BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 010074
(519 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|2HI4|A Chain A, Crystal Structure Of Human Microsomal P450 1a2 In Complex
With Alpha-Naphthoflavone
Length = 495
Score = 145 bits (367), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 122/463 (26%), Positives = 214/463 (46%), Gaps = 32/463 (6%)
Query: 67 PVGWPIVGTLPCMGSLAHRKLASMAASLGANRLMALSFGPTRVIISSHPETAKEIL--SG 124
P GWP++G + +G H L+ M+ G ++ + G T V++ S +T ++ L G
Sbjct: 21 PWGWPLLGHVLTLGKNPHLALSRMSQRYGD--VLQIRIGSTPVLVLSRLDTIRQALVRQG 78
Query: 125 PSFSDRPIKESARLLMFERAIGFAP-SGKYWRHLRRIAAN--HMFS----PRRISG--LE 175
F RP ++ L+ +++ F+ SG W RR+A N + FS P S LE
Sbjct: 79 DDFKGRPDLYTSTLITDGQSLTFSTDSGPVWAARRRLAQNALNTFSIASDPASSSSCYLE 138
Query: 176 ILRQRLADEMLSKVNQQMENKGVVR-VREVLQKGSLGNILESLFGGSVISLKKEELEAMV 234
+ A ++S++ + M G +V+ S+ N++ ++ G +E+ ++V
Sbjct: 139 EHVSKEAKALISRLQELMAGPGHFDPYNQVVV--SVANVIGAMCFGQHFPESSDEMLSLV 196
Query: 235 KEGYELI---AQFNWEDYFPLNLLDFYGVKRRCHKLAARVKTLIGQVVEERKKNSGEFNN 291
K +E + + N D+FP+ +R R + + V+E ++ + N
Sbjct: 197 KNTHEFVETASSGNPLDFFPILRYLPNPALQRFKAFNQRFLWFLQKTVQEHYQDFDK--N 254
Query: 292 GGNDFLSALLSLPKE------DQLSDADTVAILWEMVFRGTDTVAILLEWIMARIVLHQD 345
D AL K+ + + V ++ ++ G DTV + W + +V +
Sbjct: 255 SVRDITGALFKHSKKGPRASGNLIPQEKIVNLVNDIFGAGFDTVTTAISWSLMYLVTKPE 314
Query: 346 IQTKVQNEIDTWVGRDRHVEDSDISSLPYLQAIVKEVLRMHPPGPLLSWARLAVHDVHVD 405
IQ K+Q E+DT +GR+R SD LPYL+A + E R H + D ++
Sbjct: 315 IQRKIQKELDTVIGRERRPRLSDRPQLPYLEAFILETFR-HSSFLPFTIPHSTTRDTTLN 373
Query: 406 KVFVPAGTTAMVNMWAITHDPTIWKNPWTFKPERFIEEDVPILGSDL--RLAPFGSGRRV 463
++P VN W + HDP +W++P F+PERF+ D + L ++ FG G+R
Sbjct: 374 GFYIPKKCCVFVNQWQVNHDPELWEDPSEFRPERFLTADGTAINKPLSEKMMLFGMGKRR 433
Query: 464 CPGKALGLATVHLWLARLLHR--FRWLPAEPVDLSETLKLSLE 504
C G+ L + L+LA LL + F P VDL+ L+++
Sbjct: 434 CIGEVLAKWEIFLFLAILLQQLEFSVPPGVKVDLTPIYGLTMK 476
>pdb|3PM0|A Chain A, Structural Characterization Of The Complex Between Alpha-
Naphthoflavone And Human Cytochrome P450 1b1 (Cyp1b1)
Length = 507
Score = 141 bits (355), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 120/478 (25%), Positives = 207/478 (43%), Gaps = 53/478 (11%)
Query: 66 GPVGWPIVGTLPCMGSLAHRKLASMAASLGANRLMALSFGPTRVIISSHPETAKEILSGP 125
GP WP++G +G AH A +A G + L P V+ + G
Sbjct: 13 GPFAWPLIGNAAAVGQAAHLSFARLARRYGDVFQIRLGSCPIVVLNGERAIHQALVQQGS 72
Query: 126 SFSDRPIKESARLLMFERAIGFAPSGKYWRHLRRIAANHM--FSPRRISGLEILRQRL-- 181
+F+DRP S R++ R++ F ++W+ RR A + M F R+ ++L +
Sbjct: 73 AFADRPSFASFRVVSGGRSMAFGHYSEHWKVQRRAAHSMMRNFFTRQPRSRQVLEGHVLS 132
Query: 182 -ADEMLSKVNQQMENKGVVRVREVLQKGSLGNILESLFGGSVISLKKEELEAMVKEGYE- 239
A E+++ + + + + R L ++ N++ ++ G S E ++ E
Sbjct: 133 EARELVALLVRGSADGAFLDPRP-LTVVAVANVMSAVCFGCRYSHDDPEFRELLSHNEEF 191
Query: 240 --------LIAQFNWEDYFP--------------LNLLDFYGVK--RRCHKL---AARVK 272
L+ W YFP N +F K R C L AA
Sbjct: 192 GRTVGAGSLVDVMPWLQYFPNPVRTVFREFEQLNRNFSNFILDKFLRHCESLRPGAAPRD 251
Query: 273 TLIGQVVEERKKNSGEFNNGGNDFLSALLSLPKEDQLSDADTVAILWEMVFRGTDTVAIL 332
+ ++ KK +G+ + GG +L + A + ++ DT++
Sbjct: 252 MMDAFILSAEKKAAGDSHGGGA-------------RLDLENVPATITDIFGASQDTLSTA 298
Query: 333 LEWIMARIVLHQDIQTKVQNEIDTWVGRDRHVEDSDISSLPYLQAIVKEVLRMHPPGPLL 392
L+W++ + D+QT+VQ E+D VGRDR D +LPY+ A + E +R P +
Sbjct: 299 LQWLLLLFTRYPDVQTRVQAELDQVVGRDRLPCMGDQPNLPYVLAFLYEAMRFSSFVP-V 357
Query: 393 SWARLAVHDVHVDKVFVPAGTTAMVNMWAITHDPTIWKNPWTFKPERFIEEDVPILGSDL 452
+ + V +P T VN W++ HDP W NP F P RF+++D ++ DL
Sbjct: 358 TIPHATTANTSVLGYHIPKDTVVFVNQWSVNHDPLKWPNPENFDPARFLDKD-GLINKDL 416
Query: 453 --RLAPFGSGRRVCPGKALGLATVHLWLARLLHR--FRWLPAEPVDLSETLKLSLEMK 506
R+ F G+R C G+ L + L+++ L H+ FR P EP ++ + L+++ K
Sbjct: 417 TSRVMIFSVGKRRCIGEELSKMQLFLFISILAHQCDFRANPNEPAKMNFSYGLTIKPK 474
>pdb|4I8V|A Chain A, Human Cytochrome P450 1a1 In Complex With
Alpha-naphthoflavone
pdb|4I8V|B Chain B, Human Cytochrome P450 1a1 In Complex With
Alpha-naphthoflavone
pdb|4I8V|C Chain C, Human Cytochrome P450 1a1 In Complex With
Alpha-naphthoflavone
pdb|4I8V|D Chain D, Human Cytochrome P450 1a1 In Complex With
Alpha-naphthoflavone
Length = 491
Score = 139 bits (351), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 127/466 (27%), Positives = 207/466 (44%), Gaps = 33/466 (7%)
Query: 66 GPVGWPIVGTLPCMGSLAHRKLASMAASLGANRLMALSFGPTRVIISSHPETAKEIL--S 123
GP GWP++G + +G H L+ M+ G ++ + G T V++ S +T ++ L
Sbjct: 15 GPWGWPLIGHMLTLGKNPHLALSRMSQQYGD--VLQIRIGSTPVVVLSGLDTIRQALVRQ 72
Query: 124 GPSFSDRPIKESARLLMFERAIGFAP-SGKYWRHLRRIAANHMFSPRRISG--------L 174
G F RP + L+ +++ F+P SG W RR+A N + S S L
Sbjct: 73 GDDFKGRPDLYTFTLISNGQSMSFSPDSGPVWAARRRLAQNGLKSFSIASDPASSTSCYL 132
Query: 175 EILRQRLADEMLSKVNQQMENKGVVR-VREVLQKGSLGNILESLFGGSVISLKKEELEAM 233
E + A+ ++S + + M G R V+ S+ N++ ++ G +EL ++
Sbjct: 133 EEHVSKEAEVLISTLQELMAGPGHFNPYRYVVV--SVTNVICAICFGRRYDHNHQELLSL 190
Query: 234 VKEGY---ELIAQFNWEDYFPLNLLDFYGVKRRCHKLAARVKTLIGQVVEERKKNSGEFN 290
V E++ N D+ P+ L + + + ++V+E K F
Sbjct: 191 VNLNNNFGEVVGSGNPADFIPILRYLPNPSLNAFKDLNEKFYSFMQKMVKEHYKT---FE 247
Query: 291 NGG-NDFLSALLSLPKED--------QLSDADTVAILWEMVFRGTDTVAILLEWIMARIV 341
G D +L+ +E QLSD + I+ ++ G DTV + W + +V
Sbjct: 248 KGHIRDITDSLIEHCQEKQLDENANVQLSDEKIINIVLDLFGAGFDTVTTAISWSLMYLV 307
Query: 342 LHQDIQTKVQNEIDTWVGRDRHVEDSDISSLPYLQAIVKEVLRMHPPGPLLSWARLAVHD 401
++ +Q K+Q E+DT +GR R SD S LPY++A + E R H + D
Sbjct: 308 MNPRVQRKIQEELDTVIGRSRRPRLSDRSHLPYMEAFILETFR-HSSFVPFTIPHSTTRD 366
Query: 402 VHVDKVFVPAGTTAMVNMWAITHDPTIWKNPWTFKPERFIEEDVPILGS-DLRLAPFGSG 460
+ ++P G VN W I HD +W NP F PERF+ D I ++ FG G
Sbjct: 367 TSLKGFYIPKGRCVFVNQWQINHDQKLWVNPSEFLPERFLTPDGAIDKVLSEKVIIFGMG 426
Query: 461 RRVCPGKALGLATVHLWLARLLHRFRWLPAEPVDLSETLKLSLEMK 506
+R C G+ + V L+LA LL R + V + T L MK
Sbjct: 427 KRKCIGETIARWEVFLFLAILLQRVEFSVPLGVKVDMTPIYGLTMK 472
>pdb|3RUK|A Chain A, Human Cytochrome P450 Cyp17a1 In Complex With Abiraterone
pdb|3RUK|B Chain B, Human Cytochrome P450 Cyp17a1 In Complex With Abiraterone
pdb|3RUK|C Chain C, Human Cytochrome P450 Cyp17a1 In Complex With Abiraterone
pdb|3RUK|D Chain D, Human Cytochrome P450 Cyp17a1 In Complex With Abiraterone
pdb|3SWZ|A Chain A, Human Cytochrome P450 17a1 In Complex With Tok-001
pdb|3SWZ|B Chain B, Human Cytochrome P450 17a1 In Complex With Tok-001
pdb|3SWZ|C Chain C, Human Cytochrome P450 17a1 In Complex With Tok-001
pdb|3SWZ|D Chain D, Human Cytochrome P450 17a1 In Complex With Tok-001
Length = 494
Score = 118 bits (296), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 115/446 (25%), Positives = 193/446 (43%), Gaps = 48/446 (10%)
Query: 71 PIVGTLPCMGSLAHRKLASMAASLGANRLMALSFGPTRVIISSHPETAKEIL--SGPSFS 128
P+VG+LP + H + ++ G +I H + AKE+L G FS
Sbjct: 17 PLVGSLPFLPRHGHMHNNFFKLQKKYGPIYSVRMGTKTTVIVGHHQLAKEVLIKKGKDFS 76
Query: 129 DRPIKESARLLMFER-AIGFAPSGKYWRHLRRIAANH--MFSPRRISGLEILRQRLAD-- 183
RP + + R I FA SG +W+ RR+A +F +I+ Q ++
Sbjct: 77 GRPQMATLDIASNNRKGIAFADSGAHWQLHRRLAMATFALFKDGDQKLEKIICQEISTLC 136
Query: 184 EMLSKVNQQMENKGV---VRVREVLQKGSLG----------NILESLFGGSVISLKKEEL 230
+ML+ N Q + V V V+ N++++ G + +L K+ L
Sbjct: 137 DMLATHNGQSIDISFPVFVAVTNVISLICFNTSYKNGDPELNVIQNYNEGIIDNLSKDSL 196
Query: 231 EAMV--------KEGYELIAQFNWEDYFPLNLLDFYGVKRRCHKLAARVKTLIGQVVEER 282
+V K +L + + +L+ Y K R + + TL+ +
Sbjct: 197 VDLVPWLKIFPNKTLEKLKSHVKIRNDLLNKILENYKEKFRSDSITNMLDTLM-----QA 251
Query: 283 KKNSGEFNNGGNDFLSALLSLPKEDQ--LSDADTVAILWEMVFRGTDTVAILLEWIMARI 340
K NS N G P +D LSD + + ++ G +T +++W +A +
Sbjct: 252 KMNSDNGNAG-----------PDQDSELLSDNHILTTIGDIFGAGVETTTSVVKWTLAFL 300
Query: 341 VLHQDIQTKVQNEIDTWVGRDRHVEDSDISSLPYLQAIVKEVLRMHPPGPLLSWARLAVH 400
+ + ++ K+ EID VG R SD + L L+A ++EVLR+ P P+L + V
Sbjct: 301 LHNPQVKKKLYEEIDQNVGFSRTPTISDRNRLLLLEATIREVLRLRPVAPMLIPHKANV- 359
Query: 401 DVHVDKVFVPAGTTAMVNMWAITHDPTIWKNPWTFKPERFIE-EDVPILGSDLRLAPFGS 459
D + + V GT ++N+WA+ H+ W P F PERF+ ++ + PFG+
Sbjct: 360 DSSIGEFAVDKGTEVIINLWALHHNEKEWHQPDQFMPERFLNPAGTQLISPSVSYLPFGA 419
Query: 460 GRRVCPGKALGLATVHLWLARLLHRF 485
G R C G+ L + L +A LL RF
Sbjct: 420 GPRSCIGEILARQELFLIMAWLLQRF 445
>pdb|1W0E|A Chain A, Crystal Structure Of Human Cytochrome P450 3a4
pdb|1W0F|A Chain A, Crystal Structure Of Human Cytochrome P450 3a4
pdb|1W0G|A Chain A, Crystal Structure Of Human Cytochrome P450 3a4
pdb|2J0D|A Chain A, Crystal Structure Of Human P450 3a4 In Complex With
Erythromycin
pdb|2J0D|B Chain B, Crystal Structure Of Human P450 3a4 In Complex With
Erythromycin
pdb|2V0M|A Chain A, Crystal Structure Of Human P450 3a4 In Complex With
Ketoconazole
pdb|2V0M|B Chain B, Crystal Structure Of Human P450 3a4 In Complex With
Ketoconazole
pdb|2V0M|C Chain C, Crystal Structure Of Human P450 3a4 In Complex With
Ketoconazole
pdb|2V0M|D Chain D, Crystal Structure Of Human P450 3a4 In Complex With
Ketoconazole
pdb|3NXU|A Chain A, Crystal Structure Of Human Cytochrome P4503a4 Bound To An
Inhibitor Ritonavir
pdb|3NXU|B Chain B, Crystal Structure Of Human Cytochrome P4503a4 Bound To An
Inhibitor Ritonavir
Length = 485
Score = 116 bits (291), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 119/483 (24%), Positives = 207/483 (42%), Gaps = 34/483 (7%)
Query: 57 YNEISAKLRGPVGWPIVGTLPCMGS-LAHRK---LASMAASLGANRLMALSFGPTRVIIS 112
Y S L +G P LP +G+ L++ K + M ++ G V+
Sbjct: 3 YGTHSHGLFKKLGIPGPTPLPFLGNILSYHKGFCMFDMECHKKYGKVWGFYDGQQPVLAI 62
Query: 113 SHPETAKEILSGPSFS----DRPIKESARLLMFERAIGFAPSGKYWRHLRRIAANHMFSP 168
+ P+ K +L +S RP + AI A + W+ LR + + S
Sbjct: 63 TDPDMIKTVLVKECYSVFTNRRPFGPVG---FMKSAISIA-EDEEWKRLRSLLSPTFTSG 118
Query: 169 RRISGLEILRQRLADEMLSKVNQQMENKGVVRVREVLQKGSLGNILESLFGGSVISLKKE 228
+ + I+ Q D ++ + ++ E V +++V S+ I + FG ++ SL
Sbjct: 119 KLKEMVPIIAQ-YGDVLVRNLRREAETGKPVTLKDVFGAYSMDVITSTSFGVNIDSLNNP 177
Query: 229 ELEAMVKEGYELIAQFNWEDYFPLNLLDF------YGVKRRCHKLAARVKTLIGQVVEER 282
+ + V+ +L+ +F++ D F L++ F V C V + + V+
Sbjct: 178 Q-DPFVENTKKLL-RFDFLDPFFLSITVFPFLIPILEVLNIC-VFPREVTNFLRKSVKRM 234
Query: 283 KKNSGEFNNGGN-DFLSALLSLPKEDQ------LSDADTVAILWEMVFRGTDTVAILLEW 335
K++ E DFL ++ + LSD + VA +F G +T + +L +
Sbjct: 235 KESRLEDTQKHRVDFLQLMIDSQNSKETESHKALSDLELVAQSIIFIFAGYETTSSVLSF 294
Query: 336 IMARIVLHQDIQTKVQNEIDTWVGRDRHVEDSDISSLPYLQAIVKEVLRMHPPGPLLSWA 395
IM + H D+Q K+Q EID + + + YL +V E LR+ P +
Sbjct: 295 IMYELATHPDVQQKLQEEIDAVLPNKAPPTYDTVLQMEYLDMVVNETLRLFPIA--MRLE 352
Query: 396 RLAVHDVHVDKVFVPAGTTAMVNMWAITHDPTIWKNPWTFKPERFIEEDVPILGSDLRLA 455
R+ DV ++ +F+P G M+ +A+ DP W P F PERF +++ + +
Sbjct: 353 RVCKKDVEINGMFIPKGVVVMIPSYALHRDPKYWTEPEKFLPERFSKKNKDNIDPYI-YT 411
Query: 456 PFGSGRRVCPGKALGLATVHLWLARLLHRFRWLPAEPVDLSETLKLS--LEMKKPLTCRV 513
PFGSG R C G L + L L R+L F + P + + L L L+ +KP+ +V
Sbjct: 412 PFGSGPRNCIGMRFALMNMKLALIRVLQNFSFKPCKETQIPLKLSLGGLLQPEKPVVLKV 471
Query: 514 VPR 516
R
Sbjct: 472 ESR 474
>pdb|1TQN|A Chain A, Crystal Structure Of Human Microsomal P450 3a4
Length = 486
Score = 116 bits (290), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 119/483 (24%), Positives = 207/483 (42%), Gaps = 34/483 (7%)
Query: 57 YNEISAKLRGPVGWPIVGTLPCMGS-LAHRK---LASMAASLGANRLMALSFGPTRVIIS 112
Y S L +G P LP +G+ L++ K + M ++ G V+
Sbjct: 4 YGTHSHGLFKKLGIPGPTPLPFLGNILSYHKGFCMFDMECHKKYGKVWGFYDGQQPVLAI 63
Query: 113 SHPETAKEILSGPSFS----DRPIKESARLLMFERAIGFAPSGKYWRHLRRIAANHMFSP 168
+ P+ K +L +S RP + AI A + W+ LR + + S
Sbjct: 64 TDPDMIKTVLVKECYSVFTNRRPFGPVG---FMKSAISIA-EDEEWKRLRSLLSPTFTSG 119
Query: 169 RRISGLEILRQRLADEMLSKVNQQMENKGVVRVREVLQKGSLGNILESLFGGSVISLKKE 228
+ + I+ Q D ++ + ++ E V +++V S+ I + FG ++ SL
Sbjct: 120 KLKEMVPIIAQ-YGDVLVRNLRREAETGKPVTLKDVFGAYSMDVITSTSFGVNIDSLNNP 178
Query: 229 ELEAMVKEGYELIAQFNWEDYFPLNLLDF------YGVKRRCHKLAARVKTLIGQVVEER 282
+ + V+ +L+ +F++ D F L++ F V C V + + V+
Sbjct: 179 Q-DPFVENTKKLL-RFDFLDPFFLSITVFPFLIPILEVLNIC-VFPREVTNFLRKSVKRM 235
Query: 283 KKNSGEFNNGGN-DFLSALLSLPKEDQ------LSDADTVAILWEMVFRGTDTVAILLEW 335
K++ E DFL ++ + LSD + VA +F G +T + +L +
Sbjct: 236 KESRLEDTQKHRVDFLQLMIDSQNSKETESHKALSDLELVAQSIIFIFAGYETTSSVLSF 295
Query: 336 IMARIVLHQDIQTKVQNEIDTWVGRDRHVEDSDISSLPYLQAIVKEVLRMHPPGPLLSWA 395
IM + H D+Q K+Q EID + + + YL +V E LR+ P +
Sbjct: 296 IMYELATHPDVQQKLQEEIDAVLPNKAPPTYDTVLQMEYLDMVVNETLRLFPIA--MRLE 353
Query: 396 RLAVHDVHVDKVFVPAGTTAMVNMWAITHDPTIWKNPWTFKPERFIEEDVPILGSDLRLA 455
R+ DV ++ +F+P G M+ +A+ DP W P F PERF +++ + +
Sbjct: 354 RVCKKDVEINGMFIPKGVVVMIPSYALHRDPKYWTEPEKFLPERFSKKNKDNIDPYI-YT 412
Query: 456 PFGSGRRVCPGKALGLATVHLWLARLLHRFRWLPAEPVDLSETLKLS--LEMKKPLTCRV 513
PFGSG R C G L + L L R+L F + P + + L L L+ +KP+ +V
Sbjct: 413 PFGSGPRNCIGMRFALMNMKLALIRVLQNFSFKPCKETQIPLKLSLGGLLQPEKPVVLKV 472
Query: 514 VPR 516
R
Sbjct: 473 ESR 475
>pdb|3UA1|A Chain A, Crystal Structure Of The Cytochrome
P4503a4-Bromoergocryptine Complex
pdb|3TJS|A Chain A, Crystal Structure Of The Complex Between Human Cytochrome
P450 3a4 And Desthiazolylmethyloxycarbonyl Ritonavir
Length = 487
Score = 116 bits (290), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 119/483 (24%), Positives = 207/483 (42%), Gaps = 34/483 (7%)
Query: 57 YNEISAKLRGPVGWPIVGTLPCMGS-LAHRK---LASMAASLGANRLMALSFGPTRVIIS 112
Y S L +G P LP +G+ L++ K + M ++ G V+
Sbjct: 5 YGTHSHGLFKKLGIPGPTPLPFLGNILSYHKGFCMFDMECHKKYGKVWGFYDGQQPVLAI 64
Query: 113 SHPETAKEILSGPSFS----DRPIKESARLLMFERAIGFAPSGKYWRHLRRIAANHMFSP 168
+ P+ K +L +S RP + AI A + W+ LR + + S
Sbjct: 65 TDPDMIKTVLVKECYSVFTNRRPFGPVG---FMKSAISIA-EDEEWKRLRSLLSPTFTSG 120
Query: 169 RRISGLEILRQRLADEMLSKVNQQMENKGVVRVREVLQKGSLGNILESLFGGSVISLKKE 228
+ + I+ Q D ++ + ++ E V +++V S+ I + FG ++ SL
Sbjct: 121 KLKEMVPIIAQ-YGDVLVRNLRREAETGKPVTLKDVFGAYSMDVITSTSFGVNIDSLNNP 179
Query: 229 ELEAMVKEGYELIAQFNWEDYFPLNLLDF------YGVKRRCHKLAARVKTLIGQVVEER 282
+ + V+ +L+ +F++ D F L++ F V C V + + V+
Sbjct: 180 Q-DPFVENTKKLL-RFDFLDPFFLSITVFPFLIPILEVLNIC-VFPREVTNFLRKSVKRM 236
Query: 283 KKNSGEFNNGGN-DFLSALLSLPKEDQ------LSDADTVAILWEMVFRGTDTVAILLEW 335
K++ E DFL ++ + LSD + VA +F G +T + +L +
Sbjct: 237 KESRLEDTQKHRVDFLQLMIDSQNSKETESHKALSDLELVAQSIIFIFAGYETTSSVLSF 296
Query: 336 IMARIVLHQDIQTKVQNEIDTWVGRDRHVEDSDISSLPYLQAIVKEVLRMHPPGPLLSWA 395
IM + H D+Q K+Q EID + + + YL +V E LR+ P +
Sbjct: 297 IMYELATHPDVQQKLQEEIDAVLPNKAPPTYDTVLQMEYLDMVVNETLRLFPIA--MRLE 354
Query: 396 RLAVHDVHVDKVFVPAGTTAMVNMWAITHDPTIWKNPWTFKPERFIEEDVPILGSDLRLA 455
R+ DV ++ +F+P G M+ +A+ DP W P F PERF +++ + +
Sbjct: 355 RVCKKDVEINGMFIPKGVVVMIPSYALHRDPKYWTEPEKFLPERFSKKNKDNIDPYI-YT 413
Query: 456 PFGSGRRVCPGKALGLATVHLWLARLLHRFRWLPAEPVDLSETLKLS--LEMKKPLTCRV 513
PFGSG R C G L + L L R+L F + P + + L L L+ +KP+ +V
Sbjct: 414 PFGSGPRNCIGMRFALMNMKLALIRVLQNFSFKPCKETQIPLKLSLGGLLQPEKPVVLKV 473
Query: 514 VPR 516
R
Sbjct: 474 ESR 476
>pdb|1OG2|A Chain A, Structure Of Human Cytochrome P450 Cyp2c9
pdb|1OG2|B Chain B, Structure Of Human Cytochrome P450 Cyp2c9
pdb|1OG5|A Chain A, Structure Of Human Cytochrome P450 Cyp2c9
pdb|1OG5|B Chain B, Structure Of Human Cytochrome P450 Cyp2c9
Length = 475
Score = 111 bits (278), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 112/443 (25%), Positives = 195/443 (44%), Gaps = 39/443 (8%)
Query: 66 GPVGWPIVGTLPCMG-SLAHRKLASMAASLGANRLMALSFGPTRVIISSHPETAKEILS- 123
GP P++G + +G + L +++ G + L FG +++ E KE L
Sbjct: 13 GPTPLPVIGNILQIGIKDISKSLTNLSKVYGP--VFTLYFGLKPIVVLHGYEAVKEALID 70
Query: 124 -GPSFSDR---PIKESARLLMFERAIGFAPS-GKYWRHLRRIAANHMFSPRRIS-GLEIL 177
G FS R P+ E A R G S GK W+ +RR + + + R G +
Sbjct: 71 LGEEFSGRGIFPLAERAN-----RGFGIVFSNGKKWKEIRRFS---LMTLRNFGMGKRSI 122
Query: 178 RQRLADEMLSKVNQQMENKGVVRVREVLQKGSLGNILESLFGGSVISLKKEE---LEAMV 234
R+ +E V + + K + + N++ S+ K ++ L +
Sbjct: 123 EDRVQEEARCLVEELRKTKASPCDPTFILGCAPCNVICSIIFHKRFDYKDQQFLNLMEKL 182
Query: 235 KEGYELIAQ--FNWEDYFPLNLLDFY-GVKRRCHKLAARVKTLIGQVVEERKKNSGEFNN 291
E E+++ + FP LLD++ G + K A +K+ I + V+E ++ S + NN
Sbjct: 183 NENIEILSSPWIQVYNNFPA-LLDYFPGTHNKLLKNVAFMKSYILEKVKEHQE-SMDMNN 240
Query: 292 GGNDFLSALL--------SLPKEDQLSDADTVAILWEMVFRGTDTVAILLEWIMARIVLH 343
DF+ L + P E + + A+ ++ GT+T + L + + ++ H
Sbjct: 241 P-QDFIDCFLMKMEKEKHNQPSEFTIESLENTAV--DLFGAGTETTSTTLRYALLLLLKH 297
Query: 344 QDIQTKVQNEIDTWVGRDRHVEDSDISSLPYLQAIVKEVLRMHPPGPLLSWARLAVHDVH 403
++ KVQ EI+ +GR+R D S +PY A+V EV R P S D+
Sbjct: 298 PEVTAKVQEEIERVIGRNRSPCMQDRSHMPYTDAVVHEVQRYIDLLP-TSLPHAVTCDIK 356
Query: 404 VDKVFVPAGTTAMVNMWAITHDPTIWKNPWTFKPERFIEEDVPILGSDLRLAPFGSGRRV 463
+P GTT ++++ ++ HD + NP F P F++E S PF +G+R+
Sbjct: 357 FRNYLIPKGTTILISLTSVLHDNKEFPNPEMFDPHHFLDEGGNFKKSKY-FMPFSAGKRI 415
Query: 464 CPGKALGLATVHLWLARLLHRFR 486
C G+AL + L+L +L F
Sbjct: 416 CVGEALAGMELFLFLTSILQNFN 438
>pdb|3CZH|A Chain A, Crystal Structure Of Cyp2r1 In Complex With Vitamin D2
pdb|3CZH|B Chain B, Crystal Structure Of Cyp2r1 In Complex With Vitamin D2
Length = 481
Score = 109 bits (272), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 119/467 (25%), Positives = 198/467 (42%), Gaps = 49/467 (10%)
Query: 73 VGTLPCMGSLAHRKLASMAASLGANRLMALSFGPTRVIISSHPETAKEILSGPS--FSDR 130
+ +L L H + + G + +L G ++ + + KE L S F+DR
Sbjct: 26 IYSLAASSELPHVYMRKQSQVYG--EIFSLDLGGISTVVLNGYDVVKECLVHQSEIFADR 83
Query: 131 PIKESARLLMFERAIGFAPSGKY---WRHLRRIAANHMFSPRRIS-GLEILRQRLADEML 186
P L M +G + +Y W RR+A N S R G + ++ +E
Sbjct: 84 P---CLPLFMKMTKMGGLLNSRYGRGWVDHRRLAVN---SFRYFGYGQKSFESKILEET- 136
Query: 187 SKVNQQMEN-KGVVRVREVLQKGSLGNILESLFGGSVISLKKEELEAMVK---EGYELIA 242
N +E KG + L ++ NI + G + + + + M++ E EL A
Sbjct: 137 KFFNDAIETYKGRPFDFKQLITNAVSNITNLIIFGERFTYEDTDFQHMIELFSENVELAA 196
Query: 243 QFNWEDY--FP-LNLLDFYGVKRRCHKLAARVKTLIGQVVEERKKNS------------- 286
+ Y FP + +L F G ++ + AA V + +++E+ N
Sbjct: 197 SASVFLYNAFPWIGILPF-GKHQQLFRNAAVVYDFLSRLIEKASVNRKPQLPQHFVDAYL 255
Query: 287 GEFNNGGNDFLSALLSLPKEDQLSDADTVAILWEMVFRGTDTVAILLEWIMARIVLHQDI 346
E + G ND S + + + E++ GT+T +L W + + L+ +I
Sbjct: 256 DEMDQGKND---------PSSTFSKENLIFSVGELIIAGTETTTNVLRWAILFMALYPNI 306
Query: 347 QTKVQNEIDTWVGRDRHVEDSDISSLPYLQAIVKEVLRMHPPGPLLSWARLAVHDVHVDK 406
Q +VQ EID +G + D +PY +A++ EVLR PL + + D V
Sbjct: 307 QGQVQKEIDLIMGPNGKPSWDDKCKMPYTEAVLHEVLRFCNIVPLGIFHATS-EDAVVRG 365
Query: 407 VFVPAGTTAMVNMWAITHDPTIWKNPWTFKPERFIEEDVPILGSDLRLAPFGSGRRVCPG 466
+P GTT + N++++ D W++P F PERF++ L PF GRR C G
Sbjct: 366 YSIPKGTTVITNLYSVHFDEKYWRDPEVFHPERFLDSS-GYFAKKEALVPFSLGRRHCLG 424
Query: 467 KALGLATVHLWLARLLHRFRW-LPAEPV-DLSETLKLSLEMKKPLTC 511
+ L + L+ LL RF P E V DL L ++L+ + L C
Sbjct: 425 EHLARMEMFLFFTALLQRFHLHFPHELVPDLKPRLGMTLQPQPYLIC 471
>pdb|3C6G|A Chain A, Crystal Structure Of Cyp2r1 In Complex With Vitamin D3
pdb|3C6G|B Chain B, Crystal Structure Of Cyp2r1 In Complex With Vitamin D3
pdb|3DL9|A Chain A, Crystal Structure Of Cyp2r1 In Complex With
1-Alpha-Hydroxy- Vitamin D2
pdb|3DL9|B Chain B, Crystal Structure Of Cyp2r1 In Complex With
1-Alpha-Hydroxy- Vitamin D2
Length = 479
Score = 109 bits (272), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 119/467 (25%), Positives = 198/467 (42%), Gaps = 49/467 (10%)
Query: 73 VGTLPCMGSLAHRKLASMAASLGANRLMALSFGPTRVIISSHPETAKEILSGPS--FSDR 130
+ +L L H + + G + +L G ++ + + KE L S F+DR
Sbjct: 26 IYSLAASSELPHVYMRKQSQVYG--EIFSLDLGGISTVVLNGYDVVKECLVHQSEIFADR 83
Query: 131 PIKESARLLMFERAIGFAPSGKY---WRHLRRIAANHMFSPRRIS-GLEILRQRLADEML 186
P L M +G + +Y W RR+A N S R G + ++ +E
Sbjct: 84 P---CLPLFMKMTKMGGLLNSRYGRGWVDHRRLAVN---SFRYFGYGQKSFESKILEET- 136
Query: 187 SKVNQQMEN-KGVVRVREVLQKGSLGNILESLFGGSVISLKKEELEAMVK---EGYELIA 242
N +E KG + L ++ NI + G + + + + M++ E EL A
Sbjct: 137 KFFNDAIETYKGRPFDFKQLITNAVSNITNLIIFGERFTYEDTDFQHMIELFSENVELAA 196
Query: 243 QFNWEDY--FP-LNLLDFYGVKRRCHKLAARVKTLIGQVVEERKKNS------------- 286
+ Y FP + +L F G ++ + AA V + +++E+ N
Sbjct: 197 SASVFLYNAFPWIGILPF-GKHQQLFRNAAVVYDFLSRLIEKASVNRKPQLPQHFVDAYL 255
Query: 287 GEFNNGGNDFLSALLSLPKEDQLSDADTVAILWEMVFRGTDTVAILLEWIMARIVLHQDI 346
E + G ND S + + + E++ GT+T +L W + + L+ +I
Sbjct: 256 DEMDQGKND---------PSSTFSKENLIFSVGELIIAGTETTTNVLRWAILFMALYPNI 306
Query: 347 QTKVQNEIDTWVGRDRHVEDSDISSLPYLQAIVKEVLRMHPPGPLLSWARLAVHDVHVDK 406
Q +VQ EID +G + D +PY +A++ EVLR PL + + D V
Sbjct: 307 QGQVQKEIDLIMGPNGKPSWDDKCKMPYTEAVLHEVLRFCNIVPLGIFHATS-EDAVVRG 365
Query: 407 VFVPAGTTAMVNMWAITHDPTIWKNPWTFKPERFIEEDVPILGSDLRLAPFGSGRRVCPG 466
+P GTT + N++++ D W++P F PERF++ L PF GRR C G
Sbjct: 366 YSIPKGTTVITNLYSVHFDEKYWRDPEVFHPERFLDSS-GYFAKKEALVPFSLGRRHCLG 424
Query: 467 KALGLATVHLWLARLLHRFRW-LPAEPV-DLSETLKLSLEMKKPLTC 511
+ L + L+ LL RF P E V DL L ++L+ + L C
Sbjct: 425 EHLARMEMFLFFTALLQRFHLHFPHELVPDLKPRLGMTLQPQPYLIC 471
>pdb|1DT6|A Chain A, Structure Of Mammalian Cytochrome P450 2c5
pdb|1N6B|A Chain A, Microsomal Cytochrome P450 2c5/3lvdh Complex With A
Dimethyl Derivative Of Sulfaphenazole
pdb|1NR6|A Chain A, Microsomal Cytochrome P450 2c53LVDH COMPLEX WITH
DICLOFENAC
Length = 473
Score = 108 bits (271), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 114/451 (25%), Positives = 196/451 (43%), Gaps = 33/451 (7%)
Query: 66 GPVGWPIVGT-LPCMGSLAHRKLASMAASLGANRLMALSFGPTRVIISSHPETAKEILS- 123
GP +PI+G L + L + G + L PT V++ + E KE L
Sbjct: 14 GPTPFPIIGNILQIDAKDISKSLTKFSECYGPVFTVYLGMKPT-VVLHGY-EAVKEALVD 71
Query: 124 -GPSFSDR---PIKESARLLMFERAIGFAPS-GKYWRHLRRIAANHMFSPRRIS-GLEIL 177
G F+ R PI E + +G A S K W+ +RR + + + R G +
Sbjct: 72 LGEEFAGRGSVPILEKV-----SKGLGIAFSNAKTWKEMRRFS---LMTLRNFGMGKRSI 123
Query: 178 RQRLADEMLSKVNQQMENKGVVRVREVLQKGSLGNILESLFGGSVISLKKEELEAMVK-- 235
R+ +E V + + + + N++ S+ + K EE +++
Sbjct: 124 EDRIQEEARCLVEELRKTNASPCDPTFILGCAPCNVICSVIFHNRFDYKDEEFLKLMESL 183
Query: 236 -EGYELIAQ--FNWEDYFPLNLLDFY-GVKRRCHKLAARVKTLIGQVVEERKKNSGEFNN 291
E EL+ + FP LLD++ G+ + K A +K I + V+E +K N
Sbjct: 184 HENVELLGTPWLQVYNNFPA-LLDYFPGIHKTLLKNADYIKNFIMEKVKEHQKLLDV--N 240
Query: 292 GGNDFLSA-LLSLPKEDQL--SDADTVAILWEMVFRGTDTVAILLEWIMARIVLHQDIQT 348
DF+ L+ + +E+ L + V + ++ GT+T + L + + ++ H ++
Sbjct: 241 NPRDFIDCFLIKMEQENNLEFTLESLVIAVSDLFGAGTETTSTTLRYSLLLLLKHPEVAA 300
Query: 349 KVQNEIDTWVGRDRHVEDSDISSLPYLQAIVKEVLRMHPPGPLLSWARLAVHDVHVDKVF 408
+VQ EI+ +GR R D S +PY A++ E+ R P + DV F
Sbjct: 301 RVQEEIERVIGRHRSPCMQDRSRMPYTDAVIHEIQRFIDLLP-TNLPHAVTRDVRFRNYF 359
Query: 409 VPAGTTAMVNMWAITHDPTIWKNPWTFKPERFIEEDVPILGSDLRLAPFGSGRRVCPGKA 468
+P GT + ++ ++ HD + NP F P F++E SD PF +G+R+C G+
Sbjct: 360 IPKGTDIITSLTSVLHDEKAFPNPKVFDPGHFLDESGNFKKSDY-FMPFSAGKRMCVGEG 418
Query: 469 LGLATVHLWLARLLHRFRWLP-AEPVDLSET 498
L + L+L +L F+ EP DL T
Sbjct: 419 LARMELFLFLTSILQNFKLQSLVEPKDLDIT 449
>pdb|1R9O|A Chain A, Crystal Structure Of P4502c9 With Flurbiprofen Bound
Length = 477
Score = 107 bits (267), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 108/444 (24%), Positives = 195/444 (43%), Gaps = 41/444 (9%)
Query: 66 GPVGWPIVGTLPCMG-SLAHRKLASMAASLGANRLMALSFGPTRVIISSHPETAKEILS- 123
GP P++G + +G + L +++ G + L FG +++ E KE L
Sbjct: 15 GPTPLPVIGNILQIGIKDISKSLTNLSKVYGP--VFTLYFGLKPIVVLHGYEAVKEALID 72
Query: 124 -GPSFSDR---PIKESARLLMFERAIGFAPS-GKYWRHLRRIAANHMFSPRRIS-GLEIL 177
G FS R P+ E A R G S GK W+ +RR + + + R G +
Sbjct: 73 LGEEFSGRGIFPLAERAN-----RGFGIVFSNGKKWKEIRRFS---LMTLRNFGMGKRSI 124
Query: 178 RQRLADEMLSKVNQQMENKGVVRVREVLQKGSLGNILESLFGGSVISLKKEELEAMVKEG 237
R+ +E V + + K + + N++ S+ K ++ ++++
Sbjct: 125 EDRVQEEARCLVEELRKTKASPCDPTFILGCAPCNVICSIIFHKRFDYKDQQFLNLMEKL 184
Query: 238 YELIAQFN------WEDYFPLNLLDFY-GVKRRCHKLAARVKTLIGQVVEERKKNSGEFN 290
E I + ++ P+ +D++ G + K A +K+ I + V+E ++ S + N
Sbjct: 185 NENIKILSSPWIQICNNFSPI--IDYFPGTHNKLLKNVAFMKSYILEKVKEHQE-SMDMN 241
Query: 291 NGGNDFLSALL--------SLPKEDQLSDADTVAILWEMVFRGTDTVAILLEWIMARIVL 342
N DF+ L + P E + + A+ ++ GT+T + L + + ++
Sbjct: 242 NP-QDFIDCFLMKMEKEKHNQPSEFTIESLENTAV--DLFGAGTETTSTTLRYALLLLLK 298
Query: 343 HQDIQTKVQNEIDTWVGRDRHVEDSDISSLPYLQAIVKEVLRMHPPGPLLSWARLAVHDV 402
H ++ KVQ EI+ +GR+R D S +PY A+V EV R P S D+
Sbjct: 299 HPEVTAKVQEEIERVIGRNRSPCMQDRSHMPYTDAVVHEVQRYIDLLP-TSLPHAVTCDI 357
Query: 403 HVDKVFVPAGTTAMVNMWAITHDPTIWKNPWTFKPERFIEEDVPILGSDLRLAPFGSGRR 462
+P GTT ++++ ++ HD + NP F P F++E S PF +G+R
Sbjct: 358 KFRNYLIPKGTTILISLTSVLHDNKEFPNPEMFDPHHFLDEGGNFKKSKY-FMPFSAGKR 416
Query: 463 VCPGKALGLATVHLWLARLLHRFR 486
+C G+AL + L+L +L F
Sbjct: 417 ICVGEALAGMELFLFLTSILQNFN 440
>pdb|2P85|A Chain A, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|2P85|B Chain B, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|2P85|C Chain C, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|2P85|D Chain D, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|2P85|E Chain E, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|2P85|F Chain F, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|3T3S|A Chain A, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|B Chain B, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|C Chain C, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|D Chain D, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|E Chain E, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|F Chain F, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|G Chain G, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|H Chain H, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|4EJG|A Chain A, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|B Chain B, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|C Chain C, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|D Chain D, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|E Chain E, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|F Chain F, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|G Chain G, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|H Chain H, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJH|A Chain A, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|B Chain B, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|C Chain C, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|D Chain D, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|E Chain E, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|F Chain F, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|G Chain G, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|H Chain H, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJI|A Chain A, Human Cytochrome P450 2a13 In Complex With Two Molecules
Of 4- (Methylnitrosamino)-1-(3-Puridyl)-1-Butanone
Length = 476
Score = 105 bits (263), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 96/450 (21%), Positives = 187/450 (41%), Gaps = 32/450 (7%)
Query: 66 GPVGWPIVGT-LPCMGSLAHRKLASMAASLGANRLMALSFGPTRVIISSHPETAKEIL-- 122
GP P +G L + L ++ G + + GP RV++ + KE L
Sbjct: 14 GPTPLPFIGNYLQLNTEQMYNSLMKISERYGP--VFTIHLGPRRVVVLCGHDAVKEALVD 71
Query: 123 SGPSFSDRPIKESARLLMFERAIGFAPSGKYWRHLRRIAANHMFSPRRISGLEI----LR 178
FS R + + L + F+ +G+ + LRR FS + G + +
Sbjct: 72 QAEEFSGRGEQATFDWLFKGYGVAFS-NGERAKQLRR------FSIATLRGFGVGKRGIE 124
Query: 179 QRLADEMLSKVNQQMENKGVVRVREVLQKGSLGNILESLFGGSVISLKKEELEAMVK--- 235
+R+ +E ++ G ++ N++ S+ G + +E ++++
Sbjct: 125 ERIQEEAGFLIDALRGTHGANIDPTFFLSRTVSNVISSIVFGDRFDYEDKEFLSLLRMML 184
Query: 236 EGYELIAQFNWEDY--FPLNLLDFYGVKRRCHKLAARVKTLIGQVVEERKKNSGEFNNGG 293
++ A + Y F + G +++ K ++ I + VE ++ N
Sbjct: 185 GSFQFTATSTGQLYEMFSSVMKHLPGPQQQAFKELQGLEDFIAKKVEHNQRTLDP--NSP 242
Query: 294 NDFLSALLSLPKEDQLSD------ADTVAILWEMVFRGTDTVAILLEWIMARIVLHQDIQ 347
DF+ + L +E++ + + V + F GT+TV+ L + ++ H +++
Sbjct: 243 RDFIDSFLIRMQEEEKNPNTEFYLKNLVMTTLNLFFAGTETVSTTLRYGFLLLMKHPEVE 302
Query: 348 TKVQNEIDTWVGRDRHVEDSDISSLPYLQAIVKEVLRMHPPGPLLSWARLAVHDVHVDKV 407
KV EID +G++R + D + +PY +A++ E+ R P + A D
Sbjct: 303 AKVHEEIDRVIGKNRQPKFEDRAKMPYTEAVIHEIQRFGDMLP-MGLAHRVNKDTKFRDF 361
Query: 408 FVPAGTTAMVNMWAITHDPTIWKNPWTFKPERFIEEDVPILGSDLRLAPFGSGRRVCPGK 467
F+P GT + ++ DP + NP F P+ F+++ SD PF G+R C G+
Sbjct: 362 FLPKGTEVFPMLGSVLRDPRFFSNPRDFNPQHFLDKKGQFKKSDA-FVPFSIGKRYCFGE 420
Query: 468 ALGLATVHLWLARLLHRFRWL-PAEPVDLS 496
L + L+ ++ FR+ P P D+
Sbjct: 421 GLARMELFLFFTTIMQNFRFKSPQSPKDID 450
>pdb|3EBS|A Chain A, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
With Phenacetin
pdb|3EBS|B Chain B, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
With Phenacetin
pdb|3EBS|C Chain C, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
With Phenacetin
pdb|3EBS|D Chain D, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
With Phenacetin
pdb|3T3Q|A Chain A, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
WITH Pilocarpine
pdb|3T3Q|B Chain B, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
WITH Pilocarpine
pdb|3T3Q|C Chain C, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
WITH Pilocarpine
pdb|3T3Q|D Chain D, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
WITH Pilocarpine
Length = 476
Score = 105 bits (261), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 96/451 (21%), Positives = 189/451 (41%), Gaps = 34/451 (7%)
Query: 66 GPVGWPIVGT-LPCMGSLAHRKLASMAASLGANRLMALSFGPTRVIISSHPETAKEIL-- 122
GP P +G L + L ++ G + + GP RV++ + +E L
Sbjct: 14 GPTPLPFIGNYLQLNTEQMYNSLMKISERYGP--VFTIHLGPRRVVVLCGHDAVREALVD 71
