Query 010072
Match_columns 519
No_of_seqs 160 out of 965
Neff 8.2
Searched_HMMs 29240
Date Mon Mar 25 19:17:38 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/010072.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/010072hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1dn1_A NSEC1, syntaxin binding 100.0 2.7E-83 9.1E-88 697.1 36.5 447 1-511 131-589 (594)
2 2xhe_A UNC18; exocytosis, exoc 100.0 2.3E-81 7.9E-86 691.4 41.6 476 1-511 127-619 (650)
3 1epu_A S-SEC1; parallel beta-s 100.0 1.6E-81 5.5E-86 687.7 37.5 450 1-509 128-590 (591)
4 3puk_A Syntaxin-binding protei 100.0 5.9E-82 2E-86 686.3 30.0 439 1-511 134-584 (592)
5 3c98_A Syntaxin-binding protei 100.0 4.5E-80 1.5E-84 677.8 37.8 447 1-511 143-601 (606)
6 1mqs_A SLY1 protein, SLY1P; SM 100.0 3E-71 1E-75 612.5 29.6 453 1-513 162-667 (671)
7 3he4_B Synzip5; heterodimeric 42.9 37 0.0013 21.7 4.0 32 211-242 3-34 (46)
8 1tqx_A D-ribulose-5-phosphate 37.8 22 0.00075 32.9 3.5 41 459-503 173-213 (227)
9 1y0e_A Putative N-acetylmannos 27.5 51 0.0018 29.7 4.2 45 459-507 175-220 (223)
10 3cu2_A Ribulose-5-phosphate 3- 27.2 40 0.0014 31.4 3.4 43 459-504 187-229 (237)
11 1h1y_A D-ribulose-5-phosphate 26.7 26 0.00088 32.2 1.9 40 459-502 173-212 (228)
12 3ctl_A D-allulose-6-phosphate 26.2 38 0.0013 31.3 3.0 43 459-505 167-214 (231)
13 2nv1_A Pyridoxal biosynthesis 21.1 54 0.0018 31.5 3.1 43 460-506 210-256 (305)
14 3ovp_A Ribulose-phosphate 3-ep 20.1 40 0.0014 31.1 1.8 38 459-500 169-206 (228)
No 1
>1dn1_A NSEC1, syntaxin binding protein 1; protein-protein complex, multi-subunit; 2.60A {Rattus norvegicus} PDB: 3puj_A 3c98_A
Probab=100.00 E-value=2.7e-83 Score=697.13 Aligned_cols=447 Identities=28% Similarity=0.520 Sum_probs=357.0
Q ss_pred CceeeeeeecCCCeEEeCCCcchhhhcCCCCCchhhhHHHHHHHHHHHHHHHHhCCCceEEEecCCCcccccccccccch
Q 010072 1 MQMNLEYFAIDSQGFVTDDERALEELFGDEENSRRGDACLNVMASRIATVFASLREFPLVRYRAAKSLDTMTMTTFSDLI 80 (519)
Q Consensus 1 ~E~~~df~~ld~~lfsl~~~~~~~~l~~~~~~~~~~~~~l~~ia~~L~sl~~~lg~~P~Ir~~~~~~~~~~~~~~~~~~i 80 (519)
.|+++||+|+|+++|||++|++|..+|.++. ..+....++++|++|++||.++|.+|.|||+|+. ..
T Consensus 131 ~e~~ldfiple~dlFsL~~p~~f~~l~~~~~-~~~~~~~l~~ia~~L~sl~~tlg~~P~IRy~~~~------------~~ 197 (594)
T 1dn1_A 131 TEINIAFLPYESQVYSLDSADSFQSFYSPHK-AQMKNPILERLAEQIATLCATLKEYPAVRYRGEY------------KD 197 (594)
T ss_dssp EECCCCSEEEETTEEECCCTTHHHHHHCGGG-TTSHHHHHHHHHHHHHHHHHHHTCCCEECCCTTS------------HH
T ss_pred heeeeeeEEccCCEEEecCcchHHHHhCCcc-cccchHHHHHHHHHHHHHHHHcCCCCEEEECCCc------------hH
Confidence 3899999999999999999999999999543 2244789999999999999999999999998874 24
Q ss_pred HHHHHHHHHHHHHHhhhhcCCCC---CCCCeeEEEecCCCCccccchhhhhhhHHHhhhcccCCCeEEeeccCCCCCCCc
Q 010072 81 PTKLAAGVWNCLMKYKQSIENFP---QTETCDLLILDRSVDQVAPIIHEWTYDAICRDLLNMEGNKYVHEVPSKTGGPPE 157 (519)
Q Consensus 81 ~~~la~~l~~~l~~~~~~~~~~~---~~~~~~LiIlDR~~DliTPLlh~~TYqall~dl~~I~~~~v~~~~~~~~g~~~~ 157 (519)
|+++|+.+++.|.++...++.++ ..++++|||+||++|++|||+||||||||+||+|||++|+|+++.+. .+..+
T Consensus 198 ~~~lA~~v~~~l~~~~~~~~~~~~~~~~~~~~LiIlDR~~D~vTPLlhq~TYqalv~dll~I~~n~v~~~~~~--~~~~~ 275 (594)
T 1dn1_A 198 NALLAQLIQDKLDAYKADDPTMGEGPDKARSQLLILDRGFDPSSPVLHELTFQAMSYDLLPIENDVYKYETSG--IGEAR 275 (594)
T ss_dssp HHHHHHHHHHHHHHHHTTCTTTTCSTTGGGCEEEEEEGGGCSSTTTSCCCBHHHHHHHHSCCBTTEEEEEECS--SSSCE
T ss_pred HHHHHHHHHHHHHHhhccCccccCCCCCCCCeEEEEcCCccccccccccccHHHHHHHHhcccCCEEEecCCC--CCCcc
Confidence 77899999988888765444432 23478999999999999999999999999999999999999998632 12345
Q ss_pred ceeEeCCCCChHHHHhhcCcHHHHHHHHHHHHHHHHHhhHHHhhhhcccCCCCCCHHHHHHHHHhCcchHHHHHHHHHHH
Q 010072 158 KKEVLLEEHDPLWLELRHAHIADASERLHEKMTSFISKNKAAQIQHSARDGGELSTKDLQKMVQALPQYSDQIDKLSLHV 237 (519)
Q Consensus 158 ~k~~~l~~~D~~~~~~r~~~~~~v~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~lp~~~~~~~~l~~H~ 237 (519)
++++.|+++|+||.++||+||++|++.|.+++++|+++++.. .++..+++||++||++||+|+++++.+++|+
T Consensus 276 ~k~~~L~~~D~~~~~~r~~~f~~v~~~l~~~~~~~~~~~~~~-------~~~~~s~~dl~~~v~~lP~~~~~~~~l~~H~ 348 (594)
T 1dn1_A 276 VKEVLLDEDDDLWIALRHKHIAEVSQEVTRSLKDFSSSKRMN-------TGEKTTMRDLSQMLKKMPQYQKELSKYSTHL 348 (594)
T ss_dssp EEEEECSTTCHHHHHHTTSBHHHHHHHHHHHHHHHHHHTTC--------------CCSSCCTTTTCGGGHHHHHHHHHHH
T ss_pred ceEEecCCCCHHHHHHhccCHHHHHHHHHHHHHHHHHHhhhc-------ccccCCHHHHHHHHHHhHHHHHHHHHHHHHH
Confidence 688999999999999999999999999999999998764321 1245678899999999999999999999999
Q ss_pred HHHHHHHHHHHHHhHHHHHHHHHHhhcCCCc--------hHHHHHhhhcCCCCChhhHHHHHHHHHHHcCCCCCchhHHH
Q 010072 238 EIAGKINKIIRELRLRELGQLEQDLVFGDAG--------LKDVVKFFTTNEDVSRENKLRLLMILAAIYPEKFQGEKGQN 309 (519)
Q Consensus 238 ~i~~~i~~~~~~~~l~~~~~lEq~i~~g~~~--------~~~~~~~i~~~~~~~~~dklRLl~L~~l~~~~g~~~~~~~~ 309 (519)
+||++|++.+++ .|++++++||++++|.+. .+.+.++|. ++.++.+|||||+|||+|++ +|++++++.+
T Consensus 349 ~ia~~l~~~~~~-~l~~~~e~EQ~l~~g~d~~~~~~k~~~~~i~~lL~-~~~~~~~dkLRL~~Ly~l~~-~g~~~~~~~~ 425 (594)
T 1dn1_A 349 HLAEDCMKHYQG-TVDKLCRVEQDLAMGTDAEGEKIKDPMRAIVPILL-DANVSTYDKIRIILLYIFLK-NGITEENLNK 425 (594)
T ss_dssp HHHHHHHHHHHT-THHHHHHHHHHHHHSBCSSCCBCCCTHHHHHHHHH-CTTSCHHHHHHHHHHHHHHT-TCBCHHHHHH
T ss_pred HHHHHHHHHHHH-HHHHHHHHHHHHHcCCCcccchhHHHHHHHHHHHh-CCCCChHhHHHHHHHHHHHc-CCCCHHHHHH
Confidence 999999999987 899999999999998642 234566776 57899999999999999997 6899999999
Q ss_pred HHHHhCCChhHHHHHHHHHHhcCccccCCCCCCCCCcchhhhhhhhcccccCCCCccccccccchHHHHHHHHHHhcCCC
Q 010072 310 IMKLARLQSDDITAVNNMRLLGGASDIKKSSTGAFSLKFDINKKKRAVRKDRTGEEQTWQLSRFYPMIEELIEKLGKREL 389 (519)
Q Consensus 310 llq~~g~~~~~~~~l~~L~~lg~~~~~~~~~~~~~~~~f~~~k~~~~~~~~~~~~~~~y~~s~y~Pl~~~lve~~~~~~l 389 (519)
+++++|++.+++.++.||+++|+...+... ..+.+.+.++.+ +.++.|.+|||+|++++++|++++|+|
T Consensus 426 L~~~~~~~~~~~~~i~nl~~lG~~~~~~~~----------~~k~~~~~~k~~-~~e~~Y~lsr~~P~l~~ile~~~~~~L 494 (594)
T 1dn1_A 426 LIQHAQIPPEDSEIITNMAHLGVPIVTDST----------LRRRSKPERKER-ISEQTYQLSRWTPIIKDIMEDTIEDKL 494 (594)
T ss_dssp HHHHHTCCHHHHHHHHHGGGGTCCCBCCCG----------GGCCCCCCCCCC-CCSCCCTTCCCCCHHHHHHHHHHTTCS
T ss_pred HHHHcCCCHHHHHHHHHHHHhCCccccccc----------cccccccccccC-CCCccceeeccchHHHHHHHHHHhCCC
Confidence 999999999999999999999987542211 011122233333 578999999999999999999999999
Q ss_pred CCCCCCCcCCCCCCccccccccccCCCcccccccCCCCCcccCCCCCCCCCCccchhcccccccccCCceEEEEEEcCCC
Q 010072 390 PKDDYPCMNEPSPTVHAKNQSAAISQPPVAHSMRSRRTPTWARPRNSDDGYSSDSVLRHASSDFKKMGQRIFVFIVGGAT 469 (519)
Q Consensus 390 ~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~viVfvvGGvT 469 (519)
+++.|||+.++++...+ .+..+.|+++|++.+.+.+ ...++++|||||||+|
T Consensus 495 ~~~~fP~~~~~~~~~~~-------------~~~~s~r~~~w~~~~~~~~---------------~~~~~riivFivGG~T 546 (594)
T 1dn1_A 495 DTKHYPYISTRSSASFS-------------TTAVSARYGHWHKNKAPGE---------------YRSGPRLIIFILGGVS 546 (594)
T ss_dssp CTTTSCCSSCC------------------------------------------------------CCCCEEEEEEETCEE
T ss_pred CcccCCccCCCCCcccc-------------ccccccccccccccCCccc---------------cccCCcEEEEEeCCcc
Confidence 99999999765421100 1122345578986543211 1357899999999999
Q ss_pred HHHHHHHHHHHhhc-CCeEEEccccccChhHHHHHHhccCCCC
Q 010072 470 RSELRVCHKLTRKL-NREIILGSTSLDDPPQFITKMKMLTVDE 511 (519)
Q Consensus 470 y~Ei~al~~l~~~~-~~~iiigsT~I~~~~~fl~~l~~l~~~~ 511 (519)
|+|+|++|++++.. |++|+||||+|+||.+||++|+.|+.+.
