++. |++++++...
T Consensus 1 Mk~VvVIGaG~~GL~aA~~La~~-G~~V~VlEa~ 33 (501)
T 4dgk_A 1 MKPTTVIGAGFGGLALAIRLQAA-GIPVLLLEQR 33 (501)
T ss_dssp CCCEEEECCHHHHHHHHHHHHHT-TCCEEEECCC
T ss_pred CCCEEEECCcHHHHHHHHHHHHC-CCcEEEEccC
Confidence 57899999996666678888887 9999888644
No 442
>3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} SCOP: c.2.1.0
Probab=44.15 E-value=90 Score=28.79 Aligned_cols=33 Identities=15% Similarity=0.266 Sum_probs=25.3
Q ss_pred CccEEEEEeCC-hhHHHHHHHHHhcCCCcEEEEec
Q 010065 81 QRVVVLVIGGG-GREHALCYALKRSHSCDAVFCAP 114 (519)
Q Consensus 81 ~~~~vliiG~g-~~~~~l~~~l~~~~g~~~v~~~~ 114 (519)
+.++++|+|++ +....+++.|.+. |.+++.++.
T Consensus 10 ~~k~~lVTGas~GIG~a~a~~la~~-G~~V~~~~r 43 (277)
T 3tsc_A 10 EGRVAFITGAARGQGRAHAVRMAAE-GADIIAVDI 43 (277)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHT-TCEEEEEEC
T ss_pred CCCEEEEECCccHHHHHHHHHHHHc-CCEEEEEec
Confidence 45789999976 4556788899887 998887754
No 443
>1edo_A Beta-keto acyl carrier protein reductase; nucleotide fold, rossmann fold, oxidoreductase; HET: NAP; 2.30A {Brassica napus} SCOP: c.2.1.2 PDB: 2cdh_G
Probab=44.13 E-value=20 Score=32.43 Aligned_cols=69 Identities=23% Similarity=0.342 Sum_probs=41.4
Q ss_pred cEEEEEeCC-hhHHHHHHHHHhcCCCcEEEEecCCCC-CcC--------CCCCccccCCCCCCHHHHHHHHHHc-----C
Q 010065 83 VVVLVIGGG-GREHALCYALKRSHSCDAVFCAPGNAG-ISN--------SGDATCIPDLDVLDGDAVISFCRKW-----S 147 (519)
Q Consensus 83 ~~vliiG~g-~~~~~l~~~l~~~~g~~~v~~~~~~~~-~~~--------~~~~~~v~~~d~~d~~~l~~~~~~~-----~ 147 (519)
++++|+|++ +....+++.|.+. |++++.+...+.. ... ......+ ..|..|.+.+.+++++. +
T Consensus 2 k~vlVTGasggiG~~la~~l~~~-G~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~-~~D~~~~~~~~~~~~~~~~~~g~ 79 (244)
T 1edo_A 2 PVVVVTGASRGIGKAIALSLGKA-GCKVLVNYARSAKAAEEVSKQIEAYGGQAITF-GGDVSKEADVEAMMKTAIDAWGT 79 (244)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHT-TCEEEEEESSCHHHHHHHHHHHHHHTCEEEEE-ECCTTSHHHHHHHHHHHHHHSSC
T ss_pred CEEEEeCCCchHHHHHHHHHHHC-CCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEE-eCCCCCHHHHHHHHHHHHHHcCC
Confidence 578888866 4556788888877 8887764222110 000 0011122 46778877776666542 6
Q ss_pred CcEEEE
Q 010065 148 VGLVVV 153 (519)
Q Consensus 148 id~Vi~ 153 (519)
+|++|.
T Consensus 80 id~li~ 85 (244)
T 1edo_A 80 IDVVVN 85 (244)
T ss_dssp CSEEEE
T ss_pred CCEEEE
Confidence 899987
No 444
>3dty_A Oxidoreductase, GFO/IDH/MOCA family; MGCL2, tetramer, PSI-2, 11131, NYSGXRC, structural genomics, protein structure initiative; 2.04A {Pseudomonas syringae PV}
Probab=43.83 E-value=9.9 Score=37.98 Aligned_cols=146 Identities=12% Similarity=0.021 Sum_probs=69.8
Q ss_pred CccEEEEEeCCh---hHHHHHHHHHhcCCCcEEE-EecCCCCCcCCCCCccccCC----CCCCHHHHHHHHH--HcCCcE
Q 010065 81 QRVVVLVIGGGG---REHALCYALKRSHSCDAVF-CAPGNAGISNSGDATCIPDL----DVLDGDAVISFCR--KWSVGL 150 (519)
Q Consensus 81 ~~~~vliiG~g~---~~~~l~~~l~~~~g~~~v~-~~~~~~~~~~~~~~~~v~~~----d~~d~~~l~~~~~--~~~id~ 150 (519)
++++|.|||.|. ....-+..++...+++++. +.+.++..... ....+ .+ -..|.+++++-.+ ..++|+
T Consensus 11 ~~~rvgiiG~G~~~~ig~~h~~~~~~~~~~~lva~v~d~~~~~a~~-~a~~~-g~~~~~~~~~~~~ll~~~~~~~~~vD~ 88 (398)
T 3dty_A 11 QPIRWAMVGGGSQSQIGYIHRCAALRDNTFVLVAGAFDIDPIRGSA-FGEQL-GVDSERCYADYLSMFEQEARRADGIQA 88 (398)
T ss_dssp SCEEEEEEECCTTCSSHHHHHHHHHGGGSEEEEEEECCSSHHHHHH-HHHHT-TCCGGGBCSSHHHHHHHHTTCTTCCSE
T ss_pred CcceEEEEcCCccchhHHHHHHHHhhCCCeEEEEEEeCCCHHHHHH-HHHHh-CCCcceeeCCHHHHHhcccccCCCCCE
Confidence 468999999986 3333344555444566654 32222111000 00001 11 1345666654221 135999
Q ss_pred EEECCChhhHHHHHHHHHHCCCCeeCCcHHHHHHhcCHHHHHHHHHHcCCCCCCe-eecC--CHHHHHHHHH--HhCCCE
Q 010065 151 VVVGPEAPLVSGLANKLVKAGIPTFGPSSEAAALEGSKNFMKNLCDKYGIPTAKY-KTFT--DPNAAKQYIQ--EEGAPI 225 (519)
Q Consensus 151 Vi~g~E~~~~~~~a~~le~~gip~~g~~~~~~~~~~dK~~~k~~l~~~Gi~~p~~-~~v~--~~~~~~~~~~--~~g~P~ 225 (519)
|+...-...-..++..+-+.|.+++.-.|-+... .+=..+.+++++.|+..--. ..-. ....+.+.++ .+|-+.
T Consensus 89 V~i~tp~~~H~~~~~~al~aGkhVl~EKPla~~~-~ea~~l~~~a~~~g~~~~v~~~~r~~p~~~~~k~~i~~G~iG~i~ 167 (398)
T 3dty_A 89 VSIATPNGTHYSITKAALEAGLHVVCEKPLCFTV-EQAENLRELSHKHNRIVGVTYGYAGHQLIEQAREMIAAGELGDVR 167 (398)
T ss_dssp EEEESCGGGHHHHHHHHHHTTCEEEECSCSCSCH-HHHHHHHHHHHHTTCCEEECCGGGGSHHHHHHHHHHHTTTTCSEE
T ss_pred EEECCCcHHHHHHHHHHHHCCCeEEEeCCCcCCH-HHHHHHHHHHHHcCCeEEEEecccCCHHHHHHHHHHhcCCCCCeE
Confidence 9985433332344555556798887433322211 11223456677888754211 1111 2234555554 466666
Q ss_pred EEEe
Q 010065 226 VVKA 229 (519)
Q Consensus 226 VvKP 229 (519)
.+.-
T Consensus 168 ~v~~ 171 (398)
T 3dty_A 168 MVHM 171 (398)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 6554
No 445
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=43.67 E-value=27 Score=33.01 Aligned_cols=35 Identities=14% Similarity=0.226 Sum_probs=27.9
Q ss_pred CCccEEEEEeCChhHHHHHHHHHhcCCCcEEEEecC
Q 010065 80 GQRVVVLVIGGGGREHALCYALKRSHSCDAVFCAPG 115 (519)
Q Consensus 80 ~~~~~vliiG~g~~~~~l~~~l~~~~g~~~v~~~~~ 115 (519)
...++|+|||+|......+..|++. |+++++++..
T Consensus 14 ~~~~dvvIIG~G~aGl~aA~~l~~~-g~~v~lie~~ 48 (319)
T 3cty_A 14 ERDFDVVIVGAGAAGFSAAVYAARS-GFSVAILDKA 48 (319)
T ss_dssp CCEEEEEEECCSHHHHHHHHHHHHT-TCCEEEEESS
T ss_pred cCCCcEEEECcCHHHHHHHHHHHhC-CCcEEEEeCC
Confidence 3457899999997666778888877 8999888764
No 446
>2rh8_A Anthocyanidin reductase; flavonoids, rossmann fold, short chain dehydrogenase/reductase, oxidoreductase; 2.22A {Vitis vinifera} PDB: 3hfs_A
Probab=43.56 E-value=23 Score=33.86 Aligned_cols=31 Identities=16% Similarity=0.096 Sum_probs=23.2
Q ss_pred ccEEEEEeCC-hhHHHHHHHHHhcCCCcEEEEe
Q 010065 82 RVVVLVIGGG-GREHALCYALKRSHSCDAVFCA 113 (519)
Q Consensus 82 ~~~vliiG~g-~~~~~l~~~l~~~~g~~~v~~~ 113 (519)
+++|||+|+. .....++..|.+. |++++.+.
T Consensus 9 ~~~vlVTGatGfIG~~l~~~Ll~~-G~~V~~~~ 40 (338)
T 2rh8_A 9 KKTACVVGGTGFVASLLVKLLLQK-GYAVNTTV 40 (338)
T ss_dssp CCEEEEECTTSHHHHHHHHHHHHT-TCEEEEEE
T ss_pred CCEEEEECCchHHHHHHHHHHHHC-CCEEEEEE
Confidence 4789999965 4556688888877 88877654
No 447
>1b73_A Glutamate racemase; isomerase; 2.30A {Aquifex pyrophilus} SCOP: c.78.2.1 c.78.2.1 PDB: 1b74_A*
Probab=43.39 E-value=43 Score=30.94 Aligned_cols=38 Identities=21% Similarity=0.334 Sum_probs=23.2
Q ss_pred HHHHHcCCcEEEECCChhhHHHHHHHHHHCCCCeeCCc
Q 010065 141 SFCRKWSVGLVVVGPEAPLVSGLANKLVKAGIPTFGPS 178 (519)
Q Consensus 141 ~~~~~~~id~Vi~g~E~~~~~~~a~~le~~gip~~g~~ 178 (519)
+.+.+.++|+|+..+-......+.+.-+..++|++|..
T Consensus 56 ~~L~~~g~d~iviaCnTa~~~~~~~lr~~~~iPvigi~ 93 (254)
T 1b73_A 56 GFLKDKGVDIIVVACNTASAYALERLKKEINVPVFGVI 93 (254)
T ss_dssp HHHHTTTCSEEEECCHHHHTTSHHHHHHHSSSCEEESH
T ss_pred HHHHHCCCCEEEEeCchhhHHHHHHHHHhCCCCEEeee
Confidence 34445689999987655431112233456799999753
No 448
>1oc2_A DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnose; HET: TDX NAD; 1.5A {Streptococcus suis} SCOP: c.2.1.2 PDB: 1ker_A* 1ket_A* 1kep_A*
Probab=43.28 E-value=54 Score=31.29 Aligned_cols=69 Identities=14% Similarity=0.115 Sum_probs=41.9
Q ss_pred ccEEEEEeCC-hhHHHHHHHHHhcC-CCcEEEEecCCC-C-CcCC-----CCCccccCCCCCCHHHHHHHHHHcCCcEEE
Q 010065 82 RVVVLVIGGG-GREHALCYALKRSH-SCDAVFCAPGNA-G-ISNS-----GDATCIPDLDVLDGDAVISFCRKWSVGLVV 152 (519)
Q Consensus 82 ~~~vliiG~g-~~~~~l~~~l~~~~-g~~~v~~~~~~~-~-~~~~-----~~~~~v~~~d~~d~~~l~~~~~~~~id~Vi 152 (519)
+++|||+|+. .....++..|.+.. |++++.++.... . .... .....+ ..|..|.+.+.++++ ++|+||
T Consensus 4 m~~vlVTGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~-~~Dl~d~~~~~~~~~--~~d~vi 80 (348)
T 1oc2_A 4 FKNIIVTGGAGFIGSNFVHYVYNNHPDVHVTVLDKLTYAGNKANLEAILGDRVELV-VGDIADAELVDKLAA--KADAIV 80 (348)
T ss_dssp CSEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCCGGGTGGGCSSSEEEE-ECCTTCHHHHHHHHT--TCSEEE
T ss_pred CcEEEEeCCccHHHHHHHHHHHHhCCCCEEEEEeCCCCCCChhHHhhhccCCeEEE-ECCCCCHHHHHHHhh--cCCEEE
Confidence 4789999965 44566788887653 677776654321 1 0100 011222 468888888777765 468888
Q ss_pred E
Q 010065 153 V 153 (519)
Q Consensus 153 ~ 153 (519)
-
T Consensus 81 h 81 (348)
T 1oc2_A 81 H 81 (348)
T ss_dssp E
T ss_pred E
Confidence 7
No 449
>3oz2_A Digeranylgeranylglycerophospholipid reductase; structural genomics, joint center for structural genomics; HET: MSE FAD OZ2; 1.60A {Thermoplasma acidophilum}
Probab=43.26 E-value=19 Score=35.05 Aligned_cols=32 Identities=19% Similarity=0.238 Sum_probs=26.8
Q ss_pred ccEEEEEeCChhHHHHHHHHHhcCCCcEEEEec
Q 010065 82 RVVVLVIGGGGREHALCYALKRSHSCDAVFCAP 114 (519)
Q Consensus 82 ~~~vliiG~g~~~~~l~~~l~~~~g~~~v~~~~ 114 (519)
++.|+|+|+|.....++..|++. |+++++++.