Query: 123 SGPSFSDRPIKESARLLMFERAIGFAPSGKYWRHLRR--IAANHMFSPRRISGLEILRQR 180
FS R + + + + F+ +G+ + LRR IA F G + +R
Sbjct: 72 QAEEFSGRGEQATFDWVFKGYGVVFS-NGERAKQLRRFSIATLRDFG----VGKRGIEER 126
Query: 181 LADEMLSKVNQQMENKGVVRVREVLQKGSLGNILESLFGGSVISLKKEELEAMVKEGYEL 240
+ +E ++ G ++ N++ S+ G K +E ++++ +
Sbjct: 127 IQEEAGFLIDALRGTGGANIDPTFFLSRTVSNVISSIVFGDRFDYKDKEFLSLLRM---M 183
Query: 241 IAQFNWEDYFPLNLLDFY--------GVKRRCHKLAARVKTLIGQVVEERKKNSGEFNNG 292
+ F + L + + G +++ +L ++ I + VE ++ N
Sbjct: 184 LGSFQFTSTSTGQLYEMFSSVMKHLPGPQQQAFQLLQGLEDFIAKKVEHNQRTLDP--NS 241
Query: 293 GNDFLSALLSLPKEDQLSD------ADTVAILWEMVFRGTDTVAILLEWIMARIVLHQDI 346
DF+ + L +E++ + + V + F GT+TV+ L + ++ H ++
Sbjct: 242 PRDFIDSFLIRMQEEEKNPNTEFYLKNLVMTTLNLFFAGTETVSTTLRYGFLLLMKHPEV 301
Query: 347 QTKVQNEIDTWVGRDRHVEDSDISSLPYLQAIVKEVLRMHPPGPLLSWARLAVHDVHVDK 406
+ KV EID +G++R + D + +PY++A++ E+ R P + AR D
Sbjct: 302 EAKVHEEIDRVIGKNRQPKFEDRAKMPYMEAVIHEIQRFGDVIP-MGLARRVKKDTKFRD 360
Query: 407 VFVPAGTTAMVNMWAITHDPTIWKNPWTFKPERFIEEDVPILGSDLRLAPFGSGRRVCPG 466
F+P GT + ++ DP+ + NP F P+ F+ E SD PF G+R C G
Sbjct: 361 FFLPKGTEVYPMLGSVLRDPSFFSNPQDFNPQHFLNEKGQFKKSDA-FVPFSIGKRNCFG 419
Query: 467 KALGLATVHLWLARLLHRFRWLPAE-PVDLS 496
+ L + L+ ++ FR ++ P D+
Sbjct: 420 EGLARMELFLFFTTVMQNFRLKSSQSPKDID 450
>pdb|4GQS|A Chain A, Structure Of Human Microsomal Cytochrome P450 (cyp) 2c19
pdb|4GQS|B Chain B, Structure Of Human Microsomal Cytochrome P450 (cyp) 2c19
pdb|4GQS|C Chain C, Structure Of Human Microsomal Cytochrome P450 (cyp) 2c19
pdb|4GQS|D Chain D, Structure Of Human Microsomal Cytochrome P450 (cyp) 2c19
Length = 477
Score = 104 bits (260), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 113/453 (24%), Positives = 197/453 (43%), Gaps = 34/453 (7%)
Query: 66 GPVGWPIVGTLPCMG-SLAHRKLASMAASLGANRLMALSFGPTRVIISSHPETAKEILS- 123
GP P++G + + + L +++ G + L FG R+++ E KE L
Sbjct: 15 GPTPLPVIGNILQIDIKDVSKSLTNLSKIYGP--VFTLYFGLERMVVLHGYEVVKEALID 72
Query: 124 -GPSFSDR---PIKESARLLMFERAIGFAPS-GKYWRHLRRIAANHMFSPRRIS-GLEIL 177
G FS R P+ E A R G S GK W+ +RR + + + R G +
Sbjct: 73 LGEEFSGRGHFPLAERAN-----RGFGIVFSNGKRWKEIRRFS---LMTLRNFGMGKRSI 124
Query: 178 RQRLADEMLSKVNQQMENKGVVRVREVLQKGSLGNILESLFGGSVISLKKEELEAMVKEG 237
R+ +E V + + K + + N++ S+ K ++ ++++
Sbjct: 125 EDRVQEEARCLVEELRKTKASPCDPTFILGCAPCNVICSIIFQKRFDYKDQQFLNLMEKL 184
Query: 238 YELIAQFNWE-----DYFPLNLLDFYGVKRRCHKLAARVKTLIGQVVEERKKNSGEFNNG 292
E I + + FP + F G + K A +++ I + V+E ++ S + NN
Sbjct: 185 NENIRIVSTPWIQICNNFPTIIDYFPGTHNKLLKNLAFMESDILEKVKEHQE-SMDINNP 243
Query: 293 GNDFLSA-LLSLPKEDQ-----LSDADTVAILWEMVFRGTDTVAILLEWIMARIVLHQDI 346
DF+ L+ + KE Q + + V +++ GT+T + L + + ++ H ++
Sbjct: 244 -RDFIDCFLIKMEKEKQNQQSEFTIENLVITAADLLGAGTETTSTTLRYALLLLLKHPEV 302
Query: 347 QTKVQNEIDTWVGRDRHVEDSDISSLPYLQAIVKEVLRMHPPGPLLSWARLAVHDVHVDK 406
KVQ EI+ VGR+R D +PY A+V EV R P S DV
Sbjct: 303 TAKVQEEIERVVGRNRSPCMQDRGHMPYTDAVVHEVQRYIDLIP-TSLPHAVTCDVKFRN 361
Query: 407 VFVPAGTTAMVNMWAITHDPTIWKNPWTFKPERFIEEDVPILGSDLRLAPFGSGRRVCPG 466
+P GTT + ++ ++ HD + NP F P F++E S+ PF +G+R+C G
Sbjct: 362 YLIPKGTTILTSLTSVLHDNKEFPNPEMFDPRHFLDEGGNFKKSNY-FMPFSAGKRICVG 420
Query: 467 KALGLATVHLWLARLLHRFRWLP-AEPVDLSET 498
+ L + L+L +L F +P DL T
Sbjct: 421 EGLARMELFLFLTFILQNFNLKSLIDPKDLDTT 453
>pdb|1PQ2|A Chain A, Crystal Structure Of Human Drug Metabolizing Cytochrome
P450 2c8
pdb|1PQ2|B Chain B, Crystal Structure Of Human Drug Metabolizing Cytochrome
P450 2c8
pdb|2NNH|A Chain A, Cyp2c8dh Complexed With 2 Molecules Of 9-Cis Retinoic Acid
pdb|2NNH|B Chain B, Cyp2c8dh Complexed With 2 Molecules Of 9-Cis Retinoic Acid
pdb|2NNI|A Chain A, Cyp2c8dh Complexed With Montelukast
pdb|2NNJ|A Chain A, Cyp2c8dh Complexed With Felodipine
pdb|2VN0|A Chain A, Cyp2c8dh Complexed With Troglitazone
Length = 476
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 108/439 (24%), Positives = 185/439 (42%), Gaps = 33/439 (7%)
Query: 66 GPVGWPIVGTLPCMG-SLAHRKLASMAASLGANRLMALSFGPTRVIISSHPETAKEIL-- 122
GP PI+G + + + + + G + + FG +++ E KE L
Sbjct: 14 GPTPLPIIGNMLQIDVKDICKSFTNFSKVYGP--VFTVYFGMNPIVVFHGYEAVKEALID 71
Query: 123 SGPSFSDR---PIKESARLLMFERAIGFAPS-GKYWRHLRRIAANHMFSPRRIS-GLEIL 177
+G FS R PI S R+ + +G S GK W+ +RR + + R G +
Sbjct: 72 NGEEFSGRGNSPI--SQRIT---KGLGIISSNGKRWKEIRRFSLTTL---RNFGMGKRSI 123
Query: 178 RQRLADEMLSKVNQQMENKGVVRVREVLQKGSLGNILESLFGGSVISLKKEELEAMVKEG 237
R+ +E V + + K + + N++ S+ K + ++K
Sbjct: 124 EDRVQEEAHCLVEELRKTKASPCDPTFILGCAPCNVICSVVFQKRFDYKDQNFLTLMKRF 183
Query: 238 YELIAQFNWE-----DYFPLNLLDFYGVKRRCHKLAARVKTLIGQVVEERKKNSGEFNNG 292
E N + FPL + F G + K A ++ I + V+E + S + NN
Sbjct: 184 NENFRILNSPWIQVCNNFPLLIDCFPGTHNKVLKNVALTRSYIREKVKEHQA-SLDVNNP 242
Query: 293 GNDFLSALL---SLPKEDQLSD---ADTVAILWEMVFRGTDTVAILLEWIMARIVLHQDI 346
DF+ L K++Q S+ + V + ++ GT+T + L + + ++ H ++
Sbjct: 243 -RDFIDCFLIKMEQEKDNQKSEFNIENLVGTVADLFVAGTETTSTTLRYGLLLLLKHPEV 301
Query: 347 QTKVQNEIDTWVGRDRHVEDSDISSLPYLQAIVKEVLRMHPPGPLLSWARLAVHDVHVDK 406
KVQ EID +GR R D S +PY A+V E+ R P D
Sbjct: 302 TAKVQEEIDHVIGRHRSPCMQDRSHMPYTDAVVHEIQRYSDLVP-TGVPHAVTTDTKFRN 360
Query: 407 VFVPAGTTAMVNMWAITHDPTIWKNPWTFKPERFIEEDVPILGSDLRLAPFGSGRRVCPG 466
+P GTT M + ++ HD + NP F P F++++ SD PF +G+R+C G
Sbjct: 361 YLIPKGTTIMALLTSVLHDDKEFPNPNIFDPGHFLDKNGNFKKSDY-FMPFSAGKRICAG 419
Query: 467 KALGLATVHLWLARLLHRF 485
+ L + L+L +L F
Sbjct: 420 EGLARMELFLFLTTILQNF 438
>pdb|2PG5|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 N297q
pdb|2PG5|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 N297q
pdb|2PG5|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 N297q
pdb|2PG5|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 N297q
Length = 476
Score = 103 bits (257), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 96/451 (21%), Positives = 190/451 (42%), Gaps = 34/451 (7%)
Query: 66 GPVGWPIVGT-LPCMGSLAHRKLASMAASLGANRLMALSFGPTRVIISSHPETAKEIL-- 122
GP P +G L + L ++ G + + GP RV++ + +E L
Sbjct: 14 GPTPLPFIGNYLQLNTEQMYNSLMKISERYGP--VFTIHLGPRRVVVLCGHDAVREALVD 71
Query: 123 SGPSFSDRPIKESARLLMFERAIGFAPSGKYWRHLRR--IAANHMFSPRRISGLEILRQR 180
FS R + + + + F+ +G+ + LRR IA F G + +R
Sbjct: 72 QAEEFSGRGEQATFDWVFKGYGVVFS-NGERAKQLRRFSIATLRDFG----VGKRGIEER 126
Query: 181 LADEMLSKVNQQMENKGVVRVREVLQKGSLGNILESLFGGSVISLKKEELEAMVKEGYEL 240
+ +E ++ G ++ N++ S+ G K +E ++++ +
Sbjct: 127 IQEEAGFLIDALRGTGGANIDPTFFLSRTVSNVISSIVFGDRFDYKDKEFLSLLRM---M 183
Query: 241 IAQFNWEDYFPLNLLDFY--------GVKRRCHKLAARVKTLIGQVVEERKKNSGEFNNG 292
+ F + L + + G +++ +L ++ I + VE ++ N
Sbjct: 184 LGIFQFTSTSTGQLYEMFSSVMKHLPGPQQQAFQLLQGLEDFIAKKVEHNQRTLDP--NS 241
Query: 293 GNDFLSALLSLPKEDQLSD------ADTVAILWEMVFRGTDTVAILLEWIMARIVLHQDI 346
DF+ + L +E++ + + V ++ GT+TV+ L + ++ H ++
Sbjct: 242 PRDFIDSFLIRMQEEEKNPNTEFYLKNLVMTTLQLFIGGTETVSTTLRYGFLLLMKHPEV 301
Query: 347 QTKVQNEIDTWVGRDRHVEDSDISSLPYLQAIVKEVLRMHPPGPLLSWARLAVHDVHVDK 406
+ KV EID +G++R + D + +PY++A++ E+ R P +S AR D
Sbjct: 302 EAKVHEEIDRVIGKNRQPKFEDRAKMPYMEAVIHEIQRFGDVIP-MSLARRVKKDTKFRD 360
Query: 407 VFVPAGTTAMVNMWAITHDPTIWKNPWTFKPERFIEEDVPILGSDLRLAPFGSGRRVCPG 466
F+P GT + ++ DP+ + NP F P+ F+ E SD PF G+R C G
Sbjct: 361 FFLPKGTEVYPMLGSVLRDPSFFSNPQDFNPQHFLNEKGQFKKSDA-FVPFSIGKRNCFG 419
Query: 467 KALGLATVHLWLARLLHRFRWLPAE-PVDLS 496
+ L + L+ ++ FR ++ P D+
Sbjct: 420 EGLARMELFLFFTTVMQNFRLKSSQSPKDID 450
>pdb|2F9Q|A Chain A, Crystal Structure Of Human Cytochrome P450 2d6
pdb|2F9Q|B Chain B, Crystal Structure Of Human Cytochrome P450 2d6
pdb|2F9Q|C Chain C, Crystal Structure Of Human Cytochrome P450 2d6
pdb|2F9Q|D Chain D, Crystal Structure Of Human Cytochrome P450 2d6
Length = 479
Score = 103 bits (257), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 92/383 (24%), Positives = 162/383 (42%), Gaps = 24/383 (6%)
Query: 121 ILSGPSFSDRPIKESARLLMF---ERAIGFAPSGKYWRHLRRIAANHMFSPRRIS-GLEI 176
+ G +DRP ++L F + + A G WR RR + + + R + G +
Sbjct: 70 VTHGEDTADRPPVPITQILGFGPRSQGVFLARYGPAWREQRRFSVSTL---RNLGLGKKS 126
Query: 177 LRQRLADEMLSKVNQQMENKGVVRVREVLQKGSLGNILESLFGGSVISLKKEELEAMVKE 236
L Q + +E + G L ++ N++ SL G ++
Sbjct: 127 LEQWVTEEAACLCAAFANHSGRPFRPNGLLDKAVSNVIASLTCGRRFEYDDPRFLRLLDL 186
Query: 237 GYELIAQFNWEDYFPLNLLDFYGVKRRCHKLAARV----KTLIGQVVEERKKNSGEFNNG 292
E + + E F +L+ V R LA +V K + Q+ E ++ ++
Sbjct: 187 AQEGLKE---ESGFLREVLNAVPVDRHIPALAGKVLRFQKAFLTQLDELLTEHRMTWDPA 243
Query: 293 G--NDFLSALLSLPK------EDQLSDADTVAILWEMVFRGTDTVAILLEWIMARIVLHQ 344
D A L+ + E +D + ++ ++ G T + L W + ++LH
Sbjct: 244 QPPRDLTEAFLAEMEKAKGNPESSFNDENLRIVVADLFSAGMVTTSTTLAWGLLLMILHP 303
Query: 345 DIQTKVQNEIDTWVGRDRHVEDSDISSLPYLQAIVKEVLRMHPPGPLLSWARLAVHDVHV 404
D+Q +VQ EID +G+ R E D + +PY A++ EV R P L + D+ V
Sbjct: 304 DVQRRVQQEIDDVIGQVRRPEMGDQAHMPYTTAVIHEVQRFGDIVP-LGMTHMTSRDIEV 362
Query: 405 DKVFVPAGTTAMVNMWAITHDPTIWKNPWTFKPERFIEEDVPILGSDLRLAPFGSGRRVC 464
+P GTT + N+ ++ D +W+ P+ F PE F++ + + L PF +GRR C
Sbjct: 363 QGFRIPKGTTLITNLSSVLKDEAVWEKPFRFHPEHFLDAQGHFVKPEAFL-PFSAGRRAC 421
Query: 465 PGKALGLATVHLWLARLLHRFRW 487
G+ L + L+ LL F +
Sbjct: 422 LGEPLARMELFLFFTSLLQHFSF 444
>pdb|2PG7|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 N297qI300V
pdb|2PG7|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 N297qI300V
pdb|2PG7|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 N297qI300V
pdb|2PG7|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 N297qI300V
Length = 476
Score = 103 bits (256), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 96/451 (21%), Positives = 190/451 (42%), Gaps = 34/451 (7%)
Query: 66 GPVGWPIVGT-LPCMGSLAHRKLASMAASLGANRLMALSFGPTRVIISSHPETAKEIL-- 122
GP P +G L + L ++ G + + GP RV++ + +E L
Sbjct: 14 GPTPLPFIGNYLQLNTEQMYNSLMKISERYGP--VFTIHLGPRRVVVLCGHDAVREALVD 71
Query: 123 SGPSFSDRPIKESARLLMFERAIGFAPSGKYWRHLRR--IAANHMFSPRRISGLEILRQR 180
FS R + + + + F+ +G+ + LRR IA F G + +R
Sbjct: 72 QAEEFSGRGEQATFDWVFKGYGVVFS-NGERAKQLRRFSIATLRDFG----VGKRGIEER 126
Query: 181 LADEMLSKVNQQMENKGVVRVREVLQKGSLGNILESLFGGSVISLKKEELEAMVKEGYEL 240
+ +E ++ G ++ N++ S+ G K +E ++++ +
Sbjct: 127 IQEEAGFLIDALRGTGGANIDPTFFLSRTVSNVISSIVFGDRFDYKDKEFLSLLRM---M 183
Query: 241 IAQFNWEDYFPLNLLDFY--------GVKRRCHKLAARVKTLIGQVVEERKKNSGEFNNG 292
+ F + L + + G +++ +L ++ I + VE ++ N
Sbjct: 184 LGIFQFTSTSTGQLYEMFSSVMKHLPGPQQQAFQLLQGLEDFIAKKVEHNQRTLDP--NS 241
Query: 293 GNDFLSALLSLPKEDQLSD------ADTVAILWEMVFRGTDTVAILLEWIMARIVLHQDI 346
DF+ + L +E++ + + V ++ GT+TV+ L + ++ H ++
Sbjct: 242 PRDFIDSFLIRMQEEEKNPNTEFYLKNLVMTTLQLFVGGTETVSTTLRYGFLLLMKHPEV 301
Query: 347 QTKVQNEIDTWVGRDRHVEDSDISSLPYLQAIVKEVLRMHPPGPLLSWARLAVHDVHVDK 406
+ KV EID +G++R + D + +PY++A++ E+ R P +S AR D
Sbjct: 302 EAKVHEEIDRVIGKNRQPKFEDRAKMPYMEAVIHEIQRFGDVIP-MSLARRVKKDTKFRD 360
Query: 407 VFVPAGTTAMVNMWAITHDPTIWKNPWTFKPERFIEEDVPILGSDLRLAPFGSGRRVCPG 466
F+P GT + ++ DP+ + NP F P+ F+ E SD PF G+R C G
Sbjct: 361 FFLPKGTEVYPMLGSVLRDPSFFSNPQDFNPQHFLNEKGQFKKSDA-FVPFSIGKRNCFG 419
Query: 467 KALGLATVHLWLARLLHRFRWLPAE-PVDLS 496
+ L + L+ ++ FR ++ P D+
Sbjct: 420 EGLARMELFLFFTTVMQNFRLKSSQSPKDID 450
>pdb|1Z10|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 With
Coumarin Bound
pdb|1Z10|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 With
Coumarin Bound
pdb|1Z10|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 With
Coumarin Bound
pdb|1Z10|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 With
Coumarin Bound
pdb|1Z11|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 With
Methoxsalen Bound
pdb|1Z11|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 With
Methoxsalen Bound
pdb|1Z11|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 With
Methoxsalen Bound
pdb|1Z11|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 With
Methoxsalen Bound
pdb|2FDU|A Chain A, Microsomal P450 2a6 With The Inhibitor N,N-Dimethyl(5-
(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDU|B Chain B, Microsomal P450 2a6 With The Inhibitor N,N-Dimethyl(5-
(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDU|C Chain C, Microsomal P450 2a6 With The Inhibitor N,N-Dimethyl(5-
(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDU|D Chain D, Microsomal P450 2a6 With The Inhibitor N,N-Dimethyl(5-
(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDV|A Chain A, Microsomal P450 2a6 With The Inhibitor
N-Methyl(5-(Pyridin- 3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDV|B Chain B, Microsomal P450 2a6 With The Inhibitor
N-Methyl(5-(Pyridin- 3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDV|C Chain C, Microsomal P450 2a6 With The Inhibitor
N-Methyl(5-(Pyridin- 3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDV|D Chain D, Microsomal P450 2a6 With The Inhibitor
N-Methyl(5-(Pyridin- 3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDW|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 With The
Inhibitor (5-(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDW|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 With The
Inhibitor (5-(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDW|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 With The
Inhibitor (5-(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDW|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 With The
Inhibitor (5-(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDY|A Chain A, Microsomal P450 2a6 With The Inhibitor Adrithiol Bound
pdb|2FDY|B Chain B, Microsomal P450 2a6 With The Inhibitor Adrithiol Bound
pdb|2FDY|C Chain C, Microsomal P450 2a6 With The Inhibitor Adrithiol Bound
pdb|2FDY|D Chain D, Microsomal P450 2a6 With The Inhibitor Adrithiol Bound
pdb|3T3R|A Chain A, Human Cytochrome P450 2a6 In Complex With Pilocarpine
pdb|3T3R|B Chain B, Human Cytochrome P450 2a6 In Complex With Pilocarpine
pdb|3T3R|C Chain C, Human Cytochrome P450 2a6 In Complex With Pilocarpine
pdb|3T3R|D Chain D, Human Cytochrome P450 2a6 In Complex With Pilocarpine
pdb|4EJJ|A Chain A, Human Cytochrome P450 2a6 In Complex With Nicotine
pdb|4EJJ|B Chain B, Human Cytochrome P450 2a6 In Complex With Nicotine
pdb|4EJJ|C Chain C, Human Cytochrome P450 2a6 In Complex With Nicotine
pdb|4EJJ|D Chain D, Human Cytochrome P450 2a6 In Complex With Nicotine
Length = 476
Score = 102 bits (255), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 98/452 (21%), Positives = 191/452 (42%), Gaps = 36/452 (7%)
Query: 66 GPVGWPIVGT-LPCMGSLAHRKLASMAASLGANRLMALSFGPTRVIISSHPETAKEIL-- 122
GP P +G L + L ++ G + + GP RV++ + +E L
Sbjct: 14 GPTPLPFIGNYLQLNTEQMYNSLMKISERYGP--VFTIHLGPRRVVVLCGHDAVREALVD 71
Query: 123 SGPSFSDRPIKESARLLMFERAIGFAPSGKYWRHLRR--IAANHMFSPRRISGLEILRQR 180
FS R + + + + F+ +G+ + LRR IA F G + +R
Sbjct: 72 QAEEFSGRGEQATFDWVFKGYGVVFS-NGERAKQLRRFSIATLRDFG----VGKRGIEER 126
Query: 181 LADEMLSKVNQQMENKGVVRVREVLQKGSLGNILESLFGGSVISLKKEELEAMVKEGYEL 240
+ +E ++ G ++ N++ S+ G K +E ++++ +
Sbjct: 127 IQEEAGFLIDALRGTGGANIDPTFFLSRTVSNVISSIVFGDRFDYKDKEFLSLLRM---M 183
Query: 241 IAQFNWEDYFPLNLLDFY--------GVKRRCHKLAARVKTLIGQVVEERKKNSGEFNNG 292
+ F + L + + G +++ +L ++ I + VE ++ N
Sbjct: 184 LGIFQFTSTSTGQLYEMFSSVMKHLPGPQQQAFQLLQGLEDFIAKKVEHNQRTLDP--NS 241
Query: 293 GNDFLSALLSLPKEDQLSDADTVAILWEMVFR-------GTDTVAILLEWIMARIVLHQD 345
DF+ + L +E++ + +T L +V GT+TV+ L + ++ H +
Sbjct: 242 PRDFIDSFLIRMQEEE-KNPNTEFYLKNLVMTTLNLFIGGTETVSTTLRYGFLLLMKHPE 300
Query: 346 IQTKVQNEIDTWVGRDRHVEDSDISSLPYLQAIVKEVLRMHPPGPLLSWARLAVHDVHVD 405
++ KV EID +G++R + D + +PY++A++ E+ R P +S AR D
Sbjct: 301 VEAKVHEEIDRVIGKNRQPKFEDRAKMPYMEAVIHEIQRFGDVIP-MSLARRVKKDTKFR 359
Query: 406 KVFVPAGTTAMVNMWAITHDPTIWKNPWTFKPERFIEEDVPILGSDLRLAPFGSGRRVCP 465
F+P GT + ++ DP+ + NP F P+ F+ E SD PF G+R C
Sbjct: 360 DFFLPKGTEVYPMLGSVLRDPSFFSNPQDFNPQHFLNEKGQFKKSDA-FVPFSIGKRNCF 418
Query: 466 GKALGLATVHLWLARLLHRFRWLPAE-PVDLS 496
G+ L + L+ ++ FR ++ P D+
Sbjct: 419 GEGLARMELFLFFTTVMQNFRLKSSQSPKDID 450
>pdb|2PG6|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 L240cN297Q
pdb|2PG6|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 L240cN297Q
pdb|2PG6|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 L240cN297Q
pdb|2PG6|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 L240cN297Q
Length = 476
Score = 102 bits (253), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 95/451 (21%), Positives = 189/451 (41%), Gaps = 34/451 (7%)
Query: 66 GPVGWPIVGT-LPCMGSLAHRKLASMAASLGANRLMALSFGPTRVIISSHPETAKEIL-- 122
GP P +G L + L ++ G + + GP RV++ + +E L
Sbjct: 14 GPTPLPFIGNYLQLNTEQMYNSLMKISERYGP--VFTIHLGPRRVVVLCGHDAVREALVD 71
Query: 123 SGPSFSDRPIKESARLLMFERAIGFAPSGKYWRHLRR--IAANHMFSPRRISGLEILRQR 180
FS R + + + + F+ +G+ + LRR IA F G + +R
Sbjct: 72 QAEEFSGRGEQATFDWVFKGYGVVFS-NGERAKQLRRFSIATLRDFG----VGKRGIEER 126
Query: 181 LADEMLSKVNQQMENKGVVRVREVLQKGSLGNILESLFGGSVISLKKEELEAMVKEGYEL 240
+ +E ++ G ++ N++ S+ G K +E ++++ +
Sbjct: 127 IQEEAGFLIDALRGTGGANIDPTFFLSRTVSNVISSIVFGDRFDYKDKEFLSLLRM---M 183
Query: 241 IAQFNWEDYFPLNLLDFY--------GVKRRCHKLAARVKTLIGQVVEERKKNSGEFNNG 292
+ F + L + + G +++ + ++ I + VE ++ N
Sbjct: 184 LGIFQFTSTSTGQLYEMFSSVMKHLPGPQQQAFQCLQGLEDFIAKKVEHNQRTLDP--NS 241
Query: 293 GNDFLSALLSLPKEDQLSD------ADTVAILWEMVFRGTDTVAILLEWIMARIVLHQDI 346
DF+ + L +E++ + + V ++ GT+TV+ L + ++ H ++
Sbjct: 242 PRDFIDSFLIRMQEEEKNPNTEFYLKNLVMTTLQLFIGGTETVSTTLRYGFLLLMKHPEV 301
Query: 347 QTKVQNEIDTWVGRDRHVEDSDISSLPYLQAIVKEVLRMHPPGPLLSWARLAVHDVHVDK 406
+ KV EID +G++R + D + +PY++A++ E+ R P +S AR D
Sbjct: 302 EAKVHEEIDRVIGKNRQPKFEDRAKMPYMEAVIHEIQRFGDVIP-MSLARRVKKDTKFRD 360
Query: 407 VFVPAGTTAMVNMWAITHDPTIWKNPWTFKPERFIEEDVPILGSDLRLAPFGSGRRVCPG 466
F+P GT + ++ DP+ + NP F P+ F+ E SD PF G+R C G
Sbjct: 361 FFLPKGTEVYPMLGSVLRDPSFFSNPQDFNPQHFLNEKGQFKKSDA-FVPFSIGKRNCFG 419
Query: 467 KALGLATVHLWLARLLHRFRWLPAE-PVDLS 496
+ L + L+ ++ FR ++ P D+
Sbjct: 420 EGLARMELFLFFTTVMQNFRLKSSQSPKDID 450
>pdb|3QM4|A Chain A, Human Cytochrome P450 (Cyp) 2d6 - Prinomastat Complex
pdb|3QM4|B Chain B, Human Cytochrome P450 (Cyp) 2d6 - Prinomastat Complex
pdb|3TBG|A Chain A, Human Cytochrome P450 2d6 With Two Thioridazines Bound In
Active Site
pdb|3TBG|B Chain B, Human Cytochrome P450 2d6 With Two Thioridazines Bound In
Active Site
pdb|3TBG|C Chain C, Human Cytochrome P450 2d6 With Two Thioridazines Bound In
Active Site
pdb|3TBG|D Chain D, Human Cytochrome P450 2d6 With Two Thioridazines Bound In
Active Site
pdb|3TDA|A Chain A, Competitive Replacement Of Thioridazine By Prinomastat In
Crystals Of Cytochrome P450 2d6
pdb|3TDA|B Chain B, Competitive Replacement Of Thioridazine By Prinomastat In
Crystals Of Cytochrome P450 2d6
pdb|3TDA|C Chain C, Competitive Replacement Of Thioridazine By Prinomastat In
Crystals Of Cytochrome P450 2d6
pdb|3TDA|D Chain D, Competitive Replacement Of Thioridazine By Prinomastat In
Crystals Of Cytochrome P450 2d6
Length = 479
Score = 100 bits (250), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 54/182 (29%), Positives = 91/182 (50%), Gaps = 2/182 (1%)
Query: 306 EDQLSDADTVAILWEMVFRGTDTVAILLEWIMARIVLHQDIQTKVQNEIDTWVGRDRHVE 365
E +D + ++ ++ G T + L W + ++LH D+Q +VQ EID +G+ R E
Sbjct: 265 ESSFNDENLRIVVADLFSAGMVTTSTTLAWGLLLMILHPDVQRRVQQEIDDVIGQVRRPE 324
Query: 366 DSDISSLPYLQAIVKEVLRMHPPGPLLSWARLAVHDVHVDKVFVPAGTTAMVNMWAITHD 425
D + +PY A++ EV R P L + D+ V +P GTT + N+ ++ D
Sbjct: 325 MGDQAHMPYTTAVIHEVQRFGDIVP-LGVTHMTSRDIEVQGFRIPKGTTLITNLSSVLKD 383
Query: 426 PTIWKNPWTFKPERFIEEDVPILGSDLRLAPFGSGRRVCPGKALGLATVHLWLARLLHRF 485
+W+ P+ F PE F++ + + L PF +GRR C G+ L + L+ LL F
Sbjct: 384 EAVWEKPFRFHPEHFLDAQGHFVKPEAFL-PFSAGRRACLGEPLARMELFLFFTSLLQHF 442
Query: 486 RW 487
+
Sbjct: 443 SF 444
>pdb|3TK3|A Chain A, Cytochrome P450 2b4 Mutant L437a In Complex With
4-(4-Chlorophenyl) Imidazole
pdb|3TK3|B Chain B, Cytochrome P450 2b4 Mutant L437a In Complex With
4-(4-Chlorophenyl) Imidazole
pdb|3TK3|C Chain C, Cytochrome P450 2b4 Mutant L437a In Complex With
4-(4-Chlorophenyl) Imidazole
pdb|3TK3|D Chain D, Cytochrome P450 2b4 Mutant L437a In Complex With
4-(4-Chlorophenyl) Imidazole
Length = 476
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 86/375 (22%), Positives = 156/375 (41%), Gaps = 48/375 (12%)
Query: 150 SGKYWRHLRRIAANHMFSPRRIS-GLEILRQRLADEMLSKVNQQMENKGVVRVREVLQKG 208
+G+ WR LRR + M R G + +R+ +E V + ++KG + +L
Sbjct: 98 NGERWRALRRFSLATM---RDFGMGKRSVEERIQEEARCLVEELRKSKGALLDNTLLFHS 154
Query: 209 SLGNILESLFGGSVISLKKEELEAMVK--------------EGYELIAQFNWEDYFPLNL 254
NI+ S+ G K ++ + +EL + F YFP
Sbjct: 155 ITSNIICSIVFGKRFDYKDPVFLRLLDLFFQSFSLISSFSSQVFELFSGF--LKYFP--- 209
Query: 255 LDFYGVKRRCHKLAARVKTLIGQVVEERKKNSGEFNNGGNDFLSALLSLPKED------Q 308
G R+ ++ + T IGQ VE+ + N DF+ L ++D +
Sbjct: 210 ----GTHRQIYRNLQEINTFIGQSVEKHRATLDPSNP--RDFIDVYLLRMEKDKSDPSSE 263
Query: 309 LSDADTVAILWEMVFRGTDTVAILLEWIMARIVLHQDIQTKVQNEIDTWVGRDRHVEDSD 368
+ + + + F GT+T + L + ++ + + +VQ EI+ +G R D
Sbjct: 264 FHHQNLILTVLSLFFAGTETTSTTLRYGFLLMLKYPHVTERVQKEIEQVIGSHRPPALDD 323
Query: 369 ISSLPYLQAIVKEVLRMHPPGPLLSWARLAVHDVHVDKVF----VPAGTTAMVNMWAITH 424
+ +PY A++ E+ R+ G L+ + H V D F +P T + + H
Sbjct: 324 RAKMPYTDAVIHEIQRL---GDLIPFG--VPHTVTKDTQFRGYVIPKNTEVFPVLSSALH 378
Query: 425 DPTIWKNPWTFKPERFIEEDVPILGSDLRLAPFGSGRRVCPGKALGLATVHLWLARLLHR 484
DP ++ P TF P F++ + L + PF G+R+C G+ + + L+ +L
Sbjct: 379 DPRYFETPNTFNPGHFLDAN-GALKRNEGFMPFSLGKRICAGEGIARTELFLFFTTILQN 437
Query: 485 FRW---LPAEPVDLS 496
F +P E +DL+
Sbjct: 438 FSIASPVPPEDIDLT 452
>pdb|1SUO|A Chain A, Structure Of Mammalian Cytochrome P450 2b4 With Bound
4-(4- Chlorophenyl)imidazole
pdb|2BDM|A Chain A, Structure Of Cytochrome P450 2b4 With Bound Bifonazole
pdb|3G5N|A Chain A, Triple Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G5N|B Chain B, Triple Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G5N|C Chain C, Triple Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G5N|D Chain D, Triple Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G93|A Chain A, Single Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G93|B Chain B, Single Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G93|C Chain C, Single Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G93|D Chain D, Single Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3KW4|A Chain A, Crystal Structure Of Cytochrome 2b4 In Complex With The
Anti-Platelet Drug Ticlopidine
pdb|3ME6|A Chain A, Crystal Structure Of Cytochrome 2b4 In Complex With The
Anti-Platelet Drug Clopidogrel
pdb|3ME6|B Chain B, Crystal Structure Of Cytochrome 2b4 In Complex With The
Anti-Platelet Drug Clopidogrel
pdb|3ME6|C Chain C, Crystal Structure Of Cytochrome 2b4 In Complex With The
Anti-Platelet Drug Clopidogrel
pdb|3ME6|D Chain D, Crystal Structure Of Cytochrome 2b4 In Complex With The
Anti-Platelet Drug Clopidogrel
pdb|3MVR|A Chain A, Crystal Structure Of Cytochrome P450 2b4-H226y In A Closed
Conformation
pdb|3MVR|B Chain B, Crystal Structure Of Cytochrome P450 2b4-H226y In A Closed
Conformation
pdb|3R1A|A Chain A, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|B Chain B, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|C Chain C, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|D Chain D, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|E Chain E, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|F Chain F, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|G Chain G, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|H Chain H, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1B|A Chain A, Open Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1B|B Chain B, Open Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1B|C Chain C, Open Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1B|D Chain D, Open Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3TMZ|A Chain A, Crystal Structure Of P450 2b4(H226y) In Complex With
Amlodipine
pdb|3UAS|A Chain A, Cytochrome P450 2b4 Covalently Bound To The
Mechanism-based Inactivator 9-ethynylphenanthrene
Length = 476
Score = 92.8 bits (229), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 86/375 (22%), Positives = 156/375 (41%), Gaps = 48/375 (12%)
Query: 150 SGKYWRHLRRIAANHMFSPRRIS-GLEILRQRLADEMLSKVNQQMENKGVVRVREVLQKG 208
+G+ WR LRR + M R G + +R+ +E V + ++KG + +L
Sbjct: 98 NGERWRALRRFSLATM---RDFGMGKRSVEERIQEEARCLVEELRKSKGALLDNTLLFHS 154
Query: 209 SLGNILESLFGGSVISLKKEELEAMVK--------------EGYELIAQFNWEDYFPLNL 254
NI+ S+ G K ++ + +EL + F YFP
Sbjct: 155 ITSNIICSIVFGKRFDYKDPVFLRLLDLFFQSFSLISSFSSQVFELFSGF--LKYFP--- 209
Query: 255 LDFYGVKRRCHKLAARVKTLIGQVVEERKKNSGEFNNGGNDFLSALLSLPKED------Q 308
G R+ ++ + T IGQ VE+ + N DF+ L ++D +
Sbjct: 210 ----GTHRQIYRNLQEINTFIGQSVEKHRATLDPSNP--RDFIDVYLLRMEKDKSDPSSE 263
Query: 309 LSDADTVAILWEMVFRGTDTVAILLEWIMARIVLHQDIQTKVQNEIDTWVGRDRHVEDSD 368
+ + + + F GT+T + L + ++ + + +VQ EI+ +G R D
Sbjct: 264 FHHQNLILTVLSLFFAGTETTSTTLRYGFLLMLKYPHVTERVQKEIEQVIGSHRPPALDD 323
Query: 369 ISSLPYLQAIVKEVLRMHPPGPLLSWARLAVHDVHVDKVF----VPAGTTAMVNMWAITH 424
+ +PY A++ E+ R+ G L+ + H V D F +P T + + H
Sbjct: 324 RAKMPYTDAVIHEIQRL---GDLIPFG--VPHTVTKDTQFRGYVIPKNTEVFPVLSSALH 378
Query: 425 DPTIWKNPWTFKPERFIEEDVPILGSDLRLAPFGSGRRVCPGKALGLATVHLWLARLLHR 484
DP ++ P TF P F++ + L + PF G+R+C G+ + + L+ +L
Sbjct: 379 DPRYFETPNTFNPGHFLDAN-GALKRNEGFMPFSLGKRICLGEGIARTELFLFFTTILQN 437
Query: 485 FRW---LPAEPVDLS 496
F +P E +DL+
Sbjct: 438 FSIASPVPPEDIDLT 452
>pdb|2Q6N|A Chain A, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|B Chain B, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|C Chain C, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|D Chain D, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|E Chain E, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|F Chain F, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|G Chain G, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
Length = 478
Score = 92.8 bits (229), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 86/375 (22%), Positives = 156/375 (41%), Gaps = 48/375 (12%)
Query: 150 SGKYWRHLRRIAANHMFSPRRIS-GLEILRQRLADEMLSKVNQQMENKGVVRVREVLQKG 208
+G+ WR LRR + M R G + +R+ +E V + ++KG + +L
Sbjct: 98 NGERWRALRRFSLATM---RDFGMGKRSVEERIQEEARCLVEELRKSKGALLDNTLLFHS 154
Query: 209 SLGNILESLFGGSVISLKKEELEAMVK--------------EGYELIAQFNWEDYFPLNL 254
NI+ S+ G K ++ + +EL + F YFP
Sbjct: 155 ITSNIICSIVFGKRFDYKDPVFLRLLDLFFQSFSLISSFSSQVFELFSGF--LKYFP--- 209
Query: 255 LDFYGVKRRCHKLAARVKTLIGQVVEERKKNSGEFNNGGNDFLSALLSLPKED------Q 308
G R+ ++ + T IGQ VE+ + N DF+ L ++D +
Sbjct: 210 ----GTHRQIYRNLQEINTFIGQSVEKHRATLDPSNP--RDFIDVYLLRMEKDKSDPSSE 263
Query: 309 LSDADTVAILWEMVFRGTDTVAILLEWIMARIVLHQDIQTKVQNEIDTWVGRDRHVEDSD 368
+ + + + F GT+T + L + ++ + + +VQ EI+ +G R D
Sbjct: 264 FHHQNLILTVLSLFFAGTETTSTTLRYGFLLMLKYPHVTERVQKEIEQVIGSHRPPALDD 323
Query: 369 ISSLPYLQAIVKEVLRMHPPGPLLSWARLAVHDVHVDKVF----VPAGTTAMVNMWAITH 424
+ +PY A++ E+ R+ G L+ + H V D F +P T + + H
Sbjct: 324 RAKMPYTDAVIHEIQRL---GDLIPFG--VPHTVTKDTQFRGYVIPKNTEVFPVLSSALH 378
Query: 425 DPTIWKNPWTFKPERFIEEDVPILGSDLRLAPFGSGRRVCPGKALGLATVHLWLARLLHR 484
DP ++ P TF P F++ + L + PF G+R+C G+ + + L+ +L
Sbjct: 379 DPRYFETPNTFNPGHFLDAN-GALKRNEGFMPFSLGKRICLGEGIARTELFLFFTTILQN 437
Query: 485 FRW---LPAEPVDLS 496
F +P E +DL+
Sbjct: 438 FSIASPVPPEDIDLT 452
>pdb|1PO5|A Chain A, Structure Of Mammalian Cytochrome P450 2b4
Length = 476
Score = 92.0 bits (227), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 85/375 (22%), Positives = 155/375 (41%), Gaps = 48/375 (12%)
Query: 150 SGKYWRHLRRIAANHMFSPRRIS-GLEILRQRLADEMLSKVNQQMENKGVVRVREVLQKG 208
+G+ WR LRR + M R G + +R+ +E V + ++KG + +L
Sbjct: 98 NGERWRALRRFSLATM---RDFGMGKRSVEERIQEEARCLVEELRKSKGALLDNTLLFHS 154
Query: 209 SLGNILESLFGGSVISLKKEELEAMVK--------------EGYELIAQFNWEDYFPLNL 254
NI+ S+ G K ++ + +EL + F L
Sbjct: 155 ITSNIICSIVFGKRFDYKDPVFLRLLDLFFQSFSLISSFSSQVFELFSGF---------L 205
Query: 255 LDFYGVKRRCHKLAARVKTLIGQVVEERKKNSGEFNNGGNDFLSALLSLPKED------Q 308
F G R+ ++ + T IGQ VE+ + N DF+ L ++D +
Sbjct: 206 KHFPGTHRQIYRNLQEINTFIGQSVEKHRATLDPSNP--RDFIDVYLLRMEKDKSDPSSE 263
Query: 309 LSDADTVAILWEMVFRGTDTVAILLEWIMARIVLHQDIQTKVQNEIDTWVGRDRHVEDSD 368
+ + + + F GT+T + L + ++ + + +VQ EI+ +G R D
Sbjct: 264 FHHQNLILTVLSLFFAGTETTSTTLRYGFLLMLKYPHVTERVQKEIEQVIGSHRPPALDD 323
Query: 369 ISSLPYLQAIVKEVLRMHPPGPLLSWARLAVHDVHVDKVF----VPAGTTAMVNMWAITH 424
+ +PY A++ E+ R+ G L+ + H V D F +P T + + H
Sbjct: 324 RAKMPYTDAVIHEIQRL---GDLIPFG--VPHTVTKDTQFRGYVIPKNTEVFPVLSSALH 378
Query: 425 DPTIWKNPWTFKPERFIEEDVPILGSDLRLAPFGSGRRVCPGKALGLATVHLWLARLLHR 484
DP ++ P TF P F++ + L + PF G+R+C G+ + + L+ +L
Sbjct: 379 DPRYFETPNTFNPGHFLDAN-GALKRNEGFMPFSLGKRICLGEGIARTELFLFFTTILQN 437
Query: 485 FRW---LPAEPVDLS 496
F +P E +DL+
Sbjct: 438 FSIASPVPPEDIDLT 452
>pdb|3IBD|A Chain A, Crystal Structure Of A Cytochrome P450 2b6 Genetic Variant
In Complex With The Inhibitor
4-(4-Chlorophenyl)imidazole
pdb|3QOA|A Chain A, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-Benzylpyridine.