T Consensus 547 y~E~r~~~els~~~~~~~VilG~t~il~p~~Fl~~l~~l~~~~ 589 (594)
T 1dn1_A 547 LNEMRCAYEVTQANGKWEVLIGSTHILTPQKLLDTLKKLNKTD 589 (594)
T ss_dssp HHHHHHHHHHHHHHSSCEEEEEESSEECHHHHHHHHTTTTSCS
T ss_pred HHHHHHHHHHHhhcCCceEEEeeCCcCCHHHHHHHHHHhCCCc
Confidence 99999999999986 4999999999999999999999998765
No 2
>2xhe_A UNC18; exocytosis, exocytosis complex, snare, neuro fusion, SM PROT choanoflagellates; 2.80A {Monosiga brevicollis}
Probab=100.00 E-value=2.3e-81 Score=691.43 Aligned_cols=476 Identities=23% Similarity=0.434 Sum_probs=355.7
Q ss_pred CceeeeeeecCCCeEEeCCCcchhhhcCCCCCchhhhHHHHHHHHHHHHHHHHhCCCceEEEecCCCcccccccccccch
Q 010072 1 MQMNLEYFAIDSQGFVTDDERALEELFGDEENSRRGDACLNVMASRIATVFASLREFPLVRYRAAKSLDTMTMTTFSDLI 80 (519)
Q Consensus 1 ~E~~~df~~ld~~lfsl~~~~~~~~l~~~~~~~~~~~~~l~~ia~~L~sl~~~lg~~P~Ir~~~~~~~~~~~~~~~~~~i 80 (519)
.|+++||+|+|+|+|||++|++|..+|.+. +....++++|++|++||.++|.+|.|||+|+++ ..
T Consensus 127 ~e~~ldfiple~dlfsL~~~~~~~~l~~~~----~~~~~l~~ia~~L~sl~~~lg~~P~Ir~~~~~~-----------~~ 191 (650)
T 2xhe_A 127 KEINTLFIPKEHRVFTLNEPHGLVQYYGSR----SSSYNIDHLVRRLSTLCTTMNVAPIVRYSSTST-----------PG 191 (650)
T ss_dssp EECCCCSEEEETTEEECSCTTHHHHHHSTT----GGGCCHHHHHHHHHHHHHHHTCCCEEEECTTCC-----------HH
T ss_pred EEEccceEeccCCEEEeCCchHHHHhcCCc----cchHHHHHHHHHHHHHHHHcCCCCEEEecCCCc-----------hH
Confidence 489999999999999999999999999632 225689999999999999999999999988741 25
Q ss_pred HHHHHHHHHHHHHHhhhhcCCC---CCCCCeeEEEecCCCCccccchhhhhhhHHHhhhcccCCCeEEeeccCCCCCCCc
Q 010072 81 PTKLAAGVWNCLMKYKQSIENF---PQTETCDLLILDRSVDQVAPIIHEWTYDAICRDLLNMEGNKYVHEVPSKTGGPPE 157 (519)
Q Consensus 81 ~~~la~~l~~~l~~~~~~~~~~---~~~~~~~LiIlDR~~DliTPLlh~~TYqall~dl~~I~~~~v~~~~~~~~g~~~~ 157 (519)
|+++|+.+++.+.. ..+...+ +...+++|||+||++|++|||+||||||||+||+|||++|+|+++.+.. ++..+
T Consensus 192 a~~la~~l~~~l~~-~~~~~~~~~~~~~~~~~LiIlDR~~D~vTPLlhq~TYqaLi~dll~I~~n~v~~~~~~~-~~~~~ 269 (650)
T 2xhe_A 192 TERMAMQLQKEIDM-SVSQGLINAREGKLKSQFLILDRAVDLKSPLVHELTYQAAAYDLLNIENDIYSYSTVDA-GGREQ 269 (650)
T ss_dssp HHHHHHHHHHHHHH-HHTTTSCCCCCCSSCCEEEEECGGGCSSTTTSCCCBHHHHHHHHSCCBTTEEEEEECCS-SCCSE
T ss_pred HHHHHHHHHHHHHh-hccCCcccCCCCCCCCEEEEEcCCcchhhhccccchHHHHHHHHhcCcCCEEEEEecCC-CCCcc
Confidence 77888888877765 2222221 3345899999999999999999999999999999999999999986422 23455
Q ss_pred ceeEeCCCCChHHHHhhcCcHHHHHHHHHHHHHHHHHhhHHHhhhh-cccCCCCCCHHHHHHHHHhCcchHHHHHHHHHH
Q 010072 158 KKEVLLEEHDPLWLELRHAHIADASERLHEKMTSFISKNKAAQIQH-SARDGGELSTKDLQKMVQALPQYSDQIDKLSLH 236 (519)
Q Consensus 158 ~k~~~l~~~D~~~~~~r~~~~~~v~~~l~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~v~~lp~~~~~~~~l~~H 236 (519)
++++.|+++|+||.++||+||++|++.|.+++++|+++++. .+. ....++..+++||++||++||+|+++++.+++|
T Consensus 270 ~k~~~L~~~D~~~~~~r~~~f~~v~~~l~~~~~~~~~~~~~--~~~~~~~~~~~~s~~~lk~~V~~LP~~~~~~~~l~~H 347 (650)
T 2xhe_A 270 QRQVVLGEDDDIWLQMRHLHISEVFRKVKSSFDEFCVSARR--LQGLRDSQQGEGGAGALKQMLKDLPQHREQMQKYSLH 347 (650)
T ss_dssp EEEEECCTTCTTHHHHTTSBHHHHHHHHHHHHHHHHHHHHH--TTTCCCCCCSTTTHHHHHHHHHHCGGGHHHHHHHHHH
T ss_pred ceEEeCCCCCHHHHHHhccCHHHHHHHHHHHHHHHHHHhhh--hccccccccccccHHHHHHHHHHhHHHHHHHHHHHHH
Confidence 78899999999999999999999999999999999887643 221 000124578999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhHHHHHHHHHHhhcCCCc--------hHHHHHhhhcCCCCChhhHHHHHHHHHHHcCCCCCchhHH
Q 010072 237 VEIAGKINKIIRELRLRELGQLEQDLVFGDAG--------LKDVVKFFTTNEDVSRENKLRLLMILAAIYPEKFQGEKGQ 308 (519)
Q Consensus 237 ~~i~~~i~~~~~~~~l~~~~~lEq~i~~g~~~--------~~~~~~~i~~~~~~~~~dklRLl~L~~l~~~~g~~~~~~~ 308 (519)
++||++|++.+++ +|++++++||++++|.+. .+.+.++|. +...+.+|||||+|||++++ +|+++++++
T Consensus 348 ~~ia~~l~~~i~~-~l~~~~~~EQ~l~~g~d~~g~~~~~~~~~i~~ll~-~~~~~~~dkLRLl~Ly~l~~-~g~~~~~l~ 424 (650)
T 2xhe_A 348 LDMSNAINMAFSS-TIDSCTKAEQNIVTEEEQDGNKVRDFIGEVASVVV-DRRVSTEDKLRCLMLCVLAK-NGTSSHELN 424 (650)
T ss_dssp HHHHHHHHHHSCH-HHHHHHHHHHHHHHSBCSSCCBCCCHHHHHHHHHH-CTTSCHHHHHHHHHHHHHHH-TCBCHHHHH
T ss_pred HHHHHHHHHHHHH-HHHHHHHHHHHHhcCCcccccchhHHHHHHHHHHh-CCCCCHHHHHHHHHHHHHHh-CCCCHHHHH
Confidence 9999999999999 999999999999998742 245677776 56889999999999999999 589999999
Q ss_pred HHHHHhCCChhHHHHHHHHHHhcCccccCCCCCCCCCcchhhhhhhhcccccCCCCccccccccchHHHHHHHHHHhcCC
Q 010072 309 NIMKLARLQSDDITAVNNMRLLGGASDIKKSSTGAFSLKFDINKKKRAVRKDRTGEEQTWQLSRFYPMIEELIEKLGKRE 388 (519)
Q Consensus 309 ~llq~~g~~~~~~~~l~~L~~lg~~~~~~~~~~~~~~~~f~~~k~~~~~~~~~~~~~~~y~~s~y~Pl~~~lve~~~~~~ 388 (519)
++++.||++.+++.+|.||+++|+...+.. +.. +.+....++ ...+|+|+||+|+++++||.+++++
T Consensus 425 ~ll~~~G~~~~~~~~i~nL~~lgl~~~~~~---~~~-------~~~~~~rk~---~~~~yv~s~y~Pl~~rlve~l~~~~ 491 (650)
T 2xhe_A 425 NLLDNANIATPSRSAIYNLEMLGATVVADR---RGR-------KPKTMKRIE---RDMPYVLSRWTPIVKDLMEYIATGQ 491 (650)
T ss_dssp HHHHHTTCCGGGGHHHHGGGGGTCCCBGGG---CCC-------CCCCCCCCC---CCCCSTTCCCCCHHHHHHHHHTTTC
