BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 010070
(519 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3NVS|A Chain A, 1.02 Angstrom Resolution Crystal Structure Of
3-Phosphoshikimate 1- Carboxyvinyltransferase From
Vibrio Cholerae In Complex With Shikimate-3-Phosphate
(Partially Photolyzed) And Glyphosate
Length = 450
Score = 407 bits (1045), Expect = e-113, Method: Compositional matrix adjust.
Identities = 227/446 (50%), Positives = 280/446 (62%), Gaps = 17/446 (3%)
Query: 74 QSKASE-IVLQPIREISGTVTLPGSKSLSNRILLLAALSEGTTVVDNLLSSEDIHHMLDA 132
QS A E + LQPI ISG V LPGSKS+SNR LLLAAL+ GTT + NLL S+DI HML+A
Sbjct: 21 QSNAMESLTLQPIELISGEVNLPGSKSVSNRALLLAALASGTTRLTNLLDSDDIRHMLNA 80
Query: 133 LKKLGLNVEEDFAMKRAIVEGCGGLFPLAKQQTGEIELFLGNAGTAMRPLTAAVTAAGGN 192
L KLG+N VEG G F T +ELFLGNAGTAMRPL AA+ G+
Sbjct: 81 LTKLGVNYRLSADKTTCEVEGLGQAF----HTTQPLELFLGNAGTAMRPLAAALCLGQGD 136
Query: 193 LSYILDGVPRMRERPIGDLVTGLKQLGADVDCILGTNCPPVRINXXXXXXXXXXXXXXXX 252
Y+L G PRM+ERPIG LV L+Q GA ++ + N PP+RI
Sbjct: 137 --YVLTGEPRMKERPIGHLVDALRQAGAQIEYLEQENFPPLRIQGTGLQAGTVTIDGSIS 194
Query: 253 XXQYXXXXXXXXXXXXGNVEIEIIDKLISVPYVEMTLKLMERFGVFVEHSDSWDRFFIQG 312
Q+ G V I+I+ +L+S PY+++TL +ME+FGV V + D + F I
Sbjct: 195 S-QFLTAFLMSAPLAQGKVTIKIVGELVSKPYIDITLHIMEQFGVQVINHD-YQEFVIPA 252
Query: 313 GQKYKSPGNAFVEGDASSASYFXXXXXXXXXXXXXEGCGTSSLQGDVKFAEVLEKMGAKV 372
GQ Y SPG VEGDASSASYF G G +S+QGD++FA+ LEKMGA++
Sbjct: 253 GQSYVSPGQFLVEGDASSASYFLAAAAIKGGEVKVTGIGKNSIQGDIQFADALEKMGAQI 312
Query: 373 TWTENSVTVTGPPRDPYGRKHLRAVDVNMNKMPDVAMTLAVVALFADGPTAIRDVASWRV 432
W ++ V R L AVD++ N +PD AMT+A ALFA G TAIR+V +WRV
Sbjct: 313 EWGDDYVIAR--------RGELNAVDLDFNHIPDAAMTIATTALFAKGTTAIRNVYNWRV 364
Query: 433 KETERMIAICTELRKLGATVEEGPDYCVITPPEKLKVAAIDTYDDHRMAMAFSLAACADV 492
KET+R+ A+ TELRK+GATVEEG D+ VITPP KL AAIDTYDDHRMAM FSL A +D
Sbjct: 365 KETDRLAAMATELRKVGATVEEGEDFIVITPPTKLIHAAIDTYDDHRMAMCFSLVALSDT 424
Query: 493 PVTIKDPSCTRKTFPDYFDVLDSVTK 518
PVTI DP CT KTFPDYFD +++
Sbjct: 425 PVTINDPKCTSKTFPDYFDKFAQLSR 450
>pdb|1G6S|A Chain A, Structure Of Epsp Synthase Liganded With Shikimate-3-
Phosphate And Glyphosate
pdb|1G6T|A Chain A, Structure Of Epsp Synthase Liganded With Shikimate-3-
Phosphate
pdb|1X8R|A Chain A, Epsps Liganded With The (s)-phosphonate Analog Of The
Tetrahedral Reaction Intermediate
pdb|1X8T|A Chain A, Epsps Liganded With The (r)-phosphonate Analog Of The
Tetrahedral Reaction Intermediate
pdb|2AA9|A Chain A, Epsp Synthase Liganded With Shikimate
pdb|2AAY|A Chain A, Epsp Synthase Liganded With Shikimate And Glyphosate
pdb|2PQ9|A Chain A, E. Coli Epsps Liganded With (R)-Difluoromethyl Tetrahedral
Reaction Intermediate Analog
Length = 427
Score = 379 bits (972), Expect = e-105, Method: Compositional matrix adjust.
Identities = 207/439 (47%), Positives = 274/439 (62%), Gaps = 17/439 (3%)
Query: 80 IVLQPIREISGTVTLPGSKSLSNRILLLAALSEGTTVVDNLLSSEDIHHMLDALKKLGLN 139
+ LQPI + GT+ LPGSKS+SNR LLLAAL+ G TV+ NLL S+D+ HML+AL LG++
Sbjct: 4 LTLQPIARVDGTINLPGSKSVSNRALLLAALAHGKTVLTNLLDSDDVRHMLNALTALGVS 63
Query: 140 VEEDFAMKRAIVEGCGGLFPLAKQQTGEIELFLGNAGTAMRPLTAAVTAAGGNLSYILDG 199
R + G GG PL + G +ELFLGNAGTAMRPL AA+ ++ +L G
Sbjct: 64 YTLSADRTRCEIIGNGG--PLHAE--GALELFLGNAGTAMRPLAAALCLGSNDI--VLTG 117
Query: 200 VPRMRERPIGDLVTGLKQLGADVDCILGTNCPPVRINXXXXXXXXXXXXXXXXXXQYXXX 259
PRM+ERPIG LV L+ GA + + N PP+R+ Q+
Sbjct: 118 EPRMKERPIGHLVDALRLGGAKITYLEQENYPPLRLQGGFTGGNVDVDGSVSS--QFLTA 175
Query: 260 XXXXXXXXXGNVEIEIIDKLISVPYVEMTLKLMERFGVFVEHSDSWDRFFIQGGQKYKSP 319
+ I I L+S PY+++TL LM+ FGV +E+ + +F ++GGQ Y+SP
Sbjct: 176 LLMTAPLAPEDTVIRIKGDLVSKPYIDITLNLMKTFGVEIENQ-HYQQFVVKGGQSYQSP 234
Query: 320 GNAFVEGDASSASYFXXXXXXXXXXXXXEGCGTSSLQGDVKFAEVLEKMGAKVTWTENSV 379
G VEGDASSASYF G G +S+QGD++FA+VLEKMGA + W ++ +
Sbjct: 235 GTYLVEGDASSASYFLAAAAIKGGTVKVTGIGRNSMQGDIRFADVLEKMGATICWGDDYI 294
Query: 380 TVTGPPRDPYGRKHLRAVDVNMNKMPDVAMTLAVVALFADGPTAIRDVASWRVKETERMI 439
+ T R L A+D++MN +PD AMT+A ALFA G T +R++ +WRVKET+R+
Sbjct: 295 SCT--------RGELNAIDMDMNHIPDAAMTIATAALFAKGTTTLRNIYNWRVKETDRLF 346
Query: 440 AICTELRKLGATVEEGPDYCVITPPEKLKVAAIDTYDDHRMAMAFSLAACADVPVTIKDP 499
A+ TELRK+GA VEEG DY ITPPEKL A I TY+DHRMAM FSL A +D PVTI DP
Sbjct: 347 AMATELRKVGAEVEEGHDYIRITPPEKLNFAEIATYNDHRMAMCFSLVALSDTPVTILDP 406
Query: 500 SCTRKTFPDYFDVLDSVTK 518
CT KTFPDYF+ L +++
Sbjct: 407 KCTAKTFPDYFEQLARISQ 425
>pdb|1EPS|A Chain A, Structure And Topological Symmetry Of The Glyphosphate
5-enol- Pyruvylshikimate-3-phosphate Synthase: A
Distinctive Protein Fold
Length = 427
Score = 377 bits (968), Expect = e-105, Method: Compositional matrix adjust.
Identities = 206/439 (46%), Positives = 274/439 (62%), Gaps = 17/439 (3%)
Query: 80 IVLQPIREISGTVTLPGSKSLSNRILLLAALSEGTTVVDNLLSSEDIHHMLDALKKLGLN 139
+ LQPI + GT+ LPGSK++SNR LLLAAL+ G TV+ NLL S+D+ HML+AL LG++
Sbjct: 4 LTLQPIARVDGTINLPGSKTVSNRALLLAALAHGKTVLTNLLDSDDVRHMLNALTALGVS 63
Query: 140 VEEDFAMKRAIVEGCGGLFPLAKQQTGEIELFLGNAGTAMRPLTAAVTAAGGNLSYILDG 199
R + G GG PL + G +ELFLGNAGTAMRPL AA+ ++ +L G
Sbjct: 64 YTLSADRTRCEIIGNGG--PLHAE--GALELFLGNAGTAMRPLAAALCLGSNDI--VLTG 117
Query: 200 VPRMRERPIGDLVTGLKQLGADVDCILGTNCPPVRINXXXXXXXXXXXXXXXXXXQYXXX 259
PRM+ERPIG LV L+ GA + + N PP+R+ Q+
Sbjct: 118 EPRMKERPIGHLVDALRLGGAKITYLEQENYPPLRLQGGFTGGNVDVDGSVSS--QFLTA 175
Query: 260 XXXXXXXXXGNVEIEIIDKLISVPYVEMTLKLMERFGVFVEHSDSWDRFFIQGGQKYKSP 319
+ I I L+S PY+++TL LM+ FGV +E+ + +F ++GGQ Y+SP
Sbjct: 176 LLMTAPLAPEDTVIRIKGDLVSKPYIDITLNLMKTFGVEIENQ-HYQQFVVKGGQSYQSP 234
Query: 320 GNAFVEGDASSASYFXXXXXXXXXXXXXEGCGTSSLQGDVKFAEVLEKMGAKVTWTENSV 379
G VEGDASSASYF G G +S+QGD++FA+VLEKMGA + W ++ +
Sbjct: 235 GTYLVEGDASSASYFLAAAAIKGGTVKVTGIGRNSMQGDIRFADVLEKMGATICWGDDYI 294
Query: 380 TVTGPPRDPYGRKHLRAVDVNMNKMPDVAMTLAVVALFADGPTAIRDVASWRVKETERMI 439
+ T R L A+D++MN +PD AMT+A ALFA G T +R++ +WRVKET+R+
Sbjct: 295 SCT--------RGELNAIDMDMNHIPDAAMTIATAALFAKGTTRLRNIYNWRVKETDRLF 346
Query: 440 AICTELRKLGATVEEGPDYCVITPPEKLKVAAIDTYDDHRMAMAFSLAACADVPVTIKDP 499
A+ TELRK+GA VEEG DY ITPPEKL A I TY+DHRMAM FSL A +D PVTI DP
Sbjct: 347 AMATELRKVGAEVEEGHDYIRITPPEKLNFAEIATYNDHRMAMCFSLVALSDTPVTILDP 406
Query: 500 SCTRKTFPDYFDVLDSVTK 518
CT KTFPDYF+ L +++
Sbjct: 407 KCTAKTFPDYFEQLARISQ 425
>pdb|3FJX|A Chain A, E. Coli Epsp Synthase (T97i) Liganded With S3p
pdb|3FJZ|A Chain A, E. Coli Epsp Synthase (T97i) Liganded With S3p And
Glyphosate
Length = 427
Score = 376 bits (966), Expect = e-104, Method: Compositional matrix adjust.
Identities = 206/439 (46%), Positives = 273/439 (62%), Gaps = 17/439 (3%)
Query: 80 IVLQPIREISGTVTLPGSKSLSNRILLLAALSEGTTVVDNLLSSEDIHHMLDALKKLGLN 139
+ LQPI + GT+ LPGSKS+SNR LLLAAL+ G TV+ NLL S+D+ HML+AL LG++
Sbjct: 4 LTLQPIARVDGTINLPGSKSVSNRALLLAALAHGKTVLTNLLDSDDVRHMLNALTALGVS 63
Query: 140 VEEDFAMKRAIVEGCGGLFPLAKQQTGEIELFLGNAGTAMRPLTAAVTAAGGNLSYILDG 199
R + G GG PL + G +ELFLGNAG AMRPL AA+ ++ +L G
Sbjct: 64 YTLSADRTRCEIIGNGG--PLHAE--GALELFLGNAGIAMRPLAAALCLGSNDI--VLTG 117
Query: 200 VPRMRERPIGDLVTGLKQLGADVDCILGTNCPPVRINXXXXXXXXXXXXXXXXXXQYXXX 259
PRM+ERPIG LV L+ GA + + N PP+R+ Q+
Sbjct: 118 EPRMKERPIGHLVDALRLGGAKITYLEQENYPPLRLQGGFTGGNVDVDGSVSS--QFLTA 175
Query: 260 XXXXXXXXXGNVEIEIIDKLISVPYVEMTLKLMERFGVFVEHSDSWDRFFIQGGQKYKSP 319
+ I I L+S PY+++TL LM+ FGV +E+ + +F ++GGQ Y+SP
Sbjct: 176 LLMTAPLAPEDTVIRIKGDLVSKPYIDITLNLMKTFGVEIENQ-HYQQFVVKGGQSYQSP 234
Query: 320 GNAFVEGDASSASYFXXXXXXXXXXXXXEGCGTSSLQGDVKFAEVLEKMGAKVTWTENSV 379
G VEGDASSASYF G G +S+QGD++FA+VLEKMGA + W ++ +
Sbjct: 235 GTYLVEGDASSASYFLAAAAIKGGTVKVTGIGRNSMQGDIRFADVLEKMGATICWGDDYI 294
Query: 380 TVTGPPRDPYGRKHLRAVDVNMNKMPDVAMTLAVVALFADGPTAIRDVASWRVKETERMI 439
+ T R L A+D++MN +PD AMT+A ALFA G T +R++ +WRVKET+R+
Sbjct: 295 SCT--------RGELNAIDMDMNHIPDAAMTIATAALFAKGTTTLRNIYNWRVKETDRLF 346
Query: 440 AICTELRKLGATVEEGPDYCVITPPEKLKVAAIDTYDDHRMAMAFSLAACADVPVTIKDP 499
A+ TELRK+GA VEEG DY ITPPEKL A I TY+DHRMAM FSL A +D PVTI DP
Sbjct: 347 AMATELRKVGAEVEEGHDYIRITPPEKLNFAEIATYNDHRMAMCFSLVALSDTPVTILDP 406
Query: 500 SCTRKTFPDYFDVLDSVTK 518
CT KTFPDYF+ L +++
Sbjct: 407 KCTAKTFPDYFEQLARISQ 425
>pdb|1MI4|A Chain A, Glyphosate Insensitive G96a Mutant Epsp Synthase Liganded
With Shikimate-3-Phosphate
Length = 427
Score = 376 bits (966), Expect = e-104, Method: Compositional matrix adjust.