pdb|3QU8|A Chain A, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3QU8|B Chain B, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3QU8|C Chain C, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3QU8|D Chain D, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3QU8|E Chain E, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3QU8|F Chain F, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3UA5|A Chain A, Crystal Structure Of P450 2b6 (Y226hK262R) IN COMPLEX WITH
TWO Molecules Of Amlodipine
pdb|3UA5|B Chain B, Crystal Structure Of P450 2b6 (Y226hK262R) IN COMPLEX WITH
TWO Molecules Of Amlodipine
Length = 476
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 99/437 (22%), Positives = 183/437 (41%), Gaps = 29/437 (6%)
Query: 99 LMALSFGPTRVIISSHPETAKEIL--SGPSFSDRPIKESARLLMFERAIG--FAPSGKYW 154
+ + GP V++ E +E L +FS R + A + F R G FA +G W
Sbjct: 46 VFTVHLGPRPVVMLCGVEAIREALVDKAEAFSGR--GKIAMVDPFFRGYGVIFA-NGNRW 102
Query: 155 RHLRRIAANHMFSPRRIS-GLEILRQRLADEMLSKVNQQMENKGVVRVREVLQKGSLGNI 213
+ LRR + M R G + +R+ +E + + ++KG + L + NI
Sbjct: 103 KVLRRFSVTTM---RDFGMGKRSVEERIQEEAQCLIEELRKSKGALMDPTFLFQSITANI 159
Query: 214 LESLFGGSVISLKKEELEAMVK---EGYELIAQFNWE--DYFPLNLLDFYGVKRRCHKLA 268
+ S+ G + +E M+ + + LI+ + + F L F G R+ +K
Sbjct: 160 ICSIVFGKRFHYQDQEFLKMLNLFYQTFSLISSVFGQLFELFSGFLKHFPGAHRQVYKNL 219
Query: 269 ARVKTLIGQVVEERKKNSGEFNNGGNDFL-SALLSLPKE-----DQLSDADTVAILWEMV 322
+ IG VE+ ++ + D + + LL + KE + S + +
Sbjct: 220 QEINAYIGHSVEKHRETLDP--SAPRDLIDTYLLHMEKEKSNAHSEFSHQNLNLNTLSLF 277
Query: 323 FRGTDTVAILLEWIMARIVLHQDIQTKVQNEIDTWVGRDRHVEDSDISSLPYLQAIVKEV 382
F GT+T + L + ++ + + +V EI+ +G R E D + +PY +A++ E+
Sbjct: 278 FAGTETTSTTLRYGFLLMLKYPHVAERVYREIEQVIGPHRPPELHDRAKMPYTEAVIYEI 337
Query: 383 LRMHPPGPLLSWARLAVHDVHVDKVFVPAGTTAMVNMWAITHDPTIWKNPWTFKPERFIE 442
R P + + +P T + + HDP ++ P F P+ F++
Sbjct: 338 QRFSDLLP-MGVPHIVTQHTSFRGYIIPKDTEVFLILSTALHDPHYFEKPDAFNPDHFLD 396
Query: 443 EDVPILGSDLRLAPFGSGRRVCPGKALGLATVHLWLARLLHRFRWL-PAEPVDLSETLKL 501
+ + ++ PF G+R+C G+ + A + L+ +L F P P D+ T +
Sbjct: 397 ANGALKKTEA-FIPFSLGKRICLGEGIARAELFLFFTTILQNFSMASPVAPEDIDLTPQE 455
Query: 502 SLEMKKPLT--CRVVPR 516
K P T R +PR
Sbjct: 456 CGVGKIPPTYQIRFLPR 472
>pdb|3E4E|A Chain A, Human Cytochrome P450 2e1 In Complex With The Inhibitor 4-
Methylpyrazole
pdb|3E4E|B Chain B, Human Cytochrome P450 2e1 In Complex With The Inhibitor 4-
Methylpyrazole
pdb|3E6I|A Chain A, Human Cytochrome P450 2e1 In Complex With The Inhibitor
Indazole
pdb|3E6I|B Chain B, Human Cytochrome P450 2e1 In Complex With The Inhibitor
Indazole
pdb|3GPH|A Chain A, Human Cytochrome P450 2e1 In Complex With
Omega-Imidazolyl-Decanoic Acid
pdb|3GPH|B Chain B, Human Cytochrome P450 2e1 In Complex With
Omega-Imidazolyl-Decanoic Acid
pdb|3KOH|A Chain A, Cytochrome P450 2e1 With Omega-Imidazolyl Octanoic Acid
pdb|3KOH|B Chain B, Cytochrome P450 2e1 With Omega-Imidazolyl Octanoic Acid
pdb|3LC4|A Chain A, Human Cytochrome P450 2e1 In Complex With
Omega-Imidazolyl-Dodecanoic Acid
pdb|3LC4|B Chain B, Human Cytochrome P450 2e1 In Complex With
Omega-Imidazolyl-Dodecanoic Acid
pdb|3T3Z|A Chain A, Human Cytochrome P450 2e1 In Complex With Pilocarpine
pdb|3T3Z|B Chain B, Human Cytochrome P450 2e1 In Complex With Pilocarpine
pdb|3T3Z|C Chain C, Human Cytochrome P450 2e1 In Complex With Pilocarpine
pdb|3T3Z|D Chain D, Human Cytochrome P450 2e1 In Complex With Pilocarpine
Length = 476
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 72/276 (26%), Positives = 124/276 (44%), Gaps = 13/276 (4%)
Query: 230 LEAMVKEGYELIAQ--FNWEDYFPLNLLDFYGVKRRCHKLAARVKTLIGQVVEERKKNSG 287
L + E + L++ + FP L G R+ K A VK + + V+E ++
Sbjct: 178 LMYLFNENFHLLSTPWLQLYNNFPSFLHYLPGSHRKVIKNVAEVKEYVSERVKEHHQSLD 237
Query: 288 EFNNGGNDFLSALL-SLPKE----DQLSDADTVAI-LWEMVFRGTDTVAILLEWIMARIV 341
N D LL + KE ++L D + + + ++ F GT+T + L + + ++
Sbjct: 238 P--NCPRDLTDCLLVEMEKEKHSAERLYTMDGITVTVADLFFAGTETTSTTLRYGLLILM 295
Query: 342 LHQDIQTKVQNEIDTWVGRDRHVEDSDISSLPYLQAIVKEVLRMHPPGPLLSWARLAVHD 401
+ +I+ K+ EID +G R D +PY+ A+V E+ R P + A D
Sbjct: 296 KYPEIEEKLHEEIDRVIGPSRIPAIKDRQEMPYMDAVVHEIQRFITLVP-SNLPHEATRD 354
Query: 402 VHVDKVFVPAGTTAMVNMWAITHDPTIWKNPWTFKPERFIEEDVPILGSDLRLAPFGSGR 461
+P GT + + ++ +D + +P FKPE F+ E+ SD PF +G+
Sbjct: 355 TIFRGYLIPKGTVVVPTLDSVLYDNQEFPDPEKFKPEHFLNENGKFKYSDY-FKPFSTGK 413
Query: 462 RVCPGKALGLATVHLWLARLLHRFRWLP-AEPVDLS 496
RVC G+ L + L L +L F P +P D+
Sbjct: 414 RVCAGEGLARMELFLLLCAILQHFNLKPLVDPKDID 449
>pdb|4H1N|A Chain A, Crystal Structure Of P450 2b4 F297a Mutant In Complex With
Anti- Platelet Drug Clopidogrel
Length = 479
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 85/375 (22%), Positives = 155/375 (41%), Gaps = 48/375 (12%)
Query: 150 SGKYWRHLRRIAANHMFSPRRIS-GLEILRQRLADEMLSKVNQQMENKGVVRVREVLQKG 208
+G+ WR LRR + M R G + +R+ +E V + ++KG + +L
Sbjct: 98 NGERWRALRRFSLATM---RDFGMGKRSVEERIQEEARCLVEELRKSKGALLDNTLLFHS 154
Query: 209 SLGNILESLFGGSVISLKKEELEAMVK--------------EGYELIAQFNWEDYFPLNL 254
NI+ S+ G K ++ + +EL + F YFP
Sbjct: 155 ITSNIICSIVFGKRFDYKDPVFLRLLDLFFQSFSLISSFSSQVFELFSGF--LKYFP--- 209
Query: 255 LDFYGVKRRCHKLAARVKTLIGQVVEERKKNSGEFNNGGNDFLSALLSLPKED------Q 308
G R+ ++ + T IGQ VE+ + N DF+ L ++D +
Sbjct: 210 ----GTHRQIYRNLQEINTFIGQSVEKHRATLDPSNP--RDFIDVYLLRMEKDKSDPSSE 263
Query: 309 LSDADTVAILWEMVFRGTDTVAILLEWIMARIVLHQDIQTKVQNEIDTWVGRDRHVEDSD 368
+ + + + GT+T + L + ++ + + +VQ EI+ +G R D
Sbjct: 264 FHHQNLILTVLSLFAAGTETTSTTLRYGFLLMLKYPHVTERVQKEIEQVIGSHRPPALDD 323
Query: 369 ISSLPYLQAIVKEVLRMHPPGPLLSWARLAVHDVHVDKVF----VPAGTTAMVNMWAITH 424
+ +PY A++ E+ R+ G L+ + H V D F +P T + + H
Sbjct: 324 RAKMPYTDAVIHEIQRL---GDLIPFG--VPHTVTKDTQFRGYVIPKNTEVFPVLSSALH 378
Query: 425 DPTIWKNPWTFKPERFIEEDVPILGSDLRLAPFGSGRRVCPGKALGLATVHLWLARLLHR 484
DP ++ P TF P F++ + L + PF G+R+C G+ + + L+ +L
Sbjct: 379 DPRYFETPNTFNPGHFLDAN-GALKRNEGFMPFSLGKRICLGEGIARTELFLFFTTILQN 437
Query: 485 FRW---LPAEPVDLS 496
F +P E +DL+
Sbjct: 438 FSIASPVPPEDIDLT 452
>pdb|2Q9F|A Chain A, Crystal Structure Of Human Cytochrome P450 46a1 In Complex
With Cholesterol-3-Sulphate
pdb|2Q9G|A Chain A, Crystal Structure Of Human Cytochrome P450 46a1
pdb|3MDM|A Chain A, Thioperamide Complex Of Cytochrome P450 46a1
pdb|3MDR|A Chain A, Tranylcypromine Complex Of Cytochrome P450 46a1
pdb|3MDR|B Chain B, Tranylcypromine Complex Of Cytochrome P450 46a1
pdb|3MDT|A Chain A, Voriconazole Complex Of Cytochrome P450 46a1
pdb|3MDT|B Chain B, Voriconazole Complex Of Cytochrome P450 46a1
pdb|3MDV|A Chain A, Clotrimazole Complex Of Cytochrome P450 46a1
pdb|3MDV|B Chain B, Clotrimazole Complex Of Cytochrome P450 46a1
pdb|4ENH|A Chain A, Crystal Structure Of Human Cytochrome P450 Cyp46a1 With
Fluvoxamine Bound
pdb|4FIA|A Chain A, Crystal Structure Of Human Cyp46a1 P450 With Bicalutamide
Bound
Length = 456
Score = 89.0 bits (219), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 101/429 (23%), Positives = 187/429 (43%), Gaps = 35/429 (8%)
Query: 104 FGPTRVIISSHPETAKEILSGPSFS-DRPIKESARLLMFERAIG--FAPSGKY--WRHLR 158
F T VI++S PE+ K+ L ++ D + + + + ER G Y W R
Sbjct: 32 FHKTSVIVTS-PESVKKFLMSTKYNKDSKMYRALQTVFGERLFGQGLVSECNYERWHKQR 90
Query: 159 RIAANHMFSPRRISGLEILRQRLADEMLSKVNQQMENKGVVRVREVLQKGSLGNILESLF 218
R+ +S +E ++ A++++ + + + + V ++++L ++ + ++ F
Sbjct: 91 RVIDLAFSRSSLVSLMETFNEK-AEQLVEILEAKADGQTPVSMQDMLTYTAMDILAKAAF 149
Query: 219 G--GSVISLKKEELEAMVKEGYE-LIAQFNWEDYFPLNLLDFYGVKRRCHKLAARVKTLI 275
G S++ ++ L VK E + A N L F KR+ + +
Sbjct: 150 GMETSMLLGAQKPLSQAVKLMLEGITASRN-------TLAKFLPGKRKQLREVRESIRFL 202
Query: 276 GQV----VEERKKNSGEFNNGGNDFLSALLSLPKEDQLSDADTVAILWEMVFRGTDTVAI 331
QV V+ R++ D L+ +L +E D + G +T A
Sbjct: 203 RQVGRDWVQRRREALKRGEEVPADILTQILK-AEEGAQDDEGLLDNFVTFFIAGHETSAN 261
Query: 332 LLEWIMARIVLHQDIQTKVQNEIDTWVGRDRHVEDSDISSLPYLQAIVKEVLRMHPPGPL 391
L + + + +I ++Q E+D +G R+++ D+ L YL ++KE LR++PP
Sbjct: 262 HLAFTVMELSRQPEIVARLQAEVDEVIGSKRYLDFEDLGRLQYLSQVLKESLRLYPP--- 318
Query: 392 LSWA--RLAVHDVHVDKVFVPAGTTAMVNMWAITHDPTIWKNPWTFKPERFIEEDVPILG 449
+W RL + +D V VP T + + + + T +++P TF P+RF P
Sbjct: 319 -AWGTFRLLEEETLIDGVRVPGNTPLLFSTYVMGRMDTYFEDPLTFNPDRF-GPGAP--K 374
Query: 450 SDLRLAPFGSGRRVCPGKALGLATVHLWLARLLHR--FRWLPAEPVDLSETLKLSLEMKK 507
PF G R C G+ V + +A+LL R FR +P + L E + +L+
Sbjct: 375 PRFTYFPFSLGHRSCIGQQFAQMEVKVVMAKLLQRLEFRLVPGQRFGLQE--QATLKPLD 432
Query: 508 PLTCRVVPR 516
P+ C + PR
Sbjct: 433 PVLCTLRPR 441
>pdb|3QZ1|A Chain A, Crystal Structure Of Bovine Steroid Of 21-Hydroxylase
(P450c21)
pdb|3QZ1|B Chain B, Crystal Structure Of Bovine Steroid Of 21-Hydroxylase
(P450c21)
pdb|3QZ1|C Chain C, Crystal Structure Of Bovine Steroid Of 21-Hydroxylase
(P450c21)
pdb|3QZ1|D Chain D, Crystal Structure Of Bovine Steroid Of 21-Hydroxylase
(P450c21)
Length = 496
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 66/208 (31%), Positives = 101/208 (48%), Gaps = 21/208 (10%)
Query: 320 EMVFRGTDTVAILLEWIMARIVLHQDIQTKVQNEIDTWVGRD---RHVEDSDISSLPYLQ 376
++ GT+T A L W +A ++ H +IQ ++Q E+D +G V D + LP L
Sbjct: 286 DLFIGGTETTASTLSWAVAFLLHHPEIQRRLQEELDRELGPGASCSRVTYKDRARLPLLN 345
Query: 377 AIVKEVLRMHPPGPLLSWARLAVHDVHVDKVF---VPAGTTAMVNMWAITHDPTIWKNPW 433
A + EVLR+ P PL L +F +P G + N+ D T+W+ P
Sbjct: 346 ATIAEVLRLRPVVPL----ALPHRTTRPSSIFGYDIPEGMVVIPNLQGAHLDETVWEQPH 401
Query: 434 TFKPERFIEEDVPILGSDLRLAPFGSGRRVCPGKALGLATVHLWLARLLHRFRWLPAEPV 493
F+P+RF+E G++ FG G RVC G++L + + LARLL F LP PV
Sbjct: 402 EFRPDRFLEP-----GANPSALAFGCGARVCLGESLARLELFVVLARLLQAFTLLPP-PV 455
Query: 494 DLSETLK----LSLEMK-KPLTCRVVPR 516
+L+ + +K +P R+ PR
Sbjct: 456 GALPSLQPDPYCGVNLKVQPFQVRLQPR 483
>pdb|3N9Y|A Chain A, Crystal Structure Of Human Cyp11a1 In Complex With
Cholesterol
pdb|3N9Y|B Chain B, Crystal Structure Of Human Cyp11a1 In Complex With
Cholesterol
pdb|3N9Z|A Chain A, Crystal Structure Of Human Cyp11a1 In Complex With 22-
Hydroxycholesterol
pdb|3N9Z|B Chain B, Crystal Structure Of Human Cyp11a1 In Complex With 22-
Hydroxycholesterol
pdb|3NA1|A Chain A, Crystal Structure Of Human Cyp11a1 In Complex With 20-
Hydroxycholesterol
pdb|3NA1|B Chain B, Crystal Structure Of Human Cyp11a1 In Complex With 20-
Hydroxycholesterol
Length = 487
Score = 85.9 bits (211), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 64/226 (28%), Positives = 110/226 (48%), Gaps = 12/226 (5%)
Query: 294 NDFLSALLSLPKEDQLSDADTVAILWEMVFRGTDTVAILLEWIMARIVLHQDIQTKVQNE 353
+D+ L L + ++S D A + EM+ G DT ++ L+W + + + KVQ+
Sbjct: 256 HDYRGILYRLLGDSKMSFEDIKANVTEMLAGGVDTTSMTLQWHLYEMARN----LKVQDM 311
Query: 354 IDTWVGRDRHVEDSDISSL----PYLQAIVKEVLRMHPPGPLLSWARLAVHDVHVDKVFV 409
+ V RH D++++ P L+A +KE LR+HP L R V+D+ + +
Sbjct: 312 LRAEVLAARHQAQGDMATMLQLVPLLKASIKETLRLHPISVTLQ--RYLVNDLVLRDYMI 369
Query: 410 PAGTTAMVNMWAITHDPTIWKNPWTFKPERFIEEDVPILGSDLRLAPFGSGRRVCPGKAL 469
PA T V ++A+ +PT + +P F P R++ +D I + R FG G R C G+ +
Sbjct: 370 PAKTLVQVAIYALGREPTFFFDPENFDPTRWLSKDKNI--TYFRNLGFGWGVRQCLGRRI 427
Query: 470 GLATVHLWLARLLHRFRWLPAEPVDLSETLKLSLEMKKPLTCRVVP 515
+ ++L +L FR D+ T L L +KP++ P
Sbjct: 428 AELEMTIFLINMLENFRVEIQHLSDVGTTFNLILMPEKPISFTFWP 473
>pdb|3NA0|A Chain A, Crystal Structure Of Human Cyp11a1 In Complex With 20,22-
Dihydroxycholesterol
pdb|3NA0|B Chain B, Crystal Structure Of Human Cyp11a1 In Complex With 20,22-
Dihydroxycholesterol
Length = 471
Score = 85.5 bits (210), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 64/226 (28%), Positives = 110/226 (48%), Gaps = 12/226 (5%)
Query: 294 NDFLSALLSLPKEDQLSDADTVAILWEMVFRGTDTVAILLEWIMARIVLHQDIQTKVQNE 353
+D+ L L + ++S D A + EM+ G DT ++ L+W + + + KVQ+
Sbjct: 253 HDYRGILYRLLGDSKMSFEDIKANVTEMLAGGVDTTSMTLQWHLYEMARN----LKVQDM 308
Query: 354 IDTWVGRDRHVEDSDISSL----PYLQAIVKEVLRMHPPGPLLSWARLAVHDVHVDKVFV 409
+ V RH D++++ P L+A +KE LR+HP L R V+D+ + +
Sbjct: 309 LRAEVLAARHQAQGDMATMLQLVPLLKASIKETLRLHPISVTLQ--RYLVNDLVLRDYMI 366
Query: 410 PAGTTAMVNMWAITHDPTIWKNPWTFKPERFIEEDVPILGSDLRLAPFGSGRRVCPGKAL 469
PA T V ++A+ +PT + +P F P R++ +D I + R FG G R C G+ +
Sbjct: 367 PAKTLVQVAIYALGREPTFFFDPENFDPTRWLSKDKNI--TYFRNLGFGWGVRQCLGRRI 424
Query: 470 GLATVHLWLARLLHRFRWLPAEPVDLSETLKLSLEMKKPLTCRVVP 515
+ ++L +L FR D+ T L L +KP++ P
Sbjct: 425 AELEMTIFLINMLENFRVEIQHLSDVGTTFNLILMPEKPISFTFWP 470
>pdb|3K9V|A Chain A, Crystal Structure Of Rat Mitochondrial P450 24a1 S57d In
Complex With Chaps
pdb|3K9V|B Chain B, Crystal Structure Of Rat Mitochondrial P450 24a1 S57d In
Complex With Chaps
pdb|3K9Y|A Chain A, Crystal Structure Of Rat Mitochondrial P450 24a1 S57d In
Complex With Cymal-5
pdb|3K9Y|B Chain B, Crystal Structure Of Rat Mitochondrial P450 24a1 S57d In
Complex With Cymal-5
Length = 482
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 103/457 (22%), Positives = 197/457 (43%), Gaps = 44/457 (9%)
Query: 64 LRGPVGWPIVGTLPCM---GSL--AHRKLASMAASLGANRLMAL-SFGPTRV-------- 109
L GP WP++G+L + G L H LA G M L SF +
Sbjct: 26 LPGPTNWPLLGSLLEIFWKGGLKKQHDTLAEYHKKYGQIFRMKLGSFDSVHLGSPSLLEA 85
Query: 110 ---IISSHPETAKEILSGPSFSDRPIKESARLLMFERAIGFAPSGKYWRHLRRIAANHMF 166
S+HP+ EI ++ D E+ L++ E G+ W+ +R +
Sbjct: 86 LYRTESAHPQRL-EIKPWKAYRDHR-NEAYGLMILE--------GQEWQRVRSAFQKKLM 135
Query: 167 SPRRISGLEILRQRLADEMLSKVNQQMENKG-VVRVREVLQKGSLGNILESLFGGSVISL 225
P I L+ + + L ++++ + +G + + L K S +I L+ L
Sbjct: 136 KPVEIMKLDKKINEVLADFLERMDELCDERGRIPDLYSELNKWSFESICLVLYEKRFGLL 195
Query: 226 KKE-ELEAM--VKEGYELIAQFNWEDYFPLNLLDFYGVKR-RCHKLA-ARVKTLIGQVVE 280
+KE E EA+ + +++ F P+ L K + H LA + + ++
Sbjct: 196 QKETEEEALTFITAIKTMMSTFGKMMVTPVELHKRLNTKVWQAHTLAWDTIFKSVKPCID 255
Query: 281 ERKKNSGEFNNGGNDFLSALLSLPKEDQLSDADTVAILWEMVFRGTDTVAILLEWIMARI 340
R + + G DFL + ++D LS + A + E+ +T A L WI+ +
Sbjct: 256 NRLQRYSQ--QPGADFLCDIY---QQDHLSKKELYAAVTELQLAAVETTANSLMWILYNL 310
Query: 341 VLHQDIQTKVQNEIDTWVGRDRHVEDSDISSLPYLQAIVKEVLRMHPPGPLLSWARLAVH 400
+ Q ++ E+ + + ++ D+ ++PYL+A +KE +R+ P P + R
Sbjct: 311 SRNPQAQRRLLQEVQSVLPDNQTPRAEDLRNMPYLKACLKESMRLTPSVPFTT--RTLDK 368
Query: 401 DVHVDKVFVPAGTTAMVNMWAITHDPTIWKNPWTFKPERFIEEDVPILGSDLRLAPFGSG 460
+ + +P GT +N + +++ F+PER+++++ I + PFG G
Sbjct: 369 PTVLGEYALPKGTVLTLNTQVLGSSEDNFEDSHKFRPERWLQKEKKI--NPFAHLPFGIG 426
Query: 461 RRVCPGKALGLATVHLWLARLLHRFRWLPA--EPVDL 495
+R+C G+ L +HL L ++ ++ + EPV++
Sbjct: 427 KRMCIGRRLAELQLHLALCWIIQKYDIVATDNEPVEM 463
>pdb|3MZS|A Chain A, Crystal Structure Of Cytochrome P450 Cyp11a1 In Complex
With 22- Hydroxy-Cholesterol
pdb|3MZS|B Chain B, Crystal Structure Of Cytochrome P450 Cyp11a1 In Complex
With 22- Hydroxy-Cholesterol
pdb|3MZS|C Chain C, Crystal Structure Of Cytochrome P450 Cyp11a1 In Complex
With 22- Hydroxy-Cholesterol
pdb|3MZS|D Chain D, Crystal Structure Of Cytochrome P450 Cyp11a1 In Complex
With 22- Hydroxy-Cholesterol
Length = 486
Score = 78.6 bits (192), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 88/387 (22%), Positives = 161/387 (41%), Gaps = 31/387 (8%)
Query: 141 FERAIG--FAPSGKYWRHLRRIAANHMFSPRRISGLEILRQRLADEMLS----KVNQQME 194
+++ IG F SG W+ R + + +P I L ++ + +S ++ QQ
Sbjct: 95 YQKPIGVLFKKSGT-WKKDRVVLNTEVMAPEAIKNFIPLLNPVSQDFVSLLHKRIKQQGS 153
Query: 195 NKGVVRVREVLQKGSLGNILESLFG---GSVISLKKEELEAMVKEGYELIAQFNWEDYFP 251
K V ++E L + +I +FG G + E + + Y++ P
Sbjct: 154 GKFVGDIKEDLFHFAFESITNVMFGERLGMLEETVNPEAQKFIDAVYKMFHTSVPLLNVP 213
Query: 252 LNLLDFYGVKRRCHKLAA-----RVKTLIGQVVEERKKNSGEFNNGGNDFLSALLSLPKE 306
L + K +AA ++ + + EF N + L L K
Sbjct: 214 PELYRLFRTKTWRDHVAAWDTIFNKAEKYTEIFYQDLRRKTEFRN----YPGILYCLLKS 269
Query: 307 DQLSDADTVAILWEMVFRGTDTVAILLEWIMARIVLHQDIQTKVQNEIDTWVGRDRHVED 366
+++ D A + EM+ G +T ++ L+W + + ++Q ++ E V R +
Sbjct: 270 EKMLLEDVKANITEMLAGGVNTTSMTLQWHLYEMARSLNVQEMLREE----VLNARRQAE 325
Query: 367 SDISSL----PYLQAIVKEVLRMHPPGPLLSWARLAVHDVHVDKVFVPAGTTAMVNMWAI 422
DIS + P L+A +KE LR+HP ++ R D+ + +PA T V ++A+
Sbjct: 326 GDISKMLQMVPLLKASIKETLRLHPIS--VTLQRYPESDLVLQDYLIPAKTLVQVAIYAM 383
Query: 423 THDPTIWKNPWTFKPERFIEEDVPILGSDLRLAPFGSGRRVCPGKALGLATVHLWLARLL 482
DP + +P F P R++ +D ++ R FG G R C G+ + + L+L +L
Sbjct: 384 GRDPAFFSSPDKFDPTRWLSKDKDLI--HFRNLGFGWGVRQCVGRRIAELEMTLFLIHIL 441
Query: 483 HRFRWLPAEPVDLSETLKLSLEMKKPL 509
F+ D+ L L KP+
Sbjct: 442 ENFKVEMQHIGDVDTIFNLILTPDKPI 468
>pdb|3DBG|A Chain A, Crystal Structure Of Cytochrome P450 170a1 (Cyp170a1) From
Streptomyces Coelicolor
pdb|3DBG|B Chain B, Crystal Structure Of Cytochrome P450 170a1 (Cyp170a1) From
Streptomyces Coelicolor
pdb|3EL3|A Chain A, Distinct Monooxygenase And Farnesene Synthase Active Sites
In Cytochrome P450 170a1
pdb|3EL3|B Chain B, Distinct Monooxygenase And Farnesene Synthase Active Sites
In Cytochrome P450 170a1
Length = 467
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 54/233 (23%), Positives = 113/233 (48%), Gaps = 16/233 (6%)
Query: 260 VKRRCHKLAARVKTLIGQVVEERKKNSGEFNNGGNDFLSALLSLPKE--DQLSDADTVAI 317
RR + A + L+ +++ ER+ + +D L+ALL + D + + +
Sbjct: 212 ANRRFNDALADLHLLVDEIIAERRAS----GQKPDDLLTALLEAKDDNGDPIGEQEIHDQ 267
Query: 318 LWEMVFRGTDTVAILLEWIMARIVLHQDIQTKVQNEIDTWVGRDRHVEDSDISSLPYLQA 377
+ ++ G++T+A + W++ + H + ++++E++ G R V D+ L +
Sbjct: 268 VVAILTPGSETIASTIMWLLQALADHPEHADRIRDEVEAVTG-GRPVAFEDVRKLRHTGN 326
Query: 378 IVKEVLRMHPPGPLLSWARLAVHDVHVDKVFVPAGTTAMVNMWAITHDPTIWKNPWTFKP 437
++ E +R+ P +L+ R AV + + +PAG + + +AI DP + + F P
Sbjct: 327 VIVEAMRLRPAVWVLT--RRAVAESELGGYRIPAGADIIYSPYAIQRDPKSYDDNLEFDP 384
Query: 438 ERFIEE---DVPILGSDLRLAPFGSGRRVCPGKALGLATVHLWLARLLHRFRW 487
+R++ E +VP + PF +G+R CP +A + L A L ++R+
Sbjct: 385 DRWLPERAANVPKYA----MKPFSAGKRKCPSDHFSMAQLTLITAALATKYRF 433
>pdb|3KHM|A Chain A, Crystal Structure Of Sterol 14alpha-Demethylase (Cyp51)
From Trypanosoma Cruzi In Complex With Inhibitor
Fluconazole
Length = 464
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 56/229 (24%), Positives = 100/229 (43%), Gaps = 15/229 (6%)
Query: 263 RCHKLAARVKTLIGQVVEERKKNSGEFNNGGNDFLSALLSLPKED--QLSDADTVAILWE 320
RC + A ++ ++G+++ R+K +N +D L LL D ++S + ++
Sbjct: 205 RCREARAELQKILGEIIVAREKEEASKDNNTSDLLGGLLKAVYRDGTRMSLHEVCGMIVA 264
Query: 321 MVFRGTDTVAILLEWIMARIVLHQDIQ--TKVQNEIDTWVGRDRHVEDSDISSLPYLQAI 378
+F G T I W M ++ ++ + K+ EID + + + D+ + +P+ +
Sbjct: 265 AMFAGQHTSTITTSWSMLHLMHPKNKKWLDKLHKEIDEFPAQLNY--DNVMDEMPFAERC 322
Query: 379 VKEVLRMHPPGPLLSWARLAVHDVHVDKVFVPAGTTAMVNMWAITHDPTIWKNPWTFKPE 438
V+E +R P PLL R+ +V V VP G + HD + NP + PE
Sbjct: 323 VRESIRRDP--PLLMVMRMVKAEVKVGSYVVPKGDIIACSPLLSHHDEEAFPNPRLWDPE 380
Query: 439 RFIEEDVPILGSDLRLAPFGSGRRVCPGKALGLATVHLWLARLLHRFRW 487
R + D +G FG+G C G+ L V LA + +
Sbjct: 381 RDEKVDGAFIG-------FGAGVHKCIGQKFALLQVKTILATAFREYDF 422
>pdb|3K1O|A Chain A, Crystal Structure Of Sterol 14-alpha Demethylase (cyp51)
From Trypanosoma Cruzi In Complex With A Potential
Antichagasic Drug, Posaconazole
pdb|3KSW|A Chain A, Crystal Structure Of Sterol 14alpha-demethylase (cyp51)
From Trypanosoma Cruzi In Complex With An Inhibitor Vnf
((4-(4-
Chlorophenyl)-n-[2-(1h-imidazol-1-yl)-1-
phenylethyl]benzamide)
Length = 458
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/229 (24%), Positives = 100/229 (43%), Gaps = 15/229 (6%)
Query: 263 RCHKLAARVKTLIGQVVEERKKNSGEFNNGGNDFLSALLSLPKED--QLSDADTVAILWE 320
RC + A ++ ++G+++ R+K +N +D L LL D ++S + ++
Sbjct: 199 RCREARAELQKILGEIIVAREKEEASKDNNTSDLLGGLLKAVYRDGTRMSLHEVCGMIVA 258
Query: 321 MVFRGTDTVAILLEWIMARIVLHQDIQ--TKVQNEIDTWVGRDRHVEDSDISSLPYLQAI 378
+F G T I W M ++ ++ + K+ EID + + + D+ + +P+ +
Sbjct: 259 AMFAGQHTSTITTSWSMLHLMHPKNKKWLDKLHKEIDEFPAQLNY--DNVMDEMPFAERC 316
Query: 379 VKEVLRMHPPGPLLSWARLAVHDVHVDKVFVPAGTTAMVNMWAITHDPTIWKNPWTFKPE 438
V+E +R P PLL R+ +V V VP G + HD + NP + PE
Sbjct: 317 VRESIRRDP--PLLMVMRMVKAEVKVGSYVVPKGDIIACSPLLSHHDEEAFPNPRLWDPE 374
Query: 439 RFIEEDVPILGSDLRLAPFGSGRRVCPGKALGLATVHLWLARLLHRFRW 487
R + D +G FG+G C G+ L V LA + +
Sbjct: 375 RDEKVDGAFIG-------FGAGVHKCIGQKFALLQVKTILATAFREYDF 416
>pdb|2WUZ|A Chain A, X-Ray Structure Of Cyp51 From Trypanosoma Cruzi In Complex
With Fluconazole In Alternative Conformation
pdb|2WUZ|B Chain B, X-Ray Structure Of Cyp51 From Trypanosoma Cruzi In Complex
With Fluconazole In Alternative Conformation
pdb|2WX2|A Chain A, X-Ray Structure Of Cyp51 From The Human Pathogen
Trypanosoma Cruzi In Complex With Fluconazole
pdb|2WX2|B Chain B, X-Ray Structure Of Cyp51 From The Human Pathogen
Trypanosoma Cruzi In Complex With Fluconazole
Length = 473
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/229 (24%), Positives = 100/229 (43%), Gaps = 15/229 (6%)
Query: 263 RCHKLAARVKTLIGQVVEERKKNSGEFNNGGNDFLSALLSLPKED--QLSDADTVAILWE 320
RC + A ++ ++G+++ R+K +N +D L LL D ++S + ++
Sbjct: 214 RCREARAELQKILGEIIVAREKEEASKDNNTSDLLGGLLKAVYRDGTRMSLHEVCGMIVA 273
Query: 321 MVFRGTDTVAILLEWIMARIVLHQDIQ--TKVQNEIDTWVGRDRHVEDSDISSLPYLQAI 378
+F G T I W M ++ ++ + K+ EID + + + D+ + +P+ +
Sbjct: 274 AMFAGQHTSTITTSWSMLHLMHPKNKKWLDKLHKEIDEFPAQLNY--DNVMDEMPFAERC 331
Query: 379 VKEVLRMHPPGPLLSWARLAVHDVHVDKVFVPAGTTAMVNMWAITHDPTIWKNPWTFKPE 438
V+E +R P PLL R+ +V V VP G + HD + NP + PE
Sbjct: 332 VRESIRRDP--PLLMVMRMVKAEVKVGSYVVPKGDIIACSPLLSHHDEEAFPNPRLWDPE 389
Query: 439 RFIEEDVPILGSDLRLAPFGSGRRVCPGKALGLATVHLWLARLLHRFRW 487
R + D +G FG+G C G+ L V LA + +
Sbjct: 390 RDEKVDGAFIG-------FGAGVHKCIGQKFALLQVKTILATAFREYDF 431
>pdb|1EA1|A Chain A, Cytochrome P450 14 Alpha-Sterol Demethylase (Cyp51) From
Mycobacterium Tuberculosis In Complex With Fluconazole
pdb|1E9X|A Chain A, Cytochrome P450 14 Alpha-Sterol Demethylase (Cyp51) From
Mycobacterium Tuberculosis In Complex With 4-
Phenylimidazole
pdb|1H5Z|A Chain A, Cytochrome P450 14 Alpha-Sterol Demethylase (Cyp51) From
Mycobacterium Tuberculosis In Ferric Low-Spin State
Length = 455
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/228 (23%), Positives = 99/228 (43%), Gaps = 7/228 (3%)
Query: 290 NNGGNDFLSALLSLPKED---QLSDADTVAILWEMVFRGTDTVAILLEWIMARIVLHQDI 346
+ D L L+++ E + S + + M+F G T + W + ++ H+D
Sbjct: 219 DKSDRDMLDVLIAVKAETGTPRFSADEITGMFISMMFAGHHTSSGTASWTLIELMRHRDA 278
Query: 347 QTKVQNEIDTWVGRDRHVEDSDISSLPYLQAIVKEVLRMHPPGPLLSWARLAVHDVHVDK 406
V +E+D G R V + +P L+ ++KE LR+HP PL+ R+A + V
Sbjct: 279 YAAVIDELDELYGDGRSVSFHALRQIPQLENVLKETLRLHP--PLIILMRVAKGEFEVQG 336
Query: 407 VFVPAGTTAMVNMWAITHDPTIWKNPWTFKPERFIEEDVPILGSDLRLAPFGSGRRVCPG 466
+ G + P + +P F P R+ + L + PFG+GR C G
Sbjct: 337 HRIHEGDLVAASPAISNRIPEDFPDPHDFVPARYEQPRQEDLLNRWTWIPFGAGRHRCVG 396
Query: 467 KALGLATVHLWLARLLHRFRWLPAEPVD--LSETLKLSLEMKKPLTCR 512
A + + + LL + + A+P + ++ K+ +++ +P R
Sbjct: 397 AAFAIMQIKAIFSVLLREYEFEMAQPPESYRNDHSKMVVQLAQPACVR 444
>pdb|1X8V|A Chain A, Estriol-Bound And Ligand-Free Structures Of Sterol
14alpha- Demethylase (Cyp51)
pdb|2BZ9|A Chain A, Ligand-Free Structure Of Sterol 14alpha-Demethylase From
Mycobacterium Tuberculosis In P2(1) Space Group
pdb|2BZ9|B Chain B, Ligand-Free Structure Of Sterol 14alpha-Demethylase From
Mycobacterium Tuberculosis In P2(1) Space Group
pdb|2CI0|A Chain A, High Throughput Screening And X-Ray Crystallography
Assisted Evaluation Of Small Molecule Scaffolds For
Cyp51 Inhibitors
pdb|2CIB|A Chain A, High Throughput Screening And X-Ray Crystallography
Assisted Evaluation Of Small Molecule Scaffolds For
Cyp51 Inhibitors
pdb|2VKU|A Chain A, 4,4'-Dihydroxybenzophenone Mimics Sterol Substrate In The
Binding Site Of Sterol 14alpha-Demethylase (Cyp51) In
The X-Ray Structure Of The Complex
pdb|2W09|A Chain A, Cyp51 Of M. Tuberculosis Bound To An Inhibitor Cis-4-
Methyl-N-[(1s)-3-(Methylsulfanyl)-1-(Pyridin-4-
Ylcarbamoyl)propyl]cyclohexanecarboxamide
pdb|2W0B|A Chain A, Cyp51 Of M. Tuberculosis Bound To An Inhibitor 3-{[(4-
Methylphenyl)sulfonyl]amino}propyl Pyridin-4-Ylcarbamate
Length = 455
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 53/228 (23%), Positives = 99/228 (43%), Gaps = 7/228 (3%)
Query: 290 NNGGNDFLSALLSLPKED---QLSDADTVAILWEMVFRGTDTVAILLEWIMARIVLHQDI 346
+ D L L+++ E + S + + M+F G T + W + ++ H+D
Sbjct: 219 DKSDRDMLDVLIAVKAETGTPRFSADEITGMFISMMFAGHHTSSGTASWTLIELMRHRDA 278
Query: 347 QTKVQNEIDTWVGRDRHVEDSDISSLPYLQAIVKEVLRMHPPGPLLSWARLAVHDVHVDK 406
V +E+D G R V + +P L+ ++KE LR+HP PL+ R+A + V
Sbjct: 279 YAAVIDELDELYGDGRSVSFHALRQIPQLENVLKETLRLHP--PLIILMRVAKGEFEVQG 336
Query: 407 VFVPAGTTAMVNMWAITHDPTIWKNPWTFKPERFIEEDVPILGSDLRLAPFGSGRRVCPG 466
+ G + P + +P F P R+ + L + PFG+GR C G
Sbjct: 337 HRIHEGDLVAASPAISNRIPEDFPDPHDFVPARYEQPRQEDLLNRWTWIPFGAGRHRCVG 396
Query: 467 KALGLATVHLWLARLLHRFRWLPAEPVD--LSETLKLSLEMKKPLTCR 512
A + + + LL + + A+P + ++ K+ +++ +P R
Sbjct: 397 AAFAIMQIKAIFSVLLREYEFEMAQPPESYRNDHSKMVVQLAQPAAVR 444
>pdb|2VE3|A Chain A, Retinoic Acid Bound Cyanobacterial Cyp120a1
pdb|2VE3|B Chain B, Retinoic Acid Bound Cyanobacterial Cyp120a1
pdb|2VE4|A Chain A, Substrate Free Cyanobacterial Cyp120a1
pdb|2VE4|B Chain B, Substrate Free Cyanobacterial Cyp120a1
Length = 444
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 47/180 (26%), Positives = 79/180 (43%), Gaps = 5/180 (2%)
Query: 321 MVFRGTDTVAILLEWIMARIVLHQDIQTKVQNEIDTWVGRDRHVEDSDISSLPYLQAIVK 380
++F G +T+ L + H DI+ +V+ E + + + + + +PYL +++
Sbjct: 251 LLFAGHETLTSALSSFCLLLGQHSDIRERVRQEQNK-LQLSQELTAETLKKMPYLDQVLQ 309
Query: 381 EVLRMHPPGPLLSWARLAVHDVHVDKVFVPAGTTAMVNMWAITHDPTIWKNPWTFKPERF 440
EVLR+ PP + R + D P G + DP ++ +P F PERF
Sbjct: 310 EVLRLIPP--VGGGFRELIQDCQFQGFHFPKGWLVSYQISQTHADPDLYPDPEKFDPERF 367
Query: 441 IEEDVPILGSDLRLAPFGSGRRVCPGKALGLATVHLWLARLLHRFRW--LPAEPVDLSET 498
+ PFG G R C GK + L+ RL+ +F W LP + ++L T
Sbjct: 368 TPDGSATHNPPFAHVPFGGGLRECLGKEFARLEMKLFATRLIQQFDWTLLPGQNLELVVT 427
>pdb|2W0A|A Chain A, Cyp51 Of M. Tuberculosis Bound To An Inhibitor
N-[(1s)-2-Methyl-1-(Pyridin-4-Ylcarbamoyl)propyl]
Cyclohexanecarboxamide
Length = 455
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 53/228 (23%), Positives = 99/228 (43%), Gaps = 7/228 (3%)
Query: 290 NNGGNDFLSALLSLPKED---QLSDADTVAILWEMVFRGTDTVAILLEWIMARIVLHQDI 346
+ D L L+++ E + S + + M+F G T + W + ++ H+D
Sbjct: 219 DKSDRDMLDVLIAVKAETGTPRFSADEITGMFISMMFAGHHTSSGTASWTLIELMRHRDA 278
Query: 347 QTKVQNEIDTWVGRDRHVEDSDISSLPYLQAIVKEVLRMHPPGPLLSWARLAVHDVHVDK 406
V +E+D G R V + +P L+ ++KE LR+HP PL+ R+A + V
Sbjct: 279 YAAVIDELDELYGDGRSVSFHALRQIPQLENVLKETLRLHP--PLIILMRVAKGEFEVQG 336
Query: 407 VFVPAGTTAMVNMWAITHDPTIWKNPWTFKPERFIEEDVPILGSDLRLAPFGSGRRVCPG 466
