Citrus Sinensis ID: 010075
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
ID ![]() | Alignment graph ![]() | Length ![]() |
Definition ![]() |
RBH(Q2H) ![]() |
RBH(H2Q) ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 519 | 2.2.26 [Sep-21-2011] | |||||||
| Q9XGY7 | 493 | Alcohol-forming fatty acy | N/A | no | 0.822 | 0.866 | 0.515 | 1e-141 | |
| Q93ZB9 | 493 | Fatty acyl-CoA reductase | yes | no | 0.826 | 0.870 | 0.472 | 1e-131 | |
| Q9LXN3 | 493 | Probable fatty acyl-CoA r | no | no | 0.816 | 0.860 | 0.465 | 1e-125 | |
| Q39152 | 491 | Fatty acyl-CoA reductase | no | no | 0.813 | 0.859 | 0.469 | 1e-125 | |
| Q0WRB0 | 496 | Probable fatty acyl-CoA r | no | no | 0.820 | 0.858 | 0.462 | 1e-121 | |
| Q1PEI6 | 496 | Fatty acyl-CoA reductase | no | no | 0.816 | 0.854 | 0.442 | 1e-112 | |
| Q08891 | 616 | Fatty acyl-CoA reductase | no | no | 0.816 | 0.688 | 0.367 | 3e-81 | |
| B9TSP7 | 548 | Fatty acyl-CoA reductase | no | no | 0.815 | 0.771 | 0.335 | 6e-76 | |
| Q9FMQ9 | 409 | Putative fatty acyl-CoA r | no | no | 0.591 | 0.750 | 0.394 | 6e-73 | |
| Q96K12 | 515 | Fatty acyl-CoA reductase | yes | no | 0.753 | 0.759 | 0.285 | 4e-44 |
| >sp|Q9XGY7|FAR_SIMCH Alcohol-forming fatty acyl-CoA reductase OS=Simmondsia chinensis PE=1 SV=1 | Back alignment and function desciption |
|---|
Score = 502 bits (1292), Expect = e-141, Method: Compositional matrix adjust.
Identities = 250/485 (51%), Positives = 327/485 (67%), Gaps = 58/485 (11%)
Query: 2 ELGSVVEFLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNE 61
E+GS++EFL+NK ILV+G TG +AK+F+EK+LR QPNVKKLYL +RA D ++AALR QNE
Sbjct: 3 EMGSILEFLDNKAILVTGATGSLAKIFVEKVLRSQPNVKKLYLLLRATDDETAALRLQNE 62
Query: 62 VLAKDVFNVLKEKWGTRLNSFISEKITFVPGDISSEDLGLKDSNLKEELWNELDIMVNSA 121
V K++F VLK+ G SF+SEK+T VPGDI+ EDL LKD NLKEE+W E+D++VN A
Sbjct: 63 VFGKELFKVLKQNLGANFYSFVSEKVTVVPGDITGEDLCLKDVNLKEEMWREIDVVVNLA 122
Query: 122 AITKFDERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAYVAGERTGLILENP---- 177
A F ERYDV+ INT G ++++FAKKC KLK+FVHVSTAYV+GE+ GLILE P
Sbjct: 123 ATINFIERYDVSLLINTYGAKYVLDFAKKCNKLKIFVHVSTAYVSGEKNGLILEKPYYMG 182
Query: 178 --LDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTK 235
L+G GLD + E K+++ K+NEL+ GA +K I MK++G ERA+ GWPN YVFTK
Sbjct: 183 ESLNGRLGLDINVEKKLVEAKINELQAAGATEKSIKSTMKDMGIERARHWGWPNVYVFTK 242
Query: 236 TMGEMLMQQSKENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGE 295
+GEML+ Q K ++ L IIRPT+++ T+KEPFPGWVE ++TI+ + V +G LRC++
Sbjct: 243 ALGEMLLMQYKGDIPLTIIRPTIITSTFKEPFPGWVEGVRTIDNVPVYYGKGRLRCMLCG 302
Query: 296 TKVIMDVIPVDMVVNAMIVAMVAHAKQPS-DANIYHVGSSL------------------- 335
I+D+IP DMVVNA IVAMVAHA Q + YHVGSS
Sbjct: 303 PSTIIDLIPADMVVNATIVAMVAHANQRYVEPVTYHVGSSAANPMKLSALPEMAHRYFTK 362
Query: 336 -------RNPVTLG-------------------------LQVANTVFHNFFKGVYNDLRK 363
RNPV +G L++ANT+F +FKG Y DL++
Sbjct: 363 NPWINPDRNPVHVGRAMVFSSFSTFHLYLTLNFLLPLKVLEIANTIFCQWFKGKYMDLKR 422
Query: 364 KVKFVMRVVEIYKPYFYFNGIFDDTNTEKLRMTARGSRTETDLFYFDPDSIEWSDYFMNT 423
K + ++R+V+IYKPY +F GIFDD NTEKLR+ A+ S E D+FYFDP +I W DYF+ T
Sbjct: 423 KTRLLLRLVDIYKPYLFFQGIFDDMNTEKLRIAAKESIVEADMFYFDPRAINWEDYFLKT 482
Query: 424 HIPGV 428
H PGV
Sbjct: 483 HFPGV 487
|
NADPH-dependent alcohol-forming fatty acyl-coenzyme A reductase that catalyzes the reduction of fatty acyl-CoA to fatty alcohols. The recombinant enzyme accepts saturated and mono-unsaturated fatty acyl-CoAs of 16 to 22 carbons. Simmondsia chinensis (taxid: 3999) EC: 1EC: .EC: 2EC: .EC: 1EC: .EC: 8EC: 4 |
| >sp|Q93ZB9|FACR3_ARATH Fatty acyl-CoA reductase 3 OS=Arabidopsis thaliana GN=FAR3 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 469 bits (1207), Expect = e-131, Method: Compositional matrix adjust.
Identities = 230/487 (47%), Positives = 322/487 (66%), Gaps = 58/487 (11%)
Query: 1 MELGSVVEFLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQN 60
ME+ SV+++L+NK+ILV G GF+A +F+EKILRV PNVKKLYL +RA+ SA RF +
Sbjct: 5 MEVVSVLKYLDNKSILVVGAAGFLANIFVEKILRVAPNVKKLYLLLRASKGKSATQRFND 64
Query: 61 EVLAKDVFNVLKEKWGTRLNSFISEKITFVPGDISSEDLGLKDSNLKEELWNELDIMVNS 120
E+L KD+F VLKEK+G LN SEKIT V GDI EDLGL+D +L E+ +++D +VN
Sbjct: 65 EILKKDLFKVLKEKYGPNLNQLTSEKITIVDGDICLEDLGLQDFDLAHEMIHQVDAIVNL 124
Query: 121 AAITKFDERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAYVAGERTGLILENP--- 177
AA TKFDERYDVA GINTLG ++++NFAK+C K+K+ VHVSTAYV GE++GLI+E P
Sbjct: 125 AATTKFDERYDVALGINTLGALNVLNFAKRCAKVKILVHVSTAYVCGEKSGLIMETPYRM 184
Query: 178 ---LDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFT 234
L+G +GLD + E K++ +KL++L+ GA + IT MK+LG RAK++GWPNTYVFT
Sbjct: 185 GETLNGTTGLDINYEKKLVQEKLDQLRVIGAAPETITETMKDLGLRRAKMYGWPNTYVFT 244
Query: 235 KTMGEMLMQQSKENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVG 294
K MGEM++ +ENLSLV++RP++++ T+KEPFPGW E ++TI++L V +G L C +
Sbjct: 245 KAMGEMMVGTKRENLSLVLLRPSIITSTFKEPFPGWTEGIRTIDSLAVGYGKGKLTCFLC 304
Query: 295 ETKVIMDVIPVDMVVNAMIVAMVAHAKQPSDANIYHVGSSLRNP---------------- 338
+ + DV+P DMVVN+++V+M A A + + IYHVGSSLRNP
Sbjct: 305 DLDAVSDVMPADMVVNSILVSMAAQAGKQEEI-IYHVGSSLRNPMKNSKFPELAYRYFSI 363
Query: 339 ----------VTLG-------------------------LQVANTVFHNFFKGVYNDLRK 363
V +G L++ N + F+ + K
Sbjct: 364 KPWTNKEGKVVKVGAIEILSSMRSFHRYMTIRYLIALKGLELVNIILCKLFEKEFQYFNK 423
Query: 364 KVKFVMRVVEIYKPYFYFNGIFDDTNTEKLRMTARGSRTETDLFYFDPDSIEWSDYFMNT 423
K+ F+ R+V++Y+PY +F GIFDD+NTEKLR + E ++FYFDP ++W DYF+NT
Sbjct: 424 KINFIFRLVDLYQPYLFFYGIFDDSNTEKLRKMVSKTGVENEMFYFDPKVLDWDDYFLNT 483
Query: 424 HIPGVEK 430
H+ G+ K
Sbjct: 484 HVIGLLK 490
|
Catalyzes the reduction of fatty acyl-CoA to fatty alcohols. The preferred substrates are C24:0 and C26:0. May be unable to use saturated and monounsaturated C16 and C18 acyl-CoA as substrates. Involved in cuticular wax formation. Arabidopsis thaliana (taxid: 3702) EC: 1 EC: . EC: 2 EC: . EC: 1 EC: . EC: n EC: 2 |
| >sp|Q9LXN3|FACR4_ARATH Probable fatty acyl-CoA reductase 4 OS=Arabidopsis thaliana GN=FAR4 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 448 bits (1153), Expect = e-125, Method: Compositional matrix adjust.
Identities = 225/483 (46%), Positives = 314/483 (65%), Gaps = 59/483 (12%)
Query: 5 SVVEFLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLA 64
+ ++FL +KTILV+GV GF+AKVF+EKILR+QP VKKL+L +RAAD +SA RF +EVL
Sbjct: 4 NCIQFLHDKTILVTGVPGFLAKVFVEKILRIQPKVKKLFLLLRAADNESAMQRFHSEVLE 63
Query: 65 KDVFNVLKEKWGTR-LNSFISEKITFVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAI 123
KD+F VLK G L +FI+EK+ +PGDIS ++LG+K S+L + +WNE+DI+VN AA
Sbjct: 64 KDLFRVLKNALGDENLKAFITEKVVPIPGDISVDNLGVKGSDLLQHMWNEIDIIVNVAAT 123
Query: 124 TKFDERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAYVAGERTGLILE------NP 177
T FDERYDV +NT G ++++NFAKKCVK ++ +HVSTAYV GE++GL+ E
Sbjct: 124 TNFDERYDVGLSVNTFGPLNVLNFAKKCVKGQLLLHVSTAYVRGEKSGLLHEKTFHMGET 183
Query: 178 LDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTM 237
L+G L + EM+++ QKL EL+ + ++EI+ MK+LG RAKLHGWPNTYVFTK+M
Sbjct: 184 LNGHRKLVIETEMELMKQKLKELQKQNCSEEEISQSMKDLGMSRAKLHGWPNTYVFTKSM 243
Query: 238 GEMLMQQSKENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETK 297
GEML+ +ENL +VIIRPT+++ T+ EPFPGW+E L+TI+++ VA +G L+C + +
Sbjct: 244 GEMLLGNYRENLPIVIIRPTMITSTFSEPFPGWIEGLRTIDSVIVAYGKGRLKCFLADPN 303
Query: 298 VIMDVIPVDMVVNAMIVAMVAHAKQPSDANIYHVGSSLRNPVT----------------- 340
++D+IPVDMV NAM+ A HA + +YHVGSS +NP+T
Sbjct: 304 SVLDLIPVDMVANAMVTAAAIHAGKLGSQTVYHVGSSCKNPITFEQIHDLAASYFTKNPL 363
Query: 341 -------------------------------LGLQVANTVF--HNFFKG-VYNDLRKKVK 366
L LQ+ ++ + ++ G Y D+ +K+K
Sbjct: 364 VRRDGSSILVSKGTILSTMAQFSFYMTLRYKLPLQMLRLIYVIYPWWNGNKYKDIDRKIK 423
Query: 367 FVMRVVEIYKPYFYFNGIFDDTNTEKLRMTARGSRTET-DLFYFDPDSIEWSDYFMNTHI 425
MR+V++Y+PY F GIFDDTNTEKLR+ + E LF FDP SI+W DY HI
Sbjct: 424 LAMRLVDLYRPYVLFKGIFDDTNTEKLRLKRKEINKEMYGLFEFDPKSIDWEDYMTTIHI 483
Query: 426 PGV 428
PG+
Sbjct: 484 PGL 486
|
Catalyzes the reduction of fatty acyl-CoA to fatty alcohols. Arabidopsis thaliana (taxid: 3702) EC: 1 EC: . EC: 2 EC: . EC: 1 EC: . EC: n EC: 2 |
| >sp|Q39152|FACR1_ARATH Fatty acyl-CoA reductase 1 OS=Arabidopsis thaliana GN=FAR1 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 447 bits (1150), Expect = e-125, Method: Compositional matrix adjust.
Identities = 227/483 (46%), Positives = 307/483 (63%), Gaps = 61/483 (12%)
Query: 5 SVVEFLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLA 64
+ V+FL NKTIL++G GF+AKV +EKILR+QPNVKK+YL +RA D SA R ++EV+
Sbjct: 4 NCVQFLGNKTILITGAPGFLAKVLVEKILRLQPNVKKIYLLLRAPDEKSAMQRLRSEVME 63
Query: 65 KDVFNVLKEKWGT-RLNSFISEKITFVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAI 123
D+F VL+ G LN+ + EKI VPGDIS ++LGLKD++L + +W+E+DI++N AA
Sbjct: 64 IDLFKVLRNNLGEDNLNALMREKIVPVPGDISIDNLGLKDTDLIQRMWSEIDIIINIAAT 123
Query: 124 TKFDERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAYVAGERTGLILENP------ 177
T FDERYD+ GINT G ++++NFAKKCVK ++ +HVSTAY++GE+ GL+LE P
Sbjct: 124 TNFDERYDIGLGINTFGALNVLNFAKKCVKGQLLLHVSTAYISGEQPGLLLEKPFKMGET 183
Query: 178 LDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTM 237
L G LD + E ++ QKL EL+ +EI+ MK+ G RAKLHGWPNTYVFTK M
Sbjct: 184 LSGDRELDINIEHDLMKQKLKELQD--CSDEEISQTMKDFGMARAKLHGWPNTYVFTKAM 241
Query: 238 GEMLMQQSKENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETK 297
GEMLM + +ENL LVIIRPT+++ T EPFPGW+E LKT++++ VA +G L+C + ++
Sbjct: 242 GEMLMGKYRENLPLVIIRPTMITSTIAEPFPGWIEGLKTLDSVIVAYGKGRLKCFLADSN 301
Query: 298 VIMDVIPVDMVVNAMIVAMVAHAKQPSDANIYHVGSSLRNPVTLG--------------- 342
+ D+IP DMVVNAM+ A AH+ IYHVGSS +NPVT G
Sbjct: 302 SVFDLIPADMVVNAMVAAATAHSGDTGIQAIYHVGSSCKNPVTFGQLHDFTARYFAKRPL 361
Query: 343 ------------------------------------LQVANTVFHNFFKGVYNDLRKKVK 366
L++ N V+ Y+DL +K+K
Sbjct: 362 IGRNGSPIIVVKGTILSTMAQFSLYMTLRYKLPLQILRLINIVYPWSHGDNYSDLSRKIK 421
Query: 367 FVMRVVEIYKPYFYFNGIFDDTNTEKLRMTARGSRTETD-LFYFDPDSIEWSDYFMNTHI 425
MR+VE+Y+PY F GIFDD NTE+LRM + + E D F FDP SI+W +Y NTHI
Sbjct: 422 LAMRLVELYQPYLLFKGIFDDLNTERLRMKRKENIKELDGSFEFDPKSIDWDNYITNTHI 481
Query: 426 PGV 428
PG+
Sbjct: 482 PGL 484
|
Catalyzes the reduction of fatty acyl-CoA to fatty alcohols. Arabidopsis thaliana (taxid: 3702) EC: 1 EC: . EC: 2 EC: . EC: 1 EC: . EC: n EC: 2 |
| >sp|Q0WRB0|FACR5_ARATH Probable fatty acyl-CoA reductase 5 OS=Arabidopsis thaliana GN=FAR5 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 434 bits (1117), Expect = e-121, Method: Compositional matrix adjust.
Identities = 227/491 (46%), Positives = 306/491 (62%), Gaps = 65/491 (13%)
Query: 1 MELGSVVEFLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQN 60
MEL + V+FL NKTILV+G TGF+AKVF+EKILRVQPNVKKLYL VRA+D ++A R +
Sbjct: 1 MEL-NCVQFLRNKTILVTGATGFLAKVFVEKILRVQPNVKKLYLLVRASDNEAATKRLRT 59
Query: 61 EVLAKDVFNVLKEKWG-TRLNSFISEKITFVPGDISSEDLGLKDSNLKEELWNELDIMVN 119
EV K++F VL++ G +LN+ + EK+ VPGDI+++ LG+ DS+L+E + E+DI+VN
Sbjct: 60 EVFEKELFKVLRQNLGDEKLNTLLYEKVVSVPGDIATDQLGINDSHLRERMQKEIDIVVN 119
Query: 120 SAAITKFDERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAYVAGERTGLILENPL- 178
AA T FDERYDV GINT G ++++NFAKKCVK+++ +HVSTAYV GE+ GLI E P
Sbjct: 120 VAATTNFDERYDVGLGINTFGALNVLNFAKKCVKVQLLLHVSTAYVCGEKPGLIPEKPFI 179
Query: 179 ------DGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYV 232
+ LD + E +++ Q+L EL + +++ITL MK LG ERAKLHGWPNTYV
Sbjct: 180 MEEIRNENGLQLDINLERELMKQRLKELNEQDCSEEDITLSMKELGMERAKLHGWPNTYV 239
Query: 233 FTKTMGEMLMQQSKENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCL 292
FTK+MGEML+ + KENL LVIIRPT+++ T EPFPGW+E L+T++++ +A +G L+C
Sbjct: 240 FTKSMGEMLLGKHKENLPLVIIRPTMITSTLSEPFPGWIEGLRTVDSVIIAYGKGVLKCF 299
Query: 293 VGETKVIMDVIPVDMVVNAMIVAMVAHAKQPSDANIYHVGSSLRNPVTLGLQVANTVFHN 352
+ + + D+IPVDMV NAMI A HA +YHVGSS +NPVT G ++
Sbjct: 300 LVDVNSVCDMIPVDMVANAMITAAAKHAGGSGVHMVYHVGSSHQNPVTFG-EIHEIAVRY 358
Query: 353 FFK-------------------------GVYNDLR------------------------- 362
F K +Y LR
Sbjct: 359 FTKNPLRSRNGSLITVSKVRFIPTMALFSLYMTLRYKLPLQLLKLVDIIYPWRNGDKYGD 418
Query: 363 --KKVKFVMRVVEIYKPYFYFNGIFDDTNTEKLRMTARGSR---TETDLFYFDPDSIEWS 417
+K++ VMR+VE+Y+PY F GIFDD NT+ L + TE +F FDP I W
Sbjct: 419 KNRKIELVMRLVELYEPYVLFKGIFDDRNTKSLCANQKEEEIKNTEKLMFDFDPKGINWG 478
Query: 418 DYFMNTHIPGV 428
DY N HI G+
Sbjct: 479 DYLTNIHISGL 489
|
Catalyzes the reduction of fatty acyl-CoA to fatty alcohols. Arabidopsis thaliana (taxid: 3702) EC: 1 EC: . EC: 2 EC: . EC: 1 EC: . EC: n EC: 2 |
| >sp|Q1PEI6|FACR8_ARATH Fatty acyl-CoA reductase 8 OS=Arabidopsis thaliana GN=FAR8 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 406 bits (1044), Expect = e-112, Method: Compositional matrix adjust.
Identities = 215/486 (44%), Positives = 298/486 (61%), Gaps = 62/486 (12%)
Query: 5 SVVEFLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLA 64
S V FL+NKTILV+G TGF+AKVF+EKILRVQPNV KLYL VRA+D ++A R + E
Sbjct: 4 SCVHFLQNKTILVTGATGFLAKVFVEKILRVQPNVNKLYLVVRASDNEAATKRLRTEAFE 63
Query: 65 KDVFNVLKEKWG-TRLNSFISEKITFVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAI 123
KD+F VL++ G +LN+ +SEK+ V GDI+ + LG+KDSNL+E + E+DI+VN AA
Sbjct: 64 KDLFKVLRDNLGDEKLNTLLSEKVVPVAGDIAMDHLGMKDSNLRERMQKEIDIVVNVAAT 123
Query: 124 TKFDERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAYVAGERTGLILENPL----- 178
T FDERYD+ GINT G ++++NFAKKCVK ++ +HVSTAYV GE+ GL+ E P
Sbjct: 124 TNFDERYDIGLGINTFGALNVLNFAKKCVKAQLLLHVSTAYVCGEKPGLLPEKPFVMEEI 183
Query: 179 --DGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKT 236
+ LD + E +++ Q+L EL +G ++ T +MK LG ERAKLHGWPNTYVFTK+
Sbjct: 184 CNENGLQLDINLERELMKQRLKELNEQGCSEEGTTFYMKELGMERAKLHGWPNTYVFTKS 243
Query: 237 MGEMLMQQSKENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGET 296
MGEML+ KENL LVIIRPT+++ T EPFPGW+E L+T++++ +A +G L+C + +
Sbjct: 244 MGEMLLGNHKENLPLVIIRPTMITSTLFEPFPGWIEGLRTVDSVIIAYGKGVLKCFLVDV 303
Query: 297 KVIMDVIPVDMVVNAMIVAMVAHAKQPSDANIYHVGSSLRNPVTLG-------------- 342
+ D+IP DMV NAMI A HA +Y VGSS +NP+ G
Sbjct: 304 NSVCDMIPADMVANAMIAAAATHAGGSKVHMVYQVGSSHQNPIIYGEIREILFCYFTKNS 363
Query: 343 -------------------------------------LQVANTVFHNFFKGVYNDLRKKV 365
L++ + ++ + Y + +K+
Sbjct: 364 LRSRNGSMITVSKMKLIPTLALFSLYMTIRYKLPVQLLKLVDIIYPSREGDEYKNKNRKI 423
Query: 366 KFVMRVVEIYKPYFYFNGIFDDTNTEKLRMTAR---GSRTETDLFYFDPDSIEWSDYFMN 422
VMR+V++Y+PY F GIFDD NT+ L + +E +F FDP I+W DY +N
Sbjct: 424 DMVMRLVKLYEPYVLFKGIFDDRNTKNLCAKQKEEDNRNSENFMFDFDPKIIKWKDYLIN 483
Query: 423 THIPGV 428
HIPG+
Sbjct: 484 VHIPGL 489
|
Catalyzes the reduction of fatty acyl-CoA to fatty alcohols. Arabidopsis thaliana (taxid: 3702) EC: 1 EC: . EC: 2 EC: . EC: 1 EC: . EC: n EC: 2 |
| >sp|Q08891|FACR2_ARATH Fatty acyl-CoA reductase 2 OS=Arabidopsis thaliana GN=FAR2 PE=2 SV=2 | Back alignment and function description |
|---|
Score = 302 bits (774), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 184/501 (36%), Positives = 282/501 (56%), Gaps = 77/501 (15%)
Query: 6 VVEFLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAK 65
++ FL+ K L++G TGF+AKV IEK+LR+ P+V K+YL ++A ++A R +NEVL
Sbjct: 124 IISFLQGKKFLITGSTGFLAKVLIEKVLRMAPDVSKIYLLIKAKSKEAAIERLKNEVLDA 183
Query: 66 DVFNVLKEKWGTRLNSFISEKITFVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITK 125
++FN LKE G SF+ K+ V G+I ++GL+ ++ EE+ E+D+++NSAA T
Sbjct: 184 ELFNTLKETHGASYMSFMLTKLIPVTGNICDSNIGLQ-ADSAEEIAKEVDVIINSAANTT 242
Query: 126 FDERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAYVAGERTGLILENP-------- 177
F+ERYDVA INT G +L+ FAKKC KLK+F+ VSTAYV G+R G I+E P
Sbjct: 243 FNERYDVALDINTRGPGNLMGFAKKCKKLKLFLQVSTAYVNGQRQGRIMEKPFSMGDCIA 302
Query: 178 ----LDG-ASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYV 232
L+G LD D EMK+ E KG ++ MK+LG ERA+ +GW +TYV
Sbjct: 303 TENFLEGNRKALDVDREMKLA----LEAARKGTQNQDEAQKMKDLGLERARSYGWQDTYV 358
Query: 233 FTKTMGEMLMQQSKENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCL 292
FTK MGEM++ ++ ++ +VIIRP+V+ TYK+PFPGW+E + ++ + + +G L
Sbjct: 359 FTKAMGEMMINSTRGDVPVVIIRPSVIESTYKDPFPGWMEGNRMMDPIVLCYGKGQLTGF 418
Query: 293 VGETKVIMDVIPVDMVVNAMIVAMVAHAKQPSDA----NIYHVGSSLRNPVTLG------ 342
+ + K ++DV+P DMVVNA + A+ H SD N+Y + SS NP+
Sbjct: 419 LVDPKGVLDVVPADMVVNATLAAIAKHGMAMSDPEPEINVYQIASSAINPLVFEDLAELL 478
Query: 343 ---------------------LQVANTVFHNFFKGVYND-----------------LRKK 364
+++ N+V +F ++ D + +K
Sbjct: 479 YNHYKTSPCMDSKGDPIMVRLMKLFNSV-DDFSDHLWRDAQERSGLMSGMSSVDSKMMQK 537
Query: 365 VKFVMR--------VVEIYKPYFYFNGIFDDTNTEKLRMTARGSRTETDLFYFDPDSIEW 416
+KF+ + + IY+PY ++ G FD++NT+ R+ S E F FD SI W
Sbjct: 538 LKFICKKSVEQAKHLATIYEPYTFYGGRFDNSNTQ--RLMENMSEDEKREFGFDVGSINW 595
Query: 417 SDYFMNTHIPGVEKLLQQKRS 437
+DY N HIPG+ + + + R+
Sbjct: 596 TDYITNVHIPGLRRHVLKGRA 616
|
Catalyzes the reduction of fatty acyl-CoA to fatty alcohols. Involved in the synthesis of the lipid component in sporopollenin. Arabidopsis thaliana (taxid: 3702) EC: 1 EC: . EC: 2 EC: . EC: 1 EC: . EC: n EC: 2 |
| >sp|B9TSP7|FACR6_ARATH Fatty acyl-CoA reductase 6, chloroplastic OS=Arabidopsis thaliana GN=FAR6 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 285 bits (729), Expect = 6e-76, Method: Compositional matrix adjust.
Identities = 160/477 (33%), Positives = 263/477 (55%), Gaps = 54/477 (11%)
Query: 6 VVEFLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAK 65
+V FLE K+ LV+G TGF+AKV IEK+LR + K++L +R+ D +SA R +E+++
Sbjct: 77 IVRFLEGKSYLVTGATGFLAKVLIEKLLRESLEIGKIFLLMRSKDQESANKRLYDEIISS 136
Query: 66 DVFNVLKEKWGTRLNSFISEKITFVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITK 125
D+F +LK+ G+ +F+ K+ V GDI ++LG+K S + + E+D++++ T
Sbjct: 137 DLFKLLKQMHGSSYEAFMKRKLIPVIGDIEEDNLGIK-SEIANMISEEIDVIISCGGRTT 195
Query: 126 FDERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAYVAGERTGLILENPL----DGA 181
FD+RYD A +N LG L++F K C KLK+F+H STAYV G+R G +LE PL +
Sbjct: 196 FDDRYDSALSVNALGPGRLLSFGKGCRKLKLFLHFSTAYVTGKREGTVLETPLCIGENIT 255
Query: 182 SGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEML 241
S L+ +E+K+ + + + + + +K +K LG ERA+ +GW N+Y FTK +GE +
Sbjct: 256 SDLNIKSELKLASEAVRKFRGREEIKK-----LKELGFERAQHYGWENSYTFTKAIGEAV 310
Query: 242 MQQSKENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMD 301
+ + NL +VIIRP+++ +Y EPFPGW++ + + + +A A+G + + + +MD
Sbjct: 311 IHSKRGNLPVVIIRPSIIESSYNEPFPGWIQGTRMADPIILAYAKGQISDFWADPQSLMD 370
Query: 302 VIPVDMVVNAMIVAMVAHAKQPSDANIYHVGSSLR-NPVTLG------------------ 342
+IPVDMV NA I AM H + +Y++ SS NP+ G
Sbjct: 371 IIPVDMVANAAIAAMAKHGCGVPEFKVYNLTSSSHVNPMRAGKLIDLSHQHLCDFPLEET 430
Query: 343 -LQVANTVFHNFFKGVYNDL----------------------RKKVKFVMRVVEIYKPYF 379
+ + + H+ +G + L ++K+ + + + + Y+PY
Sbjct: 431 VIDLEHMKIHSSLEGFTSALSNTIIKQERVIDNEGGGLSTKGKRKLNYFVSLAKTYEPYT 490
Query: 380 YFNGIFDDTNTEKLRMTARGSRTETDLFYFDPDSIEWSDYFMNTHIPGVEKLLQQKR 436
+F FD+TNT L S E F FD I+W Y +N H+PG++K K+
Sbjct: 491 FFQARFDNTNTTSL--IQEMSMEEKKTFGFDIKGIDWEHYIVNVHLPGLKKEFLSKK 545
|
Catalyzes the reduction of fatty acyl-CoA to fatty alcohols. May be involved in the generation of C30 primary alcohol. Arabidopsis thaliana (taxid: 3702) EC: 1 EC: . EC: 2 EC: . EC: 1 EC: . EC: n EC: 2 |
| >sp|Q9FMQ9|FACR7_ARATH Putative fatty acyl-CoA reductase 7 OS=Arabidopsis thaliana GN=FAR7 PE=3 SV=1 | Back alignment and function description |
|---|
Score = 275 bits (703), Expect = 6e-73, Method: Compositional matrix adjust.
Identities = 144/365 (39%), Positives = 203/365 (55%), Gaps = 58/365 (15%)
Query: 113 ELDIMVNSAAITKFDERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAYVAGERTGL 172
L ++V ++ ++RYDVA GINT G I+++NFAKKCVK K+ +HVST YV GER G
Sbjct: 40 RLYLLVRASDKKSAEQRYDVALGINTFGAINVLNFAKKCVKPKLLLHVSTVYVCGERPGH 99
Query: 173 ILEN------PLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHG 226
I+E L+G + +D + E ++ DQK + K +G ++E MK+ G +RA+L+G
Sbjct: 100 IVEKHFAMGESLNGKNKVDINTERRLADQKSKQFKEQGCSEEETEQAMKDFGLKRARLYG 159
Query: 227 WPNTYVFTKTMGEMLMQQSKENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQ 286
WPNTYVFTK MGEML+ +E + +VIIRPT+++ T+ +PFPGW+E LKT++++ + +
Sbjct: 160 WPNTYVFTKAMGEMLLGHYRETMPIVIIRPTIITSTFSDPFPGWIEGLKTVDSVIIFYGK 219
Query: 287 GNLRCLVGETKVIMDVIPVDMVVNAMIVAMVAHAKQPSDANIYHVGSSLRNPVTLGLQVA 346
G L+C + + K + D+IPVDMVVNAMI H +YHVGSS +NPV Q+
Sbjct: 220 GILKCFLVDQKTVCDIIPVDMVVNAMIAIAADHCHDSGSHTVYHVGSSNQNPVIYK-QIY 278
Query: 347 NTVFHNFFKG------------------------VYNDLR-------------------- 362
+ F K VY +LR
Sbjct: 279 EMMSRYFMKSPLVGRNGMLIVPKVTRISTLARFRVYTNLRYKLPIQILGLLSVISLSQRD 338
Query: 363 ------KKVKFVMRVVEIYKPYFYFNGIFDDTNTEKLRMTARGSRTETDLFYFDPDSIEW 416
+K K MR+V++YKPY F GIFDD N E LR+ E LF +P I+W
Sbjct: 339 KFALHNRKFKMAMRLVKLYKPYVLFKGIFDDKNMETLRIKNEAKDME-KLFGTNPKCIDW 397
Query: 417 SDYFM 421
DYFM
Sbjct: 398 EDYFM 402
|
Catalyzes the reduction of fatty acyl-CoA to fatty alcohols. Arabidopsis thaliana (taxid: 3702) EC: 1 EC: . EC: 2 EC: . EC: 1 EC: . EC: n EC: 2 |
| >sp|Q96K12|FACR2_HUMAN Fatty acyl-CoA reductase 2 OS=Homo sapiens GN=FAR2 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 179 bits (454), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 133/466 (28%), Positives = 217/466 (46%), Gaps = 75/466 (16%)
Query: 3 LGSVVEFLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEV 62
+ ++ F K+IL++G TGF+ KV +EK+ R P++K +Y+ VR +
Sbjct: 1 MSTIAAFYGGKSILITGATGFLGKVLMEKLFRTSPDLKVIYILVRPK---------AGQT 51
Query: 63 LAKDVFNVLKEKWGTRLNSF---ISEKITFVPGDISSEDLGLKDSNLKEELWNELDIMVN 119
L + VF +L K ++ + EKI + D++ D + ++ +EL + +I+ +
Sbjct: 52 LQQRVFQILDSKLFEKVKEVCPNVHEKIRAIYADLNQNDFAISKEDM-QELLSCTNIIFH 110
Query: 120 SAAITKFDERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAYVAGERTGL---ILEN 176
AA +FD+ A +N L+ A + KL+ F+H+STAY + I
Sbjct: 111 CAATVRFDDTLRHAVQLNVTATRQLLLMASQMPKLEAFIHISTAYSNCNLKHIDEVIYPC 170
Query: 177 PLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKT 236
P++ +D ++ +D + + EIT + + WPN Y +TK
Sbjct: 171 PVEPKKIID---SLEWLDDAIID---------EITPKL---------IRDWPNIYTYTKA 209
Query: 237 MGEMLMQQSKENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGET 296
+GEM++QQ NL++ IIRP++V T++EPFPGWV+++ N + +A+ +G LR +
Sbjct: 210 LGEMVVQQESRNLNIAIIRPSIVGATWQEPFPGWVDNINGPNGIIIATGKGFLRAIKATP 269
Query: 297 KVIMDVIPVDMVVNAMI-VAMVAHAKQPSDANIYHVGSSLRNPVT---LGLQV------- 345
+ DVIPVD VVN M+ V +P +YH+ S NP +G+QV
Sbjct: 270 MAVADVIPVDTVVNLMLAVGWYTAVHRPKSTLVYHITSGNMNPCNWHKMGVQVLATFEKI 329
Query: 346 ----------ANTVFHNFFKGVYNDLRKKVKFVMRVVEIYKPYFYFNGIFDDTNTEKLRM 395
AN ++F +N + + + IY Y G K RM
Sbjct: 330 PFERPFRRPNANFTSNSFTSQYWNAVSHRAPAI-----IYDCYLRLTG-------RKPRM 377
Query: 396 TA---RGSRTETDLFYFDPDSIEWSDYFMNTHIPGVEKLLQQKRSF 438
T R RT + L YF S EWS Y NT + E + +R F
Sbjct: 378 TKLMNRLLRTVSMLEYFINRSWEWSTY--NTEMLMSELSPEDQRVF 421
|
Catalyzes the reduction of fatty acyl-CoA to fatty alcohols. The preferred substrates are C16, C18, C18:1 and C18:2 but low activity can be observed with C10-C14 substrates. Homo sapiens (taxid: 9606) EC: 1 EC: . EC: 2 EC: . EC: 1 EC: . EC: n EC: 2 |
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 519 | ||||||
| 356550111 | 490 | PREDICTED: fatty acyl-CoA reductase 3-li | 0.826 | 0.875 | 0.552 | 1e-154 | |
| 356543580 | 490 | PREDICTED: fatty acyl-CoA reductase 3-li | 0.830 | 0.879 | 0.539 | 1e-153 | |
| 225436687 | 490 | PREDICTED: fatty acyl-CoA reductase 3 is | 0.826 | 0.875 | 0.540 | 1e-153 | |
| 356542728 | 493 | PREDICTED: fatty acyl-CoA reductase 3-li | 0.832 | 0.876 | 0.545 | 1e-153 | |
| 356541412 | 523 | PREDICTED: fatty acyl-CoA reductase 3-li | 0.828 | 0.822 | 0.541 | 1e-152 | |
| 388491432 | 492 | unknown [Medicago truncatula] | 0.824 | 0.869 | 0.537 | 1e-151 | |
| 357453013 | 492 | Fatty acyl-CoA reductase [Medicago trunc | 0.824 | 0.869 | 0.534 | 1e-151 | |
| 225436689 | 490 | PREDICTED: fatty acyl-CoA reductase 3 [V | 0.826 | 0.875 | 0.540 | 1e-149 | |
| 388500498 | 492 | unknown [Medicago truncatula] | 0.826 | 0.871 | 0.526 | 1e-149 | |
| 147852421 | 469 | hypothetical protein VITISV_041831 [Viti | 0.826 | 0.914 | 0.555 | 1e-148 |
| >gi|356550111|ref|XP_003543433.1| PREDICTED: fatty acyl-CoA reductase 3-like isoform 1 [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 551 bits (1421), Expect = e-154, Method: Compositional matrix adjust.
Identities = 269/487 (55%), Positives = 342/487 (70%), Gaps = 58/487 (11%)
Query: 1 MELGSVVEFLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQN 60
ME+GSV+ FLE+KTIL+ G TGF+AK+F+EKILRVQPNVKKL+L +RA+D SA R QN
Sbjct: 1 MEVGSVLNFLEDKTILIVGATGFLAKIFLEKILRVQPNVKKLFLLLRASDAKSANYRLQN 60
Query: 61 EVLAKDVFNVLKEKWGTRLNSFISEKITFVPGDISSEDLGLKDSNLKEELWNELDIMVNS 120
E++AKD+F VLKEK G SFISEK+T VPGDIS EDLGLKDS L+EE+ N+ D++VN
Sbjct: 61 EIIAKDLFIVLKEKLGANFKSFISEKVTLVPGDISYEDLGLKDSILREEICNQTDVIVNL 120
Query: 121 AAITKFDERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAYVAGERTGLILENP--- 177
AA T FDERYD+A G+N GV H++NFAK+C KLKV +HVSTAYV GER GLILE P
Sbjct: 121 AATTNFDERYDIALGLNIFGVKHVMNFAKQCTKLKVVLHVSTAYVCGERGGLILEEPYNF 180
Query: 178 ---LDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFT 234
L+G SGLD DAE ++ KL+EL+ +GA ++EI + MKNLG RAK++GWPNTYVFT
Sbjct: 181 GDSLNGVSGLDIDAERTIVCDKLDELREQGATEREIKIAMKNLGISRAKVYGWPNTYVFT 240
Query: 235 KTMGEMLMQQSKENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVG 294
K +GEML++Q K LS+VI+RPT+V+ T +EPFPGWVE ++TI++L V +G L C +G
Sbjct: 241 KAVGEMLVEQLKGRLSVVIMRPTIVTSTLREPFPGWVEGVRTIDSLAVTYGKGKLTCFLG 300
Query: 295 ETKVIMDVIPVDMVVNAMIVAMVAHAKQPSDANIYHVGSSLRNPVTL------------- 341
++D +P DMVVNAM+VAMVAHA QPSD IYHVGSSLRNP+T
Sbjct: 301 NINGVVDAVPADMVVNAMLVAMVAHANQPSDI-IYHVGSSLRNPLTYLNLQDYGLKYFTA 359
Query: 342 --------------------------------------GLQVANTVFHNFFKGVYNDLRK 363
GL++ANT +F+G Y +L +
Sbjct: 360 KPWINKDGTPVKVGRVTVLTDMDSFQRYMFIRYLLPLKGLELANTALCQYFRGTYLELHR 419
Query: 364 KVKFVMRVVEIYKPYFYFNGIFDDTNTEKLRMTARGSRTETDLFYFDPDSIEWSDYFMNT 423
K++ VMR+VE+Y+PY +FNG+FDD NTEKLR+ A+ S TETDLFYFD + W DYFM T
Sbjct: 420 KIQVVMRMVELYRPYMFFNGVFDDINTEKLRIAAKQSGTETDLFYFDTKEVNWEDYFMKT 479
Query: 424 HIPGVEK 430
H+PG+ K
Sbjct: 480 HLPGIVK 486
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356543580|ref|XP_003540238.1| PREDICTED: fatty acyl-CoA reductase 3-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 549 bits (1414), Expect = e-153, Method: Compositional matrix adjust.
Identities = 264/489 (53%), Positives = 346/489 (70%), Gaps = 58/489 (11%)
Query: 1 MELGSVVEFLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQN 60
ME+GSV+ FL+++TIL+ G TGF+AK+F+EKILRVQPNVKKL+L +RA+D SA R QN
Sbjct: 1 MEVGSVLNFLQDRTILIVGATGFLAKIFLEKILRVQPNVKKLFLLLRASDAKSANYRLQN 60
Query: 61 EVLAKDVFNVLKEKWGTRLNSFISEKITFVPGDISSEDLGLKDSNLKEELWNELDIMVNS 120
E++AKD+F VLKEK G SFISEK+T VPGDIS EDLGL DS L+EE+ N+ D++VN
Sbjct: 61 EIIAKDLFIVLKEKLGANFKSFISEKVTLVPGDISYEDLGLTDSILREEICNQTDVIVNL 120
Query: 121 AAITKFDERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAYVAGERTGLILENP--- 177
AA TKFDERYD+A G+N GV H++ FAK+C KLK+ +HVSTAYV GER GLILE+P
Sbjct: 121 AATTKFDERYDLALGLNIFGVKHVMKFAKQCAKLKILLHVSTAYVCGERGGLILEDPYHF 180
Query: 178 ---LDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFT 234
L+G SGLD +AE ++ KL+EL+ +GA ++EI + MKNLG RAK++GWPNTYVFT
Sbjct: 181 GDSLNGVSGLDIEAERTIVCDKLDELREQGATEREIEIAMKNLGISRAKVYGWPNTYVFT 240
Query: 235 KTMGEMLMQQSKENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVG 294
K +GEML++Q K +LS+VI+RPT+V+ T +EPFPGW E ++TI++L V +G L+C +G
Sbjct: 241 KAVGEMLVEQLKGSLSVVIMRPTIVTSTLREPFPGWAEGVRTIDSLAVTYGKGKLKCFLG 300
Query: 295 ETKVIMDVIPVDMVVNAMIVAMVAHAKQPSDANIYHVGSSLRNPVTL------------- 341
++DV+P DMVVNAM+VAMVAHAKQPSD +YHVGSSLRNP+T
Sbjct: 301 NINGVVDVVPADMVVNAMLVAMVAHAKQPSDI-VYHVGSSLRNPLTYLNLQDYGLKYFTA 359
Query: 342 --------------------------------------GLQVANTVFHNFFKGVYNDLRK 363
GL++ANT +F+G Y +L +
Sbjct: 360 KPWINKDGTPVKVGRVTVLTDMDSFQRYMFIRYLLPLKGLELANTALCQYFRGTYLELHR 419
Query: 364 KVKFVMRVVEIYKPYFYFNGIFDDTNTEKLRMTARGSRTETDLFYFDPDSIEWSDYFMNT 423
K++ VMR+VE+Y+PY +F+G+FDD NTEKLRM A+ S TETDLFYFD + W DYFM T
Sbjct: 420 KIQVVMRMVELYRPYMFFDGVFDDMNTEKLRMAAKQSGTETDLFYFDTKEVNWDDYFMKT 479
Query: 424 HIPGVEKLL 432
H+PG+ K +
Sbjct: 480 HLPGIVKYI 488
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|225436687|ref|XP_002263127.1| PREDICTED: fatty acyl-CoA reductase 3 isoform 1 [Vitis vinifera] gi|296084944|emb|CBI28353.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 548 bits (1411), Expect = e-153, Method: Compositional matrix adjust.
Identities = 263/487 (54%), Positives = 340/487 (69%), Gaps = 58/487 (11%)
Query: 1 MELGSVVEFLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQN 60
MELGS+VEFLENK+ILV+G TGF+AK+F+E+ILR QPNVKKL+L +RA D SA R N
Sbjct: 1 MELGSIVEFLENKSILVTGATGFLAKIFVERILRTQPNVKKLFLLLRAGDTKSATQRLHN 60
Query: 61 EVLAKDVFNVLKEKWGTRLNSFISEKITFVPGDISSEDLGLKDSNLKEELWNELDIMVNS 120
EV+ K++F VL+EKW + NSF+S+K+T VPGDIS +DLG+ DSNL+EE+W E+DI+VN
Sbjct: 61 EVIGKELFWVLREKWASDFNSFVSKKLTPVPGDISCDDLGVTDSNLREEMWREVDIVVNL 120
Query: 121 AAITKFDERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAYVAGERTGLILENP--- 177
AA T FDERYDVA GIN LG H+++FAKKCVK+K+ +HVSTAYVAGE++GLILE P
Sbjct: 121 AATTNFDERYDVALGINALGARHVLDFAKKCVKIKMLLHVSTAYVAGEQSGLILEQPFQM 180
Query: 178 ---LDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFT 234
L+G GLD + E K+++++L+EL+++GA ++ +TL MK+ G +RAK+HGWPNTYVFT
Sbjct: 181 GETLNGTFGLDIEEEKKLMEERLDELQSEGATREAVTLAMKDFGIQRAKMHGWPNTYVFT 240
Query: 235 KTMGEMLMQQSKENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVG 294
K MGEML+ KENL L I+RPT+VS TYKEPFPGWVE ++TI++ V +G L +G
Sbjct: 241 KAMGEMLLGHLKENLPLAILRPTIVSSTYKEPFPGWVEGIRTIDSFAVGYGKGRLTFFLG 300
Query: 295 ETKVIMDVIPVDMVVNAMIVAMVAHAKQPSDANIYHVGSSLRNPV------TLGL----- 343
+ + I+DVIP DMVVN+MIVAM AHA QP + IY VGSS++NPV GL
Sbjct: 301 DIEAIVDVIPADMVVNSMIVAMAAHANQPCEV-IYQVGSSVKNPVRYSNLQDFGLRYFTK 359
Query: 344 ----------------------------------------QVANTVFHNFFKGVYNDLRK 363
Q NT F +F+G Y DL +
Sbjct: 360 NPWINKDGKAVKVGKVTVLSTMDSFHRYMALRYLLLLKGLQFVNTAFCQYFRGTYTDLNR 419
Query: 364 KVKFVMRVVEIYKPYFYFNGIFDDTNTEKLRMTARGSRTETDLFYFDPDSIEWSDYFMNT 423
++KF++R++E+YKPY +F G+FDD NTEKLRM S E DLFYFDP I+W DYFMN
Sbjct: 420 RIKFLLRLIELYKPYLFFKGVFDDMNTEKLRMAVTASGAEADLFYFDPKCIDWEDYFMNI 479
Query: 424 HIPGVEK 430
HIPG K
Sbjct: 480 HIPGAVK 486
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356542728|ref|XP_003539817.1| PREDICTED: fatty acyl-CoA reductase 3-like isoform 1 [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 546 bits (1407), Expect = e-153, Method: Compositional matrix adjust.
Identities = 268/491 (54%), Positives = 341/491 (69%), Gaps = 59/491 (12%)
Query: 1 MELGSVVEFLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQN 60
MELGS++ FL++K IL++G TGF+AKV +EKILRVQPNVKKLYL +RAAD SA R N
Sbjct: 1 MELGSILHFLQDKNILITGATGFLAKVLLEKILRVQPNVKKLYLLLRAADAKSATHRLNN 60
Query: 61 EVLAKDVFNVLKEKWGTRLNSFISEKITFVPGDISSEDLGLKDSNLKEELWNELDIMVNS 120
E++ KD+F VLKEK G NSF+S+K+T VPGDIS EDLGL+DS L+EE++++ D+++N
Sbjct: 61 EIIGKDLFRVLKEKLGANFNSFVSKKLTLVPGDISREDLGLEDSILREEIYDQTDVIINL 120
Query: 121 AAITKFDERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAYVAGE--RTGLILENP- 177
AA T FDERYD++ G+NT GV +++NFAKKC KL+V VHVSTAYV GE R GLILE P
Sbjct: 121 AATTNFDERYDISLGLNTFGVKYVINFAKKCTKLEVLVHVSTAYVCGEGGREGLILEKPY 180
Query: 178 -----LDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYV 232
L+G SGLD +AE KV+ KL+EL+ GA +KEI MK+LG RAKL+GWPNTYV
Sbjct: 181 HLGDSLNGVSGLDINAEEKVVRDKLSELQQLGATEKEIKEVMKDLGISRAKLYGWPNTYV 240
Query: 233 FTKTMGEMLMQQSKENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCL 292
FTK MGEML++Q K NLS+V IRPT+V+ T+KEPFPGW E ++TI++L VA +G L C
Sbjct: 241 FTKAMGEMLVEQLKGNLSVVTIRPTIVTSTFKEPFPGWAEGVRTIDSLAVAYGKGKLTCF 300
Query: 293 VGETKVIMDVIPVDMVVNAMIVAMVAHAKQPSDANIYHVGSSLRNP-------------- 338
+G+ K I+D IP DMVVNA++VAMVAHA PSD IYHVGSS+R P
Sbjct: 301 LGDLKAIVDAIPADMVVNAILVAMVAHANHPSDDVIYHVGSSVRRPLRYGNLQEYGFRYF 360
Query: 339 -------------------------------------VTLGLQVANTVFHNFFKGVYNDL 361
V GL++ANT F +F+G Y +L
Sbjct: 361 TAKPCINKDGRPVKVGKVTVLSNMDSFRRYMFIRYLLVLKGLELANTAFCQYFQGTYLNL 420
Query: 362 RKKVKFVMRVVEIYKPYFYFNGIFDDTNTEKLRMTARGSRTETDLFYFDPDSIEWSDYFM 421
+K++ VMR+V++YKPY +F FDD NTEKLRM AR ETDLFYFDP+ I+W DYF+
Sbjct: 421 NRKIQIVMRLVDLYKPYLFFKAAFDDMNTEKLRMAARQGGVETDLFYFDPELIDWEDYFL 480
Query: 422 NTHIPGVEKLL 432
N H+PGV K +
Sbjct: 481 NIHLPGVVKYI 491
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356541412|ref|XP_003539171.1| PREDICTED: fatty acyl-CoA reductase 3-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 544 bits (1402), Expect = e-152, Method: Compositional matrix adjust.
Identities = 265/489 (54%), Positives = 339/489 (69%), Gaps = 59/489 (12%)
Query: 1 MELGSVVEFLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQN 60
MELGS++ FL++K+IL++G TGF+AKV +EKILRVQPNVKKLYL +R D SA R N
Sbjct: 31 MELGSILHFLQDKSILITGATGFLAKVLLEKILRVQPNVKKLYLLLRTEDAKSATHRLHN 90
Query: 61 EVLAKDVFNVLKEKWGTRLNSFISEKITFVPGDISSEDLGLKDSNLKEELWNELDIMVNS 120
E++ KD+F VLKEK G NSF+S+K+T VPGDIS EDLGL+DS L+EE++++ D+++N
Sbjct: 91 EIIGKDLFRVLKEKLGANFNSFVSKKLTLVPGDISREDLGLEDSILREEIYDQTDVIINL 150
Query: 121 AAITKFDERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAYVAGE--RTGLILENP- 177
AA T FDERYD++ G+NT GV +++NFAKKC KLKV VHVSTAYV GE R GLILE P
Sbjct: 151 AATTNFDERYDISLGLNTFGVKYVINFAKKCTKLKVLVHVSTAYVCGEGGREGLILEKPY 210
Query: 178 -----LDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYV 232
L+G SGLD +AE KV+ KL+EL+ GA +KEI MK+LG RAKL+GWPNTYV
Sbjct: 211 HLGDSLNGVSGLDINAEEKVVRDKLSELQQLGATEKEIKEVMKDLGISRAKLYGWPNTYV 270
Query: 233 FTKTMGEMLMQQSKENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCL 292
FTK MGEML++Q K NLS+VIIRP++V+ T KEPFPGW E ++TI++L VA +G L C
Sbjct: 271 FTKAMGEMLVEQLKGNLSVVIIRPSIVTSTLKEPFPGWAEGVRTIDSLAVAYGKGKLTCF 330
Query: 293 VGETKVIMDVIPVDMVVNAMIVAMVAHAKQPSDANIYHVGSSLRNP-------------- 338
+G+ K I+D IP DMVVNA++VAMVAHA +PSD IYH+GSS+R P
Sbjct: 331 LGDLKAIVDAIPADMVVNAILVAMVAHANRPSDDVIYHIGSSVRRPLRYGKLQEYGFRYF 390
Query: 339 -------------------------------------VTLGLQVANTVFHNFFKGVYNDL 361
V GL++ANT F +F+G Y DL
Sbjct: 391 TAKPCISKDGRPVKVGKVTVLSNMDSFRRYMFIRYLLVLKGLELANTAFCQYFQGTYLDL 450
Query: 362 RKKVKFVMRVVEIYKPYFYFNGIFDDTNTEKLRMTARGSRTETDLFYFDPDSIEWSDYFM 421
+K++ VMR+V++YKPY +F FDD NTEKLRM R ETDLFYFDP+ I+W DYF+
Sbjct: 451 NRKIQIVMRLVDLYKPYLFFKAAFDDMNTEKLRMAGRQGGVETDLFYFDPELIDWEDYFL 510
Query: 422 NTHIPGVEK 430
N H+PG+ K
Sbjct: 511 NIHLPGMVK 519
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|388491432|gb|AFK33782.1| unknown [Medicago truncatula] | Back alignment and taxonomy information |
|---|
Score = 541 bits (1395), Expect = e-151, Method: Compositional matrix adjust.
Identities = 261/486 (53%), Positives = 344/486 (70%), Gaps = 58/486 (11%)
Query: 2 ELGSVVEFLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNE 61
E+GS++ FLE KTILV G TGF+AK+F+EK+LRVQPNVKKL+L +RA+D SAA R QNE
Sbjct: 4 EVGSILNFLEGKTILVIGATGFLAKIFLEKVLRVQPNVKKLFLLLRASDDKSAASRLQNE 63
Query: 62 VLAKDVFNVLKEKWGTRLNSFISEKITFVPGDISSEDLGLKDSNLKEELWNELDIMVNSA 121
+LAKD+FN+L EK GT SFISEK+T VPGDI+ EDLGLKDS L+E++ ++ D+++N A
Sbjct: 64 ILAKDLFNLLNEKMGTNFKSFISEKLTVVPGDITFEDLGLKDSILREDISSQTDVIINLA 123
Query: 122 AITKFDERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAYVAGERTGLILENP---- 177
A T FDERYD+A +NT GV H+++FAK+C++LKV VHVSTAYV GE++GLILE+P
Sbjct: 124 ATTNFDERYDIALDLNTFGVKHIMSFAKQCIRLKVLVHVSTAYVCGEKSGLILESPYLLG 183
Query: 178 --LDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTK 235
L+G +GLD +AE K++ +KL EL+ KGA + EI + MK+LG RA ++GWPNTYVFTK
Sbjct: 184 DSLNGVAGLDINAEKKLVTEKLGELQEKGATEHEIKVAMKDLGITRANVYGWPNTYVFTK 243
Query: 236 TMGEMLMQQSKENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGE 295
+GEML+++ K NLS+VI+RP +V+GT +EPFPGWVE L+TI+ L V +G L C +G+
Sbjct: 244 ALGEMLVEKLKGNLSVVILRPAIVTGTLREPFPGWVEGLRTIDCLAVVYGKGKLTCFLGD 303
Query: 296 TKVIMDVIPVDMVVNAMIVAMVAHAKQPSDANIYHVGSSLRNPVTL-------------- 341
++D IP DMVVNAM+VAMVAHA QP D +YHVGSS+RNP+
Sbjct: 304 INGVVDAIPADMVVNAMLVAMVAHANQPRDG-VYHVGSSVRNPLRYQSFHDYGLKYFKAK 362
Query: 342 -------------------------------------GLQVANTVFHNFFKGVYNDLRKK 364
GL++ NT +F+G Y +L +K
Sbjct: 363 PWINKDGTVVKVGKMTILTNMASFQRYIFIRYLLPLKGLKLVNTALCQYFQGTYLELNRK 422
Query: 365 VKFVMRVVEIYKPYFYFNGIFDDTNTEKLRMTARGSRTETDLFYFDPDSIEWSDYFMNTH 424
++ VMR+VE+Y+PY +F GIFDD NTEKLRM+AR S TE DLFYFDP ++W DYFMNTH
Sbjct: 423 IQVVMRLVELYRPYLFFKGIFDDLNTEKLRMSARQSGTEIDLFYFDPKEMDWEDYFMNTH 482
Query: 425 IPGVEK 430
+PG+ K
Sbjct: 483 LPGLVK 488
|
Source: Medicago truncatula Species: Medicago truncatula Genus: Medicago Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|357453013|ref|XP_003596783.1| Fatty acyl-CoA reductase [Medicago truncatula] gi|355485831|gb|AES67034.1| Fatty acyl-CoA reductase [Medicago truncatula] | Back alignment and taxonomy information |
|---|
Score = 540 bits (1391), Expect = e-151, Method: Compositional matrix adjust.
Identities = 260/486 (53%), Positives = 344/486 (70%), Gaps = 58/486 (11%)
Query: 2 ELGSVVEFLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNE 61
E+GS++ FLE KTILV G TGF+AK+F+EK+LRVQPNVKKL+L +RA+D SAA R QNE
Sbjct: 4 EVGSILNFLEGKTILVIGATGFLAKIFLEKVLRVQPNVKKLFLLLRASDDKSAASRLQNE 63
Query: 62 VLAKDVFNVLKEKWGTRLNSFISEKITFVPGDISSEDLGLKDSNLKEELWNELDIMVNSA 121
+LAKD+FN+L EK GT SFISEK+T VPGDI+ EDLGLKDS L+E++ ++ D+++N A
Sbjct: 64 ILAKDLFNLLNEKMGTNFKSFISEKLTVVPGDITFEDLGLKDSILREDISSQTDVIINLA 123
Query: 122 AITKFDERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAYVAGERTGLILENP---- 177
A T FDERYD+A +NT GV H+++FAK+C++LKV VHVSTAYV GE++GLILE+P
Sbjct: 124 ATTNFDERYDIALDLNTFGVKHIMSFAKQCIRLKVLVHVSTAYVCGEKSGLILESPYLLG 183
Query: 178 --LDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTK 235
L+G +GLD +AE K++ +KL EL+ KGA + EI + MK+LG RA ++GWPNTYVFTK
Sbjct: 184 DSLNGVAGLDINAEKKLVTEKLGELQEKGATEHEIKVAMKDLGITRANVYGWPNTYVFTK 243
Query: 236 TMGEMLMQQSKENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGE 295
+GEML+++ K NLS+VI+RP +V+ T +EPFPGWVE L+TI++L V +G L C +G+
Sbjct: 244 ALGEMLVEKLKGNLSVVILRPAIVTSTLREPFPGWVEGLRTIDSLAVVYGKGKLTCFLGD 303
Query: 296 TKVIMDVIPVDMVVNAMIVAMVAHAKQPSDANIYHVGSSLRNPVTL-------------- 341
++D IP DMVVNAM+VAMVAHA QP D +YHVGSS+RNP+
Sbjct: 304 INGVVDAIPADMVVNAMLVAMVAHANQPRDG-VYHVGSSVRNPLRYQSFHDYGLKYFKAK 362
Query: 342 -------------------------------------GLQVANTVFHNFFKGVYNDLRKK 364
GL++ NT +F+G Y +L +K
Sbjct: 363 PWINKDGTVVKVGKMTILTNMASFQRYIFIRYLLPLKGLKLVNTALCQYFQGTYLELNRK 422
Query: 365 VKFVMRVVEIYKPYFYFNGIFDDTNTEKLRMTARGSRTETDLFYFDPDSIEWSDYFMNTH 424
++ VMR+VE+Y+PY +F GIFDD NTEKLRM+AR S TE DLFYFDP ++W DYFMNTH
Sbjct: 423 IQVVMRLVELYRPYLFFKGIFDDLNTEKLRMSARQSGTEIDLFYFDPKEMDWEDYFMNTH 482
Query: 425 IPGVEK 430
+PG+ K
Sbjct: 483 LPGLVK 488
|
Source: Medicago truncatula Species: Medicago truncatula Genus: Medicago Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|225436689|ref|XP_002263184.1| PREDICTED: fatty acyl-CoA reductase 3 [Vitis vinifera] gi|296084945|emb|CBI28354.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 535 bits (1377), Expect = e-149, Method: Compositional matrix adjust.
Identities = 263/487 (54%), Positives = 340/487 (69%), Gaps = 58/487 (11%)
Query: 1 MELGSVVEFLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQN 60
MELGS+VEFLENK+ILV+G TGF+AK+F+EKILR+QPNVKKL+L +RAAD SA R N
Sbjct: 1 MELGSIVEFLENKSILVTGATGFLAKIFVEKILRIQPNVKKLFLLLRAADTKSATQRLHN 60
Query: 61 EVLAKDVFNVLKEKWGTRLNSFISEKITFVPGDISSEDLGLKDSNLKEELWNELDIMVNS 120
EVL K++F VLK+KWG+ LNSFISEK+T +PGDIS E+LG+ + NL+EE+W E+D+++N
Sbjct: 61 EVLGKELFRVLKDKWGSNLNSFISEKVTPIPGDISCENLGVTNLNLREEIWREVDVILNL 120
Query: 121 AAITKFDERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAYVAGERTGLILENP--- 177
AA TKFDERYDVA GINTLG H++NF+KKCVKLK+ +HVSTAYV+GER GLILE+P
Sbjct: 121 AATTKFDERYDVALGINTLGASHVLNFSKKCVKLKMLLHVSTAYVSGEREGLILESPLKM 180
Query: 178 ---LDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFT 234
L+GASGLD D E K++++ LNEL A ++ I+L MK LG +RA ++GWPNTYVFT
Sbjct: 181 GKALNGASGLDVDKEKKLVEEGLNELNELQATEETISLTMKELGMKRALMYGWPNTYVFT 240
Query: 235 KTMGEMLMQQSKENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVG 294
K MGEML+ Q KENL LVI+RPT+++ TY EPF GW+E ++TI+ + +G L CL+
Sbjct: 241 KAMGEMLLGQFKENLPLVILRPTIITSTYMEPFSGWIEGIRTIDNVLAGYCKGKLTCLLA 300
Query: 295 ETKVIMDVIPVDMVVNAMIVAMVAHAKQPSDANIYHVGSSLRNPVTL------------- 341
+ + I+D IP DMVVN MIVAMVAHA QP + IY VGSSL+NP+ L
Sbjct: 301 DPECILDAIPGDMVVNCMIVAMVAHANQPCEI-IYQVGSSLKNPLKLLDLHDFFFKYFHE 359
Query: 342 ---------GLQVANT-------VFHNFFK----------------------GVYNDLRK 363
++V+ VFH + G+ D +
Sbjct: 360 NPWINKDGKAVKVSKLILFSTTFVFHGYLAVRYMLPLKVLQFLNFLLCQILCGMCTDHNR 419
Query: 364 KVKFVMRVVEIYKPYFYFNGIFDDTNTEKLRMTARGSRTETDLFYFDPDSIEWSDYFMNT 423
K+K +M +VE+YKPY +F GIFDD NT+KLR+ A S ++ DLFYFDP I+W DYF+N
Sbjct: 420 KIKMLMYLVELYKPYLFFKGIFDDLNTDKLRLAATESSSKADLFYFDPKCIDWEDYFINI 479
Query: 424 HIPGVEK 430
HIPGV K
Sbjct: 480 HIPGVLK 486
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|388500498|gb|AFK38315.1| unknown [Medicago truncatula] | Back alignment and taxonomy information |
|---|
Score = 534 bits (1375), Expect = e-149, Method: Compositional matrix adjust.
Identities = 256/486 (52%), Positives = 329/486 (67%), Gaps = 57/486 (11%)
Query: 2 ELGSVVEFLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNE 61
+ GS+ FLE+K +LV G GF+AK+F+EKILRVQPNVKKLYL +RA D +SA R NE
Sbjct: 3 QFGSIAHFLEDKNVLVLGAAGFLAKIFVEKILRVQPNVKKLYLLLRATDAESATRRMHNE 62
Query: 62 VLAKDVFNVLKEKWGTRLNSFISEKITFVPGDISSEDLGLKDSNLKEELWNELDIMVNSA 121
+L KD+F +LKE G + NSFISEK+T VPGDIS E+ LKDSNL +EL+N+ D++VN A
Sbjct: 63 ILRKDLFKLLKENHGAKFNSFISEKVTMVPGDISQENFNLKDSNLLQELYNKTDVIVNLA 122
Query: 122 AITKFDERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAYVAGERTGLILENP---- 177
A T FDERYDVA G+NT G H++NFAK C+ L+V VHVSTAYV GER GLI+E+P
Sbjct: 123 ATTNFDERYDVALGLNTFGAKHVLNFAKNCINLRVLVHVSTAYVCGERGGLIVEDPYQLG 182
Query: 178 --LDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTK 235
L+G GLD D E +V+++KLN L+ +GA +K+ + MK+LG ERAKL+GWPNTYVFTK
Sbjct: 183 VSLNGVQGLDIDEEKRVVEEKLNMLQQEGATEKDTRIAMKDLGMERAKLYGWPNTYVFTK 242
Query: 236 TMGEMLMQQSKENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGE 295
MGEML+ KE LS+VI+RPT+++ TYKEPFPGWVE ++TI++L VA +G L C + +
Sbjct: 243 AMGEMLVGTMKEKLSIVIVRPTIITSTYKEPFPGWVEGVRTIDSLIVAYGKGKLTCFLAD 302
Query: 296 TKVIMDVIPVDMVVNAMIVAMVAHAKQPSDANIYHVGSSLRNPVTL-------------- 341
+ + DVIP DMVVNAM+VAMV+HA QP D +IYHVGSS+ NPV
Sbjct: 303 LEAVFDVIPADMVVNAMLVAMVSHANQPCDDSIYHVGSSVGNPVRYESLRDYCFRYFTAK 362
Query: 342 -------------------------------------GLQVANTVFHNFFKGVYNDLRKK 364
GL++ N F +F+ D+ +K
Sbjct: 363 PCFDKEGKAIKVGKVTVLENMNSFQRYMYIRYLLPLKGLELVNAAFCRYFQSTCFDISRK 422
Query: 365 VKFVMRVVEIYKPYFYFNGIFDDTNTEKLRMTARGSRTETDLFYFDPDSIEWSDYFMNTH 424
V VMR+VE+Y+PY +FNG+FD+ N EKL++ AR S E DLFYFDP I W DYFMN H
Sbjct: 423 VHTVMRLVELYRPYVFFNGVFDNMNAEKLQIAARQSGVEMDLFYFDPKMINWEDYFMNIH 482
Query: 425 IPGVEK 430
IPG+ K
Sbjct: 483 IPGIVK 488
|
Source: Medicago truncatula Species: Medicago truncatula Genus: Medicago Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|147852421|emb|CAN81280.1| hypothetical protein VITISV_041831 [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 533 bits (1372), Expect = e-148, Method: Compositional matrix adjust.
Identities = 259/466 (55%), Positives = 335/466 (71%), Gaps = 37/466 (7%)
Query: 1 MELGSVVEFLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQN 60
MELGS+VEFLENK+ILV+G TGF+AK+F+EKILR+QPNVKKL+L +RAAD SA R N
Sbjct: 1 MELGSIVEFLENKSILVTGATGFLAKIFVEKILRIQPNVKKLFLLLRAADTKSATQRLHN 60
Query: 61 EVLAKDVFNVLKEKWGTRLNSFISEKITFVPGDISSEDLGLKDSNLKEELWNELDIMVNS 120
EVL K++F VL++KWG+ LNSFISEK+T + GDIS E+LG+ + NL+EE+W E+D+++N
Sbjct: 61 EVLGKELFRVLRDKWGSNLNSFISEKVTPISGDISCENLGVTNLNLREEIWREVDVILNL 120
Query: 121 AAITKFDERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAYVAGERTGLILENP--- 177
AA TKFDERYDVA GINTLG H++NF+KKCVKLK+ +HVSTAYV+GER GLILE+P
Sbjct: 121 AATTKFDERYDVALGINTLGASHVLNFSKKCVKLKMLLHVSTAYVSGEREGLILESPLKM 180
Query: 178 ---LDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFT 234
L+GASGLD D E K++++ LNEL A ++ I+L MK LG +RA ++GWPNTYVFT
Sbjct: 181 GKALNGASGLDVDKEKKLVEEGLNELNELQATEETISLTMKELGMKRALMYGWPNTYVFT 240
Query: 235 KTMGEMLMQQSKENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVG 294
K MGEML+ Q KENL LVI+RPT+++ TY EPF GW+E ++TI+++ +G L C +
Sbjct: 241 KAMGEMLLGQFKENLPLVILRPTIITSTYMEPFSGWIEGIRTIDSVLATYCKGKLTCFLA 300
Query: 295 ETKVIMDVIPVDMVVNAMIVAMVAHAKQPSDANIYHVGSSLRNPVTL------------- 341
+ + I+D IP DMVVN MIVAMVAHA QP + IY VGSSL+NP+ L
Sbjct: 301 DPECILDAIPGDMVVNCMIVAMVAHANQPCEM-IYQVGSSLKNPLKLLDLHDFFFKYFHE 359
Query: 342 ------------GLQVANTVFHNFFKGVYNDLRKKVKFVMRVVEIYKPYFYFNGI----- 384
LQ N + G+ D +K+K +M +VE+YKPY +F GI
Sbjct: 360 NPWINKDGKAVKVLQFLNFLLCQILXGMCXDHNRKIKMLMYLVELYKPYLFFKGIYAPYS 419
Query: 385 FDDTNTEKLRMTARGSRTETDLFYFDPDSIEWSDYFMNTHIPGVEK 430
FDD NT+KLR+ A S ++ DLFYFDP I+W DYF+N HIPGV K
Sbjct: 420 FDDLNTDKLRLAATESSSKADLFYFDPKXIDWEDYFINIHIPGVLK 465
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 519 | ||||||
| TAIR|locus:2134278 | 493 | CER4 "ECERIFERUM 4" [Arabidops | 0.651 | 0.685 | 0.518 | 2.3e-116 | |
| TAIR|locus:2076028 | 493 | FAR4 "fatty acid reductase 4" | 0.643 | 0.677 | 0.504 | 3e-110 | |
| TAIR|locus:2171107 | 491 | FAR1 "fatty acid reductase 1" | 0.653 | 0.690 | 0.498 | 7.1e-109 | |
| TAIR|locus:2076023 | 496 | FAR5 "fatty acid reductase 5" | 0.691 | 0.723 | 0.494 | 8.1e-108 | |
| TAIR|locus:2076038 | 496 | FAR8 "fatty acid reductase 8" | 0.691 | 0.723 | 0.481 | 6.5e-106 | |
| TAIR|locus:2176407 | 409 | FAR7 "fatty acid reductase 7" | 0.464 | 0.589 | 0.399 | 3.1e-79 | |
| TAIR|locus:2088664 | 616 | MS2 "MALE STERILITY 2" [Arabid | 0.662 | 0.558 | 0.391 | 5.9e-76 | |
| DICTYBASE|DDB_G0289081 | 1279 | DDB_G0289081 "phospholipid/gly | 0.342 | 0.139 | 0.314 | 9.8e-32 | |
| UNIPROTKB|Q0P5J1 | 515 | FAR2 "Fatty acyl-CoA reductase | 0.410 | 0.413 | 0.313 | 1.2e-31 | |
| UNIPROTKB|Q96K12 | 515 | FAR2 "Fatty acyl-CoA reductase | 0.406 | 0.409 | 0.296 | 6.3e-31 |
| TAIR|locus:2134278 CER4 "ECERIFERUM 4" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 920 (328.9 bits), Expect = 2.3e-116, Sum P(2) = 2.3e-116
Identities = 179/345 (51%), Positives = 244/345 (70%)
Query: 1 MELGSVVEFLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQN 60
ME+ SV+++L+NK+ILV G GF+A +F+EKILRV PNVKKLYL +RA+ SA RF +
Sbjct: 5 MEVVSVLKYLDNKSILVVGAAGFLANIFVEKILRVAPNVKKLYLLLRASKGKSATQRFND 64
Query: 61 EVLAKDVFNVLKEKWGTRLNSFISEKITFVPGDISSEDLGLKDSNLKEELWNELDIMVNS 120
E+L KD+F VLKEK+G LN SEKIT V GDI EDLGL+D +L E+ +++D +VN
Sbjct: 65 EILKKDLFKVLKEKYGPNLNQLTSEKITIVDGDICLEDLGLQDFDLAHEMIHQVDAIVNL 124
Query: 121 AAITKFDERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAYVAGERTGLILENP--- 177
AA TKFDERYDVA GINTLG ++++NFAK+C K+K+ VHVSTAYV GE++GLI+E P
Sbjct: 125 AATTKFDERYDVALGINTLGALNVLNFAKRCAKVKILVHVSTAYVCGEKSGLIMETPYRM 184
Query: 178 ---LDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFT 234
L+G +GLD + E K++ +KL++L+ GA + IT MK+LG RAK++GWPNTYVFT
Sbjct: 185 GETLNGTTGLDINYEKKLVQEKLDQLRVIGAAPETITETMKDLGLRRAKMYGWPNTYVFT 244
Query: 235 KTMGEMLMQQSKENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVG 294
K MGEM++ +ENLSLV++RP++++ T+KEPFPGW E ++TI++L V +G L C +
Sbjct: 245 KAMGEMMVGTKRENLSLVLLRPSIITSTFKEPFPGWTEGIRTIDSLAVGYGKGKLTCFLC 304
Query: 295 ETKXXXXXXXXXXXXXXXXXXXXXHAKQPSDANIYHVGSSLRNPV 339
+ A + + IYHVGSSLRNP+
Sbjct: 305 DLDAVSDVMPADMVVNSILVSMAAQAGKQEEI-IYHVGSSLRNPM 348
|
|
| TAIR|locus:2076028 FAR4 "fatty acid reductase 4" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 895 (320.1 bits), Expect = 3.0e-110, Sum P(2) = 3.0e-110
Identities = 172/341 (50%), Positives = 239/341 (70%)
Query: 7 VEFLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKD 66
++FL +KTILV+GV GF+AKVF+EKILR+QP VKKL+L +RAAD +SA RF +EVL KD
Sbjct: 6 IQFLHDKTILVTGVPGFLAKVFVEKILRIQPKVKKLFLLLRAADNESAMQRFHSEVLEKD 65
Query: 67 VFNVLKEKWGTR-LNSFISEKITFVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITK 125
+F VLK G L +FI+EK+ +PGDIS ++LG+K S+L + +WNE+DI+VN AA T
Sbjct: 66 LFRVLKNALGDENLKAFITEKVVPIPGDISVDNLGVKGSDLLQHMWNEIDIIVNVAATTN 125
Query: 126 FDERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAYVAGERTGLILENP------LD 179
FDERYDV +NT G ++++NFAKKCVK ++ +HVSTAYV GE++GL+ E L+
Sbjct: 126 FDERYDVGLSVNTFGPLNVLNFAKKCVKGQLLLHVSTAYVRGEKSGLLHEKTFHMGETLN 185
Query: 180 GASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGE 239
G L + EM+++ QKL EL+ + ++EI+ MK+LG RAKLHGWPNTYVFTK+MGE
Sbjct: 186 GHRKLVIETEMELMKQKLKELQKQNCSEEEISQSMKDLGMSRAKLHGWPNTYVFTKSMGE 245
Query: 240 MLMQQSKENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKXX 299
ML+ +ENL +VIIRPT+++ T+ EPFPGW+E L+TI+++ VA +G L+C + +
Sbjct: 246 MLLGNYRENLPIVIIRPTMITSTFSEPFPGWIEGLRTIDSVIVAYGKGRLKCFLADPNSV 305
Query: 300 XXXXXXXXXXXXXXXXXXXHAKQPSDANIYHVGSSLRNPVT 340
HA + +YHVGSS +NP+T
Sbjct: 306 LDLIPVDMVANAMVTAAAIHAGKLGSQTVYHVGSSCKNPIT 346
|
|
| TAIR|locus:2171107 FAR1 "fatty acid reductase 1" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 871 (311.7 bits), Expect = 7.1e-109, Sum P(2) = 7.1e-109
Identities = 174/349 (49%), Positives = 236/349 (67%)
Query: 1 MELGSVVEFLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQN 60
ME + V+FL NKTIL++G GF+AKV +EKILR+QPNVKK+YL +RA D SA R ++
Sbjct: 1 ME-SNCVQFLGNKTILITGAPGFLAKVLVEKILRLQPNVKKIYLLLRAPDEKSAMQRLRS 59
Query: 61 EVLAKDVFNVLKEKWGT-RLNSFISEKITFVPGDISSEDLGLKDSNLKEELWNELDIMVN 119
EV+ D+F VL+ G LN+ + EKI VPGDIS ++LGLKD++L + +W+E+DI++N
Sbjct: 60 EVMEIDLFKVLRNNLGEDNLNALMREKIVPVPGDISIDNLGLKDTDLIQRMWSEIDIIIN 119
Query: 120 SAAITKFDERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAYVAGERTGLILENP-- 177
AA T FDERYD+ GINT G ++++NFAKKCVK ++ +HVSTAY++GE+ GL+LE P
Sbjct: 120 IAATTNFDERYDIGLGINTFGALNVLNFAKKCVKGQLLLHVSTAYISGEQPGLLLEKPFK 179
Query: 178 ----LDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVF 233
L G LD + E ++ QKL EL+ +EI+ MK+ G RAKLHGWPNTYVF
Sbjct: 180 MGETLSGDRELDINIEHDLMKQKLKELQD--CSDEEISQTMKDFGMARAKLHGWPNTYVF 237
Query: 234 TKTMGEMLMQQSKENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLV 293
TK MGEMLM + +ENL LVIIRPT+++ T EPFPGW+E LKT++++ VA +G L+C +
Sbjct: 238 TKAMGEMLMGKYRENLPLVIIRPTMITSTIAEPFPGWIEGLKTLDSVIVAYGKGRLKCFL 297
Query: 294 GETKXXXXXXXXXXXXXXXXXXXXXHAKQPSDANIYHVGSSLRNPVTLG 342
++ H+ IYHVGSS +NPVT G
Sbjct: 298 ADSNSVFDLIPADMVVNAMVAAATAHSGDTGIQAIYHVGSSCKNPVTFG 346
|
|
| TAIR|locus:2076023 FAR5 "fatty acid reductase 5" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 908 (324.7 bits), Expect = 8.1e-108, Sum P(2) = 8.1e-108
Identities = 184/372 (49%), Positives = 252/372 (67%)
Query: 1 MELGSVVEFLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQN 60
MEL + V+FL NKTILV+G TGF+AKVF+EKILRVQPNVKKLYL VRA+D ++A R +
Sbjct: 1 MEL-NCVQFLRNKTILVTGATGFLAKVFVEKILRVQPNVKKLYLLVRASDNEAATKRLRT 59
Query: 61 EVLAKDVFNVLKEKWGT-RLNSFISEKITFVPGDISSEDLGLKDSNLKEELWNELDIMVN 119
EV K++F VL++ G +LN+ + EK+ VPGDI+++ LG+ DS+L+E + E+DI+VN
Sbjct: 60 EVFEKELFKVLRQNLGDEKLNTLLYEKVVSVPGDIATDQLGINDSHLRERMQKEIDIVVN 119
Query: 120 SAAITKFDERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAYVAGERTGLILENP-- 177
AA T FDERYDV GINT G ++++NFAKKCVK+++ +HVSTAYV GE+ GLI E P
Sbjct: 120 VAATTNFDERYDVGLGINTFGALNVLNFAKKCVKVQLLLHVSTAYVCGEKPGLIPEKPFI 179
Query: 178 ---LDGASGL--DFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYV 232
+ +GL D + E +++ Q+L EL + +++ITL MK LG ERAKLHGWPNTYV
Sbjct: 180 MEEIRNENGLQLDINLERELMKQRLKELNEQDCSEEDITLSMKELGMERAKLHGWPNTYV 239
Query: 233 FTKTMGEMLMQQSKENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCL 292
FTK+MGEML+ + KENL LVIIRPT+++ T EPFPGW+E L+T++++ +A +G L+C
Sbjct: 240 FTKSMGEMLLGKHKENLPLVIIRPTMITSTLSEPFPGWIEGLRTVDSVIIAYGKGVLKCF 299
Query: 293 VGETKXXXXXXXXXXXXXXXXXXXXXHAKQPSDANIYHVGSSLRNPVTLGLQVANTVFHN 352
+ + HA +YHVGSS +NPVT G ++
Sbjct: 300 LVDVNSVCDMIPVDMVANAMITAAAKHAGGSGVHMVYHVGSSHQNPVTFG-EIHEIAVRY 358
Query: 353 FFKGVYNDLRKK 364
F K N LR +
Sbjct: 359 FTK---NPLRSR 367
|
|
| TAIR|locus:2076038 FAR8 "fatty acid reductase 8" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 886 (316.9 bits), Expect = 6.5e-106, Sum P(2) = 6.5e-106
Identities = 179/372 (48%), Positives = 244/372 (65%)
Query: 1 MELGSVVEFLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQN 60
ME S V FL+NKTILV+G TGF+AKVF+EKILRVQPNV KLYL VRA+D ++A R +
Sbjct: 1 MEF-SCVHFLQNKTILVTGATGFLAKVFVEKILRVQPNVNKLYLVVRASDNEAATKRLRT 59
Query: 61 EVLAKDVFNVLKEKWGT-RLNSFISEKITFVPGDISSEDLGLKDSNLKEELWNELDIMVN 119
E KD+F VL++ G +LN+ +SEK+ V GDI+ + LG+KDSNL+E + E+DI+VN
Sbjct: 60 EAFEKDLFKVLRDNLGDEKLNTLLSEKVVPVAGDIAMDHLGMKDSNLRERMQKEIDIVVN 119
Query: 120 SAAITKFDERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAYVAGERTGLILENPL- 178
AA T FDERYD+ GINT G ++++NFAKKCVK ++ +HVSTAYV GE+ GL+ E P
Sbjct: 120 VAATTNFDERYDIGLGINTFGALNVLNFAKKCVKAQLLLHVSTAYVCGEKPGLLPEKPFV 179
Query: 179 ------DGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYV 232
+ LD + E +++ Q+L EL +G ++ T +MK LG ERAKLHGWPNTYV
Sbjct: 180 MEEICNENGLQLDINLERELMKQRLKELNEQGCSEEGTTFYMKELGMERAKLHGWPNTYV 239
Query: 233 FTKTMGEMLMQQSKENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCL 292
FTK+MGEML+ KENL LVIIRPT+++ T EPFPGW+E L+T++++ +A +G L+C
Sbjct: 240 FTKSMGEMLLGNHKENLPLVIIRPTMITSTLFEPFPGWIEGLRTVDSVIIAYGKGVLKCF 299
Query: 293 VGETKXXXXXXXXXXXXXXXXXXXXXHAKQPSDANIYHVGSSLRNPVTLGLQVANTVFHN 352
+ + HA +Y VGSS +NP+ G ++ +F
Sbjct: 300 LVDVNSVCDMIPADMVANAMIAAAATHAGGSKVHMVYQVGSSHQNPIIYG-EIREILFCY 358
Query: 353 FFKGVYNDLRKK 364
F K N LR +
Sbjct: 359 FTK---NSLRSR 367
|
|
| TAIR|locus:2176407 FAR7 "fatty acid reductase 7" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 505 (182.8 bits), Expect = 3.1e-79, Sum P(3) = 3.1e-79
Identities = 99/248 (39%), Positives = 149/248 (60%)
Query: 114 LDIMVNSAAITKFDERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAYVAGERTGLI 173
L ++V ++ ++RYDVA GINT G I+++NFAKKCVK K+ +HVST YV GER G I
Sbjct: 41 LYLLVRASDKKSAEQRYDVALGINTFGAINVLNFAKKCVKPKLLLHVSTVYVCGERPGHI 100
Query: 174 LEN------PLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGW 227
+E L+G + +D + E ++ DQK + K +G ++E MK+ G +RA+L+GW
Sbjct: 101 VEKHFAMGESLNGKNKVDINTERRLADQKSKQFKEQGCSEEETEQAMKDFGLKRARLYGW 160
Query: 228 PNTYVFTKTMGEMLMQQSKENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQG 287
PNTYVFTK MGEML+ +E + +VIIRPT+++ T+ +PFPGW+E LKT++++ + +G
Sbjct: 161 PNTYVFTKAMGEMLLGHYRETMPIVIIRPTIITSTFSDPFPGWIEGLKTVDSVIIFYGKG 220
Query: 288 NLRCLVGETKXXXXXXXXXXXXXXXXXXXXXHAKQPSDANIYHVGSSLRNPVTLGLQVAN 347
L+C + + K H +YHVGSS +NPV + Q+
Sbjct: 221 ILKCFLVDQKTVCDIIPVDMVVNAMIAIAADHCHDSGSHTVYHVGSSNQNPV-IYKQIYE 279
Query: 348 TVFHNFFK 355
+ F K
Sbjct: 280 MMSRYFMK 287
|
|
| TAIR|locus:2088664 MS2 "MALE STERILITY 2" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 644 (231.8 bits), Expect = 5.9e-76, Sum P(2) = 5.9e-76
Identities = 144/368 (39%), Positives = 217/368 (58%)
Query: 3 LGSVVEFLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEV 62
LG ++ FL+ K L++G TGF+AKV IEK+LR+ P+V K+YL ++A ++A R +NEV
Sbjct: 122 LG-IISFLQGKKFLITGSTGFLAKVLIEKVLRMAPDVSKIYLLIKAKSKEAAIERLKNEV 180
Query: 63 LAKDVFNVLKEKWGTRLNSFISEKITFVPGDISSEDLGLKDSNLKEELWNELDIMVNSAA 122
L ++FN LKE G SF+ K+ V G+I ++GL+ ++ EE+ E+D+++NSAA
Sbjct: 181 LDAELFNTLKETHGASYMSFMLTKLIPVTGNICDSNIGLQ-ADSAEEIAKEVDVIINSAA 239
Query: 123 ITKFDERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAYVAGERTGLILENP----- 177
T F+ERYDVA INT G +L+ FAKKC KLK+F+ VSTAYV G+R G I+E P
Sbjct: 240 NTTFNERYDVALDINTRGPGNLMGFAKKCKKLKLFLQVSTAYVNGQRQGRIMEKPFSMGD 299
Query: 178 -------LDG-ASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPN 229
L+G LD D EMK+ E KG ++ MK+LG ERA+ +GW +
Sbjct: 300 CIATENFLEGNRKALDVDREMKLA----LEAARKGTQNQDEAQKMKDLGLERARSYGWQD 355
Query: 230 TYVFTKTMGEMLMQQSKENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNL 289
TYVFTK MGEM++ ++ ++ +VIIRP+V+ TYK+PFPGW+E + ++ + + +G L
Sbjct: 356 TYVFTKAMGEMMINSTRGDVPVVIIRPSVIESTYKDPFPGWMEGNRMMDPIVLCYGKGQL 415
Query: 290 RCLVGETKXXXXXXXXXXXXXXXXXXXXXHAKQPSDA----NIYHVGSSLRNPVTLGLQV 345
+ + K H SD N+Y + SS NP+ +
Sbjct: 416 TGFLVDPKGVLDVVPADMVVNATLAAIAKHGMAMSDPEPEINVYQIASSAINPLVFE-DL 474
Query: 346 ANTVFHNF 353
A +++++
Sbjct: 475 AELLYNHY 482
|
|
| DICTYBASE|DDB_G0289081 DDB_G0289081 "phospholipid/glycerol acyltransferase domain-containing protein" [Dictyostelium discoideum (taxid:44689)] | Back alignment and assigned GO terms |
|---|
Score = 267 (99.0 bits), Expect = 9.8e-32, Sum P(2) = 9.8e-32
Identities = 60/191 (31%), Positives = 110/191 (57%)
Query: 6 VVEFLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAK 65
+ F KT+L++G TGFV KV +EK++R P+++K+Y+ +R +A RF+ ++L
Sbjct: 4 LANFYAGKTVLITGATGFVGKVLLEKMVRDLPDIEKIYIIIRG----NAKERFEEDILQS 59
Query: 66 DVFNVLKEKWG-TRLNSFISEKITFVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAIT 124
+++ K K G N+ I K+ + GD+S E LGL + + + ++++++++ AA
Sbjct: 60 RIWDTCKAKMGEAAFNAHIHNKVVAIGGDLSKEGLGLSSEDYQTVV-DQVNVIIHCAASI 118
Query: 125 KFDERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAYVAGERTGLILEN-PLDGASG 183
F ER D A N +++++ +K+ + +VH STAYV R G + E P+
Sbjct: 119 DFRERLDKAISSNLYASLNMLDLSKRLKNVVAYVHCSTAYVNSNREGWLDEELPV----- 173
Query: 184 LDFDAEMKVID 194
LDF+ E +++D
Sbjct: 174 LDFNPE-EMVD 183
|
|
| UNIPROTKB|Q0P5J1 FAR2 "Fatty acyl-CoA reductase 2" [Bos taurus (taxid:9913)] | Back alignment and assigned GO terms |
|---|
Score = 216 (81.1 bits), Expect = 1.2e-31, Sum P(2) = 1.2e-31
Identities = 72/230 (31%), Positives = 101/230 (43%)
Query: 223 KLHG-WPNTYVFTKTMGEMLMQQSKENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLF 281
KL G WPNTY +TK +GE+++QQ NL++ IIRP+++ T++EPFPGWV++L + L
Sbjct: 195 KLIGDWPNTYTYTKALGEVVVQQEGGNLNIAIIRPSIMGATWQEPFPGWVDNLNGPSGLI 254
Query: 282 VASAQGNLRCLVGETKXXXXXXXXXXXXXXXXXXXXXHA-KQPSDANIYHVGSSLRNPVT 340
+A+ +G LR + A +P +YH S NP
Sbjct: 255 IAAGKGFLRSIRATPMAVADLIPADTVVNLTLAVGWYTAVHRPKSTLVYHCTSGNLNPCN 314
Query: 341 ---LGLQVANTV----FHNFFKGVYNDLRKK--VKFVMRVVEIYKPYFYFNGIFDDTNTE 391
+GLQV T F F+ D V P ++ T
Sbjct: 315 WGKMGLQVLATFEKIPFERAFRRPNADFTTNNITTHYWNAVSHRAPAIIYDFYLRLTG-R 373
Query: 392 KLRMTA---RGSRTETDLFYFDPDSIEWSDYFMNTHIPGVEKLLQQKRSF 438
K RMT R RT + L YF S EWS Y NT + E + +R F
Sbjct: 374 KPRMTKLMNRLLRTLSMLEYFVNRSWEWSTY--NTEMLMSELSPEDQRVF 421
|
|
| UNIPROTKB|Q96K12 FAR2 "Fatty acyl-CoA reductase 2" [Homo sapiens (taxid:9606)] | Back alignment and assigned GO terms |
|---|
Score = 216 (81.1 bits), Expect = 6.3e-31, Sum P(2) = 6.3e-31
Identities = 68/229 (29%), Positives = 101/229 (44%)
Query: 224 LHGWPNTYVFTKTMGEMLMQQSKENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVA 283
+ WPN Y +TK +GEM++QQ NL++ IIRP++V T++EPFPGWV+++ N + +A
Sbjct: 197 IRDWPNIYTYTKALGEMVVQQESRNLNIAIIRPSIVGATWQEPFPGWVDNINGPNGIIIA 256
Query: 284 SAQGNLRCLVGETKXXXXXXXXXXXXXXXXXXXXXHA-KQPSDANIYHVGSSLRNPVT-- 340
+ +G LR + A +P +YH+ S NP
Sbjct: 257 TGKGFLRAIKATPMAVADVIPVDTVVNLMLAVGWYTAVHRPKSTLVYHITSGNMNPCNWH 316
Query: 341 -LGLQVANTV----FHNFFKGVYNDLRKKVKFVMR---VVEIYKPYFYFNGIFDDTNTEK 392
+G+QV T F F+ + F + V P ++ T K
Sbjct: 317 KMGVQVLATFEKIPFERPFRRPNANFTSN-SFTSQYWNAVSHRAPAIIYDCYLRLTG-RK 374
Query: 393 LRMTA---RGSRTETDLFYFDPDSIEWSDYFMNTHIPGVEKLLQQKRSF 438
RMT R RT + L YF S EWS Y NT + E + +R F
Sbjct: 375 PRMTKLMNRLLRTVSMLEYFINRSWEWSTY--NTEMLMSELSPEDQRVF 421
|
|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries 
Original result of BLAST against SWISS-PROT
ID ![]() | Name ![]() | Annotated EC number ![]() | Identity ![]() | Query coverage ![]() | Hit coverage ![]() | RBH(Q2H) ![]() | RBH(H2Q) ![]() |
| Q93ZB9 | FACR3_ARATH | 1, ., 2, ., 1, ., n, 2 | 0.4722 | 0.8265 | 0.8701 | yes | no |
| Q9XGY7 | FAR_SIMCH | 1, ., 2, ., 1, ., 8, 4 | 0.5154 | 0.8227 | 0.8661 | N/A | no |
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
| Your Input: | |||||||||||
| GSVIVG00011405001 | SubName- Full=Chromosome chr6 scaffold_305, whole genome shotgun sequence; (490 aa) | ||||||||||
(Vitis vinifera) | |||||||||||
Predicted Functional Partners: | |||||||||||
| Sorry, there are no predicted associations at the current settings. | |||||||||||
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 519 | |||
| PLN02996 | 491 | PLN02996, PLN02996, fatty acyl-CoA reductase | 0.0 | |
| PLN02503 | 605 | PLN02503, PLN02503, fatty acyl-CoA reductase 2 | 1e-125 | |
| cd05236 | 320 | cd05236, FAR-N_SDR_e, fatty acyl CoA reductases (F | 1e-102 | |
| pfam07993 | 245 | pfam07993, NAD_binding_4, Male sterility protein | 4e-79 | |
| cd05263 | 293 | cd05263, MupV_like_SDR_e, Pseudomonas fluorescens | 6e-23 | |
| cd05235 | 290 | cd05235, SDR_e1, extended (e) SDRs, subgroup 1 | 4e-20 | |
| TIGR01746 | 367 | TIGR01746, Thioester-redct, thioester reductase do | 4e-16 | |
| cd09071 | 92 | cd09071, FAR_C, C-terminal domain of fatty acyl Co | 3e-12 | |
| COG3320 | 382 | COG3320, COG3320, Putative dehydrogenase domain of | 4e-12 | |
| TIGR03443 | 1389 | TIGR03443, alpha_am_amid, L-aminoadipate-semialdeh | 6e-10 | |
| PRK07201 | 657 | PRK07201, PRK07201, short chain dehydrogenase; Pro | 5e-09 | |
| cd08946 | 200 | cd08946, SDR_e, extended (e) SDRs | 1e-08 | |
| pfam03015 | 94 | pfam03015, Sterile, Male sterility protein | 2e-08 | |
| COG1091 | 281 | COG1091, RfbD, dTDP-4-dehydrorhamnose reductase [C | 4e-06 | |
| COG0451 | 314 | COG0451, WcaG, Nucleoside-diphosphate-sugar epimer | 5e-05 | |
| pfam04321 | 284 | pfam04321, RmlD_sub_bind, RmlD substrate binding d | 1e-04 | |
| cd05246 | 315 | cd05246, dTDP_GD_SDR_e, dTDP-D-glucose 4,6-dehydra | 1e-04 | |
| COG1028 | 251 | COG1028, FabG, Dehydrogenases with different speci | 1e-04 | |
| TIGR01214 | 287 | TIGR01214, rmlD, dTDP-4-dehydrorhamnose reductase | 4e-04 | |
| TIGR01181 | 317 | TIGR01181, dTDP_gluc_dehyt, dTDP-glucose 4,6-dehyd | 0.001 | |
| cd05254 | 280 | cd05254, dTDP_HR_like_SDR_e, dTDP-6-deoxy-L-lyxo-4 | 0.002 | |
| PRK09186 | 256 | PRK09186, PRK09186, flagellin modification protein | 0.004 |
| >gnl|CDD|215538 PLN02996, PLN02996, fatty acyl-CoA reductase | Back alignment and domain information |
|---|
Score = 640 bits (1653), Expect = 0.0
Identities = 264/487 (54%), Positives = 330/487 (67%), Gaps = 58/487 (11%)
Query: 2 ELGSVVEFLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNE 61
E GS V+FLENKTILV+G TGF+AK+F+EKILRVQPNVKKLYL +RA+D SA R +E
Sbjct: 1 EEGSCVQFLENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRASDAKSATQRLHDE 60
Query: 62 VLAKDVFNVLKEKWGTRLNSFISEKITFVPGDISSEDLGLKDSNLKEELWNELDIMVNSA 121
V+ KD+F VL+EK G LNS ISEK+T VPGDIS +DLG+KDSNL+EE+W E+DI+VN A
Sbjct: 61 VIGKDLFKVLREKLGENLNSLISEKVTPVPGDISYDDLGVKDSNLREEMWKEIDIVVNLA 120
Query: 122 AITKFDERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAYVAGERTGLILENP---- 177
A T FDERYDVA GINTLG ++++NFAKKCVK+K+ +HVSTAYV GE++GLILE P
Sbjct: 121 ATTNFDERYDVALGINTLGALNVLNFAKKCVKVKMLLHVSTAYVCGEKSGLILEKPFHMG 180
Query: 178 --LDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTK 235
L+G LD + E K++ +KL EL + A ++EIT MK+LG ERAKLHGWPNTYVFTK
Sbjct: 181 ETLNGNRKLDINEEKKLVKEKLKELNEQDASEEEITQAMKDLGMERAKLHGWPNTYVFTK 240
Query: 236 TMGEMLMQQSKENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGE 295
MGEML+ KENL LVIIRPT+++ TYKEPFPGW+E L+TI+++ V +G L C + +
Sbjct: 241 AMGEMLLGNFKENLPLVIIRPTMITSTYKEPFPGWIEGLRTIDSVIVGYGKGKLTCFLAD 300
Query: 296 TKVIMDVIPVDMVVNAMIVAMVAHAKQPSDANIYHVGSSLRNPVTL-------------- 341
++DVIP DMVVNAMIVAM AHA IYHVGSSL+NPV
Sbjct: 301 PNSVLDVIPADMVVNAMIVAMAAHAGGQGSEIIYHVGSSLKNPVKFSNLHDFAYRYFSKN 360
Query: 342 -------------------------------------GLQVANTVFHNFFKGVYNDLRKK 364
LQ+ N + + Y DL +K
Sbjct: 361 PWINKEGSPVKVGKGTILSTMASFSLYMTIRYLLPLKALQLVNIILPKRYGDKYTDLNRK 420
Query: 365 VKFVMRVVEIYKPYFYFNGIFDDTNTEKLRMTARG-SRTETDLFYFDPDSIEWSDYFMNT 423
+K VMR+V++YKPY +F GIFDDTNTEKLR+ + + E D+F FDP SI+W DY N
Sbjct: 421 IKLVMRLVDLYKPYVFFKGIFDDTNTEKLRIKRKETGKEEADMFDFDPKSIDWEDYMTNV 480
Query: 424 HIPGVEK 430
HIPG+ K
Sbjct: 481 HIPGLVK 487
|
Length = 491 |
| >gnl|CDD|215279 PLN02503, PLN02503, fatty acyl-CoA reductase 2 | Back alignment and domain information |
|---|
Score = 379 bits (974), Expect = e-125
Identities = 182/501 (36%), Positives = 273/501 (54%), Gaps = 79/501 (15%)
Query: 6 VVEFLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAK 65
+ EFL K L++G TGF+AKV IEKILR P+V K+YL ++A D ++A R +NEV+
Sbjct: 113 IAEFLRGKNFLITGATGFLAKVLIEKILRTNPDVGKIYLLIKAKDKEAAIERLKNEVIDA 172
Query: 66 DVFNVLKEKWGTRLNSFISEKITFVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITK 125
++F L+E G SF+ K+ V G++ +LGL + +L +E+ E+D+++NSAA T
Sbjct: 173 ELFKCLQETHGKSYQSFMLSKLVPVVGNVCESNLGL-EPDLADEIAKEVDVIINSAANTT 231
Query: 126 FDERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAYVAGERTGLILENPL------- 178
FDERYDVA INT G HL++FAKKC KLK+F+ VSTAYV G+R G I+E P
Sbjct: 232 FDERYDVAIDINTRGPCHLMSFAKKCKKLKLFLQVSTAYVNGQRQGRIMEKPFRMGDCIA 291
Query: 179 ----------DGASGLDFDAEMKV-IDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGW 227
LD +AE+K+ +D K + ++ QK MK+LG ERAKL+GW
Sbjct: 292 RELGISNSLPHNRPALDIEAEIKLALDSKRHGFQSNSFAQK-----MKDLGLERAKLYGW 346
Query: 228 PNTYVFTKTMGEMLMQQSKENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQG 287
+TYVFTK MGEM++ + ++ +VIIRP+V+ T+K+PFPGW+E + ++ + + +G
Sbjct: 347 QDTYVFTKAMGEMVINSMRGDIPVVIIRPSVIESTWKDPFPGWMEGNRMMDPIVLYYGKG 406
Query: 288 NLRCLVGETKVIMDVIPVDMVVNAMIVAMVAH-AKQPSDANIYHVGSSLRNPVTLGLQVA 346
L + + ++DV+P DMVVNA + AM H + N+Y + SS+ NP+ +A
Sbjct: 407 QLTGFLADPNGVLDVVPADMVVNATLAAMAKHGGAAKPEINVYQIASSVVNPLVFQ-DLA 465
Query: 347 NTVFHNFFKGVYND---------------------------------------------- 360
++ ++ Y D
Sbjct: 466 RLLYEHYKSSPYMDSKGRPIHVPPMKLFSSMEDFSSHLWRDALLRSGLAGMSSSDRKLSQ 525
Query: 361 -----LRKKVKFVMRVVEIYKPYFYFNGIFDDTNTEKLRMTARGSRTETDLFYFDPDSIE 415
K V+ + IY+PY ++ G FD++NT++L R S E F FD SI+
Sbjct: 526 KLENICAKSVEQAKYLASIYEPYTFYGGRFDNSNTQRL--MERMSEEEKAEFGFDVGSID 583
Query: 416 WSDYFMNTHIPGVEKLLQQKR 436
W DY N HIPG+ + + + R
Sbjct: 584 WRDYITNVHIPGLRRHVMKGR 604
|
Length = 605 |
| >gnl|CDD|187547 cd05236, FAR-N_SDR_e, fatty acyl CoA reductases (FARs), extended (e) SDRs | Back alignment and domain information |
|---|
Score = 310 bits (796), Expect = e-102
Identities = 127/331 (38%), Positives = 186/331 (56%), Gaps = 26/331 (7%)
Query: 13 KTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLK 72
K++L++G TGF+ KV +EK+LR P++ K+YL +R SA R + + K
Sbjct: 1 KSVLITGATGFLGKVLLEKLLRSCPDIGKIYLLIRGKSGQSAEERLRELLKDKL------ 54
Query: 73 EKWGTRLNSFISEKITFVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKFDERYDV 132
G LN KI + GD+S +LGL D +L + L E++I+++ AA FDER D
Sbjct: 55 FDRGRNLNPLFESKIVPIEGDLSEPNLGLSDEDL-QTLIEEVNIIIHCAATVTFDERLDE 113
Query: 133 AFGINTLGVIHLVNFAKKCVKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKV 192
A IN LG + L+ AK+C KLK FVHVSTAYV G+R LI E D ++
Sbjct: 114 ALSINVLGTLRLLELAKRCKKLKAFVHVSTAYVNGDRQ-LIEEKVY--PPPAD-PEKLID 169
Query: 193 IDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLMQQSKENLSLV 252
I + +++L+ + A K L G PNTY FTK + E L+ + + NL LV
Sbjct: 170 ILELMDDLELERATPK--------------LLGGHPNTYTFTKALAERLVLKERGNLPLV 215
Query: 253 IIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAM 312
I+RP++V T KEPFPGW+++ + LF+A +G LR + + + D+IPVD+V NA+
Sbjct: 216 IVRPSIVGATLKEPFPGWIDNFNGPDGLFLAYGKGILRTMNADPNAVADIIPVDVVANAL 275
Query: 313 IVAMVAHA-KQPSDANIYHVGSSLRNPVTLG 342
+ A ++P + +YH GSS NP T G
Sbjct: 276 LAAAAYSGVRKPRELEVYHCGSSDVNPFTWG 306
|
SDRs are Rossmann-fold NAD(P)H-binding proteins, many of which may function as fatty acyl CoA reductases (FAR), acting on medium and long chain fatty acids, and have been reported to be involved in diverse processes such as biosynthesis of insect pheromones, plant cuticular wax production, and mammalian wax biosynthesis. In Arabidopsis thaliana, proteins with this particular architecture have also been identified as the MALE STERILITY 2 (MS2) gene product, which is implicated in male gametogenesis. Mutations in MS2 inhibit the synthesis of exine (sporopollenin), rendering plants unable to reduce pollen wall fatty acids to corresponding alcohols. This N-terminal domain shares the catalytic triad (but not the upstream Asn) and characteristic NADP-binding motif of the extended SDR family. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 320 |
| >gnl|CDD|219687 pfam07993, NAD_binding_4, Male sterility protein | Back alignment and domain information |
|---|
Score = 247 bits (633), Expect = 4e-79
Identities = 97/297 (32%), Positives = 143/297 (48%), Gaps = 53/297 (17%)
Query: 17 VSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWG 76
++G TGF+ KV +EK+LR P VK +Y VRA D +SA R + E+L +F+ LK
Sbjct: 1 LTGATGFLGKVLLEKLLRSTPEVK-IYCLVRAKDGESALERLRQELLKYGLFDRLK---- 55
Query: 77 TRLNSFISEKITFVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKFDERYDVAFGI 136
E+I V GD+S +LGL D + +EL E+D+++++AA F E Y
Sbjct: 56 ------ALERIIPVAGDLSEPNLGLSDEDF-QELAEEVDVIIHNAATVNFVEPYSDLRAT 108
Query: 137 NTLGVIHLVNFAKKCVKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQK 196
N LG ++ AK+ K F HVSTAYV GER GL+ E P
Sbjct: 109 NVLGTREVLRLAKQM-KKLPFHHVSTAYVNGERGGLLEEKP------------------- 148
Query: 197 LNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLMQQSKENLSLVIIRP 256
K E A L G PN Y +K + E L++++ L +VI RP
Sbjct: 149 -----------------YKLDEDEPALLGGLPNGYTQSKWLAEQLVREAAGGLPVVIYRP 191
Query: 257 TVVSGTYKEPFPGWVEDLKTINTLFVASAQ-GNLRCLVGETKVIMDVIPVDMVVNAM 312
++++G E GW+ + A G L ++G+ +D++PVD V NA+
Sbjct: 192 SIITG---ESRTGWINGDDFGPRGLLGGAGLGVLPDILGDPDARLDLVPVDYVANAI 245
|
This family represents the C-terminal region of the male sterility protein in a number of arabidopsis and drosophila. A sequence-related jojoba acyl CoA reductase is also included. Length = 245 |
| >gnl|CDD|187573 cd05263, MupV_like_SDR_e, Pseudomonas fluorescens MupV-like, extended (e) SDRs | Back alignment and domain information |
|---|
Score = 98.6 bits (246), Expect = 6e-23
Identities = 62/300 (20%), Positives = 117/300 (39%), Gaps = 71/300 (23%)
Query: 15 ILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEK 74
+ V+G TGF+ + ++++L N K+ + VR+ + E
Sbjct: 1 VFVTGGTGFLGRHLVKRLL---ENGFKVLVLVRSES--LGEAHERIEEA----------- 44
Query: 75 WGTRLNSFISEKITFVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKFDERYDVAF 134
++++ + GD++ +LGL + +E ++D +++ AA F + A+
Sbjct: 45 ------GLEADRVRVLEGDLTQPNLGLSAAASRELA-GKVDHVIHCAASYDFQAPNEDAW 97
Query: 135 GINTLGVIHLVNFAKKCVKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVID 194
N G H++ A + ++ F +VSTAYVAG R G I E L+
Sbjct: 98 RTNIDGTEHVLELAARL-DIQRFHYVSTAYVAGNREGNIRETELNPGQNF---------- 146
Query: 195 QKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLMQQSKENLSLVII 254
N Y +K E L++ + + L +
Sbjct: 147 ---------------------------------KNPYEQSKAEAEQLVRAAATQIPLTVY 173
Query: 255 RPTVVSGTYKEPFPGWVEDLKTINTLFVASA-QGNLRCLVGETKVIMDVIPVDMVVNAMI 313
RP++V G K G +E + + L A G + G ++++PVD V +A++
Sbjct: 174 RPSIVVGDSKT---GRIEKIDGLYELLNLLAKLGRWLPMPGNKGARLNLVPVDYVADAIV 230
|
This subgroup of extended SDR family domains have the characteristic active site tetrad and a well-conserved NAD(P)-binding motif. This subgroup is not well characterized, its members are annotated as having a variety of putative functions. One characterized member is Pseudomonas fluorescens MupV a protein involved in the biosynthesis of Mupirocin, a polyketide-derived antibiotic. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 293 |
| >gnl|CDD|187546 cd05235, SDR_e1, extended (e) SDRs, subgroup 1 | Back alignment and domain information |
|---|
Score = 90.0 bits (224), Expect = 4e-20
Identities = 52/179 (29%), Positives = 83/179 (46%), Gaps = 21/179 (11%)
Query: 14 TILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKE 73
T+L++G TGF+ + ++L+ + NV K+Y VRA D ++A R + LKE
Sbjct: 1 TVLLTGATGFLGAYLLRELLK-RKNVSKIYCLVRAKDEEAALERLID---------NLKE 50
Query: 74 KWGTRLNSFISEKITFVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKFDERYDVA 133
+ +I V GD+S +LGL D + +EL E+D+++++ A + Y+
Sbjct: 51 YGLNLWDELELSRIKVVVGDLSKPNLGLSDDD-YQELAEEVDVIIHNGANVNWVYPYEEL 109
Query: 134 FGINTLGVIHLVNFAKKCVKLKVFVHVSTAYVAG--ERTGL-------ILENPLDGASG 183
N LG L+ A KLK VST V E L +LE+ +G
Sbjct: 110 KPANVLGTKELLKLAAT-GKLKPLHFVSTLSVFSAEEYNALDDEESDDMLESQNGLPNG 167
|
This family consists of an SDR module of multidomain proteins identified as putative polyketide sythases fatty acid synthases (FAS), and nonribosomal peptide synthases, among others. However, unlike the usual ketoreductase modules of FAS and polyketide synthase, these domains are related to the extended SDRs, and have canonical NAD(P)-binding motifs and an active site tetrad. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 290 |
| >gnl|CDD|233557 TIGR01746, Thioester-redct, thioester reductase domain | Back alignment and domain information |
|---|
Score = 79.8 bits (197), Expect = 4e-16
Identities = 71/337 (21%), Positives = 126/337 (37%), Gaps = 78/337 (23%)
Query: 14 TILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKE 73
T+L++G TGF+ +E++LR K + VRAA + A R + + + +
Sbjct: 1 TVLLTGATGFLGAYLLEELLRRSTQAK-VICLVRAASEEHAMERLREALRSYRL------ 53
Query: 74 KWGTRLNSFISEKITFVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKFDERYDVA 133
W E+I V GD+S LGL D+ E L +D +V++ A+ + Y
Sbjct: 54 -WHE---DLARERIEVVAGDLSEPRLGLSDAEW-ERLAENVDTIVHNGALVNWVYPYSEL 108
Query: 134 FGINTLGVIHLVNFAKKCVKLKVFVHVSTAYV--AGERTGLILENPLDGASGLDFDAEMK 191
G N LG ++ A + K +VST V A + + + ++
Sbjct: 109 RGANVLGTREVLRLAAS-GRAKPLHYVSTISVGAAIDLSTVTEDDATVTPPP-------- 159
Query: 192 VIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLMQQSKEN-LS 250
G Y +K + E+L++++ + L
Sbjct: 160 ----------------------------------GLAGGYAQSKWVAELLVREASDRGLP 185
Query: 251 LVIIRPTVVSGTYKEPFPGWVEDLKT--INT----LFVASAQGNLRCLVGETKVIMDVIP 304
+ I+RP + G + T IN+ + L ++ D+ P
Sbjct: 186 VTIVRPGRILG-----------NSYTGAINSSDILWRMVKGCLALGAYPQSPELTEDLTP 234
Query: 305 VDMVVNAMIVAMVAHAKQPSDANIYHVGSSLRNPVTL 341
VD V A IV + + + ++HV + PV+L
Sbjct: 235 VDFVARA-IVVLSSRPAASAGGPVFHVVN--PEPVSL 268
|
This model includes the terminal domain from the fungal alpha aminoadipate reductase enzyme (also known as aminoadipate semialdehyde dehydrogenase) which is involved in the biosynthesis of lysine , as well as the reductase-containing component of the myxochelin biosynthetic gene cluster, MxcG. The mechanism of reduction involves activation of the substrate by adenylation and transfer to a covalently-linked pantetheine cofactor as a thioester. This thioester is then reduced to give an aldehyde (thus releasing the product) and a regenerated pantetheine thiol. (In myxochelin biosynthesis this aldehyde is further reduced to an alcohol or converted to an amine by an aminotransferase.) This is a fundamentally different reaction than beta-ketoreductase domains of polyketide synthases which act at a carbonyl two carbons removed from the thioester and forms an alcohol as a product. This domain is invariably found at the C-terminus of the proteins which contain it (presumably because it results in the release of the product). The majority of hits to this model are non-ribosomal peptide synthetases in which this domain is similarly located proximal to a thiolation domain (pfam00550). In some cases this domain is found at the end of a polyketide synthetase enzyme, but is unlike ketoreductase domains which are found before the thiolase domains. Exceptions to this observed relationship with the thiolase domain include three proteins which consist of stand-alone reductase domains (GP|466833 from M. leprae, GP|435954 from Anabaena and OMNI|NTL02SC1199 from Strep. coelicolor) and one protein (OMNI|NTL01NS2636 from Nostoc) which contains N-terminal homology with a small group of hypothetical proteins but no evidence of a thiolation domain next to the putative reductase domain. Below the noise cutoff to this model are proteins containing more distantly related ketoreductase and dehydratase/epimerase domains. It has been suggested that a NADP-binding motif can be found in the N-terminal portion of this domain that may form a Rossman-type fold. Length = 367 |
| >gnl|CDD|176924 cd09071, FAR_C, C-terminal domain of fatty acyl CoA reductases | Back alignment and domain information |
|---|
Score = 62.2 bits (152), Expect = 3e-12
Identities = 24/72 (33%), Positives = 39/72 (54%), Gaps = 3/72 (4%)
Query: 361 LRKKVKFVMRVVEIYKPYFYFNGIFDDTNTEKLRMTARGSRTETDLFYFDPDSIEWSDYF 420
L K + + +++++ + + FD+ NT L S + +LF FD SI+W DYF
Sbjct: 23 LLKLYRKIHKLLDLLEYFTTNEWRFDNDNTRALWERL--SEEDRELFNFDIRSIDWDDYF 80
Query: 421 MNTHIPGVEKLL 432
N +IPG+ K L
Sbjct: 81 EN-YIPGLRKYL 91
|
C-terminal domain of fatty acyl CoA reductases, a family of SDR-like proteins. SDRs or short-chain dehydrogenases/reductases are Rossmann-fold NAD(P)H-binding proteins. Many proteins in this FAR_C family may function as fatty acyl-CoA reductases (FARs), acting on medium and long chain fatty acids, and have been reported to be involved in diverse processes such as the biosynthesis of insect pheromones, plant cuticular wax production, and mammalian wax biosynthesis. In Arabidopsis thaliana, proteins with this particular architecture have also been identified as the MALE STERILITY 2 (MS2) gene product, which is implicated in male gametogenesis. Mutations in MS2 inhibit the synthesis of exine (sporopollenin), rendering plants unable to reduce pollen wall fatty acids to corresponding alcohols. The function of this C-terminal domain is unclear. Length = 92 |
| >gnl|CDD|225857 COG3320, COG3320, Putative dehydrogenase domain of multifunctional non-ribosomal peptide synthetases and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Score = 67.8 bits (166), Expect = 4e-12
Identities = 67/364 (18%), Positives = 137/364 (37%), Gaps = 76/364 (20%)
Query: 13 KTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLK 72
+ +L++G TGF+ + ++L K+ VRA ++A R + D++
Sbjct: 1 RNVLLTGATGFLGAYLLLELLDRSD--AKVICLVRAQSDEAALARLEK---TFDLYRHWD 55
Query: 73 EKWGTRLNSFISEKITFVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKFDERYDV 132
E ++++ V GD++ DLGL + +EL +D+++++AA+ Y
Sbjct: 56 ELS--------ADRVEVVAGDLAEPDLGLSERTW-QELAENVDLIIHNAALVNHVFPYSE 106
Query: 133 AFGINTLGVIHLVNFAKKCV-KLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMK 191
G N LG ++ A K K +VS+ V + +F +
Sbjct: 107 LRGANVLGTAEVLRLA--ATGKPKPLHYVSSISV------------GETEYYSNFTVDFD 152
Query: 192 VIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLMQQSKEN-LS 250
I N G Y +K + E L++++ + L
Sbjct: 153 EISPTRN------------------------VGQGLAGGYGRSKWVAEKLVREAGDRGLP 188
Query: 251 LVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVN 310
+ I RP ++G + G + + L + Q L +++ +D++PVD V
Sbjct: 189 VTIFRPGYITGDSRT---GALNTRDFLTRLVLGLLQ--LGIA-PDSEYSLDMLPVDHVAR 242
Query: 311 AMIVAMVAHAKQPSDANIYHVGSSLRNPVTLGLQVANTVFHNFFKGVYNDLRKKVKFVMR 370
A++ + Q ++A I +G+ F+ + D ++V
Sbjct: 243 AVVAP----SVQVAEA-IAALGAHSD-----------IRFNQLHMLTHPDEIGLDEYVDW 286
Query: 371 VVEI 374
++ +
Sbjct: 287 LISL 290
|
Length = 382 |
| >gnl|CDD|234212 TIGR03443, alpha_am_amid, L-aminoadipate-semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Score = 61.6 bits (150), Expect = 6e-10
Identities = 76/336 (22%), Positives = 130/336 (38%), Gaps = 66/336 (19%)
Query: 11 ENKTILVSGVTGFVAKVFIEKIL--RVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVF 68
T+ ++G TGF+ + +L R N K ++ VRA ++ R + ++
Sbjct: 970 TPITVFLTGATGFLGSFILRDLLTRRSNSNFK-VFAHVRAKSEEAGLERLRKTGTTYGIW 1028
Query: 69 NVLKEKWGTRLNSFISEKITFVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKFDE 128
E+W + +I V GD+S E GL D +L NE+D+++++ A+ +
Sbjct: 1029 ---DEEW--------ASRIEVVLGDLSKEKFGLSDEKWS-DLTNEVDVIIHNGALVHWVY 1076
Query: 129 RYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDA 188
Y N +G I+++N + K K F VS+ S LD +
Sbjct: 1077 PYSKLRDANVIGTINVLNLCAEG-KAKQFSFVSS------------------TSALDTEY 1117
Query: 189 EMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEML-MQQSKE 247
+ + D+ + G P+ + +L L Y +K + E + + K
Sbjct: 1118 YVNLSDELVQAGG-AGIPESD------DLMGSSKGLG---TGYGQSKWVAEYIIREAGKR 1167
Query: 248 NLSLVIIRPTVVSGTYKEPFPGWVEDLKTINT------LFVASAQGNLRCLVGETKVIMD 301
L I+RP V+G K NT + Q L + T V M
Sbjct: 1168 GLRGCIVRPGYVTGDSKT---------GATNTDDFLLRMLKGCIQLGLIPNINNT-VNM- 1216
Query: 302 VIPVDMVVNAMIVAMVA-HAKQPSDANIYHVGSSLR 336
+PVD V A +V A + + S+ + HV R
Sbjct: 1217 -VPVDHV--ARVVVAAALNPPKESELAVAHVTGHPR 1249
|
Members of this protein family are L-aminoadipate-semialdehyde dehydrogenase (EC 1.2.1.31), product of the LYS2 gene. It is also called alpha-aminoadipate reductase. In fungi, lysine is synthesized via aminoadipate. Currently, all members of this family are fungal. Length = 1389 |
| >gnl|CDD|235962 PRK07201, PRK07201, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 58.4 bits (142), Expect = 5e-09
Identities = 45/192 (23%), Positives = 83/192 (43%), Gaps = 44/192 (22%)
Query: 14 TILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKE 73
V+G TGF+ + + ++L + +++ VR + R + L
Sbjct: 2 RYFVTGGTGFIGRRLVSRLLDRRRE-ATVHVLVRRQSLS----RLEA----------LAA 46
Query: 74 KWGTRLNSFISEKITFVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKFDERYDVA 133
WG +++ + GD++ LGL ++++ E ++D +V+ AAI YD+
Sbjct: 47 YWGA-------DRVVPLVGDLTEPGLGLSEADIAE--LGDIDHVVHLAAI------YDLT 91
Query: 134 FG------INTLGVIHLVNFAKKCVKLKVFVHVSTAYVAGERTGLILENPLDGASGLD-- 185
N G ++V A++ ++ F HVS+ VAG+ G+ E+ D GL
Sbjct: 92 ADEEAQRAANVDGTRNVVELAER-LQAATFHHVSSIAVAGDYEGVFREDDFDEGQGLPTP 150
Query: 186 -----FDAEMKV 192
F+AE V
Sbjct: 151 YHRTKFEAEKLV 162
|
Length = 657 |
| >gnl|CDD|212494 cd08946, SDR_e, extended (e) SDRs | Back alignment and domain information |
|---|
Score = 55.0 bits (133), Expect = 1e-08
Identities = 50/225 (22%), Positives = 81/225 (36%), Gaps = 61/225 (27%)
Query: 114 LDIMVNSAAITKFDERYD---VAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAYVAGERT 170
LD++V+ AA+ +D F N +G ++L+ A+K +K FV+ S+A V G
Sbjct: 31 LDVVVHLAALVGVPASWDNPDEDFETNVVGTLNLLEAARKA-GVKRFVYASSASVYGSPE 89
Query: 171 GLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNT 230
GL P++E T P +
Sbjct: 90 GL---------------------------------PEEEETPPR-------------PLS 103
Query: 231 -YVFTKTMGEMLMQ--QSKENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQG 287
Y +K E L++ L +VI+R V G P D +N + +G
Sbjct: 104 PYGVSKLAAEHLLRSYGESYGLPVVILRLANVYG----PGQRPRLDGV-VNDFIRRALEG 158
Query: 288 NLRCLVGETKVIMDVIPVDMVVNAMIVAMVAHAKQPSDANIYHVG 332
+ G D I VD VV A++ A+ +Y++G
Sbjct: 159 KPLTVFGGGNQTRDFIHVDDVVRAILHAL---ENPLEGGGVYNIG 200
|
Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 200 |
| >gnl|CDD|111859 pfam03015, Sterile, Male sterility protein | Back alignment and domain information |
|---|
Score = 51.1 bits (123), Expect = 2e-08
Identities = 25/73 (34%), Positives = 40/73 (54%), Gaps = 6/73 (8%)
Query: 360 DLRKKVKFVMRVVEIYKPYFYFNGIFDDTNTEKLRMTARGSRTETDLFYFDPDSIEWSDY 419
L +K+ + +E+ +P+ IFD+ NT +LR S + LF FD +S++W +Y
Sbjct: 25 KLYRKIH---KGLEVLQPFSLNEWIFDNKNTRELREKM--SEEDKKLFNFDMESLDWDEY 79
Query: 420 FMNTHIPGVEKLL 432
F N I G+ K L
Sbjct: 80 FRN-AIRGIRKYL 91
|
This family represents the C-terminal region of the male sterility protein in a number of arabidopsis and drosophila. A sequence-related jojoba acyl CoA reductase is also included. Length = 94 |
| >gnl|CDD|224016 COG1091, RfbD, dTDP-4-dehydrorhamnose reductase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Score = 48.1 bits (115), Expect = 4e-06
Identities = 30/88 (34%), Positives = 44/88 (50%), Gaps = 16/88 (18%)
Query: 108 EELWNEL--DIMVNSAAITKFD---ERYDVAFGINTLGVIHLVNFAKKC-VKLKVFVHVS 161
E+ E D+++N+AA T D ++AF +N G +L A + +L VH+S
Sbjct: 43 LEVIRETRPDVVINAAAYTAVDKAESEPELAFAVNATGAENLARAAAEVGARL---VHIS 99
Query: 162 TAYV-AGERTGLILE----NPLD--GAS 182
T YV GE+ G E NPL+ G S
Sbjct: 100 TDYVFDGEKGGPYKETDTPNPLNVYGRS 127
|
Length = 281 |
| >gnl|CDD|223528 COG0451, WcaG, Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Score = 44.9 bits (106), Expect = 5e-05
Identities = 60/344 (17%), Positives = 107/344 (31%), Gaps = 99/344 (28%)
Query: 13 KTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLK 72
ILV+G GF+ +E++L +V R D L
Sbjct: 1 MRILVTGGAGFIGSHLVERLLAAGHDV---RGLDRLRDGLDPLL---------------- 41
Query: 73 EKWGTRLNSFISEKITFVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF----DE 128
+ FV D++ DL + E D +++ AA +
Sbjct: 42 ------------SGVEFVVLDLTDRDL------VDELAKGVPDAVIHLAAQSSVPDSNAS 83
Query: 129 RYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDA 188
+N G ++L+ A+ +K FV S+ V
Sbjct: 84 DPAEFLDVNVDGTLNLLEAARAA-GVKRFVFASSVSVVYG-------------------- 122
Query: 189 EMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLMQQ--SK 246
P E + L N Y +K E L++
Sbjct: 123 ------------DPPPLPIDEDLGPPRPL-----------NPYGVSKLAAEQLLRAYARL 159
Query: 247 ENLSLVIIRPTVVSGTYKEP-FPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPV 305
L +VI+RP V G +P V + + + G+ D + V
Sbjct: 160 YGLPVVILRPFNVYGPGDKPDLSSGV----VSAFIRQLLKGEPIIVIGGDGSQTRDFVYV 215
Query: 306 DMVVNAMIVAMVAHAKQPSDANIYHVGSSLRNPVTLGLQVANTV 349
D V +A+++A+ + D ++++GS +T+ ++A V
Sbjct: 216 DDVADALLLAL-----ENPDGGVFNIGSG-TAEITVR-ELAEAV 252
|
Length = 314 |
| >gnl|CDD|218026 pfam04321, RmlD_sub_bind, RmlD substrate binding domain | Back alignment and domain information |
|---|
Score = 43.8 bits (104), Expect = 1e-04
Identities = 50/228 (21%), Positives = 77/228 (33%), Gaps = 73/228 (32%)
Query: 115 DIMVNSAAITKFD--ERY-DVAFGINTLGVIHLVNFAKKCVKLKV-FVHVSTAYVAGERT 170
D++VN+AA T D E ++A+ +N LG +L A+ C +H+ST YV
Sbjct: 51 DVVVNAAAYTAVDKAESEPELAYAVNALGPGNL---AEACAARGAPLIHISTDYV----- 102
Query: 171 GLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKE--ITLFMKNLGTERAKLHGWP 228
FD KG P +E T P
Sbjct: 103 ---------------FDG-------------AKGGPYREDDPTG---------------P 119
Query: 229 -NTYVFTKTMGEMLMQQSKENLSLVIIRPTVVSGTYKEPFPGWVEDL-KTINTLFVASAQ 286
N Y TK GE + + +I+R V G Y F + L + L V Q
Sbjct: 120 LNVYGRTKLAGEQAVLAANPR--HLILRTAWVYGEYGNNFVKTMLRLAAERDELRVVDDQ 177
Query: 287 GNLRCLVGETKVIMDVIPVDMVVNAMIVAMVAHAKQPSDANIYHVGSS 334
+ + +A++ + + P+ A YH+ S
Sbjct: 178 ------------LGSPTSARDLADALLALIRKRLRGPALAGTYHLAGS 213
|
L-rhamnose is a saccharide required for the virulence of some bacteria. Its precursor, dTDP-L-rhamnose, is synthesised by four different enzymes the final one of which is RmlD. The RmlD substrate binding domain is responsible for binding a sugar nucleotide. Length = 284 |
| >gnl|CDD|187557 cd05246, dTDP_GD_SDR_e, dTDP-D-glucose 4,6-dehydratase, extended (e) SDRs | Back alignment and domain information |
|---|
Score = 43.7 bits (104), Expect = 1e-04
Identities = 41/163 (25%), Positives = 64/163 (39%), Gaps = 39/163 (23%)
Query: 13 KTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLK 72
ILV+G GF+ F+ +L P+ K + N+ K
Sbjct: 1 MKILVTGGAGFIGSNFVRYLLNKYPDYK--------------------------IINLDK 34
Query: 73 EKWGTRLNSF----ISEKITFVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKFDE 128
+ L + S + FV GDI +L + L EE ++D +++ AA + D
Sbjct: 35 LTYAGNLENLEDVSSSPRYRFVKGDICDAELVDR---LFEE--EKIDAVIHFAAESHVDR 89
Query: 129 RYDVAFG---INTLGVIHLVNFAKKCVKLKVFVHVSTAYVAGE 168
N LG L+ A+K +K FVH+ST V G+
Sbjct: 90 SISDPEPFIRTNVLGTYTLLEAARKY-GVKRFVHISTDEVYGD 131
|
This subgroup contains dTDP-D-glucose 4,6-dehydratase and related proteins, members of the extended-SDR family, with the characteristic Rossmann fold core region, active site tetrad and NAD(P)-binding motif. dTDP-D-glucose 4,6-dehydratase is closely related to other sugar epimerases of the SDR family. dTDP-D-dlucose 4,6,-dehydratase catalyzes the second of four steps in the dTDP-L-rhamnose pathway (the dehydration of dTDP-D-glucose to dTDP-4-keto-6-deoxy-D-glucose) in the synthesis of L-rhamnose, a cell wall component of some pathogenic bacteria. In many gram negative bacteria, L-rhamnose is an important constituent of lipopoylsaccharide O-antigen. The larger N-terminal portion of dTDP-D-Glucose 4,6-dehydratase forms a Rossmann fold NAD-binding domain, while the C-terminus binds the sugar substrate. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 315 |
| >gnl|CDD|223959 COG1028, FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only] | Back alignment and domain information |
|---|
Score = 43.3 bits (102), Expect = 1e-04
Identities = 40/175 (22%), Positives = 65/175 (37%), Gaps = 44/175 (25%)
Query: 10 LENKTILVSGVTG----FVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAK 65
L K LV+G + +A+ + RV V A R E A+
Sbjct: 3 LSGKVALVTGASSGIGRAIARALAREGARV----------V-------VAARRSEEEAAE 45
Query: 66 DVFNVLKEKWGTRLNSFISEKITFVPGDISSEDLGLKDSNLKEELWNE---LDIMVNSAA 122
+ +KE G + V D+S ++ ++ L E +DI+VN+A
Sbjct: 46 ALAAAIKEAGG--------GRAAAVAADVSDDEESVEA--LVAAAEEEFGRIDILVNNAG 95
Query: 123 ITKF--------DERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAYVAGER 169
I +E +D +N LG L A +K + V++S+ VAG
Sbjct: 96 IAGPDAPLEELTEEDWDRVIDVNLLGAFLLTRAALPLMKKQRIVNISS--VAGLG 148
|
Length = 251 |
| >gnl|CDD|200085 TIGR01214, rmlD, dTDP-4-dehydrorhamnose reductase | Back alignment and domain information |
|---|
Score = 42.0 bits (99), Expect = 4e-04
Identities = 26/72 (36%), Positives = 33/72 (45%), Gaps = 10/72 (13%)
Query: 115 DIMVNSAAITKFD--ERY-DVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAYV-AGERT 170
D +VN+AA T D E + AF +N L +L A + VH+ST YV GE
Sbjct: 52 DAVVNTAAYTDVDGAESDPEKAFAVNALAPQNLARAAARHG--ARLVHISTDYVFDGEGK 109
Query: 171 GLILE----NPL 178
E NPL
Sbjct: 110 RPYREDDATNPL 121
|
This enzyme catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS core antigen, O-antigen, etc [Cell envelope, Biosynthesis and degradation of surface polysaccharides and lipopolysaccharides]. Length = 287 |
| >gnl|CDD|130249 TIGR01181, dTDP_gluc_dehyt, dTDP-glucose 4,6-dehydratase | Back alignment and domain information |
|---|
Score = 40.4 bits (95), Expect = 0.001
Identities = 40/157 (25%), Positives = 60/157 (38%), Gaps = 30/157 (19%)
Query: 14 TILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKE 73
ILV+G GF+ F+ IL P+ + + L D + A +N L +
Sbjct: 1 RILVTGGAGFIGSNFVRYILNEHPDAEVIVL-----DKLTYAGNLEN----------LAD 45
Query: 74 KWGTRLNSFISEKITFVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKFDERYD-- 131
+ + FV GDI D L E ++ D +V+ AA + D
Sbjct: 46 LED-------NPRYRFVKGDIG--DRELVSRLFTE---HQPDAVVHFAAESHVDRSISGP 93
Query: 132 VAF-GINTLGVIHLVNFAKKCVKLKVFVHVSTAYVAG 167
AF N +G L+ +K F H+ST V G
Sbjct: 94 AAFIETNVVGTYTLLEAVRKYWHEFRFHHISTDEVYG 130
|
This protein is related to UDP-glucose 4-epimerase (GalE) and likewise has an NAD cofactor [Cell envelope, Biosynthesis and degradation of surface polysaccharides and lipopolysaccharides]. Length = 317 |
| >gnl|CDD|187564 cd05254, dTDP_HR_like_SDR_e, dTDP-6-deoxy-L-lyxo-4-hexulose reductase and related proteins, extended (e) SDRs | Back alignment and domain information |
|---|
Score = 40.3 bits (95), Expect = 0.002
Identities = 17/54 (31%), Positives = 30/54 (55%), Gaps = 5/54 (9%)
Query: 115 DIMVNSAAITKFDER---YDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAYV 165
D+++N AA T+ D+ ++A+ +N L +L AK+ +H+ST YV
Sbjct: 57 DVIINCAAYTRVDKCESDPELAYRVNVLAPENLARAAKEVGAR--LIHISTDYV 108
|
dTDP-6-deoxy-L-lyxo-4-hexulose reductase, an extended SDR, synthesizes dTDP-L-rhamnose from alpha-D-glucose-1-phosphate, providing the precursor of L-rhamnose, an essential cell wall component of many pathogenic bacteria. This subgroup has the characteristic active site tetrad and NADP-binding motif. This subgroup also contains human MAT2B, the regulatory subunit of methionine adenosyltransferase (MAT); MAT catalyzes S-adenosylmethionine synthesis. The human gene encoding MAT2B encodes two major splicing variants which are induced in human cell liver cancer and regulate HuR, an mRNA-binding protein which stabilizes the mRNA of several cyclins, to affect cell proliferation. Both MAT2B variants include this extended SDR domain. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 280 |
| >gnl|CDD|236399 PRK09186, PRK09186, flagellin modification protein A; Provisional | Back alignment and domain information |
|---|
Score = 38.8 bits (91), Expect = 0.004
Identities = 31/113 (27%), Positives = 49/113 (43%), Gaps = 22/113 (19%)
Query: 9 FLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVF 68
L+ KTIL++G G + ++ IL V AADID AL E L K+
Sbjct: 1 MLKGKTILITGAGGLIGSALVKAILEAGGIVI-------AADIDKEALNELLESLGKE-- 51
Query: 69 NVLKEKWGTRLNSFISEKITFVPGDISSEDLGLKDSNLKEELWNELDIMVNSA 121
F S+K++ V DI+ ++ + + E + ++D VN A
Sbjct: 52 -------------FKSKKLSLVELDITDQESLEEFLSKSAEKYGKIDGAVNCA 91
|
Length = 256 |
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 519 | |||
| KOG1221 | 467 | consensus Acyl-CoA reductase [Lipid transport and | 100.0 | |
| PLN02503 | 605 | fatty acyl-CoA reductase 2 | 100.0 | |
| PLN02996 | 491 | fatty acyl-CoA reductase | 100.0 | |
| PF07993 | 249 | NAD_binding_4: Male sterility protein; InterPro: I | 100.0 | |
| COG3320 | 382 | Putative dehydrogenase domain of multifunctional n | 100.0 | |
| COG1088 | 340 | RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope | 100.0 | |
| PRK15181 | 348 | Vi polysaccharide biosynthesis protein TviC; Provi | 100.0 | |
| PF01073 | 280 | 3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/iso | 99.98 | |
| COG1087 | 329 | GalE UDP-glucose 4-epimerase [Cell envelope biogen | 99.97 | |
| KOG1502 | 327 | consensus Flavonol reductase/cinnamoyl-CoA reducta | 99.97 | |
| PLN02427 | 386 | UDP-apiose/xylose synthase | 99.97 | |
| PLN02572 | 442 | UDP-sulfoquinovose synthase | 99.96 | |
| PLN02260 | 668 | probable rhamnose biosynthetic enzyme | 99.96 | |
| PRK07201 | 657 | short chain dehydrogenase; Provisional | 99.96 | |
| PLN02166 | 436 | dTDP-glucose 4,6-dehydratase | 99.96 | |
| PRK11908 | 347 | NAD-dependent epimerase/dehydratase family protein | 99.96 | |
| PRK10217 | 355 | dTDP-glucose 4,6-dehydratase; Provisional | 99.96 | |
| PLN02206 | 442 | UDP-glucuronate decarboxylase | 99.96 | |
| PLN02986 | 322 | cinnamyl-alcohol dehydrogenase family protein | 99.96 | |
| PRK08125 | 660 | bifunctional UDP-glucuronic acid decarboxylase/UDP | 99.96 | |
| TIGR01746 | 367 | Thioester-redct thioester reductase domain. It has | 99.96 | |
| PLN00198 | 338 | anthocyanidin reductase; Provisional | 99.96 | |
| PLN02695 | 370 | GDP-D-mannose-3',5'-epimerase | 99.96 | |
| PLN02214 | 342 | cinnamoyl-CoA reductase | 99.96 | |
| PF01370 | 236 | Epimerase: NAD dependent epimerase/dehydratase fam | 99.96 | |
| PLN02662 | 322 | cinnamyl-alcohol dehydrogenase family protein | 99.96 | |
| TIGR02622 | 349 | CDP_4_6_dhtase CDP-glucose 4,6-dehydratase. Member | 99.96 | |
| PLN02989 | 325 | cinnamyl-alcohol dehydrogenase family protein | 99.96 | |
| KOG0747 | 331 | consensus Putative NAD+-dependent epimerases [Carb | 99.95 | |
| PRK10084 | 352 | dTDP-glucose 4,6 dehydratase; Provisional | 99.95 | |
| TIGR01472 | 343 | gmd GDP-mannose 4,6-dehydratase. Excluded from thi | 99.95 | |
| PRK11150 | 308 | rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Pro | 99.95 | |
| PLN02650 | 351 | dihydroflavonol-4-reductase | 99.95 | |
| TIGR01181 | 317 | dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase. This | 99.95 | |
| PRK09987 | 299 | dTDP-4-dehydrorhamnose reductase; Provisional | 99.95 | |
| PLN02240 | 352 | UDP-glucose 4-epimerase | 99.95 | |
| COG0451 | 314 | WcaG Nucleoside-diphosphate-sugar epimerases [Cell | 99.95 | |
| PLN02653 | 340 | GDP-mannose 4,6-dehydratase | 99.94 | |
| KOG1430 | 361 | consensus C-3 sterol dehydrogenase/3-beta-hydroxys | 99.94 | |
| TIGR02197 | 314 | heptose_epim ADP-L-glycero-D-manno-heptose-6-epime | 99.94 | |
| PLN02725 | 306 | GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductas | 99.94 | |
| PLN02686 | 367 | cinnamoyl-CoA reductase | 99.94 | |
| TIGR03443 | 1389 | alpha_am_amid L-aminoadipate-semialdehyde dehydrog | 99.94 | |
| PLN02896 | 353 | cinnamyl-alcohol dehydrogenase | 99.94 | |
| PLN02583 | 297 | cinnamoyl-CoA reductase | 99.94 | |
| KOG1429 | 350 | consensus dTDP-glucose 4-6-dehydratase/UDP-glucuro | 99.93 | |
| TIGR03589 | 324 | PseB UDP-N-acetylglucosamine 4,6-dehydratase. This | 99.93 | |
| PRK10675 | 338 | UDP-galactose-4-epimerase; Provisional | 99.93 | |
| TIGR01214 | 287 | rmlD dTDP-4-dehydrorhamnose reductase. This enzyme | 99.93 | |
| COG1086 | 588 | Predicted nucleoside-diphosphate sugar epimerases | 99.92 | |
| TIGR03466 | 328 | HpnA hopanoid-associated sugar epimerase. The sequ | 99.92 | |
| TIGR01179 | 328 | galE UDP-glucose-4-epimerase. This enzyme intercon | 99.92 | |
| CHL00194 | 317 | ycf39 Ycf39; Provisional | 99.91 | |
| PF04321 | 286 | RmlD_sub_bind: RmlD substrate binding domain; Inte | 99.91 | |
| PF02719 | 293 | Polysacc_synt_2: Polysaccharide biosynthesis prote | 99.91 | |
| KOG1371 | 343 | consensus UDP-glucose 4-epimerase/UDP-sulfoquinovo | 99.91 | |
| PLN02778 | 298 | 3,5-epimerase/4-reductase | 99.9 | |
| PLN02657 | 390 | 3,8-divinyl protochlorophyllide a 8-vinyl reductas | 99.89 | |
| TIGR01777 | 292 | yfcH conserved hypothetical protein TIGR01777. Thi | 99.89 | |
| COG1091 | 281 | RfbD dTDP-4-dehydrorhamnose reductase [Cell envelo | 99.89 | |
| PLN00016 | 378 | RNA-binding protein; Provisional | 99.88 | |
| PRK05865 | 854 | hypothetical protein; Provisional | 99.84 | |
| COG1090 | 297 | Predicted nucleoside-diphosphate sugar epimerase [ | 99.82 | |
| PF13460 | 183 | NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X | 99.82 | |
| PRK12320 | 699 | hypothetical protein; Provisional | 99.81 | |
| PRK06482 | 276 | short chain dehydrogenase; Provisional | 99.79 | |
| PRK13394 | 262 | 3-hydroxybutyrate dehydrogenase; Provisional | 99.79 | |
| PLN02260 | 668 | probable rhamnose biosynthetic enzyme | 99.79 | |
| PLN00141 | 251 | Tic62-NAD(P)-related group II protein; Provisional | 99.78 | |
| PRK09135 | 249 | pteridine reductase; Provisional | 99.78 | |
| TIGR01963 | 255 | PHB_DH 3-hydroxybutyrate dehydrogenase. This model | 99.77 | |
| PRK12826 | 251 | 3-ketoacyl-(acyl-carrier-protein) reductase; Revie | 99.77 | |
| PRK06914 | 280 | short chain dehydrogenase; Provisional | 99.77 | |
| PF03015 | 94 | Sterile: Male sterility protein; InterPro: IPR0042 | 99.76 | |
| PRK12429 | 258 | 3-hydroxybutyrate dehydrogenase; Provisional | 99.76 | |
| PRK07067 | 257 | sorbitol dehydrogenase; Provisional | 99.75 | |
| PRK12746 | 254 | short chain dehydrogenase; Provisional | 99.75 | |
| PRK12825 | 249 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.75 | |
| PLN03209 | 576 | translocon at the inner envelope of chloroplast su | 99.75 | |
| PRK07774 | 250 | short chain dehydrogenase; Provisional | 99.74 | |
| PRK06182 | 273 | short chain dehydrogenase; Validated | 99.74 | |
| COG1089 | 345 | Gmd GDP-D-mannose dehydratase [Cell envelope bioge | 99.73 | |
| PRK12935 | 247 | acetoacetyl-CoA reductase; Provisional | 99.73 | |
| PRK07806 | 248 | short chain dehydrogenase; Provisional | 99.73 | |
| PRK07523 | 255 | gluconate 5-dehydrogenase; Provisional | 99.73 | |
| PRK08263 | 275 | short chain dehydrogenase; Provisional | 99.73 | |
| PRK12823 | 260 | benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylat | 99.73 | |
| PRK12829 | 264 | short chain dehydrogenase; Provisional | 99.73 | |
| KOG2865 | 391 | consensus NADH:ubiquinone oxidoreductase, NDUFA9/3 | 99.72 | |
| PRK12745 | 256 | 3-ketoacyl-(acyl-carrier-protein) reductase; Provi | 99.72 | |
| PRK06180 | 277 | short chain dehydrogenase; Provisional | 99.72 | |
| TIGR03649 | 285 | ergot_EASG ergot alkaloid biosynthesis protein, AF | 99.72 | |
| PRK08063 | 250 | enoyl-(acyl carrier protein) reductase; Provisiona | 99.72 | |
| PRK05876 | 275 | short chain dehydrogenase; Provisional | 99.72 | |
| PRK07775 | 274 | short chain dehydrogenase; Provisional | 99.72 | |
| PRK06138 | 252 | short chain dehydrogenase; Provisional | 99.71 | |
| KOG1431 | 315 | consensus GDP-L-fucose synthetase [Carbohydrate tr | 99.71 | |
| PRK06077 | 252 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.71 | |
| PRK07890 | 258 | short chain dehydrogenase; Provisional | 99.71 | |
| PRK05875 | 276 | short chain dehydrogenase; Provisional | 99.71 | |
| PRK06128 | 300 | oxidoreductase; Provisional | 99.71 | |
| PRK08628 | 258 | short chain dehydrogenase; Provisional | 99.71 | |
| TIGR03206 | 250 | benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydr | 99.71 | |
| PRK05717 | 255 | oxidoreductase; Validated | 99.71 | |
| PRK05653 | 246 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.7 | |
| PRK12828 | 239 | short chain dehydrogenase; Provisional | 99.7 | |
| PRK06179 | 270 | short chain dehydrogenase; Provisional | 99.7 | |
| PRK12827 | 249 | short chain dehydrogenase; Provisional | 99.69 | |
| PRK12384 | 259 | sorbitol-6-phosphate dehydrogenase; Provisional | 99.69 | |
| PRK09186 | 256 | flagellin modification protein A; Provisional | 99.69 | |
| PRK05993 | 277 | short chain dehydrogenase; Provisional | 99.69 | |
| PRK06194 | 287 | hypothetical protein; Provisional | 99.68 | |
| PRK05557 | 248 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.68 | |
| PRK07074 | 257 | short chain dehydrogenase; Provisional | 99.68 | |
| PRK07060 | 245 | short chain dehydrogenase; Provisional | 99.68 | |
| PRK07231 | 251 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.67 | |
| PRK06123 | 248 | short chain dehydrogenase; Provisional | 99.67 | |
| PRK06701 | 290 | short chain dehydrogenase; Provisional | 99.67 | |
| PRK08219 | 227 | short chain dehydrogenase; Provisional | 99.67 | |
| PRK06500 | 249 | short chain dehydrogenase; Provisional | 99.67 | |
| PRK08213 | 259 | gluconate 5-dehydrogenase; Provisional | 99.66 | |
| TIGR01832 | 248 | kduD 2-deoxy-D-gluconate 3-dehydrogenase. This mod | 99.66 | |
| PRK12939 | 250 | short chain dehydrogenase; Provisional | 99.66 | |
| PRK06841 | 255 | short chain dehydrogenase; Provisional | 99.65 | |
| PRK06523 | 260 | short chain dehydrogenase; Provisional | 99.65 | |
| PRK06181 | 263 | short chain dehydrogenase; Provisional | 99.65 | |
| PLN02253 | 280 | xanthoxin dehydrogenase | 99.65 | |
| PRK07666 | 239 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.65 | |
| PRK09134 | 258 | short chain dehydrogenase; Provisional | 99.65 | |
| PRK08264 | 238 | short chain dehydrogenase; Validated | 99.64 | |
| PRK08220 | 252 | 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated | 99.64 | |
| PRK06398 | 258 | aldose dehydrogenase; Validated | 99.64 | |
| PRK12937 | 245 | short chain dehydrogenase; Provisional | 99.64 | |
| PRK12936 | 245 | 3-ketoacyl-(acyl-carrier-protein) reductase NodG; | 99.64 | |
| PRK08324 | 681 | short chain dehydrogenase; Validated | 99.64 | |
| PRK06935 | 258 | 2-deoxy-D-gluconate 3-dehydrogenase; Provisional | 99.63 | |
| PRK07825 | 273 | short chain dehydrogenase; Provisional | 99.63 | |
| PRK07985 | 294 | oxidoreductase; Provisional | 99.63 | |
| PRK07814 | 263 | short chain dehydrogenase; Provisional | 99.63 | |
| PRK06463 | 255 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.63 | |
| PRK09730 | 247 | putative NAD(P)-binding oxidoreductase; Provisiona | 99.63 | |
| PRK10538 | 248 | malonic semialdehyde reductase; Provisional | 99.63 | |
| PRK07024 | 257 | short chain dehydrogenase; Provisional | 99.63 | |
| cd09071 | 92 | FAR_C C-terminal domain of fatty acyl CoA reductas | 99.63 | |
| PRK07454 | 241 | short chain dehydrogenase; Provisional | 99.62 | |
| PRK12744 | 257 | short chain dehydrogenase; Provisional | 99.62 | |
| PRK12747 | 252 | short chain dehydrogenase; Provisional | 99.62 | |
| PRK08226 | 263 | short chain dehydrogenase; Provisional | 99.62 | |
| TIGR01830 | 239 | 3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) re | 99.62 | |
| PRK07577 | 234 | short chain dehydrogenase; Provisional | 99.62 | |
| PRK12742 | 237 | oxidoreductase; Provisional | 99.62 | |
| PRK05693 | 274 | short chain dehydrogenase; Provisional | 99.62 | |
| PRK08085 | 254 | gluconate 5-dehydrogenase; Provisional | 99.61 | |
| PRK07326 | 237 | short chain dehydrogenase; Provisional | 99.61 | |
| PRK05867 | 253 | short chain dehydrogenase; Provisional | 99.61 | |
| PRK09291 | 257 | short chain dehydrogenase; Provisional | 99.61 | |
| PRK05866 | 293 | short chain dehydrogenase; Provisional | 99.61 | |
| PRK07109 | 334 | short chain dehydrogenase; Provisional | 99.61 | |
| PRK06114 | 254 | short chain dehydrogenase; Provisional | 99.61 | |
| PRK06113 | 255 | 7-alpha-hydroxysteroid dehydrogenase; Validated | 99.61 | |
| PRK06101 | 240 | short chain dehydrogenase; Provisional | 99.61 | |
| PRK08589 | 272 | short chain dehydrogenase; Validated | 99.61 | |
| PRK12938 | 246 | acetyacetyl-CoA reductase; Provisional | 99.6 | |
| PRK08251 | 248 | short chain dehydrogenase; Provisional | 99.6 | |
| PRK06196 | 315 | oxidoreductase; Provisional | 99.6 | |
| PRK05650 | 270 | short chain dehydrogenase; Provisional | 99.6 | |
| PRK07856 | 252 | short chain dehydrogenase; Provisional | 99.6 | |
| PRK08017 | 256 | oxidoreductase; Provisional | 99.6 | |
| PRK05565 | 247 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.6 | |
| PRK12748 | 256 | 3-ketoacyl-(acyl-carrier-protein) reductase; Provi | 99.6 | |
| PRK12824 | 245 | acetoacetyl-CoA reductase; Provisional | 99.6 | |
| PRK08642 | 253 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.6 | |
| PRK07478 | 254 | short chain dehydrogenase; Provisional | 99.59 | |
| PRK06124 | 256 | gluconate 5-dehydrogenase; Provisional | 99.59 | |
| PRK08217 | 253 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.58 | |
| PRK07453 | 322 | protochlorophyllide oxidoreductase; Validated | 99.58 | |
| PRK06550 | 235 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.58 | |
| PRK06139 | 330 | short chain dehydrogenase; Provisional | 99.58 | |
| PRK12743 | 256 | oxidoreductase; Provisional | 99.58 | |
| PRK07102 | 243 | short chain dehydrogenase; Provisional | 99.58 | |
| PRK08265 | 261 | short chain dehydrogenase; Provisional | 99.58 | |
| PRK06198 | 260 | short chain dehydrogenase; Provisional | 99.58 | |
| PRK06057 | 255 | short chain dehydrogenase; Provisional | 99.57 | |
| PRK08277 | 278 | D-mannonate oxidoreductase; Provisional | 99.57 | |
| PRK05786 | 238 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.57 | |
| PRK07063 | 260 | short chain dehydrogenase; Provisional | 99.57 | |
| PRK09242 | 257 | tropinone reductase; Provisional | 99.57 | |
| PRK07035 | 252 | short chain dehydrogenase; Provisional | 99.57 | |
| PRK06947 | 248 | glucose-1-dehydrogenase; Provisional | 99.57 | |
| PRK06172 | 253 | short chain dehydrogenase; Provisional | 99.55 | |
| COG4221 | 246 | Short-chain alcohol dehydrogenase of unknown speci | 99.55 | |
| PRK06197 | 306 | short chain dehydrogenase; Provisional | 99.55 | |
| PRK08278 | 273 | short chain dehydrogenase; Provisional | 99.55 | |
| PRK07576 | 264 | short chain dehydrogenase; Provisional | 99.55 | |
| PRK07792 | 306 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.55 | |
| TIGR01829 | 242 | AcAcCoA_reduct acetoacetyl-CoA reductase. (R)-3-hy | 99.55 | |
| PRK08945 | 247 | putative oxoacyl-(acyl carrier protein) reductase; | 99.55 | |
| PRK06949 | 258 | short chain dehydrogenase; Provisional | 99.55 | |
| PRK07041 | 230 | short chain dehydrogenase; Provisional | 99.55 | |
| PRK08267 | 260 | short chain dehydrogenase; Provisional | 99.54 | |
| PRK07097 | 265 | gluconate 5-dehydrogenase; Provisional | 99.54 | |
| PRK08643 | 256 | acetoin reductase; Validated | 99.54 | |
| TIGR02415 | 254 | 23BDH acetoin reductases. One member of this famil | 99.54 | |
| PRK07904 | 253 | short chain dehydrogenase; Provisional | 99.54 | |
| PRK09072 | 263 | short chain dehydrogenase; Provisional | 99.54 | |
| PRK08416 | 260 | 7-alpha-hydroxysteroid dehydrogenase; Provisional | 99.53 | |
| PRK05872 | 296 | short chain dehydrogenase; Provisional | 99.53 | |
| TIGR03325 | 262 | BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydro | 99.52 | |
| PRK07832 | 272 | short chain dehydrogenase; Provisional | 99.52 | |
| PRK08993 | 253 | 2-deoxy-D-gluconate 3-dehydrogenase; Validated | 99.52 | |
| PRK08339 | 263 | short chain dehydrogenase; Provisional | 99.52 | |
| PRK07069 | 251 | short chain dehydrogenase; Validated | 99.52 | |
| PRK06171 | 266 | sorbitol-6-phosphate 2-dehydrogenase; Provisional | 99.51 | |
| PRK12481 | 251 | 2-deoxy-D-gluconate 3-dehydrogenase; Provisional | 99.51 | |
| TIGR02632 | 676 | RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alc | 99.51 | |
| PRK07201 | 657 | short chain dehydrogenase; Provisional | 99.51 | |
| PRK08703 | 239 | short chain dehydrogenase; Provisional | 99.5 | |
| PRK06200 | 263 | 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrog | 99.5 | |
| KOG1205 | 282 | consensus Predicted dehydrogenase [Secondary metab | 99.49 | |
| COG0300 | 265 | DltE Short-chain dehydrogenases of various substra | 99.49 | |
| PF05368 | 233 | NmrA: NmrA-like family; InterPro: IPR008030 NmrA i | 99.49 | |
| TIGR01831 | 239 | fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductas | 99.49 | |
| PRK07677 | 252 | short chain dehydrogenase; Provisional | 99.49 | |
| PRK06079 | 252 | enoyl-(acyl carrier protein) reductase; Provisiona | 99.48 | |
| PRK07791 | 286 | short chain dehydrogenase; Provisional | 99.47 | |
| PRK12859 | 256 | 3-ketoacyl-(acyl-carrier-protein) reductase; Provi | 99.47 | |
| PRK08936 | 261 | glucose-1-dehydrogenase; Provisional | 99.47 | |
| PRK06484 | 520 | short chain dehydrogenase; Validated | 99.47 | |
| PRK06953 | 222 | short chain dehydrogenase; Provisional | 99.46 | |
| PRK07062 | 265 | short chain dehydrogenase; Provisional | 99.46 | |
| PRK07578 | 199 | short chain dehydrogenase; Provisional | 99.46 | |
| PRK08159 | 272 | enoyl-(acyl carrier protein) reductase; Provisiona | 99.46 | |
| PRK07023 | 243 | short chain dehydrogenase; Provisional | 99.46 | |
| PRK05854 | 313 | short chain dehydrogenase; Provisional | 99.45 | |
| PRK07831 | 262 | short chain dehydrogenase; Provisional | 99.45 | |
| PRK09009 | 235 | C factor cell-cell signaling protein; Provisional | 99.45 | |
| PRK07533 | 258 | enoyl-(acyl carrier protein) reductase; Provisiona | 99.45 | |
| PRK08415 | 274 | enoyl-(acyl carrier protein) reductase; Provisiona | 99.45 | |
| PRK06483 | 236 | dihydromonapterin reductase; Provisional | 99.44 | |
| smart00822 | 180 | PKS_KR This enzymatic domain is part of bacterial | 99.44 | |
| PRK07370 | 258 | enoyl-(acyl carrier protein) reductase; Validated | 99.44 | |
| PRK08594 | 257 | enoyl-(acyl carrier protein) reductase; Provisiona | 99.43 | |
| PRK07424 | 406 | bifunctional sterol desaturase/short chain dehydro | 99.43 | |
| PRK06125 | 259 | short chain dehydrogenase; Provisional | 99.42 | |
| PRK08690 | 261 | enoyl-(acyl carrier protein) reductase; Provisiona | 99.42 | |
| PRK06997 | 260 | enoyl-(acyl carrier protein) reductase; Provisiona | 99.42 | |
| PLN02780 | 320 | ketoreductase/ oxidoreductase | 99.42 | |
| PRK05855 | 582 | short chain dehydrogenase; Validated | 99.42 | |
| PRK08261 | 450 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.42 | |
| TIGR02685 | 267 | pter_reduc_Leis pteridine reductase. Pteridine red | 99.41 | |
| PRK08177 | 225 | short chain dehydrogenase; Provisional | 99.41 | |
| PRK12367 | 245 | short chain dehydrogenase; Provisional | 99.39 | |
| PRK06603 | 260 | enoyl-(acyl carrier protein) reductase; Provisiona | 99.39 | |
| PRK06505 | 271 | enoyl-(acyl carrier protein) reductase; Provisiona | 99.38 | |
| PRK07889 | 256 | enoyl-(acyl carrier protein) reductase; Provisiona | 99.37 | |
| PRK06924 | 251 | short chain dehydrogenase; Provisional | 99.37 | |
| PRK07984 | 262 | enoyl-(acyl carrier protein) reductase; Provisiona | 99.37 | |
| PRK05884 | 223 | short chain dehydrogenase; Provisional | 99.35 | |
| COG0702 | 275 | Predicted nucleoside-diphosphate-sugar epimerases | 99.35 | |
| PRK08340 | 259 | glucose-1-dehydrogenase; Provisional | 99.34 | |
| PRK06940 | 275 | short chain dehydrogenase; Provisional | 99.34 | |
| KOG1372 | 376 | consensus GDP-mannose 4,6 dehydratase [Carbohydrat | 99.33 | |
| PRK05599 | 246 | hypothetical protein; Provisional | 99.33 | |
| PF00106 | 167 | adh_short: short chain dehydrogenase alcohol dehyd | 99.31 | |
| KOG2774 | 366 | consensus NAD dependent epimerase [General functio | 99.3 | |
| PRK06484 | 520 | short chain dehydrogenase; Validated | 99.3 | |
| PRK08303 | 305 | short chain dehydrogenase; Provisional | 99.29 | |
| TIGR01289 | 314 | LPOR light-dependent protochlorophyllide reductase | 99.27 | |
| KOG1201 | 300 | consensus Hydroxysteroid 17-beta dehydrogenase 11 | 99.26 | |
| TIGR01500 | 256 | sepiapter_red sepiapterin reductase. This model de | 99.25 | |
| KOG1208 | 314 | consensus Dehydrogenases with different specificit | 99.2 | |
| PRK08862 | 227 | short chain dehydrogenase; Provisional | 99.19 | |
| KOG4039 | 238 | consensus Serine/threonine kinase TIP30/CC3 [Signa | 99.18 | |
| KOG0725 | 270 | consensus Reductases with broad range of substrate | 99.14 | |
| KOG1207 | 245 | consensus Diacetyl reductase/L-xylulose reductase | 99.11 | |
| PLN00015 | 308 | protochlorophyllide reductase | 99.11 | |
| COG1028 | 251 | FabG Dehydrogenases with different specificities ( | 99.09 | |
| PLN02730 | 303 | enoyl-[acyl-carrier-protein] reductase | 99.05 | |
| KOG4288 | 283 | consensus Predicted oxidoreductase [General functi | 99.03 | |
| KOG1203 | 411 | consensus Predicted dehydrogenase [Carbohydrate tr | 99.02 | |
| PF08659 | 181 | KR: KR domain; InterPro: IPR013968 This domain is | 99.02 | |
| KOG1200 | 256 | consensus Mitochondrial/plastidial beta-ketoacyl-A | 99.02 | |
| COG3967 | 245 | DltE Short-chain dehydrogenase involved in D-alani | 98.98 | |
| KOG1610 | 322 | consensus Corticosteroid 11-beta-dehydrogenase and | 98.98 | |
| PF13561 | 241 | adh_short_C2: Enoyl-(Acyl carrier protein) reducta | 98.95 | |
| KOG4169 | 261 | consensus 15-hydroxyprostaglandin dehydrogenase an | 98.87 | |
| KOG1209 | 289 | consensus 1-Acyl dihydroxyacetone phosphate reduct | 98.84 | |
| PRK06300 | 299 | enoyl-(acyl carrier protein) reductase; Provisiona | 98.82 | |
| TIGR02813 | 2582 | omega_3_PfaA polyketide-type polyunsaturated fatty | 98.82 | |
| PRK12428 | 241 | 3-alpha-hydroxysteroid dehydrogenase; Provisional | 98.81 | |
| KOG1611 | 249 | consensus Predicted short chain-type dehydrogenase | 98.77 | |
| KOG1210 | 331 | consensus Predicted 3-ketosphinganine reductase [S | 98.68 | |
| COG2910 | 211 | Putative NADH-flavin reductase [General function p | 98.64 | |
| PRK06720 | 169 | hypothetical protein; Provisional | 98.49 | |
| KOG1014 | 312 | consensus 17 beta-hydroxysteroid dehydrogenase typ | 98.43 | |
| KOG1204 | 253 | consensus Predicted dehydrogenase [Secondary metab | 98.29 | |
| KOG3019 | 315 | consensus Predicted nucleoside-diphosphate sugar e | 98.28 | |
| PRK08309 | 177 | short chain dehydrogenase; Provisional | 98.23 | |
| PLN00106 | 323 | malate dehydrogenase | 98.18 | |
| PRK09620 | 229 | hypothetical protein; Provisional | 98.17 | |
| KOG1199 | 260 | consensus Short-chain alcohol dehydrogenase/3-hydr | 98.08 | |
| PTZ00325 | 321 | malate dehydrogenase; Provisional | 98.03 | |
| cd01336 | 325 | MDH_cytoplasmic_cytosolic Cytoplasmic and cytosoli | 98.01 | |
| PRK13656 | 398 | trans-2-enoyl-CoA reductase; Provisional | 97.96 | |
| KOG1478 | 341 | consensus 3-keto sterol reductase [Lipid transport | 97.95 | |
| PRK06732 | 229 | phosphopantothenate--cysteine ligase; Validated | 97.88 | |
| PRK14982 | 340 | acyl-ACP reductase; Provisional | 97.74 | |
| PRK05086 | 312 | malate dehydrogenase; Provisional | 97.53 | |
| PRK05579 | 399 | bifunctional phosphopantothenoylcysteine decarboxy | 97.46 | |
| COG1748 | 389 | LYS9 Saccharopine dehydrogenase and related protei | 97.43 | |
| COG0623 | 259 | FabI Enoyl-[acyl-carrier-protein] | 97.37 | |
| cd01078 | 194 | NAD_bind_H4MPT_DH NADP binding domain of methylene | 97.29 | |
| cd00704 | 323 | MDH Malate dehydrogenase. Malate dehydrogenase (MD | 97.23 | |
| cd01338 | 322 | MDH_choloroplast_like Chloroplast-like malate dehy | 97.19 | |
| TIGR01758 | 324 | MDH_euk_cyt malate dehydrogenase, NAD-dependent. T | 97.06 | |
| PF01118 | 121 | Semialdhyde_dh: Semialdehyde dehydrogenase, NAD bi | 97.02 | |
| PF04127 | 185 | DFP: DNA / pantothenate metabolism flavoprotein; I | 97.01 | |
| PRK12548 | 289 | shikimate 5-dehydrogenase; Provisional | 97.01 | |
| TIGR00715 | 256 | precor6x_red precorrin-6x reductase. This enzyme w | 96.99 | |
| PF03435 | 386 | Saccharop_dh: Saccharopine dehydrogenase ; InterPr | 96.8 | |
| TIGR00521 | 390 | coaBC_dfp phosphopantothenoylcysteine decarboxylas | 96.62 | |
| PF00056 | 141 | Ldh_1_N: lactate/malate dehydrogenase, NAD binding | 96.49 | |
| KOG2733 | 423 | consensus Uncharacterized membrane protein [Functi | 96.48 | |
| TIGR02114 | 227 | coaB_strep phosphopantothenate--cysteine ligase, s | 96.37 | |
| PRK07688 | 339 | thiamine/molybdopterin biosynthesis ThiF/MoeB-like | 96.14 | |
| PRK14874 | 334 | aspartate-semialdehyde dehydrogenase; Provisional | 96.09 | |
| cd05294 | 309 | LDH-like_MDH_nadp A lactate dehydrogenases-like st | 96.01 | |
| PRK12475 | 338 | thiamine/molybdopterin biosynthesis MoeB-like prot | 96.0 | |
| cd01485 | 198 | E1-1_like Ubiquitin activating enzyme (E1), repeat | 95.94 | |
| PRK05690 | 245 | molybdopterin biosynthesis protein MoeB; Provision | 95.92 | |
| KOG1202 | 2376 | consensus Animal-type fatty acid synthase and rela | 95.92 | |
| PRK14106 | 450 | murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn | 95.86 | |
| PLN02968 | 381 | Probable N-acetyl-gamma-glutamyl-phosphate reducta | 95.79 | |
| TIGR01759 | 323 | MalateDH-SF1 malate dehydrogenase. This model repr | 95.41 | |
| PF00899 | 135 | ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-a | 95.33 | |
| PF01488 | 135 | Shikimate_DH: Shikimate / quinate 5-dehydrogenase; | 95.28 | |
| TIGR02355 | 240 | moeB molybdopterin synthase sulfurylase MoeB. This | 95.2 | |
| COG3268 | 382 | Uncharacterized conserved protein [Function unknow | 95.17 | |
| TIGR02356 | 202 | adenyl_thiF thiazole biosynthesis adenylyltransfer | 95.13 | |
| cd00757 | 228 | ThiF_MoeB_HesA_family ThiF_MoeB_HesA. Family of E1 | 95.12 | |
| PRK05597 | 355 | molybdopterin biosynthesis protein MoeB; Validated | 95.01 | |
| TIGR01296 | 339 | asd_B aspartate-semialdehyde dehydrogenase (peptid | 94.84 | |
| TIGR01850 | 346 | argC N-acetyl-gamma-glutamyl-phosphate reductase, | 94.81 | |
| PRK15116 | 268 | sulfur acceptor protein CsdL; Provisional | 94.71 | |
| PRK00066 | 315 | ldh L-lactate dehydrogenase; Reviewed | 94.65 | |
| cd00755 | 231 | YgdL_like Family of activating enzymes (E1) of ubi | 94.63 | |
| PRK05442 | 326 | malate dehydrogenase; Provisional | 94.61 | |
| PLN02383 | 344 | aspartate semialdehyde dehydrogenase | 94.59 | |
| cd01337 | 310 | MDH_glyoxysomal_mitochondrial Glyoxysomal and mito | 94.55 | |
| PRK08762 | 376 | molybdopterin biosynthesis protein MoeB; Validated | 94.49 | |
| PRK02472 | 447 | murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn | 94.45 | |
| PRK08328 | 231 | hypothetical protein; Provisional | 94.44 | |
| cd01492 | 197 | Aos1_SUMO Ubiquitin activating enzyme (E1) subunit | 94.29 | |
| PRK05671 | 336 | aspartate-semialdehyde dehydrogenase; Reviewed | 94.13 | |
| PRK07878 | 392 | molybdopterin biosynthesis-like protein MoeZ; Vali | 94.06 | |
| PLN02819 | 1042 | lysine-ketoglutarate reductase/saccharopine dehydr | 94.01 | |
| PRK08644 | 212 | thiamine biosynthesis protein ThiF; Provisional | 93.96 | |
| PRK08223 | 287 | hypothetical protein; Validated | 93.95 | |
| PLN00112 | 444 | malate dehydrogenase (NADP); Provisional | 93.41 | |
| PTZ00374 | 1108 | dihydroxyacetone phosphate acyltransferase; Provis | 93.39 | |
| PRK07877 | 722 | hypothetical protein; Provisional | 93.36 | |
| PRK08040 | 336 | putative semialdehyde dehydrogenase; Provisional | 93.31 | |
| PRK05600 | 370 | thiamine biosynthesis protein ThiF; Validated | 93.25 | |
| PRK13982 | 475 | bifunctional SbtC-like/phosphopantothenoylcysteine | 93.25 | |
| PRK07411 | 390 | hypothetical protein; Validated | 93.24 | |
| COG0136 | 334 | Asd Aspartate-semialdehyde dehydrogenase [Amino ac | 93.21 | |
| cd05291 | 306 | HicDH_like L-2-hydroxyisocapronate dehydrogenases | 93.18 | |
| cd01483 | 143 | E1_enzyme_family Superfamily of activating enzymes | 93.16 | |
| COG0039 | 313 | Mdh Malate/lactate dehydrogenases [Energy producti | 93.05 | |
| PRK00436 | 343 | argC N-acetyl-gamma-glutamyl-phosphate reductase; | 93.03 | |
| PRK09496 | 453 | trkA potassium transporter peripheral membrane com | 92.86 | |
| TIGR01772 | 312 | MDH_euk_gproteo malate dehydrogenase, NAD-dependen | 92.8 | |
| TIGR02354 | 200 | thiF_fam2 thiamine biosynthesis protein ThiF, fami | 92.77 | |
| PF01113 | 124 | DapB_N: Dihydrodipicolinate reductase, N-terminus; | 92.63 | |
| cd05293 | 312 | LDH_1 A subgroup of L-lactate dehydrogenases. L-la | 92.47 | |
| KOG1198 | 347 | consensus Zinc-binding oxidoreductase [Energy prod | 92.32 | |
| PRK00258 | 278 | aroE shikimate 5-dehydrogenase; Reviewed | 92.23 | |
| cd01489 | 312 | Uba2_SUMO Ubiquitin activating enzyme (E1) subunit | 92.15 | |
| cd05295 | 452 | MDH_like Malate dehydrogenase-like. These MDH-like | 91.9 | |
| PRK06728 | 347 | aspartate-semialdehyde dehydrogenase; Provisional | 91.81 | |
| TIGR01757 | 387 | Malate-DH_plant malate dehydrogenase, NADP-depende | 91.51 | |
| PRK00048 | 257 | dihydrodipicolinate reductase; Provisional | 91.47 | |
| KOG4022 | 236 | consensus Dihydropteridine reductase DHPR/QDPR [Am | 91.45 | |
| cd00650 | 263 | LDH_MDH_like NAD-dependent, lactate dehydrogenase- | 91.28 | |
| cd01065 | 155 | NAD_bind_Shikimate_DH NAD(P) binding domain of Shi | 91.21 | |
| cd01080 | 168 | NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of | 91.2 | |
| COG1179 | 263 | Dinucleotide-utilizing enzymes involved in molybdo | 90.94 | |
| cd08259 | 332 | Zn_ADH5 Alcohol dehydrogenases of the MDR family. | 90.85 | |
| PLN02602 | 350 | lactate dehydrogenase | 90.81 | |
| PRK06153 | 393 | hypothetical protein; Provisional | 90.6 | |
| cd01484 | 234 | E1-2_like Ubiquitin activating enzyme (E1), repeat | 90.54 | |
| PRK08664 | 349 | aspartate-semialdehyde dehydrogenase; Reviewed | 90.52 | |
| TIGR00507 | 270 | aroE shikimate 5-dehydrogenase. This model finds p | 90.43 | |
| PF02254 | 116 | TrkA_N: TrkA-N domain; InterPro: IPR003148 The reg | 90.17 | |
| PTZ00117 | 319 | malate dehydrogenase; Provisional | 90.07 | |
| PRK14192 | 283 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 89.91 | |
| PRK09496 | 453 | trkA potassium transporter peripheral membrane com | 89.87 | |
| PRK12749 | 288 | quinate/shikimate dehydrogenase; Reviewed | 89.73 | |
| cd05290 | 307 | LDH_3 A subgroup of L-lactate dehydrogenases. L-la | 89.68 | |
| PRK01710 | 458 | murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn | 89.62 | |
| PF02670 | 129 | DXP_reductoisom: 1-deoxy-D-xylulose 5-phosphate re | 89.61 | |
| PRK14851 | 679 | hypothetical protein; Provisional | 89.54 | |
| TIGR01408 | 1008 | Ube1 ubiquitin-activating enzyme E1. This model re | 89.44 | |
| cd01491 | 286 | Ube1_repeat1 Ubiquitin activating enzyme (E1), rep | 89.27 | |
| PRK06223 | 307 | malate dehydrogenase; Reviewed | 89.23 | |
| PRK06901 | 322 | aspartate-semialdehyde dehydrogenase; Provisional | 89.0 | |
| PRK06129 | 308 | 3-hydroxyacyl-CoA dehydrogenase; Validated | 88.84 | |
| TIGR01745 | 366 | asd_gamma aspartate-semialdehyde dehydrogenase, ga | 88.79 | |
| cd08294 | 329 | leukotriene_B4_DH_like 13-PGR is a bifunctional en | 88.7 | |
| cd01487 | 174 | E1_ThiF_like E1_ThiF_like. Member of superfamily o | 88.6 | |
| PF02826 | 178 | 2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehy | 88.45 | |
| COG0604 | 326 | Qor NADPH:quinone reductase and related Zn-depende | 88.45 | |
| cd08295 | 338 | double_bond_reductase_like Arabidopsis alkenal dou | 88.31 | |
| PRK13940 | 414 | glutamyl-tRNA reductase; Provisional | 88.16 | |
| PRK04148 | 134 | hypothetical protein; Provisional | 88.1 | |
| PRK14175 | 286 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 87.69 | |
| cd05292 | 308 | LDH_2 A subgroup of L-lactate dehydrogenases. L-la | 87.69 | |
| COG0002 | 349 | ArgC Acetylglutamate semialdehyde dehydrogenase [A | 87.59 | |
| smart00859 | 122 | Semialdhyde_dh Semialdehyde dehydrogenase, NAD bin | 87.54 | |
| TIGR01915 | 219 | npdG NADPH-dependent F420 reductase. This model re | 87.46 | |
| cd08253 | 325 | zeta_crystallin Zeta-crystallin with NADP-dependen | 87.43 | |
| KOG1494 | 345 | consensus NAD-dependent malate dehydrogenase [Ener | 87.24 | |
| TIGR01381 | 664 | E1_like_apg7 E1-like protein-activating enzyme Gsa | 87.16 | |
| cd08250 | 329 | Mgc45594_like Mgc45594 gene product and other MDR | 87.01 | |
| TIGR02853 | 287 | spore_dpaA dipicolinic acid synthetase, A subunit. | 86.97 | |
| PRK14852 | 989 | hypothetical protein; Provisional | 86.86 | |
| cd01493 | 425 | APPBP1_RUB Ubiquitin activating enzyme (E1) subuni | 86.62 | |
| cd05188 | 271 | MDR Medium chain reductase/dehydrogenase (MDR)/zin | 86.45 | |
| cd08266 | 342 | Zn_ADH_like1 Alcohol dehydrogenases of the MDR fam | 86.4 | |
| cd08293 | 345 | PTGR2 Prostaglandin reductase. Prostaglandins and | 86.18 | |
| TIGR02825 | 325 | B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15 | 86.14 | |
| KOG1178 | 1032 | consensus Non-ribosomal peptide synthetase/alpha-a | 85.94 | |
| PRK06849 | 389 | hypothetical protein; Provisional | 85.85 | |
| TIGR03693 | 637 | ocin_ThiF_like putative thiazole-containing bacter | 85.61 | |
| COG0289 | 266 | DapB Dihydrodipicolinate reductase [Amino acid tra | 85.54 | |
| PRK06598 | 369 | aspartate-semialdehyde dehydrogenase; Reviewed | 85.26 | |
| TIGR00978 | 341 | asd_EA aspartate-semialdehyde dehydrogenase (non-p | 85.24 | |
| PRK13243 | 333 | glyoxylate reductase; Reviewed | 85.17 | |
| TIGR01763 | 305 | MalateDH_bact malate dehydrogenase, NAD-dependent. | 84.95 | |
| PRK15469 | 312 | ghrA bifunctional glyoxylate/hydroxypyruvate reduc | 84.38 | |
| PRK06718 | 202 | precorrin-2 dehydrogenase; Reviewed | 84.14 | |
| cd05276 | 323 | p53_inducible_oxidoreductase PIG3 p53-inducible qu | 84.08 | |
| PTZ00082 | 321 | L-lactate dehydrogenase; Provisional | 83.96 | |
| cd05288 | 329 | PGDH Prostaglandin dehydrogenases. Prostaglandins | 83.74 | |
| cd01339 | 300 | LDH-like_MDH L-lactate dehydrogenase-like malate d | 83.57 | |
| PRK08306 | 296 | dipicolinate synthase subunit A; Reviewed | 83.52 | |
| KOG0023 | 360 | consensus Alcohol dehydrogenase, class V [Secondar | 82.93 | |
| COG0569 | 225 | TrkA K+ transport systems, NAD-binding component [ | 82.8 | |
| PRK11199 | 374 | tyrA bifunctional chorismate mutase/prephenate deh | 82.51 | |
| PRK04308 | 445 | murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn | 82.4 | |
| TIGR01851 | 310 | argC_other N-acetyl-gamma-glutamyl-phosphate reduc | 82.09 | |
| KOG2018 | 430 | consensus Predicted dinucleotide-utilizing enzyme | 82.06 | |
| PRK12549 | 284 | shikimate 5-dehydrogenase; Reviewed | 81.98 | |
| TIGR01809 | 282 | Shik-DH-AROM shikimate-5-dehydrogenase, fungal ARO | 81.88 | |
| PRK14027 | 283 | quinate/shikimate dehydrogenase; Provisional | 81.55 | |
| cd01486 | 307 | Apg7 Apg7 is an E1-like protein, that activates tw | 81.46 | |
| cd08268 | 328 | MDR2 Medium chain dehydrogenases/reductase (MDR)/z | 81.45 | |
| PRK01438 | 480 | murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn | 81.2 | |
| COG4982 | 866 | 3-oxoacyl-[acyl-carrier protein] | 81.07 | |
| TIGR02824 | 325 | quinone_pig3 putative NAD(P)H quinone oxidoreducta | 81.01 | |
| cd08292 | 324 | ETR_like_2 2-enoyl thioester reductase (ETR) like | 80.91 | |
| cd01488 | 291 | Uba3_RUB Ubiquitin activating enzyme (E1) subunit | 80.62 | |
| PF05185 | 448 | PRMT5: PRMT5 arginine-N-methyltransferase; InterPr | 80.62 | |
| PF12683 | 275 | DUF3798: Protein of unknown function (DUF3798); In | 80.51 | |
| PRK14194 | 301 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 80.34 | |
| PRK09880 | 343 | L-idonate 5-dehydrogenase; Provisional | 80.3 | |
| TIGR01771 | 299 | L-LDH-NAD L-lactate dehydrogenase. This model repr | 80.28 | |
| PRK00045 | 423 | hemA glutamyl-tRNA reductase; Reviewed | 80.28 | |
| COG0169 | 283 | AroE Shikimate 5-dehydrogenase [Amino acid transpo | 80.14 | |
| TIGR01470 | 205 | cysG_Nterm siroheme synthase, N-terminal domain. T | 80.11 |
| >KOG1221 consensus Acyl-CoA reductase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-86 Score=681.04 Aligned_cols=420 Identities=40% Similarity=0.683 Sum_probs=381.9
Q ss_pred CCCcchhhhcCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccc
Q 010075 1 MELGSVVEFLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLN 80 (519)
Q Consensus 1 ~~~~~i~~~~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~ 80 (519)
|+.+.|++||+||+|||||||||+|++|+|+||+.+|+|++||+|+|+++++++.+|+.++..+ ++|+.+++..|+.
T Consensus 1 ~~~~~i~~f~~~k~i~vTG~tGFlgKVliEklLr~~p~v~~IYlLiR~k~g~~~~~Rl~~~~~~-~lF~~l~~~~p~~-- 77 (467)
T KOG1221|consen 1 MEISDIVQFYKNKTIFVTGATGFLGKVLIEKLLRTTPDVKRIYLLIRAKKGKAAQERLRTELKD-PLFEVLKEKKPEA-- 77 (467)
T ss_pred CCcccHHHHhCCCeEEEEcccchhHHHHHHHHHhcCcCcceEEEEEecCCCCCHHHHHHHHHhh-hHHHHHHhhCccc--
Confidence 5667799999999999999999999999999999999999999999999999999999965555 9999999999863
Q ss_pred cccCCceEEEeccCCCCCCCCChhhhHHHHhcCccEEEEcCccCCccccHHHHHHHhHHHHHHHHHHHHhccCCceEEEE
Q 010075 81 SFISEKITFVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKFDERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHV 160 (519)
Q Consensus 81 ~~~~~~v~~v~gDl~~~~lgls~~~~~~~l~~~vdiViH~Aa~v~f~~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V~v 160 (519)
.+|+.+|.||+++++||+++.|.. .+.++||+|||+||+++|+++++.++.+|+.||++++++|+++.+++.|+||
T Consensus 78 ---l~Kv~pi~GDi~~~~LGis~~D~~-~l~~eV~ivih~AAtvrFde~l~~al~iNt~Gt~~~l~lak~~~~l~~~vhV 153 (467)
T KOG1221|consen 78 ---LEKVVPIAGDISEPDLGISESDLR-TLADEVNIVIHSAATVRFDEPLDVALGINTRGTRNVLQLAKEMVKLKALVHV 153 (467)
T ss_pred ---eecceeccccccCcccCCChHHHH-HHHhcCCEEEEeeeeeccchhhhhhhhhhhHhHHHHHHHHHHhhhhheEEEe
Confidence 589999999999999999999986 8999999999999999999999999999999999999999999999999999
Q ss_pred ecceeecCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcHHHHHHHHHHH
Q 010075 161 STAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEM 240 (519)
Q Consensus 161 STa~v~~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~Y~~sK~~aE~ 240 (519)
||+|+++.. +.++|++|++....++++.+++. ++++++.+++..+ +...+|||||++||+++|+
T Consensus 154 STAy~n~~~-~~i~E~~y~~~~~~~~~~~i~~~---------~~~~~~~ld~~~~------~l~~~~PNTYtfTKal~E~ 217 (467)
T KOG1221|consen 154 STAYSNCNV-GHIEEKPYPMPETCNPEKILKLD---------ENLSDELLDQKAP------KLLGGWPNTYTFTKALAEM 217 (467)
T ss_pred ehhheeccc-ccccccccCccccCCHHHHHhhh---------ccchHHHHHHhhH------HhcCCCCCceeehHhhHHH
Confidence 999999555 58999999977777888877655 4778888877544 3455999999999999999
Q ss_pred HHHHhhcCCcEEEEecCccccCCCCCCCcccccccccHHHHHHhhcCCceeeccCCCceeeeeeHHHHHHHHHHHHHHhc
Q 010075 241 LMQQSKENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMIVAMVAHA 320 (519)
Q Consensus 241 lv~~~~~~lp~~IvRPs~V~g~~~~p~~gw~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~d~vpVDdva~aii~a~~~~~ 320 (519)
++.+++.++|++|+|||+|.++++||+|||++|.+|+.+++.++++|.++.+.++++...|+||||+|||++++++|...
T Consensus 218 ~i~~~~~~lPivIiRPsiI~st~~EP~pGWidn~~gp~g~i~g~gkGvlr~~~~d~~~~adiIPvD~vvN~~ia~~~~~~ 297 (467)
T KOG1221|consen 218 VIQKEAENLPLVIIRPSIITSTYKEPFPGWIDNLNGPDGVIIGYGKGVLRCFLVDPKAVADIIPVDMVVNAMIASAWQHA 297 (467)
T ss_pred HHHhhccCCCeEEEcCCceeccccCCCCCccccCCCCceEEEEeccceEEEEEEccccccceeeHHHHHHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999876
Q ss_pred cCCC--CCcEEEecCCCCCchhH-----------------------------------HHHHHHHHHHHHHHHHHHhhhh
Q 010075 321 KQPS--DANIYHVGSSLRNPVTL-----------------------------------GLQVANTVFHNFFKGVYNDLRK 363 (519)
Q Consensus 321 ~~~~--~~~iyni~s~~~~~i~~-----------------------------------~~~~~~~~~p~~~~~~~~~~~~ 363 (519)
.... ...|||++++..||++| ..-++.+++|+++.|.+.++.+
T Consensus 298 ~~~~~~~~~IY~~tss~~Np~t~~~~~e~~~~~~~~~Pl~~~iw~P~~~~~sn~~~f~~~~~~~h~lPa~~~d~~~~i~g 377 (467)
T KOG1221|consen 298 GNSKEKTPPIYHLTSSNDNPVTWGDFIELALRYFEKIPLEKMIWYPFGTLTSNPWLFNLAAFLYHTLPAYILDLLLRLLG 377 (467)
T ss_pred ccCCCCCCcEEEecccccCcccHHHHHHHHHHhcccCCcccceeccCceeeecHhHHHHHHHHHHHhhHHHHHHHHHHhC
Confidence 5433 36799999999999999 1223456789999999887765
Q ss_pred H-------HHHHHHHHHhcccccccceEEechhHHHHHHHhcCCCCCCccccCCCCCCCHHHHHhhcchhhHHHHHhCC-
Q 010075 364 K-------VKFVMRVVEIYKPYFYFNGIFDDTNTEKLRMTARGSRTETDLFYFDPDSIEWSDYFMNTHIPGVEKLLQQK- 435 (519)
Q Consensus 364 ~-------~~~~~~~~~~~~~f~~~~w~F~~~n~~~L~~~l~~~Dr~~~~F~fD~~~idW~~Y~~~~~~~Girkyllke- 435 (519)
+ +.++++...++++|+.++|.||++|+.+|++.|+++|++ +|+||++++||++||.+ |++|+|+|++||
T Consensus 378 ~k~~~~k~~~ki~~~~~~l~~f~~~~w~Fd~~n~~~L~~~~~~~d~~--~f~fd~~~ldW~ey~~~-~i~G~r~~llKe~ 454 (467)
T KOG1221|consen 378 KKPRLVKLYRKIHKLVKLLEPFSLFKWIFDNKNTEKLREKMSEEDKR--LFNFDMKQLDWEEYFNR-HLLGLRKYLLKES 454 (467)
T ss_pred CChhhhHHHHHHHHHHHhhhhheeceEEecCccHHHHHHhCCHHHHh--hcCCCcccCCHHHHHHH-HHHHHHHHHhcCC
Confidence 4 455778888999999999999999999999999999977 99999999999999999 599999999999
Q ss_pred -CCcchhhhhhccC
Q 010075 436 -RSFPKTKVFRSGH 448 (519)
Q Consensus 436 -~~~~~ar~~~~~~ 448 (519)
+++|+|| ++++
T Consensus 455 ~e~l~~~r--~~~k 466 (467)
T KOG1221|consen 455 PESLPQAR--KRLK 466 (467)
T ss_pred hhhhHHHH--Hhhc
Confidence 8999999 6553
|
|
| >PLN02503 fatty acyl-CoA reductase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-75 Score=630.51 Aligned_cols=425 Identities=40% Similarity=0.731 Sum_probs=364.0
Q ss_pred chhhhcCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccC
Q 010075 5 SVVEFLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFIS 84 (519)
Q Consensus 5 ~i~~~~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~ 84 (519)
.|++||+||+|||||||||||++|+++||+++|+|.+||+|+|++++.++.+|+.++++++++|++++++.|..+.++..
T Consensus 112 ~I~~f~~~k~VlVTGaTGFLGk~LlekLLr~~~~v~kIy~LvR~k~~~~a~eRl~~~l~~~~lf~~l~~~~g~~~~~~~~ 191 (605)
T PLN02503 112 GIAEFLRGKNFLITGATGFLAKVLIEKILRTNPDVGKIYLLIKAKDKEAAIERLKNEVIDAELFKCLQETHGKSYQSFML 191 (605)
T ss_pred chhhhhcCCEEEEcCCchHHHHHHHHHHHHhCCCCcEEEEEEecCCchhHHHHHHHHHhhhhhHHHHHHhcCcccccccc
Confidence 48999999999999999999999999999999999999999999999999999988999999999999998877666777
Q ss_pred CceEEEeccCCCCCCCCChhhhHHHHhcCccEEEEcCccCCccccHHHHHHHhHHHHHHHHHHHHhccCCceEEEEecce
Q 010075 85 EKITFVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKFDERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAY 164 (519)
Q Consensus 85 ~~v~~v~gDl~~~~lgls~~~~~~~l~~~vdiViH~Aa~v~f~~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V~vSTa~ 164 (519)
+|++++.||+++++|||++++. +.+.+++|+|||+||.++++++++.++++|+.||.+++++|++++++++|||+||+|
T Consensus 192 ~Ki~~v~GDl~d~~LGLs~~~~-~~L~~~vDiVIH~AA~v~f~~~~~~a~~vNV~GT~nLLelA~~~~~lk~fV~vSTay 270 (605)
T PLN02503 192 SKLVPVVGNVCESNLGLEPDLA-DEIAKEVDVIINSAANTTFDERYDVAIDINTRGPCHLMSFAKKCKKLKLFLQVSTAY 270 (605)
T ss_pred ccEEEEEeeCCCcccCCCHHHH-HHHHhcCCEEEECccccccccCHHHHHHHHHHHHHHHHHHHHHcCCCCeEEEccCce
Confidence 8999999999999999988876 477788999999999999999999999999999999999999987889999999999
Q ss_pred eecCcCCeeecccCCCC-----------------CCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCC
Q 010075 165 VAGERTGLILENPLDGA-----------------SGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGW 227 (519)
Q Consensus 165 v~~~~~~~i~E~~~~e~-----------------~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~ 227 (519)
|||...|.+.|++|+.. +++|++++++++.+.... ..+++++...|+++|++++...+|
T Consensus 271 VyG~~~G~i~E~~y~~~~~i~~~~~~~~~~~~~~~~~d~~~~~~~~~d~~~~----~~~~~~~~~~l~~~g~~~~~~~~~ 346 (605)
T PLN02503 271 VNGQRQGRIMEKPFRMGDCIARELGISNSLPHNRPALDIEAEIKLALDSKRH----GFQSNSFAQKMKDLGLERAKLYGW 346 (605)
T ss_pred eecCCCCeeeeeecCcccccccccccccccccccccCCHHHHHHHHHHhhhc----ccchHHHHHHhhhcccchhhhCCC
Confidence 99998889999999732 456888887766322111 234556777789999999999999
Q ss_pred CcHHHHHHHHHHHHHHHhhcCCcEEEEecCccccCCCCCCCcccccccccHHHHHHhhcCCceeeccCCCceeeeeeHHH
Q 010075 228 PNTYVFTKTMGEMLMQQSKENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDM 307 (519)
Q Consensus 228 ~n~Y~~sK~~aE~lv~~~~~~lp~~IvRPs~V~g~~~~p~~gw~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~d~vpVDd 307 (519)
||+|++||++||++++++..++|++|+||++|.++++||+|||+++.+...+.+..+++|.++.++++++...|+||||+
T Consensus 347 pNtYt~TK~lAE~lV~~~~~~LPv~IvRPsiV~st~~eP~pGw~d~~~~~~p~~~~~g~G~lr~~~~~~~~~~DiVPVD~ 426 (605)
T PLN02503 347 QDTYVFTKAMGEMVINSMRGDIPVVIIRPSVIESTWKDPFPGWMEGNRMMDPIVLYYGKGQLTGFLADPNGVLDVVPADM 426 (605)
T ss_pred CChHHHHHHHHHHHHHHhcCCCCEEEEcCCEecccccCCccccccCccccchhhhheeccceeEEEeCCCeeEeEEeecH
Confidence 99999999999999998888999999999999999999999999996666666666789999999999999999999999
Q ss_pred HHHHHHHHHHHhccC-CCCCcEEEecCCCCCchhH--HH----------------------------HHHHHHHHHHHHH
Q 010075 308 VVNAMIVAMVAHAKQ-PSDANIYHVGSSLRNPVTL--GL----------------------------QVANTVFHNFFKG 356 (519)
Q Consensus 308 va~aii~a~~~~~~~-~~~~~iyni~s~~~~~i~~--~~----------------------------~~~~~~~p~~~~~ 356 (519)
|||+++++++..... ...+++|||+++..||++| ++ ..+..++...+.|
T Consensus 427 vvna~i~a~a~~~~~~~~~~~vYn~ts~~~nP~t~~~~~~~~~~~~~~~P~~~~~~~~~~~~~~~~~~~~~~~~~h~~~d 506 (605)
T PLN02503 427 VVNATLAAMAKHGGAAKPEINVYQIASSVVNPLVFQDLARLLYEHYKSSPYMDSKGRPIHVPPMKLFSSMEDFSSHLWRD 506 (605)
T ss_pred HHHHHHHHHHhhhcccCCCCCEEEeCCCCCCCeEHHHHHHHHHHHHhhCCcccccCcceeccCceehhhHHHHHHHHHHH
Confidence 999999996643322 2247899999999999999 11 1111112223344
Q ss_pred HHHhhh------------hH--------HHHHHHHHHhcccccccceEEechhHHHHHHHhcCCCCCCccccCCCCCCCH
Q 010075 357 VYNDLR------------KK--------VKFVMRVVEIYKPYFYFNGIFDDTNTEKLRMTARGSRTETDLFYFDPDSIEW 416 (519)
Q Consensus 357 ~~~~~~------------~~--------~~~~~~~~~~~~~f~~~~w~F~~~n~~~L~~~l~~~Dr~~~~F~fD~~~idW 416 (519)
.+.++. +. ..++..+.+++++|++++|.|+++|+++|++.|+++|++ +|+||++.|||
T Consensus 507 ~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~ft~~~w~F~~~n~~~L~~~ms~~Dr~--~F~~D~~~idW 584 (605)
T PLN02503 507 ALLRSGLAGMSSSDRKLSQKLENICAKSVEQAKYLASIYEPYTFYGGRFDNSNTQRLMERMSEEEKA--EFGFDVGSIDW 584 (605)
T ss_pred HHHHHhhhcccccChHHHHHHHHHHHHHHHHHHHHHHHHhhheeCeEEEechHHHHHHHhCCHHHhh--ccCCCcCCCCH
Confidence 443331 11 123455888999999999999999999999999999977 99999999999
Q ss_pred HHHHhhcchhhHHHHHhCCC
Q 010075 417 SDYFMNTHIPGVEKLLQQKR 436 (519)
Q Consensus 417 ~~Y~~~~~~~Girkyllke~ 436 (519)
++||++.|++|+|||++|++
T Consensus 585 ~~Y~~~~~i~G~rky~lk~~ 604 (605)
T PLN02503 585 RDYITNVHIPGLRRHVMKGR 604 (605)
T ss_pred HHHHHHhhhhHHHHHHhccC
Confidence 99999855999999999985
|
|
| >PLN02996 fatty acyl-CoA reductase | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.6e-75 Score=621.41 Aligned_cols=433 Identities=59% Similarity=0.973 Sum_probs=379.5
Q ss_pred CCcchhhhcCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccc
Q 010075 2 ELGSVVEFLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNS 81 (519)
Q Consensus 2 ~~~~i~~~~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~ 81 (519)
+.++|++||+||+|||||||||||++|+++||++++++++||+|+|++++.++.+|+..++.+.++|+++++..|..+.+
T Consensus 1 ~~~~i~~~~~~k~VlvTGaTGFlG~~ll~~LL~~~~~v~~I~~LvR~~~~~~~~~rl~~~~~~~~~f~~~~~~~~~~~~~ 80 (491)
T PLN02996 1 EEGSCVQFLENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRASDAKSATQRLHDEVIGKDLFKVLREKLGENLNS 80 (491)
T ss_pred CcccHHHHhCCCeEEEeCCCcHHHHHHHHHHHhhCCCCCEEEEEEeCCCCCCHHHHHHHHHhhchHHHHHHHhcchhhhh
Confidence 35689999999999999999999999999999999999999999999999999999988899999999999988866655
Q ss_pred ccCCceEEEeccCCCCCCCCChhhhHHHHhcCccEEEEcCccCCccccHHHHHHHhHHHHHHHHHHHHhccCCceEEEEe
Q 010075 82 FISEKITFVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKFDERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVS 161 (519)
Q Consensus 82 ~~~~~v~~v~gDl~~~~lgls~~~~~~~l~~~vdiViH~Aa~v~f~~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V~vS 161 (519)
+..++++++.||+++|+|||++.+..+.+.+++|+|||+||.++++++++.+.++|+.||.+++++|++++++++|||+|
T Consensus 81 ~~~~kv~~i~GDl~~~~LGLs~~~~~~~l~~~vD~ViH~AA~v~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~~k~~V~vS 160 (491)
T PLN02996 81 LISEKVTPVPGDISYDDLGVKDSNLREEMWKEIDIVVNLAATTNFDERYDVALGINTLGALNVLNFAKKCVKVKMLLHVS 160 (491)
T ss_pred hhhcCEEEEecccCCcCCCCChHHHHHHHHhCCCEEEECccccCCcCCHHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEe
Confidence 56689999999999999999998866678889999999999999999999999999999999999999987889999999
Q ss_pred cceeecCcCCeeecccCCCCC------CCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcHHHHHH
Q 010075 162 TAYVAGERTGLILENPLDGAS------GLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTK 235 (519)
Q Consensus 162 Ta~v~~~~~~~i~E~~~~e~~------~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~Y~~sK 235 (519)
|++|||...+.++|++|++.. +.|++++.+.+++.+.++..++++++.++..++++|++++...+|||+|++||
T Consensus 161 T~~vyG~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pn~Y~~TK 240 (491)
T PLN02996 161 TAYVCGEKSGLILEKPFHMGETLNGNRKLDINEEKKLVKEKLKELNEQDASEEEITQAMKDLGMERAKLHGWPNTYVFTK 240 (491)
T ss_pred eeEEecCCCceeeeecCCCcccccccccCChHHHHHHHHHHHHHHHhhcCCHHHHHHHhhhhchhHHHhCCCCCchHhhH
Confidence 999999887788999987432 34788888777767777777789999999999999999999999999999999
Q ss_pred HHHHHHHHHhhcCCcEEEEecCccccCCCCCCCcccccccccHHHHHHhhcCCceeeccCCCceeeeeeHHHHHHHHHHH
Q 010075 236 TMGEMLMQQSKENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMIVA 315 (519)
Q Consensus 236 ~~aE~lv~~~~~~lp~~IvRPs~V~g~~~~p~~gw~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~d~vpVDdva~aii~a 315 (519)
++||+++.++..++|++|+||++|+|++++|.|||+++++++.+++.++++|..+.+++++++.+|+|||||||++++.+
T Consensus 241 ~~aE~lv~~~~~~lpv~i~RP~~V~G~~~~p~~gwi~~~~~~~~i~~~~~~g~~~~~~gdg~~~~D~v~Vddvv~a~l~a 320 (491)
T PLN02996 241 AMGEMLLGNFKENLPLVIIRPTMITSTYKEPFPGWIEGLRTIDSVIVGYGKGKLTCFLADPNSVLDVIPADMVVNAMIVA 320 (491)
T ss_pred HHHHHHHHHhcCCCCEEEECCCEeccCCcCCCCCcccchhhHHHHHHHhccceEeEEecCCCeecceecccHHHHHHHHH
Confidence 99999999887799999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhccCCCCCcEEEecCCCCCchhH-----------------------------------HH----HHHHHHHHHHHHH
Q 010075 316 MVAHAKQPSDANIYHVGSSLRNPVTL-----------------------------------GL----QVANTVFHNFFKG 356 (519)
Q Consensus 316 ~~~~~~~~~~~~iyni~s~~~~~i~~-----------------------------------~~----~~~~~~~p~~~~~ 356 (519)
++........+++||++|+..+|++| .. ..+...+|+++.|
T Consensus 321 ~~~~~~~~~~~~vYNi~s~~~~~~s~~ei~~~~~~~~~~~p~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~lp~~~~~ 400 (491)
T PLN02996 321 MAAHAGGQGSEIIYHVGSSLKNPVKFSNLHDFAYRYFSKNPWINKEGSPVKVGKGTILSTMASFSLYMTIRYLLPLKALQ 400 (491)
T ss_pred HHHhhccCCCCcEEEecCCCCCcccHHHHHHHHHHHhhhCCCcCCCCCeEeeCCceecCcHHHHHHHHHHHHHhHHHHHH
Confidence 98642121235799999998888888 11 1223336766665
Q ss_pred HHHh--h-------hhHHHHH---HHHHHhcccccccceEEechhHHHHHHHhcCCC-CCCccccCCCCCCCHHHHHhhc
Q 010075 357 VYND--L-------RKKVKFV---MRVVEIYKPYFYFNGIFDDTNTEKLRMTARGSR-TETDLFYFDPDSIEWSDYFMNT 423 (519)
Q Consensus 357 ~~~~--~-------~~~~~~~---~~~~~~~~~f~~~~w~F~~~n~~~L~~~l~~~D-r~~~~F~fD~~~idW~~Y~~~~ 423 (519)
.+.. . .+...++ +++.+++++|++++|.|+++|+++|++.|+++| .++++|+||++.+||++||+++
T Consensus 401 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~w~f~~~n~~~l~~~~~~~d~~d~~~f~~d~~~~~w~~y~~~~ 480 (491)
T PLN02996 401 LVNIILPKRYGDKYTDLNRKIKLVMRLVDLYKPYVFFKGIFDDTNTEKLRIKRKETGKEEADMFDFDPKSIDWEDYMTNV 480 (491)
T ss_pred HHHHHhhhccChHHHHHHHHHHHHHHHHHHhhccccceEEEccHHHHHHHHHCCccccccccEeccCcccCCHHHHHHHh
Confidence 5443 1 1122334 667999999999999999999999999999977 4444999999999999999996
Q ss_pred chhhHHHHHhC
Q 010075 424 HIPGVEKLLQQ 434 (519)
Q Consensus 424 ~~~Girkyllk 434 (519)
|++|+|||++|
T Consensus 481 ~~~g~~~y~~k 491 (491)
T PLN02996 481 HIPGLVKYVLK 491 (491)
T ss_pred hHHHHHHHhcC
Confidence 69999999997
|
|
| >PF07993 NAD_binding_4: Male sterility protein; InterPro: IPR013120 This family represents the C-terminal NAD-binding region of the male sterility protein from Arabidopsis and Drosophila | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-41 Score=333.92 Aligned_cols=246 Identities=32% Similarity=0.520 Sum_probs=170.7
Q ss_pred EeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEEeccCCC
Q 010075 17 VSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVPGDISS 96 (519)
Q Consensus 17 ITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v~gDl~~ 96 (519)
|||||||||++|+++|++.++++ +||||+|+++...+.+|+.+.+.+..+++...++. .+|++++.||+++
T Consensus 1 lTGaTGflG~~ll~~Ll~~~~~~-~I~cLvR~~~~~~~~~rl~~~l~~~~~~~~~~~~~--------~~ri~~v~GDl~~ 71 (249)
T PF07993_consen 1 LTGATGFLGSHLLEELLRQPPDV-KIYCLVRASSSQSALERLKDALKEYGLWDDLDKEA--------LSRIEVVEGDLSQ 71 (249)
T ss_dssp EE-TTSHHHHHHHHHHHHHS-TT-EEEEEE-SSSHHHHHHHHHGGG-SS-HHHHH-HHH--------TTTEEEEE--TTS
T ss_pred CcCCCcHHHHHHHHHHHcCCCCc-EEEEEEeCcccccchhhhhhhcccccchhhhhhhh--------hccEEEEeccccc
Confidence 79999999999999999998766 99999999999899999987777777777664322 4899999999999
Q ss_pred CCCCCChhhhHHHHhcCccEEEEcCccCCccccHHHHHHHhHHHHHHHHHHHHhccCCceEEEEecceeecCcCCeeecc
Q 010075 97 EDLGLKDSNLKEELWNELDIMVNSAAITKFDERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAYVAGERTGLILEN 176 (519)
Q Consensus 97 ~~lgls~~~~~~~l~~~vdiViH~Aa~v~f~~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V~vSTa~v~~~~~~~i~E~ 176 (519)
|+|||+++++. .+.+++|+||||||.++|..+++.+.++||.||++++++|.+. +.++|+|+||+++.+...+.+.|+
T Consensus 72 ~~lGL~~~~~~-~L~~~v~~IiH~Aa~v~~~~~~~~~~~~NV~gt~~ll~la~~~-~~~~~~~iSTa~v~~~~~~~~~~~ 149 (249)
T PF07993_consen 72 PNLGLSDEDYQ-ELAEEVDVIIHCAASVNFNAPYSELRAVNVDGTRNLLRLAAQG-KRKRFHYISTAYVAGSRPGTIEEK 149 (249)
T ss_dssp GGGG--HHHHH-HHHHH--EEEE--SS-SBS-S--EEHHHHHHHHHHHHHHHTSS-S---EEEEEEGGGTTS-TTT--SS
T ss_pred cccCCChHHhh-ccccccceeeecchhhhhcccchhhhhhHHHHHHHHHHHHHhc-cCcceEEeccccccCCCCCccccc
Confidence 99999988874 8889999999999999999999999999999999999999986 445999999998888776555554
Q ss_pred cCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcHHHHHHHHHHHHHHHhh--cCCcEEEE
Q 010075 177 PLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLMQQSK--ENLSLVII 254 (519)
Q Consensus 177 ~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~Y~~sK~~aE~lv~~~~--~~lp~~Iv 254 (519)
.+++.. ........++|+|+.||++||++++++. .++|++|+
T Consensus 150 ~~~~~~------------------------------------~~~~~~~~~~~gY~~SK~~aE~~l~~a~~~~g~p~~I~ 193 (249)
T PF07993_consen 150 VYPEEE------------------------------------DDLDPPQGFPNGYEQSKWVAERLLREAAQRHGLPVTIY 193 (249)
T ss_dssp S-HHH--------------------------------------EEE--TTSEE-HHHHHHHHHHHHHHHHHHH---EEEE
T ss_pred cccccc------------------------------------ccchhhccCCccHHHHHHHHHHHHHHHHhcCCceEEEE
Confidence 432000 0011233788999999999999999883 48999999
Q ss_pred ecCccccCCCCCCCccccccc-ccHHHHHHhhcCCceeeccCCCceeeeeeHHHHHHHH
Q 010075 255 RPTVVSGTYKEPFPGWVEDLK-TINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAM 312 (519)
Q Consensus 255 RPs~V~g~~~~p~~gw~~~~~-~~~~~i~~~~~g~~~~~~~~~~~~~d~vpVDdva~ai 312 (519)
|||.|+|. +.+||.+... .+..+...+..|..+..+++++...|++|||+||++|
T Consensus 194 Rp~~i~g~---~~~G~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~d~vPVD~va~aI 249 (249)
T PF07993_consen 194 RPGIIVGD---SRTGWWNSDDFFPYLLRSCIALGAFPDLPGDPDARLDLVPVDYVARAI 249 (249)
T ss_dssp EE-EEE-S---SSSS---TTBHHHHHHHHHHHH-EEES-SB---TT--EEEHHHHHHHH
T ss_pred ecCccccc---CCCceeeccchHHHHHHHHHHcCCcccccCCCCceEeEECHHHHHhhC
Confidence 99999994 5578888877 5556666778888888888888889999999999986
|
A sequence-related jojoba acyl CoA reductase is also included.; PDB: 4DQV_A. |
| >COG3320 Putative dehydrogenase domain of multifunctional non-ribosomal peptide synthetases and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.7e-34 Score=282.93 Aligned_cols=248 Identities=23% Similarity=0.363 Sum_probs=189.3
Q ss_pred CEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEEec
Q 010075 13 KTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVPG 92 (519)
Q Consensus 13 k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v~g 92 (519)
++||+||||||+|.+|+++||..-+ .+||||||.++.+.+.+||++.+-.... +.+...++|+++.|
T Consensus 1 ~~vlLTGATGFLG~yLl~eLL~~~~--~kv~cLVRA~s~E~a~~RL~~~~~~~~~-----------~~e~~~~ri~vv~g 67 (382)
T COG3320 1 RNVLLTGATGFLGAYLLLELLDRSD--AKVICLVRAQSDEAALARLEKTFDLYRH-----------WDELSADRVEVVAG 67 (382)
T ss_pred CeEEEecCchHhHHHHHHHHHhcCC--CcEEEEEecCCHHHHHHHHHHHhhhhhh-----------hhhhhcceEEEEec
Confidence 5799999999999999999999754 7999999999999999999854321221 22334589999999
Q ss_pred cCCCCCCCCChhhhHHHHhcCccEEEEcCccCCccccHHHHHHHhHHHHHHHHHHHHhccCCceEEEEecceeecCcCCe
Q 010075 93 DISSEDLGLKDSNLKEELWNELDIMVNSAAITKFDERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAYVAGERTGL 172 (519)
Q Consensus 93 Dl~~~~lgls~~~~~~~l~~~vdiViH~Aa~v~f~~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V~vSTa~v~~~~~~~ 172 (519)
|+++|++||++.++. .|.+++|.|||+||.+++-.++++....||.||.+++++|.+. +.|.|+||||.+|.......
T Consensus 68 Dl~e~~lGL~~~~~~-~La~~vD~I~H~gA~Vn~v~pYs~L~~~NVlGT~evlrLa~~g-k~Kp~~yVSsisv~~~~~~~ 145 (382)
T COG3320 68 DLAEPDLGLSERTWQ-ELAENVDLIIHNAALVNHVFPYSELRGANVLGTAEVLRLAATG-KPKPLHYVSSISVGETEYYS 145 (382)
T ss_pred ccccccCCCCHHHHH-HHhhhcceEEecchhhcccCcHHHhcCcchHhHHHHHHHHhcC-CCceeEEEeeeeeccccccC
Confidence 999999999999985 9999999999999999999999999999999999999999985 88999999999998754321
Q ss_pred eecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcHHHHHHHHHHHHHHHh-hcCCcE
Q 010075 173 ILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLMQQS-KENLSL 251 (519)
Q Consensus 173 i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~Y~~sK~~aE~lv~~~-~~~lp~ 251 (519)
-.+... + .+ +++ .-....+.++|+.|||.||.+++++ ..|+|+
T Consensus 146 ~~~~~~------~--~~-----------------~~~-----------~~~~~~~~~GY~~SKwvaE~Lvr~A~~rGLpv 189 (382)
T COG3320 146 NFTVDF------D--EI-----------------SPT-----------RNVGQGLAGGYGRSKWVAEKLVREAGDRGLPV 189 (382)
T ss_pred CCcccc------c--cc-----------------ccc-----------ccccCccCCCcchhHHHHHHHHHHHhhcCCCe
Confidence 000000 0 00 000 0012367889999999999999998 559999
Q ss_pred EEEecCccccCCCCCCCcccccccccHHHHHHhh-cCCceeeccCCCceeeeeeHHHHHHHHHHHHHH
Q 010075 252 VIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASA-QGNLRCLVGETKVIMDVIPVDMVVNAMIVAMVA 318 (519)
Q Consensus 252 ~IvRPs~V~g~~~~p~~gw~~~~~~~~~~i~~~~-~g~~~~~~~~~~~~~d~vpVDdva~aii~a~~~ 318 (519)
+|+|||.|.|+.+ .|-.+.......++..+. .|.. | +.....|.+|+|.+++++...+..
T Consensus 190 ~I~Rpg~I~gds~---tG~~n~~D~~~Rlv~~~~~lg~~---P-~~~~~~~~~p~~~v~~~v~~~~~~ 250 (382)
T COG3320 190 TIFRPGYITGDSR---TGALNTRDFLTRLVLGLLQLGIA---P-DSEYSLDMLPVDHVARAVVAPSVQ 250 (382)
T ss_pred EEEecCeeeccCc---cCccccchHHHHHHHHHHHhCCC---C-CcccchhhCccceeeEEeehhhhh
Confidence 9999999999987 444444455556555443 2332 2 334556778877777776665543
|
|
| >COG1088 RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.3e-32 Score=260.12 Aligned_cols=243 Identities=23% Similarity=0.303 Sum_probs=193.8
Q ss_pred CEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEEec
Q 010075 13 KTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVPG 92 (519)
Q Consensus 13 k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v~g 92 (519)
|++|||||.||||+..++.+++..++ .+|+++..=.-.. ..+.|. .+. -..+..+++|
T Consensus 1 ~~iLVTGGaGFIGsnfvr~~~~~~~d-~~v~~~DkLTYAg-n~~~l~-~~~-------------------~~~~~~fv~~ 58 (340)
T COG1088 1 MKILVTGGAGFIGSNFVRYILNKHPD-DHVVNLDKLTYAG-NLENLA-DVE-------------------DSPRYRFVQG 58 (340)
T ss_pred CcEEEecCcchHHHHHHHHHHhcCCC-ceEEEEecccccC-CHHHHH-hhh-------------------cCCCceEEec
Confidence 57999999999999999999999988 4677765432111 111111 110 1258899999
Q ss_pred cCCCCCCCCChhhhHHHHhc--CccEEEEcCccCCcc---ccHHHHHHHhHHHHHHHHHHHHhccCCceEEEEecceeec
Q 010075 93 DISSEDLGLKDSNLKEELWN--ELDIMVNSAAITKFD---ERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAYVAG 167 (519)
Q Consensus 93 Dl~~~~lgls~~~~~~~l~~--~vdiViH~Aa~v~f~---~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V~vSTa~v~~ 167 (519)
|+. +.+.+..++. ++|+|+|.||..+.+ ......+++|+.||.+||+++++.....+|+||||..|||
T Consensus 59 DI~-------D~~~v~~~~~~~~~D~VvhfAAESHVDRSI~~P~~Fi~TNv~GT~~LLEaar~~~~~frf~HISTDEVYG 131 (340)
T COG1088 59 DIC-------DRELVDRLFKEYQPDAVVHFAAESHVDRSIDGPAPFIQTNVVGTYTLLEAARKYWGKFRFHHISTDEVYG 131 (340)
T ss_pred ccc-------CHHHHHHHHHhcCCCeEEEechhccccccccChhhhhhcchHHHHHHHHHHHHhcccceEEEeccccccc
Confidence 999 5555567776 599999999998876 4567789999999999999999974335899999999999
Q ss_pred CcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcHHHHHHHHHHHHHHHh--
Q 010075 168 ERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLMQQS-- 245 (519)
Q Consensus 168 ~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~Y~~sK~~aE~lv~~~-- 245 (519)
+.. .++..|+|.+|+ .|.++|+.||+.+..+++.+
T Consensus 132 ~l~--~~~~~FtE~tp~-----------------------------------------~PsSPYSASKAasD~lVray~~ 168 (340)
T COG1088 132 DLG--LDDDAFTETTPY-----------------------------------------NPSSPYSASKAASDLLVRAYVR 168 (340)
T ss_pred ccc--CCCCCcccCCCC-----------------------------------------CCCCCcchhhhhHHHHHHHHHH
Confidence 764 223345555554 56789999999999999998
Q ss_pred hcCCcEEEEecCccccCCCCCCCcccccccccHHHHHHhhcCCceeeccCCCceeeeeeHHHHHHHHHHHHHHhccCCCC
Q 010075 246 KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMIVAMVAHAKQPSD 325 (519)
Q Consensus 246 ~~~lp~~IvRPs~V~g~~~~p~~gw~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~d~vpVDdva~aii~a~~~~~~~~~~ 325 (519)
..++|++|.|+|+-|||++.|- ..++.++..+..|+..+++|+|.+++||++|+|-++|+-.++.+.. .
T Consensus 169 TYglp~~ItrcSNNYGPyqfpE-------KlIP~~I~nal~g~~lpvYGdG~~iRDWl~VeDh~~ai~~Vl~kg~----~ 237 (340)
T COG1088 169 TYGLPATITRCSNNYGPYQFPE-------KLIPLMIINALLGKPLPVYGDGLQIRDWLYVEDHCRAIDLVLTKGK----I 237 (340)
T ss_pred HcCCceEEecCCCCcCCCcCch-------hhhHHHHHHHHcCCCCceecCCcceeeeEEeHhHHHHHHHHHhcCc----C
Confidence 6799999999999999998652 5666778889999999999999999999999999999999886422 3
Q ss_pred CcEEEecCCCCCc
Q 010075 326 ANIYHVGSSLRNP 338 (519)
Q Consensus 326 ~~iyni~s~~~~~ 338 (519)
+++||++++.+..
T Consensus 238 GE~YNIgg~~E~~ 250 (340)
T COG1088 238 GETYNIGGGNERT 250 (340)
T ss_pred CceEEeCCCccch
Confidence 7899999986543
|
|
| >PRK15181 Vi polysaccharide biosynthesis protein TviC; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.6e-31 Score=272.09 Aligned_cols=263 Identities=15% Similarity=0.178 Sum_probs=189.5
Q ss_pred cCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccH-HHHHHHHHhhhhhHHHHHhhhccccccccCCceE
Q 010075 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSA-ALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKIT 88 (519)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~-~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~ 88 (519)
+++|+|||||||||||++|+++|++.+ .+|+++.|...+... ...+. ...+ .....++.
T Consensus 13 ~~~~~vlVtGatGfiG~~lv~~L~~~g---~~V~~~d~~~~~~~~~~~~~~-------------~~~~----~~~~~~~~ 72 (348)
T PRK15181 13 LAPKRWLITGVAGFIGSGLLEELLFLN---QTVIGLDNFSTGYQHNLDDVR-------------TSVS----EEQWSRFI 72 (348)
T ss_pred ccCCEEEEECCccHHHHHHHHHHHHCC---CEEEEEeCCCCcchhhhhhhh-------------hccc----cccCCceE
Confidence 577999999999999999999999988 578899886533211 11110 0000 00124688
Q ss_pred EEeccCCCCCCCCChhhhHHHHhcCccEEEEcCccCCcc---ccHHHHHHHhHHHHHHHHHHHHhccCCceEEEEeccee
Q 010075 89 FVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKFD---ERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAYV 165 (519)
Q Consensus 89 ~v~gDl~~~~lgls~~~~~~~l~~~vdiViH~Aa~v~f~---~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V~vSTa~v 165 (519)
++.||+.+ .+....+++++|+|||+||..... .+.....++|+.||.+++++|++. ++++|||+||+.+
T Consensus 73 ~~~~Di~d-------~~~l~~~~~~~d~ViHlAa~~~~~~~~~~~~~~~~~Nv~gt~nll~~~~~~-~~~~~v~~SS~~v 144 (348)
T PRK15181 73 FIQGDIRK-------FTDCQKACKNVDYVLHQAALGSVPRSLKDPIATNSANIDGFLNMLTAARDA-HVSSFTYAASSST 144 (348)
T ss_pred EEEccCCC-------HHHHHHHhhCCCEEEECccccCchhhhhCHHHHHHHHHHHHHHHHHHHHHc-CCCeEEEeechHh
Confidence 99999995 333457778899999999976432 445667999999999999999996 8999999999999
Q ss_pred ecCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcHHHHHHHHHHHHHHHh
Q 010075 166 AGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLMQQS 245 (519)
Q Consensus 166 ~~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~Y~~sK~~aE~lv~~~ 245 (519)
||...+ .+..|+.+ ..+.+.|+.||..+|.+++.+
T Consensus 145 yg~~~~----~~~~e~~~-----------------------------------------~~p~~~Y~~sK~~~e~~~~~~ 179 (348)
T PRK15181 145 YGDHPD----LPKIEERI-----------------------------------------GRPLSPYAVTKYVNELYADVF 179 (348)
T ss_pred hCCCCC----CCCCCCCC-----------------------------------------CCCCChhhHHHHHHHHHHHHH
Confidence 986421 11111111 134578999999999999876
Q ss_pred --hcCCcEEEEecCccccCCCCCCCcccccccccHHHHHHhhcCCceeeccCCCceeeeeeHHHHHHHHHHHHHHhccCC
Q 010075 246 --KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMIVAMVAHAKQP 323 (519)
Q Consensus 246 --~~~lp~~IvRPs~V~g~~~~p~~gw~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~d~vpVDdva~aii~a~~~~~~~~ 323 (519)
..+++++++||+.|||+...|...+ . ..+..++..+..|....+.+++++.+|+|||||+|++++.++..... .
T Consensus 180 ~~~~~~~~~~lR~~~vyGp~~~~~~~~-~--~~i~~~~~~~~~~~~i~~~g~g~~~rd~i~v~D~a~a~~~~~~~~~~-~ 255 (348)
T PRK15181 180 ARSYEFNAIGLRYFNVFGRRQNPNGAY-S--AVIPRWILSLLKDEPIYINGDGSTSRDFCYIENVIQANLLSATTNDL-A 255 (348)
T ss_pred HHHhCCCEEEEEecceeCcCCCCCCcc-c--cCHHHHHHHHHcCCCcEEeCCCCceEeeEEHHHHHHHHHHHHhcccc-c
Confidence 4589999999999999976432111 0 12345566667777777789999999999999999999887753211 1
Q ss_pred CCCcEEEecCCCCCchhHHHHHHHHH
Q 010075 324 SDANIYHVGSSLRNPVTLGLQVANTV 349 (519)
Q Consensus 324 ~~~~iyni~s~~~~~i~~~~~~~~~~ 349 (519)
..+++||++++...++..++..+...
T Consensus 256 ~~~~~yni~~g~~~s~~e~~~~i~~~ 281 (348)
T PRK15181 256 SKNKVYNVAVGDRTSLNELYYLIRDG 281 (348)
T ss_pred CCCCEEEecCCCcEeHHHHHHHHHHH
Confidence 13579999999777766555555443
|
|
| >PF01073 3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/isomerase family; InterPro: IPR002225 The enzyme 3 beta-hydroxysteroid dehydrogenase/5-ene-4-ene isomerase (3 beta-HSD) catalyses the oxidation and isomerisation of 5-ene-3 beta-hydroxypregnene and 5-ene-hydroxyandrostene steroid precursors into the corresponding 4-ene-ketosteroids necessary for the formation of all classes of steroid hormones | Back alignment and domain information |
|---|
Probab=99.98 E-value=1.3e-30 Score=259.80 Aligned_cols=240 Identities=19% Similarity=0.247 Sum_probs=178.5
Q ss_pred EEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEEeccCC
Q 010075 16 LVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVPGDIS 95 (519)
Q Consensus 16 lITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v~gDl~ 95 (519)
||||||||||++|+++|++.|+ +.+|.++.|........ .+. ..+...++.||++
T Consensus 1 LVTGgsGflG~~iv~~Ll~~g~-~~~Vr~~d~~~~~~~~~-~~~-----------------------~~~~~~~~~~Di~ 55 (280)
T PF01073_consen 1 LVTGGSGFLGSHIVRQLLERGY-IYEVRVLDRSPPPKFLK-DLQ-----------------------KSGVKEYIQGDIT 55 (280)
T ss_pred CEEcCCcHHHHHHHHHHHHCCC-ceEEEEcccccccccch-hhh-----------------------cccceeEEEeccc
Confidence 6999999999999999999985 56888888776543211 000 0133349999999
Q ss_pred CCCCCCChhhhHHHHhcCccEEEEcCccCCcc--ccHHHHHHHhHHHHHHHHHHHHhccCCceEEEEecceeecCcC--C
Q 010075 96 SEDLGLKDSNLKEELWNELDIMVNSAAITKFD--ERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAYVAGERT--G 171 (519)
Q Consensus 96 ~~~lgls~~~~~~~l~~~vdiViH~Aa~v~f~--~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V~vSTa~v~~~~~--~ 171 (519)
+ .+.+...++++|+|||+||.+... .+.+..+++||.||++++++|++. ++++|||+||..+++... .
T Consensus 56 d-------~~~l~~a~~g~d~V~H~Aa~~~~~~~~~~~~~~~vNV~GT~nvl~aa~~~-~VkrlVytSS~~vv~~~~~~~ 127 (280)
T PF01073_consen 56 D-------PESLEEALEGVDVVFHTAAPVPPWGDYPPEEYYKVNVDGTRNVLEAARKA-GVKRLVYTSSISVVFDNYKGD 127 (280)
T ss_pred c-------HHHHHHHhcCCceEEEeCccccccCcccHHHHHHHHHHHHHHHHHHHHHc-CCCEEEEEcCcceeEeccCCC
Confidence 4 444568889999999999987654 467889999999999999999996 999999999999987621 1
Q ss_pred eeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcHHHHHHHHHHHHHHHhh-----
Q 010075 172 LILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLMQQSK----- 246 (519)
Q Consensus 172 ~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~Y~~sK~~aE~lv~~~~----- 246 (519)
.+.+. +|..+. ...+.+.|+.||++||++++++.
T Consensus 128 ~~~~~--dE~~~~---------------------------------------~~~~~~~Y~~SK~~AE~~V~~a~~~~~~ 166 (280)
T PF01073_consen 128 PIING--DEDTPY---------------------------------------PSSPLDPYAESKALAEKAVLEANGSELK 166 (280)
T ss_pred CcccC--CcCCcc---------------------------------------cccccCchHHHHHHHHHHHHhhcccccc
Confidence 11000 011111 11366789999999999999873
Q ss_pred --cCCcEEEEecCccccCCCCCCCcccccccccHHHHHHhhcCCceeeccCCCceeeeeeHHHHHHHHHHHHHHhccC--
Q 010075 247 --ENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMIVAMVAHAKQ-- 322 (519)
Q Consensus 247 --~~lp~~IvRPs~V~g~~~~p~~gw~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~d~vpVDdva~aii~a~~~~~~~-- 322 (519)
..+.++++||+.|||+.... ....+...+..|......+++....|+++|++||.|++.|+......
T Consensus 167 ~g~~l~t~~lRP~~IyGp~d~~---------~~~~~~~~~~~g~~~~~~g~~~~~~~~vyV~NvA~ahvlA~~~L~~~~~ 237 (280)
T PF01073_consen 167 NGGRLRTCALRPAGIYGPGDQR---------LVPRLVKMVRSGLFLFQIGDGNNLFDFVYVENVAHAHVLAAQALLEPGK 237 (280)
T ss_pred cccceeEEEEeccEEeCccccc---------ccchhhHHHHhcccceeecCCCceECcEeHHHHHHHHHHHHHHhccccc
Confidence 24899999999999997632 12233444556656677788889999999999999999998753322
Q ss_pred --CCCCcEEEecCCCCCc
Q 010075 323 --PSDANIYHVGSSLRNP 338 (519)
Q Consensus 323 --~~~~~iyni~s~~~~~ 338 (519)
...+++|+|+++++.+
T Consensus 238 ~~~~~G~~y~itd~~p~~ 255 (280)
T PF01073_consen 238 PERVAGQAYFITDGEPVP 255 (280)
T ss_pred cccCCCcEEEEECCCccC
Confidence 2358999999985543
|
3Beta_HSD; GO: 0003854 3-beta-hydroxy-delta5-steroid dehydrogenase activity, 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0006694 steroid biosynthetic process, 0055114 oxidation-reduction process |
| >COG1087 GalE UDP-glucose 4-epimerase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=99.97 E-value=4.2e-30 Score=247.03 Aligned_cols=253 Identities=22% Similarity=0.306 Sum_probs=193.4
Q ss_pred CEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEEec
Q 010075 13 KTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVPG 92 (519)
Q Consensus 13 k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v~g 92 (519)
|+||||||+||||++.+..|++.| .+|.++..-..+... -+. ...+.+++|
T Consensus 1 ~~iLVtGGAGYIGSHtv~~Ll~~G---~~vvV~DNL~~g~~~--~v~------------------------~~~~~f~~g 51 (329)
T COG1087 1 MKVLVTGGAGYIGSHTVRQLLKTG---HEVVVLDNLSNGHKI--ALL------------------------KLQFKFYEG 51 (329)
T ss_pred CeEEEecCcchhHHHHHHHHHHCC---CeEEEEecCCCCCHH--Hhh------------------------hccCceEEe
Confidence 589999999999999999999999 455666554333211 110 011579999
Q ss_pred cCCCCCCCCChhhhHHHHhc--CccEEEEcCccCCccc---cHHHHHHHhHHHHHHHHHHHHhccCCceEEEEecceeec
Q 010075 93 DISSEDLGLKDSNLKEELWN--ELDIMVNSAAITKFDE---RYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAYVAG 167 (519)
Q Consensus 93 Dl~~~~lgls~~~~~~~l~~--~vdiViH~Aa~v~f~~---~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V~vSTa~v~~ 167 (519)
|+. +...+.++++ ++|.|||+||.....| .+-+.++.||.||..|+++|++. ++++|||-|||.|||
T Consensus 52 Di~-------D~~~L~~vf~~~~idaViHFAa~~~VgESv~~Pl~Yy~NNv~gTl~Ll~am~~~-gv~~~vFSStAavYG 123 (329)
T COG1087 52 DLL-------DRALLTAVFEENKIDAVVHFAASISVGESVQNPLKYYDNNVVGTLNLIEAMLQT-GVKKFIFSSTAAVYG 123 (329)
T ss_pred ccc-------cHHHHHHHHHhcCCCEEEECccccccchhhhCHHHHHhhchHhHHHHHHHHHHh-CCCEEEEecchhhcC
Confidence 999 5555556664 6999999999976654 45567999999999999999997 899999999999999
Q ss_pred CcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcHHHHHHHHHHHHHHHh--
Q 010075 168 ERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLMQQS-- 245 (519)
Q Consensus 168 ~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~Y~~sK~~aE~lv~~~-- 245 (519)
.... .|.+|+.+. .+.|+|+.||.+.|++++.+
T Consensus 124 ~p~~----~PI~E~~~~-----------------------------------------~p~NPYG~sKlm~E~iL~d~~~ 158 (329)
T COG1087 124 EPTT----SPISETSPL-----------------------------------------APINPYGRSKLMSEEILRDAAK 158 (329)
T ss_pred CCCC----cccCCCCCC-----------------------------------------CCCCcchhHHHHHHHHHHHHHH
Confidence 8652 334333332 56899999999999999987
Q ss_pred hcCCcEEEEecCccccCCCCC-CCcccccccccHHHHHHhhcCCce--eec------cCCCceeeeeeHHHHHHHHHHHH
Q 010075 246 KENLSLVIIRPTVVSGTYKEP-FPGWVEDLKTINTLFVASAQGNLR--CLV------GETKVIMDVIPVDMVVNAMIVAM 316 (519)
Q Consensus 246 ~~~lp~~IvRPs~V~g~~~~p-~~gw~~~~~~~~~~i~~~~~g~~~--~~~------~~~~~~~d~vpVDdva~aii~a~ 316 (519)
..++.++++|-.++.|+..+. +..|..+.+.+..++...+.|+.. .++ .||..++|+|||.|+|+|++.|+
T Consensus 159 a~~~~~v~LRYFN~aGA~~~G~iGe~~~~~thLip~~~q~A~G~r~~l~ifG~DY~T~DGT~iRDYIHV~DLA~aH~~Al 238 (329)
T COG1087 159 ANPFKVVILRYFNVAGACPDGTLGQRYPGATLLIPVAAEAALGKRDKLFIFGDDYDTKDGTCIRDYIHVDDLADAHVLAL 238 (329)
T ss_pred hCCCcEEEEEecccccCCCCCccCCCCCCcchHHHHHHHHHhcCCceeEEeCCCCCCCCCCeeeeeeehhHHHHHHHHHH
Confidence 567999999999999987542 344555556666677767667654 333 35788999999999999999999
Q ss_pred HHhccCCCCCcEEEecCCCCCchhHHHHHHHH
Q 010075 317 VAHAKQPSDANIYHVGSSLRNPVTLGLQVANT 348 (519)
Q Consensus 317 ~~~~~~~~~~~iyni~s~~~~~i~~~~~~~~~ 348 (519)
..... ++...+||+++|...++..++..+..
T Consensus 239 ~~L~~-~g~~~~~NLG~G~G~SV~evi~a~~~ 269 (329)
T COG1087 239 KYLKE-GGSNNIFNLGSGNGFSVLEVIEAAKK 269 (329)
T ss_pred HHHHh-CCceeEEEccCCCceeHHHHHHHHHH
Confidence 87654 33347999999999887665555443
|
|
| >KOG1502 consensus Flavonol reductase/cinnamoyl-CoA reductase [Defense mechanisms] | Back alignment and domain information |
|---|
Probab=99.97 E-value=6.6e-29 Score=245.27 Aligned_cols=265 Identities=17% Similarity=0.187 Sum_probs=195.1
Q ss_pred CCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEE
Q 010075 11 ENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFV 90 (519)
Q Consensus 11 ~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v 90 (519)
.+++|+|||||||||+++++.||.+| ++|.+.+|+..+....+.+.+ + . ...+++..+
T Consensus 5 ~~~~VcVTGAsGfIgswivk~LL~rG---Y~V~gtVR~~~~~k~~~~L~~-l------------~------~a~~~l~l~ 62 (327)
T KOG1502|consen 5 EGKKVCVTGASGFIGSWIVKLLLSRG---YTVRGTVRDPEDEKKTEHLRK-L------------E------GAKERLKLF 62 (327)
T ss_pred CCcEEEEeCCchHHHHHHHHHHHhCC---CEEEEEEcCcchhhhHHHHHh-c------------c------cCcccceEE
Confidence 57999999999999999999999999 678999999876444333331 1 1 123679999
Q ss_pred eccCCCCCCCCChhhhHHHHhcCccEEEEcCccCCcccc--HHHHHHHhHHHHHHHHHHHHhccCCceEEEEecceeecC
Q 010075 91 PGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKFDER--YDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAYVAGE 168 (519)
Q Consensus 91 ~gDl~~~~lgls~~~~~~~l~~~vdiViH~Aa~v~f~~~--~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V~vSTa~v~~~ 168 (519)
.+||.+ .+.....++++|.|||+|+.+.|+.. ..+.++.+|.||.++|++|++.+.++++|++||..+...
T Consensus 63 ~aDL~d-------~~sf~~ai~gcdgVfH~Asp~~~~~~~~e~~li~pav~Gt~nVL~ac~~~~sVkrvV~TSS~aAv~~ 135 (327)
T KOG1502|consen 63 KADLLD-------EGSFDKAIDGCDGVFHTASPVDFDLEDPEKELIDPAVKGTKNVLEACKKTKSVKRVVYTSSTAAVRY 135 (327)
T ss_pred eccccc-------cchHHHHHhCCCEEEEeCccCCCCCCCcHHhhhhHHHHHHHHHHHHHhccCCcceEEEeccHHHhcc
Confidence 999994 45556888999999999999988533 558899999999999999999877999999999877654
Q ss_pred cCCee-ecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcHHHHHHHHHHHHHHHh--
Q 010075 169 RTGLI-LENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLMQQS-- 245 (519)
Q Consensus 169 ~~~~i-~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~Y~~sK~~aE~lv~~~-- 245 (519)
+.... +..+++|+++.|.+-.. .--+-|..||.+||+..+++
T Consensus 136 ~~~~~~~~~vvdE~~wsd~~~~~-----------------------------------~~~~~Y~~sK~lAEkaAw~fa~ 180 (327)
T KOG1502|consen 136 NGPNIGENSVVDEESWSDLDFCR-----------------------------------CKKLWYALSKTLAEKAAWEFAK 180 (327)
T ss_pred CCcCCCCCcccccccCCcHHHHH-----------------------------------hhHHHHHHHHHHHHHHHHHHHH
Confidence 31111 22344554544432211 11267999999999999988
Q ss_pred hcCCcEEEEecCccccCCCCCCCcccccccccHHHHHHhhcCCceeeccCCCceeeeeeHHHHHHHHHHHHHHhccCCCC
Q 010075 246 KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMIVAMVAHAKQPSD 325 (519)
Q Consensus 246 ~~~lp~~IvRPs~V~g~~~~p~~gw~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~d~vpVDdva~aii~a~~~~~~~~~~ 325 (519)
..+++++.+-|+.|+||.-.| ..+.....+....+|...... .....+|||+|||+|++.|.+++..
T Consensus 181 e~~~~lv~inP~lV~GP~l~~------~l~~s~~~~l~~i~G~~~~~~---n~~~~~VdVrDVA~AHv~a~E~~~a---- 247 (327)
T KOG1502|consen 181 ENGLDLVTINPGLVFGPGLQP------SLNSSLNALLKLIKGLAETYP---NFWLAFVDVRDVALAHVLALEKPSA---- 247 (327)
T ss_pred hCCccEEEecCCceECCCccc------ccchhHHHHHHHHhcccccCC---CCceeeEeHHHHHHHHHHHHcCccc----
Confidence 557999999999999997755 234555667777778654443 2344599999999999999986543
Q ss_pred CcEEEecCCCCCchhHHHHHHHHHHHHH
Q 010075 326 ANIYHVGSSLRNPVTLGLQVANTVFHNF 353 (519)
Q Consensus 326 ~~iyni~s~~~~~i~~~~~~~~~~~p~~ 353 (519)
.+.|.|.++... ...+...+..++|.+
T Consensus 248 ~GRyic~~~~~~-~~ei~~~l~~~~P~~ 274 (327)
T KOG1502|consen 248 KGRYICVGEVVS-IKEIADILRELFPDY 274 (327)
T ss_pred CceEEEecCccc-HHHHHHHHHHhCCCC
Confidence 357988876443 333555555544444
|
|
| >PLN02427 UDP-apiose/xylose synthase | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.9e-28 Score=256.08 Aligned_cols=282 Identities=20% Similarity=0.224 Sum_probs=183.3
Q ss_pred CCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEE
Q 010075 11 ENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFV 90 (519)
Q Consensus 11 ~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v 90 (519)
+.|+|||||||||||++|+++|++.+. .+|+++.|+.... .++. .... .....+++++
T Consensus 13 ~~~~VlVTGgtGfIGs~lv~~L~~~~g--~~V~~l~r~~~~~---~~l~-------------~~~~----~~~~~~~~~~ 70 (386)
T PLN02427 13 KPLTICMIGAGGFIGSHLCEKLMTETP--HKVLALDVYNDKI---KHLL-------------EPDT----VPWSGRIQFH 70 (386)
T ss_pred cCcEEEEECCcchHHHHHHHHHHhcCC--CEEEEEecCchhh---hhhh-------------cccc----ccCCCCeEEE
Confidence 457899999999999999999999731 5788888764221 1111 0000 0012468999
Q ss_pred eccCCCCCCCCChhhhHHHHhcCccEEEEcCccCCc---cccHHHHHHHhHHHHHHHHHHHHhccCCceEEEEecceeec
Q 010075 91 PGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF---DERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAYVAG 167 (519)
Q Consensus 91 ~gDl~~~~lgls~~~~~~~l~~~vdiViH~Aa~v~f---~~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V~vSTa~v~~ 167 (519)
.+|+.+ .+....+++++|+|||+||.... ..+....+..|+.|+.+++++|++. + ++|||+||.++||
T Consensus 71 ~~Dl~d-------~~~l~~~~~~~d~ViHlAa~~~~~~~~~~~~~~~~~n~~gt~~ll~aa~~~-~-~r~v~~SS~~vYg 141 (386)
T PLN02427 71 RINIKH-------DSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSEN-N-KRLIHFSTCEVYG 141 (386)
T ss_pred EcCCCC-------hHHHHHHhhcCCEEEEcccccChhhhhhChHHHHHHHHHHHHHHHHHHHhc-C-CEEEEEeeeeeeC
Confidence 999995 33345677789999999997542 2344456788999999999999885 4 7999999999998
Q ss_pred CcCC-eeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcHHHHHHHHHHHHHHHh-
Q 010075 168 ERTG-LILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLMQQS- 245 (519)
Q Consensus 168 ~~~~-~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~Y~~sK~~aE~lv~~~- 245 (519)
...+ .++|. .++.++.... ..+|+.-. . .......+.+.|+.||.++|+++..+
T Consensus 142 ~~~~~~~~e~-----~p~~~~~~~~------------~~~e~~~~-----~--~~~~~~~~~~~Y~~sK~~~E~~~~~~~ 197 (386)
T PLN02427 142 KTIGSFLPKD-----HPLRQDPAFY------------VLKEDESP-----C--IFGSIEKQRWSYACAKQLIERLIYAEG 197 (386)
T ss_pred CCcCCCCCcc-----cccccccccc------------cccccccc-----c--ccCCCCccccchHHHHHHHHHHHHHHH
Confidence 6432 22222 1211100000 00000000 0 00001123468999999999999876
Q ss_pred -hcCCcEEEEecCccccCCCCCCCccc---ccc-cccHHHHHHhhcCCceeeccCCCceeeeeeHHHHHHHHHHHHHHhc
Q 010075 246 -KENLSLVIIRPTVVSGTYKEPFPGWV---EDL-KTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMIVAMVAHA 320 (519)
Q Consensus 246 -~~~lp~~IvRPs~V~g~~~~p~~gw~---~~~-~~~~~~i~~~~~g~~~~~~~~~~~~~d~vpVDdva~aii~a~~~~~ 320 (519)
..+++++|+||+.|||+.....+|.. ... ..+..++..+..|....+.+++++.+|+|||||+|++++.++....
T Consensus 198 ~~~g~~~~ilR~~~vyGp~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~g~g~~~r~~i~V~Dva~ai~~al~~~~ 277 (386)
T PLN02427 198 AENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRREPLKLVDGGQSQRTFVYIKDAIEAVLLMIENPA 277 (386)
T ss_pred hhcCCceEEecccceeCCCCCccccccccccccchHHHHHHHHHhcCCCeEEECCCCceECcEeHHHHHHHHHHHHhCcc
Confidence 46899999999999999864333210 000 1122334455667666777888899999999999999999886432
Q ss_pred cCCCCCcEEEecCC-CCCchhHHHHHHHHH
Q 010075 321 KQPSDANIYHVGSS-LRNPVTLGLQVANTV 349 (519)
Q Consensus 321 ~~~~~~~iyni~s~-~~~~i~~~~~~~~~~ 349 (519)
. ..+++||++++ ...++..++..+...
T Consensus 278 ~--~~g~~yni~~~~~~~s~~el~~~i~~~ 305 (386)
T PLN02427 278 R--ANGHIFNVGNPNNEVTVRQLAEMMTEV 305 (386)
T ss_pred c--ccCceEEeCCCCCCccHHHHHHHHHHH
Confidence 1 12579999987 355655555555443
|
|
| >PLN02572 UDP-sulfoquinovose synthase | Back alignment and domain information |
|---|
Probab=99.96 E-value=3.3e-28 Score=257.74 Aligned_cols=277 Identities=15% Similarity=0.117 Sum_probs=181.9
Q ss_pred hhhhcCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcc-c-------------HHHHHHHHHhhhhhHHHH
Q 010075 6 VVEFLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADID-S-------------AALRFQNEVLAKDVFNVL 71 (519)
Q Consensus 6 i~~~~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~-~-------------~~~rl~~~~~~~~~f~~l 71 (519)
.+.-+++|+|||||||||||++|+++|++.| .+|+++.|..... . ..+++. .+
T Consensus 41 ~~~~~~~k~VLVTGatGfIGs~Lv~~L~~~G---~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~l~----------~~ 107 (442)
T PLN02572 41 SSSSSKKKKVMVIGGDGYCGWATALHLSKRG---YEVAIVDNLCRRLFDHQLGLDSLTPIASIHERVR----------RW 107 (442)
T ss_pred CCccccCCEEEEECCCcHHHHHHHHHHHHCC---CeEEEEeccccccccccccccccccccchHHHHH----------HH
Confidence 3445788999999999999999999999988 5677765422110 0 011111 00
Q ss_pred HhhhccccccccCCceEEEeccCCCCCCCCChhhhHHHHhc--CccEEEEcCccCCcc------ccHHHHHHHhHHHHHH
Q 010075 72 KEKWGTRLNSFISEKITFVPGDISSEDLGLKDSNLKEELWN--ELDIMVNSAAITKFD------ERYDVAFGINTLGVIH 143 (519)
Q Consensus 72 ~~~~~~~~~~~~~~~v~~v~gDl~~~~lgls~~~~~~~l~~--~vdiViH~Aa~v~f~------~~~~~~~~~Nv~gt~~ 143 (519)
... ...+++++.+|+++ .+....+++ ++|+|||+|+..... +.....+++|+.||.+
T Consensus 108 ~~~--------~~~~v~~v~~Dl~d-------~~~v~~~l~~~~~D~ViHlAa~~~~~~~~~~~~~~~~~~~~Nv~gt~n 172 (442)
T PLN02572 108 KEV--------SGKEIELYVGDICD-------FEFLSEAFKSFEPDAVVHFGEQRSAPYSMIDRSRAVFTQHNNVIGTLN 172 (442)
T ss_pred HHh--------hCCcceEEECCCCC-------HHHHHHHHHhCCCCEEEECCCcccChhhhcChhhHHHHHHHHHHHHHH
Confidence 000 01468899999995 333445555 599999999875321 1234557899999999
Q ss_pred HHHHHHhccCCc-eEEEEecceeecCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhcccccc
Q 010075 144 LVNFAKKCVKLK-VFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERA 222 (519)
Q Consensus 144 ll~~a~~~~~l~-~~V~vSTa~v~~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~ 222 (519)
++++|++. +++ +|||+||..+||.....++|...+++.... |+. +.
T Consensus 173 lleaa~~~-gv~~~~V~~SS~~vYG~~~~~~~E~~i~~~~~~~---------------------e~~-----------~~ 219 (442)
T PLN02572 173 VLFAIKEF-APDCHLVKLGTMGEYGTPNIDIEEGYITITHNGR---------------------TDT-----------LP 219 (442)
T ss_pred HHHHHHHh-CCCccEEEEecceecCCCCCCCcccccccccccc---------------------ccc-----------cc
Confidence 99999986 664 899999999998643333443221110000 000 00
Q ss_pred ccCCCCcHHHHHHHHHHHHHHHh--hcCCcEEEEecCccccCCCCCC---Ccccccc-------cccHHHHHHhhcCCce
Q 010075 223 KLHGWPNTYVFTKTMGEMLMQQS--KENLSLVIIRPTVVSGTYKEPF---PGWVEDL-------KTINTLFVASAQGNLR 290 (519)
Q Consensus 223 ~~~~~~n~Y~~sK~~aE~lv~~~--~~~lp~~IvRPs~V~g~~~~p~---~gw~~~~-------~~~~~~i~~~~~g~~~ 290 (519)
.+..+.+.|+.||..+|.+++.+ ..+++++++||+.|||++..+. +..+..+ ..+..++..+..|...
T Consensus 220 ~~~~P~s~Yg~SK~a~E~l~~~~~~~~gl~~v~lR~~~vyGp~~~~~~~~~~li~~~~~~~~~~~~i~~~~~~~~~g~~i 299 (442)
T PLN02572 220 YPKQASSFYHLSKVHDSHNIAFTCKAWGIRATDLNQGVVYGVRTDETMMDEELINRLDYDGVFGTALNRFCVQAAVGHPL 299 (442)
T ss_pred CCCCCCCcchhHHHHHHHHHHHHHHhcCCCEEEEecccccCCCCcccccccccccccCcccchhhHHHHHHHHHhcCCCc
Confidence 01245678999999999999887 4589999999999999986431 1111110 2334455666778766
Q ss_pred eeccCCCceeeeeeHHHHHHHHHHHHHHhccCCCCCcEEEecCCCCCchhHHHHH
Q 010075 291 CLVGETKVIMDVIPVDMVVNAMIVAMVAHAKQPSDANIYHVGSSLRNPVTLGLQV 345 (519)
Q Consensus 291 ~~~~~~~~~~d~vpVDdva~aii~a~~~~~~~~~~~~iyni~s~~~~~i~~~~~~ 345 (519)
.+++++++.+||+||||+|++++.++..... .+...+||+++ ...++..+...
T Consensus 300 ~v~g~G~~~Rdfi~V~Dva~a~~~al~~~~~-~g~~~i~Nigs-~~~si~el~~~ 352 (442)
T PLN02572 300 TVYGKGGQTRGFLDIRDTVRCIEIAIANPAK-PGEFRVFNQFT-EQFSVNELAKL 352 (442)
T ss_pred eecCCCCEEECeEEHHHHHHHHHHHHhChhh-cCceeEEEeCC-CceeHHHHHHH
Confidence 7789999999999999999999999864211 11236899976 34443333333
|
|
| >PLN02260 probable rhamnose biosynthetic enzyme | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.9e-28 Score=271.94 Aligned_cols=258 Identities=24% Similarity=0.254 Sum_probs=186.5
Q ss_pred hhcCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCce
Q 010075 8 EFLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKI 87 (519)
Q Consensus 8 ~~~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v 87 (519)
+||++|+|||||||||||++|+++|++.+++ .+|+++.|...... ..++. .. ....++
T Consensus 2 ~~~~~~~VLVTGatGfIG~~lv~~Ll~~g~~-~~V~~~d~~~~~~~-~~~l~-------------~~-------~~~~~v 59 (668)
T PLN02260 2 ATYEPKNILITGAAGFIASHVANRLIRNYPD-YKIVVLDKLDYCSN-LKNLN-------------PS-------KSSPNF 59 (668)
T ss_pred CCCCCCEEEEECCCcHHHHHHHHHHHHhCCC-CEEEEEeCCCccch-hhhhh-------------hc-------ccCCCe
Confidence 5899999999999999999999999998655 47888887532111 11111 00 012578
Q ss_pred EEEeccCCCCCCCCChhhhHHHHh--cCccEEEEcCccCCccc---cHHHHHHHhHHHHHHHHHHHHhccCCceEEEEec
Q 010075 88 TFVPGDISSEDLGLKDSNLKEELW--NELDIMVNSAAITKFDE---RYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVST 162 (519)
Q Consensus 88 ~~v~gDl~~~~lgls~~~~~~~l~--~~vdiViH~Aa~v~f~~---~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V~vST 162 (519)
+++.+|++++ +....+. .++|+|||+||....+. +.....++|+.||.+++++|++.+.+++|||+||
T Consensus 60 ~~~~~Dl~d~-------~~~~~~~~~~~~D~ViHlAa~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~vkr~I~~SS 132 (668)
T PLN02260 60 KFVKGDIASA-------DLVNYLLITEGIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRFIHVST 132 (668)
T ss_pred EEEECCCCCh-------HHHHHHHhhcCCCEEEECCCccCchhhhhCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEcc
Confidence 9999999953 3333333 57999999999876542 3456789999999999999998755899999999
Q ss_pred ceeecCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcHHHHHHHHHHHHH
Q 010075 163 AYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLM 242 (519)
Q Consensus 163 a~v~~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~Y~~sK~~aE~lv 242 (519)
..+||....... ....|+.+ ..+.+.|+.||..+|+++
T Consensus 133 ~~vyg~~~~~~~-~~~~E~~~-----------------------------------------~~p~~~Y~~sK~~aE~~v 170 (668)
T PLN02260 133 DEVYGETDEDAD-VGNHEASQ-----------------------------------------LLPTNPYSATKAGAEMLV 170 (668)
T ss_pred hHHhCCCccccc-cCccccCC-----------------------------------------CCCCCCcHHHHHHHHHHH
Confidence 999986432100 00011111 135678999999999999
Q ss_pred HHh--hcCCcEEEEecCccccCCCCCCCcccccccccHHHHHHhhcCCceeeccCCCceeeeeeHHHHHHHHHHHHHHhc
Q 010075 243 QQS--KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMIVAMVAHA 320 (519)
Q Consensus 243 ~~~--~~~lp~~IvRPs~V~g~~~~p~~gw~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~d~vpVDdva~aii~a~~~~~ 320 (519)
..+ ..+++++|+||+.|||+...+. .....++..+..|....+++++++.+++|||||+|+++..++....
T Consensus 171 ~~~~~~~~l~~vilR~~~VyGp~~~~~-------~~i~~~~~~a~~g~~i~i~g~g~~~r~~ihV~Dva~a~~~~l~~~~ 243 (668)
T PLN02260 171 MAYGRSYGLPVITTRGNNVYGPNQFPE-------KLIPKFILLAMQGKPLPIHGDGSNVRSYLYCEDVAEAFEVVLHKGE 243 (668)
T ss_pred HHHHHHcCCCEEEECcccccCcCCCcc-------cHHHHHHHHHhCCCCeEEecCCCceEeeEEHHHHHHHHHHHHhcCC
Confidence 876 4589999999999999876321 1233455566667666778999999999999999999998875321
Q ss_pred cCCCCCcEEEecCCCCCchhHHHHHHH
Q 010075 321 KQPSDANIYHVGSSLRNPVTLGLQVAN 347 (519)
Q Consensus 321 ~~~~~~~iyni~s~~~~~i~~~~~~~~ 347 (519)
.+++||++++...++..++..+.
T Consensus 244 ----~~~vyni~~~~~~s~~el~~~i~ 266 (668)
T PLN02260 244 ----VGHVYNIGTKKERRVIDVAKDIC 266 (668)
T ss_pred ----CCCEEEECCCCeeEHHHHHHHHH
Confidence 25799999987666555444443
|
|
| >PRK07201 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.96 E-value=4.5e-28 Score=270.26 Aligned_cols=312 Identities=22% Similarity=0.347 Sum_probs=206.7
Q ss_pred CEEEEeCCccHHHHHHHHHHHH--hCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEE
Q 010075 13 KTILVSGVTGFVAKVFIEKILR--VQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFV 90 (519)
Q Consensus 13 k~VlITGaTGFlG~~Lv~~LL~--~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v 90 (519)
|+|||||||||||++|+++|++ .+ .+|++++|+... .++.. +....+ ..+++++
T Consensus 1 m~ILVTGatGfIG~~lv~~Ll~~~~g---~~V~~l~R~~~~----~~~~~----------~~~~~~-------~~~v~~~ 56 (657)
T PRK07201 1 MRYFVTGGTGFIGRRLVSRLLDRRRE---ATVHVLVRRQSL----SRLEA----------LAAYWG-------ADRVVPL 56 (657)
T ss_pred CeEEEeCCccHHHHHHHHHHHhcCCC---CEEEEEECcchH----HHHHH----------HHHhcC-------CCcEEEE
Confidence 5799999999999999999995 44 689999996422 12110 001110 1578999
Q ss_pred eccCCCCCCCCChhhhHHHHhcCccEEEEcCccCCccccHHHHHHHhHHHHHHHHHHHHhccCCceEEEEecceeecCcC
Q 010075 91 PGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKFDERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAYVAGERT 170 (519)
Q Consensus 91 ~gDl~~~~lgls~~~~~~~l~~~vdiViH~Aa~v~f~~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V~vSTa~v~~~~~ 170 (519)
.||+++++++++..+.. .+ +++|+||||||..++..+.....++|+.||.+++++|++. +.++|||+||..++|...
T Consensus 57 ~~Dl~~~~~~~~~~~~~-~l-~~~D~Vih~Aa~~~~~~~~~~~~~~nv~gt~~ll~~a~~~-~~~~~v~~SS~~v~g~~~ 133 (657)
T PRK07201 57 VGDLTEPGLGLSEADIA-EL-GDIDHVVHLAAIYDLTADEEAQRAANVDGTRNVVELAERL-QAATFHHVSSIAVAGDYE 133 (657)
T ss_pred ecccCCccCCcCHHHHH-Hh-cCCCEEEECceeecCCCCHHHHHHHHhHHHHHHHHHHHhc-CCCeEEEEeccccccCcc
Confidence 99999999888766653 55 8899999999998887777888999999999999999986 789999999999998654
Q ss_pred CeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcHHHHHHHHHHHHHHHhhcCCc
Q 010075 171 GLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLMQQSKENLS 250 (519)
Q Consensus 171 ~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~Y~~sK~~aE~lv~~~~~~lp 250 (519)
+..+|...++ ...+.+.|+.||+.+|+++.+. .+++
T Consensus 134 ~~~~e~~~~~-------------------------------------------~~~~~~~Y~~sK~~~E~~~~~~-~g~~ 169 (657)
T PRK07201 134 GVFREDDFDE-------------------------------------------GQGLPTPYHRTKFEAEKLVREE-CGLP 169 (657)
T ss_pred Cccccccchh-------------------------------------------hcCCCCchHHHHHHHHHHHHHc-CCCc
Confidence 3333322110 0134678999999999999863 5899
Q ss_pred EEEEecCccccCCCCCCCcccccccccH---HHHHHhhc-CCceeeccCCCceeeeeeHHHHHHHHHHHHHHhccCCCCC
Q 010075 251 LVIIRPTVVSGTYKEPFPGWVEDLKTIN---TLFVASAQ-GNLRCLVGETKVIMDVIPVDMVVNAMIVAMVAHAKQPSDA 326 (519)
Q Consensus 251 ~~IvRPs~V~g~~~~p~~gw~~~~~~~~---~~i~~~~~-g~~~~~~~~~~~~~d~vpVDdva~aii~a~~~~~~~~~~~ 326 (519)
++|+||+.|||+... |..++..+.. .++..... .....+.+.+....+++||||++++++.++.... ..+
T Consensus 170 ~~ilRp~~v~G~~~~---g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~vddva~ai~~~~~~~~---~~g 243 (657)
T PRK07201 170 WRVYRPAVVVGDSRT---GEMDKIDGPYYFFKVLAKLAKLPSWLPMVGPDGGRTNIVPVDYVADALDHLMHKDG---RDG 243 (657)
T ss_pred EEEEcCCeeeecCCC---CccccCCcHHHHHHHHHHhccCCcccccccCCCCeeeeeeHHHHHHHHHHHhcCcC---CCC
Confidence 999999999998652 2222222221 22222211 1112334556678899999999999998875321 236
Q ss_pred cEEEecCCCCCchhHHHHHHHHH------------HHHHHHHHHHhhhhHHHHHHH----HH---HhcccccccceEEec
Q 010075 327 NIYHVGSSLRNPVTLGLQVANTV------------FHNFFKGVYNDLRKKVKFVMR----VV---EIYKPYFYFNGIFDD 387 (519)
Q Consensus 327 ~iyni~s~~~~~i~~~~~~~~~~------------~p~~~~~~~~~~~~~~~~~~~----~~---~~~~~f~~~~w~F~~ 387 (519)
++||++++...++..++..+... +|..+.............+.. .. ...-.+....+.|++
T Consensus 244 ~~~ni~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~f~~ 323 (657)
T PRK07201 244 QTFHLTDPKPQRVGDIYNAFARAAGAPPDARLFGFLPGFVAAPLLAALGPVRRLRNAVATQLGIPPEVLDFVNYPTTFDS 323 (657)
T ss_pred CEEEeCCCCCCcHHHHHHHHHHHhCCCccccccccCChHHHHHHhhhcchhhHHHHHHHHhcCCCHHHHHhccCCCeecc
Confidence 79999998665554444443332 222222222221111111111 00 011124566789999
Q ss_pred hhHHHHHHHhcCCC
Q 010075 388 TNTEKLRMTARGSR 401 (519)
Q Consensus 388 ~n~~~L~~~l~~~D 401 (519)
+++++.+.....+.
T Consensus 324 ~~~~~~L~~~~~~~ 337 (657)
T PRK07201 324 RETRAALKGSGIEV 337 (657)
T ss_pred HHHHHHhccCCcCC
Confidence 99999887655443
|
|
| >PLN02166 dTDP-glucose 4,6-dehydratase | Back alignment and domain information |
|---|
Probab=99.96 E-value=3.5e-28 Score=256.65 Aligned_cols=248 Identities=15% Similarity=0.158 Sum_probs=179.9
Q ss_pred CCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEE
Q 010075 11 ENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFV 90 (519)
Q Consensus 11 ~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v 90 (519)
+.|+|||||||||||++|++.|++.| .+|+++.|...+. .+.+. .+ . ...+++++
T Consensus 119 ~~mkILVTGatGFIGs~Lv~~Ll~~G---~~V~~ldr~~~~~--~~~~~-~~------------~-------~~~~~~~~ 173 (436)
T PLN02166 119 KRLRIVVTGGAGFVGSHLVDKLIGRG---DEVIVIDNFFTGR--KENLV-HL------------F-------GNPRFELI 173 (436)
T ss_pred CCCEEEEECCccHHHHHHHHHHHHCC---CEEEEEeCCCCcc--HhHhh-hh------------c-------cCCceEEE
Confidence 34899999999999999999999988 5778888764321 11111 00 0 01367888
Q ss_pred eccCCCCCCCCChhhhHHHHhcCccEEEEcCccCCc---cccHHHHHHHhHHHHHHHHHHHHhccCCceEEEEecceeec
Q 010075 91 PGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF---DERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAYVAG 167 (519)
Q Consensus 91 ~gDl~~~~lgls~~~~~~~l~~~vdiViH~Aa~v~f---~~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V~vSTa~v~~ 167 (519)
.+|+.++ . ..++|+|||+||.... ..+....+++|+.||.+++++|++. +. +|||+||.+|||
T Consensus 174 ~~Di~~~-------~-----~~~~D~ViHlAa~~~~~~~~~~p~~~~~~Nv~gT~nLleaa~~~-g~-r~V~~SS~~VYg 239 (436)
T PLN02166 174 RHDVVEP-------I-----LLEVDQIYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRV-GA-RFLLTSTSEVYG 239 (436)
T ss_pred ECccccc-------c-----ccCCCEEEECceeccchhhccCHHHHHHHHHHHHHHHHHHHHHh-CC-EEEEECcHHHhC
Confidence 9998742 1 2469999999997542 3456778999999999999999986 54 899999999998
Q ss_pred CcCC-eeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcHHHHHHHHHHHHHHHh-
Q 010075 168 ERTG-LILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLMQQS- 245 (519)
Q Consensus 168 ~~~~-~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~Y~~sK~~aE~lv~~~- 245 (519)
+..+ .++|..+.+..+ ..+.+.|+.||..+|++++.+
T Consensus 240 ~~~~~p~~E~~~~~~~p-----------------------------------------~~p~s~Yg~SK~~aE~~~~~y~ 278 (436)
T PLN02166 240 DPLEHPQKETYWGNVNP-----------------------------------------IGERSCYDEGKRTAETLAMDYH 278 (436)
T ss_pred CCCCCCCCccccccCCC-----------------------------------------CCCCCchHHHHHHHHHHHHHHH
Confidence 6432 233332111011 134578999999999999987
Q ss_pred -hcCCcEEEEecCccccCCCCCCCcccccccccHHHHHHhhcCCceeeccCCCceeeeeeHHHHHHHHHHHHHHhccCCC
Q 010075 246 -KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMIVAMVAHAKQPS 324 (519)
Q Consensus 246 -~~~lp~~IvRPs~V~g~~~~p~~gw~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~d~vpVDdva~aii~a~~~~~~~~~ 324 (519)
..+++++++||++|||+...+..+ ..+..++..+..|....+++++++.+|||||+|+|++++.++...
T Consensus 279 ~~~~l~~~ilR~~~vYGp~~~~~~~-----~~i~~~i~~~l~~~~i~v~g~g~~~rdfi~V~Dva~ai~~~~~~~----- 348 (436)
T PLN02166 279 RGAGVEVRIARIFNTYGPRMCLDDG-----RVVSNFVAQTIRKQPMTVYGDGKQTRSFQYVSDLVDGLVALMEGE----- 348 (436)
T ss_pred HHhCCCeEEEEEccccCCCCCCCcc-----chHHHHHHHHhcCCCcEEeCCCCeEEeeEEHHHHHHHHHHHHhcC-----
Confidence 458999999999999987532111 223456667777777778899999999999999999999888532
Q ss_pred CCcEEEecCCCCCchhHHHHHHHH
Q 010075 325 DANIYHVGSSLRNPVTLGLQVANT 348 (519)
Q Consensus 325 ~~~iyni~s~~~~~i~~~~~~~~~ 348 (519)
...+||++++...++..+...+..
T Consensus 349 ~~giyNIgs~~~~Si~ela~~I~~ 372 (436)
T PLN02166 349 HVGPFNLGNPGEFTMLELAEVVKE 372 (436)
T ss_pred CCceEEeCCCCcEeHHHHHHHHHH
Confidence 135999999877665555555443
|
|
| >PRK11908 NAD-dependent epimerase/dehydratase family protein; Provisional | Back alignment and domain information |
|---|
Probab=99.96 E-value=7.4e-28 Score=248.08 Aligned_cols=259 Identities=18% Similarity=0.204 Sum_probs=180.9
Q ss_pred CEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEEec
Q 010075 13 KTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVPG 92 (519)
Q Consensus 13 k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v~g 92 (519)
|+|||||||||||++|+++|++.+ + .+|+++.|+.... .++. ...+++++.+
T Consensus 2 ~~ilVtGatGfiGs~l~~~L~~~~-~-~~V~~~~r~~~~~---~~~~-----------------------~~~~~~~~~~ 53 (347)
T PRK11908 2 KKVLILGVNGFIGHHLSKRILETT-D-WEVYGMDMQTDRL---GDLV-----------------------NHPRMHFFEG 53 (347)
T ss_pred cEEEEECCCcHHHHHHHHHHHhCC-C-CeEEEEeCcHHHH---HHhc-----------------------cCCCeEEEeC
Confidence 689999999999999999999863 1 5788988854211 1110 0246889999
Q ss_pred cCCCCCCCCChhhhHHHHhcCccEEEEcCccCC---ccccHHHHHHHhHHHHHHHHHHHHhccCCceEEEEecceeecCc
Q 010075 93 DISSEDLGLKDSNLKEELWNELDIMVNSAAITK---FDERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAYVAGER 169 (519)
Q Consensus 93 Dl~~~~lgls~~~~~~~l~~~vdiViH~Aa~v~---f~~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V~vSTa~v~~~~ 169 (519)
|+++ +.+....+.+++|+|||+||... ...+....+++|+.|+.+++++|++. + ++|||+||+.+||..
T Consensus 54 Dl~~------~~~~~~~~~~~~d~ViH~aa~~~~~~~~~~p~~~~~~n~~~~~~ll~aa~~~-~-~~~v~~SS~~vyg~~ 125 (347)
T PRK11908 54 DITI------NKEWIEYHVKKCDVILPLVAIATPATYVKQPLRVFELDFEANLPIVRSAVKY-G-KHLVFPSTSEVYGMC 125 (347)
T ss_pred CCCC------CHHHHHHHHcCCCEEEECcccCChHHhhcCcHHHHHHHHHHHHHHHHHHHhc-C-CeEEEEecceeeccC
Confidence 9974 22233466778999999999743 23456677899999999999999986 5 799999999999864
Q ss_pred CC-eeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcHHHHHHHHHHHHHHHh--h
Q 010075 170 TG-LILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLMQQS--K 246 (519)
Q Consensus 170 ~~-~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~Y~~sK~~aE~lv~~~--~ 246 (519)
.+ .+.|+. ++++. . ....+.+.|+.||.++|++++.+ .
T Consensus 126 ~~~~~~ee~----~~~~~---------------------------------~--~~~~p~~~Y~~sK~~~e~~~~~~~~~ 166 (347)
T PRK11908 126 PDEEFDPEA----SPLVY---------------------------------G--PINKPRWIYACSKQLMDRVIWAYGME 166 (347)
T ss_pred CCcCcCccc----ccccc---------------------------------C--cCCCccchHHHHHHHHHHHHHHHHHH
Confidence 32 122211 11100 0 01134568999999999999887 4
Q ss_pred cCCcEEEEecCccccCCCCCCCccccc-ccccHHHHHHhhcCCceeeccCCCceeeeeeHHHHHHHHHHHHHHhccCCCC
Q 010075 247 ENLSLVIIRPTVVSGTYKEPFPGWVED-LKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMIVAMVAHAKQPSD 325 (519)
Q Consensus 247 ~~lp~~IvRPs~V~g~~~~p~~gw~~~-~~~~~~~i~~~~~g~~~~~~~~~~~~~d~vpVDdva~aii~a~~~~~~~~~~ 325 (519)
.+++++++||+.|||+...+...-... ...+..++..+..|....+.+++++.+|+|||+|+|++++.++..... ...
T Consensus 167 ~~~~~~ilR~~~v~Gp~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~g~~~r~~i~v~D~a~a~~~~~~~~~~-~~~ 245 (347)
T PRK11908 167 EGLNFTLFRPFNWIGPGLDSIYTPKEGSSRVVTQFLGHIVRGEPISLVDGGSQKRAFTDIDDGIDALMKIIENKDG-VAS 245 (347)
T ss_pred cCCCeEEEeeeeeeCCCccCCCccccCCcchHHHHHHHHhCCCceEEecCCceeeccccHHHHHHHHHHHHhCccc-cCC
Confidence 689999999999999986442110000 122345566666777666778889999999999999999998874321 112
Q ss_pred CcEEEecCCC-CCchhHHHHHHH
Q 010075 326 ANIYHVGSSL-RNPVTLGLQVAN 347 (519)
Q Consensus 326 ~~iyni~s~~-~~~i~~~~~~~~ 347 (519)
+++||++++. ..++..+...+.
T Consensus 246 g~~yni~~~~~~~s~~e~~~~i~ 268 (347)
T PRK11908 246 GKIYNIGNPKNNHSVRELANKML 268 (347)
T ss_pred CCeEEeCCCCCCcCHHHHHHHHH
Confidence 5799999863 455555555443
|
|
| >PRK10217 dTDP-glucose 4,6-dehydratase; Provisional | Back alignment and domain information |
|---|
Probab=99.96 E-value=7.3e-28 Score=248.78 Aligned_cols=251 Identities=18% Similarity=0.222 Sum_probs=175.9
Q ss_pred CEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEEec
Q 010075 13 KTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVPG 92 (519)
Q Consensus 13 k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v~g 92 (519)
++|||||||||||++|+++|++.|.+ ++++.+..........+. .. ....++.++.+
T Consensus 2 ~~vlVtGatGfIG~~l~~~L~~~g~~---~v~~~~~~~~~~~~~~~~-------------~~-------~~~~~~~~~~~ 58 (355)
T PRK10217 2 RKILITGGAGFIGSALVRYIINETSD---AVVVVDKLTYAGNLMSLA-------------PV-------AQSERFAFEKV 58 (355)
T ss_pred cEEEEEcCCcHHHHHHHHHHHHcCCC---EEEEEecCccccchhhhh-------------hc-------ccCCceEEEEC
Confidence 68999999999999999999998843 333444322111111111 00 00246788999
Q ss_pred cCCCCCCCCChhhhHHHHhc--CccEEEEcCccCCcc---ccHHHHHHHhHHHHHHHHHHHHhc--------cCCceEEE
Q 010075 93 DISSEDLGLKDSNLKEELWN--ELDIMVNSAAITKFD---ERYDVAFGINTLGVIHLVNFAKKC--------VKLKVFVH 159 (519)
Q Consensus 93 Dl~~~~lgls~~~~~~~l~~--~vdiViH~Aa~v~f~---~~~~~~~~~Nv~gt~~ll~~a~~~--------~~l~~~V~ 159 (519)
|++++ +..+.+++ ++|+|||+||..... +..+..+++|+.||.+++++|++. +++++|||
T Consensus 59 Dl~d~-------~~~~~~~~~~~~D~Vih~A~~~~~~~~~~~~~~~~~~N~~gt~~ll~a~~~~~~~~~~~~~~~~~~i~ 131 (355)
T PRK10217 59 DICDR-------AELARVFTEHQPDCVMHLAAESHVDRSIDGPAAFIETNIVGTYTLLEAARAYWNALTEDKKSAFRFHH 131 (355)
T ss_pred CCcCh-------HHHHHHHhhcCCCEEEECCcccCcchhhhChHHHHHHhhHHHHHHHHHHHHhhhcccccccCceEEEE
Confidence 99953 33345555 499999999986543 356788999999999999999863 35689999
Q ss_pred EecceeecCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcHHHHHHHHHH
Q 010075 160 VSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGE 239 (519)
Q Consensus 160 vSTa~v~~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~Y~~sK~~aE 239 (519)
+||..+|+...+. ..+.+|+.+ ..+.+.|+.||..+|
T Consensus 132 ~SS~~vyg~~~~~--~~~~~E~~~-----------------------------------------~~p~s~Y~~sK~~~e 168 (355)
T PRK10217 132 ISTDEVYGDLHST--DDFFTETTP-----------------------------------------YAPSSPYSASKASSD 168 (355)
T ss_pred ecchhhcCCCCCC--CCCcCCCCC-----------------------------------------CCCCChhHHHHHHHH
Confidence 9999999853210 111221111 134578999999999
Q ss_pred HHHHHh--hcCCcEEEEecCccccCCCCCCCcccccccccHHHHHHhhcCCceeeccCCCceeeeeeHHHHHHHHHHHHH
Q 010075 240 MLMQQS--KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMIVAMV 317 (519)
Q Consensus 240 ~lv~~~--~~~lp~~IvRPs~V~g~~~~p~~gw~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~d~vpVDdva~aii~a~~ 317 (519)
.++..+ ..+++++++||+.|||+...+- .....++.....|....+++++++.+|++||||+|++++.++.
T Consensus 169 ~~~~~~~~~~~~~~~i~r~~~v~Gp~~~~~-------~~~~~~~~~~~~~~~~~~~g~g~~~~~~i~v~D~a~a~~~~~~ 241 (355)
T PRK10217 169 HLVRAWLRTYGLPTLITNCSNNYGPYHFPE-------KLIPLMILNALAGKPLPVYGNGQQIRDWLYVEDHARALYCVAT 241 (355)
T ss_pred HHHHHHHHHhCCCeEEEeeeeeeCCCCCcc-------cHHHHHHHHHhcCCCceEeCCCCeeeCcCcHHHHHHHHHHHHh
Confidence 999876 4689999999999999876321 1233455566667656677899999999999999999999886
Q ss_pred HhccCCCCCcEEEecCCCCCchhHHHHHHH
Q 010075 318 AHAKQPSDANIYHVGSSLRNPVTLGLQVAN 347 (519)
Q Consensus 318 ~~~~~~~~~~iyni~s~~~~~i~~~~~~~~ 347 (519)
.. . .+++||++++...++..++..+.
T Consensus 242 ~~--~--~~~~yni~~~~~~s~~~~~~~i~ 267 (355)
T PRK10217 242 TG--K--VGETYNIGGHNERKNLDVVETIC 267 (355)
T ss_pred cC--C--CCCeEEeCCCCcccHHHHHHHHH
Confidence 42 1 25799999997655444444443
|
|
| >PLN02206 UDP-glucuronate decarboxylase | Back alignment and domain information |
|---|
Probab=99.96 E-value=9.1e-28 Score=253.91 Aligned_cols=247 Identities=15% Similarity=0.176 Sum_probs=177.3
Q ss_pred CCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEE
Q 010075 11 ENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFV 90 (519)
Q Consensus 11 ~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v 90 (519)
++|+|||||||||||++|++.|++.| .+|+++.|..... .+++.. . ....+++++
T Consensus 118 ~~~kILVTGatGfIGs~Lv~~Ll~~G---~~V~~ld~~~~~~--~~~~~~-------------~-------~~~~~~~~i 172 (442)
T PLN02206 118 KGLRVVVTGGAGFVGSHLVDRLMARG---DSVIVVDNFFTGR--KENVMH-------------H-------FSNPNFELI 172 (442)
T ss_pred CCCEEEEECcccHHHHHHHHHHHHCc---CEEEEEeCCCccc--hhhhhh-------------h-------ccCCceEEE
Confidence 57999999999999999999999998 5678887653221 111110 0 012467889
Q ss_pred eccCCCCCCCCChhhhHHHHhcCccEEEEcCccCC---ccccHHHHHHHhHHHHHHHHHHHHhccCCceEEEEecceeec
Q 010075 91 PGDISSEDLGLKDSNLKEELWNELDIMVNSAAITK---FDERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAYVAG 167 (519)
Q Consensus 91 ~gDl~~~~lgls~~~~~~~l~~~vdiViH~Aa~v~---f~~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V~vSTa~v~~ 167 (519)
.+|+.++ ...++|+|||+||... ...+....+++|+.||.+++++|++. +. +|||+||..+|+
T Consensus 173 ~~D~~~~------------~l~~~D~ViHlAa~~~~~~~~~~p~~~~~~Nv~gt~nLleaa~~~-g~-r~V~~SS~~VYg 238 (442)
T PLN02206 173 RHDVVEP------------ILLEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRV-GA-RFLLTSTSEVYG 238 (442)
T ss_pred ECCccCh------------hhcCCCEEEEeeeecchhhhhcCHHHHHHHHHHHHHHHHHHHHHh-CC-EEEEECChHHhC
Confidence 9998742 1246999999999754 23456778999999999999999986 54 899999999998
Q ss_pred CcCC-eeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcHHHHHHHHHHHHHHHh-
Q 010075 168 ERTG-LILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLMQQS- 245 (519)
Q Consensus 168 ~~~~-~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~Y~~sK~~aE~lv~~~- 245 (519)
.... ..+|..+.+..+ ..+.+.|+.||..+|.++..+
T Consensus 239 ~~~~~p~~E~~~~~~~P-----------------------------------------~~~~s~Y~~SK~~aE~~~~~y~ 277 (442)
T PLN02206 239 DPLQHPQVETYWGNVNP-----------------------------------------IGVRSCYDEGKRTAETLTMDYH 277 (442)
T ss_pred CCCCCCCCccccccCCC-----------------------------------------CCccchHHHHHHHHHHHHHHHH
Confidence 6432 223332111001 133578999999999999876
Q ss_pred -hcCCcEEEEecCccccCCCCCCCcccccccccHHHHHHhhcCCceeeccCCCceeeeeeHHHHHHHHHHHHHHhccCCC
Q 010075 246 -KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMIVAMVAHAKQPS 324 (519)
Q Consensus 246 -~~~lp~~IvRPs~V~g~~~~p~~gw~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~d~vpVDdva~aii~a~~~~~~~~~ 324 (519)
..+++++++||+.|||+......+ .....++..+..+....+++++++.+|++||+|+|++++.++... .
T Consensus 278 ~~~g~~~~ilR~~~vyGp~~~~~~~-----~~v~~~i~~~l~~~~i~i~g~G~~~rdfi~V~Dva~ai~~a~e~~---~- 348 (442)
T PLN02206 278 RGANVEVRIARIFNTYGPRMCIDDG-----RVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLVEGLMRLMEGE---H- 348 (442)
T ss_pred HHhCCCeEEEEeccccCCCCCcccc-----chHHHHHHHHHcCCCcEEeCCCCEEEeEEeHHHHHHHHHHHHhcC---C-
Confidence 458999999999999987532111 123345666666766677899999999999999999999888532 1
Q ss_pred CCcEEEecCCCCCchhHHHHHHH
Q 010075 325 DANIYHVGSSLRNPVTLGLQVAN 347 (519)
Q Consensus 325 ~~~iyni~s~~~~~i~~~~~~~~ 347 (519)
..+||++++...++..+...+.
T Consensus 349 -~g~yNIgs~~~~sl~Elae~i~ 370 (442)
T PLN02206 349 -VGPFNLGNPGEFTMLELAKVVQ 370 (442)
T ss_pred -CceEEEcCCCceeHHHHHHHHH
Confidence 3589999987666544444443
|
|
| >PLN02986 cinnamyl-alcohol dehydrogenase family protein | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.8e-27 Score=242.59 Aligned_cols=262 Identities=17% Similarity=0.172 Sum_probs=176.1
Q ss_pred CCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEE
Q 010075 11 ENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFV 90 (519)
Q Consensus 11 ~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v 90 (519)
.|++|||||||||||++++++|++.| .+|++++|+.......+.+. ...+ ...+++++
T Consensus 4 ~~~~vlVTGatG~iG~~l~~~L~~~g---~~V~~~~r~~~~~~~~~~~~-------------~~~~------~~~~~~~~ 61 (322)
T PLN02986 4 GGKLVCVTGASGYIASWIVKLLLLRG---YTVKATVRDLTDRKKTEHLL-------------ALDG------AKERLKLF 61 (322)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCC---CEEEEEECCCcchHHHHHHH-------------hccC------CCCceEEE
Confidence 47899999999999999999999988 57888999765432111111 0000 12468899
Q ss_pred eccCCCCCCCCChhhhHHHHhcCccEEEEcCccCCcc--ccHHHHHHHhHHHHHHHHHHHHhccCCceEEEEecceeecC
Q 010075 91 PGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKFD--ERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAYVAGE 168 (519)
Q Consensus 91 ~gDl~~~~lgls~~~~~~~l~~~vdiViH~Aa~v~f~--~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V~vSTa~v~~~ 168 (519)
.+|++++ +....+++++|+|||+||.+... ++....+++|+.|+.+++++|++.+++++|||+||..++..
T Consensus 62 ~~Dl~~~-------~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~nv~gt~~ll~~~~~~~~v~rvV~~SS~~~~~~ 134 (322)
T PLN02986 62 KADLLEE-------SSFEQAIEGCDAVFHTASPVFFTVKDPQTELIDPALKGTINVLNTCKETPSVKRVILTSSTAAVLF 134 (322)
T ss_pred ecCCCCc-------chHHHHHhCCCEEEEeCCCcCCCCCCchhhhhHHHHHHHHHHHHHHHhcCCccEEEEecchhheec
Confidence 9999953 33457777899999999986442 34456789999999999999988657899999999875432
Q ss_pred cCCee-ecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcHHHHHHHHHHHHHHHh--
Q 010075 169 RTGLI-LENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLMQQS-- 245 (519)
Q Consensus 169 ~~~~i-~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~Y~~sK~~aE~lv~~~-- 245 (519)
..... .+..++|+.+.++.. ...+.+.|+.||.++|.+++++
T Consensus 135 ~~~~~~~~~~~~E~~~~~p~~-----------------------------------~~~~~~~Y~~sK~~aE~~~~~~~~ 179 (322)
T PLN02986 135 RQPPIEANDVVDETFFSDPSL-----------------------------------CRETKNWYPLSKILAENAAWEFAK 179 (322)
T ss_pred CCccCCCCCCcCcccCCChHH-----------------------------------hhccccchHHHHHHHHHHHHHHHH
Confidence 11011 112233222221100 0024578999999999999987
Q ss_pred hcCCcEEEEecCccccCCCCCCCcccccccccHHHHHHhhcCCceeeccCCCceeeeeeHHHHHHHHHHHHHHhccCCCC
Q 010075 246 KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMIVAMVAHAKQPSD 325 (519)
Q Consensus 246 ~~~lp~~IvRPs~V~g~~~~p~~gw~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~d~vpVDdva~aii~a~~~~~~~~~~ 325 (519)
..+++++++||+.|||+...|..+ ....++..+..|... . +...+++|||+|+|++++.++.....
T Consensus 180 ~~~~~~~~lrp~~v~Gp~~~~~~~------~~~~~~~~~~~g~~~--~--~~~~~~~v~v~Dva~a~~~al~~~~~---- 245 (322)
T PLN02986 180 DNGIDMVVLNPGFICGPLLQPTLN------FSVELIVDFINGKNL--F--NNRFYRFVDVRDVALAHIKALETPSA---- 245 (322)
T ss_pred HhCCeEEEEcccceeCCCCCCCCC------ccHHHHHHHHcCCCC--C--CCcCcceeEHHHHHHHHHHHhcCccc----
Confidence 458999999999999997654211 122344445555431 2 24568999999999999999864321
Q ss_pred CcEEEecCCCCCchhHHHHHHHHHHH
Q 010075 326 ANIYHVGSSLRNPVTLGLQVANTVFH 351 (519)
Q Consensus 326 ~~iyni~s~~~~~i~~~~~~~~~~~p 351 (519)
.++||++ +...++..+...+...+|
T Consensus 246 ~~~yni~-~~~~s~~e~~~~i~~~~~ 270 (322)
T PLN02986 246 NGRYIID-GPIMSVNDIIDILRELFP 270 (322)
T ss_pred CCcEEEe-cCCCCHHHHHHHHHHHCC
Confidence 3489994 544444445555554444
|
|
| >PRK08125 bifunctional UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose formyltransferase; Validated | Back alignment and domain information |
|---|
Probab=99.96 E-value=9.7e-28 Score=266.70 Aligned_cols=267 Identities=19% Similarity=0.209 Sum_probs=189.3
Q ss_pred hhhhcCCCEEEEeCCccHHHHHHHHHHHHh-CCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccC
Q 010075 6 VVEFLENKTILVSGVTGFVAKVFIEKILRV-QPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFIS 84 (519)
Q Consensus 6 i~~~~~~k~VlITGaTGFlG~~Lv~~LL~~-g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~ 84 (519)
-..|.++|+|||||||||||++|++.|++. + ++|+++.|..... .++. ..
T Consensus 309 ~~~~~~~~~VLVTGatGFIGs~Lv~~Ll~~~g---~~V~~l~r~~~~~---~~~~-----------------------~~ 359 (660)
T PRK08125 309 ACSAKRRTRVLILGVNGFIGNHLTERLLRDDN---YEVYGLDIGSDAI---SRFL-----------------------GH 359 (660)
T ss_pred hhhhhcCCEEEEECCCchHHHHHHHHHHhCCC---cEEEEEeCCchhh---hhhc-----------------------CC
Confidence 346778899999999999999999999985 5 5889999865321 1110 02
Q ss_pred CceEEEeccCCCCCCCCChhhhHHHHhcCccEEEEcCccCCc---cccHHHHHHHhHHHHHHHHHHHHhccCCceEEEEe
Q 010075 85 EKITFVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF---DERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVS 161 (519)
Q Consensus 85 ~~v~~v~gDl~~~~lgls~~~~~~~l~~~vdiViH~Aa~v~f---~~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V~vS 161 (519)
++++++.||++++ .+..+.+++++|+|||+||.... .......+++|+.|+.+++++|++. + ++|||+|
T Consensus 360 ~~~~~~~gDl~d~------~~~l~~~l~~~D~ViHlAa~~~~~~~~~~~~~~~~~Nv~~t~~ll~a~~~~-~-~~~V~~S 431 (660)
T PRK08125 360 PRFHFVEGDISIH------SEWIEYHIKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLKIIRYCVKY-N-KRIIFPS 431 (660)
T ss_pred CceEEEeccccCc------HHHHHHHhcCCCEEEECccccCchhhccCHHHHHHhhHHHHHHHHHHHHhc-C-CeEEEEc
Confidence 4688999999952 23334566789999999997653 3455677899999999999999996 5 7999999
Q ss_pred cceeecCcCC-eeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcHHHHHHHHHHH
Q 010075 162 TAYVAGERTG-LILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEM 240 (519)
Q Consensus 162 Ta~v~~~~~~-~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~Y~~sK~~aE~ 240 (519)
|+++||...+ .++|+. +..+ ......+.+.|+.||.++|+
T Consensus 432 S~~vyg~~~~~~~~E~~-----~~~~----------------------------------~~p~~~p~s~Yg~sK~~~E~ 472 (660)
T PRK08125 432 TSEVYGMCTDKYFDEDT-----SNLI----------------------------------VGPINKQRWIYSVSKQLLDR 472 (660)
T ss_pred chhhcCCCCCCCcCccc-----cccc----------------------------------cCCCCCCccchHHHHHHHHH
Confidence 9999986432 233331 1100 00001234679999999999
Q ss_pred HHHHh--hcCCcEEEEecCccccCCCCCCCcccc-cccccHHHHHHhhcCCceeeccCCCceeeeeeHHHHHHHHHHHHH
Q 010075 241 LMQQS--KENLSLVIIRPTVVSGTYKEPFPGWVE-DLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMIVAMV 317 (519)
Q Consensus 241 lv~~~--~~~lp~~IvRPs~V~g~~~~p~~gw~~-~~~~~~~~i~~~~~g~~~~~~~~~~~~~d~vpVDdva~aii~a~~ 317 (519)
++..+ ..+++++++||++|||+.......... .......++..+..|....+.+++++.+|+|||+|+|++++.++.
T Consensus 473 ~~~~~~~~~g~~~~ilR~~~vyGp~~~~~~~~~~~~~~~i~~~i~~~~~~~~i~~~g~g~~~rd~i~v~Dva~a~~~~l~ 552 (660)
T PRK08125 473 VIWAYGEKEGLRFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLVDGGKQKRCFTDIRDGIEALFRIIE 552 (660)
T ss_pred HHHHHHHhcCCceEEEEEceeeCCCccccccccccccchHHHHHHHhcCCCCeEEeCCCceeeceeeHHHHHHHHHHHHh
Confidence 99887 458999999999999997643211100 012244556666667766777899999999999999999999986
Q ss_pred HhccCCCCCcEEEecCCC-CCchhHHHHHHHHH
Q 010075 318 AHAKQPSDANIYHVGSSL-RNPVTLGLQVANTV 349 (519)
Q Consensus 318 ~~~~~~~~~~iyni~s~~-~~~i~~~~~~~~~~ 349 (519)
+.... ..+++||++++. ..++..++..+...
T Consensus 553 ~~~~~-~~g~iyni~~~~~~~s~~el~~~i~~~ 584 (660)
T PRK08125 553 NKDNR-CDGQIINIGNPDNEASIRELAEMLLAS 584 (660)
T ss_pred ccccc-cCCeEEEcCCCCCceeHHHHHHHHHHH
Confidence 43211 125799999985 56666655555443
|
|
| >TIGR01746 Thioester-redct thioester reductase domain | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.5e-27 Score=246.13 Aligned_cols=274 Identities=23% Similarity=0.336 Sum_probs=189.4
Q ss_pred EEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEEecc
Q 010075 14 TILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVPGD 93 (519)
Q Consensus 14 ~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v~gD 93 (519)
+|||||||||||++|++.|++.|+. .+|++++|+.......+|+.+.+-...+ .. ......+++++.||
T Consensus 1 ~vlvtGatG~lG~~l~~~L~~~g~~-~~V~~l~R~~~~~~~~~~l~~~~~~~~~---------~~-~~~~~~~v~~~~~D 69 (367)
T TIGR01746 1 TVLLTGATGFLGAYLLEELLRRSTQ-AKVICLVRAASEEHAMERLREALRSYRL---------WQ-EDLARERIEVVAGD 69 (367)
T ss_pred CEEEeccchHHHHHHHHHHHhCCCC-CEEEEEEccCCHHHHHHHHHHHHHHhCC---------CC-chhhhCCEEEEeCC
Confidence 5899999999999999999998754 4899999988765555666532111000 00 00001579999999
Q ss_pred CCCCCCCCChhhhHHHHhcCccEEEEcCccCCccccHHHHHHHhHHHHHHHHHHHHhccCCceEEEEecceeecCcCCee
Q 010075 94 ISSEDLGLKDSNLKEELWNELDIMVNSAAITKFDERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAYVAGERTGLI 173 (519)
Q Consensus 94 l~~~~lgls~~~~~~~l~~~vdiViH~Aa~v~f~~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V~vSTa~v~~~~~~~i 173 (519)
++++.+|+++.+.. .+.+++|+|||+||.+.+..+++...++|+.|+.+++++|.+. +.++|||+||..+++.....
T Consensus 70 ~~~~~~gl~~~~~~-~~~~~~d~vih~a~~~~~~~~~~~~~~~nv~g~~~ll~~a~~~-~~~~~v~iSS~~v~~~~~~~- 146 (367)
T TIGR01746 70 LSEPRLGLSDAEWE-RLAENVDTIVHNGALVNWVYPYSELRAANVLGTREVLRLAASG-RAKPLHYVSTISVLAAIDLS- 146 (367)
T ss_pred cCcccCCcCHHHHH-HHHhhCCEEEeCCcEeccCCcHHHHhhhhhHHHHHHHHHHhhC-CCceEEEEccccccCCcCCC-
Confidence 99999999877764 7778999999999999888888888999999999999999985 77889999999998753211
Q ss_pred ecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcHHHHHHHHHHHHHHHh-hcCCcEE
Q 010075 174 LENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLMQQS-KENLSLV 252 (519)
Q Consensus 174 ~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~Y~~sK~~aE~lv~~~-~~~lp~~ 252 (519)
...++.+... ....+.+.|+.||+.+|.++.++ ..+++++
T Consensus 147 ---~~~~~~~~~~------------------------------------~~~~~~~~Y~~sK~~~E~~~~~~~~~g~~~~ 187 (367)
T TIGR01746 147 ---TVTEDDAIVT------------------------------------PPPGLAGGYAQSKWVAELLVREASDRGLPVT 187 (367)
T ss_pred ---Cccccccccc------------------------------------cccccCCChHHHHHHHHHHHHHHHhcCCCEE
Confidence 0111111000 00134578999999999999877 4489999
Q ss_pred EEecCccccCCCCCCCcccccccccHHHHHHhh-cCCceeeccCCCceeeeeeHHHHHHHHHHHHHHhccCCCCCcEEEe
Q 010075 253 IIRPTVVSGTYKEPFPGWVEDLKTINTLFVASA-QGNLRCLVGETKVIMDVIPVDMVVNAMIVAMVAHAKQPSDANIYHV 331 (519)
Q Consensus 253 IvRPs~V~g~~~~p~~gw~~~~~~~~~~i~~~~-~g~~~~~~~~~~~~~d~vpVDdva~aii~a~~~~~~~~~~~~iyni 331 (519)
++||+.|+|+.. .|..........++.... .|. ++.......+++||||+|++++.++...... ..+++||+
T Consensus 188 i~Rpg~v~G~~~---~g~~~~~~~~~~~~~~~~~~~~---~p~~~~~~~~~~~vddva~ai~~~~~~~~~~-~~~~~~~v 260 (367)
T TIGR01746 188 IVRPGRILGNSY---TGAINSSDILWRMVKGCLALGA---YPDSPELTEDLTPVDYVARAIVALSSQPAAS-AGGPVFHV 260 (367)
T ss_pred EECCCceeecCC---CCCCCchhHHHHHHHHHHHhCC---CCCCCccccCcccHHHHHHHHHHHHhCCCcc-cCCceEEe
Confidence 999999999743 222111122222333222 221 2222224678999999999999988643211 11579999
Q ss_pred cCCCCCchhHHHHHHH
Q 010075 332 GSSLRNPVTLGLQVAN 347 (519)
Q Consensus 332 ~s~~~~~i~~~~~~~~ 347 (519)
+++...++..++..+.
T Consensus 261 ~~~~~~s~~e~~~~i~ 276 (367)
T TIGR01746 261 VNPEPVSLDEFLEWLE 276 (367)
T ss_pred cCCCCCCHHHHHHHHH
Confidence 9985555444554443
|
It has been suggested that a NADP-binding motif can be found in the N-terminal portion of this domain that may form a Rossman-type fold. |
| >PLN00198 anthocyanidin reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.5e-27 Score=243.21 Aligned_cols=259 Identities=18% Similarity=0.175 Sum_probs=170.6
Q ss_pred cCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 010075 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (519)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (519)
+++++|||||||||||++|++.|++.| .+|++++|..........+. . +.. ..++++
T Consensus 7 ~~~~~vlItG~~GfIG~~l~~~L~~~g---~~V~~~~r~~~~~~~~~~~~--------------~----~~~--~~~~~~ 63 (338)
T PLN00198 7 TGKKTACVIGGTGFLASLLIKLLLQKG---YAVNTTVRDPENQKKIAHLR--------------A----LQE--LGDLKI 63 (338)
T ss_pred CCCCeEEEECCchHHHHHHHHHHHHCC---CEEEEEECCCCCHHHHHHHH--------------h----cCC--CCceEE
Confidence 458999999999999999999999988 57888888754321111110 0 000 135889
Q ss_pred EeccCCCCCCCCChhhhHHHHhcCccEEEEcCccCCcc--ccHHHHHHHhHHHHHHHHHHHHhccCCceEEEEecceeec
Q 010075 90 VPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKFD--ERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAYVAG 167 (519)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~~~vdiViH~Aa~v~f~--~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V~vSTa~v~~ 167 (519)
+.+|+++ .+....+++++|+|||+||...+. ++....+++|+.|+.+++++|.+..++++|||+||+.+|+
T Consensus 64 ~~~Dl~d-------~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~nv~g~~~ll~a~~~~~~~~~~v~~SS~~~~g 136 (338)
T PLN00198 64 FGADLTD-------EESFEAPIAGCDLVFHVATPVNFASEDPENDMIKPAIQGVHNVLKACAKAKSVKRVILTSSAAAVS 136 (338)
T ss_pred EEcCCCC-------hHHHHHHHhcCCEEEEeCCCCccCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEeecceeee
Confidence 9999995 333446777899999999976543 3344567999999999999998865688999999999997
Q ss_pred CcC-----CeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcHHHHHHHHHHHHH
Q 010075 168 ERT-----GLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLM 242 (519)
Q Consensus 168 ~~~-----~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~Y~~sK~~aE~lv 242 (519)
... ..++|+... .. .. +. ....+.+.|+.||.++|.++
T Consensus 137 ~~~~~~~~~~~~E~~~~-----~~-~~--------------------~~-----------~~~~p~~~Y~~sK~~~E~~~ 179 (338)
T PLN00198 137 INKLSGTGLVMNEKNWT-----DV-EF--------------------LT-----------SEKPPTWGYPASKTLAEKAA 179 (338)
T ss_pred ccCCCCCCceeccccCC-----ch-hh--------------------hh-----------hcCCccchhHHHHHHHHHHH
Confidence 431 123333211 00 00 00 00134567999999999999
Q ss_pred HHh--hcCCcEEEEecCccccCCCCCCCcccccccccHHHHHHhhcCCceeecc-CC----CceeeeeeHHHHHHHHHHH
Q 010075 243 QQS--KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVG-ET----KVIMDVIPVDMVVNAMIVA 315 (519)
Q Consensus 243 ~~~--~~~lp~~IvRPs~V~g~~~~p~~gw~~~~~~~~~~i~~~~~g~~~~~~~-~~----~~~~d~vpVDdva~aii~a 315 (519)
+.+ ..+++++++||+.|||+...+. . .....++..+..|....+.+ ++ +..+|||||||+|++++.+
T Consensus 180 ~~~~~~~~~~~~~~R~~~vyGp~~~~~---~---~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~V~D~a~a~~~~ 253 (338)
T PLN00198 180 WKFAEENNIDLITVIPTLMAGPSLTSD---I---PSSLSLAMSLITGNEFLINGLKGMQMLSGSISITHVEDVCRAHIFL 253 (338)
T ss_pred HHHHHhcCceEEEEeCCceECCCccCC---C---CCcHHHHHHHHcCCccccccccccccccCCcceeEHHHHHHHHHHH
Confidence 987 3589999999999999976321 1 11112233444454333333 22 2247999999999999998
Q ss_pred HHHhccCCCCCcEEEecCCCCCchhHHHHHH
Q 010075 316 MVAHAKQPSDANIYHVGSSLRNPVTLGLQVA 346 (519)
Q Consensus 316 ~~~~~~~~~~~~iyni~s~~~~~i~~~~~~~ 346 (519)
+..... .+.|+ +++...++..+...+
T Consensus 254 ~~~~~~----~~~~~-~~~~~~s~~el~~~i 279 (338)
T PLN00198 254 AEKESA----SGRYI-CCAANTSVPELAKFL 279 (338)
T ss_pred hhCcCc----CCcEE-EecCCCCHHHHHHHH
Confidence 864221 24675 455444443344433
|
|
| >PLN02695 GDP-D-mannose-3',5'-epimerase | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.5e-27 Score=246.07 Aligned_cols=250 Identities=16% Similarity=0.068 Sum_probs=177.3
Q ss_pred CCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEE
Q 010075 11 ENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFV 90 (519)
Q Consensus 11 ~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v 90 (519)
++|+|||||||||||++|++.|++.| ++|+++.|........ ....+.++
T Consensus 20 ~~~~IlVtGgtGfIG~~l~~~L~~~G---~~V~~v~r~~~~~~~~---------------------------~~~~~~~~ 69 (370)
T PLN02695 20 EKLRICITGAGGFIASHIARRLKAEG---HYIIASDWKKNEHMSE---------------------------DMFCHEFH 69 (370)
T ss_pred CCCEEEEECCccHHHHHHHHHHHhCC---CEEEEEEecccccccc---------------------------ccccceEE
Confidence 56899999999999999999999988 5788888864321000 00124678
Q ss_pred eccCCCCCCCCChhhhHHHHhcCccEEEEcCccCC---c-cccHHHHHHHhHHHHHHHHHHHHhccCCceEEEEecceee
Q 010075 91 PGDISSEDLGLKDSNLKEELWNELDIMVNSAAITK---F-DERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAYVA 166 (519)
Q Consensus 91 ~gDl~~~~lgls~~~~~~~l~~~vdiViH~Aa~v~---f-~~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V~vSTa~v~ 166 (519)
.+|+++ .+....+..++|+|||+||.+. + ..........|+.|+.+++++|++. ++++|||+||..+|
T Consensus 70 ~~Dl~d-------~~~~~~~~~~~D~Vih~Aa~~~~~~~~~~~~~~~~~~N~~~t~nll~aa~~~-~vk~~V~~SS~~vY 141 (370)
T PLN02695 70 LVDLRV-------MENCLKVTKGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEAARIN-GVKRFFYASSACIY 141 (370)
T ss_pred ECCCCC-------HHHHHHHHhCCCEEEEcccccCCccccccCchhhHHHHHHHHHHHHHHHHHh-CCCEEEEeCchhhc
Confidence 999994 3333456678999999999753 2 1234456788999999999999986 78999999999999
Q ss_pred cCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcHHHHHHHHHHHHHHHh-
Q 010075 167 GERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLMQQS- 245 (519)
Q Consensus 167 ~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~Y~~sK~~aE~lv~~~- 245 (519)
+.....-++.++.|+.+ .+..+.+.|+.+|..+|+++..+
T Consensus 142 g~~~~~~~~~~~~E~~~---------------------------------------~p~~p~s~Yg~sK~~~E~~~~~~~ 182 (370)
T PLN02695 142 PEFKQLETNVSLKESDA---------------------------------------WPAEPQDAYGLEKLATEELCKHYT 182 (370)
T ss_pred CCccccCcCCCcCcccC---------------------------------------CCCCCCCHHHHHHHHHHHHHHHHH
Confidence 86432101111221110 01145678999999999999876
Q ss_pred -hcCCcEEEEecCccccCCCCCCCccccc-ccccHHHHHHhhc-CCceeeccCCCceeeeeeHHHHHHHHHHHHHHhccC
Q 010075 246 -KENLSLVIIRPTVVSGTYKEPFPGWVED-LKTINTLFVASAQ-GNLRCLVGETKVIMDVIPVDMVVNAMIVAMVAHAKQ 322 (519)
Q Consensus 246 -~~~lp~~IvRPs~V~g~~~~p~~gw~~~-~~~~~~~i~~~~~-g~~~~~~~~~~~~~d~vpVDdva~aii~a~~~~~~~ 322 (519)
..+++++++||+.|||+.... ... ...+..++..+.+ +....+++++++.+++|||+|++++++.++...
T Consensus 183 ~~~g~~~~ilR~~~vyGp~~~~----~~~~~~~~~~~~~~~~~~~~~i~~~g~g~~~r~~i~v~D~a~ai~~~~~~~--- 255 (370)
T PLN02695 183 KDFGIECRIGRFHNIYGPFGTW----KGGREKAPAAFCRKALTSTDEFEMWGDGKQTRSFTFIDECVEGVLRLTKSD--- 255 (370)
T ss_pred HHhCCCEEEEEECCccCCCCCc----cccccccHHHHHHHHHcCCCCeEEeCCCCeEEeEEeHHHHHHHHHHHHhcc---
Confidence 468999999999999986521 111 1123345554443 345567789999999999999999999876532
Q ss_pred CCCCcEEEecCCCCCchhHHHHHH
Q 010075 323 PSDANIYHVGSSLRNPVTLGLQVA 346 (519)
Q Consensus 323 ~~~~~iyni~s~~~~~i~~~~~~~ 346 (519)
..++||++++...++..+...+
T Consensus 256 --~~~~~nv~~~~~~s~~el~~~i 277 (370)
T PLN02695 256 --FREPVNIGSDEMVSMNEMAEIA 277 (370)
T ss_pred --CCCceEecCCCceeHHHHHHHH
Confidence 1468999998766655555444
|
|
| >PLN02214 cinnamoyl-CoA reductase | Back alignment and domain information |
|---|
Probab=99.96 E-value=5e-27 Score=241.41 Aligned_cols=256 Identities=18% Similarity=0.198 Sum_probs=172.3
Q ss_pred cCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 010075 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (519)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (519)
.++|+|||||||||||++|++.|++.| .+|.+++|+...... ..+. . +. + ...++++
T Consensus 8 ~~~~~vlVTGatGfIG~~l~~~L~~~G---~~V~~~~r~~~~~~~-~~~~-~---------~~---~------~~~~~~~ 64 (342)
T PLN02214 8 PAGKTVCVTGAGGYIASWIVKILLERG---YTVKGTVRNPDDPKN-THLR-E---------LE---G------GKERLIL 64 (342)
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCc---CEEEEEeCCchhhhH-HHHH-H---------hh---C------CCCcEEE
Confidence 468899999999999999999999998 678899987532111 0010 0 00 0 0146889
Q ss_pred EeccCCCCCCCCChhhhHHHHhcCccEEEEcCccCCccccHHHHHHHhHHHHHHHHHHHHhccCCceEEEEecc-eeecC
Q 010075 90 VPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKFDERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTA-YVAGE 168 (519)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~~~vdiViH~Aa~v~f~~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V~vSTa-~v~~~ 168 (519)
+.+|+++ .+....+++++|+|||+||.. .......+++|+.||.+++++|++. ++++|||+||. .+|+.
T Consensus 65 ~~~Dl~d-------~~~~~~~~~~~d~Vih~A~~~--~~~~~~~~~~nv~gt~~ll~aa~~~-~v~r~V~~SS~~avyg~ 134 (342)
T PLN02214 65 CKADLQD-------YEALKAAIDGCDGVFHTASPV--TDDPEQMVEPAVNGAKFVINAAAEA-KVKRVVITSSIGAVYMD 134 (342)
T ss_pred EecCcCC-------hHHHHHHHhcCCEEEEecCCC--CCCHHHHHHHHHHHHHHHHHHHHhc-CCCEEEEeccceeeecc
Confidence 9999995 333456778899999999975 3456778999999999999999986 78999999996 57864
Q ss_pred cCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcHHHHHHHHHHHHHHHh--h
Q 010075 169 RTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLMQQS--K 246 (519)
Q Consensus 169 ~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~Y~~sK~~aE~lv~~~--~ 246 (519)
.... .+.+++|+.+.+.+ ....+.+.|+.||..+|++++.+ .
T Consensus 135 ~~~~-~~~~~~E~~~~~~~-----------------------------------~~~~p~~~Y~~sK~~aE~~~~~~~~~ 178 (342)
T PLN02214 135 PNRD-PEAVVDESCWSDLD-----------------------------------FCKNTKNWYCYGKMVAEQAAWETAKE 178 (342)
T ss_pred CCCC-CCcccCcccCCChh-----------------------------------hccccccHHHHHHHHHHHHHHHHHHH
Confidence 3210 00112222211100 00135678999999999999887 4
Q ss_pred cCCcEEEEecCccccCCCCCCCcccccccccHHHHHHhhcCCceeeccCCCceeeeeeHHHHHHHHHHHHHHhccCCCCC
Q 010075 247 ENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMIVAMVAHAKQPSDA 326 (519)
Q Consensus 247 ~~lp~~IvRPs~V~g~~~~p~~gw~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~d~vpVDdva~aii~a~~~~~~~~~~~ 326 (519)
.+++++++||+.|||+...+. . ......+.....|.... . ++..+|||||+|||++++.++.... . +
T Consensus 179 ~g~~~v~lRp~~vyGp~~~~~--~----~~~~~~~~~~~~g~~~~-~--~~~~~~~i~V~Dva~a~~~al~~~~--~--~ 245 (342)
T PLN02214 179 KGVDLVVLNPVLVLGPPLQPT--I----NASLYHVLKYLTGSAKT-Y--ANLTQAYVDVRDVALAHVLVYEAPS--A--S 245 (342)
T ss_pred cCCcEEEEeCCceECCCCCCC--C----CchHHHHHHHHcCCccc-C--CCCCcCeeEHHHHHHHHHHHHhCcc--c--C
Confidence 589999999999999975431 1 11111222344454332 2 3457899999999999999986432 1 3
Q ss_pred cEEEecCCCCCchhHHHHHHHH
Q 010075 327 NIYHVGSSLRNPVTLGLQVANT 348 (519)
Q Consensus 327 ~iyni~s~~~~~i~~~~~~~~~ 348 (519)
+.||++++ ..++..+...+..
T Consensus 246 g~yn~~~~-~~~~~el~~~i~~ 266 (342)
T PLN02214 246 GRYLLAES-ARHRGEVVEILAK 266 (342)
T ss_pred CcEEEecC-CCCHHHHHHHHHH
Confidence 58999864 3343334444443
|
|
| >PF01370 Epimerase: NAD dependent epimerase/dehydratase family; InterPro: IPR001509 This family of proteins utilise NAD as a cofactor | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.7e-27 Score=229.53 Aligned_cols=228 Identities=25% Similarity=0.410 Sum_probs=178.4
Q ss_pred EEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEEeccC
Q 010075 15 ILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVPGDI 94 (519)
Q Consensus 15 VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v~gDl 94 (519)
|||||||||||++++++|++.+ ..|+.+.|++........ ..++.++.+|+
T Consensus 1 IlI~GatG~iG~~l~~~l~~~g---~~v~~~~~~~~~~~~~~~--------------------------~~~~~~~~~dl 51 (236)
T PF01370_consen 1 ILITGATGFIGSALVRQLLKKG---HEVIVLSRSSNSESFEEK--------------------------KLNVEFVIGDL 51 (236)
T ss_dssp EEEETTTSHHHHHHHHHHHHTT---TEEEEEESCSTGGHHHHH--------------------------HTTEEEEESET
T ss_pred EEEEccCCHHHHHHHHHHHHcC---Cccccccccccccccccc--------------------------cceEEEEEeec
Confidence 7999999999999999999999 567888888766533211 13789999999
Q ss_pred CCCCCCCChhhhHHHHhcC--ccEEEEcCccCCc---cccHHHHHHHhHHHHHHHHHHHHhccCCceEEEEecceeecCc
Q 010075 95 SSEDLGLKDSNLKEELWNE--LDIMVNSAAITKF---DERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAYVAGER 169 (519)
Q Consensus 95 ~~~~lgls~~~~~~~l~~~--vdiViH~Aa~v~f---~~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V~vSTa~v~~~~ 169 (519)
.+ .+..+.+++. +|+|||+||.... .......++.|+.++.+++++|++. ++++||++||+.+|+..
T Consensus 52 ~~-------~~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~-~~~~~i~~sS~~~y~~~ 123 (236)
T PF01370_consen 52 TD-------KEQLEKLLEKANIDVVIHLAAFSSNPESFEDPEEIIEANVQGTRNLLEAAREA-GVKRFIFLSSASVYGDP 123 (236)
T ss_dssp TS-------HHHHHHHHHHHTESEEEEEBSSSSHHHHHHSHHHHHHHHHHHHHHHHHHHHHH-TTSEEEEEEEGGGGTSS
T ss_pred cc-------cccccccccccCceEEEEeeccccccccccccccccccccccccccccccccc-ccccccccccccccccc
Confidence 94 4444566654 6999999998642 1466777899999999999999997 67999999999999976
Q ss_pred CC-eeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcHHHHHHHHHHHHHHHh--h
Q 010075 170 TG-LILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLMQQS--K 246 (519)
Q Consensus 170 ~~-~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~Y~~sK~~aE~lv~~~--~ 246 (519)
.+ .++|. .+. .+.+.|+.+|..+|++++.+ .
T Consensus 124 ~~~~~~e~-----~~~-----------------------------------------~~~~~Y~~~K~~~e~~~~~~~~~ 157 (236)
T PF01370_consen 124 DGEPIDED-----SPI-----------------------------------------NPLSPYGASKRAAEELLRDYAKK 157 (236)
T ss_dssp SSSSBETT-----SGC-----------------------------------------CHSSHHHHHHHHHHHHHHHHHHH
T ss_pred cccccccc-----ccc-----------------------------------------ccccccccccccccccccccccc
Confidence 32 22332 211 34567999999999999987 3
Q ss_pred cCCcEEEEecCccccCCCCCCCcccccccccHHHHHHhhcCCceeeccCCCceeeeeeHHHHHHHHHHHHHHhccCCCCC
Q 010075 247 ENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMIVAMVAHAKQPSDA 326 (519)
Q Consensus 247 ~~lp~~IvRPs~V~g~~~~p~~gw~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~d~vpVDdva~aii~a~~~~~~~~~~~ 326 (519)
.+++++++||+.|||+. .+.. ........++..+.+|....+++++++.++++||+|+|++++.++.+.. ..+
T Consensus 158 ~~~~~~~~R~~~vyG~~-~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~---~~~ 230 (236)
T PF01370_consen 158 YGLRVTILRPPNVYGPG-NPNN---NSSSFLPSLIRQALKGKPIKIPGDGSQVRDFIHVDDLAEAIVAALENPK---AAG 230 (236)
T ss_dssp HTSEEEEEEESEEESTT-SSSS---STSSHHHHHHHHHHTTSSEEEESTSSCEEEEEEHHHHHHHHHHHHHHSC---TTT
T ss_pred ccccccccccccccccc-cccc---ccccccchhhHHhhcCCcccccCCCCCccceEEHHHHHHHHHHHHhCCC---CCC
Confidence 48999999999999998 1111 1113445677788889888888999999999999999999999998654 136
Q ss_pred cEEEec
Q 010075 327 NIYHVG 332 (519)
Q Consensus 327 ~iyni~ 332 (519)
++||++
T Consensus 231 ~~yNig 236 (236)
T PF01370_consen 231 GIYNIG 236 (236)
T ss_dssp EEEEES
T ss_pred CEEEeC
Confidence 899985
|
The proteins in this family use nucleotide-sugar substrates for a variety of chemical reactions []. It contains the NAD(P)- binding domain (IPR016040 from INTERPRO) which is a commonly found domain with a core Rossmann-type fold. One of the best studied of these proteins is UDP-galactose 4-epimerase which catalyses the conversion of UDP-galactose to UDP-glucose during galactose metabolism [, ].; GO: 0003824 catalytic activity, 0050662 coenzyme binding, 0044237 cellular metabolic process; PDB: 2NNL_D 3C1T_B 3BXX_C 2IOD_C 2X4G_A 2Q1W_B 3SLG_B 1R66_A 1R6D_A 1KEU_B .... |
| >PLN02662 cinnamyl-alcohol dehydrogenase family protein | Back alignment and domain information |
|---|
Probab=99.96 E-value=5.1e-27 Score=238.97 Aligned_cols=257 Identities=16% Similarity=0.134 Sum_probs=170.0
Q ss_pred CCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEE
Q 010075 11 ENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFV 90 (519)
Q Consensus 11 ~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v 90 (519)
+||+|||||||||||++|+++|++.| .+|.+++|+.........+. ... ....+++++
T Consensus 3 ~~~~ilVtGatGfIG~~l~~~L~~~g---~~V~~~~r~~~~~~~~~~~~-------------~~~------~~~~~~~~~ 60 (322)
T PLN02662 3 EGKVVCVTGASGYIASWLVKLLLQRG---YTVKATVRDPNDPKKTEHLL-------------ALD------GAKERLHLF 60 (322)
T ss_pred CCCEEEEECChHHHHHHHHHHHHHCC---CEEEEEEcCCCchhhHHHHH-------------hcc------CCCCceEEE
Confidence 47899999999999999999999998 57888898754321111111 000 012478899
Q ss_pred eccCCCCCCCCChhhhHHHHhcCccEEEEcCccCCc--cccHHHHHHHhHHHHHHHHHHHHhccCCceEEEEecce--ee
Q 010075 91 PGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF--DERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAY--VA 166 (519)
Q Consensus 91 ~gDl~~~~lgls~~~~~~~l~~~vdiViH~Aa~v~f--~~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V~vSTa~--v~ 166 (519)
.+|++++ +....+++++|+|||+||.... .++.+..+++|+.|+.+++++|++..++++|||+||+. +|
T Consensus 61 ~~Dl~~~-------~~~~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~v~~SS~~~~~y 133 (322)
T PLN02662 61 KANLLEE-------GSFDSVVDGCEGVFHTASPFYHDVTDPQAELIDPAVKGTLNVLRSCAKVPSVKRVVVTSSMAAVAY 133 (322)
T ss_pred eccccCc-------chHHHHHcCCCEEEEeCCcccCCCCChHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEccCHHHhcC
Confidence 9999963 3334777889999999997643 23334778999999999999998865788999999975 35
Q ss_pred cCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcHHHHHHHHHHHHHHHh-
Q 010075 167 GERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLMQQS- 245 (519)
Q Consensus 167 ~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~Y~~sK~~aE~lv~~~- 245 (519)
+... ...+.+.+|+.+..+.. .....+.|+.||.++|++++.+
T Consensus 134 ~~~~-~~~~~~~~E~~~~~p~~-----------------------------------~~~~~~~Y~~sK~~~E~~~~~~~ 177 (322)
T PLN02662 134 NGKP-LTPDVVVDETWFSDPAF-----------------------------------CEESKLWYVLSKTLAEEAAWKFA 177 (322)
T ss_pred CCcC-CCCCCcCCcccCCChhH-----------------------------------hhcccchHHHHHHHHHHHHHHHH
Confidence 4321 00111222222211100 0123468999999999999876
Q ss_pred -hcCCcEEEEecCccccCCCCCCCcccccccccHHHHHHhhcCCceeeccCCCceeeeeeHHHHHHHHHHHHHHhccCCC
Q 010075 246 -KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMIVAMVAHAKQPS 324 (519)
Q Consensus 246 -~~~lp~~IvRPs~V~g~~~~p~~gw~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~d~vpVDdva~aii~a~~~~~~~~~ 324 (519)
..+++++++||+.|||+...+.. ......+..+..|.. ..+...+|||||+|+|++++.++.....
T Consensus 178 ~~~~~~~~~lRp~~v~Gp~~~~~~------~~~~~~~~~~~~~~~----~~~~~~~~~i~v~Dva~a~~~~~~~~~~--- 244 (322)
T PLN02662 178 KENGIDMVTINPAMVIGPLLQPTL------NTSAEAILNLINGAQ----TFPNASYRWVDVRDVANAHIQAFEIPSA--- 244 (322)
T ss_pred HHcCCcEEEEeCCcccCCCCCCCC------CchHHHHHHHhcCCc----cCCCCCcCeEEHHHHHHHHHHHhcCcCc---
Confidence 45899999999999999764421 112233444444432 1234678999999999999998864221
Q ss_pred CCcEEEecCCCCCchhHHHHHHH
Q 010075 325 DANIYHVGSSLRNPVTLGLQVAN 347 (519)
Q Consensus 325 ~~~iyni~s~~~~~i~~~~~~~~ 347 (519)
...||++ +...++..+...+.
T Consensus 245 -~~~~~~~-g~~~s~~e~~~~i~ 265 (322)
T PLN02662 245 -SGRYCLV-ERVVHYSEVVKILH 265 (322)
T ss_pred -CCcEEEe-CCCCCHHHHHHHHH
Confidence 2468886 44444333444433
|
|
| >TIGR02622 CDP_4_6_dhtase CDP-glucose 4,6-dehydratase | Back alignment and domain information |
|---|
Probab=99.96 E-value=7.7e-27 Score=240.75 Aligned_cols=244 Identities=16% Similarity=0.169 Sum_probs=174.0
Q ss_pred hcCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceE
Q 010075 9 FLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKIT 88 (519)
Q Consensus 9 ~~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~ 88 (519)
|++||+|||||||||||+++++.|++.| .+|+++.|.........+. +. ...++.
T Consensus 1 ~~~~k~ilItGatG~IG~~l~~~L~~~G---~~V~~~~r~~~~~~~~~~~------------~~----------~~~~~~ 55 (349)
T TIGR02622 1 FWQGKKVLVTGHTGFKGSWLSLWLLELG---AEVYGYSLDPPTSPNLFEL------------LN----------LAKKIE 55 (349)
T ss_pred CcCCCEEEEECCCChhHHHHHHHHHHCC---CEEEEEeCCCccchhHHHH------------Hh----------hcCCce
Confidence 5789999999999999999999999998 5788888876432211110 00 013577
Q ss_pred EEeccCCCCCCCCChhhhHHHHhc--CccEEEEcCccCCcc---ccHHHHHHHhHHHHHHHHHHHHhccCCceEEEEecc
Q 010075 89 FVPGDISSEDLGLKDSNLKEELWN--ELDIMVNSAAITKFD---ERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTA 163 (519)
Q Consensus 89 ~v~gDl~~~~lgls~~~~~~~l~~--~vdiViH~Aa~v~f~---~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V~vSTa 163 (519)
++.+|+++ .++ ...+++ ++|+|||+||..... ++....+++|+.|+.+++++|++....++||++||+
T Consensus 56 ~~~~Dl~~------~~~-~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~N~~g~~~ll~a~~~~~~~~~iv~~SS~ 128 (349)
T TIGR02622 56 DHFGDIRD------AAK-LRKAIAEFKPEIVFHLAAQPLVRKSYADPLETFETNVMGTVNLLEAIRAIGSVKAVVNVTSD 128 (349)
T ss_pred EEEccCCC------HHH-HHHHHhhcCCCEEEECCcccccccchhCHHHHHHHhHHHHHHHHHHHHhcCCCCEEEEEech
Confidence 89999995 333 345555 479999999965332 356677899999999999999886447899999999
Q ss_pred eeecCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcHHHHHHHHHHHHHH
Q 010075 164 YVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLMQ 243 (519)
Q Consensus 164 ~v~~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~Y~~sK~~aE~lv~ 243 (519)
.+|+.... ..++.|+.+ ..+.+.|+.||..+|.+++
T Consensus 129 ~vyg~~~~---~~~~~e~~~-----------------------------------------~~p~~~Y~~sK~~~e~~~~ 164 (349)
T TIGR02622 129 KCYRNDEW---VWGYRETDP-----------------------------------------LGGHDPYSSSKACAELVIA 164 (349)
T ss_pred hhhCCCCC---CCCCccCCC-----------------------------------------CCCCCcchhHHHHHHHHHH
Confidence 99975321 011111111 1346789999999999998
Q ss_pred Hhh---------cCCcEEEEecCccccCCCCCCCcccccccccHHHHHHhhcCCceeeccCCCceeeeeeHHHHHHHHHH
Q 010075 244 QSK---------ENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMIV 314 (519)
Q Consensus 244 ~~~---------~~lp~~IvRPs~V~g~~~~p~~gw~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~d~vpVDdva~aii~ 314 (519)
.+. .+++++++||+.|||+.... + -.....++..+..|....+ +++++.+||+||||+|++++.
T Consensus 165 ~~~~~~~~~~~~~~i~~~~lR~~~vyGp~~~~-~-----~~~~~~~~~~~~~g~~~~~-~~g~~~rd~i~v~D~a~a~~~ 237 (349)
T TIGR02622 165 SYRSSFFGVANFHGIKIASARAGNVIGGGDWA-E-----DRLIPDVIRAFSSNKIVII-RNPDATRPWQHVLEPLSGYLL 237 (349)
T ss_pred HHHHHhhcccccCCCcEEEEccCcccCCCcch-h-----hhhhHHHHHHHhcCCCeEE-CCCCcccceeeHHHHHHHHHH
Confidence 752 28999999999999986411 1 1233456666666765544 578899999999999999998
Q ss_pred HHHHhccC-CCCCcEEEecCCC
Q 010075 315 AMVAHAKQ-PSDANIYHVGSSL 335 (519)
Q Consensus 315 a~~~~~~~-~~~~~iyni~s~~ 335 (519)
++.+.... ...+++||++++.
T Consensus 238 ~~~~~~~~~~~~~~~yni~s~~ 259 (349)
T TIGR02622 238 LAEKLFTGQAEFAGAWNFGPRA 259 (349)
T ss_pred HHHHHhhcCccccceeeeCCCc
Confidence 88643211 1124699999863
|
Members of this protein family are CDP-glucose 4,6-dehydratase from a variety of Gram-negative and Gram-positive bacteria. Members typically are encoded next to a gene that encodes a glucose-1-phosphate cytidylyltransferase, which produces the substrate, CDP-D-glucose, used by this enzyme to produce CDP-4-keto-6-deoxyglucose. |
| >PLN02989 cinnamyl-alcohol dehydrogenase family protein | Back alignment and domain information |
|---|
Probab=99.96 E-value=9.7e-27 Score=237.46 Aligned_cols=261 Identities=15% Similarity=0.138 Sum_probs=175.0
Q ss_pred CCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEE
Q 010075 11 ENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFV 90 (519)
Q Consensus 11 ~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v 90 (519)
.+|+|||||||||||++|+++|++.| .+|++++|+.........+. ...+ ...+++++
T Consensus 4 ~~k~vlVtG~~G~IG~~l~~~L~~~G---~~V~~~~r~~~~~~~~~~~~-------------~~~~------~~~~~~~~ 61 (325)
T PLN02989 4 GGKVVCVTGASGYIASWIVKLLLFRG---YTINATVRDPKDRKKTDHLL-------------ALDG------AKERLKLF 61 (325)
T ss_pred CCCEEEEECCchHHHHHHHHHHHHCC---CEEEEEEcCCcchhhHHHHH-------------hccC------CCCceEEE
Confidence 37899999999999999999999988 57788888754321111110 0000 12468899
Q ss_pred eccCCCCCCCCChhhhHHHHhcCccEEEEcCccCCcc---ccHHHHHHHhHHHHHHHHHHHHhccCCceEEEEecceeec
Q 010075 91 PGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKFD---ERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAYVAG 167 (519)
Q Consensus 91 ~gDl~~~~lgls~~~~~~~l~~~vdiViH~Aa~v~f~---~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V~vSTa~v~~ 167 (519)
.+|+++ .+..+.+++++|+|||+||..... +++...+++|+.|+.+++++|.+..+.++||++||..+++
T Consensus 62 ~~D~~d-------~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~n~~g~~~ll~a~~~~~~~~~iv~~SS~~~~~ 134 (325)
T PLN02989 62 KADLLD-------EGSFELAIDGCETVFHTASPVAITVKTDPQVELINPAVNGTINVLRTCTKVSSVKRVILTSSMAAVL 134 (325)
T ss_pred eCCCCC-------chHHHHHHcCCCEEEEeCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHcCCceEEEEecchhhee
Confidence 999995 333456778899999999975432 3467788999999999999998754578999999987765
Q ss_pred CcCCe-eecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcHHHHHHHHHHHHHHHh-
Q 010075 168 ERTGL-ILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLMQQS- 245 (519)
Q Consensus 168 ~~~~~-i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~Y~~sK~~aE~lv~~~- 245 (519)
..... -.+.+++|+.+.++... ..+.+.|+.||..+|++++.+
T Consensus 135 ~~~~~~~~~~~~~E~~~~~p~~~-----------------------------------~~~~~~Y~~sK~~~E~~~~~~~ 179 (325)
T PLN02989 135 APETKLGPNDVVDETFFTNPSFA-----------------------------------EERKQWYVLSKTLAEDAAWRFA 179 (325)
T ss_pred cCCccCCCCCccCcCCCCchhHh-----------------------------------cccccchHHHHHHHHHHHHHHH
Confidence 42110 01122333333322100 023467999999999999876
Q ss_pred -hcCCcEEEEecCccccCCCCCCCcccccccccHHHHHHhhcCCceeeccCCCceeeeeeHHHHHHHHHHHHHHhccCCC
Q 010075 246 -KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMIVAMVAHAKQPS 324 (519)
Q Consensus 246 -~~~lp~~IvRPs~V~g~~~~p~~gw~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~d~vpVDdva~aii~a~~~~~~~~~ 324 (519)
..+++++++||+.|||+...+..+ ....++..+..|... .+ ...++|+||+|+|++++.++.....
T Consensus 180 ~~~~~~~~ilR~~~vyGp~~~~~~~------~~~~~i~~~~~~~~~--~~--~~~r~~i~v~Dva~a~~~~l~~~~~--- 246 (325)
T PLN02989 180 KDNEIDLIVLNPGLVTGPILQPTLN------FSVAVIVELMKGKNP--FN--TTHHRFVDVRDVALAHVKALETPSA--- 246 (325)
T ss_pred HHcCCeEEEEcCCceeCCCCCCCCC------chHHHHHHHHcCCCC--CC--CcCcCeeEHHHHHHHHHHHhcCccc---
Confidence 458999999999999998654211 222344455555432 12 3457999999999999999864321
Q ss_pred CCcEEEecCCCCCchhHHHHHHHHHH
Q 010075 325 DANIYHVGSSLRNPVTLGLQVANTVF 350 (519)
Q Consensus 325 ~~~iyni~s~~~~~i~~~~~~~~~~~ 350 (519)
.++||++ +...++..+...+...+
T Consensus 247 -~~~~ni~-~~~~s~~ei~~~i~~~~ 270 (325)
T PLN02989 247 -NGRYIID-GPVVTIKDIENVLREFF 270 (325)
T ss_pred -CceEEEe-cCCCCHHHHHHHHHHHC
Confidence 3589995 54545444555554433
|
|
| >KOG0747 consensus Putative NAD+-dependent epimerases [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.4e-27 Score=226.68 Aligned_cols=243 Identities=25% Similarity=0.292 Sum_probs=183.2
Q ss_pred cCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 010075 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (519)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (519)
|..++|+||||.||||++.+..+...-|+.+.|.+.--.= ... ...+. ++.+ ..+..+
T Consensus 4 ~~~~~vlItgg~gfi~Sn~~~~~~~~~p~~~~v~idkL~~-~s~-~~~l~-~~~n-------------------~p~ykf 61 (331)
T KOG0747|consen 4 YKEKNVLITGGAGFIGSNFINYLVDKYPDYKFVNLDKLDY-CSN-LKNLE-PVRN-------------------SPNYKF 61 (331)
T ss_pred CccceEEEecCcCcchhhhhhhcccCCCCCcEEEEeeccc-ccc-cchhh-hhcc-------------------CCCceE
Confidence 4558999999999999999999999988865444322111 111 11111 1111 256789
Q ss_pred EeccCCCCCCCCChhhhHHHHh--cCccEEEEcCccCCccc---cHHHHHHHhHHHHHHHHHHHHhccCCceEEEEecce
Q 010075 90 VPGDISSEDLGLKDSNLKEELW--NELDIMVNSAAITKFDE---RYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAY 164 (519)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~--~~vdiViH~Aa~v~f~~---~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V~vSTa~ 164 (519)
+++|+.+ +.....++ +++|.|+|.||..+.+. +.-.....|+.+|..|++.++..+++++|||+||..
T Consensus 62 v~~di~~-------~~~~~~~~~~~~id~vihfaa~t~vd~s~~~~~~~~~nnil~t~~Lle~~~~sg~i~~fvhvSTde 134 (331)
T KOG0747|consen 62 VEGDIAD-------ADLVLYLFETEEIDTVIHFAAQTHVDRSFGDSFEFTKNNILSTHVLLEAVRVSGNIRRFVHVSTDE 134 (331)
T ss_pred eeccccc-------hHHHHhhhccCchhhhhhhHhhhhhhhhcCchHHHhcCCchhhhhHHHHHHhccCeeEEEEecccc
Confidence 9999995 33222333 47999999999986543 233447889999999999999999999999999999
Q ss_pred eecCcCCeeecccCC-CCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcHHHHHHHHHHHHHH
Q 010075 165 VAGERTGLILENPLD-GASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLMQ 243 (519)
Q Consensus 165 v~~~~~~~i~E~~~~-e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~Y~~sK~~aE~lv~ 243 (519)
|||+..+ .... |.+. ..|.|+|+.||++||++++
T Consensus 135 VYGds~~----~~~~~E~s~-----------------------------------------~nPtnpyAasKaAaE~~v~ 169 (331)
T KOG0747|consen 135 VYGDSDE----DAVVGEASL-----------------------------------------LNPTNPYAASKAAAEMLVR 169 (331)
T ss_pred eecCccc----ccccccccc-----------------------------------------CCCCCchHHHHHHHHHHHH
Confidence 9998653 2111 1111 2678999999999999999
Q ss_pred Hh--hcCCcEEEEecCccccCCCCCCCcccccccccHHHHHHhhcCCceeeccCCCceeeeeeHHHHHHHHHHHHHHhcc
Q 010075 244 QS--KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMIVAMVAHAK 321 (519)
Q Consensus 244 ~~--~~~lp~~IvRPs~V~g~~~~p~~gw~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~d~vpVDdva~aii~a~~~~~~ 321 (519)
.+ ..++|++++|-++||||.+-|. ..+..++.....|...++.|+|...+.++||+|+++|+.+++.+ .
T Consensus 170 Sy~~sy~lpvv~~R~nnVYGP~q~~~-------klipkFi~l~~~~~~~~i~g~g~~~rs~l~veD~~ea~~~v~~K-g- 240 (331)
T KOG0747|consen 170 SYGRSYGLPVVTTRMNNVYGPNQYPE-------KLIPKFIKLAMRGKEYPIHGDGLQTRSYLYVEDVSEAFKAVLEK-G- 240 (331)
T ss_pred HHhhccCCcEEEEeccCccCCCcChH-------HHhHHHHHHHHhCCCcceecCcccceeeEeHHHHHHHHHHHHhc-C-
Confidence 98 6689999999999999988542 44556666667788888899999999999999999999988865 2
Q ss_pred CCCCCcEEEecCCCCC
Q 010075 322 QPSDANIYHVGSSLRN 337 (519)
Q Consensus 322 ~~~~~~iyni~s~~~~ 337 (519)
. .++|||+++..+.
T Consensus 241 ~--~geIYNIgtd~e~ 254 (331)
T KOG0747|consen 241 E--LGEIYNIGTDDEM 254 (331)
T ss_pred C--ccceeeccCcchh
Confidence 1 3799999997553
|
|
| >PRK10084 dTDP-glucose 4,6 dehydratase; Provisional | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.3e-26 Score=239.24 Aligned_cols=254 Identities=17% Similarity=0.198 Sum_probs=175.5
Q ss_pred CEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEEec
Q 010075 13 KTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVPG 92 (519)
Q Consensus 13 k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v~g 92 (519)
|+|||||||||||++|++.|++.|.. .|+++.|..... ..+++. ... ...+++++.+
T Consensus 1 mkilITGgtG~iG~~l~~~L~~~g~~--~v~~~~~~~~~~-~~~~~~-------------~~~-------~~~~~~~~~~ 57 (352)
T PRK10084 1 MKILVTGGAGFIGSAVVRHIINNTQD--SVVNVDKLTYAG-NLESLA-------------DVS-------DSERYVFEHA 57 (352)
T ss_pred CeEEEECCCcHHhHHHHHHHHHhCCC--eEEEecCCCccc-hHHHHH-------------hcc-------cCCceEEEEe
Confidence 47999999999999999999998743 244444322111 111111 000 0145788999
Q ss_pred cCCCCCCCCChhhhHHHHhc--CccEEEEcCccCCcc---ccHHHHHHHhHHHHHHHHHHHHhc--------cCCceEEE
Q 010075 93 DISSEDLGLKDSNLKEELWN--ELDIMVNSAAITKFD---ERYDVAFGINTLGVIHLVNFAKKC--------VKLKVFVH 159 (519)
Q Consensus 93 Dl~~~~lgls~~~~~~~l~~--~vdiViH~Aa~v~f~---~~~~~~~~~Nv~gt~~ll~~a~~~--------~~l~~~V~ 159 (519)
|+++ .+....+++ ++|+|||+||.+... ...+..+++|+.|+.+++++|++. ++.++|||
T Consensus 58 Dl~d-------~~~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~N~~gt~~ll~~~~~~~~~~~~~~~~~~~~i~ 130 (352)
T PRK10084 58 DICD-------RAELDRIFAQHQPDAVMHLAAESHVDRSITGPAAFIETNIVGTYVLLEAARNYWSALDEDKKNAFRFHH 130 (352)
T ss_pred cCCC-------HHHHHHHHHhcCCCEEEECCcccCCcchhcCchhhhhhhhHHHHHHHHHHHHhccccccccccceeEEE
Confidence 9995 333335554 599999999986532 345778999999999999999874 24679999
Q ss_pred EecceeecCcCC--eeec-c---cCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcHHHH
Q 010075 160 VSTAYVAGERTG--LILE-N---PLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVF 233 (519)
Q Consensus 160 vSTa~v~~~~~~--~i~E-~---~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~Y~~ 233 (519)
+||.++|+.... .+.+ . ++.|+. ...+.+.|+.
T Consensus 131 ~SS~~vyg~~~~~~~~~~~~~~~~~~E~~-----------------------------------------~~~p~~~Y~~ 169 (352)
T PRK10084 131 ISTDEVYGDLPHPDEVENSEELPLFTETT-----------------------------------------AYAPSSPYSA 169 (352)
T ss_pred ecchhhcCCCCccccccccccCCCccccC-----------------------------------------CCCCCChhHH
Confidence 999999986321 0000 0 111111 1245678999
Q ss_pred HHHHHHHHHHHh--hcCCcEEEEecCccccCCCCCCCcccccccccHHHHHHhhcCCceeeccCCCceeeeeeHHHHHHH
Q 010075 234 TKTMGEMLMQQS--KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNA 311 (519)
Q Consensus 234 sK~~aE~lv~~~--~~~lp~~IvRPs~V~g~~~~p~~gw~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~d~vpVDdva~a 311 (519)
||+.+|.++..+ ..+++++++||+.|||+...+ . .....++..+..|....+++++++.+|+|||+|+|++
T Consensus 170 sK~~~E~~~~~~~~~~g~~~vilr~~~v~Gp~~~~-~------~~~~~~~~~~~~~~~~~~~~~g~~~~~~v~v~D~a~a 242 (352)
T PRK10084 170 SKASSDHLVRAWLRTYGLPTIVTNCSNNYGPYHFP-E------KLIPLVILNALEGKPLPIYGKGDQIRDWLYVEDHARA 242 (352)
T ss_pred HHHHHHHHHHHHHHHhCCCEEEEeccceeCCCcCc-c------chHHHHHHHHhcCCCeEEeCCCCeEEeeEEHHHHHHH
Confidence 999999999876 458999999999999987532 1 1233455555666655677889999999999999999
Q ss_pred HHHHHHHhccCCCCCcEEEecCCCCCchhHHHHHHHH
Q 010075 312 MIVAMVAHAKQPSDANIYHVGSSLRNPVTLGLQVANT 348 (519)
Q Consensus 312 ii~a~~~~~~~~~~~~iyni~s~~~~~i~~~~~~~~~ 348 (519)
++.++... . .+++||++++...++..+...+..
T Consensus 243 ~~~~l~~~---~-~~~~yni~~~~~~s~~~~~~~i~~ 275 (352)
T PRK10084 243 LYKVVTEG---K-AGETYNIGGHNEKKNLDVVLTICD 275 (352)
T ss_pred HHHHHhcC---C-CCceEEeCCCCcCcHHHHHHHHHH
Confidence 99887632 1 257999999877665555554433
|
|
| >TIGR01472 gmd GDP-mannose 4,6-dehydratase | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.1e-26 Score=239.02 Aligned_cols=256 Identities=16% Similarity=0.145 Sum_probs=177.6
Q ss_pred CEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEEec
Q 010075 13 KTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVPG 92 (519)
Q Consensus 13 k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v~g 92 (519)
|+|||||||||||++|+++|++.| .+|+++.|+..... .+++. .+ .+..+ .....+++++.|
T Consensus 1 ~~vlVTGatGfIG~~l~~~L~~~G---~~V~~~~r~~~~~~-~~~~~-~~---------~~~~~----~~~~~~~~~~~~ 62 (343)
T TIGR01472 1 KIALITGITGQDGSYLAEFLLEKG---YEVHGLIRRSSSFN-TQRIE-HI---------YEDPH----NVNKARMKLHYG 62 (343)
T ss_pred CeEEEEcCCCcHHHHHHHHHHHCC---CEEEEEecCCcccc-hhhhh-hh---------hhccc----cccccceeEEEe
Confidence 689999999999999999999988 57889988754211 11211 00 00000 001246889999
Q ss_pred cCCCCCCCCChhhhHHHHhc--CccEEEEcCccCCcc---ccHHHHHHHhHHHHHHHHHHHHhccCC---ceEEEEecce
Q 010075 93 DISSEDLGLKDSNLKEELWN--ELDIMVNSAAITKFD---ERYDVAFGINTLGVIHLVNFAKKCVKL---KVFVHVSTAY 164 (519)
Q Consensus 93 Dl~~~~lgls~~~~~~~l~~--~vdiViH~Aa~v~f~---~~~~~~~~~Nv~gt~~ll~~a~~~~~l---~~~V~vSTa~ 164 (519)
|+++ .+....+++ ++|+|||+||..... +.....+++|+.||.+++++|++. ++ ++|||+||..
T Consensus 63 Dl~d-------~~~l~~~~~~~~~d~ViH~Aa~~~~~~~~~~~~~~~~~n~~gt~~ll~a~~~~-~~~~~~~~v~~SS~~ 134 (343)
T TIGR01472 63 DLTD-------SSNLRRIIDEIKPTEIYNLAAQSHVKVSFEIPEYTADVDGIGTLRLLEAVRTL-GLIKSVKFYQASTSE 134 (343)
T ss_pred ccCC-------HHHHHHHHHhCCCCEEEECCcccccchhhhChHHHHHHHHHHHHHHHHHHHHh-CCCcCeeEEEeccHH
Confidence 9995 333445555 479999999986532 334566788999999999999986 44 4899999999
Q ss_pred eecCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcHHHHHHHHHHHHHHH
Q 010075 165 VAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLMQQ 244 (519)
Q Consensus 165 v~~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~Y~~sK~~aE~lv~~ 244 (519)
+||.... .+.+|+.+. .+.+.|+.||..+|.+++.
T Consensus 135 vyg~~~~----~~~~E~~~~-----------------------------------------~p~~~Y~~sK~~~e~~~~~ 169 (343)
T TIGR01472 135 LYGKVQE----IPQNETTPF-----------------------------------------YPRSPYAAAKLYAHWITVN 169 (343)
T ss_pred hhCCCCC----CCCCCCCCC-----------------------------------------CCCChhHHHHHHHHHHHHH
Confidence 9986421 122222221 3567899999999999988
Q ss_pred h--hcCCcEEEEecCccccCCCCCCCcccccccccHHHHHHhhcCC-ceeeccCCCceeeeeeHHHHHHHHHHHHHHhcc
Q 010075 245 S--KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGN-LRCLVGETKVIMDVIPVDMVVNAMIVAMVAHAK 321 (519)
Q Consensus 245 ~--~~~lp~~IvRPs~V~g~~~~p~~gw~~~~~~~~~~i~~~~~g~-~~~~~~~~~~~~d~vpVDdva~aii~a~~~~~~ 321 (519)
+ ..++++++.|+..++|+.... ..+. ..+..++..+..|. ...+.|++++.+||+||||+|++++.++...
T Consensus 170 ~~~~~~~~~~~~~~~~~~gp~~~~--~~~~--~~~~~~~~~~~~~~~~~~~~g~g~~~rd~i~V~D~a~a~~~~~~~~-- 243 (343)
T TIGR01472 170 YREAYGLFAVNGILFNHESPRRGE--NFVT--RKITRAAAKIKLGLQEKLYLGNLDAKRDWGHAKDYVEAMWLMLQQD-- 243 (343)
T ss_pred HHHHhCCceEEEeecccCCCCCCc--cccc--hHHHHHHHHHHcCCCCceeeCCCccccCceeHHHHHHHHHHHHhcC--
Confidence 7 347899999999999986311 1111 12233444555564 3345688999999999999999999988632
Q ss_pred CCCCCcEEEecCCCCCchhHHHHHHHH
Q 010075 322 QPSDANIYHVGSSLRNPVTLGLQVANT 348 (519)
Q Consensus 322 ~~~~~~iyni~s~~~~~i~~~~~~~~~ 348 (519)
. .++||++++...++..+...+..
T Consensus 244 ~---~~~yni~~g~~~s~~e~~~~i~~ 267 (343)
T TIGR01472 244 K---PDDYVIATGETHSVREFVEVSFE 267 (343)
T ss_pred C---CccEEecCCCceeHHHHHHHHHH
Confidence 1 25899999987776665555443
|
Excluded from this model are members of the clade that score poorly because of highly dervied (phylogenetically long-branch) sequences, e.g. Aneurinibacillus thermoaerophilus Gmd, described as a bifunctional GDP-mannose 4,6-dehydratase/GDP-6-deoxy-D-lyxo-4-hexulose reductase (PUBMED:11096116). |
| >PRK11150 rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Provisional | Back alignment and domain information |
|---|
Probab=99.95 E-value=2e-26 Score=233.29 Aligned_cols=240 Identities=16% Similarity=0.147 Sum_probs=161.4
Q ss_pred EEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEEeccC
Q 010075 15 ILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVPGDI 94 (519)
Q Consensus 15 VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v~gDl 94 (519)
|||||||||||++|+++|++.| .++++++|......... ..+.+|+
T Consensus 2 ilVtGa~GfiG~~l~~~L~~~g---~~~v~~~~~~~~~~~~~-------------------------------~~~~~~~ 47 (308)
T PRK11150 2 IIVTGGAGFIGSNIVKALNDKG---ITDILVVDNLKDGTKFV-------------------------------NLVDLDI 47 (308)
T ss_pred EEEecCCcHHHHHHHHHHHhCC---CceEEEecCCCcchHHH-------------------------------hhhhhhh
Confidence 8999999999999999999987 45566666643211000 0112344
Q ss_pred CCCCCCCChhhhHHHHh-----cCccEEEEcCccCCc-cccHHHHHHHhHHHHHHHHHHHHhccCCceEEEEecceeecC
Q 010075 95 SSEDLGLKDSNLKEELW-----NELDIMVNSAAITKF-DERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAYVAGE 168 (519)
Q Consensus 95 ~~~~lgls~~~~~~~l~-----~~vdiViH~Aa~v~f-~~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V~vSTa~v~~~ 168 (519)
.+.. +..+..+.+. .++|+|||+||.... ..+....++.|+.||.+++++|++. +. +|||+||+++|+.
T Consensus 48 ~d~~---~~~~~~~~~~~~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~n~~~t~~ll~~~~~~-~~-~~i~~SS~~vyg~ 122 (308)
T PRK11150 48 ADYM---DKEDFLAQIMAGDDFGDIEAIFHEGACSSTTEWDGKYMMDNNYQYSKELLHYCLER-EI-PFLYASSAATYGG 122 (308)
T ss_pred hhhh---hHHHHHHHHhcccccCCccEEEECceecCCcCCChHHHHHHHHHHHHHHHHHHHHc-CC-cEEEEcchHHhCc
Confidence 3210 0122222332 269999999986432 2234557899999999999999986 55 6999999999986
Q ss_pred cCC-eeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcHHHHHHHHHHHHHHHh--
Q 010075 169 RTG-LILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLMQQS-- 245 (519)
Q Consensus 169 ~~~-~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~Y~~sK~~aE~lv~~~-- 245 (519)
..+ .++|. .+ ..+.+.|+.||..+|++++++
T Consensus 123 ~~~~~~~E~-----~~-----------------------------------------~~p~~~Y~~sK~~~E~~~~~~~~ 156 (308)
T PRK11150 123 RTDDFIEER-----EY-----------------------------------------EKPLNVYGYSKFLFDEYVRQILP 156 (308)
T ss_pred CCCCCCccC-----CC-----------------------------------------CCCCCHHHHHHHHHHHHHHHHHH
Confidence 432 22222 11 145678999999999999887
Q ss_pred hcCCcEEEEecCccccCCCCCCCcccccccccHHHHHHhhcCCceee-ccCCCceeeeeeHHHHHHHHHHHHHHhccCCC
Q 010075 246 KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCL-VGETKVIMDVIPVDMVVNAMIVAMVAHAKQPS 324 (519)
Q Consensus 246 ~~~lp~~IvRPs~V~g~~~~p~~gw~~~~~~~~~~i~~~~~g~~~~~-~~~~~~~~d~vpVDdva~aii~a~~~~~~~~~ 324 (519)
..+++++++||+.|||++..+ .+... .....+...+.+|....+ .++++..+|++||||+|++++.++... .
T Consensus 157 ~~~~~~~~lR~~~vyG~~~~~-~~~~~--~~~~~~~~~~~~~~~~~i~~g~~~~~r~~i~v~D~a~a~~~~~~~~---~- 229 (308)
T PRK11150 157 EANSQICGFRYFNVYGPREGH-KGSMA--SVAFHLNNQLNNGENPKLFEGSENFKRDFVYVGDVAAVNLWFWENG---V- 229 (308)
T ss_pred HcCCCEEEEeeeeecCCCCCC-CCccc--hhHHHHHHHHhcCCCCEEecCCCceeeeeeeHHHHHHHHHHHHhcC---C-
Confidence 458999999999999987633 11111 011123345556654433 366778999999999999999887632 1
Q ss_pred CCcEEEecCCCCCchhHHHHHHH
Q 010075 325 DANIYHVGSSLRNPVTLGLQVAN 347 (519)
Q Consensus 325 ~~~iyni~s~~~~~i~~~~~~~~ 347 (519)
+++||++++...++..+...+.
T Consensus 230 -~~~yni~~~~~~s~~el~~~i~ 251 (308)
T PRK11150 230 -SGIFNCGTGRAESFQAVADAVL 251 (308)
T ss_pred -CCeEEcCCCCceeHHHHHHHHH
Confidence 3599999997666554554443
|
|
| >PLN02650 dihydroflavonol-4-reductase | Back alignment and domain information |
|---|
Probab=99.95 E-value=3.3e-26 Score=236.20 Aligned_cols=259 Identities=17% Similarity=0.171 Sum_probs=166.3
Q ss_pred CCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEEe
Q 010075 12 NKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVP 91 (519)
Q Consensus 12 ~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v~ 91 (519)
.|+|||||||||||++|+++|++.| .+|++++|..........+. . .+. ...+++++.
T Consensus 5 ~k~iLVTGatGfIGs~l~~~L~~~G---~~V~~~~r~~~~~~~~~~~~-------------~-~~~-----~~~~~~~v~ 62 (351)
T PLN02650 5 KETVCVTGASGFIGSWLVMRLLERG---YTVRATVRDPANVKKVKHLL-------------D-LPG-----ATTRLTLWK 62 (351)
T ss_pred CCEEEEeCCcHHHHHHHHHHHHHCC---CEEEEEEcCcchhHHHHHHH-------------h-ccC-----CCCceEEEE
Confidence 5799999999999999999999988 67888988753321111100 0 000 013578999
Q ss_pred ccCCCCCCCCChhhhHHHHhcCccEEEEcCccCCcc--ccHHHHHHHhHHHHHHHHHHHHhccCCceEEEEecceeecCc
Q 010075 92 GDISSEDLGLKDSNLKEELWNELDIMVNSAAITKFD--ERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAYVAGER 169 (519)
Q Consensus 92 gDl~~~~lgls~~~~~~~l~~~vdiViH~Aa~v~f~--~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V~vSTa~v~~~~ 169 (519)
+|+++ .+....+++++|+|||+|+..... ++....+++|+.||.+++++|.+...+++|||+||+.+++..
T Consensus 63 ~Dl~d-------~~~~~~~~~~~d~ViH~A~~~~~~~~~~~~~~~~~Nv~gt~~ll~aa~~~~~~~r~v~~SS~~~~~~~ 135 (351)
T PLN02650 63 ADLAV-------EGSFDDAIRGCTGVFHVATPMDFESKDPENEVIKPTVNGMLSIMKACAKAKTVRRIVFTSSAGTVNVE 135 (351)
T ss_pred ecCCC-------hhhHHHHHhCCCEEEEeCCCCCCCCCCchhhhhhHHHHHHHHHHHHHHhcCCceEEEEecchhhcccC
Confidence 99995 333446777899999999976542 334567899999999999999986447899999999776542
Q ss_pred CCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcHHHHHHHHHHHHHHHh--hc
Q 010075 170 TGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLMQQS--KE 247 (519)
Q Consensus 170 ~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~Y~~sK~~aE~lv~~~--~~ 247 (519)
.+. ...++|....+.+.. + ....+.+.|+.||..+|.+++.+ ..
T Consensus 136 ~~~--~~~~~E~~~~~~~~~-------------------------------~-~~~~~~~~Y~~sK~~~E~~~~~~~~~~ 181 (351)
T PLN02650 136 EHQ--KPVYDEDCWSDLDFC-------------------------------R-RKKMTGWMYFVSKTLAEKAAWKYAAEN 181 (351)
T ss_pred CCC--CCccCcccCCchhhh-------------------------------h-ccccccchHHHHHHHHHHHHHHHHHHc
Confidence 210 001222111100000 0 00123458999999999999887 45
Q ss_pred CCcEEEEecCccccCCCCCCCcccccccccHHHHHH--hhcCCceeeccCCCceeeeeeHHHHHHHHHHHHHHhccCCCC
Q 010075 248 NLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVA--SAQGNLRCLVGETKVIMDVIPVDMVVNAMIVAMVAHAKQPSD 325 (519)
Q Consensus 248 ~lp~~IvRPs~V~g~~~~p~~gw~~~~~~~~~~i~~--~~~g~~~~~~~~~~~~~d~vpVDdva~aii~a~~~~~~~~~~ 325 (519)
+++++++||++|||+...+. .+..++.. ...|.... .+. ...+|||||+|+|++++.++.....
T Consensus 182 gi~~~ilRp~~v~Gp~~~~~--------~~~~~~~~~~~~~~~~~~-~~~-~~~r~~v~V~Dva~a~~~~l~~~~~---- 247 (351)
T PLN02650 182 GLDFISIIPTLVVGPFISTS--------MPPSLITALSLITGNEAH-YSI-IKQGQFVHLDDLCNAHIFLFEHPAA---- 247 (351)
T ss_pred CCeEEEECCCceECCCCCCC--------CCccHHHHHHHhcCCccc-cCc-CCCcceeeHHHHHHHHHHHhcCcCc----
Confidence 89999999999999976431 01111111 12222211 222 2347999999999999999864221
Q ss_pred CcEEEecCCCCCchhHHHHHHHH
Q 010075 326 ANIYHVGSSLRNPVTLGLQVANT 348 (519)
Q Consensus 326 ~~iyni~s~~~~~i~~~~~~~~~ 348 (519)
..+| ++++...++..+...+..
T Consensus 248 ~~~~-i~~~~~~s~~el~~~i~~ 269 (351)
T PLN02650 248 EGRY-ICSSHDATIHDLAKMLRE 269 (351)
T ss_pred CceE-EecCCCcCHHHHHHHHHH
Confidence 2478 456655555444444433
|
|
| >TIGR01181 dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase | Back alignment and domain information |
|---|
Probab=99.95 E-value=5.6e-26 Score=230.03 Aligned_cols=251 Identities=21% Similarity=0.284 Sum_probs=177.2
Q ss_pred EEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEEecc
Q 010075 14 TILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVPGD 93 (519)
Q Consensus 14 ~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v~gD 93 (519)
+|||||||||||++++++|++.+++ .+|+++.|...... .+++.+ + . ...+++++.+|
T Consensus 1 ~ilItGatG~iG~~l~~~l~~~~~~-~~v~~~~~~~~~~~-~~~~~~-~---------~----------~~~~~~~~~~D 58 (317)
T TIGR01181 1 RILVTGGAGFIGSNFVRYILNEHPD-AEVIVLDKLTYAGN-LENLAD-L---------E----------DNPRYRFVKGD 58 (317)
T ss_pred CEEEEcCCchHHHHHHHHHHHhCCC-CEEEEecCCCcchh-hhhhhh-h---------c----------cCCCcEEEEcC
Confidence 5899999999999999999998754 47777776432111 111110 0 0 01367889999
Q ss_pred CCCCCCCCChhhhHHHHhcC--ccEEEEcCccCCcc---ccHHHHHHHhHHHHHHHHHHHHhccCCceEEEEecceeecC
Q 010075 94 ISSEDLGLKDSNLKEELWNE--LDIMVNSAAITKFD---ERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAYVAGE 168 (519)
Q Consensus 94 l~~~~lgls~~~~~~~l~~~--vdiViH~Aa~v~f~---~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V~vSTa~v~~~ 168 (519)
+++ .+....+++. +|+|||+||....+ +..+..+++|+.|+.+++++|++...-.++||+||..+++.
T Consensus 59 l~~-------~~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~Ss~~v~g~ 131 (317)
T TIGR01181 59 IGD-------RELVSRLFTEHQPDAVVHFAAESHVDRSISGPAAFIETNVVGTYTLLEAVRKYWHEFRFHHISTDEVYGD 131 (317)
T ss_pred CcC-------HHHHHHHHhhcCCCEEEEcccccCchhhhhCHHHHHHHHHHHHHHHHHHHHhcCCCceEEEeeccceeCC
Confidence 995 3334466665 99999999986543 45667899999999999999987522237999999999986
Q ss_pred cCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcHHHHHHHHHHHHHHHh--h
Q 010075 169 RTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLMQQS--K 246 (519)
Q Consensus 169 ~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~Y~~sK~~aE~lv~~~--~ 246 (519)
.... .+++|..+. .+.+.|+.+|+.+|.+++.+ .
T Consensus 132 ~~~~---~~~~e~~~~-----------------------------------------~~~~~Y~~sK~~~e~~~~~~~~~ 167 (317)
T TIGR01181 132 LEKG---DAFTETTPL-----------------------------------------APSSPYSASKAASDHLVRAYHRT 167 (317)
T ss_pred CCCC---CCcCCCCCC-----------------------------------------CCCCchHHHHHHHHHHHHHHHHH
Confidence 4310 122222211 34568999999999999876 4
Q ss_pred cCCcEEEEecCccccCCCCCCCcccccccccHHHHHHhhcCCceeeccCCCceeeeeeHHHHHHHHHHHHHHhccCCCCC
Q 010075 247 ENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMIVAMVAHAKQPSDA 326 (519)
Q Consensus 247 ~~lp~~IvRPs~V~g~~~~p~~gw~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~d~vpVDdva~aii~a~~~~~~~~~~~ 326 (519)
.+++++++||+.|||+...+ . .....++..+..|....+.++++..++++|+||+|+++..++.... .+
T Consensus 168 ~~~~~~i~R~~~i~G~~~~~-~------~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~D~a~~~~~~~~~~~----~~ 236 (317)
T TIGR01181 168 YGLPALITRCSNNYGPYQFP-E------KLIPLMITNALAGKPLPVYGDGQQVRDWLYVEDHCRAIYLVLEKGR----VG 236 (317)
T ss_pred hCCCeEEEEeccccCCCCCc-c------cHHHHHHHHHhcCCCceEeCCCceEEeeEEHHHHHHHHHHHHcCCC----CC
Confidence 68999999999999986532 1 1233455666666656667888899999999999999998885321 25
Q ss_pred cEEEecCCCCCchhHHHHHHHH
Q 010075 327 NIYHVGSSLRNPVTLGLQVANT 348 (519)
Q Consensus 327 ~iyni~s~~~~~i~~~~~~~~~ 348 (519)
++||++++...+...+...+..
T Consensus 237 ~~~~~~~~~~~s~~~~~~~i~~ 258 (317)
T TIGR01181 237 ETYNIGGGNERTNLEVVETILE 258 (317)
T ss_pred ceEEeCCCCceeHHHHHHHHHH
Confidence 7999999866554444444433
|
This protein is related to UDP-glucose 4-epimerase (GalE) and likewise has an NAD cofactor. |
| >PRK09987 dTDP-4-dehydrorhamnose reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.95 E-value=4.4e-26 Score=230.11 Aligned_cols=221 Identities=23% Similarity=0.174 Sum_probs=158.9
Q ss_pred CEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEEec
Q 010075 13 KTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVPG 92 (519)
Q Consensus 13 k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v~g 92 (519)
|+|||||||||||++|+++|++.| + |+++.|.. ..+.|
T Consensus 1 m~iLVtG~~GfiGs~l~~~L~~~g-~---V~~~~~~~--------------------------------------~~~~~ 38 (299)
T PRK09987 1 MNILLFGKTGQVGWELQRALAPLG-N---LIALDVHS--------------------------------------TDYCG 38 (299)
T ss_pred CeEEEECCCCHHHHHHHHHhhccC-C---EEEecccc--------------------------------------ccccC
Confidence 579999999999999999999876 3 56666641 12468
Q ss_pred cCCCCCCCCChhhhHHHHhc--CccEEEEcCccCCcc---ccHHHHHHHhHHHHHHHHHHHHhccCCceEEEEecceeec
Q 010075 93 DISSEDLGLKDSNLKEELWN--ELDIMVNSAAITKFD---ERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAYVAG 167 (519)
Q Consensus 93 Dl~~~~lgls~~~~~~~l~~--~vdiViH~Aa~v~f~---~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V~vSTa~v~~ 167 (519)
|+++ .+....+++ ++|+||||||....+ ...+.+.++|+.|+.+++++|++. +. +|||+||.+||+
T Consensus 39 Dl~d-------~~~~~~~~~~~~~D~Vih~Aa~~~~~~~~~~~~~~~~~N~~~~~~l~~aa~~~-g~-~~v~~Ss~~Vy~ 109 (299)
T PRK09987 39 DFSN-------PEGVAETVRKIRPDVIVNAAAHTAVDKAESEPEFAQLLNATSVEAIAKAANEV-GA-WVVHYSTDYVFP 109 (299)
T ss_pred CCCC-------HHHHHHHHHhcCCCEEEECCccCCcchhhcCHHHHHHHHHHHHHHHHHHHHHc-CC-eEEEEccceEEC
Confidence 9984 333445555 589999999987643 345677899999999999999997 54 799999999998
Q ss_pred CcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcHHHHHHHHHHHHHHHhhc
Q 010075 168 ERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLMQQSKE 247 (519)
Q Consensus 168 ~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~Y~~sK~~aE~lv~~~~~ 247 (519)
... +.+++|+.+. .|.+.|+.||..+|+++..+.
T Consensus 110 ~~~----~~p~~E~~~~-----------------------------------------~P~~~Yg~sK~~~E~~~~~~~- 143 (299)
T PRK09987 110 GTG----DIPWQETDAT-----------------------------------------APLNVYGETKLAGEKALQEHC- 143 (299)
T ss_pred CCC----CCCcCCCCCC-----------------------------------------CCCCHHHHHHHHHHHHHHHhC-
Confidence 643 2234433322 456889999999999998763
Q ss_pred CCcEEEEecCccccCCCCCCCcccccccccHHHHHHhhcCCceeeccC--CCceeeeeeHHHHHHHHHHHHHHhccCCCC
Q 010075 248 NLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGE--TKVIMDVIPVDMVVNAMIVAMVAHAKQPSD 325 (519)
Q Consensus 248 ~lp~~IvRPs~V~g~~~~p~~gw~~~~~~~~~~i~~~~~g~~~~~~~~--~~~~~d~vpVDdva~aii~a~~~~~~~~~~ 325 (519)
.+.+|+||+.|||+... +....++..+..|....+.++ +....++..+|+++.++..++... . .
T Consensus 144 -~~~~ilR~~~vyGp~~~---------~~~~~~~~~~~~~~~~~v~~d~~g~~~~~~~~~d~~~~~~~~~~~~~--~--~ 209 (299)
T PRK09987 144 -AKHLIFRTSWVYAGKGN---------NFAKTMLRLAKEREELSVINDQFGAPTGAELLADCTAHAIRVALNKP--E--V 209 (299)
T ss_pred -CCEEEEecceecCCCCC---------CHHHHHHHHHhcCCCeEEeCCCcCCCCCHHHHHHHHHHHHHHhhccC--C--C
Confidence 35799999999998541 123445555556666666666 555556666788888887766421 1 1
Q ss_pred CcEEEecCCCCCchhHHHH
Q 010075 326 ANIYHVGSSLRNPVTLGLQ 344 (519)
Q Consensus 326 ~~iyni~s~~~~~i~~~~~ 344 (519)
.++||++++...++..+..
T Consensus 210 ~giyni~~~~~~s~~e~~~ 228 (299)
T PRK09987 210 AGLYHLVASGTTTWHDYAA 228 (299)
T ss_pred CCeEEeeCCCCccHHHHHH
Confidence 3599999986655433333
|
|
| >PLN02240 UDP-glucose 4-epimerase | Back alignment and domain information |
|---|
Probab=99.95 E-value=3.5e-25 Score=228.38 Aligned_cols=265 Identities=19% Similarity=0.213 Sum_probs=179.3
Q ss_pred cCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCccc-HHHHHHHHHhhhhhHHHHHhhhccccccccCCceE
Q 010075 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDS-AALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKIT 88 (519)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~-~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~ 88 (519)
+++|+|+|||||||+|++|+++|++.| .+|+++.|...... ..+++. .... ....++.
T Consensus 3 ~~~~~vlItGatG~iG~~l~~~L~~~g---~~V~~~~~~~~~~~~~~~~~~-------------~~~~-----~~~~~~~ 61 (352)
T PLN02240 3 LMGRTILVTGGAGYIGSHTVLQLLLAG---YKVVVIDNLDNSSEEALRRVK-------------ELAG-----DLGDNLV 61 (352)
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHCC---CEEEEEeCCCcchHHHHHHHH-------------Hhhc-----ccCccce
Confidence 567999999999999999999999988 57888887643221 111221 0000 0124678
Q ss_pred EEeccCCCCCCCCChhhhHHHHhc--CccEEEEcCccCCcc---ccHHHHHHHhHHHHHHHHHHHHhccCCceEEEEecc
Q 010075 89 FVPGDISSEDLGLKDSNLKEELWN--ELDIMVNSAAITKFD---ERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTA 163 (519)
Q Consensus 89 ~v~gDl~~~~lgls~~~~~~~l~~--~vdiViH~Aa~v~f~---~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V~vSTa 163 (519)
++.+|+++ .+....+++ ++|+|||+||..... ......+++|+.++.+++++|++. ++++||++||+
T Consensus 62 ~~~~D~~~-------~~~l~~~~~~~~~d~vih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~~v~~Ss~ 133 (352)
T PLN02240 62 FHKVDLRD-------KEALEKVFASTRFDAVIHFAGLKAVGESVAKPLLYYDNNLVGTINLLEVMAKH-GCKKLVFSSSA 133 (352)
T ss_pred EEecCcCC-------HHHHHHHHHhCCCCEEEEccccCCccccccCHHHHHHHHHHHHHHHHHHHHHc-CCCEEEEEccH
Confidence 99999995 333335543 699999999975432 356678999999999999999885 78899999999
Q ss_pred eeecCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcHHHHHHHHHHHHHH
Q 010075 164 YVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLMQ 243 (519)
Q Consensus 164 ~v~~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~Y~~sK~~aE~lv~ 243 (519)
.+|+...+ .+++|+.+. .+.+.|+.||..+|++++
T Consensus 134 ~vyg~~~~----~~~~E~~~~-----------------------------------------~~~~~Y~~sK~~~e~~~~ 168 (352)
T PLN02240 134 TVYGQPEE----VPCTEEFPL-----------------------------------------SATNPYGRTKLFIEEICR 168 (352)
T ss_pred HHhCCCCC----CCCCCCCCC-----------------------------------------CCCCHHHHHHHHHHHHHH
Confidence 99975321 122222222 345789999999999998
Q ss_pred Hh---hcCCcEEEEecCccccCCCCCCCccccc--ccccHHHHHHhhcCCc--eeecc------CCCceeeeeeHHHHHH
Q 010075 244 QS---KENLSLVIIRPTVVSGTYKEPFPGWVED--LKTINTLFVASAQGNL--RCLVG------ETKVIMDVIPVDMVVN 310 (519)
Q Consensus 244 ~~---~~~lp~~IvRPs~V~g~~~~p~~gw~~~--~~~~~~~i~~~~~g~~--~~~~~------~~~~~~d~vpVDdva~ 310 (519)
.+ ..+++++++|++.|||++....-|.-.. ...+..++..+..|.. ..+.+ ++.+.+++|||+|+|+
T Consensus 169 ~~~~~~~~~~~~~~R~~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~i~v~D~a~ 248 (352)
T PLN02240 169 DIHASDPEWKIILLRYFNPVGAHPSGRIGEDPKGIPNNLMPYVQQVAVGRRPELTVFGNDYPTKDGTGVRDYIHVMDLAD 248 (352)
T ss_pred HHHHhcCCCCEEEEeecCcCCCCccccccCCCCCCcchHHHHHHHHHhCCCCceEEeCCCCCCCCCCEEEeeEEHHHHHH
Confidence 75 2468999999999999754211111000 0122234444444432 22333 6789999999999999
Q ss_pred HHHHHHHHhcc-CCCCCcEEEecCCCCCchhHHHHHHHH
Q 010075 311 AMIVAMVAHAK-QPSDANIYHVGSSLRNPVTLGLQVANT 348 (519)
Q Consensus 311 aii~a~~~~~~-~~~~~~iyni~s~~~~~i~~~~~~~~~ 348 (519)
+++.++..... ....+++||++++...++..++..+..
T Consensus 249 a~~~a~~~~~~~~~~~~~~yni~~~~~~s~~el~~~i~~ 287 (352)
T PLN02240 249 GHIAALRKLFTDPDIGCEAYNLGTGKGTSVLEMVAAFEK 287 (352)
T ss_pred HHHHHHhhhhhccCCCCceEEccCCCcEeHHHHHHHHHH
Confidence 99988864311 112257999999977776555555443
|
|
| >COG0451 WcaG Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.2e-25 Score=227.34 Aligned_cols=240 Identities=23% Similarity=0.283 Sum_probs=177.1
Q ss_pred CEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEEec
Q 010075 13 KTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVPG 92 (519)
Q Consensus 13 k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v~g 92 (519)
++|||||||||||++|+++|++.| ++|+++.|........ ...+.++.+
T Consensus 1 ~~ILVtG~tGfiG~~l~~~L~~~g---~~V~~~~r~~~~~~~~----------------------------~~~~~~~~~ 49 (314)
T COG0451 1 MRILVTGGAGFIGSHLVERLLAAG---HDVRGLDRLRDGLDPL----------------------------LSGVEFVVL 49 (314)
T ss_pred CeEEEEcCcccHHHHHHHHHHhCC---CeEEEEeCCCcccccc----------------------------ccccceeee
Confidence 359999999999999999999988 6778999876443211 035678899
Q ss_pred cCCCCCCCCChhhhHHHHhcCc-cEEEEcCccCCcccc----HHHHHHHhHHHHHHHHHHHHhccCCceEEEEecceeec
Q 010075 93 DISSEDLGLKDSNLKEELWNEL-DIMVNSAAITKFDER----YDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAYVAG 167 (519)
Q Consensus 93 Dl~~~~lgls~~~~~~~l~~~v-diViH~Aa~v~f~~~----~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V~vSTa~v~~ 167 (519)
|+++. +......+.+ |+|||+||....... ......+|+.||.+++++|++ .++++|||.||.++++
T Consensus 50 d~~~~-------~~~~~~~~~~~d~vih~aa~~~~~~~~~~~~~~~~~~nv~gt~~ll~aa~~-~~~~~~v~~ss~~~~~ 121 (314)
T COG0451 50 DLTDR-------DLVDELAKGVPDAVIHLAAQSSVPDSNASDPAEFLDVNVDGTLNLLEAARA-AGVKRFVFASSVSVVY 121 (314)
T ss_pred cccch-------HHHHHHHhcCCCEEEEccccCchhhhhhhCHHHHHHHHHHHHHHHHHHHHH-cCCCeEEEeCCCceEC
Confidence 99953 4444566667 999999999865433 346899999999999999999 5999999988888777
Q ss_pred Cc-CC-eeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcHHHHHHHHHHHHHHHh
Q 010075 168 ER-TG-LILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLMQQS 245 (519)
Q Consensus 168 ~~-~~-~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~Y~~sK~~aE~lv~~~ 245 (519)
.. .+ .++|.. .+. .+.+.|+.||.++|+++..+
T Consensus 122 ~~~~~~~~~E~~----~~~-----------------------------------------~p~~~Yg~sK~~~E~~~~~~ 156 (314)
T COG0451 122 GDPPPLPIDEDL----GPP-----------------------------------------RPLNPYGVSKLAAEQLLRAY 156 (314)
T ss_pred CCCCCCCccccc----CCC-----------------------------------------CCCCHHHHHHHHHHHHHHHH
Confidence 54 11 223321 111 23348999999999999988
Q ss_pred h--cCCcEEEEecCccccCCCCCC-CcccccccccHHHHHHhhcCCc-eeeccCCCceeeeeeHHHHHHHHHHHHHHhcc
Q 010075 246 K--ENLSLVIIRPTVVSGTYKEPF-PGWVEDLKTINTLFVASAQGNL-RCLVGETKVIMDVIPVDMVVNAMIVAMVAHAK 321 (519)
Q Consensus 246 ~--~~lp~~IvRPs~V~g~~~~p~-~gw~~~~~~~~~~i~~~~~g~~-~~~~~~~~~~~d~vpVDdva~aii~a~~~~~~ 321 (519)
. .+++++++||+.|||+...+. ++ .....++.....+.. ..+.+++...+++++|||+|.+++.++.....
T Consensus 157 ~~~~~~~~~ilR~~~vyGp~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~ 231 (314)
T COG0451 157 ARLYGLPVVILRPFNVYGPGDKPDLSS-----GVVSAFIRQLLKGEPIIVIGGDGSQTRDFVYVDDVADALLLALENPDG 231 (314)
T ss_pred HHHhCCCeEEEeeeeeeCCCCCCCCCc-----CcHHHHHHHHHhCCCcceEeCCCceeEeeEeHHHHHHHHHHHHhCCCC
Confidence 4 589999999999999987542 11 122234444566664 66677888889999999999999999974322
Q ss_pred CCCCCcEEEecCCC-CCchhHHHHHH
Q 010075 322 QPSDANIYHVGSSL-RNPVTLGLQVA 346 (519)
Q Consensus 322 ~~~~~~iyni~s~~-~~~i~~~~~~~ 346 (519)
. +||++++. ..++..+...+
T Consensus 232 ----~-~~ni~~~~~~~~~~e~~~~~ 252 (314)
T COG0451 232 ----G-VFNIGSGTAEITVRELAEAV 252 (314)
T ss_pred ----c-EEEeCCCCCcEEHHHHHHHH
Confidence 3 99999986 55544444433
|
|
| >PLN02653 GDP-mannose 4,6-dehydratase | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.1e-25 Score=231.30 Aligned_cols=255 Identities=15% Similarity=0.099 Sum_probs=175.9
Q ss_pred cCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 010075 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (519)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (519)
.++|+|||||||||||++|+++|++.| .+|+++.|....... +++. . +..+. .....++.+
T Consensus 4 ~~~~~vlVTGatGfiG~~l~~~L~~~G---~~V~~~~r~~~~~~~-~~~~-~---------~~~~~-----~~~~~~~~~ 64 (340)
T PLN02653 4 PPRKVALITGITGQDGSYLTEFLLSKG---YEVHGIIRRSSNFNT-QRLD-H---------IYIDP-----HPNKARMKL 64 (340)
T ss_pred CCCCEEEEECCCCccHHHHHHHHHHCC---CEEEEEecccccccc-cchh-h---------hcccc-----ccccCceEE
Confidence 357999999999999999999999988 578888886532110 1111 0 00000 001246889
Q ss_pred EeccCCCCCCCCChhhhHHHHhc--CccEEEEcCccCCcc---ccHHHHHHHhHHHHHHHHHHHHhccCCc-----eEEE
Q 010075 90 VPGDISSEDLGLKDSNLKEELWN--ELDIMVNSAAITKFD---ERYDVAFGINTLGVIHLVNFAKKCVKLK-----VFVH 159 (519)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~~--~vdiViH~Aa~v~f~---~~~~~~~~~Nv~gt~~ll~~a~~~~~l~-----~~V~ 159 (519)
+.+|+++ .+....+++ ++|+|||+||..... +.....+++|+.||.+++++|++. +++ +||+
T Consensus 65 ~~~Dl~d-------~~~~~~~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~N~~gt~~ll~~~~~~-~~~~~~~~~~v~ 136 (340)
T PLN02653 65 HYGDLSD-------ASSLRRWLDDIKPDEVYNLAAQSHVAVSFEMPDYTADVVATGALRLLEAVRLH-GQETGRQIKYYQ 136 (340)
T ss_pred EEecCCC-------HHHHHHHHHHcCCCEEEECCcccchhhhhhChhHHHHHHHHHHHHHHHHHHHh-ccccccceeEEE
Confidence 9999995 333334554 479999999986432 345666799999999999999886 443 8999
Q ss_pred EecceeecCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcHHHHHHHHHH
Q 010075 160 VSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGE 239 (519)
Q Consensus 160 vSTa~v~~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~Y~~sK~~aE 239 (519)
+||..+||.....++| +.+. .+.+.|+.||.++|
T Consensus 137 ~Ss~~vyg~~~~~~~E-----~~~~-----------------------------------------~p~~~Y~~sK~~~e 170 (340)
T PLN02653 137 AGSSEMYGSTPPPQSE-----TTPF-----------------------------------------HPRSPYAVAKVAAH 170 (340)
T ss_pred eccHHHhCCCCCCCCC-----CCCC-----------------------------------------CCCChhHHHHHHHH
Confidence 9999999975422222 2221 35678999999999
Q ss_pred HHHHHh--hcCCcEEEEecCccccCCCCCCCcccccccccHHHHHHhhcCCce-eeccCCCceeeeeeHHHHHHHHHHHH
Q 010075 240 MLMQQS--KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLR-CLVGETKVIMDVIPVDMVVNAMIVAM 316 (519)
Q Consensus 240 ~lv~~~--~~~lp~~IvRPs~V~g~~~~p~~gw~~~~~~~~~~i~~~~~g~~~-~~~~~~~~~~d~vpVDdva~aii~a~ 316 (519)
.+++.+ ..+++++..|+..+||+...+ .++. .....++..+..|... .+.+++++.+||+||+|+|++++.++
T Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~gp~~~~--~~~~--~~~~~~~~~~~~~~~~~~~~g~g~~~rd~i~v~D~a~a~~~~~ 246 (340)
T PLN02653 171 WYTVNYREAYGLFACNGILFNHESPRRGE--NFVT--RKITRAVGRIKVGLQKKLFLGNLDASRDWGFAGDYVEAMWLML 246 (340)
T ss_pred HHHHHHHHHcCCeEEEeeeccccCCCCCc--ccch--hHHHHHHHHHHcCCCCceEeCCCcceecceeHHHHHHHHHHHH
Confidence 999877 457888889999999875421 1111 1112223344455433 34588999999999999999999998
Q ss_pred HHhccCCCCCcEEEecCCCCCchhHHHHHH
Q 010075 317 VAHAKQPSDANIYHVGSSLRNPVTLGLQVA 346 (519)
Q Consensus 317 ~~~~~~~~~~~iyni~s~~~~~i~~~~~~~ 346 (519)
... . .++||++++...++..+...+
T Consensus 247 ~~~---~--~~~yni~~g~~~s~~e~~~~i 271 (340)
T PLN02653 247 QQE---K--PDDYVVATEESHTVEEFLEEA 271 (340)
T ss_pred hcC---C--CCcEEecCCCceeHHHHHHHH
Confidence 642 1 358999999777755544443
|
|
| >KOG1430 consensus C-3 sterol dehydrogenase/3-beta-hydroxysteroid dehydrogenase and related dehydrogenases [Lipid transport and metabolism; Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.94 E-value=4e-25 Score=222.68 Aligned_cols=246 Identities=20% Similarity=0.306 Sum_probs=185.2
Q ss_pred CCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEE
Q 010075 11 ENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFV 90 (519)
Q Consensus 11 ~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v 90 (519)
++.+++||||+||+|.+|+++|++.++. .+|.++.............. .+...+++.+
T Consensus 3 ~~~~vlVtGG~GflG~hlv~~L~~~~~~-~~irv~D~~~~~~~~~~e~~---------------------~~~~~~v~~~ 60 (361)
T KOG1430|consen 3 KKLSVLVTGGSGFLGQHLVQALLENELK-LEIRVVDKTPTQSNLPAELT---------------------GFRSGRVTVI 60 (361)
T ss_pred cCCEEEEECCccHHHHHHHHHHHhcccc-cEEEEeccCccccccchhhh---------------------cccCCceeEE
Confidence 4678999999999999999999998753 56666665543211111110 1124788999
Q ss_pred eccCCCCCCCCChhhhHHHHhcCccEEEEcCccCC--ccc-cHHHHHHHhHHHHHHHHHHHHhccCCceEEEEecceeec
Q 010075 91 PGDISSEDLGLKDSNLKEELWNELDIMVNSAAITK--FDE-RYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAYVAG 167 (519)
Q Consensus 91 ~gDl~~~~lgls~~~~~~~l~~~vdiViH~Aa~v~--f~~-~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V~vSTa~v~~ 167 (519)
.+|+.+ .......+.++ .|+||||... +.. +.+...++||.||+++++.|++. +++++||+||++|..
T Consensus 61 ~~D~~~-------~~~i~~a~~~~-~Vvh~aa~~~~~~~~~~~~~~~~vNV~gT~nvi~~c~~~-~v~~lIYtSs~~Vvf 131 (361)
T KOG1430|consen 61 LGDLLD-------ANSISNAFQGA-VVVHCAASPVPDFVENDRDLAMRVNVNGTLNVIEACKEL-GVKRLIYTSSAYVVF 131 (361)
T ss_pred ecchhh-------hhhhhhhccCc-eEEEeccccCccccccchhhheeecchhHHHHHHHHHHh-CCCEEEEecCceEEe
Confidence 999994 44445677788 8888888753 444 57888999999999999999997 999999999999986
Q ss_pred CcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcHHHHHHHHHHHHHHHhh-
Q 010075 168 ERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLMQQSK- 246 (519)
Q Consensus 168 ~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~Y~~sK~~aE~lv~~~~- 246 (519)
.....+. .+|+.|. +..+.+.|+.||+.||+++.+..
T Consensus 132 ~g~~~~n---~~E~~p~---------------------------------------p~~~~d~Y~~sKa~aE~~Vl~an~ 169 (361)
T KOG1430|consen 132 GGEPIIN---GDESLPY---------------------------------------PLKHIDPYGESKALAEKLVLEANG 169 (361)
T ss_pred CCeeccc---CCCCCCC---------------------------------------ccccccccchHHHHHHHHHHHhcC
Confidence 5431110 0111111 12567899999999999999984
Q ss_pred -cCCcEEEEecCccccCCCCCCCcccccccccHHHHHHhhcCCceeeccCCCceeeeeeHHHHHHHHHHHHHHhc--cCC
Q 010075 247 -ENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMIVAMVAHA--KQP 323 (519)
Q Consensus 247 -~~lp~~IvRPs~V~g~~~~p~~gw~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~d~vpVDdva~aii~a~~~~~--~~~ 323 (519)
.++..+++||++|||+++. .....++..+..|......++++..-|+++++.||-|++.|..... ...
T Consensus 170 ~~~l~T~aLR~~~IYGpgd~---------~~~~~i~~~~~~g~~~f~~g~~~~~~~~~~~~Nva~ahilA~~aL~~~~~~ 240 (361)
T KOG1430|consen 170 SDDLYTCALRPPGIYGPGDK---------RLLPKIVEALKNGGFLFKIGDGENLNDFTYGENVAWAHILAARALLDKSPS 240 (361)
T ss_pred CCCeeEEEEccccccCCCCc---------cccHHHHHHHHccCceEEeeccccccceEEechhHHHHHHHHHHHHhcCCc
Confidence 4699999999999999873 3455677788888888888999999999999999999999887543 222
Q ss_pred CCCcEEEecCCCCCchh
Q 010075 324 SDANIYHVGSSLRNPVT 340 (519)
Q Consensus 324 ~~~~iyni~s~~~~~i~ 340 (519)
..|++|+|+++ +|+.
T Consensus 241 ~~Gq~yfI~d~--~p~~ 255 (361)
T KOG1430|consen 241 VNGQFYFITDD--TPVR 255 (361)
T ss_pred cCceEEEEeCC--Ccch
Confidence 35899999998 4444
|
|
| >TIGR02197 heptose_epim ADP-L-glycero-D-manno-heptose-6-epimerase | Back alignment and domain information |
|---|
Probab=99.94 E-value=7.3e-25 Score=222.08 Aligned_cols=241 Identities=15% Similarity=0.149 Sum_probs=166.9
Q ss_pred EEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEEeccC
Q 010075 15 ILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVPGDI 94 (519)
Q Consensus 15 VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v~gDl 94 (519)
|||||||||||+++++.|++.|+ ..|+++.|+.... ++.. -....+.+|+
T Consensus 1 ilItGatG~iG~~l~~~L~~~g~--~~v~~~~~~~~~~----~~~~------------------------~~~~~~~~d~ 50 (314)
T TIGR02197 1 IIVTGGAGFIGSNLVKALNERGI--TDILVVDNLRDGH----KFLN------------------------LADLVIADYI 50 (314)
T ss_pred CEEeCCcchhhHHHHHHHHHcCC--ceEEEEecCCCch----hhhh------------------------hhheeeeccC
Confidence 69999999999999999999884 2577776654321 1110 0013456777
Q ss_pred CCCCCCCChhhhHHHHh----cCccEEEEcCccCCcc-ccHHHHHHHhHHHHHHHHHHHHhccCCceEEEEecceeecCc
Q 010075 95 SSEDLGLKDSNLKEELW----NELDIMVNSAAITKFD-ERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAYVAGER 169 (519)
Q Consensus 95 ~~~~lgls~~~~~~~l~----~~vdiViH~Aa~v~f~-~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V~vSTa~v~~~~ 169 (519)
.+ .+..+.+. .++|+|||+||..... .+....+++|+.|+.+++++|++. +. +|||+||+++|+..
T Consensus 51 ~~-------~~~~~~~~~~~~~~~D~vvh~A~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~-~~-~~v~~SS~~vy~~~ 121 (314)
T TIGR02197 51 DK-------EDFLDRLEKGAFGKIEAIFHQGACSDTTETDGEYMMENNYQYSKRLLDWCAEK-GI-PFIYASSAATYGDG 121 (314)
T ss_pred cc-------hhHHHHHHhhccCCCCEEEECccccCccccchHHHHHHHHHHHHHHHHHHHHh-CC-cEEEEccHHhcCCC
Confidence 73 33333444 4799999999975442 456677899999999999999986 55 79999999999864
Q ss_pred CCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcHHHHHHHHHHHHHHHh----
Q 010075 170 TGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLMQQS---- 245 (519)
Q Consensus 170 ~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~Y~~sK~~aE~lv~~~---- 245 (519)
.+...|+ .+ ...+.+.|+.||..+|.+++++
T Consensus 122 ~~~~~e~-----~~----------------------------------------~~~p~~~Y~~sK~~~e~~~~~~~~~~ 156 (314)
T TIGR02197 122 EAGFREG-----RE----------------------------------------LERPLNVYGYSKFLFDQYVRRRVLPE 156 (314)
T ss_pred CCCcccc-----cC----------------------------------------cCCCCCHHHHHHHHHHHHHHHHhHhh
Confidence 3222221 10 0135678999999999999864
Q ss_pred hcCCcEEEEecCccccCCCCCCCcccccccccHHHHHHhhcCCceeec------cCCCceeeeeeHHHHHHHHHHHHHHh
Q 010075 246 KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLV------GETKVIMDVIPVDMVVNAMIVAMVAH 319 (519)
Q Consensus 246 ~~~lp~~IvRPs~V~g~~~~p~~gw~~~~~~~~~~i~~~~~g~~~~~~------~~~~~~~d~vpVDdva~aii~a~~~~ 319 (519)
..+++++++||+.|||+...+..+. . .....++..+..|....+. +++++.++++||||+++++..++..
T Consensus 157 ~~~~~~~~lR~~~vyG~~~~~~~~~-~--~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~D~a~~i~~~~~~- 232 (314)
T TIGR02197 157 ALSAQVVGLRYFNVYGPREYHKGKM-A--SVAFHLFNQIKAGGNVKLFKSSEGFKDGEQLRDFVYVKDVVDVNLWLLEN- 232 (314)
T ss_pred ccCCceEEEEEeeccCCCCCCCCCc-c--cHHHHHHHHHhcCCCeEEecCccccCCCCceeeeEEHHHHHHHHHHHHhc-
Confidence 3467999999999999876332111 1 1222344555555544433 5678889999999999999999874
Q ss_pred ccCCCCCcEEEecCCCCCchhHHHHHHH
Q 010075 320 AKQPSDANIYHVGSSLRNPVTLGLQVAN 347 (519)
Q Consensus 320 ~~~~~~~~iyni~s~~~~~i~~~~~~~~ 347 (519)
. .+++||++++...++..+...+.
T Consensus 233 -~---~~~~yni~~~~~~s~~e~~~~i~ 256 (314)
T TIGR02197 233 -G---VSGIFNLGTGRARSFNDLADAVF 256 (314)
T ss_pred -c---cCceEEcCCCCCccHHHHHHHHH
Confidence 1 24699999987666544444443
|
This family consists of examples of ADP-L-glycero-D-mannoheptose-6-epimerase, an enzyme involved in biosynthesis of the inner core of lipopolysaccharide (LPS) for Gram-negative bacteria. This enzyme is homologous to UDP-glucose 4-epimerase (TIGR01179) and belongs to the NAD dependent epimerase/dehydratase family (pfam01370). |
| >PLN02725 GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductase | Back alignment and domain information |
|---|
Probab=99.94 E-value=2.3e-25 Score=224.94 Aligned_cols=231 Identities=17% Similarity=0.150 Sum_probs=158.4
Q ss_pred EEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEEeccCC
Q 010075 16 LVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVPGDIS 95 (519)
Q Consensus 16 lITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v~gDl~ 95 (519)
||||||||||++|++.|+..++ .|+++.+. ..+|++
T Consensus 1 lItGa~GfiG~~l~~~L~~~g~---~v~~~~~~-----------------------------------------~~~Dl~ 36 (306)
T PLN02725 1 FVAGHRGLVGSAIVRKLEALGF---TNLVLRTH-----------------------------------------KELDLT 36 (306)
T ss_pred CcccCCCcccHHHHHHHHhCCC---cEEEeecc-----------------------------------------ccCCCC
Confidence 6999999999999999999884 34433221 147887
Q ss_pred CCCCCCChhhhHHHHhc--CccEEEEcCccCCc----cccHHHHHHHhHHHHHHHHHHHHhccCCceEEEEecceeecCc
Q 010075 96 SEDLGLKDSNLKEELWN--ELDIMVNSAAITKF----DERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAYVAGER 169 (519)
Q Consensus 96 ~~~lgls~~~~~~~l~~--~vdiViH~Aa~v~f----~~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V~vSTa~v~~~~ 169 (519)
+ .+....+++ ++|+||||||.... ..+....++.|+.|+.+++++|++. ++++|||+||++||+..
T Consensus 37 ~-------~~~l~~~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~-~~~~~i~~SS~~vyg~~ 108 (306)
T PLN02725 37 R-------QADVEAFFAKEKPTYVILAAAKVGGIHANMTYPADFIRENLQIQTNVIDAAYRH-GVKKLLFLGSSCIYPKF 108 (306)
T ss_pred C-------HHHHHHHHhccCCCEEEEeeeeecccchhhhCcHHHHHHHhHHHHHHHHHHHHc-CCCeEEEeCceeecCCC
Confidence 4 333334444 58999999997542 2345567899999999999999996 78999999999999853
Q ss_pred CC-eeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCc-HHHHHHHHHHHHHHHh--
Q 010075 170 TG-LILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPN-TYVFTKTMGEMLMQQS-- 245 (519)
Q Consensus 170 ~~-~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n-~Y~~sK~~aE~lv~~~-- 245 (519)
.+ .++|... .+ ....+.+ .|+.||.++|++++.+
T Consensus 109 ~~~~~~E~~~-----~~-------------------------------------~~~~p~~~~Y~~sK~~~e~~~~~~~~ 146 (306)
T PLN02725 109 APQPIPETAL-----LT-------------------------------------GPPEPTNEWYAIAKIAGIKMCQAYRI 146 (306)
T ss_pred CCCCCCHHHh-----cc-------------------------------------CCCCCCcchHHHHHHHHHHHHHHHHH
Confidence 21 2222211 00 0012334 4999999999988876
Q ss_pred hcCCcEEEEecCccccCCCCCCCcccccccccHHHH----HHhhcCCceee-ccCCCceeeeeeHHHHHHHHHHHHHHhc
Q 010075 246 KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLF----VASAQGNLRCL-VGETKVIMDVIPVDMVVNAMIVAMVAHA 320 (519)
Q Consensus 246 ~~~lp~~IvRPs~V~g~~~~p~~gw~~~~~~~~~~i----~~~~~g~~~~~-~~~~~~~~d~vpVDdva~aii~a~~~~~ 320 (519)
..+++++++||+.|||+... ..+ .+......++ .+...|....+ ++++++.+++|||+|+|++++.++....
T Consensus 147 ~~~~~~~~~R~~~vyG~~~~-~~~--~~~~~~~~~i~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dv~~~~~~~~~~~~ 223 (306)
T PLN02725 147 QYGWDAISGMPTNLYGPHDN-FHP--ENSHVIPALIRRFHEAKANGAPEVVVWGSGSPLREFLHVDDLADAVVFLMRRYS 223 (306)
T ss_pred HhCCCEEEEEecceeCCCCC-CCC--CCCcccHHHHHHHHHHhhcCCCeEEEcCCCCeeeccccHHHHHHHHHHHHhccc
Confidence 45899999999999999742 111 0111122233 22334544444 7888999999999999999999886421
Q ss_pred cCCCCCcEEEecCCCCCchhHHHHHHH
Q 010075 321 KQPSDANIYHVGSSLRNPVTLGLQVAN 347 (519)
Q Consensus 321 ~~~~~~~iyni~s~~~~~i~~~~~~~~ 347 (519)
..+.||++++...++..+...+.
T Consensus 224 ----~~~~~ni~~~~~~s~~e~~~~i~ 246 (306)
T PLN02725 224 ----GAEHVNVGSGDEVTIKELAELVK 246 (306)
T ss_pred ----cCcceEeCCCCcccHHHHHHHHH
Confidence 13578999886655444444443
|
|
| >PLN02686 cinnamoyl-CoA reductase | Back alignment and domain information |
|---|
Probab=99.94 E-value=5e-25 Score=228.63 Aligned_cols=259 Identities=14% Similarity=0.122 Sum_probs=169.3
Q ss_pred cCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 010075 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (519)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (519)
+.+|+|||||||||||++|+++|++.| .+|++++|+... .+.+. + +.. .+. ......++.+
T Consensus 51 ~~~k~VLVTGatGfIG~~lv~~L~~~G---~~V~~~~r~~~~---~~~l~-~---------l~~-~~~--~~~~~~~~~~ 111 (367)
T PLN02686 51 AEARLVCVTGGVSFLGLAIVDRLLRHG---YSVRIAVDTQED---KEKLR-E---------MEM-FGE--MGRSNDGIWT 111 (367)
T ss_pred CCCCEEEEECCchHHHHHHHHHHHHCC---CEEEEEeCCHHH---HHHHH-H---------Hhh-hcc--ccccCCceEE
Confidence 568999999999999999999999998 577888886422 11111 0 000 000 0000135788
Q ss_pred EeccCCCCCCCCChhhhHHHHhcCccEEEEcCccCCccc---cHHHHHHHhHHHHHHHHHHHHhccCCceEEEEecc--e
Q 010075 90 VPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKFDE---RYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTA--Y 164 (519)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~~~vdiViH~Aa~v~f~~---~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V~vSTa--~ 164 (519)
+.+|+++ .+....+++++|.|||+|+.+.... ......++|+.|+.+++++|++..++++|||+||. .
T Consensus 112 v~~Dl~d-------~~~l~~~i~~~d~V~hlA~~~~~~~~~~~~~~~~~~nv~gt~~llea~~~~~~v~r~V~~SS~~~~ 184 (367)
T PLN02686 112 VMANLTE-------PESLHEAFDGCAGVFHTSAFVDPAGLSGYTKSMAELEAKASENVIEACVRTESVRKCVFTSSLLAC 184 (367)
T ss_pred EEcCCCC-------HHHHHHHHHhccEEEecCeeecccccccccchhhhhhHHHHHHHHHHHHhcCCccEEEEeccHHHh
Confidence 9999995 3334467778999999999864322 22455788999999999999986579999999996 4
Q ss_pred eecCc--C---CeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcHHHHHHHHHH
Q 010075 165 VAGER--T---GLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGE 239 (519)
Q Consensus 165 v~~~~--~---~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~Y~~sK~~aE 239 (519)
+|+.. . ..++|. .+.+.+ ....+.+.|+.||..+|
T Consensus 185 vyg~~~~~~~~~~i~E~-----~~~~~~-----------------------------------~~~~p~~~Y~~sK~~~E 224 (367)
T PLN02686 185 VWRQNYPHDLPPVIDEE-----SWSDES-----------------------------------FCRDNKLWYALGKLKAE 224 (367)
T ss_pred cccccCCCCCCcccCCC-----CCCChh-----------------------------------hcccccchHHHHHHHHH
Confidence 66531 1 112222 111100 01134567999999999
Q ss_pred HHHHHh--hcCCcEEEEecCccccCCCCCCCcccccccccHHHHHHhhcCCceeeccCCCceeeeeeHHHHHHHHHHHHH
Q 010075 240 MLMQQS--KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMIVAMV 317 (519)
Q Consensus 240 ~lv~~~--~~~lp~~IvRPs~V~g~~~~p~~gw~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~d~vpVDdva~aii~a~~ 317 (519)
++++.+ ..+++++++||+.|||+...+. .+.. +..+..|.. .+++++ ..+++||||+|++++.++.
T Consensus 225 ~~~~~~~~~~gl~~v~lRp~~vyGp~~~~~--------~~~~-~~~~~~g~~-~~~g~g--~~~~v~V~Dva~A~~~al~ 292 (367)
T PLN02686 225 KAAWRAARGKGLKLATICPALVTGPGFFRR--------NSTA-TIAYLKGAQ-EMLADG--LLATADVERLAEAHVCVYE 292 (367)
T ss_pred HHHHHHHHhcCceEEEEcCCceECCCCCCC--------CChh-HHHHhcCCC-ccCCCC--CcCeEEHHHHHHHHHHHHh
Confidence 999876 4589999999999999965221 1111 223444542 344544 4579999999999999986
Q ss_pred HhccCCCCCcEEEecCCCCCchhHHHHHHHH
Q 010075 318 AHAKQPSDANIYHVGSSLRNPVTLGLQVANT 348 (519)
Q Consensus 318 ~~~~~~~~~~iyni~s~~~~~i~~~~~~~~~ 348 (519)
...... .+++| ++++...++..++..+..
T Consensus 293 ~~~~~~-~~~~y-i~~g~~~s~~e~~~~i~~ 321 (367)
T PLN02686 293 AMGNKT-AFGRY-ICFDHVVSREDEAEELAR 321 (367)
T ss_pred ccCCCC-CCCcE-EEeCCCccHHHHHHHHHH
Confidence 321111 24678 778766665444444433
|
|
| >TIGR03443 alpha_am_amid L-aminoadipate-semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=99.94 E-value=4e-25 Score=265.74 Aligned_cols=286 Identities=22% Similarity=0.340 Sum_probs=193.6
Q ss_pred CCEEEEeCCccHHHHHHHHHHHHhC-CCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEE
Q 010075 12 NKTILVSGVTGFVAKVFIEKILRVQ-PNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFV 90 (519)
Q Consensus 12 ~k~VlITGaTGFlG~~Lv~~LL~~g-~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v 90 (519)
.++|||||||||+|+++++.|++.+ ....+|++++|+.......+|+.+.+....++ .....++++++
T Consensus 971 ~~~VlvTGatGflG~~l~~~Ll~~~~~~~~~V~~l~R~~~~~~~~~~l~~~~~~~~~~-----------~~~~~~~i~~~ 1039 (1389)
T TIGR03443 971 PITVFLTGATGFLGSFILRDLLTRRSNSNFKVFAHVRAKSEEAGLERLRKTGTTYGIW-----------DEEWASRIEVV 1039 (1389)
T ss_pred CceEEEeCCccccHHHHHHHHHhcCCCCCcEEEEEECcCChHHHHHHHHHHHHHhCCC-----------chhhhcceEEE
Confidence 4799999999999999999999876 23468999999887666666665322111110 11113579999
Q ss_pred eccCCCCCCCCChhhhHHHHhcCccEEEEcCccCCccccHHHHHHHhHHHHHHHHHHHHhccCCceEEEEecceeecCcC
Q 010075 91 PGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKFDERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAYVAGERT 170 (519)
Q Consensus 91 ~gDl~~~~lgls~~~~~~~l~~~vdiViH~Aa~v~f~~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V~vSTa~v~~~~~ 170 (519)
.||++++.+|+++..+ ..+..++|+|||+||.+++..++......|+.||.+++++|.+. ++++|+|+||..+++...
T Consensus 1040 ~gDl~~~~lgl~~~~~-~~l~~~~d~iiH~Aa~~~~~~~~~~~~~~nv~gt~~ll~~a~~~-~~~~~v~vSS~~v~~~~~ 1117 (1389)
T TIGR03443 1040 LGDLSKEKFGLSDEKW-SDLTNEVDVIIHNGALVHWVYPYSKLRDANVIGTINVLNLCAEG-KAKQFSFVSSTSALDTEY 1117 (1389)
T ss_pred eccCCCccCCcCHHHH-HHHHhcCCEEEECCcEecCccCHHHHHHhHHHHHHHHHHHHHhC-CCceEEEEeCeeecCccc
Confidence 9999999999987776 47778999999999999988888888889999999999999986 788999999999986421
Q ss_pred C-eeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcHHHHHHHHHHHHHHHh-hcC
Q 010075 171 G-LILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLMQQS-KEN 248 (519)
Q Consensus 171 ~-~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~Y~~sK~~aE~lv~~~-~~~ 248 (519)
- ...+....+... +.+|+.. . ......+.++|+.||+++|.++..+ ..+
T Consensus 1118 ~~~~~~~~~~~~~~--------------------~~~e~~~--------~-~~~~~~~~~~Y~~sK~~aE~l~~~~~~~g 1168 (1389)
T TIGR03443 1118 YVNLSDELVQAGGA--------------------GIPESDD--------L-MGSSKGLGTGYGQSKWVAEYIIREAGKRG 1168 (1389)
T ss_pred ccchhhhhhhccCC--------------------CCCcccc--------c-ccccccCCCChHHHHHHHHHHHHHHHhCC
Confidence 0 000000000000 0000000 0 0001145678999999999999877 458
Q ss_pred CcEEEEecCccccCCCCCCCcccccccccHHHHHHh-hcCCceeeccCCCceeeeeeHHHHHHHHHHHHHHhccCCCCCc
Q 010075 249 LSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVAS-AQGNLRCLVGETKVIMDVIPVDMVVNAMIVAMVAHAKQPSDAN 327 (519)
Q Consensus 249 lp~~IvRPs~V~g~~~~p~~gw~~~~~~~~~~i~~~-~~g~~~~~~~~~~~~~d~vpVDdva~aii~a~~~~~~~~~~~~ 327 (519)
++++|+||+.|+|+...+ .|... .....++... ..|. ..+....+|++||||||++++.++..... .....
T Consensus 1169 ~~~~i~Rpg~v~G~~~~g--~~~~~-~~~~~~~~~~~~~~~----~p~~~~~~~~~~Vddva~ai~~~~~~~~~-~~~~~ 1240 (1389)
T TIGR03443 1169 LRGCIVRPGYVTGDSKTG--ATNTD-DFLLRMLKGCIQLGL----IPNINNTVNMVPVDHVARVVVAAALNPPK-ESELA 1240 (1389)
T ss_pred CCEEEECCCccccCCCcC--CCCch-hHHHHHHHHHHHhCC----cCCCCCccccccHHHHHHHHHHHHhCCcc-cCCCC
Confidence 999999999999986532 12111 1112222221 1122 23445678999999999999998864321 12346
Q ss_pred EEEecCCCCCchhHHHHHHH
Q 010075 328 IYHVGSSLRNPVTLGLQVAN 347 (519)
Q Consensus 328 iyni~s~~~~~i~~~~~~~~ 347 (519)
+||++++...++..++..+.
T Consensus 1241 i~~~~~~~~~~~~~~~~~l~ 1260 (1389)
T TIGR03443 1241 VAHVTGHPRIRFNDFLGTLK 1260 (1389)
T ss_pred EEEeCCCCCCcHHHHHHHHH
Confidence 99998875555444444443
|
Members of this protein family are L-aminoadipate-semialdehyde dehydrogenase (EC 1.2.1.31), product of the LYS2 gene. It is also called alpha-aminoadipate reductase. In fungi, lysine is synthesized via aminoadipate. Currently, all members of this family are fungal. |
| >PLN02896 cinnamyl-alcohol dehydrogenase | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.1e-24 Score=225.09 Aligned_cols=259 Identities=15% Similarity=0.249 Sum_probs=166.3
Q ss_pred CCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEE
Q 010075 11 ENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFV 90 (519)
Q Consensus 11 ~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v 90 (519)
++|+|||||||||||++++++|++.| .+|+++.|+... .+++.. ... . ..+++++
T Consensus 9 ~~~~vLVtG~~GfIG~~l~~~L~~~G---~~V~~~~r~~~~---~~~~~~-------------~~~----~--~~~~~~~ 63 (353)
T PLN02896 9 ATGTYCVTGATGYIGSWLVKLLLQRG---YTVHATLRDPAK---SLHLLS-------------KWK----E--GDRLRLF 63 (353)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCC---CEEEEEeCChHH---HHHHHH-------------hhc----c--CCeEEEE
Confidence 57899999999999999999999988 578888886422 111110 000 0 2468899
Q ss_pred eccCCCCCCCCChhhhHHHHhcCccEEEEcCccCCcc-----ccHHH-----HHHHhHHHHHHHHHHHHhccCCceEEEE
Q 010075 91 PGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKFD-----ERYDV-----AFGINTLGVIHLVNFAKKCVKLKVFVHV 160 (519)
Q Consensus 91 ~gDl~~~~lgls~~~~~~~l~~~vdiViH~Aa~v~f~-----~~~~~-----~~~~Nv~gt~~ll~~a~~~~~l~~~V~v 160 (519)
.+|+++ .+....+++++|+|||+||..... .+.+. .++.|+.|+.+++++|++..++++||++
T Consensus 64 ~~Dl~~-------~~~~~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~~~n~~~~~~~g~~~ll~~~~~~~~~~~~v~~ 136 (353)
T PLN02896 64 RADLQE-------EGSFDEAVKGCDGVFHVAASMEFDVSSDHNNIEEYVQSKVIDPAIKGTLNVLKSCLKSKTVKRVVFT 136 (353)
T ss_pred ECCCCC-------HHHHHHHHcCCCEEEECCccccCCccccccchhhhhhHHhHHHHHHHHHHHHHHHHhcCCccEEEEE
Confidence 999995 333456777899999999986432 23333 3455679999999999886458899999
Q ss_pred ecceeecCcC------CeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcHHHHH
Q 010075 161 STAYVAGERT------GLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFT 234 (519)
Q Consensus 161 STa~v~~~~~------~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~Y~~s 234 (519)
||..+|+... ..++|... .+++ .. .....+...|+.|
T Consensus 137 SS~~vyg~~~~~~~~~~~~~E~~~---~p~~--~~--------------------------------~~~~~~~~~Y~~s 179 (353)
T PLN02896 137 SSISTLTAKDSNGRWRAVVDETCQ---TPID--HV--------------------------------WNTKASGWVYVLS 179 (353)
T ss_pred echhhccccccCCCCCCccCcccC---CcHH--Hh--------------------------------hccCCCCccHHHH
Confidence 9999998432 11222210 0100 00 0001233479999
Q ss_pred HHHHHHHHHHh--hcCCcEEEEecCccccCCCCC-CCcccccccccHHHHHHhhcCCce--eeccC---CCceeeeeeHH
Q 010075 235 KTMGEMLMQQS--KENLSLVIIRPTVVSGTYKEP-FPGWVEDLKTINTLFVASAQGNLR--CLVGE---TKVIMDVIPVD 306 (519)
Q Consensus 235 K~~aE~lv~~~--~~~lp~~IvRPs~V~g~~~~p-~~gw~~~~~~~~~~i~~~~~g~~~--~~~~~---~~~~~d~vpVD 306 (519)
|.++|++++.+ ..+++++++||+.|||+...+ ++.++. .+.....|... ...+. ....+||||||
T Consensus 180 K~~~E~~~~~~~~~~~~~~~~lR~~~vyGp~~~~~~~~~~~-------~~~~~~~g~~~~~~~~~~~~~~~~~~dfi~v~ 252 (353)
T PLN02896 180 KLLTEEAAFKYAKENGIDLVSVITTTVAGPFLTPSVPSSIQ-------VLLSPITGDSKLFSILSAVNSRMGSIALVHIE 252 (353)
T ss_pred HHHHHHHHHHHHHHcCCeEEEEcCCcccCCCcCCCCCchHH-------HHHHHhcCCccccccccccccccCceeEEeHH
Confidence 99999999987 458999999999999997643 122211 11111223211 11111 11246999999
Q ss_pred HHHHHHHHHHHHhccCCCCCcEEEecCCCCCchhHHHHHHHHHH
Q 010075 307 MVVNAMIVAMVAHAKQPSDANIYHVGSSLRNPVTLGLQVANTVF 350 (519)
Q Consensus 307 dva~aii~a~~~~~~~~~~~~iyni~s~~~~~i~~~~~~~~~~~ 350 (519)
|+|++++.++.... . ..+|++ ++...++..++..+...+
T Consensus 253 Dva~a~~~~l~~~~--~--~~~~~~-~~~~~s~~el~~~i~~~~ 291 (353)
T PLN02896 253 DICDAHIFLMEQTK--A--EGRYIC-CVDSYDMSELINHLSKEY 291 (353)
T ss_pred HHHHHHHHHHhCCC--c--CccEEe-cCCCCCHHHHHHHHHHhC
Confidence 99999999986321 1 246865 555555555555554433
|
|
| >PLN02583 cinnamoyl-CoA reductase | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.5e-24 Score=218.75 Aligned_cols=240 Identities=12% Similarity=0.084 Sum_probs=159.6
Q ss_pred CCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEE
Q 010075 11 ENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFV 90 (519)
Q Consensus 11 ~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v 90 (519)
.+++|+|||||||||++++++|++.| ++|++++|+.......+.+. . +. + ...+++++
T Consensus 5 ~~k~vlVTGatG~IG~~lv~~Ll~~G---~~V~~~~R~~~~~~~~~~~~-~---------l~---~------~~~~~~~~ 62 (297)
T PLN02583 5 SSKSVCVMDASGYVGFWLVKRLLSRG---YTVHAAVQKNGETEIEKEIR-G---------LS---C------EEERLKVF 62 (297)
T ss_pred CCCEEEEECCCCHHHHHHHHHHHhCC---CEEEEEEcCchhhhHHHHHH-h---------cc---c------CCCceEEE
Confidence 36899999999999999999999998 67888898643221111111 0 00 0 02468899
Q ss_pred eccCCCCCCCCChhhhHHHHhcCccEEEEcCccCCc-cccHHHHHHHhHHHHHHHHHHHHhccCCceEEEEecceeecCc
Q 010075 91 PGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF-DERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAYVAGER 169 (519)
Q Consensus 91 ~gDl~~~~lgls~~~~~~~l~~~vdiViH~Aa~v~f-~~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V~vSTa~v~~~~ 169 (519)
.+|+++ .+.....+.++|.|+|+++.... ....+..+++|+.|+.+++++|.+..+++++|++||..++...
T Consensus 63 ~~Dl~d-------~~~~~~~l~~~d~v~~~~~~~~~~~~~~~~~~~~nv~gt~~ll~aa~~~~~v~riV~~SS~~a~~~~ 135 (297)
T PLN02583 63 DVDPLD-------YHSILDALKGCSGLFCCFDPPSDYPSYDEKMVDVEVRAAHNVLEACAQTDTIEKVVFTSSLTAVIWR 135 (297)
T ss_pred EecCCC-------HHHHHHHHcCCCEEEEeCccCCcccccHHHHHHHHHHHHHHHHHHHHhcCCccEEEEecchHheecc
Confidence 999995 33334677889999998866432 2345778999999999999999886467899999998654311
Q ss_pred -CCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcHHHHHHHHHHHHHHHh--h
Q 010075 170 -TGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLMQQS--K 246 (519)
Q Consensus 170 -~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~Y~~sK~~aE~lv~~~--~ 246 (519)
.+...+.+++|+.+.++... ......|+.||.++|++++++ .
T Consensus 136 ~~~~~~~~~~~E~~~~~~~~~-----------------------------------~~~~~~Y~~sK~~aE~~~~~~~~~ 180 (297)
T PLN02583 136 DDNISTQKDVDERSWSDQNFC-----------------------------------RKFKLWHALAKTLSEKTAWALAMD 180 (297)
T ss_pred cccCCCCCCCCcccCCCHHHH-----------------------------------hhcccHHHHHHHHHHHHHHHHHHH
Confidence 11111223333332221100 012246999999999999876 4
Q ss_pred cCCcEEEEecCccccCCCCCCCcccccccccHHHHHHhhcCCceeeccCCCceeeeeeHHHHHHHHHHHHHHhccCCCCC
Q 010075 247 ENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMIVAMVAHAKQPSDA 326 (519)
Q Consensus 247 ~~lp~~IvRPs~V~g~~~~p~~gw~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~d~vpVDdva~aii~a~~~~~~~~~~~ 326 (519)
.+++++++||+.|+|+...+.. . ...+... ... ....++|+|||||++++.|+.... . .
T Consensus 181 ~gi~~v~lrp~~v~Gp~~~~~~----------~----~~~~~~~-~~~--~~~~~~v~V~Dva~a~~~al~~~~--~--~ 239 (297)
T PLN02583 181 RGVNMVSINAGLLMGPSLTQHN----------P----YLKGAAQ-MYE--NGVLVTVDVNFLVDAHIRAFEDVS--S--Y 239 (297)
T ss_pred hCCcEEEEcCCcccCCCCCCch----------h----hhcCCcc-cCc--ccCcceEEHHHHHHHHHHHhcCcc--c--C
Confidence 5899999999999998653210 0 1112111 111 234679999999999999997332 1 3
Q ss_pred cEEEecCCC
Q 010075 327 NIYHVGSSL 335 (519)
Q Consensus 327 ~iyni~s~~ 335 (519)
+.|+|+++.