Identities = 206/439 (46%), Positives = 273/439 (62%), Gaps = 17/439 (3%)
Query: 80 IVLQPIREISGTVTLPGSKSLSNRILLLAALSEGTTVVDNLLSSEDIHHMLDALKKLGLN 139
+ LQPI + GT+ LPGSKS+SNR LLLAAL+ G TV+ NLL S+D+ HML+AL LG++
Sbjct: 4 LTLQPIARVDGTINLPGSKSVSNRALLLAALAHGKTVLTNLLDSDDVRHMLNALTALGVS 63
Query: 140 VEEDFAMKRAIVEGCGGLFPLAKQQTGEIELFLGNAGTAMRPLTAAVTAAGGNLSYILDG 199
R + G GG PL + G +ELFLGNA TAMRPL AA+ ++ +L G
Sbjct: 64 YTLSADRTRCEIIGNGG--PLHAE--GALELFLGNAATAMRPLAAALCLGSNDI--VLTG 117
Query: 200 VPRMRERPIGDLVTGLKQLGADVDCILGTNCPPVRINXXXXXXXXXXXXXXXXXXQYXXX 259
PRM+ERPIG LV L+ GA + + N PP+R+ Q+
Sbjct: 118 EPRMKERPIGHLVDALRLGGAKITYLEQENYPPLRLQGGFTGGNVDVDGSVSS--QFLTA 175
Query: 260 XXXXXXXXXGNVEIEIIDKLISVPYVEMTLKLMERFGVFVEHSDSWDRFFIQGGQKYKSP 319
+ I I L+S PY+++TL LM+ FGV +E+ + +F ++GGQ Y+SP
Sbjct: 176 LLMTAPLAPEDTVIRIKGDLVSKPYIDITLNLMKTFGVEIENQ-HYQQFVVKGGQSYQSP 234
Query: 320 GNAFVEGDASSASYFXXXXXXXXXXXXXEGCGTSSLQGDVKFAEVLEKMGAKVTWTENSV 379
G VEGDASSASYF G G +S+QGD++FA+VLEKMGA + W ++ +
Sbjct: 235 GTYLVEGDASSASYFLAAAAIKGGTVKVTGIGRNSMQGDIRFADVLEKMGATICWGDDYI 294
Query: 380 TVTGPPRDPYGRKHLRAVDVNMNKMPDVAMTLAVVALFADGPTAIRDVASWRVKETERMI 439
+ T R L A+D++MN +PD AMT+A ALFA G T +R++ +WRVKET+R+
Sbjct: 295 SCT--------RGELNAIDMDMNHIPDAAMTIATAALFAKGTTTLRNIYNWRVKETDRLF 346
Query: 440 AICTELRKLGATVEEGPDYCVITPPEKLKVAAIDTYDDHRMAMAFSLAACADVPVTIKDP 499
A+ TELRK+GA VEEG DY ITPPEKL A I TY+DHRMAM FSL A +D PVTI DP
Sbjct: 347 AMATELRKVGAEVEEGHDYIRITPPEKLNFAEIATYNDHRMAMCFSLVALSDTPVTILDP 406
Query: 500 SCTRKTFPDYFDVLDSVTK 518
CT KTFPDYF+ L +++
Sbjct: 407 KCTAKTFPDYFEQLARISQ 425
>pdb|2QFS|A Chain A, E.coli Epsp Synthase Pro101ser Liganded With S3p
pdb|2QFT|A Chain A, E.Coli Epsp Synthase Pro101ser Liganded With S3p And
Glyphosate
Length = 427
Score = 376 bits (965), Expect = e-104, Method: Compositional matrix adjust.
Identities = 206/439 (46%), Positives = 273/439 (62%), Gaps = 17/439 (3%)
Query: 80 IVLQPIREISGTVTLPGSKSLSNRILLLAALSEGTTVVDNLLSSEDIHHMLDALKKLGLN 139
+ LQPI + GT+ LPGSKS+SNR LLLAAL+ G TV+ NLL S+D+ HML+AL LG++
Sbjct: 4 LTLQPIARVDGTINLPGSKSVSNRALLLAALAHGKTVLTNLLDSDDVRHMLNALTALGVS 63
Query: 140 VEEDFAMKRAIVEGCGGLFPLAKQQTGEIELFLGNAGTAMRPLTAAVTAAGGNLSYILDG 199
R + G GG PL + G +ELFLGNAGTAMR L AA+ ++ +L G
Sbjct: 64 YTLSADRTRCEIIGNGG--PLHAE--GALELFLGNAGTAMRSLAAALCLGSNDI--VLTG 117
Query: 200 VPRMRERPIGDLVTGLKQLGADVDCILGTNCPPVRINXXXXXXXXXXXXXXXXXXQYXXX 259
PRM+ERPIG LV L+ GA + + N PP+R+ Q+
Sbjct: 118 EPRMKERPIGHLVDALRLGGAKITYLEQENYPPLRLQGGFTGGNVDVDGSVSS--QFLTA 175
Query: 260 XXXXXXXXXGNVEIEIIDKLISVPYVEMTLKLMERFGVFVEHSDSWDRFFIQGGQKYKSP 319
+ I I L+S PY+++TL LM+ FGV +E+ + +F ++GGQ Y+SP
Sbjct: 176 LLMTAPLAPEDTVIRIKGDLVSKPYIDITLNLMKTFGVEIENQ-HYQQFVVKGGQSYQSP 234
Query: 320 GNAFVEGDASSASYFXXXXXXXXXXXXXEGCGTSSLQGDVKFAEVLEKMGAKVTWTENSV 379
G VEGDASSASYF G G +S+QGD++FA+VLEKMGA + W ++ +
Sbjct: 235 GTYLVEGDASSASYFLAAAAIKGGTVKVTGIGRNSMQGDIRFADVLEKMGATICWGDDYI 294
Query: 380 TVTGPPRDPYGRKHLRAVDVNMNKMPDVAMTLAVVALFADGPTAIRDVASWRVKETERMI 439
+ T R L A+D++MN +PD AMT+A ALFA G T +R++ +WRVKET+R+
Sbjct: 295 SCT--------RGELNAIDMDMNHIPDAAMTIATAALFAKGTTTLRNIYNWRVKETDRLF 346
Query: 440 AICTELRKLGATVEEGPDYCVITPPEKLKVAAIDTYDDHRMAMAFSLAACADVPVTIKDP 499
A+ TELRK+GA VEEG DY ITPPEKL A I TY+DHRMAM FSL A +D PVTI DP
Sbjct: 347 AMATELRKVGAEVEEGHDYIRITPPEKLNFAEIATYNDHRMAMCFSLVALSDTPVTILDP 406
Query: 500 SCTRKTFPDYFDVLDSVTK 518
CT KTFPDYF+ L +++
Sbjct: 407 KCTAKTFPDYFEQLARISQ 425
>pdb|2QFQ|A Chain A, E. Coli Epsp Synthase Pro101leu Liganded With S3p
pdb|2QFU|A Chain A, E.Coli Epsp Synthase Pro101leu Liganded With S3p And
Glyphosate
Length = 427
Score = 375 bits (962), Expect = e-104, Method: Compositional matrix adjust.
Identities = 206/439 (46%), Positives = 273/439 (62%), Gaps = 17/439 (3%)
Query: 80 IVLQPIREISGTVTLPGSKSLSNRILLLAALSEGTTVVDNLLSSEDIHHMLDALKKLGLN 139
+ LQPI + GT+ LPGSKS+SNR LLLAAL+ G TV+ NLL S+D+ HML+AL LG++
Sbjct: 4 LTLQPIARVDGTINLPGSKSVSNRALLLAALAHGKTVLTNLLDSDDVRHMLNALTALGVS 63
Query: 140 VEEDFAMKRAIVEGCGGLFPLAKQQTGEIELFLGNAGTAMRPLTAAVTAAGGNLSYILDG 199
R + G GG PL + G +ELFLGNAGTAMR L AA+ ++ +L G
Sbjct: 64 YTLSADRTRCEIIGNGG--PLHAE--GALELFLGNAGTAMRLLAAALCLGSNDI--VLTG 117
Query: 200 VPRMRERPIGDLVTGLKQLGADVDCILGTNCPPVRINXXXXXXXXXXXXXXXXXXQYXXX 259
PRM+ERPIG LV L+ GA + + N PP+R+ Q+
Sbjct: 118 EPRMKERPIGHLVDALRLGGAKITYLEQENYPPLRLQGGFTGGNVDVDGSVSS--QFLTA 175
Query: 260 XXXXXXXXXGNVEIEIIDKLISVPYVEMTLKLMERFGVFVEHSDSWDRFFIQGGQKYKSP 319
+ I I L+S PY+++TL LM+ FGV +E+ + +F ++GGQ Y+SP
Sbjct: 176 LLMTAPLAPEDTVIRIKGDLVSKPYIDITLNLMKTFGVEIENQ-HYQQFVVKGGQSYQSP 234
Query: 320 GNAFVEGDASSASYFXXXXXXXXXXXXXEGCGTSSLQGDVKFAEVLEKMGAKVTWTENSV 379
G VEGDASSASYF G G +S+QGD++FA+VLEKMGA + W ++ +
Sbjct: 235 GTYLVEGDASSASYFLAAAAIKGGTVKVTGIGRNSMQGDIRFADVLEKMGATICWGDDYI 294
Query: 380 TVTGPPRDPYGRKHLRAVDVNMNKMPDVAMTLAVVALFADGPTAIRDVASWRVKETERMI 439
+ T R L A+D++MN +PD AMT+A ALFA G T +R++ +WRVKET+R+
Sbjct: 295 SCT--------RGELNAIDMDMNHIPDAAMTIATAALFAKGTTTLRNIYNWRVKETDRLF 346
Query: 440 AICTELRKLGATVEEGPDYCVITPPEKLKVAAIDTYDDHRMAMAFSLAACADVPVTIKDP 499
A+ TELRK+GA VEEG DY ITPPEKL A I TY+DHRMAM FSL A +D PVTI DP
Sbjct: 347 AMATELRKVGAEVEEGHDYIRITPPEKLNFAEIATYNDHRMAMCFSLVALSDTPVTILDP 406
Query: 500 SCTRKTFPDYFDVLDSVTK 518
CT KTFPDYF+ L +++
Sbjct: 407 KCTAKTFPDYFEQLARISQ 425
>pdb|3FK0|A Chain A, E. Coli Epsp Synthase (Tips Mutation) Liganded With S3p
pdb|3FK1|A Chain A, E. Coli Epsp Synthase (Tips Mutation) Liganded With S3p
And Glyphosate
Length = 427
Score = 374 bits (959), Expect = e-104, Method: Compositional matrix adjust.
Identities = 205/439 (46%), Positives = 272/439 (61%), Gaps = 17/439 (3%)
Query: 80 IVLQPIREISGTVTLPGSKSLSNRILLLAALSEGTTVVDNLLSSEDIHHMLDALKKLGLN 139
+ LQPI + GT+ LPGSKS+SNR LLLAAL+ G TV+ NLL S+D+ HML+AL LG++
Sbjct: 4 LTLQPIARVDGTINLPGSKSVSNRALLLAALAHGKTVLTNLLDSDDVRHMLNALTALGVS 63
Query: 140 VEEDFAMKRAIVEGCGGLFPLAKQQTGEIELFLGNAGTAMRPLTAAVTAAGGNLSYILDG 199
R + G GG PL + G +ELFLGNAG AMR L AA+ ++ +L G
Sbjct: 64 YTLSADRTRCEIIGNGG--PLHAE--GALELFLGNAGIAMRSLAAALCLGSNDI--VLTG 117
Query: 200 VPRMRERPIGDLVTGLKQLGADVDCILGTNCPPVRINXXXXXXXXXXXXXXXXXXQYXXX 259
PRM+ERPIG LV L+ GA + + N PP+R+ Q+
Sbjct: 118 EPRMKERPIGHLVDALRLGGAKITYLEQENYPPLRLQGGFTGGNVDVDGSVSS--QFLTA 175
Query: 260 XXXXXXXXXGNVEIEIIDKLISVPYVEMTLKLMERFGVFVEHSDSWDRFFIQGGQKYKSP 319
+ I I L+S PY+++TL LM+ FGV +E+ + +F ++GGQ Y+SP
Sbjct: 176 LLMTAPLAPEDTVIRIKGDLVSKPYIDITLNLMKTFGVEIENQ-HYQQFVVKGGQSYQSP 234
Query: 320 GNAFVEGDASSASYFXXXXXXXXXXXXXEGCGTSSLQGDVKFAEVLEKMGAKVTWTENSV 379
G VEGDASSASYF G G +S+QGD++FA+VLEKMGA + W ++ +
Sbjct: 235 GTYLVEGDASSASYFLAAAAIKGGTVKVTGIGRNSMQGDIRFADVLEKMGATICWGDDYI 294
Query: 380 TVTGPPRDPYGRKHLRAVDVNMNKMPDVAMTLAVVALFADGPTAIRDVASWRVKETERMI 439
+ T R L A+D++MN +PD AMT+A ALFA G T +R++ +WRVKET+R+
Sbjct: 295 SCT--------RGELNAIDMDMNHIPDAAMTIATAALFAKGTTTLRNIYNWRVKETDRLF 346
Query: 440 AICTELRKLGATVEEGPDYCVITPPEKLKVAAIDTYDDHRMAMAFSLAACADVPVTIKDP 499
A+ TELRK+GA VEEG DY ITPPEKL A I TY+DHRMAM FSL A +D PVTI DP
Sbjct: 347 AMATELRKVGAEVEEGHDYIRITPPEKLNFAEIATYNDHRMAMCFSLVALSDTPVTILDP 406
Query: 500 SCTRKTFPDYFDVLDSVTK 518
CT KTFPDYF+ L +++
Sbjct: 407 KCTAKTFPDYFEQLARISQ 425
>pdb|1Q36|A Chain A, Epsp Synthase (Asp313ala) Liganded With Tetrahedral
Reaction Intermediate
Length = 427
Score = 363 bits (933), Expect = e-101, Method: Compositional matrix adjust.