+ G + P + +P F P R+ + L + PFG+GR C G
Sbjct: 337 HRIHEGDLVAASPAISNRIPEDFPDPHDFVPARYEQPRQEDLLNRWTWIPFGAGRHRCVG 396
Query: 467 KALGLATVHLWLARLLHRFRWLPAEPVD--LSETLKLSLEMKKPLTCR 512
A + + + LL + + A+P + ++ K+ +++ +P R
Sbjct: 397 AAFAIMQIKAIFSVLLREYEFEMAQPPESYRNDHSKMVVQLAQPAAVR 444
>pdb|1U13|A Chain A, Crystal Structure Analysis Of The C37lC151TC442A-Triple
Mutant Of Cyp51 From Mycobacterium Tuberculosis
Length = 455
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 53/228 (23%), Positives = 99/228 (43%), Gaps = 7/228 (3%)
Query: 290 NNGGNDFLSALLSLPKED---QLSDADTVAILWEMVFRGTDTVAILLEWIMARIVLHQDI 346
+ D L L+++ E + S + + M+F G T + W + ++ H+D
Sbjct: 219 DKSDRDMLDVLIAVKAETGTPRFSADEITGMFISMMFAGHHTSSGTASWTLIELMRHRDA 278
Query: 347 QTKVQNEIDTWVGRDRHVEDSDISSLPYLQAIVKEVLRMHPPGPLLSWARLAVHDVHVDK 406
V +E+D G R V + +P L+ ++KE LR+HP PL+ R+A + V
Sbjct: 279 YAAVIDELDELYGDGRSVSFHALRQIPQLENVLKETLRLHP--PLIILMRVAKGEFEVQG 336
Query: 407 VFVPAGTTAMVNMWAITHDPTIWKNPWTFKPERFIEEDVPILGSDLRLAPFGSGRRVCPG 466
+ G + P + +P F P R+ + L + PFG+GR C G
Sbjct: 337 HRIHEGDLVAASPAISNRIPEDFPDPHDFVPARYEQPRQEDLLNRWTWIPFGAGRHRCVG 396
Query: 467 KALGLATVHLWLARLLHRFRWLPAEPVD--LSETLKLSLEMKKPLTCR 512
A + + + LL + + A+P + ++ K+ +++ +P R
Sbjct: 397 AAFAIMQIKAIFSVLLREYEFEMAQPPESYRNDHSKMVVQLAQPAAVR 444
>pdb|3EQM|A Chain A, Crystal Structure Of Human Placental Aromatase Cytochrome
P450 In Complex With Androstenedione
pdb|3S79|A Chain A, Human Placental Aromatase Cytochrome P450 (Cyp19a1)
Refined At 2.75 Angstrom
pdb|3S7S|A Chain A, Crystal Structure Of Human Placental Aromatase Complexed
With Breast Cancer Drug Exemestane
pdb|4GL5|A Chain A, Structure Of Human Placental Aromatase Complexed With
Designed Inhibitor Hddg029 (Compound 4)
pdb|4GL7|A Chain A, Structure Of Human Placental Aromatase Complexed With
Designed Inhibitor Hddg046 (Compound 5)
Length = 503
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 97/209 (46%), Gaps = 10/209 (4%)
Query: 278 VVEERKKNSGEFN-NGGNDFLSALLSLPKEDQLSDADTVAILWEMVFRGTDTVAILLEWI 336
+ E+R++ S E DF + L+ K L+ + + EM+ DT+++ L ++
Sbjct: 259 IAEKRRRISTEEKLEECMDFATELILAEKRGDLTRENVNQCILEMLIAAPDTMSVSLFFM 318
Query: 337 MARIVLHQDIQTKVQNEIDTWVGRDRHVEDSDISSLPYLQAIVKEVLRMHPPGPLLSWAR 396
+ I H +++ + EI T +G +R ++ DI L ++ + E +R P L+ R
Sbjct: 319 LFLIAKHPNVEEAIIKEIQTVIG-ERDIKIDDIQKLKVMENFIYESMRYQPVVDLV--MR 375
Query: 397 LAVHDVHVDKVFVPAGTTAMVNMWAITHDPTIWKNPWTFKPERFIEEDVPILGSDLRLAP 456
A+ D +D V GT ++N+ + H + P F E F ++VP P
Sbjct: 376 KALEDDVIDGYPVKKGTNIILNIGRM-HRLEFFPKPNEFTLENF-AKNVPY----RYFQP 429
Query: 457 FGSGRRVCPGKALGLATVHLWLARLLHRF 485
FG G R C GK + + + L LL RF
Sbjct: 430 FGFGPRGCAGKYIAMVMMKAILVTLLRRF 458
>pdb|3L4D|A Chain A, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Leishmania Infantum In Complex With Fluconazole
pdb|3L4D|B Chain B, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Leishmania Infantum In Complex With Fluconazole
pdb|3L4D|C Chain C, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Leishmania Infantum In Complex With Fluconazole
pdb|3L4D|D Chain D, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Leishmania Infantum In Complex With Fluconazole
Length = 453
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/229 (22%), Positives = 99/229 (43%), Gaps = 14/229 (6%)
Query: 263 RCHKLAARVKTLIGQVVEERKKNSGEFNNGGNDFLSALLSLPKED--QLSDADTVAILWE 320
RC A ++ ++ +++ R+K + + +D L+ LL D ++S + ++
Sbjct: 200 RCRDARAELQDILSEIIIAREKEEAQKDTNTSDLLAGLLGAVYRDGTRMSQHEVCGMIVA 259
Query: 321 MVFRGTDTVAILLEWIMARIVLHQDIQ--TKVQNEIDTWVGRDRHVEDSDISSLPYLQAI 378
+F G T I W + ++ ++ + K+ EID + + + D+ + +P+ +
Sbjct: 260 AMFAGQHTSTITTTWSLLHLMDPRNKRHLAKLHQEIDEFPAQLNY--DNVMEEMPFAEQC 317
Query: 379 VKEVLRMHPPGPLLSWARLAVHDVHVDKVFVPAGTTAMVNMWAITHDPTIWKNPWTFKPE 438
+E +R P PL+ R + V V K VP G + D + NP + PE
Sbjct: 318 ARESIRRDP--PLVMLMRKVLKPVQVGKYVVPEGDIIACSPLLSHQDEEAFPNPREWNPE 375
Query: 439 RFIEEDVPILGSDLRLAPFGSGRRVCPGKALGLATVHLWLARLLHRFRW 487
R ++ D FG+G C G+ GL V LA +L + +
Sbjct: 376 RNMKL------VDGAFCGFGAGVHKCIGEKFGLLQVKTVLATVLRDYDF 418
>pdb|3TIK|A Chain A, Sterol 14-Alpha Demethylase (Cyp51) From Trypanosoma
Brucei In Complex With The Tipifarnib Derivative
6-((4-Chlorophenyl)(Methoxy)(1-Methyl-
1h-Imidazol-5-Yl)methyl)-4-(2,
6-Difluorophenyl)-1-Methylquinolin- 2(1h)-One
pdb|3TIK|B Chain B, Sterol 14-Alpha Demethylase (Cyp51) From Trypanosoma
Brucei In Complex With The Tipifarnib Derivative
6-((4-Chlorophenyl)(Methoxy)(1-Methyl-
1h-Imidazol-5-Yl)methyl)-4-(2,
6-Difluorophenyl)-1-Methylquinolin- 2(1h)-One
pdb|3TIK|C Chain C, Sterol 14-Alpha Demethylase (Cyp51) From Trypanosoma
Brucei In Complex With The Tipifarnib Derivative
6-((4-Chlorophenyl)(Methoxy)(1-Methyl-
1h-Imidazol-5-Yl)methyl)-4-(2,
6-Difluorophenyl)-1-Methylquinolin- 2(1h)-One
pdb|3TIK|D Chain D, Sterol 14-Alpha Demethylase (Cyp51) From Trypanosoma
Brucei In Complex With The Tipifarnib Derivative
6-((4-Chlorophenyl)(Methoxy)(1-Methyl-
1h-Imidazol-5-Yl)methyl)-4-(2,
6-Difluorophenyl)-1-Methylquinolin- 2(1h)-One
Length = 454
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 52/229 (22%), Positives = 100/229 (43%), Gaps = 15/229 (6%)
Query: 263 RCHKLAARVKTLIGQVVEERKKNSGEFNNGGNDFLSALLSLPKED--QLSDADTVAILWE 320
RCH+ ++ ++ +++ RK+ ++ +D LS LLS D +S + ++
Sbjct: 201 RCHEARTELQKILSEIIIARKEEEVNKDSSTSDLLSGLLSAVYRDGTPMSLHEVCGMIVA 260
Query: 321 MVFRGTDTVAILLEWIMARIVLHQDIQ--TKVQNEIDTWVGRDRHVEDSDISSLPYLQAI 378
+F G T +I W M ++ +++ ++ EI+ + + + ++ + +P+ +
Sbjct: 261 AMFAGQHTSSITTTWSMLHLMHPANVKHLEALRKEIEEFPAQLNY--NNVMDEMPFAERC 318
Query: 379 VKEVLRMHPPGPLLSWARLAVHDVHVDKVFVPAGTTAMVNMWAITHDPTIWKNPWTFKPE 438
+E +R P PLL R + DV V VP G + HD + P + PE
Sbjct: 319 ARESIRRDP--PLLMLMRKVMADVKVGSYVVPKGDIIACSPLLSHHDEEAFPEPRRWDPE 376
Query: 439 RFIEEDVPILGSDLRLAPFGSGRRVCPGKALGLATVHLWLARLLHRFRW 487
R + + +G FG+G C G+ GL V LA + +
Sbjct: 377 RDEKVEGAFIG-------FGAGVHKCIGQKFGLLQVKTILATAFRSYDF 418
>pdb|3GW9|A Chain A, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei Bound To An Inhibitor N-(1-(2,4-
Dichlorophenyl)-2-(1h-Imidazol-1-Yl)ethyl)-4-(5-Phenyl-
1,3, 4-Oxaziazol-2-Yl)benzamide
pdb|3GW9|B Chain B, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei Bound To An Inhibitor N-(1-(2,4-
Dichlorophenyl)-2-(1h-Imidazol-1-Yl)ethyl)-4-(5-Phenyl-
1,3, 4-Oxaziazol-2-Yl)benzamide
pdb|3GW9|C Chain C, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei Bound To An Inhibitor N-(1-(2,4-
Dichlorophenyl)-2-(1h-Imidazol-1-Yl)ethyl)-4-(5-Phenyl-
1,3, 4-Oxaziazol-2-Yl)benzamide
pdb|3GW9|D Chain D, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei Bound To An Inhibitor N-(1-(2,4-
Dichlorophenyl)-2-(1h-Imidazol-1-Yl)ethyl)-4-(5-Phenyl-
1,3, 4-Oxaziazol-2-Yl)benzamide
Length = 450
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 52/229 (22%), Positives = 100/229 (43%), Gaps = 15/229 (6%)
Query: 263 RCHKLAARVKTLIGQVVEERKKNSGEFNNGGNDFLSALLSLPKED--QLSDADTVAILWE 320
RCH+ ++ ++ +++ RK+ ++ +D LS LLS D +S + ++
Sbjct: 201 RCHEARTELQKILSEIIIARKEEEVNKDSSTSDLLSGLLSAVYRDGTPMSLHEVCGMIVA 260
Query: 321 MVFRGTDTVAILLEWIMARIVLHQDIQ--TKVQNEIDTWVGRDRHVEDSDISSLPYLQAI 378
+F G T +I W M ++ +++ ++ EI+ + + + ++ + +P+ +
Sbjct: 261 AMFAGQHTSSITTTWSMLHLMHPANVKHLEALRKEIEEFPAQLNY--NNVMDEMPFAERC 318
Query: 379 VKEVLRMHPPGPLLSWARLAVHDVHVDKVFVPAGTTAMVNMWAITHDPTIWKNPWTFKPE 438
+E +R P PLL R + DV V VP G + HD + P + PE
Sbjct: 319 ARESIRRDP--PLLMLMRKVMADVKVGSYVVPKGDIIACSPLLSHHDEEAFPEPRRWDPE 376
Query: 439 RFIEEDVPILGSDLRLAPFGSGRRVCPGKALGLATVHLWLARLLHRFRW 487
R + + +G FG+G C G+ GL V LA + +
Sbjct: 377 RDEKVEGAFIG-------FGAGVHKCIGQKFGLLQVKTILATAFRSYDF 418
>pdb|3G1Q|A Chain A, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei In Ligand Free State
pdb|3G1Q|B Chain B, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei In Ligand Free State
pdb|3G1Q|C Chain C, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei In Ligand Free State
pdb|3G1Q|D Chain D, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei In Ligand Free State
Length = 450
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 52/229 (22%), Positives = 100/229 (43%), Gaps = 15/229 (6%)
Query: 263 RCHKLAARVKTLIGQVVEERKKNSGEFNNGGNDFLSALLSLPKED--QLSDADTVAILWE 320
RCH+ ++ ++ +++ RK+ ++ +D LS LLS D +S + ++
Sbjct: 202 RCHEARTELQKILSEIIIARKEEEVNKDSSTSDLLSGLLSAVYRDGTPMSLHEVCGMIVA 261
Query: 321 MVFRGTDTVAILLEWIMARIVLHQDIQ--TKVQNEIDTWVGRDRHVEDSDISSLPYLQAI 378
+F G T +I W M ++ +++ ++ EI+ + + + ++ + +P+ +
Sbjct: 262 AMFAGQHTSSITTTWSMLHLMHPANVKHLEALRKEIEEFPAQLNY--NNVMDEMPFAERC 319
Query: 379 VKEVLRMHPPGPLLSWARLAVHDVHVDKVFVPAGTTAMVNMWAITHDPTIWKNPWTFKPE 438
+E +R P PLL R + DV V VP G + HD + P + PE
Sbjct: 320 ARESIRRDP--PLLMLMRKVMADVKVGSYVVPKGDIIACSPLLSHHDEEAFPEPRRWDPE 377
Query: 439 RFIEEDVPILGSDLRLAPFGSGRRVCPGKALGLATVHLWLARLLHRFRW 487
R + + +G FG+G C G+ GL V LA + +
Sbjct: 378 RDEKVEGAFIG-------FGAGVHKCIGQKFGLLQVKTILATAFRSYDF 419
>pdb|3P99|A Chain A, Sterol 14alpha-Demethylase (Cyp51) From Trypanosoma Brucei
In Complex With
Delta7-14alpha-Methylene-Cyclopropyl-Dihydrolanosterol
pdb|3P99|B Chain B, Sterol 14alpha-Demethylase (Cyp51) From Trypanosoma Brucei
In Complex With
Delta7-14alpha-Methylene-Cyclopropyl-Dihydrolanosterol
pdb|3P99|C Chain C, Sterol 14alpha-Demethylase (Cyp51) From Trypanosoma Brucei
In Complex With
Delta7-14alpha-Methylene-Cyclopropyl-Dihydrolanosterol
pdb|3P99|D Chain D, Sterol 14alpha-Demethylase (Cyp51) From Trypanosoma Brucei
In Complex With
Delta7-14alpha-Methylene-Cyclopropyl-Dihydrolanosterol
Length = 453
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 52/229 (22%), Positives = 100/229 (43%), Gaps = 15/229 (6%)
Query: 263 RCHKLAARVKTLIGQVVEERKKNSGEFNNGGNDFLSALLSLPKED--QLSDADTVAILWE 320
RCH+ ++ ++ +++ RK+ ++ +D LS LLS D +S + ++
Sbjct: 200 RCHEARTELQKILSEIIIARKEEEVNKDSSTSDLLSGLLSAVYRDGTPMSLHEVCGMIVA 259
Query: 321 MVFRGTDTVAILLEWIMARIVLHQDIQ--TKVQNEIDTWVGRDRHVEDSDISSLPYLQAI 378
+F G T +I W M ++ +++ ++ EI+ + + + ++ + +P+ +
Sbjct: 260 AMFAGQHTSSITTTWSMLHLMHPANVKHLEALRKEIEEFPAQLNY--NNVMDEMPFAERC 317
Query: 379 VKEVLRMHPPGPLLSWARLAVHDVHVDKVFVPAGTTAMVNMWAITHDPTIWKNPWTFKPE 438
+E +R P PLL R + DV V VP G + HD + P + PE
Sbjct: 318 ARESIRRDP--PLLMLMRKVMADVKVGSYVVPKGDIIACSPLLSHHDEEAFPEPRRWDPE 375
Query: 439 RFIEEDVPILGSDLRLAPFGSGRRVCPGKALGLATVHLWLARLLHRFRW 487
R + + +G FG+G C G+ GL V LA + +
Sbjct: 376 RDEKVEGAFIG-------FGAGVHKCIGQKFGLLQVKTILATAFRSYDF 417
>pdb|2WV2|A Chain A, X-Ray Structure Of Cyp51 From The Human Pathogen
Trypanosoma Brucei In Complex With Fluconazole
Length = 475
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 52/229 (22%), Positives = 100/229 (43%), Gaps = 15/229 (6%)
Query: 263 RCHKLAARVKTLIGQVVEERKKNSGEFNNGGNDFLSALLSLPKED--QLSDADTVAILWE 320
RCH+ ++ ++ +++ RK+ ++ +D LS LLS D +S + ++
Sbjct: 214 RCHEARTELQKILSEIIIARKEEEVNKDSSTSDLLSGLLSAVYRDGTPMSLHEVCGMIVA 273
Query: 321 MVFRGTDTVAILLEWIMARIVLHQDIQ--TKVQNEIDTWVGRDRHVEDSDISSLPYLQAI 378
+F G T +I W M ++ +++ ++ EI+ + + + ++ + +P+ +
Sbjct: 274 AMFAGQHTSSITTTWSMLHLMHPANVKHLEALRKEIEEFPAQLNY--NNVMDEMPFAERC 331
Query: 379 VKEVLRMHPPGPLLSWARLAVHDVHVDKVFVPAGTTAMVNMWAITHDPTIWKNPWTFKPE 438
+E +R P PLL R + DV V VP G + HD + P + PE
Sbjct: 332 ARESIRRDP--PLLMLMRKVMADVKVGSYVVPKGDIIACSPLLSHHDEEAFPEPRRWDPE 389
Query: 439 RFIEEDVPILGSDLRLAPFGSGRRVCPGKALGLATVHLWLARLLHRFRW 487
R + + +G FG+G C G+ GL V LA + +
Sbjct: 390 RDEKVEGAFIG-------FGAGVHKCIGQKFGLLQVKTILATAFRSYDF 431
>pdb|2X2N|A Chain A, X-Ray Structure Of Cyp51 From Trypanosoma Brucei In
Complex With Posaconazole In Two Different Conformations
pdb|2X2N|B Chain B, X-Ray Structure Of Cyp51 From Trypanosoma Brucei In
Complex With Posaconazole In Two Different Conformations
pdb|2X2N|C Chain C, X-Ray Structure Of Cyp51 From Trypanosoma Brucei In
Complex With Posaconazole In Two Different Conformations
pdb|2X2N|D Chain D, X-Ray Structure Of Cyp51 From Trypanosoma Brucei In
Complex With Posaconazole In Two Different Conformations
Length = 475
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 52/229 (22%), Positives = 100/229 (43%), Gaps = 15/229 (6%)
Query: 263 RCHKLAARVKTLIGQVVEERKKNSGEFNNGGNDFLSALLSLPKED--QLSDADTVAILWE 320
RCH+ ++ ++ +++ RK + ++ +D LS LLS D +S + ++
Sbjct: 214 RCHEARTELQKILSEIIIARKAAAVNKDSSTSDLLSGLLSAVYRDGTPMSLHEVCGMIVA 273
Query: 321 MVFRGTDTVAILLEWIMARIVLHQDIQ--TKVQNEIDTWVGRDRHVEDSDISSLPYLQAI 378
+F G T +I W M ++ +++ ++ EI+ + + + ++ + +P+ +
Sbjct: 274 AMFAGQHTSSITTTWSMLHLMHPANVKHLEALRKEIEEFPAQLNY--NNVMDEMPFAERC 331
Query: 379 VKEVLRMHPPGPLLSWARLAVHDVHVDKVFVPAGTTAMVNMWAITHDPTIWKNPWTFKPE 438
+E +R P PLL R + DV V VP G + HD + P + PE
Sbjct: 332 ARESIRRDP--PLLMLMRKVMADVKVGSYVVPKGDIIACSPLLSHHDEEAFPEPRRWDPE 389
Query: 439 RFIEEDVPILGSDLRLAPFGSGRRVCPGKALGLATVHLWLARLLHRFRW 487
R + + +G FG+G C G+ GL V LA + +
Sbjct: 390 RDEKVEGAFIG-------FGAGVHKCIGQKFGLLQVKTILATAFRSYDF 431
>pdb|4DVQ|A Chain A, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|B Chain B, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|C Chain C, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|D Chain D, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|E Chain E, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|F Chain F, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|G Chain G, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|H Chain H, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|I Chain I, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|J Chain J, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|K Chain K, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|L Chain L, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4FDH|A Chain A, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|B Chain B, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|C Chain C, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|D Chain D, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|E Chain E, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|F Chain F, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|G Chain G, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|H Chain H, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|I Chain I, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|J Chain J, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|K Chain K, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|L Chain L, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
Length = 483
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/148 (25%), Positives = 68/148 (45%), Gaps = 4/148 (2%)
Query: 320 EMVFRGTDTVAILLEWIMARIVLHQDIQTKVQNEIDTWVGRDRHVEDSDISSLPYLQAIV 379
E+ DT A L + + + D+Q ++ E + LP L+A +
Sbjct: 284 ELTAGSVDTTAFPLLMTLFELARNPDVQQILRQESLAAAASISEHPQKATTELPLLRAAL 343
Query: 380 KEVLRMHPPGPLLSWARLAVHDVHVDKVFVPAGTTAMVNMWAITHDPTIWKNPWTFKPER 439
KE LR++P G L R+ D+ + +PAGT V ++++ + ++ P + P+R
Sbjct: 344 KETLRLYPVGLFLE--RVVSSDLVLQNYHIPAGTLVQVFLYSLGRNAALFPRPERYNPQR 401
Query: 440 FIEEDVPILGSDLRLAPFGSGRRVCPGK 467
++ D+ G + PFG G R C G+
Sbjct: 402 WL--DIRGSGRNFHHVPFGFGMRQCLGR 427
>pdb|3CBD|A Chain A, Directed Evolution Of Cytochrome P450 Bm3, To Octane
Monoxygenase 139-3
pdb|3CBD|B Chain B, Directed Evolution Of Cytochrome P450 Bm3, To Octane
Monoxygenase 139-3
Length = 455
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 64/257 (24%), Positives = 109/257 (42%), Gaps = 23/257 (8%)
Query: 261 KRRCHKLAARVKTLIGQVVEERKKNSGEFNNGGNDFLSALLSLPKEDQ---LSDADTVAI 317
KR+ + + L+ +++ +RK SGE +D L+ +L+ + L D +
Sbjct: 202 KRQFQEDIKVMNDLVDKIIADRKA-SGE---QSDDLLTQMLNGKDPETGEPLDDGNISYQ 257
Query: 318 LWEMVFRGTDTVAILLEWIMARIVLHQDIQTKVQNEIDTWVGRDRHVEDSDISSLPYLQA 377
+ + G +T + LL + + +V + + KV E T V D + L Y+
Sbjct: 258 IITFLIAGHETTSGLLSFALYFLVKNPHVLQKVAEEA-TRVLVDPVPSYKQVKQLKYVGM 316
Query: 378 IVKEVLRMHPPGPLLSWARLAVHDVHVDKVF-VPAGTTAMVNMWAITHDPTIWKNP-WTF 435
++ E LR+ P P S A D + + + G MV + + D TIW + F
Sbjct: 317 VLNEALRLWPTAPAFSL--YAKEDTVLGGEYPLEKGDEVMVLIPQLHRDKTIWGDDVEEF 374
Query: 436 KPERFIEEDVPILGSDLRLAPFGSGRRVCPGKALGLATVHLWLARLLHRFRWLPAEPVDL 495
+PERF + P PFG+G+R C G+ L L L +L F D
Sbjct: 375 RPERF---ENPSAIPQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHF--------DF 423
Query: 496 SETLKLSLEMKKPLTCR 512
+ L++K+ LT +
Sbjct: 424 EDHTNYELDIKETLTLK 440
>pdb|3HF2|A Chain A, Crystal Structure Of The I401p Mutant Of Cytochrome P450
Bm3
pdb|3HF2|B Chain B, Crystal Structure Of The I401p Mutant Of Cytochrome P450
Bm3
Length = 482
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 63/257 (24%), Positives = 109/257 (42%), Gaps = 23/257 (8%)
Query: 261 KRRCHKLAARVKTLIGQVVEERKKNSGEFNNGGNDFLSALLSLPKEDQLSDADTVAILWE 320
KR+ + + L+ +++ +RK SGE +D L+ +L+ + D I ++
Sbjct: 203 KRQFQEDIKVMNDLVDKIIADRKA-SGE---QSDDLLTHMLNGKDPETGEPLDDENIRYQ 258
Query: 321 MV---FRGTDTVAILLEWIMARIVLHQDIQTKVQNEIDTWVGRDRHVEDSDISSLPYLQA 377
++ G +T + LL + + +V + + K E V D + L Y+
Sbjct: 259 IITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEA-ARVLVDPVPSYKQVKQLKYVGM 317
Query: 378 IVKEVLRMHPPGPLLSWARLAVHDVHVDKVF-VPAGTTAMVNMWAITHDPTIWKNP-WTF 435
++ E LR+ P P S A D + + + G MV + + D TIW + F
Sbjct: 318 VLNEALRLWPTAPAFSL--YAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEF 375
Query: 436 KPERFIEEDVPILGSDLRLAPFGSGRRVCPGKALGLATVHLWLARLLHRFRWLPAEPVDL 495
+PERF + P PFG+G+R CPG+ L L L +L F D
Sbjct: 376 RPERF---ENPSAIPQHAFKPFGNGQRACPGQQFALHEATLVLGMMLKHF--------DF 424
Query: 496 SETLKLSLEMKKPLTCR 512
+ L++K+ LT +
Sbjct: 425 EDHTNYELDIKETLTLK 441
>pdb|3LD6|A Chain A, Crystal Structure Of Human Lanosterol 14alpha-Demethylase
(C Complex With Ketoconazole
pdb|3LD6|B Chain B, Crystal Structure Of Human Lanosterol 14alpha-Demethylase
(C Complex With Ketoconazole
pdb|3JUS|A Chain A, Crystal Structure Of Human Lanosterol 14alpha-Demethylase
(Cyp51) In Complex With Econazole
pdb|3JUS|B Chain B, Crystal Structure Of Human Lanosterol 14alpha-Demethylase
(Cyp51) In Complex With Econazole
pdb|3JUV|A Chain A, Crystal Structure Of Human Lanosterol 14alpha-Demethylase
(C
Length = 461
Score = 58.5 bits (140), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 50/229 (21%), Positives = 93/229 (40%), Gaps = 10/229 (4%)
Query: 262 RRCHKLAARVKTLIGQVVEERKKNSGEFNNGGNDFLSALLSLPKED--QLSDADTVAILW 319
RR + +K + + +++R+++ + + D L LL +D L+D + +L
Sbjct: 203 RRRDRAHREIKDIFYKAIQKRRQSQEKID----DILQTLLDATYKDGRPLTDDEVAGMLI 258
Query: 320 EMVFRGTDTVAILLEWIMARIVLHQDIQTKVQNEIDTWVGRDRHVEDSD-ISSLPYLQAI 378
++ G T + W+ + + +Q K E T G + D + L L
Sbjct: 259 GLLLAGQHTSSTTSAWMGFFLARDKTLQKKCYLEQKTVCGENLPPLTYDQLKDLNLLDRC 318
Query: 379 VKEVLRMHPPGPLLSWARLAVHDVHVDKVFVPAGTTAMVNMWAITHDPTIWKNPWTFKPE 438
+KE LR+ PP ++ R+A V +P G V+ W F P+
Sbjct: 319 IKETLRLRPP--IMIMMRMARTPQTVAGYTIPPGHQVCVSPTVNQRLKDSWVERLDFNPD 376
Query: 439 RFIEEDVPILGSDLRLAPFGSGRRVCPGKALGLATVHLWLARLLHRFRW 487
R+++ D P G PFG+GR C G+ + + +L + +
Sbjct: 377 RYLQ-DNPASGEKFAYVPFGAGRHRCIGENFAYVQIKTIWSTMLRLYEF 424
>pdb|1IZO|A Chain A, Cytochrome P450 Bs Beta Complexed With Fatty Acid
pdb|1IZO|B Chain B, Cytochrome P450 Bs Beta Complexed With Fatty Acid
pdb|1IZO|C Chain C, Cytochrome P450 Bs Beta Complexed With Fatty Acid
pdb|2ZQX|A Chain A, Cytochrome P450bsbeta Cocrystallized With Heptanoic Acid
pdb|2ZQX|B Chain B, Cytochrome P450bsbeta Cocrystallized With Heptanoic Acid
pdb|2ZQX|C Chain C, Cytochrome P450bsbeta Cocrystallized With Heptanoic Acid
pdb|2ZQJ|A Chain A, Substrate-Free Form Of Cytochrome P450bsbeta
pdb|2ZQJ|B Chain B, Substrate-Free Form Of Cytochrome P450bsbeta
pdb|2ZQJ|C Chain C, Substrate-Free Form Of Cytochrome P450bsbeta
Length = 417
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/116 (27%), Positives = 55/116 (47%), Gaps = 10/116 (8%)
Query: 376 QAIVKEVLRMHPPGPLLSWARLAVHDVHVDKVFVPAGTTAMVNMWAITHDPTIWKNPWTF 435
+ V+EV R +P GP L L D + GT+ +++++ HDP +W +P F
Sbjct: 277 EMFVQEVRRYYPFGPFL--GALVKKDFVWNNCEFKKGTSVLLDLYGTNHDPRLWDHPDEF 334
Query: 436 KPERFIEEDVPILGSDLRLAPFGSGR----RVCPGKALGLATVHLWLARLLHRFRW 487
+PERF E + + + P G G CPG+ + + + L L+H+ +
Sbjct: 335 RPERFAEREENLFD----MIPQGGGHAEKGHRCPGEGITIEVMKASLDFLVHQIEY 386
>pdb|2IJ4|A Chain A, Structure Of The A264k Mutant Of Cytochrome P450 Bm3
pdb|2IJ4|B Chain B, Structure Of The A264k Mutant Of Cytochrome P450 Bm3
Length = 470
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 62/257 (24%), Positives = 109/257 (42%), Gaps = 23/257 (8%)
Query: 261 KRRCHKLAARVKTLIGQVVEERKKNSGEFNNGGNDFLSALLSLPKEDQLSDADTVAILWE 320
KR+ + + L+ +++ +RK SGE +D L+ +L+ + D I ++
Sbjct: 202 KRQFQEDIKVMNDLVDKIIADRKA-SGE---QSDDLLTHMLNGKDPETGEPLDDENIRYQ 257
Query: 321 MV---FRGTDTVAILLEWIMARIVLHQDIQTKVQNEIDTWVGRDRHVEDSDISSLPYLQA 377
++ +G +T + LL + + +V + + K E V D + L Y+
Sbjct: 258 IITFLIKGHETTSGLLSFALYFLVKNPHVLQKAAEEA-ARVLVDPVPSYKQVKQLKYVGM 316
Query: 378 IVKEVLRMHPPGPLLSWARLAVHDVHVDKVF-VPAGTTAMVNMWAITHDPTIWKNP-WTF 435
++ E LR+ P P S A D + + + G MV + + D TIW + F
Sbjct: 317 VLNEALRLWPTAPAFSL--YAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEF 374
Query: 436 KPERFIEEDVPILGSDLRLAPFGSGRRVCPGKALGLATVHLWLARLLHRFRWLPAEPVDL 495
+PERF + P PFG+G+R C G+ L L L +L F D
Sbjct: 375 RPERF---ENPSAIPQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHF--------DF 423
Query: 496 SETLKLSLEMKKPLTCR 512
+ L++K+ LT +
Sbjct: 424 EDHTNYELDIKETLTLK 440
>pdb|2NNB|A Chain A, The Q403k Mutnat Heme Domain Of Flavocytochrome P450 Bm3
pdb|2NNB|B Chain B, The Q403k Mutnat Heme Domain Of Flavocytochrome P450 Bm3
Length = 471
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 63/257 (24%), Positives = 108/257 (42%), Gaps = 23/257 (8%)
Query: 261 KRRCHKLAARVKTLIGQVVEERKKNSGEFNNGGNDFLSALLSLPKEDQLSDADTVAILWE 320
KR+ + + L+ +++ +RK SGE +D L+ +L+ + D I ++
Sbjct: 202 KRQFQEDIKVMNDLVDKIIADRKA-SGE---QSDDLLTHMLNGKDPETGEPLDDENIRYQ 257
Query: 321 MV---FRGTDTVAILLEWIMARIVLHQDIQTKVQNEIDTWVGRDRHVEDSDISSLPYLQA 377
++ G +T + LL + + +V + + K E V D + L Y+
Sbjct: 258 IITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEA-ARVLVDPVPSYKQVKQLKYVGM 316
Query: 378 IVKEVLRMHPPGPLLSWARLAVHDVHVDKVF-VPAGTTAMVNMWAITHDPTIWKNP-WTF 435
++ E LR+ P P S A D + + + G MV + + D TIW + F
Sbjct: 317 VLNEALRLWPTAPAFSL--YAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEF 374
Query: 436 KPERFIEEDVPILGSDLRLAPFGSGRRVCPGKALGLATVHLWLARLLHRFRWLPAEPVDL 495
+PERF + P PFG+G+R C GK L L L +L F D
Sbjct: 375 RPERF---ENPSAIPQHAFKPFGNGQRACIGKQFALHEATLVLGMMLKHF--------DF 423
Query: 496 SETLKLSLEMKKPLTCR 512
+ L++K+ LT +
Sbjct: 424 EDHTNYELDIKETLTLK 440
>pdb|3EKF|A Chain A, Crystal Structure Of The A264q Heme Domain Of Cytochrome
P450 Bm3
pdb|3EKF|B Chain B, Crystal Structure Of The A264q Heme Domain Of Cytochrome
P450 Bm3
Length = 470
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 62/257 (24%), Positives = 109/257 (42%), Gaps = 23/257 (8%)
Query: 261 KRRCHKLAARVKTLIGQVVEERKKNSGEFNNGGNDFLSALLSLPKEDQLSDADTVAILWE 320
KR+ + + L+ +++ +RK SGE +D L+ +L+ + D I ++
Sbjct: 202 KRQFQEDIKVMNDLVDKIIADRKA-SGE---QSDDLLTHMLNGKDPETGEPLDDENIRYQ 257
Query: 321 MV---FRGTDTVAILLEWIMARIVLHQDIQTKVQNEIDTWVGRDRHVEDSDISSLPYLQA 377
++ +G +T + LL + + +V + + K E V D + L Y+
Sbjct: 258 IITFLIQGHETTSGLLSFALYFLVKNPHVLQKAAEEA-ARVLVDPVPSYKQVKQLKYVGM 316
Query: 378 IVKEVLRMHPPGPLLSWARLAVHDVHVDKVF-VPAGTTAMVNMWAITHDPTIWKNP-WTF 435
++ E LR+ P P S A D + + + G MV + + D TIW + F
Sbjct: 317 VLNEALRLWPTAPAFSL--YAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEF 374
Query: 436 KPERFIEEDVPILGSDLRLAPFGSGRRVCPGKALGLATVHLWLARLLHRFRWLPAEPVDL 495
+PERF + P PFG+G+R C G+ L L L +L F D
Sbjct: 375 RPERF---ENPSAIPQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHF--------DF 423
Query: 496 SETLKLSLEMKKPLTCR 512
+ L++K+ LT +
Sbjct: 424 EDHTNYELDIKETLTLK 440
>pdb|3KX4|A Chain A, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
pdb|3KX4|B Chain B, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
Length = 470
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 62/257 (24%), Positives = 108/257 (42%), Gaps = 23/257 (8%)
Query: 261 KRRCHKLAARVKTLIGQVVEERKKNSGEFNNGGNDFLSALLSLPKEDQLSDADTVAILWE 320
KR+ + + L+ +++ +RK SGE +D L+ +L+ + D I ++
Sbjct: 202 KRQFQEDIKVMNDLVDKIIADRKA-SGE---QSDDLLTHMLNGKDPETGEPLDDENIRYQ 257
Query: 321 MV---FRGTDTVAILLEWIMARIVLHQDIQTKVQNEIDTWVGRDRHVEDSDISSLPYLQA 377
++ G +T + LL + + +V + + K E V D + L Y+
Sbjct: 258 IITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEA-ARVLVDPVPSYKQVKQLKYVGM 316
Query: 378 IVKEVLRMHPPGPLLSWARLAVHDVHVDKVF-VPAGTTAMVNMWAITHDPTIWKNP-WTF 435
++ E LR+ P P S A D + + + G MV + + D TIW + F
Sbjct: 317 VLNEALRLWPTAPAFSL--YAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEF 374
Query: 436 KPERFIEEDVPILGSDLRLAPFGSGRRVCPGKALGLATVHLWLARLLHRFRWLPAEPVDL 495
+PERF + P PFG+G+R C G+ L L L +L F D
Sbjct: 375 RPERF---ENPSAIPQHAFKPFGNGQRACEGQQFALHEATLVLGMMLKHF--------DF 423
Query: 496 SETLKLSLEMKKPLTCR 512
+ L++K+ LT +
Sbjct: 424 EDHTNYELDIKETLTLK 440
>pdb|1SMI|A Chain A, A Single Mutation Of P450 Bm3 Induces The Conformational
Rearrangement Seen Upon Substrate-Binding In Wild-Type
Enzyme
pdb|1SMI|B Chain B, A Single Mutation Of P450 Bm3 Induces The Conformational
Rearrangement Seen Upon Substrate-Binding In Wild-Type
Enzyme
pdb|1SMJ|A Chain A, Structure Of The A264e Mutant Of Cytochrome P450 Bm3
Complexed With Palmitoleate
pdb|1SMJ|B Chain B, Structure Of The A264e Mutant Of Cytochrome P450 Bm3
Complexed With Palmitoleate
pdb|1SMJ|C Chain C, Structure Of The A264e Mutant Of Cytochrome P450 Bm3
Complexed With Palmitoleate
pdb|1SMJ|D Chain D, Structure Of The A264e Mutant Of Cytochrome P450 Bm3
Complexed With Palmitoleate
Length = 471
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 62/257 (24%), Positives = 108/257 (42%), Gaps = 23/257 (8%)
Query: 261 KRRCHKLAARVKTLIGQVVEERKKNSGEFNNGGNDFLSALLSLPKEDQLSDADTVAILWE 320
KR+ + + L+ +++ +RK SGE +D L+ +L+ + D I ++
Sbjct: 202 KRQFQEDIKVMNDLVDKIIADRKA-SGE---QSDDLLTHMLNGKDPETGEPLDDENIRYQ 257
Query: 321 MV---FRGTDTVAILLEWIMARIVLHQDIQTKVQNEIDTWVGRDRHVEDSDISSLPYLQA 377
++ G +T + LL + + +V + + K E V D + L Y+
Sbjct: 258 IITFLIEGHETTSGLLSFALYFLVKNPHVLQKAAEEA-ARVLVDPVPSYKQVKQLKYVGM 316
Query: 378 IVKEVLRMHPPGPLLSWARLAVHDVHVDKVF-VPAGTTAMVNMWAITHDPTIWKNP-WTF 435