T ss_pred HHHHHcCCCHHHHHHHHHHHHhCCcccccc---ccc-------ccccccccc---cCCcceeccchHHHHHHHHHHhcCC
Confidence 999999999999999999999999865321 100 011111112 2238999999999999999999999
Q ss_pred CCCCCCCCcCCCCCCccccccccccCCCcccccccCCCCCcccCCCCCCCC----CCccchhcccc-cccccCCceEEEE
Q 010072 389 LPKDDYPCMNEPSPTVHAKNQSAAISQPPVAHSMRSRRTPTWARPRNSDDG----YSSDSVLRHAS-SDFKKMGQRIFVF 463 (519)
Q Consensus 389 l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~----~~~~s~~~~~~-~~~~~~~~~viVf 463 (519)
|+++.||++.++.....+.+...+.....+....++.+.++|++...+... .++++..+... .+....+++||||
T Consensus 492 l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~w~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~viVF 571 (650)
T 2xhe_A 492 LDLESYPAVRDGPSVVQPKRASKSVEEDDDGPATSARKRGNWAKNKGNNRSLPSTPSGVAVSGNGAAGAAESAKPKLFVF 571 (650)
T ss_dssp SCTTTSCBSSCGGGSCCCC---------------------------------------------------CCCSCEEEEE
T ss_pred CCcccCceeCCCCccccccccccccccccccccccccccccccccccccccccccccccccccccccccccCCCCEEEEE
Confidence 999999998754321111000000000000011123345688865432111 00011111000 0011356889999
Q ss_pred EEcCCCHHHHHHHHHHHhhcCCeEEEccccccChhHHHHHHhccCCCC
Q 010072 464 IVGGATRSELRVCHKLTRKLNREIILGSTSLDDPPQFITKMKMLTVDE 511 (519)
Q Consensus 464 vvGGvTy~Ei~al~~l~~~~~~~iiigsT~I~~~~~fl~~l~~l~~~~ 511 (519)
|||||||+|+|++|+|+++.+++||||||+|+||++||++|..|+.++
T Consensus 572 ~iGGvTysEi~al~~ls~~~~~~viigsT~Iln~~~fl~~l~~l~~~~ 619 (650)
T 2xhe_A 572 INGTVSYNEIRCAYEVSQSSGYEVYIGAHNIATPAEFVELVSLLDKAD 619 (650)
T ss_dssp EEEEECHHHHHHHHHHHTTSSSEEEEEEEEECCHHHHHHHHHTTTC--
T ss_pred EECCCCHHHHHHHHHHHhcCCCEEEEeeCCcCCHHHHHHHHHHcCCCc
Confidence 999999999999999999999999999999999999999999998765
No 3
>1epu_A S-SEC1; parallel beta-sheets, LEFT-hand turn connection, helical BUN endocytosis-exocytosis complex; 2.40A {Loligo pealei} SCOP: e.25.1.1 PDB: 1fvf_A 1fvh_A
Probab=100.00 E-value=1.6e-81 Score=687.75 Aligned_cols=450 Identities=27% Similarity=0.475 Sum_probs=351.0
Q ss_pred CceeeeeeecCCCeEEeCCCcchhhhcCCCCCchhhhHHHHHHHHHHHHHHHHhCCCceEEEecCCCcccccccccccch
Q 010072 1 MQMNLEYFAIDSQGFVTDDERALEELFGDEENSRRGDACLNVMASRIATVFASLREFPLVRYRAAKSLDTMTMTTFSDLI 80 (519)
Q Consensus 1 ~E~~~df~~ld~~lfsl~~~~~~~~l~~~~~~~~~~~~~l~~ia~~L~sl~~~lg~~P~Ir~~~~~~~~~~~~~~~~~~i 80 (519)
.|+++||+|+|+|+|||++|++|..+|.+.. ..+....++++|++|++||.++|.+|.|||+|++. .
T Consensus 128 ~e~~ldf~ple~dlfsl~~~~~~~~~~~~~~-~~~~~~~l~~ia~~L~sl~~~lg~~P~Ir~~~~~~------------~ 194 (591)
T 1epu_A 128 KEINIAFLPYESQIFSLDSPDTFQVYYNPSR-AQGGIPNKERCAEQIATLCATLGEYPSVRYRSDFD------------E 194 (591)
T ss_dssp EECCCCSEEEETTEEECCCTHHHHHHHCGGG-STTCHHHHHHHHHHHHHHHHHHTCCCEEEECTTST------------H
T ss_pred eEeccceEecCCCEEEeCCccHHHHhcCCcc-hhhhhHHHHHHHHHHHHHHHHcCCCCeEEecCCCc------------H
Confidence 3899999999999999999999999998532 12346899999999999999999999999988742 4
Q ss_pred HHHHHHHHHHHHHHhhhhcCCCCC---CCCeeEEEecCCCCccccchhhhhhhHHHhhhcccCCCeEEeeccCCCCCCCc
Q 010072 81 PTKLAAGVWNCLMKYKQSIENFPQ---TETCDLLILDRSVDQVAPIIHEWTYDAICRDLLNMEGNKYVHEVPSKTGGPPE 157 (519)
Q Consensus 81 ~~~la~~l~~~l~~~~~~~~~~~~---~~~~~LiIlDR~~DliTPLlh~~TYqall~dl~~I~~~~v~~~~~~~~g~~~~ 157 (519)
|+++|+.++++|.++.++.+.|+. .++++|||+||++|++|||+||||||||+||+|||++|+|+++.+ .++..+
T Consensus 195 a~~lA~~l~~~l~~~~~~~~~~~~~~~~~~~~LiIlDR~~D~vTPLlhq~TYqali~dll~I~~n~v~~~~~--~~~~~~ 272 (591)
T 1epu_A 195 NASFAQLVQQKLDAYRADDPTMGEGPQKDRSQLLILDRGFDPISPLLHELTFQAMAYDLLPIENDVYKYVNT--GGNEVP 272 (591)
T ss_dssp HHHHHHHHHHHHHHHHHTCTTTTCHHHHTSCEEEEEEGGGCSSGGGSCCCBHHHHHHHHSCCBTTEECC-----------
T ss_pred HHHHHHHHHHHHHHHHhcCCCCCCCCCCCCceEEEECCCccchhhhhhhhhHHHHHHHHhCcCCCEEEEEec--CCCCcc
Confidence 788999998888877655555532 458999999999999999999999999999999999999999753 122345
Q ss_pred ceeEeCCCCChHHHHhhcCcHHHHHHHHHHHHHHHHHhhHHHhhhhcccCCCCCCHHHHHHHHHhCcchHHHHHHHHHHH
Q 010072 158 KKEVLLEEHDPLWLELRHAHIADASERLHEKMTSFISKNKAAQIQHSARDGGELSTKDLQKMVQALPQYSDQIDKLSLHV 237 (519)
Q Consensus 158 ~k~~~l~~~D~~~~~~r~~~~~~v~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~lp~~~~~~~~l~~H~ 237 (519)
++++.|+++|+||.++||+||++|++.|++++++|+++++..+ .++..+++||++||++||+|+++++.+++|+
T Consensus 273 ~k~~~L~~~D~~~~~~r~~~f~~v~~~l~~~~~~~~~~~~~~~------~~~~~s~~~lk~~v~~lP~~~~~~~~l~~H~ 346 (591)
T 1epu_A 273 EKEVLLDEKDDLWVEMRHQHIAVVSQNVTKKLKQFADEKRMGT------AADKAGIKDLSQMLKKMPQYQKELSKYSTHL 346 (591)
T ss_dssp --CEECCGGGSSHHHHTTSBHHHHHHHHHHHHHHHHHHTC--------------CCCCCHHHHHTHHHHHHHHTTSHHHH
T ss_pred ceEEeCCCCChHHHHHhccCHHHHHHHHHHHHHHHHHhccccc------cccccCHHHHHHHHHHhHHHHHHHHHHHHHH
Confidence 6889999999999999999999999999999999987653211 0134688999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhHHHHHHHHHHhhcCCCc--------hHHHHHhhhcCCCCChhhHHHHHHHHHHHcCCCCCchhHHH
Q 010072 238 EIAGKINKIIRELRLRELGQLEQDLVFGDAG--------LKDVVKFFTTNEDVSRENKLRLLMILAAIYPEKFQGEKGQN 309 (519)