T Consensus 4 ~yDViIVGaGpaGl~~A~~La~~-G~~V~v~Er 35 (397)
T 3oz2_A 4 TYDVLVVGGGPGGSTAARYAAKY-GLKTLMIEK 35 (397)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHT-TCCEEEECS
T ss_pred CCCEEEECcCHHHHHHHHHHHHC-CCcEEEEeC
Confidence 47899999997667788899887 999998853
No 450
>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1}
Probab=43.20 E-value=32 Score=31.77 Aligned_cols=71 Identities=11% Similarity=0.134 Sum_probs=42.3
Q ss_pred CccEEEEEeCC-hhHHHHHHHHHhcCCCcEEEEecCCCC---Cc-------C-CCCCccccCCCCCCHHHHHHHHHHc--
Q 010065 81 QRVVVLVIGGG-GREHALCYALKRSHSCDAVFCAPGNAG---IS-------N-SGDATCIPDLDVLDGDAVISFCRKW-- 146 (519)
Q Consensus 81 ~~~~vliiG~g-~~~~~l~~~l~~~~g~~~v~~~~~~~~---~~-------~-~~~~~~v~~~d~~d~~~l~~~~~~~-- 146 (519)
+.++++|+|++ +....++..|.+. |.++++++..... .. . -.....+ ..|..|.+.+.+++++.
T Consensus 10 ~~k~vlVTGas~GIG~aia~~la~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~-~~Dv~d~~~v~~~~~~~~~ 87 (262)
T 3ksu_A 10 KNKVIVIAGGIKNLGALTAKTFALE-SVNLVLHYHQAKDSDTANKLKDELEDQGAKVALY-QSDLSNEEEVAKLFDFAEK 87 (262)
T ss_dssp TTCEEEEETCSSHHHHHHHHHHTTS-SCEEEEEESCGGGHHHHHHHHHHHHTTTCEEEEE-ECCCCSHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCchHHHHHHHHHHHC-CCEEEEEecCccCHHHHHHHHHHHHhcCCcEEEE-ECCCCCHHHHHHHHHHHHH
Confidence 35789999976 4556788888877 8888776422100 00 0 0011122 56777777666665532
Q ss_pred ---CCcEEEE
Q 010065 147 ---SVGLVVV 153 (519)
Q Consensus 147 ---~id~Vi~ 153 (519)
++|+++.
T Consensus 88 ~~g~iD~lvn 97 (262)
T 3ksu_A 88 EFGKVDIAIN 97 (262)
T ss_dssp HHCSEEEEEE
T ss_pred HcCCCCEEEE
Confidence 6888887
No 451
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=42.75 E-value=23 Score=33.19 Aligned_cols=34 Identities=24% Similarity=0.283 Sum_probs=27.4
Q ss_pred CccEEEEEeCChhHHHHHHHHHhcCCCcEEE-EecC
Q 010065 81 QRVVVLVIGGGGREHALCYALKRSHSCDAVF-CAPG 115 (519)
Q Consensus 81 ~~~~vliiG~g~~~~~l~~~l~~~~g~~~v~-~~~~ 115 (519)
++++|+|||+|......+..|++. |+++++ ++.+
T Consensus 3 ~~~~vvIIG~G~aGl~aA~~l~~~-g~~v~li~e~~ 37 (315)
T 3r9u_A 3 AMLDVAIIGGGPAGLSAGLYATRG-GLKNVVMFEKG 37 (315)
T ss_dssp SCEEEEEECCSHHHHHHHHHHHHH-TCSCEEEECSS
T ss_pred CCceEEEECCCHHHHHHHHHHHHC-CCCeEEEEeCC
Confidence 467999999997777778888877 899888 7653
No 452
>2gek_A Phosphatidylinositol mannosyltransferase (PIMA); GT4 glycosyltransferase, rossmann fold, complex; HET: GDP; 2.40A {Mycobacterium smegmatis} PDB: 2gej_A*
Probab=42.69 E-value=78 Score=30.59 Aligned_cols=91 Identities=14% Similarity=0.215 Sum_probs=45.5
Q ss_pred CccEEEEEeC------Chh---HHHHHHHHHhcCCCcEEEEecCCCCC--cCC--CCCccccCCCC--------C---CH
Q 010065 81 QRVVVLVIGG------GGR---EHALCYALKRSHSCDAVFCAPGNAGI--SNS--GDATCIPDLDV--------L---DG 136 (519)
Q Consensus 81 ~~~~vliiG~------g~~---~~~l~~~l~~~~g~~~v~~~~~~~~~--~~~--~~~~~v~~~d~--------~---d~ 136 (519)
++|||+++.. ||. -..++..|.+. |+++.++....... ... .....+ .+.. . ..
T Consensus 19 ~~MkIl~i~~~~~~~~gG~~~~~~~l~~~L~~~-G~~V~v~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~ 96 (406)
T 2gek_A 19 SHMRIGMVCPYSFDVPGGVQSHVLQLAEVLRDA-GHEVSVLAPASPHVKLPDYVVSGGKAV-PIPYNGSVARLRFGPATH 96 (406)
T ss_dssp --CEEEEECSSCTTSCCHHHHHHHHHHHHHHHT-TCEEEEEESCCTTSCCCTTEEECCCCC-------------CCHHHH
T ss_pred CcceEEEEeccCCCCCCcHHHHHHHHHHHHHHC-CCeEEEEecCCccccCCcccccCCcEE-eccccCCcccccccHHHH
Confidence 3466666652 232 24677888776 89988876553221 000 000001 1110 0 12
Q ss_pred HHHHHHHHHcCCcEEEEC-CChhhHHHHHHHHHHCCCCee
Q 010065 137 DAVISFCRKWSVGLVVVG-PEAPLVSGLANKLVKAGIPTF 175 (519)
Q Consensus 137 ~~l~~~~~~~~id~Vi~g-~E~~~~~~~a~~le~~gip~~ 175 (519)
..+.+++++.++|+|+.. ...... ........++|++
T Consensus 97 ~~l~~~l~~~~~Dii~~~~~~~~~~--~~~~~~~~~~~~i 134 (406)
T 2gek_A 97 RKVKKWIAEGDFDVLHIHEPNAPSL--SMLALQAAEGPIV 134 (406)
T ss_dssp HHHHHHHHHHCCSEEEEECCCSSSH--HHHHHHHEESSEE
T ss_pred HHHHHHHHhcCCCEEEECCccchHH--HHHHHHhcCCCEE
Confidence 567778888899999983 222222 1122344578875
No 453
>1xea_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics, protein structure initiative, NYSGXRC, VCA1048, GFO/IDH/MOCA family oxidoreductase; 2.65A {Vibrio cholerae} SCOP: c.2.1.3 d.81.1.5
Probab=42.68 E-value=9.7 Score=36.72 Aligned_cols=112 Identities=23% Similarity=0.274 Sum_probs=54.6
Q ss_pred ccEEEEEeCChhHH-HHHHHHHhcCCCcEEEEecCCCCCc-CCCCCccccCCC--CCCHHHHHHHHHHcCCcEEEECCCh
Q 010065 82 RVVVLVIGGGGREH-ALCYALKRSHSCDAVFCAPGNAGIS-NSGDATCIPDLD--VLDGDAVISFCRKWSVGLVVVGPEA 157 (519)
Q Consensus 82 ~~~vliiG~g~~~~-~l~~~l~~~~g~~~v~~~~~~~~~~-~~~~~~~v~~~d--~~d~~~l~~~~~~~~id~Vi~g~E~ 157 (519)
+++|.|||.|.... ..+..+.+..++++++++. ++... ... ..+ .+. ..+..++ + ..++|+|+...-.
T Consensus 2 ~~~igiIG~G~ig~~~~~~~l~~~~~~~l~v~d~-~~~~~~~~a--~~~-g~~~~~~~~~~~---l-~~~~D~V~i~tp~ 73 (323)
T 1xea_A 2 SLKIAMIGLGDIAQKAYLPVLAQWPDIELVLCTR-NPKVLGTLA--TRY-RVSATCTDYRDV---L-QYGVDAVMIHAAT 73 (323)
T ss_dssp CEEEEEECCCHHHHHTHHHHHTTSTTEEEEEECS-CHHHHHHHH--HHT-TCCCCCSSTTGG---G-GGCCSEEEECSCG
T ss_pred CcEEEEECCCHHHHHHHHHHHHhCCCceEEEEeC-CHHHHHHHH--HHc-CCCccccCHHHH---h-hcCCCEEEEECCc
Confidence 46899999996544 2566666555677773332 22110 000 000 011 1111122 2 3579999986444
Q ss_pred hhHHHHHHHHHHCCCCeeCCcHHHHHHhcCHHHHHHHHHHcCCCC
Q 010065 158 PLVSGLANKLVKAGIPTFGPSSEAAALEGSKNFMKNLCDKYGIPT 202 (519)
Q Consensus 158 ~~~~~~a~~le~~gip~~g~~~~~~~~~~dK~~~k~~l~~~Gi~~ 202 (519)
..-..++..+-+.|.+++.-.+-+... .+-..+.+++++.|+..
T Consensus 74 ~~h~~~~~~al~~Gk~V~~EKP~~~~~-~~~~~l~~~a~~~g~~~ 117 (323)
T 1xea_A 74 DVHSTLAAFFLHLGIPTFVDKPLAASA-QECENLYELAEKHHQPL 117 (323)
T ss_dssp GGHHHHHHHHHHTTCCEEEESCSCSSH-HHHHHHHHHHHHTTCCE
T ss_pred hhHHHHHHHHHHCCCeEEEeCCCcCCH-HHHHHHHHHHHhcCCeE
Confidence 333344444445688775322211111 11233556677888764
No 454
>2ywl_A Thioredoxin reductase related protein; uncharacterized conserved protein, rossmann fold, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2cvj_A*
Probab=42.61 E-value=31 Score=29.49 Aligned_cols=32 Identities=25% Similarity=0.362 Sum_probs=26.2
Q ss_pred cEEEEEeCChhHHHHHHHHHhcCCCcEEEEecC
Q 010065 83 VVVLVIGGGGREHALCYALKRSHSCDAVFCAPG 115 (519)
Q Consensus 83 ~~vliiG~g~~~~~l~~~l~~~~g~~~v~~~~~ 115 (519)
++|+|+|+|.....++..|++. |.++.+++..
T Consensus 2 ~~vvIIGgG~~Gl~~A~~l~~~-g~~v~lie~~ 33 (180)
T 2ywl_A 2 WDVIVVGGGPSGLSAALFLARA-GLKVLVLDGG 33 (180)
T ss_dssp EEEEEECCSHHHHHHHHHHHHT-TCCEEEEECS
T ss_pred CeEEEECCCHHHHHHHHHHHHC-CCcEEEEeCC
Confidence 6899999997667778888876 8998888654
No 455
>4fzr_A SSFS6; structural genomics, PSI-biology, protein structure initiati enzyme discovery for natural product biosynthesis, natPro; 2.40A {Streptomyces SP} PDB: 4g2t_A*
Probab=42.41 E-value=20 Score=35.31 Aligned_cols=35 Identities=20% Similarity=0.387 Sum_probs=22.1
Q ss_pred HHHHHHHHcCCcEEEECCChhhHHHHHHHHHHCCCCee
Q 010065 138 AVISFCRKWSVGLVVVGPEAPLVSGLANKLVKAGIPTF 175 (519)
Q Consensus 138 ~l~~~~~~~~id~Vi~g~E~~~~~~~a~~le~~gip~~ 175 (519)
.+.+++++.++|+|+... ...... -..+.+|+|++
T Consensus 114 ~l~~~~~~~~pDlVv~d~-~~~~~~--~~a~~~giP~v 148 (398)
T 4fzr_A 114 EALALAERWKPDLVLTET-YSLTGP--LVAATLGIPWI 148 (398)
T ss_dssp HHHHHHHHHCCSEEEEET-TCTHHH--HHHHHHTCCEE
T ss_pred HHHHHHHhCCCCEEEECc-cccHHH--HHHHhhCCCEE
Confidence 566777888999998632 222112 22456799976
No 456
>3vh1_A Ubiquitin-like modifier-activating enzyme ATG7; autophagy, zinc binding, metal binding protein; 3.00A {Saccharomyces cerevisiae} PDB: 3vh2_A
Probab=42.32 E-value=1.3e+02 Score=31.66 Aligned_cols=31 Identities=19% Similarity=0.186 Sum_probs=25.9
Q ss_pred ccEEEEEeCChhHHHHHHHHHhcCCCcEEEEe
Q 010065 82 RVVVLVIGGGGREHALCYALKRSHSCDAVFCA 113 (519)
Q Consensus 82 ~~~vliiG~g~~~~~l~~~l~~~~g~~~v~~~ 113 (519)
..+|+|+|.|+...+++..|... |+..+.+.