++ E LR+ P P S A D + + + G MV + + D TIW + F
Sbjct: 317 VLNEALRLWPTAPAFSL--YAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEF 374
Query: 436 KPERFIEEDVPILGSDLRLAPFGSGRRVCPGKALGLATVHLWLARLLHRFRWLPAEPVDL 495
+PERF + P PFG+G+R C G+ L L L +L F D
Sbjct: 375 RPERF---ENPSAIPQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHF--------DF 423
Query: 496 SETLKLSLEMKKPLTCR 512
+ L++K+ LT +
Sbjct: 424 EDHTNYELDIKETLTLK 440
>pdb|2IJ3|A Chain A, Structure Of The A264h Mutant Of Cytochrome P450 Bm3
pdb|2IJ3|B Chain B, Structure Of The A264h Mutant Of Cytochrome P450 Bm3
Length = 470
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 62/257 (24%), Positives = 108/257 (42%), Gaps = 23/257 (8%)
Query: 261 KRRCHKLAARVKTLIGQVVEERKKNSGEFNNGGNDFLSALLSLPKEDQLSDADTVAILWE 320
KR+ + + L+ +++ +RK SGE +D L+ +L+ + D I ++
Sbjct: 202 KRQFQEDIKVMNDLVDKIIADRKA-SGE---QSDDLLTHMLNGKDPETGEPLDDENIRYQ 257
Query: 321 MV---FRGTDTVAILLEWIMARIVLHQDIQTKVQNEIDTWVGRDRHVEDSDISSLPYLQA 377
++ G +T + LL + + +V + + K E V D + L Y+
Sbjct: 258 IITFLIHGHETTSGLLSFALYFLVKNPHVLQKAAEEA-ARVLVDPVPSYKQVKQLKYVGM 316
Query: 378 IVKEVLRMHPPGPLLSWARLAVHDVHVDKVF-VPAGTTAMVNMWAITHDPTIWKNP-WTF 435
++ E LR+ P P S A D + + + G MV + + D TIW + F
Sbjct: 317 VLNEALRLWPTAPAFSL--YAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEF 374
Query: 436 KPERFIEEDVPILGSDLRLAPFGSGRRVCPGKALGLATVHLWLARLLHRFRWLPAEPVDL 495
+PERF + P PFG+G+R C G+ L L L +L F D
Sbjct: 375 RPERF---ENPSAIPQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHF--------DF 423
Query: 496 SETLKLSLEMKKPLTCR 512
+ L++K+ LT +
Sbjct: 424 EDHTNYELDIKETLTLK 440
>pdb|3PSX|A Chain A, Crystal Structure Of The Kt2 Mutant Of Cytochrome P450 Bm3
pdb|3PSX|B Chain B, Crystal Structure Of The Kt2 Mutant Of Cytochrome P450 Bm3
Length = 487
Score = 55.1 bits (131), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 63/257 (24%), Positives = 107/257 (41%), Gaps = 23/257 (8%)
Query: 261 KRRCHKLAARVKTLIGQVVEERKKNSGEFNNGGNDFLSALLSLPKEDQLSDADTVAILWE 320
KR+ + + L+ +++ +RK SGE +D L+ +L + D I ++
Sbjct: 208 KRQFQEDIKVMNDLVDKIIADRKA-SGE---QSDDLLTHMLHGKDPETGEPLDDENIRYQ 263
Query: 321 MV---FRGTDTVAILLEWIMARIVLHQDIQTKVQNEIDTWVGRDRHVEDSDISSLPYLQA 377
+V G +T + LL + + +V + + K E V D + L Y+
Sbjct: 264 IVTFLIAGHETTSGLLSFTLYFLVKNPHVLQKAAEEA-ARVLVDPVPSYKQVKQLKYVGM 322
Query: 378 IVKEVLRMHPPGPLLSWARLAVHDVHVDKVF-VPAGTTAMVNMWAITHDPTIWKNP-WTF 435
++ E LR+ P P S A D + + + G MV + + D TIW + F
Sbjct: 323 VLNEALRLWPTAPAFSL--YAKEDTVLGGEYPLEKGDEIMVLIPQLHRDKTIWGDDVEEF 380
Query: 436 KPERFIEEDVPILGSDLRLAPFGSGRRVCPGKALGLATVHLWLARLLHRFRWLPAEPVDL 495
+PERF + P PFG+G+R C G+ L L L +L F D
Sbjct: 381 RPERF---ENPSAIPQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHF--------DF 429
Query: 496 SETLKLSLEMKKPLTCR 512
+ L++K+ LT +
Sbjct: 430 EDHTNYELDIKETLTLK 446
>pdb|1BVY|A Chain A, Complex Of The Heme And Fmn-Binding Domains Of The
Cytochrome P450(Bm-3)
pdb|1BVY|B Chain B, Complex Of The Heme And Fmn-Binding Domains Of The
Cytochrome P450(Bm-3)
Length = 458
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 62/257 (24%), Positives = 108/257 (42%), Gaps = 23/257 (8%)
Query: 261 KRRCHKLAARVKTLIGQVVEERKKNSGEFNNGGNDFLSALLSLPKEDQLSDADTVAILWE 320
KR+ + + L+ +++ +RK SGE +D L+ +L+ + D I ++
Sbjct: 202 KRQFQEDIKVMNDLVDKIIADRKA-SGE---QSDDLLTHMLNGKDPETGEPLDDENIRYQ 257
Query: 321 MV---FRGTDTVAILLEWIMARIVLHQDIQTKVQNEIDTWVGRDRHVEDSDISSLPYLQA 377
++ G +T + LL + + +V + + K E V D + L Y+
Sbjct: 258 IITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEA-ARVLVDPVPSYKQVKQLKYVGM 316
Query: 378 IVKEVLRMHPPGPLLSWARLAVHDVHVDKVF-VPAGTTAMVNMWAITHDPTIWKNP-WTF 435
++ E LR+ P P S A D + + + G MV + + D TIW + F
Sbjct: 317 VLNEALRLWPTAPAFSL--YAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEF 374
Query: 436 KPERFIEEDVPILGSDLRLAPFGSGRRVCPGKALGLATVHLWLARLLHRFRWLPAEPVDL 495
+PERF + P PFG+G+R C G+ L L L +L F D
Sbjct: 375 RPERF---ENPSAIPQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHF--------DF 423
Query: 496 SETLKLSLEMKKPLTCR 512
+ L++K+ LT +
Sbjct: 424 EDHTNYELDIKETLTLK 440
>pdb|1JPZ|A Chain A, Crystal Structure Of A Complex Of The Heme Domain Of
P450bm- 3 With N-Palmitoylglycine
pdb|1JPZ|B Chain B, Crystal Structure Of A Complex Of The Heme Domain Of
P450bm- 3 With N-Palmitoylglycine
pdb|1ZO9|A Chain A, Crystal Structure Of The Wild Type Heme Domain Of P450bm-3
With N- Palmitoylmethionine
pdb|1ZO9|B Chain B, Crystal Structure Of The Wild Type Heme Domain Of P450bm-3
With N- Palmitoylmethionine
Length = 473
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 62/257 (24%), Positives = 108/257 (42%), Gaps = 23/257 (8%)
Query: 261 KRRCHKLAARVKTLIGQVVEERKKNSGEFNNGGNDFLSALLSLPKEDQLSDADTVAILWE 320
KR+ + + L+ +++ +RK SGE +D L+ +L+ + D I ++
Sbjct: 205 KRQFQEDIKVMNDLVDKIIADRKA-SGE---QSDDLLTHMLNGKDPETGEPLDDENIRYQ 260
Query: 321 MV---FRGTDTVAILLEWIMARIVLHQDIQTKVQNEIDTWVGRDRHVEDSDISSLPYLQA 377
++ G +T + LL + + +V + + K E V D + L Y+
Sbjct: 261 IITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEA-ARVLVDPVPSYKQVKQLKYVGM 319
Query: 378 IVKEVLRMHPPGPLLSWARLAVHDVHVDKVF-VPAGTTAMVNMWAITHDPTIWKNP-WTF 435
++ E LR+ P P S A D + + + G MV + + D TIW + F
Sbjct: 320 VLNEALRLWPTAPAFSL--YAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEF 377
Query: 436 KPERFIEEDVPILGSDLRLAPFGSGRRVCPGKALGLATVHLWLARLLHRFRWLPAEPVDL 495
+PERF + P PFG+G+R C G+ L L L +L F D
Sbjct: 378 RPERF---ENPSAIPQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHF--------DF 426
Query: 496 SETLKLSLEMKKPLTCR 512
+ L++K+ LT +
Sbjct: 427 EDHTNYELDIKETLTLK 443
>pdb|3NPL|A Chain A, Structure Of Ru(Bpy)2(A-Phen)(K97c) P450 Bm3 Heme Domain,
A Ruthenium Modified P450 Bm3 Mutant
pdb|3NPL|B Chain B, Structure Of Ru(Bpy)2(A-Phen)(K97c) P450 Bm3 Heme Domain,
A Ruthenium Modified P450 Bm3 Mutant
Length = 470
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 62/257 (24%), Positives = 108/257 (42%), Gaps = 23/257 (8%)
Query: 261 KRRCHKLAARVKTLIGQVVEERKKNSGEFNNGGNDFLSALLSLPKEDQLSDADTVAILWE 320
KR+ + + L+ +++ +RK SGE +D L+ +L+ + D I ++
Sbjct: 203 KRQFQEDIKVMNDLVDKIIADRKA-SGE---QSDDLLTHMLNGKDPETGEPLDDENIRYQ 258
Query: 321 MV---FRGTDTVAILLEWIMARIVLHQDIQTKVQNEIDTWVGRDRHVEDSDISSLPYLQA 377
++ G +T + LL + + +V + + K E V D + L Y+
Sbjct: 259 IITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEA-ARVLVDPVPSYKQVKQLKYVGM 317
Query: 378 IVKEVLRMHPPGPLLSWARLAVHDVHVDKVF-VPAGTTAMVNMWAITHDPTIWKNP-WTF 435
++ E LR+ P P S A D + + + G MV + + D TIW + F
Sbjct: 318 VLNEALRLWPTAPAFSL--YAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEF 375
Query: 436 KPERFIEEDVPILGSDLRLAPFGSGRRVCPGKALGLATVHLWLARLLHRFRWLPAEPVDL 495
+PERF + P PFG+G+R C G+ L L L +L F D
Sbjct: 376 RPERF---ENPSAIPQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHF--------DF 424
Query: 496 SETLKLSLEMKKPLTCR 512
+ L++K+ LT +
Sbjct: 425 EDHTNYELDIKETLTLK 441
>pdb|2UWH|A Chain A, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
pdb|2UWH|B Chain B, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
pdb|2UWH|C Chain C, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
pdb|2UWH|D Chain D, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
pdb|2UWH|E Chain E, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
pdb|2UWH|F Chain F, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
Length = 458
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 62/257 (24%), Positives = 108/257 (42%), Gaps = 23/257 (8%)
Query: 261 KRRCHKLAARVKTLIGQVVEERKKNSGEFNNGGNDFLSALLSLPKEDQLSDADTVAILWE 320
KR+ + + L+ +++ +RK SGE +D L+ +L+ + D I ++
Sbjct: 202 KRQFQEDIKVMNDLVDKIIADRKA-SGE---QSDDLLTHMLNGKDPETGEPLDDENIRYQ 257
Query: 321 MV---FRGTDTVAILLEWIMARIVLHQDIQTKVQNEIDTWVGRDRHVEDSDISSLPYLQA 377
++ G +T + LL + + +V + + K E V D + L Y+
Sbjct: 258 IITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEA-ARVLVDPVPSYKQVKQLKYVGM 316
Query: 378 IVKEVLRMHPPGPLLSWARLAVHDVHVDKVF-VPAGTTAMVNMWAITHDPTIWKNP-WTF 435
++ E LR+ P P S A D + + + G MV + + D TIW + F
Sbjct: 317 VLNEALRLWPTAPAFSL--YAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEF 374
Query: 436 KPERFIEEDVPILGSDLRLAPFGSGRRVCPGKALGLATVHLWLARLLHRFRWLPAEPVDL 495
+PERF + P PFG+G+R C G+ L L L +L F D
Sbjct: 375 RPERF---ENPSAIPQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHF--------DF 423
Query: 496 SETLKLSLEMKKPLTCR 512
+ L++K+ LT +
Sbjct: 424 EDHTNYELDIKETLTLK 440
>pdb|3KX3|A Chain A, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
pdb|3KX3|B Chain B, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
Length = 470
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 62/257 (24%), Positives = 108/257 (42%), Gaps = 23/257 (8%)
Query: 261 KRRCHKLAARVKTLIGQVVEERKKNSGEFNNGGNDFLSALLSLPKEDQLSDADTVAILWE 320
KR+ + + L+ +++ +RK SGE +D L+ +L+ + D I ++
Sbjct: 202 KRQFQEDIKVMNDLVDKIIADRKA-SGE---QSDDLLTHMLNGKDPETGEPLDDENIRYQ 257
Query: 321 MV---FRGTDTVAILLEWIMARIVLHQDIQTKVQNEIDTWVGRDRHVEDSDISSLPYLQA 377
++ G +T + LL + + +V + + K E V D + L Y+
Sbjct: 258 IITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEA-ARVLVDPVPSYKQVKQLKYVGM 316
Query: 378 IVKEVLRMHPPGPLLSWARLAVHDVHVDKVF-VPAGTTAMVNMWAITHDPTIWKNP-WTF 435
++ E LR+ P P S A D + + + G MV + + D TIW + F
Sbjct: 317 VLNEALRLWPTAPAFSL--YAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEF 374
Query: 436 KPERFIEEDVPILGSDLRLAPFGSGRRVCPGKALGLATVHLWLARLLHRFRWLPAEPVDL 495
+PERF + P PFG+G+R C G+ L L L +L F D
Sbjct: 375 RPERF---ENPSAIPQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHF--------DF 423
Query: 496 SETLKLSLEMKKPLTCR 512
+ L++K+ LT +
Sbjct: 424 EDHTNYELDIKETLTLK 440
>pdb|3KX5|A Chain A, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
pdb|3KX5|B Chain B, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
Length = 470
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 62/257 (24%), Positives = 108/257 (42%), Gaps = 23/257 (8%)
Query: 261 KRRCHKLAARVKTLIGQVVEERKKNSGEFNNGGNDFLSALLSLPKEDQLSDADTVAILWE 320
KR+ + + L+ +++ +RK SGE +D L+ +L+ + D I ++
Sbjct: 202 KRQFQEDIKVMNDLVDKIIADRKA-SGE---QSDDLLTHMLNGKDPETGEPLDDENIRYQ 257
Query: 321 MV---FRGTDTVAILLEWIMARIVLHQDIQTKVQNEIDTWVGRDRHVEDSDISSLPYLQA 377
++ G +T + LL + + +V + + K E V D + L Y+
Sbjct: 258 IITELIAGHETTSGLLSFALYFLVKNPHVLQKAAEEA-ARVLVDPVPSYKQVKQLKYVGM 316
Query: 378 IVKEVLRMHPPGPLLSWARLAVHDVHVDKVF-VPAGTTAMVNMWAITHDPTIWKNP-WTF 435
++ E LR+ P P S A D + + + G MV + + D TIW + F
Sbjct: 317 VLNEALRLWPTAPAFSL--YAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEF 374
Query: 436 KPERFIEEDVPILGSDLRLAPFGSGRRVCPGKALGLATVHLWLARLLHRFRWLPAEPVDL 495
+PERF + P PFG+G+R C G+ L L L +L F D
Sbjct: 375 RPERF---ENPSAIPQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHF--------DF 423
Query: 496 SETLKLSLEMKKPLTCR 512
+ L++K+ LT +
Sbjct: 424 EDHTNYELDIKETLTLK 440
>pdb|3BEN|A Chain A, Structure Of N-(12-Imidazolyl-Dodecanoyl)-L-Leucine
Inhibitor Bound To The Heme Domain Of Cytochrome
P450-Bm3
pdb|3BEN|B Chain B, Structure Of N-(12-Imidazolyl-Dodecanoyl)-L-Leucine
Inhibitor Bound To The Heme Domain Of Cytochrome
P450-Bm3
Length = 470
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 62/257 (24%), Positives = 108/257 (42%), Gaps = 23/257 (8%)
Query: 261 KRRCHKLAARVKTLIGQVVEERKKNSGEFNNGGNDFLSALLSLPKEDQLSDADTVAILWE 320
KR+ + + L+ +++ +RK SGE +D L+ +L+ + D I ++
Sbjct: 203 KRQFQEDIKVMNDLVDKIIADRKA-SGE---QSDDLLTHMLNGKDPETGEPLDDENIRYQ 258
Query: 321 MV---FRGTDTVAILLEWIMARIVLHQDIQTKVQNEIDTWVGRDRHVEDSDISSLPYLQA 377
++ G +T + LL + + +V + + K E V D + L Y+
Sbjct: 259 IITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEA-ARVLVDPVPSYKQVKQLKYVGM 317
Query: 378 IVKEVLRMHPPGPLLSWARLAVHDVHVDKVF-VPAGTTAMVNMWAITHDPTIWKNP-WTF 435
++ E LR+ P P S A D + + + G MV + + D TIW + F
Sbjct: 318 VLNEALRLWPTAPAFSL--YAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEF 375
Query: 436 KPERFIEEDVPILGSDLRLAPFGSGRRVCPGKALGLATVHLWLARLLHRFRWLPAEPVDL 495
+PERF + P PFG+G+R C G+ L L L +L F D
Sbjct: 376 RPERF---ENPSAIPQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHF--------DF 424
Query: 496 SETLKLSLEMKKPLTCR 512
+ L++K+ LT +
Sbjct: 425 EDHTNYELDIKETLTLK 441
>pdb|3EKD|A Chain A, Crystal Structure Of The A264m Heme Domain Of Cytochrome
P450 Bm3
pdb|3EKD|B Chain B, Crystal Structure Of The A264m Heme Domain Of Cytochrome
P450 Bm3
Length = 470
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 62/257 (24%), Positives = 108/257 (42%), Gaps = 23/257 (8%)
Query: 261 KRRCHKLAARVKTLIGQVVEERKKNSGEFNNGGNDFLSALLSLPKEDQLSDADTVAILWE 320
KR+ + + L+ +++ +RK SGE +D L+ +L+ + D I ++
Sbjct: 202 KRQFQEDIKVMNDLVDKIIADRKA-SGE---QSDDLLTHMLNGKDPETGEPLDDENIRYQ 257
Query: 321 MV---FRGTDTVAILLEWIMARIVLHQDIQTKVQNEIDTWVGRDRHVEDSDISSLPYLQA 377
++ G +T + LL + + +V + + K E V D + L Y+
Sbjct: 258 IITFLIMGHETTSGLLSFALYFLVKNPHVLQKAAEEA-ARVLVDPVPSYKQVKQLKYVGM 316
Query: 378 IVKEVLRMHPPGPLLSWARLAVHDVHVDKVF-VPAGTTAMVNMWAITHDPTIWKNP-WTF 435
++ E LR+ P P S A D + + + G MV + + D TIW + F
Sbjct: 317 VLNEALRLWPTAPAFSL--YAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEF 374
Query: 436 KPERFIEEDVPILGSDLRLAPFGSGRRVCPGKALGLATVHLWLARLLHRFRWLPAEPVDL 495
+PERF + P PFG+G+R C G+ L L L +L F D
Sbjct: 375 RPERF---ENPSAIPQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHF--------DF 423
Query: 496 SETLKLSLEMKKPLTCR 512
+ L++K+ LT +
Sbjct: 424 EDHTNYELDIKETLTLK 440
>pdb|2IJ2|A Chain A, Atomic Structure Of The Heme Domain Of Flavocytochrome
P450- Bm3
pdb|2IJ2|B Chain B, Atomic Structure Of The Heme Domain Of Flavocytochrome
P450- Bm3
Length = 470
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 62/257 (24%), Positives = 108/257 (42%), Gaps = 23/257 (8%)
Query: 261 KRRCHKLAARVKTLIGQVVEERKKNSGEFNNGGNDFLSALLSLPKEDQLSDADTVAILWE 320
KR+ + + L+ +++ +RK SGE +D L+ +L+ + D I ++
Sbjct: 202 KRQFQEDIKVMNDLVDKIIADRKA-SGE---QSDDLLTHMLNGKDPETGEPLDDENIRYQ 257
Query: 321 MV---FRGTDTVAILLEWIMARIVLHQDIQTKVQNEIDTWVGRDRHVEDSDISSLPYLQA 377
++ G +T + LL + + +V + + K E V D + L Y+
Sbjct: 258 IITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEA-ARVLVDPVPSYKQVKQLKYVGM 316
Query: 378 IVKEVLRMHPPGPLLSWARLAVHDVHVDKVF-VPAGTTAMVNMWAITHDPTIWKNP-WTF 435
++ E LR+ P P S A D + + + G MV + + D TIW + F
Sbjct: 317 VLNEALRLWPTAPAFSL--YAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEF 374
Query: 436 KPERFIEEDVPILGSDLRLAPFGSGRRVCPGKALGLATVHLWLARLLHRFRWLPAEPVDL 495
+PERF + P PFG+G+R C G+ L L L +L F D
Sbjct: 375 RPERF---ENPSAIPQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHF--------DF 423
Query: 496 SETLKLSLEMKKPLTCR 512
+ L++K+ LT +
Sbjct: 424 EDHTNYELDIKETLTLK 440
>pdb|2HPD|A Chain A, Crystal Structure Of Hemoprotein Domain Of P450bm-3, A
Prototype For Microsomal P450's
pdb|2HPD|B Chain B, Crystal Structure Of Hemoprotein Domain Of P450bm-3, A
Prototype For Microsomal P450's
pdb|1FAG|A Chain A, Structure Of Cytochrome P450
pdb|1FAG|B Chain B, Structure Of Cytochrome P450
pdb|1FAG|C Chain C, Structure Of Cytochrome P450
pdb|1FAG|D Chain D, Structure Of Cytochrome P450
Length = 471
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 62/257 (24%), Positives = 108/257 (42%), Gaps = 23/257 (8%)
Query: 261 KRRCHKLAARVKTLIGQVVEERKKNSGEFNNGGNDFLSALLSLPKEDQLSDADTVAILWE 320
KR+ + + L+ +++ +RK SGE +D L+ +L+ + D I ++
Sbjct: 202 KRQFQEDIKVMNDLVDKIIADRKA-SGE---QSDDLLTHMLNGKDPETGEPLDDENIRYQ 257
Query: 321 MV---FRGTDTVAILLEWIMARIVLHQDIQTKVQNEIDTWVGRDRHVEDSDISSLPYLQA 377
++ G +T + LL + + +V + + K E V D + L Y+
Sbjct: 258 IITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEA-ARVLVDPVPSYKQVKQLKYVGM 316
Query: 378 IVKEVLRMHPPGPLLSWARLAVHDVHVDKVF-VPAGTTAMVNMWAITHDPTIWKNP-WTF 435
++ E LR+ P P S A D + + + G MV + + D TIW + F
Sbjct: 317 VLNEALRLWPTAPAFSL--YAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEF 374
Query: 436 KPERFIEEDVPILGSDLRLAPFGSGRRVCPGKALGLATVHLWLARLLHRFRWLPAEPVDL 495
+PERF + P PFG+G+R C G+ L L L +L F D
Sbjct: 375 RPERF---ENPSAIPQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHF--------DF 423
Query: 496 SETLKLSLEMKKPLTCR 512
+ L++K+ LT +
Sbjct: 424 EDHTNYELDIKETLTLK 440
>pdb|1ZO4|A Chain A, Crystal Structure Of A328s Mutant Of The Heme Domain Of
P450bm-3
pdb|1ZO4|B Chain B, Crystal Structure Of A328s Mutant Of The Heme Domain Of
P450bm-3
Length = 473
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 62/257 (24%), Positives = 108/257 (42%), Gaps = 23/257 (8%)
Query: 261 KRRCHKLAARVKTLIGQVVEERKKNSGEFNNGGNDFLSALLSLPKEDQLSDADTVAILWE 320
KR+ + + L+ +++ +RK SGE +D L+ +L+ + D I ++
Sbjct: 205 KRQFQEDIKVMNDLVDKIIADRKA-SGE---QSDDLLTHMLNGKDPETGEPLDDENIRYQ 260
Query: 321 MV---FRGTDTVAILLEWIMARIVLHQDIQTKVQNEIDTWVGRDRHVEDSDISSLPYLQA 377
++ G +T + LL + + +V + + K E V D + L Y+
Sbjct: 261 IITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEA-ARVLVDPVPSYKQVKQLKYVGM 319
Query: 378 IVKEVLRMHPPGPLLSWARLAVHDVHVDKVF-VPAGTTAMVNMWAITHDPTIWKNP-WTF 435
++ E LR+ P P S A D + + + G MV + + D TIW + F
Sbjct: 320 VLNEALRLWPTSPAFSL--YAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEF 377
Query: 436 KPERFIEEDVPILGSDLRLAPFGSGRRVCPGKALGLATVHLWLARLLHRFRWLPAEPVDL 495
+PERF + P PFG+G+R C G+ L L L +L F D
Sbjct: 378 RPERF---ENPSAIPQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHF--------DF 426
Query: 496 SETLKLSLEMKKPLTCR 512
+ L++K+ LT +
Sbjct: 427 EDHTNYELDIKETLTLK 443
>pdb|2X7Y|A Chain A, P450 Bm3 F87a In Complex With Dmso
pdb|2X7Y|B Chain B, P450 Bm3 F87a In Complex With Dmso
pdb|2X80|A Chain A, P450 Bm3 F87a In Complex With Dmso
pdb|2X80|B Chain B, P450 Bm3 F87a In Complex With Dmso
Length = 455
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 62/257 (24%), Positives = 108/257 (42%), Gaps = 23/257 (8%)
Query: 261 KRRCHKLAARVKTLIGQVVEERKKNSGEFNNGGNDFLSALLSLPKEDQLSDADTVAILWE 320
KR+ + + L+ +++ +RK SGE +D L+ +L+ + D I ++
Sbjct: 202 KRQFQEDIKVMNDLVDKIIADRKA-SGE---QSDDLLTHMLNGKDPETGEPLDDENIRYQ 257
Query: 321 MV---FRGTDTVAILLEWIMARIVLHQDIQTKVQNEIDTWVGRDRHVEDSDISSLPYLQA 377
++ G +T + LL + + +V + + K E V D + L Y+
Sbjct: 258 IITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEA-ARVLVDPVPSYKQVKQLKYVGM 316
Query: 378 IVKEVLRMHPPGPLLSWARLAVHDVHVDKVF-VPAGTTAMVNMWAITHDPTIWKNP-WTF 435
++ E LR+ P P S A D + + + G MV + + D TIW + F
Sbjct: 317 VLNEALRLWPTAPAFSL--YAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEF 374
Query: 436 KPERFIEEDVPILGSDLRLAPFGSGRRVCPGKALGLATVHLWLARLLHRFRWLPAEPVDL 495
+PERF + P PFG+G+R C G+ L L L +L F D
Sbjct: 375 RPERF---ENPSAIPQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHF--------DF 423
Query: 496 SETLKLSLEMKKPLTCR 512
+ L++K+ LT +
Sbjct: 424 EDHTNYELDIKETLTLK 440
>pdb|2BMH|A Chain A, Modeling Protein-Substrate Interactions In The Heme Domain
Of Cytochrome P450bm-3
pdb|2BMH|B Chain B, Modeling Protein-Substrate Interactions In The Heme Domain
Of Cytochrome P450bm-3
pdb|1BU7|A Chain A, Cryogenic Structure Of Cytochrome P450bm-3 Heme Domain
pdb|1BU7|B Chain B, Cryogenic Structure Of Cytochrome P450bm-3 Heme Domain
pdb|2J1M|A Chain A, P450 Bm3 Heme Domain In Complex With Dmso
pdb|2J1M|B Chain B, P450 Bm3 Heme Domain In Complex With Dmso
pdb|2J4S|A Chain A, P450 Bm3 Heme Domain In Complex With Dmso
pdb|2J4S|B Chain B, P450 Bm3 Heme Domain In Complex With Dmso
Length = 455
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 62/257 (24%), Positives = 108/257 (42%), Gaps = 23/257 (8%)
Query: 261 KRRCHKLAARVKTLIGQVVEERKKNSGEFNNGGNDFLSALLSLPKEDQLSDADTVAILWE 320
KR+ + + L+ +++ +RK SGE +D L+ +L+ + D I ++
Sbjct: 202 KRQFQEDIKVMNDLVDKIIADRKA-SGE---QSDDLLTHMLNGKDPETGEPLDDENIRYQ 257
Query: 321 MV---FRGTDTVAILLEWIMARIVLHQDIQTKVQNEIDTWVGRDRHVEDSDISSLPYLQA 377
++ G +T + LL + + +V + + K E V D + L Y+
Sbjct: 258 IITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEA-ARVLVDPVPSYKQVKQLKYVGM 316
Query: 378 IVKEVLRMHPPGPLLSWARLAVHDVHVDKVF-VPAGTTAMVNMWAITHDPTIWKNP-WTF 435
++ E LR+ P P S A D + + + G MV + + D TIW + F
Sbjct: 317 VLNEALRLWPTAPAFSL--YAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEF 374
Query: 436 KPERFIEEDVPILGSDLRLAPFGSGRRVCPGKALGLATVHLWLARLLHRFRWLPAEPVDL 495
+PERF + P PFG+G+R C G+ L L L +L F D
Sbjct: 375 RPERF---ENPSAIPQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHF--------DF 423
Query: 496 SETLKLSLEMKKPLTCR 512
+ L++K+ LT +
Sbjct: 424 EDHTNYELDIKETLTLK 440
>pdb|3EKB|A Chain A, Crystal Structure Of The A264c Mutant Heme Domain Of
Cytochrome P450 Bm3
pdb|3EKB|B Chain B, Crystal Structure Of The A264c Mutant Heme Domain Of
Cytochrome P450 Bm3
Length = 470
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 62/257 (24%), Positives = 108/257 (42%), Gaps = 23/257 (8%)
Query: 261 KRRCHKLAARVKTLIGQVVEERKKNSGEFNNGGNDFLSALLSLPKEDQLSDADTVAILWE 320
KR+ + + L+ +++ +RK SGE +D L+ +L+ + D I ++
Sbjct: 202 KRQFQEDIKVMNDLVDKIIADRKA-SGE---QSDDLLTHMLNGKDPETGEPLDDENIRYQ 257
Query: 321 MV---FRGTDTVAILLEWIMARIVLHQDIQTKVQNEIDTWVGRDRHVEDSDISSLPYLQA 377
++ G +T + LL + + +V + + K E V D + L Y+
Sbjct: 258 IITFLICGHETTSGLLSFALYFLVKNPHVLQKAAEEA-ARVLVDPVPSYKQVKQLKYVGM 316
Query: 378 IVKEVLRMHPPGPLLSWARLAVHDVHVDKVF-VPAGTTAMVNMWAITHDPTIWKNP-WTF 435
++ E LR+ P P S A D + + + G MV + + D TIW + F
Sbjct: 317 VLNEALRLWPTAPAFSL--YAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEF 374
Query: 436 KPERFIEEDVPILGSDLRLAPFGSGRRVCPGKALGLATVHLWLARLLHRFRWLPAEPVDL 495
+PERF + P PFG+G+R C G+ L L L +L F D
Sbjct: 375 RPERF---ENPSAIPQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHF--------DF 423
Query: 496 SETLKLSLEMKKPLTCR 512
+ L++K+ LT +
Sbjct: 424 EDHTNYELDIKETLTLK 440
>pdb|3M4V|A Chain A, Crystal Structure Of The A330p Mutant Of Cytochrome P450
Bm3
pdb|3M4V|B Chain B, Crystal Structure Of The A330p Mutant Of Cytochrome P450
Bm3
Length = 482
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 62/257 (24%), Positives = 108/257 (42%), Gaps = 23/257 (8%)
Query: 261 KRRCHKLAARVKTLIGQVVEERKKNSGEFNNGGNDFLSALLSLPKEDQLSDADTVAILWE 320
KR+ + + L+ +++ +RK SGE +D L+ +L+ + D I ++
Sbjct: 203 KRQFQEDIKVMNDLVDKIIADRKA-SGE---QSDDLLTHMLNGKDPETGEPLDDENIRYQ 258
Query: 321 MV---FRGTDTVAILLEWIMARIVLHQDIQTKVQNEIDTWVGRDRHVEDSDISSLPYLQA 377
++ G +T + LL + + +V + + K E V D + L Y+
Sbjct: 259 IITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEA-ARVLVDPVPSYKQVKQLKYVGM 317
Query: 378 IVKEVLRMHPPGPLLSWARLAVHDVHVDKVF-VPAGTTAMVNMWAITHDPTIWKNP-WTF 435
++ E LR+ P P S A D + + + G MV + + D TIW + F
Sbjct: 318 VLNEALRLWPTAPPFSL--YAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEF 375
Query: 436 KPERFIEEDVPILGSDLRLAPFGSGRRVCPGKALGLATVHLWLARLLHRFRWLPAEPVDL 495
+PERF + P PFG+G+R C G+ L L L +L F D
Sbjct: 376 RPERF---ENPSAIPQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHF--------DF 424
Query: 496 SETLKLSLEMKKPLTCR 512
+ L++K+ LT +
Sbjct: 425 EDHTNYELDIKETLTLK 441
>pdb|1ZOA|A Chain A, Crystal Structure Of A328v Mutant Of The Heme Domain Of
P450bm-3 With N-Palmitoylglycine
pdb|1ZOA|B Chain B, Crystal Structure Of A328v Mutant Of The Heme Domain Of
P450bm-3 With N-Palmitoylglycine
Length = 473
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 62/257 (24%), Positives = 108/257 (42%), Gaps = 23/257 (8%)
Query: 261 KRRCHKLAARVKTLIGQVVEERKKNSGEFNNGGNDFLSALLSLPKEDQLSDADTVAILWE 320
KR+ + + L+ +++ +RK SGE +D L+ +L+ + D I ++
Sbjct: 205 KRQFQEDIKVMNDLVDKIIADRKA-SGE---QSDDLLTHMLNGKDPETGEPLDDENIRYQ 260
Query: 321 MV---FRGTDTVAILLEWIMARIVLHQDIQTKVQNEIDTWVGRDRHVEDSDISSLPYLQA 377
++ G +T + LL + + +V + + K E V D + L Y+
Sbjct: 261 IITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEA-ARVLVDPVPSYKQVKQLKYVGM 319
Query: 378 IVKEVLRMHPPGPLLSWARLAVHDVHVDKVF-VPAGTTAMVNMWAITHDPTIWKNP-WTF 435
++ E LR+ P P S A D + + + G MV + + D TIW + F
Sbjct: 320 VLNEALRLWPTVPAFSL--YAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEF 377
Query: 436 KPERFIEEDVPILGSDLRLAPFGSGRRVCPGKALGLATVHLWLARLLHRFRWLPAEPVDL 495
+PERF + P PFG+G+R C G+ L L L +L F D
Sbjct: 378 RPERF---ENPSAIPQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHF--------DF 426
Query: 496 SETLKLSLEMKKPLTCR 512
+ L++K+ LT +
Sbjct: 427 EDHTNYELDIKETLTLK 443
>pdb|1P0X|A Chain A, F393y Mutant Heme Domain Of Flavocytochrome P450 Bm3
pdb|1P0X|B Chain B, F393y Mutant Heme Domain Of Flavocytochrome P450 Bm3
Length = 455
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 61/257 (23%), Positives = 108/257 (42%), Gaps = 23/257 (8%)
Query: 261 KRRCHKLAARVKTLIGQVVEERKKNSGEFNNGGNDFLSALLSLPKEDQLSDADTVAILWE 320
KR+ + + L+ +++ +RK SGE +D L+ +L+ + D I ++
Sbjct: 202 KRQFQEDIKVMNDLVDKIIADRKA-SGE---QSDDLLTHMLNGKDPETGEPLDDENIRYQ 257
Query: 321 MV---FRGTDTVAILLEWIMARIVLHQDIQTKVQNEIDTWVGRDRHVEDSDISSLPYLQA 377
++ G +T + LL + + +V + + K E V D + L Y+
Sbjct: 258 IITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEA-ARVLVDPVPSYKQVKQLKYVGM 316
Query: 378 IVKEVLRMHPPGPLLSWARLAVHDVHVDKVF-VPAGTTAMVNMWAITHDPTIWKNP-WTF 435
++ E LR+ P P S A D + + + G MV + + D TIW + F
Sbjct: 317 VLNEALRLWPTAPAFSL--YAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEF 374
Query: 436 KPERFIEEDVPILGSDLRLAPFGSGRRVCPGKALGLATVHLWLARLLHRFRWLPAEPVDL 495
+PERF + P P+G+G+R C G+ L L L +L F D
Sbjct: 375 RPERF---ENPSAIPQHAFKPYGNGQRACIGQQFALHEATLVLGMMLKHF--------DF 423
Query: 496 SETLKLSLEMKKPLTCR 512
+ L++K+ LT +
Sbjct: 424 EDHTNYELDIKETLTLK 440
>pdb|4DUB|A Chain A, Cytochrome P450 Bm3h-9d7 Mri Sensor Bound To Dopamine
pdb|4DUB|B Chain B, Cytochrome P450 Bm3h-9d7 Mri Sensor Bound To Dopamine
Length = 472
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 63/251 (25%), Positives = 107/251 (42%), Gaps = 17/251 (6%)
Query: 261 KRRCHKLAARVKTLIGQVVEERKKNSGEFNNGGNDFLSALLSLPKEDQLSDADTVAILWE 320
KR+ + + L+ +++ +RK SGE +D L+ +L+ + D I ++
Sbjct: 203 KRQFQEDIKVMNDLVDKIIADRKA-SGE---QSDDLLTHMLNGKDPETGEPLDDENIRYQ 258
Query: 321 MVF---RGTDTVAILLEWIMARIVLHQDIQTKVQNEIDTWVGRDRHVEDSDISSLPYLQA 377
++ G + + LL + + +V + + K E V D + L Y+
Sbjct: 259 IITFLAAGHEATSGLLSFALYFLVKNPHVLQKAAEEA-ARVLVDPVPSYKQVKQLKYVGM 317
Query: 378 IVKEVLRMHPPGPLLSWARLAVHDVHVDKVF-VPAGTTAMVNMWAITHDPTIWKNP-WTF 435
++ E LR+ P GP S A D + + + G MV + + D TIW + F
Sbjct: 318 VLNEALRLWPTGPAFSL--YAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEF 375
Query: 436 KPERFIEEDVPILGSDLRLAPFGSGRRVCPGKALGLATVHLWLARLLHRFRWLPAE--PV 493
+PERF + P PFG+G+R C G+ L L L +L F + +