Identities = 206/439 (46%), Positives = 273/439 (62%), Gaps = 17/439 (3%)
Query: 80 IVLQPIREISGTVTLPGSKSLSNRILLLAALSEGTTVVDNLLSSEDIHHMLDALKKLGLN 139
+ LQPI + GT+ LPGSKS+SNR LLLAAL+ G TV+ NLL S+D+ HML+AL LG++
Sbjct: 4 LTLQPIARVDGTINLPGSKSVSNRALLLAALAHGKTVLTNLLDSDDVRHMLNALTALGVS 63
Query: 140 VEEDFAMKRAIVEGCGGLFPLAKQQTGEIELFLGNAGTAMRPLTAAVTAAGGNLSYILDG 199
R + G GG PL + G +ELFLGNAGTAMRPL AA+ ++ +L G
Sbjct: 64 YTLSADRTRCEIIGNGG--PLHAE--GALELFLGNAGTAMRPLAAALCLGSNDI--VLTG 117
Query: 200 VPRMRERPIGDLVTGLKQLGADVDCILGTNCPPVRINXXXXXXXXXXXXXXXXXXQYXXX 259
PRM+ERPIG LV L+ GA + + N PP+R+ Q+
Sbjct: 118 EPRMKERPIGHLVDALRLGGAKITYLEQENYPPLRLQGGFTGGNVDVDGSVSS--QFLTA 175
Query: 260 XXXXXXXXXGNVEIEIIDKLISVPYVEMTLKLMERFGVFVEHSDSWDRFFIQGGQKYKSP 319
+ I I L+S PY+++TL LM+ FGV +E+ + +F ++GGQ Y+SP
Sbjct: 176 LLMTAPLAPEDTVIRIKGDLVSKPYIDITLNLMKTFGVEIENQ-HYQQFVVKGGQSYQSP 234
Query: 320 GNAFVEGDASSASYFXXXXXXXXXXXXXEGCGTSSLQGDVKFAEVLEKMGAKVTWTENSV 379
G VEGDASSASYF G G +S+QGD++FA+VLEKMGA + W ++ +
Sbjct: 235 GTYLVEGDASSASYFLAAAAIKGGTVKVTGIGRNSMQGDIRFADVLEKMGATICWGDDYI 294
Query: 380 TVTGPPRDPYGRKHLRAVDVNMNKMPDVAMTLAVVALFADGPTAIRDVASWRVKETERMI 439
+ T R L A+D++MN +P AMT+A ALFA G T +R++ +WRVKET+R+
Sbjct: 295 SCT--------RGELNAIDMDMNHIPAAAMTIATAALFAKGTTTLRNIYNWRVKETDRLF 346
Query: 440 AICTELRKLGATVEEGPDYCVITPPEKLKVAAIDTYDDHRMAMAFSLAACADVPVTIKDP 499
A+ TELRK+GA VEEG DY ITPPEKL A I TY+DHRMAM FSL A +D PVTI DP
Sbjct: 347 AMATELRKVGAEVEEGHDYIRITPPEKLNFAEIATYNDHRMAMCFSLVALSDTPVTILDP 406
Query: 500 SCTRKTFPDYFDVLDSVTK 518
CT KTFPDYF+ L +++
Sbjct: 407 KCTAKTFPDYFEQLARISQ 425
>pdb|3TI2|A Chain A, 1.90 Angstrom Resolution Crystal Structure Of N-Terminal
Domain 3- Phosphoshikimate 1-Carboxyvinyltransferase
From Vibrio Cholerae
pdb|3TI2|B Chain B, 1.90 Angstrom Resolution Crystal Structure Of N-Terminal
Domain 3- Phosphoshikimate 1-Carboxyvinyltransferase
From Vibrio Cholerae
pdb|3TI2|C Chain C, 1.90 Angstrom Resolution Crystal Structure Of N-Terminal
Domain 3- Phosphoshikimate 1-Carboxyvinyltransferase
From Vibrio Cholerae
pdb|3TI2|D Chain D, 1.90 Angstrom Resolution Crystal Structure Of N-Terminal
Domain 3- Phosphoshikimate 1-Carboxyvinyltransferase
From Vibrio Cholerae
Length = 228
Score = 174 bits (441), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 109/236 (46%), Positives = 137/236 (58%), Gaps = 8/236 (3%)
Query: 92 VTLPGSKSLSNRILLLAALSEGTTVVDNLLSSEDIHHMLDALKKLGLNVEEDFAMKRAIV 151
V LPGSKS+SNR LLLAAL+ GTT + NLL S+DI HML+AL KLG+N V
Sbjct: 1 VNLPGSKSVSNRALLLAALASGTTRLTNLLDSDDIRHMLNALTKLGVNYRLSADKTTCEV 60
Query: 152 EGCGGLFPLAKQQTGEIELFLGNAGTAMRPLTAAVTAAGGNLSYILDGVPRMRERPIGDL 211
EG G F T +ELFLGNAGTAMRPL AA+ G+ Y+L G PRM+ERPIG L
Sbjct: 61 EGLGQAF----HTTQPLELFLGNAGTAMRPLAAALCLGQGD--YVLTGEPRMKERPIGHL 114
Query: 212 VTGLKQLGADVDCILGTNCPPVRINXXXXXXXXXXXXXXXXXXQYXXXXXXXXXXXXGNV 271
V L+Q GA ++ + N PP+RI Q+ G V
Sbjct: 115 VDALRQAGAQIEYLEQENFPPLRIQ-GTGLQAGTVTIDGSISSQFLTAFLMSAPLAQGKV 173
Query: 272 EIEIIDKLISVPYVEMTLKLMERFGVFVEHSDSWDRFFIQGGQKYKSPGNAFVEGD 327
I+I+ +L+S PY+++TL +ME+FGV V + D + F I GQ Y SPG VEGD
Sbjct: 174 TIKIVGELVSKPYIDITLHIMEQFGVQVINHD-YQEFVIPAGQSYVSPGQFLVEGD 228
>pdb|4GFP|A Chain A, 2.7 Angstrom Resolution Structure Of 3-Phosphoshikimate 1-
Carboxyvinyltransferase (Aroa) From Coxiella Burnetii In
A Second Conformational State
Length = 462
Score = 139 bits (350), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 126/448 (28%), Positives = 205/448 (45%), Gaps = 24/448 (5%)
Query: 74 QSKASEIVLQPIREISGTVTLPGSKSLSNRILLLAALSEGTTVVDNLLSSEDIHHMLDAL 133
QS A + P + +SG + +PG KS+S+R +LLAA++EG T VD L D M+ AL
Sbjct: 21 QSNAMDYQTIPSQGLSGEICVPGDKSISHRAVLLAAIAEGQTQVDGFLMGADNLAMVSAL 80
Query: 134 KKLGLNVEEDFAMKRAIVEGCGGLFPLAKQQTGEIELFLGNAGTAMRPLTAAVTAAGGNL 193
+++G +++ +VEG G + Q L GN+GTA+R L+ + AG
Sbjct: 81 QQMGASIQVIEDENILVVEGVG----MTGLQAPPEALDCGNSGTAIRLLSGLL--AGQPF 134
Query: 194 SYILDGVPRMRERPIGDLVTGLKQLGADVDCILGTNCPPVRINXXXXXXXXXXXXXXXXX 253
+ +L G ++ RP+ ++ L +GA +D N PP++I
Sbjct: 135 NTVLTGDSSLQRRPMKRIIDPLTLMGAKIDST--GNVPPLKI-YGNPRLTGIHYQLPMAS 191
Query: 254 XQYXXXXXXXXXXXXGNVEIEIIDKLISVPYVEMTLKLMERFGVFVEHSDSWDRFFIQGG 313
Q G I P + T +L++ F ++ + GG
Sbjct: 192 AQVKSCLLLAGLYARGKTCITE-----PAPSRDHTERLLKHFHYTLQKDKQ--SICVSGG 244
Query: 314 QKYKSPGNAFVEGDASSASYFXXXXXXXXXXXXXEGCGTSSLQGDVKFAEVLEKMGAKVT 373
K K+ + + GD SSA++F C + +L+ MGA +
Sbjct: 245 GKLKA-NDISIPGDISSAAFFIVAATITPGSAIRL-CRVGVNPTRLGVINLLKMMGADIE 302
Query: 374 WTENSVTVTGPPRDPYGRK-HLRAVDVNMNKMP---DVAMTLAVVALFADGPTAIRDVAS 429
T + P D R L+ +D+ +++P D L + A A G T +RD A
Sbjct: 303 VTHYTEKNEEPTADITVRHARLKGIDIPPDQVPLTIDEFPVLLIAAAVAQGKTVLRDAAE 362
Query: 430 WRVKETERMIAICTELRKLGATVEEGPDYCVITPPEKLKVAAIDTYDDHRMAMAFSLAAC 489
RVKET+R+ A+ L+KLG E PD VI L+ +++YDDHR+AMAF++A
Sbjct: 363 LRVKETDRIAAMVDGLQKLGIAAESLPD-GVIIQGGTLEGGEVNSYDDHRIAMAFAVAGT 421
Query: 490 -ADVPVTIKDPSCTRKTFPDYFDVLDSV 516
A PV I++ + +FP++ ++ + V
Sbjct: 422 LAKGPVRIRNCDNVKTSFPNFVELANEV 449
>pdb|3ROI|A Chain A, 2.20 Angstrom Resolution Structure Of 3-Phosphoshikimate
1- Carboxyvinyltransferase (Aroa) From Coxiella Burnetii
pdb|3ROI|B Chain B, 2.20 Angstrom Resolution Structure Of 3-Phosphoshikimate
1- Carboxyvinyltransferase (Aroa) From Coxiella Burnetii
pdb|3SLH|A Chain A, 1.70 Angstrom Resolution Structure Of 3-Phosphoshikimate
1- Carboxyvinyltransferase (Aroa) From Coxiella Burnetii
In Complex With Shikimate-3-Phosphate And Glyphosate
pdb|3SLH|B Chain B, 1.70 Angstrom Resolution Structure Of 3-Phosphoshikimate
1- Carboxyvinyltransferase (Aroa) From Coxiella Burnetii
In Complex With Shikimate-3-Phosphate And Glyphosate
pdb|3SLH|C Chain C, 1.70 Angstrom Resolution Structure Of 3-Phosphoshikimate
1- Carboxyvinyltransferase (Aroa) From Coxiella Burnetii
In Complex With Shikimate-3-Phosphate And Glyphosate
pdb|3SLH|D Chain D, 1.70 Angstrom Resolution Structure Of 3-Phosphoshikimate
1- Carboxyvinyltransferase (Aroa) From Coxiella Burnetii
In Complex With Shikimate-3-Phosphate And Glyphosate
pdb|4EGR|A Chain A, 2.50 Angstrom Resolution Structure Of 3-Phosphoshikimate
1- Carboxyvinyltransferase (Aroa) From Coxiella Burnetii
In Complex With Phosphoenolpyruvate
pdb|4EGR|B Chain B, 2.50 Angstrom Resolution Structure Of 3-Phosphoshikimate
1- Carboxyvinyltransferase (Aroa) From Coxiella Burnetii
In Complex With Phosphoenolpyruvate
pdb|4EGR|C Chain C, 2.50 Angstrom Resolution Structure Of 3-Phosphoshikimate
1- Carboxyvinyltransferase (Aroa) From Coxiella Burnetii
In Complex With Phosphoenolpyruvate
pdb|4EGR|D Chain D, 2.50 Angstrom Resolution Structure Of 3-Phosphoshikimate
1- Carboxyvinyltransferase (Aroa) From Coxiella Burnetii
In Complex With Phosphoenolpyruvate
pdb|4EGR|E Chain E, 2.50 Angstrom Resolution Structure Of 3-Phosphoshikimate
1- Carboxyvinyltransferase (Aroa) From Coxiella Burnetii
In Complex With Phosphoenolpyruvate
pdb|4EGR|F Chain F, 2.50 Angstrom Resolution Structure Of 3-Phosphoshikimate
1- Carboxyvinyltransferase (Aroa) From Coxiella Burnetii
In Complex With Phosphoenolpyruvate
Length = 441
Score = 137 bits (345), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 123/438 (28%), Positives = 201/438 (45%), Gaps = 24/438 (5%)
Query: 84 PIREISGTVTLPGSKSLSNRILLLAALSEGTTVVDNLLSSEDIHHMLDALKKLGLNVEED 143
P + +SG + +PG KS+S+R +LLAA++EG T VD L D M+ AL+++G +++
Sbjct: 10 PSQGLSGEICVPGDKSISHRAVLLAAIAEGQTQVDGFLMGADNLAMVSALQQMGASIQVI 69
Query: 144 FAMKRAIVEGCGGLFPLAKQQTGEIELFLGNAGTAMRPLTAAVTAAGGNLSYILDGVPRM 203
+VEG G + Q L GN+GTA+R L+ + AG + +L G +
Sbjct: 70 EDENILVVEGVG----MTGLQAPPEALDCGNSGTAIRLLSGLL--AGQPFNTVLTGDSSL 123
Query: 204 RERPIGDLVTGLKQLGADVDCILGTNCPPVRINXXXXXXXXXXXXXXXXXXQYXXXXXXX 263
+ RP+ ++ L +GA +D N PP++I Q
Sbjct: 124 QRRPMKRIIDPLTLMGAKIDST--GNVPPLKI-YGNPRLTGIHYQLPMASAQVKSCLLLA 180
Query: 264 XXXXXGNVEIEIIDKLISVPYVEMTLKLMERFGVFVEHSDSWDRFFIQGGQKYKSPGNAF 323
G I P + T +L++ F ++ + GG K K+ +
Sbjct: 181 GLYARGKTCITE-----PAPSRDHTERLLKHFHYTLQKDKQ--SICVSGGGKLKA-NDIS 232
Query: 324 VEGDASSASYFXXXXXXXXXXXXXEGCGTSSLQGDVKFAEVLEKMGAKVTWTENSVTVTG 383
+ GD SSA++F C + +L+ MGA + T +
Sbjct: 233 IPGDISSAAFFIVAATITPGSAIRL-CRVGVNPTRLGVINLLKMMGADIEVTHYTEKNEE 291
Query: 384 PPRDPYGRK-HLRAVDVNMNKMP---DVAMTLAVVALFADGPTAIRDVASWRVKETERMI 439
P D R L+ +D+ +++P D L + A A G T +RD A RVKET+R+
Sbjct: 292 PTADITVRHARLKGIDIPPDQVPLTIDEFPVLLIAAAVAQGKTVLRDAAELRVKETDRIA 351
Query: 440 AICTELRKLGATVEEGPDYCVITPPEKLKVAAIDTYDDHRMAMAFSLAAC-ADVPVTIKD 498
A+ L+KLG E PD VI L+ +++YDDHR+AMAF++A A PV I++
Sbjct: 352 AMVDGLQKLGIAAESLPD-GVIIQGGTLEGGEVNSYDDHRIAMAFAVAGTLAKGPVRIRN 410
Query: 499 PSCTRKTFPDYFDVLDSV 516
+ +FP++ ++ + V
Sbjct: 411 CDNVKTSFPNFVELANEV 428
>pdb|1P88|A Chain A, Substrate-Induced Structural Changes To The Isolated N-
Terminal Domain Of 5-Enolpyruvylshikimate-3-Phosphate
Synthase
pdb|1P89|A Chain A, Substrate-Induced Structural Changes To The Isolated
N-Terminal Domain Of 5-Enolpyruvylshikimate-3-Phosphate
Synthase
Length = 216
Score = 135 bits (340), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 91/225 (40%), Positives = 125/225 (55%), Gaps = 9/225 (4%)
Query: 101 SNRILLLAALSEGTTVVDNLLSSEDIHHMLDALKKLGLNVEEDFAMKRAIVEGCGGLFPL 160
SNR LLLAAL+ G TV+ NLL S+D+ HML+AL LG++ R + G GG PL
Sbjct: 1 SNRALLLAALAHGKTVLTNLLDSDDVRHMLNALTALGVSYTLSADRTRCEIIGNGG--PL 58
Query: 161 AKQQTGEIELFLGNAGTAMRPLTAAVTAAGGNLSYILDGVPRMRERPIGDLVTGLKQLGA 220
+ G +ELFLGNAGTAMRPL AA+ ++ +L G PRM+ERPIG LV L+ GA
Sbjct: 59 HAE--GALELFLGNAGTAMRPLAAALCLGSNDI--VLTGEPRMKERPIGHLVDALRLGGA 114
Query: 221 DVDCILGTNCPPVRINXXXXXXXXXXXXXXXXXXQYXXXXXXXXXXXXGNVEIEIIDKLI 280
+ + N PP+R+ Q+ + I I L+
Sbjct: 115 KITYLEQENYPPLRLQ--GGFTGGNVDVDGSVSSQFLTALLMTAPLAPEDTVIRIKGDLV 172
Query: 281 SVPYVEMTLKLMERFGVFVEHSDSWDRFFIQGGQKYKSPGNAFVE 325
S PY+++TL LM+ FGV +E + + +F ++GGQ Y+SPG VE
Sbjct: 173 SKPYIDITLNLMKTFGVEIE-NQHYQQFVVKGGQSYQSPGTYLVE 216
>pdb|3TR1|A Chain A, Structure Of A 3-Phosphoshikimate
1-Carboxyvinyltransferase (Aroa) From Coxiella Burnetii
Length = 441