T Consensus 240 ~r~~~~~~~ 248 (297)
T PLN02583 240 GRYLCFNHI 248 (297)
T ss_pred CcEEEecCC
Confidence 469888763
|
|
| >KOG1429 consensus dTDP-glucose 4-6-dehydratase/UDP-glucuronic acid decarboxylase [Carbohydrate transport and metabolism; Cell wall/membrane/envelope biogenesis] | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.3e-25 Score=213.04 Aligned_cols=247 Identities=16% Similarity=0.197 Sum_probs=186.1
Q ss_pred CCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEE
Q 010075 11 ENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFV 90 (519)
Q Consensus 11 ~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v 90 (519)
.+++|+||||.||||++|+++|+..| ++|+++.--..+... .+. .-+....++.+
T Consensus 26 ~~lrI~itGgaGFIgSHLvdkLm~eg---h~VIa~Dn~ftg~k~--n~~--------------------~~~~~~~fel~ 80 (350)
T KOG1429|consen 26 QNLRILITGGAGFIGSHLVDKLMTEG---HEVIALDNYFTGRKE--NLE--------------------HWIGHPNFELI 80 (350)
T ss_pred CCcEEEEecCcchHHHHHHHHHHhcC---CeEEEEecccccchh--hcc--------------------hhccCcceeEE
Confidence 45899999999999999999999998 566776543322110 000 00112456667
Q ss_pred eccCCCCCCCCChhhhHHHHhcCccEEEEcCccCC---ccccHHHHHHHhHHHHHHHHHHHHhccCCceEEEEecceeec
Q 010075 91 PGDISSEDLGLKDSNLKEELWNELDIMVNSAAITK---FDERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAYVAG 167 (519)
Q Consensus 91 ~gDl~~~~lgls~~~~~~~l~~~vdiViH~Aa~v~---f~~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V~vSTa~v~~ 167 (519)
.-|+.. .++.++|.|+|+||..+ +..+.-..+.+|+.||.+++.+|++. + ++|+|.||+.|||
T Consensus 81 ~hdv~~------------pl~~evD~IyhLAapasp~~y~~npvktIktN~igtln~lglakrv-~-aR~l~aSTseVYg 146 (350)
T KOG1429|consen 81 RHDVVE------------PLLKEVDQIYHLAAPASPPHYKYNPVKTIKTNVIGTLNMLGLAKRV-G-ARFLLASTSEVYG 146 (350)
T ss_pred Eeechh------------HHHHHhhhhhhhccCCCCcccccCccceeeecchhhHHHHHHHHHh-C-ceEEEeecccccC
Confidence 777763 46678999999999864 55666677999999999999999996 3 8999999999999
Q ss_pred CcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcHHHHHHHHHHHHHHHh--
Q 010075 168 ERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLMQQS-- 245 (519)
Q Consensus 168 ~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~Y~~sK~~aE~lv~~~-- 245 (519)
++. +.+..++...+ ..+.++...|...|.++|.++..|
T Consensus 147 dp~----~hpq~e~ywg~------------------------------------vnpigpr~cydegKr~aE~L~~~y~k 186 (350)
T KOG1429|consen 147 DPL----VHPQVETYWGN------------------------------------VNPIGPRSCYDEGKRVAETLCYAYHK 186 (350)
T ss_pred Ccc----cCCCccccccc------------------------------------cCcCCchhhhhHHHHHHHHHHHHhhc
Confidence 854 23332222222 123367789999999999999998
Q ss_pred hcCCcEEEEecCccccCCCCCCCcccccccccHHHHHHhhcCCceeeccCCCceeeeeeHHHHHHHHHHHHHHhccCCCC
Q 010075 246 KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMIVAMVAHAKQPSD 325 (519)
Q Consensus 246 ~~~lp~~IvRPs~V~g~~~~p~~gw~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~d~vpVDdva~aii~a~~~~~~~~~~ 325 (519)
..++.+.|.|+.++|||... |.+. ..+..++.+..++...+++|+|.+.+.|.+|+|++++++.++......
T Consensus 187 ~~giE~rIaRifNtyGPrm~----~~dg-rvvsnf~~q~lr~epltv~g~G~qtRSF~yvsD~Vegll~Lm~s~~~~--- 258 (350)
T KOG1429|consen 187 QEGIEVRIARIFNTYGPRMH----MDDG-RVVSNFIAQALRGEPLTVYGDGKQTRSFQYVSDLVEGLLRLMESDYRG--- 258 (350)
T ss_pred ccCcEEEEEeeecccCCccc----cCCC-hhhHHHHHHHhcCCCeEEEcCCcceEEEEeHHHHHHHHHHHhcCCCcC---
Confidence 56899999999999998653 3332 455667888899999999999999999999999999999999765432
Q ss_pred CcEEEecCCCCCchhHHHHHH
Q 010075 326 ANIYHVGSSLRNPVTLGLQVA 346 (519)
Q Consensus 326 ~~iyni~s~~~~~i~~~~~~~ 346 (519)
-+|++++...++..+...+
T Consensus 259 --pvNiGnp~e~Tm~elAemv 277 (350)
T KOG1429|consen 259 --PVNIGNPGEFTMLELAEMV 277 (350)
T ss_pred --CcccCCccceeHHHHHHHH
Confidence 2899998776655444433
|
|
| >TIGR03589 PseB UDP-N-acetylglucosamine 4,6-dehydratase | Back alignment and domain information |
|---|
Probab=99.93 E-value=2.3e-24 Score=220.06 Aligned_cols=227 Identities=20% Similarity=0.218 Sum_probs=163.8
Q ss_pred cCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 010075 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (519)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (519)
++||+|||||||||||++++++|++.+. ..+|+++.|..... ..+.+ +.+ ..++.+
T Consensus 2 ~~~k~vLVTGatG~IG~~l~~~L~~~g~-~~~V~~~~r~~~~~---~~~~~-------------~~~-------~~~~~~ 57 (324)
T TIGR03589 2 FNNKSILITGGTGSFGKAFISRLLENYN-PKKIIIYSRDELKQ---WEMQQ-------------KFP-------APCLRF 57 (324)
T ss_pred cCCCEEEEeCCCCHHHHHHHHHHHHhCC-CcEEEEEcCChhHH---HHHHH-------------HhC-------CCcEEE
Confidence 5789999999999999999999999862 25788888764321 11111 000 146889
Q ss_pred EeccCCCCCCCCChhhhHHHHhcCccEEEEcCccCCc---cccHHHHHHHhHHHHHHHHHHHHhccCCceEEEEecceee
Q 010075 90 VPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF---DERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAYVA 166 (519)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~~~vdiViH~Aa~v~f---~~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V~vSTa~v~ 166 (519)
+.+|+++ .+....+++++|+|||+||.... ..+....+++|+.|+.+++++|++. ++++||++||....
T Consensus 58 v~~Dl~d-------~~~l~~~~~~iD~Vih~Ag~~~~~~~~~~~~~~~~~Nv~g~~~ll~aa~~~-~~~~iV~~SS~~~~ 129 (324)
T TIGR03589 58 FIGDVRD-------KERLTRALRGVDYVVHAAALKQVPAAEYNPFECIRTNINGAQNVIDAAIDN-GVKRVVALSTDKAA 129 (324)
T ss_pred EEccCCC-------HHHHHHHHhcCCEEEECcccCCCchhhcCHHHHHHHHHHHHHHHHHHHHHc-CCCEEEEEeCCCCC
Confidence 9999995 34445677889999999997542 2345678999999999999999985 78899999995210
Q ss_pred cCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcHHHHHHHHHHHHHHHh-
Q 010075 167 GERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLMQQS- 245 (519)
Q Consensus 167 ~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~Y~~sK~~aE~lv~~~- 245 (519)
.+.++|+.||+.+|+++..+
T Consensus 130 -----------------------------------------------------------~p~~~Y~~sK~~~E~l~~~~~ 150 (324)
T TIGR03589 130 -----------------------------------------------------------NPINLYGATKLASDKLFVAAN 150 (324)
T ss_pred -----------------------------------------------------------CCCCHHHHHHHHHHHHHHHHH
Confidence 23467999999999998753
Q ss_pred ----hcCCcEEEEecCccccCCCCCCCcccccccccHHHHHHhhcCC-ceeeccCCCceeeeeeHHHHHHHHHHHHHHhc
Q 010075 246 ----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGN-LRCLVGETKVIMDVIPVDMVVNAMIVAMVAHA 320 (519)
Q Consensus 246 ----~~~lp~~IvRPs~V~g~~~~p~~gw~~~~~~~~~~i~~~~~g~-~~~~~~~~~~~~d~vpVDdva~aii~a~~~~~ 320 (519)
..+++++++||+.|+|+.. ..+..+......|. ...+ ++++..+||+||+|+|++++.++....
T Consensus 151 ~~~~~~gi~~~~lR~g~v~G~~~----------~~i~~~~~~~~~~~~~~~i-~~~~~~r~~i~v~D~a~a~~~al~~~~ 219 (324)
T TIGR03589 151 NISGSKGTRFSVVRYGNVVGSRG----------SVVPFFKSLKEEGVTELPI-TDPRMTRFWITLEQGVNFVLKSLERML 219 (324)
T ss_pred hhccccCcEEEEEeecceeCCCC----------CcHHHHHHHHHhCCCCeee-CCCCceEeeEEHHHHHHHHHHHHhhCC
Confidence 3589999999999999743 12223333444454 2333 467788999999999999999987421
Q ss_pred cCCCCCcEEEecCCCCCchhHHH
Q 010075 321 KQPSDANIYHVGSSLRNPVTLGL 343 (519)
Q Consensus 321 ~~~~~~~iyni~s~~~~~i~~~~ 343 (519)
.+++|+ +++...++..++
T Consensus 220 ----~~~~~~-~~~~~~sv~el~ 237 (324)
T TIGR03589 220 ----GGEIFV-PKIPSMKITDLA 237 (324)
T ss_pred ----CCCEEc-cCCCcEEHHHHH
Confidence 246884 666555544333
|
This enzyme catalyzes the first step in the biosynthesis of pseudaminic acid, the conversion of UDP-N-acetylglucosamine to UDP-4-keto-6-deoxy-N-acetylglucosamine. These sequences are members of the broader pfam01073 (3-beta hydroxysteroid dehydrogenase/isomerase family) family. |
| >PRK10675 UDP-galactose-4-epimerase; Provisional | Back alignment and domain information |
|---|
Probab=99.93 E-value=5.2e-24 Score=218.41 Aligned_cols=259 Identities=18% Similarity=0.237 Sum_probs=170.8
Q ss_pred CEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEEec
Q 010075 13 KTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVPG 92 (519)
Q Consensus 13 k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v~g 92 (519)
|+|+|||||||||++|++.|++.| .+|+++.|...... ..+. .+.+ . ...++.++.+
T Consensus 1 m~vlVtGatG~iG~~l~~~L~~~g---~~V~~~~~~~~~~~--~~~~----------~~~~-~-------~~~~~~~~~~ 57 (338)
T PRK10675 1 MRVLVTGGSGYIGSHTCVQLLQNG---HDVVILDNLCNSKR--SVLP----------VIER-L-------GGKHPTFVEG 57 (338)
T ss_pred CeEEEECCCChHHHHHHHHHHHCC---CeEEEEecCCCchH--hHHH----------HHHH-h-------cCCCceEEEc
Confidence 579999999999999999999988 56777766432221 1110 0000 0 0135678899
Q ss_pred cCCCCCCCCChhhhHHHHhc--CccEEEEcCccCCcc---ccHHHHHHHhHHHHHHHHHHHHhccCCceEEEEecceeec
Q 010075 93 DISSEDLGLKDSNLKEELWN--ELDIMVNSAAITKFD---ERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAYVAG 167 (519)
Q Consensus 93 Dl~~~~lgls~~~~~~~l~~--~vdiViH~Aa~v~f~---~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V~vSTa~v~~ 167 (519)
|+++ .+....++. ++|+|||+|+..... +.....+++|+.++.+++++|++. ++++||++||+.+|+
T Consensus 58 Dl~d-------~~~~~~~~~~~~~d~vvh~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~~v~~Ss~~~yg 129 (338)
T PRK10675 58 DIRN-------EALLTEILHDHAIDTVIHFAGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAA-NVKNLIFSSSATVYG 129 (338)
T ss_pred cCCC-------HHHHHHHHhcCCCCEEEECCccccccchhhCHHHHHHHHHHHHHHHHHHHHHc-CCCEEEEeccHHhhC
Confidence 9995 333334443 699999999976532 345677899999999999999986 788999999999998
Q ss_pred CcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcHHHHHHHHHHHHHHHh--
Q 010075 168 ERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLMQQS-- 245 (519)
Q Consensus 168 ~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~Y~~sK~~aE~lv~~~-- 245 (519)
...+ .+++|+.+. ..+.+.|+.+|..+|++++.+
T Consensus 130 ~~~~----~~~~E~~~~----------------------------------------~~p~~~Y~~sK~~~E~~~~~~~~ 165 (338)
T PRK10675 130 DQPK----IPYVESFPT----------------------------------------GTPQSPYGKSKLMVEQILTDLQK 165 (338)
T ss_pred CCCC----CccccccCC----------------------------------------CCCCChhHHHHHHHHHHHHHHHH
Confidence 5421 122221211 134578999999999999876
Q ss_pred -hcCCcEEEEecCccccCCCCCCCccccc--ccccHHHHHHhhcCC--ceeecc------CCCceeeeeeHHHHHHHHHH
Q 010075 246 -KENLSLVIIRPTVVSGTYKEPFPGWVED--LKTINTLFVASAQGN--LRCLVG------ETKVIMDVIPVDMVVNAMIV 314 (519)
Q Consensus 246 -~~~lp~~IvRPs~V~g~~~~p~~gw~~~--~~~~~~~i~~~~~g~--~~~~~~------~~~~~~d~vpVDdva~aii~ 314 (519)
..+++++++|++.|||+.....-|--+. .......+..+..+. ...+.+ ++.+.+|+|||+|+|++++.
T Consensus 166 ~~~~~~~~ilR~~~v~g~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~v~v~D~a~~~~~ 245 (338)
T PRK10675 166 AQPDWSIALLRYFNPVGAHPSGDMGEDPQGIPNNLMPYIAQVAVGRRDSLAIFGNDYPTEDGTGVRDYIHVMDLADGHVA 245 (338)
T ss_pred hcCCCcEEEEEeeeecCCCcccccccCCCCChhHHHHHHHHHHhcCCCceEEeCCcCCCCCCcEEEeeEEHHHHHHHHHH
Confidence 2478999999999999742111000000 011222334343332 122222 56789999999999999999
Q ss_pred HHHHhccCCCCCcEEEecCCCCCchhHHHHHHH
Q 010075 315 AMVAHAKQPSDANIYHVGSSLRNPVTLGLQVAN 347 (519)
Q Consensus 315 a~~~~~~~~~~~~iyni~s~~~~~i~~~~~~~~ 347 (519)
++...... ..+++||++++...++..+...+.
T Consensus 246 ~~~~~~~~-~~~~~~ni~~~~~~s~~e~~~~i~ 277 (338)
T PRK10675 246 AMEKLANK-PGVHIYNLGAGVGSSVLDVVNAFS 277 (338)
T ss_pred HHHhhhcc-CCCceEEecCCCceeHHHHHHHHH
Confidence 88642111 124799999987666555544443
|
|
| >TIGR01214 rmlD dTDP-4-dehydrorhamnose reductase | Back alignment and domain information |
|---|
Probab=99.93 E-value=5.2e-24 Score=213.29 Aligned_cols=221 Identities=20% Similarity=0.245 Sum_probs=158.5
Q ss_pred EEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEEecc
Q 010075 14 TILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVPGD 93 (519)
Q Consensus 14 ~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v~gD 93 (519)
+|||||||||+|++++++|++.| ++|+++.|+ .+|
T Consensus 1 kilv~G~tG~iG~~l~~~l~~~g---~~v~~~~r~------------------------------------------~~d 35 (287)
T TIGR01214 1 RILITGANGQLGRELVQQLSPEG---RVVVALTSS------------------------------------------QLD 35 (287)
T ss_pred CEEEEcCCCHHHHHHHHHHHhcC---CEEEEeCCc------------------------------------------ccC
Confidence 48999999999999999999988 567777763 346
Q ss_pred CCCCCCCCChhhhHHHHhcC--ccEEEEcCccCCcc---ccHHHHHHHhHHHHHHHHHHHHhccCCceEEEEecceeecC
Q 010075 94 ISSEDLGLKDSNLKEELWNE--LDIMVNSAAITKFD---ERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAYVAGE 168 (519)
Q Consensus 94 l~~~~lgls~~~~~~~l~~~--vdiViH~Aa~v~f~---~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V~vSTa~v~~~ 168 (519)
+.+ .+.....+++ +|+|||+|+..... ......+++|+.|+.+++++|++. +. +|||+||.++|+.
T Consensus 36 ~~~-------~~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~-~~v~~Ss~~vy~~ 106 (287)
T TIGR01214 36 LTD-------PEALERLLRAIRPDAVVNTAAYTDVDGAESDPEKAFAVNALAPQNLARAAARH-GA-RLVHISTDYVFDG 106 (287)
T ss_pred CCC-------HHHHHHHHHhCCCCEEEECCccccccccccCHHHHHHHHHHHHHHHHHHHHHc-CC-eEEEEeeeeeecC
Confidence 663 2323345554 69999999976543 345677899999999999999986 43 8999999999975
Q ss_pred cCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcHHHHHHHHHHHHHHHhhcC
Q 010075 169 RTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLMQQSKEN 248 (519)
Q Consensus 169 ~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~Y~~sK~~aE~lv~~~~~~ 248 (519)
.. +.++.|+.+. .+.+.|+.+|..+|++++.+ +
T Consensus 107 ~~----~~~~~E~~~~-----------------------------------------~~~~~Y~~~K~~~E~~~~~~--~ 139 (287)
T TIGR01214 107 EG----KRPYREDDAT-----------------------------------------NPLNVYGQSKLAGEQAIRAA--G 139 (287)
T ss_pred CC----CCCCCCCCCC-----------------------------------------CCcchhhHHHHHHHHHHHHh--C
Confidence 32 2233322221 34578999999999999875 6
Q ss_pred CcEEEEecCccccCCCCCCCcccccccccHHHHHHhhcCCceeeccCCCceeeeeeHHHHHHHHHHHHHHhccCCCCCcE
Q 010075 249 LSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMIVAMVAHAKQPSDANI 328 (519)
Q Consensus 249 lp~~IvRPs~V~g~~~~p~~gw~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~d~vpVDdva~aii~a~~~~~~~~~~~~i 328 (519)
++++|+||++|||+.... +....++..+..+....+.+ +...+++++||+|++++.++..... .+++
T Consensus 140 ~~~~ilR~~~v~G~~~~~--------~~~~~~~~~~~~~~~~~~~~--~~~~~~v~v~Dva~a~~~~~~~~~~---~~~~ 206 (287)
T TIGR01214 140 PNALIVRTSWLYGGGGGR--------NFVRTMLRLAGRGEELRVVD--DQIGSPTYAKDLARVIAALLQRLAR---ARGV 206 (287)
T ss_pred CCeEEEEeeecccCCCCC--------CHHHHHHHHhhcCCCceEec--CCCcCCcCHHHHHHHHHHHHhhccC---CCCe
Confidence 799999999999987410 12333444444444333333 4678999999999999999864311 2579
Q ss_pred EEecCCCCCchhHHHHHHHH
Q 010075 329 YHVGSSLRNPVTLGLQVANT 348 (519)
Q Consensus 329 yni~s~~~~~i~~~~~~~~~ 348 (519)
||++++...++..+...+..
T Consensus 207 ~ni~~~~~~s~~e~~~~i~~ 226 (287)
T TIGR01214 207 YHLANSGQCSWYEFAQAIFE 226 (287)
T ss_pred EEEECCCCcCHHHHHHHHHH
Confidence 99999866554445554443
|
This enzyme catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS core antigen, O-antigen, etc. |
| >COG1086 Predicted nucleoside-diphosphate sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.92 E-value=2.5e-23 Score=215.97 Aligned_cols=237 Identities=22% Similarity=0.255 Sum_probs=190.6
Q ss_pred CCcchhhhcCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccc
Q 010075 2 ELGSVVEFLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNS 81 (519)
Q Consensus 2 ~~~~i~~~~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~ 81 (519)
|++.+..++.||+|+||||||-+|+.+++++++.+| ++|+++.|+..+....+ ..+++.+|
T Consensus 240 d~~~i~~~~~gK~vLVTGagGSiGsel~~qil~~~p--~~i~l~~~~E~~~~~i~------------~el~~~~~----- 300 (588)
T COG1086 240 DTELIGAMLTGKTVLVTGGGGSIGSELCRQILKFNP--KEIILFSRDEYKLYLID------------MELREKFP----- 300 (588)
T ss_pred CHHHHHhHcCCCEEEEeCCCCcHHHHHHHHHHhcCC--CEEEEecCchHHHHHHH------------HHHHhhCC-----
Confidence 345688999999999999999999999999999876 89999999875432221 12333333
Q ss_pred ccCCceEEEeccCCCCCCCCChhhhHHHHhcC--ccEEEEcCccCCc---cccHHHHHHHhHHHHHHHHHHHHhccCCce
Q 010075 82 FISEKITFVPGDISSEDLGLKDSNLKEELWNE--LDIMVNSAAITKF---DERYDVAFGINTLGVIHLVNFAKKCVKLKV 156 (519)
Q Consensus 82 ~~~~~v~~v~gDl~~~~lgls~~~~~~~l~~~--vdiViH~Aa~v~f---~~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~ 156 (519)
..++.++-||+. +.+..+.+.++ +|+|||.||.-+. ..++.+++++||.||+|++++|.++ ++++
T Consensus 301 --~~~~~~~igdVr-------D~~~~~~~~~~~kvd~VfHAAA~KHVPl~E~nP~Eai~tNV~GT~nv~~aa~~~-~V~~ 370 (588)
T COG1086 301 --ELKLRFYIGDVR-------DRDRVERAMEGHKVDIVFHAAALKHVPLVEYNPEEAIKTNVLGTENVAEAAIKN-GVKK 370 (588)
T ss_pred --CcceEEEecccc-------cHHHHHHHHhcCCCceEEEhhhhccCcchhcCHHHHHHHhhHhHHHHHHHHHHh-CCCE
Confidence 378999999999 66667788887 9999999998653 5788999999999999999999997 9999
Q ss_pred EEEEecceeecCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcHHHHHHH
Q 010075 157 FVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKT 236 (519)
Q Consensus 157 ~V~vSTa~v~~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~Y~~sK~ 236 (519)
||.+||..+. .|.|.||.||.
T Consensus 371 ~V~iSTDKAV-----------------------------------------------------------~PtNvmGaTKr 391 (588)
T COG1086 371 FVLISTDKAV-----------------------------------------------------------NPTNVMGATKR 391 (588)
T ss_pred EEEEecCccc-----------------------------------------------------------CCchHhhHHHH
Confidence 9999996332 56899999999
Q ss_pred HHHHHHHHhhc-----CCcEEEEecCccccCCCCCCCcccccccccHHHHHHhhcCCceeeccCCCceeeeeeHHHHHHH
Q 010075 237 MGEMLMQQSKE-----NLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNA 311 (519)
Q Consensus 237 ~aE~lv~~~~~-----~lp~~IvRPs~V~g~~~~p~~gw~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~d~vpVDdva~a 311 (519)
+||.++..+.. +-.++++|.|+|.|....- ++-+...+.+|...++ .+++-.+=|+-+.+.|+.
T Consensus 392 ~aE~~~~a~~~~~~~~~T~f~~VRFGNVlGSrGSV----------iPlFk~QI~~GgplTv-Tdp~mtRyfMTI~EAv~L 460 (588)
T COG1086 392 LAEKLFQAANRNVSGTGTRFCVVRFGNVLGSRGSV----------IPLFKKQIAEGGPLTV-TDPDMTRFFMTIPEAVQL 460 (588)
T ss_pred HHHHHHHHHhhccCCCCcEEEEEEecceecCCCCC----------HHHHHHHHHcCCCccc-cCCCceeEEEEHHHHHHH
Confidence 99999998732 4789999999999987632 3334456777766555 588899999999999999
Q ss_pred HHHHHHHhccCCCCCcEEEecCCCCCchhH
Q 010075 312 MIVAMVAHAKQPSDANIYHVGSSLRNPVTL 341 (519)
Q Consensus 312 ii~a~~~~~~~~~~~~iyni~s~~~~~i~~ 341 (519)
++.|+.... .+++|-+--|++.++..
T Consensus 461 VlqA~a~~~----gGeifvldMGepvkI~d 486 (588)
T COG1086 461 VLQAGAIAK----GGEIFVLDMGEPVKIID 486 (588)
T ss_pred HHHHHhhcC----CCcEEEEcCCCCeEHHH
Confidence 999987422 37899998887766443
|
|
| >TIGR03466 HpnA hopanoid-associated sugar epimerase | Back alignment and domain information |
|---|
Probab=99.92 E-value=4.2e-23 Score=210.23 Aligned_cols=241 Identities=18% Similarity=0.238 Sum_probs=168.7
Q ss_pred CEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEEec
Q 010075 13 KTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVPG 92 (519)
Q Consensus 13 k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v~g 92 (519)
|+|+|||||||||+++++.|++.| .+|+++.|+..... .+ ...+++++.+
T Consensus 1 ~~vlItG~~G~iG~~l~~~L~~~g---~~V~~~~r~~~~~~---~~------------------------~~~~~~~~~~ 50 (328)
T TIGR03466 1 MKVLVTGATGFVGSAVVRLLLEQG---EEVRVLVRPTSDRR---NL------------------------EGLDVEIVEG 50 (328)
T ss_pred CeEEEECCccchhHHHHHHHHHCC---CEEEEEEecCcccc---cc------------------------ccCCceEEEe
Confidence 579999999999999999999988 67899999754321 00 0136889999
Q ss_pred cCCCCCCCCChhhhHHHHhcCccEEEEcCccCCc-cccHHHHHHHhHHHHHHHHHHHHhccCCceEEEEecceeecCcCC
Q 010075 93 DISSEDLGLKDSNLKEELWNELDIMVNSAAITKF-DERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAYVAGERTG 171 (519)
Q Consensus 93 Dl~~~~lgls~~~~~~~l~~~vdiViH~Aa~v~f-~~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V~vSTa~v~~~~~~ 171 (519)
|+++ .+....+++++|+|||+|+.... .+.....+++|+.|+.+++++|++. ++++||++||.++++....
T Consensus 51 D~~~-------~~~l~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~~v~~SS~~~~~~~~~ 122 (328)
T TIGR03466 51 DLRD-------PASLRKAVAGCRALFHVAADYRLWAPDPEEMYAANVEGTRNLLRAALEA-GVERVVYTSSVATLGVRGD 122 (328)
T ss_pred eCCC-------HHHHHHHHhCCCEEEEeceecccCCCCHHHHHHHHHHHHHHHHHHHHHh-CCCeEEEEechhhcCcCCC
Confidence 9995 34445777889999999987543 3456788999999999999999985 7899999999999985211
Q ss_pred eeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcHHHHHHHHHHHHHHHh--hcCC
Q 010075 172 LILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLMQQS--KENL 249 (519)
Q Consensus 172 ~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~Y~~sK~~aE~lv~~~--~~~l 249 (519)
+.+++|+.+..+ ....+.|+.+|.++|++++++ ..++
T Consensus 123 ---~~~~~e~~~~~~--------------------------------------~~~~~~Y~~sK~~~e~~~~~~~~~~~~ 161 (328)
T TIGR03466 123 ---GTPADETTPSSL--------------------------------------DDMIGHYKRSKFLAEQAALEMAAEKGL 161 (328)
T ss_pred ---CCCcCccCCCCc--------------------------------------ccccChHHHHHHHHHHHHHHHHHhcCC
Confidence 112222222110 122457999999999999987 3589
Q ss_pred cEEEEecCccccCCCCCCCcccccccccHHHHHHhhcCCceeeccCCCceeeeeeHHHHHHHHHHHHHHhccCCCCCcEE
Q 010075 250 SLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMIVAMVAHAKQPSDANIY 329 (519)
Q Consensus 250 p~~IvRPs~V~g~~~~p~~gw~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~d~vpVDdva~aii~a~~~~~~~~~~~~iy 329 (519)
+++++||+.+||+..... .....++.....+...... +...+++|++|+|++++.++.... .+.+|
T Consensus 162 ~~~ilR~~~~~G~~~~~~-------~~~~~~~~~~~~~~~~~~~---~~~~~~i~v~D~a~a~~~~~~~~~----~~~~~ 227 (328)
T TIGR03466 162 PVVIVNPSTPIGPRDIKP-------TPTGRIIVDFLNGKMPAYV---DTGLNLVHVDDVAEGHLLALERGR----IGERY 227 (328)
T ss_pred CEEEEeCCccCCCCCCCC-------CcHHHHHHHHHcCCCceee---CCCcceEEHHHHHHHHHHHHhCCC----CCceE
Confidence 999999999999865211 1112233333333333222 234689999999999999886421 25688
Q ss_pred EecCCCCCchhHHHHHHH
Q 010075 330 HVGSSLRNPVTLGLQVAN 347 (519)
Q Consensus 330 ni~s~~~~~i~~~~~~~~ 347 (519)
|++ +...++..+...+.
T Consensus 228 ~~~-~~~~s~~e~~~~i~ 244 (328)
T TIGR03466 228 ILG-GENLTLKQILDKLA 244 (328)
T ss_pred Eec-CCCcCHHHHHHHHH
Confidence 885 55555554554443
|
The sequences in this family are members of the pfam01370 superfamily of NAD-dependent epimerases and dehydratases typically acting on nucleotide-sugar substrates. The genes of the family modeled here are generally in the same locus with genes involved in the biosynthesis and elaboration of hopene, the cyclization product of the polyisoprenoid squalene. |
| >TIGR01179 galE UDP-glucose-4-epimerase | Back alignment and domain information |
|---|
Probab=99.92 E-value=9e-23 Score=207.38 Aligned_cols=255 Identities=20% Similarity=0.289 Sum_probs=169.2
Q ss_pred EEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEEecc
Q 010075 14 TILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVPGD 93 (519)
Q Consensus 14 ~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v~gD 93 (519)
+|||||||||||+.++++|++.+ .+|+++.|...... +++. .+ .. ..+++++.+|
T Consensus 1 kvlV~GatG~iG~~l~~~l~~~g---~~V~~~~~~~~~~~--~~~~-~~-----------------~~--~~~~~~~~~D 55 (328)
T TIGR01179 1 KILVTGGAGYIGSHTVRQLLESG---HEVVVLDNLSNGSP--EALK-RG-----------------ER--ITRVTFVEGD 55 (328)
T ss_pred CEEEeCCCCHHHHHHHHHHHhCC---CeEEEEeCCCccch--hhhh-hh-----------------cc--ccceEEEECC
Confidence 58999999999999999999988 46676655432211 1111 00 00 0257788999
Q ss_pred CCCCCCCCChhhhHHHHhc--CccEEEEcCccCCcc---ccHHHHHHHhHHHHHHHHHHHHhccCCceEEEEecceeecC
Q 010075 94 ISSEDLGLKDSNLKEELWN--ELDIMVNSAAITKFD---ERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAYVAGE 168 (519)
Q Consensus 94 l~~~~lgls~~~~~~~l~~--~vdiViH~Aa~v~f~---~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V~vSTa~v~~~ 168 (519)
+++ .+..+.+++ ++|+|||+||..... ......+..|+.++.+++++|.+. ++++||++||.++++.
T Consensus 56 ~~~-------~~~~~~~~~~~~~d~vv~~ag~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~~v~~ss~~~~g~ 127 (328)
T TIGR01179 56 LRD-------RELLDRLFEEHKIDAVIHFAGLIAVGESVQDPLKYYRNNVVNTLNLLEAMQQT-GVKKFIFSSSAAVYGE 127 (328)
T ss_pred CCC-------HHHHHHHHHhCCCcEEEECccccCcchhhcCchhhhhhhHHHHHHHHHHHHhc-CCCEEEEecchhhcCC
Confidence 995 332334443 699999999976432 244567889999999999999886 6789999999999875
Q ss_pred cCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcHHHHHHHHHHHHHHHh--h
Q 010075 169 RTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLMQQS--K 246 (519)
Q Consensus 169 ~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~Y~~sK~~aE~lv~~~--~ 246 (519)
..+ .++.|+.+. .+.+.|+.+|+.+|.+++.+ .
T Consensus 128 ~~~----~~~~e~~~~-----------------------------------------~~~~~y~~sK~~~e~~~~~~~~~ 162 (328)
T TIGR01179 128 PSS----IPISEDSPL-----------------------------------------GPINPYGRSKLMSERILRDLSKA 162 (328)
T ss_pred CCC----CCccccCCC-----------------------------------------CCCCchHHHHHHHHHHHHHHHHh
Confidence 432 112221111 34578999999999999876 2
Q ss_pred -cCCcEEEEecCccccCCCCCCCccccc-ccccHHHHHHhhcC--Cceeec------cCCCceeeeeeHHHHHHHHHHHH
Q 010075 247 -ENLSLVIIRPTVVSGTYKEPFPGWVED-LKTINTLFVASAQG--NLRCLV------GETKVIMDVIPVDMVVNAMIVAM 316 (519)
Q Consensus 247 -~~lp~~IvRPs~V~g~~~~p~~gw~~~-~~~~~~~i~~~~~g--~~~~~~------~~~~~~~d~vpVDdva~aii~a~ 316 (519)
.+++++|+||+.|||+..++..++... ...+...+.....| ....+. ++++...++||++|+++++..++
T Consensus 163 ~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~v~~~D~a~~~~~~~ 242 (328)
T TIGR01179 163 DPGLSYVILRYFNVAGADPEGTIGEDPPGITHLIPYACQVAVGKRDKLTIFGTDYPTPDGTCVRDYIHVMDLADAHLAAL 242 (328)
T ss_pred ccCCCEEEEecCcccCCCCCCccccCCcccchHHHHHHHHHHhCCCCeEEeCCcccCCCCceEEeeeeHHHHHHHHHHHH
Confidence 689999999999999976544333211 11111112222221 111121 35677899999999999999998
Q ss_pred HHhccCCCCCcEEEecCCCCCchhHHHHHHH
Q 010075 317 VAHAKQPSDANIYHVGSSLRNPVTLGLQVAN 347 (519)
Q Consensus 317 ~~~~~~~~~~~iyni~s~~~~~i~~~~~~~~ 347 (519)
...... ..+++||++++...++..++..+.
T Consensus 243 ~~~~~~-~~~~~~n~~~~~~~s~~ei~~~~~ 272 (328)
T TIGR01179 243 EYLLNG-GESHVYNLGYGQGFSVLEVIEAFK 272 (328)
T ss_pred hhhhcC-CCcceEEcCCCCcccHHHHHHHHH
Confidence 753221 235799999986655444444433
|
This enzyme interconverts UDP-glucose and UDP-galactose. A set of related proteins, some of which are tentatively identified as UDP-glucose-4-epimerase in Thermotoga maritima, Bacillus halodurans, and several archaea, but deeply branched from this set and lacking experimental evidence, are excluded from this model and described separately. |
| >CHL00194 ycf39 Ycf39; Provisional | Back alignment and domain information |
|---|
Probab=99.91 E-value=3.9e-23 Score=210.33 Aligned_cols=219 Identities=12% Similarity=0.089 Sum_probs=157.5
Q ss_pred CEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEEec
Q 010075 13 KTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVPG 92 (519)
Q Consensus 13 k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v~g 92 (519)
|+|||||||||+|++|++.|++.| ++|.+++|+.... ..+. ..+++++.|
T Consensus 1 MkIlVtGatG~iG~~lv~~Ll~~g---~~V~~l~R~~~~~---~~l~------------------------~~~v~~v~~ 50 (317)
T CHL00194 1 MSLLVIGATGTLGRQIVRQALDEG---YQVRCLVRNLRKA---SFLK------------------------EWGAELVYG 50 (317)
T ss_pred CEEEEECCCcHHHHHHHHHHHHCC---CeEEEEEcChHHh---hhHh------------------------hcCCEEEEC
Confidence 589999999999999999999988 6789999974321 1111 146889999
Q ss_pred cCCCCCCCCChhhhHHHHhcCccEEEEcCccCCccccHHHHHHHhHHHHHHHHHHHHhccCCceEEEEecceeecCcCCe
Q 010075 93 DISSEDLGLKDSNLKEELWNELDIMVNSAAITKFDERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAYVAGERTGL 172 (519)
Q Consensus 93 Dl~~~~lgls~~~~~~~l~~~vdiViH~Aa~v~f~~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V~vSTa~v~~~~~~~ 172 (519)
|+++ .+.....++++|+|||+++... .+.....++|+.|+.+++++|++. ++++|||+||..+..
T Consensus 51 Dl~d-------~~~l~~al~g~d~Vi~~~~~~~--~~~~~~~~~~~~~~~~l~~aa~~~-gvkr~I~~Ss~~~~~----- 115 (317)
T CHL00194 51 DLSL-------PETLPPSFKGVTAIIDASTSRP--SDLYNAKQIDWDGKLALIEAAKAA-KIKRFIFFSILNAEQ----- 115 (317)
T ss_pred CCCC-------HHHHHHHHCCCCEEEECCCCCC--CCccchhhhhHHHHHHHHHHHHHc-CCCEEEEeccccccc-----
Confidence 9995 3334577789999999986432 233456788999999999999996 899999999853211
Q ss_pred eecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcHHHHHHHHHHHHHHHhhcCCcEE
Q 010075 173 ILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLMQQSKENLSLV 252 (519)
Q Consensus 173 i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~Y~~sK~~aE~lv~~~~~~lp~~ 252 (519)
....+|..+|..+|+++++ .+++++
T Consensus 116 -----------------------------------------------------~~~~~~~~~K~~~e~~l~~--~~l~~t 140 (317)
T CHL00194 116 -----------------------------------------------------YPYIPLMKLKSDIEQKLKK--SGIPYT 140 (317)
T ss_pred -----------------------------------------------------cCCChHHHHHHHHHHHHHH--cCCCeE
Confidence 0123578899999999876 689999
Q ss_pred EEecCccccCCCCCCCcccccccccHHHHHHhhcCCceeeccCCCceeeeeeHHHHHHHHHHHHHHhccCCCCCcEEEec
Q 010075 253 IIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMIVAMVAHAKQPSDANIYHVG 332 (519)
Q Consensus 253 IvRPs~V~g~~~~p~~gw~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~d~vpVDdva~aii~a~~~~~~~~~~~~iyni~ 332 (519)
|+||+.+++..-. ........+.... ..++...+++|+++|+|+++..++..... .+++||++
T Consensus 141 ilRp~~~~~~~~~-------------~~~~~~~~~~~~~-~~~~~~~~~~i~v~Dva~~~~~~l~~~~~---~~~~~ni~ 203 (317)
T CHL00194 141 IFRLAGFFQGLIS-------------QYAIPILEKQPIW-ITNESTPISYIDTQDAAKFCLKSLSLPET---KNKTFPLV 203 (317)
T ss_pred EEeecHHhhhhhh-------------hhhhhhccCCceE-ecCCCCccCccCHHHHHHHHHHHhcCccc---cCcEEEec
Confidence 9999987753210 0011111222222 24456678999999999999988864221 36899999
Q ss_pred CCCCCchhHHHHHHHH
Q 010075 333 SSLRNPVTLGLQVANT 348 (519)
Q Consensus 333 s~~~~~i~~~~~~~~~ 348 (519)
++...++..++..+..
T Consensus 204 g~~~~s~~el~~~~~~ 219 (317)
T CHL00194 204 GPKSWNSSEIISLCEQ 219 (317)
T ss_pred CCCccCHHHHHHHHHH
Confidence 9877776666655543
|
|
| >PF04321 RmlD_sub_bind: RmlD substrate binding domain; InterPro: IPR005913 dTDP-4-dehydrorhamnose reductase (1 | Back alignment and domain information |
|---|
Probab=99.91 E-value=5.3e-23 Score=206.15 Aligned_cols=214 Identities=22% Similarity=0.277 Sum_probs=143.6
Q ss_pred CEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEEec
Q 010075 13 KTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVPG 92 (519)
Q Consensus 13 k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v~g 92 (519)
|+|||||||||||++|++.|.+.+ ..|+.+.|+ ..
T Consensus 1 MriLI~GasG~lG~~l~~~l~~~~---~~v~~~~r~------------------------------------------~~ 35 (286)
T PF04321_consen 1 MRILITGASGFLGSALARALKERG---YEVIATSRS------------------------------------------DL 35 (286)
T ss_dssp EEEEEETTTSHHHHHHHHHHTTTS---EEEEEESTT------------------------------------------CS
T ss_pred CEEEEECCCCHHHHHHHHHHhhCC---CEEEEeCch------------------------------------------hc
Confidence 689999999999999999999876 466666443 44
Q ss_pred cCCCCCCCCChhhhHHHHhc--CccEEEEcCccCCcc---ccHHHHHHHhHHHHHHHHHHHHhccCCceEEEEecceeec
Q 010075 93 DISSEDLGLKDSNLKEELWN--ELDIMVNSAAITKFD---ERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAYVAG 167 (519)
Q Consensus 93 Dl~~~~lgls~~~~~~~l~~--~vdiViH~Aa~v~f~---~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V~vSTa~v~~ 167 (519)
|++ +.+....+++ ++|+||||||....+ .+.+.+..+|+.++.+|.++|.+. + .++||+||.+|++
T Consensus 36 dl~-------d~~~~~~~~~~~~pd~Vin~aa~~~~~~ce~~p~~a~~iN~~~~~~la~~~~~~-~-~~li~~STd~VFd 106 (286)
T PF04321_consen 36 DLT-------DPEAVAKLLEAFKPDVVINCAAYTNVDACEKNPEEAYAINVDATKNLAEACKER-G-ARLIHISTDYVFD 106 (286)
T ss_dssp -TT-------SHHHHHHHHHHH--SEEEE------HHHHHHSHHHHHHHHTHHHHHHHHHHHHC-T--EEEEEEEGGGS-
T ss_pred CCC-------CHHHHHHHHHHhCCCeEeccceeecHHhhhhChhhhHHHhhHHHHHHHHHHHHc-C-CcEEEeeccEEEc
Confidence 666 3333334443 599999999987654 578899999999999999999985 4 4899999999996
Q ss_pred CcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcHHHHHHHHHHHHHHHhhc
Q 010075 168 ERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLMQQSKE 247 (519)
Q Consensus 168 ~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~Y~~sK~~aE~lv~~~~~ 247 (519)
...+ .+|.|+++. .|.|.||.+|..+|+.+++..+
T Consensus 107 G~~~----~~y~E~d~~-----------------------------------------~P~~~YG~~K~~~E~~v~~~~~ 141 (286)
T PF04321_consen 107 GDKG----GPYTEDDPP-----------------------------------------NPLNVYGRSKLEGEQAVRAACP 141 (286)
T ss_dssp SSTS----SSB-TTS---------------------------------------------SSHHHHHHHHHHHHHHHH-S
T ss_pred CCcc----cccccCCCC-----------------------------------------CCCCHHHHHHHHHHHHHHHhcC
Confidence 5432 234333322 4678999999999999998544
Q ss_pred CCcEEEEecCccccCCCCCCCcccccccccHHHHHHhhcCCceeeccCCCceeeeeeHHHHHHHHHHHHHHhccCCCCCc
Q 010075 248 NLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMIVAMVAHAKQPSDAN 327 (519)
Q Consensus 248 ~lp~~IvRPs~V~g~~~~p~~gw~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~d~vpVDdva~aii~a~~~~~~~~~~~~ 327 (519)
...|+|++.+||.... +....++.....|....+.. +.....++++|+|++++.++.+........+
T Consensus 142 --~~~IlR~~~~~g~~~~---------~~~~~~~~~~~~~~~i~~~~--d~~~~p~~~~dlA~~i~~l~~~~~~~~~~~G 208 (286)
T PF04321_consen 142 --NALILRTSWVYGPSGR---------NFLRWLLRRLRQGEPIKLFD--DQYRSPTYVDDLARVILELIEKNLSGASPWG 208 (286)
T ss_dssp --SEEEEEE-SEESSSSS---------SHHHHHHHHHHCTSEEEEES--SCEE--EEHHHHHHHHHHHHHHHHH-GGG-E
T ss_pred --CEEEEecceecccCCC---------chhhhHHHHHhcCCeeEeeC--CceeCCEEHHHHHHHHHHHHHhcccccccce
Confidence 7999999999998432 23344556666676655544 5788999999999999999987653222357
Q ss_pred EEEecCCCCCc
Q 010075 328 IYHVGSSLRNP 338 (519)
Q Consensus 328 iyni~s~~~~~ 338 (519)
+||++++...+
T Consensus 209 iyh~~~~~~~S 219 (286)
T PF04321_consen 209 IYHLSGPERVS 219 (286)
T ss_dssp EEE---BS-EE
T ss_pred eEEEecCcccC
Confidence 99999985544
|
1.1.133 from EC) catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS molecules such as core antigen and O-antigen. |
| >PF02719 Polysacc_synt_2: Polysaccharide biosynthesis protein; InterPro: IPR003869 This domain is found in diverse bacterial polysaccharide biosynthesis proteins including the CapD protein from Staphylococcus aureus [], the WalL protein, mannosyl-transferase [], and several putative epimerases | Back alignment and domain information |
|---|
Probab=99.91 E-value=1.5e-22 Score=198.63 Aligned_cols=228 Identities=21% Similarity=0.275 Sum_probs=157.0
Q ss_pred EEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEEeccC
Q 010075 15 ILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVPGDI 94 (519)
Q Consensus 15 VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v~gDl 94 (519)
||||||+|.||+.|+++|++.+| ++|+++.|+....- .++.+ +++..+. ..+...+.++.||+
T Consensus 1 VLVTGa~GSIGseL~rql~~~~p--~~lil~d~~E~~l~---~l~~~---------l~~~~~~---~~v~~~~~~vigDv 63 (293)
T PF02719_consen 1 VLVTGAGGSIGSELVRQLLRYGP--KKLILFDRDENKLY---ELERE---------LRSRFPD---PKVRFEIVPVIGDV 63 (293)
T ss_dssp EEEETTTSHHHHHHHHHHHCCB---SEEEEEES-HHHHH---HHHHH---------CHHHC-----TTCEEEEE--CTSC
T ss_pred CEEEccccHHHHHHHHHHHhcCC--CeEEEeCCChhHHH---HHHHH---------Hhhcccc---cCcccccCceeecc
Confidence 79999999999999999999877 78999999854322 22211 2222221 00112346779999
Q ss_pred CCCCCCCChhhhHHHHhc--CccEEEEcCccCCc---cccHHHHHHHhHHHHHHHHHHHHhccCCceEEEEecceeecCc
Q 010075 95 SSEDLGLKDSNLKEELWN--ELDIMVNSAAITKF---DERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAYVAGER 169 (519)
Q Consensus 95 ~~~~lgls~~~~~~~l~~--~vdiViH~Aa~v~f---~~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V~vSTa~v~~~~ 169 (519)
. +.+.+..+++ ++|+|||.||.-+. ...+.+++++|+.||++++++|.+. ++++||++||.-+.
T Consensus 64 r-------d~~~l~~~~~~~~pdiVfHaAA~KhVpl~E~~p~eav~tNv~GT~nv~~aa~~~-~v~~~v~ISTDKAv--- 132 (293)
T PF02719_consen 64 R-------DKERLNRIFEEYKPDIVFHAAALKHVPLMEDNPFEAVKTNVLGTQNVAEAAIEH-GVERFVFISTDKAV--- 132 (293)
T ss_dssp C-------HHHHHHHHTT--T-SEEEE------HHHHCCCHHHHHHHHCHHHHHHHHHHHHT-T-SEEEEEEECGCS---
T ss_pred c-------CHHHHHHHHhhcCCCEEEEChhcCCCChHHhCHHHHHHHHHHHHHHHHHHHHHc-CCCEEEEccccccC---
Confidence 9 6777778888 89999999998653 4678899999999999999999997 89999999997432
Q ss_pred CCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcHHHHHHHHHHHHHHHhhc--
Q 010075 170 TGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLMQQSKE-- 247 (519)
Q Consensus 170 ~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~Y~~sK~~aE~lv~~~~~-- 247 (519)
.|.|.||.||.++|+++..+..
T Consensus 133 --------------------------------------------------------~PtnvmGatKrlaE~l~~~~~~~~ 156 (293)
T PF02719_consen 133 --------------------------------------------------------NPTNVMGATKRLAEKLVQAANQYS 156 (293)
T ss_dssp --------------------------------------------------------S--SHHHHHHHHHHHHHHHHCCTS
T ss_pred --------------------------------------------------------CCCcHHHHHHHHHHHHHHHHhhhC
Confidence 4579999999999999998732
Q ss_pred ---CCcEEEEecCccccCCCCCCCcccccccccHHHHHHhhcCCceeeccCCCceeeeeeHHHHHHHHHHHHHHhccCCC
Q 010075 248 ---NLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMIVAMVAHAKQPS 324 (519)
Q Consensus 248 ---~lp~~IvRPs~V~g~~~~p~~gw~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~d~vpVDdva~aii~a~~~~~~~~~ 324 (519)
+..++++|.|+|.|+... .++.+...+.+|.+.++ .+++..+-|+-+++.++.++.|+....
T Consensus 157 ~~~~t~f~~VRFGNVlgS~GS----------Vip~F~~Qi~~g~PlTv-T~p~mtRffmti~EAv~Lvl~a~~~~~---- 221 (293)
T PF02719_consen 157 GNSDTKFSSVRFGNVLGSRGS----------VIPLFKKQIKNGGPLTV-TDPDMTRFFMTIEEAVQLVLQAAALAK---- 221 (293)
T ss_dssp SSS--EEEEEEE-EETTGTTS----------CHHHHHHHHHTTSSEEE-CETT-EEEEE-HHHHHHHHHHHHHH------
T ss_pred CCCCcEEEEEEecceecCCCc----------HHHHHHHHHHcCCccee-CCCCcEEEEecHHHHHHHHHHHHhhCC----
Confidence 468999999999998763 34445566777866665 467889999999999999999987532
Q ss_pred CCcEEEecCCCCCchhH
Q 010075 325 DANIYHVGSSLRNPVTL 341 (519)
Q Consensus 325 ~~~iyni~s~~~~~i~~ 341 (519)
.+++|-.--|.+..+..
T Consensus 222 ~geifvl~mg~~v~I~d 238 (293)
T PF02719_consen 222 GGEIFVLDMGEPVKILD 238 (293)
T ss_dssp TTEEEEE---TCEECCC
T ss_pred CCcEEEecCCCCcCHHH
Confidence 26799887776555433
|
The CapD protein is required for biosynthesis of type 1 capsular polysaccharide.; GO: 0009058 biosynthetic process; PDB: 3PVZ_C 2GN8_B 2GN4_A 2GNA_B 2GN6_A 2GN9_A. |
| >KOG1371 consensus UDP-glucose 4-epimerase/UDP-sulfoquinovose synthase [Cell wall/membrane/envelope biogenesis] | Back alignment and domain information |
|---|
Probab=99.91 E-value=6.4e-23 Score=199.54 Aligned_cols=258 Identities=21% Similarity=0.230 Sum_probs=185.9
Q ss_pred CCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEEe
Q 010075 12 NKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVP 91 (519)
Q Consensus 12 ~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v~ 91 (519)
+++||||||.||||+|.+-+|++.|++|--|.-+.|+- .....|+++ ..++ ..+|.+++
T Consensus 2 ~~~VLVtGgaGyiGsht~l~L~~~gy~v~~vDNl~n~~--~~sl~r~~~-------------l~~~------~~~v~f~~ 60 (343)
T KOG1371|consen 2 GKHVLVTGGAGYIGSHTVLALLKRGYGVVIVDNLNNSY--LESLKRVRQ-------------LLGE------GKSVFFVE 60 (343)
T ss_pred CcEEEEecCCcceehHHHHHHHhCCCcEEEEecccccc--hhHHHHHHH-------------hcCC------CCceEEEE
Confidence 68999999999999999999999997765454455543 233444442 1111 37899999
Q ss_pred ccCCCCCCCCChhhhHHHHhc--CccEEEEcCccCCcc---ccHHHHHHHhHHHHHHHHHHHHhccCCceEEEEecceee
Q 010075 92 GDISSEDLGLKDSNLKEELWN--ELDIMVNSAAITKFD---ERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAYVA 166 (519)
Q Consensus 92 gDl~~~~lgls~~~~~~~l~~--~vdiViH~Aa~v~f~---~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V~vSTa~v~ 166 (519)
+|+. +...++++++ ++|.|+|.||.-... +........|+.||.+||+.+++. +++.+|+.||+.+|
T Consensus 61 ~Dl~-------D~~~L~kvF~~~~fd~V~Hfa~~~~vgeS~~~p~~Y~~nNi~gtlnlLe~~~~~-~~~~~V~sssatvY 132 (343)
T KOG1371|consen 61 GDLN-------DAEALEKLFSEVKFDAVMHFAALAAVGESMENPLSYYHNNIAGTLNLLEVMKAH-NVKALVFSSSATVY 132 (343)
T ss_pred eccC-------CHHHHHHHHhhcCCceEEeehhhhccchhhhCchhheehhhhhHHHHHHHHHHc-CCceEEEecceeee
Confidence 9999 5566668876 599999999986543 344566889999999999999997 69999999999999
Q ss_pred cCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcHHHHHHHHHHHHHHHh-
Q 010075 167 GERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLMQQS- 245 (519)
Q Consensus 167 ~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~Y~~sK~~aE~lv~~~- 245 (519)
|... +-|++|..+.+ .+.|+|+.||...|.++..+
T Consensus 133 G~p~----~ip~te~~~t~----------------------------------------~p~~pyg~tK~~iE~i~~d~~ 168 (343)
T KOG1371|consen 133 GLPT----KVPITEEDPTD----------------------------------------QPTNPYGKTKKAIEEIIHDYN 168 (343)
T ss_pred cCcc----eeeccCcCCCC----------------------------------------CCCCcchhhhHHHHHHHHhhh
Confidence 9764 34555545442 36789999999999999987
Q ss_pred -hcCCcEEEEecCccccC--CC---CCCCcccccccccHHHHHHhhcCCc--ee------eccCCCceeeeeeHHHHHHH
Q 010075 246 -KENLSLVIIRPTVVSGT--YK---EPFPGWVEDLKTINTLFVASAQGNL--RC------LVGETKVIMDVIPVDMVVNA 311 (519)
Q Consensus 246 -~~~lp~~IvRPs~V~g~--~~---~p~~gw~~~~~~~~~~i~~~~~g~~--~~------~~~~~~~~~d~vpVDdva~a 311 (519)
...+.++++|.+.++|. +. ++..|...++. +.+.....|.. .. ...+|+.++|+|+|-|.|..
T Consensus 169 ~~~~~~~~~LRyfn~~ga~p~Gr~ge~p~~~~nnl~---p~v~~vaigr~~~l~v~g~d~~t~dgt~vrdyi~v~Dla~~ 245 (343)
T KOG1371|consen 169 KAYGWKVTGLRYFNVIGAHPSGRIGEAPLGIPNNLL---PYVFQVAIGRRPNLQVVGRDYTTIDGTIVRDYIHVLDLADG 245 (343)
T ss_pred ccccceEEEEEeccccCccccCccCCCCccCccccc---ccccchhhcccccceeecCcccccCCCeeecceeeEehHHH
Confidence 34588999999999993 32 22233333321 11222222221 11 12456899999999999999
Q ss_pred HHHHHHHhccCCCCCcEEEecCCCCCchhHHHHHH
Q 010075 312 MIVAMVAHAKQPSDANIYHVGSSLRNPVTLGLQVA 346 (519)
Q Consensus 312 ii~a~~~~~~~~~~~~iyni~s~~~~~i~~~~~~~ 346 (519)
.+.|+.+..... +..+||++++...++..++..+
T Consensus 246 h~~al~k~~~~~-~~~i~Nlgtg~g~~V~~lv~a~ 279 (343)
T KOG1371|consen 246 HVAALGKLRGAA-EFGVYNLGTGKGSSVLELVTAF 279 (343)
T ss_pred HHHHhhccccch-heeeEeecCCCCccHHHHHHHH
Confidence 999998765422 3569999999887755544433
|
|
| >PLN02778 3,5-epimerase/4-reductase | Back alignment and domain information |
|---|
Probab=99.90 E-value=3.8e-22 Score=201.25 Aligned_cols=218 Identities=12% Similarity=0.065 Sum_probs=142.8
Q ss_pred CCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEEe
Q 010075 12 NKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVP 91 (519)
Q Consensus 12 ~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v~ 91 (519)
.|+|||||||||||++|++.|++.|. +|+...
T Consensus 9 ~~kiLVtG~tGfiG~~l~~~L~~~g~---~V~~~~--------------------------------------------- 40 (298)
T PLN02778 9 TLKFLIYGKTGWIGGLLGKLCQEQGI---DFHYGS--------------------------------------------- 40 (298)
T ss_pred CCeEEEECCCCHHHHHHHHHHHhCCC---EEEEec---------------------------------------------
Confidence 48999999999999999999999884 443221
Q ss_pred ccCCCCCCCCChhhhHHHHh--cCccEEEEcCccCCc------cccHHHHHHHhHHHHHHHHHHHHhccCCceEEEEecc
Q 010075 92 GDISSEDLGLKDSNLKEELW--NELDIMVNSAAITKF------DERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTA 163 (519)
Q Consensus 92 gDl~~~~lgls~~~~~~~l~--~~vdiViH~Aa~v~f------~~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V~vSTa 163 (519)
+|+.+ .+.....+ .++|+|||+||.+.. ..+...++++|+.||.+++++|++. +++ ++++||.
T Consensus 41 ~~~~~-------~~~v~~~l~~~~~D~ViH~Aa~~~~~~~~~~~~~p~~~~~~Nv~gt~~ll~aa~~~-gv~-~v~~sS~ 111 (298)
T PLN02778 41 GRLEN-------RASLEADIDAVKPTHVFNAAGVTGRPNVDWCESHKVETIRANVVGTLTLADVCRER-GLV-LTNYATG 111 (298)
T ss_pred CccCC-------HHHHHHHHHhcCCCEEEECCcccCCCCchhhhhCHHHHHHHHHHHHHHHHHHHHHh-CCC-EEEEecc
Confidence 11211 11111111 268999999998642 2456778999999999999999996 675 6677887
Q ss_pred eeecCcCC-ee-ecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcHHHHHHHHHHHH
Q 010075 164 YVAGERTG-LI-LENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEML 241 (519)
Q Consensus 164 ~v~~~~~~-~i-~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~Y~~sK~~aE~l 241 (519)
.+|+.... .. +..+++|+.+. ..+.+.|+.||.++|.+
T Consensus 112 ~vy~~~~~~p~~~~~~~~Ee~~p----------------------------------------~~~~s~Yg~sK~~~E~~ 151 (298)
T PLN02778 112 CIFEYDDAHPLGSGIGFKEEDTP----------------------------------------NFTGSFYSKTKAMVEEL 151 (298)
T ss_pred eEeCCCCCCCcccCCCCCcCCCC----------------------------------------CCCCCchHHHHHHHHHH
Confidence 78764221 00 01112221110 12347899999999999
Q ss_pred HHHhhcCCcEEEEecCccccCCCCCCCcccccccccHHHHHHhhcCCceeeccCCCceeeeeeHHHHHHHHHHHHHHhcc
Q 010075 242 MQQSKENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMIVAMVAHAK 321 (519)
Q Consensus 242 v~~~~~~lp~~IvRPs~V~g~~~~p~~gw~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~d~vpVDdva~aii~a~~~~~~ 321 (519)
+..+. +..++|++++++.... ....++..+..+......+ .++++++|++++++.++...
T Consensus 152 ~~~y~---~~~~lr~~~~~~~~~~----------~~~~fi~~~~~~~~~~~~~-----~s~~yv~D~v~al~~~l~~~-- 211 (298)
T PLN02778 152 LKNYE---NVCTLRVRMPISSDLS----------NPRNFITKITRYEKVVNIP-----NSMTILDELLPISIEMAKRN-- 211 (298)
T ss_pred HHHhh---ccEEeeecccCCcccc----------cHHHHHHHHHcCCCeeEcC-----CCCEEHHHHHHHHHHHHhCC--
Confidence 98864 4678999887775321 1122445555554322222 27999999999999988531
Q ss_pred CCCCCcEEEecCCCCCchhHHHHHHHHH
Q 010075 322 QPSDANIYHVGSSLRNPVTLGLQVANTV 349 (519)
Q Consensus 322 ~~~~~~iyni~s~~~~~i~~~~~~~~~~ 349 (519)
. .++||++++...++..++..+...
T Consensus 212 -~--~g~yNigs~~~iS~~el~~~i~~~ 236 (298)
T PLN02778 212 -L--TGIYNFTNPGVVSHNEILEMYRDY 236 (298)
T ss_pred -C--CCeEEeCCCCcccHHHHHHHHHHH
Confidence 1 359999999776665565555443
|
|
| >PLN02657 3,8-divinyl protochlorophyllide a 8-vinyl reductase | Back alignment and domain information |
|---|
Probab=99.89 E-value=1e-21 Score=205.14 Aligned_cols=231 Identities=15% Similarity=0.150 Sum_probs=164.5
Q ss_pred cCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 010075 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (519)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (519)
.++++|+|||||||||+++++.|++.| .+|++++|+..+........ ++ .. ...++++
T Consensus 58 ~~~~kVLVtGatG~IG~~l~~~Ll~~G---~~V~~l~R~~~~~~~~~~~~-~~---------~~---------~~~~v~~ 115 (390)
T PLN02657 58 PKDVTVLVVGATGYIGKFVVRELVRRG---YNVVAVAREKSGIRGKNGKE-DT---------KK---------ELPGAEV 115 (390)
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCC---CEEEEEEechhhccccchhh-HH---------hh---------hcCCceE
Confidence 457899999999999999999999988 67899999764321100000 00 00 0246889
Q ss_pred EeccCCCCCCCCChhhhHHHHhc----CccEEEEcCccCCccccHHHHHHHhHHHHHHHHHHHHhccCCceEEEEeccee
Q 010075 90 VPGDISSEDLGLKDSNLKEELWN----ELDIMVNSAAITKFDERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAYV 165 (519)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~~----~vdiViH~Aa~v~f~~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V~vSTa~v 165 (519)
+.+|+++ .+....+++ ++|+||||++.... .....+++|+.++.+++++|++. ++++||++||.++
T Consensus 116 v~~Dl~d-------~~~l~~~~~~~~~~~D~Vi~~aa~~~~--~~~~~~~vn~~~~~~ll~aa~~~-gv~r~V~iSS~~v 185 (390)
T PLN02657 116 VFGDVTD-------ADSLRKVLFSEGDPVDVVVSCLASRTG--GVKDSWKIDYQATKNSLDAGREV-GAKHFVLLSAICV 185 (390)
T ss_pred EEeeCCC-------HHHHHHHHHHhCCCCcEEEECCccCCC--CCccchhhHHHHHHHHHHHHHHc-CCCEEEEEeeccc
Confidence 9999995 333345554 69999999986321 12344678999999999999986 8899999999875
Q ss_pred ecCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcHHHHHHHHHHHHHHHh
Q 010075 166 AGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLMQQS 245 (519)
Q Consensus 166 ~~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~Y~~sK~~aE~lv~~~ 245 (519)
+. +.+.|..+|..+|+.+...
T Consensus 186 ~~-----------------------------------------------------------p~~~~~~sK~~~E~~l~~~ 206 (390)
T PLN02657 186 QK-----------------------------------------------------------PLLEFQRAKLKFEAELQAL 206 (390)
T ss_pred cC-----------------------------------------------------------cchHHHHHHHHHHHHHHhc
Confidence 42 1235788999999988764
Q ss_pred hcCCcEEEEecCccccCCCCCCCcccccccccHHHHHHhhcCCceeeccCCCcee-eeeeHHHHHHHHHHHHHHhccCCC
Q 010075 246 KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIM-DVIPVDMVVNAMIVAMVAHAKQPS 324 (519)
Q Consensus 246 ~~~lp~~IvRPs~V~g~~~~p~~gw~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~-d~vpVDdva~aii~a~~~~~~~~~ 324 (519)
..+++++|+||+.+|+... ..+..+..|....+.++++..+ ++|+++|+|.+++.++.....
T Consensus 207 ~~gl~~tIlRp~~~~~~~~--------------~~~~~~~~g~~~~~~GdG~~~~~~~I~v~DlA~~i~~~~~~~~~--- 269 (390)
T PLN02657 207 DSDFTYSIVRPTAFFKSLG--------------GQVEIVKDGGPYVMFGDGKLCACKPISEADLASFIADCVLDESK--- 269 (390)
T ss_pred cCCCCEEEEccHHHhcccH--------------HHHHhhccCCceEEecCCcccccCceeHHHHHHHHHHHHhCccc---
Confidence 5689999999999997421 1233344566666778887644 689999999999998863221
Q ss_pred CCcEEEecCC-CCCchhHHHHHHHH
Q 010075 325 DANIYHVGSS-LRNPVTLGLQVANT 348 (519)
Q Consensus 325 ~~~iyni~s~-~~~~i~~~~~~~~~ 348 (519)
.+++||++++ ...++..+...+..
T Consensus 270 ~~~~~~Iggp~~~~S~~Eia~~l~~ 294 (390)
T PLN02657 270 INKVLPIGGPGKALTPLEQGEMLFR 294 (390)
T ss_pred cCCEEEcCCCCcccCHHHHHHHHHH
Confidence 2579999875 45666555555443
|
|
| >TIGR01777 yfcH conserved hypothetical protein TIGR01777 | Back alignment and domain information |
|---|
Probab=99.89 E-value=1.1e-21 Score=196.42 Aligned_cols=232 Identities=15% Similarity=0.112 Sum_probs=153.1
Q ss_pred EEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEEeccC
Q 010075 15 ILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVPGDI 94 (519)
Q Consensus 15 VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v~gDl 94 (519)
|||||||||||+++++.|++.| .+|++++|+........ ...+ .|+
T Consensus 1 vlVtGatG~iG~~l~~~L~~~g---~~V~~~~r~~~~~~~~~---------------------------~~~~----~~~ 46 (292)
T TIGR01777 1 ILITGGTGFIGRALTQRLTKDG---HEVTILTRSPPAGANTK---------------------------WEGY----KPW 46 (292)
T ss_pred CEEEcccchhhHHHHHHHHHcC---CEEEEEeCCCCCCCccc---------------------------ceee----ecc
Confidence 6999999999999999999988 68899999865431100 0011 111
Q ss_pred CCCCCCCChhhhHHHHhcCccEEEEcCccCCcc-----ccHHHHHHHhHHHHHHHHHHHHhccCC--ceEEEEecceeec
Q 010075 95 SSEDLGLKDSNLKEELWNELDIMVNSAAITKFD-----ERYDVAFGINTLGVIHLVNFAKKCVKL--KVFVHVSTAYVAG 167 (519)
Q Consensus 95 ~~~~lgls~~~~~~~l~~~vdiViH~Aa~v~f~-----~~~~~~~~~Nv~gt~~ll~~a~~~~~l--~~~V~vSTa~v~~ 167 (519)
. .... ...+.++|+|||+||..... +......++|+.++.+++++|++. +. ..|++.||.++|+
T Consensus 47 ~-------~~~~-~~~~~~~D~Vvh~a~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~-~~~~~~~i~~S~~~~yg 117 (292)
T TIGR01777 47 A-------PLAE-SEALEGADAVINLAGEPIADKRWTEERKQEIRDSRIDTTRALVEAIAAA-EQKPKVFISASAVGYYG 117 (292)
T ss_pred c-------ccch-hhhcCCCCEEEECCCCCcccccCCHHHHHHHHhcccHHHHHHHHHHHhc-CCCceEEEEeeeEEEeC
Confidence 1 1111 24456899999999976432 234566889999999999999986 44 4688888888888
Q ss_pred CcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcHHHHHHHHHHHHHHHh-h
Q 010075 168 ERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLMQQS-K 246 (519)
Q Consensus 168 ~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~Y~~sK~~aE~lv~~~-~ 246 (519)
...+ .++.|+.+. .+.+.|+..+...|..+... .
T Consensus 118 ~~~~----~~~~E~~~~-----------------------------------------~~~~~~~~~~~~~e~~~~~~~~ 152 (292)
T TIGR01777 118 TSED----RVFTEEDSP-----------------------------------------AGDDFLAELCRDWEEAAQAAED 152 (292)
T ss_pred CCCC----CCcCcccCC-----------------------------------------CCCChHHHHHHHHHHHhhhchh
Confidence 5431 122221110 12234566666677776654 4
Q ss_pred cCCcEEEEecCccccCCCCCCCcccccccccHHHHHHhhcCCceeeccCCCceeeeeeHHHHHHHHHHHHHHhccCCCCC
Q 010075 247 ENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMIVAMVAHAKQPSDA 326 (519)
Q Consensus 247 ~~lp~~IvRPs~V~g~~~~p~~gw~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~d~vpVDdva~aii~a~~~~~~~~~~~ 326 (519)
.+++++|+||+.|||+.. ++. ..++.....+. ....++++..+++|||||+|+++..++.... ..
T Consensus 153 ~~~~~~ilR~~~v~G~~~----~~~------~~~~~~~~~~~-~~~~g~~~~~~~~i~v~Dva~~i~~~l~~~~----~~ 217 (292)
T TIGR01777 153 LGTRVVLLRTGIVLGPKG----GAL------AKMLPPFRLGL-GGPLGSGRQWFSWIHIEDLVQLILFALENAS----IS 217 (292)
T ss_pred cCCceEEEeeeeEECCCc----chh------HHHHHHHhcCc-ccccCCCCcccccEeHHHHHHHHHHHhcCcc----cC
Confidence 579999999999999853 111 11111111111 1124778899999999999999999986322 23
Q ss_pred cEEEecCCCCCchhHHHHHHHHH
Q 010075 327 NIYHVGSSLRNPVTLGLQVANTV 349 (519)
Q Consensus 327 ~iyni~s~~~~~i~~~~~~~~~~ 349 (519)
++||++++...++..+...+...
T Consensus 218 g~~~~~~~~~~s~~di~~~i~~~ 240 (292)
T TIGR01777 218 GPVNATAPEPVRNKEFAKALARA 240 (292)
T ss_pred CceEecCCCccCHHHHHHHHHHH
Confidence 58999998777776666665443
|
This model represents a clade of proteins of unknown function including the E. coli yfcH protein. |
| >COG1091 RfbD dTDP-4-dehydrorhamnose reductase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=99.89 E-value=2.1e-21 Score=189.45 Aligned_cols=207 Identities=22% Similarity=0.287 Sum_probs=157.1
Q ss_pred CEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEEec
Q 010075 13 KTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVPG 92 (519)
Q Consensus 13 k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v~g 92 (519)
|+|||||++|.+|..|.+.|. .+ ..|+.+.|+ ..
T Consensus 1 M~iLi~G~~GqLG~~L~~~l~-~~---~~v~a~~~~------------------------------------------~~ 34 (281)
T COG1091 1 MKILITGANGQLGTELRRALP-GE---FEVIATDRA------------------------------------------EL 34 (281)
T ss_pred CcEEEEcCCChHHHHHHHHhC-CC---ceEEeccCc------------------------------------------cc
Confidence 359999999999999999987 33 566776654 26
Q ss_pred cCCCCCCCCChhhhHHHHhc--CccEEEEcCccCCcc---ccHHHHHHHhHHHHHHHHHHHHhccCCceEEEEecceeec
Q 010075 93 DISSEDLGLKDSNLKEELWN--ELDIMVNSAAITKFD---ERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAYVAG 167 (519)
Q Consensus 93 Dl~~~~lgls~~~~~~~l~~--~vdiViH~Aa~v~f~---~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V~vSTa~v~~ 167 (519)
|+++ .+...+++. ++|+|||+||.+..+ ...+.++.+|..|+.++.++|++. + -.+||+||-||+.
T Consensus 35 Ditd-------~~~v~~~i~~~~PDvVIn~AAyt~vD~aE~~~e~A~~vNa~~~~~lA~aa~~~-g-a~lVhiSTDyVFD 105 (281)
T COG1091 35 DITD-------PDAVLEVIRETRPDVVINAAAYTAVDKAESEPELAFAVNATGAENLARAAAEV-G-ARLVHISTDYVFD 105 (281)
T ss_pred cccC-------hHHHHHHHHhhCCCEEEECccccccccccCCHHHHHHhHHHHHHHHHHHHHHh-C-CeEEEeecceEec
Confidence 8884 343445554 589999999998775 457899999999999999999986 3 3699999999986
Q ss_pred CcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcHHHHHHHHHHHHHHHhhc
Q 010075 168 ERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLMQQSKE 247 (519)
Q Consensus 168 ~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~Y~~sK~~aE~lv~~~~~ 247 (519)
...+ .+|.|+++. .|-|-||.||+++|..++++.
T Consensus 106 G~~~----~~Y~E~D~~-----------------------------------------~P~nvYG~sKl~GE~~v~~~~- 139 (281)
T COG1091 106 GEKG----GPYKETDTP-----------------------------------------NPLNVYGRSKLAGEEAVRAAG- 139 (281)
T ss_pred CCCC----CCCCCCCCC-----------------------------------------CChhhhhHHHHHHHHHHHHhC-
Confidence 5442 345443332 567899999999999999864
Q ss_pred CCcEEEEecCccccCCCCCCCcccccccccHHHHHHhhcCCceeeccCCCceeeeeeHHHHHHHHHHHHHHhccCCCCCc
Q 010075 248 NLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMIVAMVAHAKQPSDAN 327 (519)
Q Consensus 248 ~lp~~IvRPs~V~g~~~~p~~gw~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~d~vpVDdva~aii~a~~~~~~~~~~~~ 327 (519)
-...|+|.|.|||.... +.+..++.....|....+ -.++....+++.|+|+++..++..... ..
T Consensus 140 -~~~~I~Rtswv~g~~g~---------nFv~tml~la~~~~~l~v--v~Dq~gsPt~~~dlA~~i~~ll~~~~~----~~ 203 (281)
T COG1091 140 -PRHLILRTSWVYGEYGN---------NFVKTMLRLAKEGKELKV--VDDQYGSPTYTEDLADAILELLEKEKE----GG 203 (281)
T ss_pred -CCEEEEEeeeeecCCCC---------CHHHHHHHHhhcCCceEE--ECCeeeCCccHHHHHHHHHHHHhcccc----Cc
Confidence 45899999999998652 333345555555644433 346888899999999999998874332 34
Q ss_pred EEEecCCCC
Q 010075 328 IYHVGSSLR 336 (519)
Q Consensus 328 iyni~s~~~ 336 (519)
+||+++...
T Consensus 204 ~yH~~~~g~ 212 (281)
T COG1091 204 VYHLVNSGE 212 (281)
T ss_pred EEEEeCCCc
Confidence 999988755
|
|
| >PLN00016 RNA-binding protein; Provisional | Back alignment and domain information |
|---|
Probab=99.88 E-value=1.6e-21 Score=203.40 Aligned_cols=234 Identities=16% Similarity=0.186 Sum_probs=160.7
Q ss_pred CCEEEEe----CCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCce
Q 010075 12 NKTILVS----GVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKI 87 (519)
Q Consensus 12 ~k~VlIT----GaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v 87 (519)
.++|||| |||||||++|++.|++.| ++|++++|+...... +. ...|..+.+ +....+
T Consensus 52 ~~~VLVt~~~~GatG~iG~~lv~~L~~~G---~~V~~l~R~~~~~~~---~~-----~~~~~~~~~--------l~~~~v 112 (378)
T PLN00016 52 KKKVLIVNTNSGGHAFIGFYLAKELVKAG---HEVTLFTRGKEPSQK---MK-----KEPFSRFSE--------LSSAGV 112 (378)
T ss_pred cceEEEEeccCCCceeEhHHHHHHHHHCC---CEEEEEecCCcchhh---hc-----cCchhhhhH--------hhhcCc
Confidence 3689999 999999999999999988 688999998643210 00 000111110 001358
Q ss_pred EEEeccCCCCCCCCChhhhHHHHhcCccEEEEcCccCCccccHHHHHHHhHHHHHHHHHHHHhccCCceEEEEecceeec
Q 010075 88 TFVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKFDERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAYVAG 167 (519)
Q Consensus 88 ~~v~gDl~~~~lgls~~~~~~~l~~~vdiViH~Aa~v~f~~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V~vSTa~v~~ 167 (519)
+++.||+.+ .+.. ....++|+|||+++. +..++.+++++|++. ++++|||+||+++|+
T Consensus 113 ~~v~~D~~d-------~~~~-~~~~~~d~Vi~~~~~-------------~~~~~~~ll~aa~~~-gvkr~V~~SS~~vyg 170 (378)
T PLN00016 113 KTVWGDPAD-------VKSK-VAGAGFDVVYDNNGK-------------DLDEVEPVADWAKSP-GLKQFLFCSSAGVYK 170 (378)
T ss_pred eEEEecHHH-------HHhh-hccCCccEEEeCCCC-------------CHHHHHHHHHHHHHc-CCCEEEEEccHhhcC
Confidence 899999983 1111 112479999999763 245788999999986 899999999999998
Q ss_pred CcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcHHHHHHHHHHHHHHHhhc
Q 010075 168 ERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLMQQSKE 247 (519)
Q Consensus 168 ~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~Y~~sK~~aE~lv~~~~~ 247 (519)
...+ .++.|+.+ .+++. +|..+|.++++ .
T Consensus 171 ~~~~----~p~~E~~~--------------------------------------------~~p~~-sK~~~E~~l~~--~ 199 (378)
T PLN00016 171 KSDE----PPHVEGDA--------------------------------------------VKPKA-GHLEVEAYLQK--L 199 (378)
T ss_pred CCCC----CCCCCCCc--------------------------------------------CCCcc-hHHHHHHHHHH--c
Confidence 6431 11211111 11122 89999998876 5
Q ss_pred CCcEEEEecCccccCCCCCCCcccccccccHHHHHHhhcCCceeeccCCCceeeeeeHHHHHHHHHHHHHHhccCCCCCc
Q 010075 248 NLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMIVAMVAHAKQPSDAN 327 (519)
Q Consensus 248 ~lp~~IvRPs~V~g~~~~p~~gw~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~d~vpVDdva~aii~a~~~~~~~~~~~~ 327 (519)
+++++++||+.+||+.... .....++..+..|....+++++...++++|++|+|++++.++..... .++
T Consensus 200 ~l~~~ilRp~~vyG~~~~~--------~~~~~~~~~~~~~~~i~~~g~g~~~~~~i~v~Dva~ai~~~l~~~~~---~~~ 268 (378)
T PLN00016 200 GVNWTSFRPQYIYGPGNNK--------DCEEWFFDRLVRGRPVPIPGSGIQLTQLGHVKDLASMFALVVGNPKA---AGQ 268 (378)
T ss_pred CCCeEEEeceeEECCCCCC--------chHHHHHHHHHcCCceeecCCCCeeeceecHHHHHHHHHHHhcCccc---cCC
Confidence 8999999999999986521 11122344555666666778889999999999999999999864321 257
Q ss_pred EEEecCCCCCchhHHHHHHHH
Q 010075 328 IYHVGSSLRNPVTLGLQVANT 348 (519)
Q Consensus 328 iyni~s~~~~~i~~~~~~~~~ 348 (519)
+||++++...++..++..+..
T Consensus 269 ~yni~~~~~~s~~el~~~i~~ 289 (378)
T PLN00016 269 IFNIVSDRAVTFDGMAKACAK 289 (378)
T ss_pred EEEecCCCccCHHHHHHHHHH
Confidence 999999866665555554433
|
|
| >PRK05865 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=99.84 E-value=1.6e-19 Score=201.33 Aligned_cols=198 Identities=14% Similarity=0.162 Sum_probs=145.4
Q ss_pred CEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEEec
Q 010075 13 KTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVPG 92 (519)
Q Consensus 13 k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v~g 92 (519)
|+|+|||||||||+++++.|++.| .+|+++.|+.... + ..++.++.+
T Consensus 1 MkILVTGATGfIGs~La~~Ll~~G---~~Vv~l~R~~~~~-----~-------------------------~~~v~~v~g 47 (854)
T PRK05865 1 MRIAVTGASGVLGRGLTARLLSQG---HEVVGIARHRPDS-----W-------------------------PSSADFIAA 47 (854)
T ss_pred CEEEEECCCCHHHHHHHHHHHHCc---CEEEEEECCchhh-----c-------------------------ccCceEEEe
Confidence 579999999999999999999988 5788888863210 0 135788999
Q ss_pred cCCCCCCCCChhhhHHHHhcCccEEEEcCccCCccccHHHHHHHhHHHHHHHHHHHHhccCCceEEEEecceeecCcCCe
Q 010075 93 DISSEDLGLKDSNLKEELWNELDIMVNSAAITKFDERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAYVAGERTGL 172 (519)
Q Consensus 93 Dl~~~~lgls~~~~~~~l~~~vdiViH~Aa~v~f~~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V~vSTa~v~~~~~~~ 172 (519)
|+++ .+....+++++|+|||+|+.... ..++|+.|+.+++++|++. ++++|||+||..
T Consensus 48 DL~D-------~~~l~~al~~vD~VVHlAa~~~~------~~~vNv~GT~nLLeAa~~~-gvkr~V~iSS~~-------- 105 (854)
T PRK05865 48 DIRD-------ATAVESAMTGADVVAHCAWVRGR------NDHINIDGTANVLKAMAET-GTGRIVFTSSGH-------- 105 (854)
T ss_pred eCCC-------HHHHHHHHhCCCEEEECCCcccc------hHHHHHHHHHHHHHHHHHc-CCCeEEEECCcH--------
Confidence 9994 33345677889999999986432 4689999999999999986 788999999741
Q ss_pred eecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcHHHHHHHHHHHHHHHhhcCCcEE
Q 010075 173 ILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLMQQSKENLSLV 252 (519)
Q Consensus 173 i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~Y~~sK~~aE~lv~~~~~~lp~~ 252 (519)
|..+|+++.+ .+++++
T Consensus 106 --------------------------------------------------------------K~aaE~ll~~--~gl~~v 121 (854)
T PRK05865 106 --------------------------------------------------------------QPRVEQMLAD--CGLEWV 121 (854)
T ss_pred --------------------------------------------------------------HHHHHHHHHH--cCCCEE
Confidence 5667887765 589999
Q ss_pred EEecCccccCCCCCCCcccccccccHHHHHHhhcCCceeeccCCCceeeeeeHHHHHHHHHHHHHHhccCCCCCcEEEec
Q 010075 253 IIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMIVAMVAHAKQPSDANIYHVG 332 (519)
Q Consensus 253 IvRPs~V~g~~~~p~~gw~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~d~vpVDdva~aii~a~~~~~~~~~~~~iyni~ 332 (519)
|+||++|||+.. +.| +.... .......+++...+|+|||+|+|++++.++..... .+++||++
T Consensus 122 ILRp~~VYGP~~---~~~----------i~~ll-~~~v~~~G~~~~~~dfIhVdDVA~Ai~~aL~~~~~---~ggvyNIg 184 (854)
T PRK05865 122 AVRCALIFGRNV---DNW----------VQRLF-ALPVLPAGYADRVVQVVHSDDAQRLLVRALLDTVI---DSGPVNLA 184 (854)
T ss_pred EEEeceEeCCCh---HHH----------HHHHh-cCceeccCCCCceEeeeeHHHHHHHHHHHHhCCCc---CCCeEEEE
Confidence 999999999852 112 11111 11112234556678999999999999988753211 24689999
Q ss_pred CCCCCchhHHHHHH
Q 010075 333 SSLRNPVTLGLQVA 346 (519)
Q Consensus 333 s~~~~~i~~~~~~~ 346 (519)
++...++..+...+
T Consensus 185 sg~~~Si~EIae~l 198 (854)
T PRK05865 185 APGELTFRRIAAAL 198 (854)
T ss_pred CCCcccHHHHHHHH
Confidence 98776655444443
|
|
| >COG1090 Predicted nucleoside-diphosphate sugar epimerase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.82 E-value=8.8e-19 Score=167.31 Aligned_cols=220 Identities=17% Similarity=0.208 Sum_probs=146.2
Q ss_pred EEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEEeccC
Q 010075 15 ILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVPGDI 94 (519)
Q Consensus 15 VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v~gDl 94 (519)
|+|||||||||++|+..|.+.| ++|++|+|+....+.. + ...+. .+
T Consensus 1 IliTGgTGlIG~~L~~~L~~~g---h~v~iltR~~~~~~~~--~-------------------------~~~v~----~~ 46 (297)
T COG1090 1 ILITGGTGLIGRALTARLRKGG---HQVTILTRRPPKASQN--L-------------------------HPNVT----LW 46 (297)
T ss_pred CeEeccccchhHHHHHHHHhCC---CeEEEEEcCCcchhhh--c-------------------------Ccccc----cc
Confidence 6899999999999999999988 7889999987654211 0 01111 11
Q ss_pred CCCCCCCChhhhHHHHhc-CccEEEEcCccCCcc----cc-HHHHHHHhHHHHHHHHHHHHhc-cCCceEEEEecceeec
Q 010075 95 SSEDLGLKDSNLKEELWN-ELDIMVNSAAITKFD----ER-YDVAFGINTLGVIHLVNFAKKC-VKLKVFVHVSTAYVAG 167 (519)
Q Consensus 95 ~~~~lgls~~~~~~~l~~-~vdiViH~Aa~v~f~----~~-~~~~~~~Nv~gt~~ll~~a~~~-~~l~~~V~vSTa~v~~ 167 (519)
. .. ....+ ++|+|||+||..-+. +. -+..++.-+..|+.|.++..++ .+++.||.-|....||
T Consensus 47 ~---------~~-~~~~~~~~DavINLAG~~I~~rrWt~~~K~~i~~SRi~~T~~L~e~I~~~~~~P~~~isaSAvGyYG 116 (297)
T COG1090 47 E---------GL-ADALTLGIDAVINLAGEPIAERRWTEKQKEEIRQSRINTTEKLVELIAASETKPKVLISASAVGYYG 116 (297)
T ss_pred c---------hh-hhcccCCCCEEEECCCCccccccCCHHHHHHHHHHHhHHHHHHHHHHHhccCCCcEEEecceEEEec
Confidence 1 11 12223 799999999986443 33 3445778899999999998754 3677889899999999
Q ss_pred CcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcHHHHHHHHHHHHHHHh-h
Q 010075 168 ERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLMQQS-K 246 (519)
Q Consensus 168 ~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~Y~~sK~~aE~lv~~~-~ 246 (519)
+.. |++++|+.+..-+-..++|. -| |....+. .
T Consensus 117 ~~~----~~~~tE~~~~g~~Fla~lc~----------------------------------------~W--E~~a~~a~~ 150 (297)
T COG1090 117 HSG----DRVVTEESPPGDDFLAQLCQ----------------------------------------DW--EEEALQAQQ 150 (297)
T ss_pred CCC----ceeeecCCCCCCChHHHHHH----------------------------------------HH--HHHHhhhhh
Confidence 764 45555544433222222221 11 3334433 4
Q ss_pred cCCcEEEEecCccccCCCCCCCcccccccccHHHHHHhhcCCceeeccCCCceeeeeeHHHHHHHHHHHHHHhccCCCCC
Q 010075 247 ENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMIVAMVAHAKQPSDA 326 (519)
Q Consensus 247 ~~lp~~IvRPs~V~g~~~~p~~gw~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~d~vpVDdva~aii~a~~~~~~~~~~~ 326 (519)
.+.+++++|.|+|.|+....++... .. ...+.| .-.|+|++.+.|||+||++++|..++.+..- .
T Consensus 151 ~gtRvvllRtGvVLs~~GGaL~~m~-------~~-fk~glG---G~~GsGrQ~~SWIhieD~v~~I~fll~~~~l----s 215 (297)
T COG1090 151 LGTRVVLLRTGVVLSPDGGALGKML-------PL-FKLGLG---GKLGSGRQWFSWIHIEDLVNAILFLLENEQL----S 215 (297)
T ss_pred cCceEEEEEEEEEecCCCcchhhhc-------ch-hhhccC---CccCCCCceeeeeeHHHHHHHHHHHHhCcCC----C
Confidence 5889999999999997652221111 01 112222 2259999999999999999999999985432 2
Q ss_pred cEEEecCCCCCchhH
Q 010075 327 NIYHVGSSLRNPVTL 341 (519)
Q Consensus 327 ~iyni~s~~~~~i~~ 341 (519)
..||++++ +|++.
T Consensus 216 Gp~N~taP--~PV~~ 228 (297)
T COG1090 216 GPFNLTAP--NPVRN 228 (297)
T ss_pred CcccccCC--CcCcH
Confidence 47999998 66655
|
|
| >PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B | Back alignment and domain information |
|---|
Probab=99.82 E-value=9.5e-19 Score=163.36 Aligned_cols=182 Identities=21% Similarity=0.300 Sum_probs=140.2
Q ss_pred EEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEEeccC
Q 010075 15 ILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVPGDI 94 (519)
Q Consensus 15 VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v~gDl 94 (519)
|+|+||||++|+.+++.|++++ ++|++++|++.+... ..+++++.+|+
T Consensus 1 I~V~GatG~vG~~l~~~L~~~~---~~V~~~~R~~~~~~~-----------------------------~~~~~~~~~d~ 48 (183)
T PF13460_consen 1 ILVFGATGFVGRALAKQLLRRG---HEVTALVRSPSKAED-----------------------------SPGVEIIQGDL 48 (183)
T ss_dssp EEEETTTSHHHHHHHHHHHHTT---SEEEEEESSGGGHHH-----------------------------CTTEEEEESCT
T ss_pred eEEECCCChHHHHHHHHHHHCC---CEEEEEecCchhccc-----------------------------ccccccceeee
Confidence 7999999999999999999998 799999998653210 26899999999
Q ss_pred CCCCCCCChhhhHHHHhcCccEEEEcCccCCccccHHHHHHHhHHHHHHHHHHHHhccCCceEEEEecceeecCcCCeee
Q 010075 95 SSEDLGLKDSNLKEELWNELDIMVNSAAITKFDERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAYVAGERTGLIL 174 (519)
Q Consensus 95 ~~~~lgls~~~~~~~l~~~vdiViH~Aa~v~f~~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V~vSTa~v~~~~~~~i~ 174 (519)
.+ .+.....+.++|+|||+++.... ....+++++++|++. +++++|++||+.++....+...
T Consensus 49 ~d-------~~~~~~al~~~d~vi~~~~~~~~----------~~~~~~~~~~a~~~~-~~~~~v~~s~~~~~~~~~~~~~ 110 (183)
T PF13460_consen 49 FD-------PDSVKAALKGADAVIHAAGPPPK----------DVDAAKNIIEAAKKA-GVKRVVYLSSAGVYRDPPGLFS 110 (183)
T ss_dssp TC-------HHHHHHHHTTSSEEEECCHSTTT----------HHHHHHHHHHHHHHT-TSSEEEEEEETTGTTTCTSEEE
T ss_pred hh-------hhhhhhhhhhcchhhhhhhhhcc----------ccccccccccccccc-ccccceeeeccccCCCCCcccc
Confidence 94 44445777899999999976443 177889999999997 8999999999999886543211
Q ss_pred cccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcHHHHHHHHHHHHHHHhhcCCcEEEE
Q 010075 175 ENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLMQQSKENLSLVII 254 (519)
Q Consensus 175 E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~Y~~sK~~aE~lv~~~~~~lp~~Iv 254 (519)
... .+....|...|..+|+++++ .+++++++
T Consensus 111 ~~~-----------------------------------------------~~~~~~~~~~~~~~e~~~~~--~~~~~~iv 141 (183)
T PF13460_consen 111 DED-----------------------------------------------KPIFPEYARDKREAEEALRE--SGLNWTIV 141 (183)
T ss_dssp GGT-----------------------------------------------CGGGHHHHHHHHHHHHHHHH--STSEEEEE
T ss_pred ccc-----------------------------------------------ccchhhhHHHHHHHHHHHHh--cCCCEEEE
Confidence 100 01235788999999999976 58999999
Q ss_pred ecCccccCCCCCCCcccccccccHHHHHHhhcCCceeeccCCCceeeeeeHHHHHHHHHHHHH
Q 010075 255 RPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMIVAMV 317 (519)
Q Consensus 255 RPs~V~g~~~~p~~gw~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~d~vpVDdva~aii~a~~ 317 (519)
||+.++|...... . .+...+.....+|+++|+|.+++.++.
T Consensus 142 rp~~~~~~~~~~~-~---------------------~~~~~~~~~~~~i~~~DvA~~~~~~l~ 182 (183)
T PF13460_consen 142 RPGWIYGNPSRSY-R---------------------LIKEGGPQGVNFISREDVAKAIVEALE 182 (183)
T ss_dssp EESEEEBTTSSSE-E---------------------EESSTSTTSHCEEEHHHHHHHHHHHHH
T ss_pred ECcEeEeCCCcce-e---------------------EEeccCCCCcCcCCHHHHHHHHHHHhC
Confidence 9999999864310 0 111133455689999999999999875
|
... |
| >PRK12320 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=99.81 E-value=7.2e-19 Score=192.44 Aligned_cols=202 Identities=18% Similarity=0.265 Sum_probs=140.7
Q ss_pred CEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEEec
Q 010075 13 KTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVPG 92 (519)
Q Consensus 13 k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v~g 92 (519)
|+|||||||||||++|+++|++.| ++|+++.|..... ....++++.+
T Consensus 1 MkILVTGAaGFIGs~La~~Ll~~G---~~Vi~ldr~~~~~------------------------------~~~~ve~v~~ 47 (699)
T PRK12320 1 MQILVTDATGAVGRSVTRQLIAAG---HTVSGIAQHPHDA------------------------------LDPRVDYVCA 47 (699)
T ss_pred CEEEEECCCCHHHHHHHHHHHhCC---CEEEEEeCChhhc------------------------------ccCCceEEEc
Confidence 479999999999999999999988 6788888753210 0145789999
Q ss_pred cCCCCCCCCChhhhHHHHhcCccEEEEcCccCCccccHHHHHHHhHHHHHHHHHHHHhccCCceEEEEecceeecCcCCe
Q 010075 93 DISSEDLGLKDSNLKEELWNELDIMVNSAAITKFDERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAYVAGERTGL 172 (519)
Q Consensus 93 Dl~~~~lgls~~~~~~~l~~~vdiViH~Aa~v~f~~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V~vSTa~v~~~~~~~ 172 (519)
|+++ ... ..++.++|+|||+|+.... . ...+|+.|+.+++++|++. +. ++||+||++ |...
T Consensus 48 Dl~d-------~~l-~~al~~~D~VIHLAa~~~~-~----~~~vNv~Gt~nLleAA~~~-Gv-RiV~~SS~~--G~~~-- 108 (699)
T PRK12320 48 SLRN-------PVL-QELAGEADAVIHLAPVDTS-A----PGGVGITGLAHVANAAARA-GA-RLLFVSQAA--GRPE-- 108 (699)
T ss_pred cCCC-------HHH-HHHhcCCCEEEEcCccCcc-c----hhhHHHHHHHHHHHHHHHc-CC-eEEEEECCC--CCCc--
Confidence 9995 333 3666789999999986421 1 2358999999999999986 55 699999874 3210
Q ss_pred eecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcHHHHHHHHHHHHHHHhhcCCcEE
Q 010075 173 ILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLMQQSKENLSLV 252 (519)
Q Consensus 173 i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~Y~~sK~~aE~lv~~~~~~lp~~ 252 (519)
.|. .+|.++.. ..++++
T Consensus 109 ---------------------------------------------------------~~~----~aE~ll~~--~~~p~~ 125 (699)
T PRK12320 109 ---------------------------------------------------------LYR----QAETLVST--GWAPSL 125 (699)
T ss_pred ---------------------------------------------------------ccc----HHHHHHHh--cCCCEE
Confidence 011 35666655 458999
Q ss_pred EEecCccccCCCCCCCcccccccccHHHHHHhhcCCceeeccCCCceeeeeeHHHHHHHHHHHHHHhccCCCCCcEEEec
Q 010075 253 IIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMIVAMVAHAKQPSDANIYHVG 332 (519)
Q Consensus 253 IvRPs~V~g~~~~p~~gw~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~d~vpVDdva~aii~a~~~~~~~~~~~~iyni~ 332 (519)
|+|+++|||+...+. . .+.+..++.....+ ....+|||||++++++.++... . ..+||++
T Consensus 126 ILR~~nVYGp~~~~~----~-~r~I~~~l~~~~~~----------~pI~vIyVdDvv~alv~al~~~---~--~GiyNIG 185 (699)
T PRK12320 126 VIRIAPPVGRQLDWM----V-CRTVATLLRSKVSA----------RPIRVLHLDDLVRFLVLALNTD---R--NGVVDLA 185 (699)
T ss_pred EEeCceecCCCCccc----H-hHHHHHHHHHHHcC----------CceEEEEHHHHHHHHHHHHhCC---C--CCEEEEe
Confidence 999999999854211 0 01122222222111 2344699999999999988631 1 2499999
Q ss_pred CCCCCchhHHHHHHHHH
Q 010075 333 SSLRNPVTLGLQVANTV 349 (519)
Q Consensus 333 s~~~~~i~~~~~~~~~~ 349 (519)
++...++..++..+...
T Consensus 186 ~~~~~Si~el~~~i~~~ 202 (699)
T PRK12320 186 TPDTTNVVTAWRLLRSV 202 (699)
T ss_pred CCCeeEHHHHHHHHHHh
Confidence 99888877766655443
|
|
| >PRK06482 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.79 E-value=7.4e-18 Score=167.87 Aligned_cols=221 Identities=17% Similarity=0.165 Sum_probs=143.0
Q ss_pred CCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEEe
Q 010075 12 NKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVP 91 (519)
Q Consensus 12 ~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v~ 91 (519)
.|+|||||||||||++++++|++.| .+|+++.|+... .+.+. ++. ..++.++.
T Consensus 2 ~k~vlVtGasg~IG~~la~~L~~~g---~~v~~~~r~~~~---~~~~~-------------~~~--------~~~~~~~~ 54 (276)
T PRK06482 2 SKTWFITGASSGFGRGMTERLLARG---DRVAATVRRPDA---LDDLK-------------ARY--------GDRLWVLQ 54 (276)
T ss_pred CCEEEEecCCCHHHHHHHHHHHHCC---CEEEEEeCCHHH---HHHHH-------------Hhc--------cCceEEEE
Confidence 3789999999999999999999988 578898886421 11111 111 24688999
Q ss_pred ccCCCCCCCCChhhhHHHH-------hcCccEEEEcCccCCc-------cccHHHHHHHhHHHHHHHHHHHHh---ccCC
Q 010075 92 GDISSEDLGLKDSNLKEEL-------WNELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKK---CVKL 154 (519)
Q Consensus 92 gDl~~~~lgls~~~~~~~l-------~~~vdiViH~Aa~v~f-------~~~~~~~~~~Nv~gt~~ll~~a~~---~~~l 154 (519)
+|+++++ ....+ ..++|+|||+||.... .+.++..+++|+.|+.++++.+.+ ..+.
T Consensus 55 ~D~~~~~-------~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~ 127 (276)
T PRK06482 55 LDVTDSA-------AVRAVVDRAFAALGRIDVVVSNAGYGLFGAAEELSDAQIRRQIDTNLIGSIQVIRAALPHLRRQGG 127 (276)
T ss_pred ccCCCHH-------HHHHHHHHHHHHcCCCCEEEECCCCCCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCC
Confidence 9999642 22222 2468999999997643 234667789999999999999732 1356
Q ss_pred ceEEEEecceeecCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcHHHHH
Q 010075 155 KVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFT 234 (519)
Q Consensus 155 ~~~V~vSTa~v~~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~Y~~s 234 (519)
++||++||...... . +..+.|+.|
T Consensus 128 ~~iv~~sS~~~~~~---------~-----------------------------------------------~~~~~Y~~s 151 (276)
T PRK06482 128 GRIVQVSSEGGQIA---------Y-----------------------------------------------PGFSLYHAT 151 (276)
T ss_pred CEEEEEcCcccccC---------C-----------------------------------------------CCCchhHHH
Confidence 79999999643211 0 224679999
Q ss_pred HHHHHHHHHHh-----hcCCcEEEEecCccccCCCCCC--Cccccccc-ccHH-HHHHhhcCCceeeccCCCceeeeeeH
Q 010075 235 KTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPF--PGWVEDLK-TINT-LFVASAQGNLRCLVGETKVIMDVIPV 305 (519)
Q Consensus 235 K~~aE~lv~~~-----~~~lp~~IvRPs~V~g~~~~p~--~gw~~~~~-~~~~-~i~~~~~g~~~~~~~~~~~~~d~vpV 305 (519)
|+..|.+++.+ ..+++++++||+.+..+..... ........ .+.. +......|.. . -+.++
T Consensus 152 K~a~~~~~~~l~~~~~~~gi~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~-~~~d~ 221 (276)
T PRK06482 152 KWGIEGFVEAVAQEVAPFGIEFTIVEPGPARTNFGAGLDRGAPLDAYDDTPVGDLRRALADGSF---------A-IPGDP 221 (276)
T ss_pred HHHHHHHHHHHHHHhhccCcEEEEEeCCccccCCcccccccCCCccccchhhHHHHHHHhhccC---------C-CCCCH
Confidence 99999988765 2489999999998833321100 11111100 1111 1112221111 1 13568
Q ss_pred HHHHHHHHHHHHHhccCCCCCcEEEecCCCC
Q 010075 306 DMVVNAMIVAMVAHAKQPSDANIYHVGSSLR 336 (519)
Q Consensus 306 Ddva~aii~a~~~~~~~~~~~~iyni~s~~~ 336 (519)
+|++++++.++.... .+..||++++..
T Consensus 222 ~~~~~a~~~~~~~~~----~~~~~~~g~~~~ 248 (276)
T PRK06482 222 QKMVQAMIASADQTP----APRRLTLGSDAY 248 (276)
T ss_pred HHHHHHHHHHHcCCC----CCeEEecChHHH
Confidence 999999999985321 245799998844
|
|
| >PRK13394 3-hydroxybutyrate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.79 E-value=3.4e-18 Score=168.55 Aligned_cols=228 Identities=16% Similarity=0.123 Sum_probs=149.4
Q ss_pred cCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 010075 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (519)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (519)
+++|++|||||||+||+++++.|++.| .+|+++.|+.... +++.++ +++ . ..++.+
T Consensus 5 ~~~~~vlItGasg~iG~~la~~l~~~G---~~v~~~~r~~~~~---~~~~~~---------~~~-~--------~~~~~~ 60 (262)
T PRK13394 5 LNGKTAVVTGAASGIGKEIALELARAG---AAVAIADLNQDGA---NAVADE---------INK-A--------GGKAIG 60 (262)
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHCC---CeEEEEeCChHHH---HHHHHH---------HHh-c--------CceEEE
Confidence 468999999999999999999999998 5678888875321 222111 111 0 245788
Q ss_pred EeccCCCCCCCCChhhhHHHHh-------cCccEEEEcCccCCc-------cccHHHHHHHhHHH----HHHHHHHH-Hh
Q 010075 90 VPGDISSEDLGLKDSNLKEELW-------NELDIMVNSAAITKF-------DERYDVAFGINTLG----VIHLVNFA-KK 150 (519)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~-------~~vdiViH~Aa~v~f-------~~~~~~~~~~Nv~g----t~~ll~~a-~~ 150 (519)
+.+|++++ +..+.++ .++|+|||+|+.... .+.++..+++|+.| +.++++.+ +.
T Consensus 61 ~~~Dl~~~-------~~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~ 133 (262)
T PRK13394 61 VAMDVTNE-------DAVNAGIDKVAERFGSVDILVSNAGIQIVNPIENYSFADWKKMQAIHVDGAFLTTKAALKHMYKD 133 (262)
T ss_pred EECCCCCH-------HHHHHHHHHHHHHcCCCCEEEECCccCCCCchhhCCHHHHHHHHHhhhhhHHHHHHHHHHHHHhh
Confidence 99999963 2222222 358999999997543 23466778899999 66677777 44
Q ss_pred ccCCceEEEEecceeecCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcH
Q 010075 151 CVKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNT 230 (519)
Q Consensus 151 ~~~l~~~V~vSTa~v~~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~ 230 (519)
.+.+++|++||.+..... +..+.
T Consensus 134 -~~~~~iv~~ss~~~~~~~--------------------------------------------------------~~~~~ 156 (262)
T PRK13394 134 -DRGGVVIYMGSVHSHEAS--------------------------------------------------------PLKSA 156 (262)
T ss_pred -cCCcEEEEEcchhhcCCC--------------------------------------------------------CCCcc
Confidence 367899999996433210 12356
Q ss_pred HHHHHHHHHHHHHHh-----hcCCcEEEEecCccccCCCC-CCCccccccc-ccHHHHHHhhcCCceeeccCCCceeeee
Q 010075 231 YVFTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKE-PFPGWVEDLK-TINTLFVASAQGNLRCLVGETKVIMDVI 303 (519)
Q Consensus 231 Y~~sK~~aE~lv~~~-----~~~lp~~IvRPs~V~g~~~~-p~~gw~~~~~-~~~~~i~~~~~g~~~~~~~~~~~~~d~v 303 (519)
|+.+|+..+.+++.+ ..+++++++||+.++++... ..+....... .....+. .+...+....+++
T Consensus 157 y~~sk~a~~~~~~~la~~~~~~~i~v~~v~pg~v~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~ 228 (262)
T PRK13394 157 YVTAKHGLLGLARVLAKEGAKHNVRSHVVCPGFVRTPLVDKQIPEQAKELGISEEEVVK--------KVMLGKTVDGVFT 228 (262)
T ss_pred cHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcccchhhhhhhHhhhhccCCChHHHHH--------HHHhcCCCCCCCC
Confidence 999999988887755 35799999999999987531 1111100000 0001111 1223344567899
Q ss_pred eHHHHHHHHHHHHHHhccCCCCCcEEEecCC
Q 010075 304 PVDMVVNAMIVAMVAHAKQPSDANIYHVGSS 334 (519)
Q Consensus 304 pVDdva~aii~a~~~~~~~~~~~~iyni~s~ 334 (519)
+++|++++++.++..... ...+.+|++++|
T Consensus 229 ~~~dva~a~~~l~~~~~~-~~~g~~~~~~~g 258 (262)
T PRK13394 229 TVEDVAQTVLFLSSFPSA-ALTGQSFVVSHG 258 (262)
T ss_pred CHHHHHHHHHHHcCcccc-CCcCCEEeeCCc
Confidence 999999999998864322 223678999876
|
|
| >PLN02260 probable rhamnose biosynthetic enzyme | Back alignment and domain information |
|---|
Probab=99.79 E-value=7.3e-18 Score=188.43 Aligned_cols=216 Identities=12% Similarity=0.060 Sum_probs=138.1
Q ss_pred CCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEE
Q 010075 11 ENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFV 90 (519)
Q Consensus 11 ~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v 90 (519)
+.|+|||||||||||++|++.|++.+.+| . +.
T Consensus 379 ~~mkiLVtGa~G~iG~~l~~~L~~~g~~v---~---------------------------------------------~~ 410 (668)
T PLN02260 379 PSLKFLIYGRTGWIGGLLGKLCEKQGIAY---E---------------------------------------------YG 410 (668)
T ss_pred CCceEEEECCCchHHHHHHHHHHhCCCeE---E---------------------------------------------ee
Confidence 45799999999999999999999877432 1 11
Q ss_pred eccCCCCCCCCChhhhHHHHhc--CccEEEEcCccCC---c---cccHHHHHHHhHHHHHHHHHHHHhccCCceEEEEec
Q 010075 91 PGDISSEDLGLKDSNLKEELWN--ELDIMVNSAAITK---F---DERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVST 162 (519)
Q Consensus 91 ~gDl~~~~lgls~~~~~~~l~~--~vdiViH~Aa~v~---f---~~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V~vST 162 (519)
.+|+++ .+.+...+. ++|+||||||.+. . ..+...++++|+.||.+|+++|++. +++ ++|+||
T Consensus 411 ~~~l~d-------~~~v~~~i~~~~pd~Vih~Aa~~~~~~~~~~~~~~~~~~~~N~~gt~~l~~a~~~~-g~~-~v~~Ss 481 (668)
T PLN02260 411 KGRLED-------RSSLLADIRNVKPTHVFNAAGVTGRPNVDWCESHKVETIRANVVGTLTLADVCREN-GLL-MMNFAT 481 (668)
T ss_pred cccccc-------HHHHHHHHHhhCCCEEEECCcccCCCCCChHHhCHHHHHHHHhHHHHHHHHHHHHc-CCe-EEEEcc
Confidence 234553 222223333 6999999999863 2 2366788999999999999999997 665 788899
Q ss_pred ceeecCcCCee--ecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcHHHHHHHHHHH
Q 010075 163 AYVAGERTGLI--LENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEM 240 (519)
Q Consensus 163 a~v~~~~~~~i--~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~Y~~sK~~aE~ 240 (519)
.+|++...... ...++.|+.+. ..+.+.|+.||.++|+
T Consensus 482 ~~v~~~~~~~~~~~~~p~~E~~~~----------------------------------------~~~~~~Yg~sK~~~E~ 521 (668)
T PLN02260 482 GCIFEYDAKHPEGSGIGFKEEDKP----------------------------------------NFTGSFYSKTKAMVEE 521 (668)
T ss_pred cceecCCcccccccCCCCCcCCCC----------------------------------------CCCCChhhHHHHHHHH
Confidence 99886421000 01233322211 1234899999999999
Q ss_pred HHHHhhcCCcEEEEecCccccCCCCCCCcccccccccHHHHHHhhcCCceeeccCCCceeeeeeHHHHHHHHHHHHHHhc
Q 010075 241 LMQQSKENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMIVAMVAHA 320 (519)
Q Consensus 241 lv~~~~~~lp~~IvRPs~V~g~~~~p~~gw~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~d~vpVDdva~aii~a~~~~~ 320 (519)
++..+. ...++|++.+||..... ...++..+.++.. .+.. + .+...+|+++.+++.++..
T Consensus 522 ~~~~~~---~~~~~r~~~~~~~~~~~----------~~nfv~~~~~~~~-~~~v-p---~~~~~~~~~~~~~~~l~~~-- 581 (668)
T PLN02260 522 LLREYD---NVCTLRVRMPISSDLSN----------PRNFITKISRYNK-VVNI-P---NSMTVLDELLPISIEMAKR-- 581 (668)
T ss_pred HHHhhh---hheEEEEEEecccCCCC----------ccHHHHHHhccce-eecc-C---CCceehhhHHHHHHHHHHh--
Confidence 998862 47788888888743210 1123333332222 1111 1 2457788999888877752
Q ss_pred cCCCCCcEEEecCCCCCchhHHHHHH
Q 010075 321 KQPSDANIYHVGSSLRNPVTLGLQVA 346 (519)
Q Consensus 321 ~~~~~~~iyni~s~~~~~i~~~~~~~ 346 (519)
. .+++||++++...+...+...+
T Consensus 582 ~---~~giyni~~~~~~s~~e~a~~i 604 (668)
T PLN02260 582 N---LRGIWNFTNPGVVSHNEILEMY 604 (668)
T ss_pred C---CCceEEecCCCcCcHHHHHHHH
Confidence 1 1469999998654433344433
|
|
| >PLN00141 Tic62-NAD(P)-related group II protein; Provisional | Back alignment and domain information |
|---|
Probab=99.78 E-value=5e-18 Score=166.95 Aligned_cols=224 Identities=20% Similarity=0.298 Sum_probs=148.6
Q ss_pred hhcCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCce
Q 010075 8 EFLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKI 87 (519)
Q Consensus 8 ~~~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v 87 (519)
+.-++|+|+||||||++|+.+++.|++.| ++|++++|+.... +.+. + ...++
T Consensus 13 ~~~~~~~ilItGasG~iG~~l~~~L~~~g---~~V~~~~R~~~~~---~~~~----------------~------~~~~~ 64 (251)
T PLN00141 13 ENVKTKTVFVAGATGRTGKRIVEQLLAKG---FAVKAGVRDVDKA---KTSL----------------P------QDPSL 64 (251)
T ss_pred ccccCCeEEEECCCcHHHHHHHHHHHhCC---CEEEEEecCHHHH---HHhc----------------c------cCCce
Confidence 44567999999999999999999999987 6789999875321 0000 0 01368
Q ss_pred EEEeccCCCCCCCCChhhhHHHHh-cCccEEEEcCccCCccccHHHHHHHhHHHHHHHHHHHHhccCCceEEEEecceee
Q 010075 88 TFVPGDISSEDLGLKDSNLKEELW-NELDIMVNSAAITKFDERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAYVA 166 (519)
Q Consensus 88 ~~v~gDl~~~~lgls~~~~~~~l~-~~vdiViH~Aa~v~f~~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V~vSTa~v~ 166 (519)
+++.+|++++ ..+.. ..+ .++|+|||+++......+ ...+++|+.|+.++++++++. ++++||++||..+|
T Consensus 65 ~~~~~Dl~d~-----~~~l~-~~~~~~~d~vi~~~g~~~~~~~-~~~~~~n~~~~~~ll~a~~~~-~~~~iV~iSS~~v~ 136 (251)
T PLN00141 65 QIVRADVTEG-----SDKLV-EAIGDDSDAVICATGFRRSFDP-FAPWKVDNFGTVNLVEACRKA-GVTRFILVSSILVN 136 (251)
T ss_pred EEEEeeCCCC-----HHHHH-HHhhcCCCEEEECCCCCcCCCC-CCceeeehHHHHHHHHHHHHc-CCCEEEEEcccccc
Confidence 8999999952 12333 444 589999999886422122 223578999999999999885 78999999999998
Q ss_pred cCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcHHHHHHHHHHHHHHHhh
Q 010075 167 GERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLMQQSK 246 (519)
Q Consensus 167 ~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~Y~~sK~~aE~lv~~~~ 246 (519)
+...+......|. . . .....|..+|..+|+++++
T Consensus 137 g~~~~~~~~~~~~------~---~-----------------------------------~~~~~~~~~k~~~e~~l~~-- 170 (251)
T PLN00141 137 GAAMGQILNPAYI------F---L-----------------------------------NLFGLTLVAKLQAEKYIRK-- 170 (251)
T ss_pred CCCcccccCcchh------H---H-----------------------------------HHHHHHHHHHHHHHHHHHh--
Confidence 7532110000000 0 0 1112355679999988776
Q ss_pred cCCcEEEEecCccccCCCCCCCcccccccccHHHHHHhhcCCceeeccCCCceeeeeeHHHHHHHHHHHHHHhccCCCCC
Q 010075 247 ENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMIVAMVAHAKQPSDA 326 (519)
Q Consensus 247 ~~lp~~IvRPs~V~g~~~~p~~gw~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~d~vpVDdva~aii~a~~~~~~~~~~~ 326 (519)
.+++++++||+.+++.... |... +.........+|+.+|+|+++..++..... ..
T Consensus 171 ~gi~~~iirpg~~~~~~~~---------------------~~~~-~~~~~~~~~~~i~~~dvA~~~~~~~~~~~~---~~ 225 (251)
T PLN00141 171 SGINYTIVRPGGLTNDPPT---------------------GNIV-MEPEDTLYEGSISRDQVAEVAVEALLCPES---SY 225 (251)
T ss_pred cCCcEEEEECCCccCCCCC---------------------ceEE-ECCCCccccCcccHHHHHHHHHHHhcChhh---cC
Confidence 5899999999999875320 1100 001111123469999999999999864332 24
Q ss_pred cEEEecCCCCCc
Q 010075 327 NIYHVGSSLRNP 338 (519)
Q Consensus 327 ~iyni~s~~~~~ 338 (519)
.++.+.++.+++
T Consensus 226 ~~~~~~~~~~~~ 237 (251)
T PLN00141 226 KVVEIVARADAP 237 (251)
T ss_pred cEEEEecCCCCC
Confidence 688888876654
|
|
| >PRK09135 pteridine reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.78 E-value=2.2e-17 Score=161.22 Aligned_cols=224 Identities=15% Similarity=0.117 Sum_probs=142.9
Q ss_pred cCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 010075 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (519)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (519)
..+++||||||+||||++++++|++.| .+|+++.|+.... .+.+.+. +.... ...+.+
T Consensus 4 ~~~~~vlItGa~g~iG~~l~~~l~~~g---~~v~~~~r~~~~~--~~~~~~~---------~~~~~--------~~~~~~ 61 (249)
T PRK09135 4 DSAKVALITGGARRIGAAIARTLHAAG---YRVAIHYHRSAAE--ADALAAE---------LNALR--------PGSAAA 61 (249)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCC---CEEEEEcCCCHHH--HHHHHHH---------HHhhc--------CCceEE
Confidence 357899999999999999999999988 6788888864321 1111111 11111 145788
Q ss_pred EeccCCCCCCCCChhhhHHHHh-------cCccEEEEcCccCCc-------cccHHHHHHHhHHHHHHHHHHHHhc--cC
Q 010075 90 VPGDISSEDLGLKDSNLKEELW-------NELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKC--VK 153 (519)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~-------~~vdiViH~Aa~v~f-------~~~~~~~~~~Nv~gt~~ll~~a~~~--~~ 153 (519)
+.+|++++ +....++ .++|+|||+||.... .+.++..+++|+.|+.++++.+.+. +.
T Consensus 62 ~~~Dl~~~-------~~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~ 134 (249)
T PRK09135 62 LQADLLDP-------DALPELVAACVAAFGRLDALVNNASSFYPTPLGSITEAQWDDLFASNLKAPFFLSQAAAPQLRKQ 134 (249)
T ss_pred EEcCCCCH-------HHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhchhHHHHHHHHHHHHhhC
Confidence 99999952 2222333 358999999996431 2446778999999999999998642 12
Q ss_pred CceEEEEecceeecCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcHHHH
Q 010075 154 LKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVF 233 (519)
Q Consensus 154 l~~~V~vSTa~v~~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~Y~~ 233 (519)
-..++++|+.. +. .++ .+.+.|+.
T Consensus 135 ~~~~~~~~~~~--~~-------~~~-----------------------------------------------~~~~~Y~~ 158 (249)
T PRK09135 135 RGAIVNITDIH--AE-------RPL-----------------------------------------------KGYPVYCA 158 (249)
T ss_pred CeEEEEEeChh--hc-------CCC-----------------------------------------------CCchhHHH
Confidence 23455444321 11 111 33468999
Q ss_pred HHHHHHHHHHHh----hcCCcEEEEecCccccCCCCCCCcccccccccHHHHHHhhcCCceeeccCCCceeeeeeHHHHH
Q 010075 234 TKTMGEMLMQQS----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVV 309 (519)
Q Consensus 234 sK~~aE~lv~~~----~~~lp~~IvRPs~V~g~~~~p~~gw~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~d~vpVDdva 309 (519)
||+.+|.+++.+ .++++++++||+.++++...+ ++ ..........+.. ..-+.+++|+|
T Consensus 159 sK~~~~~~~~~l~~~~~~~i~~~~v~pg~~~~~~~~~--~~------~~~~~~~~~~~~~---------~~~~~~~~d~a 221 (249)
T PRK09135 159 AKAALEMLTRSLALELAPEVRVNAVAPGAILWPEDGN--SF------DEEARQAILARTP---------LKRIGTPEDIA 221 (249)
T ss_pred HHHHHHHHHHHHHHHHCCCCeEEEEEeccccCccccc--cC------CHHHHHHHHhcCC---------cCCCcCHHHHH
Confidence 999999999875 246999999999999987531 11 1111111111111 11123589999
Q ss_pred HHHHHHHHHhccCCCCCcEEEecCCCCC
Q 010075 310 NAMIVAMVAHAKQPSDANIYHVGSSLRN 337 (519)
Q Consensus 310 ~aii~a~~~~~~~~~~~~iyni~s~~~~ 337 (519)
+++..++... ....+++||+++|...
T Consensus 222 ~~~~~~~~~~--~~~~g~~~~i~~g~~~ 247 (249)
T PRK09135 222 EAVRFLLADA--SFITGQILAVDGGRSL 247 (249)
T ss_pred HHHHHHcCcc--ccccCcEEEECCCeec
Confidence 9997666422 1124789999998653
|
|
| >TIGR01963 PHB_DH 3-hydroxybutyrate dehydrogenase | Back alignment and domain information |
|---|
Probab=99.77 E-value=2.7e-17 Score=161.40 Aligned_cols=234 Identities=15% Similarity=0.101 Sum_probs=148.6
Q ss_pred CCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEEe
Q 010075 12 NKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVP 91 (519)
Q Consensus 12 ~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v~ 91 (519)
+|+||||||||+||+.++++|++.| .+|+++.|+... .+++.+++ .. ...++.++.
T Consensus 1 ~~~vlItGa~g~lG~~l~~~l~~~g---~~v~~~~r~~~~---~~~~~~~~---------~~---------~~~~~~~~~ 56 (255)
T TIGR01963 1 GKTALVTGAASGIGLAIALALAAAG---ANVVVNDLGEAG---AEAAAKVA---------TD---------AGGSVIYLV 56 (255)
T ss_pred CCEEEEcCCcchHHHHHHHHHHHCC---CEEEEEeCCHHH---HHHHHHHH---------Hh---------cCCceEEEE
Confidence 4789999999999999999999988 578999997432 22222111 00 124688999
Q ss_pred ccCCCCCCCCChhhhHHHHhcCccEEEEcCccCCc-------cccHHHHHHHhHHHHHHHHHHHHhc---cCCceEEEEe
Q 010075 92 GDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKC---VKLKVFVHVS 161 (519)
Q Consensus 92 gDl~~~~lgls~~~~~~~l~~~vdiViH~Aa~v~f-------~~~~~~~~~~Nv~gt~~ll~~a~~~---~~l~~~V~vS 161 (519)
+|++++..-....+.......++|+|||+|+.... .+.++..++.|+.|+..+++.+.+. .+.+++|++|
T Consensus 57 ~D~~~~~~~~~~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~~~v~~s 136 (255)
T TIGR01963 57 ADVTKEDEIADMIAAAAAEFGGLDILVNNAGIQHVAPIEEFPPEDWDRIIAIMLTSAFHTIRAALPHMKKQGWGRIINIA 136 (255)
T ss_pred CCCCCHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCeEEEEEc
Confidence 99996320000000111223568999999997542 1345677889999988888776321 2578999999
Q ss_pred cceeecCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcHHHHHHHHHHHH
Q 010075 162 TAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEML 241 (519)
Q Consensus 162 Ta~v~~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~Y~~sK~~aE~l 241 (519)
|...+... +....|+.+|...|.+
T Consensus 137 s~~~~~~~--------------------------------------------------------~~~~~y~~sk~a~~~~ 160 (255)
T TIGR01963 137 SAHGLVAS--------------------------------------------------------PFKSAYVAAKHGLIGL 160 (255)
T ss_pred chhhcCCC--------------------------------------------------------CCCchhHHHHHHHHHH
Confidence 97544321 1235699999988888
Q ss_pred HHHh-----hcCCcEEEEecCccccCCCC-CCC-ccccccccc-HHHHHHhhcCCceeeccCCCceeeeeeHHHHHHHHH
Q 010075 242 MQQS-----KENLSLVIIRPTVVSGTYKE-PFP-GWVEDLKTI-NTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMI 313 (519)
Q Consensus 242 v~~~-----~~~lp~~IvRPs~V~g~~~~-p~~-gw~~~~~~~-~~~i~~~~~g~~~~~~~~~~~~~d~vpVDdva~aii 313 (519)
++.+ ..+++++++||+.++++... .++ .+... ... ...+. .....+....++++++|+|++++
T Consensus 161 ~~~~~~~~~~~~i~v~~i~pg~v~~~~~~~~~~~~~~~~-~~~~~~~~~--------~~~~~~~~~~~~~~~~d~a~~~~ 231 (255)
T TIGR01963 161 TKVLALEVAAHGITVNAICPGYVRTPLVEKQIADQAKTR-GIPEEQVIR--------EVMLPGQPTKRFVTVDEVAETAL 231 (255)
T ss_pred HHHHHHHhhhcCeEEEEEecCccccHHHHHHHHhhhccc-CCCchHHHH--------HHHHccCccccCcCHHHHHHHHH
Confidence 8654 24799999999999887421 010 00000 000 00000 01122345568999999999999
Q ss_pred HHHHHhccCCCCCcEEEecCCC
Q 010075 314 VAMVAHAKQPSDANIYHVGSSL 335 (519)
Q Consensus 314 ~a~~~~~~~~~~~~iyni~s~~ 335 (519)
.++..... ...+++||+++|.
T Consensus 232 ~~~~~~~~-~~~g~~~~~~~g~ 252 (255)
T TIGR01963 232 FLASDAAA-GITGQAIVLDGGW 252 (255)
T ss_pred HHcCcccc-CccceEEEEcCcc
Confidence 99864322 2236789998763
|
This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species. |
| >PRK12826 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed | Back alignment and domain information |
|---|
Probab=99.77 E-value=5.6e-17 Score=158.60 Aligned_cols=222 Identities=14% Similarity=0.102 Sum_probs=150.2
Q ss_pred cCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 010075 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (519)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (519)
+.+|+|+||||||++|++++++|++.| .+|+++.|+.... .... +.++.. ..++.+
T Consensus 4 ~~~~~ilItGasg~iG~~l~~~l~~~g---~~V~~~~r~~~~~---~~~~---------~~l~~~---------~~~~~~ 59 (251)
T PRK12826 4 LEGRVALVTGAARGIGRAIAVRLAADG---AEVIVVDICGDDA---AATA---------ELVEAA---------GGKARA 59 (251)
T ss_pred CCCCEEEEcCCCCcHHHHHHHHHHHCC---CEEEEEeCCHHHH---HHHH---------HHHHhc---------CCeEEE
Confidence 468999999999999999999999988 5789999974321 1111 111111 145889
Q ss_pred EeccCCCCCCCCChhhhHHHHh-------cCccEEEEcCccCCc-------cccHHHHHHHhHHHHHHHHHHHHhc---c
Q 010075 90 VPGDISSEDLGLKDSNLKEELW-------NELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKC---V 152 (519)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~-------~~vdiViH~Aa~v~f-------~~~~~~~~~~Nv~gt~~ll~~a~~~---~ 152 (519)
+.+|++++ +..+.++ ..+|+|||+|+.... .+.+...+++|+.++.++++.+... .
T Consensus 60 ~~~Dl~~~-------~~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~ 132 (251)
T PRK12826 60 RQVDVRDR-------AALKAAVAAGVEDFGRLDILVANAGIFPLTPFAEMDDEQWERVIDVNLTGTFLLTQAALPALIRA 132 (251)
T ss_pred EECCCCCH-------HHHHHHHHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc
Confidence 99999953 2223333 369999999988654 2456778999999999999887421 3
Q ss_pred CCceEEEEecceeecCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcHHH
Q 010075 153 KLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYV 232 (519)
Q Consensus 153 ~l~~~V~vSTa~v~~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~Y~ 232 (519)
+.++||++||...+... . .....|+
T Consensus 133 ~~~~ii~~ss~~~~~~~--------~-----------------------------------------------~~~~~y~ 157 (251)
T PRK12826 133 GGGRIVLTSSVAGPRVG--------Y-----------------------------------------------PGLAHYA 157 (251)
T ss_pred CCcEEEEEechHhhccC--------C-----------------------------------------------CCccHHH
Confidence 56789999998654110 0 1235799
Q ss_pred HHHHHHHHHHHHh-----hcCCcEEEEecCccccCCCCCCCcccccccccHHHHHHhhcCCceeeccCCCceeeeeeHHH
Q 010075 233 FTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDM 307 (519)
Q Consensus 233 ~sK~~aE~lv~~~-----~~~lp~~IvRPs~V~g~~~~p~~gw~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~d~vpVDd 307 (519)
.+|+.+|.+++.+ ..+++++++||+.++|+...+... ..+......+ .....+++++|
T Consensus 158 ~sK~a~~~~~~~~~~~~~~~~i~~~~i~pg~~~~~~~~~~~~--------~~~~~~~~~~---------~~~~~~~~~~d 220 (251)
T PRK12826 158 ASKAGLVGFTRALALELAARNITVNSVHPGGVDTPMAGNLGD--------AQWAEAIAAA---------IPLGRLGEPED 220 (251)
T ss_pred HHHHHHHHHHHHHHHHHHHcCeEEEEEeeCCCCcchhhhcCc--------hHHHHHHHhc---------CCCCCCcCHHH
Confidence 9999999988765 347999999999999976432211 0001111111 01124789999
Q ss_pred HHHHHHHHHHHhccCCCCCcEEEecCCC
Q 010075 308 VVNAMIVAMVAHAKQPSDANIYHVGSSL 335 (519)
Q Consensus 308 va~aii~a~~~~~~~~~~~~iyni~s~~ 335 (519)
+|+++..++..... ...+++|++.+|.
T Consensus 221 va~~~~~l~~~~~~-~~~g~~~~~~~g~ 247 (251)
T PRK12826 221 IAAAVLFLASDEAR-YITGQTLPVDGGA 247 (251)
T ss_pred HHHHHHHHhCcccc-CcCCcEEEECCCc
Confidence 99999887743221 2247899998874
|
|
| >PRK06914 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.77 E-value=1.8e-17 Score=165.36 Aligned_cols=236 Identities=13% Similarity=0.099 Sum_probs=146.5
Q ss_pred cCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 010075 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (519)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (519)
+++++++||||||++|+++++.|++.| .+|+++.|+..... .+.+++ +.. ....++++
T Consensus 1 ~~~k~~lItGasg~iG~~la~~l~~~G---~~V~~~~r~~~~~~---~~~~~~---------~~~-------~~~~~~~~ 58 (280)
T PRK06914 1 MNKKIAIVTGASSGFGLLTTLELAKKG---YLVIATMRNPEKQE---NLLSQA---------TQL-------NLQQNIKV 58 (280)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHhCC---CEEEEEeCCHHHHH---HHHHHH---------Hhc-------CCCCceeE
Confidence 357899999999999999999999988 67888888753221 111110 100 01247889
Q ss_pred EeccCCCCCCCCChhhhHHHHhcCccEEEEcCccCCc-------cccHHHHHHHhHHHHHHHHHHHHhc---cCCceEEE
Q 010075 90 VPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKC---VKLKVFVH 159 (519)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~~~vdiViH~Aa~v~f-------~~~~~~~~~~Nv~gt~~ll~~a~~~---~~l~~~V~ 159 (519)
+.+|++++..-.. .+........+|+|||+|+.... .+.++..+++|+.|+.++++.+... .+..++|+
T Consensus 59 ~~~D~~d~~~~~~-~~~~~~~~~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~ 137 (280)
T PRK06914 59 QQLDVTDQNSIHN-FQLVLKEIGRIDLLVNNAGYANGGFVEEIPVEEYRKQFETNVFGAISVTQAVLPYMRKQKSGKIIN 137 (280)
T ss_pred EecCCCCHHHHHH-HHHHHHhcCCeeEEEECCcccccCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEE
Confidence 9999996421000 00011122468999999987542 1456677889999999888876321 25678999
Q ss_pred EecceeecCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcHHHHHHHHHH
Q 010075 160 VSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGE 239 (519)
Q Consensus 160 vSTa~v~~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~Y~~sK~~aE 239 (519)
+||....... .....|+.||+..|
T Consensus 138 vsS~~~~~~~--------------------------------------------------------~~~~~Y~~sK~~~~ 161 (280)
T PRK06914 138 ISSISGRVGF--------------------------------------------------------PGLSPYVSSKYALE 161 (280)
T ss_pred ECcccccCCC--------------------------------------------------------CCCchhHHhHHHHH
Confidence 9986443211 12357999999999
Q ss_pred HHHHHh-----hcCCcEEEEecCccccCCCCCCCccccc---cccc-HHHHHHhhcCCceeeccCCCceeeeeeHHHHHH
Q 010075 240 MLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVED---LKTI-NTLFVASAQGNLRCLVGETKVIMDVIPVDMVVN 310 (519)
Q Consensus 240 ~lv~~~-----~~~lp~~IvRPs~V~g~~~~p~~gw~~~---~~~~-~~~i~~~~~g~~~~~~~~~~~~~d~vpVDdva~ 310 (519)
.+++.+ ..+++++++|||.+.++..++....... .... ...+.... ..+ ......+++++|+|+
T Consensus 162 ~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~---~~~~~~~~~~~dva~ 234 (280)
T PRK06914 162 GFSESLRLELKPFGIDVALIEPGSYNTNIWEVGKQLAENQSETTSPYKEYMKKIQ----KHI---NSGSDTFGNPIDVAN 234 (280)
T ss_pred HHHHHHHHHhhhhCCEEEEEecCCcccchhhccccccccccccccchHHHHHHHH----HHH---hhhhhccCCHHHHHH
Confidence 888764 3479999999999988743221110000 0000 01111110 000 012235688999999
Q ss_pred HHHHHHHHhccCCCCCcEEEecCCC
Q 010075 311 AMIVAMVAHAKQPSDANIYHVGSSL 335 (519)
Q Consensus 311 aii~a~~~~~~~~~~~~iyni~s~~ 335 (519)
+++.++.+... ...||++++.
T Consensus 235 ~~~~~~~~~~~----~~~~~~~~~~ 255 (280)
T PRK06914 235 LIVEIAESKRP----KLRYPIGKGV 255 (280)
T ss_pred HHHHHHcCCCC----CcccccCCch
Confidence 99999874322 2468888763
|
|
| >PF03015 Sterile: Male sterility protein; InterPro: IPR004262 This family represents the C-terminal region of the male sterility protein in a number of organisms | Back alignment and domain information |
|---|
Probab=99.76 E-value=6.1e-19 Score=146.48 Aligned_cols=85 Identities=27% Similarity=0.473 Sum_probs=77.5
Q ss_pred HHHHHHHHHHHHhhhhHHH-------HHHHHHHhcccccccceEEechhHHHHHHHhcCCCCCCccccCCCCCCCHHHHH
Q 010075 348 TVFHNFFKGVYNDLRKKVK-------FVMRVVEIYKPYFYFNGIFDDTNTEKLRMTARGSRTETDLFYFDPDSIEWSDYF 420 (519)
Q Consensus 348 ~~~p~~~~~~~~~~~~~~~-------~~~~~~~~~~~f~~~~w~F~~~n~~~L~~~l~~~Dr~~~~F~fD~~~idW~~Y~ 420 (519)
+.+|+.+.|.+.++.|+.+ ++..+.+++++|++++|.|+++|+++|++.|+++|++ +|+||++.|||++|+
T Consensus 3 h~lPA~~~D~~~~l~g~kp~~~k~~~ki~~~~~~~~~F~~~eW~F~~~n~~~L~~~l~~~D~~--~F~fD~~~idW~~Y~ 80 (94)
T PF03015_consen 3 HFLPAYLLDLILRLFGQKPRMVKIYRKIRKALEVLEYFTTNEWIFDNDNTRRLWERLSPEDRE--IFNFDIRSIDWEEYF 80 (94)
T ss_pred chHHHHHHHHHHHHhCCChHHHHHHHHHHHHHHHHHHHHhCceeecchHHHHHHHhCchhcCc--eecCCCCCCCHHHHH
Confidence 5689999999998877644 4666788899999999999999999999999999987 999999999999999
Q ss_pred hhcchhhHHHHHhCC
Q 010075 421 MNTHIPGVEKLLQQK 435 (519)
Q Consensus 421 ~~~~~~Girkyllke 435 (519)
.++ ++|+|||++||
T Consensus 81 ~~~-~~G~rkyllke 94 (94)
T PF03015_consen 81 RNY-IPGIRKYLLKE 94 (94)
T ss_pred HHH-HHHHHHHHhCC
Confidence 996 99999999997
|
The Arabidopsis thaliana male sterility 2 (MS2) protein is involved in male gametogenesis. The MS2 protein shows sequence similarity to a jojoba protein (also a member of this group) that converts wax fatty acids to fatty alcohols. It has been suggested that a possible function of the MS2 protein may be as a fatty acyl reductase in the formation of pollen wall substances [].; GO: 0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor, 0055114 oxidation-reduction process |
| >PRK12429 3-hydroxybutyrate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.76 E-value=5.6e-17 Score=159.37 Aligned_cols=228 Identities=14% Similarity=0.103 Sum_probs=146.6
Q ss_pred cCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 010075 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (519)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (519)
+++++|+||||||++|++++++|++.| .+|+++.|+.... +++.+++ +. ...++..
T Consensus 2 ~~~~~vlItG~sg~iG~~la~~l~~~g---~~v~~~~r~~~~~---~~~~~~~---------~~---------~~~~~~~ 57 (258)
T PRK12429 2 LKGKVALVTGAASGIGLEIALALAKEG---AKVVIADLNDEAA---AAAAEAL---------QK---------AGGKAIG 57 (258)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCC---CeEEEEeCCHHHH---HHHHHHH---------Hh---------cCCcEEE
Confidence 467999999999999999999999988 5788998875332 2221111 11 1256889
Q ss_pred EeccCCCCCCCCChhhhHHHHh-------cCccEEEEcCccCCc-------cccHHHHHHHhHHHHHHHHHHH----Hhc
Q 010075 90 VPGDISSEDLGLKDSNLKEELW-------NELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFA----KKC 151 (519)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~-------~~vdiViH~Aa~v~f-------~~~~~~~~~~Nv~gt~~ll~~a----~~~ 151 (519)
+.+|+++++ + ...+. ..+|+|||+|+.... .+.++..+++|+.|+..+++.+ ++
T Consensus 58 ~~~Dl~~~~------~-~~~~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~- 129 (258)
T PRK12429 58 VAMDVTDEE------A-INAGIDYAVETFGGVDILVNNAGIQHVAPIEDFPTEKWKKMIAIMLDGAFLTTKAALPIMKA- 129 (258)
T ss_pred EEcCCCCHH------H-HHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHhhcchhhHHHHHHHHHHHHh-
Confidence 999999632 2 22322 368999999997543 2345667889999965555444 44
Q ss_pred cCCceEEEEecceeecCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcHH
Q 010075 152 VKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTY 231 (519)
Q Consensus 152 ~~l~~~V~vSTa~v~~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~Y 231 (519)
.+.++||++||....... ...+.|
T Consensus 130 ~~~~~iv~iss~~~~~~~--------------------------------------------------------~~~~~y 153 (258)
T PRK12429 130 QGGGRIINMASVHGLVGS--------------------------------------------------------AGKAAY 153 (258)
T ss_pred cCCeEEEEEcchhhccCC--------------------------------------------------------CCcchh
Confidence 367899999997554321 123568
Q ss_pred HHHHHHHHHHHHHh-----hcCCcEEEEecCccccCCCCCC-Ccccccccc-cHHHHHHhhcCCceeeccCCCceeeeee
Q 010075 232 VFTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPF-PGWVEDLKT-INTLFVASAQGNLRCLVGETKVIMDVIP 304 (519)
Q Consensus 232 ~~sK~~aE~lv~~~-----~~~lp~~IvRPs~V~g~~~~p~-~gw~~~~~~-~~~~i~~~~~g~~~~~~~~~~~~~d~vp 304 (519)
+.+|+..+.+++.+ ..++.+.++||+.+.++...+. +.-...... ....... .........++++
T Consensus 154 ~~~k~a~~~~~~~l~~~~~~~~i~v~~~~pg~v~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~ 225 (258)
T PRK12429 154 VSAKHGLIGLTKVVALEGATHGVTVNAICPGYVDTPLVRKQIPDLAKERGISEEEVLED--------VLLPLVPQKRFTT 225 (258)
T ss_pred HHHHHHHHHHHHHHHHHhcccCeEEEEEecCCCcchhhhhhhhhhccccCCChHHHHHH--------HHhccCCccccCC
Confidence 99998888777654 3579999999999988754211 000000000 0001100 1122223457999
Q ss_pred HHHHHHHHHHHHHHhccCCCCCcEEEecCC
Q 010075 305 VDMVVNAMIVAMVAHAKQPSDANIYHVGSS 334 (519)
Q Consensus 305 VDdva~aii~a~~~~~~~~~~~~iyni~s~ 334 (519)
++|+|++++.++..... ...+++|++.+|
T Consensus 226 ~~d~a~~~~~l~~~~~~-~~~g~~~~~~~g 254 (258)
T PRK12429 226 VEEIADYALFLASFAAK-GVTGQAWVVDGG 254 (258)
T ss_pred HHHHHHHHHHHcCcccc-CccCCeEEeCCC
Confidence 99999999888764322 123678999876
|
|
| >PRK07067 sorbitol dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.75 E-value=2.8e-17 Score=161.87 Aligned_cols=228 Identities=18% Similarity=0.211 Sum_probs=150.1
Q ss_pred cCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 010075 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (519)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (519)
+.+++|+||||||+||.++++.|++.| .+|+++.|+... .+++.+ + ...++.+
T Consensus 4 l~~~~vlItGas~~iG~~ia~~l~~~G---~~v~~~~r~~~~---~~~~~~-------------~--------~~~~~~~ 56 (257)
T PRK07067 4 LQGKVALLTGAASGIGEAVAERYLAEG---ARVVIADIKPAR---ARLAAL-------------E--------IGPAAIA 56 (257)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHcC---CEEEEEcCCHHH---HHHHHH-------------H--------hCCceEE
Confidence 568999999999999999999999998 678888886432 112111 1 1245788
Q ss_pred EeccCCCCCCCCChhhhHHHHh-------cCccEEEEcCccCCc-------cccHHHHHHHhHHHHHHHHHHHHhc--c-
Q 010075 90 VPGDISSEDLGLKDSNLKEELW-------NELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKC--V- 152 (519)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~-------~~vdiViH~Aa~v~f-------~~~~~~~~~~Nv~gt~~ll~~a~~~--~- 152 (519)
+.+|+++++ ..+.++ .++|++||+||.... .+.++..+++|+.++..+++++... .
T Consensus 57 ~~~D~~~~~-------~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~ 129 (257)
T PRK07067 57 VSLDVTRQD-------SIDRIVAAAVERFGGIDILFNNAALFDMAPILDISRDSYDRLFAVNVKGLFFLMQAVARHMVEQ 129 (257)
T ss_pred EEccCCCHH-------HHHHHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHhhhhhHHHHHHHHHHHHHhc
Confidence 999999642 222322 368999999997542 2457788999999999999998642 1
Q ss_pred -CCceEEEEecceeecCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcHH
Q 010075 153 -KLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTY 231 (519)
Q Consensus 153 -~l~~~V~vSTa~v~~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~Y 231 (519)
.-.++|++||....... .+...|
T Consensus 130 ~~~~~iv~~sS~~~~~~~--------------------------------------------------------~~~~~Y 153 (257)
T PRK07067 130 GRGGKIINMASQAGRRGE--------------------------------------------------------ALVSHY 153 (257)
T ss_pred CCCcEEEEeCCHHhCCCC--------------------------------------------------------CCCchh
Confidence 12479999996322110 123579
Q ss_pred HHHHHHHHHHHHHh-----hcCCcEEEEecCccccCCCCCCCcccccccccHHHHHHhhcCCceeeccCCCceeeeeeHH
Q 010075 232 VFTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVD 306 (519)
Q Consensus 232 ~~sK~~aE~lv~~~-----~~~lp~~IvRPs~V~g~~~~p~~gw~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~d~vpVD 306 (519)
+.||+..+.+++.. ..++++++++||.|.++..+............ ..+......+.+.....+++++
T Consensus 154 ~~sK~a~~~~~~~la~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~ 226 (257)
T PRK07067 154 CATKAAVISYTQSAALALIRHGINVNAIAPGVVDTPMWDQVDALFARYENR-------PPGEKKRLVGEAVPLGRMGVPD 226 (257)
T ss_pred hhhHHHHHHHHHHHHHHhcccCeEEEEEeeCcccchhhhhhhhhhhhccCC-------CHHHHHHHHhhcCCCCCccCHH
Confidence 99999988888754 35799999999999886432110000000000 0000011122333456789999
Q ss_pred HHHHHHHHHHHHhccCCCCCcEEEecCCC
Q 010075 307 MVVNAMIVAMVAHAKQPSDANIYHVGSSL 335 (519)
Q Consensus 307 dva~aii~a~~~~~~~~~~~~iyni~s~~ 335 (519)
|+|++++.++.... ..-.+.+|++.+|.
T Consensus 227 dva~~~~~l~s~~~-~~~~g~~~~v~gg~ 254 (257)
T PRK07067 227 DLTGMALFLASADA-DYIVAQTYNVDGGN 254 (257)
T ss_pred HHHHHHHHHhCccc-ccccCcEEeecCCE
Confidence 99999999886432 22236899998874
|
|
| >PRK12746 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.75 E-value=1.1e-16 Score=157.34 Aligned_cols=221 Identities=17% Similarity=0.179 Sum_probs=143.9
Q ss_pred cCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEE-EecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceE
Q 010075 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLF-VRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKIT 88 (519)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~L-vR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~ 88 (519)
+++++|+||||||+||+++++.|++.| .+|.++ .|+.. ..+.+. +.+.. ...++.
T Consensus 4 ~~~~~ilItGasg~iG~~la~~l~~~G---~~v~i~~~r~~~---~~~~~~---------~~~~~---------~~~~~~ 59 (254)
T PRK12746 4 LDGKVALVTGASRGIGRAIAMRLANDG---ALVAIHYGRNKQ---AADETI---------REIES---------NGGKAF 59 (254)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCC---CEEEEEcCCCHH---HHHHHH---------HHHHh---------cCCcEE
Confidence 467999999999999999999999988 456554 45421 111111 11111 024678
Q ss_pred EEeccCCCCCCCCChhhhHHHHh-------------cCccEEEEcCccCCc-------cccHHHHHHHhHHHHHHHHHHH
Q 010075 89 FVPGDISSEDLGLKDSNLKEELW-------------NELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFA 148 (519)
Q Consensus 89 ~v~gDl~~~~lgls~~~~~~~l~-------------~~vdiViH~Aa~v~f-------~~~~~~~~~~Nv~gt~~ll~~a 148 (519)
++.+|++++ ++. ..++ .++|+|||+||.... .+.++..+++|+.|+.++++.+
T Consensus 60 ~~~~D~~d~------~~i-~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~ 132 (254)
T PRK12746 60 LIEADLNSI------DGV-KKLVEQLKNELQIRVGTSEIDILVNNAGIGTQGTIENTTEEIFDEIMAVNIKAPFFLIQQT 132 (254)
T ss_pred EEEcCcCCH------HHH-HHHHHHHHHHhccccCCCCccEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHH
Confidence 999999963 222 2222 258999999997532 1235677889999999999988
Q ss_pred Hhc-cCCceEEEEecceeecCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCC
Q 010075 149 KKC-VKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGW 227 (519)
Q Consensus 149 ~~~-~~l~~~V~vSTa~v~~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~ 227 (519)
.+. .+..++|++||..++... ..
T Consensus 133 ~~~~~~~~~~v~~sS~~~~~~~--------------------------------------------------------~~ 156 (254)
T PRK12746 133 LPLLRAEGRVINISSAEVRLGF--------------------------------------------------------TG 156 (254)
T ss_pred HHHhhcCCEEEEECCHHhcCCC--------------------------------------------------------CC
Confidence 753 344689999998665321 12
Q ss_pred CcHHHHHHHHHHHHHHHh-----hcCCcEEEEecCccccCCCCCCCcccccccccHHHHHHhhcCCceeeccCCCceeee
Q 010075 228 PNTYVFTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDV 302 (519)
Q Consensus 228 ~n~Y~~sK~~aE~lv~~~-----~~~lp~~IvRPs~V~g~~~~p~~gw~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~d~ 302 (519)
...|+.||+..|.+++.. ..++++++++||.+.++...... .. ..+.....+ ......+
T Consensus 157 ~~~Y~~sK~a~~~~~~~~~~~~~~~~i~v~~v~pg~~~t~~~~~~~---~~-----~~~~~~~~~--------~~~~~~~ 220 (254)
T PRK12746 157 SIAYGLSKGALNTMTLPLAKHLGERGITVNTIMPGYTKTDINAKLL---DD-----PEIRNFATN--------SSVFGRI 220 (254)
T ss_pred CcchHhhHHHHHHHHHHHHHHHhhcCcEEEEEEECCccCcchhhhc---cC-----hhHHHHHHh--------cCCcCCC
Confidence 356999999999987655 34799999999999876542110 00 011111111 1112356
Q ss_pred eeHHHHHHHHHHHHHHhccCCCCCcEEEecCC
Q 010075 303 IPVDMVVNAMIVAMVAHAKQPSDANIYHVGSS 334 (519)
Q Consensus 303 vpVDdva~aii~a~~~~~~~~~~~~iyni~s~ 334 (519)
++++|+|+++..++.... ..-.+++||++++
T Consensus 221 ~~~~dva~~~~~l~~~~~-~~~~g~~~~i~~~ 251 (254)
T PRK12746 221 GQVEDIADAVAFLASSDS-RWVTGQIIDVSGG 251 (254)
T ss_pred CCHHHHHHHHHHHcCccc-CCcCCCEEEeCCC
Confidence 789999999987775322 2123679999876
|
|
| >PRK12825 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.75 E-value=1.1e-16 Score=155.85 Aligned_cols=221 Identities=15% Similarity=0.162 Sum_probs=148.6
Q ss_pred cCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 010075 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (519)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (519)
+++|+|+||||||++|+.|+++|++.| .+|+++.|+.... .+.+.+. +.. ...++.+
T Consensus 4 ~~~~~vlItGasg~iG~~l~~~l~~~g---~~v~~~~~~~~~~--~~~~~~~---------~~~---------~~~~~~~ 60 (249)
T PRK12825 4 LMGRVALVTGAARGLGRAIALRLARAG---ADVVVHYRSDEEA--AEELVEA---------VEA---------LGRRAQA 60 (249)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCC---CeEEEEeCCCHHH--HHHHHHH---------HHh---------cCCceEE
Confidence 456899999999999999999999998 4566667664321 1222111 110 1256889
Q ss_pred EeccCCCCCCCCChhhhHHHHh-------cCccEEEEcCccCCc-------cccHHHHHHHhHHHHHHHHHHHHh---cc
Q 010075 90 VPGDISSEDLGLKDSNLKEELW-------NELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKK---CV 152 (519)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~-------~~vdiViH~Aa~v~f-------~~~~~~~~~~Nv~gt~~ll~~a~~---~~ 152 (519)
+.+|++++ +....++ .++|+|||+||.... .+.+...+++|+.++.++++.+.+ ..
T Consensus 61 ~~~D~~~~-------~~v~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~ 133 (249)
T PRK12825 61 VQADVTDK-------AALEAAVAAAVERFGRIDILVNNAGIFEDKPLADMSDDEWDEVIDVNLSGVFHLLRAVVPPMRKQ 133 (249)
T ss_pred EECCcCCH-------HHHHHHHHHHHHHcCCCCEEEECCccCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc
Confidence 99999963 2222322 468999999996532 234677799999999999988732 12
Q ss_pred CCceEEEEecceeecCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcHHH
Q 010075 153 KLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYV 232 (519)
Q Consensus 153 ~l~~~V~vSTa~v~~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~Y~ 232 (519)
+.++||++||...+... .....|+
T Consensus 134 ~~~~~i~~SS~~~~~~~--------------------------------------------------------~~~~~y~ 157 (249)
T PRK12825 134 RGGRIVNISSVAGLPGW--------------------------------------------------------PGRSNYA 157 (249)
T ss_pred CCCEEEEECccccCCCC--------------------------------------------------------CCchHHH
Confidence 57899999998765321 1235699
Q ss_pred HHHHHHHHHHHHh-----hcCCcEEEEecCccccCCCCCCCcccccccccHHHHHHhhcCCceeeccCCCceeeeeeHHH
Q 010075 233 FTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDM 307 (519)
Q Consensus 233 ~sK~~aE~lv~~~-----~~~lp~~IvRPs~V~g~~~~p~~gw~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~d~vpVDd 307 (519)
.+|+..|.+++.+ ..+++++++||+.++++...+.. ....... . . ......+++++|
T Consensus 158 ~sK~~~~~~~~~~~~~~~~~~i~~~~i~pg~~~~~~~~~~~--------~~~~~~~---~-----~--~~~~~~~~~~~d 219 (249)
T PRK12825 158 AAKAGLVGLTKALARELAEYGITVNMVAPGDIDTDMKEATI--------EEAREAK---D-----A--ETPLGRSGTPED 219 (249)
T ss_pred HHHHHHHHHHHHHHHHHhhcCeEEEEEEECCccCCcccccc--------chhHHhh---h-----c--cCCCCCCcCHHH
Confidence 9999999888754 35899999999999998653211 0011110 0 0 011223799999
Q ss_pred HHHHHHHHHHHhccCCCCCcEEEecCCC
Q 010075 308 VVNAMIVAMVAHAKQPSDANIYHVGSSL 335 (519)
Q Consensus 308 va~aii~a~~~~~~~~~~~~iyni~s~~ 335 (519)
+++++..++.... ....+++|++++|.
T Consensus 220 va~~~~~~~~~~~-~~~~g~~~~i~~g~ 246 (249)
T PRK12825 220 IARAVAFLCSDAS-DYITGQVIEVTGGV 246 (249)
T ss_pred HHHHHHHHhCccc-cCcCCCEEEeCCCE
Confidence 9999988885332 22247899999874
|
|
| >PLN03209 translocon at the inner envelope of chloroplast subunit 62; Provisional | Back alignment and domain information |
|---|
Probab=99.75 E-value=9.7e-17 Score=170.98 Aligned_cols=237 Identities=16% Similarity=0.144 Sum_probs=154.3
Q ss_pred hhcCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCce
Q 010075 8 EFLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKI 87 (519)
Q Consensus 8 ~~~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v 87 (519)
+.+.|++|||||||||||++++++|++.| .+|++++|+.... +++.+++.+.. +... + .....++
T Consensus 76 ~~~~gKvVLVTGATGgIG~aLAr~LLk~G---~~Vval~Rn~ekl---~~l~~~l~~~~----L~~~-G----a~~~~~v 140 (576)
T PLN03209 76 DTKDEDLAFVAGATGKVGSRTVRELLKLG---FRVRAGVRSAQRA---ESLVQSVKQMK----LDVE-G----TQPVEKL 140 (576)
T ss_pred ccCCCCEEEEECCCCHHHHHHHHHHHHCC---CeEEEEeCCHHHH---HHHHHHhhhhc----cccc-c----ccccCce
Confidence 45678999999999999999999999988 6788999975322 22211110000 0000 0 0012468
Q ss_pred EEEeccCCCCCCCCChhhhHHHHhcCccEEEEcCccCCcc-ccHHHHHHHhHHHHHHHHHHHHhccCCceEEEEecceee
Q 010075 88 TFVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKFD-ERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAYVA 166 (519)
Q Consensus 88 ~~v~gDl~~~~lgls~~~~~~~l~~~vdiViH~Aa~v~f~-~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V~vSTa~v~ 166 (519)
.++.||+++ .+.....+.++|+|||+||..... ..+...+++|+.|+.+++++|++. ++++||++||.+++
T Consensus 141 ~iV~gDLtD-------~esI~~aLggiDiVVn~AG~~~~~v~d~~~~~~VN~~Gt~nLl~Aa~~a-gVgRIV~VSSiga~ 212 (576)
T PLN03209 141 EIVECDLEK-------PDQIGPALGNASVVICCIGASEKEVFDVTGPYRIDYLATKNLVDAATVA-KVNHFILVTSLGTN 212 (576)
T ss_pred EEEEecCCC-------HHHHHHHhcCCCEEEEccccccccccchhhHHHHHHHHHHHHHHHHHHh-CCCEEEEEccchhc
Confidence 899999994 333456778999999999875321 235667889999999999999986 78999999998653
Q ss_pred cCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcHHHHHHHHHHHHHHHhh
Q 010075 167 GERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLMQQSK 246 (519)
Q Consensus 167 ~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~Y~~sK~~aE~lv~~~~ 246 (519)
.... .+..+ .....|...|..+|..+..
T Consensus 213 ~~g~---p~~~~-----------------------------------------------~sk~~~~~~KraaE~~L~~-- 240 (576)
T PLN03209 213 KVGF---PAAIL-----------------------------------------------NLFWGVLCWKRKAEEALIA-- 240 (576)
T ss_pred ccCc---cccch-----------------------------------------------hhHHHHHHHHHHHHHHHHH--
Confidence 1100 00000 1123577788889988876
Q ss_pred cCCcEEEEecCccccCCCCCCCcccccccccHHHHHHhhcCCceeeccCCCceeeeeeHHHHHHHHHHHHHHhccCCCCC
Q 010075 247 ENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMIVAMVAHAKQPSDA 326 (519)
Q Consensus 247 ~~lp~~IvRPs~V~g~~~~p~~gw~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~d~vpVDdva~aii~a~~~~~~~~~~~ 326 (519)
.++++++||||.+.++..+. . .. +.......+ ....-.+..+|||++++.++..... ..+
T Consensus 241 sGIrvTIVRPG~L~tp~d~~-~---~t-------------~~v~~~~~d-~~~gr~isreDVA~vVvfLasd~~a--s~~ 300 (576)
T PLN03209 241 SGLPYTIVRPGGMERPTDAY-K---ET-------------HNLTLSEED-TLFGGQVSNLQVAELMACMAKNRRL--SYC 300 (576)
T ss_pred cCCCEEEEECCeecCCcccc-c---cc-------------cceeecccc-ccCCCccCHHHHHHHHHHHHcCchh--ccc
Confidence 68999999999998653321 0 00 000000011 1112347889999999998864322 236
Q ss_pred cEEEecCCCCCch
Q 010075 327 NIYHVGSSLRNPV 339 (519)
Q Consensus 327 ~iyni~s~~~~~i 339 (519)
.+|.+.++...|.
T Consensus 301 kvvevi~~~~~p~ 313 (576)
T PLN03209 301 KVVEVIAETTAPL 313 (576)
T ss_pred eEEEEEeCCCCCC
Confidence 7999988865544
|
|
| >PRK07774 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.74 E-value=3.8e-16 Score=152.93 Aligned_cols=219 Identities=18% Similarity=0.170 Sum_probs=147.1
Q ss_pred cCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 010075 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (519)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (519)
+++|+++||||||+||+++++.|++.| .+|+++.|+.... +++.++ ++.. ..++..
T Consensus 4 ~~~k~vlItGasg~iG~~la~~l~~~g---~~vi~~~r~~~~~---~~~~~~---------~~~~---------~~~~~~ 59 (250)
T PRK07774 4 FDDKVAIVTGAAGGIGQAYAEALAREG---ASVVVADINAEGA---ERVAKQ---------IVAD---------GGTAIA 59 (250)
T ss_pred cCCCEEEEECCCchHHHHHHHHHHHCC---CEEEEEeCCHHHH---HHHHHH---------HHhc---------CCcEEE
Confidence 467999999999999999999999988 5788988874321 222211 1110 135678
Q ss_pred EeccCCCCCCCCChhhhHHHH-------hcCccEEEEcCccCCc----------cccHHHHHHHhHHHHHHHHHHHHhc-
Q 010075 90 VPGDISSEDLGLKDSNLKEEL-------WNELDIMVNSAAITKF----------DERYDVAFGINTLGVIHLVNFAKKC- 151 (519)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l-------~~~vdiViH~Aa~v~f----------~~~~~~~~~~Nv~gt~~ll~~a~~~- 151 (519)
+.+|++++. + .+.+ ...+|+|||+||.... .+.++..+++|+.|+.++++++.+.
T Consensus 60 ~~~Dl~~~~------~-~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~ 132 (250)
T PRK07774 60 VQVDVSDPD------S-AKAMADATVSAFGGIDYLVNNAAIYGGMKLDLLITVPWDYYKKFMSVNLDGALVCTRAVYKHM 132 (250)
T ss_pred EEcCCCCHH------H-HHHHHHHHHHHhCCCCEEEECCCCcCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHH
Confidence 899999632 2 2222 2368999999997421 1345667899999999999988753
Q ss_pred --cCCceEEEEecceeecCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCc
Q 010075 152 --VKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPN 229 (519)
Q Consensus 152 --~~l~~~V~vSTa~v~~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n 229 (519)
.+.+++|++||..++. +.+
T Consensus 133 ~~~~~~~iv~~sS~~~~~-----------------------------------------------------------~~~ 153 (250)
T PRK07774 133 AKRGGGAIVNQSSTAAWL-----------------------------------------------------------YSN 153 (250)
T ss_pred HHhCCcEEEEEecccccC-----------------------------------------------------------Ccc
Confidence 2346899999976542 134
Q ss_pred HHHHHHHHHHHHHHHh-----hcCCcEEEEecCccccCCCCCCCcccccccccHHHHHHhhcCCceeeccCCCceeeeee
Q 010075 230 TYVFTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIP 304 (519)
Q Consensus 230 ~Y~~sK~~aE~lv~~~-----~~~lp~~IvRPs~V~g~~~~p~~gw~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~d~vp 304 (519)
.|+.||+..|.+++.. ..++++++++||.+..+..... .+..+.....++... .-+..
T Consensus 154 ~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~~--------~~~~~~~~~~~~~~~---------~~~~~ 216 (250)
T PRK07774 154 FYGLAKVGLNGLTQQLARELGGMNIRVNAIAPGPIDTEATRTV--------TPKEFVADMVKGIPL---------SRMGT 216 (250)
T ss_pred ccHHHHHHHHHHHHHHHHHhCccCeEEEEEecCcccCcccccc--------CCHHHHHHHHhcCCC---------CCCcC
Confidence 6999999999988765 3479999999998876543211 111222222222211 11356
Q ss_pred HHHHHHHHHHHHHHhccCCCCCcEEEecCCCC
Q 010075 305 VDMVVNAMIVAMVAHAKQPSDANIYHVGSSLR 336 (519)
Q Consensus 305 VDdva~aii~a~~~~~~~~~~~~iyni~s~~~ 336 (519)
++|+|++++.++..... ...+++||+.+|..
T Consensus 217 ~~d~a~~~~~~~~~~~~-~~~g~~~~v~~g~~ 247 (250)
T PRK07774 217 PEDLVGMCLFLLSDEAS-WITGQIFNVDGGQI 247 (250)
T ss_pred HHHHHHHHHHHhChhhh-CcCCCEEEECCCee
Confidence 89999999888764321 12368999998743
|
|
| >PRK06182 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.74 E-value=1.4e-16 Score=158.44 Aligned_cols=238 Identities=16% Similarity=0.127 Sum_probs=147.5
Q ss_pred CCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEE
Q 010075 11 ENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFV 90 (519)
Q Consensus 11 ~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v 90 (519)
++|+|+||||||+||+++++.|++.| .+|+++.|+... .+.+. ..++.++
T Consensus 2 ~~k~vlItGasggiG~~la~~l~~~G---~~V~~~~r~~~~---l~~~~------------------------~~~~~~~ 51 (273)
T PRK06182 2 QKKVALVTGASSGIGKATARRLAAQG---YTVYGAARRVDK---MEDLA------------------------SLGVHPL 51 (273)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCC---CEEEEEeCCHHH---HHHHH------------------------hCCCeEE
Confidence 57999999999999999999999988 678888887421 11111 1357889
Q ss_pred eccCCCCCCCCChhhhHHHHh-------cCccEEEEcCccCCc-------cccHHHHHHHhHHHHHHHH----HHHHhcc
Q 010075 91 PGDISSEDLGLKDSNLKEELW-------NELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLV----NFAKKCV 152 (519)
Q Consensus 91 ~gDl~~~~lgls~~~~~~~l~-------~~vdiViH~Aa~v~f-------~~~~~~~~~~Nv~gt~~ll----~~a~~~~ 152 (519)
.+|++++ +..+.++ .++|+|||+||.... .+.++..+++|+.|+..++ +.+++.
T Consensus 52 ~~Dv~~~-------~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~- 123 (273)
T PRK06182 52 SLDVTDE-------ASIKAAVDTIIAEEGRIDVLVNNAGYGSYGAIEDVPIDEARRQFEVNLFGAARLTQLVLPHMRAQ- 123 (273)
T ss_pred EeeCCCH-------HHHHHHHHHHHHhcCCCCEEEECCCcCCCCchhhCCHHHHHHHHhHHhHHHHHHHHHHHHHHHhc-
Confidence 9999963 2223333 379999999997543 1456778999999965544 455543
Q ss_pred CCceEEEEecceeecCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcHHH
Q 010075 153 KLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYV 232 (519)
Q Consensus 153 ~l~~~V~vSTa~v~~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~Y~ 232 (519)
+..++|++||....... +....|+
T Consensus 124 ~~g~iv~isS~~~~~~~--------------------------------------------------------~~~~~Y~ 147 (273)
T PRK06182 124 RSGRIINISSMGGKIYT--------------------------------------------------------PLGAWYH 147 (273)
T ss_pred CCCEEEEEcchhhcCCC--------------------------------------------------------CCccHhH
Confidence 56789999996532110 1234699
Q ss_pred HHHHHHHHHHHHh-----hcCCcEEEEecCccccCCCCCCCcccc-cc-ccc-HHHHHHhhcCCceeeccCCCceeeeee
Q 010075 233 FTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVE-DL-KTI-NTLFVASAQGNLRCLVGETKVIMDVIP 304 (519)
Q Consensus 233 ~sK~~aE~lv~~~-----~~~lp~~IvRPs~V~g~~~~p~~gw~~-~~-~~~-~~~i~~~~~g~~~~~~~~~~~~~d~vp 304 (519)
.||+..+.+.+.. ..+++++++|||.|.++.......... +. ... ......... . .........+..
T Consensus 148 ~sKaa~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~-~~~~~~~~~~~~ 222 (273)
T PRK06182 148 ATKFALEGFSDALRLEVAPFGIDVVVIEPGGIKTEWGDIAADHLLKTSGNGAYAEQAQAVAA----S-MRSTYGSGRLSD 222 (273)
T ss_pred HHHHHHHHHHHHHHHHhcccCCEEEEEecCCcccccchhhhhhhcccccccchHHHHHHHHH----H-HHHhhccccCCC
Confidence 9999999886543 358999999999998764310000000 00 000 000000000 0 001112335679
Q ss_pred HHHHHHHHHHHHHHhccCCCCCcEEEecCCCCCchhHHHHHHHHHHHHHHHH
Q 010075 305 VDMVVNAMIVAMVAHAKQPSDANIYHVGSSLRNPVTLGLQVANTVFHNFFKG 356 (519)
Q Consensus 305 VDdva~aii~a~~~~~~~~~~~~iyni~s~~~~~i~~~~~~~~~~~p~~~~~ 356 (519)
.+++|++++.++..... ...|+++.+.. .+.++..++|..+.+
T Consensus 223 ~~~vA~~i~~~~~~~~~----~~~~~~g~~~~-----~~~~~~~~~p~~~~~ 265 (273)
T PRK06182 223 PSVIADAISKAVTARRP----KTRYAVGFGAK-----PLIFLRRILPDRAFD 265 (273)
T ss_pred HHHHHHHHHHHHhCCCC----CceeecCcchH-----HHHHHHHHCcHHHHH
Confidence 99999999999864221 24677765422 344455566655443
|
|
| >COG1089 Gmd GDP-D-mannose dehydratase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=99.73 E-value=6e-17 Score=154.55 Aligned_cols=251 Identities=16% Similarity=0.132 Sum_probs=177.9
Q ss_pred CCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHH-HHHHHHhhhhhHHHHHhhhccccccccCCceEEE
Q 010075 12 NKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAAL-RFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFV 90 (519)
Q Consensus 12 ~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~-rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v 90 (519)
+|+.||||-||+-|++|++.||+.| ..|+.+.|..+..+... +|. +. | ..-..++..+
T Consensus 2 ~K~ALITGITGQDGsYLa~lLLekG---Y~VhGi~Rrss~~n~~ri~L~----~~----------~----~~~~~~l~l~ 60 (345)
T COG1089 2 GKVALITGITGQDGSYLAELLLEKG---YEVHGIKRRSSSFNTPRIHLY----ED----------P----HLNDPRLHLH 60 (345)
T ss_pred CceEEEecccCCchHHHHHHHHhcC---cEEEEEeeccccCCcccceec----cc----------c----ccCCceeEEE
Confidence 6899999999999999999999999 67899999854432211 221 00 0 1112458999
Q ss_pred eccCCCCCCCCChhhhHHHHhc--CccEEEEcCccCC----ccccHHHHHHHhHHHHHHHHHHHHhccC-CceEEEEecc
Q 010075 91 PGDISSEDLGLKDSNLKEELWN--ELDIMVNSAAITK----FDERYDVAFGINTLGVIHLVNFAKKCVK-LKVFVHVSTA 163 (519)
Q Consensus 91 ~gDl~~~~lgls~~~~~~~l~~--~vdiViH~Aa~v~----f~~~~~~~~~~Nv~gt~~ll~~a~~~~~-l~~~V~vSTa 163 (519)
.||++| ...+..+++ ++|-|+|+||... |++| ....+++..||.+||++.+.... -.+|...||+
T Consensus 61 ~gDLtD-------~~~l~r~l~~v~PdEIYNLaAQS~V~vSFe~P-~~T~~~~~iGtlrlLEaiR~~~~~~~rfYQAStS 132 (345)
T COG1089 61 YGDLTD-------SSNLLRILEEVQPDEIYNLAAQSHVGVSFEQP-EYTADVDAIGTLRLLEAIRILGEKKTRFYQASTS 132 (345)
T ss_pred eccccc-------hHHHHHHHHhcCchhheeccccccccccccCc-ceeeeechhHHHHHHHHHHHhCCcccEEEecccH
Confidence 999995 333335554 6999999999853 4443 44578899999999999998743 4689999999
Q ss_pred eeecCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcHHHHHHHHHHHHHH
Q 010075 164 YVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLMQ 243 (519)
Q Consensus 164 ~v~~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~Y~~sK~~aE~lv~ 243 (519)
..+|.. .|.+..|+.|+ .|.++|+.+|..|--+..
T Consensus 133 E~fG~v----~~~pq~E~TPF-----------------------------------------yPrSPYAvAKlYa~W~tv 167 (345)
T COG1089 133 ELYGLV----QEIPQKETTPF-----------------------------------------YPRSPYAVAKLYAYWITV 167 (345)
T ss_pred HhhcCc----ccCccccCCCC-----------------------------------------CCCCHHHHHHHHHHheee
Confidence 999853 34555544443 678999999999998877
Q ss_pred Hh--hcCCcEEEEecCccccCCCCCCCcccccccccHHHHHHhhcCCceee-ccCCCceeeeeeHHHHHHHHHHHHHHhc
Q 010075 244 QS--KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCL-VGETKVIMDVIPVDMVVNAMIVAMVAHA 320 (519)
Q Consensus 244 ~~--~~~lp~~IvRPs~V~g~~~~p~~gw~~~~~~~~~~i~~~~~g~~~~~-~~~~~~~~d~vpVDdva~aii~a~~~~~ 320 (519)
.| ..++-.+.=...+--+ |.-|-.---.-++.-+..+..|....+ .|+-+..+||-|+.|-+++|...+....
T Consensus 168 NYResYgl~AcnGILFNHES----P~Rge~FVTRKIt~ava~Ik~G~q~~l~lGNldAkRDWG~A~DYVe~mwlmLQq~~ 243 (345)
T COG1089 168 NYRESYGLFACNGILFNHES----PLRGETFVTRKITRAVARIKLGLQDKLYLGNLDAKRDWGHAKDYVEAMWLMLQQEE 243 (345)
T ss_pred ehHhhcCceeecceeecCCC----CCCccceehHHHHHHHHHHHccccceEEeccccccccccchHHHHHHHHHHHccCC
Confidence 66 4566555433333333 433322212344555667777876555 4889999999999999999999887433
Q ss_pred cCCCCCcEEEecCCCCCchhHHHHH
Q 010075 321 KQPSDANIYHVGSSLRNPVTLGLQV 345 (519)
Q Consensus 321 ~~~~~~~iyni~s~~~~~i~~~~~~ 345 (519)
.+.|.+++|...+++.++.+
T Consensus 244 -----PddyViATg~t~sVrefv~~ 263 (345)
T COG1089 244 -----PDDYVIATGETHSVREFVEL 263 (345)
T ss_pred -----CCceEEecCceeeHHHHHHH
Confidence 35799999999887654443
|
|
| >PRK12935 acetoacetyl-CoA reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.73 E-value=4.3e-16 Score=152.32 Aligned_cols=219 Identities=15% Similarity=0.108 Sum_probs=144.9
Q ss_pred cCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 010075 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (519)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (519)
+++++++||||||+||+++++.|++.| .+|+++.+.... ..+.+.+ .++. . ..++.+
T Consensus 4 ~~~~~~lItG~s~~iG~~la~~l~~~g---~~v~~~~~~~~~--~~~~~~~---------~l~~-~--------~~~~~~ 60 (247)
T PRK12935 4 LNGKVAIVTGGAKGIGKAITVALAQEG---AKVVINYNSSKE--AAENLVN---------ELGK-E--------GHDVYA 60 (247)
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHcC---CEEEEEcCCcHH--HHHHHHH---------HHHh-c--------CCeEEE
Confidence 468999999999999999999999988 456655443221 1112111 1111 0 246889
Q ss_pred EeccCCCCCCCCChhhhHHHHh-------cCccEEEEcCccCCc-------cccHHHHHHHhHHHHHHHHHHHHhc---c
Q 010075 90 VPGDISSEDLGLKDSNLKEELW-------NELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKC---V 152 (519)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~-------~~vdiViH~Aa~v~f-------~~~~~~~~~~Nv~gt~~ll~~a~~~---~ 152 (519)
+.+|++++ +....++ ..+|+|||+|+.... .+.++..+++|+.|+..+++.+... .
T Consensus 61 ~~~D~~~~-------~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~ 133 (247)
T PRK12935 61 VQADVSKV-------EDANRLVEEAVNHFGKVDILVNNAGITRDRTFKKLNREDWERVIDVNLSSVFNTTSAVLPYITEA 133 (247)
T ss_pred EECCCCCH-------HHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc
Confidence 99999963 2222332 358999999998542 1567778999999999999988642 2
Q ss_pred CCceEEEEecceeecCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcHHH
Q 010075 153 KLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYV 232 (519)
Q Consensus 153 ~l~~~V~vSTa~v~~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~Y~ 232 (519)
+..++|++||.+..... .....|+
T Consensus 134 ~~~~iv~~sS~~~~~~~--------------------------------------------------------~~~~~Y~ 157 (247)
T PRK12935 134 EEGRIISISSIIGQAGG--------------------------------------------------------FGQTNYS 157 (247)
T ss_pred CCcEEEEEcchhhcCCC--------------------------------------------------------CCCcchH
Confidence 34689999996543211 1235799
Q ss_pred HHHHHHHHHHHHh-----hcCCcEEEEecCccccCCCCCCCcccccccccHHHHHHhhcCCceeeccCCCceeeeeeHHH
Q 010075 233 FTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDM 307 (519)
Q Consensus 233 ~sK~~aE~lv~~~-----~~~lp~~IvRPs~V~g~~~~p~~gw~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~d~vpVDd 307 (519)
.||+..|.+++.. ..++++++++|+.|.++..... +.........+ ....++.+++|
T Consensus 158 ~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~v~t~~~~~~---------~~~~~~~~~~~---------~~~~~~~~~ed 219 (247)
T PRK12935 158 AAKAGMLGFTKSLALELAKTNVTVNAICPGFIDTEMVAEV---------PEEVRQKIVAK---------IPKKRFGQADE 219 (247)
T ss_pred HHHHHHHHHHHHHHHHHHHcCcEEEEEEeCCCcChhhhhc---------cHHHHHHHHHh---------CCCCCCcCHHH
Confidence 9999888877654 3489999999999876532111 11111111111 12346799999
Q ss_pred HHHHHHHHHHHhccCCCCCcEEEecCC
Q 010075 308 VVNAMIVAMVAHAKQPSDANIYHVGSS 334 (519)
Q Consensus 308 va~aii~a~~~~~~~~~~~~iyni~s~ 334 (519)
++++++.++... ....+++||++++
T Consensus 220 va~~~~~~~~~~--~~~~g~~~~i~~g 244 (247)
T PRK12935 220 IAKGVVYLCRDG--AYITGQQLNINGG 244 (247)
T ss_pred HHHHHHHHcCcc--cCccCCEEEeCCC
Confidence 999999988532 1123689999887
|
|
| >PRK07806 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.73 E-value=1.1e-16 Score=156.71 Aligned_cols=226 Identities=16% Similarity=0.127 Sum_probs=145.8
Q ss_pred cCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 010075 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (519)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (519)
+++++++|||||||||++++++|++.| .+|+++.|+... ..+++.++ ++.. ..++..
T Consensus 4 ~~~k~vlItGasggiG~~l~~~l~~~G---~~V~~~~r~~~~--~~~~~~~~---------l~~~---------~~~~~~ 60 (248)
T PRK07806 4 LPGKTALVTGSSRGIGADTAKILAGAG---AHVVVNYRQKAP--RANKVVAE---------IEAA---------GGRASA 60 (248)
T ss_pred CCCcEEEEECCCCcHHHHHHHHHHHCC---CEEEEEeCCchH--hHHHHHHH---------HHhc---------CCceEE
Confidence 468999999999999999999999988 578888886432 11222211 1110 245788
Q ss_pred EeccCCCCCCCCChhhhHHHHh-------cCccEEEEcCccCCc-cccHHHHHHHhHHHHHHHHHHHHhc-cCCceEEEE
Q 010075 90 VPGDISSEDLGLKDSNLKEELW-------NELDIMVNSAAITKF-DERYDVAFGINTLGVIHLVNFAKKC-VKLKVFVHV 160 (519)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~-------~~vdiViH~Aa~v~f-~~~~~~~~~~Nv~gt~~ll~~a~~~-~~l~~~V~v 160 (519)
+.+|+++++ + ...+. .++|+|||+|+.... ...+...+++|+.|+.++++.+.+. ....++|++
T Consensus 61 ~~~D~~~~~------~-~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~~~~~~~iv~i 133 (248)
T PRK07806 61 VGADLTDEE------S-VAALMDTAREEFGGLDALVLNASGGMESGMDEDYAMRLNRDAQRNLARAALPLMPAGSRVVFV 133 (248)
T ss_pred EEcCCCCHH------H-HHHHHHHHHHhCCCCcEEEECCCCCCCCCCCcceeeEeeeHHHHHHHHHHHhhccCCceEEEE
Confidence 999999642 2 22222 369999999986422 2234566889999999999999863 233589999
Q ss_pred ecceeecCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcHHHHHHHHHHH
Q 010075 161 STAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEM 240 (519)
Q Consensus 161 STa~v~~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~Y~~sK~~aE~ 240 (519)
||........ . ... .....|+.||+.+|.
T Consensus 134 sS~~~~~~~~---~-~~~-----------------------------------------------~~~~~Y~~sK~a~e~ 162 (248)
T PRK07806 134 TSHQAHFIPT---V-KTM-----------------------------------------------PEYEPVARSKRAGED 162 (248)
T ss_pred eCchhhcCcc---c-cCC-----------------------------------------------ccccHHHHHHHHHHH
Confidence 9954321100 0 000 113579999999999
Q ss_pred HHHHh-----hcCCcEEEEecCccccCCCCCCCcccccccccHHHHHHhhcCCceeeccCCCceeeeeeHHHHHHHHHHH
Q 010075 241 LMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMIVA 315 (519)
Q Consensus 241 lv~~~-----~~~lp~~IvRPs~V~g~~~~p~~gw~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~d~vpVDdva~aii~a 315 (519)
+++.+ ..++++++++|+.+-++....+ ... .....+. . ......++++++|+|++++.+
T Consensus 163 ~~~~l~~~~~~~~i~v~~v~pg~~~~~~~~~~---~~~--~~~~~~~----~-------~~~~~~~~~~~~dva~~~~~l 226 (248)
T PRK07806 163 ALRALRPELAEKGIGFVVVSGDMIEGTVTATL---LNR--LNPGAIE----A-------RREAAGKLYTVSEFAAEVARA 226 (248)
T ss_pred HHHHHHHHhhccCeEEEEeCCccccCchhhhh---hcc--CCHHHHH----H-------HHhhhcccCCHHHHHHHHHHH
Confidence 98875 3578999999887765432110 000 0000000 0 001124689999999999999
Q ss_pred HHHhccCCCCCcEEEecCCC
Q 010075 316 MVAHAKQPSDANIYHVGSSL 335 (519)
Q Consensus 316 ~~~~~~~~~~~~iyni~s~~ 335 (519)
+..... .+++|+++++.
T Consensus 227 ~~~~~~---~g~~~~i~~~~ 243 (248)
T PRK07806 227 VTAPVP---SGHIEYVGGAD 243 (248)
T ss_pred hhcccc---CccEEEecCcc
Confidence 973321 37899998874
|
|
| >PRK07523 gluconate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.73 E-value=1.9e-16 Score=155.86 Aligned_cols=223 Identities=14% Similarity=0.097 Sum_probs=148.7
Q ss_pred cCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 010075 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (519)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (519)
++||+|+||||+|+||++++++|++.| .+|+++.|+... .+.+. +.++.. ..++.+
T Consensus 8 ~~~k~vlItGa~g~iG~~ia~~l~~~G---~~V~~~~r~~~~---~~~~~---------~~i~~~---------~~~~~~ 63 (255)
T PRK07523 8 LTGRRALVTGSSQGIGYALAEGLAQAG---AEVILNGRDPAK---LAAAA---------ESLKGQ---------GLSAHA 63 (255)
T ss_pred CCCCEEEEECCcchHHHHHHHHHHHcC---CEEEEEeCCHHH---HHHHH---------HHHHhc---------CceEEE
Confidence 579999999999999999999999988 578888886421 11111 111110 135788
Q ss_pred EeccCCCCCCCCChhhhHHHHh-------cCccEEEEcCccCCc-------cccHHHHHHHhHHHHHHHHHHHHhc---c
Q 010075 90 VPGDISSEDLGLKDSNLKEELW-------NELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKC---V 152 (519)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~-------~~vdiViH~Aa~v~f-------~~~~~~~~~~Nv~gt~~ll~~a~~~---~ 152 (519)
+.+|++++ +..+.++ ..+|+|||+||.... .+.++..+.+|+.|+.++++.+.+. .
T Consensus 64 ~~~D~~~~-------~~~~~~~~~~~~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~ 136 (255)
T PRK07523 64 LAFDVTDH-------DAVRAAIDAFEAEIGPIDILVNNAGMQFRTPLEDFPADAFERLLRTNISSVFYVGQAVARHMIAR 136 (255)
T ss_pred EEccCCCH-------HHHHHHHHHHHHhcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHh
Confidence 99999963 2222333 358999999997532 2456778899999999999988642 2
Q ss_pred CCceEEEEecceeecCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcHHH
Q 010075 153 KLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYV 232 (519)
Q Consensus 153 ~l~~~V~vSTa~v~~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~Y~ 232 (519)
+.+++|++||....... .....|+
T Consensus 137 ~~g~iv~iss~~~~~~~--------------------------------------------------------~~~~~y~ 160 (255)
T PRK07523 137 GAGKIINIASVQSALAR--------------------------------------------------------PGIAPYT 160 (255)
T ss_pred CCeEEEEEccchhccCC--------------------------------------------------------CCCccHH
Confidence 45789999986432110 1235799
Q ss_pred HHHHHHHHHHHHh-----hcCCcEEEEecCccccCCCCCCCcccccccccHHHHHHhhcCCceeeccCCCceeeeeeHHH
Q 010075 233 FTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDM 307 (519)
Q Consensus 233 ~sK~~aE~lv~~~-----~~~lp~~IvRPs~V~g~~~~p~~gw~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~d~vpVDd 307 (519)
.+|...|.+++.+ ..++++.++||+.+.++...... . .......+... .....+..++|
T Consensus 161 ~sK~a~~~~~~~~a~e~~~~gi~v~~i~pg~~~t~~~~~~~---~----~~~~~~~~~~~---------~~~~~~~~~~d 224 (255)
T PRK07523 161 ATKGAVGNLTKGMATDWAKHGLQCNAIAPGYFDTPLNAALV---A----DPEFSAWLEKR---------TPAGRWGKVEE 224 (255)
T ss_pred HHHHHHHHHHHHHHHHhhHhCeEEEEEEECcccCchhhhhc---c----CHHHHHHHHhc---------CCCCCCcCHHH
Confidence 9999999988765 45799999999999887542110 0 01111111111 11234567999
Q ss_pred HHHHHHHHHHHhccCCCCCcEEEecCCCC
Q 010075 308 VVNAMIVAMVAHAKQPSDANIYHVGSSLR 336 (519)
Q Consensus 308 va~aii~a~~~~~~~~~~~~iyni~s~~~ 336 (519)
+|++++.++..... .-.++++++.+|..
T Consensus 225 va~~~~~l~~~~~~-~~~G~~i~~~gg~~ 252 (255)
T PRK07523 225 LVGACVFLASDASS-FVNGHVLYVDGGIT 252 (255)
T ss_pred HHHHHHHHcCchhc-CccCcEEEECCCee
Confidence 99999988864222 12367899988744
|
|
| >PRK08263 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.73 E-value=1.5e-16 Score=158.55 Aligned_cols=208 Identities=15% Similarity=0.156 Sum_probs=137.6
Q ss_pred CCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEE
Q 010075 11 ENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFV 90 (519)
Q Consensus 11 ~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v 90 (519)
.+|+||||||||+||++++++|++.| .+|+++.|+... .+.+. +. ...++..+
T Consensus 2 ~~k~vlItGasg~iG~~~a~~l~~~g---~~V~~~~r~~~~---~~~~~-------------~~--------~~~~~~~~ 54 (275)
T PRK08263 2 MEKVWFITGASRGFGRAWTEAALERG---DRVVATARDTAT---LADLA-------------EK--------YGDRLLPL 54 (275)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCC---CEEEEEECCHHH---HHHHH-------------Hh--------ccCCeeEE
Confidence 46899999999999999999999988 678999987432 11111 11 12467888
Q ss_pred eccCCCCCCCCChhhhHHHH-------hcCccEEEEcCccCCc-------cccHHHHHHHhHHHHHHHHHHH----Hhcc
Q 010075 91 PGDISSEDLGLKDSNLKEEL-------WNELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFA----KKCV 152 (519)
Q Consensus 91 ~gDl~~~~lgls~~~~~~~l-------~~~vdiViH~Aa~v~f-------~~~~~~~~~~Nv~gt~~ll~~a----~~~~ 152 (519)
.+|++++. + ...+ ...+|+|||+||.... .+.++..+++|+.++..+++.+ ++ .
T Consensus 55 ~~D~~~~~------~-~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-~ 126 (275)
T PRK08263 55 ALDVTDRA------A-VFAAVETAVEHFGRLDIVVNNAGYGLFGMIEEVTESEARAQIDTNFFGALWVTQAVLPYLRE-Q 126 (275)
T ss_pred EccCCCHH------H-HHHHHHHHHHHcCCCCEEEECCCCccccccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHh-c
Confidence 99999632 2 2222 2468999999998643 2467888999999998887775 33 2
Q ss_pred CCceEEEEecceeecCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcHHH
Q 010075 153 KLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYV 232 (519)
Q Consensus 153 ~l~~~V~vSTa~v~~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~Y~ 232 (519)
+.+++|++||...+... .....|+
T Consensus 127 ~~~~iv~vsS~~~~~~~--------------------------------------------------------~~~~~Y~ 150 (275)
T PRK08263 127 RSGHIIQISSIGGISAF--------------------------------------------------------PMSGIYH 150 (275)
T ss_pred CCCEEEEEcChhhcCCC--------------------------------------------------------CCccHHH
Confidence 56799999997655421 1135699
Q ss_pred HHHHHHHHHHHHh-----hcCCcEEEEecCccccCCCCCCCcccccccccHHHHHHhhcCCceeeccCCCceeee-eeHH
Q 010075 233 FTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDV-IPVD 306 (519)
Q Consensus 233 ~sK~~aE~lv~~~-----~~~lp~~IvRPs~V~g~~~~p~~gw~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~d~-vpVD 306 (519)
.||+..+.+.+.. ..+++++++|||.+.++...+.............+..... .......+ +.++
T Consensus 151 ~sKaa~~~~~~~la~e~~~~gi~v~~v~Pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~p~ 221 (275)
T PRK08263 151 ASKWALEGMSEALAQEVAEFGIKVTLVEPGGYSTDWAGTSAKRATPLDAYDTLREELA---------EQWSERSVDGDPE 221 (275)
T ss_pred HHHHHHHHHHHHHHHHhhhhCcEEEEEecCCccCCccccccccCCCchhhhhHHHHHH---------HHHHhccCCCCHH
Confidence 9999988887654 3589999999999877654211111010000011111111 11112234 7899
Q ss_pred HHHHHHHHHHHH
Q 010075 307 MVVNAMIVAMVA 318 (519)
Q Consensus 307 dva~aii~a~~~ 318 (519)
|++++++.++..
T Consensus 222 dva~~~~~l~~~ 233 (275)
T PRK08263 222 AAAEALLKLVDA 233 (275)
T ss_pred HHHHHHHHHHcC
Confidence 999999999874
|
|
| >PRK12823 benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.73 E-value=2.6e-16 Score=155.19 Aligned_cols=232 Identities=13% Similarity=0.113 Sum_probs=143.2
Q ss_pred hhcCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCce
Q 010075 8 EFLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKI 87 (519)
Q Consensus 8 ~~~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v 87 (519)
..+++|+++||||+|+||+++++.|++.| .+|+++.|+... +.+.++ +.. ...++
T Consensus 4 ~~~~~k~vlVtGas~gIG~~la~~l~~~G---~~v~~~~r~~~~----~~~~~~---------~~~---------~~~~~ 58 (260)
T PRK12823 4 QRFAGKVVVVTGAAQGIGRGVALRAAAEG---ARVVLVDRSELV----HEVAAE---------LRA---------AGGEA 58 (260)
T ss_pred cccCCCEEEEeCCCchHHHHHHHHHHHCC---CEEEEEeCchHH----HHHHHH---------HHh---------cCCeE
Confidence 34788999999999999999999999988 577888886321 111111 111 02467
Q ss_pred EEEeccCCCCCCCCChhhhHHHH---hcCccEEEEcCccCC----c----cccHHHHHHHhHHHHHHHHHHHHh-c--cC
Q 010075 88 TFVPGDISSEDLGLKDSNLKEEL---WNELDIMVNSAAITK----F----DERYDVAFGINTLGVIHLVNFAKK-C--VK 153 (519)
Q Consensus 88 ~~v~gDl~~~~lgls~~~~~~~l---~~~vdiViH~Aa~v~----f----~~~~~~~~~~Nv~gt~~ll~~a~~-~--~~ 153 (519)
.++.+|++++.. .....+.+ ..++|++||+|+... + .+.++..+++|+.|+..+++.+.+ + .+
T Consensus 59 ~~~~~D~~~~~~---~~~~~~~~~~~~~~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~ 135 (260)
T PRK12823 59 LALTADLETYAG---AQAAMAAAVEAFGRIDVLINNVGGTIWAKPFEEYEEEQIEAEIRRSLFPTLWCCRAVLPHMLAQG 135 (260)
T ss_pred EEEEEeCCCHHH---HHHHHHHHHHHcCCCeEEEECCccccCCCChhhCChHHHHHHHHHHhHHHHHHHHHHHHHHHhcC
Confidence 889999996321 01111111 236899999998532 1 245677789999988766655432 1 24
Q ss_pred CceEEEEecceeecCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcHHHH
Q 010075 154 LKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVF 233 (519)
Q Consensus 154 l~~~V~vSTa~v~~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~Y~~ 233 (519)
..++|++||...++. ....|+.
T Consensus 136 ~g~iv~~sS~~~~~~----------------------------------------------------------~~~~Y~~ 157 (260)
T PRK12823 136 GGAIVNVSSIATRGI----------------------------------------------------------NRVPYSA 157 (260)
T ss_pred CCeEEEEcCccccCC----------------------------------------------------------CCCccHH
Confidence 568999999765421 1235999
Q ss_pred HHHHHHHHHHHh-----hcCCcEEEEecCccccCCCCCCCc---cccc-ccccHHHHHHhhcCCceeeccCCCceeeeee
Q 010075 234 TKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPG---WVED-LKTINTLFVASAQGNLRCLVGETKVIMDVIP 304 (519)
Q Consensus 234 sK~~aE~lv~~~-----~~~lp~~IvRPs~V~g~~~~p~~g---w~~~-~~~~~~~i~~~~~g~~~~~~~~~~~~~d~vp 304 (519)
||+..|.+++.+ ..++++.+++||.|+++...-... +.+. ......+......+.. ..-+..
T Consensus 158 sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~ 228 (260)
T PRK12823 158 AKGGVNALTASLAFEYAEHGIRVNAVAPGGTEAPPRRVPRNAAPQSEQEKAWYQQIVDQTLDSSL---------MKRYGT 228 (260)
T ss_pred HHHHHHHHHHHHHHHhcccCcEEEEEecCccCCcchhhHHhhccccccccccHHHHHHHHhccCC---------cccCCC
Confidence 999999988765 347999999999999874210000 0000 0111112222222111 112346
Q ss_pred HHHHHHHHHHHHHHhccCCCCCcEEEecCCC
Q 010075 305 VDMVVNAMIVAMVAHAKQPSDANIYHVGSSL 335 (519)
Q Consensus 305 VDdva~aii~a~~~~~~~~~~~~iyni~s~~ 335 (519)
++|+|++++.++.... ..-.+.++++.+|.
T Consensus 229 ~~dva~~~~~l~s~~~-~~~~g~~~~v~gg~ 258 (260)
T PRK12823 229 IDEQVAAILFLASDEA-SYITGTVLPVGGGD 258 (260)
T ss_pred HHHHHHHHHHHcCccc-ccccCcEEeecCCC
Confidence 8999999988875321 11236789997763
|
|
| >PRK12829 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.73 E-value=7.8e-17 Score=159.02 Aligned_cols=236 Identities=13% Similarity=0.096 Sum_probs=147.6
Q ss_pred hhcCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCce
Q 010075 8 EFLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKI 87 (519)
Q Consensus 8 ~~~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v 87 (519)
..++++++|||||+|+||+++++.|++.| .+|+++.|+... .+.+. ++.+ ..++
T Consensus 7 ~~~~~~~vlItGa~g~iG~~~a~~L~~~g---~~V~~~~r~~~~---~~~~~-------------~~~~-------~~~~ 60 (264)
T PRK12829 7 KPLDGLRVLVTGGASGIGRAIAEAFAEAG---ARVHVCDVSEAA---LAATA-------------ARLP-------GAKV 60 (264)
T ss_pred hccCCCEEEEeCCCCcHHHHHHHHHHHCC---CEEEEEeCCHHH---HHHHH-------------HHHh-------cCce
Confidence 44788999999999999999999999988 578999986432 12221 1111 1257
Q ss_pred EEEeccCCCCCCCCChhhhHHHHhcCccEEEEcCccCCc--------cccHHHHHHHhHHHHHHHHHHHHhc---cCC-c
Q 010075 88 TFVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF--------DERYDVAFGINTLGVIHLVNFAKKC---VKL-K 155 (519)
Q Consensus 88 ~~v~gDl~~~~lgls~~~~~~~l~~~vdiViH~Aa~v~f--------~~~~~~~~~~Nv~gt~~ll~~a~~~---~~l-~ 155 (519)
.++.+|++++..-....+.......++|+|||+||.... .+.+...+++|+.|+.++++.+.+. .+. +
T Consensus 61 ~~~~~D~~~~~~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ 140 (264)
T PRK12829 61 TATVADVADPAQVERVFDTAVERFGGLDVLVNNAGIAGPTGGIDEITPEQWEQTLAVNLNGQFYFARAAVPLLKASGHGG 140 (264)
T ss_pred EEEEccCCCHHHHHHHHHHHHHHhCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCe
Confidence 889999996321000000111122479999999997621 2456788999999999998877431 233 5
Q ss_pred eEEEEecceeecCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcHHHHHH
Q 010075 156 VFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTK 235 (519)
Q Consensus 156 ~~V~vSTa~v~~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~Y~~sK 235 (519)
.++++||....... +....|+.+|
T Consensus 141 ~vv~~ss~~~~~~~--------------------------------------------------------~~~~~y~~~K 164 (264)
T PRK12829 141 VIIALSSVAGRLGY--------------------------------------------------------PGRTPYAASK 164 (264)
T ss_pred EEEEecccccccCC--------------------------------------------------------CCCchhHHHH
Confidence 68888775432110 1124699999
Q ss_pred HHHHHHHHHh-----hcCCcEEEEecCccccCCCCCCCcc---cccccccHHHHHHhhcCCceeeccCCCceeeeeeHHH
Q 010075 236 TMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGW---VEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDM 307 (519)
Q Consensus 236 ~~aE~lv~~~-----~~~lp~~IvRPs~V~g~~~~p~~gw---~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~d~vpVDd 307 (519)
+..|.+++.. ..+++++++|||.++++..+..... ... ........... .......+++++|
T Consensus 165 ~a~~~~~~~l~~~~~~~~i~~~~l~pg~v~~~~~~~~~~~~~~~~~-~~~~~~~~~~~---------~~~~~~~~~~~~d 234 (264)
T PRK12829 165 WAVVGLVKSLAIELGPLGIRVNAILPGIVRGPRMRRVIEARAQQLG-IGLDEMEQEYL---------EKISLGRMVEPED 234 (264)
T ss_pred HHHHHHHHHHHHHHhhcCeEEEEEecCCcCChHHHHHhhhhhhccC-CChhHHHHHHH---------hcCCCCCCCCHHH
Confidence 9999888765 2479999999999998754321100 000 00001000000 0112235899999
Q ss_pred HHHHHHHHHHHhccCCCCCcEEEecCCCC
Q 010075 308 VVNAMIVAMVAHAKQPSDANIYHVGSSLR 336 (519)
Q Consensus 308 va~aii~a~~~~~~~~~~~~iyni~s~~~ 336 (519)
+|+++..++.... ....+++|++++|..
T Consensus 235 ~a~~~~~l~~~~~-~~~~g~~~~i~~g~~ 262 (264)
T PRK12829 235 IAATALFLASPAA-RYITGQAISVDGNVE 262 (264)
T ss_pred HHHHHHHHcCccc-cCccCcEEEeCCCcc
Confidence 9999988774321 222467999988754
|
|
| >KOG2865 consensus NADH:ubiquinone oxidoreductase, NDUFA9/39kDa subunit [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=99.72 E-value=6.9e-17 Score=153.82 Aligned_cols=225 Identities=20% Similarity=0.255 Sum_probs=161.4
Q ss_pred cCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 010075 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (519)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (519)
++|-.+-|.|||||+|+.++.+|.+.| .+|++--|........-++- + ....+.+
T Consensus 59 ~sGiVaTVFGAtGFlGryvvnklak~G---SQviiPyR~d~~~~r~lkvm----------------G------dLGQvl~ 113 (391)
T KOG2865|consen 59 VSGIVATVFGATGFLGRYVVNKLAKMG---SQVIIPYRGDEYDPRHLKVM----------------G------DLGQVLF 113 (391)
T ss_pred ccceEEEEecccccccHHHHHHHhhcC---CeEEEeccCCccchhheeec----------------c------cccceee
Confidence 456678889999999999999999999 78899888865442221111 0 0256777
Q ss_pred EeccCCCCCCCCChhhhHHHHhcCccEEEEcCccCCccccHHHHHHHhHHHHHHHHHHHHhccCCceEEEEecceeecCc
Q 010075 90 VPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKFDERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAYVAGER 169 (519)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~~~vdiViH~Aa~v~f~~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V~vSTa~v~~~~ 169 (519)
..-|+. +++.+....+.-++|||+.|.- +....-...++|+.+.++|.+.|+++ ++.+|||+|+...+-
T Consensus 114 ~~fd~~-------DedSIr~vvk~sNVVINLIGrd-~eTknf~f~Dvn~~~aerlAricke~-GVerfIhvS~Lganv-- 182 (391)
T KOG2865|consen 114 MKFDLR-------DEDSIRAVVKHSNVVINLIGRD-YETKNFSFEDVNVHIAERLARICKEA-GVERFIHVSCLGANV-- 182 (391)
T ss_pred eccCCC-------CHHHHHHHHHhCcEEEEeeccc-cccCCcccccccchHHHHHHHHHHhh-Chhheeehhhccccc--
Confidence 888888 6666778888999999999863 22111233678999999999999997 999999999876331
Q ss_pred CCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcHHHHHHHHHHHHHHHhhcCC
Q 010075 170 TGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLMQQSKENL 249 (519)
Q Consensus 170 ~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~Y~~sK~~aE~lv~~~~~~l 249 (519)
..++-|-.+|+++|..++++.++
T Consensus 183 --------------------------------------------------------~s~Sr~LrsK~~gE~aVrdafPe- 205 (391)
T KOG2865|consen 183 --------------------------------------------------------KSPSRMLRSKAAGEEAVRDAFPE- 205 (391)
T ss_pred --------------------------------------------------------cChHHHHHhhhhhHHHHHhhCCc-
Confidence 22456788999999999987443
Q ss_pred cEEEEecCccccCCCCCCCcccccccccHHHHHHhhcCCceeeccCC-CceeeeeeHHHHHHHHHHHHHHhccCCCCCcE
Q 010075 250 SLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGET-KVIMDVIPVDMVVNAMIVAMVAHAKQPSDANI 328 (519)
Q Consensus 250 p~~IvRPs~V~g~~~~p~~gw~~~~~~~~~~i~~~~~g~~~~~~~~~-~~~~d~vpVDdva~aii~a~~~~~~~~~~~~i 328 (519)
.+|+||+.|||..+.-+.-| ..+..- -|.+ .+.+.| +..-..|+|-|||.+|+.|+..+. ..+++
T Consensus 206 -AtIirPa~iyG~eDrfln~y--------a~~~rk-~~~~-pL~~~GekT~K~PVyV~DVaa~IvnAvkDp~---s~Gkt 271 (391)
T KOG2865|consen 206 -ATIIRPADIYGTEDRFLNYY--------ASFWRK-FGFL-PLIGKGEKTVKQPVYVVDVAAAIVNAVKDPD---SMGKT 271 (391)
T ss_pred -ceeechhhhcccchhHHHHH--------HHHHHh-cCce-eeecCCcceeeccEEEehHHHHHHHhccCcc---ccCce
Confidence 89999999999865211111 111111 2222 233444 567788999999999999987542 24789
Q ss_pred EEecCCCCCchhH
Q 010075 329 YHVGSSLRNPVTL 341 (519)
Q Consensus 329 yni~s~~~~~i~~ 341 (519)
|..++++...++.
T Consensus 272 ye~vGP~~yql~e 284 (391)
T KOG2865|consen 272 YEFVGPDRYQLSE 284 (391)
T ss_pred eeecCCchhhHHH
Confidence 9999986655444
|
|
| >PRK12745 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.72 E-value=2e-16 Score=155.41 Aligned_cols=228 Identities=18% Similarity=0.187 Sum_probs=146.4
Q ss_pred CCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEEe
Q 010075 12 NKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVP 91 (519)
Q Consensus 12 ~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v~ 91 (519)
.|+|+||||||+||+++++.|++.| .+|+++.|..... .+... +.++. ...++.++.
T Consensus 2 ~k~vlItG~sg~iG~~la~~L~~~g---~~vi~~~r~~~~~--~~~~~---------~~~~~---------~~~~~~~~~ 58 (256)
T PRK12745 2 RPVALVTGGRRGIGLGIARALAAAG---FDLAINDRPDDEE--LAATQ---------QELRA---------LGVEVIFFP 58 (256)
T ss_pred CcEEEEeCCCchHHHHHHHHHHHCC---CEEEEEecCchhH--HHHHH---------HHHHh---------cCCceEEEE
Confidence 4789999999999999999999988 5778888764321 11111 01111 024688999
Q ss_pred ccCCCCCCCCChhhhHHHHhcCccEEEEcCccCCc---------cccHHHHHHHhHHHHHHHHHHHHhc----cC-----
Q 010075 92 GDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF---------DERYDVAFGINTLGVIHLVNFAKKC----VK----- 153 (519)
Q Consensus 92 gDl~~~~lgls~~~~~~~l~~~vdiViH~Aa~v~f---------~~~~~~~~~~Nv~gt~~ll~~a~~~----~~----- 153 (519)
+|++++.--....+........+|+|||+||.... .+.++..+++|+.|+.++++.+.+. ++
T Consensus 59 ~D~~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~ 138 (256)
T PRK12745 59 ADVADLSAHEAMLDAAQAAWGRIDCLVNNAGVGVKVRGDLLDLTPESFDRVLAINLRGPFFLTQAVAKRMLAQPEPEELP 138 (256)
T ss_pred ecCCCHHHHHHHHHHHHHhcCCCCEEEECCccCCCCCCChhhCCHHHHHHHHHhcchHHHHHHHHHHHHHHhccCcCCCC
Confidence 99996421000000111112468999999987431 2456778999999999998887542 11
Q ss_pred CceEEEEecceeecCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcHHHH
Q 010075 154 LKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVF 233 (519)
Q Consensus 154 l~~~V~vSTa~v~~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~Y~~ 233 (519)
..+||++||....... .....|+.
T Consensus 139 ~~~iv~~sS~~~~~~~--------------------------------------------------------~~~~~Y~~ 162 (256)
T PRK12745 139 HRSIVFVSSVNAIMVS--------------------------------------------------------PNRGEYCI 162 (256)
T ss_pred CcEEEEECChhhccCC--------------------------------------------------------CCCcccHH
Confidence 5679999997654321 12356999
Q ss_pred HHHHHHHHHHHh-----hcCCcEEEEecCccccCCCCCCCcccccccccHHHHHHhhcCCceeeccCCCceeeeeeHHHH
Q 010075 234 TKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMV 308 (519)
Q Consensus 234 sK~~aE~lv~~~-----~~~lp~~IvRPs~V~g~~~~p~~gw~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~d~vpVDdv 308 (519)
+|+..|.+++.+ ..+++++++|||.+.++...+. .+. .......+. ....++.+++|+
T Consensus 163 sK~a~~~~~~~l~~~~~~~gi~v~~i~pg~v~t~~~~~~---~~~------~~~~~~~~~--------~~~~~~~~~~d~ 225 (256)
T PRK12745 163 SKAGLSMAAQLFAARLAEEGIGVYEVRPGLIKTDMTAPV---TAK------YDALIAKGL--------VPMPRWGEPEDV 225 (256)
T ss_pred HHHHHHHHHHHHHHHHHHhCCEEEEEecCCCcCcccccc---chh------HHhhhhhcC--------CCcCCCcCHHHH
Confidence 999999988866 3579999999999988654221 111 111111111 112356789999
Q ss_pred HHHHHHHHHHhccCCCCCcEEEecCCCC
Q 010075 309 VNAMIVAMVAHAKQPSDANIYHVGSSLR 336 (519)
Q Consensus 309 a~aii~a~~~~~~~~~~~~iyni~s~~~ 336 (519)
++++..++... .....+.+|++.++..
T Consensus 226 a~~i~~l~~~~-~~~~~G~~~~i~gg~~ 252 (256)
T PRK12745 226 ARAVAALASGD-LPYSTGQAIHVDGGLS 252 (256)
T ss_pred HHHHHHHhCCc-ccccCCCEEEECCCee
Confidence 99988877532 1122468999988743
|
|
| >PRK06180 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.72 E-value=3.3e-16 Score=156.21 Aligned_cols=164 Identities=13% Similarity=0.137 Sum_probs=119.8
Q ss_pred CCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEE
Q 010075 11 ENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFV 90 (519)
Q Consensus 11 ~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v 90 (519)
.+++|+||||||+||+++++.|++.| .+|+++.|+... .+.+. +. ...++..+
T Consensus 3 ~~~~vlVtGasggiG~~la~~l~~~G---~~V~~~~r~~~~---~~~l~-------------~~--------~~~~~~~~ 55 (277)
T PRK06180 3 SMKTWLITGVSSGFGRALAQAALAAG---HRVVGTVRSEAA---RADFE-------------AL--------HPDRALAR 55 (277)
T ss_pred CCCEEEEecCCChHHHHHHHHHHhCc---CEEEEEeCCHHH---HHHHH-------------hh--------cCCCeeEE
Confidence 46899999999999999999999988 678999987432 11221 11 12467889
Q ss_pred eccCCCCCCCCChhhhHHHHh-------cCccEEEEcCccCCcc-------ccHHHHHHHhHHHHHHHHHHHHh---ccC
Q 010075 91 PGDISSEDLGLKDSNLKEELW-------NELDIMVNSAAITKFD-------ERYDVAFGINTLGVIHLVNFAKK---CVK 153 (519)
Q Consensus 91 ~gDl~~~~lgls~~~~~~~l~-------~~vdiViH~Aa~v~f~-------~~~~~~~~~Nv~gt~~ll~~a~~---~~~ 153 (519)
.+|++++ +....++ .++|+|||+||..... +.++..+++|+.|+.++++.+.. ..+
T Consensus 56 ~~D~~d~-------~~~~~~~~~~~~~~~~~d~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~ 128 (277)
T PRK06180 56 LLDVTDF-------DAIDAVVADAEATFGPIDVLVNNAGYGHEGAIEESPLAEMRRQFEVNVFGAVAMTKAVLPGMRARR 128 (277)
T ss_pred EccCCCH-------HHHHHHHHHHHHHhCCCCEEEECCCccCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhccC
Confidence 9999963 2222332 3689999999986431 34667799999999999988643 124
Q ss_pred CceEEEEecceeecCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcHHHH
Q 010075 154 LKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVF 233 (519)
Q Consensus 154 l~~~V~vSTa~v~~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~Y~~ 233 (519)
.+++|++||....... +....|+.
T Consensus 129 ~~~iv~iSS~~~~~~~--------------------------------------------------------~~~~~Y~~ 152 (277)
T PRK06180 129 RGHIVNITSMGGLITM--------------------------------------------------------PGIGYYCG 152 (277)
T ss_pred CCEEEEEecccccCCC--------------------------------------------------------CCcchhHH
Confidence 5789999997543211 12357999
Q ss_pred HHHHHHHHHHHh-----hcCCcEEEEecCccccCCC
Q 010075 234 TKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYK 264 (519)
Q Consensus 234 sK~~aE~lv~~~-----~~~lp~~IvRPs~V~g~~~ 264 (519)
+|+..|.+++.. ..+++++++|||.|.++..
T Consensus 153 sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~ 188 (277)
T PRK06180 153 SKFALEGISESLAKEVAPFGIHVTAVEPGSFRTDWA 188 (277)
T ss_pred HHHHHHHHHHHHHHHhhhhCcEEEEEecCCcccCcc
Confidence 999999888765 2489999999999987653
|
|
| >TIGR03649 ergot_EASG ergot alkaloid biosynthesis protein, AFUA_2G17970 family | Back alignment and domain information |
|---|
Probab=99.72 E-value=4.6e-16 Score=155.78 Aligned_cols=205 Identities=15% Similarity=0.173 Sum_probs=136.3
Q ss_pred EEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEEecc
Q 010075 14 TILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVPGD 93 (519)
Q Consensus 14 ~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v~gD 93 (519)
+|+||||||++|++++++|++.| .+|.+++|+..... ...++.+.+|
T Consensus 1 ~ilVtGatG~iG~~vv~~L~~~g---~~V~~~~R~~~~~~------------------------------~~~~~~~~~d 47 (285)
T TIGR03649 1 TILLTGGTGKTASRIARLLQAAS---VPFLVASRSSSSSA------------------------------GPNEKHVKFD 47 (285)
T ss_pred CEEEEcCCChHHHHHHHHHHhCC---CcEEEEeCCCcccc------------------------------CCCCcccccc
Confidence 48999999999999999999988 57899999864321 1345677899
Q ss_pred CCCCCCCCChhhhHHHHh------cC-ccEEEEcCccCCccccHHHHHHHhHHHHHHHHHHHHhccCCceEEEEecceee
Q 010075 94 ISSEDLGLKDSNLKEELW------NE-LDIMVNSAAITKFDERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAYVA 166 (519)
Q Consensus 94 l~~~~lgls~~~~~~~l~------~~-vdiViH~Aa~v~f~~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V~vSTa~v~ 166 (519)
+.+ .+.....+ .+ +|.|+|+++... +. ...+.+++++|++. ++++||++||..+.
T Consensus 48 ~~d-------~~~l~~a~~~~~~~~g~~d~v~~~~~~~~--~~--------~~~~~~~i~aa~~~-gv~~~V~~Ss~~~~ 109 (285)
T TIGR03649 48 WLD-------EDTWDNPFSSDDGMEPEISAVYLVAPPIP--DL--------APPMIKFIDFARSK-GVRRFVLLSASIIE 109 (285)
T ss_pred CCC-------HHHHHHHHhcccCcCCceeEEEEeCCCCC--Ch--------hHHHHHHHHHHHHc-CCCEEEEeeccccC
Confidence 985 33333554 46 999999987532 11 23456889999987 89999999986543
Q ss_pred cCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcHHHHHHHHHHHHHHHhh
Q 010075 167 GERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLMQQSK 246 (519)
Q Consensus 167 ~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~Y~~sK~~aE~lv~~~~ 246 (519)
... + .+...|..+.+.
T Consensus 110 ~~~----------------------------------------------------------~-----~~~~~~~~l~~~- 125 (285)
T TIGR03649 110 KGG----------------------------------------------------------P-----AMGQVHAHLDSL- 125 (285)
T ss_pred CCC----------------------------------------------------------c-----hHHHHHHHHHhc-
Confidence 210 0 111233444331
Q ss_pred cCCcEEEEecCccccCCCCCCCcccccccccHHHHHHhhcCCceeeccCCCceeeeeeHHHHHHHHHHHHHHhccCCCCC
Q 010075 247 ENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMIVAMVAHAKQPSDA 326 (519)
Q Consensus 247 ~~lp~~IvRPs~V~g~~~~p~~gw~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~d~vpVDdva~aii~a~~~~~~~~~~~ 326 (519)
.+++++++||+.++.....+. +... + ...|.+ +.+.++...++|+++|+|+++..++..... .+
T Consensus 126 ~gi~~tilRp~~f~~~~~~~~--~~~~-------~--~~~~~~--~~~~g~~~~~~v~~~Dva~~~~~~l~~~~~---~~ 189 (285)
T TIGR03649 126 GGVEYTVLRPTWFMENFSEEF--HVEA-------I--RKENKI--YSATGDGKIPFVSADDIARVAYRALTDKVA---PN 189 (285)
T ss_pred cCCCEEEEeccHHhhhhcccc--cccc-------c--ccCCeE--EecCCCCccCcccHHHHHHHHHHHhcCCCc---CC
Confidence 489999999998886432110 0000 0 011222 234567889999999999999998864321 25
Q ss_pred cEEEecCCCCCchhHHHHHHHHH
Q 010075 327 NIYHVGSSLRNPVTLGLQVANTV 349 (519)
Q Consensus 327 ~iyni~s~~~~~i~~~~~~~~~~ 349 (519)
++|+++++...+...+...+...
T Consensus 190 ~~~~l~g~~~~s~~eia~~l~~~ 212 (285)
T TIGR03649 190 TDYVVLGPELLTYDDVAEILSRV 212 (285)
T ss_pred CeEEeeCCccCCHHHHHHHHHHH
Confidence 78999998776666665555443
|
This family consists of fungal proteins of unknown function associated with secondary metabolite biosynthesis, such as of the ergot alkaloids such as ergovaline. Nomenclature differs because gene order differs - this is EasG in Neotyphodium lolii but is designated ergot alkaloid biosynthetic protein A in several other fungi. |
| >PRK08063 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.72 E-value=3.6e-16 Score=153.07 Aligned_cols=222 Identities=17% Similarity=0.177 Sum_probs=144.9
Q ss_pred cCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEE-EEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceE
Q 010075 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYL-FVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKIT 88 (519)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~-LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~ 88 (519)
+.+++++||||||+||++++++|++.| .+|++ +.|+... .+.+.++ ++. ...++.
T Consensus 2 ~~~~~vlItGa~g~iG~~~a~~l~~~g---~~v~~~~~r~~~~---~~~~~~~---------~~~---------~~~~~~ 57 (250)
T PRK08063 2 FSGKVALVTGSSRGIGKAIALRLAEEG---YDIAVNYARSRKA---AEETAEE---------IEA---------LGRKAL 57 (250)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCC---CEEEEEcCCCHHH---HHHHHHH---------HHh---------cCCeEE
Confidence 467899999999999999999999988 45554 4565321 1111111 111 124688
Q ss_pred EEeccCCCCCCCCChhhhHHHHh-------cCccEEEEcCccCCc-------cccHHHHHHHhHHHHHHHHHHHHhc---
Q 010075 89 FVPGDISSEDLGLKDSNLKEELW-------NELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKC--- 151 (519)
Q Consensus 89 ~v~gDl~~~~lgls~~~~~~~l~-------~~vdiViH~Aa~v~f-------~~~~~~~~~~Nv~gt~~ll~~a~~~--- 151 (519)
++.+|++++ +....++ ..+|+|||+|+.... .+.+...+.+|+.|+..+++.+.+.
T Consensus 58 ~~~~D~~~~-------~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~ 130 (250)
T PRK08063 58 AVKANVGDV-------EKIKEMFAQIDEEFGRLDVFVNNAASGVLRPAMELEESHWDWTMNINAKALLFCAQEAAKLMEK 130 (250)
T ss_pred EEEcCCCCH-------HHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHh
Confidence 899999963 2222332 368999999986532 1345567889999999998887642
Q ss_pred cCCceEEEEecceeecCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcHH
Q 010075 152 VKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTY 231 (519)
Q Consensus 152 ~~l~~~V~vSTa~v~~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~Y 231 (519)
.+.++||++||....... +....|
T Consensus 131 ~~~g~iv~~sS~~~~~~~--------------------------------------------------------~~~~~y 154 (250)
T PRK08063 131 VGGGKIISLSSLGSIRYL--------------------------------------------------------ENYTTV 154 (250)
T ss_pred cCCeEEEEEcchhhccCC--------------------------------------------------------CCccHH
Confidence 245699999996443211 123579
Q ss_pred HHHHHHHHHHHHHh-----hcCCcEEEEecCccccCCCCCCCcccccccccHHHHHHhhcCCceeeccCCCceeeeeeHH
Q 010075 232 VFTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVD 306 (519)
Q Consensus 232 ~~sK~~aE~lv~~~-----~~~lp~~IvRPs~V~g~~~~p~~gw~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~d~vpVD 306 (519)
+.||+..|.+++.. ..++++++++|+.+.++.....+++ ..+..... ... ....+++.+
T Consensus 155 ~~sK~a~~~~~~~~~~~~~~~~i~v~~i~pg~v~t~~~~~~~~~-------~~~~~~~~-~~~--------~~~~~~~~~ 218 (250)
T PRK08063 155 GVSKAALEALTRYLAVELAPKGIAVNAVSGGAVDTDALKHFPNR-------EELLEDAR-AKT--------PAGRMVEPE 218 (250)
T ss_pred HHHHHHHHHHHHHHHHHHhHhCeEEEeEecCcccCchhhhccCc-------hHHHHHHh-cCC--------CCCCCcCHH
Confidence 99999999998765 3579999999999977653322221 11111111 110 112368899
Q ss_pred HHHHHHHHHHHHhccCCCCCcEEEecCCC
Q 010075 307 MVVNAMIVAMVAHAKQPSDANIYHVGSSL 335 (519)
Q Consensus 307 dva~aii~a~~~~~~~~~~~~iyni~s~~ 335 (519)
|+|++++.++..... ...++++++.+|.
T Consensus 219 dva~~~~~~~~~~~~-~~~g~~~~~~gg~ 246 (250)
T PRK08063 219 DVANAVLFLCSPEAD-MIRGQTIIVDGGR 246 (250)
T ss_pred HHHHHHHHHcCchhc-CccCCEEEECCCe
Confidence 999999988864322 2236788888764
|
|
| >PRK05876 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.72 E-value=2.9e-16 Score=156.59 Aligned_cols=212 Identities=15% Similarity=0.088 Sum_probs=138.7
Q ss_pred cCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 010075 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (519)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (519)
++||+++||||+|+||++++++|++.| .+|++..|+... .+++.+ .++.. ..++.+
T Consensus 4 ~~~k~vlVTGas~gIG~ala~~La~~G---~~Vv~~~r~~~~---l~~~~~---------~l~~~---------~~~~~~ 59 (275)
T PRK05876 4 FPGRGAVITGGASGIGLATGTEFARRG---ARVVLGDVDKPG---LRQAVN---------HLRAE---------GFDVHG 59 (275)
T ss_pred cCCCEEEEeCCCchHHHHHHHHHHHCC---CEEEEEeCCHHH---HHHHHH---------HHHhc---------CCeEEE
Confidence 678999999999999999999999998 567888776422 122211 11111 135788
Q ss_pred EeccCCCCCCCCChhhhHHHHh-------cCccEEEEcCccCCc-------cccHHHHHHHhHHHHHHHHHHHHh----c
Q 010075 90 VPGDISSEDLGLKDSNLKEELW-------NELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKK----C 151 (519)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~-------~~vdiViH~Aa~v~f-------~~~~~~~~~~Nv~gt~~ll~~a~~----~ 151 (519)
+.+|++++. ....+. .++|+|||+||.... .+.++..+++|+.|+.++++.+.. .
T Consensus 60 ~~~Dv~d~~-------~v~~~~~~~~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~p~m~~~ 132 (275)
T PRK05876 60 VMCDVRHRE-------EVTHLADEAFRLLGHVDVVFSNAGIVVGGPIVEMTHDDWRWVIDVDLWGSIHTVEAFLPRLLEQ 132 (275)
T ss_pred EeCCCCCHH-------HHHHHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhc
Confidence 999999632 222332 358999999997532 245677789999999999888743 1
Q ss_pred cCCceEEEEecceeecCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcHH
Q 010075 152 VKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTY 231 (519)
Q Consensus 152 ~~l~~~V~vSTa~v~~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~Y 231 (519)
+...++|++||...+... .+...|
T Consensus 133 ~~~g~iv~isS~~~~~~~--------------------------------------------------------~~~~~Y 156 (275)
T PRK05876 133 GTGGHVVFTASFAGLVPN--------------------------------------------------------AGLGAY 156 (275)
T ss_pred CCCCEEEEeCChhhccCC--------------------------------------------------------CCCchH
Confidence 124689999997654311 234579
Q ss_pred HHHHHH----HHHHHHHh-hcCCcEEEEecCccccCCCCCCCcccccccccHHHHHHhhcCCceeeccCCCceeeeeeHH
Q 010075 232 VFTKTM----GEMLMQQS-KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVD 306 (519)
Q Consensus 232 ~~sK~~----aE~lv~~~-~~~lp~~IvRPs~V~g~~~~p~~gw~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~d~vpVD 306 (519)
+.||+. +|.+..++ ..++.+++++|+.|.++........ .. ............+......++++++
T Consensus 157 ~asK~a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~-~~--------~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (275)
T PRK05876 157 GVAKYGVVGLAETLAREVTADGIGVSVLCPMVVETNLVANSERI-RG--------AACAQSSTTGSPGPLPLQDDNLGVD 227 (275)
T ss_pred HHHHHHHHHHHHHHHHHhhhcCcEEEEEEeCccccccccchhhh-cC--------ccccccccccccccccccccCCCHH
Confidence 999996 55555555 4589999999999877643211000 00 0000000111223333456789999
Q ss_pred HHHHHHHHHHH
Q 010075 307 MVVNAMIVAMV 317 (519)
Q Consensus 307 dva~aii~a~~ 317 (519)
|||++++.++.
T Consensus 228 dva~~~~~ai~ 238 (275)
T PRK05876 228 DIAQLTADAIL 238 (275)
T ss_pred HHHHHHHHHHH
Confidence 99999999986
|
|
| >PRK07775 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.72 E-value=7.3e-16 Score=153.58 Aligned_cols=221 Identities=14% Similarity=0.156 Sum_probs=143.6
Q ss_pred cCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 010075 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (519)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (519)
..+|+++||||+|+||++++++|++.| .+|+++.|+... .+.+. +.++. ...++.+
T Consensus 8 ~~~~~vlVtGa~g~iG~~la~~L~~~G---~~V~~~~r~~~~---~~~~~---------~~~~~---------~~~~~~~ 63 (274)
T PRK07775 8 PDRRPALVAGASSGIGAATAIELAAAG---FPVALGARRVEK---CEELV---------DKIRA---------DGGEAVA 63 (274)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCC---CEEEEEeCCHHH---HHHHH---------HHHHh---------cCCeEEE
Confidence 456899999999999999999999988 578888886321 11111 11111 0246788
Q ss_pred EeccCCCCCCCCChhhhHHHHh-------cCccEEEEcCccCCc-------cccHHHHHHHhHHHHHHHHHHHHhc---c
Q 010075 90 VPGDISSEDLGLKDSNLKEELW-------NELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKC---V 152 (519)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~-------~~vdiViH~Aa~v~f-------~~~~~~~~~~Nv~gt~~ll~~a~~~---~ 152 (519)
+.+|+++++ ....++ ..+|+|||+||.... .+.+...+++|+.|+.++++.+.+. .
T Consensus 64 ~~~Dl~~~~-------~~~~~~~~~~~~~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~ 136 (274)
T PRK07775 64 FPLDVTDPD-------SVKSFVAQAEEALGEIEVLVSGAGDTYFGKLHEISTEQFESQVQIHLVGANRLATAVLPGMIER 136 (274)
T ss_pred EECCCCCHH-------HHHHHHHHHHHhcCCCCEEEECCCcCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc
Confidence 899999632 222322 368999999997532 1345667899999999998887531 2
Q ss_pred CCceEEEEecceeecCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcHHH
Q 010075 153 KLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYV 232 (519)
Q Consensus 153 ~l~~~V~vSTa~v~~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~Y~ 232 (519)
+..+||++||...+... +....|+
T Consensus 137 ~~g~iv~isS~~~~~~~--------------------------------------------------------~~~~~Y~ 160 (274)
T PRK07775 137 RRGDLIFVGSDVALRQR--------------------------------------------------------PHMGAYG 160 (274)
T ss_pred CCceEEEECChHhcCCC--------------------------------------------------------CCcchHH
Confidence 45689999997654321 1234699
Q ss_pred HHHHHHHHHHHHh-----hcCCcEEEEecCccccCCCCCCCcccccccccHHHHHHhhcCCceeeccCCCceeeeeeHHH
Q 010075 233 FTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDM 307 (519)
Q Consensus 233 ~sK~~aE~lv~~~-----~~~lp~~IvRPs~V~g~~~~p~~gw~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~d~vpVDd 307 (519)
.+|+..|.+++.+ ..+++++++|||.+.++...... . .....++..... .+ +.....++++||
T Consensus 161 ~sK~a~~~l~~~~~~~~~~~gi~v~~v~pG~~~t~~~~~~~---~--~~~~~~~~~~~~------~~-~~~~~~~~~~~d 228 (274)
T PRK07775 161 AAKAGLEAMVTNLQMELEGTGVRASIVHPGPTLTGMGWSLP---A--EVIGPMLEDWAK------WG-QARHDYFLRASD 228 (274)
T ss_pred HHHHHHHHHHHHHHHHhcccCeEEEEEeCCcccCcccccCC---h--hhhhHHHHHHHH------hc-ccccccccCHHH
Confidence 9999999999876 23799999999887554221100 0 001111111110 01 112356899999
Q ss_pred HHHHHHHHHHHhccCCCCCcEEEecC
Q 010075 308 VVNAMIVAMVAHAKQPSDANIYHVGS 333 (519)
Q Consensus 308 va~aii~a~~~~~~~~~~~~iyni~s 333 (519)
+|++++.++.... .+.+||+.-
T Consensus 229 va~a~~~~~~~~~----~~~~~~~~~ 250 (274)
T PRK07775 229 LARAITFVAETPR----GAHVVNMEV 250 (274)
T ss_pred HHHHHHHHhcCCC----CCCeeEEee
Confidence 9999999886421 256888864
|
|
| >PRK06138 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.71 E-value=7e-16 Score=151.14 Aligned_cols=223 Identities=15% Similarity=0.173 Sum_probs=146.6
Q ss_pred cCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 010075 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (519)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (519)
++||+++||||+|+||++|++.|++.| .+|+++.|+.... +...++ ++ ...++.+
T Consensus 3 ~~~k~~lItG~sg~iG~~la~~l~~~G---~~v~~~~r~~~~~---~~~~~~---------~~----------~~~~~~~ 57 (252)
T PRK06138 3 LAGRVAIVTGAGSGIGRATAKLFAREG---ARVVVADRDAEAA---ERVAAA---------IA----------AGGRAFA 57 (252)
T ss_pred CCCcEEEEeCCCchHHHHHHHHHHHCC---CeEEEecCCHHHH---HHHHHH---------Hh----------cCCeEEE
Confidence 358999999999999999999999988 6788888874321 111100 11 0256889
Q ss_pred EeccCCCCCCCCChhhhHHHHh-------cCccEEEEcCccCCc-------cccHHHHHHHhHHHHHHHHHHHH----hc
Q 010075 90 VPGDISSEDLGLKDSNLKEELW-------NELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAK----KC 151 (519)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~-------~~vdiViH~Aa~v~f-------~~~~~~~~~~Nv~gt~~ll~~a~----~~ 151 (519)
+.+|++++ +..+.++ .++|+|||+|+.... .+.++..+++|+.|+.++.+.+. +.
T Consensus 58 ~~~D~~~~-------~~~~~~~~~i~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~ 130 (252)
T PRK06138 58 RQGDVGSA-------EAVEALVDFVAARWGRLDVLVNNAGFGCGGTVVTTDEADWDAVMRVNVGGVFLWAKYAIPIMQRQ 130 (252)
T ss_pred EEcCCCCH-------HHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhhhhhHHHHHHHHHHHHHhc
Confidence 99999963 2222332 379999999997532 23466679999999987766553 32
Q ss_pred cCCceEEEEecceeecCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcHH
Q 010075 152 VKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTY 231 (519)
Q Consensus 152 ~~l~~~V~vSTa~v~~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~Y 231 (519)
+.++++++||....... ...+.|
T Consensus 131 -~~~~ii~~sS~~~~~~~--------------------------------------------------------~~~~~Y 153 (252)
T PRK06138 131 -GGGSIVNTASQLALAGG--------------------------------------------------------RGRAAY 153 (252)
T ss_pred -CCeEEEEECChhhccCC--------------------------------------------------------CCccHH
Confidence 56789999997543211 123579
Q ss_pred HHHHHHHHHHHHHh-----hcCCcEEEEecCccccCCCCCCCcccccccccHHHHHHhhcCCceeeccCCCceeeeeeHH
Q 010075 232 VFTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVD 306 (519)
Q Consensus 232 ~~sK~~aE~lv~~~-----~~~lp~~IvRPs~V~g~~~~p~~gw~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~d~vpVD 306 (519)
+.+|+..+.+++.+ ..+++++++||+.+.++.......+... +. .+.....+ ......+++++
T Consensus 154 ~~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~~~~~~~~---~~-~~~~~~~~--------~~~~~~~~~~~ 221 (252)
T PRK06138 154 VASKGAIASLTRAMALDHATDGIRVNAVAPGTIDTPYFRRIFARHAD---PE-ALREALRA--------RHPMNRFGTAE 221 (252)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCeEEEEEEECCccCcchhhhhccccC---hH-HHHHHHHh--------cCCCCCCcCHH
Confidence 99999999988765 2479999999999988764322222111 11 11111111 01122368899
Q ss_pred HHHHHHHHHHHHhccCCCCCcEEEecCC
Q 010075 307 MVVNAMIVAMVAHAKQPSDANIYHVGSS 334 (519)
Q Consensus 307 dva~aii~a~~~~~~~~~~~~iyni~s~ 334 (519)
|++++++.++..... ...+.++.+.+|
T Consensus 222 d~a~~~~~l~~~~~~-~~~g~~~~~~~g 248 (252)
T PRK06138 222 EVAQAALFLASDESS-FATGTTLVVDGG 248 (252)
T ss_pred HHHHHHHHHcCchhc-CccCCEEEECCC
Confidence 999999998865332 223567777655
|
|
| >KOG1431 consensus GDP-L-fucose synthetase [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=99.71 E-value=3.2e-16 Score=144.64 Aligned_cols=225 Identities=16% Similarity=0.154 Sum_probs=160.2
Q ss_pred CEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEEec
Q 010075 13 KTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVPG 92 (519)
Q Consensus 13 k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v~g 92 (519)
++|||||+||.+|+++.+.+...+++= .=.+++-+ -+.
T Consensus 2 ~kIlVtGg~GLVGsAi~~vv~~q~~~~-e~wvf~~s-----------------------------------------kd~ 39 (315)
T KOG1431|consen 2 KKILVTGGTGLVGSAIVKVVQEQGFDD-ENWVFIGS-----------------------------------------KDA 39 (315)
T ss_pred ceEEEecCCchHHHHHHHHHHhcCCCC-cceEEecc-----------------------------------------ccc
Confidence 689999999999999999999877531 11122111 156
Q ss_pred cCCCCCCCCChhhhHHHHhc--CccEEEEcCccCCc----cccHHHHHHHhHHHHHHHHHHHHhccCCceEEEEecceee
Q 010075 93 DISSEDLGLKDSNLKEELWN--ELDIMVNSAAITKF----DERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAYVA 166 (519)
Q Consensus 93 Dl~~~~lgls~~~~~~~l~~--~vdiViH~Aa~v~f----~~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V~vSTa~v~ 166 (519)
|+++ .++ .+.+++ ++..|||.||.++- ....-+.++.|+.-..|++..|-+. ++++++.+.|..++
T Consensus 40 DLt~------~a~-t~~lF~~ekPthVIhlAAmVGGlf~N~~ynldF~r~Nl~indNVlhsa~e~-gv~K~vsclStCIf 111 (315)
T KOG1431|consen 40 DLTN------LAD-TRALFESEKPTHVIHLAAMVGGLFHNNTYNLDFIRKNLQINDNVLHSAHEH-GVKKVVSCLSTCIF 111 (315)
T ss_pred cccc------hHH-HHHHHhccCCceeeehHhhhcchhhcCCCchHHHhhcceechhHHHHHHHh-chhhhhhhcceeec
Confidence 7774 333 346654 69999999999852 2334566889999999999999996 89999999888888
Q ss_pred cCcCC-eeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcHHHHHHHHHHHHHHHh
Q 010075 167 GERTG-LILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLMQQS 245 (519)
Q Consensus 167 ~~~~~-~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~Y~~sK~~aE~lv~~~ 245 (519)
.+... +|+|.....++ +++..-.|++.|.++.-.-+.|
T Consensus 112 Pdkt~yPIdEtmvh~gp-----------------------------------------phpsN~gYsyAKr~idv~n~aY 150 (315)
T KOG1431|consen 112 PDKTSYPIDETMVHNGP-----------------------------------------PHPSNFGYSYAKRMIDVQNQAY 150 (315)
T ss_pred CCCCCCCCCHHHhccCC-----------------------------------------CCCCchHHHHHHHHHHHHHHHH
Confidence 76542 44444332111 1122237999998888777766
Q ss_pred --hcCCcEEEEecCccccCCCCCCCcccccccccHHHHHHh----hcCC-ceeeccCCCceeeeeeHHHHHHHHHHHHHH
Q 010075 246 --KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVAS----AQGN-LRCLVGETKVIMDVIPVDMVVNAMIVAMVA 318 (519)
Q Consensus 246 --~~~lp~~IvRPs~V~g~~~~p~~gw~~~~~~~~~~i~~~----~~g~-~~~~~~~~~~~~d~vpVDdva~aii~a~~~ 318 (519)
..+...+.+-|.+|||+...--| ++-..+++++... ..|. ...++|.|...+.|+|+||+|++++.++.+
T Consensus 151 ~~qhg~~~tsviPtNvfGphDNfnp---e~sHVlPali~r~h~ak~~gtd~~~VwGsG~PlRqFiys~DLA~l~i~vlr~ 227 (315)
T KOG1431|consen 151 RQQHGRDYTSVIPTNVFGPHDNFNP---ENSHVLPALIHRFHEAKRNGTDELTVWGSGSPLRQFIYSDDLADLFIWVLRE 227 (315)
T ss_pred HHHhCCceeeeccccccCCCCCCCc---ccccchHHHHHHHHHHHhcCCceEEEecCCChHHHHhhHhHHHHHHHHHHHh
Confidence 56888999999999999873221 2224455555433 4454 567889999999999999999999999986
Q ss_pred hccCCCCCcEEEecCCC
Q 010075 319 HAKQPSDANIYHVGSSL 335 (519)
Q Consensus 319 ~~~~~~~~~iyni~s~~ 335 (519)
-.. .+-.++++|+
T Consensus 228 Y~~----vEpiils~ge 240 (315)
T KOG1431|consen 228 YEG----VEPIILSVGE 240 (315)
T ss_pred hcC----ccceEeccCc
Confidence 432 3456788876
|
|
| >PRK06077 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.71 E-value=2.5e-16 Score=154.27 Aligned_cols=229 Identities=14% Similarity=0.108 Sum_probs=144.6
Q ss_pred CCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEE
Q 010075 11 ENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFV 90 (519)
Q Consensus 11 ~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v 90 (519)
++++|+||||+||||++++++|++.| .+|++..|+.... .... ...+++. ..++..+
T Consensus 5 ~~~~vlitGasg~iG~~l~~~l~~~g---~~v~~~~~~~~~~--~~~~---------~~~~~~~---------~~~~~~~ 61 (252)
T PRK06077 5 KDKVVVVTGSGRGIGRAIAVRLAKEG---SLVVVNAKKRAEE--MNET---------LKMVKEN---------GGEGIGV 61 (252)
T ss_pred CCcEEEEeCCCChHHHHHHHHHHHCC---CEEEEEeCCChHH--HHHH---------HHHHHHc---------CCeeEEE
Confidence 57899999999999999999999988 4666766653211 1110 0111110 1356788
Q ss_pred eccCCCCCCCCChhhhHHHHhcCccEEEEcCccCCc-------cccHHHHHHHhHHHHHHHHHHHHhc-cCCceEEEEec
Q 010075 91 PGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKC-VKLKVFVHVST 162 (519)
Q Consensus 91 ~gDl~~~~lgls~~~~~~~l~~~vdiViH~Aa~v~f-------~~~~~~~~~~Nv~gt~~ll~~a~~~-~~l~~~V~vST 162 (519)
.+|++++.---...+.......++|+|||+||.... .+.++..+++|+.|+..+++.+.+. +...+||++||
T Consensus 62 ~~D~~~~~~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~sS 141 (252)
T PRK06077 62 LADVSTREGCETLAKATIDRYGVADILVNNAGLGLFSPFLNVDDKLIDKHISTDFKSVIYCSQELAKEMREGGAIVNIAS 141 (252)
T ss_pred EeccCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHhHhCHHHHHHHHHHHHHhhcCcEEEEEcc
Confidence 999996421000000011112468999999996432 1234677899999999999988653 23358999999
Q ss_pred ceeecCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcHHHHHHHHHHHHH
Q 010075 163 AYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLM 242 (519)
Q Consensus 163 a~v~~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~Y~~sK~~aE~lv 242 (519)
...+... .+.+.|+.||+..|.++
T Consensus 142 ~~~~~~~--------------------------------------------------------~~~~~Y~~sK~~~~~~~ 165 (252)
T PRK06077 142 VAGIRPA--------------------------------------------------------YGLSIYGAMKAAVINLT 165 (252)
T ss_pred hhccCCC--------------------------------------------------------CCchHHHHHHHHHHHHH
Confidence 7654321 23467999999999988
Q ss_pred HHh----hcCCcEEEEecCccccCCCCCCCcccccccccHHHHHHhhcCCceeeccCCCceeeeeeHHHHHHHHHHHHHH
Q 010075 243 QQS----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMIVAMVA 318 (519)
Q Consensus 243 ~~~----~~~lp~~IvRPs~V~g~~~~p~~gw~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~d~vpVDdva~aii~a~~~ 318 (519)
+.+ .+++.+.+++||.|.++.......+.. ....-. . . .......+++++|+|++++.++..
T Consensus 166 ~~l~~~~~~~i~v~~v~Pg~i~t~~~~~~~~~~~---~~~~~~---~-~-------~~~~~~~~~~~~dva~~~~~~~~~ 231 (252)
T PRK06077 166 KYLALELAPKIRVNAIAPGFVKTKLGESLFKVLG---MSEKEF---A-E-------KFTLMGKILDPEEVAEFVAAILKI 231 (252)
T ss_pred HHHHHHHhcCCEEEEEeeCCccChHHHhhhhccc---ccHHHH---H-H-------hcCcCCCCCCHHHHHHHHHHHhCc
Confidence 865 347899999999997764321111100 000000 0 0 011123689999999999998853
Q ss_pred hccCCCCCcEEEecCCC
Q 010075 319 HAKQPSDANIYHVGSSL 335 (519)
Q Consensus 319 ~~~~~~~~~iyni~s~~ 335 (519)
.. ..+++||+.+|.
T Consensus 232 ~~---~~g~~~~i~~g~ 245 (252)
T PRK06077 232 ES---ITGQVFVLDSGE 245 (252)
T ss_pred cc---cCCCeEEecCCe
Confidence 21 136799999874
|
|
| >PRK07890 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.71 E-value=5.5e-16 Score=152.52 Aligned_cols=236 Identities=17% Similarity=0.188 Sum_probs=147.9
Q ss_pred hcCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceE
Q 010075 9 FLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKIT 88 (519)
Q Consensus 9 ~~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~ 88 (519)
++++|+||||||||+||+++++.|++.| .+|+++.|+... .+.+.++ +... ..++.
T Consensus 2 ~l~~k~vlItGa~~~IG~~la~~l~~~G---~~V~~~~r~~~~---~~~~~~~---------~~~~---------~~~~~ 57 (258)
T PRK07890 2 LLKGKVVVVSGVGPGLGRTLAVRAARAG---ADVVLAARTAER---LDEVAAE---------IDDL---------GRRAL 57 (258)
T ss_pred ccCCCEEEEECCCCcHHHHHHHHHHHcC---CEEEEEeCCHHH---HHHHHHH---------HHHh---------CCceE
Confidence 5678999999999999999999999998 578888886422 1222211 1110 24678
Q ss_pred EEeccCCCCCCCCChhhhHHHHhcCccEEEEcCccCC----c----cccHHHHHHHhHHHHHHHHHHHHhc--cCCceEE
Q 010075 89 FVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITK----F----DERYDVAFGINTLGVIHLVNFAKKC--VKLKVFV 158 (519)
Q Consensus 89 ~v~gDl~~~~lgls~~~~~~~l~~~vdiViH~Aa~v~----f----~~~~~~~~~~Nv~gt~~ll~~a~~~--~~l~~~V 158 (519)
++.+|++++.......+.......++|+|||+|+... + .+.++..+++|+.|+..+++.+... +...++|
T Consensus 58 ~~~~D~~~~~~~~~~~~~~~~~~g~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~ii 137 (258)
T PRK07890 58 AVPTDITDEDQCANLVALALERFGRVDALVNNAFRVPSMKPLADADFAHWRAVIELNVLGTLRLTQAFTPALAESGGSIV 137 (258)
T ss_pred EEecCCCCHHHHHHHHHHHHHHcCCccEEEECCccCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCEEE
Confidence 9999999632100000001112246899999998642 1 2456778999999999999998652 1235899
Q ss_pred EEecceeecCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcHHHHHHHHH
Q 010075 159 HVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMG 238 (519)
Q Consensus 159 ~vSTa~v~~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~Y~~sK~~a 238 (519)
++||....... ...+.|+.+|...
T Consensus 138 ~~sS~~~~~~~--------------------------------------------------------~~~~~Y~~sK~a~ 161 (258)
T PRK07890 138 MINSMVLRHSQ--------------------------------------------------------PKYGAYKMAKGAL 161 (258)
T ss_pred EEechhhccCC--------------------------------------------------------CCcchhHHHHHHH
Confidence 99997543211 2235799999999
Q ss_pred HHHHHHh-----hcCCcEEEEecCccccCCCCCCCccccccccc--HHHHHHhhcCCceeeccCCCceeeeeeHHHHHHH
Q 010075 239 EMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTI--NTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNA 311 (519)
Q Consensus 239 E~lv~~~-----~~~lp~~IvRPs~V~g~~~~p~~gw~~~~~~~--~~~i~~~~~g~~~~~~~~~~~~~d~vpVDdva~a 311 (519)
|.+++.+ ..++++.++|||.|+++...+.-.......+. ..+...... ......+.+++|+|++
T Consensus 162 ~~l~~~~a~~~~~~~i~v~~v~pg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~dva~a 232 (258)
T PRK07890 162 LAASQSLATELGPQGIRVNSVAPGYIWGDPLKGYFRHQAGKYGVTVEQIYAETAA---------NSDLKRLPTDDEVASA 232 (258)
T ss_pred HHHHHHHHHHHhhcCcEEEEEeCCccCcHHHHHHhhhcccccCCCHHHHHHHHhh---------cCCccccCCHHHHHHH
Confidence 9988866 24799999999999997542211100000000 111111111 1112246789999999
Q ss_pred HHHHHHHhccCCCCCcEEEecCC
Q 010075 312 MIVAMVAHAKQPSDANIYHVGSS 334 (519)
Q Consensus 312 ii~a~~~~~~~~~~~~iyni~s~ 334 (519)
++.++..... .-.++++.+.+|
T Consensus 233 ~~~l~~~~~~-~~~G~~i~~~gg 254 (258)
T PRK07890 233 VLFLASDLAR-AITGQTLDVNCG 254 (258)
T ss_pred HHHHcCHhhh-CccCcEEEeCCc
Confidence 9888864321 123566666655
|
|
| >PRK05875 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.71 E-value=1.2e-15 Score=151.97 Aligned_cols=225 Identities=16% Similarity=0.188 Sum_probs=148.1
Q ss_pred cCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 010075 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (519)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (519)
+++|+|+||||||+||+++++.|++.| .+|+++.|+.... +.+.++ +.... ...++.+
T Consensus 5 ~~~k~vlItGasg~IG~~la~~l~~~G---~~V~~~~r~~~~~---~~~~~~---------l~~~~-------~~~~~~~ 62 (276)
T PRK05875 5 FQDRTYLVTGGGSGIGKGVAAGLVAAG---AAVMIVGRNPDKL---AAAAEE---------IEALK-------GAGAVRY 62 (276)
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCC---CeEEEEeCCHHHH---HHHHHH---------HHhcc-------CCCceEE
Confidence 678999999999999999999999988 5788888864321 111111 11100 0246788
Q ss_pred EeccCCCCCCCCChhhhHHHHh-------cCccEEEEcCccCCc--------cccHHHHHHHhHHHHHHHHHHHHhc---
Q 010075 90 VPGDISSEDLGLKDSNLKEELW-------NELDIMVNSAAITKF--------DERYDVAFGINTLGVIHLVNFAKKC--- 151 (519)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~-------~~vdiViH~Aa~v~f--------~~~~~~~~~~Nv~gt~~ll~~a~~~--- 151 (519)
+.+|++++ +..+.++ ..+|+|||+||.... .+.+...+++|+.|+..+++.+.+.
T Consensus 63 ~~~Dl~~~-------~~~~~~~~~~~~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~ 135 (276)
T PRK05875 63 EPADVTDE-------DQVARAVDAATAWHGRLHGVVHCAGGSETIGPITQIDSDAWRRTVDLNVNGTMYVLKHAARELVR 135 (276)
T ss_pred EEcCCCCH-------HHHHHHHHHHHHHcCCCCEEEECCCcccCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHh
Confidence 99999963 2222333 368999999986421 1346677899999999998876542
Q ss_pred cCCceEEEEecceeecCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcHH
Q 010075 152 VKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTY 231 (519)
Q Consensus 152 ~~l~~~V~vSTa~v~~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~Y 231 (519)
.+-.+|+++||....... ++.+.|
T Consensus 136 ~~~g~iv~~sS~~~~~~~--------------------------------------------------------~~~~~Y 159 (276)
T PRK05875 136 GGGGSFVGISSIAASNTH--------------------------------------------------------RWFGAY 159 (276)
T ss_pred cCCcEEEEEechhhcCCC--------------------------------------------------------CCCcch
Confidence 133589999997654211 234679
Q ss_pred HHHHHHHHHHHHHh-----hcCCcEEEEecCccccCCCCCCCcccccccccHHHHHHhhcCCceeeccCCCceeeeeeHH
Q 010075 232 VFTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVD 306 (519)
Q Consensus 232 ~~sK~~aE~lv~~~-----~~~lp~~IvRPs~V~g~~~~p~~gw~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~d~vpVD 306 (519)
+.+|+..|.+++.+ ..+++++++||+.+.++...+. . ...........+ .....++.++
T Consensus 160 ~~sK~a~~~~~~~~~~~~~~~~i~v~~i~Pg~v~t~~~~~~---~----~~~~~~~~~~~~---------~~~~~~~~~~ 223 (276)
T PRK05875 160 GVTKSAVDHLMKLAADELGPSWVRVNSIRPGLIRTDLVAPI---T----ESPELSADYRAC---------TPLPRVGEVE 223 (276)
T ss_pred HHHHHHHHHHHHHHHHHhcccCeEEEEEecCccCCcccccc---c----cCHHHHHHHHcC---------CCCCCCcCHH
Confidence 99999999999865 3468999999998876543211 0 001111111111 1123356799
Q ss_pred HHHHHHHHHHHHhccCCCCCcEEEecCCCC
Q 010075 307 MVVNAMIVAMVAHAKQPSDANIYHVGSSLR 336 (519)
Q Consensus 307 dva~aii~a~~~~~~~~~~~~iyni~s~~~ 336 (519)
|+|+++..++..... .-.+++||++++..
T Consensus 224 dva~~~~~l~~~~~~-~~~g~~~~~~~g~~ 252 (276)
T PRK05875 224 DVANLAMFLLSDAAS-WITGQVINVDGGHM 252 (276)
T ss_pred HHHHHHHHHcCchhc-CcCCCEEEECCCee
Confidence 999999999864332 12368999988844
|
|
| >PRK06128 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=99.71 E-value=4.9e-16 Score=156.94 Aligned_cols=231 Identities=13% Similarity=0.108 Sum_probs=148.3
Q ss_pred cCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 010075 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (519)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (519)
++||+||||||+|+||++++++|++.| .+|++..|+..... .+.+.+. ++. . ..++.+
T Consensus 53 l~~k~vlITGas~gIG~~~a~~l~~~G---~~V~i~~~~~~~~~-~~~~~~~---------~~~-~--------~~~~~~ 110 (300)
T PRK06128 53 LQGRKALITGADSGIGRATAIAFAREG---ADIALNYLPEEEQD-AAEVVQL---------IQA-E--------GRKAVA 110 (300)
T ss_pred cCCCEEEEecCCCcHHHHHHHHHHHcC---CEEEEEeCCcchHH-HHHHHHH---------HHH-c--------CCeEEE
Confidence 568999999999999999999999998 45666666543221 1112111 111 0 246788
Q ss_pred EeccCCCCCCCCChhhhHHHHhcCccEEEEcCccCC----c----cccHHHHHHHhHHHHHHHHHHHHhc-cCCceEEEE
Q 010075 90 VPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITK----F----DERYDVAFGINTLGVIHLVNFAKKC-VKLKVFVHV 160 (519)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~~~vdiViH~Aa~v~----f----~~~~~~~~~~Nv~gt~~ll~~a~~~-~~l~~~V~v 160 (519)
+.+|++++..-....+...+...++|+|||+||... + .+.++..+++|+.|+..+++.+... ..-.++|++
T Consensus 111 ~~~Dl~~~~~v~~~~~~~~~~~g~iD~lV~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~iv~~ 190 (300)
T PRK06128 111 LPGDLKDEAFCRQLVERAVKELGGLDILVNIAGKQTAVKDIADITTEQFDATFKTNVYAMFWLCKAAIPHLPPGASIINT 190 (300)
T ss_pred EecCCCCHHHHHHHHHHHHHHhCCCCEEEECCcccCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhcCcCCEEEEE
Confidence 999999632100000001112246999999999642 1 2467888999999999999998753 233589999
Q ss_pred ecceeecCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcHHHHHHHHHHH
Q 010075 161 STAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEM 240 (519)
Q Consensus 161 STa~v~~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~Y~~sK~~aE~ 240 (519)
||...+... .....|+.||+..+.
T Consensus 191 sS~~~~~~~--------------------------------------------------------~~~~~Y~asK~a~~~ 214 (300)
T PRK06128 191 GSIQSYQPS--------------------------------------------------------PTLLDYASTKAAIVA 214 (300)
T ss_pred CCccccCCC--------------------------------------------------------CCchhHHHHHHHHHH
Confidence 998765421 112459999999999
Q ss_pred HHHHh-----hcCCcEEEEecCccccCCCCCCCcccccccccHHHHHHhhcCCceeeccCCCceeeeeeHHHHHHHHHHH
Q 010075 241 LMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMIVA 315 (519)
Q Consensus 241 lv~~~-----~~~lp~~IvRPs~V~g~~~~p~~gw~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~d~vpVDdva~aii~a 315 (519)
+++.. ..++++.+++||.|.++..... + . ....+..+..+ .....+...+|++.+++.+
T Consensus 215 ~~~~la~el~~~gI~v~~v~PG~i~t~~~~~~-~-~-----~~~~~~~~~~~---------~p~~r~~~p~dva~~~~~l 278 (300)
T PRK06128 215 FTKALAKQVAEKGIRVNAVAPGPVWTPLQPSG-G-Q-----PPEKIPDFGSE---------TPMKRPGQPVEMAPLYVLL 278 (300)
T ss_pred HHHHHHHHhhhcCcEEEEEEECcCcCCCcccC-C-C-----CHHHHHHHhcC---------CCCCCCcCHHHHHHHHHHH
Confidence 98765 3589999999999988754210 0 0 01111111111 1123456789999999888
Q ss_pred HHHhccCCCCCcEEEecCCC
Q 010075 316 MVAHAKQPSDANIYHVGSSL 335 (519)
Q Consensus 316 ~~~~~~~~~~~~iyni~s~~ 335 (519)
+.... .--.+++|++.+|.
T Consensus 279 ~s~~~-~~~~G~~~~v~gg~ 297 (300)
T PRK06128 279 ASQES-SYVTGEVFGVTGGL 297 (300)
T ss_pred hCccc-cCccCcEEeeCCCE
Confidence 75322 11236899998874
|
|
| >PRK08628 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.71 E-value=9.9e-16 Score=150.86 Aligned_cols=225 Identities=15% Similarity=0.244 Sum_probs=147.8
Q ss_pred cCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 010075 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (519)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (519)
++|++++||||||+||+++++.|++.| .+|+++.|+.... ++.++ +++. ..++.+
T Consensus 5 l~~~~ilItGasggiG~~la~~l~~~G---~~v~~~~r~~~~~----~~~~~---------~~~~---------~~~~~~ 59 (258)
T PRK08628 5 LKDKVVIVTGGASGIGAAISLRLAEEG---AIPVIFGRSAPDD----EFAEE---------LRAL---------QPRAEF 59 (258)
T ss_pred cCCCEEEEeCCCChHHHHHHHHHHHcC---CcEEEEcCChhhH----HHHHH---------HHhc---------CCceEE
Confidence 678999999999999999999999998 5678888875432 11111 1111 246889
Q ss_pred EeccCCCCCCCCChhhhHHHHh-------cCccEEEEcCccCC---cc---ccHHHHHHHhHHHHHHHHHHHHhc--cCC
Q 010075 90 VPGDISSEDLGLKDSNLKEELW-------NELDIMVNSAAITK---FD---ERYDVAFGINTLGVIHLVNFAKKC--VKL 154 (519)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~-------~~vdiViH~Aa~v~---f~---~~~~~~~~~Nv~gt~~ll~~a~~~--~~l 154 (519)
+.+|++++. + .+.++ ..+|+|||+||... +. +.++..+++|+.++..+.+.+.+. .+.
T Consensus 60 ~~~D~~~~~------~-~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~ 132 (258)
T PRK08628 60 VQVDLTDDA------Q-CRDAVEQTVAKFGRIDGLVNNAGVNDGVGLEAGREAFVASLERNLIHYYVMAHYCLPHLKASR 132 (258)
T ss_pred EEccCCCHH------H-HHHHHHHHHHhcCCCCEEEECCcccCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHhhccC
Confidence 999999632 2 22322 36899999999632 11 457778999999999998887542 134
Q ss_pred ceEEEEecceeecCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcHHHHH
Q 010075 155 KVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFT 234 (519)
Q Consensus 155 ~~~V~vSTa~v~~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~Y~~s 234 (519)
.+||++||....... .....|+.|
T Consensus 133 ~~iv~~ss~~~~~~~--------------------------------------------------------~~~~~Y~~s 156 (258)
T PRK08628 133 GAIVNISSKTALTGQ--------------------------------------------------------GGTSGYAAA 156 (258)
T ss_pred cEEEEECCHHhccCC--------------------------------------------------------CCCchhHHH
Confidence 689999997543211 123579999
Q ss_pred HHHHHHHHHHh-----hcCCcEEEEecCccccCCCCCCCcccccccccHHHHHHhhcCCceeeccCCCceeeeeeHHHHH
Q 010075 235 KTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVV 309 (519)
Q Consensus 235 K~~aE~lv~~~-----~~~lp~~IvRPs~V~g~~~~p~~gw~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~d~vpVDdva 309 (519)
|+..|.+++.. ..++++..++||.|.++...+ |................. ++. + ..++..+|+|
T Consensus 157 K~a~~~~~~~l~~e~~~~~i~v~~v~pg~v~t~~~~~---~~~~~~~~~~~~~~~~~~----~~~-~---~~~~~~~dva 225 (258)
T PRK08628 157 KGAQLALTREWAVALAKDGVRVNAVIPAEVMTPLYEN---WIATFDDPEAKLAAITAK----IPL-G---HRMTTAEEIA 225 (258)
T ss_pred HHHHHHHHHHHHHHHhhcCeEEEEEecCccCCHHHHH---HhhhccCHHHHHHHHHhc----CCc-c---ccCCCHHHHH
Confidence 99999999865 347999999999998875321 222211111111111111 010 0 1367889999
Q ss_pred HHHHHHHHHhccCCCCCcEEEecCC
Q 010075 310 NAMIVAMVAHAKQPSDANIYHVGSS 334 (519)
Q Consensus 310 ~aii~a~~~~~~~~~~~~iyni~s~ 334 (519)
++++.++...... ..+..|.+.++
T Consensus 226 ~~~~~l~~~~~~~-~~g~~~~~~gg 249 (258)
T PRK08628 226 DTAVFLLSERSSH-TTGQWLFVDGG 249 (258)
T ss_pred HHHHHHhChhhcc-ccCceEEecCC
Confidence 9999988654222 23567777655
|
|
| >TIGR03206 benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase | Back alignment and domain information |
|---|
Probab=99.71 E-value=1.3e-15 Score=149.02 Aligned_cols=225 Identities=15% Similarity=0.154 Sum_probs=146.9
Q ss_pred cCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 010075 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (519)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (519)
+++++|+|||||||||++++++|++.| .+|+++.|+... .+++.++ +++ ...++.+
T Consensus 1 ~~~~~ilItGas~~iG~~la~~l~~~g---~~v~~~~r~~~~---~~~~~~~---------~~~---------~~~~~~~ 56 (250)
T TIGR03206 1 LKDKTAIVTGGGGGIGGATCRRFAEEG---AKVAVFDLNREA---AEKVAAD---------IRA---------KGGNAQA 56 (250)
T ss_pred CCCCEEEEeCCCChHHHHHHHHHHHCC---CEEEEecCCHHH---HHHHHHH---------HHh---------cCCcEEE
Confidence 468999999999999999999999988 577888886522 2222211 111 0246889
Q ss_pred EeccCCCCCCCCChhhhHHHHh-------cCccEEEEcCccCCc-------cccHHHHHHHhHHHHHHHHHHHHhc---c
Q 010075 90 VPGDISSEDLGLKDSNLKEELW-------NELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKC---V 152 (519)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~-------~~vdiViH~Aa~v~f-------~~~~~~~~~~Nv~gt~~ll~~a~~~---~ 152 (519)
+.+|++++ +..+.+. .++|+|||+|+.... .+.++..+++|+.++.++++.+... .
T Consensus 57 ~~~d~~~~-------~~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~ 129 (250)
T TIGR03206 57 FACDITDR-------DSVDTAVAAAEQALGPVDVLVNNAGWDKFGPFTKTEPPLWERLIAINLTGALHMHHAVLPGMVER 129 (250)
T ss_pred EEcCCCCH-------HHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc
Confidence 99999953 2222332 368999999986431 2345677999999999988877521 2
Q ss_pred CCceEEEEecceeecCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcHHH
Q 010075 153 KLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYV 232 (519)
Q Consensus 153 ~l~~~V~vSTa~v~~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~Y~ 232 (519)
+.+++|++||...+.... ....|+
T Consensus 130 ~~~~ii~iss~~~~~~~~--------------------------------------------------------~~~~Y~ 153 (250)
T TIGR03206 130 GAGRIVNIASDAARVGSS--------------------------------------------------------GEAVYA 153 (250)
T ss_pred CCeEEEEECchhhccCCC--------------------------------------------------------CCchHH
Confidence 567899999986654221 134699
Q ss_pred HHHHHHHHHHHHh-----hcCCcEEEEecCccccCCCCCCCcccccccccHHHHHHhhcCCceeeccCCCceeeeeeHHH
Q 010075 233 FTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDM 307 (519)
Q Consensus 233 ~sK~~aE~lv~~~-----~~~lp~~IvRPs~V~g~~~~p~~gw~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~d~vpVDd 307 (519)
.+|++.+.+++.+ ..++++.++||+.++++......++.. .+..+...+..... ...+...+|
T Consensus 154 ~sK~a~~~~~~~la~~~~~~~i~v~~v~pg~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~---------~~~~~~~~d 221 (250)
T TIGR03206 154 ACKGGLVAFSKTMAREHARHGITVNVVCPGPTDTALLDDICGGAE---NPEKLREAFTRAIP---------LGRLGQPDD 221 (250)
T ss_pred HHHHHHHHHHHHHHHHHhHhCcEEEEEecCcccchhHHhhhhccC---ChHHHHHHHHhcCC---------ccCCcCHHH
Confidence 9998888887765 247999999999998875422211111 11112222211111 112345789
Q ss_pred HHHHHHHHHHHhccCCCCCcEEEecCC
Q 010075 308 VVNAMIVAMVAHAKQPSDANIYHVGSS 334 (519)
Q Consensus 308 va~aii~a~~~~~~~~~~~~iyni~s~ 334 (519)
+|+++..++.... ..-.++++++++|
T Consensus 222 va~~~~~l~~~~~-~~~~g~~~~~~~g 247 (250)
T TIGR03206 222 LPGAILFFSSDDA-SFITGQVLSVSGG 247 (250)
T ss_pred HHHHHHHHcCccc-CCCcCcEEEeCCC
Confidence 9999999876432 2223688999776
|
Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate. |
| >PRK05717 oxidoreductase; Validated | Back alignment and domain information |
|---|
Probab=99.71 E-value=4.3e-16 Score=153.33 Aligned_cols=223 Identities=13% Similarity=0.096 Sum_probs=143.3
Q ss_pred hhcCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCce
Q 010075 8 EFLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKI 87 (519)
Q Consensus 8 ~~~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v 87 (519)
-.++||+|+||||+|+||++++++|++.| .+|+++.|+.... +.+. ++ ...++
T Consensus 6 ~~~~~k~vlItG~sg~IG~~~a~~l~~~g---~~v~~~~~~~~~~---~~~~-------------~~--------~~~~~ 58 (255)
T PRK05717 6 PGHNGRVALVTGAARGIGLGIAAWLIAEG---WQVVLADLDRERG---SKVA-------------KA--------LGENA 58 (255)
T ss_pred cccCCCEEEEeCCcchHHHHHHHHHHHcC---CEEEEEcCCHHHH---HHHH-------------HH--------cCCce
Confidence 35678999999999999999999999988 5778887754221 1111 00 12467
Q ss_pred EEEeccCCCCCCCCChhhhHHHH---hcCccEEEEcCccCCc---------cccHHHHHHHhHHHHHHHHHHHHhc--cC
Q 010075 88 TFVPGDISSEDLGLKDSNLKEEL---WNELDIMVNSAAITKF---------DERYDVAFGINTLGVIHLVNFAKKC--VK 153 (519)
Q Consensus 88 ~~v~gDl~~~~lgls~~~~~~~l---~~~vdiViH~Aa~v~f---------~~~~~~~~~~Nv~gt~~ll~~a~~~--~~ 153 (519)
.++.+|+++++.- ....+.+ ..++|+|||+||.... .+.++..+++|+.|+.++++.+.+. .+
T Consensus 59 ~~~~~Dl~~~~~~---~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~ 135 (255)
T PRK05717 59 WFIAMDVADEAQV---AAGVAEVLGQFGRLDALVCNAAIADPHNTTLESLSLAHWNRVLAVNLTGPMLLAKHCAPYLRAH 135 (255)
T ss_pred EEEEccCCCHHHH---HHHHHHHHHHhCCCCEEEECCCcccCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc
Confidence 8999999963210 0111122 2358999999997532 1346778999999999999998642 23
Q ss_pred CceEEEEecceeecCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcHHHH
Q 010075 154 LKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVF 233 (519)
Q Consensus 154 l~~~V~vSTa~v~~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~Y~~ 233 (519)
..++|++||....... ...+.|+.
T Consensus 136 ~g~ii~~sS~~~~~~~--------------------------------------------------------~~~~~Y~~ 159 (255)
T PRK05717 136 NGAIVNLASTRARQSE--------------------------------------------------------PDTEAYAA 159 (255)
T ss_pred CcEEEEEcchhhcCCC--------------------------------------------------------CCCcchHH
Confidence 3679999987543211 12356999
Q ss_pred HHHHHHHHHHHh----hcCCcEEEEecCccccCCCCCCCcccccccccHHHHHHhhcCCceeeccCCCceeeeeeHHHHH
Q 010075 234 TKTMGEMLMQQS----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVV 309 (519)
Q Consensus 234 sK~~aE~lv~~~----~~~lp~~IvRPs~V~g~~~~p~~gw~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~d~vpVDdva 309 (519)
+|+..|.+++.. ..++++..++||.|.++..... . ...+. ....+.. ....+..++|++
T Consensus 160 sKaa~~~~~~~la~~~~~~i~v~~i~Pg~i~t~~~~~~--~------~~~~~-~~~~~~~--------~~~~~~~~~~va 222 (255)
T PRK05717 160 SKGGLLALTHALAISLGPEIRVNAVSPGWIDARDPSQR--R------AEPLS-EADHAQH--------PAGRVGTVEDVA 222 (255)
T ss_pred HHHHHHHHHHHHHHHhcCCCEEEEEecccCcCCccccc--c------chHHH-HHHhhcC--------CCCCCcCHHHHH
Confidence 999999888765 3469999999999988642110 0 00110 1111100 012356889999
Q ss_pred HHHHHHHHHhccCCCCCcEEEecCC
Q 010075 310 NAMIVAMVAHAKQPSDANIYHVGSS 334 (519)
Q Consensus 310 ~aii~a~~~~~~~~~~~~iyni~s~ 334 (519)
.++..++..... .-.+.++++.++
T Consensus 223 ~~~~~l~~~~~~-~~~g~~~~~~gg 246 (255)
T PRK05717 223 AMVAWLLSRQAG-FVTGQEFVVDGG 246 (255)
T ss_pred HHHHHHcCchhc-CccCcEEEECCC
Confidence 998877753221 113567777665
|
|
| >PRK05653 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated | Back alignment and domain information |
|---|
Probab=99.70 E-value=1.1e-15 Score=148.61 Aligned_cols=219 Identities=17% Similarity=0.191 Sum_probs=145.9
Q ss_pred CCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEE
Q 010075 11 ENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFV 90 (519)
Q Consensus 11 ~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v 90 (519)
.+++|+||||||++|+++++.|++.| .+|+++.|+.... +.+.++ ++. ...++.++
T Consensus 4 ~~~~ilItGasg~iG~~l~~~l~~~g---~~v~~~~r~~~~~---~~~~~~---------~~~---------~~~~~~~~ 59 (246)
T PRK05653 4 QGKTALVTGASRGIGRAIALRLAADG---AKVVIYDSNEEAA---EALAAE---------LRA---------AGGEARVL 59 (246)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCC---CEEEEEeCChhHH---HHHHHH---------HHh---------cCCceEEE
Confidence 46899999999999999999999988 5688888875321 111111 111 12568899
Q ss_pred eccCCCCCCCCChhhhHHHH-------hcCccEEEEcCccCCcc-------ccHHHHHHHhHHHHHHHHHHHHhc---cC
Q 010075 91 PGDISSEDLGLKDSNLKEEL-------WNELDIMVNSAAITKFD-------ERYDVAFGINTLGVIHLVNFAKKC---VK 153 (519)
Q Consensus 91 ~gDl~~~~lgls~~~~~~~l-------~~~vdiViH~Aa~v~f~-------~~~~~~~~~Nv~gt~~ll~~a~~~---~~ 153 (519)
.+|++++. + .... ...+|+|||+||..... +.+...+++|+.++.++++.+... .+
T Consensus 60 ~~D~~~~~------~-~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~ 132 (246)
T PRK05653 60 VFDVSDEA------A-VRALIEAAVEAFGALDILVNNAGITRDALLPRMSEEDWDRVIDVNLTGTFNVVRAALPPMIKAR 132 (246)
T ss_pred EccCCCHH------H-HHHHHHHHHHHhCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC
Confidence 99999642 1 1222 23579999999886432 345677899999999998887431 25
Q ss_pred CceEEEEecceeecCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcHHHH
Q 010075 154 LKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVF 233 (519)
Q Consensus 154 l~~~V~vSTa~v~~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~Y~~ 233 (519)
.++||++||....... .....|+.
T Consensus 133 ~~~ii~~ss~~~~~~~--------------------------------------------------------~~~~~y~~ 156 (246)
T PRK05653 133 YGRIVNISSVSGVTGN--------------------------------------------------------PGQTNYSA 156 (246)
T ss_pred CcEEEEECcHHhccCC--------------------------------------------------------CCCcHhHh
Confidence 6799999987432110 22356999
Q ss_pred HHHHHHHHHHHh-----hcCCcEEEEecCccccCCCCCCCcccccccccHHHHHHhhcCCceeeccCCCceeeeeeHHHH
Q 010075 234 TKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMV 308 (519)
Q Consensus 234 sK~~aE~lv~~~-----~~~lp~~IvRPs~V~g~~~~p~~gw~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~d~vpVDdv 308 (519)
+|...|.+++.. ..+++++++||+.+.++...++ ...+...... ......++.++|+
T Consensus 157 sk~~~~~~~~~l~~~~~~~~i~~~~i~pg~~~~~~~~~~----------~~~~~~~~~~--------~~~~~~~~~~~dv 218 (246)
T PRK05653 157 AKAGVIGFTKALALELASRGITVNAVAPGFIDTDMTEGL----------PEEVKAEILK--------EIPLGRLGQPEEV 218 (246)
T ss_pred HHHHHHHHHHHHHHHHhhcCeEEEEEEeCCcCCcchhhh----------hHHHHHHHHh--------cCCCCCCcCHHHH
Confidence 999888887765 2479999999999988754211 0111111000 0112457888999
Q ss_pred HHHHHHHHHHhccCCCCCcEEEecCCC
Q 010075 309 VNAMIVAMVAHAKQPSDANIYHVGSSL 335 (519)
Q Consensus 309 a~aii~a~~~~~~~~~~~~iyni~s~~ 335 (519)
++++..++..... ...+++|++++|.
T Consensus 219 a~~~~~~~~~~~~-~~~g~~~~~~gg~ 244 (246)
T PRK05653 219 ANAVAFLASDAAS-YITGQVIPVNGGM 244 (246)
T ss_pred HHHHHHHcCchhc-CccCCEEEeCCCe
Confidence 9999998853222 2246899998873
|
|
| >PRK12828 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.70 E-value=9.6e-16 Score=148.59 Aligned_cols=210 Identities=12% Similarity=0.122 Sum_probs=143.4
Q ss_pred cCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 010075 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (519)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (519)
+++|+||||||||+||+.+++.|++.| .+|+++.|+..... +.+. + +. ...+..
T Consensus 5 ~~~k~vlItGatg~iG~~la~~l~~~G---~~v~~~~r~~~~~~--~~~~-~---------~~-----------~~~~~~ 58 (239)
T PRK12828 5 LQGKVVAITGGFGGLGRATAAWLAARG---ARVALIGRGAAPLS--QTLP-G---------VP-----------ADALRI 58 (239)
T ss_pred CCCCEEEEECCCCcHhHHHHHHHHHCC---CeEEEEeCChHhHH--HHHH-H---------Hh-----------hcCceE
Confidence 568999999999999999999999988 57899999653221 1111 0 00 134667
Q ss_pred EeccCCCCCCCCChhhhHHHHh-------cCccEEEEcCccCCc-------cccHHHHHHHhHHHHHHHHHHHHhc---c
Q 010075 90 VPGDISSEDLGLKDSNLKEELW-------NELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKC---V 152 (519)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~-------~~vdiViH~Aa~v~f-------~~~~~~~~~~Nv~gt~~ll~~a~~~---~ 152 (519)
+.+|+.++ +..+.++ .++|+|||+|+.... .+.+...+.+|+.++.++++.+.+. .
T Consensus 59 ~~~D~~~~-------~~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~ 131 (239)
T PRK12828 59 GGIDLVDP-------QAARRAVDEVNRQFGRLDALVNIAGAFVWGTIADGDADTWDRMYGVNVKTTLNASKAALPALTAS 131 (239)
T ss_pred EEeecCCH-------HHHHHHHHHHHHHhCCcCEEEECCcccCcCChhhCCHHHHHHHHHhhchhHHHHHHHHHHHHHhc
Confidence 88999853 2222222 369999999986432 2345677889999999998887532 3
Q ss_pred CCceEEEEecceeecCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcHHH
Q 010075 153 KLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYV 232 (519)
Q Consensus 153 ~l~~~V~vSTa~v~~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~Y~ 232 (519)
+.+++|++||...+... .....|+
T Consensus 132 ~~~~iv~~sS~~~~~~~--------------------------------------------------------~~~~~y~ 155 (239)
T PRK12828 132 GGGRIVNIGAGAALKAG--------------------------------------------------------PGMGAYA 155 (239)
T ss_pred CCCEEEEECchHhccCC--------------------------------------------------------CCcchhH
Confidence 57899999998655321 1124699
Q ss_pred HHHHHHHHHHHHh-----hcCCcEEEEecCccccCCCCCCCcccccccccHHHHHHhhcCCceeeccCCCceeeeeeHHH
Q 010075 233 FTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDM 307 (519)
Q Consensus 233 ~sK~~aE~lv~~~-----~~~lp~~IvRPs~V~g~~~~p~~gw~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~d~vpVDd 307 (519)
.+|+..+.+++.. ..++++.++||+.++++..... . +. .....+++++|
T Consensus 156 ~sk~a~~~~~~~~a~~~~~~~i~~~~i~pg~v~~~~~~~~--------~----------------~~--~~~~~~~~~~d 209 (239)
T PRK12828 156 AAKAGVARLTEALAAELLDRGITVNAVLPSIIDTPPNRAD--------M----------------PD--ADFSRWVTPEQ 209 (239)
T ss_pred HHHHHHHHHHHHHHHHhhhcCeEEEEEecCcccCcchhhc--------C----------------Cc--hhhhcCCCHHH
Confidence 9999888887654 3579999999999988632110 0 00 01122789999
Q ss_pred HHHHHHHHHHHhccCCCCCcEEEecCCC
Q 010075 308 VVNAMIVAMVAHAKQPSDANIYHVGSSL 335 (519)
Q Consensus 308 va~aii~a~~~~~~~~~~~~iyni~s~~ 335 (519)
+|++++.++...... -.++.+++.++.
T Consensus 210 va~~~~~~l~~~~~~-~~g~~~~~~g~~ 236 (239)
T PRK12828 210 IAAVIAFLLSDEAQA-ITGASIPVDGGV 236 (239)
T ss_pred HHHHHHHHhCccccc-ccceEEEecCCE
Confidence 999999888643221 136788887763
|
|
| >PRK06179 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.70 E-value=2.2e-15 Score=149.54 Aligned_cols=159 Identities=13% Similarity=0.204 Sum_probs=119.3
Q ss_pred CCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEE
Q 010075 11 ENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFV 90 (519)
Q Consensus 11 ~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v 90 (519)
.+++|+||||||+||++++++|++.| .+|+++.|+...... ..+++++
T Consensus 3 ~~~~vlVtGasg~iG~~~a~~l~~~g---~~V~~~~r~~~~~~~-----------------------------~~~~~~~ 50 (270)
T PRK06179 3 NSKVALVTGASSGIGRATAEKLARAG---YRVFGTSRNPARAAP-----------------------------IPGVELL 50 (270)
T ss_pred CCCEEEEecCCCHHHHHHHHHHHHCC---CEEEEEeCChhhccc-----------------------------cCCCeeE
Confidence 46899999999999999999999988 678899987432100 2467899
Q ss_pred eccCCCCCCCCChhhhHHHHh-------cCccEEEEcCccCCc-------cccHHHHHHHhHHHHHHHHHHHHhc---cC
Q 010075 91 PGDISSEDLGLKDSNLKEELW-------NELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKC---VK 153 (519)
Q Consensus 91 ~gDl~~~~lgls~~~~~~~l~-------~~vdiViH~Aa~v~f-------~~~~~~~~~~Nv~gt~~ll~~a~~~---~~ 153 (519)
.+|++++ +..+.++ ..+|+|||+||.... .+.++..+++|+.|+.++++.+... .+
T Consensus 51 ~~D~~d~-------~~~~~~~~~~~~~~g~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~ 123 (270)
T PRK06179 51 ELDVTDD-------ASVQAAVDEVIARAGRIDVLVNNAGVGLAGAAEESSIAQAQALFDTNVFGILRMTRAVLPHMRAQG 123 (270)
T ss_pred EeecCCH-------HHHHHHHHHHHHhCCCCCEEEECCCCCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC
Confidence 9999963 2223333 358999999997543 2456788999999999988875321 36
Q ss_pred CceEEEEecceeecCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcHHHH
Q 010075 154 LKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVF 233 (519)
Q Consensus 154 l~~~V~vSTa~v~~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~Y~~ 233 (519)
.+++|++||...+... +....|+.
T Consensus 124 ~~~iv~isS~~~~~~~--------------------------------------------------------~~~~~Y~~ 147 (270)
T PRK06179 124 SGRIINISSVLGFLPA--------------------------------------------------------PYMALYAA 147 (270)
T ss_pred CceEEEECCccccCCC--------------------------------------------------------CCccHHHH
Confidence 7899999997543211 12357999
Q ss_pred HHHHHHHHHHHh-----hcCCcEEEEecCccccCCC
Q 010075 234 TKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYK 264 (519)
Q Consensus 234 sK~~aE~lv~~~-----~~~lp~~IvRPs~V~g~~~ 264 (519)
||+..|.+.+.. ..++++++++||.+.++..
T Consensus 148 sK~a~~~~~~~l~~el~~~gi~v~~v~pg~~~t~~~ 183 (270)
T PRK06179 148 SKHAVEGYSESLDHEVRQFGIRVSLVEPAYTKTNFD 183 (270)
T ss_pred HHHHHHHHHHHHHHHHhhhCcEEEEEeCCCcccccc
Confidence 999999887764 3589999999999988754
|
|
| >PRK12827 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.69 E-value=2.3e-15 Score=146.95 Aligned_cols=220 Identities=13% Similarity=0.104 Sum_probs=144.9
Q ss_pred cCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCc-ccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceE
Q 010075 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADI-DSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKIT 88 (519)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~-~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~ 88 (519)
+++|+|+||||||+||+++++.|++.| .+|+++.|.... ....+.+.+ .+.. ...++.
T Consensus 4 ~~~~~ilItGasg~iG~~la~~l~~~g---~~v~~~~~~~~~~~~~~~~~~~---------~~~~---------~~~~~~ 62 (249)
T PRK12827 4 LDSRRVLITGGSGGLGRAIAVRLAADG---ADVIVLDIHPMRGRAEADAVAA---------GIEA---------AGGKAL 62 (249)
T ss_pred cCCCEEEEECCCChHHHHHHHHHHHCC---CeEEEEcCcccccHHHHHHHHH---------HHHh---------cCCcEE
Confidence 467999999999999999999999988 567777764322 211111111 1111 124688
Q ss_pred EEeccCCCCCCCCChhhhHHHHh-------cCccEEEEcCccCCc-------cccHHHHHHHhHHHHHHHHHHHH-hc--
Q 010075 89 FVPGDISSEDLGLKDSNLKEELW-------NELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAK-KC-- 151 (519)
Q Consensus 89 ~v~gDl~~~~lgls~~~~~~~l~-------~~vdiViH~Aa~v~f-------~~~~~~~~~~Nv~gt~~ll~~a~-~~-- 151 (519)
++.+|+++++ ..+.++ .++|+|||+||.... .+.+...+++|+.|+.++++++. .+
T Consensus 63 ~~~~Dl~~~~-------~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~ 135 (249)
T PRK12827 63 GLAFDVRDFA-------ATRAALDAGVEEFGRLDILVNNAGIATDAAFAELSIEEWDDVIDVNLDGFFNVTQAALPPMIR 135 (249)
T ss_pred EEEccCCCHH-------HHHHHHHHHHHHhCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHh
Confidence 9999999632 222222 469999999997642 13466778999999999999987 21
Q ss_pred -cCCceEEEEecceeecCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcH
Q 010075 152 -VKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNT 230 (519)
Q Consensus 152 -~~l~~~V~vSTa~v~~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~ 230 (519)
.+.+++|++||...+... .....
T Consensus 136 ~~~~~~iv~~sS~~~~~~~--------------------------------------------------------~~~~~ 159 (249)
T PRK12827 136 ARRGGRIVNIASVAGVRGN--------------------------------------------------------RGQVN 159 (249)
T ss_pred cCCCeEEEEECCchhcCCC--------------------------------------------------------CCCch
Confidence 255789999997654321 12346
Q ss_pred HHHHHHHHHHHHHHh-----hcCCcEEEEecCccccCCCCCCCcccccccccHHHHHHhhcCCceeeccCCCceeeeeeH
Q 010075 231 YVFTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPV 305 (519)
Q Consensus 231 Y~~sK~~aE~lv~~~-----~~~lp~~IvRPs~V~g~~~~p~~gw~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~d~vpV 305 (519)
|+.+|+..+.+++.. ..+++++++|||.|.++...... +...+. .. .....+.++
T Consensus 160 y~~sK~a~~~~~~~l~~~~~~~~i~~~~i~pg~v~t~~~~~~~--------~~~~~~---~~---------~~~~~~~~~ 219 (249)
T PRK12827 160 YAASKAGLIGLTKTLANELAPRGITVNAVAPGAINTPMADNAA--------PTEHLL---NP---------VPVQRLGEP 219 (249)
T ss_pred hHHHHHHHHHHHHHHHHHhhhhCcEEEEEEECCcCCCcccccc--------hHHHHH---hh---------CCCcCCcCH
Confidence 999999988887755 24799999999999987542110 000010 00 011124588
Q ss_pred HHHHHHHHHHHHHhccCCCCCcEEEecCC
Q 010075 306 DMVVNAMIVAMVAHAKQPSDANIYHVGSS 334 (519)
Q Consensus 306 Ddva~aii~a~~~~~~~~~~~~iyni~s~ 334 (519)
+|++++++.++.... ....++++++.+|
T Consensus 220 ~~va~~~~~l~~~~~-~~~~g~~~~~~~g 247 (249)
T PRK12827 220 DEVAALVAFLVSDAA-SYVTGQVIPVDGG 247 (249)
T ss_pred HHHHHHHHHHcCccc-CCccCcEEEeCCC
Confidence 999999888875322 2223678888765
|
|
| >PRK12384 sorbitol-6-phosphate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.69 E-value=6.4e-16 Score=152.34 Aligned_cols=229 Identities=11% Similarity=0.073 Sum_probs=145.3
Q ss_pred CCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEEe
Q 010075 12 NKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVP 91 (519)
Q Consensus 12 ~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v~ 91 (519)
+|+|+||||+|+||+++++.|++.| .+|+++.|+.... +.+. +.++...+ ..++.++.
T Consensus 2 ~k~ilItG~~~~IG~~la~~l~~~g---~~vi~~~r~~~~~---~~~~---------~~~~~~~~-------~~~~~~~~ 59 (259)
T PRK12384 2 NQVAVVIGGGQTLGAFLCHGLAEEG---YRVAVADINSEKA---ANVA---------QEINAEYG-------EGMAYGFG 59 (259)
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCC---CEEEEEECCHHHH---HHHH---------HHHHHhcC-------CceeEEEE
Confidence 6899999999999999999999988 5778888864321 1111 11111111 13588999
Q ss_pred ccCCCCCCCCChhhhHHHH-------hcCccEEEEcCccCCc-------cccHHHHHHHhHHHHHHHHHHHHhc---cC-
Q 010075 92 GDISSEDLGLKDSNLKEEL-------WNELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKC---VK- 153 (519)
Q Consensus 92 gDl~~~~lgls~~~~~~~l-------~~~vdiViH~Aa~v~f-------~~~~~~~~~~Nv~gt~~ll~~a~~~---~~- 153 (519)
+|++++. + ...+ ...+|+|||+||.... .+.++..+++|+.|+..+++.+.+. ++
T Consensus 60 ~D~~~~~------~-i~~~~~~~~~~~~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~ 132 (259)
T PRK12384 60 ADATSEQ------S-VLALSRGVDEIFGRVDLLVYNAGIAKAAFITDFQLGDFDRSLQVNLVGYFLCAREFSRLMIRDGI 132 (259)
T ss_pred ccCCCHH------H-HHHHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhCCC
Confidence 9999632 2 2222 2468999999987532 1456778899999998888776542 23
Q ss_pred CceEEEEeccee-ecCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcHHH
Q 010075 154 LKVFVHVSTAYV-AGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYV 232 (519)
Q Consensus 154 l~~~V~vSTa~v-~~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~Y~ 232 (519)
..++|++||... ++. .....|+
T Consensus 133 ~~~iv~~ss~~~~~~~---------------------------------------------------------~~~~~Y~ 155 (259)
T PRK12384 133 QGRIIQINSKSGKVGS---------------------------------------------------------KHNSGYS 155 (259)
T ss_pred CcEEEEecCcccccCC---------------------------------------------------------CCCchhH
Confidence 358999988542 111 1234699
Q ss_pred HHHHHHHHHHHHh-----hcCCcEEEEecCccccCCCCCCCcccccccccHHHHHHhh--cCCceeeccCCCceeeeeeH
Q 010075 233 FTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASA--QGNLRCLVGETKVIMDVIPV 305 (519)
Q Consensus 233 ~sK~~aE~lv~~~-----~~~lp~~IvRPs~V~g~~~~p~~gw~~~~~~~~~~i~~~~--~g~~~~~~~~~~~~~d~vpV 305 (519)
.||+..+.+++.+ ..++++.++|||.++++.... +. ...+..... .+.......++.....+++.
T Consensus 156 ~sKaa~~~l~~~la~e~~~~gi~v~~v~pg~~~~~~~~~--~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (259)
T PRK12384 156 AAKFGGVGLTQSLALDLAEYGITVHSLMLGNLLKSPMFQ--SL------LPQYAKKLGIKPDEVEQYYIDKVPLKRGCDY 227 (259)
T ss_pred HHHHHHHHHHHHHHHHHHHcCcEEEEEecCCcccchhhh--hh------hHHHHHhcCCChHHHHHHHHHhCcccCCCCH
Confidence 9999988887654 467999999999887653210 00 001110000 00001112223345677899
Q ss_pred HHHHHHHHHHHHHhccCCCCCcEEEecCCC
Q 010075 306 DMVVNAMIVAMVAHAKQPSDANIYHVGSSL 335 (519)
Q Consensus 306 Ddva~aii~a~~~~~~~~~~~~iyni~s~~ 335 (519)
+|++++++.++.... ..-.+++||+.+|.
T Consensus 228 ~dv~~~~~~l~~~~~-~~~~G~~~~v~~g~ 256 (259)
T PRK12384 228 QDVLNMLLFYASPKA-SYCTGQSINVTGGQ 256 (259)
T ss_pred HHHHHHHHHHcCccc-ccccCceEEEcCCE
Confidence 999999998875322 21236889998874
|
|
| >PRK09186 flagellin modification protein A; Provisional | Back alignment and domain information |
|---|
Probab=99.69 E-value=7.6e-16 Score=151.34 Aligned_cols=228 Identities=16% Similarity=0.170 Sum_probs=142.0
Q ss_pred hcCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceE
Q 010075 9 FLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKIT 88 (519)
Q Consensus 9 ~~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~ 88 (519)
++++|+|+||||||+||+++++.|++.| .+|+++.|+.... +.+. +.++...+ ...+.
T Consensus 1 ~~~~k~vlItGas~giG~~~a~~l~~~g---~~v~~~~r~~~~~---~~~~---------~~l~~~~~-------~~~~~ 58 (256)
T PRK09186 1 MLKGKTILITGAGGLIGSALVKAILEAG---GIVIAADIDKEAL---NELL---------ESLGKEFK-------SKKLS 58 (256)
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHHCC---CEEEEEecChHHH---HHHH---------HHHHhhcC-------CCcee
Confidence 3578999999999999999999999988 5778888764321 1111 11111111 24567
Q ss_pred EEeccCCCCCCCCChhhhHHHHh-------cCccEEEEcCccCC------c----cccHHHHHHHhHHHHHHHHHHHHhc
Q 010075 89 FVPGDISSEDLGLKDSNLKEELW-------NELDIMVNSAAITK------F----DERYDVAFGINTLGVIHLVNFAKKC 151 (519)
Q Consensus 89 ~v~gDl~~~~lgls~~~~~~~l~-------~~vdiViH~Aa~v~------f----~~~~~~~~~~Nv~gt~~ll~~a~~~ 151 (519)
++.+|+++++ ....++ ..+|+|||+|+... + .+.+...+++|+.++..+++.+.+.
T Consensus 59 ~~~~Dl~d~~-------~~~~~~~~~~~~~~~id~vi~~A~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~ 131 (256)
T PRK09186 59 LVELDITDQE-------SLEEFLSKSAEKYGKIDGAVNCAYPRNKDYGKKFFDVSLDDFNENLSLHLGSSFLFSQQFAKY 131 (256)
T ss_pred EEEecCCCHH-------HHHHHHHHHHHHcCCccEEEECCccccccccCccccCCHHHHHHHHHHhhhhHHHHHHHHHHH
Confidence 7899999642 222333 34899999997532 1 1346677889998887776655431
Q ss_pred ---cCCceEEEEecceeecCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCC
Q 010075 152 ---VKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWP 228 (519)
Q Consensus 152 ---~~l~~~V~vSTa~v~~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~ 228 (519)
.+.+++|++||.+........ .+.+ .+ ...+
T Consensus 132 ~~~~~~~~iv~~sS~~~~~~~~~~----~~~~-~~-----------------------------------------~~~~ 165 (256)
T PRK09186 132 FKKQGGGNLVNISSIYGVVAPKFE----IYEG-TS-----------------------------------------MTSP 165 (256)
T ss_pred HHhcCCceEEEEechhhhccccch----hccc-cc-----------------------------------------cCCc
Confidence 255799999997654322100 0100 00 0223
Q ss_pred cHHHHHHHHHHHHHHHh-----hcCCcEEEEecCccccCCCCCCCcccccccccHHHHHHhhcCCceeeccCCCceeeee
Q 010075 229 NTYVFTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVI 303 (519)
Q Consensus 229 n~Y~~sK~~aE~lv~~~-----~~~lp~~IvRPs~V~g~~~~p~~gw~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~d~v 303 (519)
..|+.||+..|.+.+.. ..++.+++++|+.+.+... ..+..... .. . ....++
T Consensus 166 ~~Y~~sK~a~~~l~~~la~e~~~~~i~v~~i~Pg~~~~~~~-------------~~~~~~~~-~~---~-----~~~~~~ 223 (256)
T PRK09186 166 VEYAAIKAGIIHLTKYLAKYFKDSNIRVNCVSPGGILDNQP-------------EAFLNAYK-KC---C-----NGKGML 223 (256)
T ss_pred chhHHHHHHHHHHHHHHHHHhCcCCeEEEEEecccccCCCC-------------HHHHHHHH-hc---C-----CccCCC
Confidence 47999999999988644 3579999999998765321 01111111 10 0 112468
Q ss_pred eHHHHHHHHHHHHHHhccCCCCCcEEEecCC
Q 010075 304 PVDMVVNAMIVAMVAHAKQPSDANIYHVGSS 334 (519)
Q Consensus 304 pVDdva~aii~a~~~~~~~~~~~~iyni~s~ 334 (519)
+++|+|++++.++..... ...+.++++.+|
T Consensus 224 ~~~dva~~~~~l~~~~~~-~~~g~~~~~~~g 253 (256)
T PRK09186 224 DPDDICGTLVFLLSDQSK-YITGQNIIVDDG 253 (256)
T ss_pred CHHHhhhhHhheeccccc-cccCceEEecCC
Confidence 999999999998864322 223567777766
|
|
| >PRK05993 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.69 E-value=1.1e-15 Score=152.41 Aligned_cols=162 Identities=15% Similarity=0.185 Sum_probs=115.2
Q ss_pred CCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEEe
Q 010075 12 NKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVP 91 (519)
Q Consensus 12 ~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v~ 91 (519)
+|+|+||||||+||++++++|++.| .+|+++.|+... .+++. ..+++++.
T Consensus 4 ~k~vlItGasggiG~~la~~l~~~G---~~Vi~~~r~~~~---~~~l~------------------------~~~~~~~~ 53 (277)
T PRK05993 4 KRSILITGCSSGIGAYCARALQSDG---WRVFATCRKEED---VAALE------------------------AEGLEAFQ 53 (277)
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCC---CEEEEEECCHHH---HHHHH------------------------HCCceEEE
Confidence 6799999999999999999999988 678999887422 11221 13577899
Q ss_pred ccCCCCCCCCChhhhHHHHh----cCccEEEEcCccCCc-------cccHHHHHHHhHHH----HHHHHHHHHhccCCce
Q 010075 92 GDISSEDLGLKDSNLKEELW----NELDIMVNSAAITKF-------DERYDVAFGINTLG----VIHLVNFAKKCVKLKV 156 (519)
Q Consensus 92 gDl~~~~lgls~~~~~~~l~----~~vdiViH~Aa~v~f-------~~~~~~~~~~Nv~g----t~~ll~~a~~~~~l~~ 156 (519)
+|++++.. -....+.+. .++|+|||+||.... .+.++..+++|+.| ++.+++.+++. +..+
T Consensus 54 ~Dl~d~~~---~~~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~l~~~~~~-~~g~ 129 (277)
T PRK05993 54 LDYAEPES---IAALVAQVLELSGGRLDALFNNGAYGQPGAVEDLPTEALRAQFEANFFGWHDLTRRVIPVMRKQ-GQGR 129 (277)
T ss_pred ccCCCHHH---HHHHHHHHHHHcCCCccEEEECCCcCCCCCcccCCHHHHHHHHhHHhHHHHHHHHHHHHHHhhc-CCCE
Confidence 99996321 011111111 368999999987532 13466789999999 55666666653 5678
Q ss_pred EEEEecceeecCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcHHHHHHH
Q 010075 157 FVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKT 236 (519)
Q Consensus 157 ~V~vSTa~v~~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~Y~~sK~ 236 (519)
+|++||.+.+... .....|+.||+
T Consensus 130 iv~isS~~~~~~~--------------------------------------------------------~~~~~Y~asK~ 153 (277)
T PRK05993 130 IVQCSSILGLVPM--------------------------------------------------------KYRGAYNASKF 153 (277)
T ss_pred EEEECChhhcCCC--------------------------------------------------------CccchHHHHHH
Confidence 9999996543210 22457999999
Q ss_pred HHHHHHHHh-----hcCCcEEEEecCccccCC
Q 010075 237 MGEMLMQQS-----KENLSLVIIRPTVVSGTY 263 (519)
Q Consensus 237 ~aE~lv~~~-----~~~lp~~IvRPs~V~g~~ 263 (519)
..|.+++.. ..++.+++++||.|-.+.
T Consensus 154 a~~~~~~~l~~el~~~gi~v~~v~Pg~v~T~~ 185 (277)
T PRK05993 154 AIEGLSLTLRMELQGSGIHVSLIEPGPIETRF 185 (277)
T ss_pred HHHHHHHHHHHHhhhhCCEEEEEecCCccCch
Confidence 999988754 458999999999987654
|
|
| >PRK06194 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=99.68 E-value=1.8e-15 Score=151.46 Aligned_cols=166 Identities=17% Similarity=0.167 Sum_probs=113.8
Q ss_pred cCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 010075 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (519)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (519)
+++++||||||+||||++++++|++.| .+|+++.|.... .++..+++ ... ..++.+
T Consensus 4 ~~~k~vlVtGasggIG~~la~~l~~~G---~~V~~~~r~~~~---~~~~~~~~---------~~~---------~~~~~~ 59 (287)
T PRK06194 4 FAGKVAVITGAASGFGLAFARIGAALG---MKLVLADVQQDA---LDRAVAEL---------RAQ---------GAEVLG 59 (287)
T ss_pred CCCCEEEEeCCccHHHHHHHHHHHHCC---CEEEEEeCChHH---HHHHHHHH---------Hhc---------CCeEEE
Confidence 568999999999999999999999988 578888885422 12221111 100 246788
Q ss_pred EeccCCCCCCCCChhhhHHHHhc-------CccEEEEcCccCCc----c---ccHHHHHHHhHHHHHHHHHHHH----hc
Q 010075 90 VPGDISSEDLGLKDSNLKEELWN-------ELDIMVNSAAITKF----D---ERYDVAFGINTLGVIHLVNFAK----KC 151 (519)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~~-------~vdiViH~Aa~v~f----~---~~~~~~~~~Nv~gt~~ll~~a~----~~ 151 (519)
+.+|++++ +..+.+.+ ++|+|||+||.... + +.++..+++|+.|+.++.+++. +.
T Consensus 60 ~~~D~~d~-------~~~~~~~~~~~~~~g~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~ 132 (287)
T PRK06194 60 VRTDVSDA-------AQVEALADAALERFGAVHLLFNNAGVGAGGLVWENSLADWEWVLGVNLWGVIHGVRAFTPLMLAA 132 (287)
T ss_pred EECCCCCH-------HHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhccHHHHHHHHHHHHHHHhc
Confidence 99999963 22233333 58999999998643 1 4456678999999999777643 22
Q ss_pred cC-----CceEEEEecceeecCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCC
Q 010075 152 VK-----LKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHG 226 (519)
Q Consensus 152 ~~-----l~~~V~vSTa~v~~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~ 226 (519)
.. ..++|++||...+... .
T Consensus 133 ~~~~~~~~g~iv~~sS~~~~~~~--------------------------------------------------------~ 156 (287)
T PRK06194 133 AEKDPAYEGHIVNTASMAGLLAP--------------------------------------------------------P 156 (287)
T ss_pred CCCCCCCCeEEEEeCChhhccCC--------------------------------------------------------C
Confidence 11 1589999998665321 1
Q ss_pred CCcHHHHHHHHHHHHHHHhh-------cCCcEEEEecCccccC
Q 010075 227 WPNTYVFTKTMGEMLMQQSK-------ENLSLVIIRPTVVSGT 262 (519)
Q Consensus 227 ~~n~Y~~sK~~aE~lv~~~~-------~~lp~~IvRPs~V~g~ 262 (519)
....|+.||+..|.+++.+. .++.+..+.|+.|...
T Consensus 157 ~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~irv~~v~pg~i~t~ 199 (287)
T PRK06194 157 AMGIYNVSKHAVVSLTETLYQDLSLVTDQVGASVLCPYFVPTG 199 (287)
T ss_pred CCcchHHHHHHHHHHHHHHHHHHhhcCCCeEEEEEEeCcccCc
Confidence 23569999999999987651 2366677777766544
|
|
| >PRK05557 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated | Back alignment and domain information |
|---|
Probab=99.68 E-value=3.2e-15 Score=145.63 Aligned_cols=220 Identities=16% Similarity=0.179 Sum_probs=143.2
Q ss_pred cCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 010075 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (519)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (519)
+++++|+||||||++|+++++.|++.| .+|+++.|+.... .+.+. +.++.. ..++.+
T Consensus 3 ~~~~~vlItG~sg~iG~~l~~~l~~~G---~~v~~~~~~~~~~--~~~~~---------~~~~~~---------~~~~~~ 59 (248)
T PRK05557 3 LEGKVALVTGASRGIGRAIAERLAAQG---ANVVINYASSEAG--AEALV---------AEIGAL---------GGKALA 59 (248)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCC---CEEEEEeCCchhH--HHHHH---------HHHHhc---------CCceEE
Confidence 367899999999999999999999988 5777888764321 11111 111111 256889
Q ss_pred EeccCCCCCCCCChhhhHHHHh-------cCccEEEEcCccCCc-------cccHHHHHHHhHHHHHHHHHHHHhc---c
Q 010075 90 VPGDISSEDLGLKDSNLKEELW-------NELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKC---V 152 (519)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~-------~~vdiViH~Aa~v~f-------~~~~~~~~~~Nv~gt~~ll~~a~~~---~ 152 (519)
+.+|+++++ + ...++ .++|+|||+|+.... .+.+...+.+|+.++.++++.+... .
T Consensus 60 ~~~Dl~~~~------~-~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~ 132 (248)
T PRK05557 60 VQGDVSDAE------S-VERAVDEAKAEFGGVDILVNNAGITRDNLLMRMKEEDWDRVIDTNLTGVFNLTKAVARPMMKQ 132 (248)
T ss_pred EEcCCCCHH------H-HHHHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc
Confidence 999999632 2 22222 368999999997532 1356677899999999999888653 2
Q ss_pred CCceEEEEecceeecCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcHHH
Q 010075 153 KLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYV 232 (519)
Q Consensus 153 ~l~~~V~vSTa~v~~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~Y~ 232 (519)
+.++||++||....... .....|+
T Consensus 133 ~~~~~v~iss~~~~~~~--------------------------------------------------------~~~~~y~ 156 (248)
T PRK05557 133 RSGRIINISSVVGLMGN--------------------------------------------------------PGQANYA 156 (248)
T ss_pred CCeEEEEEcccccCcCC--------------------------------------------------------CCCchhH
Confidence 45689999987432111 1235699
Q ss_pred HHHHHHHHHHHHh-----hcCCcEEEEecCccccCCCCCCCcccccccccHHHHHHhhcCCceeeccCCCceeeeeeHHH
Q 010075 233 FTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDM 307 (519)
Q Consensus 233 ~sK~~aE~lv~~~-----~~~lp~~IvRPs~V~g~~~~p~~gw~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~d~vpVDd 307 (519)
.+|+..|.+++.+ ..+++++++||+.+.++...+. ..........+. ....+++++|
T Consensus 157 ~sk~a~~~~~~~~a~~~~~~~i~~~~v~pg~~~~~~~~~~---------~~~~~~~~~~~~---------~~~~~~~~~~ 218 (248)
T PRK05557 157 ASKAGVIGFTKSLARELASRGITVNAVAPGFIETDMTDAL---------PEDVKEAILAQI---------PLGRLGQPEE 218 (248)
T ss_pred HHHHHHHHHHHHHHHHhhhhCeEEEEEecCccCCcccccc---------ChHHHHHHHhcC---------CCCCCcCHHH
Confidence 9999998877654 3479999999998865433221 111111111111 1123578899
Q ss_pred HHHHHHHHHHHhccCCCCCcEEEecCC
Q 010075 308 VVNAMIVAMVAHAKQPSDANIYHVGSS 334 (519)
Q Consensus 308 va~aii~a~~~~~~~~~~~~iyni~s~ 334 (519)
+++++..++... .....+++|++++|
T Consensus 219 va~~~~~l~~~~-~~~~~g~~~~i~~~ 244 (248)
T PRK05557 219 IASAVAFLASDE-AAYITGQTLHVNGG 244 (248)
T ss_pred HHHHHHHHcCcc-cCCccccEEEecCC
Confidence 999998877532 22224689999876
|
|
| >PRK07074 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.68 E-value=1.9e-15 Score=148.71 Aligned_cols=227 Identities=14% Similarity=0.113 Sum_probs=149.0
Q ss_pred CCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEEe
Q 010075 12 NKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVP 91 (519)
Q Consensus 12 ~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v~ 91 (519)
+++++||||||+||+.+++.|++.| .+|+++.|+... .+.+.+++ ...++.++.
T Consensus 2 ~k~ilItGat~~iG~~la~~L~~~g---~~v~~~~r~~~~---~~~~~~~~--------------------~~~~~~~~~ 55 (257)
T PRK07074 2 KRTALVTGAAGGIGQALARRFLAAG---DRVLALDIDAAA---LAAFADAL--------------------GDARFVPVA 55 (257)
T ss_pred CCEEEEECCcchHHHHHHHHHHHCC---CEEEEEeCCHHH---HHHHHHHh--------------------cCCceEEEE
Confidence 5789999999999999999999988 578899886422 12221111 024688999
Q ss_pred ccCCCCCCCCChhhhHHHHh-------cCccEEEEcCccCCc-------cccHHHHHHHhHHHHHHHHHHHHh-c--cCC
Q 010075 92 GDISSEDLGLKDSNLKEELW-------NELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKK-C--VKL 154 (519)
Q Consensus 92 gDl~~~~lgls~~~~~~~l~-------~~vdiViH~Aa~v~f-------~~~~~~~~~~Nv~gt~~ll~~a~~-~--~~l 154 (519)
+|+.++ +....++ .++|+|||+|+.... .+.+...+.+|+.|+.++++.+.. + .+.
T Consensus 56 ~D~~~~-------~~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~ 128 (257)
T PRK07074 56 CDLTDA-------ASLAAALANAAAERGPVDVLVANAGAARAASLHDTTPASWRADNALNLEAAYLCVEAVLEGMLKRSR 128 (257)
T ss_pred ecCCCH-------HHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCC
Confidence 999963 2222222 358999999997542 133456678999999999888732 1 245
Q ss_pred ceEEEEecceeecCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcHHHHH
Q 010075 155 KVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFT 234 (519)
Q Consensus 155 ~~~V~vSTa~v~~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~Y~~s 234 (519)
.++|++||....... + ...|+.+
T Consensus 129 ~~iv~~sS~~~~~~~--------------------------------------------------------~-~~~y~~s 151 (257)
T PRK07074 129 GAVVNIGSVNGMAAL--------------------------------------------------------G-HPAYSAA 151 (257)
T ss_pred eEEEEEcchhhcCCC--------------------------------------------------------C-CcccHHH
Confidence 789999996432110 1 1259999
Q ss_pred HHHHHHHHHHh-----hcCCcEEEEecCccccCCCCCCCcccccccccHHHHHHhhcCCceeeccCCCceeeeeeHHHHH
Q 010075 235 KTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVV 309 (519)
Q Consensus 235 K~~aE~lv~~~-----~~~lp~~IvRPs~V~g~~~~p~~gw~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~d~vpVDdva 309 (519)
|+..|.+++.+ ..++++.++|||.+.++..... ......+...... .....++++++|++
T Consensus 152 K~a~~~~~~~~a~~~~~~gi~v~~v~pg~v~t~~~~~~------~~~~~~~~~~~~~---------~~~~~~~~~~~d~a 216 (257)
T PRK07074 152 KAGLIHYTKLLAVEYGRFGIRANAVAPGTVKTQAWEAR------VAANPQVFEELKK---------WYPLQDFATPDDVA 216 (257)
T ss_pred HHHHHHHHHHHHHHHhHhCeEEEEEEeCcCCcchhhcc------cccChHHHHHHHh---------cCCCCCCCCHHHHH
Confidence 99999888765 3479999999999877642110 0001111111111 12235789999999
Q ss_pred HHHHHHHHHhccCCCCCcEEEecCCCCCchhHHHH
Q 010075 310 NAMIVAMVAHAKQPSDANIYHVGSSLRNPVTLGLQ 344 (519)
Q Consensus 310 ~aii~a~~~~~~~~~~~~iyni~s~~~~~i~~~~~ 344 (519)
++++.++.... ....+.++++.+|...+++.++.
T Consensus 217 ~~~~~l~~~~~-~~~~g~~~~~~~g~~~~~~~~~~ 250 (257)
T PRK07074 217 NAVLFLASPAA-RAITGVCLPVDGGLTAGNREMAR 250 (257)
T ss_pred HHHHHHcCchh-cCcCCcEEEeCCCcCcCChhhhh
Confidence 99999985322 22236788898887666554433
|
|
| >PRK07060 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.68 E-value=1.7e-15 Score=147.72 Aligned_cols=216 Identities=14% Similarity=0.159 Sum_probs=146.1
Q ss_pred cCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 010075 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (519)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (519)
+++++++||||+|++|+++++.|++.| .+|+++.|+... .+.+. +. .+..+
T Consensus 7 ~~~~~~lItGa~g~iG~~~a~~l~~~g---~~V~~~~r~~~~---~~~~~-------------~~----------~~~~~ 57 (245)
T PRK07060 7 FSGKSVLVTGASSGIGRACAVALAQRG---ARVVAAARNAAA---LDRLA-------------GE----------TGCEP 57 (245)
T ss_pred cCCCEEEEeCCcchHHHHHHHHHHHCC---CEEEEEeCCHHH---HHHHH-------------HH----------hCCeE
Confidence 578999999999999999999999988 578888886421 11111 10 13467
Q ss_pred EeccCCCCCCCCChhhhHHHHh---cCccEEEEcCccCCcc-------ccHHHHHHHhHHHHHHHHHHHHhc--c--CCc
Q 010075 90 VPGDISSEDLGLKDSNLKEELW---NELDIMVNSAAITKFD-------ERYDVAFGINTLGVIHLVNFAKKC--V--KLK 155 (519)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~---~~vdiViH~Aa~v~f~-------~~~~~~~~~Nv~gt~~ll~~a~~~--~--~l~ 155 (519)
+.+|++++ +....+. ..+|+|||+|+..... +.++..+.+|+.++.++++.+.+. + ...
T Consensus 58 ~~~D~~~~-------~~v~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ 130 (245)
T PRK07060 58 LRLDVGDD-------AAIRAALAAAGAFDGLVNCAGIASLESALDMTAEGFDRVMAVNARGAALVARHVARAMIAAGRGG 130 (245)
T ss_pred EEecCCCH-------HHHHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCc
Confidence 88999853 2222333 3589999999975431 456777889999999999888653 1 136
Q ss_pred eEEEEecceeecCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcHHHHHH
Q 010075 156 VFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTK 235 (519)
Q Consensus 156 ~~V~vSTa~v~~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~Y~~sK 235 (519)
+||++||...+... .....|+.+|
T Consensus 131 ~iv~~sS~~~~~~~--------------------------------------------------------~~~~~y~~sK 154 (245)
T PRK07060 131 SIVNVSSQAALVGL--------------------------------------------------------PDHLAYCASK 154 (245)
T ss_pred EEEEEccHHHcCCC--------------------------------------------------------CCCcHhHHHH
Confidence 89999997654321 1235799999
Q ss_pred HHHHHHHHHh-----hcCCcEEEEecCccccCCCCCCCcccccccccHHHHHHhhcCCceeeccCCCceeeeeeHHHHHH
Q 010075 236 TMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVN 310 (519)
Q Consensus 236 ~~aE~lv~~~-----~~~lp~~IvRPs~V~g~~~~p~~gw~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~d~vpVDdva~ 310 (519)
+..|.+++.+ ..+++++.+||+.+.++.... -|.+ .. ........ .....+++++|+++
T Consensus 155 ~a~~~~~~~~a~~~~~~~i~v~~v~pg~v~~~~~~~--~~~~----~~-~~~~~~~~---------~~~~~~~~~~d~a~ 218 (245)
T PRK07060 155 AALDAITRVLCVELGPHGIRVNSVNPTVTLTPMAAE--AWSD----PQ-KSGPMLAA---------IPLGRFAEVDDVAA 218 (245)
T ss_pred HHHHHHHHHHHHHHhhhCeEEEEEeeCCCCCchhhh--hccC----HH-HHHHHHhc---------CCCCCCCCHHHHHH
Confidence 9999988765 247999999999998875321 0111 00 00111110 11234789999999
Q ss_pred HHHHHHHHhccCCCCCcEEEecCC
Q 010075 311 AMIVAMVAHAKQPSDANIYHVGSS 334 (519)
Q Consensus 311 aii~a~~~~~~~~~~~~iyni~s~ 334 (519)
++..++.... ....++++++.+|
T Consensus 219 ~~~~l~~~~~-~~~~G~~~~~~~g 241 (245)
T PRK07060 219 PILFLLSDAA-SMVSGVSLPVDGG 241 (245)
T ss_pred HHHHHcCccc-CCccCcEEeECCC
Confidence 9999886432 2234788888776
|
|
| >PRK07231 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.67 E-value=2.8e-15 Score=146.66 Aligned_cols=222 Identities=17% Similarity=0.128 Sum_probs=145.6
Q ss_pred cCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 010075 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (519)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (519)
+++++|+||||||++|+++++.|++.| .+|+++.|+.... +.+.+ .+.. ..++.+
T Consensus 3 ~~~~~vlItGasg~iG~~l~~~l~~~G---~~V~~~~r~~~~~---~~~~~---------~~~~----------~~~~~~ 57 (251)
T PRK07231 3 LEGKVAIVTGASSGIGEGIARRFAAEG---ARVVVTDRNEEAA---ERVAA---------EILA----------GGRAIA 57 (251)
T ss_pred cCCcEEEEECCCChHHHHHHHHHHHCC---CEEEEEeCCHHHH---HHHHH---------HHhc----------CCeEEE
Confidence 468999999999999999999999988 5789999986322 11111 1110 145789
Q ss_pred EeccCCCCCCCCChhhhHHHHh-------cCccEEEEcCccCCc--------cccHHHHHHHhHHHHHHHHHHHHhc---
Q 010075 90 VPGDISSEDLGLKDSNLKEELW-------NELDIMVNSAAITKF--------DERYDVAFGINTLGVIHLVNFAKKC--- 151 (519)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~-------~~vdiViH~Aa~v~f--------~~~~~~~~~~Nv~gt~~ll~~a~~~--- 151 (519)
+.+|++++ +....++ .++|+|||+|+.... .+.++..+++|+.|+..+++.+...
T Consensus 58 ~~~D~~~~-------~~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~ 130 (251)
T PRK07231 58 VAADVSDE-------ADVEAAVAAALERFGSVDILVNNAGTTHRNGPLLDVDEAEFDRIFAVNVKSPYLWTQAAVPAMRG 130 (251)
T ss_pred EECCCCCH-------HHHHHHHHHHHHHhCCCCEEEECCCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHh
Confidence 99999963 2222333 368999999997421 2456778999999988887776532
Q ss_pred cCCceEEEEecceeecCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcHH
Q 010075 152 VKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTY 231 (519)
Q Consensus 152 ~~l~~~V~vSTa~v~~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~Y 231 (519)
.+.++||++||...+... .....|
T Consensus 131 ~~~~~iv~~sS~~~~~~~--------------------------------------------------------~~~~~y 154 (251)
T PRK07231 131 EGGGAIVNVASTAGLRPR--------------------------------------------------------PGLGWY 154 (251)
T ss_pred cCCcEEEEEcChhhcCCC--------------------------------------------------------CCchHH
Confidence 356789999998665422 123469
Q ss_pred HHHHHHHHHHHHHh-----hcCCcEEEEecCccccCCCCCCCcccccccccHHHHHHhhcCCceeeccCCCceeeeeeHH
Q 010075 232 VFTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVD 306 (519)
Q Consensus 232 ~~sK~~aE~lv~~~-----~~~lp~~IvRPs~V~g~~~~p~~gw~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~d~vpVD 306 (519)
+.+|+..+.+++.+ ..+++++.++||.+.++...... .. . .......... ......+++++
T Consensus 155 ~~sk~~~~~~~~~~a~~~~~~~i~v~~i~pg~~~t~~~~~~~---~~-~-~~~~~~~~~~---------~~~~~~~~~~~ 220 (251)
T PRK07231 155 NASKGAVITLTKALAAELGPDKIRVNAVAPVVVETGLLEAFM---GE-P-TPENRAKFLA---------TIPLGRLGTPE 220 (251)
T ss_pred HHHHHHHHHHHHHHHHHhhhhCeEEEEEEECccCCCcchhhh---cc-c-ChHHHHHHhc---------CCCCCCCcCHH
Confidence 99999888877654 23899999999999665432110 00 0 0011111111 11223468999
Q ss_pred HHHHHHHHHHHHhccCCCCCcEEEecCC
Q 010075 307 MVVNAMIVAMVAHAKQPSDANIYHVGSS 334 (519)
Q Consensus 307 dva~aii~a~~~~~~~~~~~~iyni~s~ 334 (519)
|+|.+++.++..... ...+.++++.+|
T Consensus 221 dva~~~~~l~~~~~~-~~~g~~~~~~gg 247 (251)
T PRK07231 221 DIANAALFLASDEAS-WITGVTLVVDGG 247 (251)
T ss_pred HHHHHHHHHhCcccc-CCCCCeEEECCC
Confidence 999999998853322 223567777665
|
|
| >PRK06123 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.67 E-value=7.1e-15 Score=143.70 Aligned_cols=220 Identities=16% Similarity=0.111 Sum_probs=137.7
Q ss_pred CCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEEe
Q 010075 12 NKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVP 91 (519)
Q Consensus 12 ~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v~ 91 (519)
+++++||||||+||++++++|++.|. +|++..|.... ..+.+. +.++.. ..++.++.
T Consensus 2 ~~~~lVtG~~~~iG~~~a~~l~~~G~---~vv~~~~~~~~--~~~~~~---------~~l~~~---------~~~~~~~~ 58 (248)
T PRK06123 2 RKVMIITGASRGIGAATALLAAERGY---AVCLNYLRNRD--AAEAVV---------QAIRRQ---------GGEALAVA 58 (248)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCC---eEEEecCCCHH--HHHHHH---------HHHHhC---------CCcEEEEE
Confidence 47899999999999999999999883 55555433211 111111 111111 24577899
Q ss_pred ccCCCCCCCCChhhhHHHHh-------cCccEEEEcCccCCc--------cccHHHHHHHhHHHHHHHHHHHHhc-c---
Q 010075 92 GDISSEDLGLKDSNLKEELW-------NELDIMVNSAAITKF--------DERYDVAFGINTLGVIHLVNFAKKC-V--- 152 (519)
Q Consensus 92 gDl~~~~lgls~~~~~~~l~-------~~vdiViH~Aa~v~f--------~~~~~~~~~~Nv~gt~~ll~~a~~~-~--- 152 (519)
+|++++ +....++ ..+|+|||+|+.... .+.++..+++|+.|+..+++.+.+. .
T Consensus 59 ~Dl~~~-------~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~ 131 (248)
T PRK06123 59 ADVADE-------ADVLRLFEAVDRELGRLDALVNNAGILEAQMRLEQMDAARLTRIFATNVVGSFLCAREAVKRMSTRH 131 (248)
T ss_pred eccCCH-------HHHHHHHHHHHHHhCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC
Confidence 999963 2222332 368999999997531 1356678999999999988877542 1
Q ss_pred --CCceEEEEecceeecCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcH
Q 010075 153 --KLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNT 230 (519)
Q Consensus 153 --~l~~~V~vSTa~v~~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~ 230 (519)
.-.++|++||........ .....
T Consensus 132 ~~~~g~iv~~sS~~~~~~~~-------------------------------------------------------~~~~~ 156 (248)
T PRK06123 132 GGRGGAIVNVSSMAARLGSP-------------------------------------------------------GEYID 156 (248)
T ss_pred CCCCeEEEEECchhhcCCCC-------------------------------------------------------CCccc
Confidence 124699999975432110 11135
Q ss_pred HHHHHHHHHHHHHHh-----hcCCcEEEEecCccccCCCCCCCcccccccccHHHHHHhhcCCceeeccCCCceeeeeeH
Q 010075 231 YVFTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPV 305 (519)
Q Consensus 231 Y~~sK~~aE~lv~~~-----~~~lp~~IvRPs~V~g~~~~p~~gw~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~d~vpV 305 (519)
|+.+|+..|.+++.+ ..+++++++||+.|+++..... .....+........ ..-...+
T Consensus 157 Y~~sKaa~~~~~~~la~~~~~~~i~v~~i~pg~v~~~~~~~~--------~~~~~~~~~~~~~p---------~~~~~~~ 219 (248)
T PRK06123 157 YAASKGAIDTMTIGLAKEVAAEGIRVNAVRPGVIYTEIHASG--------GEPGRVDRVKAGIP---------MGRGGTA 219 (248)
T ss_pred hHHHHHHHHHHHHHHHHHhcccCeEEEEEecCcccCchhhcc--------CCHHHHHHHHhcCC---------CCCCcCH
Confidence 999999999988755 3479999999999998753210 01111111111110 0012367
Q ss_pred HHHHHHHHHHHHHhccCCCCCcEEEecCC
Q 010075 306 DMVVNAMIVAMVAHAKQPSDANIYHVGSS 334 (519)
Q Consensus 306 Ddva~aii~a~~~~~~~~~~~~iyni~s~ 334 (519)
+|++++++.++..... ...+++|++.++
T Consensus 220 ~d~a~~~~~l~~~~~~-~~~g~~~~~~gg 247 (248)
T PRK06123 220 EEVARAILWLLSDEAS-YTTGTFIDVSGG 247 (248)
T ss_pred HHHHHHHHHHhCcccc-CccCCEEeecCC
Confidence 9999999988754221 123678998765
|
|
| >PRK06701 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.67 E-value=4.4e-15 Score=149.30 Aligned_cols=224 Identities=14% Similarity=0.120 Sum_probs=149.5
Q ss_pred hhcCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCce
Q 010075 8 EFLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKI 87 (519)
Q Consensus 8 ~~~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v 87 (519)
..+++|+|+||||+|+||.++++.|++.| .+|++..|+... ..+.+.+. +.. . ..++
T Consensus 42 ~~~~~k~iLItGasggIG~~la~~l~~~G---~~V~l~~r~~~~--~~~~~~~~---------~~~-~--------~~~~ 98 (290)
T PRK06701 42 GKLKGKVALITGGDSGIGRAVAVLFAKEG---ADIAIVYLDEHE--DANETKQR---------VEK-E--------GVKC 98 (290)
T ss_pred cCCCCCEEEEeCCCcHHHHHHHHHHHHCC---CEEEEEeCCcch--HHHHHHHH---------HHh-c--------CCeE
Confidence 34678999999999999999999999988 577888886432 11111111 110 0 2467
Q ss_pred EEEeccCCCCCCCCChhhhHHHHh-------cCccEEEEcCccCCc--------cccHHHHHHHhHHHHHHHHHHHHhc-
Q 010075 88 TFVPGDISSEDLGLKDSNLKEELW-------NELDIMVNSAAITKF--------DERYDVAFGINTLGVIHLVNFAKKC- 151 (519)
Q Consensus 88 ~~v~gDl~~~~lgls~~~~~~~l~-------~~vdiViH~Aa~v~f--------~~~~~~~~~~Nv~gt~~ll~~a~~~- 151 (519)
.++.+|++++ +..+.++ .++|+|||+|+.... .+.+...+++|+.|+.++++.+.+.
T Consensus 99 ~~~~~Dl~~~-------~~~~~~~~~i~~~~~~iD~lI~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~a~~~~~ 171 (290)
T PRK06701 99 LLIPGDVSDE-------AFCKDAVEETVRELGRLDILVNNAAFQYPQQSLEDITAEQLDKTFKTNIYSYFHMTKAALPHL 171 (290)
T ss_pred EEEEccCCCH-------HHHHHHHHHHHHHcCCCCEEEECCcccCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHH
Confidence 8999999963 2222332 368999999997422 1345778999999999999998753
Q ss_pred cCCceEEEEecceeecCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcHH
Q 010075 152 VKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTY 231 (519)
Q Consensus 152 ~~l~~~V~vSTa~v~~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~Y 231 (519)
....++|++||...+.... ....|
T Consensus 172 ~~~g~iV~isS~~~~~~~~--------------------------------------------------------~~~~Y 195 (290)
T PRK06701 172 KQGSAIINTGSITGYEGNE--------------------------------------------------------TLIDY 195 (290)
T ss_pred hhCCeEEEEecccccCCCC--------------------------------------------------------Ccchh
Confidence 2336899999987654221 12469
Q ss_pred HHHHHHHHHHHHHh-----hcCCcEEEEecCccccCCCCCCCcccccccccHHHHHHhhcCCceeeccCCCceeeeeeHH
Q 010075 232 VFTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVD 306 (519)
Q Consensus 232 ~~sK~~aE~lv~~~-----~~~lp~~IvRPs~V~g~~~~p~~gw~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~d~vpVD 306 (519)
+.+|+..+.+++.+ ..+++++.++||.|..+.... . .....+.... .......+..++
T Consensus 196 ~~sK~a~~~l~~~la~~~~~~gIrv~~i~pG~v~T~~~~~---~-----~~~~~~~~~~---------~~~~~~~~~~~~ 258 (290)
T PRK06701 196 SATKGAIHAFTRSLAQSLVQKGIRVNAVAPGPIWTPLIPS---D-----FDEEKVSQFG---------SNTPMQRPGQPE 258 (290)
T ss_pred HHHHHHHHHHHHHHHHHhhhcCeEEEEEecCCCCCccccc---c-----cCHHHHHHHH---------hcCCcCCCcCHH
Confidence 99999999888766 247999999999988764311 0 0011111111 112234578899
Q ss_pred HHHHHHHHHHHHhccCCCCCcEEEecCCC
Q 010075 307 MVVNAMIVAMVAHAKQPSDANIYHVGSSL 335 (519)
Q Consensus 307 dva~aii~a~~~~~~~~~~~~iyni~s~~ 335 (519)
|+|++++.++..... .-.+.++++.+|.
T Consensus 259 dva~~~~~ll~~~~~-~~~G~~i~idgg~ 286 (290)
T PRK06701 259 ELAPAYVFLASPDSS-YITGQMLHVNGGV 286 (290)
T ss_pred HHHHHHHHHcCcccC-CccCcEEEeCCCc
Confidence 999999998864322 1236788887764
|
|
| >PRK08219 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.67 E-value=2.8e-15 Score=144.36 Aligned_cols=202 Identities=15% Similarity=0.168 Sum_probs=132.1
Q ss_pred CCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEEe
Q 010075 12 NKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVP 91 (519)
Q Consensus 12 ~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v~ 91 (519)
.|+++||||||++|+++++.|++. .+|+++.|+... .+.+. ++ ...++++.
T Consensus 3 ~~~vlVtG~~g~iG~~l~~~l~~~----~~V~~~~r~~~~---~~~~~-------------~~---------~~~~~~~~ 53 (227)
T PRK08219 3 RPTALITGASRGIGAAIARELAPT----HTLLLGGRPAER---LDELA-------------AE---------LPGATPFP 53 (227)
T ss_pred CCEEEEecCCcHHHHHHHHHHHhh----CCEEEEeCCHHH---HHHHH-------------HH---------hccceEEe
Confidence 478999999999999999999986 467899987422 11111 00 13478899
Q ss_pred ccCCCCCCCCChhhhHHHHhc---CccEEEEcCccCCcc-------ccHHHHHHHhHHHHHHH----HHHHHhccCCceE
Q 010075 92 GDISSEDLGLKDSNLKEELWN---ELDIMVNSAAITKFD-------ERYDVAFGINTLGVIHL----VNFAKKCVKLKVF 157 (519)
Q Consensus 92 gDl~~~~lgls~~~~~~~l~~---~vdiViH~Aa~v~f~-------~~~~~~~~~Nv~gt~~l----l~~a~~~~~l~~~ 157 (519)
+|+++ .+....+++ ++|+|||+|+..... +.+...+.+|+.+..++ ++.+++ ..+++
T Consensus 54 ~D~~~-------~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~--~~~~~ 124 (227)
T PRK08219 54 VDLTD-------PEAIAAAVEQLGRLDVLVHNAGVADLGPVAESTVDEWRATLEVNVVAPAELTRLLLPALRA--AHGHV 124 (227)
T ss_pred cCCCC-------HHHHHHHHHhcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHh--CCCeE
Confidence 99995 233334444 599999999975421 34566788999985554 444443 34689
Q ss_pred EEEecceeecCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcHHHHHHHH
Q 010075 158 VHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTM 237 (519)
Q Consensus 158 V~vSTa~v~~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~Y~~sK~~ 237 (519)
|++||...+... .....|+.+|..
T Consensus 125 v~~ss~~~~~~~--------------------------------------------------------~~~~~y~~~K~a 148 (227)
T PRK08219 125 VFINSGAGLRAN--------------------------------------------------------PGWGSYAASKFA 148 (227)
T ss_pred EEEcchHhcCcC--------------------------------------------------------CCCchHHHHHHH
Confidence 999988654321 123469999999
Q ss_pred HHHHHHHh---hcC-CcEEEEecCccccCCCCCCCcccccccccHHHHHHhhcCCceeeccCCCceeeeeeHHHHHHHHH
Q 010075 238 GEMLMQQS---KEN-LSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMI 313 (519)
Q Consensus 238 aE~lv~~~---~~~-lp~~IvRPs~V~g~~~~p~~gw~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~d~vpVDdva~aii 313 (519)
.|.+++.. ... +++..++|+.+.++.... +... .+ .......+++++|++++++
T Consensus 149 ~~~~~~~~~~~~~~~i~~~~i~pg~~~~~~~~~-------------~~~~--~~-------~~~~~~~~~~~~dva~~~~ 206 (227)
T PRK08219 149 LRALADALREEEPGNVRVTSVHPGRTDTDMQRG-------------LVAQ--EG-------GEYDPERYLRPETVAKAVR 206 (227)
T ss_pred HHHHHHHHHHHhcCCceEEEEecCCccchHhhh-------------hhhh--hc-------cccCCCCCCCHHHHHHHHH
Confidence 99887754 234 888899988765432110 0000 01 0111245799999999999
Q ss_pred HHHHHhccCCCCCcEEEecC
Q 010075 314 VAMVAHAKQPSDANIYHVGS 333 (519)
Q Consensus 314 ~a~~~~~~~~~~~~iyni~s 333 (519)
.++.... .+.+|++.-
T Consensus 207 ~~l~~~~----~~~~~~~~~ 222 (227)
T PRK08219 207 FAVDAPP----DAHITEVVV 222 (227)
T ss_pred HHHcCCC----CCccceEEE
Confidence 9986322 256777653
|
|
| >PRK06500 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.67 E-value=4.4e-15 Score=145.20 Aligned_cols=212 Identities=14% Similarity=0.118 Sum_probs=134.2
Q ss_pred cCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 010075 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (519)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (519)
+++|+|+||||+|+||++++++|++.| .+|+++.|+... .+.+. ++. ..++.+
T Consensus 4 ~~~k~vlItGasg~iG~~la~~l~~~g---~~v~~~~r~~~~---~~~~~-------------~~~--------~~~~~~ 56 (249)
T PRK06500 4 LQGKTALITGGTSGIGLETARQFLAEG---ARVAITGRDPAS---LEAAR-------------AEL--------GESALV 56 (249)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCC---CEEEEecCCHHH---HHHHH-------------HHh--------CCceEE
Confidence 468999999999999999999999988 578888886321 11111 111 246788
Q ss_pred EeccCCCCCCCCChhhhHHHHhcCccEEEEcCccCCcc-------ccHHHHHHHhHHHHHHHHHHHHhc-cCCceEEEEe
Q 010075 90 VPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKFD-------ERYDVAFGINTLGVIHLVNFAKKC-VKLKVFVHVS 161 (519)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~~~vdiViH~Aa~v~f~-------~~~~~~~~~Nv~gt~~ll~~a~~~-~~l~~~V~vS 161 (519)
+.+|++++..-....+.......++|+|||+||...+. +.++..+++|+.|+.++++.+.+. ....++|++|
T Consensus 57 ~~~D~~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~i~~~ 136 (249)
T PRK06500 57 IRADAGDVAAQKALAQALAEAFGRLDAVFINAGVAKFAPLEDWDEAMFDRSFNTNVKGPYFLIQALLPLLANPASIVLNG 136 (249)
T ss_pred EEecCCCHHHHHHHHHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCEEEEEe
Confidence 99999963210000001112224689999999975431 456778999999999999999752 2335677777
Q ss_pred cce-eecCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcHHHHHHHHHHH
Q 010075 162 TAY-VAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEM 240 (519)
Q Consensus 162 Ta~-v~~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~Y~~sK~~aE~ 240 (519)
|.. .++. +..+.|+.+|+..|.
T Consensus 137 S~~~~~~~---------------------------------------------------------~~~~~Y~~sK~a~~~ 159 (249)
T PRK06500 137 SINAHIGM---------------------------------------------------------PNSSVYAASKAALLS 159 (249)
T ss_pred chHhccCC---------------------------------------------------------CCccHHHHHHHHHHH
Confidence 643 2221 123579999999999
Q ss_pred HHHHh-----hcCCcEEEEecCccccCCCCCCCcccccccccHHHHHHhhcCCceeeccCCCceeeeeeHHHHHHHHHHH
Q 010075 241 LMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMIVA 315 (519)
Q Consensus 241 lv~~~-----~~~lp~~IvRPs~V~g~~~~p~~gw~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~d~vpVDdva~aii~a 315 (519)
+++.+ ..++++.++||+.+.++...... ... .....+......+.. ..-+.+++|+|+++..+
T Consensus 160 ~~~~la~e~~~~gi~v~~i~pg~~~t~~~~~~~--~~~-~~~~~~~~~~~~~~~---------~~~~~~~~~va~~~~~l 227 (249)
T PRK06500 160 LAKTLSGELLPRGIRVNAVSPGPVQTPLYGKLG--LPE-ATLDAVAAQIQALVP---------LGRFGTPEEIAKAVLYL 227 (249)
T ss_pred HHHHHHHHhhhcCeEEEEEeeCcCCCHHHHhhc--cCc-cchHHHHHHHHhcCC---------CCCCcCHHHHHHHHHHH
Confidence 99654 34899999999999886431110 000 001111111111111 01135789999999988
Q ss_pred HH
Q 010075 316 MV 317 (519)
Q Consensus 316 ~~ 317 (519)
+.
T Consensus 228 ~~ 229 (249)
T PRK06500 228 AS 229 (249)
T ss_pred cC
Confidence 75
|
|
| >PRK08213 gluconate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.66 E-value=8.8e-15 Score=144.27 Aligned_cols=227 Identities=17% Similarity=0.126 Sum_probs=142.9
Q ss_pred cCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 010075 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (519)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (519)
+++|+||||||+|+||.++++.|++.| .+|+++.|+... .+.+.++ ++. ...++.+
T Consensus 10 ~~~k~ilItGa~g~IG~~la~~l~~~G---~~V~~~~r~~~~---~~~~~~~---------i~~---------~~~~~~~ 65 (259)
T PRK08213 10 LSGKTALVTGGSRGLGLQIAEALGEAG---ARVVLSARKAEE---LEEAAAH---------LEA---------LGIDALW 65 (259)
T ss_pred cCCCEEEEECCCchHHHHHHHHHHHcC---CEEEEEeCCHHH---HHHHHHH---------HHh---------cCCeEEE
Confidence 478999999999999999999999988 578888886422 1111111 111 0246788
Q ss_pred EeccCCCCCCCCChhhhHHHH---hcCccEEEEcCccCCc-------cccHHHHHHHhHHHHHHHHHHHHhc----cCCc
Q 010075 90 VPGDISSEDLGLKDSNLKEEL---WNELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKC----VKLK 155 (519)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l---~~~vdiViH~Aa~v~f-------~~~~~~~~~~Nv~gt~~ll~~a~~~----~~l~ 155 (519)
+.+|+++++. -.+..+.+ ...+|+|||+|+.... .+.++..+++|+.|+.++++.+.+. ++..
T Consensus 66 ~~~Dl~d~~~---i~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~l~~~~~~ 142 (259)
T PRK08213 66 IAADVADEAD---IERLAEETLERFGHVDILVNNAGATWGAPAEDHPVEAWDKVMNLNVRGLFLLSQAVAKRSMIPRGYG 142 (259)
T ss_pred EEccCCCHHH---HHHHHHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHhHHhHHHHHHHHHHHHHHHHhcCCe
Confidence 9999996421 00011111 2368999999996421 2456677899999999999987653 2557
Q ss_pred eEEEEecceeecCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcHHHHHH
Q 010075 156 VFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTK 235 (519)
Q Consensus 156 ~~V~vSTa~v~~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~Y~~sK 235 (519)
+||++||...+....+. ......|+.+|
T Consensus 143 ~~v~~sS~~~~~~~~~~----------------------------------------------------~~~~~~Y~~sK 170 (259)
T PRK08213 143 RIINVASVAGLGGNPPE----------------------------------------------------VMDTIAYNTSK 170 (259)
T ss_pred EEEEECChhhccCCCcc----------------------------------------------------ccCcchHHHHH
Confidence 89999997554321100 01235799999
Q ss_pred HHHHHHHHHh-----hcCCcEEEEecCccccCCCCCCCcccccccccHHHHHHhhcCCceeeccCCCceeeeeeHHHHHH
Q 010075 236 TMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVN 310 (519)
Q Consensus 236 ~~aE~lv~~~-----~~~lp~~IvRPs~V~g~~~~p~~gw~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~d~vpVDdva~ 310 (519)
+..|.+++.+ ..++++.+++|+.+-++..... ...+......+.. ..-+...+++++
T Consensus 171 a~~~~~~~~~a~~~~~~gi~v~~v~Pg~~~t~~~~~~---------~~~~~~~~~~~~~---------~~~~~~~~~va~ 232 (259)
T PRK08213 171 GAVINFTRALAAEWGPHGIRVNAIAPGFFPTKMTRGT---------LERLGEDLLAHTP---------LGRLGDDEDLKG 232 (259)
T ss_pred HHHHHHHHHHHHHhcccCEEEEEEecCcCCCcchhhh---------hHHHHHHHHhcCC---------CCCCcCHHHHHH
Confidence 9999998865 3479999999988865432111 1111212111111 112335788998
Q ss_pred HHHHHHHHhccCCCCCcEEEecCC
Q 010075 311 AMIVAMVAHAKQPSDANIYHVGSS 334 (519)
Q Consensus 311 aii~a~~~~~~~~~~~~iyni~s~ 334 (519)
++..++.... ..-.+.++++..+
T Consensus 233 ~~~~l~~~~~-~~~~G~~~~~~~~ 255 (259)
T PRK08213 233 AALLLASDAS-KHITGQILAVDGG 255 (259)
T ss_pred HHHHHhCccc-cCccCCEEEECCC
Confidence 8877775322 2223677777665
|
|
| >TIGR01832 kduD 2-deoxy-D-gluconate 3-dehydrogenase | Back alignment and domain information |
|---|
Probab=99.66 E-value=4.3e-15 Score=145.39 Aligned_cols=226 Identities=13% Similarity=0.095 Sum_probs=144.1
Q ss_pred cCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 010075 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (519)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (519)
++||+|+||||+|+||++++++|++.| .+|+++.|+.. ....+.+. + ...++.+
T Consensus 3 ~~~k~vlItGas~gIG~~ia~~l~~~G---~~vi~~~r~~~-~~~~~~~~-------------~---------~~~~~~~ 56 (248)
T TIGR01832 3 LEGKVALVTGANTGLGQGIAVGLAEAG---ADIVGAGRSEP-SETQQQVE-------------A---------LGRRFLS 56 (248)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCC---CEEEEEcCchH-HHHHHHHH-------------h---------cCCceEE
Confidence 578999999999999999999999988 57888888642 11111111 0 1246889
Q ss_pred EeccCCCCCCCCChhhhHHHHhcCccEEEEcCccCCc-------cccHHHHHHHhHHHHHHHHHHHHhc---cC-CceEE
Q 010075 90 VPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKC---VK-LKVFV 158 (519)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~~~vdiViH~Aa~v~f-------~~~~~~~~~~Nv~gt~~ll~~a~~~---~~-l~~~V 158 (519)
+.+|+++++-.....+.......++|+|||+||.... .+.++..+++|+.++..+++.+.+. ++ ..++|
T Consensus 57 ~~~D~~~~~~~~~~~~~~~~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv 136 (248)
T TIGR01832 57 LTADLSDIEAIKALVDSAVEEFGHIDILVNNAGIIRRADAEEFSEKDWDDVMNVNLKSVFFLTQAAAKHFLKQGRGGKII 136 (248)
T ss_pred EECCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCeEEE
Confidence 9999996421000000011112469999999997532 2456778999999999999887532 12 46899
Q ss_pred EEecceeecCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcHHHHHHHHH
Q 010075 159 HVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMG 238 (519)
Q Consensus 159 ~vSTa~v~~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~Y~~sK~~a 238 (519)
++||...+... .....|+.+|+..
T Consensus 137 ~~sS~~~~~~~--------------------------------------------------------~~~~~Y~~sKaa~ 160 (248)
T TIGR01832 137 NIASMLSFQGG--------------------------------------------------------IRVPSYTASKHGV 160 (248)
T ss_pred EEecHHhccCC--------------------------------------------------------CCCchhHHHHHHH
Confidence 99998655321 1234699999999
Q ss_pred HHHHHHh-----hcCCcEEEEecCccccCCCCCCCcccccccccHHHHHHhhcCCceeeccCCCceeeeeeHHHHHHHHH
Q 010075 239 EMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMI 313 (519)
Q Consensus 239 E~lv~~~-----~~~lp~~IvRPs~V~g~~~~p~~gw~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~d~vpVDdva~aii 313 (519)
+.+++.. ..++.+++++||.|..+....... ......... . .. ....++..+|+|++++
T Consensus 161 ~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~-------~~~~~~~~~-~---~~-----~~~~~~~~~dva~~~~ 224 (248)
T TIGR01832 161 AGLTKLLANEWAAKGINVNAIAPGYMATNNTQALRA-------DEDRNAAIL-E---RI-----PAGRWGTPDDIGGPAV 224 (248)
T ss_pred HHHHHHHHHHhCccCcEEEEEEECcCcCcchhcccc-------ChHHHHHHH-h---cC-----CCCCCcCHHHHHHHHH
Confidence 9888765 347999999999997764321110 000000000 1 11 1235788999999999
Q ss_pred HHHHHhccCCCCCcEEEecCC
Q 010075 314 VAMVAHAKQPSDANIYHVGSS 334 (519)
Q Consensus 314 ~a~~~~~~~~~~~~iyni~s~ 334 (519)
.++..... .-.+.++.+.+|
T Consensus 225 ~l~s~~~~-~~~G~~i~~dgg 244 (248)
T TIGR01832 225 FLASSASD-YVNGYTLAVDGG 244 (248)
T ss_pred HHcCcccc-CcCCcEEEeCCC
Confidence 88853222 112455555444
|
This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation. |
| >PRK12939 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.66 E-value=6.4e-15 Score=144.03 Aligned_cols=220 Identities=15% Similarity=0.163 Sum_probs=146.3
Q ss_pred cCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 010075 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (519)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (519)
+++|+|+||||+|+||+++++.|++.| .+|+++.|+.... +.+.+ .++.. ..++.+
T Consensus 5 ~~~~~vlItGa~g~iG~~la~~l~~~G---~~v~~~~r~~~~~---~~~~~---------~~~~~---------~~~~~~ 60 (250)
T PRK12939 5 LAGKRALVTGAARGLGAAFAEALAEAG---ATVAFNDGLAAEA---RELAA---------ALEAA---------GGRAHA 60 (250)
T ss_pred CCCCEEEEeCCCChHHHHHHHHHHHcC---CEEEEEeCCHHHH---HHHHH---------HHHhc---------CCcEEE
Confidence 568999999999999999999999988 5678887764221 11111 11110 246889
Q ss_pred EeccCCCCCCCCChhhhHHHHh-------cCccEEEEcCccCCc-------cccHHHHHHHhHHHHHHHHHHHHhc---c
Q 010075 90 VPGDISSEDLGLKDSNLKEELW-------NELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKC---V 152 (519)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~-------~~vdiViH~Aa~v~f-------~~~~~~~~~~Nv~gt~~ll~~a~~~---~ 152 (519)
+.+|++++ +..+.++ .++|+|||+|+.... .+.++..+++|+.|+.++++.+.+. .
T Consensus 61 ~~~Dl~~~-------~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~ 133 (250)
T PRK12939 61 IAADLADP-------ASVQRFFDAAAAALGGLDGLVNNAGITNSKSATELDIDTWDAVMNVNVRGTFLMLRAALPHLRDS 133 (250)
T ss_pred EEccCCCH-------HHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc
Confidence 99999963 2222333 469999999997532 2456777899999999999887542 1
Q ss_pred CCceEEEEecceeecCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcHHH
Q 010075 153 KLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYV 232 (519)
Q Consensus 153 ~l~~~V~vSTa~v~~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~Y~ 232 (519)
+..+||++||....... .....|+
T Consensus 134 ~~g~iv~isS~~~~~~~--------------------------------------------------------~~~~~y~ 157 (250)
T PRK12939 134 GRGRIVNLASDTALWGA--------------------------------------------------------PKLGAYV 157 (250)
T ss_pred CCeEEEEECchhhccCC--------------------------------------------------------CCcchHH
Confidence 34589999996543211 1124699
Q ss_pred HHHHHHHHHHHHh-----hcCCcEEEEecCccccCCCCCCCcccccccccHHHHHHhhcCCceeeccCCCceeeeeeHHH
Q 010075 233 FTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDM 307 (519)
Q Consensus 233 ~sK~~aE~lv~~~-----~~~lp~~IvRPs~V~g~~~~p~~gw~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~d~vpVDd 307 (519)
.+|+..|.+++.. ..++++..++||.+.++.....+. ......... ......+++++|
T Consensus 158 ~sK~~~~~~~~~l~~~~~~~~i~v~~v~pg~v~t~~~~~~~~--------~~~~~~~~~---------~~~~~~~~~~~d 220 (250)
T PRK12939 158 ASKGAVIGMTRSLARELGGRGITVNAIAPGLTATEATAYVPA--------DERHAYYLK---------GRALERLQVPDD 220 (250)
T ss_pred HHHHHHHHHHHHHHHHHhhhCEEEEEEEECCCCCccccccCC--------hHHHHHHHh---------cCCCCCCCCHHH
Confidence 9999999988764 357999999999887654321110 011111111 112344688999
Q ss_pred HHHHHHHHHHHhccCCCCCcEEEecCC
Q 010075 308 VVNAMIVAMVAHAKQPSDANIYHVGSS 334 (519)
Q Consensus 308 va~aii~a~~~~~~~~~~~~iyni~s~ 334 (519)
++++++.++.... ..-.++++++.+|
T Consensus 221 va~~~~~l~~~~~-~~~~G~~i~~~gg 246 (250)
T PRK12939 221 VAGAVLFLLSDAA-RFVTGQLLPVNGG 246 (250)
T ss_pred HHHHHHHHhCccc-cCccCcEEEECCC
Confidence 9999999886432 1223678888776
|
|
| >PRK06841 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.65 E-value=5.8e-15 Score=145.04 Aligned_cols=217 Identities=15% Similarity=0.139 Sum_probs=144.3
Q ss_pred cCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 010075 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (519)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (519)
+++|+|+||||+|+||.++++.|++.| .+|+++.|+.... .+..+ . ...++.+
T Consensus 13 ~~~k~vlItGas~~IG~~la~~l~~~G---~~Vi~~~r~~~~~----~~~~~-------------~-------~~~~~~~ 65 (255)
T PRK06841 13 LSGKVAVVTGGASGIGHAIAELFAAKG---ARVALLDRSEDVA----EVAAQ-------------L-------LGGNAKG 65 (255)
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHCC---CEEEEEeCCHHHH----HHHHH-------------h-------hCCceEE
Confidence 468999999999999999999999988 5788888865321 11100 0 0245678
Q ss_pred EeccCCCCCCCCChhhhHHHHh-------cCccEEEEcCccCCc-------cccHHHHHHHhHHHHHHHHHHHHhc---c
Q 010075 90 VPGDISSEDLGLKDSNLKEELW-------NELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKC---V 152 (519)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~-------~~vdiViH~Aa~v~f-------~~~~~~~~~~Nv~gt~~ll~~a~~~---~ 152 (519)
+.+|++++. + .+.++ .++|+|||+||.... .+.++..+++|+.|+.++++.+.+. .
T Consensus 66 ~~~Dl~~~~------~-~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~ 138 (255)
T PRK06841 66 LVCDVSDSQ------S-VEAAVAAVISAFGRIDILVNSAGVALLAPAEDVSEEDWDKTIDINLKGSFLMAQAVGRHMIAA 138 (255)
T ss_pred EEecCCCHH------H-HHHHHHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhcHHHHHHHHHHHHHHHhc
Confidence 999999632 2 22222 368999999997643 1356678999999999999987642 2
Q ss_pred CCceEEEEecceeecCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcHHH
Q 010075 153 KLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYV 232 (519)
Q Consensus 153 ~l~~~V~vSTa~v~~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~Y~ 232 (519)
+..+||++||....... .....|+
T Consensus 139 ~~~~iv~~sS~~~~~~~--------------------------------------------------------~~~~~Y~ 162 (255)
T PRK06841 139 GGGKIVNLASQAGVVAL--------------------------------------------------------ERHVAYC 162 (255)
T ss_pred CCceEEEEcchhhccCC--------------------------------------------------------CCCchHH
Confidence 45789999997542111 1234699
Q ss_pred HHHHHHHHHHHHh-----hcCCcEEEEecCccccCCCCCCCcccccccccHHHHHHhhcCCceeeccCCCceeeeeeHHH
Q 010075 233 FTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDM 307 (519)
Q Consensus 233 ~sK~~aE~lv~~~-----~~~lp~~IvRPs~V~g~~~~p~~gw~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~d~vpVDd 307 (519)
.+|+..+.+++.. ..++.+..++||.|..+.... .|.. ........+ .....+.+.+|
T Consensus 163 ~sK~a~~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~--~~~~------~~~~~~~~~---------~~~~~~~~~~~ 225 (255)
T PRK06841 163 ASKAGVVGMTKVLALEWGPYGITVNAISPTVVLTELGKK--AWAG------EKGERAKKL---------IPAGRFAYPEE 225 (255)
T ss_pred HHHHHHHHHHHHHHHHHHhhCeEEEEEEeCcCcCccccc--ccch------hHHHHHHhc---------CCCCCCcCHHH
Confidence 9999988887654 347999999999987764311 1100 001111111 11234688999
Q ss_pred HHHHHHHHHHHhccCCCCCcEEEecCC
Q 010075 308 VVNAMIVAMVAHAKQPSDANIYHVGSS 334 (519)
Q Consensus 308 va~aii~a~~~~~~~~~~~~iyni~s~ 334 (519)
+|++++.++..... .-.++++++.+|
T Consensus 226 va~~~~~l~~~~~~-~~~G~~i~~dgg 251 (255)
T PRK06841 226 IAAAALFLASDAAA-MITGENLVIDGG 251 (255)
T ss_pred HHHHHHHHcCcccc-CccCCEEEECCC
Confidence 99999998864322 223678888766
|
|
| >PRK06523 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.65 E-value=4.5e-15 Score=146.34 Aligned_cols=232 Identities=14% Similarity=0.131 Sum_probs=143.9
Q ss_pred cCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 010075 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (519)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (519)
++||+|+||||||+||++++++|++.| .+|+++.|+.... ...++.+
T Consensus 7 ~~~k~vlItGas~gIG~~ia~~l~~~G---~~v~~~~r~~~~~------------------------------~~~~~~~ 53 (260)
T PRK06523 7 LAGKRALVTGGTKGIGAATVARLLEAG---ARVVTTARSRPDD------------------------------LPEGVEF 53 (260)
T ss_pred CCCCEEEEECCCCchhHHHHHHHHHCC---CEEEEEeCChhhh------------------------------cCCceeE
Confidence 679999999999999999999999988 5789998874211 0246788
Q ss_pred EeccCCCCCCCCChhhhHHHHhcCccEEEEcCccCC-----c----cccHHHHHHHhHHHHHHHHHHHHh-c--cCCceE
Q 010075 90 VPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITK-----F----DERYDVAFGINTLGVIHLVNFAKK-C--VKLKVF 157 (519)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~~~vdiViH~Aa~v~-----f----~~~~~~~~~~Nv~gt~~ll~~a~~-~--~~l~~~ 157 (519)
+.+|+++++-.....+.......++|+|||+||... + .+.++..+++|+.|+..+.+.+.. + .+..++
T Consensus 54 ~~~D~~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~i 133 (260)
T PRK06523 54 VAADLTTAEGCAAVARAVLERLGGVDILVHVLGGSSAPAGGFAALTDEEWQDELNLNLLAAVRLDRALLPGMIARGSGVI 133 (260)
T ss_pred EecCCCCHHHHHHHHHHHHHHcCCCCEEEECCcccccCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCcEE
Confidence 999999632100000011122346899999999532 1 245777899999999888765532 1 244689
Q ss_pred EEEecceeecCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcHHHHHHHH
Q 010075 158 VHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTM 237 (519)
Q Consensus 158 V~vSTa~v~~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~Y~~sK~~ 237 (519)
|++||........ .....|+.+|+.
T Consensus 134 i~isS~~~~~~~~-------------------------------------------------------~~~~~Y~~sK~a 158 (260)
T PRK06523 134 IHVTSIQRRLPLP-------------------------------------------------------ESTTAYAAAKAA 158 (260)
T ss_pred EEEecccccCCCC-------------------------------------------------------CCcchhHHHHHH
Confidence 9999975432110 124579999999
Q ss_pred HHHHHHHh-----hcCCcEEEEecCccccCCCCCC-Cccccccc-ccHHHHHHhhcCCceeeccCCCceeeeeeHHHHHH
Q 010075 238 GEMLMQQS-----KENLSLVIIRPTVVSGTYKEPF-PGWVEDLK-TINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVN 310 (519)
Q Consensus 238 aE~lv~~~-----~~~lp~~IvRPs~V~g~~~~p~-~gw~~~~~-~~~~~i~~~~~g~~~~~~~~~~~~~d~vpVDdva~ 310 (519)
.|.+++.. ..++.+.+++||.|.++..... +.+.+... ........+.... ...+ ...+...+|+++
T Consensus 159 ~~~l~~~~a~~~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~p-----~~~~~~~~~va~ 232 (260)
T PRK06523 159 LSTYSKSLSKEVAPKGVRVNTVSPGWIETEAAVALAERLAEAAGTDYEGAKQIIMDSL-GGIP-----LGRPAEPEEVAE 232 (260)
T ss_pred HHHHHHHHHHHHhhcCcEEEEEecCcccCccHHHHHHHHHhhcCCCHHHHHHHHHHHh-ccCc-----cCCCCCHHHHHH
Confidence 99888765 3579999999999987643210 00000000 0000000000000 0001 112456799999
Q ss_pred HHHHHHHHhccCCCCCcEEEecCCCC
Q 010075 311 AMIVAMVAHAKQPSDANIYHVGSSLR 336 (519)
Q Consensus 311 aii~a~~~~~~~~~~~~iyni~s~~~ 336 (519)
++..++..... .-.++++++.+|..
T Consensus 233 ~~~~l~s~~~~-~~~G~~~~vdgg~~ 257 (260)
T PRK06523 233 LIAFLASDRAA-SITGTEYVIDGGTV 257 (260)
T ss_pred HHHHHhCcccc-cccCceEEecCCcc
Confidence 99888863322 22367888877743
|
|
| >PRK06181 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.65 E-value=1.1e-14 Score=143.96 Aligned_cols=202 Identities=17% Similarity=0.239 Sum_probs=136.3
Q ss_pred CCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEEe
Q 010075 12 NKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVP 91 (519)
Q Consensus 12 ~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v~ 91 (519)
+++|+||||+|+||++++++|++.| .+|+++.|+.... +.+.+ .++.. ..++.++.
T Consensus 1 ~~~vlVtGasg~iG~~la~~l~~~g---~~Vi~~~r~~~~~---~~~~~---------~l~~~---------~~~~~~~~ 56 (263)
T PRK06181 1 GKVVIITGASEGIGRALAVRLARAG---AQLVLAARNETRL---ASLAQ---------ELADH---------GGEALVVP 56 (263)
T ss_pred CCEEEEecCCcHHHHHHHHHHHHCC---CEEEEEeCCHHHH---HHHHH---------HHHhc---------CCcEEEEE
Confidence 4789999999999999999999988 5788888864221 11111 11111 24688899
Q ss_pred ccCCCCCCCCChhhhHHHHh-------cCccEEEEcCccCCcc--------ccHHHHHHHhHHHHHHHHHHHHhc--cCC
Q 010075 92 GDISSEDLGLKDSNLKEELW-------NELDIMVNSAAITKFD--------ERYDVAFGINTLGVIHLVNFAKKC--VKL 154 (519)
Q Consensus 92 gDl~~~~lgls~~~~~~~l~-------~~vdiViH~Aa~v~f~--------~~~~~~~~~Nv~gt~~ll~~a~~~--~~l 154 (519)
+|++++ +....++ .++|+|||+|+..... +.+...+++|+.|+.++++.+... .+.
T Consensus 57 ~Dl~~~-------~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~ 129 (263)
T PRK06181 57 TDVSDA-------EACERLIEAAVARFGGIDILVNNAGITMWSRFDELTDLSVFERVMRVNYLGAVYCTHAALPHLKASR 129 (263)
T ss_pred ccCCCH-------HHHHHHHHHHHHHcCCCCEEEECCCcccccchhccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC
Confidence 999963 2222332 3689999999875421 225667999999999999988532 245
Q ss_pred ceEEEEecceeecCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcHHHHH
Q 010075 155 KVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFT 234 (519)
Q Consensus 155 ~~~V~vSTa~v~~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~Y~~s 234 (519)
.++|++||...+... .....|+.+
T Consensus 130 ~~iv~~sS~~~~~~~--------------------------------------------------------~~~~~Y~~s 153 (263)
T PRK06181 130 GQIVVVSSLAGLTGV--------------------------------------------------------PTRSGYAAS 153 (263)
T ss_pred CEEEEEecccccCCC--------------------------------------------------------CCccHHHHH
Confidence 789999997654321 123579999
Q ss_pred HHHHHHHHHHh-----hcCCcEEEEecCccccCCCCCCCcccccccccHHHHHHhhcCCceeeccCCCceeeeeeHHHHH
Q 010075 235 KTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVV 309 (519)
Q Consensus 235 K~~aE~lv~~~-----~~~lp~~IvRPs~V~g~~~~p~~gw~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~d~vpVDdva 309 (519)
|+..|.+.+.. ..++++.+++|+.|.++....... ..+.. ....+....++++++|+|
T Consensus 154 K~~~~~~~~~l~~~~~~~~i~~~~i~pg~v~t~~~~~~~~---------------~~~~~--~~~~~~~~~~~~~~~dva 216 (263)
T PRK06181 154 KHALHGFFDSLRIELADDGVAVTVVCPGFVATDIRKRALD---------------GDGKP--LGKSPMQESKIMSAEECA 216 (263)
T ss_pred HHHHHHHHHHHHHHhhhcCceEEEEecCccccCcchhhcc---------------ccccc--cccccccccCCCCHHHHH
Confidence 99999888754 357999999999887764321100 00110 001112223789999999
Q ss_pred HHHHHHHH
Q 010075 310 NAMIVAMV 317 (519)
Q Consensus 310 ~aii~a~~ 317 (519)
++++.++.
T Consensus 217 ~~i~~~~~ 224 (263)
T PRK06181 217 EAILPAIA 224 (263)
T ss_pred HHHHHHhh
Confidence 99999986
|
|
| >PLN02253 xanthoxin dehydrogenase | Back alignment and domain information |
|---|
Probab=99.65 E-value=1e-14 Score=145.56 Aligned_cols=229 Identities=18% Similarity=0.177 Sum_probs=143.8
Q ss_pred hcCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceE
Q 010075 9 FLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKIT 88 (519)
Q Consensus 9 ~~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~ 88 (519)
.++||+++||||+|+||+++++.|++.| .+|+++.|.... .+++.+ +.+ ...++.
T Consensus 15 ~l~~k~~lItGas~gIG~~la~~l~~~G---~~v~~~~~~~~~---~~~~~~-------------~~~------~~~~~~ 69 (280)
T PLN02253 15 RLLGKVALVTGGATGIGESIVRLFHKHG---AKVCIVDLQDDL---GQNVCD-------------SLG------GEPNVC 69 (280)
T ss_pred ccCCCEEEEECCCchHHHHHHHHHHHcC---CEEEEEeCCHHH---HHHHHH-------------Hhc------CCCceE
Confidence 3678999999999999999999999988 577888775321 111111 100 024688
Q ss_pred EEeccCCCCCCCCChhhhHHHHh-------cCccEEEEcCccCCc---------cccHHHHHHHhHHHHHHHHHHHHhc-
Q 010075 89 FVPGDISSEDLGLKDSNLKEELW-------NELDIMVNSAAITKF---------DERYDVAFGINTLGVIHLVNFAKKC- 151 (519)
Q Consensus 89 ~v~gDl~~~~lgls~~~~~~~l~-------~~vdiViH~Aa~v~f---------~~~~~~~~~~Nv~gt~~ll~~a~~~- 151 (519)
++.+|++++ +..+.++ .++|+|||+||.... .+.++..+++|+.|+.++++.+.+.
T Consensus 70 ~~~~Dl~d~-------~~~~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~ 142 (280)
T PLN02253 70 FFHCDVTVE-------DDVSRAVDFTVDKFGTLDIMVNNAGLTGPPCPDIRNVELSEFEKVFDVNVKGVFLGMKHAARIM 142 (280)
T ss_pred EEEeecCCH-------HHHHHHHHHHHHHhCCCCEEEECCCcCCCCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHH
Confidence 999999963 2222333 369999999997531 1456788999999999998877542
Q ss_pred --cCCceEEEEecceeecCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCc
Q 010075 152 --VKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPN 229 (519)
Q Consensus 152 --~~l~~~V~vSTa~v~~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n 229 (519)
.+..++|++||....-.. ..+.
T Consensus 143 ~~~~~g~ii~isS~~~~~~~--------------------------------------------------------~~~~ 166 (280)
T PLN02253 143 IPLKKGSIVSLCSVASAIGG--------------------------------------------------------LGPH 166 (280)
T ss_pred HhcCCceEEEecChhhcccC--------------------------------------------------------CCCc
Confidence 133578888876432100 1235
Q ss_pred HHHHHHHHHHHHHHHh-----hcCCcEEEEecCccccCCCC-CCCcccccccccHHHHHHhhcCCceeeccCCCceeeee
Q 010075 230 TYVFTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKE-PFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVI 303 (519)
Q Consensus 230 ~Y~~sK~~aE~lv~~~-----~~~lp~~IvRPs~V~g~~~~-p~~gw~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~d~v 303 (519)
.|+.||+..|.+++.+ ..++.+..++|+.|.++... ..+. . ......+..... ............+
T Consensus 167 ~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pg~v~t~~~~~~~~~---~-~~~~~~~~~~~~----~~~~~~~l~~~~~ 238 (280)
T PLN02253 167 AYTGSKHAVLGLTRSVAAELGKHGIRVNCVSPYAVPTALALAHLPE---D-ERTEDALAGFRA----FAGKNANLKGVEL 238 (280)
T ss_pred ccHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCccccccccccccc---c-cchhhhhhhhHH----HhhcCCCCcCCCC
Confidence 7999999999998865 34799999999999776421 1111 0 000011100000 0000000011236
Q ss_pred eHHHHHHHHHHHHHHhccCCCCCcEEEecCC
Q 010075 304 PVDMVVNAMIVAMVAHAKQPSDANIYHVGSS 334 (519)
Q Consensus 304 pVDdva~aii~a~~~~~~~~~~~~iyni~s~ 334 (519)
.++|+|++++.++.... ..-.+.++++.+|
T Consensus 239 ~~~dva~~~~~l~s~~~-~~i~G~~i~vdgG 268 (280)
T PLN02253 239 TVDDVANAVLFLASDEA-RYISGLNLMIDGG 268 (280)
T ss_pred CHHHHHHHHHhhcCccc-ccccCcEEEECCc
Confidence 79999999998875322 1123578888776
|
|
| >PRK07666 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.65 E-value=1.4e-14 Score=141.09 Aligned_cols=197 Identities=15% Similarity=0.216 Sum_probs=136.2
Q ss_pred cCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 010075 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (519)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (519)
+++++++||||||+||++++++|++.| .+|+++.|+... .+.+.++ +.. ...++.+
T Consensus 5 ~~~~~vlVtG~sg~iG~~l~~~L~~~G---~~Vi~~~r~~~~---~~~~~~~---------~~~---------~~~~~~~ 60 (239)
T PRK07666 5 LQGKNALITGAGRGIGRAVAIALAKEG---VNVGLLARTEEN---LKAVAEE---------VEA---------YGVKVVI 60 (239)
T ss_pred CCCCEEEEEcCCchHHHHHHHHHHHCC---CEEEEEeCCHHH---HHHHHHH---------HHH---------hCCeEEE
Confidence 467899999999999999999999988 578888887532 1111111 111 1247889
Q ss_pred EeccCCCCCCCCChhhhHHHHh-------cCccEEEEcCccCCc-------cccHHHHHHHhHHHHHHHHHHHHhc---c
Q 010075 90 VPGDISSEDLGLKDSNLKEELW-------NELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKC---V 152 (519)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~-------~~vdiViH~Aa~v~f-------~~~~~~~~~~Nv~gt~~ll~~a~~~---~ 152 (519)
+.+|++++ +....++ .++|+|||+|+.... .++++..+++|+.|+.++++.+... .
T Consensus 61 ~~~D~~~~-------~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~ 133 (239)
T PRK07666 61 ATADVSDY-------EEVTAAIEQLKNELGSIDILINNAGISKFGKFLELDPAEWEKIIQVNLMGVYYATRAVLPSMIER 133 (239)
T ss_pred EECCCCCH-------HHHHHHHHHHHHHcCCccEEEEcCccccCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhC
Confidence 99999963 2222332 379999999987532 1446777999999999998877532 2
Q ss_pred CCceEEEEecceeecCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcHHH
Q 010075 153 KLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYV 232 (519)
Q Consensus 153 ~l~~~V~vSTa~v~~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~Y~ 232 (519)
+.+++|++||...+... .....|+
T Consensus 134 ~~~~iv~~ss~~~~~~~--------------------------------------------------------~~~~~Y~ 157 (239)
T PRK07666 134 QSGDIINISSTAGQKGA--------------------------------------------------------AVTSAYS 157 (239)
T ss_pred CCcEEEEEcchhhccCC--------------------------------------------------------CCCcchH
Confidence 45789999997644321 2235699
Q ss_pred HHHHHHHHHHHHh-----hcCCcEEEEecCccccCCCCCCCcccccccccHHHHHHhhcCCceeeccCCCceeeeeeHHH
Q 010075 233 FTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDM 307 (519)
Q Consensus 233 ~sK~~aE~lv~~~-----~~~lp~~IvRPs~V~g~~~~p~~gw~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~d~vpVDd 307 (519)
.+|+..+.+++.+ ..+++++++|||.+.++...... ... +.+ ..+++.+|
T Consensus 158 ~sK~a~~~~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~---------------~~~-------~~~---~~~~~~~~ 212 (239)
T PRK07666 158 ASKFGVLGLTESLMQEVRKHNIRVTALTPSTVATDMAVDLG---------------LTD-------GNP---DKVMQPED 212 (239)
T ss_pred HHHHHHHHHHHHHHHHhhccCcEEEEEecCcccCcchhhcc---------------ccc-------cCC---CCCCCHHH
Confidence 9999888887654 35799999999998876432110 000 011 23578999
Q ss_pred HHHHHHHHHHH
Q 010075 308 VVNAMIVAMVA 318 (519)
Q Consensus 308 va~aii~a~~~ 318 (519)
+|+.++.++..
T Consensus 213 ~a~~~~~~l~~ 223 (239)
T PRK07666 213 LAEFIVAQLKL 223 (239)
T ss_pred HHHHHHHHHhC
Confidence 99999999864
|
|
| >PRK09134 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.65 E-value=1e-14 Score=143.80 Aligned_cols=216 Identities=11% Similarity=0.104 Sum_probs=139.1
Q ss_pred CCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEE
Q 010075 11 ENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFV 90 (519)
Q Consensus 11 ~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v 90 (519)
.+|++|||||+|+||+++++.|++.| .+|+++.|..... .+.+.++ ++. ...++.++
T Consensus 8 ~~k~vlItGas~giG~~la~~l~~~g---~~v~~~~~~~~~~--~~~~~~~---------~~~---------~~~~~~~~ 64 (258)
T PRK09134 8 APRAALVTGAARRIGRAIALDLAAHG---FDVAVHYNRSRDE--AEALAAE---------IRA---------LGRRAVAL 64 (258)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCC---CEEEEEeCCCHHH--HHHHHHH---------HHh---------cCCeEEEE
Confidence 57899999999999999999999988 5677776643211 1111111 111 02468899
Q ss_pred eccCCCCCCCCChhhhHHHH-------hcCccEEEEcCccCCc-------cccHHHHHHHhHHHHHHHHHHHHhc-c--C
Q 010075 91 PGDISSEDLGLKDSNLKEEL-------WNELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKC-V--K 153 (519)
Q Consensus 91 ~gDl~~~~lgls~~~~~~~l-------~~~vdiViH~Aa~v~f-------~~~~~~~~~~Nv~gt~~ll~~a~~~-~--~ 153 (519)
.+|++++. ....+ ...+|+|||+||.... .+.++..+++|+.|+..+++.+.+. . .
T Consensus 65 ~~Dl~d~~-------~~~~~~~~~~~~~~~iD~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~ 137 (258)
T PRK09134 65 QADLADEA-------EVRALVARASAALGPITLLVNNASLFEYDSAASFTRASWDRHMATNLRAPFVLAQAFARALPADA 137 (258)
T ss_pred EcCCCCHH-------HHHHHHHHHHHHcCCCCEEEECCcCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC
Confidence 99999632 22222 2458999999986432 2456788999999999999887653 1 2
Q ss_pred CceEEEEecceeecCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcHHHH
Q 010075 154 LKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVF 233 (519)
Q Consensus 154 l~~~V~vSTa~v~~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~Y~~ 233 (519)
-..+|++||...+... +....|+.
T Consensus 138 ~~~iv~~~s~~~~~~~--------------------------------------------------------p~~~~Y~~ 161 (258)
T PRK09134 138 RGLVVNMIDQRVWNLN--------------------------------------------------------PDFLSYTL 161 (258)
T ss_pred CceEEEECchhhcCCC--------------------------------------------------------CCchHHHH
Confidence 3477777765332210 11246999
Q ss_pred HHHHHHHHHHHh----hcCCcEEEEecCccccCCCCCCCcccccccccHHHHHHhhcCCceeeccCCCceeeeeeHHHHH
Q 010075 234 TKTMGEMLMQQS----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVV 309 (519)
Q Consensus 234 sK~~aE~lv~~~----~~~lp~~IvRPs~V~g~~~~p~~gw~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~d~vpVDdva 309 (519)
||+..|.+.+.+ ..++.++.++||.+....... . ..+.....+.. . .....++|+|
T Consensus 162 sK~a~~~~~~~la~~~~~~i~v~~i~PG~v~t~~~~~----------~-~~~~~~~~~~~---~------~~~~~~~d~a 221 (258)
T PRK09134 162 SKAALWTATRTLAQALAPRIRVNAIGPGPTLPSGRQS----------P-EDFARQHAATP---L------GRGSTPEEIA 221 (258)
T ss_pred HHHHHHHHHHHHHHHhcCCcEEEEeecccccCCcccC----------h-HHHHHHHhcCC---C------CCCcCHHHHH
Confidence 999999888765 235899999999886542210 0 11111111110 1 1236799999
Q ss_pred HHHHHHHHHhccCCCCCcEEEecCCC
Q 010075 310 NAMIVAMVAHAKQPSDANIYHVGSSL 335 (519)
Q Consensus 310 ~aii~a~~~~~~~~~~~~iyni~s~~ 335 (519)
++++.++.... ..+++|++.+|.
T Consensus 222 ~~~~~~~~~~~---~~g~~~~i~gg~ 244 (258)
T PRK09134 222 AAVRYLLDAPS---VTGQMIAVDGGQ 244 (258)
T ss_pred HHHHHHhcCCC---cCCCEEEECCCe
Confidence 99999986321 236788888774
|
|
| >PRK08264 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.64 E-value=1.5e-14 Score=140.57 Aligned_cols=161 Identities=16% Similarity=0.220 Sum_probs=119.3
Q ss_pred cCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 010075 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (519)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (519)
+.+++|+||||||+||+++++.|++.|. .+|+++.|+...... ...++.+
T Consensus 4 ~~~~~vlItGgsg~iG~~la~~l~~~G~--~~V~~~~r~~~~~~~----------------------------~~~~~~~ 53 (238)
T PRK08264 4 IKGKVVLVTGANRGIGRAFVEQLLARGA--AKVYAAARDPESVTD----------------------------LGPRVVP 53 (238)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCc--ccEEEEecChhhhhh----------------------------cCCceEE
Confidence 4678999999999999999999999883 278888887432100 0257889
Q ss_pred EeccCCCCCCCCChhhhHHHHhc---CccEEEEcCcc-CC---c----cccHHHHHHHhHHHHHHHHHHHHhc---cCCc
Q 010075 90 VPGDISSEDLGLKDSNLKEELWN---ELDIMVNSAAI-TK---F----DERYDVAFGINTLGVIHLVNFAKKC---VKLK 155 (519)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~~---~vdiViH~Aa~-v~---f----~~~~~~~~~~Nv~gt~~ll~~a~~~---~~l~ 155 (519)
+.+|++++ +....+.+ .+|+|||+|+. .. + .+.+...+++|+.++..+++++.+. .+..
T Consensus 54 ~~~D~~~~-------~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~ 126 (238)
T PRK08264 54 LQLDVTDP-------ASVAAAAEAASDVTILVNNAGIFRTGSLLLEGDEDALRAEMETNYFGPLAMARAFAPVLAANGGG 126 (238)
T ss_pred EEecCCCH-------HHHHHHHHhcCCCCEEEECCCcCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCC
Confidence 99999963 22234443 58999999997 22 1 2456677899999999999887532 2457
Q ss_pred eEEEEecceeecCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcHHHHHH
Q 010075 156 VFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTK 235 (519)
Q Consensus 156 ~~V~vSTa~v~~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~Y~~sK 235 (519)
+||++||...+... .....|+.+|
T Consensus 127 ~~v~~sS~~~~~~~--------------------------------------------------------~~~~~y~~sK 150 (238)
T PRK08264 127 AIVNVLSVLSWVNF--------------------------------------------------------PNLGTYSASK 150 (238)
T ss_pred EEEEEcChhhccCC--------------------------------------------------------CCchHhHHHH
Confidence 89999997654321 2346799999
Q ss_pred HHHHHHHHHh-----hcCCcEEEEecCccccCC
Q 010075 236 TMGEMLMQQS-----KENLSLVIIRPTVVSGTY 263 (519)
Q Consensus 236 ~~aE~lv~~~-----~~~lp~~IvRPs~V~g~~ 263 (519)
..+|.+.+.. ..+++++++||+.+.++.
T Consensus 151 ~a~~~~~~~l~~~~~~~~i~~~~v~pg~v~t~~ 183 (238)
T PRK08264 151 AAAWSLTQALRAELAPQGTRVLGVHPGPIDTDM 183 (238)
T ss_pred HHHHHHHHHHHHHhhhcCeEEEEEeCCcccccc
Confidence 9999888765 247999999999987654
|
|
| >PRK08220 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.64 E-value=9.9e-15 Score=143.07 Aligned_cols=219 Identities=15% Similarity=0.118 Sum_probs=145.4
Q ss_pred cCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 010075 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (519)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (519)
+++|++|||||+|+||+.++++|++.| .+|+++.|+. +. . ...++.+
T Consensus 6 ~~~k~vlItGas~~iG~~la~~l~~~G---~~v~~~~~~~--------~~--------------~--------~~~~~~~ 52 (252)
T PRK08220 6 FSGKTVWVTGAAQGIGYAVALAFVEAG---AKVIGFDQAF--------LT--------------Q--------EDYPFAT 52 (252)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCC---CEEEEEecch--------hh--------------h--------cCCceEE
Confidence 678999999999999999999999988 5778888864 00 0 0256788
Q ss_pred EeccCCCCCCCCChhhhHHHHh-------cCccEEEEcCccCCc-------cccHHHHHHHhHHHHHHHHHHHHhc---c
Q 010075 90 VPGDISSEDLGLKDSNLKEELW-------NELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKC---V 152 (519)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~-------~~vdiViH~Aa~v~f-------~~~~~~~~~~Nv~gt~~ll~~a~~~---~ 152 (519)
+.+|++++ +..+.++ .++|+|||+|+.... .+.++..+++|+.++..+++.+... +
T Consensus 53 ~~~D~~~~-------~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~ 125 (252)
T PRK08220 53 FVLDVSDA-------AAVAQVCQRLLAETGPLDVLVNAAGILRMGATDSLSDEDWQQTFAVNAGGAFNLFRAVMPQFRRQ 125 (252)
T ss_pred EEecCCCH-------HHHHHHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhC
Confidence 99999953 2223333 358999999997643 2456778999999999999887532 2
Q ss_pred CCceEEEEecceeecCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcHHH
Q 010075 153 KLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYV 232 (519)
Q Consensus 153 ~l~~~V~vSTa~v~~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~Y~ 232 (519)
+..++|++||....... .....|+
T Consensus 126 ~~g~iv~~ss~~~~~~~--------------------------------------------------------~~~~~Y~ 149 (252)
T PRK08220 126 RSGAIVTVGSNAAHVPR--------------------------------------------------------IGMAAYG 149 (252)
T ss_pred CCCEEEEECCchhccCC--------------------------------------------------------CCCchhH
Confidence 44689999997543211 1235799
Q ss_pred HHHHHHHHHHHHh-----hcCCcEEEEecCccccCCCCCC-CcccccccccHHHHHHhhcCCceeeccCCCceeeeeeHH
Q 010075 233 FTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPF-PGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVD 306 (519)
Q Consensus 233 ~sK~~aE~lv~~~-----~~~lp~~IvRPs~V~g~~~~p~-~gw~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~d~vpVD 306 (519)
.+|+..|.+++.. ..++++.+++|+.|.++..... +.-........+...... .......+++++
T Consensus 150 ~sK~a~~~~~~~la~e~~~~~i~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~ 220 (252)
T PRK08220 150 ASKAALTSLAKCVGLELAPYGVRCNVVSPGSTDTDMQRTLWVDEDGEQQVIAGFPEQFK---------LGIPLGKIARPQ 220 (252)
T ss_pred HHHHHHHHHHHHHHHHhhHhCeEEEEEecCcCcchhhhhhccchhhhhhhhhhHHHHHh---------hcCCCcccCCHH
Confidence 9999999998765 3579999999999988754211 000000000000001111 111234678999
Q ss_pred HHHHHHHHHHHHhccCCCCCcEEEecCC
Q 010075 307 MVVNAMIVAMVAHAKQPSDANIYHVGSS 334 (519)
Q Consensus 307 dva~aii~a~~~~~~~~~~~~iyni~s~ 334 (519)
|+|++++.++..... .-.+++..+.+|
T Consensus 221 dva~~~~~l~~~~~~-~~~g~~i~~~gg 247 (252)
T PRK08220 221 EIANAVLFLASDLAS-HITLQDIVVDGG 247 (252)
T ss_pred HHHHHHHHHhcchhc-CccCcEEEECCC
Confidence 999999998864322 223556666655
|
|
| >PRK06398 aldose dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.64 E-value=2.1e-14 Score=141.81 Aligned_cols=224 Identities=15% Similarity=0.166 Sum_probs=143.2
Q ss_pred cCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 010075 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (519)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (519)
++||++|||||+|+||+++++.|++.| .+|+++.|+.... .++..
T Consensus 4 l~gk~vlItGas~gIG~~ia~~l~~~G---~~Vi~~~r~~~~~--------------------------------~~~~~ 48 (258)
T PRK06398 4 LKDKVAIVTGGSQGIGKAVVNRLKEEG---SNVINFDIKEPSY--------------------------------NDVDY 48 (258)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCC---CeEEEEeCCcccc--------------------------------CceEE
Confidence 568999999999999999999999988 6788888864321 35778
Q ss_pred EeccCCCCCCCCChhhhHHHH---hcCccEEEEcCccCCc-------cccHHHHHHHhHHHHHHHHHHHHhc---cCCce
Q 010075 90 VPGDISSEDLGLKDSNLKEEL---WNELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKC---VKLKV 156 (519)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l---~~~vdiViH~Aa~v~f-------~~~~~~~~~~Nv~gt~~ll~~a~~~---~~l~~ 156 (519)
+.+|++++.. -.+..+.+ ..++|+|||+||.... .+.++..+++|+.|+..+++.+.+. .+..+
T Consensus 49 ~~~D~~~~~~---i~~~~~~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ 125 (258)
T PRK06398 49 FKVDVSNKEQ---VIKGIDYVISKYGRIDILVNNAGIESYGAIHAVEEDEWDRIINVNVNGIFLMSKYTIPYMLKQDKGV 125 (258)
T ss_pred EEccCCCHHH---HHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeE
Confidence 9999996421 01111111 2369999999997532 2457778999999999988877532 24578
Q ss_pred EEEEecceeecCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcHHHHHHH
Q 010075 157 FVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKT 236 (519)
Q Consensus 157 ~V~vSTa~v~~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~Y~~sK~ 236 (519)
+|++||....... .....|+.||+
T Consensus 126 iv~isS~~~~~~~--------------------------------------------------------~~~~~Y~~sKa 149 (258)
T PRK06398 126 IINIASVQSFAVT--------------------------------------------------------RNAAAYVTSKH 149 (258)
T ss_pred EEEeCcchhccCC--------------------------------------------------------CCCchhhhhHH
Confidence 9999997544211 12357999999
Q ss_pred HHHHHHHHh----hcCCcEEEEecCccccCCCCCCCcccccccccHHHHHHhhcCCceeeccCCCceeeeeeHHHHHHHH
Q 010075 237 MGEMLMQQS----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAM 312 (519)
Q Consensus 237 ~aE~lv~~~----~~~lp~~IvRPs~V~g~~~~p~~gw~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~d~vpVDdva~ai 312 (519)
..+.+.+.. .+++.+..++||.|-.+.......+... ..+........ . .........+...+|+|+++
T Consensus 150 al~~~~~~la~e~~~~i~vn~i~PG~v~T~~~~~~~~~~~~-~~~~~~~~~~~-~-----~~~~~~~~~~~~p~eva~~~ 222 (258)
T PRK06398 150 AVLGLTRSIAVDYAPTIRCVAVCPGSIRTPLLEWAAELEVG-KDPEHVERKIR-E-----WGEMHPMKRVGKPEEVAYVV 222 (258)
T ss_pred HHHHHHHHHHHHhCCCCEEEEEecCCccchHHhhhhhcccc-CChhhhHHHHH-h-----hhhcCCcCCCcCHHHHHHHH
Confidence 999988865 3348999999998866533211111000 00000000000 0 00111122356789999999
Q ss_pred HHHHHHhccCCCCCcEEEecCCC
Q 010075 313 IVAMVAHAKQPSDANIYHVGSSL 335 (519)
Q Consensus 313 i~a~~~~~~~~~~~~iyni~s~~ 335 (519)
+.++.... ..-.+.++.+.+|.
T Consensus 223 ~~l~s~~~-~~~~G~~i~~dgg~ 244 (258)
T PRK06398 223 AFLASDLA-SFITGECVTVDGGL 244 (258)
T ss_pred HHHcCccc-CCCCCcEEEECCcc
Confidence 88875322 22236677777763
|
|
| >PRK12937 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.64 E-value=1.9e-14 Score=140.28 Aligned_cols=221 Identities=14% Similarity=0.127 Sum_probs=141.7
Q ss_pred cCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 010075 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (519)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (519)
.++++|+||||+|+||+++++.|++.| .+|+++.|+... ..+.+.+ .+.. ...++.+
T Consensus 3 ~~~~~vlItG~~~~iG~~la~~l~~~g---~~v~~~~~~~~~--~~~~~~~---------~~~~---------~~~~~~~ 59 (245)
T PRK12937 3 LSNKVAIVTGASRGIGAAIARRLAADG---FAVAVNYAGSAA--AADELVA---------EIEA---------AGGRAIA 59 (245)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCC---CEEEEecCCCHH--HHHHHHH---------HHHh---------cCCeEEE
Confidence 357999999999999999999999998 466666665421 1111111 1111 1256889
Q ss_pred EeccCCCCCCCCChhhhHHHHh-------cCccEEEEcCccCCc-------cccHHHHHHHhHHHHHHHHHHHHh-ccCC
Q 010075 90 VPGDISSEDLGLKDSNLKEELW-------NELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKK-CVKL 154 (519)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~-------~~vdiViH~Aa~v~f-------~~~~~~~~~~Nv~gt~~ll~~a~~-~~~l 154 (519)
+.+|++++ +..+.++ .++|+|||+||.... .+.++..+++|+.|+.++++.+.+ +..-
T Consensus 60 ~~~Dl~~~-------~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~ 132 (245)
T PRK12937 60 VQADVADA-------AAVTRLFDAAETAFGRIDVLVNNAGVMPLGTIADFDLEDFDRTIATNLRGAFVVLREAARHLGQG 132 (245)
T ss_pred EECCCCCH-------HHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHhhhchHHHHHHHHHHHHhccC
Confidence 99999963 2222332 369999999997542 245677899999999999988754 2233
Q ss_pred ceEEEEecceeecCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcHHHHH
Q 010075 155 KVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFT 234 (519)
Q Consensus 155 ~~~V~vSTa~v~~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~Y~~s 234 (519)
.++|++||....... +..+.|+.+
T Consensus 133 ~~iv~~ss~~~~~~~--------------------------------------------------------~~~~~Y~~s 156 (245)
T PRK12937 133 GRIINLSTSVIALPL--------------------------------------------------------PGYGPYAAS 156 (245)
T ss_pred cEEEEEeeccccCCC--------------------------------------------------------CCCchhHHH
Confidence 589999986543211 223579999
Q ss_pred HHHHHHHHHHh-----hcCCcEEEEecCccccCCCCCCCcccccccccHHHHHHhhcCCceeeccCCCceeeeeeHHHHH
Q 010075 235 KTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVV 309 (519)
Q Consensus 235 K~~aE~lv~~~-----~~~lp~~IvRPs~V~g~~~~p~~gw~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~d~vpVDdva 309 (519)
|...|.+++.. ..++.+++++||.+-++... +. .....+..+.... ...-+.+++|++
T Consensus 157 K~a~~~~~~~~a~~~~~~~i~v~~i~pg~~~t~~~~------~~--~~~~~~~~~~~~~---------~~~~~~~~~d~a 219 (245)
T PRK12937 157 KAAVEGLVHVLANELRGRGITVNAVAPGPVATELFF------NG--KSAEQIDQLAGLA---------PLERLGTPEEIA 219 (245)
T ss_pred HHHHHHHHHHHHHHhhhcCeEEEEEEeCCccCchhc------cc--CCHHHHHHHHhcC---------CCCCCCCHHHHH
Confidence 99999988765 34789999999987665320 00 0011111111111 111235679999
Q ss_pred HHHHHHHHHhccCCCCCcEEEecCC
Q 010075 310 NAMIVAMVAHAKQPSDANIYHVGSS 334 (519)
Q Consensus 310 ~aii~a~~~~~~~~~~~~iyni~s~ 334 (519)
++++.++... ...-.+.++++.++
T Consensus 220 ~~~~~l~~~~-~~~~~g~~~~~~~g 243 (245)
T PRK12937 220 AAVAFLAGPD-GAWVNGQVLRVNGG 243 (245)
T ss_pred HHHHHHcCcc-ccCccccEEEeCCC
Confidence 9988887532 22223678888654
|
|
| >PRK12936 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed | Back alignment and domain information |
|---|
Probab=99.64 E-value=6.5e-15 Score=143.52 Aligned_cols=216 Identities=15% Similarity=0.180 Sum_probs=137.4
Q ss_pred cCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 010075 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (519)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (519)
+++++++||||||+||+++++.|++.| ..|++..|+... .+.+. ... ..++.+
T Consensus 4 ~~~~~vlItGa~g~iG~~la~~l~~~g---~~v~~~~~~~~~---~~~~~-------------~~~--------~~~~~~ 56 (245)
T PRK12936 4 LSGRKALVTGASGGIGEEIARLLHAQG---AIVGLHGTRVEK---LEALA-------------AEL--------GERVKI 56 (245)
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHCC---CEEEEEcCCHHH---HHHHH-------------HHh--------CCceEE
Confidence 468999999999999999999999988 466666664321 11111 110 246788
Q ss_pred EeccCCCCCCCCChhhhHHHH-------hcCccEEEEcCccCCc-------cccHHHHHHHhHHHHHHHHHHHHhc---c
Q 010075 90 VPGDISSEDLGLKDSNLKEEL-------WNELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKC---V 152 (519)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l-------~~~vdiViH~Aa~v~f-------~~~~~~~~~~Nv~gt~~ll~~a~~~---~ 152 (519)
+.+|+++. +..+.+ ..++|+|||+|+.... .+.++..+++|+.|+.++++.+.+. .
T Consensus 57 ~~~D~~~~-------~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~ 129 (245)
T PRK12936 57 FPANLSDR-------DEVKALGQKAEADLEGVDILVNNAGITKDGLFVRMSDEDWDSVLEVNLTATFRLTRELTHPMMRR 129 (245)
T ss_pred EEccCCCH-------HHHHHHHHHHHHHcCCCCEEEECCCCCCCCccccCCHHHHHHHHhhccHHHHHHHHHHHHHHHHh
Confidence 99999953 222232 3469999999997532 2457788999999999988876431 2
Q ss_pred CCceEEEEecceeecCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcHHH
Q 010075 153 KLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYV 232 (519)
Q Consensus 153 ~l~~~V~vSTa~v~~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~Y~ 232 (519)
+..+||++||....... .....|+
T Consensus 130 ~~~~iv~~sS~~~~~~~--------------------------------------------------------~~~~~Y~ 153 (245)
T PRK12936 130 RYGRIINITSVVGVTGN--------------------------------------------------------PGQANYC 153 (245)
T ss_pred CCCEEEEECCHHhCcCC--------------------------------------------------------CCCcchH
Confidence 55789999996433211 1123588
Q ss_pred HHHHHHHHHHHHh-----hcCCcEEEEecCccccCCCCCCCcccccccccHHHHHHhhcCCceeeccCCCceeeeeeHHH
Q 010075 233 FTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDM 307 (519)
Q Consensus 233 ~sK~~aE~lv~~~-----~~~lp~~IvRPs~V~g~~~~p~~gw~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~d~vpVDd 307 (519)
.+|+..+.+++.. ..+++++.++|+.+..+.....+. .......+.. ....+...++
T Consensus 154 ~sk~a~~~~~~~la~~~~~~~i~v~~i~pg~~~t~~~~~~~~----------~~~~~~~~~~--------~~~~~~~~~~ 215 (245)
T PRK12936 154 ASKAGMIGFSKSLAQEIATRNVTVNCVAPGFIESAMTGKLND----------KQKEAIMGAI--------PMKRMGTGAE 215 (245)
T ss_pred HHHHHHHHHHHHHHHHhhHhCeEEEEEEECcCcCchhcccCh----------HHHHHHhcCC--------CCCCCcCHHH
Confidence 8888776666543 357999999999875543211100 0000001100 1122456899
Q ss_pred HHHHHHHHHHHhccCCCCCcEEEecCC
Q 010075 308 VVNAMIVAMVAHAKQPSDANIYHVGSS 334 (519)
Q Consensus 308 va~aii~a~~~~~~~~~~~~iyni~s~ 334 (519)
+++++..++... ...-.++++++.+|
T Consensus 216 ia~~~~~l~~~~-~~~~~G~~~~~~~g 241 (245)
T PRK12936 216 VASAVAYLASSE-AAYVTGQTIHVNGG 241 (245)
T ss_pred HHHHHHHHcCcc-ccCcCCCEEEECCC
Confidence 999998776432 22224789999877
|
|
| >PRK08324 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.64 E-value=9.4e-15 Score=163.42 Aligned_cols=229 Identities=18% Similarity=0.202 Sum_probs=152.3
Q ss_pred cCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 010075 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (519)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (519)
+.||+|+||||+|+||+.+++.|++.| .+|+++.|+.... +.+.+ +... ..++.+
T Consensus 420 l~gk~vLVTGasggIG~~la~~L~~~G---a~Vvl~~r~~~~~---~~~~~-------------~l~~------~~~v~~ 474 (681)
T PRK08324 420 LAGKVALVTGAAGGIGKATAKRLAAEG---ACVVLADLDEEAA---EAAAA-------------ELGG------PDRALG 474 (681)
T ss_pred CCCCEEEEecCCCHHHHHHHHHHHHCc---CEEEEEeCCHHHH---HHHHH-------------HHhc------cCcEEE
Confidence 578999999999999999999999988 5788888875321 11111 1000 136889
Q ss_pred EeccCCCCCCCCChhhhHHHHh-------cCccEEEEcCccCCc-------cccHHHHHHHhHHHHHHHHHHHHhc---c
Q 010075 90 VPGDISSEDLGLKDSNLKEELW-------NELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKC---V 152 (519)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~-------~~vdiViH~Aa~v~f-------~~~~~~~~~~Nv~gt~~ll~~a~~~---~ 152 (519)
+.+|++++ +..+.++ .++|+|||+||.... .+.++..+++|+.|+..+++.+.+. .
T Consensus 475 v~~Dvtd~-------~~v~~~~~~~~~~~g~iDvvI~~AG~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~ 547 (681)
T PRK08324 475 VACDVTDE-------AAVQAAFEEAALAFGGVDIVVSNAGIAISGPIEETSDEDWRRSFDVNATGHFLVAREAVRIMKAQ 547 (681)
T ss_pred EEecCCCH-------HHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc
Confidence 99999963 2222222 369999999996432 2457778999999999998777532 1
Q ss_pred CC-ceEEEEecceeecCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcHH
Q 010075 153 KL-KVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTY 231 (519)
Q Consensus 153 ~l-~~~V~vSTa~v~~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~Y 231 (519)
+. .+||++||....... .....|
T Consensus 548 ~~~g~iV~vsS~~~~~~~--------------------------------------------------------~~~~~Y 571 (681)
T PRK08324 548 GLGGSIVFIASKNAVNPG--------------------------------------------------------PNFGAY 571 (681)
T ss_pred CCCcEEEEECCccccCCC--------------------------------------------------------CCcHHH
Confidence 33 689999997543211 123579
Q ss_pred HHHHHHHHHHHHHh-----hcCCcEEEEecCccc-cCCCCCCCcccccccccHHHHHHhhcCCce----eeccCCCceee
Q 010075 232 VFTKTMGEMLMQQS-----KENLSLVIIRPTVVS-GTYKEPFPGWVEDLKTINTLFVASAQGNLR----CLVGETKVIMD 301 (519)
Q Consensus 232 ~~sK~~aE~lv~~~-----~~~lp~~IvRPs~V~-g~~~~p~~gw~~~~~~~~~~i~~~~~g~~~----~~~~~~~~~~d 301 (519)
+.||+..+.+++.+ ..++++.+++|+.|+ ++... .+.|... .....|... ..+.++....+
T Consensus 572 ~asKaa~~~l~~~la~e~~~~gIrvn~v~Pg~v~~~t~~~-~~~~~~~--------~~~~~g~~~~~~~~~~~~~~~l~~ 642 (681)
T PRK08324 572 GAAKAAELHLVRQLALELGPDGIRVNGVNPDAVVRGSGIW-TGEWIEA--------RAAAYGLSEEELEEFYRARNLLKR 642 (681)
T ss_pred HHHHHHHHHHHHHHHHHhcccCeEEEEEeCceeecCCccc-cchhhhh--------hhhhccCChHHHHHHHHhcCCcCC
Confidence 99999999998865 346999999999997 44210 1122110 001111111 12344556678
Q ss_pred eeeHHHHHHHHHHHHHHhccCCCCCcEEEecCCCC
Q 010075 302 VIPVDMVVNAMIVAMVAHAKQPSDANIYHVGSSLR 336 (519)
Q Consensus 302 ~vpVDdva~aii~a~~~~~~~~~~~~iyni~s~~~ 336 (519)
+++++|+|++++.++..... ...+.+|++.+|..
T Consensus 643 ~v~~~DvA~a~~~l~s~~~~-~~tG~~i~vdgG~~ 676 (681)
T PRK08324 643 EVTPEDVAEAVVFLASGLLS-KTTGAIITVDGGNA 676 (681)
T ss_pred ccCHHHHHHHHHHHhCcccc-CCcCCEEEECCCch
Confidence 99999999999998742222 22368999998854
|
|
| >PRK06935 2-deoxy-D-gluconate 3-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.63 E-value=1.6e-14 Score=142.33 Aligned_cols=220 Identities=16% Similarity=0.174 Sum_probs=143.8
Q ss_pred cCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 010075 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (519)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (519)
++||+|+||||||+||+.+++.|++.| .+|+++.|+.+. +++.+.+ . + ...++.+
T Consensus 13 l~~k~vlItGas~gIG~~ia~~l~~~G---~~v~~~~~~~~~----~~~~~~~---------~-~--------~~~~~~~ 67 (258)
T PRK06935 13 LDGKVAIVTGGNTGLGQGYAVALAKAG---ADIIITTHGTNW----DETRRLI---------E-K--------EGRKVTF 67 (258)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCC---CEEEEEeCCcHH----HHHHHHH---------H-h--------cCCceEE
Confidence 578999999999999999999999988 677888887221 2222111 0 0 1246889
Q ss_pred EeccCCCCCCCCChhhhHHHHh-------cCccEEEEcCccCCc-------cccHHHHHHHhHHHHHHHHHHHHhc---c
Q 010075 90 VPGDISSEDLGLKDSNLKEELW-------NELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKC---V 152 (519)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~-------~~vdiViH~Aa~v~f-------~~~~~~~~~~Nv~gt~~ll~~a~~~---~ 152 (519)
+.+|++++ +..+.++ ..+|++||+|+.... .+.++..+++|+.|+..+++.+.+. +
T Consensus 68 ~~~D~~~~-------~~i~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~ 140 (258)
T PRK06935 68 VQVDLTKP-------ESAEKVVKEALEEFGKIDILVNNAGTIRRAPLLEYKDEDWNAVMDINLNSVYHLSQAVAKVMAKQ 140 (258)
T ss_pred EEcCCCCH-------HHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhCHHHHHHHHHHHHHHHhc
Confidence 99999963 2222333 368999999997532 2457788999999988887766431 2
Q ss_pred CCceEEEEecceeecCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcHHH
Q 010075 153 KLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYV 232 (519)
Q Consensus 153 ~l~~~V~vSTa~v~~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~Y~ 232 (519)
+..++|++||...+... .....|+
T Consensus 141 ~~g~iv~isS~~~~~~~--------------------------------------------------------~~~~~Y~ 164 (258)
T PRK06935 141 GSGKIINIASMLSFQGG--------------------------------------------------------KFVPAYT 164 (258)
T ss_pred CCeEEEEECCHHhccCC--------------------------------------------------------CCchhhH
Confidence 45689999997654221 1234799
Q ss_pred HHHHHHHHHHHHh-----hcCCcEEEEecCccccCCCCCCCcccccccccHHHHHHhhcCCceeeccCCCceeeeeeHHH
Q 010075 233 FTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDM 307 (519)
Q Consensus 233 ~sK~~aE~lv~~~-----~~~lp~~IvRPs~V~g~~~~p~~gw~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~d~vpVDd 307 (519)
.+|+..|.+++.+ ..++.+.+++||.|..+...+.+.. . ......... ++ ...+...+|
T Consensus 165 asK~a~~~~~~~la~e~~~~gi~v~~i~PG~v~t~~~~~~~~~------~-~~~~~~~~~----~~-----~~~~~~~~d 228 (258)
T PRK06935 165 ASKHGVAGLTKAFANELAAYNIQVNAIAPGYIKTANTAPIRAD------K-NRNDEILKR----IP-----AGRWGEPDD 228 (258)
T ss_pred HHHHHHHHHHHHHHHHhhhhCeEEEEEEeccccccchhhcccC------h-HHHHHHHhc----CC-----CCCCCCHHH
Confidence 9999999988765 3479999999999877643222110 0 000111110 01 123566789
Q ss_pred HHHHHHHHHHHhccCCCCCcEEEecCC
Q 010075 308 VVNAMIVAMVAHAKQPSDANIYHVGSS 334 (519)
Q Consensus 308 va~aii~a~~~~~~~~~~~~iyni~s~ 334 (519)
+++++..++.... ..-.+.++.+.+|
T Consensus 229 va~~~~~l~s~~~-~~~~G~~i~~dgg 254 (258)
T PRK06935 229 LMGAAVFLASRAS-DYVNGHILAVDGG 254 (258)
T ss_pred HHHHHHHHcChhh-cCCCCCEEEECCC
Confidence 9999988775322 2223677777665
|
|
| >PRK07825 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.63 E-value=9.4e-15 Score=145.28 Aligned_cols=198 Identities=14% Similarity=0.064 Sum_probs=130.2
Q ss_pred cCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 010075 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (519)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (519)
+++++|+||||||+||+.++++|++.| .+|.+..|+... .+++.++ ..++.+
T Consensus 3 ~~~~~ilVtGasggiG~~la~~l~~~G---~~v~~~~r~~~~---~~~~~~~----------------------~~~~~~ 54 (273)
T PRK07825 3 LRGKVVAITGGARGIGLATARALAALG---ARVAIGDLDEAL---AKETAAE----------------------LGLVVG 54 (273)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCC---CEEEEEECCHHH---HHHHHHH----------------------hccceE
Confidence 457899999999999999999999988 567888775422 1111110 024678
Q ss_pred EeccCCCCCCCCChhhhHHHHhcCccEEEEcCccCCc-------cccHHHHHHHhHHHHHHHHHHHHhc---cCCceEEE
Q 010075 90 VPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKC---VKLKVFVH 159 (519)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~~~vdiViH~Aa~v~f-------~~~~~~~~~~Nv~gt~~ll~~a~~~---~~l~~~V~ 159 (519)
+.+|+++++---...+........+|++||+||.... .+.++..+++|+.|+..+.+.+... .+..++|+
T Consensus 55 ~~~D~~~~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~g~iv~ 134 (273)
T PRK07825 55 GPLDVTDPASFAAFLDAVEADLGPIDVLVNNAGVMPVGPFLDEPDAVTRRILDVNVYGVILGSKLAAPRMVPRGRGHVVN 134 (273)
T ss_pred EEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCEEEE
Confidence 9999996421000001111223468999999997542 1346777999999998887766431 25568999
Q ss_pred EecceeecCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcHHHHHHHHHH
Q 010075 160 VSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGE 239 (519)
Q Consensus 160 vSTa~v~~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~Y~~sK~~aE 239 (519)
+||....... +....|+.||+..+
T Consensus 135 isS~~~~~~~--------------------------------------------------------~~~~~Y~asKaa~~ 158 (273)
T PRK07825 135 VASLAGKIPV--------------------------------------------------------PGMATYCASKHAVV 158 (273)
T ss_pred EcCccccCCC--------------------------------------------------------CCCcchHHHHHHHH
Confidence 9997543211 12346999998777
Q ss_pred HHHHHh-----hcCCcEEEEecCccccCCCCCCCcccccccccHHHHHHhhcCCceeeccCCCceeeeeeHHHHHHHHHH
Q 010075 240 MLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMIV 314 (519)
Q Consensus 240 ~lv~~~-----~~~lp~~IvRPs~V~g~~~~p~~gw~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~d~vpVDdva~aii~ 314 (519)
.+.+.. ..++++++++|+.+-.+..... ........++++|+|++++.
T Consensus 159 ~~~~~l~~el~~~gi~v~~v~Pg~v~t~~~~~~---------------------------~~~~~~~~~~~~~va~~~~~ 211 (273)
T PRK07825 159 GFTDAARLELRGTGVHVSVVLPSFVNTELIAGT---------------------------GGAKGFKNVEPEDVAAAIVG 211 (273)
T ss_pred HHHHHHHHHhhccCcEEEEEeCCcCcchhhccc---------------------------ccccCCCCCCHHHHHHHHHH
Confidence 665443 4589999999998755422100 00011236889999999999
Q ss_pred HHHH
Q 010075 315 AMVA 318 (519)
Q Consensus 315 a~~~ 318 (519)
++.+
T Consensus 212 ~l~~ 215 (273)
T PRK07825 212 TVAK 215 (273)
T ss_pred HHhC
Confidence 8863
|
|
| >PRK07985 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=99.63 E-value=2.7e-14 Score=143.88 Aligned_cols=230 Identities=15% Similarity=0.131 Sum_probs=145.5
Q ss_pred cCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 010075 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (519)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (519)
+++|+++||||+|+||+++++.|++.| .+|++..|+..... .+.+.+. + ++ ...++.+
T Consensus 47 ~~~k~vlITGas~gIG~aia~~L~~~G---~~Vi~~~~~~~~~~-~~~~~~~---------~-~~--------~~~~~~~ 104 (294)
T PRK07985 47 LKDRKALVTGGDSGIGRAAAIAYAREG---ADVAISYLPVEEED-AQDVKKI---------I-EE--------CGRKAVL 104 (294)
T ss_pred cCCCEEEEECCCCcHHHHHHHHHHHCC---CEEEEecCCcchhh-HHHHHHH---------H-HH--------cCCeEEE
Confidence 678999999999999999999999998 56777666543221 2222211 0 01 0246788
Q ss_pred EeccCCCCCCCCChhhhHHHHhcCccEEEEcCccCC----c----cccHHHHHHHhHHHHHHHHHHHHhc-cCCceEEEE
Q 010075 90 VPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITK----F----DERYDVAFGINTLGVIHLVNFAKKC-VKLKVFVHV 160 (519)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~~~vdiViH~Aa~v~----f----~~~~~~~~~~Nv~gt~~ll~~a~~~-~~l~~~V~v 160 (519)
+.+|+++++......+.......++|++||+|+... + .+.++..+++|+.|+..+++.+... ..-.++|++
T Consensus 105 ~~~Dl~~~~~~~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~iv~i 184 (294)
T PRK07985 105 LPGDLSDEKFARSLVHEAHKALGGLDIMALVAGKQVAIPDIADLTSEQFQKTFAINVFALFWLTQEAIPLLPKGASIITT 184 (294)
T ss_pred EEccCCCHHHHHHHHHHHHHHhCCCCEEEECCCCCcCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhhcCCEEEEE
Confidence 999999632100000011112346899999998632 1 2467788999999999999888652 233689999
Q ss_pred ecceeecCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcHHHHHHHHHHH
Q 010075 161 STAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEM 240 (519)
Q Consensus 161 STa~v~~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~Y~~sK~~aE~ 240 (519)
||...+... .....|+.||+..+.
T Consensus 185 SS~~~~~~~--------------------------------------------------------~~~~~Y~asKaal~~ 208 (294)
T PRK07985 185 SSIQAYQPS--------------------------------------------------------PHLLDYAATKAAILN 208 (294)
T ss_pred CCchhccCC--------------------------------------------------------CCcchhHHHHHHHHH
Confidence 998654321 112469999999988
Q ss_pred HHHHh-----hcCCcEEEEecCccccCCCCCCCcccccccccHHHHHHhhcCCceeeccCCCceeeeeeHHHHHHHHHHH
Q 010075 241 LMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMIVA 315 (519)
Q Consensus 241 lv~~~-----~~~lp~~IvRPs~V~g~~~~p~~gw~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~d~vpVDdva~aii~a 315 (519)
+++.. ..++++..++||.|.++.... +. ............. ....+...+|+|++++.+
T Consensus 209 l~~~la~el~~~gIrvn~i~PG~v~t~~~~~--~~-----~~~~~~~~~~~~~---------~~~r~~~pedva~~~~fL 272 (294)
T PRK07985 209 YSRGLAKQVAEKGIRVNIVAPGPIWTALQIS--GG-----QTQDKIPQFGQQT---------PMKRAGQPAELAPVYVYL 272 (294)
T ss_pred HHHHHHHHHhHhCcEEEEEECCcCccccccc--cC-----CCHHHHHHHhccC---------CCCCCCCHHHHHHHHHhh
Confidence 87755 358999999999998875311 00 0111111111110 112345678999999988
Q ss_pred HHHhccCCCCCcEEEecCC
Q 010075 316 MVAHAKQPSDANIYHVGSS 334 (519)
Q Consensus 316 ~~~~~~~~~~~~iyni~s~ 334 (519)
+..... .-.+.++.+.+|
T Consensus 273 ~s~~~~-~itG~~i~vdgG 290 (294)
T PRK07985 273 ASQESS-YVTAEVHGVCGG 290 (294)
T ss_pred hChhcC-CccccEEeeCCC
Confidence 864322 223577888766
|
|
| >PRK07814 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.63 E-value=3.3e-14 Score=140.66 Aligned_cols=221 Identities=13% Similarity=0.083 Sum_probs=144.1
Q ss_pred cCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 010075 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (519)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (519)
+++++++||||||+||+++++.|++.| .+|+++.|+... .+.+.++ ++. ...++.+
T Consensus 8 ~~~~~vlItGasggIG~~~a~~l~~~G---~~Vi~~~r~~~~---~~~~~~~---------l~~---------~~~~~~~ 63 (263)
T PRK07814 8 LDDQVAVVTGAGRGLGAAIALAFAEAG---ADVLIAARTESQ---LDEVAEQ---------IRA---------AGRRAHV 63 (263)
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHCC---CEEEEEeCCHHH---HHHHHHH---------HHh---------cCCcEEE
Confidence 578999999999999999999999988 578899887422 1222111 111 0246888
Q ss_pred EeccCCCCCCCCChhhhHHHHh-------cCccEEEEcCccCCc-------cccHHHHHHHhHHHHHHHHHHHHhc----
Q 010075 90 VPGDISSEDLGLKDSNLKEELW-------NELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKC---- 151 (519)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~-------~~vdiViH~Aa~v~f-------~~~~~~~~~~Nv~gt~~ll~~a~~~---- 151 (519)
+.+|++++ +....++ .++|+|||+|+.... .+.++..+.+|+.|+.++++.+...
T Consensus 64 ~~~D~~~~-------~~~~~~~~~~~~~~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~ 136 (263)
T PRK07814 64 VAADLAHP-------EATAGLAGQAVEAFGRLDIVVNNVGGTMPNPLLSTSTKDLADAFTFNVATAHALTVAAVPLMLEH 136 (263)
T ss_pred EEccCCCH-------HHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHhhcHHHHHHHHHHHHHHHhh
Confidence 99999953 2222222 368999999986432 2456778999999999999998641
Q ss_pred cCCceEEEEecceeecCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcHH
Q 010075 152 VKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTY 231 (519)
Q Consensus 152 ~~l~~~V~vSTa~v~~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~Y 231 (519)
.+..++|++||....... .....|
T Consensus 137 ~~~g~iv~~sS~~~~~~~--------------------------------------------------------~~~~~Y 160 (263)
T PRK07814 137 SGGGSVINISSTMGRLAG--------------------------------------------------------RGFAAY 160 (263)
T ss_pred cCCeEEEEEccccccCCC--------------------------------------------------------CCCchh
Confidence 245789999996432110 224579
Q ss_pred HHHHHHHHHHHHHh----hcCCcEEEEecCccccCCCCCCCcccccccccHHHHHHhhcCCceeeccCCCceeeeeeHHH
Q 010075 232 VFTKTMGEMLMQQS----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDM 307 (519)
Q Consensus 232 ~~sK~~aE~lv~~~----~~~lp~~IvRPs~V~g~~~~p~~gw~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~d~vpVDd 307 (519)
+.||+..|.+++.. .+++.+..++||.|..+..... .++ ..+. ....+.. .......++|
T Consensus 161 ~~sK~a~~~~~~~~~~e~~~~i~v~~i~Pg~v~t~~~~~~---~~~----~~~~-~~~~~~~--------~~~~~~~~~~ 224 (263)
T PRK07814 161 GTAKAALAHYTRLAALDLCPRIRVNAIAPGSILTSALEVV---AAN----DELR-APMEKAT--------PLRRLGDPED 224 (263)
T ss_pred HHHHHHHHHHHHHHHHHHCCCceEEEEEeCCCcCchhhhc---cCC----HHHH-HHHHhcC--------CCCCCcCHHH
Confidence 99999999988865 3468899999998865432110 000 0111 1111110 1122467899
Q ss_pred HHHHHHHHHHHhccCCCCCcEEEecCC
Q 010075 308 VVNAMIVAMVAHAKQPSDANIYHVGSS 334 (519)
Q Consensus 308 va~aii~a~~~~~~~~~~~~iyni~s~ 334 (519)
+|++++.++.... ....+.++.+.++
T Consensus 225 va~~~~~l~~~~~-~~~~g~~~~~~~~ 250 (263)
T PRK07814 225 IAAAAVYLASPAG-SYLTGKTLEVDGG 250 (263)
T ss_pred HHHHHHHHcCccc-cCcCCCEEEECCC
Confidence 9999999885322 2223567777665
|
|
| >PRK06463 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.63 E-value=2.1e-14 Score=141.29 Aligned_cols=222 Identities=17% Similarity=0.172 Sum_probs=140.4
Q ss_pred cCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 010075 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (519)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (519)
+.+|+++||||+|+||+++++.|++.| .+|+++.|.... ..+.+. ..++.+
T Consensus 5 l~~k~~lItGas~gIG~~~a~~l~~~G---~~v~~~~~~~~~--~~~~l~------------------------~~~~~~ 55 (255)
T PRK06463 5 FKGKVALITGGTRGIGRAIAEAFLREG---AKVAVLYNSAEN--EAKELR------------------------EKGVFT 55 (255)
T ss_pred cCCCEEEEeCCCChHHHHHHHHHHHCC---CEEEEEeCCcHH--HHHHHH------------------------hCCCeE
Confidence 568999999999999999999999998 567776654321 111111 124678
Q ss_pred EeccCCCCCCCCChhhhHHHHh-------cCccEEEEcCccCCc-------cccHHHHHHHhHHHHHHHHHHHHh-c--c
Q 010075 90 VPGDISSEDLGLKDSNLKEELW-------NELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKK-C--V 152 (519)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~-------~~vdiViH~Aa~v~f-------~~~~~~~~~~Nv~gt~~ll~~a~~-~--~ 152 (519)
+.+|+++++ ..+.++ .++|+|||+||.... .+.++..+++|+.|+..+.+.+.+ + .
T Consensus 56 ~~~Dl~~~~-------~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~ 128 (255)
T PRK06463 56 IKCDVGNRD-------QVKKSKEVVEKEFGRVDVLVNNAGIMYLMPFEEFDEEKYNKMIKINLNGAIYTTYEFLPLLKLS 128 (255)
T ss_pred EEecCCCHH-------HHHHHHHHHHHHcCCCCEEEECCCcCCCCChhhCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhc
Confidence 999999632 222322 368999999987532 245677899999997665444322 1 2
Q ss_pred CCceEEEEecceeecCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcHHH
Q 010075 153 KLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYV 232 (519)
Q Consensus 153 ~l~~~V~vSTa~v~~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~Y~ 232 (519)
+..++|++||...++... .....|+
T Consensus 129 ~~g~iv~isS~~~~~~~~-------------------------------------------------------~~~~~Y~ 153 (255)
T PRK06463 129 KNGAIVNIASNAGIGTAA-------------------------------------------------------EGTTFYA 153 (255)
T ss_pred CCcEEEEEcCHHhCCCCC-------------------------------------------------------CCccHhH
Confidence 456899999976553210 1134699
Q ss_pred HHHHHHHHHHHHh-----hcCCcEEEEecCccccCCCCCCCcccccccccHHHHHHhhcCCceeeccCCCceeeeeeHHH
Q 010075 233 FTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDM 307 (519)
Q Consensus 233 ~sK~~aE~lv~~~-----~~~lp~~IvRPs~V~g~~~~p~~gw~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~d~vpVDd 307 (519)
.||+..+.+++.. ..++++..++||.|-.+....... . ............ ......+...++
T Consensus 154 asKaa~~~~~~~la~e~~~~~i~v~~i~Pg~v~t~~~~~~~~--~--~~~~~~~~~~~~---------~~~~~~~~~~~~ 220 (255)
T PRK06463 154 ITKAGIIILTRRLAFELGKYGIRVNAVAPGWVETDMTLSGKS--Q--EEAEKLRELFRN---------KTVLKTTGKPED 220 (255)
T ss_pred HHHHHHHHHHHHHHHHhhhcCeEEEEEeeCCCCCchhhcccC--c--cchHHHHHHHHh---------CCCcCCCcCHHH
Confidence 9999999888765 347999999999886553211000 0 000001111111 111233567899
Q ss_pred HHHHHHHHHHHhccCCCCCcEEEecCCCC
Q 010075 308 VVNAMIVAMVAHAKQPSDANIYHVGSSLR 336 (519)
Q Consensus 308 va~aii~a~~~~~~~~~~~~iyni~s~~~ 336 (519)
++++++.++..... .-.+.++.+.+|..
T Consensus 221 va~~~~~l~s~~~~-~~~G~~~~~dgg~~ 248 (255)
T PRK06463 221 IANIVLFLASDDAR-YITGQVIVADGGRI 248 (255)
T ss_pred HHHHHHHHcChhhc-CCCCCEEEECCCee
Confidence 99999998754322 22367888877644
|
|
| >PRK09730 putative NAD(P)-binding oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=99.63 E-value=2.4e-14 Score=139.76 Aligned_cols=218 Identities=16% Similarity=0.080 Sum_probs=135.6
Q ss_pred CEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEE-ecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEEe
Q 010075 13 KTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFV-RAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVP 91 (519)
Q Consensus 13 k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~Lv-R~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v~ 91 (519)
++|+||||+||||++++++|++.| .+|+++. |+.. ..+.+.++ ++. ...++..+.