T Consensus 327 ~~kVLIVGaGGLGs~va~~La~a-GVG~ItLv 357 (598)
T 3vh1_A 327 NTKVLLLGAGTLGCYVSRALIAW-GVRKITFV 357 (598)
T ss_dssp TCEEEEECCSHHHHHHHHHHHTT-TCCEEEEE
T ss_pred CCeEEEECCCHHHHHHHHHHHHc-CCCEEEEE
Confidence 46999999999888889999877 88776654
No 457
>1y56_B Sarcosine oxidase; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=42.31 E-value=26 Score=34.13 Aligned_cols=35 Identities=17% Similarity=0.255 Sum_probs=28.4
Q ss_pred CccEEEEEeCChhHHHHHHHHHhcCCCcEEEEecCC
Q 010065 81 QRVVVLVIGGGGREHALCYALKRSHSCDAVFCAPGN 116 (519)
Q Consensus 81 ~~~~vliiG~g~~~~~l~~~l~~~~g~~~v~~~~~~ 116 (519)
..++|+|||+|......++.|++. |+++++++...
T Consensus 4 ~~~dVvIIGgGi~Gl~~A~~La~~-G~~V~lle~~~ 38 (382)
T 1y56_B 4 EKSEIVVIGGGIVGVTIAHELAKR-GEEVTVIEKRF 38 (382)
T ss_dssp SBCSEEEECCSHHHHHHHHHHHHT-TCCEEEECSSS
T ss_pred CcCCEEEECCCHHHHHHHHHHHHC-CCeEEEEeCCC
Confidence 356899999997667788999887 99998887654
No 458
>3icc_A Putative 3-oxoacyl-(acyl carrier protein) reducta; structural genomics, putative 3-oxoacyl-(acyl carrier protei reductase, oxidoreductase; HET: NAP MES; 1.87A {Bacillus anthracis str}
Probab=42.29 E-value=27 Score=31.86 Aligned_cols=34 Identities=21% Similarity=0.174 Sum_probs=25.0
Q ss_pred CCCccEEEEEeCC-hhHHHHHHHHHhcCCCcEEEEe
Q 010065 79 AGQRVVVLVIGGG-GREHALCYALKRSHSCDAVFCA 113 (519)
Q Consensus 79 ~~~~~~vliiG~g-~~~~~l~~~l~~~~g~~~v~~~ 113 (519)
+.+.++++|+|++ +....++..|.+. |..++++.
T Consensus 4 ~l~~k~vlITGas~gIG~~~a~~l~~~-G~~v~~~~ 38 (255)
T 3icc_A 4 MLKGKVALVTGASRGIGRAIAKRLAND-GALVAIHY 38 (255)
T ss_dssp TTTTCEEEETTCSSHHHHHHHHHHHHT-TCEEEEEE
T ss_pred ccCCCEEEEECCCChHHHHHHHHHHHC-CCeEEEEe
Confidence 3456789999976 4566788888877 88777653
No 459
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=42.01 E-value=26 Score=31.59 Aligned_cols=35 Identities=26% Similarity=0.220 Sum_probs=25.8
Q ss_pred CCccEEEEEeCC-hhHHHHHHHHHhcCCCcEEEEecC
Q 010065 80 GQRVVVLVIGGG-GREHALCYALKRSHSCDAVFCAPG 115 (519)
Q Consensus 80 ~~~~~vliiG~g-~~~~~l~~~l~~~~g~~~v~~~~~ 115 (519)
.+.|+|+|+|+. +....++..|.+. |++++.++.+
T Consensus 19 l~~~~ilVtGatG~iG~~l~~~L~~~-G~~V~~~~R~ 54 (236)
T 3e8x_A 19 FQGMRVLVVGANGKVARYLLSELKNK-GHEPVAMVRN 54 (236)
T ss_dssp --CCEEEEETTTSHHHHHHHHHHHHT-TCEEEEEESS
T ss_pred cCCCeEEEECCCChHHHHHHHHHHhC-CCeEEEEECC
Confidence 346899999974 4567788888887 8888877643
No 460
>2we8_A Xanthine dehydrogenase; oxidoreductase; 2.30A {Mycobacterium smegmatis} PDB: 2we7_A
Probab=41.94 E-value=1.2e+02 Score=29.95 Aligned_cols=34 Identities=18% Similarity=0.124 Sum_probs=27.6
Q ss_pred CccEEEEEeCChhHHHHHHHHHhcCCCcEEEEecC
Q 010065 81 QRVVVLVIGGGGREHALCYALKRSHSCDAVFCAPG 115 (519)
Q Consensus 81 ~~~~vliiG~g~~~~~l~~~l~~~~g~~~v~~~~~ 115 (519)
...+++|+|+|....+++..++.. |++++++++.
T Consensus 203 P~~rL~IfGAGhva~ala~~a~~l-g~~V~v~D~R 236 (386)
T 2we8_A 203 PRPRMLVFGAIDFAAAVAQQGAFL-GYRVTVCDAR 236 (386)
T ss_dssp CCCEEEEECCSTHHHHHHHHHHHT-TCEEEEEESC
T ss_pred CCCEEEEECCCHHHHHHHHHHHhC-CCEEEEECCc
Confidence 357999999998777777777655 9999999865
No 461
>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A*
Probab=41.77 E-value=24 Score=33.24 Aligned_cols=34 Identities=29% Similarity=0.287 Sum_probs=26.3
Q ss_pred CccEEEEEeCChhHHHHHHHHHhcCCCcEEEEecC
Q 010065 81 QRVVVLVIGGGGREHALCYALKRSHSCDAVFCAPG 115 (519)
Q Consensus 81 ~~~~vliiG~g~~~~~l~~~l~~~~g~~~v~~~~~ 115 (519)
+.+.|+|||+|......+..+++. |+++++++..
T Consensus 3 ~~yDvvIIG~GpAGl~AA~~la~~-g~~v~liE~~ 36 (314)
T 4a5l_A 3 NIHDVVIIGSGPAAHTAAIYLGRS-SLKPVMYEGF 36 (314)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHT-TCCCEEECCS
T ss_pred CCCcEEEECCCHHHHHHHHHHHHC-CCCEEEEecC
Confidence 457899999997665667777776 8998888643
No 462
>1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex, oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi} SCOP: c.2.1.2 PDB: 1mxf_A*
Probab=41.62 E-value=18 Score=33.73 Aligned_cols=32 Identities=16% Similarity=0.247 Sum_probs=24.0
Q ss_pred ccEEEEEeCC-hhHHHHHHHHHhcCCCcEEEEec
Q 010065 82 RVVVLVIGGG-GREHALCYALKRSHSCDAVFCAP 114 (519)
Q Consensus 82 ~~~vliiG~g-~~~~~l~~~l~~~~g~~~v~~~~ 114 (519)
.++++|+|++ +....++..|.+. |.+++.++.
T Consensus 11 ~k~~lVTGas~gIG~~ia~~l~~~-G~~V~~~~r 43 (276)
T 1mxh_A 11 CPAAVITGGARRIGHSIAVRLHQQ-GFRVVVHYR 43 (276)
T ss_dssp CCEEEETTCSSHHHHHHHHHHHHT-TCEEEEEES
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHC-CCEEEEEeC
Confidence 4678888866 4556788888877 888877754
No 463
>2vvt_A Glutamate racemase; isomerase, peptidoglycan synthesis, cell WALL biogenesis/degradation, cell shape, benzyl purine, MURI inhibitor; HET: I24 DGL; 1.65A {Enterococcus faecalis} PDB: 2jfp_A* 2jfo_A* 2jfu_A 2jfv_A* 2jfw_A*
Probab=41.47 E-value=1.2e+02 Score=28.43 Aligned_cols=41 Identities=17% Similarity=0.198 Sum_probs=26.3
Q ss_pred HHHHHcCCcEEEECCChhhHHHHHHHHHHCCCCeeCCcHHH
Q 010065 141 SFCRKWSVGLVVVGPEAPLVSGLANKLVKAGIPTFGPSSEA 181 (519)
Q Consensus 141 ~~~~~~~id~Vi~g~E~~~~~~~a~~le~~gip~~g~~~~~ 181 (519)
+.+.+.++|+|+..+-......+.+.-+..++|++|.-..+
T Consensus 80 ~~L~~~g~d~IVIACNTas~~~l~~lr~~~~iPVigiiepa 120 (290)
T 2vvt_A 80 DFLLKKRIKMLVIACNTATAVALEEIKAALPIPVVGVILPG 120 (290)
T ss_dssp HHHHTTTCSEEEECCHHHHHHHHHHHHHHCSSCEEESSHHH
T ss_pred HHHHHCCCCEEEEeCcchhHHHHHHHHHhCCCCEEcccHHH
Confidence 33445689999997766642234444567899999844333
No 464
>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}
Probab=41.28 E-value=57 Score=30.21 Aligned_cols=70 Identities=19% Similarity=0.235 Sum_probs=40.6
Q ss_pred ccEEEEEeCC-hhHHHHHHHHHhcCCCcEEEEecCCCCCcC-------C-CCCccccCCCCCCHHHHHHHHHH-----cC
Q 010065 82 RVVVLVIGGG-GREHALCYALKRSHSCDAVFCAPGNAGISN-------S-GDATCIPDLDVLDGDAVISFCRK-----WS 147 (519)
Q Consensus 82 ~~~vliiG~g-~~~~~l~~~l~~~~g~~~v~~~~~~~~~~~-------~-~~~~~v~~~d~~d~~~l~~~~~~-----~~ 147 (519)
.|.++|.|++ |...++++.|.++ |..+++++.+...... . .....+ ..|..|.+.+.+++++ -+
T Consensus 7 gKvalVTGas~GIG~aiA~~la~~-Ga~Vv~~~~~~~~~~~~~~~i~~~g~~~~~~-~~Dvt~~~~v~~~~~~~~~~~G~ 84 (254)
T 4fn4_A 7 NKVVIVTGAGSGIGRAIAKKFALN-DSIVVAVELLEDRLNQIVQELRGMGKEVLGV-KADVSKKKDVEEFVRRTFETYSR 84 (254)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHHTTCCEEEE-ECCTTSHHHHHHHHHHHHHHHSC
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHc-CCEEEEEECCHHHHHHHHHHHHhcCCcEEEE-EccCCCHHHHHHHHHHHHHHcCC
Confidence 4778888866 4556788899877 8888877543111000 0 011112 4566666555554433 25
Q ss_pred CcEEEE
Q 010065 148 VGLVVV 153 (519)
Q Consensus 148 id~Vi~ 153 (519)
+|.++.
T Consensus 85 iDiLVN 90 (254)
T 4fn4_A 85 IDVLCN 90 (254)
T ss_dssp CCEEEE
T ss_pred CCEEEE
Confidence 787776
No 465
>1jtv_A 17 beta-hydroxysteroid dehydrogenase type 1; steroid hormones, alternative binding mode, oxidoreductase; HET: TES; 1.54A {Homo sapiens} SCOP: c.2.1.2 PDB: 1dht_A* 1equ_A* 1bhs_A* 1i5r_A* 1qyv_A* 1qyw_A* 1qyx_A* 3dey_X* 3dhe_A* 3hb4_X* 3hb5_X* 3klp_X* 3km0_A* 1iol_A* 1fds_A* 1fdt_A* 3klm_X* 1fdw_A* 1fdu_A* 1fdv_A* ...
Probab=41.21 E-value=41 Score=32.35 Aligned_cols=70 Identities=23% Similarity=0.276 Sum_probs=43.1
Q ss_pred ccEEEEEeCC-hhHHHHHHHHHhcCCCcEEEEecC--CCC-CcC-C----------CCCccccCCCCCCHHHHHHHHHHc
Q 010065 82 RVVVLVIGGG-GREHALCYALKRSHSCDAVFCAPG--NAG-ISN-S----------GDATCIPDLDVLDGDAVISFCRKW 146 (519)
Q Consensus 82 ~~~vliiG~g-~~~~~l~~~l~~~~g~~~v~~~~~--~~~-~~~-~----------~~~~~v~~~d~~d~~~l~~~~~~~ 146 (519)
.++++|+|++ +....++..|.+. |.+++.+... +.. ... . .....+ ..|..|.+.+.+++++.