Score = 125 bits (313), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 123/440 (27%), Positives = 196/440 (44%), Gaps = 28/440 (6%)
Query: 84 PIREISGTVTLPGSKSLSNRILLLAALSEGTTVVDNLLSSEDIHHMLDALKKLGLNVEED 143
P + +SG + +PG KS+S+R +LLAA++EG T VD L D + AL++ G +++
Sbjct: 10 PSQGLSGEICVPGDKSISHRAVLLAAIAEGQTQVDGFLXGADNLAXVSALQQXGASIQVI 69
Query: 144 FAMKRAIVEGCG--GLFPLAKQQTGEIELFLGNAGTAMRPLTAAVTAAGGNLSYILDGVP 201
+VEG G GL Q L GN+GTA+R L+ + AG + +L G
Sbjct: 70 EDENILVVEGVGXTGL------QAPPEALDCGNSGTAIRLLSGLL--AGQPFNTVLTGDS 121
Query: 202 RMRERPIGDLVTGLKQLGADVDCILGTNCPPVRINXXXXXXXXXXXXXXXXXXQYXXXXX 261
++ RP ++ L GA +D N PP++I Q
Sbjct: 122 SLQRRPXKRIIDPLTLXGAKIDST--GNVPPLKI-YGNPRLTGIHYQLPXASAQVKSCLL 178
Query: 262 XXXXXXXGNVEIEIIDKLISVPYVEMTLKLMERFGVFVEHSDSWDRFFIQGGQKYKSPGN 321
G I P + T +L++ F ++ + GG K K+ +
Sbjct: 179 LAGLYARGKTCITE-----PAPSRDHTERLLKHFHYTLQKDKQS--ICVSGGGKLKA-ND 230
Query: 322 AFVEGDASSASYFXXXXXXXXXXXXXEGCGTSSLQGDVKFAEVLEKMGAKVTWTENSVTV 381
+ GD SSA++F C + +L+ GA + T +
Sbjct: 231 ISIPGDISSAAFFIVAATITPGSAIRL-CRVGVNPTRLGVINLLKXXGADIEVTHYTEKN 289
Query: 382 TGPPRDPYGRK-HLRAVDVNMNKMP---DVAMTLAVVALFADGPTAIRDVASWRVKETER 437
P D R L+ +D+ +++P D L + A A G T +RD A RVKET+R
Sbjct: 290 EEPTADITVRHARLKGIDIPPDQVPLTIDEFPVLLIAAAVAQGKTVLRDAAELRVKETDR 349
Query: 438 MIAICTELRKLGATVEEGPDYCVITPPEKLKVAAIDTYDDHRMAMAFSLAAC-ADVPVTI 496
+ A L+KLG E PD VI L+ +++YDDHR+A AF++A A PV I
Sbjct: 350 IAAXVDGLQKLGIAAESLPD-GVIIQGGTLEGGEVNSYDDHRIAXAFAVAGTLAKGPVRI 408
Query: 497 KDPSCTRKTFPDYFDVLDSV 516
++ + +FP++ ++ + V
Sbjct: 409 RNCDNVKTSFPNFVELANEV 428
>pdb|1RF4|A Chain A, Structural Studies Of Streptococcus Pneumoniae Epsp
Synthase, Tetrahedral Intermediate Bound State
pdb|1RF4|B Chain B, Structural Studies Of Streptococcus Pneumoniae Epsp
Synthase, Tetrahedral Intermediate Bound State
pdb|1RF4|C Chain C, Structural Studies Of Streptococcus Pneumoniae Epsp
Synthase, Tetrahedral Intermediate Bound State
pdb|1RF4|D Chain D, Structural Studies Of Streptococcus Pneumoniae Epsp
Synthase, Tetrahedral Intermediate Bound State
pdb|1RF5|A Chain A, Structural Studies Of Streptococcus Pneumoniae Epsp
Synthase In Unliganded State
pdb|1RF5|B Chain B, Structural Studies Of Streptococcus Pneumoniae Epsp
Synthase In Unliganded State
pdb|1RF5|C Chain C, Structural Studies Of Streptococcus Pneumoniae Epsp
Synthase In Unliganded State
pdb|1RF5|D Chain D, Structural Studies Of Streptococcus Pneumoniae Epsp
Synthase In Unliganded State
pdb|1RF6|A Chain A, Structural Studies Of Streptococcus Pneumoniae Epsp
Synthase In S3p-Glp Bound State
pdb|1RF6|B Chain B, Structural Studies Of Streptococcus Pneumoniae Epsp
Synthase In S3p-Glp Bound State
pdb|1RF6|C Chain C, Structural Studies Of Streptococcus Pneumoniae Epsp
Synthase In S3p-Glp Bound State
pdb|1RF6|D Chain D, Structural Studies Of Streptococcus Pneumoniae Epsp
Synthase In S3p-Glp Bound State
Length = 427
Score = 113 bits (282), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 108/440 (24%), Positives = 198/440 (45%), Gaps = 30/440 (6%)
Query: 85 IREISGTVTLPGSKSLSNRILLLAALSEGTTVVDNLLSSEDIHHMLDALKKLGLNVEEDF 144
IR + G + +PG KS+S+R ++ +L+EG T V ++L ED+ + + LG+ +E+
Sbjct: 7 IRHLHGIIRVPGDKSISHRSIIFGSLAEGETKVYDILRGEDVLSTMQVFRDLGVEIEDKD 66
Query: 145 AMKRAIVEGCGGLFPLAKQQTGEIELFLGNAGTAMRPLTAAVTAAGGNLSYILDGVPRMR 204
+ V+G G +A + + L +GN+GT++R ++ + AG + + G +
Sbjct: 67 GV--ITVQGVG----MAGLKAPQNALNMGNSGTSIRLISGVL--AGADFEVEMFGDDSLS 118
Query: 205 ERPIGDLVTGLKQLGADVDCILGTNCPPVRINXXXXXXXXXXXXXXXXXXQYXXXXXXXX 264
+RP+ + LK++G + + PP+R+ Q
Sbjct: 119 KRPMDRVTLPLKKMGVSISGQTERDLPPLRLK-GTKNLRPIHYELPIASAQVKSALMFAA 177
Query: 265 XXXXGNVEIEIIDKLISVPYVEMTLKLMERFGVFVEHSDSWDRFFIQGGQKYKSPGNAFV 324
G E II+K + + E ++++FG + S + +QG QK V
Sbjct: 178 LQAKG--ESVIIEKEYTRNHTE---DMLQQFGGHL--SVDGKKITVQGPQKLTGQ-KVVV 229
Query: 325 EGDASSASYFXXXXXXX-XXXXXXEGCGTSSLQGDVKFAEVLEKMGAKVTWTE-----NS 378
GD SSA+++ + G + + + +V+ MG K+ TE S
Sbjct: 230 PGDISSAAFWLVAGLIAPNSRLVLQNVGINETRTGI--IDVIRAMGGKLEITEIDPVAKS 287
Query: 379 VTVTGPPRDPYGRKHLRAVDVNMNKMPDVAMTLAVVALFADGPTAIRDVASWRVKETERM 438
T+ D G + A+ + ++ D +A++A A G T I+D +VKET+R+
Sbjct: 288 ATLIVESSDLKGTEICGAL---IPRLIDELPIIALLATQAQGVTVIKDAEELKVKETDRI 344
Query: 439 IAICTELRKLGATVEEGPDYCVITPPEKLKVAAIDTYDDHRMAMAFSLAA--CADVPVTI 496
+ L +GA + D +I L A ++T+ DHR+ M ++AA AD V +
Sbjct: 345 QVVADALNSMGADITPTADGMIIKGKSALHGARVNTFGDHRIGMMTAIAALLVADGEVEL 404
Query: 497 KDPSCTRKTFPDYFDVLDSV 516
++P +FD L+S+
Sbjct: 405 DRAEAINTSYPSFFDDLESL 424
>pdb|3RMT|A Chain A, Crystal Structure Of Putative
5-Enolpyruvoylshikimate-3-Phosphate Synthase From
Bacillus Halodurans C-125
pdb|3RMT|B Chain B, Crystal Structure Of Putative
5-Enolpyruvoylshikimate-3-Phosphate Synthase From
Bacillus Halodurans C-125
pdb|3RMT|C Chain C, Crystal Structure Of Putative
5-Enolpyruvoylshikimate-3-Phosphate Synthase From
Bacillus Halodurans C-125
pdb|3RMT|D Chain D, Crystal Structure Of Putative
5-Enolpyruvoylshikimate-3-Phosphate Synthase From
Bacillus Halodurans C-125
Length = 455
Score = 110 bits (274), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 117/443 (26%), Positives = 195/443 (44%), Gaps = 31/443 (6%)
Query: 81 VLQPIREISGTVTLPGSKSLSNRILLLAALSEGTTVVDNLLSSEDIHHMLDALKKLGLNV 140
V+ + + GT+ +PG KS+S+R ++ AL++GTT V+ L D + +KLG+++
Sbjct: 8 VIPHAKGLKGTIKVPGDKSISHRAVMFGALAKGTTTVEGFLPGADCLSTISCFQKLGVSI 67
Query: 141 EEDFAMKRAIVEGCG--GLFPLAKQQTGEIELFLGNAGTAMRPLTAAVTAAGGNLSYILD 198
E+ A +R V+G G GL ++ +I L +GN+GT R + ++ ++
Sbjct: 68 EQ--AEERVTVKGKGWDGL-----REPSDI-LDVGNSGTTTRLILGILSTL--PFHSVII 117
Query: 199 GVPRMRERPIGDLVTGLKQLGADVDCILGTNCPPVRINXXXXXXXXXXXXXXXXXXQYXX 258
G + +RP+ + LK +GA +D N P+ I Q
Sbjct: 118 GDESIGKRPMKRVTEPLKSMGAQIDGRDHGNLTPLSIRGGQLKGIDFHSPVASA--QMKS 175
Query: 259 XXXXXXXXXXGNVEIEIIDKLISVPYVEMTLKLMERFGVFVEHSDSWDRFFIQGGQKYKS 318
G + K + T +++E FGV +E I+GGQ
Sbjct: 176 AILLAGLRAEGKTSVTEPAK-----TRDHTERMLEAFGVNIEKDGLT--VSIEGGQMLTG 228
Query: 319 PGNAFVEGDASSASYFXXXXXXX-XXXXXXEGCGTSSLQGDVKFAEVLEKMGAKVTWTEN 377
+ V GD SSA++F G + + + EVL++MGA +
Sbjct: 229 Q-HVVVPGDISSAAFFLVAGAMVPHSRITLTNVGINPTRAGI--LEVLKQMGATLAMENE 285
Query: 378 SVTVTGPPRD-PYGRKHLRAVDVNMNKMP---DVAMTLAVVALFADGPTAIRDVASWRVK 433
V P D L+ V++ + +P D +AV+A A G T I+D +VK
Sbjct: 286 RVQGGEPVADLTIETSVLQGVEIGGDIIPRLIDEIPIIAVLATQASGRTVIKDAEELKVK 345
Query: 434 ETERMIAICTELRKLGATVEEGPDYCVITPPEKLKVA-AIDTYDDHRMA-MAFSLAACAD 491
ET R+ + +EL KLGA++ D +I P LK + ++ DHR+ A A+
Sbjct: 346 ETNRIDTVVSELTKLGASIHATDDGMIIEGPTPLKGGVTVSSHGDHRIGMAMAIAALLAE 405
Query: 492 VPVTIKDPSCTRKTFPDYFDVLD 514
PVT++ ++P +FD LD
Sbjct: 406 KPVTVEGTEAIAVSYPSFFDHLD 428
>pdb|2BJB|A Chain A, Mycobacterium Tuberculosis Epsp Synthase In Unliganded
State
Length = 462
Score = 105 bits (262), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 122/439 (27%), Positives = 189/439 (43%), Gaps = 48/439 (10%)
Query: 84 PIREISGTVTLPGSKSLSNRILLLAAL----SEGTTVVDNLLSSEDIHHMLDALKKLGLN 139
P+R TVT+PGSKS +NR L+LAAL G + + L S D MLDAL+ LGL
Sbjct: 12 PVRA---TVTVPGSKSQTNRALVLAALAAAQGRGASTISGALRSRDTELMLDALQTLGLR 68
Query: 140 VE---EDFAMKRAIVEGCGGLFPLAKQQTGEIELFLGNAGTAMR---PLTAAVTAAGGNL 193
V+ + + I G G + G AGT +R PL AA G++
Sbjct: 69 VDGVGSELTVSGRIEPGPGA------------RVDCGLAGTVLRFVPPL-----AALGSV 111
Query: 194 SYILDGVPRMRERPIGDLVTGLKQLGADVDCILGTNCPPVRINXXXXXXXXXXXXXXXXX 253
DG + R RPI L+ L++LG VD GT P R+
Sbjct: 112 PVTFDGDQQARGRPIAPLLDALRELGVAVD---GTGLP-FRVRGNGSLAGGTVAIDASAS 167
Query: 254 XQYXXXXXXXXXXXXGNVEIEII-DKLISVPYVEMTLKLMERFGVFVEHSDSWDRFFIQG 312
Q+ + ++ L S P++ MT ++ + GV ++ S +R+ ++
Sbjct: 168 SQFVSGLLLSAASFTDGLTVQHTGSSLPSAPHIAMTAAMLRQAGVDIDDSTP-NRWQVRP 226
Query: 313 GQKYKSPGNAFVEGDASSASYFXXXXXXXXXXXXXEGCGTSSLQGDVKFAEVLEKMGAKV 372
G + +E D ++A F G S+Q +L ++ A V
Sbjct: 227 GPVAARRWD--IEPDLTNAVAFLSAAVVSGGTVRITGWPRVSVQPADHILAILRQLNAVV 284
Query: 373 TWTENSVTVTGPPRDPYGRKHLRAVDVNMNKMPDVAMTLAVVALFADGPTAIR--DVASW 430
++S+ V GP DV++ + ++ ++A +A A + R +A
Sbjct: 285 IHADSSLEVRGP-------TGYDGFDVDLRAVGELTPSVAALAALASPGSVSRLSGIAHL 337
Query: 431 RVKETERMIAICTELRKLGATVEEGPDYCVITPPEKLKVAAIDTYDDHRMAMAFSLAACA 490
R ET+R+ A+ TE+ +LG T E PD VIT L+ Y DHRMAMA ++
Sbjct: 338 RGHETDRLAALSTEINRLGGTCRETPDGLVIT-ATPLRPGIWRAYADHRMAMAGAIIGLR 396
Query: 491 DVPVTIKDPSCTRKTFPDY 509
V + D + T KT P++
Sbjct: 397 VAGVEVDDIAATTKTLPEF 415
>pdb|2O0B|A Chain A, Mycobacterium Tuberculosis Epsp Synthase In Complex With
S3p (Partially Photolyzed)
pdb|2O0D|A Chain A, Mycobacterium Tuberculosis Epsp Synthase In Complex With
S3p
pdb|2O0E|A Chain A, Mycobacterium Tuberculosis Epsp Synthase In Complex With
S3p And Pep
pdb|2O0X|A Chain A, Mycobacterium Tuberculosis Epsp Synthase In Complex With
Intermediate
pdb|2O0Z|A Chain A, Mycobacterium Tuberculosis Epsp Synthase In Complex With
Product (Eps)
pdb|2O15|A Chain A, Mycobacterium Tuberculosis Epsp Synthase After Partial
Products Withdrawal
Length = 450
Score = 105 bits (261), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 122/439 (27%), Positives = 189/439 (43%), Gaps = 48/439 (10%)
Query: 84 PIREISGTVTLPGSKSLSNRILLLAAL----SEGTTVVDNLLSSEDIHHMLDALKKLGLN 139
P+R TVT+PGSKS +NR L+LAAL G + + L S D MLDAL+ LGL
Sbjct: 12 PVRA---TVTVPGSKSQTNRALVLAALAAAQGRGASTISGALRSRDTELMLDALQTLGLR 68
Query: 140 VE---EDFAMKRAIVEGCGGLFPLAKQQTGEIELFLGNAGTAMR---PLTAAVTAAGGNL 193
V+ + + I G G + G AGT +R PL AA G++
Sbjct: 69 VDGVGSELTVSGRIEPGPGA------------RVDCGLAGTVLRFVPPL-----AALGSV 111
Query: 194 SYILDGVPRMRERPIGDLVTGLKQLGADVDCILGTNCPPVRINXXXXXXXXXXXXXXXXX 253
DG + R RPI L+ L++LG VD GT P R+
Sbjct: 112 PVTFDGDQQARGRPIAPLLDALRELGVAVD---GTGLP-FRVRGNGSLAGGTVAIDASAS 167
Query: 254 XQYXXXXXXXXXXXXGNVEIEII-DKLISVPYVEMTLKLMERFGVFVEHSDSWDRFFIQG 312
Q+ + ++ L S P++ MT ++ + GV ++ S +R+ ++
Sbjct: 168 SQFVSGLLLSAASFTDGLTVQHTGSSLPSAPHIAMTAAMLRQAGVDIDDSTP-NRWQVRP 226
Query: 313 GQKYKSPGNAFVEGDASSASYFXXXXXXXXXXXXXEGCGTSSLQGDVKFAEVLEKMGAKV 372
G + +E D ++A F G S+Q +L ++ A V