T Consensus 2 ~~~lItGa~g~iG~~l~~~l~~~g---~~v~~~~~~~~~---~~~~~~~~---------~~~---------~~~~~~~~~ 57 (247)
T PRK09730 2 AIALVTGGSRGIGRATALLLAQEG---YTVAVNYQQNLH---AAQEVVNL---------ITQ---------AGGKAFVLQ 57 (247)
T ss_pred CEEEEeCCCchHHHHHHHHHHHCC---CEEEEEeCCChH---HHHHHHHH---------HHh---------CCCeEEEEE
Confidence 589999999999999999999988 4566543 4321 11111111 111 024578899
Q ss_pred ccCCCCCCCCChhhhHHHHh-------cCccEEEEcCccCCc--------cccHHHHHHHhHHHHHHHHHHHHhc-----
Q 010075 92 GDISSEDLGLKDSNLKEELW-------NELDIMVNSAAITKF--------DERYDVAFGINTLGVIHLVNFAKKC----- 151 (519)
Q Consensus 92 gDl~~~~lgls~~~~~~~l~-------~~vdiViH~Aa~v~f--------~~~~~~~~~~Nv~gt~~ll~~a~~~----- 151 (519)
+|+++++ ..+.++ ..+|+|||+|+.... .+.++..+++|+.|+..+++.+...
T Consensus 58 ~D~~d~~-------~i~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~ 130 (247)
T PRK09730 58 ADISDEN-------QVVAMFTAIDQHDEPLAALVNNAGILFTQCTVENLTAERINRVLSTNVTGYFLCCREAVKRMALKH 130 (247)
T ss_pred ccCCCHH-------HHHHHHHHHHHhCCCCCEEEECCCCCCCCCccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcC
Confidence 9999632 222332 358999999997522 1346678999999998887765432
Q ss_pred -cCCceEEEEecceeecCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcH
Q 010075 152 -VKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNT 230 (519)
Q Consensus 152 -~~l~~~V~vSTa~v~~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~ 230 (519)
.+..+||++||........ .....
T Consensus 131 ~~~~g~~v~~sS~~~~~~~~-------------------------------------------------------~~~~~ 155 (247)
T PRK09730 131 GGSGGAIVNVSSAASRLGAP-------------------------------------------------------GEYVD 155 (247)
T ss_pred CCCCcEEEEECchhhccCCC-------------------------------------------------------Ccccc
Confidence 1235699999975432110 11235
Q ss_pred HHHHHHHHHHHHHHh-----hcCCcEEEEecCccccCCCCCCCcccccccccHHHHHHhhcCCceeeccCCCceeeeeeH
Q 010075 231 YVFTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPV 305 (519)
Q Consensus 231 Y~~sK~~aE~lv~~~-----~~~lp~~IvRPs~V~g~~~~p~~gw~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~d~vpV 305 (519)
|+.+|+..|.+++.. ..+++++++||+.++++..... ...........+.. . ....+.
T Consensus 156 Y~~sK~~~~~~~~~l~~~~~~~~i~v~~i~pg~~~~~~~~~~--------~~~~~~~~~~~~~~----~-----~~~~~~ 218 (247)
T PRK09730 156 YAASKGAIDTLTTGLSLEVAAQGIRVNCVRPGFIYTEMHASG--------GEPGRVDRVKSNIP----M-----QRGGQP 218 (247)
T ss_pred hHhHHHHHHHHHHHHHHHHHHhCeEEEEEEeCCCcCcccccC--------CCHHHHHHHHhcCC----C-----CCCcCH
Confidence 999999999887754 3589999999999999854210 11111111111111 0 012368
Q ss_pred HHHHHHHHHHHHHhccCCCCCcEEEecCC
Q 010075 306 DMVVNAMIVAMVAHAKQPSDANIYHVGSS 334 (519)
Q Consensus 306 Ddva~aii~a~~~~~~~~~~~~iyni~s~ 334 (519)
+|++++++.++..... ...+.+|++.++
T Consensus 219 ~dva~~~~~~~~~~~~-~~~g~~~~~~g~ 246 (247)
T PRK09730 219 EEVAQAIVWLLSDKAS-YVTGSFIDLAGG 246 (247)
T ss_pred HHHHHHHHhhcChhhc-CccCcEEecCCC
Confidence 9999999988864322 123567777654
|
|
| >PRK10538 malonic semialdehyde reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.63 E-value=2.1e-14 Score=140.72 Aligned_cols=161 Identities=16% Similarity=0.219 Sum_probs=114.1
Q ss_pred CEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEEec
Q 010075 13 KTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVPG 92 (519)
Q Consensus 13 k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v~g 92 (519)
|+|+||||||++|++++++|++.| .+|+++.|+... .+.+. .+. ..++.++.+
T Consensus 1 ~~vlItGasg~iG~~la~~l~~~G---~~V~~~~r~~~~---~~~~~-------------~~~--------~~~~~~~~~ 53 (248)
T PRK10538 1 MIVLVTGATAGFGECITRRFIQQG---HKVIATGRRQER---LQELK-------------DEL--------GDNLYIAQL 53 (248)
T ss_pred CEEEEECCCchHHHHHHHHHHHCC---CEEEEEECCHHH---HHHHH-------------HHh--------ccceEEEEe
Confidence 579999999999999999999988 578888886432 11111 111 246888999
Q ss_pred cCCCCCCCCChhhhHHHHh-------cCccEEEEcCccCC----c----cccHHHHHHHhHHHHHHHHHHHHhc---cCC
Q 010075 93 DISSEDLGLKDSNLKEELW-------NELDIMVNSAAITK----F----DERYDVAFGINTLGVIHLVNFAKKC---VKL 154 (519)
Q Consensus 93 Dl~~~~lgls~~~~~~~l~-------~~vdiViH~Aa~v~----f----~~~~~~~~~~Nv~gt~~ll~~a~~~---~~l 154 (519)
|+++++ + .+.++ .++|+|||+||... + .+.++..+++|+.|+..+++.+.+. .+.
T Consensus 54 Dl~~~~------~-i~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~ 126 (248)
T PRK10538 54 DVRNRA------A-IEEMLASLPAEWRNIDVLVNNAGLALGLEPAHKASVEDWETMIDTNNKGLVYMTRAVLPGMVERNH 126 (248)
T ss_pred cCCCHH------H-HHHHHHHHHHHcCCCCEEEECCCccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCC
Confidence 999632 2 22222 36999999998642 1 2456778999999977766665321 256
Q ss_pred ceEEEEecceeecCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcHHHHH
Q 010075 155 KVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFT 234 (519)
Q Consensus 155 ~~~V~vSTa~v~~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~Y~~s 234 (519)
.++|++||...... + ...+.|+.+
T Consensus 127 ~~iv~isS~~~~~~---------~-----------------------------------------------~~~~~Y~~s 150 (248)
T PRK10538 127 GHIINIGSTAGSWP---------Y-----------------------------------------------AGGNVYGAT 150 (248)
T ss_pred cEEEEECCcccCCC---------C-----------------------------------------------CCCchhHHH
Confidence 78999999754211 0 123579999
Q ss_pred HHHHHHHHHHh-----hcCCcEEEEecCccccCC
Q 010075 235 KTMGEMLMQQS-----KENLSLVIIRPTVVSGTY 263 (519)
Q Consensus 235 K~~aE~lv~~~-----~~~lp~~IvRPs~V~g~~ 263 (519)
|...|.+.+.. ..++.+.+++||.+.++.
T Consensus 151 K~~~~~~~~~l~~~~~~~~i~v~~v~pg~i~~~~ 184 (248)
T PRK10538 151 KAFVRQFSLNLRTDLHGTAVRVTDIEPGLVGGTE 184 (248)
T ss_pred HHHHHHHHHHHHHHhcCCCcEEEEEeCCeecccc
Confidence 99999988765 347999999999997653
|
|
| >PRK07024 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.63 E-value=1.4e-14 Score=142.73 Aligned_cols=196 Identities=11% Similarity=0.143 Sum_probs=129.6
Q ss_pred CCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEEe
Q 010075 12 NKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVP 91 (519)
Q Consensus 12 ~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v~ 91 (519)
+|+|+||||||+||+++++.|++.| .+|+++.|+... .+++. ++.+. ..++.++.
T Consensus 2 ~~~vlItGas~gIG~~la~~l~~~G---~~v~~~~r~~~~---~~~~~-------------~~~~~------~~~~~~~~ 56 (257)
T PRK07024 2 PLKVFITGASSGIGQALAREYARQG---ATLGLVARRTDA---LQAFA-------------ARLPK------AARVSVYA 56 (257)
T ss_pred CCEEEEEcCCcHHHHHHHHHHHHCC---CEEEEEeCCHHH---HHHHH-------------Hhccc------CCeeEEEE
Confidence 4799999999999999999999988 578888886321 11111 11110 12688999
Q ss_pred ccCCCCCCCCChhhhHHHHhcCccEEEEcCccCCc----c----ccHHHHHHHhHHHHHHHHHHH----HhccCCceEEE
Q 010075 92 GDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF----D----ERYDVAFGINTLGVIHLVNFA----KKCVKLKVFVH 159 (519)
Q Consensus 92 gDl~~~~lgls~~~~~~~l~~~vdiViH~Aa~v~f----~----~~~~~~~~~Nv~gt~~ll~~a----~~~~~l~~~V~ 159 (519)
+|+++++......+........+|++||+||.... . +.++..+++|+.|+..+++.. ++. +..++|+
T Consensus 57 ~Dl~~~~~i~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~l~~~~~~-~~~~iv~ 135 (257)
T PRK07024 57 ADVRDADALAAAAADFIAAHGLPDVVIANAGISVGTLTEEREDLAVFREVMDTNYFGMVATFQPFIAPMRAA-RRGTLVG 135 (257)
T ss_pred cCCCCHHHHHHHHHHHHHhCCCCCEEEECCCcCCCccccccCCHHHHHHHHhHhcHHHHHHHHHHHHHHHhc-CCCEEEE
Confidence 99996431100000001112348999999997431 1 346778999999999987743 332 4578999
Q ss_pred EecceeecCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcHHHHHHHHHH
Q 010075 160 VSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGE 239 (519)
Q Consensus 160 vSTa~v~~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~Y~~sK~~aE 239 (519)
+||....... +....|+.||+..+
T Consensus 136 isS~~~~~~~--------------------------------------------------------~~~~~Y~asK~a~~ 159 (257)
T PRK07024 136 IASVAGVRGL--------------------------------------------------------PGAGAYSASKAAAI 159 (257)
T ss_pred EechhhcCCC--------------------------------------------------------CCCcchHHHHHHHH
Confidence 9987543211 12346999999999
Q ss_pred HHHHHh-----hcCCcEEEEecCccccCCCCCCCcccccccccHHHHHHhhcCCceeeccCCCceeeeeeHHHHHHHHHH
Q 010075 240 MLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMIV 314 (519)
Q Consensus 240 ~lv~~~-----~~~lp~~IvRPs~V~g~~~~p~~gw~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~d~vpVDdva~aii~ 314 (519)
.+++.. ..+++++++|||.|.++.... + + .. ....++.+++++.++.
T Consensus 160 ~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~------~-------------~-----~~----~~~~~~~~~~a~~~~~ 211 (257)
T PRK07024 160 KYLESLRVELRPAGVRVVTIAPGYIRTPMTAH------N-------------P-----YP----MPFLMDADRFAARAAR 211 (257)
T ss_pred HHHHHHHHHhhccCcEEEEEecCCCcCchhhc------C-------------C-----CC----CCCccCHHHHHHHHHH
Confidence 988654 358999999999997753210 0 0 00 0013689999999999
Q ss_pred HHH
Q 010075 315 AMV 317 (519)
Q Consensus 315 a~~ 317 (519)
++.
T Consensus 212 ~l~ 214 (257)
T PRK07024 212 AIA 214 (257)
T ss_pred HHh
Confidence 886
|
|
| >cd09071 FAR_C C-terminal domain of fatty acyl CoA reductases | Back alignment and domain information |
|---|
Probab=99.63 E-value=2.2e-16 Score=130.65 Aligned_cols=83 Identities=28% Similarity=0.484 Sum_probs=72.0
Q ss_pred HHHHHHHHHHHHhhhhH-------HHHHHHHHHhcccccccceEEechhHHHHHHHhcCCCCCCccccCCCCCCCHHHHH
Q 010075 348 TVFHNFFKGVYNDLRKK-------VKFVMRVVEIYKPYFYFNGIFDDTNTEKLRMTARGSRTETDLFYFDPDSIEWSDYF 420 (519)
Q Consensus 348 ~~~p~~~~~~~~~~~~~-------~~~~~~~~~~~~~f~~~~w~F~~~n~~~L~~~l~~~Dr~~~~F~fD~~~idW~~Y~ 420 (519)
+.+|+.+.|.+..+.|+ ..++.+..+++++|+.++|.|+++|+++|.+.|+++|++ +|+||++.|||++|+
T Consensus 3 ~~lpa~~~d~~~~l~g~~~~~~~~~~k~~~~~~~~~~Ft~~~w~F~~~n~~~L~~~l~~~Dr~--~F~fD~~~idW~~Y~ 80 (92)
T cd09071 3 HLLPAYLLDLLLRLLGRKPRLLKLYRKIHKLLDLLEYFTTNEWRFDNDNTRALWERLSEEDRE--LFNFDIRSIDWDDYF 80 (92)
T ss_pred ccchHHHHHHHHHHhCCChHHHHHHHHHHHHHHHhhccccCeEEeeCcHHHHHHHHCCHHHHH--hCCCCCCCCCHHHHH
Confidence 34677777777666554 344667788899999999999999999999999999977 999999999999999
Q ss_pred hhcchhhHHHHHh
Q 010075 421 MNTHIPGVEKLLQ 433 (519)
Q Consensus 421 ~~~~~~Girkyll 433 (519)
+++ ++|+|+|++
T Consensus 81 ~~~-~~G~r~yll 92 (92)
T cd09071 81 ENY-IPGLRKYLL 92 (92)
T ss_pred HHH-HHHHHHHhC
Confidence 997 999999985
|
C-terminal domain of fatty acyl CoA reductases, a family of SDR-like proteins. SDRs or short-chain dehydrogenases/reductases are Rossmann-fold NAD(P)H-binding proteins. Many proteins in this FAR_C family may function as fatty acyl-CoA reductases (FARs), acting on medium and long chain fatty acids, and have been reported to be involved in diverse processes such as the biosynthesis of insect pheromones, plant cuticular wax production, and mammalian wax biosynthesis. In Arabidopsis thaliana, proteins with this particular architecture have also been identified as the MALE STERILITY 2 (MS2) gene product, which is implicated in male gametogenesis. Mutations in MS2 inhibit the synthesis of exine (sporopollenin), rendering plants unable to reduce pollen wall fatty acids to corresponding alcohols. The function of this C-terminal domain is unclear. |
| >PRK07454 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.62 E-value=1.3e-14 Score=141.31 Aligned_cols=205 Identities=13% Similarity=0.094 Sum_probs=135.0
Q ss_pred CCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEE
Q 010075 11 ENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFV 90 (519)
Q Consensus 11 ~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v 90 (519)
++|+++||||||++|+.+++.|++.| .+|+++.|+... .+++.++ +++ ...++.++
T Consensus 5 ~~k~vlItG~sg~iG~~la~~l~~~G---~~V~~~~r~~~~---~~~~~~~---------~~~---------~~~~~~~~ 60 (241)
T PRK07454 5 SMPRALITGASSGIGKATALAFAKAG---WDLALVARSQDA---LEALAAE---------LRS---------TGVKAAAY 60 (241)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCC---CEEEEEeCCHHH---HHHHHHH---------HHh---------CCCcEEEE
Confidence 46899999999999999999999988 578999987532 1222211 111 12468899
Q ss_pred eccCCCCCCCCChhhhHHHHhcCccEEEEcCccCCc-------cccHHHHHHHhHHHHHHHHHHHHhc---cCCceEEEE
Q 010075 91 PGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKC---VKLKVFVHV 160 (519)
Q Consensus 91 ~gDl~~~~lgls~~~~~~~l~~~vdiViH~Aa~v~f-------~~~~~~~~~~Nv~gt~~ll~~a~~~---~~l~~~V~v 160 (519)
.+|+++++.-....+...+...++|+|||+|+.... .+.++..+++|+.|+.++++.+... .+..++|++
T Consensus 61 ~~D~~~~~~~~~~~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~i 140 (241)
T PRK07454 61 SIDLSNPEAIAPGIAELLEQFGCPDVLINNAGMAYTGPLLEMPLSDWQWVIQLNLTSVFQCCSAVLPGMRARGGGLIINV 140 (241)
T ss_pred EccCCCHHHHHHHHHHHHHHcCCCCEEEECCCccCCCchhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCcEEEEE
Confidence 999996421000000000112359999999997532 1356777899999998887776331 245789999
Q ss_pred ecceeecCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcHHHHHHHHHHH
Q 010075 161 STAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEM 240 (519)
Q Consensus 161 STa~v~~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~Y~~sK~~aE~ 240 (519)
||...+... .....|+.||+..+.
T Consensus 141 sS~~~~~~~--------------------------------------------------------~~~~~Y~~sK~~~~~ 164 (241)
T PRK07454 141 SSIAARNAF--------------------------------------------------------PQWGAYCVSKAALAA 164 (241)
T ss_pred ccHHhCcCC--------------------------------------------------------CCccHHHHHHHHHHH
Confidence 998665321 123569999999998
Q ss_pred HHHHh-----hcCCcEEEEecCccccCCCCCCCcccccccccHHHHHHhhcCCceeeccCCCceeeeeeHHHHHHHHHHH
Q 010075 241 LMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMIVA 315 (519)
Q Consensus 241 lv~~~-----~~~lp~~IvRPs~V~g~~~~p~~gw~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~d~vpVDdva~aii~a 315 (519)
+++.. ..++++.++||+.+-.+.... . .. .. .. ...-.++.+|+|++++.+
T Consensus 165 ~~~~~a~e~~~~gi~v~~i~pg~i~t~~~~~------~--~~--------~~---~~-----~~~~~~~~~~va~~~~~l 220 (241)
T PRK07454 165 FTKCLAEEERSHGIRVCTITLGAVNTPLWDT------E--TV--------QA---DF-----DRSAMLSPEQVAQTILHL 220 (241)
T ss_pred HHHHHHHHhhhhCCEEEEEecCcccCCcccc------c--cc--------cc---cc-----ccccCCCHHHHHHHHHHH
Confidence 87654 348999999999987653210 0 00 00 00 001247899999999999
Q ss_pred HHHh
Q 010075 316 MVAH 319 (519)
Q Consensus 316 ~~~~ 319 (519)
+..+
T Consensus 221 ~~~~ 224 (241)
T PRK07454 221 AQLP 224 (241)
T ss_pred HcCC
Confidence 8643
|
|
| >PRK12744 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.62 E-value=3.9e-14 Score=139.51 Aligned_cols=228 Identities=13% Similarity=0.148 Sum_probs=141.8
Q ss_pred cCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecC-CcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceE
Q 010075 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAA-DIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKIT 88 (519)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~-~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~ 88 (519)
+++|+++||||+|+||++++++|++.| .+|+++.+.. ......+++.+++ .. ...++.
T Consensus 6 l~~k~vlItGa~~gIG~~~a~~l~~~G---~~vv~i~~~~~~~~~~~~~~~~~l---------~~---------~~~~~~ 64 (257)
T PRK12744 6 LKGKVVLIAGGAKNLGGLIARDLAAQG---AKAVAIHYNSAASKADAEETVAAV---------KA---------AGAKAV 64 (257)
T ss_pred CCCcEEEEECCCchHHHHHHHHHHHCC---CcEEEEecCCccchHHHHHHHHHH---------HH---------hCCcEE
Confidence 468999999999999999999999988 4555665543 2222222222111 11 024678
Q ss_pred EEeccCCCCCCCCChhhhHHHHh-------cCccEEEEcCccCCc-------cccHHHHHHHhHHHHHHHHHHHHh-ccC
Q 010075 89 FVPGDISSEDLGLKDSNLKEELW-------NELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKK-CVK 153 (519)
Q Consensus 89 ~v~gDl~~~~lgls~~~~~~~l~-------~~vdiViH~Aa~v~f-------~~~~~~~~~~Nv~gt~~ll~~a~~-~~~ 153 (519)
.+.+|++++. ..+.++ .++|++||+||.... .+.++..+++|+.|+..+++.+.+ +..
T Consensus 65 ~~~~D~~~~~-------~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~ 137 (257)
T PRK12744 65 AFQADLTTAA-------AVEKLFDDAKAAFGRPDIAINTVGKVLKKPIVEISEAEYDEMFAVNSKSAFFFIKEAGRHLND 137 (257)
T ss_pred EEecCcCCHH-------HHHHHHHHHHHhhCCCCEEEECCcccCCCCcccCCHHHHHHHHhhhhhHHHHHHHHHHHhhcc
Confidence 8999999632 222322 368999999997421 135777899999999999888764 322
Q ss_pred CceEEEEecceeecCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcHHHH
Q 010075 154 LKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVF 233 (519)
Q Consensus 154 l~~~V~vSTa~v~~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~Y~~ 233 (519)
..++++++|..+.... +....|+.
T Consensus 138 ~~~iv~~~ss~~~~~~--------------------------------------------------------~~~~~Y~~ 161 (257)
T PRK12744 138 NGKIVTLVTSLLGAFT--------------------------------------------------------PFYSAYAG 161 (257)
T ss_pred CCCEEEEecchhcccC--------------------------------------------------------CCcccchh
Confidence 3467766443322110 12356999
Q ss_pred HHHHHHHHHHHh-----hcCCcEEEEecCccccCCCCCCCcccccccccHHHHHHhhcCCceeeccCCCceeeeeeHHHH
Q 010075 234 TKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMV 308 (519)
Q Consensus 234 sK~~aE~lv~~~-----~~~lp~~IvRPs~V~g~~~~p~~gw~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~d~vpVDdv 308 (519)
||+..|.+++.+ ..+++++.++||.+.++...+..+ ..... .... . ....+.....+.+++|+
T Consensus 162 sK~a~~~~~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~-------~~~~~--~~~~-~--~~~~~~~~~~~~~~~dv 229 (257)
T PRK12744 162 SKAPVEHFTRAASKEFGARGISVTAVGPGPMDTPFFYPQEG-------AEAVA--YHKT-A--AALSPFSKTGLTDIEDI 229 (257)
T ss_pred hHHHHHHHHHHHHHHhCcCceEEEEEecCccccchhccccc-------cchhh--cccc-c--ccccccccCCCCCHHHH
Confidence 999999998876 236999999999997764322111 00000 0000 0 00111112246789999
Q ss_pred HHHHHHHHHHhccCCCCCcEEEecCCC
Q 010075 309 VNAMIVAMVAHAKQPSDANIYHVGSSL 335 (519)
Q Consensus 309 a~aii~a~~~~~~~~~~~~iyni~s~~ 335 (519)
|+++..++.. . ..-.++++++.+|.
T Consensus 230 a~~~~~l~~~-~-~~~~g~~~~~~gg~ 254 (257)
T PRK12744 230 VPFIRFLVTD-G-WWITGQTILINGGY 254 (257)
T ss_pred HHHHHHhhcc-c-ceeecceEeecCCc
Confidence 9999998863 2 11126788888763
|
|
| >PRK12747 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.62 E-value=3.8e-14 Score=139.17 Aligned_cols=226 Identities=12% Similarity=0.115 Sum_probs=141.3
Q ss_pred cCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 010075 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (519)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (519)
+++|+++||||+|+||++++++|++.| .+|.+..+.... ..+.+.. .+... ..++..
T Consensus 2 ~~~k~~lItGas~gIG~~ia~~l~~~G---~~v~~~~~~~~~--~~~~~~~---------~~~~~---------~~~~~~ 58 (252)
T PRK12747 2 LKGKVALVTGASRGIGRAIAKRLANDG---ALVAIHYGNRKE--EAEETVY---------EIQSN---------GGSAFS 58 (252)
T ss_pred CCCCEEEEeCCCChHHHHHHHHHHHCC---CeEEEEcCCCHH--HHHHHHH---------HHHhc---------CCceEE
Confidence 568999999999999999999999998 556665433211 1111111 11111 245678
Q ss_pred EeccCCCCCCCCChhhhHHHHh---------cCccEEEEcCccCCc---c----ccHHHHHHHhHHHHHHHHHHHHh-cc
Q 010075 90 VPGDISSEDLGLKDSNLKEELW---------NELDIMVNSAAITKF---D----ERYDVAFGINTLGVIHLVNFAKK-CV 152 (519)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~---------~~vdiViH~Aa~v~f---~----~~~~~~~~~Nv~gt~~ll~~a~~-~~ 152 (519)
+.+|+++..- .....+.+. .++|++||+||.... . +.++..+++|+.|+..+++.+.. +.
T Consensus 59 ~~~D~~~~~~---~~~~~~~~~~~~~~~~g~~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~ 135 (252)
T PRK12747 59 IGANLESLHG---VEALYSSLDNELQNRTGSTKFDILINNAGIGPGAFIEETTEQFFDRMVSVNAKAPFFIIQQALSRLR 135 (252)
T ss_pred EecccCCHHH---HHHHHHHHHHHhhhhcCCCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHhh
Confidence 8899986421 111111111 269999999996421 1 34678889999999999987654 33
Q ss_pred CCceEEEEecceeecCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcHHH
Q 010075 153 KLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYV 232 (519)
Q Consensus 153 ~l~~~V~vSTa~v~~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~Y~ 232 (519)
+-.++|++||....... .....|+
T Consensus 136 ~~g~iv~isS~~~~~~~--------------------------------------------------------~~~~~Y~ 159 (252)
T PRK12747 136 DNSRIINISSAATRISL--------------------------------------------------------PDFIAYS 159 (252)
T ss_pred cCCeEEEECCcccccCC--------------------------------------------------------CCchhHH
Confidence 33589999998654211 1235699
Q ss_pred HHHHHHHHHHHHh-----hcCCcEEEEecCccccCCCCCCCcccccccccHHHHHHhhcCCceeeccCCCceeeeeeHHH
Q 010075 233 FTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDM 307 (519)
Q Consensus 233 ~sK~~aE~lv~~~-----~~~lp~~IvRPs~V~g~~~~p~~gw~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~d~vpVDd 307 (519)
.||+..+.+++.. ..++++..+.||.|.++..... ... ......... ......+..++|
T Consensus 160 ~sKaa~~~~~~~la~e~~~~girvn~v~Pg~v~t~~~~~~---~~~-----~~~~~~~~~--------~~~~~~~~~~~d 223 (252)
T PRK12747 160 MTKGAINTMTFTLAKQLGARGITVNAILPGFIKTDMNAEL---LSD-----PMMKQYATT--------ISAFNRLGEVED 223 (252)
T ss_pred HHHHHHHHHHHHHHHHHhHcCCEEEEEecCCccCchhhhc---ccC-----HHHHHHHHh--------cCcccCCCCHHH
Confidence 9999999888764 4579999999999987643211 000 011111110 001123678899
Q ss_pred HHHHHHHHHHHhccCCCCCcEEEecCC
Q 010075 308 VVNAMIVAMVAHAKQPSDANIYHVGSS 334 (519)
Q Consensus 308 va~aii~a~~~~~~~~~~~~iyni~s~ 334 (519)
+|+++..++.... ..-.+.++.+.+|
T Consensus 224 va~~~~~l~s~~~-~~~~G~~i~vdgg 249 (252)
T PRK12747 224 IADTAAFLASPDS-RWVTGQLIDVSGG 249 (252)
T ss_pred HHHHHHHHcCccc-cCcCCcEEEecCC
Confidence 9999988875322 1123567777665
|
|
| >PRK08226 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.62 E-value=4.5e-14 Score=139.44 Aligned_cols=228 Identities=17% Similarity=0.118 Sum_probs=143.3
Q ss_pred cCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 010075 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (519)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (519)
+.+++++||||||+||+++++.|++.| .+|+++.|+.......+.+ +. ...++.+
T Consensus 4 ~~~~~~lItG~s~giG~~la~~l~~~G---~~Vv~~~r~~~~~~~~~~~-------------~~---------~~~~~~~ 58 (263)
T PRK08226 4 LTGKTALITGALQGIGEGIARVFARHG---ANLILLDISPEIEKLADEL-------------CG---------RGHRCTA 58 (263)
T ss_pred CCCCEEEEeCCCChHHHHHHHHHHHCC---CEEEEecCCHHHHHHHHHH-------------HH---------hCCceEE
Confidence 568999999999999999999999988 5788888864211111111 11 0246788
Q ss_pred EeccCCCCCCCCChhhhHHHH-------hcCccEEEEcCccCCc-------cccHHHHHHHhHHHHHHHHHHHHhc---c
Q 010075 90 VPGDISSEDLGLKDSNLKEEL-------WNELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKC---V 152 (519)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l-------~~~vdiViH~Aa~v~f-------~~~~~~~~~~Nv~gt~~ll~~a~~~---~ 152 (519)
+.+|++++. + .+.+ ...+|+|||+|+.... .+.++..+++|+.|+..+++.+... .
T Consensus 59 ~~~Dl~~~~------~-v~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~ 131 (263)
T PRK08226 59 VVADVRDPA------S-VAAAIKRAKEKEGRIDILVNNAGVCRLGSFLDMSDEDRDFHIDINIKGVWNVTKAVLPEMIAR 131 (263)
T ss_pred EECCCCCHH------H-HHHHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhc
Confidence 999999632 2 2233 2368999999997533 1345667999999999998886542 2
Q ss_pred CCceEEEEecceeecCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcHHH
Q 010075 153 KLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYV 232 (519)
Q Consensus 153 ~l~~~V~vSTa~v~~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~Y~ 232 (519)
+..++|++||........ .....|+
T Consensus 132 ~~~~iv~isS~~~~~~~~-------------------------------------------------------~~~~~Y~ 156 (263)
T PRK08226 132 KDGRIVMMSSVTGDMVAD-------------------------------------------------------PGETAYA 156 (263)
T ss_pred CCcEEEEECcHHhcccCC-------------------------------------------------------CCcchHH
Confidence 446899999864321000 1134699
Q ss_pred HHHHHHHHHHHHh-----hcCCcEEEEecCccccCCCCCCCcccccccccHHHHHHhhcCCceeeccCCCceeeeeeHHH
Q 010075 233 FTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDM 307 (519)
Q Consensus 233 ~sK~~aE~lv~~~-----~~~lp~~IvRPs~V~g~~~~p~~gw~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~d~vpVDd 307 (519)
.+|+..|.+++.+ ..++.+..++||.|.++......+... .......+.....+. ....+.+.+|
T Consensus 157 ~sK~a~~~~~~~la~~~~~~~i~v~~i~pg~v~t~~~~~~~~~~~-~~~~~~~~~~~~~~~---------p~~~~~~~~~ 226 (263)
T PRK08226 157 LTKAAIVGLTKSLAVEYAQSGIRVNAICPGYVRTPMAESIARQSN-PEDPESVLTEMAKAI---------PLRRLADPLE 226 (263)
T ss_pred HHHHHHHHHHHHHHHHhcccCcEEEEEecCcccCHHHHhhhhhcc-CCCcHHHHHHHhccC---------CCCCCCCHHH
Confidence 9999998888755 347999999999998764322111100 011112222222211 1123468899
Q ss_pred HHHHHHHHHHHhccCCCCCcEEEecCCC
Q 010075 308 VVNAMIVAMVAHAKQPSDANIYHVGSSL 335 (519)
Q Consensus 308 va~aii~a~~~~~~~~~~~~iyni~s~~ 335 (519)
++++++.++..... .-.++++-+.+|.
T Consensus 227 va~~~~~l~~~~~~-~~~g~~i~~dgg~ 253 (263)
T PRK08226 227 VGELAAFLASDESS-YLTGTQNVIDGGS 253 (263)
T ss_pred HHHHHHHHcCchhc-CCcCceEeECCCc
Confidence 99998887753221 1135566666553
|
|
| >TIGR01830 3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) reductase | Back alignment and domain information |
|---|
Probab=99.62 E-value=5.8e-14 Score=136.21 Aligned_cols=214 Identities=18% Similarity=0.213 Sum_probs=139.6
Q ss_pred EEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEEeccC
Q 010075 15 ILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVPGDI 94 (519)
Q Consensus 15 VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v~gDl 94 (519)
|+|||++|+||+.+++.|++.| .+|+++.|+.... .+.+.+. +.. . ..++.++.+|+
T Consensus 1 vlItG~~g~iG~~la~~l~~~G---~~v~~~~r~~~~~--~~~~~~~---------~~~-~--------~~~~~~~~~D~ 57 (239)
T TIGR01830 1 ALVTGASRGIGRAIALKLAKEG---AKVIITYRSSEEG--AEEVVEE---------LKA-Y--------GVKALGVVCDV 57 (239)
T ss_pred CEEECCCcHHHHHHHHHHHHCC---CEEEEEeCCchhH--HHHHHHH---------HHh-c--------CCceEEEEecC
Confidence 6899999999999999999988 5788888865211 1111111 111 1 13578999999
Q ss_pred CCCCCCCChhhhHHHHh-------cCccEEEEcCccCCc-------cccHHHHHHHhHHHHHHHHHHHHhc---cCCceE
Q 010075 95 SSEDLGLKDSNLKEELW-------NELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKC---VKLKVF 157 (519)
Q Consensus 95 ~~~~lgls~~~~~~~l~-------~~vdiViH~Aa~v~f-------~~~~~~~~~~Nv~gt~~ll~~a~~~---~~l~~~ 157 (519)
+++ +..+.++ ..+|+|||+|+.... .+.++..+++|+.++..+++.+.+. ++.++|
T Consensus 58 ~~~-------~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~ 130 (239)
T TIGR01830 58 SDR-------EDVKAVVEEIEEELGPIDILVNNAGITRDNLLMRMKEEDWDAVIDTNLTGVFNLTQAVLRIMIKQRSGRI 130 (239)
T ss_pred CCH-------HHHHHHHHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEE
Confidence 963 2222332 358999999998642 1456777999999999999988653 245689
Q ss_pred EEEeccee-ecCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcHHHHHHH
Q 010075 158 VHVSTAYV-AGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKT 236 (519)
Q Consensus 158 V~vSTa~v-~~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~Y~~sK~ 236 (519)
+++||... ++. +....|+.+|.
T Consensus 131 v~~sS~~~~~g~---------------------------------------------------------~~~~~y~~~k~ 153 (239)
T TIGR01830 131 INISSVVGLMGN---------------------------------------------------------AGQANYAASKA 153 (239)
T ss_pred EEECCccccCCC---------------------------------------------------------CCCchhHHHHH
Confidence 99999643 321 12356999999
Q ss_pred HHHHHHHHh-----hcCCcEEEEecCccccCCCCCCCcccccccccHHHHHHhhcCCceeeccCCCceeeeeeHHHHHHH
Q 010075 237 MGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNA 311 (519)
Q Consensus 237 ~aE~lv~~~-----~~~lp~~IvRPs~V~g~~~~p~~gw~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~d~vpVDdva~a 311 (519)
..+.+++.. ..+++++++||+.+.++...+.+ ............ ..-+.+++|++++
T Consensus 154 a~~~~~~~l~~~~~~~g~~~~~i~pg~~~~~~~~~~~---------~~~~~~~~~~~~---------~~~~~~~~~~a~~ 215 (239)
T TIGR01830 154 GVIGFTKSLAKELASRNITVNAVAPGFIDTDMTDKLS---------EKVKKKILSQIP---------LGRFGTPEEVANA 215 (239)
T ss_pred HHHHHHHHHHHHHhhcCeEEEEEEECCCCChhhhhcC---------hHHHHHHHhcCC---------cCCCcCHHHHHHH
Confidence 888777654 35899999999987654322110 111111111100 1124578999999
Q ss_pred HHHHHHHhccCCCCCcEEEecCC
Q 010075 312 MIVAMVAHAKQPSDANIYHVGSS 334 (519)
Q Consensus 312 ii~a~~~~~~~~~~~~iyni~s~ 334 (519)
++.++.... ....+++||+++|
T Consensus 216 ~~~~~~~~~-~~~~g~~~~~~~g 237 (239)
T TIGR01830 216 VAFLASDEA-SYITGQVIHVDGG 237 (239)
T ss_pred HHHHhCccc-CCcCCCEEEeCCC
Confidence 988874322 1224689999765
|
This model represents 3-oxoacyl-[ACP] reductase, also called 3-ketoacyl-acyl carrier protein reductase, an enzyme of fatty acid biosynthesis. |
| >PRK07577 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.62 E-value=7.3e-14 Score=135.31 Aligned_cols=209 Identities=11% Similarity=0.065 Sum_probs=138.0
Q ss_pred CCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEE
Q 010075 11 ENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFV 90 (519)
Q Consensus 11 ~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v 90 (519)
.+|+|+||||||+||++++++|++.| .+|+++.|+.... ....++
T Consensus 2 ~~k~vlItG~s~~iG~~ia~~l~~~G---~~v~~~~r~~~~~--------------------------------~~~~~~ 46 (234)
T PRK07577 2 SSRTVLVTGATKGIGLALSLRLANLG---HQVIGIARSAIDD--------------------------------FPGELF 46 (234)
T ss_pred CCCEEEEECCCCcHHHHHHHHHHHCC---CEEEEEeCCcccc--------------------------------cCceEE
Confidence 57899999999999999999999988 6889998875321 011467
Q ss_pred eccCCCCCCCCChhhhHHHHhc------CccEEEEcCccCCc-------cccHHHHHHHhHHHHHHHHHHHHhc---cCC
Q 010075 91 PGDISSEDLGLKDSNLKEELWN------ELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKC---VKL 154 (519)
Q Consensus 91 ~gDl~~~~lgls~~~~~~~l~~------~vdiViH~Aa~v~f-------~~~~~~~~~~Nv~gt~~ll~~a~~~---~~l 154 (519)
.+|++++ +..+.+++ ++|+|||+|+.... .+.+...+++|+.|+.++.+.+... .+.
T Consensus 47 ~~D~~~~-------~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~ 119 (234)
T PRK07577 47 ACDLADI-------EQTAATLAQINEIHPVDAIVNNVGIALPQPLGKIDLAALQDVYDLNVRAAVQVTQAFLEGMKLREQ 119 (234)
T ss_pred EeeCCCH-------HHHHHHHHHHHHhCCCcEEEECCCCCCCCChHHCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCC
Confidence 8999963 22223332 58999999997543 2356677899999988887665431 256
Q ss_pred ceEEEEecceeecCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcHHHHH
Q 010075 155 KVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFT 234 (519)
Q Consensus 155 ~~~V~vSTa~v~~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~Y~~s 234 (519)
.++|++||...++.. ....|+.|
T Consensus 120 ~~iv~~sS~~~~~~~---------------------------------------------------------~~~~Y~~s 142 (234)
T PRK07577 120 GRIVNICSRAIFGAL---------------------------------------------------------DRTSYSAA 142 (234)
T ss_pred cEEEEEccccccCCC---------------------------------------------------------CchHHHHH
Confidence 799999998654321 13569999
Q ss_pred HHHHHHHHHHh-----hcCCcEEEEecCccccCCCCCCCcccccccccHHHHHHhhcCCceeeccCCCceeeeeeHHHHH
Q 010075 235 KTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVV 309 (519)
Q Consensus 235 K~~aE~lv~~~-----~~~lp~~IvRPs~V~g~~~~p~~gw~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~d~vpVDdva 309 (519)
|...|.+++.. ..++.++++|||.+.++.... .. ............. .........+|+|
T Consensus 143 K~a~~~~~~~~a~e~~~~gi~v~~i~pg~~~t~~~~~----~~--~~~~~~~~~~~~~---------~~~~~~~~~~~~a 207 (234)
T PRK07577 143 KSALVGCTRTWALELAEYGITVNAVAPGPIETELFRQ----TR--PVGSEEEKRVLAS---------IPMRRLGTPEEVA 207 (234)
T ss_pred HHHHHHHHHHHHHHHHhhCcEEEEEecCcccCccccc----cc--ccchhHHHHHhhc---------CCCCCCcCHHHHH
Confidence 99999888754 358999999999987653210 00 0000011111111 0111234678999
Q ss_pred HHHHHHHHHhccCCCCCcEEEecCC
Q 010075 310 NAMIVAMVAHAKQPSDANIYHVGSS 334 (519)
Q Consensus 310 ~aii~a~~~~~~~~~~~~iyni~s~ 334 (519)
.+++.++..... ...+.++++.++
T Consensus 208 ~~~~~l~~~~~~-~~~g~~~~~~g~ 231 (234)
T PRK07577 208 AAIAFLLSDDAG-FITGQVLGVDGG 231 (234)
T ss_pred HHHHHHhCcccC-CccceEEEecCC
Confidence 999998854322 223678887665
|
|
| >PRK12742 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=99.62 E-value=3.5e-14 Score=137.80 Aligned_cols=215 Identities=14% Similarity=0.125 Sum_probs=136.9
Q ss_pred cCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 010075 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (519)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (519)
+++|+|+||||+|+||++++++|++.| .+|+++.|+... ..+.+. ++ .++.+
T Consensus 4 ~~~k~vlItGasggIG~~~a~~l~~~G---~~v~~~~~~~~~--~~~~l~-------------~~----------~~~~~ 55 (237)
T PRK12742 4 FTGKKVLVLGGSRGIGAAIVRRFVTDG---ANVRFTYAGSKD--AAERLA-------------QE----------TGATA 55 (237)
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHCC---CEEEEecCCCHH--HHHHHH-------------HH----------hCCeE
Confidence 568999999999999999999999988 466776664321 112221 11 12457
Q ss_pred EeccCCCCCCCCChhhhHHHHh---cCccEEEEcCccCCc-------cccHHHHHHHhHHHHHHHHHHHHh-ccCCceEE
Q 010075 90 VPGDISSEDLGLKDSNLKEELW---NELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKK-CVKLKVFV 158 (519)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~---~~vdiViH~Aa~v~f-------~~~~~~~~~~Nv~gt~~ll~~a~~-~~~l~~~V 158 (519)
+.+|++++ .+. .... .++|++||+||.... .+.++..+++|+.|+..++..+.+ +..-.++|
T Consensus 56 ~~~D~~~~------~~~-~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv 128 (237)
T PRK12742 56 VQTDSADR------DAV-IDVVRKSGALDILVVNAGIAVFGDALELDADDIDRLFKINIHAPYHASVEAARQMPEGGRII 128 (237)
T ss_pred EecCCCCH------HHH-HHHHHHhCCCcEEEECCCCCCCCCcccCCHHHHHHHHhHHHHHHHHHHHHHHHHHhcCCeEE
Confidence 78999853 222 2322 459999999997532 145678899999999998755543 43446899
Q ss_pred EEecceeecCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcHHHHHHHHH
Q 010075 159 HVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMG 238 (519)
Q Consensus 159 ~vSTa~v~~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~Y~~sK~~a 238 (519)
++||...... +. .....|+.+|+..
T Consensus 129 ~isS~~~~~~--------~~-----------------------------------------------~~~~~Y~~sKaa~ 153 (237)
T PRK12742 129 IIGSVNGDRM--------PV-----------------------------------------------AGMAAYAASKSAL 153 (237)
T ss_pred EEeccccccC--------CC-----------------------------------------------CCCcchHHhHHHH
Confidence 9999653110 00 2235799999999
Q ss_pred HHHHHHh-----hcCCcEEEEecCccccCCCCCCCcccccccccHHHHHHhhcCCceeeccCCCceeeeeeHHHHHHHHH
Q 010075 239 EMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMI 313 (519)
Q Consensus 239 E~lv~~~-----~~~lp~~IvRPs~V~g~~~~p~~gw~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~d~vpVDdva~aii 313 (519)
|.+++.. ..++.+.+++||.|..+.... . .+ ...... ... + ..-+...+|+++++.
T Consensus 154 ~~~~~~la~~~~~~gi~v~~v~Pg~~~t~~~~~---~-----~~--~~~~~~-~~~---~-----~~~~~~p~~~a~~~~ 214 (237)
T PRK12742 154 QGMARGLARDFGPRGITINVVQPGPIDTDANPA---N-----GP--MKDMMH-SFM---A-----IKRHGRPEEVAGMVA 214 (237)
T ss_pred HHHHHHHHHHHhhhCeEEEEEecCcccCCcccc---c-----cH--HHHHHH-hcC---C-----CCCCCCHHHHHHHHH
Confidence 9988764 357999999999987654311 0 00 111111 100 0 112357789999998
Q ss_pred HHHHHhccCCCCCcEEEecCC
Q 010075 314 VAMVAHAKQPSDANIYHVGSS 334 (519)
Q Consensus 314 ~a~~~~~~~~~~~~iyni~s~ 334 (519)
.++.... ..-.+.++.+.+|
T Consensus 215 ~l~s~~~-~~~~G~~~~~dgg 234 (237)
T PRK12742 215 WLAGPEA-SFVTGAMHTIDGA 234 (237)
T ss_pred HHcCccc-CcccCCEEEeCCC
Confidence 8875332 2223566666554
|
|
| >PRK05693 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.62 E-value=4.9e-14 Score=140.26 Aligned_cols=158 Identities=13% Similarity=0.197 Sum_probs=113.8
Q ss_pred CEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEEec
Q 010075 13 KTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVPG 92 (519)
Q Consensus 13 k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v~g 92 (519)
|+++||||||+||+++++.|++.| .+|+++.|+... .+.+. ..++.++.+
T Consensus 2 k~vlItGasggiG~~la~~l~~~G---~~V~~~~r~~~~---~~~~~------------------------~~~~~~~~~ 51 (274)
T PRK05693 2 PVVLITGCSSGIGRALADAFKAAG---YEVWATARKAED---VEALA------------------------AAGFTAVQL 51 (274)
T ss_pred CEEEEecCCChHHHHHHHHHHHCC---CEEEEEeCCHHH---HHHHH------------------------HCCCeEEEe
Confidence 689999999999999999999988 678888886421 11111 134678899
Q ss_pred cCCCCCCCCChhhhHHHHh-------cCccEEEEcCccCCc-------cccHHHHHHHhHHHHHHHHHHHHhc--cCCce
Q 010075 93 DISSEDLGLKDSNLKEELW-------NELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKC--VKLKV 156 (519)
Q Consensus 93 Dl~~~~lgls~~~~~~~l~-------~~vdiViH~Aa~v~f-------~~~~~~~~~~Nv~gt~~ll~~a~~~--~~l~~ 156 (519)
|++++ ++ .+.++ .++|+|||+||.... .+.++..+++|+.|+.++++.+... ++..+
T Consensus 52 Dl~~~------~~-~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~g~ 124 (274)
T PRK05693 52 DVNDG------AA-LARLAEELEAEHGGLDVLINNAGYGAMGPLLDGGVEAMRRQFETNVFAVVGVTRALFPLLRRSRGL 124 (274)
T ss_pred eCCCH------HH-HHHHHHHHHHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcCCE
Confidence 99963 22 22222 468999999997532 2456778999999999998877432 23467
Q ss_pred EEEEecceeecCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcHHHHHHH
Q 010075 157 FVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKT 236 (519)
Q Consensus 157 ~V~vSTa~v~~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~Y~~sK~ 236 (519)
+|++||....... .....|+.||+
T Consensus 125 iv~isS~~~~~~~--------------------------------------------------------~~~~~Y~~sK~ 148 (274)
T PRK05693 125 VVNIGSVSGVLVT--------------------------------------------------------PFAGAYCASKA 148 (274)
T ss_pred EEEECCccccCCC--------------------------------------------------------CCccHHHHHHH
Confidence 8999886542210 12357999999
Q ss_pred HHHHHHHHh-----hcCCcEEEEecCccccCC
Q 010075 237 MGEMLMQQS-----KENLSLVIIRPTVVSGTY 263 (519)
Q Consensus 237 ~aE~lv~~~-----~~~lp~~IvRPs~V~g~~ 263 (519)
..+.+.+.. ..++.+++++||.|.++.
T Consensus 149 al~~~~~~l~~e~~~~gi~v~~v~pg~v~t~~ 180 (274)
T PRK05693 149 AVHALSDALRLELAPFGVQVMEVQPGAIASQF 180 (274)
T ss_pred HHHHHHHHHHHHhhhhCeEEEEEecCcccccc
Confidence 988887654 358999999999997654
|
|
| >PRK08085 gluconate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.61 E-value=3.6e-14 Score=139.47 Aligned_cols=221 Identities=12% Similarity=0.144 Sum_probs=143.4
Q ss_pred cCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 010075 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (519)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (519)
+.+|++|||||+|+||++++++|++.| .+|++..|+... .+++.++ ++.. ..++.+
T Consensus 7 l~~k~~lItGas~giG~~ia~~L~~~G---~~vvl~~r~~~~---~~~~~~~---------l~~~---------~~~~~~ 62 (254)
T PRK08085 7 LAGKNILITGSAQGIGFLLATGLAEYG---AEIIINDITAER---AELAVAK---------LRQE---------GIKAHA 62 (254)
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHcC---CEEEEEcCCHHH---HHHHHHH---------HHhc---------CCeEEE
Confidence 468999999999999999999999988 577888876422 1111111 1110 245778
Q ss_pred EeccCCCCCCCCChhhhHHHHh-------cCccEEEEcCccCCc-------cccHHHHHHHhHHHHHHHHHHHHhc---c
Q 010075 90 VPGDISSEDLGLKDSNLKEELW-------NELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKC---V 152 (519)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~-------~~vdiViH~Aa~v~f-------~~~~~~~~~~Nv~gt~~ll~~a~~~---~ 152 (519)
+.+|+++++ ..+.+. ..+|+|||+|+.... .+.++..+++|+.|+..+++.+.+. .
T Consensus 63 ~~~Dl~~~~-------~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~ 135 (254)
T PRK08085 63 APFNVTHKQ-------EVEAAIEHIEKDIGPIDVLINNAGIQRRHPFTEFPEQEWNDVIAVNQTAVFLVSQAVARYMVKR 135 (254)
T ss_pred EecCCCCHH-------HHHHHHHHHHHhcCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc
Confidence 899999642 222222 358999999997532 2567788999999999888876542 2
Q ss_pred CCceEEEEecceeecCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcHHH
Q 010075 153 KLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYV 232 (519)
Q Consensus 153 ~l~~~V~vSTa~v~~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~Y~ 232 (519)
+..++|++||....... .....|+
T Consensus 136 ~~~~iv~isS~~~~~~~--------------------------------------------------------~~~~~Y~ 159 (254)
T PRK08085 136 QAGKIINICSMQSELGR--------------------------------------------------------DTITPYA 159 (254)
T ss_pred CCcEEEEEccchhccCC--------------------------------------------------------CCCcchH
Confidence 45689999986432110 1235799
Q ss_pred HHHHHHHHHHHHh-----hcCCcEEEEecCccccCCCCCCCcccccccccHHHHHHhhcCCceeeccCCCceeeeeeHHH
Q 010075 233 FTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDM 307 (519)
Q Consensus 233 ~sK~~aE~lv~~~-----~~~lp~~IvRPs~V~g~~~~p~~gw~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~d~vpVDd 307 (519)
.+|+..|.+++.. ..++.+..++||.+.++...+..+ ...+...+... .....+...+|
T Consensus 160 ~sK~a~~~~~~~la~e~~~~gi~v~~v~pG~~~t~~~~~~~~-------~~~~~~~~~~~---------~p~~~~~~~~~ 223 (254)
T PRK08085 160 ASKGAVKMLTRGMCVELARHNIQVNGIAPGYFKTEMTKALVE-------DEAFTAWLCKR---------TPAARWGDPQE 223 (254)
T ss_pred HHHHHHHHHHHHHHHHHHhhCeEEEEEEeCCCCCcchhhhcc-------CHHHHHHHHhc---------CCCCCCcCHHH
Confidence 9999999998875 347999999999998875432211 01111111111 11223567899
Q ss_pred HHHHHHHHHHHhccCCCCCcEEEecCC
Q 010075 308 VVNAMIVAMVAHAKQPSDANIYHVGSS 334 (519)
Q Consensus 308 va~aii~a~~~~~~~~~~~~iyni~s~ 334 (519)
+++++..++..... .-.+.+..+.+|
T Consensus 224 va~~~~~l~~~~~~-~i~G~~i~~dgg 249 (254)
T PRK08085 224 LIGAAVFLSSKASD-FVNGHLLFVDGG 249 (254)
T ss_pred HHHHHHHHhCcccc-CCcCCEEEECCC
Confidence 99998888763221 112456656554
|
|
| >PRK07326 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.61 E-value=7.9e-14 Score=135.36 Aligned_cols=195 Identities=14% Similarity=0.141 Sum_probs=132.9
Q ss_pred cCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 010075 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (519)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (519)
+.+++|+||||||++|+++++.|++.| .+|+++.|+... .+++.+++ ++ ..++.+
T Consensus 4 ~~~~~ilItGatg~iG~~la~~l~~~g---~~V~~~~r~~~~---~~~~~~~l---------~~----------~~~~~~ 58 (237)
T PRK07326 4 LKGKVALITGGSKGIGFAIAEALLAEG---YKVAITARDQKE---LEEAAAEL---------NN----------KGNVLG 58 (237)
T ss_pred CCCCEEEEECCCCcHHHHHHHHHHHCC---CEEEEeeCCHHH---HHHHHHHH---------hc----------cCcEEE
Confidence 457999999999999999999999987 578999886421 12222111 10 146888
Q ss_pred EeccCCCCCCCCChhhhHHHHh-------cCccEEEEcCccCCc-------cccHHHHHHHhHHHHHHHHHHHHhc--cC
Q 010075 90 VPGDISSEDLGLKDSNLKEELW-------NELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKC--VK 153 (519)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~-------~~vdiViH~Aa~v~f-------~~~~~~~~~~Nv~gt~~ll~~a~~~--~~ 153 (519)
+.+|+++++ + ...++ ..+|+|||+|+.... .+.++..+++|+.|+..+++.+.+. ++
T Consensus 59 ~~~D~~~~~------~-~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~ 131 (237)
T PRK07326 59 LAADVRDEA------D-VQRAVDAIVAAFGGLDVLIANAGVGHFAPVEELTPEEWRLVIDTNLTGAFYTIKAAVPALKRG 131 (237)
T ss_pred EEccCCCHH------H-HHHHHHHHHHHcCCCCEEEECCCCCCCCchhhCCHHHHHHHHhhccHHHHHHHHHHHHHHHHC
Confidence 999999632 2 22222 379999999987543 2346677999999999998887542 24
Q ss_pred CceEEEEecceeecCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcHHHH
Q 010075 154 LKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVF 233 (519)
Q Consensus 154 l~~~V~vSTa~v~~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~Y~~ 233 (519)
.+++|++||....... .....|+.
T Consensus 132 ~~~iv~~ss~~~~~~~--------------------------------------------------------~~~~~y~~ 155 (237)
T PRK07326 132 GGYIINISSLAGTNFF--------------------------------------------------------AGGAAYNA 155 (237)
T ss_pred CeEEEEECChhhccCC--------------------------------------------------------CCCchHHH
Confidence 5689999987543211 12346999
Q ss_pred HHHHHHHHHHHh-----hcCCcEEEEecCccccCCCCCCCcccccccccHHHHHHhhcCCceeeccCCCceeeeeeHHHH
Q 010075 234 TKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMV 308 (519)
Q Consensus 234 sK~~aE~lv~~~-----~~~lp~~IvRPs~V~g~~~~p~~gw~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~d~vpVDdv 308 (519)
+|+..+.+.+.. ..+++++++||+.+.++.....+. . .....+..+|+
T Consensus 156 sk~a~~~~~~~~~~~~~~~gi~v~~v~pg~~~t~~~~~~~~-------------------------~--~~~~~~~~~d~ 208 (237)
T PRK07326 156 SKFGLVGFSEAAMLDLRQYGIKVSTIMPGSVATHFNGHTPS-------------------------E--KDAWKIQPEDI 208 (237)
T ss_pred HHHHHHHHHHHHHHHhcccCcEEEEEeeccccCcccccccc-------------------------h--hhhccCCHHHH
Confidence 999888777754 358999999999886653211000 0 00012678999
Q ss_pred HHHHHHHHHHh
Q 010075 309 VNAMIVAMVAH 319 (519)
Q Consensus 309 a~aii~a~~~~ 319 (519)
+..++.++...
T Consensus 209 a~~~~~~l~~~ 219 (237)
T PRK07326 209 AQLVLDLLKMP 219 (237)
T ss_pred HHHHHHHHhCC
Confidence 99999998644
|
|
| >PRK05867 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.61 E-value=3.9e-14 Score=139.24 Aligned_cols=228 Identities=13% Similarity=0.077 Sum_probs=143.1
Q ss_pred cCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 010075 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (519)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (519)
++||+++||||||+||.+++++|++.| .+|++..|+... .+.+.+ .++.. ..++..
T Consensus 7 ~~~k~vlVtGas~gIG~~ia~~l~~~G---~~V~~~~r~~~~---~~~~~~---------~l~~~---------~~~~~~ 62 (253)
T PRK05867 7 LHGKRALITGASTGIGKRVALAYVEAG---AQVAIAARHLDA---LEKLAD---------EIGTS---------GGKVVP 62 (253)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCC---CEEEEEcCCHHH---HHHHHH---------HHHhc---------CCeEEE
Confidence 578999999999999999999999998 577888886422 222221 11111 246788
Q ss_pred EeccCCCCCCCCChhhhHHHHhcCccEEEEcCccCCc-------cccHHHHHHHhHHHHHHHHHHHHhc--c-C-CceEE
Q 010075 90 VPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKC--V-K-LKVFV 158 (519)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~~~vdiViH~Aa~v~f-------~~~~~~~~~~Nv~gt~~ll~~a~~~--~-~-l~~~V 158 (519)
+.+|+++++......+...+...++|++||+||.... .+.++..+++|+.|+..+++.+... + + -.++|
T Consensus 63 ~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv 142 (253)
T PRK05867 63 VCCDVSQHQQVTSMLDQVTAELGGIDIAVCNAGIITVTPMLDMPLEEFQRLQNTNVTGVFLTAQAAAKAMVKQGQGGVII 142 (253)
T ss_pred EEccCCCHHHHHHHHHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHhcchhHHHHHHHHHHHHHhcCCCcEEE
Confidence 9999996421000000001112479999999997542 2456777899999999998887532 1 1 24688
Q ss_pred EEecceeecCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcHHHHHHHHH
Q 010075 159 HVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMG 238 (519)
Q Consensus 159 ~vSTa~v~~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~Y~~sK~~a 238 (519)
++||........ + .....|+.||+..
T Consensus 143 ~~sS~~~~~~~~------------~------------------------------------------~~~~~Y~asKaal 168 (253)
T PRK05867 143 NTASMSGHIINV------------P------------------------------------------QQVSHYCASKAAV 168 (253)
T ss_pred EECcHHhcCCCC------------C------------------------------------------CCccchHHHHHHH
Confidence 888864321000 0 1124699999999
Q ss_pred HHHHHHh-----hcCCcEEEEecCccccCCCCCCCcccccccccHHHHHHhhcCCceeeccCCCceeeeeeHHHHHHHHH
Q 010075 239 EMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMI 313 (519)
Q Consensus 239 E~lv~~~-----~~~lp~~IvRPs~V~g~~~~p~~gw~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~d~vpVDdva~aii 313 (519)
+.+++.. ..++++..+.||.|-.+..++.+. ........ .+ ...+...+|+|++++
T Consensus 169 ~~~~~~la~e~~~~gI~vn~i~PG~v~t~~~~~~~~----------~~~~~~~~----~~-----~~r~~~p~~va~~~~ 229 (253)
T PRK05867 169 IHLTKAMAVELAPHKIRVNSVSPGYILTELVEPYTE----------YQPLWEPK----IP-----LGRLGRPEELAGLYL 229 (253)
T ss_pred HHHHHHHHHHHhHhCeEEEEeecCCCCCcccccchH----------HHHHHHhc----CC-----CCCCcCHHHHHHHHH
Confidence 9988865 347999999999996654322111 11111111 01 123467899999999
Q ss_pred HHHHHhccCCCCCcEEEecCCC
Q 010075 314 VAMVAHAKQPSDANIYHVGSSL 335 (519)
Q Consensus 314 ~a~~~~~~~~~~~~iyni~s~~ 335 (519)
.++.... ..-.+++..+.+|.
T Consensus 230 ~L~s~~~-~~~tG~~i~vdgG~ 250 (253)
T PRK05867 230 YLASEAS-SYMTGSDIVIDGGY 250 (253)
T ss_pred HHcCccc-CCcCCCeEEECCCc
Confidence 8885322 22235677776663
|
|
| >PRK09291 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.61 E-value=3.1e-14 Score=139.95 Aligned_cols=162 Identities=15% Similarity=0.127 Sum_probs=113.7
Q ss_pred CCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEEe
Q 010075 12 NKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVP 91 (519)
Q Consensus 12 ~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v~ 91 (519)
+++||||||||+||+++++.|++.| .+|+++.|+.... +.+.+ ..+ . ...++.++.
T Consensus 2 ~~~vlVtGasg~iG~~ia~~l~~~G---~~v~~~~r~~~~~---~~~~~---------~~~-~--------~~~~~~~~~ 57 (257)
T PRK09291 2 SKTILITGAGSGFGREVALRLARKG---HNVIAGVQIAPQV---TALRA---------EAA-R--------RGLALRVEK 57 (257)
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCC---CEEEEEeCCHHHH---HHHHH---------HHH-h--------cCCcceEEE
Confidence 5789999999999999999999988 6788888864221 11111 000 0 024588999
Q ss_pred ccCCCCCCCCChhhhHHHHhc-CccEEEEcCccCCc-------cccHHHHHHHhHHHHHHHHHHH----HhccCCceEEE
Q 010075 92 GDISSEDLGLKDSNLKEELWN-ELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFA----KKCVKLKVFVH 159 (519)
Q Consensus 92 gDl~~~~lgls~~~~~~~l~~-~vdiViH~Aa~v~f-------~~~~~~~~~~Nv~gt~~ll~~a----~~~~~l~~~V~ 159 (519)
+|++++ .+ ...... ++|+|||+|+.... .+.++..+++|+.|+..+.+.+ ++. +.+++|+
T Consensus 58 ~D~~~~------~~-~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~~~iv~ 129 (257)
T PRK09291 58 LDLTDA------ID-RAQAAEWDVDVLLNNAGIGEAGAVVDIPVELVRELFETNVFGPLELTQGFVRKMVAR-GKGKVVF 129 (257)
T ss_pred eeCCCH------HH-HHHHhcCCCCEEEECCCcCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-CCceEEE
Confidence 999963 33 334444 89999999997532 2346677899999988776544 332 4579999
Q ss_pred EecceeecCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcHHHHHHHHHH
Q 010075 160 VSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGE 239 (519)
Q Consensus 160 vSTa~v~~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~Y~~sK~~aE 239 (519)
+||....... .....|+.||...|
T Consensus 130 ~SS~~~~~~~--------------------------------------------------------~~~~~Y~~sK~a~~ 153 (257)
T PRK09291 130 TSSMAGLITG--------------------------------------------------------PFTGAYCASKHALE 153 (257)
T ss_pred EcChhhccCC--------------------------------------------------------CCcchhHHHHHHHH
Confidence 9987432110 12357999999999
Q ss_pred HHHHHh-----hcCCcEEEEecCcccc
Q 010075 240 MLMQQS-----KENLSLVIIRPTVVSG 261 (519)
Q Consensus 240 ~lv~~~-----~~~lp~~IvRPs~V~g 261 (519)
.+++.. ..+++++++|||.+..
T Consensus 154 ~~~~~l~~~~~~~gi~~~~v~pg~~~t 180 (257)
T PRK09291 154 AIAEAMHAELKPFGIQVATVNPGPYLT 180 (257)
T ss_pred HHHHHHHHHHHhcCcEEEEEecCcccc
Confidence 887654 3589999999998754
|
|
| >PRK05866 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.61 E-value=7e-14 Score=140.80 Aligned_cols=196 Identities=16% Similarity=0.172 Sum_probs=132.8
Q ss_pred cCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 010075 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (519)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (519)
+++++|+||||||+||+++++.|++.| .+|+++.|+... .+.+.++ +.+. ..++.+
T Consensus 38 ~~~k~vlItGasggIG~~la~~La~~G---~~Vi~~~R~~~~---l~~~~~~---------l~~~---------~~~~~~ 93 (293)
T PRK05866 38 LTGKRILLTGASSGIGEAAAEQFARRG---ATVVAVARREDL---LDAVADR---------ITRA---------GGDAMA 93 (293)
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCC---CEEEEEECCHHH---HHHHHHH---------HHhc---------CCcEEE
Confidence 578999999999999999999999988 678999987421 1222211 1110 245788
Q ss_pred EeccCCCCCCCCChhhhHHHHh-------cCccEEEEcCccCCcc---------ccHHHHHHHhHHHHHHHHHHHHh-c-
Q 010075 90 VPGDISSEDLGLKDSNLKEELW-------NELDIMVNSAAITKFD---------ERYDVAFGINTLGVIHLVNFAKK-C- 151 (519)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~-------~~vdiViH~Aa~v~f~---------~~~~~~~~~Nv~gt~~ll~~a~~-~- 151 (519)
+.+|++++ +....++ .++|+|||+||..... +.++..+++|+.|+..+++.+.. +
T Consensus 94 ~~~Dl~d~-------~~v~~~~~~~~~~~g~id~li~~AG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~ 166 (293)
T PRK05866 94 VPCDLSDL-------DAVDALVADVEKRIGGVDILINNAGRSIRRPLAESLDRWHDVERTMVLNYYAPLRLIRGLAPGML 166 (293)
T ss_pred EEccCCCH-------HHHHHHHHHHHHHcCCCCEEEECCCCCCCcchhhccccHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999963 2222333 3799999999975321 34466789999998888776532 1
Q ss_pred -cCCceEEEEecceeecCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcH
Q 010075 152 -VKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNT 230 (519)
Q Consensus 152 -~~l~~~V~vSTa~v~~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~ 230 (519)
.+..++|++||..+..... +....
T Consensus 167 ~~~~g~iv~isS~~~~~~~~-------------------------------------------------------p~~~~ 191 (293)
T PRK05866 167 ERGDGHIINVATWGVLSEAS-------------------------------------------------------PLFSV 191 (293)
T ss_pred hcCCcEEEEECChhhcCCCC-------------------------------------------------------CCcch
Confidence 2557899999975432100 12357
Q ss_pred HHHHHHHHHHHHHHh-----hcCCcEEEEecCccccCCCCCCCcccccccccHHHHHHhhcCCceeeccCCCceeeeeeH
Q 010075 231 YVFTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPV 305 (519)
Q Consensus 231 Y~~sK~~aE~lv~~~-----~~~lp~~IvRPs~V~g~~~~p~~gw~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~d~vpV 305 (519)
|+.||+..+.+++.. ..++.+.+++||.|-++...+.. ...+ ...+..
T Consensus 192 Y~asKaal~~l~~~la~e~~~~gI~v~~v~pg~v~T~~~~~~~----------------------~~~~-----~~~~~p 244 (293)
T PRK05866 192 YNASKAALSAVSRVIETEWGDRGVHSTTLYYPLVATPMIAPTK----------------------AYDG-----LPALTA 244 (293)
T ss_pred HHHHHHHHHHHHHHHHHHhcccCcEEEEEEcCcccCccccccc----------------------cccC-----CCCCCH
Confidence 999999998887754 34799999999987665321100 0000 113678
Q ss_pred HHHHHHHHHHHHH
Q 010075 306 DMVVNAMIVAMVA 318 (519)
Q Consensus 306 Ddva~aii~a~~~ 318 (519)
|++|+.++.++.+
T Consensus 245 e~vA~~~~~~~~~ 257 (293)
T PRK05866 245 DEAAEWMVTAART 257 (293)
T ss_pred HHHHHHHHHHHhc
Confidence 9999999999863
|
|
| >PRK07109 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.61 E-value=9.8e-14 Score=142.31 Aligned_cols=201 Identities=16% Similarity=0.235 Sum_probs=132.8
Q ss_pred cCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 010075 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (519)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (519)
+++++|+||||||+||+++++.|++.| .+|+++.|+... .+.+.++ +++ . ..++.+
T Consensus 6 l~~k~vlITGas~gIG~~la~~la~~G---~~Vvl~~R~~~~---l~~~~~~---------l~~-~--------g~~~~~ 61 (334)
T PRK07109 6 IGRQVVVITGASAGVGRATARAFARRG---AKVVLLARGEEG---LEALAAE---------IRA-A--------GGEALA 61 (334)
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCC---CEEEEEECCHHH---HHHHHHH---------HHH-c--------CCcEEE
Confidence 568999999999999999999999988 578888886422 1222211 111 1 246788
Q ss_pred EeccCCCCCCCCChhhhHHHH-------hcCccEEEEcCccCCc-------cccHHHHHHHhHHHHHHHHHHHHh-c--c
Q 010075 90 VPGDISSEDLGLKDSNLKEEL-------WNELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKK-C--V 152 (519)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l-------~~~vdiViH~Aa~v~f-------~~~~~~~~~~Nv~gt~~ll~~a~~-~--~ 152 (519)
+.+|+++++ ..+.+ ...+|++||+|+...+ .+.++..+++|+.|+.++.+.+.+ + .
T Consensus 62 v~~Dv~d~~-------~v~~~~~~~~~~~g~iD~lInnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~l~~~~~~ 134 (334)
T PRK07109 62 VVADVADAE-------AVQAAADRAEEELGPIDTWVNNAMVTVFGPFEDVTPEEFRRVTEVTYLGVVHGTLAALRHMRPR 134 (334)
T ss_pred EEecCCCHH-------HHHHHHHHHHHHCCCCCEEEECCCcCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc
Confidence 999999632 22232 2469999999997533 145677788998887765554432 1 2
Q ss_pred CCceEEEEecceeecCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcHHH
Q 010075 153 KLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYV 232 (519)
Q Consensus 153 ~l~~~V~vSTa~v~~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~Y~ 232 (519)
+..++|++||...+... +....|+
T Consensus 135 ~~g~iV~isS~~~~~~~--------------------------------------------------------~~~~~Y~ 158 (334)
T PRK07109 135 DRGAIIQVGSALAYRSI--------------------------------------------------------PLQSAYC 158 (334)
T ss_pred CCcEEEEeCChhhccCC--------------------------------------------------------CcchHHH
Confidence 45789999998765421 1235699
Q ss_pred HHHHHHHHHHHHh-------hcCCcEEEEecCccccCCCCCCCcccccccccHHHHHHhhcCCceeeccCCCceeeeeeH
Q 010075 233 FTKTMGEMLMQQS-------KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPV 305 (519)
Q Consensus 233 ~sK~~aE~lv~~~-------~~~lp~~IvRPs~V~g~~~~p~~gw~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~d~vpV 305 (519)
.||+..+.+.+.. ..++.+++++|+.|-++.. .|..+ .. + ........++..
T Consensus 159 asK~a~~~~~~~l~~el~~~~~~I~v~~v~Pg~v~T~~~----~~~~~----------~~-~------~~~~~~~~~~~p 217 (334)
T PRK07109 159 AAKHAIRGFTDSLRCELLHDGSPVSVTMVQPPAVNTPQF----DWARS----------RL-P------VEPQPVPPIYQP 217 (334)
T ss_pred HHHHHHHHHHHHHHHHHhhcCCCeEEEEEeCCCccCchh----hhhhh----------hc-c------ccccCCCCCCCH
Confidence 9999888776643 1368999999998865422 11110 00 0 001112245688
Q ss_pred HHHHHHHHHHHHH
Q 010075 306 DMVVNAMIVAMVA 318 (519)
Q Consensus 306 Ddva~aii~a~~~ 318 (519)
+++|++++.++..
T Consensus 218 e~vA~~i~~~~~~ 230 (334)
T PRK07109 218 EVVADAILYAAEH 230 (334)
T ss_pred HHHHHHHHHHHhC
Confidence 9999999999864
|
|
| >PRK06114 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.61 E-value=3.5e-14 Score=139.71 Aligned_cols=230 Identities=14% Similarity=0.117 Sum_probs=142.7
Q ss_pred cCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 010075 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (519)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (519)
+++|+++||||+|+||++++++|++.| .+|+++.|+.... .+.+.++ ++.. ..++..
T Consensus 6 ~~~k~~lVtG~s~gIG~~ia~~l~~~G---~~v~~~~r~~~~~--~~~~~~~---------l~~~---------~~~~~~ 62 (254)
T PRK06114 6 LDGQVAFVTGAGSGIGQRIAIGLAQAG---ADVALFDLRTDDG--LAETAEH---------IEAA---------GRRAIQ 62 (254)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCC---CEEEEEeCCcchH--HHHHHHH---------HHhc---------CCceEE
Confidence 578999999999999999999999988 5788888864321 1111111 1110 246788
Q ss_pred EeccCCCCCCCCChhhhHHHHhcCccEEEEcCccCCc-------cccHHHHHHHhHHHHHHHHHHHHh-c--cCCceEEE
Q 010075 90 VPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKK-C--VKLKVFVH 159 (519)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~~~vdiViH~Aa~v~f-------~~~~~~~~~~Nv~gt~~ll~~a~~-~--~~l~~~V~ 159 (519)
+.+|+++++.-....+.......++|+|||+||.... .+.++..+++|+.|+..+++.+.. + .+..++|+
T Consensus 63 ~~~D~~~~~~i~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~ 142 (254)
T PRK06114 63 IAADVTSKADLRAAVARTEAELGALTLAVNAAGIANANPAEEMEEEQWQTVMDINLTGVFLSCQAEARAMLENGGGSIVN 142 (254)
T ss_pred EEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChHhCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcCCcEEEE
Confidence 9999996431000000011112458999999997542 245778899999999888776543 1 24468999
Q ss_pred EecceeecCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcHHHHHHHHHH
Q 010075 160 VSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGE 239 (519)
Q Consensus 160 vSTa~v~~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~Y~~sK~~aE 239 (519)
+||........+ .....|+.+|+..+
T Consensus 143 isS~~~~~~~~~------------------------------------------------------~~~~~Y~~sKaa~~ 168 (254)
T PRK06114 143 IASMSGIIVNRG------------------------------------------------------LLQAHYNASKAGVI 168 (254)
T ss_pred ECchhhcCCCCC------------------------------------------------------CCcchHHHHHHHHH
Confidence 998754321100 11346999999888
Q ss_pred HHHHHh-----hcCCcEEEEecCccccCCCCCCCcccccccccHHHHHHhhcCCceeeccCCCceeeeeeHHHHHHHHHH
Q 010075 240 MLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMIV 314 (519)
Q Consensus 240 ~lv~~~-----~~~lp~~IvRPs~V~g~~~~p~~gw~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~d~vpVDdva~aii~ 314 (519)
.+++.. ..++++.+++||.|.++.... +... ......... .+ ..-+..++|++++++.
T Consensus 169 ~l~~~la~e~~~~gi~v~~v~PG~i~t~~~~~-~~~~-------~~~~~~~~~----~p-----~~r~~~~~dva~~~~~ 231 (254)
T PRK06114 169 HLSKSLAMEWVGRGIRVNSISPGYTATPMNTR-PEMV-------HQTKLFEEQ----TP-----MQRMAKVDEMVGPAVF 231 (254)
T ss_pred HHHHHHHHHHhhcCeEEEEEeecCccCccccc-ccch-------HHHHHHHhc----CC-----CCCCcCHHHHHHHHHH
Confidence 887755 457999999999987764321 1110 111111111 01 1124567999999998
Q ss_pred HHHHhccCCCCCcEEEecCC
Q 010075 315 AMVAHAKQPSDANIYHVGSS 334 (519)
Q Consensus 315 a~~~~~~~~~~~~iyni~s~ 334 (519)
++.... ..-.+++..+.+|
T Consensus 232 l~s~~~-~~~tG~~i~~dgg 250 (254)
T PRK06114 232 LLSDAA-SFCTGVDLLVDGG 250 (254)
T ss_pred HcCccc-cCcCCceEEECcC
Confidence 875322 2223567777665
|
|
| >PRK06113 7-alpha-hydroxysteroid dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.61 E-value=3e-14 Score=140.15 Aligned_cols=222 Identities=16% Similarity=0.159 Sum_probs=145.3
Q ss_pred cCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 010075 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (519)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (519)
+++|+|+||||+|+||++++++|++.| .+|+++.|+... .+++.+++ +. ...++..
T Consensus 9 l~~k~vlVtG~s~gIG~~la~~l~~~G---~~vv~~~r~~~~---~~~~~~~l---------~~---------~~~~~~~ 64 (255)
T PRK06113 9 LDGKCAIITGAGAGIGKEIAITFATAG---ASVVVSDINADA---ANHVVDEI---------QQ---------LGGQAFA 64 (255)
T ss_pred cCCCEEEEECCCchHHHHHHHHHHHCC---CeEEEEeCCHHH---HHHHHHHH---------Hh---------cCCcEEE
Confidence 568999999999999999999999988 567888776432 22222111 11 0246788
Q ss_pred EeccCCCCCCCCChhhhHHHH-------hcCccEEEEcCccCCc---c---ccHHHHHHHhHHHHHHHHHHHHhc---cC
Q 010075 90 VPGDISSEDLGLKDSNLKEEL-------WNELDIMVNSAAITKF---D---ERYDVAFGINTLGVIHLVNFAKKC---VK 153 (519)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l-------~~~vdiViH~Aa~v~f---~---~~~~~~~~~Nv~gt~~ll~~a~~~---~~ 153 (519)
+.+|+++++ + ...+ ..++|+|||+||.... + +.++..+++|+.|+.++++.+... .+
T Consensus 65 ~~~D~~~~~------~-i~~~~~~~~~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~ 137 (255)
T PRK06113 65 CRCDITSEQ------E-LSALADFALSKLGKVDILVNNAGGGGPKPFDMPMADFRRAYELNVFSFFHLSQLVAPEMEKNG 137 (255)
T ss_pred EEccCCCHH------H-HHHHHHHHHHHcCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHhhhhHHHHHHHHHHHHHhcC
Confidence 899999632 2 2222 2468999999997532 2 456677999999999999988631 13
Q ss_pred CceEEEEecceeecCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcHHHH
Q 010075 154 LKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVF 233 (519)
Q Consensus 154 l~~~V~vSTa~v~~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~Y~~ 233 (519)
..++|++||....... .....|+.
T Consensus 138 ~~~iv~isS~~~~~~~--------------------------------------------------------~~~~~Y~~ 161 (255)
T PRK06113 138 GGVILTITSMAAENKN--------------------------------------------------------INMTSYAS 161 (255)
T ss_pred CcEEEEEecccccCCC--------------------------------------------------------CCcchhHH
Confidence 4589999997532110 22357999
Q ss_pred HHHHHHHHHHHh-----hcCCcEEEEecCccccCCCCCCCcccccccccHHHHHHhhcCCceeeccCCCceeeeeeHHHH
Q 010075 234 TKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMV 308 (519)
Q Consensus 234 sK~~aE~lv~~~-----~~~lp~~IvRPs~V~g~~~~p~~gw~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~d~vpVDdv 308 (519)
||+..+.+++.. ..++.+.++.||.+..+..... ............ .....+...+|+
T Consensus 162 sK~a~~~~~~~la~~~~~~~i~v~~v~pg~~~t~~~~~~--------~~~~~~~~~~~~---------~~~~~~~~~~d~ 224 (255)
T PRK06113 162 SKAAASHLVRNMAFDLGEKNIRVNGIAPGAILTDALKSV--------ITPEIEQKMLQH---------TPIRRLGQPQDI 224 (255)
T ss_pred HHHHHHHHHHHHHHHhhhhCeEEEEEecccccccccccc--------cCHHHHHHHHhc---------CCCCCCcCHHHH
Confidence 999999998765 3468999999998876532110 011111111111 011234678999
Q ss_pred HHHHHHHHHHhccCCCCCcEEEecCCCC
Q 010075 309 VNAMIVAMVAHAKQPSDANIYHVGSSLR 336 (519)
Q Consensus 309 a~aii~a~~~~~~~~~~~~iyni~s~~~ 336 (519)
+++++.++... ...-.++++++.+|..
T Consensus 225 a~~~~~l~~~~-~~~~~G~~i~~~gg~~ 251 (255)
T PRK06113 225 ANAALFLCSPA-ASWVSGQILTVSGGGV 251 (255)
T ss_pred HHHHHHHcCcc-ccCccCCEEEECCCcc
Confidence 99999988532 2222367888887743
|
|
| >PRK06101 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.61 E-value=4.3e-14 Score=137.93 Aligned_cols=187 Identities=12% Similarity=0.128 Sum_probs=130.7
Q ss_pred CEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEEec
Q 010075 13 KTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVPG 92 (519)
Q Consensus 13 k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v~g 92 (519)
++++||||||+||+++++.|++.| .+|+++.|+... .+.+. +. ..++.++.+
T Consensus 2 ~~vlItGas~giG~~la~~L~~~G---~~V~~~~r~~~~---~~~~~-------------~~---------~~~~~~~~~ 53 (240)
T PRK06101 2 TAVLITGATSGIGKQLALDYAKQG---WQVIACGRNQSV---LDELH-------------TQ---------SANIFTLAF 53 (240)
T ss_pred cEEEEEcCCcHHHHHHHHHHHhCC---CEEEEEECCHHH---HHHHH-------------Hh---------cCCCeEEEe
Confidence 689999999999999999999988 578899886321 11111 00 145788999
Q ss_pred cCCCCCCCCChhhhHHHHhc----CccEEEEcCccCCc-------cccHHHHHHHhHHHHHHHHHHHHhc-cCCceEEEE
Q 010075 93 DISSEDLGLKDSNLKEELWN----ELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKC-VKLKVFVHV 160 (519)
Q Consensus 93 Dl~~~~lgls~~~~~~~l~~----~vdiViH~Aa~v~f-------~~~~~~~~~~Nv~gt~~ll~~a~~~-~~l~~~V~v 160 (519)
|++++ +..+.+.+ .+|+++|+||...+ .+.++..+++|+.|+.++++.+... .+-+++|++
T Consensus 54 D~~~~-------~~~~~~~~~~~~~~d~~i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~iv~i 126 (240)
T PRK06101 54 DVTDH-------PGTKAALSQLPFIPELWIFNAGDCEYMDDGKVDATLMARVFNVNVLGVANCIEGIQPHLSCGHRVVIV 126 (240)
T ss_pred eCCCH-------HHHHHHHHhcccCCCEEEEcCcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCeEEEE
Confidence 99953 32334443 37899999986432 1346678999999999999988753 234578988
Q ss_pred ecceeecCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcHHHHHHHHHHH
Q 010075 161 STAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEM 240 (519)
Q Consensus 161 STa~v~~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~Y~~sK~~aE~ 240 (519)
||....... .....|+.||+..+.
T Consensus 127 sS~~~~~~~--------------------------------------------------------~~~~~Y~asK~a~~~ 150 (240)
T PRK06101 127 GSIASELAL--------------------------------------------------------PRAEAYGASKAAVAY 150 (240)
T ss_pred echhhccCC--------------------------------------------------------CCCchhhHHHHHHHH
Confidence 886422100 123479999999999
Q ss_pred HHHHh-----hcCCcEEEEecCccccCCCCCCCcccccccccHHHHHHhhcCCceeeccCCCceeeeeeHHHHHHHHHHH
Q 010075 241 LMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMIVA 315 (519)
Q Consensus 241 lv~~~-----~~~lp~~IvRPs~V~g~~~~p~~gw~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~d~vpVDdva~aii~a 315 (519)
+.+.+ ..+++++++|||.|.++..+.. . . . ....++.+++|+.++.+
T Consensus 151 ~~~~l~~e~~~~gi~v~~v~pg~i~t~~~~~~-----~------------------~--~---~~~~~~~~~~a~~i~~~ 202 (240)
T PRK06101 151 FARTLQLDLRPKGIEVVTVFPGFVATPLTDKN-----T------------------F--A---MPMIITVEQASQEIRAQ 202 (240)
T ss_pred HHHHHHHHHHhcCceEEEEeCCcCCCCCcCCC-----C------------------C--C---CCcccCHHHHHHHHHHH
Confidence 88754 4589999999999987643210 0 0 0 01147899999999998
Q ss_pred HHH
Q 010075 316 MVA 318 (519)
Q Consensus 316 ~~~ 318 (519)
+..
T Consensus 203 i~~ 205 (240)
T PRK06101 203 LAR 205 (240)
T ss_pred Hhc
Confidence 864
|
|
| >PRK08589 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.61 E-value=3e-14 Score=141.81 Aligned_cols=230 Identities=12% Similarity=0.139 Sum_probs=141.9
Q ss_pred cCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 010075 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (519)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (519)
++||+++||||||+||+++++.|++.| .+|+++.|+ .. .+.+.++ +++. ..++.+
T Consensus 4 l~~k~vlItGas~gIG~aia~~l~~~G---~~vi~~~r~-~~---~~~~~~~---------~~~~---------~~~~~~ 58 (272)
T PRK08589 4 LENKVAVITGASTGIGQASAIALAQEG---AYVLAVDIA-EA---VSETVDK---------IKSN---------GGKAKA 58 (272)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCC---CEEEEEeCc-HH---HHHHHHH---------HHhc---------CCeEEE
Confidence 578999999999999999999999998 678888886 21 1111111 1110 246889
Q ss_pred EeccCCCCCCCCChhhhHHH---HhcCccEEEEcCccCCc--------cccHHHHHHHhHHHHHHHHHHHHhc--cCCce
Q 010075 90 VPGDISSEDLGLKDSNLKEE---LWNELDIMVNSAAITKF--------DERYDVAFGINTLGVIHLVNFAKKC--VKLKV 156 (519)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~---l~~~vdiViH~Aa~v~f--------~~~~~~~~~~Nv~gt~~ll~~a~~~--~~l~~ 156 (519)
+.+|++++.-- ....+. ...++|++||+||.... .+.++..+++|+.|+..+.+.+... ++-.+
T Consensus 59 ~~~Dl~~~~~~---~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~g~ 135 (272)
T PRK08589 59 YHVDISDEQQV---KDFASEIKEQFGRVDVLFNNAGVDNAAGRIHEYPVDVFDKIMAVDMRGTFLMTKMLLPLMMEQGGS 135 (272)
T ss_pred EEeecCCHHHH---HHHHHHHHHHcCCcCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCE
Confidence 99999964210 111111 12468999999997531 1346777899999998777765432 11268
Q ss_pred EEEEecceeecCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcHHHHHHH
Q 010075 157 FVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKT 236 (519)
Q Consensus 157 ~V~vSTa~v~~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~Y~~sK~ 236 (519)
+|++||...+... .....|+.||+
T Consensus 136 iv~isS~~~~~~~--------------------------------------------------------~~~~~Y~asKa 159 (272)
T PRK08589 136 IINTSSFSGQAAD--------------------------------------------------------LYRSGYNAAKG 159 (272)
T ss_pred EEEeCchhhcCCC--------------------------------------------------------CCCchHHHHHH
Confidence 9999987543211 12356999999
Q ss_pred HHHHHHHHh-----hcCCcEEEEecCccccCCCCCCCcccccccccHHHHHHhhcCCceeeccCCCceeeeeeHHHHHHH
Q 010075 237 MGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNA 311 (519)
Q Consensus 237 ~aE~lv~~~-----~~~lp~~IvRPs~V~g~~~~p~~gw~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~d~vpVDdva~a 311 (519)
..+.+++.. ..++.+..+.||.|..+..+...+.... .....+....... .....+...++++++
T Consensus 160 al~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~--~~~~~~~~~~~~~--------~~~~~~~~~~~va~~ 229 (272)
T PRK08589 160 AVINFTKSIAIEYGRDGIRANAIAPGTIETPLVDKLTGTSED--EAGKTFRENQKWM--------TPLGRLGKPEEVAKL 229 (272)
T ss_pred HHHHHHHHHHHHhhhcCeEEEEEecCcccCchhhhhcccchh--hHHHHHhhhhhcc--------CCCCCCcCHHHHHHH
Confidence 999988865 4579999999999876543211110000 0000000000000 011124678999999
Q ss_pred HHHHHHHhccCCCCCcEEEecCC
Q 010075 312 MIVAMVAHAKQPSDANIYHVGSS 334 (519)
Q Consensus 312 ii~a~~~~~~~~~~~~iyni~s~ 334 (519)
++.++..... .-.+.++.+.+|
T Consensus 230 ~~~l~s~~~~-~~~G~~i~vdgg 251 (272)
T PRK08589 230 VVFLASDDSS-FITGETIRIDGG 251 (272)
T ss_pred HHHHcCchhc-CcCCCEEEECCC
Confidence 9888753322 223677777666
|
|
| >PRK12938 acetyacetyl-CoA reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.60 E-value=6.8e-14 Score=136.69 Aligned_cols=220 Identities=10% Similarity=0.087 Sum_probs=138.6
Q ss_pred cCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 010075 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (519)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (519)
+++|+++||||||+||++++++|++.| .+|+++.+.... ..++.. +.++. ...++..
T Consensus 1 ~~~k~~lVtG~s~giG~~~a~~l~~~G---~~vv~~~~~~~~--~~~~~~---------~~~~~---------~~~~~~~ 57 (246)
T PRK12938 1 MSQRIAYVTGGMGGIGTSICQRLHKDG---FKVVAGCGPNSP--RRVKWL---------EDQKA---------LGFDFIA 57 (246)
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHcC---CEEEEEcCCChH--HHHHHH---------HHHHh---------cCCcEEE
Confidence 468999999999999999999999998 566665543211 111111 11111 0245778
Q ss_pred EeccCCCCCCCCChhhhHHHH-------hcCccEEEEcCccCCc-------cccHHHHHHHhHHHHHHHHHHHHh-c--c
Q 010075 90 VPGDISSEDLGLKDSNLKEEL-------WNELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKK-C--V 152 (519)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l-------~~~vdiViH~Aa~v~f-------~~~~~~~~~~Nv~gt~~ll~~a~~-~--~ 152 (519)
+.+|+++. +....+ ..++|+|||+||.... .+.++..+++|+.|+..+++.+.. + .
T Consensus 58 ~~~D~~~~-------~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~ 130 (246)
T PRK12938 58 SEGNVGDW-------DSTKAAFDKVKAEVGEIDVLVNNAGITRDVVFRKMTREDWTAVIDTNLTSLFNVTKQVIDGMVER 130 (246)
T ss_pred EEcCCCCH-------HHHHHHHHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc
Confidence 89999963 222222 2469999999997532 245677899999998777665543 1 2
Q ss_pred CCceEEEEecceeecCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcHHH
Q 010075 153 KLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYV 232 (519)
Q Consensus 153 ~l~~~V~vSTa~v~~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~Y~ 232 (519)
+..++|++||....... .....|+
T Consensus 131 ~~~~iv~isS~~~~~~~--------------------------------------------------------~~~~~y~ 154 (246)
T PRK12938 131 GWGRIINISSVNGQKGQ--------------------------------------------------------FGQTNYS 154 (246)
T ss_pred CCeEEEEEechhccCCC--------------------------------------------------------CCChhHH
Confidence 55789999997533211 1235799
Q ss_pred HHHHHHHHHHHHh-----hcCCcEEEEecCccccCCCCCCCcccccccccHHHHHHhhcCCceeeccCCCceeeeeeHHH
Q 010075 233 FTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDM 307 (519)
Q Consensus 233 ~sK~~aE~lv~~~-----~~~lp~~IvRPs~V~g~~~~p~~gw~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~d~vpVDd 307 (519)
.+|+..+.+++.. ..++++.+++|+.+.++..... ....+...... .....+...++
T Consensus 155 ~sK~a~~~~~~~l~~~~~~~gi~v~~i~pg~~~t~~~~~~---------~~~~~~~~~~~---------~~~~~~~~~~~ 216 (246)
T PRK12938 155 TAKAGIHGFTMSLAQEVATKGVTVNTVSPGYIGTDMVKAI---------RPDVLEKIVAT---------IPVRRLGSPDE 216 (246)
T ss_pred HHHHHHHHHHHHHHHHhhhhCeEEEEEEecccCCchhhhc---------ChHHHHHHHhc---------CCccCCcCHHH
Confidence 9999888776654 3579999999999877643211 01111111111 11223467899
Q ss_pred HHHHHHHHHHHhccCCCCCcEEEecCC
Q 010075 308 VVNAMIVAMVAHAKQPSDANIYHVGSS 334 (519)
Q Consensus 308 va~aii~a~~~~~~~~~~~~iyni~s~ 334 (519)
+++++..++.... ....++++.+.++
T Consensus 217 v~~~~~~l~~~~~-~~~~g~~~~~~~g 242 (246)
T PRK12938 217 IGSIVAWLASEES-GFSTGADFSLNGG 242 (246)
T ss_pred HHHHHHHHcCccc-CCccCcEEEECCc
Confidence 9999988775322 2223567777654
|
|
| >PRK08251 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.60 E-value=3.9e-14 Score=138.53 Aligned_cols=201 Identities=15% Similarity=0.108 Sum_probs=132.4
Q ss_pred CCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEEe
Q 010075 12 NKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVP 91 (519)
Q Consensus 12 ~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v~ 91 (519)
+|+++||||||+||++++++|++.| .+|+++.|+.... +.+. ..+++..+ ..++.++.
T Consensus 2 ~k~vlItGas~giG~~la~~l~~~g---~~v~~~~r~~~~~---~~~~---------~~~~~~~~-------~~~~~~~~ 59 (248)
T PRK08251 2 RQKILITGASSGLGAGMAREFAAKG---RDLALCARRTDRL---EELK---------AELLARYP-------GIKVAVAA 59 (248)
T ss_pred CCEEEEECCCCHHHHHHHHHHHHcC---CEEEEEeCCHHHH---HHHH---------HHHHhhCC-------CceEEEEE
Confidence 6899999999999999999999988 5788888874221 1121 11122111 24688999
Q ss_pred ccCCCCCCCCChhhhHHHHhcCccEEEEcCccCCc-------cccHHHHHHHhHHHHHHHHHHHHhc---cCCceEEEEe
Q 010075 92 GDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKC---VKLKVFVHVS 161 (519)
Q Consensus 92 gDl~~~~lgls~~~~~~~l~~~vdiViH~Aa~v~f-------~~~~~~~~~~Nv~gt~~ll~~a~~~---~~l~~~V~vS 161 (519)
+|++++..-....+.......++|+|||+||.... .+.+...+++|+.|+.++++.+... .+..+||++|
T Consensus 60 ~D~~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~s 139 (248)
T PRK08251 60 LDVNDHDQVFEVFAEFRDELGGLDRVIVNAGIGKGARLGTGKFWANKATAETNFVAALAQCEAAMEIFREQGSGHLVLIS 139 (248)
T ss_pred cCCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCCCCcCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEe
Confidence 99996421000000111123469999999987532 1345667899999999988876431 2567899999
Q ss_pred cceeecCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcHHHHHHHHHHHH
Q 010075 162 TAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEML 241 (519)
Q Consensus 162 Ta~v~~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~Y~~sK~~aE~l 241 (519)
|........ .+...|+.||+..+.+
T Consensus 140 S~~~~~~~~-------------------------------------------------------~~~~~Y~~sK~a~~~~ 164 (248)
T PRK08251 140 SVSAVRGLP-------------------------------------------------------GVKAAYAASKAGVASL 164 (248)
T ss_pred ccccccCCC-------------------------------------------------------CCcccHHHHHHHHHHH
Confidence 964432110 1235799999998888
Q ss_pred HHHh-----hcCCcEEEEecCccccCCCCCCCcccccccccHHHHHHhhcCCceeeccCCCceeeeeeHHHHHHHHHHHH
Q 010075 242 MQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMIVAM 316 (519)
Q Consensus 242 v~~~-----~~~lp~~IvRPs~V~g~~~~p~~gw~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~d~vpVDdva~aii~a~ 316 (519)
.+.. ..++++++++||.|.++..... + . ....++.+++|++++.++
T Consensus 165 ~~~l~~~~~~~~i~v~~v~pg~v~t~~~~~~-------------------~-------~---~~~~~~~~~~a~~i~~~~ 215 (248)
T PRK08251 165 GEGLRAELAKTPIKVSTIEPGYIRSEMNAKA-------------------K-------S---TPFMVDTETGVKALVKAI 215 (248)
T ss_pred HHHHHHHhcccCcEEEEEecCcCcchhhhcc-------------------c-------c---CCccCCHHHHHHHHHHHH
Confidence 7654 3478999999999876532100 0 0 012477899999999988
Q ss_pred HH
Q 010075 317 VA 318 (519)
Q Consensus 317 ~~ 318 (519)
.+
T Consensus 216 ~~ 217 (248)
T PRK08251 216 EK 217 (248)
T ss_pred hc
Confidence 63
|
|
| >PRK06196 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=99.60 E-value=2.8e-14 Score=145.16 Aligned_cols=175 Identities=16% Similarity=0.139 Sum_probs=117.1
Q ss_pred cCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 010075 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (519)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (519)
+++|+|+||||||+||++++++|++.| .+|+++.|+.... +.+.++ ..++.+
T Consensus 24 l~~k~vlITGasggIG~~~a~~L~~~G---~~Vv~~~R~~~~~---~~~~~~----------------------l~~v~~ 75 (315)
T PRK06196 24 LSGKTAIVTGGYSGLGLETTRALAQAG---AHVIVPARRPDVA---REALAG----------------------IDGVEV 75 (315)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCC---CEEEEEeCCHHHH---HHHHHH----------------------hhhCeE
Confidence 478999999999999999999999988 5788888864211 111100 023678
Q ss_pred EeccCCCCCCCCChhhhHHHHh-------cCccEEEEcCccCCc-----cccHHHHHHHhHHHHHHHHHHH----HhccC
Q 010075 90 VPGDISSEDLGLKDSNLKEELW-------NELDIMVNSAAITKF-----DERYDVAFGINTLGVIHLVNFA----KKCVK 153 (519)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~-------~~vdiViH~Aa~v~f-----~~~~~~~~~~Nv~gt~~ll~~a----~~~~~ 153 (519)
+.+|++++ +..+.+. .++|+|||+||.... .+.++..+++|+.|+..+++.+ ++. +
T Consensus 76 ~~~Dl~d~-------~~v~~~~~~~~~~~~~iD~li~nAg~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~ll~~l~~~-~ 147 (315)
T PRK06196 76 VMLDLADL-------ESVRAFAERFLDSGRRIDILINNAGVMACPETRVGDGWEAQFATNHLGHFALVNLLWPALAAG-A 147 (315)
T ss_pred EEccCCCH-------HHHHHHHHHHHhcCCCCCEEEECCCCCCCCCccCCccHHHHHHHhhHHHHHHHHHHHHHHHhc-C
Confidence 99999963 2222222 469999999996432 2457888999999976666544 332 3
Q ss_pred CceEEEEecceeecCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcHHHH
Q 010075 154 LKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVF 233 (519)
Q Consensus 154 l~~~V~vSTa~v~~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~Y~~ 233 (519)
..++|++||....... ..+....... ...+...|+.
T Consensus 148 ~~~iV~vSS~~~~~~~---~~~~~~~~~~-----------------------------------------~~~~~~~Y~~ 183 (315)
T PRK06196 148 GARVVALSSAGHRRSP---IRWDDPHFTR-----------------------------------------GYDKWLAYGQ 183 (315)
T ss_pred CCeEEEECCHHhccCC---CCccccCccC-----------------------------------------CCChHHHHHH
Confidence 4689999997432211 0000000000 0122357999
Q ss_pred HHHHHHHHHHHh-----hcCCcEEEEecCccccCCC
Q 010075 234 TKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYK 264 (519)
Q Consensus 234 sK~~aE~lv~~~-----~~~lp~~IvRPs~V~g~~~ 264 (519)
||+..+.+.+.. ..++.+++++||.|.++..
T Consensus 184 SK~a~~~~~~~la~~~~~~gi~v~~v~PG~v~t~~~ 219 (315)
T PRK06196 184 SKTANALFAVHLDKLGKDQGVRAFSVHPGGILTPLQ 219 (315)
T ss_pred HHHHHHHHHHHHHHHhcCCCcEEEEeeCCcccCCcc
Confidence 999999887654 3579999999999988754
|
|
| >PRK05650 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.60 E-value=1.2e-13 Score=137.26 Aligned_cols=201 Identities=14% Similarity=0.144 Sum_probs=130.3
Q ss_pred CEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEEec
Q 010075 13 KTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVPG 92 (519)
Q Consensus 13 k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v~g 92 (519)
|+|+||||||+||+.++++|++.| .+|++..|+... .+.+. +.++.. ..++.++.+
T Consensus 1 ~~vlVtGasggIG~~la~~l~~~g---~~V~~~~r~~~~---~~~~~---------~~l~~~---------~~~~~~~~~ 56 (270)
T PRK05650 1 NRVMITGAASGLGRAIALRWAREG---WRLALADVNEEG---GEETL---------KLLREA---------GGDGFYQRC 56 (270)
T ss_pred CEEEEecCCChHHHHHHHHHHHCC---CEEEEEeCCHHH---HHHHH---------HHHHhc---------CCceEEEEc
Confidence 579999999999999999999988 577888876422 11111 111111 246788999
Q ss_pred cCCCCCCCCChhhhHHHHh-------cCccEEEEcCccCCc-------cccHHHHHHHhHHHHHHHHHHH----HhccCC
Q 010075 93 DISSEDLGLKDSNLKEELW-------NELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFA----KKCVKL 154 (519)
Q Consensus 93 Dl~~~~lgls~~~~~~~l~-------~~vdiViH~Aa~v~f-------~~~~~~~~~~Nv~gt~~ll~~a----~~~~~l 154 (519)
|++++. + ...+. .++|+|||+||.... .+.++..+++|+.|+..+.+.+ ++. +.
T Consensus 57 D~~~~~------~-~~~~~~~i~~~~~~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~ 128 (270)
T PRK05650 57 DVRDYS------Q-LTALAQACEEKWGGIDVIVNNAGVASGGFFEELSLEDWDWQIAINLMGVVKGCKAFLPLFKRQ-KS 128 (270)
T ss_pred cCCCHH------H-HHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhC-CC
Confidence 999632 2 22322 369999999997642 1456667899998888766654 443 56
Q ss_pred ceEEEEecceeecCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcHHHHH
Q 010075 155 KVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFT 234 (519)
Q Consensus 155 ~~~V~vSTa~v~~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~Y~~s 234 (519)
.++|++||....... .....|+.+
T Consensus 129 ~~iv~vsS~~~~~~~--------------------------------------------------------~~~~~Y~~s 152 (270)
T PRK05650 129 GRIVNIASMAGLMQG--------------------------------------------------------PAMSSYNVA 152 (270)
T ss_pred CEEEEECChhhcCCC--------------------------------------------------------CCchHHHHH
Confidence 789999997554321 123579999
Q ss_pred HHHHHHHHHHh-----hcCCcEEEEecCccccCCCCCCCcccccccccHHHHHHhhcCCceeeccCCCceeeeeeHHHHH
Q 010075 235 KTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVV 309 (519)
Q Consensus 235 K~~aE~lv~~~-----~~~lp~~IvRPs~V~g~~~~p~~gw~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~d~vpVDdva 309 (519)
|+..+.+.+.+ ..++.+++++||.+.++......+... .....+.... ....++++|+|
T Consensus 153 Kaa~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~---~~~~~~~~~~-------------~~~~~~~~~vA 216 (270)
T PRK05650 153 KAGVVALSETLLVELADDEIGVHVVCPSFFQTNLLDSFRGPNP---AMKAQVGKLL-------------EKSPITAADIA 216 (270)
T ss_pred HHHHHHHHHHHHHHhcccCcEEEEEecCccccCcccccccCch---hHHHHHHHHh-------------hcCCCCHHHHH
Confidence 99866665443 357999999999998765432111100 0001111110 11247899999
Q ss_pred HHHHHHHH
Q 010075 310 NAMIVAMV 317 (519)
Q Consensus 310 ~aii~a~~ 317 (519)
+.++.++.
T Consensus 217 ~~i~~~l~ 224 (270)
T PRK05650 217 DYIYQQVA 224 (270)
T ss_pred HHHHHHHh
Confidence 99999986
|
|
| >PRK07856 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.60 E-value=4.3e-14 Score=138.80 Aligned_cols=216 Identities=14% Similarity=0.058 Sum_probs=143.6
Q ss_pred cCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 010075 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (519)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (519)
+++|+++||||||+||+++++.|++.| .+|+++.|+... .. ...++.+
T Consensus 4 ~~~k~~lItGas~gIG~~la~~l~~~g---~~v~~~~r~~~~-----~~------------------------~~~~~~~ 51 (252)
T PRK07856 4 LTGRVVLVTGGTRGIGAGIARAFLAAG---ATVVVCGRRAPE-----TV------------------------DGRPAEF 51 (252)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCC---CEEEEEeCChhh-----hh------------------------cCCceEE
Confidence 568999999999999999999999988 578888886432 00 0246788
Q ss_pred EeccCCCCCCCCChhhhHHHHh-------cCccEEEEcCccCCc-------cccHHHHHHHhHHHHHHHHHHHHh-c---
Q 010075 90 VPGDISSEDLGLKDSNLKEELW-------NELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKK-C--- 151 (519)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~-------~~vdiViH~Aa~v~f-------~~~~~~~~~~Nv~gt~~ll~~a~~-~--- 151 (519)
+.+|++++ +..+.++ .++|+|||+||.... .+.++..+++|+.|+..+++.+.. +
T Consensus 52 ~~~D~~~~-------~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~ 124 (252)
T PRK07856 52 HAADVRDP-------DQVAALVDAIVERHGRLDVLVNNAGGSPYALAAEASPRFHEKIVELNLLAPLLVAQAANAVMQQQ 124 (252)
T ss_pred EEccCCCH-------HHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc
Confidence 99999963 2222332 357999999986432 145677899999999999998764 2
Q ss_pred cCCceEEEEecceeecCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcHH
Q 010075 152 VKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTY 231 (519)
Q Consensus 152 ~~l~~~V~vSTa~v~~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~Y 231 (519)
.+..++|++||....... .....|
T Consensus 125 ~~~g~ii~isS~~~~~~~--------------------------------------------------------~~~~~Y 148 (252)
T PRK07856 125 PGGGSIVNIGSVSGRRPS--------------------------------------------------------PGTAAY 148 (252)
T ss_pred CCCcEEEEEcccccCCCC--------------------------------------------------------CCCchh
Confidence 133689999997543211 123579
Q ss_pred HHHHHHHHHHHHHh----hcCCcEEEEecCccccCCCCCCCcccccccccHHHHHHhhcCCceeeccCCCceeeeeeHHH
Q 010075 232 VFTKTMGEMLMQQS----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDM 307 (519)
Q Consensus 232 ~~sK~~aE~lv~~~----~~~lp~~IvRPs~V~g~~~~p~~gw~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~d~vpVDd 307 (519)
+.||+..|.+++.. .+.+.+..++||.|..+..... + ...........+. ....+...++
T Consensus 149 ~~sK~a~~~l~~~la~e~~~~i~v~~i~Pg~v~t~~~~~~--~-----~~~~~~~~~~~~~---------~~~~~~~p~~ 212 (252)
T PRK07856 149 GAAKAGLLNLTRSLAVEWAPKVRVNAVVVGLVRTEQSELH--Y-----GDAEGIAAVAATV---------PLGRLATPAD 212 (252)
T ss_pred HHHHHHHHHHHHHHHHHhcCCeEEEEEEeccccChHHhhh--c-----cCHHHHHHHhhcC---------CCCCCcCHHH
Confidence 99999999998765 2348899999998876543111 0 0001111111111 1122456789
Q ss_pred HHHHHHHHHHHhccCCCCCcEEEecCCCCC
Q 010075 308 VVNAMIVAMVAHAKQPSDANIYHVGSSLRN 337 (519)
Q Consensus 308 va~aii~a~~~~~~~~~~~~iyni~s~~~~ 337 (519)
++++++.++.... ..-.+.++.+.+|...
T Consensus 213 va~~~~~L~~~~~-~~i~G~~i~vdgg~~~ 241 (252)
T PRK07856 213 IAWACLFLASDLA-SYVSGANLEVHGGGER 241 (252)
T ss_pred HHHHHHHHcCccc-CCccCCEEEECCCcch
Confidence 9999888875322 2224678888777543
|
|
| >PRK08017 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=99.60 E-value=4.3e-14 Score=138.86 Aligned_cols=200 Identities=15% Similarity=0.100 Sum_probs=129.6
Q ss_pred CEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEEec
Q 010075 13 KTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVPG 92 (519)
Q Consensus 13 k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v~g 92 (519)
++|+||||||+||+++++.|++.| .+|+++.|+.... +.+. ..++..+.+
T Consensus 3 k~vlVtGasg~IG~~la~~l~~~g---~~v~~~~r~~~~~---~~~~------------------------~~~~~~~~~ 52 (256)
T PRK08017 3 KSVLITGCSSGIGLEAALELKRRG---YRVLAACRKPDDV---ARMN------------------------SLGFTGILL 52 (256)
T ss_pred CEEEEECCCChHHHHHHHHHHHCC---CEEEEEeCCHHHh---HHHH------------------------hCCCeEEEe
Confidence 689999999999999999999988 5788888864211 1111 124678899
Q ss_pred cCCCCCCCCChhhhHHHH----hcCccEEEEcCccCCc-------cccHHHHHHHhHHHHHHH----HHHHHhccCCceE
Q 010075 93 DISSEDLGLKDSNLKEEL----WNELDIMVNSAAITKF-------DERYDVAFGINTLGVIHL----VNFAKKCVKLKVF 157 (519)
Q Consensus 93 Dl~~~~lgls~~~~~~~l----~~~vdiViH~Aa~v~f-------~~~~~~~~~~Nv~gt~~l----l~~a~~~~~l~~~ 157 (519)
|+++++.- .+..+.+ ...+|.|+|+||.... .+.++..+++|+.|+.++ ++.+++. +.+++
T Consensus 53 D~~~~~~~---~~~~~~i~~~~~~~~~~ii~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~-~~~~i 128 (256)
T PRK08017 53 DLDDPESV---ERAADEVIALTDNRLYGLFNNAGFGVYGPLSTISRQQMEQQFSTNFFGTHQLTMLLLPAMLPH-GEGRI 128 (256)
T ss_pred ecCCHHHH---HHHHHHHHHhcCCCCeEEEECCCCCCccchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhc-CCCEE
Confidence 99863210 1111111 1458999999996432 234667899999998876 4555543 56789
Q ss_pred EEEecceeecCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcHHHHHHHH
Q 010075 158 VHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTM 237 (519)
Q Consensus 158 V~vSTa~v~~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~Y~~sK~~ 237 (519)
|++||.+..... .....|+.||+.
T Consensus 129 v~~ss~~~~~~~--------------------------------------------------------~~~~~Y~~sK~~ 152 (256)
T PRK08017 129 VMTSSVMGLIST--------------------------------------------------------PGRGAYAASKYA 152 (256)
T ss_pred EEEcCcccccCC--------------------------------------------------------CCccHHHHHHHH
Confidence 999997443211 123579999999
Q ss_pred HHHHHHHh-----hcCCcEEEEecCccccCCCCCCCcccccccccHHHHHHhhcCCceeeccCCCceeeeeeHHHHHHHH
Q 010075 238 GEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAM 312 (519)
Q Consensus 238 aE~lv~~~-----~~~lp~~IvRPs~V~g~~~~p~~gw~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~d~vpVDdva~ai 312 (519)
.|.+.+.. ..+++++++|||.+.+.......... . .......+....+++++||+++++
T Consensus 153 ~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~~~~~~---------------~-~~~~~~~~~~~~~~~~~~d~a~~~ 216 (256)
T PRK08017 153 LEAWSDALRMELRHSGIKVSLIEPGPIRTRFTDNVNQTQ---------------S-DKPVENPGIAARFTLGPEAVVPKL 216 (256)
T ss_pred HHHHHHHHHHHHhhcCCEEEEEeCCCcccchhhcccchh---------------h-ccchhhhHHHhhcCCCHHHHHHHH
Confidence 99887643 45799999999877554221100000 0 000111122234579999999999
Q ss_pred HHHHHH
Q 010075 313 IVAMVA 318 (519)
Q Consensus 313 i~a~~~ 318 (519)
..++.+
T Consensus 217 ~~~~~~ 222 (256)
T PRK08017 217 RHALES 222 (256)
T ss_pred HHHHhC
Confidence 999863
|
|
| >PRK05565 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.60 E-value=1.3e-13 Score=134.37 Aligned_cols=219 Identities=20% Similarity=0.244 Sum_probs=140.4
Q ss_pred cCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEE-EecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceE
Q 010075 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLF-VRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKIT 88 (519)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~L-vR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~ 88 (519)
+.+++|+||||||+||+.+++.|++.| .+|+++ .|+... .+.+.+ .+.. ...++.
T Consensus 3 ~~~~~ilI~Gasg~iG~~la~~l~~~g---~~v~~~~~r~~~~---~~~~~~---------~~~~---------~~~~~~ 58 (247)
T PRK05565 3 LMGKVAIVTGASGGIGRAIAELLAKEG---AKVVIAYDINEEA---AQELLE---------EIKE---------EGGDAI 58 (247)
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCC---CEEEEEcCCCHHH---HHHHHH---------HHHh---------cCCeEE
Confidence 457899999999999999999999987 567777 665322 111111 1111 024688
Q ss_pred EEeccCCCCCCCCChhhhHHHHh-------cCccEEEEcCccCCc-------cccHHHHHHHhHHHHHHHHHHHHhc---
Q 010075 89 FVPGDISSEDLGLKDSNLKEELW-------NELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKC--- 151 (519)
Q Consensus 89 ~v~gDl~~~~lgls~~~~~~~l~-------~~vdiViH~Aa~v~f-------~~~~~~~~~~Nv~gt~~ll~~a~~~--- 151 (519)
++.+|+++++ ....++ .++|+|||+||.... .+.++..+++|+.|+.++++.+...
T Consensus 59 ~~~~D~~~~~-------~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~ 131 (247)
T PRK05565 59 AVKADVSSEE-------DVENLVEQIVEKFGKIDILVNNAGISNFGLVTDMTDEEWDRVIDVNLTGVMLLTRYALPYMIK 131 (247)
T ss_pred EEECCCCCHH-------HHHHHHHHHHHHhCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHh
Confidence 9999999642 222322 279999999998632 2356778999999998888877542
Q ss_pred cCCceEEEEecceeecCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcHH
Q 010075 152 VKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTY 231 (519)
Q Consensus 152 ~~l~~~V~vSTa~v~~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~Y 231 (519)
.+.++||++||....... .....|
T Consensus 132 ~~~~~~v~~sS~~~~~~~--------------------------------------------------------~~~~~y 155 (247)
T PRK05565 132 RKSGVIVNISSIWGLIGA--------------------------------------------------------SCEVLY 155 (247)
T ss_pred cCCcEEEEECCHhhccCC--------------------------------------------------------CCccHH
Confidence 245679999987543211 112359
Q ss_pred HHHHHHHHHHHHHh-----hcCCcEEEEecCccccCCCCCCCcccccccccHHHHHHhhcCCceeeccCCCceeeeeeHH
Q 010075 232 VFTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVD 306 (519)
Q Consensus 232 ~~sK~~aE~lv~~~-----~~~lp~~IvRPs~V~g~~~~p~~gw~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~d~vpVD 306 (519)
+.+|+..+.+++.. ..+++++++|||.+.++.....+ ......... ......+...+
T Consensus 156 ~~sK~a~~~~~~~~~~~~~~~gi~~~~v~pg~v~t~~~~~~~---------~~~~~~~~~---------~~~~~~~~~~~ 217 (247)
T PRK05565 156 SASKGAVNAFTKALAKELAPSGIRVNAVAPGAIDTEMWSSFS---------EEDKEGLAE---------EIPLGRLGKPE 217 (247)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCeEEEEEEECCccCccccccC---------hHHHHHHHh---------cCCCCCCCCHH
Confidence 99998877776654 45899999999998665432111 000111110 00112356789
Q ss_pred HHHHHHHHHHHHhccCCCCCcEEEecCC
Q 010075 307 MVVNAMIVAMVAHAKQPSDANIYHVGSS 334 (519)
Q Consensus 307 dva~aii~a~~~~~~~~~~~~iyni~s~ 334 (519)
+++++++.++..... .-.++++++..+
T Consensus 218 ~va~~~~~l~~~~~~-~~~g~~~~~~~~ 244 (247)
T PRK05565 218 EIAKVVLFLASDDAS-YITGQIITVDGG 244 (247)
T ss_pred HHHHHHHHHcCCccC-CccCcEEEecCC
Confidence 999999888864322 223677777665
|
|
| >PRK12748 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.60 E-value=6.4e-14 Score=137.96 Aligned_cols=225 Identities=12% Similarity=0.085 Sum_probs=140.2
Q ss_pred CCCEEEEeCCcc--HHHHHHHHHHHHhCCCccEEEEEEecCCccc------HHH--HHHHHHhhhhhHHHHHhhhccccc
Q 010075 11 ENKTILVSGVTG--FVAKVFIEKILRVQPNVKKLYLFVRAADIDS------AAL--RFQNEVLAKDVFNVLKEKWGTRLN 80 (519)
Q Consensus 11 ~~k~VlITGaTG--FlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~------~~~--rl~~~~~~~~~f~~l~~~~~~~~~ 80 (519)
++++|+|||||| .||.+++++|++.| .+|+++.|+..+.. ..+ .+.++ +. .
T Consensus 4 ~~k~vlItGas~~~giG~~la~~l~~~G---~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~---------~~-~------ 64 (256)
T PRK12748 4 MKKIALVTGASRLNGIGAAVCRRLAAKG---IDIFFTYWSPYDKTMPWGMHDKEPVLLKEE---------IE-S------ 64 (256)
T ss_pred CCcEEEEeCCCCCCCHHHHHHHHHHHcC---CcEEEEcCCccccccccccchhhHHHHHHH---------HH-h------
Confidence 679999999996 69999999999988 57888888732110 000 01110 11 0
Q ss_pred cccCCceEEEeccCCCCCCCCChhhhHHHHhcCccEEEEcCccCCcc-------ccHHHHHHHhHHHHHHHHHHHHhc--
Q 010075 81 SFISEKITFVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKFD-------ERYDVAFGINTLGVIHLVNFAKKC-- 151 (519)
Q Consensus 81 ~~~~~~v~~v~gDl~~~~lgls~~~~~~~l~~~vdiViH~Aa~v~f~-------~~~~~~~~~Nv~gt~~ll~~a~~~-- 151 (519)
...+++++.+|+++++--....+........+|+|||+||..... +.++..+++|+.|+..+++.+.+.
T Consensus 65 --~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~ 142 (256)
T PRK12748 65 --YGVRCEHMEIDLSQPYAPNRVFYAVSERLGDPSILINNAAYSTHTRLEELTAEQLDKHYAVNVRATMLLSSAFAKQYD 142 (256)
T ss_pred --cCCeEEEEECCCCCHHHHHHHHHHHHHhCCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHhh
Confidence 124688999999964210000011111224689999999875321 346777999999999999887542
Q ss_pred -cCCceEEEEecceeecCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcH
Q 010075 152 -VKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNT 230 (519)
Q Consensus 152 -~~l~~~V~vSTa~v~~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~ 230 (519)
.+..++|++||...++.. .....
T Consensus 143 ~~~~~~iv~~ss~~~~~~~--------------------------------------------------------~~~~~ 166 (256)
T PRK12748 143 GKAGGRIINLTSGQSLGPM--------------------------------------------------------PDELA 166 (256)
T ss_pred hcCCeEEEEECCccccCCC--------------------------------------------------------CCchH
Confidence 134689999997654321 11246
Q ss_pred HHHHHHHHHHHHHHh-----hcCCcEEEEecCccccCCCCCCCcccccccccHHHHHHhhcCCceeeccCCCceeeeeeH
Q 010075 231 YVFTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPV 305 (519)
Q Consensus 231 Y~~sK~~aE~lv~~~-----~~~lp~~IvRPs~V~g~~~~p~~gw~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~d~vpV 305 (519)
|+.+|+..|.+++.. ..+++++.++||.+..+... +. ..... .. ..+. ..+...
T Consensus 167 Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~Pg~~~t~~~~------~~------~~~~~-~~---~~~~-----~~~~~~ 225 (256)
T PRK12748 167 YAATKGAIEAFTKSLAPELAEKGITVNAVNPGPTDTGWIT------EE------LKHHL-VP---KFPQ-----GRVGEP 225 (256)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCeEEEEEEeCcccCCCCC------hh------HHHhh-hc---cCCC-----CCCcCH
Confidence 999999999988764 35799999999977654321 00 00000 00 0011 123456
Q ss_pred HHHHHHHHHHHHHhccCCCCCcEEEecCC
Q 010075 306 DMVVNAMIVAMVAHAKQPSDANIYHVGSS 334 (519)
Q Consensus 306 Ddva~aii~a~~~~~~~~~~~~iyni~s~ 334 (519)
++++.++..++.... ....+.++++.++
T Consensus 226 ~~~a~~~~~l~~~~~-~~~~g~~~~~d~g 253 (256)
T PRK12748 226 VDAARLIAFLVSEEA-KWITGQVIHSEGG 253 (256)
T ss_pred HHHHHHHHHHhCccc-ccccCCEEEecCC
Confidence 899999887765322 2223678888766
|
|
| >PRK12824 acetoacetyl-CoA reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.60 E-value=7.1e-14 Score=136.20 Aligned_cols=217 Identities=13% Similarity=0.138 Sum_probs=141.9
Q ss_pred CEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEEec
Q 010075 13 KTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVPG 92 (519)
Q Consensus 13 k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v~g 92 (519)
|+++||||+|+||+++++.|++.| .+|+++.|+.. ....++.. ... ....++.++.+
T Consensus 3 k~vlItG~s~~iG~~la~~l~~~g---~~vi~~~r~~~--~~~~~~~~-------------~~~-----~~~~~~~~~~~ 59 (245)
T PRK12824 3 KIALVTGAKRGIGSAIARELLNDG---YRVIATYFSGN--DCAKDWFE-------------EYG-----FTEDQVRLKEL 59 (245)
T ss_pred CEEEEeCCCchHHHHHHHHHHHcC---CEEEEEeCCcH--HHHHHHHH-------------Hhh-----ccCCeEEEEEc
Confidence 689999999999999999999988 57899988753 11111110 000 01256889999
Q ss_pred cCCCCCCCCChhhhHHHH-------hcCccEEEEcCccCCc-------cccHHHHHHHhHHHHHHHHHHH----HhccCC
Q 010075 93 DISSEDLGLKDSNLKEEL-------WNELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFA----KKCVKL 154 (519)
Q Consensus 93 Dl~~~~lgls~~~~~~~l-------~~~vdiViH~Aa~v~f-------~~~~~~~~~~Nv~gt~~ll~~a----~~~~~l 154 (519)
|++++ +....+ ..++|+|||+|+.... .+.++..+++|+.|+.++.+.+ ++. +.
T Consensus 60 D~~~~-------~~v~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~ 131 (245)
T PRK12824 60 DVTDT-------EECAEALAEIEEEEGPVDILVNNAGITRDSVFKRMSHQEWNDVINTNLNSVFNVTQPLFAAMCEQ-GY 131 (245)
T ss_pred CCCCH-------HHHHHHHHHHHHHcCCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHh-CC
Confidence 99963 222222 2359999999997532 2456778899999998885544 432 56
Q ss_pred ceEEEEecceeecCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcHHHHH
Q 010075 155 KVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFT 234 (519)
Q Consensus 155 ~~~V~vSTa~v~~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~Y~~s 234 (519)
.+||++||...+... .....|+.+
T Consensus 132 ~~iv~iss~~~~~~~--------------------------------------------------------~~~~~Y~~s 155 (245)
T PRK12824 132 GRIINISSVNGLKGQ--------------------------------------------------------FGQTNYSAA 155 (245)
T ss_pred eEEEEECChhhccCC--------------------------------------------------------CCChHHHHH
Confidence 799999997654321 112369999
Q ss_pred HHHHHHHHHHh-----hcCCcEEEEecCccccCCCCCCCcccccccccHHHHHHhhcCCceeeccCCCceeeeeeHHHHH
Q 010075 235 KTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVV 309 (519)
Q Consensus 235 K~~aE~lv~~~-----~~~lp~~IvRPs~V~g~~~~p~~gw~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~d~vpVDdva 309 (519)
|+..+.+++.+ ..++++.+++|+.+.++...... ......+... .....+..+++++
T Consensus 156 K~a~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~~~---------~~~~~~~~~~---------~~~~~~~~~~~va 217 (245)
T PRK12824 156 KAGMIGFTKALASEGARYGITVNCIAPGYIATPMVEQMG---------PEVLQSIVNQ---------IPMKRLGTPEEIA 217 (245)
T ss_pred HHHHHHHHHHHHHHHHHhCeEEEEEEEcccCCcchhhcC---------HHHHHHHHhc---------CCCCCCCCHHHHH
Confidence 99888877654 34799999999998876542211 1111111111 1122345789999
Q ss_pred HHHHHHHHHhccCCCCCcEEEecCCC
Q 010075 310 NAMIVAMVAHAKQPSDANIYHVGSSL 335 (519)
Q Consensus 310 ~aii~a~~~~~~~~~~~~iyni~s~~ 335 (519)
+++..++..... .-.++++++.+|.
T Consensus 218 ~~~~~l~~~~~~-~~~G~~~~~~~g~ 242 (245)
T PRK12824 218 AAVAFLVSEAAG-FITGETISINGGL 242 (245)
T ss_pred HHHHHHcCcccc-CccCcEEEECCCe
Confidence 998877743222 2247889998873
|
|
| >PRK08642 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.60 E-value=1.1e-13 Score=135.54 Aligned_cols=217 Identities=12% Similarity=0.129 Sum_probs=140.5
Q ss_pred CCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEE
Q 010075 11 ENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFV 90 (519)
Q Consensus 11 ~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v 90 (519)
++|+|+||||+|+||++++++|++.| .+|++..|.... ..+++. .+. ..++.++
T Consensus 4 ~~k~ilItGas~gIG~~la~~l~~~G---~~vv~~~~~~~~--~~~~~~-------------~~~--------~~~~~~~ 57 (253)
T PRK08642 4 SEQTVLVTGGSRGLGAAIARAFAREG---ARVVVNYHQSED--AAEALA-------------DEL--------GDRAIAL 57 (253)
T ss_pred CCCEEEEeCCCCcHHHHHHHHHHHCC---CeEEEEcCCCHH--HHHHHH-------------HHh--------CCceEEE
Confidence 57899999999999999999999988 466665554321 112221 111 2468889
Q ss_pred eccCCCCCCCCChhhhHHHHh-------cC-ccEEEEcCccCC---------c----cccHHHHHHHhHHHHHHHHHHHH
Q 010075 91 PGDISSEDLGLKDSNLKEELW-------NE-LDIMVNSAAITK---------F----DERYDVAFGINTLGVIHLVNFAK 149 (519)
Q Consensus 91 ~gDl~~~~lgls~~~~~~~l~-------~~-vdiViH~Aa~v~---------f----~~~~~~~~~~Nv~gt~~ll~~a~ 149 (519)
.+|+++++ + ...++ .. +|+|||+|+... + .+.+...+++|+.|+..+++.+.
T Consensus 58 ~~D~~~~~------~-~~~~~~~~~~~~g~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~ 130 (253)
T PRK08642 58 QADVTDRE------Q-VQAMFATATEHFGKPITTVVNNALADFSFDGDARKKADDITWEDFQQQLEGSVKGALNTIQAAL 130 (253)
T ss_pred EcCCCCHH------H-HHHHHHHHHHHhCCCCeEEEECCCccccccccCCCCcccCCHHHHHHHHhhhhhHHHHHHHHHH
Confidence 99999632 2 22222 23 999999997521 1 13466779999999999999886
Q ss_pred hc---cCCceEEEEecceeecCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCC
Q 010075 150 KC---VKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHG 226 (519)
Q Consensus 150 ~~---~~l~~~V~vSTa~v~~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~ 226 (519)
.. .+..++|++||...... . .
T Consensus 131 ~~~~~~~~g~iv~iss~~~~~~---------~-----------------------------------------------~ 154 (253)
T PRK08642 131 PGMREQGFGRIINIGTNLFQNP---------V-----------------------------------------------V 154 (253)
T ss_pred HHHHhcCCeEEEEECCccccCC---------C-----------------------------------------------C
Confidence 31 24568999998532110 0 2
Q ss_pred CCcHHHHHHHHHHHHHHHh-----hcCCcEEEEecCccccCCCCCCCcccccccccHHHHHHhhcCCceeeccCCCceee
Q 010075 227 WPNTYVFTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMD 301 (519)
Q Consensus 227 ~~n~Y~~sK~~aE~lv~~~-----~~~lp~~IvRPs~V~g~~~~p~~gw~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~d 301 (519)
+.+.|+.||+..|.+++.+ ..++.+..++||.+..+... .. ............ . ....
T Consensus 155 ~~~~Y~~sK~a~~~l~~~la~~~~~~~i~v~~i~pG~v~t~~~~---~~-----~~~~~~~~~~~~-~--------~~~~ 217 (253)
T PRK08642 155 PYHDYTTAKAALLGLTRNLAAELGPYGITVNMVSGGLLRTTDAS---AA-----TPDEVFDLIAAT-T--------PLRK 217 (253)
T ss_pred CccchHHHHHHHHHHHHHHHHHhCccCeEEEEEeecccCCchhh---cc-----CCHHHHHHHHhc-C--------CcCC
Confidence 2457999999999999876 34689999999988664221 10 111111111111 1 1134
Q ss_pred eeeHHHHHHHHHHHHHHhccCCCCCcEEEecCC
Q 010075 302 VIPVDMVVNAMIVAMVAHAKQPSDANIYHVGSS 334 (519)
Q Consensus 302 ~vpVDdva~aii~a~~~~~~~~~~~~iyni~s~ 334 (519)
+.+.+|+++++..++.... ..-.+.++.+.+|
T Consensus 218 ~~~~~~va~~~~~l~~~~~-~~~~G~~~~vdgg 249 (253)
T PRK08642 218 VTTPQEFADAVLFFASPWA-RAVTGQNLVVDGG 249 (253)
T ss_pred CCCHHHHHHHHHHHcCchh-cCccCCEEEeCCC
Confidence 7889999999998886332 2224677777665
|
|
| >PRK07478 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.59 E-value=1.5e-13 Score=135.16 Aligned_cols=222 Identities=13% Similarity=0.078 Sum_probs=140.5
Q ss_pred cCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 010075 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (519)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (519)
+++|+++||||||+||.++++.|++.| .+|+++.|+... .+.+.+ .+++. ..++.+
T Consensus 4 ~~~k~~lItGas~giG~~ia~~l~~~G---~~v~~~~r~~~~---~~~~~~---------~~~~~---------~~~~~~ 59 (254)
T PRK07478 4 LNGKVAIITGASSGIGRAAAKLFAREG---AKVVVGARRQAE---LDQLVA---------EIRAE---------GGEAVA 59 (254)
T ss_pred CCCCEEEEeCCCChHHHHHHHHHHHCC---CEEEEEeCCHHH---HHHHHH---------HHHhc---------CCcEEE
Confidence 468999999999999999999999988 578999987532 122211 11111 246788
Q ss_pred EeccCCCCCCCCChhhhHHHHh-------cCccEEEEcCccCCc--------cccHHHHHHHhHHHHHHHHHHHHhc---
Q 010075 90 VPGDISSEDLGLKDSNLKEELW-------NELDIMVNSAAITKF--------DERYDVAFGINTLGVIHLVNFAKKC--- 151 (519)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~-------~~vdiViH~Aa~v~f--------~~~~~~~~~~Nv~gt~~ll~~a~~~--- 151 (519)
+.+|+++++ ..+.++ .++|++||+||.... .+.++..+++|+.|+..+.+.+...
T Consensus 60 ~~~D~~~~~-------~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~ 132 (254)
T PRK07478 60 LAGDVRDEA-------YAKALVALAVERFGGLDIAFNNAGTLGEMGPVAEMSLEGWRETLATNLTSAFLGAKHQIPAMLA 132 (254)
T ss_pred EEcCCCCHH-------HHHHHHHHHHHhcCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHh
Confidence 999999632 222332 369999999997431 1456788999999888776654321
Q ss_pred cCCceEEEEecceeecCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcHH
Q 010075 152 VKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTY 231 (519)
Q Consensus 152 ~~l~~~V~vSTa~v~~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~Y 231 (519)
.+..++|++||...+.... .....|
T Consensus 133 ~~~~~iv~~sS~~~~~~~~-------------------------------------------------------~~~~~Y 157 (254)
T PRK07478 133 RGGGSLIFTSTFVGHTAGF-------------------------------------------------------PGMAAY 157 (254)
T ss_pred cCCceEEEEechHhhccCC-------------------------------------------------------CCcchh
Confidence 2456899999975432100 123579
Q ss_pred HHHHHHHHHHHHHh-----hcCCcEEEEecCccccCCCCCCCcccccccccHHHHHHhhcCCceeeccCCCceeeeeeHH
Q 010075 232 VFTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVD 306 (519)
Q Consensus 232 ~~sK~~aE~lv~~~-----~~~lp~~IvRPs~V~g~~~~p~~gw~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~d~vpVD 306 (519)
+.||+..+.+++.. ..++.+..++||.|-.+...... . ... ........ .....+...+
T Consensus 158 ~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~---~----~~~-~~~~~~~~--------~~~~~~~~~~ 221 (254)
T PRK07478 158 AASKAGLIGLTQVLAAEYGAQGIRVNALLPGGTDTPMGRAMG---D----TPE-ALAFVAGL--------HALKRMAQPE 221 (254)
T ss_pred HHHHHHHHHHHHHHHHHHhhcCEEEEEEeeCcccCccccccc---C----CHH-HHHHHHhc--------CCCCCCcCHH
Confidence 99999999888765 34799999999998665321110 0 000 00111100 0112346789
Q ss_pred HHHHHHHHHHHHhccCCCCCcEEEecCC
Q 010075 307 MVVNAMIVAMVAHAKQPSDANIYHVGSS 334 (519)
Q Consensus 307 dva~aii~a~~~~~~~~~~~~iyni~s~ 334 (519)
+++++++.++..... .-.+.++.+.+|
T Consensus 222 ~va~~~~~l~s~~~~-~~~G~~~~~dgg 248 (254)
T PRK07478 222 EIAQAALFLASDAAS-FVTGTALLVDGG 248 (254)
T ss_pred HHHHHHHHHcCchhc-CCCCCeEEeCCc
Confidence 999999988753322 123566666554
|
|
| >PRK06124 gluconate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.59 E-value=9.3e-14 Score=136.63 Aligned_cols=221 Identities=14% Similarity=0.077 Sum_probs=144.4
Q ss_pred cCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 010075 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (519)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (519)
++||+|+||||+|+||+.+++.|++.| .+|+++.|+... .+.+.+ .+++ . ..++.+
T Consensus 9 ~~~k~ilItGas~~IG~~la~~l~~~G---~~v~~~~r~~~~---~~~~~~---------~~~~-~--------~~~~~~ 64 (256)
T PRK06124 9 LAGQVALVTGSARGLGFEIARALAGAG---AHVLVNGRNAAT---LEAAVA---------ALRA-A--------GGAAEA 64 (256)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHcC---CeEEEEeCCHHH---HHHHHH---------HHHh-c--------CCceEE
Confidence 679999999999999999999999988 578999886421 111111 1111 1 246889
Q ss_pred EeccCCCCCCCCChhhhHHHHh-------cCccEEEEcCccCCc-------cccHHHHHHHhHHHHHHHHHHHHh-c--c
Q 010075 90 VPGDISSEDLGLKDSNLKEELW-------NELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKK-C--V 152 (519)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~-------~~vdiViH~Aa~v~f-------~~~~~~~~~~Nv~gt~~ll~~a~~-~--~ 152 (519)
+.+|++++. + ...++ .++|+|||+|+.... .+.++..+++|+.|+..+.+.+.+ + .
T Consensus 65 ~~~Dl~~~~------~-~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~ 137 (256)
T PRK06124 65 LAFDIADEE------A-VAAAFARIDAEHGRLDILVNNVGARDRRPLAELDDAAIRALLETDLVAPILLSRLAAQRMKRQ 137 (256)
T ss_pred EEccCCCHH------H-HHHHHHHHHHhcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc
Confidence 999999632 2 22222 357999999997532 245677899999999999876643 1 2
Q ss_pred CCceEEEEecceeecCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcHHH
Q 010075 153 KLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYV 232 (519)
Q Consensus 153 ~l~~~V~vSTa~v~~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~Y~ 232 (519)
+..++|++||....... .....|+
T Consensus 138 ~~~~iv~~ss~~~~~~~--------------------------------------------------------~~~~~Y~ 161 (256)
T PRK06124 138 GYGRIIAITSIAGQVAR--------------------------------------------------------AGDAVYP 161 (256)
T ss_pred CCcEEEEEeechhccCC--------------------------------------------------------CCccHhH
Confidence 56789999997543211 1235799
Q ss_pred HHHHHHHHHHHHh-----hcCCcEEEEecCccccCCCCCCCcccccccccHHHHHHhhcCCceeeccCCCceeeeeeHHH
Q 010075 233 FTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDM 307 (519)
Q Consensus 233 ~sK~~aE~lv~~~-----~~~lp~~IvRPs~V~g~~~~p~~gw~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~d~vpVDd 307 (519)
.+|+..+.+++.. ..++.+..++|+.|.++...+ +.. ...+....... .....++++++
T Consensus 162 ~sK~a~~~~~~~la~e~~~~~i~v~~i~pg~v~t~~~~~---~~~----~~~~~~~~~~~---------~~~~~~~~~~~ 225 (256)
T PRK06124 162 AAKQGLTGLMRALAAEFGPHGITSNAIAPGYFATETNAA---MAA----DPAVGPWLAQR---------TPLGRWGRPEE 225 (256)
T ss_pred HHHHHHHHHHHHHHHHHHHhCcEEEEEEECCccCcchhh---hcc----ChHHHHHHHhc---------CCCCCCCCHHH
Confidence 9999998887754 347999999999998875321 100 01111111111 01123688999
Q ss_pred HHHHHHHHHHHhccCCCCCcEEEecCC
Q 010075 308 VVNAMIVAMVAHAKQPSDANIYHVGSS 334 (519)
Q Consensus 308 va~aii~a~~~~~~~~~~~~iyni~s~ 334 (519)
++.+++.++.... ..-.+..+.+.+|
T Consensus 226 ~a~~~~~l~~~~~-~~~~G~~i~~dgg 251 (256)
T PRK06124 226 IAGAAVFLASPAA-SYVNGHVLAVDGG 251 (256)
T ss_pred HHHHHHHHcCccc-CCcCCCEEEECCC
Confidence 9999999886432 2223556666544
|
|
| >PRK08217 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.58 E-value=2.1e-13 Score=133.47 Aligned_cols=220 Identities=13% Similarity=0.129 Sum_probs=142.2
Q ss_pred cCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 010075 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (519)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (519)
+++++++||||+|+||..+++.|++.| .+|+++.|+.... +...++ ++. ...++.+
T Consensus 3 ~~~~~~lItG~~g~iG~~~a~~l~~~G---~~vi~~~r~~~~~---~~~~~~---------~~~---------~~~~~~~ 58 (253)
T PRK08217 3 LKDKVIVITGGAQGLGRAMAEYLAQKG---AKLALIDLNQEKL---EEAVAE---------CGA---------LGTEVRG 58 (253)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCC---CEEEEEeCCHHHH---HHHHHH---------HHh---------cCCceEE
Confidence 468999999999999999999999988 5788888764221 111111 111 0246788
Q ss_pred EeccCCCCCCCCChhhhHHHH---hcCccEEEEcCccCCc----------------cccHHHHHHHhHHHHHHHHHHHHh
Q 010075 90 VPGDISSEDLGLKDSNLKEEL---WNELDIMVNSAAITKF----------------DERYDVAFGINTLGVIHLVNFAKK 150 (519)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l---~~~vdiViH~Aa~v~f----------------~~~~~~~~~~Nv~gt~~ll~~a~~ 150 (519)
+.+|++++.. ..+..+.+ ...+|+|||+||.... .+.+...+++|+.|+..+.+.+..
T Consensus 59 ~~~D~~~~~~---~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~ 135 (253)
T PRK08217 59 YAANVTDEED---VEATFAQIAEDFGQLNGLINNAGILRDGLLVKAKDGKVTSKMSLEQFQSVIDVNLTGVFLCGREAAA 135 (253)
T ss_pred EEcCCCCHHH---HHHHHHHHHHHcCCCCEEEECCCccCcCcccccccccccccCCHHHHHHHHhhhhHHHHHHHHHHHH
Confidence 9999996321 11111111 1358999999986321 134566788999999877665432
Q ss_pred ----ccCCceEEEEecceeecCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCC
Q 010075 151 ----CVKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHG 226 (519)
Q Consensus 151 ----~~~l~~~V~vSTa~v~~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~ 226 (519)
...-..++++||...++. .
T Consensus 136 ~l~~~~~~~~iv~~ss~~~~~~---------------------------------------------------------~ 158 (253)
T PRK08217 136 KMIESGSKGVIINISSIARAGN---------------------------------------------------------M 158 (253)
T ss_pred HHHhcCCCeEEEEEccccccCC---------------------------------------------------------C
Confidence 112356899998755432 1
Q ss_pred CCcHHHHHHHHHHHHHHHh-----hcCCcEEEEecCccccCCCCCCCcccccccccHHHHHHhhcCCceeeccCCCceee
Q 010075 227 WPNTYVFTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMD 301 (519)
Q Consensus 227 ~~n~Y~~sK~~aE~lv~~~-----~~~lp~~IvRPs~V~g~~~~p~~gw~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~d 301 (519)
....|+.+|+..|.+++.+ ..+++++.++|+.|.++..... ..........+. ....
T Consensus 159 ~~~~Y~~sK~a~~~l~~~la~~~~~~~i~v~~v~pg~v~t~~~~~~---------~~~~~~~~~~~~---------~~~~ 220 (253)
T PRK08217 159 GQTNYSASKAGVAAMTVTWAKELARYGIRVAAIAPGVIETEMTAAM---------KPEALERLEKMI---------PVGR 220 (253)
T ss_pred CCchhHHHHHHHHHHHHHHHHHHHHcCcEEEEEeeCCCcCcccccc---------CHHHHHHHHhcC---------CcCC
Confidence 2356999999999988765 3579999999999987654221 111111111111 1223
Q ss_pred eeeHHHHHHHHHHHHHHhccCCCCCcEEEecCC
Q 010075 302 VIPVDMVVNAMIVAMVAHAKQPSDANIYHVGSS 334 (519)
Q Consensus 302 ~vpVDdva~aii~a~~~~~~~~~~~~iyni~s~ 334 (519)
+.+++|+|+++..++... .-.+++|+++++
T Consensus 221 ~~~~~~~a~~~~~l~~~~---~~~g~~~~~~gg 250 (253)
T PRK08217 221 LGEPEEIAHTVRFIIEND---YVTGRVLEIDGG 250 (253)
T ss_pred CcCHHHHHHHHHHHHcCC---CcCCcEEEeCCC
Confidence 568899999999988532 123689999876
|
|
| >PRK07453 protochlorophyllide oxidoreductase; Validated | Back alignment and domain information |
|---|
Probab=99.58 E-value=4.6e-14 Score=143.99 Aligned_cols=201 Identities=16% Similarity=0.162 Sum_probs=119.9
Q ss_pred cCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 010075 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (519)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (519)
..+|+|+||||||+||.++++.|++.| .+|+++.|+... .+.+.+++ .. ...++.+
T Consensus 4 ~~~k~vlVTGas~gIG~~~a~~L~~~G---~~V~~~~r~~~~---~~~~~~~l---------~~---------~~~~~~~ 59 (322)
T PRK07453 4 DAKGTVIITGASSGVGLYAAKALAKRG---WHVIMACRNLKK---AEAAAQEL---------GI---------PPDSYTI 59 (322)
T ss_pred CCCCEEEEEcCCChHHHHHHHHHHHCC---CEEEEEECCHHH---HHHHHHHh---------hc---------cCCceEE
Confidence 358999999999999999999999988 678888886421 11111111 00 0246889
Q ss_pred EeccCCCCCCCCChhhhHHHHh-------cCccEEEEcCccCCc--------cccHHHHHHHhHHHHHHHHHHHHhc---
Q 010075 90 VPGDISSEDLGLKDSNLKEELW-------NELDIMVNSAAITKF--------DERYDVAFGINTLGVIHLVNFAKKC--- 151 (519)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~-------~~vdiViH~Aa~v~f--------~~~~~~~~~~Nv~gt~~ll~~a~~~--- 151 (519)
+.+|++++ +..+.+. .++|+|||+||.... .+.++..+++|+.|+..+++++...
T Consensus 60 ~~~Dl~~~-------~~v~~~~~~~~~~~~~iD~li~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~ 132 (322)
T PRK07453 60 IHIDLGDL-------DSVRRFVDDFRALGKPLDALVCNAAVYMPLLKEPLRSPQGYELSMATNHLGHFLLCNLLLEDLKK 132 (322)
T ss_pred EEecCCCH-------HHHHHHHHHHHHhCCCccEEEECCcccCCCCCCCCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHh
Confidence 99999963 2222322 259999999996421 1456788999999999998877542
Q ss_pred cC--CceEEEEecceeecCcC-CeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCC
Q 010075 152 VK--LKVFVHVSTAYVAGERT-GLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWP 228 (519)
Q Consensus 152 ~~--l~~~V~vSTa~v~~~~~-~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~ 228 (519)
.+ ..++|++||...+.... +.. +.+ .+.+.+...... .... ............+.
T Consensus 133 ~~~~~~riV~vsS~~~~~~~~~~~~---~~~--~~~~~~~~~~~~---------~~~~--------~~~~~~~~~~~~~~ 190 (322)
T PRK07453 133 SPAPDPRLVILGTVTANPKELGGKI---PIP--APADLGDLSGFE---------AGFK--------APISMADGKKFKPG 190 (322)
T ss_pred CCCCCceEEEEcccccCccccCCcc---CCC--Cccchhhhhcch---------hccc--------ccccccCccCCCcc
Confidence 11 25899999976653211 110 000 000000000000 0000 00000000112345
Q ss_pred cHHHHHHHHHHHHHHHh------hcCCcEEEEecCccccCC
Q 010075 229 NTYVFTKTMGEMLMQQS------KENLSLVIIRPTVVSGTY 263 (519)
Q Consensus 229 n~Y~~sK~~aE~lv~~~------~~~lp~~IvRPs~V~g~~ 263 (519)
..|+.||...+.+.+++ ..++.++.+|||.|+++.
T Consensus 191 ~~Y~~SK~a~~~~~~~la~~~~~~~gi~v~~v~PG~v~~t~ 231 (322)
T PRK07453 191 KAYKDSKLCNMLTMRELHRRYHESTGITFSSLYPGCVADTP 231 (322)
T ss_pred chhhHhHHHHHHHHHHHHHhhcccCCeEEEEecCCcccCCc
Confidence 78999999877666544 137999999999997653
|
|
| >PRK06550 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.58 E-value=7.8e-14 Score=135.29 Aligned_cols=213 Identities=16% Similarity=0.160 Sum_probs=142.8
Q ss_pred cCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 010075 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (519)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (519)
+++|+++||||+|+||+++++.|++.| .+|+++.|+.... ...++.+
T Consensus 3 l~~k~~lVtGas~~iG~~ia~~l~~~G---~~v~~~~r~~~~~------------------------------~~~~~~~ 49 (235)
T PRK06550 3 FMTKTVLITGAASGIGLAQARAFLAQG---AQVYGVDKQDKPD------------------------------LSGNFHF 49 (235)
T ss_pred CCCCEEEEcCCCchHHHHHHHHHHHCC---CEEEEEeCCcccc------------------------------cCCcEEE
Confidence 568999999999999999999999988 5778888764221 0246788
Q ss_pred EeccCCCCCCCCChhhhHHHHhcCccEEEEcCccCC----c----cccHHHHHHHhHHHHHHHHHHHHhc---cCCceEE
Q 010075 90 VPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITK----F----DERYDVAFGINTLGVIHLVNFAKKC---VKLKVFV 158 (519)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~~~vdiViH~Aa~v~----f----~~~~~~~~~~Nv~gt~~ll~~a~~~---~~l~~~V 158 (519)
+.+|++++ .+........+|+|||+|+... + .+.++..+++|+.|+.++++.+... .+..++|
T Consensus 50 ~~~D~~~~------~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv 123 (235)
T PRK06550 50 LQLDLSDD------LEPLFDWVPSVDILCNTAGILDDYKPLLDTSLEEWQHIFDTNLTSTFLLTRAYLPQMLERKSGIII 123 (235)
T ss_pred EECChHHH------HHHHHHhhCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEE
Confidence 99999853 1222234467999999999532 1 2456778999999999999887542 2346899
Q ss_pred EEecceeecCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcHHHHHHHHH
Q 010075 159 HVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMG 238 (519)
Q Consensus 159 ~vSTa~v~~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~Y~~sK~~a 238 (519)
++||....... .....|+.+|+..
T Consensus 124 ~~sS~~~~~~~--------------------------------------------------------~~~~~Y~~sK~a~ 147 (235)
T PRK06550 124 NMCSIASFVAG--------------------------------------------------------GGGAAYTASKHAL 147 (235)
T ss_pred EEcChhhccCC--------------------------------------------------------CCCcccHHHHHHH
Confidence 99997654211 1234699999988
Q ss_pred HHHHHHh-----hcCCcEEEEecCccccCCCCCCCcccccccccHHHHHHhhcCCceeeccCCCceeeeeeHHHHHHHHH
Q 010075 239 EMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMI 313 (519)
Q Consensus 239 E~lv~~~-----~~~lp~~IvRPs~V~g~~~~p~~gw~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~d~vpVDdva~aii 313 (519)
+.+.+.. ..++++++++|+.|.++.... .+.+ .......... .....+...+|+|++++
T Consensus 148 ~~~~~~la~~~~~~gi~v~~v~pg~v~t~~~~~--~~~~-----~~~~~~~~~~---------~~~~~~~~~~~~a~~~~ 211 (235)
T PRK06550 148 AGFTKQLALDYAKDGIQVFGIAPGAVKTPMTAA--DFEP-----GGLADWVARE---------TPIKRWAEPEEVAELTL 211 (235)
T ss_pred HHHHHHHHHHhhhcCeEEEEEeeCCccCccccc--ccCc-----hHHHHHHhcc---------CCcCCCCCHHHHHHHHH
Confidence 8777654 347999999999997765321 1111 1111111111 11223567899999999
Q ss_pred HHHHHhccCCCCCcEEEecCC
Q 010075 314 VAMVAHAKQPSDANIYHVGSS 334 (519)
Q Consensus 314 ~a~~~~~~~~~~~~iyni~s~ 334 (519)
.++...... ..+.++.+.+|
T Consensus 212 ~l~s~~~~~-~~g~~~~~~gg 231 (235)
T PRK06550 212 FLASGKADY-MQGTIVPIDGG 231 (235)
T ss_pred HHcChhhcc-CCCcEEEECCc
Confidence 988543322 23567777665
|
|
| >PRK06139 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.58 E-value=2.5e-13 Score=138.94 Aligned_cols=201 Identities=13% Similarity=0.161 Sum_probs=132.4
Q ss_pred cCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 010075 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (519)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (519)
+++|+|+||||||+||++++++|++.| .+|+++.|+... .+.+.++ +++ . ..++.+
T Consensus 5 l~~k~vlITGAs~GIG~aia~~la~~G---~~Vvl~~R~~~~---l~~~~~~---------~~~-~--------g~~~~~ 60 (330)
T PRK06139 5 LHGAVVVITGASSGIGQATAEAFARRG---ARLVLAARDEEA---LQAVAEE---------CRA-L--------GAEVLV 60 (330)
T ss_pred CCCCEEEEcCCCCHHHHHHHHHHHHCC---CEEEEEECCHHH---HHHHHHH---------HHh-c--------CCcEEE
Confidence 468999999999999999999999998 578888886422 2222211 111 1 246778
Q ss_pred EeccCCCCCCCCChhhhHHHHh-------cCccEEEEcCccCCc-------cccHHHHHHHhHHHHHHHHHHHHh-c--c
Q 010075 90 VPGDISSEDLGLKDSNLKEELW-------NELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKK-C--V 152 (519)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~-------~~vdiViH~Aa~v~f-------~~~~~~~~~~Nv~gt~~ll~~a~~-~--~ 152 (519)
+.+|++++ +..+.+. ..+|++||+|+...+ .+.++..+++|+.|+.++.+.+.. + .
T Consensus 61 ~~~Dv~d~-------~~v~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~e~~~~~~~vN~~g~~~~~~~~lp~~~~~ 133 (330)
T PRK06139 61 VPTDVTDA-------DQVKALATQAASFGGRIDVWVNNVGVGAVGRFEETPIEAHEQVIQTNLIGYMRDAHAALPIFKKQ 133 (330)
T ss_pred EEeeCCCH-------HHHHHHHHHHHHhcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHHc
Confidence 89999963 2223333 469999999997532 145667899999999988777642 1 2
Q ss_pred CCceEEEEecceeecCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcHHH
Q 010075 153 KLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYV 232 (519)
Q Consensus 153 ~l~~~V~vSTa~v~~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~Y~ 232 (519)
+...+|++||...+... +....|+
T Consensus 134 ~~g~iV~isS~~~~~~~--------------------------------------------------------p~~~~Y~ 157 (330)
T PRK06139 134 GHGIFINMISLGGFAAQ--------------------------------------------------------PYAAAYS 157 (330)
T ss_pred CCCEEEEEcChhhcCCC--------------------------------------------------------CCchhHH
Confidence 34689999987543211 1235799
Q ss_pred HHHHHHHHHHH----Hhh--cCCcEEEEecCccccCCCCCCCcccccccccHHHHHHhhcCCceeeccCCCceeeeeeHH
Q 010075 233 FTKTMGEMLMQ----QSK--ENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVD 306 (519)
Q Consensus 233 ~sK~~aE~lv~----~~~--~~lp~~IvRPs~V~g~~~~p~~gw~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~d~vpVD 306 (519)
.||+..+.+.+ +.. .++.++.+.|+.|.++..+. ..+. .+. .......++..+
T Consensus 158 asKaal~~~~~sL~~El~~~~gI~V~~v~Pg~v~T~~~~~----~~~~-----------~~~------~~~~~~~~~~pe 216 (330)
T PRK06139 158 ASKFGLRGFSEALRGELADHPDIHVCDVYPAFMDTPGFRH----GANY-----------TGR------RLTPPPPVYDPR 216 (330)
T ss_pred HHHHHHHHHHHHHHHHhCCCCCeEEEEEecCCccCccccc----cccc-----------ccc------cccCCCCCCCHH
Confidence 99996555444 442 37999999999987764321 0110 000 001112357899
Q ss_pred HHHHHHHHHHHH
Q 010075 307 MVVNAMIVAMVA 318 (519)
Q Consensus 307 dva~aii~a~~~ 318 (519)
++|++++.++.+
T Consensus 217 ~vA~~il~~~~~ 228 (330)
T PRK06139 217 RVAKAVVRLADR 228 (330)
T ss_pred HHHHHHHHHHhC
Confidence 999999998863
|
|
| >PRK12743 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=99.58 E-value=1e-13 Score=136.48 Aligned_cols=225 Identities=10% Similarity=0.052 Sum_probs=140.6
Q ss_pred CCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEEe
Q 010075 12 NKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVP 91 (519)
Q Consensus 12 ~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v~ 91 (519)
+|+|+||||||+||++++++|++.| .+|+++.|+.... .+++.+++ +. ...++..+.
T Consensus 2 ~k~vlItGas~giG~~~a~~l~~~G---~~V~~~~~~~~~~--~~~~~~~~---------~~---------~~~~~~~~~ 58 (256)
T PRK12743 2 AQVAIVTASDSGIGKACALLLAQQG---FDIGITWHSDEEG--AKETAEEV---------RS---------HGVRAEIRQ 58 (256)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCC---CEEEEEeCCChHH--HHHHHHHH---------Hh---------cCCceEEEE
Confidence 6899999999999999999999998 5777776643221 22222111 11 125688999
Q ss_pred ccCCCCCCCCChhhhHHHHhcCccEEEEcCccCCc-------cccHHHHHHHhHHHHHHHHHHHHhc----cCCceEEEE
Q 010075 92 GDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKC----VKLKVFVHV 160 (519)
Q Consensus 92 gDl~~~~lgls~~~~~~~l~~~vdiViH~Aa~v~f-------~~~~~~~~~~Nv~gt~~ll~~a~~~----~~l~~~V~v 160 (519)
+|++++.---...+........+|+|||+|+.... .+.++..+.+|+.|+..+++.+... ++-.++|++
T Consensus 59 ~Dl~~~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~g~ii~i 138 (256)
T PRK12743 59 LDLSDLPEGAQALDKLIQRLGRIDVLVNNAGAMTKAPFLDMDFDEWRKIFTVDVDGAFLCSQIAARHMVKQGQGGRIINI 138 (256)
T ss_pred ccCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCeEEEEE
Confidence 99996421000000111122468999999997542 2456788999999999999887642 123589999
Q ss_pred ecceeecCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcHHHHHHHHHHH
Q 010075 161 STAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEM 240 (519)
Q Consensus 161 STa~v~~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~Y~~sK~~aE~ 240 (519)
||....... .....|+.+|+..+.
T Consensus 139 sS~~~~~~~--------------------------------------------------------~~~~~Y~~sK~a~~~ 162 (256)
T PRK12743 139 TSVHEHTPL--------------------------------------------------------PGASAYTAAKHALGG 162 (256)
T ss_pred eeccccCCC--------------------------------------------------------CCcchhHHHHHHHHH
Confidence 986422100 223579999999998
Q ss_pred HHHHh-----hcCCcEEEEecCccccCCCCCCCcccccccccHHHHHHhhcCCceeeccCCCceeeeeeHHHHHHHHHHH
Q 010075 241 LMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMIVA 315 (519)
Q Consensus 241 lv~~~-----~~~lp~~IvRPs~V~g~~~~p~~gw~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~d~vpVDdva~aii~a 315 (519)
+++.. ..++++..++||.+.++.....++ ........+ .+ .....+.+|+++++..+
T Consensus 163 l~~~la~~~~~~~i~v~~v~Pg~~~t~~~~~~~~---------~~~~~~~~~----~~-----~~~~~~~~dva~~~~~l 224 (256)
T PRK12743 163 LTKAMALELVEHGILVNAVAPGAIATPMNGMDDS---------DVKPDSRPG----IP-----LGRPGDTHEIASLVAWL 224 (256)
T ss_pred HHHHHHHHhhhhCeEEEEEEeCCccCccccccCh---------HHHHHHHhc----CC-----CCCCCCHHHHHHHHHHH
Confidence 88764 347999999999998764321110 001111111 01 11234779999999888
Q ss_pred HHHhccCCCCCcEEEecCC
Q 010075 316 MVAHAKQPSDANIYHVGSS 334 (519)
Q Consensus 316 ~~~~~~~~~~~~iyni~s~ 334 (519)
+.... ..-.+.++.+.+|
T Consensus 225 ~~~~~-~~~~G~~~~~dgg 242 (256)
T PRK12743 225 CSEGA-SYTTGQSLIVDGG 242 (256)
T ss_pred hCccc-cCcCCcEEEECCC
Confidence 75322 2223677777766
|
|
| >PRK07102 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.58 E-value=1.2e-13 Score=134.84 Aligned_cols=196 Identities=18% Similarity=0.151 Sum_probs=131.4
Q ss_pred CCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEEe
Q 010075 12 NKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVP 91 (519)
Q Consensus 12 ~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v~ 91 (519)
+|+|+||||||+||.++++.|++.| .+|+++.|+.... +.+.+ .++.. ...++.++.
T Consensus 1 ~~~vlItGas~giG~~~a~~l~~~G---~~Vi~~~r~~~~~---~~~~~---------~~~~~--------~~~~~~~~~ 57 (243)
T PRK07102 1 MKKILIIGATSDIARACARRYAAAG---ARLYLAARDVERL---ERLAD---------DLRAR--------GAVAVSTHE 57 (243)
T ss_pred CcEEEEEcCCcHHHHHHHHHHHhcC---CEEEEEeCCHHHH---HHHHH---------HHHHh--------cCCeEEEEe
Confidence 3689999999999999999999998 5789999875321 11111 11111 125788999
Q ss_pred ccCCCCCCCCChhhhHHHHhcCccEEEEcCccCCcc-------ccHHHHHHHhHHHHHHHHHHHHhc---cCCceEEEEe
Q 010075 92 GDISSEDLGLKDSNLKEELWNELDIMVNSAAITKFD-------ERYDVAFGINTLGVIHLVNFAKKC---VKLKVFVHVS 161 (519)
Q Consensus 92 gDl~~~~lgls~~~~~~~l~~~vdiViH~Aa~v~f~-------~~~~~~~~~Nv~gt~~ll~~a~~~---~~l~~~V~vS 161 (519)
+|++++.- -.+..+.+.+++|+|||+|+..... +.+...+++|+.|+.++++.+... .+..++|++|
T Consensus 58 ~Dl~~~~~---~~~~~~~~~~~~d~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~s 134 (243)
T PRK07102 58 LDILDTAS---HAAFLDSLPALPDIVLIAVGTLGDQAACEADPALALREFRTNFEGPIALLTLLANRFEARGSGTIVGIS 134 (243)
T ss_pred cCCCChHH---HHHHHHHHhhcCCEEEECCcCCCCcccccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCCEEEEEe
Confidence 99996421 1111112233579999999875321 334567899999999999887542 2467899999
Q ss_pred cceeecCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcHHHHHHHHHHHH
Q 010075 162 TAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEML 241 (519)
Q Consensus 162 Ta~v~~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~Y~~sK~~aE~l 241 (519)
|....... .....|+.+|+..+.+
T Consensus 135 S~~~~~~~--------------------------------------------------------~~~~~Y~~sK~a~~~~ 158 (243)
T PRK07102 135 SVAGDRGR--------------------------------------------------------ASNYVYGSAKAALTAF 158 (243)
T ss_pred cccccCCC--------------------------------------------------------CCCcccHHHHHHHHHH
Confidence 87432110 1123599999998888
Q ss_pred HHHh-----hcCCcEEEEecCccccCCCCCCCcccccccccHHHHHHhhcCCceeeccCCCceeeeeeHHHHHHHHHHHH
Q 010075 242 MQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMIVAM 316 (519)
Q Consensus 242 v~~~-----~~~lp~~IvRPs~V~g~~~~p~~gw~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~d~vpVDdva~aii~a~ 316 (519)
.+.. ..++++.+++|+.|.++..... . .+. .-.+.+++++++++.++
T Consensus 159 ~~~l~~el~~~gi~v~~v~pg~v~t~~~~~~-------~----------------~~~-----~~~~~~~~~a~~i~~~~ 210 (243)
T PRK07102 159 LSGLRNRLFKSGVHVLTVKPGFVRTPMTAGL-------K----------------LPG-----PLTAQPEEVAKDIFRAI 210 (243)
T ss_pred HHHHHHHhhccCcEEEEEecCcccChhhhcc-------C----------------CCc-----cccCCHHHHHHHHHHHH
Confidence 8754 4579999999999987632110 0 000 11367899999999887
Q ss_pred H
Q 010075 317 V 317 (519)
Q Consensus 317 ~ 317 (519)
.
T Consensus 211 ~ 211 (243)
T PRK07102 211 E 211 (243)
T ss_pred h
Confidence 6
|
|
| >PRK08265 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.58 E-value=1.2e-13 Score=136.67 Aligned_cols=220 Identities=15% Similarity=0.113 Sum_probs=141.4
Q ss_pred cCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 010075 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (519)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (519)
+++|+++||||||+||++++++|++.| .+|+++.|+... .+++. ++. ..++.+
T Consensus 4 ~~~k~vlItGas~gIG~~ia~~l~~~G---~~V~~~~r~~~~---~~~~~-------------~~~--------~~~~~~ 56 (261)
T PRK08265 4 LAGKVAIVTGGATLIGAAVARALVAAG---ARVAIVDIDADN---GAAVA-------------ASL--------GERARF 56 (261)
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHCC---CEEEEEeCCHHH---HHHHH-------------HHh--------CCeeEE
Confidence 468999999999999999999999998 578888886421 12221 111 246889
Q ss_pred EeccCCCCCCCCChhhhHHHHh-------cCccEEEEcCccCCc------cccHHHHHHHhHHHHHHHHHHHHh-c-cCC
Q 010075 90 VPGDISSEDLGLKDSNLKEELW-------NELDIMVNSAAITKF------DERYDVAFGINTLGVIHLVNFAKK-C-VKL 154 (519)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~-------~~vdiViH~Aa~v~f------~~~~~~~~~~Nv~gt~~ll~~a~~-~-~~l 154 (519)
+.+|++++ +..+.++ ..+|++||+|+.... .+.++..+++|+.|+..+++.+.. + ++-
T Consensus 57 ~~~Dl~~~-------~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~ 129 (261)
T PRK08265 57 IATDITDD-------AAIERAVATVVARFGRVDILVNLACTYLDDGLASSRADWLAALDVNLVSAAMLAQAAHPHLARGG 129 (261)
T ss_pred EEecCCCH-------HHHHHHHHHHHHHhCCCCEEEECCCCCCCCcCcCCHHHHHHHHhHhhHHHHHHHHHHHHHHhcCC
Confidence 99999963 2222322 368999999996421 246778899999999999887654 2 234
Q ss_pred ceEEEEecceeecCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcHHHHH
Q 010075 155 KVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFT 234 (519)
Q Consensus 155 ~~~V~vSTa~v~~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~Y~~s 234 (519)
.++|++||....... .....|+.+
T Consensus 130 g~ii~isS~~~~~~~--------------------------------------------------------~~~~~Y~as 153 (261)
T PRK08265 130 GAIVNFTSISAKFAQ--------------------------------------------------------TGRWLYPAS 153 (261)
T ss_pred cEEEEECchhhccCC--------------------------------------------------------CCCchhHHH
Confidence 689999986543211 112469999
Q ss_pred HHHHHHHHHHh-----hcCCcEEEEecCccccCCCCCCCcccccccccHHHHHHhhcCCceeeccCCCceeeeeeHHHHH
Q 010075 235 KTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVV 309 (519)
Q Consensus 235 K~~aE~lv~~~-----~~~lp~~IvRPs~V~g~~~~p~~gw~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~d~vpVDdva 309 (519)
|+..+.+++.. ..++++..++||.+..+....... ............ ......+...+|+|
T Consensus 154 Kaa~~~~~~~la~e~~~~gi~vn~v~PG~~~t~~~~~~~~------~~~~~~~~~~~~--------~~p~~r~~~p~dva 219 (261)
T PRK08265 154 KAAIRQLTRSMAMDLAPDGIRVNSVSPGWTWSRVMDELSG------GDRAKADRVAAP--------FHLLGRVGDPEEVA 219 (261)
T ss_pred HHHHHHHHHHHHHHhcccCEEEEEEccCCccChhhhhhcc------cchhHHHHhhcc--------cCCCCCccCHHHHH
Confidence 99998888754 347999999999876653211100 000000000000 00111245689999
Q ss_pred HHHHHHHHHhccCCCCCcEEEecCC
Q 010075 310 NAMIVAMVAHAKQPSDANIYHVGSS 334 (519)
Q Consensus 310 ~aii~a~~~~~~~~~~~~iyni~s~ 334 (519)
+++..++.... ..-.+.++.+.+|
T Consensus 220 ~~~~~l~s~~~-~~~tG~~i~vdgg 243 (261)
T PRK08265 220 QVVAFLCSDAA-SFVTGADYAVDGG 243 (261)
T ss_pred HHHHHHcCccc-cCccCcEEEECCC
Confidence 99998885322 2223567777665
|
|
| >PRK06198 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.58 E-value=7.4e-14 Score=137.59 Aligned_cols=228 Identities=17% Similarity=0.190 Sum_probs=147.3
Q ss_pred cCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 010075 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (519)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (519)
+++|+|+||||||+||+.+++.|++.|. ..|+++.|+.... +.+. +.+++ ...++.+
T Consensus 4 ~~~k~vlItGa~g~iG~~la~~l~~~G~--~~V~~~~r~~~~~---~~~~---------~~l~~---------~~~~~~~ 60 (260)
T PRK06198 4 LDGKVALVTGGTQGLGAAIARAFAERGA--AGLVICGRNAEKG---EAQA---------AELEA---------LGAKAVF 60 (260)
T ss_pred CCCcEEEEeCCCchHHHHHHHHHHHCCC--CeEEEEcCCHHHH---HHHH---------HHHHh---------cCCeEEE
Confidence 6789999999999999999999999883 2388888864221 1111 11111 1246788
Q ss_pred EeccCCCCCCCCChhhhHHHHh-------cCccEEEEcCccCCc-------cccHHHHHHHhHHHHHHHHHHHHhc----
Q 010075 90 VPGDISSEDLGLKDSNLKEELW-------NELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKC---- 151 (519)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~-------~~vdiViH~Aa~v~f-------~~~~~~~~~~Nv~gt~~ll~~a~~~---- 151 (519)
+.+|+++++ ....++ .++|+|||+|+.... .+.++..+.+|+.|+.++++.+.+.
T Consensus 61 ~~~D~~~~~-------~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~ 133 (260)
T PRK06198 61 VQADLSDVE-------DCRRVVAAADEAFGRLDALVNAAGLTDRGTILDTSPELFDRHFAVNVRAPFFLMQEAIKLMRRR 133 (260)
T ss_pred EEccCCCHH-------HHHHHHHHHHHHhCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc
Confidence 999999632 222322 368999999997531 2345677999999999998887542
Q ss_pred cCCceEEEEecceeecCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcHH
Q 010075 152 VKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTY 231 (519)
Q Consensus 152 ~~l~~~V~vSTa~v~~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~Y 231 (519)
....++|++||...++.. ...+.|
T Consensus 134 ~~~g~iv~~ss~~~~~~~--------------------------------------------------------~~~~~Y 157 (260)
T PRK06198 134 KAEGTIVNIGSMSAHGGQ--------------------------------------------------------PFLAAY 157 (260)
T ss_pred CCCCEEEEECCcccccCC--------------------------------------------------------CCcchh
Confidence 113579999998665421 123579
Q ss_pred HHHHHHHHHHHHHh-----hcCCcEEEEecCccccCCCCCCCcccccc-cccHHHHHHhhcCCceeeccCCCceeeeeeH
Q 010075 232 VFTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDL-KTINTLFVASAQGNLRCLVGETKVIMDVIPV 305 (519)
Q Consensus 232 ~~sK~~aE~lv~~~-----~~~lp~~IvRPs~V~g~~~~p~~gw~~~~-~~~~~~i~~~~~g~~~~~~~~~~~~~d~vpV 305 (519)
+.+|...|.+.+.. ..++.++.++|+.+.++...... ..+ .....++.....+ .....++++
T Consensus 158 ~~sK~a~~~~~~~~a~e~~~~~i~v~~i~pg~~~t~~~~~~~---~~~~~~~~~~~~~~~~~---------~~~~~~~~~ 225 (260)
T PRK06198 158 CASKGALATLTRNAAYALLRNRIRVNGLNIGWMATEGEDRIQ---REFHGAPDDWLEKAAAT---------QPFGRLLDP 225 (260)
T ss_pred HHHHHHHHHHHHHHHHHhcccCeEEEEEeeccccCcchhhhh---hhccCCChHHHHHHhcc---------CCccCCcCH
Confidence 99999999988754 34689999999999887531100 000 0111122111111 112346799
Q ss_pred HHHHHHHHHHHHHhccCCCCCcEEEecCCCC
Q 010075 306 DMVVNAMIVAMVAHAKQPSDANIYHVGSSLR 336 (519)
Q Consensus 306 Ddva~aii~a~~~~~~~~~~~~iyni~s~~~ 336 (519)
+++++++..++.... ....++++++.++..
T Consensus 226 ~~~a~~~~~l~~~~~-~~~~G~~~~~~~~~~ 255 (260)
T PRK06198 226 DEVARAVAFLLSDES-GLMTGSVIDFDQSVW 255 (260)
T ss_pred HHHHHHHHHHcChhh-CCccCceEeECCccc
Confidence 999999998875432 222467888877644
|
|
| >PRK06057 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.57 E-value=1.4e-13 Score=135.34 Aligned_cols=218 Identities=12% Similarity=0.111 Sum_probs=136.6
Q ss_pred hcCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceE
Q 010075 9 FLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKIT 88 (519)
Q Consensus 9 ~~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~ 88 (519)
.++|++|+||||||+||+++++.|++.| .+|+++.|+.... +.+. ++ -+..
T Consensus 4 ~~~~~~vlItGasggIG~~~a~~l~~~G---~~v~~~~r~~~~~---~~~~-------------~~----------~~~~ 54 (255)
T PRK06057 4 RLAGRVAVITGGGSGIGLATARRLAAEG---ATVVVGDIDPEAG---KAAA-------------DE----------VGGL 54 (255)
T ss_pred cCCCCEEEEECCCchHHHHHHHHHHHcC---CEEEEEeCCHHHH---HHHH-------------HH----------cCCc
Confidence 3689999999999999999999999988 5788888864321 1111 00 0125
Q ss_pred EEeccCCCCCCCCChhhhHHHHh-------cCccEEEEcCccCCcc---------ccHHHHHHHhHHHHHHHHHHHHh-c
Q 010075 89 FVPGDISSEDLGLKDSNLKEELW-------NELDIMVNSAAITKFD---------ERYDVAFGINTLGVIHLVNFAKK-C 151 (519)
Q Consensus 89 ~v~gDl~~~~lgls~~~~~~~l~-------~~vdiViH~Aa~v~f~---------~~~~~~~~~Nv~gt~~ll~~a~~-~ 151 (519)
++.+|++++ +..+.++ .++|+|||+|+..... +.++..+++|+.|+..+++.+.. +
T Consensus 55 ~~~~D~~~~-------~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l 127 (255)
T PRK06057 55 FVPTDVTDE-------DAVNALFDTAAETYGSVDIAFNNAGISPPEDDSILNTGLDAWQRVQDVNLTSVYLCCKAALPHM 127 (255)
T ss_pred EEEeeCCCH-------HHHHHHHHHHHHHcCCCCEEEECCCcCCCCCCCcccCCHHHHHHHHHHhcHHHHHHHHHHHHHH
Confidence 788999963 2222333 3689999999875321 34678899999999887776542 1
Q ss_pred --cCCceEEEEecce-eecCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCC
Q 010075 152 --VKLKVFVHVSTAY-VAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWP 228 (519)
Q Consensus 152 --~~l~~~V~vSTa~-v~~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~ 228 (519)
.+..++|++||.. +++.. ...
T Consensus 128 ~~~~~g~iv~~sS~~~~~g~~--------------------------------------------------------~~~ 151 (255)
T PRK06057 128 VRQGKGSIINTASFVAVMGSA--------------------------------------------------------TSQ 151 (255)
T ss_pred HHhCCcEEEEEcchhhccCCC--------------------------------------------------------CCC
Confidence 2446889988853 23211 113
Q ss_pred cHHHHHHHHHHHHHH----Hh-hcCCcEEEEecCccccCCCCCCCcccccccccHHHHHHhhcCCceeeccCCCceeeee
Q 010075 229 NTYVFTKTMGEMLMQ----QS-KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVI 303 (519)
Q Consensus 229 n~Y~~sK~~aE~lv~----~~-~~~lp~~IvRPs~V~g~~~~p~~gw~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~d~v 303 (519)
..|+.||+..+.+.+ ++ ..++.++++|||.+.++...+. +.. .+....... ..++ ...+.
T Consensus 152 ~~Y~~sKaal~~~~~~l~~~~~~~gi~v~~i~pg~v~t~~~~~~--~~~---~~~~~~~~~-----~~~~-----~~~~~ 216 (255)
T PRK06057 152 ISYTASKGGVLAMSRELGVQFARQGIRVNALCPGPVNTPLLQEL--FAK---DPERAARRL-----VHVP-----MGRFA 216 (255)
T ss_pred cchHHHHHHHHHHHHHHHHHHHhhCcEEEEEeeCCcCCchhhhh--ccC---CHHHHHHHH-----hcCC-----CCCCc
Confidence 469999976666555 33 4579999999999987643211 100 111110000 0111 12468
Q ss_pred eHHHHHHHHHHHHHHhccCCCCCcEEEecCC
Q 010075 304 PVDMVVNAMIVAMVAHAKQPSDANIYHVGSS 334 (519)
Q Consensus 304 pVDdva~aii~a~~~~~~~~~~~~iyni~s~ 334 (519)
.++++++++..++..... .-.+..+.+.++
T Consensus 217 ~~~~~a~~~~~l~~~~~~-~~~g~~~~~~~g 246 (255)
T PRK06057 217 EPEEIAAAVAFLASDDAS-FITASTFLVDGG 246 (255)
T ss_pred CHHHHHHHHHHHhCcccc-CccCcEEEECCC
Confidence 899999998877753322 222566666554
|
|
| >PRK08277 D-mannonate oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=99.57 E-value=2.2e-13 Score=135.84 Aligned_cols=227 Identities=15% Similarity=0.139 Sum_probs=142.9
Q ss_pred cCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 010075 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (519)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (519)
+++|+++||||+|+||++++++|++.| .+|+++.|+... .+.+.+++ .. ...++.+
T Consensus 8 ~~~k~vlVtGas~giG~~ia~~l~~~G---~~V~~~~r~~~~---~~~~~~~~---------~~---------~~~~~~~ 63 (278)
T PRK08277 8 LKGKVAVITGGGGVLGGAMAKELARAG---AKVAILDRNQEK---AEAVVAEI---------KA---------AGGEALA 63 (278)
T ss_pred cCCCEEEEeCCCchHHHHHHHHHHHCC---CEEEEEeCCHHH---HHHHHHHH---------Hh---------cCCeEEE
Confidence 578999999999999999999999988 578888886421 12221111 11 0246788
Q ss_pred EeccCCCCCCCCChhhhHHHH-------hcCccEEEEcCccCCc----------------------cccHHHHHHHhHHH
Q 010075 90 VPGDISSEDLGLKDSNLKEEL-------WNELDIMVNSAAITKF----------------------DERYDVAFGINTLG 140 (519)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l-------~~~vdiViH~Aa~v~f----------------------~~~~~~~~~~Nv~g 140 (519)
+.+|++++. ....+ ..++|+|||+|+.... .+.++..+++|+.+
T Consensus 64 ~~~Dl~~~~-------~v~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~ 136 (278)
T PRK08277 64 VKADVLDKE-------SLEQARQQILEDFGPCDILINGAGGNHPKATTDNEFHELIEPTKTFFDLDEEGFEFVFDLNLLG 136 (278)
T ss_pred EECCCCCHH-------HHHHHHHHHHHHcCCCCEEEECCCCCCcccccccccccccccccccccCCHHHHHHHHhhhhHH
Confidence 999999632 22222 2479999999995321 24567789999999
Q ss_pred HHHHHHHHHh-c--cCCceEEEEecceeecCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhc
Q 010075 141 VIHLVNFAKK-C--VKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNL 217 (519)
Q Consensus 141 t~~ll~~a~~-~--~~l~~~V~vSTa~v~~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 217 (519)
+..+++.+.+ + .+..++|++||...+...
T Consensus 137 ~~~~~~~~~~~~~~~~~g~ii~isS~~~~~~~------------------------------------------------ 168 (278)
T PRK08277 137 TLLPTQVFAKDMVGRKGGNIINISSMNAFTPL------------------------------------------------ 168 (278)
T ss_pred HHHHHHHHHHHHHhcCCcEEEEEccchhcCCC------------------------------------------------
Confidence 9877665432 1 235689999998654321
Q ss_pred cccccccCCCCcHHHHHHHHHHHHHHHh-----hcCCcEEEEecCccccCCCCCCCcccccccccHHHHHHhhcCCceee
Q 010075 218 GTERAKLHGWPNTYVFTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCL 292 (519)
Q Consensus 218 g~~~~~~~~~~n~Y~~sK~~aE~lv~~~-----~~~lp~~IvRPs~V~g~~~~p~~gw~~~~~~~~~~i~~~~~g~~~~~ 292 (519)
.....|+.||+..+.+++.. ..++.+..++||.|.++..+.+....+. ............
T Consensus 169 --------~~~~~Y~~sK~a~~~l~~~la~e~~~~girvn~v~Pg~v~t~~~~~~~~~~~~--~~~~~~~~~~~~----- 233 (278)
T PRK08277 169 --------TKVPAYSAAKAAISNFTQWLAVHFAKVGIRVNAIAPGFFLTEQNRALLFNEDG--SLTERANKILAH----- 233 (278)
T ss_pred --------CCCchhHHHHHHHHHHHHHHHHHhCccCeEEEEEEeccCcCcchhhhhccccc--cchhHHHHHhcc-----
Confidence 12346999999999888755 3479999999999988753221100000 000011111111
Q ss_pred ccCCCceeeeeeHHHHHHHHHHHHHHhccCCCCCcEEEecCC
Q 010075 293 VGETKVIMDVIPVDMVVNAMIVAMVAHAKQPSDANIYHVGSS 334 (519)
Q Consensus 293 ~~~~~~~~d~vpVDdva~aii~a~~~~~~~~~~~~iyni~s~ 334 (519)
....-+...+|+|++++.++.......-.+.+..+.+|
T Consensus 234 ----~p~~r~~~~~dva~~~~~l~s~~~~~~~tG~~i~vdgG 271 (278)
T PRK08277 234 ----TPMGRFGKPEELLGTLLWLADEKASSFVTGVVLPVDGG 271 (278)
T ss_pred ----CCccCCCCHHHHHHHHHHHcCccccCCcCCCEEEECCC
Confidence 11223566799999999887641222223566777655
|
|
| >PRK05786 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.57 E-value=1.3e-13 Score=133.81 Aligned_cols=221 Identities=17% Similarity=0.136 Sum_probs=138.3
Q ss_pred cCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 010075 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (519)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (519)
+++++||||||||+||+++++.|++.| .+|+++.|+... .+++.+++ .. ..++++
T Consensus 3 ~~~~~vlItGa~g~iG~~~a~~l~~~G---~~V~~~~r~~~~---~~~~~~~~---------~~----------~~~~~~ 57 (238)
T PRK05786 3 LKGKKVAIIGVSEGLGYAVAYFALKEG---AQVCINSRNENK---LKRMKKTL---------SK----------YGNIHY 57 (238)
T ss_pred cCCcEEEEECCCchHHHHHHHHHHHCC---CEEEEEeCCHHH---HHHHHHHH---------Hh----------cCCeEE
Confidence 357999999999999999999999988 578999886422 12221110 00 135788
Q ss_pred EeccCCCCCCCCChhhhHHHHhcCccEEEEcCccCCc-----cccHHHHHHHhHHHHHHHHHHHHhc-cCCceEEEEecc
Q 010075 90 VPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF-----DERYDVAFGINTLGVIHLVNFAKKC-VKLKVFVHVSTA 163 (519)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~~~vdiViH~Aa~v~f-----~~~~~~~~~~Nv~gt~~ll~~a~~~-~~l~~~V~vSTa 163 (519)
+.+|+++++-.....+........+|.+||+|+.... .+.++..+++|+.++..+++.+.++ .+-.++|++||.
T Consensus 58 ~~~Dl~~~~~~~~~~~~~~~~~~~id~ii~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~ss~ 137 (238)
T PRK05786 58 VVGDVSSTESARNVIEKAAKVLNAIDGLVVTVGGYVEDTVEEFSGLEEMLTNHIKIPLYAVNASLRFLKEGSSIVLVSSM 137 (238)
T ss_pred EECCCCCHHHHHHHHHHHHHHhCCCCEEEEcCCCcCCCchHHHHHHHHHHHHhchHHHHHHHHHHHHHhcCCEEEEEecc
Confidence 9999996421100000011123457999999986432 1345667899999998888877653 223578999886
Q ss_pred eeecCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcHHHHHHHHHHHHHH
Q 010075 164 YVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLMQ 243 (519)
Q Consensus 164 ~v~~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~Y~~sK~~aE~lv~ 243 (519)
...... . .+...|+.+|+..+.+++
T Consensus 138 ~~~~~~--------~-----------------------------------------------~~~~~Y~~sK~~~~~~~~ 162 (238)
T PRK05786 138 SGIYKA--------S-----------------------------------------------PDQLSYAVAKAGLAKAVE 162 (238)
T ss_pred hhcccC--------C-----------------------------------------------CCchHHHHHHHHHHHHHH
Confidence 431100 0 123469999998887776
Q ss_pred Hh-----hcCCcEEEEecCccccCCCCCCCcccccccccHHHHHHhhcCCceeeccCCCceeeeeeHHHHHHHHHHHHHH
Q 010075 244 QS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMIVAMVA 318 (519)
Q Consensus 244 ~~-----~~~lp~~IvRPs~V~g~~~~p~~gw~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~d~vpVDdva~aii~a~~~ 318 (519)
.. ..+++++++||+.|+++.. +-..|. . . .. .....++.++++++++.++..
T Consensus 163 ~~~~~~~~~gi~v~~i~pg~v~~~~~-~~~~~~---------------~-~---~~---~~~~~~~~~~va~~~~~~~~~ 219 (238)
T PRK05786 163 ILASELLGRGIRVNGIAPTTISGDFE-PERNWK---------------K-L---RK---LGDDMAPPEDFAKVIIWLLTD 219 (238)
T ss_pred HHHHHHhhcCeEEEEEecCccCCCCC-chhhhh---------------h-h---cc---ccCCCCCHHHHHHHHHHHhcc
Confidence 54 3589999999999998642 100110 0 0 00 011357889999999998864
Q ss_pred hccCCCCCcEEEecCC
Q 010075 319 HAKQPSDANIYHVGSS 334 (519)
Q Consensus 319 ~~~~~~~~~iyni~s~ 334 (519)
... ...+.++.+.++
T Consensus 220 ~~~-~~~g~~~~~~~~ 234 (238)
T PRK05786 220 EAD-WVDGVVIPVDGG 234 (238)
T ss_pred ccc-CccCCEEEECCc
Confidence 322 123566666543
|
|
| >PRK07063 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.57 E-value=3.6e-13 Score=132.86 Aligned_cols=227 Identities=16% Similarity=0.140 Sum_probs=143.1
Q ss_pred cCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 010075 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (519)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (519)
+++|+|+||||+|+||+++++.|++.| .+|+++.|+... .+.+.+++ ++.. ...++.+
T Consensus 5 l~~k~vlVtGas~gIG~~~a~~l~~~G---~~vv~~~r~~~~---~~~~~~~~---------~~~~-------~~~~~~~ 62 (260)
T PRK07063 5 LAGKVALVTGAAQGIGAAIARAFAREG---AAVALADLDAAL---AERAAAAI---------ARDV-------AGARVLA 62 (260)
T ss_pred cCCCEEEEECCCchHHHHHHHHHHHCC---CEEEEEeCCHHH---HHHHHHHH---------Hhcc-------CCceEEE
Confidence 678999999999999999999999988 578888886432 22222111 1100 1246889
Q ss_pred EeccCCCCCCCCChhhhHHHHh-------cCccEEEEcCccCCc-------cccHHHHHHHhHHHHHHHHHHHHh-c--c
Q 010075 90 VPGDISSEDLGLKDSNLKEELW-------NELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKK-C--V 152 (519)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~-------~~vdiViH~Aa~v~f-------~~~~~~~~~~Nv~gt~~ll~~a~~-~--~ 152 (519)
+.+|++++. + ...++ ..+|++||+||.... .+.++..+++|+.|+..+++.+.. + .
T Consensus 63 ~~~Dl~~~~------~-~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~ 135 (260)
T PRK07063 63 VPADVTDAA------S-VAAAVAAAEEAFGPLDVLVNNAGINVFADPLAMTDEDWRRCFAVDLDGAWNGCRAVLPGMVER 135 (260)
T ss_pred EEccCCCHH------H-HHHHHHHHHHHhCCCcEEEECCCcCCCCChhhCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhh
Confidence 999999632 2 22332 369999999997532 246778899999999998887653 1 2
Q ss_pred CCceEEEEecceeecCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcHHH
Q 010075 153 KLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYV 232 (519)
Q Consensus 153 ~l~~~V~vSTa~v~~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~Y~ 232 (519)
+..++|++||....... .....|+
T Consensus 136 ~~g~iv~isS~~~~~~~--------------------------------------------------------~~~~~Y~ 159 (260)
T PRK07063 136 GRGSIVNIASTHAFKII--------------------------------------------------------PGCFPYP 159 (260)
T ss_pred CCeEEEEECChhhccCC--------------------------------------------------------CCchHHH
Confidence 44689999997543211 1224699
Q ss_pred HHHHHHHHHHHHh-----hcCCcEEEEecCccccCCCCCCCcccccccccHHHHHHhhcCCceeeccCCCceeeeeeHHH
Q 010075 233 FTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDM 307 (519)
Q Consensus 233 ~sK~~aE~lv~~~-----~~~lp~~IvRPs~V~g~~~~p~~gw~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~d~vpVDd 307 (519)
.||+..+.+++.. ..++.+..++||.|-.+..... |.. ............ ... + ..-+...+|
T Consensus 160 ~sKaa~~~~~~~la~el~~~gIrvn~v~PG~v~t~~~~~~--~~~-~~~~~~~~~~~~-~~~---~-----~~r~~~~~~ 227 (260)
T PRK07063 160 VAKHGLLGLTRALGIEYAARNVRVNAIAPGYIETQLTEDW--WNA-QPDPAAARAETL-ALQ---P-----MKRIGRPEE 227 (260)
T ss_pred HHHHHHHHHHHHHHHHhCccCeEEEEEeeCCccChhhhhh--hhc-cCChHHHHHHHH-hcC---C-----CCCCCCHHH
Confidence 9999999888765 3479999999999866542110 100 000000111110 100 1 112456799
Q ss_pred HHHHHHHHHHHhccCCCCCcEEEecCC
Q 010075 308 VVNAMIVAMVAHAKQPSDANIYHVGSS 334 (519)
Q Consensus 308 va~aii~a~~~~~~~~~~~~iyni~s~ 334 (519)
+|++++.++..... .-.+.+..+.+|
T Consensus 228 va~~~~fl~s~~~~-~itG~~i~vdgg 253 (260)
T PRK07063 228 VAMTAVFLASDEAP-FINATCITIDGG 253 (260)
T ss_pred HHHHHHHHcCcccc-ccCCcEEEECCC
Confidence 99999988753221 123566666555
|
|
| >PRK09242 tropinone reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.57 E-value=2.6e-13 Score=133.67 Aligned_cols=230 Identities=15% Similarity=0.192 Sum_probs=145.1
Q ss_pred cCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 010075 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (519)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (519)
++||+++||||+|+||+.++++|++.| .+|+++.|+... .+.+.+ .++...+ ..++.+
T Consensus 7 ~~~k~~lItGa~~gIG~~~a~~l~~~G---~~v~~~~r~~~~---~~~~~~---------~l~~~~~-------~~~~~~ 64 (257)
T PRK09242 7 LDGQTALITGASKGIGLAIAREFLGLG---ADVLIVARDADA---LAQARD---------ELAEEFP-------EREVHG 64 (257)
T ss_pred cCCCEEEEeCCCchHHHHHHHHHHHcC---CEEEEEeCCHHH---HHHHHH---------HHHhhCC-------CCeEEE
Confidence 578999999999999999999999988 578888886422 122221 1111111 247889
Q ss_pred EeccCCCCCCCCChhhhHHHHhcCccEEEEcCccCCc-------cccHHHHHHHhHHHHHHHHHHHHh-c--cCCceEEE
Q 010075 90 VPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKK-C--VKLKVFVH 159 (519)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~~~vdiViH~Aa~v~f-------~~~~~~~~~~Nv~gt~~ll~~a~~-~--~~l~~~V~ 159 (519)
+.+|+++++--....+.......++|+|||+|+.... .+.++..+.+|+.|+..+++.+.. + .+..++|+
T Consensus 65 ~~~Dl~~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~ 144 (257)
T PRK09242 65 LAADVSDDEDRRAILDWVEDHWDGLHILVNNAGGNIRKAAIDYTEDEWRGIFETNLFSAFELSRYAHPLLKQHASSAIVN 144 (257)
T ss_pred EECCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCceEEE
Confidence 9999996321000001111223468999999997422 256778899999999999888753 1 24578999
Q ss_pred EecceeecCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcHHHHHHHHHH
Q 010075 160 VSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGE 239 (519)
Q Consensus 160 vSTa~v~~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~Y~~sK~~aE 239 (519)
+||....... .....|+.+|...+
T Consensus 145 ~sS~~~~~~~--------------------------------------------------------~~~~~Y~~sK~a~~ 168 (257)
T PRK09242 145 IGSVSGLTHV--------------------------------------------------------RSGAPYGMTKAALL 168 (257)
T ss_pred ECccccCCCC--------------------------------------------------------CCCcchHHHHHHHH
Confidence 9998654321 12356999999999
Q ss_pred HHHHHh-----hcCCcEEEEecCccccCCCCCCCcccccccccHHHHHHhhcCCceeeccCCCceeeeeeHHHHHHHHHH
Q 010075 240 MLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMIV 314 (519)
Q Consensus 240 ~lv~~~-----~~~lp~~IvRPs~V~g~~~~p~~gw~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~d~vpVDdva~aii~ 314 (519)
.+++.. ..++++..++||.|.++...+ +... ........... ...-+...+|+++++..
T Consensus 169 ~~~~~la~e~~~~~i~v~~i~Pg~i~t~~~~~---~~~~----~~~~~~~~~~~---------~~~~~~~~~~va~~~~~ 232 (257)
T PRK09242 169 QMTRNLAVEWAEDGIRVNAVAPWYIRTPLTSG---PLSD----PDYYEQVIERT---------PMRRVGEPEEVAAAVAF 232 (257)
T ss_pred HHHHHHHHHHHHhCeEEEEEEECCCCCccccc---ccCC----hHHHHHHHhcC---------CCCCCcCHHHHHHHHHH
Confidence 888754 357999999999998765422 1111 11111111110 01113456899999988
Q ss_pred HHHHhccCCCCCcEEEecCC
Q 010075 315 AMVAHAKQPSDANIYHVGSS 334 (519)
Q Consensus 315 a~~~~~~~~~~~~iyni~s~ 334 (519)
++..... .-.++++++.++
T Consensus 233 l~~~~~~-~~~g~~i~~~gg 251 (257)
T PRK09242 233 LCMPAAS-YITGQCIAVDGG 251 (257)
T ss_pred HhCcccc-cccCCEEEECCC
Confidence 8753221 113567777554
|
|
| >PRK07035 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.57 E-value=1.4e-13 Score=135.05 Aligned_cols=225 Identities=13% Similarity=0.139 Sum_probs=142.2
Q ss_pred cCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 010075 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (519)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (519)
+++|+|+||||+|+||+++++.|++.| .+|+++.|+... .+++.++ +.+. ..++..
T Consensus 6 l~~k~vlItGas~gIG~~l~~~l~~~G---~~Vi~~~r~~~~---~~~~~~~---------~~~~---------~~~~~~ 61 (252)
T PRK07035 6 LTGKIALVTGASRGIGEAIAKLLAQQG---AHVIVSSRKLDG---CQAVADA---------IVAA---------GGKAEA 61 (252)
T ss_pred cCCCEEEEECCCcHHHHHHHHHHHHCC---CEEEEEeCCHHH---HHHHHHH---------HHhc---------CCeEEE
Confidence 568999999999999999999999988 578888886422 2222211 1110 135678
Q ss_pred EeccCCCCCCCCChhhhHHH---HhcCccEEEEcCccCCc--------cccHHHHHHHhHHHHHHHHHHHHhc---cCCc
Q 010075 90 VPGDISSEDLGLKDSNLKEE---LWNELDIMVNSAAITKF--------DERYDVAFGINTLGVIHLVNFAKKC---VKLK 155 (519)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~---l~~~vdiViH~Aa~v~f--------~~~~~~~~~~Nv~gt~~ll~~a~~~---~~l~ 155 (519)
+.+|++++.- ..+..+. ...++|+|||+|+.... .+.++..+++|+.|+..+++.+.+. .+..
T Consensus 62 ~~~D~~~~~~---~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~ 138 (252)
T PRK07035 62 LACHIGEMEQ---IDALFAHIRERHGRLDILVNNAAANPYFGHILDTDLGAFQKTVDVNIRGYFFMSVEAGKLMKEQGGG 138 (252)
T ss_pred EEcCCCCHHH---HHHHHHHHHHHcCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCc
Confidence 8999996321 0011111 12368999999986421 1346678999999998887766322 2457
Q ss_pred eEEEEecceeecCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcHHHHHH
Q 010075 156 VFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTK 235 (519)
Q Consensus 156 ~~V~vSTa~v~~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~Y~~sK 235 (519)
+++++||....... .....|+.||
T Consensus 139 ~iv~~sS~~~~~~~--------------------------------------------------------~~~~~Y~~sK 162 (252)
T PRK07035 139 SIVNVASVNGVSPG--------------------------------------------------------DFQGIYSITK 162 (252)
T ss_pred EEEEECchhhcCCC--------------------------------------------------------CCCcchHHHH
Confidence 89999986432211 1235699999
Q ss_pred HHHHHHHHHh-----hcCCcEEEEecCccccCCCCCCCcccccccccHHHHHHhhcCCceeeccCCCceeeeeeHHHHHH
Q 010075 236 TMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVN 310 (519)
Q Consensus 236 ~~aE~lv~~~-----~~~lp~~IvRPs~V~g~~~~p~~gw~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~d~vpVDdva~ 310 (519)
+..|.+++.+ ..++++..+.||.|..+..... ..+ ........... ....+...+++|+
T Consensus 163 ~al~~~~~~l~~e~~~~gi~v~~i~PG~v~t~~~~~~---~~~----~~~~~~~~~~~---------~~~~~~~~~~va~ 226 (252)
T PRK07035 163 AAVISMTKAFAKECAPFGIRVNALLPGLTDTKFASAL---FKN----DAILKQALAHI---------PLRRHAEPSEMAG 226 (252)
T ss_pred HHHHHHHHHHHHHHhhcCEEEEEEeeccccCcccccc---cCC----HHHHHHHHccC---------CCCCcCCHHHHHH
Confidence 9999998866 3479999999999866543211 111 11111111110 0122456789999
Q ss_pred HHHHHHHHhccCCCCCcEEEecCC
Q 010075 311 AMIVAMVAHAKQPSDANIYHVGSS 334 (519)
Q Consensus 311 aii~a~~~~~~~~~~~~iyni~s~ 334 (519)
+++.++..... ...+.++.+.+|
T Consensus 227 ~~~~l~~~~~~-~~~g~~~~~dgg 249 (252)
T PRK07035 227 AVLYLASDASS-YTTGECLNVDGG 249 (252)
T ss_pred HHHHHhCcccc-CccCCEEEeCCC
Confidence 99998864322 223677777655
|
|
| >PRK06947 glucose-1-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.57 E-value=1e-13 Score=135.68 Aligned_cols=223 Identities=16% Similarity=0.143 Sum_probs=133.7
Q ss_pred CCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEEe
Q 010075 12 NKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVP 91 (519)
Q Consensus 12 ~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v~ 91 (519)
.|+|+||||||+||+.+++.|++.| .+|+++.++... ..+.+. +.++. . ..++..+.
T Consensus 2 ~k~ilItGas~giG~~la~~l~~~g---~~v~~~~~~~~~--~~~~~~---------~~~~~-~--------~~~~~~~~ 58 (248)
T PRK06947 2 RKVVLITGASRGIGRATAVLAAARG---WSVGINYARDAA--AAEETA---------DAVRA-A--------GGRACVVA 58 (248)
T ss_pred CcEEEEeCCCCcHHHHHHHHHHHCC---CEEEEEeCCCHH--HHHHHH---------HHHHh-c--------CCcEEEEE
Confidence 3689999999999999999999988 466665543211 111111 11111 0 24688999
Q ss_pred ccCCCCCCCCChhhhHHHH---hcCccEEEEcCccCCc--------cccHHHHHHHhHHHHHHHHHH-HHhccC-----C
Q 010075 92 GDISSEDLGLKDSNLKEEL---WNELDIMVNSAAITKF--------DERYDVAFGINTLGVIHLVNF-AKKCVK-----L 154 (519)
Q Consensus 92 gDl~~~~lgls~~~~~~~l---~~~vdiViH~Aa~v~f--------~~~~~~~~~~Nv~gt~~ll~~-a~~~~~-----l 154 (519)
+|++++.. -.+..+.+ ...+|+|||+||.... .+.++..+.+|+.|+..+++. +..+.. -
T Consensus 59 ~Dl~~~~~---~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~ 135 (248)
T PRK06947 59 GDVANEAD---VIAMFDAVQSAFGRLDALVNNAGIVAPSMPLADMDAARLRRMFDTNVLGAYLCAREAARRLSTDRGGRG 135 (248)
T ss_pred eccCCHHH---HHHHHHHHHHhcCCCCEEEECCccCCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCCCC
Confidence 99996421 01111111 2469999999996432 134567799999999888754 333311 2
Q ss_pred ceEEEEecceee-cCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcHHHH
Q 010075 155 KVFVHVSTAYVA-GERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVF 233 (519)
Q Consensus 155 ~~~V~vSTa~v~-~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~Y~~ 233 (519)
.+||++||.... +.. .....|+.
T Consensus 136 ~~ii~~sS~~~~~~~~--------------------------------------------------------~~~~~Y~~ 159 (248)
T PRK06947 136 GAIVNVSSIASRLGSP--------------------------------------------------------NEYVDYAG 159 (248)
T ss_pred cEEEEECchhhcCCCC--------------------------------------------------------CCCcccHh
Confidence 359999986532 211 11236999
Q ss_pred HHHHHHHHHHHh-----hcCCcEEEEecCccccCCCCCCCcccccccccHHHHHHhhcCCceeeccCCCceeeeeeHHHH
Q 010075 234 TKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMV 308 (519)
Q Consensus 234 sK~~aE~lv~~~-----~~~lp~~IvRPs~V~g~~~~p~~gw~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~d~vpVDdv 308 (519)
||+..+.+++.. ..+++++++|||.|..+.... .+......... +.. + ..-...++++
T Consensus 160 sK~~~~~~~~~la~~~~~~~i~v~~i~Pg~v~t~~~~~--------~~~~~~~~~~~-~~~---~-----~~~~~~~e~v 222 (248)
T PRK06947 160 SKGAVDTLTLGLAKELGPHGVRVNAVRPGLIETEIHAS--------GGQPGRAARLG-AQT---P-----LGRAGEADEV 222 (248)
T ss_pred hHHHHHHHHHHHHHHhhhhCcEEEEEeccCcccccccc--------cCCHHHHHHHh-hcC---C-----CCCCcCHHHH
Confidence 999999887754 347999999999997764211 00001111110 000 0 0113578999
Q ss_pred HHHHHHHHHHhccCCCCCcEEEecCC
Q 010075 309 VNAMIVAMVAHAKQPSDANIYHVGSS 334 (519)
Q Consensus 309 a~aii~a~~~~~~~~~~~~iyni~s~ 334 (519)
+++++.++.... ....+.++.+.+|
T Consensus 223 a~~~~~l~~~~~-~~~~G~~~~~~gg 247 (248)
T PRK06947 223 AETIVWLLSDAA-SYVTGALLDVGGG 247 (248)
T ss_pred HHHHHHHcCccc-cCcCCceEeeCCC
Confidence 999998876432 2223566666544
|
|
| >PRK06172 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.55 E-value=2.3e-13 Score=133.64 Aligned_cols=222 Identities=17% Similarity=0.151 Sum_probs=143.1
Q ss_pred cCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 010075 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (519)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (519)
+++|+|+||||+|+||+++++.|++.| .+|+++.|+... .+++.++ +.+ ...++..
T Consensus 5 l~~k~ilItGas~~iG~~ia~~l~~~G---~~v~~~~r~~~~---~~~~~~~---------~~~---------~~~~~~~ 60 (253)
T PRK06172 5 FSGKVALVTGGAAGIGRATALAFAREG---AKVVVADRDAAG---GEETVAL---------IRE---------AGGEALF 60 (253)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHcC---CEEEEEeCCHHH---HHHHHHH---------HHh---------cCCceEE
Confidence 578999999999999999999999988 578888887532 1222111 111 1256889
Q ss_pred EeccCCCCCCCCChhhhHHHH-------hcCccEEEEcCccCC----c----cccHHHHHHHhHHHHHHHHHHHHh-c--
Q 010075 90 VPGDISSEDLGLKDSNLKEEL-------WNELDIMVNSAAITK----F----DERYDVAFGINTLGVIHLVNFAKK-C-- 151 (519)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l-------~~~vdiViH~Aa~v~----f----~~~~~~~~~~Nv~gt~~ll~~a~~-~-- 151 (519)
+.+|++++. ....+ ..++|+|||+|+... + .+.++..+++|+.++..+++.+.. +
T Consensus 61 ~~~D~~~~~-------~i~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~ 133 (253)
T PRK06172 61 VACDVTRDA-------EVKALVEQTIAAYGRLDYAFNNAGIEIEQGRLAEGSEAEFDAIMGVNVKGVWLCMKYQIPLMLA 133 (253)
T ss_pred EEcCCCCHH-------HHHHHHHHHHHHhCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHh
Confidence 999999632 22222 246899999999642 1 245677789999999877665432 1
Q ss_pred cCCceEEEEecceeecCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcHH
Q 010075 152 VKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTY 231 (519)
Q Consensus 152 ~~l~~~V~vSTa~v~~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~Y 231 (519)
.+..++|++||...+... .....|
T Consensus 134 ~~~~~ii~~sS~~~~~~~--------------------------------------------------------~~~~~Y 157 (253)
T PRK06172 134 QGGGAIVNTASVAGLGAA--------------------------------------------------------PKMSIY 157 (253)
T ss_pred cCCcEEEEECchhhccCC--------------------------------------------------------CCCchh
Confidence 245689999997654321 123569
Q ss_pred HHHHHHHHHHHHHh-----hcCCcEEEEecCccccCCCCCCCcccccccccHHHHHHhhcCCceeeccCCCceeeeeeHH
Q 010075 232 VFTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVD 306 (519)
Q Consensus 232 ~~sK~~aE~lv~~~-----~~~lp~~IvRPs~V~g~~~~p~~gw~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~d~vpVD 306 (519)
+.||+..+.+++.. ..++.+..+.||.|-.+..++.+. .......... ... ....+...+
T Consensus 158 ~~sKaa~~~~~~~la~e~~~~~i~v~~i~PG~v~t~~~~~~~~------~~~~~~~~~~-~~~--------~~~~~~~p~ 222 (253)
T PRK06172 158 AASKHAVIGLTKSAAIEYAKKGIRVNAVCPAVIDTDMFRRAYE------ADPRKAEFAA-AMH--------PVGRIGKVE 222 (253)
T ss_pred HHHHHHHHHHHHHHHHHhcccCeEEEEEEeCCccChhhhhhcc------cChHHHHHHh-ccC--------CCCCccCHH
Confidence 99999998888765 347999999999886654332211 0111111111 100 111245689
Q ss_pred HHHHHHHHHHHHhccCCCCCcEEEecCC
Q 010075 307 MVVNAMIVAMVAHAKQPSDANIYHVGSS 334 (519)
Q Consensus 307 dva~aii~a~~~~~~~~~~~~iyni~s~ 334 (519)
++++.++.++..... .-.+.+.++.+|
T Consensus 223 ~ia~~~~~l~~~~~~-~~~G~~i~~dgg 249 (253)
T PRK06172 223 EVASAVLYLCSDGAS-FTTGHALMVDGG 249 (253)
T ss_pred HHHHHHHHHhCcccc-CcCCcEEEECCC
Confidence 999999888864322 223677777766
|
|
| >COG4221 Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.55 E-value=4.6e-13 Score=126.94 Aligned_cols=211 Identities=16% Similarity=0.160 Sum_probs=141.5
Q ss_pred hcCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceE
Q 010075 9 FLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKIT 88 (519)
Q Consensus 9 ~~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~ 88 (519)
..++|.|+|||||+.||.+.++.|.+.| .+|++..|+. +||++ |..+.+ ..++.
T Consensus 3 ~~~~kv~lITGASSGiG~A~A~~l~~~G---~~vvl~aRR~------drL~~----------la~~~~-------~~~~~ 56 (246)
T COG4221 3 TLKGKVALITGASSGIGEATARALAEAG---AKVVLAARRE------ERLEA----------LADEIG-------AGAAL 56 (246)
T ss_pred CCCCcEEEEecCcchHHHHHHHHHHHCC---CeEEEEeccH------HHHHH----------HHHhhc-------cCceE
Confidence 3467999999999999999999999999 7899999974 33331 222222 14688
Q ss_pred EEeccCCCCCCCCChhhhHHHHhcCccEEEEcCccCCc-------cccHHHHHHHhHHHHHHHHHHHHhc---cCCceEE
Q 010075 89 FVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKC---VKLKVFV 158 (519)
Q Consensus 89 ~v~gDl~~~~lgls~~~~~~~l~~~vdiViH~Aa~v~f-------~~~~~~~~~~Nv~gt~~ll~~a~~~---~~l~~~V 158 (519)
++..|++++.--...-.....-..++|++||+||.... .++++.++++|+.|..+..++.... ++-..+|
T Consensus 57 ~~~~DVtD~~~~~~~i~~~~~~~g~iDiLvNNAGl~~g~~~~~~~~~dw~~Mid~Ni~G~l~~~~avLP~m~~r~~G~Ii 136 (246)
T COG4221 57 ALALDVTDRAAVEAAIEALPEEFGRIDILVNNAGLALGDPLDEADLDDWDRMIDTNVKGLLNGTRAVLPGMVERKSGHII 136 (246)
T ss_pred EEeeccCCHHHHHHHHHHHHHhhCcccEEEecCCCCcCChhhhCCHHHHHHHHHHHHHHHHHHHHHhhhHHHhcCCceEE
Confidence 99999996421000001112334579999999998643 2678999999999988887766431 2455899
Q ss_pred EEecceeecCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcHHHHHHHHH
Q 010075 159 HVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMG 238 (519)
Q Consensus 159 ~vSTa~v~~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~Y~~sK~~a 238 (519)
.+||..-. .+| +..+.|+.||+..
T Consensus 137 N~~SiAG~---------~~y-----------------------------------------------~~~~vY~ATK~aV 160 (246)
T COG4221 137 NLGSIAGR---------YPY-----------------------------------------------PGGAVYGATKAAV 160 (246)
T ss_pred Eecccccc---------ccC-----------------------------------------------CCCccchhhHHHH
Confidence 99987532 112 3457899999988
Q ss_pred HHHHHHh-----hcCCcEEEEecCccccCCCC--CCCcccccccccHHHHHHhhcCCceeeccCCCceeeeeeHHHHHHH
Q 010075 239 EMLMQQS-----KENLSLVIIRPTVVSGTYKE--PFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNA 311 (519)
Q Consensus 239 E~lv~~~-----~~~lp~~IvRPs~V~g~~~~--p~~gw~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~d~vpVDdva~a 311 (519)
.++.... ..+++++.+-||.|..+.-. +.+| +. .-.... + .....+..+|+|++
T Consensus 161 ~~fs~~LR~e~~g~~IRVt~I~PG~v~~~~~s~v~~~g--~~-----~~~~~~--------y----~~~~~l~p~dIA~~ 221 (246)
T COG4221 161 RAFSLGLRQELAGTGIRVTVISPGLVETTEFSTVRFEG--DD-----ERADKV--------Y----KGGTALTPEDIAEA 221 (246)
T ss_pred HHHHHHHHHHhcCCCeeEEEecCceecceecccccCCc--hh-----hhHHHH--------h----ccCCCCCHHHHHHH
Confidence 8776543 45799999999999654321 1122 00 001110 1 12346888999999
Q ss_pred HHHHHHHhc
Q 010075 312 MIVAMVAHA 320 (519)
Q Consensus 312 ii~a~~~~~ 320 (519)
+..++..+.
T Consensus 222 V~~~~~~P~ 230 (246)
T COG4221 222 VLFAATQPQ 230 (246)
T ss_pred HHHHHhCCC
Confidence 999997543
|
|
| >PRK06197 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.55 E-value=1.4e-13 Score=139.46 Aligned_cols=182 Identities=14% Similarity=0.101 Sum_probs=116.4
Q ss_pred cCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 010075 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (519)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (519)
++||+|+||||||+||++++++|++.| .+|+++.|+.... +... +.+.+..+ ..++.+
T Consensus 14 ~~~k~vlItGas~gIG~~~a~~l~~~G---~~vi~~~r~~~~~---~~~~---------~~l~~~~~-------~~~~~~ 71 (306)
T PRK06197 14 QSGRVAVVTGANTGLGYETAAALAAKG---AHVVLAVRNLDKG---KAAA---------ARITAATP-------GADVTL 71 (306)
T ss_pred CCCCEEEEcCCCCcHHHHHHHHHHHCC---CEEEEEeCCHHHH---HHHH---------HHHHHhCC-------CCceEE
Confidence 578999999999999999999999988 5788888864221 1111 11111111 246788
Q ss_pred EeccCCCCCCCCChhhhHHHHh-------cCccEEEEcCccCCc-----cccHHHHHHHhHHH----HHHHHHHHHhccC
Q 010075 90 VPGDISSEDLGLKDSNLKEELW-------NELDIMVNSAAITKF-----DERYDVAFGINTLG----VIHLVNFAKKCVK 153 (519)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~-------~~vdiViH~Aa~v~f-----~~~~~~~~~~Nv~g----t~~ll~~a~~~~~ 153 (519)
+.+|++++. ..+.++ .++|+|||+||.... .+.++..+++|+.| +..+++.+++. +
T Consensus 72 ~~~Dl~d~~-------~v~~~~~~~~~~~~~iD~li~nAg~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~ll~~l~~~-~ 143 (306)
T PRK06197 72 QELDLTSLA-------SVRAAADALRAAYPRIDLLINNAGVMYTPKQTTADGFELQFGTNHLGHFALTGLLLDRLLPV-P 143 (306)
T ss_pred EECCCCCHH-------HHHHHHHHHHhhCCCCCEEEECCccccCCCccCCCCcchhhhhhhHHHHHHHHHHHHHHhhC-C
Confidence 999999632 222222 369999999997532 24567789999999 55566666553 4
Q ss_pred CceEEEEecceeecCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcHHHH
Q 010075 154 LKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVF 233 (519)
Q Consensus 154 l~~~V~vSTa~v~~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~Y~~ 233 (519)
..++|++||...........++.... ....+...|+.
T Consensus 144 ~~~iV~vSS~~~~~~~~~~~~~~~~~-------------------------------------------~~~~~~~~Y~~ 180 (306)
T PRK06197 144 GSRVVTVSSGGHRIRAAIHFDDLQWE-------------------------------------------RRYNRVAAYGQ 180 (306)
T ss_pred CCEEEEECCHHHhccCCCCccccCcc-------------------------------------------cCCCcHHHHHH
Confidence 57999999975432110000100000 00123467999
Q ss_pred HHHHHHHHHHHh-----hcCCcEEE--EecCccccCCC
Q 010075 234 TKTMGEMLMQQS-----KENLSLVI--IRPTVVSGTYK 264 (519)
Q Consensus 234 sK~~aE~lv~~~-----~~~lp~~I--vRPs~V~g~~~ 264 (519)
||+..+.+.+.+ ..++++.+ +.||.|..+..
T Consensus 181 SK~a~~~~~~~la~~l~~~~i~v~~v~~~PG~v~T~~~ 218 (306)
T PRK06197 181 SKLANLLFTYELQRRLAAAGATTIAVAAHPGVSNTELA 218 (306)
T ss_pred HHHHHHHHHHHHHHHhhcCCCCeEEEEeCCCcccCccc
Confidence 999999888765 23555544 47998876543
|
|
| >PRK08278 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.55 E-value=4.1e-13 Score=133.75 Aligned_cols=170 Identities=14% Similarity=0.168 Sum_probs=115.0
Q ss_pred cCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccH-HHHHHHHHhhhhhHHHHHhhhccccccccCCceE
Q 010075 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSA-ALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKIT 88 (519)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~-~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~ 88 (519)
+++|+++||||||+||+++++.|++.| .+|+++.|+...... ...+.+ ..+.++. . ..++.
T Consensus 4 ~~~k~vlItGas~gIG~~ia~~l~~~G---~~V~~~~r~~~~~~~~~~~l~~------~~~~~~~-~--------~~~~~ 65 (273)
T PRK08278 4 LSGKTLFITGASRGIGLAIALRAARDG---ANIVIAAKTAEPHPKLPGTIHT------AAEEIEA-A--------GGQAL 65 (273)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCC---CEEEEEecccccccchhhHHHH------HHHHHHh-c--------CCceE
Confidence 468999999999999999999999988 578888887543211 111110 0111111 1 24688
Q ss_pred EEeccCCCCCCCCChhhhHHHHh-------cCccEEEEcCccCCc-------cccHHHHHHHhHHHHHHHHHHHHhc---
Q 010075 89 FVPGDISSEDLGLKDSNLKEELW-------NELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKC--- 151 (519)
Q Consensus 89 ~v~gDl~~~~lgls~~~~~~~l~-------~~vdiViH~Aa~v~f-------~~~~~~~~~~Nv~gt~~ll~~a~~~--- 151 (519)
++.+|++++ +....++ .++|+|||+||.... .+.++..+++|+.|+.++++++...
T Consensus 66 ~~~~D~~~~-------~~i~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~ 138 (273)
T PRK08278 66 PLVGDVRDE-------DQVAAAVAKAVERFGGIDICVNNASAINLTGTEDTPMKRFDLMQQINVRGTFLVSQACLPHLKK 138 (273)
T ss_pred EEEecCCCH-------HHHHHHHHHHHHHhCCCCEEEECCCCcCCCCcccCCHHHHHHHHHHhchHHHHHHHHHHHHHHh
Confidence 999999963 2222222 379999999997542 1346778999999999999998642
Q ss_pred cCCceEEEEecceeecCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcHH
Q 010075 152 VKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTY 231 (519)
Q Consensus 152 ~~l~~~V~vSTa~v~~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~Y 231 (519)
.+-.+++++||.... .. . + .+....|
T Consensus 139 ~~~g~iv~iss~~~~--~~-----~-~----------------------------------------------~~~~~~Y 164 (273)
T PRK08278 139 SENPHILTLSPPLNL--DP-----K-W----------------------------------------------FAPHTAY 164 (273)
T ss_pred cCCCEEEEECCchhc--cc-----c-c----------------------------------------------cCCcchh
Confidence 123478888864211 00 0 0 0123579
Q ss_pred HHHHHHHHHHHHHh-----hcCCcEEEEecCc
Q 010075 232 VFTKTMGEMLMQQS-----KENLSLVIIRPTV 258 (519)
Q Consensus 232 ~~sK~~aE~lv~~~-----~~~lp~~IvRPs~ 258 (519)
+.||+..|.+++.+ ..++.++.+.|+.
T Consensus 165 ~~sK~a~~~~~~~la~el~~~~I~v~~i~Pg~ 196 (273)
T PRK08278 165 TMAKYGMSLCTLGLAEEFRDDGIAVNALWPRT 196 (273)
T ss_pred HHHHHHHHHHHHHHHHHhhhcCcEEEEEeCCC
Confidence 99999999998865 3479999999983
|
|
| >PRK07576 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.55 E-value=3.1e-13 Score=133.89 Aligned_cols=222 Identities=14% Similarity=0.110 Sum_probs=140.1
Q ss_pred cCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 010075 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (519)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (519)
+++++|+||||+|+||+.++++|++.| .+|+++.|+.... +++.++ +.+. ..++.+
T Consensus 7 ~~~k~ilItGasggIG~~la~~l~~~G---~~V~~~~r~~~~~---~~~~~~---------~~~~---------~~~~~~ 62 (264)
T PRK07576 7 FAGKNVVVVGGTSGINLGIAQAFARAG---ANVAVASRSQEKV---DAAVAQ---------LQQA---------GPEGLG 62 (264)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCC---CEEEEEeCCHHHH---HHHHHH---------HHHh---------CCceEE
Confidence 578999999999999999999999988 6788988874321 111111 1110 135678
Q ss_pred EeccCCCCCCCCChhhhHHHHh-------cCccEEEEcCccCCc-------cccHHHHHHHhHHHHHHHHHHHHhc-c-C
Q 010075 90 VPGDISSEDLGLKDSNLKEELW-------NELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKC-V-K 153 (519)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~-------~~vdiViH~Aa~v~f-------~~~~~~~~~~Nv~gt~~ll~~a~~~-~-~ 153 (519)
+.+|++++ +..+.++ ..+|+|||+|+.... .+.++..+++|+.|+.++++.+.+. . +
T Consensus 63 ~~~Dv~~~-------~~i~~~~~~~~~~~~~iD~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~ 135 (264)
T PRK07576 63 VSADVRDY-------AAVEAAFAQIADEFGPIDVLVSGAAGNFPAPAAGMSANGFKTVVDIDLLGTFNVLKAAYPLLRRP 135 (264)
T ss_pred EECCCCCH-------HHHHHHHHHHHHHcCCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhC
Confidence 99999953 2222322 358999999985321 2456777899999999999887642 1 2
Q ss_pred CceEEEEecceeecCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcHHHH
Q 010075 154 LKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVF 233 (519)
Q Consensus 154 l~~~V~vSTa~v~~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~Y~~ 233 (519)
-.++|++||....... .....|+.
T Consensus 136 ~g~iv~iss~~~~~~~--------------------------------------------------------~~~~~Y~a 159 (264)
T PRK07576 136 GASIIQISAPQAFVPM--------------------------------------------------------PMQAHVCA 159 (264)
T ss_pred CCEEEEECChhhccCC--------------------------------------------------------CCccHHHH
Confidence 2589999997543211 12346999
Q ss_pred HHHHHHHHHHHh-----hcCCcEEEEecCccccCCCCCCCcccccccccHHHHHHhhcCCceeeccCCCceeeeeeHHHH
Q 010075 234 TKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMV 308 (519)
Q Consensus 234 sK~~aE~lv~~~-----~~~lp~~IvRPs~V~g~~~~p~~gw~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~d~vpVDdv 308 (519)
||+..|.+++.. ..++.++.++|+.+.++.. ...+... .......... . ......+..|+
T Consensus 160 sK~a~~~l~~~la~e~~~~gi~v~~v~pg~~~~t~~--~~~~~~~-----~~~~~~~~~~---~-----~~~~~~~~~dv 224 (264)
T PRK07576 160 AKAGVDMLTRTLALEWGPEGIRVNSIVPGPIAGTEG--MARLAPS-----PELQAAVAQS---V-----PLKRNGTKQDI 224 (264)
T ss_pred HHHHHHHHHHHHHHHhhhcCeEEEEEecccccCcHH--HhhcccC-----HHHHHHHHhc---C-----CCCCCCCHHHH
Confidence 999999998865 3578999999998865321 0111110 0111100000 0 11234678999
Q ss_pred HHHHHHHHHHhccCCCCCcEEEecCC
Q 010075 309 VNAMIVAMVAHAKQPSDANIYHVGSS 334 (519)
Q Consensus 309 a~aii~a~~~~~~~~~~~~iyni~s~ 334 (519)
|++++.++..... .-.+....+.++
T Consensus 225 a~~~~~l~~~~~~-~~~G~~~~~~gg 249 (264)
T PRK07576 225 ANAALFLASDMAS-YITGVVLPVDGG 249 (264)
T ss_pred HHHHHHHcChhhc-CccCCEEEECCC
Confidence 9999998863221 112455566554
|
|
| >PRK07792 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.55 E-value=2.2e-13 Score=138.05 Aligned_cols=220 Identities=20% Similarity=0.176 Sum_probs=139.6
Q ss_pred hhhcCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCc
Q 010075 7 VEFLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEK 86 (519)
Q Consensus 7 ~~~~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~ 86 (519)
..-++||+++||||+|+||++++++|++.| .+|++..|.... ..+.+.++ ++.. ..+
T Consensus 7 ~~~l~~k~~lVTGas~gIG~~ia~~L~~~G---a~Vv~~~~~~~~--~~~~~~~~---------i~~~---------g~~ 63 (306)
T PRK07792 7 TTDLSGKVAVVTGAAAGLGRAEALGLARLG---ATVVVNDVASAL--DASDVLDE---------IRAA---------GAK 63 (306)
T ss_pred CcCCCCCEEEEECCCChHHHHHHHHHHHCC---CEEEEecCCchh--HHHHHHHH---------HHhc---------CCe
Confidence 344789999999999999999999999998 567777665321 11222111 1110 246
Q ss_pred eEEEeccCCCCCCCCChhhhHHHH------hcCccEEEEcCccCCc-------cccHHHHHHHhHHHHHHHHHHHHhc-c
Q 010075 87 ITFVPGDISSEDLGLKDSNLKEEL------WNELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKC-V 152 (519)
Q Consensus 87 v~~v~gDl~~~~lgls~~~~~~~l------~~~vdiViH~Aa~v~f-------~~~~~~~~~~Nv~gt~~ll~~a~~~-~ 152 (519)
+.++.+|+++++ ..+.+ ..++|+|||+||.... .+.++..+++|+.|+..+++.+... .
T Consensus 64 ~~~~~~Dv~d~~-------~~~~~~~~~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~vn~~g~~~l~~~~~~~~~ 136 (306)
T PRK07792 64 AVAVAGDISQRA-------TADELVATAVGLGGLDIVVNNAGITRDRMLFNMSDEEWDAVIAVHLRGHFLLTRNAAAYWR 136 (306)
T ss_pred EEEEeCCCCCHH-------HHHHHHHHHHHhCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHH
Confidence 889999999632 22232 2469999999998642 2457778999999999999876431 0
Q ss_pred ---------CCceEEEEecceeecCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccc
Q 010075 153 ---------KLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAK 223 (519)
Q Consensus 153 ---------~l~~~V~vSTa~v~~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~ 223 (519)
.-.++|++||.......
T Consensus 137 ~~~~~~~~~~~g~iv~isS~~~~~~~------------------------------------------------------ 162 (306)
T PRK07792 137 AKAKAAGGPVYGRIVNTSSEAGLVGP------------------------------------------------------ 162 (306)
T ss_pred HhhcccCCCCCcEEEEECCcccccCC------------------------------------------------------
Confidence 12479999986543211
Q ss_pred cCCCCcHHHHHHHHHHHHHHHh-----hcCCcEEEEecCccccCCCCCCCcccccccccHHHHHHhhcCCceeeccCCCc
Q 010075 224 LHGWPNTYVFTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKV 298 (519)
Q Consensus 224 ~~~~~n~Y~~sK~~aE~lv~~~-----~~~lp~~IvRPs~V~g~~~~p~~gw~~~~~~~~~~i~~~~~g~~~~~~~~~~~ 298 (519)
.....|+.+|+..+.+++.+ ..++++..+.|+. ...... +.... ... .. ..
T Consensus 163 --~~~~~Y~asKaal~~l~~~la~e~~~~gI~vn~i~Pg~-~t~~~~---~~~~~---~~~------------~~---~~ 218 (306)
T PRK07792 163 --VGQANYGAAKAGITALTLSAARALGRYGVRANAICPRA-RTAMTA---DVFGD---APD------------VE---AG 218 (306)
T ss_pred --CCCchHHHHHHHHHHHHHHHHHHhhhcCeEEEEECCCC-CCchhh---hhccc---cch------------hh---hh
Confidence 11246999999999988754 3579999999973 111100 00000 000 00 01
Q ss_pred eeeeeeHHHHHHHHHHHHHHhccCCCCCcEEEecCCC
Q 010075 299 IMDVIPVDMVVNAMIVAMVAHAKQPSDANIYHVGSSL 335 (519)
Q Consensus 299 ~~d~vpVDdva~aii~a~~~~~~~~~~~~iyni~s~~ 335 (519)
..+.++.++|++++..++.... ....+++|.+.+|.
T Consensus 219 ~~~~~~pe~va~~v~~L~s~~~-~~~tG~~~~v~gg~ 254 (306)
T PRK07792 219 GIDPLSPEHVVPLVQFLASPAA-AEVNGQVFIVYGPM 254 (306)
T ss_pred ccCCCCHHHHHHHHHHHcCccc-cCCCCCEEEEcCCe
Confidence 1233578999999888775322 12246788887663
|
|
| >TIGR01829 AcAcCoA_reduct acetoacetyl-CoA reductase | Back alignment and domain information |
|---|
Probab=99.55 E-value=6.8e-13 Score=129.03 Aligned_cols=220 Identities=12% Similarity=0.112 Sum_probs=136.7
Q ss_pred CEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEEec
Q 010075 13 KTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVPG 92 (519)
Q Consensus 13 k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v~g 92 (519)
|+++||||||+||+++++.|++.| .+|+++.|+.. ...+.+.++ +.. ...++.++.+
T Consensus 1 k~~lItG~sg~iG~~la~~l~~~G---~~v~~~~r~~~--~~~~~~~~~---------~~~---------~~~~~~~~~~ 57 (242)
T TIGR01829 1 RIALVTGGMGGIGTAICQRLAKDG---YRVAANCGPNE--ERAEAWLQE---------QGA---------LGFDFRVVEG 57 (242)
T ss_pred CEEEEECCCChHHHHHHHHHHHCC---CEEEEEeCCCH--HHHHHHHHH---------HHh---------hCCceEEEEe
Confidence 689999999999999999999988 57788888421 111111100 000 1246889999
Q ss_pred cCCCCCCCCChhhhHH---HHhcCccEEEEcCccCCc-------cccHHHHHHHhHHHHHHHHHHH----HhccCCceEE
Q 010075 93 DISSEDLGLKDSNLKE---ELWNELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFA----KKCVKLKVFV 158 (519)
Q Consensus 93 Dl~~~~lgls~~~~~~---~l~~~vdiViH~Aa~v~f-------~~~~~~~~~~Nv~gt~~ll~~a----~~~~~l~~~V 158 (519)
|++++.- -....+ .....+|+|||+||.... .+.++..+++|+.++..+++.+ ++ .+.+++|
T Consensus 58 D~~~~~~---~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~-~~~~~iv 133 (242)
T TIGR01829 58 DVSSFES---CKAAVAKVEAELGPIDVLVNNAGITRDATFKKMTYEQWSAVIDTNLNSVFNVTQPVIDGMRE-RGWGRII 133 (242)
T ss_pred cCCCHHH---HHHHHHHHHHHcCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHh-cCCcEEE
Confidence 9996320 011111 112469999999987532 1356777899999988865554 33 2567899
Q ss_pred EEecceeecCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcHHHHHHHHH
Q 010075 159 HVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMG 238 (519)
Q Consensus 159 ~vSTa~v~~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~Y~~sK~~a 238 (519)
++||....... .....|+.+|...
T Consensus 134 ~iss~~~~~~~--------------------------------------------------------~~~~~y~~sk~a~ 157 (242)
T TIGR01829 134 NISSVNGQKGQ--------------------------------------------------------FGQTNYSAAKAGM 157 (242)
T ss_pred EEcchhhcCCC--------------------------------------------------------CCcchhHHHHHHH
Confidence 99996432111 1234699999977
Q ss_pred HHHHHHh-----hcCCcEEEEecCccccCCCCCCCcccccccccHHHHHHhhcCCceeeccCCCceeeeeeHHHHHHHHH
Q 010075 239 EMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMI 313 (519)
Q Consensus 239 E~lv~~~-----~~~lp~~IvRPs~V~g~~~~p~~gw~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~d~vpVDdva~aii 313 (519)
+.+++.. ..++++..++|+.+.++...+.+ ...+.....+. ....+...+++++++.
T Consensus 158 ~~~~~~la~~~~~~~i~v~~i~pg~~~t~~~~~~~---------~~~~~~~~~~~---------~~~~~~~~~~~a~~~~ 219 (242)
T TIGR01829 158 IGFTKALAQEGATKGVTVNTISPGYIATDMVMAMR---------EDVLNSIVAQI---------PVGRLGRPEEIAAAVA 219 (242)
T ss_pred HHHHHHHHHHhhhhCeEEEEEeeCCCcCccccccc---------hHHHHHHHhcC---------CCCCCcCHHHHHHHHH
Confidence 7776654 35899999999999876542211 11111111111 1122456689999987
Q ss_pred HHHHHhccCCCCCcEEEecCC
Q 010075 314 VAMVAHAKQPSDANIYHVGSS 334 (519)
Q Consensus 314 ~a~~~~~~~~~~~~iyni~s~ 334 (519)
.++..... .-.++++.+.+|
T Consensus 220 ~l~~~~~~-~~~G~~~~~~gg 239 (242)
T TIGR01829 220 FLASEEAG-YITGATLSINGG 239 (242)
T ss_pred HHcCchhc-CccCCEEEecCC
Confidence 76643221 224678888776
|
(R)-3-hydroxyacyl-CoA + NADP+ = 3-oxoacyl-CoA + NADPH. Members of this family may act in the biosynthesis of poly-beta-hydroxybutyrate (e.g. Rhizobium meliloti) and related poly-beta-hydroxyalkanoates. Note that the member of this family from Azospirillum brasilense, designated NodG, appears to lack acetoacetyl-CoA reductase activity and to act instead in the production of nodulation factor. This family is downgraded to subfamily for this NodG. Other proteins designated NodG, as from Rhizobium, belong to related but distinct protein families. |
| >PRK08945 putative oxoacyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.55 E-value=1.7e-13 Score=134.12 Aligned_cols=173 Identities=18% Similarity=0.174 Sum_probs=118.6
Q ss_pred hhhcCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCc
Q 010075 7 VEFLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEK 86 (519)
Q Consensus 7 ~~~~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~ 86 (519)
.+.+++|+|+||||+|+||.++++.|++.| .+|+++.|+... .+++.+ .+++.. ..+
T Consensus 7 ~~~~~~k~vlItG~~g~iG~~la~~l~~~G---~~Vi~~~r~~~~---~~~~~~---------~l~~~~--------~~~ 63 (247)
T PRK08945 7 PDLLKDRIILVTGAGDGIGREAALTYARHG---ATVILLGRTEEK---LEAVYD---------EIEAAG--------GPQ 63 (247)
T ss_pred ccccCCCEEEEeCCCchHHHHHHHHHHHCC---CcEEEEeCCHHH---HHHHHH---------HHHhcC--------CCC
Confidence 456789999999999999999999999987 578888887421 122221 111111 245
Q ss_pred eEEEeccCCCCCCCCChhhh------HHHHhcCccEEEEcCccCCc--------cccHHHHHHHhHHHHHHHHHHHHhc-
Q 010075 87 ITFVPGDISSEDLGLKDSNL------KEELWNELDIMVNSAAITKF--------DERYDVAFGINTLGVIHLVNFAKKC- 151 (519)
Q Consensus 87 v~~v~gDl~~~~lgls~~~~------~~~l~~~vdiViH~Aa~v~f--------~~~~~~~~~~Nv~gt~~ll~~a~~~- 151 (519)
+.++.+|++..+ ..+. ......++|+|||+|+.... .+.++..+++|+.|+.++++.+...
T Consensus 64 ~~~~~~d~~~~~----~~~~~~~~~~~~~~~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~l 139 (247)
T PRK08945 64 PAIIPLDLLTAT----PQNYQQLADTIEEQFGRLDGVLHNAGLLGELGPMEQQDPEVWQDVMQVNVNATFMLTQALLPLL 139 (247)
T ss_pred ceEEEecccCCC----HHHHHHHHHHHHHHhCCCCEEEECCcccCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHH
Confidence 677888886321 1111 11223469999999987432 2456788999999998888876431
Q ss_pred --cCCceEEEEecceeecCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCc
Q 010075 152 --VKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPN 229 (519)
Q Consensus 152 --~~l~~~V~vSTa~v~~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n 229 (519)
.+.++||++||....... ....
T Consensus 140 ~~~~~~~iv~~ss~~~~~~~--------------------------------------------------------~~~~ 163 (247)
T PRK08945 140 LKSPAASLVFTSSSVGRQGR--------------------------------------------------------ANWG 163 (247)
T ss_pred HhCCCCEEEEEccHhhcCCC--------------------------------------------------------CCCc
Confidence 256789999997433210 1234
Q ss_pred HHHHHHHHHHHHHHHh-----hcCCcEEEEecCccccC
Q 010075 230 TYVFTKTMGEMLMQQS-----KENLSLVIIRPTVVSGT 262 (519)
Q Consensus 230 ~Y~~sK~~aE~lv~~~-----~~~lp~~IvRPs~V~g~ 262 (519)
.|+.||+..|.+++.. ..++++.+++|+.+-++
T Consensus 164 ~Y~~sK~a~~~~~~~~~~~~~~~~i~~~~v~pg~v~t~ 201 (247)
T PRK08945 164 AYAVSKFATEGMMQVLADEYQGTNLRVNCINPGGTRTA 201 (247)
T ss_pred ccHHHHHHHHHHHHHHHHHhcccCEEEEEEecCCccCc
Confidence 6999999999988765 34688999999988665
|
|
| >PRK06949 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.55 E-value=1.4e-13 Score=135.38 Aligned_cols=168 Identities=15% Similarity=0.210 Sum_probs=119.6
Q ss_pred cCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 010075 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (519)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (519)
+++|+|+||||+|+||+++++.|++.| .+|+++.|+... .+.+.+ .++.. ..++.+
T Consensus 7 ~~~k~ilItGasg~IG~~~a~~l~~~G---~~Vi~~~r~~~~---~~~~~~---------~l~~~---------~~~~~~ 62 (258)
T PRK06949 7 LEGKVALVTGASSGLGARFAQVLAQAG---AKVVLASRRVER---LKELRA---------EIEAE---------GGAAHV 62 (258)
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCC---CEEEEEeCCHHH---HHHHHH---------HHHhc---------CCcEEE
Confidence 678999999999999999999999987 578999887432 111211 11111 246789
Q ss_pred EeccCCCCCCCCChhhhHHHHh-------cCccEEEEcCccCCc-------cccHHHHHHHhHHHHHHHHHHHHhc---c
Q 010075 90 VPGDISSEDLGLKDSNLKEELW-------NELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKC---V 152 (519)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~-------~~vdiViH~Aa~v~f-------~~~~~~~~~~Nv~gt~~ll~~a~~~---~ 152 (519)
+.+|++++ ++ ...+. .++|+|||+|+.... .+.++..+++|+.|+..+++.+... .
T Consensus 63 ~~~D~~~~------~~-~~~~~~~~~~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~ 135 (258)
T PRK06949 63 VSLDVTDY------QS-IKAAVAHAETEAGTIDILVNNSGVSTTQKLVDVTPADFDFVFDTNTRGAFFVAQEVAKRMIAR 135 (258)
T ss_pred EEecCCCH------HH-HHHHHHHHHHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhcchhhHHHHHHHHHHHHhc
Confidence 99999963 22 22332 368999999996432 2456778999999999998876531 1
Q ss_pred C--------CceEEEEecceeecCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhcccccccc
Q 010075 153 K--------LKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKL 224 (519)
Q Consensus 153 ~--------l~~~V~vSTa~v~~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~ 224 (519)
. ..++|++||.......
T Consensus 136 ~~~~~~~~~~g~iv~~sS~~~~~~~------------------------------------------------------- 160 (258)
T PRK06949 136 AKGAGNTKPGGRIINIASVAGLRVL------------------------------------------------------- 160 (258)
T ss_pred CCcCCCCCCCeEEEEECcccccCCC-------------------------------------------------------
Confidence 1 2589999987654211
Q ss_pred CCCCcHHHHHHHHHHHHHHHh-----hcCCcEEEEecCccccCCC
Q 010075 225 HGWPNTYVFTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYK 264 (519)
Q Consensus 225 ~~~~n~Y~~sK~~aE~lv~~~-----~~~lp~~IvRPs~V~g~~~ 264 (519)
.....|+.+|+..|.+++.+ ..++++++++||.|.++..
T Consensus 161 -~~~~~Y~~sK~a~~~~~~~la~~~~~~~i~v~~v~pG~v~t~~~ 204 (258)
T PRK06949 161 -PQIGLYCMSKAAVVHMTRAMALEWGRHGINVNAICPGYIDTEIN 204 (258)
T ss_pred -CCccHHHHHHHHHHHHHHHHHHHHHhcCeEEEEEeeCCCcCCcc
Confidence 22457999999999888765 3479999999999988654
|
|
| >PRK07041 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.55 E-value=2.8e-13 Score=130.99 Aligned_cols=214 Identities=14% Similarity=0.068 Sum_probs=139.1
Q ss_pred EEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEEeccCC
Q 010075 16 LVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVPGDIS 95 (519)
Q Consensus 16 lITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v~gDl~ 95 (519)
+||||||+||+.++++|++.| .+|+++.|+... .+.+.+ .+++ ..+++++.+|++
T Consensus 1 lItGas~~iG~~~a~~l~~~G---~~v~~~~r~~~~---~~~~~~---------~~~~----------~~~~~~~~~Dl~ 55 (230)
T PRK07041 1 LVVGGSSGIGLALARAFAAEG---ARVTIASRSRDR---LAAAAR---------ALGG----------GAPVRTAALDIT 55 (230)
T ss_pred CeecCCChHHHHHHHHHHHCC---CEEEEEeCCHHH---HHHHHH---------HHhc----------CCceEEEEccCC
Confidence 699999999999999999988 578888886321 111110 0100 246788999999
Q ss_pred CCCCCCChhhhHHHHhc---CccEEEEcCccCCc-------cccHHHHHHHhHHHHHHHHHHHHhccCCceEEEEeccee
Q 010075 96 SEDLGLKDSNLKEELWN---ELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAYV 165 (519)
Q Consensus 96 ~~~lgls~~~~~~~l~~---~vdiViH~Aa~v~f-------~~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V~vSTa~v 165 (519)
++ +....+++ ++|++||+|+.... .+.++..+++|+.++..++++.. +.+..++|++||...
T Consensus 56 ~~-------~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~-~~~~g~iv~~ss~~~ 127 (230)
T PRK07041 56 DE-------AAVDAFFAEAGPFDHVVITAADTPGGPVRALPLAAAQAAMDSKFWGAYRVARAAR-IAPGGSLTFVSGFAA 127 (230)
T ss_pred CH-------HHHHHHHHhcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHhhhh-hcCCeEEEEECchhh
Confidence 63 22334443 58999999987432 24577889999999999999544 346689999998866
Q ss_pred ecCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcHHHHHHHHHHHHHHHh
Q 010075 166 AGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLMQQS 245 (519)
Q Consensus 166 ~~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~Y~~sK~~aE~lv~~~ 245 (519)
+... ++.+.|+.+|+..|.+++..
T Consensus 128 ~~~~--------------------------------------------------------~~~~~Y~~sK~a~~~~~~~l 151 (230)
T PRK07041 128 VRPS--------------------------------------------------------ASGVLQGAINAALEALARGL 151 (230)
T ss_pred cCCC--------------------------------------------------------CcchHHHHHHHHHHHHHHHH
Confidence 5321 22457999999999998875
Q ss_pred ---hcCCcEEEEecCccccCCCCCCCcccccccccHHHHHHhhcCCceeeccCCCceeeeeeHHHHHHHHHHHHHHhccC
Q 010075 246 ---KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMIVAMVAHAKQ 322 (519)
Q Consensus 246 ---~~~lp~~IvRPs~V~g~~~~p~~gw~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~d~vpVDdva~aii~a~~~~~~~ 322 (519)
..++.+..+.|+.+-++.....+ . .....++....... +. .-+...+|+|++++.++...
T Consensus 152 a~e~~~irv~~i~pg~~~t~~~~~~~---~--~~~~~~~~~~~~~~----~~-----~~~~~~~dva~~~~~l~~~~--- 214 (230)
T PRK07041 152 ALELAPVRVNTVSPGLVDTPLWSKLA---G--DAREAMFAAAAERL----PA-----RRVGQPEDVANAILFLAANG--- 214 (230)
T ss_pred HHHhhCceEEEEeecccccHHHHhhh---c--cchHHHHHHHHhcC----CC-----CCCcCHHHHHHHHHHHhcCC---
Confidence 23478999999887654321110 0 00111221111111 10 01235689999999988632
Q ss_pred CCCCcEEEecCCC
Q 010075 323 PSDANIYHVGSSL 335 (519)
Q Consensus 323 ~~~~~iyni~s~~ 335 (519)
...+++|++.+|.
T Consensus 215 ~~~G~~~~v~gg~ 227 (230)
T PRK07041 215 FTTGSTVLVDGGH 227 (230)
T ss_pred CcCCcEEEeCCCe
Confidence 1236789988773
|
|
| >PRK08267 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.54 E-value=1.5e-13 Score=135.58 Aligned_cols=162 Identities=15% Similarity=0.095 Sum_probs=116.5
Q ss_pred CEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEEec
Q 010075 13 KTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVPG 92 (519)
Q Consensus 13 k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v~g 92 (519)
|+++||||||+||+.+++.|++.| .+|+++.|+... .+.+.+ +.+ ..++.++.+
T Consensus 2 k~vlItGasg~iG~~la~~l~~~G---~~V~~~~r~~~~---~~~~~~-------------~~~-------~~~~~~~~~ 55 (260)
T PRK08267 2 KSIFITGAASGIGRATALLFAAEG---WRVGAYDINEAG---LAALAA-------------ELG-------AGNAWTGAL 55 (260)
T ss_pred cEEEEeCCCchHHHHHHHHHHHCC---CeEEEEeCCHHH---HHHHHH-------------Hhc-------CCceEEEEe
Confidence 689999999999999999999988 578888886532 222211 100 246889999
Q ss_pred cCCCCCCCCChhhhHHHH--------hcCccEEEEcCccCCc-------cccHHHHHHHhHHHHHHHHHHHHhc---cCC
Q 010075 93 DISSEDLGLKDSNLKEEL--------WNELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKC---VKL 154 (519)
Q Consensus 93 Dl~~~~lgls~~~~~~~l--------~~~vdiViH~Aa~v~f-------~~~~~~~~~~Nv~gt~~ll~~a~~~---~~l 154 (519)
|+++++ + ...+ ..++|+|||+||.... .+.++..+++|+.|+..+++.+.+. .+.
T Consensus 56 D~~~~~------~-v~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~ 128 (260)
T PRK08267 56 DVTDRA------A-WDAALADFAAATGGRLDVLFNNAGILRGGPFEDIPLEAHDRVIDINVKGVLNGAHAALPYLKATPG 128 (260)
T ss_pred cCCCHH------H-HHHHHHHHHHHcCCCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCC
Confidence 999632 2 2222 2368999999997542 1457788999999999998887531 245
Q ss_pred ceEEEEecceeecCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcHHHHH
Q 010075 155 KVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFT 234 (519)
Q Consensus 155 ~~~V~vSTa~v~~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~Y~~s 234 (519)
.++|++||....... .....|+.|
T Consensus 129 ~~iv~isS~~~~~~~--------------------------------------------------------~~~~~Y~~s 152 (260)
T PRK08267 129 ARVINTSSASAIYGQ--------------------------------------------------------PGLAVYSAT 152 (260)
T ss_pred CEEEEeCchhhCcCC--------------------------------------------------------CCchhhHHH
Confidence 789999997443211 113569999
Q ss_pred HHHHHHHHHHh-----hcCCcEEEEecCccccCC
Q 010075 235 KTMGEMLMQQS-----KENLSLVIIRPTVVSGTY 263 (519)
Q Consensus 235 K~~aE~lv~~~-----~~~lp~~IvRPs~V~g~~ 263 (519)
|+..+.+.+.. ..++++.+++|+.+....
T Consensus 153 Kaa~~~~~~~l~~~~~~~~i~v~~i~pg~~~t~~ 186 (260)
T PRK08267 153 KFAVRGLTEALDLEWRRHGIRVADVMPLFVDTAM 186 (260)
T ss_pred HHHHHHHHHHHHHHhcccCcEEEEEecCCcCCcc
Confidence 99988887764 347999999999986653
|
|
| >PRK07097 gluconate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.54 E-value=4.4e-13 Score=132.75 Aligned_cols=228 Identities=12% Similarity=0.082 Sum_probs=143.9
Q ss_pred cCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 010075 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (519)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (519)
+.+|+++||||+|+||++++++|++.| .+|+++.|+... .+++.+ .+++ . ..++.+
T Consensus 8 ~~~k~~lItGa~~~iG~~ia~~l~~~G---~~vv~~~~~~~~---~~~~~~---------~~~~-~--------~~~~~~ 63 (265)
T PRK07097 8 LKGKIALITGASYGIGFAIAKAYAKAG---ATIVFNDINQEL---VDKGLA---------AYRE-L--------GIEAHG 63 (265)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCC---CeEEEEeCCHHH---HHHHHH---------HHHh-c--------CCceEE
Confidence 468999999999999999999999988 567888776422 112111 1111 0 246889
Q ss_pred EeccCCCCCCCCChhhhHHHHh-------cCccEEEEcCccCCc-------cccHHHHHHHhHHHHHHHHHHHHh-c--c
Q 010075 90 VPGDISSEDLGLKDSNLKEELW-------NELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKK-C--V 152 (519)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~-------~~vdiViH~Aa~v~f-------~~~~~~~~~~Nv~gt~~ll~~a~~-~--~ 152 (519)
+.+|++++ +..+.++ ..+|+|||+||.... .+.++..+++|+.|+..+.+.+.. + .
T Consensus 64 ~~~Dl~~~-------~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~ 136 (265)
T PRK07097 64 YVCDVTDE-------DGVQAMVSQIEKEVGVIDILVNNAGIIKRIPMLEMSAEDFRQVIDIDLNAPFIVSKAVIPSMIKK 136 (265)
T ss_pred EEcCCCCH-------HHHHHHHHHHHHhCCCCCEEEECCCCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhc
Confidence 99999963 2222332 358999999998542 245677789999999988777643 1 2
Q ss_pred CCceEEEEecceeecCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcHHH
Q 010075 153 KLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYV 232 (519)
Q Consensus 153 ~l~~~V~vSTa~v~~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~Y~ 232 (519)
+..++|++||....... .....|+
T Consensus 137 ~~g~iv~isS~~~~~~~--------------------------------------------------------~~~~~Y~ 160 (265)
T PRK07097 137 GHGKIINICSMMSELGR--------------------------------------------------------ETVSAYA 160 (265)
T ss_pred CCcEEEEEcCccccCCC--------------------------------------------------------CCCccHH
Confidence 45789999986432110 1235699
Q ss_pred HHHHHHHHHHHHh-----hcCCcEEEEecCccccCCCCCCCcccccccccHHHHHHhhcCCceeeccCCCceeeeeeHHH
Q 010075 233 FTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDM 307 (519)
Q Consensus 233 ~sK~~aE~lv~~~-----~~~lp~~IvRPs~V~g~~~~p~~gw~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~d~vpVDd 307 (519)
.+|+..+.+++.+ ..++.+..++||.|.++...+...-... .....+....... . ....+...+|
T Consensus 161 ~sKaal~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~-~~~~~~~~~~~~~-------~--~~~~~~~~~d 230 (265)
T PRK07097 161 AAKGGLKMLTKNIASEYGEANIQCNGIGPGYIATPQTAPLRELQAD-GSRHPFDQFIIAK-------T--PAARWGDPED 230 (265)
T ss_pred HHHHHHHHHHHHHHHHhhhcCceEEEEEeccccccchhhhhhcccc-ccchhHHHHHHhc-------C--CccCCcCHHH
Confidence 9999999988865 3479999999999987754322110000 0000010000000 0 0112456789
Q ss_pred HHHHHHHHHHHhccCCCCCcEEEecCCC
Q 010075 308 VVNAMIVAMVAHAKQPSDANIYHVGSSL 335 (519)
Q Consensus 308 va~aii~a~~~~~~~~~~~~iyni~s~~ 335 (519)
+|++++.++.... ..-.+.++++.+|.
T Consensus 231 va~~~~~l~~~~~-~~~~g~~~~~~gg~ 257 (265)
T PRK07097 231 LAGPAVFLASDAS-NFVNGHILYVDGGI 257 (265)
T ss_pred HHHHHHHHhCccc-CCCCCCEEEECCCc
Confidence 9999999886422 12235677777663
|
|
| >PRK08643 acetoin reductase; Validated | Back alignment and domain information |
|---|
Probab=99.54 E-value=1.8e-13 Score=134.55 Aligned_cols=231 Identities=15% Similarity=0.122 Sum_probs=139.5
Q ss_pred CCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEEe
Q 010075 12 NKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVP 91 (519)
Q Consensus 12 ~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v~ 91 (519)
+|+++||||+|+||+++++.|++.| .+|+++.|+... .+++..++ .. ...++.++.
T Consensus 2 ~k~~lItGas~giG~~la~~l~~~G---~~v~~~~r~~~~---~~~~~~~~---------~~---------~~~~~~~~~ 57 (256)
T PRK08643 2 SKVALVTGAGQGIGFAIAKRLVEDG---FKVAIVDYNEET---AQAAADKL---------SK---------DGGKAIAVK 57 (256)
T ss_pred CCEEEEECCCChHHHHHHHHHHHCC---CEEEEEeCCHHH---HHHHHHHH---------Hh---------cCCeEEEEE
Confidence 6899999999999999999999988 578888886432 22222111 10 024678899
Q ss_pred ccCCCCCCCCChhhhHHH---HhcCccEEEEcCccCCc-------cccHHHHHHHhHHHHHHHHHHHHhc----cCCceE
Q 010075 92 GDISSEDLGLKDSNLKEE---LWNELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKC----VKLKVF 157 (519)
Q Consensus 92 gDl~~~~lgls~~~~~~~---l~~~vdiViH~Aa~v~f-------~~~~~~~~~~Nv~gt~~ll~~a~~~----~~l~~~ 157 (519)
+|+++++-- .+..+. ...++|+|||+|+.... .+.++..+++|+.|+..+++.+... +...++
T Consensus 58 ~Dl~~~~~~---~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~i 134 (256)
T PRK08643 58 ADVSDRDQV---FAAVRQVVDTFGDLNVVVNNAGVAPTTPIETITEEQFDKVYNINVGGVIWGIQAAQEAFKKLGHGGKI 134 (256)
T ss_pred CCCCCHHHH---HHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCEE
Confidence 999964210 011111 12469999999987432 2456778999999998877776532 123579
Q ss_pred EEEecceeecCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcHHHHHHHH
Q 010075 158 VHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTM 237 (519)
Q Consensus 158 V~vSTa~v~~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~Y~~sK~~ 237 (519)
|++||....... .....|+.+|+.
T Consensus 135 v~~sS~~~~~~~--------------------------------------------------------~~~~~Y~~sK~a 158 (256)
T PRK08643 135 INATSQAGVVGN--------------------------------------------------------PELAVYSSTKFA 158 (256)
T ss_pred EEECccccccCC--------------------------------------------------------CCCchhHHHHHH
Confidence 999986432110 113469999998
Q ss_pred HHHHHHHh-----hcCCcEEEEecCccccCCCCCCC-cccccccccHHHHHHhhcCCceeeccCCCceeeeeeHHHHHHH
Q 010075 238 GEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFP-GWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNA 311 (519)
Q Consensus 238 aE~lv~~~-----~~~lp~~IvRPs~V~g~~~~p~~-gw~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~d~vpVDdva~a 311 (519)
.+.+++.. ..++.++.++||.|.++...... ...++...+.......... .. ....+...+++|++
T Consensus 159 ~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~-----~~~~~~~~~~va~~ 230 (256)
T PRK08643 159 VRGLTQTAARDLASEGITVNAYAPGIVKTPMMFDIAHQVGENAGKPDEWGMEQFAK---DI-----TLGRLSEPEDVANC 230 (256)
T ss_pred HHHHHHHHHHHhcccCcEEEEEeeCCCcChhhhHHHhhhccccCCCchHHHHHHhc---cC-----CCCCCcCHHHHHHH
Confidence 88777654 35799999999999775421100 0000000000000000000 00 11124578999999
Q ss_pred HHHHHHHhccCCCCCcEEEecCC
Q 010075 312 MIVAMVAHAKQPSDANIYHVGSS 334 (519)
Q Consensus 312 ii~a~~~~~~~~~~~~iyni~s~ 334 (519)
+..++..... .-.+.++.+.+|
T Consensus 231 ~~~L~~~~~~-~~~G~~i~vdgg 252 (256)
T PRK08643 231 VSFLAGPDSD-YITGQTIIVDGG 252 (256)
T ss_pred HHHHhCcccc-CccCcEEEeCCC
Confidence 9888754322 223677777665
|
|
| >TIGR02415 23BDH acetoin reductases | Back alignment and domain information |
|---|
Probab=99.54 E-value=1.8e-13 Score=134.27 Aligned_cols=225 Identities=14% Similarity=0.105 Sum_probs=137.2
Q ss_pred CEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEEec
Q 010075 13 KTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVPG 92 (519)
Q Consensus 13 k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v~g 92 (519)
|+++||||+|+||+++++.|++.| .+|+++.|+... .+.+.++ ++. ...++.++.+
T Consensus 1 k~~lItG~sg~iG~~la~~l~~~G---~~v~~~~r~~~~---~~~~~~~---------l~~---------~~~~~~~~~~ 56 (254)
T TIGR02415 1 KVALVTGGAQGIGKGIAERLAKDG---FAVAVADLNEET---AKETAKE---------INQ---------AGGKAVAYKL 56 (254)
T ss_pred CEEEEeCCCchHHHHHHHHHHHCC---CEEEEEeCCHHH---HHHHHHH---------HHh---------cCCeEEEEEc
Confidence 589999999999999999999988 578888886321 1111111 111 0246889999
Q ss_pred cCCCCCCCCChhhhHHHH-------hcCccEEEEcCccCCc-------cccHHHHHHHhHHHHHHHHHHHHh----ccCC
Q 010075 93 DISSEDLGLKDSNLKEEL-------WNELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKK----CVKL 154 (519)
Q Consensus 93 Dl~~~~lgls~~~~~~~l-------~~~vdiViH~Aa~v~f-------~~~~~~~~~~Nv~gt~~ll~~a~~----~~~l 154 (519)
|++++ +....+ ...+|+|||+|+.... .+.++..+++|+.++..+++.+.+ .+..
T Consensus 57 Dl~~~-------~~i~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~ 129 (254)
T TIGR02415 57 DVSDK-------DQVFSAIDQAAEKFGGFDVMVNNAGVAPITPILEITEEELKKVYNVNVKGVLFGIQAAARQFKKQGHG 129 (254)
T ss_pred CCCCH-------HHHHHHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCC
Confidence 99963 222222 2368999999997532 145667899999999888776643 2223
Q ss_pred ceEEEEecceeecCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcHHHHH
Q 010075 155 KVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFT 234 (519)
Q Consensus 155 ~~~V~vSTa~v~~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~Y~~s 234 (519)
.++|++||....... +....|+.+
T Consensus 130 ~~iv~~sS~~~~~~~--------------------------------------------------------~~~~~Y~~s 153 (254)
T TIGR02415 130 GKIINAASIAGHEGN--------------------------------------------------------PILSAYSST 153 (254)
T ss_pred eEEEEecchhhcCCC--------------------------------------------------------CCCcchHHH
Confidence 689999986443211 123569999
Q ss_pred HHHHHHHHHHh-----hcCCcEEEEecCccccCCCCCCCcccccccc-c-HHHHHHhhcCCceeeccCCCceeeeeeHHH
Q 010075 235 KTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKT-I-NTLFVASAQGNLRCLVGETKVIMDVIPVDM 307 (519)
Q Consensus 235 K~~aE~lv~~~-----~~~lp~~IvRPs~V~g~~~~p~~gw~~~~~~-~-~~~i~~~~~g~~~~~~~~~~~~~d~vpVDd 307 (519)
|+..|.+++.. ..++.+.+++|+.+..+..+........... + ........ .......+..++|
T Consensus 154 K~a~~~~~~~l~~~~~~~~i~v~~v~Pg~i~t~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~ 224 (254)
T TIGR02415 154 KFAVRGLTQTAAQELAPKGITVNAYCPGIVKTPMWEEIDEETSEIAGKPIGEGFEEFS---------SEIALGRPSEPED 224 (254)
T ss_pred HHHHHHHHHHHHHHhcccCeEEEEEecCcccChhhhhhhhhhhhcccCchHHHHHHHH---------hhCCCCCCCCHHH
Confidence 99999888754 3479999999998865532111110000000 0 00000000 0001123678899
Q ss_pred HHHHHHHHHHHhccCCCCCcEEEecCC
Q 010075 308 VVNAMIVAMVAHAKQPSDANIYHVGSS 334 (519)
Q Consensus 308 va~aii~a~~~~~~~~~~~~iyni~s~ 334 (519)
+++++..++..... ...+.++.+.+|
T Consensus 225 ~a~~~~~l~~~~~~-~~~g~~~~~d~g 250 (254)
T TIGR02415 225 VAGLVSFLASEDSD-YITGQSILVDGG 250 (254)
T ss_pred HHHHHHhhcccccC-CccCcEEEecCC
Confidence 99999988864322 112455555443
|
One member of this family, as characterized in Klebsiella terrigena, is described as able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also called capable of irreversible reduction of diacetyl with NADH to acetoin. Blomqvist, et al. decline to specify either EC 1.1.1.4 which is (R,R)-butanediol dehydrogenase, or EC 1.1.1.5, which is acetoin dehydrogenase without a specified stereochemistry, for this enzyme. This enzyme is a homotetramer in the family of short chain dehydrogenases (pfam00106). Another member of this family, from Corynebacterium glutamicum, is called L-2,3-butanediol dehydrogenase (PubMed:11577733). |
| >PRK07904 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.54 E-value=5.8e-13 Score=131.19 Aligned_cols=198 Identities=13% Similarity=0.097 Sum_probs=128.7
Q ss_pred CCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEE
Q 010075 11 ENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFV 90 (519)
Q Consensus 11 ~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v 90 (519)
++++|+||||||+||++++++|++.|. .+|+++.|+.... .+.+.+++ ++. ...+++++
T Consensus 7 ~~~~vlItGas~giG~~la~~l~~~gg--~~V~~~~r~~~~~--~~~~~~~l---------~~~--------~~~~v~~~ 65 (253)
T PRK07904 7 NPQTILLLGGTSEIGLAICERYLKNAP--ARVVLAALPDDPR--RDAAVAQM---------KAA--------GASSVEVI 65 (253)
T ss_pred CCcEEEEEcCCcHHHHHHHHHHHhcCC--CeEEEEeCCcchh--HHHHHHHH---------Hhc--------CCCceEEE
Confidence 578999999999999999999999852 4788888876421 12221111 110 02368899
Q ss_pred eccCCCCCCCCChhhhHHHHh--cCccEEEEcCccCCcc----cc---HHHHHHHhHHHHHHH----HHHHHhccCCceE
Q 010075 91 PGDISSEDLGLKDSNLKEELW--NELDIMVNSAAITKFD----ER---YDVAFGINTLGVIHL----VNFAKKCVKLKVF 157 (519)
Q Consensus 91 ~gDl~~~~lgls~~~~~~~l~--~~vdiViH~Aa~v~f~----~~---~~~~~~~Nv~gt~~l----l~~a~~~~~l~~~ 157 (519)
.+|+++++- -.+..+.+. .++|++||+||..... .+ ..+.+++|+.|+..+ ++++++. +..++
T Consensus 66 ~~D~~~~~~---~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~l~~~~~~~-~~~~i 141 (253)
T PRK07904 66 DFDALDTDS---HPKVIDAAFAGGDVDVAIVAFGLLGDAEELWQNQRKAVQIAEINYTAAVSVGVLLGEKMRAQ-GFGQI 141 (253)
T ss_pred EecCCChHH---HHHHHHHHHhcCCCCEEEEeeecCCchhhcccCHHHHHHHHHHHhHhHHHHHHHHHHHHHhc-CCceE
Confidence 999996421 011122222 3799999999875321 11 224589999988764 5555553 56899
Q ss_pred EEEecceeecCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcHHHHHHHH
Q 010075 158 VHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTM 237 (519)
Q Consensus 158 V~vSTa~v~~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~Y~~sK~~ 237 (519)
|++||....... .....|+.||+.
T Consensus 142 v~isS~~g~~~~--------------------------------------------------------~~~~~Y~~sKaa 165 (253)
T PRK07904 142 IAMSSVAGERVR--------------------------------------------------------RSNFVYGSTKAG 165 (253)
T ss_pred EEEechhhcCCC--------------------------------------------------------CCCcchHHHHHH
Confidence 999997532110 112359999998
Q ss_pred HHHHHHHh-----hcCCcEEEEecCccccCCCCCCCcccccccccHHHHHHhhcCCceeeccCCCceeeeeeHHHHHHHH
Q 010075 238 GEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAM 312 (519)
Q Consensus 238 aE~lv~~~-----~~~lp~~IvRPs~V~g~~~~p~~gw~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~d~vpVDdva~ai 312 (519)
.+.+.+.. ..++++++++||.|..+..... . .. .-.++.+++|+.+
T Consensus 166 ~~~~~~~l~~el~~~~i~v~~v~Pg~v~t~~~~~~-------------------~------~~----~~~~~~~~~A~~i 216 (253)
T PRK07904 166 LDGFYLGLGEALREYGVRVLVVRPGQVRTRMSAHA-------------------K------EA----PLTVDKEDVAKLA 216 (253)
T ss_pred HHHHHHHHHHHHhhcCCEEEEEeeCceecchhccC-------------------C------CC----CCCCCHHHHHHHH
Confidence 88665543 4579999999999876432100 0 00 0136889999999
Q ss_pred HHHHHH
Q 010075 313 IVAMVA 318 (519)
Q Consensus 313 i~a~~~ 318 (519)
+.++.+
T Consensus 217 ~~~~~~ 222 (253)
T PRK07904 217 VTAVAK 222 (253)
T ss_pred HHHHHc
Confidence 998863
|
|
| >PRK09072 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.54 E-value=8.1e-13 Score=130.62 Aligned_cols=197 Identities=15% Similarity=0.200 Sum_probs=131.7
Q ss_pred CCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEE
Q 010075 11 ENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFV 90 (519)
Q Consensus 11 ~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v 90 (519)
++++|+||||+|+||+.+++.|++.| .+|+++.|+... .+.+.++ + + ...++.++
T Consensus 4 ~~~~vlItG~s~~iG~~ia~~l~~~G---~~V~~~~r~~~~---~~~~~~~---------~--~--------~~~~~~~~ 58 (263)
T PRK09072 4 KDKRVLLTGASGGIGQALAEALAAAG---ARLLLVGRNAEK---LEALAAR---------L--P--------YPGRHRWV 58 (263)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCC---CEEEEEECCHHH---HHHHHHH---------H--h--------cCCceEEE
Confidence 57999999999999999999999998 578999886421 1111111 1 0 12578899
Q ss_pred eccCCCCCCCCChhhhHHHH------hcCccEEEEcCccCCcc-------ccHHHHHHHhHHHHHHHHHHHHhc---cCC
Q 010075 91 PGDISSEDLGLKDSNLKEEL------WNELDIMVNSAAITKFD-------ERYDVAFGINTLGVIHLVNFAKKC---VKL 154 (519)
Q Consensus 91 ~gDl~~~~lgls~~~~~~~l------~~~vdiViH~Aa~v~f~-------~~~~~~~~~Nv~gt~~ll~~a~~~---~~l 154 (519)
.+|++++. ..+.+ ...+|+|||+||...+. +.+...+++|+.|+.++++.+.+. ++.
T Consensus 59 ~~D~~d~~-------~~~~~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~ 131 (263)
T PRK09072 59 VADLTSEA-------GREAVLARAREMGGINVLINNAGVNHFALLEDQDPEAIERLLALNLTAPMQLTRALLPLLRAQPS 131 (263)
T ss_pred EccCCCHH-------HHHHHHHHHHhcCCCCEEEECCCCCCccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCC
Confidence 99999642 22222 24689999999976431 356677899999999999887542 234
Q ss_pred ceEEEEecceeecCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcHHHHH
Q 010075 155 KVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFT 234 (519)
Q Consensus 155 ~~~V~vSTa~v~~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~Y~~s 234 (519)
.++|++||....... .....|+.+
T Consensus 132 ~~iv~isS~~~~~~~--------------------------------------------------------~~~~~Y~~s 155 (263)
T PRK09072 132 AMVVNVGSTFGSIGY--------------------------------------------------------PGYASYCAS 155 (263)
T ss_pred CEEEEecChhhCcCC--------------------------------------------------------CCccHHHHH
Confidence 678888886432211 113469999
Q ss_pred HHHHHHHHHHh-----hcCCcEEEEecCccccCCCCCCCcccccccccHHHHHHhhcCCceeeccCCCceeeeeeHHHHH
Q 010075 235 KTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVV 309 (519)
Q Consensus 235 K~~aE~lv~~~-----~~~lp~~IvRPs~V~g~~~~p~~gw~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~d~vpVDdva 309 (519)
|+..+.+++.. ..++.++.+.||.+.++...+...+. .. . .......++++|
T Consensus 156 K~a~~~~~~~l~~~~~~~~i~v~~v~Pg~~~t~~~~~~~~~~--------------~~---~------~~~~~~~~~~va 212 (263)
T PRK09072 156 KFALRGFSEALRRELADTGVRVLYLAPRATRTAMNSEAVQAL--------------NR---A------LGNAMDDPEDVA 212 (263)
T ss_pred HHHHHHHHHHHHHHhcccCcEEEEEecCcccccchhhhcccc--------------cc---c------ccCCCCCHHHHH
Confidence 99877776544 34688999999987654321110000 00 0 011356789999
Q ss_pred HHHHHHHHH
Q 010075 310 NAMIVAMVA 318 (519)
Q Consensus 310 ~aii~a~~~ 318 (519)
++++.++..
T Consensus 213 ~~i~~~~~~ 221 (263)
T PRK09072 213 AAVLQAIEK 221 (263)
T ss_pred HHHHHHHhC
Confidence 999999864
|
|
| >PRK08416 7-alpha-hydroxysteroid dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.53 E-value=2.1e-13 Score=134.75 Aligned_cols=232 Identities=12% Similarity=0.077 Sum_probs=138.3
Q ss_pred hhcCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCce
Q 010075 8 EFLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKI 87 (519)
Q Consensus 8 ~~~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v 87 (519)
..++||+|+||||+|+||++++++|++.| .+|++..|+... ..+.+.+ .++... ..++
T Consensus 4 ~~l~~k~vlItGas~gIG~~ia~~l~~~G---~~v~~~~~~~~~--~~~~~~~---------~~~~~~--------~~~~ 61 (260)
T PRK08416 4 NEMKGKTLVISGGTRGIGKAIVYEFAQSG---VNIAFTYNSNVE--EANKIAE---------DLEQKY--------GIKA 61 (260)
T ss_pred cccCCCEEEEeCCCchHHHHHHHHHHHCC---CEEEEEcCCCHH--HHHHHHH---------HHHHhc--------CCce
Confidence 44789999999999999999999999998 566766654321 1111111 111111 2468
Q ss_pred EEEeccCCCCCCCCChhhhHHHHhcCccEEEEcCccCC---------c----cccHHHHHHHhHHHHHHHHHHHHh-c--
Q 010075 88 TFVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITK---------F----DERYDVAFGINTLGVIHLVNFAKK-C-- 151 (519)
Q Consensus 88 ~~v~gDl~~~~lgls~~~~~~~l~~~vdiViH~Aa~v~---------f----~~~~~~~~~~Nv~gt~~ll~~a~~-~-- 151 (519)
.++.+|+++++.-....+.......++|++||+|+... + .+.+...+++|+.+...+.+.+.. +
T Consensus 62 ~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~ 141 (260)
T PRK08416 62 KAYPLNILEPETYKELFKKIDEDFDRVDFFISNAIISGRAVVGGYTKFMRLKPKGLNNIYTATVNAFVVGAQEAAKRMEK 141 (260)
T ss_pred EEEEcCCCCHHHHHHHHHHHHHhcCCccEEEECccccccccccccCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHhhhc
Confidence 89999999642110000111111246899999997531 1 134566788898887766555432 2
Q ss_pred cCCceEEEEecceeecCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcHH
Q 010075 152 VKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTY 231 (519)
Q Consensus 152 ~~l~~~V~vSTa~v~~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~Y 231 (519)
.+..++|++||....... +....|
T Consensus 142 ~~~g~iv~isS~~~~~~~--------------------------------------------------------~~~~~Y 165 (260)
T PRK08416 142 VGGGSIISLSSTGNLVYI--------------------------------------------------------ENYAGH 165 (260)
T ss_pred cCCEEEEEEeccccccCC--------------------------------------------------------CCcccc
Confidence 134689999996432110 113469
Q ss_pred HHHHHHHHHHHHHh-----hcCCcEEEEecCccccCCCCCCCcccccccccHHHHHHhhcCCceeeccCCCceeeeeeHH
Q 010075 232 VFTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVD 306 (519)
Q Consensus 232 ~~sK~~aE~lv~~~-----~~~lp~~IvRPs~V~g~~~~p~~gw~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~d~vpVD 306 (519)
+.||+..+.+++.. ..++.+..+.||.|-.+....+++. ........... ...-+...+
T Consensus 166 ~asK~a~~~~~~~la~el~~~gi~v~~v~PG~i~T~~~~~~~~~-------~~~~~~~~~~~---------~~~r~~~p~ 229 (260)
T PRK08416 166 GTSKAAVETMVKYAATELGEKNIRVNAVSGGPIDTDALKAFTNY-------EEVKAKTEELS---------PLNRMGQPE 229 (260)
T ss_pred hhhHHHHHHHHHHHHHHhhhhCeEEEEEeeCcccChhhhhccCC-------HHHHHHHHhcC---------CCCCCCCHH
Confidence 99999999998765 3479999999998865432221111 11111111110 111256789
Q ss_pred HHHHHHHHHHHHhccCCCCCcEEEecCC
Q 010075 307 MVVNAMIVAMVAHAKQPSDANIYHVGSS 334 (519)
Q Consensus 307 dva~aii~a~~~~~~~~~~~~iyni~s~ 334 (519)
|+|++++.++..... .-.+.++.+.+|
T Consensus 230 ~va~~~~~l~~~~~~-~~~G~~i~vdgg 256 (260)
T PRK08416 230 DLAGACLFLCSEKAS-WLTGQTIVVDGG 256 (260)
T ss_pred HHHHHHHHHcChhhh-cccCcEEEEcCC
Confidence 999999998753322 113567777655
|
|
| >PRK05872 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.53 E-value=4.2e-13 Score=135.30 Aligned_cols=207 Identities=14% Similarity=0.153 Sum_probs=137.2
Q ss_pred cCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 010075 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (519)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (519)
++|++|+||||||+||+.+++.|++.| .+|+++.|+... .+.+. ++.+. ..++..
T Consensus 7 l~gk~vlItGas~gIG~~ia~~l~~~G---~~V~~~~r~~~~---l~~~~-------------~~l~~------~~~~~~ 61 (296)
T PRK05872 7 LAGKVVVVTGAARGIGAELARRLHARG---AKLALVDLEEAE---LAALA-------------AELGG------DDRVLT 61 (296)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCC---CEEEEEeCCHHH---HHHHH-------------HHhcC------CCcEEE
Confidence 578999999999999999999999988 578888886421 12221 11110 135667
Q ss_pred EeccCCCCCCCCChhhhHHHH-------hcCccEEEEcCccCCc-------cccHHHHHHHhHHHHHHHHHHHHhc--cC
Q 010075 90 VPGDISSEDLGLKDSNLKEEL-------WNELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKC--VK 153 (519)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l-------~~~vdiViH~Aa~v~f-------~~~~~~~~~~Nv~gt~~ll~~a~~~--~~ 153 (519)
+.+|+++++ ..+.+ ...+|+|||+||.... .+.++..+++|+.|+.++++.+... ++
T Consensus 62 ~~~Dv~d~~-------~v~~~~~~~~~~~g~id~vI~nAG~~~~~~~~~~~~~~~~~~~~vn~~g~~~l~~~~~~~~~~~ 134 (296)
T PRK05872 62 VVADVTDLA-------AMQAAAEEAVERFGGIDVVVANAGIASGGSVAQVDPDAFRRVIDVNLLGVFHTVRATLPALIER 134 (296)
T ss_pred EEecCCCHH-------HHHHHHHHHHHHcCCCCEEEECCCcCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc
Confidence 789999632 22222 2469999999997542 2456788999999999999887542 23
Q ss_pred CceEEEEecceeecCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcHHHH
Q 010075 154 LKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVF 233 (519)
Q Consensus 154 l~~~V~vSTa~v~~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~Y~~ 233 (519)
..++|++||...+... +....|+.
T Consensus 135 ~g~iv~isS~~~~~~~--------------------------------------------------------~~~~~Y~a 158 (296)
T PRK05872 135 RGYVLQVSSLAAFAAA--------------------------------------------------------PGMAAYCA 158 (296)
T ss_pred CCEEEEEeCHhhcCCC--------------------------------------------------------CCchHHHH
Confidence 3589999997654321 12347999
Q ss_pred HHHHHHHHHHHh-----hcCCcEEEEecCccccCCCCCCCcccccccccHHHHHHhhcCCceeeccCCCceeeeeeHHHH
Q 010075 234 TKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMV 308 (519)
Q Consensus 234 sK~~aE~lv~~~-----~~~lp~~IvRPs~V~g~~~~p~~gw~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~d~vpVDdv 308 (519)
||+..+.+.+.. ..++.+.++.||.|..+....... . .......... .. ......++.+|+
T Consensus 159 sKaal~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~~~~~---~----~~~~~~~~~~-~~------~p~~~~~~~~~v 224 (296)
T PRK05872 159 SKAGVEAFANALRLEVAHHGVTVGSAYLSWIDTDLVRDADA---D----LPAFRELRAR-LP------WPLRRTTSVEKC 224 (296)
T ss_pred HHHHHHHHHHHHHHHHHHHCcEEEEEecCcccchhhhhccc---c----chhHHHHHhh-CC------CcccCCCCHHHH
Confidence 999999888754 457999999999887654321110 0 0111111111 00 012245789999
Q ss_pred HHHHHHHHHH
Q 010075 309 VNAMIVAMVA 318 (519)
Q Consensus 309 a~aii~a~~~ 318 (519)
+++++.++..
T Consensus 225 a~~i~~~~~~ 234 (296)
T PRK05872 225 AAAFVDGIER 234 (296)
T ss_pred HHHHHHHHhc
Confidence 9999998863
|
|
| >TIGR03325 BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase | Back alignment and domain information |
|---|
Probab=99.52 E-value=1.4e-13 Score=136.07 Aligned_cols=169 Identities=16% Similarity=0.204 Sum_probs=116.3
Q ss_pred cCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 010075 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (519)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (519)
+++|+++||||||+||++++++|++.| .+|+++.|+... .+.+. +.. ..++..
T Consensus 3 ~~~k~vlItGas~gIG~~ia~~l~~~G---~~V~~~~r~~~~---~~~l~-------------~~~--------~~~~~~ 55 (262)
T TIGR03325 3 LKGEVVLVTGGASGLGRAIVDRFVAEG---ARVAVLDKSAAG---LQELE-------------AAH--------GDAVVG 55 (262)
T ss_pred cCCcEEEEECCCChHHHHHHHHHHHCC---CEEEEEeCCHHH---HHHHH-------------hhc--------CCceEE
Confidence 468999999999999999999999998 577888876421 11111 111 246788
Q ss_pred EeccCCCCCCCCChhhhHHH---HhcCccEEEEcCccCC----c---c-----ccHHHHHHHhHHHHHHHHHHHHhc--c
Q 010075 90 VPGDISSEDLGLKDSNLKEE---LWNELDIMVNSAAITK----F---D-----ERYDVAFGINTLGVIHLVNFAKKC--V 152 (519)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~---l~~~vdiViH~Aa~v~----f---~-----~~~~~~~~~Nv~gt~~ll~~a~~~--~ 152 (519)
+.+|++++.. ..+..+. ...++|++||+||... + . +.++..+++|+.|+..+++.+.+. +
T Consensus 56 ~~~D~~~~~~---~~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~ 132 (262)
T TIGR03325 56 VEGDVRSLDD---HKEAVARCVAAFGKIDCLIPNAGIWDYSTALVDIPDDRIDEAFDEVFHINVKGYLLAVKAALPALVA 132 (262)
T ss_pred EEeccCCHHH---HHHHHHHHHHHhCCCCEEEECCCCCccCCccccCCchhhhHHHHHhheeecHhHHHHHHHHHHHHhh
Confidence 9999996321 0111111 1246899999998642 1 1 246678999999999999988653 1
Q ss_pred CCceEEEEecceeecCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcHHH
Q 010075 153 KLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYV 232 (519)
Q Consensus 153 ~l~~~V~vSTa~v~~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~Y~ 232 (519)
.-.++|++||....... .....|+
T Consensus 133 ~~g~iv~~sS~~~~~~~--------------------------------------------------------~~~~~Y~ 156 (262)
T TIGR03325 133 SRGSVIFTISNAGFYPN--------------------------------------------------------GGGPLYT 156 (262)
T ss_pred cCCCEEEEeccceecCC--------------------------------------------------------CCCchhH
Confidence 22578888886433110 1134699
Q ss_pred HHHHHHHHHHHHh----hcCCcEEEEecCccccCCC
Q 010075 233 FTKTMGEMLMQQS----KENLSLVIIRPTVVSGTYK 264 (519)
Q Consensus 233 ~sK~~aE~lv~~~----~~~lp~~IvRPs~V~g~~~ 264 (519)
.||+..+.+++.. .+.+.+..+.||.|..+..
T Consensus 157 ~sKaa~~~l~~~la~e~~~~irvn~i~PG~i~t~~~ 192 (262)
T TIGR03325 157 AAKHAVVGLVKELAFELAPYVRVNGVAPGGMSSDLR 192 (262)
T ss_pred HHHHHHHHHHHHHHHhhccCeEEEEEecCCCcCCCc
Confidence 9999999998765 3348899999999876543
|
Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase. |
| >PRK07832 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.52 E-value=1.4e-12 Score=129.67 Aligned_cols=212 Identities=16% Similarity=0.155 Sum_probs=129.2
Q ss_pred CEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEEec
Q 010075 13 KTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVPG 92 (519)
Q Consensus 13 k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v~g 92 (519)
|+++||||||+||.++++.|++.| .+|+++.|+... .+.+.++ ++.. + ...+.++.+
T Consensus 1 k~vlItGas~giG~~la~~la~~G---~~vv~~~r~~~~---~~~~~~~---------~~~~-~-------~~~~~~~~~ 57 (272)
T PRK07832 1 KRCFVTGAASGIGRATALRLAAQG---AELFLTDRDADG---LAQTVAD---------ARAL-G-------GTVPEHRAL 57 (272)
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCC---CEEEEEeCCHHH---HHHHHHH---------HHhc-C-------CCcceEEEe
Confidence 579999999999999999999988 567888876421 1221111 1111 0 133556789
Q ss_pred cCCCCCCCCChhhhHHHHhcCccEEEEcCccCCc-------cccHHHHHHHhHHHHHHHHHHHHh-c---cCCceEEEEe
Q 010075 93 DISSEDLGLKDSNLKEELWNELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKK-C---VKLKVFVHVS 161 (519)
Q Consensus 93 Dl~~~~lgls~~~~~~~l~~~vdiViH~Aa~v~f-------~~~~~~~~~~Nv~gt~~ll~~a~~-~---~~l~~~V~vS 161 (519)
|+++++.-....+.......++|+|||+||.... .+.++..+++|+.|+..+++.+.. + +...++|++|
T Consensus 58 D~~~~~~~~~~~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~g~ii~is 137 (272)
T PRK07832 58 DISDYDAVAAFAADIHAAHGSMDVVMNIAGISAWGTVDRLTHEQWRRMVDVNLMGPIHVIETFVPPMVAAGRGGHLVNVS 137 (272)
T ss_pred eCCCHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEEEEc
Confidence 9996421000001111112458999999987532 245677899999999999998743 1 1236899999
Q ss_pred cceeecCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcHHHHHHHHHHHH
Q 010075 162 TAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEML 241 (519)
Q Consensus 162 Ta~v~~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~Y~~sK~~aE~l 241 (519)
|....... +....|+.||+..+.+
T Consensus 138 S~~~~~~~--------------------------------------------------------~~~~~Y~~sK~a~~~~ 161 (272)
T PRK07832 138 SAAGLVAL--------------------------------------------------------PWHAAYSASKFGLRGL 161 (272)
T ss_pred cccccCCC--------------------------------------------------------CCCcchHHHHHHHHHH
Confidence 97432110 1234699999877766
Q ss_pred HHHh-----hcCCcEEEEecCccccCCCCCC--CcccccccccHHHHHHhhcCCceeeccCCCceeeeeeHHHHHHHHHH
Q 010075 242 MQQS-----KENLSLVIIRPTVVSGTYKEPF--PGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMIV 314 (519)
Q Consensus 242 v~~~-----~~~lp~~IvRPs~V~g~~~~p~--~gw~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~d~vpVDdva~aii~ 314 (519)
.+.. ..++++++++||.+.++..... .+... ......... .. .....+..+++|++++.
T Consensus 162 ~~~l~~e~~~~~i~v~~v~Pg~v~t~~~~~~~~~~~~~----~~~~~~~~~--------~~--~~~~~~~~~~vA~~~~~ 227 (272)
T PRK07832 162 SEVLRFDLARHGIGVSVVVPGAVKTPLVNTVEIAGVDR----EDPRVQKWV--------DR--FRGHAVTPEKAAEKILA 227 (272)
T ss_pred HHHHHHHhhhcCcEEEEEecCcccCcchhcccccccCc----chhhHHHHH--------Hh--cccCCCCHHHHHHHHHH
Confidence 6533 4579999999999987653221 00000 000000000 00 01124789999999999
Q ss_pred HHH
Q 010075 315 AMV 317 (519)
Q Consensus 315 a~~ 317 (519)
++.
T Consensus 228 ~~~ 230 (272)
T PRK07832 228 GVE 230 (272)
T ss_pred HHh
Confidence 985
|
|
| >PRK08993 2-deoxy-D-gluconate 3-dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.52 E-value=2.9e-13 Score=133.13 Aligned_cols=219 Identities=12% Similarity=0.117 Sum_probs=140.3
Q ss_pred cCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 010075 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (519)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (519)
++||+++||||+|+||++++++|++.| .+|+++.|... ....+++. + ...++..
T Consensus 8 l~~k~~lItG~~~gIG~a~a~~l~~~G---~~vv~~~~~~~-~~~~~~~~-------------~---------~~~~~~~ 61 (253)
T PRK08993 8 LEGKVAVVTGCDTGLGQGMALGLAEAG---CDIVGINIVEP-TETIEQVT-------------A---------LGRRFLS 61 (253)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCC---CEEEEecCcch-HHHHHHHH-------------h---------cCCeEEE
Confidence 678999999999999999999999988 56666655432 11111111 1 0246788
Q ss_pred EeccCCCCCCCCChhhhHHHHh-------cCccEEEEcCccCCc-------cccHHHHHHHhHHHHHHHHHHHHhc-c--
Q 010075 90 VPGDISSEDLGLKDSNLKEELW-------NELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKC-V-- 152 (519)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~-------~~vdiViH~Aa~v~f-------~~~~~~~~~~Nv~gt~~ll~~a~~~-~-- 152 (519)
+.+|+++++ ..+.++ .++|++||+||.... .+.++..+++|+.|+..+++.+... .
T Consensus 62 ~~~Dl~~~~-------~~~~~~~~~~~~~~~~D~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~ 134 (253)
T PRK08993 62 LTADLRKID-------GIPALLERAVAEFGHIDILVNNAGLIRREDAIEFSEKDWDDVMNLNIKSVFFMSQAAAKHFIAQ 134 (253)
T ss_pred EECCCCCHH-------HHHHHHHHHHHHhCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhC
Confidence 999999532 222322 369999999997542 2568888999999999998877542 1
Q ss_pred -CCceEEEEecceeecCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcHH
Q 010075 153 -KLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTY 231 (519)
Q Consensus 153 -~l~~~V~vSTa~v~~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~Y 231 (519)
.-.++|++||...+.... ....|
T Consensus 135 ~~~g~iv~isS~~~~~~~~--------------------------------------------------------~~~~Y 158 (253)
T PRK08993 135 GNGGKIINIASMLSFQGGI--------------------------------------------------------RVPSY 158 (253)
T ss_pred CCCeEEEEECchhhccCCC--------------------------------------------------------CCcch
Confidence 125799999986543211 12369
Q ss_pred HHHHHHHHHHHHHh-----hcCCcEEEEecCccccCCCCCCCcccccccccHHHHHHhhcCCceeeccCCCceeeeeeHH
Q 010075 232 VFTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVD 306 (519)
Q Consensus 232 ~~sK~~aE~lv~~~-----~~~lp~~IvRPs~V~g~~~~p~~gw~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~d~vpVD 306 (519)
+.||+..|.+.+.. ..++.+..++||.+-.+...... .. .......... .+. .-+...+
T Consensus 159 ~~sKaa~~~~~~~la~e~~~~gi~v~~v~pG~v~T~~~~~~~---~~----~~~~~~~~~~----~p~-----~r~~~p~ 222 (253)
T PRK08993 159 TASKSGVMGVTRLMANEWAKHNINVNAIAPGYMATNNTQQLR---AD----EQRSAEILDR----IPA-----GRWGLPS 222 (253)
T ss_pred HHHHHHHHHHHHHHHHHhhhhCeEEEEEeeCcccCcchhhhc---cc----hHHHHHHHhc----CCC-----CCCcCHH
Confidence 99999988888754 35799999999999765432110 00 0000111110 111 1256679
Q ss_pred HHHHHHHHHHHHhccCCCCCcEEEecCC
Q 010075 307 MVVNAMIVAMVAHAKQPSDANIYHVGSS 334 (519)
Q Consensus 307 dva~aii~a~~~~~~~~~~~~iyni~s~ 334 (519)
++|++++.++..... .-.+.++.+.+|
T Consensus 223 eva~~~~~l~s~~~~-~~~G~~~~~dgg 249 (253)
T PRK08993 223 DLMGPVVFLASSASD-YINGYTIAVDGG 249 (253)
T ss_pred HHHHHHHHHhCcccc-CccCcEEEECCC
Confidence 999999998864322 223556666544
|
|
| >PRK08339 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.52 E-value=9.3e-13 Score=130.45 Aligned_cols=233 Identities=10% Similarity=0.050 Sum_probs=143.3
Q ss_pred cCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 010075 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (519)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (519)
++||+++||||+|.||++++++|++.| .+|++..|+... .+.+.++ +++.. ..++.+
T Consensus 6 l~~k~~lItGas~gIG~aia~~l~~~G---~~V~~~~r~~~~---~~~~~~~---------~~~~~--------~~~~~~ 62 (263)
T PRK08339 6 LSGKLAFTTASSKGIGFGVARVLARAG---ADVILLSRNEEN---LKKAREK---------IKSES--------NVDVSY 62 (263)
T ss_pred CCCCEEEEeCCCCcHHHHHHHHHHHCC---CEEEEEeCCHHH---HHHHHHH---------HHhhc--------CCceEE
Confidence 578999999999999999999999998 578888886432 1222211 11111 246889
Q ss_pred EeccCCCCCCCCChhhhHHHHh------cCccEEEEcCccCCc-------cccHHHHHHHhHHHHHHHHHHHHh-c--cC
Q 010075 90 VPGDISSEDLGLKDSNLKEELW------NELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKK-C--VK 153 (519)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~------~~vdiViH~Aa~v~f-------~~~~~~~~~~Nv~gt~~ll~~a~~-~--~~ 153 (519)
+.+|++++. ..+.+. ..+|++||+||.... .+.++..+++|+.|...+.+.+.. + ++
T Consensus 63 ~~~Dv~~~~-------~i~~~~~~~~~~g~iD~lv~nag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~m~~~~ 135 (263)
T PRK08339 63 IVADLTKRE-------DLERTVKELKNIGEPDIFFFSTGGPKPGYFMEMSMEDWEGAVKLLLYPAVYLTRALVPAMERKG 135 (263)
T ss_pred EEecCCCHH-------HHHHHHHHHHhhCCCcEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC
Confidence 999999642 222332 369999999997432 256788899999887766655432 1 24
Q ss_pred CceEEEEecceeecCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcHHHH
Q 010075 154 LKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVF 233 (519)
Q Consensus 154 l~~~V~vSTa~v~~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~Y~~ 233 (519)
..++|++||....... .....|+.
T Consensus 136 ~g~Ii~isS~~~~~~~--------------------------------------------------------~~~~~y~a 159 (263)
T PRK08339 136 FGRIIYSTSVAIKEPI--------------------------------------------------------PNIALSNV 159 (263)
T ss_pred CCEEEEEcCccccCCC--------------------------------------------------------CcchhhHH
Confidence 5689999998643211 11246999
Q ss_pred HHHHHHHHHHHh-----hcCCcEEEEecCccccCCCCCC-Ccccccc-cccHHHHHHhhcCCceeeccCCCceeeeeeHH
Q 010075 234 TKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPF-PGWVEDL-KTINTLFVASAQGNLRCLVGETKVIMDVIPVD 306 (519)
Q Consensus 234 sK~~aE~lv~~~-----~~~lp~~IvRPs~V~g~~~~p~-~gw~~~~-~~~~~~i~~~~~g~~~~~~~~~~~~~d~vpVD 306 (519)
+|+..+.+.+.. ..++.+..+.||.|-.+..... ....... ............. . ....+...+
T Consensus 160 sKaal~~l~~~la~el~~~gIrVn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~-----p~~r~~~p~ 230 (263)
T PRK08339 160 VRISMAGLVRTLAKELGPKGITVNGIMPGIIRTDRVIQLAQDRAKREGKSVEEALQEYAKP----I-----PLGRLGEPE 230 (263)
T ss_pred HHHHHHHHHHHHHHHhcccCeEEEEEEeCcCccHHHHHHHHhhhhccCCCHHHHHHHHhcc----C-----CcccCcCHH
Confidence 999888877654 4579999999999866431100 0000000 0001111111110 0 112346689
Q ss_pred HHHHHHHHHHHHhccCCCCCcEEEecCCCCCc
Q 010075 307 MVVNAMIVAMVAHAKQPSDANIYHVGSSLRNP 338 (519)
Q Consensus 307 dva~aii~a~~~~~~~~~~~~iyni~s~~~~~ 338 (519)
|+|+++..++..... .-.+.++.+.+|...+
T Consensus 231 dva~~v~fL~s~~~~-~itG~~~~vdgG~~~~ 261 (263)
T PRK08339 231 EIGYLVAFLASDLGS-YINGAMIPVDGGRLNS 261 (263)
T ss_pred HHHHHHHHHhcchhc-CccCceEEECCCcccc
Confidence 999999888754322 2236777777764433
|
|
| >PRK07069 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.52 E-value=3.9e-13 Score=131.59 Aligned_cols=207 Identities=16% Similarity=0.196 Sum_probs=131.0
Q ss_pred EEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEEecc
Q 010075 14 TILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVPGD 93 (519)
Q Consensus 14 ~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v~gD 93 (519)
+|+||||+|+||+++++.|++.| .+|+++.|+... ..+.+.++ ++...+ ...+..+.+|
T Consensus 1 ~ilVtG~~~~iG~~~a~~l~~~G---~~v~~~~r~~~~--~~~~~~~~---------~~~~~~-------~~~~~~~~~D 59 (251)
T PRK07069 1 RAFITGAAGGLGRAIARRMAEQG---AKVFLTDINDAA--GLDAFAAE---------INAAHG-------EGVAFAAVQD 59 (251)
T ss_pred CEEEECCCChHHHHHHHHHHHCC---CEEEEEeCCcch--HHHHHHHH---------HHhcCC-------CceEEEEEee
Confidence 38999999999999999999988 578888887321 12222211 111110 1234568899
Q ss_pred CCCCCCCCChhhhHHHH-------hcCccEEEEcCccCCcc-------ccHHHHHHHhHH----HHHHHHHHHHhccCCc
Q 010075 94 ISSEDLGLKDSNLKEEL-------WNELDIMVNSAAITKFD-------ERYDVAFGINTL----GVIHLVNFAKKCVKLK 155 (519)
Q Consensus 94 l~~~~lgls~~~~~~~l-------~~~vdiViH~Aa~v~f~-------~~~~~~~~~Nv~----gt~~ll~~a~~~~~l~ 155 (519)
++++ ++ .+.+ ...+|+|||+|+..... +.+...+++|+. +++.+++.+++. +.+
T Consensus 60 ~~~~------~~-~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~~ 131 (251)
T PRK07069 60 VTDE------AQ-WQALLAQAADAMGGLSVLVNNAGVGSFGAIEQIELDEWRRVMAINVESIFLGCKHALPYLRAS-QPA 131 (251)
T ss_pred cCCH------HH-HHHHHHHHHHHcCCccEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhc-CCc
Confidence 9963 22 2222 24689999999976431 345677889998 677777777764 568
Q ss_pred eEEEEecceeecCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcHHHHHH
Q 010075 156 VFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTK 235 (519)
Q Consensus 156 ~~V~vSTa~v~~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~Y~~sK 235 (519)
+||++||...+... .....|+.+|
T Consensus 132 ~ii~~ss~~~~~~~--------------------------------------------------------~~~~~Y~~sK 155 (251)
T PRK07069 132 SIVNISSVAAFKAE--------------------------------------------------------PDYTAYNASK 155 (251)
T ss_pred EEEEecChhhccCC--------------------------------------------------------CCCchhHHHH
Confidence 99999998665421 1124699999
Q ss_pred HHHHHHHHHh-------hcCCcEEEEecCccccCCCCCCCcccccccccHHHHHHhhcCCceeeccCCCceeeeeeHHHH
Q 010075 236 TMGEMLMQQS-------KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMV 308 (519)
Q Consensus 236 ~~aE~lv~~~-------~~~lp~~IvRPs~V~g~~~~p~~gw~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~d~vpVDdv 308 (519)
+..+.+++.+ ..++.+..++|+.+.++...+..... ........+.++. ....+..++|+
T Consensus 156 ~a~~~~~~~la~e~~~~~~~i~v~~v~pg~v~t~~~~~~~~~~----~~~~~~~~~~~~~---------~~~~~~~~~~v 222 (251)
T PRK07069 156 AAVASLTKSIALDCARRGLDVRCNSIHPTFIRTGIVDPIFQRL----GEEEATRKLARGV---------PLGRLGEPDDV 222 (251)
T ss_pred HHHHHHHHHHHHHhcccCCcEEEEEEeecccCCcchhHHhhhc----cchhHHHHHhccC---------CCCCCcCHHHH
Confidence 9998888754 12488999999999887543211000 0011111111111 11234578999
Q ss_pred HHHHHHHHHH
Q 010075 309 VNAMIVAMVA 318 (519)
Q Consensus 309 a~aii~a~~~ 318 (519)
+++++.++..
T Consensus 223 a~~~~~l~~~ 232 (251)
T PRK07069 223 AHAVLYLASD 232 (251)
T ss_pred HHHHHHHcCc
Confidence 9999887653
|
|
| >PRK06171 sorbitol-6-phosphate 2-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.51 E-value=2.3e-13 Score=134.63 Aligned_cols=155 Identities=22% Similarity=0.257 Sum_probs=115.1
Q ss_pred cCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 010075 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (519)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (519)
+++|+++||||+|+||+++++.|++.| .+|+++.|+..... ..++.+
T Consensus 7 l~~k~vlItG~s~gIG~~la~~l~~~G---~~v~~~~~~~~~~~------------------------------~~~~~~ 53 (266)
T PRK06171 7 LQGKIIIVTGGSSGIGLAIVKELLANG---ANVVNADIHGGDGQ------------------------------HENYQF 53 (266)
T ss_pred CCCCEEEEeCCCChHHHHHHHHHHHCC---CEEEEEeCCccccc------------------------------cCceEE
Confidence 578999999999999999999999998 57778777643210 135778
Q ss_pred EeccCCCCCCCCChhhhHHHHh-------cCccEEEEcCccCCc----------------cccHHHHHHHhHHHHHHHHH
Q 010075 90 VPGDISSEDLGLKDSNLKEELW-------NELDIMVNSAAITKF----------------DERYDVAFGINTLGVIHLVN 146 (519)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~-------~~vdiViH~Aa~v~f----------------~~~~~~~~~~Nv~gt~~ll~ 146 (519)
+.+|++++ +..+.++ ..+|+|||+||.... .+.++..+++|+.|+..+++
T Consensus 54 ~~~D~~~~-------~~~~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~ 126 (266)
T PRK06171 54 VPTDVSSA-------EEVNHTVAEIIEKFGRIDGLVNNAGINIPRLLVDEKDPAGKYELNEAAFDKMFNINQKGVFLMSQ 126 (266)
T ss_pred EEccCCCH-------HHHHHHHHHHHHHcCCCCEEEECCcccCCccccccccccccccCCHHHHHHHHhhhchhHHHHHH
Confidence 99999963 2222222 368999999996421 14567789999999999998
Q ss_pred HHHhc---cCCceEEEEecceeecCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccc
Q 010075 147 FAKKC---VKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAK 223 (519)
Q Consensus 147 ~a~~~---~~l~~~V~vSTa~v~~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~ 223 (519)
++... .+..++|++||.......
T Consensus 127 ~~~~~~~~~~~g~iv~isS~~~~~~~------------------------------------------------------ 152 (266)
T PRK06171 127 AVARQMVKQHDGVIVNMSSEAGLEGS------------------------------------------------------ 152 (266)
T ss_pred HHHHHHHhcCCcEEEEEccccccCCC------------------------------------------------------
Confidence 88642 133579999987543211
Q ss_pred cCCCCcHHHHHHHHHHHHHHHh-----hcCCcEEEEecCccc
Q 010075 224 LHGWPNTYVFTKTMGEMLMQQS-----KENLSLVIIRPTVVS 260 (519)
Q Consensus 224 ~~~~~n~Y~~sK~~aE~lv~~~-----~~~lp~~IvRPs~V~ 260 (519)
.....|+.+|+..+.+++.. ..++++.+++||.+.
T Consensus 153 --~~~~~Y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~~~ 192 (266)
T PRK06171 153 --EGQSCYAATKAALNSFTRSWAKELGKHNIRVVGVAPGILE 192 (266)
T ss_pred --CCCchhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeccccc
Confidence 12357999999999888765 357999999999884
|
|
| >PRK12481 2-deoxy-D-gluconate 3-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.51 E-value=1.7e-13 Score=134.65 Aligned_cols=219 Identities=13% Similarity=0.130 Sum_probs=140.6
Q ss_pred cCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 010075 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (519)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (519)
++||+++||||||+||++++++|++.| .+|+++.|+... ...+.+. + ...++.+
T Consensus 6 l~~k~~lItGas~gIG~aia~~l~~~G---~~vv~~~~~~~~-~~~~~~~-------------~---------~~~~~~~ 59 (251)
T PRK12481 6 LNGKVAIITGCNTGLGQGMAIGLAKAG---ADIVGVGVAEAP-ETQAQVE-------------A---------LGRKFHF 59 (251)
T ss_pred cCCCEEEEeCCCchHHHHHHHHHHHCC---CEEEEecCchHH-HHHHHHH-------------H---------cCCeEEE
Confidence 578999999999999999999999998 567777765311 1111111 0 1256889
Q ss_pred EeccCCCCCCCCChhhhHHHHh-------cCccEEEEcCccCCc-------cccHHHHHHHhHHHHHHHHHHHHh-c--c
Q 010075 90 VPGDISSEDLGLKDSNLKEELW-------NELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKK-C--V 152 (519)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~-------~~vdiViH~Aa~v~f-------~~~~~~~~~~Nv~gt~~ll~~a~~-~--~ 152 (519)
+.+|+++++ + .+.++ .++|++||+||.... .+.++..+++|+.|+..+.+.+.+ + +
T Consensus 60 ~~~Dl~~~~------~-~~~~~~~~~~~~g~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~ 132 (251)
T PRK12481 60 ITADLIQQK------D-IDSIVSQAVEVMGHIDILINNAGIIRRQDLLEFGNKDWDDVININQKTVFFLSQAVAKQFVKQ 132 (251)
T ss_pred EEeCCCCHH------H-HHHHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHheeCcHHHHHHHHHHHHHHHHc
Confidence 999999632 2 22332 469999999997532 256788899999999988887653 2 1
Q ss_pred C-CceEEEEecceeecCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcHH
Q 010075 153 K-LKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTY 231 (519)
Q Consensus 153 ~-l~~~V~vSTa~v~~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~Y 231 (519)
+ -.++|++||...+... .....|
T Consensus 133 ~~~g~ii~isS~~~~~~~--------------------------------------------------------~~~~~Y 156 (251)
T PRK12481 133 GNGGKIINIASMLSFQGG--------------------------------------------------------IRVPSY 156 (251)
T ss_pred CCCCEEEEeCChhhcCCC--------------------------------------------------------CCCcch
Confidence 2 3589999998654321 112369
Q ss_pred HHHHHHHHHHHHHh-----hcCCcEEEEecCccccCCCCCCCcccccccccHHHHHHhhcCCceeeccCCCceeeeeeHH
Q 010075 232 VFTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVD 306 (519)
Q Consensus 232 ~~sK~~aE~lv~~~-----~~~lp~~IvRPs~V~g~~~~p~~gw~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~d~vpVD 306 (519)
+.||+..+.+++.. ..++++..++||.|-.+....... ........... ++ ...+...+
T Consensus 157 ~asK~a~~~l~~~la~e~~~~girvn~v~PG~v~t~~~~~~~~-------~~~~~~~~~~~----~p-----~~~~~~pe 220 (251)
T PRK12481 157 TASKSAVMGLTRALATELSQYNINVNAIAPGYMATDNTAALRA-------DTARNEAILER----IP-----ASRWGTPD 220 (251)
T ss_pred HHHHHHHHHHHHHHHHHHhhcCeEEEEEecCCCccCchhhccc-------ChHHHHHHHhc----CC-----CCCCcCHH
Confidence 99999999888754 358999999999986653211100 00011111111 11 11246779
Q ss_pred HHHHHHHHHHHHhccCCCCCcEEEecCC
Q 010075 307 MVVNAMIVAMVAHAKQPSDANIYHVGSS 334 (519)
Q Consensus 307 dva~aii~a~~~~~~~~~~~~iyni~s~ 334 (519)
|+|+++..++..... .-.+.+..+.+|
T Consensus 221 eva~~~~~L~s~~~~-~~~G~~i~vdgg 247 (251)
T PRK12481 221 DLAGPAIFLSSSASD-YVTGYTLAVDGG 247 (251)
T ss_pred HHHHHHHHHhCcccc-CcCCceEEECCC
Confidence 999999988753222 122456666554
|
|
| >TIGR02632 RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alcohol dehydrogenase | Back alignment and domain information |
|---|
Probab=99.51 E-value=5.4e-13 Score=148.75 Aligned_cols=232 Identities=14% Similarity=0.138 Sum_probs=144.1
Q ss_pred hcCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceE
Q 010075 9 FLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKIT 88 (519)
Q Consensus 9 ~~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~ 88 (519)
.+++|+||||||+|+||++++++|++.| .+|+++.|+... .+.+. +.+....+ ..++.
T Consensus 411 ~l~gkvvLVTGasggIG~aiA~~La~~G---a~Vvi~~r~~~~---~~~~~---------~~l~~~~~-------~~~~~ 468 (676)
T TIGR02632 411 TLARRVAFVTGGAGGIGRETARRLAAEG---AHVVLADLNLEA---AEAVA---------AEINGQFG-------AGRAV 468 (676)
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHhCC---CEEEEEeCCHHH---HHHHH---------HHHHhhcC-------CCcEE
Confidence 3578999999999999999999999988 578888886422 11111 11111111 13577
Q ss_pred EEeccCCCCCCCCChhhhHHHHh-------cCccEEEEcCccCCc-------cccHHHHHHHhHHHHHHHHHHHH----h
Q 010075 89 FVPGDISSEDLGLKDSNLKEELW-------NELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAK----K 150 (519)
Q Consensus 89 ~v~gDl~~~~lgls~~~~~~~l~-------~~vdiViH~Aa~v~f-------~~~~~~~~~~Nv~gt~~ll~~a~----~ 150 (519)
.+.+|++++ +....++ .++|+|||+||.... .+.++..+++|+.|...+.+.+. +
T Consensus 469 ~v~~Dvtd~-------~~v~~a~~~i~~~~g~iDilV~nAG~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~al~~m~~ 541 (676)
T TIGR02632 469 ALKMDVTDE-------QAVKAAFADVALAYGGVDIVVNNAGIATSSPFEETTLQEWQLNLDILATGYFLVAREAFRQMRE 541 (676)
T ss_pred EEECCCCCH-------HHHHHHHHHHHHhcCCCcEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 899999963 2222333 369999999997532 13467778999999877765443 2
Q ss_pred ccCCceEEEEecceeecCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcH
Q 010075 151 CVKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNT 230 (519)
Q Consensus 151 ~~~l~~~V~vSTa~v~~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~ 230 (519)
.+.-.++|++||....... .....
T Consensus 542 ~~~~g~IV~iSS~~a~~~~--------------------------------------------------------~~~~a 565 (676)
T TIGR02632 542 QGLGGNIVFIASKNAVYAG--------------------------------------------------------KNASA 565 (676)
T ss_pred cCCCCEEEEEeChhhcCCC--------------------------------------------------------CCCHH
Confidence 2123579999986432211 12357
Q ss_pred HHHHHHHHHHHHHHh-----hcCCcEEEEecCccc-cCCCCCCCcccccc---cccH-HHHHHhhcCCceeeccCCCcee
Q 010075 231 YVFTKTMGEMLMQQS-----KENLSLVIIRPTVVS-GTYKEPFPGWVEDL---KTIN-TLFVASAQGNLRCLVGETKVIM 300 (519)
Q Consensus 231 Y~~sK~~aE~lv~~~-----~~~lp~~IvRPs~V~-g~~~~p~~gw~~~~---~~~~-~~i~~~~~g~~~~~~~~~~~~~ 300 (519)
|+.||+..|.+++.+ ..++++..++|+.|. ++.. .-.+|.... .+.. .-+ ...+.......
T Consensus 566 Y~aSKaA~~~l~r~lA~el~~~gIrVn~V~Pg~V~~~s~~-~~~~~~~~~~~~~~~~~~~~--------~~~~~~r~~l~ 636 (676)
T TIGR02632 566 YSAAKAAEAHLARCLAAEGGTYGIRVNTVNPDAVLQGSGI-WDGEWREERAAAYGIPADEL--------EEHYAKRTLLK 636 (676)
T ss_pred HHHHHHHHHHHHHHHHHHhcccCeEEEEEECCceecCccc-ccccchhhhhhcccCChHHH--------HHHHHhcCCcC
Confidence 999999999998865 347999999999886 3211 001222110 0000 000 00111222234
Q ss_pred eeeeHHHHHHHHHHHHHHhccCCCCCcEEEecCCC
Q 010075 301 DVIPVDMVVNAMIVAMVAHAKQPSDANIYHVGSSL 335 (519)
Q Consensus 301 d~vpVDdva~aii~a~~~~~~~~~~~~iyni~s~~ 335 (519)
..+..+|||+++..++..... ...+.++++.+|.
T Consensus 637 r~v~peDVA~av~~L~s~~~~-~~TG~~i~vDGG~ 670 (676)
T TIGR02632 637 RHIFPADIAEAVFFLASSKSE-KTTGCIITVDGGV 670 (676)
T ss_pred CCcCHHHHHHHHHHHhCCccc-CCcCcEEEECCCc
Confidence 568889999999988753222 2236789988774
|
|
| >PRK07201 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.51 E-value=2e-12 Score=144.49 Aligned_cols=195 Identities=15% Similarity=0.213 Sum_probs=135.9
Q ss_pred cCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 010075 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (519)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (519)
++||+++||||||+||++++++|++.| .+|+++.|+... .+.+.++ +.. ...++.+
T Consensus 369 ~~~k~vlItGas~giG~~la~~l~~~G---~~V~~~~r~~~~---~~~~~~~---------~~~---------~~~~~~~ 424 (657)
T PRK07201 369 LVGKVVLITGASSGIGRATAIKVAEAG---ATVFLVARNGEA---LDELVAE---------IRA---------KGGTAHA 424 (657)
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCC---CEEEEEECCHHH---HHHHHHH---------HHh---------cCCcEEE
Confidence 568999999999999999999999988 678999886422 1222111 111 0246889
Q ss_pred EeccCCCCCCCCChhhhHHHHh-------cCccEEEEcCccCCc---------cccHHHHHHHhHHHHHHHHHHHHh-c-
Q 010075 90 VPGDISSEDLGLKDSNLKEELW-------NELDIMVNSAAITKF---------DERYDVAFGINTLGVIHLVNFAKK-C- 151 (519)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~-------~~vdiViH~Aa~v~f---------~~~~~~~~~~Nv~gt~~ll~~a~~-~- 151 (519)
+.+|++++ +..+.++ .++|++||+||.... .+.++..+++|+.|+.++.+.+.. +
T Consensus 425 ~~~Dv~~~-------~~~~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~ 497 (657)
T PRK07201 425 YTCDLTDS-------AAVDHTVKDILAEHGHVDYLVNNAGRSIRRSVENSTDRFHDYERTMAVNYFGAVRLILGLLPHMR 497 (657)
T ss_pred EEecCCCH-------HHHHHHHHHHHHhcCCCCEEEECCCCCCCCChhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHhhh
Confidence 99999963 2222333 369999999996421 135677899999999888766532 1
Q ss_pred -cCCceEEEEecceeecCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcH
Q 010075 152 -VKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNT 230 (519)
Q Consensus 152 -~~l~~~V~vSTa~v~~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~ 230 (519)
.+..++|++||..++... .....
T Consensus 498 ~~~~g~iv~isS~~~~~~~--------------------------------------------------------~~~~~ 521 (657)
T PRK07201 498 ERRFGHVVNVSSIGVQTNA--------------------------------------------------------PRFSA 521 (657)
T ss_pred hcCCCEEEEECChhhcCCC--------------------------------------------------------CCcch
Confidence 255789999998765421 12346
Q ss_pred HHHHHHHHHHHHHHh-----hcCCcEEEEecCccccCCCCCCCcccccccccHHHHHHhhcCCceeeccCCCceeeeeeH
Q 010075 231 YVFTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPV 305 (519)
Q Consensus 231 Y~~sK~~aE~lv~~~-----~~~lp~~IvRPs~V~g~~~~p~~gw~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~d~vpV 305 (519)
|+.||+..+.+++.. ..++.+++++||.|..+...+... .. ....++.
T Consensus 522 Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pg~v~T~~~~~~~~-----------------------~~----~~~~~~~ 574 (657)
T PRK07201 522 YVASKAALDAFSDVAASETLSDGITFTTIHMPLVRTPMIAPTKR-----------------------YN----NVPTISP 574 (657)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhCCcEEEEECCcCcccccCcccc-----------------------cc----CCCCCCH
Confidence 999999999988754 357999999999987754322100 00 1124789
Q ss_pred HHHHHHHHHHHHH
Q 010075 306 DMVVNAMIVAMVA 318 (519)
Q Consensus 306 Ddva~aii~a~~~ 318 (519)
+++|+.++.++.+
T Consensus 575 ~~~a~~i~~~~~~ 587 (657)
T PRK07201 575 EEAADMVVRAIVE 587 (657)
T ss_pred HHHHHHHHHHHHh
Confidence 9999999998763
|
|
| >PRK08703 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.50 E-value=1.8e-12 Score=126.17 Aligned_cols=175 Identities=15% Similarity=0.136 Sum_probs=116.0
Q ss_pred cCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 010075 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (519)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (519)
+++++|+||||+|+||+++++.|++.| .+|+++.|+... .+.+. +.+++.. ...+..
T Consensus 4 l~~k~vlItG~sggiG~~la~~l~~~g---~~V~~~~r~~~~---~~~~~---------~~l~~~~--------~~~~~~ 60 (239)
T PRK08703 4 LSDKTILVTGASQGLGEQVAKAYAAAG---ATVILVARHQKK---LEKVY---------DAIVEAG--------HPEPFA 60 (239)
T ss_pred CCCCEEEEECCCCcHHHHHHHHHHHcC---CEEEEEeCChHH---HHHHH---------HHHHHcC--------CCCcce
Confidence 578999999999999999999999988 578888887532 11111 1222111 134567
Q ss_pred EeccCCCCCCCCChhhhHHHH---h-cCccEEEEcCccCC----cc----ccHHHHHHHhHHHHHHHHHHHHhc---cCC
Q 010075 90 VPGDISSEDLGLKDSNLKEEL---W-NELDIMVNSAAITK----FD----ERYDVAFGINTLGVIHLVNFAKKC---VKL 154 (519)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l---~-~~vdiViH~Aa~v~----f~----~~~~~~~~~Nv~gt~~ll~~a~~~---~~l 154 (519)
+.+|+++.... +.....+.+ . .++|+|||+||... +. +.+...+++|+.|+..+++.+.+. .+.
T Consensus 61 ~~~D~~~~~~~-~~~~~~~~i~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~ 139 (239)
T PRK08703 61 IRFDLMSAEEK-EFEQFAATIAEATQGKLDGIVHCAGYFYALSPLDFQTVAEWVNQYRINTVAPMGLTRALFPLLKQSPD 139 (239)
T ss_pred EEeeecccchH-HHHHHHHHHHHHhCCCCCEEEEeccccccCCCccccCHHHHHHHHHHhhhHHHHHHHHHHHHHHhCCC
Confidence 88898742100 001111111 2 56899999999642 11 456677999999999888877542 134
Q ss_pred ceEEEEecceeecCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcHHHHH
Q 010075 155 KVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFT 234 (519)
Q Consensus 155 ~~~V~vSTa~v~~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~Y~~s 234 (519)
.++|++||...... . .....|+.|
T Consensus 140 ~~iv~~ss~~~~~~---------~-----------------------------------------------~~~~~Y~~s 163 (239)
T PRK08703 140 ASVIFVGESHGETP---------K-----------------------------------------------AYWGGFGAS 163 (239)
T ss_pred CEEEEEeccccccC---------C-----------------------------------------------CCccchHHh
Confidence 68999988532110 0 122469999
Q ss_pred HHHHHHHHHHh----h--cCCcEEEEecCccccCCC
Q 010075 235 KTMGEMLMQQS----K--ENLSLVIIRPTVVSGTYK 264 (519)
Q Consensus 235 K~~aE~lv~~~----~--~~lp~~IvRPs~V~g~~~ 264 (519)
|+..|.+++.+ . .++.+.+++||.|.++..
T Consensus 164 Kaa~~~~~~~la~e~~~~~~i~v~~v~pG~v~t~~~ 199 (239)
T PRK08703 164 KAALNYLCKVAADEWERFGNLRANVLVPGPINSPQR 199 (239)
T ss_pred HHHHHHHHHHHHHHhccCCCeEEEEEecCcccCccc
Confidence 99999998754 1 259999999999988753
|
|
| >PRK06200 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.50 E-value=2.8e-13 Score=133.94 Aligned_cols=230 Identities=15% Similarity=0.186 Sum_probs=140.8
Q ss_pred cCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 010075 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (519)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (519)
+++|+++||||||+||+++++.|++.| .+|+++.|+... .+++. ++. ..++.+
T Consensus 4 ~~~k~vlVtGas~gIG~~ia~~l~~~G---~~V~~~~r~~~~---~~~~~-------------~~~--------~~~~~~ 56 (263)
T PRK06200 4 LHGQVALITGGGSGIGRALVERFLAEG---ARVAVLERSAEK---LASLR-------------QRF--------GDHVLV 56 (263)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCC---CEEEEEeCCHHH---HHHHH-------------HHh--------CCcceE
Confidence 578999999999999999999999988 578888886422 12221 111 246788
Q ss_pred EeccCCCCCCCCChhhhHHHH---hcCccEEEEcCccCCc-----c---c----cHHHHHHHhHHHHHHHHHHHHhc--c
Q 010075 90 VPGDISSEDLGLKDSNLKEEL---WNELDIMVNSAAITKF-----D---E----RYDVAFGINTLGVIHLVNFAKKC--V 152 (519)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l---~~~vdiViH~Aa~v~f-----~---~----~~~~~~~~Nv~gt~~ll~~a~~~--~ 152 (519)
+.+|++++.. .....+.+ ..++|++||+||.... + + .++..+++|+.|+..+++.+.+. +
T Consensus 57 ~~~D~~~~~~---~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~ 133 (263)
T PRK06200 57 VEGDVTSYAD---NQRAVDQTVDAFGKLDCFVGNAGIWDYNTSLVDIPAETLDTAFDEIFNVNVKGYLLGAKAALPALKA 133 (263)
T ss_pred EEccCCCHHH---HHHHHHHHHHhcCCCCEEEECCCCcccCCCcccCChhHHHHHHHHHeeeccHhHHHHHHHHHHHHHh
Confidence 9999996421 01111111 2469999999996431 1 1 15667889999999988887642 1
Q ss_pred CCceEEEEecceeecCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcHHH
Q 010075 153 KLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYV 232 (519)
Q Consensus 153 ~l~~~V~vSTa~v~~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~Y~ 232 (519)
.-.++|++||...+... .....|+
T Consensus 134 ~~g~iv~~sS~~~~~~~--------------------------------------------------------~~~~~Y~ 157 (263)
T PRK06200 134 SGGSMIFTLSNSSFYPG--------------------------------------------------------GGGPLYT 157 (263)
T ss_pred cCCEEEEECChhhcCCC--------------------------------------------------------CCCchhH
Confidence 22579999987654311 1234699
Q ss_pred HHHHHHHHHHHHh----hcCCcEEEEecCccccCCCCCCC-cccc-cccccHHHHHHhhcCCceeeccCCCceeeeeeHH
Q 010075 233 FTKTMGEMLMQQS----KENLSLVIIRPTVVSGTYKEPFP-GWVE-DLKTINTLFVASAQGNLRCLVGETKVIMDVIPVD 306 (519)
Q Consensus 233 ~sK~~aE~lv~~~----~~~lp~~IvRPs~V~g~~~~p~~-gw~~-~~~~~~~~i~~~~~g~~~~~~~~~~~~~d~vpVD 306 (519)
.||+..+.+++.. .+++.+..+.||.|..+...+.. +-.. ............. .. ....-+...+
T Consensus 158 ~sK~a~~~~~~~la~el~~~Irvn~i~PG~i~t~~~~~~~~~~~~~~~~~~~~~~~~~~-~~--------~p~~r~~~~~ 228 (263)
T PRK06200 158 ASKHAVVGLVRQLAYELAPKIRVNGVAPGGTVTDLRGPASLGQGETSISDSPGLADMIA-AI--------TPLQFAPQPE 228 (263)
T ss_pred HHHHHHHHHHHHHHHHHhcCcEEEEEeCCccccCCcCccccCCCCcccccccchhHHhh-cC--------CCCCCCCCHH
Confidence 9999999888765 44699999999999765432110 0000 0000000000110 00 0112356678
Q ss_pred HHHHHHHHHHHHhccCCCCCcEEEecCC
Q 010075 307 MVVNAMIVAMVAHAKQPSDANIYHVGSS 334 (519)
Q Consensus 307 dva~aii~a~~~~~~~~~~~~iyni~s~ 334 (519)
|++++++.++.......-.+.++.+.+|
T Consensus 229 eva~~~~fl~s~~~~~~itG~~i~vdgG 256 (263)
T PRK06200 229 DHTGPYVLLASRRNSRALTGVVINADGG 256 (263)
T ss_pred HHhhhhhheecccccCcccceEEEEcCc
Confidence 9999998887533121223567777655
|
|
| >KOG1205 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=99.49 E-value=3.6e-13 Score=132.13 Aligned_cols=137 Identities=23% Similarity=0.230 Sum_probs=96.5
Q ss_pred hhhcCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCc
Q 010075 7 VEFLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEK 86 (519)
Q Consensus 7 ~~~~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~ 86 (519)
.+.++||+|+|||||..||.+++..|.+.| .++++++|..+.. +++.++ +++..+ .++
T Consensus 7 ~e~~~~kvVvITGASsGIG~~lA~~la~~G---~~l~lvar~~rrl---~~v~~~---------l~~~~~-------~~~ 64 (282)
T KOG1205|consen 7 MERLAGKVVLITGASSGIGEALAYELAKRG---AKLVLVARRARRL---ERVAEE---------LRKLGS-------LEK 64 (282)
T ss_pred HHHhCCCEEEEeCCCcHHHHHHHHHHHhCC---CceEEeehhhhhH---HHHHHH---------HHHhCC-------cCc
Confidence 356789999999999999999999999998 6778888876543 333211 222222 136
Q ss_pred eEEEeccCCCCCCCCChhhhHHHHhcCccEEEEcCccCCc-------cccHHHHHHHhHHHHHHHHHHHHhc---cCCce
Q 010075 87 ITFVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKC---VKLKV 156 (519)
Q Consensus 87 v~~v~gDl~~~~lgls~~~~~~~l~~~vdiViH~Aa~v~f-------~~~~~~~~~~Nv~gt~~ll~~a~~~---~~l~~ 156 (519)
+.++++|+++.+.-...-++....+.++|++||+||.... .++....+++|+.|+..+.+++... .+-.+
T Consensus 65 v~~~~~Dvs~~~~~~~~~~~~~~~fg~vDvLVNNAG~~~~~~~~~~~~~~~~~~mdtN~~G~V~~Tk~alp~m~~r~~Gh 144 (282)
T KOG1205|consen 65 VLVLQLDVSDEESVKKFVEWAIRHFGRVDVLVNNAGISLVGFLEDTDIEDVRNVMDTNVFGTVYLTKAALPSMKKRNDGH 144 (282)
T ss_pred cEEEeCccCCHHHHHHHHHHHHHhcCCCCEEEecCccccccccccCcHHHHHHHhhhhchhhHHHHHHHHHHhhhcCCCe
Confidence 9999999997442222222222455789999999998753 1456778999999988887776432 23468
Q ss_pred EEEEeccee
Q 010075 157 FVHVSTAYV 165 (519)
Q Consensus 157 ~V~vSTa~v 165 (519)
+|.+||..-
T Consensus 145 IVvisSiaG 153 (282)
T KOG1205|consen 145 IVVISSIAG 153 (282)
T ss_pred EEEEecccc
Confidence 999999753
|
|
| >COG0300 DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.49 E-value=3.6e-12 Score=124.18 Aligned_cols=205 Identities=17% Similarity=0.210 Sum_probs=137.9
Q ss_pred hcCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceE
Q 010075 9 FLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKIT 88 (519)
Q Consensus 9 ~~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~ 88 (519)
.+.+++++||||||.||..++++|.++| +.++++.|++.. ++++.++ ++.+. .-++.
T Consensus 3 ~~~~~~~lITGASsGIG~~~A~~lA~~g---~~liLvaR~~~k---L~~la~~---------l~~~~--------~v~v~ 59 (265)
T COG0300 3 PMKGKTALITGASSGIGAELAKQLARRG---YNLILVARREDK---LEALAKE---------LEDKT--------GVEVE 59 (265)
T ss_pred CCCCcEEEEECCCchHHHHHHHHHHHCC---CEEEEEeCcHHH---HHHHHHH---------HHHhh--------CceEE
Confidence 4678999999999999999999999999 678999998532 2333322 22222 24678
Q ss_pred EEeccCCCCCCCCChhhhH-HHHhc---CccEEEEcCccCCcc-------ccHHHHHHHhHHHHHHHHHHHHh-c--cCC
Q 010075 89 FVPGDISSEDLGLKDSNLK-EELWN---ELDIMVNSAAITKFD-------ERYDVAFGINTLGVIHLVNFAKK-C--VKL 154 (519)
Q Consensus 89 ~v~gDl~~~~lgls~~~~~-~~l~~---~vdiViH~Aa~v~f~-------~~~~~~~~~Nv~gt~~ll~~a~~-~--~~l 154 (519)
++..|+++++ +...+ .++.+ .+|++||+||...+. +..+..+++|+.++..|..+... + .+-
T Consensus 60 vi~~DLs~~~----~~~~l~~~l~~~~~~IdvLVNNAG~g~~g~f~~~~~~~~~~mi~lN~~a~~~LT~~~lp~m~~~~~ 135 (265)
T COG0300 60 VIPADLSDPE----ALERLEDELKERGGPIDVLVNNAGFGTFGPFLELSLDEEEEMIQLNILALTRLTKAVLPGMVERGA 135 (265)
T ss_pred EEECcCCChh----HHHHHHHHHHhcCCcccEEEECCCcCCccchhhCChHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 9999999753 11111 12222 599999999997653 45667799999998877665532 1 245
Q ss_pred ceEEEEecceeecCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcHHHHH
Q 010075 155 KVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFT 234 (519)
Q Consensus 155 ~~~V~vSTa~v~~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~Y~~s 234 (519)
.++|.++|...+-.. +....|+.|
T Consensus 136 G~IiNI~S~ag~~p~--------------------------------------------------------p~~avY~AT 159 (265)
T COG0300 136 GHIINIGSAAGLIPT--------------------------------------------------------PYMAVYSAT 159 (265)
T ss_pred ceEEEEechhhcCCC--------------------------------------------------------cchHHHHHH
Confidence 689999998655321 234689999
Q ss_pred HHHHHHHH----HHh-hcCCcEEEEecCccccCCCCCCCcccccccccHHHHHHhhcCCceeeccCCCceeeeeeHHHHH
Q 010075 235 KTMGEMLM----QQS-KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVV 309 (519)
Q Consensus 235 K~~aE~lv----~~~-~~~lp~~IvRPs~V~g~~~~p~~gw~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~d~vpVDdva 309 (519)
|+..-.+. .+. ..++.|..+=||.+.....+. +. .+.. ......-++..++||
T Consensus 160 Ka~v~~fSeaL~~EL~~~gV~V~~v~PG~~~T~f~~~-----~~------------~~~~-----~~~~~~~~~~~~~va 217 (265)
T COG0300 160 KAFVLSFSEALREELKGTGVKVTAVCPGPTRTEFFDA-----KG------------SDVY-----LLSPGELVLSPEDVA 217 (265)
T ss_pred HHHHHHHHHHHHHHhcCCCeEEEEEecCccccccccc-----cc------------cccc-----cccchhhccCHHHHH
Confidence 98654443 333 567999999999887654320 00 0000 000123467889999
Q ss_pred HHHHHHHHH
Q 010075 310 NAMIVAMVA 318 (519)
Q Consensus 310 ~aii~a~~~ 318 (519)
++.+.++.+
T Consensus 218 ~~~~~~l~~ 226 (265)
T COG0300 218 EAALKALEK 226 (265)
T ss_pred HHHHHHHhc
Confidence 999999974
|
|
| >PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA | Back alignment and domain information |
|---|
Probab=99.49 E-value=1.1e-12 Score=127.40 Aligned_cols=207 Identities=19% Similarity=0.194 Sum_probs=135.5
Q ss_pred EEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEEeccC
Q 010075 15 ILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVPGDI 94 (519)
Q Consensus 15 VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v~gDl 94 (519)
|+||||||.+|+.+++.|++.+ .+|.+++|+.+.. ..+.++ ...++++.+|+
T Consensus 1 I~V~GatG~~G~~v~~~L~~~~---~~V~~l~R~~~~~-~~~~l~------------------------~~g~~vv~~d~ 52 (233)
T PF05368_consen 1 ILVTGATGNQGRSVVRALLSAG---FSVRALVRDPSSD-RAQQLQ------------------------ALGAEVVEADY 52 (233)
T ss_dssp EEEETTTSHHHHHHHHHHHHTT---GCEEEEESSSHHH-HHHHHH------------------------HTTTEEEES-T
T ss_pred CEEECCccHHHHHHHHHHHhCC---CCcEEEEeccchh-hhhhhh------------------------cccceEeeccc
Confidence 7999999999999999999966 6889999987322 122222 14578899999
Q ss_pred CCCCCCCChhhhHHHHhcCccEEEEcCccCCccccHHHHHHHhHHHHHHHHHHHHhccCCceEEEEecceeecCcCCeee
Q 010075 95 SSEDLGLKDSNLKEELWNELDIMVNSAAITKFDERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAYVAGERTGLIL 174 (519)
Q Consensus 95 ~~~~lgls~~~~~~~l~~~vdiViH~Aa~v~f~~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V~vSTa~v~~~~~~~i~ 174 (519)
. +.+.+...++++|.||.+-+... ..-+....+++++|++. ++++||+.|....+....+
T Consensus 53 ~-------~~~~l~~al~g~d~v~~~~~~~~---------~~~~~~~~~li~Aa~~a-gVk~~v~ss~~~~~~~~~~--- 112 (233)
T PF05368_consen 53 D-------DPESLVAALKGVDAVFSVTPPSH---------PSELEQQKNLIDAAKAA-GVKHFVPSSFGADYDESSG--- 112 (233)
T ss_dssp T--------HHHHHHHHTTCSEEEEESSCSC---------CCHHHHHHHHHHHHHHH-T-SEEEESEESSGTTTTTT---
T ss_pred C-------CHHHHHHHHcCCceEEeecCcch---------hhhhhhhhhHHHhhhcc-ccceEEEEEeccccccccc---
Confidence 9 44555688899999998877543 11234567899999997 7999997554333211100
Q ss_pred cccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcHHHHHHHHHHHHHHHhhcCCcEEEE
Q 010075 175 ENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLMQQSKENLSLVII 254 (519)
Q Consensus 175 E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~Y~~sK~~aE~lv~~~~~~lp~~Iv 254 (519)
. .+....-..|...|+.+++ .+++++++
T Consensus 113 --~------------------------------------------------~p~~~~~~~k~~ie~~l~~--~~i~~t~i 140 (233)
T PF05368_consen 113 --S------------------------------------------------EPEIPHFDQKAEIEEYLRE--SGIPYTII 140 (233)
T ss_dssp --S------------------------------------------------TTHHHHHHHHHHHHHHHHH--CTSEBEEE
T ss_pred --c------------------------------------------------cccchhhhhhhhhhhhhhh--ccccceec
Confidence 0 1112233578888998887 49999999
Q ss_pred ecCccccCCCCCCCcccccccccHHHHHHhhcC-CceeeccCCCceeeee-eHHHHHHHHHHHHHHhccCCCCCcEEEec
Q 010075 255 RPTVVSGTYKEPFPGWVEDLKTINTLFVASAQG-NLRCLVGETKVIMDVI-PVDMVVNAMIVAMVAHAKQPSDANIYHVG 332 (519)
Q Consensus 255 RPs~V~g~~~~p~~gw~~~~~~~~~~i~~~~~g-~~~~~~~~~~~~~d~v-pVDdva~aii~a~~~~~~~~~~~~iyni~ 332 (519)
|||+.+...-.++.++.+ .... ....++++++....++ ..+|+++++..++..+... ..+..++++
T Consensus 141 ~~g~f~e~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~Dvg~~va~il~~p~~~-~~~~~~~~~ 208 (233)
T PF05368_consen 141 RPGFFMENLLPPFAPVVD-----------IKKSKDVVTLPGPGNQKAVPVTDTRDVGRAVAAILLDPEKH-NNGKTIFLA 208 (233)
T ss_dssp EE-EEHHHHHTTTHHTTC-----------SCCTSSEEEEETTSTSEEEEEEHHHHHHHHHHHHHHSGGGT-TEEEEEEEG
T ss_pred cccchhhhhhhhhccccc-----------ccccceEEEEccCCCccccccccHHHHHHHHHHHHcChHHh-cCCEEEEeC
Confidence 999876654322211111 1111 1345667777666675 9999999999999864332 135677776
Q ss_pred C
Q 010075 333 S 333 (519)
Q Consensus 333 s 333 (519)
+
T Consensus 209 ~ 209 (233)
T PF05368_consen 209 G 209 (233)
T ss_dssp G
T ss_pred C
Confidence 5
|
NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B .... |
| >TIGR01831 fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductase, putative | Back alignment and domain information |
|---|
Probab=99.49 E-value=1.2e-12 Score=127.41 Aligned_cols=214 Identities=11% Similarity=0.072 Sum_probs=133.6
Q ss_pred EEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEEeccC
Q 010075 15 ILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVPGDI 94 (519)
Q Consensus 15 VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v~gDl 94 (519)
|+||||||+||+++++.|++.| .+|+++.|+.... .+.+. +.+++. ..++.++.+|+
T Consensus 1 vlItGas~giG~~~a~~l~~~G---~~v~~~~~~~~~~--~~~~~---------~~l~~~---------~~~~~~~~~Dl 57 (239)
T TIGR01831 1 VLVTGASRGIGRAIANRLAADG---FEICVHYHSGRSD--AESVV---------SAIQAQ---------GGNARLLQFDV 57 (239)
T ss_pred CEEeCCCchHHHHHHHHHHHCC---CEEEEEeCCCHHH--HHHHH---------HHHHHc---------CCeEEEEEccC
Confidence 6899999999999999999988 5678887754221 11111 111111 25688999999
Q ss_pred CCCCCCCChhhhHHHH-------hcCccEEEEcCccCCc-------cccHHHHHHHhHHHHHHHHHHHH-hc---cCCce
Q 010075 95 SSEDLGLKDSNLKEEL-------WNELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAK-KC---VKLKV 156 (519)
Q Consensus 95 ~~~~lgls~~~~~~~l-------~~~vdiViH~Aa~v~f-------~~~~~~~~~~Nv~gt~~ll~~a~-~~---~~l~~ 156 (519)
++++ + ...+ ...+|++||+|+.... .+.++..+++|+.|+.++++.+. .+ .+..+
T Consensus 58 ~~~~------~-~~~~~~~~~~~~~~i~~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~ 130 (239)
T TIGR01831 58 ADRV------A-CRTLLEADIAEHGAYYGVVLNAGITRDAAFPALSEEDWDIVIHTNLDGFYNVIHPCTMPMIRARQGGR 130 (239)
T ss_pred CCHH------H-HHHHHHHHHHHcCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhcCCeE
Confidence 9642 2 2222 2358999999996431 24577789999999999988652 11 24468
Q ss_pred EEEEecceeecCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcHHHHHHH
Q 010075 157 FVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKT 236 (519)
Q Consensus 157 ~V~vSTa~v~~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~Y~~sK~ 236 (519)
+|++||....... .....|+.+|+
T Consensus 131 iv~vsS~~~~~~~--------------------------------------------------------~~~~~Y~~sK~ 154 (239)
T TIGR01831 131 IITLASVSGVMGN--------------------------------------------------------RGQVNYSAAKA 154 (239)
T ss_pred EEEEcchhhccCC--------------------------------------------------------CCCcchHHHHH
Confidence 9999996432211 11245999999
Q ss_pred HHHHHHHHh-----hcCCcEEEEecCccccCCCCCCCcccccccccHHHHHHhhcCCceeeccCCCceeeeeeHHHHHHH
Q 010075 237 MGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNA 311 (519)
Q Consensus 237 ~aE~lv~~~-----~~~lp~~IvRPs~V~g~~~~p~~gw~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~d~vpVDdva~a 311 (519)
..+.+.+.. ..+++++.++||.+.++.....+.+ ........ + ...+...++++++
T Consensus 155 a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~----------~~~~~~~~----~-----~~~~~~~~~va~~ 215 (239)
T TIGR01831 155 GLIGATKALAVELAKRKITVNCIAPGLIDTEMLAEVEHD----------LDEALKTV----P-----MNRMGQPAEVASL 215 (239)
T ss_pred HHHHHHHHHHHHHhHhCeEEEEEEEccCccccchhhhHH----------HHHHHhcC----C-----CCCCCCHHHHHHH
Confidence 887776644 3579999999999877643222111 11111110 0 1123456899999
Q ss_pred HHHHHHHhccCCCCCcEEEecCC
Q 010075 312 MIVAMVAHAKQPSDANIYHVGSS 334 (519)
Q Consensus 312 ii~a~~~~~~~~~~~~iyni~s~ 334 (519)
++.++..... .-.+.+..+.++
T Consensus 216 ~~~l~~~~~~-~~~g~~~~~~gg 237 (239)
T TIGR01831 216 AGFLMSDGAS-YVTRQVISVNGG 237 (239)
T ss_pred HHHHcCchhc-CccCCEEEecCC
Confidence 9998863321 112445555443
|
This model represents a small, very well conserved family of proteins closely related to the FabG family, TIGR01830, and possibly equal in function. In all completed genomes with a member of this family, a FabG in TIGR01830 is also found. |
| >PRK07677 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.49 E-value=7e-13 Score=130.20 Aligned_cols=220 Identities=10% Similarity=0.084 Sum_probs=139.1
Q ss_pred CCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEEe
Q 010075 12 NKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVP 91 (519)
Q Consensus 12 ~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v~ 91 (519)
||+++||||+|+||+++++.|++.| .+|+++.|+... .+++.++ +++. ..++.++.
T Consensus 1 ~k~~lItG~s~giG~~ia~~l~~~G---~~Vi~~~r~~~~---~~~~~~~---------~~~~---------~~~~~~~~ 56 (252)
T PRK07677 1 EKVVIITGGSSGMGKAMAKRFAEEG---ANVVITGRTKEK---LEEAKLE---------IEQF---------PGQVLTVQ 56 (252)
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCC---CEEEEEeCCHHH---HHHHHHH---------HHhc---------CCcEEEEE
Confidence 6899999999999999999999988 578888887421 1222111 1110 24688999
Q ss_pred ccCCCCCCCCChhhhHHHH-------hcCccEEEEcCccCCc-------cccHHHHHHHhHHHHHHHHHHHHhc---c-C
Q 010075 92 GDISSEDLGLKDSNLKEEL-------WNELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKC---V-K 153 (519)
Q Consensus 92 gDl~~~~lgls~~~~~~~l-------~~~vdiViH~Aa~v~f-------~~~~~~~~~~Nv~gt~~ll~~a~~~---~-~ 153 (519)
+|+++++ + .+.+ ..++|+|||+||.... .+.++..+++|+.|+.++++.+.+. + .
T Consensus 57 ~D~~~~~------~-~~~~~~~~~~~~~~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~ 129 (252)
T PRK07677 57 MDVRNPE------D-VQKMVEQIDEKFGRIDALINNAAGNFICPAEDLSVNGWNSVIDIVLNGTFYCSQAVGKYWIEKGI 129 (252)
T ss_pred ecCCCHH------H-HHHHHHHHHHHhCCccEEEECCCCCCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCC
Confidence 9999632 2 2222 2468999999985321 2446778999999999999888431 1 2
Q ss_pred CceEEEEecceeecCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcHHHH
Q 010075 154 LKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVF 233 (519)
Q Consensus 154 l~~~V~vSTa~v~~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~Y~~ 233 (519)
..++|++||.+..... .....|+.
T Consensus 130 ~g~ii~isS~~~~~~~--------------------------------------------------------~~~~~Y~~ 153 (252)
T PRK07677 130 KGNIINMVATYAWDAG--------------------------------------------------------PGVIHSAA 153 (252)
T ss_pred CEEEEEEcChhhccCC--------------------------------------------------------CCCcchHH
Confidence 3689999987543211 11246999
Q ss_pred HHHHHHHHHHHh----h--cCCcEEEEecCccccCCCCCCCcccccccccHHHHHHhhcCCceeeccCCCceeeeeeHHH
Q 010075 234 TKTMGEMLMQQS----K--ENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDM 307 (519)
Q Consensus 234 sK~~aE~lv~~~----~--~~lp~~IvRPs~V~g~~~~p~~gw~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~d~vpVDd 307 (519)
+|+..+.+++.. . .++++..++||.|.++.... ..|.+ ......+.+.. ...-+...+|
T Consensus 154 sKaa~~~~~~~la~e~~~~~gi~v~~v~PG~v~~~~~~~-~~~~~-----~~~~~~~~~~~---------~~~~~~~~~~ 218 (252)
T PRK07677 154 AKAGVLAMTRTLAVEWGRKYGIRVNAIAPGPIERTGGAD-KLWES-----EEAAKRTIQSV---------PLGRLGTPEE 218 (252)
T ss_pred HHHHHHHHHHHHHHHhCcccCeEEEEEeecccccccccc-cccCC-----HHHHHHHhccC---------CCCCCCCHHH
Confidence 999988887753 2 48999999999997542110 01111 11111111110 1112567789
Q ss_pred HHHHHHHHHHHhccCCCCCcEEEecCC
Q 010075 308 VVNAMIVAMVAHAKQPSDANIYHVGSS 334 (519)
Q Consensus 308 va~aii~a~~~~~~~~~~~~iyni~s~ 334 (519)
+++++..++.... ..-.+.++.+.+|
T Consensus 219 va~~~~~l~~~~~-~~~~g~~~~~~gg 244 (252)
T PRK07677 219 IAGLAYFLLSDEA-AYINGTCITMDGG 244 (252)
T ss_pred HHHHHHHHcCccc-cccCCCEEEECCC
Confidence 9998887765321 1223567777665
|
|
| >PRK06079 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.48 E-value=1.8e-12 Score=127.54 Aligned_cols=223 Identities=16% Similarity=0.110 Sum_probs=140.0
Q ss_pred hcCCCEEEEeCCc--cHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCc
Q 010075 9 FLENKTILVSGVT--GFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEK 86 (519)
Q Consensus 9 ~~~~k~VlITGaT--GFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~ 86 (519)
.++||+++||||+ +.||++++++|++.| .+|++..|+.+ ..+.+. ++ ...+
T Consensus 4 ~l~~k~~lItGas~~~gIG~a~a~~la~~G---~~Vi~~~r~~~---~~~~~~-~~--------------------~~~~ 56 (252)
T PRK06079 4 ILSGKKIVVMGVANKRSIAWGCAQAIKDQG---ATVIYTYQNDR---MKKSLQ-KL--------------------VDEE 56 (252)
T ss_pred ccCCCEEEEeCCCCCCchHHHHHHHHHHCC---CEEEEecCchH---HHHHHH-hh--------------------ccCc
Confidence 3679999999999 799999999999998 67888877521 111111 00 0135
Q ss_pred eEEEeccCCCCCCCCChhhhHHHH---hcCccEEEEcCccCC-------c----cccHHHHHHHhHHHHHHHHHHHHh-c
Q 010075 87 ITFVPGDISSEDLGLKDSNLKEEL---WNELDIMVNSAAITK-------F----DERYDVAFGINTLGVIHLVNFAKK-C 151 (519)
Q Consensus 87 v~~v~gDl~~~~lgls~~~~~~~l---~~~vdiViH~Aa~v~-------f----~~~~~~~~~~Nv~gt~~ll~~a~~-~ 151 (519)
+.++.+|++++.- -.+..+.+ ..++|++||+||... + .+.++..+++|+.|+..+.+.+.. +
T Consensus 57 ~~~~~~Dl~~~~~---v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~in~~~~~~l~~~~~~~~ 133 (252)
T PRK06079 57 DLLVECDVASDES---IERAFATIKERVGKIDGIVHAIAYAKKEELGGNVTDTSRDGYALAQDISAYSLIAVAKYARPLL 133 (252)
T ss_pred eeEEeCCCCCHHH---HHHHHHHHHHHhCCCCEEEEcccccccccccCCcccCCHHHHHHHhCcccHHHHHHHHHHHHhc
Confidence 7789999996431 01111122 246999999999642 1 145778899999999988887754 2
Q ss_pred cCCceEEEEecceeecCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcHH
Q 010075 152 VKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTY 231 (519)
Q Consensus 152 ~~l~~~V~vSTa~v~~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~Y 231 (519)
.+-.++|++||....... .....|
T Consensus 134 ~~~g~Iv~iss~~~~~~~--------------------------------------------------------~~~~~Y 157 (252)
T PRK06079 134 NPGASIVTLTYFGSERAI--------------------------------------------------------PNYNVM 157 (252)
T ss_pred ccCceEEEEeccCccccC--------------------------------------------------------Ccchhh
Confidence 233578999875432100 123569
Q ss_pred HHHHHHHHHHHHHh-----hcCCcEEEEecCccccCCCCCCCcccccccccHHHHHHhhcCCceeeccCCCceeeeeeHH
Q 010075 232 VFTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVD 306 (519)
Q Consensus 232 ~~sK~~aE~lv~~~-----~~~lp~~IvRPs~V~g~~~~p~~gw~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~d~vpVD 306 (519)
+.||+..+.+.+.. ..++.+..+.||.|-.+.... +. ............ .+ ...+...+
T Consensus 158 ~asKaal~~l~~~la~el~~~gI~vn~i~PG~v~T~~~~~---~~----~~~~~~~~~~~~----~p-----~~r~~~pe 221 (252)
T PRK06079 158 GIAKAALESSVRYLARDLGKKGIRVNAISAGAVKTLAVTG---IK----GHKDLLKESDSR----TV-----DGVGVTIE 221 (252)
T ss_pred HHHHHHHHHHHHHHHHHhhhcCcEEEEEecCccccccccc---CC----ChHHHHHHHHhc----Cc-----ccCCCCHH
Confidence 99999999888754 357999999999986653211 10 011111111111 01 12356679
Q ss_pred HHHHHHHHHHHHhccCCCCCcEEEecCC
Q 010075 307 MVVNAMIVAMVAHAKQPSDANIYHVGSS 334 (519)
Q Consensus 307 dva~aii~a~~~~~~~~~~~~iyni~s~ 334 (519)
|||+++..++..... .-.+++..+.+|
T Consensus 222 dva~~~~~l~s~~~~-~itG~~i~vdgg 248 (252)
T PRK06079 222 EVGNTAAFLLSDLST-GVTGDIIYVDKG 248 (252)
T ss_pred HHHHHHHHHhCcccc-cccccEEEeCCc
Confidence 999999988854322 112456655544
|
|
| >PRK07791 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.47 E-value=1.9e-12 Score=129.85 Aligned_cols=226 Identities=16% Similarity=0.176 Sum_probs=138.7
Q ss_pred hcCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCC------cccHHHHHHHHHhhhhhHHHHHhhhccccccc
Q 010075 9 FLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAAD------IDSAALRFQNEVLAKDVFNVLKEKWGTRLNSF 82 (519)
Q Consensus 9 ~~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~------~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~ 82 (519)
.++||+++||||+|.||++++++|++.| .+|+++.|+.. .....+.+.++ +++.
T Consensus 3 ~l~~k~~lITGas~GIG~aia~~la~~G---~~vii~~~~~~~~~~~~~~~~~~~~~~~---------l~~~-------- 62 (286)
T PRK07791 3 LLDGRVVIVTGAGGGIGRAHALAFAAEG---ARVVVNDIGVGLDGSASGGSAAQAVVDE---------IVAA-------- 62 (286)
T ss_pred ccCCCEEEEECCCchHHHHHHHHHHHCC---CEEEEeeCCccccccccchhHHHHHHHH---------HHhc--------
Confidence 4679999999999999999999999998 56777776541 11112222111 1110
Q ss_pred cCCceEEEeccCCCCCCCCChhhhHHHH---hcCccEEEEcCccCCc-------cccHHHHHHHhHHHHHHHHHHHHhc-
Q 010075 83 ISEKITFVPGDISSEDLGLKDSNLKEEL---WNELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKC- 151 (519)
Q Consensus 83 ~~~~v~~v~gDl~~~~lgls~~~~~~~l---~~~vdiViH~Aa~v~f-------~~~~~~~~~~Nv~gt~~ll~~a~~~- 151 (519)
..++.++.+|+++++. -.+..+.+ ..++|++||+||.... .+.++..+++|+.|+..+++.+...
T Consensus 63 -~~~~~~~~~Dv~~~~~---v~~~~~~~~~~~g~id~lv~nAG~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~ 138 (286)
T PRK07791 63 -GGEAVANGDDIADWDG---AANLVDAAVETFGGLDVLVNNAGILRDRMIANMSEEEWDAVIAVHLKGHFATLRHAAAYW 138 (286)
T ss_pred -CCceEEEeCCCCCHHH---HHHHHHHHHHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHH
Confidence 2467889999996421 01111122 2469999999997532 2567888999999998888776421
Q ss_pred c-C-------CceEEEEecceeecCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccc
Q 010075 152 V-K-------LKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAK 223 (519)
Q Consensus 152 ~-~-------l~~~V~vSTa~v~~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~ 223 (519)
. . -.++|++||.......
T Consensus 139 ~~~~~~~~~~~g~Iv~isS~~~~~~~------------------------------------------------------ 164 (286)
T PRK07791 139 RAESKAGRAVDARIINTSSGAGLQGS------------------------------------------------------ 164 (286)
T ss_pred HHhcccCCCCCcEEEEeCchhhCcCC------------------------------------------------------
Confidence 0 1 2479999986432211
Q ss_pred cCCCCcHHHHHHHHHHHHHHHh-----hcCCcEEEEecCccccCCCCCCCcccccccccHHHHHHhhcCCceeeccCCCc
Q 010075 224 LHGWPNTYVFTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKV 298 (519)
Q Consensus 224 ~~~~~n~Y~~sK~~aE~lv~~~-----~~~lp~~IvRPs~V~g~~~~p~~gw~~~~~~~~~~i~~~~~g~~~~~~~~~~~ 298 (519)
.....|+.||+..+.+.+.. ..++.+..+.|+ +..+..+ ......... . +..
T Consensus 165 --~~~~~Y~asKaal~~l~~~la~el~~~gIrVn~v~Pg-~~T~~~~-------------~~~~~~~~~-----~--~~~ 221 (286)
T PRK07791 165 --VGQGNYSAAKAGIAALTLVAAAELGRYGVTVNAIAPA-ARTRMTE-------------TVFAEMMAK-----P--EEG 221 (286)
T ss_pred --CCchhhHHHHHHHHHHHHHHHHHHHHhCeEEEEECCC-CCCCcch-------------hhHHHHHhc-----C--ccc
Confidence 11246999999998887754 357999999998 4221110 000000000 0 011
Q ss_pred eeeeeeHHHHHHHHHHHHHHhccCCCCCcEEEecCCCC
Q 010075 299 IMDVIPVDMVVNAMIVAMVAHAKQPSDANIYHVGSSLR 336 (519)
Q Consensus 299 ~~d~vpVDdva~aii~a~~~~~~~~~~~~iyni~s~~~ 336 (519)
.......+|++++++.++..... .-.++++.+.+|..
T Consensus 222 ~~~~~~pedva~~~~~L~s~~~~-~itG~~i~vdgG~~ 258 (286)
T PRK07791 222 EFDAMAPENVSPLVVWLGSAESR-DVTGKVFEVEGGKI 258 (286)
T ss_pred ccCCCCHHHHHHHHHHHhCchhc-CCCCcEEEEcCCce
Confidence 11245689999999988753322 22367777766633
|
|
| >PRK12859 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.47 E-value=3.3e-12 Score=125.91 Aligned_cols=226 Identities=15% Similarity=0.104 Sum_probs=136.0
Q ss_pred cCCCEEEEeCCcc--HHHHHHHHHHHHhCCCccEEEEEEecCCc--------ccHHHHHHHHHhhhhhHHHHHhhhcccc
Q 010075 10 LENKTILVSGVTG--FVAKVFIEKILRVQPNVKKLYLFVRAADI--------DSAALRFQNEVLAKDVFNVLKEKWGTRL 79 (519)
Q Consensus 10 ~~~k~VlITGaTG--FlG~~Lv~~LL~~g~~v~~V~~LvR~~~~--------~~~~~rl~~~~~~~~~f~~l~~~~~~~~ 79 (519)
++||+|+|||||| .||++++++|++.| .+|++..|.... ....+++.+ .+++
T Consensus 4 l~~k~vlVtGas~~~giG~~~a~~l~~~G---~~vi~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~------ 65 (256)
T PRK12859 4 LKNKVAVVTGVSRLDGIGAAICKELAEAG---ADIFFTYWTAYDKEMPWGVDQDEQIQLQE---------ELLK------ 65 (256)
T ss_pred cCCcEEEEECCCCCCChHHHHHHHHHHCC---CeEEEEecccccccccccccHHHHHHHHH---------HHHh------
Confidence 6789999999995 79999999999998 567776543211 011111111 1111
Q ss_pred ccccCCceEEEeccCCCCCCCCChhhhHHHHhcCccEEEEcCccCCc-------cccHHHHHHHhHHHHHHHHHHHH-hc
Q 010075 80 NSFISEKITFVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAK-KC 151 (519)
Q Consensus 80 ~~~~~~~v~~v~gDl~~~~lgls~~~~~~~l~~~vdiViH~Aa~v~f-------~~~~~~~~~~Nv~gt~~ll~~a~-~~ 151 (519)
...++.++.+|+++++--....+...+....+|+|||+|+.... .+.++..+++|+.|...+...+. .+
T Consensus 66 ---~g~~~~~~~~D~~~~~~i~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~ 142 (256)
T PRK12859 66 ---NGVKVSSMELDLTQNDAPKELLNKVTEQLGYPHILVNNAAYSTNNDFSNLTAEELDKHYMVNVRATTLLSSQFARGF 142 (256)
T ss_pred ---cCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHH
Confidence 12468899999996421000000011112358999999997532 13567789999999888854442 22
Q ss_pred --cCCceEEEEecceeecCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCc
Q 010075 152 --VKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPN 229 (519)
Q Consensus 152 --~~l~~~V~vSTa~v~~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n 229 (519)
.+-.++|++||....... .+..
T Consensus 143 ~~~~~g~iv~isS~~~~~~~--------------------------------------------------------~~~~ 166 (256)
T PRK12859 143 DKKSGGRIINMTSGQFQGPM--------------------------------------------------------VGEL 166 (256)
T ss_pred hhcCCeEEEEEcccccCCCC--------------------------------------------------------CCch
Confidence 134689999997532110 2245
Q ss_pred HHHHHHHHHHHHHHHh-----hcCCcEEEEecCccccCCCCCCCcccccccccHHHHHHhhcCCceeeccCCCceeeeee
Q 010075 230 TYVFTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIP 304 (519)
Q Consensus 230 ~Y~~sK~~aE~lv~~~-----~~~lp~~IvRPs~V~g~~~~p~~gw~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~d~vp 304 (519)
.|+.+|+..+.+.+.. ..++.++.++||.|-.+... ......+. .. . ....+..
T Consensus 167 ~Y~~sK~a~~~l~~~la~~~~~~~i~v~~v~PG~i~t~~~~------------~~~~~~~~-~~---~-----~~~~~~~ 225 (256)
T PRK12859 167 AYAATKGAIDALTSSLAAEVAHLGITVNAINPGPTDTGWMT------------EEIKQGLL-PM---F-----PFGRIGE 225 (256)
T ss_pred HHHHHHHHHHHHHHHHHHHhhhhCeEEEEEEEccccCCCCC------------HHHHHHHH-hc---C-----CCCCCcC
Confidence 7999999999998765 35799999999987654211 00111111 00 0 1112456
Q ss_pred HHHHHHHHHHHHHHhccCCCCCcEEEecCC
Q 010075 305 VDMVVNAMIVAMVAHAKQPSDANIYHVGSS 334 (519)
Q Consensus 305 VDdva~aii~a~~~~~~~~~~~~iyni~s~ 334 (519)
.+|+|++++.++.... ..-.++++.+.+|
T Consensus 226 ~~d~a~~~~~l~s~~~-~~~~G~~i~~dgg 254 (256)
T PRK12859 226 PKDAARLIKFLASEEA-EWITGQIIHSEGG 254 (256)
T ss_pred HHHHHHHHHHHhCccc-cCccCcEEEeCCC
Confidence 7999999988775322 2223566666554
|
|
| >PRK08936 glucose-1-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.47 E-value=1.8e-12 Score=128.04 Aligned_cols=222 Identities=13% Similarity=0.117 Sum_probs=135.4
Q ss_pred cCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 010075 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (519)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (519)
+++|+++||||+|+||+++++.|++.| .+|++..|+... ..+.+.++ ++.. ..++.+
T Consensus 5 ~~~k~~lItGa~~gIG~~ia~~l~~~G---~~vvi~~~~~~~--~~~~~~~~---------l~~~---------~~~~~~ 61 (261)
T PRK08936 5 LEGKVVVITGGSTGLGRAMAVRFGKEK---AKVVINYRSDEE--EANDVAEE---------IKKA---------GGEAIA 61 (261)
T ss_pred CCCCEEEEeCCCChHHHHHHHHHHHCC---CEEEEEeCCCHH--HHHHHHHH---------HHHc---------CCeEEE
Confidence 578999999999999999999999988 567777774321 11111111 1110 246778
Q ss_pred EeccCCCCCCCCChhhhHHHHh-------cCccEEEEcCccCCc-------cccHHHHHHHhHHHHHHHHH----HHHhc
Q 010075 90 VPGDISSEDLGLKDSNLKEELW-------NELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVN----FAKKC 151 (519)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~-------~~vdiViH~Aa~v~f-------~~~~~~~~~~Nv~gt~~ll~----~a~~~ 151 (519)
+.+|++++. + ...++ ..+|++||+|+.... .+.++..+++|+.++..+++ .+++.
T Consensus 62 ~~~Dl~~~~------~-i~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~l~~~~~~ 134 (261)
T PRK08936 62 VKGDVTVES------D-VVNLIQTAVKEFGTLDVMINNAGIENAVPSHEMSLEDWNKVINTNLTGAFLGSREAIKYFVEH 134 (261)
T ss_pred EEecCCCHH------H-HHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc
Confidence 999999632 2 22222 368999999997432 14566779999988766554 44443
Q ss_pred cCCceEEEEecceeecCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcHH
Q 010075 152 VKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTY 231 (519)
Q Consensus 152 ~~l~~~V~vSTa~v~~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~Y 231 (519)
+.-.++|++||....... +....|
T Consensus 135 ~~~g~iv~~sS~~~~~~~--------------------------------------------------------~~~~~Y 158 (261)
T PRK08936 135 DIKGNIINMSSVHEQIPW--------------------------------------------------------PLFVHY 158 (261)
T ss_pred CCCcEEEEEccccccCCC--------------------------------------------------------CCCccc
Confidence 224689999996432110 223579
Q ss_pred HHHHHHHHHHHHHh-----hcCCcEEEEecCccccCCCCCCCcccccccccHHHHHHhhcCCceeeccCCCceeeeeeHH
Q 010075 232 VFTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVD 306 (519)
Q Consensus 232 ~~sK~~aE~lv~~~-----~~~lp~~IvRPs~V~g~~~~p~~gw~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~d~vpVD 306 (519)
+.+|+..+.+.+.. ..++.++.++||.|-++..... +... ......... . ....+...+
T Consensus 159 ~~sKaa~~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~------~~~~-~~~~~~~~~-~--------~~~~~~~~~ 222 (261)
T PRK08936 159 AASKGGVKLMTETLAMEYAPKGIRVNNIGPGAINTPINAEK------FADP-KQRADVESM-I--------PMGYIGKPE 222 (261)
T ss_pred HHHHHHHHHHHHHHHHHHhhcCeEEEEEEECcCCCCccccc------cCCH-HHHHHHHhc-C--------CCCCCcCHH
Confidence 99997776666543 4579999999999877643210 0001 111111111 0 112356678
Q ss_pred HHHHHHHHHHHHhccCCCCCcEEEecCC
Q 010075 307 MVVNAMIVAMVAHAKQPSDANIYHVGSS 334 (519)
Q Consensus 307 dva~aii~a~~~~~~~~~~~~iyni~s~ 334 (519)
++++++..++..... .-.+.++.+.++
T Consensus 223 ~va~~~~~l~s~~~~-~~~G~~i~~d~g 249 (261)
T PRK08936 223 EIAAVAAWLASSEAS-YVTGITLFADGG 249 (261)
T ss_pred HHHHHHHHHcCcccC-CccCcEEEECCC
Confidence 999999888764322 123455666554
|
|
| >PRK06484 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.47 E-value=1.5e-12 Score=141.65 Aligned_cols=224 Identities=15% Similarity=0.194 Sum_probs=144.9
Q ss_pred hcCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceE
Q 010075 9 FLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKIT 88 (519)
Q Consensus 9 ~~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~ 88 (519)
...||+++||||+|+||+++++.|++.| .+|+++.|+.. ..+.+. ++. ..++.
T Consensus 266 ~~~~k~~lItGas~gIG~~~a~~l~~~G---~~V~~~~r~~~---~~~~~~-------------~~~--------~~~~~ 318 (520)
T PRK06484 266 AESPRVVAITGGARGIGRAVADRFAAAG---DRLLIIDRDAE---GAKKLA-------------EAL--------GDEHL 318 (520)
T ss_pred ccCCCEEEEECCCcHHHHHHHHHHHHCC---CEEEEEeCCHH---HHHHHH-------------HHh--------CCcee
Confidence 4578999999999999999999999998 57888888632 112221 111 24567
Q ss_pred EEeccCCCCCCCCChhhhHHHH---hcCccEEEEcCccCCc--------cccHHHHHHHhHHHHHHHHHHHHh-ccCCce
Q 010075 89 FVPGDISSEDLGLKDSNLKEEL---WNELDIMVNSAAITKF--------DERYDVAFGINTLGVIHLVNFAKK-CVKLKV 156 (519)
Q Consensus 89 ~v~gDl~~~~lgls~~~~~~~l---~~~vdiViH~Aa~v~f--------~~~~~~~~~~Nv~gt~~ll~~a~~-~~~l~~ 156 (519)
.+.+|+++++. -....+.+ ...+|++||+||.... .+.++..+++|+.|+..+++.+.. +.+-.+
T Consensus 319 ~~~~D~~~~~~---~~~~~~~~~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~g~ 395 (520)
T PRK06484 319 SVQADITDEAA---VESAFAQIQARWGRLDVLVNNAGIAEVFKPSLEQSAEDFTRVYDVNLSGAFACARAAARLMSQGGV 395 (520)
T ss_pred EEEccCCCHHH---HHHHHHHHHHHcCCCCEEEECCCCcCCCCChhhCCHHHHHHHHHhCcHHHHHHHHHHHHHhccCCE
Confidence 78999996421 01111111 2459999999997521 145678899999999999888764 333468
Q ss_pred EEEEecceeecCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcHHHHHHH
Q 010075 157 FVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKT 236 (519)
Q Consensus 157 ~V~vSTa~v~~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~Y~~sK~ 236 (519)
+|++||....... .....|+.||+
T Consensus 396 iv~isS~~~~~~~--------------------------------------------------------~~~~~Y~asKa 419 (520)
T PRK06484 396 IVNLGSIASLLAL--------------------------------------------------------PPRNAYCASKA 419 (520)
T ss_pred EEEECchhhcCCC--------------------------------------------------------CCCchhHHHHH
Confidence 9999997654211 12357999999
Q ss_pred HHHHHHHHh-----hcCCcEEEEecCccccCCCCCCCcccccccccHHHHHHhhcCCceeeccCCCceeeeeeHHHHHHH
Q 010075 237 MGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNA 311 (519)
Q Consensus 237 ~aE~lv~~~-----~~~lp~~IvRPs~V~g~~~~p~~gw~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~d~vpVDdva~a 311 (519)
..+.+++.. ..++++..+.||.|.++...... .. . ........+.. + ...+..++|+|++
T Consensus 420 al~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~---~~--~-~~~~~~~~~~~----~-----~~~~~~~~dia~~ 484 (520)
T PRK06484 420 AVTMLSRSLACEWAPAGIRVNTVAPGYIETPAVLALK---AS--G-RADFDSIRRRI----P-----LGRLGDPEEVAEA 484 (520)
T ss_pred HHHHHHHHHHHHhhhhCeEEEEEEeCCccCchhhhhc---cc--c-HHHHHHHHhcC----C-----CCCCcCHHHHHHH
Confidence 999888765 34799999999999775431110 00 0 00011111110 1 1124678999999
Q ss_pred HHHHHHHhccCCCCCcEEEecCC
Q 010075 312 MIVAMVAHAKQPSDANIYHVGSS 334 (519)
Q Consensus 312 ii~a~~~~~~~~~~~~iyni~s~ 334 (519)
++.++.... ..-.++++.+.+|
T Consensus 485 ~~~l~s~~~-~~~~G~~i~vdgg 506 (520)
T PRK06484 485 IAFLASPAA-SYVNGATLTVDGG 506 (520)
T ss_pred HHHHhCccc-cCccCcEEEECCC
Confidence 998875322 2224678888766
|
|
| >PRK06953 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.46 E-value=6.7e-12 Score=120.88 Aligned_cols=197 Identities=15% Similarity=0.154 Sum_probs=133.1
Q ss_pred CEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEEec
Q 010075 13 KTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVPG 92 (519)
Q Consensus 13 k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v~g 92 (519)
++++||||||+||+++++.|++.| .+|+++.|+... .+++. ...++++.+
T Consensus 2 ~~vlvtG~sg~iG~~la~~L~~~G---~~v~~~~r~~~~---~~~~~------------------------~~~~~~~~~ 51 (222)
T PRK06953 2 KTVLIVGASRGIGREFVRQYRADG---WRVIATARDAAA---LAALQ------------------------ALGAEALAL 51 (222)
T ss_pred ceEEEEcCCCchhHHHHHHHHhCC---CEEEEEECCHHH---HHHHH------------------------hccceEEEe
Confidence 689999999999999999999887 578888886422 12221 123567899
Q ss_pred cCCCCCCCCChhhhHHHH---h--cCccEEEEcCccCCc---------cccHHHHHHHhHHHHHHHHHHHHhc--cCCce
Q 010075 93 DISSEDLGLKDSNLKEEL---W--NELDIMVNSAAITKF---------DERYDVAFGINTLGVIHLVNFAKKC--VKLKV 156 (519)
Q Consensus 93 Dl~~~~lgls~~~~~~~l---~--~~vdiViH~Aa~v~f---------~~~~~~~~~~Nv~gt~~ll~~a~~~--~~l~~ 156 (519)
|+++++ ..+.+ . .++|+|||+|+.... .+.++..+++|+.|+.++++.+.+. ..-.+
T Consensus 52 D~~~~~-------~v~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~ 124 (222)
T PRK06953 52 DVADPA-------SVAGLAWKLDGEALDAAVYVAGVYGPRTEGVEPITREDFDAVMHTNVLGPMQLLPILLPLVEAAGGV 124 (222)
T ss_pred cCCCHH-------HHHHHHHHhcCCCCCEEEECCCcccCCCCCcccCCHHHHHHHHhhhhhhHHHHHHHHHHhhhccCCe
Confidence 999642 22232 2 259999999997521 2456788999999999999988652 12346
Q ss_pred EEEEeccee-ecCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcHHHHHH
Q 010075 157 FVHVSTAYV-AGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTK 235 (519)
Q Consensus 157 ~V~vSTa~v-~~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~Y~~sK 235 (519)
++++||... ++... . .....|+.+|
T Consensus 125 iv~isS~~~~~~~~~-------~-----------------------------------------------~~~~~Y~~sK 150 (222)
T PRK06953 125 LAVLSSRMGSIGDAT-------G-----------------------------------------------TTGWLYRASK 150 (222)
T ss_pred EEEEcCccccccccc-------C-----------------------------------------------CCccccHHhH
Confidence 888888643 32110 0 1123599999
Q ss_pred HHHHHHHHHh---hcCCcEEEEecCccccCCCCCCCcccccccccHHHHHHhhcCCceeeccCCCceeeeeeHHHHHHHH
Q 010075 236 TMGEMLMQQS---KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAM 312 (519)
Q Consensus 236 ~~aE~lv~~~---~~~lp~~IvRPs~V~g~~~~p~~gw~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~d~vpVDdva~ai 312 (519)
...+.+++.. ..++++..++||.+..+... + ...+..++++..+
T Consensus 151 ~a~~~~~~~~~~~~~~i~v~~v~Pg~i~t~~~~-----------------------------~----~~~~~~~~~~~~~ 197 (222)
T PRK06953 151 AALNDALRAASLQARHATCIALHPGWVRTDMGG-----------------------------A----QAALDPAQSVAGM 197 (222)
T ss_pred HHHHHHHHHHhhhccCcEEEEECCCeeecCCCC-----------------------------C----CCCCCHHHHHHHH
Confidence 9999998876 34688999999887664321 0 0125667888888
Q ss_pred HHHHHHhccCCCCCcEEEecCC
Q 010075 313 IVAMVAHAKQPSDANIYHVGSS 334 (519)
Q Consensus 313 i~a~~~~~~~~~~~~iyni~s~ 334 (519)
+.++..... ...+..|+..++
T Consensus 198 ~~~~~~~~~-~~~~~~~~~~~~ 218 (222)
T PRK06953 198 RRVIAQATR-RDNGRFFQYDGV 218 (222)
T ss_pred HHHHHhcCc-ccCceEEeeCCc
Confidence 888765432 334667766543
|
|
| >PRK07062 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.46 E-value=1.7e-12 Score=128.40 Aligned_cols=175 Identities=14% Similarity=0.112 Sum_probs=115.2
Q ss_pred cCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 010075 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (519)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (519)
++||+++||||+|+||+++++.|++.| .+|+++.|+.... +... +.+.++.+ ..++.+
T Consensus 6 l~~k~~lItGas~giG~~ia~~l~~~G---~~V~~~~r~~~~~---~~~~---------~~~~~~~~-------~~~~~~ 63 (265)
T PRK07062 6 LEGRVAVVTGGSSGIGLATVELLLEAG---ASVAICGRDEERL---ASAE---------ARLREKFP-------GARLLA 63 (265)
T ss_pred cCCCEEEEeCCCchHHHHHHHHHHHCC---CeEEEEeCCHHHH---HHHH---------HHHHhhCC-------CceEEE
Confidence 578999999999999999999999988 5788888864321 1111 11122211 146788
Q ss_pred EeccCCCCCCCCChhhhHHHHhcCccEEEEcCccCCc-------cccHHHHHHHhHHHHHHHHHHHHh-c--cCCceEEE
Q 010075 90 VPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKK-C--VKLKVFVH 159 (519)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~~~vdiViH~Aa~v~f-------~~~~~~~~~~Nv~gt~~ll~~a~~-~--~~l~~~V~ 159 (519)
+.+|+++++-.....+........+|++||+||.... .+.+...+++|+.+...+++.+.. + .+..++|+
T Consensus 64 ~~~D~~~~~~v~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~ 143 (265)
T PRK07062 64 ARCDVLDEADVAAFAAAVEARFGGVDMLVNNAGQGRVSTFADTTDDAWRDELELKYFSVINPTRAFLPLLRASAAASIVC 143 (265)
T ss_pred EEecCCCHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhccCCcEEEE
Confidence 9999996321000000001122468999999997532 235777889999887777665532 1 23468999
Q ss_pred EecceeecCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcHHHHHHHHHH
Q 010075 160 VSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGE 239 (519)
Q Consensus 160 vSTa~v~~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~Y~~sK~~aE 239 (519)
+||....... .....|+.+|+..+
T Consensus 144 isS~~~~~~~--------------------------------------------------------~~~~~y~asKaal~ 167 (265)
T PRK07062 144 VNSLLALQPE--------------------------------------------------------PHMVATSAARAGLL 167 (265)
T ss_pred eccccccCCC--------------------------------------------------------CCchHhHHHHHHHH
Confidence 9997543211 11245888998877
Q ss_pred HHHHHh-----hcCCcEEEEecCccccC
Q 010075 240 MLMQQS-----KENLSLVIIRPTVVSGT 262 (519)
Q Consensus 240 ~lv~~~-----~~~lp~~IvRPs~V~g~ 262 (519)
.+.+.. ..++++..+.||.|-.+
T Consensus 168 ~~~~~la~e~~~~gi~v~~i~PG~v~t~ 195 (265)
T PRK07062 168 NLVKSLATELAPKGVRVNSILLGLVESG 195 (265)
T ss_pred HHHHHHHHHhhhcCeEEEEEecCccccc
Confidence 776643 45799999999998664
|
|
| >PRK07578 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.46 E-value=3.8e-12 Score=120.48 Aligned_cols=184 Identities=18% Similarity=0.300 Sum_probs=125.8
Q ss_pred CEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEEec
Q 010075 13 KTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVPG 92 (519)
Q Consensus 13 k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v~g 92 (519)
|+++||||+|+||+++++.|.+. .+|+++.|+.. .+.+
T Consensus 1 ~~vlItGas~giG~~la~~l~~~----~~vi~~~r~~~--------------------------------------~~~~ 38 (199)
T PRK07578 1 MKILVIGASGTIGRAVVAELSKR----HEVITAGRSSG--------------------------------------DVQV 38 (199)
T ss_pred CeEEEEcCCcHHHHHHHHHHHhc----CcEEEEecCCC--------------------------------------ceEe
Confidence 47999999999999999999875 46788877531 2478
Q ss_pred cCCCCCCCCChhhhHHHHh---cCccEEEEcCccCCc-------cccHHHHHHHhHHHHHHHHHHHHh-ccCCceEEEEe
Q 010075 93 DISSEDLGLKDSNLKEELW---NELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKK-CVKLKVFVHVS 161 (519)
Q Consensus 93 Dl~~~~lgls~~~~~~~l~---~~vdiViH~Aa~v~f-------~~~~~~~~~~Nv~gt~~ll~~a~~-~~~l~~~V~vS 161 (519)
|++++ +..+.++ .++|+|||+||...+ .+.+...+++|+.|+.++++.+.+ +.+...++++|
T Consensus 39 D~~~~-------~~~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~is 111 (199)
T PRK07578 39 DITDP-------ASIRALFEKVGKVDAVVSAAGKVHFAPLAEMTDEDFNVGLQSKLMGQVNLVLIGQHYLNDGGSFTLTS 111 (199)
T ss_pred cCCCh-------HHHHHHHHhcCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCeEEEEc
Confidence 99853 2223333 379999999997532 245777789999999999998764 22345789988
Q ss_pred cceeecCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcHHHHHHHHHHHH
Q 010075 162 TAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEML 241 (519)
Q Consensus 162 Ta~v~~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~Y~~sK~~aE~l 241 (519)
|....... +....|+.||+..+.+
T Consensus 112 s~~~~~~~--------------------------------------------------------~~~~~Y~~sK~a~~~~ 135 (199)
T PRK07578 112 GILSDEPI--------------------------------------------------------PGGASAATVNGALEGF 135 (199)
T ss_pred ccccCCCC--------------------------------------------------------CCchHHHHHHHHHHHH
Confidence 76532110 1234799999998888
Q ss_pred HHHh----hcCCcEEEEecCccccCCCCCCCcccccccccHHHHHHhhcCCceeeccCCCceeeeeeHHHHHHHHHHHHH
Q 010075 242 MQQS----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMIVAMV 317 (519)
Q Consensus 242 v~~~----~~~lp~~IvRPs~V~g~~~~p~~gw~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~d~vpVDdva~aii~a~~ 317 (519)
.+.. ..++.+..+.||.+-.+... . +. .+++ ...++.+++|++++.++.
T Consensus 136 ~~~la~e~~~gi~v~~i~Pg~v~t~~~~------------------~--~~--~~~~-----~~~~~~~~~a~~~~~~~~ 188 (199)
T PRK07578 136 VKAAALELPRGIRINVVSPTVLTESLEK------------------Y--GP--FFPG-----FEPVPAARVALAYVRSVE 188 (199)
T ss_pred HHHHHHHccCCeEEEEEcCCcccCchhh------------------h--hh--cCCC-----CCCCCHHHHHHHHHHHhc
Confidence 7754 34788999999877432110 0 00 0111 235899999999988886
Q ss_pred HhccCCCCCcEEEec
Q 010075 318 AHAKQPSDANIYHVG 332 (519)
Q Consensus 318 ~~~~~~~~~~iyni~ 332 (519)
.. ..+++++++
T Consensus 189 ~~----~~g~~~~~~ 199 (199)
T PRK07578 189 GA----QTGEVYKVG 199 (199)
T ss_pred cc----eeeEEeccC
Confidence 32 235677653
|
|
| >PRK08159 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.46 E-value=2.4e-12 Score=128.17 Aligned_cols=227 Identities=13% Similarity=0.129 Sum_probs=140.3
Q ss_pred hhhcCCCEEEEeCCc--cHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccC
Q 010075 7 VEFLENKTILVSGVT--GFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFIS 84 (519)
Q Consensus 7 ~~~~~~k~VlITGaT--GFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~ 84 (519)
...++||+++||||+ +.||.++++.|++.| .+|++..|+.. ..++++ + +.++.
T Consensus 5 ~~~~~~k~~lItGas~~~GIG~aia~~la~~G---~~V~l~~r~~~---~~~~~~-~---------l~~~~--------- 59 (272)
T PRK08159 5 SGLMAGKRGLILGVANNRSIAWGIAKACRAAG---AELAFTYQGDA---LKKRVE-P---------LAAEL--------- 59 (272)
T ss_pred cccccCCEEEEECCCCCCcHHHHHHHHHHHCC---CEEEEEcCchH---HHHHHH-H---------HHHhc---------
Confidence 356789999999997 899999999999998 57777766422 122222 1 11111
Q ss_pred CceEEEeccCCCCCCCCChhhhHHHH---hcCccEEEEcCccCCc-----------cccHHHHHHHhHHHHHHHHHHHHh
Q 010075 85 EKITFVPGDISSEDLGLKDSNLKEEL---WNELDIMVNSAAITKF-----------DERYDVAFGINTLGVIHLVNFAKK 150 (519)
Q Consensus 85 ~~v~~v~gDl~~~~lgls~~~~~~~l---~~~vdiViH~Aa~v~f-----------~~~~~~~~~~Nv~gt~~ll~~a~~ 150 (519)
.....+.+|+++++- -....+.+ ..++|++||+||.... .+.++..+++|+.|+..+++.+..
T Consensus 60 ~~~~~~~~Dl~~~~~---v~~~~~~~~~~~g~iD~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~ 136 (272)
T PRK08159 60 GAFVAGHCDVTDEAS---IDAVFETLEKKWGKLDFVVHAIGFSDKDELTGRYVDTSRDNFTMTMDISVYSFTAVAQRAEK 136 (272)
T ss_pred CCceEEecCCCCHHH---HHHHHHHHHHhcCCCcEEEECCcccCccccccCcccCCHHHHHHHHhHHHHHHHHHHHHHHH
Confidence 224578999996421 11111112 2469999999997531 145788899999999999988765
Q ss_pred -ccCCceEEEEecceeecCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCc
Q 010075 151 -CVKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPN 229 (519)
Q Consensus 151 -~~~l~~~V~vSTa~v~~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n 229 (519)
+.+-.++|++||..... +. +...
T Consensus 137 ~~~~~g~Iv~iss~~~~~---------~~-----------------------------------------------p~~~ 160 (272)
T PRK08159 137 LMTDGGSILTLTYYGAEK---------VM-----------------------------------------------PHYN 160 (272)
T ss_pred hcCCCceEEEEecccccc---------CC-----------------------------------------------Ccch
Confidence 33336889998753211 00 1234
Q ss_pred HHHHHHHHHHHHHHHh-----hcCCcEEEEecCccccCCCCCCCcccccccccHHHHHHhhcCCceeeccCCCceeeeee
Q 010075 230 TYVFTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIP 304 (519)
Q Consensus 230 ~Y~~sK~~aE~lv~~~-----~~~lp~~IvRPs~V~g~~~~p~~gw~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~d~vp 304 (519)
.|+.||+..+.+.+.. ..++.+..+.||.|........+. ... ........ .+ ...+..
T Consensus 161 ~Y~asKaal~~l~~~la~el~~~gIrVn~v~PG~v~T~~~~~~~~-------~~~-~~~~~~~~---~p-----~~r~~~ 224 (272)
T PRK08159 161 VMGVAKAALEASVKYLAVDLGPKNIRVNAISAGPIKTLAASGIGD-------FRY-ILKWNEYN---AP-----LRRTVT 224 (272)
T ss_pred hhhhHHHHHHHHHHHHHHHhcccCeEEEEeecCCcCCHHHhcCCc-------chH-HHHHHHhC---Cc-----ccccCC
Confidence 6999999988888754 457999999999886643211110 000 00000000 01 112467
Q ss_pred HHHHHHHHHHHHHHhccCCCCCcEEEecCC
Q 010075 305 VDMVVNAMIVAMVAHAKQPSDANIYHVGSS 334 (519)
Q Consensus 305 VDdva~aii~a~~~~~~~~~~~~iyni~s~ 334 (519)
.+|+|++++.++.... ..-.+.++.+.+|
T Consensus 225 peevA~~~~~L~s~~~-~~itG~~i~vdgG 253 (272)
T PRK08159 225 IEEVGDSALYLLSDLS-RGVTGEVHHVDSG 253 (272)
T ss_pred HHHHHHHHHHHhCccc-cCccceEEEECCC
Confidence 7999999998886322 2223567777665
|
|
| >PRK07023 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.46 E-value=7.6e-13 Score=129.18 Aligned_cols=158 Identities=16% Similarity=0.182 Sum_probs=113.3
Q ss_pred CEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEEec
Q 010075 13 KTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVPG 92 (519)
Q Consensus 13 k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v~g 92 (519)
++|+||||||+||++++++|++.| .+|+++.|+.... +. .. ...++.++.+
T Consensus 2 ~~vlItGasggiG~~ia~~l~~~G---~~v~~~~r~~~~~-----~~-------------~~--------~~~~~~~~~~ 52 (243)
T PRK07023 2 VRAIVTGHSRGLGAALAEQLLQPG---IAVLGVARSRHPS-----LA-------------AA--------AGERLAEVEL 52 (243)
T ss_pred ceEEEecCCcchHHHHHHHHHhCC---CEEEEEecCcchh-----hh-------------hc--------cCCeEEEEEe
Confidence 589999999999999999999988 5788888875321 00 00 1246889999
Q ss_pred cCCCCCCCCChhhhHHH-----Hh------cCccEEEEcCccCCc--------cccHHHHHHHhHHHHHHHHHHHHhc--
Q 010075 93 DISSEDLGLKDSNLKEE-----LW------NELDIMVNSAAITKF--------DERYDVAFGINTLGVIHLVNFAKKC-- 151 (519)
Q Consensus 93 Dl~~~~lgls~~~~~~~-----l~------~~vdiViH~Aa~v~f--------~~~~~~~~~~Nv~gt~~ll~~a~~~-- 151 (519)
|++++. +. +. +. ..+|++||+|+.... .+.++..+++|+.|+..+.+.+.+.
T Consensus 53 D~~~~~------~~-~~~~~~~~~~~~~~~~~~~~~v~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~ 125 (243)
T PRK07023 53 DLSDAA------AA-AAWLAGDLLAAFVDGASRVLLINNAGTVEPIGPLATLDAAAIARAVGLNVAAPLMLTAALAQAAS 125 (243)
T ss_pred ccCCHH------HH-HHHHHHHHHHHhccCCCceEEEEcCcccCCCCccccCCHHHHHHHeeeeehHHHHHHHHHHHHhh
Confidence 999642 21 12 11 258999999997542 2456777899999977776665432
Q ss_pred -cCCceEEEEecceeecCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcH
Q 010075 152 -VKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNT 230 (519)
Q Consensus 152 -~~l~~~V~vSTa~v~~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~ 230 (519)
.+.+++|++||...+... .....
T Consensus 126 ~~~~~~iv~isS~~~~~~~--------------------------------------------------------~~~~~ 149 (243)
T PRK07023 126 DAAERRILHISSGAARNAY--------------------------------------------------------AGWSV 149 (243)
T ss_pred ccCCCEEEEEeChhhcCCC--------------------------------------------------------CCchH
Confidence 245689999997543211 22357
Q ss_pred HHHHHHHHHHHHHHh----hcCCcEEEEecCccccC
Q 010075 231 YVFTKTMGEMLMQQS----KENLSLVIIRPTVVSGT 262 (519)
Q Consensus 231 Y~~sK~~aE~lv~~~----~~~lp~~IvRPs~V~g~ 262 (519)
|+.+|+..|.+++.+ ..++++.+++||.+-++
T Consensus 150 Y~~sK~a~~~~~~~~~~~~~~~i~v~~v~pg~~~t~ 185 (243)
T PRK07023 150 YCATKAALDHHARAVALDANRALRIVSLAPGVVDTG 185 (243)
T ss_pred HHHHHHHHHHHHHHHHhcCCCCcEEEEecCCccccH
Confidence 999999999999866 24799999999988554
|
|
| >PRK05854 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.45 E-value=1.5e-12 Score=132.34 Aligned_cols=189 Identities=14% Similarity=0.101 Sum_probs=120.9
Q ss_pred cCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 010075 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (519)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (519)
++||+++||||||+||+++++.|++.| .+|++..|+.... +... +.+.+..+ ..++.+
T Consensus 12 l~gk~~lITGas~GIG~~~a~~La~~G---~~Vil~~R~~~~~---~~~~---------~~l~~~~~-------~~~v~~ 69 (313)
T PRK05854 12 LSGKRAVVTGASDGLGLGLARRLAAAG---AEVILPVRNRAKG---EAAV---------AAIRTAVP-------DAKLSL 69 (313)
T ss_pred cCCCEEEEeCCCChHHHHHHHHHHHCC---CEEEEEeCCHHHH---HHHH---------HHHHHhCC-------CCceEE
Confidence 679999999999999999999999988 6888888874321 1111 11222211 246889
Q ss_pred EeccCCCCCCCCChhhhHHHHhcCccEEEEcCccCCc------cccHHHHHHHhHHHHHHHHHHHHhc--cCCceEEEEe
Q 010075 90 VPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF------DERYDVAFGINTLGVIHLVNFAKKC--VKLKVFVHVS 161 (519)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~~~vdiViH~Aa~v~f------~~~~~~~~~~Nv~gt~~ll~~a~~~--~~l~~~V~vS 161 (519)
+.+|+++++..-...+.......++|++||+||.... .+.++..+.+|+.|...+.+.+... .+..++|++|
T Consensus 70 ~~~Dl~d~~sv~~~~~~~~~~~~~iD~li~nAG~~~~~~~~~t~~~~e~~~~vN~~g~~~l~~~llp~l~~~~~riv~vs 149 (313)
T PRK05854 70 RALDLSSLASVAALGEQLRAEGRPIHLLINNAGVMTPPERQTTADGFELQFGTNHLGHFALTAHLLPLLRAGRARVTSQS 149 (313)
T ss_pred EEecCCCHHHHHHHHHHHHHhCCCccEEEECCccccCCccccCcccHHHHhhhhhHHHHHHHHHHHHHHHhCCCCeEEEe
Confidence 9999996321100000011112359999999997532 1567888999999988777766531 1235899999
Q ss_pred cceeecCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcHHHHHHHHHHHH
Q 010075 162 TAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEML 241 (519)
Q Consensus 162 Ta~v~~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~Y~~sK~~aE~l 241 (519)
|....... +.-..+.+.. ...+...|+.||+..+.+
T Consensus 150 S~~~~~~~---~~~~~~~~~~-----------------------------------------~~~~~~~Y~~SK~a~~~~ 185 (313)
T PRK05854 150 SIAARRGA---INWDDLNWER-----------------------------------------SYAGMRAYSQSKIAVGLF 185 (313)
T ss_pred chhhcCCC---cCcccccccc-----------------------------------------cCcchhhhHHHHHHHHHH
Confidence 87543211 1100010000 012335799999999988
Q ss_pred HHHh-------hcCCcEEEEecCccccCCC
Q 010075 242 MQQS-------KENLSLVIIRPTVVSGTYK 264 (519)
Q Consensus 242 v~~~-------~~~lp~~IvRPs~V~g~~~ 264 (519)
.++. ..++.+..+.||.|-....
T Consensus 186 ~~~la~~~~~~~~gI~v~~v~PG~v~T~~~ 215 (313)
T PRK05854 186 ALELDRRSRAAGWGITSNLAHPGVAPTNLL 215 (313)
T ss_pred HHHHHHHhhcCCCCeEEEEEecceeccCcc
Confidence 8765 1368999999999876543
|
|
| >PRK07831 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.45 E-value=4.6e-12 Score=125.13 Aligned_cols=224 Identities=16% Similarity=0.140 Sum_probs=141.3
Q ss_pred hhcCCCEEEEeCCcc-HHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCc
Q 010075 8 EFLENKTILVSGVTG-FVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEK 86 (519)
Q Consensus 8 ~~~~~k~VlITGaTG-FlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~ 86 (519)
..+.+++++||||+| .||+.+++.|++.| .+|++..|..... ++.. +.+++..+ ..+
T Consensus 13 ~~~~~k~vlItG~sg~gIG~~ia~~l~~~G---~~V~~~~~~~~~~---~~~~---------~~~~~~~~-------~~~ 70 (262)
T PRK07831 13 GLLAGKVVLVTAAAGTGIGSATARRALEEG---ARVVISDIHERRL---GETA---------DELAAELG-------LGR 70 (262)
T ss_pred cccCCCEEEEECCCcccHHHHHHHHHHHcC---CEEEEEeCCHHHH---HHHH---------HHHHHhcC-------Cce
Confidence 356789999999998 69999999999988 4678777754221 1111 11111111 146
Q ss_pred eEEEeccCCCCCCCCChhhhHHHHh-------cCccEEEEcCccCCc-------cccHHHHHHHhHHHHHHHHHHHHhc-
Q 010075 87 ITFVPGDISSEDLGLKDSNLKEELW-------NELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKC- 151 (519)
Q Consensus 87 v~~v~gDl~~~~lgls~~~~~~~l~-------~~vdiViH~Aa~v~f-------~~~~~~~~~~Nv~gt~~ll~~a~~~- 151 (519)
+..+.+|++++ +..+.++ ..+|+|||+||.... .+.+...+++|+.|+..+++.+...
T Consensus 71 ~~~~~~Dl~~~-------~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~ 143 (262)
T PRK07831 71 VEAVVCDVTSE-------AQVDALIDAAVERLGRLDVLVNNAGLGGQTPVVDMTDDEWSRVLDVTLTGTFRATRAALRYM 143 (262)
T ss_pred EEEEEccCCCH-------HHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHH
Confidence 88899999963 2222222 468999999996431 2457778899999999988876532
Q ss_pred --cC-CceEEEEecceeecCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCC
Q 010075 152 --VK-LKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWP 228 (519)
Q Consensus 152 --~~-l~~~V~vSTa~v~~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~ 228 (519)
.+ -.++|++||....... ...
T Consensus 144 ~~~~~~g~iv~~ss~~~~~~~--------------------------------------------------------~~~ 167 (262)
T PRK07831 144 RARGHGGVIVNNASVLGWRAQ--------------------------------------------------------HGQ 167 (262)
T ss_pred HhcCCCcEEEEeCchhhcCCC--------------------------------------------------------CCC
Confidence 12 3578888875432110 123
Q ss_pred cHHHHHHHHHHHHHHHh-----hcCCcEEEEecCccccCCCCCCCcccccccccHHHHHHhhcCCceeeccCCCceeeee
Q 010075 229 NTYVFTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVI 303 (519)
Q Consensus 229 n~Y~~sK~~aE~lv~~~-----~~~lp~~IvRPs~V~g~~~~p~~gw~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~d~v 303 (519)
..|+.+|+..+.+++.+ ..++++..++|+.+..+..+.. ............. ...-+.
T Consensus 168 ~~Y~~sKaal~~~~~~la~e~~~~gI~v~~i~Pg~~~t~~~~~~--------~~~~~~~~~~~~~---------~~~r~~ 230 (262)
T PRK07831 168 AHYAAAKAGVMALTRCSALEAAEYGVRINAVAPSIAMHPFLAKV--------TSAELLDELAARE---------AFGRAA 230 (262)
T ss_pred cchHHHHHHHHHHHHHHHHHhCccCeEEEEEeeCCccCcccccc--------cCHHHHHHHHhcC---------CCCCCc
Confidence 46999999999998865 3579999999999887643110 0111222221111 112245
Q ss_pred eHHHHHHHHHHHHHHhccCCCCCcEEEecCC
Q 010075 304 PVDMVVNAMIVAMVAHAKQPSDANIYHVGSS 334 (519)
Q Consensus 304 pVDdva~aii~a~~~~~~~~~~~~iyni~s~ 334 (519)
..+|++++++.++..... .-.++++.+.++
T Consensus 231 ~p~~va~~~~~l~s~~~~-~itG~~i~v~~~ 260 (262)
T PRK07831 231 EPWEVANVIAFLASDYSS-YLTGEVVSVSSQ 260 (262)
T ss_pred CHHHHHHHHHHHcCchhc-CcCCceEEeCCC
Confidence 678999999988764322 123566666553
|
|
| >PRK09009 C factor cell-cell signaling protein; Provisional | Back alignment and domain information |
|---|
Probab=99.45 E-value=9e-12 Score=120.88 Aligned_cols=207 Identities=16% Similarity=0.263 Sum_probs=131.8
Q ss_pred CEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEEec
Q 010075 13 KTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVPG 92 (519)
Q Consensus 13 k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v~g 92 (519)
|+|+||||||+||++++++|++.++++ .|.+..|..... . ...++.++++
T Consensus 1 ~~vlItGas~gIG~~ia~~l~~~~~~~-~v~~~~~~~~~~-----~------------------------~~~~~~~~~~ 50 (235)
T PRK09009 1 MNILIVGGSGGIGKAMVKQLLERYPDA-TVHATYRHHKPD-----F------------------------QHDNVQWHAL 50 (235)
T ss_pred CEEEEECCCChHHHHHHHHHHHhCCCC-EEEEEccCCccc-----c------------------------ccCceEEEEe
Confidence 589999999999999999999987654 566655543211 0 0256788999
Q ss_pred cCCCCCCCCChhhhHHHHhcCccEEEEcCccCCcc-------------ccHHHHHHHhHHHHHHHHHHHHh-c--cCCce
Q 010075 93 DISSEDLGLKDSNLKEELWNELDIMVNSAAITKFD-------------ERYDVAFGINTLGVIHLVNFAKK-C--VKLKV 156 (519)
Q Consensus 93 Dl~~~~lgls~~~~~~~l~~~vdiViH~Aa~v~f~-------------~~~~~~~~~Nv~gt~~ll~~a~~-~--~~l~~ 156 (519)
|++++. ..+......+++|+|||+||..... +.+...+.+|+.|+..+.+.+.. + .+..+
T Consensus 51 Dls~~~----~~~~~~~~~~~id~li~~aG~~~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~~~~~ 126 (235)
T PRK09009 51 DVTDEA----EIKQLSEQFTQLDWLINCVGMLHTQDKGPEKSLQALDADFFLQNITLNTLPSLLLAKHFTPKLKQSESAK 126 (235)
T ss_pred cCCCHH----HHHHHHHhcCCCCEEEECCccccccccCcccccccCCHHHHHHHHHHHhHHHHHHHHHHHhhccccCCce
Confidence 999642 1111123345799999999986321 23557789999999888877754 2 13357
Q ss_pred EEEEecceeecCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcHHHHHHH
Q 010075 157 FVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKT 236 (519)
Q Consensus 157 ~V~vSTa~v~~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~Y~~sK~ 236 (519)
++++||.. +.. .+..+ +....|+.+|+
T Consensus 127 i~~iss~~--~~~----~~~~~-----------------------------------------------~~~~~Y~asK~ 153 (235)
T PRK09009 127 FAVISAKV--GSI----SDNRL-----------------------------------------------GGWYSYRASKA 153 (235)
T ss_pred EEEEeecc--ccc----ccCCC-----------------------------------------------CCcchhhhhHH
Confidence 88888742 111 01100 11247999999
Q ss_pred HHHHHHHHh----h---cCCcEEEEecCccccCCCCCCCcccccccccHHHHHHhhcCCceeeccCCCceeeeeeHHHHH
Q 010075 237 MGEMLMQQS----K---ENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVV 309 (519)
Q Consensus 237 ~aE~lv~~~----~---~~lp~~IvRPs~V~g~~~~p~~gw~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~d~vpVDdva 309 (519)
..+.+++.. . .++.+..+.||.|-.+...+. ... .....++..+++|
T Consensus 154 a~~~~~~~la~e~~~~~~~i~v~~v~PG~v~t~~~~~~-----------------~~~---------~~~~~~~~~~~~a 207 (235)
T PRK09009 154 ALNMFLKTLSIEWQRSLKHGVVLALHPGTTDTALSKPF-----------------QQN---------VPKGKLFTPEYVA 207 (235)
T ss_pred HHHHHHHHHHHHhhcccCCeEEEEEcccceecCCCcch-----------------hhc---------cccCCCCCHHHHH
Confidence 999888754 1 368888999998866543110 000 0112246889999
Q ss_pred HHHHHHHHHhccCCCCCcEEEecC
Q 010075 310 NAMIVAMVAHAKQPSDANIYHVGS 333 (519)
Q Consensus 310 ~aii~a~~~~~~~~~~~~iyni~s 333 (519)
++++.++....... .+..+.+.+
T Consensus 208 ~~~~~l~~~~~~~~-~g~~~~~~g 230 (235)
T PRK09009 208 QCLLGIIANATPAQ-SGSFLAYDG 230 (235)
T ss_pred HHHHHHHHcCChhh-CCcEEeeCC
Confidence 99999987542211 245554443
|
|
| >PRK07533 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.45 E-value=7.1e-12 Score=123.76 Aligned_cols=227 Identities=15% Similarity=0.113 Sum_probs=138.3
Q ss_pred cCCCEEEEeCCc--cHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCce
Q 010075 10 LENKTILVSGVT--GFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKI 87 (519)
Q Consensus 10 ~~~k~VlITGaT--GFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v 87 (519)
++||+++||||+ +.||++++++|++.| .+|++..|+.+.....+++. ++. ..+
T Consensus 8 ~~~k~~lItGas~g~GIG~a~a~~la~~G---~~v~l~~r~~~~~~~~~~~~-------------~~~---------~~~ 62 (258)
T PRK07533 8 LAGKRGLVVGIANEQSIAWGCARAFRALG---AELAVTYLNDKARPYVEPLA-------------EEL---------DAP 62 (258)
T ss_pred cCCCEEEEECCCCCCcHHHHHHHHHHHcC---CEEEEEeCChhhHHHHHHHH-------------Hhh---------ccc
Confidence 579999999998 489999999999998 57788888643221122221 111 234
Q ss_pred EEEeccCCCCCCCCChhhhHHHHhcCccEEEEcCccCCc-----------cccHHHHHHHhHHHHHHHHHHHHh-ccCCc
Q 010075 88 TFVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF-----------DERYDVAFGINTLGVIHLVNFAKK-CVKLK 155 (519)
Q Consensus 88 ~~v~gDl~~~~lgls~~~~~~~l~~~vdiViH~Aa~v~f-----------~~~~~~~~~~Nv~gt~~ll~~a~~-~~~l~ 155 (519)
.++.+|++++.---.-.+...+...++|++||+||.... .+.++..+++|+.|+..+.+.+.. +.+-.
T Consensus 63 ~~~~~D~~~~~~v~~~~~~~~~~~g~ld~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~p~m~~~g 142 (258)
T PRK07533 63 IFLPLDVREPGQLEAVFARIAEEWGRLDFLLHSIAFAPKEDLHGRVVDCSREGFALAMDVSCHSFIRMARLAEPLMTNGG 142 (258)
T ss_pred eEEecCcCCHHHHHHHHHHHHHHcCCCCEEEEcCccCCcccccCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHhccCC
Confidence 578999996431000000011112469999999986421 145778899999999999887654 32235
Q ss_pred eEEEEecceeecCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcHHHHHH
Q 010075 156 VFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTK 235 (519)
Q Consensus 156 ~~V~vSTa~v~~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~Y~~sK 235 (519)
++|++||...... . .....|+.||
T Consensus 143 ~Ii~iss~~~~~~---------~-----------------------------------------------~~~~~Y~asK 166 (258)
T PRK07533 143 SLLTMSYYGAEKV---------V-----------------------------------------------ENYNLMGPVK 166 (258)
T ss_pred EEEEEeccccccC---------C-----------------------------------------------ccchhhHHHH
Confidence 7888887532110 0 1234699999
Q ss_pred HHHHHHHHHh-----hcCCcEEEEecCccccCCCCCCCcccccccccHHHHHHhhcCCceeeccCCCceeeeeeHHHHHH
Q 010075 236 TMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVN 310 (519)
Q Consensus 236 ~~aE~lv~~~-----~~~lp~~IvRPs~V~g~~~~p~~gw~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~d~vpVDdva~ 310 (519)
+..+.+.+.. ..++.+..+.||.|-.+..+... ............ . ....+...+|+|+
T Consensus 167 aal~~l~~~la~el~~~gI~Vn~v~PG~v~T~~~~~~~-------~~~~~~~~~~~~----~-----p~~r~~~p~dva~ 230 (258)
T PRK07533 167 AALESSVRYLAAELGPKGIRVHAISPGPLKTRAASGID-------DFDALLEDAAER----A-----PLRRLVDIDDVGA 230 (258)
T ss_pred HHHHHHHHHHHHHhhhcCcEEEEEecCCcCChhhhccC-------CcHHHHHHHHhc----C-----CcCCCCCHHHHHH
Confidence 9988887754 35799999999988664321110 001111111111 0 1123467799999
Q ss_pred HHHHHHHHhccCCCCCcEEEecCC
Q 010075 311 AMIVAMVAHAKQPSDANIYHVGSS 334 (519)
Q Consensus 311 aii~a~~~~~~~~~~~~iyni~s~ 334 (519)
+++.++..... .-.+.++.+.+|
T Consensus 231 ~~~~L~s~~~~-~itG~~i~vdgg 253 (258)
T PRK07533 231 VAAFLASDAAR-RLTGNTLYIDGG 253 (258)
T ss_pred HHHHHhChhhc-cccCcEEeeCCc
Confidence 99988754221 123566666554
|
|
| >PRK08415 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.45 E-value=3.4e-12 Score=127.31 Aligned_cols=224 Identities=15% Similarity=0.116 Sum_probs=137.0
Q ss_pred cCCCEEEEeCCc--cHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCce
Q 010075 10 LENKTILVSGVT--GFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKI 87 (519)
Q Consensus 10 ~~~k~VlITGaT--GFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v 87 (519)
++||+++||||+ +.||+++++.|++.| .+|++..|+.. ..+++. .+.++. ..+
T Consensus 3 l~~k~~lItGas~~~GIG~aiA~~la~~G---~~Vil~~r~~~---~~~~~~----------~~~~~~--------~~~- 57 (274)
T PRK08415 3 MKGKKGLIVGVANNKSIAYGIAKACFEQG---AELAFTYLNEA---LKKRVE----------PIAQEL--------GSD- 57 (274)
T ss_pred cCCcEEEEECCCCCCCHHHHHHHHHHHCC---CEEEEEecCHH---HHHHHH----------HHHHhc--------CCc-
Confidence 468999999997 799999999999998 57788777632 112222 111111 123
Q ss_pred EEEeccCCCCCCCCChhhhHHHH---hcCccEEEEcCccCC-------c----cccHHHHHHHhHHHHHHHHHHHHh-cc
Q 010075 88 TFVPGDISSEDLGLKDSNLKEEL---WNELDIMVNSAAITK-------F----DERYDVAFGINTLGVIHLVNFAKK-CV 152 (519)
Q Consensus 88 ~~v~gDl~~~~lgls~~~~~~~l---~~~vdiViH~Aa~v~-------f----~~~~~~~~~~Nv~gt~~ll~~a~~-~~ 152 (519)
.++.+|+++++. -....+.+ ..++|++||+||... + .+.++..+++|+.|+..+.+.+.. +.
T Consensus 58 ~~~~~Dv~d~~~---v~~~~~~i~~~~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~ 134 (274)
T PRK08415 58 YVYELDVSKPEH---FKSLAESLKKDLGKIDFIVHSVAFAPKEALEGSFLETSKEAFNIAMEISVYSLIELTRALLPLLN 134 (274)
T ss_pred eEEEecCCCHHH---HHHHHHHHHHHcCCCCEEEECCccCcccccccccccCCHHHHHHHhhhhhHHHHHHHHHHHHHhc
Confidence 578999996431 11111122 246999999999642 1 245778899999999998887654 32
Q ss_pred CCceEEEEecceeecCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcHHH
Q 010075 153 KLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYV 232 (519)
Q Consensus 153 ~l~~~V~vSTa~v~~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~Y~ 232 (519)
.-.++|++||....... +....|+
T Consensus 135 ~~g~Iv~isS~~~~~~~--------------------------------------------------------~~~~~Y~ 158 (274)
T PRK08415 135 DGASVLTLSYLGGVKYV--------------------------------------------------------PHYNVMG 158 (274)
T ss_pred cCCcEEEEecCCCccCC--------------------------------------------------------Ccchhhh
Confidence 33589999986422100 1124699
Q ss_pred HHHHHHHHHHHHh-----hcCCcEEEEecCccccCCCCCCCcccccccccHHHHHHhhcCCceeeccCCCceeeeeeHHH
Q 010075 233 FTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDM 307 (519)
Q Consensus 233 ~sK~~aE~lv~~~-----~~~lp~~IvRPs~V~g~~~~p~~gw~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~d~vpVDd 307 (519)
.||+..+.+.+.. ..++.+..+-||.|..+.....+. ... ........ .+ ..-+...+|
T Consensus 159 asKaal~~l~~~la~el~~~gIrVn~v~PG~v~T~~~~~~~~-------~~~-~~~~~~~~---~p-----l~r~~~ped 222 (274)
T PRK08415 159 VAKAALESSVRYLAVDLGKKGIRVNAISAGPIKTLAASGIGD-------FRM-ILKWNEIN---AP-----LKKNVSIEE 222 (274)
T ss_pred hHHHHHHHHHHHHHHHhhhcCeEEEEEecCccccHHHhccch-------hhH-Hhhhhhhh---Cc-----hhccCCHHH
Confidence 9999988887754 357999999999886643211100 000 00000000 01 112456799
Q ss_pred HHHHHHHHHHHhccCCCCCcEEEecCC
Q 010075 308 VVNAMIVAMVAHAKQPSDANIYHVGSS 334 (519)
Q Consensus 308 va~aii~a~~~~~~~~~~~~iyni~s~ 334 (519)
||++++.++...... -.+.++.+.+|
T Consensus 223 va~~v~fL~s~~~~~-itG~~i~vdGG 248 (274)
T PRK08415 223 VGNSGMYLLSDLSSG-VTGEIHYVDAG 248 (274)
T ss_pred HHHHHHHHhhhhhhc-ccccEEEEcCc
Confidence 999999888643221 12566666555
|
|
| >PRK06483 dihydromonapterin reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.44 E-value=2.5e-12 Score=124.90 Aligned_cols=212 Identities=10% Similarity=0.039 Sum_probs=134.4
Q ss_pred CCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEEe
Q 010075 12 NKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVP 91 (519)
Q Consensus 12 ~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v~ 91 (519)
+|+++||||+|+||++++++|++.| .+|+++.|+... ..+.+. ..++.++.
T Consensus 2 ~k~vlItGas~gIG~~ia~~l~~~G---~~V~~~~r~~~~--~~~~~~------------------------~~~~~~~~ 52 (236)
T PRK06483 2 PAPILITGAGQRIGLALAWHLLAQG---QPVIVSYRTHYP--AIDGLR------------------------QAGAQCIQ 52 (236)
T ss_pred CceEEEECCCChHHHHHHHHHHHCC---CeEEEEeCCchh--HHHHHH------------------------HcCCEEEE
Confidence 5799999999999999999999988 578888887532 112111 02367889
Q ss_pred ccCCCCCCCCChhhhHHHH---hcCccEEEEcCccCCc-------cccHHHHHHHhHHHHHHHHHHHHhc-c--C--Cce
Q 010075 92 GDISSEDLGLKDSNLKEEL---WNELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKC-V--K--LKV 156 (519)
Q Consensus 92 gDl~~~~lgls~~~~~~~l---~~~vdiViH~Aa~v~f-------~~~~~~~~~~Nv~gt~~ll~~a~~~-~--~--l~~ 156 (519)
+|+++++- -....+.+ ..++|++||+||.... .+.++..+++|+.++..+.+.+... . + ..+
T Consensus 53 ~D~~~~~~---~~~~~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~~~~~~~~~g~ 129 (236)
T PRK06483 53 ADFSTNAG---IMAFIDELKQHTDGLRAIIHNASDWLAEKPGAPLADVLARMMQIHVNAPYLLNLALEDLLRGHGHAASD 129 (236)
T ss_pred cCCCCHHH---HHHHHHHHHhhCCCccEEEECCccccCCCcCccCHHHHHHHHHHcchHHHHHHHHHHHHHHhCCCCCce
Confidence 99996421 11111122 2459999999986421 2457788999999998877666542 1 2 357
Q ss_pred EEEEecceeecCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcHHHHHHH
Q 010075 157 FVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKT 236 (519)
Q Consensus 157 ~V~vSTa~v~~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~Y~~sK~ 236 (519)
+|++||....... .....|+.||+
T Consensus 130 iv~~ss~~~~~~~--------------------------------------------------------~~~~~Y~asKa 153 (236)
T PRK06483 130 IIHITDYVVEKGS--------------------------------------------------------DKHIAYAASKA 153 (236)
T ss_pred EEEEcchhhccCC--------------------------------------------------------CCCccHHHHHH
Confidence 9999886422110 12357999999
Q ss_pred HHHHHHHHh----hcCCcEEEEecCccccCCCCCCCcccccccccHHHHHHhhcCCceeeccCCCceeeeeeHHHHHHHH
Q 010075 237 MGEMLMQQS----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAM 312 (519)
Q Consensus 237 ~aE~lv~~~----~~~lp~~IvRPs~V~g~~~~p~~gw~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~d~vpVDdva~ai 312 (519)
..|.+++.+ .+++.+..+.||.+...... + ............ ..-....+|+++++
T Consensus 154 al~~l~~~~a~e~~~~irvn~v~Pg~~~~~~~~------~-----~~~~~~~~~~~~---------~~~~~~~~~va~~~ 213 (236)
T PRK06483 154 ALDNMTLSFAAKLAPEVKVNSIAPALILFNEGD------D-----AAYRQKALAKSL---------LKIEPGEEEIIDLV 213 (236)
T ss_pred HHHHHHHHHHHHHCCCcEEEEEccCceecCCCC------C-----HHHHHHHhccCc---------cccCCCHHHHHHHH
Confidence 999998865 34699999999988432110 0 011111111100 01123478999999
Q ss_pred HHHHHHhccCCCCCcEEEecCC
Q 010075 313 IVAMVAHAKQPSDANIYHVGSS 334 (519)
Q Consensus 313 i~a~~~~~~~~~~~~iyni~s~ 334 (519)
..++.. ..-.+.++.+.+|
T Consensus 214 ~~l~~~---~~~~G~~i~vdgg 232 (236)
T PRK06483 214 DYLLTS---CYVTGRSLPVDGG 232 (236)
T ss_pred HHHhcC---CCcCCcEEEeCcc
Confidence 888842 1123577777665
|
|
| >smart00822 PKS_KR This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain | Back alignment and domain information |
|---|
Probab=99.44 E-value=4.7e-12 Score=116.07 Aligned_cols=164 Identities=16% Similarity=0.169 Sum_probs=115.1
Q ss_pred CEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEEec
Q 010075 13 KTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVPG 92 (519)
Q Consensus 13 k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v~g 92 (519)
++++||||||++|.+++++|++.+. ..|+++.|+.......... ++.+++. ..++..+.+
T Consensus 1 ~~~li~Ga~~~iG~~~~~~l~~~g~--~~v~~~~r~~~~~~~~~~~---------~~~~~~~---------~~~~~~~~~ 60 (180)
T smart00822 1 GTYLITGGLGGLGLELARWLAERGA--RHLVLLSRSGPDAPGAAEL---------LAELEAL---------GAEVTVVAC 60 (180)
T ss_pred CEEEEEcCCChHHHHHHHHHHHhhC--CeEEEEeCCCCCCccHHHH---------HHHHHhc---------CCeEEEEEC
Confidence 5799999999999999999998774 3677888865433211110 1111111 246788999
Q ss_pred cCCCCCCCCChhhhHHHH-------hcCccEEEEcCccCCc-------cccHHHHHHHhHHHHHHHHHHHHhccCCceEE
Q 010075 93 DISSEDLGLKDSNLKEEL-------WNELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKCVKLKVFV 158 (519)
Q Consensus 93 Dl~~~~lgls~~~~~~~l-------~~~vdiViH~Aa~v~f-------~~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V 158 (519)
|++++. + .+.+ ...+|+|||+|+.... .+.++..+++|+.|+.++++.+++. +.++++
T Consensus 61 D~~~~~------~-~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~ii 132 (180)
T smart00822 61 DVADRA------A-LAAALAAIPARLGPLRGVIHAAGVLDDGLLANLTPERFAAVLAPKVDGAWNLHELTRDL-PLDFFV 132 (180)
T ss_pred CCCCHH------H-HHHHHHHHHHHcCCeeEEEEccccCCccccccCCHHHHHHhhchHhHHHHHHHHHhccC-CcceEE
Confidence 998532 2 2222 2457999999996532 1456778999999999999999764 678899
Q ss_pred EEecceeecCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcHHHHHHHHH
Q 010075 159 HVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMG 238 (519)
Q Consensus 159 ~vSTa~v~~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~Y~~sK~~a 238 (519)
++||....-.. .....|+.+|...