T Consensus 2 ~k~vlVTGas~GIG~ala~~L~~~-G~~v~~v~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~Dv~d~~~v~~~~~~~ 79 (327)
T 1jtv_A 2 RTVVLITGCSSGIGLHLAVRLASD-PSQSFKVYATLRDLKTQGRLWEAARALACPPGSLETL-QLDVRDSKSVAAARERV 79 (327)
T ss_dssp CEEEEESCCSSHHHHHHHHHHHTC-TTCCEEEEEEESCGGGTHHHHHHHHHTTCCTTSEEEE-ECCTTCHHHHHHHHHTC
T ss_pred CCEEEEECCCCHHHHHHHHHHHHC-CCceEEEEeecCcHHHHHHHHHHhhhccCCCCceEEE-EecCCCHHHHHHHHHHH
Confidence 3678888866 4556788888877 8776655422 110 000 0 011222 57888888887777653
Q ss_pred ---CCcEEEE
Q 010065 147 ---SVGLVVV 153 (519)
Q Consensus 147 ---~id~Vi~ 153 (519)
++|++|.
T Consensus 80 ~~g~iD~lVn 89 (327)
T 1jtv_A 80 TEGRVDVLVC 89 (327)
T ss_dssp TTSCCSEEEE
T ss_pred hcCCCCEEEE
Confidence 5899887
No 466
>3u7q_A Nitrogenase molybdenum-iron protein alpha chain; multiple rossmann fold domains, reductase, nitrogen fixing, oxidoreductase; HET: HCA ICS 1CL CLF; 1.00A {Azotobacter vinelandii} SCOP: c.92.2.3 PDB: 1g21_A* 1g20_A* 1fp4_A* 1m1n_A* 1l5h_A* 1m1y_A* 1m34_A* 1n2c_A* 2afh_A* 2afi_A* 2afk_A* 2min_A* 3min_A* 3k1a_A* 1h1l_A* 1qgu_A* 1qh1_A* 1qh8_A*
Probab=41.21 E-value=43 Score=34.49 Aligned_cols=86 Identities=19% Similarity=0.136 Sum_probs=54.7
Q ss_pred ccEEEEEeCChhHHHHHHHHHhcCCCcEEEEecCCCCCc---CC-C--CCccccCCCCCCHHHHHHHHHHcCCcEEEECC
Q 010065 82 RVVVLVIGGGGREHALCYALKRSHSCDAVFCAPGNAGIS---NS-G--DATCIPDLDVLDGDAVISFCRKWSVGLVVVGP 155 (519)
Q Consensus 82 ~~~vliiG~g~~~~~l~~~l~~~~g~~~v~~~~~~~~~~---~~-~--~~~~v~~~d~~d~~~l~~~~~~~~id~Vi~g~ 155 (519)
.++|.|.|.+.+...++..|. +.|.+++.+........ .. . ....+ .++..|...+.+++++.++|+++.+.
T Consensus 348 GKrv~i~g~~~~~~~la~~L~-ElGm~vv~~gt~~~~~~d~~~l~~~~~~~~~-i~~~~d~~el~~~i~~~~pDL~ig~~ 425 (492)
T 3u7q_A 348 GKRVMLYIGGLRPRHVIGAYE-DLGMEVVGTGYEFAHNDDYDRTMKEMGDSTL-LYDDVTGYEFEEFVKRIKPDLIGSGI 425 (492)
T ss_dssp TCEEEECBSSSHHHHTHHHHH-TTTCEEEEEEESSCCHHHHHHHHTTSCTTCE-EEESCBHHHHHHHHHHHCCSEEEECH
T ss_pred CCEEEEECCCchHHHHHHHHH-HCCCEEEEEeCCCCCHHHHHHHHHhCCCCcE-EEcCCCHHHHHHHHHhcCCcEEEeCc
Confidence 478999888877777888775 45998877532211000 00 0 00111 23445788899999999999999753
Q ss_pred ChhhHHHHHHHHHHCCCCee
Q 010065 156 EAPLVSGLANKLVKAGIPTF 175 (519)
Q Consensus 156 E~~~~~~~a~~le~~gip~~ 175 (519)
-. ....+++|||++
T Consensus 426 ~~------~~ia~k~gIP~~ 439 (492)
T 3u7q_A 426 KE------KFIFQKMGIPFR 439 (492)
T ss_dssp HH------HHHHHHTTCCEE
T ss_pred ch------hHHHHHcCCCEE
Confidence 22 233678899986
No 467
>1ryi_A Glycine oxidase; flavoprotein, protein-inhibitor complex, oxidoreductase; HET: FAD; 1.80A {Bacillus subtilis} SCOP: c.3.1.2 d.16.1.3 PDB: 3if9_A* 1ng4_A* 1ng3_A*
Probab=41.19 E-value=29 Score=33.68 Aligned_cols=35 Identities=26% Similarity=0.456 Sum_probs=28.7
Q ss_pred CccEEEEEeCChhHHHHHHHHHhcCCCcEEEEecCC
Q 010065 81 QRVVVLVIGGGGREHALCYALKRSHSCDAVFCAPGN 116 (519)
Q Consensus 81 ~~~~vliiG~g~~~~~l~~~l~~~~g~~~v~~~~~~ 116 (519)
..++|+|||+|......++.|++. |+++++++...
T Consensus 16 ~~~dvvIIGgG~~Gl~~A~~La~~-G~~V~llE~~~ 50 (382)
T 1ryi_A 16 RHYEAVVIGGGIIGSAIAYYLAKE-NKNTALFESGT 50 (382)
T ss_dssp SEEEEEEECCSHHHHHHHHHHHHT-TCCEEEECSSS
T ss_pred CCCCEEEECcCHHHHHHHHHHHhC-CCcEEEEeCCC
Confidence 357999999997767788999887 99999987553
No 468
>4gsl_A Ubiquitin-like modifier-activating enzyme ATG7; ubiquitin-like protein activation enzyme, ubiquitin-like Pro transfer enzyme, protein transport; 2.70A {Saccharomyces cerevisiae} PDB: 3vh2_A 4gsk_A 3vh1_A
Probab=41.16 E-value=1.1e+02 Score=32.39 Aligned_cols=70 Identities=13% Similarity=0.050 Sum_probs=40.3
Q ss_pred ccEEEEEeCChhHHHHHHHHHhcCCCcEEEEecCC-CCCcCCCCCccc--cCCCCCCHHHHHHHHHHcCCcEEE
Q 010065 82 RVVVLVIGGGGREHALCYALKRSHSCDAVFCAPGN-AGISNSGDATCI--PDLDVLDGDAVISFCRKWSVGLVV 152 (519)
Q Consensus 82 ~~~vliiG~g~~~~~l~~~l~~~~g~~~v~~~~~~-~~~~~~~~~~~v--~~~d~~d~~~l~~~~~~~~id~Vi 152 (519)
..+|+|+|.|+..-+++..|... |+..+.+.+.+ ............ ..+.....+.+.+.+++.++++-+
T Consensus 326 ~arVLIVGaGGLGs~vA~~La~a-GVG~ItLvD~D~Ve~SNL~RQ~L~~~~dIG~~KAeaaa~~L~~iNP~V~v 398 (615)
T 4gsl_A 326 NTKVLLLGAGTLGCYVSRALIAW-GVRKITFVDNGTVSYSNPVRQALYNFEDCGKPKAELAAASLKRIFPLMDA 398 (615)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHT-TCCEEEEECCCBCCTTGGGTSTTCCGGGTTSBHHHHHHHHHHHHCTTCEE
T ss_pred CCeEEEECCCHHHHHHHHHHHHc-CCCEEEEEcCCCCcccCcccccCCChhhcChHHHHHHHHHHHhhCCCcEE
Confidence 46999999999888889999887 88877664332 111111100000 011222355666666666665544
No 469
>1r6d_A TDP-glucose-4,6-dehydratase; rossmann fold, short-chain dehydrogenase/reductase, lyase; HET: NAD DAU; 1.35A {Streptomyces venezuelae} SCOP: c.2.1.2 PDB: 1r66_A*
Probab=41.11 E-value=68 Score=30.38 Aligned_cols=68 Identities=15% Similarity=0.078 Sum_probs=41.2
Q ss_pred cEEEEEeCC-hhHHHHHHHHHhc-C-C---CcEEEEecCCC--CCcC---C---CCCccccCCCCCCHHHHHHHHHHcCC
Q 010065 83 VVVLVIGGG-GREHALCYALKRS-H-S---CDAVFCAPGNA--GISN---S---GDATCIPDLDVLDGDAVISFCRKWSV 148 (519)
Q Consensus 83 ~~vliiG~g-~~~~~l~~~l~~~-~-g---~~~v~~~~~~~--~~~~---~---~~~~~v~~~d~~d~~~l~~~~~~~~i 148 (519)
|+|||+|+. .....++..|.+. . | ++++.++.... .... . .....+ ..|..|.+.+.+++ .++
T Consensus 1 M~vlVTGatG~iG~~l~~~L~~~~~~g~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~-~~Dl~d~~~~~~~~--~~~ 77 (337)
T 1r6d_A 1 MRLLVTGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSLTYAGNRANLAPVDADPRLRFV-HGDIRDAGLLAREL--RGV 77 (337)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTSCTTSCCSEEEEEECCCTTCCGGGGGGGTTCTTEEEE-ECCTTCHHHHHHHT--TTC
T ss_pred CeEEEECCccHHHHHHHHHHHhhhcCCCCceEEEEEECCCccCchhhhhhcccCCCeEEE-EcCCCCHHHHHHHh--cCC
Confidence 589999965 4556678888763 2 5 77776653211 1110 0 011122 46888887777666 578
Q ss_pred cEEEE
Q 010065 149 GLVVV 153 (519)
Q Consensus 149 d~Vi~ 153 (519)
|+||-
T Consensus 78 d~Vih 82 (337)
T 1r6d_A 78 DAIVH 82 (337)
T ss_dssp CEEEE
T ss_pred CEEEE
Confidence 99987
No 470
>3ohs_X Trans-1,2-dihydrobenzene-1,2-DIOL dehydrogenase; dimeric dihydrodiol dehydrogenase, MDD, oxidoreductase; 1.90A {Macaca fascicularis} PDB: 2o48_X 2poq_X* 2o4u_X
Probab=40.73 E-value=14 Score=35.86 Aligned_cols=142 Identities=13% Similarity=0.061 Sum_probs=68.8
Q ss_pred ccEEEEEeCChhHHHHHHHHHhcCC--CcEEEEecCCCCCcCCCCCccccCC--CCCCHHHHHHHHHHcCCcEEEECCCh
Q 010065 82 RVVVLVIGGGGREHALCYALKRSHS--CDAVFCAPGNAGISNSGDATCIPDL--DVLDGDAVISFCRKWSVGLVVVGPEA 157 (519)
Q Consensus 82 ~~~vliiG~g~~~~~l~~~l~~~~g--~~~v~~~~~~~~~~~~~~~~~v~~~--d~~d~~~l~~~~~~~~id~Vi~g~E~ 157 (519)
++++.|||.|......+..+++..+ ++++.+.+.+...... ..... .+ -..+.+++ +...++|+|+...-.
T Consensus 2 ~~rigiiG~G~ig~~~~~~l~~~~~~~~~l~av~d~~~~~a~~-~a~~~-~~~~~~~~~~~l---l~~~~vD~V~i~tp~ 76 (334)
T 3ohs_X 2 ALRWGIVSVGLISSDFTAVLQTLPRSEHQVVAVAARDLSRAKE-FAQKH-DIPKAYGSYEEL---AKDPNVEVAYVGTQH 76 (334)
T ss_dssp CEEEEEECCSHHHHHHHHHHTTSCTTTEEEEEEECSSHHHHHH-HHHHH-TCSCEESSHHHH---HHCTTCCEEEECCCG
T ss_pred ccEEEEECchHHHHHHHHHHHhCCCCCeEEEEEEcCCHHHHHH-HHHHc-CCCcccCCHHHH---hcCCCCCEEEECCCc
Confidence 4689999999655555666665432 3455443322111000 00011 11 12344544 445679999986444
Q ss_pred hhHHHHHHHHHHCCCCeeCCcHHHHHHhcCHHHHHHHHHHcCCCCCCeee---cCCHHHHHHHHH--HhCCCEEEEe
Q 010065 158 PLVSGLANKLVKAGIPTFGPSSEAAALEGSKNFMKNLCDKYGIPTAKYKT---FTDPNAAKQYIQ--EEGAPIVVKA 229 (519)
Q Consensus 158 ~~~~~~a~~le~~gip~~g~~~~~~~~~~dK~~~k~~l~~~Gi~~p~~~~---v~~~~~~~~~~~--~~g~P~VvKP 229 (519)
..-..++..+-+.|.+++.-.|-+... .+=..+.+++++.|+..-.... ......+.+.++ .+|-+..+.-
T Consensus 77 ~~H~~~~~~al~~GkhVl~EKP~a~~~-~e~~~l~~~a~~~~~~~~v~~~~r~~p~~~~~k~~i~~g~iG~i~~v~~ 152 (334)
T 3ohs_X 77 PQHKAAVMLCLAAGKAVLCEKPMGVNA-AEVREMVTEARSRGLFLMEAIWTRFFPASEALRSVLAQGTLGDLRVARA 152 (334)
T ss_dssp GGHHHHHHHHHHTTCEEEEESSSSSSH-HHHHHHHHHHHHTTCCEEEECGGGGSHHHHHHHHHHHHTTTCSEEEEEE
T ss_pred HHHHHHHHHHHhcCCEEEEECCCCCCH-HHHHHHHHHHHHhCCEEEEEEhHhcCHHHHHHHHHHhcCCCCCeEEEEE
Confidence 443345555666788776322222111 1112344566777765422111 112234555553 3565555544
No 471
>1u7z_A Coenzyme A biosynthesis bifunctional protein coabc; ligase; HET: PMT; 2.30A {Escherichia coli} SCOP: c.72.3.1 PDB: 1u7w_A* 1u7u_A* 1u80_A*
Probab=40.69 E-value=75 Score=28.92 Aligned_cols=58 Identities=10% Similarity=0.142 Sum_probs=34.2
Q ss_pred ChhHHHHHHHHHhcCCCcEEEEecCCCCCcCCCCCccccCCCCCCHHHHHHHHHH--cCCcEEEE
Q 010065 91 GGREHALCYALKRSHSCDAVFCAPGNAGISNSGDATCIPDLDVLDGDAVISFCRK--WSVGLVVV 153 (519)
Q Consensus 91 g~~~~~l~~~l~~~~g~~~v~~~~~~~~~~~~~~~~~v~~~d~~d~~~l~~~~~~--~~id~Vi~ 153 (519)
|+...+++.++.+. |.+++++.... .... ...+..+|..+.+++.+.+.+ .++|+++.