Sbjct: 376 RPERF---ENPSAIPQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFEDHTNYEL 432
Query: 494 DLSETLKLSLE 504
D+ ETL L E
Sbjct: 433 DIKETLVLKPE 443
>pdb|4DUA|A Chain A, Cytochrome P450 Bm3h-9d7 Mri Sensor, No Ligand
pdb|4DUA|B Chain B, Cytochrome P450 Bm3h-9d7 Mri Sensor, No Ligand
Length = 471
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 63/251 (25%), Positives = 107/251 (42%), Gaps = 17/251 (6%)
Query: 261 KRRCHKLAARVKTLIGQVVEERKKNSGEFNNGGNDFLSALLSLPKEDQLSDADTVAILWE 320
KR+ + + L+ +++ +RK SGE +D L+ +L+ + D I ++
Sbjct: 202 KRQFQEDIKVMNDLVDKIIADRKA-SGE---QSDDLLTHMLNGKDPETGEPLDDENIRYQ 257
Query: 321 MVF---RGTDTVAILLEWIMARIVLHQDIQTKVQNEIDTWVGRDRHVEDSDISSLPYLQA 377
++ G + + LL + + +V + + K E V D + L Y+
Sbjct: 258 IITFLAAGHEATSGLLSFALYFLVKNPHVLQKAAEEA-ARVLVDPVPSYKQVKQLKYVGM 316
Query: 378 IVKEVLRMHPPGPLLSWARLAVHDVHVDKVF-VPAGTTAMVNMWAITHDPTIWKNP-WTF 435
++ E LR+ P GP S A D + + + G MV + + D TIW + F
Sbjct: 317 VLNEALRLWPTGPAFSL--YAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEF 374
Query: 436 KPERFIEEDVPILGSDLRLAPFGSGRRVCPGKALGLATVHLWLARLLHRFRWLPAE--PV 493
+PERF + P PFG+G+R C G+ L L L +L F + +
Sbjct: 375 RPERF---ENPSAIPQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFEDHTNYEL 431
Query: 494 DLSETLKLSLE 504
D+ ETL L E
Sbjct: 432 DIKETLVLKPE 442
>pdb|1YQP|A Chain A, T268n Mutant Cytochrome Domain Of Flavocytochrome P450 Bm3
pdb|1YQP|B Chain B, T268n Mutant Cytochrome Domain Of Flavocytochrome P450 Bm3
Length = 455
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 61/257 (23%), Positives = 107/257 (41%), Gaps = 23/257 (8%)
Query: 261 KRRCHKLAARVKTLIGQVVEERKKNSGEFNNGGNDFLSALLSLPKEDQLSDADTVAILWE 320
KR+ + + L+ +++ +RK SGE +D L+ +L+ + D I ++
Sbjct: 202 KRQFQEDIKVMNDLVDKIIADRKA-SGE---QSDDLLTHMLNGKDPETGEPLDDENIRYQ 257
Query: 321 MV---FRGTDTVAILLEWIMARIVLHQDIQTKVQNEIDTWVGRDRHVEDSDISSLPYLQA 377
++ G + + LL + + +V + + K E V D + L Y+
Sbjct: 258 IITFLIAGHENTSGLLSFALYFLVKNPHVLQKAAEEA-ARVLVDPVPSYKQVKQLKYVGM 316
Query: 378 IVKEVLRMHPPGPLLSWARLAVHDVHVDKVF-VPAGTTAMVNMWAITHDPTIWKNP-WTF 435
++ E LR+ P P S A D + + + G MV + + D TIW + F
Sbjct: 317 VLNEALRLWPTAPAFSL--YAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEF 374
Query: 436 KPERFIEEDVPILGSDLRLAPFGSGRRVCPGKALGLATVHLWLARLLHRFRWLPAEPVDL 495
+PERF + P PFG+G+R C G+ L L L +L F D
Sbjct: 375 RPERF---ENPSAIPQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHF--------DF 423
Query: 496 SETLKLSLEMKKPLTCR 512
+ L++K+ LT +
Sbjct: 424 EDHTNYELDIKETLTLK 440
>pdb|1FAH|A Chain A, Structure Of Cytochrome P450
pdb|1FAH|B Chain B, Structure Of Cytochrome P450
Length = 471
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 61/257 (23%), Positives = 107/257 (41%), Gaps = 23/257 (8%)
Query: 261 KRRCHKLAARVKTLIGQVVEERKKNSGEFNNGGNDFLSALLSLPKEDQLSDADTVAILWE 320
KR+ + + L+ +++ +RK SGE +D L+ +L+ + D I ++
Sbjct: 202 KRQFQEDIKVMNDLVDKIIADRKA-SGE---QSDDLLTHMLNGKDPETGEPLDDENIRYQ 257
Query: 321 MV---FRGTDTVAILLEWIMARIVLHQDIQTKVQNEIDTWVGRDRHVEDSDISSLPYLQA 377
++ G + + LL + + +V + + K E V D + L Y+
Sbjct: 258 IITFLIAGHEATSGLLSFALYFLVKNPHVLQKAAEEA-ARVLVDPVPSYKQVKQLKYVGM 316
Query: 378 IVKEVLRMHPPGPLLSWARLAVHDVHVDKVF-VPAGTTAMVNMWAITHDPTIWKNP-WTF 435
++ E LR+ P P S A D + + + G MV + + D TIW + F
Sbjct: 317 VLNEALRLWPTAPAFSL--YAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEF 374
Query: 436 KPERFIEEDVPILGSDLRLAPFGSGRRVCPGKALGLATVHLWLARLLHRFRWLPAEPVDL 495
+PERF + P PFG+G+R C G+ L L L +L F D
Sbjct: 375 RPERF---ENPSAIPQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHF--------DF 423
Query: 496 SETLKLSLEMKKPLTCR 512
+ L++K+ LT +
Sbjct: 424 EDHTNYELDIKETLTLK 440
>pdb|3DGI|A Chain A, Crystal Structure Of F87aT268A MUTANT OF CYP BM3
pdb|3DGI|B Chain B, Crystal Structure Of F87aT268A MUTANT OF CYP BM3
Length = 461
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 61/257 (23%), Positives = 107/257 (41%), Gaps = 23/257 (8%)
Query: 261 KRRCHKLAARVKTLIGQVVEERKKNSGEFNNGGNDFLSALLSLPKEDQLSDADTVAILWE 320
KR+ + + L+ +++ +RK SGE +D L+ +L+ + D I ++
Sbjct: 202 KRQFQEDIKVMNDLVDKIIADRKA-SGE---QSDDLLTHMLNGKDPETGEPLDDENIRYQ 257
Query: 321 MV---FRGTDTVAILLEWIMARIVLHQDIQTKVQNEIDTWVGRDRHVEDSDISSLPYLQA 377
++ G + + LL + + +V + + K E V D + L Y+
Sbjct: 258 IITFLIAGHEATSGLLSFALYFLVKNPHVLQKAAEEA-ARVLVDPVPSYKQVKQLKYVGM 316
Query: 378 IVKEVLRMHPPGPLLSWARLAVHDVHVDKVF-VPAGTTAMVNMWAITHDPTIWKNP-WTF 435
++ E LR+ P P S A D + + + G MV + + D TIW + F
Sbjct: 317 VLNEALRLWPTAPAFSL--YAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEF 374
Query: 436 KPERFIEEDVPILGSDLRLAPFGSGRRVCPGKALGLATVHLWLARLLHRFRWLPAEPVDL 495
+PERF + P PFG+G+R C G+ L L L +L F D
Sbjct: 375 RPERF---ENPSAIPQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHF--------DF 423
Query: 496 SETLKLSLEMKKPLTCR 512
+ L++K+ LT +
Sbjct: 424 EDHTNYELDIKETLTLK 440
>pdb|1YQO|A Chain A, T268a Mutant Heme Domain Of Flavocytochrome P450 Bm3
pdb|1YQO|B Chain B, T268a Mutant Heme Domain Of Flavocytochrome P450 Bm3
Length = 455
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 61/257 (23%), Positives = 107/257 (41%), Gaps = 23/257 (8%)
Query: 261 KRRCHKLAARVKTLIGQVVEERKKNSGEFNNGGNDFLSALLSLPKEDQLSDADTVAILWE 320
KR+ + + L+ +++ +RK SGE +D L+ +L+ + D I ++
Sbjct: 202 KRQFQEDIKVMNDLVDKIIADRKA-SGE---QSDDLLTHMLNGKDPETGEPLDDENIRYQ 257
Query: 321 MV---FRGTDTVAILLEWIMARIVLHQDIQTKVQNEIDTWVGRDRHVEDSDISSLPYLQA 377
++ G + + LL + + +V + + K E V D + L Y+
Sbjct: 258 IITFLIAGHEATSGLLSFALYFLVKNPHVLQKAAEEA-ARVLVDPVPSYKQVKQLKYVGM 316
Query: 378 IVKEVLRMHPPGPLLSWARLAVHDVHVDKVF-VPAGTTAMVNMWAITHDPTIWKNP-WTF 435
++ E LR+ P P S A D + + + G MV + + D TIW + F
Sbjct: 317 VLNEALRLWPTAPAFSL--YAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEF 374
Query: 436 KPERFIEEDVPILGSDLRLAPFGSGRRVCPGKALGLATVHLWLARLLHRFRWLPAEPVDL 495
+PERF + P PFG+G+R C G+ L L L +L F D
Sbjct: 375 RPERF---ENPSAIPQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHF--------DF 423
Query: 496 SETLKLSLEMKKPLTCR 512
+ L++K+ LT +
Sbjct: 424 EDHTNYELDIKETLTLK 440
>pdb|3QI8|B Chain B, Evolved Variant Of Cytochrome P450 (Bm3, Cyp102a1)
pdb|3QI8|A Chain A, Evolved Variant Of Cytochrome P450 (Bm3, Cyp102a1)
Length = 472
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 61/248 (24%), Positives = 105/248 (42%), Gaps = 17/248 (6%)
Query: 261 KRRCHKLAARVKTLIGQVVEERKKNSGEFNNGGNDFLSALLSLPKEDQLSDADTVAILWE 320
KR+ + + L+ +++ +RK SGE +D L+ +L + D I ++
Sbjct: 203 KRQFQEDIKVMNDLVDKIIADRKA-SGE---QSDDLLTHMLHGKDPETGEPLDDENIRYQ 258
Query: 321 MV---FRGTDTVAILLEWIMARIVLHQDIQTKVQNEIDTWVGRDRHVEDSDISSLPYLQA 377
++ G +T + LL + + +V + + K E V D + L Y+
Sbjct: 259 IITFLIAGHETTSGLLTFALYFLVKNPHVLQKAAEEA-ARVLVDPVPSYKQVKQLKYVGM 317
Query: 378 IVKEVLRMHPPGPLLSWARLAVHDVHVDKVF-VPAGTTAMVNMWAITHDPTIWKNP-WTF 435
++ E LR+ P P S A D + + + G MV + + D T+W + F
Sbjct: 318 VLNEALRIWPTAPAFSL--YAKEDTMLGGEYPLEKGDELMVLIPQLHRDKTVWGDDVEEF 375
Query: 436 KPERFIEEDVPILGSDLRLAPFGSGRRVCPGKALGLATVHLWLARLLHRFRWLPAE--PV 493
+PERF + P PFG+G+R C G+ L L L +L F + +
Sbjct: 376 RPERF---ENPSAIPQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFEDHTNYEL 432
Query: 494 DLSETLKL 501
D+ ETL L
Sbjct: 433 DIEETLTL 440
>pdb|4DUC|A Chain A, Cytochrome P450 Bm3h-2g9 Mri Sensor, No Ligand
pdb|4DUC|B Chain B, Cytochrome P450 Bm3h-2g9 Mri Sensor, No Ligand
Length = 472
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 62/251 (24%), Positives = 107/251 (42%), Gaps = 17/251 (6%)
Query: 261 KRRCHKLAARVKTLIGQVVEERKKNSGEFNNGGNDFLSALLSLPKEDQLSDADTVAILWE 320
KR+ + + L+ +++ +RK SGE +D L+ +L+ + D I ++
Sbjct: 203 KRQFQEDIKVMNDLVDKIIADRKA-SGE---QSDDLLTHMLNGKDPETGEPLDDENIRYQ 258
Query: 321 MV---FRGTDTVAILLEWIMARIVLHQDIQTKVQNEIDTWVGRDRHVEDSDISSLPYLQA 377
++ G ++ + LL + + +V + + K E V D + L Y+
Sbjct: 259 IITFLIAGHESTSGLLSFALYFLVKNPHVLQKAAEEA-ARVLVDPVPSYKQVKQLKYVGM 317
Query: 378 IVKEVLRMHPPGPLLSWARLAVHDVHVDKVF-VPAGTTAMVNMWAITHDPTIWKNP-WTF 435
++ E LR+ P P S A D + + + G MV + + D TIW + F
Sbjct: 318 VLNEALRLWPTAPAFSL--YAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEF 375
Query: 436 KPERFIEEDVPILGSDLRLAPFGSGRRVCPGKALGLATVHLWLARLLHRFRWLPAE--PV 493
+PERF + P PFG+G+R C G+ L L L +L F + +
Sbjct: 376 RPERF---ENPSAIPQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFEDHTNYEL 432
Query: 494 DLSETLKLSLE 504
D+ ETL L E
Sbjct: 433 DIKETLLLKPE 443
>pdb|4DUF|A Chain A, Cytochrome P450 Bm3h-2g9 Mri Sensor Bound To Serotonin
pdb|4DUF|B Chain B, Cytochrome P450 Bm3h-2g9 Mri Sensor Bound To Serotonin
pdb|4DUF|C Chain C, Cytochrome P450 Bm3h-2g9 Mri Sensor Bound To Serotonin
pdb|4DUF|D Chain D, Cytochrome P450 Bm3h-2g9 Mri Sensor Bound To Serotonin
Length = 471
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 62/251 (24%), Positives = 107/251 (42%), Gaps = 17/251 (6%)
Query: 261 KRRCHKLAARVKTLIGQVVEERKKNSGEFNNGGNDFLSALLSLPKEDQLSDADTVAILWE 320
KR+ + + L+ +++ +RK SGE +D L+ +L+ + D I ++
Sbjct: 202 KRQFQEDIKVMNDLVDKIIADRKA-SGE---QSDDLLTHMLNGKDPETGEPLDDENIRYQ 257
Query: 321 MV---FRGTDTVAILLEWIMARIVLHQDIQTKVQNEIDTWVGRDRHVEDSDISSLPYLQA 377
++ G ++ + LL + + +V + + K E V D + L Y+
Sbjct: 258 IITFLIAGHESTSGLLSFALYFLVKNPHVLQKAAEEA-ARVLVDPVPSYKQVKQLKYVGM 316
Query: 378 IVKEVLRMHPPGPLLSWARLAVHDVHVDKVF-VPAGTTAMVNMWAITHDPTIWKNP-WTF 435
++ E LR+ P P S A D + + + G MV + + D TIW + F
Sbjct: 317 VLNEALRLWPTAPAFSL--YAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEF 374
Query: 436 KPERFIEEDVPILGSDLRLAPFGSGRRVCPGKALGLATVHLWLARLLHRFRWLPAE--PV 493
+PERF + P PFG+G+R C G+ L L L +L F + +
Sbjct: 375 RPERF---ENPSAIPQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFEDHTNYEL 431
Query: 494 DLSETLKLSLE 504
D+ ETL L E
Sbjct: 432 DIKETLLLKPE 442
>pdb|1P0W|A Chain A, F393w Mutant Heme Domain Of Flavocytochrome P450 Bm3
pdb|1P0W|B Chain B, F393w Mutant Heme Domain Of Flavocytochrome P450 Bm3
Length = 455
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 61/257 (23%), Positives = 108/257 (42%), Gaps = 23/257 (8%)
Query: 261 KRRCHKLAARVKTLIGQVVEERKKNSGEFNNGGNDFLSALLSLPKEDQLSDADTVAILWE 320
KR+ + + L+ +++ +RK SGE +D L+ +L+ + D I ++
Sbjct: 202 KRQFQEDIKVMNDLVDKIIADRKA-SGE---QSDDLLTHMLNGKDPETGEPLDDENIRYQ 257
Query: 321 MV---FRGTDTVAILLEWIMARIVLHQDIQTKVQNEIDTWVGRDRHVEDSDISSLPYLQA 377
++ G +T + LL + + +V + + K E V D + L Y+
Sbjct: 258 IITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEA-ARVLVDPVPSYKQVKQLKYVGM 316
Query: 378 IVKEVLRMHPPGPLLSWARLAVHDVHVDKVF-VPAGTTAMVNMWAITHDPTIWKNP-WTF 435
++ E LR+ P P S A D + + + G MV + + D TIW + F
Sbjct: 317 VLNEALRLWPTAPAFSL--YAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEF 374
Query: 436 KPERFIEEDVPILGSDLRLAPFGSGRRVCPGKALGLATVHLWLARLLHRFRWLPAEPVDL 495
+PERF + P P+G+G+R C G+ L L L +L F D
Sbjct: 375 RPERF---ENPSAIPQHAFKPWGNGQRACIGQQFALHEATLVLGMMLKHF--------DF 423
Query: 496 SETLKLSLEMKKPLTCR 512
+ L++K+ LT +
Sbjct: 424 EDHTNYELDIKETLTLK 440
>pdb|1JME|A Chain A, Crystal Structure Of Phe393his Cytochrome P450 Bm3
pdb|1JME|B Chain B, Crystal Structure Of Phe393his Cytochrome P450 Bm3
Length = 455
Score = 51.6 bits (122), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 61/257 (23%), Positives = 107/257 (41%), Gaps = 23/257 (8%)
Query: 261 KRRCHKLAARVKTLIGQVVEERKKNSGEFNNGGNDFLSALLSLPKEDQLSDADTVAILWE 320
KR+ + + L+ +++ +RK SGE +D L+ +L+ + D I ++
Sbjct: 202 KRQFQEDIKVMNDLVDKIIADRKA-SGE---QSDDLLTHMLNGKDPETGEPLDDENIRYQ 257
Query: 321 MV---FRGTDTVAILLEWIMARIVLHQDIQTKVQNEIDTWVGRDRHVEDSDISSLPYLQA 377
++ G +T + LL + + +V + + K E V D + L Y+
Sbjct: 258 IITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEA-ARVLVDPVPSYKQVKQLKYVGM 316
Query: 378 IVKEVLRMHPPGPLLSWARLAVHDVHVDKVF-VPAGTTAMVNMWAITHDPTIWKNP-WTF 435
++ E LR+ P P S A D + + + G MV + + D TIW + F
Sbjct: 317 VLNEALRLWPTAPAFSL--YAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEF 374
Query: 436 KPERFIEEDVPILGSDLRLAPFGSGRRVCPGKALGLATVHLWLARLLHRFRWLPAEPVDL 495
+PERF + P P G+G+R C G+ L L L +L F D
Sbjct: 375 RPERF---ENPSAIPQHAFKPHGNGQRACIGQQFALHEATLVLGMMLKHF--------DF 423
Query: 496 SETLKLSLEMKKPLTCR 512
+ L++K+ LT +
Sbjct: 424 EDHTNYELDIKETLTLK 440
>pdb|4DUD|A Chain A, Cytochrome P450 Bm3h-2g9c6 Mri Sensor, No Ligand
pdb|4DUD|B Chain B, Cytochrome P450 Bm3h-2g9c6 Mri Sensor, No Ligand
pdb|4DUE|A Chain A, Cytochrome P450 Bm3h-2g9c6 Mri Sensor Bound To Serotonin
pdb|4DUE|B Chain B, Cytochrome P450 Bm3h-2g9c6 Mri Sensor Bound To Serotonin
Length = 471
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 56/232 (24%), Positives = 99/232 (42%), Gaps = 15/232 (6%)
Query: 261 KRRCHKLAARVKTLIGQVVEERKKNSGEFNNGGNDFLSALLSLPKEDQLSDADTVAILWE 320
KR+ + + L+ +++ +RK SGE +D L+ +L+ + D I ++
Sbjct: 202 KRQFQEDIKVMNDLVDKIIADRKA-SGE---QSDDLLTHMLNGKDPETGEPLDDENIRYQ 257
Query: 321 MV---FRGTDTVAILLEWIMARIVLHQDIQTKVQNEIDTWVGRDRHVEDSDISSLPYLQA 377
++ G ++ + LL + + +V + + K E V D + L Y+
Sbjct: 258 IITFLIAGHESTSGLLSFALYFLVKNPHVLQKAAEEA-ARVLVDPVPSYKQVKQLKYVGM 316
Query: 378 IVKEVLRMHPPGPLLSWARLAVHDVHVDKVF-VPAGTTAMVNMWAITHDPTIWKNP-WTF 435
++ E LR+ P P S A D + + + G MV + + D TIW + F
Sbjct: 317 VLNEALRLWPTAPAFSL--YAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEF 374
Query: 436 KPERFIEEDVPILGSDLRLAPFGSGRRVCPGKALGLATVHLWLARLLHRFRW 487
+PERF + P PFG+G+R C G+ L L L +L F +
Sbjct: 375 RPERF---ENPSAIPQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDF 423
>pdb|1P0V|A Chain A, F393a Mutant Heme Domain Of Flavocytochrome P450 Bm3
pdb|1P0V|B Chain B, F393a Mutant Heme Domain Of Flavocytochrome P450 Bm3
Length = 455
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 61/257 (23%), Positives = 107/257 (41%), Gaps = 23/257 (8%)
Query: 261 KRRCHKLAARVKTLIGQVVEERKKNSGEFNNGGNDFLSALLSLPKEDQLSDADTVAILWE 320
KR+ + + L+ +++ +RK SGE +D L+ +L+ + D I ++
Sbjct: 202 KRQFQEDIKVMNDLVDKIIADRKA-SGE---QSDDLLTHMLNGKDPETGEPLDDENIRYQ 257
Query: 321 MV---FRGTDTVAILLEWIMARIVLHQDIQTKVQNEIDTWVGRDRHVEDSDISSLPYLQA 377
++ G +T + LL + + +V + + K E V D + L Y+
Sbjct: 258 IITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEA-ARVLVDPVPSYKQVKQLKYVGM 316
Query: 378 IVKEVLRMHPPGPLLSWARLAVHDVHVDKVF-VPAGTTAMVNMWAITHDPTIWKNP-WTF 435
++ E LR+ P P S A D + + + G MV + + D TIW + F
Sbjct: 317 VLNEALRLWPTAPAFSL--YAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEF 374
Query: 436 KPERFIEEDVPILGSDLRLAPFGSGRRVCPGKALGLATVHLWLARLLHRFRWLPAEPVDL 495
+PERF + P P G+G+R C G+ L L L +L F D
Sbjct: 375 RPERF---ENPSAIPQHAFKPAGNGQRACIGQQFALHEATLVLGMMLKHF--------DF 423
Query: 496 SETLKLSLEMKKPLTCR 512
+ L++K+ LT +
Sbjct: 424 EDHTNYELDIKETLTLK 440
>pdb|4DU2|B Chain B, Cytochrome P450 Bm3h-B7 Mri Sensor Bound To Dopamine
pdb|4DU2|A Chain A, Cytochrome P450 Bm3h-B7 Mri Sensor Bound To Dopamine
Length = 470
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 59/258 (22%), Positives = 108/258 (41%), Gaps = 25/258 (9%)
Query: 261 KRRCHKLAARVKTLIGQVVEERKKNSGEFNNGGNDFLSALLSLPKEDQLSDADTVAILWE 320
KR+ + + L+ +++ +RK SGE +D L+ +L+ + D I ++
Sbjct: 203 KRQFQEDIKVMNDLVDKIIADRKA-SGE---QSDDLLTHMLNGKDPETGEPLDDENIRYQ 258
Query: 321 MVF---RGTDTVAILLEWIMARIVLH-QDIQTKVQNEIDTWVGRDRHVEDSDISSLPYLQ 376
++ G + + LL + + +V + ++Q + V D + L Y+
Sbjct: 259 IITFLAAGHEATSGLLSFALYFLVKNPHELQKAAEEAARVLV--DPVPSHKQVKQLKYVG 316
Query: 377 AIVKEVLRMHPPGPLLSWARLAVHDVHVDKVF-VPAGTTAMVNMWAITHDPTIWKNP-WT 434
++ E LR+ P P S A D + + + G MV + + D T+W +
Sbjct: 317 MVLNEALRLWPTAPAFSL--YAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTVWGDDVEE 374
Query: 435 FKPERFIEEDVPILGSDLRLAPFGSGRRVCPGKALGLATVHLWLARLLHRFRWLPAEPVD 494
F+PERF + P PFG+G+R C G+ L L L +L F D
Sbjct: 375 FRPERF---ENPSAIPQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHF--------D 423
Query: 495 LSETLKLSLEMKKPLTCR 512
+ L++K+ LT +
Sbjct: 424 FEDHTNYELDIKETLTLK 441
>pdb|4DTW|B Chain B, Cytochrome P450 Bm3h-8c8 Mri Sensor Bound To Serotonin
pdb|4DTW|A Chain A, Cytochrome P450 Bm3h-8c8 Mri Sensor Bound To Serotonin
pdb|4DTY|B Chain B, Cytochrome P450 Bm3h-8c8 Mri Sensor, No Ligand
pdb|4DTY|A Chain A, Cytochrome P450 Bm3h-8c8 Mri Sensor, No Ligand
pdb|4DTZ|A Chain A, Cytochrome P450 Bm3h-8c8 Mri Sensor Bound To Dopamine
pdb|4DTZ|B Chain B, Cytochrome P450 Bm3h-8c8 Mri Sensor Bound To Dopamine
Length = 469
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 60/258 (23%), Positives = 108/258 (41%), Gaps = 25/258 (9%)
Query: 261 KRRCHKLAARVKTLIGQVVEERKKNSGEFNNGGNDFLSALLSLPKEDQLSDADTVAILWE 320
KR+ + + L+ +++ +RK SGE +D L+ +L+ + D I ++
Sbjct: 202 KRQFQEDIKVMNDLVDKIIADRKA-SGE---QSDDLLTHMLNGKDPETGEPLDDENIRYQ 257
Query: 321 MVF---RGTDTVAILLEWIMARIVLH-QDIQTKVQNEIDTWVGRDRHVEDSDISSLPYLQ 376
++ G + + LL + + +V + ++Q + V D + L Y+
Sbjct: 258 IITFLAAGHEATSGLLSFALYFLVKNPHELQKAAEEAARVLV--DPVPSYKQVKQLKYVG 315
Query: 377 AIVKEVLRMHPPGPLLSWARLAVHDVHVDKVF-VPAGTTAMVNMWAITHDPTIWKNP-WT 434
++ E LR+ P P S A D + + + G MV + + D TIW +
Sbjct: 316 MVLNEALRLWPTAPAFSL--YAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEE 373
Query: 435 FKPERFIEEDVPILGSDLRLAPFGSGRRVCPGKALGLATVHLWLARLLHRFRWLPAEPVD 494
F+PERF + P PFG+G+R C G+ L L L +L F D
Sbjct: 374 FRPERF---ENPSAIPQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHF--------D 422
Query: 495 LSETLKLSLEMKKPLTCR 512
+ L++K+ LT +
Sbjct: 423 FEDHTNYELDIKETLTLK 440
>pdb|3SN5|A Chain A, Crystal Structure Of Human Cyp7a1 In Complex With
Cholest-4-En-3-One
pdb|3SN5|B Chain B, Crystal Structure Of Human Cyp7a1 In Complex With
Cholest-4-En-3-One
pdb|3V8D|A Chain A, Crystal Structure Of Human Cyp7a1 In Complex With
7-Ketocholesterol
pdb|3V8D|B Chain B, Crystal Structure Of Human Cyp7a1 In Complex With
7-Ketocholesterol
Length = 491
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 33/132 (25%), Positives = 66/132 (50%), Gaps = 11/132 (8%)
Query: 364 VEDSDISSLPYLQAIVKEVLRMHPPGPLLSWARLAVHDVHVDKVFVPAGTTAMVNMW-AI 422
+ ++++ LP L +I+KE LR+ + A+ +H++ ++ ++ +
Sbjct: 318 LSQAELNDLPVLDSIIKESLRLSSASLNIRTAKEDF-TLHLEDGSYNIRKDDIIALYPQL 376
Query: 423 TH-DPTIWKNPWTFKPERFIEED----VPILGSDLRLA----PFGSGRRVCPGKALGLAT 473
H DP I+ +P TFK +R+++E+ + L+L PFGSG +CPG+ +
Sbjct: 377 MHLDPEIYPDPLTFKYDRYLDENGKTKTTFYCNGLKLKYYYMPFGSGATICPGRLFAIHE 436
Query: 474 VHLWLARLLHRF 485
+ +L +L F
Sbjct: 437 IKQFLILMLSYF 448
>pdb|3DAX|A Chain A, Crystal Structure Of Human Cyp7a1
pdb|3DAX|B Chain B, Crystal Structure Of Human Cyp7a1
Length = 491
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 33/132 (25%), Positives = 66/132 (50%), Gaps = 11/132 (8%)
Query: 364 VEDSDISSLPYLQAIVKEVLRMHPPGPLLSWARLAVHDVHVDKVFVPAGTTAMVNMW-AI 422
+ ++++ LP L +I+KE LR+ + A+ +H++ ++ ++ +
Sbjct: 318 LSQAELNDLPVLDSIIKESLRLSSASLNIRTAKEDF-TLHLEDGSYNIRKDDIIALYPQL 376
Query: 423 TH-DPTIWKNPWTFKPERFIEED----VPILGSDLRLA----PFGSGRRVCPGKALGLAT 473
H DP I+ +P TFK +R+++E+ + L+L PFGSG +CPG+ +
Sbjct: 377 MHLDPEIYPDPLTFKYDRYLDENGKTKTTFYCNGLKLKYYYMPFGSGATICPGRLFAIHE 436
Query: 474 VHLWLARLLHRF 485
+ +L +L F
Sbjct: 437 IKQFLILMLSYF 448
>pdb|3AWP|A Chain A, Cytochrome P450sp Alpha (Cyp152b1) Mutant F288g
Length = 415
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/120 (31%), Positives = 60/120 (50%), Gaps = 14/120 (11%)
Query: 374 YLQAIVKEVLRMHPPGPLLSWARLAVHDVHVDKVFVPAGTTAMVNMWAITHDPTIWKNPW 433
Y + V+EV R +P GP + AR A D + + P G +++++ HD W +P
Sbjct: 273 YAELFVQEVRRFYPFGPAVV-AR-ASQDFEWEGMAFPEGRQVVLDLYGSNHDAATWADPQ 330
Query: 434 TFKPERFI--EED----VPILGSDLRLAPFGSGRRVCPGKALGLATVHLWLARLLHRFRW 487
F+PERF +ED +P G D L G R CPG+ + LA + + L++ R+
Sbjct: 331 EFRPERFRAWDEDSFNFIPQGGGDHYL-----GHR-CPGEWIVLAIMKVAAHLLVNAMRY 384
>pdb|3R9C|A Chain A, Crystal Structure Of Mycobacterium Smegmatis Cyp164a2 With
Econazole Bound
pdb|3R9B|A Chain A, Crystal Structure Of Mycobacterium Smegmatis Cyp164a2 In
Ligand Free State
pdb|3R9B|B Chain B, Crystal Structure Of Mycobacterium Smegmatis Cyp164a2 In
Ligand Free State
pdb|3R9B|C Chain C, Crystal Structure Of Mycobacterium Smegmatis Cyp164a2 In
Ligand Free State
Length = 418
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 90/209 (43%), Gaps = 37/209 (17%)
Query: 278 VVEERKKNSGEFNNGGNDFLSALLSLPKE-DQLSDADTVAILWEMVFRGTDTVAILLEWI 336
+++ER++ GE D +S L+++ + DQL++ + +A ++ G +T L+
Sbjct: 215 LIDERRRTPGE------DLMSGLVAVEESGDQLTEDEIIATCNLLLIAGHETTVNLI--- 265
Query: 337 MARIVLHQDIQTKVQNEIDTWVGRDRHVEDSDISSLPYLQAIVKEVLRMHPPGPLLSWAR 396
A L ++T Q W D +S A+++E +R PP L+S R
Sbjct: 266 -ANAALAM-LRTPGQ-----WAAL---AADGSRAS-----AVIEETMRYDPPVQLVS--R 308
Query: 397 LAVHDVHVDKVFVPAGTTAMVNMWAITHDPTIWKNPWTFKPERFIEEDVPILGSDLRLAP 456
A D+ + VP G T ++ + A DPTI P F P+R + +R
Sbjct: 309 YAGDDLTIGTHTVPKGDTMLLLLAAAHRDPTIVGAPDRFDPDR----------AQIRHLG 358
Query: 457 FGSGRRVCPGKALGLATVHLWLARLLHRF 485
FG G C G L + L L RF
Sbjct: 359 FGKGAHFCLGAPLARLEATVALPALAARF 387
>pdb|3P3L|A Chain A, Crystal Structure Of The Cytochrome P450 Monooxygenase
Aurh (Wildtype) From Streptomyces Thioluteus
pdb|3P3L|B Chain B, Crystal Structure Of The Cytochrome P450 Monooxygenase
Aurh (Wildtype) From Streptomyces Thioluteus
Length = 406
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 67/321 (20%), Positives = 125/321 (38%), Gaps = 53/321 (16%)
Query: 150 SGKYWRHLRRIAANHMFSPRRISGLEILRQRLADEMLSKVNQQMENKGVVRVREVLQKGS 209
G R LR +A H F+PRRI+ ++ + ++++ K+ Q G
Sbjct: 94 DGADHRRLRGLA-THPFTPRRITAVQPFVRSTVEQLIDKLPQ----------------GD 136
Query: 210 LGNILESLFGGSVISLKKEELEAMVKEGYELIAQFNWEDYFPLNLLDFYGVKRRCHKLAA 269
+ F + +L +L E Y+ + + + E L L + + + +
Sbjct: 137 FDFVQH--FAHPLPALVMCQLLGFPLEDYDTVGRLSIETNLGLALSNDQDILVKVEQGLG 194
Query: 270 RVKTLIGQVVEERKKNSGEFNNGGNDFLSALLSLPKEDQLSDADTVAILWEMVFRGTDTV 329
R+ + +E+RK G +D S ++ + L D + ++ ++ G +T
Sbjct: 195 RMFDYLVAAIEKRKVEPG------DDLTSDIVRAFHDGVLDDYELRTLVATVLVAGYETT 248
Query: 330 AILLEWIMARIVLHQDIQTKVQNEIDTWVGRDRHVEDSDISSLPYLQAIVKEVLRMHPPG 389
L M H D K++ E+ +++ QA V+EVLR P
Sbjct: 249 NHQLALAMYDFAQHPDQWMKIK-------------ENPELAP----QA-VEEVLRWSPTL 290
Query: 390 PLLSWARLAVHDVHVDKVFVPAGTTAMVNMWAITHDPTIWKNPWTFKPERFIEEDVPILG 449
P+ + R+A D V+ V +P GT + DP ++ + F + ++ + P +
Sbjct: 291 PVTA-TRVAAEDFEVNGVRIPTGTPVFMCAHVAHRDPRVFADADRF--DITVKREAPSIA 347
Query: 450 SDLRLAPFGSGRRVCPGKALG 470
FG G C G AL
Sbjct: 348 -------FGGGPHFCLGTALA 361
>pdb|1GWI|A Chain A, The 1.92 A Structure Of Streptomyces Coelicolor A3(2)
Cyp154c1: A New Monooxygenase That Functionalizes
Macrolide Ring Systems
pdb|1GWI|B Chain B, The 1.92 A Structure Of Streptomyces Coelicolor A3(2)
Cyp154c1: A New Monooxygenase That Functionalizes
Macrolide Ring Systems
Length = 411
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 77/202 (38%), Gaps = 38/202 (18%)
Query: 293 GNDFLSALLSLPKE-DQLSDADTVAILWEMVFRGTDTVAILLEWIMARIVLHQDIQTKVQ 351
G+D SAL+ + D L+DA+ V+ L MV G +T L+ + + H + + V
Sbjct: 210 GDDLTSALIQASENGDHLTDAEIVSTLQLMVAAGHETTISLIVNAVVNLSTHPEQRALVL 269
Query: 352 NEIDTWVGRDRHVEDSDISSLPYLQAIVKEVLRMHPPGPLLSWARLAVHDVHVDKVFVPA 411
+ W A+V+E LR P + R A DV V +PA
Sbjct: 270 SGEAEW------------------SAVVEETLRFSTPTSHV-LIRFAAEDVPVGDRVIPA 310
Query: 412 GTTAMVNMWAI-----THDPTIWKNPWTFKPERFIEEDVPILGSDLRLAPFGSGRRVCPG 466
G +V+ A+ H PT + T S R FG G VCPG
Sbjct: 311 GDALIVSYGALGRDERAHGPTADRFDLTRT-------------SGNRHISFGHGPHVCPG 357
Query: 467 KALGLATVHLWLARLLHRFRWL 488
AL + L L RF L
Sbjct: 358 AALSRMEAGVALPALYARFPHL 379
>pdb|1N97|A Chain A, Crystal Stucture Of Cyp175a1 From Thermus Thermophillus
Strain Hb27
pdb|1N97|B Chain B, Crystal Stucture Of Cyp175a1 From Thermus Thermophillus
Strain Hb27
Length = 389
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 53/192 (27%), Positives = 81/192 (42%), Gaps = 35/192 (18%)
Query: 300 LLSLPKEDQLSDADTVAILWEMVFRGTDTVAILLEWIMARIVLHQDIQTKVQNEIDTWVG 359
L LP+E LS+A T+ + G +TVA L W + D Q +V +
Sbjct: 203 LSHLPRERALSEAVTLLVA------GHETVASALTWSFLLLSHRPDWQKRVAESEEA--- 253
Query: 360 RDRHVEDSDISSLPYLQAIVKEVLRMHPPGPLLSWARLAVHDVHVDKVFVPAGTTAMVNM 419
A +E LR++PP +L+ R + + + +P GTT +++
Sbjct: 254 ---------------ALAAFQEALRLYPPAWILT--RRLERPLLLGEDRLPPGTTLVLSP 296
Query: 420 WAIT--HDPTIWKNPWTFKPERFIEEDVPILGSDLRLAPFGSGRRVCPGKALGLATVHLW 477
+ H P + F+PERF+EE G R PFG G+R+C G+ L +
Sbjct: 297 YVTQRLHFP----DGEAFRPERFLEERGTPSG---RYFPFGLGQRLCLGRDFALLEGPIV 349
Query: 478 LARLLHRFRWLP 489
L RFR P
Sbjct: 350 LRAFFRRFRLDP 361
>pdb|3VNO|A Chain A, Cytochrome P450sp Alpha (cyp152b1) Mutant R241e
Length = 407
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 59/120 (49%), Gaps = 14/120 (11%)
Query: 374 YLQAIVKEVLRMHPPGPLLSWARLAVHDVHVDKVFVPAGTTAMVNMWAITHDPTIWKNPW 433
Y + V+EV R +P P + AR A D + + P G +++++ HD W +P
Sbjct: 265 YAELFVQEVRRFYPFFPAVV-AR-ASQDFEWEGMAFPEGRQVVLDLYGSNHDAATWADPQ 322
Query: 434 TFKPERFI--EED----VPILGSDLRLAPFGSGRRVCPGKALGLATVHLWLARLLHRFRW 487
F+PERF +ED +P G D L G R CPG+ + LA + + L++ R+
Sbjct: 323 EFRPERFRAWDEDSFNFIPQGGGDHYL-----GHR-CPGEWIVLAIMKVAAHLLVNAMRY 376
>pdb|3VOO|A Chain A, Cytochrome P450sp Alpha (cyp152b1) Mutant A245e
Length = 407
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 59/120 (49%), Gaps = 14/120 (11%)
Query: 374 YLQAIVKEVLRMHPPGPLLSWARLAVHDVHVDKVFVPAGTTAMVNMWAITHDPTIWKNPW 433
Y + V+EV R +P P + AR A D + + P G +++++ HD W +P
Sbjct: 265 YAELFVQEVRRFYPFFPAVV-AR-ASQDFEWEGMAFPEGRQVVLDLYGSNHDAATWADPQ 322
Query: 434 TFKPERFI--EED----VPILGSDLRLAPFGSGRRVCPGKALGLATVHLWLARLLHRFRW 487
F+PERF +ED +P G D L G R CPG+ + LA + + L++ R+
Sbjct: 323 EFRPERFRAWDEDSFNFIPQGGGDHYL-----GHR-CPGEWIVLAIMKVAAHLLVNAMRY 376
>pdb|3VM4|A Chain A, Cytochrome P450sp Alpha (Cyp152b1) In Complex With
(R)-Ibuprophen
Length = 407
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 59/120 (49%), Gaps = 14/120 (11%)
Query: 374 YLQAIVKEVLRMHPPGPLLSWARLAVHDVHVDKVFVPAGTTAMVNMWAITHDPTIWKNPW 433
Y + V+EV R +P P + AR A D + + P G +++++ HD W +P
Sbjct: 265 YAELFVQEVRRFYPFFPAVV-AR-ASQDFEWEGMAFPEGRQVVLDLYGSNHDAATWADPQ 322
Query: 434 TFKPERFI--EED----VPILGSDLRLAPFGSGRRVCPGKALGLATVHLWLARLLHRFRW 487
F+PERF +ED +P G D L G R CPG+ + LA + + L++ R+
Sbjct: 323 EFRPERFRAWDEDSFNFIPQGGGDHYL-----GHR-CPGEWIVLAIMKVAAHLLVNAMRY 376
>pdb|3P3O|A Chain A, Crystal Structure Of The Cytochrome P450 Monooxygenase
Aurh (Ntermii) From Streptomyces Thioluteus
pdb|3P3X|A Chain A, Crystal Structure Of The Cytochrome P450 Monooxygenase
Aurh (Nterm- Aurh-I) From Streptomyces Thioluteus
pdb|3P3X|B Chain B, Crystal Structure Of The Cytochrome P450 Monooxygenase
Aurh (Nterm- Aurh-I) From Streptomyces Thioluteus