Sbjct: 227 GPVAARRWD--IEPDLTNAVAFLSAAVVSGGTVRITGWPRVSVQPADHILAILRQLNAVV 284
Query: 373 TWTENSVTVTGPPRDPYGRKHLRAVDVNMNKMPDVAMTLAVVALFADGPTAIR--DVASW 430
++S+ V GP DV++ + ++ ++A +A A + R +A
Sbjct: 285 IHADSSLEVRGP-------TGYDGFDVDLRAVGELTPSVAALAALASPGSVSRLSGIAHL 337
Query: 431 RVKETERMIAICTELRKLGATVEEGPDYCVITPPEKLKVAAIDTYDDHRMAMAFSLAACA 490
R ET+R+ A+ TE+ +LG T E PD VIT L+ Y DHRMAMA ++
Sbjct: 338 RGHETDRLAALSTEINRLGGTCRETPDGLVIT-ATPLRPGIWRAYADHRMAMAGAIIGLR 396
Query: 491 DVPVTIKDPSCTRKTFPDY 509
V + D + T KT P++
Sbjct: 397 VAGVEVDDIAATTKTLPEF 415
>pdb|2GGD|A Chain A, Cp4 Epsp Synthase Ala100gly Liganded With S3p And
Glyphosate
Length = 455
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/144 (29%), Positives = 71/144 (49%), Gaps = 8/144 (5%)
Query: 88 ISGTVTLPGSKSLSNRILLLAALSEGTTVVDNLLSSEDIHHMLDALKKLGLNVEEDFAMK 147
+SGTV +PG KS+S+R + L+ G T + LL ED+ + A++ +G + ++
Sbjct: 18 LSGTVRIPGDKSISHRSFMFGGLASGETRITGLLEGEDVINTGKAMQAMGARIRKEG--D 75
Query: 148 RAIVEGCGGLFPLAKQQTGEIELFLGNAGTAMRPLTAAVTAAGGNLSYILDGVPRMRERP 207
I++G G LA E L GNAGT R V + ++I D + +RP
Sbjct: 76 TWIIDGVGNGGLLAP----EAPLDFGNAGTGCRLTMGLVGVYDFDSTFIGDA--SLTKRP 129
Query: 208 IGDLVTGLKQLGADVDCILGTNCP 231
+G ++ L+++G V G P
Sbjct: 130 MGRVLNPLREMGVQVKSEDGDRLP 153
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 53/99 (53%), Gaps = 7/99 (7%)
Query: 422 TAIRDVASWRVKETERMIAICTELRKLGATVEEGPDYCVI--TPPEK----LKVAAIDTY 475
T + + RVKE++R+ A+ L+ G +EG V+ P K AA+ T+
Sbjct: 342 TVMNGLEELRVKESDRLSAVANGLKLNGVDCDEGETSLVVRGRPDGKGLGNASGAAVATH 401
Query: 476 DDHRMAMAF-SLAACADVPVTIKDPSCTRKTFPDYFDVL 513
DHR+AM+F + ++ PVT+ D + +FP++ D++
Sbjct: 402 LDHRIAMSFLVMGLVSENPVTVDDATMIATSFPEFMDLM 440
>pdb|2PQD|A Chain A, A100g Cp4 Epsps Liganded With (R)-Difluoromethyl
Tetrahedral Reaction Intermediate Analog
Length = 445
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/144 (29%), Positives = 71/144 (49%), Gaps = 8/144 (5%)
Query: 88 ISGTVTLPGSKSLSNRILLLAALSEGTTVVDNLLSSEDIHHMLDALKKLGLNVEEDFAMK 147
+SGTV +PG KS+S+R + L+ G T + LL ED+ + A++ +G + ++
Sbjct: 13 LSGTVRIPGDKSISHRSFMFGGLASGETRITGLLEGEDVINTGKAMQAMGARIRKEG--D 70
Query: 148 RAIVEGCGGLFPLAKQQTGEIELFLGNAGTAMRPLTAAVTAAGGNLSYILDGVPRMRERP 207
I++G G LA E L GNAGT R V + ++I D + +RP
Sbjct: 71 TWIIDGVGNGGLLAP----EAPLDFGNAGTGCRLTMGLVGVYDFDSTFIGDA--SLTKRP 124
Query: 208 IGDLVTGLKQLGADVDCILGTNCP 231
+G ++ L+++G V G P
Sbjct: 125 MGRVLNPLREMGVQVKSEDGDRLP 148
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 53/99 (53%), Gaps = 7/99 (7%)
Query: 422 TAIRDVASWRVKETERMIAICTELRKLGATVEEGPDYCVI--TPPEK----LKVAAIDTY 475
T + + RVKE++R+ A+ L+ G +EG V+ P K AA+ T+
Sbjct: 337 TVMNGLEELRVKESDRLSAVANGLKLNGVDCDEGETSLVVRGRPDGKGLGNASGAAVATH 396
Query: 476 DDHRMAMAF-SLAACADVPVTIKDPSCTRKTFPDYFDVL 513
DHR+AM+F + ++ PVT+ D + +FP++ D++
Sbjct: 397 LDHRIAMSFLVMGLVSENPVTVDDATMIATSFPEFMDLM 435
>pdb|2PQB|A Chain A, Cp4 Epsps Liganded With (R)-Difluoromethyl Tetrahedral
Intermediate Analog
pdb|2PQC|A Chain A, Cp4 Epsps Liganded With (R)-Phosphonate Tetrahedral
Reaction Intermediate Analog
Length = 445
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/144 (29%), Positives = 70/144 (48%), Gaps = 8/144 (5%)
Query: 88 ISGTVTLPGSKSLSNRILLLAALSEGTTVVDNLLSSEDIHHMLDALKKLGLNVEEDFAMK 147
+SGTV +PG KS+S+R + L+ G T + LL ED+ + A++ +G + ++
Sbjct: 13 LSGTVRIPGDKSISHRSFMFGGLASGETRITGLLEGEDVINTGKAMQAMGARIRKEG--D 70
Query: 148 RAIVEGCGGLFPLAKQQTGEIELFLGNAGTAMRPLTAAVTAAGGNLSYILDGVPRMRERP 207
I++G G LA E L GNA T R V + ++I D + +RP
Sbjct: 71 TWIIDGVGNGGLLAP----EAPLDFGNAATGCRLTMGLVGVYDFDSTFIGDA--SLTKRP 124
Query: 208 IGDLVTGLKQLGADVDCILGTNCP 231
+G ++ L+++G V G P
Sbjct: 125 MGRVLNPLREMGVQVKSEDGDRLP 148
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 53/99 (53%), Gaps = 7/99 (7%)
Query: 422 TAIRDVASWRVKETERMIAICTELRKLGATVEEGPDYCVI--TPPEK----LKVAAIDTY 475
T + + RVKE++R+ A+ L+ G +EG V+ P K AA+ T+
Sbjct: 337 TVMNGLEELRVKESDRLSAVANGLKLNGVDCDEGETSLVVRGRPDGKGLGNASGAAVATH 396
Query: 476 DDHRMAMAF-SLAACADVPVTIKDPSCTRKTFPDYFDVL 513
DHR+AM+F + ++ PVT+ D + +FP++ D++
Sbjct: 397 LDHRIAMSFLVMGLVSENPVTVDDATMIATSFPEFMDLM 435
>pdb|2GG4|A Chain A, Cp4 Epsp Synthase (Unliganded)
pdb|2GG6|A Chain A, Cp4 Epsp Synthase Liganded With S3p
pdb|2GGA|A Chain A, Cp4 Epsp Synthase Liganded With S3p And Glyphosate
Length = 455
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/144 (29%), Positives = 70/144 (48%), Gaps = 8/144 (5%)
Query: 88 ISGTVTLPGSKSLSNRILLLAALSEGTTVVDNLLSSEDIHHMLDALKKLGLNVEEDFAMK 147
+SGTV +PG KS+S+R + L+ G T + LL ED+ + A++ +G + ++
Sbjct: 18 LSGTVRIPGDKSISHRSFMFGGLASGETRITGLLEGEDVINTGKAMQAMGARIRKEG--D 75
Query: 148 RAIVEGCGGLFPLAKQQTGEIELFLGNAGTAMRPLTAAVTAAGGNLSYILDGVPRMRERP 207
I++G G LA E L GNA T R V + ++I D + +RP
Sbjct: 76 TWIIDGVGNGGLLAP----EAPLDFGNAATGCRLTMGLVGVYDFDSTFIGDA--SLTKRP 129
Query: 208 IGDLVTGLKQLGADVDCILGTNCP 231
+G ++ L+++G V G P
Sbjct: 130 MGRVLNPLREMGVQVKSEDGDRLP 153
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 53/99 (53%), Gaps = 7/99 (7%)
Query: 422 TAIRDVASWRVKETERMIAICTELRKLGATVEEGPDYCVI--TPPEK----LKVAAIDTY 475
T + + RVKE++R+ A+ L+ G +EG V+ P K AA+ T+
Sbjct: 342 TVMNGLEELRVKESDRLSAVANGLKLNGVDCDEGETSLVVRGRPDGKGLGNASGAAVATH 401
Query: 476 DDHRMAMAF-SLAACADVPVTIKDPSCTRKTFPDYFDVL 513
DHR+AM+F + ++ PVT+ D + +FP++ D++
Sbjct: 402 LDHRIAMSFLVMGLVSENPVTVDDATMIATSFPEFMDLM 440
>pdb|3R38|A Chain A, 2.23 Angstrom Resolution Crystal Structure Of
Udp-N-Acetylglucosamine 1-Carboxyvinyltransferase (Mura)
From Listeria Monocytogenes Egd-E
Length = 454
Score = 35.4 bits (80), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 29/113 (25%), Positives = 53/113 (46%), Gaps = 19/113 (16%)
Query: 365 LEKMGAKVTWTENSVTVTGPPRDPYGRKHLRAVDVNMNKMP----DVAMTLAVVALFADG 420
LE+MG ++ EN + V GP + L+AVDV P D+ + V+ + ++G
Sbjct: 291 LEEMGVQIIEEENGIRVIGPDK-------LKAVDVKTMPHPGFPTDMQSQMMVIQMLSEG 343
Query: 421 PTAIRD-VASWRVKETERMIAICTELRKLGATVEEGPDYCVITPPEKLKVAAI 472
+ + + V R E E+R++ A ++ +I+ P KL+ A +
Sbjct: 344 TSIMTETVFENRFMHVE-------EMRRMNADMKIEGHSVIISGPAKLQGAEV 389
Score = 29.3 bits (64), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 37/129 (28%), Positives = 60/129 (46%), Gaps = 28/129 (21%)
Query: 101 SNRILLLAALSEGTTVVDNLLSSEDIHHMLDALKKLGLNVEEDFAMKRAIVEGCG----- 155
+ I++ A L+EGTTV++N+ +I + + L ++G A V G G
Sbjct: 191 TQNIMMAATLAEGTTVIENVAREPEIVDLANFLNQMG-----------ARVIGAGTEVIR 239
Query: 156 --GLFPLAKQQTGEIELFLGNAGTAMRPLTAAVTAAGGNLSYILDGVPRMRERPIGDLVT 213
G+ L + I + AGT M + AA+T GGN+ I D VP I L+
Sbjct: 240 IEGVKELTATEHSIIPDRI-EAGTFM--IAAAIT--GGNV-LIEDAVP----EHISSLIA 289
Query: 214 GLKQLGADV 222
L+++G +
Sbjct: 290 KLEEMGVQI 298
>pdb|3ISS|A Chain A, Crystal Structure Of Enolpyruvyl-Udp-Glcnac Synthase
(Mura):udp-N- Acetylmuramic Acid:phosphite From
Escherichia Coli
pdb|3ISS|B Chain B, Crystal Structure Of Enolpyruvyl-Udp-Glcnac Synthase
(Mura):udp-N- Acetylmuramic Acid:phosphite From
Escherichia Coli
pdb|3ISS|C Chain C, Crystal Structure Of Enolpyruvyl-Udp-Glcnac Synthase
(Mura):udp-N- Acetylmuramic Acid:phosphite From
Escherichia Coli
pdb|3ISS|D Chain D, Crystal Structure Of Enolpyruvyl-Udp-Glcnac Synthase
(Mura):udp-N- Acetylmuramic Acid:phosphite From
Escherichia Coli
pdb|3ISS|E Chain E, Crystal Structure Of Enolpyruvyl-Udp-Glcnac Synthase
(Mura):udp-N- Acetylmuramic Acid:phosphite From
Escherichia Coli
pdb|3ISS|F Chain F, Crystal Structure Of Enolpyruvyl-Udp-Glcnac Synthase
(Mura):udp-N- Acetylmuramic Acid:phosphite From
Escherichia Coli
pdb|3ISS|G Chain G, Crystal Structure Of Enolpyruvyl-Udp-Glcnac Synthase
(Mura):udp-N- Acetylmuramic Acid:phosphite From
Escherichia Coli
pdb|3ISS|H Chain H, Crystal Structure Of Enolpyruvyl-Udp-Glcnac Synthase
(Mura):udp-N- Acetylmuramic Acid:phosphite From
Escherichia Coli
pdb|3ISS|I Chain I, Crystal Structure Of Enolpyruvyl-Udp-Glcnac Synthase
(Mura):udp-N- Acetylmuramic Acid:phosphite From
Escherichia Coli
pdb|3ISS|J Chain J, Crystal Structure Of Enolpyruvyl-Udp-Glcnac Synthase
(Mura):udp-N- Acetylmuramic Acid:phosphite From
Escherichia Coli
pdb|3ISS|K Chain K, Crystal Structure Of Enolpyruvyl-Udp-Glcnac Synthase
(Mura):udp-N- Acetylmuramic Acid:phosphite From
Escherichia Coli
pdb|3ISS|L Chain L, Crystal Structure Of Enolpyruvyl-Udp-Glcnac Synthase
(Mura):udp-N- Acetylmuramic Acid:phosphite From
Escherichia Coli
Length = 418
Score = 35.4 bits (80), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 38/139 (27%), Positives = 62/139 (44%), Gaps = 16/139 (11%)
Query: 87 EISGTVTLPGSKSLSNRILLLAALSEGTTVVDNLLSSEDIHHMLDALKKLGLNVEEDFAM 146
++ G VT+ G+K+ + IL A L+E + N+ +D+ + L +LG VE D ++
Sbjct: 11 KLQGEVTISGAKNAALPILFAALLAEEPVEIQNVPKLKDVDTSMKLLSQLGAKVERDGSV 70
Query: 147 K---RAIVEGCGGLFPLAKQQTGEIELFLGNAGTAMRPLTAAVTAAGGNLSYILDGVPRM 203
R + C + L K I A+ PL A G L G +
Sbjct: 71 HIDARDVNVFCAP-YDLVKTMRASI--------WALGPLVARF----GQGQVSLPGGCTI 117
Query: 204 RERPIGDLVTGLKQLGADV 222
RP+ ++GL+QLGA +
Sbjct: 118 GARPVDLHISGLEQLGATI 136
Score = 32.7 bits (73), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 18/72 (25%), Positives = 38/72 (52%), Gaps = 1/72 (1%)
Query: 71 AEKQSKASEIVLQPIREISGTVTLPGSKSLSNRILLLAALSEGTTVVDNLLSSEDIHHML 130
A + +++ ++ + ++SG + S ++L ++EGTTVVD + + + +
Sbjct: 343 AHAEIESNTVICHGVEKLSGAQVMATDLRASASLVLAGCIAEGTTVVDRIYHIDRGYERI 402
Query: 131 -DALKKLGLNVE 141
D L+ LG N+E
Sbjct: 403 EDKLRALGANIE 414
>pdb|1A2N|A Chain A, Structure Of The C115a Mutant Of Mura Complexed With The
Fluorinated Analog Of The Reaction Tetrahedral
Intermediate
Length = 419
Score = 34.3 bits (77), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 37/139 (26%), Positives = 62/139 (44%), Gaps = 16/139 (11%)
Query: 87 EISGTVTLPGSKSLSNRILLLAALSEGTTVVDNLLSSEDIHHMLDALKKLGLNVEEDFAM 146
++ G VT+ G+K+ + IL A L+E + N+ +D+ + L +LG VE + ++
Sbjct: 11 KLQGEVTISGAKNAALPILFAALLAEEPVEIQNVPKLKDVDTSMKLLSQLGAKVERNGSV 70
Query: 147 K---RAIVEGCGGLFPLAKQQTGEIELFLGNAGTAMRPLTAAVTAAGGNLSYILDGVPRM 203
R + C + L K I A+ PL A G L G +
Sbjct: 71 HIDARDVNVFCAP-YDLVKTMRASI--------WALGPLVARF----GQGQVSLPGGATI 117