T Consensus 34 g~iG~aiA~~~~~~-Ga~V~l~~~~~-~l~~---~~g~~~~dv~~~~~~~~~v~~~~~~~Dili~ 93 (226)
T 1u7z_A 34 GKMGFAIAAAAARR-GANVTLVSGPV-SLPT---PPFVKRVDVMTALEMEAAVNASVQQQNIFIG 93 (226)
T ss_dssp SHHHHHHHHHHHHT-TCEEEEEECSC-CCCC---CTTEEEEECCSHHHHHHHHHHHGGGCSEEEE
T ss_pred cHHHHHHHHHHHHC-CCEEEEEECCc-cccc---CCCCeEEccCcHHHHHHHHHHhcCCCCEEEE
Confidence 55678889999887 99988874321 1110 001112455666666665544 25888886
No 472
>2jfn_A Glutamate racemase; cell WALL, isomerase, cell shape, UDP- murnac-Ala, peptidoglycan biosynthesis, peptidoglycan synthesis; HET: GLU UMA; 1.9A {Escherichia coli}
Probab=40.62 E-value=1e+02 Score=28.94 Aligned_cols=96 Identities=16% Similarity=0.140 Sum_probs=47.6
Q ss_pred CccEEEEEeCChhHHHHHHHHHhcC-CCcEEEEecCCCCCcCCCCCccccCCCCCCHHHHHHHH-HHcCCcEEEECCChh
Q 010065 81 QRVVVLVIGGGGREHALCYALKRSH-SCDAVFCAPGNAGISNSGDATCIPDLDVLDGDAVISFC-RKWSVGLVVVGPEAP 158 (519)
Q Consensus 81 ~~~~vliiG~g~~~~~l~~~l~~~~-g~~~v~~~~~~~~~~~~~~~~~v~~~d~~d~~~l~~~~-~~~~id~Vi~g~E~~ 158 (519)
.+++|+|+.+|--...+.+.+.+.. +...+++.+...........+.+. .-...+.+.. ++.++|+|+..+-..
T Consensus 20 ~~~~IgvfDSGvGGltv~~~i~~~lP~~~~iy~~D~~~~PyG~~s~~~i~----~~~~~i~~~ll~~~g~d~IviaCNTa 95 (285)
T 2jfn_A 20 PRPTVLVFDSGVGGLSVYDEIRHLLPDLHYIYAFDNVAFPYGEKSEAFIV----ERVVAIVTAVQERYPLALAVVACNTA 95 (285)
T ss_dssp CEEEEEEEESSSTHHHHHHHHHHHSTTSEEEEEECTTTCCTTTSCHHHHH----HHHHHHHHHHHHHSCCSEEEECCHHH
T ss_pred CCCcEEEEeCCccHHHHHHHHHHhCCCCCeEEeeccCCCCCccCCHHHHH----HHHHHHHHHHHHhCCCCEEEEECccc
Confidence 3467999977743344556665543 444555433211000000000010 0012233333 346899999977665
Q ss_pred hHHHHHHHHHHCCCCeeCCcHH
Q 010065 159 LVSGLANKLVKAGIPTFGPSSE 180 (519)
Q Consensus 159 ~~~~~a~~le~~gip~~g~~~~ 180 (519)
....+.+.-+..++|++|..+.
T Consensus 96 s~~~l~~lr~~~~iPVigi~~a 117 (285)
T 2jfn_A 96 STVSLPALREKFDFPVVGVVPA 117 (285)
T ss_dssp HHHHHHHHHHHCSSCEECCCCC
T ss_pred cHHHHHHHHHhCCCCEEehHHH
Confidence 4223334446789999986543
No 473
>2oho_A Glutamate racemase; isomerase; 2.25A {Streptococcus pyogenes m1 gas} PDB: 2ohg_A 2ohv_A*
Probab=40.61 E-value=1.7e+02 Score=27.09 Aligned_cols=38 Identities=16% Similarity=0.213 Sum_probs=24.3
Q ss_pred HHHHHcCCcEEEECCChhhHHHHHHHHHHCCCCeeCCc
Q 010065 141 SFCRKWSVGLVVVGPEAPLVSGLANKLVKAGIPTFGPS 178 (519)
Q Consensus 141 ~~~~~~~id~Vi~g~E~~~~~~~a~~le~~gip~~g~~ 178 (519)
+.+.+.++|+|+..+-......+.+.-+..++|++|.-
T Consensus 68 ~~L~~~g~d~iviaCNTas~~~l~~lr~~~~iPvigi~ 105 (273)
T 2oho_A 68 NFLLTQNVKMIVFACNTATAVAWEEVKAALDIPVLGVV 105 (273)
T ss_dssp HHHHTTTCSEEEECCHHHHHHHHHHHHHHCSSCEEESH
T ss_pred HHHHHCCCCEEEEeCchHhHHHHHHHHHhCCCCEEecc
Confidence 33445689999997666542223333457899999753
No 474
>2a35_A Hypothetical protein PA4017; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.2.1.2
Probab=40.52 E-value=8.9 Score=33.99 Aligned_cols=31 Identities=16% Similarity=0.050 Sum_probs=22.2
Q ss_pred ccEEEEEeCC-hhHHHHHHHHHhcCCC--cEEEEe
Q 010065 82 RVVVLVIGGG-GREHALCYALKRSHSC--DAVFCA 113 (519)
Q Consensus 82 ~~~vliiG~g-~~~~~l~~~l~~~~g~--~~v~~~ 113 (519)
+++|+|+|+. +....++..|.+. |. +++.++
T Consensus 5 ~~~vlVtGatG~iG~~l~~~l~~~-g~~~~V~~~~ 38 (215)
T 2a35_A 5 PKRVLLAGATGLTGEHLLDRILSE-PTLAKVIAPA 38 (215)
T ss_dssp CCEEEEECTTSHHHHHHHHHHHHC-TTCCEEECCB
T ss_pred CceEEEECCCcHHHHHHHHHHHhC-CCCCeEEEEe
Confidence 4789999965 4556788888877 66 665554
No 475
>3dme_A Conserved exported protein; structural genomics, PSI-2, PROT structure initiative, northeast structural genomics consort NESG; HET: FAD TLA; 1.70A {Bordetella pertussis}
Probab=40.31 E-value=27 Score=33.53 Aligned_cols=33 Identities=21% Similarity=0.311 Sum_probs=27.6
Q ss_pred ccEEEEEeCChhHHHHHHHHHhcCCCcEEEEecC
Q 010065 82 RVVVLVIGGGGREHALCYALKRSHSCDAVFCAPG 115 (519)
Q Consensus 82 ~~~vliiG~g~~~~~l~~~l~~~~g~~~v~~~~~ 115 (519)
.++|+|||+|......++.|++. |+++++++..
T Consensus 4 ~~dvvIIG~G~~Gl~~A~~La~~-G~~V~vlE~~ 36 (369)
T 3dme_A 4 DIDCIVIGAGVVGLAIARALAAG-GHEVLVAEAA 36 (369)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHT-TCCEEEECSS
T ss_pred cCCEEEECCCHHHHHHHHHHHhC-CCeEEEEeCC
Confidence 46899999997667788999887 9999998765
No 476
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=39.99 E-value=31 Score=32.82 Aligned_cols=34 Identities=18% Similarity=0.223 Sum_probs=27.1
Q ss_pred CccEEEEEeCChhHHHHHHHHHhcCCCcEEEEecC
Q 010065 81 QRVVVLVIGGGGREHALCYALKRSHSCDAVFCAPG 115 (519)
Q Consensus 81 ~~~~vliiG~g~~~~~l~~~l~~~~g~~~v~~~~~ 115 (519)
.+++|+|||+|......+..|++. |+++++++..
T Consensus 4 ~~~~vvIIG~G~aGl~aA~~l~~~-g~~v~lie~~ 37 (335)
T 2zbw_A 4 DHTDVLIVGAGPTGLFAGFYVGMR-GLSFRFVDPL 37 (335)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHT-TCCEEEEESS
T ss_pred CcCcEEEECCCHHHHHHHHHHHhC-CCCEEEEeCC
Confidence 357899999997666678888776 8998888754
No 477
>3aek_A Light-independent protochlorophyllide reductase S; iron/sulfur cluster, oxidoreductase, bacteriochlorophyll biosynthesis; HET: PMR; 2.30A {Rhodobacter capsulatus} PDB: 3aeq_A* 3aes_A* 3aer_A* 3aet_A 3aeu_A
Probab=39.91 E-value=97 Score=31.18 Aligned_cols=86 Identities=19% Similarity=0.035 Sum_probs=53.2
Q ss_pred ccEEEEEeCChhHHHHHHHHHhcCCCcEEEEecCCCC-C------cCCCCCccccCCCCCCHHHHHHHHHHcCCcEEEEC
Q 010065 82 RVVVLVIGGGGREHALCYALKRSHSCDAVFCAPGNAG-I------SNSGDATCIPDLDVLDGDAVISFCRKWSVGLVVVG 154 (519)
Q Consensus 82 ~~~vliiG~g~~~~~l~~~l~~~~g~~~v~~~~~~~~-~------~~~~~~~~v~~~d~~d~~~l~~~~~~~~id~Vi~g 154 (519)
.+++.|.|.+.....+++.|.++.|.+++.+...... . ........ ..+..|...+.+++++.++|+++.+
T Consensus 307 Gkrv~i~g~~~~~~~l~~~L~~elG~~vv~~~~~~~~~~~~~~~l~~l~~~~~--v~~~~d~~e~~~~i~~~~pDliig~ 384 (437)
T 3aek_A 307 GKSLFMFPDSQLEIPLARFLARECGMKTTEIATPFLHKAIMAPDLALLPSNTA--LTEGQDLEAQLDRHEAINPDLTVCG 384 (437)
T ss_dssp TCEEEECSSSSCHHHHHHHHHHTTCCEEEEEEESCCCHHHHHHHHTTSBTTCE--EEEECCHHHHHHHHHHHCCSEEEEC
T ss_pred CCEEEEEcCchHHHHHHHHHHHHcCCEEEEEEecCCCHHHHHHHHHhcCCCCE--EEeCCCHHHHHHHHhccCCCEEEeC
Confidence 4799999988888888888855669998876432111 0 00000001 1233467777788999999999975
Q ss_pred CChhhHHHHHHHHHHCCCCee
Q 010065 155 PEAPLVSGLANKLVKAGIPTF 175 (519)
Q Consensus 155 ~E~~~~~~~a~~le~~gip~~ 175 (519)
... ...+.+.|+|+.
T Consensus 385 ~~~------~~p~~~~G~P~~ 399 (437)
T 3aek_A 385 LGL------ANPLEAKGHATK 399 (437)
T ss_dssp HHH------HHHHHTTTCCEE
T ss_pred Ccc------ccHHHHCCCCEE
Confidence 221 223566788854
No 478
>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A
Probab=39.80 E-value=21 Score=32.39 Aligned_cols=88 Identities=13% Similarity=-0.010 Sum_probs=47.5
Q ss_pred CccEEEEEeCChhHHHHHHHHHhcCCCcEEEEecCCCCCcCC-CCCccccCCCCCCHHHHHHHHHHcCCcEEEEC-CChh
Q 010065 81 QRVVVLVIGGGGREHALCYALKRSHSCDAVFCAPGNAGISNS-GDATCIPDLDVLDGDAVISFCRKWSVGLVVVG-PEAP 158 (519)
Q Consensus 81 ~~~~vliiG~g~~~~~l~~~l~~~~g~~~v~~~~~~~~~~~~-~~~~~v~~~d~~d~~~l~~~~~~~~id~Vi~g-~E~~ 158 (519)
.+++++|+|.|.....++..|.+. |+ +++++.+....... .....+ ..|..+.+.+.+. .-.+.|.|+.. +.+.