T Consensus 133 ~~ss~~~~~~~--------------------------------------------------------~~~~~y~~sk~~~ 156 (180)
T smart00822 133 LFSSVAGVLGN--------------------------------------------------------PGQANYAAANAFL 156 (180)
T ss_pred EEccHHHhcCC--------------------------------------------------------CCchhhHHHHHHH
Confidence 99986442110 1134699999999
Q ss_pred HHHHHHh-hcCCcEEEEecCccc
Q 010075 239 EMLMQQS-KENLSLVIIRPTVVS 260 (519)
Q Consensus 239 E~lv~~~-~~~lp~~IvRPs~V~ 260 (519)
+.+++.. ..+++++.+.||.+-
T Consensus 157 ~~~~~~~~~~~~~~~~~~~g~~~ 179 (180)
T smart00822 157 DALAAHRRARGLPATSINWGAWA 179 (180)
T ss_pred HHHHHHHHhcCCceEEEeecccc
Confidence 9999765 668999999988653
|
It uses NADPH to reduce the keto group to a hydroxy group. |
| >PRK07370 enoyl-(acyl carrier protein) reductase; Validated | Back alignment and domain information |
|---|
Probab=99.44 E-value=4.9e-12 Score=124.90 Aligned_cols=227 Identities=17% Similarity=0.171 Sum_probs=138.8
Q ss_pred cCCCEEEEeCCc--cHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCce
Q 010075 10 LENKTILVSGVT--GFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKI 87 (519)
Q Consensus 10 ~~~k~VlITGaT--GFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v 87 (519)
++||+++||||+ +.||++++++|++.| .+|++..|+.......+.+. + +.++ ..++
T Consensus 4 l~~k~~lItGas~~~GIG~aia~~la~~G---~~v~~~~~~~~~~~~~~~~~-~---------~~~~---------~~~~ 61 (258)
T PRK07370 4 LTGKKALVTGIANNRSIAWGIAQQLHAAG---AELGITYLPDEKGRFEKKVR-E---------LTEP---------LNPS 61 (258)
T ss_pred cCCcEEEEeCCCCCCchHHHHHHHHHHCC---CEEEEEecCcccchHHHHHH-H---------HHhc---------cCcc
Confidence 468999999986 799999999999998 56777766543211222221 1 1111 1245
Q ss_pred EEEeccCCCCCCCCChhhhHHHH---hcCccEEEEcCccCC-------c----cccHHHHHHHhHHHHHHHHHHHHh-cc
Q 010075 88 TFVPGDISSEDLGLKDSNLKEEL---WNELDIMVNSAAITK-------F----DERYDVAFGINTLGVIHLVNFAKK-CV 152 (519)
Q Consensus 88 ~~v~gDl~~~~lgls~~~~~~~l---~~~vdiViH~Aa~v~-------f----~~~~~~~~~~Nv~gt~~ll~~a~~-~~ 152 (519)
.++.+|+++++. -.+..+.+ ..++|++||+||... + .+.++..+++|+.|+..+.+.+.. +.
T Consensus 62 ~~~~~Dl~d~~~---v~~~~~~~~~~~g~iD~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~l~~~~~~~m~ 138 (258)
T PRK07370 62 LFLPCDVQDDAQ---IEETFETIKQKWGKLDILVHCLAFAGKEELIGDFSATSREGFARALEISAYSLAPLCKAAKPLMS 138 (258)
T ss_pred eEeecCcCCHHH---HHHHHHHHHHHcCCCCEEEEcccccCcccccCcchhhCHHHHHHHheeeeHHHHHHHHHHHHHHh
Confidence 688999996431 11111111 246999999999642 2 145678899999999998887653 22
Q ss_pred CCceEEEEecceeecCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcHHH
Q 010075 153 KLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYV 232 (519)
Q Consensus 153 ~l~~~V~vSTa~v~~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~Y~ 232 (519)
.-.++|++||...... . +....|+
T Consensus 139 ~~g~Iv~isS~~~~~~---------~-----------------------------------------------~~~~~Y~ 162 (258)
T PRK07370 139 EGGSIVTLTYLGGVRA---------I-----------------------------------------------PNYNVMG 162 (258)
T ss_pred hCCeEEEEeccccccC---------C-----------------------------------------------cccchhh
Confidence 2368999998643210 0 1234699
Q ss_pred HHHHHHHHHHHHh-----hcCCcEEEEecCccccCCCCCCCcccccccccHHHHHHhhcCCceeeccCCCceeeeeeHHH
Q 010075 233 FTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDM 307 (519)
Q Consensus 233 ~sK~~aE~lv~~~-----~~~lp~~IvRPs~V~g~~~~p~~gw~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~d~vpVDd 307 (519)
.||+..+.+.+.. ..++.+..+.||.|-.+.....++ ........... .....+...+|
T Consensus 163 asKaal~~l~~~la~el~~~gI~Vn~i~PG~v~T~~~~~~~~-------~~~~~~~~~~~---------~p~~r~~~~~d 226 (258)
T PRK07370 163 VAKAALEASVRYLAAELGPKNIRVNAISAGPIRTLASSAVGG-------ILDMIHHVEEK---------APLRRTVTQTE 226 (258)
T ss_pred HHHHHHHHHHHHHHHHhCcCCeEEEEEecCcccCchhhcccc-------chhhhhhhhhc---------CCcCcCCCHHH
Confidence 9999999888754 457999999999987653211111 00111111100 01123556799
Q ss_pred HHHHHHHHHHHhccCCCCCcEEEecCC
Q 010075 308 VVNAMIVAMVAHAKQPSDANIYHVGSS 334 (519)
Q Consensus 308 va~aii~a~~~~~~~~~~~~iyni~s~ 334 (519)
+++++..++..... .-.++++.+.+|
T Consensus 227 va~~~~fl~s~~~~-~~tG~~i~vdgg 252 (258)
T PRK07370 227 VGNTAAFLLSDLAS-GITGQTIYVDAG 252 (258)
T ss_pred HHHHHHHHhChhhc-cccCcEEEECCc
Confidence 99999998864322 112456666554
|
|
| >PRK08594 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.43 E-value=5.3e-12 Score=124.64 Aligned_cols=226 Identities=15% Similarity=0.140 Sum_probs=139.7
Q ss_pred cCCCEEEEeCCc--cHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCce
Q 010075 10 LENKTILVSGVT--GFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKI 87 (519)
Q Consensus 10 ~~~k~VlITGaT--GFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v 87 (519)
++||+++||||+ +.||++++++|++.| .+|++..|..+.....+++. ++.. ..++
T Consensus 5 ~~~k~~lItGa~~s~GIG~aia~~la~~G---~~v~~~~r~~~~~~~~~~~~-------------~~~~-------~~~~ 61 (257)
T PRK08594 5 LEGKTYVVMGVANKRSIAWGIARSLHNAG---AKLVFTYAGERLEKEVRELA-------------DTLE-------GQES 61 (257)
T ss_pred cCCCEEEEECCCCCCCHHHHHHHHHHHCC---CEEEEecCcccchHHHHHHH-------------HHcC-------CCce
Confidence 578999999997 899999999999998 57788877543322223222 1110 2467
Q ss_pred EEEeccCCCCCCCCChhhhHHHH---hcCccEEEEcCccCC-------c----cccHHHHHHHhHHHHHHHHHHHHh-cc
Q 010075 88 TFVPGDISSEDLGLKDSNLKEEL---WNELDIMVNSAAITK-------F----DERYDVAFGINTLGVIHLVNFAKK-CV 152 (519)
Q Consensus 88 ~~v~gDl~~~~lgls~~~~~~~l---~~~vdiViH~Aa~v~-------f----~~~~~~~~~~Nv~gt~~ll~~a~~-~~ 152 (519)
.++.+|+++++. -....+.+ ..++|++||+|+... + .+.+...+++|+.++..+.+.+.. +.
T Consensus 62 ~~~~~Dv~d~~~---v~~~~~~~~~~~g~ld~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~ 138 (257)
T PRK08594 62 LLLPCDVTSDEE---ITACFETIKEEVGVIHGVAHCIAFANKEDLRGEFLETSRDGFLLAQNISAYSLTAVAREAKKLMT 138 (257)
T ss_pred EEEecCCCCHHH---HHHHHHHHHHhCCCccEEEECcccCCCCcCCCccccCCHHHHHHHHhhhHHHHHHHHHHHHHhcc
Confidence 889999996431 11111122 246999999998642 1 134566789999999888777654 22
Q ss_pred CCceEEEEecceeecCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcHHH
Q 010075 153 KLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYV 232 (519)
Q Consensus 153 ~l~~~V~vSTa~v~~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~Y~ 232 (519)
+-.++|++||...... . +....|+
T Consensus 139 ~~g~Iv~isS~~~~~~---------~-----------------------------------------------~~~~~Y~ 162 (257)
T PRK08594 139 EGGSIVTLTYLGGERV---------V-----------------------------------------------QNYNVMG 162 (257)
T ss_pred cCceEEEEcccCCccC---------C-----------------------------------------------CCCchhH
Confidence 2358999998643211 0 1124699
Q ss_pred HHHHHHHHHHHHh-----hcCCcEEEEecCccccCCCCCCCcccccccccHHHHHHhhcCCceeeccCCCceeeeeeHHH
Q 010075 233 FTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDM 307 (519)
Q Consensus 233 ~sK~~aE~lv~~~-----~~~lp~~IvRPs~V~g~~~~p~~gw~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~d~vpVDd 307 (519)
.||+..+.+.+.. ..++.+..+.||.|-.+.....++. .......... . ....+...+|
T Consensus 163 asKaal~~l~~~la~el~~~gIrvn~v~PG~v~T~~~~~~~~~-------~~~~~~~~~~----~-----p~~r~~~p~~ 226 (257)
T PRK08594 163 VAKASLEASVKYLANDLGKDGIRVNAISAGPIRTLSAKGVGGF-------NSILKEIEER----A-----PLRRTTTQEE 226 (257)
T ss_pred HHHHHHHHHHHHHHHHhhhcCCEEeeeecCcccCHhHhhhccc-------cHHHHHHhhc----C-----CccccCCHHH
Confidence 9999999888754 3579999999998876532111100 0001111000 0 1122456789
Q ss_pred HHHHHHHHHHHhccCCCCCcEEEecCC
Q 010075 308 VVNAMIVAMVAHAKQPSDANIYHVGSS 334 (519)
Q Consensus 308 va~aii~a~~~~~~~~~~~~iyni~s~ 334 (519)
++++++.++..... .-.+.+..+.+|
T Consensus 227 va~~~~~l~s~~~~-~~tG~~~~~dgg 252 (257)
T PRK08594 227 VGDTAAFLFSDLSR-GVTGENIHVDSG 252 (257)
T ss_pred HHHHHHHHcCcccc-cccceEEEECCc
Confidence 99999888753322 113566666554
|
|
| >PRK07424 bifunctional sterol desaturase/short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.43 E-value=1.8e-11 Score=127.66 Aligned_cols=107 Identities=17% Similarity=0.307 Sum_probs=79.0
Q ss_pred cCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 010075 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (519)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (519)
++||+|+||||||+||++++++|++.| .+|+++.|+... +.... ... ...+..
T Consensus 176 l~gK~VLITGASgGIG~aLA~~La~~G---~~Vi~l~r~~~~------l~~~~---------~~~---------~~~v~~ 228 (406)
T PRK07424 176 LKGKTVAVTGASGTLGQALLKELHQQG---AKVVALTSNSDK------ITLEI---------NGE---------DLPVKT 228 (406)
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCC---CEEEEEeCCHHH------HHHHH---------hhc---------CCCeEE
Confidence 478999999999999999999999988 578888876421 11000 000 124678
Q ss_pred EeccCCCCCCCCChhhhHHHHhcCccEEEEcCccCCc----cccHHHHHHHhHHHHHHHHHHHHh
Q 010075 90 VPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF----DERYDVAFGINTLGVIHLVNFAKK 150 (519)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~~~vdiViH~Aa~v~f----~~~~~~~~~~Nv~gt~~ll~~a~~ 150 (519)
+.+|+++ .+......+++|++||+||.... .+.++..+++|+.|+.++++.+.+
T Consensus 229 v~~Dvsd-------~~~v~~~l~~IDiLInnAGi~~~~~~s~e~~~~~~~vNv~g~i~Li~a~lp 286 (406)
T PRK07424 229 LHWQVGQ-------EAALAELLEKVDILIINHGINVHGERTPEAINKSYEVNTFSAWRLMELFFT 286 (406)
T ss_pred EEeeCCC-------HHHHHHHhCCCCEEEECCCcCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8999995 33344667899999999987532 235678899999999999998754
|
|
| >PRK06125 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.42 E-value=1.8e-11 Score=120.65 Aligned_cols=229 Identities=16% Similarity=0.141 Sum_probs=139.8
Q ss_pred cCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 010075 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (519)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (519)
+++|+++||||+|.||+.+++.|++.| .+|+++.|+... .+++.++ +++.. ..++..
T Consensus 5 ~~~k~vlItG~~~giG~~ia~~l~~~G---~~V~~~~r~~~~---~~~~~~~---------l~~~~--------~~~~~~ 61 (259)
T PRK06125 5 LAGKRVLITGASKGIGAAAAEAFAAEG---CHLHLVARDADA---LEALAAD---------LRAAH--------GVDVAV 61 (259)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHcC---CEEEEEeCCHHH---HHHHHHH---------HHhhc--------CCceEE
Confidence 468999999999999999999999988 578888886421 1222111 11111 246788
Q ss_pred EeccCCCCCCCCChhhhHHHH---hcCccEEEEcCccCCc-------cccHHHHHHHhHHHHHHHHHHHHh-c--cCCce
Q 010075 90 VPGDISSEDLGLKDSNLKEEL---WNELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKK-C--VKLKV 156 (519)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l---~~~vdiViH~Aa~v~f-------~~~~~~~~~~Nv~gt~~ll~~a~~-~--~~l~~ 156 (519)
+.+|+++++ + ...+ ..++|++||+|+.... .+.++..+++|+.|...+.+.+.. + .+-.+
T Consensus 62 ~~~D~~~~~------~-~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~ 134 (259)
T PRK06125 62 HALDLSSPE------A-REQLAAEAGDIDILVNNAGAIPGGGLDDVDDAAWRAGWELKVFGYIDLTRLAYPRMKARGSGV 134 (259)
T ss_pred EEecCCCHH------H-HHHHHHHhCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcE
Confidence 999999632 2 2233 3469999999997532 246778899999999988886532 2 13357
Q ss_pred EEEEecceeecCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcHHHHHHH
Q 010075 157 FVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKT 236 (519)
Q Consensus 157 ~V~vSTa~v~~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~Y~~sK~ 236 (519)
+|++||.... .. . .....|+.+|+
T Consensus 135 iv~iss~~~~--~~-------~-----------------------------------------------~~~~~y~ask~ 158 (259)
T PRK06125 135 IVNVIGAAGE--NP-------D-----------------------------------------------ADYICGSAGNA 158 (259)
T ss_pred EEEecCcccc--CC-------C-----------------------------------------------CCchHhHHHHH
Confidence 8988875321 10 0 11245899999
Q ss_pred HHHHHHHHh-----hcCCcEEEEecCccccCCCCCC-CcccccccccHHHHHHhhcCCceeeccCCCceeeeeeHHHHHH
Q 010075 237 MGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPF-PGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVN 310 (519)
Q Consensus 237 ~aE~lv~~~-----~~~lp~~IvRPs~V~g~~~~p~-~gw~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~d~vpVDdva~ 310 (519)
..+.+++.. ..++++..+.||.|-.+..... +.................. .. ....+.+++|+|+
T Consensus 159 al~~~~~~la~e~~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~----~~-----~~~~~~~~~~va~ 229 (259)
T PRK06125 159 ALMAFTRALGGKSLDDGVRVVGVNPGPVATDRMLTLLKGRARAELGDESRWQELLA----GL-----PLGRPATPEEVAD 229 (259)
T ss_pred HHHHHHHHHHHHhCccCeEEEEEecCccccHHHHHHHHhhhhcccCCHHHHHHHhc----cC-----CcCCCcCHHHHHH
Confidence 988887754 3579999999998876531100 0000000000000001000 00 1113567899999
Q ss_pred HHHHHHHHhccCCCCCcEEEecCC
Q 010075 311 AMIVAMVAHAKQPSDANIYHVGSS 334 (519)
Q Consensus 311 aii~a~~~~~~~~~~~~iyni~s~ 334 (519)
+++.++.... ..-.+.++.+.+|
T Consensus 230 ~~~~l~~~~~-~~~~G~~i~vdgg 252 (259)
T PRK06125 230 LVAFLASPRS-GYTSGTVVTVDGG 252 (259)
T ss_pred HHHHHcCchh-ccccCceEEecCC
Confidence 9988875322 1223567777665
|
|
| >PRK08690 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.42 E-value=4.1e-12 Score=125.66 Aligned_cols=228 Identities=17% Similarity=0.136 Sum_probs=135.5
Q ss_pred hcCCCEEEEeCC--ccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCc
Q 010075 9 FLENKTILVSGV--TGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEK 86 (519)
Q Consensus 9 ~~~~k~VlITGa--TGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~ 86 (519)
+++||+++|||| ++.||+++++.|++.| .+|++..|..+. .++++ ++ .++. ..
T Consensus 3 ~~~~k~~lITGa~~~~GIG~a~a~~l~~~G---~~v~~~~~~~~~---~~~~~-~~---------~~~~---------~~ 57 (261)
T PRK08690 3 FLQGKKILITGMISERSIAYGIAKACREQG---AELAFTYVVDKL---EERVR-KM---------AAEL---------DS 57 (261)
T ss_pred ccCCcEEEEECCCCCCcHHHHHHHHHHHCC---CEEEEEcCcHHH---HHHHH-HH---------Hhcc---------CC
Confidence 478999999997 6799999999999998 567776664221 12221 11 1111 22
Q ss_pred eEEEeccCCCCCCCCChhhhHHHHhcCccEEEEcCccCCc--------c----ccHHHHHHHhHHHHHHHHHHHHhc--c
Q 010075 87 ITFVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF--------D----ERYDVAFGINTLGVIHLVNFAKKC--V 152 (519)
Q Consensus 87 v~~v~gDl~~~~lgls~~~~~~~l~~~vdiViH~Aa~v~f--------~----~~~~~~~~~Nv~gt~~ll~~a~~~--~ 152 (519)
...+.+|+++++-.-.-.+.......++|++||+||.... . +.++..+++|+.|+..+.+.+..+ .
T Consensus 58 ~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~p~m~~ 137 (261)
T PRK08690 58 ELVFRCDVASDDEINQVFADLGKHWDGLDGLVHSIGFAPKEALSGDFLDSISREAFNTAHEISAYSLPALAKAARPMMRG 137 (261)
T ss_pred ceEEECCCCCHHHHHHHHHHHHHHhCCCcEEEECCccCCccccccchhhhcCHHHHHHHHHhchHHHHHHHHHHHHHhhh
Confidence 4578999996431100000111112469999999998531 1 245666889999988887765432 1
Q ss_pred CCceEEEEecceeecCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcHHH
Q 010075 153 KLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYV 232 (519)
Q Consensus 153 ~l~~~V~vSTa~v~~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~Y~ 232 (519)
+-.++|++||....... +....|+
T Consensus 138 ~~g~Iv~iss~~~~~~~--------------------------------------------------------~~~~~Y~ 161 (261)
T PRK08690 138 RNSAIVALSYLGAVRAI--------------------------------------------------------PNYNVMG 161 (261)
T ss_pred cCcEEEEEcccccccCC--------------------------------------------------------CCcccch
Confidence 22578899876432110 1234699
Q ss_pred HHHHHHHHHHHHh-----hcCCcEEEEecCccccCCCCCCCcccccccccHHHHHHhhcCCceeeccCCCceeeeeeHHH
Q 010075 233 FTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDM 307 (519)
Q Consensus 233 ~sK~~aE~lv~~~-----~~~lp~~IvRPs~V~g~~~~p~~gw~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~d~vpVDd 307 (519)
.||+..+.+.+.. ..++.+..+.||.|-.+... ++.+ .......... .. ....+...+|
T Consensus 162 asKaal~~l~~~la~e~~~~gIrVn~i~PG~v~T~~~~---~~~~----~~~~~~~~~~-~~--------p~~r~~~pee 225 (261)
T PRK08690 162 MAKASLEAGIRFTAACLGKEGIRCNGISAGPIKTLAAS---GIAD----FGKLLGHVAA-HN--------PLRRNVTIEE 225 (261)
T ss_pred hHHHHHHHHHHHHHHHhhhcCeEEEEEecCcccchhhh---cCCc----hHHHHHHHhh-cC--------CCCCCCCHHH
Confidence 9999998887654 45799999999998664321 1100 0111111111 00 1123566899
Q ss_pred HHHHHHHHHHHhccCCCCCcEEEecCC
Q 010075 308 VVNAMIVAMVAHAKQPSDANIYHVGSS 334 (519)
Q Consensus 308 va~aii~a~~~~~~~~~~~~iyni~s~ 334 (519)
||+++..++..... .-.+.++-+.+|
T Consensus 226 vA~~v~~l~s~~~~-~~tG~~i~vdgG 251 (261)
T PRK08690 226 VGNTAAFLLSDLSS-GITGEITYVDGG 251 (261)
T ss_pred HHHHHHHHhCcccC-CcceeEEEEcCC
Confidence 99999998863322 113556666554
|
|
| >PRK06997 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.42 E-value=6e-12 Score=124.47 Aligned_cols=225 Identities=17% Similarity=0.162 Sum_probs=136.8
Q ss_pred hcCCCEEEEeCC--ccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCc
Q 010075 9 FLENKTILVSGV--TGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEK 86 (519)
Q Consensus 9 ~~~~k~VlITGa--TGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~ 86 (519)
++++|+++|||| ++.||++++++|++.| .+|++..|..+.. +++. + +.++. ..
T Consensus 3 ~l~~k~vlItGas~~~GIG~a~a~~l~~~G---~~v~~~~~~~~~~---~~~~-~---------~~~~~---------~~ 57 (260)
T PRK06997 3 FLAGKRILITGLLSNRSIAYGIAKACKREG---AELAFTYVGDRFK---DRIT-E---------FAAEF---------GS 57 (260)
T ss_pred ccCCcEEEEeCCCCCCcHHHHHHHHHHHCC---CeEEEEccchHHH---HHHH-H---------HHHhc---------CC
Confidence 467999999996 6799999999999998 5667766542221 2222 1 11111 12
Q ss_pred eEEEeccCCCCCCCCChhhhHHH---HhcCccEEEEcCccCCc------------cccHHHHHHHhHHHHHHHHHHHHh-
Q 010075 87 ITFVPGDISSEDLGLKDSNLKEE---LWNELDIMVNSAAITKF------------DERYDVAFGINTLGVIHLVNFAKK- 150 (519)
Q Consensus 87 v~~v~gDl~~~~lgls~~~~~~~---l~~~vdiViH~Aa~v~f------------~~~~~~~~~~Nv~gt~~ll~~a~~- 150 (519)
..++.+|+++++- -....+. ...++|++||+||.... .+.++..+++|+.|+..+.+.+..
T Consensus 58 ~~~~~~Dv~d~~~---v~~~~~~~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~l~~~~lp~ 134 (260)
T PRK06997 58 DLVFPCDVASDEQ---IDALFASLGQHWDGLDGLVHSIGFAPREAIAGDFLDGLSRENFRIAHDISAYSFPALAKAALPM 134 (260)
T ss_pred cceeeccCCCHHH---HHHHHHHHHHHhCCCcEEEEccccCCccccccccchhcCHHHHHHHHHhhhHHHHHHHHHHHHh
Confidence 2468899996431 0111111 12469999999987521 135677799999999988887654
Q ss_pred ccCCceEEEEecceeecCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcH
Q 010075 151 CVKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNT 230 (519)
Q Consensus 151 ~~~l~~~V~vSTa~v~~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~ 230 (519)
+.+-.++|++||...... . .....
T Consensus 135 m~~~g~Ii~iss~~~~~~---------~-----------------------------------------------~~~~~ 158 (260)
T PRK06997 135 LSDDASLLTLSYLGAERV---------V-----------------------------------------------PNYNT 158 (260)
T ss_pred cCCCceEEEEeccccccC---------C-----------------------------------------------CCcch
Confidence 223367999988643210 0 12346
Q ss_pred HHHHHHHHHHHHHHh-----hcCCcEEEEecCccccCCCCCCCcccccccccHHHHHHhhcCCceeeccCCCceeeeeeH
Q 010075 231 YVFTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPV 305 (519)
Q Consensus 231 Y~~sK~~aE~lv~~~-----~~~lp~~IvRPs~V~g~~~~p~~gw~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~d~vpV 305 (519)
|+.||+..+.+.+.. ..++.+..+-||.|-.+... .+.+ ........... . ....+...
T Consensus 159 Y~asKaal~~l~~~la~el~~~gIrVn~i~PG~v~T~~~~---~~~~----~~~~~~~~~~~----~-----p~~r~~~p 222 (260)
T PRK06997 159 MGLAKASLEASVRYLAVSLGPKGIRANGISAGPIKTLAAS---GIKD----FGKILDFVESN----A-----PLRRNVTI 222 (260)
T ss_pred HHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCccccchhc---cccc----hhhHHHHHHhc----C-----cccccCCH
Confidence 999999998888754 35799999999988654221 1100 00111111100 0 11225678
Q ss_pred HHHHHHHHHHHHHhccCCCCCcEEEecCC
Q 010075 306 DMVVNAMIVAMVAHAKQPSDANIYHVGSS 334 (519)
Q Consensus 306 Ddva~aii~a~~~~~~~~~~~~iyni~s~ 334 (519)
+|+++++..++..... .-.+.++.+.+|
T Consensus 223 edva~~~~~l~s~~~~-~itG~~i~vdgg 250 (260)
T PRK06997 223 EEVGNVAAFLLSDLAS-GVTGEITHVDSG 250 (260)
T ss_pred HHHHHHHHHHhCcccc-CcceeEEEEcCC
Confidence 9999999998864221 123567766555
|
|
| >PLN02780 ketoreductase/ oxidoreductase | Back alignment and domain information |
|---|
Probab=99.42 E-value=9.1e-12 Score=126.97 Aligned_cols=174 Identities=17% Similarity=0.190 Sum_probs=116.3
Q ss_pred CCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEE
Q 010075 11 ENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFV 90 (519)
Q Consensus 11 ~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v 90 (519)
.|+.++||||||+||++++++|++.| .+|+++.|+... .+.+.+ .+++..+ ..++..+
T Consensus 52 ~g~~~lITGAs~GIG~alA~~La~~G---~~Vil~~R~~~~---l~~~~~---------~l~~~~~-------~~~~~~~ 109 (320)
T PLN02780 52 YGSWALVTGPTDGIGKGFAFQLARKG---LNLVLVARNPDK---LKDVSD---------SIQSKYS-------KTQIKTV 109 (320)
T ss_pred cCCEEEEeCCCcHHHHHHHHHHHHCC---CCEEEEECCHHH---HHHHHH---------HHHHHCC-------CcEEEEE
Confidence 48999999999999999999999988 567888887422 222221 1222211 1357788
Q ss_pred eccCCCCCCCCChhhhHHHHhc--CccEEEEcCccCC-----c----cccHHHHHHHhHHHHHHHHHHHHhc---cCCce
Q 010075 91 PGDISSEDLGLKDSNLKEELWN--ELDIMVNSAAITK-----F----DERYDVAFGINTLGVIHLVNFAKKC---VKLKV 156 (519)
Q Consensus 91 ~gDl~~~~lgls~~~~~~~l~~--~vdiViH~Aa~v~-----f----~~~~~~~~~~Nv~gt~~ll~~a~~~---~~l~~ 156 (519)
.+|+++. .. +..+...+... ++|++||+||... + .+.++..+++|+.|+..+.+.+... .+..+
T Consensus 110 ~~Dl~~~-~~-~~~~~l~~~~~~~didilVnnAG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~g~ 187 (320)
T PLN02780 110 VVDFSGD-ID-EGVKRIKETIEGLDVGVLINNVGVSYPYARFFHEVDEELLKNLIKVNVEGTTKVTQAVLPGMLKRKKGA 187 (320)
T ss_pred EEECCCC-cH-HHHHHHHHHhcCCCccEEEEecCcCCCCCcccccCCHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCcE
Confidence 8999841 00 01111112233 3669999999752 2 1346678999999999988876531 24578
Q ss_pred EEEEecceeecCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcHHHHHHH
Q 010075 157 FVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKT 236 (519)
Q Consensus 157 ~V~vSTa~v~~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~Y~~sK~ 236 (519)
+|++||........ . +....|+.||+
T Consensus 188 IV~iSS~a~~~~~~-------~-----------------------------------------------p~~~~Y~aSKa 213 (320)
T PLN02780 188 IINIGSGAAIVIPS-------D-----------------------------------------------PLYAVYAATKA 213 (320)
T ss_pred EEEEechhhccCCC-------C-----------------------------------------------ccchHHHHHHH
Confidence 99999975432100 0 12357999999
Q ss_pred HHHHHHHHh-----hcCCcEEEEecCccccC
Q 010075 237 MGEMLMQQS-----KENLSLVIIRPTVVSGT 262 (519)
Q Consensus 237 ~aE~lv~~~-----~~~lp~~IvRPs~V~g~ 262 (519)
..+.+.+.. ..++.+..+.||.|-.+
T Consensus 214 al~~~~~~L~~El~~~gI~V~~v~PG~v~T~ 244 (320)
T PLN02780 214 YIDQFSRCLYVEYKKSGIDVQCQVPLYVATK 244 (320)
T ss_pred HHHHHHHHHHHHHhccCeEEEEEeeCceecC
Confidence 998887754 35799999999988654
|
|
| >PRK05855 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.42 E-value=3.8e-12 Score=139.79 Aligned_cols=167 Identities=20% Similarity=0.154 Sum_probs=119.1
Q ss_pred cCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 010075 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (519)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (519)
+.+++++||||||+||+++++.|++.| .+|+++.|+... .+.+.++ +++ . ..++.+
T Consensus 313 ~~~~~~lv~G~s~giG~~~a~~l~~~G---~~v~~~~r~~~~---~~~~~~~---------~~~-~--------~~~~~~ 368 (582)
T PRK05855 313 FSGKLVVVTGAGSGIGRETALAFAREG---AEVVASDIDEAA---AERTAEL---------IRA-A--------GAVAHA 368 (582)
T ss_pred CCCCEEEEECCcCHHHHHHHHHHHHCC---CEEEEEeCCHHH---HHHHHHH---------HHh-c--------CCeEEE
Confidence 567899999999999999999999988 578888886422 2222211 111 0 246788
Q ss_pred EeccCCCCCCCCChhhhHHHHh-------cCccEEEEcCccCCc-------cccHHHHHHHhHHHHHHHHHHHHhc----
Q 010075 90 VPGDISSEDLGLKDSNLKEELW-------NELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKC---- 151 (519)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~-------~~vdiViH~Aa~v~f-------~~~~~~~~~~Nv~gt~~ll~~a~~~---- 151 (519)
+.+|++++. ..+.++ ..+|++||+||.... .+.++..+++|+.|+.++.+.+...
T Consensus 369 ~~~Dv~~~~-------~~~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~ 441 (582)
T PRK05855 369 YRVDVSDAD-------AMEAFAEWVRAEHGVPDIVVNNAGIGMAGGFLDTSAEDWDRVLDVNLWGVIHGCRLFGRQMVER 441 (582)
T ss_pred EEcCCCCHH-------HHHHHHHHHHHhcCCCcEEEECCccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc
Confidence 999999642 222332 358999999998642 2467778999999999988875431
Q ss_pred cCCceEEEEecceeecCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcHH
Q 010075 152 VKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTY 231 (519)
Q Consensus 152 ~~l~~~V~vSTa~v~~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~Y 231 (519)
+.-.++|++||...+... .....|
T Consensus 442 ~~~g~iv~~sS~~~~~~~--------------------------------------------------------~~~~~Y 465 (582)
T PRK05855 442 GTGGHIVNVASAAAYAPS--------------------------------------------------------RSLPAY 465 (582)
T ss_pred CCCcEEEEECChhhccCC--------------------------------------------------------CCCcHH
Confidence 113589999998765421 123579
Q ss_pred HHHHHHHHHHHHHh-----hcCCcEEEEecCccccCC
Q 010075 232 VFTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTY 263 (519)
Q Consensus 232 ~~sK~~aE~lv~~~-----~~~lp~~IvRPs~V~g~~ 263 (519)
+.||+..+.+.+.. ..++.++.+.||.|-.+.
T Consensus 466 ~~sKaa~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~ 502 (582)
T PRK05855 466 ATSKAAVLMLSECLRAELAAAGIGVTAICPGFVDTNI 502 (582)
T ss_pred HHHHHHHHHHHHHHHHHhcccCcEEEEEEeCCCcccc
Confidence 99999888777644 458999999999986653
|
|
| >PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.42 E-value=1.1e-11 Score=132.28 Aligned_cols=164 Identities=19% Similarity=0.181 Sum_probs=115.1
Q ss_pred hcCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceE
Q 010075 9 FLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKIT 88 (519)
Q Consensus 9 ~~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~ 88 (519)
.++|++++||||+|+||+.+++.|.+.| .+|+++.|+..... .+.+. ++ -+..
T Consensus 207 ~~~g~~vlItGasggIG~~la~~l~~~G---a~vi~~~~~~~~~~-l~~~~-------------~~----------~~~~ 259 (450)
T PRK08261 207 PLAGKVALVTGAARGIGAAIAEVLARDG---AHVVCLDVPAAGEA-LAAVA-------------NR----------VGGT 259 (450)
T ss_pred CCCCCEEEEecCCCHHHHHHHHHHHHCC---CEEEEEeCCccHHH-HHHHH-------------HH----------cCCe
Confidence 3578999999999999999999999988 57888887543221 11111 11 1235
Q ss_pred EEeccCCCCCCCCChhhhHHHHh-------cCccEEEEcCccCCc-------cccHHHHHHHhHHHHHHHHHHHHhc---
Q 010075 89 FVPGDISSEDLGLKDSNLKEELW-------NELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKC--- 151 (519)
Q Consensus 89 ~v~gDl~~~~lgls~~~~~~~l~-------~~vdiViH~Aa~v~f-------~~~~~~~~~~Nv~gt~~ll~~a~~~--- 151 (519)
++.+|+++++ ..+.+. .++|+|||+|+.... .+.++..+++|+.|+.++.+.+...
T Consensus 260 ~~~~Dv~~~~-------~~~~~~~~~~~~~g~id~vi~~AG~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~ 332 (450)
T PRK08261 260 ALALDITAPD-------APARIAEHLAERHGGLDIVVHNAGITRDKTLANMDEARWDSVLAVNLLAPLRITEALLAAGAL 332 (450)
T ss_pred EEEEeCCCHH-------HHHHHHHHHHHhCCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhhh
Confidence 7889999632 222222 268999999997642 2567788999999999999998752
Q ss_pred cCCceEEEEecceeecCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcHH
Q 010075 152 VKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTY 231 (519)
Q Consensus 152 ~~l~~~V~vSTa~v~~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~Y 231 (519)
.+-.+||++||....... .....|
T Consensus 333 ~~~g~iv~~SS~~~~~g~--------------------------------------------------------~~~~~Y 356 (450)
T PRK08261 333 GDGGRIVGVSSISGIAGN--------------------------------------------------------RGQTNY 356 (450)
T ss_pred cCCCEEEEECChhhcCCC--------------------------------------------------------CCChHH
Confidence 223689999987543211 112469
Q ss_pred HHHHHHHHHHHHHh-----hcCCcEEEEecCccccC
Q 010075 232 VFTKTMGEMLMQQS-----KENLSLVIIRPTVVSGT 262 (519)
Q Consensus 232 ~~sK~~aE~lv~~~-----~~~lp~~IvRPs~V~g~ 262 (519)
+.+|+..+.+++.. ..++++..+.||.|-..
T Consensus 357 ~asKaal~~~~~~la~el~~~gi~v~~v~PG~i~t~ 392 (450)
T PRK08261 357 AASKAGVIGLVQALAPLLAERGITINAVAPGFIETQ 392 (450)
T ss_pred HHHHHHHHHHHHHHHHHHhhhCcEEEEEEeCcCcch
Confidence 99999777666544 45799999999987543
|
|
| >TIGR02685 pter_reduc_Leis pteridine reductase | Back alignment and domain information |
|---|
Probab=99.41 E-value=1.1e-11 Score=122.90 Aligned_cols=224 Identities=13% Similarity=0.107 Sum_probs=133.2
Q ss_pred CEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEEec
Q 010075 13 KTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVPG 92 (519)
Q Consensus 13 k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v~g 92 (519)
++++||||+|+||++++++|++.| .+|+++.|+... ..+.+.+ .+.... ..++..+.+
T Consensus 2 ~~~lITGas~gIG~~~a~~l~~~G---~~V~~~~~~~~~--~~~~~~~---------~l~~~~--------~~~~~~~~~ 59 (267)
T TIGR02685 2 PAAVVTGAAKRIGSSIAVALHQEG---YRVVLHYHRSAA--AASTLAA---------ELNARR--------PNSAVTCQA 59 (267)
T ss_pred CEEEEeCCCCcHHHHHHHHHHhCC---CeEEEEcCCcHH--HHHHHHH---------HHHhcc--------CCceEEEEc
Confidence 579999999999999999999998 567877765321 1112111 111111 135677899
Q ss_pred cCCCCCCCCCh-hhhHHH---HhcCccEEEEcCccCCc------c------------ccHHHHHHHhHHHHHHHHHHHHh
Q 010075 93 DISSEDLGLKD-SNLKEE---LWNELDIMVNSAAITKF------D------------ERYDVAFGINTLGVIHLVNFAKK 150 (519)
Q Consensus 93 Dl~~~~lgls~-~~~~~~---l~~~vdiViH~Aa~v~f------~------------~~~~~~~~~Nv~gt~~ll~~a~~ 150 (519)
|++++...... .+..+. ....+|+|||+||.... + ..+...+++|+.|+..+.+.+..
T Consensus 60 Dv~d~~~~~~~~~~~~~~~~~~~g~iD~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~ 139 (267)
T TIGR02685 60 DLSNSATLFSRCEAIIDACFRAFGRCDVLVNNASAFYPTPLLRGDAGEGVGDKKSLEVQVAELFGSNAIAPYFLIKAFAQ 139 (267)
T ss_pred cCCCchhhHHHHHHHHHHHHHccCCceEEEECCccCCCCcccccccccccccchhhHHHHHHHHHhhhHHHHHHHHHHHH
Confidence 99975311000 111111 12469999999996421 1 12567799999999999887643
Q ss_pred c-cC--------CceEEEEecceeecCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccc
Q 010075 151 C-VK--------LKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTER 221 (519)
Q Consensus 151 ~-~~--------l~~~V~vSTa~v~~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~ 221 (519)
. .. -..++.+||...... .
T Consensus 140 ~~~~~~~~~~~~~~~iv~~~s~~~~~~---------~------------------------------------------- 167 (267)
T TIGR02685 140 RQAGTRAEQRSTNLSIVNLCDAMTDQP---------L------------------------------------------- 167 (267)
T ss_pred HhhhcccccCCCCeEEEEehhhhccCC---------C-------------------------------------------
Confidence 2 11 124566655432110 0
Q ss_pred cccCCCCcHHHHHHHHHHHHHHHh-----hcCCcEEEEecCccccCCCCCCCcccccccccHHHHHHhhcCCceeeccCC
Q 010075 222 AKLHGWPNTYVFTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGET 296 (519)
Q Consensus 222 ~~~~~~~n~Y~~sK~~aE~lv~~~-----~~~lp~~IvRPs~V~g~~~~p~~gw~~~~~~~~~~i~~~~~g~~~~~~~~~ 296 (519)
.....|+.||+..|.+++.. ..+++++.++||.+..+...+ .......... . +..
T Consensus 168 ----~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~~~~~~~~~-----------~~~~~~~~~~-~---~~~- 227 (267)
T TIGR02685 168 ----LGFTMYTMAKHALEGLTRSAALELAPLQIRVNGVAPGLSLLPDAMP-----------FEVQEDYRRK-V---PLG- 227 (267)
T ss_pred ----cccchhHHHHHHHHHHHHHHHHHHhhhCeEEEEEecCCccCccccc-----------hhHHHHHHHh-C---CCC-
Confidence 22357999999999998865 357999999999886432210 0111111110 0 100
Q ss_pred CceeeeeeHHHHHHHHHHHHHHhccCCCCCcEEEecCC
Q 010075 297 KVIMDVIPVDMVVNAMIVAMVAHAKQPSDANIYHVGSS 334 (519)
Q Consensus 297 ~~~~d~vpVDdva~aii~a~~~~~~~~~~~~iyni~s~ 334 (519)
......++++++++.++.... ..-.+.++.+.++
T Consensus 228 ---~~~~~~~~va~~~~~l~~~~~-~~~~G~~~~v~gg 261 (267)
T TIGR02685 228 ---QREASAEQIADVVIFLVSPKA-KYITGTCIKVDGG 261 (267)
T ss_pred ---cCCCCHHHHHHHHHHHhCccc-CCcccceEEECCc
Confidence 123577999999999886332 2223567777655
|
Pteridine reductase is an enzyme used by trypanosomatids (including Trypanosoma cruzi and Leishmania major) to obtain reduced pteridines by salvage rather than biosynthetic pathways. Enzymes in T. cruzi described as pteridine reductase 1 (PTR1) and pteridine reductase 2 (PTR2) have different activity profiles. PTR1 is more active with with fully oxidized biopterin and folate than with reduced forms, while PTR2 reduces dihydrobiopterin and dihydrofolate but not oxidized pteridines. T. cruzi PTR1 and PTR2 are more similar to each other in sequence than either is to the pteridine reductase of Leishmania major, and all are included in this family. |
| >PRK08177 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.41 E-value=4.3e-12 Score=122.50 Aligned_cols=166 Identities=17% Similarity=0.163 Sum_probs=111.9
Q ss_pred CEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEEec
Q 010075 13 KTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVPG 92 (519)
Q Consensus 13 k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v~g 92 (519)
|+|+||||||++|+++++.|++.| .+|+++.|+..... .+.+ ..++.++.+
T Consensus 2 k~vlItG~sg~iG~~la~~l~~~G---~~V~~~~r~~~~~~---~~~~-----------------------~~~~~~~~~ 52 (225)
T PRK08177 2 RTALIIGASRGLGLGLVDRLLERG---WQVTATVRGPQQDT---ALQA-----------------------LPGVHIEKL 52 (225)
T ss_pred CEEEEeCCCchHHHHHHHHHHhCC---CEEEEEeCCCcchH---HHHh-----------------------ccccceEEc
Confidence 689999999999999999999988 57899999864321 1110 135677889
Q ss_pred cCCCCCCCCChhhhHHHHh-cCccEEEEcCccCCc---------cccHHHHHHHhHHHHHHHHHHHHhcc--CCceEEEE
Q 010075 93 DISSEDLGLKDSNLKEELW-NELDIMVNSAAITKF---------DERYDVAFGINTLGVIHLVNFAKKCV--KLKVFVHV 160 (519)
Q Consensus 93 Dl~~~~lgls~~~~~~~l~-~~vdiViH~Aa~v~f---------~~~~~~~~~~Nv~gt~~ll~~a~~~~--~l~~~V~v 160 (519)
|+++++. -.+..+.+. .++|+|||+||.... .+.+...+.+|+.++..+++.+...- +...++++
T Consensus 53 D~~d~~~---~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~iv~~ 129 (225)
T PRK08177 53 DMNDPAS---LDQLLQRLQGQRFDLLFVNAGISGPAHQSAADATAAEIGQLFLTNAIAPIRLARRLLGQVRPGQGVLAFM 129 (225)
T ss_pred CCCCHHH---HHHHHHHhhcCCCCEEEEcCcccCCCCCCcccCCHHHHhhheeeeeeHHHHHHHHHHHhhhhcCCEEEEE
Confidence 9996321 011111221 259999999987532 13466678899999999988876431 22467778
Q ss_pred ecceeecCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcHHHHHHHHHHH
Q 010075 161 STAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEM 240 (519)
Q Consensus 161 STa~v~~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~Y~~sK~~aE~ 240 (519)
||.+..... . + ......|+.+|+..|.
T Consensus 130 ss~~g~~~~------~------~-----------------------------------------~~~~~~Y~~sK~a~~~ 156 (225)
T PRK08177 130 SSQLGSVEL------P------D-----------------------------------------GGEMPLYKASKAALNS 156 (225)
T ss_pred ccCcccccc------C------C-----------------------------------------CCCccchHHHHHHHHH
Confidence 775321110 0 0 0112359999999999
Q ss_pred HHHHh-----hcCCcEEEEecCccccCC
Q 010075 241 LMQQS-----KENLSLVIIRPTVVSGTY 263 (519)
Q Consensus 241 lv~~~-----~~~lp~~IvRPs~V~g~~ 263 (519)
+++.+ ..++.+..++||.|-.+.
T Consensus 157 ~~~~l~~e~~~~~i~v~~i~PG~i~t~~ 184 (225)
T PRK08177 157 MTRSFVAELGEPTLTVLSMHPGWVKTDM 184 (225)
T ss_pred HHHHHHHHhhcCCeEEEEEcCCceecCC
Confidence 99865 346889999999886553
|
|
| >PRK12367 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.39 E-value=6.9e-11 Score=115.90 Aligned_cols=108 Identities=14% Similarity=0.180 Sum_probs=80.0
Q ss_pred hhhcCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCc
Q 010075 7 VEFLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEK 86 (519)
Q Consensus 7 ~~~~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~ 86 (519)
++-++||+++||||+|+||+++++.|++.| .+|+++.|++... +. .. . ...
T Consensus 9 ~~~l~~k~~lITGas~gIG~ala~~l~~~G---~~Vi~~~r~~~~~-----~~-~~----------~----------~~~ 59 (245)
T PRK12367 9 QSTWQGKRIGITGASGALGKALTKAFRAKG---AKVIGLTHSKINN-----SE-SN----------D----------ESP 59 (245)
T ss_pred HHhhCCCEEEEEcCCcHHHHHHHHHHHHCC---CEEEEEECCchhh-----hh-hh----------c----------cCC
Confidence 455789999999999999999999999998 6788888875211 10 00 0 011
Q ss_pred eEEEeccCCCCCCCCChhhhHHHHhcCccEEEEcCccCCc----cccHHHHHHHhHHHHHHHHHHHHh
Q 010075 87 ITFVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF----DERYDVAFGINTLGVIHLVNFAKK 150 (519)
Q Consensus 87 v~~v~gDl~~~~lgls~~~~~~~l~~~vdiViH~Aa~v~f----~~~~~~~~~~Nv~gt~~ll~~a~~ 150 (519)
...+.+|+++ .+.......++|++||+||.... .+.++..+++|+.|+.++++.+..
T Consensus 60 ~~~~~~D~~~-------~~~~~~~~~~iDilVnnAG~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~ 120 (245)
T PRK12367 60 NEWIKWECGK-------EESLDKQLASLDVLILNHGINPGGRQDPENINKALEINALSSWRLLELFED 120 (245)
T ss_pred CeEEEeeCCC-------HHHHHHhcCCCCEEEECCccCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHH
Confidence 2567899985 33344667789999999997432 256788899999999999988754
|
|
| >PRK06603 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.39 E-value=1.1e-11 Score=122.56 Aligned_cols=226 Identities=14% Similarity=0.138 Sum_probs=137.1
Q ss_pred hhcCCCEEEEeCCcc--HHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCC
Q 010075 8 EFLENKTILVSGVTG--FVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISE 85 (519)
Q Consensus 8 ~~~~~k~VlITGaTG--FlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~ 85 (519)
..++||+++||||++ .||+++++.|++.| .+|++..|+.. ..+.++ + +.++. .
T Consensus 4 ~~~~~k~~lITGas~~~GIG~a~a~~la~~G---~~v~~~~r~~~---~~~~~~-~---------l~~~~---------g 58 (260)
T PRK06603 4 GLLQGKKGLITGIANNMSISWAIAQLAKKHG---AELWFTYQSEV---LEKRVK-P---------LAEEI---------G 58 (260)
T ss_pred cccCCcEEEEECCCCCcchHHHHHHHHHHcC---CEEEEEeCchH---HHHHHH-H---------HHHhc---------C
Confidence 346789999999997 89999999999988 56777766521 112221 1 11111 1
Q ss_pred ceEEEeccCCCCCCCCChhhhHHH---HhcCccEEEEcCccCC-------c----cccHHHHHHHhHHHHHHHHHHHHh-
Q 010075 86 KITFVPGDISSEDLGLKDSNLKEE---LWNELDIMVNSAAITK-------F----DERYDVAFGINTLGVIHLVNFAKK- 150 (519)
Q Consensus 86 ~v~~v~gDl~~~~lgls~~~~~~~---l~~~vdiViH~Aa~v~-------f----~~~~~~~~~~Nv~gt~~ll~~a~~- 150 (519)
...++.+|+++++-- ....+. ...++|++||+|+... + .+.++..+++|+.|...+++.+..
T Consensus 59 ~~~~~~~Dv~~~~~v---~~~~~~~~~~~g~iDilVnnag~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~ 135 (260)
T PRK06603 59 CNFVSELDVTNPKSI---SNLFDDIKEKWGSFDFLLHGMAFADKNELKGRYVDTSLENFHNSLHISCYSLLELSRSAEAL 135 (260)
T ss_pred CceEEEccCCCHHHH---HHHHHHHHHHcCCccEEEEccccCCcccccCccccCCHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 124578999964311 111111 1246999999998642 1 145778899999999998887643
Q ss_pred ccCCceEEEEecceeecCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcH
Q 010075 151 CVKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNT 230 (519)
Q Consensus 151 ~~~l~~~V~vSTa~v~~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~ 230 (519)
+.+-.++|++||...... . +....
T Consensus 136 m~~~G~Iv~isS~~~~~~---------~-----------------------------------------------~~~~~ 159 (260)
T PRK06603 136 MHDGGSIVTLTYYGAEKV---------I-----------------------------------------------PNYNV 159 (260)
T ss_pred hccCceEEEEecCccccC---------C-----------------------------------------------Ccccc
Confidence 322358999998543210 0 11246
Q ss_pred HHHHHHHHHHHHHHh-----hcCCcEEEEecCccccCCCCCCCcccccccccHHHHHHhhcCCceeeccCCCceeeeeeH
Q 010075 231 YVFTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPV 305 (519)
Q Consensus 231 Y~~sK~~aE~lv~~~-----~~~lp~~IvRPs~V~g~~~~p~~gw~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~d~vpV 305 (519)
|+.||+..+.+.+.. ..++.+..+-||.|-.+.....+. ........... .+ ...+...
T Consensus 160 Y~asKaal~~l~~~la~el~~~gIrVn~v~PG~v~T~~~~~~~~-------~~~~~~~~~~~----~p-----~~r~~~p 223 (260)
T PRK06603 160 MGVAKAALEASVKYLANDMGENNIRVNAISAGPIKTLASSAIGD-------FSTMLKSHAAT----AP-----LKRNTTQ 223 (260)
T ss_pred hhhHHHHHHHHHHHHHHHhhhcCeEEEEEecCcCcchhhhcCCC-------cHHHHHHHHhc----CC-----cCCCCCH
Confidence 999999998888754 457999999999986643211110 01111111110 01 1124567
Q ss_pred HHHHHHHHHHHHHhccCCCCCcEEEecCC
Q 010075 306 DMVVNAMIVAMVAHAKQPSDANIYHVGSS 334 (519)
Q Consensus 306 Ddva~aii~a~~~~~~~~~~~~iyni~s~ 334 (519)
+|+|++++.++..... .-.+.++.+.+|
T Consensus 224 edva~~~~~L~s~~~~-~itG~~i~vdgG 251 (260)
T PRK06603 224 EDVGGAAVYLFSELSK-GVTGEIHYVDCG 251 (260)
T ss_pred HHHHHHHHHHhCcccc-cCcceEEEeCCc
Confidence 9999999998863221 113566666555
|
|
| >PRK06505 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.38 E-value=8.2e-12 Score=124.31 Aligned_cols=224 Identities=15% Similarity=0.164 Sum_probs=137.2
Q ss_pred cCCCEEEEeCCcc--HHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCce
Q 010075 10 LENKTILVSGVTG--FVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKI 87 (519)
Q Consensus 10 ~~~k~VlITGaTG--FlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v 87 (519)
++||+++||||++ .||+++++.|++.| .+|++..|+... .+++. + +.++. ...
T Consensus 5 l~~k~~lVTGas~~~GIG~aiA~~la~~G---a~V~~~~r~~~~---~~~~~-~---------~~~~~---------g~~ 59 (271)
T PRK06505 5 MQGKRGLIMGVANDHSIAWGIAKQLAAQG---AELAFTYQGEAL---GKRVK-P---------LAESL---------GSD 59 (271)
T ss_pred cCCCEEEEeCCCCCCcHHHHHHHHHHhCC---CEEEEecCchHH---HHHHH-H---------HHHhc---------CCc
Confidence 6789999999997 99999999999998 577777775321 12221 1 11111 112
Q ss_pred EEEeccCCCCCCCCChhhhHHHH---hcCccEEEEcCccCC-------c----cccHHHHHHHhHHHHHHHHHHHHh-cc
Q 010075 88 TFVPGDISSEDLGLKDSNLKEEL---WNELDIMVNSAAITK-------F----DERYDVAFGINTLGVIHLVNFAKK-CV 152 (519)
Q Consensus 88 ~~v~gDl~~~~lgls~~~~~~~l---~~~vdiViH~Aa~v~-------f----~~~~~~~~~~Nv~gt~~ll~~a~~-~~ 152 (519)
..+.+|+++++- -....+.+ ...+|++||+||... + .+.++..+++|+.|+..+++.+.. +.
T Consensus 60 ~~~~~Dv~d~~~---v~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~m~ 136 (271)
T PRK06505 60 FVLPCDVEDIAS---VDAVFEALEKKWGKLDFVVHAIGFSDKNELKGRYADTTRENFSRTMVISCFSFTEIAKRAAKLMP 136 (271)
T ss_pred eEEeCCCCCHHH---HHHHHHHHHHHhCCCCEEEECCccCCCccccCChhhcCHHHHHHHHhhhhhhHHHHHHHHHHhhc
Confidence 468999996421 01111111 246999999999652 1 245778899999999998877643 32
Q ss_pred CCceEEEEecceeecCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcHHH
Q 010075 153 KLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYV 232 (519)
Q Consensus 153 ~l~~~V~vSTa~v~~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~Y~ 232 (519)
+-.++|++||....... +....|+
T Consensus 137 ~~G~Iv~isS~~~~~~~--------------------------------------------------------~~~~~Y~ 160 (271)
T PRK06505 137 DGGSMLTLTYGGSTRVM--------------------------------------------------------PNYNVMG 160 (271)
T ss_pred cCceEEEEcCCCccccC--------------------------------------------------------Cccchhh
Confidence 22579999986432110 1124699
Q ss_pred HHHHHHHHHHHHh-----hcCCcEEEEecCccccCCCCCCCcccccccccHHHHHHhhcCCceeeccCCCceeeeeeHHH
Q 010075 233 FTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDM 307 (519)
Q Consensus 233 ~sK~~aE~lv~~~-----~~~lp~~IvRPs~V~g~~~~p~~gw~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~d~vpVDd 307 (519)
.||+..+.+.+.. ..++.+..+.||.|-.+.....+ + ........ .... + ..-+...+|
T Consensus 161 asKaAl~~l~r~la~el~~~gIrVn~v~PG~i~T~~~~~~~---~----~~~~~~~~-~~~~---p-----~~r~~~pee 224 (271)
T PRK06505 161 VAKAALEASVRYLAADYGPQGIRVNAISAGPVRTLAGAGIG---D----ARAIFSYQ-QRNS---P-----LRRTVTIDE 224 (271)
T ss_pred hhHHHHHHHHHHHHHHHhhcCeEEEEEecCCccccccccCc---c----hHHHHHHH-hhcC---C-----ccccCCHHH
Confidence 9999988887754 35799999999998765321110 0 00011111 1100 1 112345789
Q ss_pred HHHHHHHHHHHhccCCCCCcEEEecCC
Q 010075 308 VVNAMIVAMVAHAKQPSDANIYHVGSS 334 (519)
Q Consensus 308 va~aii~a~~~~~~~~~~~~iyni~s~ 334 (519)
+|++++.++..... .-.+.+..+.+|
T Consensus 225 va~~~~fL~s~~~~-~itG~~i~vdgG 250 (271)
T PRK06505 225 VGGSALYLLSDLSS-GVTGEIHFVDSG 250 (271)
T ss_pred HHHHHHHHhCcccc-ccCceEEeecCC
Confidence 99999988753221 123567777665
|
|
| >PRK07889 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.37 E-value=2.2e-11 Score=120.15 Aligned_cols=224 Identities=16% Similarity=0.114 Sum_probs=137.1
Q ss_pred cCCCEEEEeCC--ccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCce
Q 010075 10 LENKTILVSGV--TGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKI 87 (519)
Q Consensus 10 ~~~k~VlITGa--TGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v 87 (519)
+++|+++|||| ++.||.++++.|++.| .+|++..|+... ...+.+. ++. ..++
T Consensus 5 ~~~k~~lItGa~~s~GIG~a~a~~la~~G---~~v~l~~r~~~~-~~~~~~~-------------~~~--------~~~~ 59 (256)
T PRK07889 5 LEGKRILVTGVITDSSIAFHVARVAQEQG---AEVVLTGFGRAL-RLTERIA-------------KRL--------PEPA 59 (256)
T ss_pred ccCCEEEEeCCCCcchHHHHHHHHHHHCC---CEEEEecCccch-hHHHHHH-------------Hhc--------CCCC
Confidence 57899999999 8999999999999988 678888876421 1112221 111 1356
Q ss_pred EEEeccCCCCCCCCChhhhHHH---HhcCccEEEEcCccCC-------cc----ccHHHHHHHhHHHHHHHHHHHHh-cc
Q 010075 88 TFVPGDISSEDLGLKDSNLKEE---LWNELDIMVNSAAITK-------FD----ERYDVAFGINTLGVIHLVNFAKK-CV 152 (519)
Q Consensus 88 ~~v~gDl~~~~lgls~~~~~~~---l~~~vdiViH~Aa~v~-------f~----~~~~~~~~~Nv~gt~~ll~~a~~-~~ 152 (519)
.++.+|++++... ....+. ...++|++||+||... +. +.+...+++|+.|+..+.+.+.. +.
T Consensus 60 ~~~~~Dv~~~~~i---~~~~~~~~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~m~ 136 (256)
T PRK07889 60 PVLELDVTNEEHL---ASLADRVREHVDGLDGVVHSIGFAPQSALGGNFLDAPWEDVATALHVSAYSLKSLAKALLPLMN 136 (256)
T ss_pred cEEeCCCCCHHHH---HHHHHHHHHHcCCCcEEEEccccccccccCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHhcc
Confidence 7899999964210 111111 1246999999999752 21 34566789999999988877653 22
Q ss_pred CCceEEEEecceeecCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcHHH
Q 010075 153 KLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYV 232 (519)
Q Consensus 153 ~l~~~V~vSTa~v~~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~Y~ 232 (519)
+-.++|++|+....+ . .....|+
T Consensus 137 ~~g~Iv~is~~~~~~----------~-----------------------------------------------~~~~~Y~ 159 (256)
T PRK07889 137 EGGSIVGLDFDATVA----------W-----------------------------------------------PAYDWMG 159 (256)
T ss_pred cCceEEEEeeccccc----------C-----------------------------------------------CccchhH
Confidence 224788877532110 0 1124589
Q ss_pred HHHHHHHHHHHHh-----hcCCcEEEEecCccccCCCCCCCcccccccccHHHHHHhhcCCceeeccCCCceeeeeeHHH
Q 010075 233 FTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDM 307 (519)
Q Consensus 233 ~sK~~aE~lv~~~-----~~~lp~~IvRPs~V~g~~~~p~~gw~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~d~vpVDd 307 (519)
.||+..+.+.+.. ..++.+..+.||.|-.+..+..++. .......... .+. ...+...+|
T Consensus 160 asKaal~~l~~~la~el~~~gIrvn~v~PG~v~T~~~~~~~~~-------~~~~~~~~~~----~p~----~~~~~~p~e 224 (256)
T PRK07889 160 VAKAALESTNRYLARDLGPRGIRVNLVAAGPIRTLAAKAIPGF-------ELLEEGWDER----APL----GWDVKDPTP 224 (256)
T ss_pred HHHHHHHHHHHHHHHHhhhcCeEEEeeccCcccChhhhcccCc-------HHHHHHHHhc----Ccc----ccccCCHHH
Confidence 9999988887754 4579999999999876543222211 0111111100 000 012467899
Q ss_pred HHHHHHHHHHHhccCCCCCcEEEecCC
Q 010075 308 VVNAMIVAMVAHAKQPSDANIYHVGSS 334 (519)
Q Consensus 308 va~aii~a~~~~~~~~~~~~iyni~s~ 334 (519)
+|++++.++..... .-.+.++.+.++
T Consensus 225 vA~~v~~l~s~~~~-~~tG~~i~vdgg 250 (256)
T PRK07889 225 VARAVVALLSDWFP-ATTGEIVHVDGG 250 (256)
T ss_pred HHHHHHHHhCcccc-cccceEEEEcCc
Confidence 99999988753222 123566666554
|
|
| >PRK06924 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.37 E-value=5.4e-12 Score=123.60 Aligned_cols=161 Identities=16% Similarity=0.200 Sum_probs=109.2
Q ss_pred CEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEEec
Q 010075 13 KTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVPG 92 (519)
Q Consensus 13 k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v~g 92 (519)
|+|+||||||+||+.++++|++.| .+|+++.|.... ++. ++ .+. ...+++++.+
T Consensus 2 k~vlItGasggiG~~ia~~l~~~g---~~V~~~~r~~~~-----~~~-~~---------~~~--------~~~~~~~~~~ 55 (251)
T PRK06924 2 RYVIITGTSQGLGEAIANQLLEKG---THVISISRTENK-----ELT-KL---------AEQ--------YNSNLTFHSL 55 (251)
T ss_pred cEEEEecCCchHHHHHHHHHHhcC---CEEEEEeCCchH-----HHH-HH---------Hhc--------cCCceEEEEe
Confidence 689999999999999999999988 578888886521 111 01 010 1256889999
Q ss_pred cCCCCCCCCChhhhHHHHhcC---------c--cEEEEcCccCCc--------cccHHHHHHHhHHHHHHHHHHHHh---
Q 010075 93 DISSEDLGLKDSNLKEELWNE---------L--DIMVNSAAITKF--------DERYDVAFGINTLGVIHLVNFAKK--- 150 (519)
Q Consensus 93 Dl~~~~lgls~~~~~~~l~~~---------v--diViH~Aa~v~f--------~~~~~~~~~~Nv~gt~~ll~~a~~--- 150 (519)
|+++++ ..+.+.++ . .++||+||.... .+.+...+++|+.|+..+++.+..
T Consensus 56 D~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~v~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~ 128 (251)
T PRK06924 56 DLQDVH-------ELETNFNEILSSIQEDNVSSIHLINNAGMVAPIKPIEKAESEELITNVHLNLLAPMILTSTFMKHTK 128 (251)
T ss_pred cCCCHH-------HHHHHHHHHHHhcCcccCCceEEEEcceecccCcccccCCHHHHHHHhccceehHHHHHHHHHHHHh
Confidence 999642 22233321 1 279999987532 145667788899997776655533
Q ss_pred -ccCCceEEEEecceeecCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCc
Q 010075 151 -CVKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPN 229 (519)
Q Consensus 151 -~~~l~~~V~vSTa~v~~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n 229 (519)
.+..+++|++||..+... + ....
T Consensus 129 ~~~~~~~iv~~sS~~~~~~---------~-----------------------------------------------~~~~ 152 (251)
T PRK06924 129 DWKVDKRVINISSGAAKNP---------Y-----------------------------------------------FGWS 152 (251)
T ss_pred ccCCCceEEEecchhhcCC---------C-----------------------------------------------CCcH
Confidence 223468999999754211 1 2235
Q ss_pred HHHHHHHHHHHHHHHh-------hcCCcEEEEecCccccC
Q 010075 230 TYVFTKTMGEMLMQQS-------KENLSLVIIRPTVVSGT 262 (519)
Q Consensus 230 ~Y~~sK~~aE~lv~~~-------~~~lp~~IvRPs~V~g~ 262 (519)
.|+.+|+..|.+++.+ ..++.+..++||.+-.+
T Consensus 153 ~Y~~sKaa~~~~~~~la~e~~~~~~~i~v~~v~Pg~v~t~ 192 (251)
T PRK06924 153 AYCSSKAGLDMFTQTVATEQEEEEYPVKIVAFSPGVMDTN 192 (251)
T ss_pred HHhHHHHHHHHHHHHHHHHhhhcCCCeEEEEecCCccccH
Confidence 7999999999998754 13688999999987654
|
|
| >PRK07984 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.37 E-value=1e-11 Score=123.00 Aligned_cols=221 Identities=15% Similarity=0.184 Sum_probs=136.3
Q ss_pred hcCCCEEEEeCCcc--HHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCc
Q 010075 9 FLENKTILVSGVTG--FVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEK 86 (519)
Q Consensus 9 ~~~~k~VlITGaTG--FlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~ 86 (519)
+++||+++||||++ .||+++++.|++.| .+|++..|+.+. .+.+. ++ ..+ ..+
T Consensus 3 ~l~~k~~lITGas~~~GIG~aia~~la~~G---~~vil~~r~~~~---~~~~~-~~---------~~~---------~~~ 57 (262)
T PRK07984 3 FLSGKRILVTGVASKLSIAYGIAQAMHREG---AELAFTYQNDKL---KGRVE-EF---------AAQ---------LGS 57 (262)
T ss_pred ccCCCEEEEeCCCCCccHHHHHHHHHHHCC---CEEEEEecchhH---HHHHH-HH---------Hhc---------cCC
Confidence 36799999999985 89999999999998 567777775221 11111 11 111 124
Q ss_pred eEEEeccCCCCCCCCChhhhHHHH-------hcCccEEEEcCccCCc------------cccHHHHHHHhHHHHHHHHHH
Q 010075 87 ITFVPGDISSEDLGLKDSNLKEEL-------WNELDIMVNSAAITKF------------DERYDVAFGINTLGVIHLVNF 147 (519)
Q Consensus 87 v~~v~gDl~~~~lgls~~~~~~~l-------~~~vdiViH~Aa~v~f------------~~~~~~~~~~Nv~gt~~ll~~ 147 (519)
+.++.+|+++++ ..+.+ ..++|++||+||.... .+.++..+++|+.|...+.+.
T Consensus 58 ~~~~~~Dl~~~~-------~v~~~~~~~~~~~g~iD~linnAg~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~ 130 (262)
T PRK07984 58 DIVLPCDVAEDA-------SIDAMFAELGKVWPKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKA 130 (262)
T ss_pred ceEeecCCCCHH-------HHHHHHHHHHhhcCCCCEEEECCccCCccccCCcchhhcCHHHHHHHhhhhhHHHHHHHHH
Confidence 567899999642 22222 2358999999986421 134567789999998888887
Q ss_pred HHhc-cCCceEEEEecceeecCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCC
Q 010075 148 AKKC-VKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHG 226 (519)
Q Consensus 148 a~~~-~~l~~~V~vSTa~v~~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~ 226 (519)
+..+ .+-.++|++||...... . +
T Consensus 131 ~~~~~~~~g~Iv~iss~~~~~~---------~-----------------------------------------------~ 154 (262)
T PRK07984 131 CRSMLNPGSALLTLSYLGAERA---------I-----------------------------------------------P 154 (262)
T ss_pred HHHHhcCCcEEEEEecCCCCCC---------C-----------------------------------------------C
Confidence 6543 12257889988643210 0 1
Q ss_pred CCcHHHHHHHHHHHHHHHh-----hcCCcEEEEecCccccCCCCCCCcccccccccHHHHHHhhcCCceeeccCCCceee
Q 010075 227 WPNTYVFTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMD 301 (519)
Q Consensus 227 ~~n~Y~~sK~~aE~lv~~~-----~~~lp~~IvRPs~V~g~~~~p~~gw~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~d 301 (519)
....|+.||+..+.+++.. ..++.+..+-||.|-.+.....+ + ........... . ...-
T Consensus 155 ~~~~Y~asKaal~~l~~~la~el~~~gIrVn~i~PG~v~T~~~~~~~---~----~~~~~~~~~~~----~-----p~~r 218 (262)
T PRK07984 155 NYNVMGLAKASLEANVRYMANAMGPEGVRVNAISAGPIRTLAASGIK---D----FRKMLAHCEAV----T-----PIRR 218 (262)
T ss_pred CcchhHHHHHHHHHHHHHHHHHhcccCcEEeeeecCcccchHHhcCC---c----hHHHHHHHHHc----C-----CCcC
Confidence 1346999999999888755 34799999999988654221000 0 00111111100 0 1122
Q ss_pred eeeHHHHHHHHHHHHHHhccCCCCCcEEEecCC
Q 010075 302 VIPVDMVVNAMIVAMVAHAKQPSDANIYHVGSS 334 (519)
Q Consensus 302 ~vpVDdva~aii~a~~~~~~~~~~~~iyni~s~ 334 (519)
+...+||+++++.++..... .-.+.++.+.++
T Consensus 219 ~~~pedva~~~~~L~s~~~~-~itG~~i~vdgg 250 (262)
T PRK07984 219 TVTIEDVGNSAAFLCSDLSA-GISGEVVHVDGG 250 (262)
T ss_pred CCCHHHHHHHHHHHcCcccc-cccCcEEEECCC
Confidence 46779999999988753222 123566666555
|
|
| >PRK05884 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.35 E-value=2.1e-11 Score=117.69 Aligned_cols=195 Identities=12% Similarity=0.022 Sum_probs=128.4
Q ss_pred CEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEEec
Q 010075 13 KTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVPG 92 (519)
Q Consensus 13 k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v~g 92 (519)
|+++||||+|+||+++++.|++.| .+|+++.|+... .+.+. ++ .++.++.+
T Consensus 1 m~vlItGas~giG~~ia~~l~~~g---~~v~~~~r~~~~---~~~~~-------------~~----------~~~~~~~~ 51 (223)
T PRK05884 1 VEVLVTGGDTDLGRTIAEGFRNDG---HKVTLVGARRDD---LEVAA-------------KE----------LDVDAIVC 51 (223)
T ss_pred CeEEEEeCCchHHHHHHHHHHHCC---CEEEEEeCCHHH---HHHHH-------------Hh----------ccCcEEec
Confidence 469999999999999999999988 578888886321 11111 00 13567889
Q ss_pred cCCCCCCCCChhhhHHHHh----cCccEEEEcCccC---------Cc---cccHHHHHHHhHHHHHHHHHHHHh-ccCCc
Q 010075 93 DISSEDLGLKDSNLKEELW----NELDIMVNSAAIT---------KF---DERYDVAFGINTLGVIHLVNFAKK-CVKLK 155 (519)
Q Consensus 93 Dl~~~~lgls~~~~~~~l~----~~vdiViH~Aa~v---------~f---~~~~~~~~~~Nv~gt~~ll~~a~~-~~~l~ 155 (519)
|++++ +..+.+. +++|++||+|+.. .+ .+.++..+++|+.|+..+++.+.. +..-.
T Consensus 52 D~~~~-------~~v~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~g 124 (223)
T PRK05884 52 DNTDP-------ASLEEARGLFPHHLDTIVNVPAPSWDAGDPRTYSLADTANAWRNALDATVLSAVLTVQSVGDHLRSGG 124 (223)
T ss_pred CCCCH-------HHHHHHHHHHhhcCcEEEECCCccccCCCCcccchhcCHHHHHHHHHHHHHHHHHHHHHHHHHhhcCC
Confidence 99963 2222333 3689999999742 11 245778899999999999988754 22336
Q ss_pred eEEEEecceeecCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcHHHHHH
Q 010075 156 VFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTK 235 (519)
Q Consensus 156 ~~V~vSTa~v~~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~Y~~sK 235 (519)
++|++||.. . .....|+.||
T Consensus 125 ~Iv~isS~~--~----------------------------------------------------------~~~~~Y~asK 144 (223)
T PRK05884 125 SIISVVPEN--P----------------------------------------------------------PAGSAEAAIK 144 (223)
T ss_pred eEEEEecCC--C----------------------------------------------------------CCccccHHHH
Confidence 899998853 0 0124699999
Q ss_pred HHHHHHHHHh-----hcCCcEEEEecCccccCCCCCCCcccccccccHHHHHHhhcCCceeeccCCCceeeeeeHHHHHH
Q 010075 236 TMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVN 310 (519)
Q Consensus 236 ~~aE~lv~~~-----~~~lp~~IvRPs~V~g~~~~p~~gw~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~d~vpVDdva~ 310 (519)
+..+.+++.. ..++.+..+.||.+..+.. ... .. .+ .-..+|+++
T Consensus 145 aal~~~~~~la~e~~~~gI~v~~v~PG~v~t~~~-----------------~~~--~~---~p--------~~~~~~ia~ 194 (223)
T PRK05884 145 AALSNWTAGQAAVFGTRGITINAVACGRSVQPGY-----------------DGL--SR---TP--------PPVAAEIAR 194 (223)
T ss_pred HHHHHHHHHHHHHhhhcCeEEEEEecCccCchhh-----------------hhc--cC---CC--------CCCHHHHHH
Confidence 9999888754 3579999999988754311 000 00 00 015689999
Q ss_pred HHHHHHHHhccCCCCCcEEEecCC
Q 010075 311 AMIVAMVAHAKQPSDANIYHVGSS 334 (519)
Q Consensus 311 aii~a~~~~~~~~~~~~iyni~s~ 334 (519)
++..++..... .-.+++..+.+|
T Consensus 195 ~~~~l~s~~~~-~v~G~~i~vdgg 217 (223)
T PRK05884 195 LALFLTTPAAR-HITGQTLHVSHG 217 (223)
T ss_pred HHHHHcCchhh-ccCCcEEEeCCC
Confidence 99887753222 123566666555
|
|
| >COG0702 Predicted nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.35 E-value=1.1e-10 Score=115.68 Aligned_cols=205 Identities=19% Similarity=0.176 Sum_probs=139.7
Q ss_pred CEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEEec
Q 010075 13 KTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVPG 92 (519)
Q Consensus 13 k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v~g 92 (519)
++|+|||||||+|+++++.|++.+ ++|.+++|+....... ...+.++.+
T Consensus 1 ~~ilV~GatG~~G~~~~~~L~~~~---~~v~~~~r~~~~~~~~----------------------------~~~v~~~~~ 49 (275)
T COG0702 1 MKILVTGATGFVGGAVVRELLARG---HEVRAAVRNPEAAAAL----------------------------AGGVEVVLG 49 (275)
T ss_pred CeEEEEecccchHHHHHHHHHhCC---CEEEEEEeCHHHHHhh----------------------------cCCcEEEEe
Confidence 579999999999999999999997 7889999986443211 146889999
Q ss_pred cCCCCCCCCChhhhHHHHhcCccEEEEcCccCCccccHHHHHHHhHHHHHHHHHHHHhccCCceEEEEecceeecCcCCe
Q 010075 93 DISSEDLGLKDSNLKEELWNELDIMVNSAAITKFDERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAYVAGERTGL 172 (519)
Q Consensus 93 Dl~~~~lgls~~~~~~~l~~~vdiViH~Aa~v~f~~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V~vSTa~v~~~~~~~ 172 (519)
|+.+ .........+++.++++.+... .+. ........+..+..+.+. .+.++++++|......
T Consensus 50 d~~~-------~~~l~~a~~G~~~~~~i~~~~~-~~~--~~~~~~~~~~~~~a~~a~--~~~~~~~~~s~~~~~~----- 112 (275)
T COG0702 50 DLRD-------PKSLVAGAKGVDGVLLISGLLD-GSD--AFRAVQVTAVVRAAEAAG--AGVKHGVSLSVLGADA----- 112 (275)
T ss_pred ccCC-------HhHHHHHhccccEEEEEecccc-ccc--chhHHHHHHHHHHHHHhc--CCceEEEEeccCCCCC-----
Confidence 9995 4444577789999999988765 433 223333444444444444 2577888888764322
Q ss_pred eecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcHHHHHHHHHHHHHHHhhcCCcEE
Q 010075 173 ILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLMQQSKENLSLV 252 (519)
Q Consensus 173 i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~Y~~sK~~aE~lv~~~~~~lp~~ 252 (519)
..+..|..+|..+|+++.+ .+++.+
T Consensus 113 -----------------------------------------------------~~~~~~~~~~~~~e~~l~~--sg~~~t 137 (275)
T COG0702 113 -----------------------------------------------------ASPSALARAKAAVEAALRS--SGIPYT 137 (275)
T ss_pred -----------------------------------------------------CCccHHHHHHHHHHHHHHh--cCCCeE
Confidence 1245699999999999998 789999
Q ss_pred EEecCccccCCCCCCCcccccccccHHHHHHhhcCCceeeccCCCceeeeeeHHHHHHHHHHHHHHhccCCCCCcEEEec
Q 010075 253 IIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMIVAMVAHAKQPSDANIYHVG 332 (519)
Q Consensus 253 IvRPs~V~g~~~~p~~gw~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~d~vpVDdva~aii~a~~~~~~~~~~~~iyni~ 332 (519)
++||...+...... . .......+......+. .....+.++|++.++..++..+. ..+.+|.++
T Consensus 138 ~lr~~~~~~~~~~~----------~--~~~~~~~~~~~~~~~~--~~~~~i~~~d~a~~~~~~l~~~~---~~~~~~~l~ 200 (275)
T COG0702 138 TLRRAAFYLGAGAA----------F--IEAAEAAGLPVIPRGI--GRLSPIAVDDVAEALAAALDAPA---TAGRTYELA 200 (275)
T ss_pred EEecCeeeeccchh----------H--HHHHHhhCCceecCCC--CceeeeEHHHHHHHHHHHhcCCc---ccCcEEEcc
Confidence 99976655543311 0 1222233332222223 37889999999999988886433 236899998
Q ss_pred CCCCC
Q 010075 333 SSLRN 337 (519)
Q Consensus 333 s~~~~ 337 (519)
+....
T Consensus 201 g~~~~ 205 (275)
T COG0702 201 GPEAL 205 (275)
T ss_pred CCcee
Confidence 87443
|
|
| >PRK08340 glucose-1-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.34 E-value=1.8e-11 Score=120.76 Aligned_cols=162 Identities=14% Similarity=0.076 Sum_probs=108.6
Q ss_pred CEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEEec
Q 010075 13 KTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVPG 92 (519)
Q Consensus 13 k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v~g 92 (519)
|+|+||||+|.||+.++++|++.| .+|+++.|+... .++..+++ ++ ..++.++.+
T Consensus 1 m~vlItGas~gIG~aia~~l~~~G---~~V~~~~r~~~~---~~~~~~~l---------~~----------~~~~~~~~~ 55 (259)
T PRK08340 1 MNVLVTASSRGIGFNVARELLKKG---ARVVISSRNEEN---LEKALKEL---------KE----------YGEVYAVKA 55 (259)
T ss_pred CeEEEEcCCcHHHHHHHHHHHHcC---CEEEEEeCCHHH---HHHHHHHH---------Hh----------cCCceEEEc
Confidence 579999999999999999999998 578888886422 12221111 10 135788999
Q ss_pred cCCCCCCCCChhhhHHHH-------hcCccEEEEcCccCC-----cc----ccHHHHHHHhHHHHHHHHHHH----Hhcc
Q 010075 93 DISSEDLGLKDSNLKEEL-------WNELDIMVNSAAITK-----FD----ERYDVAFGINTLGVIHLVNFA----KKCV 152 (519)
Q Consensus 93 Dl~~~~lgls~~~~~~~l-------~~~vdiViH~Aa~v~-----f~----~~~~~~~~~Nv~gt~~ll~~a----~~~~ 152 (519)
|+++++ + .+.+ ..++|+|||+||... +. +.+...+.+|+.++..+...+ .+-.
T Consensus 56 Dv~d~~------~-~~~~~~~~~~~~g~id~li~naG~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~ 128 (259)
T PRK08340 56 DLSDKD------D-LKNLVKEAWELLGGIDALVWNAGNVRCEPCMLHEAGYSDWLEAALLHLVAPGYLTTLLIQAWLEKK 128 (259)
T ss_pred CCCCHH------H-HHHHHHHHHHhcCCCCEEEECCCCCCCCccccccccHHHHHHHHhhcchHHHHHHHHHHHHHHhcC
Confidence 999632 2 2222 246999999999742 11 345556778888866554433 2112
Q ss_pred CCceEEEEecceeecCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcHHH
Q 010075 153 KLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYV 232 (519)
Q Consensus 153 ~l~~~V~vSTa~v~~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~Y~ 232 (519)
+..++|++||....... +....|+
T Consensus 129 ~~g~iv~isS~~~~~~~--------------------------------------------------------~~~~~y~ 152 (259)
T PRK08340 129 MKGVLVYLSSVSVKEPM--------------------------------------------------------PPLVLAD 152 (259)
T ss_pred CCCEEEEEeCcccCCCC--------------------------------------------------------CCchHHH
Confidence 34689999998543211 1234699
Q ss_pred HHHHHHHHHHHHh-----hcCCcEEEEecCccccC
Q 010075 233 FTKTMGEMLMQQS-----KENLSLVIIRPTVVSGT 262 (519)
Q Consensus 233 ~sK~~aE~lv~~~-----~~~lp~~IvRPs~V~g~ 262 (519)
.+|+..+.+.+.. ..++.+..+.||.|-.+
T Consensus 153 ~sKaa~~~~~~~la~e~~~~gI~v~~v~pG~v~t~ 187 (259)
T PRK08340 153 VTRAGLVQLAKGVSRTYGGKGIRAYTVLLGSFDTP 187 (259)
T ss_pred HHHHHHHHHHHHHHHHhCCCCEEEEEeccCcccCc
Confidence 9999998888765 34788999999987654
|
|
| >PRK06940 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.34 E-value=3.7e-11 Score=119.85 Aligned_cols=247 Identities=12% Similarity=0.084 Sum_probs=139.4
Q ss_pred CCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEEe
Q 010075 12 NKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVP 91 (519)
Q Consensus 12 ~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v~ 91 (519)
+|+++|||| |+||+++++.|. .| .+|+++.|+... .+.+.++ ++.. ..++.++.
T Consensus 2 ~k~~lItGa-~gIG~~la~~l~-~G---~~Vv~~~r~~~~---~~~~~~~---------l~~~---------~~~~~~~~ 55 (275)
T PRK06940 2 KEVVVVIGA-GGIGQAIARRVG-AG---KKVLLADYNEEN---LEAAAKT---------LREA---------GFDVSTQE 55 (275)
T ss_pred CCEEEEECC-ChHHHHHHHHHh-CC---CEEEEEeCCHHH---HHHHHHH---------HHhc---------CCeEEEEE
Confidence 578999998 789999999996 57 688998886422 1111111 1110 24678899
Q ss_pred ccCCCCCCCCChhhhHHHHh------cCccEEEEcCccCCccccHHHHHHHhHHHHHHHHHHHHhc-cCCceEEEEecce
Q 010075 92 GDISSEDLGLKDSNLKEELW------NELDIMVNSAAITKFDERYDVAFGINTLGVIHLVNFAKKC-VKLKVFVHVSTAY 164 (519)
Q Consensus 92 gDl~~~~lgls~~~~~~~l~------~~vdiViH~Aa~v~f~~~~~~~~~~Nv~gt~~ll~~a~~~-~~l~~~V~vSTa~ 164 (519)
+|+++++ + .+.++ ..+|++||+||.....++++..+++|+.|+.++++.+.+. ..-.++|++||..
T Consensus 56 ~Dv~d~~------~-i~~~~~~~~~~g~id~li~nAG~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~g~iv~isS~~ 128 (275)
T PRK06940 56 VDVSSRE------S-VKALAATAQTLGPVTGLVHTAGVSPSQASPEAILKVDLYGTALVLEEFGKVIAPGGAGVVIASQS 128 (275)
T ss_pred eecCCHH------H-HHHHHHHHHhcCCCCEEEECCCcCCchhhHHHHHHHhhHHHHHHHHHHHHHHhhCCCEEEEEecc
Confidence 9999642 2 22222 3699999999986656778899999999999999987642 2224567777764
Q ss_pred eecCcCCeeec--ccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcHHHHHHHHHHHHH
Q 010075 165 VAGERTGLILE--NPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLM 242 (519)
Q Consensus 165 v~~~~~~~i~E--~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~Y~~sK~~aE~lv 242 (519)
...... ...+ .... ..+ ...+.. +..++ +.........|+.||+..+.+.
T Consensus 129 ~~~~~~-~~~~~~~~~~---~~~---------------------~~~~~~-~~~~~--~~~~~~~~~~Y~asKaa~~~~~ 180 (275)
T PRK06940 129 GHRLPA-LTAEQERALA---TTP---------------------TEELLS-LPFLQ--PDAIEDSLHAYQIAKRANALRV 180 (275)
T ss_pred cccCcc-cchhhhcccc---ccc---------------------cccccc-ccccc--ccccCCccchhHHHHHHHHHHH
Confidence 432110 0000 0000 000 000000 00000 0000012357999999988887
Q ss_pred HHh-----hcCCcEEEEecCccccCCCCCCCcccccccccHHHHHHhhcCCceeeccCCCceeeeeeHHHHHHHHHHHHH
Q 010075 243 QQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMIVAMV 317 (519)
Q Consensus 243 ~~~-----~~~lp~~IvRPs~V~g~~~~p~~gw~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~d~vpVDdva~aii~a~~ 317 (519)
+.. ..++.+..+.||.|-.+.... .+... .......... . .+ ..-+...+|+|+++..++.
T Consensus 181 ~~la~e~~~~gIrvn~i~PG~v~T~~~~~--~~~~~---~~~~~~~~~~-~---~p-----~~r~~~peeia~~~~fL~s 246 (275)
T PRK06940 181 MAEAVKWGERGARINSISPGIISTPLAQD--ELNGP---RGDGYRNMFA-K---SP-----AGRPGTPDEIAALAEFLMG 246 (275)
T ss_pred HHHHHHHccCCeEEEEeccCcCcCccchh--hhcCC---chHHHHHHhh-h---CC-----cccCCCHHHHHHHHHHHcC
Confidence 643 357999999999987754211 00000 0001111110 0 01 1225678999999988875
Q ss_pred HhccCCCCCcEEEecCC
Q 010075 318 AHAKQPSDANIYHVGSS 334 (519)
Q Consensus 318 ~~~~~~~~~~iyni~s~ 334 (519)
.... .-.+.++.+.+|
T Consensus 247 ~~~~-~itG~~i~vdgg 262 (275)
T PRK06940 247 PRGS-FITGSDFLVDGG 262 (275)
T ss_pred cccC-cccCceEEEcCC
Confidence 3222 123566777665
|
|
| >KOG1372 consensus GDP-mannose 4,6 dehydratase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.33 E-value=1.8e-11 Score=114.75 Aligned_cols=258 Identities=16% Similarity=0.186 Sum_probs=166.8
Q ss_pred hhcCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCce
Q 010075 8 EFLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKI 87 (519)
Q Consensus 8 ~~~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v 87 (519)
.|-..|..||||-||-=|++|+|.||..| .+|..++|..+.-. ..|++ .+...|. .......
T Consensus 24 ~~r~rkvALITGItGQDGSYLaEfLL~Kg---YeVHGiiRRsSsFN-T~RIe-HlY~nP~-------------~h~~~~m 85 (376)
T KOG1372|consen 24 AFRPRKVALITGITGQDGSYLAEFLLSKG---YEVHGIIRRSSSFN-TARIE-HLYSNPH-------------THNGASM 85 (376)
T ss_pred CcccceEEEEecccCCCchHHHHHHHhCC---ceeeEEEeeccccc-hhhhh-hhhcCch-------------hccccee
Confidence 34445689999999999999999999999 56678888765432 23443 1211110 1113567
Q ss_pred EEEeccCCCCCCCCChhhhHHHHhc--CccEEEEcCccCC----ccccHHHHHHHhHHHHHHHHHHHHhcc--CCceEEE
Q 010075 88 TFVPGDISSEDLGLKDSNLKEELWN--ELDIMVNSAAITK----FDERYDVAFGINTLGVIHLVNFAKKCV--KLKVFVH 159 (519)
Q Consensus 88 ~~v~gDl~~~~lgls~~~~~~~l~~--~vdiViH~Aa~v~----f~~~~~~~~~~Nv~gt~~ll~~a~~~~--~l~~~V~ 159 (519)
....||+++ ...+..+++ +++-|+|+||..+ |+- .+...++...||.+||++.+.|. +--+|-.
T Consensus 86 kLHYgDmTD-------ss~L~k~I~~ikPtEiYnLaAQSHVkvSFdl-peYTAeVdavGtLRlLdAi~~c~l~~~VrfYQ 157 (376)
T KOG1372|consen 86 KLHYGDMTD-------SSCLIKLISTIKPTEVYNLAAQSHVKVSFDL-PEYTAEVDAVGTLRLLDAIRACRLTEKVRFYQ 157 (376)
T ss_pred EEeeccccc-------hHHHHHHHhccCchhhhhhhhhcceEEEeec-ccceeeccchhhhhHHHHHHhcCcccceeEEe
Confidence 889999995 333336665 5889999999864 432 23335667789999999998872 2247899
Q ss_pred EecceeecCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcHHHHHHHHHH
Q 010075 160 VSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGE 239 (519)
Q Consensus 160 vSTa~v~~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~Y~~sK~~aE 239 (519)
.||...||.. .|.|..|..|. .|.++|+.+|..+-
T Consensus 158 AstSElyGkv----~e~PQsE~TPF-----------------------------------------yPRSPYa~aKmy~~ 192 (376)
T KOG1372|consen 158 ASTSELYGKV----QEIPQSETTPF-----------------------------------------YPRSPYAAAKMYGY 192 (376)
T ss_pred cccHhhcccc----cCCCcccCCCC-----------------------------------------CCCChhHHhhhhhe
Confidence 9999999853 34444433332 56789999998876
Q ss_pred HHHHHh--hcCCcEEEEecCccccCCCCCCCcccccccccHHHHHHhhcCCceee-ccCCCceeeeeeHHHHHHHHHHHH
Q 010075 240 MLMQQS--KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCL-VGETKVIMDVIPVDMVVNAMIVAM 316 (519)
Q Consensus 240 ~lv~~~--~~~lp~~IvRPs~V~g~~~~p~~gw~~~~~~~~~~i~~~~~g~~~~~-~~~~~~~~d~vpVDdva~aii~a~ 316 (519)
-++-.+ ..++=.| -||.+. .+.|..|-.--..-+++.+..+..|....+ .|+-+..+||-|..|-+.||...+
T Consensus 193 WivvNyREAYnmfAc---NGILFN-HESPRRGenFVTRKItRsvakI~~gqqe~~~LGNL~a~RDWGhA~dYVEAMW~mL 268 (376)
T KOG1372|consen 193 WIVVNYREAYNMFAC---NGILFN-HESPRRGENFVTRKITRSVAKISLGQQEKIELGNLSALRDWGHAGDYVEAMWLML 268 (376)
T ss_pred EEEEEhHHhhcceee---ccEeec-CCCCccccchhhHHHHHHHHHhhhcceeeEEecchhhhcccchhHHHHHHHHHHH
Confidence 655433 2222111 133333 233443321111234444555555655433 588899999999999999999998
Q ss_pred HHhccCCCCCcEEEecCCCCCchhHHHHH
Q 010075 317 VAHAKQPSDANIYHVGSSLRNPVTLGLQV 345 (519)
Q Consensus 317 ~~~~~~~~~~~iyni~s~~~~~i~~~~~~ 345 (519)
....+ .-|-+.+|+..+++.++..
T Consensus 269 Q~d~P-----dDfViATge~hsVrEF~~~ 292 (376)
T KOG1372|consen 269 QQDSP-----DDFVIATGEQHSVREFCNL 292 (376)
T ss_pred hcCCC-----CceEEecCCcccHHHHHHH
Confidence 75433 3588999988886654433
|
|
| >PRK05599 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=99.33 E-value=1.1e-10 Score=114.37 Aligned_cols=197 Identities=17% Similarity=0.150 Sum_probs=122.6
Q ss_pred CEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEEec
Q 010075 13 KTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVPG 92 (519)
Q Consensus 13 k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v~g 92 (519)
|+++||||++.||+.++++|.+ | .+|+++.|+... .+.+.+ .+++. + ..++.++.+
T Consensus 1 ~~vlItGas~GIG~aia~~l~~-g---~~Vil~~r~~~~---~~~~~~---------~l~~~-~-------~~~~~~~~~ 56 (246)
T PRK05599 1 MSILILGGTSDIAGEIATLLCH-G---EDVVLAARRPEA---AQGLAS---------DLRQR-G-------ATSVHVLSF 56 (246)
T ss_pred CeEEEEeCccHHHHHHHHHHhC-C---CEEEEEeCCHHH---HHHHHH---------HHHhc-c-------CCceEEEEc
Confidence 6799999999999999999984 6 678888886422 222221 11111 1 135788999
Q ss_pred cCCCCCCCCChhhhHHHHhcCccEEEEcCccCCcc-------ccHHHHHHHhHHHHHHHHHHH----HhccCCceEEEEe
Q 010075 93 DISSEDLGLKDSNLKEELWNELDIMVNSAAITKFD-------ERYDVAFGINTLGVIHLVNFA----KKCVKLKVFVHVS 161 (519)
Q Consensus 93 Dl~~~~lgls~~~~~~~l~~~vdiViH~Aa~v~f~-------~~~~~~~~~Nv~gt~~ll~~a----~~~~~l~~~V~vS 161 (519)
|+++++..-...+...+...++|++||+||..... +.......+|+.+...++..+ .+.++-.++|++|
T Consensus 57 Dv~d~~~v~~~~~~~~~~~g~id~lv~nag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~~g~Iv~is 136 (246)
T PRK05599 57 DAQDLDTHRELVKQTQELAGEISLAVVAFGILGDQERAETDEAHAVEIATVDYTAQVSMLTVLADELRAQTAPAAIVAFS 136 (246)
T ss_pred ccCCHHHHHHHHHHHHHhcCCCCEEEEecCcCCCchhhhcCcHHHHHHHHHHHHhHHHHHHHHHHHHHhcCCCCEEEEEe
Confidence 99975421111111112234699999999975321 123455678888877665544 2211236899999
Q ss_pred cceeecCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcHHHHHHHHHHHH
Q 010075 162 TAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEML 241 (519)
Q Consensus 162 Ta~v~~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~Y~~sK~~aE~l 241 (519)
|....-.. .....|+.||+..+.+
T Consensus 137 S~~~~~~~--------------------------------------------------------~~~~~Y~asKaa~~~~ 160 (246)
T PRK05599 137 SIAGWRAR--------------------------------------------------------RANYVYGSTKAGLDAF 160 (246)
T ss_pred ccccccCC--------------------------------------------------------cCCcchhhHHHHHHHH
Confidence 97532111 1134699999988877
Q ss_pred HHHh-----hcCCcEEEEecCccccCCCCCCCcccccccccHHHHHHhhcCCceeeccCCCceeeeeeHHHHHHHHHHHH
Q 010075 242 MQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMIVAM 316 (519)
Q Consensus 242 v~~~-----~~~lp~~IvRPs~V~g~~~~p~~gw~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~d~vpVDdva~aii~a~ 316 (519)
.+.. ..++.+..+-||.|..+..... . +. + . ....+++|++++.++
T Consensus 161 ~~~la~el~~~~I~v~~v~PG~v~T~~~~~~-------------------~-----~~-~---~-~~~pe~~a~~~~~~~ 211 (246)
T PRK05599 161 CQGLADSLHGSHVRLIIARPGFVIGSMTTGM-------------------K-----PA-P---M-SVYPRDVAAAVVSAI 211 (246)
T ss_pred HHHHHHHhcCCCceEEEecCCcccchhhcCC-------------------C-----CC-C---C-CCCHHHHHHHHHHHH
Confidence 7654 3578899999998866432100 0 00 0 0 146799999999988
Q ss_pred HH
Q 010075 317 VA 318 (519)
Q Consensus 317 ~~ 318 (519)
.+
T Consensus 212 ~~ 213 (246)
T PRK05599 212 TS 213 (246)
T ss_pred hc
Confidence 74
|
|
| >PF00106 adh_short: short chain dehydrogenase alcohol dehydrogenase superfamily signature glucose/ribitol dehydrogenase family signature; InterPro: IPR002198 The short-chain dehydrogenases/reductases family (SDR) [] is a very large family of enzymes, most of which are known to be NAD- or NADP-dependent oxidoreductases | Back alignment and domain information |
|---|
Probab=99.31 E-value=4.1e-11 Score=109.69 Aligned_cols=125 Identities=24% Similarity=0.316 Sum_probs=91.9
Q ss_pred CEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEEec
Q 010075 13 KTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVPG 92 (519)
Q Consensus 13 k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v~g 92 (519)
|+++||||+|.||+.+++.|++.|. ++|+++.|+ ......+.+. +.++.. ..++.++++
T Consensus 1 k~~lItGa~~giG~~~a~~l~~~g~--~~v~~~~r~-~~~~~~~~l~---------~~l~~~---------~~~~~~~~~ 59 (167)
T PF00106_consen 1 KTVLITGASSGIGRALARALARRGA--RVVILTSRS-EDSEGAQELI---------QELKAP---------GAKITFIEC 59 (167)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHTTT--EEEEEEESS-CHHHHHHHHH---------HHHHHT---------TSEEEEEES
T ss_pred CEEEEECCCCHHHHHHHHHHHhcCc--eEEEEeeec-cccccccccc---------cccccc---------ccccccccc
Confidence 6899999999999999999999853 678888887 1111122221 122211 378899999
Q ss_pred cCCCCCCCCChhhhHHHHh-------cCccEEEEcCccCCc-------cccHHHHHHHhHHHHHHHHHHHHhccCCceEE
Q 010075 93 DISSEDLGLKDSNLKEELW-------NELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKCVKLKVFV 158 (519)
Q Consensus 93 Dl~~~~lgls~~~~~~~l~-------~~vdiViH~Aa~v~f-------~~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V 158 (519)
|++++ +..+.+. ..+|++||+|+.... .+.++..+++|+.+...+.+++.. ++-.++|
T Consensus 60 D~~~~-------~~~~~~~~~~~~~~~~ld~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~-~~~g~iv 131 (167)
T PF00106_consen 60 DLSDP-------ESIRALIEEVIKRFGPLDILINNAGIFSDGSLDDLSEEELERVFRVNLFGPFLLAKALLP-QGGGKIV 131 (167)
T ss_dssp ETTSH-------HHHHHHHHHHHHHHSSESEEEEECSCTTSBSGGGSHHHHHHHHHHHHTHHHHHHHHHHHH-HTTEEEE
T ss_pred ccccc-------ccccccccccccccccccccccccccccccccccccchhhhhccccccceeeeeeehhee-ccccceE
Confidence 99963 2222332 369999999998752 256788899999999999999888 5788999
Q ss_pred EEecceee
Q 010075 159 HVSTAYVA 166 (519)
Q Consensus 159 ~vSTa~v~ 166 (519)
++||....
T Consensus 132 ~~sS~~~~ 139 (167)
T PF00106_consen 132 NISSIAGV 139 (167)
T ss_dssp EEEEGGGT
T ss_pred Eecchhhc
Confidence 99997543
|
As the first member of this family to be characterised was Drosophila alcohol dehydrogenase, this family used to be called [, , ] 'insect-type', or 'short-chain' alcohol dehydrogenases. Most member of this family are proteins of about 250 to 300 amino acid residues. Most dehydrogenases possess at least 2 domains [], the first binding the coenzyme, often NAD, and the second binding the substrate. This latter domain determines the substrate specificity and contains amino acids involved in catalysis. Little sequence similarity has been found in the coenzyme binding domain although there is a large degree of structural similarity, and it has therefore been suggested that the structure of dehydrogenases has arisen through gene fusion of a common ancestral coenzyme nucleotide sequence with various substrate specific domains [].; GO: 0016491 oxidoreductase activity, 0008152 metabolic process; PDB: 3QWI_D 3QWF_G 3IS3_A 3QWH_C 3ITD_A 3L77_A 1HDC_C 2HSD_C 3KVO_A 3KZV_A .... |
| >KOG2774 consensus NAD dependent epimerase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.30 E-value=2.5e-11 Score=113.07 Aligned_cols=236 Identities=18% Similarity=0.209 Sum_probs=156.1
Q ss_pred cCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 010075 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (519)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (519)
-+..+|||||+-|-+|..++..|... ++-..|++-.--|..... .+.--+
T Consensus 42 ~~~PrvLITG~LGQLG~~~A~LLR~~-yGs~~VILSDI~KPp~~V-----------------------------~~~GPy 91 (366)
T KOG2774|consen 42 QKAPRVLITGSLGQLGRGLASLLRYM-YGSECVILSDIVKPPANV-----------------------------TDVGPY 91 (366)
T ss_pred CCCCeEEEecchHHHhHHHHHHHHHH-hCCccEehhhccCCchhh-----------------------------cccCCc
Confidence 34578999999999999988755443 333344432222221110 122345
Q ss_pred EeccCCCCCCCCChhhhHHHHh--cCccEEEEcCccCC-c-cccHHHHHHHhHHHHHHHHHHHHhccCCceEEEEeccee
Q 010075 90 VPGDISSEDLGLKDSNLKEELW--NELDIMVNSAAITK-F-DERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAYV 165 (519)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~--~~vdiViH~Aa~v~-f-~~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V~vSTa~v 165 (519)
+..|+.+ .... +++. .++|..||..|..+ + ..+...+.++|+.|..|+++.|++. +++-|| -||..+
T Consensus 92 Iy~DILD------~K~L-~eIVVn~RIdWL~HfSALLSAvGE~NVpLA~~VNI~GvHNil~vAa~~-kL~iFV-PSTIGA 162 (366)
T KOG2774|consen 92 IYLDILD------QKSL-EEIVVNKRIDWLVHFSALLSAVGETNVPLALQVNIRGVHNILQVAAKH-KLKVFV-PSTIGA 162 (366)
T ss_pred hhhhhhc------cccH-HHhhcccccceeeeHHHHHHHhcccCCceeeeecchhhhHHHHHHHHc-CeeEee-cccccc
Confidence 6778774 2232 2333 36999999988754 2 3455677899999999999999996 777655 789998
Q ss_pred ecCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcHHHHHHHHHHHHHHHh
Q 010075 166 AGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLMQQS 245 (519)
Q Consensus 166 ~~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~Y~~sK~~aE~lv~~~ 245 (519)
+|..+. -++++.+ -...+...|+.||.-||-+-..+
T Consensus 163 FGPtSP------RNPTPdl--------------------------------------tIQRPRTIYGVSKVHAEL~GEy~ 198 (366)
T KOG2774|consen 163 FGPTSP------RNPTPDL--------------------------------------TIQRPRTIYGVSKVHAELLGEYF 198 (366)
T ss_pred cCCCCC------CCCCCCe--------------------------------------eeecCceeechhHHHHHHHHHHH
Confidence 886431 1111111 12256788999999999887766
Q ss_pred --hcCCcEEEEecCccccCCCCCCCcccccccccHHHHHHhhcCCceeeccCCCceeeeeeHHHHHHHHHHHHHHhccCC
Q 010075 246 --KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMIVAMVAHAKQP 323 (519)
Q Consensus 246 --~~~lp~~IvRPs~V~g~~~~p~~gw~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~d~vpVDdva~aii~a~~~~~~~~ 323 (519)
+.++++..+|...+.+... |-.|-.| +....+-.+..+|+- ..+..++.+..+++..|+..+++..+......
T Consensus 199 ~hrFg~dfr~~rfPg~is~~~-pgggttd--ya~A~f~~Al~~gk~-tCylrpdtrlpmmy~~dc~~~~~~~~~a~~~~- 273 (366)
T KOG2774|consen 199 NHRFGVDFRSMRFPGIISATK-PGGGTTD--YAIAIFYDALQKGKH-TCYLRPDTRLPMMYDTDCMASVIQLLAADSQS- 273 (366)
T ss_pred HhhcCccceecccCcccccCC-CCCCcch--hHHHHHHHHHHcCCc-ccccCCCccCceeehHHHHHHHHHHHhCCHHH-
Confidence 6689999999887777654 3334333 333334445556654 45667889999999999999999988643322
Q ss_pred CCCcEEEecC
Q 010075 324 SDANIYHVGS 333 (519)
Q Consensus 324 ~~~~iyni~s 333 (519)
-...+||+++
T Consensus 274 lkrr~ynvt~ 283 (366)
T KOG2774|consen 274 LKRRTYNVTG 283 (366)
T ss_pred hhhheeeece
Confidence 1247999976
|
|
| >PRK06484 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.30 E-value=3.9e-11 Score=130.50 Aligned_cols=168 Identities=17% Similarity=0.177 Sum_probs=116.8
Q ss_pred cCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 010075 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (519)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (519)
.+||+++||||+++||+++++.|++.| .+|+++.|+.... +.+. ++. ..++.+
T Consensus 3 ~~~k~~lITGas~gIG~aia~~l~~~G---~~V~~~~r~~~~~---~~~~-------------~~~--------~~~~~~ 55 (520)
T PRK06484 3 AQSRVVLVTGAAGGIGRAACQRFARAG---DQVVVADRNVERA---RERA-------------DSL--------GPDHHA 55 (520)
T ss_pred CCCeEEEEECCCcHHHHHHHHHHHHCC---CEEEEEeCCHHHH---HHHH-------------HHh--------CCceeE
Confidence 468999999999999999999999998 5788888864221 1111 111 245678
Q ss_pred EeccCCCCCCCCChhhhHHHH---hcCccEEEEcCccCC-----c----cccHHHHHHHhHHHHHHHHHHHHhc---cCC
Q 010075 90 VPGDISSEDLGLKDSNLKEEL---WNELDIMVNSAAITK-----F----DERYDVAFGINTLGVIHLVNFAKKC---VKL 154 (519)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l---~~~vdiViH~Aa~v~-----f----~~~~~~~~~~Nv~gt~~ll~~a~~~---~~l 154 (519)
+.+|+++++- -....+.+ ..++|++||+||... + .+.++..+++|+.|+..+++.+.+. .+-
T Consensus 56 ~~~D~~~~~~---~~~~~~~~~~~~g~iD~li~nag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~ 132 (520)
T PRK06484 56 LAMDVSDEAQ---IREGFEQLHREFGRIDVLVNNAGVTDPTMTATLDTTLEEFARLQAINLTGAYLVAREALRLMIEQGH 132 (520)
T ss_pred EEeccCCHHH---HHHHHHHHHHHhCCCCEEEECCCcCCCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCC
Confidence 9999996421 01111111 246999999998631 1 2457788999999999998877643 122
Q ss_pred -ceEEEEecceeecCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcHHHH
Q 010075 155 -KVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVF 233 (519)
Q Consensus 155 -~~~V~vSTa~v~~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~Y~~ 233 (519)
.++|++||....... .....|+.
T Consensus 133 g~~iv~isS~~~~~~~--------------------------------------------------------~~~~~Y~a 156 (520)
T PRK06484 133 GAAIVNVASGAGLVAL--------------------------------------------------------PKRTAYSA 156 (520)
T ss_pred CCeEEEECCcccCCCC--------------------------------------------------------CCCchHHH
Confidence 389999987543211 12357999
Q ss_pred HHHHHHHHHHHh-----hcCCcEEEEecCccccCC
Q 010075 234 TKTMGEMLMQQS-----KENLSLVIIRPTVVSGTY 263 (519)
Q Consensus 234 sK~~aE~lv~~~-----~~~lp~~IvRPs~V~g~~ 263 (519)
||+..+.+++.. ..++.++.+.||.|-.+.
T Consensus 157 sKaal~~l~~~la~e~~~~~i~v~~i~Pg~v~t~~ 191 (520)
T PRK06484 157 SKAAVISLTRSLACEWAAKGIRVNAVLPGYVRTQM 191 (520)
T ss_pred HHHHHHHHHHHHHHHhhhhCeEEEEEccCCcCchh
Confidence 999999988754 347999999999886554
|
|
| >PRK08303 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.29 E-value=1.2e-10 Score=117.95 Aligned_cols=176 Identities=15% Similarity=0.077 Sum_probs=113.1
Q ss_pred cCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcc-------cHHHHHHHHHhhhhhHHHHHhhhccccccc
Q 010075 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADID-------SAALRFQNEVLAKDVFNVLKEKWGTRLNSF 82 (519)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~-------~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~ 82 (519)
++||+++||||++.||+++++.|++.| .+|++..|+.... ...+.+.+ .+.. .
T Consensus 6 l~~k~~lITGgs~GIG~aia~~la~~G---~~Vv~~~r~~~~~~~~~~~~~~~~~~~~---------~l~~-~------- 65 (305)
T PRK08303 6 LRGKVALVAGATRGAGRGIAVELGAAG---ATVYVTGRSTRARRSEYDRPETIEETAE---------LVTA-A------- 65 (305)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCC---CEEEEEecccccccccccccchHHHHHH---------HHHh-c-------
Confidence 678999999999999999999999988 5788888874321 11111111 1111 0
Q ss_pred cCCceEEEeccCCCCCCCCChhhhHHHH---hcCccEEEEcC-ccC-------Cc----cccHHHHHHHhHHHHHHHHHH
Q 010075 83 ISEKITFVPGDISSEDLGLKDSNLKEEL---WNELDIMVNSA-AIT-------KF----DERYDVAFGINTLGVIHLVNF 147 (519)
Q Consensus 83 ~~~~v~~v~gDl~~~~lgls~~~~~~~l---~~~vdiViH~A-a~v-------~f----~~~~~~~~~~Nv~gt~~ll~~ 147 (519)
..++.++.+|++++.- -....+.+ ..++|++||+| +.. .+ .+.+...+++|+.|+..+.+.
T Consensus 66 -~~~~~~~~~Dv~~~~~---v~~~~~~~~~~~g~iDilVnnA~g~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~ 141 (305)
T PRK08303 66 -GGRGIAVQVDHLVPEQ---VRALVERIDREQGRLDILVNDIWGGEKLFEWGKPVWEHSLDKGLRMLRLAIDTHLITSHF 141 (305)
T ss_pred -CCceEEEEcCCCCHHH---HHHHHHHHHHHcCCccEEEECCcccccccccCCchhhcCHHHHHHHHHHhhHHHHHHHHH
Confidence 2457789999996421 11111111 24699999999 632 11 134566788999998888777
Q ss_pred HHh-c--cCCceEEEEecceeecCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhcccccccc
Q 010075 148 AKK-C--VKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKL 224 (519)
Q Consensus 148 a~~-~--~~l~~~V~vSTa~v~~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~ 224 (519)
+.+ + .+-.++|++||....-... .+
T Consensus 142 ~lp~m~~~~~g~IV~isS~~~~~~~~------~~---------------------------------------------- 169 (305)
T PRK08303 142 ALPLLIRRPGGLVVEITDGTAEYNAT------HY---------------------------------------------- 169 (305)
T ss_pred HHHHhhhCCCcEEEEECCccccccCc------CC----------------------------------------------
Confidence 654 2 1235899999853211000 00
Q ss_pred CCCCcHHHHHHHHHHHHHHHh-----hcCCcEEEEecCccccC
Q 010075 225 HGWPNTYVFTKTMGEMLMQQS-----KENLSLVIIRPTVVSGT 262 (519)
Q Consensus 225 ~~~~n~Y~~sK~~aE~lv~~~-----~~~lp~~IvRPs~V~g~ 262 (519)
.....|+.||+..+.+.+.. ..++.+..+.||.|-.+
T Consensus 170 -~~~~~Y~asKaal~~lt~~La~el~~~gIrVn~v~PG~v~T~ 211 (305)
T PRK08303 170 -RLSVFYDLAKTSVNRLAFSLAHELAPHGATAVALTPGWLRSE 211 (305)
T ss_pred -CCcchhHHHHHHHHHHHHHHHHHhhhcCcEEEEecCCccccH
Confidence 11235999999988887654 34799999999987554
|
|
| >TIGR01289 LPOR light-dependent protochlorophyllide reductase | Back alignment and domain information |
|---|
Probab=99.27 E-value=7.5e-11 Score=119.94 Aligned_cols=130 Identities=18% Similarity=0.166 Sum_probs=86.2
Q ss_pred CCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEEe
Q 010075 12 NKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVP 91 (519)
Q Consensus 12 ~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v~ 91 (519)
+++++||||||.||.++++.|++.|+ .+|+++.|+... .+.+.++ +.. ...++..+.
T Consensus 3 ~k~vlITGas~GIG~aia~~L~~~G~--~~V~l~~r~~~~---~~~~~~~---------l~~---------~~~~~~~~~ 59 (314)
T TIGR01289 3 KPTVIITGASSGLGLYAAKALAATGE--WHVIMACRDFLK---AEQAAKS---------LGM---------PKDSYTIMH 59 (314)
T ss_pred CCEEEEECCCChHHHHHHHHHHHcCC--CEEEEEeCCHHH---HHHHHHH---------hcC---------CCCeEEEEE
Confidence 68999999999999999999999873 467888886422 1111111 100 124678899
Q ss_pred ccCCCCCCCCChhhhHHHH---hcCccEEEEcCccCCc--------cccHHHHHHHhHHHHHHHHHHHHh----cc-CCc
Q 010075 92 GDISSEDLGLKDSNLKEEL---WNELDIMVNSAAITKF--------DERYDVAFGINTLGVIHLVNFAKK----CV-KLK 155 (519)
Q Consensus 92 gDl~~~~lgls~~~~~~~l---~~~vdiViH~Aa~v~f--------~~~~~~~~~~Nv~gt~~ll~~a~~----~~-~l~ 155 (519)
+|+++++-. ....+.+ ..++|++||+||.... .+.++..+++|+.|+..+.+.+.. .+ +..
T Consensus 60 ~Dl~~~~~v---~~~~~~~~~~~~~iD~lI~nAG~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~g 136 (314)
T TIGR01289 60 LDLGSLDSV---RQFVQQFRESGRPLDALVCNAAVYFPTAKEPRFTADGFELSVGTNHLGHFLLCNLLLDDLKNSPNKDK 136 (314)
T ss_pred cCCCCHHHH---HHHHHHHHHhCCCCCEEEECCCccccCccccccCHHHHHHHHhhhhhHHHHHHHHHHHHHHhCCCCCC
Confidence 999964210 1111122 2469999999996421 145677899999998888666533 21 136
Q ss_pred eEEEEecceeec
Q 010075 156 VFVHVSTAYVAG 167 (519)
Q Consensus 156 ~~V~vSTa~v~~ 167 (519)
++|++||...+.
T Consensus 137 ~IV~vsS~~~~~ 148 (314)
T TIGR01289 137 RLIIVGSITGNT 148 (314)
T ss_pred eEEEEecCcccc
Confidence 899999987654
|
This model represents the light-dependent, NADPH-dependent form of protochlorophyllide reductase. It belongs to the short chain alcohol dehydrogenase family, in contrast to the nitrogenase-related light-independent form. |
| >KOG1201 consensus Hydroxysteroid 17-beta dehydrogenase 11 [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=99.26 E-value=3.3e-10 Score=110.47 Aligned_cols=201 Identities=14% Similarity=0.177 Sum_probs=131.4
Q ss_pred cCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 010075 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (519)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (519)
.+|+.||||||++.+|+.++.++++.| .++.+-..++.+....-+.. ++ ..++..
T Consensus 36 v~g~~vLITGgg~GlGr~ialefa~rg---~~~vl~Din~~~~~etv~~~------------~~----------~g~~~~ 90 (300)
T KOG1201|consen 36 VSGEIVLITGGGSGLGRLIALEFAKRG---AKLVLWDINKQGNEETVKEI------------RK----------IGEAKA 90 (300)
T ss_pred ccCCEEEEeCCCchHHHHHHHHHHHhC---CeEEEEeccccchHHHHHHH------------Hh----------cCceeE
Confidence 578999999999999999999999998 56777777765542211110 00 036889
Q ss_pred EeccCCCCCCCCChhhhHHHHhcCccEEEEcCccCCc-------cccHHHHHHHhHHHHHH----HHHHHHhccCCceEE
Q 010075 90 VPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF-------DERYDVAFGINTLGVIH----LVNFAKKCVKLKVFV 158 (519)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~~~vdiViH~Aa~v~f-------~~~~~~~~~~Nv~gt~~----ll~~a~~~~~l~~~V 158 (519)
..+|+++++---.-.+.+++-..+||++||+||.+.. ++..+..+++|+.|... ++....+. +-.++|
T Consensus 91 y~cdis~~eei~~~a~~Vk~e~G~V~ILVNNAGI~~~~~ll~~~d~ei~k~~~vN~~~~f~t~kaFLP~M~~~-~~GHIV 169 (300)
T KOG1201|consen 91 YTCDISDREEIYRLAKKVKKEVGDVDILVNNAGIVTGKKLLDCSDEEIQKTFDVNTIAHFWTTKAFLPKMLEN-NNGHIV 169 (300)
T ss_pred EEecCCCHHHHHHHHHHHHHhcCCceEEEeccccccCCCccCCCHHHHHHHHHHhhHHHHHHHHHHhHHHHhc-CCceEE
Confidence 9999997421100111112223469999999999853 46788889999998655 44444553 567899
Q ss_pred EEecceeecCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcHHHHHHHHH
Q 010075 159 HVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMG 238 (519)
Q Consensus 159 ~vSTa~v~~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~Y~~sK~~a 238 (519)
-++|..-.... ...-.|+.||+.+
T Consensus 170 ~IaS~aG~~g~--------------------------------------------------------~gl~~YcaSK~a~ 193 (300)
T KOG1201|consen 170 TIASVAGLFGP--------------------------------------------------------AGLADYCASKFAA 193 (300)
T ss_pred EehhhhcccCC--------------------------------------------------------ccchhhhhhHHHH
Confidence 99887543221 1234699999988
Q ss_pred HHHHHHh--------hcCCcEEEEecCccccCCCCCCCcccccccccHHHHHHhhcCCceeeccCCCceeeeeeHHHHHH
Q 010075 239 EMLMQQS--------KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVN 310 (519)
Q Consensus 239 E~lv~~~--------~~~lp~~IvRPs~V~g~~~~p~~gw~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~d~vpVDdva~ 310 (519)
..+.+.. ..++.++.+=|+.+=.. ++. | ...-......++.++||+
T Consensus 194 vGfhesL~~EL~~~~~~~IktTlv~P~~i~Tg-----------------mf~----~-----~~~~~~l~P~L~p~~va~ 247 (300)
T KOG1201|consen 194 VGFHESLSMELRALGKDGIKTTLVCPYFINTG-----------------MFD----G-----ATPFPTLAPLLEPEYVAK 247 (300)
T ss_pred HHHHHHHHHHHHhcCCCCeeEEEEeeeecccc-----------------ccC----C-----CCCCccccCCCCHHHHHH
Confidence 6555432 34577888887766421 111 1 011123456789999999
Q ss_pred HHHHHHHH
Q 010075 311 AMIVAMVA 318 (519)
Q Consensus 311 aii~a~~~ 318 (519)
.++.+...
T Consensus 248 ~Iv~ai~~ 255 (300)
T KOG1201|consen 248 RIVEAILT 255 (300)
T ss_pred HHHHHHHc
Confidence 99999874
|
|
| >TIGR01500 sepiapter_red sepiapterin reductase | Back alignment and domain information |
|---|
Probab=99.25 E-value=2e-10 Score=113.08 Aligned_cols=168 Identities=17% Similarity=0.186 Sum_probs=109.7
Q ss_pred EEEEeCCccHHHHHHHHHHHH----hCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 010075 14 TILVSGVTGFVAKVFIEKILR----VQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (519)
Q Consensus 14 ~VlITGaTGFlG~~Lv~~LL~----~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (519)
.++||||||+||.+++++|++ .| .+|+++.|+... .+.+.++ ++...+ ..++.+
T Consensus 2 ~vlItGas~GIG~~~a~~la~~~~~~g---~~V~~~~r~~~~---~~~~~~~---------l~~~~~-------~~~v~~ 59 (256)
T TIGR01500 2 VCLVTGASRGFGRTIAQELAKCLKSPG---SVLVLSARNDEA---LRQLKAE---------IGAERS-------GLRVVR 59 (256)
T ss_pred EEEEecCCCchHHHHHHHHHHhhccCC---cEEEEEEcCHHH---HHHHHHH---------HHhcCC-------CceEEE
Confidence 589999999999999999997 45 578888886422 1222211 111111 246788
Q ss_pred EeccCCCCCCCCChhhhHHHHhc-------CccEEEEcCccCC-----cc-----ccHHHHHHHhHHHHHHHHHHHHhc-
Q 010075 90 VPGDISSEDLGLKDSNLKEELWN-------ELDIMVNSAAITK-----FD-----ERYDVAFGINTLGVIHLVNFAKKC- 151 (519)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~~-------~vdiViH~Aa~v~-----f~-----~~~~~~~~~Nv~gt~~ll~~a~~~- 151 (519)
+.+|++++.- -.+..+.+.+ +.|++||+||... +. +.++..+++|+.|+..+.+.+.+.
T Consensus 60 ~~~Dl~~~~~---v~~~~~~~~~~~g~~~~~~~~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~~~l 136 (256)
T TIGR01500 60 VSLDLGAEAG---LEQLLKALRELPRPKGLQRLLLINNAGTLGDVSKGFVDLSDSTQVQNYWALNLTSMLCLTSSVLKAF 136 (256)
T ss_pred EEeccCCHHH---HHHHHHHHHhccccCCCceEEEEeCCcccCccccccccCCCHHHHHHHHHhhhHHHHHHHHHHHHHH
Confidence 9999996321 0011111211 1269999999642 11 346778999999988887766432
Q ss_pred c---C-CceEEEEecceeecCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCC
Q 010075 152 V---K-LKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGW 227 (519)
Q Consensus 152 ~---~-l~~~V~vSTa~v~~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~ 227 (519)
. + ..++|++||....... +.
T Consensus 137 ~~~~~~~~~iv~isS~~~~~~~--------------------------------------------------------~~ 160 (256)
T TIGR01500 137 KDSPGLNRTVVNISSLCAIQPF--------------------------------------------------------KG 160 (256)
T ss_pred hhcCCCCCEEEEECCHHhCCCC--------------------------------------------------------CC
Confidence 1 1 2579999997543211 12
Q ss_pred CcHHHHHHHHHHHHHHHh-----hcCCcEEEEecCccccC
Q 010075 228 PNTYVFTKTMGEMLMQQS-----KENLSLVIIRPTVVSGT 262 (519)
Q Consensus 228 ~n~Y~~sK~~aE~lv~~~-----~~~lp~~IvRPs~V~g~ 262 (519)
...|+.||+..+.+++.. ..++.+..+.||.|-.+
T Consensus 161 ~~~Y~asKaal~~l~~~la~e~~~~~i~v~~v~PG~v~T~ 200 (256)
T TIGR01500 161 WALYCAGKAARDMLFQVLALEEKNPNVRVLNYAPGVLDTD 200 (256)
T ss_pred chHHHHHHHHHHHHHHHHHHHhcCCCeEEEEecCCcccch
Confidence 246999999999888764 35689999999988654
|
This model describes sepiapterin reductase, a member of the short chain dehydrogenase/reductase family. The enzyme catalyzes the last step in the biosynthesis of tetrahydrobiopterin. A similar enzyme in Bacillus cereus was isolated for its ability to convert benzil to (S)-benzoin, a property sepiapterin reductase also shares. Cutoff scores for this model are set such that benzil reductase scores between trusted and noise cutoffs. |
| >KOG1208 consensus Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=99.20 E-value=2.2e-10 Score=115.53 Aligned_cols=188 Identities=23% Similarity=0.229 Sum_probs=124.7
Q ss_pred hcCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecC-CcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCce
Q 010075 9 FLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAA-DIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKI 87 (519)
Q Consensus 9 ~~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~-~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v 87 (519)
.+.|++++|||||+.||...+++|.++| .+|++..|+. ......++++ ++ ....++
T Consensus 32 ~~~~~~~vVTGansGIG~eta~~La~~G---a~Vv~~~R~~~~~~~~~~~i~-------------~~-------~~~~~i 88 (314)
T KOG1208|consen 32 DLSGKVALVTGATSGIGFETARELALRG---AHVVLACRNEERGEEAKEQIQ-------------KG-------KANQKI 88 (314)
T ss_pred cCCCcEEEEECCCCchHHHHHHHHHhCC---CEEEEEeCCHHHHHHHHHHHH-------------hc-------CCCCce
Confidence 3678999999999999999999999998 7899999986 3333333333 11 124788
Q ss_pred EEEeccCCCCCCCCChhhhHHHHhcCccEEEEcCccCCc-----cccHHHHHHHhHHHHHHHHHHH----HhccCCceEE
Q 010075 88 TFVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF-----DERYDVAFGINTLGVIHLVNFA----KKCVKLKVFV 158 (519)
Q Consensus 88 ~~v~gDl~~~~lgls~~~~~~~l~~~vdiViH~Aa~v~f-----~~~~~~~~~~Nv~gt~~ll~~a----~~~~~l~~~V 158 (519)
.++.+|+++......-.+.........|+.|++||.... .+.++..+.+|..|...|.++. +.. ...|+|
T Consensus 89 ~~~~lDLssl~SV~~fa~~~~~~~~~ldvLInNAGV~~~~~~~t~DG~E~~~~tN~lg~flLt~lLlp~lk~s-~~~RIV 167 (314)
T KOG1208|consen 89 RVIQLDLSSLKSVRKFAEEFKKKEGPLDVLINNAGVMAPPFSLTKDGLELTFATNYLGHFLLTELLLPLLKRS-APSRIV 167 (314)
T ss_pred EEEECCCCCHHHHHHHHHHHHhcCCCccEEEeCcccccCCcccCccchhheehhhhHHHHHHHHHHHHHHhhC-CCCCEE
Confidence 999999997543222222222233469999999998632 2568888999999977765554 443 227999
Q ss_pred EEecceeecCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcHHHHHHHHH
Q 010075 159 HVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMG 238 (519)
Q Consensus 159 ~vSTa~v~~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~Y~~sK~~a 238 (519)
++||... +... + + ..++. +. .........|+.||..-
T Consensus 168 ~vsS~~~-~~~~---~---~---~~l~~---------------------~~------------~~~~~~~~~Y~~SKla~ 204 (314)
T KOG1208|consen 168 NVSSILG-GGKI---D---L---KDLSG---------------------EK------------AKLYSSDAAYALSKLAN 204 (314)
T ss_pred EEcCccc-cCcc---c---h---hhccc---------------------hh------------ccCccchhHHHHhHHHH
Confidence 9999764 1100 0 0 00000 00 00012223699999877
Q ss_pred HHHHHHh----hcCCcEEEEecCccccCC
Q 010075 239 EMLMQQS----KENLSLVIIRPTVVSGTY 263 (519)
Q Consensus 239 E~lv~~~----~~~lp~~IvRPs~V~g~~ 263 (519)
.....+. ..++.+..+.||.|.++.
T Consensus 205 ~l~~~eL~k~l~~~V~~~~~hPG~v~t~~ 233 (314)
T KOG1208|consen 205 VLLANELAKRLKKGVTTYSVHPGVVKTTG 233 (314)
T ss_pred HHHHHHHHHHhhcCceEEEECCCcccccc
Confidence 6666654 447889999999998873
|
|
| >PRK08862 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.19 E-value=6.3e-10 Score=107.78 Aligned_cols=167 Identities=13% Similarity=0.104 Sum_probs=109.5
Q ss_pred cCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 010075 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (519)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (519)
++||+++||||++.||+.++++|++.| .+|++..|+... .+.+.++ +++. ..++..
T Consensus 3 ~~~k~~lVtGas~GIG~aia~~la~~G---~~V~~~~r~~~~---l~~~~~~---------i~~~---------~~~~~~ 58 (227)
T PRK08862 3 IKSSIILITSAGSVLGRTISCHFARLG---ATLILCDQDQSA---LKDTYEQ---------CSAL---------TDNVYS 58 (227)
T ss_pred CCCeEEEEECCccHHHHHHHHHHHHCC---CEEEEEcCCHHH---HHHHHHH---------HHhc---------CCCeEE
Confidence 468999999999999999999999998 577888886422 1222111 1110 245678
Q ss_pred EeccCCCCCCCCChhhhHHHH---hc-CccEEEEcCccCC----cc----ccHHHHHHHhHHHHHHHHHHHHh-c---cC
Q 010075 90 VPGDISSEDLGLKDSNLKEEL---WN-ELDIMVNSAAITK----FD----ERYDVAFGINTLGVIHLVNFAKK-C---VK 153 (519)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l---~~-~vdiViH~Aa~v~----f~----~~~~~~~~~Nv~gt~~ll~~a~~-~---~~ 153 (519)
+.+|+++++. -....+.+ .. ++|++||+||... +. +.+...+.+|+.++..+.+.+.. + ++
T Consensus 59 ~~~D~~~~~~---~~~~~~~~~~~~g~~iD~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~m~~~~~ 135 (227)
T PRK08862 59 FQLKDFSQES---IRHLFDAIEQQFNRAPDVLVNNWTSSPLPSLFDEQPSESFIQQLSSLASTLFTYGQVAAERMRKRNK 135 (227)
T ss_pred EEccCCCHHH---HHHHHHHHHHHhCCCCCEEEECCccCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCC
Confidence 8899986421 01111111 24 7999999997432 21 34555678888887777655432 2 12
Q ss_pred CceEEEEecceeecCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcHHHH
Q 010075 154 LKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVF 233 (519)
Q Consensus 154 l~~~V~vSTa~v~~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~Y~~ 233 (519)
-..+|++||.... .....|+.
T Consensus 136 ~g~Iv~isS~~~~-----------------------------------------------------------~~~~~Y~a 156 (227)
T PRK08862 136 KGVIVNVISHDDH-----------------------------------------------------------QDLTGVES 156 (227)
T ss_pred CceEEEEecCCCC-----------------------------------------------------------CCcchhHH
Confidence 3589999984211 01235999
Q ss_pred HHHHHHHHHHHh-----hcCCcEEEEecCccccC
Q 010075 234 TKTMGEMLMQQS-----KENLSLVIIRPTVVSGT 262 (519)
Q Consensus 234 sK~~aE~lv~~~-----~~~lp~~IvRPs~V~g~ 262 (519)
||+..+.+.+.. ..++.+..+.||.+-..
T Consensus 157 sKaal~~~~~~la~el~~~~Irvn~v~PG~i~t~ 190 (227)
T PRK08862 157 SNALVSGFTHSWAKELTPFNIRVGGVVPSIFSAN 190 (227)
T ss_pred HHHHHHHHHHHHHHHHhhcCcEEEEEecCcCcCC
Confidence 999988887654 45799999999987665
|
|
| >KOG4039 consensus Serine/threonine kinase TIP30/CC3 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.18 E-value=1.3e-10 Score=103.85 Aligned_cols=168 Identities=22% Similarity=0.221 Sum_probs=124.4
Q ss_pred cCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 010075 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (519)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (519)
++++++||.||||-.|..|++.++++ |...+||++.|.+....+ -.+.+..
T Consensus 16 mq~~s~fvlGAtG~~G~~llk~~~E~-~~FSKV~~i~RR~~~d~a----------------------------t~k~v~q 66 (238)
T KOG4039|consen 16 MQNMSGFVLGATGLCGGGLLKHAQEA-PQFSKVYAILRRELPDPA----------------------------TDKVVAQ 66 (238)
T ss_pred hhccceEEEeccccccHHHHHHHHhc-ccceeEEEEEeccCCCcc----------------------------ccceeee
Confidence 56799999999999999999999986 566899999998632211 1256667
Q ss_pred EeccCCCCCCCCChhhhHHHHhcCccEEEEcCccCCccccHHHHHHHhHHHHHHHHHHHHhccCCceEEEEecceeecCc
Q 010075 90 VPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKFDERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAYVAGER 169 (519)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~~~vdiViH~Aa~v~f~~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V~vSTa~v~~~~ 169 (519)
+..|.+. -++. ..-..++|+.|.|-|+++-....+..+++.-.-...+.++|++ ++++.|+.+||+......
T Consensus 67 ~~vDf~K------l~~~-a~~~qg~dV~FcaLgTTRgkaGadgfykvDhDyvl~~A~~AKe-~Gck~fvLvSS~GAd~sS 138 (238)
T KOG4039|consen 67 VEVDFSK------LSQL-ATNEQGPDVLFCALGTTRGKAGADGFYKVDHDYVLQLAQAAKE-KGCKTFVLVSSAGADPSS 138 (238)
T ss_pred EEechHH------HHHH-HhhhcCCceEEEeecccccccccCceEeechHHHHHHHHHHHh-CCCeEEEEEeccCCCccc
Confidence 7778774 2232 2556789999999999876655666677777777788889988 599999999998764322
Q ss_pred CCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcHHHHHHHHHHHHHHHhhcCC
Q 010075 170 TGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLMQQSKENL 249 (519)
Q Consensus 170 ~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~Y~~sK~~aE~lv~~~~~~l 249 (519)
.-.|-.+|-..|+-+.+... -
T Consensus 139 ----------------------------------------------------------rFlY~k~KGEvE~~v~eL~F-~ 159 (238)
T KOG4039|consen 139 ----------------------------------------------------------RFLYMKMKGEVERDVIELDF-K 159 (238)
T ss_pred ----------------------------------------------------------ceeeeeccchhhhhhhhccc-c
Confidence 12367778888887776522 2
Q ss_pred cEEEEecCccccCCCCCCC-ccccc
Q 010075 250 SLVIIRPTVVSGTYKEPFP-GWVED 273 (519)
Q Consensus 250 p~~IvRPs~V~g~~~~p~~-gw~~~ 273 (519)
.++|+|||.+.|...+..+ +|.-+
T Consensus 160 ~~~i~RPG~ll~~R~esr~geflg~ 184 (238)
T KOG4039|consen 160 HIIILRPGPLLGERTESRQGEFLGN 184 (238)
T ss_pred EEEEecCcceecccccccccchhhh
Confidence 4899999999998776544 45443
|
|
| >KOG0725 consensus Reductases with broad range of substrate specificities [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.14 E-value=1.2e-09 Score=108.36 Aligned_cols=178 Identities=21% Similarity=0.212 Sum_probs=121.9
Q ss_pred hcCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccH-HHHHHHHHhhhhhHHHHHhhhccccccccCCce
Q 010075 9 FLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSA-ALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKI 87 (519)
Q Consensus 9 ~~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~-~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v 87 (519)
-++||+++||||+..||++++++|.+.| .+|++..|+...... .+.+. . .. ....++
T Consensus 5 ~l~gkvalVTG~s~GIG~aia~~la~~G---a~v~i~~r~~~~~~~~~~~~~-------------~---~~---~~~~~~ 62 (270)
T KOG0725|consen 5 RLAGKVALVTGGSSGIGKAIALLLAKAG---AKVVITGRSEERLEETAQELG-------------G---LG---YTGGKV 62 (270)
T ss_pred cCCCcEEEEECCCChHHHHHHHHHHHCC---CEEEEEeCCHHHHHHHHHHHH-------------h---cC---CCCCee
Confidence 3689999999999999999999999999 788998887543211 11111 0 00 013678
Q ss_pred EEEeccCCCCCCCCChhhhHHHH-hcCccEEEEcCccCCc--------cccHHHHHHHhHHH-HHHHHHHHHhc---cCC
Q 010075 88 TFVPGDISSEDLGLKDSNLKEEL-WNELDIMVNSAAITKF--------DERYDVAFGINTLG-VIHLVNFAKKC---VKL 154 (519)
Q Consensus 88 ~~v~gDl~~~~lgls~~~~~~~l-~~~vdiViH~Aa~v~f--------~~~~~~~~~~Nv~g-t~~ll~~a~~~---~~l 154 (519)
..+.+|++++.--....+...+. ..++|+++++||.... .+.++..+++|+.| +..+...|..+ .+-
T Consensus 63 ~~~~~Dv~~~~~~~~l~~~~~~~~~GkidiLvnnag~~~~~~~~~~~s~e~~d~~~~~Nl~G~~~~~~~~a~~~~~~~~g 142 (270)
T KOG0725|consen 63 LAIVCDVSKEVDVEKLVEFAVEKFFGKIDILVNNAGALGLTGSILDLSEEVFDKIMATNLRGSAFCLKQAARPMLKKSKG 142 (270)
T ss_pred EEEECcCCCHHHHHHHHHHHHHHhCCCCCEEEEcCCcCCCCCChhhCCHHHHHHHHhhhchhHHHHHHHHHHHHHHhcCC
Confidence 99999999532100001111112 3569999999998653 25688889999995 66666666544 234
Q ss_pred ceEEEEecceeecCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcHHHHH
Q 010075 155 KVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFT 234 (519)
Q Consensus 155 ~~~V~vSTa~v~~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~Y~~s 234 (519)
..++++||........ ..+..|+.|
T Consensus 143 g~I~~~ss~~~~~~~~-------------------------------------------------------~~~~~Y~~s 167 (270)
T KOG0725|consen 143 GSIVNISSVAGVGPGP-------------------------------------------------------GSGVAYGVS 167 (270)
T ss_pred ceEEEEeccccccCCC-------------------------------------------------------CCcccchhH
Confidence 5788888875443210 122679999
Q ss_pred HHHHHHHHHHh-----hcCCcEEEEecCccccCC
Q 010075 235 KTMGEMLMQQS-----KENLSLVIIRPTVVSGTY 263 (519)
Q Consensus 235 K~~aE~lv~~~-----~~~lp~~IvRPs~V~g~~ 263 (519)
|+..+++.+.. ..++++..+=||.|..+.
T Consensus 168 K~al~~ltr~lA~El~~~gIRvN~v~PG~i~T~~ 201 (270)
T KOG0725|consen 168 KAALLQLTRSLAKELAKHGIRVNSVSPGLVKTSL 201 (270)
T ss_pred HHHHHHHHHHHHHHHhhcCcEEEEeecCcEeCCc
Confidence 99999998854 568999999999998875
|
|
| >KOG1207 consensus Diacetyl reductase/L-xylulose reductase [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=99.11 E-value=8.4e-11 Score=104.87 Aligned_cols=206 Identities=20% Similarity=0.254 Sum_probs=140.4
Q ss_pred hhhcCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCc
Q 010075 7 VEFLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEK 86 (519)
Q Consensus 7 ~~~~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~ 86 (519)
..+++|+.|++||+.-.||+.++..|...| .+|++..|..... . .|-++- ...
T Consensus 2 ~t~laG~~vlvTgagaGIG~~~v~~La~aG---A~ViAvaR~~a~L------~----------sLV~e~--------p~~ 54 (245)
T KOG1207|consen 2 KTSLAGVIVLVTGAGAGIGKEIVLSLAKAG---AQVIAVARNEANL------L----------SLVKET--------PSL 54 (245)
T ss_pred cccccceEEEeecccccccHHHHHHHHhcC---CEEEEEecCHHHH------H----------HHHhhC--------Ccc
Confidence 457899999999999999999999999999 7889999975322 1 111222 245
Q ss_pred eEEEeccCCCCCCCCChhhhHHHHhc---CccEEEEcCccCC---c----cccHHHHHHHhHHHHHHHHHHHHhc----c
Q 010075 87 ITFVPGDISSEDLGLKDSNLKEELWN---ELDIMVNSAAITK---F----DERYDVAFGINTLGVIHLVNFAKKC----V 152 (519)
Q Consensus 87 v~~v~gDl~~~~lgls~~~~~~~l~~---~vdiViH~Aa~v~---f----~~~~~~~~~~Nv~gt~~ll~~a~~~----~ 152 (519)
|+++.+|++ +.+...+++. -+|..+|+||..- | .++++..+++|+.+..++.++..+. .
T Consensus 55 I~Pi~~Dls-------~wea~~~~l~~v~pidgLVNNAgvA~~~pf~eiT~q~fDr~F~VNvravi~v~Q~var~lv~R~ 127 (245)
T KOG1207|consen 55 IIPIVGDLS-------AWEALFKLLVPVFPIDGLVNNAGVATNHPFGEITQQSFDRTFAVNVRAVILVAQLVARNLVDRQ 127 (245)
T ss_pred eeeeEeccc-------HHHHHHHhhcccCchhhhhccchhhhcchHHHHhHHhhcceeeeeeeeeeeHHHHHHHhhhhcc
Confidence 899999999 4444445544 3799999999752 3 2566777889999998888875431 1
Q ss_pred CCceEEEEecceeecCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcHHH
Q 010075 153 KLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYV 232 (519)
Q Consensus 153 ~l~~~V~vSTa~v~~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~Y~ 232 (519)
....+|.+||....-.- +-...|.
T Consensus 128 ~~GaIVNvSSqas~R~~--------------------------------------------------------~nHtvYc 151 (245)
T KOG1207|consen 128 IKGAIVNVSSQASIRPL--------------------------------------------------------DNHTVYC 151 (245)
T ss_pred CCceEEEecchhccccc--------------------------------------------------------CCceEEe
Confidence 23469999997543211 2245689
Q ss_pred HHHHHHHHHHHHh-----hcCCcEEEEecCccccCCCCCCCcccccccccHHHHHHhhcCCceeeccCCCceeeeeeHHH
Q 010075 233 FTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDM 307 (519)
Q Consensus 233 ~sK~~aE~lv~~~-----~~~lp~~IvRPs~V~g~~~~p~~gw~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~d~vpVDd 307 (519)
.||++-+.+.+.. ..++++.-+.|..|...... ..|.|-... ..++ -.+ ..--|.-||.
T Consensus 152 atKaALDmlTk~lAlELGp~kIRVNsVNPTVVmT~MG~--dnWSDP~K~-k~mL--------~ri-----Pl~rFaEV~e 215 (245)
T KOG1207|consen 152 ATKAALDMLTKCLALELGPQKIRVNSVNPTVVMTDMGR--DNWSDPDKK-KKML--------DRI-----PLKRFAEVDE 215 (245)
T ss_pred ecHHHHHHHHHHHHHhhCcceeEeeccCCeEEEecccc--cccCCchhc-cchh--------hhC-----chhhhhHHHH
Confidence 9999888776644 34689999999999876432 345543110 0011 111 1223677999
Q ss_pred HHHHHHHHHHH
Q 010075 308 VVNAMIVAMVA 318 (519)
Q Consensus 308 va~aii~a~~~ 318 (519)
|++|++.++..
T Consensus 216 VVnA~lfLLSd 226 (245)
T KOG1207|consen 216 VVNAVLFLLSD 226 (245)
T ss_pred HHhhheeeeec
Confidence 99999888764
|
|
| >PLN00015 protochlorophyllide reductase | Back alignment and domain information |
|---|
Probab=99.11 E-value=1e-09 Score=111.33 Aligned_cols=125 Identities=16% Similarity=0.161 Sum_probs=81.0
Q ss_pred EEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEEeccCC
Q 010075 16 LVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVPGDIS 95 (519)
Q Consensus 16 lITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v~gDl~ 95 (519)
+|||||+.||.++++.|++.|. .+|++..|+... .+.+.+++ .. ...++.++.+|++
T Consensus 1 lITGas~GIG~aia~~l~~~G~--~~V~~~~r~~~~---~~~~~~~l---------~~---------~~~~~~~~~~Dl~ 57 (308)
T PLN00015 1 IITGASSGLGLATAKALAETGK--WHVVMACRDFLK---AERAAKSA---------GM---------PKDSYTVMHLDLA 57 (308)
T ss_pred CEeCCCChHHHHHHHHHHHCCC--CEEEEEeCCHHH---HHHHHHHh---------cC---------CCCeEEEEEecCC
Confidence 5999999999999999999873 467888776421 11111111 00 0246788999999
Q ss_pred CCCCCCChhhhHHHH---hcCccEEEEcCccCC----c----cccHHHHHHHhHHHHHHHHHHHHh-c--cC--CceEEE
Q 010075 96 SEDLGLKDSNLKEEL---WNELDIMVNSAAITK----F----DERYDVAFGINTLGVIHLVNFAKK-C--VK--LKVFVH 159 (519)
Q Consensus 96 ~~~lgls~~~~~~~l---~~~vdiViH~Aa~v~----f----~~~~~~~~~~Nv~gt~~ll~~a~~-~--~~--l~~~V~ 159 (519)
+++- -....+.+ ...+|++||+||... + .+.++..+++|+.|+..+.+.+.+ + .+ ..++|+
T Consensus 58 d~~~---v~~~~~~~~~~~~~iD~lInnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~~g~IV~ 134 (308)
T PLN00015 58 SLDS---VRQFVDNFRRSGRPLDVLVCNAAVYLPTAKEPTFTADGFELSVGTNHLGHFLLSRLLLDDLKKSDYPSKRLII 134 (308)
T ss_pred CHHH---HHHHHHHHHhcCCCCCEEEECCCcCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCCCEEEE
Confidence 6321 01111122 135899999999742 1 145778899999998887666543 2 12 368999
Q ss_pred Eecceee
Q 010075 160 VSTAYVA 166 (519)
Q Consensus 160 vSTa~v~ 166 (519)
+||...+
T Consensus 135 vsS~~~~ 141 (308)
T PLN00015 135 VGSITGN 141 (308)
T ss_pred Eeccccc
Confidence 9997653
|
|
| >COG1028 FabG Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only] | Back alignment and domain information |
|---|
Probab=99.09 E-value=2.7e-09 Score=104.44 Aligned_cols=172 Identities=21% Similarity=0.268 Sum_probs=112.9
Q ss_pred cCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccC-CceE
Q 010075 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFIS-EKIT 88 (519)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~-~~v~ 88 (519)
+.+|+||||||++.||+.++++|++.| .+|+++.|..... ..+.+.+. .. .. . ..+.
T Consensus 3 ~~~~~ilITGas~GiG~aia~~l~~~G---~~v~~~~~~~~~~-~~~~~~~~---------~~-~~--------~~~~~~ 60 (251)
T COG1028 3 LSGKVALVTGASSGIGRAIARALAREG---ARVVVAARRSEEE-AAEALAAA---------IK-EA--------GGGRAA 60 (251)
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCC---CeEEEEcCCCchh-hHHHHHHH---------HH-hc--------CCCcEE
Confidence 468999999999999999999999888 6777777765432 11111100 00 00 0 3577
Q ss_pred EEeccCCC-CCCCCChhhhHHHHhcCccEEEEcCccCC----c----cccHHHHHHHhHHHHHHHHHHHHhccCCceEEE
Q 010075 89 FVPGDISS-EDLGLKDSNLKEELWNELDIMVNSAAITK----F----DERYDVAFGINTLGVIHLVNFAKKCVKLKVFVH 159 (519)
Q Consensus 89 ~v~gDl~~-~~lgls~~~~~~~l~~~vdiViH~Aa~v~----f----~~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V~ 159 (519)
+...|+++ +.......+.......++|++||+|+... + .+.++..+.+|+.|...+.+.+...-..+++|+
T Consensus 61 ~~~~Dvs~~~~~v~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~Iv~ 140 (251)
T COG1028 61 AVAADVSDDEESVEALVAAAEEEFGRIDILVNNAGIAGPDAPLEELTEEDWDRVIDVNLLGAFLLTRAALPLMKKQRIVN 140 (251)
T ss_pred EEEecCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHhHHHHHHHHHHHHHhhhhCeEEE
Confidence 88899995 21100011111112345999999999753 2 256788899999999998885543211128999
Q ss_pred EecceeecCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCC-CcHHHHHHHHH
Q 010075 160 VSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGW-PNTYVFTKTMG 238 (519)
Q Consensus 160 vSTa~v~~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~-~n~Y~~sK~~a 238 (519)
+||.... ... + ...|+.||+..
T Consensus 141 isS~~~~-~~~--------------------------------------------------------~~~~~Y~~sK~al 163 (251)
T COG1028 141 ISSVAGL-GGP--------------------------------------------------------PGQAAYAASKAAL 163 (251)
T ss_pred ECCchhc-CCC--------------------------------------------------------CCcchHHHHHHHH
Confidence 9987544 211 1 25699999998
Q ss_pred HHHHHHh-----hcCCcEEEEecCccc
Q 010075 239 EMLMQQS-----KENLSLVIIRPTVVS 260 (519)
Q Consensus 239 E~lv~~~-----~~~lp~~IvRPs~V~ 260 (519)
+.+.... ..++.+..+-||.+-
T Consensus 164 ~~~~~~l~~e~~~~gi~v~~v~PG~~~ 190 (251)
T COG1028 164 IGLTKALALELAPRGIRVNAVAPGYID 190 (251)
T ss_pred HHHHHHHHHHHhhhCcEEEEEEeccCC
Confidence 8877654 357899999999554
|
|
| >PLN02730 enoyl-[acyl-carrier-protein] reductase | Back alignment and domain information |
|---|
Probab=99.05 E-value=5.3e-09 Score=105.52 Aligned_cols=241 Identities=12% Similarity=0.079 Sum_probs=136.7
Q ss_pred cCCCEEEEeCC--ccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCce
Q 010075 10 LENKTILVSGV--TGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKI 87 (519)
Q Consensus 10 ~~~k~VlITGa--TGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v 87 (519)
++||+++|||| +..||.++++.|.+.| .+|++ .|.... .+++..++.+ .-++.++.... ....+..
T Consensus 7 l~gk~alITGa~~s~GIG~a~A~~la~~G---a~Vv~-~~~~~~---l~~~~~~~~~-~~~~~~~~~~~----~~~~~~~ 74 (303)
T PLN02730 7 LRGKRAFIAGVADDNGYGWAIAKALAAAG---AEILV-GTWVPA---LNIFETSLRR-GKFDESRKLPD----GSLMEIT 74 (303)
T ss_pred CCCCEEEEeCCCCCCcHHHHHHHHHHHCC---CEEEE-EeCcch---hhHHHHhhhc-cccchhhhccc----ccccCcC
Confidence 78999999999 7999999999999999 66766 664322 2222211111 00111111000 0001224
Q ss_pred EEEeccC--CCCC-CCC----------C----hhhhHHHH---hcCccEEEEcCccC-----Cc----cccHHHHHHHhH
Q 010075 88 TFVPGDI--SSED-LGL----------K----DSNLKEEL---WNELDIMVNSAAIT-----KF----DERYDVAFGINT 138 (519)
Q Consensus 88 ~~v~gDl--~~~~-lgl----------s----~~~~~~~l---~~~vdiViH~Aa~v-----~f----~~~~~~~~~~Nv 138 (519)
..+.+|+ +++. +-- + -....+.+ ..++|++||+||.. .+ .+.++..+++|+
T Consensus 75 ~~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~i~~~~G~iDiLVnNAG~~~~~~~~~~~~~~e~~~~~~~vN~ 154 (303)
T PLN02730 75 KVYPLDAVFDTPEDVPEDVKTNKRYAGSSNWTVQEVAESVKADFGSIDILVHSLANGPEVTKPLLETSRKGYLAAISASS 154 (303)
T ss_pred eeeecceecCccccCchhhhcccccccCCHHHHHHHHHHHHHHcCCCCEEEECCCccccCCCChhhCCHHHHHHHHHHHh
Confidence 5788888 4322 000 0 01122122 24599999999642 12 256788899999
Q ss_pred HHHHHHHHHHHh-ccCCceEEEEecceeecCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhc
Q 010075 139 LGVIHLVNFAKK-CVKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNL 217 (519)
Q Consensus 139 ~gt~~ll~~a~~-~~~l~~~V~vSTa~v~~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 217 (519)
.|+..+.+.+.. +..-.++|++||........
T Consensus 155 ~~~~~l~~~~~p~m~~~G~II~isS~a~~~~~p----------------------------------------------- 187 (303)
T PLN02730 155 YSFVSLLQHFGPIMNPGGASISLTYIASERIIP----------------------------------------------- 187 (303)
T ss_pred HHHHHHHHHHHHHHhcCCEEEEEechhhcCCCC-----------------------------------------------
Confidence 999998887654 22226899999864321100
Q ss_pred cccccccCCCCcHHHHHHHHHHHHHHHh----h--cCCcEEEEecCccccCCCCCCCcccccccccHHHHHHhhcCCcee
Q 010075 218 GTERAKLHGWPNTYVFTKTMGEMLMQQS----K--ENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRC 291 (519)
Q Consensus 218 g~~~~~~~~~~n~Y~~sK~~aE~lv~~~----~--~~lp~~IvRPs~V~g~~~~p~~gw~~~~~~~~~~i~~~~~g~~~~ 291 (519)
.....|+.||+..+.+.+.. . .++.+..+-||.|-.+.....+. ...........
T Consensus 188 --------~~~~~Y~asKaAl~~l~~~la~El~~~~gIrVn~V~PG~v~T~~~~~~~~-------~~~~~~~~~~~---- 248 (303)
T PLN02730 188 --------GYGGGMSSAKAALESDTRVLAFEAGRKYKIRVNTISAGPLGSRAAKAIGF-------IDDMIEYSYAN---- 248 (303)
T ss_pred --------CCchhhHHHHHHHHHHHHHHHHHhCcCCCeEEEEEeeCCccCchhhcccc-------cHHHHHHHHhc----
Confidence 11136999999999888754 2 47999999999886654321110 01111111110
Q ss_pred eccCCCceeeeeeHHHHHHHHHHHHHHhccCCCCCcEEEecCC
Q 010075 292 LVGETKVIMDVIPVDMVVNAMIVAMVAHAKQPSDANIYHVGSS 334 (519)
Q Consensus 292 ~~~~~~~~~d~vpVDdva~aii~a~~~~~~~~~~~~iyni~s~ 334 (519)
.+ ...+...++++++++.++..... .-.+.++.+.++
T Consensus 249 ~p-----l~r~~~peevA~~~~fLaS~~a~-~itG~~l~vdGG 285 (303)
T PLN02730 249 AP-----LQKELTADEVGNAAAFLASPLAS-AITGATIYVDNG 285 (303)
T ss_pred CC-----CCCCcCHHHHHHHHHHHhCcccc-CccCCEEEECCC
Confidence 01 01234578999999998853222 113566766555
|
|
| >KOG4288 consensus Predicted oxidoreductase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.03 E-value=1e-09 Score=102.25 Aligned_cols=207 Identities=17% Similarity=0.112 Sum_probs=141.2
Q ss_pred EEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEEecc
Q 010075 14 TILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVPGD 93 (519)
Q Consensus 14 ~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v~gD 93 (519)
.+++.|+.||.|.++++.-+..+ ..|-.|.|+...+ .+ ++ -...+.++.||
T Consensus 54 ~tlvlggnpfsgs~vlk~A~~vv---~svgilsen~~k~-~l--------~s-----------------w~~~vswh~gn 104 (283)
T KOG4288|consen 54 WTLVLGGNPFSGSEVLKNATNVV---HSVGILSENENKQ-TL--------SS-----------------WPTYVSWHRGN 104 (283)
T ss_pred HHhhhcCCCcchHHHHHHHHhhc---eeeeEeecccCcc-hh--------hC-----------------CCcccchhhcc
Confidence 57888999999999999988876 6778889986532 11 11 13678889999
Q ss_pred CCCCCCCCChhhhHHHHhcCccEEEEcCccCCccccHHHHHHHhHHHHHHHHHHHHhccCCceEEEEecceeecCcCCee
Q 010075 94 ISSEDLGLKDSNLKEELWNELDIMVNSAAITKFDERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAYVAGERTGLI 173 (519)
Q Consensus 94 l~~~~lgls~~~~~~~l~~~vdiViH~Aa~v~f~~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V~vSTa~v~~~~~~~i 173 (519)
.... +........+..++-+++-. .+...+.++|=....+-.++|++. ++++|+|+|......
T Consensus 105 sfss-------n~~k~~l~g~t~v~e~~ggf---gn~~~m~~ing~ani~a~kaa~~~-gv~~fvyISa~d~~~------ 167 (283)
T KOG4288|consen 105 SFSS-------NPNKLKLSGPTFVYEMMGGF---GNIILMDRINGTANINAVKAAAKA-GVPRFVYISAHDFGL------ 167 (283)
T ss_pred cccc-------CcchhhhcCCcccHHHhcCc---cchHHHHHhccHhhHHHHHHHHHc-CCceEEEEEhhhcCC------
Confidence 8732 22224456788888777653 234556777877777888888885 999999999763211
Q ss_pred ecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcHHHHHHHHHHHHHHHhhcCCcEEE
Q 010075 174 LENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLMQQSKENLSLVI 253 (519)
Q Consensus 174 ~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~Y~~sK~~aE~lv~~~~~~lp~~I 253 (519)
++ --+.+|-.+|..||.-+... ..+.-+|
T Consensus 168 --------~~------------------------------------------~i~rGY~~gKR~AE~Ell~~-~~~rgii 196 (283)
T KOG4288|consen 168 --------PP------------------------------------------LIPRGYIEGKREAEAELLKK-FRFRGII 196 (283)
T ss_pred --------CC------------------------------------------ccchhhhccchHHHHHHHHh-cCCCcee
Confidence 11 12347999999999888765 3477899
Q ss_pred EecCccccCCCCCCCcccccccccHHHHHHhhcC---CceeeccCCCceeeeeeHHHHHHHHHHHHHHh
Q 010075 254 IRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQG---NLRCLVGETKVIMDVIPVDMVVNAMIVAMVAH 319 (519)
Q Consensus 254 vRPs~V~g~~~~p~~gw~~~~~~~~~~i~~~~~g---~~~~~~~~~~~~~d~vpVDdva~aii~a~~~~ 319 (519)
+|||.+||.. ++.|----+......+....++ .+..++.-+......|+|++||.+.+.++.++
T Consensus 197 lRPGFiyg~R--~v~g~~~pL~~vg~pl~~~~~~a~k~~~kLp~lg~l~~ppvnve~VA~aal~ai~dp 263 (283)
T KOG4288|consen 197 LRPGFIYGTR--NVGGIKSPLHTVGEPLEMVLKFALKPLNKLPLLGPLLAPPVNVESVALAALKAIEDP 263 (283)
T ss_pred eccceeeccc--ccCcccccHHhhhhhHHHHHHhhhchhhcCcccccccCCCcCHHHHHHHHHHhccCC
Confidence 9999999983 3333222222222222222222 23445556677888999999999999998643
|
|
| >KOG1203 consensus Predicted dehydrogenase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.02 E-value=6.3e-09 Score=106.88 Aligned_cols=231 Identities=18% Similarity=0.148 Sum_probs=136.6
Q ss_pred hcCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceE
Q 010075 9 FLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKIT 88 (519)
Q Consensus 9 ~~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~ 88 (519)
..+..+|||+||||.+|+.+++.|++.| ..|.+++|......-..+. ........
T Consensus 76 ~~~~~~VlVvGatG~vG~~iv~~llkrg---f~vra~VRd~~~a~~~~~~----------------------~~~d~~~~ 130 (411)
T KOG1203|consen 76 SKKPTTVLVVGATGKVGRRIVKILLKRG---FSVRALVRDEQKAEDLLGV----------------------FFVDLGLQ 130 (411)
T ss_pred CCCCCeEEEecCCCchhHHHHHHHHHCC---CeeeeeccChhhhhhhhcc----------------------cccccccc
Confidence 3456789999999999999999999999 6779999987543211110 00113445
Q ss_pred EEeccCCCCCCCCChhhhHHHHhcC----ccEEEEcCccCCccccHHHHHHHhHHHHHHHHHHHHhccCCceEEEEecce
Q 010075 89 FVPGDISSEDLGLKDSNLKEELWNE----LDIMVNSAAITKFDERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAY 164 (519)
Q Consensus 89 ~v~gDl~~~~lgls~~~~~~~l~~~----vdiViH~Aa~v~f~~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V~vSTa~ 164 (519)
.+..|... ..+....+.+. ..+++-|++...-.++...-..+...|+++++++|+.+ ++++||++|+..
T Consensus 131 ~v~~~~~~------~~d~~~~~~~~~~~~~~~v~~~~ggrp~~ed~~~p~~VD~~g~knlvdA~~~a-Gvk~~vlv~si~ 203 (411)
T KOG1203|consen 131 NVEADVVT------AIDILKKLVEAVPKGVVIVIKGAGGRPEEEDIVTPEKVDYEGTKNLVDACKKA-GVKRVVLVGSIG 203 (411)
T ss_pred eeeecccc------ccchhhhhhhhccccceeEEecccCCCCcccCCCcceecHHHHHHHHHHHHHh-CCceEEEEEeec
Confidence 56666554 33333344443 34666666554322222233457788999999999987 999999998775
Q ss_pred eecCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcHHHHHHHHHHHHHHH
Q 010075 165 VAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLMQQ 244 (519)
Q Consensus 165 v~~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~Y~~sK~~aE~lv~~ 244 (519)
..-... +... . ...-.+-.+|..+|+.+++
T Consensus 204 ~~~~~~------------~~~~------~--------------------------------~~~~~~~~~k~~~e~~~~~ 233 (411)
T KOG1203|consen 204 GTKFNQ------------PPNI------L--------------------------------LLNGLVLKAKLKAEKFLQD 233 (411)
T ss_pred CcccCC------------Cchh------h--------------------------------hhhhhhhHHHHhHHHHHHh
Confidence 432110 0000 0 0011244788899999886
Q ss_pred hhcCCcEEEEecCccccCCCCCCCcccccccccHHHHHHhhcCCceeeccCCCceeeeeeHHHHHHHHHHHHHHhccCCC
Q 010075 245 SKENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMIVAMVAHAKQPS 324 (519)
Q Consensus 245 ~~~~lp~~IvRPs~V~g~~~~p~~gw~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~d~vpVDdva~aii~a~~~~~~~~~ 324 (519)
.+++.+|+||+.-.-... |..... .........+++ ..-.|+-.++|...+.++.......
T Consensus 234 --Sgl~ytiIR~g~~~~~~~----~~~~~~----------~~~~~~~~~~~~--~~~~i~r~~vael~~~all~~~~~~- 294 (411)
T KOG1203|consen 234 --SGLPYTIIRPGGLEQDTG----GQREVV----------VDDEKELLTVDG--GAYSISRLDVAELVAKALLNEAATF- 294 (411)
T ss_pred --cCCCcEEEeccccccCCC----Ccceec----------ccCccccccccc--cceeeehhhHHHHHHHHHhhhhhcc-
Confidence 799999999986543221 110000 000000111111 1136888899999999887654432
Q ss_pred CCcEEEecCCCCCchhH
Q 010075 325 DANIYHVGSSLRNPVTL 341 (519)
Q Consensus 325 ~~~iyni~s~~~~~i~~ 341 (519)
-.+..+++...-|-++
T Consensus 295 -~k~~~~v~~~~gpg~~ 310 (411)
T KOG1203|consen 295 -KKVVELVLKPEGPGRP 310 (411)
T ss_pred -ceeEEeecCCCCCCcc
Confidence 2455555555555554
|
|
| >PF08659 KR: KR domain; InterPro: IPR013968 This domain is found in bacterial polyketide synthases that catalyse the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain | Back alignment and domain information |
|---|
Probab=99.02 E-value=1.4e-08 Score=94.92 Aligned_cols=158 Identities=16% Similarity=0.242 Sum_probs=105.0
Q ss_pred EEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecC-CcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEEec
Q 010075 14 TILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAA-DIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVPG 92 (519)
Q Consensus 14 ~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~-~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v~g 92 (519)
+++||||+|.||..+++.|.+.+. .+|+++.|+. ......+.+ +.+++. ..++.++.+
T Consensus 2 tylitGG~gglg~~la~~La~~~~--~~~il~~r~~~~~~~~~~~i----------~~l~~~---------g~~v~~~~~ 60 (181)
T PF08659_consen 2 TYLITGGLGGLGQSLARWLAERGA--RRLILLGRSGAPSAEAEAAI----------RELESA---------GARVEYVQC 60 (181)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTT---SEEEEEESSGGGSTTHHHHH----------HHHHHT---------T-EEEEEE-
T ss_pred EEEEECCccHHHHHHHHHHHHcCC--CEEEEeccCCCccHHHHHHH----------HHHHhC---------CCceeeecc
Confidence 689999999999999999999873 7899999993 222222222 122221 368999999
Q ss_pred cCCCCCCCCChhhhHHHHh-------cCccEEEEcCccCCc-------cccHHHHHHHhHHHHHHHHHHHHhccCCceEE
Q 010075 93 DISSEDLGLKDSNLKEELW-------NELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKCVKLKVFV 158 (519)
Q Consensus 93 Dl~~~~lgls~~~~~~~l~-------~~vdiViH~Aa~v~f-------~~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V 158 (519)
|++++ +....++ ..++.|||+|+.... .+.++..+..-+.|+.+|.++... ..++.||
T Consensus 61 Dv~d~-------~~v~~~~~~~~~~~~~i~gVih~ag~~~~~~~~~~t~~~~~~~~~~Kv~g~~~L~~~~~~-~~l~~~i 132 (181)
T PF08659_consen 61 DVTDP-------EAVAAALAQLRQRFGPIDGVIHAAGVLADAPIQDQTPDEFDAVLAPKVRGLWNLHEALEN-RPLDFFI 132 (181)
T ss_dssp -TTSH-------HHHHHHHHTSHTTSS-EEEEEE-------B-GCC--HHHHHHHHHHHHHHHHHHHHHHTT-TTTSEEE
T ss_pred CccCH-------HHHHHHHHHHHhccCCcceeeeeeeeecccccccCCHHHHHHHHhhhhhHHHHHHHHhhc-CCCCeEE
Confidence 99963 3333443 257899999998642 245677788899999999999988 4889999
Q ss_pred EEeccee-ecCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcHHHHHHHH
Q 010075 159 HVSTAYV-AGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTM 237 (519)
Q Consensus 159 ~vSTa~v-~~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~Y~~sK~~ 237 (519)
.+||... .|... ...|+..-..
T Consensus 133 ~~SSis~~~G~~g---------------------------------------------------------q~~YaaAN~~ 155 (181)
T PF08659_consen 133 LFSSISSLLGGPG---------------------------------------------------------QSAYAAANAF 155 (181)
T ss_dssp EEEEHHHHTT-TT---------------------------------------------------------BHHHHHHHHH
T ss_pred EECChhHhccCcc---------------------------------------------------------hHhHHHHHHH
Confidence 9999754 33221 2458888888
Q ss_pred HHHHHHHh-hcCCcEEEEecC
Q 010075 238 GEMLMQQS-KENLSLVIIRPT 257 (519)
Q Consensus 238 aE~lv~~~-~~~lp~~IvRPs 257 (519)
.+.+.... ..+.|+..+.-+
T Consensus 156 lda~a~~~~~~g~~~~sI~wg 176 (181)
T PF08659_consen 156 LDALARQRRSRGLPAVSINWG 176 (181)
T ss_dssp HHHHHHHHHHTTSEEEEEEE-
T ss_pred HHHHHHHHHhCCCCEEEEEcc
Confidence 88887765 567888777644
|
It uses NADPH to reduce the keto group to a hydroxy group. ; PDB: 3QP9_D 2FR0_A 2FR1_A 2Z5L_A 3SLK_B 3MJE_B 3MJC_A 3MJT_B 3MJV_A 3MJS_B .... |
| >KOG1200 consensus Mitochondrial/plastidial beta-ketoacyl-ACP reductase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.02 E-value=1.3e-08 Score=92.83 Aligned_cols=234 Identities=17% Similarity=0.160 Sum_probs=145.0
Q ss_pred chhhhcCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccC
Q 010075 5 SVVEFLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFIS 84 (519)
Q Consensus 5 ~i~~~~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~ 84 (519)
...+-...+..+||||+..||+++...|.+.| .+|.+..+.........+ .+ |. .
T Consensus 7 ~~~~r~~sk~~~vtGg~sGIGrAia~~la~~G---arv~v~dl~~~~A~ata~---~L-------------~g------~ 61 (256)
T KOG1200|consen 7 EVVQRLMSKVAAVTGGSSGIGRAIAQLLAKKG---ARVAVADLDSAAAEATAG---DL-------------GG------Y 61 (256)
T ss_pred HHHHHHhcceeEEecCCchHHHHHHHHHHhcC---cEEEEeecchhhHHHHHh---hc-------------CC------C
Confidence 34556677899999999999999999999999 567776666543322211 11 10 1
Q ss_pred CceEEEeccCCCCCCCCChhhhHHHHhcCccEEEEcCccCCc-------cccHHHHHHHhHHHHHHHHHHHHhc---cC-
Q 010075 85 EKITFVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKC---VK- 153 (519)
Q Consensus 85 ~~v~~v~gDl~~~~lgls~~~~~~~l~~~vdiViH~Aa~v~f-------~~~~~~~~~~Nv~gt~~ll~~a~~~---~~- 153 (519)
..-..+.+|++++...-.-.+....-+..++++++||+.++- .++|+..+.+|+.|+..+.+++.+. .+
T Consensus 62 ~~h~aF~~DVS~a~~v~~~l~e~~k~~g~psvlVncAGItrD~~Llrmkq~qwd~vi~vNL~gvfl~tqaa~r~~~~~~~ 141 (256)
T KOG1200|consen 62 GDHSAFSCDVSKAHDVQNTLEEMEKSLGTPSVLVNCAGITRDGLLLRMKQEQWDSVIAVNLTGVFLVTQAAVRAMVMNQQ 141 (256)
T ss_pred CccceeeeccCcHHHHHHHHHHHHHhcCCCcEEEEcCccccccceeeccHHHHHHHHHhhchhhHHHHHHHHHHHHHhcC
Confidence 234577999997431110000011223469999999999753 3789999999999999998887653 22
Q ss_pred -CceEEEEeccee-ecCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcHH
Q 010075 154 -LKVFVHVSTAYV-AGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTY 231 (519)
Q Consensus 154 -l~~~V~vSTa~v-~~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~Y 231 (519)
.-++|.+||.-- -|+. -...|.. .-...-
T Consensus 142 ~~~sIiNvsSIVGkiGN~----GQtnYAA---------------------------------------------sK~GvI 172 (256)
T KOG1200|consen 142 QGLSIINVSSIVGKIGNF----GQTNYAA---------------------------------------------SKGGVI 172 (256)
T ss_pred CCceEEeehhhhcccccc----cchhhhh---------------------------------------------hcCcee
Confidence 238999999632 2221 1111110 111234
Q ss_pred HHHHHHHHHHHHHhhcCCcEEEEecCccccCCCCCCCcccccccccHHHHHHhhcCCceeeccCCCceeeeeeHHHHHHH
Q 010075 232 VFTKTMGEMLMQQSKENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNA 311 (519)
Q Consensus 232 ~~sK~~aE~lv~~~~~~lp~~IvRPs~V~g~~~~p~~gw~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~d~vpVDdva~a 311 (519)
++||.+|..+.+ .++++..+-||.|-.|..+.+ +..++..+....+..-+|+ .+++|+.
T Consensus 173 gftktaArEla~---knIrvN~VlPGFI~tpMT~~m---------p~~v~~ki~~~iPmgr~G~---------~EevA~~ 231 (256)
T KOG1200|consen 173 GFTKTAARELAR---KNIRVNVVLPGFIATPMTEAM---------PPKVLDKILGMIPMGRLGE---------AEEVANL 231 (256)
T ss_pred eeeHHHHHHHhh---cCceEeEeccccccChhhhhc---------CHHHHHHHHccCCccccCC---------HHHHHHH
Confidence 566777776655 589999999999988876533 3345555544443333333 5689999
Q ss_pred HHHHHHHhccCCCCCcEEEecCC
Q 010075 312 MIVAMVAHAKQPSDANIYHVGSS 334 (519)
Q Consensus 312 ii~a~~~~~~~~~~~~iyni~s~ 334 (519)
++.++. +...--.+..+.+++|
T Consensus 232 V~fLAS-~~ssYiTG~t~evtGG 253 (256)
T KOG1200|consen 232 VLFLAS-DASSYITGTTLEVTGG 253 (256)
T ss_pred HHHHhc-cccccccceeEEEecc
Confidence 988874 2222112445555554
|
|
| >COG3967 DltE Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=98.98 E-value=2.1e-08 Score=92.34 Aligned_cols=127 Identities=19% Similarity=0.252 Sum_probs=88.2
Q ss_pred cCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 010075 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (519)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (519)
+.|-+||||||+..||..|++++++.| .+|++..|+ ++||.+ .+.+. ..+..
T Consensus 3 ~tgnTiLITGG~sGIGl~lak~f~elg---N~VIi~gR~------e~~L~e----------~~~~~---------p~~~t 54 (245)
T COG3967 3 TTGNTILITGGASGIGLALAKRFLELG---NTVIICGRN------EERLAE----------AKAEN---------PEIHT 54 (245)
T ss_pred ccCcEEEEeCCcchhhHHHHHHHHHhC---CEEEEecCc------HHHHHH----------HHhcC---------cchhe
Confidence 357899999999999999999999999 678888886 344442 12222 45677
Q ss_pred EeccCCCCCCCCChhhhHHHHhc---CccEEEEcCccCC---cc------ccHHHHHHHhHHHHHHHHHHHHhc---cCC
Q 010075 90 VPGDISSEDLGLKDSNLKEELWN---ELDIMVNSAAITK---FD------ERYDVAFGINTLGVIHLVNFAKKC---VKL 154 (519)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~~---~vdiViH~Aa~v~---f~------~~~~~~~~~Nv~gt~~ll~~a~~~---~~l 154 (519)
..+|+.|.+. -.+..+.+.+ ++|++||+||..+ |. +..+.-+.+|+.++.+|..+.... +.-
T Consensus 55 ~v~Dv~d~~~---~~~lvewLkk~~P~lNvliNNAGIqr~~dlt~~e~~~~~~~~eI~~Nl~API~Lt~~~lphl~~q~~ 131 (245)
T COG3967 55 EVCDVADRDS---RRELVEWLKKEYPNLNVLINNAGIQRNEDLTGAEDLLDDAEQEIATNLLAPIRLTALLLPHLLRQPE 131 (245)
T ss_pred eeecccchhh---HHHHHHHHHhhCCchheeeecccccchhhccCCcchhhHHHHHHHHhhhhHHHHHHHHHHHHHhCCC
Confidence 8899984321 1223333333 5899999999864 21 234566899999999988776542 123
Q ss_pred ceEEEEecceeec
Q 010075 155 KVFVHVSTAYVAG 167 (519)
Q Consensus 155 ~~~V~vSTa~v~~ 167 (519)
..+|.|||.-.+-
T Consensus 132 a~IInVSSGLafv 144 (245)
T COG3967 132 ATIINVSSGLAFV 144 (245)
T ss_pred ceEEEeccccccC
Confidence 5789999976554
|
|
| >KOG1610 consensus Corticosteroid 11-beta-dehydrogenase and related short chain-type dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism; General function prediction only] | Back alignment and domain information |
|---|
Probab=98.98 E-value=8.8e-09 Score=101.05 Aligned_cols=165 Identities=18% Similarity=0.228 Sum_probs=115.5
Q ss_pred cCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 010075 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (519)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (519)
..+|.|||||+-..+|..|+.+|.+.| .+|++-.-.+.+. +.|+.+. ..++...
T Consensus 27 ~~~k~VlITGCDSGfG~~LA~~L~~~G---f~V~Agcl~~~ga---e~L~~~~--------------------~s~rl~t 80 (322)
T KOG1610|consen 27 LSDKAVLITGCDSGFGRLLAKKLDKKG---FRVFAGCLTEEGA---ESLRGET--------------------KSPRLRT 80 (322)
T ss_pred cCCcEEEEecCCcHHHHHHHHHHHhcC---CEEEEEeecCchH---HHHhhhh--------------------cCCccee
Confidence 567899999999999999999999999 6778877444332 2222110 0378888
Q ss_pred EeccCCCCCCCCChhhhHHHHhc--CccEEEEcCccCCc--------cccHHHHHHHhHHHHHHHHH----HHHhccCCc
Q 010075 90 VPGDISSEDLGLKDSNLKEELWN--ELDIMVNSAAITKF--------DERYDVAFGINTLGVIHLVN----FAKKCVKLK 155 (519)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~~--~vdiViH~Aa~v~f--------~~~~~~~~~~Nv~gt~~ll~----~a~~~~~l~ 155 (519)
+..|+++++.......++++..+ +.-.|||+||...+ .++++..+++|+.|+.++.. +.++. -.
T Consensus 81 ~~LDVT~~esi~~a~~~V~~~l~~~gLwglVNNAGi~~~~g~~ewl~~~d~~~~l~vNllG~irvT~~~lpLlr~a--rG 158 (322)
T KOG1610|consen 81 LQLDVTKPESVKEAAQWVKKHLGEDGLWGLVNNAGISGFLGPDEWLTVEDYRKVLNVNLLGTIRVTKAFLPLLRRA--RG 158 (322)
T ss_pred EeeccCCHHHHHHHHHHHHHhcccccceeEEeccccccccCccccccHHHHHHHHhhhhhhHHHHHHHHHHHHHhc--cC
Confidence 99999976533333333333332 36789999996543 26788899999999777644 45553 35
Q ss_pred eEEEEecceeecCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcHHHHHH
Q 010075 156 VFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTK 235 (519)
Q Consensus 156 ~~V~vSTa~v~~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~Y~~sK 235 (519)
|+|++||..- ... .+...+|..||
T Consensus 159 RvVnvsS~~G--R~~------------------------------------------------------~p~~g~Y~~SK 182 (322)
T KOG1610|consen 159 RVVNVSSVLG--RVA------------------------------------------------------LPALGPYCVSK 182 (322)
T ss_pred eEEEeccccc--Ccc------------------------------------------------------CcccccchhhH
Confidence 9999998742 111 02345799999
Q ss_pred HHHHHHHHHh-----hcCCcEEEEecCc
Q 010075 236 TMGEMLMQQS-----KENLSLVIIRPTV 258 (519)
Q Consensus 236 ~~aE~lv~~~-----~~~lp~~IvRPs~ 258 (519)
+..|...... ..|+.+.|+-||.
T Consensus 183 ~aVeaf~D~lR~EL~~fGV~VsiiePG~ 210 (322)
T KOG1610|consen 183 FAVEAFSDSLRRELRPFGVKVSIIEPGF 210 (322)
T ss_pred HHHHHHHHHHHHHHHhcCcEEEEeccCc
Confidence 9999887543 5689999999994
|
|
| >PF13561 adh_short_C2: Enoyl-(Acyl carrier protein) reductase; PDB: 2UV8_B 3HMJ_A 2VKZ_C 1O5I_A 2P91_C 2OP0_A 2OL4_B 1NHW_A 1NNU_B 2O2Y_B | Back alignment and domain information |
|---|
Probab=98.95 E-value=6.4e-09 Score=101.44 Aligned_cols=218 Identities=17% Similarity=0.168 Sum_probs=137.4
Q ss_pred CCc--cHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEEeccCCC
Q 010075 19 GVT--GFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVPGDISS 96 (519)
Q Consensus 19 GaT--GFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v~gDl~~ 96 (519)
|++ +.||++++++|++.| .+|++..|+.... .+.+ +.+.++.+ . .++.+|+++
T Consensus 1 g~~~s~GiG~aia~~l~~~G---a~V~~~~~~~~~~--~~~~----------~~l~~~~~--------~--~~~~~D~~~ 55 (241)
T PF13561_consen 1 GAGSSSGIGRAIARALAEEG---ANVILTDRNEEKL--ADAL----------EELAKEYG--------A--EVIQCDLSD 55 (241)
T ss_dssp STSSTSHHHHHHHHHHHHTT---EEEEEEESSHHHH--HHHH----------HHHHHHTT--------S--EEEESCTTS
T ss_pred CCCCCCChHHHHHHHHHHCC---CEEEEEeCChHHH--HHHH----------HHHHHHcC--------C--ceEeecCcc
Confidence 666 999999999999999 7889999886431 1111 12223322 2 359999995
Q ss_pred CCCCCChhhhHHHHh-cCccEEEEcCccCCc-----------cccHHHHHHHhHHHHHHHHHHHHhc-cCCceEEEEecc
Q 010075 97 EDLGLKDSNLKEELW-NELDIMVNSAAITKF-----------DERYDVAFGINTLGVIHLVNFAKKC-VKLKVFVHVSTA 163 (519)
Q Consensus 97 ~~lgls~~~~~~~l~-~~vdiViH~Aa~v~f-----------~~~~~~~~~~Nv~gt~~ll~~a~~~-~~l~~~V~vSTa 163 (519)
++.-..-.+...+.. .++|++||+|+.... .+.+...+++|+.+...+.+.+.+. +.-.++|++||.
T Consensus 56 ~~~v~~~~~~~~~~~~g~iD~lV~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gsii~iss~ 135 (241)
T PF13561_consen 56 EESVEALFDEAVERFGGRIDILVNNAGISPPSNVEKPLLDLSEEDWDKTFDINVFSPFLLAQAALPLMKKGGSIINISSI 135 (241)
T ss_dssp HHHHHHHHHHHHHHHCSSESEEEEEEESCTGGGTSSSGGGSHHHHHHHHHHHHTHHHHHHHHHHHHHHHHEEEEEEEEEG
T ss_pred hHHHHHHHHHHHhhcCCCeEEEEecccccccccCCCChHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCcccccch
Confidence 321000001111224 679999999987643 1467788999999999998887542 233689999987
Q ss_pred eeecCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcHHHHHHHHHHHHHH
Q 010075 164 YVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLMQ 243 (519)
Q Consensus 164 ~v~~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~Y~~sK~~aE~lv~ 243 (519)
...... +....|+.+|+..+.+++
T Consensus 136 ~~~~~~--------------------------------------------------------~~~~~y~~sKaal~~l~r 159 (241)
T PF13561_consen 136 AAQRPM--------------------------------------------------------PGYSAYSASKAALEGLTR 159 (241)
T ss_dssp GGTSBS--------------------------------------------------------TTTHHHHHHHHHHHHHHH
T ss_pred hhcccC--------------------------------------------------------ccchhhHHHHHHHHHHHH
Confidence 542211 123489999999999988
Q ss_pred Hh-----h-cCCcEEEEecCccccCCCCCCCcccccccccHHHHHHhhcCCceeeccCCCceeeeeeHHHHHHHHHHHHH
Q 010075 244 QS-----K-ENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMIVAMV 317 (519)
Q Consensus 244 ~~-----~-~~lp~~IvRPs~V~g~~~~p~~gw~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~d~vpVDdva~aii~a~~ 317 (519)
.. . .++++..|.||.|..+..+.. .....+....... . ....+...+|||+++..++.
T Consensus 160 ~lA~el~~~~gIrVN~V~pG~i~t~~~~~~-------~~~~~~~~~~~~~----~-----pl~r~~~~~evA~~v~fL~s 223 (241)
T PF13561_consen 160 SLAKELAPKKGIRVNAVSPGPIETPMTERI-------PGNEEFLEELKKR----I-----PLGRLGTPEEVANAVLFLAS 223 (241)
T ss_dssp HHHHHHGGHGTEEEEEEEESSBSSHHHHHH-------HTHHHHHHHHHHH----S-----TTSSHBEHHHHHHHHHHHHS
T ss_pred HHHHHhccccCeeeeeecccceeccchhcc-------ccccchhhhhhhh----h-----ccCCCcCHHHHHHHHHHHhC
Confidence 64 4 589999999998876432110 0111122221111 1 11224688999999999886
Q ss_pred HhccCCCCCcEEEecCC
Q 010075 318 AHAKQPSDANIYHVGSS 334 (519)
Q Consensus 318 ~~~~~~~~~~iyni~s~ 334 (519)
.... .-.+++..+.+|
T Consensus 224 ~~a~-~itG~~i~vDGG 239 (241)
T PF13561_consen 224 DAAS-YITGQVIPVDGG 239 (241)
T ss_dssp GGGT-TGTSEEEEESTT
T ss_pred cccc-CccCCeEEECCC
Confidence 4322 223677777665
|
... |
| >KOG4169 consensus 15-hydroxyprostaglandin dehydrogenase and related dehydrogenases [Lipid transport and metabolism; General function prediction only] | Back alignment and domain information |
|---|
Probab=98.87 E-value=1.2e-08 Score=95.32 Aligned_cols=228 Identities=18% Similarity=0.240 Sum_probs=139.7
Q ss_pred cCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 010075 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (519)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (519)
+.||++++||+.|.||..+.+.|+..+ ++.+.++-|-.+ ... +-.|++..| ..++.+
T Consensus 3 ~tGKna~vtggagGIGl~~sk~Ll~kg--ik~~~i~~~~En-~~a-------------~akL~ai~p-------~~~v~F 59 (261)
T KOG4169|consen 3 LTGKNALVTGGAGGIGLATSKALLEKG--IKVLVIDDSEEN-PEA-------------IAKLQAINP-------SVSVIF 59 (261)
T ss_pred ccCceEEEecCCchhhHHHHHHHHHcC--chheeehhhhhC-HHH-------------HHHHhccCC-------CceEEE
Confidence 469999999999999999999999987 333333333322 212 223444443 478999
Q ss_pred EeccCCCCCCCCChhhhHHH---HhcCccEEEEcCccCCccccHHHHHHHhHHH----HHHHHHHHHhcc--CCceEEEE
Q 010075 90 VPGDISSEDLGLKDSNLKEE---LWNELDIMVNSAAITKFDERYDVAFGINTLG----VIHLVNFAKKCV--KLKVFVHV 160 (519)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~---l~~~vdiViH~Aa~v~f~~~~~~~~~~Nv~g----t~~ll~~a~~~~--~l~~~V~v 160 (519)
+.+|+++.. ++ ++..++ -+..+|++||.|+... +.+++..+.+|+.| |...|....+-+ .-.-+|.+
T Consensus 60 ~~~DVt~~~-~~--~~~f~ki~~~fg~iDIlINgAGi~~-dkd~e~Ti~vNLtgvin~T~~alpyMdk~~gG~GGiIvNm 135 (261)
T KOG4169|consen 60 IKCDVTNRG-DL--EAAFDKILATFGTIDILINGAGILD-DKDWERTINVNLTGVINGTQLALPYMDKKQGGKGGIIVNM 135 (261)
T ss_pred EEeccccHH-HH--HHHHHHHHHHhCceEEEEccccccc-chhHHHhhccchhhhhhhhhhhhhhhhhhcCCCCcEEEEe
Confidence 999999621 11 111112 2346999999999854 67799999999876 445555554432 34578999
Q ss_pred ecceeecCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcHHHHHHH----
Q 010075 161 STAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKT---- 236 (519)
Q Consensus 161 STa~v~~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~Y~~sK~---- 236 (519)
||.+-.-+. | -...|+.||+
T Consensus 136 sSv~GL~P~-------------p-------------------------------------------~~pVY~AsKaGVvg 159 (261)
T KOG4169|consen 136 SSVAGLDPM-------------P-------------------------------------------VFPVYAASKAGVVG 159 (261)
T ss_pred ccccccCcc-------------c-------------------------------------------cchhhhhcccceee
Confidence 987533211 0 1123666664
Q ss_pred ----HHHHHHHHhhcCCcEEEEecCccccCCCCCC---CcccccccccHHHHHHhhcCCceeeccCCCceeeeeeHHHHH
Q 010075 237 ----MGEMLMQQSKENLSLVIIRPTVVSGTYKEPF---PGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVV 309 (519)
Q Consensus 237 ----~aE~lv~~~~~~lp~~IvRPs~V~g~~~~p~---~gw~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~d~vpVDdva 309 (519)
+|...-.+ +.|+.+..+=||.+-....+.+ .+|.+--......+..+. --+-.+++
T Consensus 160 FTRSla~~ayy~-~sGV~~~avCPG~t~t~l~~~~~~~~~~~e~~~~~~~~l~~~~----------------~q~~~~~a 222 (261)
T KOG4169|consen 160 FTRSLADLAYYQ-RSGVRFNAVCPGFTRTDLAENIDASGGYLEYSDSIKEALERAP----------------KQSPACCA 222 (261)
T ss_pred eehhhhhhhhHh-hcCEEEEEECCCcchHHHHHHHHhcCCcccccHHHHHHHHHcc----------------cCCHHHHH
Confidence 33322211 4689999999998766543333 344432222222222111 13345789
Q ss_pred HHHHHHHHHhccCCCCCcEEEecCCCCCchhH
Q 010075 310 NAMIVAMVAHAKQPSDANIYHVGSSLRNPVTL 341 (519)
Q Consensus 310 ~aii~a~~~~~~~~~~~~iyni~s~~~~~i~~ 341 (519)
..++.+++... ++.+|-+.+|...|+.|
T Consensus 223 ~~~v~aiE~~~----NGaiw~v~~g~l~~~~~ 250 (261)
T KOG4169|consen 223 INIVNAIEYPK----NGAIWKVDSGSLEPVFK 250 (261)
T ss_pred HHHHHHHhhcc----CCcEEEEecCcEEEeee
Confidence 99999998633 36799999887666655
|
|
| >KOG1209 consensus 1-Acyl dihydroxyacetone phosphate reductase and related dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=98.84 E-value=2.2e-08 Score=92.44 Aligned_cols=166 Identities=14% Similarity=0.125 Sum_probs=113.9
Q ss_pred CCEEEEeCC-ccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEE
Q 010075 12 NKTILVSGV-TGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFV 90 (519)
Q Consensus 12 ~k~VlITGa-TGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v 90 (519)
.|.|+|||+ +|.||.+|++++.+.| .+||+..|+...-. .|. . ..++.+.
T Consensus 7 ~k~VlItgcs~GGIG~ala~ef~~~G---~~V~AtaR~~e~M~---~L~-------------~----------~~gl~~~ 57 (289)
T KOG1209|consen 7 PKKVLITGCSSGGIGYALAKEFARNG---YLVYATARRLEPMA---QLA-------------I----------QFGLKPY 57 (289)
T ss_pred CCeEEEeecCCcchhHHHHHHHHhCC---eEEEEEccccchHh---hHH-------------H----------hhCCeeE
Confidence 478999985 6899999999999999 78899999764322 221 0 2467889
Q ss_pred eccCCCCCCCCChhhhHHH-HhcCccEEEEcCccC-Cc------cccHHHHHHHhHHHHHHHHHHHHhc--cCCceEEEE
Q 010075 91 PGDISSEDLGLKDSNLKEE-LWNELDIMVNSAAIT-KF------DERYDVAFGINTLGVIHLVNFAKKC--VKLKVFVHV 160 (519)
Q Consensus 91 ~gDl~~~~lgls~~~~~~~-l~~~vdiViH~Aa~v-~f------~~~~~~~~~~Nv~gt~~ll~~a~~~--~~l~~~V~v 160 (519)
..|+++++-...-...+.. -..+.|+++|+||.. .+ .+..+..+++|+.|..++.++...+ +.-..+|++
T Consensus 58 kLDV~~~~~V~~v~~evr~~~~Gkld~L~NNAG~~C~~Pa~d~~i~ave~~f~vNvfG~irM~~a~~h~likaKGtIVnv 137 (289)
T KOG1209|consen 58 KLDVSKPEEVVTVSGEVRANPDGKLDLLYNNAGQSCTFPALDATIAAVEQCFKVNVFGHIRMCRALSHFLIKAKGTIVNV 137 (289)
T ss_pred EeccCChHHHHHHHHHHhhCCCCceEEEEcCCCCCcccccccCCHHHHHhhhccceeeeehHHHHHHHHHHHccceEEEe
Confidence 9999975321111111101 112589999999974 22 2456777999999988887776543 234579999
Q ss_pred ecceeecCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcHHHHHHHHHHH
Q 010075 161 STAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEM 240 (519)
Q Consensus 161 STa~v~~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~Y~~sK~~aE~ 240 (519)
.|..++.. ++|...|+.||++..+
T Consensus 138 gSl~~~vp--------------------------------------------------------fpf~~iYsAsKAAiha 161 (289)
T KOG1209|consen 138 GSLAGVVP--------------------------------------------------------FPFGSIYSASKAAIHA 161 (289)
T ss_pred cceeEEec--------------------------------------------------------cchhhhhhHHHHHHHH
Confidence 99876642 1466789999999988
Q ss_pred HHHHh-----hcCCcEEEEecCccccC
Q 010075 241 LMQQS-----KENLSLVIIRPTVVSGT 262 (519)
Q Consensus 241 lv~~~-----~~~lp~~IvRPs~V~g~ 262 (519)
+.+.. ..+++++-+-+|.|-..
T Consensus 162 y~~tLrlEl~PFgv~Vin~itGGv~T~ 188 (289)
T KOG1209|consen 162 YARTLRLELKPFGVRVINAITGGVATD 188 (289)
T ss_pred hhhhcEEeeeccccEEEEecccceecc
Confidence 87765 23666776666666443
|
|
| >PRK06300 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.82 E-value=7.7e-08 Score=97.04 Aligned_cols=244 Identities=11% Similarity=0.092 Sum_probs=128.7
Q ss_pred cCCCEEEEeCCc--cHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHH-----HHHHH-Hhhhhh---HHHHHhhhccc
Q 010075 10 LENKTILVSGVT--GFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAAL-----RFQNE-VLAKDV---FNVLKEKWGTR 78 (519)
Q Consensus 10 ~~~k~VlITGaT--GFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~-----rl~~~-~~~~~~---f~~l~~~~~~~ 78 (519)
+.||+++||||+ ..||+++++.|.+.| .+|++..|...-..... +.... ...... +.+... ...+
T Consensus 6 ~~gk~alITGa~~~~GIG~a~A~~la~~G---a~Vvv~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~-~~~d 81 (299)
T PRK06300 6 LTGKIAFIAGIGDDQGYGWGIAKALAEAG---ATILVGTWVPIYKIFSQSLELGKFDASRKLSNGSLLTFAKIYP-MDAS 81 (299)
T ss_pred CCCCEEEEeCCCCCCCHHHHHHHHHHHCC---CEEEEEeccchhhhhhhhcccccccccccccccchhhhhhHHH-hhhh
Confidence 479999999994 889999999999999 67777554310000000 00000 000000 000000 0000
Q ss_pred cccccCCceEEEeccCCCCCC--CCChhh---hHHHH---hcCccEEEEcCccCC-----c----cccHHHHHHHhHHHH
Q 010075 79 LNSFISEKITFVPGDISSEDL--GLKDSN---LKEEL---WNELDIMVNSAAITK-----F----DERYDVAFGINTLGV 141 (519)
Q Consensus 79 ~~~~~~~~v~~v~gDl~~~~l--gls~~~---~~~~l---~~~vdiViH~Aa~v~-----f----~~~~~~~~~~Nv~gt 141 (519)
.....-+..|+.+... .+++++ ..+.+ ..++|++||+||... + .+.++..+++|+.|+
T Consensus 82 -----~~~~~~v~~~i~~~~~~~~~~~~si~~~~~~v~~~~G~lDvLVnNAG~~~~~~~~~~~~~~e~~~~~~~vNl~g~ 156 (299)
T PRK06300 82 -----FDTPEDVPEEIRENKRYKDLSGYTISEVAEQVKKDFGHIDILVHSLANSPEISKPLLETSRKGYLAALSTSSYSF 156 (299)
T ss_pred -----cCCCEEeecccCccccccCCCHHHHHHHHHHHHHHcCCCcEEEECCCcCcccCCChhhCCHHHHHHHHHHHhHHH
Confidence 0111223333332110 011111 12222 246999999997531 2 246788899999999
Q ss_pred HHHHHHHHh-ccCCceEEEEecceeecCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhcccc
Q 010075 142 IHLVNFAKK-CVKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTE 220 (519)
Q Consensus 142 ~~ll~~a~~-~~~l~~~V~vSTa~v~~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~ 220 (519)
..+.+.+.. +..-.++|.+||........
T Consensus 157 ~~l~~a~~p~m~~~G~ii~iss~~~~~~~p-------------------------------------------------- 186 (299)
T PRK06300 157 VSLLSHFGPIMNPGGSTISLTYLASMRAVP-------------------------------------------------- 186 (299)
T ss_pred HHHHHHHHHHhhcCCeEEEEeehhhcCcCC--------------------------------------------------
Confidence 999888764 32335788888754321100
Q ss_pred ccccCCCCcHHHHHHHHHHHHHHHh-----h-cCCcEEEEecCccccCCCCCCCcccccccccHHHHHHhhcCCceeecc
Q 010075 221 RAKLHGWPNTYVFTKTMGEMLMQQS-----K-ENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVG 294 (519)
Q Consensus 221 ~~~~~~~~n~Y~~sK~~aE~lv~~~-----~-~~lp~~IvRPs~V~g~~~~p~~gw~~~~~~~~~~i~~~~~g~~~~~~~ 294 (519)
.....|+.||+..+.+.+.. . .++.+..+-||.|-.+...... ........... . .+
T Consensus 187 -----~~~~~Y~asKaAl~~lt~~la~el~~~~gIrVn~V~PG~v~T~~~~~~~-------~~~~~~~~~~~-~---~p- 249 (299)
T PRK06300 187 -----GYGGGMSSAKAALESDTKVLAWEAGRRWGIRVNTISAGPLASRAGKAIG-------FIERMVDYYQD-W---AP- 249 (299)
T ss_pred -----CccHHHHHHHHHHHHHHHHHHHHhCCCCCeEEEEEEeCCccChhhhccc-------ccHHHHHHHHh-c---CC-
Confidence 11125999999998887654 2 3799999999988665321100 00011111100 0 01
Q ss_pred CCCceeeeeeHHHHHHHHHHHHHHhccCCCCCcEEEecCC
Q 010075 295 ETKVIMDVIPVDMVVNAMIVAMVAHAKQPSDANIYHVGSS 334 (519)
Q Consensus 295 ~~~~~~d~vpVDdva~aii~a~~~~~~~~~~~~iyni~s~ 334 (519)
.......+++++++..++..... .-.++++.+.+|
T Consensus 250 ----~~r~~~peevA~~v~~L~s~~~~-~itG~~i~vdGG 284 (299)
T PRK06300 250 ----LPEPMEAEQVGAAAAFLVSPLAS-AITGETLYVDHG 284 (299)
T ss_pred ----CCCCcCHHHHHHHHHHHhCcccc-CCCCCEEEECCC
Confidence 11235679999999888753222 123567777655
|
|
| >TIGR02813 omega_3_PfaA polyketide-type polyunsaturated fatty acid synthase PfaA | Back alignment and domain information |
|---|
Probab=98.82 E-value=1.2e-07 Score=117.51 Aligned_cols=181 Identities=12% Similarity=0.135 Sum_probs=118.2
Q ss_pred hcCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcc--------cHHHHHHHHHhhh---------------
Q 010075 9 FLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADID--------SAALRFQNEVLAK--------------- 65 (519)
Q Consensus 9 ~~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~--------~~~~rl~~~~~~~--------------- 65 (519)
+-+|++++||||+|.||..++++|++.+. .+|+++.|+.... ....+++..+.+.
T Consensus 1994 l~~g~vvLVTGGarGIG~aiA~~LA~~~g--a~viL~gRs~~~~~~p~~a~~~~~~~lk~~~~~~l~~~g~~~~P~~i~~ 2071 (2582)
T TIGR02813 1994 LNSDDVFLVTGGAKGVTFECALELAKQCQ--AHFILAGRSSFDDNEPSWAQGKDENELKKAAIQHLQASGEKPTPKKVDA 2071 (2582)
T ss_pred cCCCCEEEEeCCCCHHHHHHHHHHHHhcC--CEEEEEeCCcccccCchhhhccchHHHHHhhhhhhhhcccccccchhhh
Confidence 44689999999999999999999998742 5889999983110 0001111111100
Q ss_pred ---------hhHHHHHhhhccccccccCCceEEEeccCCCCCCCCChhhhHHHHh------cCccEEEEcCccCCc----
Q 010075 66 ---------DVFNVLKEKWGTRLNSFISEKITFVPGDISSEDLGLKDSNLKEELW------NELDIMVNSAAITKF---- 126 (519)
Q Consensus 66 ---------~~f~~l~~~~~~~~~~~~~~~v~~v~gDl~~~~lgls~~~~~~~l~------~~vdiViH~Aa~v~f---- 126 (519)
.+-..+.+ + .....++.++.+|++++ +..+.++ .++|+|||+||....
T Consensus 2072 ~~~~~~~~~ei~~~la~-----l-~~~G~~v~y~~~DVtD~-------~av~~av~~v~~~g~IDgVVhnAGv~~~~~i~ 2138 (2582)
T TIGR02813 2072 LVRPVLSSLEIAQALAA-----F-KAAGASAEYASADVTNS-------VSVAATVQPLNKTLQITGIIHGAGVLADKHIQ 2138 (2582)
T ss_pred cccccchhHHHHHHHHH-----H-HhcCCcEEEEEccCCCH-------HHHHHHHHHHHHhCCCcEEEECCccCCCCCcc
Confidence 00000110 0 01135688999999963 2222222 258999999997532
Q ss_pred ---cccHHHHHHHhHHHHHHHHHHHHhccCCceEEEEecceee-cCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhh
Q 010075 127 ---DERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAYVA-GERTGLILENPLDGASGLDFDAEMKVIDQKLNELKT 202 (519)
Q Consensus 127 ---~~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V~vSTa~v~-~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~ 202 (519)
.+.++..+++|+.|+.++++.+... ..+.||++||.... |..
T Consensus 2139 ~~t~e~f~~v~~~nv~G~~~Ll~al~~~-~~~~IV~~SSvag~~G~~--------------------------------- 2184 (2582)
T TIGR02813 2139 DKTLEEFNAVYGTKVDGLLSLLAALNAE-NIKLLALFSSAAGFYGNT--------------------------------- 2184 (2582)
T ss_pred cCCHHHHHHHHHHHHHHHHHHHHHHHHh-CCCeEEEEechhhcCCCC---------------------------------
Confidence 2568888999999999999998764 56789999997543 221
Q ss_pred cCCChHHHHHHHhhccccccccCCCCcHHHHHHHHHHHHHHHh---hcCCcEEEEecCccccC
Q 010075 203 KGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLMQQS---KENLSLVIIRPTVVSGT 262 (519)
Q Consensus 203 ~~~~~~~~~~~~~~lg~~~~~~~~~~n~Y~~sK~~aE~lv~~~---~~~lp~~IvRPs~V~g~ 262 (519)
....|+.+|...+.+.... ..++.+..+.||.+-+.
T Consensus 2185 ------------------------gqs~YaaAkaaL~~la~~la~~~~~irV~sI~wG~wdtg 2223 (2582)
T TIGR02813 2185 ------------------------GQSDYAMSNDILNKAALQLKALNPSAKVMSFNWGPWDGG 2223 (2582)
T ss_pred ------------------------CcHHHHHHHHHHHHHHHHHHHHcCCcEEEEEECCeecCC
Confidence 1235999998887777654 33578888888876553
|
Members of the seed for this alignment are involved in omega-3 polyunsaturated fatty acid biosynthesis, such as the protein PfaA from the eicosapentaenoic acid biosynthesis operon in Photobacterium profundum strain SS9. PfaA is encoded together with PfaB, PfaC, and PfaD, and the functions of the individual polypeptides have not yet been described. More distant homologs of PfaA, also included with the reach of this model, appear to be involved in polyketide-like biosynthetic mechanisms of polyunsaturated fatty acid biosynthesis, an alternative to the more familiar iterated mechanism of chain extension and desaturation, and in most cases are encoded near genes for homologs of PfaB, PfaC, and/or PfaD. |
| >PRK12428 3-alpha-hydroxysteroid dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.81 E-value=3.3e-08 Score=96.53 Aligned_cols=164 Identities=12% Similarity=0.057 Sum_probs=102.4
Q ss_pred HHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEEeccCCCCCCCCChhhhH
Q 010075 28 FIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVPGDISSEDLGLKDSNLK 107 (519)
Q Consensus 28 Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v~gDl~~~~lgls~~~~~ 107 (519)
++++|++.| .+|+++.|+..... ...++.+|+++. +..
T Consensus 1 ~a~~l~~~G---~~Vv~~~r~~~~~~--------------------------------~~~~~~~Dl~~~-------~~v 38 (241)
T PRK12428 1 TARLLRFLG---ARVIGVDRREPGMT--------------------------------LDGFIQADLGDP-------ASI 38 (241)
T ss_pred ChHHHHhCC---CEEEEEeCCcchhh--------------------------------hhHhhcccCCCH-------HHH
Confidence 467888888 67888888753210 013468899852 223
Q ss_pred HHHh----cCccEEEEcCccCCccccHHHHHHHhHHHHHHHHHHHHhc-cCCceEEEEecceeecCcCC-eeecccCCCC
Q 010075 108 EELW----NELDIMVNSAAITKFDERYDVAFGINTLGVIHLVNFAKKC-VKLKVFVHVSTAYVAGERTG-LILENPLDGA 181 (519)
Q Consensus 108 ~~l~----~~vdiViH~Aa~v~f~~~~~~~~~~Nv~gt~~ll~~a~~~-~~l~~~V~vSTa~v~~~~~~-~i~E~~~~e~ 181 (519)
+.+. .++|+|||+||... ..+++..+++|+.|+..+++++.+. .+-.++|++||...++.... ...|....
T Consensus 39 ~~~~~~~~~~iD~li~nAG~~~-~~~~~~~~~vN~~~~~~l~~~~~~~~~~~g~Iv~isS~~~~~~~~~~~~~~~~~~-- 115 (241)
T PRK12428 39 DAAVAALPGRIDALFNIAGVPG-TAPVELVARVNFLGLRHLTEALLPRMAPGGAIVNVASLAGAEWPQRLELHKALAA-- 115 (241)
T ss_pred HHHHHHhcCCCeEEEECCCCCC-CCCHHHhhhhchHHHHHHHHHHHHhccCCcEEEEeCcHHhhccccchHHHHhhhc--
Confidence 3333 36999999999754 3578889999999999999998652 23368999999987653210 00000000
Q ss_pred CCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcHHHHHHHHHHHHHHHh------hcCCcEEEEe
Q 010075 182 SGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLMQQS------KENLSLVIIR 255 (519)
Q Consensus 182 ~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~Y~~sK~~aE~lv~~~------~~~lp~~IvR 255 (519)
..+. ++.+. ............|+.||+..+.+.+.. ..++.+..++
T Consensus 116 -~~~~--------------------~~~~~-------~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~e~~~~girvn~v~ 167 (241)
T PRK12428 116 -TASF--------------------DEGAA-------WLAAHPVALATGYQLSKEALILWTMRQAQPWFGARGIRVNCVA 167 (241)
T ss_pred -cchH--------------------HHHHH-------hhhccCCCcccHHHHHHHHHHHHHHHHHHHhhhccCeEEEEee
Confidence 0000 00000 000001123468999999998876533 3479999999
Q ss_pred cCccccCCC
Q 010075 256 PTVVSGTYK 264 (519)
Q Consensus 256 Ps~V~g~~~ 264 (519)
||.|.++..
T Consensus 168 PG~v~T~~~ 176 (241)
T PRK12428 168 PGPVFTPIL 176 (241)
T ss_pred cCCccCccc
Confidence 999987643
|
|
| >KOG1611 consensus Predicted short chain-type dehydrogenase [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.77 E-value=1.2e-07 Score=88.77 Aligned_cols=212 Identities=15% Similarity=0.282 Sum_probs=126.8
Q ss_pred CCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEE
Q 010075 11 ENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFV 90 (519)
Q Consensus 11 ~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v 90 (519)
+.++||||||.-.||-.|+++|+. .+++..|+...|..... .+.++. ......+++++
T Consensus 2 spksv~ItGaNRGIGlgLVk~llk-~~~i~~iiat~r~~e~a--~~~l~~-------------------k~~~d~rvHii 59 (249)
T KOG1611|consen 2 SPKSVFITGANRGIGLGLVKELLK-DKGIEVIIATARDPEKA--ATELAL-------------------KSKSDSRVHII 59 (249)
T ss_pred CCccEEEeccCcchhHHHHHHHhc-CCCcEEEEEecCChHHh--hHHHHH-------------------hhccCCceEEE
Confidence 457899999999999999999996 46776666666644332 222221 01124789999
Q ss_pred eccCCCCCCCCChhhhHHHH--hcCccEEEEcCccCC-c-------cccHHHHHHHhHHHHHHHHHH----HHhcc----
Q 010075 91 PGDISSEDLGLKDSNLKEEL--WNELDIMVNSAAITK-F-------DERYDVAFGINTLGVIHLVNF----AKKCV---- 152 (519)
Q Consensus 91 ~gDl~~~~lgls~~~~~~~l--~~~vdiViH~Aa~v~-f-------~~~~~~~~~~Nv~gt~~ll~~----a~~~~---- 152 (519)
+.|++..+.--...+.++.+ .+++|++|++||... + .+.+-..+++|+.|+..+.+. .++..
T Consensus 60 ~Ldvt~deS~~~~~~~V~~iVg~~GlnlLinNaGi~~~y~~~~~~~r~~~~~~~~tN~v~~il~~Q~~lPLLkkaas~~~ 139 (249)
T KOG1611|consen 60 QLDVTCDESIDNFVQEVEKIVGSDGLNLLINNAGIALSYNTVLKPSRAVLLEQYETNAVGPILLTQAFLPLLKKAASKVS 139 (249)
T ss_pred EEecccHHHHHHHHHHHHhhcccCCceEEEeccceeeecccccCCcHHHHHHHhhhcchhHHHHHHHHHHHHHHHhhccc
Confidence 99999633211111112233 246899999999852 2 133566789999887665443 33321
Q ss_pred ------CCceEEEEecceeecCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCC
Q 010075 153 ------KLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHG 226 (519)
Q Consensus 153 ------~l~~~V~vSTa~v~~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~ 226 (519)
+...+|++||.... ..+. + + .
T Consensus 140 gd~~s~~raaIinisS~~~s--~~~~-----~----~------------------------------------------~ 166 (249)
T KOG1611|consen 140 GDGLSVSRAAIINISSSAGS--IGGF-----R----P------------------------------------------G 166 (249)
T ss_pred CCcccccceeEEEeeccccc--cCCC-----C----C------------------------------------------c
Confidence 12378888876432 1110 0 0 2
Q ss_pred CCcHHHHHHHHHHHHHHHh-----hcCCcEEEEecCccccCCCCCCCcccccccccHHHHHHhhcCCceeeccCCCceee
Q 010075 227 WPNTYVFTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMD 301 (519)
Q Consensus 227 ~~n~Y~~sK~~aE~lv~~~-----~~~lp~~IvRPs~V~g~~~~p~~gw~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~d 301 (519)
....|..||++.-...++. ..++-++-+.| ||+..-. |.+ -.
T Consensus 167 ~~~AYrmSKaAlN~f~ksls~dL~~~~ilv~sihP------------GwV~TDM------------------gg~---~a 213 (249)
T KOG1611|consen 167 GLSAYRMSKAALNMFAKSLSVDLKDDHILVVSIHP------------GWVQTDM------------------GGK---KA 213 (249)
T ss_pred chhhhHhhHHHHHHHHHHhhhhhcCCcEEEEEecC------------CeEEcCC------------------CCC---Cc
Confidence 3457999999998888865 22333444444 5544210 111 12
Q ss_pred eeeHHHHHHHHHHHHHHhccCCCCCcEEEe
Q 010075 302 VIPVDMVVNAMIVAMVAHAKQPSDANIYHV 331 (519)
Q Consensus 302 ~vpVDdva~aii~a~~~~~~~~~~~~iyni 331 (519)
.+-|++-+..++....+..... +|..||-
T Consensus 214 ~ltveeSts~l~~~i~kL~~~h-nG~ffn~ 242 (249)
T KOG1611|consen 214 ALTVEESTSKLLASINKLKNEH-NGGFFNR 242 (249)
T ss_pred ccchhhhHHHHHHHHHhcCccc-CcceEcc
Confidence 3678888888888887654332 4667776
|
|
| >KOG1210 consensus Predicted 3-ketosphinganine reductase [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=98.68 E-value=3.8e-07 Score=89.57 Aligned_cols=202 Identities=16% Similarity=0.155 Sum_probs=127.5
Q ss_pred CEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEEec
Q 010075 13 KTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVPG 92 (519)
Q Consensus 13 k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v~g 92 (519)
++|+|||++..+|+.++..+.++| ..|.++.|+++......+..+ +. .....+.+..+
T Consensus 34 ~hi~itggS~glgl~la~e~~~~g---a~Vti~ar~~~kl~~a~~~l~-l~------------------~~~~~v~~~S~ 91 (331)
T KOG1210|consen 34 RHILITGGSSGLGLALALECKREG---ADVTITARSGKKLLEAKAELE-LL------------------TQVEDVSYKSV 91 (331)
T ss_pred ceEEEecCcchhhHHHHHHHHHcc---CceEEEeccHHHHHHHHhhhh-hh------------------hccceeeEecc
Confidence 489999999999999999999999 566899999766544332210 00 01133778899
Q ss_pred cCCCCCCCCChhhhHHHHh-------cCccEEEEcCccCC---c----cccHHHHHHHhHHHHHHHHHHHHh-ccC---C
Q 010075 93 DISSEDLGLKDSNLKEELW-------NELDIMVNSAAITK---F----DERYDVAFGINTLGVIHLVNFAKK-CVK---L 154 (519)
Q Consensus 93 Dl~~~~lgls~~~~~~~l~-------~~vdiViH~Aa~v~---f----~~~~~~~~~~Nv~gt~~ll~~a~~-~~~---l 154 (519)
|+.+ -+..+..+ .-+|.+|||||..- | .+..+...++|..||.++...+.. ++. .
T Consensus 92 d~~~-------Y~~v~~~~~~l~~~~~~~d~l~~cAG~~v~g~f~~~s~~~v~~~m~vNylgt~~v~~~~~~~mk~~~~~ 164 (331)
T KOG1210|consen 92 DVID-------YDSVSKVIEELRDLEGPIDNLFCCAGVAVPGLFEDLSPEVVEKLMDVNYLGTVNVAKAAARAMKKREHL 164 (331)
T ss_pred cccc-------HHHHHHHHhhhhhccCCcceEEEecCcccccccccCCHHHHHHHHHhhhhhhHHHHHHHHHHhhccccC
Confidence 9963 33333332 35899999999741 2 245677899999999999887643 333 3
Q ss_pred ceEEEEecceeecCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcHHHHH
Q 010075 155 KVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFT 234 (519)
Q Consensus 155 ~~~V~vSTa~v~~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~Y~~s 234 (519)
.+++.+||....-.- ....+|..+
T Consensus 165 g~I~~vsS~~a~~~i--------------------------------------------------------~GysaYs~s 188 (331)
T KOG1210|consen 165 GRIILVSSQLAMLGI--------------------------------------------------------YGYSAYSPS 188 (331)
T ss_pred cEEEEehhhhhhcCc--------------------------------------------------------ccccccccH
Confidence 378888886543211 112345555
Q ss_pred H----HHHHHHHHHh-hcCCcEEEEecCccccCCCCCCCcccccccccHHHHHHhhcCCceeeccCCCceeeeeeHHHHH
Q 010075 235 K----TMGEMLMQQS-KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVV 309 (519)
Q Consensus 235 K----~~aE~lv~~~-~~~lp~~IvRPs~V~g~~~~p~~gw~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~d~vpVDdva 309 (519)
| .+||.+-++. ..++.++.+-|+.+-.++-+ .. +...+... ..+ +...+.++.+++|
T Consensus 189 K~alrgLa~~l~qE~i~~~v~Vt~~~P~~~~tpGfE------~E-n~tkP~~t-------~ii----~g~ss~~~~e~~a 250 (331)
T KOG1210|consen 189 KFALRGLAEALRQELIKYGVHVTLYYPPDTLTPGFE------RE-NKTKPEET-------KII----EGGSSVIKCEEMA 250 (331)
T ss_pred HHHHHHHHHHHHHHHhhcceEEEEEcCCCCCCCccc------cc-cccCchhe-------eee----cCCCCCcCHHHHH
Confidence 5 4566655555 55788888888777665432 11 11100111 111 1223458999999
Q ss_pred HHHHHHHH
Q 010075 310 NAMIVAMV 317 (519)
Q Consensus 310 ~aii~a~~ 317 (519)
.+++.-+.
T Consensus 251 ~~~~~~~~ 258 (331)
T KOG1210|consen 251 KAIVKGMK 258 (331)
T ss_pred HHHHhHHh
Confidence 99988775
|
|
| >COG2910 Putative NADH-flavin reductase [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.64 E-value=5.4e-06 Score=75.37 Aligned_cols=196 Identities=14% Similarity=0.134 Sum_probs=124.6
Q ss_pred CEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEEec
Q 010075 13 KTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVPG 92 (519)
Q Consensus 13 k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v~g 92 (519)
|+|.|.||||-+|+.++++.+.+| ++|.+++|++..... .+.+.+++.
T Consensus 1 mKIaiIgAsG~~Gs~i~~EA~~RG---HeVTAivRn~~K~~~-----------------------------~~~~~i~q~ 48 (211)
T COG2910 1 MKIAIIGASGKAGSRILKEALKRG---HEVTAIVRNASKLAA-----------------------------RQGVTILQK 48 (211)
T ss_pred CeEEEEecCchhHHHHHHHHHhCC---CeeEEEEeChHhccc-----------------------------cccceeecc
Confidence 689999999999999999999999 677999998754321 156788999
Q ss_pred cCCCCCCCCChhhhHHHHhcCccEEEEcCccCCccccHHHHHHHhHHHHHHHHHHHHhccCCceEEEEecceeecCcCCe
Q 010075 93 DISSEDLGLKDSNLKEELWNELDIMVNSAAITKFDERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAYVAGERTGL 172 (519)
Q Consensus 93 Dl~~~~lgls~~~~~~~l~~~vdiViH~Aa~v~f~~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V~vSTa~v~~~~~~~ 172 (519)
|+.++ ......+.+.|+||..-+.... ++... .......|++..+.. ++.|++.|+.+.+.-
T Consensus 49 Difd~-------~~~a~~l~g~DaVIsA~~~~~~-~~~~~----~~k~~~~li~~l~~a-gv~RllVVGGAGSL~----- 110 (211)
T COG2910 49 DIFDL-------TSLASDLAGHDAVISAFGAGAS-DNDEL----HSKSIEALIEALKGA-GVPRLLVVGGAGSLE----- 110 (211)
T ss_pred cccCh-------hhhHhhhcCCceEEEeccCCCC-ChhHH----HHHHHHHHHHHHhhc-CCeeEEEEcCccceE-----
Confidence 99963 3234667889999976544311 11111 123366777888875 788999988876542
Q ss_pred eecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCc-HHHHHHHHHHHH--HHHhhcCC
Q 010075 173 ILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPN-TYVFTKTMGEML--MQQSKENL 249 (519)
Q Consensus 173 i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n-~Y~~sK~~aE~l--v~~~~~~l 249 (519)
++|..--.+.| .+|- -|..++..+|.+ ++. ...+
T Consensus 111 id~g~rLvD~p------------------------------------------~fP~ey~~~A~~~ae~L~~Lr~-~~~l 147 (211)
T COG2910 111 IDEGTRLVDTP------------------------------------------DFPAEYKPEALAQAEFLDSLRA-EKSL 147 (211)
T ss_pred EcCCceeecCC------------------------------------------CCchhHHHHHHHHHHHHHHHhh-ccCc
Confidence 22221100000 2233 356778888854 333 3459
Q ss_pred cEEEEecCccccCCCCCCCcccccccccHHHHHHhhcCC-ceeeccCCCceeeeeeHHHHHHHHHHHHHHh
Q 010075 250 SLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGN-LRCLVGETKVIMDVIPVDMVVNAMIVAMVAH 319 (519)
Q Consensus 250 p~~IvRPs~V~g~~~~p~~gw~~~~~~~~~~i~~~~~g~-~~~~~~~~~~~~d~vpVDdva~aii~a~~~~ 319 (519)
+++.+-|+..+-|++. .| ++. .|. ....-..|+ +.|...|-|-+++.-++++
T Consensus 148 ~WTfvSPaa~f~PGer--Tg---~yr----------lggD~ll~n~~G~---SrIS~aDYAiA~lDe~E~~ 200 (211)
T COG2910 148 DWTFVSPAAFFEPGER--TG---NYR----------LGGDQLLVNAKGE---SRISYADYAIAVLDELEKP 200 (211)
T ss_pred ceEEeCcHHhcCCccc--cC---ceE----------eccceEEEcCCCc---eeeeHHHHHHHHHHHHhcc
Confidence 9999999999888542 11 111 111 111122333 4678888888888887754
|
|
| >PRK06720 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=98.49 E-value=9.7e-07 Score=81.43 Aligned_cols=129 Identities=12% Similarity=0.095 Sum_probs=76.2
Q ss_pred cCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 010075 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (519)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (519)
+++++++||||+|+||..+++.|++.| .+|++..|+... .+...++ +++ . ..++.+
T Consensus 14 l~gk~~lVTGa~~GIG~aia~~l~~~G---~~V~l~~r~~~~---~~~~~~~---------l~~-~--------~~~~~~ 69 (169)
T PRK06720 14 LAGKVAIVTGGGIGIGRNTALLLAKQG---AKVIVTDIDQES---GQATVEE---------ITN-L--------GGEALF 69 (169)
T ss_pred cCCCEEEEecCCChHHHHHHHHHHHCC---CEEEEEECCHHH---HHHHHHH---------HHh-c--------CCcEEE
Confidence 689999999999999999999999988 578888876421 1111111 111 0 235677
Q ss_pred EeccCCCCCCCCChhhhHH---HHhcCccEEEEcCccCCc----cc-cHHHHHHHhHHHHHHHHHHHHhc----------
Q 010075 90 VPGDISSEDLGLKDSNLKE---ELWNELDIMVNSAAITKF----DE-RYDVAFGINTLGVIHLVNFAKKC---------- 151 (519)
Q Consensus 90 v~gDl~~~~lgls~~~~~~---~l~~~vdiViH~Aa~v~f----~~-~~~~~~~~Nv~gt~~ll~~a~~~---------- 151 (519)
+.+|++++... ....+ ....++|++||+||.... .+ +.+....+|+.++......+...
T Consensus 70 ~~~Dl~~~~~v---~~~v~~~~~~~G~iDilVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 146 (169)
T PRK06720 70 VSYDMEKQGDW---QRVISITLNAFSRIDMLFQNAGLYKIDSIFSRQQENDSNVLCINDVWIEIKQLTSSFMKQQEEVVL 146 (169)
T ss_pred EEccCCCHHHH---HHHHHHHHHHcCCCCEEEECCCcCCCCCcccccchhHhhceeccHHHHHHHHHHHHHHhcCCEEEe
Confidence 89999863210 11111 123469999999997542 22 21122244555543333322211
Q ss_pred cCCceEEEEeccee
Q 010075 152 VKLKVFVHVSTAYV 165 (519)
Q Consensus 152 ~~l~~~V~vSTa~v 165 (519)
....+|..|||...
T Consensus 147 ~~~~~~~~~~~~~~ 160 (169)
T PRK06720 147 SDLPIFGIIGTKGQ 160 (169)
T ss_pred ecCceeeEeccccc
Confidence 13467888888654
|
|
| >KOG1014 consensus 17 beta-hydroxysteroid dehydrogenase type 3, HSD17B3 [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.43 E-value=4.4e-06 Score=82.26 Aligned_cols=170 Identities=15% Similarity=0.175 Sum_probs=114.2
Q ss_pred CEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEEec
Q 010075 13 KTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVPG 92 (519)
Q Consensus 13 k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v~g 92 (519)
+=..|||||..|||..+++|.++| -+|+++.|+.+. ++++.+|+.+. ..-.+..+..
T Consensus 50 ~WAVVTGaTDGIGKayA~eLAkrG---~nvvLIsRt~~K---L~~v~kEI~~~-----------------~~vev~~i~~ 106 (312)
T KOG1014|consen 50 SWAVVTGATDGIGKAYARELAKRG---FNVVLISRTQEK---LEAVAKEIEEK-----------------YKVEVRIIAI 106 (312)
T ss_pred CEEEEECCCCcchHHHHHHHHHcC---CEEEEEeCCHHH---HHHHHHHHHHH-----------------hCcEEEEEEE
Confidence 678999999999999999999999 568999998643 34444444321 1245788999
Q ss_pred cCCCCCCCCChhhhHHHHhc--CccEEEEcCccCC-----cc----ccHHHHHHHhHHHHHHHHHHHHh-c--cCCceEE
Q 010075 93 DISSEDLGLKDSNLKEELWN--ELDIMVNSAAITK-----FD----ERYDVAFGINTLGVIHLVNFAKK-C--VKLKVFV 158 (519)
Q Consensus 93 Dl~~~~lgls~~~~~~~l~~--~vdiViH~Aa~v~-----f~----~~~~~~~~~Nv~gt~~ll~~a~~-~--~~l~~~V 158 (519)
|.++++- .-+.....+. ++.++||++|... |. ..+...+.+|+.++..+.+.... | ++-..+|
T Consensus 107 Dft~~~~---~ye~i~~~l~~~~VgILVNNvG~~~~~P~~f~~~~~~~~~~ii~vN~~~~~~~t~~ilp~M~~r~~G~Iv 183 (312)
T KOG1014|consen 107 DFTKGDE---VYEKLLEKLAGLDVGILVNNVGMSYDYPESFLKYPEGELQNIINVNILSVTLLTQLILPGMVERKKGIIV 183 (312)
T ss_pred ecCCCch---hHHHHHHHhcCCceEEEEecccccCCCcHHHHhCchhhhhheeEEecchHHHHHHHhhhhhhcCCCceEE
Confidence 9998642 1122223333 4779999999864 11 13455577899987777666532 1 2445789
Q ss_pred EEecceeecCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcHHHHHHHHH
Q 010075 159 HVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMG 238 (519)
Q Consensus 159 ~vSTa~v~~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~Y~~sK~~a 238 (519)
++||....-.. +.-..|+.||+..
T Consensus 184 nigS~ag~~p~--------------------------------------------------------p~~s~ysasK~~v 207 (312)
T KOG1014|consen 184 NIGSFAGLIPT--------------------------------------------------------PLLSVYSASKAFV 207 (312)
T ss_pred EeccccccccC--------------------------------------------------------hhHHHHHHHHHHH
Confidence 99987432110 1135699999866
Q ss_pred HHHHH----Hh-hcCCcEEEEecCccccCCC
Q 010075 239 EMLMQ----QS-KENLSLVIIRPTVVSGTYK 264 (519)
Q Consensus 239 E~lv~----~~-~~~lp~~IvRPs~V~g~~~ 264 (519)
+.+.. ++ ..++.+-.+-|..|.+...
T Consensus 208 ~~~S~~L~~Ey~~~gI~Vq~v~p~~VaTkm~ 238 (312)
T KOG1014|consen 208 DFFSRCLQKEYESKGIFVQSVIPYLVATKMA 238 (312)
T ss_pred HHHHHHHHHHHHhcCeEEEEeehhheecccc
Confidence 65543 44 5689999999998887654
|
|
| >KOG1204 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=98.29 E-value=1.4e-06 Score=81.66 Aligned_cols=164 Identities=19% Similarity=0.201 Sum_probs=104.4
Q ss_pred CCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEE
Q 010075 11 ENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFV 90 (519)
Q Consensus 11 ~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v 90 (519)
.++.+|+||++-.||..++..++..+.+. .+++..|.... .+.+...
T Consensus 5 ~r~villTGaSrgiG~~~v~~i~aed~e~-~r~g~~r~~a~--------------------------------~~~L~v~ 51 (253)
T KOG1204|consen 5 MRKVILLTGASRGIGTGSVATILAEDDEA-LRYGVARLLAE--------------------------------LEGLKVA 51 (253)
T ss_pred cceEEEEecCCCCccHHHHHHHHhcchHH-HHHhhhccccc--------------------------------ccceEEE
Confidence 36789999999999999999888876543 22222222211 1233333
Q ss_pred eccCCCCCCCCC-hhhhHHHHh-------cCccEEEEcCccCC-----c-----cccHHHHHHHhHHHHHHHHHHHHhc-
Q 010075 91 PGDISSEDLGLK-DSNLKEELW-------NELDIMVNSAAITK-----F-----DERYDVAFGINTLGVIHLVNFAKKC- 151 (519)
Q Consensus 91 ~gDl~~~~lgls-~~~~~~~l~-------~~vdiViH~Aa~v~-----f-----~~~~~~~~~~Nv~gt~~ll~~a~~~- 151 (519)
.||.....-|.- .......+. .+-|+|||+||... + .+.++..+++|+.+...|...+.+.
T Consensus 52 ~gd~~v~~~g~~~e~~~l~al~e~~r~k~gkr~iiI~NAG~lgdvsk~~~~~~D~~qw~ky~~~NlfS~VsL~~~~l~~l 131 (253)
T KOG1204|consen 52 YGDDFVHVVGDITEEQLLGALREAPRKKGGKRDIIIHNAGSLGDVSKGAVDLGDSDQWKKYWDLNLFSMVSLVQWALPKL 131 (253)
T ss_pred ecCCcceechHHHHHHHHHHHHhhhhhcCCceeEEEecCCCccchhhccCCcccHHHHHHHHHhhhhhHHhhHHHHHHHh
Confidence 333322111110 222112222 25899999999863 2 2568899999999998888776542
Q ss_pred cC---CceEEEEecceeecCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCC
Q 010075 152 VK---LKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWP 228 (519)
Q Consensus 152 ~~---l~~~V~vSTa~v~~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~ 228 (519)
++ -+.+|++||..+.-. | ..-
T Consensus 132 k~~p~~~~vVnvSS~aav~p---------~-----------------------------------------------~~w 155 (253)
T KOG1204|consen 132 KKSPVNGNVVNVSSLAAVRP---------F-----------------------------------------------SSW 155 (253)
T ss_pred cCCCccCeEEEecchhhhcc---------c-----------------------------------------------cHH
Confidence 22 267899999765432 1 112
Q ss_pred cHHHHHHHHHHHHHHHh---hc-CCcEEEEecCccccCC
Q 010075 229 NTYVFTKTMGEMLMQQS---KE-NLSLVIIRPTVVSGTY 263 (519)
Q Consensus 229 n~Y~~sK~~aE~lv~~~---~~-~lp~~IvRPs~V~g~~ 263 (519)
..|+.+|++-+++.+.. .+ ++.+.-++||.|=...
T Consensus 156 a~yc~~KaAr~m~f~~lA~EEp~~v~vl~~aPGvvDT~m 194 (253)
T KOG1204|consen 156 AAYCSSKAARNMYFMVLASEEPFDVRVLNYAPGVVDTQM 194 (253)
T ss_pred HHhhhhHHHHHHHHHHHhhcCccceeEEEccCCcccchh
Confidence 46999999999988755 33 7788999999885543
|
|
| >KOG3019 consensus Predicted nucleoside-diphosphate sugar epimerase [Nucleotide transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.28 E-value=1.2e-05 Score=75.36 Aligned_cols=216 Identities=15% Similarity=0.129 Sum_probs=122.1
Q ss_pred CCEEEEeCCccHHHHHHHHHHHHhCC------CccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCC
Q 010075 12 NKTILVSGVTGFVAKVFIEKILRVQP------NVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISE 85 (519)
Q Consensus 12 ~k~VlITGaTGFlG~~Lv~~LL~~g~------~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~ 85 (519)
++..++-+++|+++..|......+.. +-+.|.++.|++...
T Consensus 12 sr~a~~~~~~g~i~~nl~~~~~~~H~t~~~~a~~h~vtv~sR~pg~~--------------------------------- 58 (315)
T KOG3019|consen 12 SRDAVSNWSNGIIRENLGSETSCCHDTNVHSADNHAVTVLSRSPGKA--------------------------------- 58 (315)
T ss_pred cccCCCCccccchhccccCcccccccCCCCcccccceEEEecCCCCc---------------------------------
Confidence 45678889999999888764443210 115688888887543
Q ss_pred ceEEEeccCCCCCCCCChhhhHHHHhcCccEEEEcCccCCc--cccHHHHHHHhHHH-----HHHHHHHHHhccCC-ceE
Q 010075 86 KITFVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF--DERYDVAFGINTLG-----VIHLVNFAKKCVKL-KVF 157 (519)
Q Consensus 86 ~v~~v~gDl~~~~lgls~~~~~~~l~~~vdiViH~Aa~v~f--~~~~~~~~~~Nv~g-----t~~ll~~a~~~~~l-~~~ 157 (519)
++++-+-|.. |+ ..+++.+++.++.... ...+...++-||.| |..|.++....+.. +.+
T Consensus 59 ritw~el~~~----Gi---------p~sc~a~vna~g~n~l~P~rRWsp~fqkev~gSRi~~t~~la~aI~~aPq~~~~~ 125 (315)
T KOG3019|consen 59 RITWPELDFP----GI---------PISCVAGVNAVGNNALLPIRRWSPEFQKEVKGSRIRVTSKLADAINNAPQEARPT 125 (315)
T ss_pred ccccchhcCC----CC---------ceehHHHHhhhhhhccCchhhcCHHHHHHhhcceeeHHHHHHHHHhcCCCCCCCe
Confidence 2333333322 11 1123333333333211 12334445555554 67778887776654 589
Q ss_pred EEEecceeecCcCCeeecccCCCCCCC-ChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcHHHHHHH
Q 010075 158 VHVSTAYVAGERTGLILENPLDGASGL-DFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKT 236 (519)
Q Consensus 158 V~vSTa~v~~~~~~~i~E~~~~e~~~~-d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~Y~~sK~ 236 (519)
|.+|...+|-... .+.|+|+.+. +.+-...+ .+||
T Consensus 126 Vlv~gva~y~pS~----s~eY~e~~~~qgfd~~srL----------------------------------------~l~W 161 (315)
T KOG3019|consen 126 VLVSGVAVYVPSE----SQEYSEKIVHQGFDILSRL----------------------------------------CLEW 161 (315)
T ss_pred EEEEeeEEecccc----ccccccccccCChHHHHHH----------------------------------------HHHH
Confidence 9999998886543 1234332221 11111111 1233
Q ss_pred HHHHHHHHhhcCCcEEEEecCccccCCCCCCCcccccccccHHHHHHhhcCCceeeccCCCceeeeeeHHHHHHHHHHHH
Q 010075 237 MGEMLMQQSKENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMIVAM 316 (519)
Q Consensus 237 ~aE~lv~~~~~~lp~~IvRPs~V~g~~~~p~~gw~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~d~vpVDdva~aii~a~ 316 (519)
.+ .......+..++++|.|.|.|.....+ .. .-+...++.|-. .|+|++...|||+||+++.+..++
T Consensus 162 E~--aA~~~~~~~r~~~iR~GvVlG~gGGa~----~~----M~lpF~~g~GGP---lGsG~Q~fpWIHv~DL~~li~~al 228 (315)
T KOG3019|consen 162 EG--AALKANKDVRVALIRIGVVLGKGGGAL----AM----MILPFQMGAGGP---LGSGQQWFPWIHVDDLVNLIYEAL 228 (315)
T ss_pred HH--HhhccCcceeEEEEEEeEEEecCCcch----hh----hhhhhhhccCCc---CCCCCeeeeeeehHHHHHHHHHHH
Confidence 22 222224568999999999999865211 11 011122333322 489999999999999999999999
Q ss_pred HHhccCCCCCcEEEecCC
Q 010075 317 VAHAKQPSDANIYHVGSS 334 (519)
Q Consensus 317 ~~~~~~~~~~~iyni~s~ 334 (519)
++..- ..+.|-+.+
T Consensus 229 e~~~v----~GViNgvAP 242 (315)
T KOG3019|consen 229 ENPSV----KGVINGVAP 242 (315)
T ss_pred hcCCC----CceecccCC
Confidence 75432 347777766
|
|
| >PRK08309 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.23 E-value=3e-06 Score=78.68 Aligned_cols=102 Identities=17% Similarity=0.104 Sum_probs=68.2
Q ss_pred CEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEEec
Q 010075 13 KTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVPG 92 (519)
Q Consensus 13 k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v~g 92 (519)
|+++|||||||+|. +++.|++.| .+|.++.|++.. .+.+. ...+. ..++.++.+
T Consensus 1 m~vlVtGGtG~gg~-la~~L~~~G---~~V~v~~R~~~~---~~~l~-------------~~l~~------~~~i~~~~~ 54 (177)
T PRK08309 1 MHALVIGGTGMLKR-VSLWLCEKG---FHVSVIARREVK---LENVK-------------RESTT------PESITPLPL 54 (177)
T ss_pred CEEEEECcCHHHHH-HHHHHHHCc---CEEEEEECCHHH---HHHHH-------------HHhhc------CCcEEEEEc
Confidence 57999999999886 999999988 577888886421 11111 00110 246788999
Q ss_pred cCCCCCCCCChhhhHHHHh-------cCccEEEEcCccCCccccHHHHHHHhHHHHHHHHHHHHhccCCc----eEEEEe
Q 010075 93 DISSEDLGLKDSNLKEELW-------NELDIMVNSAAITKFDERYDVAFGINTLGVIHLVNFAKKCVKLK----VFVHVS 161 (519)
Q Consensus 93 Dl~~~~lgls~~~~~~~l~-------~~vdiViH~Aa~v~f~~~~~~~~~~Nv~gt~~ll~~a~~~~~l~----~~V~vS 161 (519)
|++++ .+ ...++ ..+|++|+.+ .+.++.++.++|++. +++ +|+|+=
T Consensus 55 Dv~d~------~s-v~~~i~~~l~~~g~id~lv~~v---------------h~~~~~~~~~~~~~~-gv~~~~~~~~h~~ 111 (177)
T PRK08309 55 DYHDD------DA-LKLAIKSTIEKNGPFDLAVAWI---------------HSSAKDALSVVCREL-DGSSETYRLFHVL 111 (177)
T ss_pred cCCCH------HH-HHHHHHHHHHHcCCCeEEEEec---------------cccchhhHHHHHHHH-ccCCCCceEEEEe
Confidence 99963 22 22322 3467777553 345788899999997 777 888875
Q ss_pred cc
Q 010075 162 TA 163 (519)
Q Consensus 162 Ta 163 (519)
..
T Consensus 112 gs 113 (177)
T PRK08309 112 GS 113 (177)
T ss_pred CC
Confidence 33
|
|
| >PLN00106 malate dehydrogenase | Back alignment and domain information |
|---|
Probab=98.18 E-value=7.1e-06 Score=83.28 Aligned_cols=184 Identities=18% Similarity=0.087 Sum_probs=113.3
Q ss_pred CCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEEe
Q 010075 12 NKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVP 91 (519)
Q Consensus 12 ~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v~ 91 (519)
.++|.||||+|.+|+.++..|...+ -..++.++.+...... ...|. +. .... ..
T Consensus 18 ~~KV~IiGaaG~VG~~~a~~l~~~~-~~~el~L~Di~~~~g~-a~Dl~----~~------------------~~~~--~i 71 (323)
T PLN00106 18 GFKVAVLGAAGGIGQPLSLLMKMNP-LVSELHLYDIANTPGV-AADVS----HI------------------NTPA--QV 71 (323)
T ss_pred CCEEEEECCCCHHHHHHHHHHHhCC-CCCEEEEEecCCCCee-Echhh----hC------------------CcCc--eE
Confidence 3689999999999999999888643 3367888877651110 00111 00 0111 12
Q ss_pred ccCCCCCCCCChhhhHHHHhcCccEEEEcCccCCc-cccHHHHHHHhHHHHHHHHHHHHhccCCceEEEEecceeecCcC
Q 010075 92 GDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF-DERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAYVAGERT 170 (519)
Q Consensus 92 gDl~~~~lgls~~~~~~~l~~~vdiViH~Aa~v~f-~~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V~vSTa~v~~~~~ 170 (519)
.+++. +.+. ...+.+.|+|||+||..+- ..+....+..|+..++++.+.+++. +.++++.++|-=+.+...
T Consensus 72 ~~~~~------~~d~-~~~l~~aDiVVitAG~~~~~g~~R~dll~~N~~i~~~i~~~i~~~-~p~aivivvSNPvD~~~~ 143 (323)
T PLN00106 72 RGFLG------DDQL-GDALKGADLVIIPAGVPRKPGMTRDDLFNINAGIVKTLCEAVAKH-CPNALVNIISNPVNSTVP 143 (323)
T ss_pred EEEeC------CCCH-HHHcCCCCEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH-CCCeEEEEeCCCccccHH
Confidence 23221 2233 3667899999999998654 4678888999999999999999997 788899888853321100
Q ss_pred CeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcHHHHHHHHHHHHHHHh--hcC
Q 010075 171 GLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLMQQS--KEN 248 (519)
Q Consensus 171 ~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~Y~~sK~~aE~lv~~~--~~~ 248 (519)
.... . + .+.. ..++.+.|+.++...+++-... ..+
T Consensus 144 ---------------i~t~--~----~----------------~~~s------~~p~~~viG~~~LDs~Rl~~~lA~~lg 180 (323)
T PLN00106 144 ---------------IAAE--V----L----------------KKAG------VYDPKKLFGVTTLDVVRANTFVAEKKG 180 (323)
T ss_pred ---------------HHHH--H----H----------------HHcC------CCCcceEEEEecchHHHHHHHHHHHhC
Confidence 0000 0 0 0001 1134456787887777766554 456
Q ss_pred CcEEEEecCccccCCC-CCCCcccc
Q 010075 249 LSLVIIRPTVVSGTYK-EPFPGWVE 272 (519)
Q Consensus 249 lp~~IvRPs~V~g~~~-~p~~gw~~ 272 (519)
++..-++-.++.+.+. .-+|-|..
T Consensus 181 v~~~~V~~~ViGeHg~~s~vp~~S~ 205 (323)
T PLN00106 181 LDPADVDVPVVGGHAGITILPLLSQ 205 (323)
T ss_pred CChhheEEEEEEeCCCccEeeehhc
Confidence 7777776655555534 45566654
|
|
| >PRK09620 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=98.17 E-value=3.5e-06 Score=81.47 Aligned_cols=83 Identities=11% Similarity=0.179 Sum_probs=53.2
Q ss_pred cCCCEEEEeCCc----------------cHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHh
Q 010075 10 LENKTILVSGVT----------------GFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKE 73 (519)
Q Consensus 10 ~~~k~VlITGaT----------------GFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~ 73 (519)
++||+||||+|. ||+|++|++.|++.| .+|+++.+....... .+
T Consensus 1 l~gk~vlITaG~T~E~iD~VR~itN~SSGfiGs~LA~~L~~~G---a~V~li~g~~~~~~~--~~--------------- 60 (229)
T PRK09620 1 MKGKKVLITSGGCLEKWDQVRGHTNMAKGTIGRIIAEELISKG---AHVIYLHGYFAEKPN--DI--------------- 60 (229)
T ss_pred CCCCEEEEeCCCccCCcCCeeEecCCCcCHHHHHHHHHHHHCC---CeEEEEeCCCcCCCc--cc---------------
Confidence 479999999875 999999999999999 466766654221100 00
Q ss_pred hhccccccccCCceEEEeccCCCCCCCCChhhhHHHHhc--CccEEEEcCccCCcc
Q 010075 74 KWGTRLNSFISEKITFVPGDISSEDLGLKDSNLKEELWN--ELDIMVNSAAITKFD 127 (519)
Q Consensus 74 ~~~~~~~~~~~~~v~~v~gDl~~~~lgls~~~~~~~l~~--~vdiViH~Aa~v~f~ 127 (519)
+ ...++..+.+|.. ..+....++. ++|+|||+||...|.
T Consensus 61 --~------~~~~~~~V~s~~d-------~~~~l~~~~~~~~~D~VIH~AAvsD~~ 101 (229)
T PRK09620 61 --N------NQLELHPFEGIID-------LQDKMKSIITHEKVDAVIMAAAGSDWV 101 (229)
T ss_pred --C------CceeEEEEecHHH-------HHHHHHHHhcccCCCEEEECcccccee
Confidence 0 0123445666333 1122334453 689999999997764
|
|
| >KOG1199 consensus Short-chain alcohol dehydrogenase/3-hydroxyacyl-CoA dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=98.08 E-value=2.2e-06 Score=76.75 Aligned_cols=124 Identities=23% Similarity=0.342 Sum_probs=87.1
Q ss_pred cCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCccc-HHHHHHHHHhhhhhHHHHHhhhccccccccCCceE
Q 010075 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDS-AALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKIT 88 (519)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~-~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~ 88 (519)
.+|...+||||...+|+.-+|+|...| ..|.++.-+.++-. .... +..++.
T Consensus 7 ~kglvalvtggasglg~ataerlakqg---asv~lldlp~skg~~vake-------------------------lg~~~v 58 (260)
T KOG1199|consen 7 TKGLVALVTGGASGLGKATAERLAKQG---ASVALLDLPQSKGADVAKE-------------------------LGGKVV 58 (260)
T ss_pred hcCeeEEeecCcccccHHHHHHHHhcC---ceEEEEeCCcccchHHHHH-------------------------hCCceE
Confidence 467889999999999999999999998 56677776654332 2111 247899
Q ss_pred EEeccCCCCCCCCChhhhHHHH------hcCccEEEEcCccCC------c-------cccHHHHHHHhHHHHHHHHHHHH
Q 010075 89 FVPGDISSEDLGLKDSNLKEEL------WNELDIMVNSAAITK------F-------DERYDVAFGINTLGVIHLVNFAK 149 (519)
Q Consensus 89 ~v~gDl~~~~lgls~~~~~~~l------~~~vdiViH~Aa~v~------f-------~~~~~~~~~~Nv~gt~~ll~~a~ 149 (519)
+...|+++ +.|....+ +.++|..+|||+..- + -+++...+++|+.||.+++++..
T Consensus 59 f~padvts------ekdv~aala~ak~kfgrld~~vncagia~a~ktyn~~k~~~h~ledfqrvidvn~~gtfnvirl~a 132 (260)
T KOG1199|consen 59 FTPADVTS------EKDVRAALAKAKAKFGRLDALVNCAGIAYAFKTYNVQKKKHHDLEDFQRVIDVNVLGTFNVIRLGA 132 (260)
T ss_pred EeccccCc------HHHHHHHHHHHHhhccceeeeeeccceeeeeeeeeecccccccHHHhhheeeeeeeeeeeeeeehh
Confidence 99999996 44433222 347999999999741 1 14566668899999999988754
Q ss_pred h-c------cCCceEEEEecceeec
Q 010075 150 K-C------VKLKVFVHVSTAYVAG 167 (519)
Q Consensus 150 ~-~------~~l~~~V~vSTa~v~~ 167 (519)
. | .+-++=|.+-|+.|..
T Consensus 133 glmg~nepdq~gqrgviintasvaa 157 (260)
T KOG1199|consen 133 GLMGENEPDQNGQRGVIINTASVAA 157 (260)
T ss_pred hhhcCCCCCCCCcceEEEeeceeee
Confidence 2 2 1334556666666543
|
|
| >PTZ00325 malate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.03 E-value=5.7e-05 Score=76.65 Aligned_cols=124 Identities=15% Similarity=0.108 Sum_probs=85.5
Q ss_pred cCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 010075 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (519)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (519)
.+.++|.||||+|.+|+.++..|...+ ...++.++.+.+..... ..+. +. ... .
T Consensus 6 ~~~~KI~IiGaaG~VGs~~a~~l~~~~-~~~elvL~Di~~~~g~a-~Dl~---------------------~~-~~~--~ 59 (321)
T PTZ00325 6 LKMFKVAVLGAAGGIGQPLSLLLKQNP-HVSELSLYDIVGAPGVA-ADLS---------------------HI-DTP--A 59 (321)
T ss_pred CCCCEEEEECCCCHHHHHHHHHHhcCC-CCCEEEEEecCCCcccc-cchh---------------------hc-CcC--c
Confidence 456799999999999999999887543 33678888773211111 0111 00 011 1
Q ss_pred EeccCCCCCCCCChhhhHHHHhcCccEEEEcCccCCc-cccHHHHHHHhHHHHHHHHHHHHhccCCceEEEEecceeec
Q 010075 90 VPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF-DERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAYVAG 167 (519)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~~~vdiViH~Aa~v~f-~~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V~vSTa~v~~ 167 (519)
...+.+++ .+.. +.+.+.|+|||+||...- ..+....+..|+.+++++++.+++. +.+++|.++|..+..
T Consensus 60 ~v~~~td~------~~~~-~~l~gaDvVVitaG~~~~~~~tR~dll~~N~~i~~~i~~~i~~~-~~~~iviv~SNPvdv 130 (321)
T PTZ00325 60 KVTGYADG------ELWE-KALRGADLVLICAGVPRKPGMTRDDLFNTNAPIVRDLVAAVASS-APKAIVGIVSNPVNS 130 (321)
T ss_pred eEEEecCC------CchH-HHhCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH-CCCeEEEEecCcHHH
Confidence 22344421 2212 566799999999998653 4567888999999999999999997 899999999976644
|
|
| >cd01336 MDH_cytoplasmic_cytosolic Cytoplasmic and cytosolic Malate dehydrogenases | Back alignment and domain information |
|---|
Probab=98.01 E-value=7e-05 Score=76.43 Aligned_cols=109 Identities=14% Similarity=0.133 Sum_probs=69.6
Q ss_pred CEEEEeCCccHHHHHHHHHHHHhCC----CccEEEEEEecCCcccHH-HHHHHHHhhhhhHHHHHhhhccccccccCCce
Q 010075 13 KTILVSGVTGFVAKVFIEKILRVQP----NVKKLYLFVRAADIDSAA-LRFQNEVLAKDVFNVLKEKWGTRLNSFISEKI 87 (519)
Q Consensus 13 k~VlITGaTGFlG~~Lv~~LL~~g~----~v~~V~~LvR~~~~~~~~-~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v 87 (519)
.+|+||||+|++|++++..|+..+- .-.+|.++.|+....... +.+ ++ .+-.
T Consensus 3 ~kV~I~GAaG~VG~~la~~L~~~~~~~~~~~~el~L~D~~~~~~~~~g~~~--Dl---------------------~d~~ 59 (325)
T cd01336 3 IRVLVTGAAGQIAYSLLPMIAKGDVFGPDQPVILHLLDIPPALKALEGVVM--EL---------------------QDCA 59 (325)
T ss_pred eEEEEECCCCHHHHHHHHHHHhCcccCCCCCcEEEEEEcCCccccccceee--eh---------------------hhcc
Confidence 4799999999999999999987431 113788888865321000 000 00 0000
Q ss_pred EEEeccCCCCCCCCChhhhHHHHhcCccEEEEcCccCCc-cccHHHHHHHhHHHHHHHHHHHHhc
Q 010075 88 TFVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF-DERYDVAFGINTLGVIHLVNFAKKC 151 (519)
Q Consensus 88 ~~v~gDl~~~~lgls~~~~~~~l~~~vdiViH~Aa~v~f-~~~~~~~~~~Nv~gt~~ll~~a~~~ 151 (519)
.+..+|+.. ..+. .+.++++|+|||+||..+- .++....++.|+.-.+.+.+..++.
T Consensus 60 ~~~~~~~~~------~~~~-~~~l~~aDiVI~tAG~~~~~~~~R~~l~~~N~~i~~~i~~~i~~~ 117 (325)
T cd01336 60 FPLLKSVVA------TTDP-EEAFKDVDVAILVGAMPRKEGMERKDLLKANVKIFKEQGEALDKY 117 (325)
T ss_pred ccccCCcee------cCCH-HHHhCCCCEEEEeCCcCCCCCCCHHHHHHHHHHHHHHHHHHHHHh
Confidence 012223321 1222 2556789999999998754 4566788999999999998887776
|
MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are eukaryotic MDHs localized to the cytoplasm and cytosol. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others. |
| >PRK13656 trans-2-enoyl-CoA reductase; Provisional | Back alignment and domain information |
|---|
Probab=97.96 E-value=0.00018 Score=74.04 Aligned_cols=92 Identities=15% Similarity=0.096 Sum_probs=54.5
Q ss_pred CCCEEEEeCCccHHHHH--HHHHHHHhCCCccEEEEEEecCCccc---------HHHHHHHHHhhhhhHHHHHhhhcccc
Q 010075 11 ENKTILVSGVTGFVAKV--FIEKILRVQPNVKKLYLFVRAADIDS---------AALRFQNEVLAKDVFNVLKEKWGTRL 79 (519)
Q Consensus 11 ~~k~VlITGaTGFlG~~--Lv~~LL~~g~~v~~V~~LvR~~~~~~---------~~~rl~~~~~~~~~f~~l~~~~~~~~ 79 (519)
.||++|||||++.+|.+ +++.| +.| ..|+++.+.+.... ..+.+. ...++.
T Consensus 40 ggK~aLVTGaSsGIGlA~~IA~al-~~G---A~Vi~v~~~~~~~~~~~~tagwy~~~a~~----------~~a~~~---- 101 (398)
T PRK13656 40 GPKKVLVIGASSGYGLASRIAAAF-GAG---ADTLGVFFEKPGTEKKTGTAGWYNSAAFD----------KFAKAA---- 101 (398)
T ss_pred CCCEEEEECCCchHhHHHHHHHHH-HcC---CeEEEEecCcchhhhcccccccchHHHHH----------HHHHhc----
Confidence 46999999999999999 89999 888 56667765331111 011111 111111
Q ss_pred ccccCCceEEEeccCCCCCCCCChhhhHHHHhcCccEEEEcCccC
Q 010075 80 NSFISEKITFVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAIT 124 (519)
Q Consensus 80 ~~~~~~~v~~v~gDl~~~~lgls~~~~~~~l~~~vdiViH~Aa~v 124 (519)
...+..+.+|+++++.--...+...+...++|++||++|..
T Consensus 102 ----G~~a~~i~~DVss~E~v~~lie~I~e~~G~IDiLVnSaA~~ 142 (398)
T PRK13656 102 ----GLYAKSINGDAFSDEIKQKVIELIKQDLGQVDLVVYSLASP 142 (398)
T ss_pred ----CCceEEEEcCCCCHHHHHHHHHHHHHhcCCCCEEEECCccC
Confidence 13467789999964310000111111234699999999986
|
|
| >KOG1478 consensus 3-keto sterol reductase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=97.95 E-value=8.1e-05 Score=70.98 Aligned_cols=189 Identities=15% Similarity=0.186 Sum_probs=115.4
Q ss_pred CCEEEEeCCccHHHHHHHHHHHHhCCC--ccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 010075 12 NKTILVSGVTGFVAKVFIEKILRVQPN--VKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (519)
Q Consensus 12 ~k~VlITGaTGFlG~~Lv~~LL~~g~~--v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (519)
.|.++|||++..+|-+++.+|++...+ +-.+.+..|+....+ ... .++++-+|.. ..++++
T Consensus 3 RKvalITGanSglGl~i~~RLl~~~De~~~ltl~ltcR~~~kae---~vc---------~~lk~f~p~~-----~i~~~y 65 (341)
T KOG1478|consen 3 RKVALITGANSGLGLAICKRLLAEDDENVRLTLCLTCRNMSKAE---AVC---------AALKAFHPKS-----TIEVTY 65 (341)
T ss_pred ceEEEEecCCCcccHHHHHHHHhccCCceeEEEEEEeCChhHHH---HHH---------HHHHHhCCCc-----eeEEEE
Confidence 478999999999999999999987644 235566667654321 111 1233333321 256889
Q ss_pred EeccCCCCCCCCChhhhHHHHhcCccEEEEcCccCCcc----------------------------------ccHHHHHH
Q 010075 90 VPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKFD----------------------------------ERYDVAFG 135 (519)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~~~vdiViH~Aa~v~f~----------------------------------~~~~~~~~ 135 (519)
+..|+++-...+.....+..-..+.|.|+-+||...++ +.+...++
T Consensus 66 vlvD~sNm~Sv~~A~~di~~rf~~ld~iylNAg~~~~~gi~w~~avf~~fsnpv~amt~pt~~~~t~G~is~D~lg~iFe 145 (341)
T KOG1478|consen 66 VLVDVSNMQSVFRASKDIKQRFQRLDYIYLNAGIMPNPGINWKAAVFGLFSNPVIAMTSPTEGLLTQGKISADGLGEIFE 145 (341)
T ss_pred EEEehhhHHHHHHHHHHHHHHhhhccEEEEccccCCCCcccHHHHHHHHhhchhHHhcCchhhhhhcceecccchhhHhh
Confidence 99999975433323333334456799999999986431 45566789
Q ss_pred HhHHHHHHHHHHHHhc---cCCceEEEEecceeecCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHH
Q 010075 136 INTLGVIHLVNFAKKC---VKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITL 212 (519)
Q Consensus 136 ~Nv~gt~~ll~~a~~~---~~l~~~V~vSTa~v~~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~ 212 (519)
+||.|..-+++-.... ..-..+|.+||..+--. .++. ++++.
T Consensus 146 tnVFGhfyli~~l~pll~~~~~~~lvwtSS~~a~kk--------------~lsl---------------------eD~q~ 190 (341)
T KOG1478|consen 146 TNVFGHFYLIRELEPLLCHSDNPQLVWTSSRMARKK--------------NLSL---------------------EDFQH 190 (341)
T ss_pred hcccchhhhHhhhhhHhhcCCCCeEEEEeecccccc--------------cCCH---------------------HHHhh
Confidence 9999977665543221 12237899988643211 1111 11111
Q ss_pred HHhhccccccccCCCCcHHHHHHHHHHHHHHHh-h----cCCcEEEEecCccccCCC
Q 010075 213 FMKNLGTERAKLHGWPNTYVFTKTMGEMLMQQS-K----ENLSLVIIRPTVVSGTYK 264 (519)
Q Consensus 213 ~~~~lg~~~~~~~~~~n~Y~~sK~~aE~lv~~~-~----~~lp~~IvRPs~V~g~~~ 264 (519)
..--.+|.-||.+.+-+-... + .|+.--++-||+-....-
T Consensus 191 ------------~kg~~pY~sSKrl~DlLh~A~~~~~~~~g~~qyvv~pg~~tt~~~ 235 (341)
T KOG1478|consen 191 ------------SKGKEPYSSSKRLTDLLHVALNRNFKPLGINQYVVQPGIFTTNSF 235 (341)
T ss_pred ------------hcCCCCcchhHHHHHHHHHHHhccccccchhhhcccCceeecchh
Confidence 123457999999998775443 2 245566778887666543
|
|
| >PRK06732 phosphopantothenate--cysteine ligase; Validated | Back alignment and domain information |
|---|
Probab=97.88 E-value=6.6e-05 Score=72.72 Aligned_cols=99 Identities=14% Similarity=0.159 Sum_probs=58.0
Q ss_pred EEEe-CCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEEecc
Q 010075 15 ILVS-GVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVPGD 93 (519)
Q Consensus 15 VlIT-GaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v~gD 93 (519)
-+|| .+|||+|.+|++.|++.| .+|+++.|+..... ....++.++..+
T Consensus 18 R~itN~SSG~iG~aLA~~L~~~G---~~V~li~r~~~~~~----------------------------~~~~~v~~i~v~ 66 (229)
T PRK06732 18 RGITNHSTGQLGKIIAETFLAAG---HEVTLVTTKTAVKP----------------------------EPHPNLSIIEIE 66 (229)
T ss_pred eeecCccchHHHHHHHHHHHhCC---CEEEEEECcccccC----------------------------CCCCCeEEEEEe
Confidence 3444 468999999999999999 67788877532110 001345555543
Q ss_pred CCCCCCCCChhhhHHHHhcCccEEEEcCccCCccccHHHHHHHhHHHHHHHHHHHHh
Q 010075 94 ISSEDLGLKDSNLKEELWNELDIMVNSAAITKFDERYDVAFGINTLGVIHLVNFAKK 150 (519)
Q Consensus 94 l~~~~lgls~~~~~~~l~~~vdiViH~Aa~v~f~~~~~~~~~~Nv~gt~~ll~~a~~ 150 (519)
-.+. ..+......+++|+|||+||...+.. ....-..+...+.++.+++++
T Consensus 67 s~~~-----m~~~l~~~~~~~DivIh~AAvsd~~~-~~~~~~~~~~~~~~v~~~~~~ 117 (229)
T PRK06732 67 NVDD-----LLETLEPLVKDHDVLIHSMAVSDYTP-VYMTDLEEVSASDNLNEFLTK 117 (229)
T ss_pred cHHH-----HHHHHHHHhcCCCEEEeCCccCCcee-hhhhhhhhhhhhhhhhhhhcc
Confidence 3210 11222345568999999999876532 222223345555566666654
|
|
| >PRK14982 acyl-ACP reductase; Provisional | Back alignment and domain information |
|---|
Probab=97.74 E-value=9.7e-05 Score=75.25 Aligned_cols=39 Identities=26% Similarity=0.273 Sum_probs=33.2
Q ss_pred hcCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEec
Q 010075 9 FLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRA 48 (519)
Q Consensus 9 ~~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~ 48 (519)
.+++++|+||||||++|+.+++.|+..+ ++.+|+++.|+
T Consensus 152 ~l~~k~VLVtGAtG~IGs~lar~L~~~~-gv~~lilv~R~ 190 (340)
T PRK14982 152 DLSKATVAVVGATGDIGSAVCRWLDAKT-GVAELLLVARQ 190 (340)
T ss_pred CcCCCEEEEEccChHHHHHHHHHHHhhC-CCCEEEEEcCC
Confidence 5788999999999999999999998642 34788888886
|
|
| >PRK05086 malate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.53 E-value=0.0012 Score=67.07 Aligned_cols=117 Identities=17% Similarity=0.167 Sum_probs=76.3
Q ss_pred CEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEEec
Q 010075 13 KTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVPG 92 (519)
Q Consensus 13 k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v~g 92 (519)
|+|+|.||||.+|++++..|.........+.++.|++.. .. +.+ ++ .+ ......+.|
T Consensus 1 ~KI~IIGAsG~VG~aia~~l~~~~~~~~el~L~d~~~~~-~g-~al--Dl-----------------~~--~~~~~~i~~ 57 (312)
T PRK05086 1 MKVAVLGAAGGIGQALALLLKTQLPAGSELSLYDIAPVT-PG-VAV--DL-----------------SH--IPTAVKIKG 57 (312)
T ss_pred CEEEEECCCCHHHHHHHHHHHcCCCCccEEEEEecCCCC-cc-eeh--hh-----------------hc--CCCCceEEE
Confidence 689999999999999999886544444567777765431 11 000 00 00 011122333
Q ss_pred cCCCCCCCCChhhhHHHHhcCccEEEEcCccCCc-cccHHHHHHHhHHHHHHHHHHHHhccCCceEEEEec
Q 010075 93 DISSEDLGLKDSNLKEELWNELDIMVNSAAITKF-DERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVST 162 (519)
Q Consensus 93 Dl~~~~lgls~~~~~~~l~~~vdiViH~Aa~v~f-~~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V~vST 162 (519)
.. ..+.. ..+.++|+||-+||..+- ..+....+..|....+++++..++. +.+++|.++|
T Consensus 58 -~~-------~~d~~-~~l~~~DiVIitaG~~~~~~~~R~dll~~N~~i~~~ii~~i~~~-~~~~ivivvs 118 (312)
T PRK05086 58 -FS-------GEDPT-PALEGADVVLISAGVARKPGMDRSDLFNVNAGIVKNLVEKVAKT-CPKACIGIIT 118 (312)
T ss_pred -eC-------CCCHH-HHcCCCCEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHh-CCCeEEEEcc
Confidence 11 12222 445679999999998543 3456777999999999999999987 7888887776
|
|
| >PRK05579 bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Validated | Back alignment and domain information |
|---|
Probab=97.46 E-value=0.00037 Score=72.96 Aligned_cols=78 Identities=15% Similarity=0.268 Sum_probs=54.7
Q ss_pred hcCCCEEEEeCC----------------ccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHH
Q 010075 9 FLENKTILVSGV----------------TGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLK 72 (519)
Q Consensus 9 ~~~~k~VlITGa----------------TGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~ 72 (519)
.++||+|+|||| ||.+|.++++.|.+.| .+|+++.++.....
T Consensus 185 ~l~gk~vlITgG~T~E~ID~VR~isN~SSG~~G~aiA~~l~~~G---a~V~~v~~~~~~~~------------------- 242 (399)
T PRK05579 185 DLAGKRVLITAGPTREPIDPVRYITNRSSGKMGYALARAAARRG---ADVTLVSGPVNLPT------------------- 242 (399)
T ss_pred ccCCCEEEEeCCCccccccceeeeccCCcchHHHHHHHHHHHCC---CEEEEeCCCccccC-------------------
Confidence 368999999999 9999999999999999 67788777642100
Q ss_pred hhhccccccccCCceEEEeccCCCCCCCCChhhhHHHH---hcCccEEEEcCccCCcc
Q 010075 73 EKWGTRLNSFISEKITFVPGDISSEDLGLKDSNLKEEL---WNELDIMVNSAAITKFD 127 (519)
Q Consensus 73 ~~~~~~~~~~~~~~v~~v~gDl~~~~lgls~~~~~~~l---~~~vdiViH~Aa~v~f~ 127 (519)
...+ ...|+++ ..+..+.+ .+++|++||+||...|.
T Consensus 243 -----------~~~~--~~~dv~~------~~~~~~~v~~~~~~~DilI~~Aav~d~~ 281 (399)
T PRK05579 243 -----------PAGV--KRIDVES------AQEMLDAVLAALPQADIFIMAAAVADYR 281 (399)
T ss_pred -----------CCCc--EEEccCC------HHHHHHHHHHhcCCCCEEEEcccccccc
Confidence 1122 3457774 33333222 35699999999987653
|
|
| >COG1748 LYS9 Saccharopine dehydrogenase and related proteins [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=97.43 E-value=0.00044 Score=71.42 Aligned_cols=90 Identities=21% Similarity=0.248 Sum_probs=67.7
Q ss_pred CEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEEec
Q 010075 13 KTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVPG 92 (519)
Q Consensus 13 k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v~g 92 (519)
++|+|.|| |++|+.++.+|++++. .+|++..|++.... |+. .. ...++++++.
T Consensus 2 ~~ilviGa-G~Vg~~va~~la~~~d--~~V~iAdRs~~~~~---~i~-------------~~--------~~~~v~~~~v 54 (389)
T COG1748 2 MKILVIGA-GGVGSVVAHKLAQNGD--GEVTIADRSKEKCA---RIA-------------EL--------IGGKVEALQV 54 (389)
T ss_pred CcEEEECC-chhHHHHHHHHHhCCC--ceEEEEeCCHHHHH---HHH-------------hh--------ccccceeEEe
Confidence 68999998 9999999999999874 79999999865432 221 10 1258999999
Q ss_pred cCCCCCCCCChhhhHHHHhcCccEEEEcCccCCccccHHHHHHHhHHHHHHHHHHHHhc
Q 010075 93 DISSEDLGLKDSNLKEELWNELDIMVNSAAITKFDERYDVAFGINTLGVIHLVNFAKKC 151 (519)
Q Consensus 93 Dl~~~~lgls~~~~~~~l~~~vdiViH~Aa~v~f~~~~~~~~~~Nv~gt~~ll~~a~~~ 151 (519)
|+.+ .+...+++++.|+|||++.... +..++++|.+.
T Consensus 55 D~~d-------~~al~~li~~~d~VIn~~p~~~---------------~~~i~ka~i~~ 91 (389)
T COG1748 55 DAAD-------VDALVALIKDFDLVINAAPPFV---------------DLTILKACIKT 91 (389)
T ss_pred cccC-------hHHHHHHHhcCCEEEEeCCchh---------------hHHHHHHHHHh
Confidence 9994 4444588888999999987521 12578888886
|
|
| >COG0623 FabI Enoyl-[acyl-carrier-protein] | Back alignment and domain information |
|---|
Probab=97.37 E-value=0.01 Score=56.37 Aligned_cols=118 Identities=21% Similarity=0.264 Sum_probs=66.7
Q ss_pred hhcCCCEEEEeCCc--cHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCC
Q 010075 8 EFLENKTILVSGVT--GFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISE 85 (519)
Q Consensus 8 ~~~~~k~VlITGaT--GFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~ 85 (519)
-++.||++||+|-. --|+..+++.|.+.|. ++....... ....|++ .+.++. .
T Consensus 2 g~L~GK~~lI~Gvan~rSIAwGIAk~l~~~GA---eL~fTy~~e---~l~krv~----------~la~~~---------~ 56 (259)
T COG0623 2 GLLEGKRILIMGVANNRSIAWGIAKALAEQGA---ELAFTYQGE---RLEKRVE----------ELAEEL---------G 56 (259)
T ss_pred CccCCceEEEEEecccccHHHHHHHHHHHcCC---EEEEEeccH---HHHHHHH----------HHHhhc---------c
Confidence 36889999999954 3588999999999994 444433332 2222322 111222 1
Q ss_pred ceEEEeccCCCCCCCCChhhhHHHHhcCccEEEEcCccCC-------cc----ccHHHHHHHhHHHHHHHHHHHHh
Q 010075 86 KITFVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITK-------FD----ERYDVAFGINTLGVIHLVNFAKK 150 (519)
Q Consensus 86 ~v~~v~gDl~~~~lgls~~~~~~~l~~~vdiViH~Aa~v~-------f~----~~~~~~~~~Nv~gt~~ll~~a~~ 150 (519)
.-.++++|+++...--.-.+.+++-..+.|.++|+-|... |- +.+..+.++-..+-..+.+.|+.
T Consensus 57 s~~v~~cDV~~d~~i~~~f~~i~~~~g~lD~lVHsIaFa~k~el~G~~~dtsre~f~~a~~IS~YS~~~lak~a~~ 132 (259)
T COG0623 57 SDLVLPCDVTNDESIDALFATIKKKWGKLDGLVHSIAFAPKEELKGDYLDTSREGFLIAMDISAYSFTALAKAARP 132 (259)
T ss_pred CCeEEecCCCCHHHHHHHHHHHHHhhCcccEEEEEeccCChHHhCCcccccCHHHHHhHhhhhHhhHHHHHHHHHH
Confidence 2357899999632111011111222346999999999864 21 33444455555555555555554
|
|
| >cd01078 NAD_bind_H4MPT_DH NADP binding domain of methylene tetrahydromethanopterin dehydrogenase | Back alignment and domain information |
|---|
Probab=97.29 E-value=0.0015 Score=61.46 Aligned_cols=83 Identities=20% Similarity=0.174 Sum_probs=54.0
Q ss_pred cCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 010075 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (519)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (519)
+++++++|+||||.+|+.+++.|++.+ .+|+++.|+.. ..+.+.+ .+.+. .....
T Consensus 26 l~~~~vlVlGgtG~iG~~~a~~l~~~g---~~V~l~~R~~~---~~~~l~~---------~l~~~----------~~~~~ 80 (194)
T cd01078 26 LKGKTAVVLGGTGPVGQRAAVLLAREG---ARVVLVGRDLE---RAQKAAD---------SLRAR----------FGEGV 80 (194)
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCC---CEEEEEcCCHH---HHHHHHH---------HHHhh----------cCCcE
Confidence 578999999999999999999999876 57888888631 1122221 11111 12234
Q ss_pred EeccCCCCCCCCChhhhHHHHhcCccEEEEcCccC
Q 010075 90 VPGDISSEDLGLKDSNLKEELWNELDIMVNSAAIT 124 (519)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~~~vdiViH~Aa~v 124 (519)
..+|..+ .++. ...+.+.|+||++.+..
T Consensus 81 ~~~~~~~------~~~~-~~~~~~~diVi~at~~g 108 (194)
T cd01078 81 GAVETSD------DAAR-AAAIKGADVVFAAGAAG 108 (194)
T ss_pred EEeeCCC------HHHH-HHHHhcCCEEEECCCCC
Confidence 4556653 3333 36667899999976653
|
Methylene Tetrahydromethanopterin Dehydrogenase (H4MPT DH) NADP binding domain. NADP-dependent H4MPT DH catalyzes the dehydrogenation of methylene- H4MPT and methylene-tetrahydrofolate (H4F) with NADP+ as cofactor. H4F and H4MPT are both cofactors that carry the one-carbon units between the formyl and methyl oxidation level. H4F and H4MPT are structurally analogous to each other with respect to the pterin moiety, but each has distinct side chain. H4MPT is present only in anaerobic methanogenic archaea and aerobic methylotrophic proteobacteria. H4MPT seems to have evolved independently from H4F and functions as a distinct carrier in C1 metabolism. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclo |
| >cd00704 MDH Malate dehydrogenase | Back alignment and domain information |
|---|
Probab=97.23 E-value=0.0051 Score=62.75 Aligned_cols=103 Identities=14% Similarity=0.109 Sum_probs=68.6
Q ss_pred EEEEeCCccHHHHHHHHHHHHhCCCcc-----EEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceE
Q 010075 14 TILVSGVTGFVAKVFIEKILRVQPNVK-----KLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKIT 88 (519)
Q Consensus 14 ~VlITGaTGFlG~~Lv~~LL~~g~~v~-----~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~ 88 (519)
+|.||||+|.+|+.++..|+..+ -+. .+.++.+.+.. ++..
T Consensus 2 KV~IiGAaG~VG~~~a~~L~~~~-~~~~~~~~~l~L~Di~~~~---------------------------------~~~~ 47 (323)
T cd00704 2 HVLITGAAGQIGYNLLFLIASGE-LFGDDQPVILHLLDIPPAM---------------------------------KALE 47 (323)
T ss_pred EEEEECCCcHHHHHHHHHHHhCC-ccCCCCceEEEEEecCCcc---------------------------------Cccc
Confidence 69999999999999999888643 222 47777775421 1122
Q ss_pred EEeccCCCCCCCCCh-----hhhHHHHhcCccEEEEcCccCCc-cccHHHHHHHhHHHHHHHHHHHHhc
Q 010075 89 FVPGDISSEDLGLKD-----SNLKEELWNELDIMVNSAAITKF-DERYDVAFGINTLGVIHLVNFAKKC 151 (519)
Q Consensus 89 ~v~gDl~~~~lgls~-----~~~~~~l~~~vdiViH~Aa~v~f-~~~~~~~~~~Nv~gt~~ll~~a~~~ 151 (519)
....|+.+....+.. .+. .+.+++.|+|||+||..+- .++..+.+..|+.-.+++....++.
T Consensus 48 g~~~Dl~d~~~~~~~~~~i~~~~-~~~~~~aDiVVitAG~~~~~g~tR~dll~~N~~i~~~i~~~i~~~ 115 (323)
T cd00704 48 GVVMELQDCAFPLLKGVVITTDP-EEAFKDVDVAILVGAFPRKPGMERADLLRKNAKIFKEQGEALNKV 115 (323)
T ss_pred eeeeehhhhcccccCCcEEecCh-HHHhCCCCEEEEeCCCCCCcCCcHHHHHHHhHHHHHHHHHHHHHh
Confidence 233344332100000 111 2566889999999998643 4567778999999999999888876
|
Malate dehydrogenase (MDH) is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. MDHs belong to the NAD-dependent, lactate dehydrogenase (LDH)-like, 2-hydroxycarboxylate dehydrogenase family, which also includes the GH4 family of glycoside hydrolases. They are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others. |
| >cd01338 MDH_choloroplast_like Chloroplast-like malate dehydrogenases | Back alignment and domain information |
|---|
Probab=97.19 E-value=0.0025 Score=64.94 Aligned_cols=184 Identities=14% Similarity=0.061 Sum_probs=107.0
Q ss_pred CCEEEEeCCccHHHHHHHHHHHHhCC----CccEEEEEEecCCcccH-HHHHHHHHhhhhhHHHHHhhhccccccccCCc
Q 010075 12 NKTILVSGVTGFVAKVFIEKILRVQP----NVKKLYLFVRAADIDSA-ALRFQNEVLAKDVFNVLKEKWGTRLNSFISEK 86 (519)
Q Consensus 12 ~k~VlITGaTGFlG~~Lv~~LL~~g~----~v~~V~~LvR~~~~~~~-~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~ 86 (519)
.++|.|+||+|++|..++-.|+..+- ...+++++...+....+ .+.+ ++.+.. ..+ ..+
T Consensus 2 p~KV~IiGa~G~VG~~~a~~l~~~~~~~~~~~~el~L~Di~~~~~~a~g~a~--Dl~~~~-------------~~~-~~~ 65 (322)
T cd01338 2 PVRVAVTGAAGQIGYSLLFRIASGEMFGPDQPVILQLLELPQALKALEGVAM--ELEDCA-------------FPL-LAE 65 (322)
T ss_pred CeEEEEECCCcHHHHHHHHHHHhccccCCCCceEEEEEecCCcccccceeeh--hhhhcc-------------ccc-cCc
Confidence 46899999999999999999986542 12278888774322100 0000 110000 000 011
Q ss_pred eEEEeccCCCCCCCCChhhhHHHHhcCccEEEEcCccCCc-cccHHHHHHHhHHHHHHHHHHHHhccCCceEEEEeccee
Q 010075 87 ITFVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF-DERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAYV 165 (519)
Q Consensus 87 v~~v~gDl~~~~lgls~~~~~~~l~~~vdiViH~Aa~v~f-~~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V~vSTa~v 165 (519)
+++. + .+. ..+.+.|+||-+|+..+- .++..+.+..|+.-.+.+....++......++.+-|
T Consensus 66 ~~i~-~-----------~~~--~~~~daDivvitaG~~~k~g~tR~dll~~N~~i~~~i~~~i~~~~~~~~iiivvs--- 128 (322)
T cd01338 66 IVIT-D-----------DPN--VAFKDADWALLVGAKPRGPGMERADLLKANGKIFTAQGKALNDVASRDVKVLVVG--- 128 (322)
T ss_pred eEEe-c-----------CcH--HHhCCCCEEEEeCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHhhCCCCeEEEEec---
Confidence 2211 1 111 445789999999998543 456677799999999999998887632233333333
Q ss_pred ecCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcHHHHHHHHHHHHHHHh
Q 010075 166 AGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLMQQS 245 (519)
Q Consensus 166 ~~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~Y~~sK~~aE~lv~~~ 245 (519)
| |+|.-.- .+ .+..| ..++.+.|+.|+..++++....
T Consensus 129 N----------------PvD~~t~--~~--------------------~k~sg-----~~p~~~ViG~t~LDs~Rl~~~l 165 (322)
T cd01338 129 N----------------PCNTNAL--IA--------------------MKNAP-----DIPPDNFTAMTRLDHNRAKSQL 165 (322)
T ss_pred C----------------cHHHHHH--HH--------------------HHHcC-----CCChHheEEehHHHHHHHHHHH
Confidence 1 1221100 00 00110 0134457888999999988766
Q ss_pred --hcCCcEEEEecCccccCCCC-CCCccc
Q 010075 246 --KENLSLVIIRPTVVSGTYKE-PFPGWV 271 (519)
Q Consensus 246 --~~~lp~~IvRPs~V~g~~~~-p~~gw~ 271 (519)
..+++...+|..+|+|+..+ -+|.|.
T Consensus 166 a~~lgv~~~~v~~~~V~GeHG~s~vp~~S 194 (322)
T cd01338 166 AKKAGVPVTDVKNMVIWGNHSPTQYPDFT 194 (322)
T ss_pred HHHhCcChhHeEEEEEEeCCcccEEEehh
Confidence 45788899999898887653 234444
|
MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are bacterial MDHs, and plant MDHs localized to the choloroplasts. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others. |
| >TIGR01758 MDH_euk_cyt malate dehydrogenase, NAD-dependent | Back alignment and domain information |
|---|
Probab=97.06 E-value=0.0071 Score=61.72 Aligned_cols=112 Identities=14% Similarity=0.104 Sum_probs=72.3
Q ss_pred EEEEeCCccHHHHHHHHHHHHhCCCcc-----EEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceE
Q 010075 14 TILVSGVTGFVAKVFIEKILRVQPNVK-----KLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKIT 88 (519)
Q Consensus 14 ~VlITGaTGFlG~~Lv~~LL~~g~~v~-----~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~ 88 (519)
+|.|+||+|.+|+.++..|...+- +. .++++.+.+.. ++..
T Consensus 1 ~V~IiGaaG~VG~~~a~~l~~~~~-~~~~~e~el~LiD~~~~~---------------------------------~~a~ 46 (324)
T TIGR01758 1 RVVVTGAAGQIGYALLPMIARGRM-LGKDQPIILHLLDIPPAM---------------------------------KVLE 46 (324)
T ss_pred CEEEECCCcHHHHHHHHHHHhccc-cCCCCccEEEEEecCCcc---------------------------------cccc
Confidence 489999999999999998886431 11 57777775432 1123
Q ss_pred EEeccCCCCCCCC-C----hhhhHHHHhcCccEEEEcCccCCc-cccHHHHHHHhHHHHHHHHHHHHhccCCceEEEE
Q 010075 89 FVPGDISSEDLGL-K----DSNLKEELWNELDIMVNSAAITKF-DERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHV 160 (519)
Q Consensus 89 ~v~gDl~~~~lgl-s----~~~~~~~l~~~vdiViH~Aa~v~f-~~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V~v 160 (519)
.+..|+.+....+ . ..+. ...+.++|+|||+||..+- .++....+..|+.-.+.+.+..++..+...++.+
T Consensus 47 g~~~Dl~d~~~~~~~~~~~~~~~-~~~~~~aDiVVitAG~~~~~~~tr~~ll~~N~~i~k~i~~~i~~~~~~~~iiiv 123 (324)
T TIGR01758 47 GVVMELMDCAFPLLDGVVPTHDP-AVAFTDVDVAILVGAFPRKEGMERRDLLSKNVKIFKEQGRALDKLAKKDCKVLV 123 (324)
T ss_pred eeEeehhcccchhcCceeccCCh-HHHhCCCCEEEEcCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHhhCCCCeEEEE
Confidence 3344444332100 0 0121 2556789999999998654 4557788999999999999988886223344433
|
This model represents the NAD-dependent cytosolic malate dehydrogenase from eukaryotes. The enzyme from pig has been studied by X-ray crystallography |
| >PF01118 Semialdhyde_dh: Semialdehyde dehydrogenase, NAD binding domain; InterPro: IPR000534 The semialdehyde dehydrogenase family is found in N-acetyl-glutamine semialdehyde dehydrogenase (AgrC), which is involved in arginine biosynthesis, and aspartate-semialdehyde dehydrogenase [], an enzyme involved in the biosynthesis of various amino acids from aspartate | Back alignment and domain information |
|---|
Probab=97.02 E-value=0.001 Score=57.73 Aligned_cols=40 Identities=15% Similarity=0.356 Sum_probs=32.6
Q ss_pred EEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecC-CcccH
Q 010075 14 TILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAA-DIDSA 54 (519)
Q Consensus 14 ~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~-~~~~~ 54 (519)
+|.|.||||++|+.|++.|++ .|++.-+.+..|+. .++..
T Consensus 1 rV~IvGAtG~vG~~l~~lL~~-hp~~e~~~~~~~~~~~g~~~ 41 (121)
T PF01118_consen 1 RVAIVGATGYVGRELLRLLAE-HPDFELVALVSSSRSAGKPL 41 (121)
T ss_dssp EEEEESTTSHHHHHHHHHHHH-TSTEEEEEEEESTTTTTSBH
T ss_pred CEEEECCCCHHHHHHHHHHhc-CCCccEEEeeeeccccCCee
Confidence 689999999999999999988 78887777777776 44443
|
This family is also found in yeast and fungal Arg5,6 protein, which is cleaved into the enzymes N-acety-gamma-glutamyl-phosphate reductase and acetylglutamate kinase. These are also involved in arginine biosynthesis. All proteins in this entry contain a NAD binding region of semialdehyde dehydrogenase.; GO: 0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0006520 cellular amino acid metabolic process, 0055114 oxidation-reduction process, 0005737 cytoplasm; PDB: 3Q0E_B 1MB4_A 3PZR_A 1MC4_A 3TZ6_A 3VOS_A 2CVO_B 2R00_C 2QZ9_A 2EP5_C .... |
| >PF04127 DFP: DNA / pantothenate metabolism flavoprotein; InterPro: IPR007085 This entry represents the C-terminal domain found in DNA/pantothenate metabolism flavoproteins, which affects synthesis of DNA and pantothenate metabolism | Back alignment and domain information |
|---|
Probab=97.01 E-value=0.002 Score=60.14 Aligned_cols=81 Identities=19% Similarity=0.287 Sum_probs=47.7
Q ss_pred cCCCEEEEeCC----------------ccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHh
Q 010075 10 LENKTILVSGV----------------TGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKE 73 (519)
Q Consensus 10 ~~~k~VlITGa----------------TGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~ 73 (519)
++||+||||+| ||-+|..|++.+++.| .+|+++..+..-.
T Consensus 1 l~gk~vlITaG~T~E~iD~VR~ItN~SSG~~G~~lA~~~~~~G---a~V~li~g~~~~~--------------------- 56 (185)
T PF04127_consen 1 LKGKKVLITAGPTREPIDPVRFITNRSSGKMGAALAEEAARRG---AEVTLIHGPSSLP--------------------- 56 (185)
T ss_dssp -TT-EEEEEESB-EEESSSSEEEEES--SHHHHHHHHHHHHTT----EEEEEE-TTS-----------------------
T ss_pred CCCCEEEEECCCccccCCCceEecCCCcCHHHHHHHHHHHHCC---CEEEEEecCcccc---------------------
Confidence 47899999986 7999999999999999 5677777663211
Q ss_pred hhccccccccCCceEEEeccCCCCCCCCChhhhHHHHhcCccEEEEcCccCCccc
Q 010075 74 KWGTRLNSFISEKITFVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKFDE 128 (519)
Q Consensus 74 ~~~~~~~~~~~~~v~~v~gDl~~~~lgls~~~~~~~l~~~vdiViH~Aa~v~f~~ 128 (519)
.+..+..+..+=.+. -.+.....+.+.|++||+||...|..
T Consensus 57 ---------~p~~~~~i~v~sa~e-----m~~~~~~~~~~~Di~I~aAAVsDf~p 97 (185)
T PF04127_consen 57 ---------PPPGVKVIRVESAEE-----MLEAVKELLPSADIIIMAAAVSDFRP 97 (185)
T ss_dssp -----------TTEEEEE-SSHHH-----HHHHHHHHGGGGSEEEE-SB--SEEE
T ss_pred ---------ccccceEEEecchhh-----hhhhhccccCcceeEEEecchhheee
Confidence 024566666543311 11112234457899999999988753
|
These proteins contain ATP, phosphopantothenate, and cysteine binding sites. The structure of this domain has been determined in human phosphopantothenoylcysteine (PPC) synthetase [] and as the PPC synthase domain (CoaB) from the Escherichia coli coenzyme A bifunctional protein CoaBC []. This domain adopts a 3-layer alpha/beta/alpha fold with mixed beta-sheets, which topologically resembles a combination of Rossmann-like and ribokinase-like folds. The structure of these proteins predicts a ping pong mechanism with initial formation of an acyladenylate intermediate, followed by release of pyrophosphate and attack by cysteine to form the final products PPC and AMP. ; PDB: 1U7W_A 1U7U_A 1U80_C 1U7Z_A 1P9O_B 2GK4_A. |
| >PRK12548 shikimate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.01 E-value=0.0036 Score=62.90 Aligned_cols=86 Identities=17% Similarity=0.185 Sum_probs=54.3
Q ss_pred cCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 010075 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (519)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (519)
.++++++|||| |.+|++++..|.+.|. .+|+++.|+.......+.+.++ +.+. ..++..
T Consensus 124 ~~~k~vlI~GA-GGagrAia~~La~~G~--~~V~I~~R~~~~~~~a~~l~~~---------l~~~---------~~~~~~ 182 (289)
T PRK12548 124 VKGKKLTVIGA-GGAATAIQVQCALDGA--KEITIFNIKDDFYERAEQTAEK---------IKQE---------VPECIV 182 (289)
T ss_pred cCCCEEEEECC-cHHHHHHHHHHHHCCC--CEEEEEeCCchHHHHHHHHHHH---------Hhhc---------CCCcee
Confidence 46899999998 8999999999998873 5699999975321122222211 1111 123445
Q ss_pred EeccCCCCCCCCChhhhHHHHhcCccEEEEcCcc
Q 010075 90 VPGDISSEDLGLKDSNLKEELWNELDIMVNSAAI 123 (519)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~~~vdiViH~Aa~ 123 (519)
...|+.+ .+......++.|+|||+-..
T Consensus 183 ~~~d~~~-------~~~~~~~~~~~DilINaTp~ 209 (289)
T PRK12548 183 NVYDLND-------TEKLKAEIASSDILVNATLV 209 (289)
T ss_pred EEechhh-------hhHHHhhhccCCEEEEeCCC
Confidence 5667763 22233556678999997554
|
|
| >TIGR00715 precor6x_red precorrin-6x reductase | Back alignment and domain information |
|---|
Probab=96.99 E-value=0.0068 Score=59.63 Aligned_cols=36 Identities=14% Similarity=0.172 Sum_probs=31.6
Q ss_pred CEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcc
Q 010075 13 KTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADID 52 (519)
Q Consensus 13 k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~ 52 (519)
|+|||+||||. |+.|++.|.+.| ++|++.+|+..+.
T Consensus 1 m~ILvlGGT~e-gr~la~~L~~~g---~~v~~s~~t~~~~ 36 (256)
T TIGR00715 1 MTVLLMGGTVD-SRAIAKGLIAQG---IEILVTVTTSEGK 36 (256)
T ss_pred CeEEEEechHH-HHHHHHHHHhCC---CeEEEEEccCCcc
Confidence 58999999999 999999999887 6788999987554
|
This enzyme was found to be a monomer by gel filtration. |
| >PF03435 Saccharop_dh: Saccharopine dehydrogenase ; InterPro: IPR005097 This entry represents saccharopine dehydrogenase and homospermidine synthase | Back alignment and domain information |
|---|
Probab=96.80 E-value=0.0021 Score=67.36 Aligned_cols=99 Identities=23% Similarity=0.319 Sum_probs=63.1
Q ss_pred EEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEEeccC
Q 010075 15 ILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVPGDI 94 (519)
Q Consensus 15 VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v~gDl 94 (519)
|+|.|| |++|+.+++.|++..+ ..+|++..|+.... +++. ++ ....++..+..|+
T Consensus 1 IlvlG~-G~vG~~~~~~L~~~~~-~~~v~va~r~~~~~---~~~~-------------~~-------~~~~~~~~~~~d~ 55 (386)
T PF03435_consen 1 ILVLGA-GRVGSAIARLLARRGP-FEEVTVADRNPEKA---ERLA-------------EK-------LLGDRVEAVQVDV 55 (386)
T ss_dssp EEEE---SHHHHHHHHHHHCTTC-E-EEEEEESSHHHH---HHHH-------------T---------TTTTEEEEE--T
T ss_pred CEEEcC-cHHHHHHHHHHhcCCC-CCcEEEEECCHHHH---HHHH-------------hh-------ccccceeEEEEec
Confidence 789999 9999999999999764 33889998875321 2221 11 0137899999999
Q ss_pred CCCCCCCChhhhHHHHhcCccEEEEcCccCCccccHHHHHHHhHHHHHHHHHHHHhccCCceEEEEecce
Q 010075 95 SSEDLGLKDSNLKEELWNELDIMVNSAAITKFDERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAY 164 (519)
Q Consensus 95 ~~~~lgls~~~~~~~l~~~vdiViH~Aa~v~f~~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V~vSTa~ 164 (519)
.+ .+.+..++++.|+||||++.. + ...++++|.+. + ..|+.+++
T Consensus 56 ~~-------~~~l~~~~~~~dvVin~~gp~-~--------------~~~v~~~~i~~-g---~~yvD~~~ 99 (386)
T PF03435_consen 56 ND-------PESLAELLRGCDVVINCAGPF-F--------------GEPVARACIEA-G---VHYVDTSY 99 (386)
T ss_dssp TT-------HHHHHHHHTTSSEEEE-SSGG-G--------------HHHHHHHHHHH-T----EEEESS-
T ss_pred CC-------HHHHHHHHhcCCEEEECCccc-h--------------hHHHHHHHHHh-C---CCeeccch
Confidence 95 333568889999999999873 1 22477788876 3 34555443
|
Saccharopine reductase (SR) 1.5.1.10 from EC) catalyses the condensation of l-alpha-aminoadipate-delta-semialdehyde (AASA) with l-glutamate to give an imine, which is reduced by NADPH to give saccharopine []. In some organisms this enzyme is found as a bifunctional polypeptide with lysine ketoglutarate reductase (PF). Saccharopine dehydrogenase can also function as a saccharopine reductase. Homospermidine synthase proteins (2.5.1.44 from EC). Homospermidine synthase (HSS) catalyses the synthesis of the polyamine homospermidine from 2 mol putrescine in an NAD+-dependent reaction [].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2AXQ_A 1E5Q_A 1FF9_A 1E5L_A 2PH5_A 3IC5_A 3ABI_A. |
| >TIGR00521 coaBC_dfp phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase, prokaryotic | Back alignment and domain information |
|---|
Probab=96.62 E-value=0.0058 Score=63.83 Aligned_cols=77 Identities=21% Similarity=0.361 Sum_probs=53.1
Q ss_pred cCCCEEEEeCC----------------ccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHh
Q 010075 10 LENKTILVSGV----------------TGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKE 73 (519)
Q Consensus 10 ~~~k~VlITGa----------------TGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~ 73 (519)
++|++|+|||| ||.+|..+++.|...| .+|+++.++.....
T Consensus 183 ~~~~~vlit~g~t~E~iD~VR~itN~SSG~~g~~~a~~~~~~G---a~V~~~~g~~~~~~-------------------- 239 (390)
T TIGR00521 183 LEGKRVLITAGPTREPIDPVRFISNLSSGKMGLALAEAAYKRG---ADVTLITGPVSLLT-------------------- 239 (390)
T ss_pred cCCceEEEecCCccCCCCceeeecCCCcchHHHHHHHHHHHCC---CEEEEeCCCCccCC--------------------
Confidence 78999999999 4789999999999999 66777776542110
Q ss_pred hhccccccccCCceEEEeccCCCCCCCCChhhhHH----HHhcCccEEEEcCccCCcc
Q 010075 74 KWGTRLNSFISEKITFVPGDISSEDLGLKDSNLKE----ELWNELDIMVNSAAITKFD 127 (519)
Q Consensus 74 ~~~~~~~~~~~~~v~~v~gDl~~~~lgls~~~~~~----~l~~~vdiViH~Aa~v~f~ 127 (519)
...+ ...|+++ ..+..+ ....+.|++||+||...|.
T Consensus 240 ----------~~~~--~~~~v~~------~~~~~~~~~~~~~~~~D~~i~~Aavsd~~ 279 (390)
T TIGR00521 240 ----------PPGV--KSIKVST------AEEMLEAALNELAKDFDIFISAAAVADFK 279 (390)
T ss_pred ----------CCCc--EEEEecc------HHHHHHHHHHhhcccCCEEEEcccccccc
Confidence 1222 3457764 333312 2335689999999997663
|
This model represents a bifunctional enzyme that catalyzes the second and third steps (cysteine ligation, EC 6.3.2.5, and decarboxylation, EC 4.1.1.36) in the biosynthesis of coenzyme A (CoA) from pantothenate in bacteria. In early descriptions of this flavoprotein, a ts mutation in one region of the protein appeared to cause a defect in DNA metaobolism rather than an increased need for the pantothenate precursor beta-alanine. This protein was then called dfp, for DNA/pantothenate metabolism flavoprotein. The authors responsible for detecting phosphopantothenate--cysteine ligase activity suggest renaming this bifunctional protein coaBC for its role in CoA biosynthesis. This enzyme contains the FMN cofactor, but no FAD or pyruvoyl group. The amino-terminal region contains the phosphopantothenoylcysteine decarboxylase activity. |
| >PF00056 Ldh_1_N: lactate/malate dehydrogenase, NAD binding domain Prosite entry for lactate dehydrogenase Prosite entry for malate dehydrogenase; InterPro: IPR001236 L-lactate dehydrogenases are metabolic enzymes which catalyse the conversion of L-lactate to pyruvate, the last step in anaerobic glycolysis [] | Back alignment and domain information |
|---|
Probab=96.49 E-value=0.084 Score=47.03 Aligned_cols=113 Identities=14% Similarity=0.126 Sum_probs=73.2
Q ss_pred CEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEEec
Q 010075 13 KTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVPG 92 (519)
Q Consensus 13 k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v~g 92 (519)
++|.|.||+|.+|++++-.|+.. +-+.+++++.+........ .-++..... ....+.....+
T Consensus 1 ~KV~IiGa~G~VG~~~a~~l~~~-~l~~ei~L~D~~~~~~~g~---a~Dl~~~~~--------------~~~~~~~i~~~ 62 (141)
T PF00056_consen 1 MKVAIIGAAGNVGSTLALLLAQQ-GLADEIVLIDINEDKAEGE---ALDLSHASA--------------PLPSPVRITSG 62 (141)
T ss_dssp SEEEEESTTSHHHHHHHHHHHHT-TTSSEEEEEESSHHHHHHH---HHHHHHHHH--------------GSTEEEEEEES
T ss_pred CEEEEECCCChHHHHHHHHHHhC-CCCCceEEeccCcccceee---ehhhhhhhh--------------hcccccccccc
Confidence 57999999999999999999886 4557888888874321111 111111100 00122233332
Q ss_pred cCCCCCCCCChhhhHHHHhcCccEEEEcCccCC-ccccHHHHHHHhHHHHHHHHHHHHhccCCceEE
Q 010075 93 DISSEDLGLKDSNLKEELWNELDIMVNSAAITK-FDERYDVAFGINTLGVIHLVNFAKKCVKLKVFV 158 (519)
Q Consensus 93 Dl~~~~lgls~~~~~~~l~~~vdiViH~Aa~v~-f~~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V 158 (519)
|. +.+.+.|+||-+|+..+ -.++..+.++.|..-.+++.+...+. +.+.++
T Consensus 63 ~~--------------~~~~~aDivvitag~~~~~g~sR~~ll~~N~~i~~~~~~~i~~~-~p~~~v 114 (141)
T PF00056_consen 63 DY--------------EALKDADIVVITAGVPRKPGMSRLDLLEANAKIVKEIAKKIAKY-APDAIV 114 (141)
T ss_dssp SG--------------GGGTTESEEEETTSTSSSTTSSHHHHHHHHHHHHHHHHHHHHHH-STTSEE
T ss_pred cc--------------cccccccEEEEeccccccccccHHHHHHHhHhHHHHHHHHHHHh-CCccEE
Confidence 21 23468999999999754 34667778899999999999988886 344333
|
L-lactate dehydrogenase is also found as a lens crystallin in bird and crocodile eyes. L-2-hydroxyisocaproate dehydrogenases are also members of the family. Malate dehydrogenases catalyse the interconversion of malate to oxaloacetate []. The enzyme participates in the citric acid cycle. This entry represents the N-terminal, and is thought to be a Rossmann NAD-binding fold.; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1IB6_B 3HHP_C 1IE3_A 2PWZ_A 1EMD_A 2CMD_A 1EZ4_D 9LDT_B 9LDB_B 2D4A_C .... |
| >KOG2733 consensus Uncharacterized membrane protein [Function unknown] | Back alignment and domain information |
|---|
Probab=96.48 E-value=0.0077 Score=60.55 Aligned_cols=89 Identities=21% Similarity=0.369 Sum_probs=58.5
Q ss_pred EEEEeCCccHHHHHHHHHHHHhC--CCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEEe
Q 010075 14 TILVSGVTGFVAKVFIEKILRVQ--PNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVP 91 (519)
Q Consensus 14 ~VlITGaTGFlG~~Lv~~LL~~g--~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v~ 91 (519)
-+.|-|||||-|+.+++.+++++ ++ ..+-+..|+.. +|++.+ ..+.+..+.+ +...+ ++.
T Consensus 7 DvVIyGASGfTG~yivee~v~~~~~~~-~slavAGRn~~------KL~~vL------~~~~~k~~~~----ls~~~-i~i 68 (423)
T KOG2733|consen 7 DVVIYGASGFTGKYIVEEAVSSQVFEG-LSLAVAGRNEK------KLQEVL------EKVGEKTGTD----LSSSV-ILI 68 (423)
T ss_pred eEEEEccccccceeeHHHHhhhhcccC-ceEEEecCCHH------HHHHHH------HHHhhccCCC----cccce-EEE
Confidence 48899999999999999999843 22 35556666542 333111 1111222222 23445 888
Q ss_pred ccCCCCCCCCChhhhHHHHhcCccEEEEcCccCCcc
Q 010075 92 GDISSEDLGLKDSNLKEELWNELDIMVNSAAITKFD 127 (519)
Q Consensus 92 gDl~~~~lgls~~~~~~~l~~~vdiViH~Aa~v~f~ 127 (519)
+|.++ ++.+.+.+.+..+|+||+|..+|.
T Consensus 69 ~D~~n-------~~Sl~emak~~~vivN~vGPyR~h 97 (423)
T KOG2733|consen 69 ADSAN-------EASLDEMAKQARVIVNCVGPYRFH 97 (423)
T ss_pred ecCCC-------HHHHHHHHhhhEEEEeccccceec
Confidence 99994 444568889999999999998763
|
|
| >TIGR02114 coaB_strep phosphopantothenate--cysteine ligase, streptococcal | Back alignment and domain information |
|---|
Probab=96.37 E-value=0.0042 Score=60.14 Aligned_cols=31 Identities=19% Similarity=0.331 Sum_probs=24.0
Q ss_pred EEEEeC-CccHHHHHHHHHHHHhCCCccEEEEEEe
Q 010075 14 TILVSG-VTGFVAKVFIEKILRVQPNVKKLYLFVR 47 (519)
Q Consensus 14 ~VlITG-aTGFlG~~Lv~~LL~~g~~v~~V~~LvR 47 (519)
.=+||. +||++|.++++.|++.| .+|+++.|
T Consensus 16 VR~itN~SSGgIG~AIA~~la~~G---a~Vvlv~~ 47 (227)
T TIGR02114 16 VRSITNHSTGHLGKIITETFLSAG---HEVTLVTT 47 (227)
T ss_pred ceeecCCcccHHHHHHHHHHHHCC---CEEEEEcC
Confidence 345555 48999999999999999 56676654
|
In most bacteria, a single bifunctional protein catalyses phosphopantothenoylcysteine decarboxylase and phosphopantothenate--cysteine ligase activities, sequential steps in coenzyme A biosynthesis (see TIGR00521). These activities reside in separate proteins encoded by tandem genes in some bacterial lineages. This model describes proteins from the genera Streptococcus and Enterococcus homologous to the C-terminal region of TIGR00521, corresponding to phosphopantothenate--cysteine ligase activity. |
| >PRK07688 thiamine/molybdopterin biosynthesis ThiF/MoeB-like protein; Validated | Back alignment and domain information |
|---|
Probab=96.14 E-value=0.064 Score=55.11 Aligned_cols=128 Identities=19% Similarity=0.192 Sum_probs=78.1
Q ss_pred hhhcCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHH----HHHHh----h-hhhHHHHHhhhcc
Q 010075 7 VEFLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRF----QNEVL----A-KDVFNVLKEKWGT 77 (519)
Q Consensus 7 ~~~~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl----~~~~~----~-~~~f~~l~~~~~~ 77 (519)
++-++.++|+|.|+ |.+|+.+++.|.+.| |.+|.++.+..-..+-..|- .+++- + ...-+++++-.|
T Consensus 19 Q~~L~~~~VlVvG~-GglGs~va~~La~aG--vg~i~lvD~D~Ve~sNL~RQ~l~~~~dig~g~~Ka~aa~~~l~~inp- 94 (339)
T PRK07688 19 QQKLREKHVLIIGA-GALGTANAEMLVRAG--VGKVTIVDRDYVEWSNLQRQQLYTESDVKNNLPKAVAAKKRLEEINS- 94 (339)
T ss_pred HHHhcCCcEEEECC-CHHHHHHHHHHHHcC--CCeEEEEeCCccCHHHcCccccccHHHhcCCCcHHHHHHHHHHHHCC-
Confidence 45678899999996 889999999999986 57888887754222111110 00010 0 001133333333
Q ss_pred ccccccCCceEEEeccCCCCCCCCChhhhHHHHhcCccEEEEcCccCCccccHHHHHHHhHHHHHHHHHHHHhccCCceE
Q 010075 78 RLNSFISEKITFVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKFDERYDVAFGINTLGVIHLVNFAKKCVKLKVF 157 (519)
Q Consensus 78 ~~~~~~~~~v~~v~gDl~~~~lgls~~~~~~~l~~~vdiViH~Aa~v~f~~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~ 157 (519)
.-+++.+..+++ ..+. ..++++.|+||.+... + ..-..+-++|.+. + ..+
T Consensus 95 ------~v~v~~~~~~~~-------~~~~-~~~~~~~DlVid~~Dn------~--------~~r~~ln~~~~~~-~-iP~ 144 (339)
T PRK07688 95 ------DVRVEAIVQDVT-------AEEL-EELVTGVDLIIDATDN------F--------ETRFIVNDAAQKY-G-IPW 144 (339)
T ss_pred ------CcEEEEEeccCC-------HHHH-HHHHcCCCEEEEcCCC------H--------HHHHHHHHHHHHh-C-CCE
Confidence 235677777877 4443 3677899999988532 1 1222355677764 3 568
Q ss_pred EEEecceeecC
Q 010075 158 VHVSTAYVAGE 168 (519)
Q Consensus 158 V~vSTa~v~~~ 168 (519)
|+.|+...+|.
T Consensus 145 i~~~~~g~~G~ 155 (339)
T PRK07688 145 IYGACVGSYGL 155 (339)
T ss_pred EEEeeeeeeeE
Confidence 89888777764
|
|
| >PRK14874 aspartate-semialdehyde dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.09 E-value=0.012 Score=60.37 Aligned_cols=38 Identities=26% Similarity=0.316 Sum_probs=32.4
Q ss_pred CCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecC
Q 010075 12 NKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAA 49 (519)
Q Consensus 12 ~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~ 49 (519)
+++|+|.||||++|..|++.|.++++.+.++..+.|..
T Consensus 1 ~~~V~IvGAtG~vG~~l~~lL~~~~hp~~~l~~l~s~~ 38 (334)
T PRK14874 1 GYNVAVVGATGAVGREMLNILEERNFPVDKLRLLASAR 38 (334)
T ss_pred CCEEEEECCCCHHHHHHHHHHHhCCCCcceEEEEEccc
Confidence 46899999999999999999998766656888888764
|
|
| >cd05294 LDH-like_MDH_nadp A lactate dehydrogenases-like structure with malate dehydrogenase enzymatic activity | Back alignment and domain information |
|---|
Probab=96.01 E-value=0.071 Score=54.12 Aligned_cols=119 Identities=17% Similarity=0.171 Sum_probs=70.5
Q ss_pred CEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHH-HHHHHHHhhhhhHHHHHhhhccccccccCCceEEEe
Q 010075 13 KTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAA-LRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVP 91 (519)
Q Consensus 13 k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~-~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v~ 91 (519)
|+|.|+||||.+|..++..|+..+. ..+|.++.|..+..... .++ ++.+.+... ....
T Consensus 1 ~kI~IiGatG~vG~~~a~~l~~~g~-~~~v~lvd~~~~~~~l~~~~~-------dl~d~~~~~---------~~~~---- 59 (309)
T cd05294 1 MKVSIIGASGRVGSATALLLAKEDV-VKEINLISRPKSLEKLKGLRL-------DIYDALAAA---------GIDA---- 59 (309)
T ss_pred CEEEEECCCChHHHHHHHHHHhCCC-CCEEEEEECcccccccccccc-------hhhhchhcc---------CCCc----
Confidence 5899999999999999999998763 35788989853111110 010 011100000 0011
Q ss_pred ccCCCCCCCCChhhhHHHHhcCccEEEEcCccCCc-cccHHHHHHHhHHHHHHHHHHHHhccCCceEEEEe
Q 010075 92 GDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF-DERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVS 161 (519)
Q Consensus 92 gDl~~~~lgls~~~~~~~l~~~vdiViH~Aa~v~f-~~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V~vS 161 (519)
.+.- ..+. ..+.+.|+||-+|+..+- +.+....++.|+.-.+.+.+...+...-..++.+|
T Consensus 60 -~i~~------~~d~--~~l~~aDiViitag~p~~~~~~r~dl~~~n~~i~~~~~~~i~~~~~~~~viv~~ 121 (309)
T cd05294 60 -EIKI------SSDL--SDVAGSDIVIITAGVPRKEGMSRLDLAKKNAKIVKKYAKQIAEFAPDTKILVVT 121 (309)
T ss_pred -EEEE------CCCH--HHhCCCCEEEEecCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEeC
Confidence 1110 0112 236789999999997543 34556778889999999988776652222344444
|
The LDH-like MDH proteins have a lactate dehyhydrogenase-like (LDH-like) structure and malate dehydrogenase (MDH) enzymatic activity. This subgroup is composed of some archaeal LDH-like MDHs that prefer NADP(H) rather than NAD(H) as a cofactor. One member, MJ0490 from Methanococcus jannaschii, has been observed to form dimers and tetramers during crystalization, although it is believed to exist primarilly as a tetramer in solution. In addition to its MDH activity, MJ0490 also possesses fructose-1,6-bisphosphate-activated LDH activity. Members of this subgroup have a higher sequence similarity to LDHs than to other MDHs. LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carbox |
| >PRK12475 thiamine/molybdopterin biosynthesis MoeB-like protein; Provisional | Back alignment and domain information |
|---|
Probab=96.00 E-value=0.15 Score=52.45 Aligned_cols=129 Identities=19% Similarity=0.213 Sum_probs=77.1
Q ss_pred hhhhcCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHH----HHHh----h-hhhHHHHHhhhc
Q 010075 6 VVEFLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQ----NEVL----A-KDVFNVLKEKWG 76 (519)
Q Consensus 6 i~~~~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~----~~~~----~-~~~f~~l~~~~~ 76 (519)
-++-+++++|+|.|+ |.+|..+++.|.+.| |.+|.++.+..-..+-..|-. +++. + ...-+++++..|
T Consensus 18 ~Q~~L~~~~VlIiG~-GglGs~va~~La~aG--vg~i~lvD~D~ve~sNL~RQ~l~~~~d~~~g~~Ka~aa~~~l~~inp 94 (338)
T PRK12475 18 GQRKIREKHVLIVGA-GALGAANAEALVRAG--IGKLTIADRDYVEWSNLQRQQLYTEEDAKQKKPKAIAAKEHLRKINS 94 (338)
T ss_pred HHHhhcCCcEEEECC-CHHHHHHHHHHHHcC--CCEEEEEcCCcccccccCccccccHHHccCCccHHHHHHHHHHHHCC
Confidence 356678899999996 669999999999987 478888877652221111100 0000 0 001133444333
Q ss_pred cccccccCCceEEEeccCCCCCCCCChhhhHHHHhcCccEEEEcCccCCccccHHHHHHHhHHHHHHHHHHHHhccCCce
Q 010075 77 TRLNSFISEKITFVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKFDERYDVAFGINTLGVIHLVNFAKKCVKLKV 156 (519)
Q Consensus 77 ~~~~~~~~~~v~~v~gDl~~~~lgls~~~~~~~l~~~vdiViH~Aa~v~f~~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~ 156 (519)
.-+++.+..|++ .... +.+++++|+||.+... .+.-+ .+-++|.+. + ..
T Consensus 95 -------~v~i~~~~~~~~-------~~~~-~~~~~~~DlVid~~D~------~~~r~--------~in~~~~~~-~-ip 143 (338)
T PRK12475 95 -------EVEIVPVVTDVT-------VEEL-EELVKEVDLIIDATDN------FDTRL--------LINDLSQKY-N-IP 143 (338)
T ss_pred -------CcEEEEEeccCC-------HHHH-HHHhcCCCEEEEcCCC------HHHHH--------HHHHHHHHc-C-CC
Confidence 245777888877 3433 4677899999988632 22111 233566664 3 45
Q ss_pred EEEEecceeecC
Q 010075 157 FVHVSTAYVAGE 168 (519)
Q Consensus 157 ~V~vSTa~v~~~ 168 (519)
+|+.+....+|.
T Consensus 144 ~i~~~~~g~~G~ 155 (338)
T PRK12475 144 WIYGGCVGSYGV 155 (338)
T ss_pred EEEEEecccEEE
Confidence 888887766653
|
|
| >cd01485 E1-1_like Ubiquitin activating enzyme (E1), repeat 1-like | Back alignment and domain information |
|---|
Probab=95.94 E-value=0.089 Score=49.74 Aligned_cols=130 Identities=12% Similarity=0.163 Sum_probs=76.8
Q ss_pred hhhcCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHH---H---HHHhh---hhhHHHHHhhhcc
Q 010075 7 VEFLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRF---Q---NEVLA---KDVFNVLKEKWGT 77 (519)
Q Consensus 7 ~~~~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl---~---~~~~~---~~~f~~l~~~~~~ 77 (519)
++-+++.+|+|.|+.| +|..+++.|.+.| |++|+++....-..+-..|. . +++-+ ..+-+++++-.|
T Consensus 14 q~~L~~s~VlviG~gg-lGsevak~L~~~G--Vg~i~lvD~d~ve~snl~rq~~~~~~~~~iG~~Ka~~~~~~L~~lNp- 89 (198)
T cd01485 14 QNKLRSAKVLIIGAGA-LGAEIAKNLVLAG--IDSITIVDHRLVSTEDLGSNFFLDAEVSNSGMNRAAASYEFLQELNP- 89 (198)
T ss_pred HHHHhhCcEEEECCCH-HHHHHHHHHHHcC--CCEEEEEECCcCChhcCcccEecccchhhcCchHHHHHHHHHHHHCC-
Confidence 4556789999999777 9999999999976 58888887654322111110 0 00100 112234555444
Q ss_pred ccccccCCceEEEeccCCCCCCCCChhhhHHHHhcCccEEEEcCccCCccccHHHHHHHhHHHHHHHHHHHHhccCCceE
Q 010075 78 RLNSFISEKITFVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKFDERYDVAFGINTLGVIHLVNFAKKCVKLKVF 157 (519)
Q Consensus 78 ~~~~~~~~~v~~v~gDl~~~~lgls~~~~~~~l~~~vdiViH~Aa~v~f~~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~ 157 (519)
.-+++.+..++.+. .+......+++|+||.+-.. .... ..+-++|++. + ..+
T Consensus 90 ------~v~i~~~~~~~~~~------~~~~~~~~~~~dvVi~~~d~------~~~~--------~~ln~~c~~~-~-ip~ 141 (198)
T cd01485 90 ------NVKLSIVEEDSLSN------DSNIEEYLQKFTLVIATEEN------YERT--------AKVNDVCRKH-H-IPF 141 (198)
T ss_pred ------CCEEEEEecccccc------hhhHHHHHhCCCEEEECCCC------HHHH--------HHHHHHHHHc-C-CCE
Confidence 24566776666521 12223567789999976321 2222 2344677774 4 478
Q ss_pred EEEecceeecC
Q 010075 158 VHVSTAYVAGE 168 (519)
Q Consensus 158 V~vSTa~v~~~ 168 (519)
|+.++...+|.
T Consensus 142 i~~~~~G~~G~ 152 (198)
T cd01485 142 ISCATYGLIGY 152 (198)
T ss_pred EEEEeecCEEE
Confidence 88888777764
|
E1, a highly conserved small protein present universally in eukaryotic cells, is part of cascade to attach ubiquitin (Ub) covalently to substrate proteins. This cascade consists of activating (E1), conjugating (E2), and/or ligating (E3) enzymes and then targets them for degradation by the 26S proteasome. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and ubiquitin's C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. A set of novel molecules with a structural similarity to Ub, called Ub-like proteins (Ubls), have similar conjugation cascades. In contrast to ubiquitin-E1, which is a single-chain protein with a weakly conserved two-fold repeat, many of the Ubls-E1are a heterodimer where each subunit corresponds to one half of a single-chain E1. This CD represents the family homol |
| >PRK05690 molybdopterin biosynthesis protein MoeB; Provisional | Back alignment and domain information |
|---|
Probab=95.92 E-value=0.16 Score=49.70 Aligned_cols=126 Identities=17% Similarity=0.104 Sum_probs=75.4
Q ss_pred hhhcCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHH----HHHHhhhhh----HHHHHhhhccc
Q 010075 7 VEFLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRF----QNEVLAKDV----FNVLKEKWGTR 78 (519)
Q Consensus 7 ~~~~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl----~~~~~~~~~----f~~l~~~~~~~ 78 (519)
++-+++++|+|.|+ |.+|..+++.|.+.| |+++.++....-..+-..|- .+++ ..+. -+++++..|
T Consensus 27 Q~~L~~~~VliiG~-GglGs~va~~La~~G--vg~i~lvD~D~ve~sNL~Rq~l~~~~dv-G~~Ka~~a~~~l~~lnp-- 100 (245)
T PRK05690 27 QEKLKAARVLVVGL-GGLGCAASQYLAAAG--VGTLTLVDFDTVSLSNLQRQVLHDDATI-GQPKVESARAALARINP-- 100 (245)
T ss_pred HHHhcCCeEEEECC-CHHHHHHHHHHHHcC--CCEEEEEcCCEECcchhhhhhcCChhhC-CChHHHHHHHHHHHHCC--
Confidence 45578899999997 889999999999976 67888887655433333331 0011 1111 233444333
Q ss_pred cccccCCceEEEeccCCCCCCCCChhhhHHHHhcCccEEEEcCccCCccccHHHHHHHhHHHHHHHHHHHHhccCCceEE
Q 010075 79 LNSFISEKITFVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKFDERYDVAFGINTLGVIHLVNFAKKCVKLKVFV 158 (519)
Q Consensus 79 ~~~~~~~~v~~v~gDl~~~~lgls~~~~~~~l~~~vdiViH~Aa~v~f~~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V 158 (519)
.-+++.+...++ +.+. ..+++++|+||.+... .+ .-..+-++|.+. + ..+|
T Consensus 101 -----~v~i~~~~~~i~-------~~~~-~~~~~~~DiVi~~~D~------~~--------~r~~ln~~~~~~-~-ip~v 151 (245)
T PRK05690 101 -----HIAIETINARLD-------DDEL-AALIAGHDLVLDCTDN------VA--------TRNQLNRACFAA-K-KPLV 151 (245)
T ss_pred -----CCEEEEEeccCC-------HHHH-HHHHhcCCEEEecCCC------HH--------HHHHHHHHHHHh-C-CEEE
Confidence 245666666665 3333 3677899999998643 11 112344667664 3 4577
Q ss_pred EEecceeec
Q 010075 159 HVSTAYVAG 167 (519)
Q Consensus 159 ~vSTa~v~~ 167 (519)
+.++....|
T Consensus 152 ~~~~~g~~G 160 (245)
T PRK05690 152 SGAAIRMEG 160 (245)
T ss_pred EeeeccCCc
Confidence 766544444
|
|
| >KOG1202 consensus Animal-type fatty acid synthase and related proteins [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=95.92 E-value=0.029 Score=63.94 Aligned_cols=173 Identities=14% Similarity=0.184 Sum_probs=116.0
Q ss_pred hhhhc--CCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccc
Q 010075 6 VVEFL--ENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFI 83 (519)
Q Consensus 6 i~~~~--~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~ 83 (519)
|+..| ..|+.+|+||-|..|-.|+.-|..+|. .++.+..|+.-....+.+.. .++++.
T Consensus 1760 I~rt~~hpeksYii~GGLGGFGLELaqWLi~RGa--r~lVLtSRsGirtGYQa~~v---------rrWr~~--------- 1819 (2376)
T KOG1202|consen 1760 IPRTYCHPEKSYIIVGGLGGFGLELAQWLIQRGA--RKLVLTSRSGIRTGYQALMV---------RRWRRR--------- 1819 (2376)
T ss_pred cchhhcCccceEEEeccccchhHHHHHHHHhcCc--eEEEEeccccchhhHHHHHH---------HHHHhc---------
Confidence 44444 358999999999999999999999884 67888888875544443322 223321
Q ss_pred CCceEEEeccCCCCCCCCChhhhHHHHhc------CccEEEEcCccCCc-------cccHHHHHHHhHHHHHHHHHHHHh
Q 010075 84 SEKITFVPGDISSEDLGLKDSNLKEELWN------ELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKK 150 (519)
Q Consensus 84 ~~~v~~v~gDl~~~~lgls~~~~~~~l~~------~vdiViH~Aa~v~f-------~~~~~~~~~~Nv~gt~~ll~~a~~ 150 (519)
.-+|.+=.-|++. .++.. .+++ -|--|||+|+..+- .+++++..+.-+.||.+|=+.-++
T Consensus 1820 GVqV~vsT~nitt------~~ga~-~Li~~s~kl~~vGGiFnLA~VLRD~LiEnQt~knFk~va~pK~~~Ti~LD~~sRe 1892 (2376)
T KOG1202|consen 1820 GVQVQVSTSNITT------AEGAR-GLIEESNKLGPVGGIFNLAAVLRDGLIENQTPKNFKDVAKPKYSGTINLDRVSRE 1892 (2376)
T ss_pred CeEEEEecccchh------hhhHH-HHHHHhhhcccccchhhHHHHHHhhhhcccChhHHHhhhccceeeeeehhhhhhh
Confidence 1234444556663 33332 4443 37789999998652 244566666778889888777665
Q ss_pred -ccCCceEEEEecceeecCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCc
Q 010075 151 -CVKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPN 229 (519)
Q Consensus 151 -~~~l~~~V~vSTa~v~~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n 229 (519)
|+.++-||..||..+--..- -..
T Consensus 1893 ~C~~LdyFv~FSSvscGRGN~--------------------------------------------------------GQt 1916 (2376)
T KOG1202|consen 1893 ICPELDYFVVFSSVSCGRGNA--------------------------------------------------------GQT 1916 (2376)
T ss_pred hCcccceEEEEEeecccCCCC--------------------------------------------------------ccc
Confidence 56789999999986532211 123
Q ss_pred HHHHHHHHHHHHHHHh-hcCCcEEEEecCcccc
Q 010075 230 TYVFTKTMGEMLMQQS-KENLSLVIIRPTVVSG 261 (519)
Q Consensus 230 ~Y~~sK~~aE~lv~~~-~~~lp~~IvRPs~V~g 261 (519)
.|+.+....|+++.+. ..|+|-+.+.=|.|..
T Consensus 1917 NYG~aNS~MERiceqRr~~GfPG~AiQWGAIGD 1949 (2376)
T KOG1202|consen 1917 NYGLANSAMERICEQRRHEGFPGTAIQWGAIGD 1949 (2376)
T ss_pred ccchhhHHHHHHHHHhhhcCCCcceeeeecccc
Confidence 4999999999999876 6688877777665543
|
|
| >PRK14106 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional | Back alignment and domain information |
|---|
Probab=95.86 E-value=0.046 Score=58.46 Aligned_cols=88 Identities=18% Similarity=0.177 Sum_probs=56.6
Q ss_pred cCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 010075 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (519)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (519)
+++|+|+|+|+++ +|..+++.|++.| .+|++..+.... ...+++ +.+. ...+.+
T Consensus 3 ~~~k~v~iiG~g~-~G~~~A~~l~~~G---~~V~~~d~~~~~-~~~~~~----------~~l~-----------~~~~~~ 56 (450)
T PRK14106 3 LKGKKVLVVGAGV-SGLALAKFLKKLG---AKVILTDEKEED-QLKEAL----------EELG-----------ELGIEL 56 (450)
T ss_pred cCCCEEEEECCCH-HHHHHHHHHHHCC---CEEEEEeCCchH-HHHHHH----------HHHH-----------hcCCEE
Confidence 4689999999888 9999999999999 567777665321 111111 1111 124667
Q ss_pred EeccCCCCCCCCChhhhHHHHhcCccEEEEcCccCCccccHHHHHH
Q 010075 90 VPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKFDERYDVAFG 135 (519)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~~~vdiViH~Aa~v~f~~~~~~~~~ 135 (519)
+.+|..+ ....++|+||++++....+.....+.+
T Consensus 57 ~~~~~~~------------~~~~~~d~vv~~~g~~~~~~~~~~a~~ 90 (450)
T PRK14106 57 VLGEYPE------------EFLEGVDLVVVSPGVPLDSPPVVQAHK 90 (450)
T ss_pred EeCCcch------------hHhhcCCEEEECCCCCCCCHHHHHHHH
Confidence 7888772 234579999999987433333344433
|
|
| >PLN02968 Probable N-acetyl-gamma-glutamyl-phosphate reductase | Back alignment and domain information |
|---|
Probab=95.79 E-value=0.031 Score=58.31 Aligned_cols=37 Identities=19% Similarity=0.354 Sum_probs=30.6
Q ss_pred CCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecC
Q 010075 11 ENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAA 49 (519)
Q Consensus 11 ~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~ 49 (519)
..++|.|.||||++|..|++.|+++ |. .+|..+.+..
T Consensus 37 ~~~kVaIvGATG~vG~eLlrlL~~h-P~-~el~~l~s~~ 73 (381)
T PLN02968 37 EKKRIFVLGASGYTGAEVRRLLANH-PD-FEITVMTADR 73 (381)
T ss_pred cccEEEEECCCChHHHHHHHHHHhC-CC-CeEEEEEChh
Confidence 4568999999999999999988876 65 4788887753
|
|
| >TIGR01759 MalateDH-SF1 malate dehydrogenase | Back alignment and domain information |
|---|
Probab=95.41 E-value=0.17 Score=51.69 Aligned_cols=119 Identities=13% Similarity=0.071 Sum_probs=72.2
Q ss_pred CEEEEeCCccHHHHHHHHHHHHhCCCcc-----EEEEEEecCCcc-cHHHHHHHHHhhhhhHHHHHhhhccccccccCCc
Q 010075 13 KTILVSGVTGFVAKVFIEKILRVQPNVK-----KLYLFVRAADID-SAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEK 86 (519)
Q Consensus 13 k~VlITGaTGFlG~~Lv~~LL~~g~~v~-----~V~~LvR~~~~~-~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~ 86 (519)
.+|.|+||+|++|..++-.|+..+ -+. +++++.+.+... ...+.+ ++.+.. . .. ...
T Consensus 4 ~KV~IIGa~G~VG~~~a~~l~~~~-~~~~~~~~el~L~Di~~~~~~a~g~a~--Dl~~~~--------~-----~~-~~~ 66 (323)
T TIGR01759 4 VRVAVTGAAGQIGYSLLFRIASGE-LFGKDQPVVLHLLDIPPAMKALEGVAM--ELEDCA--------F-----PL-LAG 66 (323)
T ss_pred eEEEEECCCcHHHHHHHHHHHhCC-cccCCCccEEEEEecCCcccccchHHH--HHhhcc--------c-----cc-cCC
Confidence 479999999999999999888754 234 788887754221 111111 111100 0 00 011
Q ss_pred eEEEeccCCCCCCCCChhhhHHHHhcCccEEEEcCccCC-ccccHHHHHHHhHHHHHHHHHHHHhccCCceEEEEec
Q 010075 87 ITFVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITK-FDERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVST 162 (519)
Q Consensus 87 v~~v~gDl~~~~lgls~~~~~~~l~~~vdiViH~Aa~v~-f~~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V~vST 162 (519)
+.+. + .+. ..+.+.|+||-+||..+ ..++..+.+..|+.-.+.+.+.+++......++.+-|
T Consensus 67 ~~i~-~-----------~~~--~~~~daDvVVitAG~~~k~g~tR~dll~~Na~i~~~i~~~i~~~~~~~~iiivvs 129 (323)
T TIGR01759 67 VVAT-T-----------DPE--EAFKDVDAALLVGAFPRKPGMERADLLSKNGKIFKEQGKALNKVAKKDVKVLVVG 129 (323)
T ss_pred cEEe-c-----------ChH--HHhCCCCEEEEeCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHhhCCCCeEEEEeC
Confidence 1111 1 111 44578999999999854 3467778899999999999988888632144444433
|
This model represents a family of malate dehydrogenases in bacteria and eukaryotes which utilize either NAD or NADP depending on the species and context. MDH interconverts malate and oxaloacetate and is a part of the citric acid cycle as well as the C4 cycle in certain photosynthetic organisms. |
| >PF00899 ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-activating enzyme (E1 enzyme) [, ] activates ubiquitin by first adenylating with ATP its C-terminal glycine residue and thereafter linking this residue to the side chain of a cysteine residue in E1, yielding an ubiquitin-E1 thiolester and free AMP | Back alignment and domain information |
|---|
Probab=95.33 E-value=0.58 Score=41.10 Aligned_cols=122 Identities=21% Similarity=0.274 Sum_probs=70.7
Q ss_pred CCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHH--H-HH-HHhh---hhhHHHHHhhhccccccccC
Q 010075 12 NKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALR--F-QN-EVLA---KDVFNVLKEKWGTRLNSFIS 84 (519)
Q Consensus 12 ~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~r--l-~~-~~~~---~~~f~~l~~~~~~~~~~~~~ 84 (519)
+++|+|.| .|.+|+.+++.|.+.| +.++.+.....-..+-..| + .. ++-. ..+-+.+++..| .
T Consensus 2 ~~~v~iiG-~G~vGs~va~~L~~~G--v~~i~lvD~d~v~~~nl~r~~~~~~~~vG~~Ka~~~~~~l~~~np-------~ 71 (135)
T PF00899_consen 2 NKRVLIIG-AGGVGSEVAKNLARSG--VGKITLVDDDIVEPSNLNRQFLYTEEDVGKNKAEAAKERLQEINP-------D 71 (135)
T ss_dssp T-EEEEES-TSHHHHHHHHHHHHHT--TSEEEEEESSBB-GGGCCTCTTS-GGGTTSBHHHHHHHHHHHHST-------T
T ss_pred CCEEEEEC-cCHHHHHHHHHHHHhC--CCceeecCCcceeecccccccccccccchhHHHHHHHHHHHHhcC-------c
Confidence 57899998 5779999999999987 4788877653321110000 0 00 0000 001123344333 2
Q ss_pred CceEEEeccCCCCCCCCChhhhHHHHhcCccEEEEcCccCCccccHHHHHHHhHHHHHHHHHHHHhccCCceEEEEecce
Q 010075 85 EKITFVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKFDERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAY 164 (519)
Q Consensus 85 ~~v~~v~gDl~~~~lgls~~~~~~~l~~~vdiViH~Aa~v~f~~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V~vSTa~ 164 (519)
-+++.+..+++ +... ..++++.|+||.|... ......+-+.|++. + +.+|+.++..
T Consensus 72 ~~v~~~~~~~~-------~~~~-~~~~~~~d~vi~~~d~--------------~~~~~~l~~~~~~~-~-~p~i~~~~~g 127 (135)
T PF00899_consen 72 VEVEAIPEKID-------EENI-EELLKDYDIVIDCVDS--------------LAARLLLNEICREY-G-IPFIDAGVNG 127 (135)
T ss_dssp SEEEEEESHCS-------HHHH-HHHHHTSSEEEEESSS--------------HHHHHHHHHHHHHT-T--EEEEEEEET
T ss_pred eeeeeeecccc-------cccc-cccccCCCEEEEecCC--------------HHHHHHHHHHHHHc-C-CCEEEEEeec
Confidence 56778888885 4444 4677899999998643 12223455677774 3 4688888765
Q ss_pred eec
Q 010075 165 VAG 167 (519)
Q Consensus 165 v~~ 167 (519)
.+|
T Consensus 128 ~~G 130 (135)
T PF00899_consen 128 FYG 130 (135)
T ss_dssp TEE
T ss_pred CEE
Confidence 554
|
Later the ubiquitin moiety is transferred to a cysteine residue on one of the many forms of ubiquitin- conjugating enzymes (E2). The family of ubiquitin-activating enzymes shares in its catalytic domain significant similarity with a large family of NAD/FAD-binding proteins. This domain is based on the common NAD/FAD-binding fold and finds members of several families, including UBA ubiquitin activating enzymes; the hesA/moeB/thiF family; NADH peroxidases; the LDH family; sarcosin oxidase; phytoene dehydrogenases; alanine dehydrogenases; hydroxyacyl-CoA dehydrogenases and many other NAD/FAD dependent dehydrogenases and oxidases.; GO: 0003824 catalytic activity; PDB: 1ZKM_D 1ZUD_3 1ZFN_D 1R4M_G 2NVU_A 1R4N_C 3DBR_A 3DBH_C 3DBL_G 1YOV_A .... |
| >PF01488 Shikimate_DH: Shikimate / quinate 5-dehydrogenase; InterPro: IPR006151 This entry represents a domain found in shikimate and quinate dehydrogenases, as well as glutamyl-tRNA reductases | Back alignment and domain information |
|---|
Probab=95.28 E-value=0.052 Score=47.94 Aligned_cols=38 Identities=24% Similarity=0.342 Sum_probs=33.2
Q ss_pred hcCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecC
Q 010075 9 FLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAA 49 (519)
Q Consensus 9 ~~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~ 49 (519)
-+++++|+|.|| |..|+.++..|...|. .+|++..|+.
T Consensus 9 ~l~~~~vlviGa-Gg~ar~v~~~L~~~g~--~~i~i~nRt~ 46 (135)
T PF01488_consen 9 DLKGKRVLVIGA-GGAARAVAAALAALGA--KEITIVNRTP 46 (135)
T ss_dssp TGTTSEEEEESS-SHHHHHHHHHHHHTTS--SEEEEEESSH
T ss_pred CcCCCEEEEECC-HHHHHHHHHHHHHcCC--CEEEEEECCH
Confidence 468999999996 8899999999999864 7899999974
|
Shikimate 5-dehydrogenase (1.1.1.25 from EC) catalyses the conversion of shikimate to 5-dehydroshikimate [, ]. This reaction is part of the shikimate pathway which is involved in the biosynthesis of aromatic amino acids []. Quinate 5-dehydrogenase catalyses the conversion of quinate to 5-dehydroquinate. This reaction is part of the quinate pathway where quinic acid is exploited as a source of carbon in prokaryotes and microbial eukaryotes. Both the shikimate and quinate pathways share two common pathway metabolites, 3-dehydroquinate and dehydroshikimate. Glutamyl-tRNA reductase (1.2.1.70 from EC) catalyzes the first step of tetrapyrrole biosynthesis in plants, archaea and most bacteria. The dimeric enzyme has an unusual V-shaped architecture where each monomer consists of three domains linked by a long 'spinal' alpha-helix. The central catalytic domain specifically recognises the glutamate moiety of the substrate []. ; PDB: 2EV9_B 2CY0_B 1WXD_A 2D5C_A 1NVT_B 2EGG_A 3PWZ_A 3DOO_A 3DON_A 3FBT_C .... |
| >TIGR02355 moeB molybdopterin synthase sulfurylase MoeB | Back alignment and domain information |
|---|
Probab=95.20 E-value=0.34 Score=47.23 Aligned_cols=127 Identities=19% Similarity=0.127 Sum_probs=75.1
Q ss_pred hhhcCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHH----HHHhhh---hhHHHHHhhhcccc
Q 010075 7 VEFLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQ----NEVLAK---DVFNVLKEKWGTRL 79 (519)
Q Consensus 7 ~~~~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~----~~~~~~---~~f~~l~~~~~~~~ 79 (519)
++-+++.+|+|.| .|.+|..+++.|.+.| |.+++++....-..+-..|-. +++-.+ ..-+++++..|
T Consensus 19 q~~L~~~~VlvvG-~GglGs~va~~La~~G--vg~i~lvD~D~ve~sNL~RQ~l~~~~diG~~Ka~~a~~~l~~inp--- 92 (240)
T TIGR02355 19 QEALKASRVLIVG-LGGLGCAASQYLAAAG--VGNLTLLDFDTVSLSNLQRQVLHSDANIGQPKVESAKDALTQINP--- 92 (240)
T ss_pred HHHHhCCcEEEEC-cCHHHHHHHHHHHHcC--CCEEEEEeCCcccccCcccceeeeHhhCCCcHHHHHHHHHHHHCC---
Confidence 5667889999998 5779999999999976 688888776553332222210 011110 01234444443
Q ss_pred ccccCCceEEEeccCCCCCCCCChhhhHHHHhcCccEEEEcCccCCccccHHHHHHHhHHHHHHHHHHHHhccCCceEEE
Q 010075 80 NSFISEKITFVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKFDERYDVAFGINTLGVIHLVNFAKKCVKLKVFVH 159 (519)
Q Consensus 80 ~~~~~~~v~~v~gDl~~~~lgls~~~~~~~l~~~vdiViH~Aa~v~f~~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V~ 159 (519)
.-+++.+...++ ..+. ..++++.|+||.+... .+. ...+-++|.+. + ..+|+
T Consensus 93 ----~v~i~~~~~~i~-------~~~~-~~~~~~~DlVvd~~D~------~~~--------r~~ln~~~~~~-~-ip~v~ 144 (240)
T TIGR02355 93 ----HIAINPINAKLD-------DAEL-AALIAEHDIVVDCTDN------VEV--------RNQLNRQCFAA-K-VPLVS 144 (240)
T ss_pred ----CcEEEEEeccCC-------HHHH-HHHhhcCCEEEEcCCC------HHH--------HHHHHHHHHHc-C-CCEEE
Confidence 234566655554 3333 4677899999998643 111 22344667664 3 46777
Q ss_pred Eecceeec
Q 010075 160 VSTAYVAG 167 (519)
Q Consensus 160 vSTa~v~~ 167 (519)
.|+...+|
T Consensus 145 ~~~~g~~G 152 (240)
T TIGR02355 145 GAAIRMEG 152 (240)
T ss_pred EEecccEe
Confidence 76655444
|
This model describes the molybdopterin biosynthesis protein MoeB in E. coli and related species. The enzyme covalently modifies the molybdopterin synthase MoaD by sulfurylation. This enzyme is closely related to ThiF, a thiamine biosynthesis enzyme that modifies ThiS by an analogous adenylation. Both MoeB and ThiF belong to the HesA/MoeB/ThiF family (pfam00899). |
| >COG3268 Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=95.17 E-value=0.04 Score=55.13 Aligned_cols=85 Identities=16% Similarity=0.242 Sum_probs=53.0
Q ss_pred CEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEEec
Q 010075 13 KTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVPG 92 (519)
Q Consensus 13 k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v~g 92 (519)
..+.|-|||||.|+.++|.|.+++.. -.+-.|+. ... ++++++.+..+ ...
T Consensus 7 ~d~iiYGAtGy~G~lvae~l~~~g~~---~aLAgRs~---~kl-------------~~l~~~LG~~~--------~~~-- 57 (382)
T COG3268 7 YDIIIYGATGYAGGLVAEYLAREGLT---AALAGRSS---AKL-------------DALRASLGPEA--------AVF-- 57 (382)
T ss_pred eeEEEEccccchhHHHHHHHHHcCCc---hhhccCCH---HHH-------------HHHHHhcCccc--------ccc--
Confidence 36899999999999999999998843 34444542 122 23344333221 111
Q ss_pred cCCCCCCCCChhhhHHHHhcCccEEEEcCccCC-ccccHHHH
Q 010075 93 DISSEDLGLKDSNLKEELWNELDIMVNSAAITK-FDERYDVA 133 (519)
Q Consensus 93 Dl~~~~lgls~~~~~~~l~~~vdiViH~Aa~v~-f~~~~~~~ 133 (519)
++. .++..+++++.+.+|+||+|... ..+++-.+
T Consensus 58 p~~-------~p~~~~~~~~~~~VVlncvGPyt~~g~plv~a 92 (382)
T COG3268 58 PLG-------VPAALEAMASRTQVVLNCVGPYTRYGEPLVAA 92 (382)
T ss_pred CCC-------CHHHHHHHHhcceEEEeccccccccccHHHHH
Confidence 111 24445688899999999999743 34555444
|
|
| >TIGR02356 adenyl_thiF thiazole biosynthesis adenylyltransferase ThiF, E | Back alignment and domain information |
|---|
Probab=95.13 E-value=0.39 Score=45.55 Aligned_cols=128 Identities=15% Similarity=0.120 Sum_probs=75.8
Q ss_pred hhhcCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHH----HHHhh---hhhHHHHHhhhcccc
Q 010075 7 VEFLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQ----NEVLA---KDVFNVLKEKWGTRL 79 (519)
Q Consensus 7 ~~~~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~----~~~~~---~~~f~~l~~~~~~~~ 79 (519)
++-+++++|+|.| .|.+|..+++.|.+.| |+++.++.+..-..+-..|-. +++-+ ...-+++++..|
T Consensus 16 q~kl~~~~VlviG-~GglGs~ia~~La~~G--v~~i~lvD~d~ve~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np--- 89 (202)
T TIGR02356 16 QQRLLNSHVLIIG-AGGLGSPAALYLAGAG--VGTIVIVDDDHVDLSNLQRQILFTEEDVGRPKVEVAAQRLRELNS--- 89 (202)
T ss_pred HHHhcCCCEEEEC-CCHHHHHHHHHHHHcC--CCeEEEecCCEEcccchhhhhccChhhCCChHHHHHHHHHHHhCC---
Confidence 5667889999998 6789999999999986 578888877643322222210 00000 011223333333
Q ss_pred ccccCCceEEEeccCCCCCCCCChhhhHHHHhcCccEEEEcCccCCccccHHHHHHHhHHHHHHHHHHHHhccCCceEEE
Q 010075 80 NSFISEKITFVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKFDERYDVAFGINTLGVIHLVNFAKKCVKLKVFVH 159 (519)
Q Consensus 80 ~~~~~~~v~~v~gDl~~~~lgls~~~~~~~l~~~vdiViH~Aa~v~f~~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V~ 159 (519)
.-+++.+...+. +++. ..++++.|+||.+... ++. -..+-++|++. + +.+|+
T Consensus 90 ----~v~i~~~~~~i~-------~~~~-~~~~~~~D~Vi~~~d~------~~~--------r~~l~~~~~~~-~-ip~i~ 141 (202)
T TIGR02356 90 ----DIQVTALKERVT-------AENL-ELLINNVDLVLDCTDN------FAT--------RYLINDACVAL-G-TPLIS 141 (202)
T ss_pred ----CCEEEEehhcCC-------HHHH-HHHHhCCCEEEECCCC------HHH--------HHHHHHHHHHc-C-CCEEE
Confidence 135556665655 3333 3667899999988643 221 12344667764 3 46888
Q ss_pred EecceeecC
Q 010075 160 VSTAYVAGE 168 (519)
Q Consensus 160 vSTa~v~~~ 168 (519)
.++...+|.
T Consensus 142 ~~~~g~~G~ 150 (202)
T TIGR02356 142 AAVVGFGGQ 150 (202)
T ss_pred EEeccCeEE
Confidence 887665553
|
coli subfamily. Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with the Escherichia. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the more widely distributed clade of ThiF proteins such found in E. coli. |
| >cd00757 ThiF_MoeB_HesA_family ThiF_MoeB_HesA | Back alignment and domain information |
|---|
Probab=95.12 E-value=0.2 Score=48.44 Aligned_cols=128 Identities=20% Similarity=0.118 Sum_probs=74.5
Q ss_pred hhhcCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHH----HHHHhh---hhhHHHHHhhhcccc
Q 010075 7 VEFLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRF----QNEVLA---KDVFNVLKEKWGTRL 79 (519)
Q Consensus 7 ~~~~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl----~~~~~~---~~~f~~l~~~~~~~~ 79 (519)
++-+++++|+|.| .|.+|..+++.|.+.| |+++.+.....-..+-..|- .+++-+ ..+-+++++..|
T Consensus 16 q~~L~~~~VlivG-~GglGs~va~~La~~G--vg~i~lvD~D~ve~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np--- 89 (228)
T cd00757 16 QEKLKNARVLVVG-AGGLGSPAAEYLAAAG--VGKLGLVDDDVVELSNLQRQILHTEADVGQPKAEAAAERLRAINP--- 89 (228)
T ss_pred HHHHhCCcEEEEC-CCHHHHHHHHHHHHcC--CCEEEEEcCCEEcCcccccccccChhhCCChHHHHHHHHHHHhCC---
Confidence 5567889999998 6779999999999987 57787774433211111110 000100 011233444333
Q ss_pred ccccCCceEEEeccCCCCCCCCChhhhHHHHhcCccEEEEcCccCCccccHHHHHHHhHHHHHHHHHHHHhccCCceEEE
Q 010075 80 NSFISEKITFVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKFDERYDVAFGINTLGVIHLVNFAKKCVKLKVFVH 159 (519)
Q Consensus 80 ~~~~~~~v~~v~gDl~~~~lgls~~~~~~~l~~~vdiViH~Aa~v~f~~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V~ 159 (519)
.-+++.+..+++ .++. ..+++++|+||.|.... + .-..+-++|.+. + ..+|+
T Consensus 90 ----~~~i~~~~~~i~-------~~~~-~~~~~~~DvVi~~~d~~------~--------~r~~l~~~~~~~-~-ip~i~ 141 (228)
T cd00757 90 ----DVEIEAYNERLD-------AENA-EELIAGYDLVLDCTDNF------A--------TRYLINDACVKL-G-KPLVS 141 (228)
T ss_pred ----CCEEEEecceeC-------HHHH-HHHHhCCCEEEEcCCCH------H--------HHHHHHHHHHHc-C-CCEEE
Confidence 135666766665 3333 36778899999986541 1 112355677764 3 56888
Q ss_pred EecceeecC
Q 010075 160 VSTAYVAGE 168 (519)
Q Consensus 160 vSTa~v~~~ 168 (519)
.++....|.
T Consensus 142 ~g~~g~~g~ 150 (228)
T cd00757 142 GAVLGFEGQ 150 (228)
T ss_pred EEeccCEEE
Confidence 877655553
|
Family of E1-like enzymes involved in molybdopterin and thiamine biosynthesis family. The common reaction mechanism catalyzed by MoeB and ThiF, like other E1 enzymes, begins with a nucleophilic attack of the C-terminal carboxylate of MoaD and ThiS, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS. MoeB, as the MPT synthase (MoaE/MoaD complex) sulfurase, is involved in the biosynthesis of the molybdenum cofactor, a derivative of the tricyclic pterin, molybdopterin (MPT). ThiF catalyzes the adenylation of ThiS, as part of the biosynthesis pathway of thiamin pyrophosphate (vitamin B1). |
| >PRK05597 molybdopterin biosynthesis protein MoeB; Validated | Back alignment and domain information |
|---|
Probab=95.01 E-value=0.26 Score=50.97 Aligned_cols=128 Identities=13% Similarity=0.009 Sum_probs=76.7
Q ss_pred hhhcCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHH----HHHHhhh---hhHHHHHhhhcccc
Q 010075 7 VEFLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRF----QNEVLAK---DVFNVLKEKWGTRL 79 (519)
Q Consensus 7 ~~~~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl----~~~~~~~---~~f~~l~~~~~~~~ 79 (519)
++-+++++|+|.|+ |.+|..+++.|.+.| |+++.++....-..+-..|- .+.+-.+ ..-+++++..|
T Consensus 23 q~~L~~~~VlivG~-GGlGs~~a~~La~~G--vg~i~lvD~D~ve~sNL~Rq~l~~~~diG~~Ka~~a~~~l~~~np--- 96 (355)
T PRK05597 23 QQSLFDAKVAVIGA-GGLGSPALLYLAGAG--VGHITIIDDDTVDLSNLHRQVIHSTAGVGQPKAESAREAMLALNP--- 96 (355)
T ss_pred HHHHhCCeEEEECC-CHHHHHHHHHHHHcC--CCeEEEEeCCEEcccccccCcccChhHCCChHHHHHHHHHHHHCC---
Confidence 45578899999996 779999999999876 57888877654222222210 0001000 01234444444
Q ss_pred ccccCCceEEEeccCCCCCCCCChhhhHHHHhcCccEEEEcCccCCccccHHHHHHHhHHHHHHHHHHHHhccCCceEEE
Q 010075 80 NSFISEKITFVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKFDERYDVAFGINTLGVIHLVNFAKKCVKLKVFVH 159 (519)
Q Consensus 80 ~~~~~~~v~~v~gDl~~~~lgls~~~~~~~l~~~vdiViH~Aa~v~f~~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V~ 159 (519)
.-+++.+...++ .++. ..+++++|+||.|... +. .-..+-++|.+. + ..||+
T Consensus 97 ----~v~v~~~~~~i~-------~~~~-~~~~~~~DvVvd~~d~------~~--------~r~~~n~~c~~~-~-ip~v~ 148 (355)
T PRK05597 97 ----DVKVTVSVRRLT-------WSNA-LDELRDADVILDGSDN------FD--------TRHLASWAAARL-G-IPHVW 148 (355)
T ss_pred ----CcEEEEEEeecC-------HHHH-HHHHhCCCEEEECCCC------HH--------HHHHHHHHHHHc-C-CCEEE
Confidence 245677777776 4443 3667899999999743 11 111234566664 3 46888
Q ss_pred EecceeecC
Q 010075 160 VSTAYVAGE 168 (519)
Q Consensus 160 vSTa~v~~~ 168 (519)
.++....|.
T Consensus 149 ~~~~g~~g~ 157 (355)
T PRK05597 149 ASILGFDAQ 157 (355)
T ss_pred EEEecCeEE
Confidence 877665553
|
|
| >TIGR01296 asd_B aspartate-semialdehyde dehydrogenase (peptidoglycan organisms) | Back alignment and domain information |
|---|
Probab=94.84 E-value=0.043 Score=56.43 Aligned_cols=36 Identities=19% Similarity=0.317 Sum_probs=29.8
Q ss_pred EEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecC
Q 010075 14 TILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAA 49 (519)
Q Consensus 14 ~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~ 49 (519)
+|+|.||||++|..|++.|.++++.+.++..+.+..
T Consensus 1 ~VaIvGAtG~vG~eLi~lL~~~~hp~~~l~~~as~~ 36 (339)
T TIGR01296 1 NVAIVGATGAVGQEMLKILEERNFPIDKLVLLASDR 36 (339)
T ss_pred CEEEEcCCCHHHHHHHHHHHhCCCChhhEEEEeccc
Confidence 489999999999999999988766666777776654
|
Two closely related families of aspartate-semialdehyde dehydrogenase are found. They differ by a deep split in phylogenetic and percent identity trees and in gap patterns. This model represents a branch more closely related to the USG-1 protein than to the other aspartate-semialdehyde dehydrogenases represented in model TIGR00978. |
| >TIGR01850 argC N-acetyl-gamma-glutamyl-phosphate reductase, common form | Back alignment and domain information |
|---|
Probab=94.81 E-value=0.12 Score=53.35 Aligned_cols=31 Identities=16% Similarity=0.504 Sum_probs=25.1
Q ss_pred CEEEEeCCccHHHHHHHHHHHHhCCCccEEEEE
Q 010075 13 KTILVSGVTGFVAKVFIEKILRVQPNVKKLYLF 45 (519)
Q Consensus 13 k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~L 45 (519)
++|.|.||||++|..+++.|++ .|.+ ++..+
T Consensus 1 ~kVaIiGATG~vG~ellr~L~~-hP~~-el~~l 31 (346)
T TIGR01850 1 IKVAIVGASGYTGGELLRLLLN-HPEV-EITYL 31 (346)
T ss_pred CEEEEECCCCHHHHHHHHHHHc-CCCc-eEEEE
Confidence 4799999999999999999986 4665 55533
|
This model represents the more common of two related families of N-acetyl-gamma-glutamyl-phosphate reductase, an enzyme catalyzing the third step or Arg biosynthesis from Glu. The two families differ by phylogeny, similarity clustering, and the gap architecture in a multiple sequence alignment. Bacterial members of this family tend to be found within Arg biosynthesis operons. |
| >PRK15116 sulfur acceptor protein CsdL; Provisional | Back alignment and domain information |
|---|
Probab=94.71 E-value=0.48 Score=46.91 Aligned_cols=123 Identities=15% Similarity=0.162 Sum_probs=68.3
Q ss_pred hhcCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHH-H---HHHHhh---hhhHHHHHhhhccccc
Q 010075 8 EFLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALR-F---QNEVLA---KDVFNVLKEKWGTRLN 80 (519)
Q Consensus 8 ~~~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~r-l---~~~~~~---~~~f~~l~~~~~~~~~ 80 (519)
+-+++.+|+|.| .|.+|+++++.|.+.| |.+|.++....-..+-..| + .+.+-. ..+-+++++-.|
T Consensus 26 ~kL~~s~VlVvG-~GGVGs~vae~Lar~G--Vg~itLiD~D~V~~sNlnRQ~~~~~~~vG~~Kve~~~~rl~~INP---- 98 (268)
T PRK15116 26 QLFADAHICVVG-IGGVGSWAAEALARTG--IGAITLIDMDDVCVTNTNRQIHALRDNVGLAKAEVMAERIRQINP---- 98 (268)
T ss_pred HHhcCCCEEEEC-cCHHHHHHHHHHHHcC--CCEEEEEeCCEecccccccccccChhhcChHHHHHHHHHHHhHCC----
Confidence 446789999998 5779999999999987 5788877654322211111 0 000000 011233443333
Q ss_pred cccCCceEEEeccCCCCCCCCChhhhHHHHh-cCccEEEEcCccCCccccHHHHHHHhHHHHHHHHHHHHhccCCceEEE
Q 010075 81 SFISEKITFVPGDISSEDLGLKDSNLKEELW-NELDIMVNSAAITKFDERYDVAFGINTLGVIHLVNFAKKCVKLKVFVH 159 (519)
Q Consensus 81 ~~~~~~v~~v~gDl~~~~lgls~~~~~~~l~-~~vdiViH~Aa~v~f~~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V~ 159 (519)
.-+++.+..-++ .+.. ..++ .++|+||.+.... ..-..|.+.|++. + ..||.
T Consensus 99 ---~~~V~~i~~~i~-------~e~~-~~ll~~~~D~VIdaiD~~--------------~~k~~L~~~c~~~-~-ip~I~ 151 (268)
T PRK15116 99 ---ECRVTVVDDFIT-------PDNV-AEYMSAGFSYVIDAIDSV--------------RPKAALIAYCRRN-K-IPLVT 151 (268)
T ss_pred ---CcEEEEEecccC-------hhhH-HHHhcCCCCEEEEcCCCH--------------HHHHHHHHHHHHc-C-CCEEE
Confidence 235555544333 3333 2444 4799999886541 2223467778774 4 34665
Q ss_pred Eecce
Q 010075 160 VSTAY 164 (519)
Q Consensus 160 vSTa~ 164 (519)
+..+.
T Consensus 152 ~gGag 156 (268)
T PRK15116 152 TGGAG 156 (268)
T ss_pred ECCcc
Confidence 55444
|
|
| >PRK00066 ldh L-lactate dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=94.65 E-value=0.71 Score=46.99 Aligned_cols=107 Identities=12% Similarity=0.102 Sum_probs=69.4
Q ss_pred CCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEE
Q 010075 11 ENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFV 90 (519)
Q Consensus 11 ~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v 90 (519)
++++|.|+|| |.+|..++-.|+..+ -+.+++++.+.......... ++.+.. .+. .++...
T Consensus 5 ~~~ki~iiGa-G~vG~~~a~~l~~~~-~~~el~L~D~~~~~~~g~~~---Dl~~~~--------------~~~-~~~~i~ 64 (315)
T PRK00066 5 QHNKVVLVGD-GAVGSSYAYALVNQG-IADELVIIDINKEKAEGDAM---DLSHAV--------------PFT-SPTKIY 64 (315)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHhcC-CCCEEEEEeCCCchhHHHHH---HHHhhc--------------ccc-CCeEEE
Confidence 4689999998 999999999888764 34578888886543222111 111110 011 222222
Q ss_pred eccCCCCCCCCChhhhHHHHhcCccEEEEcCccCCc-cccHHHHHHHhHHHHHHHHHHHHhc
Q 010075 91 PGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF-DERYDVAFGINTLGVIHLVNFAKKC 151 (519)
Q Consensus 91 ~gDl~~~~lgls~~~~~~~l~~~vdiViH~Aa~v~f-~~~~~~~~~~Nv~gt~~ll~~a~~~ 151 (519)
.+| . +.+++.|+||-+|+..+- ..+....+..|..-.+.+++..++.
T Consensus 65 ~~~------------~--~~~~~adivIitag~~~k~g~~R~dll~~N~~i~~~i~~~i~~~ 112 (315)
T PRK00066 65 AGD------------Y--SDCKDADLVVITAGAPQKPGETRLDLVEKNLKIFKSIVGEVMAS 112 (315)
T ss_pred eCC------------H--HHhCCCCEEEEecCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHh
Confidence 222 1 234789999999998543 4566777999999999988888775
|
|
| >cd00755 YgdL_like Family of activating enzymes (E1) of ubiquitin-like proteins related to the E | Back alignment and domain information |
|---|
Probab=94.63 E-value=0.53 Score=45.59 Aligned_cols=124 Identities=20% Similarity=0.147 Sum_probs=71.7
Q ss_pred hhhcCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHH----HHHhh---hhhHHHHHhhhcccc
Q 010075 7 VEFLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQ----NEVLA---KDVFNVLKEKWGTRL 79 (519)
Q Consensus 7 ~~~~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~----~~~~~---~~~f~~l~~~~~~~~ 79 (519)
++-+++.+|+|.| .|.+|+++++.|.+.| |.+++++....-..+-..|.. +.+-+ ..+-+++++-.|
T Consensus 6 ~~~L~~~~VlVvG-~GGvGs~va~~Lar~G--Vg~i~LvD~D~V~~sNlnRq~~~~~~diG~~Kae~~~~~l~~inP--- 79 (231)
T cd00755 6 LEKLRNAHVAVVG-LGGVGSWAAEALARSG--VGKLTLIDFDVVCVSNLNRQIHALLSTVGKPKVEVMAERIRDINP--- 79 (231)
T ss_pred HHHHhCCCEEEEC-CCHHHHHHHHHHHHcC--CCEEEEECCCEECchhhcchhCcChhhCCCcHHHHHHHHHHHHCC---
Confidence 4557789999998 5779999999999987 578888765442222222210 01100 011234444444
Q ss_pred ccccCCceEEEeccCCCCCCCCChhhhHHHHh-cCccEEEEcCccCCccccHHHHHHHhHHHHHHHHHHHHhccCCceEE
Q 010075 80 NSFISEKITFVPGDISSEDLGLKDSNLKEELW-NELDIMVNSAAITKFDERYDVAFGINTLGVIHLVNFAKKCVKLKVFV 158 (519)
Q Consensus 80 ~~~~~~~v~~v~gDl~~~~lgls~~~~~~~l~-~~vdiViH~Aa~v~f~~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V 158 (519)
.-+++.+...++ .+... .+. .++|+||.+... +.....+.++|.+. + ..||
T Consensus 80 ----~~~V~~~~~~i~-------~~~~~-~l~~~~~D~VvdaiD~--------------~~~k~~L~~~c~~~-~-ip~I 131 (231)
T cd00755 80 ----ECEVDAVEEFLT-------PDNSE-DLLGGDPDFVVDAIDS--------------IRAKVALIAYCRKR-K-IPVI 131 (231)
T ss_pred ----CcEEEEeeeecC-------HhHHH-HHhcCCCCEEEEcCCC--------------HHHHHHHHHHHHHh-C-CCEE
Confidence 246777777766 33332 343 469999998643 12233466788774 4 3465
Q ss_pred EEecce
Q 010075 159 HVSTAY 164 (519)
Q Consensus 159 ~vSTa~ 164 (519)
...+++
T Consensus 132 ~s~g~g 137 (231)
T cd00755 132 SSMGAG 137 (231)
T ss_pred EEeCCc
Confidence 554443
|
coli hypothetical protein ygdL. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown. |
| >PRK05442 malate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=94.61 E-value=0.47 Score=48.49 Aligned_cols=119 Identities=11% Similarity=0.073 Sum_probs=71.2
Q ss_pred CCEEEEeCCccHHHHHHHHHHHHhCCCcc-----EEEEEEecCCcc-cHHHHHHHHHhhhhhHHHHHhhhccccccccCC
Q 010075 12 NKTILVSGVTGFVAKVFIEKILRVQPNVK-----KLYLFVRAADID-SAALRFQNEVLAKDVFNVLKEKWGTRLNSFISE 85 (519)
Q Consensus 12 ~k~VlITGaTGFlG~~Lv~~LL~~g~~v~-----~V~~LvR~~~~~-~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~ 85 (519)
.++|.|+||+|.+|..++-.|+..+- .. ++.++.+.+... ...+.+ ++.+.. . .+ ..
T Consensus 4 ~~KV~IiGaaG~VG~~~a~~l~~~~~-~~~~~~~el~LiDi~~~~~~~~g~a~--Dl~~~~--------~-----~~-~~ 66 (326)
T PRK05442 4 PVRVAVTGAAGQIGYSLLFRIASGDM-LGKDQPVILQLLEIPPALKALEGVVM--ELDDCA--------F-----PL-LA 66 (326)
T ss_pred CcEEEEECCCcHHHHHHHHHHHhhhh-cCCCCccEEEEEecCCcccccceeeh--hhhhhh--------h-----hh-cC
Confidence 36899999999999999998886432 23 677777754211 000000 111100 0 00 01
Q ss_pred ceEEEeccCCCCCCCCChhhhHHHHhcCccEEEEcCccCC-ccccHHHHHHHhHHHHHHHHHHHHhccCCce-EEEEe
Q 010075 86 KITFVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITK-FDERYDVAFGINTLGVIHLVNFAKKCVKLKV-FVHVS 161 (519)
Q Consensus 86 ~v~~v~gDl~~~~lgls~~~~~~~l~~~vdiViH~Aa~v~-f~~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~-~V~vS 161 (519)
.+.+. ..+. +.+.+.|+||-+||..+ ..++..+.+..|+.-.+++.+..++..+... ++.+|
T Consensus 67 ~~~i~------------~~~y--~~~~daDiVVitaG~~~k~g~tR~dll~~Na~i~~~i~~~i~~~~~~~~iiivvs 130 (326)
T PRK05442 67 GVVIT------------DDPN--VAFKDADVALLVGARPRGPGMERKDLLEANGAIFTAQGKALNEVAARDVKVLVVG 130 (326)
T ss_pred CcEEe------------cChH--HHhCCCCEEEEeCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEeC
Confidence 12111 1111 44578999999999754 3467778899999999999988888433333 44444
|
|
| >PLN02383 aspartate semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=94.59 E-value=0.083 Score=54.36 Aligned_cols=38 Identities=21% Similarity=0.337 Sum_probs=30.0
Q ss_pred CCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEec
Q 010075 11 ENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRA 48 (519)
Q Consensus 11 ~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~ 48 (519)
...+|+|.||||++|..|++.|.++++.+.++..+...
T Consensus 6 ~~~kVaVvGAtG~vG~eLlrlL~~~~hP~~~l~~las~ 43 (344)
T PLN02383 6 NGPSVAIVGVTGAVGQEFLSVLTDRDFPYSSLKMLASA 43 (344)
T ss_pred CCCeEEEEcCCChHHHHHHHHHHhCCCCcceEEEEEcc
Confidence 35789999999999999999998876555567666443
|
|
| >cd01337 MDH_glyoxysomal_mitochondrial Glyoxysomal and mitochondrial malate dehydrogenases | Back alignment and domain information |
|---|
Probab=94.55 E-value=0.67 Score=46.97 Aligned_cols=112 Identities=21% Similarity=0.173 Sum_probs=69.8
Q ss_pred CEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEEec
Q 010075 13 KTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVPG 92 (519)
Q Consensus 13 k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v~g 92 (519)
++|.|+||||.+|+.++-.|+..+ -+.++.++...+ .......|.+ .. ...++....+
T Consensus 1 ~KI~IIGaaG~VG~~~a~~l~~~~-~~~elvLiDi~~-a~g~alDL~~----~~----------------~~~~i~~~~~ 58 (310)
T cd01337 1 VKVAVLGAAGGIGQPLSLLLKLNP-LVSELALYDIVN-TPGVAADLSH----IN----------------TPAKVTGYLG 58 (310)
T ss_pred CEEEEECCCCHHHHHHHHHHHhCC-CCcEEEEEecCc-cceeehHhHh----CC----------------CcceEEEecC
Confidence 479999999999999999887654 345777777652 1111111110 00 0011111101
Q ss_pred cCCCCCCCCChhhhHHHHhcCccEEEEcCccCC-ccccHHHHHHHhHHHHHHHHHHHHhccCCceEE
Q 010075 93 DISSEDLGLKDSNLKEELWNELDIMVNSAAITK-FDERYDVAFGINTLGVIHLVNFAKKCVKLKVFV 158 (519)
Q Consensus 93 Dl~~~~lgls~~~~~~~l~~~vdiViH~Aa~v~-f~~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V 158 (519)
+.+.. ..+.+.|+||-+||..+ ..+.-.+.++.|..-.+.+.+..++. +.+.++
T Consensus 59 ----------~~~~y-~~~~daDivvitaG~~~k~g~tR~dll~~N~~i~~~i~~~i~~~-~p~a~v 113 (310)
T cd01337 59 ----------PEELK-KALKGADVVVIPAGVPRKPGMTRDDLFNINAGIVRDLATAVAKA-CPKALI 113 (310)
T ss_pred ----------CCchH-HhcCCCCEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHh-CCCeEE
Confidence 11111 45678999999999864 34667788999999999999888876 444443
|
MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are localized to the glycosome and mitochondria. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others. |
| >PRK08762 molybdopterin biosynthesis protein MoeB; Validated | Back alignment and domain information |
|---|
Probab=94.49 E-value=0.77 Score=47.94 Aligned_cols=127 Identities=17% Similarity=0.094 Sum_probs=72.4
Q ss_pred hhhcCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHH----HHHhh---hhhHHHHHhhhcccc
Q 010075 7 VEFLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQ----NEVLA---KDVFNVLKEKWGTRL 79 (519)
Q Consensus 7 ~~~~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~----~~~~~---~~~f~~l~~~~~~~~ 79 (519)
++-+++++|+|.|+ |.+|+.+++.|.+.| |.++.++.+..-..+-..|-. +++-. ..+-+++++..|
T Consensus 130 q~~l~~~~VlvvG~-GG~Gs~ia~~La~~G--vg~i~lvD~d~v~~sNl~Rq~l~~~~diG~~Ka~~~~~~l~~~np--- 203 (376)
T PRK08762 130 QRRLLEARVLLIGA-GGLGSPAALYLAAAG--VGTLGIVDHDVVDRSNLQRQILHTEDRVGQPKVDSAAQRLAALNP--- 203 (376)
T ss_pred HHHHhcCcEEEECC-CHHHHHHHHHHHHcC--CCeEEEEeCCEecchhhccccccchhhCCCcHHHHHHHHHHHHCC---
Confidence 34567899999985 779999999999987 578888877632221111100 00000 001123333333
Q ss_pred ccccCCceEEEeccCCCCCCCCChhhhHHHHhcCccEEEEcCccCCccccHHHHHHHhHHHHHHHHHHHHhccCCceEEE
Q 010075 80 NSFISEKITFVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKFDERYDVAFGINTLGVIHLVNFAKKCVKLKVFVH 159 (519)
Q Consensus 80 ~~~~~~~v~~v~gDl~~~~lgls~~~~~~~l~~~vdiViH~Aa~v~f~~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V~ 159 (519)
.-+++.+...++ .... ..+++++|+||.+.... .. -..+-++|.+. + ..+|+
T Consensus 204 ----~v~v~~~~~~~~-------~~~~-~~~~~~~D~Vv~~~d~~------~~--------r~~ln~~~~~~-~-ip~i~ 255 (376)
T PRK08762 204 ----DVQVEAVQERVT-------SDNV-EALLQDVDVVVDGADNF------PT--------RYLLNDACVKL-G-KPLVY 255 (376)
T ss_pred ----CCEEEEEeccCC-------hHHH-HHHHhCCCEEEECCCCH------HH--------HHHHHHHHHHc-C-CCEEE
Confidence 134555555555 3332 36678899999997541 11 11244667764 3 56888
Q ss_pred Eecceeec
Q 010075 160 VSTAYVAG 167 (519)
Q Consensus 160 vSTa~v~~ 167 (519)
.++...+|
T Consensus 256 ~~~~g~~g 263 (376)
T PRK08762 256 GAVFRFEG 263 (376)
T ss_pred EEeccCEE
Confidence 87665444
|
|
| >PRK02472 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional | Back alignment and domain information |
|---|
Probab=94.45 E-value=0.25 Score=52.74 Aligned_cols=36 Identities=14% Similarity=0.169 Sum_probs=30.1
Q ss_pred cCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecC
Q 010075 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAA 49 (519)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~ 49 (519)
+.||+|+|||++| +|...++.|++.| .+|++..+..
T Consensus 3 ~~~k~v~v~G~g~-~G~s~a~~l~~~G---~~V~~~d~~~ 38 (447)
T PRK02472 3 YQNKKVLVLGLAK-SGYAAAKLLHKLG---ANVTVNDGKP 38 (447)
T ss_pred cCCCEEEEEeeCH-HHHHHHHHHHHCC---CEEEEEcCCC
Confidence 4689999999988 9999999999998 5677766543
|
|
| >PRK08328 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=94.44 E-value=0.75 Score=44.58 Aligned_cols=128 Identities=19% Similarity=0.171 Sum_probs=75.3
Q ss_pred hhhcCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHH----HHHHhhhh----hHHHHHhhhccc
Q 010075 7 VEFLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRF----QNEVLAKD----VFNVLKEKWGTR 78 (519)
Q Consensus 7 ~~~~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl----~~~~~~~~----~f~~l~~~~~~~ 78 (519)
++-+++++|+|.| .|.+|+.+++.|.+.| |++++++....-..+-..|- .+++-..+ .-+++++-.|
T Consensus 22 q~~L~~~~VlIiG-~GGlGs~ia~~La~~G--vg~i~lvD~D~ve~sNL~Rq~l~~~~dvG~~~k~~~a~~~l~~~np-- 96 (231)
T PRK08328 22 QEKLKKAKVAVVG-VGGLGSPVAYYLAAAG--VGRILLIDEQTPELSNLNRQILHWEEDLGKNPKPLSAKWKLERFNS-- 96 (231)
T ss_pred HHHHhCCcEEEEC-CCHHHHHHHHHHHHcC--CCEEEEEcCCccChhhhccccccChhhcCchHHHHHHHHHHHHhCC--
Confidence 4556789999998 5779999999999976 58888886654332222220 00110000 0122333333
Q ss_pred cccccCCceEEEeccCCCCCCCCChhhhHHHHhcCccEEEEcCccCCccccHHHHHHHhHHHHHHHHHHHHhccCCceEE
Q 010075 79 LNSFISEKITFVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKFDERYDVAFGINTLGVIHLVNFAKKCVKLKVFV 158 (519)
Q Consensus 79 ~~~~~~~~v~~v~gDl~~~~lgls~~~~~~~l~~~vdiViH~Aa~v~f~~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V 158 (519)
.-+++.+.+.++ +++. ..++++.|+||.|.... +. -..+-++|++. + ..+|
T Consensus 97 -----~v~v~~~~~~~~-------~~~~-~~~l~~~D~Vid~~d~~------~~--------r~~l~~~~~~~-~-ip~i 147 (231)
T PRK08328 97 -----DIKIETFVGRLS-------EENI-DEVLKGVDVIVDCLDNF------ET--------RYLLDDYAHKK-G-IPLV 147 (231)
T ss_pred -----CCEEEEEeccCC-------HHHH-HHHHhcCCEEEECCCCH------HH--------HHHHHHHHHHc-C-CCEE
Confidence 235666666665 3343 46778999999986431 11 11233566664 4 5688
Q ss_pred EEecceeecC
Q 010075 159 HVSTAYVAGE 168 (519)
Q Consensus 159 ~vSTa~v~~~ 168 (519)
+.++...+|.
T Consensus 148 ~g~~~g~~G~ 157 (231)
T PRK08328 148 HGAVEGTYGQ 157 (231)
T ss_pred EEeeccCEEE
Confidence 8888777764
|
|
| >cd01492 Aos1_SUMO Ubiquitin activating enzyme (E1) subunit Aos1 | Back alignment and domain information |
|---|
Probab=94.29 E-value=0.59 Score=44.14 Aligned_cols=127 Identities=14% Similarity=0.190 Sum_probs=74.0
Q ss_pred hhhcCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHH----HHHHhh---hhhHHHHHhhhcccc
Q 010075 7 VEFLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRF----QNEVLA---KDVFNVLKEKWGTRL 79 (519)
Q Consensus 7 ~~~~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl----~~~~~~---~~~f~~l~~~~~~~~ 79 (519)
++-+++++|+|.|+.| +|..+++.|.+.| |++|.++....-..+-..|- .+.+-+ ...-+++++..|.
T Consensus 16 Q~~L~~s~VlIiG~gg-lG~evak~La~~G--Vg~i~lvD~d~ve~snL~rqfl~~~~diG~~Ka~a~~~~L~~lNp~-- 90 (197)
T cd01492 16 QKRLRSARILLIGLKG-LGAEIAKNLVLSG--IGSLTILDDRTVTEEDLGAQFLIPAEDLGQNRAEASLERLRALNPR-- 90 (197)
T ss_pred HHHHHhCcEEEEcCCH-HHHHHHHHHHHcC--CCEEEEEECCcccHhhCCCCccccHHHcCchHHHHHHHHHHHHCCC--
Confidence 4557789999999766 9999999999977 57888876543221111110 000100 1123445555442
Q ss_pred ccccCCceEEEeccCCCCCCCCChhhhHHHHhcCccEEEEcCccCCccccHHHHHHHhHHHHHHHHHHHHhccCCceEEE
Q 010075 80 NSFISEKITFVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKFDERYDVAFGINTLGVIHLVNFAKKCVKLKVFVH 159 (519)
Q Consensus 80 ~~~~~~~v~~v~gDl~~~~lgls~~~~~~~l~~~vdiViH~Aa~v~f~~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V~ 159 (519)
-+++++...+.+ . .....+++|+||.+... .+... .+-++|++. ++ .|++
T Consensus 91 -----v~i~~~~~~~~~-------~--~~~~~~~~dvVi~~~~~------~~~~~--------~ln~~c~~~-~i-p~i~ 140 (197)
T cd01492 91 -----VKVSVDTDDISE-------K--PEEFFSQFDVVVATELS------RAELV--------KINELCRKL-GV-KFYA 140 (197)
T ss_pred -----CEEEEEecCccc-------c--HHHHHhCCCEEEECCCC------HHHHH--------HHHHHHHHc-CC-CEEE
Confidence 356666655542 1 12456789999977432 22222 234677774 43 6888
Q ss_pred EecceeecC
Q 010075 160 VSTAYVAGE 168 (519)
Q Consensus 160 vSTa~v~~~ 168 (519)
.++...+|.
T Consensus 141 ~~~~G~~G~ 149 (197)
T cd01492 141 TGVHGLFGF 149 (197)
T ss_pred EEecCCEEE
Confidence 888776663
|
Aos1 is part of the heterodimeric activating enzyme (E1), specific for the SUMO family of ubiquitin-like proteins (Ubls). E1 enzymes are part of a conjugation cascade to attach Ub or Ubls, covalently to substrate proteins consisting of activating (E1), conjugating (E2), and/or ligating (E3) enzymes. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and Ubls C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Post-translational modification by SUMO family of ubiquitin-like proteins (Ublps) is involved in cell division, nuclear transport, the stress response and signal transduction. Aos1 contains part of the adenylation domain. |
| >PRK05671 aspartate-semialdehyde dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=94.13 E-value=0.1 Score=53.55 Aligned_cols=35 Identities=26% Similarity=0.300 Sum_probs=28.5
Q ss_pred CEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEe
Q 010075 13 KTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVR 47 (519)
Q Consensus 13 k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR 47 (519)
++|.|+||||++|..|++.|.++++.+.++..+..
T Consensus 5 ~~IaIvGATG~vG~eLlrlL~~~~hP~~~l~~v~s 39 (336)
T PRK05671 5 LDIAVVGATGTVGEALVQILEERDFPVGTLHLLAS 39 (336)
T ss_pred CEEEEEccCCHHHHHHHHHHhhCCCCceEEEEEEC
Confidence 68999999999999999999976555556666643
|
|
| >PRK07878 molybdopterin biosynthesis-like protein MoeZ; Validated | Back alignment and domain information |
|---|
Probab=94.06 E-value=0.55 Score=49.32 Aligned_cols=128 Identities=18% Similarity=0.141 Sum_probs=75.7
Q ss_pred hhhcCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHH--H--HHHHhhhh---hHHHHHhhhcccc
Q 010075 7 VEFLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALR--F--QNEVLAKD---VFNVLKEKWGTRL 79 (519)
Q Consensus 7 ~~~~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~r--l--~~~~~~~~---~f~~l~~~~~~~~ 79 (519)
++-+++.+|+|.| .|.+|..+++.|.+.| |++|.++....-..+-..| + .+++-++. .-+++++..|
T Consensus 37 q~~L~~~~VlviG-~GGlGs~va~~La~~G--vg~i~lvD~D~ve~sNL~Rq~l~~~~diG~~Ka~~a~~~l~~~np--- 110 (392)
T PRK07878 37 QKRLKNARVLVIG-AGGLGSPTLLYLAAAG--VGTLGIVEFDVVDESNLQRQVIHGQSDVGRSKAQSARDSIVEINP--- 110 (392)
T ss_pred HHHHhcCCEEEEC-CCHHHHHHHHHHHHcC--CCeEEEECCCEecCcccccccccChhcCCChHHHHHHHHHHHhCC---
Confidence 3446788999998 5779999999999977 5788877654422222222 0 00111100 1233444443
Q ss_pred ccccCCceEEEeccCCCCCCCCChhhhHHHHhcCccEEEEcCccCCccccHHHHHHHhHHHHHHHHHHHHhccCCceEEE
Q 010075 80 NSFISEKITFVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKFDERYDVAFGINTLGVIHLVNFAKKCVKLKVFVH 159 (519)
Q Consensus 80 ~~~~~~~v~~v~gDl~~~~lgls~~~~~~~l~~~vdiViH~Aa~v~f~~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V~ 159 (519)
.-+++.+...++ .... ..+++++|+||.|... .. .-..+-++|.+. + +.||+
T Consensus 111 ----~v~i~~~~~~i~-------~~~~-~~~~~~~D~Vvd~~d~------~~--------~r~~ln~~~~~~-~-~p~v~ 162 (392)
T PRK07878 111 ----LVNVRLHEFRLD-------PSNA-VELFSQYDLILDGTDN------FA--------TRYLVNDAAVLA-G-KPYVW 162 (392)
T ss_pred ----CcEEEEEeccCC-------hhHH-HHHHhcCCEEEECCCC------HH--------HHHHHHHHHHHc-C-CCEEE
Confidence 245666777776 3333 3677899999988633 11 112244567764 3 56898
Q ss_pred EecceeecC
Q 010075 160 VSTAYVAGE 168 (519)
Q Consensus 160 vSTa~v~~~ 168 (519)
.|+...+|.
T Consensus 163 ~~~~g~~G~ 171 (392)
T PRK07878 163 GSIYRFEGQ 171 (392)
T ss_pred EEeccCEEE
Confidence 888777764
|
|
| >PLN02819 lysine-ketoglutarate reductase/saccharopine dehydrogenase | Back alignment and domain information |
|---|
Probab=94.01 E-value=0.33 Score=56.71 Aligned_cols=79 Identities=16% Similarity=0.181 Sum_probs=51.3
Q ss_pred CCCEEEEeCCccHHHHHHHHHHHHhCCCcc------------EEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccc
Q 010075 11 ENKTILVSGVTGFVAKVFIEKILRVQPNVK------------KLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTR 78 (519)
Q Consensus 11 ~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~------------~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~ 78 (519)
+.|+|+|.|| |++|+..++.|.+. +++. .|.+..+... ..+++.+ .
T Consensus 568 ~~~rIlVLGA-G~VG~~~a~~La~~-~~~~~~~~~~~~~~~~lV~VaD~~~~---~a~~la~-------------~---- 625 (1042)
T PLN02819 568 KSQNVLILGA-GRVCRPAAEYLASV-KTISYYGDDSEEPTDVHVIVASLYLK---DAKETVE-------------G---- 625 (1042)
T ss_pred cCCcEEEECC-CHHHHHHHHHHHhC-cCccccccccccccccEEEEECCCHH---HHHHHHH-------------h----
Confidence 3679999996 99999999999875 4432 2444443321 1222221 1
Q ss_pred cccccCCceEEEeccCCCCCCCCChhhhHHHHhcCccEEEEcCcc
Q 010075 79 LNSFISEKITFVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAI 123 (519)
Q Consensus 79 ~~~~~~~~v~~v~gDl~~~~lgls~~~~~~~l~~~vdiViH~Aa~ 123 (519)
..++..+..|+++ .+.+..+++++|+||.|...
T Consensus 626 -----~~~~~~v~lDv~D-------~e~L~~~v~~~DaVIsalP~ 658 (1042)
T PLN02819 626 -----IENAEAVQLDVSD-------SESLLKYVSQVDVVISLLPA 658 (1042)
T ss_pred -----cCCCceEEeecCC-------HHHHHHhhcCCCEEEECCCc
Confidence 1356788999884 33334666789999999876
|
|
| >PRK08644 thiamine biosynthesis protein ThiF; Provisional | Back alignment and domain information |
|---|
Probab=93.96 E-value=0.85 Score=43.57 Aligned_cols=129 Identities=21% Similarity=0.111 Sum_probs=72.7
Q ss_pred hhhhcCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHH---HHHHhhh---hhHHHHHhhhcccc
Q 010075 6 VVEFLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRF---QNEVLAK---DVFNVLKEKWGTRL 79 (519)
Q Consensus 6 i~~~~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl---~~~~~~~---~~f~~l~~~~~~~~ 79 (519)
.++-+++.+|+|.|+ |.+|..+++.|.+.| |.++.+.....-..+-..|- .+++-.+ ..-+++++-.|
T Consensus 22 ~q~~L~~~~V~ViG~-GglGs~ia~~La~~G--vg~i~lvD~D~ve~sNL~Rq~~~~~dvG~~Ka~~a~~~l~~lnp--- 95 (212)
T PRK08644 22 LLEKLKKAKVGIAGA-GGLGSNIAVALARSG--VGNLKLVDFDVVEPSNLNRQQYFISQIGMPKVEALKENLLEINP--- 95 (212)
T ss_pred HHHHHhCCCEEEECc-CHHHHHHHHHHHHcC--CCeEEEEeCCEeccccccccEeehhhCCChHHHHHHHHHHHHCC---
Confidence 355678899999995 789999999999976 57888877763222111110 0011000 01122333222
Q ss_pred ccccCCceEEEeccCCCCCCCCChhhhHHHHhcCccEEEEcCccCCccccHHHHHHHhHHHHHHHHHHHHhccCCceEEE
Q 010075 80 NSFISEKITFVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKFDERYDVAFGINTLGVIHLVNFAKKCVKLKVFVH 159 (519)
Q Consensus 80 ~~~~~~~v~~v~gDl~~~~lgls~~~~~~~l~~~vdiViH~Aa~v~f~~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V~ 159 (519)
.-+++.+...++ +.+. ..+++++|+||.|.-. . .....+.+.|.+.. -..+|+
T Consensus 96 ----~v~v~~~~~~i~-------~~~~-~~~~~~~DvVI~a~D~------~--------~~r~~l~~~~~~~~-~~p~I~ 148 (212)
T PRK08644 96 ----FVEIEAHNEKID-------EDNI-EELFKDCDIVVEAFDN------A--------ETKAMLVETVLEHP-GKKLVA 148 (212)
T ss_pred ----CCEEEEEeeecC-------HHHH-HHHHcCCCEEEECCCC------H--------HHHHHHHHHHHHhC-CCCEEE
Confidence 245666666666 3333 3667899999988421 1 12233555666531 256777
Q ss_pred Eecceeec
Q 010075 160 VSTAYVAG 167 (519)
Q Consensus 160 vSTa~v~~ 167 (519)
.|...-++
T Consensus 149 ~~~~~~~~ 156 (212)
T PRK08644 149 ASGMAGYG 156 (212)
T ss_pred eehhhccC
Confidence 76544444
|
|
| >PRK08223 hypothetical protein; Validated | Back alignment and domain information |
|---|
Probab=93.95 E-value=0.75 Score=45.91 Aligned_cols=129 Identities=11% Similarity=0.074 Sum_probs=75.0
Q ss_pred hhhcCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHH----HHHHhhh---hhHHHHHhhhcccc
Q 010075 7 VEFLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRF----QNEVLAK---DVFNVLKEKWGTRL 79 (519)
Q Consensus 7 ~~~~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl----~~~~~~~---~~f~~l~~~~~~~~ 79 (519)
++-+++.+|+|.|+ |.+|..+++.|.+.| |.++.++....-..+-..|- .+++-.. ..-+++++-.|
T Consensus 22 Q~kL~~s~VlIvG~-GGLGs~va~~LA~aG--VG~i~lvD~D~Ve~SNLnRQ~l~~~~diG~~Kve~a~~~l~~iNP--- 95 (287)
T PRK08223 22 QQRLRNSRVAIAGL-GGVGGIHLLTLARLG--IGKFTIADFDVFELRNFNRQAGAMMSTLGRPKAEVLAEMVRDINP--- 95 (287)
T ss_pred HHHHhcCCEEEECC-CHHHHHHHHHHHHhC--CCeEEEEeCCCcchhccccccCcChhHCCCcHHHHHHHHHHHHCC---
Confidence 45578899999984 679999999999987 57888876654332222220 0011100 01234444444
Q ss_pred ccccCCceEEEeccCCCCCCCCChhhhHHHHhcCccEEEEcCccCCccccHHHHHHHhHHHHHHHHHHHHhccCCceEEE
Q 010075 80 NSFISEKITFVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKFDERYDVAFGINTLGVIHLVNFAKKCVKLKVFVH 159 (519)
Q Consensus 80 ~~~~~~~v~~v~gDl~~~~lgls~~~~~~~l~~~vdiViH~Aa~v~f~~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V~ 159 (519)
.-+|+.+...++ +++. .++++++|+|+.+.-... +..-..+-+.|.+. + +.+|+
T Consensus 96 ----~v~V~~~~~~l~-------~~n~-~~ll~~~DlVvD~~D~~~------------~~~r~~ln~~c~~~-~-iP~V~ 149 (287)
T PRK08223 96 ----ELEIRAFPEGIG-------KENA-DAFLDGVDVYVDGLDFFE------------FDARRLVFAACQQR-G-IPALT 149 (287)
T ss_pred ----CCEEEEEecccC-------ccCH-HHHHhCCCEEEECCCCCc------------HHHHHHHHHHHHHc-C-CCEEE
Confidence 246777777777 3333 367789999996642211 11122345567764 4 46777
Q ss_pred Eecceeec
Q 010075 160 VSTAYVAG 167 (519)
Q Consensus 160 vSTa~v~~ 167 (519)
.|.....|
T Consensus 150 ~~~~g~~g 157 (287)
T PRK08223 150 AAPLGMGT 157 (287)
T ss_pred EeccCCeE
Confidence 76544333
|
|
| >PLN00112 malate dehydrogenase (NADP); Provisional | Back alignment and domain information |
|---|
Probab=93.41 E-value=1.9 Score=45.76 Aligned_cols=119 Identities=13% Similarity=0.083 Sum_probs=73.4
Q ss_pred CCEEEEeCCccHHHHHHHHHHHHh---C---CCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCC
Q 010075 12 NKTILVSGVTGFVAKVFIEKILRV---Q---PNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISE 85 (519)
Q Consensus 12 ~k~VlITGaTGFlG~~Lv~~LL~~---g---~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~ 85 (519)
--+|.|+||+|.+|.+++-.|+.. + +-+.+++++.+.+.....+. + ++.+.. | .+ ..
T Consensus 100 ~~KV~IIGAaG~VG~~~A~~L~~~~v~g~~~~i~~eLvliD~~~~~a~G~a-m--DL~daa-~------------~~-~~ 162 (444)
T PLN00112 100 LINVAVSGAAGMISNHLLFKLASGEVFGPDQPIALKLLGSERSKQALEGVA-M--ELEDSL-Y------------PL-LR 162 (444)
T ss_pred CeEEEEECCCcHHHHHHHHHHHhcccccCCCCcccEEEEEcCCcchhHHHH-H--HHHHhh-h------------hh-cC
Confidence 358999999999999999999875 1 22346777777654432221 1 121110 0 00 11
Q ss_pred ceEEEeccCCCCCCCCChhhhHHHHhcCccEEEEcCccCC-ccccHHHHHHHhHHHHHHHHHHHHh-ccCCceEEEEe
Q 010075 86 KITFVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITK-FDERYDVAFGINTLGVIHLVNFAKK-CVKLKVFVHVS 161 (519)
Q Consensus 86 ~v~~v~gDl~~~~lgls~~~~~~~l~~~vdiViH~Aa~v~-f~~~~~~~~~~Nv~gt~~ll~~a~~-~~~l~~~V~vS 161 (519)
++.+..+| + ..+.+.|+||-.||..+ ..++-.+.++.|+.-.+.+.+...+ ...-..+|.+|
T Consensus 163 ~v~i~~~~------------y--e~~kdaDiVVitAG~prkpG~tR~dLl~~N~~I~k~i~~~I~~~a~p~~ivIVVs 226 (444)
T PLN00112 163 EVSIGIDP------------Y--EVFQDAEWALLIGAKPRGPGMERADLLDINGQIFAEQGKALNEVASRNVKVIVVG 226 (444)
T ss_pred ceEEecCC------------H--HHhCcCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEcC
Confidence 22222222 1 34578999999999854 3456777899999999999998888 32223344444
|
|
| >PTZ00374 dihydroxyacetone phosphate acyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=93.39 E-value=0.5 Score=54.08 Aligned_cols=58 Identities=14% Similarity=0.211 Sum_probs=39.2
Q ss_pred EEechhHHHHHHHhcCCCCCCc-cccCCCCCCCHHHHHhhcch----hhHHHHHhCCCC-cchhh
Q 010075 384 IFDDTNTEKLRMTARGSRTETD-LFYFDPDSIEWSDYFMNTHI----PGVEKLLQQKRS-FPKTK 442 (519)
Q Consensus 384 ~F~~~n~~~L~~~l~~~Dr~~~-~F~fD~~~idW~~Y~~~~~~----~Girkyllke~~-~~~ar 442 (519)
.|+..=-..|+..+...--=+- .-.+|..+|||+.|+..+ + .|+.||++||+. +|..+
T Consensus 427 ~~~~~~y~~ll~~~~~~~~~~~~~~~~~~~~i~W~~y~~~~-~~~~l~~l~~~v~~~~~~~p~p~ 490 (1108)
T PTZ00374 427 SFNVALYHSLLRRVTSDATLRPLHPYIALVEVDWDAYVKVI-AQAVLEHLARQIFRSPFAFPPPR 490 (1108)
T ss_pred cccHHHHHHHHHHHhhcccccchHhhhHHHhcCHHHHHHHH-HHHHHHHHHHHHhcCCCCCCCCc
Confidence 4555555566665543220000 126799999999999997 6 899999999965 66654
|
|
| >PRK07877 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=93.36 E-value=0.58 Score=52.76 Aligned_cols=97 Identities=15% Similarity=0.107 Sum_probs=63.0
Q ss_pred hhhcCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHH---HHHhhhhhH----HHHHhhhcccc
Q 010075 7 VEFLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQ---NEVLAKDVF----NVLKEKWGTRL 79 (519)
Q Consensus 7 ~~~~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~---~~~~~~~~f----~~l~~~~~~~~ 79 (519)
++-+++++|+|.|+ | +|+.+++.|.+.|- |.++++.....-..+-..|.. ..+ ..+.- +++++-.|
T Consensus 102 Q~~L~~~~V~IvG~-G-lGs~~a~~LaraGv-vG~l~lvD~D~ve~sNLnRq~~~~~di-G~~Kv~~a~~~l~~inp--- 174 (722)
T PRK07877 102 QERLGRLRIGVVGL-S-VGHAIAHTLAAEGL-CGELRLADFDTLELSNLNRVPAGVFDL-GVNKAVVAARRIAELDP--- 174 (722)
T ss_pred HHHHhcCCEEEEEe-c-HHHHHHHHHHHccC-CCeEEEEcCCEEcccccccccCChhhc-ccHHHHHHHHHHHHHCC---
Confidence 55678899999999 8 99999999999861 268888776554444444420 011 11111 22333333
Q ss_pred ccccCCceEEEeccCCCCCCCCChhhhHHHHhcCccEEEEcCc
Q 010075 80 NSFISEKITFVPGDISSEDLGLKDSNLKEELWNELDIMVNSAA 122 (519)
Q Consensus 80 ~~~~~~~v~~v~gDl~~~~lgls~~~~~~~l~~~vdiViH~Aa 122 (519)
.-+|+.+...++ .+.. ..+++++|+||.|.-
T Consensus 175 ----~i~v~~~~~~i~-------~~n~-~~~l~~~DlVvD~~D 205 (722)
T PRK07877 175 ----YLPVEVFTDGLT-------EDNV-DAFLDGLDVVVEECD 205 (722)
T ss_pred ----CCEEEEEeccCC-------HHHH-HHHhcCCCEEEECCC
Confidence 246778888877 4443 477889999999963
|
|
| >PRK08040 putative semialdehyde dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=93.31 E-value=0.2 Score=51.29 Aligned_cols=38 Identities=29% Similarity=0.374 Sum_probs=30.2
Q ss_pred CCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEec
Q 010075 11 ENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRA 48 (519)
Q Consensus 11 ~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~ 48 (519)
++.+|.|.||||++|..|++.|.++.+.+.++..+...
T Consensus 3 ~~~~vaIvGATG~vG~ellrlL~~~~hP~~~l~~laS~ 40 (336)
T PRK08040 3 EGWNIALLGATGAVGEALLELLAERQFPVGELYALASE 40 (336)
T ss_pred CCCEEEEEccCCHHHHHHHHHHhcCCCCceEEEEEEcc
Confidence 46789999999999999999888764445677777543
|
|
| >PRK05600 thiamine biosynthesis protein ThiF; Validated | Back alignment and domain information |
|---|
Probab=93.25 E-value=1 Score=46.83 Aligned_cols=128 Identities=19% Similarity=0.165 Sum_probs=75.2
Q ss_pred hhhcCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHH----HHHHhhh---hhHHHHHhhhcccc
Q 010075 7 VEFLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRF----QNEVLAK---DVFNVLKEKWGTRL 79 (519)
Q Consensus 7 ~~~~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl----~~~~~~~---~~f~~l~~~~~~~~ 79 (519)
++-+++.+|+|.| .|.+|..++..|.+.| |++|+++....-..+-..|- .+++-.+ ..-+++++..|
T Consensus 36 q~~l~~~~VliiG-~GglG~~v~~~La~~G--vg~i~ivD~D~ve~sNL~RQ~l~~~~diG~~Ka~~~~~~l~~~np--- 109 (370)
T PRK05600 36 QERLHNARVLVIG-AGGLGCPAMQSLASAG--VGTITLIDDDTVDVSNIHRQILFGASDVGRPKVEVAAERLKEIQP--- 109 (370)
T ss_pred HHHhcCCcEEEEC-CCHHHHHHHHHHHHcC--CCEEEEEeCCEEccccccccccCChhHCCCHHHHHHHHHHHHHCC---
Confidence 4456788999998 5779999999999976 57888877654322222220 0011000 11233333333
Q ss_pred ccccCCceEEEeccCCCCCCCCChhhhHHHHhcCccEEEEcCccCCccccHHHHHHHhHHHHHHHHHHHHhccCCceEEE
Q 010075 80 NSFISEKITFVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKFDERYDVAFGINTLGVIHLVNFAKKCVKLKVFVH 159 (519)
Q Consensus 80 ~~~~~~~v~~v~gDl~~~~lgls~~~~~~~l~~~vdiViH~Aa~v~f~~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V~ 159 (519)
.-+++.+...++ .... ..+++++|+||.|... ++. -..+-++|.+. + ..+|+
T Consensus 110 ----~v~i~~~~~~i~-------~~~~-~~~~~~~DlVid~~Dn------~~~--------r~~in~~~~~~-~-iP~v~ 161 (370)
T PRK05600 110 ----DIRVNALRERLT-------AENA-VELLNGVDLVLDGSDS------FAT--------KFLVADAAEIT-G-TPLVW 161 (370)
T ss_pred ----CCeeEEeeeecC-------HHHH-HHHHhCCCEEEECCCC------HHH--------HHHHHHHHHHc-C-CCEEE
Confidence 235667776666 3333 3677899999998653 111 12234566664 3 46888
Q ss_pred EecceeecC
Q 010075 160 VSTAYVAGE 168 (519)
Q Consensus 160 vSTa~v~~~ 168 (519)
.+....+|.
T Consensus 162 ~~~~g~~G~ 170 (370)
T PRK05600 162 GTVLRFHGE 170 (370)
T ss_pred EEEecCEEE
Confidence 877655553
|
|
| >PRK13982 bifunctional SbtC-like/phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Provisional | Back alignment and domain information |
|---|
Probab=93.25 E-value=0.22 Score=53.24 Aligned_cols=35 Identities=11% Similarity=0.165 Sum_probs=29.6
Q ss_pred cCCCEEEEeCC----------------ccHHHHHHHHHHHHhCCCccEEEEEEe
Q 010075 10 LENKTILVSGV----------------TGFVAKVFIEKILRVQPNVKKLYLFVR 47 (519)
Q Consensus 10 ~~~k~VlITGa----------------TGFlG~~Lv~~LL~~g~~v~~V~~LvR 47 (519)
++||+||||+| ||-+|.+|++.+...|. +|+++.-
T Consensus 254 l~gkkvLITaGpT~E~IDpVR~ItN~SSGkmG~alA~aa~~~GA---~VtlI~G 304 (475)
T PRK13982 254 LAGRRVLITAGPTHEPIDPVRYIANRSSGKQGFAIAAAAAAAGA---EVTLISG 304 (475)
T ss_pred cCCCEEEEecCCccccCCcceeeCCCCchHHHHHHHHHHHHCCC---cEEEEeC
Confidence 78999999986 78899999999999995 5565553
|
|
| >PRK07411 hypothetical protein; Validated | Back alignment and domain information |
|---|
Probab=93.24 E-value=0.82 Score=47.97 Aligned_cols=128 Identities=13% Similarity=0.084 Sum_probs=77.4
Q ss_pred hhhcCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHH--H--HHHHhhh---hhHHHHHhhhcccc
Q 010075 7 VEFLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALR--F--QNEVLAK---DVFNVLKEKWGTRL 79 (519)
Q Consensus 7 ~~~~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~r--l--~~~~~~~---~~f~~l~~~~~~~~ 79 (519)
++-++..+|+|.|+ |.+|..+++.|.+.| |+++.++....-..+-..| + .+.+-.. ..-+++++..|
T Consensus 33 q~~L~~~~VlivG~-GGlG~~va~~La~~G--vg~l~lvD~D~ve~sNL~RQ~l~~~~dvG~~Ka~~a~~~l~~~np--- 106 (390)
T PRK07411 33 QKRLKAASVLCIGT-GGLGSPLLLYLAAAG--IGRIGIVDFDVVDSSNLQRQVIHGTSWVGKPKIESAKNRILEINP--- 106 (390)
T ss_pred HHHHhcCcEEEECC-CHHHHHHHHHHHHcC--CCEEEEECCCEecccccCcCcccChHHCCCcHHHHHHHHHHHHCC---
Confidence 45577899999985 669999999999976 5788877665433222222 0 0011111 11244455444
Q ss_pred ccccCCceEEEeccCCCCCCCCChhhhHHHHhcCccEEEEcCccCCccccHHHHHHHhHHHHHHHHHHHHhccCCceEEE
Q 010075 80 NSFISEKITFVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKFDERYDVAFGINTLGVIHLVNFAKKCVKLKVFVH 159 (519)
Q Consensus 80 ~~~~~~~v~~v~gDl~~~~lgls~~~~~~~l~~~vdiViH~Aa~v~f~~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V~ 159 (519)
.-+++.+...++ .+.. ..++.++|+||.|... ++.-. .+-++|.+. + +.+|+
T Consensus 107 ----~v~v~~~~~~~~-------~~~~-~~~~~~~D~Vvd~~d~------~~~r~--------~ln~~~~~~-~-~p~v~ 158 (390)
T PRK07411 107 ----YCQVDLYETRLS-------SENA-LDILAPYDVVVDGTDN------FPTRY--------LVNDACVLL-N-KPNVY 158 (390)
T ss_pred ----CCeEEEEecccC-------HHhH-HHHHhCCCEEEECCCC------HHHHH--------HHHHHHHHc-C-CCEEE
Confidence 246788887777 3333 3667899999998653 22111 233566653 3 56888
Q ss_pred EecceeecC
Q 010075 160 VSTAYVAGE 168 (519)
Q Consensus 160 vSTa~v~~~ 168 (519)
.+....+|.
T Consensus 159 ~~~~g~~g~ 167 (390)
T PRK07411 159 GSIFRFEGQ 167 (390)
T ss_pred EEEccCEEE
Confidence 877766654
|
|
| >COG0136 Asd Aspartate-semialdehyde dehydrogenase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=93.21 E-value=0.18 Score=50.96 Aligned_cols=38 Identities=26% Similarity=0.343 Sum_probs=32.1
Q ss_pred CCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecC
Q 010075 12 NKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAA 49 (519)
Q Consensus 12 ~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~ 49 (519)
+++|.|.||||-+|+.+++.|.++.+.+..+.++...+
T Consensus 1 ~~~VavvGATG~VG~~~~~~L~e~~f~~~~~~~~AS~r 38 (334)
T COG0136 1 KLNVAVLGATGAVGQVLLELLEERHFPFEELVLLASAR 38 (334)
T ss_pred CcEEEEEeccchHHHHHHHHHHhcCCCcceEEEEeccc
Confidence 36899999999999999999999888887777776544
|
|
| >cd05291 HicDH_like L-2-hydroxyisocapronate dehydrogenases and some bacterial L-lactate dehydrogenases | Back alignment and domain information |
|---|
Probab=93.18 E-value=1 Score=45.61 Aligned_cols=113 Identities=15% Similarity=0.142 Sum_probs=69.7
Q ss_pred CEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEEec
Q 010075 13 KTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVPG 92 (519)
Q Consensus 13 k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v~g 92 (519)
++|.|.|+ |.+|+.++..|+..+. ..+|+++.|...... .+..++.+... .....+....+
T Consensus 1 ~kI~IIGa-G~vG~~~a~~l~~~g~-~~ei~l~D~~~~~~~---~~a~dL~~~~~--------------~~~~~~~i~~~ 61 (306)
T cd05291 1 RKVVIIGA-GHVGSSFAYSLVNQGI-ADELVLIDINEEKAE---GEALDLEDALA--------------FLPSPVKIKAG 61 (306)
T ss_pred CEEEEECC-CHHHHHHHHHHHhcCC-CCEEEEEeCCcchhh---HhHhhHHHHhh--------------ccCCCeEEEcC
Confidence 47899995 9999999999998763 247888888654322 11111111000 00111222211
Q ss_pred cCCCCCCCCChhhhHHHHhcCccEEEEcCccCCc-cccHHHHHHHhHHHHHHHHHHHHhccCCceEEE
Q 010075 93 DISSEDLGLKDSNLKEELWNELDIMVNSAAITKF-DERYDVAFGINTLGVIHLVNFAKKCVKLKVFVH 159 (519)
Q Consensus 93 Dl~~~~lgls~~~~~~~l~~~vdiViH~Aa~v~f-~~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V~ 159 (519)
| . ..+.+.|+||.+++..+- .++-...+..|..-.+.+.+..++. +.+.++.
T Consensus 62 ~------------~--~~l~~aDIVIitag~~~~~g~~R~dll~~N~~i~~~~~~~i~~~-~~~~~vi 114 (306)
T cd05291 62 D------------Y--SDCKDADIVVITAGAPQKPGETRLDLLEKNAKIMKSIVPKIKAS-GFDGIFL 114 (306)
T ss_pred C------------H--HHhCCCCEEEEccCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHh-CCCeEEE
Confidence 1 1 224689999999998543 3456677899999999999988886 3344433
|
L-2-hydroxyisocapronate dehydrogenase (HicDH) catalyzes the conversion of a variety of 2-oxo carboxylic acids with medium-sized aliphatic or aromatic side chains. This subfamily is composed of HicDHs and some bacterial L-lactate dehydrogenases (LDH). LDHs catalyze the last step of glycolysis in which pyruvate is converted to L-lactate. Bacterial LDHs can be non-allosteric or may be activated by an allosteric effector such as fructose-1,6-bisphosphate. Members of this subfamily with known structures such as the HicDH of Lactobacillus confusus, the non-allosteric LDH of Lactobacillus pentosus, and the allosteric LDH of Bacillus stearothermophilus, show that they exist as homotetramers. The HicDH-like subfamily is part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine |
| >cd01483 E1_enzyme_family Superfamily of activating enzymes (E1) of the ubiquitin-like proteins | Back alignment and domain information |
|---|
Probab=93.16 E-value=2.3 Score=37.60 Aligned_cols=120 Identities=18% Similarity=0.144 Sum_probs=68.3
Q ss_pred EEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHH---HHHhhhhhH----HHHHhhhccccccccCCc
Q 010075 14 TILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQ---NEVLAKDVF----NVLKEKWGTRLNSFISEK 86 (519)
Q Consensus 14 ~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~---~~~~~~~~f----~~l~~~~~~~~~~~~~~~ 86 (519)
+|+|.|+ |.+|..+++.|.+.|. +++.++....-..+-..|-. .+-...+.- +++++..| .-+
T Consensus 1 ~VliiG~-GglGs~ia~~L~~~Gv--~~i~ivD~d~v~~~nl~r~~~~~~~~vG~~Ka~~~~~~l~~~~p-------~v~ 70 (143)
T cd01483 1 RVLLVGL-GGLGSEIALNLARSGV--GKITLIDFDTVELSNLNRQFLARQADIGKPKAEVAARRLNELNP-------GVN 70 (143)
T ss_pred CEEEECC-CHHHHHHHHHHHHCCC--CEEEEEcCCCcCcchhhccccCChhHCCChHHHHHHHHHHHHCC-------CcE
Confidence 4889996 8899999999999874 67877765432221111100 000011111 22333332 245
Q ss_pred eEEEeccCCCCCCCCChhhhHHHHhcCccEEEEcCccCCccccHHHHHHHhHHHHHHHHHHHHhccCCceEEEEecceee
Q 010075 87 ITFVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKFDERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAYVA 166 (519)
Q Consensus 87 v~~v~gDl~~~~lgls~~~~~~~l~~~vdiViH~Aa~v~f~~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V~vSTa~v~ 166 (519)
++.+..++.. ... .....+.|+||.|... ......+-++|++. + ..++.+++....
T Consensus 71 i~~~~~~~~~-------~~~-~~~~~~~diVi~~~d~--------------~~~~~~l~~~~~~~-~-i~~i~~~~~g~~ 126 (143)
T cd01483 71 VTAVPEGISE-------DNL-DDFLDGVDLVIDAIDN--------------IAVRRALNRACKEL-G-IPVIDAGGLGLG 126 (143)
T ss_pred EEEEeeecCh-------hhH-HHHhcCCCEEEECCCC--------------HHHHHHHHHHHHHc-C-CCEEEEcCCCcE
Confidence 6666666652 222 3666889999998754 12233455777774 3 567777776544
Q ss_pred c
Q 010075 167 G 167 (519)
Q Consensus 167 ~ 167 (519)
|
T Consensus 127 g 127 (143)
T cd01483 127 G 127 (143)
T ss_pred E
Confidence 4
|
This family includes classical ubiquitin-activating enzymes E1, ubiquitin-like (ubl) activating enzymes and other mechanistic homologes, like MoeB, Thif1 and others. The common reaction mechanism catalyzed by MoeB, ThiF and the E1 enzymes begins with a nucleophilic attack of the C-terminal carboxylate of MoaD, ThiS and ubiquitin, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS. |
| >COG0039 Mdh Malate/lactate dehydrogenases [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=93.05 E-value=1.7 Score=43.90 Aligned_cols=117 Identities=17% Similarity=0.122 Sum_probs=72.6
Q ss_pred CEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEEec
Q 010075 13 KTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVPG 92 (519)
Q Consensus 13 k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v~g 92 (519)
++|.|+|| |.+|+.++-.|+..+.. ..++++.+.+...... .+ ++.+...+ .... .-+.+
T Consensus 1 ~KVaviGa-G~VG~s~a~~l~~~~~~-~el~LiDi~~~~~~G~-a~--DL~~~~~~--------------~~~~-~~i~~ 60 (313)
T COG0039 1 MKVAVIGA-GNVGSSLAFLLLLQGLG-SELVLIDINEEKAEGV-AL--DLSHAAAP--------------LGSD-VKITG 60 (313)
T ss_pred CeEEEECC-ChHHHHHHHHHhccccc-ceEEEEEcccccccch-hc--chhhcchh--------------ccCc-eEEec
Confidence 47999999 99999999999765432 3888888874322111 11 11110000 0011 11122
Q ss_pred cCCCCCCCCChhhhHHHHhcCccEEEEcCccCCc-cccHHHHHHHhHHHHHHHHHHHHhccCCceEEEEec
Q 010075 93 DISSEDLGLKDSNLKEELWNELDIMVNSAAITKF-DERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVST 162 (519)
Q Consensus 93 Dl~~~~lgls~~~~~~~l~~~vdiViH~Aa~v~f-~~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V~vST 162 (519)
| .++ ..+++.|+|+=+||..+- ...-.+.+..|..-.+.+.+...+. ..+.++.|-|
T Consensus 61 ~----------~~y--~~~~~aDiVvitAG~prKpGmtR~DLl~~Na~I~~~i~~~i~~~-~~d~ivlVvt 118 (313)
T COG0039 61 D----------GDY--EDLKGADIVVITAGVPRKPGMTRLDLLEKNAKIVKDIAKAIAKY-APDAIVLVVT 118 (313)
T ss_pred C----------CCh--hhhcCCCEEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhh-CCCeEEEEec
Confidence 2 111 345789999999987653 4566778999999999998888775 4455665554
|
|
| >PRK00436 argC N-acetyl-gamma-glutamyl-phosphate reductase; Validated | Back alignment and domain information |
|---|
Probab=93.03 E-value=0.47 Score=48.88 Aligned_cols=34 Identities=15% Similarity=0.367 Sum_probs=27.5
Q ss_pred CEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEec
Q 010075 13 KTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRA 48 (519)
Q Consensus 13 k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~ 48 (519)
++|+|.||||++|+.+++.|++. |++ ++.++.+.
T Consensus 3 ~kVaIiGAtG~vG~~l~~~L~~~-p~~-elv~v~~~ 36 (343)
T PRK00436 3 IKVGIVGASGYTGGELLRLLLNH-PEV-EIVAVTSR 36 (343)
T ss_pred eEEEEECCCCHHHHHHHHHHHcC-CCc-eEEEEECc
Confidence 68999999999999999999864 554 66666653
|
|
| >PRK09496 trkA potassium transporter peripheral membrane component; Reviewed | Back alignment and domain information |
|---|
Probab=92.86 E-value=0.77 Score=48.97 Aligned_cols=73 Identities=18% Similarity=0.269 Sum_probs=49.4
Q ss_pred CEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEEec
Q 010075 13 KTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVPG 92 (519)
Q Consensus 13 k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v~g 92 (519)
|+|+|.|+ |.+|+.+++.|.+.+ .+|+++.|+... .+.+. + ...+.++.|
T Consensus 1 m~viIiG~-G~ig~~~a~~L~~~g---~~v~vid~~~~~---~~~~~-------------~----------~~~~~~~~g 50 (453)
T PRK09496 1 MKIIIVGA-GQVGYTLAENLSGEN---NDVTVIDTDEER---LRRLQ-------------D----------RLDVRTVVG 50 (453)
T ss_pred CEEEEECC-CHHHHHHHHHHHhCC---CcEEEEECCHHH---HHHHH-------------h----------hcCEEEEEe
Confidence 57999997 999999999999887 466777775321 11111 0 135788999
Q ss_pred cCCCCCCCCChhhhHHHH-hcCccEEEEcCc
Q 010075 93 DISSEDLGLKDSNLKEEL-WNELDIMVNSAA 122 (519)
Q Consensus 93 Dl~~~~lgls~~~~~~~l-~~~vdiViH~Aa 122 (519)
|.++ .+..+.+ .+++|.||-+..
T Consensus 51 d~~~-------~~~l~~~~~~~a~~vi~~~~ 74 (453)
T PRK09496 51 NGSS-------PDVLREAGAEDADLLIAVTD 74 (453)
T ss_pred CCCC-------HHHHHHcCCCcCCEEEEecC
Confidence 9984 3333344 568998886643
|
|
| >TIGR01772 MDH_euk_gproteo malate dehydrogenase, NAD-dependent | Back alignment and domain information |
|---|
Probab=92.80 E-value=1.6 Score=44.35 Aligned_cols=110 Identities=19% Similarity=0.192 Sum_probs=67.8
Q ss_pred EEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccC-CceEEEec
Q 010075 14 TILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFIS-EKITFVPG 92 (519)
Q Consensus 14 ~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~-~~v~~v~g 92 (519)
+|.|+||+|.+|..++..|+..+ -+.++.++.+.+..... ..|. +... .++....+
T Consensus 1 KV~IiGaaG~VG~~~a~~l~~~~-~~~elvL~Di~~a~g~a-~DL~---------------------~~~~~~~i~~~~~ 57 (312)
T TIGR01772 1 KVAVLGAAGGIGQPLSLLLKLQP-YVSELSLYDIAGAAGVA-ADLS---------------------HIPTAASVKGFSG 57 (312)
T ss_pred CEEEECCCCHHHHHHHHHHHhCC-CCcEEEEecCCCCcEEE-chhh---------------------cCCcCceEEEecC
Confidence 48899999999999999887753 44677777765511100 0111 0000 01111011
Q ss_pred cCCCCCCCCChhhhHHHHhcCccEEEEcCccCC-ccccHHHHHHHhHHHHHHHHHHHHhccCCceEE
Q 010075 93 DISSEDLGLKDSNLKEELWNELDIMVNSAAITK-FDERYDVAFGINTLGVIHLVNFAKKCVKLKVFV 158 (519)
Q Consensus 93 Dl~~~~lgls~~~~~~~l~~~vdiViH~Aa~v~-f~~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V 158 (519)
| .+. ...+.+.|+||-+||..+ ......+.+..|+.-.+.+.+...+. +.+.++
T Consensus 58 ~----------~~~-~~~~~daDivvitaG~~~~~g~~R~dll~~N~~I~~~i~~~i~~~-~p~~ii 112 (312)
T TIGR01772 58 E----------EGL-ENALKGADVVVIPAGVPRKPGMTRDDLFNVNAGIVKDLVAAVAES-CPKAMI 112 (312)
T ss_pred C----------Cch-HHHcCCCCEEEEeCCCCCCCCccHHHHHHHhHHHHHHHHHHHHHh-CCCeEE
Confidence 1 111 245678999999999854 34566777999999999998887775 334433
|
Although malate dehydrogenases have in some cases been mistaken for lactate dehydrogenases due to the similarity of these two substrates and the apparent ease with which evolution can toggle these activities, critical residues have been identified which can discriminate between the two activities. At the time of the creation of this model no hits above the trusted cutoff contained critical residues typical of lactate dehydrogenases. |
| >TIGR02354 thiF_fam2 thiamine biosynthesis protein ThiF, family 2 | Back alignment and domain information |
|---|
Probab=92.77 E-value=1.9 Score=40.81 Aligned_cols=97 Identities=20% Similarity=0.237 Sum_probs=57.8
Q ss_pred hhhhcCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHH---HHHHhhhh---hHHHHHhhhcccc
Q 010075 6 VVEFLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRF---QNEVLAKD---VFNVLKEKWGTRL 79 (519)
Q Consensus 6 i~~~~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl---~~~~~~~~---~f~~l~~~~~~~~ 79 (519)
.++-++.++|+|.|+ |.+|+.++..|.+.| |.+|++..+..-..+-..|- .+++-+.. .=+++.+-.|
T Consensus 15 ~q~~L~~~~V~IvG~-GglGs~ia~~La~~G--vg~i~lvD~D~ve~sNL~Rq~~~~~~iG~~Ka~~~~~~l~~inp--- 88 (200)
T TIGR02354 15 IVQKLEQATVAICGL-GGLGSNVAINLARAG--IGKLILVDFDVVEPSNLNRQQYKASQVGEPKTEALKENISEINP--- 88 (200)
T ss_pred HHHHHhCCcEEEECc-CHHHHHHHHHHHHcC--CCEEEEECCCEEcccccccccCChhhCCCHHHHHHHHHHHHHCC---
Confidence 456678899999996 779999999999987 46788877762211111110 00111100 0112222222
Q ss_pred ccccCCceEEEeccCCCCCCCCChhhhHHHHhcCccEEEEc
Q 010075 80 NSFISEKITFVPGDISSEDLGLKDSNLKEELWNELDIMVNS 120 (519)
Q Consensus 80 ~~~~~~~v~~v~gDl~~~~lgls~~~~~~~l~~~vdiViH~ 120 (519)
.-+++.+..+++ .+.. ..+++++|+||-+
T Consensus 89 ----~~~i~~~~~~i~-------~~~~-~~~~~~~DlVi~a 117 (200)
T TIGR02354 89 ----YTEIEAYDEKIT-------EENI-DKFFKDADIVCEA 117 (200)
T ss_pred ----CCEEEEeeeeCC-------HhHH-HHHhcCCCEEEEC
Confidence 135666667776 3333 4677899999988
|
Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with one the E. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the divergent clade of putative ThiF proteins such found in Campylobacter. |
| >PF01113 DapB_N: Dihydrodipicolinate reductase, N-terminus; InterPro: IPR000846 Dihydrodipicolinate reductase catalyzes the second step in the biosynthesis of diaminopimelic acid and lysine, the NAD or NADP-dependent reduction of 2,3-dihydrodipicolinate into 2,3,4,5-tetrahydrodipicolinate [, , ] | Back alignment and domain information |
|---|
Probab=92.63 E-value=0.68 Score=40.15 Aligned_cols=36 Identities=19% Similarity=0.299 Sum_probs=27.2
Q ss_pred CEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecC
Q 010075 13 KTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAA 49 (519)
Q Consensus 13 k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~ 49 (519)
++|.|.|++|-+|+.+++.+++. ++..=+-++.|+.