Query: 204 RERPIGDLVTGLKQLGADV 222
RP+ ++GL+QLGA +
Sbjct: 118 GARPVDLHISGLEQLGATI 136
Score = 32.7 bits (73), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 18/72 (25%), Positives = 38/72 (52%), Gaps = 1/72 (1%)
Query: 71 AEKQSKASEIVLQPIREISGTVTLPGSKSLSNRILLLAALSEGTTVVDNLLSSEDIHHML 130
A + +++ ++ + ++SG + S ++L ++EGTTVVD + + + +
Sbjct: 343 AHAEIESNTVICHGVEKLSGAQVMATDLRASASLVLAGCIAEGTTVVDRIYHIDRGYERI 402
Query: 131 -DALKKLGLNVE 141
D L+ LG N+E
Sbjct: 403 EDKLRALGANIE 414
>pdb|3SWE|A Chain A, Haemophilus Influenzae Mura In Complex With
Udp-N-Acetylmuramic Acid And Covalent Adduct Of Pep With
Cys117
Length = 424
Score = 33.9 bits (76), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 37/139 (26%), Positives = 64/139 (46%), Gaps = 16/139 (11%)
Query: 88 ISGTVTLPGSKSLSNRILLLAALSEGTTVVDNLLSSEDIHHMLDALKKLGLNVEED---- 143
+SG+V + G+K+ + IL A L+ + N+ +DI L L++LG+ V+ D
Sbjct: 12 LSGSVNISGAKNAALPILFAAILATEPVKLTNVPELKDIETTLKILRQLGVVVDRDATGA 71
Query: 144 FAMKRAIVEGCGGLFPLAKQQTGEIELFLGNAGTAMRPLTAAVTAAGGNLSYILDGVPRM 203
+ + + + L K I A+ PL A G +S L G +
Sbjct: 72 VLLDASNINHFTAPYELVKTMRASI--------WALAPLVARFHQ--GQVS--LPGGXSI 119
Query: 204 RERPIGDLVTGLKQLGADV 222
RP+ ++GL++LGAD+
Sbjct: 120 GARPVDLHISGLEKLGADI 138
>pdb|1UAE|A Chain A, Structure Of Udp-N-Acetylglucosamine Enolpyruvyl
Transferase
Length = 419
Score = 33.5 bits (75), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 37/139 (26%), Positives = 62/139 (44%), Gaps = 16/139 (11%)
Query: 87 EISGTVTLPGSKSLSNRILLLAALSEGTTVVDNLLSSEDIHHMLDALKKLGLNVEEDFAM 146
++ G VT+ G+K+ + IL A L+E + N+ +D+ + L +LG VE + ++
Sbjct: 11 KLQGEVTISGAKNAALPILFAALLAEEPVEIQNVPKLKDVDTSMKLLSQLGAKVERNGSV 70
Query: 147 K---RAIVEGCGGLFPLAKQQTGEIELFLGNAGTAMRPLTAAVTAAGGNLSYILDGVPRM 203
R + C + L K I A+ PL A G L G +
Sbjct: 71 HIDARDVNVFCAP-YDLVKTMRASI--------WALGPLVARF----GQGQVSLPGGCTI 117
Query: 204 RERPIGDLVTGLKQLGADV 222
RP+ ++GL+QLGA +
Sbjct: 118 GARPVDLHISGLEQLGATI 136
Score = 32.7 bits (73), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 18/72 (25%), Positives = 38/72 (52%), Gaps = 1/72 (1%)
Query: 71 AEKQSKASEIVLQPIREISGTVTLPGSKSLSNRILLLAALSEGTTVVDNLLSSEDIHHML 130
A + +++ ++ + ++SG + S ++L ++EGTTVVD + + + +
Sbjct: 343 AHAEIESNTVICHGVEKLSGAQVMATDLRASASLVLAGCIAEGTTVVDRIYHIDRGYERI 402
Query: 131 -DALKKLGLNVE 141
D L+ LG N+E
Sbjct: 403 EDKLRALGANIE 414
>pdb|2RL1|A Chain A, Crystal Structure Of Udp-N-Acetylglucosamine Enolpyruvyl
Transferase From Haemophilus Influenzae In Complex With
Udp-N-Acetylglucosamine
pdb|2RL2|A Chain A, Crystal Structure Of Udp-n-acetylglucosamine Enolpyruvyl
Transferase From Haemophilus Influenzae In Complex With
Udp-n-acetylglucosamine And Fosfomycin
Length = 424
Score = 33.5 bits (75), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 37/139 (26%), Positives = 64/139 (46%), Gaps = 16/139 (11%)
Query: 88 ISGTVTLPGSKSLSNRILLLAALSEGTTVVDNLLSSEDIHHMLDALKKLGLNVEED---- 143
+SG+V + G+K+ + IL A L+ + N+ +DI L L++LG+ V+ D
Sbjct: 12 LSGSVNISGAKNAALPILFAAILATEPVKLTNVPELKDIETTLKILRQLGVVVDRDATGA 71
Query: 144 FAMKRAIVEGCGGLFPLAKQQTGEIELFLGNAGTAMRPLTAAVTAAGGNLSYILDGVPRM 203
+ + + + L K I A+ PL A G +S L G +
Sbjct: 72 VLLDASNINHFTAPYELVKTMRASI--------WALAPLVARFHQ--GQVS--LPGGCSI 119
Query: 204 RERPIGDLVTGLKQLGADV 222
RP+ ++GL++LGAD+
Sbjct: 120 GARPVDLHISGLEKLGADI 138
>pdb|3SWD|A Chain A, E. Coli Mura In Complex With Udp-N-Acetylmuramic Acid And
Covalent Adduct Of Pep With Cys115
pdb|3SWD|B Chain B, E. Coli Mura In Complex With Udp-N-Acetylmuramic Acid And
Covalent Adduct Of Pep With Cys115
pdb|3SWD|C Chain C, E. Coli Mura In Complex With Udp-N-Acetylmuramic Acid And
Covalent Adduct Of Pep With Cys115
pdb|3SWD|D Chain D, E. Coli Mura In Complex With Udp-N-Acetylmuramic Acid And
Covalent Adduct Of Pep With Cys115
pdb|3SWD|E Chain E, E. Coli Mura In Complex With Udp-N-Acetylmuramic Acid And
Covalent Adduct Of Pep With Cys115
pdb|3SWD|F Chain F, E. Coli Mura In Complex With Udp-N-Acetylmuramic Acid And
Covalent Adduct Of Pep With Cys115
pdb|3SWD|G Chain G, E. Coli Mura In Complex With Udp-N-Acetylmuramic Acid And
Covalent Adduct Of Pep With Cys115
pdb|3SWD|H Chain H, E. Coli Mura In Complex With Udp-N-Acetylmuramic Acid And
Covalent Adduct Of Pep With Cys115
pdb|3SWD|I Chain I, E. Coli Mura In Complex With Udp-N-Acetylmuramic Acid And
Covalent Adduct Of Pep With Cys115
pdb|3SWD|J Chain J, E. Coli Mura In Complex With Udp-N-Acetylmuramic Acid And
Covalent Adduct Of Pep With Cys115
pdb|3SWD|K Chain K, E. Coli Mura In Complex With Udp-N-Acetylmuramic Acid And
Covalent Adduct Of Pep With Cys115
pdb|3SWD|L Chain L, E. Coli Mura In Complex With Udp-N-Acetylmuramic Acid And
Covalent Adduct Of Pep With Cys115
Length = 418
Score = 32.7 bits (73), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 37/139 (26%), Positives = 61/139 (43%), Gaps = 16/139 (11%)
Query: 87 EISGTVTLPGSKSLSNRILLLAALSEGTTVVDNLLSSEDIHHMLDALKKLGLNVEEDFAM 146
++ G VT+ G+K+ + IL A L+E + N+ +D+ + L +LG VE ++
Sbjct: 11 KLQGEVTISGAKNAALPILFAALLAEEPVEIQNVPKLKDVDTSMKLLSQLGAKVERXGSV 70
Query: 147 K---RAIVEGCGGLFPLAKQQTGEIELFLGNAGTAMRPLTAAVTAAGGNLSYILDGVPRM 203
R + C + L K I A+ PL A G L G +
Sbjct: 71 HIDARDVNVFCAP-YDLVKTMRASI--------WALGPLVARF----GQGQVSLPGGXTI 117
Query: 204 RERPIGDLVTGLKQLGADV 222
RP+ ++GL+QLGA +
Sbjct: 118 GARPVDLHISGLEQLGATI 136
Score = 32.7 bits (73), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 18/72 (25%), Positives = 38/72 (52%), Gaps = 1/72 (1%)
Query: 71 AEKQSKASEIVLQPIREISGTVTLPGSKSLSNRILLLAALSEGTTVVDNLLSSEDIHHML 130
A + +++ ++ + ++SG + S ++L ++EGTTVVD + + + +
Sbjct: 343 AHAEIESNTVICHGVEKLSGAQVMATDLRASASLVLAGCIAEGTTVVDRIYHIDRGYERI 402
Query: 131 -DALKKLGLNVE 141
D L+ LG N+E
Sbjct: 403 EDKLRALGANIE 414
>pdb|1NAW|A Chain A, Enolpyruvyl Transferase
pdb|1NAW|B Chain B, Enolpyruvyl Transferase
Length = 419
Score = 32.7 bits (73), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 62/141 (43%), Gaps = 15/141 (10%)
Query: 84 PIREISGTVTLPGSKSLSNRILLLAALSEGTTVVDNLLSSEDIHHMLDALKKLGLNVEED 143
P R + G VT+ G+K+ + IL A L+E + N+ +DI + L +LG VE +
Sbjct: 9 PTR-LQGEVTISGAKNAALPILFAALLAEEPVEIQNVPKLKDIDTTMKLLTQLGTKVERN 67
Query: 144 FA--MKRAIVEGCGGLFPLAKQQTGEIELFLGNAGTAMRPLTAAVTAAGGNLSYILDGVP 201
+ + + V + L K I A+ PL A G L G
Sbjct: 68 GSVWIDASNVNNFSAPYDLVKTMRASI--------WALGPLVARF----GQGQVSLPGGC 115
Query: 202 RMRERPIGDLVTGLKQLGADV 222
+ RP+ + GL++LGA++
Sbjct: 116 AIGARPVDLHIFGLEKLGAEI 136
Score = 32.3 bits (72), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 18/72 (25%), Positives = 38/72 (52%), Gaps = 1/72 (1%)
Query: 71 AEKQSKASEIVLQPIREISGTVTLPGSKSLSNRILLLAALSEGTTVVDNLLSSEDIHHML 130
A + +++ ++ + ++SG + S ++L ++EGTTVVD + + + +
Sbjct: 343 AHAEIESNTVICHGVEKLSGAQVMATDLRASASLVLAGCIAEGTTVVDRIYHIDRGYERI 402
Query: 131 -DALKKLGLNVE 141
D L+ LG N+E
Sbjct: 403 EDKLRALGANIE 414
>pdb|3KQJ|A Chain A, Mura Binary Complex With Udp-N-Acetylglucosamine
pdb|3KR6|A Chain A, Mura Dead-End Complex With Fosfomycin
Length = 419
Score = 32.7 bits (73), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 18/72 (25%), Positives = 38/72 (52%), Gaps = 1/72 (1%)
Query: 71 AEKQSKASEIVLQPIREISGTVTLPGSKSLSNRILLLAALSEGTTVVDNLLSSEDIHHML 130
A + +++ ++ + ++SG + S ++L ++EGTTVVD + + + +
Sbjct: 343 AHAEIESNTVICHGVEKLSGAQVMATDLRASASLVLAGCIAEGTTVVDRIYHIDRGYERI 402
Query: 131 -DALKKLGLNVE 141
D L+ LG N+E
Sbjct: 403 EDKLRALGANIE 414
Score = 32.7 bits (73), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 37/139 (26%), Positives = 61/139 (43%), Gaps = 16/139 (11%)
Query: 87 EISGTVTLPGSKSLSNRILLLAALSEGTTVVDNLLSSEDIHHMLDALKKLGLNVEEDFAM 146
++ G VT+ G+K+ + IL A L+E + N+ +D+ + L +LG VE ++
Sbjct: 11 KLQGEVTISGAKNAALPILFAALLAEEPVEIQNVPKLKDVDTSMKLLSQLGAKVERXGSV 70
Query: 147 K---RAIVEGCGGLFPLAKQQTGEIELFLGNAGTAMRPLTAAVTAAGGNLSYILDGVPRM 203
R + C + L K I A+ PL A G L G +
Sbjct: 71 HIDARDVNVFCAP-YDLVKTMRASI--------WALGPLVARF----GQGQVSLPGGCTI 117
Query: 204 RERPIGDLVTGLKQLGADV 222
RP+ ++GL+QLGA +
Sbjct: 118 GARPVDLHISGLEQLGATI 136
>pdb|2Z2C|A Chain A, Mura Inhibited By Unag-Cnicin Adduct
pdb|2Z2C|B Chain B, Mura Inhibited By Unag-Cnicin Adduct
pdb|2Z2C|C Chain C, Mura Inhibited By Unag-Cnicin Adduct
pdb|2Z2C|D Chain D, Mura Inhibited By Unag-Cnicin Adduct
Length = 423
Score = 32.7 bits (73), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 18/72 (25%), Positives = 38/72 (52%), Gaps = 1/72 (1%)
Query: 71 AEKQSKASEIVLQPIREISGTVTLPGSKSLSNRILLLAALSEGTTVVDNLLSSEDIHHML 130
A + +++ ++ + ++SG + S ++L ++EGTTVVD + + + +
Sbjct: 343 AHAEIESNTVICHGVEKLSGAQVMATDLRASASLVLAGCIAEGTTVVDRIYHIDRGYERI 402
Query: 131 -DALKKLGLNVE 141
D L+ LG N+E
Sbjct: 403 EDKLRALGANIE 414
Score = 32.3 bits (72), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 37/139 (26%), Positives = 61/139 (43%), Gaps = 16/139 (11%)
Query: 87 EISGTVTLPGSKSLSNRILLLAALSEGTTVVDNLLSSEDIHHMLDALKKLGLNVEEDFAM 146
++ G VT+ G+K+ + IL A L+E + N+ +D+ + L +LG VE ++
Sbjct: 11 KLQGEVTISGAKNAALPILFAALLAEEPVEIQNVPKLKDVDTSMKLLSQLGAKVERXGSV 70
Query: 147 K---RAIVEGCGGLFPLAKQQTGEIELFLGNAGTAMRPLTAAVTAAGGNLSYILDGVPRM 203
R + C + L K I A+ PL A G L G +
Sbjct: 71 HIDARDVNVFCAP-YDLVKTMRASI--------WALGPLVARF----GQGQVSLPGGCTI 117
Query: 204 RERPIGDLVTGLKQLGADV 222
RP+ ++GL+QLGA +
Sbjct: 118 GARPVDLHISGLEQLGATI 136
>pdb|1EJC|A Chain A, Crystal Structure Of Unliganded Mura (Type2)
pdb|1EJD|A Chain A, Crystal Structure Of Unliganded Mura (Type1)
pdb|1EJD|B Chain B, Crystal Structure Of Unliganded Mura (Type1)
pdb|1EYN|A Chain A, Structure Of Mura Liganded With The Extrinsic Fluorescence
Probe Ans
pdb|1YBG|A Chain A, Mura Inhibited By A Derivative Of 5-Sulfonoxy-Anthranilic
Acid
pdb|1YBG|B Chain B, Mura Inhibited By A Derivative Of 5-Sulfonoxy-Anthranilic
Acid
pdb|1YBG|C Chain C, Mura Inhibited By A Derivative Of 5-Sulfonoxy-Anthranilic
Acid
pdb|1YBG|D Chain D, Mura Inhibited By A Derivative Of 5-Sulfonoxy-Anthranilic
Acid