Q Consensus 238 ~i~~~i~~~~~~~~l~~~~~lEq~i~~g~~~--------~~~~~~~i~~~~~~~~~dklRLl~L~~l~~~~g~~~~~~~~ 309 (519)
+||++|++.+++ +|++++++||++++|.+. .+.++++|. ++..+.+|||||+|||++++ +|++++++.+
T Consensus 347 ~ia~~l~~~i~~-~l~~~~~~EQ~l~~g~d~~g~~~k~~~~~i~~~l~-~~~~~~~dkLRLl~Ly~l~~-~g~~~~~l~~ 423 (591)
T 1epu_A 347 HLAEDCMKQYQQ-HVDKLCKVEQDLAMGTDADGEKIRDHMRNIVPILL-DQKISAYDKIRIILLYIIHK-GGISEENLAK 423 (591)
T ss_dssp HHHHHHHHHHHH-HHHHHHHHHHHHHHSBCTTSCBCCCCHHHHHHHHT-CTTSCHHHHHHHHHHHHHHH-TCBCHHHHHH
T ss_pred HHHHHHHHHHHH-HHHHHHHHHHHHhcCCCccccccchHHHHHHHHHh-CCCCCHHHHHHHHHHHHHHc-CCCCHHHHHH
Confidence 999999999999 999999999999998752 235777776 56789999999999999999 5899999999
Q ss_pred HHHHhCCChhHHHHHHHHHHhcCccccCCCCCCCCCcchhhhhhhhcccccCCCCccccccccchHHHHHHHHHHhcCCC
Q 010072 310 IMKLARLQSDDITAVNNMRLLGGASDIKKSSTGAFSLKFDINKKKRAVRKDRTGEEQTWQLSRFYPMIEELIEKLGKREL 389 (519)
Q Consensus 310 llq~~g~~~~~~~~l~~L~~lg~~~~~~~~~~~~~~~~f~~~k~~~~~~~~~~~~~~~y~~s~y~Pl~~~lve~~~~~~l 389 (519)
+++.||++.+++.++.||+++|+...+...+...+.. ...+. .+. .+++..|+|+||+|+++++||.++++++
T Consensus 424 ll~~~g~~~~~~~~i~~l~~~g~~~~~~~~~~~~~~~--~~~~~----~~~-~~~~~~y~~s~~~Pl~~~ive~l~~~~l 496 (591)
T 1epu_A 424 LVQHAHIPAEEKWIINDMQNLGVPIIQDGGRRKIPQP--YHTHN----RKE-RQADHTYQMSRWTPYMKDIMEAAVEDKL 496 (591)
T ss_dssp HHHHTTCCHHHHHHHHHGGGGTCCCBSCTTSCCCCCT--TSGGG----SCC-CCSCCSCGGGCCCCHHHHHHHHHHTTCS
T ss_pred HHHhcCCCHHHHHHHHHHHHcCCccccCCcccccccc--ccccc----ccc-CCCCccccccccchhHHHHHHHHhcCCC
Confidence 9999999989999999999999876533111011111 00000 111 3567889999999999999999999999
Q ss_pred CCCCCCCcCCCCCCccccccccccCCCcccccccCCCCCcccCCCCCCCCCCccchhcccccccccCCceEEEEEEcCCC
Q 010072 390 PKDDYPCMNEPSPTVHAKNQSAAISQPPVAHSMRSRRTPTWARPRNSDDGYSSDSVLRHASSDFKKMGQRIFVFIVGGAT 469 (519)
Q Consensus 390 ~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~viVfvvGGvT 469 (519)
+++.||+++++.+.... ...++.+++.|++..++.. ...++++|||||||||
T Consensus 497 ~~~~~~~~~~~~~~~~~-------------~~~~s~~~~~~~~~~~~~~---------------~~~~~~viVF~vGG~T 548 (591)
T 1epu_A 497 DTRHYPFLNGGGPRPSC-------------QQPVSVRYGHWHKDKGQAS---------------YKSGPRLIIFVVGGIS 548 (591)
T ss_dssp CTTTSCBTTSCC-----------------------------------------------------CCCCEEEEEEETCBC
T ss_pred CcccCcccCCCCCcccc-------------CCccccccCcccCCCCccc---------------cCCCCeEEEEEECCCC
Confidence 99999999764321100 0112233467875432110 1235679999999999
Q ss_pred HHHHHHHHHHHh--hcCCeEEEccccccChhHHHHHHhccCC
Q 010072 470 RSELRVCHKLTR--KLNREIILGSTSLDDPPQFITKMKMLTV 509 (519)
Q Consensus 470 y~Ei~al~~l~~--~~~~~iiigsT~I~~~~~fl~~l~~l~~ 509 (519)
|+|++++|+|++ ..|++|+||||+|+||++||++|..|++
T Consensus 549 y~E~~~l~~l~~~~~~~~~viigsT~i~n~~~fl~~l~~l~~ 590 (591)
T 1epu_A 549 YSEMRSAYEVTQTAKNNWEVILGSTHILTPEGLLRDLRKISN 590 (591)
T ss_dssp HHHHHHHHHHHTSSCSSCEEEEEESSBCCHHHHHHHHHTTSC
T ss_pred HHHHHHHHHHHhhccCCCeEEEecCCcCCHHHHHHHHHHhcC
Confidence 999999999998 5689999999999999999999999875
No 4
>3puk_A Syntaxin-binding protein 3; membrane trafficking, SM protein, snare proteins, binding protein, endocytosis-exocytosis complex; 3.05A {Mus musculus} PDB: 2pjx_A
Probab=100.00 E-value=5.9e-82 Score=686.29 Aligned_cols=439 Identities=27% Similarity=0.438 Sum_probs=350.7
Q ss_pred CceeeeeeecCCCeEEeCCCcchhhhcCCCCC-chhhhHHHHHHHHHHHHHHHHhCCCceEEEecCCCcccccccccccc
Q 010072 1 MQMNLEYFAIDSQGFVTDDERALEELFGDEEN-SRRGDACLNVMASRIATVFASLREFPLVRYRAAKSLDTMTMTTFSDL 79 (519)
Q Consensus 1 ~E~~~df~~ld~~lfsl~~~~~~~~l~~~~~~-~~~~~~~l~~ia~~L~sl~~~lg~~P~Ir~~~~~~~~~~~~~~~~~~ 79 (519)
.|+++||+|+|+++|||++|++|..+|.++.+ ..+....++++|++|++||.++|.+|.|||+|++..
T Consensus 134 ~e~~ldfiple~~lFsL~~p~~~~~l~~~~~~~~~~~~~~l~~ia~~L~sl~~tlg~~P~IRy~~~~~~----------- 202 (592)
T 3puk_A 134 KEINISFIPQESQVYTLDVPDAFYYCYSPDPSNASRKEVVMEAMAEQIVTVCATLDENPGVRYKSKPLD----------- 202 (592)
T ss_dssp EECCCCEEEEETTEEEECCTTHHHHHSCCSSSTTHHHHHHHHHHHHHHHHHHHHHTCCCEEEECCSSSS-----------
T ss_pred EEEeeeeEeccCCEEEecCCchHHHHcCCcccccccchHHHHHHHHHHHHHHHhcCCCCeEEECCCchH-----------
Confidence 38999999999999999999999999996432 245578999999999999999999999999987421
Q ss_pred hHHHHHHHHHHHHHH-hhhhcCCCCC-CCCeeEEEecCCCCccccchhhhhhhHHHhhhcccCCCeEEeeccCCCCCCCc
Q 010072 80 IPTKLAAGVWNCLMK-YKQSIENFPQ-TETCDLLILDRSVDQVAPIIHEWTYDAICRDLLNMEGNKYVHEVPSKTGGPPE 157 (519)
Q Consensus 80 i~~~la~~l~~~l~~-~~~~~~~~~~-~~~~~LiIlDR~~DliTPLlh~~TYqall~dl~~I~~~~v~~~~~~~~g~~~~ 157 (519)
-|+++|+.+++.|.+ +....+.++. .++++|||+||++|++|||+||||||||+||+|||++|+|+++. .| +
T Consensus 203 ~a~~lA~~l~~~l~~~~~~~~~~~~~~~~~~~LiIlDR~~D~vtPLlh~~TYqalv~dll~i~~~~v~~~~---~g---~ 276 (592)
T 3puk_A 203 NASKLAQLVEKKLEDYYKIDEKGLIKGKTQSQLLIIDRGFDPVSTVLHELTFQAMAYDLLPIENDTYKYKT---DG---K 276 (592)
T ss_dssp HHHHHHHHHHHHHHHSSSSCSSCSCCSCCSEEEEEEEGGGCSSTTTSCCCBHHHHHHHHSCCGGGEEECCS---SS---S
T ss_pred HHHHHHHHHHHHHHHHHhccCCCcCCCCCCceEEEecCCccccccccccccHHHHHHHHhcccCCEEEecC---CC---c