T Consensus 8 ~~~~viI~G~G~~G~~la~~L~~~-g~-v~vid~~~~~~~~~~~~~~~i-~gd~~~~~~l~~a-~i~~ad~vi~~~~~d~ 83 (234)
T 2aef_A 8 KSRHVVICGWSESTLECLRELRGS-EV-FVLAEDENVRKKVLRSGANFV-HGDPTRVSDLEKA-NVRGARAVIVDLESDS 83 (234)
T ss_dssp --CEEEEESCCHHHHHHHHHSTTS-EE-EEEESCGGGHHHHHHTTCEEE-ESCTTCHHHHHHT-TCTTCSEEEECCSCHH
T ss_pred CCCEEEEECCChHHHHHHHHHHhC-Ce-EEEEECCHHHHHHHhcCCeEE-EcCCCCHHHHHhc-CcchhcEEEEcCCCcH
Confidence 357899999997666778877665 77 66665331111000 111223 4577776655432 22367888874 4443
Q ss_pred hHHHHHHHHHHCCC
Q 010065 159 LVSGLANKLVKAGI 172 (519)
Q Consensus 159 ~~~~~a~~le~~gi 172 (519)
....++..+..++.
T Consensus 84 ~n~~~~~~a~~~~~ 97 (234)
T 2aef_A 84 ETIHCILGIRKIDE 97 (234)
T ss_dssp HHHHHHHHHHHHCS
T ss_pred HHHHHHHHHHHHCC
Confidence 33334444555553
No 479
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=39.32 E-value=29 Score=32.58 Aligned_cols=33 Identities=12% Similarity=0.128 Sum_probs=27.7
Q ss_pred ccEEEEEeCChhHHHHHHHHHhcCCCcEEEEecC
Q 010065 82 RVVVLVIGGGGREHALCYALKRSHSCDAVFCAPG 115 (519)
Q Consensus 82 ~~~vliiG~g~~~~~l~~~l~~~~g~~~v~~~~~ 115 (519)
+++|+|||+|......+..|++. |+++++++.+
T Consensus 15 ~~~vvIIG~G~aGl~aA~~l~~~-g~~v~lie~~ 47 (323)
T 3f8d_A 15 KFDVIIVGLGPAAYGAALYSARY-MLKTLVIGET 47 (323)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHT-TCCEEEEESS
T ss_pred ccCEEEECccHHHHHHHHHHHHC-CCcEEEEecc
Confidence 47999999997777778888887 8999888765
No 480
>2oln_A NIKD protein; flavoprotein, rossmann fold, oxidoreductase; HET: FAD; 1.15A {Streptomyces tendae} PDB: 2olo_A* 3hzl_A* 2q6u_A*
Probab=39.32 E-value=32 Score=33.72 Aligned_cols=34 Identities=18% Similarity=0.253 Sum_probs=28.1
Q ss_pred ccEEEEEeCChhHHHHHHHHHhcCCCcEEEEecCC
Q 010065 82 RVVVLVIGGGGREHALCYALKRSHSCDAVFCAPGN 116 (519)
Q Consensus 82 ~~~vliiG~g~~~~~l~~~l~~~~g~~~v~~~~~~ 116 (519)
...|+|||+|......++.|++. |.++++++...
T Consensus 4 ~~DVvIIGaG~~Gl~~A~~La~~-G~~V~vlE~~~ 37 (397)
T 2oln_A 4 SYDVVVVGGGPVGLATAWQVAER-GHRVLVLERHT 37 (397)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHT-TCCEEEEESSC
T ss_pred cCCEEEECCCHHHHHHHHHHHHC-CCeEEEEeCCC
Confidence 36899999997767788999887 99999987654
No 481
>2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain, structura genomics consortium, SGC, oxidoreductase; 1.80A {Homo sapiens}
Probab=39.18 E-value=25 Score=32.42 Aligned_cols=71 Identities=14% Similarity=0.163 Sum_probs=41.9
Q ss_pred ccEEEEEeCC-hhHHHHHHHHHhcCCCcEEEEecCCCCCcCC--------CCCccccCCCCCCHHHHHHHHHH------c
Q 010065 82 RVVVLVIGGG-GREHALCYALKRSHSCDAVFCAPGNAGISNS--------GDATCIPDLDVLDGDAVISFCRK------W 146 (519)
Q Consensus 82 ~~~vliiG~g-~~~~~l~~~l~~~~g~~~v~~~~~~~~~~~~--------~~~~~v~~~d~~d~~~l~~~~~~------~ 146 (519)
.++++|+|++ +....+++.|.+. |.+++.++.+....... .....+ ..|..|.+.+.+++++ .
T Consensus 5 ~k~vlVTGas~gIG~~ia~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~-~~Dv~~~~~v~~~~~~~~~~~~g 82 (260)
T 2qq5_A 5 GQVCVVTGASRGIGRGIALQLCKA-GATVYITGRHLDTLRVVAQEAQSLGGQCVPV-VCDSSQESEVRSLFEQVDREQQG 82 (260)
T ss_dssp TCEEEESSTTSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHHHSSEEEEE-ECCTTSHHHHHHHHHHHHHHHTT
T ss_pred CCEEEEeCCCchHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHHHHcCCceEEE-ECCCCCHHHHHHHHHHHHHhcCC
Confidence 4678888866 4556788888887 88877765331100000 011122 4677776666555443 2
Q ss_pred CCcEEEEC
Q 010065 147 SVGLVVVG 154 (519)
Q Consensus 147 ~id~Vi~g 154 (519)
++|+++..
T Consensus 83 ~id~lvnn 90 (260)
T 2qq5_A 83 RLDVLVNN 90 (260)
T ss_dssp CCCEEEEC
T ss_pred CceEEEEC
Confidence 68988874
No 482
>3ia7_A CALG4; glycosysltransferase, calicheamicin, enediyne, transf; 1.91A {Micromonospora echinospora}
Probab=39.13 E-value=28 Score=33.95 Aligned_cols=31 Identities=16% Similarity=0.190 Sum_probs=21.9
Q ss_pred cEEEEEeCChhH-----HHHHHHHHhcCCCcEEEEec
Q 010065 83 VVVLVIGGGGRE-----HALCYALKRSHSCDAVFCAP 114 (519)
Q Consensus 83 ~~vliiG~g~~~-----~~l~~~l~~~~g~~~v~~~~ 114 (519)
++|+++..++.. .++++.|++. |+++.++.+
T Consensus 5 ~~il~~~~~~~Ghv~~~~~La~~L~~~-GheV~v~~~ 40 (402)
T 3ia7_A 5 RHILFANVQGHGHVYPSLGLVSELARR-GHRITYVTT 40 (402)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHHHHHT-TCEEEEEEC
T ss_pred CEEEEEeCCCCcccccHHHHHHHHHhC-CCEEEEEcC
Confidence 478877655432 5678888877 898888763
No 483
>3tqi_A GMP synthase [glutamine-hydrolyzing]; ligase; 2.84A {Coxiella burnetii}
Probab=38.97 E-value=11 Score=39.50 Aligned_cols=21 Identities=14% Similarity=0.229 Sum_probs=17.5
Q ss_pred CCceeccCCceeEEeccCCCc
Q 010065 33 NNLRFSVGPNFSISFNPQGSK 53 (519)
Q Consensus 33 ~~~~~~~~~~~~~~~~~~~~~ 53 (519)
++++|...|.+.|||||+...
T Consensus 169 ~ai~~~~~~~~GvQFHPE~~~ 189 (527)
T 3tqi_A 169 AAMADFKRRFFGLQFHPEVTH 189 (527)
T ss_dssp EEEECSSSCEEEESBCSSSTT
T ss_pred EEEEcCCCCEEEEEecccccc
Confidence 466777899999999999863
No 484
>3u7q_B Nitrogenase molybdenum-iron protein beta chain; multiple rossmann fold domains, reductase, nitrogen fixing, oxidoreductase; HET: HCA ICS 1CL CLF; 1.00A {Azotobacter vinelandii} SCOP: c.92.2.3 PDB: 1fp4_B* 1g21_B* 1g20_B* 1m1n_B* 1l5h_B* 1m1y_B* 1m34_B* 1n2c_B* 2afh_B* 2afi_B* 2afk_B* 2min_B* 3k1a_B* 3min_B*
Probab=38.93 E-value=1.1e+02 Score=31.56 Aligned_cols=93 Identities=11% Similarity=-0.053 Sum_probs=53.9
Q ss_pred ccEEEEEeCChhHHHHHHHHHhcCCCcEEEEecCCCCCc-------CCCC-Cc--cccCCCCCCHHHHHHHHHHcCCcEE
Q 010065 82 RVVVLVIGGGGREHALCYALKRSHSCDAVFCAPGNAGIS-------NSGD-AT--CIPDLDVLDGDAVISFCRKWSVGLV 151 (519)
Q Consensus 82 ~~~vliiG~g~~~~~l~~~l~~~~g~~~v~~~~~~~~~~-------~~~~-~~--~v~~~d~~d~~~l~~~~~~~~id~V 151 (519)
.++|.|.|.......+++.|.+ .|.+++.+...+.... .... .. ....++..|...+.+++++.++|++
T Consensus 364 GKrvaI~gd~~~~~~la~fL~e-lGm~vv~v~~~~~~~~~~~~~~~~l~~~~~~~~~~v~~~~D~~~l~~~i~~~~pDLl 442 (523)
T 3u7q_B 364 GKRFALWGDPDFVMGLVKFLLE-LGCEPVHILCHNGNKRWKKAVDAILAASPYGKNATVYIGKDLWHLRSLVFTDKPDFM 442 (523)
T ss_dssp TCEEEEECSHHHHHHHHHHHHH-TTCEEEEEEETTCCHHHHHHHHHHHHTSGGGTTCEEEESCCHHHHHHHHHHTCCSEE
T ss_pred CCEEEEECCchHHHHHHHHHHH-cCCEEEEEEeCCCCHHHHHHHHHHHhhccCCCCcEEEECCCHHHHHHHHHhcCCCEE
Confidence 3789999866666778888875 5998877643221110 0000 00 0001234578888899999999999
Q ss_pred EECCChhhHHH-HHHHHHHCCCCee
Q 010065 152 VVGPEAPLVSG-LANKLVKAGIPTF 175 (519)
Q Consensus 152 i~g~E~~~~~~-~a~~le~~gip~~ 175 (519)
+.++-...++. +.....++|+|++
T Consensus 443 ig~s~~k~~a~~~~~~~~~~giP~i 467 (523)
T 3u7q_B 443 IGNSYGKFIQRDTLHKGKEFEVPLI 467 (523)
T ss_dssp EECTTHHHHHHHHHHHCGGGCCCEE
T ss_pred EECccHHHHHHHhhcccccCCCceE
Confidence 98654432211 1111245588875
No 485
>2ekp_A 2-deoxy-D-gluconate 3-dehydrogenase; structural genomics, NPPSFA, nation project on protein structural and functional analyses; HET: NAD; 1.15A {Thermus thermophilus} PDB: 1x1e_A* 2ekq_A
Probab=38.79 E-value=21 Score=32.49 Aligned_cols=69 Identities=19% Similarity=0.177 Sum_probs=38.0
Q ss_pred cEEEEEeCC-hhHHHHHHHHHhcCCCcEEEEecCCCCCcCCCCCccccCCCCC--CHHHHHHHHH-H-cCCcEEEE
Q 010065 83 VVVLVIGGG-GREHALCYALKRSHSCDAVFCAPGNAGISNSGDATCIPDLDVL--DGDAVISFCR-K-WSVGLVVV 153 (519)
Q Consensus 83 ~~vliiG~g-~~~~~l~~~l~~~~g~~~v~~~~~~~~~~~~~~~~~v~~~d~~--d~~~l~~~~~-~-~~id~Vi~ 153 (519)
++++|+|++ +....++..|.+. |++++.++.+............+ ..|.. +.+.+.+.+. + .++|.++.
T Consensus 3 k~vlVTGas~giG~~~a~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~-~~D~~~~~~~~~~~~~~~~~g~id~lv~ 76 (239)
T 2ekp_A 3 RKALVTGGSRGIGRAIAEALVAR-GYRVAIASRNPEEAAQSLGAVPL-PTDLEKDDPKGLVKRALEALGGLHVLVH 76 (239)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHT-TCEEEEEESSCHHHHHHHTCEEE-ECCTTTSCHHHHHHHHHHHHTSCCEEEE
T ss_pred CEEEEeCCCcHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHhhCcEEE-ecCCchHHHHHHHHHHHHHcCCCCEEEE
Confidence 679999976 4556788888877 88887765432110000001112 33443 3444443332 2 26999887
No 486
>2ph3_A 3-oxoacyl-[acyl carrier protein] reductase; TTHA0415, structural genomics, southea collaboratory for structural genomics, secsg; 1.91A {Thermus thermophilus HB8}
Probab=38.68 E-value=22 Score=32.17 Aligned_cols=69 Identities=12% Similarity=0.215 Sum_probs=41.0
Q ss_pred cEEEEEeCC-hhHHHHHHHHHhcCCCcEEEE-ecCCCCCcC--------CCCCcc-ccCCCCCCHHHHHHHHHH-----c
Q 010065 83 VVVLVIGGG-GREHALCYALKRSHSCDAVFC-APGNAGISN--------SGDATC-IPDLDVLDGDAVISFCRK-----W 146 (519)
Q Consensus 83 ~~vliiG~g-~~~~~l~~~l~~~~g~~~v~~-~~~~~~~~~--------~~~~~~-v~~~d~~d~~~l~~~~~~-----~ 146 (519)
++++|+|++ +....++..|.+. |++++.+ ..+...... ...... + ..|..|.+.+.+++++ .