pdb|3KQA|A Chain A, Mura Dead-End Complex With Terreic Acid
pdb|3KQA|B Chain B, Mura Dead-End Complex With Terreic Acid
pdb|3KQA|C Chain C, Mura Dead-End Complex With Terreic Acid
pdb|3KQA|D Chain D, Mura Dead-End Complex With Terreic Acid
pdb|3LTH|A Chain A, E. Cloacae Mura Dead-End Complex With Unag And Fosfomycin
pdb|3SPB|A Chain A, Unliganded E. Cloacae Mura
pdb|3SPB|B Chain B, Unliganded E. Cloacae Mura
pdb|3SPB|C Chain C, Unliganded E. Cloacae Mura
pdb|3SPB|D Chain D, Unliganded E. Cloacae Mura
pdb|3SWQ|A Chain A, E. Cloacae Mura In Complex With Enolpyruvyl-Unag
pdb|3UPK|A Chain A, E. Cloacae Mura In Complex With Unag
Length = 419
Score = 32.3 bits (72), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 18/72 (25%), Positives = 38/72 (52%), Gaps = 1/72 (1%)
Query: 71 AEKQSKASEIVLQPIREISGTVTLPGSKSLSNRILLLAALSEGTTVVDNLLSSEDIHHML 130
A + +++ ++ + ++SG + S ++L ++EGTTVVD + + + +
Sbjct: 343 AHAEIESNTVICHGVEKLSGAQVMATDLRASASLVLAGCIAEGTTVVDRIYHIDRGYERI 402
Query: 131 -DALKKLGLNVE 141
D L+ LG N+E
Sbjct: 403 EDKLRALGANIE 414
Score = 32.0 bits (71), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 61/141 (43%), Gaps = 15/141 (10%)
Query: 84 PIREISGTVTLPGSKSLSNRILLLAALSEGTTVVDNLLSSEDIHHMLDALKKLGLNVEED 143
P R + G VT+ G+K+ + IL A L+E + N+ +DI + L +LG VE
Sbjct: 9 PTR-LQGEVTISGAKNAALPILFAALLAEEPVEIQNVPKLKDIDTTMKLLTQLGTKVERX 67
Query: 144 FA--MKRAIVEGCGGLFPLAKQQTGEIELFLGNAGTAMRPLTAAVTAAGGNLSYILDGVP 201
+ + + V + L K I A+ PL A G L G
Sbjct: 68 GSVWIDASNVNNFSAPYDLVKTMRASI--------WALGPLVARF----GQGQVSLPGGC 115
Query: 202 RMRERPIGDLVTGLKQLGADV 222
+ RP+ + GL++LGA++
Sbjct: 116 AIGARPVDLHIFGLEKLGAEI 136
>pdb|1Q3G|A Chain A, Mura (Asp305ala) Liganded With Tetrahedral Reaction
Intermediate
pdb|1Q3G|B Chain B, Mura (Asp305ala) Liganded With Tetrahedral Reaction
Intermediate
pdb|1Q3G|C Chain C, Mura (Asp305ala) Liganded With Tetrahedral Reaction
Intermediate
pdb|1Q3G|D Chain D, Mura (Asp305ala) Liganded With Tetrahedral Reaction
Intermediate
pdb|1Q3G|E Chain E, Mura (Asp305ala) Liganded With Tetrahedral Reaction
Intermediate
pdb|1Q3G|F Chain F, Mura (Asp305ala) Liganded With Tetrahedral Reaction
Intermediate
pdb|1Q3G|G Chain G, Mura (Asp305ala) Liganded With Tetrahedral Reaction
Intermediate
pdb|1Q3G|H Chain H, Mura (Asp305ala) Liganded With Tetrahedral Reaction
Intermediate
pdb|1Q3G|I Chain I, Mura (Asp305ala) Liganded With Tetrahedral Reaction
Intermediate
pdb|1Q3G|J Chain J, Mura (Asp305ala) Liganded With Tetrahedral Reaction
Intermediate
pdb|1Q3G|K Chain K, Mura (Asp305ala) Liganded With Tetrahedral Reaction
Intermediate
pdb|1Q3G|L Chain L, Mura (Asp305ala) Liganded With Tetrahedral Reaction
Intermediate
pdb|1Q3G|W Chain W, Mura (Asp305ala) Liganded With Tetrahedral Reaction
Intermediate
pdb|1Q3G|X Chain X, Mura (Asp305ala) Liganded With Tetrahedral Reaction
Intermediate
pdb|1Q3G|Y Chain Y, Mura (Asp305ala) Liganded With Tetrahedral Reaction
Intermediate
pdb|1Q3G|Z Chain Z, Mura (Asp305ala) Liganded With Tetrahedral Reaction
Intermediate
Length = 419
Score = 32.3 bits (72), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 18/72 (25%), Positives = 38/72 (52%), Gaps = 1/72 (1%)
Query: 71 AEKQSKASEIVLQPIREISGTVTLPGSKSLSNRILLLAALSEGTTVVDNLLSSEDIHHML 130
A + +++ ++ + ++SG + S ++L ++EGTTVVD + + + +
Sbjct: 343 AHAEIESNTVICHGVEKLSGAQVMATDLRASASLVLAGCIAEGTTVVDRIYHIDRGYERI 402
Query: 131 -DALKKLGLNVE 141
D L+ LG N+E
Sbjct: 403 EDKLRALGANIE 414
Score = 31.6 bits (70), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 61/141 (43%), Gaps = 15/141 (10%)
Query: 84 PIREISGTVTLPGSKSLSNRILLLAALSEGTTVVDNLLSSEDIHHMLDALKKLGLNVEED 143
P R + G VT+ G+K+ + IL A L+E + N+ +DI + L +LG VE
Sbjct: 9 PTR-LQGEVTISGAKNAALPILFAALLAEEPVEIQNVPKLKDIDTTMKLLTQLGTKVERX 67
Query: 144 FA--MKRAIVEGCGGLFPLAKQQTGEIELFLGNAGTAMRPLTAAVTAAGGNLSYILDGVP 201
+ + + V + L K I A+ PL A G L G
Sbjct: 68 GSVWIDASNVNNFSAPYDLVKTMRASI--------WALGPLVARF----GQGQVSLPGGC 115
Query: 202 RMRERPIGDLVTGLKQLGADV 222
+ RP+ + GL++LGA++
Sbjct: 116 AIGARPVDLHIFGLEKLGAEI 136
>pdb|1DLG|A Chain A, Crystal Structure Of The C115s Enterobacter Cloacae Mura
In The Un- Liganded State
pdb|1DLG|B Chain B, Crystal Structure Of The C115s Enterobacter Cloacae Mura
In The Un- Liganded State
pdb|1RYW|A Chain A, C115s Mura Liganded With Reaction Products
pdb|1RYW|B Chain B, C115s Mura Liganded With Reaction Products
pdb|1RYW|C Chain C, C115s Mura Liganded With Reaction Products
pdb|1RYW|D Chain D, C115s Mura Liganded With Reaction Products
pdb|1RYW|E Chain E, C115s Mura Liganded With Reaction Products
pdb|1RYW|F Chain F, C115s Mura Liganded With Reaction Products
pdb|1RYW|G Chain G, C115s Mura Liganded With Reaction Products
pdb|1RYW|H Chain H, C115s Mura Liganded With Reaction Products
Length = 419
Score = 32.3 bits (72), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 61/141 (43%), Gaps = 15/141 (10%)
Query: 84 PIREISGTVTLPGSKSLSNRILLLAALSEGTTVVDNLLSSEDIHHMLDALKKLGLNVEED 143
P R + G VT+ G+K+ + IL A L+E + N+ +DI + L +LG VE
Sbjct: 9 PTR-LQGEVTISGAKNAALPILFAALLAEEPVEIQNVPKLKDIDTTMKLLTQLGTKVERX 67
Query: 144 FA--MKRAIVEGCGGLFPLAKQQTGEIELFLGNAGTAMRPLTAAVTAAGGNLSYILDGVP 201
+ + + V + L K I A+ PL A G L G
Sbjct: 68 GSVWIDASNVNNFSAPYDLVKTMRASI--------WALGPLVARF----GQGQVSLPGGS 115
Query: 202 RMRERPIGDLVTGLKQLGADV 222
+ RP+ + GL++LGA++
Sbjct: 116 AIGARPVDLHIFGLEKLGAEI 136
Score = 32.3 bits (72), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 18/72 (25%), Positives = 38/72 (52%), Gaps = 1/72 (1%)
Query: 71 AEKQSKASEIVLQPIREISGTVTLPGSKSLSNRILLLAALSEGTTVVDNLLSSEDIHHML 130
A + +++ ++ + ++SG + S ++L ++EGTTVVD + + + +
Sbjct: 343 AHAEIESNTVICHGVEKLSGAQVMATDLRASASLVLAGCIAEGTTVVDRIYHIDRGYERI 402
Query: 131 -DALKKLGLNVE 141
D L+ LG N+E
Sbjct: 403 EDKLRALGANIE 414
>pdb|3VCY|A Chain A, Structure Of Mura (Udp-N-Acetylglucosamine Enolpyruvyl
Transferase), From Vibrio Fischeri In Complex With
Substrate Udp-N- Acetylglucosamine And The Drug
Fosfomycin.
pdb|3VCY|B Chain B, Structure Of Mura (Udp-N-Acetylglucosamine Enolpyruvyl
Transferase), From Vibrio Fischeri In Complex With
Substrate Udp-N- Acetylglucosamine And The Drug
Fosfomycin.
pdb|3VCY|C Chain C, Structure Of Mura (Udp-N-Acetylglucosamine Enolpyruvyl
Transferase), From Vibrio Fischeri In Complex With
Substrate Udp-N- Acetylglucosamine And The Drug
Fosfomycin.
pdb|3VCY|D Chain D, Structure Of Mura (Udp-N-Acetylglucosamine Enolpyruvyl
Transferase), From Vibrio Fischeri In Complex With
Substrate Udp-N- Acetylglucosamine And The Drug
Fosfomycin
Length = 430
Score = 32.3 bits (72), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 37/140 (26%), Positives = 62/140 (44%), Gaps = 16/140 (11%)
Query: 86 REISGTVTLPGSKSLSNRILLLAALSEGTTVVDNLLSSEDIHHMLDALKKLGLNVEEDFA 145
+ +SG VT+ G+K+ + IL + L+E V N+ D+ ++ LK+LG V + +
Sbjct: 11 KPLSGEVTISGAKNAALPILFASLLAEEPVEVANVPKLRDVDTTMELLKRLGAEVSRNGS 70
Query: 146 MK---RAIVEGCGGLFPLAKQQTGEIELFLGNAGTAMRPLTAAVTAAGGNLSYILDGVPR 202
+ + + C + L K I A+ PL A G L G
Sbjct: 71 VHIDASGVNDFCAP-YDLVKTMRASI--------WALGPLVARF----GKGQVSLPGGCA 117
Query: 203 MRERPIGDLVTGLKQLGADV 222
+ RP+ + GL+QLGA +
Sbjct: 118 IGARPVDLHIHGLEQLGATI 137
>pdb|3V4T|A Chain A, E. Cloacae C115d Mura Liganded With Unag
pdb|3V4T|B Chain B, E. Cloacae C115d Mura Liganded With Unag
pdb|3V4T|C Chain C, E. Cloacae C115d Mura Liganded With Unag
pdb|3V4T|D Chain D, E. Cloacae C115d Mura Liganded With Unag
pdb|3V4T|E Chain E, E. Cloacae C115d Mura Liganded With Unag
pdb|3V4T|F Chain F, E. Cloacae C115d Mura Liganded With Unag
pdb|3V4T|G Chain G, E. Cloacae C115d Mura Liganded With Unag
pdb|3V4T|H Chain H, E. Cloacae C115d Mura Liganded With Unag
pdb|3V5V|A Chain A, Unliganded E.Cloacae C115d Mura
pdb|3V5V|B Chain B, Unliganded E.Cloacae C115d Mura
pdb|3V5V|C Chain C, Unliganded E.Cloacae C115d Mura
pdb|3V5V|D Chain D, Unliganded E.Cloacae C115d Mura
Length = 419
Score = 32.3 bits (72), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 18/72 (25%), Positives = 38/72 (52%), Gaps = 1/72 (1%)
Query: 71 AEKQSKASEIVLQPIREISGTVTLPGSKSLSNRILLLAALSEGTTVVDNLLSSEDIHHML 130
A + +++ ++ + ++SG + S ++L ++EGTTVVD + + + +
Sbjct: 343 AHAEIESNTVICHGVEKLSGAQVMATDLRASASLVLAGCIAEGTTVVDRIYHIDRGYERI 402
Query: 131 -DALKKLGLNVE 141
D L+ LG N+E
Sbjct: 403 EDKLRALGANIE 414
Score = 32.3 bits (72), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 61/141 (43%), Gaps = 15/141 (10%)
Query: 84 PIREISGTVTLPGSKSLSNRILLLAALSEGTTVVDNLLSSEDIHHMLDALKKLGLNVEED 143
P R + G VT+ G+K+ + IL A L+E + N+ +DI + L +LG VE
Sbjct: 9 PTR-LQGEVTISGAKNAALPILFAALLAEEPVEIQNVPKLKDIDTTMKLLTQLGTKVERX 67
Query: 144 FA--MKRAIVEGCGGLFPLAKQQTGEIELFLGNAGTAMRPLTAAVTAAGGNLSYILDGVP 201
+ + + V + L K I A+ PL A G L G
Sbjct: 68 GSVWIDASNVNNFSAPYDLVKTMRASI--------WALGPLVARF----GQGQVSLPGGD 115
Query: 202 RMRERPIGDLVTGLKQLGADV 222
+ RP+ + GL++LGA++
Sbjct: 116 AIGARPVDLHIFGLEKLGAEI 136
>pdb|3SWA|A Chain A, E. Cloacae Mura R120a Complex With Unag And Covalent
Adduct Of Pep With Cys115
pdb|3SWA|B Chain B, E. Cloacae Mura R120a Complex With Unag And Covalent
Adduct Of Pep With Cys115
Length = 419
Score = 32.3 bits (72), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 18/72 (25%), Positives = 38/72 (52%), Gaps = 1/72 (1%)
Query: 71 AEKQSKASEIVLQPIREISGTVTLPGSKSLSNRILLLAALSEGTTVVDNLLSSEDIHHML 130
A + +++ ++ + ++SG + S ++L ++EGTTVVD + + + +
Sbjct: 343 AHAEIESNTVICHGVEKLSGAQVMATDLRASASLVLAGCIAEGTTVVDRIYHIDRGYERI 402
Query: 131 -DALKKLGLNVE 141
D L+ LG N+E
Sbjct: 403 EDKLRALGANIE 414
Score = 30.4 bits (67), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 31/58 (53%), Gaps = 1/58 (1%)
Query: 84 PIREISGTVTLPGSKSLSNRILLLAALSEGTTVVDNLLSSEDIHHMLDALKKLGLNVE 141
P R + G VT+ G+K+ + IL A L+E + N+ +DI + L +LG VE
Sbjct: 9 PTR-LQGEVTISGAKNAALPILFAALLAEEPVEIQNVPKLKDIDTTMKLLTQLGTKVE 65
>pdb|3SU9|A Chain A, E. Cloacae Mura In Complex With Udp-N-Acetylmuramic Acid
And Covalent Adduct Of Pep With Cys115
pdb|3SWI|A Chain A, E. Cloacae Mura In Complex With