Confidence 256889998888876 3332333322 46899999999999999999999999999999999999999874 12 4
Q ss_pred ceeEeCCCCChHHHHhhcCcHHHHHHHHHHHHHHHHHhhHHHhhhhcccCCCCCCHHHHHHHHHhCcchHHHHHHHHHHH
Q 010072 158 KKEVLLEEHDPLWLELRHAHIADASERLHEKMTSFISKNKAAQIQHSARDGGELSTKDLQKMVQALPQYSDQIDKLSLHV 237 (519)
Q Consensus 158 ~k~~~l~~~D~~~~~~r~~~~~~v~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~lp~~~~~~~~l~~H~ 237 (519)
++++.|+++|+||.++||+||++|++.|.+++++|+++++. ..+..+++||++||++||+|+++++.+++|+
T Consensus 277 ~k~~~L~~~D~~~~~~r~~~f~~v~~~l~~~~~~~~~~~~~--------~~~~~s~~dl~~~v~~lp~~~~~~~~l~~H~ 348 (592)
T 3puk_A 277 EKEAVLEEDDDLWVRVRHRHIAVVLEEIPKLMKEISSTKKA--------TEGKTSLSALTQLMKKMPHFRKQISKQVVHL 348 (592)
T ss_dssp CCEEECSTTSSSTTTTTTSBHHHHHTTSCSCSTTTTTCC---------------CCTTHHHHHHHHHHTTTHHHHHHHHH
T ss_pred eeEEecCCCCHHHHHHhccCHHHHHHHHHHHHHHHHHHhhc--------ccCCCCHHHHHHHHHHhHHHHHHHHHHHHHH
Confidence 67899999999999999999999999999999988765431 1235688999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhHHHHHHHHHHhhcCCCc----h----HHHHHhhhcCCCCChhhHHHHHHHHHHHcCCCCCchhHHH
Q 010072 238 EIAGKINKIIRELRLRELGQLEQDLVFGDAG----L----KDVVKFFTTNEDVSRENKLRLLMILAAIYPEKFQGEKGQN 309 (519)
Q Consensus 238 ~i~~~i~~~~~~~~l~~~~~lEq~i~~g~~~----~----~~~~~~i~~~~~~~~~dklRLl~L~~l~~~~g~~~~~~~~ 309 (519)
+||++|++.+++ +|++++++||++++|.+. . +.++++|. ++.++.+|||||+|||+|++ +|++++++.+
T Consensus 349 ~ia~~l~~~~~~-~l~~~~e~EQ~l~~g~d~~~~~~k~~~~~i~~~L~-~~~~~~~dkLRL~lLy~L~~-~g~~~~~~~~ 425 (592)
T 3puk_A 349 NLAEDCMNKFKL-NIEKLCKTEQDLALGTDAEGQRVKDSMLVLLPVLL-NKNHDNCDKIRAVLLYIFGI-NGTTEENLDR 425 (592)
T ss_dssp HHHHHHHHHHHH-THHHHHHHHHHHHSSSCTTCCSCSCCHHHHTTTTT-SCSCCHHHHHHHHHHHHHHS-CBCCHHHHHH
T ss_pred HHHHHHHHHHHH-HHHHHHHHHHHHHhCCCccchhhHHHHHHHHHHHh-CCCCCHHHHHHHHHHHHHHc-CCCCHHHHHH
Confidence 999999999987 899999999999998642 1 23455665 57899999999999999998 6999999999
Q ss_pred HHHHhCCChhHHHHHHHHHHhcCccccCCCCCCCCCcchhhhhhhhcccccCCCCccccccccchHHHHHHHHHHhcCCC
Q 010072 310 IMKLARLQSDDITAVNNMRLLGGASDIKKSSTGAFSLKFDINKKKRAVRKDRTGEEQTWQLSRFYPMIEELIEKLGKREL 389 (519)
Q Consensus 310 llq~~g~~~~~~~~l~~L~~lg~~~~~~~~~~~~~~~~f~~~k~~~~~~~~~~~~~~~y~~s~y~Pl~~~lve~~~~~~l 389 (519)
+++++|++. +..++.||..+|+...+.. . ..+..++. .+.++.|.+|||+|++++++|++++|+|
T Consensus 426 Ll~~~g~~~-~~~~i~nl~~lg~~~~~~~-----~--------~~~~~rk~-~~~e~~Y~~Sr~~P~l~~ile~~~~g~L 490 (592)
T 3puk_A 426 LIHNVKIED-DSDMIRNWSHLGVPIVPPS-----Q--------QAKPLRKD-RSAEETFQLSRWTPFIKDIMEDAIDNRL 490 (592)
T ss_dssp HHHHTCCCT-TTHHHHGGGGGTCCSSSSB-----S--------SCCCCCCC-CCCCCGGGSCCCCCTTHHHHHHHHTCCC
T ss_pred HHHHcCCCh-HHHHHHHHHHhCCccccCc-----c--------ccCccccc-CCCCcceeeeccchHHHHHHHHHHhCCC
Confidence 999999986 8999999999998754221 0 11112233 2578999999999999999999999999
Q ss_pred CCCCCCCcCCCCCCccccccccccCCCcccccccCCCCCcccCCCCCCCCCCccchhcccccccccCCceEEEEEEcCCC
Q 010072 390 PKDDYPCMNEPSPTVHAKNQSAAISQPPVAHSMRSRRTPTWARPRNSDDGYSSDSVLRHASSDFKKMGQRIFVFIVGGAT 469 (519)
Q Consensus 390 ~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~viVfvvGGvT 469 (519)
+++.|||+.+++....+ .+..+.|+++| +.+.+.. ...+++||||||||+|
T Consensus 491 ~~~~fP~~~~~~~~~~~-------------~~~~s~r~~~w-~~~~~~~---------------~~~~~riiVFivGGvT 541 (592)
T 3puk_A 491 DSKEWPYCSRCPAVWNG-------------SGAVSARQKPR-TNYLELD---------------RKNGSRLIIFVIGGIT 541 (592)
T ss_dssp CTTTSCC---------------------------------C-CCCCCCC---------------CSCCSEEEEEEETCEE
T ss_pred CcccCCccCCCCCCccC-------------Ccccccccccc-ccCcccc---------------ccCCCeEEEEEeCCcC
Confidence 99999999865421100 00113445688 4332110 1357899999999999
Q ss_pred HHHHHHHHHHHhhcC-CeEEEccccccChhHHHHHHhccCCCC
Q 010072 470 RSELRVCHKLTRKLN-REIILGSTSLDDPPQFITKMKMLTVDE 511 (519)
Q Consensus 470 y~Ei~al~~l~~~~~-~~iiigsT~I~~~~~fl~~l~~l~~~~ 511 (519)
|+|+|++|++++..+ ++|+||||+|+||.+||++|+.|+++.
T Consensus 542 ysE~r~~~els~~~~~~~vilG~T~i~np~~fl~~l~~l~~~~ 584 (592)
T 3puk_A 542 YSEMRCAYEVSQAHKSCEVIIGSTHILTPRKLLDDIKMLNKSK 584 (592)
T ss_dssp HHHHHHHHHHHHHCCSSEEEEEESSEECHHHHHHHHSSTTSCC
T ss_pred HHHHHHHHHHHhhcCCceEEEeeCCcCCHHHHHHHHHHhCCcc
Confidence 999999999999875 899999999999999999999997643
No 5
>3c98_A Syntaxin-binding protein 1; protein complex, alternative splicing, cytoplasm, membrane, phosphoprotein, protein transport, transport, coiled coil; 2.60A {Rattus norvegicus} PDB: 3puj_A
Probab=100.00 E-value=4.5e-80 Score=677.84 Aligned_cols=447 Identities=28% Similarity=0.518 Sum_probs=355.2
Q ss_pred CceeeeeeecCCCeEEeCCCcchhhhcCCCCCchhhhHHHHHHHHHHHHHHHHhCCCceEEEecCCCcccccccccccch
Q 010072 1 MQMNLEYFAIDSQGFVTDDERALEELFGDEENSRRGDACLNVMASRIATVFASLREFPLVRYRAAKSLDTMTMTTFSDLI 80 (519)
Q Consensus 1 ~E~~~df~~ld~~lfsl~~~~~~~~l~~~~~~~~~~~~~l~~ia~~L~sl~~~lg~~P~Ir~~~~~~~~~~~~~~~~~~i 80 (519)
.|+++||+|+|+|+|||++|++|..+|.++. ..+....++++|++|+++|.++|.+|.|||+|++. .