pdb|3P3Z|A Chain A, Crystal Structure Of The Cytochrome P450 Monooxygenase
Aurh From Streptomyces Thioluteus In Complex With
Ancymidol
Length = 416
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 67/321 (20%), Positives = 125/321 (38%), Gaps = 53/321 (16%)
Query: 150 SGKYWRHLRRIAANHMFSPRRISGLEILRQRLADEMLSKVNQQMENKGVVRVREVLQKGS 209
G R LR +A H F+PRRI+ ++ + ++++ K+ Q G
Sbjct: 104 DGADHRRLRGLA-THPFTPRRITAVQPFVRSTVEQLIDKLPQ----------------GD 146
Query: 210 LGNILESLFGGSVISLKKEELEAMVKEGYELIAQFNWEDYFPLNLLDFYGVKRRCHKLAA 269
+ F + +L +L E Y+ + + + E L L + + + +
Sbjct: 147 FDFVQH--FPHPLPALVMCQLLGFPLEDYDTVGRLSIETNLGLALSNDQDILVKVEQGLG 204
Query: 270 RVKTLIGQVVEERKKNSGEFNNGGNDFLSALLSLPKEDQLSDADTVAILWEMVFRGTDTV 329
R+ + +E+RK G +D S ++ + L D + ++ ++ G +T
Sbjct: 205 RMFDYLVAAIEKRKVEPG------DDLTSDIVRAFHDGVLDDYELRTLVATVLVAGYETT 258
Query: 330 AILLEWIMARIVLHQDIQTKVQNEIDTWVGRDRHVEDSDISSLPYLQAIVKEVLRMHPPG 389
L M H D K++ E+ +++ QA V+EVLR P
Sbjct: 259 NHQLALAMYDFAQHPDQWMKIK-------------ENPELAP----QA-VEEVLRWSPTL 300
Query: 390 PLLSWARLAVHDVHVDKVFVPAGTTAMVNMWAITHDPTIWKNPWTFKPERFIEEDVPILG 449
P+ + R+A D V+ V +P GT + DP ++ + F + ++ + P +
Sbjct: 301 PVTA-TRVAAEDFEVNGVRIPTGTPVFMCAHVAHRDPRVFADADRF--DITVKREAPSIA 357
Query: 450 SDLRLAPFGSGRRVCPGKALG 470
FG G C G AL
Sbjct: 358 -------FGGGPHFCLGTALA 371
>pdb|3AWQ|A Chain A, Cytochrome P450sp Alpha (Cyp152b1) Mutant L78f
Length = 415
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 59/120 (49%), Gaps = 14/120 (11%)
Query: 374 YLQAIVKEVLRMHPPGPLLSWARLAVHDVHVDKVFVPAGTTAMVNMWAITHDPTIWKNPW 433
Y + V+EV R +P P + AR A D + + P G +++++ HD W +P
Sbjct: 273 YAELFVQEVRRFYPFFPAVV-AR-ASQDFEWEGMAFPEGRQVVLDLYGSNHDAATWADPQ 330
Query: 434 TFKPERFI--EED----VPILGSDLRLAPFGSGRRVCPGKALGLATVHLWLARLLHRFRW 487
F+PERF +ED +P G D L G R CPG+ + LA + + L++ R+
Sbjct: 331 EFRPERFRAWDEDSFNFIPQGGGDHYL-----GHR-CPGEWIVLAIMKVAAHLLVNAMRY 384
>pdb|3AWM|A Chain A, Cytochrome P450sp Alpha (Cyp152b1) Wild-Type With Palmitic
Acid
Length = 415
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 59/120 (49%), Gaps = 14/120 (11%)
Query: 374 YLQAIVKEVLRMHPPGPLLSWARLAVHDVHVDKVFVPAGTTAMVNMWAITHDPTIWKNPW 433
Y + V+EV R +P P + AR A D + + P G +++++ HD W +P
Sbjct: 273 YAELFVQEVRRFYPFFPAVV-AR-ASQDFEWEGMAFPEGRQVVLDLYGSNHDAATWADPQ 330
Query: 434 TFKPERFI--EED----VPILGSDLRLAPFGSGRRVCPGKALGLATVHLWLARLLHRFRW 487
F+PERF +ED +P G D L G R CPG+ + LA + + L++ R+
Sbjct: 331 EFRPERFRAWDEDSFNFIPQGGGDHYL-----GHR-CPGEWIVLAIMKVAAHLLVNAMRY 384
>pdb|2WIV|A Chain A, Cytochrome-P450 Xpla Heme Domain P21
pdb|2WIV|B Chain B, Cytochrome-P450 Xpla Heme Domain P21
pdb|2WIY|A Chain A, Cytochrome P450 Xpla Heme Domain P21212
Length = 394
Score = 45.4 bits (106), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 33/109 (30%), Positives = 47/109 (43%), Gaps = 10/109 (9%)
Query: 377 AIVKEVLRMHPPGPLLSWARLAVHDVHVDKVFVPAGTTAMVNMWAITHDPTIWKNPWTFK 436
AI+ E++RM PP LS+ R DV + V + AG+ + A DP ++ +P F
Sbjct: 268 AIINEMVRMDPPQ--LSFLRFPTEDVEIGGVLIEAGSPIRFMIGAANRDPEVFDDPDVFD 325
Query: 437 PERFIEEDVPILGSDLRLAPFGSGRRVCPGKALGLATVHLWLARLLHRF 485
R P S R FG G C G+ + A A L R+
Sbjct: 326 HTR------PPAAS--RNLSFGLGPHSCAGQIISRAEATTVFAVLAERY 366
>pdb|4EP6|A Chain A, Crystal Structure Of The Xpla Heme Domain In Complex With
Imidazole And Peg
Length = 392
Score = 45.4 bits (106), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 33/109 (30%), Positives = 47/109 (43%), Gaps = 10/109 (9%)
Query: 377 AIVKEVLRMHPPGPLLSWARLAVHDVHVDKVFVPAGTTAMVNMWAITHDPTIWKNPWTFK 436
AI+ E++RM PP LS+ R DV + V + AG+ + A DP ++ +P F
Sbjct: 266 AIINEMVRMDPPQ--LSFLRFPTEDVEIGGVLIEAGSPIRFMIGAANRDPEVFDDPDVFD 323
Query: 437 PERFIEEDVPILGSDLRLAPFGSGRRVCPGKALGLATVHLWLARLLHRF 485
R P S R FG G C G+ + A A L R+
Sbjct: 324 HTR------PPAAS--RNLSFGLGPHSCAGQIISRAEATTVFAVLAERY 364
>pdb|3EJB|B Chain B, Crystal Structure Of P450bioi In Complex With
Tetradecanoic Acid Ligated Acyl Carrier Protein
pdb|3EJB|D Chain D, Crystal Structure Of P450bioi In Complex With
Tetradecanoic Acid Ligated Acyl Carrier Protein
pdb|3EJB|F Chain F, Crystal Structure Of P450bioi In Complex With
Tetradecanoic Acid Ligated Acyl Carrier Protein
pdb|3EJB|H Chain H, Crystal Structure Of P450bioi In Complex With
Tetradecanoic Acid Ligated Acyl Carrier Protein
pdb|3EJD|B Chain B, Crystal Structure Of P450bioi In Complex With Hexadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
pdb|3EJD|D Chain D, Crystal Structure Of P450bioi In Complex With Hexadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
pdb|3EJD|F Chain F, Crystal Structure Of P450bioi In Complex With Hexadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
pdb|3EJD|H Chain H, Crystal Structure Of P450bioi In Complex With Hexadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
pdb|3EJE|B Chain B, Crystal Structure Of P450bioi In Complex With Octadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
pdb|3EJE|D Chain D, Crystal Structure Of P450bioi In Complex With Octadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
pdb|3EJE|F Chain F, Crystal Structure Of P450bioi In Complex With Octadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
pdb|3EJE|H Chain H, Crystal Structure Of P450bioi In Complex With Octadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
Length = 404
Score = 45.4 bits (106), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 47/218 (21%), Positives = 90/218 (41%), Gaps = 36/218 (16%)
Query: 267 LAARVKTLIGQVVEERKKNSGEFNNGGNDFLSALLSLPKEDQLSDADTVAILWEMVFRGT 326
+A + +++++RK++ + D +S LL ++D+L++ + + + G
Sbjct: 183 MAVQAMAYFKELIQKRKRHPQQ------DMISMLLKGREKDKLTEEEAASTCILLAIAGH 236
Query: 327 DTVAILLEWIMARIVLHQDIQTKVQNEIDTWVGRDRHVEDSDISSLPYLQAIVKEVLRMH 386
+T L+ + ++ H + K++ E+ D+ + V+E LR
Sbjct: 237 ETTVNLISNSVLCLLQHPEQLLKLR-------------ENPDL-----IGTAVEECLRYE 278
Query: 387 PPGPLLSWARLAVHDVHVDKVFVPAGTTAMVNMWAITHDPTIWKNPWTFKPERFIEEDVP 446
P + AR+A D+ + V + G + + A DP+I+ NP F R P
Sbjct: 279 SPTQMT--ARVASEDIDICGVTIRQGEQVYLLLGAANRDPSIFTNPDVFDITR---SPNP 333
Query: 447 ILGSDLRLAPFGSGRRVCPGKALGLATVHLWLARLLHR 484
L FG G VC G +L + + LL R
Sbjct: 334 HLS-------FGHGHHVCLGSSLARLEAQIAINTLLQR 364
>pdb|3CXV|A Chain A, Crystal Structure Of The Cytochrome P450 Cyp121 A233g
Mutant From Mycobacterium Tuberculosis
Length = 396
Score = 45.4 bits (106), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 41/125 (32%), Positives = 58/125 (46%), Gaps = 19/125 (15%)
Query: 375 LQAIVKEVLRMHPPGPLLSWA----RLAVHDVHVDKVFVPAGTTAMVNMWAITHDPTIWK 430
+ A V+E+LR++ LS+A RLA D+ V V V G +V + DP +
Sbjct: 266 IPAGVEELLRIN-----LSFADGLPRLATADIQVGDVLVRKGELVLVLLEGANFDPEHFP 320
Query: 431 NPWTFKPERFIEEDVPILGSDLRLAPFGSGRRVCPGKALGLATVHLWLARLLHRFRWLP- 489
NP + IE D P S L FG G+ CPG ALG + + LL + +
Sbjct: 321 NPGS------IELDRPNPTSHLA---FGRGQHFCPGSALGRRHAQIGIEALLKKMPGVDL 371
Query: 490 AEPVD 494
A P+D
Sbjct: 372 AVPID 376
>pdb|1N40|A Chain A, Atomic Structure Of Cyp121, A Mycobacterial P450
pdb|1N4G|A Chain A, Structure Of Cyp121, A Mycobacterial P450, In Complex With
Iodopyrazole
pdb|2IJ5|A Chain A, Crystal Structure Of Cytochrome P450 Cyp121, P212121 Space
Group
pdb|2IJ5|B Chain B, Crystal Structure Of Cytochrome P450 Cyp121, P212121 Space
Group
pdb|2IJ5|C Chain C, Crystal Structure Of Cytochrome P450 Cyp121, P212121 Space
Group
pdb|2IJ5|D Chain D, Crystal Structure Of Cytochrome P450 Cyp121, P212121 Space
Group
pdb|2IJ5|E Chain E, Crystal Structure Of Cytochrome P450 Cyp121, P212121 Space
Group
pdb|2IJ5|F Chain F, Crystal Structure Of Cytochrome P450 Cyp121, P212121 Space
Group
pdb|2IJ7|A Chain A, Structure Of Mycobacterium Tuberculosis Cyp121 In Complex
With The Antifungal Drug Fluconazole
pdb|2IJ7|B Chain B, Structure Of Mycobacterium Tuberculosis Cyp121 In Complex
With The Antifungal Drug Fluconazole
pdb|2IJ7|C Chain C, Structure Of Mycobacterium Tuberculosis Cyp121 In Complex
With The Antifungal Drug Fluconazole
pdb|2IJ7|D Chain D, Structure Of Mycobacterium Tuberculosis Cyp121 In Complex
With The Antifungal Drug Fluconazole
pdb|2IJ7|E Chain E, Structure Of Mycobacterium Tuberculosis Cyp121 In Complex
With The Antifungal Drug Fluconazole
pdb|2IJ7|F Chain F, Structure Of Mycobacterium Tuberculosis Cyp121 In Complex
With The Antifungal Drug Fluconazole
pdb|3G5F|A Chain A, Crystallographic Analysis Of Cytochrome P450 Cyp121
pdb|3G5H|A Chain A, Crystallographic Analysis Of Cytochrome P450 Cyp121
pdb|4G44|A Chain A, Structure Of P450 Cyp121 In Complex With Lead Compound
Mb286, 3-((1h- 1,2,4-Triazol-1-Yl)methyl)aniline
pdb|4G45|A Chain A, Structure Of Cytochrome Cyp121 In Complex With
2-Methylquinolin-6- Amine
pdb|4G46|A Chain A, Structure Of Cytochrome P450 Cyp121 In Complex With
4-Oxo-4,5,6,7- Tetrahydrobenzofuran-3-Carboxylate
pdb|4G47|A Chain A, Structure Of Cytochrome P450 Cyp121 In Complex With
4-(1h-1,2,4- Triazol-1-Yl)phenol
pdb|4G48|A Chain A, Structure Of Cyp121 In Complex With
4-(4-Phenoxy-1h-Pyrazol-3-Yl) Benzene-1,3-Diol
Length = 396
Score = 45.4 bits (106), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 41/125 (32%), Positives = 58/125 (46%), Gaps = 19/125 (15%)
Query: 375 LQAIVKEVLRMHPPGPLLSWA----RLAVHDVHVDKVFVPAGTTAMVNMWAITHDPTIWK 430
+ A V+E+LR++ LS+A RLA D+ V V V G +V + DP +
Sbjct: 266 IPAGVEELLRIN-----LSFADGLPRLATADIQVGDVLVRKGELVLVLLEGANFDPEHFP 320
Query: 431 NPWTFKPERFIEEDVPILGSDLRLAPFGSGRRVCPGKALGLATVHLWLARLLHRFRWLP- 489
NP + IE D P S L FG G+ CPG ALG + + LL + +
Sbjct: 321 NPGS------IELDRPNPTSHLA---FGRGQHFCPGSALGRRHAQIGIEALLKKMPGVDL 371
Query: 490 AEPVD 494
A P+D
Sbjct: 372 AVPID 376
>pdb|4G1X|A Chain A, Crystal Structure Of Mycobacterium Tuberculosis Cyp121 In
Complex With 4-(1h-1,2,4-Triazol-1-Yl)quinolin-6-Amine
pdb|4G2G|A Chain A, Crystal Structure Of Mycobacterium Tuberculosis Cyp121 In
Complex With 4,4'-(1h-1,2,3-Triazole-1,5-Diyl)diphenol
Length = 395
Score = 45.1 bits (105), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 41/125 (32%), Positives = 58/125 (46%), Gaps = 19/125 (15%)
Query: 375 LQAIVKEVLRMHPPGPLLSWA----RLAVHDVHVDKVFVPAGTTAMVNMWAITHDPTIWK 430
+ A V+E+LR++ LS+A RLA D+ V V V G +V + DP +
Sbjct: 265 IPAGVEELLRIN-----LSFADGLPRLATADIQVGDVLVRKGELVLVLLEGANFDPEHFP 319
Query: 431 NPWTFKPERFIEEDVPILGSDLRLAPFGSGRRVCPGKALGLATVHLWLARLLHRFRWLP- 489
NP + IE D P S L FG G+ CPG ALG + + LL + +
Sbjct: 320 NPGS------IELDRPNPTSHLA---FGRGQHFCPGSALGRRHAQIGIEALLKKMPGVDL 370
Query: 490 AEPVD 494
A P+D
Sbjct: 371 AVPID 375
>pdb|3CXZ|A Chain A, Crystal Structure Of Cytochrome P450 Cyp121 R386l Mutant
From M. Tuberculosis
Length = 396
Score = 45.1 bits (105), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 41/125 (32%), Positives = 58/125 (46%), Gaps = 19/125 (15%)
Query: 375 LQAIVKEVLRMHPPGPLLSWA----RLAVHDVHVDKVFVPAGTTAMVNMWAITHDPTIWK 430
+ A V+E+LR++ LS+A RLA D+ V V V G +V + DP +
Sbjct: 266 IPAGVEELLRIN-----LSFADGLPRLATADIQVGDVLVRKGELVLVLLEGANFDPEHFP 320
Query: 431 NPWTFKPERFIEEDVPILGSDLRLAPFGSGRRVCPGKALGLATVHLWLARLLHRFRWLP- 489
NP + IE D P S L FG G+ CPG ALG + + LL + +
Sbjct: 321 NPGS------IELDRPNPTSHLA---FGRGQHFCPGSALGRRHAQIGIEALLKKMPGVDL 371
Query: 490 AEPVD 494
A P+D
Sbjct: 372 AVPID 376
>pdb|3CY0|A Chain A, Crystal Structure Of Cytochrome P450 Cyp121 S237a Mutant
From Mycobacterium Tuberculosis
Length = 396
Score = 45.1 bits (105), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 41/125 (32%), Positives = 58/125 (46%), Gaps = 19/125 (15%)
Query: 375 LQAIVKEVLRMHPPGPLLSWA----RLAVHDVHVDKVFVPAGTTAMVNMWAITHDPTIWK 430
+ A V+E+LR++ LS+A RLA D+ V V V G +V + DP +
Sbjct: 266 IPAGVEELLRIN-----LSFADGLPRLATADIQVGDVLVRKGELVLVLLEGANFDPEHFP 320
Query: 431 NPWTFKPERFIEEDVPILGSDLRLAPFGSGRRVCPGKALGLATVHLWLARLLHRFRWLP- 489
NP + IE D P S L FG G+ CPG ALG + + LL + +
Sbjct: 321 NPGS------IELDRPNPTSHLA---FGRGQHFCPGSALGRRHAQIGIEALLKKMPGVDL 371
Query: 490 AEPVD 494
A P+D
Sbjct: 372 AVPID 376
>pdb|1WIY|A Chain A, Crystal Structure Analysis Of A 6-Coordinated Cytochorome
P450 From Thermus Thermophilus Hb8
pdb|1WIY|B Chain B, Crystal Structure Analysis Of A 6-Coordinated Cytochorome
P450 From Thermus Thermophilus Hb8
Length = 389
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 77/187 (41%), Gaps = 31/187 (16%)
Query: 303 LPKEDQLSDADTVAILWEMVFRGTDTVAILLEWIMARIVLHQDIQTKVQNEIDTWVGRDR 362
LP+E LS+A T+ + G +TVA L W + D Q +V +
Sbjct: 206 LPRERALSEAVTLLVA------GHETVASALTWSFLLLSHRPDWQKRVAESEEA------ 253
Query: 363 HVEDSDISSLPYLQAIVKEVLRMHPPGPLLSWARLAVHDVHVDKVFVPAGTTAMVNMWAI 422
A +E LR++PP +L+ R + + + +P GTT +++ +
Sbjct: 254 ------------ALAAFQEALRLYPPAWILT--RRLERPLLLGEDRLPQGTTLVLSPYVT 299
Query: 423 THDPTIWKNPWTFKPERFIEEDVPILGSDLRLAPFGSGRRVCPGKALGLATVHLWLARLL 482
+ F+PERF+ E G R PFG G+R+C G+ L + L
Sbjct: 300 QR--LYFPEGEAFQPERFLAERGTPSG---RYFPFGLGQRLCLGRDFALLEGPIVLRAFF 354
Query: 483 HRFRWLP 489
RFR P
Sbjct: 355 RRFRLDP 361
>pdb|3CY1|A Chain A, Crystal Structure Of The Cytochrome P450 Cyp121 S279a
Mutant From M. Tuberculosis
Length = 396
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/125 (32%), Positives = 58/125 (46%), Gaps = 19/125 (15%)
Query: 375 LQAIVKEVLRMHPPGPLLSWA----RLAVHDVHVDKVFVPAGTTAMVNMWAITHDPTIWK 430
+ A V+E+LR++ L++A RLA D+ V V V G +V + DP +
Sbjct: 266 IPAGVEELLRIN-----LAFADGLPRLATADIQVGDVLVRKGELVLVLLEGANFDPEHFP 320
Query: 431 NPWTFKPERFIEEDVPILGSDLRLAPFGSGRRVCPGKALGLATVHLWLARLLHRFRWLP- 489
NP + IE D P S L FG G+ CPG ALG + + LL + +
Sbjct: 321 NPGS------IELDRPNPTSHLA---FGRGQHFCPGSALGRRHAQIGIEALLKKMPGVDL 371
Query: 490 AEPVD 494
A P+D
Sbjct: 372 AVPID 376
>pdb|3DAM|A Chain A, Crystal Structure Of Allene Oxide Synthase
pdb|3DAN|A Chain A, Crystal Structure Of Allene Oxide Synthase
pdb|3DBM|A Chain A, Crystal Structure Of Allene Oxide Synthase
Length = 473
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 54/243 (22%), Positives = 100/243 (41%), Gaps = 45/243 (18%)
Query: 260 VKRRCHKLAARVKTLIGQVVEERKKNSGEFNNGGNDFLSALLSLPKEDQLSDADTVAILW 319
+K +KL +++ V+E+ +K L +PK++ + + IL+
Sbjct: 233 IKSTYNKLYDYFQSVATPVMEQAEK----------------LGVPKDEAVHN-----ILF 271
Query: 320 EMVFRGTDTVAIL----LEWI-MARIVLHQDIQTKVQNEIDTWVGRDRHVEDSDISSLPY 374
+ F V IL L+WI +A LH + +++ I ++ D +V I +P
Sbjct: 272 AVCFNTFGGVKILFPNTLKWIGLAGENLHTQLAEEIRGAIKSY--GDGNVTLEAIEQMPL 329
Query: 375 LQAIVKEVLRMHPP-----GPLLSWARLAVHDVHVDKVFVPAGTTAMVNMWAITHDPTIW 429
+++V E LR+ PP G S + HD + V G T DP ++
Sbjct: 330 TKSVVYESLRIEPPVPPQYGKAKSNFTIESHDATFE---VKKGEMLFGYQPFATKDPKVF 386
Query: 430 KNPWTFKPERFIEEDVPIL-------GSDLRLAPFGSGRRVCPGKALGLATVHLWLARLL 482
P + P+RF+ + +L G + +P ++ C GK + L++ L
Sbjct: 387 DRPEEYVPDRFVGDGEALLKYVWWSNGPETE-SPTVENKQ-CAGKDFVVLITRLFVIELF 444
Query: 483 HRF 485
R+
Sbjct: 445 RRY 447
>pdb|1EGY|A Chain A, Cytochrome P450eryf With 9-Aminophenanthrene Bound
pdb|1EUP|A Chain A, X-Ray Crystal Structure Of Cytochrome P450eryf With
Androstendione Bound
pdb|1JIN|A Chain A, P450eryfKETOCONAZOLE
pdb|1OXA|A Chain A, Cytochrome P450 (Donor:o2 Oxidoreductase)
Length = 403
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 57/224 (25%), Positives = 90/224 (40%), Gaps = 42/224 (18%)
Query: 266 KLAARVKTLIGQVVEERKKNSGEFNNGGNDFLSALLSLPKED--QLSDADTVAILWEMVF 323
+ A V I +VE R+ G +D LSAL+S+ +D +LS + +I ++
Sbjct: 186 QAAREVVNFILDLVERRRTEPG------DDLLSALISVQDDDDGRLSADELTSIALVLLL 239
Query: 324 RGTDTVAILLEWIMARIVLHQDIQTKVQNEIDTWVGRDRHVEDSDISSLPYLQAIVKEVL 383
G + L+ ++ H D V+ +D S+LP V+E+L
Sbjct: 240 AGFEASVSLIGIGTYLLLTHPDQLALVR---------------ADPSALPN---AVEEIL 281
Query: 384 R-MHPPGPLLSWARLAVHDVHVDKVFVPAGTTAMVNMWAITHDPTIWKNPWTFKPERFIE 442
R + PP + R A +V + V +P +T +V A DP+ + +P F R
Sbjct: 282 RYIAPPE---TTTRFAAEEVEIGGVAIPQYSTVLVANGAANRDPSQFPDPHRFDVTR--- 335
Query: 443 EDVPILGSDLR-LAPFGSGRRVCPGKALGLATVHLWLARLLHRF 485
D R FG G C G+ L + L L RF
Sbjct: 336 --------DTRGHLSFGQGIHFCMGRPLAKLEGEVALRALFGRF 371
>pdb|3CXX|A Chain A, Crystal Structure Of Cytochrome P450 Cyp121 F338h From M.
Tuberculosis
Length = 396
Score = 42.0 bits (97), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 40/125 (32%), Positives = 57/125 (45%), Gaps = 19/125 (15%)
Query: 375 LQAIVKEVLRMHPPGPLLSWA----RLAVHDVHVDKVFVPAGTTAMVNMWAITHDPTIWK 430
+ A V+E+LR++ LS+A RLA D+ V V V G +V + DP +
Sbjct: 266 IPAGVEELLRIN-----LSFADGLPRLATADIQVGDVLVRKGELVLVLLEGANFDPEHFP 320
Query: 431 NPWTFKPERFIEEDVPILGSDLRLAPFGSGRRVCPGKALGLATVHLWLARLLHRFRWLP- 489
NP + IE D P S L G G+ CPG ALG + + LL + +
Sbjct: 321 NPGS------IELDRPNPTSHLA---HGRGQHFCPGSALGRRHAQIGIEALLKKMPGVDL 371
Query: 490 AEPVD 494
A P+D
Sbjct: 372 AVPID 376
>pdb|3CXY|A Chain A, Crystal Structure Of The Cytochrome P450 Cyp121 P346l
Mutant From M. Tuberculosis
Length = 396
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/125 (32%), Positives = 57/125 (45%), Gaps = 19/125 (15%)
Query: 375 LQAIVKEVLRMHPPGPLLSWA----RLAVHDVHVDKVFVPAGTTAMVNMWAITHDPTIWK 430
+ A V+E+LR++ LS+A RLA D+ V V V G +V + DP +
Sbjct: 266 IPAGVEELLRIN-----LSFADGLPRLATADIQVGDVLVRKGELVLVLLEGANFDPEHFP 320
Query: 431 NPWTFKPERFIEEDVPILGSDLRLAPFGSGRRVCPGKALGLATVHLWLARLLHRFRWLP- 489
NP + IE D P S L FG G+ C G ALG + + LL + +
Sbjct: 321 NPGS------IELDRPNPTSHLA---FGRGQHFCLGSALGRRHAQIGIEALLKKMPGVDL 371
Query: 490 AEPVD 494
A P+D
Sbjct: 372 AVPID 376
>pdb|2Z36|A Chain A, Crystal Structure Of Cytochrome P450 Moxa From Nonomuraea
Recticatena (Cyp105)
pdb|2Z36|B Chain B, Crystal Structure Of Cytochrome P450 Moxa From Nonomuraea
Recticatena (Cyp105)
Length = 413
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 44/96 (45%), Gaps = 13/96 (13%)
Query: 395 ARLAVHDVHVDKVFVPAGTTAMVNMWAITHDPTIWKNPWTFKPERFIEEDVPILGSDLRL 454
+RLA DV + V + AG +V+M + DP ++K+P ER G+ L
Sbjct: 297 SRLATEDVEIGGVSIKAGEGVIVSMLSANWDPAVFKDPAVLDVER---------GARHHL 347
Query: 455 APFGSGRRVCPGKALGLATVHLWLARLLHRFRWLPA 490
A FG G C G+ L + + L FR +P+
Sbjct: 348 A-FGFGPHQCLGQNLARMELQIVFDTL---FRRIPS 379
>pdb|2JJN|A Chain A, Structure Of Closed Cytochrome P450 Eryk
pdb|2JJO|A Chain A, Structure Of Cytochrome P450 Eryk In Complex With Its
Natural Substrate Erd
pdb|2JJP|A Chain A, Structure Of Cytochrome P450 Eryk In Complex With
Inhibitor Ketoconazole (Kc)
pdb|2XFH|A Chain A, Structure Of Cytochrome P450 Eryk Cocrystallized With
Inhibitor Clotrimazole
Length = 411
Score = 38.1 bits (87), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 47/113 (41%), Gaps = 14/113 (12%)
Query: 375 LQAIVKEVLRMHPPGPLLSWARLAVHDVHVDKVFVPAGTTAMVNMWAIT--HDPTIWKNP 432
+ AIV+EVLR PP P + R V V +PA MVN W ++ D +P
Sbjct: 274 IPAIVEEVLRYRPPFPQMQ--RTTTKATEVAGVPIPADV--MVNTWVLSANRDSDAHDDP 329
Query: 433 WTFKPERFIEEDVPILGSDLRLAPFGSGRRVCPGKALGLATVHLWLARLLHRF 485
F P R G +L+ FG G C G L + L ++ RF
Sbjct: 330 DRFDPSRKS-------GGAAQLS-FGHGVHFCLGAPLARLENRVALEEIIARF 374
>pdb|2VRV|A Chain A, Structure Of Histidine Tagged Cytochrome P450 Eryk In
Complex With Inhibitor Clotrimazole (Clt)
pdb|2WIO|A Chain A, Structure Of The Histidine Tagged, Open Cytochrome P450
Eryk From S. Erythraea
Length = 431
Score = 37.7 bits (86), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 47/113 (41%), Gaps = 14/113 (12%)
Query: 375 LQAIVKEVLRMHPPGPLLSWARLAVHDVHVDKVFVPAGTTAMVNMWAIT--HDPTIWKNP 432
+ AIV+EVLR PP P + R V V +PA MVN W ++ D +P
Sbjct: 294 IPAIVEEVLRYRPPFPQMQ--RTTTKATEVAGVPIPADV--MVNTWVLSANRDSDAHDDP 349
Query: 433 WTFKPERFIEEDVPILGSDLRLAPFGSGRRVCPGKALGLATVHLWLARLLHRF 485
F P R G +L+ FG G C G L + L ++ RF
Sbjct: 350 DRFDPSRKS-------GGAAQLS-FGHGVHFCLGAPLARLENRVALEEIIARF 394
>pdb|3ABA|A Chain A, Crystal Structure Of Cyp105p1 In Complex With Filipin I
Length = 403
Score = 37.7 bits (86), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 75/337 (22%), Positives = 123/337 (36%), Gaps = 71/337 (21%)
Query: 166 FSPRRISGLEILRQRLADEMLSKVNQQMENKGVVRVREVLQKGSLGNILESLFGGSVISL 225
F+ RR+ L QR+ DE L + + G V + + ++ LFG V
Sbjct: 106 FTVRRMQALRPNIQRIVDEHLDAIEAR---GGPVDLVKTFANAVPSMVISDLFGVPV--- 159
Query: 226 KKEELEAMVKEGYELIAQFNWEDYFPLNLLDFYGVKRRCHKLAARVKTLIGQVVEERKKN 285
E A ++ E + + + + R+ L+ Q+V+ER+ N
Sbjct: 160 ---ERRAEFQDIAEAMMRVDQD-------------AAATEAAGMRLGGLLYQLVQERRAN 203
Query: 286 SGEFNNGGNDFLSALLSLPKEDQ-LSDADTVAILWEMVFRGTDTVAILLEWIMARIVLHQ 344
G+D +SAL++ D + D + ++ DT A ++ A ++L
Sbjct: 204 P------GDDLISALITTEDPDGVVDDMFLMNAAGTLLIAAHDTTACMIGLGTA-LLLDS 256
Query: 345 DIQTKVQNEIDTWVGRDRHVEDSDISSLPYLQAIVKEVLRMHPPGPLLSWARLAVHDVHV 404
Q + E + VG V+E+LR G R+A DV +
Sbjct: 257 PDQLALLREDPSLVGN-----------------AVEELLRYLTIG-QFGGERVATRDVEL 298
Query: 405 DKVFVPAGTTAMVNMWAITHDPTIWKNPWTFKPERFIEEDVPILGSDLRLAP---FGSGR 461
V + G + ++ A DP + P F R R AP FG G
Sbjct: 299 GGVRIAKGEQVVAHVLAADFDPAFVEEPERFDITR-------------RPAPHLAFGFGA 345
Query: 462 RVCPGKALGLATVHLWLARLLHRFRWLP----AEPVD 494
C G+ L + + L FR LP A+PV+
Sbjct: 346 HQCIGQQLARIELQIVFETL---FRRLPGLRLAKPVE 379
>pdb|3E5L|A Chain A, Crystal Structure Of Cyp105p1 H72a Mutant
Length = 403
Score = 37.7 bits (86), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 75/337 (22%), Positives = 123/337 (36%), Gaps = 71/337 (21%)
Query: 166 FSPRRISGLEILRQRLADEMLSKVNQQMENKGVVRVREVLQKGSLGNILESLFGGSVISL 225
F+ RR+ L QR+ DE L + + G V + + ++ LFG V
Sbjct: 106 FTVRRMQALRPNIQRIVDEHLDAIEAR---GGPVDLVKTFANAVPSMVISDLFGVPV--- 159
Query: 226 KKEELEAMVKEGYELIAQFNWEDYFPLNLLDFYGVKRRCHKLAARVKTLIGQVVEERKKN 285
E A ++ E + + + + R+ L+ Q+V+ER+ N
Sbjct: 160 ---ERRAEFQDIAEAMMRVDQD-------------AAATEAAGMRLGGLLYQLVQERRAN 203
Query: 286 SGEFNNGGNDFLSALLSLPKEDQ-LSDADTVAILWEMVFRGTDTVAILLEWIMARIVLHQ 344
G+D +SAL++ D + D + ++ DT A ++ A ++L
Sbjct: 204 P------GDDLISALITTEDPDGVVDDMFLMNAAGTLLIAAHDTTACMIGLGTA-LLLDS 256
Query: 345 DIQTKVQNEIDTWVGRDRHVEDSDISSLPYLQAIVKEVLRMHPPGPLLSWARLAVHDVHV 404
Q + E + VG V+E+LR G R+A DV +
Sbjct: 257 PDQLALLREDPSLVGN-----------------AVEELLRYLTIGQ-FGGERVATRDVEL 298
Query: 405 DKVFVPAGTTAMVNMWAITHDPTIWKNPWTFKPERFIEEDVPILGSDLRLAP---FGSGR 461
V + G + ++ A DP + P F R R AP FG G
Sbjct: 299 GGVRIAKGEQVVAHVLAADFDPAFVEEPERFDITR-------------RPAPHLAFGFGA 345
Query: 462 RVCPGKALGLATVHLWLARLLHRFRWLP----AEPVD 494
C G+ L + + L FR LP A+PV+
Sbjct: 346 HQCIGQQLARIELQIVFETL---FRRLPGLRLAKPVE 379
>pdb|3E5J|A Chain A, Crystal Structure Of Cyp105p1 Wild-type Ligand-free Form
pdb|3E5K|A Chain A, Crystal Structure Of Cyp105p1 Wild-Type 4-Phenylimidazole
Complex
Length = 403
Score = 37.7 bits (86), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 78/342 (22%), Positives = 125/342 (36%), Gaps = 81/342 (23%)
Query: 166 FSPRRISGLEILRQRLADEMLSKVNQQMENKGVVRVREVLQKGSLGNILESLFGGSVISL 225
F+ RR+ L QR+ DE L + + G V + + ++ LFG V
Sbjct: 106 FTVRRMQALRPNIQRIVDEHLDAIEAR---GGPVDLVKTFANAVPSMVISDLFGVPV--- 159
Query: 226 KKEELEAMVKEGYELIAQFNWEDYFPLNLLDFYGVKRRCHKLAARVKTLIGQVVEERKKN 285
E A ++ E + + + + R+ L+ Q+V+ER+ N
Sbjct: 160 ---ERRAEFQDIAEAMMRVDQD-------------AAATEAAGMRLGGLLYQLVQERRAN 203
Query: 286 SGEFNNGGNDFLSALLSLPKEDQLSDADTVAILWEMVFRGT------DTVAILLEWIMAR 339
G+D +SAL++ D + D ++ M GT DT A ++ A
Sbjct: 204 P------GDDLISALITTEDPDGVVDD-----MFLMNAAGTLLIAAHDTTACMIGLGTA- 251
Query: 340 IVLHQDIQTKVQNEIDTWVGRDRHVEDSDISSLPYLQAIVKEVLRMHPPGPLLSWARLAV 399
++L Q + E + VG V+E+LR G R+A
Sbjct: 252 LLLDSPDQLALLREDPSLVGN-----------------AVEELLRYLTIG-QFGGERVAT 293
Query: 400 HDVHVDKVFVPAGTTAMVNMWAITHDPTIWKNPWTFKPERFIEEDVPILGSDLRLAP--- 456
DV + V + G + ++ A DP + P F R R AP
Sbjct: 294 RDVELGGVRIAKGEQVVAHVLAADFDPAFVEEPERFDITR-------------RPAPHLA 340
Query: 457 FGSGRRVCPGKALGLATVHLWLARLLHRFRWLP----AEPVD 494
FG G C G+ L + + L FR LP A+PV+
Sbjct: 341 FGFGAHQCIGQQLARIELQIVFETL---FRRLPGLRLAKPVE 379
>pdb|3TZO|A Chain A, The Role Of I87 Of Cyp158a2 In Oxidative Coupling Reaction
pdb|3TZO|B Chain B, The Role Of I87 Of Cyp158a2 In Oxidative Coupling Reaction
Length = 410
Score = 37.4 bits (85), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 43/106 (40%), Gaps = 10/106 (9%)
Query: 379 VKEVLRMHPPGPLLSWARLAVHDVHVDKVFVPAGTTAMVNMWAITHDPTIWKNPWTFKPE 438
+ E+LR P + +R+A+ DV + V + AG V+ A DP ++ +P E
Sbjct: 278 IDELLRWIPHRNAVGLSRIALEDVEIKGVRIRAGDAVYVSYLAANRDPEVFPDPDRIDFE 337
Query: 439 RFIEEDVPILGSDLRLAPFGSGRRVCPGKALGLATVHLWLARLLHR 484
R V FG G CPG L L + +L R
Sbjct: 338 RSPNPHV----------SFGFGPHYCPGGMLARLESELLVDAVLDR 373
>pdb|2D09|A Chain A, A Role For Active Site Water Molecules And Hydroxyl Groups
Of Substrate For Oxygen Activation In Cytochrome P450
158a2
Length = 407
Score = 37.4 bits (85), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 43/106 (40%), Gaps = 10/106 (9%)
Query: 379 VKEVLRMHPPGPLLSWARLAVHDVHVDKVFVPAGTTAMVNMWAITHDPTIWKNPWTFKPE 438
+ E+LR P + +R+A+ DV + V + AG V+ A DP ++ +P E
Sbjct: 278 IDELLRWIPHRNAVGLSRIALEDVEIKGVRIRAGDAVYVSYLAANRDPEVFPDPDRIDFE 337
Query: 439 RFIEEDVPILGSDLRLAPFGSGRRVCPGKALGLATVHLWLARLLHR 484
R V FG G CPG L L + +L R
Sbjct: 338 RSPNPHV----------SFGFGPHYCPGGMLARLESELLVDAVLDR 373
>pdb|1T93|A Chain A, Evidence For Multiple Substrate Recognition And Molecular
Mechanism Of C-C Reaction By Cytochrome P450 Cyp158a2
From Streptomyces Coelicolor A3(2)
Length = 406
Score = 37.4 bits (85), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 43/106 (40%), Gaps = 10/106 (9%)
Query: 379 VKEVLRMHPPGPLLSWARLAVHDVHVDKVFVPAGTTAMVNMWAITHDPTIWKNPWTFKPE 438
+ E+LR P + +R+A+ DV + V + AG V+ A DP ++ +P E
Sbjct: 278 IDELLRWIPHRNAVGLSRIALEDVEIKGVRIRAGDAVYVSYLAANRDPEVFPDPDRIDFE 337
Query: 439 RFIEEDVPILGSDLRLAPFGSGRRVCPGKALGLATVHLWLARLLHR 484
R V FG G CPG L L + +L R
Sbjct: 338 RSPNPHV----------SFGFGPHYCPGGMLARLESELLVDAVLDR 373
>pdb|3TNK|A Chain A, Crystal Structure Of Mutant I87r In Cyp158a2
pdb|3TNK|B Chain B, Crystal Structure Of Mutant I87r In Cyp158a2
Length = 407
Score = 37.4 bits (85), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 43/106 (40%), Gaps = 10/106 (9%)
Query: 379 VKEVLRMHPPGPLLSWARLAVHDVHVDKVFVPAGTTAMVNMWAITHDPTIWKNPWTFKPE 438
+ E+LR P + +R+A+ DV + V + AG V+ A DP ++ +P E
Sbjct: 278 IDELLRWIPHRNAVGLSRIALEDVEIKGVRIRAGDAVYVSYLAANRDPEVFPDPDRIDFE 337
Query: 439 RFIEEDVPILGSDLRLAPFGSGRRVCPGKALGLATVHLWLARLLHR 484
R V FG G CPG L L + +L R
Sbjct: 338 RSPNPHV----------SFGFGPHYCPGGMLARLESELLVDAVLDR 373
>pdb|1SE6|A Chain A, Crystal Structure Of Streptomyces Coelicolor A3(2)
Cyp158a2 From Antibiotic Biosynthetic Pathways
pdb|1SE6|B Chain B, Crystal Structure Of Streptomyces Coelicolor A3(2)