T Consensus 2 k~vlITGasggiG~~~a~~l~~~-G~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~-~~D~~~~~~~~~~~~~~~~~~~ 79 (245)
T 2ph3_A 2 RKALITGASRGIGRAIALRLAED-GFALAIHYGQNREKAEEVAEEARRRGSPLVAVL-GANLLEAEAATALVHQAAEVLG 79 (245)
T ss_dssp CEEEETTTTSHHHHHHHHHHHTT-TCEEEEEESSCHHHHHHHHHHHHHTTCSCEEEE-ECCTTSHHHHHHHHHHHHHHHT
T ss_pred CEEEEeCCCchHHHHHHHHHHHC-CCEEEEEcCCCHHHHHHHHHHHHhcCCceEEEE-eccCCCHHHHHHHHHHHHHhcC
Confidence 578888866 3556788888877 8887776 322110000 001112 3 4677787776666543 3
Q ss_pred CCcEEEE
Q 010065 147 SVGLVVV 153 (519)
Q Consensus 147 ~id~Vi~ 153 (519)
++|++|.
T Consensus 80 ~~d~li~ 86 (245)
T 2ph3_A 80 GLDTLVN 86 (245)
T ss_dssp CCCEEEE
T ss_pred CCCEEEE
Confidence 7999987
No 487
>3rp8_A Flavoprotein monooxygenase; FAD-binding protein, oxidoreductase; HET: FAD; 1.97A {Klebsiella pneumoniae} PDB: 3rp7_A* 3rp6_A*
Probab=38.48 E-value=29 Score=34.26 Aligned_cols=34 Identities=26% Similarity=0.258 Sum_probs=27.4
Q ss_pred CccEEEEEeCChhHHHHHHHHHhcCCCcEEEEecC
Q 010065 81 QRVVVLVIGGGGREHALCYALKRSHSCDAVFCAPG 115 (519)
Q Consensus 81 ~~~~vliiG~g~~~~~l~~~l~~~~g~~~v~~~~~ 115 (519)
++++|+|+|+|.....++..|++. |+++++++..
T Consensus 22 ~~~dV~IVGaG~aGl~~A~~La~~-G~~V~v~E~~ 55 (407)
T 3rp8_A 22 GHMKAIVIGAGIGGLSAAVALKQS-GIDCDVYEAV 55 (407)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHT-TCEEEEEESS
T ss_pred CCCEEEEECCCHHHHHHHHHHHhC-CCCEEEEeCC
Confidence 468999999997667788999887 9998888643
No 488
>2zcu_A Uncharacterized oxidoreductase YTFG; alpha-beta sandwich; 1.80A {Escherichia coli} PDB: 2zcv_A*
Probab=38.46 E-value=40 Score=31.08 Aligned_cols=67 Identities=16% Similarity=0.129 Sum_probs=40.9
Q ss_pred EEEEEeCC-hhHHHHHHHHHhc-CCCcEEEEecCCCCCcCC--CCCccccCCCCCCHHHHHHHHHHcCCcEEEE
Q 010065 84 VVLVIGGG-GREHALCYALKRS-HSCDAVFCAPGNAGISNS--GDATCIPDLDVLDGDAVISFCRKWSVGLVVV 153 (519)
Q Consensus 84 ~vliiG~g-~~~~~l~~~l~~~-~g~~~v~~~~~~~~~~~~--~~~~~v~~~d~~d~~~l~~~~~~~~id~Vi~ 153 (519)
+|+|+|+. .....++..|.+. .|++++.++.+....... .....+ ..|..|.+.+.+.++ ++|.||.
T Consensus 1 ~ilVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~~~~~~~~-~~D~~d~~~~~~~~~--~~d~vi~ 71 (286)
T 2zcu_A 1 MIAITGATGQLGHYVIESLMKTVPASQIVAIVRNPAKAQALAAQGITVR-QADYGDEAALTSALQ--GVEKLLL 71 (286)
T ss_dssp CEEEESTTSHHHHHHHHHHTTTSCGGGEEEEESCTTTCHHHHHTTCEEE-ECCTTCHHHHHHHTT--TCSEEEE
T ss_pred CEEEEcCCchHHHHHHHHHHhhCCCceEEEEEcChHhhhhhhcCCCeEE-EcCCCCHHHHHHHHh--CCCEEEE
Confidence 58999975 4456678888754 378887776432211100 111223 568888888777664 5798886
No 489
>2ixa_A Alpha-N-acetylgalactosaminidase; NAD, A-ECO conversion, hydrolase; HET: NAD; 2.3A {Flavobacterium meningosepticum} PDB: 2ixb_A*
Probab=38.31 E-value=23 Score=35.86 Aligned_cols=117 Identities=16% Similarity=0.085 Sum_probs=58.7
Q ss_pred CccEEEEEeCChhHHHHHHHHHhcCCCcEEEEecCCCCCc-CCC-------C--CccccCCCCCCHHHHHHHHHHcCCcE
Q 010065 81 QRVVVLVIGGGGREHALCYALKRSHSCDAVFCAPGNAGIS-NSG-------D--ATCIPDLDVLDGDAVISFCRKWSVGL 150 (519)
Q Consensus 81 ~~~~vliiG~g~~~~~l~~~l~~~~g~~~v~~~~~~~~~~-~~~-------~--~~~v~~~d~~d~~~l~~~~~~~~id~ 150 (519)
++++|.|||.|......+..+.+..+++++.+.+.++... ... . ...+ ..+..|.+++ +...++|+
T Consensus 19 ~~~rvgiIG~G~~g~~h~~~l~~~~~~~lvav~d~~~~~~~~~a~~~~~~g~~~~~~~-~~~~~~~~~l---l~~~~vD~ 94 (444)
T 2ixa_A 19 KKVRIAFIAVGLRGQTHVENMARRDDVEIVAFADPDPYMVGRAQEILKKNGKKPAKVF-GNGNDDYKNM---LKDKNIDA 94 (444)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHTCTTEEEEEEECSCHHHHHHHHHHHHHTTCCCCEEE-CSSTTTHHHH---TTCTTCCE
T ss_pred CCceEEEEecCHHHHHHHHHHHhCCCcEEEEEEeCCHHHHHHHHHHHHhcCCCCCcee-ccCCCCHHHH---hcCCCCCE
Confidence 4679999999965444566666655777765543322110 000 0 0001 0011244444 44557999
Q ss_pred EEECCChhhHHHHHHHHHHCCCCeeCCcHHHHHHhcCHHHHHHHHHHcCCCC
Q 010065 151 VVVGPEAPLVSGLANKLVKAGIPTFGPSSEAAALEGSKNFMKNLCDKYGIPT 202 (519)
Q Consensus 151 Vi~g~E~~~~~~~a~~le~~gip~~g~~~~~~~~~~dK~~~k~~l~~~Gi~~ 202 (519)
|+...-...-..++..+-+.|.+++.-.|-+... .+=..+.+.+++.|+..
T Consensus 95 V~i~tp~~~h~~~~~~al~aGkhV~~EKP~a~~~-~ea~~l~~~a~~~g~~~ 145 (444)
T 2ixa_A 95 VFVSSPWEWHHEHGVAAMKAGKIVGMEVSGAITL-EECWDYVKVSEQTGVPL 145 (444)
T ss_dssp EEECCCGGGHHHHHHHHHHTTCEEEECCCCCSSH-HHHHHHHHHHHHHCCCE
T ss_pred EEEcCCcHHHHHHHHHHHHCCCeEEEeCCCcCCH-HHHHHHHHHHHHhCCeE
Confidence 9985444433344444556788776332222111 11133445566777653
No 490
>1f0k_A MURG, UDP-N-acetylglucosamine-N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol...; rossmann fold, transferase; 1.90A {Escherichia coli} SCOP: c.87.1.2 PDB: 1nlm_A*
Probab=38.26 E-value=1.1e+02 Score=28.93 Aligned_cols=38 Identities=13% Similarity=0.082 Sum_probs=22.9
Q ss_pred HHHHHHHHHcCCcEEEECCChhhHHHHHHHHHHCCCCee
Q 010065 137 DAVISFCRKWSVGLVVVGPEAPLVSGLANKLVKAGIPTF 175 (519)
Q Consensus 137 ~~l~~~~~~~~id~Vi~g~E~~~~~~~a~~le~~gip~~ 175 (519)
..+.+++++.++|+|+.......... .......|+|++
T Consensus 86 ~~l~~~l~~~~pDvv~~~~~~~~~~~-~~~~~~~~~p~v 123 (364)
T 1f0k_A 86 RQARAIMKAYKPDVVLGMGGYVSGPG-GLAAWSLGIPVV 123 (364)
T ss_dssp HHHHHHHHHHCCSEEEECSSTTHHHH-HHHHHHTTCCEE
T ss_pred HHHHHHHHhcCCCEEEEeCCcCchHH-HHHHHHcCCCEE
Confidence 34566677889999998543322111 222446789976
No 491
>2dwu_A Glutamate racemase; isomerase; HET: DGL; 1.60A {Bacillus anthracis}
Probab=38.13 E-value=68 Score=30.02 Aligned_cols=85 Identities=14% Similarity=0.184 Sum_probs=44.7
Q ss_pred cEEEEEeCChhHHHHHHHHHhc-CCCcEEEEecCCCCCcCCCCCccccCCCCCCHHH-------HHHHHHHcCCcEEEEC
Q 010065 83 VVVLVIGGGGREHALCYALKRS-HSCDAVFCAPGNAGISNSGDATCIPDLDVLDGDA-------VISFCRKWSVGLVVVG 154 (519)
Q Consensus 83 ~~vliiG~g~~~~~l~~~l~~~-~g~~~v~~~~~~~~~~~~~~~~~v~~~d~~d~~~-------l~~~~~~~~id~Vi~g 154 (519)
++|.|+.+|--...+.+.+.+. ++.+.+++.+.. .+ +.-..+.+. ..+.+.+.++|+|+..
T Consensus 8 ~~IgvfDSGvGGltv~~~i~~~lP~~~~iy~~D~~----------~~-PyG~~s~~~i~~~~~~~~~~L~~~g~d~IViA 76 (276)
T 2dwu_A 8 SVIGVLDSGVGGLTVASEIIRQLPKESICYIGDNE----------RC-PYGPRSVEEVQSFVFEMVEFLKQFPLKALVVA 76 (276)
T ss_dssp CEEEEEESSSTTHHHHHHHHHHCTTSCEEEEECGG----------GC-CCTTSCHHHHHHHHHHHHHHHTTSCEEEEEEC
T ss_pred CeEEEEeCCcchHHHHHHHHHhCCCCcEEEccCCC----------CC-CCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEe
Confidence 4799997773233445555554 345555543221 11 111112222 2233334679999997
Q ss_pred CChhhHHHHHHHHHHCCCCeeCCc
Q 010065 155 PEAPLVSGLANKLVKAGIPTFGPS 178 (519)
Q Consensus 155 ~E~~~~~~~a~~le~~gip~~g~~ 178 (519)
+-......+...-+..++|++|.-
T Consensus 77 CNTas~~~l~~lr~~~~iPVigii 100 (276)
T 2dwu_A 77 CNTAAAATLAALQEALSIPVIGVI 100 (276)
T ss_dssp CHHHHHHHHHHHHHHCSSCEEESH
T ss_pred CCcHHHHHHHHHHHHCCCCEEecc
Confidence 766542233344467799999753
No 492
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=38.00 E-value=30 Score=32.68 Aligned_cols=33 Identities=12% Similarity=0.046 Sum_probs=26.7
Q ss_pred ccEEEEEeCChhHHHHHHHHHhcCCCcEEEEecC
Q 010065 82 RVVVLVIGGGGREHALCYALKRSHSCDAVFCAPG 115 (519)
Q Consensus 82 ~~~vliiG~g~~~~~l~~~l~~~~g~~~v~~~~~ 115 (519)
+++|+|||+|......++.|++. |+++++++..