T Consensus 143 ~e~~ldf~~le~~lfsL~~~~~~~~l~~~~~-~~~~~~~l~~ia~~L~sv~~~lg~~P~Ir~~~~~~------------~ 209 (606)
T 3c98_A 143 TEINIAFLPYESQVYSLDSADSFQSFYSPHK-AQMKNPILERLAEQIATLCATLKEYPAVRYRGEYK------------D 209 (606)
T ss_dssp EECCCCSEECSSSEEECCCTTHHHHHHCGGG-TTSCHHHHHHHHHHHHHHHHHHTCCCEEEECTTSH------------H
T ss_pred EEEecchhhcCCcEEEecCCchHHHhcCCcc-cccchHHHHHHHHHHHHHHHHcCCCCeEEEecCch------------H
Confidence 3899999999999999999999999998543 23346789999999999999999999999988742 4
Q ss_pred HHHHHHHHHHHHHHhhhhcCCC---CCCCCeeEEEecCCCCccccchhhhhhhHHHhhhcccCCCeEEeeccCCCCCCCc
Q 010072 81 PTKLAAGVWNCLMKYKQSIENF---PQTETCDLLILDRSVDQVAPIIHEWTYDAICRDLLNMEGNKYVHEVPSKTGGPPE 157 (519)
Q Consensus 81 ~~~la~~l~~~l~~~~~~~~~~---~~~~~~~LiIlDR~~DliTPLlh~~TYqall~dl~~I~~~~v~~~~~~~~g~~~~ 157 (519)
|+.+|+.+++.++.+.++++.+ +..++++|||+||++|++|||+||||||||+||+|||++|+|+++.+. .+..+
T Consensus 210 ~~~la~~~~~~l~~~~~~~~~~~~~~~~~~~~LlIlDR~~D~vTPLlhq~TYqalv~dll~I~~n~v~~~~~~--~~~~~ 287 (606)
T 3c98_A 210 NALLAQLIQDKLDAYKADDPTMGEGPDKARSQLLILDRGFDPSSPVLHELTFQAMSYDLLPIENDVYKYETSG--IGEAR 287 (606)
T ss_dssp HHHHHHHHHHHHHHHHHHCTTTTCSTTTTSCEEEEEEGGGCSSTTTSCCCBHHHHHHHHSCCBTTEEEEEEES--SSSEE
T ss_pred HHHHHHHHHHHHHHHHhcCCcccCCCCCCCceEEEeeccccccchhcccccHHHHHHHHhCccCCeEEEecCC--CCCcc
Confidence 6778999999888877655444 334589999999999999999999999999999999999999997632 12345
Q ss_pred ceeEeCCCCChHHHHhhcCcHHHHHHHHHHHHHHHHHhhHHHhhhhcccCCCCCCHHHHHHHHHhCcchHHHHHHHHHHH
Q 010072 158 KKEVLLEEHDPLWLELRHAHIADASERLHEKMTSFISKNKAAQIQHSARDGGELSTKDLQKMVQALPQYSDQIDKLSLHV 237 (519)
Q Consensus 158 ~k~~~l~~~D~~~~~~r~~~~~~v~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~lp~~~~~~~~l~~H~ 237 (519)
.+++.++++|+||.++||+||++|++.|.+++++|+++++. ..++..+++||++||++||+|+++++++++|+
T Consensus 288 ~k~~~l~~~D~~~~~~r~~~f~~v~~~l~~~~~~~~~~~~~-------~~~~~~s~~dlk~~v~~lP~~~~~~~~l~~H~ 360 (606)
T 3c98_A 288 VKEVLLDEDDDLWIALRHKHIAEVSQEVTRSLKDFSSSKRM-------NTGEKTTMRDLSQMLKKMPQYQKELSKYSTHL 360 (606)
T ss_dssp EEEEECSTTCHHHHHHTTSBHHHHHHHHHHHHHHHHHHTTC--------------CCSCCCTTTTCGGGHHHHHHHHHHH
T ss_pred ceEeecCCCchhHHHHhccCHHHHHHHHHHHHHHHHHHHhh-------hcccccCHHHHHHHHHHhHHHHHHHHHHHHHH
Confidence 67899999999999999999999999999999999875431 12235578899999999999999999999999
Q ss_pred HHHHHHHHHHHHHhHHHHHHHHHHhhcCCCc--------hHHHHHhhhcCCCCChhhHHHHHHHHHHHcCCCCCchhHHH
Q 010072 238 EIAGKINKIIRELRLRELGQLEQDLVFGDAG--------LKDVVKFFTTNEDVSRENKLRLLMILAAIYPEKFQGEKGQN 309 (519)
Q Consensus 238 ~i~~~i~~~~~~~~l~~~~~lEq~i~~g~~~--------~~~~~~~i~~~~~~~~~dklRLl~L~~l~~~~g~~~~~~~~ 309 (519)
+|+++|++.++ ++|++++++||++++|.+. .+.++++|. ++.++.+|||||+|||++++ +|++++++.+
T Consensus 361 ~ia~~l~~~~~-~~l~~~~e~EQ~l~~~~d~~~~~~~~~~~~i~~ll~-~~~~~~~dkLRL~lLy~l~~-~g~~~~~l~~ 437 (606)
T 3c98_A 361 HLAEDCMKHYQ-GTVDKLCRVEQDLAMGTDAEGEKIKDPMRAIVPILL-DANVSTYDKIRIILLYIFLK-NGITEENLNK 437 (606)
T ss_dssp HHHHHHHHHHT-THHHHHHHHHHHHHHSBCTTSCBCSCTHHHHHHHHT-CTTSCHHHHHHHHHHHHHHT-TSBCHHHHHH
T ss_pred HHHHHHHHHHH-HHHHHHHHHHHHHHhCCCcchhhHHHHHHHHHHHHh-CCCCCHHHHHHHHHHHHHHh-cCCCHHHHHH
Confidence 99999999995 6899999999999998642 246777777 57899999999999999998 6899999999
Q ss_pred HHHHhCCChhHHHHHHHHHHhcCccccCCCCCCCCCcchhhhhhhhcccccCCCCccccccccchHHHHHHHHHHhcCCC
Q 010072 310 IMKLARLQSDDITAVNNMRLLGGASDIKKSSTGAFSLKFDINKKKRAVRKDRTGEEQTWQLSRFYPMIEELIEKLGKREL 389 (519)
Q Consensus 310 llq~~g~~~~~~~~l~~L~~lg~~~~~~~~~~~~~~~~f~~~k~~~~~~~~~~~~~~~y~~s~y~Pl~~~lve~~~~~~l 389 (519)
+++..|++..+..++.+|+++|+...+... ... ......+. .+.+.+|++|||+|+++++++.+++++|
T Consensus 438 ~~~~~~~~~~~~~~i~~l~~lg~~~~~~~~----~~~------~~~~~~~~-~~~~~~~~~s~~~Pll~~lle~l~k~~L 506 (606)
T 3c98_A 438 LIQHAQIPPEDSEIITNMAHLGVPIVTDST----LRR------RSKPERKE-RISEQTYQLSRWTPIIKDIMEDTIEDKL 506 (606)
T ss_dssp HHHHHTCCHHHHHHHHHGGGGTCCCBCCCT----TTC------CCCCCCCC-CCCCCCCTTCCCCCHHHHHHHHHHTTCS
T ss_pred HHHHcCCCHHHHHHHHHHHHhCCccccccc----ccc------ccchhhcc-CCcccccceecchHHHHHHHHHHHhCCC
Confidence 999999999999999999999987653211 100 01111111 2567889999999999999999999999
Q ss_pred CCCCCCCcCCCCCCccccccccccCCCcccccccCCCCCcccCCCCCCCCCCccchhcccccccccCCceEEEEEEcCCC
Q 010072 390 PKDDYPCMNEPSPTVHAKNQSAAISQPPVAHSMRSRRTPTWARPRNSDDGYSSDSVLRHASSDFKKMGQRIFVFIVGGAT 469 (519)
Q Consensus 390 ~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~viVfvvGGvT 469 (519)
+++.||++..+.....+ ....+.+++.|.+...+.. ...+++||||||||||
T Consensus 507 ~~~~~p~~~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~~---------------~~~~~~iIVFvvGGvT 558 (606)
T 3c98_A 507 DTKHYPYISTRSSASFS-------------TTAVSARYGHWHKNKAPGE---------------YRSGPRLIIFILGGVS 558 (606)
T ss_dssp CTTTSCCSSCC------------------------------------------------------CCCSEEEEEEETCEE
T ss_pred CcccCcccCCCCccccc-------------ccccccccCCccccCCCCC---------------CCCCCEEEEEEECCcC
Confidence 99999998754422110 0112223356765433221 1356889999999999
Q ss_pred HHHHHHHHHHHhhc-CCeEEEccccccChhHHHHHHhccCCCC
Q 010072 470 RSELRVCHKLTRKL-NREIILGSTSLDDPPQFITKMKMLTVDE 511 (519)
Q Consensus 470 y~Ei~al~~l~~~~-~~~iiigsT~I~~~~~fl~~l~~l~~~~ 511 (519)
|+|++++|+|+++. +++||||||+|+||++||++|+.|++++
T Consensus 559 y~E~~~l~~ls~~~~~~~viiGsT~Iln~~~fl~~L~~L~k~~ 601 (606)
T 3c98_A 559 LNEMRCAYEVTQANGKWEVLIGSTHILTPQKLLDTLKKLNKTD 601 (606)
T ss_dssp HHHHHHHHHHHHHHSSCEEEEEESSEECHHHHHHHHTTTTSCC
T ss_pred HHHHHHHHHHHHHcCCcEEEEEeCCeeCHHHHHHHHHHhCCCc
Confidence 99999999998865 5799999999999999999999998764
No 6
>1mqs_A SLY1 protein, SLY1P; SM-protein, snare, syntaxin, endocytosis/exocytosis complex; 3.00A {Saccharomyces cerevisiae} SCOP: e.25.1.1
Probab=100.00 E-value=3e-71 Score=612.45 Aligned_cols=453 Identities=16% Similarity=0.259 Sum_probs=320.0
Q ss_pred CceeeeeeecCCCeEEeCCCcchhhhcCCCCCchhhhHHHHHHHHHHHHHHHHhCCCceEEEecCCCcccccccccccch
Q 010072 1 MQMNLEYFAIDSQGFVTDDERALEELFGDEENSRRGDACLNVMASRIATVFASLREFPLVRYRAAKSLDTMTMTTFSDLI 80 (519)
Q Consensus 1 ~E~~~df~~ld~~lfsl~~~~~~~~l~~~~~~~~~~~~~l~~ia~~L~sl~~~lg~~P~Ir~~~~~~~~~~~~~~~~~~i 80 (519)
.|+++||+|+|+|+|||++|++|..+|.+..+....+..++++|++|++||.++|.+|.|||..+. .
T Consensus 162 ~e~~ldfiple~dlfsL~~p~s~~~l~~~~~~d~~~~~~l~~ia~~L~sl~~~lg~~P~IRy~~g~-------------~ 228 (671)
T 1mqs_A 162 YDQYLDFIVTEPELFSLEISNAYLTLNDPKTTEEEITGLCANIADGLFNTVLTINSIPIIRAAKGG-------------P 228 (671)
T ss_dssp EECCCCSEECSTTEEECCCCSHHHHHHCSSSCTTHHHHHHHHHHHHHHHHHHHHTCCCEEEECSSS-------------H
T ss_pred EEEccceeeccCCEEEecCchHHHHhcCCCccchhHHHHHHHHHHHHHHHHHhcCCCCEEEeCCCC-------------h
Confidence 489999999999999999999999999876544444578999999999999999999999985442 2
Q ss_pred HHHHHHHHHHHHHHhhhhc--CCC------CCCCCeeEEEecCCCCccccchhhhhhhHHHhhhcccCCCeEEeeccCCC
Q 010072 81 PTKLAAGVWNCLMKYKQSI--ENF------PQTETCDLLILDRSVDQVAPIIHEWTYDAICRDLLNMEGNKYVHEVPSKT 152 (519)
Q Consensus 81 ~~~la~~l~~~l~~~~~~~--~~~------~~~~~~~LiIlDR~~DliTPLlh~~TYqall~dl~~I~~~~v~~~~~~~~ 152 (519)
|+++|+++...+....... ..| +...+++|||+||++|++|||+||||||||+||+|||++|+|+++.+...