T Consensus 1 mrV~i~G~~GrMG~~i~~~i~~~-~~~~lv~~v~~~~ 36 (124)
T PF01113_consen 1 MRVGIVGASGRMGRAIAEAILES-PGFELVGAVDRKP 36 (124)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHS-TTEEEEEEEETTT
T ss_pred CEEEEECCCCHHHHHHHHHHHhc-CCcEEEEEEecCC
Confidence 47999999999999999999984 4543344445544
|
In Escherichia coli and Mycobacterium tuberculosis, dihydrodipicolinate reductase has equal specificity for NADH and NADPH, however in Thermotoga maritima there it has a greater affinity for NADPH []. In addition, the enzyme is inhibited by high concentrations of its substrate, which consequently acts as a feedback control on the lysine biosynthesis pathway. In T. maritima, the enzyme also lacks N-terminal and C-terminal loops which are present in enzyme of the former two organisms. This entry represents the N-terminal domain of dihydrodipicolinate reductase which binds the dinucleotide NAD(P)H.; GO: 0008839 dihydrodipicolinate reductase activity, 0009089 lysine biosynthetic process via diaminopimelate, 0055114 oxidation-reduction process; PDB: 3QY9_D 1VM6_C 1ARZ_A 1DIH_A 1DRW_A 1DRV_A 1DRU_A 2DAP_A 1DAP_B 3DAP_A .... |
| >cd05293 LDH_1 A subgroup of L-lactate dehydrogenases | Back alignment and domain information |
|---|
Probab=92.47 E-value=2.9 Score=42.42 Aligned_cols=115 Identities=16% Similarity=0.096 Sum_probs=70.9
Q ss_pred CCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEEe
Q 010075 12 NKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVP 91 (519)
Q Consensus 12 ~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v~ 91 (519)
.++|.|+|| |.+|..++-.|+..+ -..+++++.+.+...... .+ ++..... +. ....+..
T Consensus 3 ~~Ki~IiGa-G~VG~~~a~~l~~~~-~~~el~LiD~~~~~~~g~-a~--Dl~~~~~--------------~~-~~~~v~~ 62 (312)
T cd05293 3 RNKVTVVGV-GQVGMACAISILAKG-LADELVLVDVVEDKLKGE-AM--DLQHGSA--------------FL-KNPKIEA 62 (312)
T ss_pred CCEEEEECC-CHHHHHHHHHHHhcC-CCCEEEEEeCCccHHHHH-HH--HHHHhhc--------------cC-CCCEEEE
Confidence 368999996 999999999888764 346788887765322111 11 1211100 00 1112221
Q ss_pred -ccCCCCCCCCChhhhHHHHhcCccEEEEcCccCCc-cccHHHHHHHhHHHHHHHHHHHHhccCCce-EEEEe
Q 010075 92 -GDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF-DERYDVAFGINTLGVIHLVNFAKKCVKLKV-FVHVS 161 (519)
Q Consensus 92 -gDl~~~~lgls~~~~~~~l~~~vdiViH~Aa~v~f-~~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~-~V~vS 161 (519)
+| . +.+.+.|+||-+|+..+- .++-...+..|..-.+.+.+..++. +.+. ++.+|
T Consensus 63 ~~d------------y--~~~~~adivvitaG~~~k~g~~R~dll~~N~~i~~~~~~~i~~~-~p~~~vivvs 120 (312)
T cd05293 63 DKD------------Y--SVTANSKVVIVTAGARQNEGESRLDLVQRNVDIFKGIIPKLVKY-SPNAILLVVS 120 (312)
T ss_pred CCC------------H--HHhCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHh-CCCcEEEEcc
Confidence 22 1 125789999999997543 3556677899999999999888886 3333 34343
|
L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed of eukaryotic LDHs. Vertebrate LDHs are non-allosteric. This is in contrast to some bacterial LDHs that are activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others. |
| >KOG1198 consensus Zinc-binding oxidoreductase [Energy production and conversion; General function prediction only] | Back alignment and domain information |
|---|
Probab=92.32 E-value=0.37 Score=49.66 Aligned_cols=40 Identities=18% Similarity=0.091 Sum_probs=29.2
Q ss_pred cCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcc
Q 010075 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADID 52 (519)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~ 52 (519)
=+|+.|||.||+|.+|...+.-....+ . ..++.++++.+.
T Consensus 156 ~~g~~vLv~ggsggVG~~aiQlAk~~~--~-~~v~t~~s~e~~ 195 (347)
T KOG1198|consen 156 SKGKSVLVLGGSGGVGTAAIQLAKHAG--A-IKVVTACSKEKL 195 (347)
T ss_pred CCCCeEEEEeCCcHHHHHHHHHHHhcC--C-cEEEEEcccchH
Confidence 467899999999999999887666544 2 445556665544
|
|
| >PRK00258 aroE shikimate 5-dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=92.23 E-value=0.36 Score=48.18 Aligned_cols=37 Identities=30% Similarity=0.453 Sum_probs=31.9
Q ss_pred cCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecC
Q 010075 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAA 49 (519)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~ 49 (519)
..+++|+|+|+ |.+|+.++..|...| +.+|++..|+.
T Consensus 121 ~~~k~vlVlGa-Gg~a~ai~~aL~~~g--~~~V~v~~R~~ 157 (278)
T PRK00258 121 LKGKRILILGA-GGAARAVILPLLDLG--VAEITIVNRTV 157 (278)
T ss_pred CCCCEEEEEcC-cHHHHHHHHHHHHcC--CCEEEEEeCCH
Confidence 56799999996 999999999999876 36899999974
|
|
| >cd01489 Uba2_SUMO Ubiquitin activating enzyme (E1) subunit UBA2 | Back alignment and domain information |
|---|
Probab=92.15 E-value=1.7 Score=43.97 Aligned_cols=122 Identities=13% Similarity=0.126 Sum_probs=70.8
Q ss_pred EEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHH----HHHHhh---hhhHHHHHhhhccccccccCCc
Q 010075 14 TILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRF----QNEVLA---KDVFNVLKEKWGTRLNSFISEK 86 (519)
Q Consensus 14 ~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl----~~~~~~---~~~f~~l~~~~~~~~~~~~~~~ 86 (519)
+|||.|+ |.+|..+++.|...| |++|.++....-..+-..|- .+++-+ ...-+++++..| .-+
T Consensus 1 kVlIVGa-GGlG~EiaKnLal~G--vg~ItIvD~D~Ve~sNLnRQflf~~~dVGk~Kaevaa~~l~~lNp-------~v~ 70 (312)
T cd01489 1 KVLVVGA-GGIGCELLKNLVLTG--FGEIHIIDLDTIDLSNLNRQFLFRKKHVGKSKAQVAKEAVLSFNP-------NVK 70 (312)
T ss_pred CEEEECC-CHHHHHHHHHHHHhc--CCeEEEEcCCCcchhhcCcCccCChhHcCcHHHHHHHHHHHHHCC-------CCe
Confidence 4899995 889999999999887 57888876543222111110 000100 111234444333 246
Q ss_pred eEEEeccCCCCCCCCChhhhHHHHhcCccEEEEcCccCCccccHHHHHHHhHHHHHHHHHHHHhccCCceEEEEecceee
Q 010075 87 ITFVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKFDERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAYVA 166 (519)
Q Consensus 87 v~~v~gDl~~~~lgls~~~~~~~l~~~vdiViH~Aa~v~f~~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V~vSTa~v~ 166 (519)
++.+.+++++. +.....+++.|+||.+... ...-..+-++|... + ..||...|.+..
T Consensus 71 V~~~~~~i~~~-------~~~~~f~~~~DvVv~a~Dn--------------~~ar~~in~~c~~~-~-ip~I~~gt~G~~ 127 (312)
T cd01489 71 IVAYHANIKDP-------DFNVEFFKQFDLVFNALDN--------------LAARRHVNKMCLAA-D-VPLIESGTTGFL 127 (312)
T ss_pred EEEEeccCCCc-------cchHHHHhcCCEEEECCCC--------------HHHHHHHHHHHHHC-C-CCEEEEecCcce
Confidence 77788888742 1122566789999988543 12223344566664 3 568888877766
Q ss_pred cC
Q 010075 167 GE 168 (519)
Q Consensus 167 ~~ 168 (519)
|.
T Consensus 128 G~ 129 (312)
T cd01489 128 GQ 129 (312)
T ss_pred eE
Confidence 64
|
UBA2 is part of the heterodimeric activating enzyme (E1), specific for the SUMO family of ubiquitin-like proteins (Ubls). E1 enzymes are part of a conjugation cascade to attach Ub or Ubls, covalently to substrate proteins consisting of activating (E1), conjugating (E2), and/or ligating (E3) enzymes. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and Ubls C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Post-translational modification by SUMO family of ubiquitin-like proteins (Ublps) is involved in cell division, nuclear transport, the stress response and signal transduction. UBA2 contains both the nucleotide-binding motif involved in adenylation and the catalytic cysteine involved in the thioester intermediate and Ublp transfer to E2. |
| >cd05295 MDH_like Malate dehydrogenase-like | Back alignment and domain information |
|---|
Probab=91.90 E-value=5.1 Score=42.68 Aligned_cols=120 Identities=8% Similarity=0.006 Sum_probs=69.2
Q ss_pred CEEEEeCCccHHHHHHHHHHHHh---CCCc-cEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceE
Q 010075 13 KTILVSGVTGFVAKVFIEKILRV---QPNV-KKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKIT 88 (519)
Q Consensus 13 k~VlITGaTGFlG~~Lv~~LL~~---g~~v-~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~ 88 (519)
-+|.||||+|.||.+|+-.|.+- |++- -.+.++..+...... +-..-++.+.. .| + ...+.
T Consensus 124 ~~V~vtgAag~i~Y~l~~~ia~G~~fG~~~~v~L~LlDi~~~~~~l-~G~amDL~D~a--------~p-----l-l~~v~ 188 (452)
T cd05295 124 LQVCITNASAPLCYHLIPSLASGEVFGMEEEISIHLLDSPENLEKL-KGLVMEVEDLA--------FP-----L-LRGIS 188 (452)
T ss_pred eEEEEecCcHHHHHHHHHHHhCCcccCCCCeEEEEEEcCCCchhhH-HHHHHHHHHhH--------Hh-----h-cCCcE
Confidence 57999999999999999998761 2221 134444443222111 11111121110 00 0 12233
Q ss_pred EEeccCCCCCCCCChhhhHHHHhcCccEEEEcCccCCc-cccHHHHHHHhHHHHHHHHHHHHhccC-CceEEEEe
Q 010075 89 FVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF-DERYDVAFGINTLGVIHLVNFAKKCVK-LKVFVHVS 161 (519)
Q Consensus 89 ~v~gDl~~~~lgls~~~~~~~l~~~vdiViH~Aa~v~f-~~~~~~~~~~Nv~gt~~ll~~a~~~~~-l~~~V~vS 161 (519)
+..+| ...+.++|+||-+||..+- .+...+.++.|+.-.+.+.+...+... -.+++.+.
T Consensus 189 i~~~~--------------~ea~~daDvvIitag~prk~G~~R~DLL~~N~~Ifk~~g~~I~~~a~~~~~VlVv~ 249 (452)
T cd05295 189 VTTDL--------------DVAFKDAHVIVLLDDFLIKEGEDLEGCIRSRVAICQLYGPLIEKNAKEDVKVIVAG 249 (452)
T ss_pred EEECC--------------HHHhCCCCEEEECCCCCCCcCCCHHHHHHHHHHHHHHHHHHHHHhCCCCCeEEEEe
Confidence 33211 1446789999999998543 456777899999999999888877533 13444444
|
These MDH-like proteins are related to other groups in the MDH family but do not have conserved substrate and cofactor binding residues. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subgroup are uncharacterized MDH-like proteins from animals. They are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others. |
| >PRK06728 aspartate-semialdehyde dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=91.81 E-value=0.37 Score=49.47 Aligned_cols=37 Identities=24% Similarity=0.347 Sum_probs=28.1
Q ss_pred CCEEEEeCCccHHHHHHHHHHHH-hCCCccEEEEEEec
Q 010075 12 NKTILVSGVTGFVAKVFIEKILR-VQPNVKKLYLFVRA 48 (519)
Q Consensus 12 ~k~VlITGaTGFlG~~Lv~~LL~-~g~~v~~V~~LvR~ 48 (519)
+.+|.|.||||++|..|++.|.+ ..-++.++..+...
T Consensus 5 ~~~VaIvGATG~vG~ell~lL~~h~~f~v~~l~~~aS~ 42 (347)
T PRK06728 5 GYHVAVVGATGAVGQKIIELLEKETKFNIAEVTLLSSK 42 (347)
T ss_pred CCEEEEEeCCCHHHHHHHHHHHHCCCCCcccEEEEECc
Confidence 46899999999999999998884 34445556666543
|
|
| >TIGR01757 Malate-DH_plant malate dehydrogenase, NADP-dependent | Back alignment and domain information |
|---|
Probab=91.51 E-value=5.7 Score=41.55 Aligned_cols=118 Identities=12% Similarity=0.087 Sum_probs=69.0
Q ss_pred CCEEEEeCCccHHHHHHHHHHHHhCCCcc---EEEE--E--EecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccC
Q 010075 12 NKTILVSGVTGFVAKVFIEKILRVQPNVK---KLYL--F--VRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFIS 84 (519)
Q Consensus 12 ~k~VlITGaTGFlG~~Lv~~LL~~g~~v~---~V~~--L--vR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~ 84 (519)
--+|.|+||+|.+|..++-.|+..+- .. +|.+ + .+.+.....+ .+ ++.+.. .+ + .
T Consensus 44 p~KV~IIGAaG~VG~~~A~~l~~~~l-~~~~~ei~L~L~diD~~~~~a~g~-a~--DL~d~a--------~~-----~-~ 105 (387)
T TIGR01757 44 TVNVAVSGAAGMISNHLLFMLASGEV-FGQDQPIALKLLGSERSKEALEGV-AM--ELEDSL--------YP-----L-L 105 (387)
T ss_pred CeEEEEECCCcHHHHHHHHHHHhccc-cCCCCceEEEEeccCccchhhhHH-HH--HHHHhh--------hh-----h-c
Confidence 35899999999999999999987542 22 1222 2 3332221111 11 121110 00 0 1
Q ss_pred CceEEEeccCCCCCCCCChhhhHHHHhcCccEEEEcCccCC-ccccHHHHHHHhHHHHHHHHHHHHhccCCceEEEEe
Q 010075 85 EKITFVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITK-FDERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVS 161 (519)
Q Consensus 85 ~~v~~v~gDl~~~~lgls~~~~~~~l~~~vdiViH~Aa~v~-f~~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V~vS 161 (519)
.++.+..+| . ..+.+.|+||-+||..+ ..++-.+.+..|+.-.+.+.....+..+...++.+-
T Consensus 106 ~~v~i~~~~------------y--~~~kdaDIVVitAG~prkpg~tR~dll~~N~~I~k~i~~~I~~~a~~~~iviVV 169 (387)
T TIGR01757 106 REVSIGIDP------------Y--EVFEDADWALLIGAKPRGPGMERADLLDINGQIFADQGKALNAVASKNCKVLVV 169 (387)
T ss_pred CceEEecCC------------H--HHhCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEc
Confidence 122222222 1 34578999999999864 345677789999999999999888853344444333
|
This model represents the NADP-dependent malate dehydrogenase found in plants, mosses and green algae and localized to the chloroplast. Malate dehydrogenase converts oxaloacetate into malate, a critical step in the C4 cycle which allows circumvention of the effects of photorespiration. Malate is subsequenctly transported from the chloroplast to the cytoplasm (and then to the bundle sheath cells in C4 plants). The plant and moss enzymes are light regulated via cysteine disulfide bonds. The enzyme from Sorghum has been crystallized. |
| >PRK00048 dihydrodipicolinate reductase; Provisional | Back alignment and domain information |
|---|
Probab=91.47 E-value=0.68 Score=45.65 Aligned_cols=33 Identities=21% Similarity=0.353 Sum_probs=24.9
Q ss_pred CEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEe
Q 010075 13 KTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVR 47 (519)
Q Consensus 13 k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR 47 (519)
++|.|+|++|.+|+.+++.+.+ .+++ ++..++.
T Consensus 2 mkV~IiG~~G~mG~~i~~~l~~-~~~~-elvav~d 34 (257)
T PRK00048 2 IKVAVAGASGRMGRELIEAVEA-AEDL-ELVAAVD 34 (257)
T ss_pred cEEEEECCCCHHHHHHHHHHHh-CCCC-EEEEEEe
Confidence 5899999999999999987765 3554 4555443
|
|
| >KOG4022 consensus Dihydropteridine reductase DHPR/QDPR [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=91.45 E-value=11 Score=34.27 Aligned_cols=30 Identities=17% Similarity=0.114 Sum_probs=24.8
Q ss_pred CCEEEEeCCccHHHHHHHHHHHHhCCCccE
Q 010075 12 NKTILVSGVTGFVAKVFIEKILRVQPNVKK 41 (519)
Q Consensus 12 ~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~ 41 (519)
-.+|+|-||-|-+|+++++.+-..++-|..
T Consensus 3 agrVivYGGkGALGSacv~~FkannywV~s 32 (236)
T KOG4022|consen 3 AGRVIVYGGKGALGSACVEFFKANNYWVLS 32 (236)
T ss_pred CceEEEEcCcchHhHHHHHHHHhcCeEEEE
Confidence 357999999999999999999887754433
|
|
| >cd00650 LDH_MDH_like NAD-dependent, lactate dehydrogenase-like, 2-hydroxycarboxylate dehydrogenase family | Back alignment and domain information |
|---|
Probab=91.28 E-value=2.8 Score=41.34 Aligned_cols=107 Identities=13% Similarity=0.051 Sum_probs=65.0
Q ss_pred EEEeCCccHHHHHHHHHHHHhCC-CccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEEecc
Q 010075 15 ILVSGVTGFVAKVFIEKILRVQP-NVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVPGD 93 (519)
Q Consensus 15 VlITGaTGFlG~~Lv~~LL~~g~-~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v~gD 93 (519)
|.|.||+|.+|..++..|+..+. .+.+|++..+.+........ ++.+. . ... ....+..
T Consensus 1 I~IIGagG~vG~~ia~~l~~~~~~~~~el~L~D~~~~~l~~~~~---dl~~~------~--------~~~-~~~~i~~-- 60 (263)
T cd00650 1 IAVIGAGGNVGPALAFGLADGSVLLAIELVLYDIDEEKLKGVAM---DLQDA------V--------EPL-ADIKVSI-- 60 (263)
T ss_pred CEEECCCChHHHHHHHHHHhCCCCcceEEEEEeCCcccchHHHH---HHHHh------h--------hhc-cCcEEEE--
Confidence 57899999999999999987651 33578888876533222111 11000 0 000 0111111
Q ss_pred CCCCCCCCChhhhHHHHhcCccEEEEcCccCCcc-ccHHHHHHHhHHHHHHHHHHHHhc
Q 010075 94 ISSEDLGLKDSNLKEELWNELDIMVNSAAITKFD-ERYDVAFGINTLGVIHLVNFAKKC 151 (519)
Q Consensus 94 l~~~~lgls~~~~~~~l~~~vdiViH~Aa~v~f~-~~~~~~~~~Nv~gt~~ll~~a~~~ 151 (519)
+ .+. ...+.+.|+||-+|+..+.. ..-......|+.-.+.+.+..++.
T Consensus 61 -~--------~d~-~~~~~~aDiVv~t~~~~~~~g~~r~~~~~~n~~i~~~i~~~i~~~ 109 (263)
T cd00650 61 -T--------DDP-YEAFKDADVVIITAGVGRKPGMGRLDLLKRNVPIVKEIGDNIEKY 109 (263)
T ss_pred -C--------Cch-HHHhCCCCEEEECCCCCCCcCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 1 111 24557899999999876543 344556778999999998888775
|
Members of this family include ubiquitous enzymes like L-lactate dehydrogenases (LDH), L-2-hydroxyisocaproate dehydrogenases, and some malate dehydrogenases (MDH). LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH/MDH-like proteins are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains |
| >cd01065 NAD_bind_Shikimate_DH NAD(P) binding domain of Shikimate dehydrogenase | Back alignment and domain information |
|---|
Probab=91.21 E-value=0.69 Score=41.33 Aligned_cols=37 Identities=22% Similarity=0.351 Sum_probs=30.6
Q ss_pred cCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecC
Q 010075 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAA 49 (519)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~ 49 (519)
.++++|+|+|+ |.+|..+++.|.+.+ ..+|++..|+.
T Consensus 17 ~~~~~i~iiG~-G~~g~~~a~~l~~~g--~~~v~v~~r~~ 53 (155)
T cd01065 17 LKGKKVLILGA-GGAARAVAYALAELG--AAKIVIVNRTL 53 (155)
T ss_pred CCCCEEEEECC-cHHHHHHHHHHHHCC--CCEEEEEcCCH
Confidence 46799999997 999999999999875 36788887764
|
Shikimate dehydrogenase (DH) is an amino acid DH family member. Shikimate pathway links metabolism of carbohydrates to de novo biosynthesis of aromatic amino acids, quinones and folate. It is essential in plants, bacteria, and fungi but absent in mammals, thus making enzymes involved in this pathway ideal targets for broad spectrum antibiotics and herbicides. Shikimate DH catalyzes the reduction of 3-hydroshikimate to shikimate using the cofactor NADH. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann |
| >cd01080 NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of methylene-tetrahydrofolate dehydrogenase/cyclohydrolase | Back alignment and domain information |
|---|
Probab=91.20 E-value=0.77 Score=42.20 Aligned_cols=36 Identities=19% Similarity=0.286 Sum_probs=30.1
Q ss_pred cCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEec
Q 010075 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRA 48 (519)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~ 48 (519)
+.|++|+|.|+++.+|..+++.|.+.+ .+|++..|.
T Consensus 42 l~gk~vlViG~G~~~G~~~a~~L~~~g---~~V~v~~r~ 77 (168)
T cd01080 42 LAGKKVVVVGRSNIVGKPLAALLLNRN---ATVTVCHSK 77 (168)
T ss_pred CCCCEEEEECCcHHHHHHHHHHHhhCC---CEEEEEECC
Confidence 588999999997788999999999877 367777664
|
NADP binding domain of the Methylene-Tetrahydrofolate Dehydrogenase/cyclohydrolase (m-THF DH/cyclohydrolase) bifunctional enzyme. Tetrahydrofolate is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofucntional DH, as well a |
| >COG1179 Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 1 [Coenzyme metabolism] | Back alignment and domain information |
|---|
Probab=90.94 E-value=2.2 Score=41.20 Aligned_cols=129 Identities=19% Similarity=0.270 Sum_probs=69.9
Q ss_pred cCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHH---hhhhhHHHHHhhhccccccccCCc
Q 010075 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEV---LAKDVFNVLKEKWGTRLNSFISEK 86 (519)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~---~~~~~f~~l~~~~~~~~~~~~~~~ 86 (519)
++..+|.|.|. |.+|++.+|.|.|+| +.++.++.-..-..+-..|--..+ ...+.-+.+++..-.. . ..-+
T Consensus 28 l~~~~V~VvGi-GGVGSw~veALaRsG--ig~itlID~D~v~vTN~NRQi~A~~~~iGk~Kv~vm~eri~~I-n--P~c~ 101 (263)
T COG1179 28 LKQAHVCVVGI-GGVGSWAVEALARSG--IGRITLIDMDDVCVTNTNRQIHALLGDIGKPKVEVMKERIKQI-N--PECE 101 (263)
T ss_pred HhhCcEEEEec-CchhHHHHHHHHHcC--CCeEEEEecccccccccchhhHhhhhhcccHHHHHHHHHHHhh-C--CCce
Confidence 45678999985 669999999999987 577777654332222111211011 1112222233222100 0 0123
Q ss_pred eEEEeccCCCCCCCCChhhhHHHHhcCccEEEEcCccCCccccHHHHHHHhHHHHHHHHHHHHhccCCceEEEEecceee
Q 010075 87 ITFVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKFDERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAYVA 166 (519)
Q Consensus 87 v~~v~gDl~~~~lgls~~~~~~~l~~~vdiViH~Aa~v~f~~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V~vSTa~v~ 166 (519)
|..+..=++ ++...+.+..++|+||.+-- |+..-..|+..|++. +. -.+||..+.
T Consensus 102 V~~~~~f~t-------~en~~~~~~~~~DyvIDaiD--------------~v~~Kv~Li~~c~~~-ki---~vIss~Gag 156 (263)
T COG1179 102 VTAINDFIT-------EENLEDLLSKGFDYVIDAID--------------SVRAKVALIAYCRRN-KI---PVISSMGAG 156 (263)
T ss_pred EeehHhhhC-------HhHHHHHhcCCCCEEEEchh--------------hhHHHHHHHHHHHHc-CC---CEEeecccc
Confidence 444433334 33433233456999998853 345556788999985 33 456777766
Q ss_pred cCc
Q 010075 167 GER 169 (519)
Q Consensus 167 ~~~ 169 (519)
+..
T Consensus 157 ~k~ 159 (263)
T COG1179 157 GKL 159 (263)
T ss_pred CCC
Confidence 543
|
|
| >cd08259 Zn_ADH5 Alcohol dehydrogenases of the MDR family | Back alignment and domain information |
|---|
Probab=90.85 E-value=0.51 Score=47.56 Aligned_cols=37 Identities=22% Similarity=0.257 Sum_probs=31.8
Q ss_pred cCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecC
Q 010075 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAA 49 (519)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~ 49 (519)
-.+.+|+|+||+|.+|..+++.+...| .+|++++|+.
T Consensus 161 ~~~~~vlI~ga~g~vG~~~~~~a~~~g---~~v~~~~~~~ 197 (332)
T cd08259 161 KKGDTVLVTGAGGGVGIHAIQLAKALG---ARVIAVTRSP 197 (332)
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHcC---CeEEEEeCCH
Confidence 457899999999999999999999887 5778888754
|
NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group contains proteins that share the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenase family. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. |
| >PLN02602 lactate dehydrogenase | Back alignment and domain information |
|---|
Probab=90.81 E-value=7.4 Score=40.19 Aligned_cols=115 Identities=16% Similarity=0.137 Sum_probs=70.3
Q ss_pred CEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEEec
Q 010075 13 KTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVPG 92 (519)
Q Consensus 13 k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v~g 92 (519)
++|.|+|+ |.+|..++-.|+..+ -..+++++...+...... .+ ++.+.. .+ ..... +.+
T Consensus 38 ~KI~IIGa-G~VG~~~a~~l~~~~-l~~el~LiDi~~~~~~g~-a~--DL~~~~--------------~~-~~~~~-i~~ 96 (350)
T PLN02602 38 TKVSVVGV-GNVGMAIAQTILTQD-LADELALVDVNPDKLRGE-ML--DLQHAA--------------AF-LPRTK-ILA 96 (350)
T ss_pred CEEEEECC-CHHHHHHHHHHHhCC-CCCEEEEEeCCCchhhHH-HH--HHHhhh--------------hc-CCCCE-EEe
Confidence 69999996 999999999888754 335788888765332221 11 121110 01 11222 222
Q ss_pred cCCCCCCCCChhhhHHHHhcCccEEEEcCccCC-ccccHHHHHHHhHHHHHHHHHHHHhccCCc-eEEEEe
Q 010075 93 DISSEDLGLKDSNLKEELWNELDIMVNSAAITK-FDERYDVAFGINTLGVIHLVNFAKKCVKLK-VFVHVS 161 (519)
Q Consensus 93 Dl~~~~lgls~~~~~~~l~~~vdiViH~Aa~v~-f~~~~~~~~~~Nv~gt~~ll~~a~~~~~l~-~~V~vS 161 (519)
+ .+. ..+.+.|+||-+|+..+ ..++-.+.+..|+.-.+.+.+..++. ..+ .++.+|
T Consensus 97 ~----------~dy--~~~~daDiVVitAG~~~k~g~tR~dll~~N~~I~~~i~~~I~~~-~p~~ivivvt 154 (350)
T PLN02602 97 S----------TDY--AVTAGSDLCIVTAGARQIPGESRLNLLQRNVALFRKIIPELAKY-SPDTILLIVS 154 (350)
T ss_pred C----------CCH--HHhCCCCEEEECCCCCCCcCCCHHHHHHHHHHHHHHHHHHHHHH-CCCeEEEEec
Confidence 1 111 23578999999999754 23456677888999999988888775 333 344444
|
|
| >PRK06153 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=90.60 E-value=2.3 Score=44.11 Aligned_cols=125 Identities=15% Similarity=0.237 Sum_probs=69.8
Q ss_pred hhhhcCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHH-----HHHhh-hhhHHHHHhhhcccc
Q 010075 6 VVEFLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQ-----NEVLA-KDVFNVLKEKWGTRL 79 (519)
Q Consensus 6 i~~~~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~-----~~~~~-~~~f~~l~~~~~~~~ 79 (519)
+++-+++++|+|.| .|.+|+.+++.|.+.| |.+|.++.-..-..+-..|.. +++-+ .+.-+.+++....
T Consensus 170 ~q~kL~~~~VaIVG-~GG~GS~Va~~LAR~G--VgeI~LVD~D~Ve~SNLnRQ~gaf~~~DvGk~~~KVevaa~rl~~-- 244 (393)
T PRK06153 170 LSAKLEGQRIAIIG-LGGTGSYILDLVAKTP--VREIHLFDGDDFLQHNAFRSPGAASIEELREAPKKVDYFKSRYSN-- 244 (393)
T ss_pred HHHHHhhCcEEEEc-CCccHHHHHHHHHHcC--CCEEEEECCCEecccccccccccCCHhHcCCcchHHHHHHHHHHH--
Confidence 36678889999999 5669999999999986 678888755432222122210 01111 0112223222211
Q ss_pred ccccCCceEEEeccCCCCCCCCChhhhHHHHhcCccEEEEcCccCCccccHHHHHHHhHHHHHHHHHHHHhccCCceEEE
Q 010075 80 NSFISEKITFVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKFDERYDVAFGINTLGVIHLVNFAKKCVKLKVFVH 159 (519)
Q Consensus 80 ~~~~~~~v~~v~gDl~~~~lgls~~~~~~~l~~~vdiViH~Aa~v~f~~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V~ 159 (519)
...++.++...++ ++. . ..+.++|+||-|.-. ..+-..+.++|.+. + ..+|.
T Consensus 245 ---in~~I~~~~~~I~-------~~n-~-~~L~~~DiV~dcvDn--------------~~aR~~ln~~a~~~-g-IP~Id 296 (393)
T PRK06153 245 ---MRRGIVPHPEYID-------EDN-V-DELDGFTFVFVCVDK--------------GSSRKLIVDYLEAL-G-IPFID 296 (393)
T ss_pred ---hCCeEEEEeecCC-------HHH-H-HHhcCCCEEEEcCCC--------------HHHHHHHHHHHHHc-C-CCEEE
Confidence 1235666665554 333 2 345789999999742 33333455666664 3 34666
Q ss_pred Eecc
Q 010075 160 VSTA 163 (519)
Q Consensus 160 vSTa 163 (519)
++-.
T Consensus 297 ~G~~ 300 (393)
T PRK06153 297 VGMG 300 (393)
T ss_pred eeec
Confidence 5543
|
|
| >cd01484 E1-2_like Ubiquitin activating enzyme (E1), repeat 2-like | Back alignment and domain information |
|---|
Probab=90.54 E-value=2.7 Score=40.79 Aligned_cols=123 Identities=10% Similarity=0.125 Sum_probs=71.6
Q ss_pred EEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHH---H-HHHhh---hhhHHHHHhhhccccccccCCc
Q 010075 14 TILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRF---Q-NEVLA---KDVFNVLKEKWGTRLNSFISEK 86 (519)
Q Consensus 14 ~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl---~-~~~~~---~~~f~~l~~~~~~~~~~~~~~~ 86 (519)
+|+|.| .|.+|..+++.|...| |+++.++....-..+-..|- . +++-+ ...-+++++..| .-+
T Consensus 1 kVlvvG-~GGlG~eilk~La~~G--vg~i~ivD~D~Ve~sNLnRQflf~~~dvGk~Ka~va~~~l~~~np-------~v~ 70 (234)
T cd01484 1 KVLLVG-AGGIGCELLKNLALMG--FGQIHVIDMDTIDVSNLNRQFLFRPKDIGRPKSEVAAEAVNDRNP-------NCK 70 (234)
T ss_pred CEEEEC-CCHHHHHHHHHHHHcC--CCeEEEEeCCEEcchhhccccCCChhhCChHHHHHHHHHHHHHCC-------CCE
Confidence 478888 6779999999999976 57888877654332222220 0 01100 001233444443 246
Q ss_pred eEEEeccCCCCCCCCChhhhHHHHhcCccEEEEcCccCCccccHHHHHHHhHHHHHHHHHHHHhccCCceEEEEecceee
Q 010075 87 ITFVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKFDERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAYVA 166 (519)
Q Consensus 87 v~~v~gDl~~~~lgls~~~~~~~l~~~vdiViH~Aa~v~f~~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V~vSTa~v~ 166 (519)
++.+..++.+. .+......+++|+||.+... +..-+.+-++|.+. + ..+|+.+|....
T Consensus 71 i~~~~~~i~~~------~~~~~~f~~~~DvVi~a~Dn--------------~~aR~~ln~~c~~~-~-iplI~~g~~G~~ 128 (234)
T cd01484 71 VVPYQNKVGPE------QDFNDTFFEQFHIIVNALDN--------------IIARRYVNGMLIFL-I-VPLIESGTEGFK 128 (234)
T ss_pred EEEEeccCChh------hhchHHHHhCCCEEEECCCC--------------HHHHHHHHHHHHHc-C-CCEEEEcccCCc
Confidence 77788888631 22223567889999987532 22333455666664 3 568888776655
Q ss_pred cC
Q 010075 167 GE 168 (519)
Q Consensus 167 ~~ 168 (519)
|.
T Consensus 129 G~ 130 (234)
T cd01484 129 GN 130 (234)
T ss_pred eE
Confidence 53
|
E1, a highly conserved small protein present universally in eukaryotic cells, is part of cascade to attach ubiquitin (Ub) covalently to substrate proteins. This cascade consists of activating (E1), conjugating (E2), and/or ligating (E3) enzymes and then targets them for degradation by the 26S proteasome. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and ubiquitin's C-terminus. E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. A set of novel molecules with a structural similarity to Ub, called Ub-like proteins (Ubls), have similar conjugation cascades. In contrast to ubiquitin-E1, which is a single-chain protein with a weakly conserved two-fold repeat, many of the Ubls-E1are a heterodimer where each subunit corresponds to one half of a single-chain E1. This CD represents the family homologou |
| >PRK08664 aspartate-semialdehyde dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=90.52 E-value=0.36 Score=49.84 Aligned_cols=35 Identities=17% Similarity=0.362 Sum_probs=28.7
Q ss_pred CEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecC
Q 010075 13 KTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAA 49 (519)
Q Consensus 13 k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~ 49 (519)
++|+|+||||++|+.|++.|++ .|++ ++.++.++.
T Consensus 4 ~~V~I~GatG~iG~~l~~~L~~-~p~~-el~~~~~s~ 38 (349)
T PRK08664 4 LKVGILGATGMVGQRFVQLLAN-HPWF-EVTALAASE 38 (349)
T ss_pred cEEEEECCCCHHHHHHHHHHHc-CCCc-eEEEEEcCh
Confidence 6899999999999999998886 4554 777775554
|
|
| >TIGR00507 aroE shikimate 5-dehydrogenase | Back alignment and domain information |
|---|
Probab=90.43 E-value=0.58 Score=46.42 Aligned_cols=35 Identities=20% Similarity=0.340 Sum_probs=29.8
Q ss_pred CCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecC
Q 010075 11 ENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAA 49 (519)
Q Consensus 11 ~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~ 49 (519)
++++++|+|+ |.+|+.++..|++.| .+|++..|+.
T Consensus 116 ~~k~vliiGa-Gg~g~aia~~L~~~g---~~v~v~~R~~ 150 (270)
T TIGR00507 116 PNQRVLIIGA-GGAARAVALPLLKAD---CNVIIANRTV 150 (270)
T ss_pred cCCEEEEEcC-cHHHHHHHHHHHHCC---CEEEEEeCCH
Confidence 4789999997 899999999999876 4788888764
|
This model finds proteins from prokaryotes and functionally equivalent domains from larger, multifunctional proteins of fungi and plants. Below the trusted cutoff of 180, but above the noise cutoff of 20, are the putative shikimate dehydrogenases of Thermotoga maritima and Mycobacterium tuberculosis, and uncharacterized paralogs of shikimate dehydrogenase from E. coli and H. influenzae. The related enzyme quinate 5-dehydrogenase scores below the noise cutoff. A neighbor-joining tree, constructed with quinate 5-dehydrogenases as the outgroup, shows the Clamydial homolog as clustering among the shikimate dehydrogenases, although the sequence is unusual in the degree of sequence divergence and the presence of an additional N-terminal domain. |
| >PF02254 TrkA_N: TrkA-N domain; InterPro: IPR003148 The regulator of K+ conductance (RCK) domain is found in many ligand-gated K+ channels, most often attached to the intracellular carboxy terminus | Back alignment and domain information |
|---|
Probab=90.17 E-value=4.1 Score=34.28 Aligned_cols=71 Identities=14% Similarity=0.222 Sum_probs=45.1
Q ss_pred EEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEEeccC
Q 010075 15 ILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVPGDI 94 (519)
Q Consensus 15 VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v~gDl 94 (519)
|+|.|. |-+|+.+++.|.+.+ .+|.++.+.+.. .+.+. ...+.++.||.
T Consensus 1 vvI~G~-g~~~~~i~~~L~~~~---~~vvvid~d~~~---~~~~~------------------------~~~~~~i~gd~ 49 (116)
T PF02254_consen 1 VVIIGY-GRIGREIAEQLKEGG---IDVVVIDRDPER---VEELR------------------------EEGVEVIYGDA 49 (116)
T ss_dssp EEEES--SHHHHHHHHHHHHTT---SEEEEEESSHHH---HHHHH------------------------HTTSEEEES-T
T ss_pred eEEEcC-CHHHHHHHHHHHhCC---CEEEEEECCcHH---HHHHH------------------------hcccccccccc
Confidence 577885 789999999999954 577887776422 11111 14578999999
Q ss_pred CCCCCCCChhhhHHHHhcCccEEEEcCc
Q 010075 95 SSEDLGLKDSNLKEELWNELDIMVNSAA 122 (519)
Q Consensus 95 ~~~~lgls~~~~~~~l~~~vdiViH~Aa 122 (519)
++ ...+.+.-+++.+.|+=+..
T Consensus 50 ~~------~~~l~~a~i~~a~~vv~~~~ 71 (116)
T PF02254_consen 50 TD------PEVLERAGIEKADAVVILTD 71 (116)
T ss_dssp TS------HHHHHHTTGGCESEEEEESS
T ss_pred hh------hhHHhhcCccccCEEEEccC
Confidence 95 33333233467888875543
|
The domain is prevalent among prokaryotic K+ channels, and also found in eukaryotic, high-conductance Ca2+-activated K+ channels (BK channels) [, , ]. Largely involved in redox-linked regulation of potassium channels, the N-terminal part of the RCK domain is predicted to be an active dehydrogenase at least in some cases []. Some have a conserved sequence motif (G-x-G-x-x-G-x(n)-[DE]) for NAD+ binding [], but others do not, reflecting the diversity of ligands for RCK domains. The C-terminal part is less conserved, being absent in some channels, such as the kefC antiporter from Escherichia coli. It is predicted to bind unidentified ligands and to regulate sulphate, sodium and other transporters. The X-ray structure of several RCK domains has been solved [, , ]. It reveals an alpha-beta fold similar to dehydrogenase enzymes. The domain forms a homodimer, producing a cleft between two lobes. It has a composite structure, with an N-terminal (RCK-N), and a C-terminal (RCK-C) subdomain. The RCK-N subdomain forms a Rossmann fold with two alpha helices on one side of a six stranded parallel beta sheet and three alpha helices on the other side. The RCK-C subdomain is an all-beta-strand fold. It forms an extention of the dimer interface and further stabilises the RCK homodimer [, , ]. Ca2+ is a ligand that opens the channel in a concentration-dependent manner. Two Ca2+ ions are located at the base of a cleft between two RCK domains, coordinated by the carboxylate groups of two glutamate residues, and by an aspartate residue [, , ]. RCK domains occur in at least five different contexts: As a single domain on the C terminus of some K+ channels (for example, many prokaryotic K+ channels). As two tandem RCK domains on the C terminus of some transporters that form gating rings (for example, eukaryotic BK channels). The gating ring has an arrangement of eight identical RCK domains, one from each of the four pore-forming subunits and four from the intracellular solution. As two domains, one at the N terminus and another at the C terminus of transporter (for example, the prokaryotic trk system potassium uptake protein A). As a soluble protein (not part of a K+ channel) consisting of two tandem RCK domains. As a soluble protein consisting of a single RCK domain. This entry represents the N-terminal subdomain of RCK.; GO: 0006813 potassium ion transport; PDB: 3L4B_E 1LSS_C 3LLV_A 2FY8_D 2AEF_A 1LNQ_E 3RBX_C 3KXD_A 2AEJ_A 3RBZ_A .... |
| >PTZ00117 malate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=90.07 E-value=4.3 Score=41.35 Aligned_cols=118 Identities=16% Similarity=0.215 Sum_probs=69.8
Q ss_pred cCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 010075 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (519)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (519)
.+.++|.|.|| |.+|..++..|+..+ +..|.++.+....... +.+. +.. . .........
T Consensus 3 ~~~~KI~IIGa-G~vG~~ia~~l~~~~--~~~l~L~Di~~~~~~g-~~lD--l~~-----------~---~~~~~~~~~- 61 (319)
T PTZ00117 3 VKRKKISMIGA-GQIGSTVALLILQKN--LGDVVLYDVIKGVPQG-KALD--LKH-----------F---STLVGSNIN- 61 (319)
T ss_pred CCCcEEEEECC-CHHHHHHHHHHHHCC--CCeEEEEECCCccchh-HHHH--Hhh-----------h---ccccCCCeE-
Confidence 35689999997 999999998887765 3567888776543321 1111 100 0 000001111
Q ss_pred EeccCCCCCCCCChhhhHHHHhcCccEEEEcCccCCc-cccHHHHHHHhHHHHHHHHHHHHhccCCce-EEEEe
Q 010075 90 VPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF-DERYDVAFGINTLGVIHLVNFAKKCVKLKV-FVHVS 161 (519)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~~~vdiViH~Aa~v~f-~~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~-~V~vS 161 (519)
+.+ ..+. +.+.+.|+||-+|+..+. .......+..|..-.+.+.+...+. ..+. ++.+|
T Consensus 62 i~~----------~~d~--~~l~~ADiVVitag~~~~~g~~r~dll~~n~~i~~~i~~~i~~~-~p~a~vivvs 122 (319)
T PTZ00117 62 ILG----------TNNY--EDIKDSDVVVITAGVQRKEEMTREDLLTINGKIMKSVAESVKKY-CPNAFVICVT 122 (319)
T ss_pred EEe----------CCCH--HHhCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH-CCCeEEEEec
Confidence 111 0122 244789999999987543 3456667888888777887777765 3344 55554
|
|
| >PRK14192 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=89.91 E-value=0.97 Score=45.20 Aligned_cols=35 Identities=17% Similarity=0.256 Sum_probs=29.6
Q ss_pred cCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEe
Q 010075 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVR 47 (519)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR 47 (519)
++||+|+|.|++|.+|+.++..|++.+ .+|++.-|
T Consensus 157 l~Gk~vvViG~gg~vGkpia~~L~~~g---atVtv~~~ 191 (283)
T PRK14192 157 LAGKHAVVVGRSAILGKPMAMMLLNAN---ATVTICHS 191 (283)
T ss_pred CCCCEEEEECCcHHHHHHHHHHHHhCC---CEEEEEeC
Confidence 579999999999999999999999887 35665544
|
|
| >PRK09496 trkA potassium transporter peripheral membrane component; Reviewed | Back alignment and domain information |
|---|
Probab=89.87 E-value=2.5 Score=45.00 Aligned_cols=76 Identities=18% Similarity=0.227 Sum_probs=49.7
Q ss_pred CCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEE
Q 010075 11 ENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFV 90 (519)
Q Consensus 11 ~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v 90 (519)
..++|+|.|+ |.+|+.+++.|.+.+ ..|+++.+... ..+++. ++ ...+.++
T Consensus 230 ~~~~iiIiG~-G~~g~~l~~~L~~~~---~~v~vid~~~~---~~~~~~-------------~~---------~~~~~~i 280 (453)
T PRK09496 230 PVKRVMIVGG-GNIGYYLAKLLEKEG---YSVKLIERDPE---RAEELA-------------EE---------LPNTLVL 280 (453)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHhCC---CeEEEEECCHH---HHHHHH-------------HH---------CCCCeEE
Confidence 3588999996 999999999999877 45667665432 112222 11 1356789
Q ss_pred eccCCCCCCCCChhhhHHHHhcCccEEEEcC
Q 010075 91 PGDISSEDLGLKDSNLKEELWNELDIMVNSA 121 (519)
Q Consensus 91 ~gDl~~~~lgls~~~~~~~l~~~vdiViH~A 121 (519)
.||.++ ...+.+...++.|.||-+.
T Consensus 281 ~gd~~~------~~~L~~~~~~~a~~vi~~~ 305 (453)
T PRK09496 281 HGDGTD------QELLEEEGIDEADAFIALT 305 (453)
T ss_pred ECCCCC------HHHHHhcCCccCCEEEECC
Confidence 999995 2333233456789888443
|
|
| >PRK12749 quinate/shikimate dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=89.73 E-value=2.1 Score=43.01 Aligned_cols=38 Identities=21% Similarity=0.289 Sum_probs=31.3
Q ss_pred cCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCC
Q 010075 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAAD 50 (519)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~ 50 (519)
.++++++|.|| |..+++++-.|...| +.+|++..|+..
T Consensus 122 ~~~k~vlvlGa-GGaarAi~~~l~~~g--~~~i~i~nRt~~ 159 (288)
T PRK12749 122 IKGKTMVLLGA-GGASTAIGAQGAIEG--LKEIKLFNRRDE 159 (288)
T ss_pred cCCCEEEEECC-cHHHHHHHHHHHHCC--CCEEEEEeCCcc
Confidence 46789999996 667999999898765 479999999854
|
|
| >cd05290 LDH_3 A subgroup of L-lactate dehydrogenases | Back alignment and domain information |
|---|
Probab=89.68 E-value=8.3 Score=39.05 Aligned_cols=115 Identities=13% Similarity=0.131 Sum_probs=71.0
Q ss_pred EEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccC-CceEEEec
Q 010075 14 TILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFIS-EKITFVPG 92 (519)
Q Consensus 14 ~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~-~~v~~v~g 92 (519)
+|.|.|+ |.+|..++..|+..+ -+.++.++...+....... + ++.... .+.. .++....+
T Consensus 1 Ki~IIGa-G~VG~~~a~~l~~~~-~~~elvL~Di~~~~a~g~a-~--DL~~~~--------------~~~~~~~~~i~~~ 61 (307)
T cd05290 1 KLVVIGA-GHVGSAVLNYALALG-LFSEIVLIDVNEGVAEGEA-L--DFHHAT--------------ALTYSTNTKIRAG 61 (307)
T ss_pred CEEEECC-CHHHHHHHHHHHhcC-CCCEEEEEeCCcchhhHHH-H--HHHhhh--------------ccCCCCCEEEEEC
Confidence 4788897 999999999998754 3467888877543222111 1 111110 1111 13333333
Q ss_pred cCCCCCCCCChhhhHHHHhcCccEEEEcCccCCc-ccc--HHHHHHHhHHHHHHHHHHHHhccCCceEEEEec
Q 010075 93 DISSEDLGLKDSNLKEELWNELDIMVNSAAITKF-DER--YDVAFGINTLGVIHLVNFAKKCVKLKVFVHVST 162 (519)
Q Consensus 93 Dl~~~~lgls~~~~~~~l~~~vdiViH~Aa~v~f-~~~--~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V~vST 162 (519)
| + +.+.+.|+||-+|+..+- .++ -.+.+..|+.-.+.+.+..++. +...++.+-|
T Consensus 62 ~------------y--~~~~~aDivvitaG~~~kpg~tr~R~dll~~N~~I~~~i~~~i~~~-~p~~i~ivvs 119 (307)
T cd05290 62 D------------Y--DDCADADIIVITAGPSIDPGNTDDRLDLAQTNAKIIREIMGNITKV-TKEAVIILIT 119 (307)
T ss_pred C------------H--HHhCCCCEEEECCCCCCCCCCCchHHHHHHHHHHHHHHHHHHHHHh-CCCeEEEEec
Confidence 3 1 345789999999998543 333 4677899999999999988876 4444544443
|
L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed of some bacterial LDHs from firmicutes, gammaproteobacteria, and actinobacteria. Vertebrate LDHs are non-allosteric, but some bacterial LDHs are activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenase, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others. |
| >PRK01710 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional | Back alignment and domain information |
|---|
Probab=89.62 E-value=2.1 Score=45.96 Aligned_cols=43 Identities=21% Similarity=0.413 Sum_probs=34.6
Q ss_pred CcchhhhcCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecC
Q 010075 3 LGSVVEFLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAA 49 (519)
Q Consensus 3 ~~~i~~~~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~ 49 (519)
..+..+|+.+++|+|.| .|-.|..+++.|++.| .+|.+..+.+
T Consensus 5 ~~~~~~~~~~~~i~v~G-~G~sG~a~a~~L~~~G---~~V~~~D~~~ 47 (458)
T PRK01710 5 FNEFKKFIKNKKVAVVG-IGVSNIPLIKFLVKLG---AKVTAFDKKS 47 (458)
T ss_pred HHHHhhhhcCCeEEEEc-ccHHHHHHHHHHHHCC---CEEEEECCCC
Confidence 34566788899999998 6779999999999998 5677777654
|
|
| >PF02670 DXP_reductoisom: 1-deoxy-D-xylulose 5-phosphate reductoisomerase; InterPro: IPR013512 1-deoxy-D-xylulose 5-phosphate reductoisomerase synthesises 2-C-methyl-D-erythritol 4-phosphate from 1-deoxy-D-xylulose 5-phosphate in a single step by intramolecular rearrangement and reduction and is responsible for terpenoid biosynthesis in some organisms [] | Back alignment and domain information |
|---|
Probab=89.61 E-value=3.3 Score=36.23 Aligned_cols=89 Identities=25% Similarity=0.386 Sum_probs=51.2
Q ss_pred EEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHh-------hhhhHHHHHhhhccccccccCCce
Q 010075 15 ILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVL-------AKDVFNVLKEKWGTRLNSFISEKI 87 (519)
Q Consensus 15 VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~-------~~~~f~~l~~~~~~~~~~~~~~~v 87 (519)
|.|.|+||-||+..++-+-+ .|+-.+|++|.-.++-....+... +.. +...++.+++..+.. ...+
T Consensus 1 i~ILGsTGSIG~qtLdVi~~-~~d~f~v~~Lsa~~n~~~L~~q~~-~f~p~~v~i~~~~~~~~l~~~~~~~-----~~~~ 73 (129)
T PF02670_consen 1 IAILGSTGSIGTQTLDVIRK-HPDKFEVVALSAGSNIEKLAEQAR-EFKPKYVVIADEEAYEELKKALPSK-----GPGI 73 (129)
T ss_dssp EEEESTTSHHHHHHHHHHHH-CTTTEEEEEEEESSTHHHHHHHHH-HHT-SEEEESSHHHHHHHHHHHHHT-----TSSS
T ss_pred CEEEcCCcHHHHHHHHHHHh-CCCceEEEEEEcCCCHHHHHHHHH-HhCCCEEEEcCHHHHHHHHHHhhhc-----CCCC
Confidence 67899999999998887766 577679999988665443333322 221 112344555544311 1355
Q ss_pred EEEeccCCCCCCCCChhhhHHHHh--cCccEEEEcC
Q 010075 88 TFVPGDISSEDLGLKDSNLKEELW--NELDIMVNSA 121 (519)
Q Consensus 88 ~~v~gDl~~~~lgls~~~~~~~l~--~~vdiViH~A 121 (519)
++..|+= .. .++. .++|+|+...
T Consensus 74 ~v~~G~~----------~l-~~~~~~~~~D~vv~Ai 98 (129)
T PF02670_consen 74 EVLSGPE----------GL-EELAEEPEVDIVVNAI 98 (129)
T ss_dssp EEEESHH----------HH-HHHHTHTT-SEEEE--
T ss_pred EEEeChH----------HH-HHHhcCCCCCEEEEeC
Confidence 6666542 22 2343 4799998754
|
In Arabidopsis thaliana 1-deoxy-D-xylulose 5-phosphate reductoisomerase is the first committed enzyme of the non-mevalonate pathway for isoprenoid biosynthesis. The enzyme requires Mn2+, Co2+ or Mg2+ for activity, with the first being most effective. This domain is found at the N terminus of bacterial and plant 1-deoxy-D-xylulose 5-phosphate reductoisomerases.; GO: 0070402 NADPH binding, 0055114 oxidation-reduction process; PDB: 1R0K_D 1R0L_C 3A14_A 3A06_A 3AUA_A 3AU9_B 3AU8_B 3IIE_A 2Y1D_B 4AIC_A .... |
| >PRK14851 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=89.54 E-value=4.2 Score=45.74 Aligned_cols=97 Identities=15% Similarity=0.177 Sum_probs=59.9
Q ss_pred hhhcCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHH-H---HHHHhhhhh----HHHHHhhhccc
Q 010075 7 VEFLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALR-F---QNEVLAKDV----FNVLKEKWGTR 78 (519)
Q Consensus 7 ~~~~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~r-l---~~~~~~~~~----f~~l~~~~~~~ 78 (519)
++-+++.+|+|.| .|.+|..+++.|.+.| |.++.++.-..-..+-..| + .+++ ..+. -+++++-.|
T Consensus 38 Q~kL~~~~VlIvG-~GGlGs~va~~Lar~G--VG~l~LvD~D~ve~sNLNRQ~~~~~~dv-G~~Kv~v~~~~l~~inP-- 111 (679)
T PRK14851 38 QERLAEAKVAIPG-MGGVGGVHLITMVRTG--IGRFHIADFDQFEPVNVNRQFGARVPSF-GRPKLAVMKEQALSINP-- 111 (679)
T ss_pred HHHHhcCeEEEEC-cCHHHHHHHHHHHHhC--CCeEEEEcCCEecccccccCcCcChhhC-CCHHHHHHHHHHHHhCC--
Confidence 5667889999999 6779999999999987 5777776543322221222 0 0011 1111 123333333
Q ss_pred cccccCCceEEEeccCCCCCCCCChhhhHHHHhcCccEEEEcCc
Q 010075 79 LNSFISEKITFVPGDISSEDLGLKDSNLKEELWNELDIMVNSAA 122 (519)
Q Consensus 79 ~~~~~~~~v~~v~gDl~~~~lgls~~~~~~~l~~~vdiViH~Aa 122 (519)
.-+|+.+...++ +++. ..+++++|+||.+.-
T Consensus 112 -----~~~I~~~~~~i~-------~~n~-~~~l~~~DvVid~~D 142 (679)
T PRK14851 112 -----FLEITPFPAGIN-------ADNM-DAFLDGVDVVLDGLD 142 (679)
T ss_pred -----CCeEEEEecCCC-------hHHH-HHHHhCCCEEEECCC
Confidence 256778888777 4443 467789999997763
|
|
| >TIGR01408 Ube1 ubiquitin-activating enzyme E1 | Back alignment and domain information |
|---|
Probab=89.44 E-value=4 Score=47.97 Aligned_cols=124 Identities=15% Similarity=0.144 Sum_probs=71.3
Q ss_pred hhcCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHH----HHHHh---hhhhHHHHHhhhccccc
Q 010075 8 EFLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRF----QNEVL---AKDVFNVLKEKWGTRLN 80 (519)
Q Consensus 8 ~~~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl----~~~~~---~~~~f~~l~~~~~~~~~ 80 (519)
.-++..+|||.|+ |.+|..+++.|...| |++|++..-..-..+-..|- .+.+- ....-++|++-.|
T Consensus 20 ~kL~~s~VLIiG~-gGLG~EiaKnL~laG--Vg~iti~D~d~v~~sdL~rQf~~~~~dIGk~Kaea~~~~L~eLNp---- 92 (1008)
T TIGR01408 20 QKMAKSNVLISGM-GGLGLEIAKNLVLAG--VKSVTLHDTEKCQAWDLSSNFFLSEDDVGRNRAEAVVKKLAELNP---- 92 (1008)
T ss_pred HHHhhCcEEEECC-CHHHHHHHHHHHHcC--CCeEEEEeCCeecHhhCCCceecchHHcCchHHHHHHHHHHHHCC----
Confidence 4467789999996 559999999999877 57888776433111100000 00000 0112244444443
Q ss_pred cccCCceEEEeccCCCCCCCCChhhhHHHHhcCccEEEEcCccCCccccHHHHHHHhHHHHHHHHHHHHhccCCceEEEE
Q 010075 81 SFISEKITFVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKFDERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHV 160 (519)
Q Consensus 81 ~~~~~~v~~v~gDl~~~~lgls~~~~~~~l~~~vdiViH~Aa~v~f~~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V~v 160 (519)
.-+|+++.++++ ...+.++|+||-+- .+++..+. +-++|++.+....||+.
T Consensus 93 ---~V~V~~~~~~l~------------~e~l~~fdvVV~t~------~~~~~~~~--------in~~cr~~~~~I~fI~~ 143 (1008)
T TIGR01408 93 ---YVHVSSSSVPFN------------EEFLDKFQCVVLTE------MSLPLQKE--------INDFCHSQCPPIAFISA 143 (1008)
T ss_pred ---CceEEEecccCC------------HHHHcCCCEEEECC------CCHHHHHH--------HHHHHHHcCCCeEEEEE
Confidence 245666665554 13567899999863 23344333 44678875323468888
Q ss_pred ecceeec
Q 010075 161 STAYVAG 167 (519)
Q Consensus 161 STa~v~~ 167 (519)
++.+.+|
T Consensus 144 ~~~G~~G 150 (1008)
T TIGR01408 144 DVRGLFG 150 (1008)
T ss_pred eecceEE
Confidence 7766655
|
This model represents the full length, over a thousand amino acids, of a multicopy family of eukaryotic proteins, many of which are designated ubiquitin-activating enzyme E1. Members have two copies of the ThiF family domain (pfam00899), a repeat found in ubiquitin-activating proteins (pfam02134), and other regions. |
| >cd01491 Ube1_repeat1 Ubiquitin activating enzyme (E1), repeat 1 | Back alignment and domain information |
|---|
Probab=89.27 E-value=6.8 Score=39.23 Aligned_cols=124 Identities=16% Similarity=0.171 Sum_probs=72.4
Q ss_pred hhhcCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHH----HHHHh---hhhhHHHHHhhhcccc
Q 010075 7 VEFLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRF----QNEVL---AKDVFNVLKEKWGTRL 79 (519)
Q Consensus 7 ~~~~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl----~~~~~---~~~~f~~l~~~~~~~~ 79 (519)
++-+++.+|||.|+ |.+|..+++.|...| |++|.+..-..-..+-..|- .+++- .....++|++..|
T Consensus 14 q~kL~~s~VLIvG~-gGLG~EiaKnLalaG--Vg~itI~D~d~ve~snL~rqf~~~~~dIGk~Kaea~~~~L~eLNp--- 87 (286)
T cd01491 14 MKKLQKSNVLISGL-GGLGVEIAKNLILAG--VKSVTLHDTKPCSWSDLSSQFYLREEDIGKNRAEASQARLAELNP--- 87 (286)
T ss_pred HHHHhcCcEEEEcC-CHHHHHHHHHHHHcC--CCeEEEEcCCccchhhcccCccCChHHhCHHHHHHHHHHHHHHCC---
Confidence 34567889999995 559999999999877 57787765443211111110 00000 0122345555554
Q ss_pred ccccCCceEEEeccCCCCCCCCChhhhHHHHhcCccEEEEcCccCCccccHHHHHHHhHHHHHHHHHHHHhccCCceEEE
Q 010075 80 NSFISEKITFVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKFDERYDVAFGINTLGVIHLVNFAKKCVKLKVFVH 159 (519)
Q Consensus 80 ~~~~~~~v~~v~gDl~~~~lgls~~~~~~~l~~~vdiViH~Aa~v~f~~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V~ 159 (519)
.-+++++.+++. + ..+.+.|+||.+.. +++.... +-++|++. + ..||+
T Consensus 88 ----~V~V~~~~~~~~-------~-----~~l~~fdvVV~~~~------~~~~~~~--------in~~c~~~-~-ipfI~ 135 (286)
T cd01491 88 ----YVPVTVSTGPLT-------T-----DELLKFQVVVLTDA------SLEDQLK--------INEFCHSP-G-IKFIS 135 (286)
T ss_pred ----CCEEEEEeccCC-------H-----HHHhcCCEEEEecC------CHHHHHH--------HHHHHHHc-C-CEEEE
Confidence 245666666533 1 34568999998753 2333333 33677763 3 57888
Q ss_pred EecceeecC
Q 010075 160 VSTAYVAGE 168 (519)
Q Consensus 160 vSTa~v~~~ 168 (519)
..|...+|.
T Consensus 136 a~~~G~~G~ 144 (286)
T cd01491 136 ADTRGLFGS 144 (286)
T ss_pred EeccccEEE
Confidence 888777764
|
E1, a highly conserved small protein present universally in eukaryotic cells, is part of cascade to attach ubiquitin (Ub) covalently to substrate proteins. This cascade consists of activating (E1), conjugating (E2), and/or ligating (E3) enzymes and then targets them for degradation by the 26S proteasome. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and ubiquitin's C-terminus. E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Ubiquitin-E1 is a single-chain protein with a weakly conserved two-fold repeat. This CD represents the first repeat of Ub-E1. |
| >PRK06223 malate dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=89.23 E-value=4.9 Score=40.54 Aligned_cols=116 Identities=16% Similarity=0.169 Sum_probs=65.9
Q ss_pred CEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEEec
Q 010075 13 KTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVPG 92 (519)
Q Consensus 13 k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v~g 92 (519)
++|.|.|| |.+|..++..+...+. .+|++..+........ .+ ++ .+... . ...... +..
T Consensus 3 ~KI~VIGa-G~vG~~ia~~la~~~~--~ev~L~D~~~~~~~~~-~~--dl-----~~~~~---~------~~~~~~-i~~ 61 (307)
T PRK06223 3 KKISIIGA-GNVGATLAHLLALKEL--GDVVLFDIVEGVPQGK-AL--DI-----AEAAP---V------EGFDTK-ITG 61 (307)
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCC--eEEEEEECCCchhHHH-HH--HH-----Hhhhh---h------cCCCcE-EEe
Confidence 68999998 9999999999887653 2788888754322111 00 01 00000 0 000011 111
Q ss_pred cCCCCCCCCChhhhHHHHhcCccEEEEcCccCC-ccccHHHHHHHhHHHHHHHHHHHHhccCCceEEEEe
Q 010075 93 DISSEDLGLKDSNLKEELWNELDIMVNSAAITK-FDERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVS 161 (519)
Q Consensus 93 Dl~~~~lgls~~~~~~~l~~~vdiViH~Aa~v~-f~~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V~vS 161 (519)
..+. ..+.+.|+||-+++... ...+..+.+..|+.-.+.+++...+...-..++.+|
T Consensus 62 ----------~~d~--~~~~~aDiVii~~~~p~~~~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~viv~t 119 (307)
T PRK06223 62 ----------TNDY--EDIAGSDVVVITAGVPRKPGMSRDDLLGINAKIMKDVAEGIKKYAPDAIVIVVT 119 (307)
T ss_pred ----------CCCH--HHHCCCCEEEECCCCCCCcCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEec
Confidence 1122 22478999999988643 334556667788888888888776642222344443
|
|
| >PRK06901 aspartate-semialdehyde dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=89.00 E-value=0.42 Score=48.25 Aligned_cols=36 Identities=6% Similarity=0.112 Sum_probs=30.6
Q ss_pred CCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEec
Q 010075 12 NKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRA 48 (519)
Q Consensus 12 ~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~ 48 (519)
..+|.| ||||-+|+.+++-|-++...+.+++++.-.
T Consensus 3 ~~~iAi-GATg~VG~~~l~~Leer~fpv~~l~l~~s~ 38 (322)
T PRK06901 3 TLNIAI-AAEFELSEKLLEALEQSDLEIEQISIVEIE 38 (322)
T ss_pred cceEEE-ecCcHHHHHHHHHHHhcCCchhheeecccc
Confidence 457999 999999999999998888778888877654
|
|
| >PRK06129 3-hydroxyacyl-CoA dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=88.84 E-value=1.3 Score=44.80 Aligned_cols=33 Identities=12% Similarity=0.342 Sum_probs=28.8
Q ss_pred CEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecC
Q 010075 13 KTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAA 49 (519)
Q Consensus 13 k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~ 49 (519)
++|.|.| +|++|..++..|++.| .+|++..|++
T Consensus 3 ~~V~VIG-~G~mG~~iA~~la~~G---~~V~v~d~~~ 35 (308)
T PRK06129 3 GSVAIIG-AGLIGRAWAIVFARAG---HEVRLWDADP 35 (308)
T ss_pred cEEEEEC-ccHHHHHHHHHHHHCC---CeeEEEeCCH
Confidence 4799999 8999999999999998 5678888875
|
|
| >TIGR01745 asd_gamma aspartate-semialdehyde dehydrogenase, gamma-proteobacterial | Back alignment and domain information |
|---|
Probab=88.79 E-value=0.53 Score=48.62 Aligned_cols=37 Identities=16% Similarity=0.327 Sum_probs=29.2
Q ss_pred CEEEEeCCccHHHHHHHHHHH-HhCCCccEEEEEEecC
Q 010075 13 KTILVSGVTGFVAKVFIEKIL-RVQPNVKKLYLFVRAA 49 (519)
Q Consensus 13 k~VlITGaTGFlG~~Lv~~LL-~~g~~v~~V~~LvR~~ 49 (519)
++|.|.||||-+|+.+++.|. +....+.+++++.-++
T Consensus 1 ~~VavvGATG~VG~~ll~~L~~e~~fp~~~~~~~ss~~ 38 (366)
T TIGR01745 1 KNVGLVGWRGMVGSVLMQRMQEERDFDAIRPVFFSTSQ 38 (366)
T ss_pred CeEEEEcCcCHHHHHHHHHHHhCCCCccccEEEEEchh
Confidence 478999999999999999998 5555556777776543
|
|
| >cd08294 leukotriene_B4_DH_like 13-PGR is a bifunctional enzyme with delta-13 15-prostaglandin reductase and leukotriene B4 12 hydroxydehydrogenase activity | Back alignment and domain information |
|---|
Probab=88.70 E-value=0.95 Score=45.67 Aligned_cols=37 Identities=16% Similarity=0.110 Sum_probs=30.3
Q ss_pred cCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecC
Q 010075 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAA 49 (519)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~ 49 (519)
-.|.+|+|+||+|-+|..+++.+...| .+|++..++.
T Consensus 142 ~~g~~vlI~ga~g~vG~~aiqlA~~~G---~~vi~~~~s~ 178 (329)
T cd08294 142 KAGETVVVNGAAGAVGSLVGQIAKIKG---CKVIGCAGSD 178 (329)
T ss_pred CCCCEEEEecCccHHHHHHHHHHHHcC---CEEEEEeCCH
Confidence 357899999999999999888777766 4688887764
|
Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto- 13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of ac |
| >cd01487 E1_ThiF_like E1_ThiF_like | Back alignment and domain information |
|---|
Probab=88.60 E-value=7.4 Score=35.83 Aligned_cols=121 Identities=20% Similarity=0.074 Sum_probs=65.6
Q ss_pred EEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHH---HHHHhhh---hhHHHHHhhhccccccccCCce
Q 010075 14 TILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRF---QNEVLAK---DVFNVLKEKWGTRLNSFISEKI 87 (519)
Q Consensus 14 ~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl---~~~~~~~---~~f~~l~~~~~~~~~~~~~~~v 87 (519)
+|+|.| .|.+|..+++.|.+.| |.++++.....-..+-..|- .+++-++ ..-.++++..| .-++
T Consensus 1 ~VlViG-~GglGs~ia~~La~~G--vg~i~lvD~D~v~~sNl~Rq~~~~~~vg~~Ka~~~~~~l~~lnp-------~v~i 70 (174)
T cd01487 1 KVGIAG-AGGLGSNIAVLLARSG--VGNLKLVDFDVVEPSNLNRQQYFLSQIGEPKVEALKENLREINP-------FVKI 70 (174)
T ss_pred CEEEEC-cCHHHHHHHHHHHHcC--CCeEEEEeCCEEcCcchhcccccHhhCCChHHHHHHHHHHHHCC-------CCEE
Confidence 488998 4889999999999976 57788887765221111110 0011000 01122333333 2456
Q ss_pred EEEeccCCCCCCCCChhhhHHHHhcCccEEEEcCccCCccccHHHHHHHhHHHHHHHHHHHHhccCCceEEEEecceeec
Q 010075 88 TFVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKFDERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAYVAG 167 (519)
Q Consensus 88 ~~v~gDl~~~~lgls~~~~~~~l~~~vdiViH~Aa~v~f~~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V~vSTa~v~~ 167 (519)
+.+...++ ... ...+++++|+||.+... . ..-..+.+.|.+..+ ..||+.+..+-++
T Consensus 71 ~~~~~~~~-------~~~-~~~~l~~~DlVi~~~d~------~--------~~r~~i~~~~~~~~~-ip~i~~~~~~~~~ 127 (174)
T cd01487 71 EAINIKID-------ENN-LEGLFGDCDIVVEAFDN------A--------ETKAMLAESLLGNKN-KPVVCASGMAGFG 127 (174)
T ss_pred EEEEeecC-------hhh-HHHHhcCCCEEEECCCC------H--------HHHHHHHHHHHHHCC-CCEEEEehhhccC
Confidence 66766665 333 24677899999998432 1 111234555555323 4577665444444
|
Member of superfamily of activating enzymes (E1) of the ubiquitin-like proteins. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown. |
| >PF02826 2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; InterPro: IPR006140 A number of NAD-dependent 2-hydroxyacid dehydrogenases which seem to be specific for the D-isomer of their substrate have been shown to be functionally and structurally related | Back alignment and domain information |
|---|
Probab=88.45 E-value=3 Score=38.55 Aligned_cols=38 Identities=16% Similarity=0.272 Sum_probs=32.4
Q ss_pred cCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCc
Q 010075 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADI 51 (519)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~ 51 (519)
..|++|.|.| .|-||+.+++.|..-| -+|++..|..+.
T Consensus 34 l~g~tvgIiG-~G~IG~~vA~~l~~fG---~~V~~~d~~~~~ 71 (178)
T PF02826_consen 34 LRGKTVGIIG-YGRIGRAVARRLKAFG---MRVIGYDRSPKP 71 (178)
T ss_dssp STTSEEEEES-TSHHHHHHHHHHHHTT----EEEEEESSCHH
T ss_pred cCCCEEEEEE-EcCCcCeEeeeeecCC---ceeEEecccCCh
Confidence 5789999998 7999999999999877 588999888754
|
All contain a glycine-rich region located in the central section of these enzymes, this region corresponds to the NAD-binding domain. The catalytic domain is described in IPR006139 from INTERPRO ; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0048037 cofactor binding, 0055114 oxidation-reduction process; PDB: 3JTM_A 3NAQ_B 3N7U_J 3KB6_B 3GG9_A 1QP8_B 2CUK_C 2W2L_D 2W2K_A 1WWK_A .... |
| >COG0604 Qor NADPH:quinone reductase and related Zn-dependent oxidoreductases [Energy production and conversion / General function prediction only] | Back alignment and domain information |
|---|
Probab=88.45 E-value=0.93 Score=46.36 Aligned_cols=35 Identities=23% Similarity=0.283 Sum_probs=26.8
Q ss_pred CCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEec
Q 010075 11 ENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRA 48 (519)
Q Consensus 11 ~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~ 48 (519)
.|.+|||+||||.+|...+.-+...|. ++++.+.+
T Consensus 142 ~g~~VLV~gaaGgVG~~aiQlAk~~G~---~~v~~~~s 176 (326)
T COG0604 142 PGETVLVHGAAGGVGSAAIQLAKALGA---TVVAVVSS 176 (326)
T ss_pred CCCEEEEecCCchHHHHHHHHHHHcCC---cEEEEecC
Confidence 379999999999999999887777662 44444444
|
|
| >cd08295 double_bond_reductase_like Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase | Back alignment and domain information |
|---|
Probab=88.31 E-value=1.4 Score=44.95 Aligned_cols=37 Identities=14% Similarity=0.033 Sum_probs=30.3
Q ss_pred cCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecC
Q 010075 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAA 49 (519)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~ 49 (519)
-.|.+|+|+||+|.+|..+++.+...| .+|++.+++.
T Consensus 150 ~~g~~VlI~Ga~G~vG~~aiqlAk~~G---~~Vi~~~~~~ 186 (338)
T cd08295 150 KKGETVFVSAASGAVGQLVGQLAKLKG---CYVVGSAGSD 186 (338)
T ss_pred CCCCEEEEecCccHHHHHHHHHHHHcC---CEEEEEeCCH
Confidence 468899999999999999988777666 4678877764
|
This group includes proteins identified as the Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. The Arabidopsis enzyme, a member of the medium chain dehydrogenase/reductase family, catalyzes the reduction of 7-8-double bond of phenylpropanal substrates as a plant defense mechanism. Prostaglandins and related eicosanoids (lipid mediators involved in host defense and inflamation) are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. Leukotriene B4 (LTB4) can be metabolized by LTB4 20-hydroxylase in |
| >PRK13940 glutamyl-tRNA reductase; Provisional | Back alignment and domain information |
|---|
Probab=88.16 E-value=1.4 Score=46.62 Aligned_cols=37 Identities=22% Similarity=0.504 Sum_probs=32.0
Q ss_pred cCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecC
Q 010075 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAA 49 (519)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~ 49 (519)
+.|++|+|.|+ |-+|+.++..|...|. .+|++..|+.
T Consensus 179 l~~kkvlviGa-G~~a~~va~~L~~~g~--~~I~V~nRt~ 215 (414)
T PRK13940 179 ISSKNVLIIGA-GQTGELLFRHVTALAP--KQIMLANRTI 215 (414)
T ss_pred ccCCEEEEEcC-cHHHHHHHHHHHHcCC--CEEEEECCCH
Confidence 57899999995 9999999999998764 6899999974
|
|
| >PRK04148 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=88.10 E-value=4.9 Score=35.37 Aligned_cols=92 Identities=13% Similarity=0.157 Sum_probs=60.2
Q ss_pred CCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEE
Q 010075 11 ENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFV 90 (519)
Q Consensus 11 ~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v 90 (519)
++++|++.| +| -|..+++.|.+.| ..|.++..+... .+..+ ...+.++
T Consensus 16 ~~~kileIG-~G-fG~~vA~~L~~~G---~~ViaIDi~~~a---V~~a~------------------------~~~~~~v 63 (134)
T PRK04148 16 KNKKIVELG-IG-FYFKVAKKLKESG---FDVIVIDINEKA---VEKAK------------------------KLGLNAF 63 (134)
T ss_pred cCCEEEEEE-ec-CCHHHHHHHHHCC---CEEEEEECCHHH---HHHHH------------------------HhCCeEE
Confidence 347899998 66 7888899999888 567777766432 11111 1357899
Q ss_pred eccCCCCCCCCChhhhHHHHhcCccEEEEcCccCCccccHHHHHHHhHHHHHHHHHHHHhccCCceEE
Q 010075 91 PGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKFDERYDVAFGINTLGVIHLVNFAKKCVKLKVFV 158 (519)
Q Consensus 91 ~gDl~~~~lgls~~~~~~~l~~~vdiViH~Aa~v~f~~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V 158 (519)
.+|+.+|++ .+-++.|.|+-+=.. .+ -...++++|++. +..-+|
T Consensus 64 ~dDlf~p~~---------~~y~~a~liysirpp-------~e-------l~~~~~~la~~~-~~~~~i 107 (134)
T PRK04148 64 VDDLFNPNL---------EIYKNAKLIYSIRPP-------RD-------LQPFILELAKKI-NVPLII 107 (134)
T ss_pred ECcCCCCCH---------HHHhcCCEEEEeCCC-------HH-------HHHHHHHHHHHc-CCCEEE
Confidence 999997642 455788998855221 11 233578899986 555443
|
|
| >PRK14175 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=87.69 E-value=1.8 Score=43.16 Aligned_cols=35 Identities=20% Similarity=0.292 Sum_probs=29.6
Q ss_pred cCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEe
Q 010075 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVR 47 (519)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR 47 (519)
++||+|+|.|+++.+|+.++..|++.+ .+|+++-+
T Consensus 156 l~Gk~vvVIGrs~~VG~pla~lL~~~g---atVtv~~s 190 (286)
T PRK14175 156 LEGKNAVVIGRSHIVGQPVSKLLLQKN---ASVTILHS 190 (286)
T ss_pred CCCCEEEEECCCchhHHHHHHHHHHCC---CeEEEEeC
Confidence 689999999999999999999999887 45555543
|
|
| >cd05292 LDH_2 A subgroup of L-lactate dehydrogenases | Back alignment and domain information |
|---|
Probab=87.69 E-value=10 Score=38.31 Aligned_cols=114 Identities=13% Similarity=0.091 Sum_probs=68.7
Q ss_pred CEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEEec
Q 010075 13 KTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVPG 92 (519)
Q Consensus 13 k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v~g 92 (519)
|+|.|.|+ |.+|..++..|+..+. +.+|.++.+........ .. ++... . .. ........+
T Consensus 1 mkI~IIGa-G~VG~~~a~~l~~~g~-~~ev~l~D~~~~~~~g~--a~-dl~~~---------~-----~~-~~~~~i~~~ 60 (308)
T cd05292 1 MKVAIVGA-GFVGSTTAYALLLRGL-ASEIVLVDINKAKAEGE--AM-DLAHG---------T-----PF-VKPVRIYAG 60 (308)
T ss_pred CEEEEECC-CHHHHHHHHHHHHcCC-CCEEEEEECCchhhhhH--HH-HHHcc---------c-----cc-cCCeEEeeC
Confidence 46899997 9999999999998763 35788888865322111 00 11000 0 00 011111111
Q ss_pred cCCCCCCCCChhhhHHHHhcCccEEEEcCccCC-ccccHHHHHHHhHHHHHHHHHHHHhccCCceEEEEe
Q 010075 93 DISSEDLGLKDSNLKEELWNELDIMVNSAAITK-FDERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVS 161 (519)
Q Consensus 93 Dl~~~~lgls~~~~~~~l~~~vdiViH~Aa~v~-f~~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V~vS 161 (519)
+. ..+.+.|+||-+|+... ...+.......|+.-.+.+.+..++. +.+.++.+-
T Consensus 61 ------------d~--~~l~~aDiViita~~~~~~~~~r~dl~~~n~~i~~~~~~~l~~~-~~~giiiv~ 115 (308)
T cd05292 61 ------------DY--ADCKGADVVVITAGANQKPGETRLDLLKRNVAIFKEIIPQILKY-APDAILLVV 115 (308)
T ss_pred ------------CH--HHhCCCCEEEEccCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH-CCCeEEEEe
Confidence 11 23578999999999753 23456667888999888888887775 333444433
|
L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed predominantly of bacterial LDHs and a few fungal LDHs. Bacterial LDHs may be non-allosteric or may be activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others. |
| >COG0002 ArgC Acetylglutamate semialdehyde dehydrogenase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=87.59 E-value=1.1 Score=45.59 Aligned_cols=36 Identities=17% Similarity=0.361 Sum_probs=28.5
Q ss_pred CCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecC
Q 010075 12 NKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAA 49 (519)
Q Consensus 12 ~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~ 49 (519)
.++|+|.||||+.|..|++.|+. .|++. +++...++
T Consensus 2 ~~kV~IvGasGYtG~EL~rlL~~-Hp~ve-~~~~ss~~ 37 (349)
T COG0002 2 MIKVGIVGASGYTGLELLRLLAG-HPDVE-LILISSRE 37 (349)
T ss_pred CceEEEEcCCCCcHHHHHHHHhc-CCCeE-EEEeechh
Confidence 36899999999999999998887 58886 55554433
|
|
| >smart00859 Semialdhyde_dh Semialdehyde dehydrogenase, NAD binding domain | Back alignment and domain information |
|---|
Probab=87.54 E-value=3.9 Score=35.02 Aligned_cols=30 Identities=17% Similarity=0.492 Sum_probs=23.9
Q ss_pred EEEEeCCccHHHHHHHHHHHHhCCCccEEEEE
Q 010075 14 TILVSGVTGFVAKVFIEKILRVQPNVKKLYLF 45 (519)
Q Consensus 14 ~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~L 45 (519)
+|.|+|++|.+|+.+++.|... +++ +++.+
T Consensus 1 ki~iiG~~g~~g~~~~~~l~~~-~~~-~l~av 30 (122)
T smart00859 1 KVAIVGATGYVGQELLRLLAEH-PDF-EVVAL 30 (122)
T ss_pred CEEEECCCChHHHHHHHHHhcC-CCc-eEEEE
Confidence 4789999999999999988874 443 56666
|
The semialdehyde dehydrogenase family is found in N-acetyl-glutamine semialdehyde dehydrogenase (AgrC), which is involved in arginine biosynthesis, and aspartate-semialdehyde dehydrogenase, an enzyme involved in the biosynthesis of various amino acids from aspartate. This family is also found in yeast and fungal Arg5,6 protein, which is cleaved into the enzymes N-acety-gamma-glutamyl-phosphate reductase and acetylglutamate kinase. These are also involved in arginine biosynthesis. All proteins in this entry contain a NAD binding region of semialdehyde dehydrogenase. |
| >TIGR01915 npdG NADPH-dependent F420 reductase | Back alignment and domain information |
|---|
Probab=87.46 E-value=0.89 Score=43.56 Aligned_cols=34 Identities=24% Similarity=0.198 Sum_probs=29.1
Q ss_pred CEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecC
Q 010075 13 KTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAA 49 (519)
Q Consensus 13 k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~ 49 (519)
|+|.|.||+|.+|..++..|.+.| ++|.+..|+.
T Consensus 1 MkI~IIGG~G~mG~ala~~L~~~G---~~V~v~~r~~ 34 (219)
T TIGR01915 1 MKIAVLGGTGDQGKGLALRLAKAG---NKIIIGSRDL 34 (219)
T ss_pred CEEEEEcCCCHHHHHHHHHHHhCC---CEEEEEEcCH
Confidence 579999999999999999999988 5667777754
|
This model represents a subset of a parent family described by Pfam model pfam03807. Unlike the parent family, members of this family are found only in species with evidence of coenzyme F420. All members of this family are believed to act as NADPH-dependent F420 reductase. |
| >cd08253 zeta_crystallin Zeta-crystallin with NADP-dependent quinone reductase activity (QOR) | Back alignment and domain information |
|---|
Probab=87.43 E-value=1.8 Score=42.95 Aligned_cols=38 Identities=18% Similarity=0.195 Sum_probs=32.1
Q ss_pred hcCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecC
Q 010075 9 FLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAA 49 (519)
Q Consensus 9 ~~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~ 49 (519)
.-.|++|+|+||+|.+|..+++.+...| .+|+++.+++
T Consensus 142 ~~~g~~vlI~g~~~~~g~~~~~~a~~~g---~~v~~~~~~~ 179 (325)
T cd08253 142 AKAGETVLVHGGSGAVGHAAVQLARWAG---ARVIATASSA 179 (325)
T ss_pred CCCCCEEEEEcCCchHHHHHHHHHHHcC---CEEEEEeCCH
Confidence 3468999999999999999999888877 5788888764
|
Zeta-crystallin is a eye lens protein with NADP-dependent quinone reductase activity (QOR). It has been cited as a structural component in mammalian eyes, but also has homology to quinone reductases in unrelated species. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts |
| >KOG1494 consensus NAD-dependent malate dehydrogenase [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=87.24 E-value=6 Score=39.08 Aligned_cols=117 Identities=23% Similarity=0.263 Sum_probs=73.6
Q ss_pred CCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEE
Q 010075 11 ENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFV 90 (519)
Q Consensus 11 ~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v 90 (519)
.+-+|.|.||.|.||+-|-- ||+.+|.|....+..-.. ..-|
T Consensus 27 ~~~KVAvlGAaGGIGQPLSL-LlK~np~Vs~LaLYDi~~-------------------------------------~~GV 68 (345)
T KOG1494|consen 27 RGLKVAVLGAAGGIGQPLSL-LLKLNPLVSELALYDIAN-------------------------------------TPGV 68 (345)
T ss_pred CcceEEEEecCCccCccHHH-HHhcCcccceeeeeeccc-------------------------------------CCcc
Confidence 34689999999999998764 556678776544332211 1112
Q ss_pred eccCCC-----CCCCCChhhhHHHHhcCccEEEEcCccCCc-cccHHHHHHHhHHHHHHHHHHHHhccCCceEEEEecce
Q 010075 91 PGDISS-----EDLGLKDSNLKEELWNELDIMVNSAAITKF-DERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAY 164 (519)
Q Consensus 91 ~gDl~~-----~~lgls~~~~~~~l~~~vdiViH~Aa~v~f-~~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V~vSTa~ 164 (519)
..|++. .-.|...++.++..+++.|+|+-=||..+- .-.-++.+.+|..-.+.|..++.++ -.+.+|.+=|-=
T Consensus 69 aaDlSHI~T~s~V~g~~g~~~L~~al~~advVvIPAGVPRKPGMTRDDLFn~NAgIv~~l~~aia~~-cP~A~i~vIsNP 147 (345)
T KOG1494|consen 69 AADLSHINTNSSVVGFTGADGLENALKGADVVVIPAGVPRKPGMTRDDLFNINAGIVKTLAAAIAKC-CPNALILVISNP 147 (345)
T ss_pred cccccccCCCCceeccCChhHHHHHhcCCCEEEecCCCCCCCCCcHHHhhhcchHHHHHHHHHHHhh-CccceeEeecCc
Confidence 222221 111222344456778899999999998753 3456778999999999999988775 334445544433
Q ss_pred ee
Q 010075 165 VA 166 (519)
Q Consensus 165 v~ 166 (519)
|+
T Consensus 148 VN 149 (345)
T KOG1494|consen 148 VN 149 (345)
T ss_pred cc
Confidence 33
|
|
| >TIGR01381 E1_like_apg7 E1-like protein-activating enzyme Gsa7p/Apg7p | Back alignment and domain information |
|---|
Probab=87.16 E-value=4.5 Score=44.78 Aligned_cols=39 Identities=13% Similarity=0.174 Sum_probs=32.0
Q ss_pred hhcCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecC
Q 010075 8 EFLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAA 49 (519)
Q Consensus 8 ~~~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~ 49 (519)
+-+++.+|||.| .|.+|..+++.|++.| |++|+++....
T Consensus 334 ekL~~~kVLIvG-aGGLGs~VA~~La~~G--Vg~ItlVD~D~ 372 (664)
T TIGR01381 334 ERYSQLKVLLLG-AGTLGCNVARCLIGWG--VRHITFVDNGK 372 (664)
T ss_pred HHHhcCeEEEEC-CcHHHHHHHHHHHHcC--CCeEEEEcCCE
Confidence 456789999998 4779999999999976 68888876544
|
This model represents a family of eukaryotic proteins found in animals, plants, and yeasts, including Apg7p (YHR171W) from Saccharomyces cerevisiae and GSA7 from Pichia pastoris. Members are about 650 to 700 residues in length and include a central domain of about 150 residues shared with the ThiF/MoeB/HesA family of proteins. A low level of similarity to ubiquitin-activating enzyme E1 is described in a paper on peroxisome autophagy mediated by GSA7, and is the basis of the name ubiquitin activating enzyme E1-like protein. Members of the family appear to be involved in protein lipidation events analogous to ubiquitination and required for membrane fusion events during autophagy. |
| >cd08250 Mgc45594_like Mgc45594 gene product and other MDR family members | Back alignment and domain information |
|---|
Probab=87.01 E-value=3.6 Score=41.48 Aligned_cols=38 Identities=11% Similarity=0.071 Sum_probs=31.0
Q ss_pred hcCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecC
Q 010075 9 FLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAA 49 (519)
Q Consensus 9 ~~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~ 49 (519)
.-+|.+|+|.||+|-+|..+++.....| .+|++..++.
T Consensus 137 ~~~~~~vlI~ga~g~ig~~~~~~a~~~g---~~v~~~~~~~ 174 (329)
T cd08250 137 MKSGETVLVTAAAGGTGQFAVQLAKLAG---CHVIGTCSSD 174 (329)
T ss_pred CCCCCEEEEEeCccHHHHHHHHHHHHcC---CeEEEEeCcH
Confidence 3468899999999999999888777766 4678887764
|
Includes Human Mgc45594 gene product of undetermined function. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. |
| >TIGR02853 spore_dpaA dipicolinic acid synthetase, A subunit | Back alignment and domain information |
|---|
Probab=86.97 E-value=1.4 Score=44.20 Aligned_cols=36 Identities=11% Similarity=0.309 Sum_probs=30.9
Q ss_pred cCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecC
Q 010075 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAA 49 (519)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~ 49 (519)
+.|++|+|.|+ |.+|+.+++.|...| .+|++..|+.
T Consensus 149 l~gk~v~IiG~-G~iG~avA~~L~~~G---~~V~v~~R~~ 184 (287)
T TIGR02853 149 IHGSNVMVLGF-GRTGMTIARTFSALG---ARVFVGARSS 184 (287)
T ss_pred CCCCEEEEEcC-hHHHHHHHHHHHHCC---CEEEEEeCCH
Confidence 56899999995 889999999999877 4788888864
|
This predicted Rossman fold-containing protein is the A subunit of dipicolinic acid synthetase as found in most, though not all, endospore-forming low-GC Gram-positive bacteria; it is absent in Clostridium. The B subunit is represented by TIGR02852. This protein is also known as SpoVFA. |
| >PRK14852 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=86.86 E-value=6.4 Score=45.74 Aligned_cols=129 Identities=12% Similarity=0.058 Sum_probs=74.4
Q ss_pred hhhcCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHH-H---HHHHhhhh---hHHHHHhhhcccc
Q 010075 7 VEFLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALR-F---QNEVLAKD---VFNVLKEKWGTRL 79 (519)
Q Consensus 7 ~~~~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~r-l---~~~~~~~~---~f~~l~~~~~~~~ 79 (519)
++-+++.+|+|.| .|.+|..+++.|.+.| |+++.++.-..-..+-..| + .+.+-.+. .-+++++-.|
T Consensus 327 Q~kL~~srVlVvG-lGGlGs~ia~~LAraG--VG~I~L~D~D~Ve~SNLNRQ~l~~~~dIG~~Kaevaa~~l~~INP--- 400 (989)
T PRK14852 327 QRRLLRSRVAIAG-LGGVGGIHLMTLARTG--IGNFNLADFDAYSPVNLNRQYGASIASFGRGKLDVMTERALSVNP--- 400 (989)
T ss_pred HHHHhcCcEEEEC-CcHHHHHHHHHHHHcC--CCeEEEEcCCEecccccccccCCChhhCCChHHHHHHHHHHHHCC---
Confidence 4567889999999 5679999999999987 5788776554332222222 0 00110000 1123333333
Q ss_pred ccccCCceEEEeccCCCCCCCCChhhhHHHHhcCccEEEEcCccCCccccHHHHHHHhHHHHHHHHHHHHhccCCceEEE
Q 010075 80 NSFISEKITFVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKFDERYDVAFGINTLGVIHLVNFAKKCVKLKVFVH 159 (519)
Q Consensus 80 ~~~~~~~v~~v~gDl~~~~lgls~~~~~~~l~~~vdiViH~Aa~v~f~~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V~ 159 (519)
.-+|+.+...++ ++.. ..+++++|+||.+.-...+ ...+.+.+.|.+. + ..+|+
T Consensus 401 ----~v~I~~~~~~I~-------~en~-~~fl~~~DiVVDa~D~~~~------------~~rr~l~~~c~~~-~-IP~I~ 454 (989)
T PRK14852 401 ----FLDIRSFPEGVA-------AETI-DAFLKDVDLLVDGIDFFAL------------DIRRRLFNRALEL-G-IPVIT 454 (989)
T ss_pred ----CCeEEEEecCCC-------HHHH-HHHhhCCCEEEECCCCccH------------HHHHHHHHHHHHc-C-CCEEE
Confidence 246777777776 4333 4677899999977533211 1123455566653 3 45777
Q ss_pred Eecceeec
Q 010075 160 VSTAYVAG 167 (519)
Q Consensus 160 vSTa~v~~ 167 (519)
.++....|
T Consensus 455 ag~~G~~g 462 (989)
T PRK14852 455 AGPLGYSC 462 (989)
T ss_pred eeccccCe
Confidence 77644443
|
|
| >cd01493 APPBP1_RUB Ubiquitin activating enzyme (E1) subunit APPBP1 | Back alignment and domain information |
|---|
Probab=86.62 E-value=6 Score=41.98 Aligned_cols=130 Identities=7% Similarity=0.048 Sum_probs=72.0
Q ss_pred hhhcCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHH---H-HHHhh---hhhHHHHHhhhcccc
Q 010075 7 VEFLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRF---Q-NEVLA---KDVFNVLKEKWGTRL 79 (519)
Q Consensus 7 ~~~~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl---~-~~~~~---~~~f~~l~~~~~~~~ 79 (519)
++-+...+|+|.|++| +|..+++-|...| |++++++.-..-..+-..+- . +.+-+ ..+-+.|.+-.|.
T Consensus 15 Q~~L~~s~VlliG~gg-lGsEilKNLvL~G--Ig~~tIvD~~~V~~sDL~~nFfl~~~diGk~kA~~~~~~L~eLNp~-- 89 (425)
T cd01493 15 QAALESAHVCLLNATA-TGTEILKNLVLPG--IGSFTIVDGSKVDEEDLGNNFFLDASSLGKSRAEATCELLQELNPD-- 89 (425)
T ss_pred HHHHhhCeEEEEcCcH-HHHHHHHHHHHcC--CCeEEEECCCcCchhhccccccCChhhcCcHHHHHHHHHHHHHCCC--
Confidence 3456678999999766 9999999999865 68888876543211110000 0 00000 0112334444431
Q ss_pred ccccCCceEEEeccCCCCCCCCChhhhHHHHhcCccEEEEcCccCCccccHHHHHHHhHHHHHHHHHHHHhccCCceEEE
Q 010075 80 NSFISEKITFVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKFDERYDVAFGINTLGVIHLVNFAKKCVKLKVFVH 159 (519)
Q Consensus 80 ~~~~~~~v~~v~gDl~~~~lgls~~~~~~~l~~~vdiViH~Aa~v~f~~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V~ 159 (519)
-+++++..++.+. .+.....+.+.|+||-+-. +... ...+.++|.+. + ..+|+
T Consensus 90 -----V~i~~~~e~~~~l------l~~~~~f~~~fdiVI~t~~------~~~~--------~~~L~~~c~~~-~-iPlI~ 142 (425)
T cd01493 90 -----VNGSAVEESPEAL------LDNDPSFFSQFTVVIATNL------PEST--------LLRLADVLWSA-N-IPLLY 142 (425)
T ss_pred -----CEEEEEecccchh------hhhHHHHhcCCCEEEECCC------CHHH--------HHHHHHHHHHc-C-CCEEE
Confidence 3455666555421 1111256678999984321 1111 22355677764 3 46999
Q ss_pred EecceeecC
Q 010075 160 VSTAYVAGE 168 (519)
Q Consensus 160 vSTa~v~~~ 168 (519)
++|.+.+|.
T Consensus 143 ~~s~G~~G~ 151 (425)
T cd01493 143 VRSYGLYGY 151 (425)
T ss_pred EecccCEEE
Confidence 999888875
|
APPBP1 is part of the heterodimeric activating enzyme (E1), specific for the Rub family of ubiquitin-like proteins (Ubls). E1 enzymes are part of a conjugation cascade to attach Ub or Ubls, covalently to substrate proteins consisting of activating (E1), conjugating (E2), and/or ligating (E3) enzymes. E1 activates ubiquitin(-like) by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and Ubls C-terminus. E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Post-translational modification by Rub family of ubiquitin-like proteins (Ublps) activates SCF ubiquitin ligases and is involved in cell cycle control, signaling and embryogenesis. ABPP1 contains part of the adenylation domain. |
| >cd05188 MDR Medium chain reductase/dehydrogenase (MDR)/zinc-dependent alcohol dehydrogenase-like family | Back alignment and domain information |
|---|
Probab=86.45 E-value=4.3 Score=39.18 Aligned_cols=36 Identities=19% Similarity=0.212 Sum_probs=29.9
Q ss_pred cCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecC
Q 010075 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAA 49 (519)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~ 49 (519)
-.|.+|+|+|++| +|..+++.+...| .+|+++.++.
T Consensus 133 ~~~~~vli~g~~~-~G~~~~~~a~~~g---~~v~~~~~~~ 168 (271)
T cd05188 133 KPGDTVLVLGAGG-VGLLAAQLAKAAG---ARVIVTDRSD 168 (271)
T ss_pred CCCCEEEEECCCH-HHHHHHHHHHHcC---CeEEEEcCCH
Confidence 4578999999999 9999998887777 6788887764
|
The medium chain reductase/dehydrogenases (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH) , quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydro |
| >cd08266 Zn_ADH_like1 Alcohol dehydrogenases of the MDR family | Back alignment and domain information |
|---|
Probab=86.40 E-value=5.7 Score=39.81 Aligned_cols=38 Identities=16% Similarity=0.103 Sum_probs=31.7
Q ss_pred hcCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecC
Q 010075 9 FLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAA 49 (519)
Q Consensus 9 ~~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~ 49 (519)
...+.+|+|+|++|-+|..+++.+...| .+|++..++.
T Consensus 164 ~~~~~~vlI~g~~~~iG~~~~~~~~~~g---~~v~~~~~~~ 201 (342)
T cd08266 164 LRPGETVLVHGAGSGVGSAAIQIAKLFG---ATVIATAGSE 201 (342)
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHHcC---CEEEEEeCCH
Confidence 3467899999999999999999988887 5677777664
|
This group contains proteins related to the zinc-dependent alcohol dehydrogenases. However, while the group has structural zinc site characteristic of these enzymes, it lacks the consensus site for a catalytic zinc. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone |
| >cd08293 PTGR2 Prostaglandin reductase | Back alignment and domain information |
|---|
Probab=86.18 E-value=1.6 Score=44.45 Aligned_cols=35 Identities=14% Similarity=0.092 Sum_probs=28.1
Q ss_pred CEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecC
Q 010075 13 KTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAA 49 (519)
Q Consensus 13 k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~ 49 (519)
.+|+|+||+|.+|..++......|. .+|++.+++.
T Consensus 156 ~~VlI~ga~g~vG~~aiqlAk~~G~--~~Vi~~~~s~ 190 (345)
T cd08293 156 QTMVVSGAAGACGSLAGQIGRLLGC--SRVVGICGSD 190 (345)
T ss_pred CEEEEECCCcHHHHHHHHHHHHcCC--CEEEEEcCCH
Confidence 8999999999999998876666562 3688887764
|
Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acid |
| >TIGR02825 B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15-oxo-prostaglandin 13-reductase | Back alignment and domain information |
|---|
Probab=86.14 E-value=1.7 Score=44.05 Aligned_cols=37 Identities=16% Similarity=0.056 Sum_probs=29.8
Q ss_pred cCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecC
Q 010075 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAA 49 (519)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~ 49 (519)
-.|.+|+|+||+|.+|..++..+...| .+|++.+++.
T Consensus 137 ~~g~~VLI~ga~g~vG~~aiqlAk~~G---~~Vi~~~~s~ 173 (325)
T TIGR02825 137 KGGETVMVNAAAGAVGSVVGQIAKLKG---CKVVGAAGSD 173 (325)
T ss_pred CCCCEEEEeCCccHHHHHHHHHHHHcC---CEEEEEeCCH
Confidence 357899999999999999887666666 4688887764
|
Leukotriene B4 12-hydroxydehydrogenase is an NADP-dependent enzyme of arachidonic acid metabolism, responsible for converting leukotriene B4 to the much less active metabolite 12-oxo-leukotriene B4. The BRENDA database lists leukotriene B4 12-hydroxydehydrogenase as one of the synonyms of 2-alkenal reductase (EC 1.3.1.74), while 1.3.1.48 is 15-oxoprostaglandin 13-reductase. |
| >KOG1178 consensus Non-ribosomal peptide synthetase/alpha-aminoadipate reductase and related enzymes [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=85.94 E-value=0.27 Score=56.93 Aligned_cols=134 Identities=20% Similarity=0.333 Sum_probs=96.8
Q ss_pred EEEeCCccHHHHHHHHHHHHhCCC--ccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEEec
Q 010075 15 ILVSGVTGFVAKVFIEKILRVQPN--VKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVPG 92 (519)
Q Consensus 15 VlITGaTGFlG~~Lv~~LL~~g~~--v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v~g 92 (519)
+++||.+|++|+...+.+.....- .-.+.+++|..+......|.+..+ ..+..+.++ ..-++..+.+
T Consensus 721 ~~~~~~~~~l~~~~l~~~~~~~~~~~~i~~~~~~~a~~e~a~~~~~~~~i---~~~~~~~e~--------~~i~~~~~~~ 789 (1032)
T KOG1178|consen 721 VFLTGYTGYLGRRKLSNLVKLSNFFYIILVFALVRASSEEASGGRLQDAI---QIYGVLNEE--------LLINIIVHLI 789 (1032)
T ss_pred eeeeeccceehhhhhhhhhhhhhhhheeeeEEEeccCCchhhccchhchh---hhhhhcccc--------ccceeeeehh
Confidence 899999999999999888776531 234677788776665555544221 112222222 2357788899
Q ss_pred cCCCCCCCCChhhhHHHHhcCccEEEEcCccCCccccHHHHHHHhHHHHHHHHHHHHhccCCceEEEEec
Q 010075 93 DISSEDLGLKDSNLKEELWNELDIMVNSAAITKFDERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVST 162 (519)
Q Consensus 93 Dl~~~~lgls~~~~~~~l~~~vdiViH~Aa~v~f~~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V~vST 162 (519)
++....+|+.+.-+ ..+.+.++.++|+++.++..-+.......|+.++...+.+....+ +.+..+|+
T Consensus 790 ~~~~~~~~~~~~l~-~~l~~~~~~~i~~~~~~~~v~~~t~~~~~~~~~~~~~~~l~~~l~--~~~~~~s~ 856 (1032)
T KOG1178|consen 790 DLSKSLFGLEDTLW-NKLQEPVSIVIHNGALVHEVLRYTELRYPNVIGTITVLPLYSFLK--KKPKDISL 856 (1032)
T ss_pred hhhhhhhcccchhh-hccccCcceecccccceeeechhhccCCceeeeeeeeeeeecccc--ccceeEEe
Confidence 99999999977776 478889999999999998888888888889999999888887643 33444443
|
|
| >PRK06849 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=85.85 E-value=3.4 Score=43.21 Aligned_cols=36 Identities=17% Similarity=0.156 Sum_probs=31.3
Q ss_pred CCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecC
Q 010075 11 ENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAA 49 (519)
Q Consensus 11 ~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~ 49 (519)
+.|+|||||+...+|-.+++.|-+.| .+|+++...+
T Consensus 3 ~~~~VLI~G~~~~~~l~iar~l~~~G---~~Vi~~d~~~ 38 (389)
T PRK06849 3 TKKTVLITGARAPAALELARLFHNAG---HTVILADSLK 38 (389)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCC---CEEEEEeCCc
Confidence 46899999999999999999999988 6778876654
|
|
| >TIGR03693 ocin_ThiF_like putative thiazole-containing bacteriocin maturation protein | Back alignment and domain information |
|---|
Probab=85.61 E-value=6.2 Score=43.37 Aligned_cols=89 Identities=18% Similarity=0.266 Sum_probs=55.6
Q ss_pred hcCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceE
Q 010075 9 FLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKIT 88 (519)
Q Consensus 9 ~~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~ 88 (519)
.|+..+|+|.| +|.+|..++..|++.|. .+|.+++-..- .+...|+. ++. ...++. ...+.
T Consensus 126 ~qR~akVlVlG-~Gg~~s~lv~sL~~sG~--~~I~~vd~D~v-~SNlnRIg-El~------e~A~~~--------n~~v~ 186 (637)
T TIGR03693 126 LSRNAKILAAG-SGDFLTKLVRSLIDSGF--PRFHAIVTDAE-EHALDRIH-ELA------EIAEET--------DDALL 186 (637)
T ss_pred hhhcccEEEEe-cCchHHHHHHHHHhcCC--CcEEEEecccc-chhhhHHH-HHH------HHHHHh--------CCCCc
Confidence 35788999998 67789999999999885 67777654443 33344433 111 111111 13344
Q ss_pred EEeccCCCCCCCCChhhhHHHHhcCccEEEEcCcc
Q 010075 89 FVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAI 123 (519)
Q Consensus 89 ~v~gDl~~~~lgls~~~~~~~l~~~vdiViH~Aa~ 123 (519)
+-..|.+. ..+.. ..++..|+|++.+-.
T Consensus 187 v~~i~~~~------~~dl~-ev~~~~DiVi~vsDd 214 (637)
T TIGR03693 187 VQEIDFAE------DQHLH-EAFEPADWVLYVSDN 214 (637)
T ss_pred eEeccCCc------chhHH-HhhcCCcEEEEECCC
Confidence 44444432 45554 788999999999754
|
Members of this protein family are found in a three-gene operon in Bacillus anthracis and related Bacillus species, where the other two genes are clearly identified with maturation of a putative thiazole-containing bacteriocin precursor. While there is no detectable pairwise sequence similarity between members of this family and the proposed cyclodehydratases such as SagC of Streptococcus pyogenes (see family TIGR03603), both families show similarity through PSI-BLAST to ThiF, a protein involved in biosynthesis of the thiazole moiety for thiamine biosynthesis. This family, therefore, may contribute to cyclodehydratase function in heterocycle-containing bacteriocin biosyntheses. In Bacillus licheniformis ATCC 14580, the bacteriocin precursor gene is adjacent to the gene for this protein. |
| >COG0289 DapB Dihydrodipicolinate reductase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=85.54 E-value=7.8 Score=38.03 Aligned_cols=38 Identities=21% Similarity=0.452 Sum_probs=31.0
Q ss_pred CCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCC
Q 010075 12 NKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAAD 50 (519)
Q Consensus 12 ~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~ 50 (519)
.++|.|.||+|=+|+.+++.+.+. +++.=+-++.|+++
T Consensus 2 ~iki~V~Ga~GRMG~~ii~~v~~~-~~~~L~aa~~~~~~ 39 (266)
T COG0289 2 MIKVAVAGASGRMGRTLIRAVLEA-PDLELVAAFDRPGS 39 (266)
T ss_pred CceEEEEcCCChHHHHHHHHHhcC-CCceEEEEEecCCc
Confidence 468999999999999999999885 56666667777764
|
|
| >PRK06598 aspartate-semialdehyde dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=85.26 E-value=1.3 Score=45.95 Aligned_cols=36 Identities=17% Similarity=0.350 Sum_probs=26.5
Q ss_pred CEEEEeCCccHHHHHHHHHHHHhC-CCccEEEEEEec
Q 010075 13 KTILVSGVTGFVAKVFIEKILRVQ-PNVKKLYLFVRA 48 (519)
Q Consensus 13 k~VlITGaTGFlG~~Lv~~LL~~g-~~v~~V~~LvR~ 48 (519)
++|.|.||||++|..|++.||++- -.+.++..+..+
T Consensus 2 ~~VAIVGATG~vG~ell~llL~~~~f~~~~l~~~ss~ 38 (369)
T PRK06598 2 KKVGFVGWRGMVGSVLMQRMVEENDFDLIEPVFFSTS 38 (369)
T ss_pred eEEEEEeCCCHHHHHHHHHHHhCCCCCcCcEEEecch
Confidence 479999999999999999777742 223456665544
|
|
| >TIGR00978 asd_EA aspartate-semialdehyde dehydrogenase (non-peptidoglycan organisms) | Back alignment and domain information |
|---|
Probab=85.24 E-value=1.2 Score=45.86 Aligned_cols=34 Identities=26% Similarity=0.450 Sum_probs=26.1
Q ss_pred CEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEec
Q 010075 13 KTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRA 48 (519)
Q Consensus 13 k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~ 48 (519)
++|.|+||||++|+.|++.|+++ +++ +|..+.++
T Consensus 1 ~kVaIvGatG~~G~~L~~~l~~~-~~~-~l~~v~~~ 34 (341)
T TIGR00978 1 MRVAVLGATGLVGQKFVKLLAKH-PYF-ELAKVVAS 34 (341)
T ss_pred CEEEEECCCCHHHHHHHHHHHhC-CCc-eEEEEEEC
Confidence 47999999999999999977764 554 55566443
|
Two closely related families of aspartate-semialdehyde dehydrogenase are found. They differ by a deep split in phylogenetic and percent identity trees and in gap patterns. Separate models are built for the two types in order to exclude the USG-1 protein, found in several species, which is specifically related to the Bacillus subtilis type of aspartate-semialdehyde dehydrogenase. Members of this type are found primarily in organisms that lack peptidoglycan. |
| >PRK13243 glyoxylate reductase; Reviewed | Back alignment and domain information |
|---|
Probab=85.17 E-value=2.7 Score=43.10 Aligned_cols=36 Identities=17% Similarity=0.276 Sum_probs=30.3
Q ss_pred cCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecC
Q 010075 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAA 49 (519)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~ 49 (519)
+.||+|.|.| .|-||+.+++.|..-| .+|++..|..
T Consensus 148 L~gktvgIiG-~G~IG~~vA~~l~~~G---~~V~~~d~~~ 183 (333)
T PRK13243 148 VYGKTIGIIG-FGRIGQAVARRAKGFG---MRILYYSRTR 183 (333)
T ss_pred CCCCEEEEEC-cCHHHHHHHHHHHHCC---CEEEEECCCC
Confidence 5789999998 6999999999998877 4677777754
|
|
| >TIGR01763 MalateDH_bact malate dehydrogenase, NAD-dependent | Back alignment and domain information |
|---|
Probab=84.95 E-value=12 Score=37.95 Aligned_cols=106 Identities=16% Similarity=0.181 Sum_probs=63.1
Q ss_pred CEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEEec
Q 010075 13 KTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVPG 92 (519)
Q Consensus 13 k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v~g 92 (519)
++|.|.|+ |.+|..++..|+..+. .+|+++.+........ .+ ++ ++.. + .... .+
T Consensus 2 ~KV~VIGa-G~vG~~iA~~la~~g~--~~VvlvDi~~~l~~g~-a~--d~-----~~~~----~-------~~~~---~~ 56 (305)
T TIGR01763 2 KKISVIGA-GFVGATTAFRLAEKEL--ADLVLLDVVEGIPQGK-AL--DM-----YEAS----P-------VGGF---DT 56 (305)
T ss_pred CEEEEECc-CHHHHHHHHHHHHcCC--CeEEEEeCCCChhHHH-HH--hh-----hhhh----h-------ccCC---Cc
Confidence 57899995 9999999999988764 2577777743321111 00 01 1100 0 0000 01
Q ss_pred cCCCCCCCCChhhhHHHHhcCccEEEEcCccCCc-cccHHHHHHHhHHHHHHHHHHHHhc
Q 010075 93 DISSEDLGLKDSNLKEELWNELDIMVNSAAITKF-DERYDVAFGINTLGVIHLVNFAKKC 151 (519)
Q Consensus 93 Dl~~~~lgls~~~~~~~l~~~vdiViH~Aa~v~f-~~~~~~~~~~Nv~gt~~ll~~a~~~ 151 (519)
.+.- ..+. +. +.+.|+||=+|+...- +++-...+..|+.-.+.+.+...+.
T Consensus 57 ~i~~------t~d~-~~-~~~aDiVIitag~p~~~~~sR~~l~~~N~~iv~~i~~~I~~~ 108 (305)
T TIGR01763 57 KVTG------TNNY-AD-TANSDIVVITAGLPRKPGMSREDLLSMNAGIVREVTGRIMEH 108 (305)
T ss_pred EEEe------cCCH-HH-hCCCCEEEEcCCCCCCcCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 1110 1122 13 4689999999997543 3455567888999999988877765
|
The annotation of Botryococcus braunii as lactate dehydrogenase appears top be in error. This was initially annotated as MDH by Swiss-Prot and then changed. The rationale for either of these annotations is not traceable. |
| >PRK15469 ghrA bifunctional glyoxylate/hydroxypyruvate reductase A; Provisional | Back alignment and domain information |
|---|
Probab=84.38 E-value=4.4 Score=41.16 Aligned_cols=36 Identities=19% Similarity=0.197 Sum_probs=30.0
Q ss_pred cCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecC
Q 010075 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAA 49 (519)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~ 49 (519)
..|++|.|.| .|-||+.+++.|..-| .+|++..|..
T Consensus 134 l~g~tvgIvG-~G~IG~~vA~~l~afG---~~V~~~~~~~ 169 (312)
T PRK15469 134 REDFTIGILG-AGVLGSKVAQSLQTWG---FPLRCWSRSR 169 (312)
T ss_pred cCCCEEEEEC-CCHHHHHHHHHHHHCC---CEEEEEeCCC
Confidence 5789999998 8999999999999877 5677776654
|
|
| >PRK06718 precorrin-2 dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=84.14 E-value=5.8 Score=37.52 Aligned_cols=34 Identities=24% Similarity=0.304 Sum_probs=29.0
Q ss_pred cCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEe
Q 010075 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVR 47 (519)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR 47 (519)
++|++|+|.|| |-+|...++.|++.| .+|+++.+
T Consensus 8 l~~k~vLVIGg-G~va~~ka~~Ll~~g---a~V~VIs~ 41 (202)
T PRK06718 8 LSNKRVVIVGG-GKVAGRRAITLLKYG---AHIVVISP 41 (202)
T ss_pred cCCCEEEEECC-CHHHHHHHHHHHHCC---CeEEEEcC
Confidence 57999999996 999999999999988 56676654
|
|
| >cd05276 p53_inducible_oxidoreductase PIG3 p53-inducible quinone oxidoreductase | Back alignment and domain information |
|---|
Probab=84.08 E-value=2.9 Score=41.44 Aligned_cols=38 Identities=13% Similarity=0.142 Sum_probs=31.6
Q ss_pred hcCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecC
Q 010075 9 FLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAA 49 (519)
Q Consensus 9 ~~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~ 49 (519)
.-.+.+|+|+|++|-+|..+++.+...| .+|++..++.
T Consensus 137 ~~~~~~vlv~g~~~~ig~~~~~~~~~~g---~~v~~~~~~~ 174 (323)
T cd05276 137 LKAGETVLIHGGASGVGTAAIQLAKALG---ARVIATAGSE 174 (323)
T ss_pred CCCCCEEEEEcCcChHHHHHHHHHHHcC---CEEEEEcCCH
Confidence 3467899999999999999999988877 5678877753
|
PIG3 p53-inducible quinone oxidoreductase, a medium chain dehydrogenase/reductase family member, acts in the apoptotic pathway. PIG3 reduces ortho-quinones, but its apoptotic activity has been attributed to oxidative stress generation, since overexpression of PIG3 accumulates reactive oxygen species. PIG3 resembles the MDR family member quinone reductases, which catalyze the reduction of quinone to hydroxyquinone. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding |
| >PTZ00082 L-lactate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=83.96 E-value=12 Score=38.11 Aligned_cols=117 Identities=15% Similarity=0.164 Sum_probs=69.0
Q ss_pred CCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEE
Q 010075 11 ENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFV 90 (519)
Q Consensus 11 ~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v 90 (519)
+.++|.|.| +|.+|..++..++..+. ..|+++.+.+.... .+.+. +.. .. ........+.
T Consensus 5 ~~~KI~IIG-aG~vG~~ia~~la~~gl--~~i~LvDi~~~~~~-~~~ld--~~~--------~~------~~~~~~~~I~ 64 (321)
T PTZ00082 5 KRRKISLIG-SGNIGGVMAYLIVLKNL--GDVVLFDIVKNIPQ-GKALD--ISH--------SN------VIAGSNSKVI 64 (321)
T ss_pred CCCEEEEEC-CCHHHHHHHHHHHhCCC--CeEEEEeCCCchhh-HHHHH--HHh--------hh------hccCCCeEEE
Confidence 457899999 59999999998877653 45788877654321 12221 100 00 0000111222
Q ss_pred eccCCCCCCCCChhhhHHHHhcCccEEEEcCccCCc-cc-----cHHHHHHHhHHHHHHHHHHHHhccCCc-eEEEEe
Q 010075 91 PGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF-DE-----RYDVAFGINTLGVIHLVNFAKKCVKLK-VFVHVS 161 (519)
Q Consensus 91 ~gDl~~~~lgls~~~~~~~l~~~vdiViH~Aa~v~f-~~-----~~~~~~~~Nv~gt~~ll~~a~~~~~l~-~~V~vS 161 (519)
. . .+. +.+.+.|+||.+|+..+- .. +....+..|+.-.+.+.+...+. ..+ .++.+|
T Consensus 65 ~-~----------~d~--~~l~~aDiVI~tag~~~~~~~~~~~~~r~~~l~~n~~i~~~i~~~i~~~-~p~a~~iv~s 128 (321)
T PTZ00082 65 G-T----------NNY--EDIAGSDVVIVTAGLTKRPGKSDKEWNRDDLLPLNAKIMDEVAEGIKKY-CPNAFVIVIT 128 (321)
T ss_pred E-C----------CCH--HHhCCCCEEEECCCCCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHHHHH-CCCeEEEEec
Confidence 1 0 122 234789999999987532 22 56677888998888888887775 333 455554
|
|
| >cd05288 PGDH Prostaglandin dehydrogenases | Back alignment and domain information |
|---|
Probab=83.74 E-value=5 Score=40.33 Aligned_cols=37 Identities=16% Similarity=0.140 Sum_probs=30.6
Q ss_pred cCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecC
Q 010075 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAA 49 (519)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~ 49 (519)
-.|.+|+|+|++|-+|..+++.+...| .+|++..++.
T Consensus 144 ~~~~~vlI~g~~g~ig~~~~~~a~~~G---~~vi~~~~~~ 180 (329)
T cd05288 144 KPGETVVVSAAAGAVGSVVGQIAKLLG---ARVVGIAGSD 180 (329)
T ss_pred CCCCEEEEecCcchHHHHHHHHHHHcC---CEEEEEeCCH
Confidence 367899999999999999988888777 4778877654
|
Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino |
| >cd01339 LDH-like_MDH L-lactate dehydrogenase-like malate dehydrogenase proteins | Back alignment and domain information |
|---|
Probab=83.57 E-value=13 Score=37.37 Aligned_cols=114 Identities=15% Similarity=0.167 Sum_probs=64.0
Q ss_pred EEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEEeccC
Q 010075 15 ILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVPGDI 94 (519)
Q Consensus 15 VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v~gDl 94 (519)
|.|.|| |.+|..++..|+..+.. +|+++.++........ + ++ .+.. . .......+..
T Consensus 1 I~IIGa-G~vG~~ia~~la~~~l~--eV~L~Di~e~~~~g~~-~--dl-----~~~~-~--------~~~~~~~I~~--- 57 (300)
T cd01339 1 ISIIGA-GNVGATLAQLLALKELG--DVVLLDIVEGLPQGKA-L--DI-----SQAA-P--------ILGSDTKVTG--- 57 (300)
T ss_pred CEEECC-CHHHHHHHHHHHhCCCc--EEEEEeCCCcHHHHHH-H--HH-----HHhh-h--------hcCCCeEEEE---
Confidence 468897 99999999988876532 7888888743211111 1 11 1100 0 0001111111
Q ss_pred CCCCCCCChhhhHHHHhcCccEEEEcCccCC-ccccHHHHHHHhHHHHHHHHHHHHhccCCceEEEEe
Q 010075 95 SSEDLGLKDSNLKEELWNELDIMVNSAAITK-FDERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVS 161 (519)
Q Consensus 95 ~~~~lgls~~~~~~~l~~~vdiViH~Aa~v~-f~~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V~vS 161 (519)
+ .+. ..+.+.|+||-+|+... .+......+..|+.-.+.+++...+...-..++.+|
T Consensus 58 t--------~d~--~~l~dADiVIit~g~p~~~~~~r~e~~~~n~~i~~~i~~~i~~~~p~~~iIv~s 115 (300)
T cd01339 58 T--------NDY--EDIAGSDVVVITAGIPRKPGMSRDDLLGTNAKIVKEVAENIKKYAPNAIVIVVT 115 (300)
T ss_pred c--------CCH--HHhCCCCEEEEecCCCCCcCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEec
Confidence 1 111 23578999999998753 334455667788888888888777653223334443
|
Members of this subfamily have an LDH-like structure and an MDH enzymatic activity. Some members, like MJ0490 from Methanococcus jannaschii, exhibit both MDH and LDH activities. Tetrameric MDHs, including those from phototrophic bacteria, are more similar to LDHs than to other MDHs. LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH-like MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenas |
| >PRK08306 dipicolinate synthase subunit A; Reviewed | Back alignment and domain information |
|---|
Probab=83.52 E-value=3.1 Score=41.90 Aligned_cols=36 Identities=14% Similarity=0.250 Sum_probs=30.4
Q ss_pred cCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecC
Q 010075 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAA 49 (519)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~ 49 (519)
..+++|+|.|+ |.+|+.++..|.+.| .+|++..|+.
T Consensus 150 l~g~kvlViG~-G~iG~~~a~~L~~~G---a~V~v~~r~~ 185 (296)
T PRK08306 150 IHGSNVLVLGF-GRTGMTLARTLKALG---ANVTVGARKS 185 (296)
T ss_pred CCCCEEEEECC-cHHHHHHHHHHHHCC---CEEEEEECCH
Confidence 36899999995 889999999999887 4788888863
|
|
| >KOG0023 consensus Alcohol dehydrogenase, class V [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=82.93 E-value=1.9 Score=43.33 Aligned_cols=76 Identities=9% Similarity=0.158 Sum_probs=50.5
Q ss_pred CCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCc-ccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 010075 11 ENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADI-DSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (519)
Q Consensus 11 ~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~-~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (519)
.|+.|.|+|+.| ||.--++.-..-| .+|+++.++.+. +++.++|- + + .
T Consensus 181 pG~~vgI~GlGG-LGh~aVq~AKAMG---~rV~vis~~~~kkeea~~~LG-----------------A-------d---~ 229 (360)
T KOG0023|consen 181 PGKWVGIVGLGG-LGHMAVQYAKAMG---MRVTVISTSSKKKEEAIKSLG-----------------A-------D---V 229 (360)
T ss_pred CCcEEEEecCcc-cchHHHHHHHHhC---cEEEEEeCCchhHHHHHHhcC-----------------c-------c---e
Confidence 689999999999 9987776666667 789999998633 32222221 1 1 1
Q ss_pred EeccCCCCCCCCChhhhHHHHhcCccEEEEcCccC
Q 010075 90 VPGDISSEDLGLKDSNLKEELWNELDIMVNSAAIT 124 (519)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~~~vdiViH~Aa~v 124 (519)
-.|-++ +.++.+.+.+-.|.++|++...
T Consensus 230 -fv~~~~------d~d~~~~~~~~~dg~~~~v~~~ 257 (360)
T KOG0023|consen 230 -FVDSTE------DPDIMKAIMKTTDGGIDTVSNL 257 (360)
T ss_pred -eEEecC------CHHHHHHHHHhhcCcceeeeec
Confidence 123332 5666667777789999987754
|
|
| >COG0569 TrkA K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=82.80 E-value=3.8 Score=39.46 Aligned_cols=73 Identities=19% Similarity=0.287 Sum_probs=48.4
Q ss_pred CEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEEec
Q 010075 13 KTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVPG 92 (519)
Q Consensus 13 k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v~g 92 (519)
|+++|.| .|=+|..+++.|.+.|+ .|.++.+..... ++.. .. ......+.|
T Consensus 1 m~iiIiG-~G~vG~~va~~L~~~g~---~Vv~Id~d~~~~---~~~~------------~~----------~~~~~~v~g 51 (225)
T COG0569 1 MKIIIIG-AGRVGRSVARELSEEGH---NVVLIDRDEERV---EEFL------------AD----------ELDTHVVIG 51 (225)
T ss_pred CEEEEEC-CcHHHHHHHHHHHhCCC---ceEEEEcCHHHH---HHHh------------hh----------hcceEEEEe
Confidence 5678887 68899999999999984 556766654221 1100 00 145788999
Q ss_pred cCCCCCCCCChhhhHHHH-hcCccEEEEcC
Q 010075 93 DISSEDLGLKDSNLKEEL-WNELDIMVNSA 121 (519)
Q Consensus 93 Dl~~~~lgls~~~~~~~l-~~~vdiViH~A 121 (519)
|-++ .+.++++ +++.|+++=+-
T Consensus 52 d~t~-------~~~L~~agi~~aD~vva~t 74 (225)
T COG0569 52 DATD-------EDVLEEAGIDDADAVVAAT 74 (225)
T ss_pred cCCC-------HHHHHhcCCCcCCEEEEee
Confidence 9994 4444444 57899998443
|
|
| >PRK11199 tyrA bifunctional chorismate mutase/prephenate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=82.51 E-value=7.1 Score=40.74 Aligned_cols=33 Identities=9% Similarity=0.275 Sum_probs=27.8
Q ss_pred CCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEe
Q 010075 12 NKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVR 47 (519)
Q Consensus 12 ~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR 47 (519)
.++|.|.||+|.+|..++..|.+.|+ .|++..|
T Consensus 98 ~~~I~IiGG~GlmG~slA~~l~~~G~---~V~~~d~ 130 (374)
T PRK11199 98 LRPVVIVGGKGQLGRLFAKMLTLSGY---QVRILEQ 130 (374)
T ss_pred cceEEEEcCCChhhHHHHHHHHHCCC---eEEEeCC
Confidence 47899999999999999999999884 4566555
|
|
| >PRK04308 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional | Back alignment and domain information |
|---|
Probab=82.40 E-value=12 Score=39.84 Aligned_cols=87 Identities=20% Similarity=0.269 Sum_probs=53.3
Q ss_pred cCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 010075 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (519)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (519)
+.+++|+|+|+ |-.|..+++.|.+.| .+|.+..+.+... ..++++ +. ...+.+
T Consensus 3 ~~~~~~~v~G~-g~~G~~~a~~l~~~g---~~v~~~d~~~~~~-~~~~l~-------------~~---------~~gi~~ 55 (445)
T PRK04308 3 FQNKKILVAGL-GGTGISMIAYLRKNG---AEVAAYDAELKPE-RVAQIG-------------KM---------FDGLVF 55 (445)
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHHCC---CEEEEEeCCCCch-hHHHHh-------------hc---------cCCcEE
Confidence 45899999997 579999999999988 5666665543321 111221 10 124555
Q ss_pred EeccCCCCCCCCChhhhHHHHhcCccEEEEcCccCCccccHHHHHH
Q 010075 90 VPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKFDERYDVAFG 135 (519)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~~~vdiViH~Aa~v~f~~~~~~~~~ 135 (519)
..|... + ....+.|+||.+.|...-...+..+.+
T Consensus 56 ~~g~~~-------~-----~~~~~~d~vv~spgi~~~~p~~~~a~~ 89 (445)
T PRK04308 56 YTGRLK-------D-----ALDNGFDILALSPGISERQPDIEAFKQ 89 (445)
T ss_pred EeCCCC-------H-----HHHhCCCEEEECCCCCCCCHHHHHHHH
Confidence 555433 1 233578999999988654444555443
|
|
| >TIGR01851 argC_other N-acetyl-gamma-glutamyl-phosphate reductase, uncommon form | Back alignment and domain information |
|---|
Probab=82.09 E-value=3.9 Score=41.34 Aligned_cols=33 Identities=12% Similarity=0.261 Sum_probs=26.3
Q ss_pred EEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEe
Q 010075 14 TILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVR 47 (519)
Q Consensus 14 ~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR 47 (519)
+|+|.||||+.|..|++.|++ .|++.-+++..+
T Consensus 3 ~v~IvGasGy~G~el~rlL~~-HP~~el~~l~s~ 35 (310)
T TIGR01851 3 KVFIDGEAGTTGLQIRERLSG-RDDIELLSIAPD 35 (310)
T ss_pred eEEEECCCChhHHHHHHHHhC-CCCeEEEEEecc
Confidence 699999999999999999888 488754444334
|
This model represents the less common of two related families of N-acetyl-gamma-glutamyl-phosphate reductase, an enzyme catalyzing the third step or Arg biosynthesis from Glu. The two families differ by phylogeny, similarity clustering, and gap architecture in a multiple sequence alignment. |
| >KOG2018 consensus Predicted dinucleotide-utilizing enzyme involved in molybdopterin and thiamine biosynthesis [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=82.06 E-value=11 Score=37.80 Aligned_cols=128 Identities=20% Similarity=0.192 Sum_probs=67.5
Q ss_pred cCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHh---hhhhHHHHHhhhccccccccCCc
Q 010075 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVL---AKDVFNVLKEKWGTRLNSFISEK 86 (519)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~---~~~~f~~l~~~~~~~~~~~~~~~ 86 (519)
.++.-|.|.|+ |.+|++++..|+|+| |.+|-++.-..-..+...|-.-..+ ..|.-..|++.....
T Consensus 72 l~~syVVVVG~-GgVGSwv~nmL~RSG--~qKi~iVDfdqVSlsSLNrHs~Atl~DVG~PK~~clkkh~ski-------- 140 (430)
T KOG2018|consen 72 LTNSYVVVVGA-GGVGSWVANMLLRSG--VQKIRIVDFDQVSLSSLNRHSCATLADVGTPKVMCLKKHFSKI-------- 140 (430)
T ss_pred hcCcEEEEEec-CchhHHHHHHHHHhc--CceEEEechhhccHhhhhhhhhhhHhhcCCchHHHHHHHHHhh--------
Confidence 35566888885 669999999999997 3566555433222222222110000 122233344432211
Q ss_pred eEEEeccCCCCCCCCChhhhHHHHhcCccEEEEcCccCCccccHHHHHHHhHHHHHHHHHHHHhccCCceEEEEecceee
Q 010075 87 ITFVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKFDERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAYVA 166 (519)
Q Consensus 87 v~~v~gDl~~~~lgls~~~~~~~l~~~vdiViH~Aa~v~f~~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V~vSTa~v~ 166 (519)
.-+.+.|-...-.-.+.++ +.+..++|.|+.|-- |+..-..||++|-.. +++. +||.++.
T Consensus 141 aPw~eIdar~~l~~~~s~e--dll~gnPdFvvDciD--------------NidtKVdLL~y~~~~-~l~V---iss~Gaa 200 (430)
T KOG2018|consen 141 APWCEIDARNMLWTSSSEE--DLLSGNPDFVVDCID--------------NIDTKVDLLEYCYNH-GLKV---ISSTGAA 200 (430)
T ss_pred CccceecHHHhhcCCCchh--hhhcCCCCeEeEhhh--------------hhhhhhHHHHHHHHc-CCce---EeccCcc
Confidence 1122333322222222333 245678999999852 455566799999885 6653 4555555
Q ss_pred cC
Q 010075 167 GE 168 (519)
Q Consensus 167 ~~ 168 (519)
+.
T Consensus 201 ak 202 (430)
T KOG2018|consen 201 AK 202 (430)
T ss_pred cc
Confidence 44
|
|
| >PRK12549 shikimate 5-dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=81.98 E-value=6.3 Score=39.44 Aligned_cols=37 Identities=16% Similarity=0.251 Sum_probs=31.3
Q ss_pred cCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecC
Q 010075 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAA 49 (519)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~ 49 (519)
.++++|+|.|+ |..|++++..|...| +.+|+++.|..
T Consensus 125 ~~~k~vlIlGa-GGaaraia~aL~~~G--~~~I~I~nR~~ 161 (284)
T PRK12549 125 ASLERVVQLGA-GGAGAAVAHALLTLG--VERLTIFDVDP 161 (284)
T ss_pred ccCCEEEEECC-cHHHHHHHHHHHHcC--CCEEEEECCCH
Confidence 45789999995 779999999999876 47899999975
|
|
| >TIGR01809 Shik-DH-AROM shikimate-5-dehydrogenase, fungal AROM-type | Back alignment and domain information |
|---|
Probab=81.88 E-value=3.7 Score=41.06 Aligned_cols=37 Identities=19% Similarity=0.219 Sum_probs=31.5
Q ss_pred cCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecC
Q 010075 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAA 49 (519)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~ 49 (519)
.++++|+|.|| |..|++++..|.+.| +.+|++..|+.
T Consensus 123 ~~~k~vlvlGa-GGaarai~~aL~~~G--~~~i~I~nRt~ 159 (282)
T TIGR01809 123 LAGFRGLVIGA-GGTSRAAVYALASLG--VTDITVINRNP 159 (282)
T ss_pred cCCceEEEEcC-cHHHHHHHHHHHHcC--CCeEEEEeCCH
Confidence 46899999985 889999999999876 47899999974
|
This model represents a clade of shikimate-5-dehydrogenases found in Corynebacterium, Mycobacteria and fungi. The fungal sequences are pentafunctional proteins known as AroM which contain the central five seven steps in the chorismate biosynthesis pathway. The Corynebacterium and Mycobacterial sequences represent the sole shikimate-5-dehydrogenases in species which otherwise have every enzyme of the chorismate biosynthesis pathway. |
| >PRK14027 quinate/shikimate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=81.55 E-value=3.5 Score=41.24 Aligned_cols=37 Identities=14% Similarity=0.108 Sum_probs=31.2
Q ss_pred cCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecC
Q 010075 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAA 49 (519)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~ 49 (519)
.++++|+|.|| |..|++++-.|.+.|. .+|++..|+.
T Consensus 125 ~~~k~vlilGa-GGaarAi~~aL~~~g~--~~i~i~nR~~ 161 (283)
T PRK14027 125 AKLDSVVQVGA-GGVGNAVAYALVTHGV--QKLQVADLDT 161 (283)
T ss_pred cCCCeEEEECC-cHHHHHHHHHHHHCCC--CEEEEEcCCH
Confidence 45789999995 8899999999998763 7899998874
|
|
| >cd01486 Apg7 Apg7 is an E1-like protein, that activates two different ubiquitin-like proteins, Apg12 and Apg8, and assigns them to specific E2 enzymes, Apg10 and Apg3, respectively | Back alignment and domain information |
|---|
Probab=81.46 E-value=10 Score=38.15 Aligned_cols=32 Identities=16% Similarity=0.225 Sum_probs=25.7
Q ss_pred EEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEec
Q 010075 14 TILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRA 48 (519)
Q Consensus 14 ~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~ 48 (519)
+|+|.| .|.+|..+++.|.+.| |++|.++...
T Consensus 1 kVLIvG-aGGLGs~vA~~La~aG--Vg~ItlvD~D 32 (307)
T cd01486 1 KCLLLG-AGTLGCNVARNLLGWG--VRHITFVDSG 32 (307)
T ss_pred CEEEEC-CCHHHHHHHHHHHHcC--CCeEEEECCC
Confidence 488998 4679999999999876 6788876543
|
This leads to the covalent conjugation of Apg8 with phosphatidylethanolamine, an important step in autophagy. Autophagy is a dynamic membrane phenomenon for bulk protein degradation in the lysosome/vacuole. |
| >cd08268 MDR2 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family | Back alignment and domain information |
|---|
Probab=81.45 E-value=5.8 Score=39.44 Aligned_cols=37 Identities=11% Similarity=0.117 Sum_probs=31.3
Q ss_pred cCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecC
Q 010075 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAA 49 (519)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~ 49 (519)
-++.+|+|+|++|.+|..++..+...| .+|+++.++.
T Consensus 143 ~~~~~vli~g~~~~~g~~~~~~~~~~g---~~v~~~~~~~ 179 (328)
T cd08268 143 RPGDSVLITAASSSVGLAAIQIANAAG---ATVIATTRTS 179 (328)
T ss_pred CCCCEEEEecCccHHHHHHHHHHHHcC---CEEEEEcCCH
Confidence 367899999999999999999888877 5778887764
|
This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh |
| >PRK01438 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional | Back alignment and domain information |
|---|
Probab=81.20 E-value=13 Score=40.02 Aligned_cols=36 Identities=11% Similarity=0.263 Sum_probs=29.1
Q ss_pred cCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecC
Q 010075 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAA 49 (519)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~ 49 (519)
+.+++|+|.|+ |.+|..+++.|.+.| .+|.+..+..
T Consensus 14 ~~~~~v~viG~-G~~G~~~A~~L~~~G---~~V~~~d~~~ 49 (480)
T PRK01438 14 WQGLRVVVAGL-GVSGFAAADALLELG---ARVTVVDDGD 49 (480)
T ss_pred cCCCEEEEECC-CHHHHHHHHHHHHCC---CEEEEEeCCc
Confidence 56889999995 889999999999888 5677766543
|
|
| >COG4982 3-oxoacyl-[acyl-carrier protein] | Back alignment and domain information |
|---|
Probab=81.07 E-value=53 Score=36.24 Aligned_cols=120 Identities=19% Similarity=0.199 Sum_probs=67.4
Q ss_pred hhcCCCEEEEeCCc-cHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCc
Q 010075 8 EFLENKTILVSGVT-GFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEK 86 (519)
Q Consensus 8 ~~~~~k~VlITGaT-GFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~ 86 (519)
..|.++.++||||+ |-||..++++||.-| .+|++..-.- + .+|+. .|..|-..+.. ....
T Consensus 392 ~~y~d~valVTGA~~gSIaa~Vv~~LL~gG---AtVI~TTS~~-s---~~r~e-------fyr~LYa~~a~-----~ga~ 452 (866)
T COG4982 392 GTYGDKVALVTGASKGSIAAAVVARLLAGG---ATVIATTSRL-S---EERTE-------FYRSLYARHAR-----YGAA 452 (866)
T ss_pred CCcccceEEEecCCCcchHHHHHHHHHhCC---cEEEEEcccc-c---HHHHH-------HHHHHHHhhCC-----CCce
Confidence 45889999999975 889999999999987 5666543321 1 23322 23334443321 1355
Q ss_pred eEEEeccCCCCCCCCChhhhHH------------------HHhcCccEEEEcCccCCc------cccHHHHHHHhHHHHH
Q 010075 87 ITFVPGDISSEDLGLKDSNLKE------------------ELWNELDIMVNSAAITKF------DERYDVAFGINTLGVI 142 (519)
Q Consensus 87 v~~v~gDl~~~~lgls~~~~~~------------------~l~~~vdiViH~Aa~v~f------~~~~~~~~~~Nv~gt~ 142 (519)
+-+|..++.+-. +-|.+- .+...+|.+|-.||.--- +..-+...++=+....
T Consensus 453 LwvVpaN~~Sys----DVdAlIewIg~eq~~t~g~~s~~~k~a~~ptll~PFAAp~v~G~l~~agsraE~~~rilLw~V~ 528 (866)
T COG4982 453 LWVVPANMGSYS----DVDALIEWIGDEQTETVGPQSIHIKLAWTPTLLFPFAAPRVSGELADAGSRAEFAMRILLWNVL 528 (866)
T ss_pred EEEEeccccchh----hHHHHHHHhccccccccCCcceecccccCcceeeecccCCccCccccCCchHHHHHHHHHHHHH
Confidence 677777776421 111110 111246888888886321 1223344555555556
Q ss_pred HHHHHHHh
Q 010075 143 HLVNFAKK 150 (519)
Q Consensus 143 ~ll~~a~~ 150 (519)
+++--.++
T Consensus 529 Rliggl~~ 536 (866)
T COG4982 529 RLIGGLKK 536 (866)
T ss_pred HHHHHhhh
Confidence 66555544
|
|
| >TIGR02824 quinone_pig3 putative NAD(P)H quinone oxidoreductase, PIG3 family | Back alignment and domain information |
|---|
Probab=81.01 E-value=4.7 Score=40.05 Aligned_cols=37 Identities=11% Similarity=0.158 Sum_probs=30.7
Q ss_pred cCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecC
Q 010075 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAA 49 (519)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~ 49 (519)
-.|.+|+|+|++|-+|..+++.+...| .+|++..++.
T Consensus 138 ~~~~~vlv~g~~~~~g~~~~~~a~~~g---~~v~~~~~~~ 174 (325)
T TIGR02824 138 KAGETVLIHGGASGIGTTAIQLAKAFG---ARVFTTAGSD 174 (325)
T ss_pred CCCCEEEEEcCcchHHHHHHHHHHHcC---CEEEEEeCCH
Confidence 357899999999999999988888877 5678877753
|
Members of this family are putative quinone oxidoreductases that belong to the broader superfamily (modeled by Pfam pfam00107) of zinc-dependent alcohol (of medium chain length) dehydrogenases and quinone oxiooreductases. The alignment shows no motif of conserved Cys residues as are found in zinc-binding members of the superfamily, and members are likely to be quinone oxidoreductases instead. A member of this family in Homo sapiens, PIG3, is induced by p53 but is otherwise uncharacterized. |
| >cd08292 ETR_like_2 2-enoyl thioester reductase (ETR) like proteins, child 2 | Back alignment and domain information |
|---|
Probab=80.91 E-value=5.3 Score=40.03 Aligned_cols=36 Identities=14% Similarity=0.106 Sum_probs=30.5
Q ss_pred CCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecC
Q 010075 11 ENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAA 49 (519)
Q Consensus 11 ~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~ 49 (519)
.|.+|+|.||+|-+|..+++.....| .+|++.+++.
T Consensus 139 ~g~~vlI~g~~g~ig~~~~~~a~~~G---~~v~~~~~~~ 174 (324)
T cd08292 139 PGQWLIQNAAGGAVGKLVAMLAAARG---INVINLVRRD 174 (324)
T ss_pred CCCEEEEcccccHHHHHHHHHHHHCC---CeEEEEecCH
Confidence 57899999999999999998888877 5677877764
|
2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordina |
| >cd01488 Uba3_RUB Ubiquitin activating enzyme (E1) subunit UBA3 | Back alignment and domain information |
|---|
Probab=80.62 E-value=16 Score=36.61 Aligned_cols=90 Identities=14% Similarity=0.194 Sum_probs=52.4
Q ss_pred EEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHH----HHHHhh---hhhHHHHHhhhccccccccCCc
Q 010075 14 TILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRF----QNEVLA---KDVFNVLKEKWGTRLNSFISEK 86 (519)
Q Consensus 14 ~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl----~~~~~~---~~~f~~l~~~~~~~~~~~~~~~ 86 (519)
+|||.| .|.+|..+++.|...| |+++.++.-..-..+-..|- .+++-+ ...-+++++..| .-+
T Consensus 1 kVlVVG-aGGlG~eilknLal~G--vg~I~IvD~D~Ve~SNLnRQfLf~~~dIGk~KAevaa~~l~~~np-------~v~ 70 (291)
T cd01488 1 KILVIG-AGGLGCELLKNLALSG--FRNIHVIDMDTIDVSNLNRQFLFREKDIGKPKAEVAAKFVNDRVP-------GVN 70 (291)
T ss_pred CEEEEC-CCHHHHHHHHHHHHcC--CCeEEEECCCEecccccCcCcccChHHcchHHHHHHHHHHHHHCC-------CCE
Confidence 488998 5779999999999876 57888765433221111110 001110 011233444443 246
Q ss_pred eEEEeccCCCCCCCCChhhhHHHHhcCccEEEEcCc
Q 010075 87 ITFVPGDISSEDLGLKDSNLKEELWNELDIMVNSAA 122 (519)
Q Consensus 87 v~~v~gDl~~~~lgls~~~~~~~l~~~vdiViH~Aa 122 (519)
++++.+++.+ .+ ....+++|+||.+.-
T Consensus 71 I~~~~~~i~~-------~~--~~f~~~fdvVi~alD 97 (291)
T cd01488 71 VTPHFGKIQD-------KD--EEFYRQFNIIICGLD 97 (291)
T ss_pred EEEEecccCc-------hh--HHHhcCCCEEEECCC
Confidence 7788888873 22 256688999998743
|
UBA3 is part of the heterodimeric activating enzyme (E1), specific for the Rub family of ubiquitin-like proteins (Ubls). E1 enzymes are part of a conjugation cascade to attach Ub or Ubls, covalently to substrate proteins. consisting of activating (E1), conjugating (E2), and/or ligating (E3) enzymes. E1 activates ubiquitin(-like) by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and Ubls C-terminus. E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Post-translational modification by Rub family of ubiquitin-like proteins (Ublps) activates SCF ubiquitin ligases and is involved in cell cycle control, signaling and embryogenesis. UBA3 contains both the nucleotide-binding motif involved in adenylation and the catalytic cysteine involved in the thioester intermediate and Ublp transfer to E2. |
| >PF05185 PRMT5: PRMT5 arginine-N-methyltransferase; InterPro: IPR007857 The human homologue of Saccharomyces cerevisiae Skb1 (Shk1 kinase-binding protein 1) is a protein methyltransferase [] | Back alignment and domain information |
|---|
Probab=80.62 E-value=3.6 Score=43.97 Aligned_cols=78 Identities=21% Similarity=0.281 Sum_probs=46.5
Q ss_pred CCCEEEEeC-CccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 010075 11 ENKTILVSG-VTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (519)
Q Consensus 11 ~~k~VlITG-aTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (519)
+++.|++.| |||-|....++...+.+. -.+||++-.+.......+++ ++. . ...++|++
T Consensus 186 ~~~vVldVGAGrGpL~~~al~A~~~~~~-a~~VyAVEkn~~A~~~l~~~------------v~~---n----~w~~~V~v 245 (448)
T PF05185_consen 186 KDKVVLDVGAGRGPLSMFALQAGARAGG-AVKVYAVEKNPNAVVTLQKR------------VNA---N----GWGDKVTV 245 (448)
T ss_dssp TT-EEEEES-TTSHHHHHHHHTTHHHCC-ESEEEEEESSTHHHHHHHHH------------HHH---T----TTTTTEEE
T ss_pred cceEEEEeCCCccHHHHHHHHHHHHhCC-CeEEEEEcCCHhHHHHHHHH------------HHh---c----CCCCeEEE
Confidence 468899999 577777776666665552 36899987654322222111 011 1 12478999
Q ss_pred EeccCCCCCCCCChhhhHHHHhcCccEEEE
Q 010075 90 VPGDISSEDLGLKDSNLKEELWNELDIMVN 119 (519)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~~~vdiViH 119 (519)
+.||+++- .+.+++|+||.
T Consensus 246 i~~d~r~v-----------~lpekvDIIVS 264 (448)
T PF05185_consen 246 IHGDMREV-----------ELPEKVDIIVS 264 (448)
T ss_dssp EES-TTTS-----------CHSS-EEEEEE
T ss_pred EeCcccCC-----------CCCCceeEEEE
Confidence 99999942 33458999985
|
These proteins seem to play a role in Jak signalling.; GO: 0008168 methyltransferase activity, 0005737 cytoplasm; PDB: 2Y1W_C 2Y1X_D 2V7E_B 2V74_H 3R0Q_G 3B3F_B 3B3J_A 3B3G_A 3UA3_A 3UA4_B .... |
| >PF12683 DUF3798: Protein of unknown function (DUF3798); InterPro: IPR024258 This entry represents functionally uncharacterised proteins that are found in bacteria | Back alignment and domain information |
|---|
Probab=80.51 E-value=10 Score=37.24 Aligned_cols=63 Identities=32% Similarity=0.367 Sum_probs=39.3
Q ss_pred hHHHHHhhhccccccccCCceEEEeccCCCCCCCCChhhhHHHHhcCccEEEEcCccCCccccHHHHHHHhHHHHHHHHH
Q 010075 67 VFNVLKEKWGTRLNSFISEKITFVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKFDERYDVAFGINTLGVIHLVN 146 (519)
Q Consensus 67 ~f~~l~~~~~~~~~~~~~~~v~~v~gDl~~~~lgls~~~~~~~l~~~vdiViH~Aa~v~f~~~~~~~~~~Nv~gt~~ll~ 146 (519)
.|+++|+.+| .+..+.|+..+ +.. .+.+..|++++.- +...-..+..
T Consensus 78 af~kIkekRp---------DIl~ia~~~~E------Dp~---~i~~~aDi~~~~D---------------~~~~G~~i~~ 124 (275)
T PF12683_consen 78 AFRKIKEKRP---------DILLIAGEPHE------DPE---VISSAADIVVNPD---------------EISRGYTIVW 124 (275)
T ss_dssp HHHHHHHH-T---------TSEEEESS--S-------HH---HHHHHSSEEEE-----------------HHHHHHHHHH
T ss_pred HHHHHHhcCC---------CeEEEcCCCcC------CHH---HHhhccCeEeccc---------------hhhccHHHHH
Confidence 4777787764 46777887764 222 3445678888742 2345567889
Q ss_pred HHHhccCCceEEEEecc
Q 010075 147 FAKKCVKLKVFVHVSTA 163 (519)
Q Consensus 147 ~a~~~~~l~~~V~vSTa 163 (519)
+|+++ +.+.|||+|..
T Consensus 125 ~Ak~m-GAktFVh~sfp 140 (275)
T PF12683_consen 125 AAKKM-GAKTFVHYSFP 140 (275)
T ss_dssp HHHHT-T-S-EEEEEET
T ss_pred HHHHc-CCceEEEEech
Confidence 99999 99999999964
|
They are typically between 247 and 417 amino acids in length. Most of the proteins in this entry have an N-terminal lipoprotein attachment site. These proteins have distant similarity to periplasmic ligand binding families suggesting that this family has a similar role.; PDB: 3QI7_A. |
| >PRK14194 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=80.34 E-value=4.2 Score=40.89 Aligned_cols=33 Identities=21% Similarity=0.305 Sum_probs=28.8
Q ss_pred cCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEE
Q 010075 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLF 45 (519)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~L 45 (519)
+.||+|.|.|.+|.+|+.++..|++.| ..|++.
T Consensus 157 l~Gk~V~vIG~s~ivG~PmA~~L~~~g---atVtv~ 189 (301)
T PRK14194 157 LTGKHAVVIGRSNIVGKPMAALLLQAH---CSVTVV 189 (301)
T ss_pred CCCCEEEEECCCCccHHHHHHHHHHCC---CEEEEE
Confidence 479999999999999999999999988 455554
|
|
| >PRK09880 L-idonate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=80.30 E-value=4.8 Score=41.11 Aligned_cols=36 Identities=17% Similarity=0.298 Sum_probs=28.3
Q ss_pred CCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecC
Q 010075 11 ENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAA 49 (519)
Q Consensus 11 ~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~ 49 (519)
.|.+|+|+|+ |.+|...+..+...|. .+|++..++.
T Consensus 169 ~g~~VlV~G~-G~vG~~aiqlak~~G~--~~Vi~~~~~~ 204 (343)
T PRK09880 169 QGKRVFVSGV-GPIGCLIVAAVKTLGA--AEIVCADVSP 204 (343)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCC--cEEEEEeCCH
Confidence 5889999986 9999998876666553 4788887764
|
|
| >TIGR01771 L-LDH-NAD L-lactate dehydrogenase | Back alignment and domain information |
|---|
Probab=80.28 E-value=33 Score=34.57 Aligned_cols=110 Identities=17% Similarity=0.150 Sum_probs=66.3
Q ss_pred eCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEEeccCCCC
Q 010075 18 SGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVPGDISSE 97 (519)
Q Consensus 18 TGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v~gDl~~~ 97 (519)
.| .|.+|..++-.|+..+ -+.++.++.+.+...... .+ ++.+.. ......+.+..+|
T Consensus 2 IG-aG~VG~~~a~~l~~~~-l~~el~L~Di~~~~~~g~-a~--Dl~~~~--------------~~~~~~~~i~~~~---- 58 (299)
T TIGR01771 2 IG-AGNVGSSTAFALLNQG-IADEIVLIDINKDKAEGE-AM--DLQHAA--------------SFLPTPKKIRSGD---- 58 (299)
T ss_pred CC-cCHHHHHHHHHHHhcC-CCCEEEEEeCCCChhhHH-HH--HHHHhh--------------cccCCCeEEecCC----
Confidence 46 5999999999888754 346788888754322211 11 111110 0011222222111
Q ss_pred CCCCChhhhHHHHhcCccEEEEcCccCCc-cccHHHHHHHhHHHHHHHHHHHHhccCCce-EEEEe
Q 010075 98 DLGLKDSNLKEELWNELDIMVNSAAITKF-DERYDVAFGINTLGVIHLVNFAKKCVKLKV-FVHVS 161 (519)
Q Consensus 98 ~lgls~~~~~~~l~~~vdiViH~Aa~v~f-~~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~-~V~vS 161 (519)
. ..+++.|+||-+|+..+- ..+-...+..|+.-.+.+.+..++. +.+. ++.+|
T Consensus 59 --------~--~~~~daDivVitag~~rk~g~~R~dll~~N~~i~~~~~~~i~~~-~p~~~vivvs 113 (299)
T TIGR01771 59 --------Y--SDCKDADLVVITAGAPQKPGETRLELVGRNVRIMKSIVPEVVKS-GFDGIFLVAT 113 (299)
T ss_pred --------H--HHHCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHh-CCCeEEEEeC
Confidence 1 345789999999997543 3456777999999999999988876 4443 44343
|
This model represents the NAD-dependent L-lactate dehydrogenases from bacteria and eukaryotes. This enzyme function as as the final step in anaerobic glycolysis. Although lactate dehydrogenases have in some cases been mistaken for malate dehydrogenases due to the similarity of these two substrates and the apparent ease with which evolution can toggle these activities, critical residues have been identified which can discriminate between the two activities. At the time of the creation of this model no hits above the trusted cutoff contained critical residues typical of malate dehydrogenases. |
| >PRK00045 hemA glutamyl-tRNA reductase; Reviewed | Back alignment and domain information |
|---|
Probab=80.28 E-value=4.6 Score=42.87 Aligned_cols=37 Identities=22% Similarity=0.343 Sum_probs=30.8
Q ss_pred cCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecC
Q 010075 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAA 49 (519)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~ 49 (519)
..+++|+|.|+ |-+|..++..|...|. .+|++..|+.
T Consensus 180 ~~~~~vlViGa-G~iG~~~a~~L~~~G~--~~V~v~~r~~ 216 (423)
T PRK00045 180 LSGKKVLVIGA-GEMGELVAKHLAEKGV--RKITVANRTL 216 (423)
T ss_pred ccCCEEEEECc-hHHHHHHHHHHHHCCC--CeEEEEeCCH
Confidence 57899999985 9999999999987663 5788888864
|
|
| >COG0169 AroE Shikimate 5-dehydrogenase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=80.14 E-value=5.1 Score=40.03 Aligned_cols=38 Identities=18% Similarity=0.293 Sum_probs=32.3
Q ss_pred CCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCc
Q 010075 11 ENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADI 51 (519)
Q Consensus 11 ~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~ 51 (519)
+|++|+|.| +|..+++++..|++.|. .+|++..|+...
T Consensus 125 ~~~~vlilG-AGGAarAv~~aL~~~g~--~~i~V~NRt~~r 162 (283)
T COG0169 125 TGKRVLILG-AGGAARAVAFALAEAGA--KRITVVNRTRER 162 (283)
T ss_pred CCCEEEEEC-CcHHHHHHHHHHHHcCC--CEEEEEeCCHHH
Confidence 579999999 57799999999999874 789999997643
|
|
| >TIGR01470 cysG_Nterm siroheme synthase, N-terminal domain | Back alignment and domain information |
|---|
Probab=80.11 E-value=12 Score=35.38 Aligned_cols=34 Identities=29% Similarity=0.388 Sum_probs=28.1
Q ss_pred cCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEe
Q 010075 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVR 47 (519)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR 47 (519)
++|++|+|.| .|-+|..-++.|++.| .+|+++..
T Consensus 7 l~gk~vlVvG-gG~va~rk~~~Ll~~g---a~VtVvsp 40 (205)
T TIGR01470 7 LEGRAVLVVG-GGDVALRKARLLLKAG---AQLRVIAE 40 (205)
T ss_pred cCCCeEEEEC-cCHHHHHHHHHHHHCC---CEEEEEcC
Confidence 5789999998 5889999999999988 45666543
|
This model represents a subfamily of CysG N-terminal region-related sequences. All sequences in the seed alignment for this model are N-terminal regions of known or predicted siroheme synthases. The C-terminal region of each is uroporphyrin-III C-methyltransferase (EC 2.1.1.107), which catalyzes the first step committed to the biosynthesis of either siroheme or cobalamin (vitamin B12) rather than protoheme (heme). The region represented by this model completes the process of oxidation and iron insertion to yield siroheme. Siroheme is a cofactor for nitrite and sulfite reductases, so siroheme synthase is CysG of cysteine biosynthesis in some organisms. |
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() | |
| Query | 519 | ||||
| 4dqv_A | 478 | Crystal Structure Of Reductase (R) Domain Of Non-Ri | 2e-10 |
| >pdb|4DQV|A Chain A, Crystal Structure Of Reductase (R) Domain Of Non-Ribosomal Peptide Synthetase From Mycobacterium Tuberculosis Length = 478 | Back alignment and structure |
|
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 519 | |||
| 4dqv_A | 478 | Probable peptide synthetase NRP (peptide synthase; | 1e-41 | |
| 2x4g_A | 342 | Nucleoside-diphosphate-sugar epimerase; isomerase; | 5e-10 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 6e-10 | |
| 3sc6_A | 287 | DTDP-4-dehydrorhamnose reductase; RFBD, structural | 1e-04 | |
| 2ggs_A | 273 | 273AA long hypothetical DTDP-4-dehydrorhamnose red | 1e-04 | |
| 1vl0_A | 292 | DTDP-4-dehydrorhamnose reductase, RFBD ortholog; s | 3e-04 | |
| 2q1s_A | 377 | Putative nucleotide sugar epimerase/ dehydratase; | 4e-04 |
| >4dqv_A Probable peptide synthetase NRP (peptide synthase; GXXGXXG motif, rossmann fold, short chain dehydrogenase/REDU family, reductase; 2.30A {Mycobacterium tuberculosis} Length = 478 | Back alignment and structure |
|---|
Score = 154 bits (391), Expect = 1e-41
Identities = 73/343 (21%), Positives = 121/343 (35%), Gaps = 56/343 (16%)
Query: 11 ENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNV 70
E +T+L++G TGF+ + + ++LR +L VRA + A R + F+
Sbjct: 72 ELRTVLLTGATGFLGRYLVLELLRRLDVDGRLICLVRAESDEDARRRL------EKTFDS 125
Query: 71 LKEKWGTRLNSFISEKITFVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKFDERY 130
+ ++++ V GD S DLGL L +D++V+SAA+ Y
Sbjct: 126 GDPELLRHFKELAADRLEVVAGDKSEPDLGLDQPMW-RRLAETVDLIVDSAAMVNAFP-Y 183
Query: 131 DVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEM 190
FG N G L+ A KLK F +VSTA V S DA++
Sbjct: 184 HELFGPNVAGTAELIRIALTT-KLKPFTYVSTADVGAAI----------EPSAFTEDADI 232
Query: 191 KVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLMQQ--SKEN 248
+VI R GW Y +K GE+L+++
Sbjct: 233 RVIS------------------------PTRTVDGGWAGGYGTSKWAGEVLLREANDLCA 268
Query: 249 LSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQ--------GNLRCLVGETKVIM 300
L + + R ++ + D + + ++ +
Sbjct: 269 LPVAVFRCGMILADTSYAGQLNMSDW--VTRMVLSLMATGIAPRSFYEPDSEGNRQRAHF 326
Query: 301 DVIPVDMVVNAMIVAMVAHAKQPSDAN-IYHVGSSLRNPVTLG 342
D +PV V A+ V A YHV + + + L
Sbjct: 327 DGLPVTFVAEAIAVLGARVAGSSLAGFATYHVMNPHDDGIGLD 369
|
| >2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa} Length = 342 | Back alignment and structure |
|---|
Score = 60.0 bits (146), Expect = 5e-10
Identities = 38/305 (12%), Positives = 72/305 (23%), Gaps = 93/305 (30%)
Query: 15 ILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEK 74
V G TG + I ++ L R +
Sbjct: 16 YAVLGATGLLGHHAARAIRAAGHDLV---LIHRPSS------------------------ 48
Query: 75 WGTRLNSFISEKITFVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKFDER-YDVA 133
++ + ++ D E LD ++ SA R +
Sbjct: 49 ---QIQRLAYLEPECRVAEML-------DHAGLERALRGLDGVIFSAGYYPSRPRRWQEE 98
Query: 134 FGINTLGVIHLVNFAKKCVKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVI 193
+ ++ ++V +AY
Sbjct: 99 VASALGQTNPFYAACLQA-RVPRILYVGSAYAMPRHP----------------------- 134
Query: 194 DQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEML-MQQSKENLSLV 252
+G P E + YV K + +Q++ L +V
Sbjct: 135 ---------QGLPGHEGLFY-----DSLPSGKSS---YVLCKWALDEQAREQARNGLPVV 177
Query: 253 IIRPTVVSGTYKEPFPGWVEDLK-TINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNA 311
I P +V G D+ T + A G + V +VI
Sbjct: 178 IGIPGMVLG------EL---DIGPTTGRVITAIGNGEMTHYVAGQ---RNVIDAAEAGRG 225
Query: 312 MIVAM 316
+++A+
Sbjct: 226 LLMAL 230
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 61.0 bits (147), Expect = 6e-10
Identities = 75/516 (14%), Positives = 142/516 (27%), Gaps = 180/516 (34%)
Query: 12 NKTILVSGVTGF-----VAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKD 66
K +L+ GV G V + ++ + + K +L ++ + L ++L +
Sbjct: 150 AKNVLIDGVLGSGKTWVALDVCLSYKVQCKMDFKIFWLNLKNCNSPETVLEMLQKLLYQ- 208
Query: 67 VFNVLKEKWGTRLNSFISEKITFVPGDISSEDLGLKDSNL--KEELWNELDIM--VNSAA 122
+ W +R + + K+ + + L + N L ++ V +A
Sbjct: 209 ----IDPNWTSRSDHSSNIKLRI-------HSIQAELRRLLKSKPYENCLLVLLNVQNAK 257
Query: 123 ITKFDERYDVAFGINTLGVIHLVNFAKKCVKLKVFV-----HVSTAYVAGERTGLILENP 177
AF + C K+ + V+ A T + L++
Sbjct: 258 AWN-------AFNL-------------SC---KILLTTRFKQVTDFLSAATTTHISLDHH 294
Query: 178 LDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTER---------------- 221
L + K L +K L
Sbjct: 295 SMT----------------LTPDEVKS-------LLLKYLDCRPQDLPREVLTTNPRRLS 331
Query: 222 ---AKLHGWPNTYVFTKTMG----EMLMQQSKENLSLVIIRPTVVSGTYKEP--FPGWVE 272
+ T+ K + +++ S L P + FP
Sbjct: 332 IIAESIRDGLATWDNWKHVNCDKLTTIIESSLNVLE-----PAEYRKMFDRLSVFP---P 383
Query: 273 DLK-TINTLFVASAQGNLRCLV-GETKVIMDVIPVDMVVNAMIVAMVAHAKQPSDA--NI 328
L L+ + + V +VVN + + KQP ++ +I
Sbjct: 384 SAHIPTILL----------SLIWFD----VIKSDVMVVVNKLHKYSLV-EKQPKESTISI 428
Query: 329 YHVGSSLRNPVTLGLQVAN-TVFHNFFKGVYNDLRKKVKFVMRVVEIYKP----YFY--- 380
+ L+ +++ N H YN + ++ P YFY
Sbjct: 429 PSIYLELK------VKLENEYALHRSIVDHYNIPKTFDSD-----DLIPPYLDQYFYSHI 477
Query: 381 ---------------FNGIFDDTN--TEKLRMT-----ARGSRTET--DL-FYFDPDSIE 415
F +F D +K+R A GS T L FY
Sbjct: 478 GHHLKNIEHPERMTLFRMVFLDFRFLEQKIRHDSTAWNASGSILNTLQQLKFY------- 530
Query: 416 WSDYFMNTHIPGVEKLLQQKRSF---PKTKVFRSGH 448
Y + P E+L+ F + + S +
Sbjct: 531 -KPYICDND-PKYERLVNAILDFLPKIEENLICSKY 564
|
| >3sc6_A DTDP-4-dehydrorhamnose reductase; RFBD, structural genomics, infectious diseases, bacillus anthracis STR. AMES, rhamnose biosynthetic pathway; HET: NAP; 2.65A {Bacillus anthracis} Length = 287 | Back alignment and structure |
|---|
Score = 43.3 bits (103), Expect = 1e-04
Identities = 21/73 (28%), Positives = 35/73 (47%), Gaps = 12/73 (16%)
Query: 115 DIMVNSAAITKFD---ERYDVAFGINTLGVIHLVNFAKKCVKLKV-FVHVSTAYV-AGER 169
I+++ AA TK D + D+A+ IN +G ++ A + V++ST YV G+R
Sbjct: 58 HIIIHCAAYTKVDQAEKERDLAYVINAIGARNV---AVASQLVGAKLVYISTDYVFQGDR 114
Query: 170 TGLILE----NPL 178
E P+
Sbjct: 115 PEGYDEFHNPAPI 127
|
| >2ggs_A 273AA long hypothetical DTDP-4-dehydrorhamnose reductase; alpha, beta, oxidoreductase; HET: NDP; 1.70A {Sulfolobus tokodaii} Length = 273 | Back alignment and structure |
|---|
Score = 42.6 bits (101), Expect = 1e-04
Identities = 24/108 (22%), Positives = 44/108 (40%), Gaps = 14/108 (12%)
Query: 63 LAKDVFNVLKEKWGTRLNSFISEKITFVPGDISSEDLGLKDSNLKEELW-NELDIMVNSA 121
L ++ +L E+ SE D++ L++ + D+++N+A
Sbjct: 12 LGIELSRLLSERHEVIKVYNSSEIQGGYKLDLTDFP------RLEDFIIKKRPDVIINAA 65
Query: 122 AITKFD---ERYDVAFGINTLGVIHLVNFAKKCVKLKV-FVHVSTAYV 165
A+T D + A+ IN V H+ + + VH+ST YV
Sbjct: 66 AMTDVDKCEIEKEKAYKINAEAVRHI---VRAGKVIDSYIVHISTDYV 110
|
| >1vl0_A DTDP-4-dehydrorhamnose reductase, RFBD ortholog; structural joint center for structural genomics, JCSG, protein structu initiative; HET: NAI UNL; 2.05A {Clostridium acetobutylicum} SCOP: c.2.1.2 Length = 292 | Back alignment and structure |
|---|
Score = 42.1 bits (100), Expect = 3e-04
Identities = 19/55 (34%), Positives = 30/55 (54%), Gaps = 7/55 (12%)
Query: 115 DIMVNSAAITKFD---ERYDVAFGINTLGVIHLVNFAKKCVKLKV-FVHVSTAYV 165
++++N AA T D E+YD+A+ IN +G +L A + V +ST YV
Sbjct: 65 NVVINCAAHTAVDKCEEQYDLAYKINAIGPKNL---AAAAYSVGAEIVQISTDYV 116
|
| >2q1s_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NADH complex, sugar binding protein; HET: NAI; 1.50A {Bordetella bronchiseptica} PDB: 2pzj_A* 2q1t_A* 2q1u_A* Length = 377 | Back alignment and structure |
|---|
Score = 41.5 bits (98), Expect = 4e-04
Identities = 32/168 (19%), Positives = 51/168 (30%), Gaps = 41/168 (24%)
Query: 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFN 69
L N ++V G GFV ++++L N+V D
Sbjct: 30 LANTNVMVVGGAGFVGSNLVKRLLE----------------------LGVNQVHVVDNLL 67
Query: 70 VLKEKWGTRLNSFISEKITFVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAIT----- 124
++N + F I+ D L L +E D + + A
Sbjct: 68 S-----AEKINVPDHPAVRFSETSIT-------DDALLASLQDEYDYVFHLATYHGNQSS 115
Query: 125 KFDERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAYVAGERTGL 172
D D NTL + L K +LK V+ + E+T
Sbjct: 116 IHDPLADHE--NNTLTTLKLYERLKHFKRLKKVVYSAAGCSIAEKTFD 161
|
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 519 | |||
| 3ruf_A | 351 | WBGU; rossmann fold, UDP-hexose 4-epimerase, isome | 100.0 | |
| 4egb_A | 346 | DTDP-glucose 4,6-dehydratase; rhamnose pathway, ce | 99.98 | |
| 3sxp_A | 362 | ADP-L-glycero-D-mannoheptose-6-epimerase; rossman | 99.97 | |
| 3m2p_A | 311 | UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J | 99.97 | |
| 4dqv_A | 478 | Probable peptide synthetase NRP (peptide synthase; | 99.97 | |
| 3slg_A | 372 | PBGP3 protein; structural genomics, seattle struct | 99.97 | |
| 3enk_A | 341 | UDP-glucose 4-epimerase; seattle structural genomi | 99.97 | |
| 3ko8_A | 312 | NAD-dependent epimerase/dehydratase; isomerase, UD | 99.97 | |
| 4id9_A | 347 | Short-chain dehydrogenase/reductase; putative dehy | 99.97 | |
| 2hun_A | 336 | 336AA long hypothetical DTDP-glucose 4,6-dehydrat; | 99.97 | |
| 4f6l_B | 508 | AUSA reductase domain protein; thioester reductase | 99.97 | |
| 1sb8_A | 352 | WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCN | 99.97 | |
| 4f6c_A | 427 | AUSA reductase domain protein; thioester reductase | 99.97 | |
| 4b8w_A | 319 | GDP-L-fucose synthase; oxidoreductase; HET: NAP GD | 99.97 | |
| 2pk3_A | 321 | GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, shor | 99.97 | |
| 1rkx_A | 357 | CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; | 99.97 | |
| 2c20_A | 330 | UDP-glucose 4-epimerase; carbohydrate metabolism, | 99.97 | |
| 1i24_A | 404 | Sulfolipid biosynthesis protein SQD1; SDR, short-c | 99.97 | |
| 1r6d_A | 337 | TDP-glucose-4,6-dehydratase; rossmann fold, short- | 99.97 | |
| 3ehe_A | 313 | UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC, | 99.97 | |
| 1ek6_A | 348 | UDP-galactose 4-epimerase; short-chain dehydrogena | 99.96 | |
| 2x4g_A | 342 | Nucleoside-diphosphate-sugar epimerase; isomerase; | 99.96 | |
| 2c5a_A | 379 | GDP-mannose-3', 5'-epimerase; short chain dehydrat | 99.96 | |
| 2bll_A | 345 | Protein YFBG; decarboxylase, short chain dehydroge | 99.96 | |
| 1oc2_A | 348 | DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnos | 99.96 | |
| 1gy8_A | 397 | UDP-galactose 4-epimerase; oxidoreductase; HET: NA | 99.96 | |
| 2q1s_A | 377 | Putative nucleotide sugar epimerase/ dehydratase; | 99.96 | |
| 1orr_A | 347 | CDP-tyvelose-2-epimerase; rossmann fold, short-cha | 99.96 | |
| 2yy7_A | 312 | L-threonine dehydrogenase; thermolabIle, flavobact | 99.96 | |
| 1rpn_A | 335 | GDP-mannose 4,6-dehydratase; short-chain dehydroge | 99.96 | |
| 1kew_A | 361 | RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fo | 99.96 | |
| 2p5y_A | 311 | UDP-glucose 4-epimerase; TTHA0591, structural geno | 99.96 | |
| 2b69_A | 343 | UDP-glucuronate decarboxylase 1; UDP-glucoronic ac | 99.96 | |
| 2gn4_A | 344 | FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann | 99.96 | |
| 3gpi_A | 286 | NAD-dependent epimerase/dehydratase; structural ge | 99.96 | |
| 2x6t_A | 357 | ADP-L-glycero-D-manno-heptose-6-epimerase; isomera | 99.96 | |
| 1y1p_A | 342 | ARII, aldehyde reductase II; rossmann fold, short | 99.96 | |
| 3vps_A | 321 | TUNA, NAD-dependent epimerase/dehydratase; tunicam | 99.96 | |
| 1e6u_A | 321 | GDP-fucose synthetase; epimerase/reductase, SDR, R | 99.96 | |
| 1eq2_A | 310 | ADP-L-glycero-D-mannoheptose 6-epimerase; N-termin | 99.96 | |
| 1udb_A | 338 | Epimerase, UDP-galactose-4-epimerase; isomerase; H | 99.95 | |
| 2pzm_A | 330 | Putative nucleotide sugar epimerase/ dehydratase; | 99.95 | |
| 2z1m_A | 345 | GDP-D-mannose dehydratase; short-chain dehydrogena | 99.95 | |
| 3ajr_A | 317 | NDP-sugar epimerase; L-threonine dehydrogenase, L- | 99.95 | |
| 2q1w_A | 333 | Putative nucleotide sugar epimerase/ dehydratase; | 99.95 | |
| 3sc6_A | 287 | DTDP-4-dehydrorhamnose reductase; RFBD, structural | 99.95 | |
| 3dhn_A | 227 | NAD-dependent epimerase/dehydratase; reductase, PF | 99.95 | |
| 2ydy_A | 315 | Methionine adenosyltransferase 2 subunit beta; oxi | 99.95 | |
| 1t2a_A | 375 | GDP-mannose 4,6 dehydratase; structural genomics c | 99.95 | |
| 1z45_A | 699 | GAL10 bifunctional protein; epimerase, mutarotase, | 99.95 | |
| 1n2s_A | 299 | DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold | 99.95 | |
| 2hrz_A | 342 | AGR_C_4963P, nucleoside-diphosphate-sugar epimeras | 99.95 | |
| 3ius_A | 286 | Uncharacterized conserved protein; APC63810, silic | 99.95 | |
| 1db3_A | 372 | GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lya | 99.95 | |
| 1z7e_A | 660 | Protein aRNA; rossmann fold, OB-like fold, hydrola | 99.94 | |
| 2p4h_X | 322 | Vestitone reductase; NADPH-dependent reductase, is | 99.94 | |
| 1vl0_A | 292 | DTDP-4-dehydrorhamnose reductase, RFBD ortholog; s | 99.94 | |
| 4b4o_A | 298 | Epimerase family protein SDR39U1; isomerase; HET: | 99.94 | |
| 1n7h_A | 381 | GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR, | 99.94 | |
| 3nzo_A | 399 | UDP-N-acetylglucosamine 4,6-dehydratase; structura | 99.94 | |
| 2c29_D | 337 | Dihydroflavonol 4-reductase; flavonoids, short deh | 99.94 | |
| 2rh8_A | 338 | Anthocyanidin reductase; flavonoids, rossmann fold | 99.94 | |
| 3rft_A | 267 | Uronate dehydrogenase; apoenzyme, rossmann fold, N | 99.94 | |
| 2v6g_A | 364 | Progesterone 5-beta-reductase; tyrosine-dependent | 99.93 | |
| 3oh8_A | 516 | Nucleoside-diphosphate sugar epimerase (SULA FAMI; | 99.93 | |
| 3e8x_A | 236 | Putative NAD-dependent epimerase/dehydratase; stru | 99.93 | |
| 3dqp_A | 219 | Oxidoreductase YLBE; alpha-beta protein., structur | 99.93 | |
| 3st7_A | 369 | Capsular polysaccharide synthesis enzyme CAP5F; ro | 99.92 | |
| 3ay3_A | 267 | NAD-dependent epimerase/dehydratase; glucuronic ac | 99.92 | |
| 2ggs_A | 273 | 273AA long hypothetical DTDP-4-dehydrorhamnose red | 99.92 | |
| 2jl1_A | 287 | Triphenylmethane reductase; oxidoreductase, biorem | 99.92 | |
| 3h2s_A | 224 | Putative NADH-flavin reductase; Q03B84, NESG, LCR1 | 99.91 | |
| 2bka_A | 242 | CC3, TAT-interacting protein TIP30; NADPH, PEG600, | 99.91 | |
| 2a35_A | 215 | Hypothetical protein PA4017; alpha-beta-alpha sand | 99.9 | |
| 3ew7_A | 221 | LMO0794 protein; Q8Y8U8_lismo, putative NAD-depend | 99.9 | |
| 3i6i_A | 346 | Putative leucoanthocyanidin reductase 1; rossmann | 99.9 | |
| 1hdo_A | 206 | Biliverdin IX beta reductase; foetal metabolism, H | 99.9 | |
| 2zcu_A | 286 | Uncharacterized oxidoreductase YTFG; alpha-beta sa | 99.9 | |
| 1xq6_A | 253 | Unknown protein; structural genomics, protein stru | 99.88 | |
| 2wm3_A | 299 | NMRA-like family domain containing protein 1; unkn | 99.88 | |
| 3e48_A | 289 | Putative nucleoside-diphosphate-sugar epimerase; a | 99.88 | |
| 1xgk_A | 352 | Nitrogen metabolite repression regulator NMRA; ros | 99.86 | |
| 1fmc_A | 255 | 7 alpha-hydroxysteroid dehydrogenase; short-chain | 99.86 | |
| 2dkn_A | 255 | 3-alpha-hydroxysteroid dehydrogenase; oxidoreducta | 99.86 | |
| 3m1a_A | 281 | Putative dehydrogenase; short, PSI, MCSG, structur | 99.85 | |
| 1cyd_A | 244 | Carbonyl reductase; short-chain dehydrogenase, oxi | 99.85 | |
| 3d3w_A | 244 | L-xylulose reductase; uronate cycle, short-chain d | 99.85 | |
| 2bgk_A | 278 | Rhizome secoisolariciresinol dehydrogenase; oxidor | 99.84 | |
| 1qyd_A | 313 | Pinoresinol-lariciresinol reductase; NADPH-depende | 99.84 | |
| 4e6p_A | 259 | Probable sorbitol dehydrogenase (L-iditol 2-dehyd; | 99.84 | |
| 3awd_A | 260 | GOX2181, putative polyol dehydrogenase; oxidoreduc | 99.84 | |
| 2gas_A | 307 | Isoflavone reductase; NADPH-dependent reductase, o | 99.83 | |
| 3r6d_A | 221 | NAD-dependent epimerase/dehydratase; structural ge | 99.83 | |
| 2wsb_A | 254 | Galactitol dehydrogenase; oxidoreductase, SDR, ros | 99.83 | |
| 3qvo_A | 236 | NMRA family protein; structural genomics, PSI-biol | 99.83 | |
| 2pnf_A | 248 | 3-oxoacyl-[acyl-carrier-protein] reductase; short | 99.83 | |
| 1ja9_A | 274 | 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; p | 99.82 | |
| 3un1_A | 260 | Probable oxidoreductase; structural genomics, PSI- | 99.82 | |
| 2yut_A | 207 | Putative short-chain oxidoreductase; alpha and bet | 99.82 | |
| 3afn_B | 258 | Carbonyl reductase; alpha/beta/alpha, rossmann-fol | 99.82 | |
| 3c1o_A | 321 | Eugenol synthase; phenylpropene, PIP reductase, sh | 99.82 | |
| 1xq1_A | 266 | Putative tropinone reducatse; structural genomics, | 99.82 | |
| 2r6j_A | 318 | Eugenol synthase 1; phenylpropene, PIP reductase, | 99.82 | |
| 1uay_A | 242 | Type II 3-hydroxyacyl-COA dehydrogenase; beta oxid | 99.82 | |
| 2hq1_A | 247 | Glucose/ribitol dehydrogenase; CTH-1438, structura | 99.82 | |
| 1qyc_A | 308 | Phenylcoumaran benzylic ether reductase PT1; NADPH | 99.81 | |
| 3d7l_A | 202 | LIN1944 protein; APC89317, structural genomics, PS | 99.81 | |
| 1edo_A | 244 | Beta-keto acyl carrier protein reductase; nucleoti | 99.81 | |
| 3osu_A | 246 | 3-oxoacyl-[acyl-carrier-protein] reductase; struct | 99.81 | |
| 3ai3_A | 263 | NADPH-sorbose reductase; rossmann-fold, NADPH-depe | 99.81 | |
| 1sby_A | 254 | Alcohol dehydrogenase; ternary complex, NAD, trifl | 99.81 | |
| 2pd6_A | 264 | Estradiol 17-beta-dehydrogenase 8; short-chain deh | 99.81 | |
| 1h5q_A | 265 | NADP-dependent mannitol dehydrogenase; oxidoreduct | 99.81 | |
| 3f9i_A | 249 | 3-oxoacyl-[acyl-carrier-protein] reductase; 3-keto | 99.81 | |
| 2d1y_A | 256 | Hypothetical protein TT0321; strucrtural genomics, | 99.8 | |
| 1nff_A | 260 | Putative oxidoreductase RV2002; directed evolution | 99.8 | |
| 1gee_A | 261 | Glucose 1-dehydrogenase; short-chain dehydrogenase | 99.8 | |
| 3s55_A | 281 | Putative short-chain dehydrogenase/reductase; stru | 99.8 | |
| 1w6u_A | 302 | 2,4-dienoyl-COA reductase, mitochondrial precursor | 99.8 | |
| 2zat_A | 260 | Dehydrogenase/reductase SDR family member 4; alpha | 99.8 | |
| 3gaf_A | 256 | 7-alpha-hydroxysteroid dehydrogenase; seattle stru | 99.8 | |
| 2cfc_A | 250 | 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidor | 99.8 | |
| 3lyl_A | 247 | 3-oxoacyl-(acyl-carrier-protein) reductase; alpha | 99.8 | |
| 3tzq_B | 271 | Short-chain type dehydrogenase/reductase; ssgcid, | 99.8 | |
| 2wyu_A | 261 | Enoyl-[acyl carrier protein] reductase; oxidoreduc | 99.8 | |
| 3tpc_A | 257 | Short chain alcohol dehydrogenase-related dehydro; | 99.8 | |
| 1spx_A | 278 | Short-chain reductase family member (5L265); paral | 99.79 | |
| 3pgx_A | 280 | Carveol dehydrogenase; structural genomics, seattl | 99.79 | |
| 1zk4_A | 251 | R-specific alcohol dehydrogenase; short chain redu | 99.79 | |
| 3ak4_A | 263 | NADH-dependent quinuclidinone reductase; SDR, (R)- | 99.79 | |
| 2q2v_A | 255 | Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidore | 99.79 | |
| 2ae2_A | 260 | Protein (tropinone reductase-II); oxidoreductase, | 99.79 | |
| 3v2h_A | 281 | D-beta-hydroxybutyrate dehydrogenase; structural g | 99.79 | |
| 2ph3_A | 245 | 3-oxoacyl-[acyl carrier protein] reductase; TTHA04 | 99.79 | |
| 1mxh_A | 276 | Pteridine reductase 2; SDR topology, protein-subst | 99.79 | |
| 2o23_A | 265 | HADH2 protein; HSD17B10, schad, ERAB, type II HADH | 99.79 | |
| 2bd0_A | 244 | Sepiapterin reductase; oxidoreductase; HET: NAP BI | 99.79 | |
| 3qiv_A | 253 | Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR | 99.79 | |
| 3sx2_A | 278 | Putative 3-ketoacyl-(acyl-carrier-protein) reduct; | 99.79 | |
| 3pk0_A | 262 | Short-chain dehydrogenase/reductase SDR; ssgcid, s | 99.79 | |
| 2z1n_A | 260 | Dehydrogenase; reductase, SDR, oxidoreductase; 1.8 | 99.79 | |
| 4e3z_A | 272 | Putative oxidoreductase protein; PSI-biology, stru | 99.78 | |
| 1x1t_A | 260 | D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, S | 99.78 | |
| 2fwm_X | 250 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; e | 99.78 | |
| 3ijr_A | 291 | Oxidoreductase, short chain dehydrogenase/reducta; | 99.78 | |
| 1hdc_A | 254 | 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxi | 99.78 | |
| 2rhc_B | 277 | Actinorhodin polyketide ketoreductase; oxidoreduct | 99.78 | |
| 4dmm_A | 269 | 3-oxoacyl-[acyl-carrier-protein] reductase; rossma | 99.78 | |
| 3r1i_A | 276 | Short-chain type dehydrogenase/reductase; structur | 99.78 | |
| 3n74_A | 261 | 3-ketoacyl-(acyl-carrier-protein) reductase; seatt | 99.78 | |
| 2p91_A | 285 | Enoyl-[acyl-carrier-protein] reductase [NADH]; NAD | 99.78 | |
| 2c07_A | 285 | 3-oxoacyl-(acyl-carrier protein) reductase; oxidor | 99.78 | |
| 3uf0_A | 273 | Short-chain dehydrogenase/reductase SDR; gluconate | 99.78 | |
| 3op4_A | 248 | 3-oxoacyl-[acyl-carrier protein] reductase; 3-keto | 99.78 | |
| 1qsg_A | 265 | Enoyl-[acyl-carrier-protein] reductase; enoyl redu | 99.78 | |
| 3vtz_A | 269 | Glucose 1-dehydrogenase; rossmann fold, oxidoreduc | 99.78 | |
| 3tox_A | 280 | Short chain dehydrogenase; structural genomics, PS | 99.78 | |
| 2ew8_A | 249 | (S)-1-phenylethanol dehydrogenase; transferase; 2. | 99.78 | |
| 2dtx_A | 264 | Glucose 1-dehydrogenase related protein; rossmann | 99.78 | |
| 3svt_A | 281 | Short-chain type dehydrogenase/reductase; ssgcid, | 99.78 | |
| 4dqx_A | 277 | Probable oxidoreductase protein; structural genomi | 99.77 | |
| 3i4f_A | 264 | 3-oxoacyl-[acyl-carrier protein] reductase; struct | 99.77 | |
| 2uvd_A | 246 | 3-oxoacyl-(acyl-carrier-protein) reductase; beta-k | 99.77 | |
| 3rih_A | 293 | Short chain dehydrogenase or reductase; structural | 99.77 | |
| 3ctm_A | 279 | Carbonyl reductase; alcohol dehydrogenase, short-c | 99.77 | |
| 4eso_A | 255 | Putative oxidoreductase; NADP, structural genomics | 99.77 | |
| 3o38_A | 266 | Short chain dehydrogenase; tuberculosis, ortholog | 99.77 | |
| 1yxm_A | 303 | Pecra, peroxisomal trans 2-enoyl COA reductase; pe | 99.77 | |
| 3v2g_A | 271 | 3-oxoacyl-[acyl-carrier-protein] reductase; struct | 99.77 | |
| 3grp_A | 266 | 3-oxoacyl-(acyl carrierprotein) reductase; structu | 99.77 | |
| 3ftp_A | 270 | 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid | 99.77 | |
| 4iin_A | 271 | 3-ketoacyl-acyl carrier protein reductase (FABG); | 99.77 | |
| 3gem_A | 260 | Short chain dehydrogenase; structural genomics, AP | 99.77 | |
| 1sny_A | 267 | Sniffer CG10964-PA; alpha and beta protein, rossma | 99.77 | |
| 2ag5_A | 246 | DHRS6, dehydrogenase/reductase (SDR family) member | 99.77 | |
| 1ae1_A | 273 | Tropinone reductase-I; oxidoreductase, tropane alk | 99.77 | |
| 3gvc_A | 277 | Oxidoreductase, probable short-chain type dehydrog | 99.77 | |
| 3ucx_A | 264 | Short chain dehydrogenase; ssgcid, seattle structu | 99.77 | |
| 1hxh_A | 253 | 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-b | 99.77 | |
| 3ksu_A | 262 | 3-oxoacyl-acyl carrier protein reductase; structur | 99.77 | |
| 3r3s_A | 294 | Oxidoreductase; structural genomics, csgid, center | 99.77 | |
| 3imf_A | 257 | Short chain dehydrogenase; structural genomics, in | 99.77 | |
| 3cxt_A | 291 | Dehydrogenase with different specificities; rossma | 99.76 | |
| 4da9_A | 280 | Short-chain dehydrogenase/reductase; structural ge | 99.76 | |
| 3uxy_A | 266 | Short-chain dehydrogenase/reductase SDR; structura | 99.76 | |
| 3u9l_A | 324 | 3-oxoacyl-[acyl-carrier-protein] reductase; struct | 99.76 | |
| 1o5i_A | 249 | 3-oxoacyl-(acyl carrier protein) reductase; TM1169 | 99.76 | |
| 1g0o_A | 283 | Trihydroxynaphthalene reductase; protein-NADPH-act | 99.76 | |
| 3pxx_A | 287 | Carveol dehydrogenase; structural genomics, seattl | 99.76 | |
| 4iiu_A | 267 | 3-oxoacyl-[acyl-carrier protein] reductase; struct | 99.76 | |
| 1yo6_A | 250 | Putative carbonyl reductase sniffer; tyrosine-depe | 99.76 | |
| 3a28_C | 258 | L-2.3-butanediol dehydrogenase; chiral substrate r | 99.76 | |
| 1ooe_A | 236 | Dihydropteridine reductase; structural genomics, P | 99.76 | |
| 3oid_A | 258 | Enoyl-[acyl-carrier-protein] reductase [NADPH]; fa | 99.76 | |
| 1uzm_A | 247 | 3-oxoacyl-[acyl-carrier protein] reductase; beta-k | 99.76 | |
| 3edm_A | 259 | Short chain dehydrogenase; structural genomics, ox | 99.75 | |
| 3tsc_A | 277 | Putative oxidoreductase; structural genomics, seat | 99.75 | |
| 1iy8_A | 267 | Levodione reductase; oxidoreductase; HET: NAD; 1.6 | 99.75 | |
| 4ibo_A | 271 | Gluconate dehydrogenase; enzyme function initiativ | 99.75 | |
| 3grk_A | 293 | Enoyl-(acyl-carrier-protein) reductase (NADH); ssg | 99.75 | |
| 3sju_A | 279 | Keto reductase; short-chain dehydrogenase, oxidore | 99.75 | |
| 3ezl_A | 256 | Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA | 99.75 | |
| 3f1l_A | 252 | Uncharacterized oxidoreductase YCIK; E. coli, NADP | 99.75 | |
| 3oig_A | 266 | Enoyl-[acyl-carrier-protein] reductase [NADH]; fat | 99.75 | |
| 3ek2_A | 271 | Enoyl-(acyl-carrier-protein) reductase (NADH); ssg | 99.75 | |
| 3tjr_A | 301 | Short chain dehydrogenase; structural genomics, se | 99.75 | |
| 1xkq_A | 280 | Short-chain reductase family member (5D234); parra | 99.75 | |
| 3ioy_A | 319 | Short-chain dehydrogenase/reductase SDR; structura | 99.75 | |
| 3gk3_A | 269 | Acetoacetyl-COA reductase; acetoacetyl-CO reductas | 99.75 | |
| 2pd4_A | 275 | Enoyl-[acyl-carrier-protein] reductase [NADH]; ant | 99.75 | |
| 3rwb_A | 247 | TPLDH, pyridoxal 4-dehydrogenase; short chain dehy | 99.75 | |
| 3v8b_A | 283 | Putative dehydrogenase, possibly 3-oxoacyl-[acyl- | 99.75 | |
| 1geg_A | 256 | Acetoin reductase; SDR family, oxidoreductase; HET | 99.75 | |
| 3tl3_A | 257 | Short-chain type dehydrogenase/reductase; ssgcid, | 99.75 | |
| 2b4q_A | 276 | Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier | 99.75 | |
| 4egf_A | 266 | L-xylulose reductase; structural genomics, ssgcid, | 99.75 | |
| 3t4x_A | 267 | Oxidoreductase, short chain dehydrogenase/reducta; | 99.75 | |
| 3dii_A | 247 | Short-chain dehydrogenase/reductase SDR; SCOR, ros | 99.75 | |
| 1xhl_A | 297 | Short-chain dehydrogenase/reductase family member | 99.74 | |
| 3rd5_A | 291 | Mypaa.01249.C; ssgcid, structural genomics, seattl | 99.74 | |
| 3uve_A | 286 | Carveol dehydrogenase ((+)-trans-carveol dehydrog; | 99.74 | |
| 3u5t_A | 267 | 3-oxoacyl-[acyl-carrier-protein] reductase; struct | 99.74 | |
| 3nrc_A | 280 | Enoyl-[acyl-carrier-protein] reductase (NADH); ros | 99.74 | |
| 3is3_A | 270 | 17BETA-hydroxysteroid dehydrogenase; short chain d | 99.74 | |
| 1uls_A | 245 | Putative 3-oxoacyl-acyl carrier protein reductase; | 99.74 | |
| 3l77_A | 235 | Short-chain alcohol dehydrogenase; oxidoreductase; | 99.74 | |
| 3oec_A | 317 | Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; | 99.74 | |
| 1vl8_A | 267 | Gluconate 5-dehydrogenase; TM0441, structural geno | 99.74 | |
| 1wma_A | 276 | Carbonyl reductase [NADPH] 1; oxidoreductase; HET: | 99.74 | |
| 4e4y_A | 244 | Short chain dehydrogenase family protein; structur | 99.74 | |
| 1yb1_A | 272 | 17-beta-hydroxysteroid dehydrogenase type XI; shor | 99.74 | |
| 3k31_A | 296 | Enoyl-(acyl-carrier-protein) reductase; ssgcid, NI | 99.74 | |
| 3kzv_A | 254 | Uncharacterized oxidoreductase YIR035C; cytoplasmi | 99.74 | |
| 1yde_A | 270 | Retinal dehydrogenase/reductase 3; oxidoreductase, | 99.73 | |
| 3qlj_A | 322 | Short chain dehydrogenase; structural genomics, se | 99.73 | |
| 2ehd_A | 234 | Oxidoreductase, oxidoreductase, short-chain dehydr | 99.73 | |
| 4fc7_A | 277 | Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossman | 99.73 | |
| 3t7c_A | 299 | Carveol dehydrogenase; structural genomics, seattl | 99.73 | |
| 2nm0_A | 253 | Probable 3-oxacyl-(acyl-carrier-protein) reductas; | 99.73 | |
| 3rkr_A | 262 | Short chain oxidoreductase; rossmann fold; HET: NA | 99.73 | |
| 2a4k_A | 263 | 3-oxoacyl-[acyl carrier protein] reductase; reduct | 99.73 | |
| 2gdz_A | 267 | NAD+-dependent 15-hydroxyprostaglandin dehydrogen; | 99.73 | |
| 2ekp_A | 239 | 2-deoxy-D-gluconate 3-dehydrogenase; structural ge | 99.73 | |
| 3icc_A | 255 | Putative 3-oxoacyl-(acyl carrier protein) reducta; | 99.73 | |
| 1fjh_A | 257 | 3alpha-hydroxysteroid dehydrogenase/carbonyl reduc | 99.73 | |
| 3orf_A | 251 | Dihydropteridine reductase; alpha-beta-alpha sandw | 99.73 | |
| 3p19_A | 266 | BFPVVD8, putative blue fluorescent protein; rossma | 99.72 | |
| 3h7a_A | 252 | Short chain dehydrogenase; oxidoreductase, PSI-2, | 99.72 | |
| 1dhr_A | 241 | Dihydropteridine reductase; oxidoreductase(acting | 99.72 | |
| 3e9n_A | 245 | Putative short-chain dehydrogenase/reductase; stru | 99.72 | |
| 4dyv_A | 272 | Short-chain dehydrogenase/reductase SDR; structura | 99.72 | |
| 1xg5_A | 279 | ARPG836; short chain dehydrogenase, human, SGC, st | 99.72 | |
| 3rku_A | 287 | Oxidoreductase YMR226C; substrate fingerprint, sho | 99.72 | |
| 3l6e_A | 235 | Oxidoreductase, short-chain dehydrogenase/reducta; | 99.72 | |
| 2qhx_A | 328 | Pteridine reductase 1; oxidoreductase, short-chain | 99.72 | |
| 3lf2_A | 265 | Short chain oxidoreductase Q9HYA2; SDR, SCOR, ross | 99.71 | |
| 4imr_A | 275 | 3-oxoacyl-(acyl-carrier-protein) reductase; oxidor | 99.71 | |
| 3ppi_A | 281 | 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, de | 99.71 | |
| 3sc4_A | 285 | Short chain dehydrogenase (A0QTM2 homolog); ssgcid | 99.7 | |
| 2x9g_A | 288 | PTR1, pteridine reductase; short chain dehydrogena | 99.7 | |
| 2jah_A | 247 | Clavulanic acid dehydrogenase; short-chain dehydro | 99.7 | |
| 3zv4_A | 281 | CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; ox | 99.7 | |
| 3tfo_A | 264 | Putative 3-oxoacyl-(acyl-carrier-protein) reducta; | 99.7 | |
| 1xu9_A | 286 | Corticosteroid 11-beta-dehydrogenase, isozyme 1; h | 99.69 | |
| 4dry_A | 281 | 3-oxoacyl-[acyl-carrier-protein] reductase; struct | 99.69 | |
| 3gdg_A | 267 | Probable NADP-dependent mannitol dehydrogenase; ro | 99.69 | |
| 3i1j_A | 247 | Oxidoreductase, short chain dehydrogenase/reducta; | 99.69 | |
| 3nyw_A | 250 | Putative oxidoreductase; fatty acid synthesis,3-ox | 99.69 | |
| 3guy_A | 230 | Short-chain dehydrogenase/reductase SDR; structura | 99.69 | |
| 1e7w_A | 291 | Pteridine reductase; dihydrofolate reductase, shor | 99.68 | |
| 3uce_A | 223 | Dehydrogenase; rossmann fold, oxidoreductase; HET: | 99.68 | |
| 1zem_A | 262 | Xylitol dehydrogenase; rossmann fold, dinucleotide | 99.68 | |
| 2fr1_A | 486 | Erythromycin synthase, eryai; short chain dehydrog | 99.67 | |
| 3o26_A | 311 | Salutaridine reductase; short chain dehydrogenase/ | 99.67 | |
| 3kvo_A | 346 | Hydroxysteroid dehydrogenase-like protein 2; HSDL2 | 99.66 | |
| 3e03_A | 274 | Short chain dehydrogenase; structural genomics, PS | 99.66 | |
| 2z5l_A | 511 | Tylkr1, tylactone synthase starter module and modu | 99.66 | |
| 3asu_A | 248 | Short-chain dehydrogenase/reductase SDR; SDR famil | 99.66 | |
| 1jtv_A | 327 | 17 beta-hydroxysteroid dehydrogenase type 1; stero | 99.64 | |
| 4gkb_A | 258 | 3-oxoacyl-[acyl-carrier protein] reductase; putati | 99.64 | |
| 2nwq_A | 272 | Probable short-chain dehydrogenase; oxidoreductase | 99.64 | |
| 4b79_A | 242 | PA4098, probable short-chain dehydrogenase; oxidor | 99.64 | |
| 1zmt_A | 254 | Haloalcohol dehalogenase HHEC; halohydrin dehaloge | 99.63 | |
| 3u0b_A | 454 | Oxidoreductase, short chain dehydrogenase/reducta | 99.62 | |
| 1oaa_A | 259 | Sepiapterin reductase; tetrahydrobiopterin, oxidor | 99.61 | |
| 1gz6_A | 319 | Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MF | 99.6 | |
| 2qq5_A | 260 | DHRS1, dehydrogenase/reductase SDR family member 1 | 99.6 | |
| 2h7i_A | 269 | Enoyl-[acyl-carrier-protein] reductase [NADH]; oxi | 99.6 | |
| 4fn4_A | 254 | Short chain dehydrogenase; NADH-binding, rossmann | 99.59 | |
| 4fgs_A | 273 | Probable dehydrogenase protein; PSI-biology, nysgr | 99.59 | |
| 4g81_D | 255 | Putative hexonate dehydrogenase; enzyme function i | 99.59 | |
| 3ged_A | 247 | Short-chain dehydrogenase/reductase SDR; SCOR, ros | 99.57 | |
| 1zmo_A | 244 | Halohydrin dehalogenase; haloalcohol dehalogenase, | 99.57 | |
| 4fs3_A | 256 | Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; | 99.56 | |
| 3mje_A | 496 | AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1. | 99.55 | |
| 4hp8_A | 247 | 2-deoxy-D-gluconate 3-dehydrogenase; enzyme functi | 99.54 | |
| 4h15_A | 261 | Short chain alcohol dehydrogenase-related dehydro; | 99.54 | |
| 1d7o_A | 297 | Enoyl-[acyl-carrier protein] reductase (NADH) PRE; | 99.52 | |
| 3qp9_A | 525 | Type I polyketide synthase pikaii; rossmann fold, | 99.51 | |
| 1y7t_A | 327 | Malate dehydrogenase; NAD-dependent-MDH-NADPH comp | 99.48 | |
| 3oml_A | 613 | GH14720P, peroxisomal multifunctional enzyme type | 99.43 | |
| 2ptg_A | 319 | Enoyl-acyl carrier reductase; apicomplexa, enoyl ( | 99.38 | |
| 3lt0_A | 329 | Enoyl-ACP reductase; triclosan, triclosan variant, | 99.34 | |
| 2o2s_A | 315 | Enoyl-acyl carrier reductase; enoyl reductase, tri | 99.29 | |
| 3slk_A | 795 | Polyketide synthase extender module 2; rossmann fo | 99.22 | |
| 2et6_A | 604 | (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox | 99.17 | |
| 2uv9_A | 1878 | Fatty acid synthase alpha subunits; fungal, dehydr | 99.15 | |
| 2et6_A | 604 | (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox | 99.12 | |
| 2uv8_A | 1887 | Fatty acid synthase subunit alpha (FAS2); fatty ac | 99.12 | |
| 3zu3_A | 405 | Putative reductase YPO4104/Y4119/YP_4011; oxidored | 99.08 | |
| 2pff_A | 1688 | Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl | 99.08 | |
| 3s8m_A | 422 | Enoyl-ACP reductase; rossmann fold, oxidoreductase | 99.06 | |
| 4eue_A | 418 | Putative reductase CA_C0462; TER, biofuel, synthet | 98.99 | |
| 2vz8_A | 2512 | Fatty acid synthase; transferase, phosphopantethei | 98.88 | |
| 3ic5_A | 118 | Putative saccharopine dehydrogenase; structural ge | 98.45 | |
| 1hye_A | 313 | L-lactate/malate dehydrogenase; nucleotide binding | 98.43 | |
| 1smk_A | 326 | Malate dehydrogenase, glyoxysomal; tricarboxylic c | 98.41 | |
| 3zen_D | 3089 | Fatty acid synthase; transferase, mycolic acid bio | 98.41 | |
| 1b8p_A | 329 | Protein (malate dehydrogenase); oxidoreductase; 1. | 98.35 | |
| 1o6z_A | 303 | MDH, malate dehydrogenase; halophilic, ION-binding | 98.33 | |
| 1lu9_A | 287 | Methylene tetrahydromethanopterin dehydrogenase; a | 98.18 | |
| 1ff9_A | 450 | Saccharopine reductase; lysine biosynthesis, alpha | 97.97 | |
| 2gk4_A | 232 | Conserved hypothetical protein; alpha-beta-alpha s | 97.89 | |
| 4ggo_A | 401 | Trans-2-enoyl-COA reductase; rossmann fold, oxidor | 97.82 | |
| 2hmt_A | 144 | YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane | 97.64 | |
| 1u7z_A | 226 | Coenzyme A biosynthesis bifunctional protein coabc | 97.63 | |
| 1lss_A | 140 | TRK system potassium uptake protein TRKA homolog; | 97.58 | |
| 1mld_A | 314 | Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D | 97.5 | |
| 3llv_A | 141 | Exopolyphosphatase-related protein; NAD(P)-binding | 97.42 | |
| 2axq_A | 467 | Saccharopine dehydrogenase; rossmann fold variant, | 97.41 | |
| 5mdh_A | 333 | Malate dehydrogenase; oxidoreductase, (NAD(A)-CHOH | 97.34 | |
| 4ina_A | 405 | Saccharopine dehydrogenase; structural genomics, P | 97.25 | |
| 1id1_A | 153 | Putative potassium channel protein; RCK domain, E. | 97.21 | |
| 3fi9_A | 343 | Malate dehydrogenase; structural genomics, oxidore | 97.11 | |
| 3abi_A | 365 | Putative uncharacterized protein PH1688; L-lysine | 97.06 | |
| 2g1u_A | 155 | Hypothetical protein TM1088A; structural genomics, | 97.04 | |
| 1pqw_A | 198 | Polyketide synthase; rossmann fold, dimer, structu | 96.69 | |
| 3tnl_A | 315 | Shikimate dehydrogenase; structural genomics, cent | 96.56 | |
| 3c85_A | 183 | Putative glutathione-regulated potassium-efflux S | 96.47 | |
| 3hhp_A | 312 | Malate dehydrogenase; MDH, citric acid cycle, TCA | 96.2 | |
| 1v3u_A | 333 | Leukotriene B4 12- hydroxydehydrogenase/prostaglan | 96.15 | |
| 2hcy_A | 347 | Alcohol dehydrogenase 1; tetramer of asymmetric di | 96.13 | |
| 1qor_A | 327 | Quinone oxidoreductase; HET: NAP; 2.20A {Escherich | 96.13 | |
| 1dih_A | 273 | Dihydrodipicolinate reductase; oxidoreductase; HET | 96.01 | |
| 1wly_A | 333 | CAAR, 2-haloacrylate reductase; NADPH-dependent ox | 95.95 | |
| 3t4e_A | 312 | Quinate/shikimate dehydrogenase; structural genomi | 95.87 | |
| 3l4b_C | 218 | TRKA K+ channel protien TM1088B; potassium channel | 95.86 | |
| 2j8z_A | 354 | Quinone oxidoreductase; medium-chain dehydrogenase | 95.85 | |
| 1yb5_A | 351 | Quinone oxidoreductase; medium-chain dehydrogenase | 95.83 | |
| 1jay_A | 212 | Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossma | 95.72 | |
| 2z2v_A | 365 | Hypothetical protein PH1688; L-lysine dehydrogenas | 95.69 | |
| 4eye_A | 342 | Probable oxidoreductase; structural genomics, niai | 95.6 | |
| 1p9o_A | 313 | Phosphopantothenoylcysteine synthetase; ligase; 2. | 95.6 | |
| 1jw9_B | 249 | Molybdopterin biosynthesis MOEB protein; MOEB: mod | 95.52 | |
| 1jvb_A | 347 | NAD(H)-dependent alcohol dehydrogenase; archaeon, | 95.45 | |
| 3jyn_A | 325 | Quinone oxidoreductase; rossmann fold, protein-NAD | 95.44 | |
| 3gms_A | 340 | Putative NADPH:quinone reductase; structural genom | 95.44 | |
| 2hjs_A | 340 | USG-1 protein homolog; aspartate-semialdehyde dehy | 95.42 | |
| 2zb4_A | 357 | Prostaglandin reductase 2; rossmann fold, alternat | 95.36 | |
| 4b7c_A | 336 | Probable oxidoreductase; NADP cofactor, rossmann f | 95.35 | |
| 2eez_A | 369 | Alanine dehydrogenase; TTHA0216, structural genomi | 95.33 | |
| 2nqt_A | 352 | N-acetyl-gamma-glutamyl-phosphate reductase; apopr | 95.15 | |
| 3qwb_A | 334 | Probable quinone oxidoreductase; rossmann fold, qu | 95.14 | |
| 4dup_A | 353 | Quinone oxidoreductase; PSI-biology, structural ge | 95.08 | |
| 2eih_A | 343 | Alcohol dehydrogenase; zinc ION binding protein, s | 95.06 | |
| 3fwz_A | 140 | Inner membrane protein YBAL; TRKA-N domain, E.coli | 95.06 | |
| 1zud_1 | 251 | Adenylyltransferase THIF; thiamin, thiazole, prote | 94.93 | |
| 3vku_A | 326 | L-LDH, L-lactate dehydrogenase; rossmann fold, NAD | 94.85 | |
| 3pqe_A | 326 | L-LDH, L-lactate dehydrogenase; FBP, oxidoreductas | 94.85 | |
| 3nep_X | 314 | Malate dehydrogenase; halophIle, molecular adpatat | 94.78 | |
| 2j3h_A | 345 | NADP-dependent oxidoreductase P1; double bond redu | 94.77 | |
| 1iz0_A | 302 | Quinone oxidoreductase; APO-enzyme, riken structur | 94.64 | |
| 2c0c_A | 362 | Zinc binding alcohol dehydrogenase, domain contain | 94.43 | |
| 4h7p_A | 345 | Malate dehydrogenase; ssgcid, structural G seattle | 94.37 | |
| 3p7m_A | 321 | Malate dehydrogenase; putative dehydrogenase, enzy | 94.3 | |
| 2cdc_A | 366 | Glucose dehydrogenase glucose 1-dehydrogenase, DHG | 94.29 | |
| 1nyt_A | 271 | Shikimate 5-dehydrogenase; alpha/beta domains, WID | 94.24 | |
| 3pi7_A | 349 | NADH oxidoreductase; groes-like fold, NAD(P)-bindi | 94.22 | |
| 2ph5_A | 480 | Homospermidine synthase; alpha-beta protein, struc | 94.2 | |
| 2ozp_A | 345 | N-acetyl-gamma-glutamyl-phosphate reductase; amino | 94.05 | |
| 3pwk_A | 366 | Aspartate-semialdehyde dehydrogenase; NADP binding | 93.96 | |
| 3jyo_A | 283 | Quinate/shikimate dehydrogenase; enzyme-cofactor c | 93.96 | |
| 2x0j_A | 294 | Malate dehydrogenase; oxidoreductase, hyperthermop | 93.86 | |
| 1y6j_A | 318 | L-lactate dehydrogenase; southeast collaboratory f | 93.8 | |
| 4f3y_A | 272 | DHPR, dihydrodipicolinate reductase; structural ge | 93.76 | |
| 1xyg_A | 359 | Putative N-acetyl-gamma-glutamyl-phosphate reduct; | 93.76 | |
| 3tz6_A | 344 | Aspartate-semialdehyde dehydrogenase; asadh, ASD, | 93.57 | |
| 2o7s_A | 523 | DHQ-SDH PR, bifunctional 3-dehydroquinate dehydrat | 93.53 | |
| 2aef_A | 234 | Calcium-gated potassium channel MTHK; rossmann fol | 93.48 | |
| 3gaz_A | 343 | Alcohol dehydrogenase superfamily protein; oxidore | 93.37 | |
| 3h8v_A | 292 | Ubiquitin-like modifier-activating enzyme 5; rossm | 93.2 | |
| 3tl2_A | 315 | Malate dehydrogenase; center for structural genomi | 93.2 | |
| 3uw3_A | 377 | Aspartate-semialdehyde dehydrogenase; structural g | 93.18 | |
| 1y8q_B | 640 | Anthracycline-, ubiquitin-like 2 activating enzyme | 93.13 | |
| 1rjw_A | 339 | ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD | 93.07 | |
| 2xxj_A | 310 | L-LDH, L-lactate dehydrogenase; oxidoreductase, hy | 93.05 | |
| 2r00_A | 336 | Aspartate-semialdehyde dehydrogenase; conformation | 93.03 | |
| 4a0s_A | 447 | Octenoyl-COA reductase/carboxylase; oxidoreductase | 92.87 | |
| 1oju_A | 294 | MDH, malate dehydrogenase; hyperthermophilic, oxid | 92.77 | |
| 3gvi_A | 324 | Malate dehydrogenase; NAD, oxidoreductase, tricarb | 92.74 | |
| 3pzr_A | 370 | Aspartate-semialdehyde dehydrogenase; NADP, oxidor | 92.63 | |
| 1pjc_A | 361 | Protein (L-alanine dehydrogenase); oxidoreductase, | 92.63 | |
| 2egg_A | 297 | AROE, shikimate 5-dehydrogenase; dimer, X-RAY diff | 92.62 | |
| 2vn8_A | 375 | Reticulon-4-interacting protein 1; mitochondrion, | 92.56 | |
| 3fbg_A | 346 | Putative arginate lyase; structural genomics, unkn | 92.53 | |
| 1piw_A | 360 | Hypothetical zinc-type alcohol dehydrogenase- like | 92.44 | |
| 7mdh_A | 375 | Protein (malate dehydrogenase); chloroplastic mala | 92.31 | |
| 4dpl_A | 359 | Malonyl-COA/succinyl-COA reductase; dinucleotide b | 92.27 | |
| 4dpk_A | 359 | Malonyl-COA/succinyl-COA reductase; dinucleotide b | 92.27 | |
| 3h5n_A | 353 | MCCB protein; ubiquitin-activating enzyme, microci | 92.03 | |
| 2zqz_A | 326 | L-LDH, L-lactate dehydrogenase; oxidoreductase, ro | 92.0 | |
| 1y8q_A | 346 | Ubiquitin-like 1 activating enzyme E1A; SUMO, hete | 91.94 | |
| 3d0o_A | 317 | L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, gly | 91.92 | |
| 3oj0_A | 144 | Glutr, glutamyl-tRNA reductase; structural genomic | 91.9 | |
| 3l9w_A | 413 | Glutathione-regulated potassium-efflux system Pro | 91.87 | |
| 3krt_A | 456 | Crotonyl COA reductase; structural genomics, prote | 91.83 | |
| 3dr3_A | 337 | N-acetyl-gamma-glutamyl-phosphate reductase; csgid | 91.75 | |
| 4aj2_A | 331 | L-lactate dehydrogenase A chain; oxidoreductase-in | 91.64 | |
| 1nvt_A | 287 | Shikimate 5'-dehydrogenase; structural genomics, P | 91.63 | |
| 1ur5_A | 309 | Malate dehydrogenase; oxidoreductase, tricarboxyli | 91.58 | |
| 1ez4_A | 318 | Lactate dehydrogenase; rossmann fold, oxidoreducta | 91.58 | |
| 2d8a_A | 348 | PH0655, probable L-threonine 3-dehydrogenase; pyro | 91.5 | |
| 1yqd_A | 366 | Sinapyl alcohol dehydrogenase; lignin, monolignol, | 91.1 | |
| 3tqh_A | 321 | Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella | 91.06 | |
| 1t4b_A | 367 | Aspartate-semialdehyde dehydrogenase; asadh, HOSR, | 90.84 | |
| 1uuf_A | 369 | YAHK, zinc-type alcohol dehydrogenase-like protein | 90.5 | |
| 3ldh_A | 330 | Lactate dehydrogenase; oxidoreductase, CHOH donor, | 90.4 | |
| 3uog_A | 363 | Alcohol dehydrogenase; structural genomics, protei | 90.15 | |
| 1pzg_A | 331 | LDH, lactate dehydrogenase; apicomplexa, APAD, tet | 89.97 | |
| 3gqv_A | 371 | Enoyl reductase; medium-chain reductase (MDR super | 89.75 | |
| 1gu7_A | 364 | Enoyl-[acyl-carrier-protein] reductase [NADPH, B-s | 89.72 | |
| 1vkn_A | 351 | N-acetyl-gamma-glutamyl-phosphate reductase; TM178 | 89.69 | |
| 1xa0_A | 328 | Putative NADPH dependent oxidoreductases; structur | 89.61 | |
| 3m6i_A | 363 | L-arabinitol 4-dehydrogenase; medium chain dehydro | 89.55 | |
| 2b5w_A | 357 | Glucose dehydrogenase; nucleotide binding motif, o | 89.37 | |
| 3don_A | 277 | Shikimate dehydrogenase; alpha-beta structure, ros | 88.99 | |
| 3rui_A | 340 | Ubiquitin-like modifier-activating enzyme ATG7; au | 88.93 | |
| 1guz_A | 310 | Malate dehydrogenase; oxidoreductase, tricarboxyli | 88.81 | |
| 3gxh_A | 157 | Putative phosphatase (DUF442); YP_001181608.1, str | 88.8 | |
| 2h6e_A | 344 | ADH-4, D-arabinose 1-dehydrogenase; rossman fold, | 88.62 | |
| 1e3j_A | 352 | NADP(H)-dependent ketose reductase; oxidoreductase | 88.53 | |
| 2cf5_A | 357 | Atccad5, CAD, cinnamyl alcohol dehydrogenase; lign | 88.29 | |
| 1lnq_A | 336 | MTHK channels, potassium channel related protein; | 88.1 | |
| 2vhw_A | 377 | Alanine dehydrogenase; NAD, secreted, oxidoreducta | 88.09 | |
| 4ej6_A | 370 | Putative zinc-binding dehydrogenase; structural ge | 88.07 | |
| 3vh1_A | 598 | Ubiquitin-like modifier-activating enzyme ATG7; au | 88.01 | |
| 3p2o_A | 285 | Bifunctional protein fold; structural genomics, ce | 87.99 | |
| 1a5z_A | 319 | L-lactate dehydrogenase; oxidoreductase, glycolysi | 87.87 | |
| 3two_A | 348 | Mannitol dehydrogenase; cinnamyl-alcohol dehydroge | 87.82 | |
| 3s2e_A | 340 | Zinc-containing alcohol dehydrogenase superfamily; | 87.79 | |
| 3ip1_A | 404 | Alcohol dehydrogenase, zinc-containing; structural | 87.54 | |
| 1tt5_A | 531 | APPBP1, amyloid protein-binding protein 1; cell cy | 87.29 | |
| 3nx4_A | 324 | Putative oxidoreductase; csgid, structural genomic | 87.04 | |
| 1gpj_A | 404 | Glutamyl-tRNA reductase; tRNA-dependent tetrapyrro | 86.85 | |
| 1zsy_A | 357 | Mitochondrial 2-enoyl thioester reductase; medium- | 86.75 | |
| 1p77_A | 272 | Shikimate 5-dehydrogenase; NADPH, oxidoreductase; | 86.58 | |
| 3iup_A | 379 | Putative NADPH:quinone oxidoreductase; YP_296108.1 | 86.38 | |
| 2v6b_A | 304 | L-LDH, L-lactate dehydrogenase; oxidoreductase, ra | 86.1 | |
| 4dvj_A | 363 | Putative zinc-dependent alcohol dehydrogenase Pro; | 85.81 | |
| 3dfz_A | 223 | SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase | 85.76 | |
| 1y81_A | 138 | Conserved hypothetical protein; hyperthermophIle, | 85.75 | |
| 1ys4_A | 354 | Aspartate-semialdehyde dehydrogenase; oxidoreducta | 85.67 | |
| 3l07_A | 285 | Bifunctional protein fold; structural genomics, ID | 85.53 | |
| 3jv7_A | 345 | ADH-A; dehydrogenase, nucleotide binding, rossmann | 85.41 | |
| 2dq4_A | 343 | L-threonine 3-dehydrogenase; NAD-dependent, oxidor | 85.33 | |
| 1h2b_A | 359 | Alcohol dehydrogenase; oxidoreductase, archaea, hy | 85.32 | |
| 2i6t_A | 303 | Ubiquitin-conjugating enzyme E2-like isoform A; L- | 85.29 | |
| 1tt5_B | 434 | Ubiquitin-activating enzyme E1C isoform 1; cell cy | 85.25 | |
| 1ldn_A | 316 | L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NA | 84.96 | |
| 1lld_A | 319 | L-lactate dehydrogenase; oxidoreductase(CHOH (D)-N | 84.92 | |
| 2fzw_A | 373 | Alcohol dehydrogenase class III CHI chain; S-nitro | 84.9 | |
| 3o8q_A | 281 | Shikimate 5-dehydrogenase I alpha; structural geno | 84.88 | |
| 3hsk_A | 381 | Aspartate-semialdehyde dehydrogenase; candida albi | 84.82 | |
| 4g65_A | 461 | TRK system potassium uptake protein TRKA; structur | 84.79 | |
| 4gsl_A | 615 | Ubiquitin-like modifier-activating enzyme ATG7; ub | 84.61 | |
| 1vj0_A | 380 | Alcohol dehydrogenase, zinc-containing; TM0436, st | 84.5 | |
| 1p9l_A | 245 | Dihydrodipicolinate reductase; oxidoreductase, lys | 84.31 | |
| 4a5o_A | 286 | Bifunctional protein fold; oxidoreductase, hydrola | 84.28 | |
| 3pwz_A | 272 | Shikimate dehydrogenase 3; alpha-beta, oxidoreduct | 84.28 | |
| 3uko_A | 378 | Alcohol dehydrogenase class-3; alcohol dehydrogena | 84.23 | |
| 3lk7_A | 451 | UDP-N-acetylmuramoylalanine--D-glutamate ligase; a | 84.18 | |
| 1f8f_A | 371 | Benzyl alcohol dehydrogenase; rossmann fold, oxido | 84.13 | |
| 2d4a_B | 308 | Malate dehydrogenase; archaea, hyperthermophIle, o | 84.07 | |
| 2yv3_A | 331 | Aspartate-semialdehyde dehydrogenase; aspartate pa | 84.01 | |
| 1tt7_A | 330 | YHFP; alcohol dehydrogenase, Zn-dependent, NAD, st | 83.41 | |
| 2dph_A | 398 | Formaldehyde dismutase; dismutation of aldehydes, | 83.35 | |
| 4a26_A | 300 | Putative C-1-tetrahydrofolate synthase, cytoplasm; | 83.16 | |
| 1e3i_A | 376 | Alcohol dehydrogenase, class II; HET: NAD; 2.08A { | 83.07 | |
| 2duw_A | 145 | Putative COA-binding protein; ligand binding prote | 82.93 | |
| 3ijp_A | 288 | DHPR, dihydrodipicolinate reductase; ssgcid, SBRI, | 82.91 | |
| 1p0f_A | 373 | NADP-dependent alcohol dehydrogenase; ADH topology | 82.83 | |
| 1cdo_A | 374 | Alcohol dehydrogenase; oxidoreductase, oxidoreduct | 82.83 | |
| 2jhf_A | 374 | Alcohol dehydrogenase E chain; oxidoreductase, met | 82.63 | |
| 3ngx_A | 276 | Bifunctional protein fold; methylenetetrahydrofola | 82.51 | |
| 1pl8_A | 356 | Human sorbitol dehydrogenase; NAD, oxidoreductase; | 82.2 | |
| 1hyh_A | 309 | L-hicdh, L-2-hydroxyisocaproate dehydrogenase; L-2 | 82.2 | |
| 3fpc_A | 352 | NADP-dependent alcohol dehydrogenase; oxydoreducta | 81.9 | |
| 1l7d_A | 384 | Nicotinamide nucleotide transhydrogenase, subunit | 81.87 | |
| 3phh_A | 269 | Shikimate dehydrogenase; shikimate pathway, helico | 81.84 | |
| 2ewd_A | 317 | Lactate dehydrogenase,; protein-substrate_cofactor | 81.48 |
| >3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.1e-31 Score=271.27 Aligned_cols=261 Identities=18% Similarity=0.222 Sum_probs=196.3
Q ss_pred hcCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccH-HHHHHHHHhhhhhHHHHHhhhccccccccCCce
Q 010075 9 FLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSA-ALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKI 87 (519)
Q Consensus 9 ~~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~-~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v 87 (519)
.+++|+|||||||||||++|+++|++.| .+|+++.|....... .+.+. ...+ .....++
T Consensus 22 ~~~~~~vlVtGatG~iG~~l~~~L~~~g---~~V~~~~r~~~~~~~~~~~~~-------------~~~~----~~~~~~~ 81 (351)
T 3ruf_A 22 IFSPKTWLITGVAGFIGSNLLEKLLKLN---QVVIGLDNFSTGHQYNLDEVK-------------TLVS----TEQWSRF 81 (351)
T ss_dssp HHSCCEEEEETTTSHHHHHHHHHHHHTT---CEEEEEECCSSCCHHHHHHHH-------------HTSC----HHHHTTE
T ss_pred CCCCCeEEEECCCcHHHHHHHHHHHHCC---CEEEEEeCCCCCchhhhhhhh-------------hccc----cccCCce
Confidence 4678999999999999999999999998 688999997654322 12221 1000 0001578
Q ss_pred EEEeccCCCCCCCCChhhhHHHHhcCccEEEEcCccCCcc---ccHHHHHHHhHHHHHHHHHHHHhccCCceEEEEecce
Q 010075 88 TFVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKFD---ERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAY 164 (519)
Q Consensus 88 ~~v~gDl~~~~lgls~~~~~~~l~~~vdiViH~Aa~v~f~---~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V~vSTa~ 164 (519)
+++.+|+++ .+....+++++|+|||+||..... ++....+++|+.|+.+++++|++. ++++|||+||+.
T Consensus 82 ~~~~~Dl~d-------~~~~~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~-~~~~~v~~SS~~ 153 (351)
T 3ruf_A 82 CFIEGDIRD-------LTTCEQVMKGVDHVLHQAALGSVPRSIVDPITTNATNITGFLNILHAAKNA-QVQSFTYAASSS 153 (351)
T ss_dssp EEEECCTTC-------HHHHHHHTTTCSEEEECCCCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHT-TCSEEEEEEEGG
T ss_pred EEEEccCCC-------HHHHHHHhcCCCEEEECCccCCcchhhhCHHHHHHHHHHHHHHHHHHHHHc-CCCEEEEEecHH
Confidence 999999994 444557888999999999986543 456678999999999999999996 789999999999
Q ss_pred eecCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcHHHHHHHHHHHHHHH
Q 010075 165 VAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLMQQ 244 (519)
Q Consensus 165 v~~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~Y~~sK~~aE~lv~~ 244 (519)
+|+...+ .++.|+.+. .+.+.|+.||+.+|++++.
T Consensus 154 vyg~~~~----~~~~E~~~~-----------------------------------------~p~~~Y~~sK~~~E~~~~~ 188 (351)
T 3ruf_A 154 TYGDHPA----LPKVEENIG-----------------------------------------NPLSPYAVTKYVNEIYAQV 188 (351)
T ss_dssp GGTTCCC----SSBCTTCCC-----------------------------------------CCCSHHHHHHHHHHHHHHH
T ss_pred hcCCCCC----CCCccCCCC-----------------------------------------CCCChhHHHHHHHHHHHHH
Confidence 9986542 223222221 4568999999999999998
Q ss_pred h--hcCCcEEEEecCccccCCCCCCCcccccccccHHHHHHhhcCCceeeccCCCceeeeeeHHHHHHHHHHHHHHhccC
Q 010075 245 S--KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMIVAMVAHAKQ 322 (519)
Q Consensus 245 ~--~~~lp~~IvRPs~V~g~~~~p~~gw~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~d~vpVDdva~aii~a~~~~~~~ 322 (519)
+ ..+++++|+||+.|||+...+...+. .....++..+..|....++++++..+++|||||+|++++.++.....
T Consensus 189 ~~~~~g~~~~ilRp~~v~G~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~g~g~~~~~~i~v~Dva~a~~~~~~~~~~- 264 (351)
T 3ruf_A 189 YARTYGFKTIGLRYFNVFGRRQDPNGAYA---AVIPKWTAAMLKGDDVYINGDGETSRDFCYIDNVIQMNILSALAKDS- 264 (351)
T ss_dssp HHHHHCCCCEEEEECSEESTTCCCCSTTC---CHHHHHHHHHHHTCCCEEESSSCCEECCEEHHHHHHHHHHHHTCCGG-
T ss_pred HHHHhCCCEEEEeeCceeCcCCCCCcchh---hHHHHHHHHHHcCCCcEEeCCCCeEEeeEEHHHHHHHHHHHHhhccc-
Confidence 7 45899999999999999875432211 23345666777888778889999999999999999999998864211
Q ss_pred CCCCcEEEecCCCCCchhHHHHHHH
Q 010075 323 PSDANIYHVGSSLRNPVTLGLQVAN 347 (519)
Q Consensus 323 ~~~~~iyni~s~~~~~i~~~~~~~~ 347 (519)
..+++||++++...++..+...+.
T Consensus 265 -~~~~~~ni~~~~~~s~~e~~~~i~ 288 (351)
T 3ruf_A 265 -AKDNIYNVAVGDRTTLNELSGYIY 288 (351)
T ss_dssp -GCSEEEEESCSCCEEHHHHHHHHH
T ss_pred -cCCCEEEeCCCCcccHHHHHHHHH
Confidence 136899999997655444444443
|
| >4egb_A DTDP-glucose 4,6-dehydratase; rhamnose pathway, center for structural genomics of infectio diseases, csgid, niaid; HET: NAD SUC; 3.00A {Bacillus anthracis} | Back alignment and structure |
|---|
Probab=99.98 E-value=7e-31 Score=268.09 Aligned_cols=253 Identities=21% Similarity=0.259 Sum_probs=187.8
Q ss_pred cCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 010075 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (519)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (519)
+++|+|||||||||||++|++.|++.|+++ +|+++.|....... +++. .. ....++++
T Consensus 22 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~~-~v~~~~~~~~~~~~-~~l~-------------~~-------~~~~~~~~ 79 (346)
T 4egb_A 22 SNAMNILVTGGAGFIGSNFVHYMLQSYETY-KIINFDALTYSGNL-NNVK-------------SI-------QDHPNYYF 79 (346)
T ss_dssp --CEEEEEETTTSHHHHHHHHHHHHHCTTE-EEEEEECCCTTCCG-GGGT-------------TT-------TTCTTEEE
T ss_pred cCCCeEEEECCccHHHHHHHHHHHhhCCCc-EEEEEeccccccch-hhhh-------------hh-------ccCCCeEE
Confidence 467899999999999999999999998764 78888876532211 1110 00 01257999
Q ss_pred EeccCCCCCCCCChhhhHHHHhcC--ccEEEEcCccCCcc---ccHHHHHHHhHHHHHHHHHHHHhccCCceEEEEecce
Q 010075 90 VPGDISSEDLGLKDSNLKEELWNE--LDIMVNSAAITKFD---ERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAY 164 (519)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~~~--vdiViH~Aa~v~f~---~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V~vSTa~ 164 (519)
+.+|+++ .+....++++ +|+|||+||..... ++....+++|+.|+.+++++|++. ++++|||+||++
T Consensus 80 ~~~Dl~d-------~~~~~~~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~-~~~~~v~~SS~~ 151 (346)
T 4egb_A 80 VKGEIQN-------GELLEHVIKERDVQVIVNFAAESHVDRSIENPIPFYDTNVIGTVTLLELVKKY-PHIKLVQVSTDE 151 (346)
T ss_dssp EECCTTC-------HHHHHHHHHHHTCCEEEECCCCC---------CHHHHHHTHHHHHHHHHHHHS-TTSEEEEEEEGG
T ss_pred EEcCCCC-------HHHHHHHHhhcCCCEEEECCcccchhhhhhCHHHHHHHHHHHHHHHHHHHHhc-CCCEEEEeCchH
Confidence 9999995 3444566665 99999999987654 566778999999999999999997 889999999999
Q ss_pred eecCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcHHHHHHHHHHHHHHH
Q 010075 165 VAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLMQQ 244 (519)
Q Consensus 165 v~~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~Y~~sK~~aE~lv~~ 244 (519)
+|+.... ..++.|+.+. .+.+.|+.||+.+|++++.
T Consensus 152 vy~~~~~---~~~~~E~~~~-----------------------------------------~p~~~Y~~sK~~~E~~~~~ 187 (346)
T 4egb_A 152 VYGSLGK---TGRFTEETPL-----------------------------------------APNSPYSSSKASADMIALA 187 (346)
T ss_dssp GGCCCCS---SCCBCTTSCC-----------------------------------------CCCSHHHHHHHHHHHHHHH
T ss_pred HhCCCCc---CCCcCCCCCC-----------------------------------------CCCChhHHHHHHHHHHHHH
Confidence 9986521 1223332222 4568899999999999998
Q ss_pred h--hcCCcEEEEecCccccCCCCCCCcccccccccHHHHHHhhcCCceeeccCCCceeeeeeHHHHHHHHHHHHHHhccC
Q 010075 245 S--KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMIVAMVAHAKQ 322 (519)
Q Consensus 245 ~--~~~lp~~IvRPs~V~g~~~~p~~gw~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~d~vpVDdva~aii~a~~~~~~~ 322 (519)
+ ..+++++++||+.|||+...+. .....++..+..|....++++++..+++|||+|+|++++.++....
T Consensus 188 ~~~~~g~~~~ilRp~~v~G~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~~~~~~-- 258 (346)
T 4egb_A 188 YYKTYQLPVIVTRCSNNYGPYQYPE-------KLIPLMVTNALEGKKLPLYGDGLNVRDWLHVTDHCSAIDVVLHKGR-- 258 (346)
T ss_dssp HHHHHCCCEEEEEECEEESTTCCTT-------SHHHHHHHHHHTTCCCEEETTSCCEECEEEHHHHHHHHHHHHHHCC--
T ss_pred HHHHhCCCEEEEeecceeCcCCCcc-------chHHHHHHHHHcCCCceeeCCCCeEEeeEEHHHHHHHHHHHHhcCC--
Confidence 7 3589999999999999876431 2344566777788777778999999999999999999999997543
Q ss_pred CCCCcEEEecCCCCCchhHHHHHHH
Q 010075 323 PSDANIYHVGSSLRNPVTLGLQVAN 347 (519)
Q Consensus 323 ~~~~~iyni~s~~~~~i~~~~~~~~ 347 (519)
.+++||++++...++..+...+.
T Consensus 259 --~g~~~~i~~~~~~s~~e~~~~i~ 281 (346)
T 4egb_A 259 --VGEVYNIGGNNEKTNVEVVEQII 281 (346)
T ss_dssp --TTCEEEECCSCCEEHHHHHHHHH
T ss_pred --CCCEEEECCCCceeHHHHHHHHH
Confidence 26799999986655444444443
|
| >3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori} | Back alignment and structure |
|---|
Probab=99.97 E-value=1.9e-30 Score=266.97 Aligned_cols=260 Identities=18% Similarity=0.149 Sum_probs=192.1
Q ss_pred hcCCCEEEEeCCccHHHHHHHHHHHH--hCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCc
Q 010075 9 FLENKTILVSGVTGFVAKVFIEKILR--VQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEK 86 (519)
Q Consensus 9 ~~~~k~VlITGaTGFlG~~Lv~~LL~--~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~ 86 (519)
-+++|+|||||||||||++|++.|++ .| .+|+++.|+........+..+. ..........+
T Consensus 7 ~~~~~~vlVTGatG~IG~~l~~~L~~~~~g---~~V~~~~r~~~~~~~~~~~~~~--------------~~~~~~~~~~~ 69 (362)
T 3sxp_A 7 ELENQTILITGGAGFVGSNLAFHFQENHPK---AKVVVLDKFRSNTLFSNNRPSS--------------LGHFKNLIGFK 69 (362)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHHCTT---SEEEEEECCCCC-------CCC--------------CCCGGGGTTCC
T ss_pred hcCCCEEEEECCCCHHHHHHHHHHHhhCCC---CeEEEEECCCccccccccchhh--------------hhhhhhccccC
Confidence 36789999999999999999999999 67 6899999976532111110000 00001112356
Q ss_pred eEEEeccCCCCCCCCChhhhHHHH-hcCccEEEEcCccCCc-cccHHHHHHHhHHHHHHHHHHHHhccCCceEEEEecce
Q 010075 87 ITFVPGDISSEDLGLKDSNLKEEL-WNELDIMVNSAAITKF-DERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAY 164 (519)
Q Consensus 87 v~~v~gDl~~~~lgls~~~~~~~l-~~~vdiViH~Aa~v~f-~~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V~vSTa~ 164 (519)
+.++.+|+++ .+..+.+ ..++|+|||+||.... .++++..+++|+.|+.+++++|++. +.+ |||+||++
T Consensus 70 ~~~~~~Dl~d-------~~~~~~~~~~~~D~vih~A~~~~~~~~~~~~~~~~Nv~gt~~ll~aa~~~-~~~-~V~~SS~~ 140 (362)
T 3sxp_A 70 GEVIAADINN-------PLDLRRLEKLHFDYLFHQAAVSDTTMLNQELVMKTNYQAFLNLLEIARSK-KAK-VIYASSAG 140 (362)
T ss_dssp SEEEECCTTC-------HHHHHHHTTSCCSEEEECCCCCGGGCCCHHHHHHHHTHHHHHHHHHHHHT-TCE-EEEEEEGG
T ss_pred ceEEECCCCC-------HHHHHHhhccCCCEEEECCccCCccccCHHHHHHHHHHHHHHHHHHHHHc-CCc-EEEeCcHH
Confidence 7999999995 3444466 6789999999997764 4678899999999999999999986 666 99999999
Q ss_pred eecCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcHHHHHHHHHHHHHHH
Q 010075 165 VAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLMQQ 244 (519)
Q Consensus 165 v~~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~Y~~sK~~aE~lv~~ 244 (519)
+|+...+.++|. .+. .+.+.|+.||+.+|++++.
T Consensus 141 vyg~~~~~~~E~-----~~~-----------------------------------------~p~~~Y~~sK~~~E~~~~~ 174 (362)
T 3sxp_A 141 VYGNTKAPNVVG-----KNE-----------------------------------------SPENVYGFSKLCMDEFVLS 174 (362)
T ss_dssp GGCSCCSSBCTT-----SCC-----------------------------------------CCSSHHHHHHHHHHHHHHH
T ss_pred HhCCCCCCCCCC-----CCC-----------------------------------------CCCChhHHHHHHHHHHHHH
Confidence 998765433333 221 4578999999999999999
Q ss_pred hhcCCcEEEEecCccccCCCCCCCcccccccccHHHHHHhhcCCceeeccCCCceeeeeeHHHHHHHHHHHHHHhccCCC
Q 010075 245 SKENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMIVAMVAHAKQPS 324 (519)
Q Consensus 245 ~~~~lp~~IvRPs~V~g~~~~p~~gw~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~d~vpVDdva~aii~a~~~~~~~~~ 324 (519)
+...++++++||+.|||+...+...+ ...+..++..+..|....++++++..+++|||+|+|++++.++... .
T Consensus 175 ~~~~~~~~~lR~~~v~Gp~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~ai~~~~~~~--~-- 247 (362)
T 3sxp_A 175 HSNDNVQVGLRYFNVYGPREFYKEKT---ASMVLQLALGAMAFKEVKLFEFGEQLRDFVYIEDVIQANVKAMKAQ--K-- 247 (362)
T ss_dssp TTTTSCEEEEEECSEESTTCGGGGGG---SCHHHHHHHHHHTTSEEECSGGGCCEEECEEHHHHHHHHHHHTTCS--S--
T ss_pred HhccCCEEEEEeCceeCcCCCCCCcc---hhHHHHHHHHHHhCCCeEEECCCCeEEccEEHHHHHHHHHHHHhcC--C--
Confidence 85559999999999999987432211 1234456677778887777888899999999999999999988632 1
Q ss_pred CCcEEEecCCCCCchhHHHHHHHH
Q 010075 325 DANIYHVGSSLRNPVTLGLQVANT 348 (519)
Q Consensus 325 ~~~iyni~s~~~~~i~~~~~~~~~ 348 (519)
.+ +||++++...++..++..+..
T Consensus 248 ~g-~~~i~~~~~~s~~e~~~~i~~ 270 (362)
T 3sxp_A 248 SG-VYNVGYSQARSYNEIVSILKE 270 (362)
T ss_dssp CE-EEEESCSCEEEHHHHHHHHHH
T ss_pred CC-EEEeCCCCCccHHHHHHHHHH
Confidence 24 999999866554444444443
|
| >3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus} | Back alignment and structure |
|---|
Probab=99.97 E-value=2.6e-30 Score=260.20 Aligned_cols=236 Identities=17% Similarity=0.134 Sum_probs=184.8
Q ss_pred CCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEEe
Q 010075 12 NKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVP 91 (519)
Q Consensus 12 ~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v~ 91 (519)
+|+|||||||||||++|++.|++.| .+|+++.|+..... + .+++++.
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~~g---~~V~~~~r~~~~~~----~--------------------------~~~~~~~ 48 (311)
T 3m2p_A 2 SLKIAVTGGTGFLGQYVVESIKNDG---NTPIILTRSIGNKA----I--------------------------NDYEYRV 48 (311)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTT---CEEEEEESCCC-----------------------------------CCEEEE
T ss_pred CCEEEEECCCcHHHHHHHHHHHhCC---CEEEEEeCCCCccc----C--------------------------CceEEEE
Confidence 4799999999999999999999998 68899999832210 1 3678999
Q ss_pred ccCCCCCCCCChhhhHHHHhcCccEEEEcCccCCccccHHHHHHHhHHHHHHHHHHHHhccCCceEEEEecceeecCcCC
Q 010075 92 GDISSEDLGLKDSNLKEELWNELDIMVNSAAITKFDERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAYVAGERTG 171 (519)
Q Consensus 92 gDl~~~~lgls~~~~~~~l~~~vdiViH~Aa~v~f~~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V~vSTa~v~~~~~~ 171 (519)
+|++ + ++. ..+++++|+|||+||..... +....+++|+.|+.+++++|++. ++++|||+||.++|+...+
T Consensus 49 ~Dl~-~------~~~-~~~~~~~d~Vih~a~~~~~~-~~~~~~~~n~~~~~~ll~a~~~~-~~~r~v~~SS~~vyg~~~~ 118 (311)
T 3m2p_A 49 SDYT-L------EDL-INQLNDVDAVVHLAATRGSQ-GKISEFHDNEILTQNLYDACYEN-NISNIVYASTISAYSDETS 118 (311)
T ss_dssp CCCC-H------HHH-HHHTTTCSEEEECCCCCCSS-SCGGGTHHHHHHHHHHHHHHHHT-TCCEEEEEEEGGGCCCGGG
T ss_pred cccc-H------HHH-HHhhcCCCEEEEccccCCCC-ChHHHHHHHHHHHHHHHHHHHHc-CCCEEEEEccHHHhCCCCC
Confidence 9998 3 333 47778999999999988765 55667899999999999999996 7899999999999986542
Q ss_pred eeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcHHHHHHHHHHHHHHHh--hcCC
Q 010075 172 LILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLMQQS--KENL 249 (519)
Q Consensus 172 ~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~Y~~sK~~aE~lv~~~--~~~l 249 (519)
.++.|+.+. .+.+.|+.||+.+|++++++ ..++
T Consensus 119 ----~~~~E~~~~-----------------------------------------~p~~~Y~~sK~~~E~~~~~~~~~~g~ 153 (311)
T 3m2p_A 119 ----LPWNEKELP-----------------------------------------LPDLMYGVSKLACEHIGNIYSRKKGL 153 (311)
T ss_dssp ----CSBCTTSCC-----------------------------------------CCSSHHHHHHHHHHHHHHHHHHHSCC
T ss_pred ----CCCCCCCCC-----------------------------------------CCCchhHHHHHHHHHHHHHHHHHcCC
Confidence 222222221 45789999999999999987 4689
Q ss_pred cEEEEecCccccCCCCCCCcccccccccHHHHHHhhcCCceeeccCCCceeeeeeHHHHHHHHHHHHHHhccCCCCCcEE
Q 010075 250 SLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMIVAMVAHAKQPSDANIY 329 (519)
Q Consensus 250 p~~IvRPs~V~g~~~~p~~gw~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~d~vpVDdva~aii~a~~~~~~~~~~~~iy 329 (519)
+++|+||+.|||+...+. .....++..+..|....++++++..+++||++|+|++++.++.... .+++|
T Consensus 154 ~~~ilRp~~v~G~~~~~~-------~~~~~~~~~~~~~~~~~~~g~~~~~~~~v~v~Dva~a~~~~~~~~~----~~~~~ 222 (311)
T 3m2p_A 154 CIKNLRFAHLYGFNEKNN-------YMINRFFRQAFHGEQLTLHANSVAKREFLYAKDAAKSVIYALKQEK----VSGTF 222 (311)
T ss_dssp EEEEEEECEEECSCC--C-------CHHHHHHHHHHTCCCEEESSBCCCCEEEEEHHHHHHHHHHHTTCTT----CCEEE
T ss_pred CEEEEeeCceeCcCCCCC-------CHHHHHHHHHHcCCCeEEecCCCeEEceEEHHHHHHHHHHHHhcCC----CCCeE
Confidence 999999999999877432 2344567777788888888999999999999999999999886432 36899
Q ss_pred EecCCCCCchhHHHHHH
Q 010075 330 HVGSSLRNPVTLGLQVA 346 (519)
Q Consensus 330 ni~s~~~~~i~~~~~~~ 346 (519)
|++++...++..+...+
T Consensus 223 ~i~~~~~~s~~e~~~~i 239 (311)
T 3m2p_A 223 NIGSGDALTNYEVANTI 239 (311)
T ss_dssp EECCSCEECHHHHHHHH
T ss_pred EeCCCCcccHHHHHHHH
Confidence 99998655543343333
|
| >4dqv_A Probable peptide synthetase NRP (peptide synthase; GXXGXXG motif, rossmann fold, short chain dehydrogenase/REDU family, reductase; 2.30A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
Probab=99.97 E-value=6.7e-31 Score=280.69 Aligned_cols=289 Identities=25% Similarity=0.363 Sum_probs=201.5
Q ss_pred cCCCEEEEeCCccHHHHHHHHHHHHhCCCc-cEEEEEEecCCcccHHHHHHHHHhhh---hhHHHHHhhhccccccccCC
Q 010075 10 LENKTILVSGVTGFVAKVFIEKILRVQPNV-KKLYLFVRAADIDSAALRFQNEVLAK---DVFNVLKEKWGTRLNSFISE 85 (519)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v-~~V~~LvR~~~~~~~~~rl~~~~~~~---~~f~~l~~~~~~~~~~~~~~ 85 (519)
.++|+|||||||||||++|+++|++.++ + .+|++++|++......+++.+. +.. ...+.+... ...
T Consensus 71 ~~~~~VLVTGatG~IG~~l~~~Ll~~~~-~g~~V~~l~R~~~~~~~~~~l~~~-~~~~~~~~~~~~~~~--------~~~ 140 (478)
T 4dqv_A 71 PELRTVLLTGATGFLGRYLVLELLRRLD-VDGRLICLVRAESDEDARRRLEKT-FDSGDPELLRHFKEL--------AAD 140 (478)
T ss_dssp SCCCEEEEECTTSHHHHHHHHHHHHHSC-TTCEEEEEECSSSHHHHHHHHHGG-GCSSCHHHHHHHHHH--------HTT
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHhcCC-CCCEEEEEECCCCcHHHHHHHHHH-HHhcchhhhhhhhhh--------ccC
Confidence 4689999999999999999999999832 2 7999999998877777776632 221 111111111 136
Q ss_pred ceEEEeccCCCCCCCCChhhhHHHHhcCccEEEEcCccCCccccHHHHHHHhHHHHHHHHHHHHhccCCceEEEEeccee
Q 010075 86 KITFVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKFDERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAYV 165 (519)
Q Consensus 86 ~v~~v~gDl~~~~lgls~~~~~~~l~~~vdiViH~Aa~v~f~~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V~vSTa~v 165 (519)
+++++.||++++++|++.++. ..+++++|+|||+||.+.+ .+++..+++|+.||.+++++|++. ++++|||+||.++
T Consensus 141 ~v~~v~~Dl~~~~~gld~~~~-~~~~~~~D~Vih~Aa~~~~-~~~~~~~~~Nv~gt~~ll~aa~~~-~~~~~V~iSS~~v 217 (478)
T 4dqv_A 141 RLEVVAGDKSEPDLGLDQPMW-RRLAETVDLIVDSAAMVNA-FPYHELFGPNVAGTAELIRIALTT-KLKPFTYVSTADV 217 (478)
T ss_dssp TEEEEECCTTSGGGGCCHHHH-HHHHHHCCEEEECCSSCSB-SSCCEEHHHHHHHHHHHHHHHTSS-SCCCEEEEEEGGG
T ss_pred ceEEEEeECCCcccCCCHHHH-HHHHcCCCEEEECccccCC-cCHHHHHHHHHHHHHHHHHHHHhC-CCCeEEEEeehhh
Confidence 899999999999999977776 4788899999999999887 667778999999999999999985 8899999999999
Q ss_pred ecCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcHHHHHHHHHHHHHHHh
Q 010075 166 AGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLMQQS 245 (519)
Q Consensus 166 ~~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~Y~~sK~~aE~lv~~~ 245 (519)
++... ..++.|+.+..+ ...+......+.+.|+.||+++|.+++++
T Consensus 218 ~~~~~----~~~~~E~~~~~p------------------------------~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~ 263 (478)
T 4dqv_A 218 GAAIE----PSAFTEDADIRV------------------------------ISPTRTVDGGWAGGYGTSKWAGEVLLREA 263 (478)
T ss_dssp GTTSC----TTTCCSSSCHHH------------------------------HCCEEECCTTSEECHHHHHHHHHHHHHHH
T ss_pred cCccC----CCCcCCcccccc------------------------------cCcccccccccccchHHHHHHHHHHHHHH
Confidence 87633 123333222110 00000111245688999999999999987
Q ss_pred h--cCCcEEEEecCccccCCCCCCCcccccccccHHHHHH-hhcCCcee-eccC------CCceeeeeeHHHHHHHHHHH
Q 010075 246 K--ENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVA-SAQGNLRC-LVGE------TKVIMDVIPVDMVVNAMIVA 315 (519)
Q Consensus 246 ~--~~lp~~IvRPs~V~g~~~~p~~gw~~~~~~~~~~i~~-~~~g~~~~-~~~~------~~~~~d~vpVDdva~aii~a 315 (519)
. .+++++|+||+.|||+.... |-......+..++.. ...|..+. +++. ++..+|+|||||+|++++.+
T Consensus 264 ~~~~gi~~~ivRpg~v~G~~~~~--g~~~~~~~~~~l~~~~~~~g~~P~~~~~~~~~G~~~~~~~~~v~vdDvA~ai~~~ 341 (478)
T 4dqv_A 264 NDLCALPVAVFRCGMILADTSYA--GQLNMSDWVTRMVLSLMATGIAPRSFYEPDSEGNRQRAHFDGLPVTFVAEAIAVL 341 (478)
T ss_dssp HHHHCCCEEEEEECEEECCSSSS--SCCCTTBHHHHHHHHHHHHCEEESCSBCCCTTSCCCCCCCCEEEHHHHHHHHHHH
T ss_pred HHHhCCCeEEEECceeeCCCccC--CcCCHHHHHHHHHHHHHHcCcccccccccccccccccceeeeeeHHHHHHHHHHH
Confidence 3 58999999999999975411 100111122233332 23344332 2222 26789999999999999999
Q ss_pred HHHhcc-CCCCCcEEEecCCCCCchhH--HHHHHH
Q 010075 316 MVAHAK-QPSDANIYHVGSSLRNPVTL--GLQVAN 347 (519)
Q Consensus 316 ~~~~~~-~~~~~~iyni~s~~~~~i~~--~~~~~~ 347 (519)
+..... ....+++||++++..++++| ++..+.
T Consensus 342 ~~~~~~~~~~~~~~ynv~~~~~~~~s~~el~~~l~ 376 (478)
T 4dqv_A 342 GARVAGSSLAGFATYHVMNPHDDGIGLDEYVDWLI 376 (478)
T ss_dssp HHTTC-CCCCSEEEEEESCCCCSSCSHHHHHHHHH
T ss_pred HhhcccCCCCCCceEEecCCCCCCcCHHHHHHHHH
Confidence 874211 12236899999998755665 444443
|
| >3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei} | Back alignment and structure |
|---|
Probab=99.97 E-value=4.8e-30 Score=264.62 Aligned_cols=262 Identities=18% Similarity=0.176 Sum_probs=192.7
Q ss_pred hcCCCEEEEeCCccHHHHHHHHHHHHh-CCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCce
Q 010075 9 FLENKTILVSGVTGFVAKVFIEKILRV-QPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKI 87 (519)
Q Consensus 9 ~~~~k~VlITGaTGFlG~~Lv~~LL~~-g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v 87 (519)
.+++|+|||||||||||++|++.|++. | .+|+++.|+....... ....++
T Consensus 21 ~m~~~~vlVtGatG~iG~~l~~~L~~~~g---~~V~~~~r~~~~~~~~--------------------------~~~~~v 71 (372)
T 3slg_A 21 SMKAKKVLILGVNGFIGHHLSKRILETTD---WEVFGMDMQTDRLGDL--------------------------VKHERM 71 (372)
T ss_dssp --CCCEEEEESCSSHHHHHHHHHHHHHSS---CEEEEEESCCTTTGGG--------------------------GGSTTE
T ss_pred ccCCCEEEEECCCChHHHHHHHHHHhCCC---CEEEEEeCChhhhhhh--------------------------ccCCCe
Confidence 367799999999999999999999998 6 6899999986432110 002689
Q ss_pred EEEeccCC-CCCCCCChhhhHHHHhcCccEEEEcCccCCcc---ccHHHHHHHhHHHHHHHHHHHHhccCCceEEEEecc
Q 010075 88 TFVPGDIS-SEDLGLKDSNLKEELWNELDIMVNSAAITKFD---ERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTA 163 (519)
Q Consensus 88 ~~v~gDl~-~~~lgls~~~~~~~l~~~vdiViH~Aa~v~f~---~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V~vSTa 163 (519)
+++.+|++ + ... ...+++++|+|||+||..... ++....+++|+.|+.+++++|++. + ++|||+||+
T Consensus 72 ~~~~~Dl~~d------~~~-~~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~-~-~~~v~~SS~ 142 (372)
T 3slg_A 72 HFFEGDITIN------KEW-VEYHVKKCDVILPLVAIATPATYVKQPLRVFELDFEANLPIVRSAVKY-G-KHLVFPSTS 142 (372)
T ss_dssp EEEECCTTTC------HHH-HHHHHHHCSEEEECBCCCCHHHHHHCHHHHHHHHTTTTHHHHHHHHHH-T-CEEEEECCG
T ss_pred EEEeCccCCC------HHH-HHHHhccCCEEEEcCccccHHHHhhCHHHHHHHHHHHHHHHHHHHHHh-C-CcEEEeCcH
Confidence 99999999 4 333 346777999999999987643 466778999999999999999997 5 899999999
Q ss_pred eeecCcCC-eeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcHHHHHHHHHHHHH
Q 010075 164 YVAGERTG-LILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLM 242 (519)
Q Consensus 164 ~v~~~~~~-~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~Y~~sK~~aE~lv 242 (519)
.+|+...+ .+.|...+ .. ......+.+.|+.||+.+|+++
T Consensus 143 ~vyg~~~~~~~~e~~~~----~~-----------------------------------~~p~~~p~~~Y~~sK~~~E~~~ 183 (372)
T 3slg_A 143 EVYGMCADEQFDPDASA----LT-----------------------------------YGPINKPRWIYACSKQLMDRVI 183 (372)
T ss_dssp GGGBSCCCSSBCTTTCC----EE-----------------------------------ECCTTCTTHHHHHHHHHHHHHH
T ss_pred HHhCCCCCCCCCccccc----cc-----------------------------------cCCCCCCCCcHHHHHHHHHHHH
Confidence 99987542 22332111 00 0001134568999999999999
Q ss_pred HHhh-cCCcEEEEecCccccCCCCCCCcccccc-cccHHHHHHhhcCCceeeccCCCceeeeeeHHHHHHHHHHHHHHhc
Q 010075 243 QQSK-ENLSLVIIRPTVVSGTYKEPFPGWVEDL-KTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMIVAMVAHA 320 (519)
Q Consensus 243 ~~~~-~~lp~~IvRPs~V~g~~~~p~~gw~~~~-~~~~~~i~~~~~g~~~~~~~~~~~~~d~vpVDdva~aii~a~~~~~ 320 (519)
+.+. .+++++|+||+.|||+...+..++.... ..+..++..+..|....++++++..+++|||+|+|++++.++....
T Consensus 184 ~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~a~~~~~~~~~ 263 (372)
T 3slg_A 184 WGYGMEGLNFTLFRPFNWIGPGLDSIYTPKEGSSRVVTQFLGHIVRGENISLVDGGSQKRAFTYVDDGISALMKIIENSN 263 (372)
T ss_dssp HHHHTTTCEEEEEEECSEECSSCCCTTCSBSCSCHHHHHHHHHHHHTCCEEEGGGGCCEEECEEHHHHHHHHHHHHHCGG
T ss_pred HHHHHCCCCEEEEccccccCCCcccccccccccchHHHHHHHHHHcCCCcEEeCCCceEEEEEEHHHHHHHHHHHHhccc
Confidence 9873 2899999999999999875432222211 2344566677788888888999999999999999999999997543
Q ss_pred cCCCCCcEEEecCC-CCCchhHHHHHHHH
Q 010075 321 KQPSDANIYHVGSS-LRNPVTLGLQVANT 348 (519)
Q Consensus 321 ~~~~~~~iyni~s~-~~~~i~~~~~~~~~ 348 (519)
.. ..+++||++++ ...++..+...+..
T Consensus 264 ~~-~~~~~~ni~~~~~~~s~~e~~~~i~~ 291 (372)
T 3slg_A 264 GV-ATGKIYNIGNPNNNFSVRELANKMLE 291 (372)
T ss_dssp GT-TTTEEEEECCTTCEEEHHHHHHHHHH
T ss_pred Cc-CCCceEEeCCCCCCccHHHHHHHHHH
Confidence 11 13689999994 55554445555443
|
| >3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.97 E-value=4.4e-29 Score=254.06 Aligned_cols=258 Identities=17% Similarity=0.182 Sum_probs=185.4
Q ss_pred CCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccH-HHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 010075 11 ENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSA-ALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (519)
Q Consensus 11 ~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~-~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (519)
.+|+|||||||||||++++++|++.| .+|+++.|....... .+++. ... ..++.+
T Consensus 4 ~~~~vlVTGatG~iG~~l~~~L~~~G---~~V~~~~r~~~~~~~~~~~~~-------------~~~--------~~~~~~ 59 (341)
T 3enk_A 4 TKGTILVTGGAGYIGSHTAVELLAHG---YDVVIADNLVNSKREAIARIE-------------KIT--------GKTPAF 59 (341)
T ss_dssp SSCEEEEETTTSHHHHHHHHHHHHTT---CEEEEECCCSSSCTHHHHHHH-------------HHH--------SCCCEE
T ss_pred CCcEEEEecCCcHHHHHHHHHHHHCC---CcEEEEecCCcchHHHHHHHH-------------hhc--------CCCceE
Confidence 46899999999999999999999998 688999997654332 22221 111 257899
Q ss_pred EeccCCCCCCCCChhhhHHHHhc--CccEEEEcCccCCcc---ccHHHHHHHhHHHHHHHHHHHHhccCCceEEEEecce
Q 010075 90 VPGDISSEDLGLKDSNLKEELWN--ELDIMVNSAAITKFD---ERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAY 164 (519)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~~--~vdiViH~Aa~v~f~---~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V~vSTa~ 164 (519)
+.+|+++ .+....+++ ++|+|||+||..... +.....+++|+.|+.+++++|++. +.++|||+||+.
T Consensus 60 ~~~Dl~d-------~~~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~iv~~SS~~ 131 (341)
T 3enk_A 60 HETDVSD-------ERALARIFDAHPITAAIHFAALKAVGESVAKPIEYYRNNLDSLLSLLRVMRER-AVKRIVFSSSAT 131 (341)
T ss_dssp ECCCTTC-------HHHHHHHHHHSCCCEEEECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHT-TCCEEEEEEEGG
T ss_pred EEeecCC-------HHHHHHHHhccCCcEEEECccccccCccccChHHHHHHHHHHHHHHHHHHHhC-CCCEEEEEecce
Confidence 9999995 343446666 899999999987643 455678999999999999999986 788999999999
Q ss_pred eecCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcHHHHHHHHHHHHHHH
Q 010075 165 VAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLMQQ 244 (519)
Q Consensus 165 v~~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~Y~~sK~~aE~lv~~ 244 (519)
+|+...+ .+++|+.+. .+.+.|+.||+.+|++++.
T Consensus 132 ~~g~~~~----~~~~e~~~~-----------------------------------------~~~~~Y~~sK~~~e~~~~~ 166 (341)
T 3enk_A 132 VYGVPER----SPIDETFPL-----------------------------------------SATNPYGQTKLMAEQILRD 166 (341)
T ss_dssp GBCSCSS----SSBCTTSCC-----------------------------------------BCSSHHHHHHHHHHHHHHH
T ss_pred EecCCCC----CCCCCCCCC-----------------------------------------CCCChhHHHHHHHHHHHHH
Confidence 9986432 222222221 3567899999999999987
Q ss_pred h--h-cCCcEEEEecCccccCCCCCCCccccc--ccccHHHHHHhhcC--Cceeecc------CCCceeeeeeHHHHHHH
Q 010075 245 S--K-ENLSLVIIRPTVVSGTYKEPFPGWVED--LKTINTLFVASAQG--NLRCLVG------ETKVIMDVIPVDMVVNA 311 (519)
Q Consensus 245 ~--~-~~lp~~IvRPs~V~g~~~~p~~gw~~~--~~~~~~~i~~~~~g--~~~~~~~------~~~~~~d~vpVDdva~a 311 (519)
+ . .+++++++||+.|||+......|.... .......+.....+ ....+++ +++..+++|||||+|++
T Consensus 167 ~~~~~~~~~~~~lRp~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~i~v~Dva~a 246 (341)
T 3enk_A 167 VEAADPSWRVATLRYFNPVGAHESGLIGEDPAGIPNNLMPYVAQVAVGKLEKLRVFGSDYPTPDGTGVRDYIHVVDLARG 246 (341)
T ss_dssp HHHHCTTCEEEEEEECEEECCCTTSSCCCCCSSSCSSHHHHHHHHHHTSSSCEEEECSCSSSTTSSCEECEEEHHHHHHH
T ss_pred HhhcCCCceEEEEeeccccCCccccccCCCcccCccchHHHHHHHHhcCCCceEEeCCccCCCCCCeeEeeEEHHHHHHH
Confidence 6 2 359999999999999875433232211 12233344444444 3334455 78899999999999999
Q ss_pred HHHHHHHhccCCCCCcEEEecCCCCCchhHHHHHH
Q 010075 312 MIVAMVAHAKQPSDANIYHVGSSLRNPVTLGLQVA 346 (519)
Q Consensus 312 ii~a~~~~~~~~~~~~iyni~s~~~~~i~~~~~~~ 346 (519)
++.++....... .+++||++++...++..+...+
T Consensus 247 ~~~~~~~~~~~~-~~~~~ni~~~~~~s~~e~~~~i 280 (341)
T 3enk_A 247 HIAALDALERRD-ASLTVNLGTGRGYSVLEVVRAF 280 (341)
T ss_dssp HHHHHHHHHHHT-SCEEEEESCSCCEEHHHHHHHH
T ss_pred HHHHHHhhhcCC-cceEEEeCCCCceeHHHHHHHH
Confidence 999987532111 2689999998766654444443
|
| >3ko8_A NAD-dependent epimerase/dehydratase; isomerase, UDP-galactose 4-epimerase; HET: NAD; 1.80A {Pyrobaculum calidifontis} SCOP: c.2.1.0 PDB: 3icp_A* 3aw9_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=2e-29 Score=253.40 Aligned_cols=242 Identities=16% Similarity=0.172 Sum_probs=179.1
Q ss_pred CEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEEec
Q 010075 13 KTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVPG 92 (519)
Q Consensus 13 k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v~g 92 (519)
|+|||||||||||++|++.|++.| .+|+++.|....... ....+++++.+
T Consensus 1 m~vlVtGatG~iG~~l~~~L~~~g---~~V~~~~r~~~~~~~---------------------------~~~~~~~~~~~ 50 (312)
T 3ko8_A 1 MRIVVTGGAGFIGSHLVDKLVELG---YEVVVVDNLSSGRRE---------------------------FVNPSAELHVR 50 (312)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTT---CEEEEECCCSSCCGG---------------------------GSCTTSEEECC
T ss_pred CEEEEECCCChHHHHHHHHHHhCC---CEEEEEeCCCCCchh---------------------------hcCCCceEEEC
Confidence 689999999999999999999998 688999987644311 11357899999
Q ss_pred cCCCCCCCCChhhhHHHHhcCccEEEEcCccCCc---cccHHHHHHHhHHHHHHHHHHHHhccCCceEEEEecceeecCc
Q 010075 93 DISSEDLGLKDSNLKEELWNELDIMVNSAAITKF---DERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAYVAGER 169 (519)
Q Consensus 93 Dl~~~~lgls~~~~~~~l~~~vdiViH~Aa~v~f---~~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V~vSTa~v~~~~ 169 (519)
|++++. . ...+++ |+|||+||.... .++....+++|+.|+.+++++|++. ++++|||+||..+|+..
T Consensus 51 Dl~d~~-------~-~~~~~~-d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~-~~~~iv~~SS~~vyg~~ 120 (312)
T 3ko8_A 51 DLKDYS-------W-GAGIKG-DVVFHFAANPEVRLSTTEPIVHFNENVVATFNVLEWARQT-GVRTVVFASSSTVYGDA 120 (312)
T ss_dssp CTTSTT-------T-TTTCCC-SEEEECCSSCSSSGGGSCHHHHHHHHHHHHHHHHHHHHHH-TCCEEEEEEEGGGGCSC
T ss_pred ccccHH-------H-HhhcCC-CEEEECCCCCCchhhhhCHHHHHHHHHHHHHHHHHHHHHc-CCCEEEEeCcHHHhCCC
Confidence 999643 2 244455 999999996532 3567888999999999999999986 78999999999999875
Q ss_pred CCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcHHHHHHHHHHHHHHHh--hc
Q 010075 170 TGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLMQQS--KE 247 (519)
Q Consensus 170 ~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~Y~~sK~~aE~lv~~~--~~ 247 (519)
.+ .+++|+.+. .+.+.|+.||+.+|++++.+ ..
T Consensus 121 ~~----~~~~e~~~~-----------------------------------------~p~~~Y~~sK~~~e~~~~~~~~~~ 155 (312)
T 3ko8_A 121 DV----IPTPEEEPY-----------------------------------------KPISVYGAAKAAGEVMCATYARLF 155 (312)
T ss_dssp SS----SSBCTTSCC-----------------------------------------CCCSHHHHHHHHHHHHHHHHHHHH
T ss_pred CC----CCCCCCCCC-----------------------------------------CCCChHHHHHHHHHHHHHHHHHHh
Confidence 42 122222221 45689999999999999887 35
Q ss_pred CCcEEEEecCccccCCCCCCCcccccccccHHHHHHhhcC-CceeeccCCCceeeeeeHHHHHHHHHHHHHHhccCCCCC
Q 010075 248 NLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQG-NLRCLVGETKVIMDVIPVDMVVNAMIVAMVAHAKQPSDA 326 (519)
Q Consensus 248 ~lp~~IvRPs~V~g~~~~p~~gw~~~~~~~~~~i~~~~~g-~~~~~~~~~~~~~d~vpVDdva~aii~a~~~~~~~~~~~ 326 (519)
+++++++||+.|||+...+ ..+..++..+..+ ....+.++++..++++||+|+|++++.++.........+
T Consensus 156 g~~~~~lrp~~v~g~~~~~--------~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~a~~~~~~~~~~~~~~~ 227 (312)
T 3ko8_A 156 GVRCLAVRYANVVGPRLRH--------GVIYDFIMKLRRNPNVLEVLGDGTQRKSYLYVRDAVEATLAAWKKFEEMDAPF 227 (312)
T ss_dssp CCEEEEEEECEEECTTCCS--------SHHHHHHHHHHHCTTEEEEC----CEECEEEHHHHHHHHHHHHHHHHHSCCSE
T ss_pred CCCEEEEeeccccCcCCCC--------ChHHHHHHHHHhCCCCeEEcCCCCeEEeeEEHHHHHHHHHHHHHhccccCCCC
Confidence 8999999999999987532 1233455555555 345567889999999999999999999998622122236
Q ss_pred cEEEecCCCCCchhHHHHHHH
Q 010075 327 NIYHVGSSLRNPVTLGLQVAN 347 (519)
Q Consensus 327 ~iyni~s~~~~~i~~~~~~~~ 347 (519)
++||++++...++..+...+.
T Consensus 228 ~~~ni~~~~~~s~~e~~~~i~ 248 (312)
T 3ko8_A 228 LALNVGNVDAVRVLDIAQIVA 248 (312)
T ss_dssp EEEEESCSSCEEHHHHHHHHH
T ss_pred cEEEEcCCCceeHHHHHHHHH
Confidence 899999987666554544443
|
| >4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=7.5e-30 Score=260.56 Aligned_cols=250 Identities=16% Similarity=0.159 Sum_probs=183.1
Q ss_pred hhhcCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCc
Q 010075 7 VEFLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEK 86 (519)
Q Consensus 7 ~~~~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~ 86 (519)
..-.++|+|||||||||||++|++.|++.| .+|+++.|+... .+
T Consensus 14 ~~~~~~~~vlVtGatG~iG~~l~~~L~~~G---~~V~~~~r~~~~---------------------------------~~ 57 (347)
T 4id9_A 14 LVPRGSHMILVTGSAGRVGRAVVAALRTQG---RTVRGFDLRPSG---------------------------------TG 57 (347)
T ss_dssp -------CEEEETTTSHHHHHHHHHHHHTT---CCEEEEESSCCS---------------------------------SC
T ss_pred ccccCCCEEEEECCCChHHHHHHHHHHhCC---CEEEEEeCCCCC---------------------------------CC
Confidence 345678999999999999999999999998 578999997532 35
Q ss_pred eEEEeccCCCCCCCCChhhhHHHHhcCccEEEEcCccCCcc-ccHHHHHHHhHHHHHHHHHHHHhccCCceEEEEeccee
Q 010075 87 ITFVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKFD-ERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAYV 165 (519)
Q Consensus 87 v~~v~gDl~~~~lgls~~~~~~~l~~~vdiViH~Aa~v~f~-~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V~vSTa~v 165 (519)
+.++.+|+++ .+....+++++|+|||+||..... ...+..+++|+.|+.+++++|++. ++++|||+||+++
T Consensus 58 ~~~~~~Dl~d-------~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~-~~~~~V~~SS~~v 129 (347)
T 4id9_A 58 GEEVVGSLED-------GQALSDAIMGVSAVLHLGAFMSWAPADRDRMFAVNVEGTRRLLDAASAA-GVRRFVFASSGEV 129 (347)
T ss_dssp CSEEESCTTC-------HHHHHHHHTTCSEEEECCCCCCSSGGGHHHHHHHHTHHHHHHHHHHHHT-TCSEEEEEEEGGG
T ss_pred ccEEecCcCC-------HHHHHHHHhCCCEEEECCcccCcchhhHHHHHHHHHHHHHHHHHHHHHc-CCCeEEEECCHHH
Confidence 6789999994 444457788999999999987764 345888999999999999999985 8899999999999
Q ss_pred ecCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcHHHHHHHHHHHHHHHh
Q 010075 166 AGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLMQQS 245 (519)
Q Consensus 166 ~~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~Y~~sK~~aE~lv~~~ 245 (519)
|+.... ...++.|+.+. .+.+.|+.||+++|++++.+
T Consensus 130 yg~~~~--~~~~~~E~~~~-----------------------------------------~~~~~Y~~sK~~~E~~~~~~ 166 (347)
T 4id9_A 130 YPENRP--EFLPVTEDHPL-----------------------------------------CPNSPYGLTKLLGEELVRFH 166 (347)
T ss_dssp TTTTSC--SSSSBCTTSCC-----------------------------------------CCCSHHHHHHHHHHHHHHHH
T ss_pred hCCCCC--CCCCcCCCCCC-----------------------------------------CCCChHHHHHHHHHHHHHHH
Confidence 986311 11223222221 45689999999999999977
Q ss_pred --hcCCcEEEEecCccc-------------cCCCCCCCcccc----cccccHHHHHHhhcCCceeeccCCCceeee----
Q 010075 246 --KENLSLVIIRPTVVS-------------GTYKEPFPGWVE----DLKTINTLFVASAQGNLRCLVGETKVIMDV---- 302 (519)
Q Consensus 246 --~~~lp~~IvRPs~V~-------------g~~~~p~~gw~~----~~~~~~~~i~~~~~g~~~~~~~~~~~~~d~---- 302 (519)
..+++++|+||+.|| |+...+.+.+.. .-.....++.....|....++++++..+++
T Consensus 167 ~~~~~~~~~ilRp~~v~~~~~~~~~~~~~~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 246 (347)
T 4id9_A 167 QRSGAMETVILRFSHTQDATELLDEDSFFSGPRFFLRPRIHQQQNFGNAAIAELLQSRDIGEPSHILARNENGRPFRMHI 246 (347)
T ss_dssp HHHSSSEEEEEEECEEECGGGTTCTTSSSHHHHHBHHHHHHHHHHHTCHHHHHHHHHHCCSSCCEEEEECTTCCBCEECE
T ss_pred HHhcCCceEEEccceEeecccccccccccCCCCcccccccccccccchhHHHHHHHHHHcCCCeEEeCCCCcccCCccCc
Confidence 458999999999999 544321000000 012233456667777777778888889999
Q ss_pred eeHHHHHHHHHHHHHHhccCCCCCcEEEecCCCCCchhHHHHHH
Q 010075 303 IPVDMVVNAMIVAMVAHAKQPSDANIYHVGSSLRNPVTLGLQVA 346 (519)
Q Consensus 303 vpVDdva~aii~a~~~~~~~~~~~~iyni~s~~~~~i~~~~~~~ 346 (519)
+||+|+|++++.++..... .+++||++++...++..+...+
T Consensus 247 i~v~Dva~ai~~~~~~~~~---~~~~~ni~~~~~~s~~e~~~~i 287 (347)
T 4id9_A 247 TDTRDMVAGILLALDHPEA---AGGTFNLGADEPADFAALLPKI 287 (347)
T ss_dssp EEHHHHHHHHHHHHHCGGG---TTEEEEESCSSCEEHHHHHHHH
T ss_pred EeHHHHHHHHHHHhcCccc---CCCeEEECCCCcccHHHHHHHH
Confidence 9999999999999975432 2579999998665543344433
|
| >2hun_A 336AA long hypothetical DTDP-glucose 4,6-dehydrat; rossmann fold, structural genomics, NPPSFA; HET: NAD; 2.07A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=99.97 E-value=3.2e-29 Score=254.55 Aligned_cols=251 Identities=24% Similarity=0.292 Sum_probs=181.3
Q ss_pred CCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEE
Q 010075 11 ENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFV 90 (519)
Q Consensus 11 ~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v 90 (519)
++|+|||||||||||++|+++|++.|++ .+|+++.|....... +.+. + +. ...+++++
T Consensus 2 ~~m~vlVTGatG~iG~~l~~~L~~~g~~-~~V~~~~r~~~~~~~-~~~~-------------~-----~~--~~~~~~~~ 59 (336)
T 2hun_A 2 HSMKLLVTGGMGFIGSNFIRYILEKHPD-WEVINIDKLGYGSNP-ANLK-------------D-----LE--DDPRYTFV 59 (336)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHHHCTT-CEEEEEECCCTTCCG-GGGT-------------T-----TT--TCTTEEEE
T ss_pred CCCeEEEECCCchHHHHHHHHHHHhCCC-CEEEEEecCcccCch-hHHh-------------h-----hc--cCCceEEE
Confidence 4689999999999999999999998754 488999986522111 0000 0 00 02578999
Q ss_pred eccCCCCCCCCChhhhHHHHhcCccEEEEcCccCCcc---ccHHHHHHHhHHHHHHHHHHHHhccCCceEEEEecceeec
Q 010075 91 PGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKFD---ERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAYVAG 167 (519)
Q Consensus 91 ~gDl~~~~lgls~~~~~~~l~~~vdiViH~Aa~v~f~---~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V~vSTa~v~~ 167 (519)
.+|+++ .+....++.++|+|||+||..... ++.+..+++|+.|+.+++++|.+.+..++|||+||..+||
T Consensus 60 ~~Dl~d-------~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~~~iv~~SS~~vyg 132 (336)
T 2hun_A 60 KGDVAD-------YELVKELVRKVDGVVHLAAESHVDRSISSPEIFLHSNVIGTYTLLESIRRENPEVRFVHVSTDEVYG 132 (336)
T ss_dssp ECCTTC-------HHHHHHHHHTCSEEEECCCCCCHHHHHHCTHHHHHHHHHHHHHHHHHHHHHCTTSEEEEEEEGGGGC
T ss_pred EcCCCC-------HHHHHHHhhCCCEEEECCCCcChhhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEeccHHHHC
Confidence 999995 344456678999999999987542 4567789999999999999999873347999999999998
Q ss_pred CcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcHHHHHHHHHHHHHHHh--
Q 010075 168 ERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLMQQS-- 245 (519)
Q Consensus 168 ~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~Y~~sK~~aE~lv~~~-- 245 (519)
...+ .+++|+.+. .+.+.|+.||+.+|++++.+
T Consensus 133 ~~~~----~~~~E~~~~-----------------------------------------~~~~~Y~~sK~~~e~~~~~~~~ 167 (336)
T 2hun_A 133 DILK----GSFTENDRL-----------------------------------------MPSSPYSATKAASDMLVLGWTR 167 (336)
T ss_dssp CCSS----SCBCTTBCC-----------------------------------------CCCSHHHHHHHHHHHHHHHHHH
T ss_pred CCCC----CCcCCCCCC-----------------------------------------CCCCccHHHHHHHHHHHHHHHH
Confidence 6421 222222221 34678999999999999876
Q ss_pred hcCCcEEEEecCccccCCCCCCCcccccccccHHHHHHhhcCCceeeccCCCceeeeeeHHHHHHHHHHHHHHhccCCCC
Q 010075 246 KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMIVAMVAHAKQPSD 325 (519)
Q Consensus 246 ~~~lp~~IvRPs~V~g~~~~p~~gw~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~d~vpVDdva~aii~a~~~~~~~~~~ 325 (519)
..+++++++||+.|||+...+. .....++..+..|....++++++...+++|++|+|++++.++.... .
T Consensus 168 ~~~~~~~ilrp~~v~g~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~~~----~ 236 (336)
T 2hun_A 168 TYNLNASITRCTNNYGPYQFPE-------KLIPKTIIRASLGLKIPIYGTGKNVRDWLYVEDHVRAIELVLLKGE----S 236 (336)
T ss_dssp HTTCEEEEEEECEEESTTCCTT-------SHHHHHHHHHHTTCCEEEETC---CEEEEEHHHHHHHHHHHHHHCC----T
T ss_pred HhCCCEEEEeeeeeeCcCCCcC-------chHHHHHHHHHcCCCceEeCCCCceeeeEEHHHHHHHHHHHHhCCC----C
Confidence 3589999999999999876321 1233455566667666677888899999999999999999886422 2
Q ss_pred CcEEEecCCCCCchhHHHHHH
Q 010075 326 ANIYHVGSSLRNPVTLGLQVA 346 (519)
Q Consensus 326 ~~iyni~s~~~~~i~~~~~~~ 346 (519)
+++||++++...++..+...+
T Consensus 237 g~~~~v~~~~~~s~~e~~~~i 257 (336)
T 2hun_A 237 REIYNISAGEEKTNLEVVKII 257 (336)
T ss_dssp TCEEEECCSCEECHHHHHHHH
T ss_pred CCEEEeCCCCcccHHHHHHHH
Confidence 679999998655543343333
|
| >4f6l_B AUSA reductase domain protein; thioester reductase, oxidoreductase; 3.86A {Staphylococcus aureus} | Back alignment and structure |
|---|
Probab=99.97 E-value=1.3e-29 Score=272.74 Aligned_cols=315 Identities=17% Similarity=0.205 Sum_probs=207.1
Q ss_pred CCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEEe
Q 010075 12 NKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVP 91 (519)
Q Consensus 12 ~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v~ 91 (519)
.|+|||||||||||++|+++|++.+ .+|++++|+.......+|+.+.+... |.. .+......+++++.
T Consensus 150 ~~~VLVTGatG~iG~~l~~~L~~~g---~~V~~l~R~~~~~~~~~~l~~~l~~~--~~~-------~~~~~~~~~v~~v~ 217 (508)
T 4f6l_B 150 LGNTLLTGATGFLGAYLIEALQGYS---HRIYCFIRADNEEIAWYKLMTNLNDY--FSE-------ETVEMMLSNIEVIV 217 (508)
T ss_dssp CEEEEESCTTSHHHHHHHHHTBTTE---EEEEEEEESSSHHHHHHHHHHHHHHH--SCH-------HHHHHHSTTEEEEE
T ss_pred CCeEEEECCccchHHHHHHHHHhcC---CEEEEEECCCChHHHHHHHHHHHHHh--ccc-------ccchhccCceEEEe
Confidence 4799999999999999999998776 78999999988766666766433211 100 00011247899999
Q ss_pred ccCCC-CCCCCChhhhHHHHhcCccEEEEcCccCCccccHHHHHHHhHHHHHHHHHHHHhccCCceEEEEecceeecCcC
Q 010075 92 GDISS-EDLGLKDSNLKEELWNELDIMVNSAAITKFDERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAYVAGERT 170 (519)
Q Consensus 92 gDl~~-~~lgls~~~~~~~l~~~vdiViH~Aa~v~f~~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V~vSTa~v~~~~~ 170 (519)
||+++ +.++ +..++|+|||+||.+++..++....++|+.|+.+++++|++ +.++|||+||.++ |...
T Consensus 218 ~Dl~d~~~l~---------~~~~~D~Vih~Aa~~~~~~~~~~~~~~Nv~gt~~ll~~a~~--~~~~~v~iSS~~v-G~~~ 285 (508)
T 4f6l_B 218 GDFECMDDVV---------LPENMDTIIHAGARTDHFGDDDEFEKVNVQGTVDVIRLAQQ--HHARLIYVSTISV-GTYF 285 (508)
T ss_dssp EBTTBCSSCC---------CSSCCSEEEECCCC--------CCHHHHHHHHHHHHHHHHT--TTCEEEEEEESCT-TSEE
T ss_pred cCCcccccCC---------CccCCCEEEECCceecCCCCHHHHhhhHHHHHHHHHHHHHh--CCCcEEEeCChhh-ccCC
Confidence 99997 4333 45789999999999988888888899999999999999998 6789999999999 5421
Q ss_pred C-eeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcHHHHHHHHHHHHHHHh-hcC
Q 010075 171 G-LILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLMQQS-KEN 248 (519)
Q Consensus 171 ~-~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~Y~~sK~~aE~lv~~~-~~~ 248 (519)
+ ...+.+++|+.+.. ...+.+.|+.||+.+|++++++ ..+
T Consensus 286 ~~~~~~~~~~E~~~~~--------------------------------------~~~~~~~Y~~sK~~~E~~~~~~~~~g 327 (508)
T 4f6l_B 286 DIDTEDVTFSEADVYK--------------------------------------GQLLTSPYTRSKFYSELKVLEAVNNG 327 (508)
T ss_dssp CTTCSCCEECTTCSCS--------------------------------------SBCCCSHHHHHHHHHHHHHHHHHHTT
T ss_pred ccCCcCcccccccccc--------------------------------------cccCCCcHHHHHHHHHHHHHHHHHcC
Confidence 1 11223333322211 0136789999999999999987 468
Q ss_pred CcEEEEecCccccCCCCCCCccccc--ccccHHHHHHhhcCCceeeccCCCceeeeeeHHHHHHHHHHHHHHhccCCCCC
Q 010075 249 LSLVIIRPTVVSGTYKEPFPGWVED--LKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMIVAMVAHAKQPSDA 326 (519)
Q Consensus 249 lp~~IvRPs~V~g~~~~p~~gw~~~--~~~~~~~i~~~~~g~~~~~~~~~~~~~d~vpVDdva~aii~a~~~~~~~~~~~ 326 (519)
++++|+||+.|+|+...+. +..+ ......++.....+..... ++++..++++||||+|++++.++.... .+
T Consensus 328 i~~~ilRp~~v~G~~~~~~--~~~~~~~~~~~~~i~~~~~~~~~~~-~~g~~~~~~v~v~DvA~ai~~~~~~~~----~~ 400 (508)
T 4f6l_B 328 LDGRIVRVGNLTSPYNGRW--HMRNIKTNRFSMVMNDLLQLDCIGV-SMAEMPVDFSFVDTTARQIVALAQVNT----PQ 400 (508)
T ss_dssp CEEEEEEECCEESCSSSCC--CCTTCTTCHHHHHHHHHTTCSEEET-TGGGSEEECEEHHHHHHHHHHHTTBCC----SC
T ss_pred CCEEEEecceeccCCCCCc--ccCCcchHHHHHHHHHHHHcCCCCC-CccCceEEEEcHHHHHHHHHHHHhCCC----CC
Confidence 9999999999999976321 1111 1223455555555443322 446889999999999999999986432 36
Q ss_pred cEEEecCCCCCchhHHHHHHHHHH------HHHHHHHHHhhhhHHHHHHHHHHhcccccccceEEechhHHHHHHHhcCC
Q 010075 327 NIYHVGSSLRNPVTLGLQVANTVF------HNFFKGVYNDLRKKVKFVMRVVEIYKPYFYFNGIFDDTNTEKLRMTARGS 400 (519)
Q Consensus 327 ~iyni~s~~~~~i~~~~~~~~~~~------p~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~w~F~~~n~~~L~~~l~~~ 400 (519)
++||++++...++..+...+.... +.+. ..+... +..+ +..+. ..........|+++++.+.+..+.-.
T Consensus 401 ~~~nl~~~~~~s~~el~~~i~~~~~~~~~~~~w~-~~l~~~-~~~~-~~~~~--~~~~~~~~~~~d~~~~~~~l~~~G~~ 475 (508)
T 4f6l_B 401 IIYHVLSPNKMPVKSLLECVKRKEIELVSDESFN-EILQKQ-DMYE-TIGLT--SVDREQQLAMIDTTLTLKIMNHISEK 475 (508)
T ss_dssp SEEEESCSCEEEHHHHHHHHHSSCCEEECHHHHH-HHHHTT-CCHH-HHHHH--HTGGGSEECEECCHHHHHHHHHHSCC
T ss_pred CEEEeCCCCCCCHHHHHHHHHHcCCcccCHHHHH-HHHHhc-CCcc-chhcc--cccccCcceecchHHHHHHHHHcCCC
Confidence 899999985544444555544321 1111 111111 1111 11111 12233457899999999988877653
|
| >1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=7.4e-29 Score=253.92 Aligned_cols=261 Identities=18% Similarity=0.220 Sum_probs=190.8
Q ss_pred cCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCccc-HHHHHHHHHhhhhhHHHHHhhhccccccccCCceE
Q 010075 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDS-AALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKIT 88 (519)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~-~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~ 88 (519)
+++|+|||||||||||++|++.|++.| .+|+++.|...... ..+.+.++ +... ...++.
T Consensus 25 ~~~~~vlVtGatG~iG~~l~~~L~~~g---~~V~~~~r~~~~~~~~~~~~~~~---------~~~~--------~~~~~~ 84 (352)
T 1sb8_A 25 AQPKVWLITGVAGFIGSNLLETLLKLD---QKVVGLDNFATGHQRNLDEVRSL---------VSEK--------QWSNFK 84 (352)
T ss_dssp HSCCEEEEETTTSHHHHHHHHHHHHTT---CEEEEEECCSSCCHHHHHHHHHH---------SCHH--------HHTTEE
T ss_pred ccCCeEEEECCCcHHHHHHHHHHHHCC---CEEEEEeCCCccchhhHHHHhhh---------cccc--------cCCceE
Confidence 578999999999999999999999988 68899999764321 11222110 0000 015789
Q ss_pred EEeccCCCCCCCCChhhhHHHHhcCccEEEEcCccCCcc---ccHHHHHHHhHHHHHHHHHHHHhccCCceEEEEeccee
Q 010075 89 FVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKFD---ERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAYV 165 (519)
Q Consensus 89 ~v~gDl~~~~lgls~~~~~~~l~~~vdiViH~Aa~v~f~---~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V~vSTa~v 165 (519)
++.+|+++ .+....+++++|+|||+||..... ++++..+++|+.|+.+++++|++. ++++|||+||.++
T Consensus 85 ~~~~Dl~d-------~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~-~~~~~v~~SS~~~ 156 (352)
T 1sb8_A 85 FIQGDIRN-------LDDCNNACAGVDYVLHQAALGSVPRSINDPITSNATNIDGFLNMLIAARDA-KVQSFTYAASSST 156 (352)
T ss_dssp EEECCTTS-------HHHHHHHHTTCSEEEECCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHT-TCSEEEEEEEGGG
T ss_pred EEECCCCC-------HHHHHHHhcCCCEEEECCcccCchhhhhCHHHHHHHHHHHHHHHHHHHHHc-CCCEEEEeccHHh
Confidence 99999994 444457788999999999986542 467788999999999999999986 7899999999999
Q ss_pred ecCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcHHHHHHHHHHHHHHHh
Q 010075 166 AGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLMQQS 245 (519)
Q Consensus 166 ~~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~Y~~sK~~aE~lv~~~ 245 (519)
|+...+ .++.|+.+. .+.+.|+.||+.+|.+++.+
T Consensus 157 ~~~~~~----~~~~E~~~~-----------------------------------------~~~~~Y~~sK~~~e~~~~~~ 191 (352)
T 1sb8_A 157 YGDHPG----LPKVEDTIG-----------------------------------------KPLSPYAVTKYVNELYADVF 191 (352)
T ss_dssp GTTCCC----SSBCTTCCC-----------------------------------------CCCSHHHHHHHHHHHHHHHH
T ss_pred cCCCCC----CCCCCCCCC-----------------------------------------CCCChhHHHHHHHHHHHHHH
Confidence 986532 122222221 45678999999999999876
Q ss_pred --hcCCcEEEEecCccccCCCCCCCcccccccccHHHHHHhhcCCceeeccCCCceeeeeeHHHHHHHHHHHHHHhccCC
Q 010075 246 --KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMIVAMVAHAKQP 323 (519)
Q Consensus 246 --~~~lp~~IvRPs~V~g~~~~p~~gw~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~d~vpVDdva~aii~a~~~~~~~~ 323 (519)
..+++++++||+.|||+...+...+. .....++..+..|....++++++..+++++|+|+|++++.++.....
T Consensus 192 ~~~~g~~~~ilRp~~v~G~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~g~g~~~~~~i~v~Dva~a~~~~~~~~~~-- 266 (352)
T 1sb8_A 192 SRCYGFSTIGLRYFNVFGRRQDPNGAYA---AVIPKWTSSMIQGDDVYINGDGETSRDFCYIENTVQANLLAATAGLD-- 266 (352)
T ss_dssp HHHHCCCCEEEEECCEECTTCCCCSTTC---CHHHHHHHHHHHTCCCEEESSSCCEECCEEHHHHHHHHHHHHTCCGG--
T ss_pred HHHcCCCEEEEEECceeCcCCCCCcchh---hHHHHHHHHHHCCCCcEEeCCCCceEeeEEHHHHHHHHHHHHhcccc--
Confidence 34899999999999998764321111 12334555666677666778899999999999999999988864111
Q ss_pred CCCcEEEecCCCCCchhHHHHHHHH
Q 010075 324 SDANIYHVGSSLRNPVTLGLQVANT 348 (519)
Q Consensus 324 ~~~~iyni~s~~~~~i~~~~~~~~~ 348 (519)
..+++||++++...++..+...+..
T Consensus 267 ~~~~~~ni~~~~~~s~~e~~~~i~~ 291 (352)
T 1sb8_A 267 ARNQVYNIAVGGRTSLNQLFFALRD 291 (352)
T ss_dssp GCSEEEEESCSCCEEHHHHHHHHHH
T ss_pred CCCceEEeCCCCCccHHHHHHHHHH
Confidence 1268999999866554445444443
|
| >4f6c_A AUSA reductase domain protein; thioester reductase, oxidoreductase; 2.81A {Staphylococcus aureus} | Back alignment and structure |
|---|
Probab=99.97 E-value=2.5e-29 Score=264.57 Aligned_cols=314 Identities=18% Similarity=0.207 Sum_probs=205.1
Q ss_pred CCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHH-HHhhhccccccccCCceEE
Q 010075 11 ENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNV-LKEKWGTRLNSFISEKITF 89 (519)
Q Consensus 11 ~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~-l~~~~~~~~~~~~~~~v~~ 89 (519)
.+|+|||||||||||++|++.|++.| .+|++++|+.......+++.+.+... |.. +... ...++.+
T Consensus 68 ~~~~vlVTGatG~iG~~l~~~L~~~g---~~V~~~~R~~~~~~~~~~l~~~l~~~--~~~~~~~~--------~~~~v~~ 134 (427)
T 4f6c_A 68 PLGNTLLTGATGFLGAYLIEALQGYS---HRIYCFIRADNEEIAWYKLMTNLNDY--FSEETVEM--------MLSNIEV 134 (427)
T ss_dssp CCEEEEEECTTSHHHHHHHHHHTTTE---EEEEEEEECSSHHHHHHHHHHHHHHH--SCHHHHHH--------HHTTEEE
T ss_pred CCCEEEEecCCcHHHHHHHHHHHcCC---CEEEEEECCCChHHHHHHHHHHHHHh--cccccccc--------ccCceEE
Confidence 46799999999999999999998877 78999999988666666666433211 100 0111 1368999
Q ss_pred EeccCCCC-CCCCChhhhHHHHhcCccEEEEcCccCCccccHHHHHHHhHHHHHHHHHHHHhccCCceEEEEecceeecC
Q 010075 90 VPGDISSE-DLGLKDSNLKEELWNELDIMVNSAAITKFDERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAYVAGE 168 (519)
Q Consensus 90 v~gDl~~~-~lgls~~~~~~~l~~~vdiViH~Aa~v~f~~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V~vSTa~v~~~ 168 (519)
+.||++++ .++ ...++|+|||+||......++...+++|+.|+.+++++|.+ +.++|||+||.++ |.
T Consensus 135 v~~Dl~d~~~l~---------~~~~~d~Vih~A~~~~~~~~~~~~~~~Nv~g~~~l~~aa~~--~~~~~v~~SS~~~-G~ 202 (427)
T 4f6c_A 135 IVGDFECMDDVV---------LPENMDTIIHAGARTDHFGDDDEFEKVNVQGTVDVIRLAQQ--HHARLIYVSTISV-GT 202 (427)
T ss_dssp EEECC---CCCC---------CSSCCSEEEECCCCC-------CHHHHHHHHHHHHHHHHHH--TTCEEEEEEEGGG-GS
T ss_pred EeCCCCCcccCC---------CcCCCCEEEECCcccCCCCCHHHHHHHHHHHHHHHHHHHHh--cCCcEEEECchHh-CC
Confidence 99999973 222 45789999999999888788889999999999999999998 6789999999999 54
Q ss_pred cCC-eeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcHHHHHHHHHHHHHHHh-h
Q 010075 169 RTG-LILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLMQQS-K 246 (519)
Q Consensus 169 ~~~-~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~Y~~sK~~aE~lv~~~-~ 246 (519)
... ...+.++.|+.+.. ...+.+.|+.||+++|.+++++ .
T Consensus 203 ~~~~~~~~~~~~E~~~~~--------------------------------------~~~~~~~Y~~sK~~~E~~~~~~~~ 244 (427)
T 4f6c_A 203 YFDIDTEDVTFSEADVYK--------------------------------------GQLLTSPYTRSKFYSELKVLEAVN 244 (427)
T ss_dssp EECSSCSCCEECTTCSCS--------------------------------------SCCCCSHHHHHHHHHHHHHHHHHH
T ss_pred CccCCCCCcccccccccc--------------------------------------CCCCCCchHHHHHHHHHHHHHHHH
Confidence 211 11223333322211 1146789999999999999987 4
Q ss_pred cCCcEEEEecCccccCCCCCCCccccc--ccccHHHHHHhhcCCceeeccCCCceeeeeeHHHHHHHHHHHHHHhccCCC
Q 010075 247 ENLSLVIIRPTVVSGTYKEPFPGWVED--LKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMIVAMVAHAKQPS 324 (519)
Q Consensus 247 ~~lp~~IvRPs~V~g~~~~p~~gw~~~--~~~~~~~i~~~~~g~~~~~~~~~~~~~d~vpVDdva~aii~a~~~~~~~~~ 324 (519)
.+++++++||+.|+|+...+. |..+ .+....++.....+..... ++++..++++||||+|++++.++....
T Consensus 245 ~g~~~~ivRpg~v~G~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~v~v~DvA~ai~~~~~~~~---- 317 (427)
T 4f6c_A 245 NGLDGRIVRVGNLTSPYNGRW--HMRNIKTNRFSMVMNDLLQLDCIGV-SMAEMPVDFSFVDTTARQIVALAQVNT---- 317 (427)
T ss_dssp TTCCEEEEEECCEESCSSSCC--CCTTGGGCHHHHHHHHHHHSSEEEH-HHHTCEECCEEHHHHHHHHHHHTTSCC----
T ss_pred cCCCEEEEeCCeeecCCCCCc--cccCcchHHHHHHHHHHHhcCCCCC-ccccceEEEeeHHHHHHHHHHHHcCCC----
Confidence 689999999999999876432 1111 1223445555555443332 346789999999999999999886432
Q ss_pred CCcEEEecCCCCCchhHHHHHHHHHH------HHHHHHHHHhhhhHHHHHHHHHHhcccccccceEEechhHHHHHHHhc
Q 010075 325 DANIYHVGSSLRNPVTLGLQVANTVF------HNFFKGVYNDLRKKVKFVMRVVEIYKPYFYFNGIFDDTNTEKLRMTAR 398 (519)
Q Consensus 325 ~~~iyni~s~~~~~i~~~~~~~~~~~------p~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~w~F~~~n~~~L~~~l~ 398 (519)
.+++||++++...++..+...+..+. +.+ ...+... +..+ +..+.. ..+......||++++.+.+..+.
T Consensus 318 ~g~~~~l~~~~~~s~~el~~~i~~~g~~~~~~~~~-~~~l~~~-~~~~-~~~~~~--~~~~~~~~~~d~~~~~~~l~~~G 392 (427)
T 4f6c_A 318 PQIIYHVLSPNKMPVKSLLECVKRKEIELVSDESF-NEILQKQ-DMYE-TIGLTS--VDREQQLAMIDTTLTLKIMNHIS 392 (427)
T ss_dssp CCSEEEESCSCCEEHHHHHHHHHSSCCEEECHHHH-HHHHHHT-TCHH-HHHHHH--HHHTSEECEECCHHHHHHHHHTT
T ss_pred CCCEEEecCCCCCcHHHHHHHHHHcCCcccCHHHH-HHHHHhc-Cchh-hhhhhh--ccccCCceeccHHHHHHHHHhcC
Confidence 36899999986555444555554321 111 1111111 1111 111111 12233478899999999888765
Q ss_pred C
Q 010075 399 G 399 (519)
Q Consensus 399 ~ 399 (519)
-
T Consensus 393 ~ 393 (427)
T 4f6c_A 393 E 393 (427)
T ss_dssp C
T ss_pred C
Confidence 4
|
| >4b8w_A GDP-L-fucose synthase; oxidoreductase; HET: NAP GDP; 2.75A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.97 E-value=1.3e-29 Score=254.23 Aligned_cols=242 Identities=14% Similarity=0.081 Sum_probs=177.1
Q ss_pred hcCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceE
Q 010075 9 FLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKIT 88 (519)
Q Consensus 9 ~~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~ 88 (519)
++++|+|||||||||||++|+++|++.|+ +.... ...++
T Consensus 3 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~---------~~~~~--------------------------------~~~~~ 41 (319)
T 4b8w_A 3 YFQSMRILVTGGSGLVGKAIQKVVADGAG---------LPGED--------------------------------WVFVS 41 (319)
T ss_dssp CCCCCEEEEETCSSHHHHHHHHHHHTTTC---------CTTCE--------------------------------EEECC
T ss_pred cccCCeEEEECCCcHHHHHHHHHHHhcCC---------ccccc--------------------------------ccccC
Confidence 46789999999999999999999999874 11100 12345
Q ss_pred EEeccCCCCCCCCChhhhHHHHhcC--ccEEEEcCccCCc----cccHHHHHHHhHHHHHHHHHHHHhccCCceEEEEec
Q 010075 89 FVPGDISSEDLGLKDSNLKEELWNE--LDIMVNSAAITKF----DERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVST 162 (519)
Q Consensus 89 ~v~gDl~~~~lgls~~~~~~~l~~~--vdiViH~Aa~v~f----~~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V~vST 162 (519)
.+.+|+++ .+....++++ +|+|||+||.+.. .++....+++|+.||.+++++|++. ++++|||+||
T Consensus 42 ~~~~D~~d-------~~~~~~~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~-~~~~~v~~SS 113 (319)
T 4b8w_A 42 SKDADLTD-------TAQTRALFEKVQPTHVIHLAAMVGGLFRNIKYNLDFWRKNVHMNDNVLHSAFEV-GARKVVSCLS 113 (319)
T ss_dssp TTTCCTTS-------HHHHHHHHHHSCCSEEEECCCCCCCHHHHTTCHHHHHHHHHHHHHHHHHHHHHT-TCSEEEEECC
T ss_pred ceecccCC-------HHHHHHHHhhcCCCEEEECceecccccccccCHHHHHHHHHHHHHHHHHHHHHc-CCCeEEEEcc
Confidence 56889984 3434466655 9999999998752 3567788999999999999999996 7899999999
Q ss_pred ceeecCcCC-eeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCc-HHHHHHHHHHH
Q 010075 163 AYVAGERTG-LILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPN-TYVFTKTMGEM 240 (519)
Q Consensus 163 a~v~~~~~~-~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n-~Y~~sK~~aE~ 240 (519)
+++|+...+ .++|..... ....+.+ .|+.||+.+|+
T Consensus 114 ~~vyg~~~~~~~~E~~~~~------------------------------------------~~~~p~~~~Y~~sK~~~E~ 151 (319)
T 4b8w_A 114 TCIFPDKTTYPIDETMIHN------------------------------------------GPPHNSNFGYSYAKRMIDV 151 (319)
T ss_dssp GGGSCSSCCSSBCGGGGGB------------------------------------------SCCCSSSHHHHHHHHHHHH
T ss_pred hhhcCCCCCCCcccccccc------------------------------------------CCCCCCcchHHHHHHHHHH
Confidence 999986542 333332100 0012334 69999999999
Q ss_pred HHHHh--hcCCcEEEEecCccccCCCCCCCcccccccccHHHHHH----hhcCCceeeccCCCceeeeeeHHHHHHHHHH
Q 010075 241 LMQQS--KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVA----SAQGNLRCLVGETKVIMDVIPVDMVVNAMIV 314 (519)
Q Consensus 241 lv~~~--~~~lp~~IvRPs~V~g~~~~p~~gw~~~~~~~~~~i~~----~~~g~~~~~~~~~~~~~d~vpVDdva~aii~ 314 (519)
+++.+ ..+++++|+||+.|||+...+.... ......++.. +..|....++++++..+++|||+|+|++++.
T Consensus 152 ~~~~~~~~~~~~~~ilRp~~v~Gp~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~a~~~ 228 (319)
T 4b8w_A 152 QNRAYFQQYGCTFTAVIPTNVFGPHDNFNIED---GHVLPGLIHKVHLAKSSGSALTVWGTGNPRRQFIYSLDLAQLFIW 228 (319)
T ss_dssp HHHHHHHHHCCEEEEEEECEEECTTCCCCTTT---SCHHHHHHHHHHHHHHHTCCEEEESCSCCEECEEEHHHHHHHHHH
T ss_pred HHHHHHHhhCCCEEEEeeccccCCCCCCCCcc---ccccHHHHHHHHHHhccCCceEEeCCCCeeEEEEeHHHHHHHHHH
Confidence 99886 4589999999999999987432211 0122333444 6778777888999999999999999999999
Q ss_pred HHHHhccCCCCCcEEEecCCCCCchhHHHHHH
Q 010075 315 AMVAHAKQPSDANIYHVGSSLRNPVTLGLQVA 346 (519)
Q Consensus 315 a~~~~~~~~~~~~iyni~s~~~~~i~~~~~~~ 346 (519)
++..... ..+++||++++...++..+...+
T Consensus 229 ~~~~~~~--~~~~~~ni~~~~~~s~~e~~~~i 258 (319)
T 4b8w_A 229 VLREYNE--VEPIILSVGEEDEVSIKEAAEAV 258 (319)
T ss_dssp HHHHCCC--SSCEEECCCGGGCEEHHHHHHHH
T ss_pred HHhcccc--CCceEEEecCCCceeHHHHHHHH
Confidence 9976332 23579999998665544444443
|
| >2pk3_A GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, short-chain dehydrogenase/reductase, rossmann fold, oxidoreductase; HET: A2R GDD; 1.82A {Aneurinibacillus thermoaerophilus} | Back alignment and structure |
|---|
Probab=99.97 E-value=6.9e-29 Score=250.49 Aligned_cols=249 Identities=16% Similarity=0.163 Sum_probs=178.8
Q ss_pred cchhhhcCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccc
Q 010075 4 GSVVEFLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFI 83 (519)
Q Consensus 4 ~~i~~~~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~ 83 (519)
+.-..+.+.++|||||||||||++|+++|++.| .+|+++.|+.....
T Consensus 4 ~~~~~~~~~~~vlVTGatG~iG~~l~~~L~~~G---~~V~~~~r~~~~~~------------------------------ 50 (321)
T 2pk3_A 4 SHHHHHHGSMRALITGVAGFVGKYLANHLTEQN---VEVFGTSRNNEAKL------------------------------ 50 (321)
T ss_dssp ---------CEEEEETTTSHHHHHHHHHHHHTT---CEEEEEESCTTCCC------------------------------
T ss_pred cccccccCcceEEEECCCChHHHHHHHHHHHCC---CEEEEEecCCcccc------------------------------
Confidence 333455677999999999999999999999988 68899999754210
Q ss_pred CCceEEEeccCCCCCCCCChhhhHHHHhcC--ccEEEEcCccCCcc---ccHHHHHHHhHHHHHHHHHHHHhccCCceEE
Q 010075 84 SEKITFVPGDISSEDLGLKDSNLKEELWNE--LDIMVNSAAITKFD---ERYDVAFGINTLGVIHLVNFAKKCVKLKVFV 158 (519)
Q Consensus 84 ~~~v~~v~gDl~~~~lgls~~~~~~~l~~~--vdiViH~Aa~v~f~---~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V 158 (519)
-++.++.+|+++ .+....++++ +|+|||+||..... ++++..+++|+.|+.+++++|+++++.++||
T Consensus 51 -l~~~~~~~Dl~d-------~~~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~~~iv 122 (321)
T 2pk3_A 51 -PNVEMISLDIMD-------SQRVKKVISDIKPDYIFHLAAKSSVKDSWLNKKGTFSTNVFGTLHVLDAVRDSNLDCRIL 122 (321)
T ss_dssp -TTEEEEECCTTC-------HHHHHHHHHHHCCSEEEECCSCCCHHHHTTCHHHHHHHHHHHHHHHHHHHHHHTCCCEEE
T ss_pred -ceeeEEECCCCC-------HHHHHHHHHhcCCCEEEEcCcccchhhhhhcHHHHHHHHHHHHHHHHHHHHHhCCCCeEE
Confidence 057889999995 3333455554 99999999987642 4678889999999999999998765689999
Q ss_pred EEecceeecCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcHHHHHHHHH
Q 010075 159 HVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMG 238 (519)
Q Consensus 159 ~vSTa~v~~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~Y~~sK~~a 238 (519)
|+||..+|+... -...+++|+.+. .+.+.|+.||+.+
T Consensus 123 ~~SS~~v~g~~~--~~~~~~~E~~~~-----------------------------------------~~~~~Y~~sK~~~ 159 (321)
T 2pk3_A 123 TIGSSEEYGMIL--PEESPVSEENQL-----------------------------------------RPMSPYGVSKASV 159 (321)
T ss_dssp EEEEGGGTBSCC--GGGCSBCTTSCC-----------------------------------------BCCSHHHHHHHHH
T ss_pred EEccHHhcCCCC--CCCCCCCCCCCC-----------------------------------------CCCCccHHHHHHH
Confidence 999999998531 011223222221 3467899999999
Q ss_pred HHHHHHh--hcCCcEEEEecCccccCCCCCCCcccccccccHHHHHHhhc---C--CceeeccCCCceeeeeeHHHHHHH
Q 010075 239 EMLMQQS--KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQ---G--NLRCLVGETKVIMDVIPVDMVVNA 311 (519)
Q Consensus 239 E~lv~~~--~~~lp~~IvRPs~V~g~~~~p~~gw~~~~~~~~~~i~~~~~---g--~~~~~~~~~~~~~d~vpVDdva~a 311 (519)
|.+++.+ ..+++++++||+.|||+...+ .+ ....++..+.. | ......++++...++++++|+|++
T Consensus 160 E~~~~~~~~~~gi~~~ilrp~~v~g~~~~~-~~------~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~v~v~Dva~a 232 (321)
T 2pk3_A 160 GMLARQYVKAYGMDIIHTRTFNHIGPGQSL-GF------VTQDFAKQIVDIEMEKQEPIIKVGNLEAVRDFTDVRDIVQA 232 (321)
T ss_dssp HHHHHHHHHHHCCEEEEEEECEEECTTCCT-TS------HHHHHHHHHHHHHTTSSCSEEEESCSSCEEEEEEHHHHHHH
T ss_pred HHHHHHHHHHcCCCEEEEEeCcccCcCCCC-Cc------hHHHHHHHHHHHhcCCCCCeEEeCCCCcEEeeEEHHHHHHH
Confidence 9999876 348999999999999987632 11 12233444333 6 344567888899999999999999
Q ss_pred HHHHHHHhccCCCCCcEEEecCCCCCchhHHHHHHH
Q 010075 312 MIVAMVAHAKQPSDANIYHVGSSLRNPVTLGLQVAN 347 (519)
Q Consensus 312 ii~a~~~~~~~~~~~~iyni~s~~~~~i~~~~~~~~ 347 (519)
++.++.... .+++||++++...++..+...+.
T Consensus 233 ~~~~~~~~~----~g~~~~i~~~~~~s~~e~~~~i~ 264 (321)
T 2pk3_A 233 YWLLSQYGK----TGDVYNVCSGIGTRIQDVLDLLL 264 (321)
T ss_dssp HHHHHHHCC----TTCEEEESCSCEEEHHHHHHHHH
T ss_pred HHHHHhCCC----CCCeEEeCCCCCeeHHHHHHHHH
Confidence 999987541 25799999986555444444443
|
| >1rkx_A CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; 1.80A {Yersinia pseudotuberculosis} SCOP: c.2.1.2 PDB: 1wvg_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=5e-29 Score=255.58 Aligned_cols=257 Identities=14% Similarity=0.135 Sum_probs=183.8
Q ss_pred hhcCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCce
Q 010075 8 EFLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKI 87 (519)
Q Consensus 8 ~~~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v 87 (519)
+++++|+|||||||||||++|+++|++.| .+|+++.|+........+ . +. ...++
T Consensus 5 ~~~~~~~vlVtGatG~iG~~l~~~L~~~g---~~V~~~~r~~~~~~~~~~---~---------~~----------~~~~~ 59 (357)
T 1rkx_A 5 SFWQGKRVFVTGHTGFKGGWLSLWLQTMG---ATVKGYSLTAPTVPSLFE---T---------AR----------VADGM 59 (357)
T ss_dssp HHHTTCEEEEETTTSHHHHHHHHHHHHTT---CEEEEEESSCSSSSCHHH---H---------TT----------TTTTS
T ss_pred hhhCCCEEEEECCCchHHHHHHHHHHhCC---CeEEEEeCCCcccchhhH---h---------hc----------cCCce
Confidence 56889999999999999999999999988 688999997654321110 0 00 02578
Q ss_pred EEEeccCCCCCCCCChhhhHHHHhcC--ccEEEEcCccCCc---cccHHHHHHHhHHHHHHHHHHHHhccCCceEEEEec
Q 010075 88 TFVPGDISSEDLGLKDSNLKEELWNE--LDIMVNSAAITKF---DERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVST 162 (519)
Q Consensus 88 ~~v~gDl~~~~lgls~~~~~~~l~~~--vdiViH~Aa~v~f---~~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V~vST 162 (519)
+++.+|+++ .+....++++ +|+|||+||.... .+.+...+++|+.|+.+++++|.+++++++|||+||
T Consensus 60 ~~~~~Dl~d-------~~~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~v~~SS 132 (357)
T 1rkx_A 60 QSEIGDIRD-------QNKLLESIREFQPEIVFHMAAQPLVRLSYSEPVETYSTNVMGTVYLLEAIRHVGGVKAVVNITS 132 (357)
T ss_dssp EEEECCTTC-------HHHHHHHHHHHCCSEEEECCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHHCCCCEEEEECC
T ss_pred EEEEccccC-------HHHHHHHHHhcCCCEEEECCCCcccccchhCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEecC
Confidence 999999995 3333455554 8999999996432 245678899999999999999998744899999999
Q ss_pred ceeecCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcHHHHHHHHHHHHH
Q 010075 163 AYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLM 242 (519)
Q Consensus 163 a~v~~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~Y~~sK~~aE~lv 242 (519)
.++|+...+ ..++.|+.+. .+.+.|+.||+.+|+++
T Consensus 133 ~~vyg~~~~---~~~~~E~~~~-----------------------------------------~~~~~Y~~sK~~~e~~~ 168 (357)
T 1rkx_A 133 DKCYDNKEW---IWGYRENEAM-----------------------------------------GGYDPYSNSKGCAELVT 168 (357)
T ss_dssp GGGBCCCCS---SSCBCTTSCB-----------------------------------------CCSSHHHHHHHHHHHHH
T ss_pred HHHhCCCCc---CCCCCCCCCC-----------------------------------------CCCCccHHHHHHHHHHH
Confidence 999986532 0112221111 35678999999999999
Q ss_pred HHhh-----------cCCcEEEEecCccccCCCCCCCcccccccccHHHHHHhhcCCceeeccCCCceeeeeeHHHHHHH
Q 010075 243 QQSK-----------ENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNA 311 (519)
Q Consensus 243 ~~~~-----------~~lp~~IvRPs~V~g~~~~p~~gw~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~d~vpVDdva~a 311 (519)
+.+. .+++++++||+.|||+...+.. .....++..+..|....+ ++++..+++|||+|+|++
T Consensus 169 ~~~~~~~~~~~~~~~~gi~~~~lrp~~v~G~~~~~~~------~~~~~~~~~~~~g~~~~~-~~~~~~~~~v~v~Dva~a 241 (357)
T 1rkx_A 169 SSYRNSFFNPANYGQHGTAVATVRAGNVIGGGDWALD------RIVPDILRAFEQSQPVII-RNPHAIRPWQHVLEPLSG 241 (357)
T ss_dssp HHHHHHHSCGGGHHHHCCEEEEEECCCEECTTCCCSS------CHHHHHHHHHHTTCCEEC-SCTTCEECCEETHHHHHH
T ss_pred HHHHHHHhhhhccccCCceEEEEeeceeeCCCCCccc------cHHHHHHHHHhcCCCEEE-CCCCCeeccEeHHHHHHH
Confidence 8762 2899999999999998652211 233445666666765544 456788999999999999
Q ss_pred HHHHHHHhc-cCCCCCcEEEecCCCCCchhH--HHHHHH
Q 010075 312 MIVAMVAHA-KQPSDANIYHVGSSLRNPVTL--GLQVAN 347 (519)
Q Consensus 312 ii~a~~~~~-~~~~~~~iyni~s~~~~~i~~--~~~~~~ 347 (519)
++.++.... .....+++||++++...++++ +...+.
T Consensus 242 ~~~~~~~~~~~~~~~~~~~ni~~~~~~~~s~~e~~~~i~ 280 (357)
T 1rkx_A 242 YLLLAQKLYTDGAEYAEGWNFGPNDADATPVKNIVEQMV 280 (357)
T ss_dssp HHHHHHHHHHTCGGGCSEEECCCCGGGCEEHHHHHHHHH
T ss_pred HHHHHHhhhhcCCCCCceEEECCCCCCcccHHHHHHHHH
Confidence 999887421 101125799999853233333 444443
|
| >2c20_A UDP-glucose 4-epimerase; carbohydrate metabolism, galactose metabolism, isomerase, NAD, spine; HET: NAD; 2.7A {Bacillus anthracis} | Back alignment and structure |
|---|
Probab=99.97 E-value=3.8e-28 Score=246.04 Aligned_cols=250 Identities=19% Similarity=0.231 Sum_probs=180.0
Q ss_pred CEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEEec
Q 010075 13 KTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVPG 92 (519)
Q Consensus 13 k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v~g 92 (519)
|+|||||||||||++|+++|++.| .+|+++.|...... +. +..+++++.+
T Consensus 2 ~~ilVtGatG~iG~~l~~~L~~~g---~~V~~~~r~~~~~~--~~-------------------------~~~~~~~~~~ 51 (330)
T 2c20_A 2 NSILICGGAGYIGSHAVKKLVDEG---LSVVVVDNLQTGHE--DA-------------------------ITEGAKFYNG 51 (330)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTT---CEEEEEECCSSCCG--GG-------------------------SCTTSEEEEC
T ss_pred CEEEEECCCcHHHHHHHHHHHhCC---CEEEEEeCCCcCch--hh-------------------------cCCCcEEEEC
Confidence 689999999999999999999988 68899998754321 00 1236889999
Q ss_pred cCCCCCCCCChhhhHHHHhc--CccEEEEcCccCCcc---ccHHHHHHHhHHHHHHHHHHHHhccCCceEEEEecceeec
Q 010075 93 DISSEDLGLKDSNLKEELWN--ELDIMVNSAAITKFD---ERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAYVAG 167 (519)
Q Consensus 93 Dl~~~~lgls~~~~~~~l~~--~vdiViH~Aa~v~f~---~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V~vSTa~v~~ 167 (519)
|+++ .+....+++ ++|+|||+||..... ++.+..+++|+.|+.+++++|++. ++++|||+||.++|+
T Consensus 52 D~~~-------~~~~~~~~~~~~~d~vih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~-~~~~~v~~Ss~~~~~ 123 (330)
T 2c20_A 52 DLRD-------KAFLRDVFTQENIEAVMHFAADSLVGVSMEKPLQYYNNNVYGALCLLEVMDEF-KVDKFIFSSTAATYG 123 (330)
T ss_dssp CTTC-------HHHHHHHHHHSCEEEEEECCCCCCHHHHHHSHHHHHHHHHHHHHHHHHHHHHT-TCCEEEEECCGGGGC
T ss_pred CCCC-------HHHHHHHHhhcCCCEEEECCcccCccccccCHHHHHHHHhHHHHHHHHHHHHc-CCCEEEEeCCceeeC
Confidence 9995 333446666 899999999987543 467788999999999999999986 789999999999998
Q ss_pred CcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcHHHHHHHHHHHHHHHh--
Q 010075 168 ERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLMQQS-- 245 (519)
Q Consensus 168 ~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~Y~~sK~~aE~lv~~~-- 245 (519)
...+ .+++|+.+. .+.+.|+.||+.+|++++.+
T Consensus 124 ~~~~----~~~~E~~~~-----------------------------------------~~~~~Y~~sK~~~e~~~~~~~~ 158 (330)
T 2c20_A 124 EVDV----DLITEETMT-----------------------------------------NPTNTYGETKLAIEKMLHWYSQ 158 (330)
T ss_dssp SCSS----SSBCTTSCC-----------------------------------------CCSSHHHHHHHHHHHHHHHHHH
T ss_pred CCCC----CCCCcCCCC-----------------------------------------CCCChHHHHHHHHHHHHHHHHH
Confidence 6431 223222221 34688999999999999887
Q ss_pred hcCCcEEEEecCccccCCCCCCCccccc-ccccHHHHHHhhc--CCceeecc------CCCceeeeeeHHHHHHHHHHHH
Q 010075 246 KENLSLVIIRPTVVSGTYKEPFPGWVED-LKTINTLFVASAQ--GNLRCLVG------ETKVIMDVIPVDMVVNAMIVAM 316 (519)
Q Consensus 246 ~~~lp~~IvRPs~V~g~~~~p~~gw~~~-~~~~~~~i~~~~~--g~~~~~~~------~~~~~~d~vpVDdva~aii~a~ 316 (519)
..+++++++||+.|||+......|..+. .......+..... +....+++ +++..+++|||+|+|++++.++
T Consensus 159 ~~~~~~~ilrp~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~v~v~Dva~a~~~~~ 238 (330)
T 2c20_A 159 ASNLRYKIFRYFNVAGATPNGIIGEDHRPETHLIPLVLQVALGQREKIMMFGDDYNTPDGTCIRDYIHVEDLVAAHFLGL 238 (330)
T ss_dssp TSSCEEEEEECSEEECCCTTCSSCCCCSSCCSHHHHHHHHHTTSSSCEEEECSCCSSSSSSCEECEEEHHHHHHHHHHHH
T ss_pred HhCCcEEEEecCcccCCCCcCccccccccccchHHHHHHHHhhcCCCeEEeCCccccCCCceeEeeEeHHHHHHHHHHHH
Confidence 3489999999999999864322221111 1122233333333 33344454 6788999999999999999998
Q ss_pred HHhccCCCCCcEEEecCCCCCchhHHHHHH
Q 010075 317 VAHAKQPSDANIYHVGSSLRNPVTLGLQVA 346 (519)
Q Consensus 317 ~~~~~~~~~~~iyni~s~~~~~i~~~~~~~ 346 (519)
...... ..+++||++++...++..+...+
T Consensus 239 ~~~~~~-~~~~~~ni~~~~~~s~~e~~~~i 267 (330)
T 2c20_A 239 KDLQNG-GESDFYNLGNGNGFSVKEIVDAV 267 (330)
T ss_dssp HHHHTT-CCCEEEECCCTTCBCHHHHHHHH
T ss_pred hccccC-CCCCeEEeCCCCCccHHHHHHHH
Confidence 754322 12579999998665544444433
|
| >1i24_A Sulfolipid biosynthesis protein SQD1; SDR, short-chain dehydrogenase/reductase, rossmann fold, BIO protein; HET: NAD UPG; 1.20A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1i2c_A* 1i2b_A* 1qrr_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=8.2e-29 Score=257.95 Aligned_cols=275 Identities=13% Similarity=0.070 Sum_probs=182.7
Q ss_pred hhcCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccH--------------HHHHHHHHhhhhhHHHHHh
Q 010075 8 EFLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSA--------------ALRFQNEVLAKDVFNVLKE 73 (519)
Q Consensus 8 ~~~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~--------------~~rl~~~~~~~~~f~~l~~ 73 (519)
.+.++++|||||||||||++|+++|++.| .+|+++.|....... .+++. .+..
T Consensus 7 ~~~~~~~vlVTG~tGfIG~~l~~~L~~~G---~~V~~~~r~~~~~~~~~~~~~~~~~~~~l~~~~~----------~~~~ 73 (404)
T 1i24_A 7 HHHHGSRVMVIGGDGYCGWATALHLSKKN---YEVCIVDNLVRRLFDHQLGLESLTPIASIHDRIS----------RWKA 73 (404)
T ss_dssp -----CEEEEETTTSHHHHHHHHHHHHTT---CEEEEEECCHHHHHHHHHTCCCSSCCCCHHHHHH----------HHHH
T ss_pred cccCCCeEEEeCCCcHHHHHHHHHHHhCC---CeEEEEEecCccccccccccccccccchhhhhhh----------hHhh
Confidence 45788999999999999999999999998 678999875322100 11111 0000
Q ss_pred hhccccccccCCceEEEeccCCCCCCCCChhhhHHHHhcC--ccEEEEcCccCCcc---ccH---HHHHHHhHHHHHHHH
Q 010075 74 KWGTRLNSFISEKITFVPGDISSEDLGLKDSNLKEELWNE--LDIMVNSAAITKFD---ERY---DVAFGINTLGVIHLV 145 (519)
Q Consensus 74 ~~~~~~~~~~~~~v~~v~gDl~~~~lgls~~~~~~~l~~~--vdiViH~Aa~v~f~---~~~---~~~~~~Nv~gt~~ll 145 (519)
. ...+++++.+|+++ .+....++++ +|+|||+||..... ++. ...+++|+.||.+++
T Consensus 74 ~--------~~~~v~~~~~Dl~d-------~~~~~~~~~~~~~D~Vih~A~~~~~~~~~~~~~~~~~~~~~Nv~gt~~ll 138 (404)
T 1i24_A 74 L--------TGKSIELYVGDICD-------FEFLAESFKSFEPDSVVHFGEQRSAPYSMIDRSRAVYTQHNNVIGTLNVL 138 (404)
T ss_dssp H--------HCCCCEEEESCTTS-------HHHHHHHHHHHCCSEEEECCSCCCHHHHTSCHHHHHHHHHHHHHHHHHHH
T ss_pred c--------cCCceEEEECCCCC-------HHHHHHHHhccCCCEEEECCCCCCccchhhCccchhhhHHHHHHHHHHHH
Confidence 0 12578999999995 3334466665 99999999986532 122 347899999999999
Q ss_pred HHHHhccCC-ceEEEEecceeecCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhcccccccc
Q 010075 146 NFAKKCVKL-KVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKL 224 (519)
Q Consensus 146 ~~a~~~~~l-~~~V~vSTa~v~~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~ 224 (519)
++|++. +. ++|||+||+++|+.....++|..+++.... . + ......
T Consensus 139 ~a~~~~-~~~~~~V~~SS~~vyg~~~~~~~E~~~~~~~~~-~-------------------~------------~~~~~~ 185 (404)
T 1i24_A 139 FAIKEF-GEECHLVKLGTMGEYGTPNIDIEEGYITITHNG-R-------------------T------------DTLPYP 185 (404)
T ss_dssp HHHHHH-CTTCEEEEECCGGGGCCCSSCBCSSEEEEEETT-E-------------------E------------EEEECC
T ss_pred HHHHHh-CCCcEEEEeCcHHHhCCCCCCCCcccccccccc-c-------------------c------------ccccCC
Confidence 999986 55 599999999999865444444322100000 0 0 000001
Q ss_pred CCCCcHHHHHHHHHHHHHHHh--hcCCcEEEEecCccccCCCCC---CCcccccc-------cccHHHHHHhhcCCceee
Q 010075 225 HGWPNTYVFTKTMGEMLMQQS--KENLSLVIIRPTVVSGTYKEP---FPGWVEDL-------KTINTLFVASAQGNLRCL 292 (519)
Q Consensus 225 ~~~~n~Y~~sK~~aE~lv~~~--~~~lp~~IvRPs~V~g~~~~p---~~gw~~~~-------~~~~~~i~~~~~g~~~~~ 292 (519)
..+.+.|+.||+.+|.+++.+ ..+++++++||+.|||+...+ .++|+... ..+..++..+..|....+
T Consensus 186 ~~~~~~Y~~sK~~~e~~~~~~~~~~gi~~~ivrp~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 265 (404)
T 1i24_A 186 KQASSFYHLSKVHDSHNIAFTCKAWGIRATDLNQGVVYGVKTDETEMHEELRNRLDYDAVFGTALNRFCVQAAVGHPLTV 265 (404)
T ss_dssp CCCCSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEECSCCTTGGGSGGGCCCCCCSTTTCCHHHHHHHHHHHTCCEEE
T ss_pred CCCCChhHHHHHHHHHHHHHHHHhcCCeEEEEecceeeCCCCCccccccccccccccccchhhHHHHHHHHHHcCCeeEE
Confidence 245678999999999999876 348999999999999997643 12232211 234556667777877677
Q ss_pred ccCCCceeeeeeHHHHHHHHHHHHHHhccCCCCCcEEEecCCCCCchhHHHHH
Q 010075 293 VGETKVIMDVIPVDMVVNAMIVAMVAHAKQPSDANIYHVGSSLRNPVTLGLQV 345 (519)
Q Consensus 293 ~~~~~~~~d~vpVDdva~aii~a~~~~~~~~~~~~iyni~s~~~~~i~~~~~~ 345 (519)
+++++..+++|||+|+|++++.++..... .+..++||+++ ...++..+...
T Consensus 266 ~g~g~~~~~~i~v~Dva~a~~~~l~~~~~-~g~~~~yni~~-~~~s~~e~~~~ 316 (404)
T 1i24_A 266 YGKGGQTRGYLDIRDTVQCVEIAIANPAK-AGEFRVFNQFT-EQFSVNELASL 316 (404)
T ss_dssp ETTSCCEEEEEEHHHHHHHHHHHHHSCCC-TTCEEEEEECS-EEEEHHHHHHH
T ss_pred eCCCCceECcEEHHHHHHHHHHHHhCccc-CCCceEEEECC-CCCcHHHHHHH
Confidence 88999999999999999999999874321 11126999987 44343333333
|
| >1r6d_A TDP-glucose-4,6-dehydratase; rossmann fold, short-chain dehydrogenase/reductase, lyase; HET: NAD DAU; 1.35A {Streptomyces venezuelae} SCOP: c.2.1.2 PDB: 1r66_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=1.5e-28 Score=249.98 Aligned_cols=249 Identities=21% Similarity=0.289 Sum_probs=183.1
Q ss_pred CEEEEeCCccHHHHHHHHHHHHh-CCCc--cEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 010075 13 KTILVSGVTGFVAKVFIEKILRV-QPNV--KKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (519)
Q Consensus 13 k~VlITGaTGFlG~~Lv~~LL~~-g~~v--~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (519)
|+|||||||||||++|+++|++. ++++ .+|+++.|....... +++. . +. ...++++
T Consensus 1 M~vlVTGatG~iG~~l~~~L~~~~~~g~~~~~V~~~~r~~~~~~~-~~~~-------------~-----~~--~~~~~~~ 59 (337)
T 1r6d_A 1 MRLLVTGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSLTYAGNR-ANLA-------------P-----VD--ADPRLRF 59 (337)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTSCTTSCCSEEEEEECCCTTCCG-GGGG-------------G-----GT--TCTTEEE
T ss_pred CeEEEECCccHHHHHHHHHHHhhhcCCCCceEEEEEECCCccCch-hhhh-------------h-----cc--cCCCeEE
Confidence 57999999999999999999995 4432 588999996532111 0100 0 00 0257899
Q ss_pred EeccCCCCCCCCChhhhHHHHhcCccEEEEcCccCCcc---ccHHHHHHHhHHHHHHHHHHHHhccCCceEEEEecceee
Q 010075 90 VPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKFD---ERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAYVA 166 (519)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~~~vdiViH~Aa~v~f~---~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V~vSTa~v~ 166 (519)
+.+|+++ .+....++.++|+|||+||..... ++.+..+++|+.|+.+++++|.+. ++++|||+||.++|
T Consensus 60 ~~~Dl~d-------~~~~~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~Nv~~~~~l~~a~~~~-~~~~~v~~SS~~vy 131 (337)
T 1r6d_A 60 VHGDIRD-------AGLLARELRGVDAIVHFAAESHVDRSIAGASVFTETNVQGTQTLLQCAVDA-GVGRVVHVSTNQVY 131 (337)
T ss_dssp EECCTTC-------HHHHHHHTTTCCEEEECCSCCCHHHHHHCCHHHHHHHTHHHHHHHHHHHHT-TCCEEEEEEEGGGG
T ss_pred EEcCCCC-------HHHHHHHhcCCCEEEECCCccCchhhhhCHHHHHHHHHHHHHHHHHHHHHc-CCCEEEEecchHHh
Confidence 9999995 344457778999999999986542 456678999999999999999986 78899999999999
Q ss_pred cCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcHHHHHHHHHHHHHHHh-
Q 010075 167 GERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLMQQS- 245 (519)
Q Consensus 167 ~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~Y~~sK~~aE~lv~~~- 245 (519)
+...+ .+++|+.+. .+.+.|+.||+.+|++++.+
T Consensus 132 g~~~~----~~~~E~~~~-----------------------------------------~~~~~Y~~sK~~~e~~~~~~~ 166 (337)
T 1r6d_A 132 GSIDS----GSWTESSPL-----------------------------------------EPNSPYAASKAGSDLVARAYH 166 (337)
T ss_dssp CCCSS----SCBCTTSCC-----------------------------------------CCCSHHHHHHHHHHHHHHHHH
T ss_pred CCCCC----CCCCCCCCC-----------------------------------------CCCCchHHHHHHHHHHHHHHH
Confidence 86421 222222221 34678999999999999876
Q ss_pred -hcCCcEEEEecCccccCCCCCCCcccccccccHHHHHHhhcCCceeeccCCCceeeeeeHHHHHHHHHHHHHHhccCCC
Q 010075 246 -KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMIVAMVAHAKQPS 324 (519)
Q Consensus 246 -~~~lp~~IvRPs~V~g~~~~p~~gw~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~d~vpVDdva~aii~a~~~~~~~~~ 324 (519)
..+++++++||+.|||+...+ . .....++..+..|....++++++..++++|++|+|++++.++....
T Consensus 167 ~~~g~~~~ilrp~~v~G~~~~~-~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~~~~~~---- 235 (337)
T 1r6d_A 167 RTYGLDVRITRCCNNYGPYQHP-E------KLIPLFVTNLLDGGTLPLYGDGANVREWVHTDDHCRGIALVLAGGR---- 235 (337)
T ss_dssp HHHCCCEEEEEECEEECTTCCT-T------SHHHHHHHHHHTTCCEEEETTSCCEEEEEEHHHHHHHHHHHHHHCC----
T ss_pred HHHCCCEEEEEeeeeECCCCCC-C------ChHHHHHHHHhcCCCcEEeCCCCeeEeeEeHHHHHHHHHHHHhCCC----
Confidence 358999999999999987632 1 1233455566667666677888899999999999999999886432
Q ss_pred CCcEEEecCCCCCchhHHHHHH
Q 010075 325 DANIYHVGSSLRNPVTLGLQVA 346 (519)
Q Consensus 325 ~~~iyni~s~~~~~i~~~~~~~ 346 (519)
.+++||++++...++..+...+
T Consensus 236 ~g~~~~v~~~~~~s~~e~~~~i 257 (337)
T 1r6d_A 236 AGEIYHIGGGLELTNRELTGIL 257 (337)
T ss_dssp TTCEEEECCCCEEEHHHHHHHH
T ss_pred CCCEEEeCCCCCccHHHHHHHH
Confidence 2679999998555543344333
|
| >3ehe_A UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC, ST genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; HET: NAD; 1.87A {Archaeoglobus fulgidus} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.97 E-value=8.2e-29 Score=249.33 Aligned_cols=238 Identities=19% Similarity=0.236 Sum_probs=177.3
Q ss_pred CEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEEec
Q 010075 13 KTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVPG 92 (519)
Q Consensus 13 k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v~g 92 (519)
|+|||||||||||++|+++|++.| . ++++.|...... .....++.++.+
T Consensus 2 ~~vlVTGatG~iG~~l~~~L~~~g---~-~v~~~~~~~~~~---------------------------~~~~~~~~~~~~ 50 (313)
T 3ehe_A 2 SLIVVTGGAGFIGSHVVDKLSESN---E-IVVIDNLSSGNE---------------------------EFVNEAARLVKA 50 (313)
T ss_dssp -CEEEETTTSHHHHHHHHHHTTTS---C-EEEECCCSSCCG---------------------------GGSCTTEEEECC
T ss_pred CEEEEECCCchHHHHHHHHHHhCC---C-EEEEEcCCCCCh---------------------------hhcCCCcEEEEC
Confidence 589999999999999999999987 3 344444332210 011367899999
Q ss_pred cCCCCCCCCChhhhHHHHhcCccEEEEcCccCCc---cccHHHHHHHhHHHHHHHHHHHHhccCCceEEEEecceeecCc
Q 010075 93 DISSEDLGLKDSNLKEELWNELDIMVNSAAITKF---DERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAYVAGER 169 (519)
Q Consensus 93 Dl~~~~lgls~~~~~~~l~~~vdiViH~Aa~v~f---~~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V~vSTa~v~~~~ 169 (519)
|+++ .+. ..+++++|+|||+|+.... .++++..+++|+.|+.+++++|++. +.++|||+||..+|+..
T Consensus 51 Dl~~-------~~~-~~~~~~~d~vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~-~~~~iv~~SS~~vyg~~ 121 (313)
T 3ehe_A 51 DLAA-------DDI-KDYLKGAEEVWHIAANPDVRIGAENPDEIYRNNVLATYRLLEAMRKA-GVSRIVFTSTSTVYGEA 121 (313)
T ss_dssp CTTT-------SCC-HHHHTTCSEEEECCCCCCCC-CCCCHHHHHHHHHHHHHHHHHHHHHH-TCCEEEEECCGGGGCSC
T ss_pred cCCh-------HHH-HHHhcCCCEEEECCCCCChhhhhhCHHHHHHHHHHHHHHHHHHHHHc-CCCeEEEeCchHHhCcC
Confidence 9983 222 3667799999999997533 3678889999999999999999986 78899999999999865
Q ss_pred CCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcHHHHHHHHHHHHHHHh--hc
Q 010075 170 TGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLMQQS--KE 247 (519)
Q Consensus 170 ~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~Y~~sK~~aE~lv~~~--~~ 247 (519)
.+ .+++|+.+. .+.+.|+.||+.+|.+++.+ ..
T Consensus 122 ~~----~~~~E~~~~-----------------------------------------~~~~~Y~~sK~~~e~~~~~~~~~~ 156 (313)
T 3ehe_A 122 KV----IPTPEDYPT-----------------------------------------HPISLYGASKLACEALIESYCHTF 156 (313)
T ss_dssp SS----SSBCTTSCC-----------------------------------------CCCSHHHHHHHHHHHHHHHHHHHT
T ss_pred CC----CCCCCCCCC-----------------------------------------CCCCHHHHHHHHHHHHHHHHHHhc
Confidence 42 222222221 45678999999999999987 45
Q ss_pred CCcEEEEecCccccCCCCCCCcccccccccHHHHHHhhcC-CceeeccCCCceeeeeeHHHHHHHHHHHHHHhccCCCCC
Q 010075 248 NLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQG-NLRCLVGETKVIMDVIPVDMVVNAMIVAMVAHAKQPSDA 326 (519)
Q Consensus 248 ~lp~~IvRPs~V~g~~~~p~~gw~~~~~~~~~~i~~~~~g-~~~~~~~~~~~~~d~vpVDdva~aii~a~~~~~~~~~~~ 326 (519)
+++++++||+.|||+...+ + .+..++..+..+ ....+.++++..+++|||+|+|++++.++.. ...+
T Consensus 157 g~~~~ilRp~~v~G~~~~~--~------~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~a~~~~~~~----~~~~ 224 (313)
T 3ehe_A 157 DMQAWIYRFANVIGRRSTH--G------VIYDFIMKLKRNPEELEILGNGEQNKSYIYISDCVDAMLFGLRG----DERV 224 (313)
T ss_dssp TCEEEEEECSCEESTTCCC--S------HHHHHHHHHHHCTTEEEESTTSCCEECCEEHHHHHHHHHHHTTC----CSSE
T ss_pred CCCEEEEeeccccCcCCCc--C------hHHHHHHHHHcCCCceEEeCCCCeEEeEEEHHHHHHHHHHHhcc----CCCC
Confidence 8999999999999987632 2 233455555555 4455778999999999999999999998861 1236
Q ss_pred cEEEecCCCCCchhHHHHHHH
Q 010075 327 NIYHVGSSLRNPVTLGLQVAN 347 (519)
Q Consensus 327 ~iyni~s~~~~~i~~~~~~~~ 347 (519)
++||++++...++..+...+.
T Consensus 225 ~~~ni~~~~~~s~~e~~~~i~ 245 (313)
T 3ehe_A 225 NIFNIGSEDQIKVKRIAEIVC 245 (313)
T ss_dssp EEEECCCSCCEEHHHHHHHHH
T ss_pred ceEEECCCCCeeHHHHHHHHH
Confidence 899999987666544554443
|
| >1ek6_A UDP-galactose 4-epimerase; short-chain dehydrogenase, galactosemia, isomerase; HET: NAI UPG; 1.50A {Homo sapiens} SCOP: c.2.1.2 PDB: 1ek5_A* 1hzj_A* 1i3k_A* 1i3l_A* 1i3m_A* 1i3n_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=6.5e-28 Score=246.12 Aligned_cols=257 Identities=19% Similarity=0.211 Sum_probs=179.3
Q ss_pred CCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCc-------ccHHHHHHHHHhhhhhHHHHHhhhccccccccC
Q 010075 12 NKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADI-------DSAALRFQNEVLAKDVFNVLKEKWGTRLNSFIS 84 (519)
Q Consensus 12 ~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~-------~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~ 84 (519)
+|+|||||||||||++|+++|++.| .+|+++.|.... ....+++. +.. .
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~~g---~~V~~~~r~~~~~r~~~~~~~~~~~l~-------------~~~--------~ 57 (348)
T 1ek6_A 2 AEKVLVTGGAGYIGSHTVLELLEAG---YLPVVIDNFHNAFRGGGSLPESLRRVQ-------------ELT--------G 57 (348)
T ss_dssp CSEEEEETTTSHHHHHHHHHHHHTT---CCEEEEECSSSSCBCSSSSBHHHHHHH-------------HHH--------T
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCC---CEEEEEecCCcccccccccHHHHHHHH-------------hcc--------C
Confidence 5799999999999999999999988 578899886543 22222221 100 2
Q ss_pred CceEEEeccCCCCCCCCChhhhHHHHhc--CccEEEEcCccCCcc---ccHHHHHHHhHHHHHHHHHHHHhccCCceEEE
Q 010075 85 EKITFVPGDISSEDLGLKDSNLKEELWN--ELDIMVNSAAITKFD---ERYDVAFGINTLGVIHLVNFAKKCVKLKVFVH 159 (519)
Q Consensus 85 ~~v~~v~gDl~~~~lgls~~~~~~~l~~--~vdiViH~Aa~v~f~---~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V~ 159 (519)
.+++++.+|+++ .+....+++ ++|+|||+||..... ++.+..+++|+.|+.+++++|++. ++++|||
T Consensus 58 ~~~~~~~~D~~~-------~~~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~iv~ 129 (348)
T 1ek6_A 58 RSVEFEEMDILD-------QGALQRLFKKYSFMAVIHFAGLKAVGESVQKPLDYYRVNLTGTIQLLEIMKAH-GVKNLVF 129 (348)
T ss_dssp CCCEEEECCTTC-------HHHHHHHHHHCCEEEEEECCSCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHT-TCCEEEE
T ss_pred CceEEEECCCCC-------HHHHHHHHHhcCCCEEEECCCCcCccchhhchHHHHHHHHHHHHHHHHHHHHh-CCCEEEE
Confidence 578899999995 333446666 799999999986542 466788999999999999999986 7899999
Q ss_pred EecceeecCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCC-CcHHHHHHHHH
Q 010075 160 VSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGW-PNTYVFTKTMG 238 (519)
Q Consensus 160 vSTa~v~~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~-~n~Y~~sK~~a 238 (519)
+||..+|+...+ .+++|+.+. .+ .+.|+.||+.+
T Consensus 130 ~SS~~~~g~~~~----~~~~E~~~~-----------------------------------------~p~~~~Y~~sK~~~ 164 (348)
T 1ek6_A 130 SSSATVYGNPQY----LPLDEAHPT-----------------------------------------GGCTNPYGKSKFFI 164 (348)
T ss_dssp EEEGGGGCSCSS----SSBCTTSCC-----------------------------------------CCCSSHHHHHHHHH
T ss_pred ECcHHHhCCCCC----CCcCCCCCC-----------------------------------------CCCCCchHHHHHHH
Confidence 999999986431 222222221 23 57899999999
Q ss_pred HHHHHHh--h-cCCcEEEEecCccccCCCCCCCccccc--ccccHHHHHHhh--cCCceeecc------CCCceeeeeeH
Q 010075 239 EMLMQQS--K-ENLSLVIIRPTVVSGTYKEPFPGWVED--LKTINTLFVASA--QGNLRCLVG------ETKVIMDVIPV 305 (519)
Q Consensus 239 E~lv~~~--~-~~lp~~IvRPs~V~g~~~~p~~gw~~~--~~~~~~~i~~~~--~g~~~~~~~------~~~~~~d~vpV 305 (519)
|.+++.+ . .+++++++||+.|||+......|.... .......+.... .+....+++ +++..+++|||
T Consensus 165 e~~~~~~~~~~~~~~~~~lR~~~v~G~~~~g~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~i~v 244 (348)
T 1ek6_A 165 EEMIRDLCQADKTWNAVLLRYFNPTGAHASGCIGEDPQGIPNNLMPYVSQVAIGRREALNVFGNDYDTEDGTGVRDYIHV 244 (348)
T ss_dssp HHHHHHHHHHCTTCEEEEEEECEEECCCTTSSCCCCCSSSCCSHHHHHHHHHHTSSSCEEEECSCSSSSSSSCEECEEEH
T ss_pred HHHHHHHHhcCCCcceEEEeeccccCCCcccccCcCcccchhhHHHHHHHHHHhcCCCeEEeCCcccCCCCceEEeeEEH
Confidence 9999887 2 349999999999999854222121110 012222233332 444444555 67889999999
Q ss_pred HHHHHHHHHHHHHhccCCCCCcEEEecCCCCCchhHHHHHH
Q 010075 306 DMVVNAMIVAMVAHAKQPSDANIYHVGSSLRNPVTLGLQVA 346 (519)
Q Consensus 306 Ddva~aii~a~~~~~~~~~~~~iyni~s~~~~~i~~~~~~~ 346 (519)
+|+|++++.++....... .+++||++++...++..+...+
T Consensus 245 ~Dva~a~~~~~~~~~~~~-g~~~~ni~~~~~~s~~e~~~~i 284 (348)
T 1ek6_A 245 VDLAKGHIAALRKLKEQC-GCRIYNLGTGTGYSVLQMVQAM 284 (348)
T ss_dssp HHHHHHHHHHHHHHTTTC-CEEEEEECCSCCEEHHHHHHHH
T ss_pred HHHHHHHHHHHhcccccC-CceEEEeCCCCCccHHHHHHHH
Confidence 999999999987542111 1379999998665544444443
|
| >2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=99.96 E-value=1.8e-28 Score=249.41 Aligned_cols=238 Identities=15% Similarity=0.089 Sum_probs=172.8
Q ss_pred cCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 010075 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (519)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (519)
...|+|||||||||||++|+++|++.| .+|+++.|+..... ++. ..++++
T Consensus 11 ~~~M~ilVtGatG~iG~~l~~~L~~~g---~~V~~~~r~~~~~~---~l~------------------------~~~~~~ 60 (342)
T 2x4g_A 11 GAHVKYAVLGATGLLGHHAARAIRAAG---HDLVLIHRPSSQIQ---RLA------------------------YLEPEC 60 (342)
T ss_dssp -CCCEEEEESTTSHHHHHHHHHHHHTT---CEEEEEECTTSCGG---GGG------------------------GGCCEE
T ss_pred ccCCEEEEECCCcHHHHHHHHHHHHCC---CEEEEEecChHhhh---hhc------------------------cCCeEE
Confidence 345799999999999999999999988 68899999764321 000 136889
Q ss_pred EeccCCCCCCCCChhhhHHHHhcCccEEEEcCccCCc-cccHHHHHHHhHHHHHHHHHHHHhccCCceEEEEecceeecC
Q 010075 90 VPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF-DERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAYVAGE 168 (519)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~~~vdiViH~Aa~v~f-~~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V~vSTa~v~~~ 168 (519)
+.+|+++ .+....+++++|+|||+||.... .++.+..+++|+.|+.+++++|++. ++++|||+||.++++.
T Consensus 61 ~~~Dl~d-------~~~~~~~~~~~d~vih~a~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~-~~~~~v~~SS~~~~~~ 132 (342)
T 2x4g_A 61 RVAEMLD-------HAGLERALRGLDGVIFSAGYYPSRPRRWQEEVASALGQTNPFYAACLQA-RVPRILYVGSAYAMPR 132 (342)
T ss_dssp EECCTTC-------HHHHHHHTTTCSEEEEC------------CHHHHHHHHHHHHHHHHHHH-TCSCEEEECCGGGSCC
T ss_pred EEecCCC-------HHHHHHHHcCCCEEEECCccCcCCCCCHHHHHHHHHHHHHHHHHHHHHc-CCCeEEEECCHHhhCc
Confidence 9999994 44445778899999999997653 3566778999999999999999986 7899999999999986
Q ss_pred cCC--eeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCC----CcHHHHHHHHHHHHH
Q 010075 169 RTG--LILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGW----PNTYVFTKTMGEMLM 242 (519)
Q Consensus 169 ~~~--~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~----~n~Y~~sK~~aE~lv 242 (519)
..+ ..+|. .+. .+ .+.|+.||+.+|+++
T Consensus 133 ~~~~~~~~E~-----~~~-----------------------------------------~p~~~~~~~Y~~sK~~~e~~~ 166 (342)
T 2x4g_A 133 HPQGLPGHEG-----LFY-----------------------------------------DSLPSGKSSYVLCKWALDEQA 166 (342)
T ss_dssp CTTSSCBCTT-----CCC-----------------------------------------SSCCTTSCHHHHHHHHHHHHH
T ss_pred CCCCCCCCCC-----CCC-----------------------------------------CccccccChHHHHHHHHHHHH
Confidence 542 11222 221 23 678999999999999
Q ss_pred HHh-hcCCcEEEEecCccccCCC-CCCCcccccccccHHHHHHhhcCCceeeccCCCceeeeeeHHHHHHHHHHHHHHhc
Q 010075 243 QQS-KENLSLVIIRPTVVSGTYK-EPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMIVAMVAHA 320 (519)
Q Consensus 243 ~~~-~~~lp~~IvRPs~V~g~~~-~p~~gw~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~d~vpVDdva~aii~a~~~~~ 320 (519)
+.+ ..+++++++||+.|||+.. .+ + ...++..+..|....+ ++..+++++++|+|++++.++....
T Consensus 167 ~~~~~~g~~~~ilrp~~v~g~~~~~~--~-------~~~~~~~~~~~~~~~~---~~~~~~~i~v~Dva~~~~~~~~~~~ 234 (342)
T 2x4g_A 167 REQARNGLPVVIGIPGMVLGELDIGP--T-------TGRVITAIGNGEMTHY---VAGQRNVIDAAEAGRGLLMALERGR 234 (342)
T ss_dssp HHHHHTTCCEEEEEECEEECSCCSSC--S-------TTHHHHHHHTTCCCEE---ECCEEEEEEHHHHHHHHHHHHHHSC
T ss_pred HHHhhcCCcEEEEeCCceECCCCccc--c-------HHHHHHHHHcCCCccc---cCCCcceeeHHHHHHHHHHHHhCCC
Confidence 986 2389999999999999865 21 1 2334555556655444 5678999999999999999987532
Q ss_pred cCCCCCcEEEecCCCCCchhHHHHHHHH
Q 010075 321 KQPSDANIYHVGSSLRNPVTLGLQVANT 348 (519)
Q Consensus 321 ~~~~~~~iyni~s~~~~~i~~~~~~~~~ 348 (519)
. +++||++++. .++..+...+..
T Consensus 235 ~----g~~~~v~~~~-~s~~e~~~~i~~ 257 (342)
T 2x4g_A 235 I----GERYLLTGHN-LEMADLTRRIAE 257 (342)
T ss_dssp T----TCEEEECCEE-EEHHHHHHHHHH
T ss_pred C----CceEEEcCCc-ccHHHHHHHHHH
Confidence 1 5799999986 555545555443
|
| >2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=2.9e-28 Score=252.45 Aligned_cols=246 Identities=15% Similarity=0.035 Sum_probs=185.6
Q ss_pred CCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEE
Q 010075 11 ENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFV 90 (519)
Q Consensus 11 ~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v 90 (519)
.+|+|||||||||||++|+++|++.| .+|+++.|+...... ....+++++
T Consensus 28 ~~~~vlVtGatG~iG~~l~~~L~~~g---~~V~~~~r~~~~~~~---------------------------~~~~~v~~~ 77 (379)
T 2c5a_A 28 ENLKISITGAGGFIASHIARRLKHEG---HYVIASDWKKNEHMT---------------------------EDMFCDEFH 77 (379)
T ss_dssp SCCEEEEETTTSHHHHHHHHHHHHTT---CEEEEEESSCCSSSC---------------------------GGGTCSEEE
T ss_pred cCCeEEEECCccHHHHHHHHHHHHCC---CeEEEEECCCccchh---------------------------hccCCceEE
Confidence 46899999999999999999999988 688999998643211 002468899
Q ss_pred eccCCCCCCCCChhhhHHHHhcCccEEEEcCccCCc----cccHHHHHHHhHHHHHHHHHHHHhccCCceEEEEecceee
Q 010075 91 PGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF----DERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAYVA 166 (519)
Q Consensus 91 ~gDl~~~~lgls~~~~~~~l~~~vdiViH~Aa~v~f----~~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V~vSTa~v~ 166 (519)
.+|+++ .+....+++++|+|||+||.... .++.+..+++|+.|+.+++++|++. ++++|||+||..+|
T Consensus 78 ~~Dl~d-------~~~~~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~-~~~~~V~~SS~~v~ 149 (379)
T 2c5a_A 78 LVDLRV-------MENCLKVTEGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMIEAARIN-GIKRFFYASSACIY 149 (379)
T ss_dssp ECCTTS-------HHHHHHHHTTCSEEEECCCCCCCHHHHTTCHHHHHHHHHHHHHHHHHHHHHT-TCSEEEEEEEGGGS
T ss_pred ECCCCC-------HHHHHHHhCCCCEEEECceecCcccccccCHHHHHHHHHHHHHHHHHHHHHc-CCCEEEEEeehhee
Confidence 999994 44445777899999999998654 4578888999999999999999986 78999999999998
Q ss_pred cCcCC------eeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcHHHHHHHHHHH
Q 010075 167 GERTG------LILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEM 240 (519)
Q Consensus 167 ~~~~~------~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~Y~~sK~~aE~ 240 (519)
+...+ .++|... ....+.+.|+.||+.+|+
T Consensus 150 ~~~~~~~~~~~~~~E~~~--------------------------------------------~~~~~~~~Y~~sK~~~E~ 185 (379)
T 2c5a_A 150 PEFKQLETTNVSLKESDA--------------------------------------------WPAEPQDAFGLEKLATEE 185 (379)
T ss_dssp CGGGSSSSSSCEECGGGG--------------------------------------------SSBCCSSHHHHHHHHHHH
T ss_pred CCCCCCCccCCCcCcccC--------------------------------------------CCCCCCChhHHHHHHHHH
Confidence 85431 1222210 011456789999999999
Q ss_pred HHHHh--hcCCcEEEEecCccccCCCCCCCcccccccccHHHHHHhhcCCc-eeeccCCCceeeeeeHHHHHHHHHHHHH
Q 010075 241 LMQQS--KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNL-RCLVGETKVIMDVIPVDMVVNAMIVAMV 317 (519)
Q Consensus 241 lv~~~--~~~lp~~IvRPs~V~g~~~~p~~gw~~~~~~~~~~i~~~~~g~~-~~~~~~~~~~~d~vpVDdva~aii~a~~ 317 (519)
+++.+ ..+++++++||+.|||+...+..++. ..+..++..+..|.. ..++++++..++++||+|+|++++.++.
T Consensus 186 ~~~~~~~~~gi~~~ilrp~~v~G~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~g~g~~~~~~i~v~Dva~ai~~~l~ 262 (379)
T 2c5a_A 186 LCKHYNKDFGIECRIGRFHNIYGPFGTWKGGRE---KAPAAFCRKAQTSTDRFEMWGDGLQTRSFTFIDECVEGVLRLTK 262 (379)
T ss_dssp HHHHHHHHHCCEEEEEEECCEECTTSCCSSSCC---CHHHHHHHHHHHCSSCEEEESCSCCEECCEEHHHHHHHHHHHHH
T ss_pred HHHHHHHHHCCCEEEEEeCceeCcCCCcccccc---cHHHHHHHHHHhCCCceEEeCCCCeeEEEEEHHHHHHHHHHHhh
Confidence 99876 35899999999999998764432221 123445555555654 5567888899999999999999999986
Q ss_pred HhccCCCCCcEEEecCCCCCchhHHHHHH
Q 010075 318 AHAKQPSDANIYHVGSSLRNPVTLGLQVA 346 (519)
Q Consensus 318 ~~~~~~~~~~iyni~s~~~~~i~~~~~~~ 346 (519)
.. .+++||++++...++..+...+
T Consensus 263 ~~-----~~~~~ni~~~~~~s~~e~~~~i 286 (379)
T 2c5a_A 263 SD-----FREPVNIGSDEMVSMNEMAEMV 286 (379)
T ss_dssp SS-----CCSCEEECCCCCEEHHHHHHHH
T ss_pred cc-----CCCeEEeCCCCccCHHHHHHHH
Confidence 42 2568999998665544344443
|
| >2bll_A Protein YFBG; decarboxylase, short chain dehydrogenase, L-ARA4N biosynthes methyltransferase, transferase; 2.3A {Escherichia coli} SCOP: c.2.1.2 PDB: 1u9j_A 1z73_A 1z75_A 1z7b_A 1z74_A | Back alignment and structure |
|---|
Probab=99.96 E-value=2.5e-28 Score=248.57 Aligned_cols=259 Identities=19% Similarity=0.213 Sum_probs=185.9
Q ss_pred CEEEEeCCccHHHHHHHHHHHHh-CCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEEe
Q 010075 13 KTILVSGVTGFVAKVFIEKILRV-QPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVP 91 (519)
Q Consensus 13 k~VlITGaTGFlG~~Lv~~LL~~-g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v~ 91 (519)
|+|||||||||||++++++|++. | .+|+++.|+...... + ....+++++.
T Consensus 1 m~vlVtGatG~iG~~l~~~L~~~~g---~~V~~~~r~~~~~~~---~-----------------------~~~~~~~~~~ 51 (345)
T 2bll_A 1 MRVLILGVNGFIGNHLTERLLREDH---YEVYGLDIGSDAISR---F-----------------------LNHPHFHFVE 51 (345)
T ss_dssp CEEEEETCSSHHHHHHHHHHHHSTT---CEEEEEESCCGGGGG---G-----------------------TTCTTEEEEE
T ss_pred CeEEEECCCcHHHHHHHHHHHHhCC---CEEEEEeCCcchHHH---h-----------------------hcCCCeEEEe
Confidence 58999999999999999999997 6 688999997543210 0 0025789999
Q ss_pred ccCCCCCCCCChhhhHHHHhcCccEEEEcCccCCc---cccHHHHHHHhHHHHHHHHHHHHhccCCceEEEEecceeecC
Q 010075 92 GDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF---DERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAYVAGE 168 (519)
Q Consensus 92 gDl~~~~lgls~~~~~~~l~~~vdiViH~Aa~v~f---~~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V~vSTa~v~~~ 168 (519)
+|++++ .+..+.+++++|+|||+||.... .++....+++|+.|+.+++++|++. + ++|||+||+.+|+.
T Consensus 52 ~D~~~~------~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~-~~~v~~SS~~v~g~ 123 (345)
T 2bll_A 52 GDISIH------SEWIEYHVKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKY-R-KRIIFPSTSEVYGM 123 (345)
T ss_dssp CCTTTC------SHHHHHHHHHCSEEEECBCCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHT-T-CEEEEECCGGGGBT
T ss_pred ccccCc------HHHHHhhccCCCEEEEcccccCccchhcCHHHHHHHHHHHHHHHHHHHHHh-C-CeEEEEecHHHcCC
Confidence 999952 23344566789999999997653 3467778999999999999999986 5 89999999999986
Q ss_pred cCC-eeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcHHHHHHHHHHHHHHHh--
Q 010075 169 RTG-LILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLMQQS-- 245 (519)
Q Consensus 169 ~~~-~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~Y~~sK~~aE~lv~~~-- 245 (519)
..+ .++|..... +.. ....+.+.|+.||+.+|++++.+
T Consensus 124 ~~~~~~~e~~~~~--~~~-------------------------------------~~~~~~~~Y~~sK~~~e~~~~~~~~ 164 (345)
T 2bll_A 124 CSDKYFDEDHSNL--IVG-------------------------------------PVNKPRWIYSVSKQLLDRVIWAYGE 164 (345)
T ss_dssp CCCSSBCTTTCCC--BCC-------------------------------------CTTCGGGHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCcCCccccc--ccC-------------------------------------cccCcccccHHHHHHHHHHHHHHHH
Confidence 432 233331100 000 00134568999999999999876
Q ss_pred hcCCcEEEEecCccccCCCCCCCccccc-ccccHHHHHHhhcCCceeeccCCCceeeeeeHHHHHHHHHHHHHHhccCCC
Q 010075 246 KENLSLVIIRPTVVSGTYKEPFPGWVED-LKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMIVAMVAHAKQPS 324 (519)
Q Consensus 246 ~~~lp~~IvRPs~V~g~~~~p~~gw~~~-~~~~~~~i~~~~~g~~~~~~~~~~~~~d~vpVDdva~aii~a~~~~~~~~~ 324 (519)
..+++++++||+.|||+...+...+..+ ......++..+..|....++++++..++++||+|+|++++.++...... .
T Consensus 165 ~~~~~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~a~~~~~~~~~~~-~ 243 (345)
T 2bll_A 165 KEGLQFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLIDGGKQKRCFTDIRDGIEALYRIIENAGNR-C 243 (345)
T ss_dssp HHCCCEEEEEECSEECSSCCCTTCSBSCBCHHHHHHHHHHHHTCCEEEGGGSCCEEECEEHHHHHHHHHHHHHCGGGT-T
T ss_pred hcCCCEEEEcCCcccCCCcccccccccccccHHHHHHHHHHcCCCcEEECCCCEEEEEEEHHHHHHHHHHHHhhcccc-C
Confidence 3589999999999999986432211111 1233456666677777777888889999999999999999998754211 1
Q ss_pred CCcEEEecCCC-CCchhHHHHHHHH
Q 010075 325 DANIYHVGSSL-RNPVTLGLQVANT 348 (519)
Q Consensus 325 ~~~iyni~s~~-~~~i~~~~~~~~~ 348 (519)
.+++||++++. ..++..+...+..
T Consensus 244 ~g~~~~i~~~~~~~s~~e~~~~i~~ 268 (345)
T 2bll_A 244 DGEIINIGNPENEASIEELGEMLLA 268 (345)
T ss_dssp TTEEEEECCTTSEEEHHHHHHHHHH
T ss_pred CCceEEeCCCCCCCCHHHHHHHHHH
Confidence 26899999874 4454445544433
|
| >1oc2_A DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnose; HET: TDX NAD; 1.5A {Streptococcus suis} SCOP: c.2.1.2 PDB: 1ker_A* 1ket_A* 1kep_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=3.8e-28 Score=247.85 Aligned_cols=250 Identities=20% Similarity=0.244 Sum_probs=182.5
Q ss_pred CEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEEec
Q 010075 13 KTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVPG 92 (519)
Q Consensus 13 k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v~g 92 (519)
|+|||||||||||++|+++|++.+++ .+|+++.|....... +++ ......+++++.+
T Consensus 5 ~~vlVTGatG~iG~~l~~~L~~~~~g-~~V~~~~r~~~~~~~-~~~---------------------~~~~~~~~~~~~~ 61 (348)
T 1oc2_A 5 KNIIVTGGAGFIGSNFVHYVYNNHPD-VHVTVLDKLTYAGNK-ANL---------------------EAILGDRVELVVG 61 (348)
T ss_dssp SEEEEETTTSHHHHHHHHHHHHHCTT-CEEEEEECCCTTCCG-GGT---------------------GGGCSSSEEEEEC
T ss_pred cEEEEeCCccHHHHHHHHHHHHhCCC-CEEEEEeCCCCCCCh-hHH---------------------hhhccCCeEEEEC
Confidence 68999999999999999999998433 588999997532110 000 0111257899999
Q ss_pred cCCCCCCCCChhhhHHHHhcCccEEEEcCccCCcc---ccHHHHHHHhHHHHHHHHHHHHhccCCceEEEEecceeecCc
Q 010075 93 DISSEDLGLKDSNLKEELWNELDIMVNSAAITKFD---ERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAYVAGER 169 (519)
Q Consensus 93 Dl~~~~lgls~~~~~~~l~~~vdiViH~Aa~v~f~---~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V~vSTa~v~~~~ 169 (519)
|+++ .+....+++++|+|||+||..... ++.+..+++|+.|+.+++++|.+. +. +|||+||..+|+..
T Consensus 62 Dl~d-------~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~-~~-~~v~~SS~~vyg~~ 132 (348)
T 1oc2_A 62 DIAD-------AELVDKLAAKADAIVHYAAESHNDNSLNDPSPFIHTNFIGTYTLLEAARKY-DI-RFHHVSTDEVYGDL 132 (348)
T ss_dssp CTTC-------HHHHHHHHTTCSEEEECCSCCCHHHHHHCCHHHHHHHTHHHHHHHHHHHHH-TC-EEEEEEEGGGGCCB
T ss_pred CCCC-------HHHHHHHhhcCCEEEECCcccCccchhhCHHHHHHHHHHHHHHHHHHHHHh-CC-eEEEecccceeCCC
Confidence 9994 444457888999999999987542 455778999999999999999987 56 99999999999854
Q ss_pred CC--------eeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcHHHHHHHHHHHH
Q 010075 170 TG--------LILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEML 241 (519)
Q Consensus 170 ~~--------~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~Y~~sK~~aE~l 241 (519)
.. ..++.+++|+.+ ..+.+.|+.||+.+|.+
T Consensus 133 ~~~~~~~~~~~~~~~~~~E~~~-----------------------------------------~~~~~~Y~~sK~~~e~~ 171 (348)
T 1oc2_A 133 PLREDLPGHGEGPGEKFTAETN-----------------------------------------YNPSSPYSSTKAASDLI 171 (348)
T ss_dssp CCGGGSTTTTCSTTSSBCTTSC-----------------------------------------CCCCSHHHHHHHHHHHH
T ss_pred cccccccccccccCCCcCCCCC-----------------------------------------CCCCCccHHHHHHHHHH
Confidence 21 000122222221 14567999999999999
Q ss_pred HHHh--hcCCcEEEEecCccccCCCCCCCcccccccccHHHHHHhhcCCceeeccCCCceeeeeeHHHHHHHHHHHHHHh
Q 010075 242 MQQS--KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMIVAMVAH 319 (519)
Q Consensus 242 v~~~--~~~lp~~IvRPs~V~g~~~~p~~gw~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~d~vpVDdva~aii~a~~~~ 319 (519)
++.+ ..+++++++||+.|||+...+. .....++..+..|....++++++...++++++|+|++++.++...
T Consensus 172 ~~~~~~~~gi~~~ilrp~~v~G~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~~ 244 (348)
T 1oc2_A 172 VKAWVRSFGVKATISNCSNNYGPYQHIE-------KFIPRQITNILAGIKPKLYGEGKNVRDWIHTNDHSTGVWAILTKG 244 (348)
T ss_dssp HHHHHHHHCCEEEEEEECCEESTTCCTT-------SHHHHHHHHHHHTCCCEEETTSCCEEECEEHHHHHHHHHHHHHHC
T ss_pred HHHHHHHhCCCEEEEeeceeeCCCCCcc-------chHHHHHHHHHcCCCceEecCCCceEeeEEHHHHHHHHHHHhhCC
Confidence 9886 3489999999999999876321 122345555666766667788889999999999999999998643
Q ss_pred ccCCCCCcEEEecCCCCCchhHHHHHH
Q 010075 320 AKQPSDANIYHVGSSLRNPVTLGLQVA 346 (519)
Q Consensus 320 ~~~~~~~~iyni~s~~~~~i~~~~~~~ 346 (519)
. .+++||++++...++..+...+
T Consensus 245 ~----~g~~~~i~~~~~~s~~e~~~~i 267 (348)
T 1oc2_A 245 R----MGETYLIGADGEKNNKEVLELI 267 (348)
T ss_dssp C----TTCEEEECCSCEEEHHHHHHHH
T ss_pred C----CCCeEEeCCCCCCCHHHHHHHH
Confidence 1 2679999998655543344433
|
| >1gy8_A UDP-galactose 4-epimerase; oxidoreductase; HET: NAD UDP; 2.0A {Trypanosoma brucei} SCOP: c.2.1.2 PDB: 2cnb_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=9.2e-28 Score=249.59 Aligned_cols=270 Identities=16% Similarity=0.208 Sum_probs=180.8
Q ss_pred CCEEEEeCCccHHHHHHHHHHH-HhCCCccEEEEEEecCCccc------HHHHHHHHHhhhhhHHHHHhhhccccccccC
Q 010075 12 NKTILVSGVTGFVAKVFIEKIL-RVQPNVKKLYLFVRAADIDS------AALRFQNEVLAKDVFNVLKEKWGTRLNSFIS 84 (519)
Q Consensus 12 ~k~VlITGaTGFlG~~Lv~~LL-~~g~~v~~V~~LvR~~~~~~------~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~ 84 (519)
+|+|||||||||||++|+++|+ +.| .+|+++.|...... ..+.+.+. +.+..+. ...
T Consensus 2 ~m~vlVTGatG~iG~~l~~~L~~~~g---~~V~~~~r~~~~~~~~~~~~~~~~~~~~---------~~~~~~~----~~~ 65 (397)
T 1gy8_A 2 HMRVLVCGGAGYIGSHFVRALLRDTN---HSVVIVDSLVGTHGKSDHVETRENVARK---------LQQSDGP----KPP 65 (397)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHHCC---CEEEEEECCTTTTTCCTTSCCHHHHHHH---------HHHSCSS----CCT
T ss_pred CCEEEEECCCCHHHHHHHHHHHHhCC---CEEEEEecCCcccccccccchHHHHHHH---------HHHhhcc----ccc
Confidence 5799999999999999999999 887 68899998754320 01222110 0010000 001
Q ss_pred Cc---eEEEeccCCCCCCCCChhhhHHHHhc--C-ccEEEEcCccCCcc---ccHHHHHHHhHHHHHHHHHHHHhccCCc
Q 010075 85 EK---ITFVPGDISSEDLGLKDSNLKEELWN--E-LDIMVNSAAITKFD---ERYDVAFGINTLGVIHLVNFAKKCVKLK 155 (519)
Q Consensus 85 ~~---v~~v~gDl~~~~lgls~~~~~~~l~~--~-vdiViH~Aa~v~f~---~~~~~~~~~Nv~gt~~ll~~a~~~~~l~ 155 (519)
.+ +.++.+|+++ .+....+++ + +|+|||+||..... ++++..+++|+.|+.+++++|++. +++
T Consensus 66 ~~~~~~~~~~~Dl~d-------~~~~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~-~~~ 137 (397)
T 1gy8_A 66 WADRYAALEVGDVRN-------EDFLNGVFTRHGPIDAVVHMCAFLAVGESVRDPLKYYDNNVVGILRLLQAMLLH-KCD 137 (397)
T ss_dssp TTTCCCEEEESCTTC-------HHHHHHHHHHSCCCCEEEECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHT-TCC
T ss_pred cCCceEEEEECCCCC-------HHHHHHHHHhcCCCCEEEECCCccCcCcchhhHHHHHHHHhHHHHHHHHHHHHh-CCC
Confidence 24 8999999995 333345555 5 99999999987642 567788999999999999999986 789
Q ss_pred eEEEEecceeecCcCC-ee--ecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcHHH
Q 010075 156 VFVHVSTAYVAGERTG-LI--LENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYV 232 (519)
Q Consensus 156 ~~V~vSTa~v~~~~~~-~i--~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~Y~ 232 (519)
+|||+||+++++.... .. +..+++|+.+ ..+.+.|+
T Consensus 138 ~iv~~SS~~v~g~~~~~~~~~~~~~~~E~~~-----------------------------------------~~p~~~Y~ 176 (397)
T 1gy8_A 138 KIIFSSSAAIFGNPTMGSVSTNAEPIDINAK-----------------------------------------KSPESPYG 176 (397)
T ss_dssp EEEEEEEGGGTBSCCC-----CCCCBCTTSC-----------------------------------------CBCSSHHH
T ss_pred EEEEECCHHHhCCCCcccccccccCcCccCC-----------------------------------------CCCCCchH
Confidence 9999999999875431 00 0112222121 13467999
Q ss_pred HHHHHHHHHHHHh--hcCCcEEEEecCccccCCCCCCCccccc-ccccHHHHH-----HhhcCC------------ceee
Q 010075 233 FTKTMGEMLMQQS--KENLSLVIIRPTVVSGTYKEPFPGWVED-LKTINTLFV-----ASAQGN------------LRCL 292 (519)
Q Consensus 233 ~sK~~aE~lv~~~--~~~lp~~IvRPs~V~g~~~~p~~gw~~~-~~~~~~~i~-----~~~~g~------------~~~~ 292 (519)
.||+.+|++++.+ ..+++++++||+.|||+......|.... .......+. .+..|. ...+
T Consensus 177 ~sK~~~e~~~~~~~~~~gi~~~ilRp~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (397)
T 1gy8_A 177 ESKLIAERMIRDCAEAYGIKGICLRYFNACGAHEDGDIGEHYQGSTHLIPIILGRVMSDIAPDQRLTIHEDASTDKRMPI 256 (397)
T ss_dssp HHHHHHHHHHHHHHHHHCCEEEEEEECEEECCCTTSSCSCCSTTCCSHHHHHHHHHHHHHSCC-----------CCCEEE
T ss_pred HHHHHHHHHHHHHHHHHCCcEEEEeccceeCCCccccccccccchhHHHHHHHHHHHHHHHhcCccccccccccCCCcee
Confidence 9999999999886 3489999999999999975433332211 122222232 444443 2344
Q ss_pred cc------CCCceeeeeeHHHHHHHHHHHHHHhccCC--CCC---cEEEecCCCCCchhHHHHHH
Q 010075 293 VG------ETKVIMDVIPVDMVVNAMIVAMVAHAKQP--SDA---NIYHVGSSLRNPVTLGLQVA 346 (519)
Q Consensus 293 ~~------~~~~~~d~vpVDdva~aii~a~~~~~~~~--~~~---~iyni~s~~~~~i~~~~~~~ 346 (519)
++ +++..+++|||||+|++++.++....... ... ++||++++...++..+...+
T Consensus 257 ~g~~~~~~~g~~~~~~v~v~Dva~a~~~~l~~~~~~~~~~~~~~~~~~ni~~~~~~s~~e~~~~i 321 (397)
T 1gy8_A 257 FGTDYPTPDGTCVRDYVHVCDLASAHILALDYVEKLGPNDKSKYFSVFNLGTSRGYSVREVIEVA 321 (397)
T ss_dssp ECSCSSSTTSSCEECEEEHHHHHHHHHHHHHHHHTCCTTTGGGSEEEEEESCSCCEEHHHHHHHH
T ss_pred ecCcccCCCCCeeEeeEeHHHHHHHHHHHHhcccccccccccCCCcEEEeCCCCcccHHHHHHHH
Confidence 55 67889999999999999999987543211 013 79999988665544344433
|
| >2q1s_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NADH complex, sugar binding protein; HET: NAI; 1.50A {Bordetella bronchiseptica} PDB: 2pzj_A* 2q1t_A* 2q1u_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=2.3e-28 Score=252.95 Aligned_cols=258 Identities=20% Similarity=0.189 Sum_probs=183.1
Q ss_pred hcCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceE
Q 010075 9 FLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKIT 88 (519)
Q Consensus 9 ~~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~ 88 (519)
.+++|+|||||||||||++|+++|++.|. .+|+++.|....... ++ . ...+++
T Consensus 29 ~~~~~~ilVtGatG~iG~~l~~~L~~~g~--~~V~~~~r~~~~~~~--~l---------------------~--~~~~v~ 81 (377)
T 2q1s_A 29 KLANTNVMVVGGAGFVGSNLVKRLLELGV--NQVHVVDNLLSAEKI--NV---------------------P--DHPAVR 81 (377)
T ss_dssp GGTTCEEEEETTTSHHHHHHHHHHHHTTC--SEEEEECCCTTCCGG--GS---------------------C--CCTTEE
T ss_pred HhCCCEEEEECCccHHHHHHHHHHHHcCC--ceEEEEECCCCCchh--hc---------------------c--CCCceE
Confidence 46789999999999999999999999872 478999997543210 00 0 025789
Q ss_pred EEeccCCCCCCCCChhhhHHHHhcCccEEEEcCccCCcc---ccHHHHHHHhHHHHHHHHHHHHhccCCceEEEEeccee
Q 010075 89 FVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKFD---ERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAYV 165 (519)
Q Consensus 89 ~v~gDl~~~~lgls~~~~~~~l~~~vdiViH~Aa~v~f~---~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V~vSTa~v 165 (519)
++.+|+++ .+....+++++|+|||+||..... ++....+++|+.|+.+++++|++.+++++|||+||.++
T Consensus 82 ~~~~Dl~d-------~~~l~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~~V~~SS~~v 154 (377)
T 2q1s_A 82 FSETSITD-------DALLASLQDEYDYVFHLATYHGNQSSIHDPLADHENNTLTTLKLYERLKHFKRLKKVVYSAAGCS 154 (377)
T ss_dssp EECSCTTC-------HHHHHHCCSCCSEEEECCCCSCHHHHHHCHHHHHHHHTHHHHHHHHHHTTCSSCCEEEEEEEC--
T ss_pred EEECCCCC-------HHHHHHHhhCCCEEEECCCccCchhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEeCCHHH
Confidence 99999994 444457778999999999987643 46778899999999999999988536889999999999
Q ss_pred ecCcCC-eee--cccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcHHHHHHHHHHHHH
Q 010075 166 AGERTG-LIL--ENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLM 242 (519)
Q Consensus 166 ~~~~~~-~i~--E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~Y~~sK~~aE~lv 242 (519)
|+...+ .++ |.... .+. ..+.+.|+.+|+.+|+++
T Consensus 155 yg~~~~~~~~~~E~~~~--~~~----------------------------------------~~~~~~Y~~sK~~~E~~~ 192 (377)
T 2q1s_A 155 IAEKTFDDAKATEETDI--VSL----------------------------------------HNNDSPYSMSKIFGEFYS 192 (377)
T ss_dssp ------------CCCCC--CCS----------------------------------------SCCCSHHHHHHHHHHHHH
T ss_pred cCCCCCCCcCccccccc--ccc----------------------------------------cCCCCchHHHHHHHHHHH
Confidence 986432 222 22100 010 034578999999999999
Q ss_pred HHh--hcCCcEEEEecCccccCCCCCCCc-cccc-----ccccHHHHHHhhcCCceeeccCCCceeeeeeHHHHHHH-HH
Q 010075 243 QQS--KENLSLVIIRPTVVSGTYKEPFPG-WVED-----LKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNA-MI 313 (519)
Q Consensus 243 ~~~--~~~lp~~IvRPs~V~g~~~~p~~g-w~~~-----~~~~~~~i~~~~~g~~~~~~~~~~~~~d~vpVDdva~a-ii 313 (519)
+.+ ..+++++++||+.|||+...+.+| |... ......++..+..|....++++++..+++|||+|+|++ ++
T Consensus 193 ~~~~~~~gi~~~ilRp~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~g~~~~~~i~v~Dva~a~i~ 272 (377)
T 2q1s_A 193 VYYHKQHQLPTVRARFQNVYGPGEILGAGRWRGTPATVWRNVTPTFIYKALKGMPLPLENGGVATRDFIFVEDVANGLIA 272 (377)
T ss_dssp HHHHHHHCCCEEEEEECCEECTTCCTTCSSCCSSGGGTSCSHHHHHHHHHHTTCCCCCSGGGCCEECCEEHHHHHHHHHH
T ss_pred HHHHHHhCCCEEEEeeccEECCCCcccccccccCcccccccHHHHHHHHHHcCCCeEEeCCCCeEEeeEEHHHHHHHHHH
Confidence 886 348999999999999987632222 2211 12344566667777766677888899999999999999 88
Q ss_pred HHHHHhccCCCCCcEEEecCCCCCchhHHHHHHH
Q 010075 314 VAMVAHAKQPSDANIYHVGSSLRNPVTLGLQVAN 347 (519)
Q Consensus 314 ~a~~~~~~~~~~~~iyni~s~~~~~i~~~~~~~~ 347 (519)
.++.... .+ +||++++...++..+...+.
T Consensus 273 ~~~~~~~----~g-~~~i~~~~~~s~~e~~~~i~ 301 (377)
T 2q1s_A 273 CAADGTP----GG-VYNIASGKETSIADLATKIN 301 (377)
T ss_dssp HHHHCCT----TE-EEECCCCCCEEHHHHHHHHH
T ss_pred HHHhcCC----CC-eEEecCCCceeHHHHHHHHH
Confidence 8886421 25 99999986655444444443
|
| >1orr_A CDP-tyvelose-2-epimerase; rossmann fold, short-chain dehydrogenase/reductase, isomeras; HET: NAD CDP; 1.50A {Salmonella typhi} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.96 E-value=2e-28 Score=249.50 Aligned_cols=258 Identities=17% Similarity=0.212 Sum_probs=177.0
Q ss_pred CEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEEec
Q 010075 13 KTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVPG 92 (519)
Q Consensus 13 k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v~g 92 (519)
|+|||||||||||++|+++|++.| .+|+++.|....... +.+. . +.. ..+++++.+
T Consensus 2 ~~vlVTGatG~iG~~l~~~L~~~g---~~V~~~~r~~~~~~~-~~~~-~---------l~~----------~~~~~~~~~ 57 (347)
T 1orr_A 2 AKLLITGGCGFLGSNLASFALSQG---IDLIVFDNLSRKGAT-DNLH-W---------LSS----------LGNFEFVHG 57 (347)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTT---CEEEEEECCCSTTHH-HHHH-H---------HHT----------TCCCEEEEC
T ss_pred cEEEEeCCCchhHHHHHHHHHhCC---CEEEEEeCCCccCch-hhhh-h---------hcc----------CCceEEEEc
Confidence 689999999999999999999988 688999985422111 1111 0 110 146889999
Q ss_pred cCCCCCCCCChhhhHHHHhcC--ccEEEEcCccCCcc---ccHHHHHHHhHHHHHHHHHHHHhccCCc-eEEEEecceee
Q 010075 93 DISSEDLGLKDSNLKEELWNE--LDIMVNSAAITKFD---ERYDVAFGINTLGVIHLVNFAKKCVKLK-VFVHVSTAYVA 166 (519)
Q Consensus 93 Dl~~~~lgls~~~~~~~l~~~--vdiViH~Aa~v~f~---~~~~~~~~~Nv~gt~~ll~~a~~~~~l~-~~V~vSTa~v~ 166 (519)
|+++ .+..+.++++ +|+|||+||..... ++++..+++|+.|+.+++++|++. +.+ +|||+||.++|
T Consensus 58 Dl~d-------~~~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~nv~~~~~l~~a~~~~-~~~~~iv~~SS~~v~ 129 (347)
T 1orr_A 58 DIRN-------KNDVTRLITKYMPDSCFHLAGQVAMTTSIDNPCMDFEINVGGTLNLLEAVRQY-NSNCNIIYSSTNKVY 129 (347)
T ss_dssp CTTC-------HHHHHHHHHHHCCSEEEECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHH-CTTCEEEEEEEGGGG
T ss_pred CCCC-------HHHHHHHHhccCCCEEEECCcccChhhhhhCHHHHHHHHHHHHHHHHHHHHHh-CCCceEEEeccHHHh
Confidence 9995 3334466666 99999999986542 467788999999999999999986 564 99999999999
Q ss_pred cCcCC-eeeccc--CC-CCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcHHHHHHHHHHHHH
Q 010075 167 GERTG-LILENP--LD-GASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLM 242 (519)
Q Consensus 167 ~~~~~-~i~E~~--~~-e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~Y~~sK~~aE~lv 242 (519)
+...+ ...|.. +. ...+. ..+|+ ....+.+.|+.||+.+|+++
T Consensus 130 g~~~~~~~~e~~~~~~~~~~~~-------------------~~~e~--------------~~~~~~~~Y~~sK~~~E~~~ 176 (347)
T 1orr_A 130 GDLEQYKYNETETRYTCVDKPN-------------------GYDES--------------TQLDFHSPYGCSKGAADQYM 176 (347)
T ss_dssp TTCTTSCEEECSSCEEETTCTT-------------------CBCTT--------------SCCCCCHHHHHHHHHHHHHH
T ss_pred CCCCcCCccccccccccccccc-------------------Ccccc--------------CCCCCCCchHHHHHHHHHHH
Confidence 86432 122210 00 00000 00000 11145678999999999999
Q ss_pred HHh--hcCCcEEEEecCccccCCCCCCCcccccccccHHHHHHhhcCC-----ceeeccCCCceeeeeeHHHHHHHHHHH
Q 010075 243 QQS--KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGN-----LRCLVGETKVIMDVIPVDMVVNAMIVA 315 (519)
Q Consensus 243 ~~~--~~~lp~~IvRPs~V~g~~~~p~~gw~~~~~~~~~~i~~~~~g~-----~~~~~~~~~~~~d~vpVDdva~aii~a 315 (519)
+.+ ..+++++++||+.|||+...+.. +. .....++.....|. ...++++++..+++++++|+|++++.+
T Consensus 177 ~~~~~~~gi~~~ilrp~~v~g~~~~~~~---~~-~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~i~v~Dva~a~~~~ 252 (347)
T 1orr_A 177 LDYARIFGLNTVVFRHSSMYGGRQFATY---DQ-GWVGWFCQKAVEIKNGINKPFTISGNGKQVRDVLHAEDMISLYFTA 252 (347)
T ss_dssp HHHHHHHCCEEEEEEECCEECTTCCCBT---TB-CHHHHHHHHHHHHHTTCCCCEEEESSSCCEEECEEHHHHHHHHHHH
T ss_pred HHHHHHhCCcEEEEccCceeCcCCCCCC---cC-cHHHHHHHHHHhCcccCCCCeEEecCCcceEeeEEHHHHHHHHHHH
Confidence 886 34899999999999998763311 00 11223444444443 345678899999999999999999998
Q ss_pred HHHhccCCCCCcEEEecCCCCCchhH
Q 010075 316 MVAHAKQPSDANIYHVGSSLRNPVTL 341 (519)
Q Consensus 316 ~~~~~~~~~~~~iyni~s~~~~~i~~ 341 (519)
+...... .+++||++++..+++++
T Consensus 253 ~~~~~~~--~g~~~~v~~~~~~~~s~ 276 (347)
T 1orr_A 253 LANVSKI--RGNAFNIGGTIVNSLSL 276 (347)
T ss_dssp HHTHHHH--TTCEEEESSCGGGEEEH
T ss_pred HhccccC--CCCEEEeCCCCCCCccH
Confidence 8631111 25799999885434444
|
| >2yy7_A L-threonine dehydrogenase; thermolabIle, flavobacterium FRIG KUC-1, oxidoreductase; HET: PE8 NAD MES; 2.06A {Flavobacterium frigidimaris} | Back alignment and structure |
|---|
Probab=99.96 E-value=1.1e-28 Score=247.97 Aligned_cols=233 Identities=17% Similarity=0.123 Sum_probs=171.7
Q ss_pred CCEEEEeCCccHHHHHHHHHHHHh--CCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 010075 12 NKTILVSGVTGFVAKVFIEKILRV--QPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (519)
Q Consensus 12 ~k~VlITGaTGFlG~~Lv~~LL~~--g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (519)
+|+|||||||||||++|+++|++. + .+|+++.|+..... +. .++++
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~~~~g---~~V~~~~r~~~~~~----~~-------------------------~~~~~ 49 (312)
T 2yy7_A 2 NPKILIIGACGQIGTELTQKLRKLYGT---ENVIASDIRKLNTD----VV-------------------------NSGPF 49 (312)
T ss_dssp CCCEEEETTTSHHHHHHHHHHHHHHCG---GGEEEEESCCCSCH----HH-------------------------HSSCE
T ss_pred CceEEEECCccHHHHHHHHHHHHhCCC---CEEEEEcCCCcccc----cc-------------------------CCCce
Confidence 478999999999999999999998 6 57899999765421 11 24678
Q ss_pred EeccCCCCCCCCChhhhHHHHhc--CccEEEEcCccCCc--cccHHHHHHHhHHHHHHHHHHHHhccCCceEEEEeccee
Q 010075 90 VPGDISSEDLGLKDSNLKEELWN--ELDIMVNSAAITKF--DERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAYV 165 (519)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~~--~vdiViH~Aa~v~f--~~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V~vSTa~v 165 (519)
+.+|+++ .+....+++ ++|+|||+||.... ..+....+++|+.|+.+++++|++. ++++|||+||..+
T Consensus 50 ~~~D~~d-------~~~~~~~~~~~~~d~vih~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~~v~~SS~~~ 121 (312)
T 2yy7_A 50 EVVNALD-------FNQIEHLVEVHKITDIYLMAALLSATAEKNPAFAWDLNMNSLFHVLNLAKAK-KIKKIFWPSSIAV 121 (312)
T ss_dssp EECCTTC-------HHHHHHHHHHTTCCEEEECCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHTT-SCSEEECCEEGGG
T ss_pred EEecCCC-------HHHHHHHHhhcCCCEEEECCccCCCchhhChHHHHHHHHHHHHHHHHHHHHc-CCCEEEEeccHHH
Confidence 8999995 333446666 89999999997643 2567788999999999999999985 7899999999999
Q ss_pred ecCcCC--eeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcHHHHHHHHHHHHHH
Q 010075 166 AGERTG--LILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLMQ 243 (519)
Q Consensus 166 ~~~~~~--~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~Y~~sK~~aE~lv~ 243 (519)
|+...+ .++|. .+ ..+.+.|+.||+.+|++++
T Consensus 122 ~~~~~~~~~~~e~-----~~-----------------------------------------~~~~~~Y~~sK~~~e~~~~ 155 (312)
T 2yy7_A 122 FGPTTPKENTPQY-----TI-----------------------------------------MEPSTVYGISKQAGERWCE 155 (312)
T ss_dssp CCTTSCSSSBCSS-----CB-----------------------------------------CCCCSHHHHHHHHHHHHHH
T ss_pred hCCCCCCCCcccc-----Cc-----------------------------------------CCCCchhHHHHHHHHHHHH
Confidence 986431 22222 11 1456789999999999998
Q ss_pred Hh--hcCCcEEEEecCccccCCCCCCCcccccccccHHHHHHhhcCCceeeccCCCceeeeeeHHHHHHHHHHHHHHhcc
Q 010075 244 QS--KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMIVAMVAHAK 321 (519)
Q Consensus 244 ~~--~~~lp~~IvRPs~V~g~~~~p~~gw~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~d~vpVDdva~aii~a~~~~~~ 321 (519)
.+ ..+++++++||+.|||+...|..+.. ......+.....+.....+++++..++++||+|+|++++.++.....
T Consensus 156 ~~~~~~~~~~~~lrp~~v~g~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~~~~~~~ 232 (312)
T 2yy7_A 156 YYHNIYGVDVRSIRYPGLISWSTPPGGGTT---DYAVDIFYKAIADKKYECFLSSETKMPMMYMDDAIDATINIMKAPVE 232 (312)
T ss_dssp HHHHHHCCEEECEEECEEECSSSCCCSCTT---THHHHHHHHHHHTSEEEESSCTTCCEEEEEHHHHHHHHHHHHHSCGG
T ss_pred HHHHhcCCcEEEEeCCeEecCCCCCCCchh---hhHHHHHHHHHcCCCeEEecCCCceeeeeeHHHHHHHHHHHHhCccc
Confidence 76 34899999999999998764432211 11223333333333345567888899999999999999999875332
Q ss_pred CCCCCcEEEecC
Q 010075 322 QPSDANIYHVGS 333 (519)
Q Consensus 322 ~~~~~~iyni~s 333 (519)
....+++||+++
T Consensus 233 ~~~~~~~~ni~~ 244 (312)
T 2yy7_A 233 KIKIHSSYNLAA 244 (312)
T ss_dssp GCCCSSCEECCS
T ss_pred ccccCceEEeCC
Confidence 111137999985
|
| >1rpn_A GDP-mannose 4,6-dehydratase; short-chain dehydrogenase/reductase, rossmann fold, lyase; HET: NDP GDP; 2.15A {Pseudomonas aeruginosa} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.96 E-value=7.8e-28 Score=244.24 Aligned_cols=251 Identities=17% Similarity=0.135 Sum_probs=181.7
Q ss_pred CCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEE
Q 010075 11 ENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFV 90 (519)
Q Consensus 11 ~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v 90 (519)
.+++|||||||||||++|+++|++.| .+|+++.|+...... .++.. + . ...+++++
T Consensus 13 ~~~~vlVTGatG~iG~~l~~~L~~~g---~~V~~~~r~~~~~~~-~~~~~-~---------~----------~~~~~~~~ 68 (335)
T 1rpn_A 13 MTRSALVTGITGQDGAYLAKLLLEKG---YRVHGLVARRSSDTR-WRLRE-L---------G----------IEGDIQYE 68 (335)
T ss_dssp --CEEEEETTTSHHHHHHHHHHHHTT---CEEEEEECCCSSCCC-HHHHH-T---------T----------CGGGEEEE
T ss_pred cCCeEEEECCCChHHHHHHHHHHHCC---CeEEEEeCCCccccc-cchhh-c---------c----------ccCceEEE
Confidence 36899999999999999999999988 688999998654211 11110 0 0 02568899
Q ss_pred eccCCCCCCCCChhhhHHHHhc--CccEEEEcCccCCc---cccHHHHHHHhHHHHHHHHHHHHhccCC-ceEEEEecce
Q 010075 91 PGDISSEDLGLKDSNLKEELWN--ELDIMVNSAAITKF---DERYDVAFGINTLGVIHLVNFAKKCVKL-KVFVHVSTAY 164 (519)
Q Consensus 91 ~gDl~~~~lgls~~~~~~~l~~--~vdiViH~Aa~v~f---~~~~~~~~~~Nv~gt~~ll~~a~~~~~l-~~~V~vSTa~ 164 (519)
.+|+++ .+....+++ ++|+|||+||.... .++....+++|+.|+.+++++|++. ++ ++|||+||.+
T Consensus 69 ~~Dl~d-------~~~~~~~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~-~~~~~~v~~SS~~ 140 (335)
T 1rpn_A 69 DGDMAD-------ACSVQRAVIKAQPQEVYNLAAQSFVGASWNQPVTTGVVDGLGVTHLLEAIRQF-SPETRFYQASTSE 140 (335)
T ss_dssp ECCTTC-------HHHHHHHHHHHCCSEEEECCSCCCHHHHTTSHHHHHHHHTHHHHHHHHHHHHH-CTTSEEEEEEEGG
T ss_pred ECCCCC-------HHHHHHHHHHcCCCEEEECccccchhhhhhChHHHHHHHHHHHHHHHHHHHHh-CCCCeEEEEeCHH
Confidence 999995 333345555 47999999998664 3567888999999999999999986 64 8999999999
Q ss_pred eecCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcHHHHHHHHHHHHHHH
Q 010075 165 VAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLMQQ 244 (519)
Q Consensus 165 v~~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~Y~~sK~~aE~lv~~ 244 (519)
+|+...+ .+++|+.+. .+.+.|+.||+.+|.+++.
T Consensus 141 v~g~~~~----~~~~E~~~~-----------------------------------------~p~~~Y~~sK~~~e~~~~~ 175 (335)
T 1rpn_A 141 MFGLIQA----ERQDENTPF-----------------------------------------YPRSPYGVAKLYGHWITVN 175 (335)
T ss_dssp GGCSCSS----SSBCTTSCC-----------------------------------------CCCSHHHHHHHHHHHHHHH
T ss_pred HhCCCCC----CCCCcccCC-----------------------------------------CCCChhHHHHHHHHHHHHH
Confidence 9986542 122222221 3467899999999999988
Q ss_pred h--hcCCcEEEEecCccccCCCCCCCcccccccccHHHHHHhhcCCce-eeccCCCceeeeeeHHHHHHHHHHHHHHhcc
Q 010075 245 S--KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLR-CLVGETKVIMDVIPVDMVVNAMIVAMVAHAK 321 (519)
Q Consensus 245 ~--~~~lp~~IvRPs~V~g~~~~p~~gw~~~~~~~~~~i~~~~~g~~~-~~~~~~~~~~d~vpVDdva~aii~a~~~~~~ 321 (519)
+ ..+++++++||+.+||+...+ ++.. .....++..+..|... ...++++..+++|||+|+|++++.++....
T Consensus 176 ~~~~~~~~~~i~r~~~v~Gp~~~~--~~~~--~~~~~~~~~~~~g~~~~~~~g~g~~~~~~i~v~Dva~a~~~~~~~~~- 250 (335)
T 1rpn_A 176 YRESFGLHASSGILFNHESPLRGI--EFVT--RKVTDAVARIKLGKQQELRLGNVDAKRDWGFAGDYVEAMWLMLQQDK- 250 (335)
T ss_dssp HHHHHCCCEEEEEECCEECTTSCT--TSHH--HHHHHHHHHHHTTSCSCEEESCTTCEEECEEHHHHHHHHHHHHHSSS-
T ss_pred HHHHcCCcEEEEeeCcccCCCCCC--Ccch--HHHHHHHHHHHcCCCceEEeCCCcceeceEEHHHHHHHHHHHHhcCC-
Confidence 7 348999999999999987532 1111 1233445555666533 356888999999999999999999986421
Q ss_pred CCCCCcEEEecCCCCCchhHHHHHHH
Q 010075 322 QPSDANIYHVGSSLRNPVTLGLQVAN 347 (519)
Q Consensus 322 ~~~~~~iyni~s~~~~~i~~~~~~~~ 347 (519)
.++||++++...++..+...+.
T Consensus 251 ----~~~~ni~~~~~~s~~e~~~~i~ 272 (335)
T 1rpn_A 251 ----ADDYVVATGVTTTVRDMCQIAF 272 (335)
T ss_dssp ----CCCEEECCSCEEEHHHHHHHHH
T ss_pred ----CCEEEEeCCCCccHHHHHHHHH
Confidence 3689999986555444444443
|
| >1kew_A RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fold, lyase; HET: TYD NAD; 1.80A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1g1a_A* 1keu_A* 1bxk_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=8.1e-28 Score=246.63 Aligned_cols=251 Identities=18% Similarity=0.235 Sum_probs=180.5
Q ss_pred CEEEEeCCccHHHHHHHHHHHHh-CCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEEe
Q 010075 13 KTILVSGVTGFVAKVFIEKILRV-QPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVP 91 (519)
Q Consensus 13 k~VlITGaTGFlG~~Lv~~LL~~-g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v~ 91 (519)
|+|||||||||||++|+++|++. + .+|+++.|....... +.+. + +. ...+++++.
T Consensus 1 MkvlVTGasG~iG~~l~~~L~~~~g---~~V~~~~r~~~~~~~-~~~~-------------~-----~~--~~~~~~~~~ 56 (361)
T 1kew_A 1 MKILITGGAGFIGSAVVRHIIKNTQ---DTVVNIDKLTYAGNL-ESLS-------------D-----IS--ESNRYNFEH 56 (361)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHHCS---CEEEEEECCCTTCCG-GGGT-------------T-----TT--TCTTEEEEE
T ss_pred CEEEEECCCchHhHHHHHHHHhcCC---CeEEEEecCCCCCch-hhhh-------------h-----hh--cCCCeEEEE
Confidence 47999999999999999999997 5 588999986522111 0010 0 00 025789999
Q ss_pred ccCCCCCCCCChhhhHHHHhc--CccEEEEcCccCCcc---ccHHHHHHHhHHHHHHHHHHHHhc-cCCc-------eEE
Q 010075 92 GDISSEDLGLKDSNLKEELWN--ELDIMVNSAAITKFD---ERYDVAFGINTLGVIHLVNFAKKC-VKLK-------VFV 158 (519)
Q Consensus 92 gDl~~~~lgls~~~~~~~l~~--~vdiViH~Aa~v~f~---~~~~~~~~~Nv~gt~~ll~~a~~~-~~l~-------~~V 158 (519)
+|+++ .+....+++ ++|+|||+||..... ++++..+++|+.|+.+++++|.+. .+++ +||
T Consensus 57 ~Dl~d-------~~~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~v~~~~~~~~~iv 129 (361)
T 1kew_A 57 ADICD-------SAEITRIFEQYQPDAVMHLAAESHVDRSITGPAAFIETNIVGTYALLEVARKYWSALGEDKKNNFRFH 129 (361)
T ss_dssp CCTTC-------HHHHHHHHHHHCCSEEEECCSCCCHHHHHHCTHHHHHHHTHHHHHHHHHHHHHHHTSCHHHHHHCEEE
T ss_pred CCCCC-------HHHHHHHHhhcCCCEEEECCCCcChhhhhhCHHHHHHHHHHHHHHHHHHHHHhccCcccccccCceEE
Confidence 99995 333446666 899999999987532 456778999999999999999874 2555 999
Q ss_pred EEecceeecCcCC--eeec----ccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcHHH
Q 010075 159 HVSTAYVAGERTG--LILE----NPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYV 232 (519)
Q Consensus 159 ~vSTa~v~~~~~~--~i~E----~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~Y~ 232 (519)
|+||.++||.... ...+ .+++|+.+ ..+.+.|+
T Consensus 130 ~~SS~~v~g~~~~~~~~~~~~~~~~~~E~~~-----------------------------------------~~~~~~Y~ 168 (361)
T 1kew_A 130 HISTDEVYGDLPHPDEVENSVTLPLFTETTA-----------------------------------------YAPSSPYS 168 (361)
T ss_dssp EEEEGGGGCCCCCGGGSCTTSCCCCBCTTSC-----------------------------------------CCCCSHHH
T ss_pred EeCCHHHhCCCcccccccccccCCCCCCCCC-----------------------------------------CCCCCccH
Confidence 9999999886421 0000 01222111 14567999
Q ss_pred HHHHHHHHHHHHh--hcCCcEEEEecCccccCCCCCCCcccccccccHHHHHHhhcCCceeeccCCCceeeeeeHHHHHH
Q 010075 233 FTKTMGEMLMQQS--KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVN 310 (519)
Q Consensus 233 ~sK~~aE~lv~~~--~~~lp~~IvRPs~V~g~~~~p~~gw~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~d~vpVDdva~ 310 (519)
.||+.+|.+++.+ ..+++++++||+.|||+...+. .....++..+..|....+++++....++++++|+|+
T Consensus 169 ~sK~~~e~~~~~~~~~~gi~~~~vrp~~v~G~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~ 241 (361)
T 1kew_A 169 ASKASSDHLVRAWRRTYGLPTIVTNCSNNYGPYHFPE-------KLIPLVILNALEGKPLPIYGKGDQIRDWLYVEDHAR 241 (361)
T ss_dssp HHHHHHHHHHHHHHHHHCCCEEEEEECEEESTTCCTT-------SHHHHHHHHHHHTCCEEEETTSCCEEEEEEHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhCCcEEEEeeceeECCCCCcc-------cHHHHHHHHHHcCCCceEcCCCceeEeeEEHHHHHH
Confidence 9999999999886 3489999999999999876321 123345556666766667788889999999999999
Q ss_pred HHHHHHHHhccCCCCCcEEEecCCCCCchhHHHHHH
Q 010075 311 AMIVAMVAHAKQPSDANIYHVGSSLRNPVTLGLQVA 346 (519)
Q Consensus 311 aii~a~~~~~~~~~~~~iyni~s~~~~~i~~~~~~~ 346 (519)
+++.++.... .+++||++++...++..+...+
T Consensus 242 a~~~~~~~~~----~g~~~~v~~~~~~s~~e~~~~i 273 (361)
T 1kew_A 242 ALHMVVTEGK----AGETYNIGGHNEKKNLDVVFTI 273 (361)
T ss_dssp HHHHHHHHCC----TTCEEEECCCCEEEHHHHHHHH
T ss_pred HHHHHHhCCC----CCCEEEecCCCeeeHHHHHHHH
Confidence 9999986432 2679999998655544444443
|
| >2p5y_A UDP-glucose 4-epimerase; TTHA0591, structural genomics, PSI; HET: NAD; 1.92A {Thermus thermophilus HB8} PDB: 2p5u_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=2.2e-27 Score=238.70 Aligned_cols=241 Identities=20% Similarity=0.236 Sum_probs=176.7
Q ss_pred CEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEEec
Q 010075 13 KTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVPG 92 (519)
Q Consensus 13 k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v~g 92 (519)
|+|||||||||||++++++|++.| .+|+++.|....... ....++.++.+
T Consensus 1 m~vlVTGatG~iG~~l~~~L~~~G---~~V~~~~r~~~~~~~---------------------------~~~~~~~~~~~ 50 (311)
T 2p5y_A 1 MRVLVTGGAGFIGSHIVEDLLARG---LEVAVLDNLATGKRE---------------------------NVPKGVPFFRV 50 (311)
T ss_dssp CEEEEETTTSHHHHHHHHHHHTTT---CEEEEECCCSSCCGG---------------------------GSCTTCCEECC
T ss_pred CEEEEEeCCcHHHHHHHHHHHHCC---CEEEEEECCCcCchh---------------------------hcccCeEEEEC
Confidence 579999999999999999999988 678888885432100 01145778999
Q ss_pred cCCCCCCCCChhhhHHHHhc--CccEEEEcCccCCcc---ccHHHHHHHhHHHHHHHHHHHHhccCCceEEEEecc-eee
Q 010075 93 DISSEDLGLKDSNLKEELWN--ELDIMVNSAAITKFD---ERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTA-YVA 166 (519)
Q Consensus 93 Dl~~~~lgls~~~~~~~l~~--~vdiViH~Aa~v~f~---~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V~vSTa-~v~ 166 (519)
|+++ .+....+++ ++|+|||+||..... ++....+++|+.|+.+++++|++. ++++|||+||. .+|
T Consensus 51 Dl~~-------~~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~N~~g~~~l~~a~~~~-~~~~iv~~SS~~~~~ 122 (311)
T 2p5y_A 51 DLRD-------KEGVERAFREFRPTHVSHQAAQASVKVSVEDPVLDFEVNLLGGLNLLEACRQY-GVEKLVFASTGGAIY 122 (311)
T ss_dssp CTTC-------HHHHHHHHHHHCCSEEEECCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHT-TCSEEEEEEEHHHHH
T ss_pred CCCC-------HHHHHHHHHhcCCCEEEECccccCchhhhhCHHHHHHHHHHHHHHHHHHHHHh-CCCEEEEeCCChhhc
Confidence 9995 333345555 799999999986542 456778999999999999999985 78899999998 888
Q ss_pred cC-cCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcHHHHHHHHHHHHHHHh
Q 010075 167 GE-RTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLMQQS 245 (519)
Q Consensus 167 ~~-~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~Y~~sK~~aE~lv~~~ 245 (519)
+. ..+ .+++|+.+. .+.+.|+.||+.+|++++.+
T Consensus 123 g~~~~~----~~~~E~~~~-----------------------------------------~~~~~Y~~sK~~~e~~~~~~ 157 (311)
T 2p5y_A 123 GEVPEG----ERAEETWPP-----------------------------------------RPKSPYAASKAAFEHYLSVY 157 (311)
T ss_dssp CCCCTT----CCBCTTSCC-----------------------------------------CCCSHHHHHHHHHHHHHHHH
T ss_pred CCCCCC----CCcCCCCCC-----------------------------------------CCCChHHHHHHHHHHHHHHH
Confidence 75 211 122221111 34578999999999999876
Q ss_pred --hcCCcEEEEecCccccCCCCCCCcccccccccHHHHHHhhcCCceeec-----cCCCceeeeeeHHHHHHHHHHHHHH
Q 010075 246 --KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLV-----GETKVIMDVIPVDMVVNAMIVAMVA 318 (519)
Q Consensus 246 --~~~lp~~IvRPs~V~g~~~~p~~gw~~~~~~~~~~i~~~~~g~~~~~~-----~~~~~~~d~vpVDdva~aii~a~~~ 318 (519)
..+++++++||+.|||+...+... ......++..+..|....++ +++...+++++++|+|++++.++..
T Consensus 158 ~~~~~~~~~~lrp~~v~Gp~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~a~~~~~~~ 233 (311)
T 2p5y_A 158 GQSYGLKWVSLRYGNVYGPRQDPHGE----AGVVAIFAERVLKGLPVTLYARKTPGDEGCVRDYVYVGDVAEAHALALFS 233 (311)
T ss_dssp HHHHCCCEEEEEECEEECTTCCSSST----THHHHHHHHHHHHTCCEEEECSSSTTSCCCEECEEEHHHHHHHHHHHHHH
T ss_pred HHHcCCCEEEEeeccccCcCCCCCCc----CcHHHHHHHHHHcCCCcEEEecccCCCCCeEEeeEEHHHHHHHHHHHHhC
Confidence 358999999999999987632110 01223344555566665566 7888899999999999999998864
Q ss_pred hccCCCCCcEEEecCCCCCchhHHHHHH
Q 010075 319 HAKQPSDANIYHVGSSLRNPVTLGLQVA 346 (519)
Q Consensus 319 ~~~~~~~~~iyni~s~~~~~i~~~~~~~ 346 (519)
. +++||++++...++..+...+
T Consensus 234 ~------~~~~~i~~~~~~s~~e~~~~i 255 (311)
T 2p5y_A 234 L------EGIYNVGTGEGHTTREVLMAV 255 (311)
T ss_dssp C------CEEEEESCSCCEEHHHHHHHH
T ss_pred C------CCEEEeCCCCCccHHHHHHHH
Confidence 2 479999998766644444443
|
| >2b69_A UDP-glucuronate decarboxylase 1; UDP-glucoronic acid decarboxylase, structural genomics, STRU genomics consortium, SGC, lyase; HET: MSE NAD UDP; 1.21A {Homo sapiens} SCOP: c.2.1.2 PDB: 4ef7_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=2e-27 Score=242.49 Aligned_cols=247 Identities=16% Similarity=0.166 Sum_probs=179.8
Q ss_pred cCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 010075 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (519)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (519)
+++|+|||||||||||++|+++|++.| .+|+++.|...+... .+. . + ....++.+
T Consensus 25 ~~~~~vlVtGatG~iG~~l~~~L~~~g---~~V~~~~r~~~~~~~--~~~-------------~-----~--~~~~~~~~ 79 (343)
T 2b69_A 25 KDRKRILITGGAGFVGSHLTDKLMMDG---HEVTVVDNFFTGRKR--NVE-------------H-----W--IGHENFEL 79 (343)
T ss_dssp --CCEEEEETTTSHHHHHHHHHHHHTT---CEEEEEECCSSCCGG--GTG-------------G-----G--TTCTTEEE
T ss_pred cCCCEEEEEcCccHHHHHHHHHHHHCC---CEEEEEeCCCccchh--hhh-------------h-----h--ccCCceEE
Confidence 578999999999999999999999988 688999997543210 000 0 0 00256899
Q ss_pred EeccCCCCCCCCChhhhHHHHhcCccEEEEcCccCCc---cccHHHHHHHhHHHHHHHHHHHHhccCCceEEEEecceee
Q 010075 90 VPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF---DERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAYVA 166 (519)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~~~vdiViH~Aa~v~f---~~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V~vSTa~v~ 166 (519)
+.+|+.++. +.++|+|||+||.... ..+....+++|+.|+.+++++|++. +. +|||+||+++|
T Consensus 80 ~~~D~~~~~------------~~~~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~-~~-~~v~~SS~~v~ 145 (343)
T 2b69_A 80 INHDVVEPL------------YIEVDQIYHLASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRV-GA-RLLLASTSEVY 145 (343)
T ss_dssp EECCTTSCC------------CCCCSEEEECCSCCSHHHHTTCHHHHHHHHHHHHHHHHHHHHHH-TC-EEEEEEEGGGG
T ss_pred EeCccCChh------------hcCCCEEEECccccCchhhhhCHHHHHHHHHHHHHHHHHHHHHh-CC-cEEEECcHHHh
Confidence 999998532 3579999999998653 3467788999999999999999986 54 89999999999
Q ss_pred cCcCC-eeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcHHHHHHHHHHHHHHHh
Q 010075 167 GERTG-LILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLMQQS 245 (519)
Q Consensus 167 ~~~~~-~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~Y~~sK~~aE~lv~~~ 245 (519)
+...+ .++|..+.+..+ ..+.+.|+.||+.+|++++.+
T Consensus 146 g~~~~~~~~E~~~~~~~~-----------------------------------------~~~~~~Y~~sK~~~E~~~~~~ 184 (343)
T 2b69_A 146 GDPEVHPQSEDYWGHVNP-----------------------------------------IGPRACYDEGKRVAETMCYAY 184 (343)
T ss_dssp BSCSSSSBCTTCCCBCCS-----------------------------------------SSTTHHHHHHHHHHHHHHHHH
T ss_pred CCCCCCCCcccccccCCC-----------------------------------------CCCCCchHHHHHHHHHHHHHH
Confidence 86432 334432211111 134578999999999999876
Q ss_pred --hcCCcEEEEecCccccCCCCCCCcccccccccHHHHHHhhcCCceeeccCCCceeeeeeHHHHHHHHHHHHHHhccCC
Q 010075 246 --KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMIVAMVAHAKQP 323 (519)
Q Consensus 246 --~~~lp~~IvRPs~V~g~~~~p~~gw~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~d~vpVDdva~aii~a~~~~~~~~ 323 (519)
..+++++++||+.|||+...+..+ .....++..+..|....++++++..+++++|+|+|++++.++...