Enolpyruvyl-Udp-N-Acetylgalactosamine And Covalent
Adduct Of Pep With Cys115
Length = 419
Score = 32.3 bits (72), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 18/72 (25%), Positives = 38/72 (52%), Gaps = 1/72 (1%)
Query: 71 AEKQSKASEIVLQPIREISGTVTLPGSKSLSNRILLLAALSEGTTVVDNLLSSEDIHHML 130
A + +++ ++ + ++SG + S ++L ++EGTTVVD + + + +
Sbjct: 343 AHAEIESNTVICHGVEKLSGAQVMATDLRASASLVLAGCIAEGTTVVDRIYHIDRGYERI 402
Query: 131 -DALKKLGLNVE 141
D L+ LG N+E
Sbjct: 403 EDKLRALGANIE 414
Score = 32.3 bits (72), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 61/141 (43%), Gaps = 15/141 (10%)
Query: 84 PIREISGTVTLPGSKSLSNRILLLAALSEGTTVVDNLLSSEDIHHMLDALKKLGLNVEED 143
P R + G VT+ G+K+ + IL A L+E + N+ +DI + L +LG VE
Sbjct: 9 PTR-LQGEVTISGAKNAALPILFAALLAEEPVEIQNVPKLKDIDTTMKLLTQLGTKVERX 67
Query: 144 FA--MKRAIVEGCGGLFPLAKQQTGEIELFLGNAGTAMRPLTAAVTAAGGNLSYILDGVP 201
+ + + V + L K I A+ PL A G L G
Sbjct: 68 GSVWIDASNVNNFSAPYDLVKTMRASI--------WALGPLVARF----GQGQVSLPGGX 115
Query: 202 RMRERPIGDLVTGLKQLGADV 222
+ RP+ + GL++LGA++
Sbjct: 116 AIGARPVDLHIFGLEKLGAEI 136
>pdb|2X3H|A Chain A, Coliphage K5a Lyase
pdb|2X3H|B Chain B, Coliphage K5a Lyase
pdb|2X3H|C Chain C, Coliphage K5a Lyase
Length = 542
Score = 31.2 bits (69), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 16/46 (34%), Positives = 24/46 (52%), Gaps = 1/46 (2%)
Query: 131 DALKKLGLNVE-EDFAMKRAIVEGCGGLFPLAKQQTGEIELFLGNA 175
DA + G+ VE D + ++ GC G L ++QT I F+G A
Sbjct: 314 DARQAHGVTVEGSDNVINNVLMSGCDGTNSLGQRQTATIARFIGTA 359
>pdb|3SG1|A Chain A, 2.6 Angstrom Crystal Structure Of Udp-N-Acetylglucosamine
1- Carboxyvinyltransferase 1 (Mura1) From Bacillus
Anthracis
pdb|3SG1|B Chain B, 2.6 Angstrom Crystal Structure Of Udp-N-Acetylglucosamine
1- Carboxyvinyltransferase 1 (Mura1) From Bacillus
Anthracis
pdb|3SG1|C Chain C, 2.6 Angstrom Crystal Structure Of Udp-N-Acetylglucosamine
1- Carboxyvinyltransferase 1 (Mura1) From Bacillus
Anthracis
pdb|3SG1|D Chain D, 2.6 Angstrom Crystal Structure Of Udp-N-Acetylglucosamine
1- Carboxyvinyltransferase 1 (Mura1) From Bacillus
Anthracis
Length = 458
Score = 30.0 bits (66), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 29/117 (24%), Positives = 48/117 (41%), Gaps = 19/117 (16%)
Query: 365 LEKMGAKVTWTENSVTVTGPPRDPYGRKHLRAVDVNMNKMP----DVAMTLAVVALFADG 420
+E+MG K+ V V GP + L+AVD+ P D+ + + L ADG
Sbjct: 292 MEEMGVKIIEENEGVRVIGPDK-------LKAVDIKTMPHPGFPTDMQSQMMALLLQADG 344
Query: 421 PTAIRD-VASWRVKETERMIAICTELRKLGATVEEGPDYCVITPPEKLKVAAIDTYD 476
+ I + V R E E R++ A ++ ++ P L+ A + D
Sbjct: 345 TSMITETVFENRFMHVE-------EFRRMNADIKIEGRSVIMNGPNSLQGAEVGATD 394
>pdb|1E4C|P Chain P, L-Fuculose 1-Phosphate Aldolase From Escherichia Coli
Mutant S71q
Length = 215
Score = 29.6 bits (65), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 43/88 (48%), Gaps = 5/88 (5%)
Query: 58 TVRTVRASASVGTAEKQSKASEIVLQPIREISGTVTLPGSKSLSNRILLLAALSEGTTVV 117
T T S V A K KA+ +LQ I+ V L + L++ + +LA L T +
Sbjct: 130 TFGTRELSEHVALALKNRKAT--LLQHHGLIACEVNLEKALWLAHEVEVLAQLYLTTLAI 187
Query: 118 DN---LLSSEDIHHMLDALKKLGLNVEE 142
+ +LS E+I +L+ K GL +EE
Sbjct: 188 TDPVPVLSDEEIAVVLEKFKTFGLRIEE 215
>pdb|1DZV|P Chain P, L-Fuculose-1-Phosphate Aldolase From Escherichia Coli
Mutant Y113fY209F
Length = 215
Score = 29.3 bits (64), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 43/88 (48%), Gaps = 5/88 (5%)
Query: 58 TVRTVRASASVGTAEKQSKASEIVLQPIREISGTVTLPGSKSLSNRILLLAALSEGTTVV 117
T T S V A K KA+ +LQ I+ V L + L++ + +LA L T +
Sbjct: 130 TFGTRELSEHVALALKNRKAT--LLQHHGLIACEVNLEKALWLAHEVEVLAQLYLTTLAI 187
Query: 118 DN---LLSSEDIHHMLDALKKLGLNVEE 142
+ +LS E+I +L+ K GL +EE
Sbjct: 188 TDPVPVLSDEEIAVVLEKFKTFGLRIEE 215
>pdb|1E4B|P Chain P, L-Fuculose 1-Phosphate Aldolase From Escherichia Coli
Mutant N29q
Length = 215
Score = 29.3 bits (64), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 43/88 (48%), Gaps = 5/88 (5%)
Query: 58 TVRTVRASASVGTAEKQSKASEIVLQPIREISGTVTLPGSKSLSNRILLLAALSEGTTVV 117
T T S V A K KA+ +LQ I+ V L + L++ + +LA L T +
Sbjct: 130 TFGTRELSEHVALALKNRKAT--LLQHHGLIACEVNLEKALWLAHEVEVLAQLYLTTLAI 187
Query: 118 DN---LLSSEDIHHMLDALKKLGLNVEE 142
+ +LS E+I +L+ K GL +EE
Sbjct: 188 TDPVPVLSDEEIAVVLEKFKTFGLRIEE 215
>pdb|1E48|P Chain P, L-Fuculose 1-Phosphate Aldolase From Escherichia Coli
Mutant E73qY113FY209F
Length = 215
Score = 29.3 bits (64), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 43/88 (48%), Gaps = 5/88 (5%)
Query: 58 TVRTVRASASVGTAEKQSKASEIVLQPIREISGTVTLPGSKSLSNRILLLAALSEGTTVV 117
T T S V A K KA+ +LQ I+ V L + L++ + +LA L T +
Sbjct: 130 TFGTRELSEHVALALKNRKAT--LLQHHGLIACEVNLEKALWLAHEVEVLAQLYLTTLAI 187
Query: 118 DN---LLSSEDIHHMLDALKKLGLNVEE 142
+ +LS E+I +L+ K GL +EE
Sbjct: 188 TDPVPVLSDEEIAVVLEKFKTFGLRIEE 215
>pdb|1E4A|P Chain P, L-Fuculose 1-Phosphate Aldolase From Escherichia Coli
Mutant Del(27)
Length = 214
Score = 29.3 bits (64), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 43/88 (48%), Gaps = 5/88 (5%)
Query: 58 TVRTVRASASVGTAEKQSKASEIVLQPIREISGTVTLPGSKSLSNRILLLAALSEGTTVV 117
T T S V A K KA+ +LQ I+ V L + L++ + +LA L T +
Sbjct: 129 TFGTRELSEHVALALKNRKAT--LLQHHGLIACEVNLEKALWLAHEVEVLAQLYLTTLAI 186
Query: 118 DN---LLSSEDIHHMLDALKKLGLNVEE 142
+ +LS E+I +L+ K GL +EE
Sbjct: 187 TDPVPVLSDEEIAVVLEKFKTFGLRIEE 214
>pdb|1E49|P Chain P, L-Fuculose 1-Phosphate Aldolase From Escherichia Coli
Mutant N29lS71A
Length = 215
Score = 28.9 bits (63), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 43/88 (48%), Gaps = 5/88 (5%)
Query: 58 TVRTVRASASVGTAEKQSKASEIVLQPIREISGTVTLPGSKSLSNRILLLAALSEGTTVV 117
T T S V A K KA+ +LQ I+ V L + L++ + +LA L T +
Sbjct: 130 TFGTRELSEHVALALKNRKAT--LLQHHGLIACEVNLEKALWLAHEVEVLAQLYLTTLAI 187
Query: 118 DN---LLSSEDIHHMLDALKKLGLNVEE 142
+ +LS E+I +L+ K GL +EE
Sbjct: 188 TDPVPVLSDEEIAVVLEKFKTYGLRIEE 215
>pdb|1DZZ|P Chain P, L-Fuculose-1-Phosphate Aldolase From Escherichia Coli
Mutant Y113f
Length = 215
Score = 28.9 bits (63), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 43/88 (48%), Gaps = 5/88 (5%)
Query: 58 TVRTVRASASVGTAEKQSKASEIVLQPIREISGTVTLPGSKSLSNRILLLAALSEGTTVV 117
T T S V A K KA+ +LQ I+ V L + L++ + +LA L T +
Sbjct: 130 TFGTRELSEHVALALKNRKAT--LLQHHGLIACEVNLEKALWLAHEVEVLAQLYLTTLAI 187
Query: 118 DN---LLSSEDIHHMLDALKKLGLNVEE 142
+ +LS E+I +L+ K GL +EE
Sbjct: 188 TDPVPVLSDEEIAVVLEKFKTYGLRIEE 215
>pdb|1DZU|P Chain P, L-Fuculose-1-Phosphate Aldolase From Escherichia Coli
Mutant T26a
Length = 215
Score = 28.9 bits (63), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 43/88 (48%), Gaps = 5/88 (5%)
Query: 58 TVRTVRASASVGTAEKQSKASEIVLQPIREISGTVTLPGSKSLSNRILLLAALSEGTTVV 117
T T S V A K KA+ +LQ I+ V L + L++ + +LA L T +
Sbjct: 130 TFGTRELSEHVALALKNRKAT--LLQHHGLIACEVNLEKALWLAHEVEVLAQLYLTTLAI 187
Query: 118 DN---LLSSEDIHHMLDALKKLGLNVEE 142
+ +LS E+I +L+ K GL +EE
Sbjct: 188 TDPVPVLSDEEIAVVLEKFKTYGLRIEE 215
>pdb|1FUA|A Chain A, L-Fuculose 1-Phosphate Aldolase Crystal Form T
pdb|2FUA|A Chain A, L-Fuculose 1-Phosphate Aldolase Crystal Form T With Cobalt
pdb|3FUA|A Chain A, L-Fuculose-1-Phosphate Aldolase Crystal Form K
pdb|4FUA|A Chain A, L-fuculose-1-phosphate Aldolase Complex With Pgh
Length = 215
Score = 28.9 bits (63), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 43/88 (48%), Gaps = 5/88 (5%)
Query: 58 TVRTVRASASVGTAEKQSKASEIVLQPIREISGTVTLPGSKSLSNRILLLAALSEGTTVV 117
T T S V A K KA+ +LQ I+ V L + L++ + +LA L T +
Sbjct: 130 TFGTRELSEHVALALKNRKAT--LLQHHGLIACEVNLEKALWLAHEVEVLAQLYLTTLAI 187
Query: 118 DN---LLSSEDIHHMLDALKKLGLNVEE 142
+ +LS E+I +L+ K GL +EE
Sbjct: 188 TDPVPVLSDEEIAVVLEKFKTYGLRIEE 215
>pdb|1E47|P Chain P, L-Fuculose 1-Phosphate Aldolase From Escherichia Coli
Mutant E73q
Length = 215
Score = 28.5 bits (62), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 43/88 (48%), Gaps = 5/88 (5%)
Query: 58 TVRTVRASASVGTAEKQSKASEIVLQPIREISGTVTLPGSKSLSNRILLLAALSEGTTVV 117
T T S V A K KA+ +LQ I+ V L + L++ + +LA L T +
Sbjct: 130 TFGTRELSEHVALALKNRKAT--LLQHHGLIACEVNLEKALWLAHEVEVLAQLYLTTLAI 187
Query: 118 DN---LLSSEDIHHMLDALKKLGLNVEE 142
+ +LS E+I +L+ K GL +EE
Sbjct: 188 TDPVPVLSDEEIAVVLEKFKTYGLRIEE 215
>pdb|1E46|P Chain P, L-Fuculose 1-Phosphate Aldolase From Escherichia Coli
Mutant E73s
Length = 215
Score = 28.5 bits (62), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 43/88 (48%), Gaps = 5/88 (5%)
Query: 58 TVRTVRASASVGTAEKQSKASEIVLQPIREISGTVTLPGSKSLSNRILLLAALSEGTTVV 117
T T S V A K KA+ +LQ I+ V L + L++ + +LA L T +
Sbjct: 130 TFGTRELSEHVALALKNRKAT--LLQHHGLIACEVNLEKALWLAHEVEVLAQLYLTTLAI 187
Query: 118 DN---LLSSEDIHHMLDALKKLGLNVEE 142
+ +LS E+I +L+ K GL +EE
Sbjct: 188 TDPVPVLSDEEIAVVLEKFKTYGLRIEE 215
>pdb|1DZW|P Chain P, L-Fuculose-1-Phosphate Aldolase From Escherichia Coli
Mutant F131a
Length = 215
Score = 28.5 bits (62), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 43/88 (48%), Gaps = 5/88 (5%)
Query: 58 TVRTVRASASVGTAEKQSKASEIVLQPIREISGTVTLPGSKSLSNRILLLAALSEGTTVV 117
T T S V A K KA+ +LQ I+ V L + L++ + +LA L T +
Sbjct: 130 TAGTRELSEHVALALKNRKAT--LLQHHGLIACEVNLEKALWLAHEVEVLAQLYLTTLAI 187
Query: 118 DN---LLSSEDIHHMLDALKKLGLNVEE 142
+ +LS E+I +L+ K GL +EE
Sbjct: 188 TDPVPVLSDEEIAVVLEKFKTYGLRIEE 215
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.318 0.134 0.389
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 13,371,592
Number of Sequences: 62578
Number of extensions: 486979
Number of successful extensions: 1497
Number of sequences better than 100.0: 59
Number of HSP's better than 100.0 without gapping: 41
Number of HSP's successfully gapped in prelim test: 18
Number of HSP's that attempted gapping in prelim test: 1305
Number of HSP's gapped (non-prelim): 107
length of query: 519
length of database: 14,973,337
effective HSP length: 103
effective length of query: 416
effective length of database: 8,527,803
effective search space: 3547566048
effective search space used: 3547566048
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 54 (25.4 bits)