T Consensus 229 a~~va~~L~~~l~~~~~~~~~~lf~~~~~~~~~~~~~LiIlDR~~DlvTPLlhq~TYqaLi~Dll~I~~n~v~~~~~~~~ 308 (671)
T 1mqs_A 229 AEIIAEKLGTKLRDFVINTNSSSTSTLQGNDSLERGVLIILDRNIDFASMFSHSWIYQCMVFDIFKLSRNTVTIPLESKE 308 (671)
T ss_dssp HHHHHHHHHHHHHHHHHTTCC------------CCCEEEEEEGGGCSHHHHCCCCBHHHHHHHHTTCCSSCEEECC----
T ss_pred HHHHHHHHHHHHHHHHhhccccccccccCCCCCCCCEEEEecCCccchhhhcccchHHHHHHHHhhccCCEEEEeccCCC
Confidence 4555555555554432211 123 12358899999999999999999999999999999999999999753221
Q ss_pred CC-------CCcceeEeCCCCChHHHHhhcCcHHHHHHHHHHHHHHHHHhhHHHhhhhc--cc------CCCCCCHHHHH
Q 010072 153 GG-------PPEKKEVLLEEHDPLWLELRHAHIADASERLHEKMTSFISKNKAAQIQHS--AR------DGGELSTKDLQ 217 (519)
Q Consensus 153 g~-------~~~~k~~~l~~~D~~~~~~r~~~~~~v~~~l~~~~~~~~~~~~~~~~~~~--~~------~~~~~~~~~~~ 217 (519)
++ ..+++++.|+++|+||.++||+||++|++.|.+++++|+++++ ++++. .. .+...++++|+
T Consensus 309 ~~~~~~~~~~~~~k~~~L~~~D~~w~~~r~~~f~~v~~~l~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~s~~~lk 386 (671)
T 1mqs_A 309 NGTDNTTAKPLATKKYDIEPNDFFWMENSHLPFPEAAENVEAALNTYKEEAA--EITRKTGVTNISDLDPNSNNDTVQIQ 386 (671)
T ss_dssp -----------CCEEECCCSSCTTHHHHSSSBHHHHHHHHHHHHHHHHHHHH--HHHHHC--------------------
T ss_pred ccccccccccccceEEecCCCCHHHHHHhcccHHHHHHHHHHHHHHHHHHHH--HHhcccCccCcccccccccccHHHHH
Confidence 10 1345889999999999999999999999999999999998753 23320 00 11246799999
Q ss_pred HHHHhCcchHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHhhcCCCchHHHHHhhhcCCCCChhhHHHHHHHHHHH
Q 010072 218 KMVQALPQYSDQIDKLSLHVEIAGKINKIIRELRLRELGQLEQDLVFGDAGLKDVVKFFTTNEDVSRENKLRLLMILAAI 297 (519)
Q Consensus 218 ~~v~~lp~~~~~~~~l~~H~~i~~~i~~~~~~~~l~~~~~lEq~i~~g~~~~~~~~~~i~~~~~~~~~dklRLl~L~~l~ 297 (519)
+||++||+|+++++.+++|++||++|++.+++++|++++++||+++ +....++++++|.+....+.+|||||+|||+++
T Consensus 387 ~~V~~LP~~~~~~~~l~~H~~ia~~l~~~i~~~~l~~~~e~EQ~l~-~~~~~~~i~~ll~~~~~~~~~dkLRLl~Ly~l~ 465 (671)
T 1mqs_A 387 EVVKKLPELTAKKNTIDTHMNIFAALLSQLESKSLDTFFEVEQDPG-STKTRSRFLDILKDGKTNNLEDKLRSFIVLYLT 465 (671)
T ss_dssp CCCCSCHHHHHHHHHHHHHHHHHHHHHHHHHTTTCHHHHHHTSCCS-SHHHHHHHHHHTTSCCSTTHHHHHHHHHHHHHH
T ss_pred HHHHHhHHHHHHHHHHHHHHHHHHHHHHHHhHhhHHHHHHHHHHHh-cCchHHHHHHHHhCcCCCCHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999997 433346788899742345999999999999999
Q ss_pred cCCCCCchhH---HHHHHHhCCChhHHHHHHHHHHhcCcc---c--cC---C--CC--CCC-CCcchhhhhhhhcccccC
Q 010072 298 YPEKFQGEKG---QNIMKLARLQSDDITAVNNMRLLGGAS---D--IK---K--SS--TGA-FSLKFDINKKKRAVRKDR 361 (519)
Q Consensus 298 ~~~g~~~~~~---~~llq~~g~~~~~~~~l~~L~~lg~~~---~--~~---~--~~--~~~-~~~~f~~~k~~~~~~~~~ 361 (519)
+++|++++++ ++.++.+|++...+..+.++..++... . .. + .. .+. |+..+. +-..+.+....
T Consensus 466 ~~~g~~~~~~~~l~~~l~~~G~~~~~~~~l~~~~~l~~~~~l~~~~~~~~~~~~~~~~~~dl~~~~~~-r~~~~~~~~g~ 544 (671)
T 1mqs_A 466 STTGLPKDFVQNVENYFKENDYDINALKYVYKLREFMQLSNMSLQNKSLEDGSDSAFKPSNLTLSGIY-GLTEGKLQGGV 544 (671)
T ss_dssp CSSCCCHHHHHHHHHHHHTTTCCCTHHHHHHHHHHHHHHHHHHSCCCCC------------------C-HHHHHTTTSSC
T ss_pred cCCCCCHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHhcccccccccccccccccccccccccccccHH-HHHHHHhccch
Confidence 8328888774 556688999766666666665543211 0 00 0 00 011 211110 00011111000
Q ss_pred ----CCCccccccccchHHHHHHHHHHhcC-----C--CCCCCCCCcCCCCCCccccccccccCCCcccccccCCCCCcc
Q 010072 362 ----TGEEQTWQLSRFYPMIEELIEKLGKR-----E--LPKDDYPCMNEPSPTVHAKNQSAAISQPPVAHSMRSRRTPTW 430 (519)
Q Consensus 362 ----~~~~~~y~~s~y~Pl~~~lve~~~~~-----~--l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~ 430 (519)
.+...-|+ ..+.|.++++++.+.++ + ++.++||++++.... +. .+...
T Consensus 545 ~~~~~~v~n~~P-~~~~~~l~~ive~l~~~~~~~~k~~l~~~~y~~~~p~~~~--~~------------~~~~~------ 603 (671)
T 1mqs_A 545 GSLISGIKKLLP-EKKTIPITNVVDAIMDPLNSSQKNLETTDSYLYIDPKITR--GS------------HTRKP------ 603 (671)
T ss_dssp SSSHHHHHHTCC-CCCCCHHHHHHHHHHCSTTSCHHHHHHHTTSEEECTTSSS--CS------------SSCCC------
T ss_pred hhHHHhHHhhCC-CcccchHHHHHHHHHhccccccccCCCccCceeeCCCCcC--CC------------CCCCc------
Confidence 00011111 24566799999999998 3 567889998632110 00 00000
Q ss_pred cCCCCCCCCCCccchhcccccccccCCceEEEEEEcCCCHHHHHHHHHHHhhc---CCeEEEccccccChhHHHHHHhcc
Q 010072 431 ARPRNSDDGYSSDSVLRHASSDFKKMGQRIFVFIVGGATRSELRVCHKLTRKL---NREIILGSTSLDDPPQFITKMKML 507 (519)
Q Consensus 431 ~~~~~~~~~~~~~s~~~~~~~~~~~~~~~viVfvvGGvTy~Ei~al~~l~~~~---~~~iiigsT~I~~~~~fl~~l~~l 507 (519)
.+.+++++||||||||||+|++++|+|+++. +++|+||||+|+||++||++|..|
T Consensus 604 ----------------------~~~~~~~viVFvVGG~Ty~E~~~l~~l~~~~~~~~~~viiGsT~I~n~~~Fl~~l~~l 661 (671)
T 1mqs_A 604 ----------------------KRQSYNKSLVFVVGGGNYLEYQNLQEWAHSQLHNPKKVMYGSTAITTPAEFLNEISRL 661 (671)
T ss_dssp ----------------------CCCCCSEEEEEEETCBCHHHHHHHHHHHTTCCSSCCEEEEEESSBCCHHHHHHHHHHH
T ss_pred ----------------------ccCCCCeEEEEEECCccHHHHHHHHHHHhhccCCCceEEEeeccccCHHHHHHHHHHh
Confidence 0124689999999999999999999999983 799999999999999999999999
Q ss_pred CCCCCC
Q 010072 508 TVDELS 513 (519)
Q Consensus 508 ~~~~~~ 513 (519)
++...+
T Consensus 662 ~~~~~~ 667 (671)
T 1mqs_A 662 GASNSS 667 (671)
T ss_dssp HHHTTC
T ss_pred Cccccc
Confidence 876533
No 7
>3he4_B Synzip5; heterodimeric coiled-coil, de novo protein; 2.46A {Artificial gene}
Probab=42.89 E-value=37 Score=21.70 Aligned_cols=32 Identities=22% Similarity=0.400 Sum_probs=25.1
Q ss_pred CCHHHHHHHHHhCcchHHHHHHHHHHHHHHHH
Q 010072 211 LSTKDLQKMVQALPQYSDQIDKLSLHVEIAGK 242 (519)
Q Consensus 211 ~~~~~~~~~v~~lp~~~~~~~~l~~H~~i~~~ 242 (519)
.++.++++++..|.+-..+.+++.-|+..+.+
T Consensus 3 ntvkelknyiqeleernaelknlkehlkfaka 34 (46)
T 3he4_B 3 NTVKELKNYIQELEERNAELKNLKEHLKFAKA 34 (46)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred chHHHHHHHHHHHHHHhHHHHhHHHHHHHHHH
Confidence 46788889998888877788888888876644
No 8
>1tqx_A D-ribulose-5-phosphate 3-epimerase, putative; structural genomics, protein structure initiative, PSI; 2.00A {Plasmodium falciparum} SCOP: c.1.2.2
Probab=37.79 E-value=22 Score=32.93 Aligned_cols=41 Identities=15% Similarity=0.152 Sum_probs=31.5
Q ss_pred eEEEEEEcCCCHHHHHHHHHHHhhcCCeEEEccccccChhHHHHH
Q 010072 459 RIFVFIVGGATRSELRVCHKLTRKLNREIILGSTSLDDPPQFITK 503 (519)
Q Consensus 459 ~viVfvvGGvTy~Ei~al~~l~~~~~~~iiigsT~I~~~~~fl~~ 503 (519)
.+.|.|-||++-.-+..+.+. |.+++|.|+.|++.++.-+.