T Consensus 185 ~~~~~~~~~ilrp~~v~G~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~a~~~~~~~~---- 255 (343)
T 2b69_A 185 MKQEGVEVRVARIFNTFGPRMHMNDG-----RVVSNFILQALQGEPLTVYGSGSQTRAFQYVSDLVNGLVALMNSN---- 255 (343)
T ss_dssp HHHHCCCEEEEEECCEECTTCCTTCC-----CHHHHHHHHHHHTCCEEEESSSCCEEECEEHHHHHHHHHHHHTSS----
T ss_pred HHHhCCcEEEEEEcceeCcCCCCCcc-----cHHHHHHHHHHcCCCceEcCCCCeEEeeEeHHHHHHHHHHHHhcC----
Confidence 458999999999999987643211 223345556666766667888899999999999999999887532
Q ss_pred CCCcEEEecCCCCCchhHHHHHH
Q 010075 324 SDANIYHVGSSLRNPVTLGLQVA 346 (519)
Q Consensus 324 ~~~~iyni~s~~~~~i~~~~~~~ 346 (519)
.+++||++++...++..+...+
T Consensus 256 -~~~~~~i~~~~~~s~~e~~~~i 277 (343)
T 2b69_A 256 -VSSPVNLGNPEEHTILEFAQLI 277 (343)
T ss_dssp -CCSCEEESCCCEEEHHHHHHHH
T ss_pred -CCCeEEecCCCCCcHHHHHHHH
Confidence 1468999998655543344443
|
| >2gn4_A FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann fold, TYK triad, SDR, enzyme, NADP, NADPH, lyase; HET: NDP UD1 MES; 1.90A {Helicobacter pylori} PDB: 2gn6_A* 2gn8_A* 2gn9_A* 2gna_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=2.1e-27 Score=243.05 Aligned_cols=227 Identities=19% Similarity=0.238 Sum_probs=171.2
Q ss_pred CCCcchhhhcCCCEEEEeCCccHHHHHHHHHHHHh-CCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccc
Q 010075 1 MELGSVVEFLENKTILVSGVTGFVAKVFIEKILRV-QPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRL 79 (519)
Q Consensus 1 ~~~~~i~~~~~~k~VlITGaTGFlG~~Lv~~LL~~-g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~ 79 (519)
|.++++.+++++|+|||||||||||++++++|++. |+ .+|+++.|+... .+.+. ++.+
T Consensus 10 ~~~~~~~~~~~~k~vlVTGatG~iG~~l~~~L~~~~g~--~~V~~~~r~~~~---~~~~~-------------~~~~--- 68 (344)
T 2gn4_A 10 MSMPNHQNMLDNQTILITGGTGSFGKCFVRKVLDTTNA--KKIIVYSRDELK---QSEMA-------------MEFN--- 68 (344)
T ss_dssp ------CCTTTTCEEEEETTTSHHHHHHHHHHHHHCCC--SEEEEEESCHHH---HHHHH-------------HHHC---
T ss_pred CCCccHHHhhCCCEEEEECCCcHHHHHHHHHHHhhCCC--CEEEEEECChhh---HHHHH-------------HHhc---
Confidence 34677889999999999999999999999999998 73 488999996422 11221 1111
Q ss_pred ccccCCceEEEeccCCCCCCCCChhhhHHHHhcCccEEEEcCccCCc---cccHHHHHHHhHHHHHHHHHHHHhccCCce
Q 010075 80 NSFISEKITFVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF---DERYDVAFGINTLGVIHLVNFAKKCVKLKV 156 (519)
Q Consensus 80 ~~~~~~~v~~v~gDl~~~~lgls~~~~~~~l~~~vdiViH~Aa~v~f---~~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~ 156 (519)
..++.++.+|+++ .+....+++++|+|||+||.... .......+++|+.|+.+++++|.+. ++++
T Consensus 69 ----~~~v~~~~~Dl~d-------~~~l~~~~~~~D~Vih~Aa~~~~~~~~~~~~~~~~~Nv~gt~~l~~aa~~~-~v~~ 136 (344)
T 2gn4_A 69 ----DPRMRFFIGDVRD-------LERLNYALEGVDICIHAAALKHVPIAEYNPLECIKTNIMGASNVINACLKN-AISQ 136 (344)
T ss_dssp ----CTTEEEEECCTTC-------HHHHHHHTTTCSEEEECCCCCCHHHHHHSHHHHHHHHHHHHHHHHHHHHHT-TCSE
T ss_pred ----CCCEEEEECCCCC-------HHHHHHHHhcCCEEEECCCCCCCCchhcCHHHHHHHHHHHHHHHHHHHHhC-CCCE
Confidence 2578999999994 44455788899999999998653 2456788999999999999999986 7899
Q ss_pred EEEEecceeecCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcHHHHHHH
Q 010075 157 FVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKT 236 (519)
Q Consensus 157 ~V~vSTa~v~~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~Y~~sK~ 236 (519)
||++||..++ .+.+.|+.||+
T Consensus 137 ~V~~SS~~~~-----------------------------------------------------------~p~~~Y~~sK~ 157 (344)
T 2gn4_A 137 VIALSTDKAA-----------------------------------------------------------NPINLYGATKL 157 (344)
T ss_dssp EEEECCGGGS-----------------------------------------------------------SCCSHHHHHHH
T ss_pred EEEecCCccC-----------------------------------------------------------CCccHHHHHHH
Confidence 9999996432 23478999999
Q ss_pred HHHHHHHHhh-----cCCcEEEEecCccccCCCCCCCcccccccccHHHHHHhhcCC-ceeeccCCCceeeeeeHHHHHH
Q 010075 237 MGEMLMQQSK-----ENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGN-LRCLVGETKVIMDVIPVDMVVN 310 (519)
Q Consensus 237 ~aE~lv~~~~-----~~lp~~IvRPs~V~g~~~~p~~gw~~~~~~~~~~i~~~~~g~-~~~~~~~~~~~~d~vpVDdva~ 310 (519)
.+|.++..+. .+++++++|||.|+|+... ....++..+..|. ...+ .+++..+++++++|+|+
T Consensus 158 ~~E~~~~~~~~~~~~~g~~~~~vRpg~v~g~~~~----------~i~~~~~~~~~g~~~~~i-~~~~~~r~~i~v~D~a~ 226 (344)
T 2gn4_A 158 CSDKLFVSANNFKGSSQTQFSVVRYGNVVGSRGS----------VVPFFKKLVQNKASEIPI-TDIRMTRFWITLDEGVS 226 (344)
T ss_dssp HHHHHHHHGGGCCCSSCCEEEEECCCEETTCTTS----------HHHHHHHHHHHTCCCEEE-SCTTCEEEEECHHHHHH
T ss_pred HHHHHHHHHHHHhCCCCcEEEEEEeccEECCCCC----------HHHHHHHHHHcCCCceEE-eCCCeEEeeEEHHHHHH
Confidence 9999999873 5799999999999997642 2223444555565 3344 36778899999999999
Q ss_pred HHHHHHHHhccCCCCCcEEEecCC
Q 010075 311 AMIVAMVAHAKQPSDANIYHVGSS 334 (519)
Q Consensus 311 aii~a~~~~~~~~~~~~iyni~s~ 334 (519)
+++.++.... .+++||++++
T Consensus 227 ~v~~~l~~~~----~g~~~~~~~~ 246 (344)
T 2gn4_A 227 FVLKSLKRMH----GGEIFVPKIP 246 (344)
T ss_dssp HHHHHHHHCC----SSCEEEECCC
T ss_pred HHHHHHhhcc----CCCEEecCCC
Confidence 9999987532 2579998765
|
| >3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT} | Back alignment and structure |
|---|
Probab=99.96 E-value=4.1e-28 Score=241.21 Aligned_cols=225 Identities=14% Similarity=0.070 Sum_probs=166.2
Q ss_pred cCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 010075 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (519)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (519)
|++|+||||| +||||++|++.|++.| .+|+++.|+.... ..++++
T Consensus 1 M~~~~ilVtG-aG~iG~~l~~~L~~~g---~~V~~~~r~~~~~-------------------------------~~~~~~ 45 (286)
T 3gpi_A 1 MSLSKILIAG-CGDLGLELARRLTAQG---HEVTGLRRSAQPM-------------------------------PAGVQT 45 (286)
T ss_dssp -CCCCEEEEC-CSHHHHHHHHHHHHTT---CCEEEEECTTSCC-------------------------------CTTCCE
T ss_pred CCCCcEEEEC-CCHHHHHHHHHHHHCC---CEEEEEeCCcccc-------------------------------ccCCce
Confidence 3568999999 5999999999999998 5789999975431 257889
Q ss_pred EeccCCCCCCCCChhhhHHHHhcC-ccEEEEcCccCCccccHHHHHHHhHHHHHHHHHHHHhccCCceEEEEecceeecC
Q 010075 90 VPGDISSEDLGLKDSNLKEELWNE-LDIMVNSAAITKFDERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAYVAGE 168 (519)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~~~-vdiViH~Aa~v~f~~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V~vSTa~v~~~ 168 (519)
+.+|++++ .+. ..++++ +|+|||+||.. ..+.+..+++|+.|+.+++++|++. ++++|||+||+.+|+.
T Consensus 46 ~~~Dl~d~------~~~-~~~~~~~~d~vih~a~~~--~~~~~~~~~~n~~~~~~ll~a~~~~-~~~~~v~~SS~~vyg~ 115 (286)
T 3gpi_A 46 LIADVTRP------DTL-ASIVHLRPEILVYCVAAS--EYSDEHYRLSYVEGLRNTLSALEGA-PLQHVFFVSSTGVYGQ 115 (286)
T ss_dssp EECCTTCG------GGC-TTGGGGCCSEEEECHHHH--HHC-----CCSHHHHHHHHHHTTTS-CCCEEEEEEEGGGCCC
T ss_pred EEccCCCh------HHH-HHhhcCCCCEEEEeCCCC--CCCHHHHHHHHHHHHHHHHHHHhhC-CCCEEEEEcccEEEcC
Confidence 99999963 222 345555 99999999974 3456677899999999999999985 8899999999999987
Q ss_pred cCC-eeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcHHHHHHHHHHHHHHHhhc
Q 010075 169 RTG-LILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLMQQSKE 247 (519)
Q Consensus 169 ~~~-~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~Y~~sK~~aE~lv~~~~~ 247 (519)
..+ .++|. .+. .+.+.|+.||+.+|++ .++
T Consensus 116 ~~~~~~~E~-----~~~-----------------------------------------~p~~~Y~~sK~~~E~~-~~~-- 146 (286)
T 3gpi_A 116 EVEEWLDED-----TPP-----------------------------------------IAKDFSGKRMLEAEAL-LAA-- 146 (286)
T ss_dssp CCSSEECTT-----SCC-----------------------------------------CCCSHHHHHHHHHHHH-GGG--
T ss_pred CCCCCCCCC-----CCC-----------------------------------------CCCChhhHHHHHHHHH-Hhc--
Confidence 543 22332 221 4568999999999999 664
Q ss_pred CCcEEEEecCccccCCCCCCCcccccccccHHHHHHhhcCCceeeccCCCceeeeeeHHHHHHHHHHHHHHhccCCCCCc
Q 010075 248 NLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMIVAMVAHAKQPSDAN 327 (519)
Q Consensus 248 ~lp~~IvRPs~V~g~~~~p~~gw~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~d~vpVDdva~aii~a~~~~~~~~~~~~ 327 (519)
++++++||+.|||+... .++..+.. ....++++...++||++|+|++++.++...... ..++
T Consensus 147 -~~~~ilR~~~v~G~~~~-------------~~~~~~~~---~~~~~~~~~~~~~i~v~Dva~~~~~~~~~~~~~-~~~~ 208 (286)
T 3gpi_A 147 -YSSTILRFSGIYGPGRL-------------RMIRQAQT---PEQWPARNAWTNRIHRDDGAAFIAYLIQQRSHA-VPER 208 (286)
T ss_dssp -SSEEEEEECEEEBTTBC-------------HHHHHTTC---GGGSCSSBCEECEEEHHHHHHHHHHHHHHHTTS-CCCS
T ss_pred -CCeEEEecccccCCCch-------------hHHHHHHh---cccCCCcCceeEEEEHHHHHHHHHHHHhhhccC-CCCc
Confidence 99999999999998752 12333333 223477889999999999999999999864211 1368
Q ss_pred EEEecCCCCCchhHHHHHH
Q 010075 328 IYHVGSSLRNPVTLGLQVA 346 (519)
Q Consensus 328 iyni~s~~~~~i~~~~~~~ 346 (519)
+||++++...++..+...+
T Consensus 209 ~~~~~~~~~~s~~e~~~~i 227 (286)
T 3gpi_A 209 LYIVTDNQPLPVHDLLRWL 227 (286)
T ss_dssp EEEECCSCCEEHHHHHHHH
T ss_pred eEEEeCCCCCCHHHHHHHH
Confidence 9999998665544444443
|
| >2x6t_A ADP-L-glycero-D-manno-heptose-6-epimerase; isomerase, carbohydrate metabolism, stress response; HET: NAP ADP BMA; 2.36A {Escherichia coli} PDB: 2x86_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=1.6e-27 Score=244.39 Aligned_cols=244 Identities=14% Similarity=0.156 Sum_probs=177.8
Q ss_pred cCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 010075 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (519)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (519)
+++|+|||||||||||++|+++|++.|. .+|+++.|....... +. ..++.
T Consensus 44 ~~~~~vlVtGatG~iG~~l~~~L~~~g~--~~V~~~~r~~~~~~~-~~--------------------------~~~~~- 93 (357)
T 2x6t_A 44 IEGRMIIVTGGAGFIGSNIVKALNDKGI--TDILVVDNLKDGTKF-VN--------------------------LVDLN- 93 (357)
T ss_dssp ----CEEEETTTSHHHHHHHHHHHHTTC--CCEEEEECCSSGGGG-GG--------------------------TTTSC-
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCC--cEEEEEecCCCcchh-hc--------------------------ccCce-
Confidence 5678999999999999999999999872 467888887643210 00 01223
Q ss_pred EeccCCCCCCCCChhhhHHHHhc-----CccEEEEcCccCCc-cccHHHHHHHhHHHHHHHHHHHHhccCCceEEEEecc
Q 010075 90 VPGDISSEDLGLKDSNLKEELWN-----ELDIMVNSAAITKF-DERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTA 163 (519)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~~-----~vdiViH~Aa~v~f-~~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V~vSTa 163 (519)
+.+|++ +.+..+.+.+ ++|+|||+||.... .++.+..+++|+.|+.+++++|++. ++ +|||+||.
T Consensus 94 ~~~d~~-------~~~~~~~~~~~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~n~~~~~~ll~a~~~~-~~-r~V~~SS~ 164 (357)
T 2x6t_A 94 IADYMD-------KEDFLIQIMAGEEFGDVEAIFHEGACSSTTEWDGKYMMDNNYQYSKELLHYCLER-EI-PFLYASSA 164 (357)
T ss_dssp CSEEEE-------HHHHHHHHHTTCCCSSCCEEEECCSCCCTTCCCHHHHHHHTHHHHHHHHHHHHHH-TC-CEEEEEEG
T ss_pred EeeecC-------cHHHHHHHHhhcccCCCCEEEECCcccCCccCCHHHHHHHHHHHHHHHHHHHHHc-CC-eEEEEcch
Confidence 678888 4454556665 59999999998764 4567888999999999999999986 67 99999999
Q ss_pred eeecCcCC-eeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcHHHHHHHHHHHHH
Q 010075 164 YVAGERTG-LILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLM 242 (519)
Q Consensus 164 ~v~~~~~~-~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~Y~~sK~~aE~lv 242 (519)
.+|+...+ .++|.. + ..+.+.|+.||+.+|+++
T Consensus 165 ~v~g~~~~~~~~E~~-----~-----------------------------------------~~p~~~Y~~sK~~~E~~~ 198 (357)
T 2x6t_A 165 ATYGGRTSDFIESRE-----Y-----------------------------------------EKPLNVFGYSKFLFDEYV 198 (357)
T ss_dssp GGGCSCSSCCCSSGG-----G-----------------------------------------CCCSSHHHHHHHHHHHHH
T ss_pred HHhCCCCCCCcCCcC-----C-----------------------------------------CCCCChhHHHHHHHHHHH
Confidence 99986432 222221 1 145679999999999999
Q ss_pred HHh--hcCCcEEEEecCccccCCCCCCCcccccccccHHHHHHhhcCCceeeccCCCc-eeeeeeHHHHHHHHHHHHHHh
Q 010075 243 QQS--KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKV-IMDVIPVDMVVNAMIVAMVAH 319 (519)
Q Consensus 243 ~~~--~~~lp~~IvRPs~V~g~~~~p~~gw~~~~~~~~~~i~~~~~g~~~~~~~~~~~-~~d~vpVDdva~aii~a~~~~ 319 (519)
+.+ ..+++++++||+.|||+...+. +... .....++..+..|....++++++. .+++++++|+|++++.++...
T Consensus 199 ~~~~~~~g~~~~ilRp~~v~Gp~~~~~-~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~ai~~~~~~~ 275 (357)
T 2x6t_A 199 RQILPEANSQIVGFRYFNVYGPREGHK-GSMA--SVAFHLNTQLNNGESPKLFEGSENFKRDFVYVGDVADVNLWFLENG 275 (357)
T ss_dssp HHHGGGCSSCEEEEEECEEESSSCTTC-GGGS--CHHHHHHHHHHTTCCCEEETTGGGCEECEEEHHHHHHHHHHHHHHC
T ss_pred HHHHHHcCCCEEEEecCeEECCCCCCC-cccc--hHHHHHHHHHHcCCCcEEeCCCCcceEccEEHHHHHHHHHHHHhcC
Confidence 987 3479999999999999876431 1111 223345566667766666788888 999999999999999998753
Q ss_pred ccCCCCCcEEEecCCCCCchhHHHHHH
Q 010075 320 AKQPSDANIYHVGSSLRNPVTLGLQVA 346 (519)
Q Consensus 320 ~~~~~~~~iyni~s~~~~~i~~~~~~~ 346 (519)
. +++||++++...++..+...+
T Consensus 276 ~-----~~~~~i~~~~~~s~~e~~~~i 297 (357)
T 2x6t_A 276 V-----SGIFNLGTGRAESFQAVADAT 297 (357)
T ss_dssp C-----CEEEEESCSCCEEHHHHHHHH
T ss_pred C-----CCeEEecCCCcccHHHHHHHH
Confidence 2 579999998665544444443
|
| >1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A | Back alignment and structure |
|---|
Probab=99.96 E-value=8.7e-28 Score=244.09 Aligned_cols=249 Identities=16% Similarity=0.130 Sum_probs=173.5
Q ss_pred chhhhcCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccC
Q 010075 5 SVVEFLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFIS 84 (519)
Q Consensus 5 ~i~~~~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~ 84 (519)
++..++++|+|||||||||||++|+++|++.| .+|+++.|+... .+++.+ .+.... .
T Consensus 4 ~~~~~~~~~~vlVTGatG~iG~~l~~~L~~~g---~~V~~~~r~~~~---~~~~~~---------~~~~~~--------~ 60 (342)
T 1y1p_A 4 DNAVLPEGSLVLVTGANGFVASHVVEQLLEHG---YKVRGTARSASK---LANLQK---------RWDAKY--------P 60 (342)
T ss_dssp TTCSSCTTCEEEEETTTSHHHHHHHHHHHHTT---CEEEEEESSHHH---HHHHHH---------HHHHHS--------T
T ss_pred CcccCCCCCEEEEECCccHHHHHHHHHHHHCC---CEEEEEeCCccc---HHHHHH---------HhhccC--------C
Confidence 45667899999999999999999999999988 688999996432 122221 111111 1
Q ss_pred CceEEE-eccCCCCCCCCChhhhHHHHhcCccEEEEcCccCCccccHHHHHHHhHHHHHHHHHHHHhccCCceEEEEecc
Q 010075 85 EKITFV-PGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKFDERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTA 163 (519)
Q Consensus 85 ~~v~~v-~gDl~~~~lgls~~~~~~~l~~~vdiViH~Aa~v~f~~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V~vSTa 163 (519)
.+++++ .+|++++ +....+++++|+|||+||.....++....+++|+.|+.+++++|.+..++++|||+||.
T Consensus 61 ~~~~~~~~~D~~d~-------~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~n~~g~~~ll~~~~~~~~~~~iv~~SS~ 133 (342)
T 1y1p_A 61 GRFETAVVEDMLKQ-------GAYDEVIKGAAGVAHIASVVSFSNKYDEVVTPAIGGTLNALRAAAATPSVKRFVLTSST 133 (342)
T ss_dssp TTEEEEECSCTTST-------TTTTTTTTTCSEEEECCCCCSCCSCHHHHHHHHHHHHHHHHHHHHTCTTCCEEEEECCG
T ss_pred CceEEEEecCCcCh-------HHHHHHHcCCCEEEEeCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhCCCCcEEEEeccH
Confidence 468888 8999963 22235667899999999988777778889999999999999999854478999999999
Q ss_pred eeecCcC-----CeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcHHHHHHHHH
Q 010075 164 YVAGERT-----GLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMG 238 (519)
Q Consensus 164 ~v~~~~~-----~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~Y~~sK~~a 238 (519)
++++... ..++|..+ .+..... ... ..+.....+.+.|+.||+.+
T Consensus 134 ~~~~~~~~~~~~~~~~E~~~-----~~~~~~~----------------------~~~---~~~~~~~~~~~~Y~~sK~~~ 183 (342)
T 1y1p_A 134 VSALIPKPNVEGIYLDEKSW-----NLESIDK----------------------AKT---LPESDPQKSLWVYAASKTEA 183 (342)
T ss_dssp GGTCCCCTTCCCCEECTTCC-----CHHHHHH----------------------HHH---SCTTSTTHHHHHHHHHHHHH
T ss_pred HHhcCCCCCCCCcccCcccc-----Cchhhhh----------------------hcc---ccccccccchHHHHHHHHHH
Confidence 8885421 23344322 1110000 000 00000012346899999999
Q ss_pred HHHHHHhh----cCCcEEEEecCccccCCCCCCCcccccccccHHHHHHhhcCCceeeccCCCceeeeeeHHHHHHHHHH
Q 010075 239 EMLMQQSK----ENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMIV 314 (519)
Q Consensus 239 E~lv~~~~----~~lp~~IvRPs~V~g~~~~p~~gw~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~d~vpVDdva~aii~ 314 (519)
|.+++.+. .+++++++||+.|||+...+... . .....++..+..|....+.+++ ...++++|+|+|++++.
T Consensus 184 e~~~~~~~~~~~~~~~~~~~rp~~v~g~~~~~~~~---~-~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~v~Dva~a~~~ 258 (342)
T 1y1p_A 184 ELAAWKFMDENKPHFTLNAVLPNYTIGTIFDPETQ---S-GSTSGWMMSLFNGEVSPALALM-PPQYYVSAVDIGLLHLG 258 (342)
T ss_dssp HHHHHHHHHHHCCSSEEEEEEESEEECCCSCTTTC---C-CHHHHHHHHHHTTCCCHHHHTC-CSEEEEEHHHHHHHHHH
T ss_pred HHHHHHHHHhcCCCceEEEEcCCceECCCCCCCCC---C-ccHHHHHHHHHcCCCccccccC-CcCCEeEHHHHHHHHHH
Confidence 99998762 37899999999999997654211 0 1344556666667655555554 67899999999999999
Q ss_pred HHHH
Q 010075 315 AMVA 318 (519)
Q Consensus 315 a~~~ 318 (519)
++..
T Consensus 259 ~~~~ 262 (342)
T 1y1p_A 259 CLVL 262 (342)
T ss_dssp HHHC
T ss_pred HHcC
Confidence 8864
|
| >3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis} | Back alignment and structure |
|---|
Probab=99.96 E-value=1e-28 Score=248.72 Aligned_cols=237 Identities=16% Similarity=0.126 Sum_probs=170.8
Q ss_pred cCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccc-cCCceE
Q 010075 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSF-ISEKIT 88 (519)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~-~~~~v~ 88 (519)
+.+|+|||||||||||++|++.|++.| .+|+++.|+....... ...+... ...+++
T Consensus 5 ~~~~~vlVtGatG~iG~~l~~~L~~~g---~~V~~~~r~~~~~~~~--------------------~~~~~~~~~~~~~~ 61 (321)
T 3vps_A 5 TLKHRILITGGAGFIGGHLARALVASG---EEVTVLDDLRVPPMIP--------------------PEGTGKFLEKPVLE 61 (321)
T ss_dssp --CCEEEEETTTSHHHHHHHHHHHHTT---CCEEEECCCSSCCSSC--------------------CTTSSEEECSCGGG
T ss_pred cCCCeEEEECCCChHHHHHHHHHHHCC---CEEEEEecCCcccccc--------------------hhhhhhhccCCCee
Confidence 347899999999999999999999998 5789999976521000 0000000 012233
Q ss_pred EEeccCCCCCCCCChhhhHHHHhcCccEEEEcCccCCc---cccHHHHHHHhHHHHHHHHHHHHhccCCceEEEEeccee
Q 010075 89 FVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF---DERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAYV 165 (519)
Q Consensus 89 ~v~gDl~~~~lgls~~~~~~~l~~~vdiViH~Aa~v~f---~~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V~vSTa~v 165 (519)
++.+|++ ++|+|||+||.... .......++ |+.|+.+++++|++. ++++|||+||.++
T Consensus 62 ~~~~Dl~-----------------~~d~vi~~a~~~~~~~~~~~~~~~~~-n~~~~~~ll~a~~~~-~v~~~v~~SS~~v 122 (321)
T 3vps_A 62 LEERDLS-----------------DVRLVYHLASHKSVPRSFKQPLDYLD-NVDSGRHLLALCTSV-GVPKVVVGSTCEV 122 (321)
T ss_dssp CCHHHHT-----------------TEEEEEECCCCCCHHHHTTSTTTTHH-HHHHHHHHHHHHHHH-TCCEEEEEEEGGG
T ss_pred EEeCccc-----------------cCCEEEECCccCChHHHHhCHHHHHH-HHHHHHHHHHHHHHc-CCCeEEEecCHHH
Confidence 3334433 79999999998763 233344566 999999999999997 6899999999999
Q ss_pred ecCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcHHHHHHHHHHHHHHHh
Q 010075 166 AGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLMQQS 245 (519)
Q Consensus 166 ~~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~Y~~sK~~aE~lv~~~ 245 (519)
|+...+ .++.|+.+. .+.+.|+.||+.+|++++.+
T Consensus 123 ~~~~~~----~~~~E~~~~-----------------------------------------~p~~~Y~~sK~~~E~~~~~~ 157 (321)
T 3vps_A 123 YGQADT----LPTPEDSPL-----------------------------------------SPRSPYAASKVGLEMVAGAH 157 (321)
T ss_dssp GCSCSS----SSBCTTSCC-----------------------------------------CCCSHHHHHHHHHHHHHHHH
T ss_pred hCCCCC----CCCCCCCCC-----------------------------------------CCCChhHHHHHHHHHHHHHH
Confidence 987542 222222221 45689999999999999987
Q ss_pred --hcCC-cEEEEecCccccCCCCCCCcccccccccHHHHHHhhcCCceeeccCCCceeeeeeHHHHHHHHHHHHHHhccC
Q 010075 246 --KENL-SLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMIVAMVAHAKQ 322 (519)
Q Consensus 246 --~~~l-p~~IvRPs~V~g~~~~p~~gw~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~d~vpVDdva~aii~a~~~~~~~ 322 (519)
..++ +++++||+.|||+...+ . .....++..+..|....++++++..+++||++|+|++++.++....
T Consensus 158 ~~~~~~~~~~ilRp~~v~G~~~~~-~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~-- 228 (321)
T 3vps_A 158 QRASVAPEVGIVRFFNVYGPGERP-D------ALVPRLCANLLTRNELPVEGDGEQRRDFTYITDVVDKLVALANRPL-- 228 (321)
T ss_dssp HHSSSSCEEEEEEECEEECTTCCT-T------SHHHHHHHHHHHHSEEEEETTSCCEECEEEHHHHHHHHHHGGGSCC--
T ss_pred HHHcCCCceEEEEeccccCcCCCC-C------ChHHHHHHHHHcCCCeEEeCCCCceEceEEHHHHHHHHHHHHhcCC--
Confidence 3578 99999999999987643 1 2344566666777777788999999999999999999999886322
Q ss_pred CCCCcEEEecCCCCCchhHHHHH
Q 010075 323 PSDANIYHVGSSLRNPVTLGLQV 345 (519)
Q Consensus 323 ~~~~~iyni~s~~~~~i~~~~~~ 345 (519)
.+ +||++++...++..+...
T Consensus 229 --~g-~~~i~~~~~~s~~e~~~~ 248 (321)
T 3vps_A 229 --PS-VVNFGSGQSLSVNDVIRI 248 (321)
T ss_dssp --CS-EEEESCSCCEEHHHHHHH
T ss_pred --CC-eEEecCCCcccHHHHHHH
Confidence 24 999999866554333333
|
| >1e6u_A GDP-fucose synthetase; epimerase/reductase, SDR, RED; HET: NAP; 1.45A {Escherichia coli} SCOP: c.2.1.2 PDB: 1e7q_A* 1bsv_A* 1fxs_A* 1gfs_A 1e7s_A* 1bws_A* 1e7r_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=1.5e-27 Score=240.64 Aligned_cols=239 Identities=13% Similarity=0.100 Sum_probs=171.4
Q ss_pred CCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEE
Q 010075 11 ENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFV 90 (519)
Q Consensus 11 ~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v 90 (519)
.+|+|||||||||||++|+++|++.| .+|+++.|+.
T Consensus 2 ~~~~ilVtGatG~iG~~l~~~L~~~g---~~v~~~~r~~----------------------------------------- 37 (321)
T 1e6u_A 2 AKQRVFIAGHRGMVGSAIRRQLEQRG---DVELVLRTRD----------------------------------------- 37 (321)
T ss_dssp CCEEEEEETTTSHHHHHHHHHHTTCT---TEEEECCCTT-----------------------------------------
T ss_pred CCCEEEEECCCcHHHHHHHHHHHhCC---CeEEEEecCc-----------------------------------------
Confidence 46899999999999999999999988 5677776641
Q ss_pred eccCCCCCCCCChhhhHHHHhc--CccEEEEcCccCCc----cccHHHHHHHhHHHHHHHHHHHHhccCCceEEEEecce
Q 010075 91 PGDISSEDLGLKDSNLKEELWN--ELDIMVNSAAITKF----DERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAY 164 (519)
Q Consensus 91 ~gDl~~~~lgls~~~~~~~l~~--~vdiViH~Aa~v~f----~~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V~vSTa~ 164 (519)
.+|+++ .+....+++ ++|+|||+||.... ..+....+++|+.|+.+++++|++. ++++|||+||..
T Consensus 38 ~~D~~d-------~~~~~~~~~~~~~d~vih~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~~v~~SS~~ 109 (321)
T 1e6u_A 38 ELNLLD-------SRAVHDFFASERIDQVYLAAAKVGGIVANNTYPADFIYQNMMIESNIIHAAHQN-DVNKLLFLGSSC 109 (321)
T ss_dssp TCCTTC-------HHHHHHHHHHHCCSEEEECCCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHT-TCCEEEEECCGG
T ss_pred cCCccC-------HHHHHHHHHhcCCCEEEEcCeecCCcchhhhCHHHHHHHHHHHHHHHHHHHHHh-CCCeEEEEccHH
Confidence 368774 333446666 89999999998753 3567788999999999999999986 789999999999
Q ss_pred eecCcC-CeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCC-cHHHHHHHHHHHHH
Q 010075 165 VAGERT-GLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWP-NTYVFTKTMGEMLM 242 (519)
Q Consensus 165 v~~~~~-~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~-n~Y~~sK~~aE~lv 242 (519)
+|+... ..++|...... + ..+. +.|+.+|+.+|+++
T Consensus 110 vyg~~~~~~~~E~~~~~~-~-----------------------------------------~~p~~~~Y~~sK~~~E~~~ 147 (321)
T 1e6u_A 110 IYPKLAKQPMAESELLQG-T-----------------------------------------LEPTNEPYAIAKIAGIKLC 147 (321)
T ss_dssp GSCTTCCSSBCGGGTTSS-C-----------------------------------------CCGGGHHHHHHHHHHHHHH
T ss_pred HcCCCCCCCcCccccccC-C-----------------------------------------CCCCCCccHHHHHHHHHHH
Confidence 998643 13333321000 0 0222 58999999999999
Q ss_pred HHh--hcCCcEEEEecCccccCCCCCCCcccccccccHHHHHHhh----cC-CceeeccCCCceeeeeeHHHHHHHHHHH
Q 010075 243 QQS--KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASA----QG-NLRCLVGETKVIMDVIPVDMVVNAMIVA 315 (519)
Q Consensus 243 ~~~--~~~lp~~IvRPs~V~g~~~~p~~gw~~~~~~~~~~i~~~~----~g-~~~~~~~~~~~~~d~vpVDdva~aii~a 315 (519)
+.+ ..+++++++||+.|||+...+.+.. ...+..++..+. .| ....++++++..+++|||||+|++++.+
T Consensus 148 ~~~~~~~~~~~~ilrp~~v~G~~~~~~~~~---~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~i~v~Dva~~~~~~ 224 (321)
T 1e6u_A 148 ESYNRQYGRDYRSVMPTNLYGPHDNFHPSN---SHVIPALLRRFHEATAQKAPDVVVWGSGTPMREFLHVDDMAAASIHV 224 (321)
T ss_dssp HHHHHHHCCEEEEEEECEEESTTCCCCTTC---SSHHHHHHHHHHHHHHHTCSEEEEESCSCCEECEEEHHHHHHHHHHH
T ss_pred HHHHHHhCCCEEEEEeCCcCCcCCCCCCCC---CccHHHHHHHHHHhhhcCCCceEEcCCCCEEEEeEEHHHHHHHHHHH
Confidence 886 3589999999999999876432110 012233444333 24 4445678889999999999999999999
Q ss_pred HHHhccC-----CCCCcEEEecCCCCCchhHHHHHH
Q 010075 316 MVAHAKQ-----PSDANIYHVGSSLRNPVTLGLQVA 346 (519)
Q Consensus 316 ~~~~~~~-----~~~~~iyni~s~~~~~i~~~~~~~ 346 (519)
+...... ...+++||++++...++..+...+
T Consensus 225 ~~~~~~~~~~~~~~~~~~~ni~~~~~~s~~e~~~~i 260 (321)
T 1e6u_A 225 MELAHEVWLENTQPMLSHINVGTGVDCTIRELAQTI 260 (321)
T ss_dssp HHSCHHHHHHTSBTTBCCEEESCSCCEEHHHHHHHH
T ss_pred HhCcccccccccccCCceEEeCCCCCccHHHHHHHH
Confidence 8743221 011469999998665544344443
|
| >1eq2_A ADP-L-glycero-D-mannoheptose 6-epimerase; N-terminal domain rossmann fold, C-terminal mixed alpha/beta domain; HET: NAP ADQ; 2.00A {Escherichia coli} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.96 E-value=2e-27 Score=238.28 Aligned_cols=241 Identities=14% Similarity=0.138 Sum_probs=169.0
Q ss_pred EEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEEecc
Q 010075 14 TILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVPGD 93 (519)
Q Consensus 14 ~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v~gD 93 (519)
+|||||||||||++|+++|++.|. .+|+++.|+...... ..+ .++. +.+|
T Consensus 1 ~vlVtGatG~iG~~l~~~L~~~g~--~~V~~~~r~~~~~~~-~~~--------------------------~~~~-~~~d 50 (310)
T 1eq2_A 1 MIIVTGGAGFIGSNIVKALNDKGI--TDILVVDNLKDGTKF-VNL--------------------------VDLN-IADY 50 (310)
T ss_dssp CEEEETTTSHHHHHHHHHHHTTTC--CCEEEEECCSSGGGG-HHH--------------------------HTSC-CSEE
T ss_pred CEEEEcCccHHHHHHHHHHHHCCC--cEEEEEccCCCCchh-hhc--------------------------Ccce-eccc
Confidence 489999999999999999999872 467888887654311 111 1122 6788
Q ss_pred CCCCCCCCChhhhHHHHhc-----CccEEEEcCccCCc-cccHHHHHHHhHHHHHHHHHHHHhccCCceEEEEecceeec
Q 010075 94 ISSEDLGLKDSNLKEELWN-----ELDIMVNSAAITKF-DERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAYVAG 167 (519)
Q Consensus 94 l~~~~lgls~~~~~~~l~~-----~vdiViH~Aa~v~f-~~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V~vSTa~v~~ 167 (519)
++ +.+..+.+.+ ++|+|||+||.... .++.+..+++|+.|+.+++++|++. ++ +|||+||.++|+
T Consensus 51 ~~-------~~~~~~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~-~~-~~v~~SS~~v~g 121 (310)
T 1eq2_A 51 MD-------KEDFLIQIMAGEEFGDVEAIFHEGACSSTTEWDGKYMMDNNYQYSKELLHYCLER-EI-PFLYASSAATYG 121 (310)
T ss_dssp EE-------HHHHHHHHHTTCCCSSCCEEEECCSCCCTTCCCHHHHHHHTHHHHHHHHHHHHHH-TC-CEEEEEEGGGGT
T ss_pred cc-------cHHHHHHHHhccccCCCcEEEECcccccCcccCHHHHHHHHHHHHHHHHHHHHHc-CC-eEEEEeeHHHhC
Confidence 88 4454556665 49999999998754 3567888999999999999999986 67 999999999998
Q ss_pred CcCC-eeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcHHHHHHHHHHHHHHHh-
Q 010075 168 ERTG-LILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLMQQS- 245 (519)
Q Consensus 168 ~~~~-~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~Y~~sK~~aE~lv~~~- 245 (519)
...+ .++|.. + ..+.+.|+.+|+.+|.+++.+
T Consensus 122 ~~~~~~~~E~~-----~-----------------------------------------~~p~~~Y~~sK~~~e~~~~~~~ 155 (310)
T 1eq2_A 122 GRTSDFIESRE-----Y-----------------------------------------EKPLNVYGYSKFLFDEYVRQIL 155 (310)
T ss_dssp TCCSCBCSSGG-----G-----------------------------------------CCCSSHHHHHHHHHHHHHHHHG
T ss_pred CCCCCCCCCCC-----C-----------------------------------------CCCCChhHHHHHHHHHHHHHHH
Confidence 6542 222321 1 145679999999999999987
Q ss_pred -hcCCcEEEEecCccccCCCCCCCcccccccccHHHHHHhhcCCceeeccCCCc-eeeeeeHHHHHHHHHHHHHHhccCC
Q 010075 246 -KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKV-IMDVIPVDMVVNAMIVAMVAHAKQP 323 (519)
Q Consensus 246 -~~~lp~~IvRPs~V~g~~~~p~~gw~~~~~~~~~~i~~~~~g~~~~~~~~~~~-~~d~vpVDdva~aii~a~~~~~~~~ 323 (519)
..+++++++||+.|||+...+.... ......++..+..|....++++++. .++++||+|+|++++.++....
T Consensus 156 ~~~g~~~~~lrp~~v~G~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~i~v~Dva~~~~~~~~~~~--- 229 (310)
T 1eq2_A 156 PEANSQIVGFRYFNVYGPREGHKGSM---ASVAFHLNTQLNNGESPKLFEGSENFKRDFVYVGDVADVNLWFLENGV--- 229 (310)
T ss_dssp GGCSSCEEEEEECEEESSSCGGGGGG---SCHHHHHHHHHHC-------------CBCEEEHHHHHHHHHHHHHHCC---
T ss_pred HHcCCCEEEEeCCcEECcCCCCCCcc---chHHHHHHHHHHcCCCcEEecCCCcceEccEEHHHHHHHHHHHHhcCC---
Confidence 3479999999999999876321100 1223345566667766666788888 9999999999999999987532
Q ss_pred CCCcEEEecCCCCCchhHHHHHHH
Q 010075 324 SDANIYHVGSSLRNPVTLGLQVAN 347 (519)
Q Consensus 324 ~~~~iyni~s~~~~~i~~~~~~~~ 347 (519)
+++||++++...++..+...+.
T Consensus 230 --~~~~~i~~~~~~s~~e~~~~i~ 251 (310)
T 1eq2_A 230 --SGIFNLGTGRAESFQAVADATL 251 (310)
T ss_dssp --CEEEEESCSCCBCHHHHHHHC-
T ss_pred --CCeEEEeCCCccCHHHHHHHHH
Confidence 5799999986666544444443
|
| >1udb_A Epimerase, UDP-galactose-4-epimerase; isomerase; HET: NAD UFG; 1.65A {Escherichia coli} SCOP: c.2.1.2 PDB: 1lrj_A* 1nai_A* 1uda_A* 1nah_A* 1xel_A* 1kvq_A* 1kvs_A* 1udc_A* 2udp_A* 1a9z_A* 1kvt_A* 1kvr_A* 1lrk_A* 1lrl_A* 1kvu_A* 1a9y_A* | Back alignment and structure |
|---|
Probab=99.95 E-value=1.8e-26 Score=234.60 Aligned_cols=257 Identities=19% Similarity=0.245 Sum_probs=173.0
Q ss_pred CEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCc-ccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEEe
Q 010075 13 KTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADI-DSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVP 91 (519)
Q Consensus 13 k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~-~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v~ 91 (519)
|+|||||||||||++++++|++.| .+|+++.|.... ....+++. +.. ..++.++.
T Consensus 1 m~vlVTGatG~iG~~l~~~L~~~G---~~V~~~~~~~~~~~~~~~~~~-------------~~~--------~~~~~~~~ 56 (338)
T 1udb_A 1 MRVLVTGGSGYIGSHTCVQLLQNG---HDVIILDNLCNSKRSVLPVIE-------------RLG--------GKHPTFVE 56 (338)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTT---CEEEEEECCSSCCTTHHHHHH-------------HHH--------TSCCEEEE
T ss_pred CEEEEECCCCHHHHHHHHHHHHCC---CEEEEEecCCCcchhHHHHHH-------------hhc--------CCcceEEE
Confidence 579999999999999999999998 678888775432 22222221 000 24678899
Q ss_pred ccCCCCCCCCChhhhHHHHhc--CccEEEEcCccCCcc---ccHHHHHHHhHHHHHHHHHHHHhccCCceEEEEecceee
Q 010075 92 GDISSEDLGLKDSNLKEELWN--ELDIMVNSAAITKFD---ERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAYVA 166 (519)
Q Consensus 92 gDl~~~~lgls~~~~~~~l~~--~vdiViH~Aa~v~f~---~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V~vSTa~v~ 166 (519)
+|+++ .+....+++ ++|+|||+||..... +.....+++|+.|+.+++++|++. ++++|||+||+.+|
T Consensus 57 ~Dl~~-------~~~~~~~~~~~~~D~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~iv~~SS~~~~ 128 (338)
T 1udb_A 57 GDIRN-------EALMTEILHDHAIDTVIHFAGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAA-NVKNFIFSSSATVY 128 (338)
T ss_dssp CCTTC-------HHHHHHHHHHTTCSEEEECCSCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHH-TCCEEEEEEEGGGG
T ss_pred ccCCC-------HHHHHHHhhccCCCEEEECCccCccccchhcHHHHHHHHHHHHHHHHHHHHhc-CCCeEEEEccHHHh
Confidence 99995 333334544 599999999976532 355678999999999999999885 78899999999999
Q ss_pred cCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcHHHHHHHHHHHHHHHh-
Q 010075 167 GERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLMQQS- 245 (519)
Q Consensus 167 ~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~Y~~sK~~aE~lv~~~- 245 (519)
+...+ .++.|+.+. .++.+.|+.||+.+|++++.+
T Consensus 129 g~~~~----~~~~e~~~~----------------------------------------~~~~~~Y~~sK~~~e~~~~~~~ 164 (338)
T 1udb_A 129 GDNPK----IPYVESFPT----------------------------------------GTPQSPYGKSKLMVEQILTDLQ 164 (338)
T ss_dssp CSCCS----SSBCTTSCC----------------------------------------CCCSSHHHHHHHHHHHHHHHHH
T ss_pred CCCCC----CCcCcccCC----------------------------------------CCCCChHHHHHHHHHHHHHHHH
Confidence 75421 122221111 022578999999999999876
Q ss_pred -hc-CCcEEEEecCccccCCCCCCCccccc--ccccHHHHHHhhc--CCceeecc------CCCceeeeeeHHHHHHHHH
Q 010075 246 -KE-NLSLVIIRPTVVSGTYKEPFPGWVED--LKTINTLFVASAQ--GNLRCLVG------ETKVIMDVIPVDMVVNAMI 313 (519)
Q Consensus 246 -~~-~lp~~IvRPs~V~g~~~~p~~gw~~~--~~~~~~~i~~~~~--g~~~~~~~------~~~~~~d~vpVDdva~aii 313 (519)
.. +++++++||+.|||+......|.... .......+..... +....+.+ ++++.+|+|||+|+|++++
T Consensus 165 ~~~~~~~~~ilR~~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~i~v~Dva~a~~ 244 (338)
T 1udb_A 165 KAQPDWSIALLRYFNPVGAHPSGDMGEDPQGIPNNLMPYIAQVAVGRRDSLAIFGNDYPTEDGTGVRDYIHVMDLADGHV 244 (338)
T ss_dssp HHSTTCEEEEEEECEEECCCTTSSSCCCCCSSCCSHHHHHHHHHHTSSSCEEEECSCSSSSSSSCEECEEEHHHHHHHHH
T ss_pred HhcCCCceEEEeeceecCCCcccccccccccchhhHHHHHHHHHHhcCCCcEEecCcccCCCCceeeeeEEHHHHHHHHH
Confidence 23 79999999999999854222221110 0112233333332 33223333 5678899999999999999
Q ss_pred HHHHHhccCCCCCcEEEecCCCCCchhHHHHHH
Q 010075 314 VAMVAHAKQPSDANIYHVGSSLRNPVTLGLQVA 346 (519)
Q Consensus 314 ~a~~~~~~~~~~~~iyni~s~~~~~i~~~~~~~ 346 (519)
.++....... .+++||++++...++..+...+
T Consensus 245 ~~l~~~~~~~-~~~~yni~~~~~~s~~e~~~~i 276 (338)
T 1udb_A 245 VAMEKLANKP-GVHIYNLGAGVGNSVLDVVNAF 276 (338)
T ss_dssp HHHHHHTTCC-EEEEEEESCSCCEEHHHHHHHH
T ss_pred HHHhhhhccC-CCcEEEecCCCceeHHHHHHHH
Confidence 9887532111 1379999998665544344333
|
| >2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A* | Back alignment and structure |
|---|
Probab=99.95 E-value=6e-27 Score=237.83 Aligned_cols=241 Identities=20% Similarity=0.259 Sum_probs=176.3
Q ss_pred chhhhcCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccC
Q 010075 5 SVVEFLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFIS 84 (519)
Q Consensus 5 ~i~~~~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~ 84 (519)
.-++.+++|+|||||||||||++|+++|++.| .+|+++.|....... . ... .
T Consensus 13 ~~~~~~~~~~vlVTGasG~iG~~l~~~L~~~g---~~V~~~~r~~~~~~~-------~----------------~~~--l 64 (330)
T 2pzm_A 13 GLVPRGSHMRILITGGAGCLGSNLIEHWLPQG---HEILVIDNFATGKRE-------V----------------LPP--V 64 (330)
T ss_dssp -CCSTTTCCEEEEETTTSHHHHHHHHHHGGGT---CEEEEEECCSSSCGG-------G----------------SCS--C
T ss_pred CCcccCCCCEEEEECCCCHHHHHHHHHHHHCC---CEEEEEECCCccchh-------h----------------hhc--c
Confidence 34577889999999999999999999999998 688999996543210 0 000 1
Q ss_pred CceEEEeccCCCCCCCCChhhhHHHHhc--CccEEEEcCccCCcc--ccHHHHHHHhHHHHHHHHHHHHhccCCceEEEE
Q 010075 85 EKITFVPGDISSEDLGLKDSNLKEELWN--ELDIMVNSAAITKFD--ERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHV 160 (519)
Q Consensus 85 ~~v~~v~gDl~~~~lgls~~~~~~~l~~--~vdiViH~Aa~v~f~--~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V~v 160 (519)
.++.++.+|+++ .+....+++ ++|+|||+||..... ++++ +++|+.|+.+++++|.+. ++++|||+
T Consensus 65 ~~v~~~~~Dl~d-------~~~~~~~~~~~~~D~vih~A~~~~~~~~~~~~--~~~N~~~~~~l~~a~~~~-~~~~iV~~ 134 (330)
T 2pzm_A 65 AGLSVIEGSVTD-------AGLLERAFDSFKPTHVVHSAAAYKDPDDWAED--AATNVQGSINVAKAASKA-GVKRLLNF 134 (330)
T ss_dssp TTEEEEECCTTC-------HHHHHHHHHHHCCSEEEECCCCCSCTTCHHHH--HHHHTHHHHHHHHHHHHH-TCSEEEEE
T ss_pred CCceEEEeeCCC-------HHHHHHHHhhcCCCEEEECCccCCCccccChh--HHHHHHHHHHHHHHHHHc-CCCEEEEe
Confidence 468899999995 343456777 899999999987542 3333 899999999999999986 78999999
Q ss_pred ecceeecCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcHHHHHHHHHHH
Q 010075 161 STAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEM 240 (519)
Q Consensus 161 STa~v~~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~Y~~sK~~aE~ 240 (519)
||.++++...+. +.+++|+. .+.+.|+.||+.+|+
T Consensus 135 SS~~~~~~~~~~--~~~~~E~~-------------------------------------------~~~~~Y~~sK~~~e~ 169 (330)
T 2pzm_A 135 QTALCYGRPATV--PIPIDSPT-------------------------------------------APFTSYGISKTAGEA 169 (330)
T ss_dssp EEGGGGCSCSSS--SBCTTCCC-------------------------------------------CCCSHHHHHHHHHHH
T ss_pred cCHHHhCCCccC--CCCcCCCC-------------------------------------------CCCChHHHHHHHHHH
Confidence 999998754310 11222111 245789999999999
Q ss_pred HHHHhhcCCcEEEEecCccccCCCCCCCcccccccccHHHHHHhhcCCceeeccCCCceeeeeeHHHHHH-HHHHHHHHh
Q 010075 241 LMQQSKENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVN-AMIVAMVAH 319 (519)
Q Consensus 241 lv~~~~~~lp~~IvRPs~V~g~~~~p~~gw~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~d~vpVDdva~-aii~a~~~~ 319 (519)
+++.+ +++.+++||+.+||+... . .....++..+..|. .+++++. ..++++++|+|+ +++.++...
T Consensus 170 ~~~~~--~~~~~~iR~~~v~gp~~~--~------~~~~~~~~~~~~~~--~~~~~~~-~~~~i~~~Dva~~a~~~~~~~~ 236 (330)
T 2pzm_A 170 FLMMS--DVPVVSLRLANVTGPRLA--I------GPIPTFYKRLKAGQ--KCFCSDT-VRDFLDMSDFLAIADLSLQEGR 236 (330)
T ss_dssp HHHTC--SSCEEEEEECEEECTTCC--S------SHHHHHHHHHHTTC--CCCEESC-EECEEEHHHHHHHHHHHTSTTC
T ss_pred HHHHc--CCCEEEEeeeeeECcCCC--C------CHHHHHHHHHHcCC--EEeCCCC-EecceeHHHHHHHHHHHHhhcC
Confidence 99986 899999999999998641 1 12233444455554 4456666 899999999999 998887531
Q ss_pred ccCCCCCcEEEecCCCCCchhHHHHHH
Q 010075 320 AKQPSDANIYHVGSSLRNPVTLGLQVA 346 (519)
Q Consensus 320 ~~~~~~~~iyni~s~~~~~i~~~~~~~ 346 (519)
. +++||++++...++..+...+
T Consensus 237 ----~-g~~~~v~~~~~~s~~e~~~~i 258 (330)
T 2pzm_A 237 ----P-TGVFNVSTGEGHSIKEVFDVV 258 (330)
T ss_dssp ----C-CEEEEESCSCCEEHHHHHHHH
T ss_pred ----C-CCEEEeCCCCCCCHHHHHHHH
Confidence 1 689999998665543344333
|
| >2z1m_A GDP-D-mannose dehydratase; short-chain dehydrogenase/reductase, lyase, structural genom NPPSFA; HET: NDP GDP; 2.00A {Aquifex aeolicus} PDB: 2z95_A* | Back alignment and structure |
|---|
Probab=99.95 E-value=1e-26 Score=236.42 Aligned_cols=252 Identities=16% Similarity=0.144 Sum_probs=179.8
Q ss_pred cCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 010075 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (519)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (519)
|++|+|||||||||||++|+++|++.| .+|+++.|+...... +++.+ + + ...++++
T Consensus 1 m~~~~vlVtGatG~iG~~l~~~L~~~G---~~V~~~~r~~~~~~~-~~~~~-~-------------~------~~~~~~~ 56 (345)
T 2z1m_A 1 MSGKRALITGIRGQDGAYLAKLLLEKG---YEVYGADRRSGEFAS-WRLKE-L-------------G------IENDVKI 56 (345)
T ss_dssp --CCEEEEETTTSHHHHHHHHHHHHTT---CEEEEECSCCSTTTT-HHHHH-T-------------T------CTTTEEE
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHCC---CEEEEEECCCccccc-ccHhh-c-------------c------ccCceeE
Confidence 357999999999999999999999988 688999998654321 22210 0 0 0246889
Q ss_pred EeccCCCCCCCCChhhhHHHHhc--CccEEEEcCccCCc---cccHHHHHHHhHHHHHHHHHHHHhccCC-ceEEEEecc
Q 010075 90 VPGDISSEDLGLKDSNLKEELWN--ELDIMVNSAAITKF---DERYDVAFGINTLGVIHLVNFAKKCVKL-KVFVHVSTA 163 (519)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~~--~vdiViH~Aa~v~f---~~~~~~~~~~Nv~gt~~ll~~a~~~~~l-~~~V~vSTa 163 (519)
+.+|+++ .+....+++ ++|+|||+||.... .++++..+++|+.|+.+++++|.++ +. ++|||+||.
T Consensus 57 ~~~Dl~d-------~~~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~-~~~~~iv~~SS~ 128 (345)
T 2z1m_A 57 IHMDLLE-------FSNIIRTIEKVQPDEVYNLAAQSFVGVSFEQPILTAEVDAIGVLRILEALRTV-KPDTKFYQASTS 128 (345)
T ss_dssp CCCCTTC-------HHHHHHHHHHHCCSEEEECCCCCCHHHHTTSHHHHHHHHTHHHHHHHHHHHHH-CTTCEEEEEEEG
T ss_pred EECCCCC-------HHHHHHHHHhcCCCEEEECCCCcchhhhhhCHHHHHHHHHHHHHHHHHHHHHh-CCCceEEEEech
Confidence 9999995 333345555 47999999998654 2567888999999999999999986 65 899999999
Q ss_pred eeecCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcHHHHHHHHHHHHHH
Q 010075 164 YVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLMQ 243 (519)
Q Consensus 164 ~v~~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~Y~~sK~~aE~lv~ 243 (519)
++||...+ .++.|+.+. .+.+.|+.||+.+|.+++
T Consensus 129 ~vyg~~~~----~~~~e~~~~-----------------------------------------~~~~~Y~~sK~~~e~~~~ 163 (345)
T 2z1m_A 129 EMFGKVQE----IPQTEKTPF-----------------------------------------YPRSPYAVAKLFGHWITV 163 (345)
T ss_dssp GGGCSCSS----SSBCTTSCC-----------------------------------------CCCSHHHHHHHHHHHHHH
T ss_pred hhcCCCCC----CCCCccCCC-----------------------------------------CCCChhHHHHHHHHHHHH
Confidence 99986532 122222211 346789999999999998
Q ss_pred Hh--hcCCcEEEEecCccccCCCCCCCcccccccccHHHHHHhhcCCc-eeeccCCCceeeeeeHHHHHHHHHHHHHHhc
Q 010075 244 QS--KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNL-RCLVGETKVIMDVIPVDMVVNAMIVAMVAHA 320 (519)
Q Consensus 244 ~~--~~~lp~~IvRPs~V~g~~~~p~~gw~~~~~~~~~~i~~~~~g~~-~~~~~~~~~~~d~vpVDdva~aii~a~~~~~ 320 (519)
.+ ..++++++.|++.++|+...+ .+.. .....++..+..|.. ....+++...+++++++|+|++++.++....
T Consensus 164 ~~~~~~~~~~~~~r~~~~~gpg~~~--~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~Dva~a~~~~~~~~~ 239 (345)
T 2z1m_A 164 NYREAYNMFACSGILFNHESPLRGI--EFVT--RKITYSLARIKYGLQDKLVLGNLNAKRDWGYAPEYVEAMWLMMQQPE 239 (345)
T ss_dssp HHHHHHCCCEEEEEECCEECTTSCT--TSHH--HHHHHHHHHHHTTSCSCEEESCTTCEECCEEHHHHHHHHHHHHTSSS
T ss_pred HHHHHhCCceEeeeeeeecCCCCCC--cchh--HHHHHHHHHHHcCCCCeeeeCCCCceeeeEEHHHHHHHHHHHHhCCC
Confidence 77 347999999999999986421 1110 112223444445543 3356788889999999999999999885321
Q ss_pred cCCCCCcEEEecCCCCCchhHHHHHHH
Q 010075 321 KQPSDANIYHVGSSLRNPVTLGLQVAN 347 (519)
Q Consensus 321 ~~~~~~~iyni~s~~~~~i~~~~~~~~ 347 (519)
.++||++++...++..+...+.
T Consensus 240 -----~~~~~i~~~~~~s~~e~~~~i~ 261 (345)
T 2z1m_A 240 -----PDDYVIATGETHTVREFVEKAA 261 (345)
T ss_dssp -----CCCEEECCSCCEEHHHHHHHHH
T ss_pred -----CceEEEeCCCCccHHHHHHHHH
Confidence 3689999986666544444443
|
| >3ajr_A NDP-sugar epimerase; L-threonine dehydrogenase, L-3- hydroxynorvaline, oxidoreductase; HET: NAD; 1.77A {Thermoplasma volcanium} PDB: 3a9w_A* 3a4v_A* 3a1n_A* | Back alignment and structure |
|---|
Probab=99.95 E-value=7.3e-27 Score=235.21 Aligned_cols=230 Identities=18% Similarity=0.168 Sum_probs=167.5
Q ss_pred EEEEeCCccHHHHHHHHHHHHh--CCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEEe
Q 010075 14 TILVSGVTGFVAKVFIEKILRV--QPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVP 91 (519)
Q Consensus 14 ~VlITGaTGFlG~~Lv~~LL~~--g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v~ 91 (519)
+|||||||||||++|+++|++. + .+|+++.|+.... .++.++.
T Consensus 1 ~vlVtGatG~iG~~l~~~L~~~~~g---~~V~~~~r~~~~~--------------------------------~~~~~~~ 45 (317)
T 3ajr_A 1 MILVTGSSGQIGTELVPYLAEKYGK---KNVIASDIVQRDT--------------------------------GGIKFIT 45 (317)
T ss_dssp CEEEESTTSTTHHHHHHHHHHHHCG---GGEEEEESSCCCC--------------------------------TTCCEEE
T ss_pred CEEEEcCCcHHHHHHHHHHHHhcCC---CEEEEecCCCccc--------------------------------cCceEEE
Confidence 4899999999999999999998 5 5788888865321 1356889
Q ss_pred ccCCCCCCCCChhhhHHHHhc--CccEEEEcCccCCc--cccHHHHHHHhHHHHHHHHHHHHhccCCceEEEEecceeec
Q 010075 92 GDISSEDLGLKDSNLKEELWN--ELDIMVNSAAITKF--DERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAYVAG 167 (519)
Q Consensus 92 gDl~~~~lgls~~~~~~~l~~--~vdiViH~Aa~v~f--~~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V~vSTa~v~~ 167 (519)
+|+++ .+....+++ ++|+|||+||.... .++....+++|+.|+.+++++|++. ++++|||+||..+++
T Consensus 46 ~D~~d-------~~~~~~~~~~~~~d~vih~a~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~-~~~~~v~~SS~~~~~ 117 (317)
T 3ajr_A 46 LDVSN-------RDEIDRAVEKYSIDAIFHLAGILSAKGEKDPALAYKVNMNGTYNILEAAKQH-RVEKVVIPSTIGVFG 117 (317)
T ss_dssp CCTTC-------HHHHHHHHHHTTCCEEEECCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHT-TCCEEEEEEEGGGCC
T ss_pred ecCCC-------HHHHHHHHhhcCCcEEEECCcccCCccccChHHHhhhhhHHHHHHHHHHHHc-CCCEEEEecCHHHhC
Confidence 99995 333445665 89999999997542 2467788999999999999999986 789999999999998
Q ss_pred CcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcHHHHHHHHHHHHHHHh--
Q 010075 168 ERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLMQQS-- 245 (519)
Q Consensus 168 ~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~Y~~sK~~aE~lv~~~-- 245 (519)
.... ..+.+|+.+ ..+.+.|+.||+.+|.+++.+
T Consensus 118 ~~~~---~~~~~e~~~-----------------------------------------~~p~~~Y~~sK~~~e~~~~~~~~ 153 (317)
T 3ajr_A 118 PETP---KNKVPSITI-----------------------------------------TRPRTMFGVTKIAAELLGQYYYE 153 (317)
T ss_dssp TTSC---SSSBCSSSC-----------------------------------------CCCCSHHHHHHHHHHHHHHHHHH
T ss_pred CCCC---CCCcccccc-----------------------------------------CCCCchHHHHHHHHHHHHHHHHH
Confidence 6421 011111111 145689999999999999876
Q ss_pred hcCCcEEEEecCccccCCCCCCCcccccccccHHHHHHhhcCCceeeccCCCceeeeeeHHHHHHHHHHHHHHhccCCCC
Q 010075 246 KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMIVAMVAHAKQPSD 325 (519)
Q Consensus 246 ~~~lp~~IvRPs~V~g~~~~p~~gw~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~d~vpVDdva~aii~a~~~~~~~~~~ 325 (519)
..+++++++||+.+||+...|..+..+ .....+.....+.....+++++..++++||+|+|++++.++.........
T Consensus 154 ~~~~~~~~lR~~~~~g~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~l~~~~~~~~~ 230 (317)
T 3ajr_A 154 KFGLDVRSLRYPGIISYKAEPTAGTTD---YAVEIFYYAVKREKYKCYLAPNRALPMMYMPDALKALVDLYEADRDKLVL 230 (317)
T ss_dssp HHCCEEEEEEECEEECSSSCCCSCSST---HHHHHHHHHHTTCCEEECSCTTCCEEEEEHHHHHHHHHHHHHCCGGGCSS
T ss_pred hcCCeEEEEecCcEeccCCCCCCcchh---HHHHHHHHHHhCCCceeecCccceeeeeEHHHHHHHHHHHHhCCcccccc
Confidence 458999999999999987644322211 12223333333333445677788999999999999999998753221112
Q ss_pred CcEEEecC
Q 010075 326 ANIYHVGS 333 (519)
Q Consensus 326 ~~iyni~s 333 (519)
+++||+++
T Consensus 231 g~~~~i~~ 238 (317)
T 3ajr_A 231 RNGYNVTA 238 (317)
T ss_dssp CSCEECCS
T ss_pred CceEecCC
Confidence 47999985
|
| >2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica} | Back alignment and structure |
|---|
Probab=99.95 E-value=1.3e-26 Score=235.66 Aligned_cols=237 Identities=22% Similarity=0.223 Sum_probs=169.7
Q ss_pred chhhhcCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccC
Q 010075 5 SVVEFLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFIS 84 (519)
Q Consensus 5 ~i~~~~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~ 84 (519)
+....+++|+|||||||||||++|+++|++.| .+|+++.|....... .+ .. .
T Consensus 14 ~~~~~~~~~~vlVTGatG~iG~~l~~~L~~~g---~~V~~~~r~~~~~~~--~l---------------------~~--~ 65 (333)
T 2q1w_A 14 LVPRGSHMKKVFITGICGQIGSHIAELLLERG---DKVVGIDNFATGRRE--HL---------------------KD--H 65 (333)
T ss_dssp -------CCEEEEETTTSHHHHHHHHHHHHTT---CEEEEEECCSSCCGG--GS---------------------CC--C
T ss_pred eeeecCCCCEEEEeCCccHHHHHHHHHHHHCC---CEEEEEECCCccchh--hH---------------------hh--c
Confidence 34566789999999999999999999999988 688999997543210 00 00 1
Q ss_pred CceEEEeccCCCCCCCCChhhhHHHHhcC--ccEEEEcCccCCcc--ccHHHHHHHhHHHHHHHHHHHHhccCCceEEEE
Q 010075 85 EKITFVPGDISSEDLGLKDSNLKEELWNE--LDIMVNSAAITKFD--ERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHV 160 (519)
Q Consensus 85 ~~v~~v~gDl~~~~lgls~~~~~~~l~~~--vdiViH~Aa~v~f~--~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V~v 160 (519)
.+++++.+|+++ .+....++++ +|+|||+||..... ++.+ +++|+.|+.+++++|.+. ++++|||+
T Consensus 66 ~~~~~~~~Dl~d-------~~~~~~~~~~~~~D~vih~A~~~~~~~~~~~~--~~~N~~~~~~l~~a~~~~-~~~~iV~~ 135 (333)
T 2q1w_A 66 PNLTFVEGSIAD-------HALVNQLIGDLQPDAVVHTAASYKDPDDWYND--TLTNCVGGSNVVQAAKKN-NVGRFVYF 135 (333)
T ss_dssp TTEEEEECCTTC-------HHHHHHHHHHHCCSEEEECCCCCSCTTCHHHH--HHHHTHHHHHHHHHHHHT-TCSEEEEE
T ss_pred CCceEEEEeCCC-------HHHHHHHHhccCCcEEEECceecCCCccCChH--HHHHHHHHHHHHHHHHHh-CCCEEEEE
Confidence 478899999995 3334466666 99999999987542 2233 899999999999999985 78999999
Q ss_pred ecceeec----CcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCC-cHHHHHH
Q 010075 161 STAYVAG----ERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWP-NTYVFTK 235 (519)
Q Consensus 161 STa~v~~----~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~-n~Y~~sK 235 (519)
||.++|+ ...+ +++|+. .+. +.|+.||
T Consensus 136 SS~~~~g~~~~~~~~-----~~~E~~-------------------------------------------~p~~~~Y~~sK 167 (333)
T 2q1w_A 136 QTALCYGVKPIQQPV-----RLDHPR-------------------------------------------NPANSSYAISK 167 (333)
T ss_dssp EEGGGGCSCCCSSSB-----CTTSCC-------------------------------------------CCTTCHHHHHH
T ss_pred CcHHHhCCCcccCCC-----CcCCCC-------------------------------------------CCCCCchHHHH
Confidence 9999987 3221 222111 123 7899999
Q ss_pred HHHHHHHHH-hhcCCcEEEEecCccccCCCCCCCcccccccccHHHHHHhhcCCceeeccCCCceeeeeeHHHHHHHHHH
Q 010075 236 TMGEMLMQQ-SKENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMIV 314 (519)
Q Consensus 236 ~~aE~lv~~-~~~~lp~~IvRPs~V~g~~~~p~~gw~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~d~vpVDdva~aii~ 314 (519)
+.+|++++. +. +++++||+.+||+... . .....++..+..|. .+++ ++...++++++|+|++++.
T Consensus 168 ~~~E~~~~~s~~---~~~ilR~~~v~gp~~~--~------~~~~~~~~~~~~~~--~~~~-~~~~~~~i~v~Dva~ai~~ 233 (333)
T 2q1w_A 168 SANEDYLEYSGL---DFVTFRLANVVGPRNV--S------GPLPIFFQRLSEGK--KCFV-TKARRDFVFVKDLARATVR 233 (333)
T ss_dssp HHHHHHHHHHTC---CEEEEEESEEESTTCC--S------SHHHHHHHHHHTTC--CCEE-EECEECEEEHHHHHHHHHH
T ss_pred HHHHHHHHhhhC---CeEEEeeceEECcCCc--C------cHHHHHHHHHHcCC--eeeC-CCceEeeEEHHHHHHHHHH
Confidence 999999998 65 8999999999998731 1 12233445555565 3445 6778999999999999999
Q ss_pred HHHHhccCCCCCcEEEecCCCCCchhHHHHHH
Q 010075 315 AMVAHAKQPSDANIYHVGSSLRNPVTLGLQVA 346 (519)
Q Consensus 315 a~~~~~~~~~~~~iyni~s~~~~~i~~~~~~~ 346 (519)
++.... +++||++++...++..+...+
T Consensus 234 ~~~~~~-----g~~~~v~~~~~~s~~e~~~~i 260 (333)
T 2q1w_A 234 AVDGVG-----HGAYHFSSGTDVAIKELYDAV 260 (333)
T ss_dssp HHTTCC-----CEEEECSCSCCEEHHHHHHHH
T ss_pred HHhcCC-----CCEEEeCCCCCccHHHHHHHH
Confidence 885321 579999998665544444444
|
| >3sc6_A DTDP-4-dehydrorhamnose reductase; RFBD, structural genomics, infectious diseases, bacillus anthracis STR. AMES, rhamnose biosynthetic pathway; HET: NAP; 2.65A {Bacillus anthracis} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.95 E-value=8e-27 Score=231.71 Aligned_cols=217 Identities=19% Similarity=0.220 Sum_probs=166.0
Q ss_pred CEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEEec
Q 010075 13 KTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVPG 92 (519)
Q Consensus 13 k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v~g 92 (519)
|+|||||||||||+++++.|++.| .+|+++.|. .+
T Consensus 6 m~ilVtGatG~iG~~l~~~L~~~g---~~V~~~~r~------------------------------------------~~ 40 (287)
T 3sc6_A 6 ERVIITGANGQLGKQLQEELNPEE---YDIYPFDKK------------------------------------------LL 40 (287)
T ss_dssp EEEEEESTTSHHHHHHHHHSCTTT---EEEEEECTT------------------------------------------TS
T ss_pred eEEEEECCCCHHHHHHHHHHHhCC---CEEEEeccc------------------------------------------cc
Confidence 489999999999999999999988 688998872 36
Q ss_pred cCCCCCCCCChhhhHHHHhc--CccEEEEcCccCCcc---ccHHHHHHHhHHHHHHHHHHHHhccCCceEEEEecceeec
Q 010075 93 DISSEDLGLKDSNLKEELWN--ELDIMVNSAAITKFD---ERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAYVAG 167 (519)
Q Consensus 93 Dl~~~~lgls~~~~~~~l~~--~vdiViH~Aa~v~f~---~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V~vSTa~v~~ 167 (519)
|+++ .+....+++ ++|+|||+||..... ++....+++|+.|+.+++++|++. +. +|||+||.++|+
T Consensus 41 D~~d-------~~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~-~~v~~SS~~vy~ 111 (287)
T 3sc6_A 41 DITN-------ISQVQQVVQEIRPHIIIHCAAYTKVDQAEKERDLAYVINAIGARNVAVASQLV-GA-KLVYISTDYVFQ 111 (287)
T ss_dssp CTTC-------HHHHHHHHHHHCCSEEEECCCCCCHHHHTTCHHHHHHHHTHHHHHHHHHHHHH-TC-EEEEEEEGGGSC
T ss_pred CCCC-------HHHHHHHHHhcCCCEEEECCcccChHHHhcCHHHHHHHHHHHHHHHHHHHHHc-CC-eEEEEchhhhcC
Confidence 7774 333445555 699999999987653 478889999999999999999987 55 699999999998
Q ss_pred CcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcHHHHHHHHHHHHHHHhhc
Q 010075 168 ERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLMQQSKE 247 (519)
Q Consensus 168 ~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~Y~~sK~~aE~lv~~~~~ 247 (519)
...+ .+++|+.+. .+.+.|+.+|+.+|++++.+..
T Consensus 112 ~~~~----~~~~E~~~~-----------------------------------------~p~~~Y~~sK~~~E~~~~~~~~ 146 (287)
T 3sc6_A 112 GDRP----EGYDEFHNP-----------------------------------------APINIYGASKYAGEQFVKELHN 146 (287)
T ss_dssp CCCS----SCBCTTSCC-----------------------------------------CCCSHHHHHHHHHHHHHHHHCS
T ss_pred CCCC----CCCCCCCCC-----------------------------------------CCCCHHHHHHHHHHHHHHHhCC
Confidence 6532 233332222 4568999999999999998643
Q ss_pred CCcEEEEecCccccCCCCCCCcccccccccHHHHHHhhcCCceeeccCCCceeeeeeHHHHHHHHHHHHHHhccCCCCCc
Q 010075 248 NLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMIVAMVAHAKQPSDAN 327 (519)
Q Consensus 248 ~lp~~IvRPs~V~g~~~~p~~gw~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~d~vpVDdva~aii~a~~~~~~~~~~~~ 327 (519)
+++++||+.|||+... .....++..+..|....+.++ ..++++|++|+|++++.++.... ++
T Consensus 147 --~~~ilR~~~v~G~~~~---------~~~~~~~~~~~~~~~~~~~~~--~~~~~i~v~Dva~~~~~~~~~~~-----~~ 208 (287)
T 3sc6_A 147 --KYFIVRTSWLYGKYGN---------NFVKTMIRLGKEREEISVVAD--QIGSPTYVADLNVMINKLIHTSL-----YG 208 (287)
T ss_dssp --SEEEEEECSEECSSSC---------CHHHHHHHHHTTCSEEEEECS--CEECCEEHHHHHHHHHHHHTSCC-----CE
T ss_pred --CcEEEeeeeecCCCCC---------cHHHHHHHHHHcCCCeEeecC--cccCceEHHHHHHHHHHHHhCCC-----CC
Confidence 7899999999998652 123345555666666666554 78999999999999999986322 46
Q ss_pred EEEecCCCCCchhHHHHHH
Q 010075 328 IYHVGSSLRNPVTLGLQVA 346 (519)
Q Consensus 328 iyni~s~~~~~i~~~~~~~ 346 (519)
+||++++...++..+...+
T Consensus 209 ~~~i~~~~~~s~~e~~~~i 227 (287)
T 3sc6_A 209 TYHVSNTGSCSWFEFAKKI 227 (287)
T ss_dssp EEECCCBSCEEHHHHHHHH
T ss_pred eEEEcCCCcccHHHHHHHH
Confidence 9999998655544344443
|
| >3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=99.95 E-value=8.2e-27 Score=223.58 Aligned_cols=218 Identities=17% Similarity=0.144 Sum_probs=160.7
Q ss_pred CEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEEec
Q 010075 13 KTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVPG 92 (519)
Q Consensus 13 k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v~g 92 (519)
|+|||||||||||++++++|++.| .+|+++.|+..... ....++.++.+
T Consensus 5 ~~ilItGatG~iG~~l~~~L~~~g---~~V~~~~r~~~~~~----------------------------~~~~~~~~~~~ 53 (227)
T 3dhn_A 5 KKIVLIGASGFVGSALLNEALNRG---FEVTAVVRHPEKIK----------------------------IENEHLKVKKA 53 (227)
T ss_dssp CEEEEETCCHHHHHHHHHHHHTTT---CEEEEECSCGGGCC----------------------------CCCTTEEEECC
T ss_pred CEEEEEcCCchHHHHHHHHHHHCC---CEEEEEEcCcccch----------------------------hccCceEEEEe
Confidence 789999999999999999999988 68999999854321 01267899999
Q ss_pred cCCCCCCCCChhhhHHHHhcCccEEEEcCccCCccccHHHHHHHhHHHHHHHHHHHHhccCCceEEEEecceeecCcCCe
Q 010075 93 DISSEDLGLKDSNLKEELWNELDIMVNSAAITKFDERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAYVAGERTGL 172 (519)
Q Consensus 93 Dl~~~~lgls~~~~~~~l~~~vdiViH~Aa~v~f~~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V~vSTa~v~~~~~~~ 172 (519)
|+++ .+....+++++|+|||+|+.... ....+++|+.++.+++++|++. ++++|||+||..++....+.
T Consensus 54 Dl~d-------~~~~~~~~~~~d~vi~~a~~~~~---~~~~~~~n~~~~~~l~~~~~~~-~~~~~v~~Ss~~~~~~~~~~ 122 (227)
T 3dhn_A 54 DVSS-------LDEVCEVCKGADAVISAFNPGWN---NPDIYDETIKVYLTIIDGVKKA-GVNRFLMVGGAGSLFIAPGL 122 (227)
T ss_dssp CTTC-------HHHHHHHHTTCSEEEECCCC---------CCSHHHHHHHHHHHHHHHT-TCSEEEEECCSTTSEEETTE
T ss_pred cCCC-------HHHHHHHhcCCCEEEEeCcCCCC---ChhHHHHHHHHHHHHHHHHHHh-CCCEEEEeCChhhccCCCCC
Confidence 9994 44455788899999999987522 1236888999999999999996 78999999999876544332
Q ss_pred eecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcHHHHHHHHHHHHHHHh--hcCCc
Q 010075 173 ILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLMQQS--KENLS 250 (519)
Q Consensus 173 i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~Y~~sK~~aE~lv~~~--~~~lp 250 (519)
..|. .+ ..+.+.|+.+|+.+|.+++.+ ..+++
T Consensus 123 ~~~~-----~~-----------------------------------------~~p~~~Y~~sK~~~e~~~~~~~~~~~~~ 156 (227)
T 3dhn_A 123 RLMD-----SG-----------------------------------------EVPENILPGVKALGEFYLNFLMKEKEID 156 (227)
T ss_dssp EGGG-----TT-----------------------------------------CSCGGGHHHHHHHHHHHHHTGGGCCSSE
T ss_pred cccc-----CC-----------------------------------------cchHHHHHHHHHHHHHHHHHHhhccCcc
Confidence 2221 01 134578999999999888876 46899
Q ss_pred EEEEecCccccCCCCCCCcccccccccHHHHHHhhcCCceeeccCCCceeeeeeHHHHHHHHHHHHHHhccCCCCCcEEE
Q 010075 251 LVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMIVAMVAHAKQPSDANIYH 330 (519)
Q Consensus 251 ~~IvRPs~V~g~~~~p~~gw~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~d~vpVDdva~aii~a~~~~~~~~~~~~iyn 330 (519)
++++||+.|||+...+ +... . .+......+++ .++|+++|+|++++.++.+... .+++||
T Consensus 157 ~~ilrp~~v~g~~~~~--~~~~-----------~-~~~~~~~~~~~---~~~i~~~Dva~ai~~~l~~~~~---~g~~~~ 216 (227)
T 3dhn_A 157 WVFFSPAADMRPGVRT--GRYR-----------L-GKDDMIVDIVG---NSHISVEDYAAAMIDELEHPKH---HQERFT 216 (227)
T ss_dssp EEEEECCSEEESCCCC--CCCE-----------E-ESSBCCCCTTS---CCEEEHHHHHHHHHHHHHSCCC---CSEEEE
T ss_pred EEEEeCCcccCCCccc--ccee-----------e-cCCCcccCCCC---CcEEeHHHHHHHHHHHHhCccc---cCcEEE
Confidence 9999999999986532 1110 0 11111222222 8999999999999999975432 378999
Q ss_pred ecCCCCCc
Q 010075 331 VGSSLRNP 338 (519)
Q Consensus 331 i~s~~~~~ 338 (519)
++++++.+
T Consensus 217 ~~~~~~~~ 224 (227)
T 3dhn_A 217 IGYLEHHH 224 (227)
T ss_dssp EECCSCCC
T ss_pred EEeehhcc
Confidence 99986543
|
| >2ydy_A Methionine adenosyltransferase 2 subunit beta; oxidoreductase; 2.25A {Homo sapiens} PDB: 2ydx_A | Back alignment and structure |
|---|
Probab=99.95 E-value=9.6e-27 Score=234.28 Aligned_cols=232 Identities=16% Similarity=0.095 Sum_probs=146.9
Q ss_pred CCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEEe
Q 010075 12 NKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVP 91 (519)
Q Consensus 12 ~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v~ 91 (519)
+|+|||||||||||++|+++|++.| .+|+++.|+... .+ ++.
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~~g---~~V~~~~r~~~~---------------------------------~~--~~~ 43 (315)
T 2ydy_A 2 NRRVLVTGATGLLGRAVHKEFQQNN---WHAVGCGFRRAR---------------------------------PK--FEQ 43 (315)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHTTT---CEEEEEC---------------------------------------------
T ss_pred CCeEEEECCCcHHHHHHHHHHHhCC---CeEEEEccCCCC---------------------------------CC--eEE
Confidence 5899999999999999999999988 688999986421 11 568
Q ss_pred ccCCCCCCCCChhhhHHHHhc--CccEEEEcCccCCc---cccHHHHHHHhHHHHHHHHHHHHhccCCceEEEEecceee
Q 010075 92 GDISSEDLGLKDSNLKEELWN--ELDIMVNSAAITKF---DERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAYVA 166 (519)
Q Consensus 92 gDl~~~~lgls~~~~~~~l~~--~vdiViH~Aa~v~f---~~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V~vSTa~v~ 166 (519)
+|++++ .+. ..+++ ++|+|||+||.... .++++..+++|+.|+.+++++|.+. +. +|||+||.++|
T Consensus 44 ~Dl~d~------~~~-~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~-~~-~~v~~SS~~v~ 114 (315)
T 2ydy_A 44 VNLLDS------NAV-HHIIHDFQPHVIVHCAAERRPDVVENQPDAASQLNVDASGNLAKEAAAV-GA-FLIYISSDYVF 114 (315)
T ss_dssp --------------C-HHHHHHHCCSEEEECC-------------------CHHHHHHHHHHHHH-TC-EEEEEEEGGGS
T ss_pred ecCCCH------HHH-HHHHHhhCCCEEEECCcccChhhhhcCHHHHHHHHHHHHHHHHHHHHHc-CC-eEEEEchHHHc
Confidence 899863 222 24444 59999999998654 3567778999999999999999986 55 89999999999
Q ss_pred cCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcHHHHHHHHHHHHHHHhh
Q 010075 167 GERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLMQQSK 246 (519)
Q Consensus 167 ~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~Y~~sK~~aE~lv~~~~ 246 (519)
+...+.++|. .+. .+.+.|+.||+.+|++++.+
T Consensus 115 ~~~~~~~~E~-----~~~-----------------------------------------~~~~~Y~~sK~~~e~~~~~~- 147 (315)
T 2ydy_A 115 DGTNPPYREE-----DIP-----------------------------------------APLNLYGKTKLDGEKAVLEN- 147 (315)
T ss_dssp CSSSCSBCTT-----SCC-----------------------------------------CCCSHHHHHHHHHHHHHHHH-
T ss_pred CCCCCCCCCC-----CCC-----------------------------------------CCcCHHHHHHHHHHHHHHHh-
Confidence 8633233332 221 34678999999999999986
Q ss_pred cCCcEEEEecCccccCCCCCCCcccccccccHHHHHHhh-cCCceeeccCCCceeeeeeHHHHHHHHHHHHHHhccCCCC
Q 010075 247 ENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASA-QGNLRCLVGETKVIMDVIPVDMVVNAMIVAMVAHAKQPSD 325 (519)
Q Consensus 247 ~~lp~~IvRPs~V~g~~~~p~~gw~~~~~~~~~~i~~~~-~g~~~~~~~~~~~~~d~vpVDdva~aii~a~~~~~~~~~~ 325 (519)
+++++++||+.|||+...+..+++ ..++.... .|....+. ++...++++++|+|++++.++.........
T Consensus 148 -~~~~~~lR~~~v~G~~~~~~~~~~------~~~~~~~~~~~~~~~~~--~~~~~~~i~v~Dva~a~~~~~~~~~~~~~~ 218 (315)
T 2ydy_A 148 -NLGAAVLRIPILYGEVEKLEESAV------TVMFDKVQFSNKSANMD--HWQQRFPTHVKDVATVCRQLAEKRMLDPSI 218 (315)
T ss_dssp -CTTCEEEEECSEECSCSSGGGSTT------GGGHHHHHCCSSCEEEE--CSSBBCCEEHHHHHHHHHHHHHHHHTCTTC
T ss_pred -CCCeEEEeeeeeeCCCCcccccHH------HHHHHHHHhcCCCeeec--cCceECcEEHHHHHHHHHHHHHhhccccCC
Confidence 567899999999998764221222 22333444 45443333 457889999999999999998754111123
Q ss_pred CcEEEecCCCCCchhHHHHHH
Q 010075 326 ANIYHVGSSLRNPVTLGLQVA 346 (519)
Q Consensus 326 ~~iyni~s~~~~~i~~~~~~~ 346 (519)
+++||++++...++..+...+
T Consensus 219 ~~~~~i~~~~~~s~~e~~~~i 239 (315)
T 2ydy_A 219 KGTFHWSGNEQMTKYEMACAI 239 (315)
T ss_dssp CEEEECCCSCCBCHHHHHHHH
T ss_pred CCeEEEcCCCcccHHHHHHHH
Confidence 689999998665544444443
|
| >1t2a_A GDP-mannose 4,6 dehydratase; structural genomics consortium, rossman-fold, short-chain dehydrogenase/reductase, SDR, structural genomics,lyase; HET: NDP GDP; 1.84A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.95 E-value=3e-26 Score=236.56 Aligned_cols=255 Identities=16% Similarity=0.154 Sum_probs=178.4
Q ss_pred CEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEEec
Q 010075 13 KTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVPG 92 (519)
Q Consensus 13 k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v~g 92 (519)
|+|||||||||||++|+++|++.| .+|+++.|+...... +++. .+ .+.+.. ....+++++.+
T Consensus 25 ~~vlVtGatG~iG~~l~~~L~~~g---~~V~~~~r~~~~~~~-~~~~-~l-----~~~~~~--------~~~~~~~~~~~ 86 (375)
T 1t2a_A 25 NVALITGITGQDGSYLAEFLLEKG---YEVHGIVRRSSSFNT-GRIE-HL-----YKNPQA--------HIEGNMKLHYG 86 (375)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTT---CEEEEEECCCSSCCC-TTTG-GG-----C-----------------CEEEEEC
T ss_pred cEEEEECCCchHHHHHHHHHHHCC---CEEEEEECCccccch-hhHH-HH-----hhhhcc--------ccCCCceEEEc
Confidence 589999999999999999999988 688999997643110 0010 00 000000 00246889999
Q ss_pred cCCCCCCCCChhhhHHHHhc--CccEEEEcCccCCcc---ccHHHHHHHhHHHHHHHHHHHHhccCC---ceEEEEecce
Q 010075 93 DISSEDLGLKDSNLKEELWN--ELDIMVNSAAITKFD---ERYDVAFGINTLGVIHLVNFAKKCVKL---KVFVHVSTAY 164 (519)
Q Consensus 93 Dl~~~~lgls~~~~~~~l~~--~vdiViH~Aa~v~f~---~~~~~~~~~Nv~gt~~ll~~a~~~~~l---~~~V~vSTa~ 164 (519)
|+++ .+....+++ ++|+|||+||..... ++.+..+++|+.|+.+++++|.+. ++ ++|||+||.+
T Consensus 87 Dl~d-------~~~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~N~~g~~~l~~a~~~~-~~~~~~~iv~~SS~~ 158 (375)
T 1t2a_A 87 DLTD-------STCLVKIINEVKPTEIYNLGAQSHVKISFDLAEYTADVDGVGTLRLLDAVKTC-GLINSVKFYQASTSE 158 (375)
T ss_dssp CTTC-------HHHHHHHHHHHCCSEEEECCSCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHT-TCTTTCEEEEEEEGG
T ss_pred cCCC-------HHHHHHHHHhcCCCEEEECCCcccccccccCHHHHHHHHHHHHHHHHHHHHHh-CCCccceEEEecchh
Confidence 9995 333345555 479999999987653 567788999999999999999986 55 7999999999
Q ss_pred eecCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcHHHHHHHHHHHHHHH
Q 010075 165 VAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLMQQ 244 (519)
Q Consensus 165 v~~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~Y~~sK~~aE~lv~~ 244 (519)
+|+...+ .+++|+.+. .+.+.|+.||+.+|.+++.
T Consensus 159 ~~~~~~~----~~~~E~~~~-----------------------------------------~~~~~Y~~sK~~~e~~~~~ 193 (375)
T 1t2a_A 159 LYGKVQE----IPQKETTPF-----------------------------------------YPRSPYGAAKLYAYWIVVN 193 (375)
T ss_dssp GTCSCSS----SSBCTTSCC-----------------------------------------CCCSHHHHHHHHHHHHHHH
T ss_pred hhCCCCC----CCCCccCCC-----------------------------------------CCCChhHHHHHHHHHHHHH
Confidence 9986432 122222221 3457899999999999987
Q ss_pred h--hcCCcEEEEecCccccCCCCCCCcccccccccHHHHHHhhcCCc-eeeccCCCceeeeeeHHHHHHHHHHHHHHhcc
Q 010075 245 S--KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNL-RCLVGETKVIMDVIPVDMVVNAMIVAMVAHAK 321 (519)
Q Consensus 245 ~--~~~lp~~IvRPs~V~g~~~~p~~gw~~~~~~~~~~i~~~~~g~~-~~~~~~~~~~~d~vpVDdva~aii~a~~~~~~ 321 (519)
+ ..+++++++||+.+||+...+ ++.. ..+..++..+..|.. ....++++..+++|||+|+|++++.++....
T Consensus 194 ~~~~~~~~~~i~r~~~~~gp~~~~--~~~~--~~~~~~~~~~~~g~~~~~~~g~~~~~~~~i~v~Dva~a~~~~~~~~~- 268 (375)
T 1t2a_A 194 FREAYNLFAVNGILFNHESPRRGA--NFVT--RKISRSVAKIYLGQLECFSLGNLDAKRDWGHAKDYVEAMWLMLQNDE- 268 (375)
T ss_dssp HHHHHCCEEEEEEECCEECTTSCT--TSHH--HHHHHHHHHHHHTSCSCEEESCTTCEECCEEHHHHHHHHHHHHHSSS-
T ss_pred HHHHhCCCEEEEecccccCCCCCC--Ccch--HHHHHHHHHHHcCCCceeEeCCCCceeeeEEHHHHHHHHHHHHhcCC-
Confidence 7 348999999999999986531 2221 112334444555643 3456888999999999999999999986421
Q ss_pred CCCCCcEEEecCCCCCchhHHHHHHH
Q 010075 322 QPSDANIYHVGSSLRNPVTLGLQVAN 347 (519)
Q Consensus 322 ~~~~~~iyni~s~~~~~i~~~~~~~~ 347 (519)
.++||++++...++..+...+.
T Consensus 269 ----~~~~ni~~~~~~s~~e~~~~i~ 290 (375)
T 1t2a_A 269 ----PEDFVIATGEVHSVREFVEKSF 290 (375)
T ss_dssp ----CCCEEECCSCCEEHHHHHHHHH
T ss_pred ----CceEEEeCCCcccHHHHHHHHH
Confidence 3689999986655444444443
|
| >1z45_A GAL10 bifunctional protein; epimerase, mutarotase, metabolism, isomerase; HET: GAL NAD GUD; 1.85A {Saccharomyces cerevisiae} SCOP: b.30.5.4 c.2.1.2 | Back alignment and structure |
|---|
Probab=99.95 E-value=7.4e-26 Score=252.61 Aligned_cols=269 Identities=17% Similarity=0.175 Sum_probs=180.9
Q ss_pred hhhhcCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCccc-HHHHHHHHHhhhhhHHHHHhhhccccccccC
Q 010075 6 VVEFLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDS-AALRFQNEVLAKDVFNVLKEKWGTRLNSFIS 84 (519)
Q Consensus 6 i~~~~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~-~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~ 84 (519)
+...+++|+|||||||||||++|+++|++.| .+|+++.|...... ..+++.. . ..
T Consensus 5 ~~~~~~~~~ilVTGatG~IG~~l~~~L~~~G---~~V~~~~r~~~~~~~~~~~l~~-------------~--------~~ 60 (699)
T 1z45_A 5 LQSESTSKIVLVTGGAGYIGSHTVVELIENG---YDCVVADNLSNSTYDSVARLEV-------------L--------TK 60 (699)
T ss_dssp ------CCEEEEETTTSHHHHHHHHHHHHTT---CEEEEEECCSSCCTHHHHHHHH-------------H--------HT
T ss_pred cccccCCCEEEEECCCCHHHHHHHHHHHHCc---CEEEEEECCCcchHHHHHHHhh-------------c--------cC
Confidence 3455778999999999999999999999988 68899998764332 1222210 0 02
Q ss_pred CceEEEeccCCCCCCCCChhhhHHHHhc--CccEEEEcCccCCcc---ccHHHHHHHhHHHHHHHHHHHHhccCCceEEE
Q 010075 85 EKITFVPGDISSEDLGLKDSNLKEELWN--ELDIMVNSAAITKFD---ERYDVAFGINTLGVIHLVNFAKKCVKLKVFVH 159 (519)
Q Consensus 85 ~~v~~v~gDl~~~~lgls~~~~~~~l~~--~vdiViH~Aa~v~f~---~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V~ 159 (519)
.++.++.+|+++ .+....+++ ++|+|||+||..... +.....+++|+.|+.+++++|++. ++++|||
T Consensus 61 ~~v~~v~~Dl~d-------~~~l~~~~~~~~~D~Vih~A~~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~-~~~~iV~ 132 (699)
T 1z45_A 61 HHIPFYEVDLCD-------RKGLEKVFKEYKIDSVIHFAGLKAVGESTQIPLRYYHNNILGTVVLLELMQQY-NVSKFVF 132 (699)
T ss_dssp SCCCEEECCTTC-------HHHHHHHHHHSCCCEEEECCSCCCHHHHHHSHHHHHHHHHHHHHHHHHHHHHH-TCCEEEE
T ss_pred CceEEEEcCCCC-------HHHHHHHHHhCCCCEEEECCcccCcCccccCHHHHHHHHHHHHHHHHHHHHHc-CCCEEEE
Confidence 568899999995 333445666 799999999987642 345677999999999999999986 7899999
Q ss_pred EecceeecCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcHHHHHHHHHH
Q 010075 160 VSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGE 239 (519)
Q Consensus 160 vSTa~v~~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~Y~~sK~~aE 239 (519)
+||+++|+.....-...+++|+.+ ..+.+.|+.||+.+|
T Consensus 133 ~SS~~vyg~~~~~~~~~~~~E~~~-----------------------------------------~~p~~~Y~~sK~~~E 171 (699)
T 1z45_A 133 SSSATVYGDATRFPNMIPIPEECP-----------------------------------------LGPTNPYGHTKYAIE 171 (699)
T ss_dssp EEEGGGGCCGGGSTTCCSBCTTSC-----------------------------------------CCCCSHHHHHHHHHH
T ss_pred ECcHHHhCCCccccccCCccccCC-----------------------------------------CCCCChHHHHHHHHH
Confidence 999999985421000011222111 134678999999999
Q ss_pred HHHHHh--h--cCCcEEEEecCccccCCCCCCCcccc--cccccHHHHHHhhcC--Cceeecc------CCCceeeeeeH
Q 010075 240 MLMQQS--K--ENLSLVIIRPTVVSGTYKEPFPGWVE--DLKTINTLFVASAQG--NLRCLVG------ETKVIMDVIPV 305 (519)
Q Consensus 240 ~lv~~~--~--~~lp~~IvRPs~V~g~~~~p~~gw~~--~~~~~~~~i~~~~~g--~~~~~~~------~~~~~~d~vpV 305 (519)
++++.+ . .+++++|+||+.|||+....+.|-.. ........+.....+ ....+++ +++..+++|||
T Consensus 172 ~~~~~~~~~~~~g~~~~ilR~~~vyG~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~i~v 251 (699)
T 1z45_A 172 NILNDLYNSDKKSWKFAILRYFNPIGAHPSGLIGEDPLGIPNNLLPYMAQVAVGRREKLYIFGDDYDSRDGTPIRDYIHV 251 (699)
T ss_dssp HHHHHHHHHSTTSCEEEEEEECEEECCCTTSSCCCCCSSSCCSHHHHHHHHHTTSSSCCCCC------CCSSCEECEEEH
T ss_pred HHHHHHHHhccCCCcEEEEEeccccCCCcccccccccccchhHHHHHHHHHHhcCCCceEEeCCcccCCCCCeeEeeEEH
Confidence 999876 2 68999999999999986422211100 001222334444333 2333444 67889999999
Q ss_pred HHHHHHHHHHHHHhcc---CCCCCcEEEecCCCCCchhHHHHHHH
Q 010075 306 DMVVNAMIVAMVAHAK---QPSDANIYHVGSSLRNPVTLGLQVAN 347 (519)
Q Consensus 306 Ddva~aii~a~~~~~~---~~~~~~iyni~s~~~~~i~~~~~~~~ 347 (519)
+|+|++++.++..... ....+++||++++...++..++..+.
T Consensus 252 ~Dva~a~~~a~~~~~~~~~~~~~~~~yni~~~~~~s~~el~~~i~ 296 (699)
T 1z45_A 252 VDLAKGHIAALQYLEAYNENEGLCREWNLGSGKGSTVFEVYHAFC 296 (699)
T ss_dssp HHHHHHHHHHHHHHHHSCTTCCEEEEEEESCSCCEEHHHHHHHHH
T ss_pred HHHHHHHHHHHhhhhccccccCCceEEEECCCCCCcHHHHHHHHH
Confidence 9999999999875321 11124799999987666554444443
|
| >1n2s_A DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold, sugar-nucleotide-binding domain; HET: NAD; 2.00A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1kc1_A* 1kc3_A* 1kbz_A* | Back alignment and structure |
|---|
Probab=99.95 E-value=2.1e-26 Score=229.90 Aligned_cols=225 Identities=20% Similarity=0.158 Sum_probs=167.2
Q ss_pred CEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEEec
Q 010075 13 KTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVPG 92 (519)
Q Consensus 13 k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v~g 92 (519)
|+|||||||||||++|+++|+ .| .+|+++.|+.. .+.+
T Consensus 1 m~ilVtGatG~iG~~l~~~L~-~g---~~V~~~~r~~~--------------------------------------~~~~ 38 (299)
T 1n2s_A 1 MNILLFGKTGQVGWELQRSLA-PV---GNLIALDVHSK--------------------------------------EFCG 38 (299)
T ss_dssp CEEEEECTTSHHHHHHHHHTT-TT---SEEEEECTTCS--------------------------------------SSCC
T ss_pred CeEEEECCCCHHHHHHHHHhh-cC---CeEEEeccccc--------------------------------------cccc
Confidence 579999999999999999999 77 68899988641 2478
Q ss_pred cCCCCCCCCChhhhHHHHhcC--ccEEEEcCccCCc---cccHHHHHHHhHHHHHHHHHHHHhccCCceEEEEecceeec
Q 010075 93 DISSEDLGLKDSNLKEELWNE--LDIMVNSAAITKF---DERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAYVAG 167 (519)
Q Consensus 93 Dl~~~~lgls~~~~~~~l~~~--vdiViH~Aa~v~f---~~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V~vSTa~v~~ 167 (519)
|+++ .+....++++ +|+|||+||.... .++.+..+++|+.|+.+++++|++. +. +|||+||.++|+
T Consensus 39 D~~d-------~~~~~~~~~~~~~d~vih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~-~~-~~v~~SS~~vy~ 109 (299)
T 1n2s_A 39 DFSN-------PKGVAETVRKLRPDVIVNAAAHTAVDKAESEPELAQLLNATSVEAIAKAANET-GA-WVVHYSTDYVFP 109 (299)
T ss_dssp CTTC-------HHHHHHHHHHHCCSEEEECCCCCCHHHHTTCHHHHHHHHTHHHHHHHHHHTTT-TC-EEEEEEEGGGSC
T ss_pred cCCC-------HHHHHHHHHhcCCCEEEECcccCCHhhhhcCHHHHHHHHHHHHHHHHHHHHHc-CC-cEEEEecccEEe
Confidence 9884 3333455554 9999999998764 3567888999999999999999986 55 799999999998
Q ss_pred CcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcHHHHHHHHHHHHHHHhhc
Q 010075 168 ERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLMQQSKE 247 (519)
Q Consensus 168 ~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~Y~~sK~~aE~lv~~~~~ 247 (519)
...+ .+++|+.+. .+.+.|+.+|+.+|++++.+.
T Consensus 110 ~~~~----~~~~E~~~~-----------------------------------------~p~~~Y~~sK~~~E~~~~~~~- 143 (299)
T 1n2s_A 110 GTGD----IPWQETDAT-----------------------------------------SPLNVYGKTKLAGEKALQDNC- 143 (299)
T ss_dssp CCTT----CCBCTTSCC-----------------------------------------CCSSHHHHHHHHHHHHHHHHC-
T ss_pred CCCC----CCCCCCCCC-----------------------------------------CCccHHHHHHHHHHHHHHHhC-
Confidence 6532 222222221 456799999999999999864
Q ss_pred CCcEEEEecCccccCCCCCCCcccccccccHHHHHHhhcCCceeeccCCCceeeeeeHHHHHHHHHHHHHHhccCCCCCc
Q 010075 248 NLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMIVAMVAHAKQPSDAN 327 (519)
Q Consensus 248 ~lp~~IvRPs~V~g~~~~p~~gw~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~d~vpVDdva~aii~a~~~~~~~~~~~~ 327 (519)
.+++++||+.|||+... + ....++..+..|....+.+ +...+++|++|+|++++.++.........++
T Consensus 144 -~~~~ilRp~~v~G~~~~---~------~~~~~~~~~~~~~~~~~~~--~~~~~~i~v~Dva~~~~~~~~~~~~~~~~~~ 211 (299)
T 1n2s_A 144 -PKHLIFRTSWVYAGKGN---N------FAKTMLRLAKERQTLSVIN--DQYGAPTGAELLADCTAHAIRVALNKPEVAG 211 (299)
T ss_dssp -SSEEEEEECSEECSSSC---C------HHHHHHHHHHHCSEEEEEC--SCEECCEEHHHHHHHHHHHHHHHHHCGGGCE
T ss_pred -CCeEEEeeeeecCCCcC---c------HHHHHHHHHhcCCCEEeec--CcccCCeeHHHHHHHHHHHHHHhccccccCc
Confidence 38999999999998652 1 2234555555666555554 3789999999999999999976421110157
Q ss_pred EEEecCCCCCchhHHHHHH
Q 010075 328 IYHVGSSLRNPVTLGLQVA 346 (519)
Q Consensus 328 iyni~s~~~~~i~~~~~~~ 346 (519)
+||++++...++..+...+
T Consensus 212 ~~~i~~~~~~s~~e~~~~i 230 (299)
T 1n2s_A 212 LYHLVAGGTTTWHDYAALV 230 (299)
T ss_dssp EEECCCBSCEEHHHHHHHH
T ss_pred eEEEeCCCCCCHHHHHHHH
Confidence 9999998665544444443
|
| >2hrz_A AGR_C_4963P, nucleoside-diphosphate-sugar epimerase; agrobacterium tumefa structural genomics, PSI-2, protein structure initiative; 1.85A {Agrobacterium tumefaciens} | Back alignment and structure |
|---|
Probab=99.95 E-value=4.1e-26 Score=232.34 Aligned_cols=256 Identities=16% Similarity=0.138 Sum_probs=180.2
Q ss_pred hcCCCEEEEeCCccHHHHHHHHHHHHhCCC----ccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccC
Q 010075 9 FLENKTILVSGVTGFVAKVFIEKILRVQPN----VKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFIS 84 (519)
Q Consensus 9 ~~~~k~VlITGaTGFlG~~Lv~~LL~~g~~----v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~ 84 (519)
++++|+|||||||||||++|+++|++.|.. +.+|+++.|....... ...
T Consensus 11 ~~~~~~vlVtGa~G~iG~~l~~~L~~~g~~~~r~~~~V~~~~r~~~~~~~---------------------------~~~ 63 (342)
T 2hrz_A 11 YFQGMHIAIIGAAGMVGRKLTQRLVKDGSLGGKPVEKFTLIDVFQPEAPA---------------------------GFS 63 (342)
T ss_dssp CCSCEEEEEETTTSHHHHHHHHHHHHHCEETTEEEEEEEEEESSCCCCCT---------------------------TCC
T ss_pred CccCCEEEEECCCcHHHHHHHHHHHhcCCcccCCCceEEEEEccCCcccc---------------------------ccC
Confidence 468899999999999999999999998721 1478999997543210 012
Q ss_pred CceEEEeccCCCCCCCCChhhhHHHHh-cCccEEEEcCccCCc--cccHHHHHHHhHHHHHHHHHHHHhcc----CCceE
Q 010075 85 EKITFVPGDISSEDLGLKDSNLKEELW-NELDIMVNSAAITKF--DERYDVAFGINTLGVIHLVNFAKKCV----KLKVF 157 (519)
Q Consensus 85 ~~v~~v~gDl~~~~lgls~~~~~~~l~-~~vdiViH~Aa~v~f--~~~~~~~~~~Nv~gt~~ll~~a~~~~----~l~~~ 157 (519)
.++.++.+|++++ +....++ .++|+|||+||.... .+++...+++|+.|+.+++++|++.. ++++|
T Consensus 64 ~~~~~~~~Dl~d~-------~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~nv~g~~~l~~~~~~~~~~~~~~~~i 136 (342)
T 2hrz_A 64 GAVDARAADLSAP-------GEAEKLVEARPDVIFHLAAIVSGEAELDFDKGYRINLDGTRYLFDAIRIANGKDGYKPRV 136 (342)
T ss_dssp SEEEEEECCTTST-------THHHHHHHTCCSEEEECCCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHHHHHHCCCCEE
T ss_pred CceeEEEcCCCCH-------HHHHHHHhcCCCEEEECCccCcccccccHHHHHHHHHHHHHHHHHHHHhcccccCCCcEE
Confidence 5788999999953 3334555 589999999997642 35678889999999999999998864 37899
Q ss_pred EEEecceeecCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcHHHHHHHH
Q 010075 158 VHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTM 237 (519)
Q Consensus 158 V~vSTa~v~~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~Y~~sK~~ 237 (519)
||+||..+|+.... .+++|+.+. .+.+.|+.||+.
T Consensus 137 v~~SS~~~~~~~~~----~~~~E~~~~-----------------------------------------~~~~~Y~~sK~~ 171 (342)
T 2hrz_A 137 VFTSSIAVFGAPLP----YPIPDEFHT-----------------------------------------TPLTSYGTQKAI 171 (342)
T ss_dssp EEEEEGGGCCSSCC----SSBCTTCCC-----------------------------------------CCSSHHHHHHHH
T ss_pred EEeCchHhhCCCCC----CCcCCCCCC-----------------------------------------CCcchHHHHHHH
Confidence 99999999986421 122222221 346789999999
Q ss_pred HHHHHHHh--hcCCcEEEEecCcccc-CCCCCCCcccccccccHHHHHHhhcCCceeeccCCCceeeeeeHHHHHHHHHH
Q 010075 238 GEMLMQQS--KENLSLVIIRPTVVSG-TYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMIV 314 (519)
Q Consensus 238 aE~lv~~~--~~~lp~~IvRPs~V~g-~~~~p~~gw~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~d~vpVDdva~aii~ 314 (519)
+|++++++ ..+++.+++|++.|+| +.. +... .......++.....|....++++++...++++++|+|++++.
T Consensus 172 ~e~~~~~~~~~~~~~~~~ir~~~v~g~pg~-~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~Dva~~~~~ 247 (342)
T 2hrz_A 172 CELLLSDYSRRGFFDGIGIRLPTICIRPGK-PNAA---ASGFFSNILREPLVGQEAVLPVPESIRHWHASPRSAVGFLIH 247 (342)
T ss_dssp HHHHHHHHHHTTSCEEEEEEECEETTCCSS-CCCS---GGGHHHHHHHHHHTTCCEEECSCTTCEEEEECHHHHHHHHHH
T ss_pred HHHHHHHHHHhcCCCceeEEeeeEEecCCC-Ccch---hHHHHHHHHHHHhcCCCeeccCCCccceeeEehHHHHHHHHH
Confidence 99999887 3468999999999998 432 1100 011233455566667666666677778889999999999999
Q ss_pred HHHHhccCCCCCcEEEecCCCCCchhHHHHHHHH
Q 010075 315 AMVAHAKQPSDANIYHVGSSLRNPVTLGLQVANT 348 (519)
Q Consensus 315 a~~~~~~~~~~~~iyni~s~~~~~i~~~~~~~~~ 348 (519)
++.........+++||++ +...++..+...+..
T Consensus 248 ~~~~~~~~~~~~~~~ni~-g~~~s~~e~~~~i~~ 280 (342)
T 2hrz_A 248 GAMIDVEKVGPRRNLSMP-GLSATVGEQIEALRK 280 (342)
T ss_dssp HHHSCHHHHCSCCEEECC-CEEEEHHHHHHHHHH
T ss_pred HHhccccccCCccEEEcC-CCCCCHHHHHHHHHH
Confidence 986432100125799995 433343334444433
|
| >3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3} | Back alignment and structure |
|---|
Probab=99.95 E-value=4.1e-26 Score=226.46 Aligned_cols=217 Identities=17% Similarity=0.159 Sum_probs=163.9
Q ss_pred CEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEEec
Q 010075 13 KTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVPG 92 (519)
Q Consensus 13 k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v~g 92 (519)
|+|||||| ||||++|++.|++.| .+|++++|+.... +.+. ..+++++.+
T Consensus 6 ~~ilVtGa-G~iG~~l~~~L~~~g---~~V~~~~r~~~~~---~~~~------------------------~~~~~~~~~ 54 (286)
T 3ius_A 6 GTLLSFGH-GYTARVLSRALAPQG---WRIIGTSRNPDQM---EAIR------------------------ASGAEPLLW 54 (286)
T ss_dssp CEEEEETC-CHHHHHHHHHHGGGT---CEEEEEESCGGGH---HHHH------------------------HTTEEEEES
T ss_pred CcEEEECC-cHHHHHHHHHHHHCC---CEEEEEEcChhhh---hhHh------------------------hCCCeEEEe
Confidence 78999998 999999999999998 6889999976432 1111 157899999
Q ss_pred cCCCCCCCCChhhhHHHHhcCccEEEEcCccCCccccHHHHHHHhHHHHHHHHHHHHhc-cCCceEEEEecceeecCcCC
Q 010075 93 DISSEDLGLKDSNLKEELWNELDIMVNSAAITKFDERYDVAFGINTLGVIHLVNFAKKC-VKLKVFVHVSTAYVAGERTG 171 (519)
Q Consensus 93 Dl~~~~lgls~~~~~~~l~~~vdiViH~Aa~v~f~~~~~~~~~~Nv~gt~~ll~~a~~~-~~l~~~V~vSTa~v~~~~~~ 171 (519)
|+++. + ..++|+|||+|+.....++ .+.+++++|++. .++++|||+||+++|+...+
T Consensus 55 D~~d~-------~-----~~~~d~vi~~a~~~~~~~~----------~~~~l~~a~~~~~~~~~~~v~~Ss~~vyg~~~~ 112 (286)
T 3ius_A 55 PGEEP-------S-----LDGVTHLLISTAPDSGGDP----------VLAALGDQIAARAAQFRWVGYLSTTAVYGDHDG 112 (286)
T ss_dssp SSSCC-------C-----CTTCCEEEECCCCBTTBCH----------HHHHHHHHHHHTGGGCSEEEEEEEGGGGCCCTT
T ss_pred ccccc-------c-----cCCCCEEEECCCccccccH----------HHHHHHHHHHhhcCCceEEEEeecceecCCCCC
Confidence 99962 1 4689999999998765432 256888988874 47899999999999987543
Q ss_pred -eeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcHHHHHHHHHHHHHHHhhcCCc
Q 010075 172 -LILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLMQQSKENLS 250 (519)
Q Consensus 172 -~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~Y~~sK~~aE~lv~~~~~~lp 250 (519)
.++|. .+. .+.+.|+.+|+.+|++++++ .+++
T Consensus 113 ~~~~E~-----~~~-----------------------------------------~p~~~Y~~sK~~~E~~~~~~-~~~~ 145 (286)
T 3ius_A 113 AWVDET-----TPL-----------------------------------------TPTAARGRWRVMAEQQWQAV-PNLP 145 (286)
T ss_dssp CEECTT-----SCC-----------------------------------------CCCSHHHHHHHHHHHHHHHS-TTCC
T ss_pred CCcCCC-----CCC-----------------------------------------CCCCHHHHHHHHHHHHHHhh-cCCC
Confidence 33333 221 45688999999999999997 7899
Q ss_pred EEEEecCccccCCCCCCCcccccccccHHHHHHhhcCCceeeccCCCceeeeeeHHHHHHHHHHHHHHhccCCCCCcEEE
Q 010075 251 LVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMIVAMVAHAKQPSDANIYH 330 (519)
Q Consensus 251 ~~IvRPs~V~g~~~~p~~gw~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~d~vpVDdva~aii~a~~~~~~~~~~~~iyn 330 (519)
++|+||+.|||+...++. .+..|....+.++ ...+++||++|+|++++.++.... .+++||
T Consensus 146 ~~ilRp~~v~G~~~~~~~--------------~~~~~~~~~~~~~-~~~~~~i~v~Dva~a~~~~~~~~~----~g~~~~ 206 (286)
T 3ius_A 146 LHVFRLAGIYGPGRGPFS--------------KLGKGGIRRIIKP-GQVFSRIHVEDIAQVLAASMARPD----PGAVYN 206 (286)
T ss_dssp EEEEEECEEEBTTBSSST--------------TSSSSCCCEEECT-TCCBCEEEHHHHHHHHHHHHHSCC----TTCEEE
T ss_pred EEEEeccceECCCchHHH--------------HHhcCCccccCCC-CcccceEEHHHHHHHHHHHHhCCC----CCCEEE
Confidence 999999999998764421 1234554455444 578999999999999999997433 257999
Q ss_pred ecCCCCCchhHHHHHHHH
Q 010075 331 VGSSLRNPVTLGLQVANT 348 (519)
Q Consensus 331 i~s~~~~~i~~~~~~~~~ 348 (519)
++++...++..+...+..
T Consensus 207 i~~~~~~s~~e~~~~i~~ 224 (286)
T 3ius_A 207 VCDDEPVPPQDVIAYAAE 224 (286)
T ss_dssp ECCSCCBCHHHHHHHHHH
T ss_pred EeCCCCccHHHHHHHHHH
Confidence 999876665445544433
|
| >1db3_A GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lyase; 2.30A {Escherichia coli} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.95 E-value=3.1e-26 Score=235.80 Aligned_cols=254 Identities=15% Similarity=0.132 Sum_probs=175.7
Q ss_pred CCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEEe
Q 010075 12 NKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVP 91 (519)
Q Consensus 12 ~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v~ 91 (519)
+|+|||||||||||++++++|++.| .+|+++.|+..... .+++. .+ .++.. ....++.++.
T Consensus 1 m~~vlVtGatG~iG~~l~~~L~~~g---~~V~~~~r~~~~~~-~~~~~-~~---------~~~~~-----~~~~~~~~~~ 61 (372)
T 1db3_A 1 SKVALITGVTGQDGSYLAEFLLEKG---YEVHGIKRRASSFN-TERVD-HI---------YQDPH-----TCNPKFHLHY 61 (372)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTT---CEEEEECC-------------------------------------CCEEECC
T ss_pred CCEEEEECCCChHHHHHHHHHHHCC---CEEEEEECCCcccc-hHHHH-HH---------hhccc-----cCCCceEEEE
Confidence 4789999999999999999999988 68899999754311 11111 00 00000 0025788999
Q ss_pred ccCCCCCCCCChhhhHHHHhc--CccEEEEcCccCCcc---ccHHHHHHHhHHHHHHHHHHHHhccCC---ceEEEEecc
Q 010075 92 GDISSEDLGLKDSNLKEELWN--ELDIMVNSAAITKFD---ERYDVAFGINTLGVIHLVNFAKKCVKL---KVFVHVSTA 163 (519)
Q Consensus 92 gDl~~~~lgls~~~~~~~l~~--~vdiViH~Aa~v~f~---~~~~~~~~~Nv~gt~~ll~~a~~~~~l---~~~V~vSTa 163 (519)
+|+++ .+....+++ ++|+|||+||..... ++....+++|+.|+.+++++|++. ++ ++|||+||.
T Consensus 62 ~Dl~d-------~~~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~~~~iv~~SS~ 133 (372)
T 1db3_A 62 GDLSD-------TSNLTRILREVQPDEVYNLGAMSHVAVSFESPEYTADVDAMGTLRLLEAIRFL-GLEKKTRFYQASTS 133 (372)
T ss_dssp CCSSC-------HHHHHHHHHHHCCSEEEECCCCCTTTTTTSCHHHHHHHHTHHHHHHHHHHHHT-TCTTTCEEEEEEEG
T ss_pred CCCCC-------HHHHHHHHHhcCCCEEEECCcccCccccccCHHHHHHHHHHHHHHHHHHHHHh-CCCCCcEEEEeCCh
Confidence 99995 333345555 479999999986532 467788999999999999999986 56 799999999
Q ss_pred eeecCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcHHHHHHHHHHHHHH
Q 010075 164 YVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLMQ 243 (519)
Q Consensus 164 ~v~~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~Y~~sK~~aE~lv~ 243 (519)
.+|+...+ .+++|+.+. .+.+.|+.||+.+|.+++
T Consensus 134 ~v~g~~~~----~~~~E~~~~-----------------------------------------~~~~~Y~~sK~~~e~~~~ 168 (372)
T 1db3_A 134 ELYGLVQE----IPQKETTPF-----------------------------------------YPRSPYAVAKLYAYWITV 168 (372)
T ss_dssp GGGTTCCS----SSBCTTSCC-----------------------------------------CCCSHHHHHHHHHHHHHH
T ss_pred hhhCCCCC----CCCCccCCC-----------------------------------------CCCChHHHHHHHHHHHHH
Confidence 99986432 122222221 346789999999999998
Q ss_pred Hh--hcCCcEEEEecCccccCCCCCCCcccccccccHHHHHHhhcCCc-eeeccCCCceeeeeeHHHHHHHHHHHHHHhc
Q 010075 244 QS--KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNL-RCLVGETKVIMDVIPVDMVVNAMIVAMVAHA 320 (519)
Q Consensus 244 ~~--~~~lp~~IvRPs~V~g~~~~p~~gw~~~~~~~~~~i~~~~~g~~-~~~~~~~~~~~d~vpVDdva~aii~a~~~~~ 320 (519)
.+ ..+++++++||+.+||+...+ .+.. .....++..+..|.. ....++++..++++||+|+|++++.++...
T Consensus 169 ~~~~~~~~~~~~~r~~~~~gp~~~~--~~~~--~~~~~~~~~~~~g~~~~~~~g~~~~~~~~i~v~Dva~a~~~~~~~~- 243 (372)
T 1db3_A 169 NYRESYGMYACNGILFNHESPRRGE--TFVT--RKITRAIANIAQGLESCLYLGNMDSLRDWGHAKDYVKMQWMMLQQE- 243 (372)
T ss_dssp HHHHHHCCCEEEEEECCEECTTSCT--TSHH--HHHHHHHHHHHTTSCCCEEESCTTCEECCEEHHHHHHHHHHTTSSS-
T ss_pred HHHHHhCCCeEEEEECCccCCCCCC--cchh--hHHHHHHHHHHcCCCCceeecCCCceeeeeEHHHHHHHHHHHHhcC-
Confidence 77 348999999999999987532 1211 122344555566653 345688899999999999999999887532
Q ss_pred cCCCCCcEEEecCCCCCchhHHHHHH
Q 010075 321 KQPSDANIYHVGSSLRNPVTLGLQVA 346 (519)
Q Consensus 321 ~~~~~~~iyni~s~~~~~i~~~~~~~ 346 (519)
.+++||++++...++..+...+
T Consensus 244 ----~~~~~ni~~~~~~s~~e~~~~i 265 (372)
T 1db3_A 244 ----QPEDFVIATGVQYSVRQFVEMA 265 (372)
T ss_dssp ----SCCCEEECCCCCEEHHHHHHHH
T ss_pred ----CCceEEEcCCCceeHHHHHHHH
Confidence 1368999998665644444444
|
| >1z7e_A Protein aRNA; rossmann fold, OB-like fold, hydrolase; HET: ATP UGA; 3.00A {Escherichia coli} SCOP: b.46.1.1 c.2.1.2 c.65.1.1 | Back alignment and structure |
|---|
Probab=99.94 E-value=2.2e-26 Score=255.17 Aligned_cols=263 Identities=19% Similarity=0.213 Sum_probs=185.8
Q ss_pred hhhcCCCEEEEeCCccHHHHHHHHHHHHh-CCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCC
Q 010075 7 VEFLENKTILVSGVTGFVAKVFIEKILRV-QPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISE 85 (519)
Q Consensus 7 ~~~~~~k~VlITGaTGFlG~~Lv~~LL~~-g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~ 85 (519)
...+++|+|||||||||||++|+++|++. | ++|+++.|+..... ++. ...
T Consensus 310 ~~~~~~~~VLVTGatG~IG~~l~~~Ll~~~g---~~V~~~~r~~~~~~---~~~-----------------------~~~ 360 (660)
T 1z7e_A 310 CTARRRTRVLILGVNGFIGNHLTERLLREDH---YEVYGLDIGSDAIS---RFL-----------------------NHP 360 (660)
T ss_dssp ----CCEEEEEETTTSHHHHHHHHHHHHSSS---EEEEEEESCCTTTG---GGT-----------------------TCT
T ss_pred hhhccCceEEEEcCCcHHHHHHHHHHHhcCC---CEEEEEEcCchhhh---hhc-----------------------cCC
Confidence 34567899999999999999999999997 5 68999999764321 000 025
Q ss_pred ceEEEeccCCCCCCCCChhhhHHHHhcCccEEEEcCccCCc---cccHHHHHHHhHHHHHHHHHHHHhccCCceEEEEec
Q 010075 86 KITFVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF---DERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVST 162 (519)
Q Consensus 86 ~v~~v~gDl~~~~lgls~~~~~~~l~~~vdiViH~Aa~v~f---~~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V~vST 162 (519)
+++++.+|++++ .+..+.+++++|+|||+||.... ..+....+++|+.|+.+++++|++. + ++|||+||
T Consensus 361 ~v~~v~~Dl~d~------~~~~~~~~~~~D~Vih~Aa~~~~~~~~~~~~~~~~~Nv~gt~~ll~aa~~~-~-~r~V~~SS 432 (660)
T 1z7e_A 361 HFHFVEGDISIH------SEWIEYHVKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKY-R-KRIIFPST 432 (660)
T ss_dssp TEEEEECCTTTC------HHHHHHHHHHCSEEEECCCCCCTHHHHHSHHHHHHHHTHHHHHHHHHHHHT-T-CEEEEECC
T ss_pred ceEEEECCCCCc------HHHHHHhhcCCCEEEECceecCccccccCHHHHHHhhhHHHHHHHHHHHHh-C-CEEEEEec
Confidence 789999999963 23334566789999999998753 3567788999999999999999986 5 89999999
Q ss_pred ceeecCcCC-eeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcHHHHHHHHHHHH
Q 010075 163 AYVAGERTG-LILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEML 241 (519)
Q Consensus 163 a~v~~~~~~-~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~Y~~sK~~aE~l 241 (519)
.++|+...+ .++|. .+... ......+.+.|+.||+.+|++
T Consensus 433 ~~vyg~~~~~~~~E~-----~~~~~----------------------------------~~p~~~p~~~Y~~sK~~~E~~ 473 (660)
T 1z7e_A 433 SEVYGMCSDKYFDED-----HSNLI----------------------------------VGPVNKPRWIYSVSKQLLDRV 473 (660)
T ss_dssp GGGGBTCCSSSBCTT-----TCCEE----------------------------------ECCTTCTTHHHHHHHHHHHHH
T ss_pred HHHcCCCCCcccCCC-----ccccc----------------------------------cCcccCCCCCcHHHHHHHHHH
Confidence 999986432 22332 21100 000013456899999999999
Q ss_pred HHHh--hcCCcEEEEecCccccCCCCCCCcccc-cccccHHHHHHhhcCCceeeccCCCceeeeeeHHHHHHHHHHHHHH
Q 010075 242 MQQS--KENLSLVIIRPTVVSGTYKEPFPGWVE-DLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMIVAMVA 318 (519)
Q Consensus 242 v~~~--~~~lp~~IvRPs~V~g~~~~p~~gw~~-~~~~~~~~i~~~~~g~~~~~~~~~~~~~d~vpVDdva~aii~a~~~ 318 (519)
++.+ ..+++++++||+.|||+...+..++.. .......++..+..|....++++++..++++||+|+|++++.++..
T Consensus 474 ~~~~~~~~gi~~~ilRpg~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~g~~~~~~i~v~Dva~ai~~~l~~ 553 (660)
T 1z7e_A 474 IWAYGEKEGLQFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLIDGGKQKRCFTDIRDGIEALYRIIEN 553 (660)
T ss_dssp HHHHHHHHCCCEEEEEECSEESTTSSCHHHHTTTCSCHHHHHHHHHHHTCCEEEEGGGCCEEECEEHHHHHHHHHHHHHC
T ss_pred HHHHHHHcCCCEEEECCCcccCCCccccccccccccchHHHHHHHHHcCCCcEEeCCCCeEEEEEEHHHHHHHHHHHHhC
Confidence 9876 358999999999999987643111000 0122345566667777767778888999999999999999999874
Q ss_pred hccCCCCCcEEEecCCC-CCchhHHHHHH
Q 010075 319 HAKQPSDANIYHVGSSL-RNPVTLGLQVA 346 (519)
Q Consensus 319 ~~~~~~~~~iyni~s~~-~~~i~~~~~~~ 346 (519)
.... ..+++||++++. ..++..+...+
T Consensus 554 ~~~~-~~g~~~ni~~~~~~~s~~el~~~i 581 (660)
T 1z7e_A 554 AGNR-CDGEIINIGNPENEASIEELGEML 581 (660)
T ss_dssp GGGT-TTTEEEEECCGGGEEEHHHHHHHH
T ss_pred cccc-CCCeEEEECCCCCCcCHHHHHHHH
Confidence 3211 126899999874 44443344443
|
| >2p4h_X Vestitone reductase; NADPH-dependent reductase, isoflavonoid, plant protein; 1.40A {Medicago sativa} | Back alignment and structure |
|---|
Probab=99.94 E-value=3.8e-26 Score=230.27 Aligned_cols=255 Identities=18% Similarity=0.190 Sum_probs=158.4
Q ss_pred CCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEe-cCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEE
Q 010075 12 NKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVR-AADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFV 90 (519)
Q Consensus 12 ~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR-~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v 90 (519)
||+|||||||||||++|+++|++.| .+|++++| +.........+. . .+ ....+++++
T Consensus 1 ~k~vlVTGatG~iG~~l~~~L~~~G---~~V~~~~r~~~~~~~~~~~~~-------------~-~~-----~~~~~~~~~ 58 (322)
T 2p4h_X 1 KGRVCVTGGTGFLGSWIIKSLLENG---YSVNTTIRADPERKRDVSFLT-------------N-LP-----GASEKLHFF 58 (322)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTT---CEEEEECCCC----CCCHHHH-------------T-ST-----THHHHEEEC
T ss_pred CCEEEEECChhHHHHHHHHHHHHCC---CEEEEEEeCCccchhHHHHHH-------------h-hh-----ccCCceEEE
Confidence 6899999999999999999999998 67888888 432110011111 0 00 001357889
Q ss_pred eccCCCCCCCCChhhhHHHHhcCccEEEEcCccCCcc--ccHHHHHHHhHHHHHHHHHHHHhccCCceEEEEecceee-c
Q 010075 91 PGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKFD--ERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAYVA-G 167 (519)
Q Consensus 91 ~gDl~~~~lgls~~~~~~~l~~~vdiViH~Aa~v~f~--~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V~vSTa~v~-~ 167 (519)
.+|+++ ..+ .+.+++++|+|||+|+.+.+. ++.+..+++|+.||.+++++|.+..++++|||+||..++ +
T Consensus 59 ~~Dl~d------~~~-~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~nv~gt~~l~~aa~~~~~~~~iV~~SS~~~~~~ 131 (322)
T 2p4h_X 59 NADLSN------PDS-FAAAIEGCVGIFHTASPIDFAVSEPEEIVTKRTVDGALGILKACVNSKTVKRFIYTSSGSAVSF 131 (322)
T ss_dssp CCCTTC------GGG-GHHHHTTCSEEEECCCCC--------CHHHHHHHHHHHHHHHHHTTCSSCCEEEEEEEGGGTSC
T ss_pred ecCCCC------HHH-HHHHHcCCCEEEEcCCcccCCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEeccHHHccc
Confidence 999995 233 347778999999999876443 223458899999999999999986468899999998753 3
Q ss_pred CcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCc-HHHHHHHHHHHHHHHh-
Q 010075 168 ERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPN-TYVFTKTMGEMLMQQS- 245 (519)
Q Consensus 168 ~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n-~Y~~sK~~aE~lv~~~- 245 (519)
.... +.+++|+.+.+.+... ...+.+ .|+.||+++|.++.++
T Consensus 132 ~~~~---~~~~~e~~~~~~~~~~---------------------------------~~~p~~~~Y~~sK~~~e~~~~~~~ 175 (322)
T 2p4h_X 132 NGKD---KDVLDESDWSDVDLLR---------------------------------SVKPFGWNYAVSKTLAEKAVLEFG 175 (322)
T ss_dssp SSSC---CSEECTTCCCCHHHHH---------------------------------HHCCTTHHHHHHHHHHHHHHHHHH
T ss_pred CCCC---CeecCCccccchhhhc---------------------------------ccCcccccHHHHHHHHHHHHHHHH
Confidence 2110 1122222222211000 002223 6999999999999887
Q ss_pred -hcCCcEEEEecCccccCCCCCC-CcccccccccHHHHHHhhcCCceeeccCCCceeeeeeHHHHHHHHHHHHHHhccCC
Q 010075 246 -KENLSLVIIRPTVVSGTYKEPF-PGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMIVAMVAHAKQP 323 (519)
Q Consensus 246 -~~~lp~~IvRPs~V~g~~~~p~-~gw~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~d~vpVDdva~aii~a~~~~~~~~ 323 (519)
..+++++++||+.|||+...+. +.+ ...+.....|....+ +. ...+++|++|+|++++.++... . .
T Consensus 176 ~~~gi~~~~lrp~~v~g~~~~~~~~~~-------~~~~~~~~~g~~~~~-~~--~~~~~i~v~Dva~a~~~~~~~~-~-~ 243 (322)
T 2p4h_X 176 EQNGIDVVTLILPFIVGRFVCPKLPDS-------IEKALVLVLGKKEQI-GV--TRFHMVHVDDVARAHIYLLENS-V-P 243 (322)
T ss_dssp HHTTCCEEEEEECEEESCCCSSSCCHH-------HHHHTHHHHSCGGGC-CE--EEEEEEEHHHHHHHHHHHHHSC-C-C
T ss_pred HhcCCcEEEEcCCceECCCCCCCCCch-------HHHHHHHHhCCCccC-cC--CCcCEEEHHHHHHHHHHHhhCc-C-C
Confidence 3589999999999999875321 111 111112223332222 22 3349999999999999988532 1 1
Q ss_pred CCCcEEEecCCCCCchhHHHHHH
Q 010075 324 SDANIYHVGSSLRNPVTLGLQVA 346 (519)
Q Consensus 324 ~~~~iyni~s~~~~~i~~~~~~~ 346 (519)
...|| +++...++..+...+
T Consensus 244 --~g~~~-~~~~~~s~~e~~~~i 263 (322)
T 2p4h_X 244 --GGRYN-CSPFIVPIEEMSQLL 263 (322)
T ss_dssp --CEEEE-CCCEEEEHHHHHHHH
T ss_pred --CCCEE-EcCCCCCHHHHHHHH
Confidence 23599 455433433333333
|
| >1vl0_A DTDP-4-dehydrorhamnose reductase, RFBD ortholog; structural joint center for structural genomics, JCSG, protein structu initiative; HET: NAI UNL; 2.05A {Clostridium acetobutylicum} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.94 E-value=9.6e-26 Score=224.47 Aligned_cols=218 Identities=17% Similarity=0.195 Sum_probs=163.5
Q ss_pred CCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEE
Q 010075 11 ENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFV 90 (519)
Q Consensus 11 ~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v 90 (519)
..++|||||||||||++|+++|++.| .+|+++.|+
T Consensus 11 ~~~~vlVtGatG~iG~~l~~~L~~~g---~~V~~~~r~------------------------------------------ 45 (292)
T 1vl0_A 11 HHMKILITGANGQLGREIQKQLKGKN---VEVIPTDVQ------------------------------------------ 45 (292)
T ss_dssp -CEEEEEESTTSHHHHHHHHHHTTSS---EEEEEECTT------------------------------------------
T ss_pred ccceEEEECCCChHHHHHHHHHHhCC---CeEEeccCc------------------------------------------
Confidence 45899999999999999999999988 678888874
Q ss_pred eccCCCCCCCCChhhhHHHHhc--CccEEEEcCccCCcc---ccHHHHHHHhHHHHHHHHHHHHhccCCceEEEEeccee
Q 010075 91 PGDISSEDLGLKDSNLKEELWN--ELDIMVNSAAITKFD---ERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAYV 165 (519)
Q Consensus 91 ~gDl~~~~lgls~~~~~~~l~~--~vdiViH~Aa~v~f~---~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V~vSTa~v 165 (519)
.+|+++ .+....+++ ++|+|||+||..... ++.+..+++|+.|+.+++++|++. +. +|||+||.++
T Consensus 46 ~~Dl~d-------~~~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~nv~~~~~l~~a~~~~-~~-~iv~~SS~~v 116 (292)
T 1vl0_A 46 DLDITN-------VLAVNKFFNEKKPNVVINCAAHTAVDKCEEQYDLAYKINAIGPKNLAAAAYSV-GA-EIVQISTDYV 116 (292)
T ss_dssp TCCTTC-------HHHHHHHHHHHCCSEEEECCCCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHH-TC-EEEEEEEGGG
T ss_pred cCCCCC-------HHHHHHHHHhcCCCEEEECCccCCHHHHhcCHHHHHHHHHHHHHHHHHHHHHc-CC-eEEEechHHe
Confidence 357774 333345565 799999999987642 567888999999999999999986 56 9999999999
Q ss_pred ecCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcHHHHHHHHHHHHHHHh
Q 010075 166 AGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLMQQS 245 (519)
Q Consensus 166 ~~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~Y~~sK~~aE~lv~~~ 245 (519)
|+...+ .+++|+.+. .+.+.|+.||+.+|.+++.+
T Consensus 117 ~~~~~~----~~~~E~~~~-----------------------------------------~~~~~Y~~sK~~~E~~~~~~ 151 (292)
T 1vl0_A 117 FDGEAK----EPITEFDEV-----------------------------------------NPQSAYGKTKLEGENFVKAL 151 (292)
T ss_dssp SCSCCS----SCBCTTSCC-----------------------------------------CCCSHHHHHHHHHHHHHHHH
T ss_pred ECCCCC----CCCCCCCCC-----------------------------------------CCccHHHHHHHHHHHHHHhh
Confidence 986431 122222221 34678999999999999986
Q ss_pred hcCCcEEEEecCccccCCCCCCCcccccccccHHHHHHhhcCCceeeccCCCceeeeeeHHHHHHHHHHHHHHhccCCCC
Q 010075 246 KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMIVAMVAHAKQPSD 325 (519)
Q Consensus 246 ~~~lp~~IvRPs~V~g~~~~p~~gw~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~d~vpVDdva~aii~a~~~~~~~~~~ 325 (519)
. .+++++||+.|||+ .. + ....++.....|....+.+ +...++++++|+|++++.++... .
T Consensus 152 ~--~~~~~lR~~~v~G~-~~---~------~~~~~~~~~~~~~~~~~~~--~~~~~~i~v~Dva~~~~~~~~~~-----~ 212 (292)
T 1vl0_A 152 N--PKYYIVRTAWLYGD-GN---N------FVKTMINLGKTHDELKVVH--DQVGTPTSTVDLARVVLKVIDEK-----N 212 (292)
T ss_dssp C--SSEEEEEECSEESS-SS---C------HHHHHHHHHHHCSEEEEES--SCEECCEEHHHHHHHHHHHHHHT-----C
T ss_pred C--CCeEEEeeeeeeCC-Cc---C------hHHHHHHHHhcCCcEEeec--CeeeCCccHHHHHHHHHHHHhcC-----C
Confidence 3 46999999999998 31 1 1223444445565544554 47889999999999999998753 2
Q ss_pred CcEEEecCCCCCchhHHHHHH
Q 010075 326 ANIYHVGSSLRNPVTLGLQVA 346 (519)
Q Consensus 326 ~~iyni~s~~~~~i~~~~~~~ 346 (519)
+++||++++...++..+...+
T Consensus 213 ~~~~~i~~~~~~s~~e~~~~i 233 (292)
T 1vl0_A 213 YGTFHCTCKGICSWYDFAVEI 233 (292)
T ss_dssp CEEEECCCBSCEEHHHHHHHH
T ss_pred CcEEEecCCCCccHHHHHHHH
Confidence 679999998655543344433
|
| >4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.94 E-value=2.1e-25 Score=223.03 Aligned_cols=226 Identities=16% Similarity=0.100 Sum_probs=160.1
Q ss_pred CEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEEec
Q 010075 13 KTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVPG 92 (519)
Q Consensus 13 k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v~g 92 (519)
|+|||||||||||++|+++|+++| ++|++++|+.... + +..
T Consensus 1 MkILVTGatGfIG~~L~~~L~~~G---~~V~~l~R~~~~~---------------------------------~---~~~ 41 (298)
T 4b4o_A 1 MRVLVGGGTGFIGTALTQLLNARG---HEVTLVSRKPGPG---------------------------------R---ITW 41 (298)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTT---CEEEEEESSCCTT---------------------------------E---EEH
T ss_pred CEEEEECCCCHHHHHHHHHHHHCC---CEEEEEECCCCcC---------------------------------e---eec
Confidence 689999999999999999999999 6789999975321 1 111
Q ss_pred cCCCCCCCCChhhhHHHHhcCccEEEEcCccCC------cc-ccHHHHHHHhHHHHHHHHHHHHhcc-CCceEEEEecce
Q 010075 93 DISSEDLGLKDSNLKEELWNELDIMVNSAAITK------FD-ERYDVAFGINTLGVIHLVNFAKKCV-KLKVFVHVSTAY 164 (519)
Q Consensus 93 Dl~~~~lgls~~~~~~~l~~~vdiViH~Aa~v~------f~-~~~~~~~~~Nv~gt~~ll~~a~~~~-~l~~~V~vSTa~ 164 (519)
| +.....++++|.|||+|+..- ++ ...+.....|+.+|.+|+++++..+ +.+.||+.||++
T Consensus 42 ~-----------~~~~~~l~~~d~vihla~~~i~~~~~~~~~~~~~~~~~~~v~~t~~l~~~~~~~~~~~~~~i~~Ss~~ 110 (298)
T 4b4o_A 42 D-----------ELAASGLPSCDAAVNLAGENILNPLRRWNETFQKEVLGSRLETTQLLAKAITKAPQPPKAWVLVTGVA 110 (298)
T ss_dssp H-----------HHHHHCCCSCSEEEECCCCCSSCTTSCCCHHHHHHHHHHHHHHHHHHHHHHHHCSSCCSEEEEEEEGG
T ss_pred c-----------hhhHhhccCCCEEEEeccCcccchhhhhhhhhhhhhhhHHHHHHHHHHHHHHHhCCCceEEEEEeeee
Confidence 1 111244578999999998532 12 2345668899999999999998863 345699999999
Q ss_pred eecCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcHHHHHHHHHHHHHHH
Q 010075 165 VAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLMQQ 244 (519)
Q Consensus 165 v~~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~Y~~sK~~aE~lv~~ 244 (519)
+|++..+ .+..|+.+. .+.+.|+.+|...|.....
T Consensus 111 vyg~~~~----~~~~E~~p~-----------------------------------------~~~~~~~~~~~~~e~~~~~ 145 (298)
T 4b4o_A 111 YYQPSLT----AEYDEDSPG-----------------------------------------GDFDFFSNLVTKWEAAARL 145 (298)
T ss_dssp GSCCCSS----CCBCTTCCC-----------------------------------------SCSSHHHHHHHHHHHHHCC
T ss_pred eecCCCC----CcccccCCc-----------------------------------------cccchhHHHHHHHHHHHHh
Confidence 9997542 222222221 3456688888887776554
Q ss_pred hhcCCcEEEEecCccccCCCCCCCcccccccccHHHHHHhhcCCceeeccCCCceeeeeeHHHHHHHHHHHHHHhccCCC
Q 010075 245 SKENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMIVAMVAHAKQPS 324 (519)
Q Consensus 245 ~~~~lp~~IvRPs~V~g~~~~p~~gw~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~d~vpVDdva~aii~a~~~~~~~~~ 324 (519)
...+++++++||+.|||+.. |+ ...++.....|.. ...+++++.+++|||||+|++++.++.+...
T Consensus 146 ~~~~~~~~~~r~~~v~g~~~----~~------~~~~~~~~~~~~~-~~~g~g~~~~~~ihv~Dva~a~~~~~~~~~~--- 211 (298)
T 4b4o_A 146 PGDSTRQVVVRSGVVLGRGG----GA------MGHMLLPFRLGLG-GPIGSGHQFFPWIHIGDLAGILTHALEANHV--- 211 (298)
T ss_dssp SSSSSEEEEEEECEEECTTS----HH------HHHHHHHHHTTCC-CCBTTSCSBCCEEEHHHHHHHHHHHHHCTTC---
T ss_pred hccCCceeeeeeeeEEcCCC----Cc------hhHHHHHHhcCCc-ceecccCceeecCcHHHHHHHHHHHHhCCCC---
Confidence 46789999999999999864 21 2233444444443 3458999999999999999999999874322
Q ss_pred CCcEEEecCCCCCchhHHHHHHHH
Q 010075 325 DANIYHVGSSLRNPVTLGLQVANT 348 (519)
Q Consensus 325 ~~~iyni~s~~~~~i~~~~~~~~~ 348 (519)
.++||++++...+...+...+..
T Consensus 212 -~g~yn~~~~~~~t~~e~~~~ia~ 234 (298)
T 4b4o_A 212 -HGVLNGVAPSSATNAEFAQTFGA 234 (298)
T ss_dssp -CEEEEESCSCCCBHHHHHHHHHH
T ss_pred -CCeEEEECCCccCHHHHHHHHHH
Confidence 46999999966665555555443
|
| >1n7h_A GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR, short-chain dehydrogenase/reductase, LYA; HET: NDP GDP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1n7g_A* | Back alignment and structure |
|---|
Probab=99.94 E-value=1.1e-25 Score=232.79 Aligned_cols=253 Identities=14% Similarity=0.119 Sum_probs=177.3
Q ss_pred CEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCC-ceEEEe
Q 010075 13 KTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISE-KITFVP 91 (519)
Q Consensus 13 k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~-~v~~v~ 91 (519)
|+|||||||||||++|++.|++.| .+|+++.|+...... +++. .+ .+.+.. ... ++.++.
T Consensus 29 k~vlVtGatG~IG~~l~~~L~~~g---~~V~~~~r~~~~~~~-~~~~-~~-----~~~~~~---------~~~~~~~~~~ 89 (381)
T 1n7h_A 29 KIALITGITGQDGSYLTEFLLGKG---YEVHGLIRRSSNFNT-QRIN-HI-----YIDPHN---------VNKALMKLHY 89 (381)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTT---CEEEEEECCCSSCCC-TTTT-TT-----C-----------------CCEEEEE
T ss_pred CeEEEEcCCchHHHHHHHHHHHCC---CEEEEEecCCccccc-hhhh-hh-----hhcccc---------ccccceEEEE
Confidence 589999999999999999999988 688999997643110 0000 00 000000 012 788999
Q ss_pred ccCCCCCCCCChhhhHHHHhc--CccEEEEcCccCCcc---ccHHHHHHHhHHHHHHHHHHHHhccCCc-----eEEEEe
Q 010075 92 GDISSEDLGLKDSNLKEELWN--ELDIMVNSAAITKFD---ERYDVAFGINTLGVIHLVNFAKKCVKLK-----VFVHVS 161 (519)
Q Consensus 92 gDl~~~~lgls~~~~~~~l~~--~vdiViH~Aa~v~f~---~~~~~~~~~Nv~gt~~ll~~a~~~~~l~-----~~V~vS 161 (519)
+|+++ .+....+++ ++|+|||+||..... +++...+++|+.|+.+++++|.+. +++ +|||+|
T Consensus 90 ~Dl~d-------~~~~~~~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~l~~a~~~~-~~~~~~~~~~v~~S 161 (381)
T 1n7h_A 90 ADLTD-------ASSLRRWIDVIKPDEVYNLAAQSHVAVSFEIPDYTADVVATGALRLLEAVRSH-TIDSGRTVKYYQAG 161 (381)
T ss_dssp CCTTC-------HHHHHHHHHHHCCSEEEECCSCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHH-HHHHCCCCEEEEEE
T ss_pred CCCCC-------HHHHHHHHHhcCCCEEEECCcccCccccccCHHHHHHHHHHHHHHHHHHHHHh-CCccCCccEEEEeC
Confidence 99995 333345555 479999999987653 567788999999999999999986 555 999999
Q ss_pred cceeecCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcHHHHHHHHHHHH
Q 010075 162 TAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEML 241 (519)
Q Consensus 162 Ta~v~~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~Y~~sK~~aE~l 241 (519)
|.++|+...+.++|. .+. .+.+.|+.||+.+|.+
T Consensus 162 S~~vyg~~~~~~~E~-----~~~-----------------------------------------~~~~~Y~~sK~~~E~~ 195 (381)
T 1n7h_A 162 SSEMFGSTPPPQSET-----TPF-----------------------------------------HPRSPYAASKCAAHWY 195 (381)
T ss_dssp EGGGGTTSCSSBCTT-----SCC-----------------------------------------CCCSHHHHHHHHHHHH
T ss_pred cHHHhCCCCCCCCCC-----CCC-----------------------------------------CCCCchHHHHHHHHHH
Confidence 999998654322222 221 3467899999999999
Q ss_pred HHHh--hcCCcEEEEecCccccCCCCCCCcccccccccHHHHHHhhcCCc-eeeccCCCceeeeeeHHHHHHHHHHHHHH
Q 010075 242 MQQS--KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNL-RCLVGETKVIMDVIPVDMVVNAMIVAMVA 318 (519)
Q Consensus 242 v~~~--~~~lp~~IvRPs~V~g~~~~p~~gw~~~~~~~~~~i~~~~~g~~-~~~~~~~~~~~d~vpVDdva~aii~a~~~ 318 (519)
++.+ ..+++++++||+.++|+...+ .+.. .....++..+..|.. ....++++..+++++|+|+|++++.++..
T Consensus 196 ~~~~~~~~~~~~~~~r~~~~~gp~~~~--~~~~--~~~~~~~~~~~~g~~~~~~~g~~~~~~~~v~v~Dva~a~~~~~~~ 271 (381)
T 1n7h_A 196 TVNYREAYGLFACNGILFNHESPRRGE--NFVT--RKITRALGRIKVGLQTKLFLGNLQASRDWGFAGDYVEAMWLMLQQ 271 (381)
T ss_dssp HHHHHHHHCCEEEEEEECCEECTTSCT--TSHH--HHHHHHHHHHHHTSCCCEEESCTTCEEECEEHHHHHHHHHHHHTS
T ss_pred HHHHHHHhCCcEEEEEeCceeCCCCCC--cchh--HHHHHHHHHHHcCCCCeEEeCCCCceeeeEEHHHHHHHHHHHHhC
Confidence 9887 348999999999999986521 1111 112233444455543 33468888999999999999999998853
Q ss_pred hccCCCCCcEEEecCCCCCchhHHHHHHH
Q 010075 319 HAKQPSDANIYHVGSSLRNPVTLGLQVAN 347 (519)
Q Consensus 319 ~~~~~~~~~iyni~s~~~~~i~~~~~~~~ 347 (519)
.. .++||++++...++..+...+.
T Consensus 272 ~~-----~~~~~i~~~~~~s~~e~~~~i~ 295 (381)
T 1n7h_A 272 EK-----PDDYVVATEEGHTVEEFLDVSF 295 (381)
T ss_dssp SS-----CCEEEECCSCEEEHHHHHHHHH
T ss_pred CC-----CCeEEeeCCCCCcHHHHHHHHH
Confidence 21 3699999986555444444443
|
| >2c29_D Dihydroflavonol 4-reductase; flavonoids, short dehydrogenase reductase, NADPH, dihydroquercetin, rossmann fold, oxidoreductase; HET: NAP DQH; 1.81A {Vitis vinifera} PDB: 2iod_A* 2nnl_D* 3bxx_A* 3c1t_A* | Back alignment and structure |
|---|
Probab=99.94 E-value=2.1e-25 Score=226.67 Aligned_cols=244 Identities=16% Similarity=0.172 Sum_probs=157.9
Q ss_pred CCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEE
Q 010075 11 ENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFV 90 (519)
Q Consensus 11 ~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v 90 (519)
++|+|||||||||||++|+++|++.| ++|++++|+.........+. + .+. ...+++++
T Consensus 4 ~~~~vlVTGatGfIG~~l~~~L~~~G---~~V~~~~r~~~~~~~~~~~~----~----------~~~-----~~~~~~~~ 61 (337)
T 2c29_D 4 QSETVCVTGASGFIGSWLVMRLLERG---YTVRATVRDPTNVKKVKHLL----D----------LPK-----AETHLTLW 61 (337)
T ss_dssp --CEEEETTTTSHHHHHHHHHHHHTT---CEEEEEESCTTCHHHHHHHH----T----------STT-----HHHHEEEE
T ss_pred CCCEEEEECCchHHHHHHHHHHHHCC---CEEEEEECCcchhHHHHHHH----h----------ccc-----CCCeEEEE
Confidence 47899999999999999999999998 67888999764321111111 0 000 01357899
Q ss_pred eccCCCCCCCCChhhhHHHHhcCccEEEEcCccCCcc--ccHHHHHHHhHHHHHHHHHHHHhccCCceEEEEeccee-ec
Q 010075 91 PGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKFD--ERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAYV-AG 167 (519)
Q Consensus 91 ~gDl~~~~lgls~~~~~~~l~~~vdiViH~Aa~v~f~--~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V~vSTa~v-~~ 167 (519)
.+|++++ .+ ...+++++|+|||+||...+. ++.+..+++|+.||.+++++|++..++++|||+||+.+ ++
T Consensus 62 ~~Dl~d~------~~-~~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~riV~~SS~~~~~~ 134 (337)
T 2c29_D 62 KADLADE------GS-FDEAIKGCTGVFHVATPMDFESKDPENEVIKPTIEGMLGIMKSCAAAKTVRRLVFTSSAGTVNI 134 (337)
T ss_dssp ECCTTST------TT-THHHHTTCSEEEECCCCCCSSCSSHHHHTHHHHHHHHHHHHHHHHHHSCCCEEEEECCGGGTSC
T ss_pred EcCCCCH------HH-HHHHHcCCCEEEEeccccCCCCCChHHHHHHHHHHHHHHHHHHHHhCCCccEEEEeeeHhhccc
Confidence 9999963 23 346778899999999976543 23445789999999999999998644899999999874 44
Q ss_pred CcC--CeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcHHHHHHHHHHHHHHHh
Q 010075 168 ERT--GLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLMQQS 245 (519)
Q Consensus 168 ~~~--~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~Y~~sK~~aE~lv~~~ 245 (519)
... ..++|. .+.+.+... ....+.+.|+.||.++|+++.++
T Consensus 135 ~~~~~~~~~E~-----~~~~~~~~~--------------------------------~~~~~~~~Y~~sK~~~E~~~~~~ 177 (337)
T 2c29_D 135 QEHQLPVYDES-----CWSDMEFCR--------------------------------AKKMTAWMYFVSKTLAEQAAWKY 177 (337)
T ss_dssp SSSCCSEECTT-----CCCCHHHHH--------------------------------HHCCTTHHHHHHHHHHHHHHHHH
T ss_pred CCCCCcccCcc-----cCCchhhhc--------------------------------ccCCccchHHHHHHHHHHHHHHH
Confidence 321 123333 221111000 00023457999999999999876
Q ss_pred --hcCCcEEEEecCccccCCCCCCCcccccccccHHHHH--HhhcCCceeeccCCCceeeeeeHHHHHHHHHHHHHHhcc
Q 010075 246 --KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFV--ASAQGNLRCLVGETKVIMDVIPVDMVVNAMIVAMVAHAK 321 (519)
Q Consensus 246 --~~~lp~~IvRPs~V~g~~~~p~~gw~~~~~~~~~~i~--~~~~g~~~~~~~~~~~~~d~vpVDdva~aii~a~~~~~~ 321 (519)
..+++++++||+.|||+...+. ....+.. ....|... ..+.. ....++||+|+|++++.++....
T Consensus 178 ~~~~gi~~~~lrp~~v~Gp~~~~~--------~~~~~~~~~~~~~g~~~-~~~~~-~~~~~i~v~Dva~a~~~~~~~~~- 246 (337)
T 2c29_D 178 AKENNIDFITIIPTLVVGPFIMSS--------MPPSLITALSPITGNEA-HYSII-RQGQFVHLDDLCNAHIYLFENPK- 246 (337)
T ss_dssp HHHHTCCEEEEEECEEESCCSCSS--------CCHHHHHHTHHHHTCGG-GHHHH-TEEEEEEHHHHHHHHHHHHHCTT-
T ss_pred HHHcCCcEEEEeCCceECCCCCCC--------CCchHHHHHHHHcCCCc-ccccc-CCCCEEEHHHHHHHHHHHhcCcc-
Confidence 3589999999999999875321 0111111 11223211 11111 23459999999999999886321
Q ss_pred CCCCCcEEEecCC
Q 010075 322 QPSDANIYHVGSS 334 (519)
Q Consensus 322 ~~~~~~iyni~s~ 334 (519)
...+|+++++
T Consensus 247 ---~~~~~~~~~~ 256 (337)
T 2c29_D 247 ---AEGRYICSSH 256 (337)
T ss_dssp ---CCEEEEECCE
T ss_pred ---cCceEEEeCC
Confidence 1357877553
|
| >2rh8_A Anthocyanidin reductase; flavonoids, rossmann fold, short chain dehydrogenase/reductase, oxidoreductase; 2.22A {Vitis vinifera} PDB: 3hfs_A | Back alignment and structure |
|---|
Probab=99.94 E-value=1.8e-26 Score=234.68 Aligned_cols=243 Identities=20% Similarity=0.242 Sum_probs=155.4
Q ss_pred CCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEEe
Q 010075 12 NKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVP 91 (519)
Q Consensus 12 ~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v~ 91 (519)
+|+|||||||||||++|+++|++.| ++|++++|+.........+. . +. ...+++++.
T Consensus 9 ~~~vlVTGatGfIG~~l~~~Ll~~G---~~V~~~~r~~~~~~~~~~~~-~---------~~----------~~~~~~~~~ 65 (338)
T 2rh8_A 9 KKTACVVGGTGFVASLLVKLLLQKG---YAVNTTVRDPDNQKKVSHLL-E---------LQ----------ELGDLKIFR 65 (338)
T ss_dssp CCEEEEECTTSHHHHHHHHHHHHTT---CEEEEEESCTTCTTTTHHHH-H---------HG----------GGSCEEEEE
T ss_pred CCEEEEECCchHHHHHHHHHHHHCC---CEEEEEEcCcchhhhHHHHH-h---------cC----------CCCcEEEEe
Confidence 6899999999999999999999998 67888899754321111111 0 00 024688999
Q ss_pred ccCCCCCCCCChhhhHHHHhcCccEEEEcCccCCcc--ccHHHHHHHhHHHHHHHHHHHHhccCCceEEEEeccee-ecC
Q 010075 92 GDISSEDLGLKDSNLKEELWNELDIMVNSAAITKFD--ERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAYV-AGE 168 (519)
Q Consensus 92 gDl~~~~lgls~~~~~~~l~~~vdiViH~Aa~v~f~--~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V~vSTa~v-~~~ 168 (519)
+|++++ .+. ..+++++|+|||+||...+. ++.+..+++|+.||.+++++|++..++++|||+||+.+ ++.
T Consensus 66 ~Dl~d~------~~~-~~~~~~~D~Vih~A~~~~~~~~~~~~~~~~~nv~gt~~ll~aa~~~~~v~r~V~~SS~~~~~~~ 138 (338)
T 2rh8_A 66 ADLTDE------LSF-EAPIAGCDFVFHVATPVHFASEDPENDMIKPAIQGVVNVMKACTRAKSVKRVILTSSAAAVTIN 138 (338)
T ss_dssp CCTTTS------SSS-HHHHTTCSEEEEESSCCCC---------CHHHHHHHHHHHHHHHHCTTCCEEEEECCHHHHHHH
T ss_pred cCCCCh------HHH-HHHHcCCCEEEEeCCccCCCCCCcHHHHHHHHHHHHHHHHHHHHHcCCcCEEEEEecHHHeecC
Confidence 999963 233 46678899999999976543 22344789999999999999998644899999999873 332
Q ss_pred cC-C---eeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCc-HHHHHHHHHHHHHH
Q 010075 169 RT-G---LILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPN-TYVFTKTMGEMLMQ 243 (519)
Q Consensus 169 ~~-~---~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n-~Y~~sK~~aE~lv~ 243 (519)
.. + .++|... .+.+.. ....+++ .|+.||.++|++++
T Consensus 139 ~~~~~~~~~~E~~~-----~~~~~~---------------------------------~~~~~~~~~Y~~sK~~~E~~~~ 180 (338)
T 2rh8_A 139 QLDGTGLVVDEKNW-----TDIEFL---------------------------------TSAKPPTWGYPASKTLAEKAAW 180 (338)
T ss_dssp HHTCSCCCCCTTTT-----TCC----------------------------------------CCCCCCTTSCCHHHHHHH
T ss_pred CcCCCCcccChhhc-----cchhhc---------------------------------cccCCccchHHHHHHHHHHHHH
Confidence 11 1 2333321 110000 0001122 59999999999998
Q ss_pred Hh--hcCCcEEEEecCccccCCCCCC-CcccccccccHHHHHHhhcCCceeeccC------CCceeeeeeHHHHHHHHHH
Q 010075 244 QS--KENLSLVIIRPTVVSGTYKEPF-PGWVEDLKTINTLFVASAQGNLRCLVGE------TKVIMDVIPVDMVVNAMIV 314 (519)
Q Consensus 244 ~~--~~~lp~~IvRPs~V~g~~~~p~-~gw~~~~~~~~~~i~~~~~g~~~~~~~~------~~~~~d~vpVDdva~aii~ 314 (519)
++ ..+++++++||+.|||+...+. +... ..+.....|.... .+. +....+++||+|+|++++.
T Consensus 181 ~~~~~~gi~~~~lrp~~v~Gp~~~~~~~~~~-------~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~i~v~Dva~a~~~ 252 (338)
T 2rh8_A 181 KFAEENNIDLITVIPTLMAGSSLTSDVPSSI-------GLAMSLITGNEFL-INGMKGMQMLSGSVSIAHVEDVCRAHIF 252 (338)
T ss_dssp HHHHHHTCCEEEEEECEEESCCSSSSCCHHH-------HHHHHHHHTCHHH-HHHHHHHHHHHSSEEEEEHHHHHHHHHH
T ss_pred HHHHHcCCcEEEEeCCceECCCCCCCCCchH-------HHHHHHHcCCccc-cccccccccccCcccEEEHHHHHHHHHH
Confidence 76 3589999999999999976431 1111 1111122332111 111 1123589999999999999
Q ss_pred HHHHhccCCCCCcEEEecCC
Q 010075 315 AMVAHAKQPSDANIYHVGSS 334 (519)
Q Consensus 315 a~~~~~~~~~~~~iyni~s~ 334 (519)
++.... ....||++++
T Consensus 253 ~~~~~~----~~~~~~~~~~ 268 (338)
T 2rh8_A 253 VAEKES----ASGRYICCAA 268 (338)
T ss_dssp HHHCTT----CCEEEEECSE
T ss_pred HHcCCC----cCCcEEEecC
Confidence 886321 1357888654
|
| >3rft_A Uronate dehydrogenase; apoenzyme, rossmann fold, NAD binding, oxidoreductase; 1.90A {Agrobacterium tumefaciens} PDB: 3rfv_A* 3rfx_A* | Back alignment and structure |
|---|
Probab=99.94 E-value=2.9e-25 Score=218.87 Aligned_cols=206 Identities=17% Similarity=0.151 Sum_probs=161.4
Q ss_pred CCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEE
Q 010075 11 ENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFV 90 (519)
Q Consensus 11 ~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v 90 (519)
++|+|||||||||||++++++|++.| .+|+++.|+..... ..+++++
T Consensus 2 ~~k~vlVTGasg~IG~~la~~L~~~G---~~V~~~~r~~~~~~------------------------------~~~~~~~ 48 (267)
T 3rft_A 2 AMKRLLVTGAAGQLGRVMRERLAPMA---EILRLADLSPLDPA------------------------------GPNEECV 48 (267)
T ss_dssp CEEEEEEESTTSHHHHHHHHHTGGGE---EEEEEEESSCCCCC------------------------------CTTEEEE
T ss_pred CCCEEEEECCCCHHHHHHHHHHHhcC---CEEEEEecCCcccc------------------------------CCCCEEE
Confidence 46899999999999999999999998 68899999864321 2578999
Q ss_pred eccCCCCCCCCChhhhHHHHhcCccEEEEcCccCCccccHHHHHHHhHHHHHHHHHHHHhccCCceEEEEecceeecCcC
Q 010075 91 PGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKFDERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAYVAGERT 170 (519)
Q Consensus 91 ~gDl~~~~lgls~~~~~~~l~~~vdiViH~Aa~v~f~~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V~vSTa~v~~~~~ 170 (519)
.+|+++ .+....+++++|+|||+||.. ..++++..+++|+.|+.+++++|++. +.++|||+||..+++...
T Consensus 49 ~~Dl~d-------~~~~~~~~~~~D~vi~~Ag~~-~~~~~~~~~~~N~~g~~~l~~a~~~~-~~~~iv~~SS~~~~g~~~ 119 (267)
T 3rft_A 49 QCDLAD-------ANAVNAMVAGCDGIVHLGGIS-VEKPFEQILQGNIIGLYNLYEAARAH-GQPRIVFASSNHTIGYYP 119 (267)
T ss_dssp ECCTTC-------HHHHHHHHTTCSEEEECCSCC-SCCCHHHHHHHHTHHHHHHHHHHHHT-TCCEEEEEEEGGGGTTSB
T ss_pred EcCCCC-------HHHHHHHHcCCCEEEECCCCc-CcCCHHHHHHHHHHHHHHHHHHHHHc-CCCEEEEEcchHHhCCCC
Confidence 999994 444568888999999999984 45678899999999999999999886 789999999999987432
Q ss_pred CeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcHHHHHHHHHHHHHHHh--hcC
Q 010075 171 GLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLMQQS--KEN 248 (519)
Q Consensus 171 ~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~Y~~sK~~aE~lv~~~--~~~ 248 (519)
. ..++.|+.+ ..+.+.|+.||+.+|.+++.+ ..+
T Consensus 120 ~---~~~~~e~~~-----------------------------------------~~~~~~Y~~sK~~~e~~~~~~a~~~g 155 (267)
T 3rft_A 120 Q---TERLGPDVP-----------------------------------------ARPDGLYGVSKCFGENLARMYFDKFG 155 (267)
T ss_dssp T---TSCBCTTSC-----------------------------------------CCCCSHHHHHHHHHHHHHHHHHHHHC
T ss_pred C---CCCCCCCCC-----------------------------------------CCCCChHHHHHHHHHHHHHHHHHHhC
Confidence 1 112222121 145678999999999999876 458
Q ss_pred CcEEEEecCccccCCCCCCCcccccccccHHHHHHhhcCCceeeccCCCceeeeeeHHHHHHHHHHHHHHhccCCCCCcE
Q 010075 249 LSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMIVAMVAHAKQPSDANI 328 (519)
Q Consensus 249 lp~~IvRPs~V~g~~~~p~~gw~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~d~vpVDdva~aii~a~~~~~~~~~~~~i 328 (519)
++++++||+.|+|+. +++....++++++|+++++..++..... ...+
T Consensus 156 ~~~~~vr~~~v~~~~------------------------------~~~~~~~~~~~~~d~a~~~~~~~~~~~~---~~~~ 202 (267)
T 3rft_A 156 QETALVRIGSCTPEP------------------------------NNYRMLSTWFSHDDFVSLIEAVFRAPVL---GCPV 202 (267)
T ss_dssp CCEEEEEECBCSSSC------------------------------CSTTHHHHBCCHHHHHHHHHHHHHCSCC---CSCE
T ss_pred CeEEEEEeecccCCC------------------------------CCCCceeeEEcHHHHHHHHHHHHhCCCC---CceE
Confidence 999999999999862 2234456789999999999888864322 1357
Q ss_pred EEecCCC
Q 010075 329 YHVGSSL 335 (519)
Q Consensus 329 yni~s~~ 335 (519)
++++++.
T Consensus 203 ~~~~s~~ 209 (267)
T 3rft_A 203 VWGASAN 209 (267)
T ss_dssp EEECCCC
T ss_pred EEEeCCC
Confidence 7777764
|
| >2v6g_A Progesterone 5-beta-reductase; tyrosine-dependent oxidoreductase, oxidoreductase, SDR, cardenolides, cardiac glycosides; HET: NAP; 2.3A {Digitalis lanata} PDB: 2v6f_A* | Back alignment and structure |
|---|
Probab=99.93 E-value=4.6e-25 Score=226.19 Aligned_cols=246 Identities=15% Similarity=0.108 Sum_probs=173.7
Q ss_pred CCEEEEeCCccHHHHHHHHHHHHhCC--CccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 010075 12 NKTILVSGVTGFVAKVFIEKILRVQP--NVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (519)
Q Consensus 12 ~k~VlITGaTGFlG~~Lv~~LL~~g~--~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (519)
+|+|||||||||||++|+++|++.|+ .+.+|++++|+..... ....++++
T Consensus 1 ~~~vlVtGatG~iG~~l~~~L~~~g~~~~~~~V~~~~r~~~~~~----------------------------~~~~~~~~ 52 (364)
T 2v6g_A 1 SSVALIVGVTGIIGNSLAEILPLADTPGGPWKVYGVARRTRPAW----------------------------HEDNPINY 52 (364)
T ss_dssp CEEEEEETTTSHHHHHHHHHTTSTTCTTCSEEEEEEESSCCCSC----------------------------CCSSCCEE
T ss_pred CCEEEEECCCcHHHHHHHHHHHhCCCCCCceEEEEEeCCCCccc----------------------------cccCceEE
Confidence 57999999999999999999999772 2357899999865431 01257889
Q ss_pred EeccCCCCCCCCChhhhHHHHhcC---ccEEEEcCccCCccccHHHHHHHhHHHHHHHHHHHHhc-cCCceEE-------
Q 010075 90 VPGDISSEDLGLKDSNLKEELWNE---LDIMVNSAAITKFDERYDVAFGINTLGVIHLVNFAKKC-VKLKVFV------- 158 (519)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~~~---vdiViH~Aa~v~f~~~~~~~~~~Nv~gt~~ll~~a~~~-~~l~~~V------- 158 (519)
+.+|+++ .+....++++ +|+|||+||... .+....+++|+.|+.+++++|++. +++++||
T Consensus 53 ~~~Dl~d-------~~~~~~~~~~~~~~d~vih~a~~~~--~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~~v~~~g~~i 123 (364)
T 2v6g_A 53 VQCDISD-------PDDSQAKLSPLTDVTHVFYVTWANR--STEQENCEANSKMFRNVLDAVIPNCPNLKHISLQTGRKH 123 (364)
T ss_dssp EECCTTS-------HHHHHHHHTTCTTCCEEEECCCCCC--SSHHHHHHHHHHHHHHHHHHHTTTCTTCCEEEEECCTHH
T ss_pred EEeecCC-------HHHHHHHHhcCCCCCEEEECCCCCc--chHHHHHHHhHHHHHHHHHHHHHhccccceEEeccCceE
Confidence 9999995 3334466776 999999999764 567788999999999999999985 2688998
Q ss_pred EEecceeecCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcHHHHHHHHH
Q 010075 159 HVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMG 238 (519)
Q Consensus 159 ~vSTa~v~~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~Y~~sK~~a 238 (519)
|+||..+||.... .+.++.|+.+.. +.++.| +.+
T Consensus 124 ~~Ss~~vyg~~~~--~~~~~~E~~~~~----------------------------------------~~~~~y----~~~ 157 (364)
T 2v6g_A 124 YMGPFESYGKIES--HDPPYTEDLPRL----------------------------------------KYMNFY----YDL 157 (364)
T ss_dssp HHCCGGGTTTSCC--CCSSBCTTSCCC----------------------------------------SSCCHH----HHH
T ss_pred EEechhhcccccc--CCCCCCccccCC----------------------------------------ccchhh----HHH
Confidence 8999999986420 112222222210 235677 458
Q ss_pred HHHHHHhh--cC-CcEEEEecCccccCCCCCCCcccccccccHH-HHHHh--hcCCceeeccCC---CceeeeeeHHHHH
Q 010075 239 EMLMQQSK--EN-LSLVIIRPTVVSGTYKEPFPGWVEDLKTINT-LFVAS--AQGNLRCLVGET---KVIMDVIPVDMVV 309 (519)
Q Consensus 239 E~lv~~~~--~~-lp~~IvRPs~V~g~~~~p~~gw~~~~~~~~~-~i~~~--~~g~~~~~~~~~---~~~~d~vpVDdva 309 (519)
|+++.++. .+ ++++|+||+.|||+...+... ..... ++..+ ..|....+++++ ....++++|||+|
T Consensus 158 E~~~~~~~~~~~~~~~~ilRp~~v~G~~~~~~~~-----~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~v~Dva 232 (364)
T 2v6g_A 158 EDIMLEEVEKKEGLTWSVHRPGNIFGFSPYSMMN-----LVGTLCVYAAICKHEGKVLRFTGCKAAWDGYSDCSDADLIA 232 (364)
T ss_dssp HHHHHHHHTTSTTCEEEEEEESSEECCCTTCSSC-----HHHHHHHHHHHHHHHTCCBCCCSCHHHHHSCBCCEEHHHHH
T ss_pred HHHHHHHhhcCCCceEEEECCCceeCCCCCcccc-----hHHHHHHHHHHHHhcCCceecCCCcccccccCCCCcHHHHH
Confidence 88888762 45 999999999999987642211 01111 23333 256655667776 4558899999999
Q ss_pred HHHHHHHHHhccCCCCCcEEEecCCCCCchhHHHHHHHH
Q 010075 310 NAMIVAMVAHAKQPSDANIYHVGSSLRNPVTLGLQVANT 348 (519)
Q Consensus 310 ~aii~a~~~~~~~~~~~~iyni~s~~~~~i~~~~~~~~~ 348 (519)
++++.++..... .+++||++++...++..+...+..
T Consensus 233 ~a~~~~~~~~~~---~g~~~ni~~~~~~s~~e~~~~i~~ 268 (364)
T 2v6g_A 233 EHHIWAAVDPYA---KNEAFNVSNGDVFKWKHFWKVLAE 268 (364)
T ss_dssp HHHHHHHHCGGG---TTEEEEECCSCCBCHHHHHHHHHH
T ss_pred HHHHHHHhCCCC---CCceEEecCCCcCCHHHHHHHHHH
Confidence 999999875322 257999999866665555555443
|
| >3oh8_A Nucleoside-diphosphate sugar epimerase (SULA FAMI; DUF1731_C, northeast structural genomics consortium, NESG, C PSI-biology; 2.00A {Corynebacterium glutamicum} | Back alignment and structure |
|---|
Probab=99.93 E-value=4.8e-25 Score=237.55 Aligned_cols=229 Identities=14% Similarity=0.080 Sum_probs=166.1
Q ss_pred CCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEEe
Q 010075 12 NKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVP 91 (519)
Q Consensus 12 ~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v~ 91 (519)
+|+|||||||||||++|++.|++.| .+|++++|+.... ..+.
T Consensus 147 ~m~VLVTGatG~IG~~l~~~L~~~G---~~V~~l~R~~~~~-----------------------------------~~v~ 188 (516)
T 3oh8_A 147 PLTVAITGSRGLVGRALTAQLQTGG---HEVIQLVRKEPKP-----------------------------------GKRF 188 (516)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTT---CEEEEEESSSCCT-----------------------------------TCEE
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCC---CEEEEEECCCCCc-----------------------------------ccee
Confidence 6899999999999999999999998 6899999986431 1256
Q ss_pred ccCCCCCCCCChhhhHHHHhcCccEEEEcCccCCc----cccHHHHHHHhHHHHHHHHHHHHhccCCceEEEEecceeec
Q 010075 92 GDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF----DERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAYVAG 167 (519)
Q Consensus 92 gDl~~~~lgls~~~~~~~l~~~vdiViH~Aa~v~f----~~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V~vSTa~v~~ 167 (519)
+|+.+. . ...++++|+|||+||.... .+.....+++|+.|+.++++++.+..++++|||+||+++|+
T Consensus 189 ~d~~~~-------~--~~~l~~~D~Vih~A~~~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~a~~~~~~r~V~~SS~~vyg 259 (516)
T 3oh8_A 189 WDPLNP-------A--SDLLDGADVLVHLAGEPIFGRFNDSHKEAIRESRVLPTKFLAELVAESTQCTTMISASAVGFYG 259 (516)
T ss_dssp CCTTSC-------C--TTTTTTCSEEEECCCC-----CCGGGHHHHHHHTHHHHHHHHHHHHHCSSCCEEEEEEEGGGGC
T ss_pred ecccch-------h--HHhcCCCCEEEECCCCccccccchhHHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEeCcceEec
Confidence 777632 1 1445789999999998632 34677789999999999999954445889999999999998
Q ss_pred CcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcHHHHHHHHHHHHHHHh-h
Q 010075 168 ERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLMQQS-K 246 (519)
Q Consensus 168 ~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~Y~~sK~~aE~lv~~~-~ 246 (519)
... ...++.|+.+ .+.+.|+.+|..+|.++... .
T Consensus 260 ~~~---~~~~~~E~~~------------------------------------------~~~~~y~~~~~~~E~~~~~~~~ 294 (516)
T 3oh8_A 260 HDR---GDEILTEESE------------------------------------------SGDDFLAEVCRDWEHATAPASD 294 (516)
T ss_dssp SEE---EEEEECTTSC------------------------------------------CCSSHHHHHHHHHHHTTHHHHH
T ss_pred CCC---CCCccCCCCC------------------------------------------CCcChHHHHHHHHHHHHHHHHh
Confidence 311 1122332222 24567999999999887655 5
Q ss_pred cCCcEEEEecCccccCCCCCCCcccccccccHHHHHHhhcCCceeeccCCCceeeeeeHHHHHHHHHHHHHHhccCCCCC
Q 010075 247 ENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMIVAMVAHAKQPSDA 326 (519)
Q Consensus 247 ~~lp~~IvRPs~V~g~~~~p~~gw~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~d~vpVDdva~aii~a~~~~~~~~~~~ 326 (519)
.+++++|+||+.|||+.. + ....++..+..|.. ...++++..+++|||+|+|++++.++.... ..
T Consensus 295 ~gi~~~ilRp~~v~Gp~~----~------~~~~~~~~~~~g~~-~~~g~g~~~~~~i~v~Dva~ai~~~l~~~~----~~ 359 (516)
T 3oh8_A 295 AGKRVAFIRTGVALSGRG----G------MLPLLKTLFSTGLG-GKFGDGTSWFSWIAIDDLTDIYYRAIVDAQ----IS 359 (516)
T ss_dssp TTCEEEEEEECEEEBTTB----S------HHHHHHHTTC---C-CCCTTSCCEECEEEHHHHHHHHHHHHHCTT----CC
T ss_pred CCCCEEEEEeeEEECCCC----C------hHHHHHHHHHhCCC-cccCCCCceEceEeHHHHHHHHHHHHhCcc----cC
Confidence 689999999999999863 1 12223333333433 356888999999999999999999987432 24
Q ss_pred cEEEecCCCCCchhHHHHHHH
Q 010075 327 NIYHVGSSLRNPVTLGLQVAN 347 (519)
Q Consensus 327 ~iyni~s~~~~~i~~~~~~~~ 347 (519)
.+||++++...++..+...+.
T Consensus 360 g~~ni~~~~~~s~~el~~~i~ 380 (516)
T 3oh8_A 360 GPINAVAPNPVSNADMTKILA 380 (516)
T ss_dssp EEEEESCSCCEEHHHHHHHTT
T ss_pred CcEEEECCCCCCHHHHHHHHH
Confidence 689999986655444444443
|
| >3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans} | Back alignment and structure |
|---|
Probab=99.93 E-value=5.4e-25 Score=212.51 Aligned_cols=210 Identities=17% Similarity=0.255 Sum_probs=157.4
Q ss_pred hhcCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCce
Q 010075 8 EFLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKI 87 (519)
Q Consensus 8 ~~~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v 87 (519)
..++||+|+|||||||||++++++|++.| .+|+++.|+.... +.+. ..++
T Consensus 17 ~~l~~~~ilVtGatG~iG~~l~~~L~~~G---~~V~~~~R~~~~~---~~~~------------------------~~~~ 66 (236)
T 3e8x_A 17 LYFQGMRVLVVGANGKVARYLLSELKNKG---HEPVAMVRNEEQG---PELR------------------------ERGA 66 (236)
T ss_dssp ----CCEEEEETTTSHHHHHHHHHHHHTT---CEEEEEESSGGGH---HHHH------------------------HTTC
T ss_pred cCcCCCeEEEECCCChHHHHHHHHHHhCC---CeEEEEECChHHH---HHHH------------------------hCCC
Confidence 44789999999999999999999999998 6889999975432 1121 1467
Q ss_pred -EEEeccCCCCCCCCChhhhHHHHhcCccEEEEcCccCCccccHHHHHHHhHHHHHHHHHHHHhccCCceEEEEecceee
Q 010075 88 -TFVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKFDERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAYVA 166 (519)
Q Consensus 88 -~~v~gDl~~~~lgls~~~~~~~l~~~vdiViH~Aa~v~f~~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V~vSTa~v~ 166 (519)
+++.+|++ . +. ...++++|+|||+||.... +.++..+++|+.|+.+++++|++. +.++||++||....
T Consensus 67 ~~~~~~Dl~-~-------~~-~~~~~~~D~vi~~ag~~~~-~~~~~~~~~n~~~~~~l~~a~~~~-~~~~iv~~SS~~~~ 135 (236)
T 3e8x_A 67 SDIVVANLE-E-------DF-SHAFASIDAVVFAAGSGPH-TGADKTILIDLWGAIKTIQEAEKR-GIKRFIMVSSVGTV 135 (236)
T ss_dssp SEEEECCTT-S-------CC-GGGGTTCSEEEECCCCCTT-SCHHHHHHTTTHHHHHHHHHHHHH-TCCEEEEECCTTCS
T ss_pred ceEEEcccH-H-------HH-HHHHcCCCEEEECCCCCCC-CCccccchhhHHHHHHHHHHHHHc-CCCEEEEEecCCCC
Confidence 89999998 1 12 2556789999999997653 568888999999999999999886 78999999995433
Q ss_pred cCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcHHHHHHHHHHHHHHHhh
Q 010075 167 GERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLMQQSK 246 (519)
Q Consensus 167 ~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~Y~~sK~~aE~lv~~~~ 246 (519)
.. |. .+ .+.+.|+.+|+.+|.+++.
T Consensus 136 ~~------~~-----~~------------------------------------------~~~~~Y~~sK~~~e~~~~~-- 160 (236)
T 3e8x_A 136 DP------DQ-----GP------------------------------------------MNMRHYLVAKRLADDELKR-- 160 (236)
T ss_dssp CG------GG-----SC------------------------------------------GGGHHHHHHHHHHHHHHHH--
T ss_pred CC------CC-----Ch------------------------------------------hhhhhHHHHHHHHHHHHHH--
Confidence 21 00 00 1246899999999999984
Q ss_pred cCCcEEEEecCccccCCCCCCCcccccccccHHHHHHhhcCCceeeccCCCceeeeeeHHHHHHHHHHHHHHhccCCCCC
Q 010075 247 ENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMIVAMVAHAKQPSDA 326 (519)
Q Consensus 247 ~~lp~~IvRPs~V~g~~~~p~~gw~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~d~vpVDdva~aii~a~~~~~~~~~~~ 326 (519)
.+++++++||+.|+|+... + .. ....++....++++++|+|++++.++..... .+
T Consensus 161 ~gi~~~~lrpg~v~~~~~~---~------------------~~-~~~~~~~~~~~~i~~~Dva~~~~~~~~~~~~---~g 215 (236)
T 3e8x_A 161 SSLDYTIVRPGPLSNEEST---G------------------KV-TVSPHFSEITRSITRHDVAKVIAELVDQQHT---IG 215 (236)
T ss_dssp SSSEEEEEEECSEECSCCC---S------------------EE-EEESSCSCCCCCEEHHHHHHHHHHHTTCGGG---TT
T ss_pred CCCCEEEEeCCcccCCCCC---C------------------eE-EeccCCCcccCcEeHHHHHHHHHHHhcCccc---cC
Confidence 7899999999999997542 1 11 1122444568899999999999999875432 36
Q ss_pred cEEEecCCCCCch
Q 010075 327 NIYHVGSSLRNPV 339 (519)
Q Consensus 327 ~iyni~s~~~~~i 339 (519)
++||++++ ..++
T Consensus 216 ~~~~v~~~-~~~~ 227 (236)
T 3e8x_A 216 KTFEVLNG-DTPI 227 (236)
T ss_dssp EEEEEEEC-SEEH
T ss_pred CeEEEeCC-CcCH
Confidence 89999887 3443
|
| >3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp} | Back alignment and structure |
|---|
Probab=99.93 E-value=3.2e-25 Score=211.67 Aligned_cols=206 Identities=15% Similarity=0.237 Sum_probs=158.1
Q ss_pred CEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEEec
Q 010075 13 KTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVPG 92 (519)
Q Consensus 13 k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v~g 92 (519)
|+|||||||||||++++++|++.| .+|+++.|+..... . ..+++++.+
T Consensus 1 M~ilItGatG~iG~~l~~~L~~~g---~~V~~~~R~~~~~~---------------------------~--~~~~~~~~~ 48 (219)
T 3dqp_A 1 MKIFIVGSTGRVGKSLLKSLSTTD---YQIYAGARKVEQVP---------------------------Q--YNNVKAVHF 48 (219)
T ss_dssp CEEEEESTTSHHHHHHHHHHTTSS---CEEEEEESSGGGSC---------------------------C--CTTEEEEEC
T ss_pred CeEEEECCCCHHHHHHHHHHHHCC---CEEEEEECCccchh---------------------------h--cCCceEEEe
Confidence 579999999999999999999988 68899999853221 0 157899999
Q ss_pred cCCCCCCCCChhhhHHHHhcCccEEEEcCccCCccccHHHHHHHhHHHHHHHHHHHHhccCCceEEEEecceeecCcCCe
Q 010075 93 DISSEDLGLKDSNLKEELWNELDIMVNSAAITKFDERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAYVAGERTGL 172 (519)
Q Consensus 93 Dl~~~~lgls~~~~~~~l~~~vdiViH~Aa~v~f~~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V~vSTa~v~~~~~~~ 172 (519)
|+++ ..+....+++++|+|||+||.... ..+++|+.|+.+++++|++. ++++||++||.+++....
T Consensus 49 D~~d------~~~~~~~~~~~~d~vi~~ag~~~~-----~~~~~n~~~~~~l~~a~~~~-~~~~iv~~SS~~~~~~~~-- 114 (219)
T 3dqp_A 49 DVDW------TPEEMAKQLHGMDAIINVSGSGGK-----SLLKVDLYGAVKLMQAAEKA-EVKRFILLSTIFSLQPEK-- 114 (219)
T ss_dssp CTTS------CHHHHHTTTTTCSEEEECCCCTTS-----SCCCCCCHHHHHHHHHHHHT-TCCEEEEECCTTTTCGGG--
T ss_pred cccC------CHHHHHHHHcCCCEEEECCcCCCC-----CcEeEeHHHHHHHHHHHHHh-CCCEEEEECcccccCCCc--
Confidence 9994 144556788899999999998652 25778999999999999986 789999999987765321
Q ss_pred eecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcHHHHHHHHHHHHHHHhhcCCcEE
Q 010075 173 ILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLMQQSKENLSLV 252 (519)
Q Consensus 173 i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~Y~~sK~~aE~lv~~~~~~lp~~ 252 (519)
+.| ++ ..+.+.|+.+|+.+|++++ ...+++++
T Consensus 115 -----~~e----~~--------------------------------------~~~~~~Y~~sK~~~e~~~~-~~~~i~~~ 146 (219)
T 3dqp_A 115 -----WIG----AG--------------------------------------FDALKDYYIAKHFADLYLT-KETNLDYT 146 (219)
T ss_dssp -----CCS----HH--------------------------------------HHHTHHHHHHHHHHHHHHH-HSCCCEEE
T ss_pred -----ccc----cc--------------------------------------cccccHHHHHHHHHHHHHH-hccCCcEE
Confidence 111 00 0245789999999999996 34789999
Q ss_pred EEecCccccCCCCCCCcccccccccHHHHHHhhcCCceeeccCCCceeeeeeHHHHHHHHHHHHHHhccCCCCCcEEEec
Q 010075 253 IIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMIVAMVAHAKQPSDANIYHVG 332 (519)
Q Consensus 253 IvRPs~V~g~~~~p~~gw~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~d~vpVDdva~aii~a~~~~~~~~~~~~iyni~ 332 (519)
++||+.++|+... +.. . . ++...++++++|+|++++.++..... .+++||++
T Consensus 147 ilrp~~v~g~~~~---~~~------------------~--~--~~~~~~~i~~~Dva~~i~~~l~~~~~---~g~~~~i~ 198 (219)
T 3dqp_A 147 IIQPGALTEEEAT---GLI------------------D--I--NDEVSASNTIGDVADTIKELVMTDHS---IGKVISMH 198 (219)
T ss_dssp EEEECSEECSCCC---SEE------------------E--E--SSSCCCCEEHHHHHHHHHHHHTCGGG---TTEEEEEE
T ss_pred EEeCceEecCCCC---Ccc------------------c--c--CCCcCCcccHHHHHHHHHHHHhCccc---cCcEEEeC
Confidence 9999999997542 110 0 1 25678999999999999999975432 26899998
Q ss_pred CCCCCchhH
Q 010075 333 SSLRNPVTL 341 (519)
Q Consensus 333 s~~~~~i~~ 341 (519)
++. .+++.
T Consensus 199 ~g~-~~~~e 206 (219)
T 3dqp_A 199 NGK-TAIKE 206 (219)
T ss_dssp ECS-EEHHH
T ss_pred CCC-ccHHH
Confidence 874 56544
|
| >3st7_A Capsular polysaccharide synthesis enzyme CAP5F; rossmann fold, cupid domain, short-chain dehydrogenase/reduc NADPH; 2.45A {Staphylococcus aureus} PDB: 2zkl_A 3vhr_A | Back alignment and structure |
|---|
Probab=99.92 E-value=5.2e-25 Score=226.94 Aligned_cols=210 Identities=16% Similarity=0.154 Sum_probs=158.8
Q ss_pred CEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEEec
Q 010075 13 KTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVPG 92 (519)
Q Consensus 13 k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v~g 92 (519)
|+|||||||||||++|+++|++.|. .+|++ +
T Consensus 1 M~VlVtGatG~iG~~l~~~L~~~g~--~~v~~-----------------------------------------------~ 31 (369)
T 3st7_A 1 MNIVITGAKGFVGKNLKADLTSTTD--HHIFE-----------------------------------------------V 31 (369)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHHCC--CEEEE-----------------------------------------------C
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCC--CEEEE-----------------------------------------------E
Confidence 5899999999999999999999873 14443 3
Q ss_pred cC-CCCCCCCChhhhHHHHhcCccEEEEcCccCCccccHHHHHHHhHHHHHHHHHHHHhccCCc-eEEEEecceeecCcC
Q 010075 93 DI-SSEDLGLKDSNLKEELWNELDIMVNSAAITKFDERYDVAFGINTLGVIHLVNFAKKCVKLK-VFVHVSTAYVAGERT 170 (519)
Q Consensus 93 Dl-~~~~lgls~~~~~~~l~~~vdiViH~Aa~v~f~~~~~~~~~~Nv~gt~~ll~~a~~~~~l~-~~V~vSTa~v~~~~~ 170 (519)
|. . +.+....+++++|+|||+||.... ++....+++|+.++.+++++|++. +.+ +|||+||.++++
T Consensus 32 d~~~-------d~~~l~~~~~~~d~Vih~a~~~~~-~~~~~~~~~n~~~~~~l~~a~~~~-~~~~~~v~~Ss~~~~~--- 99 (369)
T 3st7_A 32 HRQT-------KEEELESALLKADFIVHLAGVNRP-EHDKEFSLGNVSYLDHVLDILTRN-TKKPAILLSSSIQATQ--- 99 (369)
T ss_dssp CTTC-------CHHHHHHHHHHCSEEEECCCSBCT-TCSTTCSSSCCBHHHHHHHHHTTC-SSCCEEEEEEEGGGGS---
T ss_pred CCCC-------CHHHHHHHhccCCEEEECCcCCCC-CCHHHHHHHHHHHHHHHHHHHHHh-CCCCeEEEeCchhhcC---
Confidence 44 3 333344667789999999998764 344556889999999999999986 565 999999998764
Q ss_pred CeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcHHHHHHHHHHHHHHHh--hcC
Q 010075 171 GLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLMQQS--KEN 248 (519)
Q Consensus 171 ~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~Y~~sK~~aE~lv~~~--~~~ 248 (519)
.+.|+.+|+.+|++++++ ..+
T Consensus 100 ---------------------------------------------------------~~~Y~~sK~~~E~~~~~~~~~~g 122 (369)
T 3st7_A 100 ---------------------------------------------------------DNPYGESKLQGEQLLREYAEEYG 122 (369)
T ss_dssp ---------------------------------------------------------CSHHHHHHHHHHHHHHHHHHHHC
T ss_pred ---------------------------------------------------------CCCchHHHHHHHHHHHHHHHHhC
Confidence 257999999999999987 358
Q ss_pred CcEEEEecCccccCCCCCCCcccccccccHHHHHHhhcCCceeeccCCCceeeeeeHHHHHHHHHHHHHHhccCCCCCcE
Q 010075 249 LSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMIVAMVAHAKQPSDANI 328 (519)
Q Consensus 249 lp~~IvRPs~V~g~~~~p~~gw~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~d~vpVDdva~aii~a~~~~~~~~~~~~i 328 (519)
++++|+||+.|||++..|.. -.....++..+..|....+ ++++..++++|+||+|++++.++...... .+++
T Consensus 123 ~~~~i~R~~~v~G~~~~~~~-----~~~~~~~~~~~~~~~~~~~-~~~~~~~~~i~v~Dva~~~~~~l~~~~~~--~~~~ 194 (369)
T 3st7_A 123 NTVYIYRWPNLFGKWCKPNY-----NSVIATFCYKIARNEEIQV-NDRNVELTLNYVDDIVAEIKRAIEGTPTI--ENGV 194 (369)
T ss_dssp CCEEEEEECEEECTTCCTTS-----SCHHHHHHHHHHTTCCCCC-SCTTCEEEEEEHHHHHHHHHHHHHTCCCE--ETTE
T ss_pred CCEEEEECCceeCCCCCCCc-----chHHHHHHHHHHcCCCeEe-cCCCeEEEEEEHHHHHHHHHHHHhCCccc--CCce
Confidence 99999999999999875421 0233445556666665444 57889999999999999999999754321 1579
Q ss_pred EEecCCCCCchhHHHHHHHH
Q 010075 329 YHVGSSLRNPVTLGLQVANT 348 (519)
Q Consensus 329 yni~s~~~~~i~~~~~~~~~ 348 (519)
||++++...++..+...+..
T Consensus 195 ~~i~~~~~~s~~e~~~~~~~ 214 (369)
T 3st7_A 195 PTVPNVFKVTLGEIVDLLYK 214 (369)
T ss_dssp ECCSCCEEEEHHHHHHHHHH
T ss_pred EEeCCCCceeHHHHHHHHHH
Confidence 99998855444334444433
|
| >3ay3_A NAD-dependent epimerase/dehydratase; glucuronic acid dehydrogeanse, oxidoreductase; 2.10A {Chromohalobacter salexigens} | Back alignment and structure |
|---|
Probab=99.92 E-value=1.4e-24 Score=213.57 Aligned_cols=204 Identities=17% Similarity=0.172 Sum_probs=157.5
Q ss_pred CEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEEec
Q 010075 13 KTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVPG 92 (519)
Q Consensus 13 k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v~g 92 (519)
|+|||||||||||++|+++|++.| .+|+++.|+..... ..++.++.+
T Consensus 3 ~~ilVtGatG~iG~~l~~~L~~~g---~~V~~~~r~~~~~~------------------------------~~~~~~~~~ 49 (267)
T 3ay3_A 3 NRLLVTGAAGGVGSAIRPHLGTLA---HEVRLSDIVDLGAA------------------------------EAHEEIVAC 49 (267)
T ss_dssp EEEEEESTTSHHHHHHGGGGGGTE---EEEEECCSSCCCCC------------------------------CTTEEECCC
T ss_pred ceEEEECCCCHHHHHHHHHHHhCC---CEEEEEeCCCcccc------------------------------CCCccEEEc
Confidence 689999999999999999999987 68999999764310 135788999
Q ss_pred cCCCCCCCCChhhhHHHHhcCccEEEEcCccCCccccHHHHHHHhHHHHHHHHHHHHhccCCceEEEEecceeecCcCCe
Q 010075 93 DISSEDLGLKDSNLKEELWNELDIMVNSAAITKFDERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAYVAGERTGL 172 (519)
Q Consensus 93 Dl~~~~lgls~~~~~~~l~~~vdiViH~Aa~v~f~~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V~vSTa~v~~~~~~~ 172 (519)
|+++ .+....+++++|+|||+|+.. ..++++..+++|+.|+.+++++|++. ++++|||+||..+++....
T Consensus 50 Dl~d-------~~~~~~~~~~~d~vi~~a~~~-~~~~~~~~~~~n~~~~~~l~~a~~~~-~~~~iv~~SS~~~~~~~~~- 119 (267)
T 3ay3_A 50 DLAD-------AQAVHDLVKDCDGIIHLGGVS-VERPWNDILQANIIGAYNLYEAARNL-GKPRIVFASSNHTIGYYPR- 119 (267)
T ss_dssp CTTC-------HHHHHHHHTTCSEEEECCSCC-SCCCHHHHHHHTHHHHHHHHHHHHHT-TCCEEEEEEEGGGSTTSBT-
T ss_pred cCCC-------HHHHHHHHcCCCEEEECCcCC-CCCCHHHHHHHHHHHHHHHHHHHHHh-CCCEEEEeCCHHHhCCCCC-
Confidence 9994 444457788999999999976 34567888999999999999999985 7899999999999875321
Q ss_pred eecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcHHHHHHHHHHHHHHHh--hcCCc
Q 010075 173 ILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLMQQS--KENLS 250 (519)
Q Consensus 173 i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~Y~~sK~~aE~lv~~~--~~~lp 250 (519)
+.+++|+.+. .+.+.|+.||+.+|.+++.+ ..+++
T Consensus 120 --~~~~~E~~~~-----------------------------------------~~~~~Y~~sK~~~e~~~~~~~~~~gi~ 156 (267)
T 3ay3_A 120 --TTRIDTEVPR-----------------------------------------RPDSLYGLSKCFGEDLASLYYHKFDIE 156 (267)
T ss_dssp --TSCBCTTSCC-----------------------------------------CCCSHHHHHHHHHHHHHHHHHHTTCCC
T ss_pred --CCCCCCCCCC-----------------------------------------CCCChHHHHHHHHHHHHHHHHHHcCCC
Confidence 1222222221 34678999999999999876 45899
Q ss_pred EEEEecCccccCCCCCCCcccccccccHHHHHHhhcCCceeeccCCCceeeeeeHHHHHHHHHHHHHHhccCCCCCcEEE
Q 010075 251 LVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMIVAMVAHAKQPSDANIYH 330 (519)
Q Consensus 251 ~~IvRPs~V~g~~~~p~~gw~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~d~vpVDdva~aii~a~~~~~~~~~~~~iyn 330 (519)
++++||+.||+. |. +++...++++++|+|++++.++..... ...+||
T Consensus 157 ~~~lrp~~v~~~---~~---------------------------~~~~~~~~~~~~dva~~~~~~~~~~~~---~~~~~~ 203 (267)
T 3ay3_A 157 TLNIRIGSCFPK---PK---------------------------DARMMATWLSVDDFMRLMKRAFVAPKL---GCTVVY 203 (267)
T ss_dssp EEEEEECBCSSS---CC---------------------------SHHHHHHBCCHHHHHHHHHHHHHSSCC---CEEEEE
T ss_pred EEEEeceeecCC---CC---------------------------CCCeeeccccHHHHHHHHHHHHhCCCC---CceeEe
Confidence 999999999842 10 112356789999999999998874321 146889
Q ss_pred ecCCC
Q 010075 331 VGSSL 335 (519)
Q Consensus 331 i~s~~ 335 (519)
+.++.
T Consensus 204 ~~~~~ 208 (267)
T 3ay3_A 204 GASAN 208 (267)
T ss_dssp ECCSC
T ss_pred cCCCc
Confidence 87764
|
| >2ggs_A 273AA long hypothetical DTDP-4-dehydrorhamnose reductase; alpha, beta, oxidoreductase; HET: NDP; 1.70A {Sulfolobus tokodaii} | Back alignment and structure |
|---|
Probab=99.92 E-value=8.2e-24 Score=208.11 Aligned_cols=216 Identities=20% Similarity=0.213 Sum_probs=159.6
Q ss_pred CEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEEec
Q 010075 13 KTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVPG 92 (519)
Q Consensus 13 k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v~g 92 (519)
|+|||||||||||++++++|++ + .+|+++.|+.... .+ +.+
T Consensus 1 m~ilVtGatG~iG~~l~~~L~~-g---~~V~~~~r~~~~~--------------------------------~~---~~~ 41 (273)
T 2ggs_A 1 MRTLITGASGQLGIELSRLLSE-R---HEVIKVYNSSEIQ--------------------------------GG---YKL 41 (273)
T ss_dssp CCEEEETTTSHHHHHHHHHHTT-T---SCEEEEESSSCCT--------------------------------TC---EEC
T ss_pred CEEEEECCCChhHHHHHHHHhc-C---CeEEEecCCCcCC--------------------------------CC---cee
Confidence 4799999999999999999995 6 6789999975310 11 789
Q ss_pred cCCCCCCCCChhhhHHHHhcC--ccEEEEcCccCCcc---ccHHHHHHHhHHHHHHHHHHHHhccCCceEEEEecceeec
Q 010075 93 DISSEDLGLKDSNLKEELWNE--LDIMVNSAAITKFD---ERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAYVAG 167 (519)
Q Consensus 93 Dl~~~~lgls~~~~~~~l~~~--vdiViH~Aa~v~f~---~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V~vSTa~v~~ 167 (519)
|+++ .+....++++ +|+|||+||..... ++++..+++|+.|+.+++++|++. +. +|||+||..+++
T Consensus 42 Dl~~-------~~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~-~iv~~SS~~~~~ 112 (273)
T 2ggs_A 42 DLTD-------FPRLEDFIIKKRPDVIINAAAMTDVDKCEIEKEKAYKINAEAVRHIVRAGKVI-DS-YIVHISTDYVFD 112 (273)
T ss_dssp CTTS-------HHHHHHHHHHHCCSEEEECCCCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHT-TC-EEEEEEEGGGSC
T ss_pred ccCC-------HHHHHHHHHhcCCCEEEECCcccChhhhhhCHHHHHHHhHHHHHHHHHHHHHh-CC-eEEEEecceeEc
Confidence 9995 3334455554 99999999987643 577888999999999999999985 54 899999999987
Q ss_pred CcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcHHHHHHHHHHHHHHHhhc
Q 010075 168 ERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLMQQSKE 247 (519)
Q Consensus 168 ~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~Y~~sK~~aE~lv~~~~~ 247 (519)
...+.++|. .+. .+.+.|+.||+.+|.+++.
T Consensus 113 ~~~~~~~e~-----~~~-----------------------------------------~~~~~Y~~sK~~~e~~~~~--- 143 (273)
T 2ggs_A 113 GEKGNYKEE-----DIP-----------------------------------------NPINYYGLSKLLGETFALQ--- 143 (273)
T ss_dssp SSSCSBCTT-----SCC-----------------------------------------CCSSHHHHHHHHHHHHHCC---
T ss_pred CCCCCcCCC-----CCC-----------------------------------------CCCCHHHHHHHHHHHHHhC---
Confidence 654333332 211 3467899999999999876
Q ss_pred CCcEEEEecCccccCCCCCCCcccccccccHHHHHHhhcCCceeeccCCCceeeeeeHHHHHHHHHHHHHHhccCCCCCc
Q 010075 248 NLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMIVAMVAHAKQPSDAN 327 (519)
Q Consensus 248 ~lp~~IvRPs~V~g~~~~p~~gw~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~d~vpVDdva~aii~a~~~~~~~~~~~~ 327 (519)
++++++||+.|+|+ . + ....++.....|....+.++ ..++++++|+|++++.++.... .+
T Consensus 144 -~~~~~iR~~~v~G~--~---~------~~~~~~~~~~~~~~~~~~~~---~~~~~~~~dva~~i~~~~~~~~-----~g 203 (273)
T 2ggs_A 144 -DDSLIIRTSGIFRN--K---G------FPIYVYKTLKEGKTVFAFKG---YYSPISARKLASAILELLELRK-----TG 203 (273)
T ss_dssp -TTCEEEEECCCBSS--S---S------HHHHHHHHHHTTCCEEEESC---EECCCBHHHHHHHHHHHHHHTC-----CE
T ss_pred -CCeEEEeccccccc--c---H------HHHHHHHHHHcCCCEEeecC---CCCceEHHHHHHHHHHHHhcCc-----CC
Confidence 78899999999982 1 1 12223344455655444443 7899999999999999987532 35
Q ss_pred EEEecCCCCCchhHHHHHH
Q 010075 328 IYHVGSSLRNPVTLGLQVA 346 (519)
Q Consensus 328 iyni~s~~~~~i~~~~~~~ 346 (519)
+||+++ ...++..+...+
T Consensus 204 ~~~i~~-~~~s~~e~~~~~ 221 (273)
T 2ggs_A 204 IIHVAG-ERISRFELALKI 221 (273)
T ss_dssp EEECCC-CCEEHHHHHHHH
T ss_pred eEEECC-CcccHHHHHHHH
Confidence 999988 655544444444
|
| >2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D | Back alignment and structure |
|---|
Probab=99.92 E-value=6.4e-24 Score=210.60 Aligned_cols=213 Identities=12% Similarity=0.191 Sum_probs=158.6
Q ss_pred CEEEEeCCccHHHHHHHHHHHHh--CCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEE
Q 010075 13 KTILVSGVTGFVAKVFIEKILRV--QPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFV 90 (519)
Q Consensus 13 k~VlITGaTGFlG~~Lv~~LL~~--g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v 90 (519)
|+|||||||||||+++++.|++. | .+|+++.|+..... .+. ..+++++
T Consensus 1 ~~ilVtGatG~iG~~l~~~L~~~~~g---~~V~~~~r~~~~~~---~l~------------------------~~~~~~~ 50 (287)
T 2jl1_A 1 FSIAVTGATGQLGGLVIQHLLKKVPA---SQIIAIVRNVEKAS---TLA------------------------DQGVEVR 50 (287)
T ss_dssp CCEEETTTTSHHHHHHHHHHTTTSCG---GGEEEEESCTTTTH---HHH------------------------HTTCEEE
T ss_pred CeEEEEcCCchHHHHHHHHHHHhCCC---CeEEEEEcCHHHHh---HHh------------------------hcCCeEE
Confidence 57999999999999999999998 6 67899999764321 111 1467899
Q ss_pred eccCCCCCCCCChhhhHHHHhcCccEEEEcCccCCccccHHHHHHHhHHHHHHHHHHHHhccCCceEEEEecceeecCcC
Q 010075 91 PGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKFDERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAYVAGERT 170 (519)
Q Consensus 91 ~gDl~~~~lgls~~~~~~~l~~~vdiViH~Aa~v~f~~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V~vSTa~v~~~~~ 170 (519)
.+|+++ .+....+++++|+|||+|+.. ..+ ++|+.++.+++++|++. ++++|||+||.+++.
T Consensus 51 ~~D~~d-------~~~l~~~~~~~d~vi~~a~~~-~~~------~~n~~~~~~l~~a~~~~-~~~~~v~~Ss~~~~~--- 112 (287)
T 2jl1_A 51 HGDYNQ-------PESLQKAFAGVSKLLFISGPH-YDN------TLLIVQHANVVKAARDA-GVKHIAYTGYAFAEE--- 112 (287)
T ss_dssp ECCTTC-------HHHHHHHTTTCSEEEECCCCC-SCH------HHHHHHHHHHHHHHHHT-TCSEEEEEEETTGGG---
T ss_pred EeccCC-------HHHHHHHHhcCCEEEEcCCCC-cCc------hHHHHHHHHHHHHHHHc-CCCEEEEECCCCCCC---
Confidence 999995 344457788999999999963 211 67999999999999986 889999999987642
Q ss_pred CeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcHHHHHHHHHHHHHHHhhcCCc
Q 010075 171 GLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLMQQSKENLS 250 (519)
Q Consensus 171 ~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~Y~~sK~~aE~lv~~~~~~lp 250 (519)
.+..|+.+|..+|+++++ .+++
T Consensus 113 --------------------------------------------------------~~~~y~~~K~~~E~~~~~--~~~~ 134 (287)
T 2jl1_A 113 --------------------------------------------------------SIIPLAHVHLATEYAIRT--TNIP 134 (287)
T ss_dssp --------------------------------------------------------CCSTHHHHHHHHHHHHHH--TTCC
T ss_pred --------------------------------------------------------CCCchHHHHHHHHHHHHH--cCCC
Confidence 023699999999999986 6899
Q ss_pred EEEEecCccccCCCCCCCcccccccccHHHHHHhhcCCceeeccCCCceeeeeeHHHHHHHHHHHHHHhccCCCCCcEEE
Q 010075 251 LVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMIVAMVAHAKQPSDANIYH 330 (519)
Q Consensus 251 ~~IvRPs~V~g~~~~p~~gw~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~d~vpVDdva~aii~a~~~~~~~~~~~~iyn 330 (519)
++++||+.++|+.. +.+. .. ....|... .+.++...++++++|+|++++.++.... ..+++||
T Consensus 135 ~~ilrp~~~~~~~~---~~~~------~~---~~~~~~~~--~~~~~~~~~~i~~~Dva~~~~~~~~~~~---~~g~~~~ 197 (287)
T 2jl1_A 135 YTFLRNALYTDFFV---NEGL------RA---STESGAIV--TNAGSGIVNSVTRNELALAAATVLTEEG---HENKTYN 197 (287)
T ss_dssp EEEEEECCBHHHHS---SGGG------HH---HHHHTEEE--ESCTTCCBCCBCHHHHHHHHHHHHTSSS---CTTEEEE
T ss_pred eEEEECCEeccccc---hhhH------HH---HhhCCcee--ccCCCCccCccCHHHHHHHHHHHhcCCC---CCCcEEE
Confidence 99999999887531 1111 11 11234332 3456778899999999999999886422 1368999
Q ss_pred ecCCCCCchhHHHHHHHH
Q 010075 331 VGSSLRNPVTLGLQVANT 348 (519)
Q Consensus 331 i~s~~~~~i~~~~~~~~~ 348 (519)
++++...++..+...+..
T Consensus 198 i~~~~~~s~~e~~~~i~~ 215 (287)
T 2jl1_A 198 LVSNQPWTFDELAQILSE 215 (287)
T ss_dssp ECCSSCBCHHHHHHHHHH
T ss_pred ecCCCcCCHHHHHHHHHH
Confidence 999866665555555443
|
| >3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334} | Back alignment and structure |
|---|
Probab=99.91 E-value=4.6e-24 Score=203.77 Aligned_cols=216 Identities=12% Similarity=-0.017 Sum_probs=149.5
Q ss_pred CEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEEec
Q 010075 13 KTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVPG 92 (519)
Q Consensus 13 k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v~g 92 (519)
|+|||||||||||++++++|++.| .+|++++|+.... +.+ ...+++++.+
T Consensus 1 MkilVtGatG~iG~~l~~~L~~~g---~~V~~~~R~~~~~---~~~------------------------~~~~~~~~~~ 50 (224)
T 3h2s_A 1 MKIAVLGATGRAGSAIVAEARRRG---HEVLAVVRDPQKA---ADR------------------------LGATVATLVK 50 (224)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTT---CEEEEEESCHHHH---HHH------------------------TCTTSEEEEC
T ss_pred CEEEEEcCCCHHHHHHHHHHHHCC---CEEEEEEeccccc---ccc------------------------cCCCceEEec
Confidence 579999999999999999999998 6889999974221 111 1257899999
Q ss_pred cCCCCCCCCChhhhHHHHhcCccEEEEcCccCCccccHHHHHHHhHHHHHHHHHHHHhccCCceEEEEecceeecCcCCe
Q 010075 93 DISSEDLGLKDSNLKEELWNELDIMVNSAAITKFDERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAYVAGERTGL 172 (519)
Q Consensus 93 Dl~~~~lgls~~~~~~~l~~~vdiViH~Aa~v~f~~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V~vSTa~v~~~~~~~ 172 (519)
|+++++ . ..++++|+|||+||...... ...+|+.++++++++|++. + ++||++||+.++....+.
T Consensus 51 D~~d~~-------~--~~~~~~d~vi~~ag~~~~~~----~~~~n~~~~~~l~~a~~~~-~-~~~v~~SS~~~~~~~~~~ 115 (224)
T 3h2s_A 51 EPLVLT-------E--ADLDSVDAVVDALSVPWGSG----RGYLHLDFATHLVSLLRNS-D-TLAVFILGSASLAMPGAD 115 (224)
T ss_dssp CGGGCC-------H--HHHTTCSEEEECCCCCTTSS----CTHHHHHHHHHHHHTCTTC-C-CEEEEECCGGGSBCTTCS
T ss_pred cccccc-------H--hhcccCCEEEECCccCCCcc----hhhHHHHHHHHHHHHHHHc-C-CcEEEEecceeeccCCCC
Confidence 999643 2 45678999999999862212 2467999999999999986 5 999999998655432210
Q ss_pred eecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcHHHHHHHHHHHHHHHh-hcCCcE
Q 010075 173 ILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLMQQS-KENLSL 251 (519)
Q Consensus 173 i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~Y~~sK~~aE~lv~~~-~~~lp~ 251 (519)
....+.+.. ...+.+.|+.+|+.+|.+.... ..++++
T Consensus 116 -~~~~~~~~~-----------------------------------------~~~~~~~y~~sK~~~e~~~~~~~~~~i~~ 153 (224)
T 3h2s_A 116 -HPMILDFPE-----------------------------------------SAASQPWYDGALYQYYEYQFLQMNANVNW 153 (224)
T ss_dssp -SCGGGGCCG-----------------------------------------GGGGSTTHHHHHHHHHHHHHHTTCTTSCE
T ss_pred -ccccccCCC-----------------------------------------CCccchhhHHHHHHHHHHHHHHhcCCCcE
Confidence 000110000 0023567999999999653333 568999
Q ss_pred EEEecCccccCCCCCCCcccccccccHHHHHHhhcCCceeeccCCCceeeeeeHHHHHHHHHHHHHHhccCCCCCcEEEe
Q 010075 252 VIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMIVAMVAHAKQPSDANIYHV 331 (519)
Q Consensus 252 ~IvRPs~V~g~~~~p~~gw~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~d~vpVDdva~aii~a~~~~~~~~~~~~iyni 331 (519)
+++||+.++|+.. ..++... .. .+ ..+....++++++|+|++++.++..... .+++|++
T Consensus 154 ~ivrp~~v~g~~~--~~~~~~~------------~~---~~-~~~~~~~~~i~~~DvA~~~~~~l~~~~~---~g~~~~~ 212 (224)
T 3h2s_A 154 IGISPSEAFPSGP--ATSYVAG------------KD---TL-LVGEDGQSHITTGNMALAILDQLEHPTA---IRDRIVV 212 (224)
T ss_dssp EEEEECSBCCCCC--CCCEEEE------------SS---BC-CCCTTSCCBCCHHHHHHHHHHHHHSCCC---TTSEEEE
T ss_pred EEEcCccccCCCc--ccCceec------------cc---cc-ccCCCCCceEeHHHHHHHHHHHhcCccc---cCCEEEE
Confidence 9999999999833 2222211 01 11 1123456899999999999999975332 3689999
Q ss_pred cCCCC
Q 010075 332 GSSLR 336 (519)
Q Consensus 332 ~s~~~ 336 (519)
++...
T Consensus 213 ~~~~~ 217 (224)
T 3h2s_A 213 RDADL 217 (224)
T ss_dssp EECC-
T ss_pred ecCcc
Confidence 87643
|
| >2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A | Back alignment and structure |
|---|
Probab=99.91 E-value=3.1e-23 Score=200.56 Aligned_cols=211 Identities=17% Similarity=0.120 Sum_probs=154.3
Q ss_pred cCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 010075 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (519)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (519)
+++|+|+|||||||||++++++|++.|.. .+|+++.|+....... ...++.+
T Consensus 16 m~~~~vlVtGasg~iG~~l~~~L~~~G~~-~~V~~~~r~~~~~~~~---------------------------~~~~~~~ 67 (242)
T 2bka_A 16 MQNKSVFILGASGETGRVLLKEILEQGLF-SKVTLIGRRKLTFDEE---------------------------AYKNVNQ 67 (242)
T ss_dssp HTCCEEEEECTTSHHHHHHHHHHHHHTCC-SEEEEEESSCCCCCSG---------------------------GGGGCEE
T ss_pred hcCCeEEEECCCcHHHHHHHHHHHcCCCC-CEEEEEEcCCCCcccc---------------------------ccCCceE
Confidence 67899999999999999999999999831 1889999986432110 0146789
Q ss_pred EeccCCCCCCCCChhhhHHHHhcCccEEEEcCccCCccccHHHHHHHhHHHHHHHHHHHHhccCCceEEEEecceeecCc
Q 010075 90 VPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKFDERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAYVAGER 169 (519)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~~~vdiViH~Aa~v~f~~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V~vSTa~v~~~~ 169 (519)
+.+|+++ .+....+++++|+|||+||........+..+++|+.|+.++++++++. +.++||++||..+++.
T Consensus 68 ~~~D~~d-------~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~n~~~~~~~~~~~~~~-~~~~iv~~SS~~~~~~- 138 (242)
T 2bka_A 68 EVVDFEK-------LDDYASAFQGHDVGFCCLGTTRGKAGAEGFVRVDRDYVLKSAELAKAG-GCKHFNLLSSKGADKS- 138 (242)
T ss_dssp EECCGGG-------GGGGGGGGSSCSEEEECCCCCHHHHHHHHHHHHHTHHHHHHHHHHHHT-TCCEEEEECCTTCCTT-
T ss_pred EecCcCC-------HHHHHHHhcCCCEEEECCCcccccCCcccceeeeHHHHHHHHHHHHHC-CCCEEEEEccCcCCCC-
Confidence 9999995 333346778999999999986555566788999999999999999885 7889999999977642
Q ss_pred CCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcHHHHHHHHHHHHHHHhhcCC
Q 010075 170 TGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLMQQSKENL 249 (519)
Q Consensus 170 ~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~Y~~sK~~aE~lv~~~~~~l 249 (519)
+.+.|+.+|+.+|.+++.. ++
T Consensus 139 ---------------------------------------------------------~~~~Y~~sK~~~e~~~~~~--~~ 159 (242)
T 2bka_A 139 ---------------------------------------------------------SNFLYLQVKGEVEAKVEEL--KF 159 (242)
T ss_dssp ---------------------------------------------------------CSSHHHHHHHHHHHHHHTT--CC
T ss_pred ---------------------------------------------------------CcchHHHHHHHHHHHHHhc--CC
Confidence 2357999999999999874 67
Q ss_pred -cEEEEecCccccCCCCCCCcccccccccHHHHHHhhcCCceeeccCCCceeeeeeHHHHHHHHHHHHHHhccCCCCCcE
Q 010075 250 -SLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMIVAMVAHAKQPSDANI 328 (519)
Q Consensus 250 -p~~IvRPs~V~g~~~~p~~gw~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~d~vpVDdva~aii~a~~~~~~~~~~~~i 328 (519)
+++++||+.|+|+...+. ....+..... +..+...+ ...+++++|+|++++.++..... ..+
T Consensus 160 ~~~~~vrpg~v~~~~~~~~--------~~~~~~~~~~-~~~~~~~~----~~~~~~~~dva~~~~~~~~~~~~----~~~ 222 (242)
T 2bka_A 160 DRYSVFRPGVLLCDRQESR--------PGEWLVRKFF-GSLPDSWA----SGHSVPVVTVVRAMLNNVVRPRD----KQM 222 (242)
T ss_dssp SEEEEEECCEEECTTGGGS--------HHHHHHHHHH-CSCCTTGG----GGTEEEHHHHHHHHHHHHTSCCC----SSE
T ss_pred CCeEEEcCceecCCCCCCc--------HHHHHHHHhh-cccCcccc----CCcccCHHHHHHHHHHHHhCccc----cCe
Confidence 599999999999865321 0111111111 11111111 23589999999999999864321 346
Q ss_pred EEecC
Q 010075 329 YHVGS 333 (519)
Q Consensus 329 yni~s 333 (519)
|++.+
T Consensus 223 ~~~~~ 227 (242)
T 2bka_A 223 ELLEN 227 (242)
T ss_dssp EEEEH
T ss_pred eEeeH
Confidence 76654
|
| >2a35_A Hypothetical protein PA4017; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.90 E-value=4.5e-24 Score=202.39 Aligned_cols=201 Identities=16% Similarity=0.113 Sum_probs=152.6
Q ss_pred CCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEE
Q 010075 11 ENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFV 90 (519)
Q Consensus 11 ~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v 90 (519)
.+|+|+|||||||||++++++|++.++ ..+|+++.|+.... ..+++++
T Consensus 4 ~~~~vlVtGatG~iG~~l~~~l~~~g~-~~~V~~~~r~~~~~-------------------------------~~~~~~~ 51 (215)
T 2a35_A 4 TPKRVLLAGATGLTGEHLLDRILSEPT-LAKVIAPARKALAE-------------------------------HPRLDNP 51 (215)
T ss_dssp CCCEEEEECTTSHHHHHHHHHHHHCTT-CCEEECCBSSCCCC-------------------------------CTTEECC
T ss_pred CCceEEEECCCcHHHHHHHHHHHhCCC-CCeEEEEeCCCccc-------------------------------CCCceEE
Confidence 368999999999999999999999873 12889999976431 2467888
Q ss_pred eccCCCCCCCCChhhhHHHHhcCccEEEEcCccCCc-cccHHHHHHHhHHHHHHHHHHHHhccCCceEEEEecceeecCc
Q 010075 91 PGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF-DERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAYVAGER 169 (519)
Q Consensus 91 ~gDl~~~~lgls~~~~~~~l~~~vdiViH~Aa~v~f-~~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V~vSTa~v~~~~ 169 (519)
.+|+++ .+....++ +|+|||+|+.... .++.+..+++|+.++.+++++|++. +.++||++||..+++.
T Consensus 52 ~~D~~~-------~~~~~~~~--~d~vi~~a~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~~v~~Ss~~~~~~- 120 (215)
T 2a35_A 52 VGPLAE-------LLPQLDGS--IDTAFCCLGTTIKEAGSEEAFRAVDFDLPLAVGKRALEM-GARHYLVVSALGADAK- 120 (215)
T ss_dssp BSCHHH-------HGGGCCSC--CSEEEECCCCCHHHHSSHHHHHHHHTHHHHHHHHHHHHT-TCCEEEEECCTTCCTT-
T ss_pred eccccC-------HHHHHHhh--hcEEEECeeeccccCCCHHHHHHhhHHHHHHHHHHHHHc-CCCEEEEECCcccCCC-
Confidence 999984 33222334 9999999997643 3567888999999999999999986 7889999999887642
Q ss_pred CCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcHHHHHHHHHHHHHHHhhcCC
Q 010075 170 TGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLMQQSKENL 249 (519)
Q Consensus 170 ~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~Y~~sK~~aE~lv~~~~~~l 249 (519)
+.+.|+.+|+.+|++++. .++
T Consensus 121 ---------------------------------------------------------~~~~y~~sK~~~e~~~~~--~~~ 141 (215)
T 2a35_A 121 ---------------------------------------------------------SSIFYNRVKGELEQALQE--QGW 141 (215)
T ss_dssp ---------------------------------------------------------CSSHHHHHHHHHHHHHTT--SCC
T ss_pred ---------------------------------------------------------CccHHHHHHHHHHHHHHH--cCC
Confidence 246799999999999987 489
Q ss_pred c-EEEEecCccccCCCCCCCcccccccccHHHHHHhhcCCceeeccCCCceeeeeeHHHHHHHHHHHHHHhccCCCCCcE
Q 010075 250 S-LVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMIVAMVAHAKQPSDANI 328 (519)
Q Consensus 250 p-~~IvRPs~V~g~~~~p~~gw~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~d~vpVDdva~aii~a~~~~~~~~~~~~i 328 (519)
+ ++++||+.++|+... +.+...+ . +....+ ++ ...++++++|+|++++.++... .+++
T Consensus 142 ~~~~~vrp~~v~g~~~~--~~~~~~~----------~-~~~~~~-~~--~~~~~i~~~Dva~~~~~~~~~~-----~~~~ 200 (215)
T 2a35_A 142 PQLTIARPSLLFGPREE--FRLAEIL----------A-APIARI-LP--GKYHGIEACDLARALWRLALEE-----GKGV 200 (215)
T ss_dssp SEEEEEECCSEESTTSC--EEGGGGT----------T-CCCC-------CHHHHHHHHHHHHHHHHHHTCC-----CSEE
T ss_pred CeEEEEeCceeeCCCCc--chHHHHH----------H-Hhhhhc-cC--CCcCcEeHHHHHHHHHHHHhcC-----CCCc
Confidence 9 999999999998653 1222211 1 111111 22 2678999999999999998632 1579
Q ss_pred EEecCC
Q 010075 329 YHVGSS 334 (519)
Q Consensus 329 yni~s~ 334 (519)
||++++
T Consensus 201 ~~i~~~ 206 (215)
T 2a35_A 201 RFVESD 206 (215)
T ss_dssp EEEEHH
T ss_pred eEEcHH
Confidence 999876
|
| >3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes} | Back alignment and structure |
|---|
Probab=99.90 E-value=2e-23 Score=198.62 Aligned_cols=213 Identities=15% Similarity=0.103 Sum_probs=138.7
Q ss_pred CEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEEec
Q 010075 13 KTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVPG 92 (519)
Q Consensus 13 k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v~g 92 (519)
|+|||||||||||+++++.|++.| .+|+++.|+.... +.+ ..+++++.+
T Consensus 1 MkvlVtGatG~iG~~l~~~L~~~g---~~V~~~~R~~~~~---~~~-------------------------~~~~~~~~~ 49 (221)
T 3ew7_A 1 MKIGIIGATGRAGSRILEEAKNRG---HEVTAIVRNAGKI---TQT-------------------------HKDINILQK 49 (221)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTT---CEEEEEESCSHHH---HHH-------------------------CSSSEEEEC
T ss_pred CeEEEEcCCchhHHHHHHHHHhCC---CEEEEEEcCchhh---hhc-------------------------cCCCeEEec
Confidence 579999999999999999999998 6889999975321 100 156899999
Q ss_pred cCCCCCCCCChhhhHHHHhcCccEEEEcCccCCccccHHHHHHHhHHHHHHHHHHHHhccCCceEEEEecceeecCcCCe
Q 010075 93 DISSEDLGLKDSNLKEELWNELDIMVNSAAITKFDERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAYVAGERTGL 172 (519)
Q Consensus 93 Dl~~~~lgls~~~~~~~l~~~vdiViH~Aa~v~f~~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V~vSTa~v~~~~~~~ 172 (519)
|+++++ . ..+.++|+|||+||.... ....|+.++++++++|++. +.+++|++||..++....+.
T Consensus 50 D~~d~~-------~--~~~~~~d~vi~~ag~~~~------~~~~~~~~~~~l~~a~~~~-~~~~~v~~SS~~~~~~~~~~ 113 (221)
T 3ew7_A 50 DIFDLT-------L--SDLSDQNVVVDAYGISPD------EAEKHVTSLDHLISVLNGT-VSPRLLVVGGAASLQIDEDG 113 (221)
T ss_dssp CGGGCC-------H--HHHTTCSEEEECCCSSTT------TTTSHHHHHHHHHHHHCSC-CSSEEEEECCCC--------
T ss_pred cccChh-------h--hhhcCCCEEEECCcCCcc------ccchHHHHHHHHHHHHHhc-CCceEEEEecceEEEcCCCC
Confidence 999643 2 455789999999998532 1456999999999999986 78999999998765432210
Q ss_pred eecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcHHHHHHHHHHHHHHHh--hcCCc
Q 010075 173 ILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLMQQS--KENLS 250 (519)
Q Consensus 173 i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~Y~~sK~~aE~lv~~~--~~~lp 250 (519)
.+..++.+ ..+.+.|+.+|..+|.+.... ..+++
T Consensus 114 ---~~~~~~~~-----------------------------------------~~~~~~y~~~k~~~e~~~~~~~~~~gi~ 149 (221)
T 3ew7_A 114 ---NTLLESKG-----------------------------------------LREAPYYPTARAQAKQLEHLKSHQAEFS 149 (221)
T ss_dssp -------------------------------------------------------CCCSCCHHHHHHHHHHHHTTTTTSC
T ss_pred ---ccccccCC-----------------------------------------CCCHHHHHHHHHHHHHHHHHHhhccCcc
Confidence 00100000 023467999999999873322 46899
Q ss_pred EEEEecCccccCCCCCCCcccccccccHHHHHHhhcCCceeeccCCCceeeeeeHHHHHHHHHHHHHHhccCCCCCcEEE
Q 010075 251 LVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMIVAMVAHAKQPSDANIYH 330 (519)
Q Consensus 251 ~~IvRPs~V~g~~~~p~~gw~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~d~vpVDdva~aii~a~~~~~~~~~~~~iyn 330 (519)
++++||+.++|+.. ..+... .. +....+.+++ .++|+++|+|++++.++.+... .+++||
T Consensus 150 ~~ivrp~~v~g~~~--~~~~~~-----------~~-~~~~~~~~~~---~~~i~~~Dva~~~~~~l~~~~~---~g~~~~ 209 (221)
T 3ew7_A 150 WTYISPSAMFEPGE--RTGDYQ-----------IG-KDHLLFGSDG---NSFISMEDYAIAVLDEIERPNH---LNEHFT 209 (221)
T ss_dssp EEEEECSSCCCCC--------------------------------------CCCHHHHHHHHHHHHHSCSC---TTSEEE
T ss_pred EEEEeCcceecCCC--ccCceE-----------ec-cccceecCCC---CceEeHHHHHHHHHHHHhCccc---cCCEEE
Confidence 99999999999832 111100 00 1111222332 2689999999999999975432 368999
Q ss_pred ecCCCC
Q 010075 331 VGSSLR 336 (519)
Q Consensus 331 i~s~~~ 336 (519)
++++..
T Consensus 210 ~~~~~~ 215 (221)
T 3ew7_A 210 VAGKLE 215 (221)
T ss_dssp CCC---
T ss_pred ECCCCc
Confidence 988643
|
| >3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A* | Back alignment and structure |
|---|
Probab=99.90 E-value=7.5e-23 Score=208.95 Aligned_cols=227 Identities=15% Similarity=0.139 Sum_probs=158.2
Q ss_pred cCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccH-HHHHHHHHhhhhhHHHHHhhhccccccccCCceE
Q 010075 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSA-ALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKIT 88 (519)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~-~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~ 88 (519)
+++|+|||||||||+|++|++.|++.| ++|++++|+...... .+++. . +. ..+++
T Consensus 8 M~~~~IlVtGatG~iG~~l~~~L~~~g---~~V~~l~R~~~~~~~~~~~~~-~---------l~-----------~~~v~ 63 (346)
T 3i6i_A 8 SPKGRVLIAGATGFIGQFVATASLDAH---RPTYILARPGPRSPSKAKIFK-A---------LE-----------DKGAI 63 (346)
T ss_dssp ---CCEEEECTTSHHHHHHHHHHHHTT---CCEEEEECSSCCCHHHHHHHH-H---------HH-----------HTTCE
T ss_pred CCCCeEEEECCCcHHHHHHHHHHHHCC---CCEEEEECCCCCChhHHHHHH-H---------HH-----------hCCcE
Confidence 567899999999999999999999988 678999998743221 11111 0 00 26789
Q ss_pred EEeccCCCCCCCCChhhhHHHHhc--CccEEEEcCccCCccccHHHHHHHhHHHHHHHHHHHHhccCCceEEEEecceee
Q 010075 89 FVPGDISSEDLGLKDSNLKEELWN--ELDIMVNSAAITKFDERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAYVA 166 (519)
Q Consensus 89 ~v~gDl~~~~lgls~~~~~~~l~~--~vdiViH~Aa~v~f~~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V~vSTa~v~ 166 (519)
++.||+++ .+....+++ ++|+|||+||.. |+.++.+++++|++.+++++||+ | ++
T Consensus 64 ~~~~Dl~d-------~~~l~~~~~~~~~d~Vi~~a~~~------------n~~~~~~l~~aa~~~g~v~~~v~-S---~~ 120 (346)
T 3i6i_A 64 IVYGLINE-------QEAMEKILKEHEIDIVVSTVGGE------------SILDQIALVKAMKAVGTIKRFLP-S---EF 120 (346)
T ss_dssp EEECCTTC-------HHHHHHHHHHTTCCEEEECCCGG------------GGGGHHHHHHHHHHHCCCSEEEC-S---CC
T ss_pred EEEeecCC-------HHHHHHHHhhCCCCEEEECCchh------------hHHHHHHHHHHHHHcCCceEEee-c---cc
Confidence 99999994 444457778 999999999972 89999999999999744999986 4 23
Q ss_pred cCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcHHHHHHHHHHHHHHHhh
Q 010075 167 GERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLMQQSK 246 (519)
Q Consensus 167 ~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~Y~~sK~~aE~lv~~~~ 246 (519)
|.. .+|. .+. .+.+.|+.+|+.+|+++++
T Consensus 121 g~~---~~e~-----~~~-----------------------------------------~p~~~y~~sK~~~e~~l~~-- 149 (346)
T 3i6i_A 121 GHD---VNRA-----DPV-----------------------------------------EPGLNMYREKRRVRQLVEE-- 149 (346)
T ss_dssp SSC---TTTC-----CCC-----------------------------------------TTHHHHHHHHHHHHHHHHH--
T ss_pred CCC---CCcc-----CcC-----------------------------------------CCcchHHHHHHHHHHHHHH--
Confidence 321 1111 111 3457899999999999987
Q ss_pred cCCcEEEEecCccccCCCCCCCcccccccccHHHHHHhhcCCceeeccCCCceeeeeeHHHHHHHHHHHHHHhccCCCCC
Q 010075 247 ENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMIVAMVAHAKQPSDA 326 (519)
Q Consensus 247 ~~lp~~IvRPs~V~g~~~~p~~gw~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~d~vpVDdva~aii~a~~~~~~~~~~~ 326 (519)
.+++++++||+.++|.... ++.. .......+....++++++..+++++++|+|++++.++..... .+
T Consensus 150 ~g~~~tivrpg~~~g~~~~---~~~~-------~~~~~~~~~~~~~~g~g~~~~~~i~~~Dva~~~~~~l~~~~~---~~ 216 (346)
T 3i6i_A 150 SGIPFTYICCNSIASWPYY---NNIH-------PSEVLPPTDFFQIYGDGNVKAYFVAGTDIGKFTMKTVDDVRT---LN 216 (346)
T ss_dssp TTCCBEEEECCEESSCCCS---CC------------CCCCSSCEEEETTSCCCEEEECHHHHHHHHHHHTTCGGG---TT
T ss_pred cCCCEEEEEecccccccCc---cccc-------cccccCCCceEEEccCCCceEEecCHHHHHHHHHHHHhCccc---cC
Confidence 6899999999999996532 1111 011122334456778999999999999999999999875422 25
Q ss_pred cEEEecC-CCCCchhHHHHHHH
Q 010075 327 NIYHVGS-SLRNPVTLGLQVAN 347 (519)
Q Consensus 327 ~iyni~s-~~~~~i~~~~~~~~ 347 (519)
++||+++ +...++..+...+.
T Consensus 217 ~~~~i~g~~~~~s~~e~~~~~~ 238 (346)
T 3i6i_A 217 KSVHFRPSCNCLNINELASVWE 238 (346)
T ss_dssp EEEECCCGGGEECHHHHHHHHH
T ss_pred eEEEEeCCCCCCCHHHHHHHHH
Confidence 7899873 33333333444443
|
| >1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A* | Back alignment and structure |
|---|
Probab=99.90 E-value=1.5e-22 Score=190.29 Aligned_cols=204 Identities=14% Similarity=0.086 Sum_probs=149.7
Q ss_pred CCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEE
Q 010075 11 ENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFV 90 (519)
Q Consensus 11 ~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v 90 (519)
++|+|+|||||||||++++++|++.| .+|+++.|+..... .....+++++
T Consensus 2 ~~~~ilVtGatG~iG~~l~~~l~~~g---~~V~~~~r~~~~~~---------------------------~~~~~~~~~~ 51 (206)
T 1hdo_A 2 AVKKIAIFGATGQTGLTTLAQAVQAG---YEVTVLVRDSSRLP---------------------------SEGPRPAHVV 51 (206)
T ss_dssp CCCEEEEESTTSHHHHHHHHHHHHTT---CEEEEEESCGGGSC---------------------------SSSCCCSEEE
T ss_pred CCCEEEEEcCCcHHHHHHHHHHHHCC---CeEEEEEeChhhcc---------------------------cccCCceEEE
Confidence 35899999999999999999999988 68899999753221 0013578999
Q ss_pred eccCCCCCCCCChhhhHHHHhcCccEEEEcCccCCccccHHHHHHHhHHHHHHHHHHHHhccCCceEEEEecceeecCcC
Q 010075 91 PGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKFDERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAYVAGERT 170 (519)
Q Consensus 91 ~gDl~~~~lgls~~~~~~~l~~~vdiViH~Aa~v~f~~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V~vSTa~v~~~~~ 170 (519)
.+|+++ .+....+++++|+|||+|+.....+. .++|+.++.+++++|++. +.++||++||..+++...
T Consensus 52 ~~D~~~-------~~~~~~~~~~~d~vi~~a~~~~~~~~----~~~n~~~~~~~~~~~~~~-~~~~~v~~Ss~~~~~~~~ 119 (206)
T 1hdo_A 52 VGDVLQ-------AADVDKTVAGQDAVIVLLGTRNDLSP----TTVMSEGARNIVAAMKAH-GVDKVVACTSAFLLWDPT 119 (206)
T ss_dssp ESCTTS-------HHHHHHHHTTCSEEEECCCCTTCCSC----CCHHHHHHHHHHHHHHHH-TCCEEEEECCGGGTSCTT
T ss_pred EecCCC-------HHHHHHHHcCCCEEEECccCCCCCCc----cchHHHHHHHHHHHHHHh-CCCeEEEEeeeeeccCcc
Confidence 999994 44445778899999999997654221 248999999999999986 789999999998876432
Q ss_pred CeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcHHHHHHHHHHHHHHHhhcCCc
Q 010075 171 GLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLMQQSKENLS 250 (519)
Q Consensus 171 ~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~Y~~sK~~aE~lv~~~~~~lp 250 (519)
+ .+ .+.+.|+.+|..+|+++++ .+++
T Consensus 120 ~----------~~------------------------------------------~~~~~y~~~K~~~e~~~~~--~~i~ 145 (206)
T 1hdo_A 120 K----------VP------------------------------------------PRLQAVTDDHIRMHKVLRE--SGLK 145 (206)
T ss_dssp C----------SC------------------------------------------GGGHHHHHHHHHHHHHHHH--TCSE
T ss_pred c----------cc------------------------------------------ccchhHHHHHHHHHHHHHh--CCCC
Confidence 1 00 0246799999999999976 6899
Q ss_pred EEEEecCccccCCCCCCCcccccccccHHHHHHhhcCCceeeccCCCceeeeeeHHHHHHHHHHHHHHhccCCCCCcEEE
Q 010075 251 LVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMIVAMVAHAKQPSDANIYH 330 (519)
Q Consensus 251 ~~IvRPs~V~g~~~~p~~gw~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~d~vpVDdva~aii~a~~~~~~~~~~~~iyn 330 (519)
++++||+.++.... .+.... .+.+.+. .++++++|+|++++.++.... ..+++||
T Consensus 146 ~~~lrp~~~~~~~~---~~~~~~-----------------~~~~~~~--~~~i~~~Dva~~~~~~~~~~~---~~g~~~~ 200 (206)
T 1hdo_A 146 YVAVMPPHIGDQPL---TGAYTV-----------------TLDGRGP--SRVISKHDLGHFMLRCLTTDE---YDGHSTY 200 (206)
T ss_dssp EEEECCSEEECCCC---CSCCEE-----------------ESSSCSS--CSEEEHHHHHHHHHHTTSCST---TTTCEEE
T ss_pred EEEEeCCcccCCCC---CcceEe-----------------cccCCCC--CCccCHHHHHHHHHHHhcCcc---cccccee
Confidence 99999999843211 111100 0001111 489999999999999886422 2368999
Q ss_pred ecCCC
Q 010075 331 VGSSL 335 (519)
Q Consensus 331 i~s~~ 335 (519)
++++.
T Consensus 201 i~~g~ 205 (206)
T 1hdo_A 201 PSHQY 205 (206)
T ss_dssp EECCC
T ss_pred eeccc
Confidence 98873
|
| >2zcu_A Uncharacterized oxidoreductase YTFG; alpha-beta sandwich; 1.80A {Escherichia coli} PDB: 2zcv_A* | Back alignment and structure |
|---|
Probab=99.90 E-value=1.1e-22 Score=201.36 Aligned_cols=209 Identities=13% Similarity=0.118 Sum_probs=151.3
Q ss_pred EEEEeCCccHHHHHHHHHHHHh--CCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEEe
Q 010075 14 TILVSGVTGFVAKVFIEKILRV--QPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVP 91 (519)
Q Consensus 14 ~VlITGaTGFlG~~Lv~~LL~~--g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v~ 91 (519)
+|||||||||||+++++.|++. | .+|+++.|+..... .+. ..+++++.
T Consensus 1 ~ilVtGatG~iG~~l~~~L~~~~~g---~~V~~~~r~~~~~~---~~~------------------------~~~~~~~~ 50 (286)
T 2zcu_A 1 MIAITGATGQLGHYVIESLMKTVPA---SQIVAIVRNPAKAQ---ALA------------------------AQGITVRQ 50 (286)
T ss_dssp CEEEESTTSHHHHHHHHHHTTTSCG---GGEEEEESCTTTCH---HHH------------------------HTTCEEEE
T ss_pred CEEEEcCCchHHHHHHHHHHhhCCC---ceEEEEEcChHhhh---hhh------------------------cCCCeEEE
Confidence 4899999999999999999997 6 67899999764321 111 14678999
Q ss_pred ccCCCCCCCCChhhhHHHHhcCccEEEEcCccCCccccHHHHHHHhHHHHHHHHHHHHhccCCceEEEEecceeecCcCC
Q 010075 92 GDISSEDLGLKDSNLKEELWNELDIMVNSAAITKFDERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAYVAGERTG 171 (519)
Q Consensus 92 gDl~~~~lgls~~~~~~~l~~~vdiViH~Aa~v~f~~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V~vSTa~v~~~~~~ 171 (519)
+|+++ .+....+++++|+|||+|+.. ...|+.++.+++++|++. ++++|||+||..++.
T Consensus 51 ~D~~d-------~~~~~~~~~~~d~vi~~a~~~---------~~~~~~~~~~l~~a~~~~-~~~~~v~~Ss~~~~~---- 109 (286)
T 2zcu_A 51 ADYGD-------EAALTSALQGVEKLLLISSSE---------VGQRAPQHRNVINAAKAA-GVKFIAYTSLLHADT---- 109 (286)
T ss_dssp CCTTC-------HHHHHHHTTTCSEEEECC-----------------CHHHHHHHHHHHH-TCCEEEEEEETTTTT----
T ss_pred cCCCC-------HHHHHHHHhCCCEEEEeCCCC---------chHHHHHHHHHHHHHHHc-CCCEEEEECCCCCCC----
Confidence 99994 344457888999999999852 125899999999999986 789999999987641
Q ss_pred eeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcHHHHHHHHHHHHHHHhhcCCcE
Q 010075 172 LILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLMQQSKENLSL 251 (519)
Q Consensus 172 ~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~Y~~sK~~aE~lv~~~~~~lp~ 251 (519)
.+..|+.+|..+|+++++ .++++
T Consensus 110 -------------------------------------------------------~~~~y~~sK~~~e~~~~~--~~~~~ 132 (286)
T 2zcu_A 110 -------------------------------------------------------SPLGLADEHIETEKMLAD--SGIVY 132 (286)
T ss_dssp -------------------------------------------------------CCSTTHHHHHHHHHHHHH--HCSEE
T ss_pred -------------------------------------------------------CcchhHHHHHHHHHHHHH--cCCCe
Confidence 024699999999999986 58999
Q ss_pred EEEecCccccCCCCCCCcccccccccHHHHHHhhcCCceeeccCCCceeeeeeHHHHHHHHHHHHHHhccCCCCCcEEEe
Q 010075 252 VIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMIVAMVAHAKQPSDANIYHV 331 (519)
Q Consensus 252 ~IvRPs~V~g~~~~p~~gw~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~d~vpVDdva~aii~a~~~~~~~~~~~~iyni 331 (519)
+++||+.++++.. .+ +......|... .++++...++++++|+|++++.++..... .+++||+
T Consensus 133 ~ilrp~~~~~~~~----~~---------~~~~~~~~~~~--~~~~~~~~~~i~~~Dva~~~~~~~~~~~~---~g~~~~i 194 (286)
T 2zcu_A 133 TLLRNGWYSENYL----AS---------APAALEHGVFI--GAAGDGKIASATRADYAAAAARVISEAGH---EGKVYEL 194 (286)
T ss_dssp EEEEECCBHHHHH----TT---------HHHHHHHTEEE--ESCTTCCBCCBCHHHHHHHHHHHHHSSSC---TTCEEEE
T ss_pred EEEeChHHhhhhH----HH---------hHHhhcCCcee--ccCCCCccccccHHHHHHHHHHHhcCCCC---CCceEEE
Confidence 9999988766421 11 11112233332 45667889999999999999999874321 3679999
Q ss_pred cCCCCCchhHHHHHHHH
Q 010075 332 GSSLRNPVTLGLQVANT 348 (519)
Q Consensus 332 ~s~~~~~i~~~~~~~~~ 348 (519)
+++...++..+...+..
T Consensus 195 ~~~~~~s~~e~~~~i~~ 211 (286)
T 2zcu_A 195 AGDSAWTLTQLAAELTK 211 (286)
T ss_dssp CCSSCBCHHHHHHHHHH
T ss_pred eCCCcCCHHHHHHHHHH
Confidence 99866665555555443
|
| >1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A* | Back alignment and structure |
|---|
Probab=99.88 E-value=1.8e-22 Score=195.73 Aligned_cols=214 Identities=17% Similarity=0.144 Sum_probs=151.9
Q ss_pred CCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEE
Q 010075 11 ENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFV 90 (519)
Q Consensus 11 ~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v 90 (519)
.+|+|+|||||||||+++++.|++.++. .+|+++.|+.. ++. + ...++.++
T Consensus 3 ~~~~ilVtGasG~iG~~l~~~l~~~~~g-~~V~~~~r~~~------~~~-~---------------------~~~~~~~~ 53 (253)
T 1xq6_A 3 NLPTVLVTGASGRTGQIVYKKLKEGSDK-FVAKGLVRSAQ------GKE-K---------------------IGGEADVF 53 (253)
T ss_dssp SCCEEEEESTTSHHHHHHHHHHHHTTTT-CEEEEEESCHH------HHH-H---------------------TTCCTTEE
T ss_pred CCCEEEEEcCCcHHHHHHHHHHHhcCCC-cEEEEEEcCCC------chh-h---------------------cCCCeeEE
Confidence 5789999999999999999999998322 68899999631 111 0 02467789
Q ss_pred eccCCCCCCCCChhhhHHHHhcCccEEEEcCccCCcc----------------ccHHHHHHHhHHHHHHHHHHHHhccCC
Q 010075 91 PGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKFD----------------ERYDVAFGINTLGVIHLVNFAKKCVKL 154 (519)
Q Consensus 91 ~gDl~~~~lgls~~~~~~~l~~~vdiViH~Aa~v~f~----------------~~~~~~~~~Nv~gt~~ll~~a~~~~~l 154 (519)
.+|+++ .+....+++++|+|||+||..... +.....+++|+.++.+++++|++. ++
T Consensus 54 ~~D~~d-------~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~ 125 (253)
T 1xq6_A 54 IGDITD-------ADSINPAFQGIDALVILTSAVPKMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQKNQIDAAKVA-GV 125 (253)
T ss_dssp ECCTTS-------HHHHHHHHTTCSEEEECCCCCCEECTTCCTTSSCCCCEECCTTCSHHHHTTHHHHHHHHHHHHH-TC
T ss_pred EecCCC-------HHHHHHHHcCCCEEEEeccccccccccccccccccchhhccccccceeeeHHHHHHHHHHHHHc-CC
Confidence 999994 444457888999999999975321 112346789999999999999986 78
Q ss_pred ceEEEEecceeecCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcHHHHH
Q 010075 155 KVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFT 234 (519)
Q Consensus 155 ~~~V~vSTa~v~~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~Y~~s 234 (519)
++||++||..++... .+..+ .....|..+
T Consensus 126 ~~iv~~SS~~~~~~~------------~~~~~---------------------------------------~~~~~y~~s 154 (253)
T 1xq6_A 126 KHIVVVGSMGGTNPD------------HPLNK---------------------------------------LGNGNILVW 154 (253)
T ss_dssp SEEEEEEETTTTCTT------------CGGGG---------------------------------------GGGCCHHHH
T ss_pred CEEEEEcCccCCCCC------------Ccccc---------------------------------------ccchhHHHH
Confidence 899999998764211 01000 011458999
Q ss_pred HHHHHHHHHHhhcCCcEEEEecCccccCCCCCCCcccccccccHHHHHHhhcCCceeeccCCCceeeeeeHHHHHHHHHH
Q 010075 235 KTMGEMLMQQSKENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMIV 314 (519)
Q Consensus 235 K~~aE~lv~~~~~~lp~~IvRPs~V~g~~~~p~~gw~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~d~vpVDdva~aii~ 314 (519)
|+.+|.++++ .+++++++||+.++|+..... .... +....+.+. ..++++++|+|++++.
T Consensus 155 K~~~e~~~~~--~~i~~~~vrpg~v~~~~~~~~-~~~~--------------~~~~~~~~~---~~~~~~~~Dva~~~~~ 214 (253)
T 1xq6_A 155 KRKAEQYLAD--SGTPYTIIRAGGLLDKEGGVR-ELLV--------------GKDDELLQT---DTKTVPRADVAEVCIQ 214 (253)
T ss_dssp HHHHHHHHHT--SSSCEEEEEECEEECSCSSSS-CEEE--------------ESTTGGGGS---SCCEEEHHHHHHHHHH
T ss_pred HHHHHHHHHh--CCCceEEEecceeecCCcchh-hhhc--------------cCCcCCcCC---CCcEEcHHHHHHHHHH
Confidence 9999999886 689999999999999864211 1110 000111111 2468999999999999
Q ss_pred HHHHhccCCCCCcEEEecCCC
Q 010075 315 AMVAHAKQPSDANIYHVGSSL 335 (519)
Q Consensus 315 a~~~~~~~~~~~~iyni~s~~ 335 (519)
++..... .+++||++++.
T Consensus 215 ~~~~~~~---~g~~~~i~~~~ 232 (253)
T 1xq6_A 215 ALLFEEA---KNKAFDLGSKP 232 (253)
T ss_dssp HTTCGGG---TTEEEEEEECC
T ss_pred HHcCccc---cCCEEEecCCC
Confidence 9864322 26799999875
|
| >2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A | Back alignment and structure |
|---|
Probab=99.88 E-value=1.4e-21 Score=195.24 Aligned_cols=225 Identities=13% Similarity=0.060 Sum_probs=158.2
Q ss_pred CCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEEe
Q 010075 12 NKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVP 91 (519)
Q Consensus 12 ~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v~ 91 (519)
+|+|+|||||||+|+++++.|++.|. .+|+++.|+...... +.+. ..+++++.
T Consensus 5 ~~~ilVtGatG~iG~~l~~~L~~~g~--~~V~~~~R~~~~~~~-~~l~------------------------~~~~~~~~ 57 (299)
T 2wm3_A 5 KKLVVVFGGTGAQGGSVARTLLEDGT--FKVRVVTRNPRKKAA-KELR------------------------LQGAEVVQ 57 (299)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHHCS--SEEEEEESCTTSHHH-HHHH------------------------HTTCEEEE
T ss_pred CCEEEEECCCchHHHHHHHHHHhcCC--ceEEEEEcCCCCHHH-HHHH------------------------HCCCEEEE
Confidence 58999999999999999999999872 478999998654211 1111 14688999
Q ss_pred ccCCCCCCCCChhhhHHHHhcCccEEEEcCccCCccccHHHHHHHhHHHHHHHHHHHHhccCCceEEEEecceeecCcCC
Q 010075 92 GDISSEDLGLKDSNLKEELWNELDIMVNSAAITKFDERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAYVAGERTG 171 (519)
Q Consensus 92 gDl~~~~lgls~~~~~~~l~~~vdiViH~Aa~v~f~~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V~vSTa~v~~~~~~ 171 (519)
+|+++ .+....+++++|+|||+|+.... .....|+.++.+++++|++. ++++||++||..+++...+
T Consensus 58 ~D~~d-------~~~l~~~~~~~d~vi~~a~~~~~-----~~~~~~~~~~~~~~~aa~~~-gv~~iv~~S~~~~~~~~~~ 124 (299)
T 2wm3_A 58 GDQDD-------QVIMELALNGAYATFIVTNYWES-----CSQEQEVKQGKLLADLARRL-GLHYVVYSGLENIKKLTAG 124 (299)
T ss_dssp CCTTC-------HHHHHHHHTTCSEEEECCCHHHH-----TCHHHHHHHHHHHHHHHHHH-TCSEEEECCCCCHHHHTTT
T ss_pred ecCCC-------HHHHHHHHhcCCEEEEeCCCCcc-----ccchHHHHHHHHHHHHHHHc-CCCEEEEEcCccccccCCC
Confidence 99995 34445778899999999985311 02456889999999999986 8899999888766542110
Q ss_pred eeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcHHHHHHHHHHHHHHHhhcCCcE
Q 010075 172 LILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLMQQSKENLSL 251 (519)
Q Consensus 172 ~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~Y~~sK~~aE~lv~~~~~~lp~ 251 (519)
.+++.|..+|..+|+++++ .++++
T Consensus 125 ------------------------------------------------------~~~~~y~~sK~~~e~~~~~--~gi~~ 148 (299)
T 2wm3_A 125 ------------------------------------------------------RLAAAHFDGKGEVEEYFRD--IGVPM 148 (299)
T ss_dssp ------------------------------------------------------SCCCHHHHHHHHHHHHHHH--HTCCE
T ss_pred ------------------------------------------------------cccCchhhHHHHHHHHHHH--CCCCE
Confidence 2357899999999999987 58999
Q ss_pred EEEecCccccCCCCCCCcccccccccHHHHHHhhcCCcee-eccCCCceeeeeeHHHHHHHHHHHHHHhccCCCCCcEEE
Q 010075 252 VIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRC-LVGETKVIMDVIPVDMVVNAMIVAMVAHAKQPSDANIYH 330 (519)
Q Consensus 252 ~IvRPs~V~g~~~~p~~gw~~~~~~~~~~i~~~~~g~~~~-~~~~~~~~~d~vpVDdva~aii~a~~~~~~~~~~~~iyn 330 (519)
+++||+.++|+... .|... ....|.... ....++...++++++|+|+++..++...... .+++||
T Consensus 149 ~ilrp~~~~~~~~~---~~~~~---------~~~~g~~~~~~~~~~~~~~~~i~~~Dva~~~~~~l~~~~~~--~g~~~~ 214 (299)
T 2wm3_A 149 TSVRLPCYFENLLS---HFLPQ---------KAPDGKSYLLSLPTGDVPMDGMSVSDLGPVVLSLLKMPEKY--VGQNIG 214 (299)
T ss_dssp EEEECCEEGGGGGT---TTCCE---------ECTTSSSEEECCCCTTSCEEEECGGGHHHHHHHHHHSHHHH--TTCEEE
T ss_pred EEEeecHHhhhchh---hcCCc---------ccCCCCEEEEEecCCCCccceecHHHHHHHHHHHHcChhhh--CCeEEE
Confidence 99999999996432 11111 011232111 1224677899999999999999998743211 257999
Q ss_pred ecCCCCCchhHHHHHHH
Q 010075 331 VGSSLRNPVTLGLQVAN 347 (519)
Q Consensus 331 i~s~~~~~i~~~~~~~~ 347 (519)
+++ ...++..+...+.
T Consensus 215 ~~g-~~~s~~e~~~~~~ 230 (299)
T 2wm3_A 215 LST-CRHTAEEYAALLT 230 (299)
T ss_dssp CCS-EEECHHHHHHHHH
T ss_pred eee-ccCCHHHHHHHHH
Confidence 975 3333333444433
|
| >3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp} | Back alignment and structure |
|---|
Probab=99.88 E-value=2.3e-21 Score=192.53 Aligned_cols=211 Identities=11% Similarity=0.074 Sum_probs=148.4
Q ss_pred CEEEEeCCccHHHHHHHHHHHHh-CCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEEe
Q 010075 13 KTILVSGVTGFVAKVFIEKILRV-QPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVP 91 (519)
Q Consensus 13 k~VlITGaTGFlG~~Lv~~LL~~-g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v~ 91 (519)
|+|||||||||||+++++.|++. + .+|++++|+...... ....+++++.
T Consensus 1 M~ilVtGatG~iG~~l~~~L~~~~g---~~V~~~~R~~~~~~~---------------------------~~~~~v~~~~ 50 (289)
T 3e48_A 1 MNIMLTGATGHLGTHITNQAIANHI---DHFHIGVRNVEKVPD---------------------------DWRGKVSVRQ 50 (289)
T ss_dssp CCEEEETTTSHHHHHHHHHHHHTTC---TTEEEEESSGGGSCG---------------------------GGBTTBEEEE
T ss_pred CEEEEEcCCchHHHHHHHHHhhCCC---CcEEEEECCHHHHHH---------------------------hhhCCCEEEE
Confidence 57999999999999999999886 6 578999997643211 1136789999
Q ss_pred ccCCCCCCCCChhhhHHHHhcCccEEEEcCccCCccccHHHHHHHhHHHHHHHHHHHHhccCCceEEEEecceeecCcCC
Q 010075 92 GDISSEDLGLKDSNLKEELWNELDIMVNSAAITKFDERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAYVAGERTG 171 (519)
Q Consensus 92 gDl~~~~lgls~~~~~~~l~~~vdiViH~Aa~v~f~~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V~vSTa~v~~~~~~ 171 (519)
+|+++ .+....+++++|+|||+|+..... ..|+.++++++++|++. ++++|||+||......
T Consensus 51 ~D~~d-------~~~l~~~~~~~d~vi~~a~~~~~~-------~~~~~~~~~l~~aa~~~-gv~~iv~~Ss~~~~~~--- 112 (289)
T 3e48_A 51 LDYFN-------QESMVEAFKGMDTVVFIPSIIHPS-------FKRIPEVENLVYAAKQS-GVAHIIFIGYYADQHN--- 112 (289)
T ss_dssp CCTTC-------HHHHHHHTTTCSEEEECCCCCCSH-------HHHHHHHHHHHHHHHHT-TCCEEEEEEESCCSTT---
T ss_pred cCCCC-------HHHHHHHHhCCCEEEEeCCCCccc-------hhhHHHHHHHHHHHHHc-CCCEEEEEcccCCCCC---
Confidence 99994 444557889999999999976432 34899999999999996 7999999999432100
Q ss_pred eeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcHHHHHHHHHHHHHHHhhcCCcE
Q 010075 172 LILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLMQQSKENLSL 251 (519)
Q Consensus 172 ~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~Y~~sK~~aE~lv~~~~~~lp~ 251 (519)
. +..+...+..+|..+.+ .++++
T Consensus 113 ----------~---------------------------------------------~~~~~~~~~~~e~~~~~--~g~~~ 135 (289)
T 3e48_A 113 ----------N---------------------------------------------PFHMSPYFGYASRLLST--SGIDY 135 (289)
T ss_dssp ----------C---------------------------------------------CSTTHHHHHHHHHHHHH--HCCEE
T ss_pred ----------C---------------------------------------------CCccchhHHHHHHHHHH--cCCCE
Confidence 0 01112222345555554 58999
Q ss_pred EEEecCccccCCCCCCCcccccccccHHHHHHh-hcCCceeeccCCCceeeeeeHHHHHHHHHHHHHHhccCCCCCcEEE
Q 010075 252 VIIRPTVVSGTYKEPFPGWVEDLKTINTLFVAS-AQGNLRCLVGETKVIMDVIPVDMVVNAMIVAMVAHAKQPSDANIYH 330 (519)
Q Consensus 252 ~IvRPs~V~g~~~~p~~gw~~~~~~~~~~i~~~-~~g~~~~~~~~~~~~~d~vpVDdva~aii~a~~~~~~~~~~~~iyn 330 (519)
+++||+.++|+.. .| +... ..+. ...+.++...++++++|+|++++.++..... .+++||
T Consensus 136 ~ilrp~~~~~~~~----~~----------~~~~~~~~~--~~~~~g~~~~~~i~~~Dva~~~~~~l~~~~~---~g~~~~ 196 (289)
T 3e48_A 136 TYVRMAMYMDPLK----PY----------LPELMNMHK--LIYPAGDGRINYITRNDIARGVIAIIKNPDT---WGKRYL 196 (289)
T ss_dssp EEEEECEESTTHH----HH----------HHHHHHHTE--ECCCCTTCEEEEECHHHHHHHHHHHHHCGGG---TTCEEE
T ss_pred EEEeccccccccH----HH----------HHHHHHCCC--EecCCCCceeeeEEHHHHHHHHHHHHcCCCc---CCceEE
Confidence 9999999998532 11 1111 1222 2345678899999999999999999975432 157999
Q ss_pred ecCCCCCchhHHHHHHHH
Q 010075 331 VGSSLRNPVTLGLQVANT 348 (519)
Q Consensus 331 i~s~~~~~i~~~~~~~~~ 348 (519)
++ +...++..+...+..
T Consensus 197 ~~-~~~~s~~e~~~~~~~ 213 (289)
T 3e48_A 197 LS-GYSYDMKELAAILSE 213 (289)
T ss_dssp EC-CEEEEHHHHHHHHHH
T ss_pred eC-CCcCCHHHHHHHHHH
Confidence 99 755554445544443
|
| >1xgk_A Nitrogen metabolite repression regulator NMRA; rossmann fold, transcriptional regulation, short chain dehyd reductase, NADP binding; 1.40A {Emericella nidulans} SCOP: c.2.1.2 PDB: 1k6x_A* 1k6j_A 1k6i_A* 1ti7_A* 2vus_A 2vut_A* 2vuu_A* | Back alignment and structure |
|---|
Probab=99.86 E-value=9.5e-21 Score=194.15 Aligned_cols=213 Identities=14% Similarity=0.085 Sum_probs=149.7
Q ss_pred CCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEE
Q 010075 11 ENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFV 90 (519)
Q Consensus 11 ~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v 90 (519)
.+|+|+|||||||||++|++.|++.| .+|++++|+..... .+.+. . ..+++++
T Consensus 4 ~~~~ilVtGatG~iG~~l~~~L~~~g---~~V~~~~R~~~~~~-~~~l~-------------~----------~~~v~~v 56 (352)
T 1xgk_A 4 QKKTIAVVGATGRQGASLIRVAAAVG---HHVRAQVHSLKGLI-AEELQ-------------A----------IPNVTLF 56 (352)
T ss_dssp CCCCEEEESTTSHHHHHHHHHHHHTT---CCEEEEESCSCSHH-HHHHH-------------T----------STTEEEE
T ss_pred CCCEEEEECCCCHHHHHHHHHHHhCC---CEEEEEECCCChhh-HHHHh-------------h----------cCCcEEE
Confidence 36899999999999999999999988 57899999865431 11111 0 1468899
Q ss_pred ecc-CCCCCCCCChhhhHHHHhcCccEEEEcCccCCccccHHHHHHHhHHHHHHHHHHHHhccC-CceEEEEecceeecC
Q 010075 91 PGD-ISSEDLGLKDSNLKEELWNELDIMVNSAAITKFDERYDVAFGINTLGVIHLVNFAKKCVK-LKVFVHVSTAYVAGE 168 (519)
Q Consensus 91 ~gD-l~~~~lgls~~~~~~~l~~~vdiViH~Aa~v~f~~~~~~~~~~Nv~gt~~ll~~a~~~~~-l~~~V~vSTa~v~~~ 168 (519)
.+| +++ .+....+++++|+|||+|+.... ..|+.+ ++++++|++. + +++|||+||.++..
T Consensus 57 ~~D~l~d-------~~~l~~~~~~~d~Vi~~a~~~~~--------~~~~~~-~~l~~aa~~~-g~v~~~V~~SS~~~~~- 118 (352)
T 1xgk_A 57 QGPLLNN-------VPLMDTLFEGAHLAFINTTSQAG--------DEIAIG-KDLADAAKRA-GTIQHYIYSSMPDHSL- 118 (352)
T ss_dssp ESCCTTC-------HHHHHHHHTTCSEEEECCCSTTS--------CHHHHH-HHHHHHHHHH-SCCSEEEEEECCCGGG-
T ss_pred ECCccCC-------HHHHHHHHhcCCEEEEcCCCCCc--------HHHHHH-HHHHHHHHHc-CCccEEEEeCCccccc-
Confidence 999 984 44445778899999999986421 347777 9999999986 6 89999999986210
Q ss_pred cCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcHHHHHHHHHHHHHHHhhcC
Q 010075 169 RTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLMQQSKEN 248 (519)
Q Consensus 169 ~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~Y~~sK~~aE~lv~~~~~~ 248 (519)
+.+ .+++.|..||+.+|+++++ .+
T Consensus 119 ---------~~~---------------------------------------------~~~~~y~~sK~~~E~~~~~--~g 142 (352)
T 1xgk_A 119 ---------YGP---------------------------------------------WPAVPMWAPKFTVENYVRQ--LG 142 (352)
T ss_dssp ---------TSS---------------------------------------------CCCCTTTHHHHHHHHHHHT--SS
T ss_pred ---------cCC---------------------------------------------CCCccHHHHHHHHHHHHHH--cC
Confidence 100 2346799999999999987 48
Q ss_pred CcEEEEecCccccCCCCCCCcccccccccHHHHHHhhcCCce-eeccCCCceeeeeeH-HHHHHHHHHHHHHhccCCCCC
Q 010075 249 LSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLR-CLVGETKVIMDVIPV-DMVVNAMIVAMVAHAKQPSDA 326 (519)
Q Consensus 249 lp~~IvRPs~V~g~~~~p~~gw~~~~~~~~~~i~~~~~g~~~-~~~~~~~~~~d~vpV-Ddva~aii~a~~~~~~~~~~~ 326 (519)
++++|+||+ +||+...... ...+.. .....|... .++++++...+++++ ||+|++++.++....... .+
T Consensus 143 i~~~ivrpg-~~g~~~~~~~--~~~~~~-----~~~~~g~~~~~~~~~~~~~~~~i~v~~Dva~ai~~~l~~~~~~~-~g 213 (352)
T 1xgk_A 143 LPSTFVYAG-IYNNNFTSLP--YPLFQM-----ELMPDGTFEWHAPFDPDIPLPWLDAEHDVGPALLQIFKDGPQKW-NG 213 (352)
T ss_dssp SCEEEEEEC-EEGGGCBSSS--CSSCBE-----EECTTSCEEEEESSCTTSCEEEECHHHHHHHHHHHHHHHCHHHH-TT
T ss_pred CCEEEEecc-eecCCchhcc--cccccc-----cccCCCceEEeeccCCCCceeeEecHHHHHHHHHHHHhCCchhh-CC
Confidence 999999998 4676432110 000000 001234332 346778889999999 999999999987532100 25
Q ss_pred cEEEecC
Q 010075 327 NIYHVGS 333 (519)
Q Consensus 327 ~iyni~s 333 (519)
++||+++
T Consensus 214 ~~~~l~~ 220 (352)
T 1xgk_A 214 HRIALTF 220 (352)
T ss_dssp CEEEECS
T ss_pred eEEEEec
Confidence 7999985
|
| >1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A* | Back alignment and structure |
|---|
Probab=99.86 E-value=2.6e-20 Score=181.37 Aligned_cols=225 Identities=15% Similarity=0.124 Sum_probs=156.6
Q ss_pred cCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 010075 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (519)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (519)
+++|+|+||||||+||+++++.|++.| .+|+++.|+... .+.+.+ .++.. ..++.+
T Consensus 9 ~~~~~vlVtGasggiG~~la~~l~~~G---~~V~~~~r~~~~---~~~~~~---------~~~~~---------~~~~~~ 64 (255)
T 1fmc_A 9 LDGKCAIITGAGAGIGKEIAITFATAG---ASVVVSDINADA---ANHVVD---------EIQQL---------GGQAFA 64 (255)
T ss_dssp CTTCEEEETTTTSHHHHHHHHHHHTTT---CEEEEEESCHHH---HHHHHH---------HHHHT---------TCCEEE
T ss_pred CCCCEEEEECCccHHHHHHHHHHHHCC---CEEEEEcCCHHH---HHHHHH---------HHHHh---------CCceEE
Confidence 678999999999999999999999998 678999986421 122211 11111 246889
Q ss_pred EeccCCCCCCCCChhhhHHHHhc-------CccEEEEcCccCCc------cccHHHHHHHhHHHHHHHHHHHHhc---cC
Q 010075 90 VPGDISSEDLGLKDSNLKEELWN-------ELDIMVNSAAITKF------DERYDVAFGINTLGVIHLVNFAKKC---VK 153 (519)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~~-------~vdiViH~Aa~v~f------~~~~~~~~~~Nv~gt~~ll~~a~~~---~~ 153 (519)
+.+|+++ .+..+.+++ ++|+|||+||.... .+.++..+++|+.|+.++++.+.+. .+
T Consensus 65 ~~~D~~~-------~~~~~~~~~~~~~~~~~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~ 137 (255)
T 1fmc_A 65 CRCDITS-------EQELSALADFAISKLGKVDILVNNAGGGGPKPFDMPMADFRRAYELNVFSFFHLSQLVAPEMEKNG 137 (255)
T ss_dssp EECCTTC-------HHHHHHHHHHHHHHHSSCCEEEECCCCCCCCCTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT
T ss_pred EEcCCCC-------HHHHHHHHHHHHHhcCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC
Confidence 9999995 332334443 79999999997643 2457788999999999999887531 25
Q ss_pred CceEEEEecceeecCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcHHHH
Q 010075 154 LKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVF 233 (519)
Q Consensus 154 l~~~V~vSTa~v~~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~Y~~ 233 (519)
.++||++||...+... .+...|+.
T Consensus 138 ~~~iv~~sS~~~~~~~--------------------------------------------------------~~~~~Y~~ 161 (255)
T 1fmc_A 138 GGVILTITSMAAENKN--------------------------------------------------------INMTSYAS 161 (255)
T ss_dssp CEEEEEECCGGGTCCC--------------------------------------------------------TTCHHHHH
T ss_pred CcEEEEEcchhhcCCC--------------------------------------------------------CCCcccHH
Confidence 6899999998665321 22467999
Q ss_pred HHHHHHHHHHHh-----hcCCcEEEEecCccccCCCCCCCcccccccccHHHHHHhhcCCceeeccCCCceeeeeeHHHH
Q 010075 234 TKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMV 308 (519)
Q Consensus 234 sK~~aE~lv~~~-----~~~lp~~IvRPs~V~g~~~~p~~gw~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~d~vpVDdv 308 (519)
||+..|.+++.+ ..++++.++|||.|+++..... ...........+. ....+++++|+
T Consensus 162 sK~a~~~~~~~~~~~~~~~~i~v~~v~Pg~v~t~~~~~~--------~~~~~~~~~~~~~---------~~~~~~~~~dv 224 (255)
T 1fmc_A 162 SKAAASHLVRNMAFDLGEKNIRVNGIAPGAILTDALKSV--------ITPEIEQKMLQHT---------PIRRLGQPQDI 224 (255)
T ss_dssp HHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCSHHHHTT--------CCHHHHHHHHHTC---------SSCSCBCHHHH
T ss_pred HHHHHHHHHHHHHHHhhhcCcEEEEEecccCcchhhhhc--------cChHHHHHHHhcC---------CcccCCCHHHH
Confidence 999999998765 3479999999999988643211 0111222222221 12347889999
Q ss_pred HHHHHHHHHHhccCCCCCcEEEecCCCCCch
Q 010075 309 VNAMIVAMVAHAKQPSDANIYHVGSSLRNPV 339 (519)
Q Consensus 309 a~aii~a~~~~~~~~~~~~iyni~s~~~~~i 339 (519)
|++++.++..... ...+++||+++|...++
T Consensus 225 a~~~~~l~~~~~~-~~~G~~~~v~gg~~~s~ 254 (255)
T 1fmc_A 225 ANAALFLCSPAAS-WVSGQILTVSGGGVQEL 254 (255)
T ss_dssp HHHHHHHHSGGGT-TCCSCEEEESTTSCCCC
T ss_pred HHHHHHHhCCccc-cCCCcEEEECCceeccC
Confidence 9999998864322 12368999999876554
|
| >2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP} | Back alignment and structure |
|---|
Probab=99.86 E-value=4.4e-21 Score=186.46 Aligned_cols=233 Identities=12% Similarity=0.062 Sum_probs=152.2
Q ss_pred CEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEEec
Q 010075 13 KTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVPG 92 (519)
Q Consensus 13 k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v~g 92 (519)
|+|||||||||||++++++|++.| .+|+++.|+..... . .+.+
T Consensus 2 k~vlVtGasg~iG~~l~~~L~~~g---~~V~~~~r~~~~~~-------------------------------~---~~~~ 44 (255)
T 2dkn_A 2 SVIAITGSASGIGAALKELLARAG---HTVIGIDRGQADIE-------------------------------A---DLST 44 (255)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTT---CEEEEEESSSSSEE-------------------------------C---CTTS
T ss_pred cEEEEeCCCcHHHHHHHHHHHhCC---CEEEEEeCChhHcc-------------------------------c---cccC
Confidence 589999999999999999999988 67899999754320 1 1567
Q ss_pred cCCCCCCCCChhhhHHHHhc----CccEEEEcCccCCccccHHHHHHHhHHHHHHHHHHHHhc---cCCceEEEEeccee
Q 010075 93 DISSEDLGLKDSNLKEELWN----ELDIMVNSAAITKFDERYDVAFGINTLGVIHLVNFAKKC---VKLKVFVHVSTAYV 165 (519)
Q Consensus 93 Dl~~~~lgls~~~~~~~l~~----~vdiViH~Aa~v~f~~~~~~~~~~Nv~gt~~ll~~a~~~---~~l~~~V~vSTa~v 165 (519)
|++ +.+..+.+++ ++|+|||+||......+++..+++|+.|+.++++++.+. .+.+++|++||..+
T Consensus 45 D~~-------~~~~~~~~~~~~~~~~d~vi~~Ag~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~ 117 (255)
T 2dkn_A 45 PGG-------RETAVAAVLDRCGGVLDGLVCCAGVGVTAANSGLVVAVNYFGVSALLDGLAEALSRGQQPAAVIVGSIAA 117 (255)
T ss_dssp HHH-------HHHHHHHHHHHHTTCCSEEEECCCCCTTSSCHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGG
T ss_pred Ccc-------cHHHHHHHHHHcCCCccEEEECCCCCCcchhHHHHHHHHhHHHHHHHHHHHHHhhhcCCceEEEEecccc
Confidence 877 3333344443 899999999987655678999999999999999988653 24589999999988
Q ss_pred ecCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcHHHHHHHHHHHHHHHh
Q 010075 166 AGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLMQQS 245 (519)
Q Consensus 166 ~~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~Y~~sK~~aE~lv~~~ 245 (519)
++..... ....+... ..+++....... ....+.+.|+.||+..|.+++.+
T Consensus 118 ~~~~~~~-----------~~~~~~~~------------~~~~~~~~~~~~-------~~~~~~~~Y~~sK~a~~~~~~~~ 167 (255)
T 2dkn_A 118 TQPGAAE-----------LPMVEAML------------AGDEARAIELAE-------QQGQTHLAYAGSKYAVTCLARRN 167 (255)
T ss_dssp GSTTGGG-----------CHHHHHHH------------HTCHHHHHHHHH-------HHCCHHHHHHHHHHHHHHHHHHT
T ss_pred ccccccc-----------cchhhhhc------------ccchhhhhhhcc-------ccCCcchhHHHHHHHHHHHHHHH
Confidence 7643210 00000000 001111000000 00123468999999999999876
Q ss_pred -----hcCCcEEEEecCccccCCCCCCCcccccccccHHHHHHhhcCCceeeccCCCceeeeeeHHHHHHHHHHHHHHhc
Q 010075 246 -----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMIVAMVAHA 320 (519)
Q Consensus 246 -----~~~lp~~IvRPs~V~g~~~~p~~gw~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~d~vpVDdva~aii~a~~~~~ 320 (519)
..+++++++||+.|+++.... +... ....... . .+ . + ...++++++|+|++++.++....
T Consensus 168 ~~~~~~~gi~v~~v~pg~v~~~~~~~---~~~~-~~~~~~~----~----~~-~-~-~~~~~~~~~dva~~~~~l~~~~~ 232 (255)
T 2dkn_A 168 VVDWAGRGVRLNVVAPGAVETPLLQA---SKAD-PRYGEST----R----RF-V-A-PLGRGSEPREVAEAIAFLLGPQA 232 (255)
T ss_dssp HHHHHHTTCEEEEEEECCBCSHHHHH---HHHC-TTTHHHH----H----SC-C-C-TTSSCBCHHHHHHHHHHHHSGGG
T ss_pred HHHHhhcCcEEEEEcCCcccchhhhh---cccc-hhhHHHH----H----HH-H-H-HhcCCCCHHHHHHHHHHHhCCCc
Confidence 258999999999998864311 0000 0000000 0 00 0 1 33478999999999999986432
Q ss_pred cCCCCCcEEEecCCC
Q 010075 321 KQPSDANIYHVGSSL 335 (519)
Q Consensus 321 ~~~~~~~iyni~s~~ 335 (519)
. ...+++||+++|.
T Consensus 233 ~-~~~G~~~~v~gg~ 246 (255)
T 2dkn_A 233 S-FIHGSVLFVDGGM 246 (255)
T ss_dssp T-TCCSCEEEESTTH
T ss_pred c-cceeeEEEecCCe
Confidence 1 1236899999873
|
| >3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis} | Back alignment and structure |
|---|
Probab=99.85 E-value=2.1e-20 Score=185.28 Aligned_cols=223 Identities=13% Similarity=0.086 Sum_probs=148.5
Q ss_pred CCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEE
Q 010075 11 ENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFV 90 (519)
Q Consensus 11 ~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v 90 (519)
.+|+|+||||+||||++++++|++.| .+|+++.|+..... .+. ++ ...++.++
T Consensus 4 ~~k~vlVTGas~gIG~~~a~~l~~~G---~~V~~~~r~~~~~~---~~~-------------~~--------~~~~~~~~ 56 (281)
T 3m1a_A 4 SAKVWLVTGASSGFGRAIAEAAVAAG---DTVIGTARRTEALD---DLV-------------AA--------YPDRAEAI 56 (281)
T ss_dssp CCCEEEETTTTSHHHHHHHHHHHHTT---CEEEEEESSGGGGH---HHH-------------HH--------CTTTEEEE
T ss_pred CCcEEEEECCCChHHHHHHHHHHHCC---CEEEEEeCCHHHHH---HHH-------------Hh--------ccCCceEE
Confidence 57999999999999999999999998 68899999754321 111 11 13578999
Q ss_pred eccCCCCCCCCChhhhHHHHhc-------CccEEEEcCccCCc-------cccHHHHHHHhHHH----HHHHHHHHHhcc
Q 010075 91 PGDISSEDLGLKDSNLKEELWN-------ELDIMVNSAAITKF-------DERYDVAFGINTLG----VIHLVNFAKKCV 152 (519)
Q Consensus 91 ~gDl~~~~lgls~~~~~~~l~~-------~vdiViH~Aa~v~f-------~~~~~~~~~~Nv~g----t~~ll~~a~~~~ 152 (519)
.+|++++ +..+.+++ ++|+|||+||.... .+.++..+++|+.| ++.+++.+++.
T Consensus 57 ~~Dv~~~-------~~~~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~- 128 (281)
T 3m1a_A 57 SLDVTDG-------ERIDVVAADVLARYGRVDVLVNNAGRTQVGAFEETTERELRDLFELHVFGPARLTRALLPQMRER- 128 (281)
T ss_dssp ECCTTCH-------HHHHHHHHHHHHHHSCCSEEEECCCCEEECCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-
T ss_pred EeeCCCH-------HHHHHHHHHHHHhCCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-
Confidence 9999953 32334433 79999999997532 25677889999999 55555555553
Q ss_pred CCceEEEEecceeecCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcHHH
Q 010075 153 KLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYV 232 (519)
Q Consensus 153 ~l~~~V~vSTa~v~~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~Y~ 232 (519)
+..++|++||...+... .+...|+
T Consensus 129 ~~~~iv~~sS~~~~~~~--------------------------------------------------------~~~~~Y~ 152 (281)
T 3m1a_A 129 GSGSVVNISSFGGQLSF--------------------------------------------------------AGFSAYS 152 (281)
T ss_dssp TCEEEEEECCGGGTCCC--------------------------------------------------------TTCHHHH
T ss_pred CCCEEEEEcCccccCCC--------------------------------------------------------CCchHHH
Confidence 67899999997654211 2346899
Q ss_pred HHHHHHHHHHHHh-----hcCCcEEEEecCccccCCCCCCCcc-cccccccHHHHHHhhcCCceeeccCCCceeeeeeHH
Q 010075 233 FTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGW-VEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVD 306 (519)
Q Consensus 233 ~sK~~aE~lv~~~-----~~~lp~~IvRPs~V~g~~~~p~~gw-~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~d~vpVD 306 (519)
.||+..|.+++.+ ..++++++++||.|.++...+.... ...... +......+.. .........+++++
T Consensus 153 ~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~---~~~~~~~~~~---~~~~~~~~~~~~~~ 226 (281)
T 3m1a_A 153 ATKAALEQLSEGLADEVAPFGIKVLIVEPGAFRTNLFGKGAAYFSEENPA---YAEKVGPTRQ---LVQGSDGSQPGDPA 226 (281)
T ss_dssp HHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCTTTCCCCEEECCBCTT---THHHHHHHHH---HHHC-----CBCHH
T ss_pred HHHHHHHHHHHHHHHHhhccCcEEEEEecCccccccccccccccCCcchh---hHHHhHHHHH---HHhhccCCCCCCHH
Confidence 9999999998865 2589999999999988764332211 111111 1111100000 01112334577899
Q ss_pred HHHHHHHHHHHHhccCCCCCcEEEecCC
Q 010075 307 MVVNAMIVAMVAHAKQPSDANIYHVGSS 334 (519)
Q Consensus 307 dva~aii~a~~~~~~~~~~~~iyni~s~ 334 (519)
|+|++++.++.... .+..|+++++
T Consensus 227 dva~a~~~~~~~~~----~~~~~~l~s~ 250 (281)
T 3m1a_A 227 KAAAAIRLALDTEK----TPLRLALGGD 250 (281)
T ss_dssp HHHHHHHHHHHSSS----CCSEEEESHH
T ss_pred HHHHHHHHHHhCCC----CCeEEecCch
Confidence 99999999987432 2468999875
|
| >1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.85 E-value=3.4e-20 Score=179.42 Aligned_cols=217 Identities=17% Similarity=0.173 Sum_probs=152.2
Q ss_pred cCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 010075 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (519)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (519)
+++|+|+|||||||||++++++|++.| .+|+++.|+... .+++. ++ ..++++
T Consensus 5 ~~~~~vlVTGasggiG~~~a~~l~~~G---~~V~~~~r~~~~---~~~~~-------------~~---------~~~~~~ 56 (244)
T 1cyd_A 5 FSGLRALVTGAGKGIGRDTVKALHASG---AKVVAVTRTNSD---LVSLA-------------KE---------CPGIEP 56 (244)
T ss_dssp CTTCEEEEESTTSHHHHHHHHHHHHTT---CEEEEEESCHHH---HHHHH-------------HH---------STTCEE
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCC---CEEEEEeCCHHH---HHHHH-------------Hh---------ccCCCc
Confidence 678999999999999999999999998 678999886421 11111 11 134677
Q ss_pred EeccCCCCCCCCChhhhHHHHhc---CccEEEEcCccCCc-------cccHHHHHHHhHHHHHHHHHHHHhc---cC-Cc
Q 010075 90 VPGDISSEDLGLKDSNLKEELWN---ELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKC---VK-LK 155 (519)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~~---~vdiViH~Aa~v~f-------~~~~~~~~~~Nv~gt~~ll~~a~~~---~~-l~ 155 (519)
+.+|+++ .+..+.+++ ++|+|||+||.... .+.++..+++|+.|+.++++.+.+. .+ .+
T Consensus 57 ~~~D~~~-------~~~~~~~~~~~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~ 129 (244)
T 1cyd_A 57 VCVDLGD-------WDATEKALGGIGPVDLLVNNAALVIMQPFLEVTKEAFDRSFSVNLRSVFQVSQMVARDMINRGVPG 129 (244)
T ss_dssp EECCTTC-------HHHHHHHHTTCCCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCE
T ss_pred EEecCCC-------HHHHHHHHHHcCCCCEEEECCcccCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCe
Confidence 8999995 333345554 58999999997542 2457788999999999999887653 13 57
Q ss_pred eEEEEecceeecCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcHHHHHH
Q 010075 156 VFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTK 235 (519)
Q Consensus 156 ~~V~vSTa~v~~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~Y~~sK 235 (519)
+||++||..++... .....|+.||
T Consensus 130 ~iv~~sS~~~~~~~--------------------------------------------------------~~~~~Y~~sK 153 (244)
T 1cyd_A 130 SIVNVSSMVAHVTF--------------------------------------------------------PNLITYSSTK 153 (244)
T ss_dssp EEEEECCGGGTSCC--------------------------------------------------------TTBHHHHHHH
T ss_pred EEEEEcchhhcCCC--------------------------------------------------------CCcchhHHHH
Confidence 99999998665421 1235799999
Q ss_pred HHHHHHHHHh-----hcCCcEEEEecCccccCCCCCCCcccccccccHHHHHHhhcCCceeeccCCCceeeeeeHHHHHH
Q 010075 236 TMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVN 310 (519)
Q Consensus 236 ~~aE~lv~~~-----~~~lp~~IvRPs~V~g~~~~p~~gw~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~d~vpVDdva~ 310 (519)
+..|.+++.+ ..++++.++||+.|+++..... + ....++..+..+ ....++++++|+|+
T Consensus 154 ~a~~~~~~~~a~~~~~~gi~v~~v~pg~v~t~~~~~~--~-----~~~~~~~~~~~~---------~~~~~~~~~~dva~ 217 (244)
T 1cyd_A 154 GAMTMLTKAMAMELGPHKIRVNSVNPTVVLTDMGKKV--S-----ADPEFARKLKER---------HPLRKFAEVEDVVN 217 (244)
T ss_dssp HHHHHHHHHHHHHHGGGTEEEEEEEECCBTTHHHHHH--T-----CCHHHHHHHHHH---------STTSSCBCHHHHHH
T ss_pred HHHHHHHHHHHHHhhhcCeEEEEEecCcccCcccccc--c-----cCHHHHHHHHhc---------CCccCCCCHHHHHH
Confidence 9999998865 2579999999999998643210 0 011122222211 12357899999999
Q ss_pred HHHHHHHHhccCCCCCcEEEecCC
Q 010075 311 AMIVAMVAHAKQPSDANIYHVGSS 334 (519)
Q Consensus 311 aii~a~~~~~~~~~~~~iyni~s~ 334 (519)
+++.++..... ...++++++.+|
T Consensus 218 ~~~~l~~~~~~-~~~G~~~~v~gG 240 (244)
T 1cyd_A 218 SILFLLSDRSA-STSGGGILVDAG 240 (244)
T ss_dssp HHHHHHSGGGT-TCCSSEEEESTT
T ss_pred HHHHHhCchhh-cccCCEEEECCC
Confidence 99998864332 223678888776
|
| >3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A* | Back alignment and structure |
|---|
Probab=99.85 E-value=4e-20 Score=179.11 Aligned_cols=217 Identities=18% Similarity=0.222 Sum_probs=151.2
Q ss_pred cCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 010075 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (519)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (519)
++||+|+||||||+||++++++|++.| .+|+++.|+... .+.+. ++ ..++.+
T Consensus 5 l~~k~vlITGasggiG~~~a~~l~~~G---~~V~~~~r~~~~---~~~~~-------------~~---------~~~~~~ 56 (244)
T 3d3w_A 5 LAGRRVLVTGAGKGIGRGTVQALHATG---ARVVAVSRTQAD---LDSLV-------------RE---------CPGIEP 56 (244)
T ss_dssp CTTCEEEEESTTSHHHHHHHHHHHHTT---CEEEEEESCHHH---HHHHH-------------HH---------STTCEE
T ss_pred cCCcEEEEECCCcHHHHHHHHHHHHCC---CEEEEEeCCHHH---HHHHH-------------HH---------cCCCCE
Confidence 678999999999999999999999998 678998886321 11111 11 124567
Q ss_pred EeccCCCCCCCCChhhhHHHHhc---CccEEEEcCccCCc-------cccHHHHHHHhHHHHHHHHHHHHhc---cC-Cc
Q 010075 90 VPGDISSEDLGLKDSNLKEELWN---ELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKC---VK-LK 155 (519)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~~---~vdiViH~Aa~v~f-------~~~~~~~~~~Nv~gt~~ll~~a~~~---~~-l~ 155 (519)
+.+|+++ .+..+.+++ ++|+|||+||.... .+.++..+++|+.|+.++++.+.+. .+ ..
T Consensus 57 ~~~D~~~-------~~~~~~~~~~~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~~~ 129 (244)
T 3d3w_A 57 VCVDLGD-------WEATERALGSVGPVDLLVNNAAVALLQPFLEVTKEAFDRSFEVNLRAVIQVSQIVARGLIARGVPG 129 (244)
T ss_dssp EECCTTC-------HHHHHHHHTTCCCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCE
T ss_pred EEEeCCC-------HHHHHHHHHHcCCCCEEEECCccCCCcchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCc
Confidence 8999995 333345554 58999999997543 2457788999999999998887653 13 67
Q ss_pred eEEEEecceeecCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcHHHHHH
Q 010075 156 VFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTK 235 (519)
Q Consensus 156 ~~V~vSTa~v~~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~Y~~sK 235 (519)
++|++||...+... .....|+.||
T Consensus 130 ~iv~~sS~~~~~~~--------------------------------------------------------~~~~~Y~~sK 153 (244)
T 3d3w_A 130 AIVNVSSQCSQRAV--------------------------------------------------------TNHSVYCSTK 153 (244)
T ss_dssp EEEEECCGGGTSCC--------------------------------------------------------TTBHHHHHHH
T ss_pred EEEEeCchhhccCC--------------------------------------------------------CCCchHHHHH
Confidence 99999998654321 2246799999
Q ss_pred HHHHHHHHHh-----hcCCcEEEEecCccccCCCCCCCcccccccccHHHHHHhhcCCceeeccCCCceeeeeeHHHHHH
Q 010075 236 TMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVN 310 (519)
Q Consensus 236 ~~aE~lv~~~-----~~~lp~~IvRPs~V~g~~~~p~~gw~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~d~vpVDdva~ 310 (519)
+..|.+++.+ ..++++.++||+.|.++..... +.. .........+ ....++++++|+|+
T Consensus 154 ~a~~~~~~~la~e~~~~~i~v~~v~Pg~v~t~~~~~~--~~~-----~~~~~~~~~~---------~~~~~~~~~~dva~ 217 (244)
T 3d3w_A 154 GALDMLTKVMALELGPHKIRVNAVNPTVVMTSMGQAT--WSD-----PHKAKTMLNR---------IPLGKFAEVEHVVN 217 (244)
T ss_dssp HHHHHHHHHHHHHHGGGTEEEEEEEECCBTTTTHHHH--SCS-----TTHHHHHHHT---------CTTCSCBCHHHHHH
T ss_pred HHHHHHHHHHHHHhcccCeEEEEEEeccccccchhhh--ccC-----hHHHHHHHhh---------CCCCCCcCHHHHHH
Confidence 9999998765 2579999999999988753210 000 0111111111 11246789999999
Q ss_pred HHHHHHHHhccCCCCCcEEEecCC
Q 010075 311 AMIVAMVAHAKQPSDANIYHVGSS 334 (519)
Q Consensus 311 aii~a~~~~~~~~~~~~iyni~s~ 334 (519)
+++.++..... ...+++|++.+|
T Consensus 218 ~~~~l~~~~~~-~~~G~~~~v~gG 240 (244)
T 3d3w_A 218 AILFLLSDRSG-MTTGSTLPVEGG 240 (244)
T ss_dssp HHHHHHSGGGT-TCCSCEEEESTT
T ss_pred HHHHHcCcccc-CCCCCEEEECCC
Confidence 99998864322 123689999887
|
| >2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A* | Back alignment and structure |
|---|
Probab=99.84 E-value=5.6e-20 Score=181.50 Aligned_cols=229 Identities=16% Similarity=0.196 Sum_probs=157.4
Q ss_pred hcCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceE
Q 010075 9 FLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKIT 88 (519)
Q Consensus 9 ~~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~ 88 (519)
.+++|+|+||||||+||++++++|++.| .+|+++.|+... .+.+. ++.+. ..++.
T Consensus 13 ~l~~k~vlITGasggiG~~~a~~l~~~G---~~V~~~~r~~~~---~~~~~-------------~~~~~------~~~~~ 67 (278)
T 2bgk_A 13 RLQDKVAIITGGAGGIGETTAKLFVRYG---AKVVIADIADDH---GQKVC-------------NNIGS------PDVIS 67 (278)
T ss_dssp TTTTCEEEEESTTSHHHHHHHHHHHHTT---CEEEEEESCHHH---HHHHH-------------HHHCC------TTTEE
T ss_pred cccCCEEEEECCCCHHHHHHHHHHHHCC---CEEEEEcCChhH---HHHHH-------------HHhCC------CCceE
Confidence 3678999999999999999999999998 678888886321 11111 11110 13789
Q ss_pred EEeccCCCCCCCCChhhhHHHHhc-------CccEEEEcCccCCc---------cccHHHHHHHhHHHHHHHHHHHHhc-
Q 010075 89 FVPGDISSEDLGLKDSNLKEELWN-------ELDIMVNSAAITKF---------DERYDVAFGINTLGVIHLVNFAKKC- 151 (519)
Q Consensus 89 ~v~gDl~~~~lgls~~~~~~~l~~-------~vdiViH~Aa~v~f---------~~~~~~~~~~Nv~gt~~ll~~a~~~- 151 (519)
++.+|++++ +..+.+++ ++|+|||+||.... .+.++..+++|+.|+.++++.+.+.
T Consensus 68 ~~~~D~~~~-------~~~~~~~~~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~ 140 (278)
T 2bgk_A 68 FVHCDVTKD-------EDVRNLVDTTIAKHGKLDIMFGNVGVLSTTPYSILEAGNEDFKRVMDINVYGAFLVAKHAARVM 140 (278)
T ss_dssp EEECCTTCH-------HHHHHHHHHHHHHHSCCCEEEECCCCCCSSCSSTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHH
T ss_pred EEECCCCCH-------HHHHHHHHHHHHHcCCCCEEEECCcccCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHH
Confidence 999999953 32334433 79999999997532 1567788999999999999988653
Q ss_pred --cCCceEEEEecceeecCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCc
Q 010075 152 --VKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPN 229 (519)
Q Consensus 152 --~~l~~~V~vSTa~v~~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n 229 (519)
.+..++|++||..++.... ....
T Consensus 141 ~~~~~~~iv~isS~~~~~~~~-------------------------------------------------------~~~~ 165 (278)
T 2bgk_A 141 IPAKKGSIVFTASISSFTAGE-------------------------------------------------------GVSH 165 (278)
T ss_dssp GGGTCEEEEEECCGGGTCCCT-------------------------------------------------------TSCH
T ss_pred hhcCCCeEEEEeeccccCCCC-------------------------------------------------------CCCc
Confidence 2567999999987654211 1245
Q ss_pred HHHHHHHHHHHHHHHh-----hcCCcEEEEecCccccCCCCCCCcccccccccHHHHHHhhcCCceeeccCCCceeeeee
Q 010075 230 TYVFTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIP 304 (519)
Q Consensus 230 ~Y~~sK~~aE~lv~~~-----~~~lp~~IvRPs~V~g~~~~p~~gw~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~d~vp 304 (519)
.|+.||+..|.+++.+ ..+++++++|||.|+++......+ ...........+ .+.....+++
T Consensus 166 ~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~------~~~~~~~~~~~~-------~~~~~~~~~~ 232 (278)
T 2bgk_A 166 VYTATKHAVLGLTTSLCTELGEYGIRVNCVSPYIVASPLLTDVFG------VDSSRVEELAHQ-------AANLKGTLLR 232 (278)
T ss_dssp HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCCSCCCCTTSSS------CCHHHHHHHHHH-------TCSSCSCCCC
T ss_pred chHHHHHHHHHHHHHHHHHHhhcCcEEEEEEeceecchhhhhhcc------cchhHHHHhhhc-------ccccccccCC
Confidence 7999999999998865 258999999999999986532211 011111111111 1112345789
Q ss_pred HHHHHHHHHHHHHHhccCCCCCcEEEecCCCCCc
Q 010075 305 VDMVVNAMIVAMVAHAKQPSDANIYHVGSSLRNP 338 (519)
Q Consensus 305 VDdva~aii~a~~~~~~~~~~~~iyni~s~~~~~ 338 (519)
++|+|++++.++..... ...+++|++.+|...+
T Consensus 233 ~~dva~~~~~l~~~~~~-~~~G~~~~v~gg~~~~ 265 (278)
T 2bgk_A 233 AEDVADAVAYLAGDESK-YVSGLNLVIDGGYTRT 265 (278)
T ss_dssp HHHHHHHHHHHHSGGGT-TCCSCEEEESTTGGGC
T ss_pred HHHHHHHHHHHcCcccc-cCCCCEEEECCccccc
Confidence 99999999998864322 2237899999885433
|
| >1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.84 E-value=2.5e-20 Score=186.92 Aligned_cols=231 Identities=12% Similarity=0.150 Sum_probs=153.7
Q ss_pred CCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccH--HHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 010075 12 NKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSA--ALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (519)
Q Consensus 12 ~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~--~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (519)
.|+|+|||||||+|+++++.|++.| .+|++++|+...... .+.+. . + ...++++
T Consensus 4 ~~~ilVtGatG~iG~~l~~~L~~~g---~~V~~~~R~~~~~~~~~~~~~~-~---------~-----------~~~~~~~ 59 (313)
T 1qyd_A 4 KSRVLIVGGTGYIGKRIVNASISLG---HPTYVLFRPEVVSNIDKVQMLL-Y---------F-----------KQLGAKL 59 (313)
T ss_dssp CCCEEEESTTSTTHHHHHHHHHHTT---CCEEEECCSCCSSCHHHHHHHH-H---------H-----------HTTTCEE
T ss_pred CCEEEEEcCCcHHHHHHHHHHHhCC---CcEEEEECCCcccchhHHHHHH-H---------H-----------HhCCeEE
Confidence 4789999999999999999999988 578999998654321 11111 0 0 0257899
Q ss_pred EeccCCCCCCCCChhhhHHHHhcCccEEEEcCccCCccccHHHHHHHhHHHHHHHHHHHHhccCCceEEEEecceeecCc
Q 010075 90 VPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKFDERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAYVAGER 169 (519)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~~~vdiViH~Aa~v~f~~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V~vSTa~v~~~~ 169 (519)
+.+|+++ .+....+++++|+|||+|+..... .|+.++.+++++|++.+++++||+ | ++|..
T Consensus 60 ~~~D~~d-------~~~l~~~~~~~d~vi~~a~~~~~~--------~~~~~~~~l~~aa~~~g~v~~~v~-S---~~g~~ 120 (313)
T 1qyd_A 60 IEASLDD-------HQRLVDALKQVDVVISALAGGVLS--------HHILEQLKLVEAIKEAGNIKRFLP-S---EFGMD 120 (313)
T ss_dssp ECCCSSC-------HHHHHHHHTTCSEEEECCCCSSSS--------TTTTTHHHHHHHHHHSCCCSEEEC-S---CCSSC
T ss_pred EeCCCCC-------HHHHHHHHhCCCEEEECCccccch--------hhHHHHHHHHHHHHhcCCCceEEe-c---CCcCC
Confidence 9999995 344457788999999999976432 378899999999999733999985 3 23321
Q ss_pred CCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcHHHHHHHHHHHHHHHhhcCC
Q 010075 170 TGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLMQQSKENL 249 (519)
Q Consensus 170 ~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~Y~~sK~~aE~lv~~~~~~l 249 (519)
.... + .+. .+..+.| .+|..+|+++++ .++
T Consensus 121 ~~~~-~------~~~----------------------------------------~p~~~~y-~sK~~~e~~~~~--~g~ 150 (313)
T 1qyd_A 121 PDIM-E------HAL----------------------------------------QPGSITF-IDKRKVRRAIEA--ASI 150 (313)
T ss_dssp TTSC-C------CCC----------------------------------------SSTTHHH-HHHHHHHHHHHH--TTC
T ss_pred cccc-c------cCC----------------------------------------CCCcchH-HHHHHHHHHHHh--cCC
Confidence 1100 0 000 0113568 999999999986 589
Q ss_pred cEEEEecCccccCCCCCCCcccccccccHHHHHHhhcCCceeeccCCCceeeeeeHHHHHHHHHHHHHHhccCCCCCcEE
Q 010075 250 SLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMIVAMVAHAKQPSDANIY 329 (519)
Q Consensus 250 p~~IvRPs~V~g~~~~p~~gw~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~d~vpVDdva~aii~a~~~~~~~~~~~~iy 329 (519)
+++++||+.+++.....+..... .....+....++++++...++++++|+|++++.++..... .+++|
T Consensus 151 ~~~ilrp~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~g~~~~~~i~~~Dva~~~~~~l~~~~~---~~~~~ 218 (313)
T 1qyd_A 151 PYTYVSSNMFAGYFAGSLAQLDG---------HMMPPRDKVLIYGDGNVKGIWVDEDDVGTYTIKSIDDPQT---LNKTM 218 (313)
T ss_dssp CBCEEECCEEHHHHTTTSSCTTC---------CSSCCSSEECCBTTSCSEEEEECHHHHHHHHHHHTTCGGG---SSSEE
T ss_pred CeEEEEeceeccccccccccccc---------cccCCCCeEEEeCCCCceEEEEEHHHHHHHHHHHHhCccc---CCceE
Confidence 99999999998854321111000 0001122334567888999999999999999998864322 24677
Q ss_pred EecCC-CCCchhHHHHHHH
Q 010075 330 HVGSS-LRNPVTLGLQVAN 347 (519)
Q Consensus 330 ni~s~-~~~~i~~~~~~~~ 347 (519)
+++++ ...+...+...+.
T Consensus 219 ~~~g~~~~~s~~e~~~~~~ 237 (313)
T 1qyd_A 219 YIRPPMNILSQKEVIQIWE 237 (313)
T ss_dssp ECCCGGGEEEHHHHHHHHH
T ss_pred EEeCCCCccCHHHHHHHHH
Confidence 77643 3444333444443
|
| >4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A | Back alignment and structure |
|---|
Probab=99.84 E-value=3.7e-20 Score=181.43 Aligned_cols=227 Identities=21% Similarity=0.238 Sum_probs=155.4
Q ss_pred hcCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceE
Q 010075 9 FLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKIT 88 (519)
Q Consensus 9 ~~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~ 88 (519)
-++||+|+||||+|+||++++++|++.| .+|+++.|+... .+++. ++. ..++.
T Consensus 5 ~l~~k~vlVTGas~gIG~~ia~~l~~~G---~~V~~~~r~~~~---~~~~~-------------~~~--------~~~~~ 57 (259)
T 4e6p_A 5 RLEGKSALITGSARGIGRAFAEAYVREG---ATVAIADIDIER---ARQAA-------------AEI--------GPAAY 57 (259)
T ss_dssp TTTTCEEEEETCSSHHHHHHHHHHHHTT---CEEEEEESCHHH---HHHHH-------------HHH--------CTTEE
T ss_pred cCCCCEEEEECCCcHHHHHHHHHHHHCC---CEEEEEeCCHHH---HHHHH-------------HHh--------CCCce
Confidence 3678999999999999999999999998 678888886321 11111 111 25678
Q ss_pred EEeccCCCCCCCCChhhhHHHHhc-------CccEEEEcCccCCc-------cccHHHHHHHhHHHHHHHHHHHHhc---
Q 010075 89 FVPGDISSEDLGLKDSNLKEELWN-------ELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKC--- 151 (519)
Q Consensus 89 ~v~gDl~~~~lgls~~~~~~~l~~-------~vdiViH~Aa~v~f-------~~~~~~~~~~Nv~gt~~ll~~a~~~--- 151 (519)
++.+|++++ +..+.+++ ++|+|||+||.... .+.++..+++|+.|+.++++.+.+.
T Consensus 58 ~~~~D~~~~-------~~v~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~ 130 (259)
T 4e6p_A 58 AVQMDVTRQ-------DSIDAAIAATVEHAGGLDILVNNAALFDLAPIVEITRESYEKLFAINVAGTLFTLQAAARQMIA 130 (259)
T ss_dssp EEECCTTCH-------HHHHHHHHHHHHHSSSCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHH
T ss_pred EEEeeCCCH-------HHHHHHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHh
Confidence 999999953 32334433 79999999998542 2567888999999999999987543
Q ss_pred -cCCceEEEEecceeecCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcH
Q 010075 152 -VKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNT 230 (519)
Q Consensus 152 -~~l~~~V~vSTa~v~~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~ 230 (519)
+.-.++|++||...+... .....
T Consensus 131 ~~~~g~iv~isS~~~~~~~--------------------------------------------------------~~~~~ 154 (259)
T 4e6p_A 131 QGRGGKIINMASQAGRRGE--------------------------------------------------------ALVAI 154 (259)
T ss_dssp HTSCEEEEEECCGGGTSCC--------------------------------------------------------TTBHH
T ss_pred cCCCeEEEEECChhhccCC--------------------------------------------------------CCChH
Confidence 124689999998654311 22457
Q ss_pred HHHHHHHHHHHHHHh-----hcCCcEEEEecCccccCCCCCCCcccccccccHHHHHHhh---cCCceeeccCCCceeee
Q 010075 231 YVFTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASA---QGNLRCLVGETKVIMDV 302 (519)
Q Consensus 231 Y~~sK~~aE~lv~~~-----~~~lp~~IvRPs~V~g~~~~p~~gw~~~~~~~~~~i~~~~---~g~~~~~~~~~~~~~d~ 302 (519)
|+.||+..|.+.+.+ ..++++..++||.|.++..... ..++.... .+......++......+
T Consensus 155 Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~p~~r~ 224 (259)
T 4e6p_A 155 YCATKAAVISLTQSAGLDLIKHRINVNAIAPGVVDGEHWDGV----------DALFARYENRPRGEKKRLVGEAVPFGRM 224 (259)
T ss_dssp HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSTTHHHH----------HHHHHHHHTCCTTHHHHHHHHHSTTSSC
T ss_pred HHHHHHHHHHHHHHHHHHhhhcCCEEEEEEECCCccchhhhh----------hhhhhhhccCChHHHHHHHhccCCCCCC
Confidence 999999999998865 3489999999999988753211 00111110 11111112222345678
Q ss_pred eeHHHHHHHHHHHHHHhccCCCCCcEEEecCCCC
Q 010075 303 IPVDMVVNAMIVAMVAHAKQPSDANIYHVGSSLR 336 (519)
Q Consensus 303 vpVDdva~aii~a~~~~~~~~~~~~iyni~s~~~ 336 (519)
.+++|+|++++.++..... .-.+++|++.+|..
T Consensus 225 ~~~~dva~~v~~L~s~~~~-~itG~~i~vdgG~~ 257 (259)
T 4e6p_A 225 GTAEDLTGMAIFLASAESD-YIVSQTYNVDGGNW 257 (259)
T ss_dssp BCTHHHHHHHHHTTSGGGT-TCCSCEEEESTTSS
T ss_pred cCHHHHHHHHHHHhCCccC-CCCCCEEEECcChh
Confidence 9999999999888753322 22378999998844
|
| >3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans} | Back alignment and structure |
|---|
Probab=99.84 E-value=7.9e-20 Score=178.61 Aligned_cols=224 Identities=16% Similarity=0.147 Sum_probs=153.5
Q ss_pred cCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 010075 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (519)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (519)
+++|+|+||||||+||++++++|++.| .+|+++.|+... .+++. +.+++. ..++.+
T Consensus 11 l~~k~vlItGasggiG~~la~~l~~~G---~~V~~~~r~~~~---~~~~~---------~~l~~~---------~~~~~~ 66 (260)
T 3awd_A 11 LDNRVAIVTGGAQNIGLACVTALAEAG---ARVIIADLDEAM---ATKAV---------EDLRME---------GHDVSS 66 (260)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTT---CEEEEEESCHHH---HHHHH---------HHHHHT---------TCCEEE
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCC---CEEEEEeCCHHH---HHHHH---------HHHHhc---------CCceEE
Confidence 578999999999999999999999998 678999886422 11111 111111 256899
Q ss_pred EeccCCCCCCCCChhhhHHHHh-------cCccEEEEcCccCC-c-------cccHHHHHHHhHHHHHHHHHHHHhc---
Q 010075 90 VPGDISSEDLGLKDSNLKEELW-------NELDIMVNSAAITK-F-------DERYDVAFGINTLGVIHLVNFAKKC--- 151 (519)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~-------~~vdiViH~Aa~v~-f-------~~~~~~~~~~Nv~gt~~ll~~a~~~--- 151 (519)
+.+|++++ +..+.++ .++|+|||+||... . .+.++..+++|+.|+.++++.+.+.
T Consensus 67 ~~~D~~~~-------~~~~~~~~~~~~~~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~ 139 (260)
T 3awd_A 67 VVMDVTNT-------ESVQNAVRSVHEQEGRVDILVACAGICISEVKAEDMTDGQWLKQVDINLNGMFRSCQAVGRIMLE 139 (260)
T ss_dssp EECCTTCH-------HHHHHHHHHHHHHHSCCCEEEECCCCCCCSCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHH
T ss_pred EEecCCCH-------HHHHHHHHHHHHHcCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHhccHHHHHHHHHHHHHHhh
Confidence 99999953 2223433 37999999999654 1 2456788999999999999887642
Q ss_pred cCCceEEEEecceeecCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcHH
Q 010075 152 VKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTY 231 (519)
Q Consensus 152 ~~l~~~V~vSTa~v~~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~Y 231 (519)
.+..++|++||.+.+.... ..+...|
T Consensus 140 ~~~~~iv~~sS~~~~~~~~------------------------------------------------------~~~~~~Y 165 (260)
T 3awd_A 140 QKQGVIVAIGSMSGLIVNR------------------------------------------------------PQQQAAY 165 (260)
T ss_dssp HTCEEEEEECCGGGTSCCS------------------------------------------------------SSCCHHH
T ss_pred cCCCEEEEEecchhcccCC------------------------------------------------------CCCcccc
Confidence 2568999999986543210 0123679
Q ss_pred HHHHHHHHHHHHHh-----hcCCcEEEEecCccccCCCCCCCcccccccccHHHHHHhhcCCceeeccCCCceeeeeeHH
Q 010075 232 VFTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVD 306 (519)
Q Consensus 232 ~~sK~~aE~lv~~~-----~~~lp~~IvRPs~V~g~~~~p~~gw~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~d~vpVD 306 (519)
+.||+..|.+++.+ ..+++++++||+.|+++...+ .+ . ...+......+. ....+++++
T Consensus 166 ~~sK~a~~~~~~~l~~e~~~~gi~v~~v~pg~v~t~~~~~--~~----~-~~~~~~~~~~~~---------~~~~~~~~~ 229 (260)
T 3awd_A 166 NASKAGVHQYIRSLAAEWAPHGIRANAVAPTYIETTLTRF--GM----E-KPELYDAWIAGT---------PMGRVGQPD 229 (260)
T ss_dssp HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCTTTHH--HH----T-CHHHHHHHHHTC---------TTSSCBCHH
T ss_pred HHHHHHHHHHHHHHHHHhhhcCeEEEEEEeeeeccchhhc--cc----C-ChHHHHHHHhcC---------CcCCCCCHH
Confidence 99999999998865 258999999999999875420 00 0 011222222211 123478999
Q ss_pred HHHHHHHHHHHHhccCCCCCcEEEecCCC
Q 010075 307 MVVNAMIVAMVAHAKQPSDANIYHVGSSL 335 (519)
Q Consensus 307 dva~aii~a~~~~~~~~~~~~iyni~s~~ 335 (519)
|+|++++.++..... ...+++|++.+|.
T Consensus 230 dva~~~~~l~~~~~~-~~~G~~~~v~gg~ 257 (260)
T 3awd_A 230 EVASVVQFLASDAAS-LMTGAIVNVDAGF 257 (260)
T ss_dssp HHHHHHHHHHSGGGT-TCCSCEEEESTTT
T ss_pred HHHHHHHHHhCchhc-cCCCcEEEECCce
Confidence 999999988864322 2236899998873
|
| >2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa} | Back alignment and structure |
|---|
Probab=99.83 E-value=5.7e-20 Score=183.86 Aligned_cols=228 Identities=13% Similarity=0.136 Sum_probs=148.8
Q ss_pred CCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecC-CcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEE
Q 010075 12 NKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAA-DIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFV 90 (519)
Q Consensus 12 ~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~-~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v 90 (519)
+|+|+|||||||+|+++++.|++.| .+|++++|+. ....+.++.. .+ ..+. ..+++++
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~~g---~~V~~~~R~~~~~~~~~~~~~-~~------~~l~-----------~~~v~~v 60 (307)
T 2gas_A 2 ENKILILGPTGAIGRHIVWASIKAG---NPTYALVRKTITAANPETKEE-LI------DNYQ-----------SLGVILL 60 (307)
T ss_dssp CCCEEEESTTSTTHHHHHHHHHHHT---CCEEEEECCSCCSSCHHHHHH-HH------HHHH-----------HTTCEEE
T ss_pred CcEEEEECCCchHHHHHHHHHHhCC---CcEEEEECCCcccCChHHHHH-HH------HHHH-----------hCCCEEE
Confidence 5789999999999999999999998 5778999986 2221101111 00 0000 1468899
Q ss_pred eccCCCCCCCCChhhhHHHHhcCccEEEEcCccCCccccHHHHHHHhHHHHHHHHHHHHhccCCceEEEEecceeecCcC
Q 010075 91 PGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKFDERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAYVAGERT 170 (519)
Q Consensus 91 ~gDl~~~~lgls~~~~~~~l~~~vdiViH~Aa~v~f~~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V~vSTa~v~~~~~ 170 (519)
.+|+++ .+....+++++|+|||+|+... +.++.+++++|++.+++++||+ |+ +|...
T Consensus 61 ~~D~~d-------~~~l~~~~~~~d~vi~~a~~~~------------~~~~~~l~~aa~~~g~v~~~v~-S~---~g~~~ 117 (307)
T 2gas_A 61 EGDIND-------HETLVKAIKQVDIVICAAGRLL------------IEDQVKIIKAIKEAGNVKKFFP-SE---FGLDV 117 (307)
T ss_dssp ECCTTC-------HHHHHHHHTTCSEEEECSSSSC------------GGGHHHHHHHHHHHCCCSEEEC-SC---CSSCT
T ss_pred EeCCCC-------HHHHHHHHhCCCEEEECCcccc------------cccHHHHHHHHHhcCCceEEee-cc---cccCc
Confidence 999995 3444578889999999999754 4577899999998733899983 32 33211
Q ss_pred CeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcHHHHHHHHHHHHHHHhhcCCc
Q 010075 171 GLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLMQQSKENLS 250 (519)
Q Consensus 171 ~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~Y~~sK~~aE~lv~~~~~~lp 250 (519)
+|. .+.. +..+.| .+|+.+|+++++ .+++
T Consensus 118 ---~~~-----~~~~----------------------------------------p~~~~y-~sK~~~e~~~~~--~~i~ 146 (307)
T 2gas_A 118 ---DRH-----DAVE----------------------------------------PVRQVF-EEKASIRRVIEA--EGVP 146 (307)
T ss_dssp ---TSC-----CCCT----------------------------------------THHHHH-HHHHHHHHHHHH--HTCC
T ss_pred ---ccc-----cCCC----------------------------------------cchhHH-HHHHHHHHHHHH--cCCC
Confidence 110 0100 112478 999999999986 5799
Q ss_pred EEEEecCccccCCCCCCCcccccccccHHHHHHhhcCCceeeccCCCceeeeeeHHHHHHHHHHHHHHhccCCCCCcEEE
Q 010075 251 LVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMIVAMVAHAKQPSDANIYH 330 (519)
Q Consensus 251 ~~IvRPs~V~g~~~~p~~gw~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~d~vpVDdva~aii~a~~~~~~~~~~~~iyn 330 (519)
++++||+.+++.... .+.... .....+....++++++...++++++|+|++++.++..... .+++|+
T Consensus 147 ~~~lrp~~~~~~~~~---~~~~~~-------~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~l~~~~~---~~~~~~ 213 (307)
T 2gas_A 147 YTYLCCHAFTGYFLR---NLAQLD-------ATDPPRDKVVILGDGNVKGAYVTEADVGTFTIRAANDPNT---LNKAVH 213 (307)
T ss_dssp BEEEECCEETTTTGG---GTTCTT-------CSSCCSSEEEEETTSCSEEEEECHHHHHHHHHHHHTCGGG---TTEEEE
T ss_pred eEEEEcceeeccccc---cccccc-------cccCCCCeEEEecCCCcceEEeeHHHHHHHHHHHHcCccc---cCceEE
Confidence 999999999885431 111100 0001122334567888899999999999999999864322 246777
Q ss_pred ecC-CCCCchhHHHHHHH
Q 010075 331 VGS-SLRNPVTLGLQVAN 347 (519)
Q Consensus 331 i~s-~~~~~i~~~~~~~~ 347 (519)
+++ +...+...+...+.
T Consensus 214 ~~~~~~~~s~~e~~~~~~ 231 (307)
T 2gas_A 214 IRLPKNYLTQNEVIALWE 231 (307)
T ss_dssp CCCGGGEEEHHHHHHHHH
T ss_pred EeCCCCcCCHHHHHHHHH
Confidence 754 33444433444443
|
| >3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A* | Back alignment and structure |
|---|
Probab=99.83 E-value=1.6e-19 Score=172.29 Aligned_cols=202 Identities=15% Similarity=0.183 Sum_probs=139.7
Q ss_pred CEEEEeCCccHHHHHHHHHHH-HhCCCccEEEEEEecCC-cccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEE
Q 010075 13 KTILVSGVTGFVAKVFIEKIL-RVQPNVKKLYLFVRAAD-IDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFV 90 (519)
Q Consensus 13 k~VlITGaTGFlG~~Lv~~LL-~~g~~v~~V~~LvR~~~-~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v 90 (519)
|+|+||||||+||+++++.|+ +.| .+|+++.|+.. .... +. . ...++.++
T Consensus 6 k~vlVtGasg~iG~~~~~~l~~~~g---~~V~~~~r~~~~~~~~---~~-------------~---------~~~~~~~~ 57 (221)
T 3r6d_A 6 XYITILGAAGQIAQXLTATLLTYTD---MHITLYGRQLKTRIPP---EI-------------I---------DHERVTVI 57 (221)
T ss_dssp SEEEEESTTSHHHHHHHHHHHHHCC---CEEEEEESSHHHHSCH---HH-------------H---------TSTTEEEE
T ss_pred EEEEEEeCCcHHHHHHHHHHHhcCC---ceEEEEecCccccchh---hc-------------c---------CCCceEEE
Confidence 579999999999999999999 777 68899999743 2111 10 0 13678999
Q ss_pred eccCCCCCCCCChhhhHHHHhcCccEEEEcCccCCccccHHHHHHHhHHHHHHHHHHHHhccCCceEEEEecceeecCcC
Q 010075 91 PGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKFDERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAYVAGERT 170 (519)
Q Consensus 91 ~gDl~~~~lgls~~~~~~~l~~~vdiViH~Aa~v~f~~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V~vSTa~v~~~~~ 170 (519)
.+|+++ .+....+++++|+|||+|+.. |+. ++++++.+++. +.++||++||..+++...
T Consensus 58 ~~D~~d-------~~~~~~~~~~~d~vv~~ag~~------------n~~-~~~~~~~~~~~-~~~~iv~iSs~~~~~~~~ 116 (221)
T 3r6d_A 58 EGSFQN-------PGXLEQAVTNAEVVFVGAMES------------GSD-MASIVKALSRX-NIRRVIGVSMAGLSGEFP 116 (221)
T ss_dssp ECCTTC-------HHHHHHHHTTCSEEEESCCCC------------HHH-HHHHHHHHHHT-TCCEEEEEEETTTTSCSC
T ss_pred ECCCCC-------HHHHHHHHcCCCEEEEcCCCC------------Chh-HHHHHHHHHhc-CCCeEEEEeeceecCCCC
Confidence 999994 444557888999999999863 455 89999999885 788999999998876422
Q ss_pred CeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcHHHHHHHHHHHHHHHhhcCCc
Q 010075 171 GLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLMQQSKENLS 250 (519)
Q Consensus 171 ~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~Y~~sK~~aE~lv~~~~~~lp 250 (519)
+... .. . .....+.|+.+|..+|.+++. .+++
T Consensus 117 ~~~~-------------~~---~------------------------------~~~~~~~y~~~K~~~e~~~~~--~~i~ 148 (221)
T 3r6d_A 117 VALE-------------KW---T------------------------------FDNLPISYVQGERQARNVLRE--SNLN 148 (221)
T ss_dssp HHHH-------------HH---H------------------------------HHTSCHHHHHHHHHHHHHHHH--SCSE
T ss_pred cccc-------------cc---c------------------------------ccccccHHHHHHHHHHHHHHh--CCCC
Confidence 1000 00 0 002234899999999999986 6899
Q ss_pred EEEEecCccccCCCCCCCcccccccccHHHHHHhhcCCceeeccCCCceeeeeeHHHHHHHHHHHH--HHhccCCCCCcE
Q 010075 251 LVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMIVAM--VAHAKQPSDANI 328 (519)
Q Consensus 251 ~~IvRPs~V~g~~~~p~~gw~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~d~vpVDdva~aii~a~--~~~~~~~~~~~i 328 (519)
++++|||.++++... +. .............+++.+|+|++++.++ .....- .++.
T Consensus 149 ~~~vrpg~v~~~~~~---~~------------------~~~~~~~~~~~~~~~~~~dvA~~~~~l~~~~~~~~~--~~~~ 205 (221)
T 3r6d_A 149 YTILRLTWLYNDPEX---TD------------------YELIPEGAQFNDAQVSREAVVKAIFDILHAADETPF--HRTS 205 (221)
T ss_dssp EEEEEECEEECCTTC---CC------------------CEEECTTSCCCCCEEEHHHHHHHHHHHHTCSCCGGG--TTEE
T ss_pred EEEEechhhcCCCCC---cc------------------eeeccCCccCCCceeeHHHHHHHHHHHHHhcChhhh--hcce
Confidence 999999999886221 10 0000011111123799999999999998 543221 2456
Q ss_pred EEecCC
Q 010075 329 YHVGSS 334 (519)
Q Consensus 329 yni~s~ 334 (519)
+.++.+
T Consensus 206 ~~i~~~ 211 (221)
T 3r6d_A 206 IGVGEP 211 (221)
T ss_dssp EEEECT
T ss_pred eeecCC
Confidence 666644
|
| >2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A* | Back alignment and structure |
|---|
Probab=99.83 E-value=3.2e-19 Score=173.63 Aligned_cols=220 Identities=14% Similarity=0.126 Sum_probs=149.9
Q ss_pred cCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCce-E
Q 010075 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKI-T 88 (519)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v-~ 88 (519)
+++|+|+||||||+||++++++|++.| .+|+++.|+... .+.+.+ +. ..++ .
T Consensus 9 ~~~k~vlITGasggiG~~la~~l~~~G---~~V~~~~r~~~~---~~~~~~-------------~~--------~~~~~~ 61 (254)
T 2wsb_A 9 LDGACAAVTGAGSGIGLEICRAFAASG---ARLILIDREAAA---LDRAAQ-------------EL--------GAAVAA 61 (254)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTT---CEEEEEESCHHH---HHHHHH-------------HH--------GGGEEE
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCC---CEEEEEeCCHHH---HHHHHH-------------Hh--------ccccee
Confidence 678999999999999999999999998 678999986421 111111 11 1345 8
Q ss_pred EEeccCCCCCCCCChhhhHHHHh------cCccEEEEcCccCCc-------cccHHHHHHHhHHHHHHHHHHHHhc---c
Q 010075 89 FVPGDISSEDLGLKDSNLKEELW------NELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKC---V 152 (519)
Q Consensus 89 ~v~gDl~~~~lgls~~~~~~~l~------~~vdiViH~Aa~v~f-------~~~~~~~~~~Nv~gt~~ll~~a~~~---~ 152 (519)
++.+|++++ +..+.++ .++|+|||+||.... .+.++..+++|+.|+.++++.+.+. .
T Consensus 62 ~~~~D~~~~-------~~~~~~~~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~ 134 (254)
T 2wsb_A 62 RIVADVTDA-------EAMTAAAAEAEAVAPVSILVNSAGIARLHDALETDDATWRQVMAVNVDGMFWASRAFGRAMVAR 134 (254)
T ss_dssp EEECCTTCH-------HHHHHHHHHHHHHSCCCEEEECCCCCCCBCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH
T ss_pred EEEEecCCH-------HHHHHHHHHHHhhCCCcEEEECCccCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc
Confidence 899999953 2223333 579999999997543 2456788999999988777765321 2
Q ss_pred CCceEEEEecceeecCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcHHH
Q 010075 153 KLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYV 232 (519)
Q Consensus 153 ~l~~~V~vSTa~v~~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~Y~ 232 (519)
+.++||++||...+.... ..+...|+
T Consensus 135 ~~~~iv~isS~~~~~~~~------------------------------------------------------~~~~~~Y~ 160 (254)
T 2wsb_A 135 GAGAIVNLGSMSGTIVNR------------------------------------------------------PQFASSYM 160 (254)
T ss_dssp TCEEEEEECCGGGTSCCS------------------------------------------------------SSCBHHHH
T ss_pred CCcEEEEEecchhccCCC------------------------------------------------------CCcchHHH
Confidence 578999999986543211 02236899
Q ss_pred HHHHHHHHHHHHh-----hcCCcEEEEecCccccCCCCCCCcccccccccHHHHHHhhcCCceeeccCCCceeeeeeHHH
Q 010075 233 FTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDM 307 (519)
Q Consensus 233 ~sK~~aE~lv~~~-----~~~lp~~IvRPs~V~g~~~~p~~gw~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~d~vpVDd 307 (519)
.||+..|.+++.+ ..+++++++|||.|+++.....+ ...........+. ....+++++|
T Consensus 161 ~sK~a~~~~~~~~~~~~~~~gi~v~~v~Pg~v~t~~~~~~~-------~~~~~~~~~~~~~---------~~~~~~~~~d 224 (254)
T 2wsb_A 161 ASKGAVHQLTRALAAEWAGRGVRVNALAPGYVATEMTLKMR-------ERPELFETWLDMT---------PMGRCGEPSE 224 (254)
T ss_dssp HHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSHHHHHHH-------TCHHHHHHHHHTS---------TTSSCBCHHH
T ss_pred HHHHHHHHHHHHHHHHHhhcCeEEEEEEecccCchhhhccc-------cChHHHHHHHhcC---------CCCCCCCHHH
Confidence 9999999998765 34899999999999886432110 0011222221111 1235789999
Q ss_pred HHHHHHHHHHHhccCCCCCcEEEecCC
Q 010075 308 VVNAMIVAMVAHAKQPSDANIYHVGSS 334 (519)
Q Consensus 308 va~aii~a~~~~~~~~~~~~iyni~s~ 334 (519)
+|++++.++..... ...++++++.+|
T Consensus 225 va~~~~~l~~~~~~-~~~G~~~~v~gG 250 (254)
T 2wsb_A 225 IAAAALFLASPAAS-YVTGAILAVDGG 250 (254)
T ss_dssp HHHHHHHHHSGGGT-TCCSCEEEESTT
T ss_pred HHHHHHHHhCcccc-cccCCEEEECCC
Confidence 99999998864322 223689999877
|
| >3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A} | Back alignment and structure |
|---|
Probab=99.83 E-value=4e-19 Score=171.49 Aligned_cols=205 Identities=13% Similarity=0.132 Sum_probs=135.9
Q ss_pred CCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEE
Q 010075 11 ENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFV 90 (519)
Q Consensus 11 ~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v 90 (519)
..|+|||||||||||+++++.|++.|. .+|+++.|+..... .....++.++
T Consensus 22 ~mk~vlVtGatG~iG~~l~~~L~~~G~--~~V~~~~R~~~~~~---------------------------~~~~~~~~~~ 72 (236)
T 3qvo_A 22 HMKNVLILGAGGQIARHVINQLADKQT--IKQTLFARQPAKIH---------------------------KPYPTNSQII 72 (236)
T ss_dssp CCEEEEEETTTSHHHHHHHHHHTTCTT--EEEEEEESSGGGSC---------------------------SSCCTTEEEE
T ss_pred cccEEEEEeCCcHHHHHHHHHHHhCCC--ceEEEEEcChhhhc---------------------------ccccCCcEEE
Confidence 457899999999999999999999873 47899999753321 1123578999
Q ss_pred eccCCCCCCCCChhhhHHHHhcCccEEEEcCccCCccccHHHHHHHhHHHHHHHHHHHHhccCCceEEEEecceeecCcC
Q 010075 91 PGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKFDERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAYVAGERT 170 (519)
Q Consensus 91 ~gDl~~~~lgls~~~~~~~l~~~vdiViH~Aa~v~f~~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V~vSTa~v~~~~~ 170 (519)
.+|+++ .+..+.+++++|+|||+|+...+ ...++++++++++. +.++||++||..+++...
T Consensus 73 ~~Dl~d-------~~~~~~~~~~~D~vv~~a~~~~~-----------~~~~~~~~~~~~~~-~~~~iV~iSS~~~~~~~~ 133 (236)
T 3qvo_A 73 MGDVLN-------HAALKQAMQGQDIVYANLTGEDL-----------DIQANSVIAAMKAC-DVKRLIFVLSLGIYDEVP 133 (236)
T ss_dssp ECCTTC-------HHHHHHHHTTCSEEEEECCSTTH-----------HHHHHHHHHHHHHT-TCCEEEEECCCCC-----
T ss_pred EecCCC-------HHHHHHHhcCCCEEEEcCCCCch-----------hHHHHHHHHHHHHc-CCCEEEEEecceecCCCC
Confidence 999994 44456888899999999986332 13567899999885 789999999999887543
Q ss_pred CeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcHHHHHHHHHHHHHHHhhcCCc
Q 010075 171 GLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLMQQSKENLS 250 (519)
Q Consensus 171 ~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~Y~~sK~~aE~lv~~~~~~lp 250 (519)
+... .+.+ ..+..+...|..+|..+.. .+++
T Consensus 134 ~~~~--~~~~---------------------------------------------~~~~~~~~~~~~~~~~l~~--~gi~ 164 (236)
T 3qvo_A 134 GKFV--EWNN---------------------------------------------AVIGEPLKPFRRAADAIEA--SGLE 164 (236)
T ss_dssp ----------------------------------------------------------CGGGHHHHHHHHHHHT--SCSE
T ss_pred cccc--cchh---------------------------------------------hcccchHHHHHHHHHHHHH--CCCC
Confidence 2100 0000 0111223344455666554 6899
Q ss_pred EEEEecCccccCCCCCCCcccccccccHHHHHHhhcCCceeeccCCCceeeeeeHHHHHHHHHHHHHHhccCCCCCcEEE
Q 010075 251 LVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMIVAMVAHAKQPSDANIYH 330 (519)
Q Consensus 251 ~~IvRPs~V~g~~~~p~~gw~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~d~vpVDdva~aii~a~~~~~~~~~~~~iyn 330 (519)
++++|||.++++..... . ...........+++++|||++++.++..... ..+++|+
T Consensus 165 ~~~vrPg~i~~~~~~~~---~-------------------~~~~~~~~~~~~i~~~DvA~~i~~ll~~~~~--~~g~~~~ 220 (236)
T 3qvo_A 165 YTILRPAWLTDEDIIDY---E-------------------LTSRNEPFKGTIVSRKSVAALITDIIDKPEK--HIGENIG 220 (236)
T ss_dssp EEEEEECEEECCSCCCC---E-------------------EECTTSCCSCSEEEHHHHHHHHHHHHHSTTT--TTTEEEE
T ss_pred EEEEeCCcccCCCCcce---E-------------------EeccCCCCCCcEECHHHHHHHHHHHHcCccc--ccCeeEE
Confidence 99999999998643211 0 0001111123589999999999999975432 2368999
Q ss_pred ecCCCC
Q 010075 331 VGSSLR 336 (519)
Q Consensus 331 i~s~~~ 336 (519)
++++..
T Consensus 221 i~~~~~ 226 (236)
T 3qvo_A 221 INQPGT 226 (236)
T ss_dssp EECSSC
T ss_pred ecCCCC
Confidence 988754
|
| >2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A* | Back alignment and structure |
|---|
Probab=99.83 E-value=3.4e-19 Score=172.74 Aligned_cols=220 Identities=16% Similarity=0.146 Sum_probs=149.8
Q ss_pred cCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 010075 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (519)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (519)
+++|+|+||||||+||++++++|++.| .+|+++.|+... .+.+.++ +.+.. ..++.+
T Consensus 5 ~~~~~vlVtGasggiG~~la~~l~~~G---~~V~~~~r~~~~---~~~~~~~---------~~~~~--------~~~~~~ 61 (248)
T 2pnf_A 5 LQGKVSLVTGSTRGIGRAIAEKLASAG---STVIITGTSGER---AKAVAEE---------IANKY--------GVKAHG 61 (248)
T ss_dssp CTTCEEEETTCSSHHHHHHHHHHHHTT---CEEEEEESSHHH---HHHHHHH---------HHHHH--------CCCEEE
T ss_pred cCCCEEEEECCCchHHHHHHHHHHHCC---CEEEEEeCChHH---HHHHHHH---------HHhhc--------CCceEE
Confidence 578999999999999999999999998 678999986421 1222111 11111 246889
Q ss_pred EeccCCCCCCCCChhhhHHHHhc-------CccEEEEcCccCCc-------cccHHHHHHHhHHHHHHHHHHHHhc---c
Q 010075 90 VPGDISSEDLGLKDSNLKEELWN-------ELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKC---V 152 (519)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~~-------~vdiViH~Aa~v~f-------~~~~~~~~~~Nv~gt~~ll~~a~~~---~ 152 (519)
+.+|+++ .+..+.+++ ++|+|||+||.... .+.++..+++|+.|+.++++.+.+. .
T Consensus 62 ~~~D~~~-------~~~~~~~~~~~~~~~~~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~ 134 (248)
T 2pnf_A 62 VEMNLLS-------EESINKAFEEIYNLVDGIDILVNNAGITRDKLFLRMSLLDWEEVLKVNLTGTFLVTQNSLRKMIKQ 134 (248)
T ss_dssp EECCTTC-------HHHHHHHHHHHHHHSSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHCHHHHHH
T ss_pred EEccCCC-------HHHHHHHHHHHHHhcCCCCEEEECCCCCCCCccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhc
Confidence 9999995 333334443 79999999997642 2457788999999997776655321 2
Q ss_pred CCceEEEEecceeecCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcHHH
Q 010075 153 KLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYV 232 (519)
Q Consensus 153 ~l~~~V~vSTa~v~~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~Y~ 232 (519)
+.++||++||....... .....|+
T Consensus 135 ~~~~iv~~sS~~~~~~~--------------------------------------------------------~~~~~Y~ 158 (248)
T 2pnf_A 135 RWGRIVNISSVVGFTGN--------------------------------------------------------VGQVNYS 158 (248)
T ss_dssp TCEEEEEECCHHHHHCC--------------------------------------------------------TTCHHHH
T ss_pred CCcEEEEEccHHhcCCC--------------------------------------------------------CCCchHH
Confidence 67899999997543211 1235799
Q ss_pred HHHHHHHHHHHHh-----hcCCcEEEEecCccccCCCCCCCcccccccccHHHHHHhhcCCceeeccCCCceeeeeeHHH
Q 010075 233 FTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDM 307 (519)
Q Consensus 233 ~sK~~aE~lv~~~-----~~~lp~~IvRPs~V~g~~~~p~~gw~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~d~vpVDd 307 (519)
.||+..|.+++.+ ..+++++++||+.|.++.....+ .........+. ....+++++|
T Consensus 159 ~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~v~t~~~~~~~---------~~~~~~~~~~~---------~~~~~~~~~d 220 (248)
T 2pnf_A 159 TTKAGLIGFTKSLAKELAPRNVLVNAVAPGFIETDMTAVLS---------EEIKQKYKEQI---------PLGRFGSPEE 220 (248)
T ss_dssp HHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCGGGGGSC---------HHHHHHHHHTC---------TTSSCBCHHH
T ss_pred HHHHHHHHHHHHHHHHhcccCeEEEEEEeceecCchhhhcc---------HHHHHHHHhcC---------CCCCccCHHH
Confidence 9999999888765 34799999999999876542111 11111111111 1235789999
Q ss_pred HHHHHHHHHHHhccCCCCCcEEEecCC
Q 010075 308 VVNAMIVAMVAHAKQPSDANIYHVGSS 334 (519)
Q Consensus 308 va~aii~a~~~~~~~~~~~~iyni~s~ 334 (519)
+|++++.++..... ...+++|++++|
T Consensus 221 va~~~~~l~~~~~~-~~~G~~~~v~gg 246 (248)
T 2pnf_A 221 VANVVLFLCSELAS-YITGEVIHVNGG 246 (248)
T ss_dssp HHHHHHHHHSGGGT-TCCSCEEEESTT
T ss_pred HHHHHHHHhCchhh-cCCCcEEEeCCC
Confidence 99999998864322 223789999876
|
| >1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.82 E-value=1.8e-19 Score=177.31 Aligned_cols=228 Identities=14% Similarity=0.126 Sum_probs=152.7
Q ss_pred cCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 010075 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (519)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (519)
+++|+|+||||||+||++++++|++.| .+|+++.|.... ..+.+.+ .+++ ...++.+
T Consensus 19 ~~~k~vlItGasggiG~~la~~l~~~G---~~v~~~~r~~~~--~~~~~~~---------~l~~---------~~~~~~~ 75 (274)
T 1ja9_A 19 LAGKVALTTGAGRGIGRGIAIELGRRG---ASVVVNYGSSSK--AAEEVVA---------ELKK---------LGAQGVA 75 (274)
T ss_dssp TTTCEEEETTTTSHHHHHHHHHHHHTT---CEEEEEESSCHH--HHHHHHH---------HHHH---------TTCCEEE
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCC---CEEEEEcCCchH--HHHHHHH---------HHHh---------cCCcEEE
Confidence 678999999999999999999999998 678898884211 1122211 1111 0256889
Q ss_pred EeccCCCCCCCCChhhhHHHHhc-------CccEEEEcCccCCc-------cccHHHHHHHhHHHHHHHHHHHHhc-cCC
Q 010075 90 VPGDISSEDLGLKDSNLKEELWN-------ELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKC-VKL 154 (519)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~~-------~vdiViH~Aa~v~f-------~~~~~~~~~~Nv~gt~~ll~~a~~~-~~l 154 (519)
+.+|+++ .+..+.+++ ++|+|||+||.... .+.++..+++|+.|+.++++.+.+. .+-
T Consensus 76 ~~~D~~~-------~~~~~~~~~~~~~~~~~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~ 148 (274)
T 1ja9_A 76 IQADISK-------PSEVVALFDKAVSHFGGLDFVMSNSGMEVWCDELEVTQELFDKVFNLNTRGQFFVAQQGLKHCRRG 148 (274)
T ss_dssp EECCTTS-------HHHHHHHHHHHHHHHSCEEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHEEEE
T ss_pred EEecCCC-------HHHHHHHHHHHHHHcCCCCEEEECCCCCCCcccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhC
Confidence 9999995 333334443 79999999997542 2456788999999999999988764 111
Q ss_pred ceEEEEecceee-cCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcHHHH
Q 010075 155 KVFVHVSTAYVA-GERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVF 233 (519)
Q Consensus 155 ~~~V~vSTa~v~-~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~Y~~ 233 (519)
.+||++||...+ ... .....|+.
T Consensus 149 ~~iv~~sS~~~~~~~~--------------------------------------------------------~~~~~Y~~ 172 (274)
T 1ja9_A 149 GRIILTSSIAAVMTGI--------------------------------------------------------PNHALYAG 172 (274)
T ss_dssp EEEEEECCGGGTCCSC--------------------------------------------------------CSCHHHHH
T ss_pred CEEEEEcChHhccCCC--------------------------------------------------------CCCchHHH
Confidence 699999998765 211 12357999
Q ss_pred HHHHHHHHHHHh-----hcCCcEEEEecCccccCCCCC-----CCcccccccccHHHHHHhhcCCceeeccCCCceeeee
Q 010075 234 TKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEP-----FPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVI 303 (519)
Q Consensus 234 sK~~aE~lv~~~-----~~~lp~~IvRPs~V~g~~~~p-----~~gw~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~d~v 303 (519)
||+..|.+++.+ ..+++++++|||.|.++...+ .++...... .......... +....+++
T Consensus 173 sK~a~~~~~~~~~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~---------~~~~~~~~ 242 (274)
T 1ja9_A 173 SKAAVEGFCRAFAVDCGAKGVTVNCIAPGGVKTDMFDENSWHYAPGGYKGMP-QEKIDEGLAN---------MNPLKRIG 242 (274)
T ss_dssp HHHHHHHHHHHHHHHHGGGTCEEEEEEECCBSSHHHHHHGGGTSTTCCTTCC-HHHHHHHHHH---------TSTTSSCB
T ss_pred HHHHHHHHHHHHHHHhhhcCeEEEEEeeCcccccchhcccccccccccccCc-hHHHHHHHHh---------cCCCCCcc
Confidence 999999998865 348999999999998764311 000000000 0111111111 12234689
Q ss_pred eHHHHHHHHHHHHHHhccCCCCCcEEEecCC
Q 010075 304 PVDMVVNAMIVAMVAHAKQPSDANIYHVGSS 334 (519)
Q Consensus 304 pVDdva~aii~a~~~~~~~~~~~~iyni~s~ 334 (519)
+++|+|++++.++..... ...+++||+++|
T Consensus 243 ~~~dva~~i~~l~~~~~~-~~~G~~~~v~gG 272 (274)
T 1ja9_A 243 YPADIGRAVSALCQEESE-WINGQVIKLTGG 272 (274)
T ss_dssp CHHHHHHHHHHHHSGGGT-TCCSCEEEESTT
T ss_pred CHHHHHHHHHHHhCcccc-cccCcEEEecCC
Confidence 999999999998864322 113689999887
|
| >3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.45A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.82 E-value=4.5e-19 Score=173.96 Aligned_cols=208 Identities=17% Similarity=0.187 Sum_probs=150.2
Q ss_pred cCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 010075 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (519)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (519)
+++|+|+||||+|+||+++++.|++.| .+|+++.|+..... ..++.+
T Consensus 26 ~~~k~vlVTGas~gIG~aia~~l~~~G---~~V~~~~r~~~~~~------------------------------~~~~~~ 72 (260)
T 3un1_A 26 NQQKVVVITGASQGIGAGLVRAYRDRN---YRVVATSRSIKPSA------------------------------DPDIHT 72 (260)
T ss_dssp TTCCEEEESSCSSHHHHHHHHHHHHTT---CEEEEEESSCCCCS------------------------------STTEEE
T ss_pred cCCCEEEEeCCCCHHHHHHHHHHHHCC---CEEEEEeCChhhcc------------------------------cCceEE
Confidence 578999999999999999999999998 68899999754321 246889
Q ss_pred EeccCCCCCCCCChhhhHHHHhc-------CccEEEEcCccCCc-------cccHHHHHHHhHHHHHHHHHHHHh---cc
Q 010075 90 VPGDISSEDLGLKDSNLKEELWN-------ELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKK---CV 152 (519)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~~-------~vdiViH~Aa~v~f-------~~~~~~~~~~Nv~gt~~ll~~a~~---~~ 152 (519)
+.+|++++ +..+.+++ ++|++||+||.... .+.++..+++|+.|+.++++.+.. ..
T Consensus 73 ~~~Dv~d~-------~~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~ 145 (260)
T 3un1_A 73 VAGDISKP-------ETADRIVREGIERFGRIDSLVNNAGVFLAKPFVEMTQEDYDHNLGVNVAGFFHITQRAAAEMLKQ 145 (260)
T ss_dssp EESCTTSH-------HHHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHT
T ss_pred EEccCCCH-------HHHHHHHHHHHHHCCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc
Confidence 99999953 33334433 79999999997532 246788899999999999988732 13
Q ss_pred CCceEEEEecceeecCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcHHH
Q 010075 153 KLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYV 232 (519)
Q Consensus 153 ~l~~~V~vSTa~v~~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~Y~ 232 (519)
+..++|++||..+..... ..+...|+
T Consensus 146 ~~g~iv~isS~~~~~~~~------------------------------------------------------~~~~~~Y~ 171 (260)
T 3un1_A 146 GSGHIVSITTSLVDQPMV------------------------------------------------------GMPSALAS 171 (260)
T ss_dssp TCEEEEEECCTTTTSCBT------------------------------------------------------TCCCHHHH
T ss_pred CCcEEEEEechhhccCCC------------------------------------------------------CCccHHHH
Confidence 568999999976543211 02346799
Q ss_pred HHHHHHHHHHHHh-----hcCCcEEEEecCccccCCCCCCCcccccccccHHHHHHhhcCCceeeccCCCceeeeeeHHH
Q 010075 233 FTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDM 307 (519)
Q Consensus 233 ~sK~~aE~lv~~~-----~~~lp~~IvRPs~V~g~~~~p~~gw~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~d~vpVDd 307 (519)
.||+..+.+.+.+ ..++++.+++||.|.++...+ . ...... .......+..++|
T Consensus 172 ~sKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~---------~---~~~~~~---------~~~p~~r~~~~~d 230 (260)
T 3un1_A 172 LTKGGLNAVTRSLAMEFSRSGVRVNAVSPGVIKTPMHPA---------E---THSTLA---------GLHPVGRMGEIRD 230 (260)
T ss_dssp HHHHHHHHHHHHHHHHTTTTTEEEEEEEECCBCCTTSCG---------G---GHHHHH---------TTSTTSSCBCHHH
T ss_pred HHHHHHHHHHHHHHHHhCcCCeEEEEEeecCCCCCCCCH---------H---HHHHHh---------ccCCCCCCcCHHH
Confidence 9999999988765 347999999999999875421 0 011111 1122345678999
Q ss_pred HHHHHHHHHHHhccCCCCCcEEEecCCC
Q 010075 308 VVNAMIVAMVAHAKQPSDANIYHVGSSL 335 (519)
Q Consensus 308 va~aii~a~~~~~~~~~~~~iyni~s~~ 335 (519)
+|++++.+.. ...-.++++++.+|.
T Consensus 231 va~av~~L~~---~~~itG~~i~vdGG~ 255 (260)
T 3un1_A 231 VVDAVLYLEH---AGFITGEILHVDGGQ 255 (260)
T ss_dssp HHHHHHHHHH---CTTCCSCEEEESTTG
T ss_pred HHHHHHHhcc---cCCCCCcEEEECCCe
Confidence 9999998832 122247899998884
|
| >2yut_A Putative short-chain oxidoreductase; alpha and beta proteins (A/B), NAD(P)-binding rossmann-fold structural genomics, NPPSFA; HET: NAP; 2.20A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=99.82 E-value=3.9e-20 Score=174.32 Aligned_cols=183 Identities=15% Similarity=0.138 Sum_probs=136.5
Q ss_pred CEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEEec
Q 010075 13 KTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVPG 92 (519)
Q Consensus 13 k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v~g 92 (519)
|+|+||||||+||++++++|++. +|+++.|+... .+++. ++. .. .++.+
T Consensus 1 k~vlVtGasg~iG~~la~~l~~~-----~V~~~~r~~~~---~~~~~-------------~~~---------~~-~~~~~ 49 (207)
T 2yut_A 1 MRVLITGATGGLGGAFARALKGH-----DLLLSGRRAGA---LAELA-------------REV---------GA-RALPA 49 (207)
T ss_dssp CEEEEETTTSHHHHHHHHHTTTS-----EEEEECSCHHH---HHHHH-------------HHH---------TC-EECCC
T ss_pred CEEEEEcCCcHHHHHHHHHHHhC-----CEEEEECCHHH---HHHHH-------------Hhc---------cC-cEEEe
Confidence 68999999999999999999985 78888886321 12221 111 11 78899
Q ss_pred cCCCCCCCCChhhhHHHHhc---CccEEEEcCccCCc-------cccHHHHHHHhHHHHHHHHHHHHhccCCceEEEEec
Q 010075 93 DISSEDLGLKDSNLKEELWN---ELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVST 162 (519)
Q Consensus 93 Dl~~~~lgls~~~~~~~l~~---~vdiViH~Aa~v~f-------~~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V~vST 162 (519)
|+++ .+..+.+++ ++|+|||+||.... .+.++..+++|+.|+.++++.+++. +.++||++||
T Consensus 50 D~~~-------~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~iv~~sS 121 (207)
T 2yut_A 50 DLAD-------ELEAKALLEEAGPLDLLVHAVGKAGRASVREAGRDLVEEMLAAHLLTAAFVLKHARFQ-KGARAVFFGA 121 (207)
T ss_dssp CTTS-------HHHHHHHHHHHCSEEEEEECCCCCCCBCSCC---CHHHHHHHHHHHHHHHHHHHCCEE-EEEEEEEECC
T ss_pred eCCC-------HHHHHHHHHhcCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHhc-CCcEEEEEcC
Confidence 9995 333345555 89999999997643 2467888999999999999999653 6789999999
Q ss_pred ceeecCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcHHHHHHHHHHHHH
Q 010075 163 AYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLM 242 (519)
Q Consensus 163 a~v~~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~Y~~sK~~aE~lv 242 (519)
..++... .+...|+.||+..|.++
T Consensus 122 ~~~~~~~--------------------------------------------------------~~~~~Y~~sK~a~~~~~ 145 (207)
T 2yut_A 122 YPRYVQV--------------------------------------------------------PGFAAYAAAKGALEAYL 145 (207)
T ss_dssp CHHHHSS--------------------------------------------------------TTBHHHHHHHHHHHHHH
T ss_pred hhhccCC--------------------------------------------------------CCcchHHHHHHHHHHHH
Confidence 8765321 23467999999999998
Q ss_pred HHh-----hcCCcEEEEecCccccCCCCCCCcccccccccHHHHHHhhcCCceeeccCCCceeeeeeHHHHHHHHHHHHH
Q 010075 243 QQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMIVAMV 317 (519)
Q Consensus 243 ~~~-----~~~lp~~IvRPs~V~g~~~~p~~gw~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~d~vpVDdva~aii~a~~ 317 (519)
+.+ ..+++++++||+.++++... +.+....++++++|+|++++.++.
T Consensus 146 ~~~~~~~~~~gi~v~~v~pg~v~t~~~~----------------------------~~~~~~~~~~~~~dva~~~~~~~~ 197 (207)
T 2yut_A 146 EAARKELLREGVHLVLVRLPAVATGLWA----------------------------PLGGPPKGALSPEEAARKVLEGLF 197 (207)
T ss_dssp HHHHHHHHTTTCEEEEECCCCBCSGGGG----------------------------GGTSCCTTCBCHHHHHHHHHHHHC
T ss_pred HHHHHHHhhhCCEEEEEecCcccCCCcc----------------------------ccCCCCCCCCCHHHHHHHHHHHHh
Confidence 865 25899999999999875310 011223678999999999999886
Q ss_pred H
Q 010075 318 A 318 (519)
Q Consensus 318 ~ 318 (519)
.
T Consensus 198 ~ 198 (207)
T 2yut_A 198 R 198 (207)
T ss_dssp -
T ss_pred C
Confidence 4
|
| >3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A* | Back alignment and structure |
|---|
Probab=99.82 E-value=7.5e-19 Score=171.17 Aligned_cols=222 Identities=14% Similarity=0.151 Sum_probs=152.9
Q ss_pred cCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEec-CCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceE
Q 010075 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRA-ADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKIT 88 (519)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~-~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~ 88 (519)
+++|+|+|||||||||++++++|++.| .+|+++.|+ .... +.+.+++ +.. ..++.
T Consensus 5 l~~k~vlVTGasggiG~~~a~~l~~~G---~~V~~~~r~~~~~~---~~~~~~~---------~~~---------~~~~~ 60 (258)
T 3afn_B 5 LKGKRVLITGSSQGIGLATARLFARAG---AKVGLHGRKAPANI---DETIASM---------RAD---------GGDAA 60 (258)
T ss_dssp GTTCEEEETTCSSHHHHHHHHHHHHTT---CEEEEEESSCCTTH---HHHHHHH---------HHT---------TCEEE
T ss_pred CCCCEEEEeCCCChHHHHHHHHHHHCC---CEEEEECCCchhhH---HHHHHHH---------Hhc---------CCceE
Confidence 678999999999999999999999998 678999997 3321 2221111 110 25788
Q ss_pred EEeccCCCCCCCCChhhhHHHHhc-------CccEEEEcCcc-CC---c----cccHHHHHHHhHHHHHHHHHHHHhc--
Q 010075 89 FVPGDISSEDLGLKDSNLKEELWN-------ELDIMVNSAAI-TK---F----DERYDVAFGINTLGVIHLVNFAKKC-- 151 (519)
Q Consensus 89 ~v~gDl~~~~lgls~~~~~~~l~~-------~vdiViH~Aa~-v~---f----~~~~~~~~~~Nv~gt~~ll~~a~~~-- 151 (519)
++.+|+++ .+..+.+++ ++|+|||+||. .. + .+.++..+++|+.|+.++++.+.+.
T Consensus 61 ~~~~D~~~-------~~~~~~~~~~~~~~~g~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~ 133 (258)
T 3afn_B 61 FFAADLAT-------SEACQQLVDEFVAKFGGIDVLINNAGGLVGRKPLPEIDDTFYDAVMDANIRSVVMTTKFALPHLA 133 (258)
T ss_dssp EEECCTTS-------HHHHHHHHHHHHHHHSSCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHH
T ss_pred EEECCCCC-------HHHHHHHHHHHHHHcCCCCEEEECCCCcCCcCccccCCHHHHHHHHHhccHHHHHHHHHHHHHHH
Confidence 99999995 333334444 79999999996 32 1 1346778999999999998876431
Q ss_pred -cC--C---ceEEEEecceeecCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccC
Q 010075 152 -VK--L---KVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLH 225 (519)
Q Consensus 152 -~~--l---~~~V~vSTa~v~~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~ 225 (519)
.+ . .++|++||.+.+....
T Consensus 134 ~~~~~~~~~~~iv~~sS~~~~~~~~------------------------------------------------------- 158 (258)
T 3afn_B 134 AAAKASGQTSAVISTGSIAGHTGGG------------------------------------------------------- 158 (258)
T ss_dssp HHHHHHTSCEEEEEECCTHHHHCCC-------------------------------------------------------
T ss_pred hcccCCCCCcEEEEecchhhccCCC-------------------------------------------------------
Confidence 11 2 7899999986543100
Q ss_pred CCCcHHHHHHHHHHHHHHHh-----hcCCcEEEEecCccccCCCCCCCcccccccccHHHHHHhhcCCceeeccCCCcee
Q 010075 226 GWPNTYVFTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIM 300 (519)
Q Consensus 226 ~~~n~Y~~sK~~aE~lv~~~-----~~~lp~~IvRPs~V~g~~~~p~~gw~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~ 300 (519)
.+...|+.||+..|.+++.+ ..+++++++||+.|.++..... ...+...+..+ ....
T Consensus 159 ~~~~~Y~~sK~a~~~~~~~~~~e~~~~gi~v~~v~Pg~v~t~~~~~~---------~~~~~~~~~~~---------~~~~ 220 (258)
T 3afn_B 159 PGAGLYGAAKAFLHNVHKNWVDFHTKDGVRFNIVSPGTVDTAFHADK---------TQDVRDRISNG---------IPMG 220 (258)
T ss_dssp TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSGGGTTC---------CHHHHHHHHTT---------CTTC
T ss_pred CCchHHHHHHHHHHHHHHHHHHhhcccCeEEEEEeCCCccccccccc---------CHHHHHHHhcc---------CCCC
Confidence 22457999999999998765 3489999999999988754321 11222222222 1224
Q ss_pred eeeeHHHHHHHHHHHHHHhccCCCCCcEEEecCCC
Q 010075 301 DVIPVDMVVNAMIVAMVAHAKQPSDANIYHVGSSL 335 (519)
Q Consensus 301 d~vpVDdva~aii~a~~~~~~~~~~~~iyni~s~~ 335 (519)
++++++|+|++++.++.......-.+++|++++|.
T Consensus 221 ~~~~~~dva~~~~~l~~~~~~~~~~G~~~~v~gg~ 255 (258)
T 3afn_B 221 RFGTAEEMAPAFLFFASHLASGYITGQVLDINGGQ 255 (258)
T ss_dssp SCBCGGGTHHHHHHHHCHHHHTTCCSEEEEESTTS
T ss_pred cCCCHHHHHHHHHHHhCcchhccccCCEEeECCCc
Confidence 68999999999999886432201136899998874
|
| >3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri} | Back alignment and structure |
|---|
Probab=99.82 E-value=1.9e-19 Score=181.44 Aligned_cols=222 Identities=13% Similarity=0.158 Sum_probs=149.5
Q ss_pred CCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecC-CcccH--HHHHHHHHhhhhhHHHHHhhhccccccccCCceE
Q 010075 12 NKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAA-DIDSA--ALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKIT 88 (519)
Q Consensus 12 ~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~-~~~~~--~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~ 88 (519)
.|+|+|||||||+|+++++.|++.| .+|++++|+. ..... .+.+. + +. ..+++
T Consensus 4 ~~~ilVtGatG~iG~~l~~~L~~~g---~~V~~~~R~~~~~~~~~~~~~l~-~---------~~-----------~~~v~ 59 (321)
T 3c1o_A 4 MEKIIIYGGTGYIGKFMVRASLSFS---HPTFIYARPLTPDSTPSSVQLRE-E---------FR-----------SMGVT 59 (321)
T ss_dssp CCCEEEETTTSTTHHHHHHHHHHTT---CCEEEEECCCCTTCCHHHHHHHH-H---------HH-----------HTTCE
T ss_pred ccEEEEEcCCchhHHHHHHHHHhCC---CcEEEEECCcccccChHHHHHHH-H---------hh-----------cCCcE
Confidence 5789999999999999999999988 5789999986 32111 11111 0 00 25689
Q ss_pred EEeccCCCCCCCCChhhhHHHHhcCccEEEEcCccCCccccHHHHHHHhHHHHHHHHHHHHhccCCceEEEEecceeecC
Q 010075 89 FVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKFDERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAYVAGE 168 (519)
Q Consensus 89 ~v~gDl~~~~lgls~~~~~~~l~~~vdiViH~Aa~v~f~~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V~vSTa~v~~~ 168 (519)
++.+|+++ .+.+..+++++|+|||+|+... +.++.+++++|++.+++++||+ | . +|.
T Consensus 60 ~v~~D~~d-------~~~l~~a~~~~d~vi~~a~~~~------------~~~~~~l~~aa~~~g~v~~~v~-S-~--~g~ 116 (321)
T 3c1o_A 60 IIEGEMEE-------HEKMVSVLKQVDIVISALPFPM------------ISSQIHIINAIKAAGNIKRFLP-S-D--FGC 116 (321)
T ss_dssp EEECCTTC-------HHHHHHHHTTCSEEEECCCGGG------------SGGGHHHHHHHHHHCCCCEEEC-S-C--CSS
T ss_pred EEEecCCC-------HHHHHHHHcCCCEEEECCCccc------------hhhHHHHHHHHHHhCCccEEec-c-c--ccc
Confidence 99999994 3445578889999999998642 5678899999998733899983 3 2 332
Q ss_pred cCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcHHHHHHHHHHHHHHHhhcC
Q 010075 169 RTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLMQQSKEN 248 (519)
Q Consensus 169 ~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~Y~~sK~~aE~lv~~~~~~ 248 (519)
.. +|. .+.. +..+.| .+|..+|+++++ .+
T Consensus 117 ~~---~~~-----~~~~----------------------------------------p~~~~y-~sK~~~e~~~~~--~~ 145 (321)
T 3c1o_A 117 EE---DRI-----KPLP----------------------------------------PFESVL-EKKRIIRRAIEA--AA 145 (321)
T ss_dssp CG---GGC-----CCCH----------------------------------------HHHHHH-HHHHHHHHHHHH--HT
T ss_pred Cc---ccc-----ccCC----------------------------------------CcchHH-HHHHHHHHHHHH--cC
Confidence 11 111 0100 012469 999999999986 57
Q ss_pred CcEEEEecCccccCCCCCCCcccccccccHHHHH---HhhcCCceeeccCCCceeeeeeHHHHHHHHHHHHHHhccCCCC
Q 010075 249 LSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFV---ASAQGNLRCLVGETKVIMDVIPVDMVVNAMIVAMVAHAKQPSD 325 (519)
Q Consensus 249 lp~~IvRPs~V~g~~~~p~~gw~~~~~~~~~~i~---~~~~g~~~~~~~~~~~~~d~vpVDdva~aii~a~~~~~~~~~~ 325 (519)
++++++||+.+++.... .+.. ....+....++++++...++++++|+|+++..++..... .
T Consensus 146 ~~~~~lrp~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~l~~~~~---~ 209 (321)
T 3c1o_A 146 LPYTYVSANCFGAYFVN-------------YLLHPSPHPNRNDDIVIYGTGETKFVLNYEEDIAKYTIKVACDPRC---C 209 (321)
T ss_dssp CCBEEEECCEEHHHHHH-------------HHHCCCSSCCTTSCEEEETTSCCEEEEECHHHHHHHHHHHHHCGGG---T
T ss_pred CCeEEEEeceecccccc-------------ccccccccccccCceEEecCCCcceeEeeHHHHHHHHHHHHhCccc---c
Confidence 99999999998875220 0110 011223344567888999999999999999999875332 2
Q ss_pred CcEEEecC-CCCCchhHHHHHHH
Q 010075 326 ANIYHVGS-SLRNPVTLGLQVAN 347 (519)
Q Consensus 326 ~~iyni~s-~~~~~i~~~~~~~~ 347 (519)
+++|++++ +...++..+...+.
T Consensus 210 g~~~~~~g~~~~~t~~e~~~~~~ 232 (321)
T 3c1o_A 210 NRIVIYRPPKNIISQNELISLWE 232 (321)
T ss_dssp TEEEECCCGGGEEEHHHHHHHHH
T ss_pred CeEEEEeCCCCcccHHHHHHHHH
Confidence 56788765 34444333444443
|
| >1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A | Back alignment and structure |
|---|
Probab=99.82 E-value=8.2e-19 Score=172.15 Aligned_cols=221 Identities=17% Similarity=0.140 Sum_probs=139.6
Q ss_pred cCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 010075 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (519)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (519)
+++|+|+||||||+||++++++|++.| .+|+++.|+... .+.+.+ .+++. ..++.+
T Consensus 12 l~~k~vlITGasggiG~~la~~l~~~G---~~V~~~~r~~~~---~~~~~~---------~~~~~---------~~~~~~ 67 (266)
T 1xq1_A 12 LKAKTVLVTGGTKGIGHAIVEEFAGFG---AVIHTCARNEYE---LNECLS---------KWQKK---------GFQVTG 67 (266)
T ss_dssp CTTCEEEETTTTSHHHHHHHHHHHHTT---CEEEEEESCHHH---HHHHHH---------HHHHT---------TCCEEE
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCC---CEEEEEeCCHHH---HHHHHH---------HHHhc---------CCeeEE
Confidence 578999999999999999999999998 678898886421 111111 11111 246889
Q ss_pred EeccCCCCCCCCChhhhHHHHh--------cCccEEEEcCccCCc-------cccHHHHHHHhHHHHHHHHHHHHhc---
Q 010075 90 VPGDISSEDLGLKDSNLKEELW--------NELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKC--- 151 (519)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~--------~~vdiViH~Aa~v~f-------~~~~~~~~~~Nv~gt~~ll~~a~~~--- 151 (519)
+.+|+++ .+..+.++ .++|+|||+||.... .+.++..+++|+.|+.++++.+...
T Consensus 68 ~~~D~~~-------~~~~~~~~~~~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~ 140 (266)
T 1xq1_A 68 SVCDASL-------RPEREKLMQTVSSMFGGKLDILINNLGAIRSKPTLDYTAEDFSFHISTNLESAYHLSQLAHPLLKA 140 (266)
T ss_dssp EECCTTS-------HHHHHHHHHHHHHHHTTCCSEEEEECCC------CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EECCCCC-------HHHHHHHHHHHHHHhCCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHh
Confidence 9999995 32223333 579999999997532 2467788999999999999988421
Q ss_pred cCCceEEEEecceeecCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcHH
Q 010075 152 VKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTY 231 (519)
Q Consensus 152 ~~l~~~V~vSTa~v~~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~Y 231 (519)
.+.+++|++||...+... .....|
T Consensus 141 ~~~~~iv~isS~~~~~~~--------------------------------------------------------~~~~~Y 164 (266)
T 1xq1_A 141 SGCGNIIFMSSIAGVVSA--------------------------------------------------------SVGSIY 164 (266)
T ss_dssp HSSCEEEEEC------------------------------------------------------------------CCHH
T ss_pred cCCcEEEEEccchhccCC--------------------------------------------------------CCCchH
Confidence 267899999998665321 124679
Q ss_pred HHHHHHHHHHHHHh-----hcCCcEEEEecCccccCCCCCCCcccccccccHHHHHHhhcCCceeeccCCCceeeeeeHH
Q 010075 232 VFTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVD 306 (519)
Q Consensus 232 ~~sK~~aE~lv~~~-----~~~lp~~IvRPs~V~g~~~~p~~gw~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~d~vpVD 306 (519)
+.||+..|.+++.+ ..+++++++|||.|+++...... . ..+...... ......+++++
T Consensus 165 ~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~---~-----~~~~~~~~~---------~~~~~~~~~~~ 227 (266)
T 1xq1_A 165 SATKGALNQLARNLACEWASDGIRANAVAPAVIATPLAEAVY---D-----DEFKKVVIS---------RKPLGRFGEPE 227 (266)
T ss_dssp HHHHHHHHHHHHHHHHHHGGGTCEEEEEECCSCC------------------------------------------CCGG
T ss_pred HHHHHHHHHHHHHHHHHHhHhCcEEEEEeeCCCccchhhhhc---C-----HHHHHHHHh---------cCCCCCCcCHH
Confidence 99999999998765 34899999999999987543210 0 000000000 01123478899
Q ss_pred HHHHHHHHHHHHhccCCCCCcEEEecCCC
Q 010075 307 MVVNAMIVAMVAHAKQPSDANIYHVGSSL 335 (519)
Q Consensus 307 dva~aii~a~~~~~~~~~~~~iyni~s~~ 335 (519)
|+|++++.++..... ...++++++.+|.
T Consensus 228 dva~~~~~l~~~~~~-~~~G~~~~v~gG~ 255 (266)
T 1xq1_A 228 EVSSLVAFLCMPAAS-YITGQTICVDGGL 255 (266)
T ss_dssp GGHHHHHHHTSGGGT-TCCSCEEECCCCE
T ss_pred HHHHHHHHHcCcccc-CccCcEEEEcCCc
Confidence 999999988753322 2236899998873
|
| >2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A* | Back alignment and structure |
|---|
Probab=99.82 E-value=2e-19 Score=181.16 Aligned_cols=218 Identities=15% Similarity=0.157 Sum_probs=147.6
Q ss_pred CEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCccc-HHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEEe
Q 010075 13 KTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDS-AALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVP 91 (519)
Q Consensus 13 k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~-~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v~ 91 (519)
++|+|||||||+|+++++.|++.| .+|++++|+..... ..+.+. ..+++++.
T Consensus 12 ~~ilVtGatG~iG~~l~~~L~~~g---~~V~~l~R~~~~~~~~~~~l~------------------------~~~v~~v~ 64 (318)
T 2r6j_A 12 SKILIFGGTGYIGNHMVKGSLKLG---HPTYVFTRPNSSKTTLLDEFQ------------------------SLGAIIVK 64 (318)
T ss_dssp CCEEEETTTSTTHHHHHHHHHHTT---CCEEEEECTTCSCHHHHHHHH------------------------HTTCEEEE
T ss_pred CeEEEECCCchHHHHHHHHHHHCC---CcEEEEECCCCchhhHHHHhh------------------------cCCCEEEE
Confidence 589999999999999999999988 57899999875221 111111 15688999
Q ss_pred ccCCCCCCCCChhhhHHHHhcCccEEEEcCccCCccccHHHHHHHhHHHHHHHHHHHHhccCCceEEEEecceeecCcCC
Q 010075 92 GDISSEDLGLKDSNLKEELWNELDIMVNSAAITKFDERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAYVAGERTG 171 (519)
Q Consensus 92 gDl~~~~lgls~~~~~~~l~~~vdiViH~Aa~v~f~~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V~vSTa~v~~~~~~ 171 (519)
+|+++ .+.+..+++++|+|||+|+... +.++.+++++|++.+++++||+ |+ +|...
T Consensus 65 ~Dl~d-------~~~l~~a~~~~d~vi~~a~~~~------------~~~~~~l~~aa~~~g~v~~~v~-S~---~g~~~- 120 (318)
T 2r6j_A 65 GELDE-------HEKLVELMKKVDVVISALAFPQ------------ILDQFKILEAIKVAGNIKRFLP-SD---FGVEE- 120 (318)
T ss_dssp CCTTC-------HHHHHHHHTTCSEEEECCCGGG------------STTHHHHHHHHHHHCCCCEEEC-SC---CSSCT-
T ss_pred ecCCC-------HHHHHHHHcCCCEEEECCchhh------------hHHHHHHHHHHHhcCCCCEEEe-ec---cccCc-
Confidence 99994 3444578889999999998642 5678899999998733899985 32 33211
Q ss_pred eeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcHHHHHHHHHHHHHHHhhcCCcE
Q 010075 172 LILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLMQQSKENLSL 251 (519)
Q Consensus 172 ~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~Y~~sK~~aE~lv~~~~~~lp~ 251 (519)
+|. .+.. +..+.| .+|..+|+++++ .++++
T Consensus 121 --~~~-----~~~~----------------------------------------p~~~~y-~sK~~~e~~~~~--~~~~~ 150 (318)
T 2r6j_A 121 --DRI-----NALP----------------------------------------PFEALI-ERKRMIRRAIEE--ANIPY 150 (318)
T ss_dssp --TTC-----CCCH----------------------------------------HHHHHH-HHHHHHHHHHHH--TTCCB
T ss_pred --ccc-----cCCC----------------------------------------CcchhH-HHHHHHHHHHHh--cCCCe
Confidence 110 1100 002468 999999999986 58999
Q ss_pred EEEecCccccCCCCCCCcccccccccHHHHHHhhcCCceeeccCCCceeeeeeHHHHHHHHHHHHHHhccCCCCCcEEEe
Q 010075 252 VIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMIVAMVAHAKQPSDANIYHV 331 (519)
Q Consensus 252 ~IvRPs~V~g~~~~p~~gw~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~d~vpVDdva~aii~a~~~~~~~~~~~~iyni 331 (519)
+++||+.+++... ..++.....+....++++++...++++++|+|++++.++..... .+++|++
T Consensus 151 ~~lr~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~l~~~~~---~~~~~~~ 214 (318)
T 2r6j_A 151 TYVSANCFASYFI-------------NYLLRPYDPKDEITVYGTGEAKFAMNYEQDIGLYTIKVATDPRA---LNRVVIY 214 (318)
T ss_dssp EEEECCEEHHHHH-------------HHHHCTTCCCSEEEEETTSCCEEEEECHHHHHHHHHHHTTCGGG---TTEEEEC
T ss_pred EEEEcceehhhhh-------------hhhccccCCCCceEEecCCCceeeEeeHHHHHHHHHHHhcCccc---cCeEEEe
Confidence 9999998876321 11111112233345667888999999999999999998864322 2467777
Q ss_pred cC-CCCCchhHHHHHHH
Q 010075 332 GS-SLRNPVTLGLQVAN 347 (519)
Q Consensus 332 ~s-~~~~~i~~~~~~~~ 347 (519)
++ +...+...+...+.
T Consensus 215 ~g~~~~~s~~e~~~~~~ 231 (318)
T 2r6j_A 215 RPSTNIITQLELISRWE 231 (318)
T ss_dssp CCGGGEEEHHHHHHHHH
T ss_pred cCCCCccCHHHHHHHHH
Confidence 54 44444333444443
|
| >1uay_A Type II 3-hydroxyacyl-COA dehydrogenase; beta oxidation, fatty acid, structural genomi structural genomics/proteomics initiative, RSGI; HET: ADN; 1.40A {Thermus thermophilus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.82 E-value=7e-19 Score=169.74 Aligned_cols=207 Identities=12% Similarity=0.131 Sum_probs=149.4
Q ss_pred CCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEEe
Q 010075 12 NKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVP 91 (519)
Q Consensus 12 ~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v~ 91 (519)
+|+|+||||||+||++++++|++.| .+|+++.|+.. . +++.++.
T Consensus 2 ~k~vlVtGasggiG~~la~~l~~~G---~~V~~~~r~~~-~--------------------------------~~~~~~~ 45 (242)
T 1uay_A 2 ERSALVTGGASGLGRAAALALKARG---YRVVVLDLRRE-G--------------------------------EDLIYVE 45 (242)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHHT---CEEEEEESSCC-S--------------------------------SSSEEEE
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCC---CEEEEEccCcc-c--------------------------------cceEEEe
Confidence 6899999999999999999999998 67899998753 1 3457899
Q ss_pred ccCCCCCCCCChhhhHHHHhc------CccEEEEcCccCCcc-------c----cHHHHHHHhHHHHHHHHHHHHhc-cC
Q 010075 92 GDISSEDLGLKDSNLKEELWN------ELDIMVNSAAITKFD-------E----RYDVAFGINTLGVIHLVNFAKKC-VK 153 (519)
Q Consensus 92 gDl~~~~lgls~~~~~~~l~~------~vdiViH~Aa~v~f~-------~----~~~~~~~~Nv~gt~~ll~~a~~~-~~ 153 (519)
+|+++ .+..+.+++ ++|+|||+||..... + .++..+++|+.|+.++++++.+. ..
T Consensus 46 ~D~~~-------~~~~~~~~~~~~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~ 118 (242)
T 1uay_A 46 GDVTR-------EEDVRRAVARAQEEAPLFAVVSAAGVGLAEKILGKEGPHGLESFRRVLEVNLLGTFNVLRLAAWAMRE 118 (242)
T ss_dssp CCTTC-------HHHHHHHHHHHHHHSCEEEEEECCCCCCCCCSBCSSSBCCHHHHHHHHHHHTHHHHHHHHHHHHHHTT
T ss_pred CCCCC-------HHHHHHHHHHHHhhCCceEEEEcccccCcccccccccccchHHHHHHHHHHhHHHHHHHHHHHHHHHh
Confidence 99995 333334444 799999999975431 1 67888999999999999988653 11
Q ss_pred --------CceEEEEecceeecCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccC
Q 010075 154 --------LKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLH 225 (519)
Q Consensus 154 --------l~~~V~vSTa~v~~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~ 225 (519)
..+||++||...+...
T Consensus 119 ~~~~~~~~~~~iv~~sS~~~~~~~-------------------------------------------------------- 142 (242)
T 1uay_A 119 NPPDAEGQRGVIVNTASVAAFEGQ-------------------------------------------------------- 142 (242)
T ss_dssp CCCCTTSCSEEEEEECCTHHHHCC--------------------------------------------------------
T ss_pred cCCCCCCCCeEEEEeCChhhccCC--------------------------------------------------------
Confidence 2389999998765421
Q ss_pred CCCcHHHHHHHHHHHHHHHh-----hcCCcEEEEecCccccCCCCCCCcccccccccHHHHHHhhcCCceeeccCCCcee
Q 010075 226 GWPNTYVFTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIM 300 (519)
Q Consensus 226 ~~~n~Y~~sK~~aE~lv~~~-----~~~lp~~IvRPs~V~g~~~~p~~gw~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~ 300 (519)
.....|+.||+..|.+++.. ..+++++++|||.|+++.....+ ..+......+.. + ..
T Consensus 143 ~~~~~Y~~sK~a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~---------~~~~~~~~~~~~--~------~~ 205 (242)
T 1uay_A 143 IGQAAYAASKGGVVALTLPAARELAGWGIRVVTVAPGLFDTPLLQGLP---------EKAKASLAAQVP--F------PP 205 (242)
T ss_dssp TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSCSSHHHHTSC---------HHHHHHHHTTCC--S------SC
T ss_pred CCCchhhHHHHHHHHHHHHHHHHHhhcCcEEEEEEeccCcchhhhccc---------hhHHHHHHhhCC--C------cc
Confidence 22467999999999887754 34899999999999886532211 111222222111 0 02
Q ss_pred eeeeHHHHHHHHHHHHHHhccCCCCCcEEEecCCCCC
Q 010075 301 DVIPVDMVVNAMIVAMVAHAKQPSDANIYHVGSSLRN 337 (519)
Q Consensus 301 d~vpVDdva~aii~a~~~~~~~~~~~~iyni~s~~~~ 337 (519)
.+++++|+|++++.++.. ....+++|++.+|...
T Consensus 206 ~~~~~~dva~~~~~l~~~---~~~~G~~~~v~gG~~~ 239 (242)
T 1uay_A 206 RLGRPEEYAALVLHILEN---PMLNGEVVRLDGALRM 239 (242)
T ss_dssp SCCCHHHHHHHHHHHHHC---TTCCSCEEEESTTCCC
T ss_pred cCCCHHHHHHHHHHHhcC---CCCCCcEEEEcCCeec
Confidence 468899999999998874 1123689999888543
|
| >2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum} | Back alignment and structure |
|---|
Probab=99.82 E-value=4.6e-19 Score=171.78 Aligned_cols=219 Identities=15% Similarity=0.152 Sum_probs=141.5
Q ss_pred cCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEE-EecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceE
Q 010075 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLF-VRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKIT 88 (519)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~L-vR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~ 88 (519)
+++|+|+||||||+||++++++|++.| .+|+++ .|+... .+.+.++ +++ ...++.
T Consensus 3 l~~~~vlItGasggiG~~~a~~l~~~G---~~V~~~~~r~~~~---~~~~~~~---------~~~---------~~~~~~ 58 (247)
T 2hq1_A 3 LKGKTAIVTGSSRGLGKAIAWKLGNMG---ANIVLNGSPASTS---LDATAEE---------FKA---------AGINVV 58 (247)
T ss_dssp TTTCEEEESSCSSHHHHHHHHHHHHTT---CEEEEEECTTCSH---HHHHHHH---------HHH---------TTCCEE
T ss_pred CCCcEEEEECCCchHHHHHHHHHHHCC---CEEEEEcCcCHHH---HHHHHHH---------HHh---------cCCcEE
Confidence 468999999999999999999999998 578888 444322 2222111 111 025688
Q ss_pred EEeccCCCCCCCCChhhhHHHHhc-------CccEEEEcCccCCc-------cccHHHHHHHhHHHHHHHHHHHHhc---
Q 010075 89 FVPGDISSEDLGLKDSNLKEELWN-------ELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKC--- 151 (519)
Q Consensus 89 ~v~gDl~~~~lgls~~~~~~~l~~-------~vdiViH~Aa~v~f-------~~~~~~~~~~Nv~gt~~ll~~a~~~--- 151 (519)
++.+|+++ .+..+.+++ ++|+|||+||.... .+.++..+++|+.|+.++++.+.+.
T Consensus 59 ~~~~D~~~-------~~~~~~~~~~~~~~~~~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~ 131 (247)
T 2hq1_A 59 VAKGDVKN-------PEDVENMVKTAMDAFGRIDILVNNAGITRDTLMLKMSEKDWDDVLNTNLKSAYLCTKAVSKIMLK 131 (247)
T ss_dssp EEESCTTS-------HHHHHHHHHHHHHHHSCCCEEEECC---------------CHHHHHHTHHHHHHHHHHHHHHHHH
T ss_pred EEECCCCC-------HHHHHHHHHHHHHhcCCCCEEEECCCCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHh
Confidence 99999995 332334333 79999999997542 2456788999999999888877542
Q ss_pred cCCceEEEEeccee-ecCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcH
Q 010075 152 VKLKVFVHVSTAYV-AGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNT 230 (519)
Q Consensus 152 ~~l~~~V~vSTa~v-~~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~ 230 (519)
.+..+||++||... ++. .....
T Consensus 132 ~~~~~iv~~sS~~~~~~~---------------------------------------------------------~~~~~ 154 (247)
T 2hq1_A 132 QKSGKIINITSIAGIIGN---------------------------------------------------------AGQAN 154 (247)
T ss_dssp HTCEEEEEECC------------------------------------------------------------------CHH
T ss_pred cCCcEEEEEcChhhccCC---------------------------------------------------------CCCcH
Confidence 25689999999743 221 12357
Q ss_pred HHHHHHHHHHHHHHh-----hcCCcEEEEecCccccCCCCCCCcccccccccHHHHHHhhcCCceeeccCCCceeeeeeH
Q 010075 231 YVFTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPV 305 (519)
Q Consensus 231 Y~~sK~~aE~lv~~~-----~~~lp~~IvRPs~V~g~~~~p~~gw~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~d~vpV 305 (519)
|+.||+..|.+++.+ ..++++.+++||.+.++..... ..........+ .....++++
T Consensus 155 Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~---------~~~~~~~~~~~---------~~~~~~~~~ 216 (247)
T 2hq1_A 155 YAASKAGLIGFTKSIAKEFAAKGIYCNAVAPGIIKTDMTDVL---------PDKVKEMYLNN---------IPLKRFGTP 216 (247)
T ss_dssp HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTS---------CHHHHHHHHTT---------STTSSCBCH
T ss_pred hHHHHHHHHHHHHHHHHHHHHcCcEEEEEEEEEEeccchhhc---------chHHHHHHHhh---------CCCCCCCCH
Confidence 999999999988765 3479999999999876532111 11111112111 122357899
Q ss_pred HHHHHHHHHHHHHhccCCCCCcEEEecCCC
Q 010075 306 DMVVNAMIVAMVAHAKQPSDANIYHVGSSL 335 (519)
Q Consensus 306 Ddva~aii~a~~~~~~~~~~~~iyni~s~~ 335 (519)
+|+|++++.++..... ...+++||+++|.
T Consensus 217 ~dva~~~~~l~~~~~~-~~~G~~~~v~gG~ 245 (247)
T 2hq1_A 217 EEVANVVGFLASDDSN-YITGQVINIDGGL 245 (247)
T ss_dssp HHHHHHHHHHHSGGGT-TCCSCEEEESTTC
T ss_pred HHHHHHHHHHcCcccc-cccCcEEEeCCCc
Confidence 9999999988764322 1236899998873
|
| >1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.81 E-value=1.7e-19 Score=180.41 Aligned_cols=225 Identities=12% Similarity=0.165 Sum_probs=149.4
Q ss_pred CCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcc-cH--HHHHHHHHhhhhhHHHHHhhhccccccccCCceE
Q 010075 12 NKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADID-SA--ALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKIT 88 (519)
Q Consensus 12 ~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~-~~--~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~ 88 (519)
.|+|+|||||||+|+++++.|++.| ++|++++|+.... .. .+.+. . + ...+++
T Consensus 4 ~~~ilVtGatG~iG~~l~~~L~~~g---~~V~~l~R~~~~~~~~~~~~~~~-~---------l-----------~~~~v~ 59 (308)
T 1qyc_A 4 RSRILLIGATGYIGRHVAKASLDLG---HPTFLLVRESTASSNSEKAQLLE-S---------F-----------KASGAN 59 (308)
T ss_dssp CCCEEEESTTSTTHHHHHHHHHHTT---CCEEEECCCCCTTTTHHHHHHHH-H---------H-----------HTTTCE
T ss_pred CCEEEEEcCCcHHHHHHHHHHHhCC---CCEEEEECCcccccCHHHHHHHH-H---------H-----------HhCCCE
Confidence 5789999999999999999999988 5789999986532 11 11111 0 0 025789
Q ss_pred EEeccCCCCCCCCChhhhHHHHhcCccEEEEcCccCCccccHHHHHHHhHHHHHHHHHHHHhccCCceEEEEecceeecC
Q 010075 89 FVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKFDERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAYVAGE 168 (519)
Q Consensus 89 ~v~gDl~~~~lgls~~~~~~~l~~~vdiViH~Aa~v~f~~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V~vSTa~v~~~ 168 (519)
++.+|+++ .+.+..+++++|+|||+|+... +.++.+++++|++.+++++||+ |+ +|.
T Consensus 60 ~v~~D~~d-------~~~l~~~~~~~d~vi~~a~~~~------------~~~~~~l~~aa~~~g~v~~~v~-S~---~g~ 116 (308)
T 1qyc_A 60 IVHGSIDD-------HASLVEAVKNVDVVISTVGSLQ------------IESQVNIIKAIKEVGTVKRFFP-SE---FGN 116 (308)
T ss_dssp EECCCTTC-------HHHHHHHHHTCSEEEECCCGGG------------SGGGHHHHHHHHHHCCCSEEEC-SC---CSS
T ss_pred EEEeccCC-------HHHHHHHHcCCCEEEECCcchh------------hhhHHHHHHHHHhcCCCceEee-cc---ccc
Confidence 99999995 3444577789999999998642 5577899999998733899984 43 332
Q ss_pred cCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcHHHHHHHHHHHHHHHhhcC
Q 010075 169 RTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLMQQSKEN 248 (519)
Q Consensus 169 ~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~Y~~sK~~aE~lv~~~~~~ 248 (519)
.. +|. .+.. +..+.| .+|..+|+++++ .+
T Consensus 117 ~~---~~~-----~~~~----------------------------------------p~~~~y-~sK~~~e~~~~~--~~ 145 (308)
T 1qyc_A 117 DV---DNV-----HAVE----------------------------------------PAKSVF-EVKAKVRRAIEA--EG 145 (308)
T ss_dssp CT---TSC-----CCCT----------------------------------------THHHHH-HHHHHHHHHHHH--HT
T ss_pred Cc---ccc-----ccCC----------------------------------------cchhHH-HHHHHHHHHHHh--cC
Confidence 11 110 1100 112468 999999999986 57
Q ss_pred CcEEEEecCccccCCCCCCCcccccccccHHHHHHhhcCCceeeccCCCceeeeeeHHHHHHHHHHHHHHhccCCCCCcE
Q 010075 249 LSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMIVAMVAHAKQPSDANI 328 (519)
Q Consensus 249 lp~~IvRPs~V~g~~~~p~~gw~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~d~vpVDdva~aii~a~~~~~~~~~~~~i 328 (519)
++++++||+.+++.....+..+. .....+....++++++...++++++|+|++++.++..... .+++
T Consensus 146 ~~~~~~r~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~l~~~~~---~~~~ 212 (308)
T 1qyc_A 146 IPYTYVSSNCFAGYFLRSLAQAG----------LTAPPRDKVVILGDGNARVVFVKEEDIGTFTIKAVDDPRT---LNKT 212 (308)
T ss_dssp CCBEEEECCEEHHHHTTTTTCTT----------CSSCCSSEEEEETTSCCEEEEECHHHHHHHHHTTSSCGGG---TTEE
T ss_pred CCeEEEEeceecccccccccccc----------ccCCCCCceEEecCCCceEEEecHHHHHHHHHHHHhCccc---cCeE
Confidence 99999999999885432111100 0011222345667888999999999999999988764321 2467
Q ss_pred EEecC-CCCCchhHHHHHHH
Q 010075 329 YHVGS-SLRNPVTLGLQVAN 347 (519)
Q Consensus 329 yni~s-~~~~~i~~~~~~~~ 347 (519)
|++++ +...+...+...+.
T Consensus 213 ~~~~g~~~~~s~~e~~~~~~ 232 (308)
T 1qyc_A 213 LYLRLPANTLSLNELVALWE 232 (308)
T ss_dssp EECCCGGGEEEHHHHHHHHH
T ss_pred EEEeCCCCccCHHHHHHHHH
Confidence 77764 33344333444443
|
| >3d7l_A LIN1944 protein; APC89317, structural genomics, PS protein structure initiative, midwest center for structural genomics, MCSG; 2.06A {Listeria innocua} | Back alignment and structure |
|---|
Probab=99.81 E-value=2e-19 Score=168.97 Aligned_cols=183 Identities=15% Similarity=0.192 Sum_probs=135.3
Q ss_pred CEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEEec
Q 010075 13 KTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVPG 92 (519)
Q Consensus 13 k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v~g 92 (519)
|+|+|||||||||++++++|+ .| .+|+++.|+.. .+.+
T Consensus 4 M~vlVtGasg~iG~~~~~~l~-~g---~~V~~~~r~~~--------------------------------------~~~~ 41 (202)
T 3d7l_A 4 MKILLIGASGTLGSAVKERLE-KK---AEVITAGRHSG--------------------------------------DVTV 41 (202)
T ss_dssp CEEEEETTTSHHHHHHHHHHT-TT---SEEEEEESSSS--------------------------------------SEEC
T ss_pred cEEEEEcCCcHHHHHHHHHHH-CC---CeEEEEecCcc--------------------------------------ceee
Confidence 389999999999999999999 88 67899888631 3578
Q ss_pred cCCCCCCCCChhhhHHHHhc---CccEEEEcCccCCc-------cccHHHHHHHhHHHHHHHHHHHHhc-cCCceEEEEe
Q 010075 93 DISSEDLGLKDSNLKEELWN---ELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKC-VKLKVFVHVS 161 (519)
Q Consensus 93 Dl~~~~lgls~~~~~~~l~~---~vdiViH~Aa~v~f-------~~~~~~~~~~Nv~gt~~ll~~a~~~-~~l~~~V~vS 161 (519)
|+++ .+..+.+++ ++|+|||+||.... .+.++..+++|+.|+.++++.+.+. .+-.++|++|
T Consensus 42 D~~~-------~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~iv~~s 114 (202)
T 3d7l_A 42 DITN-------IDSIKKMYEQVGKVDAIVSATGSATFSPLTELTPEKNAVTISSKLGGQINLVLLGIDSLNDKGSFTLTT 114 (202)
T ss_dssp CTTC-------HHHHHHHHHHHCCEEEEEECCCCCCCCCGGGCCHHHHHHHHHTTTHHHHHHHHTTGGGEEEEEEEEEEC
T ss_pred ecCC-------HHHHHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHhhccHHHHHHHHHHHHHhccCCEEEEEc
Confidence 9995 333334444 58999999996532 1456677899999999999998764 1126899999
Q ss_pred cceeecCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcHHHHHHHHHHHH
Q 010075 162 TAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEML 241 (519)
Q Consensus 162 Ta~v~~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~Y~~sK~~aE~l 241 (519)
|.+.+... .....|+.||+..|.+
T Consensus 115 S~~~~~~~--------------------------------------------------------~~~~~Y~~sK~~~~~~ 138 (202)
T 3d7l_A 115 GIMMEDPI--------------------------------------------------------VQGASAAMANGAVTAF 138 (202)
T ss_dssp CGGGTSCC--------------------------------------------------------TTCHHHHHHHHHHHHH
T ss_pred chhhcCCC--------------------------------------------------------CccHHHHHHHHHHHHH
Confidence 97653211 2245799999999999
Q ss_pred HHHhh----cCCcEEEEecCccccCCCCCCCcccccccccHHHHHHhhcCCceeeccCCCceeeeeeHHHHHHHHHHHHH
Q 010075 242 MQQSK----ENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMIVAMV 317 (519)
Q Consensus 242 v~~~~----~~lp~~IvRPs~V~g~~~~p~~gw~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~d~vpVDdva~aii~a~~ 317 (519)
++.+. .+++++++||+.++++... . ++.....++++++|+|++++.++.
T Consensus 139 ~~~~~~e~~~gi~v~~v~pg~v~~~~~~------------------~---------~~~~~~~~~~~~~dva~~~~~~~~ 191 (202)
T 3d7l_A 139 AKSAAIEMPRGIRINTVSPNVLEESWDK------------------L---------EPFFEGFLPVPAAKVARAFEKSVF 191 (202)
T ss_dssp HHHHTTSCSTTCEEEEEEECCBGGGHHH------------------H---------GGGSTTCCCBCHHHHHHHHHHHHH
T ss_pred HHHHHHHccCCeEEEEEecCccCCchhh------------------h---------hhhccccCCCCHHHHHHHHHHhhh
Confidence 98762 3799999999999886321 0 011123568999999999988873
Q ss_pred HhccCCCCCcEEEe
Q 010075 318 AHAKQPSDANIYHV 331 (519)
Q Consensus 318 ~~~~~~~~~~iyni 331 (519)
.. ..+++||+
T Consensus 192 -~~---~~G~~~~v 201 (202)
T 3d7l_A 192 -GA---QTGESYQV 201 (202)
T ss_dssp -SC---CCSCEEEE
T ss_pred -cc---ccCceEec
Confidence 21 13578887
|
| >1edo_A Beta-keto acyl carrier protein reductase; nucleotide fold, rossmann fold, oxidoreductase; HET: NAP; 2.30A {Brassica napus} SCOP: c.2.1.2 PDB: 2cdh_G | Back alignment and structure |
|---|
Probab=99.81 E-value=5.2e-19 Score=171.10 Aligned_cols=219 Identities=13% Similarity=0.158 Sum_probs=148.0
Q ss_pred CCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEE-EecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEE
Q 010075 12 NKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLF-VRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFV 90 (519)
Q Consensus 12 ~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~L-vR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v 90 (519)
||+|+||||||+||++++++|++.| .+|+++ .|+... .+.+.++ +++ . ..++.++
T Consensus 1 ~k~vlVTGasggiG~~la~~l~~~G---~~v~~~~~r~~~~---~~~~~~~---------~~~-~--------~~~~~~~ 56 (244)
T 1edo_A 1 SPVVVVTGASRGIGKAIALSLGKAG---CKVLVNYARSAKA---AEEVSKQ---------IEA-Y--------GGQAITF 56 (244)
T ss_dssp CCEEEETTCSSHHHHHHHHHHHHTT---CEEEEEESSCHHH---HHHHHHH---------HHH-H--------TCEEEEE
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCC---CEEEEEcCCCHHH---HHHHHHH---------HHh-c--------CCcEEEE
Confidence 6899999999999999999999998 577775 565321 1222111 111 1 2568899
Q ss_pred eccCCCCCCCCChhhhHHHHhc-------CccEEEEcCccCCc-------cccHHHHHHHhHHHHHHHHHHHHhc---cC
Q 010075 91 PGDISSEDLGLKDSNLKEELWN-------ELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKC---VK 153 (519)
Q Consensus 91 ~gDl~~~~lgls~~~~~~~l~~-------~vdiViH~Aa~v~f-------~~~~~~~~~~Nv~gt~~ll~~a~~~---~~ 153 (519)
.+|+++ .+..+.+++ ++|+|||+||.... .+.++..+++|+.|+.++++.+.+. .+
T Consensus 57 ~~D~~~-------~~~~~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~ 129 (244)
T 1edo_A 57 GGDVSK-------EADVEAMMKTAIDAWGTIDVVVNNAGITRDTLLIRMKKSQWDEVIDLNLTGVFLCTQAATKIMMKKR 129 (244)
T ss_dssp ECCTTS-------HHHHHHHHHHHHHHSSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT
T ss_pred eCCCCC-------HHHHHHHHHHHHHHcCCCCEEEECCCCCCCcCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcC
Confidence 999995 232334433 79999999997642 2457788999999999999888653 35
Q ss_pred CceEEEEecceeecCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcHHHH
Q 010075 154 LKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVF 233 (519)
Q Consensus 154 l~~~V~vSTa~v~~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~Y~~ 233 (519)
..+||++||...+... .....|+.
T Consensus 130 ~~~iv~~sS~~~~~~~--------------------------------------------------------~~~~~Y~~ 153 (244)
T 1edo_A 130 KGRIINIASVVGLIGN--------------------------------------------------------IGQANYAA 153 (244)
T ss_dssp CEEEEEECCTHHHHCC--------------------------------------------------------TTCHHHHH
T ss_pred CCEEEEECChhhcCCC--------------------------------------------------------CCCccchh
Confidence 6899999997543211 12357999
Q ss_pred HHHHHHHHHHHh-----hcCCcEEEEecCccccCCCCCCCcccccccccHHHHHHhhcCCceeeccCCCceeeeeeHHHH
Q 010075 234 TKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMV 308 (519)
Q Consensus 234 sK~~aE~lv~~~-----~~~lp~~IvRPs~V~g~~~~p~~gw~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~d~vpVDdv 308 (519)
||+..|.+.+.+ ..+++++++|||.|.++..... ........... .....+++++|+
T Consensus 154 sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~---------~~~~~~~~~~~---------~~~~~~~~~~dv 215 (244)
T 1edo_A 154 AKAGVIGFSKTAAREGASRNINVNVVCPGFIASDMTAKL---------GEDMEKKILGT---------IPLGRTGQPENV 215 (244)
T ss_dssp HHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCSHHHHTT---------CHHHHHHHHTS---------CTTCSCBCHHHH
T ss_pred hHHHHHHHHHHHHHHhhhcCCEEEEEeeCccccchhhhc---------ChHHHHHHhhc---------CCCCCCCCHHHH
Confidence 999988887754 3579999999999987643211 11111111111 112347899999
Q ss_pred HHHHHHHHHHhccCCCCCcEEEecCCC
Q 010075 309 VNAMIVAMVAHAKQPSDANIYHVGSSL 335 (519)
Q Consensus 309 a~aii~a~~~~~~~~~~~~iyni~s~~ 335 (519)
|++++.++.........+++|++.+|.
T Consensus 216 a~~~~~l~~~~~~~~~~G~~~~v~gG~ 242 (244)
T 1edo_A 216 AGLVEFLALSPAASYITGQAFTIDGGI 242 (244)
T ss_dssp HHHHHHHHHCSGGGGCCSCEEEESTTT
T ss_pred HHHHHHHhCCCccCCcCCCEEEeCCCc
Confidence 999998884322221236899998873
|
| >3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} SCOP: c.2.1.0 PDB: 3sj7_A* | Back alignment and structure |
|---|
Probab=99.81 E-value=2.3e-18 Score=167.33 Aligned_cols=221 Identities=15% Similarity=0.156 Sum_probs=152.7
Q ss_pred cCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 010075 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (519)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (519)
+.+|+++||||+|+||++++++|++.| .+|+++.|.... ..+.+.++ +++ ...++.+
T Consensus 2 l~~k~~lVTGas~gIG~~ia~~l~~~G---~~V~~~~~~~~~--~~~~~~~~---------~~~---------~~~~~~~ 58 (246)
T 3osu_A 2 KMTKSALVTGASRGIGRSIALQLAEEG---YNVAVNYAGSKE--KAEAVVEE---------IKA---------KGVDSFA 58 (246)
T ss_dssp CCSCEEEETTCSSHHHHHHHHHHHHTT---CEEEEEESSCHH--HHHHHHHH---------HHH---------TTSCEEE
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHCC---CEEEEEeCCCHH--HHHHHHHH---------HHh---------cCCcEEE
Confidence 457999999999999999999999998 677887775321 12222211 111 1257889
Q ss_pred EeccCCCCCCCCChhhhHHHHh-------cCccEEEEcCccCCc-------cccHHHHHHHhHHHHHHHHHHHHhc---c
Q 010075 90 VPGDISSEDLGLKDSNLKEELW-------NELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKC---V 152 (519)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~-------~~vdiViH~Aa~v~f-------~~~~~~~~~~Nv~gt~~ll~~a~~~---~ 152 (519)
+.+|++++ +..+.++ .++|++||+||.... .+.++..+++|+.|+.++++.+... .
T Consensus 59 ~~~Dv~d~-------~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~ 131 (246)
T 3osu_A 59 IQANVADA-------DEVKAMIKEVVSQFGSLDVLVNNAGITRDNLLMRMKEQEWDDVIDTNLKGVFNCIQKATPQMLRQ 131 (246)
T ss_dssp EECCTTCH-------HHHHHHHHHHHHHHSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH
T ss_pred EEccCCCH-------HHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc
Confidence 99999953 3233443 379999999997642 2567788999999999999988321 2
Q ss_pred CCceEEEEecceeecCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcHHH
Q 010075 153 KLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYV 232 (519)
Q Consensus 153 ~l~~~V~vSTa~v~~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~Y~ 232 (519)
+..++|++||...+... .....|+
T Consensus 132 ~~g~iv~isS~~~~~~~--------------------------------------------------------~~~~~Y~ 155 (246)
T 3osu_A 132 RSGAIINLSSVVGAVGN--------------------------------------------------------PGQANYV 155 (246)
T ss_dssp TCEEEEEECCHHHHHCC--------------------------------------------------------TTCHHHH
T ss_pred CCCEEEEEcchhhcCCC--------------------------------------------------------CCChHHH
Confidence 56799999997654211 2245799
Q ss_pred HHHHHHHHHHHHh-----hcCCcEEEEecCccccCCCCCCCcccccccccHHHHHHhhcCCceeeccCCCceeeeeeHHH
Q 010075 233 FTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDM 307 (519)
Q Consensus 233 ~sK~~aE~lv~~~-----~~~lp~~IvRPs~V~g~~~~p~~gw~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~d~vpVDd 307 (519)
.||+..+.+.+.+ ..++++..++||.|.++.....+ .........+ .....+...+|
T Consensus 156 ~sK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~---------~~~~~~~~~~---------~p~~r~~~~~d 217 (246)
T 3osu_A 156 ATKAGVIGLTKSAARELASRGITVNAVAPGFIVSDMTDALS---------DELKEQMLTQ---------IPLARFGQDTD 217 (246)
T ss_dssp HHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBGGGCCSCSC---------HHHHHHHHTT---------CTTCSCBCHHH
T ss_pred HHHHHHHHHHHHHHHHhcccCeEEEEEEECCCcCCcccccC---------HHHHHHHHhc---------CCCCCCcCHHH
Confidence 9999888887754 45799999999999887543221 1222222222 12234677899
Q ss_pred HHHHHHHHHHHhccCCCCCcEEEecCCC
Q 010075 308 VVNAMIVAMVAHAKQPSDANIYHVGSSL 335 (519)
Q Consensus 308 va~aii~a~~~~~~~~~~~~iyni~s~~ 335 (519)
+|++++.++..... .-.++++++.+|.
T Consensus 218 va~~v~~l~s~~~~-~itG~~i~vdgG~ 244 (246)
T 3osu_A 218 IANTVAFLASDKAK-YITGQTIHVNGGM 244 (246)
T ss_dssp HHHHHHHHTSGGGT-TCCSCEEEESTTS
T ss_pred HHHHHHHHhCcccc-CCCCCEEEeCCCc
Confidence 99999988864332 2247899998873
|
| >3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A* | Back alignment and structure |
|---|
Probab=99.81 E-value=9.6e-19 Score=171.60 Aligned_cols=233 Identities=16% Similarity=0.165 Sum_probs=154.0
Q ss_pred cCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 010075 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (519)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (519)
++||+|+||||||+||++++++|++.| .+|+++.|+... .+.+.+ .+++.. ..++.+
T Consensus 5 l~~k~vlVTGas~gIG~~ia~~l~~~G---~~V~~~~r~~~~---~~~~~~---------~l~~~~--------~~~~~~ 61 (263)
T 3ai3_A 5 ISGKVAVITGSSSGIGLAIAEGFAKEG---AHIVLVARQVDR---LHEAAR---------SLKEKF--------GVRVLE 61 (263)
T ss_dssp CTTCEEEEESCSSHHHHHHHHHHHHTT---CEEEEEESCHHH---HHHHHH---------HHHHHH--------CCCEEE
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCC---CEEEEEcCCHHH---HHHHHH---------HHHHhc--------CCceEE
Confidence 578999999999999999999999998 678999886421 122211 111111 246889
Q ss_pred EeccCCCCCCCCChhhhHHHHh-------cCccEEEEcCccCCc-------cccHHHHHHHhHHHHHHHHHHHHhc---c
Q 010075 90 VPGDISSEDLGLKDSNLKEELW-------NELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKC---V 152 (519)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~-------~~vdiViH~Aa~v~f-------~~~~~~~~~~Nv~gt~~ll~~a~~~---~ 152 (519)
+.+|++++ +..+.++ .++|+|||+||.... .+.++..+++|+.|+.++++.+... .
T Consensus 62 ~~~D~~~~-------~~~~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~ 134 (263)
T 3ai3_A 62 VAVDVATP-------EGVDAVVESVRSSFGGADILVNNAGTGSNETIMEAADEKWQFYWELLVMAAVRLARGLVPGMRAR 134 (263)
T ss_dssp EECCTTSH-------HHHHHHHHHHHHHHSSCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH
T ss_pred EEcCCCCH-------HHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc
Confidence 99999953 3233443 379999999997542 2467788999999999998887531 2
Q ss_pred CCceEEEEecceeecCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcHHH
Q 010075 153 KLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYV 232 (519)
Q Consensus 153 ~l~~~V~vSTa~v~~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~Y~ 232 (519)
+..++|++||...+... .....|+
T Consensus 135 ~~g~iv~isS~~~~~~~--------------------------------------------------------~~~~~Y~ 158 (263)
T 3ai3_A 135 GGGAIIHNASICAVQPL--------------------------------------------------------WYEPIYN 158 (263)
T ss_dssp TCEEEEEECCGGGTSCC--------------------------------------------------------TTCHHHH
T ss_pred CCcEEEEECchhhcCCC--------------------------------------------------------CCcchHH
Confidence 56899999998765421 1235799
Q ss_pred HHHHHHHHHHHHh-----hcCCcEEEEecCccccCCCCCC-Ccccccccc-cHHHHHHhhcCCceeeccCCCceeeeeeH
Q 010075 233 FTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPF-PGWVEDLKT-INTLFVASAQGNLRCLVGETKVIMDVIPV 305 (519)
Q Consensus 233 ~sK~~aE~lv~~~-----~~~lp~~IvRPs~V~g~~~~p~-~gw~~~~~~-~~~~i~~~~~g~~~~~~~~~~~~~d~vpV 305 (519)
.||+..|.+.+.+ ..++++.++|||.|.++..... +.+...... ..........+ . .....++++
T Consensus 159 ~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~--~p~~~~~~~ 230 (263)
T 3ai3_A 159 VTKAALMMFSKTLATEVIKDNIRVNCINPGLILTPDWIKTAKELTKDNGGDWKGYLQSVADE------H--APIKRFASP 230 (263)
T ss_dssp HHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCHHHHHHHHHHTTTTTCCHHHHHHHHHHH------H--CTTCSCBCH
T ss_pred HHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccCcchhhhhHhhhcccCCcHHHHHHHHHhc------C--CCCCCCcCH
Confidence 9999999988765 3589999999999988643110 000000000 01111111110 0 112357899
Q ss_pred HHHHHHHHHHHHHhccCCCCCcEEEecCCCCC
Q 010075 306 DMVVNAMIVAMVAHAKQPSDANIYHVGSSLRN 337 (519)
Q Consensus 306 Ddva~aii~a~~~~~~~~~~~~iyni~s~~~~ 337 (519)
+|+|++++.++.... ....+++|++.+|...
T Consensus 231 ~dvA~~~~~l~s~~~-~~~~G~~~~vdgG~~~ 261 (263)
T 3ai3_A 231 EELANFFVFLCSERA-TYSVGSAYFVDGGMLK 261 (263)
T ss_dssp HHHHHHHHHHTSTTC-TTCCSCEEEESTTCCC
T ss_pred HHHHHHHHHHcCccc-cCCCCcEEEECCCccc
Confidence 999999998875322 1123689999988543
|
| >1sby_A Alcohol dehydrogenase; ternary complex, NAD, trifluoroethanol, oxidoreductase; HET: NAD; 1.10A {Scaptodrosophila lebanonensis} SCOP: c.2.1.2 PDB: 1b14_A* 1b15_A* 1a4u_A* 1b2l_A* 1b16_A* 3rj5_A* 3rj9_A* 1mg5_A* | Back alignment and structure |
|---|
Probab=99.81 E-value=7e-19 Score=171.59 Aligned_cols=226 Identities=13% Similarity=0.180 Sum_probs=154.2
Q ss_pred cCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 010075 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (519)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (519)
++||+|+||||||+||++++++|++.|. ..|+++.|+... ...+++. +..+ ..++.+
T Consensus 3 l~~k~vlVtGas~gIG~~~a~~l~~~G~--~~v~~~~r~~~~-~~~~~l~-------------~~~~-------~~~~~~ 59 (254)
T 1sby_A 3 LTNKNVIFVAALGGIGLDTSRELVKRNL--KNFVILDRVENP-TALAELK-------------AINP-------KVNITF 59 (254)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTCC--SEEEEEESSCCH-HHHHHHH-------------HHCT-------TSEEEE
T ss_pred CCCcEEEEECCCChHHHHHHHHHHHCCC--cEEEEEecCchH-HHHHHHH-------------HhCC-------CceEEE
Confidence 4689999999999999999999999984 247888887642 1222222 1111 246889
Q ss_pred EeccCCCCCCCCChhhhHHHH-------hcCccEEEEcCccCCccccHHHHHHHhHHHHHHHHHHHHhc-c-C----Cce
Q 010075 90 VPGDISSEDLGLKDSNLKEEL-------WNELDIMVNSAAITKFDERYDVAFGINTLGVIHLVNFAKKC-V-K----LKV 156 (519)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l-------~~~vdiViH~Aa~v~f~~~~~~~~~~Nv~gt~~ll~~a~~~-~-~----l~~ 156 (519)
+.+|++++ .++ .+.+ ..++|+|||+||... .+.++..+++|+.|+.++++.+.+. . + ..+
T Consensus 60 ~~~D~~~~-----~~~-~~~~~~~~~~~~g~id~lv~~Ag~~~-~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~g~ 132 (254)
T 1sby_A 60 HTYDVTVP-----VAE-SKKLLKKIFDQLKTVDILINGAGILD-DHQIERTIAINFTGLVNTTTAILDFWDKRKGGPGGI 132 (254)
T ss_dssp EECCTTSC-----HHH-HHHHHHHHHHHHSCCCEEEECCCCCC-TTCHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEE
T ss_pred EEEecCCC-----hHH-HHHHHHHHHHhcCCCCEEEECCccCC-HHHHhhhheeeehhHHHHHHHHHHHHHHhcCCCCCE
Confidence 99999963 022 2222 247999999999753 4678899999999999999988642 1 1 357
Q ss_pred EEEEecceeecCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcHHHHHHH
Q 010075 157 FVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKT 236 (519)
Q Consensus 157 ~V~vSTa~v~~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~Y~~sK~ 236 (519)
+|++||...+... .....|+.||+
T Consensus 133 iv~isS~~~~~~~--------------------------------------------------------~~~~~Y~~sK~ 156 (254)
T 1sby_A 133 IANICSVTGFNAI--------------------------------------------------------HQVPVYSASKA 156 (254)
T ss_dssp EEEECCGGGTSCC--------------------------------------------------------TTSHHHHHHHH
T ss_pred EEEECchhhccCC--------------------------------------------------------CCchHHHHHHH
Confidence 9999998664321 12357999999
Q ss_pred HHHHHHHHh-----hcCCcEEEEecCccccCCCCCCCcccccccccHHHHHHhhcCCceeeccCCCceeeeeeHHHHHHH
Q 010075 237 MGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNA 311 (519)
Q Consensus 237 ~aE~lv~~~-----~~~lp~~IvRPs~V~g~~~~p~~gw~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~d~vpVDdva~a 311 (519)
..|.+.+.+ ..++++++++||.|.++.......|..... .+...... ..+.+++|+|++
T Consensus 157 a~~~~~~~la~~~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~----~~~~~~~~------------~~~~~~~dvA~~ 220 (254)
T 1sby_A 157 AVVSFTNSLAKLAPITGVTAYSINPGITRTPLVHTFNSWLDVEP----RVAELLLS------------HPTQTSEQCGQN 220 (254)
T ss_dssp HHHHHHHHHHHHHHHHSEEEEEEEECSEESHHHHSCCCGGGSCT----THHHHHTT------------SCCEEHHHHHHH
T ss_pred HHHHHHHHHHHHhccCCeEEEEEecCCccCccccccchhhhhhH----HHHHHHhc------------CCCCCHHHHHHH
Confidence 999988765 258999999999998865332222221100 01111110 123489999999
Q ss_pred HHHHHHHhccCCCCCcEEEecCCCCCchhH
Q 010075 312 MIVAMVAHAKQPSDANIYHVGSSLRNPVTL 341 (519)
Q Consensus 312 ii~a~~~~~~~~~~~~iyni~s~~~~~i~~ 341 (519)
++.++... . .+++|++.+|...++.|
T Consensus 221 i~~~~~~~--~--~G~~~~v~gG~~~~~~~ 246 (254)
T 1sby_A 221 FVKAIEAN--K--NGAIWKLDLGTLEAIEW 246 (254)
T ss_dssp HHHHHHHC--C--TTCEEEEETTEEEECCC
T ss_pred HHHHHHcC--C--CCCEEEEeCCceeEecc
Confidence 99888632 1 36899999886556655
|
| >2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain dehydrogenase/reductase, steroid metabolism, LIP metabolism, structural genomics; HET: NAD; 2.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.81 E-value=6.1e-19 Score=172.66 Aligned_cols=228 Identities=11% Similarity=0.061 Sum_probs=148.6
Q ss_pred cCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 010075 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (519)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (519)
+++|+|+||||||+||+++++.|++.| .+|+++.|+... .+++.+++ .+.... ......++.+
T Consensus 5 ~~~k~vlITGasggiG~~la~~l~~~G---~~V~~~~r~~~~---~~~~~~~~---------~~~~~~--~~~~~~~~~~ 67 (264)
T 2pd6_A 5 LRSALALVTGAGSGIGRAVSVRLAGEG---ATVAACDLDRAA---AQETVRLL---------GGPGSK--EGPPRGNHAA 67 (264)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTT---CEEEEEESSHHH---HHHHHHTC-----------------------CCEE
T ss_pred cCCCEEEEECCCChHHHHHHHHHHHCC---CEEEEEeCChHH---HHHHHHHH---------HhcCcc--ccccCcceEE
Confidence 678999999999999999999999998 678999886422 12211110 000000 0000146889
Q ss_pred EeccCCCCCCCCChhhhHHHHhc-------Cc-cEEEEcCccCCc-------cccHHHHHHHhHHHHHHHHHHHHhc---
Q 010075 90 VPGDISSEDLGLKDSNLKEELWN-------EL-DIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKC--- 151 (519)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~~-------~v-diViH~Aa~v~f-------~~~~~~~~~~Nv~gt~~ll~~a~~~--- 151 (519)
+.+|++++ +..+.+++ ++ |+|||+||.... .+.++..+++|+.|+.++++++.+.
T Consensus 68 ~~~D~~~~-------~~~~~~~~~~~~~~g~i~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~ 140 (264)
T 2pd6_A 68 FQADVSEA-------RAARCLLEQVQACFSRPPSVVVSCAGITQDEFLLHMSEDDWDKVIAVNLKGTFLVTQAAAQALVS 140 (264)
T ss_dssp EECCTTSH-------HHHHHHHHHHHHHHSSCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHH
T ss_pred EEecCCCH-------HHHHHHHHHHHHHhCCCCeEEEECCCcCCCcchhhCCHHHHHHHHhhccHHHHHHHHHHHHHHHh
Confidence 99999953 32233333 45 999999997643 2467788999999999999988653
Q ss_pred cC-CceEEEEecceeecCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcH
Q 010075 152 VK-LKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNT 230 (519)
Q Consensus 152 ~~-l~~~V~vSTa~v~~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~ 230 (519)
.+ ..+||++||....... .....
T Consensus 141 ~~~~g~iv~isS~~~~~~~--------------------------------------------------------~~~~~ 164 (264)
T 2pd6_A 141 NGCRGSIINISSIVGKVGN--------------------------------------------------------VGQTN 164 (264)
T ss_dssp HTCCEEEEEECCTHHHHCC--------------------------------------------------------TTBHH
T ss_pred cCCCceEEEECChhhccCC--------------------------------------------------------CCChh
Confidence 13 5689999997543211 22457
Q ss_pred HHHHHHHHHHHHHHh-----hcCCcEEEEecCccccCCCCCCCcccccccccHHHHHHhhcCCceeeccCCCceeeeeeH
Q 010075 231 YVFTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPV 305 (519)
Q Consensus 231 Y~~sK~~aE~lv~~~-----~~~lp~~IvRPs~V~g~~~~p~~gw~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~d~vpV 305 (519)
|+.||+..|.+++.+ ..+++++++|||.|+++.....+. .+......+ .....++++
T Consensus 165 Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~---------~~~~~~~~~---------~~~~~~~~~ 226 (264)
T 2pd6_A 165 YAASKAGVIGLTQTAARELGRHGIRCNSVLPGFIATPMTQKVPQ---------KVVDKITEM---------IPMGHLGDP 226 (264)
T ss_dssp HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSCC-------------------CTGGG---------CTTCSCBCH
T ss_pred hHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeecccccchhhcCH---------HHHHHHHHh---------CCCCCCCCH
Confidence 999999999888765 358999999999999876432110 011111111 112346789
Q ss_pred HHHHHHHHHHHHHhccCCCCCcEEEecCCCC
Q 010075 306 DMVVNAMIVAMVAHAKQPSDANIYHVGSSLR 336 (519)
Q Consensus 306 Ddva~aii~a~~~~~~~~~~~~iyni~s~~~ 336 (519)
+|+|++++.++..... ...++++++.+|..
T Consensus 227 ~dva~~~~~l~~~~~~-~~~G~~~~v~gg~~ 256 (264)
T 2pd6_A 227 EDVADVVAFLASEDSG-YITGTSVEVTGGLF 256 (264)
T ss_dssp HHHHHHHHHHHSGGGT-TCCSCEEEESTTC-
T ss_pred HHHHHHHHHHcCCccc-CCCCCEEEECCCce
Confidence 9999999998864322 22468999988843
|
| >1h5q_A NADP-dependent mannitol dehydrogenase; oxidoreductase, mannitol metabolism; HET: NAP; 1.50A {Agaricus bisporus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.81 E-value=1.6e-18 Score=169.68 Aligned_cols=227 Identities=14% Similarity=0.135 Sum_probs=152.9
Q ss_pred cCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 010075 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (519)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (519)
+++|+|+||||||+||++++++|++.| .+|+++.|+..... +.+. .+.++. ..++.+
T Consensus 12 ~~~k~vlITGasggiG~~~a~~l~~~G---~~V~~~~r~~~~~~--~~~~----------~l~~~~--------~~~~~~ 68 (265)
T 1h5q_A 12 FVNKTIIVTGGNRGIGLAFTRAVAAAG---ANVAVIYRSAADAV--EVTE----------KVGKEF--------GVKTKA 68 (265)
T ss_dssp CTTEEEEEETTTSHHHHHHHHHHHHTT---EEEEEEESSCTTHH--HHHH----------HHHHHH--------TCCEEE
T ss_pred cCCCEEEEECCCchHHHHHHHHHHHCC---CeEEEEeCcchhhH--HHHH----------HHHHhc--------CCeeEE
Confidence 678999999999999999999999998 68899999654321 1111 111111 256889
Q ss_pred EeccCCCCCCCCChhhhHHHHh-------cCccEEEEcCccCCc-------cccHHHHHHHhHHHHHHHHHHHHhc----
Q 010075 90 VPGDISSEDLGLKDSNLKEELW-------NELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKC---- 151 (519)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~-------~~vdiViH~Aa~v~f-------~~~~~~~~~~Nv~gt~~ll~~a~~~---- 151 (519)
+.+|++++ +..+.++ .++|+|||+||.... .+.++..+++|+.|+.++++.+.+.