Cyp158a2 From Antibiotic Biosynthetic Pathways
Length = 406
Score = 37.4 bits (85), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 43/106 (40%), Gaps = 10/106 (9%)
Query: 379 VKEVLRMHPPGPLLSWARLAVHDVHVDKVFVPAGTTAMVNMWAITHDPTIWKNPWTFKPE 438
+ E+LR P + +R+A+ DV + V + AG V+ A DP ++ +P E
Sbjct: 278 IDELLRWIPHRNAVGLSRIALEDVEIKGVRIRAGDAVYVSYLAANRDPEVFPDPDRIDFE 337
Query: 439 RFIEEDVPILGSDLRLAPFGSGRRVCPGKALGLATVHLWLARLLHR 484
R V FG G CPG L L + +L R
Sbjct: 338 RSPNPHV----------SFGFGPHYCPGGMLARLESELLVDAVLDR 373
>pdb|1S1F|A Chain A, Crystal Structure Of Streptomyces Coelicolor A3(2)
Cyp158a2 From Antibiotic Biosynthetic Pathways
Length = 406
Score = 37.4 bits (85), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 43/106 (40%), Gaps = 10/106 (9%)
Query: 379 VKEVLRMHPPGPLLSWARLAVHDVHVDKVFVPAGTTAMVNMWAITHDPTIWKNPWTFKPE 438
+ E+LR P + +R+A+ DV + V + AG V+ A DP ++ +P E
Sbjct: 278 IDELLRWIPHRNAVGLSRIALEDVEIKGVRIRAGDAVYVSYLAANRDPEVFPDPDRIDFE 337
Query: 439 RFIEEDVPILGSDLRLAPFGSGRRVCPGKALGLATVHLWLARLLHR 484
R V FG G CPG L L + +L R
Sbjct: 338 RSPNPHV----------SFGFGPHYCPGGMLARLESELLVDAVLDR 373
>pdb|2D0E|A Chain A, Substrate Assited In Oxygen Activation In Cytochrome P450
158a2
Length = 407
Score = 37.4 bits (85), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 43/106 (40%), Gaps = 10/106 (9%)
Query: 379 VKEVLRMHPPGPLLSWARLAVHDVHVDKVFVPAGTTAMVNMWAITHDPTIWKNPWTFKPE 438
+ E+LR P + +R+A+ DV + V + AG V+ A DP ++ +P E
Sbjct: 278 IDELLRWIPHRNAVGLSRIALEDVEIKGVRIRAGDAVYVSYLAANRDPEVFPDPDRIDFE 337
Query: 439 RFIEEDVPILGSDLRLAPFGSGRRVCPGKALGLATVHLWLARLLHR 484
R V FG G CPG L L + +L R
Sbjct: 338 RSPNPHV----------SFGFGPHYCPGGMLARLESELLVDAVLDR 373
>pdb|3TKT|A Chain A, Crystal Structure Of Cyp108d1 From Novosphingobium
Aromaticivorans Dsm12444
Length = 450
Score = 36.6 bits (83), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 44/114 (38%), Gaps = 12/114 (10%)
Query: 375 LQAIVKEVLRMHPPGPLLSWARLAVHDVHVDKVFVPAGTTAMVNMWAITHDPTIWKNPWT 434
L IV+E +R P+ + R A D + + AG M+N A HDP + P
Sbjct: 322 LPGIVEEAIRWT--TPVQHFMRTAATDTELCGQKIAAGDWLMLNYVAANHDPAQFPEPRK 379
Query: 435 FKPERFIEEDVPILGSDLRLAPFGSGRRVCPGKALGLATVHLWLARLLHRFRWL 488
F P R R FG+G C G L + + L LL R L
Sbjct: 380 FDPTRPAN----------RHLAFGAGSHQCLGLHLARLEMRVLLDVLLDRVDSL 423
>pdb|1PKF|A Chain A, Crystal Structure Of Epothilone D-Bound Cytochrome
P450epok
Length = 419
Score = 36.2 bits (82), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 47/213 (22%), Positives = 85/213 (39%), Gaps = 35/213 (16%)
Query: 274 LIGQVVEERKKNSGEFNNGGNDFLSALLSLPKE-DQLSDADTVAILWEMVFRGTDTVAIL 332
L+ V++ER++N E ND L+ LL + +LS + VA++ ++ GTDT L
Sbjct: 208 LLHGVLDERRRNPLE-----NDVLTMLLQAEADGSRLSTKELVALVGAIIAAGTDTTIYL 262
Query: 333 LEWIMARIVLHQDIQTKVQNEIDTWVGRDRHVEDSDISSLPYLQAIVKEVLRMHPPGPLL 392
+ + + ++ + V+ E G R+ D + + +LR +
Sbjct: 263 IAFAVLNLLRSPEALELVKAE----PGLMRNALDEVLR--------FENILR-------I 303
Query: 393 SWARLAVHDVHVDKVFVPAGTTAMVNMWAITHDPTIWKNPWTFKPERFIEEDVPILGSDL 452
R A D+ + G + + + D T++ P F R +
Sbjct: 304 GTVRFARQDLEYCGASIKKGEMVFLLIPSALRDGTVFSRPDVFDVRR---------DTSA 354
Query: 453 RLAPFGSGRRVCPGKALGLATVHLWLARLLHRF 485
LA +G G VCPG +L + + + RF
Sbjct: 355 SLA-YGRGPHVCPGVSLARLEAEIAVGTIFRRF 386
>pdb|1UE8|A Chain A, Crystal Structure Of Thermophilic Cytochrome P450 From
Sulfolobus Tokodaii
pdb|3B4X|A Chain A, Crystal Structure Analysis Of Sulfolobus Tokodaii Strain7
Cytochrom P450
Length = 367
Score = 36.2 bits (82), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 28/108 (25%), Positives = 44/108 (40%), Gaps = 12/108 (11%)
Query: 379 VKEVLRMHPPGPLLSWARLAVHDVHVDKVFVPAGTTAMVNMWAITHDPTIWKNPWTFKPE 438
V+E LR PP ++ R+ V + + G V + + D ++K+P +F P+
Sbjct: 244 VEEALRFSPP--VMRTIRVTKEKVKIRDQVIDEGELVRVWIASANRDEEVFKDPDSFIPD 301
Query: 439 RFIEEDVPILGSDLRLAPFGSGRRVCPGKALGLATVHLWLARLLHRFR 486
R P L FGSG +C G L + L +FR
Sbjct: 302 RTPN---PHLS-------FGSGIHLCLGAPLARLEARIALEEFAKKFR 339
>pdb|1Q5D|A Chain A, Epothilone B-Bound Cytochrome P450epok
pdb|1Q5E|A Chain A, Substrate-Free Cytochrome P450epok
Length = 419
Score = 35.8 bits (81), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 47/213 (22%), Positives = 84/213 (39%), Gaps = 35/213 (16%)
Query: 274 LIGQVVEERKKNSGEFNNGGNDFLSALLSLPKE-DQLSDADTVAILWEMVFRGTDTVAIL 332
L+ V++ER++N E ND L+ LL + +LS + VA++ ++ GTDT L
Sbjct: 208 LLHGVLDERRRNPLE-----NDVLTMLLQAEADGSRLSTKELVALVGAIIAAGTDTTIYL 262
Query: 333 LEWIMARIVLHQDIQTKVQNEIDTWVGRDRHVEDSDISSLPYLQAIVKEVLRMHPPGPLL 392
+ + + ++ + V+ E G R+ D + +LR +
Sbjct: 263 IAFAVLNLLRSPEALELVKAE----PGLMRNALDEVLR--------FDNILR-------I 303
Query: 393 SWARLAVHDVHVDKVFVPAGTTAMVNMWAITHDPTIWKNPWTFKPERFIEEDVPILGSDL 452
R A D+ + G + + + D T++ P F R +
Sbjct: 304 GTVRFARQDLEYCGASIKKGEMVFLLIPSALRDGTVFSRPDVFDVRR---------DTSA 354
Query: 453 RLAPFGSGRRVCPGKALGLATVHLWLARLLHRF 485
LA +G G VCPG +L + + + RF
Sbjct: 355 SLA-YGRGPHVCPGVSLARLEAEIAVGTIFRRF 386
>pdb|3MGX|A Chain A, Crystal Structure Of P450 Oxyd That Is Involved In The
Biosynthesis Of Vancomycin-Type Antibiotics
pdb|3MGX|B Chain B, Crystal Structure Of P450 Oxyd That Is Involved In The
Biosynthesis Of Vancomycin-Type Antibiotics
Length = 415
Score = 35.4 bits (80), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 41/95 (43%), Gaps = 12/95 (12%)
Query: 375 LQAIVKEVLRMHPPGPLLSWARLAVHDVHVDKVFVPAGTTAMVNMWAITHDPTIWKNPWT 434
+ +V+EVLR P + R+ DV ++ +P+GT + + A DP + +P T
Sbjct: 287 VDTVVEEVLRWTSPA--MHVLRVTTADVTINGRDLPSGTPVVAWLPAANRDPAEFDDPDT 344
Query: 435 FKPERFIEEDVPILGSDLRLAPFGSGRRVCPGKAL 469
F P R R FG G C G AL
Sbjct: 345 FLPGRKPN----------RHITFGHGMHHCLGSAL 369
>pdb|1CPT|A Chain A, Crystal Structure And Refinement Of Cytochrome P450-Terp
At 2.3 Angstroms Resolution
Length = 428
Score = 35.4 bits (80), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 57/250 (22%), Positives = 90/250 (36%), Gaps = 34/250 (13%)
Query: 247 EDYFPLNL---LDFYGVKRRCHKLAARVKTLIGQVVEERKKNSGEFNNGGNDFLSALLSL 303
ED PL L DF+GV + A + + + F + N F S
Sbjct: 174 EDDEPLMLKLTQDFFGVHEPDEQAVAAPRQSADEAARRFHETIATFYDYFNGFTVDRRSC 233
Query: 304 PKEDQLSDADTVAILWEMVFRGT--DTVAILLEWIMARIVLHQDIQTKVQNEIDTWVGRD 361
PK+D +S +L G D I ++ H + I +G
Sbjct: 234 PKDDVMS------LLANSKLDGNYIDDKYINAYYVAIATAGHDTTSSSSGGAI---IGLS 284
Query: 362 RHVED-----SDISSLPYLQAIVKEVLRMHPPGPLLSWARLAVHDVHVDKVFVPAGTTAM 416
R+ E SD + +P L V E +R P+ S+ R A+ D V + G M
Sbjct: 285 RNPEQLALAKSDPALIPRL---VDEAVRW--TAPVKSFMRTALADTEVRGQNIKRGDRIM 339
Query: 417 VNMWAITHDPTIWKNPWTFKPERFIEEDVPILGSDLRLAPFGSGRRVCPGKALGLATVHL 476
++ + D ++ NP F RF R FG G +C G+ L + +
Sbjct: 340 LSYPSANRDEEVFSNPDEFDITRFPN----------RHLGFGWGAHMCLGQHLAKLEMKI 389
Query: 477 WLARLLHRFR 486
+ LL + +
Sbjct: 390 FFEELLPKLK 399
>pdb|1UED|A Chain A, Crystal Structure Of Oxyc A Cytochrome P450 Implicated In
An Oxidative C-C Coupling Reaction During Vancomycin
Biosynthesis.
pdb|1UED|B Chain B, Crystal Structure Of Oxyc A Cytochrome P450 Implicated In
An Oxidative C-C Coupling Reaction During Vancomycin
Biosynthesis
Length = 406
Score = 34.3 bits (77), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 29/117 (24%), Positives = 45/117 (38%), Gaps = 19/117 (16%)
Query: 376 QAIVKEVLR----MHPPGPLLSWARLAVHDVHVDKVFVPAGTTAMVNMWAITHDPTIWKN 431
+ +V E++R + P P RLA+ DV +D + AG + ++ D + +
Sbjct: 279 ERVVNELVRYLSPVQAPNP-----RLAIKDVVIDGQLIKAGDYVLCSILMANRDEALTPD 333
Query: 432 PWTFKPERFIEEDVPILGSDLRLAPFGSGRRVCPGKALGLATVHLWLARLLHRFRWL 488
P R DV FG G C G AL + + + L RF L
Sbjct: 334 PDVLDANRAAVSDVG----------FGHGIHYCVGAALARSMLRMAYQTLWRRFPGL 380
>pdb|2NZ5|A Chain A, Structure And Function Studies Of Cytochrome P450 158a1
From Streptomyces Coelicolor A3(2)
pdb|2NZ5|B Chain B, Structure And Function Studies Of Cytochrome P450 158a1
From Streptomyces Coelicolor A3(2)
pdb|2NZA|A Chain A, Structure And Function Studies Of Cytochrome P450 158a1
From Streptomyces Coelicolor A3(2)
pdb|2NZA|B Chain B, Structure And Function Studies Of Cytochrome P450 158a1
From Streptomyces Coelicolor A3(2)
Length = 413
Score = 34.3 bits (77), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 42/103 (40%), Gaps = 14/103 (13%)
Query: 395 ARLAVHDVHVDKVFVPAGTTAMVNMWAITHDPTIWKNPWTFKPERFIEEDVPILGSDLRL 454
AR+A+ DV V + AG V+ A DP ++ +P +R + P L
Sbjct: 297 ARIALEDVEVHGTRIAAGEPVYVSYLAANRDPDVFPDPDRIDLDR---DPNPHLA----- 348
Query: 455 APFGSGRRVCPGKALGLATVHLWLARLLHRFRWL----PAEPV 493
+G+G C G L L + LL R L PAE V
Sbjct: 349 --YGNGHHFCTGAVLARMQTELLVDTLLERLPGLRLAVPAEQV 389
>pdb|3ABB|A Chain A, Crystal Structure Of Cyp105d6
Length = 408
Score = 33.9 bits (76), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 31/120 (25%), Positives = 48/120 (40%), Gaps = 12/120 (10%)
Query: 396 RLAVHDVHVDKVFVPAGTTAMVNMWAITHDPTIWKNPWTFKPERFIEEDVPILGSDLRLA 455
R+A D+ V + AG +V++ + D ++NP F R V
Sbjct: 295 RMAKEDIEVGGATIKAGDAVLVSITLMNRDAKAYENPDIFDARRNARHHV---------- 344
Query: 456 PFGSGRRVCPGKALGLATVHLWLARLLHRFRWLP-AEPVDLSETLKLSLEMKKPLTCRVV 514
FG G C G+ L A + + L L R L A P+D +K + + P+ VV
Sbjct: 345 GFGHGIHQCLGQNLARAELEIALGGLFARIPGLRLAVPLD-EVPIKAGHDAQGPIELPVV 403
>pdb|2DKK|A Chain A, Structure/function Studies Of Cytochrome P450 158a1 From
Streptomyces Coelicolor A3(2)
Length = 411
Score = 33.9 bits (76), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 42/103 (40%), Gaps = 14/103 (13%)
Query: 395 ARLAVHDVHVDKVFVPAGTTAMVNMWAITHDPTIWKNPWTFKPERFIEEDVPILGSDLRL 454
AR+A+ DV V + AG V+ A DP ++ +P +R + P L
Sbjct: 297 ARIALEDVEVHGTRIAAGEPVYVSYLAANRDPDVFPDPDRIDLDR---DPNPHLA----- 348
Query: 455 APFGSGRRVCPGKALGLATVHLWLARLLHRFRWL----PAEPV 493
+G+G C G L L + LL R L PAE V
Sbjct: 349 --YGNGHHFCTGAVLARMQTELLVDTLLERLPGLRLAVPAEQV 389
>pdb|3B98|A Chain A, Crystal Structure Of Zebrafish Prostacyclin Synthase
(Cytochrome P450 8a1)
pdb|3B98|B Chain B, Crystal Structure Of Zebrafish Prostacyclin Synthase
(Cytochrome P450 8a1)
pdb|3B99|A Chain A, Crystal Structure Of Zebrafish Prostacyclin Synthase
(Cytochrome P450 8a1) In Complex With Substrate Analog
U51605
pdb|3B99|B Chain B, Crystal Structure Of Zebrafish Prostacyclin Synthase
(Cytochrome P450 8a1) In Complex With Substrate Analog
U51605
Length = 475
Score = 33.5 bits (75), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 36/169 (21%), Positives = 67/169 (39%), Gaps = 28/169 (16%)
Query: 335 WIMARIVLHQDIQTKVQNEIDTWVGRDRHVEDSDISSLPYLQAIVKEVLRMHPPGPLLSW 394
W+M ++ H + V+ EI G+ +E+ ++ P +++ E LR L+
Sbjct: 275 WVMGYLLTHPEALRAVREEIQG--GKHLRLEERQKNT-PVFDSVLWETLR-------LTA 324
Query: 395 ARLAVHDVHVDKVFVPAGTT----------AMVNMWAITHDPTIWKNPWTFKPERFIEED 444
A L DV DK + + + DP I + P F+ +RF+ D
Sbjct: 325 AALITRDVTQDKKICLSNGQEYHLRRGDRLCVFPFISPQMDPQIHQQPEMFQFDRFLNAD 384
Query: 445 ----VPILGSDLRL----APFGSGRRVCPGKALGLATVHLWLARLLHRF 485
+ R+ P+G+ +CPG+ + + + +L RF
Sbjct: 385 RTEKKDFFKNGARVKYPSVPWGTEDNLCPGRHFAVHAIKELVFTILTRF 433
>pdb|2Z3T|A Chain A, Crystal Structure Of Substrate Free Cytochrome P450 Stap
(cyp245a1)
pdb|2Z3T|B Chain B, Crystal Structure Of Substrate Free Cytochrome P450 Stap
(cyp245a1)
pdb|2Z3T|C Chain C, Crystal Structure Of Substrate Free Cytochrome P450 Stap
(cyp245a1)
pdb|2Z3T|D Chain D, Crystal Structure Of Substrate Free Cytochrome P450 Stap
(cyp245a1)
pdb|2Z3U|A Chain A, Crystal Structure Of Chromopyrrolic Acid Bound Cytochrome
P450 Stap (Cyp245a1)
pdb|3A1L|A Chain A, Crystal Structure Of 11,11'-Dichlorochromopyrrolic Acid
Bound Cytochrome P450 Stap (Cyp245a1)
Length = 425
Score = 32.0 bits (71), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 27/106 (25%), Positives = 42/106 (39%), Gaps = 12/106 (11%)
Query: 377 AIVKEVLRMHPPGPLLSWARLAVHDVHVDKVFVPAGTTAMVNMWAITHDPTIWKNPWTFK 436
A V+E++R PP + + R A D+ + +P G+ + + + DP + +P
Sbjct: 289 AAVEELMRYDPP--VQAVTRWAYEDIRLGDHDIPRGSRVVALLGSANRDPARFPDPDVLD 346
Query: 437 PERFIEEDVPILGSDLRLAPFGSGRRVCPGKALGLATVHLWLARLL 482
R E V FG G C G L A + L LL
Sbjct: 347 VHRAAERQV----------GFGLGIHYCLGATLARAEAEIGLRALL 382
>pdb|3OFU|A Chain A, Crystal Structure Of Cytochrome P450 Cyp101c1
pdb|3OFU|B Chain B, Crystal Structure Of Cytochrome P450 Cyp101c1
pdb|3OFU|C Chain C, Crystal Structure Of Cytochrome P450 Cyp101c1
pdb|3OFU|D Chain D, Crystal Structure Of Cytochrome P450 Cyp101c1
pdb|3OFU|E Chain E, Crystal Structure Of Cytochrome P450 Cyp101c1
pdb|3OFU|F Chain F, Crystal Structure Of Cytochrome P450 Cyp101c1
pdb|3OFT|A Chain A, Crystal Structure Of Cytochrome P450 Cyp101c1
pdb|3OFT|B Chain B, Crystal Structure Of Cytochrome P450 Cyp101c1
pdb|3OFT|C Chain C, Crystal Structure Of Cytochrome P450 Cyp101c1
Length = 396
Score = 31.6 bits (70), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 42/189 (22%), Positives = 76/189 (40%), Gaps = 34/189 (17%)
Query: 293 GNDFLSALLSLPKEDQLSDADTVA-ILWEMVFRGTDTVAILLEWIMARIVLHQDIQTKVQ 351
G+D S +LS P + D + ++F G DTVA ++ + + H + Q ++
Sbjct: 202 GDDLFSRILSEPVGGRPWTVDEARRMCRNLLFGGLDTVAAMIGMVALHLARHPEDQRLLR 261
Query: 352 NEIDTWVGRDRHVEDSDISSLPYLQAIVKEVLRMHPPGPLLSWARLAVHDVHVDKVFVPA 411
D + A E++R + P ++ +R AV DV D V +
Sbjct: 262 ERPD------------------LIPAAADELMRRY---PTVAVSRNAVADVDADGVTIRK 300
Query: 412 GTTAMVNMWAITH--DPTIWKNPWTFKPERFIEEDVPILGSDLRLAPFGSGRRVCPGKAL 469
G +V + ++ H DP ++ P + +R + + +R G G C G L
Sbjct: 301 GD--LVYLPSVLHNLDPASFEAPEEVRFDRGL--------APIRHTTMGVGAHRCVGAGL 350
Query: 470 GLATVHLWL 478
V ++L
Sbjct: 351 ARMEVIVFL 359
>pdb|3BUJ|A Chain A, Crystal Structure Of Calo2
Length = 397
Score = 31.6 bits (70), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 42/178 (23%), Positives = 65/178 (36%), Gaps = 30/178 (16%)
Query: 292 GGNDFLSALLSLPKEDQLSDADTVAILWEMVFRGTDTVAILLEWIMARIVLHQDIQTKVQ 351
GG D L+ +L +S + V+ + +F G +TVA + + ++ H D ++
Sbjct: 201 GGEDLLALMLDAHDRGLMSRNEIVSTVVTFIFTGHETVASQVGNAVLSLLAHPDQLDLLR 260
Query: 352 NEIDTWVGRDRHVEDSDISSLPYLQAIVKEVLRMHPPGPLLSWARLAVHDVHVDKVFVPA 411
D L V+E LR P + S R DV + +
Sbjct: 261 RRPD------------------LLAQAVEECLRYDP--SVQSNTRQLDVDVELRGRRLRR 300
Query: 412 GTTAMVNMWAITHDPTIWKNPWTFKPERFIEEDVPILGSDLRLAPFGSGRRVCPGKAL 469
+V A DP + P F ER + VP + FG+G R C G L
Sbjct: 301 DDVVVVLAGAANRDPRRYDRPDDFDIER---DPVPSMS-------FGAGMRYCLGSYL 348
>pdb|2RCM|A Chain A, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase Variant (F137l) (At-Aos(F137l), Cytochrome P450
74a) At 1.73 A Resolution
pdb|2RCM|B Chain B, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase Variant (F137l) (At-Aos(F137l), Cytochrome P450
74a) At 1.73 A Resolution
pdb|3DSJ|A Chain A, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase Variant (F137l) (At-Aos(F137l), Cytochrome P450
74a, Cyp74a) Complexed With 13(S)-Hod At 1.60 A
Resolution
pdb|3DSJ|B Chain B, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase Variant (F137l) (At-Aos(F137l), Cytochrome P450
74a, Cyp74a) Complexed With 13(S)-Hod At 1.60 A
Resolution
pdb|3DSK|A Chain A, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase Variant (F137l) (At-Aos(F137l), Cytochrome P450
74a, Cyp74a) Complexed With 12r,13s-Vernolic Acid At
1.55 A Resolution
pdb|3DSK|B Chain B, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase Variant (F137l) (At-Aos(F137l), Cytochrome P450
74a, Cyp74a) Complexed With 12r,13s-Vernolic Acid At
1.55 A Resolution
Length = 495
Score = 31.2 bits (69), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 42/186 (22%), Positives = 71/186 (38%), Gaps = 18/186 (9%)
Query: 314 TVAILWEMVFRGTDTVAILLEWIMARI--VLHQDIQTKVQNEIDTWVGRDR-HVEDSDIS 370
T +L+ F + IL ++ RI HQ + ++ EI + + + + I
Sbjct: 284 THNLLFATCFNTWGGMKILFPNMVKRIGRAGHQ-VHNRLAEEIRSVIKSNGGELTMGAIE 342
Query: 371 SLPYLQAIVKEVLRMHPPGPLLSWARLA---VHDVHVDKVFVPAGTTAMVNMWAITHDPT 427
+ +++V E LR PP + R V + H V AG T DP
Sbjct: 343 KMELTKSVVYECLRFEPP-VTAQYGRAKKDLVIESHDAAFKVKAGEMLYGYQPLATRDPK 401
Query: 428 IWKNPWTFKPERFIEEDVPIL--------GSDLRLAPFGSGRRVCPGKALGLATVHLWLA 479
I+ F PERF+ E+ L G + G+ + C GK + L++
Sbjct: 402 IFDRADEFVPERFVGEEGEKLLRHVLWSNGPETETPTVGN--KQCAGKDFVVLVARLFVI 459
Query: 480 RLLHRF 485
+ R+
Sbjct: 460 EIFRRY 465
>pdb|2RCH|A Chain A, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase (Aos, Cytochrome P450 74a, Cyp74a) Complexed
With 13(S)-Hod At 1.85 A Resolution
pdb|2RCH|B Chain B, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase (Aos, Cytochrome P450 74a, Cyp74a) Complexed
With 13(S)-Hod At 1.85 A Resolution
pdb|2RCL|A Chain A, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase (Aos, Cytochrome P450 74a, Cyp74a) Complexed
With 12r,13s-Vernolic Acid At 2.4 A Resolution
pdb|2RCL|B Chain B, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase (Aos, Cytochrome P450 74a, Cyp74a) Complexed
With 12r,13s-Vernolic Acid At 2.4 A Resolution
pdb|3CLI|A Chain A, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase (Aos, Cytochrome P450 74a, Cyp74a) At 1.80 A
Resolution
pdb|3CLI|B Chain B, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase (Aos, Cytochrome P450 74a, Cyp74a) At 1.80 A
Resolution
pdb|3DSI|A Chain A, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase (Aos, Cytochrome P450 74a, Cyp74a) Complexed
With 13(S)-Hot At 1.60 A Resolution
pdb|3DSI|B Chain B, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase (Aos, Cytochrome P450 74a, Cyp74a) Complexed
With 13(S)-Hot At 1.60 A Resolution
Length = 495
Score = 31.2 bits (69), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 42/186 (22%), Positives = 71/186 (38%), Gaps = 18/186 (9%)
Query: 314 TVAILWEMVFRGTDTVAILLEWIMARI--VLHQDIQTKVQNEIDTWVGRDR-HVEDSDIS 370
T +L+ F + IL ++ RI HQ + ++ EI + + + + I
Sbjct: 284 THNLLFATCFNTWGGMKILFPNMVKRIGRAGHQ-VHNRLAEEIRSVIKSNGGELTMGAIE 342
Query: 371 SLPYLQAIVKEVLRMHPPGPLLSWARLA---VHDVHVDKVFVPAGTTAMVNMWAITHDPT 427
+ +++V E LR PP + R V + H V AG T DP
Sbjct: 343 KMELTKSVVYECLRFEPP-VTAQYGRAKKDLVIESHDAAFKVKAGEMLYGYQPLATRDPK 401
Query: 428 IWKNPWTFKPERFIEEDVPIL--------GSDLRLAPFGSGRRVCPGKALGLATVHLWLA 479
I+ F PERF+ E+ L G + G+ + C GK + L++
Sbjct: 402 IFDRADEFVPERFVGEEGEKLLRHVLWSNGPETETPTVGN--KQCAGKDFVVLVARLFVI 459
Query: 480 RLLHRF 485
+ R+
Sbjct: 460 EIFRRY 465
>pdb|2YOO|A Chain A, Cholest-4-en-3-one Bound Structure Of Cyp142 From
Mycobacterium Smegmatis
pdb|2YOO|B Chain B, Cholest-4-en-3-one Bound Structure Of Cyp142 From
Mycobacterium Smegmatis
pdb|2YOO|C Chain C, Cholest-4-en-3-one Bound Structure Of Cyp142 From
Mycobacterium Smegmatis
pdb|2YOO|D Chain D, Cholest-4-en-3-one Bound Structure Of Cyp142 From
Mycobacterium Smegmatis
pdb|3ZBY|A Chain A, Ligand-free Structure Of Cyp142 From Mycobacterium
Smegmatis
pdb|3ZBY|B Chain B, Ligand-free Structure Of Cyp142 From Mycobacterium
Smegmatis
pdb|3ZBY|C Chain C, Ligand-free Structure Of Cyp142 From Mycobacterium
Smegmatis
pdb|3ZBY|D Chain D, Ligand-free Structure Of Cyp142 From Mycobacterium
Smegmatis
pdb|3ZBY|E Chain E, Ligand-free Structure Of Cyp142 From Mycobacterium
Smegmatis
pdb|3ZBY|F Chain F, Ligand-free Structure Of Cyp142 From Mycobacterium
Smegmatis
Length = 407
Score = 31.2 bits (69), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 64/333 (19%), Positives = 120/333 (36%), Gaps = 60/333 (18%)
Query: 157 LRRIAANHMFSPRRISGLEILRQRLADEMLSKVNQQMENKGVVRVREVLQKGSLGNILES 216
LRR N F+ +R+ RL D ++ V ++ E V + L +G++L
Sbjct: 88 LRRKLVNAGFTRKRVMDKVDSIGRLCDTLIDAVCERGECDFVRDIAAPLPMAVIGDML-- 145
Query: 217 LFGGSVISLKKEELEAMVKEGYELIAQFNWEDYFPLNL---LDFYGVKRRCHKLAARVKT 273
V+ +++ L W D L +D +++ AA +
Sbjct: 146 ----GVLPTERDML-------------LKWSDDLVCGLSSHVDEAAIQKLMDTFAAYTEF 188
Query: 274 LIGQVVEERKKNSGEFNNGGNDFLSALLSLPKEDQ-LSDADTVAILWEMVFRGTDTVAIL 332
+ + R + + +D S L++ E Q +SD + V ++ G +T
Sbjct: 189 TKDVITKRRAEPT-------DDLFSVLVNSEVEGQRMSDDEIVFETLLILIGGDETTRHT 241
Query: 333 LEWIMARIVLHQDIQTKVQNEIDTWVGRDRHVEDSDISSLPYLQAIVKEVLRMHPPGPLL 392
L +++ H+D W D+ ++ + L ++E+LR P+
Sbjct: 242 LSGGTEQLLRHRD----------QW--------DALVADVDLLPGAIEEMLRWT--SPVK 281
Query: 393 SWARLAVHDVHVDKVFVPAGTTAMVNMWAITHDPTIWKNPWTFKPERFIEEDVPILGSDL 452
+ R D + AG M+ + D +++ +P F+ +R V
Sbjct: 282 NMCRTLTADTVFHGTELRAGEKIMLMFESANFDESVFGDPDNFRIDRNPNSHVA------ 335
Query: 453 RLAPFGSGRRVCPGKALGLATVHLWLARLLHRF 485
FG G C G L + L R+L R
Sbjct: 336 ----FGFGTHFCLGNQLARLELRLMTERVLRRL 364
>pdb|1ZBH|A Chain A, 3'-End Specific Recognition Of Histone Mrna Stem-Loop By
3'- Exonuclease
pdb|1ZBH|B Chain B, 3'-End Specific Recognition Of Histone Mrna Stem-Loop By
3'- Exonuclease
pdb|1ZBH|C Chain C, 3'-End Specific Recognition Of Histone Mrna Stem-Loop By
3'- Exonuclease
pdb|1ZBH|D Chain D, 3'-End Specific Recognition Of Histone Mrna Stem-Loop By
3'- Exonuclease
Length = 299
Score = 30.8 bits (68), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 20/83 (24%), Positives = 41/83 (49%), Gaps = 2/83 (2%)
Query: 145 IGFAPSGKYWRHLRRIAANHMFSPRRISGLEILRQRLADEMLSKVNQQMEN-KGVVRVR- 202
+ + P K W ++R+ N PR + L I+ ++L + + N +++ K + R+
Sbjct: 198 LKYPPFAKKWINIRKSYGNFYKVPRSQTKLTIMLEKLGMDYDGRPNCGLDDSKNIARIAV 257
Query: 203 EVLQKGSLGNILESLFGGSVISL 225
+LQ G I E + G ++S+
Sbjct: 258 RMLQDGCELRINEKMHAGQLMSV 280
>pdb|3TYW|A Chain A, Crystal Structure Of Cyp105n1 From Streptomyces Coelicolor
A3(2)
pdb|3TYW|B Chain B, Crystal Structure Of Cyp105n1 From Streptomyces Coelicolor
A3(2)
pdb|3TYW|C Chain C, Crystal Structure Of Cyp105n1 From Streptomyces Coelicolor
A3(2)
pdb|3TYW|D Chain D, Crystal Structure Of Cyp105n1 From Streptomyces Coelicolor
A3(2)
pdb|4FXB|A Chain A, Crystal Structure Of Cyp105n1 From Streptomyces
Coelicolor: A Cytochrome P450 Oxidase In The Coelibactin
Siderophore Biosynthetic Pathway
pdb|4FXB|B Chain B, Crystal Structure Of Cyp105n1 From Streptomyces
Coelicolor: A Cytochrome P450 Oxidase In The Coelibactin
Siderophore Biosynthetic Pathway
Length = 417
Score = 30.4 bits (67), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 32/119 (26%), Positives = 46/119 (38%), Gaps = 21/119 (17%)
Query: 375 LQAIVKEVLRMHPPGPLLSWA-----RLAVHDVHVDKVFVPAGTTAMVNMWAITHDPTIW 429
+ A V E+LR +LS A R+A D+ + VPA + + HDP +
Sbjct: 282 MPAAVDELLR------VLSVADSIPLRVAAEDIELSGRTVPADDGVIALLAGANHDPEQF 335
Query: 430 KNPWTFKPERFIEEDVPILGSDLRLAPFGSGRRVCPGKALGLATVHLWLARLLHRFRWL 488
+P E V +D FG G C G+ L + + L LL R L
Sbjct: 336 DDP----------ERVDFHRTDNHHVAFGYGVHQCVGQHLARLELEVALETLLRRVPTL 384
>pdb|3DAF|A Chain A, The Crystal Structure Of [fe]-Hydrogenase Holoenzyme (Hmd)
From Methanocaldococcus Jannaschii Cocrystallized With
Cyanide
pdb|3DAG|A Chain A, The Crystal Structure Of [fe]-Hydrogenase Holoenzyme (Hmd)
From Methanocaldococcus Jannaschii
Length = 358
Score = 30.4 bits (67), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 18/63 (28%), Positives = 34/63 (53%), Gaps = 5/63 (7%)
Query: 179 QRLADEMLSKVNQQMENKGVVRVREVLQKGSLGNILESLFGGSV-----ISLKKEELEAM 233
Q +ADE L++++ M+ KG+ + E L +L +S+ G + +LK E+ +
Sbjct: 283 QMMADEALTQIHNLMKEKGIANMEEALDPAALLGTADSMCFGPLAEILPTALKVLEVHKV 342
Query: 234 VKE 236
V+E
Sbjct: 343 VEE 345
>pdb|2B0J|A Chain A, The Crystal Structure Of The Apoenzyme Of The
Iron-Sulfur-Cluster-Free Hydrogenase (Hmd)
pdb|3F47|A Chain A, The Crystal Structure Of [fe]-Hydrogenase (Hmd) Holoenzyme
From Methanocaldococcus Jannaschii
Length = 358
Score = 30.4 bits (67), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 13/47 (27%), Positives = 26/47 (55%)
Query: 179 QRLADEMLSKVNQQMENKGVVRVREVLQKGSLGNILESLFGGSVISL 225
Q +ADE L++++ M+ KG+ + E L +L +S+ G + +
Sbjct: 283 QMMADEALTQIHNLMKEKGIANMEEALDPAALLGTADSMCFGPLAEI 329
>pdb|3F46|A Chain A, The Crystal Structure Of C176a Mutated [fe]-Hydrogenase
(Hmd) Holoenzyme From Methanocaldococcus Jannaschii
pdb|3H65|A Chain A, The Crystal Structure Of C176a Mutated [fe]-Hydrogenase
(Hmd) Holoenzyme In Complex With
Methylenetetrahydromethanopterin
Length = 358
Score = 30.4 bits (67), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 13/42 (30%), Positives = 24/42 (57%)
Query: 179 QRLADEMLSKVNQQMENKGVVRVREVLQKGSLGNILESLFGG 220
Q +ADE L++++ M+ KG+ + E L +L +S+ G
Sbjct: 283 QMMADEALTQIHNLMKEKGIANMEEALDPAALLGTADSMCFG 324
>pdb|1J93|A Chain A, Crystal Structure And Substrate Binding Modeling Of The
Uroporphyrinogen-Iii Decarboxylase From Nicotiana
Tabacum: Implications For The Catalytic Mechanism
Length = 353
Score = 30.4 bits (67), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 30/60 (50%), Gaps = 2/60 (3%)
Query: 337 MARIVLHQ-DIQTKVQNEIDTWVGRDRHVEDSDISSLPYLQAIVKEVLRMHPPGPLLSWA 395
MA+ + +Q D + D+W V D + SLPYL+ IV V HP PL+ +A
Sbjct: 195 MAKYIRYQADSGAQAVQIFDSWATELSPV-DFEEFSLPYLKQIVDSVKLTHPNLPLILYA 253
>pdb|3PZF|A Chain A, 1.75a Resolution Structure Of Serpin-2 From Anopheles
Gambiae
Length = 397
Score = 30.0 bits (66), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 24/88 (27%), Positives = 46/88 (52%), Gaps = 2/88 (2%)
Query: 327 DTVAILLEWIMARIVLHQDIQTKVQNEIDTWVGRDRHVEDSDISSLPYLQAIVKEVLRMH 386
+TV +L+ I + LHQ + +NE++ + + + + S+ + P Q ++E+ +
Sbjct: 255 NTVNQVLDRINS-ASLHQALWYMEENEVNVTLPKFK-FDFSEQLNEPLQQVGIREIFSQN 312
Query: 387 PPGPLLSWARLAVHDVHVDKVFVPAGTT 414
PLL+ R A +V V ++F AG T
Sbjct: 313 ASLPLLARGRGARDEVRVSRIFQKAGIT 340
>pdb|1MHS|A Chain A, Model Of Neurospora Crassa Proton Atpase
pdb|1MHS|B Chain B, Model Of Neurospora Crassa Proton Atpase
Length = 920
Score = 28.5 bits (62), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 23/47 (48%), Gaps = 3/47 (6%)
Query: 52 FAWRNYNEIS-AKLRGPVGWPIVGTLPCMGSLAH--RKLASMAASLG 95
FA R + + A+ RG W I+G +PCM H K A +LG
Sbjct: 505 FATRGFRSLGVARKRGEGSWEILGIMPCMDPPRHDTYKTVCEAKTLG 551
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.322 0.137 0.421
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 14,723,263
Number of Sequences: 62578
Number of extensions: 601090
Number of successful extensions: 1719
Number of sequences better than 100.0: 171
Number of HSP's better than 100.0 without gapping: 81
Number of HSP's successfully gapped in prelim test: 90
Number of HSP's that attempted gapping in prelim test: 1497
Number of HSP's gapped (non-prelim): 184
length of query: 519
length of database: 14,973,337
effective HSP length: 103
effective length of query: 416
effective length of database: 8,527,803
effective search space: 3547566048
effective search space used: 3547566048
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 54 (25.4 bits)