T Consensus 173 ~~~I~VdGGI~~~ti~~~~~a----GAd~~V~GsaIf~~~d~~~~ 213 (227)
T 1tqx_A 173 NLNIQVDGGLNIETTEISASH----GANIIVAGTSIFNAEDPKYV 213 (227)
T ss_dssp TCEEEEESSCCHHHHHHHHHH----TCCEEEESHHHHTCSSHHHH
T ss_pred CCeEEEECCCCHHHHHHHHHc----CCCEEEEeHHHhCCCCHHHH
Confidence 567999999998866666543 89999999999976444333
No 9
>1y0e_A Putative N-acetylmannosamine-6-phosphate 2-epimer; mannac-6-P epimerase, NANE, structural genomics, protein STR initiative, PSI; 1.95A {Staphylococcus aureus subsp} SCOP: c.1.2.5
Probab=27.46 E-value=51 Score=29.73 Aligned_cols=45 Identities=11% Similarity=0.138 Sum_probs=36.6
Q ss_pred eEEEEEEcCC-CHHHHHHHHHHHhhcCCeEEEccccccChhHHHHHHhcc
Q 010072 459 RIFVFIVGGA-TRSELRVCHKLTRKLNREIILGSTSLDDPPQFITKMKML 507 (519)
Q Consensus 459 ~viVfvvGGv-Ty~Ei~al~~l~~~~~~~iiigsT~I~~~~~fl~~l~~l 507 (519)
.+-|+..||+ |...+..+... |.+.++.++.+..|....+.+.+.
T Consensus 175 ~ipvia~GGI~~~~~~~~~~~~----Gad~v~vG~al~~p~~~~~~~~~~ 220 (223)
T 1y0e_A 175 DAKVIAEGNVITPDMYKRVMDL----GVHCSVVGGAITRPKEITKRFVQV 220 (223)
T ss_dssp CSEEEEESSCCSHHHHHHHHHT----TCSEEEECHHHHCHHHHHHHHHHT
T ss_pred CCCEEEecCCCCHHHHHHHHHc----CCCEEEEChHHcCcHHHHHHHHHH
Confidence 4678999999 88888777653 888888889999999888887643
No 10
>3cu2_A Ribulose-5-phosphate 3-epimerase; YP_718263.1, ribulose-PHOS epimerase family, structural genomics, joint center for STR genomics, JCSG; 1.91A {Haemophilus somnus}
Probab=27.24 E-value=40 Score=31.37 Aligned_cols=43 Identities=12% Similarity=0.138 Sum_probs=31.4
Q ss_pred eEEEEEEcCCCHHHHHHHHHHHhhcCCeEEEccccccChhHHHHHH
Q 010072 459 RIFVFIVGGATRSELRVCHKLTRKLNREIILGSTSLDDPPQFITKM 504 (519)
Q Consensus 459 ~viVfvvGGvTy~Ei~al~~l~~~~~~~iiigsT~I~~~~~fl~~l 504 (519)
.+.|.+-||++-..+..+.. ...|.+++|.++.|+.. +.-+.+
T Consensus 187 ~~~I~vdGGI~~~~~~~~~~--~~aGad~~VvGSaIf~~-d~~~~~ 229 (237)
T 3cu2_A 187 EKLINIDGSMTLELAKYFKQ--GTHQIDWLVSGSALFSG-ELKTNL 229 (237)
T ss_dssp GCEEEEESSCCHHHHHHHHH--SSSCCCCEEECGGGGSS-CHHHHH
T ss_pred CceEEEECCcCHHHHHHHHH--hCCCCcEEEEeeHHhCC-CHHHHH
Confidence 46799999999877766543 11489999999999965 433333
No 11
>1h1y_A D-ribulose-5-phosphate 3-epimerase; oxidative pentose phosphate pathway, isomerase; 1.87A {Oryza sativa} SCOP: c.1.2.2 PDB: 1h1z_A
Probab=26.74 E-value=26 Score=32.19 Aligned_cols=40 Identities=15% Similarity=0.139 Sum_probs=29.2
Q ss_pred eEEEEEEcCCCHHHHHHHHHHHhhcCCeEEEccccccChhHHHH
Q 010072 459 RIFVFIVGGATRSELRVCHKLTRKLNREIILGSTSLDDPPQFIT 502 (519)
Q Consensus 459 ~viVfvvGGvTy~Ei~al~~l~~~~~~~iiigsT~I~~~~~fl~ 502 (519)
.+-|++.||++-.-+..+... |.++++.++.|+..++.-+
T Consensus 173 ~~pi~v~GGI~~~ni~~~~~a----GaD~vvvGsai~~~~d~~~ 212 (228)
T 1h1y_A 173 SLDIEVDGGLGPSTIDVAASA----GANCIVAGSSIFGAAEPGE 212 (228)
T ss_dssp TSEEEEESSCSTTTHHHHHHH----TCCEEEESHHHHTSSCHHH
T ss_pred CCCEEEECCcCHHHHHHHHHc----CCCEEEECHHHHCCCCHHH
Confidence 456899999998655444332 8999999999997654433
No 12
>3ctl_A D-allulose-6-phosphate 3-epimerase; D-glucitol 6-phosphate, (beta/alpha)8 barrel, carbohydrate metabolism, isomerase; HET: S6P; 2.20A {Escherichia coli} PDB: 3ct7_A*
Probab=26.16 E-value=38 Score=31.31 Aligned_cols=43 Identities=7% Similarity=0.072 Sum_probs=32.5
Q ss_pred eEEEEEEcCCCHHHHHHHHHHHhhcCCeEEEcc-ccccChh----HHHHHHh
Q 010072 459 RIFVFIVGGATRSELRVCHKLTRKLNREIILGS-TSLDDPP----QFITKMK 505 (519)
Q Consensus 459 ~viVfvvGGvTy~Ei~al~~l~~~~~~~iiigs-T~I~~~~----~fl~~l~ 505 (519)
.+.|.|-||++-..+..+.+. |.+++|.| +.|++.. .-++.|+
T Consensus 167 ~~~I~VdGGI~~~~~~~~~~a----GAd~~V~G~saif~~~d~~~~~~~~l~ 214 (231)
T 3ctl_A 167 EYEIEVDGSCNQATYEKLMAA----GADVFIVGTSGLFNHAENIDEAWRIMT 214 (231)
T ss_dssp CCEEEEESCCSTTTHHHHHHH----TCCEEEECTTTTGGGCSSHHHHHHHHH
T ss_pred CceEEEECCcCHHHHHHHHHc----CCCEEEEccHHHhCCCCcHHHHHHHHH
Confidence 577999999998877777554 89999999 9999643 4444443
No 13
>2nv1_A Pyridoxal biosynthesis lyase PDXS; (beta/alpha)8-barrel, synthase; 2.08A {Bacillus subtilis} PDB: 2nv2_A* 1znn_A
Probab=21.05 E-value=54 Score=31.52 Aligned_cols=43 Identities=16% Similarity=0.358 Sum_probs=31.3
Q ss_pred EEEEEEcCC-CHHHHHHHHHHHhhcCCeEEEcccccc---ChhHHHHHHhc
Q 010072 460 IFVFIVGGA-TRSELRVCHKLTRKLNREIILGSTSLD---DPPQFITKMKM 506 (519)
Q Consensus 460 viVfvvGGv-Ty~Ei~al~~l~~~~~~~iiigsT~I~---~~~~fl~~l~~ 506 (519)
|++|..||+ |...+..+.. .|.+.++.++.++ +|..+++.+..
T Consensus 210 vi~~a~GGI~~~~d~~~~~~----~GadgV~vGsai~~~~~p~~~~~~l~~ 256 (305)
T 2nv1_A 210 VVNFAAGGVATPADAALMMQ----LGADGVFVGSGIFKSDNPAKFAKAIVE 256 (305)
T ss_dssp SCEEBCSCCCSHHHHHHHHH----TTCSCEEECGGGGGSSCHHHHHHHHHH
T ss_pred EEEEeccCCCCHHHHHHHHH----cCCCEEEEcHHHHcCCCHHHHHHHHHH
Confidence 577899999 8887776554 4888888888887 55556666543
No 14
>3ovp_A Ribulose-phosphate 3-epimerase; iron binding, isomerase; HET: XPE; 1.70A {Homo sapiens} SCOP: c.1.2.0 PDB: 3ovq_A* 3ovr_A* 3qc3_A
Probab=20.07 E-value=40 Score=31.07 Aligned_cols=38 Identities=11% Similarity=0.260 Sum_probs=28.4
Q ss_pred eEEEEEEcCCCHHHHHHHHHHHhhcCCeEEEccccccChhHH
Q 010072 459 RIFVFIVGGATRSELRVCHKLTRKLNREIILGSTSLDDPPQF 500 (519)
Q Consensus 459 ~viVfvvGGvTy~Ei~al~~l~~~~~~~iiigsT~I~~~~~f 500 (519)
.+.|.|-||++-.-++.+.+ .|.+++|.|+.|+.+++.
T Consensus 169 ~~~I~VdGGI~~~t~~~~~~----aGAd~~VvGsaIf~a~dp 206 (228)
T 3ovp_A 169 SLDIEVDGGVGPDTVHKCAE----AGANMIVSGSAIMRSEDP 206 (228)
T ss_dssp TCEEEEESSCSTTTHHHHHH----HTCCEEEESHHHHTCSCH
T ss_pred CCCEEEeCCcCHHHHHHHHH----cCCCEEEEeHHHhCCCCH
Confidence 46789999999655555443 389999999999965433
Done!