T Consensus 69 ~~~Dl~~~-------~~~~~~~~~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~ 141 (265)
T 1h5q_A 69 YQCDVSNT-------DIVTKTIQQIDADLGPISGLIANAGVSVVKPATELTHEDFAFVYDVNVFGVFNTCRAVAKLWLQK 141 (265)
T ss_dssp EECCTTCH-------HHHHHHHHHHHHHSCSEEEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH
T ss_pred EEeeCCCH-------HHHHHHHHHHHHhcCCCCEEEECCCcCCCCchhhCCHHHHHHHHhhhhHhHHHHHHHHHHHHHhc
Confidence 99999963 2222332 359999999997542 2457778999999999999987643
Q ss_pred cCCceEEEEecceeecCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcHH
Q 010075 152 VKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTY 231 (519)
Q Consensus 152 ~~l~~~V~vSTa~v~~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~Y 231 (519)
+...+||++||...+....+ .... ..+...|
T Consensus 142 ~~~~~iv~~sS~~~~~~~~~--~~~~-----------------------------------------------~~~~~~Y 172 (265)
T 1h5q_A 142 QQKGSIVVTSSMSSQIINQS--SLNG-----------------------------------------------SLTQVFY 172 (265)
T ss_dssp TCCEEEEEECCGGGTSCCEE--ETTE-----------------------------------------------ECSCHHH
T ss_pred CCCceEEEeCCchhhccccc--cccc-----------------------------------------------ccccccc
Confidence 22478999999865432110 0000 0234679
Q ss_pred HHHHHHHHHHHHHh-----hcCCcEEEEecCccccCCCCCCCcccccccccHHHHHHhhcCCceeeccCCCceeeeeeHH
Q 010075 232 VFTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVD 306 (519)
Q Consensus 232 ~~sK~~aE~lv~~~-----~~~lp~~IvRPs~V~g~~~~p~~gw~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~d~vpVD 306 (519)
+.||+..|.+++.+ ..+++++++|||.|.++..... ........... .....+++++
T Consensus 173 ~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~---------~~~~~~~~~~~---------~~~~~~~~~~ 234 (265)
T 1h5q_A 173 NSSKAACSNLVKGLAAEWASAGIRVNALSPGYVNTDQTAHM---------DKKIRDHQASN---------IPLNRFAQPE 234 (265)
T ss_dssp HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCGGGGGS---------CHHHHHHHHHT---------CTTSSCBCGG
T ss_pred HHHHHHHHHHHHHHHHHHHhcCcEEEEEecCcccccccccc---------chhHHHHHHhc---------CcccCCCCHH
Confidence 99999999998765 3479999999999988754221 11111111111 0112468899
Q ss_pred HHHHHHHHHHHHhccCCCCCcEEEecCC
Q 010075 307 MVVNAMIVAMVAHAKQPSDANIYHVGSS 334 (519)
Q Consensus 307 dva~aii~a~~~~~~~~~~~~iyni~s~ 334 (519)
|+|++++.++..... ...+++|++.+|
T Consensus 235 dva~~~~~l~~~~~~-~~~G~~~~v~gG 261 (265)
T 1h5q_A 235 EMTGQAILLLSDHAT-YMTGGEYFIDGG 261 (265)
T ss_dssp GGHHHHHHHHSGGGT-TCCSCEEEECTT
T ss_pred HHHHHHHhhccCchh-cCcCcEEEecCC
Confidence 999999998864322 223689999887
|
| >3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.81 E-value=6.5e-19 Score=171.25 Aligned_cols=219 Identities=15% Similarity=0.124 Sum_probs=147.9
Q ss_pred hhcCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCce
Q 010075 8 EFLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKI 87 (519)
Q Consensus 8 ~~~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v 87 (519)
..+++|+|+||||+|+||+++++.|++.| .+|+++.|+... .+++. ++. ..++
T Consensus 10 ~~~~~k~vlVTGas~gIG~~~a~~l~~~G---~~V~~~~r~~~~---~~~~~-------------~~~--------~~~~ 62 (249)
T 3f9i_A 10 IDLTGKTSLITGASSGIGSAIARLLHKLG---SKVIISGSNEEK---LKSLG-------------NAL--------KDNY 62 (249)
T ss_dssp CCCTTCEEEETTTTSHHHHHHHHHHHHTT---CEEEEEESCHHH---HHHHH-------------HHH--------CSSE
T ss_pred ccCCCCEEEEECCCChHHHHHHHHHHHCC---CEEEEEcCCHHH---HHHHH-------------HHh--------ccCc
Confidence 45689999999999999999999999998 678999886321 12221 111 2578
Q ss_pred EEEeccCCCCCCCCChhhhHHHHhc---CccEEEEcCccCCc-------cccHHHHHHHhHHHHHHHHHHHHhc---cCC
Q 010075 88 TFVPGDISSEDLGLKDSNLKEELWN---ELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKC---VKL 154 (519)
Q Consensus 88 ~~v~gDl~~~~lgls~~~~~~~l~~---~vdiViH~Aa~v~f-------~~~~~~~~~~Nv~gt~~ll~~a~~~---~~l 154 (519)
.++.+|+++ .+....+.+ ++|+|||+||.... .+.++..+++|+.|+.++++.+... .+.
T Consensus 63 ~~~~~D~~~-------~~~~~~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~ 135 (249)
T 3f9i_A 63 TIEVCNLAN-------KEECSNLISKTSNLDILVCNAGITSDTLAIRMKDQDFDKVIDINLKANFILNREAIKKMIQKRY 135 (249)
T ss_dssp EEEECCTTS-------HHHHHHHHHTCSCCSEEEECCC-------------CHHHHHHHHTHHHHHHHHHHHHHHHHHTC
T ss_pred cEEEcCCCC-------HHHHHHHHHhcCCCCEEEECCCCCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 899999995 333334444 69999999997542 3578889999999999998877432 355
Q ss_pred ceEEEEecceeecCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcHHHHH
Q 010075 155 KVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFT 234 (519)
Q Consensus 155 ~~~V~vSTa~v~~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~Y~~s 234 (519)
.++|++||...+... .....|+.|
T Consensus 136 g~iv~isS~~~~~~~--------------------------------------------------------~~~~~Y~~s 159 (249)
T 3f9i_A 136 GRIINISSIVGIAGN--------------------------------------------------------PGQANYCAS 159 (249)
T ss_dssp EEEEEECCCCC--CC--------------------------------------------------------SCSHHHHHH
T ss_pred cEEEEEccHHhccCC--------------------------------------------------------CCCchhHHH
Confidence 799999998655321 223579999
Q ss_pred HHHHHHHHHHh-----hcCCcEEEEecCccccCCCCCCCcccccccccHHHHHHhhcCCceeeccCCCceeeeeeHHHHH
Q 010075 235 KTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVV 309 (519)
Q Consensus 235 K~~aE~lv~~~-----~~~lp~~IvRPs~V~g~~~~p~~gw~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~d~vpVDdva 309 (519)
|+..|.+++.+ ..++++.+++||.|.++...... ......... ......+.+++|+|
T Consensus 160 K~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~---------~~~~~~~~~---------~~~~~~~~~~~dva 221 (249)
T 3f9i_A 160 KAGLIGMTKSLSYEVATRGITVNAVAPGFIKSDMTDKLN---------EKQREAIVQ---------KIPLGTYGIPEDVA 221 (249)
T ss_dssp HHHHHHHHHHHHHHHGGGTEEEEEEEECCBC------CC---------HHHHHHHHH---------HCTTCSCBCHHHHH
T ss_pred HHHHHHHHHHHHHHHHHcCcEEEEEecCccccCcccccC---------HHHHHHHHh---------cCCCCCCcCHHHHH
Confidence 99988887754 35799999999999876542211 111111111 11234578899999
Q ss_pred HHHHHHHHHhccCCCCCcEEEecCCC
Q 010075 310 NAMIVAMVAHAKQPSDANIYHVGSSL 335 (519)
Q Consensus 310 ~aii~a~~~~~~~~~~~~iyni~s~~ 335 (519)
++++.++..... .-.++++++.+|.
T Consensus 222 ~~~~~l~s~~~~-~~tG~~~~vdgG~ 246 (249)
T 3f9i_A 222 YAVAFLASNNAS-YITGQTLHVNGGM 246 (249)
T ss_dssp HHHHHHHSGGGT-TCCSCEEEESTTS
T ss_pred HHHHHHcCCccC-CccCcEEEECCCE
Confidence 999998864432 2247899998874
|
| >2d1y_A Hypothetical protein TT0321; strucrtural genomics, thermus thermophilus HB8, structural genomics, NPPSFA; HET: NAD; 1.65A {Thermus thermophilus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.80 E-value=1.8e-18 Score=169.08 Aligned_cols=221 Identities=14% Similarity=0.099 Sum_probs=148.9
Q ss_pred cCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 010075 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (519)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (519)
+++|+|+||||||+||++++++|++.| .+|+++.|+... +.+.+++ .+ .+
T Consensus 4 l~~k~vlVTGas~gIG~~ia~~l~~~G---~~V~~~~r~~~~----~~~~~~~----------------------~~-~~ 53 (256)
T 2d1y_A 4 FAGKGVLVTGGARGIGRAIAQAFAREG---ALVALCDLRPEG----KEVAEAI----------------------GG-AF 53 (256)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHTT---CEEEEEESSTTH----HHHHHHH----------------------TC-EE
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCC---CEEEEEeCChhH----HHHHHHh----------------------hC-CE
Confidence 578999999999999999999999998 678999987643 1111110 13 78
Q ss_pred EeccCCCCCCCCChhhhHHHHh-------cCccEEEEcCccCCc-------cccHHHHHHHhHHHHHHHHHHHHhc---c
Q 010075 90 VPGDISSEDLGLKDSNLKEELW-------NELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKC---V 152 (519)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~-------~~vdiViH~Aa~v~f-------~~~~~~~~~~Nv~gt~~ll~~a~~~---~ 152 (519)
+.+|++++ +..+.++ .++|+|||+||.... .+.++..+++|+.|+.++++.+.+. .
T Consensus 54 ~~~D~~~~-------~~~~~~~~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~ 126 (256)
T 2d1y_A 54 FQVDLEDE-------RERVRFVEEAAYALGRVDVLVNNAAIAAPGSALTVRLPEWRRVLEVNLTAPMHLSALAAREMRKV 126 (256)
T ss_dssp EECCTTCH-------HHHHHHHHHHHHHHSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTT
T ss_pred EEeeCCCH-------HHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc
Confidence 89999963 2222332 379999999997643 2457788999999999999887542 3
Q ss_pred CCceEEEEecceeecCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcHHH
Q 010075 153 KLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYV 232 (519)
Q Consensus 153 ~l~~~V~vSTa~v~~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~Y~ 232 (519)
+..++|++||....... .....|+
T Consensus 127 ~~g~iv~isS~~~~~~~--------------------------------------------------------~~~~~Y~ 150 (256)
T 2d1y_A 127 GGGAIVNVASVQGLFAE--------------------------------------------------------QENAAYN 150 (256)
T ss_dssp TCEEEEEECCGGGTSBC--------------------------------------------------------TTBHHHH
T ss_pred CCcEEEEEccccccCCC--------------------------------------------------------CCChhHH
Confidence 56899999998543211 1235799
Q ss_pred HHHHHHHHHHHHh-----hcCCcEEEEecCccccCCCCCCCcccccccccHHHHHHhhcCCceeeccCCCceeeeeeHHH
Q 010075 233 FTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDM 307 (519)
Q Consensus 233 ~sK~~aE~lv~~~-----~~~lp~~IvRPs~V~g~~~~p~~gw~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~d~vpVDd 307 (519)
.||+..|.+.+.+ ..++++.+++||.|.++.... +.... . ..+..............+++++|
T Consensus 151 ~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~---~~~~~------~---~~~~~~~~~~~~~~~~~~~~~~d 218 (256)
T 2d1y_A 151 ASKGGLVNLTRSLALDLAPLRIRVNAVAPGAIATEAVLE---AIALS------P---DPERTRRDWEDLHALRRLGKPEE 218 (256)
T ss_dssp HHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHH---HHC-----------------CHHHHTTSTTSSCBCHHH
T ss_pred HHHHHHHHHHHHHHHHHhhcCeEEEEEeeCCccCchhhh---ccccc------c---CCHHHHHHHHhcCCCCCCcCHHH
Confidence 9999999988765 347999999999987643210 00000 0 00000000111122346889999
Q ss_pred HHHHHHHHHHHhccCCCCCcEEEecCCCC
Q 010075 308 VVNAMIVAMVAHAKQPSDANIYHVGSSLR 336 (519)
Q Consensus 308 va~aii~a~~~~~~~~~~~~iyni~s~~~ 336 (519)
+|++++.++..... ...++++++.+|..
T Consensus 219 vA~~~~~l~s~~~~-~~~G~~~~v~gG~~ 246 (256)
T 2d1y_A 219 VAEAVLFLASEKAS-FITGAILPVDGGMT 246 (256)
T ss_dssp HHHHHHHHHSGGGT-TCCSCEEEESTTGG
T ss_pred HHHHHHHHhCchhc-CCCCCEEEECCCcc
Confidence 99999998864322 22368999988843
|
| >1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A* | Back alignment and structure |
|---|
Probab=99.80 E-value=1.5e-18 Score=170.05 Aligned_cols=212 Identities=15% Similarity=0.148 Sum_probs=148.2
Q ss_pred cCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 010075 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (519)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (519)
++||+|+||||||+||++++++|++.| .+|+++.|+... .+++.+ +. ..++.+
T Consensus 5 l~~k~vlVTGas~gIG~~ia~~l~~~G---~~V~~~~r~~~~---~~~~~~-------------~~--------~~~~~~ 57 (260)
T 1nff_A 5 LTGKVALVSGGARGMGASHVRAMVAEG---AKVVFGDILDEE---GKAMAA-------------EL--------ADAARY 57 (260)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHTT---CEEEEEESCHHH---HHHHHH-------------HT--------GGGEEE
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCC---CEEEEEeCCHHH---HHHHHH-------------Hh--------hcCceE
Confidence 678999999999999999999999998 678888886421 111111 11 134788
Q ss_pred EeccCCCCCCCCChhhhHHHHhc-------CccEEEEcCccCCc-------cccHHHHHHHhHHHHHHHHHHHHhc---c
Q 010075 90 VPGDISSEDLGLKDSNLKEELWN-------ELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKC---V 152 (519)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~~-------~vdiViH~Aa~v~f-------~~~~~~~~~~Nv~gt~~ll~~a~~~---~ 152 (519)
+.+|+++ .+..+.+++ ++|+|||+||.... .+.++..+++|+.|+.++++.+.+. .
T Consensus 58 ~~~D~~~-------~~~v~~~~~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~ 130 (260)
T 1nff_A 58 VHLDVTQ-------PAQWKAAVDTAVTAFGGLHVLVNNAGILNIGTIEDYALTEWQRILDVNLTGVFLGIRAVVKPMKEA 130 (260)
T ss_dssp EECCTTC-------HHHHHHHHHHHHHHHSCCCEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH
T ss_pred EEecCCC-------HHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc
Confidence 9999995 333334443 79999999997543 2467788999999997666654321 2
Q ss_pred CCceEEEEecceeecCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcHHH
Q 010075 153 KLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYV 232 (519)
Q Consensus 153 ~l~~~V~vSTa~v~~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~Y~ 232 (519)
+..++|++||...+... .....|+
T Consensus 131 ~~g~iv~isS~~~~~~~--------------------------------------------------------~~~~~Y~ 154 (260)
T 1nff_A 131 GRGSIINISSIEGLAGT--------------------------------------------------------VACHGYT 154 (260)
T ss_dssp TCEEEEEECCGGGTSCC--------------------------------------------------------TTBHHHH
T ss_pred CCCEEEEEeehhhcCCC--------------------------------------------------------CCchhHH
Confidence 56899999998654321 1235799
Q ss_pred HHHHHHHHHHHHh-----hcCCcEEEEecCccccCCCCCCCcccccccccHHHHHHhhcCCceeeccCCCceeeeeeHHH
Q 010075 233 FTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDM 307 (519)
Q Consensus 233 ~sK~~aE~lv~~~-----~~~lp~~IvRPs~V~g~~~~p~~gw~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~d~vpVDd 307 (519)
.||+..|.+.+.. ..+++++++|||.|.++... +... ... ......+++++|
T Consensus 155 ~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~----~~~~--------------~~~-----~~~~~~~~~~~d 211 (260)
T 1nff_A 155 ATKFAVRGLTKSTALELGPSGIRVNSIHPGLVKTPMTD----WVPE--------------DIF-----QTALGRAAEPVE 211 (260)
T ss_dssp HHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSGGGT----TSCT--------------TCS-----CCSSSSCBCHHH
T ss_pred HHHHHHHHHHHHHHHHhCccCcEEEEEEeCCCCCCccc----cchh--------------hHH-----hCccCCCCCHHH
Confidence 9999999988764 35899999999999887532 1000 000 011234688999
Q ss_pred HHHHHHHHHHHhccCCCCCcEEEecCCC
Q 010075 308 VVNAMIVAMVAHAKQPSDANIYHVGSSL 335 (519)
Q Consensus 308 va~aii~a~~~~~~~~~~~~iyni~s~~ 335 (519)
+|++++.++.... ....+++|++.+|.
T Consensus 212 vA~~v~~l~s~~~-~~~~G~~~~v~gG~ 238 (260)
T 1nff_A 212 VSNLVVYLASDES-SYSTGAEFVVDGGT 238 (260)
T ss_dssp HHHHHHHHHSGGG-TTCCSCEEEESTTG
T ss_pred HHHHHHHHhCccc-cCCcCCEEEECCCe
Confidence 9999999886432 22236899998873
|
| >1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A* | Back alignment and structure |
|---|
Probab=99.80 E-value=2.6e-18 Score=168.02 Aligned_cols=224 Identities=13% Similarity=0.089 Sum_probs=150.3
Q ss_pred cCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 010075 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (519)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (519)
+++|+|+||||||+||++++++|++.| .+|+++.|+.. ...+.+.++ +++. ..++.+
T Consensus 5 l~~k~vlITGasggiG~~~a~~l~~~G---~~V~~~~r~~~--~~~~~~~~~---------l~~~---------~~~~~~ 61 (261)
T 1gee_A 5 LEGKVVVITGSSTGLGKSMAIRFATEK---AKVVVNYRSKE--DEANSVLEE---------IKKV---------GGEAIA 61 (261)
T ss_dssp GTTCEEEETTCSSHHHHHHHHHHHHTT---CEEEEEESSCH--HHHHHHHHH---------HHHT---------TCEEEE
T ss_pred CCCCEEEEeCCCChHHHHHHHHHHHCC---CEEEEEcCCCh--HHHHHHHHH---------HHhc---------CCceEE
Confidence 678999999999999999999999998 67899988321 111222111 1110 246889
Q ss_pred EeccCCCCCCCCChhhhHHHHhc-------CccEEEEcCccCCc-------cccHHHHHHHhHHHHHHHHHHHHhc---c
Q 010075 90 VPGDISSEDLGLKDSNLKEELWN-------ELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKC---V 152 (519)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~~-------~vdiViH~Aa~v~f-------~~~~~~~~~~Nv~gt~~ll~~a~~~---~ 152 (519)
+.+|++++ +..+.+++ ++|+|||+||.... .+.++..+++|+.|+.++++.+.+. .
T Consensus 62 ~~~D~~~~-------~~~~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~ 134 (261)
T 1gee_A 62 VKGDVTVE-------SDVINLVQSAIKEFGKLDVMINNAGLENPVSSHEMSLSDWNKVIDTNLTGAFLGSREAIKYFVEN 134 (261)
T ss_dssp EECCTTSH-------HHHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHT
T ss_pred EECCCCCH-------HHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhC
Confidence 99999952 32233333 79999999997643 2457788999999999988876542 1
Q ss_pred C-CceEEEEecceeecCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcHH
Q 010075 153 K-LKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTY 231 (519)
Q Consensus 153 ~-l~~~V~vSTa~v~~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~Y 231 (519)
+ ..++|++||....... .+...|
T Consensus 135 ~~~~~iv~isS~~~~~~~--------------------------------------------------------~~~~~Y 158 (261)
T 1gee_A 135 DIKGTVINMSSVHEKIPW--------------------------------------------------------PLFVHY 158 (261)
T ss_dssp TCCCEEEEECCGGGTSCC--------------------------------------------------------TTCHHH
T ss_pred CCCCEEEEeCCHHhcCCC--------------------------------------------------------CCccHH
Confidence 3 5799999997543210 234679
Q ss_pred HHHHHHHHHHHHHh-----hcCCcEEEEecCccccCCCCCCCcccccccccHHHHHHhhcCCceeeccCCCceeeeeeHH
Q 010075 232 VFTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVD 306 (519)
Q Consensus 232 ~~sK~~aE~lv~~~-----~~~lp~~IvRPs~V~g~~~~p~~gw~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~d~vpVD 306 (519)
+.||+..|.+++.+ ..+++++++|||.|.++.... + ............. .....+++++
T Consensus 159 ~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~---~----~~~~~~~~~~~~~---------~~~~~~~~~~ 222 (261)
T 1gee_A 159 AASKGGMKLMTETLALEYAPKGIRVNNIGPGAINTPINAE---K----FADPEQRADVESM---------IPMGYIGEPE 222 (261)
T ss_dssp HHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSGGGHH---H----HHSHHHHHHHHTT---------CTTSSCBCHH
T ss_pred HHHHHHHHHHHHHHHHHhcccCeEEEEEeeCCcCCchhhh---c----ccChhHHHHHHhc---------CCCCCCcCHH
Confidence 99999888887654 348999999999998864311 0 0001111111111 1123578999
Q ss_pred HHHHHHHHHHHHhccCCCCCcEEEecCCCC
Q 010075 307 MVVNAMIVAMVAHAKQPSDANIYHVGSSLR 336 (519)
Q Consensus 307 dva~aii~a~~~~~~~~~~~~iyni~s~~~ 336 (519)
|+|++++.++..... ...++++++.+|..
T Consensus 223 dva~~~~~l~~~~~~-~~~G~~~~v~gg~~ 251 (261)
T 1gee_A 223 EIAAVAAWLASSEAS-YVTGITLFADGGMT 251 (261)
T ss_dssp HHHHHHHHHHSGGGT-TCCSCEEEESTTGG
T ss_pred HHHHHHHHHhCcccc-CCCCcEEEEcCCcc
Confidence 999999998863322 22368999988743
|
| >3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.80 E-value=1.3e-18 Score=172.46 Aligned_cols=238 Identities=13% Similarity=0.119 Sum_probs=155.7
Q ss_pred cCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcc------cHHHHHHHHHhhhhhHHHHHhhhcccccccc
Q 010075 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADID------SAALRFQNEVLAKDVFNVLKEKWGTRLNSFI 83 (519)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~------~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~ 83 (519)
++||+++||||+|+||+++++.|++.| .+|+++.|+.... ...+++.+ . .+.+++ .
T Consensus 8 l~~k~~lVTGas~gIG~a~a~~l~~~G---~~V~~~~r~~~~~~~~~~~~~~~~~~~-~-----~~~~~~---------~ 69 (281)
T 3s55_A 8 FEGKTALITGGARGMGRSHAVALAEAG---ADIAICDRCENSDVVGYPLATADDLAE-T-----VALVEK---------T 69 (281)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHTT---CEEEEEECCSCCTTCSSCCCCHHHHHH-H-----HHHHHH---------T
T ss_pred cCCCEEEEeCCCchHHHHHHHHHHHCC---CeEEEEeCCccccccccccccHHHHHH-H-----HHHHHh---------c
Confidence 679999999999999999999999999 6789999974321 00112211 0 011111 1
Q ss_pred CCceEEEeccCCCCCCCCChhhhHHHHh-------cCccEEEEcCccCCc-------cccHHHHHHHhHHHHHHHHHHHH
Q 010075 84 SEKITFVPGDISSEDLGLKDSNLKEELW-------NELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAK 149 (519)
Q Consensus 84 ~~~v~~v~gDl~~~~lgls~~~~~~~l~-------~~vdiViH~Aa~v~f-------~~~~~~~~~~Nv~gt~~ll~~a~ 149 (519)
..++.++.+|++++ +..+.++ .++|++||+||.... .+.++..+++|+.|+.++++.+.
T Consensus 70 ~~~~~~~~~Dv~~~-------~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~ 142 (281)
T 3s55_A 70 GRRCISAKVDVKDR-------AALESFVAEAEDTLGGIDIAITNAGISTIALLPEVESAQWDEVIGTNLTGTFNTIAAVA 142 (281)
T ss_dssp TCCEEEEECCTTCH-------HHHHHHHHHHHHHHTCCCEEEECCCCCCCCCTTCCCHHHHHHHHHHHTHHHHHHHHHHH
T ss_pred CCeEEEEeCCCCCH-------HHHHHHHHHHHHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHH
Confidence 35789999999963 3233333 379999999997642 25678889999999999998864
Q ss_pred hc---cCCceEEEEecceeecCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCC
Q 010075 150 KC---VKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHG 226 (519)
Q Consensus 150 ~~---~~l~~~V~vSTa~v~~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~ 226 (519)
.. .+..++|++||...+... .
T Consensus 143 ~~~~~~~~g~iv~isS~~~~~~~--------------------------------------------------------~ 166 (281)
T 3s55_A 143 PGMIKRNYGRIVTVSSMLGHSAN--------------------------------------------------------F 166 (281)
T ss_dssp HHHHHHTCEEEEEECCGGGGSCC--------------------------------------------------------T
T ss_pred HHHHHcCCCEEEEECChhhcCCC--------------------------------------------------------C
Confidence 31 255799999998654321 2
Q ss_pred CCcHHHHHHHHHHHHHHHh-----hcCCcEEEEecCccccCCCCCCC---ccccccccc-HHHHHHhhcCCceeeccCCC
Q 010075 227 WPNTYVFTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFP---GWVEDLKTI-NTLFVASAQGNLRCLVGETK 297 (519)
Q Consensus 227 ~~n~Y~~sK~~aE~lv~~~-----~~~lp~~IvRPs~V~g~~~~p~~---gw~~~~~~~-~~~i~~~~~g~~~~~~~~~~ 297 (519)
....|+.||+..+.+.+.+ ..++++..++||.|.++...+.. .+....... ..-.... +.....
T Consensus 167 ~~~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~ 239 (281)
T 3s55_A 167 AQASYVSSKWGVIGLTKCAAHDLVGYGITVNAVAPGNIETPMTHNDFVFGTMRPDLEKPTLKDVESV-------FASLHL 239 (281)
T ss_dssp TCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCSTTTSSHHHHHC-------CCHHHHHHH-------HHHHCS
T ss_pred CCchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcccCccccchhhhccccccccccchhHHHHH-------HHhhhc
Confidence 2357999999999888765 34799999999999987653200 000000000 0000000 001111
Q ss_pred ceeeeeeHHHHHHHHHHHHHHhccCCCCCcEEEecCCCC
Q 010075 298 VIMDVIPVDMVVNAMIVAMVAHAKQPSDANIYHVGSSLR 336 (519)
Q Consensus 298 ~~~d~vpVDdva~aii~a~~~~~~~~~~~~iyni~s~~~ 336 (519)
....+..++|+|++++.++..... .-.++++++.+|..
T Consensus 240 ~~~~~~~p~dvA~~v~~L~s~~~~-~itG~~i~vdgG~~ 277 (281)
T 3s55_A 240 QYAPFLKPEEVTRAVLFLVDEASS-HITGTVLPIDAGAT 277 (281)
T ss_dssp SSCSCBCHHHHHHHHHHHHSGGGT-TCCSCEEEESTTGG
T ss_pred cCcCCCCHHHHHHHHHHHcCCccc-CCCCCEEEECCCcc
Confidence 225688999999999998864332 22478999998844
|
| >1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A* | Back alignment and structure |
|---|
Probab=99.80 E-value=2.5e-18 Score=171.89 Aligned_cols=222 Identities=13% Similarity=0.099 Sum_probs=150.4
Q ss_pred hcCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceE
Q 010075 9 FLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKIT 88 (519)
Q Consensus 9 ~~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~ 88 (519)
.++||+|+|||||||||++++++|++.| .+|+++.|+... .+.+. +.+++.. ..++.
T Consensus 23 ~l~~k~vlITGasggiG~~la~~L~~~G---~~V~~~~r~~~~---~~~~~---------~~l~~~~--------~~~~~ 79 (302)
T 1w6u_A 23 SFQGKVAFITGGGTGLGKGMTTLLSSLG---AQCVIASRKMDV---LKATA---------EQISSQT--------GNKVH 79 (302)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHTT---CEEEEEESCHHH---HHHHH---------HHHHHHH--------SSCEE
T ss_pred cCCCCEEEEECCCchHHHHHHHHHHHCC---CEEEEEeCCHHH---HHHHH---------HHHHHhc--------CCceE
Confidence 4688999999999999999999999998 678999886421 11111 1112111 25789
Q ss_pred EEeccCCCCCCCCChhhhHHHHh-------cCccEEEEcCccCCc-------cccHHHHHHHhHHHHHHHHHHHHhc---
Q 010075 89 FVPGDISSEDLGLKDSNLKEELW-------NELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKC--- 151 (519)
Q Consensus 89 ~v~gDl~~~~lgls~~~~~~~l~-------~~vdiViH~Aa~v~f-------~~~~~~~~~~Nv~gt~~ll~~a~~~--- 151 (519)
++.+|++++ +..+.++ .++|+|||+||.... .+.++..+++|+.|+.++++.+.+.
T Consensus 80 ~~~~Dl~~~-------~~~~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~ 152 (302)
T 1w6u_A 80 AIQCDVRDP-------DMVQNTVSELIKVAGHPNIVINNAAGNFISPTERLSPNAWKTITDIVLNGTAFVTLEIGKQLIK 152 (302)
T ss_dssp EEECCTTCH-------HHHHHHHHHHHHHTCSCSEEEECCCCCCCSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEeCCCCH-------HHHHHHHHHHHHHcCCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHH
Confidence 999999953 2222333 357999999996432 2457788999999999998887542
Q ss_pred -cCCceEEEEecceeecCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcH
Q 010075 152 -VKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNT 230 (519)
Q Consensus 152 -~~l~~~V~vSTa~v~~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~ 230 (519)
.+..++|++||.+.+... .+...
T Consensus 153 ~~~~~~iv~isS~~~~~~~--------------------------------------------------------~~~~~ 176 (302)
T 1w6u_A 153 AQKGAAFLSITTIYAETGS--------------------------------------------------------GFVVP 176 (302)
T ss_dssp TTCCEEEEEECCTHHHHCC--------------------------------------------------------TTCHH
T ss_pred hcCCCEEEEEcccccccCC--------------------------------------------------------CCcch
Confidence 245799999998664321 23457
Q ss_pred HHHHHHHHHHHHHHh-----hcCCcEEEEecCccccCCC-CCC-CcccccccccHHHHHHhhcCCceeeccCCCceeeee
Q 010075 231 YVFTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYK-EPF-PGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVI 303 (519)
Q Consensus 231 Y~~sK~~aE~lv~~~-----~~~lp~~IvRPs~V~g~~~-~p~-~gw~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~d~v 303 (519)
|+.||+..|.+++.+ ..+++++++|||.|.++.. ... +.+ ........+ .....++
T Consensus 177 Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~--------~~~~~~~~~---------~p~~~~~ 239 (302)
T 1w6u_A 177 SASAKAGVEAMSKSLAAEWGKYGMRFNVIQPGPIKTKGAFSRLDPTG--------TFEKEMIGR---------IPCGRLG 239 (302)
T ss_dssp HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCC------CCTTS--------HHHHHHHTT---------CTTSSCB
T ss_pred hHHHHHHHHHHHHHHHHHhhhcCcEEEEEeeccCCCcchhhhcccch--------hhHHHHHhc---------CCcCCCC
Confidence 999999999998865 2589999999999988622 111 100 001111111 1123478
Q ss_pred eHHHHHHHHHHHHHHhccCCCCCcEEEecCC
Q 010075 304 PVDMVVNAMIVAMVAHAKQPSDANIYHVGSS 334 (519)
Q Consensus 304 pVDdva~aii~a~~~~~~~~~~~~iyni~s~ 334 (519)
+++|+|++++.++..... ...+++|++.+|
T Consensus 240 ~~~dva~~~~~l~~~~~~-~~~G~~~~v~gg 269 (302)
T 1w6u_A 240 TVEELANLAAFLCSDYAS-WINGAVIKFDGG 269 (302)
T ss_dssp CHHHHHHHHHHHTSGGGT-TCCSCEEEESTT
T ss_pred CHHHHHHHHHHHcCCccc-ccCCCEEEECCC
Confidence 899999999988854322 123689999887
|
| >2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A* | Back alignment and structure |
|---|
Probab=99.80 E-value=1.1e-18 Score=170.77 Aligned_cols=226 Identities=15% Similarity=0.133 Sum_probs=152.7
Q ss_pred hcCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceE
Q 010075 9 FLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKIT 88 (519)
Q Consensus 9 ~~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~ 88 (519)
.++||+|+||||||+||++++++|++.| .+|+++.|+... .+++.+ .+++. ..++.
T Consensus 11 ~l~~k~vlVTGas~gIG~~ia~~l~~~G---~~V~~~~r~~~~---~~~~~~---------~l~~~---------~~~~~ 66 (260)
T 2zat_A 11 PLENKVALVTASTDGIGLAIARRLAQDG---AHVVVSSRKQEN---VDRTVA---------TLQGE---------GLSVT 66 (260)
T ss_dssp TTTTCEEEESSCSSHHHHHHHHHHHHTT---CEEEEEESCHHH---HHHHHH---------HHHHT---------TCCEE
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCC---CEEEEEeCCHHH---HHHHHH---------HHHhc---------CCceE
Confidence 3679999999999999999999999998 678999886421 111111 11111 24688
Q ss_pred EEeccCCCCCCCCChhhhHHHHh-------cCccEEEEcCccCCc--------cccHHHHHHHhHHHHHHHHHHHHhc--
Q 010075 89 FVPGDISSEDLGLKDSNLKEELW-------NELDIMVNSAAITKF--------DERYDVAFGINTLGVIHLVNFAKKC-- 151 (519)
Q Consensus 89 ~v~gDl~~~~lgls~~~~~~~l~-------~~vdiViH~Aa~v~f--------~~~~~~~~~~Nv~gt~~ll~~a~~~-- 151 (519)
.+.+|++++ ++ .+.++ .++|+|||+||.... .+.++..+++|+.|+.++++.+.+.
T Consensus 67 ~~~~D~~~~------~~-~~~~~~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~ 139 (260)
T 2zat_A 67 GTVCHVGKA------ED-RERLVAMAVNLHGGVDILVSNAAVNPFFGNIIDATEEVWDKILHVNVKATVLMTKAVVPEME 139 (260)
T ss_dssp EEECCTTCH------HH-HHHHHHHHHHHHSCCCEEEECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHH
T ss_pred EEEccCCCH------HH-HHHHHHHHHHHcCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHH
Confidence 899999953 22 22333 379999999997431 2457788999999999988887531
Q ss_pred -cCCceEEEEecceeecCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcH
Q 010075 152 -VKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNT 230 (519)
Q Consensus 152 -~~l~~~V~vSTa~v~~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~ 230 (519)
.+..++|++||...+... .....
T Consensus 140 ~~~~g~iv~isS~~~~~~~--------------------------------------------------------~~~~~ 163 (260)
T 2zat_A 140 KRGGGSVLIVSSVGAYHPF--------------------------------------------------------PNLGP 163 (260)
T ss_dssp HTTCEEEEEECCGGGTSCC--------------------------------------------------------TTBHH
T ss_pred HcCCCEEEEEechhhcCCC--------------------------------------------------------CCchh
Confidence 356899999998765321 12357
Q ss_pred HHHHHHHHHHHHHHh-----hcCCcEEEEecCccccCCCCCCCcccccccccHHHHHHhhcCCceeeccCCCceeeeeeH
Q 010075 231 YVFTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPV 305 (519)
Q Consensus 231 Y~~sK~~aE~lv~~~-----~~~lp~~IvRPs~V~g~~~~p~~gw~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~d~vpV 305 (519)
|+.||+..|.+.+.. ..++++.+++||.|.++.... .|.+ ......... ......++++
T Consensus 164 Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~--~~~~-----~~~~~~~~~---------~~~~~~~~~~ 227 (260)
T 2zat_A 164 YNVSKTALLGLTKNLAVELAPRNIRVNCLAPGLIKTNFSQV--LWMD-----KARKEYMKE---------SLRIRRLGNP 227 (260)
T ss_dssp HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSSTTHH--HHSS-----HHHHHHHHH---------HHTCSSCBCG
T ss_pred HHHHHHHHHHHHHHHHHHhcccCeEEEEEEECcccCccchh--cccC-----hHHHHHHHh---------cCCCCCCCCH
Confidence 999999999988765 347999999999998764310 0100 000000000 0112357899
Q ss_pred HHHHHHHHHHHHHhccCCCCCcEEEecCCCCCc
Q 010075 306 DMVVNAMIVAMVAHAKQPSDANIYHVGSSLRNP 338 (519)
Q Consensus 306 Ddva~aii~a~~~~~~~~~~~~iyni~s~~~~~ 338 (519)
+|+|++++.++..... .-.++++++.+|...+
T Consensus 228 ~dva~~v~~l~s~~~~-~~tG~~~~vdgG~~~s 259 (260)
T 2zat_A 228 EDCAGIVSFLCSEDAS-YITGETVVVGGGTASR 259 (260)
T ss_dssp GGGHHHHHHHTSGGGT-TCCSCEEEESTTCCCC
T ss_pred HHHHHHHHHHcCcccC-CccCCEEEECCCcccc
Confidence 9999999888754322 1236899999985543
|
| >3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis} | Back alignment and structure |
|---|
Probab=99.80 E-value=1.9e-18 Score=168.97 Aligned_cols=225 Identities=12% Similarity=0.110 Sum_probs=155.4
Q ss_pred cCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 010075 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (519)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (519)
++||+++||||+|+||++++++|++.| .+|+++.|+... .+.+.+++ ++ ...++.+
T Consensus 10 l~~k~vlVTGas~gIG~~ia~~l~~~G---~~V~~~~r~~~~---~~~~~~~~---------~~---------~~~~~~~ 65 (256)
T 3gaf_A 10 LNDAVAIVTGAAAGIGRAIAGTFAKAG---ASVVVTDLKSEG---AEAVAAAI---------RQ---------AGGKAIG 65 (256)
T ss_dssp CTTCEEEECSCSSHHHHHHHHHHHHHT---CEEEEEESSHHH---HHHHHHHH---------HH---------TTCCEEE
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCC---CEEEEEeCCHHH---HHHHHHHH---------Hh---------cCCcEEE
Confidence 679999999999999999999999999 678888886422 22222111 11 1257899
Q ss_pred EeccCCCCCCCCChhhhHHHHh-------cCccEEEEcCccCCc------cccHHHHHHHhHHHHHHHHHHHHhc---cC
Q 010075 90 VPGDISSEDLGLKDSNLKEELW-------NELDIMVNSAAITKF------DERYDVAFGINTLGVIHLVNFAKKC---VK 153 (519)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~-------~~vdiViH~Aa~v~f------~~~~~~~~~~Nv~gt~~ll~~a~~~---~~ 153 (519)
+.+|++++ +..+.++ .++|++||+||.... .+.++..+++|+.|+.++++.+... .+
T Consensus 66 ~~~Dv~d~-------~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~ 138 (256)
T 3gaf_A 66 LECNVTDE-------QHREAVIKAALDQFGKITVLVNNAGGGGPKPFDMPMSDFEWAFKLNLFSLFRLSQLAAPHMQKAG 138 (256)
T ss_dssp EECCTTCH-------HHHHHHHHHHHHHHSCCCEEEECCCCCCCCCTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT
T ss_pred EECCCCCH-------HHHHHHHHHHHHHcCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC
Confidence 99999963 2223333 379999999997542 2567788999999999999987432 24
Q ss_pred CceEEEEecceeecCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcHHHH
Q 010075 154 LKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVF 233 (519)
Q Consensus 154 l~~~V~vSTa~v~~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~Y~~ 233 (519)
..++|++||...+... .....|+.
T Consensus 139 ~g~iv~isS~~~~~~~--------------------------------------------------------~~~~~Y~a 162 (256)
T 3gaf_A 139 GGAILNISSMAGENTN--------------------------------------------------------VRMASYGS 162 (256)
T ss_dssp CEEEEEECCGGGTCCC--------------------------------------------------------TTCHHHHH
T ss_pred CcEEEEEcCHHHcCCC--------------------------------------------------------CCchHHHH
Confidence 5799999998654211 22457999
Q ss_pred HHHHHHHHHHHh-----hcCCcEEEEecCccccCCCCCCCcccccccccHHHHHHhhcCCceeeccCCCceeeeeeHHHH
Q 010075 234 TKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMV 308 (519)
Q Consensus 234 sK~~aE~lv~~~-----~~~lp~~IvRPs~V~g~~~~p~~gw~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~d~vpVDdv 308 (519)
||+..+.+.+.. ..++.+..++||.|.++..... ............ .....+..++|+
T Consensus 163 sKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~--------~~~~~~~~~~~~---------~p~~r~~~~~dv 225 (256)
T 3gaf_A 163 SKAAVNHLTRNIAFDVGPMGIRVNAIAPGAIKTDALATV--------LTPEIERAMLKH---------TPLGRLGEAQDI 225 (256)
T ss_dssp HHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCHHHHHH--------CCHHHHHHHHTT---------CTTSSCBCHHHH
T ss_pred HHHHHHHHHHHHHHHHhhhCcEEEEEEEccccCchhhhc--------cCHHHHHHHHhc---------CCCCCCCCHHHH
Confidence 999999988765 3579999999999877532110 011112222111 123457889999
Q ss_pred HHHHHHHHHHhccCCCCCcEEEecCCCCCch
Q 010075 309 VNAMIVAMVAHAKQPSDANIYHVGSSLRNPV 339 (519)
Q Consensus 309 a~aii~a~~~~~~~~~~~~iyni~s~~~~~i 339 (519)
|++++.++.... ..-.++++++.+|...++
T Consensus 226 a~~~~~L~s~~~-~~itG~~i~vdgG~~~~~ 255 (256)
T 3gaf_A 226 ANAALFLCSPAA-AWISGQVLTVSGGGVQEL 255 (256)
T ss_dssp HHHHHHHHSGGG-TTCCSCEEEESTTSCCC-
T ss_pred HHHHHHHcCCcc-cCccCCEEEECCCccccC
Confidence 999999886432 222478999999866543
|
| >2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus} | Back alignment and structure |
|---|
Probab=99.80 E-value=3.5e-18 Score=165.83 Aligned_cols=220 Identities=13% Similarity=0.096 Sum_probs=149.0
Q ss_pred CCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEEe
Q 010075 12 NKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVP 91 (519)
Q Consensus 12 ~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v~ 91 (519)
+|+|+||||||+||++++++|++.| .+|+++.|+... .+++.+++ .+. ...++.++.
T Consensus 2 ~k~vlItGasggiG~~~a~~l~~~G---~~V~~~~r~~~~---~~~~~~~~---------~~~--------~~~~~~~~~ 58 (250)
T 2cfc_A 2 SRVAIVTGASSGNGLAIATRFLARG---DRVAALDLSAET---LEETARTH---------WHA--------YADKVLRVR 58 (250)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTT---CEEEEEESCHHH---HHHHHHHH---------STT--------TGGGEEEEE
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCC---CEEEEEeCCHHH---HHHHHHHH---------HHh--------cCCcEEEEE
Confidence 6899999999999999999999998 678999886421 12221111 000 125688999
Q ss_pred ccCCCCCCCCChhhhHHHHhc-------CccEEEEcCccCCc----------cccHHHHHHHhHHHHHHHHHHHHhc---
Q 010075 92 GDISSEDLGLKDSNLKEELWN-------ELDIMVNSAAITKF----------DERYDVAFGINTLGVIHLVNFAKKC--- 151 (519)
Q Consensus 92 gDl~~~~lgls~~~~~~~l~~-------~vdiViH~Aa~v~f----------~~~~~~~~~~Nv~gt~~ll~~a~~~--- 151 (519)
+|++++ +..+.+++ ++|+|||+||.... .+.++..+++|+.|+.++++.+.+.
T Consensus 59 ~D~~~~-------~~~~~~~~~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~ 131 (250)
T 2cfc_A 59 ADVADE-------GDVNAAIAATMEQFGAIDVLVNNAGITGNSEAGVLHTTPVEQFDKVMAVNVRGIFLGCRAVLPHMLL 131 (250)
T ss_dssp CCTTCH-------HHHHHHHHHHHHHHSCCCEEEECCCCCCCTTCCSGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHH
T ss_pred ecCCCH-------HHHHHHHHHHHHHhCCCCEEEECCCCCCCCCcchhhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHh
Confidence 999953 32334433 79999999997532 2457788999999998777665431
Q ss_pred cCCceEEEEecceeecCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcHH
Q 010075 152 VKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTY 231 (519)
Q Consensus 152 ~~l~~~V~vSTa~v~~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~Y 231 (519)
.+.+++|++||...+... .....|
T Consensus 132 ~~~~~iv~isS~~~~~~~--------------------------------------------------------~~~~~Y 155 (250)
T 2cfc_A 132 QGAGVIVNIASVASLVAF--------------------------------------------------------PGRSAY 155 (250)
T ss_dssp HTCEEEEEECCGGGTSCC--------------------------------------------------------TTCHHH
T ss_pred CCCCEEEEECChhhccCC--------------------------------------------------------CCchhH
Confidence 256899999998654321 124579
Q ss_pred HHHHHHHHHHHHHh-----hcCCcEEEEecCccccCCCCCCCcccccccccHHHHHHhhcCCceeeccCCCceeeeeeHH
Q 010075 232 VFTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVD 306 (519)
Q Consensus 232 ~~sK~~aE~lv~~~-----~~~lp~~IvRPs~V~g~~~~p~~gw~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~d~vpVD 306 (519)
+.||+..|.+++.+ ..+++++++||+.|+++..... .. ...+......+ .....+.+.+
T Consensus 156 ~~sK~a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~---~~----~~~~~~~~~~~---------~~~~~~~~~~ 219 (250)
T 2cfc_A 156 TTSKGAVLQLTKSVAVDYAGSGIRCNAVCPGMIETPMTQWR---LD----QPELRDQVLAR---------IPQKEIGTAA 219 (250)
T ss_dssp HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSTTTHHH---HT----SHHHHHHHHTT---------CTTCSCBCHH
T ss_pred HHHHHHHHHHHHHHHHHhcccCeEEEEEEeCcCccCccccc---cC----CHHHHHHHHhc---------CCCCCCcCHH
Confidence 99999999998765 3489999999999998754210 00 01122222111 1123468999
Q ss_pred HHHHHHHHHHHHhccCCCCCcEEEecCC
Q 010075 307 MVVNAMIVAMVAHAKQPSDANIYHVGSS 334 (519)
Q Consensus 307 dva~aii~a~~~~~~~~~~~~iyni~s~ 334 (519)
|+|++++.++.... ..-.++++++.+|
T Consensus 220 dva~~~~~l~~~~~-~~~~G~~~~v~gG 246 (250)
T 2cfc_A 220 QVADAVMFLAGEDA-TYVNGAALVMDGA 246 (250)
T ss_dssp HHHHHHHHHHSTTC-TTCCSCEEEESTT
T ss_pred HHHHHHHHHcCchh-hcccCCEEEECCc
Confidence 99999998885332 1223689999877
|
| >3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.80 E-value=2.3e-18 Score=167.08 Aligned_cols=220 Identities=15% Similarity=0.148 Sum_probs=152.8
Q ss_pred cCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 010075 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (519)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (519)
+++|+|+||||+|+||++++++|++.| .+|+++.|+... .+.+.++ +++. ..++.+
T Consensus 3 l~~k~vlITGas~gIG~~~a~~l~~~G---~~v~~~~r~~~~---~~~~~~~---------~~~~---------~~~~~~ 58 (247)
T 3lyl_A 3 LNEKVALVTGASRGIGFEVAHALASKG---ATVVGTATSQAS---AEKFENS---------MKEK---------GFKARG 58 (247)
T ss_dssp TTTCEEEESSCSSHHHHHHHHHHHHTT---CEEEEEESSHHH---HHHHHHH---------HHHT---------TCCEEE
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHCC---CEEEEEeCCHHH---HHHHHHH---------HHhc---------CCceEE
Confidence 468999999999999999999999998 678898886432 1222211 1111 257899
Q ss_pred EeccCCCCCCCCChhhhHHHHh-------cCccEEEEcCccCCc-------cccHHHHHHHhHHHHHHHHHHHHhc---c
Q 010075 90 VPGDISSEDLGLKDSNLKEELW-------NELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKC---V 152 (519)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~-------~~vdiViH~Aa~v~f-------~~~~~~~~~~Nv~gt~~ll~~a~~~---~ 152 (519)
+.+|++++ +..+.++ .++|+|||+||.... .+.++..+++|+.|+.++++.+.+. .
T Consensus 59 ~~~D~~~~-------~~~~~~~~~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~ 131 (247)
T 3lyl_A 59 LVLNISDI-------ESIQNFFAEIKAENLAIDILVNNAGITRDNLMMRMSEDEWQSVINTNLSSIFRMSKECVRGMMKK 131 (247)
T ss_dssp EECCTTCH-------HHHHHHHHHHHHTTCCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH
T ss_pred EEecCCCH-------HHHHHHHHHHHHHcCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc
Confidence 99999963 2223333 258999999998642 2567788999999999998887542 2
Q ss_pred CCceEEEEecceeecCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcHHH
Q 010075 153 KLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYV 232 (519)
Q Consensus 153 ~l~~~V~vSTa~v~~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~Y~ 232 (519)
+..++|++||....... +....|+
T Consensus 132 ~~g~iv~isS~~~~~~~--------------------------------------------------------~~~~~Y~ 155 (247)
T 3lyl_A 132 RWGRIISIGSVVGSAGN--------------------------------------------------------PGQTNYC 155 (247)
T ss_dssp TCEEEEEECCTHHHHCC--------------------------------------------------------TTCHHHH
T ss_pred CCeEEEEEcchhhccCC--------------------------------------------------------CCcHHHH
Confidence 45689999997654321 2245799
Q ss_pred HHHHHHHHHHHHh-----hcCCcEEEEecCccccCCCCCCCcccccccccHHHHHHhhcCCceeeccCCCceeeeeeHHH
Q 010075 233 FTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDM 307 (519)
Q Consensus 233 ~sK~~aE~lv~~~-----~~~lp~~IvRPs~V~g~~~~p~~gw~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~d~vpVDd 307 (519)
.||+..+.+++.. ..++++..++||.|.++.....+. ....... .......+.+++|
T Consensus 156 ~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~---------~~~~~~~---------~~~~~~~~~~~~d 217 (247)
T 3lyl_A 156 AAKAGVIGFSKSLAYEVASRNITVNVVAPGFIATDMTDKLTD---------EQKSFIA---------TKIPSGQIGEPKD 217 (247)
T ss_dssp HHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTTTTSCH---------HHHHHHH---------TTSTTCCCBCHHH
T ss_pred HHHHHHHHHHHHHHHHHHHcCeEEEEEeeCcEecccchhccH---------HHHHHHh---------hcCCCCCCcCHHH
Confidence 9999888777654 457999999999998765432211 1111111 1223346789999
Q ss_pred HHHHHHHHHHHhccCCCCCcEEEecCCC
Q 010075 308 VVNAMIVAMVAHAKQPSDANIYHVGSSL 335 (519)
Q Consensus 308 va~aii~a~~~~~~~~~~~~iyni~s~~ 335 (519)
+|++++.++..... .-.++++++.+|.
T Consensus 218 va~~i~~l~s~~~~-~~tG~~i~vdgG~ 244 (247)
T 3lyl_A 218 IAAAVAFLASEEAK-YITGQTLHVNGGM 244 (247)
T ss_dssp HHHHHHHHHSGGGT-TCCSCEEEESTTS
T ss_pred HHHHHHHHhCCCcC-CccCCEEEECCCE
Confidence 99999988864332 2247899998874
|
| >3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.80 E-value=1.1e-17 Score=165.03 Aligned_cols=220 Identities=17% Similarity=0.134 Sum_probs=154.5
Q ss_pred hhhcCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCc
Q 010075 7 VEFLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEK 86 (519)
Q Consensus 7 ~~~~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~ 86 (519)
..-++||+++||||+|+||++++++|++.| .+|+++.|+.... +.+.++ . ..+
T Consensus 6 ~~~l~~k~vlVTGas~gIG~aia~~l~~~G---~~V~~~~r~~~~~---~~~~~~-------------~--------~~~ 58 (271)
T 3tzq_B 6 TAELENKVAIITGACGGIGLETSRVLARAG---ARVVLADLPETDL---AGAAAS-------------V--------GRG 58 (271)
T ss_dssp -CTTTTCEEEEETTTSHHHHHHHHHHHHTT---CEEEEEECTTSCH---HHHHHH-------------H--------CTT
T ss_pred CcCCCCCEEEEECCCcHHHHHHHHHHHHCC---CEEEEEcCCHHHH---HHHHHH-------------h--------CCC
Confidence 345789999999999999999999999998 6789999876432 111111 1 256
Q ss_pred eEEEeccCCCCCCCCChhhhHHHHhc-------CccEEEEcCccCCc---------cccHHHHHHHhHHHHHHHHHHHHh
Q 010075 87 ITFVPGDISSEDLGLKDSNLKEELWN-------ELDIMVNSAAITKF---------DERYDVAFGINTLGVIHLVNFAKK 150 (519)
Q Consensus 87 v~~v~gDl~~~~lgls~~~~~~~l~~-------~vdiViH~Aa~v~f---------~~~~~~~~~~Nv~gt~~ll~~a~~ 150 (519)
+.++.+|++++ +..+.+++ ++|++||+||.... .+.++..+++|+.|+.++++.+..
T Consensus 59 ~~~~~~Dv~~~-------~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~ 131 (271)
T 3tzq_B 59 AVHHVVDLTNE-------VSVRALIDFTIDTFGRLDIVDNNAAHSDPADMLVTQMTVDVWDDTFTVNARGTMLMCKYAIP 131 (271)
T ss_dssp CEEEECCTTCH-------HHHHHHHHHHHHHHSCCCEEEECCCCCCTTCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred eEEEECCCCCH-------HHHHHHHHHHHHHcCCCCEEEECCCCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHH
Confidence 78999999953 32334443 79999999997622 245778899999999999998832
Q ss_pred c---cCCceEEEEecceeecCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCC
Q 010075 151 C---VKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGW 227 (519)
Q Consensus 151 ~---~~l~~~V~vSTa~v~~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~ 227 (519)
. .+..++|++||...+... ..
T Consensus 132 ~m~~~~~g~iv~isS~~~~~~~--------------------------------------------------------~~ 155 (271)
T 3tzq_B 132 RLISAGGGAIVNISSATAHAAY--------------------------------------------------------DM 155 (271)
T ss_dssp HHHHTTCEEEEEECCGGGTSBC--------------------------------------------------------SS
T ss_pred HHHhcCCCEEEEECCHHHcCCC--------------------------------------------------------CC
Confidence 1 356799999998654321 22
Q ss_pred CcHHHHHHHHHHHHHHHh-----hcCCcEEEEecCccccCCCCCCCcccccccccHHHHHHhhcCCceeeccCCCceeee
Q 010075 228 PNTYVFTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDV 302 (519)
Q Consensus 228 ~n~Y~~sK~~aE~lv~~~-----~~~lp~~IvRPs~V~g~~~~p~~gw~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~d~ 302 (519)
...|+.||+..+.+.+.. ..++++..++||.|.++.... . ............. ....+
T Consensus 156 ~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~--~------~~~~~~~~~~~~~---------~~~r~ 218 (271)
T 3tzq_B 156 STAYACTKAAIETLTRYVATQYGRHGVRCNAIAPGLVRTPRLEV--G------LPQPIVDIFATHH---------LAGRI 218 (271)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCTTTC-----------CHHHHHHHHTTS---------TTSSC
T ss_pred ChHHHHHHHHHHHHHHHHHHHHhhcCEEEEEEEeCCCcCccccc--c------CCHHHHHHHHhcC---------CCCCC
Confidence 457999999999988765 357999999999999875421 0 0112222222211 11235
Q ss_pred eeHHHHHHHHHHHHHHhccCCCCCcEEEecCC
Q 010075 303 IPVDMVVNAMIVAMVAHAKQPSDANIYHVGSS 334 (519)
Q Consensus 303 vpVDdva~aii~a~~~~~~~~~~~~iyni~s~ 334 (519)
...+|+|++++.++..... .-.++++++.+|
T Consensus 219 ~~p~dvA~~v~~L~s~~~~-~itG~~i~vdGG 249 (271)
T 3tzq_B 219 GEPHEIAELVCFLASDRAA-FITGQVIAADSG 249 (271)
T ss_dssp BCHHHHHHHHHHHHSGGGT-TCCSCEEEESTT
T ss_pred cCHHHHHHHHHHHhCcccC-CcCCCEEEECCC
Confidence 7789999999998864332 224789999888
|
| >2wyu_A Enoyl-[acyl carrier protein] reductase; oxidoreductase, fatty acid biosynthesis, oxidation reduction; 1.50A {Thermus thermophilus} PDB: 1ulu_A 2wyv_A* 2wyw_A* 2yw9_A* | Back alignment and structure |
|---|
Probab=99.80 E-value=3.5e-18 Score=167.54 Aligned_cols=222 Identities=16% Similarity=0.147 Sum_probs=151.3
Q ss_pred hcCCCEEEEeCCc--cHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCc
Q 010075 9 FLENKTILVSGVT--GFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEK 86 (519)
Q Consensus 9 ~~~~k~VlITGaT--GFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~ 86 (519)
.+++|+|+||||+ |+||++++++|++.| .+|+++.|+.......+++. ++. .+
T Consensus 5 ~l~~k~vlVTGas~~~gIG~~ia~~l~~~G---~~V~~~~r~~~~~~~~~~l~-------------~~~---------~~ 59 (261)
T 2wyu_A 5 DLSGKKALVMGVTNQRSLGFAIAAKLKEAG---AEVALSYQAERLRPEAEKLA-------------EAL---------GG 59 (261)
T ss_dssp CCTTCEEEEESCCSSSSHHHHHHHHHHHHT---CEEEEEESCGGGHHHHHHHH-------------HHT---------TC
T ss_pred CCCCCEEEEECCCCCCcHHHHHHHHHHHCC---CEEEEEcCCHHHHHHHHHHH-------------Hhc---------CC
Confidence 3678999999999 999999999999998 67899998753211222221 111 23
Q ss_pred eEEEeccCCCCCCCCChhhhHHHHh-------cCccEEEEcCccCCc-----------cccHHHHHHHhHHHHHHHHHHH
Q 010075 87 ITFVPGDISSEDLGLKDSNLKEELW-------NELDIMVNSAAITKF-----------DERYDVAFGINTLGVIHLVNFA 148 (519)
Q Consensus 87 v~~v~gDl~~~~lgls~~~~~~~l~-------~~vdiViH~Aa~v~f-----------~~~~~~~~~~Nv~gt~~ll~~a 148 (519)
+.++.+|++++ +..+.++ .++|+|||+||.... .+.++..+++|+.|+.++++.+
T Consensus 60 ~~~~~~D~~~~-------~~v~~~~~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~ 132 (261)
T 2wyu_A 60 ALLFRADVTQD-------EELDALFAGVKEAFGGLDYLVHAIAFAPREAMEGRYIDTRRQDWLLALEVSAYSLVAVARRA 132 (261)
T ss_dssp CEEEECCTTCH-------HHHHHHHHHHHHHHSSEEEEEECCCCCCHHHHSSCGGGCCHHHHHHHHHHHTHHHHHHHHHH
T ss_pred cEEEECCCCCH-------HHHHHHHHHHHHHcCCCCEEEECCCCCCcccCCCCcccCCHHHHHHHHHHhhHHHHHHHHHH
Confidence 68899999963 2223333 379999999997532 2457788999999999999998
Q ss_pred Hhc-cCCceEEEEecceeecCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCC
Q 010075 149 KKC-VKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGW 227 (519)
Q Consensus 149 ~~~-~~l~~~V~vSTa~v~~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~ 227 (519)
.+. .+-.++|++||...+... ..
T Consensus 133 ~~~~~~~g~iv~isS~~~~~~~--------------------------------------------------------~~ 156 (261)
T 2wyu_A 133 EPLLREGGGIVTLTYYASEKVV--------------------------------------------------------PK 156 (261)
T ss_dssp TTTEEEEEEEEEEECGGGTSBC--------------------------------------------------------TT
T ss_pred HHHhccCCEEEEEecccccCCC--------------------------------------------------------CC
Confidence 763 112589999997543211 12
Q ss_pred CcHHHHHHHHHHHHHHHh-----hcCCcEEEEecCccccCCCCCCCcccccccccHHHHHHhhcCCceeeccCCCceeee
Q 010075 228 PNTYVFTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDV 302 (519)
Q Consensus 228 ~n~Y~~sK~~aE~lv~~~-----~~~lp~~IvRPs~V~g~~~~p~~gw~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~d~ 302 (519)
...|+.||+..|.+.+.+ ..++++.+++||.|.++.....+. ..........+. ....+
T Consensus 157 ~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~-------~~~~~~~~~~~~---------p~~~~ 220 (261)
T 2wyu_A 157 YNVMAIAKAALEASVRYLAYELGPKGVRVNAISAGPVRTVAARSIPG-------FTKMYDRVAQTA---------PLRRN 220 (261)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCCCCTGGGGCTT-------HHHHHHHHHHHS---------TTSSC
T ss_pred chHHHHHHHHHHHHHHHHHHHHhhhCcEEEEEeeCCCcCchhhhccc-------cHHHHHHHHhcC---------CCCCC
Confidence 357999999999988765 348999999999998875422111 111111111111 11235
Q ss_pred eeHHHHHHHHHHHHHHhccCCCCCcEEEecCCC
Q 010075 303 IPVDMVVNAMIVAMVAHAKQPSDANIYHVGSSL 335 (519)
Q Consensus 303 vpVDdva~aii~a~~~~~~~~~~~~iyni~s~~ 335 (519)
.+++|+|++++.++.... ..-.+++|++.+|.
T Consensus 221 ~~~~dva~~v~~l~s~~~-~~~tG~~~~vdgG~ 252 (261)
T 2wyu_A 221 ITQEEVGNLGLFLLSPLA-SGITGEVVYVDAGY 252 (261)
T ss_dssp CCHHHHHHHHHHHHSGGG-TTCCSCEEEESTTG
T ss_pred CCHHHHHHHHHHHcChhh-cCCCCCEEEECCCc
Confidence 789999999999886432 22236899998873
|
| >3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.80 E-value=4.8e-18 Score=166.11 Aligned_cols=216 Identities=12% Similarity=0.137 Sum_probs=146.7
Q ss_pred cCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 010075 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (519)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (519)
++||+++||||+|+||++++++|++.| .+|+++.|+...... ..++ ...++.+
T Consensus 5 l~~k~~lVTGas~gIG~aia~~l~~~G---~~V~~~~r~~~~~~~---~~~~---------------------~~~~~~~ 57 (257)
T 3tpc_A 5 LKSRVFIVTGASSGLGAAVTRMLAQEG---ATVLGLDLKPPAGEE---PAAE---------------------LGAAVRF 57 (257)
T ss_dssp CTTCEEEEESTTSHHHHHHHHHHHHTT---CEEEEEESSCC------------------------------------CEE
T ss_pred cCCCEEEEeCCCCHHHHHHHHHHHHCC---CEEEEEeCChHHHHH---HHHH---------------------hCCceEE
Confidence 578999999999999999999999998 678999988654311 1100 1256889
Q ss_pred EeccCCCCCCCCChhhhHHHHh-------cCccEEEEcCccCCc-----------cccHHHHHHHhHHHHHHHHHHHHhc
Q 010075 90 VPGDISSEDLGLKDSNLKEELW-------NELDIMVNSAAITKF-----------DERYDVAFGINTLGVIHLVNFAKKC 151 (519)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~-------~~vdiViH~Aa~v~f-----------~~~~~~~~~~Nv~gt~~ll~~a~~~ 151 (519)
+.+|++++ +..+.++ .++|++||+||.... .+.++..+++|+.|+..+++++.+.
T Consensus 58 ~~~Dv~~~-------~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~ 130 (257)
T 3tpc_A 58 RNADVTNE-------ADATAALAFAKQEFGHVHGLVNCAGTAPGEKILGRSGPHALDSFARTVAVNLIGTFNMIRLAAEV 130 (257)
T ss_dssp EECCTTCH-------HHHHHHHHHHHHHHSCCCEEEECCCCCCCCCSEETTEECCHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred EEccCCCH-------HHHHHHHHHHHHHcCCCCEEEECCCCCCCCccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence 99999953 3233443 379999999997632 2567888999999999999988653
Q ss_pred ---------cCCceEEEEecceeecCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhcccccc
Q 010075 152 ---------VKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERA 222 (519)
Q Consensus 152 ---------~~l~~~V~vSTa~v~~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~ 222 (519)
++..++|++||...+...
T Consensus 131 m~~~~~~~~~~~g~iv~isS~~~~~~~----------------------------------------------------- 157 (257)
T 3tpc_A 131 MSQGEPDADGERGVIVNTASIAAFDGQ----------------------------------------------------- 157 (257)
T ss_dssp HTTSCCCTTSCCEEEEEECCTHHHHCC-----------------------------------------------------
T ss_pred HHhccccCCCCCeEEEEEechhhccCC-----------------------------------------------------
Confidence 134679999998654321
Q ss_pred ccCCCCcHHHHHHHHHHHHHHHh-----hcCCcEEEEecCccccCCCCCCCcccccccccHHHHHHhhcCCceeeccCCC
Q 010075 223 KLHGWPNTYVFTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETK 297 (519)
Q Consensus 223 ~~~~~~n~Y~~sK~~aE~lv~~~-----~~~lp~~IvRPs~V~g~~~~p~~gw~~~~~~~~~~i~~~~~g~~~~~~~~~~ 297 (519)
.....|+.||+..+.+.+.. ..++++..++||.|.++.....+. ....... ...
T Consensus 158 ---~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~---------~~~~~~~---------~~~ 216 (257)
T 3tpc_A 158 ---IGQAAYAASKGGVAALTLPAARELARFGIRVVTIAPGIFDTPMMAGMPQ---------DVQDALA---------ASV 216 (257)
T ss_dssp ---TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBSCC--------------------------------CCS
T ss_pred ---CCCcchHHHHHHHHHHHHHHHHHHHHcCeEEEEEEeCCCCChhhccCCH---------HHHHHHH---------hcC
Confidence 22457999999999887654 358999999999998865422111 0011111 111
Q ss_pred ce-eeeeeHHHHHHHHHHHHHHhccCCCCCcEEEecCCCC
Q 010075 298 VI-MDVIPVDMVVNAMIVAMVAHAKQPSDANIYHVGSSLR 336 (519)
Q Consensus 298 ~~-~d~vpVDdva~aii~a~~~~~~~~~~~~iyni~s~~~ 336 (519)
.. ..+..++|+|++++.++.. ..-.++++++.+|..
T Consensus 217 p~~~r~~~~~dva~~v~~l~s~---~~itG~~i~vdGG~~ 253 (257)
T 3tpc_A 217 PFPPRLGRAEEYAALVKHICEN---TMLNGEVIRLDGALR 253 (257)
T ss_dssp SSSCSCBCHHHHHHHHHHHHHC---TTCCSCEEEESTTCC
T ss_pred CCCCCCCCHHHHHHHHHHHccc---CCcCCcEEEECCCcc
Confidence 11 3467899999999998863 122478999988854
|
| >1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.79 E-value=4.3e-18 Score=168.28 Aligned_cols=233 Identities=15% Similarity=0.120 Sum_probs=148.8
Q ss_pred cCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 010075 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (519)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (519)
+++|+|+||||||+||+++++.|++.| .+|+++.|+... .+.+.++ +.+... ...++.+
T Consensus 4 ~~~k~vlVTGas~gIG~~ia~~l~~~G---~~V~~~~r~~~~---~~~~~~~---------~~~~~~------~~~~~~~ 62 (278)
T 1spx_A 4 FAEKVAIITGSSNGIGRATAVLFAREG---AKVTITGRHAER---LEETRQQ---------ILAAGV------SEQNVNS 62 (278)
T ss_dssp TTTCEEEETTTTSHHHHHHHHHHHHTT---CEEEEEESCHHH---HHHHHHH---------HHHTTC------CGGGEEE
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCC---CEEEEEeCCHHH---HHHHHHH---------HHhccc------CCCceeE
Confidence 578999999999999999999999998 678999886421 1222111 110000 1246889
Q ss_pred EeccCCCCCCCCChhhhHHHHhc-------CccEEEEcCccCC-----------ccccHHHHHHHhHHHHHHHHHHHHhc
Q 010075 90 VPGDISSEDLGLKDSNLKEELWN-------ELDIMVNSAAITK-----------FDERYDVAFGINTLGVIHLVNFAKKC 151 (519)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~~-------~vdiViH~Aa~v~-----------f~~~~~~~~~~Nv~gt~~ll~~a~~~ 151 (519)
+.+|+++ .+..+.+++ ++|+|||+||... ..+.++..+++|+.|+.++++.+.+.
T Consensus 63 ~~~D~~~-------~~~~~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~ 135 (278)
T 1spx_A 63 VVADVTT-------DAGQDEILSTTLGKFGKLDILVNNAGAAIPDSQSKTGTAQSIESYDATLNLNLRSVIALTKKAVPH 135 (278)
T ss_dssp EECCTTS-------HHHHHHHHHHHHHHHSCCCEEEECCC-------------CCHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred EecccCC-------HHHHHHHHHHHHHHcCCCCEEEECCCCCCCcccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence 9999995 333334443 8999999999753 22456778999999999999887653
Q ss_pred ---cCCceEEEEeccee-ecCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCC
Q 010075 152 ---VKLKVFVHVSTAYV-AGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGW 227 (519)
Q Consensus 152 ---~~l~~~V~vSTa~v-~~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~ 227 (519)
.+ .++|++||... +... ..
T Consensus 136 ~~~~~-g~iv~isS~~~~~~~~--------------------------------------------------------~~ 158 (278)
T 1spx_A 136 LSSTK-GEIVNISSIASGLHAT--------------------------------------------------------PD 158 (278)
T ss_dssp HHHHT-CEEEEECCTTSSSSCC--------------------------------------------------------TT
T ss_pred HhhcC-CeEEEEecccccccCC--------------------------------------------------------CC
Confidence 24 79999999865 3211 12
Q ss_pred CcHHHHHHHHHHHHHHHh-----hcCCcEEEEecCccccCCCCCCCcccccccccHHHHHHhhcCCceeeccCCCceeee
Q 010075 228 PNTYVFTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDV 302 (519)
Q Consensus 228 ~n~Y~~sK~~aE~lv~~~-----~~~lp~~IvRPs~V~g~~~~p~~gw~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~d~ 302 (519)
...|+.||+..|.+.+.. ..++++++++||.|.++.......-................. .+ ...+
T Consensus 159 ~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~----~p-----~~~~ 229 (278)
T 1spx_A 159 FPYYSIAKAAIDQYTRNTAIDLIQHGIRVNSISPGLVATGFGSAMGMPEETSKKFYSTMATMKEC----VP-----AGVM 229 (278)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCCCC--------------HHHHHHHHHH----CT-----TSSC
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHhcCcEEEEEecCcccCccccccccCchhhhhhhHHHHHHHhc----CC-----CcCC
Confidence 357999999999988765 358999999999998875321100000000000001111110 01 1247
Q ss_pred eeHHHHHHHHHHHHHHhccCCCCCcEEEecCCCC
Q 010075 303 IPVDMVVNAMIVAMVAHAKQPSDANIYHVGSSLR 336 (519)
Q Consensus 303 vpVDdva~aii~a~~~~~~~~~~~~iyni~s~~~ 336 (519)
++++|+|++++.++.......-.+++|++.+|..
T Consensus 230 ~~~~dvA~~v~~l~s~~~~~~~tG~~~~vdgG~~ 263 (278)
T 1spx_A 230 GQPQDIAEVIAFLADRKTSSYIIGHQLVVDGGSS 263 (278)
T ss_dssp BCHHHHHHHHHHHHCHHHHTTCCSCEEEESTTGG
T ss_pred CCHHHHHHHHHHHcCccccCcccCcEEEECCCcc
Confidence 8999999999988864332101368999988844
|
| >3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.79 E-value=1.1e-17 Score=165.79 Aligned_cols=232 Identities=14% Similarity=0.108 Sum_probs=153.7
Q ss_pred hhcCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCC----------cccHHHHHHHHHhhhhhHHHHHhhhcc
Q 010075 8 EFLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAAD----------IDSAALRFQNEVLAKDVFNVLKEKWGT 77 (519)
Q Consensus 8 ~~~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~----------~~~~~~rl~~~~~~~~~f~~l~~~~~~ 77 (519)
.-++||+++||||+|+||++++++|++.| .+|+++.|... .....+++.++ +++
T Consensus 11 ~~l~gk~~lVTGas~gIG~a~a~~la~~G---~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~---------~~~---- 74 (280)
T 3pgx_A 11 GSLQGRVAFITGAARGQGRSHAVRLAAEG---ADIIACDICAPVSASVTYAPASPEDLDETARL---------VED---- 74 (280)
T ss_dssp CTTTTCEEEEESTTSHHHHHHHHHHHHTT---CEEEEEECCSCCCTTCCSCCCCHHHHHHHHHH---------HHT----
T ss_pred cccCCCEEEEECCCcHHHHHHHHHHHHCC---CEEEEEeccccccccccccccCHHHHHHHHHH---------HHh----
Confidence 34789999999999999999999999999 68889888431 11222222211 111
Q ss_pred ccccccCCceEEEeccCCCCCCCCChhhhHHHHh-------cCccEEEEcCccCCc-------cccHHHHHHHhHHHHHH
Q 010075 78 RLNSFISEKITFVPGDISSEDLGLKDSNLKEELW-------NELDIMVNSAAITKF-------DERYDVAFGINTLGVIH 143 (519)
Q Consensus 78 ~~~~~~~~~v~~v~gDl~~~~lgls~~~~~~~l~-------~~vdiViH~Aa~v~f-------~~~~~~~~~~Nv~gt~~ 143 (519)
...++.++.+|++++ +..+.++ .++|++||+||.... .+.++..+++|+.|+.+
T Consensus 75 -----~~~~~~~~~~Dv~~~-------~~v~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~ 142 (280)
T 3pgx_A 75 -----QGRKALTRVLDVRDD-------AALRELVADGMEQFGRLDVVVANAGVLSWGRVWELTDEQWDTVIGVNLTGTWR 142 (280)
T ss_dssp -----TTCCEEEEECCTTCH-------HHHHHHHHHHHHHHCCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHH
T ss_pred -----cCCeEEEEEcCCCCH-------HHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhhhHHHHH
Confidence 135788999999963 3233333 379999999998643 25677889999999999
Q ss_pred HHHHHHhc----cCCceEEEEecceeecCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccc
Q 010075 144 LVNFAKKC----VKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGT 219 (519)
Q Consensus 144 ll~~a~~~----~~l~~~V~vSTa~v~~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~ 219 (519)
+++.+... +.-.++|++||...+...
T Consensus 143 ~~~~~~~~~~~~~~~g~iv~isS~~~~~~~-------------------------------------------------- 172 (280)
T 3pgx_A 143 TLRATVPAMIEAGNGGSIVVVSSSAGLKAT-------------------------------------------------- 172 (280)
T ss_dssp HHHHHHHHHHHHCSCEEEEEECCGGGTSCC--------------------------------------------------
T ss_pred HHHHHHHHHHhcCCCCEEEEEcchhhccCC--------------------------------------------------
Confidence 99887432 225689999997654211
Q ss_pred cccccCCCCcHHHHHHHHHHHHHHHh-----hcCCcEEEEecCccccCCCCCCCcccccccccHHHHHHhhcCCceee-c
Q 010075 220 ERAKLHGWPNTYVFTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCL-V 293 (519)
Q Consensus 220 ~~~~~~~~~n~Y~~sK~~aE~lv~~~-----~~~lp~~IvRPs~V~g~~~~p~~gw~~~~~~~~~~i~~~~~g~~~~~-~ 293 (519)
.....|+.||+..+.+.+.. ..++++..++||.|.++...+. .....+..... ....+ .
T Consensus 173 ------~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~--------~~~~~~~~~~~-~~~~~~~ 237 (280)
T 3pgx_A 173 ------PGNGHYSASKHGLTALTNTLAIELGEYGIRVNSIHPYSVETPMIEPE--------AMMEIFARHPS-FVHSFPP 237 (280)
T ss_dssp ------TTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSTTCCHH--------HHHHHHHHCGG-GGGGSCC
T ss_pred ------CCchhHHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcccCcccchh--------hhhhhhhcCch-hhhhhhh
Confidence 22357999999999988765 3579999999999988754210 00001100000 00000 0
Q ss_pred cCCCceeeeeeHHHHHHHHHHHHHHhccCCCCCcEEEecCC
Q 010075 294 GETKVIMDVIPVDMVVNAMIVAMVAHAKQPSDANIYHVGSS 334 (519)
Q Consensus 294 ~~~~~~~d~vpVDdva~aii~a~~~~~~~~~~~~iyni~s~ 334 (519)
...... .++.++|+|++++.++..... .-.++++++.+|
T Consensus 238 ~~~~~~-r~~~p~dvA~~v~~L~s~~~~-~itG~~i~vdGG 276 (280)
T 3pgx_A 238 MPVQPN-GFMTADEVADVVAWLAGDGSG-TLTGTQIPVDKG 276 (280)
T ss_dssp BTTBCS-SCBCHHHHHHHHHHHHSGGGT-TCSSCEEEESTT
T ss_pred cccCCC-CCCCHHHHHHHHHHHhCcccc-CCCCCEEEECCC
Confidence 111112 488999999999998864332 224789999887
|
| >1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A | Back alignment and structure |
|---|
Probab=99.79 E-value=1.7e-18 Score=168.27 Aligned_cols=220 Identities=15% Similarity=0.178 Sum_probs=148.8
Q ss_pred cCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 010075 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (519)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (519)
+++|+|+||||||+||++++++|++.| .+|+++.|+... .+.+.+ +... ..++.+
T Consensus 4 ~~~k~vlVtGasggiG~~~a~~l~~~G---~~V~~~~r~~~~---~~~~~~-------------~~~~------~~~~~~ 58 (251)
T 1zk4_A 4 LDGKVAIITGGTLGIGLAIATKFVEEG---AKVMITGRHSDV---GEKAAK-------------SVGT------PDQIQF 58 (251)
T ss_dssp TTTCEEEETTTTSHHHHHHHHHHHHTT---CEEEEEESCHHH---HHHHHH-------------HHCC------TTTEEE
T ss_pred CCCcEEEEeCCCChHHHHHHHHHHHCC---CEEEEEeCCHHH---HHHHHH-------------Hhhc------cCceEE
Confidence 678999999999999999999999998 678999886421 111111 1100 146889
Q ss_pred EeccCCCCCCCCChhhhHHHHh-------cCccEEEEcCccCCc-------cccHHHHHHHhHHHHHHHHHHHHh-c--c
Q 010075 90 VPGDISSEDLGLKDSNLKEELW-------NELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKK-C--V 152 (519)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~-------~~vdiViH~Aa~v~f-------~~~~~~~~~~Nv~gt~~ll~~a~~-~--~ 152 (519)
+.+|++++ +..+.++ .++|+|||+||.... .+.++..+++|+.|+..+.+.+.+ + .
T Consensus 59 ~~~D~~~~-------~~~~~~~~~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~ 131 (251)
T 1zk4_A 59 FQHDSSDE-------DGWTKLFDATEKAFGPVSTLVNNAGIAVNKSVEETTTAEWRKLLAVNLDGVFFGTRLGIQRMKNK 131 (251)
T ss_dssp EECCTTCH-------HHHHHHHHHHHHHHSSCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTS
T ss_pred EECCCCCH-------HHHHHHHHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhc
Confidence 99999953 2223333 359999999997532 245678899999998877766532 1 2
Q ss_pred CC-ceEEEEecceeecCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcHH
Q 010075 153 KL-KVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTY 231 (519)
Q Consensus 153 ~l-~~~V~vSTa~v~~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~Y 231 (519)
+. ++||++||...+... .....|
T Consensus 132 ~~~~~iv~isS~~~~~~~--------------------------------------------------------~~~~~Y 155 (251)
T 1zk4_A 132 GLGASIINMSSIEGFVGD--------------------------------------------------------PSLGAY 155 (251)
T ss_dssp SSCEEEEEECCGGGTSCC--------------------------------------------------------TTCHHH
T ss_pred CCCCEEEEeCCchhccCC--------------------------------------------------------CCCccc
Confidence 44 799999998654321 124579
Q ss_pred HHHHHHHHHHHHHh-------hcCCcEEEEecCccccCCCCCCCcccccccccHHHHHHhhcCCceeeccCCCceeeeee
Q 010075 232 VFTKTMGEMLMQQS-------KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIP 304 (519)
Q Consensus 232 ~~sK~~aE~lv~~~-------~~~lp~~IvRPs~V~g~~~~p~~gw~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~d~vp 304 (519)
+.||+..|.+++.+ ..+++++++|||.|.++.....+. ....... ........+++
T Consensus 156 ~~sK~a~~~~~~~~a~e~~~~~~~i~v~~v~Pg~v~t~~~~~~~~---------~~~~~~~--------~~~~~~~~~~~ 218 (251)
T 1zk4_A 156 NASKGAVRIMSKSAALDCALKDYDVRVNTVHPGYIKTPLVDDLPG---------AEEAMSQ--------RTKTPMGHIGE 218 (251)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTCSEEEEEEEECCBCCHHHHTSTT---------HHHHHTS--------TTTCTTSSCBC
T ss_pred hHHHHHHHHHHHHHHHHhcccCCCeEEEEEeeCcCcchhhhhcCc---------hhhhHHH--------hhcCCCCCCcC
Confidence 99999999888754 247999999999998865322110 0111100 01112235789
Q ss_pred HHHHHHHHHHHHHHhccCCCCCcEEEecCCC
Q 010075 305 VDMVVNAMIVAMVAHAKQPSDANIYHVGSSL 335 (519)
Q Consensus 305 VDdva~aii~a~~~~~~~~~~~~iyni~s~~ 335 (519)
++|+|++++.++..... ...++++++.+|.
T Consensus 219 ~~dva~~~~~l~~~~~~-~~~G~~~~v~gG~ 248 (251)
T 1zk4_A 219 PNDIAYICVYLASNESK-FATGSEFVVDGGY 248 (251)
T ss_dssp HHHHHHHHHHHHSGGGT-TCCSCEEEESTTG
T ss_pred HHHHHHHHHHHcCcccc-cccCcEEEECCCc
Confidence 99999999998864322 1236899998873
|
| >3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens} | Back alignment and structure |
|---|
Probab=99.79 E-value=1.6e-18 Score=170.07 Aligned_cols=226 Identities=13% Similarity=0.096 Sum_probs=150.5
Q ss_pred cCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 010075 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (519)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (519)
+++|+|+||||||+||++++++|++.| .+|+++.|+... .+.+. ++ ...++.+
T Consensus 10 l~~k~vlVTGas~gIG~~ia~~l~~~G---~~V~~~~r~~~~---~~~~~-------------~~--------~~~~~~~ 62 (263)
T 3ak4_A 10 LSGRKAIVTGGSKGIGAAIARALDKAG---ATVAIADLDVMA---AQAVV-------------AG--------LENGGFA 62 (263)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTT---CEEEEEESCHHH---HHHHH-------------HT--------CTTCCEE
T ss_pred CCCCEEEEeCCCChHHHHHHHHHHHCC---CEEEEEeCCHHH---HHHHH-------------HH--------HhcCCeE
Confidence 578999999999999999999999998 678888886421 11111 11 1136788
Q ss_pred EeccCCCCCCCCChhhhHHHHhc-------CccEEEEcCccCCc-------cccHHHHHHHhHHHHHHHHHHHHhc---c
Q 010075 90 VPGDISSEDLGLKDSNLKEELWN-------ELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKC---V 152 (519)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~~-------~vdiViH~Aa~v~f-------~~~~~~~~~~Nv~gt~~ll~~a~~~---~ 152 (519)
+.+|+++ .+..+.+++ ++|+|||+||.... .+.++..+++|+.|+.++++.+.+. .
T Consensus 63 ~~~D~~d-------~~~v~~~~~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~ 135 (263)
T 3ak4_A 63 VEVDVTK-------RASVDAAMQKAIDALGGFDLLCANAGVSTMRPAVDITDEEWDFNFDVNARGVFLANQIACRHFLAS 135 (263)
T ss_dssp EECCTTC-------HHHHHHHHHHHHHHHTCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHT
T ss_pred EEEeCCC-------HHHHHHHHHHHHHHcCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc
Confidence 9999995 332334443 79999999997542 2467888999999999998887542 1
Q ss_pred C-CceEEEEecceeecCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcHH
Q 010075 153 K-LKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTY 231 (519)
Q Consensus 153 ~-l~~~V~vSTa~v~~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~Y 231 (519)
+ ..++|++||...+... .....|
T Consensus 136 ~~~g~iv~isS~~~~~~~--------------------------------------------------------~~~~~Y 159 (263)
T 3ak4_A 136 NTKGVIVNTASLAAKVGA--------------------------------------------------------PLLAHY 159 (263)
T ss_dssp TCCCEEEEECCGGGTSCC--------------------------------------------------------TTCHHH
T ss_pred CCCeEEEEecccccccCC--------------------------------------------------------CCchhH
Confidence 3 5799999997653211 123579
Q ss_pred HHHHHHHHHHHHHh-----hcCCcEEEEecCccccCCCCCCCccc--ccccccHHHHHHhhcCCceeeccCCCceeeeee
Q 010075 232 VFTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWV--EDLKTINTLFVASAQGNLRCLVGETKVIMDVIP 304 (519)
Q Consensus 232 ~~sK~~aE~lv~~~-----~~~lp~~IvRPs~V~g~~~~p~~gw~--~~~~~~~~~i~~~~~g~~~~~~~~~~~~~d~vp 304 (519)
+.||+..|.+.+.. ..++++.++|||.|.++.......+. ..-............+ .....+++
T Consensus 160 ~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~p~~~~~~ 230 (263)
T 3ak4_A 160 SASKFAVFGWTQALAREMAPKNIRVNCVCPGFVKTAMQEREIIWEAELRGMTPEAVRAEYVSL---------TPLGRIEE 230 (263)
T ss_dssp HHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBTTHHHHHHHHHHHHHHTSCHHHHHHHHHHT---------CTTCSCBC
T ss_pred HHHHHHHHHHHHHHHHHHhHcCeEEEEEecccccChhhhhhccccccccccCcHHHHHHHHhc---------CCCCCCcC
Confidence 99999999888765 34899999999999876431100000 0000001111111111 12235789
Q ss_pred HHHHHHHHHHHHHHhccCCCCCcEEEecCCC
Q 010075 305 VDMVVNAMIVAMVAHAKQPSDANIYHVGSSL 335 (519)
Q Consensus 305 VDdva~aii~a~~~~~~~~~~~~iyni~s~~ 335 (519)
++|+|++++.++..... ...+++|++.+|.
T Consensus 231 ~~dvA~~v~~l~s~~~~-~~tG~~~~vdgG~ 260 (263)
T 3ak4_A 231 PEDVADVVVFLASDAAR-FMTGQGINVTGGV 260 (263)
T ss_dssp HHHHHHHHHHHHSGGGT-TCCSCEEEESSSS
T ss_pred HHHHHHHHHHHhCcccc-CCCCCEEEECcCE
Confidence 99999999998864322 2236899998873
|
| >2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A | Back alignment and structure |
|---|
Probab=99.79 E-value=2.5e-18 Score=167.94 Aligned_cols=226 Identities=17% Similarity=0.124 Sum_probs=149.8
Q ss_pred cCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 010075 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (519)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (519)
++||+|+||||||+||+++++.|++.| .+|+++.|+.. ....+.+. + ...++.+
T Consensus 2 l~~k~vlVTGas~giG~~ia~~l~~~G---~~V~~~~r~~~-~~~~~~l~-------------~---------~~~~~~~ 55 (255)
T 2q2v_A 2 LKGKTALVTGSTSGIGLGIAQVLARAG---ANIVLNGFGDP-APALAEIA-------------R---------HGVKAVH 55 (255)
T ss_dssp CTTCEEEESSCSSHHHHHHHHHHHHTT---CEEEEECSSCC-HHHHHHHH-------------T---------TSCCEEE
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCC---CEEEEEeCCch-HHHHHHHH-------------h---------cCCceEE
Confidence 468999999999999999999999998 67889888765 11111111 1 0246888
Q ss_pred EeccCCCCCCCCChhhhHHHHhc-------CccEEEEcCccCCc-------cccHHHHHHHhHHHHHHHHHHH----Hhc
Q 010075 90 VPGDISSEDLGLKDSNLKEELWN-------ELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFA----KKC 151 (519)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~~-------~vdiViH~Aa~v~f-------~~~~~~~~~~Nv~gt~~ll~~a----~~~ 151 (519)
+.+|+++ .+..+.+++ ++|+|||+||.... .+.++..+++|+.|+.++.+.+ ++
T Consensus 56 ~~~D~~~-------~~~v~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~- 127 (255)
T 2q2v_A 56 HPADLSD-------VAQIEALFALAEREFGGVDILVNNAGIQHVAPVEQFPLESWDKIIALNLSAVFHGTRLALPGMRA- 127 (255)
T ss_dssp ECCCTTS-------HHHHHHHHHHHHHHHSSCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHH-
T ss_pred EeCCCCC-------HHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHH-
Confidence 9999995 333334444 79999999997542 2467788999999887776665 33
Q ss_pred cCCceEEEEecceeecCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcHH
Q 010075 152 VKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTY 231 (519)
Q Consensus 152 ~~l~~~V~vSTa~v~~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~Y 231 (519)
.+..++|++||...+... .....|
T Consensus 128 ~~~g~iv~isS~~~~~~~--------------------------------------------------------~~~~~Y 151 (255)
T 2q2v_A 128 RNWGRIINIASVHGLVGS--------------------------------------------------------TGKAAY 151 (255)
T ss_dssp TTCEEEEEECCGGGTSCC--------------------------------------------------------TTBHHH
T ss_pred cCCcEEEEEcCchhccCC--------------------------------------------------------CCchhH
Confidence 256899999998654321 123579
Q ss_pred HHHHHHHHHHHHHh-----hcCCcEEEEecCccccCCCCCCCcccccccc-cHHHHHHhhcCCceeeccCCCceeeeeeH
Q 010075 232 VFTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKT-INTLFVASAQGNLRCLVGETKVIMDVIPV 305 (519)
Q Consensus 232 ~~sK~~aE~lv~~~-----~~~lp~~IvRPs~V~g~~~~p~~gw~~~~~~-~~~~i~~~~~g~~~~~~~~~~~~~d~vpV 305 (519)
+.||+..+.+.+.. ..++++++++||.|.++.......-...... ........ .........++++
T Consensus 152 ~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~p~~~~~~~ 223 (255)
T 2q2v_A 152 VAAKHGVVGLTKVVGLETATSNVTCNAICPGWVLTPLVQKQIDDRAANGGDPLQAQHDL--------LAEKQPSLAFVTP 223 (255)
T ss_dssp HHHHHHHHHHHHHHHHHTTTSSEEEEEEEESSBCCHHHHHHHHHHHHHTCCHHHHHHHH--------HTTTCTTCCCBCH
T ss_pred HHHHHHHHHHHHHHHHHhcccCcEEEEEeeCCCcCcchhhhcccccccccchHHHHHHH--------HhccCCCCCCcCH
Confidence 99999999888765 3479999999999987642110000000000 00000011 0112223468999
Q ss_pred HHHHHHHHHHHHHhccCCCCCcEEEecCC
Q 010075 306 DMVVNAMIVAMVAHAKQPSDANIYHVGSS 334 (519)
Q Consensus 306 Ddva~aii~a~~~~~~~~~~~~iyni~s~ 334 (519)
+|+|++++.++..... ...+++|++.+|
T Consensus 224 ~dvA~~~~~l~s~~~~-~~tG~~~~vdgG 251 (255)
T 2q2v_A 224 EHLGELVLFLCSEAGS-QVRGAAWNVDGG 251 (255)
T ss_dssp HHHHHHHHHHTSGGGT-TCCSCEEEESTT
T ss_pred HHHHHHHHHHhCCccC-CCCCCEEEECCC
Confidence 9999999988764322 223689999887
|
| >2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A* | Back alignment and structure |
|---|
Probab=99.79 E-value=4.4e-18 Score=166.68 Aligned_cols=225 Identities=20% Similarity=0.190 Sum_probs=151.3
Q ss_pred cCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 010075 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (519)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (519)
++||+|+||||+|+||++++++|++.| .+|+++.|+... .+.+.+ .+++. ..++.+
T Consensus 7 l~~k~vlVTGas~giG~~ia~~l~~~G---~~V~~~~r~~~~---~~~~~~---------~~~~~---------~~~~~~ 62 (260)
T 2ae2_A 7 LEGCTALVTGGSRGIGYGIVEELASLG---ASVYTCSRNQKE---LNDCLT---------QWRSK---------GFKVEA 62 (260)
T ss_dssp CTTCEEEEESCSSHHHHHHHHHHHHTT---CEEEEEESCHHH---HHHHHH---------HHHHT---------TCEEEE
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCC---CEEEEEeCCHHH---HHHHHH---------HHHhc---------CCcEEE
Confidence 678999999999999999999999998 678898886421 111111 11111 246889
Q ss_pred EeccCCCCCCCCChhhhHHHHh--------cCccEEEEcCccCCc-------cccHHHHHHHhHHHHHHHHHHHHhc---
Q 010075 90 VPGDISSEDLGLKDSNLKEELW--------NELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKC--- 151 (519)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~--------~~vdiViH~Aa~v~f-------~~~~~~~~~~Nv~gt~~ll~~a~~~--- 151 (519)
+.+|++++ +..+.++ .++|+|||+||.... .+.++..+++|+.|+.++++++...
T Consensus 63 ~~~D~~~~-------~~~~~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~ 135 (260)
T 2ae2_A 63 SVCDLSSR-------SERQELMNTVANHFHGKLNILVNNAGIVIYKEAKDYTVEDYSLIMSINFEAAYHLSVLAHPFLKA 135 (260)
T ss_dssp EECCTTCH-------HHHHHHHHHHHHHTTTCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHH
T ss_pred EEcCCCCH-------HHHHHHHHHHHHHcCCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHh
Confidence 99999953 2223333 579999999997542 2467788999999999999988431
Q ss_pred cCCceEEEEecceeecCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcHH
Q 010075 152 VKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTY 231 (519)
Q Consensus 152 ~~l~~~V~vSTa~v~~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~Y 231 (519)
.+..++|++||...+... .....|
T Consensus 136 ~~~g~iv~isS~~~~~~~--------------------------------------------------------~~~~~Y 159 (260)
T 2ae2_A 136 SERGNVVFISSVSGALAV--------------------------------------------------------PYEAVY 159 (260)
T ss_dssp TSSEEEEEECCGGGTSCC--------------------------------------------------------TTCHHH
T ss_pred cCCcEEEEEcchhhccCC--------------------------------------------------------CCcchH
Confidence 356899999997654211 123579
Q ss_pred HHHHHHHHHHHHHh-----hcCCcEEEEecCccccCCCCCCCcccccccccHHHHHHhhcCCceeeccCCCceeeeeeHH
Q 010075 232 VFTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVD 306 (519)
Q Consensus 232 ~~sK~~aE~lv~~~-----~~~lp~~IvRPs~V~g~~~~p~~gw~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~d~vpVD 306 (519)
+.||+..|.+.+.. ..++++.+++||.|.++.... +... ......+.....+ .....+++++
T Consensus 160 ~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~---~~~~-~~~~~~~~~~~~~---------~~~~~~~~~~ 226 (260)
T 2ae2_A 160 GATKGAMDQLTRCLAFEWAKDNIRVNGVGPGVIATSLVEM---TIQD-PEQKENLNKLIDR---------CALRRMGEPK 226 (260)
T ss_dssp HHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCSHHHHH---HTTS-HHHHHHHHHHHHT---------STTCSCBCHH
T ss_pred HHHHHHHHHHHHHHHHHHhhcCcEEEEEecCCCCCcchhh---hccC-hhhHHHHHHHHhc---------CCCCCCCCHH
Confidence 99999999998765 347999999999987753210 0000 0000100011111 1223578999
Q ss_pred HHHHHHHHHHHHhccCCCCCcEEEecCCC
Q 010075 307 MVVNAMIVAMVAHAKQPSDANIYHVGSSL 335 (519)
Q Consensus 307 dva~aii~a~~~~~~~~~~~~iyni~s~~ 335 (519)
|+|++++.++..... .-.++++++.+|.
T Consensus 227 dvA~~v~~l~s~~~~-~~tG~~~~vdgG~ 254 (260)
T 2ae2_A 227 ELAAMVAFLCFPAAS-YVTGQIIYVDGGL 254 (260)
T ss_dssp HHHHHHHHHHSGGGT-TCCSCEEEESTTG
T ss_pred HHHHHHHHHcCcccc-CCCCCEEEECCCc
Confidence 999999988753322 2237899998874
|
| >3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.79 E-value=3.7e-18 Score=169.38 Aligned_cols=233 Identities=15% Similarity=0.109 Sum_probs=150.2
Q ss_pred cCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 010075 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (519)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (519)
+.+|+++||||+|+||++++++|++.| .+|+++.|+... ..+.+.++ +.+. ...++.+
T Consensus 23 l~~k~~lVTGas~GIG~~ia~~la~~G---~~V~~~~r~~~~--~~~~~~~~---------~~~~--------~~~~~~~ 80 (281)
T 3v2h_A 23 MMTKTAVITGSTSGIGLAIARTLAKAG---ANIVLNGFGAPD--EIRTVTDE---------VAGL--------SSGTVLH 80 (281)
T ss_dssp CTTCEEEEETCSSHHHHHHHHHHHHTT---CEEEEECCCCHH--HHHHHHHH---------HHTT--------CSSCEEE
T ss_pred cCCCEEEEeCCCcHHHHHHHHHHHHCC---CEEEEEeCCChH--HHHHHHHH---------Hhhc--------cCCcEEE
Confidence 578999999999999999999999999 678888885321 11222211 1111 1367899
Q ss_pred EeccCCCCCCCCChhhhHHHHh-------cCccEEEEcCccCCc-------cccHHHHHHHhHHHHHHHHHHHHhc---c
Q 010075 90 VPGDISSEDLGLKDSNLKEELW-------NELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKC---V 152 (519)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~-------~~vdiViH~Aa~v~f-------~~~~~~~~~~Nv~gt~~ll~~a~~~---~ 152 (519)
+.+|++++ +..+.++ .++|++||+||.... .+.++..+++|+.|+.++++.+... .
T Consensus 81 ~~~Dv~d~-------~~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~ 153 (281)
T 3v2h_A 81 HPADMTKP-------SEIADMMAMVADRFGGADILVNNAGVQFVEKIEDFPVEQWDRIIAVNLSSSFHTIRGAIPPMKKK 153 (281)
T ss_dssp ECCCTTCH-------HHHHHHHHHHHHHTSSCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH
T ss_pred EeCCCCCH-------HHHHHHHHHHHHHCCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc
Confidence 99999963 3233333 379999999998542 2467788999999999999987431 2
Q ss_pred CCceEEEEecceeecCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcHHH
Q 010075 153 KLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYV 232 (519)
Q Consensus 153 ~l~~~V~vSTa~v~~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~Y~ 232 (519)
+..++|++||...+... .....|+
T Consensus 154 ~~g~iv~isS~~~~~~~--------------------------------------------------------~~~~~Y~ 177 (281)
T 3v2h_A 154 GWGRIINIASAHGLVAS--------------------------------------------------------PFKSAYV 177 (281)
T ss_dssp TCEEEEEECCGGGTSCC--------------------------------------------------------TTCHHHH
T ss_pred CCCEEEEECCcccccCC--------------------------------------------------------CCchHHH
Confidence 55789999997654211 2235799
Q ss_pred HHHHHHHHHHHHh-----hcCCcEEEEecCccccCCCCCCCcccccccccHHHHHHhhcCCceeeccCCCceeeeeeHHH
Q 010075 233 FTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDM 307 (519)
Q Consensus 233 ~sK~~aE~lv~~~-----~~~lp~~IvRPs~V~g~~~~p~~gw~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~d~vpVDd 307 (519)
.||+..+.+.+.. ..++++..++||.|.++.............+. . ..........++.....++.++|
T Consensus 178 asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~~~~~~~~~~---~---~~~~~~~~~~~~~p~~r~~~~ed 251 (281)
T 3v2h_A 178 AAKHGIMGLTKTVALEVAESGVTVNSICPGYVLTPLVEKQIPDQARTRGI---T---EEQVINEVMLKGQPTKKFITVEQ 251 (281)
T ss_dssp HHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCC----------------------------------CCTTCSCBCHHH
T ss_pred HHHHHHHHHHHHHHHHhhhcCcEEEEEECCCCcCcchhhhcchhhhhcCC---C---HHHHHHHHHHhcCCCCCccCHHH
Confidence 9999999888755 35799999999999887542211000000000 0 00000111233345567899999
Q ss_pred HHHHHHHHHHHhccCCCCCcEEEecCC
Q 010075 308 VVNAMIVAMVAHAKQPSDANIYHVGSS 334 (519)
Q Consensus 308 va~aii~a~~~~~~~~~~~~iyni~s~ 334 (519)
+|++++.++..... .-.++++++.+|
T Consensus 252 vA~~v~~L~s~~a~-~itG~~i~vdGG 277 (281)
T 3v2h_A 252 VASLALYLAGDDAA-QITGTHVSMDGG 277 (281)
T ss_dssp HHHHHHHHHSSGGG-GCCSCEEEESTT
T ss_pred HHHHHHHHcCCCcC-CCCCcEEEECCC
Confidence 99999998864322 123789999887
|
| >2ph3_A 3-oxoacyl-[acyl carrier protein] reductase; TTHA0415, structural genomics, southea collaboratory for structural genomics, secsg; 1.91A {Thermus thermophilus HB8} | Back alignment and structure |
|---|
Probab=99.79 E-value=3.5e-18 Score=165.22 Aligned_cols=217 Identities=14% Similarity=0.133 Sum_probs=143.5
Q ss_pred CCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEE-EecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE-
Q 010075 12 NKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLF-VRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF- 89 (519)
Q Consensus 12 ~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~L-vR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~- 89 (519)
+|+|+||||||+||++++++|++.| .+|+++ .|+... .+++.++ ++.. ..++..
T Consensus 1 ~k~vlITGasggiG~~~a~~l~~~G---~~v~~~~~r~~~~---~~~~~~~---------~~~~---------~~~~~~~ 56 (245)
T 2ph3_A 1 MRKALITGASRGIGRAIALRLAEDG---FALAIHYGQNREK---AEEVAEE---------ARRR---------GSPLVAV 56 (245)
T ss_dssp CCEEEETTTTSHHHHHHHHHHHTTT---CEEEEEESSCHHH---HHHHHHH---------HHHT---------TCSCEEE
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCC---CEEEEEcCCCHHH---HHHHHHH---------HHhc---------CCceEEE
Confidence 4789999999999999999999988 577887 565321 1222111 1111 135566
Q ss_pred EeccCCCCCCCCChhhhHHHH-------hcCccEEEEcCccCCc-------cccHHHHHHHhHHHHHHHHHH----HHhc
Q 010075 90 VPGDISSEDLGLKDSNLKEEL-------WNELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNF----AKKC 151 (519)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l-------~~~vdiViH~Aa~v~f-------~~~~~~~~~~Nv~gt~~ll~~----a~~~ 151 (519)
+.+|++++ +..+.+ ..++|+|||+||.... .+.++..+++|+.|+.++++. +++.
T Consensus 57 ~~~D~~~~-------~~~~~~~~~~~~~~~~~d~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~ 129 (245)
T 2ph3_A 57 LGANLLEA-------EAATALVHQAAEVLGGLDTLVNNAGITRDTLLVRMKDEDWEAVLEANLSAVFRTTREAVKLMMKA 129 (245)
T ss_dssp EECCTTSH-------HHHHHHHHHHHHHHTCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH
T ss_pred EeccCCCH-------HHHHHHHHHHHHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhccHHHHHHHHHHHHHHHhc
Confidence 89999953 222333 3479999999997542 245778899999996655554 4443
Q ss_pred cCCceEEEEecceeecCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcHH
Q 010075 152 VKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTY 231 (519)
Q Consensus 152 ~~l~~~V~vSTa~v~~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~Y 231 (519)
+.++||++||....... .....|
T Consensus 130 -~~~~iv~~sS~~~~~~~--------------------------------------------------------~~~~~Y 152 (245)
T 2ph3_A 130 -RFGRIVNITSVVGILGN--------------------------------------------------------PGQANY 152 (245)
T ss_dssp -TCEEEEEECCTHHHHCC--------------------------------------------------------SSBHHH
T ss_pred -CCCEEEEEeChhhccCC--------------------------------------------------------CCCcch
Confidence 67899999997543211 123579
Q ss_pred HHHHHHHHHHHHHh-----hcCCcEEEEecCccccCCCCCCCcccccccccHHHHHHhhcCCceeeccCCCceeeeeeHH
Q 010075 232 VFTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVD 306 (519)
Q Consensus 232 ~~sK~~aE~lv~~~-----~~~lp~~IvRPs~V~g~~~~p~~gw~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~d~vpVD 306 (519)
+.||+..|.+.+.+ ..+++++++||+.|.++..... ..........+. ....+++++
T Consensus 153 ~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~---------~~~~~~~~~~~~---------~~~~~~~~~ 214 (245)
T 2ph3_A 153 VASKAGLIGFTRAVAKEYAQRGITVNAVAPGFIETEMTERL---------PQEVKEAYLKQI---------PAGRFGRPE 214 (245)
T ss_dssp HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTS---------CHHHHHHHHHTC---------TTCSCBCHH
T ss_pred HHHHHHHHHHHHHHHHHHHHcCeEEEEEEEEeecCcchhhc---------CHHHHHHHHhcC---------CCCCCcCHH
Confidence 99999888887754 3479999999999987643211 111111111111 123578999
Q ss_pred HHHHHHHHHHHHhccCCCCCcEEEecCCC
Q 010075 307 MVVNAMIVAMVAHAKQPSDANIYHVGSSL 335 (519)
Q Consensus 307 dva~aii~a~~~~~~~~~~~~iyni~s~~ 335 (519)
|+|++++.++..... ...+++|++++|.
T Consensus 215 dva~~~~~l~~~~~~-~~~G~~~~v~gg~ 242 (245)
T 2ph3_A 215 EVAEAVAFLVSEKAG-YITGQTLCVDGGL 242 (245)
T ss_dssp HHHHHHHHHTSGGGT-TCCSCEEEESTTC
T ss_pred HHHHHHHHHhCcccc-cccCCEEEECCCC
Confidence 999999988864322 2236899998873
|
| >1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex, oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi} SCOP: c.2.1.2 PDB: 1mxf_A* | Back alignment and structure |
|---|
Probab=99.79 E-value=5.6e-18 Score=167.26 Aligned_cols=224 Identities=13% Similarity=0.096 Sum_probs=148.7
Q ss_pred hcCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEe-cCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCce
Q 010075 9 FLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVR-AADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKI 87 (519)
Q Consensus 9 ~~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR-~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v 87 (519)
-++||+|+||||+|+||+++++.|++.| .+|+++.| +.. ..+.+.++ +++.. ..++
T Consensus 8 ~~~~k~~lVTGas~gIG~~ia~~l~~~G---~~V~~~~r~~~~---~~~~~~~~---------~~~~~--------~~~~ 64 (276)
T 1mxh_A 8 ASECPAAVITGGARRIGHSIAVRLHQQG---FRVVVHYRHSEG---AAQRLVAE---------LNAAR--------AGSA 64 (276)
T ss_dssp ---CCEEEETTCSSHHHHHHHHHHHHTT---CEEEEEESSCHH---HHHHHHHH---------HHHHS--------TTCE
T ss_pred ccCCCEEEEeCCCcHHHHHHHHHHHHCC---CEEEEEeCCChH---HHHHHHHH---------HHHhc--------CCce
Confidence 4688999999999999999999999998 67899988 421 12222211 11110 2468
Q ss_pred EEEeccCCCCCCCCChhhhHHHHh-------cCccEEEEcCccCCcc------------------ccHHHHHHHhHHHHH
Q 010075 88 TFVPGDISSEDLGLKDSNLKEELW-------NELDIMVNSAAITKFD------------------ERYDVAFGINTLGVI 142 (519)
Q Consensus 88 ~~v~gDl~~~~lgls~~~~~~~l~-------~~vdiViH~Aa~v~f~------------------~~~~~~~~~Nv~gt~ 142 (519)
.++.+|++++.. ..+..+.++ .++|+|||+||..... +.++..+++|+.|+.
T Consensus 65 ~~~~~Dl~~~~~---~~~~~~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~ 141 (276)
T 1mxh_A 65 VLCKGDLSLSSS---LLDCCEDIIDCSFRAFGRCDVLVNNASAYYPTPLLPGDDTNGAADAKPIDAQVAELFGSNAVAPL 141 (276)
T ss_dssp EEEECCCSSSTT---HHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCSCC-----------CHHHHHHHHHHHHTHHHH
T ss_pred EEEeccCCCccc---cHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCCccccCcccccccccchHHHHHHHHHhccHHHH
Confidence 899999996410 002222333 3799999999975321 566788999999999
Q ss_pred HHHHHHHhc--cCC------ceEEEEecceeecCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHH
Q 010075 143 HLVNFAKKC--VKL------KVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFM 214 (519)
Q Consensus 143 ~ll~~a~~~--~~l------~~~V~vSTa~v~~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 214 (519)
++++.+.+. .+. .++|++||...+...
T Consensus 142 ~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~--------------------------------------------- 176 (276)
T 1mxh_A 142 FLIRAFARRQGEGGAWRSRNLSVVNLCDAMTDLPL--------------------------------------------- 176 (276)
T ss_dssp HHHHHHHHTC-------CCCEEEEEECCGGGGSCC---------------------------------------------
T ss_pred HHHHHHHHHHhcCCCCCCCCcEEEEECchhhcCCC---------------------------------------------
Confidence 999998763 233 789999998654321
Q ss_pred hhccccccccCCCCcHHHHHHHHHHHHHHHh-----hcCCcEEEEecCccccCCCCCCCcccccccccHHHHHHhhcCCc
Q 010075 215 KNLGTERAKLHGWPNTYVFTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNL 289 (519)
Q Consensus 215 ~~lg~~~~~~~~~~n~Y~~sK~~aE~lv~~~-----~~~lp~~IvRPs~V~g~~~~p~~gw~~~~~~~~~~i~~~~~g~~ 289 (519)
.....|+.||+..+.+.+.+ ..++.+.+++||.|.++ . ..+ ...........
T Consensus 177 -----------~~~~~Y~asK~a~~~l~~~la~e~~~~gi~v~~v~PG~v~t~-~-~~~---------~~~~~~~~~~~- 233 (276)
T 1mxh_A 177 -----------PGFCVYTMAKHALGGLTRAAALELAPRHIRVNAVAPGLSLLP-P-AMP---------QETQEEYRRKV- 233 (276)
T ss_dssp -----------TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSCC-S-SSC---------HHHHHHHHTTC-
T ss_pred -----------CCCeehHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCcccCC-c-cCC---------HHHHHHHHhcC-
Confidence 12357999999999988765 34899999999999887 2 111 11112221111
Q ss_pred eeeccCCCceeeeeeHHHHHHHHHHHHHHhccCCCCCcEEEecCC
Q 010075 290 RCLVGETKVIMDVIPVDMVVNAMIVAMVAHAKQPSDANIYHVGSS 334 (519)
Q Consensus 290 ~~~~~~~~~~~d~vpVDdva~aii~a~~~~~~~~~~~~iyni~s~ 334 (519)
+. .+++.+++|+|++++.++..... .-.++++++.+|
T Consensus 234 ---p~----~r~~~~~~dva~~v~~l~s~~~~-~~tG~~~~vdgG 270 (276)
T 1mxh_A 234 ---PL----GQSEASAAQIADAIAFLVSKDAG-YITGTTLKVDGG 270 (276)
T ss_dssp ---TT----TSCCBCHHHHHHHHHHHHSGGGT-TCCSCEEEESTT
T ss_pred ---CC----CCCCCCHHHHHHHHHHHhCcccc-CccCcEEEECCc
Confidence 10 12278899999999998864322 223689999887
|
| >2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A* | Back alignment and structure |
|---|
Probab=99.79 E-value=5.2e-18 Score=166.12 Aligned_cols=217 Identities=11% Similarity=0.104 Sum_probs=148.8
Q ss_pred cCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 010075 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (519)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (519)
+++|+|+||||||+||++++++|++.| .+|+++.|+.... +.+.++ . ..++.+
T Consensus 10 ~~~k~vlVTGasggiG~~~a~~l~~~G---~~V~~~~r~~~~~---~~~~~~-------------~--------~~~~~~ 62 (265)
T 2o23_A 10 VKGLVAVITGGASGLGLATAERLVGQG---ASAVLLDLPNSGG---EAQAKK-------------L--------GNNCVF 62 (265)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTT---CEEEEEECTTSSH---HHHHHH-------------H--------CTTEEE
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHCC---CEEEEEeCCcHhH---HHHHHH-------------h--------CCceEE
Confidence 678999999999999999999999998 6789999976432 111111 1 256889
Q ss_pred EeccCCCCCCCCChhhhHHHHhc-------CccEEEEcCccCCc-------------cccHHHHHHHhHHHHHHHHHHHH
Q 010075 90 VPGDISSEDLGLKDSNLKEELWN-------ELDIMVNSAAITKF-------------DERYDVAFGINTLGVIHLVNFAK 149 (519)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~~-------~vdiViH~Aa~v~f-------------~~~~~~~~~~Nv~gt~~ll~~a~ 149 (519)
+.+|+++ .+..+.+++ ++|+|||+||.... .+.++..+++|+.|+.++++.+.
T Consensus 63 ~~~D~~~-------~~~v~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~ 135 (265)
T 2o23_A 63 APADVTS-------EKDVQTALALAKGKFGRVDVAVNCAGIAVASKTYNLKKGQTHTLEDFQRVLDVNLMGTFNVIRLVA 135 (265)
T ss_dssp EECCTTC-------HHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCSEETTTTEECCHHHHHHHHHHHTHHHHHHHHHHH
T ss_pred EEcCCCC-------HHHHHHHHHHHHHHCCCCCEEEECCccCCCCccccccccCCCCHHHHHHHHHHHhHHHHHHHHHHH
Confidence 9999995 332334443 79999999997532 23577889999999999999886
Q ss_pred hc---c------CCceEEEEecceeecCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhcccc
Q 010075 150 KC---V------KLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTE 220 (519)
Q Consensus 150 ~~---~------~l~~~V~vSTa~v~~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~ 220 (519)
+. . +..++|++||...+...
T Consensus 136 ~~~~~~~~~~~~~~~~iv~isS~~~~~~~--------------------------------------------------- 164 (265)
T 2o23_A 136 GEMGQNEPDQGGQRGVIINTASVAAFEGQ--------------------------------------------------- 164 (265)
T ss_dssp HHHTTSCCCTTSCCEEEEEECCTHHHHCC---------------------------------------------------
T ss_pred HHHHhcccccCCCCcEEEEeCChhhcCCC---------------------------------------------------
Confidence 53 1 45789999998765321
Q ss_pred ccccCCCCcHHHHHHHHHHHHHHHh-----hcCCcEEEEecCccccCCCCCCCcccccccccHHHHHHhhcCCceeeccC
Q 010075 221 RAKLHGWPNTYVFTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGE 295 (519)
Q Consensus 221 ~~~~~~~~n~Y~~sK~~aE~lv~~~-----~~~lp~~IvRPs~V~g~~~~p~~gw~~~~~~~~~~i~~~~~g~~~~~~~~ 295 (519)
.....|+.||+..+.+.+.. ..++++.+++||.|.++.....+. . ........ .+.
T Consensus 165 -----~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~---~------~~~~~~~~----~~~- 225 (265)
T 2o23_A 165 -----VGQAAYSASKGGIVGMTLPIARDLAPIGIRVMTIAPGLFGTPLLTSLPE---K------VCNFLASQ----VPF- 225 (265)
T ss_dssp -----TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCC-------------------CHHHHT----CSS-
T ss_pred -----CCCchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEEeccccCccccccCH---H------HHHHHHHc----CCC-
Confidence 12357999999888887754 347999999999997764321110 0 00000000 010
Q ss_pred CCceeeeeeHHHHHHHHHHHHHHhccCCCCCcEEEecCCCC
Q 010075 296 TKVIMDVIPVDMVVNAMIVAMVAHAKQPSDANIYHVGSSLR 336 (519)
Q Consensus 296 ~~~~~d~vpVDdva~aii~a~~~~~~~~~~~~iyni~s~~~ 336 (519)
...++.++|+|++++.++... .-.++++++.+|..
T Consensus 226 ---~~~~~~~~dva~~~~~l~~~~---~~~G~~i~vdgG~~ 260 (265)
T 2o23_A 226 ---PSRLGDPAEYAHLVQAIIENP---FLNGEVIRLDGAIR 260 (265)
T ss_dssp ---SCSCBCHHHHHHHHHHHHHCT---TCCSCEEEESTTCC
T ss_pred ---cCCCCCHHHHHHHHHHHhhcC---ccCceEEEECCCEe
Confidence 023678999999999988532 22368899988743
|
| >2bd0_A Sepiapterin reductase; oxidoreductase; HET: NAP BIO; 1.70A {Chlorobium tepidum} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.79 E-value=8.4e-18 Score=162.66 Aligned_cols=196 Identities=15% Similarity=0.178 Sum_probs=139.9
Q ss_pred CCEEEEeCCccHHHHHHHHHHHHhCCCc----cEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCce
Q 010075 12 NKTILVSGVTGFVAKVFIEKILRVQPNV----KKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKI 87 (519)
Q Consensus 12 ~k~VlITGaTGFlG~~Lv~~LL~~g~~v----~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v 87 (519)
+|+|+||||||+||++++++|++.|... .+|+++.|+.. ..+++.++ ++. ...++
T Consensus 2 ~k~vlITGasggiG~~la~~l~~~G~~~~~~~~~V~~~~r~~~---~~~~~~~~---------~~~---------~~~~~ 60 (244)
T 2bd0_A 2 KHILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAA---DLEKISLE---------CRA---------EGALT 60 (244)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHHHTTTCTTCCEEEEEEESCHH---HHHHHHHH---------HHT---------TTCEE
T ss_pred CCEEEEECCCChHHHHHHHHHHHhcCcccccceEEEEEeCCHH---HHHHHHHH---------HHc---------cCCee
Confidence 6899999999999999999999998310 07888888642 12222211 111 02568
Q ss_pred EEEeccCCCCCCCCChhhhHHHHh-------cCccEEEEcCccCCc-------cccHHHHHHHhHHHHHHHHHHHHhc--
Q 010075 88 TFVPGDISSEDLGLKDSNLKEELW-------NELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKC-- 151 (519)
Q Consensus 88 ~~v~gDl~~~~lgls~~~~~~~l~-------~~vdiViH~Aa~v~f-------~~~~~~~~~~Nv~gt~~ll~~a~~~-- 151 (519)
.++.+|++++ +..+.++ .++|+|||+||.... .+.++..+++|+.|+.++++.+...
T Consensus 61 ~~~~~D~~~~-------~~v~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~ 133 (244)
T 2bd0_A 61 DTITADISDM-------ADVRRLTTHIVERYGHIDCLVNNAGVGRFGALSDLTEEDFDYTMNTNLKGTFFLTQALFALME 133 (244)
T ss_dssp EEEECCTTSH-------HHHHHHHHHHHHHTSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHH
T ss_pred eEEEecCCCH-------HHHHHHHHHHHHhCCCCCEEEEcCCcCCcCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHH
Confidence 8999999953 3233333 379999999997643 2467888999999999999887542
Q ss_pred -cCCceEEEEecceeecCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcH
Q 010075 152 -VKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNT 230 (519)
Q Consensus 152 -~~l~~~V~vSTa~v~~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~ 230 (519)
.+..++|++||...+... .....
T Consensus 134 ~~~~~~iv~isS~~~~~~~--------------------------------------------------------~~~~~ 157 (244)
T 2bd0_A 134 RQHSGHIFFITSVAATKAF--------------------------------------------------------RHSSI 157 (244)
T ss_dssp HHTCEEEEEECCGGGTSCC--------------------------------------------------------TTCHH
T ss_pred hCCCCEEEEEecchhcCCC--------------------------------------------------------CCCch
Confidence 256899999998765321 22467
Q ss_pred HHHHHHHHHHHHHHh-----hcCCcEEEEecCccccCCCCCCCcccccccccHHHHHHhhcCCceeeccCCCceeeeeeH
Q 010075 231 YVFTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPV 305 (519)
Q Consensus 231 Y~~sK~~aE~lv~~~-----~~~lp~~IvRPs~V~g~~~~p~~gw~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~d~vpV 305 (519)
|+.||+..|.+++.. ..+++++++|||.|.++.....+. . . ...++++
T Consensus 158 Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~---~----------------------~--~~~~~~~ 210 (244)
T 2bd0_A 158 YCMSKFGQRGLVETMRLYARKCNVRITDVQPGAVYTPMWGKVDD---E----------------------M--QALMMMP 210 (244)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCSTTTCCCCS---T----------------------T--GGGSBCH
T ss_pred hHHHHHHHHHHHHHHHHHhhccCcEEEEEECCCccchhhhhccc---c----------------------c--cccCCCH
Confidence 999999999988654 357999999999999875422110 0 0 1257899
Q ss_pred HHHHHHHHHHHHH
Q 010075 306 DMVVNAMIVAMVA 318 (519)
Q Consensus 306 Ddva~aii~a~~~ 318 (519)
+|+|++++.++..
T Consensus 211 ~dva~~~~~l~~~ 223 (244)
T 2bd0_A 211 EDIAAPVVQAYLQ 223 (244)
T ss_dssp HHHHHHHHHHHTS
T ss_pred HHHHHHHHHHHhC
Confidence 9999999998863
|
| >3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp} | Back alignment and structure |
|---|
Probab=99.79 E-value=2.2e-18 Score=167.87 Aligned_cols=219 Identities=19% Similarity=0.160 Sum_probs=126.8
Q ss_pred cCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 010075 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (519)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (519)
+++|+|+||||+|+||++++++|++.| .+|+++.|+... .+.+.++ +++. ..++.+
T Consensus 7 ~~~k~vlITGas~giG~~~a~~l~~~G---~~V~~~~r~~~~---~~~~~~~---------~~~~---------~~~~~~ 62 (253)
T 3qiv_A 7 FENKVGIVTGSGGGIGQAYAEALAREG---AAVVVADINAEA---AEAVAKQ---------IVAD---------GGTAIS 62 (253)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHTT---CEEEEEESCHHH---HHHHHHH---------HHHT---------TCEEEE
T ss_pred cCCCEEEEECCCChHHHHHHHHHHHCC---CEEEEEcCCHHH---HHHHHHH---------HHhc---------CCcEEE
Confidence 578999999999999999999999998 678888886422 2222211 1111 257889
Q ss_pred EeccCCCCCCCCChhhhHHHHh-------cCccEEEEcCccCC----------ccccHHHHHHHhHHHHHHHHHHHHhc-
Q 010075 90 VPGDISSEDLGLKDSNLKEELW-------NELDIMVNSAAITK----------FDERYDVAFGINTLGVIHLVNFAKKC- 151 (519)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~-------~~vdiViH~Aa~v~----------f~~~~~~~~~~Nv~gt~~ll~~a~~~- 151 (519)
+.+|++++ +..+.++ .++|+|||+||... -.+.++..+++|+.|+..+.+.+...
T Consensus 63 ~~~D~~~~-------~~~~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~ 135 (253)
T 3qiv_A 63 VAVDVSDP-------ESAKAMADRTLAEFGGIDYLVNNAAIFGGMKLDFLLTIDPEYYKKFMSVNLDGALWCTRAVYKKM 135 (253)
T ss_dssp EECCTTSH-------HHHHHHHHHHHHHHSCCCEEEECCCCCCGGGGGCTTTSCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEccCCCH-------HHHHHHHHHHHHHcCCCCEEEECCCcCCCCCCcccccCCHHHHHHHHhhhhHHHHHHHHHHHHHH
Confidence 99999963 3233443 37999999999732 12567788999999966666554321
Q ss_pred --cCCceEEEEecceeecCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCc
Q 010075 152 --VKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPN 229 (519)
Q Consensus 152 --~~l~~~V~vSTa~v~~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n 229 (519)
.+..++|++||...+. +..
T Consensus 136 ~~~~~g~iv~isS~~~~~-----------------------------------------------------------~~~ 156 (253)
T 3qiv_A 136 TKRGGGAIVNQSSTAAWL-----------------------------------------------------------YSN 156 (253)
T ss_dssp HHHTCEEEEEECC-------------------------------------------------------------------
T ss_pred HhcCCCEEEEECCccccC-----------------------------------------------------------CCc
Confidence 2567899999986542 124
Q ss_pred HHHHHHHHHHHHHHHh-----hcCCcEEEEecCccccCCCCCCCcccccccccHHHHHHhhcCCceeeccCCCceeeeee
Q 010075 230 TYVFTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIP 304 (519)
Q Consensus 230 ~Y~~sK~~aE~lv~~~-----~~~lp~~IvRPs~V~g~~~~p~~gw~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~d~vp 304 (519)
.|+.||+..|.+++.+ ..++++..++||.|.++...... +......+..+ .....+..
T Consensus 157 ~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~--------~~~~~~~~~~~---------~~~~~~~~ 219 (253)
T 3qiv_A 157 YYGLAKVGINGLTQQLSRELGGRNIRINAIAPGPIDTEANRTTT--------PKEMVDDIVKG---------LPLSRMGT 219 (253)
T ss_dssp ---CCHHHHHHHHHHHHHHTTTTTEEEEEEEC------------------------------------------------
T ss_pred hhHHHHHHHHHHHHHHHHHHhhcCeEEEEEEecCCcccchhhcC--------cHHHHHHHhcc---------CCCCCCCC
Confidence 5999999998888765 34799999999999887542110 00111111111 12234567
Q ss_pred HHHHHHHHHHHHHHhccCCCCCcEEEecCCCC
Q 010075 305 VDMVVNAMIVAMVAHAKQPSDANIYHVGSSLR 336 (519)
Q Consensus 305 VDdva~aii~a~~~~~~~~~~~~iyni~s~~~ 336 (519)
++|+|++++.++..... .-.+++|++.+|..
T Consensus 220 ~~dva~~~~~l~s~~~~-~~tG~~~~vdgG~~ 250 (253)
T 3qiv_A 220 PDDLVGMCLFLLSDEAS-WITGQIFNVDGGQI 250 (253)
T ss_dssp CCHHHHHHHHHHSGGGT-TCCSCEEEC-----
T ss_pred HHHHHHHHHHHcCcccc-CCCCCEEEECCCee
Confidence 89999999988864332 22478999998843
|
| >3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp} | Back alignment and structure |
|---|
Probab=99.79 E-value=1.1e-17 Score=165.40 Aligned_cols=241 Identities=17% Similarity=0.162 Sum_probs=156.6
Q ss_pred hhcCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCccc------HHHHHHHHHhhhhhHHHHHhhhcccccc
Q 010075 8 EFLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDS------AALRFQNEVLAKDVFNVLKEKWGTRLNS 81 (519)
Q Consensus 8 ~~~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~------~~~rl~~~~~~~~~f~~l~~~~~~~~~~ 81 (519)
.-++||+|+||||+|+||+++++.|++.| .+|+++.|+..... ..+++.+ . .+.+..
T Consensus 9 ~~l~gk~vlVTGas~gIG~~ia~~l~~~G---~~V~~~~r~~~~~~~~~~~~~~~~~~~-~-----~~~~~~-------- 71 (278)
T 3sx2_A 9 GPLTGKVAFITGAARGQGRAHAVRLAADG---ADIIAVDLCDQIASVPYPLATPEELAA-T-----VKLVED-------- 71 (278)
T ss_dssp CTTTTCEEEEESTTSHHHHHHHHHHHHTT---CEEEEEECCSCCTTCSSCCCCHHHHHH-H-----HHHHHH--------
T ss_pred CCCCCCEEEEECCCChHHHHHHHHHHHCC---CeEEEEecccccccccccccchHHHHH-H-----HHHHHh--------
Confidence 34789999999999999999999999999 67888888732100 0112211 0 001111
Q ss_pred ccCCceEEEeccCCCCCCCCChhhhHHHHh-------cCccEEEEcCccCCc---cccHHHHHHHhHHHHHHHHHHHHhc
Q 010075 82 FISEKITFVPGDISSEDLGLKDSNLKEELW-------NELDIMVNSAAITKF---DERYDVAFGINTLGVIHLVNFAKKC 151 (519)
Q Consensus 82 ~~~~~v~~v~gDl~~~~lgls~~~~~~~l~-------~~vdiViH~Aa~v~f---~~~~~~~~~~Nv~gt~~ll~~a~~~ 151 (519)
...++.++.+|++++ +..+.++ .++|++||+||.... .+.++..+++|+.|+.++++.+...
T Consensus 72 -~~~~~~~~~~D~~~~-------~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~ 143 (278)
T 3sx2_A 72 -IGSRIVARQADVRDR-------ESLSAALQAGLDELGRLDIVVANAGIAPMSAGDDGWHDVIDVNLTGVYHTIKVAIPT 143 (278)
T ss_dssp -HTCCEEEEECCTTCH-------HHHHHHHHHHHHHHCCCCEEEECCCCCCCSSTHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred -cCCeEEEEeCCCCCH-------HHHHHHHHHHHHHcCCCCEEEECCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence 136789999999953 3233443 379999999998653 3567888999999999999987542
Q ss_pred ----cCCceEEEEecceeecCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCC
Q 010075 152 ----VKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGW 227 (519)
Q Consensus 152 ----~~l~~~V~vSTa~v~~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~ 227 (519)
+.-.++|++||........ .+ . ..
T Consensus 144 ~~~~~~~g~iv~isS~~~~~~~~-----------~~-~----------------------------------------~~ 171 (278)
T 3sx2_A 144 LVKQGTGGSIVLISSSAGLAGVG-----------SA-D----------------------------------------PG 171 (278)
T ss_dssp HHHHCSCEEEEEECCGGGTSCCC-----------CS-S----------------------------------------HH
T ss_pred HHhCCCCcEEEEEccHHhcCCCc-----------cC-C----------------------------------------CC
Confidence 1246899999986543210 00 0 11
Q ss_pred CcHHHHHHHHHHHHHHHh-----hcCCcEEEEecCccccCCCCCCCcccccccccHHHHHH-hhcCCceeeccCCCceee
Q 010075 228 PNTYVFTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVA-SAQGNLRCLVGETKVIMD 301 (519)
Q Consensus 228 ~n~Y~~sK~~aE~lv~~~-----~~~lp~~IvRPs~V~g~~~~p~~gw~~~~~~~~~~i~~-~~~g~~~~~~~~~~~~~d 301 (519)
...|+.||+..+.+.+.+ ..++++..++||.|.++..... .....+.. ..........++... ..
T Consensus 172 ~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~p-~~ 242 (278)
T 3sx2_A 172 SVGYVAAKHGVVGLMRVYANLLAGQMIRVNSIHPSGVETPMINNE--------FTREWLAKMAAATDTPGAMGNAMP-VE 242 (278)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCBSSTTTSSH--------HHHHHHHHHHHHCC--CTTSCSSS-CS
T ss_pred chHhHHHHHHHHHHHHHHHHHHhccCcEEEEEecCCccCccchhh--------hHHHHHhhccchhhhhhhhhhhcC-cC
Confidence 246999999999888765 3579999999999988754210 00011110 111111111222223 56
Q ss_pred eeeHHHHHHHHHHHHHHhccCCCCCcEEEecCCC
Q 010075 302 VIPVDMVVNAMIVAMVAHAKQPSDANIYHVGSSL 335 (519)
Q Consensus 302 ~vpVDdva~aii~a~~~~~~~~~~~~iyni~s~~ 335 (519)
++.++|+|++++.++..... .-.++++++.+|.
T Consensus 243 ~~~p~dvA~~v~~l~s~~~~-~itG~~i~vdGG~ 275 (278)
T 3sx2_A 243 VLAPEDVANAVAWLVSDQAR-YITGVTLPVDAGF 275 (278)
T ss_dssp SBCHHHHHHHHHHHTSGGGT-TCCSCEEEESTTT
T ss_pred cCCHHHHHHHHHHHhCcccc-cccCCEEeECCCc
Confidence 88999999999998864332 2247899998874
|
| >3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.79 E-value=7.3e-18 Score=165.41 Aligned_cols=225 Identities=14% Similarity=0.047 Sum_probs=154.8
Q ss_pred cCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 010075 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (519)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (519)
++||+|+||||+|+||++++++|++.| .+|+++.|+... .+.+.++ +++. ...++.+
T Consensus 8 l~~k~vlVTGas~gIG~aia~~l~~~G---~~V~~~~r~~~~---~~~~~~~---------l~~~--------~~~~~~~ 64 (262)
T 3pk0_A 8 LQGRSVVVTGGTKGIGRGIATVFARAG---ANVAVAGRSTAD---IDACVAD---------LDQL--------GSGKVIG 64 (262)
T ss_dssp CTTCEEEETTCSSHHHHHHHHHHHHTT---CEEEEEESCHHH---HHHHHHH---------HHTT--------SSSCEEE
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCC---CEEEEEeCCHHH---HHHHHHH---------HHhh--------CCCcEEE
Confidence 678999999999999999999999998 678898886422 1221111 1111 1257899
Q ss_pred EeccCCCCCCCCChhhhHHHHh-------cCccEEEEcCccCCc-------cccHHHHHHHhHHHHHHHHHHHHhc---c
Q 010075 90 VPGDISSEDLGLKDSNLKEELW-------NELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKC---V 152 (519)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~-------~~vdiViH~Aa~v~f-------~~~~~~~~~~Nv~gt~~ll~~a~~~---~ 152 (519)
+.+|++++ +..+.++ .++|++||+||.... .+.++..+++|+.|+.++++.+.+. .
T Consensus 65 ~~~Dv~~~-------~~v~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~ 137 (262)
T 3pk0_A 65 VQTDVSDR-------AQCDALAGRAVEEFGGIDVVCANAGVFPDAPLATMTPEQLNGIFAVNVNGTFYAVQACLDALIAS 137 (262)
T ss_dssp EECCTTSH-------HHHHHHHHHHHHHHSCCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH
T ss_pred EEcCCCCH-------HHHHHHHHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc
Confidence 99999953 3233333 379999999997532 2567888999999999998887653 2
Q ss_pred CCceEEEEecceeecCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcHHH
Q 010075 153 KLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYV 232 (519)
Q Consensus 153 ~l~~~V~vSTa~v~~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~Y~ 232 (519)
+..++|++||....... . .....|+
T Consensus 138 ~~g~iv~isS~~~~~~~--------~-----------------------------------------------~~~~~Y~ 162 (262)
T 3pk0_A 138 GSGRVVLTSSITGPITG--------Y-----------------------------------------------PGWSHYG 162 (262)
T ss_dssp SSCEEEEECCSBTTTBC--------C-----------------------------------------------TTCHHHH
T ss_pred CCcEEEEEechhhccCC--------C-----------------------------------------------CCChhhH
Confidence 56799999997532100 0 2245799
Q ss_pred HHHHHHHHHHHHh-----hcCCcEEEEecCccccCCCCCCCcccccccccHHHHHHhhcCCceeeccCCCceeeeeeHHH
Q 010075 233 FTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDM 307 (519)
Q Consensus 233 ~sK~~aE~lv~~~-----~~~lp~~IvRPs~V~g~~~~p~~gw~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~d~vpVDd 307 (519)
.||+..+.+.+.. ..++++..++||.|.++..... ............ ....+...+|
T Consensus 163 asK~a~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~---------~~~~~~~~~~~~---------p~~r~~~p~d 224 (262)
T 3pk0_A 163 ATKAAQLGFMRTAAIELAPHKITVNAIMPGNIMTEGLLEN---------GEEYIASMARSI---------PAGALGTPED 224 (262)
T ss_dssp HHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCHHHHTT---------CHHHHHHHHTTS---------TTSSCBCHHH
T ss_pred HHHHHHHHHHHHHHHHHHhhCcEEEEEEeCcCcCcccccc---------CHHHHHHHHhcC---------CCCCCcCHHH
Confidence 9999999998865 3589999999999987643111 111222222221 1123678899
Q ss_pred HHHHHHHHHHHhccCCCCCcEEEecCCCCCc
Q 010075 308 VVNAMIVAMVAHAKQPSDANIYHVGSSLRNP 338 (519)
Q Consensus 308 va~aii~a~~~~~~~~~~~~iyni~s~~~~~ 338 (519)
+|++++.++..... .-.++++++.+|...+
T Consensus 225 va~~v~~L~s~~~~-~itG~~i~vdGG~~~~ 254 (262)
T 3pk0_A 225 IGHLAAFLATKEAG-YITGQAIAVDGGQVLP 254 (262)
T ss_dssp HHHHHHHHHSGGGT-TCCSCEEEESTTTTCC
T ss_pred HHHHHHHHhCcccc-CCcCCEEEECCCeecC
Confidence 99999998864332 2247899999886543
|
| >2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix} | Back alignment and structure |
|---|
Probab=99.79 E-value=5.1e-18 Score=166.16 Aligned_cols=230 Identities=10% Similarity=0.059 Sum_probs=147.7
Q ss_pred cCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 010075 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (519)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (519)
+++|+|+||||||+||++++++|++.| .+|+++.|+... .+.+.+ .+....+ ..++.+
T Consensus 5 l~~k~vlVTGas~gIG~~ia~~l~~~G---~~V~~~~r~~~~---~~~~~~---------~~~~~~~-------~~~~~~ 62 (260)
T 2z1n_A 5 IQGKLAVVTAGSSGLGFASALELARNG---ARLLLFSRNREK---LEAAAS---------RIASLVS-------GAQVDI 62 (260)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTT---CEEEEEESCHHH---HHHHHH---------HHHHHST-------TCCEEE
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCC---CEEEEEeCCHHH---HHHHHH---------HHHhcCC-------CCeEEE
Confidence 578999999999999999999999998 678999886421 122111 1111100 126889
Q ss_pred EeccCCCCCCCCChhhhHHHHhc------CccEEEEcCccCCc-------cccHHHHHHHhHHHHHHHHHHHHhc---cC
Q 010075 90 VPGDISSEDLGLKDSNLKEELWN------ELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKC---VK 153 (519)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~~------~vdiViH~Aa~v~f-------~~~~~~~~~~Nv~gt~~ll~~a~~~---~~ 153 (519)
+.+|+++ .+..+.+++ ++|+|||+||.... .+.++..+++|+.|+.++.+.+.+. .+
T Consensus 63 ~~~D~~~-------~~~v~~~~~~~~~~~gid~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~ 135 (260)
T 2z1n_A 63 VAGDIRE-------PGDIDRLFEKARDLGGADILVYSTGGPRPGRFMELGVEDWDESYRLLARSAVWVGRRAAEQMVEKG 135 (260)
T ss_dssp EECCTTC-------HHHHHHHHHHHHHTTCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHTHHHHHHHHHHHHHHHHHHT
T ss_pred EEccCCC-------HHHHHHHHHHHHHhcCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC
Confidence 9999995 332334443 49999999996532 2467888999999997776665421 25
Q ss_pred CceEEEEecceeecCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcHHHH
Q 010075 154 LKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVF 233 (519)
Q Consensus 154 l~~~V~vSTa~v~~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~Y~~ 233 (519)
..++|++||...+... .....|+.
T Consensus 136 ~g~iv~isS~~~~~~~--------------------------------------------------------~~~~~Y~~ 159 (260)
T 2z1n_A 136 WGRMVYIGSVTLLRPW--------------------------------------------------------QDLALSNI 159 (260)
T ss_dssp CEEEEEECCGGGTSCC--------------------------------------------------------TTBHHHHH
T ss_pred CcEEEEECchhhcCCC--------------------------------------------------------CCCchhHH
Confidence 6899999998665321 12357999
Q ss_pred HHHHHHHHHHHh-----hcCCcEEEEecCccccCCCCCCC-cccccccccHHH-HHHhhcCCceeeccCCCceeeeeeHH
Q 010075 234 TKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFP-GWVEDLKTINTL-FVASAQGNLRCLVGETKVIMDVIPVD 306 (519)
Q Consensus 234 sK~~aE~lv~~~-----~~~lp~~IvRPs~V~g~~~~p~~-gw~~~~~~~~~~-i~~~~~g~~~~~~~~~~~~~d~vpVD 306 (519)
||+..+.+.+.. ..++++.+++||.|.++...... ............ .... ........+..++
T Consensus 160 sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~p~~r~~~~~ 230 (260)
T 2z1n_A 160 MRLPVIGVVRTLALELAPHGVTVNAVLPSLILTDRVRSLAEERARRSGITVEEALKSM---------ASRIPMGRVGKPE 230 (260)
T ss_dssp HTHHHHHHHHHHHHHHGGGTEEEEEEEECHHHHCCCC--------------------------------CCTTSSCCCHH
T ss_pred HHHHHHHHHHHHHHHHhhhCeEEEEEEECCcccchhhhhhhhhhcccCCcHHHHHHHH---------HhcCCCCCccCHH
Confidence 999999888754 34799999999999987542100 000000000000 0000 0011123467899
Q ss_pred HHHHHHHHHHHHhccCCCCCcEEEecCC
Q 010075 307 MVVNAMIVAMVAHAKQPSDANIYHVGSS 334 (519)
Q Consensus 307 dva~aii~a~~~~~~~~~~~~iyni~s~ 334 (519)
|+|++++.++..... .-.++++++.+|
T Consensus 231 dva~~v~~l~s~~~~-~~tG~~i~vdGG 257 (260)
T 2z1n_A 231 ELASVVAFLASEKAS-FITGAVIPVDGG 257 (260)
T ss_dssp HHHHHHHHHTSGGGT-TCCSCEEEESTT
T ss_pred HHHHHHHHHhCcccc-CCCCCEEEeCCC
Confidence 999999998864322 224688999877
|
| >4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli} | Back alignment and structure |
|---|
Probab=99.78 E-value=4.7e-18 Score=167.60 Aligned_cols=223 Identities=17% Similarity=0.154 Sum_probs=143.7
Q ss_pred hcCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceE
Q 010075 9 FLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKIT 88 (519)
Q Consensus 9 ~~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~ 88 (519)
..++|+|+||||+|+||++++++|++.| .+|+++.+... ...+.+.+++ .+ ...++.
T Consensus 23 m~~~k~vlITGas~gIG~a~a~~l~~~G---~~V~~~~~~~~--~~~~~~~~~~---------~~---------~~~~~~ 79 (272)
T 4e3z_A 23 MSDTPVVLVTGGSRGIGAAVCRLAARQG---WRVGVNYAANR--EAADAVVAAI---------TE---------SGGEAV 79 (272)
T ss_dssp -CCSCEEEETTTTSHHHHHHHHHHHHTT---CEEEEEESSCH--HHHHHHHHHH---------HH---------TTCEEE
T ss_pred ccCCCEEEEECCCchHHHHHHHHHHHCC---CEEEEEcCCCh--hHHHHHHHHH---------Hh---------cCCcEE
Confidence 3467899999999999999999999998 56666633321 1122222111 11 125789
Q ss_pred EEeccCCCCCCCCChhhhHHHHh-------cCccEEEEcCccCCc--------cccHHHHHHHhHHHHHHHHHHHHhc--
Q 010075 89 FVPGDISSEDLGLKDSNLKEELW-------NELDIMVNSAAITKF--------DERYDVAFGINTLGVIHLVNFAKKC-- 151 (519)
Q Consensus 89 ~v~gDl~~~~lgls~~~~~~~l~-------~~vdiViH~Aa~v~f--------~~~~~~~~~~Nv~gt~~ll~~a~~~-- 151 (519)
++.+|++++ +..+.++ .++|+|||+||.... .+.++..+++|+.|+..+++.+.+.
T Consensus 80 ~~~~Dl~~~-------~~v~~~~~~~~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~ 152 (272)
T 4e3z_A 80 AIPGDVGNA-------ADIAAMFSAVDRQFGRLDGLVNNAGIVDYPQRVDEMSVERIERMLRVNVTGSILCAAEAVRRMS 152 (272)
T ss_dssp EEECCTTCH-------HHHHHHHHHHHHHHSCCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHC
T ss_pred EEEcCCCCH-------HHHHHHHHHHHHhCCCCCEEEECCCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHH
Confidence 999999963 2223333 379999999997643 2457788999999999999887653
Q ss_pred ----cCCceEEEEecceeecCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCC
Q 010075 152 ----VKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGW 227 (519)
Q Consensus 152 ----~~l~~~V~vSTa~v~~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~ 227 (519)
++..++|++||........ ..
T Consensus 153 ~~~~~~~g~iv~isS~~~~~~~~-------------------------------------------------------~~ 177 (272)
T 4e3z_A 153 RLYSGQGGAIVNVSSMAAILGSA-------------------------------------------------------TQ 177 (272)
T ss_dssp GGGTCCCEEEEEECCTHHHHCCT-------------------------------------------------------TT
T ss_pred HhccCCCCEEEEEcchHhccCCC-------------------------------------------------------CC
Confidence 1346899999976543210 12
Q ss_pred CcHHHHHHHHHHHHHHHh-----hcCCcEEEEecCccccCCCCCCCcccccccccHHHHHHhhcCCceeeccCCCceeee
Q 010075 228 PNTYVFTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDV 302 (519)
Q Consensus 228 ~n~Y~~sK~~aE~lv~~~-----~~~lp~~IvRPs~V~g~~~~p~~gw~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~d~ 302 (519)
...|+.||+..|.+++.+ ..++++..++||.|.++..... .......... .......+
T Consensus 178 ~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~--------~~~~~~~~~~---------~~~~~~~~ 240 (272)
T 4e3z_A 178 YVDYAASKAAIDTFTIGLAREVAAEGIRVNAVRPGIIETDLHASG--------GLPDRAREMA---------PSVPMQRA 240 (272)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBC-----------------------------------CCTTSSC
T ss_pred cchhHHHHHHHHHHHHHHHHHHHHcCcEEEEEecCCCcCCccccc--------CChHHHHHHh---------hcCCcCCC
Confidence 346999999999988754 3489999999999988754210 0000111111 11122335
Q ss_pred eeHHHHHHHHHHHHHHhccCCCCCcEEEecCC
Q 010075 303 IPVDMVVNAMIVAMVAHAKQPSDANIYHVGSS 334 (519)
Q Consensus 303 vpVDdva~aii~a~~~~~~~~~~~~iyni~s~ 334 (519)
..++|+|++++.++..... .-.+++|++.+|
T Consensus 241 ~~~edvA~~i~~l~s~~~~-~~tG~~i~vdgG 271 (272)
T 4e3z_A 241 GMPEEVADAILYLLSPSAS-YVTGSILNVSGG 271 (272)
T ss_dssp BCHHHHHHHHHHHHSGGGT-TCCSCEEEESTT
T ss_pred cCHHHHHHHHHHHhCCccc-cccCCEEeecCC
Confidence 6799999999998864332 224789999876
|
| >1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain dehydrogenase, ketone BODY, beta hydroxybutyrate, oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi} SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A* 2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A* | Back alignment and structure |
|---|
Probab=99.78 E-value=5.8e-18 Score=165.77 Aligned_cols=230 Identities=16% Similarity=0.148 Sum_probs=148.2
Q ss_pred cCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 010075 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (519)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (519)
++||+|+||||+|+||+++++.|++.| .+|+++.|+... ..+.+.++ +.+.. ..++.+
T Consensus 2 l~~k~vlVTGas~gIG~~ia~~l~~~G---~~V~~~~r~~~~--~~~~~~~~---------~~~~~--------~~~~~~ 59 (260)
T 1x1t_A 2 LKGKVAVVTGSTSGIGLGIATALAAQG---ADIVLNGFGDAA--EIEKVRAG---------LAAQH--------GVKVLY 59 (260)
T ss_dssp CTTCEEEETTCSSHHHHHHHHHHHHTT---CEEEEECCSCHH--HHHHHHHH---------HHHHH--------TSCEEE
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHcC---CEEEEEeCCcch--HHHHHHHH---------HHhcc--------CCcEEE
Confidence 568999999999999999999999998 678888887532 01222211 11111 146889
Q ss_pred EeccCCCCCCCCChhhhHHHHh-------cCccEEEEcCccCCc-------cccHHHHHHHhHHHHHHHHHHHHhc---c
Q 010075 90 VPGDISSEDLGLKDSNLKEELW-------NELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKC---V 152 (519)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~-------~~vdiViH~Aa~v~f-------~~~~~~~~~~Nv~gt~~ll~~a~~~---~ 152 (519)
+.+|++++ +..+.++ .++|++||+||.... .+.++..+++|+.|+.++++.+.+. .
T Consensus 60 ~~~D~~~~-------~~v~~~~~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~ 132 (260)
T 1x1t_A 60 DGADLSKG-------EAVRGLVDNAVRQMGRIDILVNNAGIQHTALIEDFPTEKWDAILALNLSAVFHGTAAALPHMKKQ 132 (260)
T ss_dssp ECCCTTSH-------HHHHHHHHHHHHHHSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH
T ss_pred EECCCCCH-------HHHHHHHHHHHHhcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 99999953 3233333 379999999997542 2467888999999999998887532 2
Q ss_pred CCceEEEEecceeecCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcHHH
Q 010075 153 KLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYV 232 (519)
Q Consensus 153 ~l~~~V~vSTa~v~~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~Y~ 232 (519)
+..++|++||...+... .....|+
T Consensus 133 ~~g~iv~isS~~~~~~~--------------------------------------------------------~~~~~Y~ 156 (260)
T 1x1t_A 133 GFGRIINIASAHGLVAS--------------------------------------------------------ANKSAYV 156 (260)
T ss_dssp TCEEEEEECCGGGTSCC--------------------------------------------------------TTCHHHH
T ss_pred CCCEEEEECcHHhCcCC--------------------------------------------------------CCCchHH
Confidence 56799999998654311 1245799
Q ss_pred HHHHHHHHHHHHh-----hcCCcEEEEecCccccCCCCCC-Cccccccccc--HHHHHHhhcCCceeeccCCCceeeeee
Q 010075 233 FTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPF-PGWVEDLKTI--NTLFVASAQGNLRCLVGETKVIMDVIP 304 (519)
Q Consensus 233 ~sK~~aE~lv~~~-----~~~lp~~IvRPs~V~g~~~~p~-~gw~~~~~~~--~~~i~~~~~g~~~~~~~~~~~~~d~vp 304 (519)
.||+..|.+.+.. ..++++.+++||.|.++..... +.+... .+. ....... .........+..
T Consensus 157 ~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~-~~~~~~~~~~~~--------~~~~~p~~~~~~ 227 (260)
T 1x1t_A 157 AAKHGVVGFTKVTALETAGQGITANAICPGWVRTPLVEKQISALAEK-NGVDQETAAREL--------LSEKQPSLQFVT 227 (260)
T ss_dssp HHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCC-------------------------C--------HHHHCTTCCCBC
T ss_pred HHHHHHHHHHHHHHHHhccCCEEEEEEeecCccCchHHHhhhhhccc-cCCchHHHHHHH--------hhccCCCCCCcC
Confidence 9999999888754 3479999999999988753221 100000 000 0000000 000011235789
Q ss_pred HHHHHHHHHHHHHHhccCCCCCcEEEecCC
Q 010075 305 VDMVVNAMIVAMVAHAKQPSDANIYHVGSS 334 (519)
Q Consensus 305 VDdva~aii~a~~~~~~~~~~~~iyni~s~ 334 (519)
++|+|++++.++.... ..-.++++++.+|
T Consensus 228 p~dva~~~~~l~s~~~-~~~tG~~~~vdgG 256 (260)
T 1x1t_A 228 PEQLGGTAVFLASDAA-AQITGTTVSVDGG 256 (260)
T ss_dssp HHHHHHHHHHHHSGGG-TTCCSCEEEESTT
T ss_pred HHHHHHHHHHHhChhh-cCCCCCEEEECCC
Confidence 9999999999886432 2224789999887
|
| >2fwm_X 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; enterobactin, rossman fold, chorismate metabolism, short-CHA oxidoreductase, tetramer; 2.00A {Escherichia coli} | Back alignment and structure |
|---|
Probab=99.78 E-value=1.3e-17 Score=162.27 Aligned_cols=220 Identities=13% Similarity=0.102 Sum_probs=141.5
Q ss_pred cCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 010075 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (519)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (519)
+++|+|+||||||+||+++++.|++.| .+|+++.|+.... ...+.+
T Consensus 5 l~~k~vlVTGas~giG~~ia~~l~~~G---~~V~~~~r~~~~~-------------------------------~~~~~~ 50 (250)
T 2fwm_X 5 FSGKNVWVTGAGKGIGYATALAFVEAG---AKVTGFDQAFTQE-------------------------------QYPFAT 50 (250)
T ss_dssp CTTCEEEEESTTSHHHHHHHHHHHHTT---CEEEEEESCCCSS-------------------------------CCSSEE
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCC---CEEEEEeCchhhh-------------------------------cCCceE
Confidence 568999999999999999999999998 6789999875311 012678
Q ss_pred EeccCCCCCCCCChhhhHHHHh-------cCccEEEEcCccCCc-------cccHHHHHHHhHHHHHHHHHHHHhc---c
Q 010075 90 VPGDISSEDLGLKDSNLKEELW-------NELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKC---V 152 (519)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~-------~~vdiViH~Aa~v~f-------~~~~~~~~~~Nv~gt~~ll~~a~~~---~ 152 (519)
+.+|+++ .+..+.++ .++|+|||+||.... .+.++..+++|+.|+.++++.+.+. .
T Consensus 51 ~~~D~~d-------~~~~~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~ 123 (250)
T 2fwm_X 51 EVMDVAD-------AAQVAQVCQRLLAETERLDALVNAAGILRMGATDQLSKEDWQQTFAVNVGGAFNLFQQTMNQFRRQ 123 (250)
T ss_dssp EECCTTC-------HHHHHHHHHHHHHHCSCCCEEEECCCCCCCCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH
T ss_pred EEcCCCC-------HHHHHHHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhc
Confidence 8999995 33233443 379999999997542 2567888999999999999887321 2
Q ss_pred CCceEEEEecceeecCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcHHH
Q 010075 153 KLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYV 232 (519)
Q Consensus 153 ~l~~~V~vSTa~v~~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~Y~ 232 (519)
+..++|++||...+... .....|+
T Consensus 124 ~~g~iv~isS~~~~~~~--------------------------------------------------------~~~~~Y~ 147 (250)
T 2fwm_X 124 RGGAIVTVASDAAHTPR--------------------------------------------------------IGMSAYG 147 (250)
T ss_dssp TCCEEEEECCGGGTSCC--------------------------------------------------------TTCHHHH
T ss_pred CCCEEEEECchhhCCCC--------------------------------------------------------CCCchHH
Confidence 56799999998654311 2245799
Q ss_pred HHHHHHHHHHHHh-----hcCCcEEEEecCccccCCCCCCCcccccccccHHHHHHhhcCCceeeccCCCceeeeeeHHH
Q 010075 233 FTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDM 307 (519)
Q Consensus 233 ~sK~~aE~lv~~~-----~~~lp~~IvRPs~V~g~~~~p~~gw~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~d~vpVDd 307 (519)
.||+..|.+.+.. ..++++.+++||.|.++....... .. ......+...... .........+...+|
T Consensus 148 ~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~--~~-~~~~~~~~~~~~~-----~~~~~p~~~~~~p~d 219 (250)
T 2fwm_X 148 ASKAALKSLALSVGLELAGSGVRCNVVSPGSTDTDMQRTLWV--SD-DAEEQRIRGFGEQ-----FKLGIPLGKIARPQE 219 (250)
T ss_dssp HHHHHHHHHHHHHHHHHGGGTCEEEEEEECCC--------------------------------------------CHHH
T ss_pred HHHHHHHHHHHHHHHHhCccCCEEEEEECCcccCcccccccc--Ch-hHHHHHHhhhhhc-----ccccCCCCCCcCHHH
Confidence 9999999988765 348999999999998875421100 00 0000000000000 000111224688999
Q ss_pred HHHHHHHHHHHhccCCCCCcEEEecCCC
Q 010075 308 VVNAMIVAMVAHAKQPSDANIYHVGSSL 335 (519)
Q Consensus 308 va~aii~a~~~~~~~~~~~~iyni~s~~ 335 (519)
+|++++.++..... .-.++++++.+|.
T Consensus 220 vA~~v~~l~s~~~~-~~tG~~i~vdGG~ 246 (250)
T 2fwm_X 220 IANTILFLASDLAS-HITLQDIVVDGGS 246 (250)
T ss_dssp HHHHHHHHHSGGGT-TCCSCEEEESTTT
T ss_pred HHHHHHHHhCcccc-CCCCCEEEECCCc
Confidence 99999998864322 2237889998874
|
| >3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A* | Back alignment and structure |
|---|
Probab=99.78 E-value=5.9e-18 Score=168.72 Aligned_cols=223 Identities=15% Similarity=0.139 Sum_probs=154.5
Q ss_pred cCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 010075 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (519)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (519)
++||+|+||||+|+||++++++|++.| .+|+++.|+.... .+.+.+. .++ ...++.+
T Consensus 45 l~gk~vlVTGas~GIG~aia~~la~~G---~~V~~~~r~~~~~--~~~~~~~----------~~~--------~~~~~~~ 101 (291)
T 3ijr_A 45 LKGKNVLITGGDSGIGRAVSIAFAKEG---ANIAIAYLDEEGD--ANETKQY----------VEK--------EGVKCVL 101 (291)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHTT---CEEEEEESSCHHH--HHHHHHH----------HHT--------TTCCEEE
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCC---CEEEEEeCCchHH--HHHHHHH----------HHh--------cCCcEEE
Confidence 578999999999999999999999998 6788888875321 1111110 011 1357899
Q ss_pred EeccCCCCCCCCChhhhHHHHh-------cCccEEEEcCccCCc--------cccHHHHHHHhHHHHHHHHHHHHhc-cC
Q 010075 90 VPGDISSEDLGLKDSNLKEELW-------NELDIMVNSAAITKF--------DERYDVAFGINTLGVIHLVNFAKKC-VK 153 (519)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~-------~~vdiViH~Aa~v~f--------~~~~~~~~~~Nv~gt~~ll~~a~~~-~~ 153 (519)
+.+|++++ +..+.++ .++|++||+||.... .+.++..+++|+.|+.++++.+... .+
T Consensus 102 ~~~Dv~d~-------~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~ 174 (291)
T 3ijr_A 102 LPGDLSDE-------QHCKDIVQETVRQLGSLNILVNNVAQQYPQQGLEYITAEQLEKTFRINIFSYFHVTKAALSHLKQ 174 (291)
T ss_dssp EESCTTSH-------HHHHHHHHHHHHHHSSCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCCT
T ss_pred EECCCCCH-------HHHHHHHHHHHHHcCCCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhh
Confidence 99999953 3223333 379999999997531 2567888999999999999998763 34
Q ss_pred CceEEEEecceeecCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcHHHH
Q 010075 154 LKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVF 233 (519)
Q Consensus 154 l~~~V~vSTa~v~~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~Y~~ 233 (519)
..++|++||...+... .....|+.
T Consensus 175 ~g~iv~isS~~~~~~~--------------------------------------------------------~~~~~Y~a 198 (291)
T 3ijr_A 175 GDVIINTASIVAYEGN--------------------------------------------------------ETLIDYSA 198 (291)
T ss_dssp TCEEEEECCTHHHHCC--------------------------------------------------------TTCHHHHH
T ss_pred CCEEEEEechHhcCCC--------------------------------------------------------CCChhHHH
Confidence 4589999998665321 12357999
Q ss_pred HHHHHHHHHHHh-----hcCCcEEEEecCccccCCCCCCCcccccccccHHHHHHhhcCCceeeccCCCceeeeeeHHHH
Q 010075 234 TKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMV 308 (519)
Q Consensus 234 sK~~aE~lv~~~-----~~~lp~~IvRPs~V~g~~~~p~~gw~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~d~vpVDdv 308 (519)
||+..|.+.+.. ..++++..++||.|.++.... . ......... ........+..++|+
T Consensus 199 sKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~------~--~~~~~~~~~---------~~~~p~~r~~~p~dv 261 (291)
T 3ijr_A 199 TKGAIVAFTRSLSQSLVQKGIRVNGVAPGPIWTPLIPS------S--FDEKKVSQF---------GSNVPMQRPGQPYEL 261 (291)
T ss_dssp HHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSTHHHH------H--SCHHHHHHT---------TTTSTTSSCBCGGGT
T ss_pred HHHHHHHHHHHHHHHHhhcCEEEEEEeeCCCcCCcccc------c--CCHHHHHHH---------HccCCCCCCcCHHHH
Confidence 999999888765 348999999999998764210 0 001111111 122233456789999
Q ss_pred HHHHHHHHHHhccCCCCCcEEEecCCCC
Q 010075 309 VNAMIVAMVAHAKQPSDANIYHVGSSLR 336 (519)
Q Consensus 309 a~aii~a~~~~~~~~~~~~iyni~s~~~ 336 (519)
|++++.++..... .-.++++++.+|..
T Consensus 262 A~~v~~L~s~~~~-~itG~~i~vdGG~~ 288 (291)
T 3ijr_A 262 APAYVYLASSDSS-YVTGQMIHVNGGVI 288 (291)
T ss_dssp HHHHHHHHSGGGT-TCCSCEEEESSSCC
T ss_pred HHHHHHHhCCccC-CCcCCEEEECCCcc
Confidence 9999998864332 22478999988743
|
| >1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A* | Back alignment and structure |
|---|
Probab=99.78 E-value=7.8e-18 Score=164.42 Aligned_cols=216 Identities=13% Similarity=0.062 Sum_probs=146.6
Q ss_pred cCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 010075 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (519)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (519)
+++|+|+||||||+||++++++|++.| .+|+++.|+... .+.+. ++. ..++.+
T Consensus 3 l~~k~vlVTGas~gIG~~ia~~l~~~G---~~V~~~~r~~~~---~~~~~-------------~~~--------~~~~~~ 55 (254)
T 1hdc_A 3 LSGKTVIITGGARGLGAEAARQAVAAG---ARVVLADVLDEE---GAATA-------------REL--------GDAARY 55 (254)
T ss_dssp CCCSEEEEETTTSHHHHHHHHHHHHTT---CEEEEEESCHHH---HHHHH-------------HTT--------GGGEEE
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCC---CEEEEEeCCHHH---HHHHH-------------HHh--------CCceeE
Confidence 578999999999999999999999998 678898886421 11111 111 246788
Q ss_pred EeccCCCCCCCCChhhhHHHHhc-------CccEEEEcCccCCc-------cccHHHHHHHhHHHHHHHHHH----HHhc
Q 010075 90 VPGDISSEDLGLKDSNLKEELWN-------ELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNF----AKKC 151 (519)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~~-------~vdiViH~Aa~v~f-------~~~~~~~~~~Nv~gt~~ll~~----a~~~ 151 (519)
+.+|++++ +..+.+++ ++|++||+||.... .+.++..+++|+.|+..+.+. +++.
T Consensus 56 ~~~D~~~~-------~~~~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~ 128 (254)
T 1hdc_A 56 QHLDVTIE-------EDWQRVVAYAREEFGSVDGLVNNAGISTGMFLETESVERFRKVVEINLTGVFIGMKTVIPAMKDA 128 (254)
T ss_dssp EECCTTCH-------HHHHHHHHHHHHHHSCCCEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH
T ss_pred EEecCCCH-------HHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc
Confidence 99999953 32334433 79999999997542 246788899999999865554 4442
Q ss_pred cCCceEEEEecceeecCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcHH
Q 010075 152 VKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTY 231 (519)
Q Consensus 152 ~~l~~~V~vSTa~v~~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~Y 231 (519)
+..++|++||...+... .....|
T Consensus 129 -~~g~iv~isS~~~~~~~--------------------------------------------------------~~~~~Y 151 (254)
T 1hdc_A 129 -GGGSIVNISSAAGLMGL--------------------------------------------------------ALTSSY 151 (254)
T ss_dssp -TCEEEEEECCGGGTSCC--------------------------------------------------------TTCHHH
T ss_pred -CCCEEEEECchhhccCC--------------------------------------------------------CCchhH
Confidence 56899999998654321 123579
Q ss_pred HHHHHHHHHHHHHh-----hcCCcEEEEecCccccCCCCCCCcccccccccHHHHHHhhcCCceeeccCCCceeeee-eH
Q 010075 232 VFTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVI-PV 305 (519)
Q Consensus 232 ~~sK~~aE~lv~~~-----~~~lp~~IvRPs~V~g~~~~p~~gw~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~d~v-pV 305 (519)
+.||+..+.+.+.. ..++++.++|||.|.++.....+ . .....+ ........+. +.
T Consensus 152 ~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~---~--------------~~~~~~-~~~~p~~~~~~~~ 213 (254)
T 1hdc_A 152 GASKWGVRGLSKLAAVELGTDRIRVNSVHPGMTYTPMTAETG---I--------------RQGEGN-YPNTPMGRVGNEP 213 (254)
T ss_dssp HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHT---C--------------CCSTTS-CTTSTTSSCB-CH
T ss_pred HHHHHHHHHHHHHHHHHhhhcCeEEEEEecccCcCccccccc---h--------------hHHHHH-HhcCCCCCCCCCH
Confidence 99999999888765 35799999999999876321100 0 000000 0001112356 89
Q ss_pred HHHHHHHHHHHHHhccCCCCCcEEEecCCC
Q 010075 306 DMVVNAMIVAMVAHAKQPSDANIYHVGSSL 335 (519)
Q Consensus 306 Ddva~aii~a~~~~~~~~~~~~iyni~s~~ 335 (519)
+|+|++++.++..... .-.++++++.+|.
T Consensus 214 ~dvA~~v~~l~s~~~~-~~tG~~~~vdgG~ 242 (254)
T 1hdc_A 214 GEIAGAVVKLLSDTSS-YVTGAELAVDGGW 242 (254)
T ss_dssp HHHHHHHHHHHSGGGT-TCCSCEEEESTTT
T ss_pred HHHHHHHHHHhCchhc-CCCCCEEEECCCc
Confidence 9999999998864322 2237899998874
|
| >2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A* | Back alignment and structure |
|---|
Probab=99.78 E-value=4.5e-18 Score=168.33 Aligned_cols=229 Identities=14% Similarity=0.102 Sum_probs=150.6
Q ss_pred cCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 010075 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (519)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (519)
+++|+|+||||||+||+++++.|++.| .+|+++.|+... .+.+.+ .+++. ..++.+
T Consensus 20 l~~k~vlVTGas~gIG~~ia~~l~~~G---~~V~~~~r~~~~---~~~~~~---------~l~~~---------~~~~~~ 75 (277)
T 2rhc_B 20 QDSEVALVTGATSGIGLEIARRLGKEG---LRVFVCARGEEG---LRTTLK---------ELREA---------GVEADG 75 (277)
T ss_dssp TTSCEEEEETCSSHHHHHHHHHHHHTT---CEEEEEESCHHH---HHHHHH---------HHHHT---------TCCEEE
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCC---CEEEEEeCCHHH---HHHHHH---------HHHhc---------CCceEE
Confidence 578999999999999999999999998 678999887421 111111 11111 246889
Q ss_pred EeccCCCCCCCCChhhhHHHHh-------cCccEEEEcCccCCc-------cccHHHHHHHhHHHHHHHHHHHHhc----
Q 010075 90 VPGDISSEDLGLKDSNLKEELW-------NELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKC---- 151 (519)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~-------~~vdiViH~Aa~v~f-------~~~~~~~~~~Nv~gt~~ll~~a~~~---- 151 (519)
+.+|++++ +..+.++ .++|+|||+||.... .+.++..+++|+.|+.++++.+.+.
T Consensus 76 ~~~Dv~~~-------~~v~~~~~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~m~ 148 (277)
T 2rhc_B 76 RTCDVRSV-------PEIEALVAAVVERYGPVDVLVNNAGRPGGGATAELADELWLDVVETNLTGVFRVTKQVLKAGGML 148 (277)
T ss_dssp EECCTTCH-------HHHHHHHHHHHHHTCSCSEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTTCHH
T ss_pred EECCCCCH-------HHHHHHHHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHhChhhHh
Confidence 99999963 2223333 379999999997532 2457788999999999999987653
Q ss_pred -cCCceEEEEecceeecCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcH
Q 010075 152 -VKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNT 230 (519)
Q Consensus 152 -~~l~~~V~vSTa~v~~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~ 230 (519)
.+..++|++||....... .....
T Consensus 149 ~~~~g~iv~isS~~~~~~~--------------------------------------------------------~~~~~ 172 (277)
T 2rhc_B 149 ERGTGRIVNIASTGGKQGV--------------------------------------------------------VHAAP 172 (277)
T ss_dssp HHTEEEEEEECCGGGTSCC--------------------------------------------------------TTCHH
T ss_pred hcCCeEEEEECccccccCC--------------------------------------------------------CCCcc
Confidence 245799999997543210 12357
Q ss_pred HHHHHHHHHHHHHHh-----hcCCcEEEEecCccccCCCCCCC-cccccccc-cHHHHHHhhcCCceeeccCCCceeeee
Q 010075 231 YVFTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFP-GWVEDLKT-INTLFVASAQGNLRCLVGETKVIMDVI 303 (519)
Q Consensus 231 Y~~sK~~aE~lv~~~-----~~~lp~~IvRPs~V~g~~~~p~~-gw~~~~~~-~~~~i~~~~~g~~~~~~~~~~~~~d~v 303 (519)
|+.||+..+.+.+.. ..++++.+++||.|.++...... .+...... .......... ......++
T Consensus 173 Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~p~~r~~ 243 (277)
T 2rhc_B 173 YSASKHGVVGFTKALGLELARTGITVNAVCPGFVETPMAASVREHYSDIWEVSTEEAFDRITA---------RVPIGRYV 243 (277)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTTEEEEEEEEECSBCSHHHHHHHHHHHHHHTCCHHHHHHHHHH---------HSTTSSCB
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCcEEEEEecCcCcCchhhhhhhhcccccccchHHHHHHHHh---------cCCCCCCc
Confidence 999999999888765 34799999999999875321000 00000000 0011111111 01123578
Q ss_pred eHHHHHHHHHHHHHHhccCCCCCcEEEecCCC
Q 010075 304 PVDMVVNAMIVAMVAHAKQPSDANIYHVGSSL 335 (519)
Q Consensus 304 pVDdva~aii~a~~~~~~~~~~~~iyni~s~~ 335 (519)
.++|+|++++.++..... ...++++++.+|.
T Consensus 244 ~~~dvA~~v~~l~s~~~~-~~tG~~~~vdGG~ 274 (277)
T 2rhc_B 244 QPSEVAEMVAYLIGPGAA-AVTAQALNVCGGL 274 (277)
T ss_dssp CHHHHHHHHHHHHSGGGT-TCCSCEEEESTTC
T ss_pred CHHHHHHHHHHHhCchhc-CCCCcEEEECCCc
Confidence 999999999988864322 2247899998873
|
| >4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A* | Back alignment and structure |
|---|
Probab=99.78 E-value=7.3e-18 Score=166.15 Aligned_cols=220 Identities=15% Similarity=0.132 Sum_probs=151.3
Q ss_pred cCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 010075 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (519)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (519)
++||+|+||||+|+||+++++.|++.| .+|+++.|.... ..+.+.++ +++ ...++.+
T Consensus 26 l~~k~vlVTGas~gIG~aia~~la~~G---~~V~~~~~~~~~--~~~~~~~~---------~~~---------~~~~~~~ 82 (269)
T 4dmm_A 26 LTDRIALVTGASRGIGRAIALELAAAG---AKVAVNYASSAG--AADEVVAA---------IAA---------AGGEAFA 82 (269)
T ss_dssp TTTCEEEETTCSSHHHHHHHHHHHHTT---CEEEEEESSCHH--HHHHHHHH---------HHH---------TTCCEEE
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCC---CEEEEEeCCChH--HHHHHHHH---------HHh---------cCCcEEE
Confidence 578999999999999999999999999 678888885322 12222211 111 1257889
Q ss_pred EeccCCCCCCCCChhhhHHHHh-------cCccEEEEcCccCCc-------cccHHHHHHHhHHHHHHHHHHHHhc---c
Q 010075 90 VPGDISSEDLGLKDSNLKEELW-------NELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKC---V 152 (519)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~-------~~vdiViH~Aa~v~f-------~~~~~~~~~~Nv~gt~~ll~~a~~~---~ 152 (519)
+.+|++++ +..+.++ .++|++||+||.... .+.++..+++|+.|+.++++.+... .
T Consensus 83 ~~~D~~d~-------~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~ 155 (269)
T 4dmm_A 83 VKADVSQE-------SEVEALFAAVIERWGRLDVLVNNAGITRDTLLLRMKRDDWQSVLDLNLGGVFLCSRAAAKIMLKQ 155 (269)
T ss_dssp EECCTTSH-------HHHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH
T ss_pred EECCCCCH-------HHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc
Confidence 99999953 3233333 379999999998642 2567888999999999999887432 2
Q ss_pred CCceEEEEecceeecCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcHHH
Q 010075 153 KLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYV 232 (519)
Q Consensus 153 ~l~~~V~vSTa~v~~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~Y~ 232 (519)
+..++|++||....... .....|+
T Consensus 156 ~~g~iv~isS~~~~~~~--------------------------------------------------------~~~~~Y~ 179 (269)
T 4dmm_A 156 RSGRIINIASVVGEMGN--------------------------------------------------------PGQANYS 179 (269)
T ss_dssp TCCEEEEECCHHHHHCC--------------------------------------------------------TTCHHHH
T ss_pred CCcEEEEECchhhcCCC--------------------------------------------------------CCchhHH
Confidence 55699999997654211 2245799
Q ss_pred HHHHHHHHHHHHh-----hcCCcEEEEecCccccCCCCCCCcccccccccHHHHHHhhcCCceeeccCCCceeeeeeHHH
Q 010075 233 FTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDM 307 (519)
Q Consensus 233 ~sK~~aE~lv~~~-----~~~lp~~IvRPs~V~g~~~~p~~gw~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~d~vpVDd 307 (519)
.||+..+.+.+.. ..++++..++||.|.++..... . ....... .....+..++|
T Consensus 180 asK~a~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~---------~---~~~~~~~---------~p~~r~~~~~d 238 (269)
T 4dmm_A 180 AAKAGVIGLTKTVAKELASRGITVNAVAPGFIATDMTSEL---------A---AEKLLEV---------IPLGRYGEAAE 238 (269)
T ss_dssp HHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBTTSCSCHH---------H---HHHHGGG---------CTTSSCBCHHH
T ss_pred HHHHHHHHHHHHHHHHHhhhCcEEEEEEECCCcCcccccc---------c---HHHHHhc---------CCCCCCCCHHH
Confidence 9999888777654 4589999999999987643210 0 0111111 11234678899
Q ss_pred HHHHHHHHHHHhccCCCCCcEEEecCCCC
Q 010075 308 VVNAMIVAMVAHAKQPSDANIYHVGSSLR 336 (519)
Q Consensus 308 va~aii~a~~~~~~~~~~~~iyni~s~~~ 336 (519)
+|++++.++..+...--.++++++.+|..
T Consensus 239 vA~~v~~l~s~~~~~~itG~~i~vdGG~~ 267 (269)
T 4dmm_A 239 VAGVVRFLAADPAAAYITGQVINIDGGLV 267 (269)
T ss_dssp HHHHHHHHHHCGGGGGCCSCEEEESTTSC
T ss_pred HHHHHHHHhCCcccCCCcCCEEEECCCee
Confidence 99999999875222222378999988743
|
| >3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum} | Back alignment and structure |
|---|
Probab=99.78 E-value=9.8e-18 Score=165.88 Aligned_cols=222 Identities=12% Similarity=0.091 Sum_probs=153.2
Q ss_pred cCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 010075 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (519)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (519)
++||+|+||||+|+||+++++.|++.| .+|+++.|+.... +.+.+++ ++ ...++.+
T Consensus 30 l~gk~~lVTGas~GIG~aia~~la~~G---~~V~~~~r~~~~~---~~~~~~~---------~~---------~~~~~~~ 85 (276)
T 3r1i_A 30 LSGKRALITGASTGIGKKVALAYAEAG---AQVAVAARHSDAL---QVVADEI---------AG---------VGGKALP 85 (276)
T ss_dssp CTTCEEEEESTTSHHHHHHHHHHHHTT---CEEEEEESSGGGG---HHHHHHH---------HH---------TTCCCEE
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCC---CEEEEEeCCHHHH---HHHHHHH---------Hh---------cCCeEEE
Confidence 678999999999999999999999998 6789999975432 2222111 11 1257889
Q ss_pred EeccCCCCCCCCChhhhHHHHhc-------CccEEEEcCccCCc-------cccHHHHHHHhHHHHHHHHHHHHhc---c
Q 010075 90 VPGDISSEDLGLKDSNLKEELWN-------ELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKC---V 152 (519)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~~-------~vdiViH~Aa~v~f-------~~~~~~~~~~Nv~gt~~ll~~a~~~---~ 152 (519)
+.+|++++ +..+.+++ ++|++||+||.... .+.++..+++|+.|+..+++.+.+. .
T Consensus 86 ~~~Dl~d~-------~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~ 158 (276)
T 3r1i_A 86 IRCDVTQP-------DQVRGMLDQMTGELGGIDIAVCNAGIVSVQAMLDMPLEEFQRIQDTNVTGVFLTAQAAARAMVDQ 158 (276)
T ss_dssp EECCTTCH-------HHHHHHHHHHHHHHSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH
T ss_pred EEcCCCCH-------HHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 99999953 33334433 79999999998643 2567788999999999999887542 1
Q ss_pred C-CceEEEEecceeecCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcHH
Q 010075 153 K-LKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTY 231 (519)
Q Consensus 153 ~-l~~~V~vSTa~v~~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~Y 231 (519)
+ -.++|++||...+.... + .....|
T Consensus 159 ~~~g~iv~isS~~~~~~~~------------~------------------------------------------~~~~~Y 184 (276)
T 3r1i_A 159 GLGGTIITTASMSGHIINI------------P------------------------------------------QQVSHY 184 (276)
T ss_dssp TSCEEEEEECCGGGTSCCC------------S------------------------------------------SCCHHH
T ss_pred CCCcEEEEECchHhcccCC------------C------------------------------------------CCcchH
Confidence 2 36899999976432110 0 123579
Q ss_pred HHHHHHHHHHHHHh-----hcCCcEEEEecCccccCCCCCCCcccccccccHHHHHHhhcCCceeeccCCCceeeeeeHH
Q 010075 232 VFTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVD 306 (519)
Q Consensus 232 ~~sK~~aE~lv~~~-----~~~lp~~IvRPs~V~g~~~~p~~gw~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~d~vpVD 306 (519)
+.||+..+.+.+.. ..++++..++||.|.++...+.+. ........ .....+...+
T Consensus 185 ~asKaa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~~~----------~~~~~~~~---------~p~~r~~~pe 245 (276)
T 3r1i_A 185 CTSKAAVVHLTKAMAVELAPHQIRVNSVSPGYIRTELVEPLAD----------YHALWEPK---------IPLGRMGRPE 245 (276)
T ss_dssp HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSTTTGGGGG----------GHHHHGGG---------STTSSCBCGG
T ss_pred HHHHHHHHHHHHHHHHHHhhcCcEEEEEeeCCCcCCccccchH----------HHHHHHhc---------CCCCCCcCHH
Confidence 99999999988765 357999999999998765432211 11111111 1112367789
Q ss_pred HHHHHHHHHHHHhccCCCCCcEEEecCCCC
Q 010075 307 MVVNAMIVAMVAHAKQPSDANIYHVGSSLR 336 (519)
Q Consensus 307 dva~aii~a~~~~~~~~~~~~iyni~s~~~ 336 (519)
|+|++++.++..... .-.++++++.+|..
T Consensus 246 dvA~~v~fL~s~~~~-~itG~~i~vdGG~~ 274 (276)
T 3r1i_A 246 ELTGLYLYLASAASS-YMTGSDIVIDGGYT 274 (276)
T ss_dssp GSHHHHHHHHSGGGT-TCCSCEEEESTTTT
T ss_pred HHHHHHHHHcCcccc-CccCcEEEECcCcc
Confidence 999999998864332 22478999988743
|
| >3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus} | Back alignment and structure |
|---|
Probab=99.78 E-value=4.6e-18 Score=166.40 Aligned_cols=223 Identities=18% Similarity=0.157 Sum_probs=144.8
Q ss_pred cCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 010075 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (519)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (519)
+++|+|+||||+|+||++++++|++.| .+|+++.|+... .+++. ++. ..++.+
T Consensus 7 l~~k~vlITGas~gIG~~~a~~l~~~G---~~V~~~~r~~~~---~~~~~-------------~~~--------~~~~~~ 59 (261)
T 3n74_A 7 LEGKVALITGAGSGFGEGMAKRFAKGG---AKVVIVDRDKAG---AERVA-------------GEI--------GDAALA 59 (261)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHTT---CEEEEEESCHHH---HHHHH-------------HHH--------CTTEEE
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCC---CEEEEEcCCHHH---HHHHH-------------HHh--------CCceEE
Confidence 578999999999999999999999998 678999887422 12221 111 357899
Q ss_pred EeccCCCCCCCCChhhhHHHHh-------cCccEEEEcCccCCc--------cccHHHHHHHhHHHHHHHHHHHHhc-c-
Q 010075 90 VPGDISSEDLGLKDSNLKEELW-------NELDIMVNSAAITKF--------DERYDVAFGINTLGVIHLVNFAKKC-V- 152 (519)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~-------~~vdiViH~Aa~v~f--------~~~~~~~~~~Nv~gt~~ll~~a~~~-~- 152 (519)
+.+|++++ +..+.++ .++|++||+||.... .+.++..+++|+.|+.++++.+... .
T Consensus 60 ~~~D~~~~-------~~~~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~ 132 (261)
T 3n74_A 60 VAADISKE-------ADVDAAVEAALSKFGKVDILVNNAGIGHKPQNAELVEPEEFDRIVGVNVRGVYLMTSKLIPHFKE 132 (261)
T ss_dssp EECCTTSH-------HHHHHHHHHHHHHHSCCCEEEECCCCCCCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHH
T ss_pred EEecCCCH-------HHHHHHHHHHHHhcCCCCEEEECCccCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHh
Confidence 99999953 3223333 379999999997541 2567788999999999988877542 1
Q ss_pred -----CCceEEEEecceeecCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCC
Q 010075 153 -----KLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGW 227 (519)
Q Consensus 153 -----~l~~~V~vSTa~v~~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~ 227 (519)
+..++|++||...+... ..
T Consensus 133 ~~~~~~~~~iv~isS~~~~~~~--------------------------------------------------------~~ 156 (261)
T 3n74_A 133 NGAKGQECVILNVASTGAGRPR--------------------------------------------------------PN 156 (261)
T ss_dssp HHHTTCCEEEEEECCTTTTSCC--------------------------------------------------------TT
T ss_pred cCCCCCCeEEEEeCchhhcCCC--------------------------------------------------------CC
Confidence 13469999997544211 22
Q ss_pred CcHHHHHHHHHHHHHHHh-----hcCCcEEEEecCccccCCCCCCCcccccccccHHHHHHhhcCCceeeccCCCceeee
Q 010075 228 PNTYVFTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDV 302 (519)
Q Consensus 228 ~n~Y~~sK~~aE~lv~~~-----~~~lp~~IvRPs~V~g~~~~p~~gw~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~d~ 302 (519)
...|+.||+..+.+.+.. ..++.+..++||.|.++......+ . ...... ...........+
T Consensus 157 ~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~---~--~~~~~~---------~~~~~~~~~~~~ 222 (261)
T 3n74_A 157 LAWYNATKGWVVSVTKALAIELAPAKIRVVALNPVAGETPLLTTFMG---E--DSEEIR---------KKFRDSIPMGRL 222 (261)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC---------------------------------------CTTSSC
T ss_pred ccHHHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccChhhhhhcc---c--CcHHHH---------HHHhhcCCcCCC
Confidence 356999999999988765 357999999999998875432110 0 000000 011122233467
Q ss_pred eeHHHHHHHHHHHHHHhccCCCCCcEEEecCCCCC
Q 010075 303 IPVDMVVNAMIVAMVAHAKQPSDANIYHVGSSLRN 337 (519)
Q Consensus 303 vpVDdva~aii~a~~~~~~~~~~~~iyni~s~~~~ 337 (519)
+.++|+|++++.++.... ..-.++++++.+|...
T Consensus 223 ~~~~dva~~~~~l~s~~~-~~itG~~i~vdgG~~~ 256 (261)
T 3n74_A 223 LKPDDLAEAAAFLCSPQA-SMITGVALDVDGGRSI 256 (261)
T ss_dssp CCHHHHHHHHHHHTSGGG-TTCCSCEEEESTTTTC
T ss_pred cCHHHHHHHHHHHcCCcc-cCcCCcEEEecCCccc
Confidence 899999999998885332 2224789999988543
|
| >2p91_A Enoyl-[acyl-carrier-protein] reductase [NADH]; NADH-dependent enoyl-ACP reductase, FABI, aquifex A VF5, structural genomics, PSI; 2.00A {Aquifex aeolicus} | Back alignment and structure |
|---|
Probab=99.78 E-value=1.2e-17 Score=165.95 Aligned_cols=220 Identities=18% Similarity=0.158 Sum_probs=149.6
Q ss_pred cCCCEEEEeCCc--cHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCce
Q 010075 10 LENKTILVSGVT--GFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKI 87 (519)
Q Consensus 10 ~~~k~VlITGaT--GFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v 87 (519)
++||+|+||||+ |+||+++++.|++.| .+|+++.|+.......+.+. ++. ..+
T Consensus 19 l~~k~vlVTGas~~~gIG~~ia~~l~~~G---~~V~~~~r~~~~~~~~~~l~-------------~~~---------~~~ 73 (285)
T 2p91_A 19 LEGKRALITGVANERSIAYGIAKSFHREG---AQLAFTYATPKLEKRVREIA-------------KGF---------GSD 73 (285)
T ss_dssp TTTCEEEECCCSSTTSHHHHHHHHHHHTT---CEEEEEESSGGGHHHHHHHH-------------HHT---------TCC
T ss_pred cCCCEEEEECCCCCCcHHHHHHHHHHHcC---CEEEEEeCCHHHHHHHHHHH-------------Hhc---------CCe
Confidence 678999999999 999999999999998 67899998753211222221 111 236
Q ss_pred EEEeccCCCCCCCCChhhhHHHHh-------cCccEEEEcCccCCc-----------cccHHHHHHHhHHHHHHHHHHHH
Q 010075 88 TFVPGDISSEDLGLKDSNLKEELW-------NELDIMVNSAAITKF-----------DERYDVAFGINTLGVIHLVNFAK 149 (519)
Q Consensus 88 ~~v~gDl~~~~lgls~~~~~~~l~-------~~vdiViH~Aa~v~f-----------~~~~~~~~~~Nv~gt~~ll~~a~ 149 (519)
.++.+|++++ +..+.++ .++|+|||+||.... .+.++..+++|+.|+.++++.+.
T Consensus 74 ~~~~~Dl~~~-------~~v~~~~~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~ 146 (285)
T 2p91_A 74 LVVKCDVSLD-------EDIKNLKKFLEENWGSLDIIVHSIAYAPKEEFKGGVIDTSREGFKIAMDISVYSLIALTRELL 146 (285)
T ss_dssp CEEECCTTCH-------HHHHHHHHHHHHHTSCCCEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHG
T ss_pred EEEEcCCCCH-------HHHHHHHHHHHHHcCCCCEEEECCCCCCcccCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHH
Confidence 7899999953 2223333 379999999997532 24577889999999999999987
Q ss_pred hc-c-CCceEEEEecceeecCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCC
Q 010075 150 KC-V-KLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGW 227 (519)
Q Consensus 150 ~~-~-~l~~~V~vSTa~v~~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~ 227 (519)
+. . +-.++|++||...+... ..
T Consensus 147 ~~~~~~~g~iv~isS~~~~~~~--------------------------------------------------------~~ 170 (285)
T 2p91_A 147 PLMEGRNGAIVTLSYYGAEKVV--------------------------------------------------------PH 170 (285)
T ss_dssp GGGTTSCCEEEEEECGGGTSBC--------------------------------------------------------TT
T ss_pred HHHHHcCCEEEEEccchhccCC--------------------------------------------------------CC
Confidence 63 1 23699999997543211 12
Q ss_pred CcHHHHHHHHHHHHHHHh-----hcCCcEEEEecCccccCCCCCCCcccccccccHHHHHHhhcCCceeeccCCCceeee
Q 010075 228 PNTYVFTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDV 302 (519)
Q Consensus 228 ~n~Y~~sK~~aE~lv~~~-----~~~lp~~IvRPs~V~g~~~~p~~gw~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~d~ 302 (519)
...|+.||+..+.+++.+ ..++++.+++||.|.++.....+. ............ ....+
T Consensus 171 ~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~-------~~~~~~~~~~~~---------p~~~~ 234 (285)
T 2p91_A 171 YNVMGIAKAALESTVRYLAYDIAKHGHRINAISAGPVKTLAAYSITG-------FHLLMEHTTKVN---------PFGKP 234 (285)
T ss_dssp TTHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCSCC--CTT-------HHHHHHHHHHHS---------TTSSC
T ss_pred ccHHHHHHHHHHHHHHHHHHHhcccCcEEEEEEeCcccCchhhcccc-------hHHHHHHHHhcC---------CCCCC
Confidence 357999999999988765 347999999999998875432111 111111111110 11235
Q ss_pred eeHHHHHHHHHHHHHHhccCCCCCcEEEecCC
Q 010075 303 IPVDMVVNAMIVAMVAHAKQPSDANIYHVGSS 334 (519)
Q Consensus 303 vpVDdva~aii~a~~~~~~~~~~~~iyni~s~ 334 (519)
.+++|+|++++.++.... ....+++|++.+|
T Consensus 235 ~~~~dva~~~~~l~s~~~-~~~tG~~~~vdgg 265 (285)
T 2p91_A 235 ITIEDVGDTAVFLCSDWA-RAITGEVVHVDNG 265 (285)
T ss_dssp CCHHHHHHHHHHHTSGGG-TTCCSCEEEESTT
T ss_pred cCHHHHHHHHHHHcCCcc-cCCCCCEEEECCC
Confidence 789999999999885332 2223688999887
|
| >2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.78 E-value=1.8e-17 Score=164.57 Aligned_cols=220 Identities=15% Similarity=0.144 Sum_probs=147.4
Q ss_pred cCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 010075 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (519)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (519)
+++|+|+||||||+||+++++.|++.| .+|+++.|+... .+.+.++ +++. ..++.+
T Consensus 42 l~~k~vlITGasggIG~~la~~L~~~G---~~V~~~~r~~~~---~~~~~~~---------l~~~---------~~~~~~ 97 (285)
T 2c07_A 42 GENKVALVTGAGRGIGREIAKMLAKSV---SHVICISRTQKS---CDSVVDE---------IKSF---------GYESSG 97 (285)
T ss_dssp CSSCEEEEESTTSHHHHHHHHHHTTTS---SEEEEEESSHHH---HHHHHHH---------HHTT---------TCCEEE
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHcC---CEEEEEcCCHHH---HHHHHHH---------HHhc---------CCceeE
Confidence 568999999999999999999999988 678887775321 1222111 1110 246889
Q ss_pred EeccCCCCCCCCChhhhHHHHh-------cCccEEEEcCccCCc-------cccHHHHHHHhHHHHHHHHHHHHhc---c
Q 010075 90 VPGDISSEDLGLKDSNLKEELW-------NELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKC---V 152 (519)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~-------~~vdiViH~Aa~v~f-------~~~~~~~~~~Nv~gt~~ll~~a~~~---~ 152 (519)
+.+|++++ +..+.++ .++|+|||+||.... .+.++..+++|+.|+.++++.+.+. .
T Consensus 98 ~~~Dl~d~-------~~v~~~~~~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~ 170 (285)
T 2c07_A 98 YAGDVSKK-------EEISEVINKILTEHKNVDILVNNAGITRDNLFLRMKNDEWEDVLRTNLNSLFYITQPISKRMINN 170 (285)
T ss_dssp EECCTTCH-------HHHHHHHHHHHHHCSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHH
T ss_pred EECCCCCH-------HHHHHHHHHHHHhcCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhC
Confidence 99999953 3233433 479999999997642 2467788999999988887776531 2
Q ss_pred CCceEEEEecceeecCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcHHH
Q 010075 153 KLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYV 232 (519)
Q Consensus 153 ~l~~~V~vSTa~v~~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~Y~ 232 (519)
+..+||++||...+... .....|+
T Consensus 171 ~~~~iv~isS~~~~~~~--------------------------------------------------------~~~~~Y~ 194 (285)
T 2c07_A 171 RYGRIINISSIVGLTGN--------------------------------------------------------VGQANYS 194 (285)
T ss_dssp TCEEEEEECCTHHHHCC--------------------------------------------------------TTCHHHH
T ss_pred CCCEEEEECChhhccCC--------------------------------------------------------CCCchHH
Confidence 56899999998654211 1235799
Q ss_pred HHHHHHHHHHHHh-----hcCCcEEEEecCccccCCCCCCCcccccccccHHHHHHhhcCCceeeccCCCceeeeeeHHH
Q 010075 233 FTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDM 307 (519)
Q Consensus 233 ~sK~~aE~lv~~~-----~~~lp~~IvRPs~V~g~~~~p~~gw~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~d~vpVDd 307 (519)
.||+..|.+++.+ ..+++++++|||.|.++.....+ ........... ....+++++|
T Consensus 195 asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~---------~~~~~~~~~~~---------~~~~~~~~~d 256 (285)
T 2c07_A 195 SSKAGVIGFTKSLAKELASRNITVNAIAPGFISSDMTDKIS---------EQIKKNIISNI---------PAGRMGTPEE 256 (285)
T ss_dssp HHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCC-----CC---------HHHHHHHHTTC---------TTSSCBCHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhCcEEEEEEeCcEecCchhhcC---------HHHHHHHHhhC---------CCCCCCCHHH
Confidence 9999998887754 34899999999999876432111 11111111110 1124789999
Q ss_pred HHHHHHHHHHHhccCCCCCcEEEecCCC
Q 010075 308 VVNAMIVAMVAHAKQPSDANIYHVGSSL 335 (519)
Q Consensus 308 va~aii~a~~~~~~~~~~~~iyni~s~~ 335 (519)
+|++++.++..... ...++++++.+|.
T Consensus 257 vA~~~~~l~~~~~~-~~~G~~i~v~gG~ 283 (285)
T 2c07_A 257 VANLACFLSSDKSG-YINGRVFVIDGGL 283 (285)
T ss_dssp HHHHHHHHHSGGGT-TCCSCEEEESTTS
T ss_pred HHHHHHHHhCCCcC-CCCCCEEEeCCCc
Confidence 99999998864322 2236899998873
|
| >3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.78 E-value=6.9e-18 Score=166.72 Aligned_cols=221 Identities=12% Similarity=0.095 Sum_probs=151.5
Q ss_pred cCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 010075 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (519)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (519)
++||+++||||+|+||++++++|++.| .+|+++.|.... +++.+++ .+ ...++.+
T Consensus 29 l~gk~~lVTGas~GIG~aia~~la~~G---~~V~~~~r~~~~----~~~~~~~---------~~---------~~~~~~~ 83 (273)
T 3uf0_A 29 LAGRTAVVTGAGSGIGRAIAHGYARAG---AHVLAWGRTDGV----KEVADEI---------AD---------GGGSAEA 83 (273)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTT---CEEEEEESSTHH----HHHHHHH---------HT---------TTCEEEE
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCC---CEEEEEcCHHHH----HHHHHHH---------Hh---------cCCcEEE
Confidence 678999999999999999999999998 578888875322 2222111 11 1257889
Q ss_pred EeccCCCCCCCCChhhhHHHHh------cCccEEEEcCccCCc-------cccHHHHHHHhHHHHHHHHHHHHhc---cC
Q 010075 90 VPGDISSEDLGLKDSNLKEELW------NELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKC---VK 153 (519)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~------~~vdiViH~Aa~v~f-------~~~~~~~~~~Nv~gt~~ll~~a~~~---~~ 153 (519)
+.+|+++++ + .+.+. .++|++||+||.... .+.++..+++|+.|+..+++.+... .+
T Consensus 84 ~~~Dv~d~~------~-v~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~ 156 (273)
T 3uf0_A 84 VVADLADLE------G-AANVAEELAATRRVDVLVNNAGIIARAPAEEVSLGRWREVLTVNLDAAWVLSRSFGTAMLAHG 156 (273)
T ss_dssp EECCTTCHH------H-HHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT
T ss_pred EEecCCCHH------H-HHHHHHHHHhcCCCcEEEECCCCCCCCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC
Confidence 999999632 2 22222 379999999998643 2467888999999999999877431 25
Q ss_pred CceEEEEecceeecCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcHHHH
Q 010075 154 LKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVF 233 (519)
Q Consensus 154 l~~~V~vSTa~v~~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~Y~~ 233 (519)
..++|++||...+... .....|+.
T Consensus 157 ~g~IV~isS~~~~~~~--------------------------------------------------------~~~~~Y~a 180 (273)
T 3uf0_A 157 SGRIVTIASMLSFQGG--------------------------------------------------------RNVAAYAA 180 (273)
T ss_dssp CEEEEEECCGGGTSCC--------------------------------------------------------SSCHHHHH
T ss_pred CCEEEEEcchHhcCCC--------------------------------------------------------CCChhHHH
Confidence 6789999998654211 22357999
Q ss_pred HHHHHHHHHHHh-----hcCCcEEEEecCccccCCCCCCCcccccccccHHHHHHhhcCCceeeccCCCceeeeeeHHHH
Q 010075 234 TKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMV 308 (519)
Q Consensus 234 sK~~aE~lv~~~-----~~~lp~~IvRPs~V~g~~~~p~~gw~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~d~vpVDdv 308 (519)
||+..+.+.+.. ..++++..++||.|.++..... ............+ .....+..++|+
T Consensus 181 sKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~-------~~~~~~~~~~~~~---------~p~~r~~~pedv 244 (273)
T 3uf0_A 181 SKHAVVGLTRALASEWAGRGVGVNALAPGYVVTANTAAL-------RADDERAAEITAR---------IPAGRWATPEDM 244 (273)
T ss_dssp HHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHH-------HTSHHHHHHHHHH---------STTSSCBCGGGG
T ss_pred HHHHHHHHHHHHHHHHhhcCcEEEEEEeCCCcCCchhhc-------ccCHHHHHHHHhc---------CCCCCCCCHHHH
Confidence 999999888765 3579999999999987643211 0011111111111 112346788999
Q ss_pred HHHHHHHHHHhccCCCCCcEEEecCCC
Q 010075 309 VNAMIVAMVAHAKQPSDANIYHVGSSL 335 (519)
Q Consensus 309 a~aii~a~~~~~~~~~~~~iyni~s~~ 335 (519)
|++++.++..... .-.++++++.+|.
T Consensus 245 a~~v~~L~s~~a~-~itG~~i~vdGG~ 270 (273)
T 3uf0_A 245 VGPAVFLASDAAS-YVHGQVLAVDGGW 270 (273)
T ss_dssp HHHHHHHHSGGGT-TCCSCEEEESTTG
T ss_pred HHHHHHHhCchhc-CCcCCEEEECcCc
Confidence 9999998864332 2247899998873
|
| >3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} SCOP: c.2.1.2 PDB: 3rsh_A* 3rro_A* 4i08_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E | Back alignment and structure |
|---|
Probab=99.78 E-value=4.5e-18 Score=165.56 Aligned_cols=217 Identities=14% Similarity=0.123 Sum_probs=150.8
Q ss_pred cCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 010075 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (519)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (519)
++||+++||||+|+||++++++|++.| .+|+++.|+... .+.+.+ +. ..++..
T Consensus 7 l~gk~~lVTGas~gIG~a~a~~l~~~G---~~V~~~~r~~~~---~~~~~~-------------~~--------~~~~~~ 59 (248)
T 3op4_A 7 LEGKVALVTGASRGIGKAIAELLAERG---AKVIGTATSESG---AQAISD-------------YL--------GDNGKG 59 (248)
T ss_dssp CTTCEEEESSCSSHHHHHHHHHHHHTT---CEEEEEESSHHH---HHHHHH-------------HH--------GGGEEE
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCC---CEEEEEeCCHHH---HHHHHH-------------Hh--------cccceE
Confidence 578999999999999999999999999 678888886422 122211 11 245678
Q ss_pred EeccCCCCCCCCChhhhHHHHh-------cCccEEEEcCccCCc-------cccHHHHHHHhHHHHHHHHHHHHhc---c
Q 010075 90 VPGDISSEDLGLKDSNLKEELW-------NELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKC---V 152 (519)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~-------~~vdiViH~Aa~v~f-------~~~~~~~~~~Nv~gt~~ll~~a~~~---~ 152 (519)
+.+|++++ +..+.+. .++|++||+||.... .+.++..+++|+.|+.++++.+.+. +
T Consensus 60 ~~~Dv~d~-------~~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~ 132 (248)
T 3op4_A 60 MALNVTNP-------ESIEAVLKAITDEFGGVDILVNNAGITRDNLLMRMKEEEWSDIMETNLTSIFRLSKAVLRGMMKK 132 (248)
T ss_dssp EECCTTCH-------HHHHHHHHHHHHHHCCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH
T ss_pred EEEeCCCH-------HHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc
Confidence 99999963 3233433 379999999997642 2567888999999999999887541 3
Q ss_pred CCceEEEEecceeecCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcHHH
Q 010075 153 KLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYV 232 (519)
Q Consensus 153 ~l~~~V~vSTa~v~~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~Y~ 232 (519)
+..++|++||....... .....|+
T Consensus 133 ~~g~iv~isS~~~~~~~--------------------------------------------------------~~~~~Y~ 156 (248)
T 3op4_A 133 RQGRIINVGSVVGTMGN--------------------------------------------------------AGQANYA 156 (248)
T ss_dssp TCEEEEEECCHHHHHCC--------------------------------------------------------TTCHHHH
T ss_pred CCCEEEEEcchhhcCCC--------------------------------------------------------CCChHHH
Confidence 55799999997544211 2245799
Q ss_pred HHHHHHHHHHHHh-----hcCCcEEEEecCccccCCCCCCCcccccccccHHHHHHhhcCCceeeccCCCceeeeeeHHH
Q 010075 233 FTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDM 307 (519)
Q Consensus 233 ~sK~~aE~lv~~~-----~~~lp~~IvRPs~V~g~~~~p~~gw~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~d~vpVDd 307 (519)
.||+..+.+.+.. ..++++..++||.|..+.....+ .........+ .....+..++|
T Consensus 157 asK~a~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~---------~~~~~~~~~~---------~p~~r~~~p~d 218 (248)
T 3op4_A 157 AAKAGVIGFTKSMAREVASRGVTVNTVAPGFIETDMTKALN---------DEQRTATLAQ---------VPAGRLGDPRE 218 (248)
T ss_dssp HHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSTTTTTSC---------HHHHHHHHHT---------CTTCSCBCHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhCeEEEEEeeCCCCCchhhhcC---------HHHHHHHHhc---------CCCCCCcCHHH
Confidence 9999888777654 45899999999999776543211 1111111111 12234688999
Q ss_pred HHHHHHHHHHHhccCCCCCcEEEecCCC
Q 010075 308 VVNAMIVAMVAHAKQPSDANIYHVGSSL 335 (519)
Q Consensus 308 va~aii~a~~~~~~~~~~~~iyni~s~~ 335 (519)
+|++++.++.... ..-.++++++.+|.
T Consensus 219 va~~v~~L~s~~~-~~itG~~i~vdgG~ 245 (248)
T 3op4_A 219 IASAVAFLASPEA-AYITGETLHVNGGM 245 (248)
T ss_dssp HHHHHHHHHSGGG-TTCCSCEEEESTTS
T ss_pred HHHHHHHHcCCcc-CCccCcEEEECCCe
Confidence 9999998886432 22247899998873
|
| >1qsg_A Enoyl-[acyl-carrier-protein] reductase; enoyl reductase, oxidoreductase; HET: GLC NAD TCL; 1.75A {Escherichia coli} SCOP: c.2.1.2 PDB: 1c14_A* 1i2z_A* 1i30_A* 1lx6_A* 1lxc_A* 1mfp_A* 2fhs_A 1qg6_A* 1dfg_A* 1dfh_A* 1d8a_A* 1dfi_A* 3pje_A* 3pjd_A* 3pjf_A* | Back alignment and structure |
|---|
Probab=99.78 E-value=1.1e-17 Score=164.39 Aligned_cols=221 Identities=13% Similarity=0.136 Sum_probs=150.2
Q ss_pred cCCCEEEEeCCc--cHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCce
Q 010075 10 LENKTILVSGVT--GFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKI 87 (519)
Q Consensus 10 ~~~k~VlITGaT--GFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v 87 (519)
+++|+|+||||+ |+||+++++.|++.| .+|+++.|+.......+++. ++. ...
T Consensus 7 l~~k~vlVTGas~~~gIG~~ia~~l~~~G---~~V~~~~r~~~~~~~~~~l~-------------~~~---------~~~ 61 (265)
T 1qsg_A 7 LSGKRILVTGVASKLSIAYGIAQAMHREG---AELAFTYQNDKLKGRVEEFA-------------AQL---------GSD 61 (265)
T ss_dssp TTTCEEEECCCCSTTSHHHHHHHHHHHTT---CEEEEEESSTTTHHHHHHHH-------------HHT---------TCC
T ss_pred cCCCEEEEECCCCCCCHHHHHHHHHHHCC---CEEEEEcCcHHHHHHHHHHH-------------Hhc---------CCc
Confidence 678999999999 999999999999998 67899999763222222221 111 224
Q ss_pred EEEeccCCCCCCCCChhhhHHHHhc-------CccEEEEcCccCCc------------cccHHHHHHHhHHHHHHHHHHH
Q 010075 88 TFVPGDISSEDLGLKDSNLKEELWN-------ELDIMVNSAAITKF------------DERYDVAFGINTLGVIHLVNFA 148 (519)
Q Consensus 88 ~~v~gDl~~~~lgls~~~~~~~l~~-------~vdiViH~Aa~v~f------------~~~~~~~~~~Nv~gt~~ll~~a 148 (519)
.++.+|++++ +..+.+++ ++|+|||+||.... .+.++..+++|+.|+.++++.+
T Consensus 62 ~~~~~D~~~~-------~~v~~~~~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~ 134 (265)
T 1qsg_A 62 IVLQCDVAED-------ASIDTMFAELGKVWPKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKAC 134 (265)
T ss_dssp CEEECCTTCH-------HHHHHHHHHHHTTCSSEEEEEECCCCCCGGGGSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHH
T ss_pred EEEEccCCCH-------HHHHHHHHHHHHHcCCCCEEEECCCCCCccccCCCccccCCHHHHHHHHHHHhHHHHHHHHHH
Confidence 6889999963 22333332 68999999997541 2456778999999999999998
Q ss_pred Hhc-cCCceEEEEecceeecCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCC
Q 010075 149 KKC-VKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGW 227 (519)
Q Consensus 149 ~~~-~~l~~~V~vSTa~v~~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~ 227 (519)
.+. .+-.++|++||...+... ..
T Consensus 135 ~~~~~~~g~iv~isS~~~~~~~--------------------------------------------------------~~ 158 (265)
T 1qsg_A 135 RSMLNPGSALLTLSYLGAERAI--------------------------------------------------------PN 158 (265)
T ss_dssp GGGEEEEEEEEEEECGGGTSBC--------------------------------------------------------TT
T ss_pred HHHhccCCEEEEEcchhhccCC--------------------------------------------------------CC
Confidence 763 123589999997554211 12
Q ss_pred CcHHHHHHHHHHHHHHHh-----hcCCcEEEEecCccccCCCCCCCcccccccccHHHHHHhhcCCceeeccCCCceeee
Q 010075 228 PNTYVFTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDV 302 (519)
Q Consensus 228 ~n~Y~~sK~~aE~lv~~~-----~~~lp~~IvRPs~V~g~~~~p~~gw~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~d~ 302 (519)
...|+.||+..+.+.+.. ..++++.+++||.|.++.....+ ...........+. ....+
T Consensus 159 ~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~-------~~~~~~~~~~~~~---------p~~~~ 222 (265)
T 1qsg_A 159 YNVMGLAKASLEANVRYMANAMGPEGVRVNAISAGPIRTLAASGIK-------DFRKMLAHCEAVT---------PIRRT 222 (265)
T ss_dssp TTHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCCCCTTGGGST-------THHHHHHHHHHHS---------TTSSC
T ss_pred chHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeCCCccchhhccc-------ccHHHHHHHHhcC---------CCCCC
Confidence 357999999999998765 34799999999999887542211 1111121111111 11235
Q ss_pred eeHHHHHHHHHHHHHHhccCCCCCcEEEecCCC
Q 010075 303 IPVDMVVNAMIVAMVAHAKQPSDANIYHVGSSL 335 (519)
Q Consensus 303 vpVDdva~aii~a~~~~~~~~~~~~iyni~s~~ 335 (519)
.+++|+|++++.++.... ..-.++++++.+|.
T Consensus 223 ~~~~dva~~v~~l~s~~~-~~~tG~~~~vdgG~ 254 (265)
T 1qsg_A 223 VTIEDVGNSAAFLCSDLS-AGISGEVVHVDGGF 254 (265)
T ss_dssp CCHHHHHHHHHHHTSGGG-TTCCSCEEEESTTG
T ss_pred CCHHHHHHHHHHHhCchh-cCccCCEEEECCCc
Confidence 789999999998886432 22236899998874
|
| >3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD binding; 2.30A {Thermoplasma volcanium} | Back alignment and structure |
|---|
Probab=99.78 E-value=3.4e-18 Score=168.49 Aligned_cols=224 Identities=13% Similarity=0.137 Sum_probs=152.4
Q ss_pred hhhhcCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCC
Q 010075 6 VVEFLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISE 85 (519)
Q Consensus 6 i~~~~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~ 85 (519)
-...++||+||||||+|+||++++++|++.| .+|+++.|+.... ..
T Consensus 8 ~~~~~~~k~vlVTGas~GIG~aia~~l~~~G---~~V~~~~r~~~~~-------------------------------~~ 53 (269)
T 3vtz_A 8 HMEEFTDKVAIVTGGSSGIGLAVVDALVRYG---AKVVSVSLDEKSD-------------------------------VN 53 (269)
T ss_dssp --CTTTTCEEEESSTTSHHHHHHHHHHHHTT---CEEEEEESCC--C-------------------------------TT
T ss_pred cccCCCCCEEEEeCCCCHHHHHHHHHHHHCC---CEEEEEeCCchhc-------------------------------cC
Confidence 4566889999999999999999999999998 6788888875322 13
Q ss_pred ceEEEeccCCCCCCCCChhhhHHHHh-------cCccEEEEcCccCCc-------cccHHHHHHHhHHHHHHHHHHHHhc
Q 010075 86 KITFVPGDISSEDLGLKDSNLKEELW-------NELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKC 151 (519)
Q Consensus 86 ~v~~v~gDl~~~~lgls~~~~~~~l~-------~~vdiViH~Aa~v~f-------~~~~~~~~~~Nv~gt~~ll~~a~~~ 151 (519)
.+..+.+|++++ +..+.++ .++|++||+||.... .+.++..+++|+.|+..+++.+...
T Consensus 54 ~~~~~~~Dv~~~-------~~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~ 126 (269)
T 3vtz_A 54 VSDHFKIDVTNE-------EEVKEAVEKTTKKYGRIDILVNNAGIEQYSPLHLTPTEIWRRIIDVNVNGSYLMAKYTIPV 126 (269)
T ss_dssp SSEEEECCTTCH-------HHHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred ceeEEEecCCCH-------HHHHHHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence 567889999963 2223333 379999999997543 2457788999999999998887542
Q ss_pred ---cCCceEEEEecceeecCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCC
Q 010075 152 ---VKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWP 228 (519)
Q Consensus 152 ---~~l~~~V~vSTa~v~~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~ 228 (519)
.+..++|++||...+... ...
T Consensus 127 ~~~~~~g~iv~isS~~~~~~~--------------------------------------------------------~~~ 150 (269)
T 3vtz_A 127 MLAIGHGSIINIASVQSYAAT--------------------------------------------------------KNA 150 (269)
T ss_dssp HHHHTCEEEEEECCGGGTSBC--------------------------------------------------------TTC
T ss_pred HHHcCCCEEEEECchhhccCC--------------------------------------------------------CCC
Confidence 256799999998765421 224
Q ss_pred cHHHHHHHHHHHHHHHh----hcCCcEEEEecCccccCCCCCCCccc--ccccccHHHHHHhhcCCceeeccCCCceeee
Q 010075 229 NTYVFTKTMGEMLMQQS----KENLSLVIIRPTVVSGTYKEPFPGWV--EDLKTINTLFVASAQGNLRCLVGETKVIMDV 302 (519)
Q Consensus 229 n~Y~~sK~~aE~lv~~~----~~~lp~~IvRPs~V~g~~~~p~~gw~--~~~~~~~~~i~~~~~g~~~~~~~~~~~~~d~ 302 (519)
..|+.||+..+.+.+.+ .+++.+..++||.|.++......... ............... ......+
T Consensus 151 ~~Y~asKaa~~~l~~~la~e~~~~i~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~p~~r~ 221 (269)
T 3vtz_A 151 AAYVTSKHALLGLTRSVAIDYAPKIRCNAVCPGTIMTPMVIKAAKMEVGEDENAVERKIEEWGR---------QHPMGRI 221 (269)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCCHHHHHHHHHHHCCSTTHHHHHHHHHHH---------HSTTSSC
T ss_pred hhHHHHHHHHHHHHHHHHHHhcCCCEEEEEEECCCcCcchhhhhhccccccchhhHHHHHHHHh---------cCCCCCC
Confidence 57999999999988765 34799999999999875421000000 000000111111111 1123356
Q ss_pred eeHHHHHHHHHHHHHHhccCCCCCcEEEecCCCC
Q 010075 303 IPVDMVVNAMIVAMVAHAKQPSDANIYHVGSSLR 336 (519)
Q Consensus 303 vpVDdva~aii~a~~~~~~~~~~~~iyni~s~~~ 336 (519)
..++|+|++++.++..... .-.++++++.+|..
T Consensus 222 ~~pedvA~~v~~L~s~~~~-~itG~~i~vdGG~~ 254 (269)
T 3vtz_A 222 GRPEEVAEVVAFLASDRSS-FITGACLTVDGGLL 254 (269)
T ss_dssp BCHHHHHHHHHHHHSGGGT-TCCSCEEEESTTGG
T ss_pred cCHHHHHHHHHHHhCCccC-CCcCcEEEECCCcc
Confidence 7899999999998864332 22478999998844
|
| >3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.78 E-value=1.1e-17 Score=165.84 Aligned_cols=223 Identities=14% Similarity=0.102 Sum_probs=153.1
Q ss_pred cCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 010075 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (519)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (519)
++||+|+||||+|+||+++++.|++.| .+|+++.|+... .+++.+++ ++ ...++.+
T Consensus 6 l~gk~vlVTGas~GIG~aia~~la~~G---~~V~~~~r~~~~---~~~~~~~~---------~~---------~~~~~~~ 61 (280)
T 3tox_A 6 LEGKIAIVTGASSGIGRAAALLFAREG---AKVVVTARNGNA---LAELTDEI---------AG---------GGGEAAA 61 (280)
T ss_dssp TTTCEEEESSTTSHHHHHHHHHHHHTT---CEEEECCSCHHH---HHHHHHHH---------TT---------TTCCEEE
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCC---CEEEEEECCHHH---HHHHHHHH---------Hh---------cCCcEEE
Confidence 678999999999999999999999998 678888886421 22222111 11 1357889
Q ss_pred EeccCCCCCCCCChhhhHHHHh-------cCccEEEEcCccCCc--------cccHHHHHHHhHHHHHHHHHHHHhc---
Q 010075 90 VPGDISSEDLGLKDSNLKEELW-------NELDIMVNSAAITKF--------DERYDVAFGINTLGVIHLVNFAKKC--- 151 (519)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~-------~~vdiViH~Aa~v~f--------~~~~~~~~~~Nv~gt~~ll~~a~~~--- 151 (519)
+.+|++++ +..+.++ .++|++||+||.... .+.++..+++|+.|+..+++.+...
T Consensus 62 ~~~Dv~~~-------~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~ 134 (280)
T 3tox_A 62 LAGDVGDE-------ALHEALVELAVRRFGGLDTAFNNAGALGAMGEISSLSVEGWRETLDTNLTSAFLAAKYQVPAIAA 134 (280)
T ss_dssp CCCCTTCH-------HHHHHHHHHHHHHHSCCCEEEECCCCCCSCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHH
T ss_pred EECCCCCH-------HHHHHHHHHHHHHcCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHH
Confidence 99999963 3233333 379999999996521 2567888999999999999887542
Q ss_pred cCCceEEEEecceeecCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcHH
Q 010075 152 VKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTY 231 (519)
Q Consensus 152 ~~l~~~V~vSTa~v~~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~Y 231 (519)
.+-.++|++||...+... + .....|
T Consensus 135 ~~~g~iv~isS~~~~~~~--------~-----------------------------------------------~~~~~Y 159 (280)
T 3tox_A 135 LGGGSLTFTSSFVGHTAG--------F-----------------------------------------------AGVAPY 159 (280)
T ss_dssp TTCEEEEEECCSBTTTBC--------C-----------------------------------------------TTCHHH
T ss_pred cCCCEEEEEcChhhCcCC--------C-----------------------------------------------CCchhH
Confidence 245699999997654210 0 224579
Q ss_pred HHHHHHHHHHHHHh-----hcCCcEEEEecCccccCCCCC-CCcccccccccHHHHHHhhcCCceeeccCCCceeeeeeH
Q 010075 232 VFTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEP-FPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPV 305 (519)
Q Consensus 232 ~~sK~~aE~lv~~~-----~~~lp~~IvRPs~V~g~~~~p-~~gw~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~d~vpV 305 (519)
+.||+..+.+.+.. ..++.+..++||.|.++.... .++. .......... ......+..+
T Consensus 160 ~asKaa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~~~~~------~~~~~~~~~~---------~~p~~r~~~p 224 (280)
T 3tox_A 160 AASKAGLIGLVQALAVELGARGIRVNALLPGGTDTPANFANLPGA------APETRGFVEG---------LHALKRIARP 224 (280)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBSSTTSGGGSTTC------CTHHHHHHHT---------TSTTSSCBCH
T ss_pred HHHHHHHHHHHHHHHHHhhhcCeEEEEEEECCCCCchhhhhcccc------CHHHHHHHhc---------cCccCCCcCH
Confidence 99999999888765 357999999999998875421 1110 1111111111 1122346789
Q ss_pred HHHHHHHHHHHHHhccCCCCCcEEEecCC
Q 010075 306 DMVVNAMIVAMVAHAKQPSDANIYHVGSS 334 (519)
Q Consensus 306 Ddva~aii~a~~~~~~~~~~~~iyni~s~ 334 (519)
+|+|++++.++..... .-.++++++.+|
T Consensus 225 edvA~~v~~L~s~~a~-~itG~~i~vdGG 252 (280)
T 3tox_A 225 EEIAEAALYLASDGAS-FVTGAALLADGG 252 (280)
T ss_dssp HHHHHHHHHHHSGGGT-TCCSCEEEESTT
T ss_pred HHHHHHHHHHhCcccc-CCcCcEEEECCC
Confidence 9999999998864332 224789999988
|
| >2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP} SCOP: c.2.1.2 PDB: 2ewm_A* | Back alignment and structure |
|---|
Probab=99.78 E-value=1.2e-17 Score=162.53 Aligned_cols=219 Identities=15% Similarity=0.137 Sum_probs=145.2
Q ss_pred cCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 010075 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (519)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (519)
+++|+|+||||||+||++++++|++.| .+|+++.|+.... ..+.+. + . ..++.+
T Consensus 5 l~~k~vlVTGas~gIG~~ia~~l~~~G---~~V~~~~r~~~~~-~~~~~~-------------~-~--------~~~~~~ 58 (249)
T 2ew8_A 5 LKDKLAVITGGANGIGRAIAERFAVEG---ADIAIADLVPAPE-AEAAIR-------------N-L--------GRRVLT 58 (249)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHTT---CEEEEEESSCCHH-HHHHHH-------------H-T--------TCCEEE
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCC---CEEEEEcCCchhH-HHHHHH-------------h-c--------CCcEEE
Confidence 678999999999999999999999998 6789999875211 111111 0 1 256889
Q ss_pred EeccCCCCCCCCChhhhHHHH-------hcCccEEEEcCccCCc-------cccHHHHHHHhHHHHHHHHHHHHh-c--c
Q 010075 90 VPGDISSEDLGLKDSNLKEEL-------WNELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKK-C--V 152 (519)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l-------~~~vdiViH~Aa~v~f-------~~~~~~~~~~Nv~gt~~ll~~a~~-~--~ 152 (519)
+.+|++++ +..+.+ ..++|+|||+||.... .+.++..+++|+.|+.++++.+.. + .
T Consensus 59 ~~~Dv~~~-------~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~ 131 (249)
T 2ew8_A 59 VKCDVSQP-------GDVEAFGKQVISTFGRCDILVNNAGIYPLIPFDELTFEQWKKTFEINVDSGFLMAKAFVPGMKRN 131 (249)
T ss_dssp EECCTTCH-------HHHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH
T ss_pred EEeecCCH-------HHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc
Confidence 99999963 222333 3479999999997542 245778899999998888777432 1 2
Q ss_pred CCceEEEEecceeecCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcHHH
Q 010075 153 KLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYV 232 (519)
Q Consensus 153 ~l~~~V~vSTa~v~~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~Y~ 232 (519)
+..++|++||...+... .....|+
T Consensus 132 ~~g~iv~isS~~~~~~~--------------------------------------------------------~~~~~Y~ 155 (249)
T 2ew8_A 132 GWGRIINLTSTTYWLKI--------------------------------------------------------EAYTHYI 155 (249)
T ss_dssp TCEEEEEECCGGGGSCC--------------------------------------------------------SSCHHHH
T ss_pred CCeEEEEEcchhhccCC--------------------------------------------------------CCchhHH
Confidence 56899999998655321 1235799
Q ss_pred HHHHHHHHHHHHh-----hcCCcEEEEecCccccCCCC-CCCcccccccccHHHHHHhhcCCceeeccCCCceeeeeeHH
Q 010075 233 FTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKE-PFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVD 306 (519)
Q Consensus 233 ~sK~~aE~lv~~~-----~~~lp~~IvRPs~V~g~~~~-p~~gw~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~d~vpVD 306 (519)
.||+..+.+.+.. ..++++.+++||.|.++... ..+. . ..... .... .....+..++
T Consensus 156 asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~---~---~~~~~----~~~~-------~~~~~~~~p~ 218 (249)
T 2ew8_A 156 STKAANIGFTRALASDLGKDGITVNAIAPSLVRTATTEASALS---A---MFDVL----PNML-------QAIPRLQVPL 218 (249)
T ss_dssp HHHHHHHHHHHHHHHHHGGGTEEEEEEEECCC----------------------------CTT-------SSSCSCCCTH
T ss_pred HHHHHHHHHHHHHHHHHHhcCcEEEEEecCcCcCccchhcccc---c---hhhHH----HHhh-------CccCCCCCHH
Confidence 9999999988765 35899999999999886532 1100 0 00000 0000 1123468899
Q ss_pred HHHHHHHHHHHHhccCCCCCcEEEecCCC
Q 010075 307 MVVNAMIVAMVAHAKQPSDANIYHVGSSL 335 (519)
Q Consensus 307 dva~aii~a~~~~~~~~~~~~iyni~s~~ 335 (519)
|+|++++.++.... ..-.++++++.+|.
T Consensus 219 dva~~~~~l~s~~~-~~~tG~~~~vdGG~ 246 (249)
T 2ew8_A 219 DLTGAAAFLASDDA-SFITGQTLAVDGGM 246 (249)
T ss_dssp HHHHHHHHHTSGGG-TTCCSCEEEESSSC
T ss_pred HHHHHHHHHcCccc-CCCCCcEEEECCCc
Confidence 99999999886432 22247889998873
|
| >2dtx_A Glucose 1-dehydrogenase related protein; rossmann fold, oxidoreductase; HET: BMA; 1.60A {Thermoplasma acidophilum} PDB: 2dtd_A* 2dte_A* 2zk7_A | Back alignment and structure |
|---|
Probab=99.78 E-value=8.8e-18 Score=165.06 Aligned_cols=215 Identities=13% Similarity=0.111 Sum_probs=147.5
Q ss_pred cCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 010075 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (519)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (519)
+++|+|+||||||+||+++++.|++.| .+|+++.|+... ..++.+
T Consensus 6 l~~k~vlVTGas~gIG~~ia~~l~~~G---~~V~~~~r~~~~--------------------------------~~~~~~ 50 (264)
T 2dtx_A 6 LRDKVVIVTGASMGIGRAIAERFVDEG---SKVIDLSIHDPG--------------------------------EAKYDH 50 (264)
T ss_dssp GTTCEEEEESCSSHHHHHHHHHHHHTT---CEEEEEESSCCC--------------------------------SCSSEE
T ss_pred cCCCEEEEeCCCCHHHHHHHHHHHHCC---CEEEEEecCccc--------------------------------CCceEE
Confidence 578999999999999999999999998 678999887532 146788
Q ss_pred EeccCCCCCCCCChhhhHHHHh-------cCccEEEEcCccCCc-------cccHHHHHHHhHHHHHHHHHHHHhc---c
Q 010075 90 VPGDISSEDLGLKDSNLKEELW-------NELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKC---V 152 (519)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~-------~~vdiViH~Aa~v~f-------~~~~~~~~~~Nv~gt~~ll~~a~~~---~ 152 (519)
+.+|++++ +..+.++ .++|+|||+||.... .+.++..+++|+.|+.++++.+.+. .
T Consensus 51 ~~~Dl~~~-------~~v~~~~~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~ 123 (264)
T 2dtx_A 51 IECDVTNP-------DQVKASIDHIFKEYGSISVLVNNAGIESYGKIESMSMGEWRRIIDVNLFGYYYASKFAIPYMIRS 123 (264)
T ss_dssp EECCTTCH-------HHHHHHHHHHHHHHSCCCEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTS
T ss_pred EEecCCCH-------HHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc
Confidence 99999963 2223333 379999999997543 2467888999999999998887542 2
Q ss_pred CCceEEEEecceeecCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcHHH
Q 010075 153 KLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYV 232 (519)
Q Consensus 153 ~l~~~V~vSTa~v~~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~Y~ 232 (519)
+..++|++||...+... .....|+
T Consensus 124 ~~g~iv~isS~~~~~~~--------------------------------------------------------~~~~~Y~ 147 (264)
T 2dtx_A 124 RDPSIVNISSVQASIIT--------------------------------------------------------KNASAYV 147 (264)
T ss_dssp SSCEEEEECCGGGTSCC--------------------------------------------------------TTBHHHH
T ss_pred CCcEEEEECCchhccCC--------------------------------------------------------CCchhHH
Confidence 45799999998654321 2245799
Q ss_pred HHHHHHHHHHHHh----hcCCcEEEEecCccccCCCCCCCcccccccccH----HHHHHhhcCCceeeccCCCceeeeee
Q 010075 233 FTKTMGEMLMQQS----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTIN----TLFVASAQGNLRCLVGETKVIMDVIP 304 (519)
Q Consensus 233 ~sK~~aE~lv~~~----~~~lp~~IvRPs~V~g~~~~p~~gw~~~~~~~~----~~i~~~~~g~~~~~~~~~~~~~d~vp 304 (519)
.||+..|.+.+.. .+.+++.+++||.|.++.......... .... ........+ .....++.
T Consensus 148 ~sK~a~~~~~~~la~e~~~~i~vn~v~PG~v~t~~~~~~~~~~~--~~~~~~~~~~~~~~~~~---------~p~~~~~~ 216 (264)
T 2dtx_A 148 TSKHAVIGLTKSIALDYAPLLRCNAVCPATIDTPLVRKAAELEV--GSDPMRIEKKISEWGHE---------HPMQRIGK 216 (264)
T ss_dssp HHHHHHHHHHHHHHHHHTTTSEEEEEEECSBCSHHHHHHHHHHH--CSCHHHHHHHHHHHHHH---------STTSSCBC
T ss_pred HHHHHHHHHHHHHHHHhcCCcEEEEEEeCCCcCcchhhhhhccc--ccCchhhHHHHHHHHhc---------CCCCCCcC
Confidence 9999999988765 223999999999986643210000000 0000 111111110 11234789
Q ss_pred HHHHHHHHHHHHHHhccCCCCCcEEEecCC
Q 010075 305 VDMVVNAMIVAMVAHAKQPSDANIYHVGSS 334 (519)
Q Consensus 305 VDdva~aii~a~~~~~~~~~~~~iyni~s~ 334 (519)
++|+|++++.++..... ...++++++.+|
T Consensus 217 p~dvA~~v~~l~s~~~~-~~tG~~i~vdGG 245 (264)
T 2dtx_A 217 PQEVASAVAFLASREAS-FITGTCLYVDGG 245 (264)
T ss_dssp HHHHHHHHHHHHSGGGT-TCCSCEEEESTT
T ss_pred HHHHHHHHHHHhCchhc-CCCCcEEEECCC
Confidence 99999999998864322 223688999877
|
| >3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans} | Back alignment and structure |
|---|
Probab=99.78 E-value=8.4e-18 Score=166.61 Aligned_cols=227 Identities=18% Similarity=0.179 Sum_probs=153.0
Q ss_pred hcCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceE
Q 010075 9 FLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKIT 88 (519)
Q Consensus 9 ~~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~ 88 (519)
-++||+|+||||+|+||+++++.|++.| .+|+++.|+... .+...+ .+++..+ ...++.
T Consensus 8 ~l~~k~vlVTGas~gIG~aia~~l~~~G---~~V~~~~r~~~~---~~~~~~---------~l~~~~~------~~~~~~ 66 (281)
T 3svt_A 8 SFQDRTYLVTGGGSGIGKGVAAGLVAAG---ASVMIVGRNPDK---LAGAVQ---------ELEALGA------NGGAIR 66 (281)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHTT---CEEEEEESCHHH---HHHHHH---------HHHTTCC------SSCEEE
T ss_pred CcCCCEEEEeCCCcHHHHHHHHHHHHCC---CEEEEEeCCHHH---HHHHHH---------HHHHhCC------CCceEE
Confidence 4679999999999999999999999998 678888886422 111111 1111100 013789
Q ss_pred EEeccCCCCCCCCChhhhHHHHh-------cCccEEEEcCccCC----c----cccHHHHHHHhHHHHHHHHHHHHhc--
Q 010075 89 FVPGDISSEDLGLKDSNLKEELW-------NELDIMVNSAAITK----F----DERYDVAFGINTLGVIHLVNFAKKC-- 151 (519)
Q Consensus 89 ~v~gDl~~~~lgls~~~~~~~l~-------~~vdiViH~Aa~v~----f----~~~~~~~~~~Nv~gt~~ll~~a~~~-- 151 (519)
++.+|++++ +..+.++ .++|++||+||... + .+.++..+++|+.|+.++++.+.+.
T Consensus 67 ~~~~Dv~~~-------~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~ 139 (281)
T 3svt_A 67 YEPTDITNE-------DETARAVDAVTAWHGRLHGVVHCAGGSENIGPITQVDSEAWRRTVDLNVNGTMYVLKHAAREMV 139 (281)
T ss_dssp EEECCTTSH-------HHHHHHHHHHHHHHSCCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEeCCCCCH-------HHHHHHHHHHHHHcCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHH
Confidence 999999963 2223333 37899999999732 1 2457788999999999999987653
Q ss_pred -cCCceEEEEecceeecCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcH
Q 010075 152 -VKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNT 230 (519)
Q Consensus 152 -~~l~~~V~vSTa~v~~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~ 230 (519)
.+-.++|++||...+... .....
T Consensus 140 ~~~~g~iv~isS~~~~~~~--------------------------------------------------------~~~~~ 163 (281)
T 3svt_A 140 RGGGGSFVGISSIAASNTH--------------------------------------------------------RWFGA 163 (281)
T ss_dssp HTTCEEEEEECCHHHHSCC--------------------------------------------------------TTCTH
T ss_pred hcCCcEEEEEeCHHHcCCC--------------------------------------------------------CCChh
Confidence 234589999998655321 22457
Q ss_pred HHHHHHHHHHHHHHh-----hcCCcEEEEecCccccCCCCCCCcccccccccHHHHHHhhcCCceeeccCCCceeeeeeH
Q 010075 231 YVFTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPV 305 (519)
Q Consensus 231 Y~~sK~~aE~lv~~~-----~~~lp~~IvRPs~V~g~~~~p~~gw~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~d~vpV 305 (519)
|+.||+..|.+.+.+ ..++++..++||.|.++..... ............+ .....+..+
T Consensus 164 Y~asK~a~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~-------~~~~~~~~~~~~~---------~p~~r~~~~ 227 (281)
T 3svt_A 164 YGVTKSAVDHLMQLAADELGASWVRVNSIRPGLIRTDLVAAI-------TESAELSSDYAMC---------TPLPRQGEV 227 (281)
T ss_dssp HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHH-------HTCHHHHHHHHHH---------CSSSSCBCH
T ss_pred HHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeCcCcCcchhhc-------ccCHHHHHHHHhc---------CCCCCCCCH
Confidence 999999999998765 4579999999999987643210 0011111111111 112345679
Q ss_pred HHHHHHHHHHHHHhccCCCCCcEEEecCCCC
Q 010075 306 DMVVNAMIVAMVAHAKQPSDANIYHVGSSLR 336 (519)
Q Consensus 306 Ddva~aii~a~~~~~~~~~~~~iyni~s~~~ 336 (519)
+|+|++++.++..... .-.++++++.+|..
T Consensus 228 ~dva~~~~~l~s~~~~-~itG~~~~vdgG~~ 257 (281)
T 3svt_A 228 EDVANMAMFLLSDAAS-FVTGQVINVDGGQM 257 (281)
T ss_dssp HHHHHHHHHHHSGGGT-TCCSCEEEESTTGG
T ss_pred HHHHHHHHHHhCcccC-CCCCCEEEeCCChh
Confidence 9999999998864332 22478999988843
|
| >4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli} | Back alignment and structure |
|---|
Probab=99.77 E-value=1.1e-17 Score=165.55 Aligned_cols=225 Identities=16% Similarity=0.176 Sum_probs=152.3
Q ss_pred cCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 010075 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (519)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (519)
++||+|+||||+|+||+++++.|++.| .+|+++.|+... .+++. ++. ..++.+
T Consensus 25 l~~k~vlVTGas~GIG~aia~~l~~~G---~~V~~~~r~~~~---~~~~~-------------~~~--------~~~~~~ 77 (277)
T 4dqx_A 25 LNQRVCIVTGGGSGIGRATAELFAKNG---AYVVVADVNEDA---AVRVA-------------NEI--------GSKAFG 77 (277)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHTT---CEEEEEESSHHH---HHHHH-------------HHH--------CTTEEE
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCC---CEEEEEeCCHHH---HHHHH-------------HHh--------CCceEE
Confidence 578999999999999999999999998 678888886421 12221 111 357889
Q ss_pred EeccCCCCCCCCChhhhHHHHh-------cCccEEEEcCccCCc-------cccHHHHHHHhHHHHHHHHHHHHhc---c
Q 010075 90 VPGDISSEDLGLKDSNLKEELW-------NELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKC---V 152 (519)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~-------~~vdiViH~Aa~v~f-------~~~~~~~~~~Nv~gt~~ll~~a~~~---~ 152 (519)
+.+|++++ +..+.++ .++|++||+||.... .+.++..+++|+.|+..+++.+... .
T Consensus 78 ~~~Dv~d~-------~~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~ 150 (277)
T 4dqx_A 78 VRVDVSSA-------KDAESMVEKTTAKWGRVDVLVNNAGFGTTGNVVTIPEETWDRIMSVNVKGIFLCSKYVIPVMRRN 150 (277)
T ss_dssp EECCTTCH-------HHHHHHHHHHHHHHSCCCEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTT
T ss_pred EEecCCCH-------HHHHHHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc
Confidence 99999963 2223333 379999999997532 2567888999999999998887542 2
Q ss_pred CCceEEEEecceeecCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcHHH
Q 010075 153 KLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYV 232 (519)
Q Consensus 153 ~l~~~V~vSTa~v~~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~Y~ 232 (519)
+..++|++||...+... .....|+
T Consensus 151 ~~g~iv~isS~~~~~~~--------------------------------------------------------~~~~~Y~ 174 (277)
T 4dqx_A 151 GGGSIINTTSYTATSAI--------------------------------------------------------ADRTAYV 174 (277)
T ss_dssp TCEEEEEECCGGGTSCC--------------------------------------------------------TTBHHHH
T ss_pred CCcEEEEECchhhCcCC--------------------------------------------------------CCChhHH
Confidence 45699999997654311 2245799
Q ss_pred HHHHHHHHHHHHh-----hcCCcEEEEecCccccCCCCCCCcccccccccHHHHHHhhcCCceeeccCCCceeeeeeHHH
Q 010075 233 FTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDM 307 (519)
Q Consensus 233 ~sK~~aE~lv~~~-----~~~lp~~IvRPs~V~g~~~~p~~gw~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~d~vpVDd 307 (519)
.||+..+.+.+.. ..++.+..++||.|.++.... .+ .............. .......+..++|
T Consensus 175 asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~--~~-~~~~~~~~~~~~~~---------~~~~~~r~~~ped 242 (277)
T 4dqx_A 175 ASKGAISSLTRAMAMDHAKEGIRVNAVAPGTIDSPYFTK--IF-AEAKDPAKLRSDFN---------ARAVMDRMGTAEE 242 (277)
T ss_dssp HHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHH--HH-HTCSCHHHHHHHHH---------TTSTTCSCBCHHH
T ss_pred HHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcCcCchhhh--hc-ccccchhHHHHHHH---------hcCcccCCcCHHH
Confidence 9999999888755 347999999999987753100 00 00001111111111 1122345678999
Q ss_pred HHHHHHHHHHHhccCCCCCcEEEecCCCCC
Q 010075 308 VVNAMIVAMVAHAKQPSDANIYHVGSSLRN 337 (519)
Q Consensus 308 va~aii~a~~~~~~~~~~~~iyni~s~~~~ 337 (519)
+|++++.++..... .-.++++++.+|...
T Consensus 243 vA~~v~~L~s~~~~-~itG~~i~vdGG~~~ 271 (277)
T 4dqx_A 243 IAEAMLFLASDRSR-FATGSILTVDGGSSI 271 (277)
T ss_dssp HHHHHHHHHSGGGT-TCCSCEEEESSSSSS
T ss_pred HHHHHHHHhCCccC-CCcCCEEEECCchhh
Confidence 99999998864332 224789999988543
|
| >3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, 3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus thuringiensis serovar kurstakorganism_taxid} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.77 E-value=9.4e-18 Score=164.45 Aligned_cols=223 Identities=13% Similarity=0.145 Sum_probs=150.5
Q ss_pred CCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEE
Q 010075 11 ENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFV 90 (519)
Q Consensus 11 ~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v 90 (519)
.+|+|+||||+|+||++++++|++.| .+|+++.|.... ..+.+.+.+ ++ ...++.++
T Consensus 6 ~~k~vlVTGas~gIG~~~a~~l~~~G---~~v~~~~~~~~~--~~~~~~~~~----------~~--------~~~~~~~~ 62 (264)
T 3i4f_A 6 FVRHALITAGTKGLGKQVTEKLLAKG---YSVTVTYHSDTT--AMETMKETY----------KD--------VEERLQFV 62 (264)
T ss_dssp CCCEEEETTTTSHHHHHHHHHHHHTT---CEEEEEESSCHH--HHHHHHHHT----------GG--------GGGGEEEE
T ss_pred ccCEEEEeCCCchhHHHHHHHHHHCC---CEEEEEcCCChH--HHHHHHHHH----------Hh--------cCCceEEE
Confidence 46899999999999999999999998 678888776432 122222110 01 12578999
Q ss_pred eccCCCCCCCCChhhhHHHHh-------cCccEEEEcCccC--C---c----cccHHHHHHHhHHHHHHHHHHH----Hh
Q 010075 91 PGDISSEDLGLKDSNLKEELW-------NELDIMVNSAAIT--K---F----DERYDVAFGINTLGVIHLVNFA----KK 150 (519)
Q Consensus 91 ~gDl~~~~lgls~~~~~~~l~-------~~vdiViH~Aa~v--~---f----~~~~~~~~~~Nv~gt~~ll~~a----~~ 150 (519)
.+|++++ +..+.++ .++|+|||+||.. . + .+.++..+++|+.|+.++++.+ ++
T Consensus 63 ~~Dl~~~-------~~v~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~ 135 (264)
T 3i4f_A 63 QADVTKK-------EDLHKIVEEAMSHFGKIDFLINNAGPYVFERKKLVDYEEDEWNEMIQGNLTAVFHLLKLVVPVMRK 135 (264)
T ss_dssp ECCTTSH-------HHHHHHHHHHHHHHSCCCEEECCCCCCCCSCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHH
T ss_pred EecCCCH-------HHHHHHHHHHHHHhCCCCEEEECCcccccCCCccccCCHHHHHHHHHhccHHHHHHHHHHHHHHHh
Confidence 9999953 3233443 3799999999942 1 1 2457888999999999999987 33
Q ss_pred ccCCceEEEEecceeecCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcH
Q 010075 151 CVKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNT 230 (519)
Q Consensus 151 ~~~l~~~V~vSTa~v~~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~ 230 (519)
.+..++|++||..+.+... ......
T Consensus 136 -~~~g~iv~iss~~~~~~~~------------------------------------------------------~~~~~~ 160 (264)
T 3i4f_A 136 -QNFGRIINYGFQGADSAPG------------------------------------------------------WIYRSA 160 (264)
T ss_dssp -HTCEEEEEECCTTGGGCCC------------------------------------------------------CTTCHH
T ss_pred -cCCCeEEEEeechhcccCC------------------------------------------------------CCCCch
Confidence 2567999999875432211 023467
Q ss_pred HHHHHHHHHHHHHHh-----hcCCcEEEEecCccccCCCCCCCcccccccccHHHHHHhhcCCceeeccCCCceeeeeeH
Q 010075 231 YVFTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPV 305 (519)
Q Consensus 231 Y~~sK~~aE~lv~~~-----~~~lp~~IvRPs~V~g~~~~p~~gw~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~d~vpV 305 (519)
|+.||+..+.+++.. ..++++.+++||.|.++...... ....... ........+..+
T Consensus 161 Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~---------~~~~~~~---------~~~~p~~r~~~~ 222 (264)
T 3i4f_A 161 FAAAKVGLVSLTKTVAYEEAEYGITANMVCPGDIIGEMKEATI---------QEARQLK---------EHNTPIGRSGTG 222 (264)
T ss_dssp HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCGGGGSCCH---------HHHHHC-----------------CCCCH
T ss_pred hHHHHHHHHHHHHHHHHHhhhcCcEEEEEccCCccCccchhcc---------HHHHHHH---------hhcCCCCCCcCH
Confidence 999999999888755 35799999999999887543211 1111100 111223346789
Q ss_pred HHHHHHHHHHHHHhccCCCCCcEEEecCCCCC
Q 010075 306 DMVVNAMIVAMVAHAKQPSDANIYHVGSSLRN 337 (519)
Q Consensus 306 Ddva~aii~a~~~~~~~~~~~~iyni~s~~~~ 337 (519)
+|+|++++.++..... .-.++++++.+|...
T Consensus 223 ~dva~~v~~l~s~~~~-~itG~~i~vdGG~~~ 253 (264)
T 3i4f_A 223 EDIARTISFLCEDDSD-MITGTIIEVTGAVDV 253 (264)
T ss_dssp HHHHHHHHHHHSGGGT-TCCSCEEEESCSCCC
T ss_pred HHHHHHHHHHcCcccC-CCCCcEEEEcCceee
Confidence 9999999998864332 224789999988543
|
| >2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis} | Back alignment and structure |
|---|
Probab=99.77 E-value=1.7e-17 Score=161.10 Aligned_cols=221 Identities=16% Similarity=0.188 Sum_probs=147.7
Q ss_pred cCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 010075 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (519)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (519)
++||+|+||||||+||++++++|++.| .+|+++.|.... ..+.+.++ +++. ..++.+
T Consensus 2 l~~k~vlVTGas~giG~~ia~~l~~~G---~~V~~~~r~~~~--~~~~~~~~---------~~~~---------~~~~~~ 58 (246)
T 2uvd_A 2 LKGKVALVTGASRGIGRAIAIDLAKQG---ANVVVNYAGNEQ--KANEVVDE---------IKKL---------GSDAIA 58 (246)
T ss_dssp CTTCEEEETTCSSHHHHHHHHHHHHTT---CEEEEEESSCHH--HHHHHHHH---------HHHT---------TCCEEE
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCC---CEEEEEeCCCHH--HHHHHHHH---------HHhc---------CCcEEE
Confidence 468999999999999999999999998 678888884211 11222111 1111 246889
Q ss_pred EeccCCCCCCCCChhhhHHHHh-------cCccEEEEcCccCCc-------cccHHHHHHHhHHHHHHHHHHHHhc---c
Q 010075 90 VPGDISSEDLGLKDSNLKEELW-------NELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKC---V 152 (519)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~-------~~vdiViH~Aa~v~f-------~~~~~~~~~~Nv~gt~~ll~~a~~~---~ 152 (519)
+.+|++++ +..+.++ .++|++||+||.... .+.++..+++|+.|+.++.+.+.+. .
T Consensus 59 ~~~D~~~~-------~~~~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~ 131 (246)
T 2uvd_A 59 VRADVANA-------EDVTNMVKQTVDVFGQVDILVNNAGVTKDNLLMRMKEEEWDTVINTNLKGVFLCTKAVSRFMMRQ 131 (246)
T ss_dssp EECCTTCH-------HHHHHHHHHHHHHHSCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH
T ss_pred EEcCCCCH-------HHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc
Confidence 99999963 2233433 379999999997542 2467788999999977777665431 2
Q ss_pred CCceEEEEecceeecCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcHHH
Q 010075 153 KLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYV 232 (519)
Q Consensus 153 ~l~~~V~vSTa~v~~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~Y~ 232 (519)
+..++|++||....... .....|+
T Consensus 132 ~~g~iv~isS~~~~~~~--------------------------------------------------------~~~~~Y~ 155 (246)
T 2uvd_A 132 RHGRIVNIASVVGVTGN--------------------------------------------------------PGQANYV 155 (246)
T ss_dssp TCEEEEEECCTHHHHCC--------------------------------------------------------TTBHHHH
T ss_pred CCcEEEEECCHHhcCCC--------------------------------------------------------CCCchHH
Confidence 56899999997543211 1235799
Q ss_pred HHHHHHHHHHHHh-----hcCCcEEEEecCccccCCCCCCCcccccccccHHHHHHhhcCCceeeccCCCceeeeeeHHH
Q 010075 233 FTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDM 307 (519)
Q Consensus 233 ~sK~~aE~lv~~~-----~~~lp~~IvRPs~V~g~~~~p~~gw~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~d~vpVDd 307 (519)
.||+..+.+.+.. ..++++.+++||.|.++.....+ . .......... ....+++++|
T Consensus 156 asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~---~------~~~~~~~~~~---------p~~~~~~~~d 217 (246)
T 2uvd_A 156 AAKAGVIGLTKTSAKELASRNITVNAIAPGFIATDMTDVLD---E------NIKAEMLKLI---------PAAQFGEAQD 217 (246)
T ss_dssp HHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBGGGCSSCCC---T------THHHHHHHTC---------TTCSCBCHHH
T ss_pred HHHHHHHHHHHHHHHHhhhcCeEEEEEEeccccCcchhhcC---H------HHHHHHHhcC---------CCCCCcCHHH
Confidence 9999888887654 45899999999999876532211 0 0111111110 1124789999
Q ss_pred HHHHHHHHHHHhccCCCCCcEEEecCCC
Q 010075 308 VVNAMIVAMVAHAKQPSDANIYHVGSSL 335 (519)
Q Consensus 308 va~aii~a~~~~~~~~~~~~iyni~s~~ 335 (519)
+|++++.++..... .-.++++++.+|.
T Consensus 218 vA~~~~~l~s~~~~-~~tG~~~~vdgG~ 244 (246)
T 2uvd_A 218 IANAVTFFASDQSK-YITGQTLNVDGGM 244 (246)
T ss_dssp HHHHHHHHHSGGGT-TCCSCEEEESTTS
T ss_pred HHHHHHHHcCchhc-CCCCCEEEECcCc
Confidence 99999998853322 2236889998773
|
| >3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus} | Back alignment and structure |
|---|
Probab=99.77 E-value=2.3e-17 Score=164.69 Aligned_cols=224 Identities=13% Similarity=0.034 Sum_probs=153.5
Q ss_pred cCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 010075 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (519)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (519)
++||+|+||||+|+||+++++.|++.| .+|+++.|+..... .+.+++ ++. ...++.+
T Consensus 39 l~~k~vlVTGas~GIG~aia~~la~~G---~~V~~~~r~~~~~~---~~~~~l---------~~~--------~~~~~~~ 95 (293)
T 3rih_A 39 LSARSVLVTGGTKGIGRGIATVFARAG---ANVAVAARSPRELS---SVTAEL---------GEL--------GAGNVIG 95 (293)
T ss_dssp CTTCEEEETTTTSHHHHHHHHHHHHTT---CEEEEEESSGGGGH---HHHHHH---------TTS--------SSSCEEE
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCC---CEEEEEECCHHHHH---HHHHHH---------Hhh--------CCCcEEE
Confidence 578999999999999999999999998 68899998754321 111111 110 1257899
Q ss_pred EeccCCCCCCCCChhhhHHHH-------hcCccEEEEcCccCCc-------cccHHHHHHHhHHHHHHHHHHHHh---cc
Q 010075 90 VPGDISSEDLGLKDSNLKEEL-------WNELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKK---CV 152 (519)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l-------~~~vdiViH~Aa~v~f-------~~~~~~~~~~Nv~gt~~ll~~a~~---~~ 152 (519)
+.+|++++ +..+.+ ..++|++||+||.... .+.++..+++|+.|+.++++.+.. ..
T Consensus 96 ~~~Dv~d~-------~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~ 168 (293)
T 3rih_A 96 VRLDVSDP-------GSCADAARTVVDAFGALDVVCANAGIFPEARLDTMTPEQLSEVLDVNVKGTVYTVQACLAPLTAS 168 (293)
T ss_dssp EECCTTCH-------HHHHHHHHHHHHHHSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHH
T ss_pred EEEeCCCH-------HHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc
Confidence 99999963 222233 2478999999997642 256788899999999999998742 12
Q ss_pred CCceEEEEecceeecCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcHHH
Q 010075 153 KLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYV 232 (519)
Q Consensus 153 ~l~~~V~vSTa~v~~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~Y~ 232 (519)
+..++|++||....... + .....|+
T Consensus 169 ~~g~iV~isS~~~~~~~--------~-----------------------------------------------~~~~~Y~ 193 (293)
T 3rih_A 169 GRGRVILTSSITGPVTG--------Y-----------------------------------------------PGWSHYG 193 (293)
T ss_dssp SSCEEEEECCSBTTTBB--------C-----------------------------------------------TTCHHHH
T ss_pred CCCEEEEEeChhhccCC--------C-----------------------------------------------CCCHHHH
Confidence 56799999997542100 0 2245799
Q ss_pred HHHHHHHHHHHHh-----hcCCcEEEEecCccccCCCCCCCcccccccccHHHHHHhhcCCceeeccCCCceeeeeeHHH
Q 010075 233 FTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDM 307 (519)
Q Consensus 233 ~sK~~aE~lv~~~-----~~~lp~~IvRPs~V~g~~~~p~~gw~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~d~vpVDd 307 (519)
.||+..+.+.+.+ ..++++..++||.|.++..... ............ ....+...+|
T Consensus 194 asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~---------~~~~~~~~~~~~---------p~~r~~~p~d 255 (293)
T 3rih_A 194 ASKAAQLGFMRTAAIELAPRGVTVNAILPGNILTEGLVDM---------GEEYISGMARSI---------PMGMLGSPVD 255 (293)
T ss_dssp HHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCHHHHHT---------CHHHHHHHHTTS---------TTSSCBCHHH
T ss_pred HHHHHHHHHHHHHHHHHhhhCeEEEEEecCCCcCcchhhc---------cHHHHHHHHhcC---------CCCCCCCHHH
Confidence 9999999888754 3589999999999988643111 112222222221 1123457899
Q ss_pred HHHHHHHHHHHhccCCCCCcEEEecCCCCC
Q 010075 308 VVNAMIVAMVAHAKQPSDANIYHVGSSLRN 337 (519)
Q Consensus 308 va~aii~a~~~~~~~~~~~~iyni~s~~~~ 337 (519)
+|++++.++..... .-.++++++.+|...
T Consensus 256 vA~~v~fL~s~~a~-~itG~~i~vdGG~~~ 284 (293)
T 3rih_A 256 IGHLAAFLATDEAG-YITGQAIVVDGGQVL 284 (293)
T ss_dssp HHHHHHHHHSGGGT-TCCSCEEEESTTTTC
T ss_pred HHHHHHHHhCcccc-CCCCCEEEECCCccC
Confidence 99999988864332 224789999888554
|
| >3ctm_A Carbonyl reductase; alcohol dehydrogenase, short-chain dehydrogenases/reductases (SDR), X-RAY crystallography, oxidoreductase; 2.69A {Candida parapsilosis} | Back alignment and structure |
|---|
Probab=99.77 E-value=1.6e-17 Score=164.23 Aligned_cols=220 Identities=12% Similarity=0.063 Sum_probs=148.6
Q ss_pred cCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 010075 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (519)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (519)
+++|+|+||||+|+||++++++|++.| .+|+++.|+..... .+.+++ . .. ..++.+
T Consensus 32 l~~k~vlITGasggIG~~la~~L~~~G---~~V~~~~r~~~~~~---~~~~~~---------~-~~--------~~~~~~ 87 (279)
T 3ctm_A 32 LKGKVASVTGSSGGIGWAVAEAYAQAG---ADVAIWYNSHPADE---KAEHLQ---------K-TY--------GVHSKA 87 (279)
T ss_dssp CTTCEEEETTTTSSHHHHHHHHHHHHT---CEEEEEESSSCCHH---HHHHHH---------H-HH--------CSCEEE
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCC---CEEEEEeCCHHHHH---HHHHHH---------H-hc--------CCcceE
Confidence 678999999999999999999999998 67899999764422 121111 0 01 256889
Q ss_pred EeccCCCCCCCCChhhhHHHHh-------cCccEEEEcCccCCc------c---ccHHHHHHHhHHH----HHHHHHHHH
Q 010075 90 VPGDISSEDLGLKDSNLKEELW-------NELDIMVNSAAITKF------D---ERYDVAFGINTLG----VIHLVNFAK 149 (519)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~-------~~vdiViH~Aa~v~f------~---~~~~~~~~~Nv~g----t~~ll~~a~ 149 (519)
+.+|++++ +..+.++ .++|+|||+||.... . +.++..+++|+.| ++.+++.++
T Consensus 88 ~~~Dl~~~-------~~~~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~ 160 (279)
T 3ctm_A 88 YKCNISDP-------KSVEETISQQEKDFGTIDVFVANAGVTWTQGPEIDVDNYDSWNKIISVDLNGVYYCSHNIGKIFK 160 (279)
T ss_dssp EECCTTCH-------HHHHHHHHHHHHHHSCCSEEEECGGGSTTC--CCCSSHHHHHHHHHHHHTHHHHHHHHHHHHHHH
T ss_pred EEeecCCH-------HHHHHHHHHHHHHhCCCCEEEECCcccccCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHH
Confidence 99999953 2223333 359999999997543 2 3466789999999 556666666
Q ss_pred hccCCceEEEEecceeecCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCc
Q 010075 150 KCVKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPN 229 (519)
Q Consensus 150 ~~~~l~~~V~vSTa~v~~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n 229 (519)
+. +.++||++||...+.... .....
T Consensus 161 ~~-~~~~iv~isS~~~~~~~~------------------------------------------------------~~~~~ 185 (279)
T 3ctm_A 161 KN-GKGSLIITSSISGKIVNI------------------------------------------------------PQLQA 185 (279)
T ss_dssp HH-TCCEEEEECCCTTSCC---------------------------------------------------------CCHH
T ss_pred hc-CCCeEEEECchHhccCCC------------------------------------------------------CCCcc
Confidence 64 678999999986432100 02235
Q ss_pred HHHHHHHHHHHHHHHh-----hcCCcEEEEecCccccCCCCCCCcccccccccHHHHHHhhcCCceeeccCCCceeeeee
Q 010075 230 TYVFTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIP 304 (519)
Q Consensus 230 ~Y~~sK~~aE~lv~~~-----~~~lp~~IvRPs~V~g~~~~p~~gw~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~d~vp 304 (519)
.|+.||+..|.+++.+ ..+ .+.+++||.|.++..... ........... . ....+++
T Consensus 186 ~Y~~sK~a~~~~~~~la~e~~~~~-~v~~v~Pg~v~t~~~~~~---------~~~~~~~~~~~----~-----p~~~~~~ 246 (279)
T 3ctm_A 186 PYNTAKAACTHLAKSLAIEWAPFA-RVNTISPGYIDTDITDFA---------SKDMKAKWWQL----T-----PLGREGL 246 (279)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTTTC-EEEEEEECSBSSTTTSSC---------CHHHHHHHHHH----S-----TTCSCBC
T ss_pred cHHHHHHHHHHHHHHHHHHhcccC-CEEEEeccCCcccccccc---------ChHHHHHHHHh----C-----CccCCcC
Confidence 7999999999998865 235 899999999987643211 11111111110 0 1124788
Q ss_pred HHHHHHHHHHHHHHhccCCCCCcEEEecCCC
Q 010075 305 VDMVVNAMIVAMVAHAKQPSDANIYHVGSSL 335 (519)
Q Consensus 305 VDdva~aii~a~~~~~~~~~~~~iyni~s~~ 335 (519)
++|+|++++.++..... .-.++++++.+|.
T Consensus 247 ~~dvA~~~~~l~s~~~~-~~tG~~i~vdgG~ 276 (279)
T 3ctm_A 247 TQELVGGYLYLASNAST-FTTGSDVVIDGGY 276 (279)
T ss_dssp GGGTHHHHHHHHSGGGT-TCCSCEEEESTTC
T ss_pred HHHHHHHHHHHhCcccc-CccCCEEEECCCe
Confidence 99999999998864322 2246899998874
|
| >4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A | Back alignment and structure |
|---|
Probab=99.77 E-value=1.9e-17 Score=161.87 Aligned_cols=226 Identities=15% Similarity=0.162 Sum_probs=155.0
Q ss_pred cCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 010075 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (519)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (519)
++||+++||||+|+||++++++|++.| .+|+++.|+... .+++. ++. ..++.+
T Consensus 6 l~gk~~lVTGas~gIG~a~a~~l~~~G---~~V~~~~r~~~~---~~~~~-------------~~~--------~~~~~~ 58 (255)
T 4eso_A 6 YQGKKAIVIGGTHGMGLATVRRLVEGG---AEVLLTGRNESN---IARIR-------------EEF--------GPRVHA 58 (255)
T ss_dssp TTTCEEEEETCSSHHHHHHHHHHHHTT---CEEEEEESCHHH---HHHHH-------------HHH--------GGGEEE
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCC---CEEEEEeCCHHH---HHHHH-------------HHh--------CCcceE
Confidence 678999999999999999999999998 678999886321 22222 111 257889
Q ss_pred EeccCCCCCCCCChhhhHHHH-------hcCccEEEEcCccCCc-------cccHHHHHHHhHHHHHHHHHHHHhc-cCC
Q 010075 90 VPGDISSEDLGLKDSNLKEEL-------WNELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKC-VKL 154 (519)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l-------~~~vdiViH~Aa~v~f-------~~~~~~~~~~Nv~gt~~ll~~a~~~-~~l 154 (519)
+.+|++++ +..+.+ ..++|++||+||.... .+.++..+++|+.|+..+++.+... .+-
T Consensus 59 ~~~Dv~~~-------~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~ 131 (255)
T 4eso_A 59 LRSDIADL-------NEIAVLGAAAGQTLGAIDLLHINAGVSELEPFDQVSEASYDRQFAVNTKGAFFTVQRLTPLIREG 131 (255)
T ss_dssp EECCTTCH-------HHHHHHHHHHHHHHSSEEEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEE
T ss_pred EEccCCCH-------HHHHHHHHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhcC
Confidence 99999963 222232 2479999999998642 2567888999999999999998763 233
Q ss_pred ceEEEEecceeecCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcHHHHH
Q 010075 155 KVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFT 234 (519)
Q Consensus 155 ~~~V~vSTa~v~~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~Y~~s 234 (519)
.++|++||...+... +....|+.|
T Consensus 132 g~iv~isS~~~~~~~--------------------------------------------------------~~~~~Y~as 155 (255)
T 4eso_A 132 GSIVFTSSVADEGGH--------------------------------------------------------PGMSVYSAS 155 (255)
T ss_dssp EEEEEECCGGGSSBC--------------------------------------------------------TTBHHHHHH
T ss_pred CEEEEECChhhcCCC--------------------------------------------------------CCchHHHHH
Confidence 589999998654321 224579999
Q ss_pred HHHHHHHHHHh-----hcCCcEEEEecCccccCCCCCCCcccccccccHHHHHHhhcCCceeeccCCCceeeeeeHHHHH
Q 010075 235 KTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVV 309 (519)
Q Consensus 235 K~~aE~lv~~~-----~~~lp~~IvRPs~V~g~~~~p~~gw~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~d~vpVDdva 309 (519)
|+..+.+.+.. ..++++..++||.|.++..... ++.+. ....+...... ......+..++|+|
T Consensus 156 Kaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~-~~~~~--~~~~~~~~~~~---------~~p~~r~~~pedvA 223 (255)
T 4eso_A 156 KAALVSFASVLAAELLPRGIRVNSVSPGFIDTPTKGVA-GITEA--ERAEFKTLGDN---------ITPMKRNGTADEVA 223 (255)
T ss_dssp HHHHHHHHHHHHHHTGGGTCEEEEEEECSBCCSSTTCT-TSCHH--HHHHHHHHHHH---------HSTTSSCBCHHHHH
T ss_pred HHHHHHHHHHHHHHHhhhCcEEEEEecCcccCcccccc-cCChh--hHHHHHHHHhc---------cCCCCCCcCHHHHH
Confidence 99999888754 3489999999999988754211 11110 00011111111 01123457899999
Q ss_pred HHHHHHHHHhccCCCCCcEEEecCCCCCch
Q 010075 310 NAMIVAMVAHAKQPSDANIYHVGSSLRNPV 339 (519)
Q Consensus 310 ~aii~a~~~~~~~~~~~~iyni~s~~~~~i 339 (519)
++++.++.. ...-.++++++.+|...++
T Consensus 224 ~~v~~L~s~--~~~itG~~i~vdGG~~~~l 251 (255)
T 4eso_A 224 RAVLFLAFE--ATFTTGAKLAVDGGLGQKL 251 (255)
T ss_dssp HHHHHHHHT--CTTCCSCEEEESTTTTTTB
T ss_pred HHHHHHcCc--CcCccCCEEEECCCccccC
Confidence 999988864 2223478999999866543
|
| >3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis} | Back alignment and structure |
|---|
Probab=99.77 E-value=1.5e-17 Score=163.34 Aligned_cols=221 Identities=15% Similarity=0.138 Sum_probs=149.4
Q ss_pred cCCCEEEEeCCcc-HHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceE
Q 010075 10 LENKTILVSGVTG-FVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKIT 88 (519)
Q Consensus 10 ~~~k~VlITGaTG-FlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~ 88 (519)
++||+|+|||||| .||++++++|++.| .+|+++.|+... .+++.+ .+++. ...++.
T Consensus 20 l~~k~vlITGasg~GIG~~~a~~l~~~G---~~V~~~~r~~~~---~~~~~~---------~l~~~--------~~~~~~ 76 (266)
T 3o38_A 20 LKGKVVLVTAAAGTGIGSTTARRALLEG---ADVVISDYHERR---LGETRD---------QLADL--------GLGRVE 76 (266)
T ss_dssp TTTCEEEESSCSSSSHHHHHHHHHHHTT---CEEEEEESCHHH---HHHHHH---------HHHTT--------CSSCEE
T ss_pred CCCCEEEEECCCCCchHHHHHHHHHHCC---CEEEEecCCHHH---HHHHHH---------HHHhc--------CCCceE
Confidence 6899999999998 59999999999998 678898887432 112211 11111 135799
Q ss_pred EEeccCCCCCCCCChhhhHHHHh-------cCccEEEEcCccCCc-------cccHHHHHHHhHHHHHHHHHHHHhc---
Q 010075 89 FVPGDISSEDLGLKDSNLKEELW-------NELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKC--- 151 (519)
Q Consensus 89 ~v~gDl~~~~lgls~~~~~~~l~-------~~vdiViH~Aa~v~f-------~~~~~~~~~~Nv~gt~~ll~~a~~~--- 151 (519)
++.+|++++ +..+.++ .++|+|||+||.... .+.++..+++|+.|+.++++.+...
T Consensus 77 ~~~~Dl~~~-------~~v~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~ 149 (266)
T 3o38_A 77 AVVCDVTST-------EAVDALITQTVEKAGRLDVLVNNAGLGGQTPVVDMTDEEWDRVLNVTLTSVMRATRAALRYFRG 149 (266)
T ss_dssp EEECCTTCH-------HHHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHT
T ss_pred EEEeCCCCH-------HHHHHHHHHHHHHhCCCcEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHh
Confidence 999999963 2223333 378999999997542 2467888999999999999887653
Q ss_pred -cCCceEEEEecceeecCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcH
Q 010075 152 -VKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNT 230 (519)
Q Consensus 152 -~~l~~~V~vSTa~v~~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~ 230 (519)
++..++|++||...+... .....
T Consensus 150 ~~~~~~iv~~sS~~~~~~~--------------------------------------------------------~~~~~ 173 (266)
T 3o38_A 150 VDHGGVIVNNASVLGWRAQ--------------------------------------------------------HSQSH 173 (266)
T ss_dssp SSCCEEEEEECCGGGTCCC--------------------------------------------------------TTCHH
T ss_pred cCCCeEEEEeCCHHHcCCC--------------------------------------------------------CCCch
Confidence 245689999997654211 22467
Q ss_pred HHHHHHHHHHHHHHh-----hcCCcEEEEecCccccCCCCCCCcccccccccHHHHHHhhcCCceeeccCCCceeeeeeH
Q 010075 231 YVFTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPV 305 (519)
Q Consensus 231 Y~~sK~~aE~lv~~~-----~~~lp~~IvRPs~V~g~~~~p~~gw~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~d~vpV 305 (519)
|+.||+..+.+++.. ..++.+..++||.|.++....... ...... .........+.++
T Consensus 174 Y~~sKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~--------~~~~~~---------~~~~~~~~r~~~~ 236 (266)
T 3o38_A 174 YAAAKAGVMALTRCSAIEAVEFGVRINAVSPSIARHKFLEKTSS--------SELLDR---------LASDEAFGRAAEP 236 (266)
T ss_dssp HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCC----------------------------------CCTTSSCCCH
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCcEEEEEeCCcccchhhhccCc--------HHHHHH---------HHhcCCcCCCCCH
Confidence 999999999998755 357999999999998765321100 000100 1112233456889
Q ss_pred HHHHHHHHHHHHHhccCCCCCcEEEecCC
Q 010075 306 DMVVNAMIVAMVAHAKQPSDANIYHVGSS 334 (519)
Q Consensus 306 Ddva~aii~a~~~~~~~~~~~~iyni~s~ 334 (519)
+|+|++++.++..... .-.++++++.+|
T Consensus 237 ~dva~~i~~l~s~~~~-~~tG~~i~vdgG 264 (266)
T 3o38_A 237 WEVAATIAFLASDYSS-YMTGEVVSVSSQ 264 (266)
T ss_dssp HHHHHHHHHHHSGGGT-TCCSCEEEESSC
T ss_pred HHHHHHHHHHcCcccc-CccCCEEEEcCC
Confidence 9999999998864332 224789999887
|
| >1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.77 E-value=1e-17 Score=167.66 Aligned_cols=229 Identities=12% Similarity=0.136 Sum_probs=151.0
Q ss_pred hhcCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCce
Q 010075 8 EFLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKI 87 (519)
Q Consensus 8 ~~~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v 87 (519)
..+++|+|+||||||+||++++++|++.| .+|+++.|+... .+.+. +.++...+ .....++
T Consensus 14 ~~l~~k~vlVTGasggIG~~la~~l~~~G---~~V~~~~r~~~~---~~~~~---------~~l~~~~~----~~~~~~~ 74 (303)
T 1yxm_A 14 GLLQGQVAIVTGGATGIGKAIVKELLELG---SNVVIASRKLER---LKSAA---------DELQANLP----PTKQARV 74 (303)
T ss_dssp TTTTTCEEEEETTTSHHHHHHHHHHHHTT---CEEEEEESCHHH---HHHHH---------HHHHHTSC----TTCCCCE
T ss_pred CCCCCCEEEEECCCcHHHHHHHHHHHHCC---CEEEEEeCCHHH---HHHHH---------HHHHhhcc----ccCCccE
Confidence 35788999999999999999999999998 678999886421 11211 11111110 0013578
Q ss_pred EEEeccCCCCCCCCChhhhHHHHh-------cCccEEEEcCccCCc-------cccHHHHHHHhHHHHHHHHHHHHhc--
Q 010075 88 TFVPGDISSEDLGLKDSNLKEELW-------NELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKC-- 151 (519)
Q Consensus 88 ~~v~gDl~~~~lgls~~~~~~~l~-------~~vdiViH~Aa~v~f-------~~~~~~~~~~Nv~gt~~ll~~a~~~-- 151 (519)
.++.+|++++ +..+.++ .++|+|||+||.... .+.++..+++|+.|+.++++++...
T Consensus 75 ~~~~~D~~~~-------~~v~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~ 147 (303)
T 1yxm_A 75 IPIQCNIRNE-------EEVNNLVKSTLDTFGKINFLVNNGGGQFLSPAEHISSKGWHAVLETNLTGTFYMCKAVYSSWM 147 (303)
T ss_dssp EEEECCTTCH-------HHHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTH
T ss_pred EEEecCCCCH-------HHHHHHHHHHHHHcCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHH
Confidence 9999999953 2233433 369999999996432 2456788999999999999998652
Q ss_pred -cCCceEEEEecceeecCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcH
Q 010075 152 -VKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNT 230 (519)
Q Consensus 152 -~~l~~~V~vSTa~v~~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~ 230 (519)
.+..++|++||....+. .....
T Consensus 148 ~~~~~~iv~isS~~~~~~---------------------------------------------------------~~~~~ 170 (303)
T 1yxm_A 148 KEHGGSIVNIIVPTKAGF---------------------------------------------------------PLAVH 170 (303)
T ss_dssp HHHCEEEEEECCCCTTCC---------------------------------------------------------TTCHH
T ss_pred HhcCCeEEEEEeecccCC---------------------------------------------------------Ccchh
Confidence 23478999999862110 12356
Q ss_pred HHHHHHHHHHHHHHh-----hcCCcEEEEecCccccCCC-CCCCcccccccccHHHHHHhhcCCceeeccCCCceeeeee
Q 010075 231 YVFTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYK-EPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIP 304 (519)
Q Consensus 231 Y~~sK~~aE~lv~~~-----~~~lp~~IvRPs~V~g~~~-~p~~gw~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~d~vp 304 (519)
|+.+|+..+.+.+.. ..+++++++|||.|+++.. .....+.. ........ .. ....++.
T Consensus 171 Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~------~~~~~~~~----~~-----p~~~~~~ 235 (303)
T 1yxm_A 171 SGAARAGVYNLTKSLALEWACSGIRINCVAPGVIYSQTAVENYGSWGQ------SFFEGSFQ----KI-----PAKRIGV 235 (303)
T ss_dssp HHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCCTGGGTTSGGGGG------GGGTTGGG----GS-----TTSSCBC
T ss_pred hHHHHHHHHHHHHHHHHHhcccCeEEEEEecCCcccchhhhhccccch------HHHHHHHh----cC-----cccCCCC
Confidence 999999888887754 3489999999999999732 11111111 00000000 01 1124788
Q ss_pred HHHHHHHHHHHHHHhccCCCCCcEEEecCCC
Q 010075 305 VDMVVNAMIVAMVAHAKQPSDANIYHVGSSL 335 (519)
Q Consensus 305 VDdva~aii~a~~~~~~~~~~~~iyni~s~~ 335 (519)
++|+|++++.++.... ....++++++.+|.
T Consensus 236 ~~dvA~~i~~l~~~~~-~~~~G~~~~v~gG~ 265 (303)
T 1yxm_A 236 PEEVSSVVCFLLSPAA-SFITGQSVDVDGGR 265 (303)
T ss_dssp THHHHHHHHHHHSGGG-TTCCSCEEEESTTG
T ss_pred HHHHHHHHHHHhCccc-ccCCCcEEEECCCe
Confidence 9999999999885432 22247899998874
|
| >3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.77 E-value=3.2e-17 Score=161.72 Aligned_cols=221 Identities=13% Similarity=0.057 Sum_probs=150.2
Q ss_pred cCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 010075 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (519)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (519)
++||+++||||+|+||++++++|++.| .+|+++.|.... ..+.+.++ +++ ...++.+
T Consensus 29 l~gk~~lVTGas~GIG~aia~~la~~G---~~V~~~~~~~~~--~~~~~~~~---------l~~---------~~~~~~~ 85 (271)
T 3v2g_A 29 LAGKTAFVTGGSRGIGAAIAKRLALEG---AAVALTYVNAAE--RAQAVVSE---------IEQ---------AGGRAVA 85 (271)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTT---CEEEEEESSCHH--HHHHHHHH---------HHH---------TTCCEEE
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCC---CEEEEEeCCCHH--HHHHHHHH---------HHh---------cCCcEEE
Confidence 678999999999999999999999998 677777665321 12222211 111 1257889
Q ss_pred EeccCCCCCCCCChhhhHHHHh-------cCccEEEEcCccCCc-------cccHHHHHHHhHHHHHHHHHHHHhc-cCC
Q 010075 90 VPGDISSEDLGLKDSNLKEELW-------NELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKC-VKL 154 (519)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~-------~~vdiViH~Aa~v~f-------~~~~~~~~~~Nv~gt~~ll~~a~~~-~~l 154 (519)
+.+|++++ +..+.++ .++|++||+||.... .+.++..+++|+.|+..+++.+.+. .+-
T Consensus 86 ~~~Dv~d~-------~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~ 158 (271)
T 3v2g_A 86 IRADNRDA-------EAIEQAIRETVEALGGLDILVNSAGIWHSAPLEETTVADFDEVMAVNFRAPFVAIRSASRHLGDG 158 (271)
T ss_dssp EECCTTCH-------HHHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCTT
T ss_pred EECCCCCH-------HHHHHHHHHHHHHcCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcC
Confidence 99999963 3233333 379999999997542 2567888999999999999988653 345
Q ss_pred ceEEEEecceeecCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcHHHHH
Q 010075 155 KVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFT 234 (519)
Q Consensus 155 ~~~V~vSTa~v~~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~Y~~s 234 (519)
.++|++||....... . .....|+.|
T Consensus 159 g~iv~isS~~~~~~~--------~-----------------------------------------------~~~~~Y~as 183 (271)
T 3v2g_A 159 GRIITIGSNLAELVP--------W-----------------------------------------------PGISLYSAS 183 (271)
T ss_dssp CEEEEECCGGGTCCC--------S-----------------------------------------------TTCHHHHHH
T ss_pred CEEEEEeChhhccCC--------C-----------------------------------------------CCchHHHHH
Confidence 689999985332100 0 224579999
Q ss_pred HHHHHHHHHHh-----hcCCcEEEEecCccccCCCCCCCcccccccccHHHHHHhhcCCceeeccCCCceeeeeeHHHHH
Q 010075 235 KTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVV 309 (519)
Q Consensus 235 K~~aE~lv~~~-----~~~lp~~IvRPs~V~g~~~~p~~gw~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~d~vpVDdva 309 (519)
|+..+.+.+.. ..++++..++||.|.++.....+.+. .... ... ....+...+|+|
T Consensus 184 Kaa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~~~~~------~~~~----~~~---------~~~r~~~pedvA 244 (271)
T 3v2g_A 184 KAALAGLTKGLARDLGPRGITVNIVHPGSTDTDMNPADGDHA------EAQR----ERI---------ATGSYGEPQDIA 244 (271)
T ss_dssp HHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSSSSCSSCSSH------HHHH----HTC---------TTSSCBCHHHHH
T ss_pred HHHHHHHHHHHHHHhhhhCeEEEEEecCCCcCCcccccchhH------HHHH----hcC---------CCCCCCCHHHHH
Confidence 99999887754 35899999999999887543211111 1111 110 112356789999
Q ss_pred HHHHHHHHHhccCCCCCcEEEecCCC
Q 010075 310 NAMIVAMVAHAKQPSDANIYHVGSSL 335 (519)
Q Consensus 310 ~aii~a~~~~~~~~~~~~iyni~s~~ 335 (519)
++++.++..... .-.++++++.+|.
T Consensus 245 ~~v~fL~s~~~~-~itG~~i~vdGG~ 269 (271)
T 3v2g_A 245 GLVAWLAGPQGK-FVTGASLTIDGGA 269 (271)
T ss_dssp HHHHHHHSGGGT-TCCSCEEEESTTT
T ss_pred HHHHHHhCcccC-CccCCEEEeCcCc
Confidence 999988864322 2247899998773
|
| >3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A | Back alignment and structure |
|---|
Probab=99.77 E-value=6.3e-18 Score=166.33 Aligned_cols=217 Identities=14% Similarity=0.127 Sum_probs=145.8
Q ss_pred cCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 010075 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (519)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (519)
++||+|+||||+|+||++++++|++.| .+|++..|+... .+++. ++. ..++.+
T Consensus 25 l~gk~vlVTGas~gIG~aia~~la~~G---~~V~~~~r~~~~---~~~~~-------------~~~--------~~~~~~ 77 (266)
T 3grp_A 25 LTGRKALVTGATGGIGEAIARCFHAQG---AIVGLHGTREDK---LKEIA-------------ADL--------GKDVFV 77 (266)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHHHTT---CEEEEEESCHHH---HHHHH-------------HHH--------CSSEEE
T ss_pred cCCCEEEEeCCCcHHHHHHHHHHHHCC---CEEEEEeCCHHH---HHHHH-------------HHh--------CCceEE
Confidence 678999999999999999999999998 678888876321 11111 111 257899
Q ss_pred EeccCCCCCCCCChhhhHHHHh-------cCccEEEEcCccCCc-------cccHHHHHHHhHHHHHHHHHHHHhc---c
Q 010075 90 VPGDISSEDLGLKDSNLKEELW-------NELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKC---V 152 (519)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~-------~~vdiViH~Aa~v~f-------~~~~~~~~~~Nv~gt~~ll~~a~~~---~ 152 (519)
+.+|++++ +..+.+. .++|++||+||.... .+.++..+++|+.|+..+.+.+... .
T Consensus 78 ~~~Dv~d~-------~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~ 150 (266)
T 3grp_A 78 FSANLSDR-------KSIKQLAEVAEREMEGIDILVNNAGITRDGLFVRMQDQDWDDVLAVNLTAASTLTRELIHSMMRR 150 (266)
T ss_dssp EECCTTSH-------HHHHHHHHHHHHHHTSCCEEEECCCCC-----CCCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHH
T ss_pred EEeecCCH-------HHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 99999953 3233433 379999999997642 2567888999999977776665331 2
Q ss_pred CCceEEEEecceeecCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcHHH
Q 010075 153 KLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYV 232 (519)
Q Consensus 153 ~l~~~V~vSTa~v~~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~Y~ 232 (519)
+..++|++||...+... .....|+
T Consensus 151 ~~g~Iv~isS~~~~~~~--------------------------------------------------------~~~~~Y~ 174 (266)
T 3grp_A 151 RYGRIINITSIVGVVGN--------------------------------------------------------PGQTNYC 174 (266)
T ss_dssp TCEEEEEECCC---------------------------------------------------------------CHHHHH
T ss_pred CCcEEEEECCHHHcCCC--------------------------------------------------------CCchhHH
Confidence 56799999997654211 1235799
Q ss_pred HHHHHHHHHHHHh-----hcCCcEEEEecCccccCCCCCCCcccccccccHHHHHHhhcCCceeeccCCCceeeeeeHHH
Q 010075 233 FTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDM 307 (519)
Q Consensus 233 ~sK~~aE~lv~~~-----~~~lp~~IvRPs~V~g~~~~p~~gw~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~d~vpVDd 307 (519)
.||+..+.+.+.. ..++++..++||.|.++..... ..........+ .....+..++|
T Consensus 175 asKaa~~~~~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~---------~~~~~~~~~~~---------~p~~r~~~~ed 236 (266)
T 3grp_A 175 AAKAGLIGFSKALAQEIASRNITVNCIAPGFIKSAMTDKL---------NEKQKEAIMAM---------IPMKRMGIGEE 236 (266)
T ss_dssp HHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSHHHHTC---------CHHHHHHHHTT---------CTTCSCBCHHH
T ss_pred HHHHHHHHHHHHHHHHhhhhCcEEEEEeeCcCCCchhhcc---------CHHHHHHHHhc---------CCCCCCcCHHH
Confidence 9999888877654 3579999999999977543211 11111222211 12234677899
Q ss_pred HHHHHHHHHHHhccCCCCCcEEEecCCC
Q 010075 308 VVNAMIVAMVAHAKQPSDANIYHVGSSL 335 (519)
Q Consensus 308 va~aii~a~~~~~~~~~~~~iyni~s~~ 335 (519)
+|++++.++..... .-.++++++.+|.
T Consensus 237 vA~~v~~L~s~~~~-~itG~~i~vdGG~ 263 (266)
T 3grp_A 237 IAFATVYLASDEAA-YLTGQTLHINGGM 263 (266)
T ss_dssp HHHHHHHHHSGGGT-TCCSCEEEESTTC
T ss_pred HHHHHHHHhCcccc-CccCCEEEECCCe
Confidence 99999998864332 2247899998873
|
| >3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei} | Back alignment and structure |
|---|
Probab=99.77 E-value=6.9e-18 Score=166.45 Aligned_cols=224 Identities=12% Similarity=0.102 Sum_probs=153.0
Q ss_pred hhhcCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCc
Q 010075 7 VEFLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEK 86 (519)
Q Consensus 7 ~~~~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~ 86 (519)
..-+++|+|+||||+|+||+++++.|++.| .+|+++.|+... .+.+.++ +++. ..+
T Consensus 23 ~~~l~~k~~lVTGas~GIG~aia~~la~~G---~~V~~~~r~~~~---~~~~~~~---------~~~~---------~~~ 78 (270)
T 3ftp_A 23 DKTLDKQVAIVTGASRGIGRAIALELARRG---AMVIGTATTEAG---AEGIGAA---------FKQA---------GLE 78 (270)
T ss_dssp CCTTTTCEEEETTCSSHHHHHHHHHHHHTT---CEEEEEESSHHH---HHHHHHH---------HHHH---------TCC
T ss_pred ccCCCCCEEEEECCCCHHHHHHHHHHHHCC---CEEEEEeCCHHH---HHHHHHH---------HHhc---------CCc
Confidence 344789999999999999999999999998 678898886422 2222211 1111 246
Q ss_pred eEEEeccCCCCCCCCChhhhHHHHh-------cCccEEEEcCccCCc-------cccHHHHHHHhHHHHHHHHHHHHhc-
Q 010075 87 ITFVPGDISSEDLGLKDSNLKEELW-------NELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKC- 151 (519)
Q Consensus 87 v~~v~gDl~~~~lgls~~~~~~~l~-------~~vdiViH~Aa~v~f-------~~~~~~~~~~Nv~gt~~ll~~a~~~- 151 (519)
+..+.+|++++ +..+.++ .++|++||+||.... .+.++..+++|+.|+.++++.+...
T Consensus 79 ~~~~~~Dv~d~-------~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~ 151 (270)
T 3ftp_A 79 GRGAVLNVNDA-------TAVDALVESTLKEFGALNVLVNNAGITQDQLAMRMKDDEWDAVIDTNLKAVFRLSRAVLRPM 151 (270)
T ss_dssp CEEEECCTTCH-------HHHHHHHHHHHHHHSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHH
T ss_pred EEEEEEeCCCH-------HHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHH
Confidence 78899999953 3233333 379999999997542 2567888999999999999887531
Q ss_pred --cCCceEEEEecceeecCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCc
Q 010075 152 --VKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPN 229 (519)
Q Consensus 152 --~~l~~~V~vSTa~v~~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n 229 (519)
.+-.++|++||....... ....
T Consensus 152 ~~~~~g~iv~isS~~~~~~~--------------------------------------------------------~~~~ 175 (270)
T 3ftp_A 152 MKARGGRIVNITSVVGSAGN--------------------------------------------------------PGQV 175 (270)
T ss_dssp HHHTCEEEEEECCHHHHHCC--------------------------------------------------------TTBH
T ss_pred HHcCCCEEEEECchhhCCCC--------------------------------------------------------CCch
Confidence 245689999997654211 2235
Q ss_pred HHHHHHHHHHHHHHHh-----hcCCcEEEEecCccccCCCCCCCcccccccccHHHHHHhhcCCceeeccCCCceeeeee
Q 010075 230 TYVFTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIP 304 (519)
Q Consensus 230 ~Y~~sK~~aE~lv~~~-----~~~lp~~IvRPs~V~g~~~~p~~gw~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~d~vp 304 (519)
.|+.||+..+.+.+.. ..++++..++||.|.++..... .......... ......+..
T Consensus 176 ~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~---------~~~~~~~~~~---------~~p~~r~~~ 237 (270)
T 3ftp_A 176 NYAAAKAGVAGMTRALAREIGSRGITVNCVAPGFIDTDMTKGL---------PQEQQTALKT---------QIPLGRLGS 237 (270)
T ss_dssp HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSHHHHHS---------CHHHHHHHHT---------TCTTCSCBC
T ss_pred hHHHHHHHHHHHHHHHHHHHhhhCeEEEEEEeCCCcCcchhhc---------CHHHHHHHHh---------cCCCCCCCC
Confidence 7999999888877654 3579999999999876533111 1111111111 112345778
Q ss_pred HHHHHHHHHHHHHHhccCCCCCcEEEecCCCC
Q 010075 305 VDMVVNAMIVAMVAHAKQPSDANIYHVGSSLR 336 (519)
Q Consensus 305 VDdva~aii~a~~~~~~~~~~~~iyni~s~~~ 336 (519)
++|+|++++.++..... .-.++++++.+|..
T Consensus 238 pedvA~~v~~L~s~~~~-~itG~~i~vdGG~~ 268 (270)
T 3ftp_A 238 PEDIAHAVAFLASPQAG-YITGTTLHVNGGMF 268 (270)
T ss_dssp HHHHHHHHHHHHSGGGT-TCCSCEEEESTTSS
T ss_pred HHHHHHHHHHHhCCCcC-CccCcEEEECCCcc
Confidence 99999999988853322 22478999988743
|
| >4iin_A 3-ketoacyl-acyl carrier protein reductase (FABG); structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.40A {Helicobacter pylori} PDB: 4ijk_A | Back alignment and structure |
|---|
Probab=99.77 E-value=1.1e-17 Score=165.01 Aligned_cols=221 Identities=15% Similarity=0.131 Sum_probs=150.1
Q ss_pred cCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 010075 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (519)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (519)
++||+|+||||+|+||++++++|++.| .+|+++.|.... ..+.+.+++ ++ ...++.+
T Consensus 27 l~~k~vlITGas~gIG~~la~~l~~~G---~~V~~~~r~~~~--~~~~~~~~~---------~~---------~~~~~~~ 83 (271)
T 4iin_A 27 FTGKNVLITGASKGIGAEIAKTLASMG---LKVWINYRSNAE--VADALKNEL---------EE---------KGYKAAV 83 (271)
T ss_dssp CSCCEEEETTCSSHHHHHHHHHHHHTT---CEEEEEESSCHH--HHHHHHHHH---------HH---------TTCCEEE
T ss_pred cCCCEEEEECCCcHHHHHHHHHHHHCC---CEEEEEeCCCHH--HHHHHHHHH---------Hh---------cCCceEE
Confidence 578999999999999999999999998 678899885422 122222111 11 1257899
Q ss_pred EeccCCCCCCCCChhhhHHHHh-------cCccEEEEcCccCCc-------cccHHHHHHHhHHHHHHHHHHHHhc---c
Q 010075 90 VPGDISSEDLGLKDSNLKEELW-------NELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKC---V 152 (519)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~-------~~vdiViH~Aa~v~f-------~~~~~~~~~~Nv~gt~~ll~~a~~~---~ 152 (519)
+.+|++++ +..+.++ .++|+|||+||.... .+.++..+++|+.|+.++++.+... .
T Consensus 84 ~~~D~~~~-------~~v~~~~~~~~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~ 156 (271)
T 4iin_A 84 IKFDAASE-------SDFIEAIQTIVQSDGGLSYLVNNAGVVRDKLAIKMKTEDFHHVIDNNLTSAFIGCREALKVMSKS 156 (271)
T ss_dssp EECCTTCH-------HHHHHHHHHHHHHHSSCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH
T ss_pred EECCCCCH-------HHHHHHHHHHHHhcCCCCEEEECCCcCCCcccccCCHHHHHHHHHhccHHHHHHHHHHHHHHhhc
Confidence 99999963 2223333 379999999998643 2567888999999999988877442 2
Q ss_pred CCceEEEEecceeecCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcHHH
Q 010075 153 KLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYV 232 (519)
Q Consensus 153 ~l~~~V~vSTa~v~~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~Y~ 232 (519)
+..++|++||....... .....|+
T Consensus 157 ~~g~iv~isS~~~~~~~--------------------------------------------------------~~~~~Y~ 180 (271)
T 4iin_A 157 RFGSVVNVASIIGERGN--------------------------------------------------------MGQTNYS 180 (271)
T ss_dssp TCEEEEEECCHHHHHCC--------------------------------------------------------TTCHHHH
T ss_pred CCCEEEEEechhhcCCC--------------------------------------------------------CCchHhH
Confidence 55799999997654211 2245799
Q ss_pred HHHHHHHHHHHHh-----hcCCcEEEEecCccccCCCCCCCcccccccccHHHHHHhhcCCceeeccCCCceeeeeeHHH
Q 010075 233 FTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDM 307 (519)
Q Consensus 233 ~sK~~aE~lv~~~-----~~~lp~~IvRPs~V~g~~~~p~~gw~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~d~vpVDd 307 (519)
.||+..+.+++.+ ..++.+..++||.|.++.....+.. .... .........+.+++|
T Consensus 181 asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~---------~~~~---------~~~~~~~~~~~~p~d 242 (271)
T 4iin_A 181 ASKGGMIAMSKSFAYEGALRNIRFNSVTPGFIETDMNANLKDE---------LKAD---------YVKNIPLNRLGSAKE 242 (271)
T ss_dssp HHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCCC------------------------------CGGGCTTCSCBCHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhCcEEEEEEeCcccCCchhhhcHH---------HHHH---------HHhcCCcCCCcCHHH
Confidence 9999999988765 3579999999999977654322110 0000 111112345788999
Q ss_pred HHHHHHHHHHHhccCCCCCcEEEecCCC
Q 010075 308 VVNAMIVAMVAHAKQPSDANIYHVGSSL 335 (519)
Q Consensus 308 va~aii~a~~~~~~~~~~~~iyni~s~~ 335 (519)
+|++++.++..... .-.++++++.+|.
T Consensus 243 vA~~i~~l~s~~~~-~itG~~i~vdGG~ 269 (271)
T 4iin_A 243 VAEAVAFLLSDHSS-YITGETLKVNGGL 269 (271)
T ss_dssp HHHHHHHHHSGGGT-TCCSCEEEESTTS
T ss_pred HHHHHHHHhCCCcC-CCcCCEEEeCCCe
Confidence 99999998864332 2247899998873
|
| >3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV} | Back alignment and structure |
|---|
Probab=99.77 E-value=2.3e-17 Score=161.79 Aligned_cols=212 Identities=13% Similarity=0.109 Sum_probs=143.3
Q ss_pred cCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 010075 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (519)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (519)
++||+|+||||+|+||+++++.|++.| .+|+++.|+.... .+.+. ..++.+
T Consensus 25 l~~k~vlVTGas~gIG~aia~~l~~~G---~~V~~~~r~~~~~--~~~~~------------------------~~~~~~ 75 (260)
T 3gem_A 25 LSSAPILITGASQRVGLHCALRLLEHG---HRVIISYRTEHAS--VTELR------------------------QAGAVA 75 (260)
T ss_dssp --CCCEEESSTTSHHHHHHHHHHHHTT---CCEEEEESSCCHH--HHHHH------------------------HHTCEE
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCC---CEEEEEeCChHHH--HHHHH------------------------hcCCeE
Confidence 578999999999999999999999998 5788999986432 22221 023688
Q ss_pred EeccCCCCCCCCChhhhHHHHh-------cCccEEEEcCccCCc------cccHHHHHHHhHHHHHHHHHHHHhc---cC
Q 010075 90 VPGDISSEDLGLKDSNLKEELW-------NELDIMVNSAAITKF------DERYDVAFGINTLGVIHLVNFAKKC---VK 153 (519)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~-------~~vdiViH~Aa~v~f------~~~~~~~~~~Nv~gt~~ll~~a~~~---~~ 153 (519)
+.+|++++ +..+.++ .++|++||+||.... .+.++..+++|+.|+.++++.+... .+
T Consensus 76 ~~~Dv~~~-------~~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~ 148 (260)
T 3gem_A 76 LYGDFSCE-------TGIMAFIDLLKTQTSSLRAVVHNASEWLAETPGEEADNFTRMFSVHMLAPYLINLHCEPLLTASE 148 (260)
T ss_dssp EECCTTSH-------HHHHHHHHHHHHHCSCCSEEEECCCCCCCCCTTCHHHHHHHHHHHHTHHHHHHHHHHHHHHHTSS
T ss_pred EECCCCCH-------HHHHHHHHHHHHhcCCCCEEEECCCccCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 99999953 2223333 379999999997532 2456778999999999999887542 24
Q ss_pred CceEEEEecceeecCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcHHHH
Q 010075 154 LKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVF 233 (519)
Q Consensus 154 l~~~V~vSTa~v~~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~Y~~ 233 (519)
..++|++||...+... .....|+.
T Consensus 149 ~g~iv~isS~~~~~~~--------------------------------------------------------~~~~~Y~a 172 (260)
T 3gem_A 149 VADIVHISDDVTRKGS--------------------------------------------------------SKHIAYCA 172 (260)
T ss_dssp SCEEEEECCGGGGTCC--------------------------------------------------------SSCHHHHH
T ss_pred CcEEEEECChhhcCCC--------------------------------------------------------CCcHhHHH
Confidence 5789999997654321 22357999
Q ss_pred HHHHHHHHHHHh----hcCCcEEEEecCccccCCCCCCCcccccccccHHHHHHhhcCCceeeccCCCceeeeeeHHHHH
Q 010075 234 TKTMGEMLMQQS----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVV 309 (519)
Q Consensus 234 sK~~aE~lv~~~----~~~lp~~IvRPs~V~g~~~~p~~gw~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~d~vpVDdva 309 (519)
||+..+.+.+.+ .+++.+..++||.|.++...+ +.+. ...... ....-+..++|+|
T Consensus 173 sKaa~~~l~~~la~e~~~~Irvn~v~PG~v~t~~~~~-~~~~----------~~~~~~---------~p~~r~~~~edva 232 (260)
T 3gem_A 173 TKAGLESLTLSFAARFAPLVKVNGIAPALLMFQPKDD-AAYR----------ANALAK---------SALGIEPGAEVIY 232 (260)
T ss_dssp HHHHHHHHHHHHHHHHTTTCEEEEEEECTTCC-----------------------------------CCSCCCCCTHHHH
T ss_pred HHHHHHHHHHHHHHHHCCCCEEEEEeecccccCCCCC-HHHH----------HHHHhc---------CCCCCCCCHHHHH
Confidence 999999888754 446999999999997653211 1111 111111 1112245689999
Q ss_pred HHHHHHHHHhccCCCCCcEEEecCCCC
Q 010075 310 NAMIVAMVAHAKQPSDANIYHVGSSLR 336 (519)
Q Consensus 310 ~aii~a~~~~~~~~~~~~iyni~s~~~ 336 (519)
++++.++.. ..-.++++++.+|..
T Consensus 233 ~~v~~L~~~---~~itG~~i~vdGG~~ 256 (260)
T 3gem_A 233 QSLRYLLDS---TYVTGTTLTVNGGRH 256 (260)
T ss_dssp HHHHHHHHC---SSCCSCEEEESTTTT
T ss_pred HHHHHHhhC---CCCCCCEEEECCCcc
Confidence 999998842 222478999998854
|
| >1sny_A Sniffer CG10964-PA; alpha and beta protein, rossmann fold, dinucleotide binding oxidoreductase; HET: NAP; 1.75A {Drosophila melanogaster} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.77 E-value=4.1e-17 Score=159.95 Aligned_cols=211 Identities=12% Similarity=0.143 Sum_probs=146.7
Q ss_pred hhhcCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCc
Q 010075 7 VEFLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEK 86 (519)
Q Consensus 7 ~~~~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~ 86 (519)
...+++|+|+||||||+||++++++|++.|....+|+++.|+.......+.+. +. ..+
T Consensus 16 ~~~~~~k~vlITGasggIG~~la~~L~~~G~~~~~V~~~~r~~~~~~~~~~l~-------------~~---------~~~ 73 (267)
T 1sny_A 16 PRGSHMNSILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKELEDLA-------------KN---------HSN 73 (267)
T ss_dssp ----CCSEEEESCCSSHHHHHHHHHHHTSSSCCSEEEEEESCTTSCHHHHHHH-------------HH---------CTT
T ss_pred ccCCCCCEEEEECCCCcHHHHHHHHHHhcCCCCcEEEEEecChhhhHHHHHhh-------------cc---------CCc
Confidence 34578899999999999999999999998744357899999875543222221 11 257
Q ss_pred eEEEeccCCCCCCCCChhhhHHHHhc---------CccEEEEcCccCC----c----cccHHHHHHHhHHHHHHHHHHHH
Q 010075 87 ITFVPGDISSEDLGLKDSNLKEELWN---------ELDIMVNSAAITK----F----DERYDVAFGINTLGVIHLVNFAK 149 (519)
Q Consensus 87 v~~v~gDl~~~~lgls~~~~~~~l~~---------~vdiViH~Aa~v~----f----~~~~~~~~~~Nv~gt~~ll~~a~ 149 (519)
+.++.+|++++ +..+.+++ ++|+|||+||... + .+.++..+++|+.|+.++++.+.
T Consensus 74 ~~~~~~Dl~~~-------~~v~~~~~~~~~~~g~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~ 146 (267)
T 1sny_A 74 IHILEIDLRNF-------DAYDKLVADIEGVTKDQGLNVLFNNAGIAPKSARITAVRSQELLDTLQTNTVVPIMLAKACL 146 (267)
T ss_dssp EEEEECCTTCG-------GGHHHHHHHHHHHHGGGCCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHH
T ss_pred eEEEEecCCCh-------HHHHHHHHHHHHhcCCCCccEEEECCCcCCCccccccCCHHHHHHHHhhhchHHHHHHHHHH
Confidence 89999999963 22234333 7999999999764 1 25677889999999999999886
Q ss_pred hcc---------C-----CceEEEEecceeecCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHh
Q 010075 150 KCV---------K-----LKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMK 215 (519)
Q Consensus 150 ~~~---------~-----l~~~V~vSTa~v~~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 215 (519)
+.- + ..+||++||...+.... +
T Consensus 147 ~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~------------~-------------------------------- 182 (267)
T 1sny_A 147 PLLKKAAKANESQPMGVGRAAIINMSSILGSIQGN------------T-------------------------------- 182 (267)
T ss_dssp HHHHHHHHHTTTSCSSTTTCEEEEECCGGGCSTTC------------C--------------------------------
T ss_pred HHHhhcccccccccccCCCceEEEEecccccccCC------------C--------------------------------
Confidence 530 1 46899999987654211 0
Q ss_pred hccccccccCCCCcHHHHHHHHHHHHHHHh-----hcCCcEEEEecCccccCCCCCCCcccccccccHHHHHHhhcCCce
Q 010075 216 NLGTERAKLHGWPNTYVFTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLR 290 (519)
Q Consensus 216 ~lg~~~~~~~~~~n~Y~~sK~~aE~lv~~~-----~~~lp~~IvRPs~V~g~~~~p~~gw~~~~~~~~~~i~~~~~g~~~ 290 (519)
..+...|+.||+..|.+++.+ ..+++++++|||.|..+...+
T Consensus 183 ---------~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~------------------------ 229 (267)
T 1sny_A 183 ---------DGGMYAYRTSKSALNAATKSLSVDLYPQRIMCVSLHPGWVKTDMGGS------------------------ 229 (267)
T ss_dssp ---------SCCCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEECCCSBCSTTTCT------------------------
T ss_pred ---------CCCchHHHHHHHHHHHHHHHHHHHhhcCCcEEEEeCCcceecCCCCC------------------------
Confidence 013457999999999998765 258999999999986643210
Q ss_pred eeccCCCceeeeeeHHHHHHHHHHHHHHhccCCCCCcEEEecC
Q 010075 291 CLVGETKVIMDVIPVDMVVNAMIVAMVAHAKQPSDANIYHVGS 333 (519)
Q Consensus 291 ~~~~~~~~~~d~vpVDdva~aii~a~~~~~~~~~~~~iyni~s 333 (519)
...+..+++|+.++.++...... ..+..+++.+
T Consensus 230 ---------~~~~~~~~~a~~~~~~~~~~~~~-~~G~~~~~~g 262 (267)
T 1sny_A 230 ---------SAPLDVPTSTGQIVQTISKLGEK-QNGGFVNYDG 262 (267)
T ss_dssp ---------TCSBCHHHHHHHHHHHHHHCCGG-GTTCEECTTS
T ss_pred ---------CCCCCHHHHHHHHHHHHHhcCcC-CCCcEEccCC
Confidence 01367899999999998753221 1255666543
|
| >2ag5_A DHRS6, dehydrogenase/reductase (SDR family) member 6; protein-CO-factor complex, structural genomics, structural G consortium, SGC, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.77 E-value=4.6e-18 Score=165.10 Aligned_cols=221 Identities=11% Similarity=0.085 Sum_probs=149.5
Q ss_pred cCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 010075 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (519)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (519)
++||+|+||||||+||+++++.|++.| .+|+++.|+.. ++. ++ . + ..++.+
T Consensus 4 l~~k~vlVTGas~gIG~~ia~~l~~~G---~~V~~~~r~~~------~~~-~~---------~-~---------~~~~~~ 54 (246)
T 2ag5_A 4 LDGKVIILTAAAQGIGQAAALAFAREG---AKVIATDINES------KLQ-EL---------E-K---------YPGIQT 54 (246)
T ss_dssp TTTCEEEESSTTSHHHHHHHHHHHHTT---CEEEEEESCHH------HHG-GG---------G-G---------STTEEE
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCC---CEEEEEECCHH------HHH-HH---------H-h---------ccCceE
Confidence 578999999999999999999999998 67889888631 111 00 0 0 136889
Q ss_pred EeccCCCCCCCCChhhhHHHH---hcCccEEEEcCccCCc-------cccHHHHHHHhHHHHHHHHHHHHhc---cCCce
Q 010075 90 VPGDISSEDLGLKDSNLKEEL---WNELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKC---VKLKV 156 (519)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l---~~~vdiViH~Aa~v~f-------~~~~~~~~~~Nv~gt~~ll~~a~~~---~~l~~ 156 (519)
+.+|++++ +..+.+ ..++|+|||+||.... .+.++..+++|+.|+.++++.+... .+..+
T Consensus 55 ~~~D~~~~-------~~~~~~~~~~~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~g~ 127 (246)
T 2ag5_A 55 RVLDVTKK-------KQIDQFANEVERLDVLFNVAGFVHHGTVLDCEEKDWDFSMNLNVRSMYLMIKAFLPKMLAQKSGN 127 (246)
T ss_dssp EECCTTCH-------HHHHHHHHHCSCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEE
T ss_pred EEeeCCCH-------HHHHHHHHHhCCCCEEEECCccCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCce
Confidence 99999963 222233 3579999999997643 2467788999999999999887531 25679
Q ss_pred EEEEecceeecCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcHHHHHHH
Q 010075 157 FVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKT 236 (519)
Q Consensus 157 ~V~vSTa~v~~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~Y~~sK~ 236 (519)
+|++||...+.... .....|+.||+
T Consensus 128 iv~isS~~~~~~~~-------------------------------------------------------~~~~~Y~~sK~ 152 (246)
T 2ag5_A 128 IINMSSVASSVKGV-------------------------------------------------------VNRCVYSTTKA 152 (246)
T ss_dssp EEEECCSBTTTBCC-------------------------------------------------------TTBHHHHHHHH
T ss_pred EEEEechHhCcCCC-------------------------------------------------------CCCccHHHHHH
Confidence 99999976542110 12357999999
Q ss_pred HHHHHHHHh-----hcCCcEEEEecCccccCCCCCCCcccccccccHHHHHHhhcCCceeeccCCCceeeeeeHHHHHHH
Q 010075 237 MGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNA 311 (519)
Q Consensus 237 ~aE~lv~~~-----~~~lp~~IvRPs~V~g~~~~p~~gw~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~d~vpVDdva~a 311 (519)
..|.+.+.. ..+++++++|||.|.++.... +.................. ....++..+|+|++
T Consensus 153 a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~---~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~dvA~~ 220 (246)
T 2ag5_A 153 AVIGLTKSVAADFIQQGIRCNCVCPGTVDTPSLQE---RIQARGNPEEARNDFLKRQ---------KTGRFATAEEIAML 220 (246)
T ss_dssp HHHHHHHHHHHHHGGGTEEEEEEEESCEECHHHHH---HHHHSSSHHHHHHHHHHTC---------TTSSCEEHHHHHHH
T ss_pred HHHHHHHHHHHHhhhcCcEEEEEeeCcCcCcchhh---hhhcccCcHHHHHHHHhcC---------CCCCCCCHHHHHHH
Confidence 999988765 348999999999998864211 0000000111111111110 11246899999999
Q ss_pred HHHHHHHhccCCCCCcEEEecCC
Q 010075 312 MIVAMVAHAKQPSDANIYHVGSS 334 (519)
Q Consensus 312 ii~a~~~~~~~~~~~~iyni~s~ 334 (519)
++.++..... .-.++++++.+|
T Consensus 221 v~~l~s~~~~-~~tG~~i~vdgG 242 (246)
T 2ag5_A 221 CVYLASDESA-YVTGNPVIIDGG 242 (246)
T ss_dssp HHHHHSGGGT-TCCSCEEEECTT
T ss_pred HHHHhCcccc-CCCCCEEEECCC
Confidence 9998864322 223688999877
|
| >1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.77 E-value=2e-17 Score=163.24 Aligned_cols=225 Identities=16% Similarity=0.140 Sum_probs=148.5
Q ss_pred cCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 010075 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (519)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (519)
++||+++||||||+||++++++|++.| .+|+++.|+... .+.+.+ .+++. ..++.+
T Consensus 19 l~~k~vlVTGas~gIG~aia~~l~~~G---~~V~~~~r~~~~---~~~~~~---------~~~~~---------~~~~~~ 74 (273)
T 1ae1_A 19 LKGTTALVTGGSKGIGYAIVEELAGLG---ARVYTCSRNEKE---LDECLE---------IWREK---------GLNVEG 74 (273)
T ss_dssp CTTCEEEEESCSSHHHHHHHHHHHHTT---CEEEEEESCHHH---HHHHHH---------HHHHT---------TCCEEE
T ss_pred CCCCEEEEECCcchHHHHHHHHHHHCC---CEEEEEeCCHHH---HHHHHH---------HHHhc---------CCceEE
Confidence 678999999999999999999999998 678999886421 111111 11111 246889
Q ss_pred EeccCCCCCCCCChhhhHHHHh--------cCccEEEEcCccCCc-------cccHHHHHHHhHHHHHHHHHHHHhc---
Q 010075 90 VPGDISSEDLGLKDSNLKEELW--------NELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKC--- 151 (519)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~--------~~vdiViH~Aa~v~f-------~~~~~~~~~~Nv~gt~~ll~~a~~~--- 151 (519)
+.+|++++ +..+.++ .++|++||+||.... .+.++..+++|+.|+.++++.+...
T Consensus 75 ~~~D~~~~-------~~~~~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~ 147 (273)
T 1ae1_A 75 SVCDLLSR-------TERDKLMQTVAHVFDGKLNILVNNAGVVIHKEAKDFTEKDYNIIMGTNFEAAYHLSQIAYPLLKA 147 (273)
T ss_dssp EECCTTCH-------HHHHHHHHHHHHHTTSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHH
T ss_pred EECCCCCH-------HHHHHHHHHHHHHcCCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHh
Confidence 99999963 2223333 579999999997532 2467888999999999999887431
Q ss_pred cCCceEEEEecceeecCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcHH
Q 010075 152 VKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTY 231 (519)
Q Consensus 152 ~~l~~~V~vSTa~v~~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~Y 231 (519)
.+..++|++||...+... .....|
T Consensus 148 ~~~g~iv~isS~~~~~~~--------------------------------------------------------~~~~~Y 171 (273)
T 1ae1_A 148 SQNGNVIFLSSIAGFSAL--------------------------------------------------------PSVSLY 171 (273)
T ss_dssp HTSEEEEEECCGGGTSCC--------------------------------------------------------TTCHHH
T ss_pred cCCcEEEEEcCHhhcCCC--------------------------------------------------------CCcchh
Confidence 256799999998765421 123579
Q ss_pred HHHHHHHHHHHHHh-----hcCCcEEEEecCccccCCCCCCCcccccccccHHHHHHhhcCCceeeccCCCceeeeeeHH
Q 010075 232 VFTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVD 306 (519)
Q Consensus 232 ~~sK~~aE~lv~~~-----~~~lp~~IvRPs~V~g~~~~p~~gw~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~d~vpVD 306 (519)
+.||+..+.+.+.. ..++++.+++||.|.++...... ................ . ....+..++
T Consensus 172 ~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~---~~~~~~~~~~~~~~~~----~-----p~~r~~~p~ 239 (273)
T 1ae1_A 172 SASKGAINQMTKSLACEWAKDNIRVNSVAPGVILTPLVETAI---KKNPHQKEEIDNFIVK----T-----PMGRAGKPQ 239 (273)
T ss_dssp HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBC----------------CHHHHHHHHHH----S-----TTCSCBCHH
T ss_pred HHHHHHHHHHHHHHHHHHhhcCcEEEEEEeCCCcCchhhhhh---hcccCcHHHHHHHHhc----C-----CCCCCcCHH
Confidence 99999999888765 34899999999999887542110 0000001111111110 0 112367899
Q ss_pred HHHHHHHHHHHHhccCCCCCcEEEecCC
Q 010075 307 MVVNAMIVAMVAHAKQPSDANIYHVGSS 334 (519)
Q Consensus 307 dva~aii~a~~~~~~~~~~~~iyni~s~ 334 (519)
|+|++++.++.... ..-.++++++.+|
T Consensus 240 dvA~~v~~l~s~~~-~~~tG~~i~vdGG 266 (273)
T 1ae1_A 240 EVSALIAFLCFPAA-SYITGQIIWADGG 266 (273)
T ss_dssp HHHHHHHHHHSGGG-TTCCSCEEEESTT
T ss_pred HHHHHHHHHhCccc-cCcCCCEEEECCC
Confidence 99999998885332 2223689999887
|
| >3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
Probab=99.77 E-value=5.8e-18 Score=167.59 Aligned_cols=226 Identities=14% Similarity=0.091 Sum_probs=150.8
Q ss_pred hcCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceE
Q 010075 9 FLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKIT 88 (519)
Q Consensus 9 ~~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~ 88 (519)
-++||+|+||||+|+||++++++|++.| .+|+++.|+... .+.+. ++. ..++.
T Consensus 26 ~l~gk~vlVTGas~gIG~aia~~la~~G---~~V~~~~r~~~~---~~~~~-------------~~~--------~~~~~ 78 (277)
T 3gvc_A 26 DLAGKVAIVTGAGAGIGLAVARRLADEG---CHVLCADIDGDA---ADAAA-------------TKI--------GCGAA 78 (277)
T ss_dssp -CTTCEEEETTTTSTHHHHHHHHHHHTT---CEEEEEESSHHH---HHHHH-------------HHH--------CSSCE
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCC---CEEEEEeCCHHH---HHHHH-------------HHc--------CCcce
Confidence 3689999999999999999999999998 688888886421 11111 111 25788
Q ss_pred EEeccCCCCCCCCChhhhHHHHh-------cCccEEEEcCccCCc-------cccHHHHHHHhHHHHHHHHHHHHhc---
Q 010075 89 FVPGDISSEDLGLKDSNLKEELW-------NELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKC--- 151 (519)
Q Consensus 89 ~v~gDl~~~~lgls~~~~~~~l~-------~~vdiViH~Aa~v~f-------~~~~~~~~~~Nv~gt~~ll~~a~~~--- 151 (519)
++.+|++++ +..+.++ .++|++||+||.... .+.++..+++|+.|+..+++.+...
T Consensus 79 ~~~~Dv~d~-------~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~ 151 (277)
T 3gvc_A 79 ACRVDVSDE-------QQIIAMVDACVAAFGGVDKLVANAGVVHLASLIDTTVEDFDRVIAINLRGAWLCTKHAAPRMIE 151 (277)
T ss_dssp EEECCTTCH-------HHHHHHHHHHHHHHSSCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEecCCCH-------HHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHh
Confidence 999999963 2222333 379999999998643 2567888999999999998887542
Q ss_pred cCCceEEEEecceeecCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcHH
Q 010075 152 VKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTY 231 (519)
Q Consensus 152 ~~l~~~V~vSTa~v~~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~Y 231 (519)
.+..++|++||....... .....|
T Consensus 152 ~~~g~Iv~isS~~~~~~~--------------------------------------------------------~~~~~Y 175 (277)
T 3gvc_A 152 RGGGAIVNLSSLAGQVAV--------------------------------------------------------GGTGAY 175 (277)
T ss_dssp TTCEEEEEECCGGGTSCC--------------------------------------------------------TTBHHH
T ss_pred cCCcEEEEEcchhhccCC--------------------------------------------------------CCchhH
Confidence 345789999997543211 224579
Q ss_pred HHHHHHHHHHHHHh-----hcCCcEEEEecCccccCCCCCCCcccccccccHHHHHHhhcCCceeeccCCCceeeeeeHH
Q 010075 232 VFTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVD 306 (519)
Q Consensus 232 ~~sK~~aE~lv~~~-----~~~lp~~IvRPs~V~g~~~~p~~gw~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~d~vpVD 306 (519)
+.||+..+.+.+.. ..++++.+++||.|.++........... ... ........ ......+..++
T Consensus 176 ~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~~~~~~-----~~~----~~~~~~~~--~~~~~r~~~pe 244 (277)
T 3gvc_A 176 GMSKAGIIQLSRITAAELRSSGIRSNTLLPAFVDTPMQQTAMAMFDG-----ALG----AGGARSMI--ARLQGRMAAPE 244 (277)
T ss_dssp HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHHTCC---------------CCHHHHH--HHHHSSCBCHH
T ss_pred HHHHHHHHHHHHHHHHHhcccCeEEEEEeeCCccCchHHHhhhcchh-----hHH----HHhhhhhh--hccccCCCCHH
Confidence 99999999888754 3579999999999987642110000000 000 00000000 00113467899
Q ss_pred HHHHHHHHHHHHhccCCCCCcEEEecCCCC
Q 010075 307 MVVNAMIVAMVAHAKQPSDANIYHVGSSLR 336 (519)
Q Consensus 307 dva~aii~a~~~~~~~~~~~~iyni~s~~~ 336 (519)
|+|++++.++..... .-.++++++.+|..
T Consensus 245 dvA~~v~~L~s~~a~-~itG~~i~vdGG~~ 273 (277)
T 3gvc_A 245 EMAGIVVFLLSDDAS-MITGTTQIADGGTI 273 (277)
T ss_dssp HHHHHHHHHHSGGGT-TCCSCEEEESTTGG
T ss_pred HHHHHHHHHcCCccC-CccCcEEEECCcch
Confidence 999999998864332 22478999988743
|
| >3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.77 E-value=6.1e-18 Score=166.14 Aligned_cols=233 Identities=15% Similarity=0.178 Sum_probs=154.3
Q ss_pred hhhhcCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCC
Q 010075 6 VVEFLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISE 85 (519)
Q Consensus 6 i~~~~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~ 85 (519)
+...++||+++||||+|+||+++++.|++.| .+|+++.|+... .+.+.++ +++. ..
T Consensus 5 m~~~l~~k~vlVTGas~gIG~aia~~l~~~G---~~V~~~~r~~~~---~~~~~~~---------~~~~---------~~ 60 (264)
T 3ucx_A 5 MGGLLTDKVVVISGVGPALGTTLARRCAEQG---ADLVLAARTVER---LEDVAKQ---------VTDT---------GR 60 (264)
T ss_dssp --CTTTTCEEEEESCCTTHHHHHHHHHHHTT---CEEEEEESCHHH---HHHHHHH---------HHHT---------TC
T ss_pred cCCCcCCcEEEEECCCcHHHHHHHHHHHHCc---CEEEEEeCCHHH---HHHHHHH---------HHhc---------CC
Confidence 4456889999999999999999999999998 678898886422 2222211 1111 25
Q ss_pred ceEEEeccCCCCCCCCChhhhHHHHh-------cCccEEEEcCccCCc--------cccHHHHHHHhHHHHHHHHHHHHh
Q 010075 86 KITFVPGDISSEDLGLKDSNLKEELW-------NELDIMVNSAAITKF--------DERYDVAFGINTLGVIHLVNFAKK 150 (519)
Q Consensus 86 ~v~~v~gDl~~~~lgls~~~~~~~l~-------~~vdiViH~Aa~v~f--------~~~~~~~~~~Nv~gt~~ll~~a~~ 150 (519)
++.++.+|++++ +..+.++ .++|++||+||.... .+.++..+++|+.|+.++++.+..
T Consensus 61 ~~~~~~~Dv~~~-------~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~ 133 (264)
T 3ucx_A 61 RALSVGTDITDD-------AQVAHLVDETMKAYGRVDVVINNAFRVPSMKPFANTTFEHMRDAIELTVFGALRLIQGFTP 133 (264)
T ss_dssp CEEEEECCTTCH-------HHHHHHHHHHHHHTSCCSEEEECCCSCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHTHH
T ss_pred cEEEEEcCCCCH-------HHHHHHHHHHHHHcCCCcEEEECCCCCCCCCCchhCCHHHHHHHHHHHhHHHHHHHHHHHH
Confidence 789999999963 3223333 379999999987421 256788899999999999988754
Q ss_pred c--cCCceEEEEecceeecCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCC
Q 010075 151 C--VKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWP 228 (519)
Q Consensus 151 ~--~~l~~~V~vSTa~v~~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~ 228 (519)
. ++-.++|++||....... ...
T Consensus 134 ~~~~~~g~iv~isS~~~~~~~--------------------------------------------------------~~~ 157 (264)
T 3ucx_A 134 ALEESKGAVVNVNSMVVRHSQ--------------------------------------------------------AKY 157 (264)
T ss_dssp HHHHHTCEEEEECCGGGGCCC--------------------------------------------------------TTC
T ss_pred HHHHcCCEEEEECcchhccCC--------------------------------------------------------Ccc
Confidence 2 112689999997654211 123
Q ss_pred cHHHHHHHHHHHHHHHh-----hcCCcEEEEecCccccCCCCCCCcc-cccc-cccHHHHHHhhcCCceeeccCCCceee
Q 010075 229 NTYVFTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGW-VEDL-KTINTLFVASAQGNLRCLVGETKVIMD 301 (519)
Q Consensus 229 n~Y~~sK~~aE~lv~~~-----~~~lp~~IvRPs~V~g~~~~p~~gw-~~~~-~~~~~~i~~~~~g~~~~~~~~~~~~~d 301 (519)
..|+.||+..+.+.+.. ..++++..++||.|.++........ .... ........... .......
T Consensus 158 ~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~p~~r 228 (264)
T 3ucx_A 158 GAYKMAKSALLAMSQTLATELGEKGIRVNSVLPGYIWGGTLKSYFEHQAGKYGTSVEDIYNAAA---------AGSDLKR 228 (264)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEESSCBSHHHHHHHHHHHHHTTCCHHHHHHHHH---------TTSSSSS
T ss_pred HHHHHHHHHHHHHHHHHHHHhCccCeEEEEEecCccccccHHHHHHhhhhhcCCCHHHHHHHHh---------ccCCccc
Confidence 57999999999888765 3579999999999987643110000 0000 00011111111 2223345
Q ss_pred eeeHHHHHHHHHHHHHHhccCCCCCcEEEecCCC
Q 010075 302 VIPVDMVVNAMIVAMVAHAKQPSDANIYHVGSSL 335 (519)
Q Consensus 302 ~vpVDdva~aii~a~~~~~~~~~~~~iyni~s~~ 335 (519)
+..++|+|++++.++..... .-.++++++.+|.
T Consensus 229 ~~~p~dvA~~v~~L~s~~~~-~itG~~i~vdGG~ 261 (264)
T 3ucx_A 229 LPTEDEVASAILFMASDLAS-GITGQALDVNCGE 261 (264)
T ss_dssp CCBHHHHHHHHHHHHSGGGT-TCCSCEEEESTTS
T ss_pred CCCHHHHHHHHHHHcCcccc-CCCCCEEEECCCc
Confidence 78999999999998864332 2247899998874
|
| >1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann fold, short-chain dehydrogenase, oxidoreductase; 1.22A {Comamonas testosteroni} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.77 E-value=1.3e-17 Score=162.72 Aligned_cols=221 Identities=16% Similarity=0.132 Sum_probs=147.6
Q ss_pred hcCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceE
Q 010075 9 FLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKIT 88 (519)
Q Consensus 9 ~~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~ 88 (519)
-++||+|+||||||+||++++++|++.| .+|+++.|+.. ..+++.+ +. ..++.
T Consensus 3 ~l~~k~vlVTGas~giG~~ia~~l~~~G---~~V~~~~r~~~---~~~~~~~-------------~~--------~~~~~ 55 (253)
T 1hxh_A 3 RLQGKVALVTGGASGVGLEVVKLLLGEG---AKVAFSDINEA---AGQQLAA-------------EL--------GERSM 55 (253)
T ss_dssp TTTTCEEEETTTTSHHHHHHHHHHHHTT---CEEEEECSCHH---HHHHHHH-------------HH--------CTTEE
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCC---CEEEEEeCCHH---HHHHHHH-------------Hc--------CCceE
Confidence 3678999999999999999999999998 67888888632 1122211 11 25688
Q ss_pred EEeccCCCCCCCCChhhhHHHHh-------cCccEEEEcCccCCc-------cccHHHHHHHhHHHHHHHHHHHHh-c--
Q 010075 89 FVPGDISSEDLGLKDSNLKEELW-------NELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKK-C-- 151 (519)
Q Consensus 89 ~v~gDl~~~~lgls~~~~~~~l~-------~~vdiViH~Aa~v~f-------~~~~~~~~~~Nv~gt~~ll~~a~~-~-- 151 (519)
++.+|++++ +..+.++ .++|+|||+||.... .+.++..+++|+.|+..+.+.+.+ +
T Consensus 56 ~~~~D~~~~-------~~v~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~ 128 (253)
T 1hxh_A 56 FVRHDVSSE-------ADWTLVMAAVQRRLGTLNVLVNNAGILLPGDMETGRLEDFSRLLKINTESVFIGCQQGIAAMKE 128 (253)
T ss_dssp EECCCTTCH-------HHHHHHHHHHHHHHCSCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTT
T ss_pred EEEccCCCH-------HHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHhhcHHHHHHHHHHHHHHHH
Confidence 999999963 2222332 368999999997542 256788899999988877665432 1
Q ss_pred cCCceEEEEecceeecCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcHH
Q 010075 152 VKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTY 231 (519)
Q Consensus 152 ~~l~~~V~vSTa~v~~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~Y 231 (519)
.+ .++|++||...+... .....|
T Consensus 129 ~~-g~iv~isS~~~~~~~--------------------------------------------------------~~~~~Y 151 (253)
T 1hxh_A 129 TG-GSIINMASVSSWLPI--------------------------------------------------------EQYAGY 151 (253)
T ss_dssp TC-EEEEEECCGGGTSCC--------------------------------------------------------TTBHHH
T ss_pred cC-CEEEEEcchhhcCCC--------------------------------------------------------CCCccH
Confidence 24 899999998654321 123579
Q ss_pred HHHHHHHHHHHHHh-----hc--CCcEEEEecCccccCCCCC-CCcccccccccHHHHHHhhcCCceeeccCCCceeeee
Q 010075 232 VFTKTMGEMLMQQS-----KE--NLSLVIIRPTVVSGTYKEP-FPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVI 303 (519)
Q Consensus 232 ~~sK~~aE~lv~~~-----~~--~lp~~IvRPs~V~g~~~~p-~~gw~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~d~v 303 (519)
+.||+..|.+.+.. .. +++++++|||.|.++.... .+ .. ..... ..... .......+.
T Consensus 152 ~~sK~a~~~~~~~la~e~~~~~~gi~v~~v~Pg~v~t~~~~~~~~---~~--~~~~~---~~~~~------~~~p~~~~~ 217 (253)
T 1hxh_A 152 SASKAAVSALTRAAALSCRKQGYAIRVNSIHPDGIYTPMMQASLP---KG--VSKEM---VLHDP------KLNRAGRAY 217 (253)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEESEECCHHHHHHSC---TT--CCHHH---HBCBT------TTBTTCCEE
T ss_pred HHHHHHHHHHHHHHHHHhhhcCCCeEEEEEEeCCccCchhhhccc---hh--hhHHH---Hhhhh------ccCccCCCC
Confidence 99999999988765 23 8999999999998864311 00 00 00000 00000 011123478
Q ss_pred eHHHHHHHHHHHHHHhccCCCCCcEEEecCCC
Q 010075 304 PVDMVVNAMIVAMVAHAKQPSDANIYHVGSSL 335 (519)
Q Consensus 304 pVDdva~aii~a~~~~~~~~~~~~iyni~s~~ 335 (519)
.++|+|++++.++..... .-.++++++.+|.
T Consensus 218 ~~~dvA~~~~~l~s~~~~-~~tG~~~~vdgG~ 248 (253)
T 1hxh_A 218 MPERIAQLVLFLASDESS-VMSGSELHADNSI 248 (253)
T ss_dssp CHHHHHHHHHHHHSGGGT-TCCSCEEEESSSC
T ss_pred CHHHHHHHHHHHcCcccc-CCCCcEEEECCCc
Confidence 999999999998864322 2236899998874
|
| >3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1} | Back alignment and structure |
|---|
Probab=99.77 E-value=6.3e-18 Score=165.93 Aligned_cols=226 Identities=15% Similarity=0.174 Sum_probs=148.9
Q ss_pred cCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 010075 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (519)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (519)
++||+++||||+|+||+++++.|++.| .+|+++.|........+++.+++ ++ ...++.+
T Consensus 9 l~~k~vlVTGas~GIG~aia~~la~~G---~~V~~~~r~~~~~~~~~~~~~~~---------~~---------~~~~~~~ 67 (262)
T 3ksu_A 9 LKNKVIVIAGGIKNLGALTAKTFALES---VNLVLHYHQAKDSDTANKLKDEL---------ED---------QGAKVAL 67 (262)
T ss_dssp CTTCEEEEETCSSHHHHHHHHHHTTSS---CEEEEEESCGGGHHHHHHHHHHH---------HT---------TTCEEEE
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCC---CEEEEEecCccCHHHHHHHHHHH---------Hh---------cCCcEEE
Confidence 679999999999999999999999998 67888888655444444433222 11 1257899
Q ss_pred EeccCCCCCCCCChhhhHHHHh-------cCccEEEEcCccCCc-------cccHHHHHHHhHHHHHHHHHHHHhc-cCC
Q 010075 90 VPGDISSEDLGLKDSNLKEELW-------NELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKC-VKL 154 (519)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~-------~~vdiViH~Aa~v~f-------~~~~~~~~~~Nv~gt~~ll~~a~~~-~~l 154 (519)
+.+|+++ .+..+.++ .++|++||+||.... .+.++..+++|+.|+..+++.+... ++-
T Consensus 68 ~~~Dv~d-------~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~ 140 (262)
T 3ksu_A 68 YQSDLSN-------EEEVAKLFDFAEKEFGKVDIAINTVGKVLKKPIVETSEAEFDAMDTINNKVAYFFIKQAAKHMNPN 140 (262)
T ss_dssp EECCCCS-------HHHHHHHHHHHHHHHCSEEEEEECCCCCCSSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHTTEEEE
T ss_pred EECCCCC-------HHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCC
Confidence 9999995 33333443 379999999997532 2567788999999999999998763 344
Q ss_pred ceEEEEecceeecCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcHHHHH
Q 010075 155 KVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFT 234 (519)
Q Consensus 155 ~~~V~vSTa~v~~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~Y~~s 234 (519)
.++|++||....... .....|+.|
T Consensus 141 g~iv~isS~~~~~~~--------------------------------------------------------~~~~~Y~as 164 (262)
T 3ksu_A 141 GHIITIATSLLAAYT--------------------------------------------------------GFYSTYAGN 164 (262)
T ss_dssp EEEEEECCCHHHHHH--------------------------------------------------------CCCCC----
T ss_pred CEEEEEechhhccCC--------------------------------------------------------CCCchhHHH
Confidence 689999997654321 123469999
Q ss_pred HHHHHHHHHHh-----hcCCcEEEEecCccccCCCCCCCcccccccccHHHHHHhhcCCceeeccCCCceeeeeeHHHHH
Q 010075 235 KTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVV 309 (519)
Q Consensus 235 K~~aE~lv~~~-----~~~lp~~IvRPs~V~g~~~~p~~gw~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~d~vpVDdva 309 (519)
|+..+.+.+.. ..++.+..+.||.|..+...... . ... ............+...+|+|
T Consensus 165 Kaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~---~-----~~~---------~~~~~~~~~~~r~~~pedvA 227 (262)
T 3ksu_A 165 KAPVEHYTRAASKELMKQQISVNAIAPGPMDTSFFYGQE---T-----KES---------TAFHKSQAMGNQLTKIEDIA 227 (262)
T ss_dssp -CHHHHHHHHHHHHTTTTTCEEEEEEECCCCTHHHHTCC-----------------------------CCCCSCCGGGTH
T ss_pred HHHHHHHHHHHHHHHHHcCcEEEEEeeCCCcCccccccC---c-----hHH---------HHHHHhcCcccCCCCHHHHH
Confidence 99999888755 34799999999988664321100 0 000 00011111223467889999
Q ss_pred HHHHHHHHHhccCCCCCcEEEecCCCCCc
Q 010075 310 NAMIVAMVAHAKQPSDANIYHVGSSLRNP 338 (519)
Q Consensus 310 ~aii~a~~~~~~~~~~~~iyni~s~~~~~ 338 (519)
++++.++.. ...-.++++++.+|...+
T Consensus 228 ~~v~~L~s~--~~~itG~~i~vdGg~~~~ 254 (262)
T 3ksu_A 228 PIIKFLTTD--GWWINGQTIFANGGYTTR 254 (262)
T ss_dssp HHHHHHHTT--TTTCCSCEEEESTTCCCC
T ss_pred HHHHHHcCC--CCCccCCEEEECCCccCC
Confidence 999998864 222347899998875543
|
| >3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp} | Back alignment and structure |
|---|
Probab=99.77 E-value=2.5e-17 Score=164.47 Aligned_cols=222 Identities=15% Similarity=0.153 Sum_probs=152.4
Q ss_pred cCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 010075 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (519)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (519)
++||+++||||+|+||++++++|++.| .+|++..|+.... ..+++.+.+ ++ ...++.+
T Consensus 47 l~~k~vlVTGas~GIG~aia~~la~~G---~~V~~~~~~~~~~-~~~~~~~~~----------~~--------~~~~~~~ 104 (294)
T 3r3s_A 47 LKDRKALVTGGDSGIGRAAAIAYAREG---ADVAINYLPAEEE-DAQQVKALI----------EE--------CGRKAVL 104 (294)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHTT---CEEEEECCGGGHH-HHHHHHHHH----------HH--------TTCCEEE
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCC---CEEEEEeCCcchh-HHHHHHHHH----------HH--------cCCcEEE
Confidence 578999999999999999999999999 6778887763321 122222111 11 1357889
Q ss_pred EeccCCCCCCCCChhhhHHHHh-------cCccEEEEcCccCCc--------cccHHHHHHHhHHHHHHHHHHHHhc-cC
Q 010075 90 VPGDISSEDLGLKDSNLKEELW-------NELDIMVNSAAITKF--------DERYDVAFGINTLGVIHLVNFAKKC-VK 153 (519)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~-------~~vdiViH~Aa~v~f--------~~~~~~~~~~Nv~gt~~ll~~a~~~-~~ 153 (519)
+.+|++++ +..+.++ .++|++||+||.... .+.++..+++|+.|+.++++.+... .+
T Consensus 105 ~~~Dv~d~-------~~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~ 177 (294)
T 3r3s_A 105 LPGDLSDE-------SFARSLVHKAREALGGLDILALVAGKQTAIPEIKDLTSEQFQQTFAVNVFALFWITQEAIPLLPK 177 (294)
T ss_dssp CCCCTTSH-------HHHHHHHHHHHHHHTCCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCCT
T ss_pred EEecCCCH-------HHHHHHHHHHHHHcCCCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhhc
Confidence 99999953 2222332 479999999997431 2567888999999999999998764 22
Q ss_pred CceEEEEecceeecCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcHHHH
Q 010075 154 LKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVF 233 (519)
Q Consensus 154 l~~~V~vSTa~v~~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~Y~~ 233 (519)
-.++|++||...+... .....|+.
T Consensus 178 ~g~Iv~isS~~~~~~~--------------------------------------------------------~~~~~Y~a 201 (294)
T 3r3s_A 178 GASIITTSSIQAYQPS--------------------------------------------------------PHLLDYAA 201 (294)
T ss_dssp TCEEEEECCGGGTSCC--------------------------------------------------------TTCHHHHH
T ss_pred CCEEEEECChhhccCC--------------------------------------------------------CCchHHHH
Confidence 3489999998765421 12357999
Q ss_pred HHHHHHHHHHHh-----hcCCcEEEEecCccccCCCCC---CCcccccccccHHHHHHhhcCCceeeccCCCceeeeeeH
Q 010075 234 TKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEP---FPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPV 305 (519)
Q Consensus 234 sK~~aE~lv~~~-----~~~lp~~IvRPs~V~g~~~~p---~~gw~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~d~vpV 305 (519)
||+..+.+.+.. ..++++..++||.|.++.... .+.+.. . .........+...
T Consensus 202 sKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~~~~~~~~----------~---------~~~~~p~~r~~~p 262 (294)
T 3r3s_A 202 TKAAILNYSRGLAKQVAEKGIRVNIVAPGPIWTALQISGGQTQDKIP----------Q---------FGQQTPMKRAGQP 262 (294)
T ss_dssp HHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSHHHHTTTSCGGGST----------T---------TTTTSTTSSCBCG
T ss_pred HHHHHHHHHHHHHHHHhhcCeEEEEEecCcCccccccccCCCHHHHH----------H---------HHhcCCCCCCcCH
Confidence 999999888755 348999999999998864210 000000 0 1111223346778
Q ss_pred HHHHHHHHHHHHHhccCCCCCcEEEecCCCC
Q 010075 306 DMVVNAMIVAMVAHAKQPSDANIYHVGSSLR 336 (519)
Q Consensus 306 Ddva~aii~a~~~~~~~~~~~~iyni~s~~~ 336 (519)
+|+|++++.++..... .-.++++++.+|..
T Consensus 263 ~dvA~~v~~L~s~~~~-~itG~~i~vdGG~~ 292 (294)
T 3r3s_A 263 AELAPVYVYLASQESS-YVTAEVHGVCGGEH 292 (294)
T ss_dssp GGGHHHHHHHHSGGGT-TCCSCEEEESTTCC
T ss_pred HHHHHHHHHHhCcccc-CCCCCEEEECCCcc
Confidence 9999999998864332 22478999988843
|
| >3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str} | Back alignment and structure |
|---|
Probab=99.77 E-value=3.7e-17 Score=159.88 Aligned_cols=225 Identities=10% Similarity=0.082 Sum_probs=151.6
Q ss_pred hcCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceE
Q 010075 9 FLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKIT 88 (519)
Q Consensus 9 ~~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~ 88 (519)
-++||+++||||+|+||+++++.|++.| .+|+++.|+... .+.+.+++ ++ ...++.
T Consensus 3 ~l~~k~vlVTGas~gIG~aia~~l~~~G---~~V~~~~r~~~~---~~~~~~~~---------~~---------~~~~~~ 58 (257)
T 3imf_A 3 AMKEKVVIITGGSSGMGKGMATRFAKEG---ARVVITGRTKEK---LEEAKLEI---------EQ---------FPGQIL 58 (257)
T ss_dssp TTTTCEEEETTTTSHHHHHHHHHHHHTT---CEEEEEESCHHH---HHHHHHHH---------CC---------STTCEE
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHCC---CEEEEEeCCHHH---HHHHHHHH---------Hh---------cCCcEE
Confidence 4679999999999999999999999998 678898887422 22222111 00 135789
Q ss_pred EEeccCCCCCCCCChhhhHHHHh-------cCccEEEEcCccCCc-------cccHHHHHHHhHHHHHHHHHHHHhc---
Q 010075 89 FVPGDISSEDLGLKDSNLKEELW-------NELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKC--- 151 (519)
Q Consensus 89 ~v~gDl~~~~lgls~~~~~~~l~-------~~vdiViH~Aa~v~f-------~~~~~~~~~~Nv~gt~~ll~~a~~~--- 151 (519)
++.+|++++ +..+.++ .++|++||+||.... .+.++..+++|+.|+.++++.+.+.
T Consensus 59 ~~~~Dv~~~-------~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~ 131 (257)
T 3imf_A 59 TVQMDVRNT-------DDIQKMIEQIDEKFGRIDILINNAAGNFICPAEDLSVNGWNSVINIVLNGTFYCSQAIGKYWIE 131 (257)
T ss_dssp EEECCTTCH-------HHHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEccCCCH-------HHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHh
Confidence 999999963 2223333 379999999996432 2567888999999999999887431
Q ss_pred -cCCceEEEEecceeecCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcH
Q 010075 152 -VKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNT 230 (519)
Q Consensus 152 -~~l~~~V~vSTa~v~~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~ 230 (519)
++..++|++||....... .....
T Consensus 132 ~~~~g~iv~isS~~~~~~~--------------------------------------------------------~~~~~ 155 (257)
T 3imf_A 132 KGIKGNIINMVATYAWDAG--------------------------------------------------------PGVIH 155 (257)
T ss_dssp HTCCCEEEEECCGGGGSCC--------------------------------------------------------TTCHH
T ss_pred hCCCcEEEEECchhhccCC--------------------------------------------------------CCcHH
Confidence 245789999997654321 12357
Q ss_pred HHHHHHHHHHHHHHh----h--cCCcEEEEecCccccCCCCCCCcccccccccHHHHHHhhcCCceeeccCCCceeeeee
Q 010075 231 YVFTKTMGEMLMQQS----K--ENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIP 304 (519)
Q Consensus 231 Y~~sK~~aE~lv~~~----~--~~lp~~IvRPs~V~g~~~~p~~gw~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~d~vp 304 (519)
|+.||+..+.+.+.. . .++++..++||.|.++..... .|... ... .... .......+..
T Consensus 156 Y~asKaa~~~l~~~la~e~~~~~gIrvn~v~PG~v~t~~~~~~-~~~~~-~~~----~~~~---------~~~p~~r~~~ 220 (257)
T 3imf_A 156 SAAAKAGVLAMTKTLAVEWGRKYGIRVNAIAPGPIERTGGADK-LWISE-EMA----KRTI---------QSVPLGRLGT 220 (257)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCBSSCCCC---------CCS----HHHH---------TTSTTCSCBC
T ss_pred HHHHHHHHHHHHHHHHHHhccccCeEEEEEEECCCcCCcchhh-cccCH-HHH----HHHH---------hcCCCCCCcC
Confidence 999999998887754 2 389999999999987643210 11110 000 0111 1112234688
Q ss_pred HHHHHHHHHHHHHHhccCCCCCcEEEecCCCC
Q 010075 305 VDMVVNAMIVAMVAHAKQPSDANIYHVGSSLR 336 (519)
Q Consensus 305 VDdva~aii~a~~~~~~~~~~~~iyni~s~~~ 336 (519)
++|+|++++.++..... .-.++++++.+|..
T Consensus 221 pedvA~~v~~L~s~~~~-~itG~~i~vdGG~~ 251 (257)
T 3imf_A 221 PEEIAGLAYYLCSDEAA-YINGTCMTMDGGQH 251 (257)
T ss_dssp HHHHHHHHHHHHSGGGT-TCCSCEEEESTTTT
T ss_pred HHHHHHHHHHHcCchhc-CccCCEEEECCCcc
Confidence 99999999998864332 22478999988854
|
| >4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.76 E-value=2e-17 Score=164.00 Aligned_cols=224 Identities=11% Similarity=0.121 Sum_probs=142.1
Q ss_pred hcCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceE
Q 010075 9 FLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKIT 88 (519)
Q Consensus 9 ~~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~ 88 (519)
-+++|+++||||+|+||+++++.|++.| .+|+++.|.... ..+.+.+++ .. ...++.
T Consensus 26 ~~~~k~~lVTGas~GIG~aia~~la~~G---~~V~~~~~~~~~--~~~~~~~~~---------~~---------~~~~~~ 82 (280)
T 4da9_A 26 QKARPVAIVTGGRRGIGLGIARALAASG---FDIAITGIGDAE--GVAPVIAEL---------SG---------LGARVI 82 (280)
T ss_dssp CCCCCEEEEETTTSHHHHHHHHHHHHTT---CEEEEEESCCHH--HHHHHHHHH---------HH---------TTCCEE
T ss_pred ccCCCEEEEecCCCHHHHHHHHHHHHCC---CeEEEEeCCCHH--HHHHHHHHH---------Hh---------cCCcEE
Confidence 3578999999999999999999999998 678888864321 122222111 11 125789
Q ss_pred EEeccCCCCCCCCChhhhHHHHh-------cCccEEEEcCccCC-----c----cccHHHHHHHhHHHHHHHHHHHHhc-
Q 010075 89 FVPGDISSEDLGLKDSNLKEELW-------NELDIMVNSAAITK-----F----DERYDVAFGINTLGVIHLVNFAKKC- 151 (519)
Q Consensus 89 ~v~gDl~~~~lgls~~~~~~~l~-------~~vdiViH~Aa~v~-----f----~~~~~~~~~~Nv~gt~~ll~~a~~~- 151 (519)
++.+|+++++ ..+.++ .++|++||+||... + .+.++..+++|+.|+.++++.+.+.
T Consensus 83 ~~~~Dv~d~~-------~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~ 155 (280)
T 4da9_A 83 FLRADLADLS-------SHQATVDAVVAEFGRIDCLVNNAGIASIVRDDFLDLKPENFDTIVGVNLRGTVFFTQAVLKAM 155 (280)
T ss_dssp EEECCTTSGG-------GHHHHHHHHHHHHSCCCEEEEECC------CCGGGCCHHHHHHHTTTHHHHHHHHHHHHHHHH
T ss_pred EEEecCCCHH-------HHHHHHHHHHHHcCCCCEEEECCCccccCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHH
Confidence 9999999642 222333 37999999999732 1 2567788999999999998887543
Q ss_pred --cC---CceEEEEecceeecCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCC
Q 010075 152 --VK---LKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHG 226 (519)
Q Consensus 152 --~~---l~~~V~vSTa~v~~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~ 226 (519)
.+ ..++|++||....... .
T Consensus 156 ~~~~~~~~g~Iv~isS~~~~~~~--------------------------------------------------------~ 179 (280)
T 4da9_A 156 LASDARASRSIINITSVSAVMTS--------------------------------------------------------P 179 (280)
T ss_dssp HHHCCCCCEEEEEECCC---------------------------------------------------------------
T ss_pred HHhCCCCCCEEEEEcchhhccCC--------------------------------------------------------C
Confidence 11 4689999997654211 1
Q ss_pred CCcHHHHHHHHHHHHHHHh-----hcCCcEEEEecCccccCCCCCCCcccccccccHHHHHHhhcCCceeeccCCCceee
Q 010075 227 WPNTYVFTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMD 301 (519)
Q Consensus 227 ~~n~Y~~sK~~aE~lv~~~-----~~~lp~~IvRPs~V~g~~~~p~~gw~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~d 301 (519)
....|+.||+..+.+.+.. ..++++..++||.|.++......+. ....... .......
T Consensus 180 ~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~---------~~~~~~~--------~~~p~~r 242 (280)
T 4da9_A 180 ERLDYCMSKAGLAAFSQGLALRLAETGIAVFEVRPGIIRSDMTAAVSGK---------YDGLIES--------GLVPMRR 242 (280)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCC---------------------------------------C
T ss_pred CccHHHHHHHHHHHHHHHHHHHHHHhCcEEEEEeecCCcCCchhhcchh---------HHHHHhh--------cCCCcCC
Confidence 2357999999999888765 3579999999999987654321110 0000000 0112234
Q ss_pred eeeHHHHHHHHHHHHHHhccCCCCCcEEEecCCCC
Q 010075 302 VIPVDMVVNAMIVAMVAHAKQPSDANIYHVGSSLR 336 (519)
Q Consensus 302 ~vpVDdva~aii~a~~~~~~~~~~~~iyni~s~~~ 336 (519)
+..++|+|++++.++..... .-.++++++.+|..
T Consensus 243 ~~~pedvA~~v~~L~s~~~~-~itG~~i~vdGG~~ 276 (280)
T 4da9_A 243 WGEPEDIGNIVAGLAGGQFG-FATGSVIQADGGLS 276 (280)
T ss_dssp CBCHHHHHHHHHHHHTSTTG-GGTTCEEEESTTCC
T ss_pred cCCHHHHHHHHHHHhCcccc-CCCCCEEEECCCcc
Confidence 67899999999988863321 12378999988843
|
| >3uxy_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: NAD; 2.10A {Rhodobacter sphaeroides} | Back alignment and structure |
|---|
Probab=99.76 E-value=1.5e-17 Score=163.55 Aligned_cols=217 Identities=16% Similarity=0.175 Sum_probs=148.6
Q ss_pred cCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 010075 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (519)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (519)
++||+|+||||+|+||++++++|++.| .+|+++.|+.... .....
T Consensus 26 l~gk~vlVTGas~gIG~aia~~la~~G---~~V~~~~r~~~~~--------------------------------~~~~~ 70 (266)
T 3uxy_A 26 FEGKVALVTGAAGGIGGAVVTALRAAG---ARVAVADRAVAGI--------------------------------AADLH 70 (266)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHHHTT---CEEEECSSCCTTS--------------------------------CCSEE
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCC---CEEEEEeCCHHHH--------------------------------Hhhhc
Confidence 578999999999999999999999998 6788888865321 12244
Q ss_pred EeccCCCCCCCCChhhhHHHH-------hcCccEEEEcCccCCc-------cccHHHHHHHhHHHHHHHHHHHHhc---c
Q 010075 90 VPGDISSEDLGLKDSNLKEEL-------WNELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKC---V 152 (519)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l-------~~~vdiViH~Aa~v~f-------~~~~~~~~~~Nv~gt~~ll~~a~~~---~ 152 (519)
+.+|++++ +..+.+ ..++|++||+||.... .+.++..+++|+.|+.++++.+... .
T Consensus 71 ~~~Dv~~~-------~~~~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~ 143 (266)
T 3uxy_A 71 LPGDLREA-------AYADGLPGAVAAGLGRLDIVVNNAGVISRGRITETTDADWSLSLGVNVEAPFRICRAAIPLMAAA 143 (266)
T ss_dssp CCCCTTSH-------HHHHHHHHHHHHHHSCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH
T ss_pred cCcCCCCH-------HHHHHHHHHHHHhcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc
Confidence 58899853 222232 2479999999998643 2567888999999999999988321 2
Q ss_pred CCceEEEEecceeecCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcHHH
Q 010075 153 KLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYV 232 (519)
Q Consensus 153 ~l~~~V~vSTa~v~~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~Y~ 232 (519)
+..++|++||...+... .....|+
T Consensus 144 ~~g~iv~isS~~~~~~~--------------------------------------------------------~~~~~Y~ 167 (266)
T 3uxy_A 144 GGGAIVNVASCWGLRPG--------------------------------------------------------PGHALYC 167 (266)
T ss_dssp TCEEEEEECCSBTTBCC--------------------------------------------------------TTBHHHH
T ss_pred CCcEEEEECCHHhCCCC--------------------------------------------------------CCChHHH
Confidence 56799999997654211 2235799
Q ss_pred HHHHHHHHHHHHh-----hcCCcEEEEecCccccCCCCCCCcccccccccHHHHHHhhcCCceeeccCCCceeeeeeHHH
Q 010075 233 FTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDM 307 (519)
Q Consensus 233 ~sK~~aE~lv~~~-----~~~lp~~IvRPs~V~g~~~~p~~gw~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~d~vpVDd 307 (519)
.||+..|.+.+.+ ..++++.+++||.|.++..... +............... .......+..++|
T Consensus 168 asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~--~~~~~~~~~~~~~~~~---------~~~p~~r~~~ped 236 (266)
T 3uxy_A 168 LTKAALASLTQCMGMDHAPQGIRINAVCPNEVNTPMLRTG--FAKRGFDPDRAVAELG---------RTVPLGRIAEPED 236 (266)
T ss_dssp HHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCCHHHHHH--HHHTTCCHHHHHHHHH---------TTSTTSSCBCHHH
T ss_pred HHHHHHHHHHHHHHHHhhhcCcEEEEEeeCCCcchHhhhh--hhcccccchHHHHHHH---------hcCCCCCCcCHHH
Confidence 9999999988755 3479999999999987642100 0000000111111111 1223345788999
Q ss_pred HHHHHHHHHHHhccCCCCCcEEEecCCCC
Q 010075 308 VVNAMIVAMVAHAKQPSDANIYHVGSSLR 336 (519)
Q Consensus 308 va~aii~a~~~~~~~~~~~~iyni~s~~~ 336 (519)
+|++++.++..... .-.++++++.+|..
T Consensus 237 vA~~v~~L~s~~~~-~itG~~i~vdGG~~ 264 (266)
T 3uxy_A 237 IADVVLFLASDAAR-YLCGSLVEVNGGKA 264 (266)
T ss_dssp HHHHHHHHHSGGGT-TCCSCEEEESTTCC
T ss_pred HHHHHHHHhCchhc-CCcCCEEEECcCEe
Confidence 99999998864332 22478999988843
|
| >3u9l_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.10A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.76 E-value=3.8e-17 Score=165.41 Aligned_cols=171 Identities=16% Similarity=0.225 Sum_probs=121.5
Q ss_pred cCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCccc--HHHHHHHHHhhhhhHHHHHhhhccccccccCCce
Q 010075 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDS--AALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKI 87 (519)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~--~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v 87 (519)
+++|+||||||||+||+++++.|++.| .+|++.+|+..+.. ..+.+.+. ++. . ..++
T Consensus 3 m~~k~vlVTGas~GIG~aia~~L~~~G---~~V~~~~r~~~~r~~~~~~~l~~~---------~~~-~--------~~~~ 61 (324)
T 3u9l_A 3 MSKKIILITGASSGFGRLTAEALAGAG---HRVYASMRDIVGRNASNVEAIAGF---------ARD-N--------DVDL 61 (324)
T ss_dssp --CCEEEESSCSSHHHHHHHHHHHHTT---CEEEEEESCTTTTTHHHHHHHHHH---------HHH-H--------TCCE
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCC---CEEEEecCcccccCHHHHHHHHHH---------HHh-c--------CCcE
Confidence 357999999999999999999999999 68899999743322 22222211 111 1 2578
Q ss_pred EEEeccCCCCCCCCChhhhHHHHhc-------CccEEEEcCccCCc-------cccHHHHHHHhHHHHHHHHHHHHhc--
Q 010075 88 TFVPGDISSEDLGLKDSNLKEELWN-------ELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKC-- 151 (519)
Q Consensus 88 ~~v~gDl~~~~lgls~~~~~~~l~~-------~vdiViH~Aa~v~f-------~~~~~~~~~~Nv~gt~~ll~~a~~~-- 151 (519)
.++.+|++++ +..+.+++ ++|+|||+||.... .+.++..+++|+.|+.++++.+...
T Consensus 62 ~~~~~Dvtd~-------~~v~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~a~lp~m~ 134 (324)
T 3u9l_A 62 RTLELDVQSQ-------VSVDRAIDQIIGEDGRIDVLIHNAGHMVFGPAEAFTPEQFAELYDINVLSTQRVNRAALPHMR 134 (324)
T ss_dssp EEEECCTTCH-------HHHHHHHHHHHHHHSCCSEEEECCCCCBCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHH
T ss_pred EEEEeecCCH-------HHHHHHHHHHHHHcCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHH
Confidence 9999999953 32334443 79999999997532 2467788999999999999988321
Q ss_pred -cCCceEEEEecceeecCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcH
Q 010075 152 -VKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNT 230 (519)
Q Consensus 152 -~~l~~~V~vSTa~v~~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~ 230 (519)
.+..++|++||........ +....
T Consensus 135 ~~~~g~iV~isS~~~~~~~~-------------------------------------------------------~~~~~ 159 (324)
T 3u9l_A 135 RQKHGLLIWISSSSSAGGTP-------------------------------------------------------PYLAP 159 (324)
T ss_dssp HHTCEEEEEECCGGGTSCCC-------------------------------------------------------SSCHH
T ss_pred hcCCCEEEEEecchhccCCC-------------------------------------------------------Ccchh
Confidence 3668999999986542110 12357
Q ss_pred HHHHHHHHHHHHHHh-----hcCCcEEEEecCccccCC
Q 010075 231 YVFTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTY 263 (519)
Q Consensus 231 Y~~sK~~aE~lv~~~-----~~~lp~~IvRPs~V~g~~ 263 (519)
|+.||+..|.+.+.+ ..++++++++||.|.++.
T Consensus 160 Y~asKaa~~~~~~~la~el~~~gI~v~~v~PG~v~t~~ 197 (324)
T 3u9l_A 160 YFAAKAAMDAIAVQYARELSRWGIETSIIVPGAFTSGT 197 (324)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECCC----
T ss_pred HHHHHHHHHHHHHHHHHHhhhhCcEEEEEECCccccCc
Confidence 999999999988765 348999999999997653
|
| >1o5i_A 3-oxoacyl-(acyl carrier protein) reductase; TM1169, structur genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.76 E-value=3.6e-17 Score=159.19 Aligned_cols=216 Identities=13% Similarity=0.066 Sum_probs=145.4
Q ss_pred chhhhcCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccC
Q 010075 5 SVVEFLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFIS 84 (519)
Q Consensus 5 ~i~~~~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~ 84 (519)
+...-++||+|+||||||+||++++++|++.| .+|+++.|+. +.+. + .
T Consensus 12 ~~~~~~~~k~vlVTGas~gIG~~~a~~l~~~G---~~V~~~~r~~------~~~~-~----------------------~ 59 (249)
T 1o5i_A 12 HMELGIRDKGVLVLAASRGIGRAVADVLSQEG---AEVTICARNE------ELLK-R----------------------S 59 (249)
T ss_dssp ----CCTTCEEEEESCSSHHHHHHHHHHHHTT---CEEEEEESCH------HHHH-H----------------------T
T ss_pred hHHhccCCCEEEEECCCCHHHHHHHHHHHHCC---CEEEEEcCCH------HHHH-h----------------------h
Confidence 34556889999999999999999999999998 6789998864 1111 0 0
Q ss_pred CceEEEeccCCCCCCCCChhhhHHHHhcCccEEEEcCccCCc-------cccHHHHHHHhHHHHHHHHHHH----HhccC
Q 010075 85 EKITFVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFA----KKCVK 153 (519)
Q Consensus 85 ~~v~~v~gDl~~~~lgls~~~~~~~l~~~vdiViH~Aa~v~f-------~~~~~~~~~~Nv~gt~~ll~~a----~~~~~ 153 (519)
.++.++ +|+.+ + ..... ....++|+|||+||.... .+.++..+++|+.|+.++.+.+ ++. +
T Consensus 60 ~~~~~~-~D~~~-~----~~~~~-~~~~~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~-~ 131 (249)
T 1o5i_A 60 GHRYVV-CDLRK-D----LDLLF-EKVKEVDILVLNAGGPKAGFFDELTNEDFKEAIDSLFLNMIKIVRNYLPAMKEK-G 131 (249)
T ss_dssp CSEEEE-CCTTT-C----HHHHH-HHSCCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-T
T ss_pred CCeEEE-eeHHH-H----HHHHH-HHhcCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc-C
Confidence 245667 99831 1 22222 333489999999997543 2457788999999987765544 332 5
Q ss_pred CceEEEEecceeecCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcHHHH
Q 010075 154 LKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVF 233 (519)
Q Consensus 154 l~~~V~vSTa~v~~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~Y~~ 233 (519)
..++|++||...+... .....|+.
T Consensus 132 ~g~iv~isS~~~~~~~--------------------------------------------------------~~~~~Y~~ 155 (249)
T 1o5i_A 132 WGRIVAITSFSVISPI--------------------------------------------------------ENLYTSNS 155 (249)
T ss_dssp CEEEEEECCGGGTSCC--------------------------------------------------------TTBHHHHH
T ss_pred CcEEEEEcchHhcCCC--------------------------------------------------------CCCchHHH
Confidence 6899999998765421 12357999
Q ss_pred HHHHHHHHHHHh-----hcCCcEEEEecCccccCCCCCCCcccccccccHHHHH-HhhcCCceeeccCCCceeeeeeHHH
Q 010075 234 TKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFV-ASAQGNLRCLVGETKVIMDVIPVDM 307 (519)
Q Consensus 234 sK~~aE~lv~~~-----~~~lp~~IvRPs~V~g~~~~p~~gw~~~~~~~~~~i~-~~~~g~~~~~~~~~~~~~d~vpVDd 307 (519)
||+..+.+.+.. ..++++.+++||.|.++.... + ...... ..... .....+++++|
T Consensus 156 sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~---~------~~~~~~~~~~~~---------~p~~~~~~~~d 217 (249)
T 1o5i_A 156 ARMALTGFLKTLSFEVAPYGITVNCVAPGWTETERVKE---L------LSEEKKKQVESQ---------IPMRRMAKPEE 217 (249)
T ss_dssp HHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTHHH---H------SCHHHHHHHHTT---------STTSSCBCHHH
T ss_pred HHHHHHHHHHHHHHHhhhcCeEEEEEeeCCCccCcccc---c------chhhHHHHHHhc---------CCCCCCcCHHH
Confidence 999999888754 358999999999998864311 0 001111 11111 11234789999
Q ss_pred HHHHHHHHHHHhccCCCCCcEEEecCCC
Q 010075 308 VVNAMIVAMVAHAKQPSDANIYHVGSSL 335 (519)
Q Consensus 308 va~aii~a~~~~~~~~~~~~iyni~s~~ 335 (519)
+|++++.++..... ...+++|++.+|.
T Consensus 218 vA~~i~~l~s~~~~-~~tG~~~~vdgG~ 244 (249)
T 1o5i_A 218 IASVVAFLCSEKAS-YLTGQTIVVDGGL 244 (249)
T ss_dssp HHHHHHHHHSGGGT-TCCSCEEEESTTC
T ss_pred HHHHHHHHcCcccc-CCCCCEEEECCCc
Confidence 99999988864322 2237899998874
|
| >1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A* | Back alignment and structure |
|---|
Probab=99.76 E-value=2.5e-17 Score=163.39 Aligned_cols=233 Identities=13% Similarity=0.110 Sum_probs=152.5
Q ss_pred cCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 010075 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (519)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (519)
++||+++||||+|+||++++++|++.| .+|+++.|+.... .+.+.++ +++ ...++.+
T Consensus 27 ~~~k~vlVTGas~gIG~~ia~~l~~~G---~~V~~~~r~~~~~--~~~~~~~---------~~~---------~~~~~~~ 83 (283)
T 1g0o_A 27 LEGKVALVTGAGRGIGREMAMELGRRG---CKVIVNYANSTES--AEEVVAA---------IKK---------NGSDAAC 83 (283)
T ss_dssp CTTCEEEETTTTSHHHHHHHHHHHHTT---CEEEEEESSCHHH--HHHHHHH---------HHH---------TTCCEEE
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCC---CEEEEEeCCchHH--HHHHHHH---------HHH---------hCCCeEE
Confidence 678999999999999999999999998 6788988875321 1111111 111 0256889
Q ss_pred EeccCCCCCCCCChhhhHHHH-------hcCccEEEEcCccCCc-------cccHHHHHHHhHHHHHHHHHHHHhc-cCC
Q 010075 90 VPGDISSEDLGLKDSNLKEEL-------WNELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKC-VKL 154 (519)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l-------~~~vdiViH~Aa~v~f-------~~~~~~~~~~Nv~gt~~ll~~a~~~-~~l 154 (519)
+.+|++++ ++ .+.+ ..++|+|||+||.... .+.++..+++|+.|+.++++.+.+. ++.
T Consensus 84 ~~~D~~~~------~~-~~~~~~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~ 156 (283)
T 1g0o_A 84 VKANVGVV------ED-IVRMFEEAVKIFGKLDIVCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFVAREAYKHLEIG 156 (283)
T ss_dssp EECCTTCH------HH-HHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSCTT
T ss_pred EEcCCCCH------HH-HHHHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhcC
Confidence 99999963 22 2232 2479999999997643 2567888999999999999998764 345
Q ss_pred ceEEEEecceeecCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcHHHHH
Q 010075 155 KVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFT 234 (519)
Q Consensus 155 ~~~V~vSTa~v~~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~Y~~s 234 (519)
.++|++||........ .....|+.|
T Consensus 157 g~iv~isS~~~~~~~~-------------------------------------------------------~~~~~Y~as 181 (283)
T 1g0o_A 157 GRLILMGSITGQAKAV-------------------------------------------------------PKHAVYSGS 181 (283)
T ss_dssp CEEEEECCGGGTCSSC-------------------------------------------------------SSCHHHHHH
T ss_pred CeEEEEechhhccCCC-------------------------------------------------------CCCcchHHH
Confidence 7999999975432110 124579999
Q ss_pred HHHHHHHHHHh-----hcCCcEEEEecCccccCCCCCC-Cccccccc-ccHHHHHHhhcCCceeeccCCCceeeeeeHHH
Q 010075 235 KTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPF-PGWVEDLK-TINTLFVASAQGNLRCLVGETKVIMDVIPVDM 307 (519)
Q Consensus 235 K~~aE~lv~~~-----~~~lp~~IvRPs~V~g~~~~p~-~gw~~~~~-~~~~~i~~~~~g~~~~~~~~~~~~~d~vpVDd 307 (519)
|+..|.+.+.. ..++++.+++||.|.++..... ..+..... ............ . ......+...+|
T Consensus 182 K~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~--~~p~~r~~~p~d 254 (283)
T 1g0o_A 182 KGAIETFARCMAIDMADKKITVNVVAPGGIKTDMYHAVCREYIPNGENLSNEEVDEYAAV-----Q--WSPLRRVGLPID 254 (283)
T ss_dssp HHHHHHHHHHHHHHHGGGTCEEEEEEECCBSSHHHHHHGGGGSTTCTTCCHHHHHHHHHH-----H--SCTTCSCBCHHH
T ss_pred HHHHHHHHHHHHHHhcccCeEEEEEecCcccchhhhhhhhhccccccccCHHHHHHHHhh-----c--CCCCCCCcCHHH
Confidence 99999888754 3589999999999987632110 00000000 001111111110 0 011123678999
Q ss_pred HHHHHHHHHHHhccCCCCCcEEEecCCC
Q 010075 308 VVNAMIVAMVAHAKQPSDANIYHVGSSL 335 (519)
Q Consensus 308 va~aii~a~~~~~~~~~~~~iyni~s~~ 335 (519)
+|++++.++..... .-.++++++.+|.
T Consensus 255 vA~~v~~l~s~~~~-~itG~~i~vdgG~ 281 (283)
T 1g0o_A 255 IARVVCFLASNDGG-WVTGKVIGIDGGA 281 (283)
T ss_dssp HHHHHHHHHSGGGT-TCCSCEEEESTTC
T ss_pred HHHHHHHHhCcccc-CcCCCEEEeCCCc
Confidence 99999998864332 2236889998773
|
| >3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.76 E-value=5.7e-17 Score=160.79 Aligned_cols=247 Identities=16% Similarity=0.178 Sum_probs=156.2
Q ss_pred cCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCccc------HHHHHHHHHhhhhhHHHHHhhhcccccccc
Q 010075 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDS------AALRFQNEVLAKDVFNVLKEKWGTRLNSFI 83 (519)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~------~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~ 83 (519)
++||+||||||+|+||++++++|++.| .+|+++.|+..... ..+++.+ .. ..+.. .
T Consensus 8 l~gk~vlVTGas~gIG~~ia~~l~~~G---~~V~~~~~~~~~~~~~~~~~~~~~~~~-~~-----~~~~~---------~ 69 (287)
T 3pxx_A 8 VQDKVVLVTGGARGQGRSHAVKLAEEG---ADIILFDICHDIETNEYPLATSRDLEE-AG-----LEVEK---------T 69 (287)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHTT---CEEEEEECCSCCTTSCSCCCCHHHHHH-HH-----HHHHH---------T
T ss_pred cCCCEEEEeCCCChHHHHHHHHHHHCC---CeEEEEcccccccccccchhhhHHHHH-HH-----HHHHh---------c
Confidence 679999999999999999999999998 67889888732211 0111110 00 00111 1
Q ss_pred CCceEEEeccCCCCCCCCChhhhHHHHh-------cCccEEEEcCccCCc-----cccHHHHHHHhHHHHHHHHHHHHhc
Q 010075 84 SEKITFVPGDISSEDLGLKDSNLKEELW-------NELDIMVNSAAITKF-----DERYDVAFGINTLGVIHLVNFAKKC 151 (519)
Q Consensus 84 ~~~v~~v~gDl~~~~lgls~~~~~~~l~-------~~vdiViH~Aa~v~f-----~~~~~~~~~~Nv~gt~~ll~~a~~~ 151 (519)
..++.++.+|++++ +..+.++ .++|++||+||.... .+.++..+++|+.|+.++++.+...
T Consensus 70 ~~~~~~~~~D~~~~-------~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~ 142 (287)
T 3pxx_A 70 GRKAYTAEVDVRDR-------AAVSRELANAVAEFGKLDVVVANAGICPLGAHLPVQAFADAFDVDFVGVINTVHAALPY 142 (287)
T ss_dssp TSCEEEEECCTTCH-------HHHHHHHHHHHHHHSCCCEEEECCCCCCCCTTCCTHHHHHHHHHHTHHHHHHHHHHGGG
T ss_pred CCceEEEEccCCCH-------HHHHHHHHHHHHHcCCCCEEEECCCcCcccCcCCHHHHHHHhhhhhhhhHHHHHHHHHH
Confidence 36789999999963 2223333 379999999998643 3568889999999999999998764
Q ss_pred -cCCceEEEEecceeecCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcH
Q 010075 152 -VKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNT 230 (519)
Q Consensus 152 -~~l~~~V~vSTa~v~~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~ 230 (519)
.+-.++|++||...+..... .+..+..+ ......
T Consensus 143 ~~~~g~iv~isS~~~~~~~~~----~~~~~~~~-----------------------------------------~~~~~~ 177 (287)
T 3pxx_A 143 LTSGASIITTGSVAGLIAAAQ----PPGAGGPQ-----------------------------------------GPGGAG 177 (287)
T ss_dssp CCTTCEEEEECCHHHHHHHHC----CC-----C-----------------------------------------HHHHHH
T ss_pred hhcCcEEEEeccchhcccccc----cccccccC-----------------------------------------CCccch
Confidence 34468999999876542210 00000000 011246
Q ss_pred HHHHHHHHHHHHHHh-----hcCCcEEEEecCccccCCCCCCCcc---ccccc--ccHHHHHHhhcCCceeeccCCCcee
Q 010075 231 YVFTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGW---VEDLK--TINTLFVASAQGNLRCLVGETKVIM 300 (519)
Q Consensus 231 Y~~sK~~aE~lv~~~-----~~~lp~~IvRPs~V~g~~~~p~~gw---~~~~~--~~~~~i~~~~~g~~~~~~~~~~~~~ 300 (519)
|+.||+..+.+.+.. ..++++..++||.|.++.....+.+ ..... ......... ........
T Consensus 178 Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~ 249 (287)
T 3pxx_A 178 YSYAKQLVDSYTLQLAAQLAPQSIRANVIHPTNVNTDMLNSAPMYRQFRPDLEAPSRADALLAF--------PAMQAMPT 249 (287)
T ss_dssp HHHHHHHHHHHHHHHHHHHGGGTCEEEEEEESSBSSTTTSSHHHHHHHCTTSSSCCHHHHHHHG--------GGGCSSSC
T ss_pred HHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCccccccccccchhhhhccccccchhHHHHhhh--------hhhcccCC
Confidence 999999999988765 3489999999999988754321100 00000 000000000 00111114
Q ss_pred eeeeHHHHHHHHHHHHHHhccCCCCCcEEEecCCC
Q 010075 301 DVIPVDMVVNAMIVAMVAHAKQPSDANIYHVGSSL 335 (519)
Q Consensus 301 d~vpVDdva~aii~a~~~~~~~~~~~~iyni~s~~ 335 (519)
.+..++|+|++++.++..... --.++++++.+|.
T Consensus 250 ~~~~p~dva~~v~fL~s~~a~-~itG~~i~vdGG~ 283 (287)
T 3pxx_A 250 PYVEASDISNAVCFLASDESR-YVTGLQFKVDAGA 283 (287)
T ss_dssp SCBCHHHHHHHHHHHHSGGGT-TCCSCEEEESTTG
T ss_pred CCCCHHHHHhhHheecchhhc-CCCCceEeECchh
Confidence 678999999999998864322 2247899998883
|
| >4iiu_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAP; 2.10A {Escherichia coli} PDB: 4iiv_A* | Back alignment and structure |
|---|
Probab=99.76 E-value=2.5e-17 Score=161.88 Aligned_cols=221 Identities=10% Similarity=0.045 Sum_probs=147.9
Q ss_pred hhcCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCce
Q 010075 8 EFLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKI 87 (519)
Q Consensus 8 ~~~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v 87 (519)
..+.+|+|+||||+|+||+++++.|++.| .+|+++.+.... ..+... +.+.+. ..++
T Consensus 22 ~~l~~k~vlVTGas~gIG~~la~~l~~~G---~~v~i~~~r~~~--~~~~~~---------~~l~~~---------~~~~ 78 (267)
T 4iiu_A 22 SNAMSRSVLVTGASKGIGRAIARQLAADG---FNIGVHYHRDAA--GAQETL---------NAIVAN---------GGNG 78 (267)
T ss_dssp ---CCCEEEETTTTSHHHHHHHHHHHHTT---CEEEEEESSCHH--HHHHHH---------HHHHHT---------TCCE
T ss_pred cccCCCEEEEECCCChHHHHHHHHHHHCC---CEEEEEeCCchH--HHHHHH---------HHHHhc---------CCce
Confidence 34578999999999999999999999998 567666654321 111111 111111 2578
Q ss_pred EEEeccCCCCCCCCChhhhHHHHh-------cCccEEEEcCccCCc-------cccHHHHHHHhHHHHHHHHHHHHh---
Q 010075 88 TFVPGDISSEDLGLKDSNLKEELW-------NELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKK--- 150 (519)
Q Consensus 88 ~~v~gDl~~~~lgls~~~~~~~l~-------~~vdiViH~Aa~v~f-------~~~~~~~~~~Nv~gt~~ll~~a~~--- 150 (519)
.++.+|++++ +..+.++ .++|+|||+||.... .+.++..+++|+.|+.++++.+..
T Consensus 79 ~~~~~Dl~~~-------~~~~~~~~~~~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~ 151 (267)
T 4iiu_A 79 RLLSFDVANR-------EQCREVLEHEIAQHGAWYGVVSNAGIARDAAFPALSNDDWDAVIHTNLDSFYNVIQPCIMPMI 151 (267)
T ss_dssp EEEECCTTCH-------HHHHHHHHHHHHHHCCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHH
T ss_pred EEEEecCCCH-------HHHHHHHHHHHHHhCCccEEEECCCCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHH
Confidence 9999999963 2223333 379999999997642 256788899999999999987631
Q ss_pred -ccCCceEEEEecceeecCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCc
Q 010075 151 -CVKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPN 229 (519)
Q Consensus 151 -~~~l~~~V~vSTa~v~~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n 229 (519)
..+..++|++||...+... ....
T Consensus 152 ~~~~~g~iv~isS~~~~~~~--------------------------------------------------------~~~~ 175 (267)
T 4iiu_A 152 GARQGGRIITLSSVSGVMGN--------------------------------------------------------RGQV 175 (267)
T ss_dssp HHTSCEEEEEECCHHHHHCC--------------------------------------------------------TTCH
T ss_pred hcCCCcEEEEEcchHhccCC--------------------------------------------------------CCCc
Confidence 1356799999997554211 2245
Q ss_pred HHHHHHHHHHHHHHHh-----hcCCcEEEEecCccccCCCCCCCcccccccccHHHHHHhhcCCceeeccCCCceeeeee
Q 010075 230 TYVFTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIP 304 (519)
Q Consensus 230 ~Y~~sK~~aE~lv~~~-----~~~lp~~IvRPs~V~g~~~~p~~gw~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~d~vp 304 (519)
.|+.||+..+.+.+.. ..++++.+++||.|.++..... ........... ....+..
T Consensus 176 ~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~----------~~~~~~~~~~~---------p~~~~~~ 236 (267)
T 4iiu_A 176 NYSAAKAGIIGATKALAIELAKRKITVNCIAPGLIDTGMIEME----------ESALKEAMSMI---------PMKRMGQ 236 (267)
T ss_dssp HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSTTCCCC----------HHHHHHHHHTC---------TTCSCBC
T ss_pred hhHHHHHHHHHHHHHHHHHHhhcCeEEEEEEEeeecCCccccc----------HHHHHHHHhcC---------CCCCCcC
Confidence 7999999777766543 4479999999999988654321 11222222111 1234678
Q ss_pred HHHHHHHHHHHHHHhccCCCCCcEEEecCC
Q 010075 305 VDMVVNAMIVAMVAHAKQPSDANIYHVGSS 334 (519)
Q Consensus 305 VDdva~aii~a~~~~~~~~~~~~iyni~s~ 334 (519)
++|+|++++.++..... .-.++++++.+|
T Consensus 237 ~edva~~~~~L~s~~~~-~itG~~i~vdGG 265 (267)
T 4iiu_A 237 AEEVAGLASYLMSDIAG-YVTRQVISINGG 265 (267)
T ss_dssp HHHHHHHHHHHHSGGGT-TCCSCEEEESTT
T ss_pred HHHHHHHHHHHhCCccc-CccCCEEEeCCC
Confidence 99999999998864332 224789999876
|
| >1yo6_A Putative carbonyl reductase sniffer; tyrosine-dependent oxidoreductase (SDR family), structural genomics, PSI; 2.60A {Caenorhabditis elegans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.76 E-value=1.6e-17 Score=160.63 Aligned_cols=209 Identities=10% Similarity=0.160 Sum_probs=138.5
Q ss_pred cCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 010075 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (519)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (519)
|++|+|+||||+|+||++++++|++.|.. .+|+++.|+.... +.+. +. ...++.+
T Consensus 1 m~~k~vlItGasggiG~~la~~l~~~g~~-~~V~~~~r~~~~~---~~l~-------------~~--------~~~~~~~ 55 (250)
T 1yo6_A 1 MSPGSVVVTGANRGIGLGLVQQLVKDKNI-RHIIATARDVEKA---TELK-------------SI--------KDSRVHV 55 (250)
T ss_dssp CCCSEEEESSCSSHHHHHHHHHHHTCTTC-CEEEEEESSGGGC---HHHH-------------TC--------CCTTEEE
T ss_pred CCCCEEEEecCCchHHHHHHHHHHhcCCC-cEEEEEecCHHHH---HHHH-------------hc--------cCCceEE
Confidence 46799999999999999999999998732 4788999975432 1121 10 1257899
Q ss_pred EeccCCCCCCCCChhhhHHHHhc---------CccEEEEcCccCC-c-------cccHHHHHHHhHHHHHHHHHHHHhc-
Q 010075 90 VPGDISSEDLGLKDSNLKEELWN---------ELDIMVNSAAITK-F-------DERYDVAFGINTLGVIHLVNFAKKC- 151 (519)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~~---------~vdiViH~Aa~v~-f-------~~~~~~~~~~Nv~gt~~ll~~a~~~- 151 (519)
+.+|++++ +..+.+++ ++|+|||+||... . .+.++..+++|+.|+.++++.+...
T Consensus 56 ~~~D~~~~-------~~~~~~~~~~~~~~g~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~ 128 (250)
T 1yo6_A 56 LPLTVTCD-------KSLDTFVSKVGEIVGSDGLSLLINNAGVLLSYGTNTEPNRAVIAEQLDVNTTSVVLLTQKLLPLL 128 (250)
T ss_dssp EECCTTCH-------HHHHHHHHHHHHHHGGGCCCEEEECCCCCCCBCTTSCCCHHHHHHHHHHHTHHHHHHHHHTHHHH
T ss_pred EEeecCCH-------HHHHHHHHHHHHhcCCCCCcEEEECCcccCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHH
Confidence 99999953 22334443 8999999999765 1 2457788999999999998887543
Q ss_pred --c------C-----CceEEEEecceeecCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhcc
Q 010075 152 --V------K-----LKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLG 218 (519)
Q Consensus 152 --~------~-----l~~~V~vSTa~v~~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg 218 (519)
. + ..+||++||...+.... .+..+
T Consensus 129 ~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~---~~~~~---------------------------------------- 165 (250)
T 1yo6_A 129 KNAASKESGDQLSVSRAAVITISSGLGSITDN---TSGSA---------------------------------------- 165 (250)
T ss_dssp HHHHHSSCSSCCCTTTCEEEEECCGGGCSTTC---CSTTS----------------------------------------
T ss_pred hhcccccCCCcccCCCcEEEEeccCccccCCc---ccccc----------------------------------------
Confidence 1 2 67999999986643221 00000
Q ss_pred ccccccCCCCcHHHHHHHHHHHHHHHh-----hcCCcEEEEecCccccCCCCCCCcccccccccHHHHHHhhcCCceeec
Q 010075 219 TERAKLHGWPNTYVFTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLV 293 (519)
Q Consensus 219 ~~~~~~~~~~n~Y~~sK~~aE~lv~~~-----~~~lp~~IvRPs~V~g~~~~p~~gw~~~~~~~~~~i~~~~~g~~~~~~ 293 (519)
..+...|+.||+..|.+++.+ ..++.+.+++||.|.++....
T Consensus 166 ------~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~--------------------------- 212 (250)
T 1yo6_A 166 ------QFPVLAYRMSKAAINMFGRTLAVDLKDDNVLVVNFCPGWVQTNLGGK--------------------------- 212 (250)
T ss_dssp ------SSCBHHHHHHHHHHHHHHHHHHHHTGGGTCEEEEEECCCC----------------------------------
T ss_pred ------cCCccHHHHHHHHHHHHHHHHHHHhccCCeEEEEEcCCceecCCCCC---------------------------
Confidence 023457999999999998765 347999999999886653210
Q ss_pred cCCCceeeeeeHHHHHHHHHHHHHHhccCCCCCcEEEecC
Q 010075 294 GETKVIMDVIPVDMVVNAMIVAMVAHAKQPSDANIYHVGS 333 (519)
Q Consensus 294 ~~~~~~~d~vpVDdva~aii~a~~~~~~~~~~~~iyni~s 333 (519)
..+++.+++|++++.++...... ..+..+.+.+
T Consensus 213 ------~~~~~~~~~a~~~~~~~~~~~~~-~~G~~~~~~g 245 (250)
T 1yo6_A 213 ------NAALTVEQSTAELISSFNKLDNS-HNGRFFMRNL 245 (250)
T ss_dssp ------------HHHHHHHHHHHTTCCGG-GTTCEEETTE
T ss_pred ------CCCCCHHHHHHHHHHHHhccccc-CCCeEEEECC
Confidence 13578999999999998643211 1245555543
|
| >3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition, oxidoreductase; HET: NAD; 2.00A {Brevibacterium saccharolyticum} | Back alignment and structure |
|---|
Probab=99.76 E-value=4.8e-17 Score=159.05 Aligned_cols=226 Identities=14% Similarity=0.127 Sum_probs=149.5
Q ss_pred CCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEEe
Q 010075 12 NKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVP 91 (519)
Q Consensus 12 ~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v~ 91 (519)
+|+++||||||+||++++++|++.| .+|+++.|+..... .+.+.++ +++ ...++.++.
T Consensus 2 ~k~vlVTGas~gIG~~ia~~l~~~G---~~V~~~~r~~~~~~-~~~~~~~---------~~~---------~~~~~~~~~ 59 (258)
T 3a28_C 2 SKVAMVTGGAQGIGRGISEKLAADG---FDIAVADLPQQEEQ-AAETIKL---------IEA---------ADQKAVFVG 59 (258)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHHT---CEEEEEECGGGHHH-HHHHHHH---------HHT---------TTCCEEEEE
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCC---CEEEEEeCCcchHH-HHHHHHH---------HHh---------cCCcEEEEE
Confidence 7899999999999999999999998 67889888753210 1121111 111 025688999
Q ss_pred ccCCCCCCCCChhhhHHHHh-------cCccEEEEcCccCCc-------cccHHHHHHHhHHHHHHHHHHHHhc---cCC
Q 010075 92 GDISSEDLGLKDSNLKEELW-------NELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKC---VKL 154 (519)
Q Consensus 92 gDl~~~~lgls~~~~~~~l~-------~~vdiViH~Aa~v~f-------~~~~~~~~~~Nv~gt~~ll~~a~~~---~~l 154 (519)
+|++++ +..+.++ .++|++||+||.... .+.++..+++|+.|+.++++.+.+. .+.
T Consensus 60 ~Dv~~~-------~~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~ 132 (258)
T 3a28_C 60 LDVTDK-------ANFDSAIDEAAEKLGGFDVLVNNAGIAQIKPLLEVTEEDLKQIYSVNVFSVFFGIQAASRKFDELGV 132 (258)
T ss_dssp CCTTCH-------HHHHHHHHHHHHHHTCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTC
T ss_pred ccCCCH-------HHHHHHHHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCC
Confidence 999963 2223333 379999999997543 2467888999999999999887652 245
Q ss_pred -ceEEEEecceeecCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcHHHH
Q 010075 155 -KVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVF 233 (519)
Q Consensus 155 -~~~V~vSTa~v~~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~Y~~ 233 (519)
.++|++||...+... .....|+.
T Consensus 133 ~g~iv~isS~~~~~~~--------------------------------------------------------~~~~~Y~~ 156 (258)
T 3a28_C 133 KGKIINAASIAAIQGF--------------------------------------------------------PILSAYST 156 (258)
T ss_dssp CCEEEEECCGGGTSCC--------------------------------------------------------TTCHHHHH
T ss_pred CcEEEEECcchhccCC--------------------------------------------------------CCchhHHH
Confidence 799999998654211 12357999
Q ss_pred HHHHHHHHHHHh-----hcCCcEEEEecCccccCCCCCCCcccccc---ccc--HHHHHHhhcCCceeeccCCCceeeee
Q 010075 234 TKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDL---KTI--NTLFVASAQGNLRCLVGETKVIMDVI 303 (519)
Q Consensus 234 sK~~aE~lv~~~-----~~~lp~~IvRPs~V~g~~~~p~~gw~~~~---~~~--~~~i~~~~~g~~~~~~~~~~~~~d~v 303 (519)
||+..|.+.+.. ..++.+.+++||.|.++.... +.... .+. .......... .....+.
T Consensus 157 sK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~---~~~~~~~~~~~~~~~~~~~~~~~---------~p~~r~~ 224 (258)
T 3a28_C 157 TKFAVRGLTQAAAQELAPKGHTVNAYAPGIVGTGMWEQ---IDAELSKINGKPIGENFKEYSSS---------IALGRPS 224 (258)
T ss_dssp HHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSHHHHH---HHHHHHHHHCCCTTHHHHHHHTT---------CTTSSCB
T ss_pred HHHHHHHHHHHHHHHHHhhCeEEEEEECCccCChhhhh---hhhhhccccCCchHHHHHHHHhc---------CCCCCcc
Confidence 999999888764 358999999999987653210 00000 000 0111111111 1122468
Q ss_pred eHHHHHHHHHHHHHHhccCCCCCcEEEecCCC
Q 010075 304 PVDMVVNAMIVAMVAHAKQPSDANIYHVGSSL 335 (519)
Q Consensus 304 pVDdva~aii~a~~~~~~~~~~~~iyni~s~~ 335 (519)
..+|+|++++.++..... .-.++++++.+|.
T Consensus 225 ~p~dvA~~v~~l~s~~~~-~~tG~~i~vdGG~ 255 (258)
T 3a28_C 225 VPEDVAGLVSFLASENSN-YVTGQVMLVDGGM 255 (258)
T ss_dssp CHHHHHHHHHHHHSGGGT-TCCSCEEEESSSS
T ss_pred CHHHHHHHHHHHhCcccC-CCCCCEEEECCCE
Confidence 899999999998864322 2236899998873
|
| >1ooe_A Dihydropteridine reductase; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics; HET: MES; 1.65A {Caenorhabditis elegans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.76 E-value=1.8e-17 Score=159.81 Aligned_cols=203 Identities=11% Similarity=0.104 Sum_probs=142.9
Q ss_pred cCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 010075 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (519)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (519)
|++|+|+||||||+||++++++|++.| .+|+++.|+.... .....+
T Consensus 1 m~~k~vlITGas~gIG~~~a~~l~~~G---~~V~~~~r~~~~~-------------------------------~~~~~~ 46 (236)
T 1ooe_A 1 MSSGKVIVYGGKGALGSAILEFFKKNG---YTVLNIDLSANDQ-------------------------------ADSNIL 46 (236)
T ss_dssp -CCEEEEEETTTSHHHHHHHHHHHHTT---EEEEEEESSCCTT-------------------------------SSEEEE
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCC---CEEEEEecCcccc-------------------------------ccccEE
Confidence 368999999999999999999999998 6889999976432 123567
Q ss_pred EeccCCCCCCCCChhhhHHHHh---------cCccEEEEcCccCC---c-----cccHHHHHHHhHHHHHHHHHHHHhc-
Q 010075 90 VPGDISSEDLGLKDSNLKEELW---------NELDIMVNSAAITK---F-----DERYDVAFGINTLGVIHLVNFAKKC- 151 (519)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~---------~~vdiViH~Aa~v~---f-----~~~~~~~~~~Nv~gt~~ll~~a~~~- 151 (519)
+.+|+++ .+..+.+. .++|+|||+||... + .+.++..+++|+.|+.++++.+.+.
T Consensus 47 ~~~D~~~-------~~~~~~~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~ 119 (236)
T 1ooe_A 47 VDGNKNW-------TEQEQSILEQTASSLQGSQVDGVFCVAGGWAGGSASSKDFVKNADLMIKQSVWSSAIAAKLATTHL 119 (236)
T ss_dssp CCTTSCH-------HHHHHHHHHHHHHHHTTCCEEEEEECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHE
T ss_pred EeCCCCC-------HHHHHHHHHHHHHHhCCCCCCEEEECCcccCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHh
Confidence 8899994 33333333 37999999999643 1 2456788999999999999988753
Q ss_pred cCCceEEEEecceeecCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcHH
Q 010075 152 VKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTY 231 (519)
Q Consensus 152 ~~l~~~V~vSTa~v~~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~Y 231 (519)
.+-.++|++||...+... .....|
T Consensus 120 ~~~g~iv~isS~~~~~~~--------------------------------------------------------~~~~~Y 143 (236)
T 1ooe_A 120 KPGGLLQLTGAAAAMGPT--------------------------------------------------------PSMIGY 143 (236)
T ss_dssp EEEEEEEEECCGGGGSCC--------------------------------------------------------TTBHHH
T ss_pred ccCCEEEEECchhhccCC--------------------------------------------------------CCcHHH
Confidence 223589999998654211 223579
Q ss_pred HHHHHHHHHHHHHh----h---cCCcEEEEecCccccCCCCCCCcccccccccHHHHHHhhcCCceeeccCCCceeeeee
Q 010075 232 VFTKTMGEMLMQQS----K---ENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIP 304 (519)
Q Consensus 232 ~~sK~~aE~lv~~~----~---~~lp~~IvRPs~V~g~~~~p~~gw~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~d~vp 304 (519)
+.||+..+.+.+.+ . .++.+.+++||.|.++... ..... .....++|
T Consensus 144 ~~sK~a~~~~~~~la~e~~~~~~gi~v~~v~Pg~v~t~~~~-----------------~~~~~---------~~~~~~~~ 197 (236)
T 1ooe_A 144 GMAKAAVHHLTSSLAAKDSGLPDNSAVLTIMPVTLDTPMNR-----------------KWMPN---------ADHSSWTP 197 (236)
T ss_dssp HHHHHHHHHHHHHHHSTTSSCCTTCEEEEEEESCBCCHHHH-----------------HHSTT---------CCGGGCBC
T ss_pred HHHHHHHHHHHHHHHHHhcccCCCeEEEEEecCcccCcchh-----------------hcCCC---------ccccccCC
Confidence 99999999998865 1 2599999999988765321 00000 01123578
Q ss_pred HHHHHHHHHHHHHHhccCCCCCcEEEecCCC
Q 010075 305 VDMVVNAMIVAMVAHAKQPSDANIYHVGSSL 335 (519)
Q Consensus 305 VDdva~aii~a~~~~~~~~~~~~iyni~s~~ 335 (519)
.+|+|++++..+.......-.++++++.++.
T Consensus 198 ~~dvA~~i~~~l~s~~~~~~~G~~~~v~gg~ 228 (236)
T 1ooe_A 198 LSFISEHLLKWTTETSSRPSSGALLKITTEN 228 (236)
T ss_dssp HHHHHHHHHHHHHCGGGCCCTTCEEEEEEET
T ss_pred HHHHHHHHHHHHcCCCcccccccEEEEecCC
Confidence 8999999986664333332346788887653
|
| >3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A* | Back alignment and structure |
|---|
Probab=99.76 E-value=2.2e-17 Score=161.72 Aligned_cols=222 Identities=18% Similarity=0.182 Sum_probs=150.2
Q ss_pred CCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEE-EecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 010075 11 ENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLF-VRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (519)
Q Consensus 11 ~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~L-vR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (519)
+||+|+||||+|+||++++++|++.| .+|+++ .|+.. ..+.+.+++ ++ ...++.+
T Consensus 3 ~~k~vlVTGas~gIG~aia~~l~~~G---~~vv~~~~r~~~---~~~~~~~~~---------~~---------~~~~~~~ 58 (258)
T 3oid_A 3 QNKCALVTGSSRGVGKAAAIRLAENG---YNIVINYARSKK---AALETAEEI---------EK---------LGVKVLV 58 (258)
T ss_dssp CCCEEEESSCSSHHHHHHHHHHHHTT---CEEEEEESSCHH---HHHHHHHHH---------HT---------TTCCEEE
T ss_pred CCCEEEEecCCchHHHHHHHHHHHCC---CEEEEEcCCCHH---HHHHHHHHH---------Hh---------cCCcEEE
Confidence 68999999999999999999999998 567775 55432 122222111 11 1257899
Q ss_pred EeccCCCCCCCCChhhhHHHHh-------cCccEEEEcCccCCc-------cccHHHHHHHhHHHHHHHHHHHHhc---c
Q 010075 90 VPGDISSEDLGLKDSNLKEELW-------NELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKC---V 152 (519)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~-------~~vdiViH~Aa~v~f-------~~~~~~~~~~Nv~gt~~ll~~a~~~---~ 152 (519)
+.+|++++ +..+.++ .++|++||+||.... .+.++..+++|+.|+.++++.+.+. .
T Consensus 59 ~~~Dv~~~-------~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~ 131 (258)
T 3oid_A 59 VKANVGQP-------AKIKEMFQQIDETFGRLDVFVNNAASGVLRPVMELEETHWDWTMNINAKALLFCAQEAAKLMEKN 131 (258)
T ss_dssp EECCTTCH-------HHHHHHHHHHHHHHSCCCEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTT
T ss_pred EEcCCCCH-------HHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc
Confidence 99999963 2223333 468999999996432 2457788999999999999887432 2
Q ss_pred CCceEEEEecceeecCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcHHH
Q 010075 153 KLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYV 232 (519)
Q Consensus 153 ~l~~~V~vSTa~v~~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~Y~ 232 (519)
+..++|++||...+... .....|+
T Consensus 132 ~~g~iv~isS~~~~~~~--------------------------------------------------------~~~~~Y~ 155 (258)
T 3oid_A 132 GGGHIVSISSLGSIRYL--------------------------------------------------------ENYTTVG 155 (258)
T ss_dssp TCEEEEEEEEGGGTSBC--------------------------------------------------------TTCHHHH
T ss_pred CCcEEEEECchhhCCCC--------------------------------------------------------CCcHHHH
Confidence 45799999997654211 2346799
Q ss_pred HHHHHHHHHHHHh-----hcCCcEEEEecCccccCCCCCCCcccccccccHHHHHHhhcCCceeeccCCCceeeeeeHHH
Q 010075 233 FTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDM 307 (519)
Q Consensus 233 ~sK~~aE~lv~~~-----~~~lp~~IvRPs~V~g~~~~p~~gw~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~d~vpVDd 307 (519)
.||+..+.+.+.+ ..++++..++||.|.++.....+. ..........+ .....+..++|
T Consensus 156 asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~-------~~~~~~~~~~~---------~p~~r~~~~~d 219 (258)
T 3oid_A 156 VSKAALEALTRYLAVELSPKQIIVNAVSGGAIDTDALKHFPN-------REDLLEDARQN---------TPAGRMVEIKD 219 (258)
T ss_dssp HHHHHHHHHHHHHHHHTGGGTEEEEEEEECCBCSGGGGGCTT-------HHHHHHHHHHH---------CTTSSCBCHHH
T ss_pred HHHHHHHHHHHHHHHHHhhcCcEEEEEeeCCCcChhhhhccc-------CHHHHHHHHhc---------CCCCCCcCHHH
Confidence 9999999988765 347999999999998765422211 11112211111 11234678999
Q ss_pred HHHHHHHHHHHhccCCCCCcEEEecCCCC
Q 010075 308 VVNAMIVAMVAHAKQPSDANIYHVGSSLR 336 (519)
Q Consensus 308 va~aii~a~~~~~~~~~~~~iyni~s~~~ 336 (519)
+|++++.++.... ..-.++++++.+|..
T Consensus 220 va~~v~~L~s~~~-~~itG~~i~vdGG~~ 247 (258)
T 3oid_A 220 MVDTVEFLVSSKA-DMIRGQTIIVDGGRS 247 (258)
T ss_dssp HHHHHHHHTSSTT-TTCCSCEEEESTTGG
T ss_pred HHHHHHHHhCccc-CCccCCEEEECCCcc
Confidence 9999998886332 222478999988843
|
| >1uzm_A 3-oxoacyl-[acyl-carrier protein] reductase; beta-ketoacyl reductase, oxidoreductase; 1.49A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1uzn_A* 2ntn_A 1uzl_A | Back alignment and structure |
|---|
Probab=99.76 E-value=2.4e-17 Score=160.28 Aligned_cols=209 Identities=12% Similarity=0.159 Sum_probs=144.3
Q ss_pred cCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 010075 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (519)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (519)
+++|+|+||||+|+||++++++|++.| .+|+++.|+.... +.+..
T Consensus 13 l~~k~vlVTGas~gIG~~ia~~l~~~G---~~V~~~~r~~~~~--------------------------------~~~~~ 57 (247)
T 1uzm_A 13 FVSRSVLVTGGNRGIGLAIAQRLAADG---HKVAVTHRGSGAP--------------------------------KGLFG 57 (247)
T ss_dssp CCCCEEEETTTTSHHHHHHHHHHHHTT---CEEEEEESSSCCC--------------------------------TTSEE
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCC---CEEEEEeCChHHH--------------------------------HHhcC
Confidence 678999999999999999999999998 6889999875321 12224
Q ss_pred EeccCCCCCCCCChhhhHHHHh-------cCccEEEEcCccCCc-------cccHHHHHHHhHHHHHHHHHHHHhc---c
Q 010075 90 VPGDISSEDLGLKDSNLKEELW-------NELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKC---V 152 (519)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~-------~~vdiViH~Aa~v~f-------~~~~~~~~~~Nv~gt~~ll~~a~~~---~ 152 (519)
+.+|++++ +..+.++ .++|++||+||.... .+.++..+++|+.|+.++++.+.+. .
T Consensus 58 ~~~D~~~~-------~~~~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~ 130 (247)
T 1uzm_A 58 VEVDVTDS-------DAVDRAFTAVEEHQGPVEVLVSNAGLSADAFLMRMTEEKFEKVINANLTGAFRVAQRASRSMQRN 130 (247)
T ss_dssp EECCTTCH-------HHHHHHHHHHHHHHSSCSEEEEECSCCC-----CCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHT
T ss_pred eeccCCCH-------HHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhC
Confidence 78999953 2222333 368999999997542 2567888999999999999887542 3
Q ss_pred CCceEEEEecceeecCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcHHH
Q 010075 153 KLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYV 232 (519)
Q Consensus 153 ~l~~~V~vSTa~v~~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~Y~ 232 (519)
+..++|++||....... .....|+
T Consensus 131 ~~g~iv~isS~~~~~~~--------------------------------------------------------~~~~~Y~ 154 (247)
T 1uzm_A 131 KFGRMIFIGSVSGLWGI--------------------------------------------------------GNQANYA 154 (247)
T ss_dssp TCEEEEEECCCCC-------------------------------------------------------------CCHHHH
T ss_pred CCCEEEEECCHhhccCC--------------------------------------------------------CCChhHH
Confidence 56899999997543211 1235799
Q ss_pred HHHHHHHHHHHHh-----hcCCcEEEEecCccccCCCCCCCcccccccccHHHHHHhhcCCceeeccCCCceeeeeeHHH
Q 010075 233 FTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDM 307 (519)
Q Consensus 233 ~sK~~aE~lv~~~-----~~~lp~~IvRPs~V~g~~~~p~~gw~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~d~vpVDd 307 (519)
.||+..+.+.+.. ..++++.+++||.|.++..... ........... . ....+++++|
T Consensus 155 ~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~---------~~~~~~~~~~~----~-----p~~~~~~~~d 216 (247)
T 1uzm_A 155 ASKAGVIGMARSIARELSKANVTANVVAPGYIDTDMTRAL---------DERIQQGALQF----I-----PAKRVGTPAE 216 (247)
T ss_dssp HHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHS---------CHHHHHHHGGG----C-----TTCSCBCHHH
T ss_pred HHHHHHHHHHHHHHHHhhhcCcEEEEEEeCCCcccchhhc---------CHHHHHHHHhc----C-----CCCCCcCHHH
Confidence 9999888887754 3589999999999876432110 01111111110 0 1124789999
Q ss_pred HHHHHHHHHHHhccCCCCCcEEEecCCC
Q 010075 308 VVNAMIVAMVAHAKQPSDANIYHVGSSL 335 (519)
Q Consensus 308 va~aii~a~~~~~~~~~~~~iyni~s~~ 335 (519)
+|++++.++.... ..-.++++++.+|.
T Consensus 217 vA~~~~~l~s~~~-~~~~G~~i~vdgG~ 243 (247)
T 1uzm_A 217 VAGVVSFLASEDA-SYISGAVIPVDGGM 243 (247)
T ss_dssp HHHHHHHHHSGGG-TTCCSCEEEESTTT
T ss_pred HHHHHHHHcCccc-cCCcCCEEEECCCc
Confidence 9999999886432 22247899998874
|
| >3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str} | Back alignment and structure |
|---|
Probab=99.75 E-value=6.4e-17 Score=158.39 Aligned_cols=223 Identities=13% Similarity=0.122 Sum_probs=146.0
Q ss_pred cCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 010075 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (519)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (519)
++||+++||||+|+||++++++|++.| .+|+++.|..... .+...+++ ++ ...++.+
T Consensus 6 l~~k~vlVTGas~GIG~aia~~la~~G---~~V~~~~~~~~~~--~~~~~~~~---------~~---------~~~~~~~ 62 (259)
T 3edm_A 6 FTNRTIVVAGAGRDIGRACAIRFAQEG---ANVVLTYNGAAEG--AATAVAEI---------EK---------LGRSALA 62 (259)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHTT---CEEEEEECSSCHH--HHHHHHHH---------HT---------TTSCCEE
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCC---CEEEEEcCCCHHH--HHHHHHHH---------Hh---------cCCceEE
Confidence 578999999999999999999999998 5777775544321 12211111 11 1257889
Q ss_pred EeccCCCCCCCCChhhhHHHHh-------cCccEEEEcCccCC----c----cccHHHHHHHhHHHHHHHHHHHHhc-cC
Q 010075 90 VPGDISSEDLGLKDSNLKEELW-------NELDIMVNSAAITK----F----DERYDVAFGINTLGVIHLVNFAKKC-VK 153 (519)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~-------~~vdiViH~Aa~v~----f----~~~~~~~~~~Nv~gt~~ll~~a~~~-~~ 153 (519)
+.+|++++ +..+.++ .++|++||+||... + .+.++..+++|+.|+.++++.+... .+
T Consensus 63 ~~~Dv~~~-------~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~ 135 (259)
T 3edm_A 63 IKADLTNA-------AEVEAAISAAADKFGEIHGLVHVAGGLIARKTIAEMDEAFWHQVLDVNLTSLFLTAKTALPKMAK 135 (259)
T ss_dssp EECCTTCH-------HHHHHHHHHHHHHHCSEEEEEECCCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHGGGEEE
T ss_pred EEcCCCCH-------HHHHHHHHHHHHHhCCCCEEEECCCccCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 99999963 3233433 37999999998651 1 2457888999999999999998763 22
Q ss_pred CceEEEEecceee-cCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcHHH
Q 010075 154 LKVFVHVSTAYVA-GERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYV 232 (519)
Q Consensus 154 l~~~V~vSTa~v~-~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~Y~ 232 (519)
-.++|++||...+ ... .....|+
T Consensus 136 ~g~iv~isS~~~~~~~~--------------------------------------------------------~~~~~Y~ 159 (259)
T 3edm_A 136 GGAIVTFSSQAGRDGGG--------------------------------------------------------PGALAYA 159 (259)
T ss_dssp EEEEEEECCHHHHHCCS--------------------------------------------------------TTCHHHH
T ss_pred CCEEEEEcCHHhccCCC--------------------------------------------------------CCcHHHH
Confidence 3489999998654 111 2235799
Q ss_pred HHHHHHHHHHHHh----hcCCcEEEEecCccccCCCCCCCcccccccccHHHHHHhhcCCceeeccCCCceeeeeeHHHH
Q 010075 233 FTKTMGEMLMQQS----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMV 308 (519)
Q Consensus 233 ~sK~~aE~lv~~~----~~~lp~~IvRPs~V~g~~~~p~~gw~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~d~vpVDdv 308 (519)
.||+..+.+.+.. .+++.+..+.||.|.++....... ..... ..........+..++|+
T Consensus 160 asKaa~~~l~~~la~e~~~~I~vn~v~PG~v~T~~~~~~~~--------~~~~~---------~~~~~~p~~r~~~pedv 222 (259)
T 3edm_A 160 TSKGAVMTFTRGLAKEVGPKIRVNAVCPGMISTTFHDTFTK--------PEVRE---------RVAGATSLKREGSSEDV 222 (259)
T ss_dssp HHHHHHHHHHHHHHHHHTTTCEEEEEEECCBCC---------------------------------------CCBCHHHH
T ss_pred HHHHHHHHHHHHHHHHHCCCCEEEEEEECCCcCcccccccC--------hHHHH---------HHHhcCCCCCCcCHHHH
Confidence 9999999988754 345999999999997764422110 00000 01111223456789999
Q ss_pred HHHHHHHHHHhccCCCCCcEEEecCCCC
Q 010075 309 VNAMIVAMVAHAKQPSDANIYHVGSSLR 336 (519)
Q Consensus 309 a~aii~a~~~~~~~~~~~~iyni~s~~~ 336 (519)
|++++.++..... .-.++++++.+|..
T Consensus 223 a~~v~~L~s~~~~-~itG~~i~vdGg~~ 249 (259)
T 3edm_A 223 AGLVAFLASDDAA-YVTGACYDINGGVL 249 (259)
T ss_dssp HHHHHHHHSGGGT-TCCSCEEEESBCSS
T ss_pred HHHHHHHcCcccc-CccCCEEEECCCcC
Confidence 9999998864332 22478999988744
|
| >3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.75 E-value=1e-16 Score=158.47 Aligned_cols=234 Identities=12% Similarity=0.075 Sum_probs=152.5
Q ss_pred hhhcCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCC----------cccHHHHHHHHHhhhhhHHHHHhhhc
Q 010075 7 VEFLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAAD----------IDSAALRFQNEVLAKDVFNVLKEKWG 76 (519)
Q Consensus 7 ~~~~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~----------~~~~~~rl~~~~~~~~~f~~l~~~~~ 76 (519)
..-++||+++||||+|+||++++++|++.| .+|+++.|..+ .....++..+ .+..
T Consensus 6 ~~~l~~k~~lVTGas~GIG~a~a~~la~~G---~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~---------~~~~--- 70 (277)
T 3tsc_A 6 AGKLEGRVAFITGAARGQGRAHAVRMAAEG---ADIIAVDIAGKLPSCVPYDPASPDDLSETVR---------LVEA--- 70 (277)
T ss_dssp -CTTTTCEEEEESTTSHHHHHHHHHHHHTT---CEEEEEECCSCCCTTCCSCCCCHHHHHHHHH---------HHHH---
T ss_pred ccccCCCEEEEECCccHHHHHHHHHHHHcC---CEEEEEeccccccccccccccCHHHHHHHHH---------HHHh---
Confidence 344789999999999999999999999999 67888888532 1111222111 1111
Q ss_pred cccccccCCceEEEeccCCCCCCCCChhhhHHHHh-------cCccEEEEcCccCCc-------cccHHHHHHHhHHHHH
Q 010075 77 TRLNSFISEKITFVPGDISSEDLGLKDSNLKEELW-------NELDIMVNSAAITKF-------DERYDVAFGINTLGVI 142 (519)
Q Consensus 77 ~~~~~~~~~~v~~v~gDl~~~~lgls~~~~~~~l~-------~~vdiViH~Aa~v~f-------~~~~~~~~~~Nv~gt~ 142 (519)
...++.++.+|++++ +..+.++ .++|++||+||.... .+.++..+++|+.|+.
T Consensus 71 ------~~~~~~~~~~D~~~~-------~~v~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~ 137 (277)
T 3tsc_A 71 ------ANRRIVAAVVDTRDF-------DRLRKVVDDGVAALGRLDIIVANAGVAAPQAWDDITPEDFRDVMDINVTGTW 137 (277)
T ss_dssp ------TTCCEEEEECCTTCH-------HHHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHH
T ss_pred ------cCCeEEEEECCCCCH-------HHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhHHHHH
Confidence 135789999999963 2223333 469999999998643 2567888999999999
Q ss_pred HHHHHHHhc----cCCceEEEEecceeecCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhcc
Q 010075 143 HLVNFAKKC----VKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLG 218 (519)
Q Consensus 143 ~ll~~a~~~----~~l~~~V~vSTa~v~~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg 218 (519)
++++.+... +.-.++|++||...+...
T Consensus 138 ~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~------------------------------------------------- 168 (277)
T 3tsc_A 138 NTVMAGAPRIIEGGRGGSIILISSAAGMKMQ------------------------------------------------- 168 (277)
T ss_dssp HHHHHHHHHHHHHTSCEEEEEECCGGGTSCC-------------------------------------------------
T ss_pred HHHHHHHHHHHhcCCCCEEEEEccHhhCCCC-------------------------------------------------
Confidence 998876542 124689999998654321
Q ss_pred ccccccCCCCcHHHHHHHHHHHHHHHh-----hcCCcEEEEecCccccCCCCCCCcccccccccHHHHHHhhcC-Cceee
Q 010075 219 TERAKLHGWPNTYVFTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQG-NLRCL 292 (519)
Q Consensus 219 ~~~~~~~~~~n~Y~~sK~~aE~lv~~~-----~~~lp~~IvRPs~V~g~~~~p~~gw~~~~~~~~~~i~~~~~g-~~~~~ 292 (519)
.....|+.||+..+.+.+.. ..++++..++||.|.++.... ............. .....
T Consensus 169 -------~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~--------~~~~~~~~~~~~~~~~~~~ 233 (277)
T 3tsc_A 169 -------PFMIHYTASKHAVTGLARAFAAELGKHSIRVNSVHPGPVNTPMGSG--------DMVTAVGQAMETNPQLSHV 233 (277)
T ss_dssp -------SSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSSGGGSH--------HHHHHHHHHHHTCGGGTTT
T ss_pred -------CCchhhHHHHHHHHHHHHHHHHHhCccCeEEEEEEeCCCcCCcccc--------hhhhhhhhcccccHHHHHH
Confidence 12357999999999888755 347999999999998764321 0000011100000 00001
Q ss_pred ccCCCceeeeeeHHHHHHHHHHHHHHhccCCCCCcEEEecCC
Q 010075 293 VGETKVIMDVIPVDMVVNAMIVAMVAHAKQPSDANIYHVGSS 334 (519)
Q Consensus 293 ~~~~~~~~d~vpVDdva~aii~a~~~~~~~~~~~~iyni~s~ 334 (519)
....... .+...+|+|++++.++..... .-.++++++.+|
T Consensus 234 ~~~~~p~-r~~~pedvA~~v~~L~s~~~~-~itG~~i~vdGG 273 (277)
T 3tsc_A 234 LTPFLPD-WVAEPEDIADTVCWLASDESR-KVTAAQIPVDQG 273 (277)
T ss_dssp TCCSSSC-SCBCHHHHHHHHHHHHSGGGT-TCCSCEEEESTT
T ss_pred hhhccCC-CCCCHHHHHHHHHHHhCcccc-CCcCCEEeeCCC
Confidence 1111111 378899999999998864332 224789999887
|
| >1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.75 E-value=2.5e-17 Score=161.89 Aligned_cols=231 Identities=14% Similarity=0.064 Sum_probs=149.4
Q ss_pred cCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 010075 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (519)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (519)
++||+|+||||+|+||+++++.|++.| .+|+++.|+... .+.+.+ .+.+..+ ..++.+
T Consensus 11 l~~k~vlVTGas~gIG~~ia~~l~~~G---~~V~~~~r~~~~---~~~~~~---------~~~~~~~-------~~~~~~ 68 (267)
T 1iy8_A 11 FTDRVVLITGGGSGLGRATAVRLAAEG---AKLSLVDVSSEG---LEASKA---------AVLETAP-------DAEVLT 68 (267)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTT---CEEEEEESCHHH---HHHHHH---------HHHHHCT-------TCCEEE
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCC---CEEEEEeCCHHH---HHHHHH---------HHHhhcC-------CceEEE
Confidence 689999999999999999999999998 678999886421 122211 1111110 256889
Q ss_pred EeccCCCCCCCCChhhhHHHHh-------cCccEEEEcCccCCc--------cccHHHHHHHhHHHHHHHHHHHHhc---
Q 010075 90 VPGDISSEDLGLKDSNLKEELW-------NELDIMVNSAAITKF--------DERYDVAFGINTLGVIHLVNFAKKC--- 151 (519)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~-------~~vdiViH~Aa~v~f--------~~~~~~~~~~Nv~gt~~ll~~a~~~--- 151 (519)
+.+|++++ +..+.++ .++|+|||+||.... .+.++..+++|+.|+..+.+.+.+.
T Consensus 69 ~~~D~~~~-------~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~ 141 (267)
T 1iy8_A 69 TVADVSDE-------AQVEAYVTATTERFGRIDGFFNNAGIEGKQNPTESFTAAEFDKVVSINLRGVFLGLEKVLKIMRE 141 (267)
T ss_dssp EECCTTSH-------HHHHHHHHHHHHHHSCCSEEEECCCCCCCCBCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHH
T ss_pred EEccCCCH-------HHHHHHHHHHHHHcCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHH
Confidence 99999953 3233333 379999999997543 2467888999999988776655321
Q ss_pred cCCceEEEEecceeecCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcHH
Q 010075 152 VKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTY 231 (519)
Q Consensus 152 ~~l~~~V~vSTa~v~~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~Y 231 (519)
.+..++|++||...+... .....|
T Consensus 142 ~~~g~iv~isS~~~~~~~--------------------------------------------------------~~~~~Y 165 (267)
T 1iy8_A 142 QGSGMVVNTASVGGIRGI--------------------------------------------------------GNQSGY 165 (267)
T ss_dssp HTCCEEEEECCGGGTSBC--------------------------------------------------------SSBHHH
T ss_pred cCCCEEEEEcchhhccCC--------------------------------------------------------CCCccH
Confidence 256799999998654211 224579
Q ss_pred HHHHHHHHHHHHHh-----hcCCcEEEEecCccccCCCCCCCcccccccccHHHHHHhhcCCceeeccCCCceeeeeeHH
Q 010075 232 VFTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVD 306 (519)
Q Consensus 232 ~~sK~~aE~lv~~~-----~~~lp~~IvRPs~V~g~~~~p~~gw~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~d~vpVD 306 (519)
+.||+..+.+.+.. ..++++.+++||.|.++...... .................. .....+...+
T Consensus 166 ~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~-~~~~~~~~~~~~~~~~~~---------~p~~r~~~~~ 235 (267)
T 1iy8_A 166 AAAKHGVVGLTRNSAVEYGRYGIRINAIAPGAIWTPMVENSM-KQLDPENPRKAAEEFIQV---------NPSKRYGEAP 235 (267)
T ss_dssp HHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSHHHHHHH-HHHCTTCHHHHHHHHHTT---------CTTCSCBCHH
T ss_pred HHHHHHHHHHHHHHHHHHHhcCeEEEEEEeCCCcCcchhccc-cccChhhhhhHHHHHhcc---------CCCCCCcCHH
Confidence 99999999888754 35899999999999875321000 000000000000011111 1123468899
Q ss_pred HHHHHHHHHHHHhccCCCCCcEEEecCCCC
Q 010075 307 MVVNAMIVAMVAHAKQPSDANIYHVGSSLR 336 (519)
Q Consensus 307 dva~aii~a~~~~~~~~~~~~iyni~s~~~ 336 (519)
|+|++++.++..... .-.++++++.+|..
T Consensus 236 dvA~~v~~l~s~~~~-~~tG~~i~vdGG~~ 264 (267)
T 1iy8_A 236 EIAAVVAFLLSDDAS-YVNATVVPIDGGQS 264 (267)
T ss_dssp HHHHHHHHHTSGGGT-TCCSCEEEESTTTT
T ss_pred HHHHHHHHHcCcccc-CCCCCEEEECCCcc
Confidence 999999988854322 22368999988743
|
| >4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum} | Back alignment and structure |
|---|
Probab=99.75 E-value=7e-18 Score=166.50 Aligned_cols=223 Identities=14% Similarity=0.122 Sum_probs=151.4
Q ss_pred cCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 010075 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (519)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (519)
++||+++||||+|+||+++++.|++.| .+|+++.|+... .+++.+++ ++ ...++.+
T Consensus 24 l~gk~~lVTGas~gIG~aia~~la~~G---~~V~~~~r~~~~---~~~~~~~l---------~~---------~~~~~~~ 79 (271)
T 4ibo_A 24 LGGRTALVTGSSRGLGRAMAEGLAVAG---ARILINGTDPSR---VAQTVQEF---------RN---------VGHDAEA 79 (271)
T ss_dssp CTTCEEEETTCSSHHHHHHHHHHHHTT---CEEEECCSCHHH---HHHHHHHH---------HH---------TTCCEEE
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCC---CEEEEEeCCHHH---HHHHHHHH---------Hh---------cCCceEE
Confidence 689999999999999999999999998 678888775321 12222111 11 1257889
Q ss_pred EeccCCCCCCCCChhhhHHHHhc-------CccEEEEcCccCCc-------cccHHHHHHHhHHHHHHHHHHHHhc---c
Q 010075 90 VPGDISSEDLGLKDSNLKEELWN-------ELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKC---V 152 (519)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~~-------~vdiViH~Aa~v~f-------~~~~~~~~~~Nv~gt~~ll~~a~~~---~ 152 (519)
+.+|++++ +..+.+++ ++|++||+||.... .+.++..+++|+.|+.++++.+.+. .