T Consensus 7 ~~~vvIIG~G~aGl~aA~~l~~~-g~~v~lie~~ 39 (332)
T 3lzw_A 7 VYDITIIGGGPVGLFTAFYGGMR-QASVKIIESL 39 (332)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHT-TCCEEEECSS
T ss_pred cceEEEECCCHHHHHHHHHHHHC-CCCEEEEEcC
Confidence 46899999997766778888876 8998888654
No 493
>3kzx_A HAD-superfamily hydrolase, subfamily IA, variant; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ehrlich chaffeensis; 1.90A {Ehrlichia chaffeensis}
Probab=37.91 E-value=1.1e+02 Score=26.63 Aligned_cols=116 Identities=9% Similarity=0.100 Sum_probs=66.2
Q ss_pred CHHHHHHHHHHcCCcEEEE-CCChhhHHHHHHHHHHCCCC----eeCCcHHHHHHhcCHHHHHHHHHHcCCCCC-Ceeec
Q 010065 135 DGDAVISFCRKWSVGLVVV-GPEAPLVSGLANKLVKAGIP----TFGPSSEAAALEGSKNFMKNLCDKYGIPTA-KYKTF 208 (519)
Q Consensus 135 d~~~l~~~~~~~~id~Vi~-g~E~~~~~~~a~~le~~gip----~~g~~~~~~~~~~dK~~~k~~l~~~Gi~~p-~~~~v 208 (519)
+...+++.+++.++..++. +..... +...++.+|+. .+-.+......--+...++.+++++|++.. ....+
T Consensus 107 ~~~~~l~~l~~~g~~~~i~T~~~~~~---~~~~l~~~gl~~~f~~i~~~~~~~~~Kp~~~~~~~~~~~lgi~~~~~~v~v 183 (231)
T 3kzx_A 107 GAIELLDTLKENNITMAIVSNKNGER---LRSEIHHKNLTHYFDSIIGSGDTGTIKPSPEPVLAALTNINIEPSKEVFFI 183 (231)
T ss_dssp THHHHHHHHHHTTCEEEEEEEEEHHH---HHHHHHHTTCGGGCSEEEEETSSSCCTTSSHHHHHHHHHHTCCCSTTEEEE
T ss_pred CHHHHHHHHHHCCCeEEEEECCCHHH---HHHHHHHCCchhheeeEEcccccCCCCCChHHHHHHHHHcCCCcccCEEEE
Confidence 4667788888877776665 333322 33447777753 110111100011233677889999999876 66666
Q ss_pred CCHHHHHHHHHHhCCCEE-EEeCCCCCCCcEEEeCCHHHHHHHHHHHH
Q 010065 209 TDPNAAKQYIQEEGAPIV-VKADGLAAGKGVIVAMTLEEAYEAVDSML 255 (519)
Q Consensus 209 ~~~~~~~~~~~~~g~P~V-vKP~~g~gs~GV~~v~~~~el~~a~~~~~ 255 (519)
.+...-.+.++..|.+.| +.+... ......+.+..|+.+.+.+++
T Consensus 184 GD~~~Di~~a~~aG~~~v~~~~~~~--~~~~~~~~~~~el~~~l~~~l 229 (231)
T 3kzx_A 184 GDSISDIQSAIEAGCLPIKYGSTNI--IKDILSFKNFYDIRNFICQLI 229 (231)
T ss_dssp ESSHHHHHHHHHTTCEEEEECC-------CCEEESSHHHHHHHHHHHH
T ss_pred cCCHHHHHHHHHCCCeEEEECCCCC--CCCceeeCCHHHHHHHHHHHh
Confidence 543333445667887544 432222 244568999999999888764
No 494
>2gf3_A MSOX, monomeric sarcosine oxidase; flavoprotein oxidase, inhibitor 2-furoic acid, oxidoreductas; HET: FAD; 1.30A {Bacillus SP} SCOP: c.3.1.2 d.16.1.3 PDB: 1el7_A* 1el8_A* 1el9_A* 1eli_A* 1l9e_A* 2a89_A* 2gb0_A* 1el5_A* 3qse_A* 3qsm_A* 3qss_A* 3bhk_A* 3bhf_A* 3m12_A* 3m13_A* 3m0o_A* 1l9c_A* 1l9d_A* 1zov_A*
Probab=37.64 E-value=34 Score=33.31 Aligned_cols=34 Identities=21% Similarity=0.358 Sum_probs=27.9
Q ss_pred ccEEEEEeCChhHHHHHHHHHhcCCCcEEEEecCC
Q 010065 82 RVVVLVIGGGGREHALCYALKRSHSCDAVFCAPGN 116 (519)
Q Consensus 82 ~~~vliiG~g~~~~~l~~~l~~~~g~~~v~~~~~~ 116 (519)
.++|+|||+|......++.|++. |.++++++...
T Consensus 3 ~~dvvIIGaG~~Gl~~A~~La~~-G~~V~vie~~~ 36 (389)
T 2gf3_A 3 HFDVIVVGAGSMGMAAGYQLAKQ-GVKTLLVDAFD 36 (389)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHT-TCCEEEECSSC
T ss_pred cCCEEEECCCHHHHHHHHHHHhC-CCeEEEEeCCC
Confidence 46899999997667788999887 99999887554
No 495
>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli}
Probab=37.63 E-value=36 Score=32.06 Aligned_cols=32 Identities=9% Similarity=0.132 Sum_probs=24.2
Q ss_pred ccEEEEEeCC-hhHHHHHHHHHhcCCCcEEEEec
Q 010065 82 RVVVLVIGGG-GREHALCYALKRSHSCDAVFCAP 114 (519)
Q Consensus 82 ~~~vliiG~g-~~~~~l~~~l~~~~g~~~v~~~~ 114 (519)
.|.++|.|++ |...+++..|.++ |.++++++.
T Consensus 29 gKvalVTGas~GIG~aiA~~la~~-Ga~V~i~~r 61 (273)
T 4fgs_A 29 AKIAVITGATSGIGLAAAKRFVAE-GARVFITGR 61 (273)
T ss_dssp TCEEEEESCSSHHHHHHHHHHHHT-TCEEEEEES
T ss_pred CCEEEEeCcCCHHHHHHHHHHHHC-CCEEEEEEC
Confidence 4678888866 4557789999988 998887753
No 496
>1vli_A Spore coat polysaccharide biosynthesis protein SP; 2636322, JCSG, protein structure initiative, BS SPSE, PSI; 2.38A {Bacillus subtilis} SCOP: b.85.1.1 c.1.10.6
Probab=37.29 E-value=1.6e+02 Score=29.04 Aligned_cols=82 Identities=10% Similarity=0.079 Sum_probs=51.7
Q ss_pred CChhhHHHHHHHHHHCCCCeeCCcHHHHHHhcCHHHHHHHHHHcCCCCCC--eeecCCHHHHHHHHHHhCCCEEEEeCCC
Q 010065 155 PEAPLVSGLANKLVKAGIPTFGPSSEAAALEGSKNFMKNLCDKYGIPTAK--YKTFTDPNAAKQYIQEEGAPIVVKADGL 232 (519)
Q Consensus 155 ~E~~~~~~~a~~le~~gip~~g~~~~~~~~~~dK~~~k~~l~~~Gi~~p~--~~~v~~~~~~~~~~~~~g~P~VvKP~~g 232 (519)
+++++ ..+.+..++.|++++... +|.... +++.++|++.-+ +.-+.+.. +.+.+.+.|-|+++|
T Consensus 99 ~~e~~-~~L~~~~~~~Gi~~~stp-------fD~~sv-d~l~~~~vd~~KIgS~~~~N~p-LL~~va~~gKPViLS---- 164 (385)
T 1vli_A 99 PAEWI-LPLLDYCREKQVIFLSTV-------CDEGSA-DLLQSTSPSAFKIASYEINHLP-LLKYVARLNRPMIFS---- 164 (385)
T ss_dssp CGGGH-HHHHHHHHHTTCEEECBC-------CSHHHH-HHHHTTCCSCEEECGGGTTCHH-HHHHHHTTCSCEEEE----
T ss_pred CHHHH-HHHHHHHHHcCCcEEEcc-------CCHHHH-HHHHhcCCCEEEECcccccCHH-HHHHHHhcCCeEEEE----
Confidence 34443 467888999999998432 333322 556666664421 22234444 444456779999998
Q ss_pred CCCCcEEEeCCHHHHHHHHHHHHh
Q 010065 233 AAGKGVIVAMTLEEAYEAVDSMLL 256 (519)
Q Consensus 233 ~gs~GV~~v~~~~el~~a~~~~~~ 256 (519)
.|+. +.+|+..+++.+..
T Consensus 165 ---tGma---Tl~Ei~~Ave~i~~ 182 (385)
T 1vli_A 165 ---TAGA---EISDVHEAWRTIRA 182 (385)
T ss_dssp ---CTTC---CHHHHHHHHHHHHT
T ss_pred ---CCCC---CHHHHHHHHHHHHH
Confidence 5553 88999999988864
No 497
>3m9w_A D-xylose-binding periplasmic protein; xylose binding protein, conformational changes, SUGA protein; 2.15A {Escherichia coli} PDB: 3m9x_A* 3ma0_A*
Probab=37.06 E-value=53 Score=30.78 Aligned_cols=38 Identities=16% Similarity=0.220 Sum_probs=23.7
Q ss_pred HHHHHHHHcCCcEEEEC-CChhhHHHHHHHHHHCCCCee
Q 010065 138 AVISFCRKWSVGLVVVG-PEAPLVSGLANKLVKAGIPTF 175 (519)
Q Consensus 138 ~l~~~~~~~~id~Vi~g-~E~~~~~~~a~~le~~gip~~ 175 (519)
..++.+...++|+|+.. ..........+.+...|+|++
T Consensus 49 ~~i~~l~~~~vdgiIi~~~~~~~~~~~~~~~~~~~iPvV 87 (313)
T 3m9w_A 49 SQIENMINRGVDVLVIIPYNGQVLSNVVKEAKQEGIKVL 87 (313)
T ss_dssp HHHHHHHHTTCSEEEEECSSTTSCHHHHHHHHTTTCEEE
T ss_pred HHHHHHHHcCCCEEEEeCCChhhhHHHHHHHHHCCCeEE
Confidence 44555666789999983 222212234455777899987
No 498
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=36.97 E-value=27 Score=33.11 Aligned_cols=33 Identities=21% Similarity=0.316 Sum_probs=27.4
Q ss_pred CccEEEEEeCChhHHHHHHHHHhcCCCcEEEEec
Q 010065 81 QRVVVLVIGGGGREHALCYALKRSHSCDAVFCAP 114 (519)
Q Consensus 81 ~~~~vliiG~g~~~~~l~~~l~~~~g~~~v~~~~ 114 (519)
.+++|+|||+|......+..|++. |+++++++.
T Consensus 21 ~~~~vvIIG~G~aGl~aA~~l~~~-g~~v~vie~ 53 (338)
T 3itj_A 21 VHNKVTIIGSGPAAHTAAIYLARA-EIKPILYEG 53 (338)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHT-TCCCEEECC
T ss_pred CCCCEEEECcCHHHHHHHHHHHHC-CCCEEEEec
Confidence 357999999997777778888887 899888865
No 499
>3hn7_A UDP-N-acetylmuramate-L-alanine ligase; ATP-binding, nucleotide-binding, structural genomics, joint for structural genomics, JCSG; HET: MSE; 1.65A {Psychrobacter arcticus 273-4}
Probab=36.76 E-value=1.3e+02 Score=30.92 Aligned_cols=35 Identities=11% Similarity=0.018 Sum_probs=25.0
Q ss_pred CCccEEEEEeCChhHHH-HHHHHHhcCCCcEEEEecC
Q 010065 80 GQRVVVLVIGGGGREHA-LCYALKRSHSCDAVFCAPG 115 (519)
Q Consensus 80 ~~~~~vliiG~g~~~~~-l~~~l~~~~g~~~v~~~~~ 115 (519)
+..++|.++|.|+.... +++.|++. |+++...|..
T Consensus 17 ~~~~~i~~iGiGg~Gms~lA~~l~~~-G~~V~~sD~~ 52 (524)
T 3hn7_A 17 FQGMHIHILGICGTFMGSLALLARAL-GHTVTGSDAN 52 (524)
T ss_dssp --CCEEEEETTTSHHHHHHHHHHHHT-TCEEEEEESC
T ss_pred ecCCEEEEEEecHhhHHHHHHHHHhC-CCEEEEECCC
Confidence 35689999999987653 57777766 9988776643
No 500
>3l6u_A ABC-type sugar transport system periplasmic compo; structural genomics, nysgrc, target 11006S, PSI-2, protein S initiative; 1.90A {Exiguobacterium sibiricum}
Probab=36.68 E-value=50 Score=30.44 Aligned_cols=38 Identities=21% Similarity=0.277 Sum_probs=23.5
Q ss_pred HHHHHHHHcCCcEEEEC-CChhhHHHHHHHHHHCCCCee
Q 010065 138 AVISFCRKWSVGLVVVG-PEAPLVSGLANKLVKAGIPTF 175 (519)
Q Consensus 138 ~l~~~~~~~~id~Vi~g-~E~~~~~~~a~~le~~gip~~ 175 (519)
..++.+...++|+|+.. ..........+.+...|+|++
T Consensus 55 ~~~~~l~~~~vdgiI~~~~~~~~~~~~~~~~~~~~iPvV 93 (293)
T 3l6u_A 55 EQILEFVHLKVDAIFITTLDDVYIGSAIEEAKKAGIPVF 93 (293)
T ss_dssp HHHHHHHHTTCSEEEEECSCTTTTHHHHHHHHHTTCCEE
T ss_pred HHHHHHHHcCCCEEEEecCChHHHHHHHHHHHHcCCCEE
Confidence 44455556789999973 222222234455777899987
Done!