T Consensus 80 ~~~Dv~d~-------~~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~ 152 (271)
T 4ibo_A 80 VAFDVTSE-------SEIIEAFARLDEQGIDVDILVNNAGIQFRKPMIELETADWQRVIDTNLTSAFMIGREAAKRMIPR 152 (271)
T ss_dssp CCCCTTCH-------HHHHHHHHHHHHHTCCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH
T ss_pred EEcCCCCH-------HHHHHHHHHHHHHCCCCCEEEECCCCCCCCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc
Confidence 99999953 32334433 79999999997532 2567888999999999998877542 2
Q ss_pred CCceEEEEecceeecCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcHHH
Q 010075 153 KLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYV 232 (519)
Q Consensus 153 ~l~~~V~vSTa~v~~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~Y~ 232 (519)
+..++|++||....... .....|+
T Consensus 153 ~~g~iV~isS~~~~~~~--------------------------------------------------------~~~~~Y~ 176 (271)
T 4ibo_A 153 GYGKIVNIGSLTSELAR--------------------------------------------------------ATVAPYT 176 (271)
T ss_dssp TCEEEEEECCGGGTSBC--------------------------------------------------------TTCHHHH
T ss_pred CCcEEEEEccHHhCCCC--------------------------------------------------------CCchhHH
Confidence 45689999997543211 2245799
Q ss_pred HHHHHHHHHHHHh-----hcCCcEEEEecCccccCCCCCCCcccccccccHHHHHHhhcCCceeeccCCCceeeeeeHHH
Q 010075 233 FTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDM 307 (519)
Q Consensus 233 ~sK~~aE~lv~~~-----~~~lp~~IvRPs~V~g~~~~p~~gw~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~d~vpVDd 307 (519)
.||+..+.+.+.. ..++++..++||.|.++..... .. ..........+ .....+..++|
T Consensus 177 asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~---~~----~~~~~~~~~~~---------~p~~r~~~ped 240 (271)
T 4ibo_A 177 VAKGGIKMLTRAMAAEWAQYGIQANAIGPGYMLTDMNQAL---ID----NPEFDAWVKAR---------TPAKRWGKPQE 240 (271)
T ss_dssp HHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHH---HH----CHHHHHHHHHH---------STTCSCBCGGG
T ss_pred HHHHHHHHHHHHHHHHHhhhCeEEEEEEeccEeCcchhhc---cc----CHHHHHHHHhc---------CCCCCCcCHHH
Confidence 9999999988765 3579999999999987643210 00 01111111111 11234567899
Q ss_pred HHHHHHHHHHHhccCCCCCcEEEecCCCC
Q 010075 308 VVNAMIVAMVAHAKQPSDANIYHVGSSLR 336 (519)
Q Consensus 308 va~aii~a~~~~~~~~~~~~iyni~s~~~ 336 (519)
+|++++.++.... ..-.++++++.+|..
T Consensus 241 va~~v~~L~s~~~-~~itG~~i~vdGG~~ 268 (271)
T 4ibo_A 241 LVGTAVFLSASAS-DYVNGQIIYVDGGML 268 (271)
T ss_dssp GHHHHHHHHSGGG-TTCCSCEEEESTTGG
T ss_pred HHHHHHHHhCccc-cCCCCcEEEECCCee
Confidence 9999998876433 222478999988843
|
| >3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A* | Back alignment and structure |
|---|
Probab=99.75 E-value=5.9e-17 Score=161.66 Aligned_cols=223 Identities=12% Similarity=0.116 Sum_probs=150.9
Q ss_pred hhcCCCEEEEeCCccH--HHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCC
Q 010075 8 EFLENKTILVSGVTGF--VAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISE 85 (519)
Q Consensus 8 ~~~~~k~VlITGaTGF--lG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~ 85 (519)
.-++||+|+||||+|+ ||+++++.|++.| .+|++..|+.... +.+. .+.++. .
T Consensus 27 ~~l~gk~~lVTGasg~~GIG~aia~~la~~G---~~V~~~~r~~~~~---~~~~----------~~~~~~---------~ 81 (293)
T 3grk_A 27 GLLQGKRGLILGVANNRSIAWGIAKAAREAG---AELAFTYQGDALK---KRVE----------PLAEEL---------G 81 (293)
T ss_dssp CTTTTCEEEEECCCSSSSHHHHHHHHHHHTT---CEEEEEECSHHHH---HHHH----------HHHHHH---------T
T ss_pred ccCCCCEEEEEcCCCCCcHHHHHHHHHHHCC---CEEEEEcCCHHHH---HHHH----------HHHHhc---------C
Confidence 3478999999999998 9999999999998 6788888873221 2221 111111 3
Q ss_pred ceEEEeccCCCCCCCCChhhhHHHHh-------cCccEEEEcCccCC-------c----cccHHHHHHHhHHHHHHHHHH
Q 010075 86 KITFVPGDISSEDLGLKDSNLKEELW-------NELDIMVNSAAITK-------F----DERYDVAFGINTLGVIHLVNF 147 (519)
Q Consensus 86 ~v~~v~gDl~~~~lgls~~~~~~~l~-------~~vdiViH~Aa~v~-------f----~~~~~~~~~~Nv~gt~~ll~~ 147 (519)
++.++.+|++++ +..+.++ .++|++||+||... + .+.++..+++|+.|+..+++.
T Consensus 82 ~~~~~~~Dv~d~-------~~v~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~ 154 (293)
T 3grk_A 82 AFVAGHCDVADA-------ASIDAVFETLEKKWGKLDFLVHAIGFSDKDELTGRYIDTSEANFTNTMLISVYSLTAVSRR 154 (293)
T ss_dssp CEEEEECCTTCH-------HHHHHHHHHHHHHTSCCSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHH
T ss_pred CceEEECCCCCH-------HHHHHHHHHHHHhcCCCCEEEECCccCCcccccccccccCHHHHHHHHHHHHHHHHHHHHH
Confidence 578999999963 3233333 37999999999764 1 256778899999999999998
Q ss_pred HHhc-cCCceEEEEecceeecCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCC
Q 010075 148 AKKC-VKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHG 226 (519)
Q Consensus 148 a~~~-~~l~~~V~vSTa~v~~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~ 226 (519)
+... .+-.++|++||...+... .
T Consensus 155 ~~~~m~~~g~Iv~isS~~~~~~~--------------------------------------------------------~ 178 (293)
T 3grk_A 155 AEKLMADGGSILTLTYYGAEKVM--------------------------------------------------------P 178 (293)
T ss_dssp HHHHTTTCEEEEEEECGGGTSBC--------------------------------------------------------T
T ss_pred HHHhccCCCEEEEEeehhhccCC--------------------------------------------------------C
Confidence 8653 344689999997654321 1
Q ss_pred CCcHHHHHHHHHHHHHHHh-----hcCCcEEEEecCccccCCCCCCCcccccccccHHHHHHhhcCCceeeccCCCceee
Q 010075 227 WPNTYVFTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMD 301 (519)
Q Consensus 227 ~~n~Y~~sK~~aE~lv~~~-----~~~lp~~IvRPs~V~g~~~~p~~gw~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~d 301 (519)
....|+.||+..+.+.+.. ..++.+..++||.|.++.....+. ............ ....
T Consensus 179 ~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~-------~~~~~~~~~~~~---------p~~r 242 (293)
T 3grk_A 179 NYNVMGVAKAALEASVKYLAVDLGPQNIRVNAISAGPIKTLAASGIGD-------FRYILKWNEYNA---------PLRR 242 (293)
T ss_dssp TTTHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCC------CC-------HHHHHHHHHHHS---------TTSS
T ss_pred chHHHHHHHHHHHHHHHHHHHHHhHhCCEEEEEecCCCcchhhhcccc-------hHHHHHHHHhcC---------CCCC
Confidence 2357999999999888765 357999999999998865432211 111111111111 1123
Q ss_pred eeeHHHHHHHHHHHHHHhccCCCCCcEEEecCCC
Q 010075 302 VIPVDMVVNAMIVAMVAHAKQPSDANIYHVGSSL 335 (519)
Q Consensus 302 ~vpVDdva~aii~a~~~~~~~~~~~~iyni~s~~ 335 (519)
+...+|+|++++.++..... .-.++++++.+|.
T Consensus 243 ~~~pedvA~~v~~L~s~~~~-~itG~~i~vdGG~ 275 (293)
T 3grk_A 243 TVTIDEVGDVGLYFLSDLSR-SVTGEVHHADSGY 275 (293)
T ss_dssp CCCHHHHHHHHHHHHSGGGT-TCCSCEEEESTTG
T ss_pred CCCHHHHHHHHHHHcCcccc-CCcceEEEECCCc
Confidence 56789999999998864332 2247899998873
|
| >3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber} | Back alignment and structure |
|---|
Probab=99.75 E-value=3.2e-17 Score=162.40 Aligned_cols=231 Identities=14% Similarity=0.109 Sum_probs=150.0
Q ss_pred hhcCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCce
Q 010075 8 EFLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKI 87 (519)
Q Consensus 8 ~~~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v 87 (519)
..+++|++|||||+|+||+++++.|++.| .+|+++.|+... .+.+.++ +++. ..++
T Consensus 20 ~m~~~k~~lVTGas~GIG~aia~~la~~G---~~V~~~~r~~~~---~~~~~~~---------l~~~---------~~~~ 75 (279)
T 3sju_A 20 HMSRPQTAFVTGVSSGIGLAVARTLAARG---IAVYGCARDAKN---VSAAVDG---------LRAA---------GHDV 75 (279)
T ss_dssp -----CEEEEESTTSHHHHHHHHHHHHTT---CEEEEEESCHHH---HHHHHHH---------HHTT---------TCCE
T ss_pred cccCCCEEEEeCCCCHHHHHHHHHHHHCC---CEEEEEeCCHHH---HHHHHHH---------HHhc---------CCcE
Confidence 44678999999999999999999999998 678888886422 1222111 1111 2578
Q ss_pred EEEeccCCCCCCCCChhhhHHHHh-------cCccEEEEcCccCCc-------cccHHHHHHHhHHHHHHHHHHHHh---
Q 010075 88 TFVPGDISSEDLGLKDSNLKEELW-------NELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKK--- 150 (519)
Q Consensus 88 ~~v~gDl~~~~lgls~~~~~~~l~-------~~vdiViH~Aa~v~f-------~~~~~~~~~~Nv~gt~~ll~~a~~--- 150 (519)
.++.+|++++ +..+.++ .++|++||+||.... .+.++..+++|+.|+.++++.+.+
T Consensus 76 ~~~~~Dv~d~-------~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~ 148 (279)
T 3sju_A 76 DGSSCDVTST-------DEVHAAVAAAVERFGPIGILVNSAGRNGGGETADLDDALWADVLDTNLTGVFRVTREVLRAGG 148 (279)
T ss_dssp EEEECCTTCH-------HHHHHHHHHHHHHHCSCCEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSS
T ss_pred EEEECCCCCH-------HHHHHHHHHHHHHcCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHhchhh
Confidence 9999999963 2222333 379999999997642 245778899999999999998765
Q ss_pred c--cCCceEEEEecceeecCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCC
Q 010075 151 C--VKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWP 228 (519)
Q Consensus 151 ~--~~l~~~V~vSTa~v~~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~ 228 (519)
+ .+..++|++||....... ...
T Consensus 149 ~~~~~~g~iV~isS~~~~~~~--------------------------------------------------------~~~ 172 (279)
T 3sju_A 149 MREAGWGRIVNIASTGGKQGV--------------------------------------------------------MYA 172 (279)
T ss_dssp HHHHTCEEEEEECCGGGTSCC--------------------------------------------------------TTC
T ss_pred HhhcCCcEEEEECChhhccCC--------------------------------------------------------CCC
Confidence 2 245799999997654211 224
Q ss_pred cHHHHHHHHHHHHHHHh-----hcCCcEEEEecCccccCCCCCCC-ccccccc-ccHHHHHHhhcCCceeeccCCCceee
Q 010075 229 NTYVFTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFP-GWVEDLK-TINTLFVASAQGNLRCLVGETKVIMD 301 (519)
Q Consensus 229 n~Y~~sK~~aE~lv~~~-----~~~lp~~IvRPs~V~g~~~~p~~-gw~~~~~-~~~~~i~~~~~g~~~~~~~~~~~~~d 301 (519)
..|+.||+..+.+.+.. ..++++..++||.|.++...... .+..... ........... ......
T Consensus 173 ~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~p~~r 243 (279)
T 3sju_A 173 APYTASKHGVVGFTKSVGFELAKTGITVNAVCPGYVETPMAERVREGYARHWGVTEQEVHERFNA---------KIPLGR 243 (279)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEESSBCSHHHHHHHHSCCSSSCCCHHHHHHHHHT---------TCTTSS
T ss_pred hhHHHHHHHHHHHHHHHHHHHHhhCcEEEEEeeCcccchHHHHHHhhhhhcccCChHHHHHHHHh---------cCCCCC
Confidence 57999999888887754 35799999999999775421100 0000000 01111222211 122335
Q ss_pred eeeHHHHHHHHHHHHHHhccCCCCCcEEEecCCC
Q 010075 302 VIPVDMVVNAMIVAMVAHAKQPSDANIYHVGSSL 335 (519)
Q Consensus 302 ~vpVDdva~aii~a~~~~~~~~~~~~iyni~s~~ 335 (519)
+..++|+|++++.++..... .-.++++++.+|.
T Consensus 244 ~~~pedvA~~v~~L~s~~a~-~itG~~i~vdGG~ 276 (279)
T 3sju_A 244 YSTPEEVAGLVGYLVTDAAA-SITAQALNVCGGL 276 (279)
T ss_dssp CBCHHHHHHHHHHHTSSGGG-GCCSCEEEESTTC
T ss_pred CCCHHHHHHHHHHHhCcccc-CcCCcEEEECCCc
Confidence 67899999999988764322 1237899998874
|
| >3ezl_A Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA reductase, oxidoreductase, structural genomics; HET: P4C; 2.25A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.75 E-value=2.1e-17 Score=161.28 Aligned_cols=224 Identities=9% Similarity=0.102 Sum_probs=147.4
Q ss_pred hhhcCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCc
Q 010075 7 VEFLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEK 86 (519)
Q Consensus 7 ~~~~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~ 86 (519)
+...++|+||||||+|+||++++++|++.| .+|+++.|..... . +...++ +++ ...+
T Consensus 8 ~~~~~~k~vlITGas~giG~~ia~~l~~~G---~~v~~~~~~~~~~-~-~~~~~~---------~~~---------~~~~ 64 (256)
T 3ezl_A 8 HMVMSQRIAYVTGGMGGIGTSICQRLHKDG---FRVVAGCGPNSPR-R-VKWLED---------QKA---------LGFD 64 (256)
T ss_dssp -----CEEEEETTTTSHHHHHHHHHHHHTT---EEEEEEECTTCSS-H-HHHHHH---------HHH---------TTCC
T ss_pred CCCCCCCEEEEECCCChHHHHHHHHHHHCC---CEEEEEeCCCHHH-H-HHHHHH---------HHh---------cCCe
Confidence 456789999999999999999999999998 6778777433222 1 111111 111 1257
Q ss_pred eEEEeccCCCCCCCCChhhhHHHHh-------cCccEEEEcCccCCc-------cccHHHHHHHhHHHHHHHHHHHHhc-
Q 010075 87 ITFVPGDISSEDLGLKDSNLKEELW-------NELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKC- 151 (519)
Q Consensus 87 v~~v~gDl~~~~lgls~~~~~~~l~-------~~vdiViH~Aa~v~f-------~~~~~~~~~~Nv~gt~~ll~~a~~~- 151 (519)
+.++.+|++++ +..+.++ .++|++||+||.... .+.++..+++|+.|+.++++.+...
T Consensus 65 ~~~~~~Dv~~~-------~~v~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~ 137 (256)
T 3ezl_A 65 FYASEGNVGDW-------DSTKQAFDKVKAEVGEIDVLVNNAGITRDVVFRKMTREDWQAVIDTNLTSLFNVTKQVIDGM 137 (256)
T ss_dssp CEEEECCTTCH-------HHHHHHHHHHHHHTCCEEEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHH
T ss_pred eEEEecCCCCH-------HHHHHHHHHHHHhcCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHH
Confidence 88999999953 2223333 379999999997642 2567888999999988887766331
Q ss_pred --cCCceEEEEecceeecCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCc
Q 010075 152 --VKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPN 229 (519)
Q Consensus 152 --~~l~~~V~vSTa~v~~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n 229 (519)
.+..++|++||....... ....
T Consensus 138 ~~~~~g~iv~isS~~~~~~~--------------------------------------------------------~~~~ 161 (256)
T 3ezl_A 138 VERGWGRIINISSVNGQKGQ--------------------------------------------------------FGQT 161 (256)
T ss_dssp HHHTCEEEEEECCCCGGGSC--------------------------------------------------------SCCH
T ss_pred HhcCCCEEEEEcchhhccCC--------------------------------------------------------CCCc
Confidence 255789999997544211 2245
Q ss_pred HHHHHHHHHHHHHHHh-----hcCCcEEEEecCccccCCCCCCCcccccccccHHHHHHhhcCCceeeccCCCceeeeee
Q 010075 230 TYVFTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIP 304 (519)
Q Consensus 230 ~Y~~sK~~aE~lv~~~-----~~~lp~~IvRPs~V~g~~~~p~~gw~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~d~vp 304 (519)
.|+.||+..+.+++.. ..++++..++||.|.++..... ............ ....+..
T Consensus 162 ~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~---------~~~~~~~~~~~~---------~~~~~~~ 223 (256)
T 3ezl_A 162 NYSTAKAGIHGFTMSLAQEVATKGVTVNTVSPGYIGTDMVKAI---------RPDVLEKIVATI---------PVRRLGS 223 (256)
T ss_dssp HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTS---------CHHHHHHHHHHS---------TTSSCBC
T ss_pred ccHHHHHHHHHHHHHHHHHHHHhCCEEEEEEECcccCcccccc---------CHHHHHHHHhcC---------CCCCCcC
Confidence 7999999888887654 3579999999999977543211 111222221111 1234678
Q ss_pred HHHHHHHHHHHHHHhccCCCCCcEEEecCCC
Q 010075 305 VDMVVNAMIVAMVAHAKQPSDANIYHVGSSL 335 (519)
Q Consensus 305 VDdva~aii~a~~~~~~~~~~~~iyni~s~~ 335 (519)
.+|+|++++.++.... ..-.++++++.+|.
T Consensus 224 ~~dva~~~~~l~s~~~-~~~tG~~i~vdgG~ 253 (256)
T 3ezl_A 224 PDEIGSIVAWLASEES-GFSTGADFSLNGGL 253 (256)
T ss_dssp HHHHHHHHHHHHSGGG-TTCCSCEEEESTTS
T ss_pred HHHHHHHHHHHhCCcc-cCCcCcEEEECCCE
Confidence 9999999998885432 22347899998874
|
| >3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} SCOP: c.2.1.0 PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A | Back alignment and structure |
|---|
Probab=99.75 E-value=4.1e-17 Score=159.08 Aligned_cols=225 Identities=13% Similarity=0.128 Sum_probs=151.5
Q ss_pred CCCcchhhhcCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccc
Q 010075 1 MELGSVVEFLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLN 80 (519)
Q Consensus 1 ~~~~~i~~~~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~ 80 (519)
|.+.+-...++||+|+||||+|+||+++++.|++.| .+|+++.|+... .+++.+ .+.+..
T Consensus 1 M~~~~~~~~l~~k~vlVTGas~gIG~aia~~l~~~G---~~V~~~~r~~~~---~~~~~~---------~~~~~~----- 60 (252)
T 3f1l_A 1 MHYQPKQDLLNDRIILVTGASDGIGREAAMTYARYG---ATVILLGRNEEK---LRQVAS---------HINEET----- 60 (252)
T ss_dssp CCCCCCTTTTTTCEEEEESTTSHHHHHHHHHHHHTT---CEEEEEESCHHH---HHHHHH---------HHHHHH-----
T ss_pred CCcCCcccccCCCEEEEeCCCChHHHHHHHHHHHCC---CEEEEEeCCHHH---HHHHHH---------HHHhhc-----
Confidence 566555677899999999999999999999999998 678898887422 122221 111111
Q ss_pred cccCCceEEEeccC--CCCCCCCChhhhHHHHh-------cCccEEEEcCccCC----c----cccHHHHHHHhHHHHHH
Q 010075 81 SFISEKITFVPGDI--SSEDLGLKDSNLKEELW-------NELDIMVNSAAITK----F----DERYDVAFGINTLGVIH 143 (519)
Q Consensus 81 ~~~~~~v~~v~gDl--~~~~lgls~~~~~~~l~-------~~vdiViH~Aa~v~----f----~~~~~~~~~~Nv~gt~~ 143 (519)
..++.++.+|+ ++ .+..+.+. .++|++||+||... + .+.++..+++|+.|+..
T Consensus 61 ---~~~~~~~~~D~~~~~-------~~~~~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~ 130 (252)
T 3f1l_A 61 ---GRQPQWFILDLLTCT-------SENCQQLAQRIAVNYPRLDGVLHNAGLLGDVCPMSEQNPQVWQDVMQVNVNATFM 130 (252)
T ss_dssp ---SCCCEEEECCTTTCC-------HHHHHHHHHHHHHHCSCCSEEEECCCCCCCCSCTTTCCHHHHHHHHHHHTHHHHH
T ss_pred ---CCCceEEEEecccCC-------HHHHHHHHHHHHHhCCCCCEEEECCccCCCCCCcccCCHHHHHHHHhhhhHHHHH
Confidence 24678999999 64 22222333 37999999999742 1 24577889999999999
Q ss_pred HHHHHHhc---cCCceEEEEecceeecCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhcccc
Q 010075 144 LVNFAKKC---VKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTE 220 (519)
Q Consensus 144 ll~~a~~~---~~l~~~V~vSTa~v~~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~ 220 (519)
+++.+... .+..++|++||...+...
T Consensus 131 ~~~~~~~~m~~~~~g~iv~isS~~~~~~~--------------------------------------------------- 159 (252)
T 3f1l_A 131 LTQALLPLLLKSDAGSLVFTSSSVGRQGR--------------------------------------------------- 159 (252)
T ss_dssp HHHHHHHHHHTSSSCEEEEECCGGGTSCC---------------------------------------------------
T ss_pred HHHHHHHHHHHCCCCEEEEECChhhccCC---------------------------------------------------
Confidence 99987431 356799999997643211
Q ss_pred ccccCCCCcHHHHHHHHHHHHHHHh----hcCCcEEEEecCccccCCCCCCCcccccccccHHHHHHhhcCCceeeccCC
Q 010075 221 RAKLHGWPNTYVFTKTMGEMLMQQS----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGET 296 (519)
Q Consensus 221 ~~~~~~~~n~Y~~sK~~aE~lv~~~----~~~lp~~IvRPs~V~g~~~~p~~gw~~~~~~~~~~i~~~~~g~~~~~~~~~ 296 (519)
.....|+.||+..+.+.+.. .+.+.+..+.||.|..+.. ......
T Consensus 160 -----~~~~~Y~asK~a~~~l~~~la~e~~~~irvn~v~PG~v~t~~~-----------------~~~~~~--------- 208 (252)
T 3f1l_A 160 -----ANWGAYAASKFATEGMMQVLADEYQQRLRVNCINPGGTRTAMR-----------------ASAFPT--------- 208 (252)
T ss_dssp -----TTCHHHHHHHHHHHHHHHHHHHHTTTTCEEEEEECCSBSSHHH-----------------HHHCTT---------
T ss_pred -----CCCchhHHHHHHHHHHHHHHHHHhcCCcEEEEEecCcccCchh-----------------hhhCCc---------
Confidence 22357999999999888765 3348899999988765321 000000
Q ss_pred CceeeeeeHHHHHHHHHHHHHHhccCCCCCcEEEecCCCCCc
Q 010075 297 KVIMDVIPVDMVVNAMIVAMVAHAKQPSDANIYHVGSSLRNP 338 (519)
Q Consensus 297 ~~~~d~vpVDdva~aii~a~~~~~~~~~~~~iyni~s~~~~~ 338 (519)
.....+...+|+|++++.++..... .-.++++++.+|...+
T Consensus 209 ~~~~~~~~p~dva~~~~~L~s~~~~-~itG~~i~vdgG~~~~ 249 (252)
T 3f1l_A 209 EDPQKLKTPADIMPLYLWLMGDDSR-RKTGMTFDAQPGRKPG 249 (252)
T ss_dssp CCGGGSBCTGGGHHHHHHHHSGGGT-TCCSCEEESSCC----
T ss_pred cchhccCCHHHHHHHHHHHcCcccc-CCCCCEEEeCCCcCCC
Confidence 0112356789999999998864332 2247899998886544
|
| >3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A* | Back alignment and structure |
|---|
Probab=99.75 E-value=8.6e-17 Score=157.82 Aligned_cols=224 Identities=13% Similarity=0.144 Sum_probs=153.7
Q ss_pred cCCCEEEEeCCccH--HHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCce
Q 010075 10 LENKTILVSGVTGF--VAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKI 87 (519)
Q Consensus 10 ~~~k~VlITGaTGF--lG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v 87 (519)
++||+|+||||+|+ ||++++++|++.| .+|+++.|+.+.....+++. ++.+ ..++
T Consensus 5 l~~k~vlVTGasg~~GIG~~ia~~l~~~G---~~V~~~~r~~~~~~~~~~~~-------------~~~~-------~~~~ 61 (266)
T 3oig_A 5 LEGRNIVVMGVANKRSIAWGIARSLHEAG---ARLIFTYAGERLEKSVHELA-------------GTLD-------RNDS 61 (266)
T ss_dssp CTTCEEEEECCCSTTSHHHHHHHHHHHTT---CEEEEEESSGGGHHHHHHHH-------------HTSS-------SCCC
T ss_pred cCCCEEEEEcCCCCCcHHHHHHHHHHHCC---CEEEEecCchHHHHHHHHHH-------------HhcC-------CCCc
Confidence 57899999999999 9999999999998 67888888753332222221 1111 2378
Q ss_pred EEEeccCCCCCCCCChhhhHHHHh-------cCccEEEEcCccCC-------c----cccHHHHHHHhHHHHHHHHHHHH
Q 010075 88 TFVPGDISSEDLGLKDSNLKEELW-------NELDIMVNSAAITK-------F----DERYDVAFGINTLGVIHLVNFAK 149 (519)
Q Consensus 88 ~~v~gDl~~~~lgls~~~~~~~l~-------~~vdiViH~Aa~v~-------f----~~~~~~~~~~Nv~gt~~ll~~a~ 149 (519)
.++.+|+++++ + .+.++ .++|++||+||... + .+.+...+++|+.|+.++++.+.
T Consensus 62 ~~~~~D~~~~~------~-v~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~ 134 (266)
T 3oig_A 62 IILPCDVTNDA------E-IETCFASIKEQVGVIHGIAHCIAFANKEELVGEYLNTNRDGFLLAHNISSYSLTAVVKAAR 134 (266)
T ss_dssp EEEECCCSSSH------H-HHHHHHHHHHHHSCCCEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHG
T ss_pred eEEeCCCCCHH------H-HHHHHHHHHHHhCCeeEEEEccccccccccccchhhccHHHHHHHHHHhHHHHHHHHHHHH
Confidence 99999999642 2 22332 37999999999754 1 24567789999999999999987
Q ss_pred hc-cCCceEEEEecceeecCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCC
Q 010075 150 KC-VKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWP 228 (519)
Q Consensus 150 ~~-~~l~~~V~vSTa~v~~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~ 228 (519)
.. .+-.++|++||...+... ...
T Consensus 135 ~~~~~~g~iv~isS~~~~~~~--------------------------------------------------------~~~ 158 (266)
T 3oig_A 135 PMMTEGGSIVTLTYLGGELVM--------------------------------------------------------PNY 158 (266)
T ss_dssp GGCTTCEEEEEEECGGGTSCC--------------------------------------------------------TTT
T ss_pred hhcCCCceEEEEecccccccC--------------------------------------------------------CCc
Confidence 64 234589999997654211 223
Q ss_pred cHHHHHHHHHHHHHHHh-----hcCCcEEEEecCccccCCCCCCCcccccccccHHHHHHhhcCCceeeccCCCceeeee
Q 010075 229 NTYVFTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVI 303 (519)
Q Consensus 229 n~Y~~sK~~aE~lv~~~-----~~~lp~~IvRPs~V~g~~~~p~~gw~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~d~v 303 (519)
..|+.||+..+.+.+.. ..++.+..++||.|.++.....+. ............ ....+.
T Consensus 159 ~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~-------~~~~~~~~~~~~---------~~~~~~ 222 (266)
T 3oig_A 159 NVMGVAKASLDASVKYLAADLGKENIRVNSISAGPIRTLSAKGISD-------FNSILKDIEERA---------PLRRTT 222 (266)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCSGGGTTCTT-------HHHHHHHHHHHS---------TTSSCC
T ss_pred chhHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcccccccccccc-------hHHHHHHHHhcC---------CCCCCC
Confidence 57999999999888754 347999999999998865432211 111122111111 112357
Q ss_pred eHHHHHHHHHHHHHHhccCCCCCcEEEecCCCC
Q 010075 304 PVDMVVNAMIVAMVAHAKQPSDANIYHVGSSLR 336 (519)
Q Consensus 304 pVDdva~aii~a~~~~~~~~~~~~iyni~s~~~ 336 (519)
..+|+|++++.++..... .-.++++++.+|-.
T Consensus 223 ~p~dva~~v~~l~s~~~~-~~tG~~i~vdGG~~ 254 (266)
T 3oig_A 223 TPEEVGDTAAFLFSDMSR-GITGENLHVDSGFH 254 (266)
T ss_dssp CHHHHHHHHHHHHSGGGT-TCCSCEEEESTTGG
T ss_pred CHHHHHHHHHHHcCCchh-cCcCCEEEECCCeE
Confidence 889999999998874332 22478999988743
|
| >3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.75 E-value=3.5e-17 Score=160.74 Aligned_cols=226 Identities=16% Similarity=0.160 Sum_probs=152.7
Q ss_pred hhhhcCCCEEEEeCCc--cHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccc
Q 010075 6 VVEFLENKTILVSGVT--GFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFI 83 (519)
Q Consensus 6 i~~~~~~k~VlITGaT--GFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~ 83 (519)
....+++|+|+||||+ |+||+++++.|++.| .+|+++.|+.+.....+.+. ++.
T Consensus 8 ~~~~~~~k~vlITGa~~~~giG~~ia~~l~~~G---~~V~~~~r~~~~~~~~~~~~-------------~~~-------- 63 (271)
T 3ek2_A 8 HMGFLDGKRILLTGLLSNRSIAYGIAKACKREG---AELAFTYVGDRFKDRITEFA-------------AEF-------- 63 (271)
T ss_dssp -CCTTTTCEEEECCCCSTTSHHHHHHHHHHHTT---CEEEEEESSGGGHHHHHHHH-------------HHT--------
T ss_pred CccccCCCEEEEeCCCCCCcHHHHHHHHHHHcC---CCEEEEecchhhHHHHHHHH-------------HHc--------
Confidence 4566889999999999 999999999999998 68899999844332222221 111
Q ss_pred CCceEEEeccCCCCCCCCChhhhHHHHh-------cCccEEEEcCccCCc------------cccHHHHHHHhHHHHHHH
Q 010075 84 SEKITFVPGDISSEDLGLKDSNLKEELW-------NELDIMVNSAAITKF------------DERYDVAFGINTLGVIHL 144 (519)
Q Consensus 84 ~~~v~~v~gDl~~~~lgls~~~~~~~l~-------~~vdiViH~Aa~v~f------------~~~~~~~~~~Nv~gt~~l 144 (519)
.++.++.+|++++ +..+.++ .++|++||+||.... .+.++..+++|+.|+.++
T Consensus 64 -~~~~~~~~Dv~~~-------~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l 135 (271)
T 3ek2_A 64 -GSELVFPCDVADD-------AQIDALFASLKTHWDSLDGLVHSIGFAPREAIAGDFLDGLTRENFRIAHDISAYSFPAL 135 (271)
T ss_dssp -TCCCEEECCTTCH-------HHHHHHHHHHHHHCSCEEEEEECCCCCCGGGGSSCTTTTCCHHHHHHHHHHHTTHHHHH
T ss_pred -CCcEEEECCCCCH-------HHHHHHHHHHHHHcCCCCEEEECCccCccccccCccccccCHHHHHHHHhhhHHHHHHH
Confidence 3478899999953 3233443 368999999997532 245778899999999999
Q ss_pred HHHHHhc-cCCceEEEEecceeecCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccc
Q 010075 145 VNFAKKC-VKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAK 223 (519)
Q Consensus 145 l~~a~~~-~~l~~~V~vSTa~v~~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~ 223 (519)
++.+... .+-.++|++||.......
T Consensus 136 ~~~~~~~~~~~g~iv~isS~~~~~~~------------------------------------------------------ 161 (271)
T 3ek2_A 136 AKAALPMLSDDASLLTLSYLGAERAI------------------------------------------------------ 161 (271)
T ss_dssp HHHHGGGEEEEEEEEEEECGGGTSBC------------------------------------------------------
T ss_pred HHHHHHHhccCceEEEEeccccccCC------------------------------------------------------
Confidence 9998753 223589999997654321
Q ss_pred cCCCCcHHHHHHHHHHHHHHHh-----hcCCcEEEEecCccccCCCCCCCcccccccccHHHHHHhhcCCceeeccCCCc
Q 010075 224 LHGWPNTYVFTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKV 298 (519)
Q Consensus 224 ~~~~~n~Y~~sK~~aE~lv~~~-----~~~lp~~IvRPs~V~g~~~~p~~gw~~~~~~~~~~i~~~~~g~~~~~~~~~~~ 298 (519)
.....|+.||+..+.+.+.+ ..++.+..++||.|.++.....+ ............ ..
T Consensus 162 --~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~-------~~~~~~~~~~~~---------~~ 223 (271)
T 3ek2_A 162 --PNYNTMGLAKAALEASVRYLAVSLGAKGVRVNAISAGPIKTLAASGIK-------SFGKILDFVESN---------SP 223 (271)
T ss_dssp --TTTTHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCC-----CCCH-------HHHHHHHHHHHH---------ST
T ss_pred --CCccchhHHHHHHHHHHHHHHHHHHhcCcEEEEEecCcccchhhhccc-------chHHHHHHHHhc---------CC
Confidence 22457999999999888765 34799999999999876543211 111122211111 11
Q ss_pred eeeeeeHHHHHHHHHHHHHHhccCCCCCcEEEecCCCC
Q 010075 299 IMDVIPVDMVVNAMIVAMVAHAKQPSDANIYHVGSSLR 336 (519)
Q Consensus 299 ~~d~vpVDdva~aii~a~~~~~~~~~~~~iyni~s~~~ 336 (519)
...+..++|+|++++.++..... .-.++++++.+|..
T Consensus 224 ~~~~~~pedva~~i~~l~s~~~~-~~tG~~i~vdgG~~ 260 (271)
T 3ek2_A 224 LKRNVTIEQVGNAGAFLLSDLAS-GVTAEVMHVDSGFN 260 (271)
T ss_dssp TSSCCCHHHHHHHHHHHHSGGGT-TCCSEEEEESTTGG
T ss_pred cCCCCCHHHHHHHHHHHcCcccC-CeeeeEEEECCCee
Confidence 22357789999999998864322 22478999998844
|
| >3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp} | Back alignment and structure |
|---|
Probab=99.75 E-value=1.7e-17 Score=166.21 Aligned_cols=214 Identities=14% Similarity=0.065 Sum_probs=138.8
Q ss_pred cCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 010075 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (519)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (519)
++||+|+||||||+||++++++|++.| .+|+++.|+... .+.+.++ +++. ..++.+
T Consensus 29 l~gk~vlVTGas~gIG~~la~~l~~~G---~~V~~~~r~~~~---~~~~~~~---------l~~~---------~~~~~~ 84 (301)
T 3tjr_A 29 FDGRAAVVTGGASGIGLATATEFARRG---ARLVLSDVDQPA---LEQAVNG---------LRGQ---------GFDAHG 84 (301)
T ss_dssp STTCEEEEETTTSHHHHHHHHHHHHTT---CEEEEEESCHHH---HHHHHHH---------HHHT---------TCCEEE
T ss_pred cCCCEEEEeCCCCHHHHHHHHHHHHCC---CEEEEEECCHHH---HHHHHHH---------HHhc---------CCceEE
Confidence 678999999999999999999999998 678999887422 1222111 1111 257899
Q ss_pred EeccCCCCCCCCChhhhHHHHh-------cCccEEEEcCccCCc-------cccHHHHHHHhHHHHHHHHHHHHhc---c
Q 010075 90 VPGDISSEDLGLKDSNLKEELW-------NELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKC---V 152 (519)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~-------~~vdiViH~Aa~v~f-------~~~~~~~~~~Nv~gt~~ll~~a~~~---~ 152 (519)
+.+|++++ +..+.++ .++|+|||+||.... .+.++..+++|+.|+.++++.+... .
T Consensus 85 ~~~Dv~d~-------~~v~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~ 157 (301)
T 3tjr_A 85 VVCDVRHL-------DEMVRLADEAFRLLGGVDVVFSNAGIVVAGPLAQMNHDDWRWVIDIDLWGSIHAVEAFLPRLLEQ 157 (301)
T ss_dssp EECCTTCH-------HHHHHHHHHHHHHHSSCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH
T ss_pred EEccCCCH-------HHHHHHHHHHHHhCCCCCEEEECCCcCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhc
Confidence 99999963 3233333 379999999997632 2567788999999999999887542 1
Q ss_pred C-CceEEEEecceeecCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcHH
Q 010075 153 K-LKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTY 231 (519)
Q Consensus 153 ~-l~~~V~vSTa~v~~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~Y 231 (519)
+ ..++|++||...+... .....|
T Consensus 158 ~~~g~iv~isS~~~~~~~--------------------------------------------------------~~~~~Y 181 (301)
T 3tjr_A 158 GTGGHIAFTASFAGLVPN--------------------------------------------------------AGLGTY 181 (301)
T ss_dssp CSCEEEEEECCGGGTSCC--------------------------------------------------------TTBHHH
T ss_pred CCCcEEEEeCchhhcCCC--------------------------------------------------------CCchHH
Confidence 2 5689999998654311 224579
Q ss_pred HHHHHHHHHHHHHh-----hcCCcEEEEecCccccCCCCCCCcccccccccHHHHHHhhcCCceeeccCCCceeeeeeHH
Q 010075 232 VFTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVD 306 (519)
Q Consensus 232 ~~sK~~aE~lv~~~-----~~~lp~~IvRPs~V~g~~~~p~~gw~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~d~vpVD 306 (519)
+.||+..+.+.+.. ..++.+.+++||.|.++....... ....... .........+......++++++
T Consensus 182 ~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~-------~~~~~~~-~~~~~~~~~~~~~~~~~~~~pe 253 (301)
T 3tjr_A 182 GVAKYGVVGLAETLAREVKPNGIGVSVLCPMVVETKLVSNSER-------IRGADYG-MSATPEGAFGPLPTQDESVSAD 253 (301)
T ss_dssp HHHHHHHHHHHHHHHHHHGGGTEEEEEECCSCCCSSHHHHHHH-------HC-----------------------CCCHH
T ss_pred HHHHHHHHHHHHHHHHHhcccCcEEEEEECCcccccccccccc-------ccchhhc-cccChhhhccccccccCCCCHH
Confidence 99999888887654 347999999999987653210000 0000000 0000111112223445689999
Q ss_pred HHHHHHHHHHHH
Q 010075 307 MVVNAMIVAMVA 318 (519)
Q Consensus 307 dva~aii~a~~~ 318 (519)
|||++++.++..
T Consensus 254 dvA~~i~~~l~~ 265 (301)
T 3tjr_A 254 DVARLTADAILA 265 (301)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHhc
Confidence 999999999975
|
| >1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.75 E-value=2.5e-17 Score=163.14 Aligned_cols=232 Identities=12% Similarity=0.115 Sum_probs=150.5
Q ss_pred cCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 010075 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (519)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (519)
+++|+++||||+|+||++++++|++.| .+|+++.|+... .+.+.++ +.+..+ ...++.+
T Consensus 4 l~~k~vlVTGas~gIG~~ia~~l~~~G---~~V~~~~r~~~~---~~~~~~~---------~~~~~~------~~~~~~~ 62 (280)
T 1xkq_A 4 FSNKTVIITGSSNGIGRTTAILFAQEG---ANVTITGRSSER---LEETRQI---------ILKSGV------SEKQVNS 62 (280)
T ss_dssp TTTCEEEETTCSSHHHHHHHHHHHHTT---CEEEEEESCHHH---HHHHHHH---------HHTTTC------CGGGEEE
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHCC---CEEEEEeCCHHH---HHHHHHH---------HHHcCC------CCcceEE
Confidence 578999999999999999999999998 678999886421 1222111 111100 0126889
Q ss_pred EeccCCCCCCCCChhhhHHHHh-------cCccEEEEcCccCCc-----------cccHHHHHHHhHHHHHHHHHHHHhc
Q 010075 90 VPGDISSEDLGLKDSNLKEELW-------NELDIMVNSAAITKF-----------DERYDVAFGINTLGVIHLVNFAKKC 151 (519)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~-------~~vdiViH~Aa~v~f-----------~~~~~~~~~~Nv~gt~~ll~~a~~~ 151 (519)
+.+|++++ +..+.++ .++|+|||+||.... .+.++..+++|+.|+.++++.+...
T Consensus 63 ~~~Dv~~~-------~~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~ 135 (280)
T 1xkq_A 63 VVADVTTE-------DGQDQIINSTLKQFGKIDVLVNNAGAAIPDAFGTTGTDQGIDIYHKTLKLNLQAVIEMTKKVKPH 135 (280)
T ss_dssp EECCTTSH-------HHHHHHHHHHHHHHSCCCEEEECCCCCCCCTTCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred EEecCCCH-------HHHHHHHHHHHHhcCCCCEEEECCCCCCCCCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence 99999953 2223333 379999999997532 1457788999999999999887642
Q ss_pred ---cCCceEEEEecceeecCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCC
Q 010075 152 ---VKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWP 228 (519)
Q Consensus 152 ---~~l~~~V~vSTa~v~~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~ 228 (519)
.+ .++|++||...+.... ...
T Consensus 136 ~~~~~-g~iv~isS~~~~~~~~-------------------------------------------------------~~~ 159 (280)
T 1xkq_A 136 LVASK-GEIVNVSSIVAGPQAQ-------------------------------------------------------PDF 159 (280)
T ss_dssp HHHHT-CEEEEECCGGGSSSCC-------------------------------------------------------CSS
T ss_pred hhcCC-CcEEEecCccccCCCC-------------------------------------------------------Ccc
Confidence 23 7999999986543210 123
Q ss_pred cHHHHHHHHHHHHHHHh-----hcCCcEEEEecCccccCCCCCCCcccccccccHHHHHHhhcCCceeeccCCCceeeee
Q 010075 229 NTYVFTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVI 303 (519)
Q Consensus 229 n~Y~~sK~~aE~lv~~~-----~~~lp~~IvRPs~V~g~~~~p~~gw~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~d~v 303 (519)
..|+.||+..+.+.+.. ..++++.+++||.|.++.......+................. .....+.
T Consensus 160 ~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~---------~p~~~~~ 230 (280)
T 1xkq_A 160 LYYAIAKAALDQYTRSTAIDLAKFGIRVNSVSPGMVETGFTNAMGMPDQASQKFYNFMASHKEC---------IPIGAAG 230 (280)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCBCSSHHHHTTCCHHHHHHHHHHHHHCTTT---------CTTSSCB
T ss_pred cHHHHHHHHHHHHHHHHHHHhccCCeEEEEEeeCcCcCCcccccccccccccchHHHHHHHHcC---------CCCCCCC
Confidence 57999999999888765 358999999999998864321100000000000111111111 1123478
Q ss_pred eHHHHHHHHHHHHHHhccCCCCCcEEEecCC
Q 010075 304 PVDMVVNAMIVAMVAHAKQPSDANIYHVGSS 334 (519)
Q Consensus 304 pVDdva~aii~a~~~~~~~~~~~~iyni~s~ 334 (519)
.++|+|++++.++.......-.++++++.+|
T Consensus 231 ~pedvA~~v~~l~s~~~~~~~tG~~i~vdgG 261 (280)
T 1xkq_A 231 KPEHIANIILFLADRNLSFYILGQSIVADGG 261 (280)
T ss_dssp CHHHHHHHHHHHHCHHHHTTCCSCEEEESTT
T ss_pred CHHHHHHHHHHhcCcccccCccCCeEEECCC
Confidence 9999999999988643011123689999887
|
| >3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444} | Back alignment and structure |
|---|
Probab=99.75 E-value=2.2e-17 Score=166.84 Aligned_cols=218 Identities=18% Similarity=0.141 Sum_probs=135.2
Q ss_pred cCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 010075 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (519)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (519)
++||+||||||||+||+++++.|++.| .+|++..|+... .+++.++ +....+ ..++.+
T Consensus 6 l~~k~vlVTGas~gIG~~la~~l~~~G---~~Vv~~~r~~~~---~~~~~~~---------l~~~~~-------~~~~~~ 63 (319)
T 3ioy_A 6 FAGRTAFVTGGANGVGIGLVRQLLNQG---CKVAIADIRQDS---IDKALAT---------LEAEGS-------GPEVMG 63 (319)
T ss_dssp CTTCEEEEETTTSTHHHHHHHHHHHTT---CEEEEEESCHHH---HHHHHHH---------HHHHTC-------GGGEEE
T ss_pred CCCCEEEEcCCchHHHHHHHHHHHHCC---CEEEEEECCHHH---HHHHHHH---------HHhcCC-------CCeEEE
Confidence 578999999999999999999999998 678999997432 1222111 111111 137899
Q ss_pred EeccCCCCCCCCChhhhHHHHh-------cCccEEEEcCccCCc-------cccHHHHHHHhHHHHHHHHHHHHhcc---
Q 010075 90 VPGDISSEDLGLKDSNLKEELW-------NELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKCV--- 152 (519)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~-------~~vdiViH~Aa~v~f-------~~~~~~~~~~Nv~gt~~ll~~a~~~~--- 152 (519)
+.+|++++ +..+.++ .++|+|||+||.... .+.++..+++|+.|+.++++.+...-
T Consensus 64 ~~~Dl~~~-------~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~ 136 (319)
T 3ioy_A 64 VQLDVASR-------EGFKMAADEVEARFGPVSILCNNAGVNLFQPIEESSYDDWDWLLGVNLHGVVNGVTTFVPRMVER 136 (319)
T ss_dssp EECCTTCH-------HHHHHHHHHHHHHTCCEEEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH
T ss_pred EECCCCCH-------HHHHHHHHHHHHhCCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHh
Confidence 99999963 3223333 368999999997532 25677889999999999998876531
Q ss_pred ------CCceEEEEecceeecCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCC
Q 010075 153 ------KLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHG 226 (519)
Q Consensus 153 ------~l~~~V~vSTa~v~~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~ 226 (519)
+-.++|++||...+... .
T Consensus 137 ~~~~~~~~g~iV~isS~a~~~~~--------------------------------------------------------~ 160 (319)
T 3ioy_A 137 VKAGEQKGGHVVNTASMAAFLAA--------------------------------------------------------G 160 (319)
T ss_dssp HHTTSCCCCEEEEECCGGGTCCC--------------------------------------------------------S
T ss_pred hhccCCCCcEEEEecccccccCC--------------------------------------------------------C
Confidence 24579999998654321 2
Q ss_pred CCcHHHHHHH----HHHHHHHHh-hcCCcEEEEecCccccCCCCCCCcccccccccHHHHHHhhcCCceeeccCCCceee
Q 010075 227 WPNTYVFTKT----MGEMLMQQS-KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMD 301 (519)
Q Consensus 227 ~~n~Y~~sK~----~aE~lv~~~-~~~lp~~IvRPs~V~g~~~~p~~gw~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~d 301 (519)
....|+.||+ ++|.+..++ ..++.+++++||.|.++...+....... ...............+ ......
T Consensus 161 ~~~~Y~aSKaal~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~---~~~~~~~~~~~~~~~~---~~~~~~ 234 (319)
T 3ioy_A 161 SPGIYNTTKFAVRGLSESLHYSLLKYEIGVSVLCPGLVKSYIYASDDIRPDA---LKGEVKPVDKTAVERL---AGVHEF 234 (319)
T ss_dssp SSHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEECCCCBC-----------------------------------CCGGGS
T ss_pred CCHHHHHHHHHHHHHHHHHHHHhhhcCCEEEEEEcCeEccCcccccccCchh---hcccccchhHHHHHHH---HHhhhc
Confidence 2357999999 555555555 4589999999999987654221100000 0000000000000000 011112
Q ss_pred eeeHHHHHHHHHHHHHH
Q 010075 302 VIPVDMVVNAMIVAMVA 318 (519)
Q Consensus 302 ~vpVDdva~aii~a~~~ 318 (519)
.++++++|++++.++..
T Consensus 235 ~~~pe~vA~~~~~al~~ 251 (319)
T 3ioy_A 235 GMEPDVIGARVIEAMKA 251 (319)
T ss_dssp SBCHHHHHHHHHHHHHT
T ss_pred CCCHHHHHHHHHHHHHc
Confidence 27999999999999874
|
| >3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase, oxidoreductase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B} | Back alignment and structure |
|---|
Probab=99.75 E-value=3.8e-17 Score=160.87 Aligned_cols=224 Identities=9% Similarity=0.072 Sum_probs=148.8
Q ss_pred hcCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceE
Q 010075 9 FLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKIT 88 (519)
Q Consensus 9 ~~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~ 88 (519)
.+++|+++||||+|+||+++++.|++.| .+|+++.|..... .+...++ ++. ...++.
T Consensus 22 ~~~~k~vlITGas~gIG~~~a~~l~~~G---~~v~~~~~~~~~~--~~~~~~~---------~~~---------~~~~~~ 78 (269)
T 3gk3_A 22 MQAKRVAFVTGGMGGLGAAISRRLHDAG---MAVAVSHSERNDH--VSTWLMH---------ERD---------AGRDFK 78 (269)
T ss_dssp --CCCEEEETTTTSHHHHHHHHHHHTTT---CEEEEEECSCHHH--HHHHHHH---------HHT---------TTCCCE
T ss_pred hhcCCEEEEECCCchHHHHHHHHHHHCC---CEEEEEcCCchHH--HHHHHHH---------HHh---------cCCceE
Confidence 4678999999999999999999999998 5778777543211 1111101 110 135789
Q ss_pred EEeccCCCCCCCCChhhhHHHHh-------cCccEEEEcCccCCc-------cccHHHHHHHhHHHHHHHHHHHHhc---
Q 010075 89 FVPGDISSEDLGLKDSNLKEELW-------NELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKC--- 151 (519)
Q Consensus 89 ~v~gDl~~~~lgls~~~~~~~l~-------~~vdiViH~Aa~v~f-------~~~~~~~~~~Nv~gt~~ll~~a~~~--- 151 (519)
++.+|++++ +..+.++ .++|+|||+||.... .+.++..+++|+.|+.++++.+...
T Consensus 79 ~~~~Dl~~~-------~~v~~~~~~~~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~ 151 (269)
T 3gk3_A 79 AYAVDVADF-------ESCERCAEKVLADFGKVDVLINNAGITRDATFMKMTKGDWDAVMRTDLDAMFNVTKQFIAGMVE 151 (269)
T ss_dssp EEECCTTCH-------HHHHHHHHHHHHHHSCCSEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHH
T ss_pred EEEecCCCH-------HHHHHHHHHHHHHcCCCCEEEECCCcCCCcchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHh
Confidence 999999963 2223333 379999999997642 2567888999999999998887542
Q ss_pred cCCceEEEEecceeecCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcHH
Q 010075 152 VKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTY 231 (519)
Q Consensus 152 ~~l~~~V~vSTa~v~~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~Y 231 (519)
.+..++|++||...+... .....|
T Consensus 152 ~~~g~iv~isS~~~~~~~--------------------------------------------------------~~~~~Y 175 (269)
T 3gk3_A 152 RRFGRIVNIGSVNGSRGA--------------------------------------------------------FGQANY 175 (269)
T ss_dssp HTCEEEEEECCHHHHHCC--------------------------------------------------------TTBHHH
T ss_pred cCCCEEEEeCChhhccCC--------------------------------------------------------CCcchH
Confidence 355799999997544211 223579
Q ss_pred HHHHHHHHHHHHHh-----hcCCcEEEEecCccccCCCCCCCcccccccccHHHHHHhhcCCceeeccCCCceeeeeeHH
Q 010075 232 VFTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVD 306 (519)
Q Consensus 232 ~~sK~~aE~lv~~~-----~~~lp~~IvRPs~V~g~~~~p~~gw~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~d~vpVD 306 (519)
+.||+..+.+++.. ..++++..++||.|.++.....+.. ... .. .........+..++
T Consensus 176 ~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~---------~~~---~~-----~~~~~~~~~~~~p~ 238 (269)
T 3gk3_A 176 ASAKAGIHGFTKTLALETAKRGITVNTVSPGYLATAMVEAVPQD---------VLE---AK-----ILPQIPVGRLGRPD 238 (269)
T ss_dssp HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTTTC-------------------CC-----SGGGCTTSSCBCHH
T ss_pred HHHHHHHHHHHHHHHHHhhhcCCEEEEEecCcccchhhhhhchh---------HHH---HH-----hhhcCCcCCccCHH
Confidence 99999888887654 3479999999999987654322110 000 00 01111223467899
Q ss_pred HHHHHHHHHHHHhccCCCCCcEEEecCCCC
Q 010075 307 MVVNAMIVAMVAHAKQPSDANIYHVGSSLR 336 (519)
Q Consensus 307 dva~aii~a~~~~~~~~~~~~iyni~s~~~ 336 (519)
|+|++++.++.... ..-.++++++.+|..
T Consensus 239 dvA~~v~~L~s~~~-~~itG~~i~vdgG~~ 267 (269)
T 3gk3_A 239 EVAALIAFLCSDDA-GFVTGADLAINGGMH 267 (269)
T ss_dssp HHHHHHHHHTSTTC-TTCCSCEEEESTTSC
T ss_pred HHHHHHHHHhCCCc-CCeeCcEEEECCCEe
Confidence 99999998876432 222478999998843
|
| >2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A* | Back alignment and structure |
|---|
Probab=99.75 E-value=8.3e-17 Score=158.94 Aligned_cols=220 Identities=14% Similarity=0.123 Sum_probs=149.4
Q ss_pred cCCCEEEEeCCc--cHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCce
Q 010075 10 LENKTILVSGVT--GFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKI 87 (519)
Q Consensus 10 ~~~k~VlITGaT--GFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v 87 (519)
++||+|+||||+ |+||+++++.|++.| .+|+++.|+.......+.+. ++. .++
T Consensus 4 l~~k~vlVTGas~~~gIG~~~a~~l~~~G---~~V~~~~r~~~~~~~~~~l~-------------~~~---------~~~ 58 (275)
T 2pd4_A 4 LKGKKGLIVGVANNKSIAYGIAQSCFNQG---ATLAFTYLNESLEKRVRPIA-------------QEL---------NSP 58 (275)
T ss_dssp TTTCEEEEECCCSTTSHHHHHHHHHHTTT---CEEEEEESSTTTHHHHHHHH-------------HHT---------TCC
T ss_pred CCCCEEEEECCCCCCcHHHHHHHHHHHCC---CEEEEEeCCHHHHHHHHHHH-------------Hhc---------CCc
Confidence 578999999999 999999999999998 67899999864221222221 111 236
Q ss_pred EEEeccCCCCCCCCChhhhHHHHh-------cCccEEEEcCccCCc-----------cccHHHHHHHhHHHHHHHHHHHH
Q 010075 88 TFVPGDISSEDLGLKDSNLKEELW-------NELDIMVNSAAITKF-----------DERYDVAFGINTLGVIHLVNFAK 149 (519)
Q Consensus 88 ~~v~gDl~~~~lgls~~~~~~~l~-------~~vdiViH~Aa~v~f-----------~~~~~~~~~~Nv~gt~~ll~~a~ 149 (519)
.++.+|++++ +..+.++ .++|++||+||.... .+.++..+++|+.|+.++++.+.
T Consensus 59 ~~~~~D~~~~-------~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~ 131 (275)
T 2pd4_A 59 YVYELDVSKE-------EHFKSLYNSVKKDLGSLDFIVHSVAFAPKEALEGSLLETSKSAFNTAMEISVYSLIELTNTLK 131 (275)
T ss_dssp CEEECCTTCH-------HHHHHHHHHHHHHTSCEEEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHG
T ss_pred EEEEcCCCCH-------HHHHHHHHHHHHHcCCCCEEEECCccCccccCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHH
Confidence 7899999963 2223333 378999999997532 24577889999999999999987
Q ss_pred hc-cCCceEEEEecceeecCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCC
Q 010075 150 KC-VKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWP 228 (519)
Q Consensus 150 ~~-~~l~~~V~vSTa~v~~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~ 228 (519)
.. .+-.++|++||....... ...
T Consensus 132 ~~~~~~g~iv~isS~~~~~~~--------------------------------------------------------~~~ 155 (275)
T 2pd4_A 132 PLLNNGASVLTLSYLGSTKYM--------------------------------------------------------AHY 155 (275)
T ss_dssp GGEEEEEEEEEEECGGGTSBC--------------------------------------------------------TTC
T ss_pred HHhccCCEEEEEecchhcCCC--------------------------------------------------------CCc
Confidence 63 122589999996543210 123
Q ss_pred cHHHHHHHHHHHHHHHh-----hcCCcEEEEecCccccCCCCCCCcccccccccHHHHHHhhcCCceeeccCCCceeeee
Q 010075 229 NTYVFTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVI 303 (519)
Q Consensus 229 n~Y~~sK~~aE~lv~~~-----~~~lp~~IvRPs~V~g~~~~p~~gw~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~d~v 303 (519)
..|+.||+..+.+.+.. ..++.+..++||.|.++.....+. ............ + ...+.
T Consensus 156 ~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~-------~~~~~~~~~~~~----p-----~~~~~ 219 (275)
T 2pd4_A 156 NVMGLAKAALESAVRYLAVDLGKHHIRVNALSAGPIRTLASSGIAD-------FRMILKWNEINA----P-----LRKNV 219 (275)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCTTGGGSTT-------HHHHHHHHHHHS----T-----TSSCC
T ss_pred hhhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCccccchhhhccc-------cHHHHHHHHhcC----C-----cCCCC
Confidence 57999999999888764 348999999999998865422111 111111111110 0 11256
Q ss_pred eHHHHHHHHHHHHHHhccCCCCCcEEEecCC
Q 010075 304 PVDMVVNAMIVAMVAHAKQPSDANIYHVGSS 334 (519)
Q Consensus 304 pVDdva~aii~a~~~~~~~~~~~~iyni~s~ 334 (519)
+.+|+|++++.++.... ....++++++.+|
T Consensus 220 ~p~dva~~~~~l~s~~~-~~~tG~~~~vdgg 249 (275)
T 2pd4_A 220 SLEEVGNAGMYLLSSLS-SGVSGEVHFVDAG 249 (275)
T ss_dssp CHHHHHHHHHHHHSGGG-TTCCSCEEEESTT
T ss_pred CHHHHHHHHHHHhCccc-cCCCCCEEEECCC
Confidence 78999999999886432 2223678988876
|
| >3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A* | Back alignment and structure |
|---|
Probab=99.75 E-value=1.9e-17 Score=160.94 Aligned_cols=219 Identities=15% Similarity=0.144 Sum_probs=148.8
Q ss_pred hcCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceE
Q 010075 9 FLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKIT 88 (519)
Q Consensus 9 ~~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~ 88 (519)
-++||+++||||+|+||+++++.|++.| .+|+++.|+... .+.+. ++. ..++.
T Consensus 3 ~l~gk~vlVTGas~gIG~a~a~~l~~~G---~~V~~~~r~~~~---~~~~~-------------~~~--------~~~~~ 55 (247)
T 3rwb_A 3 RLAGKTALVTGAAQGIGKAIAARLAADG---ATVIVSDINAEG---AKAAA-------------ASI--------GKKAR 55 (247)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHTT---CEEEEECSCHHH---HHHHH-------------HHH--------CTTEE
T ss_pred CcCCCEEEEECCCCHHHHHHHHHHHHCC---CEEEEEeCCHHH---HHHHH-------------HHh--------CCceE
Confidence 4689999999999999999999999998 678888876321 11111 111 25788
Q ss_pred EEeccCCCCCCCCChhhhHHHHh-------cCccEEEEcCccCCc-------cccHHHHHHHhHHHHHHHHHHHH----h
Q 010075 89 FVPGDISSEDLGLKDSNLKEELW-------NELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAK----K 150 (519)
Q Consensus 89 ~v~gDl~~~~lgls~~~~~~~l~-------~~vdiViH~Aa~v~f-------~~~~~~~~~~Nv~gt~~ll~~a~----~ 150 (519)
++.+|++++ +..+.++ .++|++||+||.... .+.++..+++|+.|+.++++.+. +
T Consensus 56 ~~~~Dv~~~-------~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~ 128 (247)
T 3rwb_A 56 AIAADISDP-------GSVKALFAEIQALTGGIDILVNNASIVPFVAWDDVDLDHWRKIIDVNLTGTFIVTRAGTDQMRA 128 (247)
T ss_dssp ECCCCTTCH-------HHHHHHHHHHHHHHSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHH
T ss_pred EEEcCCCCH-------HHHHHHHHHHHHHCCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHH
Confidence 999999963 2223333 379999999997643 25678889999999999988743 3
Q ss_pred ccCCceEEEEecceeecCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcH
Q 010075 151 CVKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNT 230 (519)
Q Consensus 151 ~~~l~~~V~vSTa~v~~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~ 230 (519)
.+...++|++||....... .....
T Consensus 129 ~~~~g~iv~isS~~~~~~~--------------------------------------------------------~~~~~ 152 (247)
T 3rwb_A 129 AGKAGRVISIASNTFFAGT--------------------------------------------------------PNMAA 152 (247)
T ss_dssp HTCCEEEEEECCTHHHHTC--------------------------------------------------------TTCHH
T ss_pred cCCCcEEEEECchhhccCC--------------------------------------------------------CCchh
Confidence 2236799999997654321 22357
Q ss_pred HHHHHHHHHHHHHHh-----hcCCcEEEEecCccccCCCCCCCcccccccccHHHHHHhhcCCceeeccCCCceeeeeeH
Q 010075 231 YVFTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPV 305 (519)
Q Consensus 231 Y~~sK~~aE~lv~~~-----~~~lp~~IvRPs~V~g~~~~p~~gw~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~d~vpV 305 (519)
|+.||+..+.+.+.. ..++++..++||.|.++.....+. .....+... . .....+...
T Consensus 153 Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~-----~~~~~~~~~-~-----------~~~~r~~~p 215 (247)
T 3rwb_A 153 YVAAKGGVIGFTRALATELGKYNITANAVTPGLIESDGVKASPH-----NEAFGFVEM-L-----------QAMKGKGQP 215 (247)
T ss_dssp HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTSGG-----GGGHHHHHH-H-----------SSSCSCBCH
T ss_pred hHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcCcCccccccCh-----hHHHHHHhc-c-----------cccCCCcCH
Confidence 999998888887754 358999999999997753321110 000011110 0 011234678
Q ss_pred HHHHHHHHHHHHHhccCCCCCcEEEecCCC
Q 010075 306 DMVVNAMIVAMVAHAKQPSDANIYHVGSSL 335 (519)
Q Consensus 306 Ddva~aii~a~~~~~~~~~~~~iyni~s~~ 335 (519)
+|+|+++..++..... .-.++++++.+|.
T Consensus 216 edva~~v~~L~s~~~~-~itG~~i~vdGG~ 244 (247)
T 3rwb_A 216 EHIADVVSFLASDDAR-WITGQTLNVDAGM 244 (247)
T ss_dssp HHHHHHHHHHHSGGGT-TCCSCEEEESTTS
T ss_pred HHHHHHHHHHhCcccc-CCCCCEEEECCCc
Confidence 9999999988864332 2247899998873
|
| >3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.75 E-value=1.4e-16 Score=158.16 Aligned_cols=228 Identities=13% Similarity=0.057 Sum_probs=150.1
Q ss_pred cCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 010075 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (519)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (519)
+++|+|+||||+|+||++++++|++.| .+|+++.|+... .+++.+++ .+ ...++.+
T Consensus 26 ~~~k~~lVTGas~GIG~aia~~la~~G---~~V~~~~r~~~~---~~~~~~~l---------~~---------~~~~~~~ 81 (283)
T 3v8b_A 26 QPSPVALITGAGSGIGRATALALAADG---VTVGALGRTRTE---VEEVADEI---------VG---------AGGQAIA 81 (283)
T ss_dssp -CCCEEEEESCSSHHHHHHHHHHHHTT---CEEEEEESSHHH---HHHHHHHH---------TT---------TTCCEEE
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCC---CEEEEEeCCHHH---HHHHHHHH---------Hh---------cCCcEEE
Confidence 468999999999999999999999998 678888886422 22222111 11 1357889
Q ss_pred EeccCCCCCCCCChhhhHHHHh-------cCccEEEEcCccCCc--------cccHHHHHHHhHHHHHHHHHHHHhc---
Q 010075 90 VPGDISSEDLGLKDSNLKEELW-------NELDIMVNSAAITKF--------DERYDVAFGINTLGVIHLVNFAKKC--- 151 (519)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~-------~~vdiViH~Aa~v~f--------~~~~~~~~~~Nv~gt~~ll~~a~~~--- 151 (519)
+.+|++++ +..+.++ .++|++||+||.... .+.++..+++|+.|+..+++.+...
T Consensus 82 ~~~Dv~d~-------~~v~~~~~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~ 154 (283)
T 3v8b_A 82 LEADVSDE-------LQMRNAVRDLVLKFGHLDIVVANAGINGVWAPIDDLKPFEWDETIAVNLRGTFLTLHLTVPYLKQ 154 (283)
T ss_dssp EECCTTCH-------HHHHHHHHHHHHHHSCCCEEEECCCCCCCBCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHH
T ss_pred EEccCCCH-------HHHHHHHHHHHHHhCCCCEEEECCCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHH
Confidence 99999963 2222333 379999999997532 2467888999999999999987321
Q ss_pred cCCceEEEEecceeecCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcHH
Q 010075 152 VKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTY 231 (519)
Q Consensus 152 ~~l~~~V~vSTa~v~~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~Y 231 (519)
.+..++|++||........ ......|
T Consensus 155 ~~~g~Iv~isS~~~~~~~~------------------------------------------------------~~~~~~Y 180 (283)
T 3v8b_A 155 RGGGAIVVVSSINGTRTFT------------------------------------------------------TPGATAY 180 (283)
T ss_dssp HTCEEEEEECCSBTTTBCC------------------------------------------------------STTCHHH
T ss_pred cCCceEEEEcChhhccCCC------------------------------------------------------CCCchHH
Confidence 2567999999975432100 0224579
Q ss_pred HHHHHHHHHHHHHh-----hcCCcEEEEecCccccCCCCCCCcccccccccHHHHHHhhcCCceeeccCCCce--eeeee
Q 010075 232 VFTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVI--MDVIP 304 (519)
Q Consensus 232 ~~sK~~aE~lv~~~-----~~~lp~~IvRPs~V~g~~~~p~~gw~~~~~~~~~~i~~~~~g~~~~~~~~~~~~--~d~vp 304 (519)
+.||+..+.+.+.. ..++.+..++||.|.++....... .. .... ............. ..+..
T Consensus 181 ~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~------~~-~~~~----~~~~~~~~~~~p~~~~r~~~ 249 (283)
T 3v8b_A 181 TATKAAQVAIVQQLALELGKHHIRVNAVCPGAIETNISDNTKL------RH-EEET----AIPVEWPKGQVPITDGQPGR 249 (283)
T ss_dssp HHHHHHHHHHHHHHHHHTTTTTEEEEEEEECSBSSCTTCCTTB------CC-HHHH----SCCCBCTTCSCGGGTTCCBC
T ss_pred HHHHHHHHHHHHHHHHHhCccCcEEEEEEeCCCcCCccccccc------cc-chhh----hhhhhhhhhcCccccCCCCC
Confidence 99999999988765 357999999999998765432110 00 0000 0000001111111 34567
Q ss_pred HHHHHHHHHHHHHHhccCCCCCcEEEecCC
Q 010075 305 VDMVVNAMIVAMVAHAKQPSDANIYHVGSS 334 (519)
Q Consensus 305 VDdva~aii~a~~~~~~~~~~~~iyni~s~ 334 (519)
.+|+|++++.++..... .-.++++++.+|
T Consensus 250 pedvA~~v~fL~s~~a~-~itG~~i~vdGG 278 (283)
T 3v8b_A 250 SEDVAELIRFLVSERAR-HVTGSPVWIDGG 278 (283)
T ss_dssp HHHHHHHHHHHTSGGGT-TCCSCEEEESTT
T ss_pred HHHHHHHHHHHcCcccc-CCcCCEEEECcC
Confidence 89999999988864332 224789999877
|
| >1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.75 E-value=6.1e-17 Score=158.10 Aligned_cols=227 Identities=14% Similarity=0.067 Sum_probs=147.1
Q ss_pred CCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEEe
Q 010075 12 NKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVP 91 (519)
Q Consensus 12 ~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v~ 91 (519)
+|+|+||||||+||+++++.|++.| .+|+++.|+... .+.+.++ ++.. ..++.++.
T Consensus 2 ~k~vlVTGas~gIG~~ia~~l~~~G---~~V~~~~r~~~~---~~~~~~~---------~~~~---------~~~~~~~~ 57 (256)
T 1geg_A 2 KKVALVTGAGQGIGKAIALRLVKDG---FAVAIADYNDAT---AKAVASE---------INQA---------GGHAVAVK 57 (256)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTT---CEEEEEESCHHH---HHHHHHH---------HHHT---------TCCEEEEE
T ss_pred CCEEEEECCCChHHHHHHHHHHHCC---CEEEEEeCCHHH---HHHHHHH---------HHhc---------CCcEEEEE
Confidence 6899999999999999999999998 678999886421 1222111 1111 24688999
Q ss_pred ccCCCCCCCCChhhhHHHHhc-------CccEEEEcCccCCc-------cccHHHHHHHhHHHHHHHHHHHHhc---cC-
Q 010075 92 GDISSEDLGLKDSNLKEELWN-------ELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKC---VK- 153 (519)
Q Consensus 92 gDl~~~~lgls~~~~~~~l~~-------~vdiViH~Aa~v~f-------~~~~~~~~~~Nv~gt~~ll~~a~~~---~~- 153 (519)
+|+++ .+..+.+++ ++|++||+||.... .+.++..+++|+.|+.++++.+.+. .+
T Consensus 58 ~D~~~-------~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~ 130 (256)
T 1geg_A 58 VDVSD-------RDQVFAAVEQARKTLGGFDVIVNNAGVAPSTPIESITPEIVDKVYNINVKGVIWGIQAAVEAFKKEGH 130 (256)
T ss_dssp CCTTS-------HHHHHHHHHHHHHHTTCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTS
T ss_pred ecCCC-------HHHHHHHHHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCC
Confidence 99995 332334433 79999999997532 2457788999999999888877542 13
Q ss_pred CceEEEEecceeecCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcHHHH
Q 010075 154 LKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVF 233 (519)
Q Consensus 154 l~~~V~vSTa~v~~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~Y~~ 233 (519)
..++|++||...+... .....|+.
T Consensus 131 ~g~iv~isS~~~~~~~--------------------------------------------------------~~~~~Y~a 154 (256)
T 1geg_A 131 GGKIINACSQAGHVGN--------------------------------------------------------PELAVYSS 154 (256)
T ss_dssp CEEEEEECCGGGTSCC--------------------------------------------------------TTBHHHHH
T ss_pred CCEEEEECchhhcCCC--------------------------------------------------------CCchhHHH
Confidence 5799999997543211 12357999
Q ss_pred HHHHHHHHHHHh-----hcCCcEEEEecCccccCCCCCCC-ccccccc-ccHHHHHHhhcCCceeeccCCCceeeeeeHH
Q 010075 234 TKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFP-GWVEDLK-TINTLFVASAQGNLRCLVGETKVIMDVIPVD 306 (519)
Q Consensus 234 sK~~aE~lv~~~-----~~~lp~~IvRPs~V~g~~~~p~~-gw~~~~~-~~~~~i~~~~~g~~~~~~~~~~~~~d~vpVD 306 (519)
||+..+.+.+.. ..++++.+++||.|.++...... .+..... ........... ......+...+
T Consensus 155 sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~p~~r~~~p~ 225 (256)
T 1geg_A 155 SKFAVRGLTQTAARDLAPLGITVNGYCPGIVKTPMWAEIDRQVSEAAGKPLGYGTAEFAK---------RITLGRLSEPE 225 (256)
T ss_dssp HHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSHHHHHHHHHHHHHHTCCTTHHHHHHHT---------TCTTCSCBCHH
T ss_pred HHHHHHHHHHHHHHHHHHcCeEEEEEEECCCccchhhhhhhhccccccCChHHHHHHHHh---------cCCCCCCcCHH
Confidence 999999888764 35899999999999775321000 0000000 00001111111 01123478999
Q ss_pred HHHHHHHHHHHHhccCCCCCcEEEecCCC
Q 010075 307 MVVNAMIVAMVAHAKQPSDANIYHVGSSL 335 (519)
Q Consensus 307 dva~aii~a~~~~~~~~~~~~iyni~s~~ 335 (519)
|+|++++.++..... .-.++++++.+|.
T Consensus 226 dvA~~v~~l~s~~~~-~~tG~~i~vdGG~ 253 (256)
T 1geg_A 226 DVAACVSYLASPDSD-YMTGQSLLIDGGM 253 (256)
T ss_dssp HHHHHHHHHHSGGGT-TCCSCEEEESSSS
T ss_pred HHHHHHHHHhCcccc-CCCCCEEEeCCCc
Confidence 999999998864322 2237889998874
|
| >3tl3_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 1.85A {Mycobacterium ulcerans} | Back alignment and structure |
|---|
Probab=99.75 E-value=6.7e-17 Score=157.94 Aligned_cols=214 Identities=10% Similarity=0.119 Sum_probs=145.2
Q ss_pred cCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 010075 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (519)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (519)
+++|+++||||||+||++++++|++.| .+|+++.|... .+. ++ ...++.+
T Consensus 7 l~~k~vlVTGas~gIG~aia~~l~~~G---~~V~~~~r~~~------~~~-------------~~--------~~~~~~~ 56 (257)
T 3tl3_A 7 IRDAVAVVTGGASGLGLATTKRLLDAG---AQVVVLDIRGE------DVV-------------AD--------LGDRARF 56 (257)
T ss_dssp ---CEEEEETTTSHHHHHHHHHHHHHT---CEEEEEESSCH------HHH-------------HH--------TCTTEEE
T ss_pred ecCCEEEEeCCCCHHHHHHHHHHHHCC---CEEEEEeCchH------HHH-------------Hh--------cCCceEE
Confidence 578999999999999999999999999 67889888431 111 00 1367899
Q ss_pred EeccCCCCCCCCChhhhHHHHh------cCccEEEEcCccCC-----------ccccHHHHHHHhHHHHHHHHHHHHhc-
Q 010075 90 VPGDISSEDLGLKDSNLKEELW------NELDIMVNSAAITK-----------FDERYDVAFGINTLGVIHLVNFAKKC- 151 (519)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~------~~vdiViH~Aa~v~-----------f~~~~~~~~~~Nv~gt~~ll~~a~~~- 151 (519)
+.+|++++ +..+.+. .++|++||+||... -.+.++..+++|+.|+..+++.+...
T Consensus 57 ~~~D~~~~-------~~v~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~ 129 (257)
T 3tl3_A 57 AAADVTDE-------AAVASALDLAETMGTLRIVVNCAGTGNAIRVLSRDGVFSLAAFRKIVDINLVGSFNVLRLAAERI 129 (257)
T ss_dssp EECCTTCH-------HHHHHHHHHHHHHSCEEEEEECGGGSHHHHHHHHTCCCSHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EECCCCCH-------HHHHHHHHHHHHhCCCCEEEECCCCCCCcccccccccCCHHHHHHHHHHccHHHHHHHHHHHHHH
Confidence 99999963 2223333 38999999999742 12567888999999999999988653
Q ss_pred ----------cCCceEEEEecceeecCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccc
Q 010075 152 ----------VKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTER 221 (519)
Q Consensus 152 ----------~~l~~~V~vSTa~v~~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~ 221 (519)
.+-.++|++||...+...
T Consensus 130 ~~~~~~~~~~~~~g~iv~isS~~~~~~~---------------------------------------------------- 157 (257)
T 3tl3_A 130 AKTEPVGPNAEERGVIINTASVAAFDGQ---------------------------------------------------- 157 (257)
T ss_dssp TTSCCC--CCCCSEEEEEECCCC--CCH----------------------------------------------------
T ss_pred HHhcccccccCCCcEEEEEcchhhcCCC----------------------------------------------------
Confidence 134589999998654311
Q ss_pred cccCCCCcHHHHHHHHHHHHHHHh-----hcCCcEEEEecCccccCCCCCCCcccccccccHHHHHHhhcCCceeeccCC
Q 010075 222 AKLHGWPNTYVFTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGET 296 (519)
Q Consensus 222 ~~~~~~~n~Y~~sK~~aE~lv~~~-----~~~lp~~IvRPs~V~g~~~~p~~gw~~~~~~~~~~i~~~~~g~~~~~~~~~ 296 (519)
.....|+.||+..+.+.+.. ..++.+..++||.|.++..... ............ +.
T Consensus 158 ----~~~~~Y~asKaa~~~~~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~---------~~~~~~~~~~~~----~~-- 218 (257)
T 3tl3_A 158 ----IGQAAYSASKGGVVGMTLPIARDLASHRIRVMTIAPGLFDTPLLASL---------PEEARASLGKQV----PH-- 218 (257)
T ss_dssp ----HHHHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTC------------CHHHHHHHHHTS----SS--
T ss_pred ----CCCccHHHHHHHHHHHHHHHHHHhcccCcEEEEEEecCccChhhhhc---------cHHHHHHHHhcC----CC--
Confidence 11246999999888887654 4579999999999977644221 111111111111 00
Q ss_pred CceeeeeeHHHHHHHHHHHHHHhccCCCCCcEEEecCCCC
Q 010075 297 KVIMDVIPVDMVVNAMIVAMVAHAKQPSDANIYHVGSSLR 336 (519)
Q Consensus 297 ~~~~d~vpVDdva~aii~a~~~~~~~~~~~~iyni~s~~~ 336 (519)
...+...+|+|++++.++... .-.++++++.+|..
T Consensus 219 --~~r~~~p~dva~~v~~l~s~~---~itG~~i~vdGG~~ 253 (257)
T 3tl3_A 219 --PSRLGNPDEYGALAVHIIENP---MLNGEVIRLDGAIR 253 (257)
T ss_dssp --SCSCBCHHHHHHHHHHHHHCT---TCCSCEEEESTTC-
T ss_pred --CCCccCHHHHHHHHHHHhcCC---CCCCCEEEECCCcc
Confidence 124678999999999998642 22478999988843
|
| >2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=99.75 E-value=4.3e-17 Score=161.20 Aligned_cols=221 Identities=14% Similarity=0.135 Sum_probs=147.4
Q ss_pred cCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 010075 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (519)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (519)
+++|+|+||||||+||++++++|++.| .+|+++.|+... .+.+.+++ .+ ..++.+
T Consensus 27 l~~k~vlVTGas~gIG~aia~~L~~~G---~~V~~~~r~~~~---~~~~~~~l---------~~----------~~~~~~ 81 (276)
T 2b4q_A 27 LAGRIALVTGGSRGIGQMIAQGLLEAG---ARVFICARDAEA---CADTATRL---------SA----------YGDCQA 81 (276)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTT---CEEEEECSCHHH---HHHHHHHH---------TT----------SSCEEE
T ss_pred CCCCEEEEeCCCChHHHHHHHHHHHCC---CEEEEEeCCHHH---HHHHHHHH---------Hh----------cCceEE
Confidence 578999999999999999999999998 678888886421 12221111 00 126888
Q ss_pred EeccCCCCCCCCChhhhHHHHh-------cCccEEEEcCccCCc-------cccHHHHHHHhHHHHHHHHHHHHhc---c
Q 010075 90 VPGDISSEDLGLKDSNLKEELW-------NELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKC---V 152 (519)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~-------~~vdiViH~Aa~v~f-------~~~~~~~~~~Nv~gt~~ll~~a~~~---~ 152 (519)
+.+|++++ +..+.++ .++|+|||+||.... .+.++..+++|+.|+.++++.+... .
T Consensus 82 ~~~Dv~d~-------~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~ 154 (276)
T 2b4q_A 82 IPADLSSE-------AGARRLAQALGELSARLDILVNNAGTSWGAALESYPVSGWEKVMQLNVTSVFSCIQQLLPLLRRS 154 (276)
T ss_dssp CCCCTTSH-------HHHHHHHHHHHHHCSCCSEEEECCCCCCCCCTTSCCSHHHHHHHHHHTHHHHHHHHHHHHHHHHH
T ss_pred EEeeCCCH-------HHHHHHHHHHHHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc
Confidence 99999953 2223333 379999999997532 2567888999999998888776431 1
Q ss_pred CC----ceEEEEecceeecCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCC
Q 010075 153 KL----KVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWP 228 (519)
Q Consensus 153 ~l----~~~V~vSTa~v~~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~ 228 (519)
+. .++|++||...+.... ...
T Consensus 155 ~~~~~~g~iV~isS~~~~~~~~-------------------------------------------------------~~~ 179 (276)
T 2b4q_A 155 ASAENPARVINIGSVAGISAMG-------------------------------------------------------EQA 179 (276)
T ss_dssp CCSSSCEEEEEECCGGGTCCCC-------------------------------------------------------CSC
T ss_pred cCCCCCCEEEEECCHHHcCCCC-------------------------------------------------------CCc
Confidence 33 7999999986543210 112
Q ss_pred cHHHHHHHHHHHHHHHh-----hcCCcEEEEecCccccCCCCCCCcccccccccHHHHHHhhcCCceeeccCCCceeeee
Q 010075 229 NTYVFTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVI 303 (519)
Q Consensus 229 n~Y~~sK~~aE~lv~~~-----~~~lp~~IvRPs~V~g~~~~p~~gw~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~d~v 303 (519)
..|+.||+..|.+.+.+ ..++++.+++||.|.++.... +... ........ .. .....+.
T Consensus 180 ~~Y~asK~a~~~~~~~la~e~~~~gI~vn~v~PG~v~T~~~~~---~~~~------~~~~~~~~--~~-----~p~~r~~ 243 (276)
T 2b4q_A 180 YAYGPSKAALHQLSRMLAKELVGEHINVNVIAPGRFPSRMTRH---IAND------PQALEADS--AS-----IPMGRWG 243 (276)
T ss_dssp TTHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCSTTTHH---HHHC------HHHHHHHH--HT-----STTSSCC
T ss_pred cccHHHHHHHHHHHHHHHHHhcccCeEEEEEEeccCcCcchhh---cchh------HHHHHHhh--cC-----CCCCCcC
Confidence 27999999999988765 358999999999997754311 0000 00111100 00 0112468
Q ss_pred eHHHHHHHHHHHHHHhccCCCCCcEEEecCC
Q 010075 304 PVDMVVNAMIVAMVAHAKQPSDANIYHVGSS 334 (519)
Q Consensus 304 pVDdva~aii~a~~~~~~~~~~~~iyni~s~ 334 (519)
..+|+|++++.++..... .-.++++++.+|
T Consensus 244 ~p~dvA~~v~~l~s~~~~-~~tG~~i~vdGG 273 (276)
T 2b4q_A 244 RPEEMAALAISLAGTAGA-YMTGNVIPIDGG 273 (276)
T ss_dssp CHHHHHHHHHHHHSGGGT-TCCSCEEEESTT
T ss_pred CHHHHHHHHHHHhCcccc-CCCCCEEEeCCC
Confidence 899999999998864322 224789999877
|
| >4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis} | Back alignment and structure |
|---|
Probab=99.75 E-value=7.2e-17 Score=158.66 Aligned_cols=230 Identities=16% Similarity=0.097 Sum_probs=151.9
Q ss_pred cCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 010075 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (519)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (519)
++||+|+||||+|+||+++++.|++.| .+|+++.|+... .+.+.++ +.+.. ..++.+
T Consensus 18 l~~k~vlVTGas~gIG~aia~~l~~~G---~~V~~~~r~~~~---~~~~~~~---------l~~~~--------~~~~~~ 74 (266)
T 4egf_A 18 LDGKRALITGATKGIGADIARAFAAAG---ARLVLSGRDVSE---LDAARRA---------LGEQF--------GTDVHT 74 (266)
T ss_dssp CTTCEEEETTTTSHHHHHHHHHHHHTT---CEEEEEESCHHH---HHHHHHH---------HHHHH--------CCCEEE
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCC---CEEEEEeCCHHH---HHHHHHH---------HHHhc--------CCcEEE
Confidence 578999999999999999999999998 678999886422 1222111 11111 257899
Q ss_pred EeccCCCCCCCCChhhhHHHHhcCccEEEEcCccCCc-------cccHHHHHHHhHHHHHHHHHHHHhc----cCCceEE
Q 010075 90 VPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKC----VKLKVFV 158 (519)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~~~vdiViH~Aa~v~f-------~~~~~~~~~~Nv~gt~~ll~~a~~~----~~l~~~V 158 (519)
+.+|+++++.--...+...+...++|++||+||.... .+.++..+++|+.|+..+++.+.+. +.-.++|
T Consensus 75 ~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv 154 (266)
T 4egf_A 75 VAIDLAEPDAPAELARRAAEAFGGLDVLVNNAGISHPQPVVDTDPQLFDATIAVNLRAPALLASAVGKAMVAAGEGGAII 154 (266)
T ss_dssp EECCTTSTTHHHHHHHHHHHHHTSCSEEEEECCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEE
T ss_pred EEecCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEE
Confidence 9999996431000000111122479999999997642 2457788999999999998887542 1246899
Q ss_pred EEecceeecCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcHHHHHHHHH
Q 010075 159 HVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMG 238 (519)
Q Consensus 159 ~vSTa~v~~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~Y~~sK~~a 238 (519)
++||...+... .....|+.||+..
T Consensus 155 ~isS~~~~~~~--------------------------------------------------------~~~~~Y~asK~a~ 178 (266)
T 4egf_A 155 TVASAAALAPL--------------------------------------------------------PDHYAYCTSKAGL 178 (266)
T ss_dssp EECCGGGTSCC--------------------------------------------------------TTCHHHHHHHHHH
T ss_pred EEcchhhccCC--------------------------------------------------------CCChHHHHHHHHH
Confidence 99998654311 2235799999999
Q ss_pred HHHHHHh-----hcCCcEEEEecCccccCCCCCCCcccccccccHHHHHHhhcCCceeeccCCCceeeeeeHHHHHHHHH
Q 010075 239 EMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMI 313 (519)
Q Consensus 239 E~lv~~~-----~~~lp~~IvRPs~V~g~~~~p~~gw~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~d~vpVDdva~aii 313 (519)
+.+.+.+ ..++++..++||.|.++..... ............. .....+..++|+|++++
T Consensus 179 ~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~-------~~~~~~~~~~~~~---------~p~~r~~~p~dva~~v~ 242 (266)
T 4egf_A 179 VMATKVLARELGPHGIRANSVCPTVVLTEMGQRV-------WGDEAKSAPMIAR---------IPLGRFAVPHEVSDAVV 242 (266)
T ss_dssp HHHHHHHHHHHGGGTEEEEEEEESCBCSHHHHHH-------TCSHHHHHHHHTT---------CTTSSCBCHHHHHHHHH
T ss_pred HHHHHHHHHHHhhhCeEEEEEEeCCCcCchhhhh-------ccChHHHHHHHhc---------CCCCCCcCHHHHHHHHH
Confidence 9888755 3579999999999977542110 0011111111111 12234577999999999
Q ss_pred HHHHHhccCCCCCcEEEecCCC
Q 010075 314 VAMVAHAKQPSDANIYHVGSSL 335 (519)
Q Consensus 314 ~a~~~~~~~~~~~~iyni~s~~ 335 (519)
.++..... .-.++++++.+|.
T Consensus 243 ~L~s~~~~-~itG~~i~vdGG~ 263 (266)
T 4egf_A 243 WLASDAAS-MINGVDIPVDGGY 263 (266)
T ss_dssp HHHSGGGT-TCCSCEEEESTTG
T ss_pred HHhCchhc-CccCcEEEECCCc
Confidence 98864332 2247899998873
|
| >3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis} | Back alignment and structure |
|---|
Probab=99.75 E-value=8.5e-17 Score=158.20 Aligned_cols=238 Identities=17% Similarity=0.157 Sum_probs=153.5
Q ss_pred cCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 010075 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (519)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (519)
++||+++||||+|+||++++++|++.| .+|+++.|+... .+... +.+++..+ ..++.+
T Consensus 8 l~~k~~lVTGas~gIG~aia~~l~~~G---~~V~~~~r~~~~---~~~~~---------~~l~~~~~-------~~~~~~ 65 (267)
T 3t4x_A 8 LKGKTALVTGSTAGIGKAIATSLVAEG---ANVLINGRREEN---VNETI---------KEIRAQYP-------DAILQP 65 (267)
T ss_dssp CTTCEEEETTCSSHHHHHHHHHHHHTT---CEEEEEESSHHH---HHHHH---------HHHHHHCT-------TCEEEE
T ss_pred cCCCEEEEeCCCcHHHHHHHHHHHHCC---CEEEEEeCCHHH---HHHHH---------HHHHhhCC-------CceEEE
Confidence 678999999999999999999999998 678898887422 11111 11222221 246788
Q ss_pred EeccCCCCCCCCChhhhHHHHh---cCccEEEEcCccCCc-------cccHHHHHHHhHHHHHHHHHHHHhc---cCCce
Q 010075 90 VPGDISSEDLGLKDSNLKEELW---NELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKC---VKLKV 156 (519)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~---~~vdiViH~Aa~v~f-------~~~~~~~~~~Nv~gt~~ll~~a~~~---~~l~~ 156 (519)
+.+|++++ +..+.+. .++|++||+||.... .+.++..+++|+.|+..+.+.+.+. .+..+
T Consensus 66 ~~~D~~~~-------~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~ 138 (267)
T 3t4x_A 66 VVADLGTE-------QGCQDVIEKYPKVDILINNLGIFEPVEYFDIPDEDWFKLFEVNIMSGVRLTRSYLKKMIERKEGR 138 (267)
T ss_dssp EECCTTSH-------HHHHHHHHHCCCCSEEEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTEEE
T ss_pred EecCCCCH-------HHHHHHHHhcCCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCE
Confidence 99999953 3333444 479999999997642 2567788999999988877665431 35679
Q ss_pred EEEEecceeecCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcHHHHHHH
Q 010075 157 FVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKT 236 (519)
Q Consensus 157 ~V~vSTa~v~~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~Y~~sK~ 236 (519)
+|++||...+... .....|+.||+
T Consensus 139 iv~isS~~~~~~~--------------------------------------------------------~~~~~Y~asKa 162 (267)
T 3t4x_A 139 VIFIASEAAIMPS--------------------------------------------------------QEMAHYSATKT 162 (267)
T ss_dssp EEEECCGGGTSCC--------------------------------------------------------TTCHHHHHHHH
T ss_pred EEEEcchhhccCC--------------------------------------------------------CcchHHHHHHH
Confidence 9999998654211 22457999999
Q ss_pred HHHHHHHHh-----hcCCcEEEEecCccccCCCCCC-Ccccccc-cccHHHHHHhhcCCceeeccCCCceeeeeeHHHHH
Q 010075 237 MGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPF-PGWVEDL-KTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVV 309 (519)
Q Consensus 237 ~aE~lv~~~-----~~~lp~~IvRPs~V~g~~~~p~-~gw~~~~-~~~~~~i~~~~~g~~~~~~~~~~~~~d~vpVDdva 309 (519)
..+.+.+.. ..++.+..+.||.|.++..... ....... .............. ........+..++|+|
T Consensus 163 a~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~r~~~pedvA 237 (267)
T 3t4x_A 163 MQLSLSRSLAELTTGTNVTVNTIMPGSTLTEGVETMLNSLYPNEQLTIEEAEKRFMKEN-----RPTSIIQRLIRPEEIA 237 (267)
T ss_dssp HHHHHHHHHHHHTTTSEEEEEEEEECCBCCHHHHHHHHHSSTTSCCCHHHHHHHHHHHH-----CTTCSSCSCBCTHHHH
T ss_pred HHHHHHHHHHHHhCCCCeEEEEEeCCeecCccHHHHHhhcCcccCCCHHHHHHHHhhcc-----CCcccccCccCHHHHH
Confidence 999988765 3469999999999876532100 0000000 00001111110000 0111234678999999
Q ss_pred HHHHHHHHHhccCCCCCcEEEecCCCCCc
Q 010075 310 NAMIVAMVAHAKQPSDANIYHVGSSLRNP 338 (519)
Q Consensus 310 ~aii~a~~~~~~~~~~~~iyni~s~~~~~ 338 (519)
++++.++..... .-.++++++.+|...+
T Consensus 238 ~~v~fL~s~~~~-~itG~~i~vdGG~~~s 265 (267)
T 3t4x_A 238 HLVTFLSSPLSS-AINGSALRIDGGLVRS 265 (267)
T ss_dssp HHHHHHHSGGGT-TCCSCEEEESTTCSCS
T ss_pred HHHHHHcCcccc-CccCCeEEECCCcccc
Confidence 999998864322 2247899999886544
|
| >1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.74 E-value=6.9e-17 Score=161.46 Aligned_cols=231 Identities=13% Similarity=0.139 Sum_probs=150.8
Q ss_pred cCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 010075 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (519)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (519)
++||+|+||||+|+||+++++.|++.| .+|+++.|+... .+++.++ +.+..+ ...++.+
T Consensus 24 l~~k~vlVTGas~gIG~aia~~L~~~G---~~V~~~~r~~~~---~~~~~~~---------l~~~~~------~~~~~~~ 82 (297)
T 1xhl_A 24 FSGKSVIITGSSNGIGRSAAVIFAKEG---AQVTITGRNEDR---LEETKQQ---------ILKAGV------PAEKINA 82 (297)
T ss_dssp CTTCEEEETTCSSHHHHHHHHHHHHTT---CEEEEEESCHHH---HHHHHHH---------HHHTTC------CGGGEEE
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCC---CEEEEEeCCHHH---HHHHHHH---------HHhcCC------CCceEEE
Confidence 578999999999999999999999998 678999886421 1222111 111100 0126889
Q ss_pred EeccCCCCCCCCChhhhHHHHh-------cCccEEEEcCccCC-----c----cccHHHHHHHhHHHHHHHHHHHHhc--
Q 010075 90 VPGDISSEDLGLKDSNLKEELW-------NELDIMVNSAAITK-----F----DERYDVAFGINTLGVIHLVNFAKKC-- 151 (519)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~-------~~vdiViH~Aa~v~-----f----~~~~~~~~~~Nv~gt~~ll~~a~~~-- 151 (519)
+.+|++++ +..+.++ .++|+|||+||... + .+.++..+++|+.|+.++++.+.+.
T Consensus 83 ~~~Dv~d~-------~~v~~~~~~~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~ 155 (297)
T 1xhl_A 83 VVADVTEA-------SGQDDIINTTLAKFGKIDILVNNAGANLADGTANTDQPVELYQKTFKLNFQAVIEMTQKTKEHLI 155 (297)
T ss_dssp EECCTTSH-------HHHHHHHHHHHHHHSCCCEEEECCCCCCCCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHH
T ss_pred EecCCCCH-------HHHHHHHHHHHHhcCCCCEEEECCCcCcCCCCccccCCHHHHHHHHhHhhHHHHHHHHHHHHHHH
Confidence 99999953 3223333 37999999999653 2 2457788999999999999887653
Q ss_pred -cCCceEEEEecceeecCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcH
Q 010075 152 -VKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNT 230 (519)
Q Consensus 152 -~~l~~~V~vSTa~v~~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~ 230 (519)
.+ .++|++||...+.... .....
T Consensus 156 ~~~-g~IV~isS~~~~~~~~-------------------------------------------------------~~~~~ 179 (297)
T 1xhl_A 156 KTK-GEIVNVSSIVAGPQAH-------------------------------------------------------SGYPY 179 (297)
T ss_dssp HTT-CEEEEECCGGGSSSCC-------------------------------------------------------TTSHH
T ss_pred hcC-CEEEEEcCchhccCCC-------------------------------------------------------CCcch
Confidence 23 7999999986543210 12357
Q ss_pred HHHHHHHHHHHHHHh-----hcCCcEEEEecCccccCCCCCCCccccccc-ccHHHHHHhhcCCceeeccCCCceeeeee
Q 010075 231 YVFTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLK-TINTLFVASAQGNLRCLVGETKVIMDVIP 304 (519)
Q Consensus 231 Y~~sK~~aE~lv~~~-----~~~lp~~IvRPs~V~g~~~~p~~gw~~~~~-~~~~~i~~~~~g~~~~~~~~~~~~~d~vp 304 (519)
|+.||+..+.+.+.. ..++++.+++||.|.++........ .... ............ .....+..
T Consensus 180 Y~asKaa~~~l~~~la~el~~~gI~v~~v~PG~v~T~~~~~~~~~-~~~~~~~~~~~~~~~~~---------~p~~r~~~ 249 (297)
T 1xhl_A 180 YACAKAALDQYTRCTAIDLIQHGVRVNSVSPGAVATGFMGAMGLP-ETASDKLYSFIGSRKEC---------IPVGHCGK 249 (297)
T ss_dssp HHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSSHHHHTTCC-HHHHHHHHHHHHHCTTT---------CTTSSCBC
T ss_pred HHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCCCcCccccccccc-cccccchHHHHHHHHhc---------CCCCCCcC
Confidence 999999999888764 3589999999999987642111000 0000 000111111111 11234788
Q ss_pred HHHHHHHHHHHHHHh-ccCCCCCcEEEecCCC
Q 010075 305 VDMVVNAMIVAMVAH-AKQPSDANIYHVGSSL 335 (519)
Q Consensus 305 VDdva~aii~a~~~~-~~~~~~~~iyni~s~~ 335 (519)
++|+|++++.++... .. .-.++++++.+|.
T Consensus 250 pedvA~~v~~l~s~~~~~-~itG~~i~vdGG~ 280 (297)
T 1xhl_A 250 PEEIANIIVFLADRNLSS-YIIGQSIVADGGS 280 (297)
T ss_dssp HHHHHHHHHHHHCHHHHT-TCCSCEEEESTTG
T ss_pred HHHHHHHHHHHhCCcccC-CccCcEEEECCCc
Confidence 999999999988643 22 1236899998873
|
| >3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis} | Back alignment and structure |
|---|
Probab=99.74 E-value=2.3e-17 Score=164.32 Aligned_cols=228 Identities=14% Similarity=0.096 Sum_probs=149.6
Q ss_pred cCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 010075 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (519)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (519)
++||+|+||||||+||++++++|++.| .+|+++.|+.... +.+. ++ ...++.+
T Consensus 14 l~gk~vlVTGas~gIG~~~a~~L~~~G---~~V~~~~r~~~~~---~~~~-------------~~--------~~~~~~~ 66 (291)
T 3rd5_A 14 FAQRTVVITGANSGLGAVTARELARRG---ATVIMAVRDTRKG---EAAA-------------RT--------MAGQVEV 66 (291)
T ss_dssp CTTCEEEEECCSSHHHHHHHHHHHHTT---CEEEEEESCHHHH---HHHH-------------TT--------SSSEEEE
T ss_pred CCCCEEEEeCCCChHHHHHHHHHHHCC---CEEEEEECCHHHH---HHHH-------------HH--------hcCCeeE
Confidence 679999999999999999999999998 6889999874221 1111 11 1357899
Q ss_pred EeccCCCCCCCCChhhhHHHHhc---CccEEEEcCccCCc-----cccHHHHHHHhHHHHHHHHHHHHhccCCceEEEEe
Q 010075 90 VPGDISSEDLGLKDSNLKEELWN---ELDIMVNSAAITKF-----DERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVS 161 (519)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~~---~vdiViH~Aa~v~f-----~~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V~vS 161 (519)
+.+|+++ .+..+.+.+ ++|++||+||.... .+.++..+++|+.|+.++++++... ..+++|++|
T Consensus 67 ~~~Dl~d-------~~~v~~~~~~~~~iD~lv~nAg~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~-~~~riv~is 138 (291)
T 3rd5_A 67 RELDLQD-------LSSVRRFADGVSGADVLINNAGIMAVPYALTVDGFESQIGTNHLGHFALTNLLLPR-LTDRVVTVS 138 (291)
T ss_dssp EECCTTC-------HHHHHHHHHTCCCEEEEEECCCCCSCCCCBCTTSCBHHHHHHTHHHHHHHHHHGGG-EEEEEEEEC
T ss_pred EEcCCCC-------HHHHHHHHHhcCCCCEEEECCcCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHH-HHhheeEee
Confidence 9999995 333445554 68999999997542 3567888999999999999999875 456999999
Q ss_pred cceeecCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcHHHHHHHHHHHH
Q 010075 162 TAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEML 241 (519)
Q Consensus 162 Ta~v~~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~Y~~sK~~aE~l 241 (519)
|...+..... ........ ....+...|+.||+..+.+
T Consensus 139 S~~~~~~~~~---~~~~~~~~----------------------------------------~~~~~~~~Y~~sK~a~~~~ 175 (291)
T 3rd5_A 139 SMAHWPGRIN---LEDLNWRS----------------------------------------RRYSPWLAYSQSKLANLLF 175 (291)
T ss_dssp CGGGTTCCCC---SSCTTCSS----------------------------------------SCCCHHHHHHHHHHHHHHH
T ss_pred chhhccCCCC---cccccccc----------------------------------------cCCCCcchHHHHHHHHHHH
Confidence 9876543210 00000000 0012235799999999988
Q ss_pred HHHh-----hcC--CcEEEEecCccccCCCCCCCcccccccccHHHHHHhhcCCceeeccCCCceeeeeeHHHHHHHHHH
Q 010075 242 MQQS-----KEN--LSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMIV 314 (519)
Q Consensus 242 v~~~-----~~~--lp~~IvRPs~V~g~~~~p~~gw~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~d~vpVDdva~aii~ 314 (519)
.+.. ..+ +.+..++||.|.++.....+.. ....... .+ ..+-..+.+++|++++.
T Consensus 176 ~~~la~e~~~~g~~i~v~~v~PG~v~T~~~~~~~~~---------~~~~~~~-----~~----~~~~~~~~~~~A~~~~~ 237 (291)
T 3rd5_A 176 TSELQRRLTAAGSPLRALAAHPGYSHTNLQGASGRK---------LGDALMS-----AA----TRVVATDADFGARQTLY 237 (291)
T ss_dssp HHHHHHHHHHTTCCCEEEEECCSGGGSCC--------------------------------------CHHHHHHHHHHHH
T ss_pred HHHHHHHHhhCCCCEEEEEeeCCCCccccccccchH---------HHHHHHH-----HH----HHHHhCCHHHHHHHHHH
Confidence 8754 234 9999999999977654321110 0000000 00 11112458999999999
Q ss_pred HHHHhccCCCCCcEEEecCCCC
Q 010075 315 AMVAHAKQPSDANIYHVGSSLR 336 (519)
Q Consensus 315 a~~~~~~~~~~~~iyni~s~~~ 336 (519)
++... ...++++++.+|..
T Consensus 238 l~~~~---~~~G~~~~vdgG~~ 256 (291)
T 3rd5_A 238 AASQD---LPGDSFVGPRFGYL 256 (291)
T ss_dssp HHHSC---CCTTCEEEETTSSS
T ss_pred HHcCC---CCCCceeCCccccc
Confidence 98753 22478888876533
|
| >3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} SCOP: c.2.1.0 PDB: 3uwr_A* | Back alignment and structure |
|---|
Probab=99.74 E-value=3.5e-16 Score=155.29 Aligned_cols=240 Identities=15% Similarity=0.102 Sum_probs=154.5
Q ss_pred hhhhcCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcc----------cHHHHHHHHHhhhhhHHHHHhhh
Q 010075 6 VVEFLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADID----------SAALRFQNEVLAKDVFNVLKEKW 75 (519)
Q Consensus 6 i~~~~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~----------~~~~rl~~~~~~~~~f~~l~~~~ 75 (519)
+..-++||+++||||+|+||+++++.|++.| .+|+++.|++... ...+++.+ + .+.++.
T Consensus 5 m~~~l~~k~~lVTGas~gIG~aia~~la~~G---~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-----~~~~~~-- 73 (286)
T 3uve_A 5 MTGRVEGKVAFVTGAARGQGRSHAVRLAQEG---ADIIAVDICKPIRAGVVDTAIPASTPEDLAE-T-----ADLVKG-- 73 (286)
T ss_dssp -CCTTTTCEEEEESTTSHHHHHHHHHHHHTT---CEEEEEECCSCSBTTBCCCSSCCCCHHHHHH-H-----HHHHHT--
T ss_pred CCcccCCCEEEEeCCCchHHHHHHHHHHHCC---CeEEEEeccccccccccccccccCCHHHHHH-H-----HHHHhh--
Confidence 3445789999999999999999999999999 6788988873211 01122221 0 011111
Q ss_pred ccccccccCCceEEEeccCCCCCCCCChhhhHHHHh-------cCccEEEEcCccCCc--------cccHHHHHHHhHHH
Q 010075 76 GTRLNSFISEKITFVPGDISSEDLGLKDSNLKEELW-------NELDIMVNSAAITKF--------DERYDVAFGINTLG 140 (519)
Q Consensus 76 ~~~~~~~~~~~v~~v~gDl~~~~lgls~~~~~~~l~-------~~vdiViH~Aa~v~f--------~~~~~~~~~~Nv~g 140 (519)
...++.++.+|++++ +..+.++ .++|++||+||.... .+.++..+++|+.|
T Consensus 74 -------~~~~~~~~~~Dv~~~-------~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g 139 (286)
T 3uve_A 74 -------HNRRIVTAEVDVRDY-------DALKAAVDSGVEQLGRLDIIVANAGIGNGGDTLDKTSEEDWTEMIDINLAG 139 (286)
T ss_dssp -------TTCCEEEEECCTTCH-------HHHHHHHHHHHHHHSCCCEEEECCCCCCCCSCGGGCCHHHHHHHHHHHTHH
T ss_pred -------cCCceEEEEcCCCCH-------HHHHHHHHHHHHHhCCCCEEEECCcccCCCCccccCCHHHHHHHHHHhhHH
Confidence 135789999999963 3233333 379999999997532 24677889999999
Q ss_pred HHHHHHHHHhc----cCCceEEEEecceeecCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhh
Q 010075 141 VIHLVNFAKKC----VKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKN 216 (519)
Q Consensus 141 t~~ll~~a~~~----~~l~~~V~vSTa~v~~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 216 (519)
+.++++.+... +.-.++|++||...+...
T Consensus 140 ~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~----------------------------------------------- 172 (286)
T 3uve_A 140 VWKTVKAGVPHMIAGGRGGSIILTSSVGGLKAY----------------------------------------------- 172 (286)
T ss_dssp HHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCC-----------------------------------------------
T ss_pred HHHHHHHHHHHHHhCCCCcEEEEECchhhccCC-----------------------------------------------
Confidence 99999887542 124689999997654211
Q ss_pred ccccccccCCCCcHHHHHHHHHHHHHHHh-----hcCCcEEEEecCccccCCCCCCCc---ccccc--cccHHHHHHhhc
Q 010075 217 LGTERAKLHGWPNTYVFTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPG---WVEDL--KTINTLFVASAQ 286 (519)
Q Consensus 217 lg~~~~~~~~~~n~Y~~sK~~aE~lv~~~-----~~~lp~~IvRPs~V~g~~~~p~~g---w~~~~--~~~~~~i~~~~~ 286 (519)
.....|+.||+..+.+.+.. ..++.+..+.||.|.++....... +.... ..+... .....
T Consensus 173 ---------~~~~~Y~asKaa~~~~~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 242 (286)
T 3uve_A 173 ---------PHTGHYVAAKHGVVGLMRAFGVELGQHMIRVNSVHPTHVKTPMLHNEGTFKMFRPDLENPGPDDM-APICQ 242 (286)
T ss_dssp ---------TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSSTTTSSHHHHHHHCTTSSSCCHHHH-HHHHH
T ss_pred ---------CCccHHHHHHHHHHHHHHHHHHHhcccCeEEEEEecCcccCCcccccchhhhccccccccchhhH-HHHHH
Confidence 22357999999999888754 357999999999998865421100 00000 000000 00000
Q ss_pred CCceeeccCCCceeeeeeHHHHHHHHHHHHHHhccCCCCCcEEEecCCC
Q 010075 287 GNLRCLVGETKVIMDVIPVDMVVNAMIVAMVAHAKQPSDANIYHVGSSL 335 (519)
Q Consensus 287 g~~~~~~~~~~~~~d~vpVDdva~aii~a~~~~~~~~~~~~iyni~s~~ 335 (519)
...... ..+...+|+|++++.++..... --.++++++.+|.
T Consensus 243 ------~~~~~p-~r~~~p~dvA~~v~fL~s~~a~-~itG~~i~vdGG~ 283 (286)
T 3uve_A 243 ------MFHTLP-IPWVEPIDISNAVLFFASDEAR-YITGVTLPIDAGS 283 (286)
T ss_dssp ------TTCSSS-CSCBCHHHHHHHHHHHHSGGGT-TCCSCEEEESTTG
T ss_pred ------hhhccC-CCcCCHHHHHHHHHHHcCcccc-CCcCCEEeECCcc
Confidence 001111 4578899999999998864332 2247899998873
|
| >3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.74 E-value=1.1e-16 Score=157.56 Aligned_cols=221 Identities=13% Similarity=0.103 Sum_probs=144.8
Q ss_pred cCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 010075 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (519)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (519)
++||+++||||+|+||+++++.|++.| .+|++..+.... ..+.+.+++ +. ...++.+
T Consensus 25 ~~~k~~lVTGas~GIG~aia~~la~~G---~~Vv~~~~~~~~--~~~~~~~~~---------~~---------~~~~~~~ 81 (267)
T 3u5t_A 25 ETNKVAIVTGASRGIGAAIAARLASDG---FTVVINYAGKAA--AAEEVAGKI---------EA---------AGGKALT 81 (267)
T ss_dssp --CCEEEEESCSSHHHHHHHHHHHHHT---CEEEEEESSCSH--HHHHHHHHH---------HH---------TTCCEEE
T ss_pred cCCCEEEEeCCCCHHHHHHHHHHHHCC---CEEEEEcCCCHH--HHHHHHHHH---------Hh---------cCCeEEE
Confidence 468999999999999999999999999 567776554332 122222111 11 1257889
Q ss_pred EeccCCCCCCCCChhhhHHHHh-------cCccEEEEcCccCCc-------cccHHHHHHHhHHHHHHHHHHHHh-ccCC
Q 010075 90 VPGDISSEDLGLKDSNLKEELW-------NELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKK-CVKL 154 (519)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~-------~~vdiViH~Aa~v~f-------~~~~~~~~~~Nv~gt~~ll~~a~~-~~~l 154 (519)
+.+|++++ +..+.++ .++|++||+||.... .+.++..+++|+.|+.++++.+.+ +.+-
T Consensus 82 ~~~Dl~~~-------~~v~~~~~~~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~ 154 (267)
T 3u5t_A 82 AQADVSDP-------AAVRRLFATAEEAFGGVDVLVNNAGIMPLTTIAETGDAVFDRVIAVNLKGTFNTLREAAQRLRVG 154 (267)
T ss_dssp EECCTTCH-------HHHHHHHHHHHHHHSCEEEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEE
T ss_pred EEcCCCCH-------HHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhC
Confidence 99999963 3233333 379999999997642 245788899999999999988765 3333
Q ss_pred ceEEEEecceeecCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcHHHHH
Q 010075 155 KVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFT 234 (519)
Q Consensus 155 ~~~V~vSTa~v~~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~Y~~s 234 (519)
.++|++||....... .....|+.|
T Consensus 155 g~iv~isS~~~~~~~--------------------------------------------------------~~~~~Y~as 178 (267)
T 3u5t_A 155 GRIINMSTSQVGLLH--------------------------------------------------------PSYGIYAAA 178 (267)
T ss_dssp EEEEEECCTHHHHCC--------------------------------------------------------TTCHHHHHH
T ss_pred CeEEEEeChhhccCC--------------------------------------------------------CCchHHHHH
Confidence 589999987553211 123579999
Q ss_pred HHHHHHHHHHh-----hcCCcEEEEecCccccCCCCCCCcccccccccHHHHHHhhcCCceeeccCCCceeeeeeHHHHH
Q 010075 235 KTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVV 309 (519)
Q Consensus 235 K~~aE~lv~~~-----~~~lp~~IvRPs~V~g~~~~p~~gw~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~d~vpVDdva 309 (519)
|+..+.+.+.. ..++.+..+.||.|..+..... . ......... .......+..++|+|
T Consensus 179 Kaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~--~------~~~~~~~~~---------~~~p~~r~~~pedvA 241 (267)
T 3u5t_A 179 KAGVEAMTHVLSKELRGRDITVNAVAPGPTATDLFLEG--K------SDEVRDRFA---------KLAPLERLGTPQDIA 241 (267)
T ss_dssp HHHHHHHHHHHHHHTTTSCCEEEEEEECCBC-------------------CHHHHH---------TSSTTCSCBCHHHHH
T ss_pred HHHHHHHHHHHHHHhhhhCCEEEEEEECCCcCcccccc--C------CHHHHHHHH---------hcCCCCCCcCHHHHH
Confidence 99999998865 3479999999999977543110 0 000011111 111223467899999
Q ss_pred HHHHHHHHHhccCCCCCcEEEecCC
Q 010075 310 NAMIVAMVAHAKQPSDANIYHVGSS 334 (519)
Q Consensus 310 ~aii~a~~~~~~~~~~~~iyni~s~ 334 (519)
++++.++.... ..-.++++++.+|
T Consensus 242 ~~v~~L~s~~~-~~itG~~i~vdGG 265 (267)
T 3u5t_A 242 GAVAFLAGPDG-AWVNGQVLRANGG 265 (267)
T ss_dssp HHHHHHHSTTT-TTCCSEEEEESSS
T ss_pred HHHHHHhCccc-cCccCCEEEeCCC
Confidence 99998885332 2224789998776
|
| >3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 3uic_A* 2jjy_A* | Back alignment and structure |
|---|
Probab=99.74 E-value=2.9e-17 Score=162.74 Aligned_cols=220 Identities=15% Similarity=0.158 Sum_probs=152.0
Q ss_pred cCCCEEEEeCCccH--HHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCce
Q 010075 10 LENKTILVSGVTGF--VAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKI 87 (519)
Q Consensus 10 ~~~k~VlITGaTGF--lG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v 87 (519)
++||+|+||||||+ ||+++++.|++.| .+|+++.|+. .....+++ .++ ..++
T Consensus 24 l~~k~vlVTGasg~~GIG~~ia~~l~~~G---~~V~~~~r~~-~~~~~~~l-------------~~~---------~~~~ 77 (280)
T 3nrc_A 24 LAGKKILITGLLSNKSIAYGIAKAMHREG---AELAFTYVGQ-FKDRVEKL-------------CAE---------FNPA 77 (280)
T ss_dssp TTTCEEEECCCCSTTCHHHHHHHHHHHTT---CEEEEEECTT-CHHHHHHH-------------HGG---------GCCS
T ss_pred cCCCEEEEECCCCCCCHHHHHHHHHHHcC---CEEEEeeCch-HHHHHHHH-------------HHh---------cCCc
Confidence 67899999999977 9999999999998 6789999986 22222222 111 1357
Q ss_pred EEEeccCCCCCCCCChhhhHHHHh-------cCccEEEEcCccCCc------------cccHHHHHHHhHHHHHHHHHHH
Q 010075 88 TFVPGDISSEDLGLKDSNLKEELW-------NELDIMVNSAAITKF------------DERYDVAFGINTLGVIHLVNFA 148 (519)
Q Consensus 88 ~~v~gDl~~~~lgls~~~~~~~l~-------~~vdiViH~Aa~v~f------------~~~~~~~~~~Nv~gt~~ll~~a 148 (519)
.++.+|++++ +..+.++ .++|+|||+||.... .+.++..+++|+.|+.++++.+
T Consensus 78 ~~~~~Dl~~~-------~~v~~~~~~~~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~ 150 (280)
T 3nrc_A 78 AVLPCDVISD-------QEIKDLFVELGKVWDGLDAIVHSIAFAPRDQLEGNFIDCVTREGFSIAHDISAYSFAALAKEG 150 (280)
T ss_dssp EEEECCTTCH-------HHHHHHHHHHHHHCSSCCEEEECCCCCCGGGSSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHH
T ss_pred eEEEeecCCH-------HHHHHHHHHHHHHcCCCCEEEECCccCCCcccCCccccccCHHHHHHHHHHHHHHHHHHHHHH
Confidence 8999999963 2222333 368999999998642 2456778999999999999988
Q ss_pred Hhc--cCCceEEEEecceeecCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCC
Q 010075 149 KKC--VKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHG 226 (519)
Q Consensus 149 ~~~--~~l~~~V~vSTa~v~~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~ 226 (519)
... ++-.++|++||...+... .
T Consensus 151 ~~~~~~~~g~iv~isS~~~~~~~--------------------------------------------------------~ 174 (280)
T 3nrc_A 151 RSMMKNRNASMVALTYIGAEKAM--------------------------------------------------------P 174 (280)
T ss_dssp HHHHTTTTCEEEEEECGGGTSCC--------------------------------------------------------T
T ss_pred HHHhhcCCCeEEEEeccccccCC--------------------------------------------------------C
Confidence 653 234689999997654211 2
Q ss_pred CCcHHHHHHHHHHHHHHHh-----hcCCcEEEEecCccccCCCCCCCcccccccccHHHHHHhhcCCceeeccCCCceee
Q 010075 227 WPNTYVFTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMD 301 (519)
Q Consensus 227 ~~n~Y~~sK~~aE~lv~~~-----~~~lp~~IvRPs~V~g~~~~p~~gw~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~d 301 (519)
....|+.||+..+.+++.. ..++.+..++||.|.++.....+. ............ ....
T Consensus 175 ~~~~Y~asKaal~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~-------~~~~~~~~~~~~---------p~~~ 238 (280)
T 3nrc_A 175 SYNTMGVAKASLEATVRYTALALGEDGIKVNAVSAGPIKTLAASGISN-------FKKMLDYNAMVS---------PLKK 238 (280)
T ss_dssp TTHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCCCCSGGGGCTT-------HHHHHHHHHHHS---------TTCS
T ss_pred CchhhHHHHHHHHHHHHHHHHHHHHcCcEEEEEeeccccchhhhcCcc-------hHHHHHHHHhcC---------CCCC
Confidence 2457999999999888754 357999999999998865432211 111221111111 1123
Q ss_pred eeeHHHHHHHHHHHHHHhccCCCCCcEEEecCCC
Q 010075 302 VIPVDMVVNAMIVAMVAHAKQPSDANIYHVGSSL 335 (519)
Q Consensus 302 ~vpVDdva~aii~a~~~~~~~~~~~~iyni~s~~ 335 (519)
+..++|+|++++.++..... .-.++++++.+|.
T Consensus 239 ~~~pedvA~~v~~l~s~~~~-~~tG~~i~vdgG~ 271 (280)
T 3nrc_A 239 NVDIMEVGNTVAFLCSDMAT-GITGEVVHVDAGY 271 (280)
T ss_dssp CCCHHHHHHHHHHTTSGGGT-TCCSCEEEESTTG
T ss_pred CCCHHHHHHHHHHHhCcccC-CcCCcEEEECCCc
Confidence 57789999999998864322 2247899998873
|
| >3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A | Back alignment and structure |
|---|
Probab=99.74 E-value=4.1e-17 Score=160.78 Aligned_cols=233 Identities=15% Similarity=0.130 Sum_probs=152.3
Q ss_pred hhhcCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCc
Q 010075 7 VEFLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEK 86 (519)
Q Consensus 7 ~~~~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~ 86 (519)
..-++||+++||||+|+||++++++|++.| .+|+++.|.... ..+.+.+++ ++ ...+
T Consensus 13 ~~~l~~k~~lVTGas~gIG~aia~~l~~~G---~~V~~~~~~~~~--~~~~~~~~~---------~~---------~~~~ 69 (270)
T 3is3_A 13 PGRLDGKVALVTGSGRGIGAAVAVHLGRLG---AKVVVNYANSTK--DAEKVVSEI---------KA---------LGSD 69 (270)
T ss_dssp TTCCTTCEEEESCTTSHHHHHHHHHHHHTT---CEEEEEESSCHH--HHHHHHHHH---------HH---------TTCC
T ss_pred CCCcCCCEEEEECCCchHHHHHHHHHHHCC---CEEEEEcCCCHH--HHHHHHHHH---------Hh---------cCCc
Confidence 344789999999999999999999999998 677877765321 122222111 11 1357
Q ss_pred eEEEeccCCCCCCCCChhhhHHHHh-------cCccEEEEcCccCCc-------cccHHHHHHHhHHHHHHHHHHHHhc-
Q 010075 87 ITFVPGDISSEDLGLKDSNLKEELW-------NELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKC- 151 (519)
Q Consensus 87 v~~v~gDl~~~~lgls~~~~~~~l~-------~~vdiViH~Aa~v~f-------~~~~~~~~~~Nv~gt~~ll~~a~~~- 151 (519)
+.++.+|++++ +..+.++ .++|++||+||.... .+.++..+++|+.|+.++++.+.+.
T Consensus 70 ~~~~~~Dv~~~-------~~v~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~ 142 (270)
T 3is3_A 70 AIAIKADIRQV-------PEIVKLFDQAVAHFGHLDIAVSNSGVVSFGHLKDVTEEEFDRVFSLNTRGQFFVAREAYRHL 142 (270)
T ss_dssp EEEEECCTTSH-------HHHHHHHHHHHHHHSCCCEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHC
T ss_pred EEEEEcCCCCH-------HHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHH
Confidence 89999999963 2223333 379999999998643 2567888999999999999988763
Q ss_pred cCCceEEEEecceeecCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcHH
Q 010075 152 VKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTY 231 (519)
Q Consensus 152 ~~l~~~V~vSTa~v~~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~Y 231 (519)
.+-.++|++||....... ......|
T Consensus 143 ~~~g~iv~isS~~~~~~~-------------------------------------------------------~~~~~~Y 167 (270)
T 3is3_A 143 TEGGRIVLTSSNTSKDFS-------------------------------------------------------VPKHSLY 167 (270)
T ss_dssp CTTCEEEEECCTTTTTCC-------------------------------------------------------CTTCHHH
T ss_pred hcCCeEEEEeCchhccCC-------------------------------------------------------CCCCchh
Confidence 233589999997521100 0234579
Q ss_pred HHHHHHHHHHHHHh-----hcCCcEEEEecCccccCCCCCCC-cccccc--cccHHHHHHhhcCCceeeccCCCceeeee
Q 010075 232 VFTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFP-GWVEDL--KTINTLFVASAQGNLRCLVGETKVIMDVI 303 (519)
Q Consensus 232 ~~sK~~aE~lv~~~-----~~~lp~~IvRPs~V~g~~~~p~~-gw~~~~--~~~~~~i~~~~~g~~~~~~~~~~~~~d~v 303 (519)
+.||+..+.+.+.. ..++++..++||.|.++...... .+.... ............ ......+.
T Consensus 168 ~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~p~~r~~ 238 (270)
T 3is3_A 168 SGSKGAVDSFVRIFSKDCGDKKITVNAVAPGGTVTDMFHEVSHHYIPNGTSYTAEQRQQMAAH---------ASPLHRNG 238 (270)
T ss_dssp HHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSTTHHHHGGGGSTTGGGSCHHHHHHHHHH---------HSTTCSCB
T ss_pred HHHHHHHHHHHHHHHHHhcccCeEEEEEEeCCccChhhhhhhhhccccccccchHHHHHHHHh---------cCCCCCCC
Confidence 99999999988765 35899999999999876532100 000000 001111111111 11223457
Q ss_pred eHHHHHHHHHHHHHHhccCCCCCcEEEecCC
Q 010075 304 PVDMVVNAMIVAMVAHAKQPSDANIYHVGSS 334 (519)
Q Consensus 304 pVDdva~aii~a~~~~~~~~~~~~iyni~s~ 334 (519)
..+|+|++++.++..... --.++++++.+|
T Consensus 239 ~p~dvA~~v~~L~s~~~~-~itG~~i~vdGG 268 (270)
T 3is3_A 239 WPQDVANVVGFLVSKEGE-WVNGKVLTLDGG 268 (270)
T ss_dssp CHHHHHHHHHHHTSGGGT-TCCSCEEEESTT
T ss_pred CHHHHHHHHHHHcCCccC-CccCcEEEeCCC
Confidence 799999999998864322 224789999877
|
| >1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.74 E-value=1.5e-16 Score=154.33 Aligned_cols=214 Identities=14% Similarity=0.100 Sum_probs=146.4
Q ss_pred cCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 010075 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (519)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (519)
+++|+++||||||+||++++++|++.| .+|+++.|+... .+.+. ++ ..+.+
T Consensus 3 l~~k~vlVTGas~giG~~ia~~l~~~G---~~V~~~~r~~~~---~~~~~-------------~~----------~~~~~ 53 (245)
T 1uls_A 3 LKDKAVLITGAAHGIGRATLELFAKEG---ARLVACDIEEGP---LREAA-------------EA----------VGAHP 53 (245)
T ss_dssp TTTCEEEEESTTSHHHHHHHHHHHHTT---CEEEEEESCHHH---HHHHH-------------HT----------TTCEE
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCC---CEEEEEeCCHHH---HHHHH-------------HH----------cCCEE
Confidence 468999999999999999999999998 678898886321 11111 10 12678
Q ss_pred EeccCCCCCCCCChhhhHHHHh-------cCccEEEEcCccCCc-------cccHHHHHHHhHHHHHHHHHHHHhc---c
Q 010075 90 VPGDISSEDLGLKDSNLKEELW-------NELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKC---V 152 (519)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~-------~~vdiViH~Aa~v~f-------~~~~~~~~~~Nv~gt~~ll~~a~~~---~ 152 (519)
+.+|++++ +..+.++ .++|+|||+||.... .+.++..+++|+.|+.++++.+.+. .
T Consensus 54 ~~~D~~~~-------~~~~~~~~~~~~~~g~id~lvn~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~ 126 (245)
T 1uls_A 54 VVMDVADP-------ASVERGFAEALAHLGRLDGVVHYAGITRDNFHWKMPLEDWELVLRVNLTGSFLVAKAASEAMREK 126 (245)
T ss_dssp EECCTTCH-------HHHHHHHHHHHHHHSSCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTT
T ss_pred EEecCCCH-------HHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc
Confidence 89999963 2222333 369999999997542 2467788999999999998887543 2
Q ss_pred CCceEEEEecceeecCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcHHH
Q 010075 153 KLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYV 232 (519)
Q Consensus 153 ~l~~~V~vSTa~v~~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~Y~ 232 (519)
+..++|++||...++. .....|+
T Consensus 127 ~~g~iv~isS~~~~~~---------------------------------------------------------~~~~~Y~ 149 (245)
T 1uls_A 127 NPGSIVLTASRVYLGN---------------------------------------------------------LGQANYA 149 (245)
T ss_dssp CCEEEEEECCGGGGCC---------------------------------------------------------TTCHHHH
T ss_pred CCCEEEEEccchhcCC---------------------------------------------------------CCchhHH
Confidence 4679999999862221 1235799
Q ss_pred HHHHHHHHHHHHh-----hcCCcEEEEecCccccCCCCCCCcccccccccHHHHHHhhcCCceeeccCCCceeeeeeHHH
Q 010075 233 FTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDM 307 (519)
Q Consensus 233 ~sK~~aE~lv~~~-----~~~lp~~IvRPs~V~g~~~~p~~gw~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~d~vpVDd 307 (519)
.||+..+.+.+.. ..++++.+++||.|.++.....+ .......... .+ ...++..+|
T Consensus 150 asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~---------~~~~~~~~~~----~p-----~~~~~~~~d 211 (245)
T 1uls_A 150 ASMAGVVGLTRTLALELGRWGIRVNTLAPGFIETRMTAKVP---------EKVREKAIAA----TP-----LGRAGKPLE 211 (245)
T ss_dssp HHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTTSSSC---------HHHHHHHHHT----CT-----TCSCBCHHH
T ss_pred HHHHHHHHHHHHHHHHHhHhCeEEEEEEeCcCcCcchhhcC---------HHHHHHHHhh----CC-----CCCCcCHHH
Confidence 9999888887654 35899999999999776432111 1111111111 01 113678999
Q ss_pred HHHHHHHHHHHhccCCCCCcEEEecCCC
Q 010075 308 VVNAMIVAMVAHAKQPSDANIYHVGSSL 335 (519)
Q Consensus 308 va~aii~a~~~~~~~~~~~~iyni~s~~ 335 (519)
+|++++.++..... .-.++++++.+|.
T Consensus 212 vA~~v~~l~s~~~~-~~tG~~~~vdgG~ 238 (245)
T 1uls_A 212 VAYAALFLLSDESS-FITGQVLFVDGGR 238 (245)
T ss_dssp HHHHHHHHHSGGGT-TCCSCEEEESTTT
T ss_pred HHHHHHHHhCchhc-CCcCCEEEECCCc
Confidence 99999998864322 2236889998774
|
| >3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A* | Back alignment and structure |
|---|
Probab=99.74 E-value=1.9e-16 Score=152.38 Aligned_cols=211 Identities=17% Similarity=0.200 Sum_probs=143.9
Q ss_pred CCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEE
Q 010075 11 ENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFV 90 (519)
Q Consensus 11 ~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v 90 (519)
++|+|+||||+|+||++++++|++.| .+|+++.|+... .+.+.++ +.+.. ..++.++
T Consensus 1 ~~k~vlITGas~gIG~~ia~~l~~~G---~~V~~~~r~~~~---~~~~~~~---------~~~~~--------~~~~~~~ 57 (235)
T 3l77_A 1 EMKVAVITGASRGIGEAIARALARDG---YALALGARSVDR---LEKIAHE---------LMQEQ--------GVEVFYH 57 (235)
T ss_dssp CCCEEEEESCSSHHHHHHHHHHHHTT---CEEEEEESCHHH---HHHHHHH---------HHHHH--------CCCEEEE
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCC---CEEEEEeCCHHH---HHHHHHH---------HHhhc--------CCeEEEE
Confidence 47899999999999999999999998 678888886422 1222111 11111 3678999
Q ss_pred eccCCCCCCCCChhhhHHHHhc-------CccEEEEcCccCCc-------cccHHHHHHHhHHHHHHHHHHHHhc--cCC
Q 010075 91 PGDISSEDLGLKDSNLKEELWN-------ELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKC--VKL 154 (519)
Q Consensus 91 ~gDl~~~~lgls~~~~~~~l~~-------~vdiViH~Aa~v~f-------~~~~~~~~~~Nv~gt~~ll~~a~~~--~~l 154 (519)
.+|+++ .+..+.+++ ++|++||+||.... .+.++..+++|+.|+.++++.+... ++-
T Consensus 58 ~~D~~~-------~~~v~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~ 130 (235)
T 3l77_A 58 HLDVSK-------AESVEEFSKKVLERFGDVDVVVANAGLGYFKRLEELSEEEFHEMIEVNLLGVWRTLKAFLDSLKRTG 130 (235)
T ss_dssp ECCTTC-------HHHHHHHCC-HHHHHSSCSEEEECCCCCCCCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT
T ss_pred EeccCC-------HHHHHHHHHHHHHhcCCCCEEEECCccccccCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcC
Confidence 999995 333334443 79999999997642 2567888999999999999987642 123
Q ss_pred ceEEEEecceeecCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcHHHHH
Q 010075 155 KVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFT 234 (519)
Q Consensus 155 ~~~V~vSTa~v~~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~Y~~s 234 (519)
.++|.+||....... .....|+.|
T Consensus 131 ~~ii~~sS~~~~~~~--------------------------------------------------------~~~~~Y~~s 154 (235)
T 3l77_A 131 GLALVTTSDVSARLI--------------------------------------------------------PYGGGYVST 154 (235)
T ss_dssp CEEEEECCGGGSSCC--------------------------------------------------------TTCHHHHHH
T ss_pred CcEEEEecchhcccC--------------------------------------------------------CCcchHHHH
Confidence 467777765433210 223579999
Q ss_pred HHHHHHHHHHh---hcCCcEEEEecCccccCCCCCCCcccccccccHHHHHHhhcCCceeeccCCCceeeeeeHHHHHHH
Q 010075 235 KTMGEMLMQQS---KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNA 311 (519)
Q Consensus 235 K~~aE~lv~~~---~~~lp~~IvRPs~V~g~~~~p~~gw~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~d~vpVDdva~a 311 (519)
|+..+.+.+.+ ..++.+..++||.|-.+.....++ ......++..+|+|++
T Consensus 155 Kaa~~~~~~~l~~~~~~i~v~~v~PG~v~T~~~~~~~~--------------------------~~~~~~~~~p~dva~~ 208 (235)
T 3l77_A 155 KWAARALVRTFQIENPDVRFFELRPGAVDTYFGGSKPG--------------------------KPKEKGYLKPDEIAEA 208 (235)
T ss_dssp HHHHHHHHHHHHHHCTTSEEEEEEECSBSSSTTTCCSC--------------------------CCGGGTCBCHHHHHHH
T ss_pred HHHHHHHHHHHhhcCCCeEEEEEeCCccccccccccCC--------------------------cccccCCCCHHHHHHH
Confidence 99999998875 458999999999987654322111 0011146789999999
Q ss_pred HHHHHHHhccCCCCCcEEEecCC
Q 010075 312 MIVAMVAHAKQPSDANIYHVGSS 334 (519)
Q Consensus 312 ii~a~~~~~~~~~~~~iyni~s~ 334 (519)
++.++...... ..+++.-...+
T Consensus 209 v~~l~~~~~~~-~~~~~~~~~~~ 230 (235)
T 3l77_A 209 VRCLLKLPKDV-RVEELMLRSVY 230 (235)
T ss_dssp HHHHHTSCTTC-CCCEEEECCTT
T ss_pred HHHHHcCCCCC-ccceEEEeecc
Confidence 99998754322 12444444443
|
| >3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile} | Back alignment and structure |
|---|
Probab=99.74 E-value=1.7e-16 Score=160.06 Aligned_cols=238 Identities=13% Similarity=0.100 Sum_probs=152.7
Q ss_pred hcCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCccc------HHHHHHHHHhhhhhHHHHHhhhccccccc
Q 010075 9 FLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDS------AALRFQNEVLAKDVFNVLKEKWGTRLNSF 82 (519)
Q Consensus 9 ~~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~------~~~rl~~~~~~~~~f~~l~~~~~~~~~~~ 82 (519)
-++||+|+||||+|+||+++++.|++.| .+|+++.|...... ..+++.+ . .+.+++
T Consensus 43 ~l~gk~~lVTGas~GIG~aia~~la~~G---~~Vv~~~~~~~~~~~~~~~~~~~~~~~-~-----~~~~~~--------- 104 (317)
T 3oec_A 43 RLQGKVAFITGAARGQGRTHAVRLAQDG---ADIVAIDLCRQQPNLDYAQGSPEELKE-T-----VRLVEE--------- 104 (317)
T ss_dssp TTTTCEEEESSCSSHHHHHHHHHHHHTT---CEEEEEECCCCCTTCCSCCCCHHHHHH-H-----HHHHHH---------
T ss_pred ccCCCEEEEeCCCcHHHHHHHHHHHHCC---CeEEEEecccccccccccccCHHHHHH-H-----HHHHHh---------
Confidence 3678999999999999999999999999 67888887632210 1222221 0 011111
Q ss_pred cCCceEEEeccCCCCCCCCChhhhHHHHh-------cCccEEEEcCccCCc-------cccHHHHHHHhHHHHHHHHHHH
Q 010075 83 ISEKITFVPGDISSEDLGLKDSNLKEELW-------NELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFA 148 (519)
Q Consensus 83 ~~~~v~~v~gDl~~~~lgls~~~~~~~l~-------~~vdiViH~Aa~v~f-------~~~~~~~~~~Nv~gt~~ll~~a 148 (519)
...++.++.+|++++ +..+.++ .++|++||+||.... .+.++..+++|+.|+..+++.+
T Consensus 105 ~~~~~~~~~~Dv~d~-------~~v~~~~~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~ 177 (317)
T 3oec_A 105 QGRRIIARQADVRDL-------ASLQAVVDEALAEFGHIDILVSNVGISNQGEVVSLTDQQWSDILQTNLIGAWHACRAV 177 (317)
T ss_dssp TTCCEEEEECCTTCH-------HHHHHHHHHHHHHHSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHH
T ss_pred cCCeEEEEECCCCCH-------HHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHH
Confidence 135789999999963 3223333 379999999997642 2567888999999999998887
Q ss_pred Hhc----cCCceEEEEecceeecCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhcccccccc
Q 010075 149 KKC----VKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKL 224 (519)
Q Consensus 149 ~~~----~~l~~~V~vSTa~v~~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~ 224 (519)
... +.-.++|++||...+...
T Consensus 178 ~~~m~~~~~~g~Iv~isS~~~~~~~------------------------------------------------------- 202 (317)
T 3oec_A 178 LPSMIERGQGGSVIFVSSTVGLRGA------------------------------------------------------- 202 (317)
T ss_dssp HHHHHHTCSCEEEEEECCGGGSSCC-------------------------------------------------------
T ss_pred HHHHHHcCCCCEEEEECcHHhcCCC-------------------------------------------------------
Confidence 542 224679999997654211
Q ss_pred CCCCcHHHHHHHHHHHHHHHh-----hcCCcEEEEecCccccCCCCCC---Cccccccccc-HHHHHHhhcCCceeeccC
Q 010075 225 HGWPNTYVFTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPF---PGWVEDLKTI-NTLFVASAQGNLRCLVGE 295 (519)
Q Consensus 225 ~~~~n~Y~~sK~~aE~lv~~~-----~~~lp~~IvRPs~V~g~~~~p~---~gw~~~~~~~-~~~i~~~~~g~~~~~~~~ 295 (519)
.....|+.||+..+.+.+.+ ..++++..++||.|.++..... ..+......+ ..-...... ..
T Consensus 203 -~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~ 274 (317)
T 3oec_A 203 -PGQSHYAASKHGVQGLMLSLANEVGRHNIRVNSVNPGAVNTEMALNEKLLKMFLPHLENPTREDAAELFS-------QL 274 (317)
T ss_dssp -TTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSHHHHCHHHHHHHCTTCSSCCHHHHHHHHT-------TT
T ss_pred -CCCcchHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCcccCccccchhhhhhhhhhccccchhHHHHHHh-------hh
Confidence 12357999999999888765 3489999999999987642100 0000000000 000000000 00
Q ss_pred CCceeeeeeHHHHHHHHHHHHHHhccCCCCCcEEEecCCC
Q 010075 296 TKVIMDVIPVDMVVNAMIVAMVAHAKQPSDANIYHVGSSL 335 (519)
Q Consensus 296 ~~~~~d~vpVDdva~aii~a~~~~~~~~~~~~iyni~s~~ 335 (519)
......++.++|||++++.++.... ..-.++++++.+|.
T Consensus 275 ~~~p~~~~~pedvA~av~fL~s~~a-~~itG~~i~vdGG~ 313 (317)
T 3oec_A 275 TLLPIPWVEPEDVSNAVAWLASDEA-RYIHGAAIPVDGGQ 313 (317)
T ss_dssp CSSSSSSBCHHHHHHHHHHHTSGGG-TTCCSCEEEESTTG
T ss_pred ccCCCCCCCHHHHHHHHHHHcCCcc-cCCCCCEEEECcch
Confidence 1111467899999999998886432 22247899998873
|
| >1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.74 E-value=1.4e-16 Score=156.67 Aligned_cols=224 Identities=14% Similarity=0.083 Sum_probs=149.5
Q ss_pred hhcCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCce
Q 010075 8 EFLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKI 87 (519)
Q Consensus 8 ~~~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v 87 (519)
..+++|+|+||||+|+||+++++.|++.| .+|+++.|+... .+.+.+ .+.+.. ..++
T Consensus 17 ~~l~~k~~lVTGas~gIG~~ia~~l~~~G---~~V~~~~r~~~~---~~~~~~---------~l~~~~--------~~~~ 73 (267)
T 1vl8_A 17 FDLRGRVALVTGGSRGLGFGIAQGLAEAG---CSVVVASRNLEE---ASEAAQ---------KLTEKY--------GVET 73 (267)
T ss_dssp CCCTTCEEEEETTTSHHHHHHHHHHHHTT---CEEEEEESCHHH---HHHHHH---------HHHHHH--------CCCE
T ss_pred cCCCCCEEEEECCCCHHHHHHHHHHHHCC---CEEEEEeCCHHH---HHHHHH---------HHHHhc--------CCeE
Confidence 44688999999999999999999999998 678999886421 111111 111111 2467
Q ss_pred EEEeccCCCCCCCCChhhhHHHHh-------cCccEEEEcCccCCc-------cccHHHHHHHhHHHHHHHHHHHHh-c-
Q 010075 88 TFVPGDISSEDLGLKDSNLKEELW-------NELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKK-C- 151 (519)
Q Consensus 88 ~~v~gDl~~~~lgls~~~~~~~l~-------~~vdiViH~Aa~v~f-------~~~~~~~~~~Nv~gt~~ll~~a~~-~- 151 (519)
.++.+|++++ +..+.++ .++|+|||+||.... .+.++..+++|+.|+.++++.+.. +
T Consensus 74 ~~~~~Dl~~~-------~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~ 146 (267)
T 1vl8_A 74 MAFRCDVSNY-------EEVKKLLEAVKEKFGKLDTVVNAAGINRRHPAEEFPLDEFRQVIEVNLFGTYYVCREAFSLLR 146 (267)
T ss_dssp EEEECCTTCH-------HHHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHT
T ss_pred EEEEcCCCCH-------HHHHHHHHHHHHHcCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHH
Confidence 8899999963 2223333 379999999997642 245778899999999999887743 1
Q ss_pred -cCCceEEEEeccee-ecCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCc
Q 010075 152 -VKLKVFVHVSTAYV-AGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPN 229 (519)
Q Consensus 152 -~~l~~~V~vSTa~v-~~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n 229 (519)
.+..++|++||..+ ... . ....
T Consensus 147 ~~~~g~iv~isS~~~~~~~---------~-----------------------------------------------~~~~ 170 (267)
T 1vl8_A 147 ESDNPSIINIGSLTVEEVT---------M-----------------------------------------------PNIS 170 (267)
T ss_dssp TCSSCEEEEECCGGGTCCC---------S-----------------------------------------------SSCH
T ss_pred HcCCcEEEEECCcchhccC---------C-----------------------------------------------CCCh
Confidence 24679999999753 110 0 1235
Q ss_pred HHHHHHHHHHHHHHHh-----hcCCcEEEEecCccccCCCCCCCcccccccccHHHHHHhhcCCceeeccCCCceeeeee
Q 010075 230 TYVFTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIP 304 (519)
Q Consensus 230 ~Y~~sK~~aE~lv~~~-----~~~lp~~IvRPs~V~g~~~~p~~gw~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~d~vp 304 (519)
.|+.||+..|.+++.. ..++++.+++||.|.++.... +.. ............ ....++.
T Consensus 171 ~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~---~~~----~~~~~~~~~~~~---------p~~~~~~ 234 (267)
T 1vl8_A 171 AYAASKGGVASLTKALAKEWGRYGIRVNVIAPGWYRTKMTEA---VFS----DPEKLDYMLKRI---------PLGRTGV 234 (267)
T ss_dssp HHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSTTTHH---HHT----CHHHHHHHHHTC---------TTSSCBC
T ss_pred hHHHHHHHHHHHHHHHHHHhcccCeEEEEEEeccCccccccc---ccc----ChHHHHHHHhhC---------CCCCCcC
Confidence 7999999999988765 348999999999987654211 100 011111111110 1123678
Q ss_pred HHHHHHHHHHHHHHhccCCCCCcEEEecCC
Q 010075 305 VDMVVNAMIVAMVAHAKQPSDANIYHVGSS 334 (519)
Q Consensus 305 VDdva~aii~a~~~~~~~~~~~~iyni~s~ 334 (519)
.+|+|++++.++..... .-.++++++.+|
T Consensus 235 p~dvA~~v~~l~s~~~~-~itG~~i~vdGG 263 (267)
T 1vl8_A 235 PEDLKGVAVFLASEEAK-YVTGQIIFVDGG 263 (267)
T ss_dssp GGGGHHHHHHHHSGGGT-TCCSCEEEESTT
T ss_pred HHHHHHHHHHHcCcccc-CCcCCeEEECCC
Confidence 99999999998864322 223678988876
|
| >1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A* | Back alignment and structure |
|---|
Probab=99.74 E-value=4.6e-17 Score=159.72 Aligned_cols=238 Identities=14% Similarity=0.114 Sum_probs=145.8
Q ss_pred CCCEEEEeCCccHHHHHHHHHHHH-hCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 010075 11 ENKTILVSGVTGFVAKVFIEKILR-VQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (519)
Q Consensus 11 ~~k~VlITGaTGFlG~~Lv~~LL~-~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (519)
++|+|+|||||||||+++++.|++ .| .+|+++.|+... .+.+.+ .++.. ..++.+
T Consensus 3 ~~k~vlITGasggIG~~~a~~L~~~~g---~~V~~~~r~~~~---~~~~~~---------~l~~~---------~~~~~~ 58 (276)
T 1wma_A 3 GIHVALVTGGNKGIGLAIVRDLCRLFS---GDVVLTARDVTR---GQAAVQ---------QLQAE---------GLSPRF 58 (276)
T ss_dssp CCCEEEESSCSSHHHHHHHHHHHHHSS---SEEEEEESSHHH---HHHHHH---------HHHHT---------TCCCEE
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHhcC---CeEEEEeCChHH---HHHHHH---------HHHhc---------CCeeEE
Confidence 579999999999999999999999 78 678999986421 111111 11111 246889
Q ss_pred EeccCCCCCCCCChhhhHHHHhc-------CccEEEEcCccCCc-------cccHHHHHHHhHHHHHHHHHHHHhc-cCC
Q 010075 90 VPGDISSEDLGLKDSNLKEELWN-------ELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKC-VKL 154 (519)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~~-------~vdiViH~Aa~v~f-------~~~~~~~~~~Nv~gt~~ll~~a~~~-~~l 154 (519)
+.+|+++ .+..+.+++ ++|+|||+||.... .+.++..+++|+.|+.++++.+.+. .+.
T Consensus 59 ~~~Dl~~-------~~~~~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~ 131 (276)
T 1wma_A 59 HQLDIDD-------LQSIRALRDFLRKEYGGLDVLVNNAGIAFKVADPTPFHIQAEVTMKTNFFGTRDVCTELLPLIKPQ 131 (276)
T ss_dssp EECCTTC-------HHHHHHHHHHHHHHHSSEEEEEECCCCCCCTTCCSCHHHHHHHHHHHHTHHHHHHHHHHGGGEEEE
T ss_pred EECCCCC-------HHHHHHHHHHHHHhcCCCCEEEECCcccccCCCccccHHHHHhhhheeeeeHHHHHHHHHHhhCCC
Confidence 9999995 222334443 79999999997532 3567788999999999999999764 223
Q ss_pred ceEEEEecceeecCcCC--e-eecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcHH
Q 010075 155 KVFVHVSTAYVAGERTG--L-ILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTY 231 (519)
Q Consensus 155 ~~~V~vSTa~v~~~~~~--~-i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~Y 231 (519)
.++|++||..++....+ . ..+. +. ..+++.+...........+.. -+..+ ....+...|
T Consensus 132 g~iv~~sS~~~~~~~~~~~~~~~~~-~~-~~~~~e~~~~~~~~~~~~~~~---------------~~~~~-~~~~~~~~Y 193 (276)
T 1wma_A 132 GRVVNVSSIMSVRALKSCSPELQQK-FR-SETITEEELVGLMNKFVEDTK---------------KGVHQ-KEGWPSSAY 193 (276)
T ss_dssp EEEEEECCHHHHHHHHTSCHHHHHH-HH-CSSCCHHHHHHHHHHHHHHHH---------------TTCTT-TTTCCSCHH
T ss_pred CEEEEECChhhhcccccCChhHHhh-cc-ccccchhhhhhhhhhhhhhhc---------------ccccc-cCCCccchh
Confidence 58999999876532100 0 0000 00 001111111100000000000 00000 011233789
Q ss_pred HHHHHHHHHHHHHh-----h----cCCcEEEEecCccccCCCCCCCcccccccccHHHHHHhhcCCceeeccCCCceeee
Q 010075 232 VFTKTMGEMLMQQS-----K----ENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDV 302 (519)
Q Consensus 232 ~~sK~~aE~lv~~~-----~----~~lp~~IvRPs~V~g~~~~p~~gw~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~d~ 302 (519)
+.||+..|.+++.+ . .++.+.+++||.|.++.... ..+
T Consensus 194 ~~sK~a~~~~~~~la~~~~~~~~~~~i~v~~v~PG~v~t~~~~~---------------------------------~~~ 240 (276)
T 1wma_A 194 GVTKIGVTVLSRIHARKLSEQRKGDKILLNACCPGWVRTDMAGP---------------------------------KAT 240 (276)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHCTTSCCEEEEEECCSBCSTTTCT---------------------------------TCS
T ss_pred HHHHHHHHHHHHHHHHHhhcccCCCceEEEEecCCccccCcCCc---------------------------------ccc
Confidence 99999999888764 2 48999999999987653210 125
Q ss_pred eeHHHHHHHHHHHHHHhc-cCCCCCcEEE
Q 010075 303 IPVDMVVNAMIVAMVAHA-KQPSDANIYH 330 (519)
Q Consensus 303 vpVDdva~aii~a~~~~~-~~~~~~~iyn 330 (519)
++++++|++++.++.... .....+.+++
T Consensus 241 ~~~~~~a~~~~~l~~~~~~~~~~~G~~~~ 269 (276)
T 1wma_A 241 KSPEEGAETPVYLALLPPDAEGPHGQFVS 269 (276)
T ss_dssp BCHHHHTHHHHHHHSCCTTCCCCCSCEEE
T ss_pred CChhHhhhhHhhhhcCcccccccCceEec
Confidence 789999999999886332 1122355555
|
| >4e4y_A Short chain dehydrogenase family protein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; 1.80A {Francisella tularensis subsp} | Back alignment and structure |
|---|
Probab=99.74 E-value=4.8e-17 Score=157.74 Aligned_cols=217 Identities=11% Similarity=0.112 Sum_probs=148.1
Q ss_pred CCCEEEEeCCccHHHHHHHHHHHH-hCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 010075 11 ENKTILVSGVTGFVAKVFIEKILR-VQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (519)
Q Consensus 11 ~~k~VlITGaTGFlG~~Lv~~LL~-~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (519)
++|+|+||||+|+||++++++|++ .+ .+|++..|..... .+++.+
T Consensus 3 ~~k~vlITGas~gIG~~~a~~l~~~~g---~~v~~~~~~~~~~-------------------------------~~~~~~ 48 (244)
T 4e4y_A 3 AMANYLVTGGSKGIGKAVVELLLQNKN---HTVINIDIQQSFS-------------------------------AENLKF 48 (244)
T ss_dssp CCEEEEEETTTSHHHHHHHHHHTTSTT---EEEEEEESSCCCC-------------------------------CTTEEE
T ss_pred CCCeEEEeCCCChHHHHHHHHHHhcCC---cEEEEeccccccc-------------------------------cccceE
Confidence 578999999999999999999998 56 6778877765321 256789
Q ss_pred EeccCCCCCCCCChhhhHHHHhc-----CccEEEEcCccCCc-------cccHHHHHHHhHHHHHHHHHHHHhc-cCCce
Q 010075 90 VPGDISSEDLGLKDSNLKEELWN-----ELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKC-VKLKV 156 (519)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~~-----~vdiViH~Aa~v~f-------~~~~~~~~~~Nv~gt~~ll~~a~~~-~~l~~ 156 (519)
+.+|++++ +..+.+.+ ++|++||+||.... .+.++..+++|+.|+..+++.+... .+-.+
T Consensus 49 ~~~Dv~~~-------~~v~~~~~~~~~~~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~g~ 121 (244)
T 4e4y_A 49 IKADLTKQ-------QDITNVLDIIKNVSFDGIFLNAGILIKGSIFDIDIESIKKVLDLNVWSSIYFIKGLENNLKVGAS 121 (244)
T ss_dssp EECCTTCH-------HHHHHHHHHTTTCCEEEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHTGGGEEEEEE
T ss_pred EecCcCCH-------HHHHHHHHHHHhCCCCEEEECCccCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHhccCcE
Confidence 99999953 33334443 79999999998532 2567888999999999999988753 22248
Q ss_pred EEEEecceeecCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcHHHHHHH
Q 010075 157 FVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKT 236 (519)
Q Consensus 157 ~V~vSTa~v~~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~Y~~sK~ 236 (519)
+|++||...+... .....|+.||+
T Consensus 122 iv~~sS~~~~~~~--------------------------------------------------------~~~~~Y~asKa 145 (244)
T 4e4y_A 122 IVFNGSDQCFIAK--------------------------------------------------------PNSFAYTLSKG 145 (244)
T ss_dssp EEEECCGGGTCCC--------------------------------------------------------TTBHHHHHHHH
T ss_pred EEEECCHHHccCC--------------------------------------------------------CCCchhHHHHH
Confidence 9999998654321 12357999999
Q ss_pred HHHHHHHHh-----hcCCcEEEEecCccccCCCCCCCc-ccccc-cccHHHHHHhhcCCceeeccCCCceeeeeeHHHHH
Q 010075 237 MGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPG-WVEDL-KTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVV 309 (519)
Q Consensus 237 ~aE~lv~~~-----~~~lp~~IvRPs~V~g~~~~p~~g-w~~~~-~~~~~~i~~~~~g~~~~~~~~~~~~~d~vpVDdva 309 (519)
..+.+.+.. ..++++..++||.|.++....... +.... .......... ........+..++|+|
T Consensus 146 a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~p~~r~~~p~dvA 216 (244)
T 4e4y_A 146 AIAQMTKSLALDLAKYQIRVNTVCPGTVDTDLYRNLIQKYANNVGISFDEAQKQE---------EKEFPLNRIAQPQEIA 216 (244)
T ss_dssp HHHHHHHHHHHHHGGGTCEEEEEEESCBCCHHHHHHHHHHHHHHTCCHHHHHHHH---------HTTSTTSSCBCHHHHH
T ss_pred HHHHHHHHHHHHHHHcCeEEEEEecCccCchhhHHHHHhhhhhcCCCHHHHHHHH---------hhcCCCCCCcCHHHHH
Confidence 999988765 358999999999997753211000 00000 0000011111 1112234578899999
Q ss_pred HHHHHHHHHhccCCCCCcEEEecCC
Q 010075 310 NAMIVAMVAHAKQPSDANIYHVGSS 334 (519)
Q Consensus 310 ~aii~a~~~~~~~~~~~~iyni~s~ 334 (519)
++++.++..... .-.++++++.+|
T Consensus 217 ~~v~~l~s~~~~-~itG~~i~vdGG 240 (244)
T 4e4y_A 217 ELVIFLLSDKSK-FMTGGLIPIDGG 240 (244)
T ss_dssp HHHHHHHSGGGT-TCCSCEEEESTT
T ss_pred HHHHHHhcCccc-cccCCeEeECCC
Confidence 999999864332 224789999887
|
| >1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.74 E-value=2.5e-17 Score=162.47 Aligned_cols=194 Identities=14% Similarity=0.124 Sum_probs=137.7
Q ss_pred cCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 010075 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (519)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (519)
+++|+|+||||||+||+++++.|++.| .+|+++.|+... .+.+.++ +++. ..++.+
T Consensus 29 l~~k~vlITGasggIG~~la~~L~~~G---~~V~~~~r~~~~---~~~~~~~---------l~~~---------~~~~~~ 84 (272)
T 1yb1_A 29 VTGEIVLITGAGHGIGRLTAYEFAKLK---SKLVLWDINKHG---LEETAAK---------CKGL---------GAKVHT 84 (272)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTT---CEEEEEESCHHH---HHHHHHH---------HHHT---------TCCEEE
T ss_pred cCCCEEEEECCCchHHHHHHHHHHHCC---CEEEEEEcCHHH---HHHHHHH---------HHhc---------CCeEEE
Confidence 678999999999999999999999998 678999886421 1222111 1111 257899
Q ss_pred EeccCCCCCCCCChhhhHHHHh-------cCccEEEEcCccCCc-------cccHHHHHHHhHHHHHHHHHHHHhc---c
Q 010075 90 VPGDISSEDLGLKDSNLKEELW-------NELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKC---V 152 (519)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~-------~~vdiViH~Aa~v~f-------~~~~~~~~~~Nv~gt~~ll~~a~~~---~ 152 (519)
+.+|++++ +..+.++ .++|+|||+||.... .+.++..+++|+.|+.++++.+.+. .
T Consensus 85 ~~~Dl~~~-------~~v~~~~~~~~~~~g~iD~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~ 157 (272)
T 1yb1_A 85 FVVDCSNR-------EDIYSSAKKVKAEIGDVSILVNNAGVVYTSDLFATQDPQIEKTFEVNVLAHFWTTKAFLPAMTKN 157 (272)
T ss_dssp EECCTTCH-------HHHHHHHHHHHHHTCCCSEEEECCCCCCCCCCGGGHHHHHHHHHHHHTHHHHHHHHHHHHHHHHT
T ss_pred EEeeCCCH-------HHHHHHHHHHHHHCCCCcEEEECCCcCCCcchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc
Confidence 99999953 2222333 379999999997643 2456788999999988877776432 3
Q ss_pred CCceEEEEecceeecCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcHHH
Q 010075 153 KLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYV 232 (519)
Q Consensus 153 ~l~~~V~vSTa~v~~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~Y~ 232 (519)
+..++|++||...+... .....|+
T Consensus 158 ~~~~iv~isS~~~~~~~--------------------------------------------------------~~~~~Y~ 181 (272)
T 1yb1_A 158 NHGHIVTVASAAGHVSV--------------------------------------------------------PFLLAYC 181 (272)
T ss_dssp TCEEEEEECCCC-CCCH--------------------------------------------------------HHHHHHH
T ss_pred CCCEEEEEechhhcCCC--------------------------------------------------------CCchhHH
Confidence 56899999998765321 1124699
Q ss_pred HHHHHHHHHHHHh--------hcCCcEEEEecCccccCCCCCCCcccccccccHHHHHHhhcCCceeeccCCCceeeeee
Q 010075 233 FTKTMGEMLMQQS--------KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIP 304 (519)
Q Consensus 233 ~sK~~aE~lv~~~--------~~~lp~~IvRPs~V~g~~~~p~~gw~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~d~vp 304 (519)
.||+..|.+++.+ ..+++++++|||.|.++.... . . .....+++
T Consensus 182 ~sK~a~~~l~~~la~e~~~~~~~gi~v~~v~Pg~v~t~~~~~------~------~----------------~~~~~~~~ 233 (272)
T 1yb1_A 182 SSKFAAVGFHKTLTDELAALQITGVKTTCLCPNFVNTGFIKN------P------S----------------TSLGPTLE 233 (272)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCTTEEEEEEEETHHHHCSTTC------T------H----------------HHHCCCCC
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCCeEEEEEeCCcccCCcccc------c------c----------------ccccCCCC
Confidence 9999999888754 137999999999998764210 0 0 01124688
Q ss_pred HHHHHHHHHHHHHH
Q 010075 305 VDMVVNAMIVAMVA 318 (519)
Q Consensus 305 VDdva~aii~a~~~ 318 (519)
++|+|++++.++..
T Consensus 234 ~~dva~~i~~~~~~ 247 (272)
T 1yb1_A 234 PEEVVNRLMHGILT 247 (272)
T ss_dssp HHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHc
Confidence 99999999999864
|
| >3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A* | Back alignment and structure |
|---|
Probab=99.74 E-value=2e-16 Score=157.96 Aligned_cols=220 Identities=13% Similarity=0.092 Sum_probs=152.3
Q ss_pred cCCCEEEEeCCcc--HHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCce
Q 010075 10 LENKTILVSGVTG--FVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKI 87 (519)
Q Consensus 10 ~~~k~VlITGaTG--FlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v 87 (519)
++||+|+||||+| +||+++++.|++.| .+|+++.|+.......+.+. ++. .++
T Consensus 28 l~~k~vlVTGasg~~GIG~~ia~~la~~G---~~V~~~~r~~~~~~~~~~~~-------------~~~---------~~~ 82 (296)
T 3k31_A 28 MEGKKGVIIGVANDKSLAWGIAKAVCAQG---AEVALTYLSETFKKRVDPLA-------------ESL---------GVK 82 (296)
T ss_dssp TTTCEEEEECCCSTTSHHHHHHHHHHHTT---CEEEEEESSGGGHHHHHHHH-------------HHH---------TCC
T ss_pred cCCCEEEEEeCCCCCCHHHHHHHHHHHCC---CEEEEEeCChHHHHHHHHHH-------------Hhc---------CCe
Confidence 6799999999998 99999999999998 67899998854322222211 111 346
Q ss_pred EEEeccCCCCCCCCChhhhHHHHh-------cCccEEEEcCccCCc-----------cccHHHHHHHhHHHHHHHHHHHH
Q 010075 88 TFVPGDISSEDLGLKDSNLKEELW-------NELDIMVNSAAITKF-----------DERYDVAFGINTLGVIHLVNFAK 149 (519)
Q Consensus 88 ~~v~gDl~~~~lgls~~~~~~~l~-------~~vdiViH~Aa~v~f-----------~~~~~~~~~~Nv~gt~~ll~~a~ 149 (519)
.++.+|++++ +..+.++ .++|++||+||.... .+.++..+++|+.|+..+++.+.
T Consensus 83 ~~~~~Dv~d~-------~~v~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~ 155 (296)
T 3k31_A 83 LTVPCDVSDA-------ESVDNMFKVLAEEWGSLDFVVHAVAFSDKNELKGRYVDTSLGNFLTSMHISCYSFTYIASKAE 155 (296)
T ss_dssp EEEECCTTCH-------HHHHHHHHHHHHHHSCCSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHG
T ss_pred EEEEcCCCCH-------HHHHHHHHHHHHHcCCCCEEEECCCcCCcccccCChhhCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8899999963 3233333 378999999997532 24678889999999999999987
Q ss_pred hc-cCCceEEEEecceeecCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCC
Q 010075 150 KC-VKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWP 228 (519)
Q Consensus 150 ~~-~~l~~~V~vSTa~v~~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~ 228 (519)
.. .+-.++|++||....... ...
T Consensus 156 ~~m~~~g~IV~isS~~~~~~~--------------------------------------------------------~~~ 179 (296)
T 3k31_A 156 PLMTNGGSILTLSYYGAEKVV--------------------------------------------------------PHY 179 (296)
T ss_dssp GGCTTCEEEEEEECGGGTSCC--------------------------------------------------------TTT
T ss_pred HHhhcCCEEEEEEehhhccCC--------------------------------------------------------CCc
Confidence 53 334689999997654211 224
Q ss_pred cHHHHHHHHHHHHHHHh-----hcCCcEEEEecCccccCCCCCCCcccccccccHHHHHHhhcCCceeeccCCCceeeee
Q 010075 229 NTYVFTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVI 303 (519)
Q Consensus 229 n~Y~~sK~~aE~lv~~~-----~~~lp~~IvRPs~V~g~~~~p~~gw~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~d~v 303 (519)
..|+.||+..+.+.+.+ ..++.+..++||.|.++.....+ ............. ....+.
T Consensus 180 ~~Y~asKaal~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~~-------~~~~~~~~~~~~~---------p~~r~~ 243 (296)
T 3k31_A 180 NVMGVCKAALEASVKYLAVDLGKQQIRVNAISAGPVRTLASSGIS-------DFHYILTWNKYNS---------PLRRNT 243 (296)
T ss_dssp THHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECCCCCSSCCSCH-------HHHHHHHHHHHHS---------TTSSCC
T ss_pred hhhHHHHHHHHHHHHHHHHHHhhcCcEEEEEEECCCcCchhhccc-------chHHHHHHHHhcC---------CCCCCC
Confidence 57999999999888765 34799999999999886543211 1111111111111 112356
Q ss_pred eHHHHHHHHHHHHHHhccCCCCCcEEEecCC
Q 010075 304 PVDMVVNAMIVAMVAHAKQPSDANIYHVGSS 334 (519)
Q Consensus 304 pVDdva~aii~a~~~~~~~~~~~~iyni~s~ 334 (519)
..+|+|++++.++..... .-.++++++.+|
T Consensus 244 ~pedvA~~v~fL~s~~a~-~itG~~i~vdGG 273 (296)
T 3k31_A 244 TLDDVGGAALYLLSDLGR-GTTGETVHVDCG 273 (296)
T ss_dssp CHHHHHHHHHHHHSGGGT-TCCSCEEEESTT
T ss_pred CHHHHHHHHHHHcCCccC-CccCCEEEECCC
Confidence 789999999998864332 224789999888
|
| >3kzv_A Uncharacterized oxidoreductase YIR035C; cytoplasmic protein, unknown function, structural genomics, MCSG, protein structure initiative; 2.00A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.74 E-value=1.6e-16 Score=154.97 Aligned_cols=226 Identities=15% Similarity=0.182 Sum_probs=148.2
Q ss_pred CCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEEe
Q 010075 12 NKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVP 91 (519)
Q Consensus 12 ~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v~ 91 (519)
||+++||||+|+||++++++|++.|.+ .+|++..|+... .+.+. ++. ..++.++.
T Consensus 2 gk~~lVTGas~GIG~aia~~l~~~g~~-~~v~~~~r~~~~---~~~~~-------------~~~--------~~~~~~~~ 56 (254)
T 3kzv_A 2 GKVILVTGVSRGIGKSIVDVLFSLDKD-TVVYGVARSEAP---LKKLK-------------EKY--------GDRFFYVV 56 (254)
T ss_dssp CCEEEECSTTSHHHHHHHHHHHHHCSS-CEEEEEESCHHH---HHHHH-------------HHH--------GGGEEEEE
T ss_pred CCEEEEECCCchHHHHHHHHHHhcCCC-eEEEEecCCHHH---HHHHH-------------HHh--------CCceEEEE
Confidence 689999999999999999999998754 477877776321 22222 111 25788999
Q ss_pred ccCCCCCCCCChhhhHHHHh-------cCccEEEEcCccCCc--------cccHHHHHHHhHHHHHHHHHHHHhc---cC
Q 010075 92 GDISSEDLGLKDSNLKEELW-------NELDIMVNSAAITKF--------DERYDVAFGINTLGVIHLVNFAKKC---VK 153 (519)
Q Consensus 92 gDl~~~~lgls~~~~~~~l~-------~~vdiViH~Aa~v~f--------~~~~~~~~~~Nv~gt~~ll~~a~~~---~~ 153 (519)
+|++++ +..+.++ .++|++||+||.... .+.++..+++|+.|+.++++.+... .+
T Consensus 57 ~Dv~~~-------~~v~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~ 129 (254)
T 3kzv_A 57 GDITED-------SVLKQLVNAAVKGHGKIDSLVANAGVLEPVQNVNEIDVNAWKKLYDINFFSIVSLVGIALPELKKTN 129 (254)
T ss_dssp SCTTSH-------HHHHHHHHHHHHHHSCCCEEEEECCCCCCCTTTTSCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT
T ss_pred CCCCCH-------HHHHHHHHHHHHhcCCccEEEECCcccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC
Confidence 999953 3233333 379999999997432 2567888999999999999888321 13
Q ss_pred CceEEEEecceeecCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcHHHH
Q 010075 154 LKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVF 233 (519)
Q Consensus 154 l~~~V~vSTa~v~~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~Y~~ 233 (519)
.++|++||...+... .....|+.
T Consensus 130 -g~iv~isS~~~~~~~--------------------------------------------------------~~~~~Y~a 152 (254)
T 3kzv_A 130 -GNVVFVSSDACNMYF--------------------------------------------------------SSWGAYGS 152 (254)
T ss_dssp -CEEEEECCSCCCCSS--------------------------------------------------------CCSHHHHH
T ss_pred -CeEEEEcCchhccCC--------------------------------------------------------CCcchHHH
Confidence 799999997654321 22457999
Q ss_pred HHHHHHHHHHHh---hcCCcEEEEecCccccCCCCCCCcccccccccHHHHHHhhcCCceeeccCCCceeeeeeHHHHHH
Q 010075 234 TKTMGEMLMQQS---KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVN 310 (519)
Q Consensus 234 sK~~aE~lv~~~---~~~lp~~IvRPs~V~g~~~~p~~gw~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~d~vpVDdva~ 310 (519)
||+..+.+.+.. ..++.+..++||.|.++......................... .....+...+|+|+
T Consensus 153 sK~a~~~~~~~la~e~~~i~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~r~~~p~dva~ 223 (254)
T 3kzv_A 153 SKAALNHFAMTLANEERQVKAIAVAPGIVDTDMQVNIRENVGPSSMSAEQLKMFRGL---------KENNQLLDSSVPAT 223 (254)
T ss_dssp HHHHHHHHHHHHHHHCTTSEEEEEECSSCCCCCSCCCCCCCCTTTSCHHHHHHHHHH---------HTTC----CHHHHH
T ss_pred HHHHHHHHHHHHHhhccCcEEEEEeCCcccchhHHHhhcccCccccCHHHHHHHHHH---------HhcCCcCCcccHHH
Confidence 999999998865 257999999999998876543321110000011111111110 11234688999999
Q ss_pred HHHHHHHHhccCCCCCcEEEecCCC
Q 010075 311 AMIVAMVAHAKQPSDANIYHVGSSL 335 (519)
Q Consensus 311 aii~a~~~~~~~~~~~~iyni~s~~ 335 (519)
+++.++.......-.++++++.++.
T Consensus 224 ~v~~L~s~~~~~~itG~~i~vdg~~ 248 (254)
T 3kzv_A 224 VYAKLALHGIPDGVNGQYLSYNDPA 248 (254)
T ss_dssp HHHHHHHHCCCGGGTTCEEETTCGG
T ss_pred HHHHHHhhcccCCCCccEEEecCcc
Confidence 9999887542111236888887763
|
| >1yde_A Retinal dehydrogenase/reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC; 2.40A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.73 E-value=7.6e-17 Score=158.90 Aligned_cols=223 Identities=13% Similarity=0.085 Sum_probs=148.9
Q ss_pred cCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 010075 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (519)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (519)
++||+|+||||+|+||++++++|++.| .+|+++.|+... .+.+. ++ ..++.+
T Consensus 7 l~~k~vlVTGas~gIG~~ia~~l~~~G---~~V~~~~r~~~~---~~~~~-------------~~---------~~~~~~ 58 (270)
T 1yde_A 7 YAGKVVVVTGGGRGIGAGIVRAFVNSG---ARVVICDKDESG---GRALE-------------QE---------LPGAVF 58 (270)
T ss_dssp TTTCEEEEETCSSHHHHHHHHHHHHTT---CEEEEEESCHHH---HHHHH-------------HH---------CTTEEE
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCC---CEEEEEeCCHHH---HHHHH-------------HH---------hcCCeE
Confidence 679999999999999999999999998 678888886421 11111 11 134788
Q ss_pred EeccCCCCCCCCChhhhHHHHh-------cCccEEEEcCccCCc--------cccHHHHHHHhHHHHHHHHHHHHhc--c
Q 010075 90 VPGDISSEDLGLKDSNLKEELW-------NELDIMVNSAAITKF--------DERYDVAFGINTLGVIHLVNFAKKC--V 152 (519)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~-------~~vdiViH~Aa~v~f--------~~~~~~~~~~Nv~gt~~ll~~a~~~--~ 152 (519)
+.+|++++ +..+.++ .++|++||+||.... .+.++..+++|+.|+.++++.+... +
T Consensus 59 ~~~Dv~d~-------~~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~ 131 (270)
T 1yde_A 59 ILCDVTQE-------DDVKTLVSETIRRFGRLDCVVNNAGHHPPPQRPEETSAQGFRQLLELNLLGTYTLTKLALPYLRK 131 (270)
T ss_dssp EECCTTSH-------HHHHHHHHHHHHHHSCCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHH
T ss_pred EEcCCCCH-------HHHHHHHHHHHHHcCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHH
Confidence 99999953 3233333 379999999997532 1457888999999999999888642 1
Q ss_pred CCceEEEEecceeecCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcHHH
Q 010075 153 KLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYV 232 (519)
Q Consensus 153 ~l~~~V~vSTa~v~~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~Y~ 232 (519)
+..++|++||....... .....|+
T Consensus 132 ~~g~iv~isS~~~~~~~--------------------------------------------------------~~~~~Y~ 155 (270)
T 1yde_A 132 SQGNVINISSLVGAIGQ--------------------------------------------------------AQAVPYV 155 (270)
T ss_dssp HTCEEEEECCHHHHHCC--------------------------------------------------------TTCHHHH
T ss_pred CCCEEEEEcCccccCCC--------------------------------------------------------CCCcccH
Confidence 24799999997543211 1235799
Q ss_pred HHHHHHHHHHHHh-----hcCCcEEEEecCccccCCCCCCCcccccccccHHHHHHhhcCCceeeccCCCceeeeeeHHH
Q 010075 233 FTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDM 307 (519)
Q Consensus 233 ~sK~~aE~lv~~~-----~~~lp~~IvRPs~V~g~~~~p~~gw~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~d~vpVDd 307 (519)
.||+..|.+.+.. ..++++.+++||.|.++...... .........+...... . ....+...+|
T Consensus 156 asKaa~~~~~~~la~e~~~~gi~vn~v~Pg~v~t~~~~~~~---~~~~~~~~~~~~~~~~----~-----p~~r~~~p~d 223 (270)
T 1yde_A 156 ATKGAVTAMTKALALDESPYGVRVNCISPGNIWTPLWEELA---ALMPDPRASIREGMLA----Q-----PLGRMGQPAE 223 (270)
T ss_dssp HHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCHHHHHHH---TTSSSHHHHHHHHHHT----S-----TTSSCBCHHH
T ss_pred HHHHHHHHHHHHHHHHhhhhCcEEEEEEeCccccchhhhhh---hcccchHHHHHHHhhc----C-----CCCCCcCHHH
Confidence 9999999988765 35899999999999886421100 0000000111110000 0 1123578899
Q ss_pred HHHHHHHHHHHhccCCCCCcEEEecCCCCC
Q 010075 308 VVNAMIVAMVAHAKQPSDANIYHVGSSLRN 337 (519)
Q Consensus 308 va~aii~a~~~~~~~~~~~~iyni~s~~~~ 337 (519)
+|++++.++.. . ..-.++++++.+|...
T Consensus 224 va~~v~~L~s~-~-~~itG~~i~vdGG~~~ 251 (270)
T 1yde_A 224 VGAAAVFLASE-A-NFCTGIELLVTGGAEL 251 (270)
T ss_dssp HHHHHHHHHHH-C-TTCCSCEEEESTTTTS
T ss_pred HHHHHHHHccc-C-CCcCCCEEEECCCeec
Confidence 99999988874 2 2224788999888543
|
| >3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium} | Back alignment and structure |
|---|
Probab=99.73 E-value=6.2e-17 Score=163.67 Aligned_cols=221 Identities=14% Similarity=0.160 Sum_probs=147.7
Q ss_pred hcCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecC-------CcccHHHHHHHHHhhhhhHHHHHhhhcccccc
Q 010075 9 FLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAA-------DIDSAALRFQNEVLAKDVFNVLKEKWGTRLNS 81 (519)
Q Consensus 9 ~~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~-------~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~ 81 (519)
.++||+|+||||+|+||+++++.|++.| .+|+++.|+. ......+.+.+++ .+.
T Consensus 24 ~l~gk~vlVTGas~GIG~aia~~la~~G---~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~---------~~~------- 84 (322)
T 3qlj_A 24 VVDGRVVIVTGAGGGIGRAHALAFAAEG---ARVVVNDIGVGLDGSPASGGSAAQSVVDEI---------TAA------- 84 (322)
T ss_dssp TTTTCEEEETTTTSHHHHHHHHHHHHTT---CEEEEECCCBCTTSSBTCTTSHHHHHHHHH---------HHT-------
T ss_pred ccCCCEEEEECCCcHHHHHHHHHHHHCC---CEEEEEeCcccccccccccHHHHHHHHHHH---------Hhc-------
Confidence 3679999999999999999999999998 6888888861 1122233332221 111
Q ss_pred ccCCceEEEeccCCCCCCCCChhhhHHHHh-------cCccEEEEcCccCCc-------cccHHHHHHHhHHHHHHHHHH
Q 010075 82 FISEKITFVPGDISSEDLGLKDSNLKEELW-------NELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNF 147 (519)
Q Consensus 82 ~~~~~v~~v~gDl~~~~lgls~~~~~~~l~-------~~vdiViH~Aa~v~f-------~~~~~~~~~~Nv~gt~~ll~~ 147 (519)
..++.++.+|++++ +..+.++ .++|++||+||.... .+.++..+++|+.|+..+++.
T Consensus 85 --~~~~~~~~~Dv~d~-------~~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~ 155 (322)
T 3qlj_A 85 --GGEAVADGSNVADW-------DQAAGLIQTAVETFGGLDVLVNNAGIVRDRMIANTSEEEFDAVIAVHLKGHFATMRH 155 (322)
T ss_dssp --TCEEEEECCCTTSH-------HHHHHHHHHHHHHHSCCCEEECCCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred --CCcEEEEECCCCCH-------HHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHH
Confidence 25788999999953 3233333 379999999998642 256788899999999999988
Q ss_pred HHhc-cC--------CceEEEEecceeecCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhcc
Q 010075 148 AKKC-VK--------LKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLG 218 (519)
Q Consensus 148 a~~~-~~--------l~~~V~vSTa~v~~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg 218 (519)
+... .. -.++|++||.......
T Consensus 156 ~~~~~~~~~~~~~~~~g~IV~isS~~~~~~~------------------------------------------------- 186 (322)
T 3qlj_A 156 AAAYWRGLSKAGKAVDGRIINTSSGAGLQGS------------------------------------------------- 186 (322)
T ss_dssp HHHHHHHHHHTTCCCCEEEEEECCHHHHHCB-------------------------------------------------
T ss_pred HHHHHHHccccCCCCCcEEEEEcCHHHccCC-------------------------------------------------
Confidence 7542 10 1489999997654211
Q ss_pred ccccccCCCCcHHHHHHHHHHHHHHHh-----hcCCcEEEEecCccccCCCCCCCcccccccccHHHHHHhhcCCceeec
Q 010075 219 TERAKLHGWPNTYVFTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLV 293 (519)
Q Consensus 219 ~~~~~~~~~~n~Y~~sK~~aE~lv~~~-----~~~lp~~IvRPs~V~g~~~~p~~gw~~~~~~~~~~i~~~~~g~~~~~~ 293 (519)
.....|+.||+..+.+.+.+ ..++.+..+.|| +..+..+.. ... . .
T Consensus 187 -------~~~~~Y~asKaal~~l~~~la~e~~~~gI~vn~v~PG-~~t~~~~~~---~~~------~------------~ 237 (322)
T 3qlj_A 187 -------VGQGNYSAAKAGIATLTLVGAAEMGRYGVTVNAIAPS-ARTRMTETV---FAE------M------------M 237 (322)
T ss_dssp -------TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC-TTSCCSCCS---CCC--------------------
T ss_pred -------CCCccHHHHHHHHHHHHHHHHHHhcccCcEEEEecCC-CCCccchhh---hhh------h------------h
Confidence 12357999999999888765 358999999999 544332111 110 0 0
Q ss_pred cCCCceeeeeeHHHHHHHHHHHHHHhccCCCCCcEEEecCCCC
Q 010075 294 GETKVIMDVIPVDMVVNAMIVAMVAHAKQPSDANIYHVGSSLR 336 (519)
Q Consensus 294 ~~~~~~~d~vpVDdva~aii~a~~~~~~~~~~~~iyni~s~~~ 336 (519)
.......+++.++|+|++++.++..... .-.++++++.+|..
T Consensus 238 ~~~~~~~~~~~pedva~~v~~L~s~~~~-~itG~~i~vdGG~~ 279 (322)
T 3qlj_A 238 ATQDQDFDAMAPENVSPLVVWLGSAEAR-DVTGKVFEVEGGKI 279 (322)
T ss_dssp ------CCTTCGGGTHHHHHHHTSGGGG-GCCSCEEEEETTEE
T ss_pred hccccccCCCCHHHHHHHHHHHhCcccc-CCCCCEEEECCCcc
Confidence 0111223456789999999988864332 12378999988743
|
| >2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=99.73 E-value=6.8e-17 Score=155.30 Aligned_cols=186 Identities=17% Similarity=0.153 Sum_probs=126.5
Q ss_pred CCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEEe
Q 010075 12 NKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVP 91 (519)
Q Consensus 12 ~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v~ 91 (519)
+|+|+||||||+||++++++|++.| .+|+++.|+... .+.+. ++ ..++.++.
T Consensus 5 ~k~vlVtGasggiG~~~a~~l~~~G---~~V~~~~r~~~~---~~~~~-------------~~---------~~~~~~~~ 56 (234)
T 2ehd_A 5 KGAVLITGASRGIGEATARLLHAKG---YRVGLMARDEKR---LQALA-------------AE---------LEGALPLP 56 (234)
T ss_dssp CCEEEESSTTSHHHHHHHHHHHHTT---CEEEEEESCHHH---HHHHH-------------HH---------STTCEEEE
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCC---CEEEEEECCHHH---HHHHH-------------HH---------hhhceEEE
Confidence 6899999999999999999999998 678999886321 11111 11 13678899
Q ss_pred ccCCCCCCCCChhhhHHHHh-------cCccEEEEcCccCCc-------cccHHHHHHHhHHHHHHHHHHH----HhccC
Q 010075 92 GDISSEDLGLKDSNLKEELW-------NELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFA----KKCVK 153 (519)
Q Consensus 92 gDl~~~~lgls~~~~~~~l~-------~~vdiViH~Aa~v~f-------~~~~~~~~~~Nv~gt~~ll~~a----~~~~~ 153 (519)
+|++++ ++ .+.++ .++|+|||+||.... .+.++..+++|+.|+.++++.+ ++ .+
T Consensus 57 ~D~~~~------~~-~~~~~~~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~-~~ 128 (234)
T 2ehd_A 57 GDVREE------GD-WARAVAAMEEAFGELSALVNNAGVGVMKPVHELTLEEWRLVLDTNLTGAFLGIRHAVPALLR-RG 128 (234)
T ss_dssp CCTTCH------HH-HHHHHHHHHHHHSCCCEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHT-TT
T ss_pred ecCCCH------HH-HHHHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHh-CC
Confidence 999963 22 22332 479999999997542 2457788999999998666554 33 25
Q ss_pred CceEEEEecceeecCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcHHHH
Q 010075 154 LKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVF 233 (519)
Q Consensus 154 l~~~V~vSTa~v~~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~Y~~ 233 (519)
.++||++||...+... .....|+.
T Consensus 129 ~~~iv~isS~~~~~~~--------------------------------------------------------~~~~~Y~~ 152 (234)
T 2ehd_A 129 GGTIVNVGSLAGKNPF--------------------------------------------------------KGGAAYNA 152 (234)
T ss_dssp CEEEEEECCTTTTSCC--------------------------------------------------------TTCHHHHH
T ss_pred CcEEEEECCchhcCCC--------------------------------------------------------CCCchhhH
Confidence 6899999998654311 22457999
Q ss_pred HHHHHHHHHHHh-----hcCCcEEEEecCccccCCCCCCCcccccccccHHHHHHhhcCCceeeccCCCceeeeeeHHHH
Q 010075 234 TKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMV 308 (519)
Q Consensus 234 sK~~aE~lv~~~-----~~~lp~~IvRPs~V~g~~~~p~~gw~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~d~vpVDdv 308 (519)
||+..|.+.+.. ..+++++++|||.|.++..... . .. ...+..+|+
T Consensus 153 sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~---------~---------~~-----------~~~~~~~dv 203 (234)
T 2ehd_A 153 SKFGLLGLAGAAMLDLREANVRVVNVLPGSVDTGFAGNT---------P---------GQ-----------AWKLKPEDV 203 (234)
T ss_dssp HHHHHHHHHHHHHHHHGGGTEEEEEEECC---------------------------------------------CCHHHH
T ss_pred HHHHHHHHHHHHHHHHhhcCcEEEEEEeCCCcCCccccc---------c---------cc-----------cCCCCHHHH
Confidence 999888877654 3589999999998866432100 0 00 014689999
Q ss_pred HHHHHHHHHH
Q 010075 309 VNAMIVAMVA 318 (519)
Q Consensus 309 a~aii~a~~~ 318 (519)
|++++.++..
T Consensus 204 A~~~~~l~~~ 213 (234)
T 2ehd_A 204 AQAVLFALEM 213 (234)
T ss_dssp HHHHHHHHHS
T ss_pred HHHHHHHhCC
Confidence 9999998864
|
| >4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A* | Back alignment and structure |
|---|
Probab=99.73 E-value=4.9e-17 Score=160.86 Aligned_cols=225 Identities=12% Similarity=0.098 Sum_probs=152.3
Q ss_pred hhcCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCce
Q 010075 8 EFLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKI 87 (519)
Q Consensus 8 ~~~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v 87 (519)
..++||+++||||+|+||+++++.|++.| .+|+++.|+.... ++..++ +.+.. ..++
T Consensus 23 ~~l~~k~~lVTGas~GIG~aia~~l~~~G---~~V~~~~r~~~~~---~~~~~~---------~~~~~--------~~~~ 79 (277)
T 4fc7_A 23 DLLRDKVAFITGGGSGIGFRIAEIFMRHG---CHTVIASRSLPRV---LTAARK---------LAGAT--------GRRC 79 (277)
T ss_dssp TTTTTCEEEEETTTSHHHHHHHHHHHTTT---CEEEEEESCHHHH---HHHHHH---------HHHHH--------SSCE
T ss_pred cccCCCEEEEeCCCchHHHHHHHHHHHCC---CEEEEEeCCHHHH---HHHHHH---------HHHhc--------CCcE
Confidence 34789999999999999999999999998 6888888874221 111111 11111 2578
Q ss_pred EEEeccCCCCCCCCChhhhHHHHh-------cCccEEEEcCccCCc-------cccHHHHHHHhHHHHHHHHHHHHhc--
Q 010075 88 TFVPGDISSEDLGLKDSNLKEELW-------NELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKC-- 151 (519)
Q Consensus 88 ~~v~gDl~~~~lgls~~~~~~~l~-------~~vdiViH~Aa~v~f-------~~~~~~~~~~Nv~gt~~ll~~a~~~-- 151 (519)
.++.+|++++ +..+.++ .++|++||+||.... .+.++..+++|+.|+.++++.+...
T Consensus 80 ~~~~~Dv~~~-------~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~ 152 (277)
T 4fc7_A 80 LPLSMDVRAP-------PAVMAAVDQALKEFGRIDILINCAAGNFLCPAGALSFNAFKTVMDIDTSGTFNVSRVLYEKFF 152 (277)
T ss_dssp EEEECCTTCH-------HHHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTH
T ss_pred EEEEcCCCCH-------HHHHHHHHHHHHHcCCCCEEEECCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHH
Confidence 9999999963 2223333 379999999996432 2567888999999999999987431
Q ss_pred -cCCceEEEEecceeecCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcH
Q 010075 152 -VKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNT 230 (519)
Q Consensus 152 -~~l~~~V~vSTa~v~~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~ 230 (519)
.+..++|++||....... .....
T Consensus 153 ~~~~g~iv~isS~~~~~~~--------------------------------------------------------~~~~~ 176 (277)
T 4fc7_A 153 RDHGGVIVNITATLGNRGQ--------------------------------------------------------ALQVH 176 (277)
T ss_dssp HHHCEEEEEECCSHHHHTC--------------------------------------------------------TTCHH
T ss_pred HcCCCEEEEECchhhCCCC--------------------------------------------------------CCcHH
Confidence 234689999997654211 22357
Q ss_pred HHHHHHHHHHHHHHh-----hcCCcEEEEecCccccCCCCCCCcccccccccHHHHHHhhcCCceeeccCCCceeeeeeH
Q 010075 231 YVFTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPV 305 (519)
Q Consensus 231 Y~~sK~~aE~lv~~~-----~~~lp~~IvRPs~V~g~~~~p~~gw~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~d~vpV 305 (519)
|+.||+..+.+.+.. ..++++..++||.|.++... ................ .....+...
T Consensus 177 Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~------~~~~~~~~~~~~~~~~---------~p~~r~~~p 241 (277)
T 4fc7_A 177 AGSAKAAVDAMTRHLAVEWGPQNIRVNSLAPGPISGTEGL------RRLGGPQASLSTKVTA---------SPLQRLGNK 241 (277)
T ss_dssp HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBSSSHHH------HHHSCCHHHHHHHHHT---------STTSSCBCH
T ss_pred HHHHHHHHHHHHHHHHHHhhhcCeEEEEEEECCEecchhh------hhccCCHHHHHHHhcc---------CCCCCCcCH
Confidence 999999999888755 34799999999999875310 0001111112222111 112346789
Q ss_pred HHHHHHHHHHHHHhccCCCCCcEEEecCC
Q 010075 306 DMVVNAMIVAMVAHAKQPSDANIYHVGSS 334 (519)
Q Consensus 306 Ddva~aii~a~~~~~~~~~~~~iyni~s~ 334 (519)
+|+|++++.++..... --.++++++.+|
T Consensus 242 ~dvA~~v~fL~s~~~~-~itG~~i~vdGG 269 (277)
T 4fc7_A 242 TEIAHSVLYLASPLAS-YVTGAVLVADGG 269 (277)
T ss_dssp HHHHHHHHHHHSGGGT-TCCSCEEEESTT
T ss_pred HHHHHHHHHHcCCccC-CcCCCEEEECCC
Confidence 9999999998864332 224789999887
|
| >3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium} | Back alignment and structure |
|---|
Probab=99.73 E-value=2.8e-16 Score=157.21 Aligned_cols=239 Identities=15% Similarity=0.136 Sum_probs=154.4
Q ss_pred hhhhcCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcc------cHHHHHHHHHhhhhhHHHHHhhhcccc
Q 010075 6 VVEFLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADID------SAALRFQNEVLAKDVFNVLKEKWGTRL 79 (519)
Q Consensus 6 i~~~~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~------~~~~rl~~~~~~~~~f~~l~~~~~~~~ 79 (519)
+..-++||+++||||+|+||+++++.|++.| .+|+++.|++... ...+++.+ . .+.++.
T Consensus 22 m~~~l~gk~~lVTGas~GIG~aia~~la~~G---~~V~~~~~~~~~~~~~~~~~~~~~~~~-~-----~~~~~~------ 86 (299)
T 3t7c_A 22 MAGKVEGKVAFITGAARGQGRSHAITLAREG---ADIIAIDVCKQLDGVKLPMSTPDDLAE-T-----VRQVEA------ 86 (299)
T ss_dssp CCCTTTTCEEEEESTTSHHHHHHHHHHHHTT---CEEEEEECCSCCTTCCSCCCCHHHHHH-H-----HHHHHH------
T ss_pred cccccCCCEEEEECCCCHHHHHHHHHHHHCC---CEEEEEecccccccccccccCHHHHHH-H-----HHHHHh------
Confidence 3445789999999999999999999999999 6788888874211 00122211 0 011111
Q ss_pred ccccCCceEEEeccCCCCCCCCChhhhHHHHh-------cCccEEEEcCccCCc--------cccHHHHHHHhHHHHHHH
Q 010075 80 NSFISEKITFVPGDISSEDLGLKDSNLKEELW-------NELDIMVNSAAITKF--------DERYDVAFGINTLGVIHL 144 (519)
Q Consensus 80 ~~~~~~~v~~v~gDl~~~~lgls~~~~~~~l~-------~~vdiViH~Aa~v~f--------~~~~~~~~~~Nv~gt~~l 144 (519)
...++.++.+|++++ +..+.++ .++|++||+||.... .+.++..+++|+.|+..+
T Consensus 87 ---~~~~~~~~~~Dv~~~-------~~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l 156 (299)
T 3t7c_A 87 ---LGRRIIASQVDVRDF-------DAMQAAVDDGVTQLGRLDIVLANAALASEGTRLNRMDPKTWRDMIDVNLNGAWIT 156 (299)
T ss_dssp ---TTCCEEEEECCTTCH-------HHHHHHHHHHHHHHSCCCEEEECCCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHH
T ss_pred ---cCCceEEEECCCCCH-------HHHHHHHHHHHHHhCCCCEEEECCCCCCCCCchhhCCHHHHHHHHHHhhHHHHHH
Confidence 135789999999963 2223333 379999999997532 246788899999999999
Q ss_pred HHHHHhc----cCCceEEEEecceeecCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhcccc
Q 010075 145 VNFAKKC----VKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTE 220 (519)
Q Consensus 145 l~~a~~~----~~l~~~V~vSTa~v~~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~ 220 (519)
++.+... ++..++|++||...+...
T Consensus 157 ~~~~~~~~~~~~~~g~Iv~isS~~~~~~~--------------------------------------------------- 185 (299)
T 3t7c_A 157 ARVAIPHIMAGKRGGSIVFTSSIGGLRGA--------------------------------------------------- 185 (299)
T ss_dssp HHHHHHHHHHTTSCEEEEEECCGGGTSCC---------------------------------------------------
T ss_pred HHHHHHHHHhcCCCcEEEEECChhhccCC---------------------------------------------------
Confidence 9887542 235789999997654211
Q ss_pred ccccCCCCcHHHHHHHHHHHHHHHh-----hcCCcEEEEecCccccCCCCCCCcc---ccccc--ccHHHHHHhhcCCce
Q 010075 221 RAKLHGWPNTYVFTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGW---VEDLK--TINTLFVASAQGNLR 290 (519)
Q Consensus 221 ~~~~~~~~n~Y~~sK~~aE~lv~~~-----~~~lp~~IvRPs~V~g~~~~p~~gw---~~~~~--~~~~~i~~~~~g~~~ 290 (519)
.....|+.||+..+.+.+.. ..++.+..+.||.|.++.....+.+ ..... ..........
T Consensus 186 -----~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----- 255 (299)
T 3t7c_A 186 -----ENIGNYIASKHGLHGLMRTMALELGPRNIRVNIVCPSSVATPMLLNEPTYRMFRPDLENPTVEDFQVASR----- 255 (299)
T ss_dssp -----TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCBSSTTTSSHHHHHHHCTTSSSCCHHHHHHHHH-----
T ss_pred -----CCcchHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCCccCccccccchhhhhhhhhccchhhHHHHHhh-----
Confidence 22357999999999888754 3479999999999988754221000 00000 0000000000
Q ss_pred eeccCCCceeeeeeHHHHHHHHHHHHHHhccCCCCCcEEEecCC
Q 010075 291 CLVGETKVIMDVIPVDMVVNAMIVAMVAHAKQPSDANIYHVGSS 334 (519)
Q Consensus 291 ~~~~~~~~~~d~vpVDdva~aii~a~~~~~~~~~~~~iyni~s~ 334 (519)
...... ..+...+|+|++++.++..... --.++++++.+|
T Consensus 256 --~~~~~p-~r~~~pedvA~~v~fL~s~~a~-~itG~~i~vdGG 295 (299)
T 3t7c_A 256 --QMHVLP-IPYVEPADISNAILFLVSDDAR-YITGVSLPVDGG 295 (299)
T ss_dssp --HHSSSS-CSCBCHHHHHHHHHHHHSGGGT-TCCSCEEEESTT
T ss_pred --hhcccC-cCCCCHHHHHHHHHHHhCcccc-cCcCCEEeeCCC
Confidence 000011 3467899999999998864332 224789999887
|
| >2nm0_A Probable 3-oxacyl-(acyl-carrier-protein) reductas; oxidoreductase; 1.99A {Streptomyces coelicolor} | Back alignment and structure |
|---|
Probab=99.73 E-value=6.1e-17 Score=158.10 Aligned_cols=210 Identities=14% Similarity=0.153 Sum_probs=144.0
Q ss_pred hcCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceE
Q 010075 9 FLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKIT 88 (519)
Q Consensus 9 ~~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~ 88 (519)
.+.+|+|+||||||+||+++++.|++.| .+|+++.|+.... +.+.
T Consensus 18 ~l~~k~vlVTGas~gIG~aia~~l~~~G---~~V~~~~r~~~~~--------------------------------~~~~ 62 (253)
T 2nm0_A 18 SHMSRSVLVTGGNRGIGLAIARAFADAG---DKVAITYRSGEPP--------------------------------EGFL 62 (253)
T ss_dssp --CCCEEEEETTTSHHHHHHHHHHHHTT---CEEEEEESSSCCC--------------------------------TTSE
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHCC---CEEEEEeCChHhh--------------------------------ccce
Confidence 4678999999999999999999999998 6789998875321 3367
Q ss_pred EEeccCCCCCCCCChhhhHHHHh-------cCccEEEEcCccCCc-------cccHHHHHHHhHHHHHHHHHHHHhc---
Q 010075 89 FVPGDISSEDLGLKDSNLKEELW-------NELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKC--- 151 (519)
Q Consensus 89 ~v~gDl~~~~lgls~~~~~~~l~-------~~vdiViH~Aa~v~f-------~~~~~~~~~~Nv~gt~~ll~~a~~~--- 151 (519)
++.+|++++ +..+.++ .++|++||+||.... .+.++..+++|+.|+.++++.+.+.
T Consensus 63 ~~~~Dl~d~-------~~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~ 135 (253)
T 2nm0_A 63 AVKCDITDT-------EQVEQAYKEIEETHGPVEVLIANAGVTKDQLLMRMSEEDFTSVVETNLTGTFRVVKRANRAMLR 135 (253)
T ss_dssp EEECCTTSH-------HHHHHHHHHHHHHTCSCSEEEEECSCCTTTC---CCTTTTHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEecCCCH-------HHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 899999953 2222333 358999999997532 2567889999999999998877542
Q ss_pred cCCceEEEEecceeecCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcHH
Q 010075 152 VKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTY 231 (519)
Q Consensus 152 ~~l~~~V~vSTa~v~~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~Y 231 (519)
.+..++|++||....... .....|
T Consensus 136 ~~~g~iv~isS~~~~~~~--------------------------------------------------------~~~~~Y 159 (253)
T 2nm0_A 136 AKKGRVVLISSVVGLLGS--------------------------------------------------------AGQANY 159 (253)
T ss_dssp HTCEEEEEECCCCCCCCH--------------------------------------------------------HHHHHH
T ss_pred cCCCEEEEECchhhCCCC--------------------------------------------------------CCcHHH
Confidence 256799999997543211 012469
Q ss_pred HHHHHHHHHHHHHh-----hcCCcEEEEecCccccCCCCCCCcccccccccHHHHHHhhcCCceeeccCCCceeeeeeHH
Q 010075 232 VFTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVD 306 (519)
Q Consensus 232 ~~sK~~aE~lv~~~-----~~~lp~~IvRPs~V~g~~~~p~~gw~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~d~vpVD 306 (519)
+.||+..+.+.+.. ..++.+.+++||.|.++.....+ .. ........ .....++..+
T Consensus 160 ~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~---~~------~~~~~~~~---------~p~~~~~~p~ 221 (253)
T 2nm0_A 160 AASKAGLVGFARSLARELGSRNITFNVVAPGFVDTDMTKVLT---DE------QRANIVSQ---------VPLGRYARPE 221 (253)
T ss_dssp HHHHHHHHHHHHHHHHHHCSSSEEEEEEEECSBCC------------------CHHHHHTT---------CTTCSCBCHH
T ss_pred HHHHHHHHHHHHHHHHHhhhcCeEEEEEEeCcCcCcchhhcC---HH------HHHHHHhc---------CCCCCCcCHH
Confidence 99999999888754 35799999999998765432110 00 00111111 0112468999
Q ss_pred HHHHHHHHHHHHhccCCCCCcEEEecCCC
Q 010075 307 MVVNAMIVAMVAHAKQPSDANIYHVGSSL 335 (519)
Q Consensus 307 dva~aii~a~~~~~~~~~~~~iyni~s~~ 335 (519)
|+|++++.++..... .-.++++++.+|.
T Consensus 222 dvA~~i~~l~s~~~~-~~tG~~i~vdGG~ 249 (253)
T 2nm0_A 222 EIAATVRFLASDDAS-YITGAVIPVDGGL 249 (253)
T ss_dssp HHHHHHHHHHSGGGT-TCCSCEEEESTTT
T ss_pred HHHHHHHHHhCcccc-CCcCcEEEECCcc
Confidence 999999998864332 2236889998773
|
| >3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5} | Back alignment and structure |
|---|
Probab=99.73 E-value=9.7e-17 Score=157.31 Aligned_cols=196 Identities=14% Similarity=0.171 Sum_probs=134.5
Q ss_pred cCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 010075 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (519)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (519)
++||+||||||+|+||++++++|++.| .+|+++.|+... .+.+.++ +.+. ..++.+
T Consensus 27 l~~k~vlITGas~gIG~~la~~l~~~G---~~V~~~~r~~~~---~~~~~~~---------~~~~---------~~~~~~ 82 (262)
T 3rkr_A 27 LSGQVAVVTGASRGIGAAIARKLGSLG---ARVVLTARDVEK---LRAVERE---------IVAA---------GGEAES 82 (262)
T ss_dssp TTTCEEEESSTTSHHHHHHHHHHHHTT---CEEEEEESCHHH---HHHHHHH---------HHHT---------TCEEEE
T ss_pred cCCCEEEEECCCChHHHHHHHHHHHCC---CEEEEEECCHHH---HHHHHHH---------HHHh---------CCceeE
Confidence 678999999999999999999999998 678898886422 1222211 1111 257889
Q ss_pred EeccCCCCCCCCChhhhHHHHh-------cCccEEEEcCccCC----c----cccHHHHHHHhHHHHHHHHHHHHhc---
Q 010075 90 VPGDISSEDLGLKDSNLKEELW-------NELDIMVNSAAITK----F----DERYDVAFGINTLGVIHLVNFAKKC--- 151 (519)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~-------~~vdiViH~Aa~v~----f----~~~~~~~~~~Nv~gt~~ll~~a~~~--- 151 (519)
+.+|++++ +....++ .++|+|||+||... + .+.++..+++|+.|+.++++.+...
T Consensus 83 ~~~D~~~~-------~~v~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~ 155 (262)
T 3rkr_A 83 HACDLSHS-------DAIAAFATGVLAAHGRCDVLVNNAGVGWFGGPLHTMKPAEWDALIAVNLKAPYLLLRAFAPAMIA 155 (262)
T ss_dssp EECCTTCH-------HHHHHHHHHHHHHHSCCSEEEECCCCCCCSSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHH
T ss_pred EEecCCCH-------HHHHHHHHHHHHhcCCCCEEEECCCccCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHh
Confidence 99999963 2222332 36999999999732 1 2467788999999999998887541
Q ss_pred cCCceEEEEecceeecCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcHH
Q 010075 152 VKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTY 231 (519)
Q Consensus 152 ~~l~~~V~vSTa~v~~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~Y 231 (519)
.+..++|++||...+... .....|
T Consensus 156 ~~~g~iv~isS~~~~~~~--------------------------------------------------------~~~~~Y 179 (262)
T 3rkr_A 156 AKRGHIINISSLAGKNPV--------------------------------------------------------ADGAAY 179 (262)
T ss_dssp TTCCEEEEECSSCSSCCC--------------------------------------------------------TTCHHH
T ss_pred CCCceEEEEechhhcCCC--------------------------------------------------------CCCchH
Confidence 356799999997654211 224679
Q ss_pred HHHHHHHHHHHHHh-----hcCCcEEEEecCccccCCCCCCCcccccccccHHHHHHhhcCCceeeccCCCceeeeeeHH
Q 010075 232 VFTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVD 306 (519)
Q Consensus 232 ~~sK~~aE~lv~~~-----~~~lp~~IvRPs~V~g~~~~p~~gw~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~d~vpVD 306 (519)
+.||+..+.+++.+ ..++++.+++||.|..+...... .......++..+
T Consensus 180 ~asKaa~~~l~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~--------------------------~~~~~~~~~~p~ 233 (262)
T 3rkr_A 180 TASKWGLNGLMTSAAEELRQHQVRVSLVAPGSVRTEFGVGLS--------------------------AKKSALGAIEPD 233 (262)
T ss_dssp HHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCC------------------------------------------CCCHH
T ss_pred HHHHHHHHHHHHHHHHHhhhcCcEEEEEecCCCcCCcccccc--------------------------cccccccCCCHH
Confidence 99999999888755 35899999999998765432110 001123457899
Q ss_pred HHHHHHHHHHHH
Q 010075 307 MVVNAMIVAMVA 318 (519)
Q Consensus 307 dva~aii~a~~~ 318 (519)
|+|++++.++..
T Consensus 234 dvA~~v~~l~s~ 245 (262)
T 3rkr_A 234 DIADVVALLATQ 245 (262)
T ss_dssp HHHHHHHHHHTC
T ss_pred HHHHHHHHHhcC
Confidence 999999998863
|
| >2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.73 E-value=4.3e-17 Score=160.10 Aligned_cols=216 Identities=14% Similarity=0.124 Sum_probs=148.8
Q ss_pred cCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 010075 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (519)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (519)
+++|+++||||||+||++++++|++.| .+|+++.|+... .+.+. ++ ...++.+
T Consensus 4 l~~k~vlITGas~gIG~aia~~l~~~G---~~V~~~~r~~~~---~~~~~-------------~~--------~~~~~~~ 56 (263)
T 2a4k_A 4 LSGKTILVTGAASGIGRAALDLFAREG---ASLVAVDREERL---LAEAV-------------AA--------LEAEAIA 56 (263)
T ss_dssp TTTCEEEEESTTSHHHHHHHHHHHHTT---CEEEEEESCHHH---HHHHH-------------HT--------CCSSEEE
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCC---CEEEEEeCCHHH---HHHHH-------------HH--------hcCceEE
Confidence 578999999999999999999999998 678999886321 11111 11 1246889
Q ss_pred EeccCCCCCCCCChhhhHHHHh-------cCccEEEEcCccCCc-------cccHHHHHHHhHHHHHHHHHHHHhc-cCC
Q 010075 90 VPGDISSEDLGLKDSNLKEELW-------NELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKC-VKL 154 (519)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~-------~~vdiViH~Aa~v~f-------~~~~~~~~~~Nv~gt~~ll~~a~~~-~~l 154 (519)
+.+|++++ +..+.++ .++|++||+||.... .+.++..+++|+.|+.++++.+.+. ++.
T Consensus 57 ~~~D~~~~-------~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~ 129 (263)
T 2a4k_A 57 VVADVSDP-------KAVEAVFAEALEEFGRLHGVAHFAGVAHSALSWNLPLEAWEKVLRVNLTGSFLVARKAGEVLEEG 129 (263)
T ss_dssp EECCTTSH-------HHHHHHHHHHHHHHSCCCEEEEGGGGTTTTC----CHHHHHHHHHHHHHHHHHHHHHHHHHCCTT
T ss_pred EEcCCCCH-------HHHHHHHHHHHHHcCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcC
Confidence 99999953 2223333 368999999997542 2456788999999999999998763 224
Q ss_pred ceEEEEecceeecCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcHHHHH
Q 010075 155 KVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFT 234 (519)
Q Consensus 155 ~~~V~vSTa~v~~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~Y~~s 234 (519)
.++|++||...++. .....|+.|
T Consensus 130 g~iv~isS~~~~~~---------------------------------------------------------~~~~~Y~as 152 (263)
T 2a4k_A 130 GSLVLTGSVAGLGA---------------------------------------------------------FGLAHYAAG 152 (263)
T ss_dssp CEEEEECCCTTCCH---------------------------------------------------------HHHHHHHHC
T ss_pred CEEEEEecchhcCC---------------------------------------------------------CCcHHHHHH
Confidence 68999999866521 012469999
Q ss_pred HHHHHHHHHHh-----hcCCcEEEEecCccccCCCCCCCcccccccccHHHHHHhhcCCceeeccCCCceeeeeeHHHHH
Q 010075 235 KTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVV 309 (519)
Q Consensus 235 K~~aE~lv~~~-----~~~lp~~IvRPs~V~g~~~~p~~gw~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~d~vpVDdva 309 (519)
|+..+.+.+.. ..++++.+++||.|.++.....+ ........... ....+...+|+|
T Consensus 153 K~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~---------~~~~~~~~~~~---------p~~~~~~p~dvA 214 (263)
T 2a4k_A 153 KLGVVGLARTLALELARKGVRVNVLLPGLIQTPMTAGLP---------PWAWEQEVGAS---------PLGRAGRPEEVA 214 (263)
T ss_dssp SSHHHHHHHHHHHHHTTTTCEEEEEEECSBCCGGGTTSC---------HHHHHHHHHTS---------TTCSCBCHHHHH
T ss_pred HHHHHHHHHHHHHHhhhhCcEEEEEEeCcCcCchhhhcC---------HHHHHHHHhcC---------CCCCCcCHHHHH
Confidence 99877777644 35899999999999886542211 11111111111 112367899999
Q ss_pred HHHHHHHHHhccCCCCCcEEEecCCC
Q 010075 310 NAMIVAMVAHAKQPSDANIYHVGSSL 335 (519)
Q Consensus 310 ~aii~a~~~~~~~~~~~~iyni~s~~ 335 (519)
++++.++.... ..-.++++++.+|.
T Consensus 215 ~~v~~l~s~~~-~~~tG~~i~vdgG~ 239 (263)
T 2a4k_A 215 QAALFLLSEES-AYITGQALYVDGGR 239 (263)
T ss_dssp HHHHHHHSGGG-TTCCSCEEEESTTT
T ss_pred HHHHHHhCccc-cCCcCCEEEECCCc
Confidence 99999886432 22247899998874
|
| >2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.73 E-value=2.7e-17 Score=161.64 Aligned_cols=228 Identities=17% Similarity=0.227 Sum_probs=146.8
Q ss_pred cCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 010075 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (519)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (519)
+++|+|+||||||+||++++++|++.| .+|+++.|+... .+.+.++ +.+.. ...++.+
T Consensus 5 ~~~k~vlVTGas~gIG~~ia~~l~~~G---~~V~~~~r~~~~---~~~~~~~---------l~~~~-------~~~~~~~ 62 (267)
T 2gdz_A 5 VNGKVALVTGAAQGIGRAFAEALLLKG---AKVALVDWNLEA---GVQCKAA---------LHEQF-------EPQKTLF 62 (267)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTT---CEEEEEESCHHH---HHHHHHH---------HTTTS-------CGGGEEE
T ss_pred cCCCEEEEECCCCcHHHHHHHHHHHCC---CEEEEEECCHHH---HHHHHHH---------HHhhc-------CCCceEE
Confidence 678999999999999999999999998 678999886421 1111111 11110 0246889
Q ss_pred EeccCCCCCCCCChhhhHHHHh-------cCccEEEEcCccCCccccHHHHHHHhHHHHHHHHHH----HHhcc--CCce
Q 010075 90 VPGDISSEDLGLKDSNLKEELW-------NELDIMVNSAAITKFDERYDVAFGINTLGVIHLVNF----AKKCV--KLKV 156 (519)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~-------~~vdiViH~Aa~v~f~~~~~~~~~~Nv~gt~~ll~~----a~~~~--~l~~ 156 (519)
+.+|++++ +..+.++ .++|+|||+||... .+.++..+++|+.|+..+.+. +++.+ +..+
T Consensus 63 ~~~D~~~~-------~~v~~~~~~~~~~~g~id~lv~~Ag~~~-~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~g~ 134 (267)
T 2gdz_A 63 IQCDVADQ-------QQLRDTFRKVVDHFGRLDILVNNAGVNN-EKNWEKTLQINLVSVISGTYLGLDYMSKQNGGEGGI 134 (267)
T ss_dssp EECCTTSH-------HHHHHHHHHHHHHHSCCCEEEECCCCCC-SSSHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEE
T ss_pred EecCCCCH-------HHHHHHHHHHHHHcCCCCEEEECCCCCC-hhhHHHHHhHHHHHHHHHHHHHHHHHHhccCCCCCE
Confidence 99999953 2223333 36899999999754 467888999999976665544 43321 1578
Q ss_pred EEEEecceeecCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcHHHHHHH
Q 010075 157 FVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKT 236 (519)
Q Consensus 157 ~V~vSTa~v~~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~Y~~sK~ 236 (519)
+|++||...+... .....|+.||+
T Consensus 135 iv~isS~~~~~~~--------------------------------------------------------~~~~~Y~~sK~ 158 (267)
T 2gdz_A 135 IINMSSLAGLMPV--------------------------------------------------------AQQPVYCASKH 158 (267)
T ss_dssp EEEECCGGGTSCC--------------------------------------------------------TTCHHHHHHHH
T ss_pred EEEeCCccccCCC--------------------------------------------------------CCCchHHHHHH
Confidence 9999998765321 12347999999
Q ss_pred HHHHHHHHh-------hcCCcEEEEecCccccCCCCCCCcccccccccHHHHHHhhcCCceeeccCCCceeeeeeHHHHH
Q 010075 237 MGEMLMQQS-------KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVV 309 (519)
Q Consensus 237 ~aE~lv~~~-------~~~lp~~IvRPs~V~g~~~~p~~gw~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~d~vpVDdva 309 (519)
..|.+.+.+ ..++++.+++||.|.++.......- ............. ..+.....+++++|+|
T Consensus 159 a~~~~~~~~ala~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~-~~~~~~~~~~~~~---------~~~~~~~~~~~~~dvA 228 (267)
T 2gdz_A 159 GIVGFTRSAALAANLMNSGVRLNAICPGFVNTAILESIEKE-ENMGQYIEYKDHI---------KDMIKYYGILDPPLIA 228 (267)
T ss_dssp HHHHHHHHHHHHHHHHTCCEEEEEEEESCBSSHHHHGGGCH-HHHGGGGGGHHHH---------HHHHHHHCCBCHHHHH
T ss_pred HHHHHHHHHHHHHHhccCCcEEEEEecCcCcchhhhccccc-cccchhhhHHHHH---------HHHhccccCCCHHHHH
Confidence 999887742 4589999999999976532110000 0000000000000 0001123468999999
Q ss_pred HHHHHHHHHhccCCCCCcEEEecCCCC
Q 010075 310 NAMIVAMVAHAKQPSDANIYHVGSSLR 336 (519)
Q Consensus 310 ~aii~a~~~~~~~~~~~~iyni~s~~~ 336 (519)
++++.++.... -.+++++++++..
T Consensus 229 ~~v~~l~s~~~---~~G~~~~v~gg~~ 252 (267)
T 2gdz_A 229 NGLITLIEDDA---LNGAIMKITTSKG 252 (267)
T ss_dssp HHHHHHHHCTT---CSSCEEEEETTTE
T ss_pred HHHHHHhcCcC---CCCcEEEecCCCc
Confidence 99999987432 2378999988754
|
| >2ekp_A 2-deoxy-D-gluconate 3-dehydrogenase; structural genomics, NPPSFA, nation project on protein structural and functional analyses; HET: NAD; 1.15A {Thermus thermophilus} PDB: 1x1e_A* 2ekq_A | Back alignment and structure |
|---|
Probab=99.73 E-value=2e-16 Score=152.86 Aligned_cols=217 Identities=12% Similarity=0.105 Sum_probs=147.0
Q ss_pred CCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEEe
Q 010075 12 NKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVP 91 (519)
Q Consensus 12 ~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v~ 91 (519)
+|+|+||||||+||++++++|++.| .+|+++.|+... +.++ . .+.++.
T Consensus 2 ~k~vlVTGas~giG~~~a~~l~~~G---~~V~~~~r~~~~------~~~~---------------------~--~~~~~~ 49 (239)
T 2ekp_A 2 ERKALVTGGSRGIGRAIAEALVARG---YRVAIASRNPEE------AAQS---------------------L--GAVPLP 49 (239)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTT---CEEEEEESSCHH------HHHH---------------------H--TCEEEE
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCC---CEEEEEeCCHHH------HHHh---------------------h--CcEEEe
Confidence 6899999999999999999999998 678999997532 1110 0 267889
Q ss_pred ccCCCCCCCCChhhhHHH---HhcCccEEEEcCccCCc-------cccHHHHHHHhHHHHHHHHHHHHhc---cCCceEE
Q 010075 92 GDISSEDLGLKDSNLKEE---LWNELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKC---VKLKVFV 158 (519)
Q Consensus 92 gDl~~~~lgls~~~~~~~---l~~~vdiViH~Aa~v~f-------~~~~~~~~~~Nv~gt~~ll~~a~~~---~~l~~~V 158 (519)
+|+++ .- ..+..+. ...++|++||+||.... .+.++..+++|+.|+.++++.+.+. .+..++|
T Consensus 50 ~D~~~-~~---~~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~g~iv 125 (239)
T 2ekp_A 50 TDLEK-DD---PKGLVKRALEALGGLHVLVHAAAVNVRKPALELSYEEWRRVLYLHLDVAFLLAQAAAPHMAEAGWGRVL 125 (239)
T ss_dssp CCTTT-SC---HHHHHHHHHHHHTSCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEE
T ss_pred cCCch-HH---HHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEE
Confidence 99996 21 1222222 23579999999997532 2467888999999999998887431 2568999
Q ss_pred EEecceeecCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcHHHHHHHHH
Q 010075 159 HVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMG 238 (519)
Q Consensus 159 ~vSTa~v~~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~Y~~sK~~a 238 (519)
++||...+.... . .....|+.||+..
T Consensus 126 ~isS~~~~~~~~-----------~-------------------------------------------~~~~~Y~~sK~a~ 151 (239)
T 2ekp_A 126 FIGSVTTFTAGG-----------P-------------------------------------------VPIPAYTTAKTAL 151 (239)
T ss_dssp EECCGGGTSCCT-----------T-------------------------------------------SCCHHHHHHHHHH
T ss_pred EECchhhccCCC-----------C-------------------------------------------CCCccHHHHHHHH
Confidence 999987654210 0 1245799999999
Q ss_pred HHHHHHh-----hcCCcEEEEecCccccCCCCCCCcccccccccHHHHHHhhcCCceeeccCCCceeeeeeHHHHHHHHH
Q 010075 239 EMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMI 313 (519)
Q Consensus 239 E~lv~~~-----~~~lp~~IvRPs~V~g~~~~p~~gw~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~d~vpVDdva~aii 313 (519)
|.+.+.. ..++++.++|||.|.++..... ............. .....+...+|+|++++
T Consensus 152 ~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~-------~~~~~~~~~~~~~---------~p~~~~~~~~dvA~~~~ 215 (239)
T 2ekp_A 152 LGLTRALAKEWARLGIRVNLLCPGYVETEFTLPL-------RQNPELYEPITAR---------IPMGRWARPEEIARVAA 215 (239)
T ss_dssp HHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHH-------HTCHHHHHHHHTT---------CTTSSCBCHHHHHHHHH
T ss_pred HHHHHHHHHHhhhcCcEEEEEEeCCccCchhhcc-------ccCHHHHHHHHhc---------CCCCCCcCHHHHHHHHH
Confidence 9888765 3489999999999987643110 0001111111111 11124678999999999
Q ss_pred HHHHHhccCCCCCcEEEecCCC
Q 010075 314 VAMVAHAKQPSDANIYHVGSSL 335 (519)
Q Consensus 314 ~a~~~~~~~~~~~~iyni~s~~ 335 (519)
.++.... ..-.++++++.+|.
T Consensus 216 ~l~s~~~-~~~tG~~~~vdgG~ 236 (239)
T 2ekp_A 216 VLCGDEA-EYLTGQAVAVDGGF 236 (239)
T ss_dssp HHTSGGG-TTCCSCEEEESTTT
T ss_pred HHcCchh-cCCCCCEEEECCCc
Confidence 8885432 22246889998773
|
| >3icc_A Putative 3-oxoacyl-(acyl carrier protein) reducta; structural genomics, putative 3-oxoacyl-(acyl carrier protei reductase, oxidoreductase; HET: NAP MES; 1.87A {Bacillus anthracis str} | Back alignment and structure |
|---|
Probab=99.73 E-value=1.6e-16 Score=154.74 Aligned_cols=224 Identities=13% Similarity=0.119 Sum_probs=150.0
Q ss_pred hcCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceE
Q 010075 9 FLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKIT 88 (519)
Q Consensus 9 ~~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~ 88 (519)
.++||+|+||||+|+||++++++|++.| .+|+++.+..... .++..+++ .+. ..++.
T Consensus 4 ~l~~k~vlITGas~gIG~~~a~~l~~~G---~~v~~~~~~~~~~--~~~~~~~~---------~~~---------~~~~~ 60 (255)
T 3icc_A 4 MLKGKVALVTGASRGIGRAIAKRLANDG---ALVAIHYGNRKEE--AEETVYEI---------QSN---------GGSAF 60 (255)
T ss_dssp TTTTCEEEETTCSSHHHHHHHHHHHHTT---CEEEEEESSCSHH--HHHHHHHH---------HHT---------TCEEE
T ss_pred ccCCCEEEEECCCChHHHHHHHHHHHCC---CeEEEEeCCchHH--HHHHHHHH---------Hhc---------CCceE
Confidence 3679999999999999999999999998 5777765543321 12211111 111 25788
Q ss_pred EEeccCCCCCCCCChhhhHHHHhc-------------CccEEEEcCccCCc-------cccHHHHHHHhHHHHHHHHHHH
Q 010075 89 FVPGDISSEDLGLKDSNLKEELWN-------------ELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFA 148 (519)
Q Consensus 89 ~v~gDl~~~~lgls~~~~~~~l~~-------------~vdiViH~Aa~v~f-------~~~~~~~~~~Nv~gt~~ll~~a 148 (519)
++.+|++++ +..+.+.+ .+|++||+||.... .+.++..+++|+.|+..+++.+
T Consensus 61 ~~~~D~~~~-------~~~~~~~~~~~~~~~~~~~~~~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~ 133 (255)
T 3icc_A 61 SIGANLESL-------HGVEALYSSLDNELQNRTGSTKFDILINNAGIGPGAFIEETTEQFFDRMVSVNAKAPFFIIQQA 133 (255)
T ss_dssp EEECCTTSH-------HHHHHHHHHHHHHHHHHHSSSCEEEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHH
T ss_pred EEecCcCCH-------HHHHHHHHHHHHHhcccccCCcccEEEECCCCCCCCChhhCCHHHHHHHHhhhchHHHHHHHHH
Confidence 999999953 22223222 39999999997532 2456778999999999999998
Q ss_pred Hhc-cCCceEEEEecceeecCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCC
Q 010075 149 KKC-VKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGW 227 (519)
Q Consensus 149 ~~~-~~l~~~V~vSTa~v~~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~ 227 (519)
... .+-.++|++||....... +.
T Consensus 134 ~~~~~~~~~iv~isS~~~~~~~--------------------------------------------------------~~ 157 (255)
T 3icc_A 134 LSRLRDNSRIINISSAATRISL--------------------------------------------------------PD 157 (255)
T ss_dssp TTTEEEEEEEEEECCGGGTSCC--------------------------------------------------------TT
T ss_pred HHhhCCCCEEEEeCChhhccCC--------------------------------------------------------CC
Confidence 753 234589999997654321 22
Q ss_pred CcHHHHHHHHHHHHHHHh-----hcCCcEEEEecCccccCCCCCCCcccccccccHHHHHHhhcCCceeeccCCCceeee
Q 010075 228 PNTYVFTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDV 302 (519)
Q Consensus 228 ~n~Y~~sK~~aE~lv~~~-----~~~lp~~IvRPs~V~g~~~~p~~gw~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~d~ 302 (519)
...|+.||+..+.+.+.. ..++.+..++||.|.++....... .......... ......+
T Consensus 158 ~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~-------~~~~~~~~~~---------~~~~~~~ 221 (255)
T 3icc_A 158 FIAYSMTKGAINTMTFTLAKQLGARGITVNAILPGFVKTDMNAELLS-------DPMMKQYATT---------ISAFNRL 221 (255)
T ss_dssp BHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCCSSSTTTTT-------SHHHHHHHHH---------TSTTSSC
T ss_pred cchhHHhHHHHHHHHHHHHHHHHhcCeEEEEEEEeeecccchhhhcc-------cHHHHHhhhc---------cCCcCCC
Confidence 357999999999888754 357999999999998775432211 0111111111 1122346
Q ss_pred eeHHHHHHHHHHHHHHhccCCCCCcEEEecCCC
Q 010075 303 IPVDMVVNAMIVAMVAHAKQPSDANIYHVGSSL 335 (519)
Q Consensus 303 vpVDdva~aii~a~~~~~~~~~~~~iyni~s~~ 335 (519)
..++|+|++++.++.... ..-.++++++.+|.
T Consensus 222 ~~~~dva~~~~~l~s~~~-~~~tG~~i~vdgG~ 253 (255)
T 3icc_A 222 GEVEDIADTAAFLASPDS-RWVTGQLIDVSGGS 253 (255)
T ss_dssp BCHHHHHHHHHHHHSGGG-TTCCSCEEEESSST
T ss_pred CCHHHHHHHHHHHhCccc-CCccCCEEEecCCe
Confidence 789999999998886432 22247899998873
|
| >1fjh_A 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase; short chain dehydrogenase, SDR, xenobiotic, metyrapone, oligomerisation; 1.68A {Comamonas testosteroni} SCOP: c.2.1.2 PDB: 1fk8_A* | Back alignment and structure |
|---|
Probab=99.73 E-value=4.7e-17 Score=158.65 Aligned_cols=233 Identities=9% Similarity=0.023 Sum_probs=141.7
Q ss_pred CEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEEec
Q 010075 13 KTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVPG 92 (519)
Q Consensus 13 k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v~g 92 (519)
|+|+||||||+||++++++|++.| .+|+++.|+..... . .+.+
T Consensus 2 k~vlVTGas~gIG~~~a~~l~~~G---~~V~~~~r~~~~~~-------------------------------~---~~~~ 44 (257)
T 1fjh_A 2 SIIVISGCATGIGAATRKVLEAAG---HQIVGIDIRDAEVI-------------------------------A---DLST 44 (257)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTT---CEEEEEESSSSSEE-------------------------------C---CTTS
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCC---CEEEEEeCCchhhc-------------------------------c---cccc
Confidence 689999999999999999999998 67899998753210 1 1567
Q ss_pred cCCCCCCCCChhhhHHHHh----cCccEEEEcCccCCccccHHHHHHHhHHHHHHHHHHHHhc---cCCceEEEEeccee
Q 010075 93 DISSEDLGLKDSNLKEELW----NELDIMVNSAAITKFDERYDVAFGINTLGVIHLVNFAKKC---VKLKVFVHVSTAYV 165 (519)
Q Consensus 93 Dl~~~~lgls~~~~~~~l~----~~vdiViH~Aa~v~f~~~~~~~~~~Nv~gt~~ll~~a~~~---~~l~~~V~vSTa~v 165 (519)
|++ +.+..+.++ .++|+|||+||......+++..+++|+.|+.++++++.+. .+..++|++||...
T Consensus 45 Dl~-------~~~~v~~~~~~~~~~id~lv~~Ag~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~ 117 (257)
T 1fjh_A 45 AEG-------RKQAIADVLAKCSKGMDGLVLCAGLGPQTKVLGNVVSVNYFGATELMDAFLPALKKGHQPAAVVISSVAS 117 (257)
T ss_dssp HHH-------HHHHHHHHHTTCTTCCSEEEECCCCCTTCSSHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGG
T ss_pred CCC-------CHHHHHHHHHHhCCCCCEEEECCCCCCCcccHHHHHHHhhHHHHHHHHHHHHHHhhcCCcEEEEECChhh
Confidence 887 444444555 3569999999987645679999999999999999988642 24579999999877
Q ss_pred ecCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcHHHHHHHHHHHHHHHh
Q 010075 166 AGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLMQQS 245 (519)
Q Consensus 166 ~~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~Y~~sK~~aE~lv~~~ 245 (519)
+...... + +.+... . ..+.+.......+. ........|+.||+..|.+++..
T Consensus 118 ~~~~~~~----------~-~~~~~~--~----------~~~~~~~~~~~~~~-----~~~~~~~~Y~~sK~a~~~~~~~l 169 (257)
T 1fjh_A 118 AHLAFDK----------N-PLALAL--E----------AGEEAKARAIVEHA-----GEQGGNLAYAGSKNALTVAVRKR 169 (257)
T ss_dssp GSSCGGG----------C-TTHHHH--H----------HTCHHHHHHHHHTC-----CTTHHHHHHHHHHHHHHHHHHHT
T ss_pred hcccccc----------c-hhhhhh--c----------ccchhhhhhhhhcc-----cCCCCccHHHHHHHHHHHHHHHH
Confidence 6321100 0 000000 0 00111111000000 00012357999999999998765
Q ss_pred -----hcCCcEEEEecCccccCCCCCC-CcccccccccHHHHHHhhcCCceeeccCCCceeeeeeHHHHHHHHHHHHHHh
Q 010075 246 -----KENLSLVIIRPTVVSGTYKEPF-PGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMIVAMVAH 319 (519)
Q Consensus 246 -----~~~lp~~IvRPs~V~g~~~~p~-~gw~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~d~vpVDdva~aii~a~~~~ 319 (519)
..++.+++++||.|.++..... +. ......... + ......+++++|+|++++.++...
T Consensus 170 a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~---------~~~~~~~~~----~---~~~~~~~~~~~dvA~~~~~l~~~~ 233 (257)
T 1fjh_A 170 AAAWGEAGVRLNTIAPGATETPLLQAGLQD---------PRYGESIAK----F---VPPMGRRAEPSEMASVIAFLMSPA 233 (257)
T ss_dssp HHHHHHTTCEEEEEEECC----------------------------------C---CCSTTSCCCTHHHHHHHHHHTSGG
T ss_pred HHHHhhcCeEEEEEeeCCCCCccchhhccc---------hhHHHHHHh----c---ccccCCCCCHHHHHHHHHHHhCch
Confidence 3579999999999987653211 00 000000000 0 011124688999999999988643
Q ss_pred ccCCCCCcEEEecCC
Q 010075 320 AKQPSDANIYHVGSS 334 (519)
Q Consensus 320 ~~~~~~~~iyni~s~ 334 (519)
.. .-.++++++.+|
T Consensus 234 ~~-~~tG~~~~vdgG 247 (257)
T 1fjh_A 234 AS-YVHGAQIVIDGG 247 (257)
T ss_dssp GT-TCCSCEEEESTT
T ss_pred hc-CCcCCEEEECCC
Confidence 22 224788999877
|
| >3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum} | Back alignment and structure |
|---|
Probab=99.73 E-value=1e-16 Score=156.09 Aligned_cols=200 Identities=12% Similarity=0.050 Sum_probs=143.8
Q ss_pred CCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEEe
Q 010075 12 NKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVP 91 (519)
Q Consensus 12 ~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v~ 91 (519)
+|+|+||||+|+||++++++|++.| .+|+++.|+.... .-..+.
T Consensus 22 ~k~vlITGas~gIG~~la~~l~~~G---~~V~~~~r~~~~~---------------------------------~~~~~~ 65 (251)
T 3orf_A 22 SKNILVLGGSGALGAEVVKFFKSKS---WNTISIDFRENPN---------------------------------ADHSFT 65 (251)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTT---CEEEEEESSCCTT---------------------------------SSEEEE
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCC---CEEEEEeCCcccc---------------------------------cccceE
Confidence 7899999999999999999999998 6789999986432 113467
Q ss_pred ccCCCCCCCCChhhhHHHHh-------cCccEEEEcCccCCc--------cccHHHHHHHhHHHHHHHHHHHHhc-cCCc
Q 010075 92 GDISSEDLGLKDSNLKEELW-------NELDIMVNSAAITKF--------DERYDVAFGINTLGVIHLVNFAKKC-VKLK 155 (519)
Q Consensus 92 gDl~~~~lgls~~~~~~~l~-------~~vdiViH~Aa~v~f--------~~~~~~~~~~Nv~gt~~ll~~a~~~-~~l~ 155 (519)
+|+++ .+..+.++ .++|+|||+||.... .+.++..+++|+.|+.++++.+.+. .+-.
T Consensus 66 ~d~~d-------~~~v~~~~~~~~~~~g~iD~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g 138 (251)
T 3orf_A 66 IKDSG-------EEEIKSVIEKINSKSIKVDTFVCAAGGWSGGNASSDEFLKSVKGMIDMNLYSAFASAHIGAKLLNQGG 138 (251)
T ss_dssp CSCSS-------HHHHHHHHHHHHTTTCCEEEEEECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEE
T ss_pred EEeCC-------HHHHHHHHHHHHHHcCCCCEEEECCccCCCCCcccccCHHHHHHHHHHHhHHHHHHHHHHHHhhccCC
Confidence 78774 33233333 258999999996421 2567788999999999999998763 2235
Q ss_pred eEEEEecceeecCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcHHHHHH
Q 010075 156 VFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTK 235 (519)
Q Consensus 156 ~~V~vSTa~v~~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~Y~~sK 235 (519)
++|++||...+... .....|+.||
T Consensus 139 ~iv~isS~~~~~~~--------------------------------------------------------~~~~~Y~~sK 162 (251)
T 3orf_A 139 LFVLTGASAALNRT--------------------------------------------------------SGMIAYGATK 162 (251)
T ss_dssp EEEEECCGGGGSCC--------------------------------------------------------TTBHHHHHHH
T ss_pred EEEEEechhhccCC--------------------------------------------------------CCCchhHHHH
Confidence 89999998654211 2245799999
Q ss_pred HHHHHHHHHh--h-----cCCcEEEEecCccccCCCCCCCcccccccccHHHHHHhhcCCceeeccCCCceeeeeeHHHH
Q 010075 236 TMGEMLMQQS--K-----ENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMV 308 (519)
Q Consensus 236 ~~aE~lv~~~--~-----~~lp~~IvRPs~V~g~~~~p~~gw~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~d~vpVDdv 308 (519)
+..|.+++.+ . .++.+.+++||.|.++... ... .......+++++|+
T Consensus 163 aa~~~~~~~la~e~~~~~~gi~v~~v~PG~v~t~~~~-----------------~~~---------~~~~~~~~~~~~dv 216 (251)
T 3orf_A 163 AATHHIIKDLASENGGLPAGSTSLGILPVTLDTPTNR-----------------KYM---------SDANFDDWTPLSEV 216 (251)
T ss_dssp HHHHHHHHHHTSTTSSSCTTCEEEEEEESCBCCHHHH-----------------HHC---------TTSCGGGSBCHHHH
T ss_pred HHHHHHHHHHHHHhcccCCCcEEEEEecCcCcCcchh-----------------hhc---------ccccccccCCHHHH
Confidence 9999999865 2 4689999999988664221 110 11123457889999
Q ss_pred HHHHHHHHHHhccCCCCCcEEEecCCCC
Q 010075 309 VNAMIVAMVAHAKQPSDANIYHVGSSLR 336 (519)
Q Consensus 309 a~aii~a~~~~~~~~~~~~iyni~s~~~ 336 (519)
|++++.++..+....-.++++++.++..
T Consensus 217 a~~i~~l~~~~~~~~~tG~~i~v~~g~~ 244 (251)
T 3orf_A 217 AEKLFEWSTNSDSRPTNGSLVKFETKSK 244 (251)
T ss_dssp HHHHHHHHHCGGGCCCTTCEEEEEEETT
T ss_pred HHHHHHHhcCccccCCcceEEEEecCCc
Confidence 9999999976222333478999877644
|
| >3p19_A BFPVVD8, putative blue fluorescent protein; rossmann-fold, oxidoreductase; HET: NAP; 2.05A {Vibrio vulnificus} | Back alignment and structure |
|---|
Probab=99.72 E-value=1.2e-16 Score=157.23 Aligned_cols=202 Identities=14% Similarity=0.144 Sum_probs=139.3
Q ss_pred hcCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceE
Q 010075 9 FLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKIT 88 (519)
Q Consensus 9 ~~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~ 88 (519)
-+.+|+|+||||+|+||+++++.|++.| .+|+++.|+. ++++ .....++.
T Consensus 13 ~~~~k~vlVTGas~gIG~aia~~l~~~G---~~V~~~~r~~------~~~~---------------------~~~~~~~~ 62 (266)
T 3p19_A 13 GSMKKLVVITGASSGIGEAIARRFSEEG---HPLLLLARRV------ERLK---------------------ALNLPNTL 62 (266)
T ss_dssp --CCCEEEEESTTSHHHHHHHHHHHHTT---CCEEEEESCH------HHHH---------------------TTCCTTEE
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHCC---CEEEEEECCH------HHHH---------------------HhhcCCce
Confidence 3678999999999999999999999999 5678888863 1221 01124788
Q ss_pred EEeccCCCCCCCCChhhhHHHHh-------cCccEEEEcCccCCc-------cccHHHHHHHhHHHHHHHHHHHHhc---
Q 010075 89 FVPGDISSEDLGLKDSNLKEELW-------NELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKC--- 151 (519)
Q Consensus 89 ~v~gDl~~~~lgls~~~~~~~l~-------~~vdiViH~Aa~v~f-------~~~~~~~~~~Nv~gt~~ll~~a~~~--- 151 (519)
++.+|++++ +..+.++ .++|++||+||.... .+.++..+++|+.|+.++++.+...
T Consensus 63 ~~~~Dv~d~-------~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~ 135 (266)
T 3p19_A 63 CAQVDVTDK-------YTFDTAITRAEKIYGPADAIVNNAGMMLLGQIDTQEANEWQRMFDVNVLGLLNGMQAVLAPMKA 135 (266)
T ss_dssp EEECCTTCH-------HHHHHHHHHHHHHHCSEEEEEECCCCCCCCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHH
T ss_pred EEEecCCCH-------HHHHHHHHHHHHHCCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHh
Confidence 999999953 2223333 379999999997632 2567788999999999987766421
Q ss_pred cCCceEEEEecceeecCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcHH
Q 010075 152 VKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTY 231 (519)
Q Consensus 152 ~~l~~~V~vSTa~v~~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~Y 231 (519)
.+..++|++||...+... .....|
T Consensus 136 ~~~g~IV~isS~~~~~~~--------------------------------------------------------~~~~~Y 159 (266)
T 3p19_A 136 RNCGTIINISSIAGKKTF--------------------------------------------------------PDHAAY 159 (266)
T ss_dssp HTCCEEEEECCGGGTSCC--------------------------------------------------------TTCHHH
T ss_pred cCCcEEEEEcChhhCCCC--------------------------------------------------------CCCchH
Confidence 256799999998654311 223579
Q ss_pred HHHHHHHHHHHHHh-----hcCCcEEEEecCccccCCCCCCCcccccccccHHHHHHhhcCCceeeccCCCceeeeeeHH
Q 010075 232 VFTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVD 306 (519)
Q Consensus 232 ~~sK~~aE~lv~~~-----~~~lp~~IvRPs~V~g~~~~p~~gw~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~d~vpVD 306 (519)
+.||+..+.+.+.+ ..++++..++||.|.++....... ........... .....++.++
T Consensus 160 ~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~--------~~~~~~~~~~~--------~~~~r~~~pe 223 (266)
T 3p19_A 160 CGTKFAVHAISENVREEVAASNVRVMTIAPSAVKTELLSHTTS--------QQIKDGYDAWR--------VDMGGVLAAD 223 (266)
T ss_dssp HHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBSSSGGGGCSC--------HHHHHHHHHHH--------HHTTCCBCHH
T ss_pred HHHHHHHHHHHHHHHHHhcccCcEEEEEeeCccccchhhcccc--------hhhhHHHHhhc--------ccccCCCCHH
Confidence 99999999888755 358999999999998765321110 01111100000 0112468899
Q ss_pred HHHHHHHHHHHHh
Q 010075 307 MVVNAMIVAMVAH 319 (519)
Q Consensus 307 dva~aii~a~~~~ 319 (519)
|||++++.++...
T Consensus 224 dvA~av~~l~~~~ 236 (266)
T 3p19_A 224 DVARAVLFAYQQP 236 (266)
T ss_dssp HHHHHHHHHHHSC
T ss_pred HHHHHHHHHHcCC
Confidence 9999999998743
|
| >3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris} | Back alignment and structure |
|---|
Probab=99.72 E-value=2.1e-16 Score=154.17 Aligned_cols=204 Identities=11% Similarity=0.059 Sum_probs=132.5
Q ss_pred cCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 010075 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (519)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (519)
+++|+++||||+|+||++++++|++.| .+|+++.|+..... ++.+++ ++. ..++.+
T Consensus 5 ~~~k~vlVTGas~GIG~aia~~l~~~G---~~V~~~~r~~~~~~---~~~~~~---------~~~---------~~~~~~ 60 (252)
T 3h7a_A 5 PRNATVAVIGAGDYIGAEIAKKFAAEG---FTVFAGRRNGEKLA---PLVAEI---------EAA---------GGRIVA 60 (252)
T ss_dssp CCSCEEEEECCSSHHHHHHHHHHHHTT---CEEEEEESSGGGGH---HHHHHH---------HHT---------TCEEEE
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCC---CEEEEEeCCHHHHH---HHHHHH---------Hhc---------CCeEEE
Confidence 578999999999999999999999998 67899999754322 222111 111 257899
Q ss_pred EeccCCCCCCCCChhhhHHHHh------cCccEEEEcCccCCc-------cccHHHHHHHhHHHHHHHHHHHHhc---cC
Q 010075 90 VPGDISSEDLGLKDSNLKEELW------NELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKC---VK 153 (519)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~------~~vdiViH~Aa~v~f-------~~~~~~~~~~Nv~gt~~ll~~a~~~---~~ 153 (519)
+.+|++++ +..+.++ .++|++||+||.... .+.++..+++|+.|+..+++.+... .+
T Consensus 61 ~~~Dv~~~-------~~v~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~ 133 (252)
T 3h7a_A 61 RSLDARNE-------DEVTAFLNAADAHAPLEVTIFNVGANVNFPILETTDRVFRKVWEMACWAGFVSGRESARLMLAHG 133 (252)
T ss_dssp EECCTTCH-------HHHHHHHHHHHHHSCEEEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT
T ss_pred EECcCCCH-------HHHHHHHHHHHhhCCceEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC
Confidence 99999963 3233443 378999999997542 2567888999999999988877431 24
Q ss_pred CceEEEEecceeecCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcHHHH
Q 010075 154 LKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVF 233 (519)
Q Consensus 154 l~~~V~vSTa~v~~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~Y~~ 233 (519)
..++|++||....... .....|+.
T Consensus 134 ~g~iv~isS~~~~~~~--------------------------------------------------------~~~~~Y~a 157 (252)
T 3h7a_A 134 QGKIFFTGATASLRGG--------------------------------------------------------SGFAAFAS 157 (252)
T ss_dssp CEEEEEEEEGGGTCCC--------------------------------------------------------TTCHHHHH
T ss_pred CcEEEEECCHHHcCCC--------------------------------------------------------CCCccHHH
Confidence 5789999997643211 22357999
Q ss_pred HHHHHHHHHHHh-----hcCCcE-EEEecCccccCCCCCCCcccccccccHHHHHHhhcCCceeeccCCCceeeeeeHHH
Q 010075 234 TKTMGEMLMQQS-----KENLSL-VIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDM 307 (519)
Q Consensus 234 sK~~aE~lv~~~-----~~~lp~-~IvRPs~V~g~~~~p~~gw~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~d~vpVDd 307 (519)
||+..+.+.+.. ..++.+ .++.||.|..+...... . ..... ........ ++..+|
T Consensus 158 sKaa~~~l~~~la~e~~~~gi~v~n~v~PG~v~T~~~~~~~---~------~~~~~---------~~~~~~~~-~~~ped 218 (252)
T 3h7a_A 158 AKFGLRAVAQSMARELMPKNIHVAHLIIDSGVDTAWVRERR---E------QMFGK---------DALANPDL-LMPPAA 218 (252)
T ss_dssp HHHHHHHHHHHHHHHHGGGTEEEEEEEEC----------------------------------------------CCHHH
T ss_pred HHHHHHHHHHHHHHHhhhcCCEEEEEecCCccCChhhhccc---h------hhhhh---------hhhcCCcc-CCCHHH
Confidence 999999888754 357899 89999998765432110 0 00000 01111223 789999
Q ss_pred HHHHHHHHHHHh
Q 010075 308 VVNAMIVAMVAH 319 (519)
Q Consensus 308 va~aii~a~~~~ 319 (519)
+|++++.++...
T Consensus 219 vA~~~~~l~s~~ 230 (252)
T 3h7a_A 219 VAGAYWQLYQQP 230 (252)
T ss_dssp HHHHHHHHHHCC
T ss_pred HHHHHHHHHhCc
Confidence 999999998743
|
| >1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1dir_A* 1hdr_A* | Back alignment and structure |
|---|
Probab=99.72 E-value=1.1e-16 Score=154.95 Aligned_cols=203 Identities=11% Similarity=0.058 Sum_probs=143.1
Q ss_pred cCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 010075 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (519)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (519)
.++|+|+||||||+||++++++|++.| .+|+++.|+.... .....+
T Consensus 5 ~~~k~vlVTGas~gIG~~ia~~l~~~G---~~V~~~~r~~~~~-------------------------------~~~~~~ 50 (241)
T 1dhr_A 5 GEARRVLVYGGRGALGSRCVQAFRARN---WWVASIDVVENEE-------------------------------ASASVI 50 (241)
T ss_dssp -CCCEEEEETTTSHHHHHHHHHHHTTT---CEEEEEESSCCTT-------------------------------SSEEEE
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHhCC---CEEEEEeCChhhc-------------------------------cCCcEE
Confidence 468999999999999999999999998 6789999976432 123567
Q ss_pred EeccCCCCCCCCChhhhHHHHh---------cCccEEEEcCccCC---c-----cccHHHHHHHhHHHHHHHHHHHHhc-
Q 010075 90 VPGDISSEDLGLKDSNLKEELW---------NELDIMVNSAAITK---F-----DERYDVAFGINTLGVIHLVNFAKKC- 151 (519)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~---------~~vdiViH~Aa~v~---f-----~~~~~~~~~~Nv~gt~~ll~~a~~~- 151 (519)
+.+|+++ .+..+.++ .++|++||+||... + .+.++..+++|+.|+..+++.+.+.
T Consensus 51 ~~~D~~~-------~~~v~~~~~~~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~ 123 (241)
T 1dhr_A 51 VKMTDSF-------TEQADQVTAEVGKLLGDQKVDAILCVAGGWAGGNAKSKSLFKNCDLMWKQSIWTSTISSHLATKHL 123 (241)
T ss_dssp CCCCSCH-------HHHHHHHHHHHHHHHTTCCEEEEEECCCCCCCBCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHE
T ss_pred EEcCCCC-------HHHHHHHHHHHHHHhCCCCCCEEEEcccccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHhh
Confidence 8899994 33333333 37999999999753 1 2456778999999999999988653
Q ss_pred cCCceEEEEecceeecCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcHH
Q 010075 152 VKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTY 231 (519)
Q Consensus 152 ~~l~~~V~vSTa~v~~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~Y 231 (519)
.+-.++|++||...+... .....|
T Consensus 124 ~~~g~iv~isS~~~~~~~--------------------------------------------------------~~~~~Y 147 (241)
T 1dhr_A 124 KEGGLLTLAGAKAALDGT--------------------------------------------------------PGMIGY 147 (241)
T ss_dssp EEEEEEEEECCGGGGSCC--------------------------------------------------------TTBHHH
T ss_pred ccCCEEEEECCHHHccCC--------------------------------------------------------CCchHH
Confidence 223589999998654311 123579
Q ss_pred HHHHHHHHHHHHHh----h---cCCcEEEEecCccccCCCCCCCcccccccccHHHHHHhhcCCceeeccCCCceeeeee
Q 010075 232 VFTKTMGEMLMQQS----K---ENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIP 304 (519)
Q Consensus 232 ~~sK~~aE~lv~~~----~---~~lp~~IvRPs~V~g~~~~p~~gw~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~d~vp 304 (519)
+.||+..+.+.+.. . .++++.+++||.|-.+... ..... ......+|
T Consensus 148 ~asK~a~~~~~~~la~e~~~~~~gi~v~~v~PG~v~T~~~~-----------------~~~~~---------~~~~~~~~ 201 (241)
T 1dhr_A 148 GMAKGAVHQLCQSLAGKNSGMPSGAAAIAVLPVTLDTPMNR-----------------KSMPE---------ADFSSWTP 201 (241)
T ss_dssp HHHHHHHHHHHHHHTSTTSSCCTTCEEEEEEESCEECHHHH-----------------HHSTT---------SCGGGSEE
T ss_pred HHHHHHHHHHHHHHHHHhccCCCCeEEEEEecCcccCcccc-----------------ccCcc---------hhhccCCC
Confidence 99999999998865 2 3599999999987553210 00000 11224578
Q ss_pred HHHHHHHHHHHHHHhccCCCCCcEEEecCCCC
Q 010075 305 VDMVVNAMIVAMVAHAKQPSDANIYHVGSSLR 336 (519)
Q Consensus 305 VDdva~aii~a~~~~~~~~~~~~iyni~s~~~ 336 (519)
.+|+|++++.++.... ..-.++++++.++..
T Consensus 202 ~~~vA~~v~~l~~~~~-~~~~G~~~~v~g~~~ 232 (241)
T 1dhr_A 202 LEFLVETFHDWITGNK-RPNSGSLIQVVTTDG 232 (241)
T ss_dssp HHHHHHHHHHHHTTTT-CCCTTCEEEEEEETT
T ss_pred HHHHHHHHHHHhcCCC-cCccceEEEEeCCCC
Confidence 9999999998885322 222467888876543
|
| >3e9n_A Putative short-chain dehydrogenase/reductase; structural genomics, unknown function, oxidoreductase, PSI- 2; 2.40A {Corynebacterium glutamicum} | Back alignment and structure |
|---|
Probab=99.72 E-value=1.6e-17 Score=161.08 Aligned_cols=210 Identities=16% Similarity=0.172 Sum_probs=126.8
Q ss_pred cCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 010075 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (519)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (519)
++||+|+||||+|+||++++++|++ + .+|+++.|+... .+.+. + ..++.+
T Consensus 3 l~~k~vlITGas~gIG~~~a~~l~~-g---~~v~~~~r~~~~---~~~~~-------------~----------~~~~~~ 52 (245)
T 3e9n_A 3 LKKKIAVVTGATGGMGIEIVKDLSR-D---HIVYALGRNPEH---LAALA-------------E----------IEGVEP 52 (245)
T ss_dssp ---CEEEEESTTSHHHHHHHHHHTT-T---SEEEEEESCHHH---HHHHH-------------T----------STTEEE
T ss_pred CCCCEEEEEcCCCHHHHHHHHHHhC-C---CeEEEEeCCHHH---HHHHH-------------h----------hcCCcc
Confidence 4689999999999999999999987 6 578888886321 11111 0 146889
Q ss_pred EeccCCCCCCCCChhhhHHHHhcCccEEEEcCccCCc-------cccHHHHHHHhHHHHHHHHHHHHhc--cCCceEEEE
Q 010075 90 VPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKC--VKLKVFVHV 160 (519)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~~~vdiViH~Aa~v~f-------~~~~~~~~~~Nv~gt~~ll~~a~~~--~~l~~~V~v 160 (519)
+.+|++++..--...+.. .-..++|+|||+||.... .+.++..+++|+.|+..+++.+... ++-.++|++
T Consensus 53 ~~~D~~~~~~~~~~~~~~-~~~~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~g~iv~i 131 (245)
T 3e9n_A 53 IESDIVKEVLEEGGVDKL-KNLDHVDTLVHAAAVARDTTIEAGSVAEWHAHLDLNVIVPAELSRQLLPALRAASGCVIYI 131 (245)
T ss_dssp EECCHHHHHHTSSSCGGG-TTCSCCSEEEECC----------CHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEE
T ss_pred eecccchHHHHHHHHHHH-HhcCCCCEEEECCCcCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcCCeEEEE
Confidence 999998542100001111 122479999999998642 2456788999999988888776431 112689999
Q ss_pred ecceeecCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcHHHHHHHHHHH
Q 010075 161 STAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEM 240 (519)
Q Consensus 161 STa~v~~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~Y~~sK~~aE~ 240 (519)
||...+... .....|+.||+..|.
T Consensus 132 sS~~~~~~~--------------------------------------------------------~~~~~Y~asK~a~~~ 155 (245)
T 3e9n_A 132 NSGAGNGPH--------------------------------------------------------PGNTIYAASKHALRG 155 (245)
T ss_dssp C------------------------------------------------------------------CHHHHHHHHHHHH
T ss_pred cCcccccCC--------------------------------------------------------CCchHHHHHHHHHHH
Confidence 998765421 124579999999999
Q ss_pred HHHHh-----hcCCcEEEEecCccccCCCCCCCcccccccccHHHHHHhhcCCceeeccCCCceeeeeeHHHHHHHHHHH
Q 010075 241 LMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMIVA 315 (519)
Q Consensus 241 lv~~~-----~~~lp~~IvRPs~V~g~~~~p~~gw~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~d~vpVDdva~aii~a 315 (519)
+++.+ ..++++.+++||.|.++...... +. . +.......++.++|+|++++.+
T Consensus 156 ~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~---~~----------~---------~~~~~~~~~~~p~dvA~~i~~l 213 (245)
T 3e9n_A 156 LADAFRKEEANNGIRVSTVSPGPTNTPMLQGLM---DS----------Q---------GTNFRPEIYIEPKEIANAIRFV 213 (245)
T ss_dssp HHHHHHHHHGGGTCEEEEEEECCC--------------------------------------CCGGGSCHHHHHHHHHHH
T ss_pred HHHHHHHHhhhcCeEEEEEecCCccCchhhhhh---hh----------h---------hcccccccCCCHHHHHHHHHHH
Confidence 88765 35799999999999886432110 00 0 0001113467899999999999
Q ss_pred HHHhccCCCCCcEEEec
Q 010075 316 MVAHAKQPSDANIYHVG 332 (519)
Q Consensus 316 ~~~~~~~~~~~~iyni~ 332 (519)
+.... .+.+||+.
T Consensus 214 ~~~~~----~~~~~~i~ 226 (245)
T 3e9n_A 214 IDAGE----TTQITNVD 226 (245)
T ss_dssp HTSCT----TEEEEEEE
T ss_pred HcCCC----ccceeeeE
Confidence 86322 25678864
|
| >4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus} | Back alignment and structure |
|---|
Probab=99.72 E-value=1e-16 Score=158.15 Aligned_cols=202 Identities=13% Similarity=0.110 Sum_probs=132.9
Q ss_pred cCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 010075 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (519)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (519)
+.+|+++||||+|+||++++++|++.| .+|+++.|+... .+.+. ++. ..++.+
T Consensus 26 ~~~k~~lVTGas~GIG~aia~~la~~G---~~V~~~~r~~~~---~~~~~-------------~~~--------~~~~~~ 78 (272)
T 4dyv_A 26 TGKKIAIVTGAGSGVGRAVAVALAGAG---YGVALAGRRLDA---LQETA-------------AEI--------GDDALC 78 (272)
T ss_dssp --CCEEEETTTTSHHHHHHHHHHHHTT---CEEEEEESCHHH---HHHHH-------------HHH--------TSCCEE
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCC---CEEEEEECCHHH---HHHHH-------------HHh--------CCCeEE
Confidence 568999999999999999999999998 678888886321 11111 111 257889
Q ss_pred EeccCCCCCCCCChhhhHHHHh-------cCccEEEEcCccCCc--------cccHHHHHHHhHHHHHHHHHHHHhc---
Q 010075 90 VPGDISSEDLGLKDSNLKEELW-------NELDIMVNSAAITKF--------DERYDVAFGINTLGVIHLVNFAKKC--- 151 (519)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~-------~~vdiViH~Aa~v~f--------~~~~~~~~~~Nv~gt~~ll~~a~~~--- 151 (519)
+.+|++++ +..+.++ .++|++||+||.... .+.++..+++|+.|+..+.+.+...
T Consensus 79 ~~~Dv~d~-------~~v~~~~~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~ 151 (272)
T 4dyv_A 79 VPTDVTDP-------DSVRALFTATVEKFGRVDVLFNNAGTGAPAIPMEDLTFAQWKQVVDTNLTGPFLCTQEAFRVMKA 151 (272)
T ss_dssp EECCTTSH-------HHHHHHHHHHHHHHSCCCEEEECCCCCCCSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHH
T ss_pred EEecCCCH-------HHHHHHHHHHHHHcCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHh
Confidence 99999953 3333443 379999999997532 2457888999999998888876542
Q ss_pred cC--CceEEEEecceeecCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCc
Q 010075 152 VK--LKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPN 229 (519)
Q Consensus 152 ~~--l~~~V~vSTa~v~~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n 229 (519)
.+ -.++|++||...+... ....
T Consensus 152 ~~~~~g~IV~isS~~~~~~~--------------------------------------------------------~~~~ 175 (272)
T 4dyv_A 152 QEPRGGRIINNGSISATSPR--------------------------------------------------------PYSA 175 (272)
T ss_dssp SSSCCEEEEEECCSSTTSCC--------------------------------------------------------TTCH
T ss_pred CCCCCcEEEEECchhhcCCC--------------------------------------------------------CCch
Confidence 11 4689999997654211 2245
Q ss_pred HHHHHHHHHHHHHHHh-----hcCCcEEEEecCccccCCCCCCCcccccccccHHHHHHhhcCCceeeccCCCceeeeee
Q 010075 230 TYVFTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIP 304 (519)
Q Consensus 230 ~Y~~sK~~aE~lv~~~-----~~~lp~~IvRPs~V~g~~~~p~~gw~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~d~vp 304 (519)
.|+.||+..+.+.+.. ..++.+..++||.|.++....... . .... ........++.
T Consensus 176 ~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~---~--------------~~~~--~~~~~~~~~~~ 236 (272)
T 4dyv_A 176 PYTATKHAITGLTKSTSLDGRVHDIACGQIDIGNADTPMAQKMKA---G--------------VPQA--DLSIKVEPVMD 236 (272)
T ss_dssp HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEEECC-------------------------------------------C
T ss_pred HHHHHHHHHHHHHHHHHHHhCccCEEEEEEEECcccChhhhhhcc---c--------------chhh--hhcccccCCCC
Confidence 7999999999998765 357999999999998764322110 0 0000 00011234688
Q ss_pred HHHHHHHHHHHHHHhc
Q 010075 305 VDMVVNAMIVAMVAHA 320 (519)
Q Consensus 305 VDdva~aii~a~~~~~ 320 (519)
++|+|++++.++..+.
T Consensus 237 pedvA~~v~fL~s~~~ 252 (272)
T 4dyv_A 237 VAHVASAVVYMASLPL 252 (272)
T ss_dssp HHHHHHHHHHHHHSCT
T ss_pred HHHHHHHHHHHhCCCC
Confidence 9999999999997543
|
| >1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.72 E-value=1.2e-16 Score=157.94 Aligned_cols=208 Identities=15% Similarity=0.141 Sum_probs=137.8
Q ss_pred hcCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceE
Q 010075 9 FLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKIT 88 (519)
Q Consensus 9 ~~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~ 88 (519)
.+++|+|+||||||+||++++++|++.| .+|+++.|+... .+.+.+ .+++.. ...++.
T Consensus 29 ~l~~k~vlVTGasggIG~~la~~l~~~G---~~V~~~~r~~~~---~~~~~~---------~~~~~~-------~~~~~~ 86 (279)
T 1xg5_A 29 RWRDRLALVTGASGGIGAAVARALVQQG---LKVVGCARTVGN---IEELAA---------ECKSAG-------YPGTLI 86 (279)
T ss_dssp GGTTCEEEEESTTSHHHHHHHHHHHHTT---CEEEEEESCHHH---HHHHHH---------HHHHTT-------CSSEEE
T ss_pred ccCCCEEEEECCCchHHHHHHHHHHHCC---CEEEEEECChHH---HHHHHH---------HHHhcC-------CCceEE
Confidence 3789999999999999999999999998 678999986421 122211 111111 124688
Q ss_pred EEeccCCCCCCCCChhhhHHHHh-------cCccEEEEcCccCCc-------cccHHHHHHHhHHH----HHHHHHHHHh
Q 010075 89 FVPGDISSEDLGLKDSNLKEELW-------NELDIMVNSAAITKF-------DERYDVAFGINTLG----VIHLVNFAKK 150 (519)
Q Consensus 89 ~v~gDl~~~~lgls~~~~~~~l~-------~~vdiViH~Aa~v~f-------~~~~~~~~~~Nv~g----t~~ll~~a~~ 150 (519)
++.+|++++ +..+.++ .++|+|||+||.... .+.++..+++|+.| ++.+++.+++
T Consensus 87 ~~~~Dl~~~-------~~v~~~~~~~~~~~g~iD~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~l~~~~~ 159 (279)
T 1xg5_A 87 PYRCDLSNE-------EDILSMFSAIRSQHSGVDICINNAGLARPDTLLSGSTSGWKDMFNVNVLALSICTREAYQSMKE 159 (279)
T ss_dssp EEECCTTCH-------HHHHHHHHHHHHHHCCCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHH
T ss_pred EEEecCCCH-------HHHHHHHHHHHHhCCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHh
Confidence 999999953 2223333 379999999997532 24577889999999 6667777766
Q ss_pred ccCC--ceEEEEecceeecCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCC
Q 010075 151 CVKL--KVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWP 228 (519)
Q Consensus 151 ~~~l--~~~V~vSTa~v~~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~ 228 (519)
. +. .++|++||...+.... . ...
T Consensus 160 ~-~~~~g~iv~isS~~~~~~~~-------~-----------------------------------------------~~~ 184 (279)
T 1xg5_A 160 R-NVDDGHIININSMSGHRVLP-------L-----------------------------------------------SVT 184 (279)
T ss_dssp T-TCCSCEEEEECCGGGTSCCS-------C-----------------------------------------------GGG
T ss_pred c-CCCCceEEEEcChhhcccCC-------C-----------------------------------------------CCC
Confidence 4 43 7999999987653110 0 123
Q ss_pred cHHHHHHHHHHHHHHHh-------hcCCcEEEEecCccccCCCCCCCcccccccccHHHHHHhhcCCceeeccCCCceee
Q 010075 229 NTYVFTKTMGEMLMQQS-------KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMD 301 (519)
Q Consensus 229 n~Y~~sK~~aE~lv~~~-------~~~lp~~IvRPs~V~g~~~~p~~gw~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~d 301 (519)
..|+.||+..|.+++.+ ..++++.+++||.|.++.... ........+... .....
T Consensus 185 ~~Y~~sK~a~~~~~~~la~e~~~~~~~i~v~~v~Pg~v~t~~~~~------~~~~~~~~~~~~------------~~~~~ 246 (279)
T 1xg5_A 185 HFYSATKYAVTALTEGLRQELREAQTHIRATCISPGVVETQFAFK------LHDKDPEKAAAT------------YEQMK 246 (279)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTTCCCEEEEEEESCBCSSHHHH------HTTTCHHHHHHH------------HC---
T ss_pred chhHHHHHHHHHHHHHHHHHHhhcCCCeEEEEEecCcccchhhhh------hcccChhHHhhh------------ccccc
Confidence 57999999998887654 247999999999987753200 000000001000 01123
Q ss_pred eeeHHHHHHHHHHHHHH
Q 010075 302 VIPVDMVVNAMIVAMVA 318 (519)
Q Consensus 302 ~vpVDdva~aii~a~~~ 318 (519)
++.++|+|++++.++..
T Consensus 247 ~~~~~dvA~~i~~l~~~ 263 (279)
T 1xg5_A 247 CLKPEDVAEAVIYVLST 263 (279)
T ss_dssp CBCHHHHHHHHHHHHHS
T ss_pred CCCHHHHHHHHHHHhcC
Confidence 67899999999998863
|
| >3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.72 E-value=1.6e-16 Score=158.13 Aligned_cols=230 Identities=15% Similarity=0.169 Sum_probs=152.1
Q ss_pred hhhcCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCc
Q 010075 7 VEFLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEK 86 (519)
Q Consensus 7 ~~~~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~ 86 (519)
..-++||+|+||||+|+||++++++|++.|....+|++..|+... .+.+.+ .+.++.+ ..+
T Consensus 28 ~~~l~~k~~lVTGas~GIG~aia~~l~~~G~~~~~V~~~~r~~~~---~~~~~~---------~l~~~~~-------~~~ 88 (287)
T 3rku_A 28 AERLAKKTVLITGASAGIGKATALEYLEASNGDMKLILAARRLEK---LEELKK---------TIDQEFP-------NAK 88 (287)
T ss_dssp HHHHTTCEEEEESTTSHHHHHHHHHHHHHHTTCSEEEEEESCHHH---HHHHHH---------HHHHHCT-------TCE
T ss_pred hhhcCCCEEEEecCCChHHHHHHHHHHHcCCCCceEEEEECCHHH---HHHHHH---------HHHhhCC-------CCe
Confidence 345789999999999999999999999998544488998887422 222221 1222211 257
Q ss_pred eEEEeccCCCCCCCCChhhhHHHHhc-------CccEEEEcCccCC----c----cccHHHHHHHhHHHHHHHHHHHHhc
Q 010075 87 ITFVPGDISSEDLGLKDSNLKEELWN-------ELDIMVNSAAITK----F----DERYDVAFGINTLGVIHLVNFAKKC 151 (519)
Q Consensus 87 v~~v~gDl~~~~lgls~~~~~~~l~~-------~vdiViH~Aa~v~----f----~~~~~~~~~~Nv~gt~~ll~~a~~~ 151 (519)
+.++.+|++++ +..+.+++ ++|++||+||... + .+.++..+++|+.|+.++++.+...
T Consensus 89 ~~~~~~Dv~d~-------~~v~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~ 161 (287)
T 3rku_A 89 VHVAQLDITQA-------EKIKPFIENLPQEFKDIDILVNNAGKALGSDRVGQIATEDIQDVFDTNVTALINITQAVLPI 161 (287)
T ss_dssp EEEEECCTTCG-------GGHHHHHHTSCGGGCSCCEEEECCCCCCCCCCTTSCCHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred EEEEECCCCCH-------HHHHHHHHHHHHhcCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 89999999963 22334332 6999999999753 1 2567888999999999999887421
Q ss_pred ---cCCceEEEEecceeecCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCC
Q 010075 152 ---VKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWP 228 (519)
Q Consensus 152 ---~~l~~~V~vSTa~v~~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~ 228 (519)
.+..++|++||....... ...
T Consensus 162 m~~~~~g~IV~isS~~~~~~~--------------------------------------------------------~~~ 185 (287)
T 3rku_A 162 FQAKNSGDIVNLGSIAGRDAY--------------------------------------------------------PTG 185 (287)
T ss_dssp HHHHTCCEEEEECCGGGTSCC--------------------------------------------------------TTC
T ss_pred HHhcCCCeEEEECChhhcCCC--------------------------------------------------------CCC
Confidence 256799999997643211 223
Q ss_pred cHHHHHHHHHHHHHHHh-----hcCCcEEEEecCccccCCCCCCCcccccccccHHHHHHhhcCCceeeccCCCceeeee
Q 010075 229 NTYVFTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVI 303 (519)
Q Consensus 229 n~Y~~sK~~aE~lv~~~-----~~~lp~~IvRPs~V~g~~~~p~~gw~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~d~v 303 (519)
..|+.||+..+.+.+.. ..++++..++||.|.++... ................. ..+
T Consensus 186 ~~Y~asKaa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~------~~~~~~~~~~~~~~~~~------------~p~ 247 (287)
T 3rku_A 186 SIYCASKFAVGAFTDSLRKELINTKIRVILIAPGLVETEFSL------VRYRGNEEQAKNVYKDT------------TPL 247 (287)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTTSSCEEEEEEESCEESSHHH------HHTTTCHHHHHHHHTTS------------CCE
T ss_pred chHHHHHHHHHHHHHHHHHHhhhcCCEEEEEeCCcCcCcccc------ccccCcHHHHHHhhccc------------CCC
Confidence 57999999999888765 35899999999999775310 00000111111111110 123
Q ss_pred eHHHHHHHHHHHHHHhccCCCCCcEEEecCCCCC
Q 010075 304 PVDMVVNAMIVAMVAHAKQPSDANIYHVGSSLRN 337 (519)
Q Consensus 304 pVDdva~aii~a~~~~~~~~~~~~iyni~s~~~~ 337 (519)
..+|||++++.++..... .-.++++.+.++...
T Consensus 248 ~pedvA~~v~~l~s~~~~-~i~g~~i~v~~g~~~ 280 (287)
T 3rku_A 248 MADDVADLIVYATSRKQN-TVIADTLIFPTNQAS 280 (287)
T ss_dssp EHHHHHHHHHHHHTSCTT-EEEEEEEEEETTEEE
T ss_pred CHHHHHHHHHHHhCCCCC-eEecceEEeeCCCCC
Confidence 789999999998864321 112567888776443
|
| >3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.72 E-value=1.7e-16 Score=153.13 Aligned_cols=191 Identities=10% Similarity=0.101 Sum_probs=132.3
Q ss_pred cCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 010075 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (519)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (519)
|.+|+|+||||+|+||++++++|++.| .+|+++.|+... .+.+. ++. ..++.+
T Consensus 1 Ms~k~vlVTGas~GIG~a~a~~l~~~G---~~V~~~~r~~~~---~~~~~-------------~~~--------~~~~~~ 53 (235)
T 3l6e_A 1 MSLGHIIVTGAGSGLGRALTIGLVERG---HQVSMMGRRYQR---LQQQE-------------LLL--------GNAVIG 53 (235)
T ss_dssp --CCEEEEESTTSHHHHHHHHHHHHTT---CEEEEEESCHHH---HHHHH-------------HHH--------GGGEEE
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCC---CEEEEEECCHHH---HHHHH-------------HHh--------cCCceE
Confidence 357999999999999999999999998 678999886421 12221 111 135889
Q ss_pred EeccCCCCCCCCChhhhHHHHh-------cCccEEEEcCccCCc-------cccHHHHHHHhHHHHHHHHHHHHhc--cC
Q 010075 90 VPGDISSEDLGLKDSNLKEELW-------NELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKC--VK 153 (519)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~-------~~vdiViH~Aa~v~f-------~~~~~~~~~~Nv~gt~~ll~~a~~~--~~ 153 (519)
+.+|++++ +..+.++ .++|++||+||.... .+.++..+++|+.|+..+++.+... .+
T Consensus 54 ~~~D~~~~-------~~v~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~ 126 (235)
T 3l6e_A 54 IVADLAHH-------EDVDVAFAAAVEWGGLPELVLHCAGTGEFGPVGVYTAEQIRRVMESNLVSTILVAQQTVRLIGER 126 (235)
T ss_dssp EECCTTSH-------HHHHHHHHHHHHHHCSCSEEEEECCCC------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTT
T ss_pred EECCCCCH-------HHHHHHHHHHHHhcCCCcEEEECCCCCCCCChHhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc
Confidence 99999953 2223333 368999999998532 2567888999999999998887542 12
Q ss_pred CceEEEEecceeecCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcHHHH
Q 010075 154 LKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVF 233 (519)
Q Consensus 154 l~~~V~vSTa~v~~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~Y~~ 233 (519)
-.++|++||....... .....|+.
T Consensus 127 ~~~iv~isS~~~~~~~--------------------------------------------------------~~~~~Y~a 150 (235)
T 3l6e_A 127 GGVLANVLSSAAQVGK--------------------------------------------------------ANESLYCA 150 (235)
T ss_dssp CEEEEEECCEECCSSC--------------------------------------------------------SSHHHHHH
T ss_pred CCEEEEEeCHHhcCCC--------------------------------------------------------CCCcHHHH
Confidence 2389999997654321 12357999
Q ss_pred HHHHHHHHHHHh-----hcCCcEEEEecCccccCCCCCCCcccccccccHHHHHHhhcCCceeeccCCCceeeeeeHHHH
Q 010075 234 TKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMV 308 (519)
Q Consensus 234 sK~~aE~lv~~~-----~~~lp~~IvRPs~V~g~~~~p~~gw~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~d~vpVDdv 308 (519)
||+..+.+.+.. ..++.+..++||.|-.+...... . .....++..+|+
T Consensus 151 sKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~-------~--------------------~~~~~~~~pedv 203 (235)
T 3l6e_A 151 SKWGMRGFLESLRAELKDSPLRLVNLYPSGIRSEFWDNTD-------H--------------------VDPSGFMTPEDA 203 (235)
T ss_dssp HHHHHHHHHHHHHHHTTTSSEEEEEEEEEEECCCC--------------------------------------CBCHHHH
T ss_pred HHHHHHHHHHHHHHHhhccCCEEEEEeCCCccCcchhccC-------C--------------------CCCcCCCCHHHH
Confidence 999999888765 34799999999998665321100 0 001146889999
Q ss_pred HHHHHHHHH
Q 010075 309 VNAMIVAMV 317 (519)
Q Consensus 309 a~aii~a~~ 317 (519)
|++++.++.
T Consensus 204 A~~v~~l~~ 212 (235)
T 3l6e_A 204 AAYMLDALE 212 (235)
T ss_dssp HHHHHHHTC
T ss_pred HHHHHHHHh
Confidence 999998885
|
| >2qhx_A Pteridine reductase 1; oxidoreductase, short-chain dehydrogenase/reductase, trypanosomatid, pterin salvage, drug resistance; HET: NAP FE1; 2.61A {Leishmania major} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.72 E-value=3.5e-16 Score=158.59 Aligned_cols=225 Identities=15% Similarity=0.091 Sum_probs=148.6
Q ss_pred cCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEE-ecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceE
Q 010075 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFV-RAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKIT 88 (519)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~Lv-R~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~ 88 (519)
+++|+||||||+|+||+++++.|++.| .+|+++. |+.. ..+++.+ .++... ..++.
T Consensus 44 l~~k~~lVTGas~GIG~aia~~La~~G---~~Vv~~~~r~~~---~~~~~~~---------~l~~~~--------~~~~~ 100 (328)
T 2qhx_A 44 PTVPVALVTGAAKRLGRSIAEGLHAEG---YAVCLHYHRSAA---EANALSA---------TLNARR--------PNSAI 100 (328)
T ss_dssp -CCCEEEETTCSSHHHHHHHHHHHHTT---CEEEEEESSCHH---HHHHHHH---------HHHHHS--------TTCEE
T ss_pred cCCCEEEEECCCCHHHHHHHHHHHHCC---CEEEEEcCCCHH---HHHHHHH---------HHHhhc--------CCeEE
Confidence 678999999999999999999999998 6788888 7532 1222221 111111 25788
Q ss_pred EEeccCCCCCC-------C---CChhhhHHHHh-------cCccEEEEcCccCCc---------------------cccH
Q 010075 89 FVPGDISSEDL-------G---LKDSNLKEELW-------NELDIMVNSAAITKF---------------------DERY 130 (519)
Q Consensus 89 ~v~gDl~~~~l-------g---ls~~~~~~~l~-------~~vdiViH~Aa~v~f---------------------~~~~ 130 (519)
++.+|+++++- | ..+....+.++ .++|+|||+||.... .+.+
T Consensus 101 ~~~~Dl~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~e~~~~~~~~~~~~~ 180 (328)
T 2qhx_A 101 TVQADLSNVATAPVSGADGSAPVTLFTRCAELVAACYTHWGRCDVLVNNASSFYPTPLLRNDEDGHEPCVGDREAMETAT 180 (328)
T ss_dssp EEECCCSSSCBCC-------CCBCHHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCSCC-------------CHHHHHH
T ss_pred EEEeeCCCchhccccccccccccccHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCChhhcCccccccccccccccHHHH
Confidence 99999997530 0 00000122332 379999999997532 3456
Q ss_pred HHHHHHhHHHHHHHHHHHHhc---cC------CceEEEEecceeecCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhh
Q 010075 131 DVAFGINTLGVIHLVNFAKKC---VK------LKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELK 201 (519)
Q Consensus 131 ~~~~~~Nv~gt~~ll~~a~~~---~~------l~~~V~vSTa~v~~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~ 201 (519)
+..+++|+.|+..+++++... .+ ..++|++||...+...
T Consensus 181 ~~~~~vN~~g~~~l~~~~~~~m~~~~~~~~~~~g~IV~isS~~~~~~~-------------------------------- 228 (328)
T 2qhx_A 181 ADLFGSNAIAPYFLIKAFAHRVAGTPAKHRGTNYSIINMVDAMTNQPL-------------------------------- 228 (328)
T ss_dssp HHHHHHHTHHHHHHHHHHHHHHHHSCGGGSCSCEEEEEECCTTTTSCC--------------------------------
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCcCCCCCcEEEEECchhhccCC--------------------------------
Confidence 677999999999998887542 13 5799999998654211
Q ss_pred hcCCChHHHHHHHhhccccccccCCCCcHHHHHHHHHHHHHHHh-----hcCCcEEEEecCccccCCCCCCCcccccccc
Q 010075 202 TKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKT 276 (519)
Q Consensus 202 ~~~~~~~~~~~~~~~lg~~~~~~~~~~n~Y~~sK~~aE~lv~~~-----~~~lp~~IvRPs~V~g~~~~p~~gw~~~~~~ 276 (519)
.....|+.||+..+.+.+.. ..++.+.+++||.|.++. +..
T Consensus 229 ------------------------~~~~~Y~asKaal~~l~~~la~el~~~gIrvn~v~PG~v~T~~-~~~--------- 274 (328)
T 2qhx_A 229 ------------------------LGYTIYTMAKGALEGLTRSAALELAPLQIRVNGVGPGLSVLVD-DMP--------- 274 (328)
T ss_dssp ------------------------TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSCCC-CSC---------
T ss_pred ------------------------CCcHHHHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcccCCc-ccc---------
Confidence 12357999999999888765 347999999999998765 211
Q ss_pred cHHHHHHhhcCCceeeccCCCcee-eeeeHHHHHHHHHHHHHHhccCCCCCcEEEecCC
Q 010075 277 INTLFVASAQGNLRCLVGETKVIM-DVIPVDMVVNAMIVAMVAHAKQPSDANIYHVGSS 334 (519)
Q Consensus 277 ~~~~i~~~~~g~~~~~~~~~~~~~-d~vpVDdva~aii~a~~~~~~~~~~~~iyni~s~ 334 (519)
........... + .. -+...+|+|++++.++.... ..-.++++++.+|
T Consensus 275 -~~~~~~~~~~~----p-----~~~r~~~pedvA~~v~~l~s~~~-~~itG~~i~vdGG 322 (328)
T 2qhx_A 275 -PAVWEGHRSKV----P-----LYQRDSSAAEVSDVVIFLCSSKA-KYITGTCVKVDGG 322 (328)
T ss_dssp -HHHHHHHHTTC----T-----TTTSCBCHHHHHHHHHHHHSGGG-TTCCSCEEEESTT
T ss_pred -HHHHHHHHhhC----C-----CCCCCCCHHHHHHHHHHHhCccc-cCccCcEEEECCC
Confidence 11111111111 1 11 35678999999999886332 2223688999877
|
| >3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A* | Back alignment and structure |
|---|
Probab=99.71 E-value=3e-16 Score=154.11 Aligned_cols=233 Identities=12% Similarity=0.045 Sum_probs=151.4
Q ss_pred cCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 010075 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (519)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (519)
++||+++||||+|+||++++++|++.| .+|+++.|+... .+.+. +.+.++.+ ..++.+
T Consensus 6 l~~k~~lVTGas~GIG~aia~~l~~~G---~~V~~~~r~~~~---~~~~~---------~~l~~~~~-------~~~~~~ 63 (265)
T 3lf2_A 6 LSEAVAVVTGGSSGIGLATVELLLEAG---AAVAFCARDGER---LRAAE---------SALRQRFP-------GARLFA 63 (265)
T ss_dssp CTTCEEEEETCSSHHHHHHHHHHHHTT---CEEEEEESCHHH---HHHHH---------HHHHHHST-------TCCEEE
T ss_pred cCCCEEEEeCCCChHHHHHHHHHHHCC---CEEEEEeCCHHH---HHHHH---------HHHHHhcC-------CceEEE
Confidence 578999999999999999999999998 678898886422 12221 11222121 245899
Q ss_pred EeccCCCCCCCCChhhhHHHHh-------cCccEEEEcCccCCc-------cccHHHHHHHhHHHHHHHHHHHHhc---c
Q 010075 90 VPGDISSEDLGLKDSNLKEELW-------NELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKC---V 152 (519)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~-------~~vdiViH~Aa~v~f-------~~~~~~~~~~Nv~gt~~ll~~a~~~---~ 152 (519)
+.+|++++ +..+.++ .++|++||+||.... .+.++..+++|+.|+.++++.+... .
T Consensus 64 ~~~Dv~~~-------~~v~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~ 136 (265)
T 3lf2_A 64 SVCDVLDA-------LQVRAFAEACERTLGCASILVNNAGQGRVSTFAETTDEAWSEELQLKFFSVIHPVRAFLPQLESR 136 (265)
T ss_dssp EECCTTCH-------HHHHHHHHHHHHHHCSCSEEEECCCCCCCBCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTS
T ss_pred EeCCCCCH-------HHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHhhcc
Confidence 99999963 2222332 479999999997543 2567888999999999999988542 2
Q ss_pred CCceEEEEecceeecCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcHHH
Q 010075 153 KLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYV 232 (519)
Q Consensus 153 ~l~~~V~vSTa~v~~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~Y~ 232 (519)
+-.++|++||....... .....|+
T Consensus 137 ~~g~iv~isS~~~~~~~--------------------------------------------------------~~~~~Y~ 160 (265)
T 3lf2_A 137 ADAAIVCVNSLLASQPE--------------------------------------------------------PHMVATS 160 (265)
T ss_dssp TTEEEEEEEEGGGTSCC--------------------------------------------------------TTBHHHH
T ss_pred CCeEEEEECCcccCCCC--------------------------------------------------------CCchhhH
Confidence 45689999997654211 2245799
Q ss_pred HHHHHHHHHHHHh-----hcCCcEEEEecCccccCCCCCCCcc-cccccccHHHHHHhhcCCceeeccCCCceeeeeeHH
Q 010075 233 FTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGW-VEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVD 306 (519)
Q Consensus 233 ~sK~~aE~lv~~~-----~~~lp~~IvRPs~V~g~~~~p~~gw-~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~d~vpVD 306 (519)
.||+..+.+.+.. ..++++..++||.|.++........ ................. .......+...+
T Consensus 161 asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~p~~r~~~pe 233 (265)
T 3lf2_A 161 AARAGVKNLVRSMAFEFAPKGVRVNGILIGLVESGQWRRRFEAREERELDWAQWTAQLARN-------KQIPLGRLGKPI 233 (265)
T ss_dssp HHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHHTC------CHHHHHHHHHHH-------TTCTTCSCBCHH
T ss_pred HHHHHHHHHHHHHHHHhcccCeEEEEEEeCcCcCchhhhhhhhhhhhccCHHHHHHHHhhc-------cCCCcCCCcCHH
Confidence 9999999888754 3479999999999977532110000 00000001111111100 001123467899
Q ss_pred HHHHHHHHHHHHhccCCCCCcEEEecCCC
Q 010075 307 MVVNAMIVAMVAHAKQPSDANIYHVGSSL 335 (519)
Q Consensus 307 dva~aii~a~~~~~~~~~~~~iyni~s~~ 335 (519)
|+|++++.++..... --.++++++.+|.
T Consensus 234 dvA~~v~fL~s~~~~-~itG~~i~vdGG~ 261 (265)
T 3lf2_A 234 EAARAILFLASPLSA-YTTGSHIDVSGGL 261 (265)
T ss_dssp HHHHHHHHHHSGGGT-TCCSEEEEESSSC
T ss_pred HHHHHHHHHhCchhc-CcCCCEEEECCCC
Confidence 999999998864332 2247899998874
|
| >4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum} | Back alignment and structure |
|---|
Probab=99.71 E-value=1.6e-16 Score=157.00 Aligned_cols=223 Identities=14% Similarity=0.113 Sum_probs=149.4
Q ss_pred cCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 010075 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (519)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (519)
++||+++||||+|+||+++++.|++.| .+|+++.|+...... +.+++ ++ ...++.+
T Consensus 31 l~gk~~lVTGas~GIG~aia~~la~~G---~~V~~~~r~~~~~~~---~~~~~---------~~---------~~~~~~~ 86 (275)
T 4imr_A 31 LRGRTALVTGSSRGIGAAIAEGLAGAG---AHVILHGVKPGSTAA---VQQRI---------IA---------SGGTAQE 86 (275)
T ss_dssp CTTCEEEETTCSSHHHHHHHHHHHHTT---CEEEEEESSTTTTHH---HHHHH---------HH---------TTCCEEE
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCC---CEEEEEcCCHHHHHH---HHHHH---------Hh---------cCCeEEE
Confidence 689999999999999999999999998 688999997654322 11111 11 1357899
Q ss_pred EeccCCCCCCCCChhhhHHHHh------cCccEEEEcCccCCc-------cccHHHHHHHhHHHHHHHHHHHHhc---cC
Q 010075 90 VPGDISSEDLGLKDSNLKEELW------NELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKC---VK 153 (519)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~------~~vdiViH~Aa~v~f-------~~~~~~~~~~Nv~gt~~ll~~a~~~---~~ 153 (519)
+.+|+++++ ..+.+. .++|++||+||.... .+.++..+++|+.|+.++++.+... .+
T Consensus 87 ~~~Dv~~~~-------~~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~ 159 (275)
T 4imr_A 87 LAGDLSEAG-------AGTDLIERAEAIAPVDILVINASAQINATLSALTPNDLAFQLAVNLGSTVDMLQSALPKMVARK 159 (275)
T ss_dssp EECCTTSTT-------HHHHHHHHHHHHSCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT
T ss_pred EEecCCCHH-------HHHHHHHHHHHhCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC
Confidence 999999643 222332 479999999997532 2567888999999999999887431 25
Q ss_pred CceEEEEecceeecCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcHHHH
Q 010075 154 LKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVF 233 (519)
Q Consensus 154 l~~~V~vSTa~v~~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~Y~~ 233 (519)
..++|++||...+... .....|+.
T Consensus 160 ~g~Iv~isS~~~~~~~--------------------------------------------------------~~~~~Y~a 183 (275)
T 4imr_A 160 WGRVVSIGSINQLRPK--------------------------------------------------------SVVTAYAA 183 (275)
T ss_dssp CEEEEEECCGGGTSCC--------------------------------------------------------TTBHHHHH
T ss_pred CcEEEEECCHHhCCCC--------------------------------------------------------CCchhhHH
Confidence 5799999997654310 22456999
Q ss_pred HHHHHHHHHHHh-----hcCCcEEEEecCccccCCCCCCCcccccccccHHHHHHhhcCCceeeccCCCceeeeeeHHHH
Q 010075 234 TKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMV 308 (519)
Q Consensus 234 sK~~aE~lv~~~-----~~~lp~~IvRPs~V~g~~~~p~~gw~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~d~vpVDdv 308 (519)
||+..+.+.+.. ..++.+..++||.|.++..... . .............. .....+...+|+
T Consensus 184 sKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~---~---~~~~~~~~~~~~~~--------~p~~r~~~pedv 249 (275)
T 4imr_A 184 TKAAQHNLIQSQARDFAGDNVLLNTLAPGLVDTDRNADR---R---AQDPEGWDEYVRTL--------NWMGRAGRPEEM 249 (275)
T ss_dssp HHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCSHHHHHH---H---HHCHHHHHHHHHHH--------STTCSCBCGGGG
T ss_pred HHHHHHHHHHHHHHHhcccCcEEEEEEeccccCcccccc---c---ccChHHHHHHHhhc--------CccCCCcCHHHH
Confidence 999999888755 3479999999999876532100 0 00001111111100 001124668899
Q ss_pred HHHHHHHHHHhccCCCCCcEEEecCC
Q 010075 309 VNAMIVAMVAHAKQPSDANIYHVGSS 334 (519)
Q Consensus 309 a~aii~a~~~~~~~~~~~~iyni~s~ 334 (519)
|++++.++..... --.++++++.+|
T Consensus 250 A~~v~fL~s~~a~-~itG~~i~vdGG 274 (275)
T 4imr_A 250 VGAALFLASEACS-FMTGETIFLTGG 274 (275)
T ss_dssp HHHHHHHHSGGGT-TCCSCEEEESSC
T ss_pred HHHHHHHcCcccC-CCCCCEEEeCCC
Confidence 9999998864332 224788988776
|
| >3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium} | Back alignment and structure |
|---|
Probab=99.71 E-value=1.6e-16 Score=157.17 Aligned_cols=218 Identities=11% Similarity=0.064 Sum_probs=148.4
Q ss_pred hcCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceE
Q 010075 9 FLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKIT 88 (519)
Q Consensus 9 ~~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~ 88 (519)
-++||+|+||||+|+||++++++|++.| .+|+++.|+... .+.+. ++. ..++.
T Consensus 27 ~l~~k~vlVTGas~GIG~aia~~l~~~G---~~Vi~~~r~~~~---~~~~~-------------~~~--------~~~~~ 79 (281)
T 3ppi_A 27 QFEGASAIVSGGAGGLGEATVRRLHADG---LGVVIADLAAEK---GKALA-------------DEL--------GNRAE 79 (281)
T ss_dssp GGTTEEEEEETTTSHHHHHHHHHHHHTT---CEEEEEESCHHH---HHHHH-------------HHH--------CTTEE
T ss_pred ccCCCEEEEECCCChHHHHHHHHHHHCC---CEEEEEeCChHH---HHHHH-------------HHh--------CCceE
Confidence 3689999999999999999999999998 678888886321 12221 111 25789
Q ss_pred EEeccCCCCCCCCChhhhHHHHhc------CccEEEEcCccCC-c------------cccHHHHHHHhHHHHHHHHHHHH
Q 010075 89 FVPGDISSEDLGLKDSNLKEELWN------ELDIMVNSAAITK-F------------DERYDVAFGINTLGVIHLVNFAK 149 (519)
Q Consensus 89 ~v~gDl~~~~lgls~~~~~~~l~~------~vdiViH~Aa~v~-f------------~~~~~~~~~~Nv~gt~~ll~~a~ 149 (519)
++.+|++++ +..+.+++ ++|++||+||... . .+.++..+++|+.|+.++++.+.
T Consensus 80 ~~~~Dl~~~-------~~v~~~~~~~~~~~~id~lv~~aag~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~ 152 (281)
T 3ppi_A 80 FVSTNVTSE-------DSVLAAIEAANQLGRLRYAVVAHGGFGVAQRIVQRDGSPADMGGFTKTIDLYLNGTYNVARLVA 152 (281)
T ss_dssp EEECCTTCH-------HHHHHHHHHHTTSSEEEEEEECCCCCCCCCCSBCTTSCBCCHHHHHHHHHHHTHHHHHHHHHHH
T ss_pred EEEcCCCCH-------HHHHHHHHHHHHhCCCCeEEEccCcccccccccccccccCCHHHHHHHHHHHhHHHHHHHHHHH
Confidence 999999953 32333332 6899999955321 1 13478889999999999998875
Q ss_pred hc---------cCCceEEEEecceeecCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhcccc
Q 010075 150 KC---------VKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTE 220 (519)
Q Consensus 150 ~~---------~~l~~~V~vSTa~v~~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~ 220 (519)
.. ++-.++|++||...+...
T Consensus 153 ~~~~~~~~~~~~~~g~iv~isS~~~~~~~--------------------------------------------------- 181 (281)
T 3ppi_A 153 ASIAAAEPRENGERGALVLTASIAGYEGQ--------------------------------------------------- 181 (281)
T ss_dssp HHHHTSCCCTTSCCEEEEEECCGGGTSCC---------------------------------------------------
T ss_pred HHHHhhcccccCCCeEEEEEecccccCCC---------------------------------------------------
Confidence 32 134589999998654321
Q ss_pred ccccCCCCcHHHHHHHHHHHHHHHh-----hcCCcEEEEecCccccCCCCCCCcccccccccHHHHHHhhcCCceeeccC
Q 010075 221 RAKLHGWPNTYVFTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGE 295 (519)
Q Consensus 221 ~~~~~~~~n~Y~~sK~~aE~lv~~~-----~~~lp~~IvRPs~V~g~~~~p~~gw~~~~~~~~~~i~~~~~g~~~~~~~~ 295 (519)
.....|+.||+..+.+.+.. ..++.+..++||.|.++..... ..........+..
T Consensus 182 -----~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~---------~~~~~~~~~~~~~------ 241 (281)
T 3ppi_A 182 -----IGQTAYAAAKAGVIGLTIAAARDLSSAGIRVNTIAPGTMKTPIMESV---------GEEALAKFAANIP------ 241 (281)
T ss_dssp -----TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTT---------CHHHHHHHHHTCC------
T ss_pred -----CCCcccHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCcCCchhhhcc---------cHHHHHHHHhcCC------
Confidence 22457999999888877654 3479999999999876533211 1111222211110
Q ss_pred CCceeeeeeHHHHHHHHHHHHHHhccCCCCCcEEEecCCCC
Q 010075 296 TKVIMDVIPVDMVVNAMIVAMVAHAKQPSDANIYHVGSSLR 336 (519)
Q Consensus 296 ~~~~~d~vpVDdva~aii~a~~~~~~~~~~~~iyni~s~~~ 336 (519)
....++.++|+|++++.++... .-.++++++.+|..
T Consensus 242 --~~~~~~~pedvA~~v~~l~s~~---~~tG~~i~vdGG~~ 277 (281)
T 3ppi_A 242 --FPKRLGTPDEFADAAAFLLTNG---YINGEVMRLDGAQR 277 (281)
T ss_dssp --SSSSCBCHHHHHHHHHHHHHCS---SCCSCEEEESTTCC
T ss_pred --CCCCCCCHHHHHHHHHHHHcCC---CcCCcEEEECCCcc
Confidence 0134688999999999998632 22478999988854
|
| >3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile} | Back alignment and structure |
|---|
Probab=99.70 E-value=5.1e-16 Score=154.18 Aligned_cols=215 Identities=15% Similarity=0.163 Sum_probs=144.0
Q ss_pred cCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCccc----HHHHHHHHHhhhhhHHHHHhhhccccccccCC
Q 010075 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDS----AALRFQNEVLAKDVFNVLKEKWGTRLNSFISE 85 (519)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~----~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~ 85 (519)
++||+++||||+|+||++++++|++.| .+|+++.|+..... ..++..++ +++. ..
T Consensus 7 l~~k~vlVTGas~GIG~aia~~l~~~G---~~V~~~~r~~~~~~~~~~~~~~~~~~---------~~~~---------~~ 65 (285)
T 3sc4_A 7 LRGKTMFISGGSRGIGLAIAKRVAADG---ANVALVAKSAEPHPKLPGTIYTAAKE---------IEEA---------GG 65 (285)
T ss_dssp CTTCEEEEESCSSHHHHHHHHHHHTTT---CEEEEEESCCSCCSSSCCCHHHHHHH---------HHHH---------TS
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCC---CEEEEEECChhhhhhhhHHHHHHHHH---------HHhc---------CC
Confidence 678999999999999999999999998 68899999865321 11121111 1111 25
Q ss_pred ceEEEeccCCCCCCCCChhhhHHHHh-------cCccEEEEcCccCCc-------cccHHHHHHHhHHHHHHHHHHHHhc
Q 010075 86 KITFVPGDISSEDLGLKDSNLKEELW-------NELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKC 151 (519)
Q Consensus 86 ~v~~v~gDl~~~~lgls~~~~~~~l~-------~~vdiViH~Aa~v~f-------~~~~~~~~~~Nv~gt~~ll~~a~~~ 151 (519)
++.++.+|++++ +..+.++ .++|++||+||.... .+.++..+++|+.|+..+++.+...
T Consensus 66 ~~~~~~~Dv~~~-------~~v~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~ 138 (285)
T 3sc4_A 66 QALPIVGDIRDG-------DAVAAAVAKTVEQFGGIDICVNNASAINLGSIEEVPLKRFDLMNGIQVRGTYAVSQSCIPH 138 (285)
T ss_dssp EEEEEECCTTSH-------HHHHHHHHHHHHHHSCCSEEEECCCCCCCCCTTTSCHHHHHHHHHHHHHHHHHHHHHHGGG
T ss_pred cEEEEECCCCCH-------HHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence 789999999953 3233333 379999999997642 2567788999999999999988653
Q ss_pred ---cCCceEEEEecceeecCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCC
Q 010075 152 ---VKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWP 228 (519)
Q Consensus 152 ---~~l~~~V~vSTa~v~~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~ 228 (519)
.+..++|++||........ ...
T Consensus 139 m~~~~~g~iv~isS~~~~~~~~-------------------------------------------------------~~~ 163 (285)
T 3sc4_A 139 MKGRDNPHILTLSPPIRLEPKW-------------------------------------------------------LRP 163 (285)
T ss_dssp TTTSSSCEEEECCCCCCCSGGG-------------------------------------------------------SCS
T ss_pred HHHcCCcEEEEECChhhccCCC-------------------------------------------------------CCC
Confidence 2446899999975432110 123
Q ss_pred cHHHHHHHHHHHHHHHh-----hcCCcEEEEecCccccCCCCCCCcccccccccHHHHHHhhcCCceeeccCCCceeeee
Q 010075 229 NTYVFTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVI 303 (519)
Q Consensus 229 n~Y~~sK~~aE~lv~~~-----~~~lp~~IvRPs~V~g~~~~p~~gw~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~d~v 303 (519)
..|+.||+..+.+.+.. ..++.+..+.||.+..+. +....... ......+.
T Consensus 164 ~~Y~asKaal~~~~~~la~e~~~~gI~vn~v~PG~~v~t~----------------~~~~~~~~--------~~~~~r~~ 219 (285)
T 3sc4_A 164 TPYMMAKYGMTLCALGIAEELRDAGIASNTLWPRTTVATA----------------AVQNLLGG--------DEAMARSR 219 (285)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTGGGTCEEEEEECSSCBCCH----------------HHHHHHTS--------CCCCTTCB
T ss_pred chHHHHHHHHHHHHHHHHHHhcccCcEEEEEeCCCccccH----------------HHHhhccc--------cccccCCC
Confidence 67999999999888755 357999999998432211 11111111 11122356
Q ss_pred eHHHHHHHHHHHHHHhccCCCCCcEEEecC
Q 010075 304 PVDMVVNAMIVAMVAHAKQPSDANIYHVGS 333 (519)
Q Consensus 304 pVDdva~aii~a~~~~~~~~~~~~iyni~s 333 (519)
..+|+|++++.++.... .-.++++.+.+
T Consensus 220 ~pedvA~~~~~l~s~~~--~~tG~~i~~dg 247 (285)
T 3sc4_A 220 KPEVYADAAYVVLNKPS--SYTGNTLLCED 247 (285)
T ss_dssp CTHHHHHHHHHHHTSCT--TCCSCEEEHHH
T ss_pred CHHHHHHHHHHHhCCcc--cccceEEEEcC
Confidence 78999999999886432 22345555433
|
| >2x9g_A PTR1, pteridine reductase; short chain dehydrogenase, oxidoreductase; HET: NAP LYA; 1.10A {Trypanosoma brucei brucei} PDB: 2x9n_A* 2x9v_A* 3bmc_A* 3bmd_A* 3bme_A* 3bmf_A* 3bmg_A* 3bmh_A* 3bmi_A* 3bmj_A* 3bmk_A* 3bml_A* 3bmm_A* 3bmn_A* 3bmo_A* 3bmq_A* 3bmr_A* 3gn1_A* 3gn2_A* 3jq6_A* ... | Back alignment and structure |
|---|
Probab=99.70 E-value=3.8e-16 Score=155.22 Aligned_cols=224 Identities=16% Similarity=0.138 Sum_probs=146.7
Q ss_pred hcCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceE
Q 010075 9 FLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKIT 88 (519)
Q Consensus 9 ~~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~ 88 (519)
-++||+++||||+|+||+++++.|++.| .+|+++.|+.. ...+.+.++ ++++. ..++.
T Consensus 20 ~l~~k~~lVTGas~gIG~aia~~L~~~G---~~V~~~~r~~~--~~~~~~~~~---------l~~~~--------~~~~~ 77 (288)
T 2x9g_A 20 HMEAPAAVVTGAAKRIGRAIAVKLHQTG---YRVVIHYHNSA--EAAVSLADE---------LNKER--------SNTAV 77 (288)
T ss_dssp --CCCEEEETTCSSHHHHHHHHHHHHHT---CEEEEEESSCH--HHHHHHHHH---------HHHHS--------TTCEE
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHCC---CeEEEEeCCch--HHHHHHHHH---------HHhhc--------CCceE
Confidence 3689999999999999999999999999 67899998751 111222211 11111 25788
Q ss_pred EEeccCCCCCCCCChhhhHHHHh-------cCccEEEEcCccCC---c--------------cccHHHHHHHhHHHHHHH
Q 010075 89 FVPGDISSEDLGLKDSNLKEELW-------NELDIMVNSAAITK---F--------------DERYDVAFGINTLGVIHL 144 (519)
Q Consensus 89 ~v~gDl~~~~lgls~~~~~~~l~-------~~vdiViH~Aa~v~---f--------------~~~~~~~~~~Nv~gt~~l 144 (519)
++.+|++++.. ..+..+.++ .++|+|||+||... + .+.++..+++|+.|+..+
T Consensus 78 ~~~~Dv~~~~~---~~~~v~~~~~~~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l 154 (288)
T 2x9g_A 78 VCQADLTNSNV---LPASCEEIINSCFRAFGRCDVLVNNASAFYPTPLVQGDHEDNSNGKTVETQVAELIGTNAIAPFLL 154 (288)
T ss_dssp EEECCCSCSTT---HHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCSCCC--------CCHHHHHHHHHHHHTHHHHHH
T ss_pred EEEeecCCccC---CHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCccccccchhcccccCCHHHHHHHHHHhhHHHHHH
Confidence 99999996210 023222332 37999999999753 1 134567799999999999
Q ss_pred HHHHHhc-c--C------CceEEEEecceeecCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHh
Q 010075 145 VNFAKKC-V--K------LKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMK 215 (519)
Q Consensus 145 l~~a~~~-~--~------l~~~V~vSTa~v~~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 215 (519)
++.+... . + ..++|++||...+...
T Consensus 155 ~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~---------------------------------------------- 188 (288)
T 2x9g_A 155 TMSFAQRQKGTNPNCTSSNLSIVNLCDAMVDQPC---------------------------------------------- 188 (288)
T ss_dssp HHHHHHHC--------CCCEEEEEECCTTTTSCC----------------------------------------------
T ss_pred HHHHHHHHhhcCCCCCCCCeEEEEEecccccCCC----------------------------------------------
Confidence 9887643 1 2 4689999997654311
Q ss_pred hccccccccCCCCcHHHHHHHHHHHHHHHh-----hcCCcEEEEecCccccCCCCCCCcccccccccHHHHHHhhcCCce
Q 010075 216 NLGTERAKLHGWPNTYVFTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLR 290 (519)
Q Consensus 216 ~lg~~~~~~~~~~n~Y~~sK~~aE~lv~~~-----~~~lp~~IvRPs~V~g~~~~p~~gw~~~~~~~~~~i~~~~~g~~~ 290 (519)
.....|+.||+..+.+.+.. ..++++.+++||.|.++. . . .. ..........
T Consensus 189 ----------~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~-~-~---~~------~~~~~~~~~~-- 245 (288)
T 2x9g_A 189 ----------MAFSLYNMGKHALVGLTQSAALELAPYGIRVNGVAPGVSLLPV-A-M---GE------EEKDKWRRKV-- 245 (288)
T ss_dssp ----------TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSCSCCT-T-S---CH------HHHHHHHHTC--
T ss_pred ----------CCCchHHHHHHHHHHHHHHHHHHhhccCeEEEEEEeccccCcc-c-c---Ch------HHHHHHHhhC--
Confidence 22357999999888877654 347999999999998875 2 1 00 1111111111
Q ss_pred eeccCCCceeee-eeHHHHHHHHHHHHHHhccCCCCCcEEEecCC
Q 010075 291 CLVGETKVIMDV-IPVDMVVNAMIVAMVAHAKQPSDANIYHVGSS 334 (519)
Q Consensus 291 ~~~~~~~~~~d~-vpVDdva~aii~a~~~~~~~~~~~~iyni~s~ 334 (519)
+ ...+ ...+|+|++++.++.... ..-.++++++.+|
T Consensus 246 --p-----~~r~~~~pedvA~~v~~l~s~~~-~~itG~~i~vdGG 282 (288)
T 2x9g_A 246 --P-----LGRREASAEQIADAVIFLVSGSA-QYITGSIIKVDGG 282 (288)
T ss_dssp --T-----TTSSCCCHHHHHHHHHHHHSGGG-TTCCSCEEEESTT
T ss_pred --C-----CCCCCCCHHHHHHHHHHHhCccc-cCccCCEEEECcc
Confidence 1 0123 678999999999886432 2224678888877
|
| >2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A* | Back alignment and structure |
|---|
Probab=99.70 E-value=6.6e-16 Score=150.04 Aligned_cols=205 Identities=16% Similarity=0.174 Sum_probs=139.1
Q ss_pred hcCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceE
Q 010075 9 FLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKIT 88 (519)
Q Consensus 9 ~~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~ 88 (519)
.++||+++||||||+||+++++.|++.| .+|+++.|+... .+.+.++ +++. ..++.
T Consensus 4 ~l~~k~~lVTGas~gIG~aia~~l~~~G---~~V~~~~r~~~~---~~~~~~~---------l~~~---------~~~~~ 59 (247)
T 2jah_A 4 ALQGKVALITGASSGIGEATARALAAEG---AAVAIAARRVEK---LRALGDE---------LTAA---------GAKVH 59 (247)
T ss_dssp TTTTCEEEEESCSSHHHHHHHHHHHHTT---CEEEEEESCHHH---HHHHHHH---------HHHT---------TCCEE
T ss_pred cCCCCEEEEECCCCHHHHHHHHHHHHCC---CEEEEEECCHHH---HHHHHHH---------HHhc---------CCcEE
Confidence 4679999999999999999999999998 678898886421 1222211 1110 24688
Q ss_pred EEeccCCCCCCCCChhhhHHHHh-------cCccEEEEcCccCCc-------cccHHHHHHHhHHHHHHHHHHHHhc---
Q 010075 89 FVPGDISSEDLGLKDSNLKEELW-------NELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKC--- 151 (519)
Q Consensus 89 ~v~gDl~~~~lgls~~~~~~~l~-------~~vdiViH~Aa~v~f-------~~~~~~~~~~Nv~gt~~ll~~a~~~--- 151 (519)
++.+|++++ +..+.++ .++|++||+||.... .+.++..+++|+.|+.++++.+...
T Consensus 60 ~~~~Dv~~~-------~~~~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~ 132 (247)
T 2jah_A 60 VLELDVADR-------QGVDAAVASTVEALGGLDILVNNAGIMLLGPVEDADTTDWTRMIDTNLLGLMYMTRAALPHLLR 132 (247)
T ss_dssp EEECCTTCH-------HHHHHHHHHHHHHHSCCSEEEECCCCCCCCCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHH
T ss_pred EEECCCCCH-------HHHHHHHHHHHHHcCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHH
Confidence 999999963 2223333 379999999997532 2457788999999999999887542
Q ss_pred cCCceEEEEecceeecCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcHH
Q 010075 152 VKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTY 231 (519)
Q Consensus 152 ~~l~~~V~vSTa~v~~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~Y 231 (519)
.+ .++|++||...+... .....|
T Consensus 133 ~~-g~iv~isS~~~~~~~--------------------------------------------------------~~~~~Y 155 (247)
T 2jah_A 133 SK-GTVVQMSSIAGRVNV--------------------------------------------------------RNAAVY 155 (247)
T ss_dssp HT-CEEEEECCGGGTCCC--------------------------------------------------------TTCHHH
T ss_pred CC-CEEEEEccHHhcCCC--------------------------------------------------------CCCcHH
Confidence 24 799999997654211 123579
Q ss_pred HHHHHHHHHHHHHh-----hcCCcEEEEecCccccCCCCCCCcccccccccHHHHHHhhcCCceeeccCCCceeeeeeHH
Q 010075 232 VFTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVD 306 (519)
Q Consensus 232 ~~sK~~aE~lv~~~-----~~~lp~~IvRPs~V~g~~~~p~~gw~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~d~vpVD 306 (519)
+.||+..+.+.+.. ..++++.+++||.|.++...... . .. ...... ..++ ...++..+
T Consensus 156 ~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~---~-----~~-~~~~~~----~~~~----~~~~~~pe 218 (247)
T 2jah_A 156 QATKFGVNAFSETLRQEVTERGVRVVVIEPGTTDTELRGHIT---H-----TA-TKEMYE----QRIS----QIRKLQAQ 218 (247)
T ss_dssp HHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBSSSGGGGCC---C-----HH-HHHHHH----HHTT----TSCCBCHH
T ss_pred HHHHHHHHHHHHHHHHHhcccCcEEEEEECCCCCCcchhccc---c-----hh-hHHHHH----hccc----ccCCCCHH
Confidence 99999888887654 45899999999999776432110 0 00 000000 0010 11147899
Q ss_pred HHHHHHHHHHHH
Q 010075 307 MVVNAMIVAMVA 318 (519)
Q Consensus 307 dva~aii~a~~~ 318 (519)
|+|++++.++..
T Consensus 219 dvA~~v~~l~s~ 230 (247)
T 2jah_A 219 DIAEAVRYAVTA 230 (247)
T ss_dssp HHHHHHHHHHHS
T ss_pred HHHHHHHHHhCC
Confidence 999999998863
|
| >3zv4_A CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; oxidoreductase, short chain dehydrogenase/oxidoreductase, SD comamonas testosteroni; 1.80A {Pandoraea pnomenusa} SCOP: c.2.1.2 PDB: 2y99_A* 3zv3_A 2y93_A 3zv5_A* 3zv6_A* 1bdb_A* | Back alignment and structure |
|---|
Probab=99.70 E-value=2.6e-16 Score=156.01 Aligned_cols=227 Identities=14% Similarity=0.155 Sum_probs=147.1
Q ss_pred cCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 010075 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (519)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (519)
++||+++||||+|+||++++++|++.| .+|+++.|+... .+.+. ++. ..++.+
T Consensus 3 l~gk~~lVTGas~GIG~aia~~la~~G---~~V~~~~r~~~~---~~~~~-------------~~~--------~~~~~~ 55 (281)
T 3zv4_A 3 LTGEVALITGGASGLGRALVDRFVAEG---ARVAVLDKSAER---LRELE-------------VAH--------GGNAVG 55 (281)
T ss_dssp TTTCEEEEETCSSHHHHHHHHHHHHTT---CEEEEEESCHHH---HHHHH-------------HHT--------BTTEEE
T ss_pred cCCCEEEEECCCcHHHHHHHHHHHHCc---CEEEEEeCCHHH---HHHHH-------------HHc--------CCcEEE
Confidence 568999999999999999999999998 688888886321 11111 111 257899
Q ss_pred EeccCCCCCCCCChhhhHHHH-------hcCccEEEEcCccCCcc------------ccHHHHHHHhHHHHHHHHHHHHh
Q 010075 90 VPGDISSEDLGLKDSNLKEEL-------WNELDIMVNSAAITKFD------------ERYDVAFGINTLGVIHLVNFAKK 150 (519)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l-------~~~vdiViH~Aa~v~f~------------~~~~~~~~~Nv~gt~~ll~~a~~ 150 (519)
+.+|++++ +..+.+ ..++|++||+||..... +.++..+++|+.|+..+++.+..
T Consensus 56 ~~~Dv~~~-------~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~ 128 (281)
T 3zv4_A 56 VVGDVRSL-------QDQKRAAERCLAAFGKIDTLIPNAGIWDYSTALADLPEDKIDAAFDDIFHVNVKGYIHAVKACLP 128 (281)
T ss_dssp EECCTTCH-------HHHHHHHHHHHHHHSCCCEEECCCCCCCTTCCGGGSCTTTHHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred EEcCCCCH-------HHHHHHHHHHHHhcCCCCEEEECCCcCccccccccCChhhhHHHHHHHHhhhhHHHHHHHHHHHH
Confidence 99999963 222233 24789999999975321 23777899999999999988754
Q ss_pred c--cCCceEEEEecceeecCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCC
Q 010075 151 C--VKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWP 228 (519)
Q Consensus 151 ~--~~l~~~V~vSTa~v~~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~ 228 (519)
. ++-.++|++||...+... ...
T Consensus 129 ~~~~~~g~iv~isS~~~~~~~--------------------------------------------------------~~~ 152 (281)
T 3zv4_A 129 ALVSSRGSVVFTISNAGFYPN--------------------------------------------------------GGG 152 (281)
T ss_dssp HHHHHTCEEEEECCGGGTSSS--------------------------------------------------------SSC
T ss_pred HHHhcCCeEEEEecchhccCC--------------------------------------------------------CCC
Confidence 2 122589999997543211 123
Q ss_pred cHHHHHHHHHHHHHHHh----hcCCcEEEEecCccccCCCCCCCccc-ccccccHHHHHHhhcCCceeeccCCCceeeee
Q 010075 229 NTYVFTKTMGEMLMQQS----KENLSLVIIRPTVVSGTYKEPFPGWV-EDLKTINTLFVASAQGNLRCLVGETKVIMDVI 303 (519)
Q Consensus 229 n~Y~~sK~~aE~lv~~~----~~~lp~~IvRPs~V~g~~~~p~~gw~-~~~~~~~~~i~~~~~g~~~~~~~~~~~~~d~v 303 (519)
..|+.||+..+.+.+.. .+++.+..+.||.|..+...+..... ............... ......+.
T Consensus 153 ~~Y~asKaa~~~l~~~la~e~~~~Irvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~p~~r~~ 223 (281)
T 3zv4_A 153 PLYTATKHAVVGLVRQMAFELAPHVRVNGVAPGGMNTDLRGPSSLGLSEQSISSVPLADMLKS---------VLPIGRMP 223 (281)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTTSEEEEEEECSSCC--CCCTTCC--------CCHHHHHHH---------TCTTSSCC
T ss_pred chhHHHHHHHHHHHHHHHHHhcCCCEEEEEECCcCcCCcccccccccccccccchhHHHHHHh---------cCCCCCCC
Confidence 56999999999888765 34599999999999876542211000 000000001111111 11123467
Q ss_pred eHHHHHHHHHHHHHHhccCCCCCcEEEecCCC
Q 010075 304 PVDMVVNAMIVAMVAHAKQPSDANIYHVGSSL 335 (519)
Q Consensus 304 pVDdva~aii~a~~~~~~~~~~~~iyni~s~~ 335 (519)
..+|+|++++.++.......-.++++++.+|.
T Consensus 224 ~pedvA~~v~fL~s~~~~~~itG~~i~vdGG~ 255 (281)
T 3zv4_A 224 ALEEYTGAYVFFATRGDSLPATGALLNYDGGM 255 (281)
T ss_dssp CGGGGSHHHHHHHSTTTSTTCSSCEEEESSSG
T ss_pred CHHHHHHHHHHhhcccccccccCcEEEECCCC
Confidence 78999999999886222222247899998873
|
| >3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.70 E-value=8.8e-16 Score=150.81 Aligned_cols=204 Identities=13% Similarity=0.163 Sum_probs=134.5
Q ss_pred cCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 010075 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (519)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (519)
+.+|+++||||+|+||+++++.|++.| .+|+++.|+... .+.+.++ +++. ..++.+
T Consensus 2 l~~k~~lVTGas~GIG~aia~~la~~G---~~V~~~~r~~~~---~~~~~~~---------l~~~---------~~~~~~ 57 (264)
T 3tfo_A 2 VMDKVILITGASGGIGEGIARELGVAG---AKILLGARRQAR---IEAIATE---------IRDA---------GGTALA 57 (264)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHHHTT---CEEEEEESSHHH---HHHHHHH---------HHHT---------TCEEEE
T ss_pred CCCCEEEEeCCccHHHHHHHHHHHHCC---CEEEEEECCHHH---HHHHHHH---------HHhc---------CCcEEE
Confidence 468999999999999999999999998 678888887422 2222211 1111 256889
Q ss_pred EeccCCCCCCCCChhhhHHHHh-------cCccEEEEcCccCCc-------cccHHHHHHHhHHHHHHHHHHHHhc---c
Q 010075 90 VPGDISSEDLGLKDSNLKEELW-------NELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKC---V 152 (519)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~-------~~vdiViH~Aa~v~f-------~~~~~~~~~~Nv~gt~~ll~~a~~~---~ 152 (519)
+.+|++++ +..+.+. .++|++||+||.... .+.++..+++|+.|+..+.+.+... .
T Consensus 58 ~~~Dv~d~-------~~v~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~ 130 (264)
T 3tfo_A 58 QVLDVTDR-------HSVAAFAQAAVDTWGRIDVLVNNAGVMPLSPLAAVKVDEWERMIDVNIKGVLWGIGAVLPIMEAQ 130 (264)
T ss_dssp EECCTTCH-------HHHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH
T ss_pred EEcCCCCH-------HHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhC
Confidence 99999963 2222333 379999999998643 2567888999999999888876432 2
Q ss_pred CCceEEEEecceeecCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcHHH
Q 010075 153 KLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYV 232 (519)
Q Consensus 153 ~l~~~V~vSTa~v~~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~Y~ 232 (519)
+..++|++||...+... .....|+
T Consensus 131 ~~g~IV~isS~~~~~~~--------------------------------------------------------~~~~~Y~ 154 (264)
T 3tfo_A 131 RSGQIINIGSIGALSVV--------------------------------------------------------PTAAVYC 154 (264)
T ss_dssp TCEEEEEECCGGGTCCC--------------------------------------------------------TTCHHHH
T ss_pred CCeEEEEEcCHHHcccC--------------------------------------------------------CCChhHH
Confidence 55799999997654321 1235799
Q ss_pred HHHHHHHHHHHHh---hcCCcEEEEecCccccCCCCCCCcccccccccHHHHHHhhcCCceeeccCCCceeeeeeHHHHH
Q 010075 233 FTKTMGEMLMQQS---KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVV 309 (519)
Q Consensus 233 ~sK~~aE~lv~~~---~~~lp~~IvRPs~V~g~~~~p~~gw~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~d~vpVDdva 309 (519)
.||+..+.+.+.. .+++.+..+.||.|.++....... . . .. ..... ...-....+|+|
T Consensus 155 asKaal~~l~~~la~e~~gIrvn~v~PG~v~T~~~~~~~~---~-~----~~-----~~~~~------~~~~~~~pedvA 215 (264)
T 3tfo_A 155 ATKFAVRAISDGLRQESTNIRVTCVNPGVVESELAGTITH---E-E----TM-----AAMDT------YRAIALQPADIA 215 (264)
T ss_dssp HHHHHHHHHHHHHHHHCSSEEEEEEEECCC------------------------------------------CCCHHHHH
T ss_pred HHHHHHHHHHHHHHHhCCCCEEEEEecCCCcCcccccccc---h-h----HH-----HHHHh------hhccCCCHHHHH
Confidence 9999999888765 248999999999987754321100 0 0 00 00000 001136799999
Q ss_pred HHHHHHHHHh
Q 010075 310 NAMIVAMVAH 319 (519)
Q Consensus 310 ~aii~a~~~~ 319 (519)
++++.++...
T Consensus 216 ~~v~~l~s~~ 225 (264)
T 3tfo_A 216 RAVRQVIEAP 225 (264)
T ss_dssp HHHHHHHHSC
T ss_pred HHHHHHhcCC
Confidence 9999998743
|
| >1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ... | Back alignment and structure |
|---|
Probab=99.69 E-value=3.7e-16 Score=155.11 Aligned_cols=199 Identities=15% Similarity=0.178 Sum_probs=136.7
Q ss_pred hhcCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCce
Q 010075 8 EFLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKI 87 (519)
Q Consensus 8 ~~~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v 87 (519)
..++||+|+||||||+||+++++.|++.| .+|+++.|+... .+.+.+ .+++. + ..++
T Consensus 24 ~~~~~k~vlITGasggIG~~la~~l~~~G---~~V~~~~r~~~~---~~~~~~---------~~~~~-~-------~~~~ 80 (286)
T 1xu9_A 24 EMLQGKKVIVTGASKGIGREMAYHLAKMG---AHVVVTARSKET---LQKVVS---------HCLEL-G-------AASA 80 (286)
T ss_dssp GGGTTCEEEESSCSSHHHHHHHHHHHHTT---CEEEEEESCHHH---HHHHHH---------HHHHH-T-------CSEE
T ss_pred hhcCCCEEEEeCCCcHHHHHHHHHHHHCC---CEEEEEECCHHH---HHHHHH---------HHHHh-C-------CCce
Confidence 45789999999999999999999999998 678999986422 122211 11111 1 1368
Q ss_pred EEEeccCCCCCCCCChhhhHHHHh-------cCccEEEEc-CccCCc------cccHHHHHHHhHHHHHHHHHHHHhc--
Q 010075 88 TFVPGDISSEDLGLKDSNLKEELW-------NELDIMVNS-AAITKF------DERYDVAFGINTLGVIHLVNFAKKC-- 151 (519)
Q Consensus 88 ~~v~gDl~~~~lgls~~~~~~~l~-------~~vdiViH~-Aa~v~f------~~~~~~~~~~Nv~gt~~ll~~a~~~-- 151 (519)
.++.+|++++ +..+.+. .++|+|||+ |+.... .+.++..+++|+.|+.++++.+...
T Consensus 81 ~~~~~Dl~d~-------~~v~~~~~~~~~~~g~iD~li~naag~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~ 153 (286)
T 1xu9_A 81 HYIAGTMEDM-------TFAEQFVAQAGKLMGGLDMLILNHITNTSLNLFHDDIHHVRKSMEVNFLSYVVLTVAALPMLK 153 (286)
T ss_dssp EEEECCTTCH-------HHHHHHHHHHHHHHTSCSEEEECCCCCCCCCCCCSCHHHHHHHHHHHTHHHHHHHHHHHHHHH
T ss_pred EEEeCCCCCH-------HHHHHHHHHHHHHcCCCCEEEECCccCCCCccccCCHHHHHHHHHHHhhHHHHHHHHHHHHHH
Confidence 8999999953 2222333 379999999 454322 2456778999999999998887543
Q ss_pred cCCceEEEEecceeecCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcHH
Q 010075 152 VKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTY 231 (519)
Q Consensus 152 ~~l~~~V~vSTa~v~~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~Y 231 (519)
++..++|++||...+... .....|
T Consensus 154 ~~~g~iv~isS~~~~~~~--------------------------------------------------------~~~~~Y 177 (286)
T 1xu9_A 154 QSNGSIVVVSSLAGKVAY--------------------------------------------------------PMVAAY 177 (286)
T ss_dssp HHTCEEEEEEEGGGTSCC--------------------------------------------------------TTCHHH
T ss_pred HCCCEEEEECCcccccCC--------------------------------------------------------CCccHH
Confidence 123689999998644211 224679
Q ss_pred HHHHHHHHHHHHHh-------hcCCcEEEEecCccccCCCCCCCcccccccccHHHHHHhhcCCceeeccCCCceeeeee
Q 010075 232 VFTKTMGEMLMQQS-------KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIP 304 (519)
Q Consensus 232 ~~sK~~aE~lv~~~-------~~~lp~~IvRPs~V~g~~~~p~~gw~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~d~vp 304 (519)
+.||+..|.+++.+ ..++.+++++||.|.++.. .....+ ......++
T Consensus 178 ~asK~a~~~~~~~l~~e~~~~~~~i~v~~v~Pg~v~t~~~-----------------~~~~~~---------~~~~~~~~ 231 (286)
T 1xu9_A 178 SASKFALDGFFSSIRKEYSVSRVNVSITLCVLGLIDTETA-----------------MKAVSG---------IVHMQAAP 231 (286)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTCCCEEEEEEECCBCCHHH-----------------HHHSCG---------GGGGGCBC
T ss_pred HHHHHHHHHHHHHHHHHHhhcCCCeEEEEeecCccCChhH-----------------HHhccc---------cccCCCCC
Confidence 99999999887654 2479999999998765321 000001 11234689
Q ss_pred HHHHHHHHHHHHHH
Q 010075 305 VDMVVNAMIVAMVA 318 (519)
Q Consensus 305 VDdva~aii~a~~~ 318 (519)
.+++|++++.++..
T Consensus 232 ~~~vA~~i~~~~~~ 245 (286)
T 1xu9_A 232 KEECALEIIKGGAL 245 (286)
T ss_dssp HHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHhc
Confidence 99999999998863
|
| >4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.69 E-value=8e-16 Score=152.49 Aligned_cols=206 Identities=14% Similarity=0.105 Sum_probs=135.0
Q ss_pred hcCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceE
Q 010075 9 FLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKIT 88 (519)
Q Consensus 9 ~~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~ 88 (519)
.++||+++||||+|+||++++++|++.| .+|+++.|+... .+.+.++ +.+.. ...+.
T Consensus 30 ~l~gk~~lVTGas~GIG~aia~~la~~G---~~V~~~~r~~~~---~~~~~~~---------~~~~~--------~~~~~ 86 (281)
T 4dry_A 30 SGEGRIALVTGGGTGVGRGIAQALSAEG---YSVVITGRRPDV---LDAAAGE---------IGGRT--------GNIVR 86 (281)
T ss_dssp ----CEEEETTTTSHHHHHHHHHHHHTT---CEEEEEESCHHH---HHHHHHH---------HHHHH--------SSCEE
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHCC---CEEEEEECCHHH---HHHHHHH---------HHhcC--------CCeEE
Confidence 4678999999999999999999999998 678999887422 1222211 11111 23468
Q ss_pred EEeccCCCCCCCCChhhhHHHHh-------cCccEEEEcCccCCc--------cccHHHHHHHhHHHHHHHHHHHHhc--
Q 010075 89 FVPGDISSEDLGLKDSNLKEELW-------NELDIMVNSAAITKF--------DERYDVAFGINTLGVIHLVNFAKKC-- 151 (519)
Q Consensus 89 ~v~gDl~~~~lgls~~~~~~~l~-------~~vdiViH~Aa~v~f--------~~~~~~~~~~Nv~gt~~ll~~a~~~-- 151 (519)
++.+|++++ +..+.++ .++|++||+||.... .+.++..+++|+.|+..+.+.+.+.
T Consensus 87 ~~~~Dv~d~-------~~v~~~~~~~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~ 159 (281)
T 4dry_A 87 AVVCDVGDP-------DQVAALFAAVRAEFARLDLLVNNAGSNVPPVPLEEVTFEQWNGIVAANLTGAFLCTQHAFRMMK 159 (281)
T ss_dssp EEECCTTCH-------HHHHHHHHHHHHHHSCCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHH
T ss_pred EEEcCCCCH-------HHHHHHHHHHHHHcCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHH
Confidence 999999963 2222333 478999999997532 2567888999999988888776542
Q ss_pred -c--CCceEEEEecceeecCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCC
Q 010075 152 -V--KLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWP 228 (519)
Q Consensus 152 -~--~l~~~V~vSTa~v~~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~ 228 (519)
. +-.++|++||....... ...
T Consensus 160 ~~~~~~g~IV~isS~~~~~~~--------------------------------------------------------~~~ 183 (281)
T 4dry_A 160 AQTPRGGRIINNGSISAQTPR--------------------------------------------------------PNS 183 (281)
T ss_dssp HSSSCCEEEEEECCGGGTCCC--------------------------------------------------------TTC
T ss_pred hcCCCCcEEEEECCHHhCCCC--------------------------------------------------------CCC
Confidence 1 14689999997543211 224
Q ss_pred cHHHHHHHHHHHHHHHh-----hcCCcEEEEecCccccCCCCCCCcccccccccHHHHHHhhcCCceeeccCCCceeeee
Q 010075 229 NTYVFTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVI 303 (519)
Q Consensus 229 n~Y~~sK~~aE~lv~~~-----~~~lp~~IvRPs~V~g~~~~p~~gw~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~d~v 303 (519)
..|+.||+..+.+.+.. ..++.+..++||.|..+.....+. . ... .........++
T Consensus 184 ~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~---~---------------~~~-~~~~~~~~~~~ 244 (281)
T 4dry_A 184 APYTATKHAITGLTKSTALDGRMHDIACGQIDIGNAATDMTARMST---G---------------VLQ-ANGEVAAEPTI 244 (281)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEECBCC-------C---E---------------EEC-TTSCEEECCCB
T ss_pred hhHHHHHHHHHHHHHHHHHHhcccCeEEEEEEECcCcChhhhhhcc---h---------------hhh-hhhcccccCCC
Confidence 67999999999888765 357999999999987764321110 0 000 00001122367
Q ss_pred eHHHHHHHHHHHHHHh
Q 010075 304 PVDMVVNAMIVAMVAH 319 (519)
Q Consensus 304 pVDdva~aii~a~~~~ 319 (519)
+.+|+|++++.++..+
T Consensus 245 ~pedvA~~v~fL~s~~ 260 (281)
T 4dry_A 245 PIEHIAEAVVYMASLP 260 (281)
T ss_dssp CHHHHHHHHHHHHHSC
T ss_pred CHHHHHHHHHHHhCCC
Confidence 8999999999998743
|
| >3gdg_A Probable NADP-dependent mannitol dehydrogenase; rossmann fold, beta-alpha-beta motifs, open twisted sheet, A NADP, oxidoreductase; 2.30A {Cladosporium herbarum} SCOP: c.2.1.0 PDB: 3gdf_A | Back alignment and structure |
|---|
Probab=99.69 E-value=6.9e-16 Score=151.35 Aligned_cols=223 Identities=9% Similarity=0.012 Sum_probs=150.6
Q ss_pred cCCCEEEEeCCc--cHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCce
Q 010075 10 LENKTILVSGVT--GFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKI 87 (519)
Q Consensus 10 ~~~k~VlITGaT--GFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v 87 (519)
++||+|+||||+ |+||++++++|++.| .+|+++.|+..... .+.+. .+.+.. ..++
T Consensus 18 l~~k~vlITGas~~~giG~~~a~~l~~~G---~~v~~~~~~~~~~~-~~~~~----------~l~~~~--------~~~~ 75 (267)
T 3gdg_A 18 LKGKVVVVTGASGPKGMGIEAARGCAEMG---AAVAITYASRAQGA-EENVK----------ELEKTY--------GIKA 75 (267)
T ss_dssp CTTCEEEETTCCSSSSHHHHHHHHHHHTS---CEEEECBSSSSSHH-HHHHH----------HHHHHH--------CCCE
T ss_pred cCCCEEEEECCCCCCChHHHHHHHHHHCC---CeEEEEeCCcchhH-HHHHH----------HHHHhc--------CCce
Confidence 689999999999 899999999999998 67888888764321 11111 111221 2578
Q ss_pred EEEeccCCCCCCCCChhhhHHHHh-------cCccEEEEcCccCCc-------cccHHHHHHHhHHHHHHHHHHHHhc--
Q 010075 88 TFVPGDISSEDLGLKDSNLKEELW-------NELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKC-- 151 (519)
Q Consensus 88 ~~v~gDl~~~~lgls~~~~~~~l~-------~~vdiViH~Aa~v~f-------~~~~~~~~~~Nv~gt~~ll~~a~~~-- 151 (519)
.++.+|++++ +..+.++ .++|++||+||.... .+.++..+++|+.|+.++++.+...
T Consensus 76 ~~~~~Dl~~~-------~~v~~~~~~~~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~ 148 (267)
T 3gdg_A 76 KAYKCQVDSY-------ESCEKLVKDVVADFGQIDAFIANAGATADSGILDGSVEAWNHVVQVDLNGTFHCAKAVGHHFK 148 (267)
T ss_dssp ECCBCCTTCH-------HHHHHHHHHHHHHTSCCSEEEECCCCCCCSCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHH
T ss_pred eEEecCCCCH-------HHHHHHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHhcchHHHHHHHHHHHHHH
Confidence 9999999963 2222332 368999999997642 2567888999999999999887331
Q ss_pred -cCCceEEEEecceeecCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcH
Q 010075 152 -VKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNT 230 (519)
Q Consensus 152 -~~l~~~V~vSTa~v~~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~ 230 (519)
.+..++|++||........ + .....
T Consensus 149 ~~~~g~iv~isS~~~~~~~~------------~------------------------------------------~~~~~ 174 (267)
T 3gdg_A 149 ERGTGSLVITASMSGHIANF------------P------------------------------------------QEQTS 174 (267)
T ss_dssp HHTCCEEEEECCGGGTSCCS------------S------------------------------------------SCCHH
T ss_pred HcCCceEEEEccccccccCC------------C------------------------------------------CCCCc
Confidence 2456899999975432110 0 12357
Q ss_pred HHHHHHHHHHHHHHh----hcCCcEEEEecCccccCCCCCCCcccccccccHHHHHHhhcCCceeeccCCCceeeeeeHH
Q 010075 231 YVFTKTMGEMLMQQS----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVD 306 (519)
Q Consensus 231 Y~~sK~~aE~lv~~~----~~~lp~~IvRPs~V~g~~~~p~~gw~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~d~vpVD 306 (519)
|+.||+..+.+++.. .+.+.+..+.||.|..+..... ......... .......+..++
T Consensus 175 Y~~sK~a~~~~~~~la~e~~~~i~v~~v~PG~v~t~~~~~~---------~~~~~~~~~---------~~~~~~r~~~~~ 236 (267)
T 3gdg_A 175 YNVAKAGCIHMARSLANEWRDFARVNSISPGYIDTGLSDFV---------PKETQQLWH---------SMIPMGRDGLAK 236 (267)
T ss_dssp HHHHHHHHHHHHHHHHHHTTTTCEEEEEEECCEECSCGGGS---------CHHHHHHHH---------TTSTTSSCEETH
T ss_pred chHHHHHHHHHHHHHHHHhccCcEEEEEECCccccchhhhC---------CHHHHHHHH---------hcCCCCCCcCHH
Confidence 999999999988765 3348999999999876543211 111111111 112234567899
Q ss_pred HHHHHHHHHHHHhccCCCCCcEEEecCC
Q 010075 307 MVVNAMIVAMVAHAKQPSDANIYHVGSS 334 (519)
Q Consensus 307 dva~aii~a~~~~~~~~~~~~iyni~s~ 334 (519)
|+|++++.++.... ..-.++++++.+|
T Consensus 237 dva~~~~~l~s~~~-~~itG~~i~vdgG 263 (267)
T 3gdg_A 237 ELKGAYVYFASDAS-TYTTGADLLIDGG 263 (267)
T ss_dssp HHHHHHHHHHSTTC-TTCCSCEEEESTT
T ss_pred HHHhHhheeecCcc-ccccCCEEEECCc
Confidence 99999998886322 2224789999887
|
| >3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.69 E-value=3.9e-16 Score=151.25 Aligned_cols=216 Identities=14% Similarity=0.116 Sum_probs=143.1
Q ss_pred CcchhhhcCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccc
Q 010075 3 LGSVVEFLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSF 82 (519)
Q Consensus 3 ~~~i~~~~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~ 82 (519)
++.-.+.++||+|+||||+|+||++++++|++.| .+|+++.|+... .+.+.++ +++..
T Consensus 5 ~~~~~~~l~~k~vlITGas~gIG~~ia~~l~~~G---~~V~~~~r~~~~---~~~~~~~---------~~~~~------- 62 (247)
T 3i1j_A 5 YSAHPELLKGRVILVTGAARGIGAAAARAYAAHG---ASVVLLGRTEAS---LAEVSDQ---------IKSAG------- 62 (247)
T ss_dssp CCCCTTTTTTCEEEESSTTSHHHHHHHHHHHHTT---CEEEEEESCHHH---HHHHHHH---------HHHTT-------
T ss_pred CCCCCccCCCCEEEEeCCCChHHHHHHHHHHHCC---CEEEEEecCHHH---HHHHHHH---------HHhcC-------
Confidence 4444566899999999999999999999999998 678999887422 1222211 11111
Q ss_pred cCCceEEEeccC--CCCCCCCChhhhHHHHh-------cCccEEEEcCccCCc--------cccHHHHHHHhHHHHHHHH
Q 010075 83 ISEKITFVPGDI--SSEDLGLKDSNLKEELW-------NELDIMVNSAAITKF--------DERYDVAFGINTLGVIHLV 145 (519)
Q Consensus 83 ~~~~v~~v~gDl--~~~~lgls~~~~~~~l~-------~~vdiViH~Aa~v~f--------~~~~~~~~~~Nv~gt~~ll 145 (519)
..++.++.+|+ ++ .+..+.+. .++|++||+||.... .+.++..+++|+.|+..++
T Consensus 63 -~~~~~~~~~d~d~~~-------~~~~~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~ 134 (247)
T 3i1j_A 63 -QPQPLIIALNLENAT-------AQQYRELAARVEHEFGRLDGLLHNASIIGPRTPLEQLPDEDFMQVMHVNVNATFMLT 134 (247)
T ss_dssp -SCCCEEEECCTTTCC-------HHHHHHHHHHHHHHHSCCSEEEECCCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHH
T ss_pred -CCCceEEEeccccCC-------HHHHHHHHHHHHHhCCCCCEEEECCccCCCCCCcccCCHHHHHHHHHHhhHHHHHHH
Confidence 24566777777 53 22222332 379999999997531 2567888999999999999
Q ss_pred HHHHhc---cCCceEEEEecceeecCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhcccccc
Q 010075 146 NFAKKC---VKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERA 222 (519)
Q Consensus 146 ~~a~~~---~~l~~~V~vSTa~v~~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~ 222 (519)
+.+... .+..++|++||.......
T Consensus 135 ~~~~~~~~~~~~~~iv~isS~~~~~~~----------------------------------------------------- 161 (247)
T 3i1j_A 135 RALLPLLKRSEDASIAFTSSSVGRKGR----------------------------------------------------- 161 (247)
T ss_dssp HHHHHHHTTSSSEEEEEECCGGGTSCC-----------------------------------------------------
T ss_pred HHHHHHHHhCCCCeEEEEcchhhcCCC-----------------------------------------------------
Confidence 988432 245789999997543211
Q ss_pred ccCCCCcHHHHHHHHHHHHHHHh-----h-cCCcEEEEecCccccCCCCCCCcccccccccHHHHHHhhcCCceeeccCC
Q 010075 223 KLHGWPNTYVFTKTMGEMLMQQS-----K-ENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGET 296 (519)
Q Consensus 223 ~~~~~~n~Y~~sK~~aE~lv~~~-----~-~~lp~~IvRPs~V~g~~~~p~~gw~~~~~~~~~~i~~~~~g~~~~~~~~~ 296 (519)
.....|+.||+..+.+++.+ . .++.+..+.||.|..+.. ......
T Consensus 162 ---~~~~~Y~~sK~a~~~~~~~la~e~~~~~~i~v~~v~PG~v~t~~~-----------------~~~~~~--------- 212 (247)
T 3i1j_A 162 ---ANWGAYGVSKFATEGLMQTLADELEGVTAVRANSINPGATRTGMR-----------------AQAYPD--------- 212 (247)
T ss_dssp ---TTCHHHHHHHHHHHHHHHHHHHHHTTTSSEEEEEEECCCCSSHHH-----------------HHHSTT---------
T ss_pred ---CCcchhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCcccCccc-----------------hhcccc---------
Confidence 22357999999999888754 2 578999999988755321 000000
Q ss_pred CceeeeeeHHHHHHHHHHHHHHhccCCCCCcEEEe
Q 010075 297 KVIMDVIPVDMVVNAMIVAMVAHAKQPSDANIYHV 331 (519)
Q Consensus 297 ~~~~d~vpVDdva~aii~a~~~~~~~~~~~~iyni 331 (519)
.....+...+|+|++++.++..... .-.++++++
T Consensus 213 ~~~~~~~~p~dva~~~~~l~s~~~~-~itG~~i~~ 246 (247)
T 3i1j_A 213 ENPLNNPAPEDIMPVYLYLMGPDST-GINGQALNA 246 (247)
T ss_dssp SCGGGSCCGGGGTHHHHHHHSGGGT-TCCSCEEEC
T ss_pred cCccCCCCHHHHHHHHHHHhCchhc-cccCeeecC
Confidence 1112345679999999998864322 223556554
|
| >3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=99.69 E-value=6.7e-16 Score=150.36 Aligned_cols=199 Identities=13% Similarity=0.099 Sum_probs=136.1
Q ss_pred cCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 010075 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (519)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (519)
+++|+++||||+|+||++++++|++.| .+|+++.|+... .+++.+ .+.+..+. ..++.+
T Consensus 5 ~~~k~~lVTGas~GIG~aia~~l~~~G---~~V~~~~r~~~~---~~~~~~---------~~~~~~~~------~~~~~~ 63 (250)
T 3nyw_A 5 KQKGLAIITGASQGIGAVIAAGLATDG---YRVVLIARSKQN---LEKVHD---------EIMRSNKH------VQEPIV 63 (250)
T ss_dssp CCCCEEEEESTTSHHHHHHHHHHHHHT---CEEEEEESCHHH---HHHHHH---------HHHHHCTT------SCCCEE
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCC---CEEEEEECCHHH---HHHHHH---------HHHHhccc------cCcceE
Confidence 578999999999999999999999999 688999887422 222221 11121110 156889
Q ss_pred EeccCCCCCCCCChhhhHHHHh-------cCccEEEEcCccCCc------cccHHHHHHHhHHHHHHHHHHHHhc---cC
Q 010075 90 VPGDISSEDLGLKDSNLKEELW-------NELDIMVNSAAITKF------DERYDVAFGINTLGVIHLVNFAKKC---VK 153 (519)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~-------~~vdiViH~Aa~v~f------~~~~~~~~~~Nv~gt~~ll~~a~~~---~~ 153 (519)
+.+|++++ +..+.++ .++|++||+||.... .+.++..+++|+.|+..+++.+... .+
T Consensus 64 ~~~Dv~~~-------~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~ 136 (250)
T 3nyw_A 64 LPLDITDC-------TKADTEIKDIHQKYGAVDILVNAAAMFMDGSLSEPVDNFRKIMEINVIAQYGILKTVTEIMKVQK 136 (250)
T ss_dssp EECCTTCH-------HHHHHHHHHHHHHHCCEEEEEECCCCCCCCCCSCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT
T ss_pred EeccCCCH-------HHHHHHHHHHHHhcCCCCEEEECCCcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 99999963 2222333 379999999997532 1457788999999999998887431 25
Q ss_pred CceEEEEecceeecCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcHHHH
Q 010075 154 LKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVF 233 (519)
Q Consensus 154 l~~~V~vSTa~v~~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~Y~~ 233 (519)
..++|++||....... .+...|+.
T Consensus 137 ~g~iv~isS~~~~~~~--------------------------------------------------------~~~~~Y~a 160 (250)
T 3nyw_A 137 NGYIFNVASRAAKYGF--------------------------------------------------------ADGGIYGS 160 (250)
T ss_dssp CEEEEEECC---------------------------------------------------------------CCTTHHHH
T ss_pred CeEEEEEccHHhcCCC--------------------------------------------------------CCCcchHH
Confidence 6799999997543210 12457999
Q ss_pred HHHHHHHHHHHh-----hcCCcEEEEecCccccCCCCCCCcccccccccHHHHHHhhcCCceeeccCCCceeeeeeHHHH
Q 010075 234 TKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMV 308 (519)
Q Consensus 234 sK~~aE~lv~~~-----~~~lp~~IvRPs~V~g~~~~p~~gw~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~d~vpVDdv 308 (519)
||+..+.+.+.. ..++++..++||.|..+... ... .......+++.+|+
T Consensus 161 sKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~-----------------~~~---------~~~~~~~~~~p~dv 214 (250)
T 3nyw_A 161 TKFALLGLAESLYRELAPLGIRVTTLCPGWVNTDMAK-----------------KAG---------TPFKDEEMIQPDDL 214 (250)
T ss_dssp HHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCSHHHH-----------------HTT---------CCSCGGGSBCHHHH
T ss_pred HHHHHHHHHHHHHHHhhhcCcEEEEEecCcccCchhh-----------------hcC---------CCcccccCCCHHHH
Confidence 999998888754 34799999999988654211 000 00112346889999
Q ss_pred HHHHHHHHHH
Q 010075 309 VNAMIVAMVA 318 (519)
Q Consensus 309 a~aii~a~~~ 318 (519)
|++++.++..
T Consensus 215 a~~v~~l~s~ 224 (250)
T 3nyw_A 215 LNTIRCLLNL 224 (250)
T ss_dssp HHHHHHHHTS
T ss_pred HHHHHHHHcC
Confidence 9999998863
|
| >3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus} | Back alignment and structure |
|---|
Probab=99.69 E-value=1.7e-16 Score=152.36 Aligned_cols=190 Identities=14% Similarity=0.136 Sum_probs=130.1
Q ss_pred CEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEEec
Q 010075 13 KTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVPG 92 (519)
Q Consensus 13 k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v~g 92 (519)
|+|+||||+|+||++++++|++.| .+|+++.|+... .+.+. ++ ...++.++.+
T Consensus 2 k~vlVTGas~gIG~~~a~~l~~~G---~~V~~~~r~~~~---~~~~~-------------~~--------~~~~~~~~~~ 54 (230)
T 3guy_A 2 SLIVITGASSGLGAELAKLYDAEG---KATYLTGRSESK---LSTVT-------------NC--------LSNNVGYRAR 54 (230)
T ss_dssp -CEEEESTTSHHHHHHHHHHHHTT---CCEEEEESCHHH---HHHHH-------------HT--------CSSCCCEEEC
T ss_pred CEEEEecCCchHHHHHHHHHHHCC---CEEEEEeCCHHH---HHHHH-------------HH--------HhhccCeEee
Confidence 679999999999999999999998 568898886421 11111 11 1357889999
Q ss_pred cCCCCCCCCChhhhHHHHhcC----ccEEEEcCccCCc-------cccHHHHHHHhHHHHHHHHHHHHhc--cCCceEEE
Q 010075 93 DISSEDLGLKDSNLKEELWNE----LDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKC--VKLKVFVH 159 (519)
Q Consensus 93 Dl~~~~lgls~~~~~~~l~~~----vdiViH~Aa~v~f-------~~~~~~~~~~Nv~gt~~ll~~a~~~--~~l~~~V~ 159 (519)
|+++ .+..+.++++ .|+|||+||.... .+.++..+++|+.|+.++++.+.+. ++-.++|+
T Consensus 55 D~~~-------~~~v~~~~~~~~~~~d~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~iv~ 127 (230)
T 3guy_A 55 DLAS-------HQEVEQLFEQLDSIPSTVVHSAGSGYFGLLQEQDPEQIQTLIENNLSSAINVLRELVKRYKDQPVNVVM 127 (230)
T ss_dssp CTTC-------HHHHHHHHHSCSSCCSEEEECCCCCCCSCGGGSCHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCEEEE
T ss_pred cCCC-------HHHHHHHHHHHhhcCCEEEEeCCcCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCeEEE
Confidence 9995 3334455544 4999999997532 2567788999999999999987653 12238999
Q ss_pred EecceeecCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcHHHHHHHHHH
Q 010075 160 VSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGE 239 (519)
Q Consensus 160 vSTa~v~~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~Y~~sK~~aE 239 (519)
+||...+... .....|+.||+..+
T Consensus 128 isS~~~~~~~--------------------------------------------------------~~~~~Y~asKaa~~ 151 (230)
T 3guy_A 128 IMSTAAQQPK--------------------------------------------------------AQESTYCAVKWAVK 151 (230)
T ss_dssp ECCGGGTSCC--------------------------------------------------------TTCHHHHHHHHHHH
T ss_pred EeecccCCCC--------------------------------------------------------CCCchhHHHHHHHH
Confidence 9997654321 22457999999999
Q ss_pred HHHHHh-----hcCCcEEEEecCccccCCCCCCCcccccccccHHHHHHhhcCCceeeccCCCceeeeeeHHHHHHHHHH
Q 010075 240 MLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMIV 314 (519)
Q Consensus 240 ~lv~~~-----~~~lp~~IvRPs~V~g~~~~p~~gw~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~d~vpVDdva~aii~ 314 (519)
.+.+.. ..++.+..+.||.|..+...... .......+++++|+|++++.
T Consensus 152 ~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~--------------------------~~~~~~~~~~~~dvA~~i~~ 205 (230)
T 3guy_A 152 GLIESVRLELKGKPMKIIAVYPGGMATEFWETSG--------------------------KSLDTSSFMSAEDAALMIHG 205 (230)
T ss_dssp HHHHHHHHHTTTSSCEEEEEEECCC------------------------------------------CCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcCeEEEEEECCcccChHHHhcC--------------------------CCCCcccCCCHHHHHHHHHH
Confidence 888765 34799999999988765331100 00113356889999999998
Q ss_pred HHHH
Q 010075 315 AMVA 318 (519)
Q Consensus 315 a~~~ 318 (519)
++..
T Consensus 206 l~~~ 209 (230)
T 3guy_A 206 ALAN 209 (230)
T ss_dssp HCCE
T ss_pred HHhC
Confidence 8753
|
| >1e7w_A Pteridine reductase; dihydrofolate reductase, shortchain dehydrogenase, methotrexate resistance, oxidoreductase; HET: NDP MTX; 1.75A {Leishmania major} SCOP: c.2.1.2 PDB: 1w0c_A* 1e92_A* 2bf7_A* 2bfa_A* 2bfm_A* 2bfo_A* 2bfp_A* 2p8k_A* 3h4v_A* 2xox_A 1p33_A* | Back alignment and structure |
|---|
Probab=99.68 E-value=1.3e-15 Score=151.75 Aligned_cols=225 Identities=15% Similarity=0.108 Sum_probs=147.6
Q ss_pred cCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEE-ecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceE
Q 010075 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFV-RAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKIT 88 (519)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~Lv-R~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~ 88 (519)
+++|+++||||+|+||+++++.|++.| .+|+++. |+... .+++.+ .+++.. ..++.
T Consensus 7 l~~k~~lVTGas~GIG~aia~~la~~G---~~V~~~~~r~~~~---~~~~~~---------~l~~~~--------~~~~~ 63 (291)
T 1e7w_A 7 PTVPVALVTGAAKRLGRSIAEGLHAEG---YAVCLHYHRSAAE---ANALSA---------TLNARR--------PNSAI 63 (291)
T ss_dssp -CCCEEEETTCSSHHHHHHHHHHHHTT---CEEEEEESSCHHH---HHHHHH---------HHHHHS--------TTCEE
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCC---CeEEEEcCCCHHH---HHHHHH---------HHhhhc--------CCeeE
Confidence 578999999999999999999999998 6788888 76421 222221 111111 25788
Q ss_pred EEeccCCCCCC-------CCCh---hhhHHHHh-------cCccEEEEcCccCCc---------------------cccH
Q 010075 89 FVPGDISSEDL-------GLKD---SNLKEELW-------NELDIMVNSAAITKF---------------------DERY 130 (519)
Q Consensus 89 ~v~gDl~~~~l-------gls~---~~~~~~l~-------~~vdiViH~Aa~v~f---------------------~~~~ 130 (519)
++.+|+++++. |..+ .+..+.++ .++|++||+||.... .+.+
T Consensus 64 ~~~~Dl~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 143 (291)
T 1e7w_A 64 TVQADLSNVATAPVSGADGSAPVTLFTRCAELVAACYTHWGRCDVLVNNASSFYPTPLLRNDEDGHEPCVGDREAMETAT 143 (291)
T ss_dssp EEECCCSSSCBCCCC----CCCBCHHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCCCC-------------HHHHHHH
T ss_pred EEEeecCCcccccccccccccccchHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCChhhcCccccccccccccccHHHH
Confidence 99999997540 0000 00122222 379999999997532 3456
Q ss_pred HHHHHHhHHHHHHHHHHHHhc---cC------CceEEEEecceeecCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhh
Q 010075 131 DVAFGINTLGVIHLVNFAKKC---VK------LKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELK 201 (519)
Q Consensus 131 ~~~~~~Nv~gt~~ll~~a~~~---~~------l~~~V~vSTa~v~~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~ 201 (519)
+..+++|+.|+..+++.+.+. .+ ..++|++||...+...
T Consensus 144 ~~~~~~N~~g~~~l~~~~~~~m~~~~~~~~~~~g~Iv~isS~~~~~~~-------------------------------- 191 (291)
T 1e7w_A 144 ADLFGSNAIAPYFLIKAFAHRVAGTPAKHRGTNYSIINMVDAMTNQPL-------------------------------- 191 (291)
T ss_dssp HHHHHHHTHHHHHHHHHHHHHHHTSCGGGSCSCEEEEEECCTTTTSCC--------------------------------
T ss_pred HHHHHHHhHHHHHHHHHHHHHHHhcCCCCCCCCcEEEEEechhhcCCC--------------------------------
Confidence 778999999999999887542 13 4789999998654311
Q ss_pred hcCCChHHHHHHHhhccccccccCCCCcHHHHHHHHHHHHHHHh-----hcCCcEEEEecCccccCCCCCCCcccccccc
Q 010075 202 TKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKT 276 (519)
Q Consensus 202 ~~~~~~~~~~~~~~~lg~~~~~~~~~~n~Y~~sK~~aE~lv~~~-----~~~lp~~IvRPs~V~g~~~~p~~gw~~~~~~ 276 (519)
.....|+.||+..+.+.+.. ..++.+..++||.|..+. + .+
T Consensus 192 ------------------------~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~-~-~~-------- 237 (291)
T 1e7w_A 192 ------------------------LGYTIYTMAKGALEGLTRSAALELAPLQIRVNGVGPGLSVLVD-D-MP-------- 237 (291)
T ss_dssp ------------------------TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCCGG-G-SC--------
T ss_pred ------------------------CCCchhHHHHHHHHHHHHHHHHHHHhcCeEEEEEeeCCccCCc-c-CC--------
Confidence 12357999999999888754 357999999999986653 2 11
Q ss_pred cHHHHHHhhcCCceeeccCCCcee-eeeeHHHHHHHHHHHHHHhccCCCCCcEEEecCC
Q 010075 277 INTLFVASAQGNLRCLVGETKVIM-DVIPVDMVVNAMIVAMVAHAKQPSDANIYHVGSS 334 (519)
Q Consensus 277 ~~~~i~~~~~g~~~~~~~~~~~~~-d~vpVDdva~aii~a~~~~~~~~~~~~iyni~s~ 334 (519)
........... + .. -+...+|+|++++.++.... ..-.++++++.+|
T Consensus 238 -~~~~~~~~~~~----p-----~~~r~~~pedvA~~v~~l~s~~~-~~itG~~i~vdGG 285 (291)
T 1e7w_A 238 -PAVWEGHRSKV----P-----LYQRDSSAAEVSDVVIFLCSSKA-KYITGTCVKVDGG 285 (291)
T ss_dssp -HHHHHHHHTTC----T-----TTTSCBCHHHHHHHHHHHHSGGG-TTCCSCEEEESTT
T ss_pred -HHHHHHHHhhC----C-----CCCCCCCHHHHHHHHHHHhCCcc-cCccCcEEEECCC
Confidence 11111111110 1 11 25678999999999886432 2224678888877
|
| >3uce_A Dehydrogenase; rossmann fold, oxidoreductase; HET: NDP; 1.80A {Vibrio vulnificus} | Back alignment and structure |
|---|
Probab=99.68 E-value=2.9e-16 Score=150.08 Aligned_cols=202 Identities=10% Similarity=0.039 Sum_probs=140.7
Q ss_pred cCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 010075 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (519)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (519)
+++|+++||||+|+||++++++|++.| .+|+++.|+. +
T Consensus 4 ~~~k~vlVTGas~gIG~~~a~~l~~~G---~~V~~~~r~~-----------------------------------~---- 41 (223)
T 3uce_A 4 SDKTVYVVLGGTSGIGAELAKQLESEH---TIVHVASRQT-----------------------------------G---- 41 (223)
T ss_dssp -CCEEEEEETTTSHHHHHHHHHHCSTT---EEEEEESGGG-----------------------------------T----
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCC---CEEEEecCCc-----------------------------------c----
Confidence 468999999999999999999999988 6788887752 1
Q ss_pred EeccCCCCCCCCChhhhHHHHh---cCccEEEEcCccCC-c-------cccHHHHHHHhHHHHHHHHHHHHhc-cCCceE
Q 010075 90 VPGDISSEDLGLKDSNLKEELW---NELDIMVNSAAITK-F-------DERYDVAFGINTLGVIHLVNFAKKC-VKLKVF 157 (519)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~---~~vdiViH~Aa~v~-f-------~~~~~~~~~~Nv~gt~~ll~~a~~~-~~l~~~ 157 (519)
+|+++ .+..+.+. .++|++||+||... . .+.++..+++|+.|+..+++.+.+. .+-.++
T Consensus 42 --~D~~~-------~~~v~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~i 112 (223)
T 3uce_A 42 --LDISD-------EKSVYHYFETIGAFDHLIVTAGSYAPAGKVVDVEVTQAKYAFDTKFWGAVLAAKHGARYLKQGGSI 112 (223)
T ss_dssp --CCTTC-------HHHHHHHHHHHCSEEEEEECCCCCCCCSCTTTSCHHHHHHHHHHHHHHHHHHHHHHGGGEEEEEEE
T ss_pred --cCCCC-------HHHHHHHHHHhCCCCEEEECCCCCCCCCCcccCCHHHHHhhheeeeeeHHHHHHHHHhhccCCeEE
Confidence 68885 33333444 47999999999752 1 2567788999999999999998763 223589
Q ss_pred EEEecceeecCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcHHHHHHHH
Q 010075 158 VHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTM 237 (519)
Q Consensus 158 V~vSTa~v~~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~Y~~sK~~ 237 (519)
|++||...+... .....|+.||+.
T Consensus 113 v~~sS~~~~~~~--------------------------------------------------------~~~~~Y~asK~a 136 (223)
T 3uce_A 113 TLTSGMLSRKVV--------------------------------------------------------ANTYVKAAINAA 136 (223)
T ss_dssp EEECCGGGTSCC--------------------------------------------------------TTCHHHHHHHHH
T ss_pred EEecchhhccCC--------------------------------------------------------CCchHHHHHHHH
Confidence 999998654321 224579999999
Q ss_pred HHHHHHHh---hcCCcEEEEecCccccCCCCCCCcccccccccHHHHHHhhcCCceeeccCCCceeeeeeHHHHHHHHHH
Q 010075 238 GEMLMQQS---KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMIV 314 (519)
Q Consensus 238 aE~lv~~~---~~~lp~~IvRPs~V~g~~~~p~~gw~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~d~vpVDdva~aii~ 314 (519)
.|.+.+.. ...+++..++||.|.++.....+. .....+......+ .....+..++|+|++++.
T Consensus 137 ~~~~~~~la~e~~~i~vn~v~PG~v~t~~~~~~~~-----~~~~~~~~~~~~~---------~~~~~~~~~~dvA~~~~~ 202 (223)
T 3uce_A 137 IEATTKVLAKELAPIRVNAISPGLTKTEAYKGMNA-----DDRDAMYQRTQSH---------LPVGKVGEASDIAMAYLF 202 (223)
T ss_dssp HHHHHHHHHHHHTTSEEEEEEECSBCSGGGTTSCH-----HHHHHHHHHHHHH---------STTCSCBCHHHHHHHHHH
T ss_pred HHHHHHHHHHhhcCcEEEEEEeCCCcchhhhhcch-----hhHHHHHHHHhhc---------CCCCCccCHHHHHHHHHH
Confidence 99988765 123999999999998765432211 0011111111111 122346789999999999
Q ss_pred HHHHhccCCCCCcEEEecCCC
Q 010075 315 AMVAHAKQPSDANIYHVGSSL 335 (519)
Q Consensus 315 a~~~~~~~~~~~~iyni~s~~ 335 (519)
++... .-.++++++.+|.
T Consensus 203 l~~~~---~~tG~~i~vdgG~ 220 (223)
T 3uce_A 203 AIQNS---YMTGTVIDVDGGA 220 (223)
T ss_dssp HHHCT---TCCSCEEEESTTG
T ss_pred HccCC---CCCCcEEEecCCe
Confidence 88632 2247899998873
|
| >1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.68 E-value=1.1e-15 Score=149.76 Aligned_cols=167 Identities=15% Similarity=0.157 Sum_probs=121.0
Q ss_pred hcCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceE
Q 010075 9 FLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKIT 88 (519)
Q Consensus 9 ~~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~ 88 (519)
-+++|+++||||+|+||++++++|++.| .+|+++.|+... .+.+.++ +++. ..++.
T Consensus 4 ~l~~k~vlVTGas~gIG~~ia~~l~~~G---~~V~~~~r~~~~---~~~~~~~---------~~~~---------~~~~~ 59 (262)
T 1zem_A 4 KFNGKVCLVTGAGGNIGLATALRLAEEG---TAIALLDMNREA---LEKAEAS---------VREK---------GVEAR 59 (262)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHTT---CEEEEEESCHHH---HHHHHHH---------HHTT---------TSCEE
T ss_pred ccCCCEEEEeCCCcHHHHHHHHHHHHCC---CEEEEEeCCHHH---HHHHHHH---------HHhc---------CCcEE
Confidence 3678999999999999999999999998 678888886421 1222211 1110 24688
Q ss_pred EEeccCCCCCCCCChhhhHHHHh-------cCccEEEEcCccC-C---c----cccHHHHHHHhHHHHHHHHHHHHhc--
Q 010075 89 FVPGDISSEDLGLKDSNLKEELW-------NELDIMVNSAAIT-K---F----DERYDVAFGINTLGVIHLVNFAKKC-- 151 (519)
Q Consensus 89 ~v~gDl~~~~lgls~~~~~~~l~-------~~vdiViH~Aa~v-~---f----~~~~~~~~~~Nv~gt~~ll~~a~~~-- 151 (519)
++.+|++++ +..+.++ .++|+|||+||.. . + .+.++..+++|+.|+.++++.+.+.
T Consensus 60 ~~~~D~~~~-------~~~~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~ 132 (262)
T 1zem_A 60 SYVCDVTSE-------EAVIGTVDSVVRDFGKIDFLFNNAGYQGAFAPVQDYPSDDFARVLTINVTGAFHVLKAVSRQMI 132 (262)
T ss_dssp EEECCTTCH-------HHHHHHHHHHHHHHSCCCEEEECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHH
T ss_pred EEEecCCCH-------HHHHHHHHHHHHHhCCCCEEEECCCCCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHH
Confidence 999999963 2222332 3799999999975 2 1 2457888999999999999887652
Q ss_pred -cCCceEEEEecceeecCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcH
Q 010075 152 -VKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNT 230 (519)
Q Consensus 152 -~~l~~~V~vSTa~v~~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~ 230 (519)
.+..++|++||...+... .....
T Consensus 133 ~~~~g~iv~isS~~~~~~~--------------------------------------------------------~~~~~ 156 (262)
T 1zem_A 133 TQNYGRIVNTASMAGVKGP--------------------------------------------------------PNMAA 156 (262)
T ss_dssp HHTCEEEEEECCHHHHSCC--------------------------------------------------------TTBHH
T ss_pred hcCCcEEEEEcchhhccCC--------------------------------------------------------CCCch
Confidence 245799999997654311 12357
Q ss_pred HHHHHHHHHHHHHHh-----hcCCcEEEEecCccccC
Q 010075 231 YVFTKTMGEMLMQQS-----KENLSLVIIRPTVVSGT 262 (519)
Q Consensus 231 Y~~sK~~aE~lv~~~-----~~~lp~~IvRPs~V~g~ 262 (519)
|+.||+..+.+.+.. ..++++.+++||.|..+
T Consensus 157 Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~ 193 (262)
T 1zem_A 157 YGTSKGAIIALTETAALDLAPYNIRVNAISPGYMGPG 193 (262)
T ss_dssp HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSS
T ss_pred HHHHHHHHHHHHHHHHHHHHhhCeEEEEEecCCcCcc
Confidence 999998888777654 45899999999988664
|
| >2fr1_A Erythromycin synthase, eryai; short chain dehydrogenase/reductase, oxidoreductase; HET: NDP; 1.79A {Saccharopolyspora erythraea} SCOP: c.2.1.2 c.2.1.2 PDB: 2fr0_A* | Back alignment and structure |
|---|
Probab=99.67 E-value=1.8e-15 Score=161.27 Aligned_cols=204 Identities=20% Similarity=0.173 Sum_probs=142.9
Q ss_pred hcCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceE
Q 010075 9 FLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKIT 88 (519)
Q Consensus 9 ~~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~ 88 (519)
+-.+++||||||||+||.++++.|++.|. .+|+++.|+.......+++.+++ ++ ...++.
T Consensus 223 ~~~~~~vLITGgtGgIG~~la~~La~~G~--~~vvl~~R~~~~~~~~~~l~~~l---------~~---------~g~~v~ 282 (486)
T 2fr1_A 223 WKPTGTVLVTGGTGGVGGQIARWLARRGA--PHLLLVSRSGPDADGAGELVAEL---------EA---------LGARTT 282 (486)
T ss_dssp CCCCSEEEEETTTSHHHHHHHHHHHHHTC--SEEEEEESSGGGSTTHHHHHHHH---------HH---------TTCEEE
T ss_pred cCCCCEEEEECCCCHHHHHHHHHHHHcCC--CEEEEEcCCCCCcHHHHHHHHHH---------Hh---------cCCEEE
Confidence 45689999999999999999999999984 36899999864332233332211 11 125789
Q ss_pred EEeccCCCCCCCCChhhhHHHHhcC------ccEEEEcCccCCc-------cccHHHHHHHhHHHHHHHHHHHHhccCCc
Q 010075 89 FVPGDISSEDLGLKDSNLKEELWNE------LDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKCVKLK 155 (519)
Q Consensus 89 ~v~gDl~~~~lgls~~~~~~~l~~~------vdiViH~Aa~v~f-------~~~~~~~~~~Nv~gt~~ll~~a~~~~~l~ 155 (519)
++.+|+++ .+....++++ +|+|||+||.... .+.++..+++|+.|+.++.+++... +++
T Consensus 283 ~~~~Dv~d-------~~~v~~~~~~i~~~g~ld~VIh~AG~~~~~~l~~~~~~~~~~~~~~nv~g~~~L~~~~~~~-~~~ 354 (486)
T 2fr1_A 283 VAACDVTD-------RESVRELLGGIGDDVPLSAVFHAAATLDDGTVDTLTGERIERASRAKVLGARNLHELTREL-DLT 354 (486)
T ss_dssp EEECCTTC-------HHHHHHHHHTSCTTSCEEEEEECCCCCCCCCGGGCCHHHHHHHTHHHHHHHHHHHHHHTTS-CCS
T ss_pred EEEeCCCC-------HHHHHHHHHHHHhcCCCcEEEECCccCCCCccccCCHHHHHHHHHHHHHHHHHHHHHhCcC-CCC
Confidence 99999995 3333455544 5999999997643 2456778899999999999999886 789
Q ss_pred eEEEEecceeecCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcHHHHHH
Q 010075 156 VFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTK 235 (519)
Q Consensus 156 ~~V~vSTa~v~~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~Y~~sK 235 (519)
+||++||....... .....|+.+|
T Consensus 355 ~~V~~SS~a~~~g~--------------------------------------------------------~g~~~Yaaak 378 (486)
T 2fr1_A 355 AFVLFSSFASAFGA--------------------------------------------------------PGLGGYAPGN 378 (486)
T ss_dssp EEEEEEEHHHHTCC--------------------------------------------------------TTCTTTHHHH
T ss_pred EEEEEcChHhcCCC--------------------------------------------------------CCCHHHHHHH
Confidence 99999997543211 1124699999
Q ss_pred HHHHHHHHHh-hcCCcEEEEecCccccCCCCCCCcccccccccHHHHHHhhcCCceeeccCCCceeeeeeHHHHHHHHHH
Q 010075 236 TMGEMLMQQS-KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMIV 314 (519)
Q Consensus 236 ~~aE~lv~~~-~~~lp~~IvRPs~V~g~~~~p~~gw~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~d~vpVDdva~aii~ 314 (519)
+..+.+..+. ..++++++++||.+.+... ... ... . .+. ..-...++.+++++++..
T Consensus 379 a~l~~la~~~~~~gi~v~~i~pG~~~~~gm------~~~------~~~----~---~~~---~~g~~~i~~e~~a~~l~~ 436 (486)
T 2fr1_A 379 AYLDGLAQQRRSDGLPATAVAWGTWAGSGM------AEG------PVA----D---RFR---RHGVIEMPPETACRALQN 436 (486)
T ss_dssp HHHHHHHHHHHHTTCCCEEEEECCBC-------------------------------CT---TTTEECBCHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcCCeEEEEECCeeCCCcc------cch------hHH----H---HHH---hcCCCCCCHHHHHHHHHH
Confidence 9999988766 5689999999998866421 000 000 0 000 112457999999999999
Q ss_pred HHHH
Q 010075 315 AMVA 318 (519)
Q Consensus 315 a~~~ 318 (519)
++..
T Consensus 437 ~l~~ 440 (486)
T 2fr1_A 437 ALDR 440 (486)
T ss_dssp HHHT
T ss_pred HHhC
Confidence 9864
|
| >3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.67 E-value=4.5e-15 Score=148.27 Aligned_cols=216 Identities=16% Similarity=0.159 Sum_probs=124.9
Q ss_pred hhcCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCce
Q 010075 8 EFLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKI 87 (519)
Q Consensus 8 ~~~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v 87 (519)
...++|+|+||||+|+||++++++|++.| .+|++..|+.... +... +.+++.. ..++
T Consensus 8 ~~~~~k~vlITGas~GIG~~~a~~L~~~G---~~V~~~~r~~~~~---~~~~---------~~l~~~~--------~~~~ 64 (311)
T 3o26_A 8 TVTKRRCAVVTGGNKGIGFEICKQLSSNG---IMVVLTCRDVTKG---HEAV---------EKLKNSN--------HENV 64 (311)
T ss_dssp ----CCEEEESSCSSHHHHHHHHHHHHTT---CEEEEEESCHHHH---HHHH---------HHHHTTT--------CCSE
T ss_pred ccCCCcEEEEecCCchHHHHHHHHHHHCC---CEEEEEeCCHHHH---HHHH---------HHHHhcC--------CCce
Confidence 45679999999999999999999999998 6889999974321 1111 1122211 2578
Q ss_pred EEEeccCCCC-CCCCChhhhHHHHhcCccEEEEcCccCCc-------------------------------------ccc
Q 010075 88 TFVPGDISSE-DLGLKDSNLKEELWNELDIMVNSAAITKF-------------------------------------DER 129 (519)
Q Consensus 88 ~~v~gDl~~~-~lgls~~~~~~~l~~~vdiViH~Aa~v~f-------------------------------------~~~ 129 (519)
.++.+|++++ ...-...+.......++|+|||+||.... .+.
T Consensus 65 ~~~~~Dl~~~~~~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 144 (311)
T 3o26_A 65 VFHQLDVTDPIATMSSLADFIKTHFGKLDILVNNAGVAGFSVDADRFKAMISDIGEDSEELVKIYEKPEAQELMSETYEL 144 (311)
T ss_dssp EEEECCTTSCHHHHHHHHHHHHHHHSSCCEEEECCCCCSCEECHHHHHHHHHHHCSSTTHHHHHTTSHHHHTTEECCHHH
T ss_pred EEEEccCCCcHHHHHHHHHHHHHhCCCCCEEEECCcccccccccchhhhcccccccchhhcchhhcccchhcccccchhh
Confidence 9999999964 21000001111223479999999997632 134
Q ss_pred HHHHHHHhHHHHHHHHHHHHhc---cCCceEEEEecceeecCcCC-eeecccCCCCCCCChHHHHHHHHHHHhhhhhcCC
Q 010075 130 YDVAFGINTLGVIHLVNFAKKC---VKLKVFVHVSTAYVAGERTG-LILENPLDGASGLDFDAEMKVIDQKLNELKTKGA 205 (519)
Q Consensus 130 ~~~~~~~Nv~gt~~ll~~a~~~---~~l~~~V~vSTa~v~~~~~~-~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~ 205 (519)
++..+++|+.|+..+++.+... .+..++|++||......... .-.+..+.......................
T Consensus 145 ~~~~~~~N~~g~~~l~~~~~~~l~~~~~~~IV~isS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---- 220 (311)
T 3o26_A 145 AEECLKINYNGVKSVTEVLIPLLQLSDSPRIVNVSSSTGSLKYVSNETALEILGDGDALTEERIDMVVNMLLKDFK---- 220 (311)
T ss_dssp HHHHHHHHTHHHHHHHHHHHHHHTTSSSCEEEEECCGGGSGGGCCCHHHHHHHHCGGGCCHHHHHHHHHHHHHHHH----
T ss_pred hhhheeeeeehHHHHHHHhhHhhccCCCCeEEEEecCCcccccccchhhhhhhccccccchhHHHHHHHHHHhhhh----
Confidence 5667999999999988887542 24579999999765432110 000000000011111111111110000000
Q ss_pred ChHHHHHHHhhccccccccCCC---CcHHHHHHHHHHHHHHHh---hcCCcEEEEecCccccCC
Q 010075 206 PQKEITLFMKNLGTERAKLHGW---PNTYVFTKTMGEMLMQQS---KENLSLVIIRPTVVSGTY 263 (519)
Q Consensus 206 ~~~~~~~~~~~lg~~~~~~~~~---~n~Y~~sK~~aE~lv~~~---~~~lp~~IvRPs~V~g~~ 263 (519)
.......++ ...|+.||+..+.+.+.+ ..++.+..+.||.|..+.
T Consensus 221 -------------~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~e~~~i~v~~v~PG~v~T~~ 271 (311)
T 3o26_A 221 -------------ENLIETNGWPSFGAAYTTSKACLNAYTRVLANKIPKFQVNCVCPGLVKTEM 271 (311)
T ss_dssp -------------TTCTTTTTCCSSCHHHHHHHHHHHHHHHHHHHHCTTSEEEEECCCSBCSGG
T ss_pred -------------ccccccccCcccchhhHHHHHHHHHHHHHHHhhcCCceEEEecCCceecCC
Confidence 000011122 257999999999998876 235899999999886643
|
| >3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.66 E-value=3.1e-15 Score=152.63 Aligned_cols=216 Identities=15% Similarity=0.166 Sum_probs=145.0
Q ss_pred hhcCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccH----HHHHHHHHhhhhhHHHHHhhhcccccccc
Q 010075 8 EFLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSA----ALRFQNEVLAKDVFNVLKEKWGTRLNSFI 83 (519)
Q Consensus 8 ~~~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~----~~rl~~~~~~~~~f~~l~~~~~~~~~~~~ 83 (519)
.-++||+||||||+|+||++++++|++.| .+|+++.|+...... .++..++ +++ .
T Consensus 41 ~~l~gk~vlVTGas~GIG~aia~~La~~G---a~Vvl~~r~~~~~~~l~~~l~~~~~~---------~~~---------~ 99 (346)
T 3kvo_A 41 GRLAGCTVFITGASRGIGKAIALKAAKDG---ANIVIAAKTAQPHPKLLGTIYTAAEE---------IEA---------V 99 (346)
T ss_dssp STTTTCEEEEETTTSHHHHHHHHHHHTTT---CEEEEEESCCSCCSSSCCCHHHHHHH---------HHH---------T
T ss_pred CCCCCCEEEEeCCChHHHHHHHHHHHHCC---CEEEEEECChhhhhhhHHHHHHHHHH---------HHh---------c
Confidence 34689999999999999999999999998 688999998654211 1111111 111 1
Q ss_pred CCceEEEeccCCCCCCCCChhhhHHHHh-------cCccEEEEcCccCCc-------cccHHHHHHHhHHHHHHHHHHHH
Q 010075 84 SEKITFVPGDISSEDLGLKDSNLKEELW-------NELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAK 149 (519)
Q Consensus 84 ~~~v~~v~gDl~~~~lgls~~~~~~~l~-------~~vdiViH~Aa~v~f-------~~~~~~~~~~Nv~gt~~ll~~a~ 149 (519)
..++.++.+|++++ +..+.++ .++|+|||+||.... .+.++..+++|+.|+..+++.+.
T Consensus 100 g~~~~~~~~Dv~d~-------~~v~~~~~~~~~~~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l 172 (346)
T 3kvo_A 100 GGKALPCIVDVRDE-------QQISAAVEKAIKKFGGIDILVNNASAISLTNTLDTPTKRLDLMMNVNTRGTYLASKACI 172 (346)
T ss_dssp TCEEEEEECCTTCH-------HHHHHHHHHHHHHHSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred CCeEEEEEccCCCH-------HHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHH
Confidence 35788999999963 3233333 379999999997542 25678889999999999999885
Q ss_pred hc---cCCceEEEEecceeecCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCC
Q 010075 150 KC---VKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHG 226 (519)
Q Consensus 150 ~~---~~l~~~V~vSTa~v~~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~ 226 (519)
.. .+..++|++||........ + .
T Consensus 173 p~m~~~~~g~IV~iSS~~~~~~~~-------~-----------------------------------------------~ 198 (346)
T 3kvo_A 173 PYLKKSKVAHILNISPPLNLNPVW-------F-----------------------------------------------K 198 (346)
T ss_dssp HHHTTCSSCEEEEECCCCCCCGGG-------T-----------------------------------------------S
T ss_pred HHHHHCCCCEEEEECCHHHcCCCC-------C-----------------------------------------------C
Confidence 42 2457999999976543210 0 2
Q ss_pred CCcHHHHHHHHHHHHHHHh----hcCCcEEEEecCccccCCCCCCCcccccccccHHHHHHhhcCCceeeccCCCceeee
Q 010075 227 WPNTYVFTKTMGEMLMQQS----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDV 302 (519)
Q Consensus 227 ~~n~Y~~sK~~aE~lv~~~----~~~lp~~IvRPs~V~g~~~~p~~gw~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~d~ 302 (519)
....|+.||+..+.+++.. ..++.+..+.|+.+..+. +.... .+ ......+
T Consensus 199 ~~~~Y~aSKaal~~l~~~la~e~~~gIrvn~v~PG~~i~T~----------------~~~~~-~~--------~~~~~r~ 253 (346)
T 3kvo_A 199 QHCAYTIAKYGMSMYVLGMAEEFKGEIAVNALWPKTAIHTA----------------AMDML-GG--------PGIESQC 253 (346)
T ss_dssp SSHHHHHHHHHHHHHHHHHHHHTTTTCEEEEEECSBCBCCH----------------HHHHH-CC----------CGGGC
T ss_pred CchHHHHHHHHHHHHHHHHHHHhcCCcEEEEEeCCCccccH----------------HHHhh-cc--------ccccccC
Confidence 2457999999999888765 357999999998533321 01111 01 1112235
Q ss_pred eeHHHHHHHHHHHHHHhccCCCCCcEEEecC
Q 010075 303 IPVDMVVNAMIVAMVAHAKQPSDANIYHVGS 333 (519)
Q Consensus 303 vpVDdva~aii~a~~~~~~~~~~~~iyni~s 333 (519)
...+|+|++++.++.. . ..-.++++ +.+
T Consensus 254 ~~pedvA~~v~~L~s~-~-~~itG~~i-vdg 281 (346)
T 3kvo_A 254 RKVDIIADAAYSIFQK-P-KSFTGNFV-IDE 281 (346)
T ss_dssp BCTHHHHHHHHHHHTS-C-TTCCSCEE-EHH
T ss_pred CCHHHHHHHHHHHHhc-C-CCCCceEE-ECC
Confidence 6789999999999864 2 22235555 533
|
| >3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV} | Back alignment and structure |
|---|
Probab=99.66 E-value=3.7e-15 Score=147.02 Aligned_cols=212 Identities=13% Similarity=0.113 Sum_probs=140.6
Q ss_pred cCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCccc----HHHHHHHHHhhhhhHHHHHhhhccccccccCC
Q 010075 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDS----AALRFQNEVLAKDVFNVLKEKWGTRLNSFISE 85 (519)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~----~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~ 85 (519)
++||+++||||+|+||++++++|++.| .+|+++.|+..... ..+...++ ++.. ..
T Consensus 4 l~~k~~lVTGas~GIG~aia~~la~~G---~~V~~~~r~~~~~~~~~~~~~~~~~~---------~~~~---------~~ 62 (274)
T 3e03_A 4 LSGKTLFITGASRGIGLAIALRAARDG---ANVAIAAKSAVANPKLPGTIHSAAAA---------VNAA---------GG 62 (274)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTT---CEEEEEESCCSCCTTSCCCHHHHHHH---------HHHH---------TS
T ss_pred CCCcEEEEECCCChHHHHHHHHHHHCC---CEEEEEeccchhhhhhHHHHHHHHHH---------HHhc---------CC
Confidence 578999999999999999999999998 68899999865321 11111111 1111 36
Q ss_pred ceEEEeccCCCCCCCCChhhhHHHHh-------cCccEEEEcCccCCc-------cccHHHHHHHhHHHHHHHHHHHHhc
Q 010075 86 KITFVPGDISSEDLGLKDSNLKEELW-------NELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKC 151 (519)
Q Consensus 86 ~v~~v~gDl~~~~lgls~~~~~~~l~-------~~vdiViH~Aa~v~f-------~~~~~~~~~~Nv~gt~~ll~~a~~~ 151 (519)
++.++.+|++++ +..+.++ .++|++||+||.... .+.++..+++|+.|+..+.+.+...
T Consensus 63 ~~~~~~~Dv~~~-------~~v~~~~~~~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~ 135 (274)
T 3e03_A 63 QGLALKCDIREE-------DQVRAAVAATVDTFGGIDILVNNASAIWLRGTLDTPMKRFDLMQQVNARGSFVCAQACLPH 135 (274)
T ss_dssp EEEEEECCTTCH-------HHHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGSCHHHHHHHHHHTHHHHHHHHHHHHHH
T ss_pred eEEEEeCCCCCH-------HHHHHHHHHHHHHcCCCCEEEECCCcccCCCcccCCHHHHHHHHhHhhHhHHHHHHHHHHH
Confidence 789999999963 2222333 379999999997532 2567888999999999999887542
Q ss_pred ---cCCceEEEEecceeecCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCC
Q 010075 152 ---VKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWP 228 (519)
Q Consensus 152 ---~~l~~~V~vSTa~v~~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~ 228 (519)
.+..++|++||........ + ...
T Consensus 136 m~~~~~g~iv~isS~~~~~~~~-------~-----------------------------------------------~~~ 161 (274)
T 3e03_A 136 LLQAPNPHILTLAPPPSLNPAW-------W-----------------------------------------------GAH 161 (274)
T ss_dssp HTTSSSCEEEECCCCCCCCHHH-------H-----------------------------------------------HHC
T ss_pred HHhcCCceEEEECChHhcCCCC-------C-----------------------------------------------CCC
Confidence 2456899999975442100 0 123
Q ss_pred cHHHHHHHHHHHHHHHh-----hcCCcEEEEecCccccCCCCCCCcccccccccHHHHHHhhcCCceeeccCCCceeeee
Q 010075 229 NTYVFTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVI 303 (519)
Q Consensus 229 n~Y~~sK~~aE~lv~~~-----~~~lp~~IvRPs~V~g~~~~p~~gw~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~d~v 303 (519)
..|+.||+..+.+.+.. ..++.+..+.||.+..+.. . .. ..+ .....+.
T Consensus 162 ~~Y~asKaal~~l~~~la~e~~~~gI~vn~v~PG~~v~T~~---~---~~-----------~~~---------~~~~~~~ 215 (274)
T 3e03_A 162 TGYTLAKMGMSLVTLGLAAEFGPQGVAINALWPRTVIATDA---I---NM-----------LPG---------VDAAACR 215 (274)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEECSBCBCC------------------------C---------CCGGGSB
T ss_pred chHHHHHHHHHHHHHHHHHHhhhcCEEEEEEECCcccccch---h---hh-----------ccc---------ccccccC
Confidence 57999999999888754 4579999999984333211 0 00 000 0111256
Q ss_pred eHHHHHHHHHHHHHHhccCCCCCcEEE
Q 010075 304 PVDMVVNAMIVAMVAHAKQPSDANIYH 330 (519)
Q Consensus 304 pVDdva~aii~a~~~~~~~~~~~~iyn 330 (519)
..+|+|++++.++.... ..-.+++++
T Consensus 216 ~pedvA~~v~~l~s~~~-~~itG~~i~ 241 (274)
T 3e03_A 216 RPEIMADAAHAVLTREA-AGFHGQFLI 241 (274)
T ss_dssp CTHHHHHHHHHHHTSCC-TTCCSCEEE
T ss_pred CHHHHHHHHHHHhCccc-cccCCeEEE
Confidence 78999999999886332 222356663
|
| >2z5l_A Tylkr1, tylactone synthase starter module and modules 1 & 2; short-chain dehydrogenase/reductase, rossman fold; 1.95A {Streptomyces fradiae} | Back alignment and structure |
|---|
Probab=99.66 E-value=3.8e-15 Score=159.44 Aligned_cols=204 Identities=15% Similarity=0.177 Sum_probs=144.4
Q ss_pred hcCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceE
Q 010075 9 FLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKIT 88 (519)
Q Consensus 9 ~~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~ 88 (519)
+-.+++||||||||+||.++++.|++.|. .+|+++.|+.......+++.+++ .+ ...++.
T Consensus 256 ~~~~~~vLITGgtGgIG~~lA~~La~~G~--~~vvl~~R~~~~~~~~~~l~~~l---------~~---------~g~~v~ 315 (511)
T 2z5l_A 256 WQPSGTVLITGGMGAIGRRLARRLAAEGA--ERLVLTSRRGPEAPGAAELAEEL---------RG---------HGCEVV 315 (511)
T ss_dssp CCCCSEEEEETTTSHHHHHHHHHHHHTTC--SEEEEEESSGGGSTTHHHHHHHH---------HT---------TTCEEE
T ss_pred cCCCCEEEEECCCCHHHHHHHHHHHhCCC--cEEEEEecCCcccHHHHHHHHHH---------Hh---------cCCEEE
Confidence 45689999999999999999999999873 36888999764332223322111 11 125789
Q ss_pred EEeccCCCCCCCCChhhhHHHHhc--CccEEEEcCccCCcc-------ccHHHHHHHhHHHHHHHHHHHHhccCCceEEE
Q 010075 89 FVPGDISSEDLGLKDSNLKEELWN--ELDIMVNSAAITKFD-------ERYDVAFGINTLGVIHLVNFAKKCVKLKVFVH 159 (519)
Q Consensus 89 ~v~gDl~~~~lgls~~~~~~~l~~--~vdiViH~Aa~v~f~-------~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V~ 159 (519)
++.+|+++ .+..+.+++ .+|+|||+||..... +.++..+++|+.|+.++.+++..++++++||+
T Consensus 316 ~~~~Dvtd-------~~~v~~~~~~~~ld~VVh~AGv~~~~~~~~~~~~~~~~~~~~nv~g~~~L~~~~~~~~~~~~~V~ 388 (511)
T 2z5l_A 316 HAACDVAE-------RDALAALVTAYPPNAVFHTAGILDDAVIDTLSPESFETVRGAKVCGAELLHQLTADIKGLDAFVL 388 (511)
T ss_dssp EEECCSSC-------HHHHHHHHHHSCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHHHHHHHHHHHTSSCTTCCCEEE
T ss_pred EEEeCCCC-------HHHHHHHHhcCCCcEEEECCcccCCcccccCCHHHHHHHHHHHHHHHHHHHHHHhhccCCCEEEE
Confidence 99999995 343445554 499999999986532 45777899999999999999876546789999
Q ss_pred Eeccee-ecCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcHHHHHHHHH
Q 010075 160 VSTAYV-AGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMG 238 (519)
Q Consensus 160 vSTa~v-~~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~Y~~sK~~a 238 (519)
+||... ++. .....|+.+|+..
T Consensus 389 ~SS~a~~~g~---------------------------------------------------------~g~~~YaaaKa~l 411 (511)
T 2z5l_A 389 FSSVTGTWGN---------------------------------------------------------AGQGAYAAANAAL 411 (511)
T ss_dssp EEEGGGTTCC---------------------------------------------------------TTBHHHHHHHHHH
T ss_pred EeCHHhcCCC---------------------------------------------------------CCCHHHHHHHHHH
Confidence 999743 321 1235799999999
Q ss_pred HHHHHHh-hcCCcEEEEecCccccCCCCCCCcccccccccHHHHHHhhcCCceeeccCCCceeeeeeHHHHHHHHHHHHH
Q 010075 239 EMLMQQS-KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMIVAMV 317 (519)
Q Consensus 239 E~lv~~~-~~~lp~~IvRPs~V~g~~~~p~~gw~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~d~vpVDdva~aii~a~~ 317 (519)
|.+.+.. ..++++++++||.+..+.. .... ....+. . .-...++.+++++++..++.
T Consensus 412 d~la~~~~~~gi~v~sv~pG~~~~tgm------~~~~--~~~~~~--~------------~g~~~l~~e~~a~~l~~al~ 469 (511)
T 2z5l_A 412 DALAERRRAAGLPATSVAWGLWGGGGM------AAGA--GEESLS--R------------RGLRAMDPDAAVDALLGAMG 469 (511)
T ss_dssp HHHHHHHHTTTCCCEEEEECCBCSTTC------CCCH--HHHHHH--H------------HTBCCBCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCcEEEEECCcccCCcc------cccc--cHHHHH--h------------cCCCCCCHHHHHHHHHHHHh
Confidence 9999876 5689999999998732211 1110 000010 0 11245889999999999987
Q ss_pred H
Q 010075 318 A 318 (519)
Q Consensus 318 ~ 318 (519)
.
T Consensus 470 ~ 470 (511)
T 2z5l_A 470 R 470 (511)
T ss_dssp H
T ss_pred C
Confidence 4
|
| >3asu_A Short-chain dehydrogenase/reductase SDR; SDR family, rossmann-fold, short-chain dehydrogenase/reducta ALLO-threonine dehydrogenase; 1.90A {Escherichia coli} PDB: 3asv_A* | Back alignment and structure |
|---|
Probab=99.66 E-value=1.6e-15 Score=147.46 Aligned_cols=212 Identities=14% Similarity=0.144 Sum_probs=138.2
Q ss_pred CEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEEec
Q 010075 13 KTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVPG 92 (519)
Q Consensus 13 k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v~g 92 (519)
|+++||||+|+||+++++.|++.| .+|+++.|+... .+.+. ++. ..++.++.+
T Consensus 1 k~vlVTGas~gIG~aia~~l~~~G---~~V~~~~r~~~~---~~~~~-------------~~~--------~~~~~~~~~ 53 (248)
T 3asu_A 1 MIVLVTGATAGFGECITRRFIQQG---HKVIATGRRQER---LQELK-------------DEL--------GDNLYIAQL 53 (248)
T ss_dssp CEEEETTTTSTTHHHHHHHHHHTT---CEEEEEESCHHH---HHHHH-------------HHH--------CTTEEEEEC
T ss_pred CEEEEECCCChHHHHHHHHHHHCC---CEEEEEeCCHHH---HHHHH-------------HHh--------cCceEEEEc
Confidence 689999999999999999999998 678888886321 12221 111 246889999
Q ss_pred cCCCCCCCCChhhhHHHHhc-------CccEEEEcCccCC----c----cccHHHHHHHhHHHHHHHHHHHHhc---cCC
Q 010075 93 DISSEDLGLKDSNLKEELWN-------ELDIMVNSAAITK----F----DERYDVAFGINTLGVIHLVNFAKKC---VKL 154 (519)
Q Consensus 93 Dl~~~~lgls~~~~~~~l~~-------~vdiViH~Aa~v~----f----~~~~~~~~~~Nv~gt~~ll~~a~~~---~~l 154 (519)
|+++ .+..+.+++ ++|++||+||... + .+.++..+++|+.|+.++++.+... .+.
T Consensus 54 Dv~~-------~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~ 126 (248)
T 3asu_A 54 DVRN-------RAAIEEMLASLPAEWCNIDILVNNAGLALGMEPAHKASVEDWETMIDTNNKGLVYMTRAVLPGMVERNH 126 (248)
T ss_dssp CTTC-------HHHHHHHHHTSCTTTCCCCEEEECCCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTC
T ss_pred CCCC-------HHHHHHHHHHHHHhCCCCCEEEECCCcCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCC
Confidence 9995 333334433 6999999999752 1 2467888999999999998887531 256
Q ss_pred ceEEEEecceeecCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcHHHHH
Q 010075 155 KVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFT 234 (519)
Q Consensus 155 ~~~V~vSTa~v~~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~Y~~s 234 (519)
.++|++||....... .....|+.|
T Consensus 127 g~iv~isS~~~~~~~--------------------------------------------------------~~~~~Y~as 150 (248)
T 3asu_A 127 GHIINIGSTAGSWPY--------------------------------------------------------AGGNVYGAT 150 (248)
T ss_dssp CEEEEECCGGGTSCC--------------------------------------------------------TTCHHHHHH
T ss_pred ceEEEEccchhccCC--------------------------------------------------------CCCchHHHH
Confidence 799999998654211 123579999
Q ss_pred HHHHHHHHHHh-----hcCCcEEEEecCcccc-CCCCCCCcccccccccHHHHHHhhcCCceeeccCCCceeeeeeHHHH
Q 010075 235 KTMGEMLMQQS-----KENLSLVIIRPTVVSG-TYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMV 308 (519)
Q Consensus 235 K~~aE~lv~~~-----~~~lp~~IvRPs~V~g-~~~~p~~gw~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~d~vpVDdv 308 (519)
|+..+.+.+.. ..++.+..++||.|.| +..... + ........ .... ....+..+|+
T Consensus 151 Kaa~~~~~~~la~e~~~~gi~v~~v~PG~v~gT~~~~~~--~----~~~~~~~~--------~~~~----~~~~~~p~dv 212 (248)
T 3asu_A 151 KAFVRQFSLNLRTDLHGTAVRVTDIEPGLVGGTEFSNVR--F----KGDDGKAE--------KTYQ----NTVALTPEDV 212 (248)
T ss_dssp HHHHHHHHHHHHHHTTTSCCEEEEEEECSBCC----------------------------------------CCBCHHHH
T ss_pred HHHHHHHHHHHHHHhhhcCcEEEEEeccccccCcchhhc--c----cCchHHHH--------HHHh----ccCCCCHHHH
Confidence 99999988764 3479999999999984 322100 0 00000000 0000 0123589999
Q ss_pred HHHHHHHHHHhccCCCCCcEEEecCC
Q 010075 309 VNAMIVAMVAHAKQPSDANIYHVGSS 334 (519)
Q Consensus 309 a~aii~a~~~~~~~~~~~~iyni~s~ 334 (519)
|++++.++.... .-.+....+..+
T Consensus 213 A~~v~~l~s~~~--~~~g~~i~v~~~ 236 (248)
T 3asu_A 213 SEAVWWVSTLPA--HVNINTLEMMPV 236 (248)
T ss_dssp HHHHHHHHHSCT--TCCCCEEEECCT
T ss_pred HHHHHHHhcCCc--cceeeEEEEccc
Confidence 999999887422 223455665443
|
| >1jtv_A 17 beta-hydroxysteroid dehydrogenase type 1; steroid hormones, alternative binding mode, oxidoreductase; HET: TES; 1.54A {Homo sapiens} SCOP: c.2.1.2 PDB: 1dht_A* 1equ_A* 1bhs_A* 1i5r_A* 1qyv_A* 1qyw_A* 1qyx_A* 3dey_X* 3dhe_A* 3hb4_X* 3hb5_X* 3klp_X* 3km0_A* 1iol_A* 1fds_A* 1fdt_A* 3klm_X* 1fdw_A* 1fdu_A* 1fdv_A* ... | Back alignment and structure |
|---|
Probab=99.64 E-value=2.2e-15 Score=152.68 Aligned_cols=173 Identities=10% Similarity=0.091 Sum_probs=120.6
Q ss_pred CCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEE
Q 010075 11 ENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFV 90 (519)
Q Consensus 11 ~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v 90 (519)
++|+|+||||||+||++++++|++.|. +|+++.|.........+..+.. ... .....++.++
T Consensus 1 ~~k~vlVTGas~GIG~ala~~L~~~G~---~v~~v~r~~~~~~~~~~~~~~~---------~~~------~~~~~~~~~~ 62 (327)
T 1jtv_A 1 ARTVVLITGCSSGIGLHLAVRLASDPS---QSFKVYATLRDLKTQGRLWEAA---------RAL------ACPPGSLETL 62 (327)
T ss_dssp CCEEEEESCCSSHHHHHHHHHHHTCTT---CCEEEEEEESCGGGTHHHHHHH---------HHT------TCCTTSEEEE
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCC---ceEEEEeecCcHHHHHHHHHHh---------hhc------cCCCCceEEE
Confidence 478999999999999999999999984 5577777644322211111000 000 0012578899
Q ss_pred eccCCCCCCCCChhhhHHHHhc-----CccEEEEcCccCCc-------cccHHHHHHHhHHHHHHHHHHHHh-c--cCCc
Q 010075 91 PGDISSEDLGLKDSNLKEELWN-----ELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKK-C--VKLK 155 (519)
Q Consensus 91 ~gDl~~~~lgls~~~~~~~l~~-----~vdiViH~Aa~v~f-------~~~~~~~~~~Nv~gt~~ll~~a~~-~--~~l~ 155 (519)
.+|+++ .+..+.+++ ++|++||+||.... .+.++..+++|+.|+.++++.+.. + .+..
T Consensus 63 ~~Dv~d-------~~~v~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g 135 (327)
T 1jtv_A 63 QLDVRD-------SKSVAAARERVTEGRVDVLVCNAGLGLLGPLEALGEDAVASVLDVNVVGTVRMLQAFLPDMKRRGSG 135 (327)
T ss_dssp ECCTTC-------HHHHHHHHHTCTTSCCSEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCE
T ss_pred EecCCC-------HHHHHHHHHHHhcCCCCEEEECCCcCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCC
Confidence 999995 333345554 49999999997532 245788899999999999988632 1 2568
Q ss_pred eEEEEecceeecCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcHHHHHH
Q 010075 156 VFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTK 235 (519)
Q Consensus 156 ~~V~vSTa~v~~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~Y~~sK 235 (519)
++|++||...+... .....|+.||
T Consensus 136 ~IV~isS~~~~~~~--------------------------------------------------------~~~~~Y~aSK 159 (327)
T 1jtv_A 136 RVLVTGSVGGLMGL--------------------------------------------------------PFNDVYCASK 159 (327)
T ss_dssp EEEEEEEGGGTSCC--------------------------------------------------------TTCHHHHHHH
T ss_pred EEEEECCcccccCC--------------------------------------------------------CCChHHHHHH
Confidence 99999998654211 1235799999
Q ss_pred HHHHHHHHHh-----hcCCcEEEEecCccccCCC
Q 010075 236 TMGEMLMQQS-----KENLSLVIIRPTVVSGTYK 264 (519)
Q Consensus 236 ~~aE~lv~~~-----~~~lp~~IvRPs~V~g~~~ 264 (519)
+..|.+.+.. ..++.+++++||.|.++..
T Consensus 160 ~a~~~~~~~la~el~~~gI~v~~v~PG~v~T~~~ 193 (327)
T 1jtv_A 160 FALEGLCESLAVLLLPFGVHLSLIECGPVHTAFM 193 (327)
T ss_dssp HHHHHHHHHHHHHHGGGTEEEEEEEECCBCC---
T ss_pred HHHHHHHHHHHHHhhhcCcEEEEEEeCcccChHH
Confidence 9999988765 3589999999999987653
|
| >4gkb_A 3-oxoacyl-[acyl-carrier protein] reductase; putative sugar dehydrogenase, enzyme function initiative, EF structural genomics; 1.50A {Burkholderia multivorans} PDB: 4glo_A* | Back alignment and structure |
|---|
Probab=99.64 E-value=1.1e-14 Score=142.21 Aligned_cols=233 Identities=12% Similarity=0.197 Sum_probs=149.9
Q ss_pred cCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 010075 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (519)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (519)
++||+++||||++.||+++++.|++.| .+|++..|+.......+.+. +. ..++.+
T Consensus 5 L~gKvalVTGas~GIG~aia~~la~~G---a~Vv~~~r~~~~~~~~~~~~-------------~~---------~~~~~~ 59 (258)
T 4gkb_A 5 LQDKVVIVTGGASGIGGAISMRLAEER---AIPVVFARHAPDGAFLDALA-------------QR---------QPRATY 59 (258)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTT---CEEEEEESSCCCHHHHHHHH-------------HH---------CTTCEE
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHcC---CEEEEEECCcccHHHHHHHH-------------hc---------CCCEEE
Confidence 789999999999999999999999999 68899999876533222221 11 257889
Q ss_pred EeccCCCCCCCCChhhhHHHHhcCccEEEEcCccCCc------cccHHHHHHHhHHHHHHHHHHHHhc--cCCceEEEEe
Q 010075 90 VPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF------DERYDVAFGINTLGVIHLVNFAKKC--VKLKVFVHVS 161 (519)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~~~vdiViH~Aa~v~f------~~~~~~~~~~Nv~gt~~ll~~a~~~--~~l~~~V~vS 161 (519)
+.+|+++++-.-...+...+.+.++|++||+||.... .+.++..+++|+.|+..+.+.+... ++-.++|++|
T Consensus 60 ~~~Dv~~~~~v~~~v~~~~~~~G~iDiLVNnAGi~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~G~IVnis 139 (258)
T 4gkb_A 60 LPVELQDDAQCRDAVAQTIATFGRLDGLVNNAGVNDGIGLDAGRDAFVASLERNLIHYYAMAHYCVPHLKATRGAIVNIS 139 (258)
T ss_dssp EECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEC
T ss_pred EEeecCCHHHHHHHHHHHHHHhCCCCEEEECCCCCCCCCccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCeEEEEe
Confidence 9999996321000000111223479999999997432 3568888999999999888877532 1226899999
Q ss_pred cceeecCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcHHHHHHHHHHHH
Q 010075 162 TAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEML 241 (519)
Q Consensus 162 Ta~v~~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~Y~~sK~~aE~l 241 (519)
|....... +....|+.||+..+.+
T Consensus 140 S~~~~~~~--------------------------------------------------------~~~~~Y~asKaav~~l 163 (258)
T 4gkb_A 140 SKTAVTGQ--------------------------------------------------------GNTSGYCASKGAQLAL 163 (258)
T ss_dssp CTHHHHCC--------------------------------------------------------SSCHHHHHHHHHHHHH
T ss_pred ehhhccCC--------------------------------------------------------CCchHHHHHHHHHHHH
Confidence 97653211 1235799999988888
Q ss_pred HHHh-----hcCCcEEEEecCccccCCCCCCCcccccccccHHHHHHhhcCCceeeccCCCceeeeeeHHHHHHHHHHHH
Q 010075 242 MQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMIVAM 316 (519)
Q Consensus 242 v~~~-----~~~lp~~IvRPs~V~g~~~~p~~gw~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~d~vpVDdva~aii~a~ 316 (519)
.+.. ..++.+..|-||.|-.+..+. |..................+ .+ .-+...+|+|++++.++
T Consensus 164 tr~lA~ela~~gIrVN~V~PG~i~T~~~~~---~~~~~~~~~~~~~~~~~~~p---lg-----~R~g~peeiA~~v~fLa 232 (258)
T 4gkb_A 164 TREWAVALREHGVRVNAVIPAEVMTPLYRN---WIATFEDPEAKLAEIAAKVP---LG-----RRFTTPDEIADTAVFLL 232 (258)
T ss_dssp HHHHHHHHGGGTCEEEEEEECSBCCSCC--------------CHHHHHHTTCT---TT-----TSCBCHHHHHHHHHHHH
T ss_pred HHHHHHHhcccCeEEEEEecCCCCChhHhh---hhhcccChHHHHHHHHhcCC---CC-----CCCcCHHHHHHHHHHHh
Confidence 7754 568999999999997764321 11111111111222211111 00 12455789999999988
Q ss_pred HHhccCCCCCcEEEecCCC
Q 010075 317 VAHAKQPSDANIYHVGSSL 335 (519)
Q Consensus 317 ~~~~~~~~~~~iyni~s~~ 335 (519)
.... .--.++++++.+|-
T Consensus 233 S~~a-~~iTG~~i~VDGG~ 250 (258)
T 4gkb_A 233 SPRA-SHTTGEWLFVDGGY 250 (258)
T ss_dssp SGGG-TTCCSCEEEESTTT
T ss_pred Cchh-cCccCCeEEECCCc
Confidence 6433 22247889998874
|
| >2nwq_A Probable short-chain dehydrogenase; oxidoreductase; 2.30A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=99.64 E-value=3.4e-15 Score=147.24 Aligned_cols=167 Identities=12% Similarity=0.119 Sum_probs=117.2
Q ss_pred hhcCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCce
Q 010075 8 EFLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKI 87 (519)
Q Consensus 8 ~~~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v 87 (519)
..++ |+++||||+|+||++++++|++.| .+|+++.|+... .+.+.+++ .. ..++
T Consensus 18 ~~~~-k~vlVTGas~gIG~aia~~La~~G---~~V~~~~r~~~~---~~~~~~~~-------------~~------~~~~ 71 (272)
T 2nwq_A 18 SHMS-STLFITGATSGFGEACARRFAEAG---WSLVLTGRREER---LQALAGEL-------------SA------KTRV 71 (272)
T ss_dssp ---C-CEEEESSTTTSSHHHHHHHHHHTT---CEEEEEESCHHH---HHHHHHHH-------------TT------TSCE
T ss_pred CCcC-cEEEEeCCCCHHHHHHHHHHHHCC---CEEEEEECCHHH---HHHHHHHh-------------hc------CCcE
Confidence 4456 899999999999999999999998 678999886321 12221111 00 1368
Q ss_pred EEEeccCCCCCCCCChhhhHHHHhc-------CccEEEEcCccCCc--------cccHHHHHHHhHHHHHHHHHHHHhc-
Q 010075 88 TFVPGDISSEDLGLKDSNLKEELWN-------ELDIMVNSAAITKF--------DERYDVAFGINTLGVIHLVNFAKKC- 151 (519)
Q Consensus 88 ~~v~gDl~~~~lgls~~~~~~~l~~-------~vdiViH~Aa~v~f--------~~~~~~~~~~Nv~gt~~ll~~a~~~- 151 (519)
.++.+|+++ .+..+.+++ ++|++||+||.... .+.++..+++|+.|+..+.+.+...
T Consensus 72 ~~~~~Dv~d-------~~~v~~~~~~~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m 144 (272)
T 2nwq_A 72 LPLTLDVRD-------RAAMSAAVDNLPEEFATLRGLINNAGLALGTDPAQSCDLDDWDTMVDTNIKGLLYSTRLLLPRL 144 (272)
T ss_dssp EEEECCTTC-------HHHHHHHHHTCCGGGSSCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHH
T ss_pred EEEEcCCCC-------HHHHHHHHHHHHHHhCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 899999995 333334443 47999999997532 2567888999999988877766421
Q ss_pred --cCCc-eEEEEecceeecCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCC
Q 010075 152 --VKLK-VFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWP 228 (519)
Q Consensus 152 --~~l~-~~V~vSTa~v~~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~ 228 (519)
.+.. ++|++||...+... ...
T Consensus 145 ~~~~~g~~IV~isS~~~~~~~--------------------------------------------------------~~~ 168 (272)
T 2nwq_A 145 IAHGAGASIVNLGSVAGKWPY--------------------------------------------------------PGS 168 (272)
T ss_dssp HHHCTTCEEEEECCGGGTSCC--------------------------------------------------------TTC
T ss_pred HhcCCCcEEEEeCCchhccCC--------------------------------------------------------CCC
Confidence 2456 99999997654211 123
Q ss_pred cHHHHHHHHHHHHHHHh-----hcCCcEEEEecCccccCC
Q 010075 229 NTYVFTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTY 263 (519)
Q Consensus 229 n~Y~~sK~~aE~lv~~~-----~~~lp~~IvRPs~V~g~~ 263 (519)
..|+.||+..+.+.+.. ..++++.+++||.|.++.
T Consensus 169 ~~Y~asKaa~~~l~~~la~el~~~gIrvn~v~PG~v~T~~ 208 (272)
T 2nwq_A 169 HVYGGTKAFVEQFSLNLRCDLQGTGVRVTNLEPGLCESEF 208 (272)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCTTSCCEEEEEEECSBC---
T ss_pred chHHHHHHHHHHHHHHHHHHhCccCeEEEEEEcCCCcCcc
Confidence 57999999999998765 347999999999998764
|
| >4b79_A PA4098, probable short-chain dehydrogenase; oxidoreductase, infectious disease, structure-based inhibito; HET: NAD; 1.98A {Pseudomonas aeruginosa PAO1} | Back alignment and structure |
|---|
Probab=99.64 E-value=1.9e-14 Score=138.74 Aligned_cols=218 Identities=13% Similarity=0.093 Sum_probs=149.2
Q ss_pred hhhcCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCc
Q 010075 7 VEFLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEK 86 (519)
Q Consensus 7 ~~~~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~ 86 (519)
.+.|+||+++||||++.||+++++.|++.| .+|++..|+..... .....+
T Consensus 6 ~dlf~GK~alVTGas~GIG~aia~~la~~G---a~Vv~~~~~~~~~~---------------------------~~~~~~ 55 (242)
T 4b79_A 6 HDIYAGQQVLVTGGSSGIGAAIAMQFAELG---AEVVALGLDADGVH---------------------------APRHPR 55 (242)
T ss_dssp TTTTTTCEEEEETTTSHHHHHHHHHHHHTT---CEEEEEESSTTSTT---------------------------SCCCTT
T ss_pred CCCCCCCEEEEeCCCCHHHHHHHHHHHHCC---CEEEEEeCCHHHHh---------------------------hhhcCC
Confidence 366899999999999999999999999999 68899998764321 111367
Q ss_pred eEEEeccCCCCCCCCChhhhHHHHh---cCccEEEEcCccCCc-----cccHHHHHHHhHHHHHHHHHHHHhc--cCCce
Q 010075 87 ITFVPGDISSEDLGLKDSNLKEELW---NELDIMVNSAAITKF-----DERYDVAFGINTLGVIHLVNFAKKC--VKLKV 156 (519)
Q Consensus 87 v~~v~gDl~~~~lgls~~~~~~~l~---~~vdiViH~Aa~v~f-----~~~~~~~~~~Nv~gt~~ll~~a~~~--~~l~~ 156 (519)
+..+.+|++++ +..+++. .++|++||+||.... .+.++..+++|+.|+..+.+.+..+ ++-.+
T Consensus 56 ~~~~~~Dv~~~-------~~v~~~~~~~g~iDiLVNNAGi~~~~~~~~~~~w~~~~~vNl~g~~~~~~~~~p~m~~~~G~ 128 (242)
T 4b79_A 56 IRREELDITDS-------QRLQRLFEALPRLDVLVNNAGISRDREEYDLATFERVLRLNLSAAMLASQLARPLLAQRGGS 128 (242)
T ss_dssp EEEEECCTTCH-------HHHHHHHHHCSCCSEEEECCCCCCGGGGGSHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCEE
T ss_pred eEEEEecCCCH-------HHHHHHHHhcCCCCEEEECCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCe
Confidence 89999999963 3233443 579999999997642 2568889999999999888877543 12368
Q ss_pred EEEEecceeecCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcHHHHHHH
Q 010075 157 FVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKT 236 (519)
Q Consensus 157 ~V~vSTa~v~~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~Y~~sK~ 236 (519)
+|++||....... .....|+.||+
T Consensus 129 IVnisS~~~~~~~--------------------------------------------------------~~~~~Y~asKa 152 (242)
T 4b79_A 129 ILNIASMYSTFGS--------------------------------------------------------ADRPAYSASKG 152 (242)
T ss_dssp EEEECCGGGTSCC--------------------------------------------------------SSCHHHHHHHH
T ss_pred EEEEeeccccCCC--------------------------------------------------------CCCHHHHHHHH
Confidence 9999997543211 12347999999
Q ss_pred HHHHHHHHh-----hcCCcEEEEecCccccCCCCCCCcccccccccHHHHHHhhcCCceeeccCCCceeeeeeHHHHHHH
Q 010075 237 MGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNA 311 (519)
Q Consensus 237 ~aE~lv~~~-----~~~lp~~IvRPs~V~g~~~~p~~gw~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~d~vpVDdva~a 311 (519)
....+.+.. ..++++..|-||.|-.+..+.... .......+.... | ..-+...+|+|++
T Consensus 153 av~~ltr~lA~Ela~~gIrVNaV~PG~i~T~m~~~~~~-------~~~~~~~~~~~~----P-----lgR~g~peeiA~~ 216 (242)
T 4b79_A 153 AIVQLTRSLACEYAAERIRVNAIAPGWIDTPLGAGLKA-------DVEATRRIMQRT----P-----LARWGEAPEVASA 216 (242)
T ss_dssp HHHHHHHHHHHHHGGGTEEEEEEEECSBCCC-----CC-------CHHHHHHHHHTC----T-----TCSCBCHHHHHHH
T ss_pred HHHHHHHHHHHHhhhcCeEEEEEEeCCCCChhhhcccC-------CHHHHHHHHhcC----C-----CCCCcCHHHHHHH
Confidence 888887654 568999999999997764322111 111122222111 1 1123557899999
Q ss_pred HHHHHHHhccCCCCCcEEEecCC
Q 010075 312 MIVAMVAHAKQPSDANIYHVGSS 334 (519)
Q Consensus 312 ii~a~~~~~~~~~~~~iyni~s~ 334 (519)
++.++.... .--.++++.+.+|
T Consensus 217 v~fLaSd~a-~~iTG~~l~VDGG 238 (242)
T 4b79_A 217 AAFLCGPGA-SFVTGAVLAVDGG 238 (242)
T ss_dssp HHHHTSGGG-TTCCSCEEEESTT
T ss_pred HHHHhCchh-cCccCceEEECcc
Confidence 998886433 2224678888766
|
| >1zmt_A Haloalcohol dehalogenase HHEC; halohydrin dehalogenase, epoxide catalysis, enantioselectivity, lyase; HET: RNO; 1.70A {Agrobacterium tumefaciens} SCOP: c.2.1.2 PDB: 1pwz_A 1px0_A* 1pwx_A* 1zo8_A* | Back alignment and structure |
|---|
Probab=99.63 E-value=1.9e-15 Score=147.42 Aligned_cols=224 Identities=13% Similarity=0.111 Sum_probs=140.5
Q ss_pred CEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEEec
Q 010075 13 KTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVPG 92 (519)
Q Consensus 13 k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v~g 92 (519)
|+|+||||||+||+++++.|++.| .+|+++.|+..... .+.+ ++.. ..++..+
T Consensus 2 k~vlVTGas~gIG~~ia~~l~~~G---~~V~~~~r~~~~~~---~~~~----------l~~~---------~~~~~~~-- 54 (254)
T 1zmt_A 2 STAIVTNVKHFGGMGSALRLSEAG---HTVACHDESFKQKD---ELEA----------FAET---------YPQLKPM-- 54 (254)
T ss_dssp CEEEESSTTSTTHHHHHHHHHHTT---CEEEECCGGGGSHH---HHHH----------HHHH---------CTTSEEC--
T ss_pred eEEEEeCCCchHHHHHHHHHHHCC---CEEEEEeCCHHHHH---HHHH----------HHhc---------CCcEEEE--
Confidence 689999999999999999999998 67889888754321 1110 1111 1233333
Q ss_pred cCCCCCCCCChhhhHHH---HhcCccEEEEcCccC-Cc-------cccHHHHHHHhHHHHHHHHHHHHhc---cCCceEE
Q 010075 93 DISSEDLGLKDSNLKEE---LWNELDIMVNSAAIT-KF-------DERYDVAFGINTLGVIHLVNFAKKC---VKLKVFV 158 (519)
Q Consensus 93 Dl~~~~lgls~~~~~~~---l~~~vdiViH~Aa~v-~f-------~~~~~~~~~~Nv~gt~~ll~~a~~~---~~l~~~V 158 (519)
|..+ -....+. ...++|++||+||.. .. .+.++..+++|+.|+.++++.+... .+..++|
T Consensus 55 d~~~------v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv 128 (254)
T 1zmt_A 55 SEQE------PAELIEAVTSAYGQVDVLVSNDIFAPEFQPIDKYAVEDYRGAVEALQIRPFALVNAVASQMKKRKSGHII 128 (254)
T ss_dssp CCCS------HHHHHHHHHHHHSCCCEEEEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEE
T ss_pred CHHH------HHHHHHHHHHHhCCCCEEEECCCcCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEE
Confidence 3331 1222222 234799999999976 31 2457888999999999998887531 2457999
Q ss_pred EEecceeecCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcHHHHHHHHH
Q 010075 159 HVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMG 238 (519)
Q Consensus 159 ~vSTa~v~~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~Y~~sK~~a 238 (519)
++||...+... .....|+.||+..
T Consensus 129 ~isS~~~~~~~--------------------------------------------------------~~~~~Y~~sK~a~ 152 (254)
T 1zmt_A 129 FITSATPFGPW--------------------------------------------------------KELSTYTSARAGA 152 (254)
T ss_dssp EECCSTTTSCC--------------------------------------------------------TTCHHHHHHHHHH
T ss_pred EECCcccccCC--------------------------------------------------------CCchHHHHHHHHH
Confidence 99997654211 1235799999999
Q ss_pred HHHHHHh-----hcCCcEEEEecCccccCCCCCCCcccccccccHHHHHHhhcCCceeeccCCCceeeeeeHHHHHHHHH
Q 010075 239 EMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMI 313 (519)
Q Consensus 239 E~lv~~~-----~~~lp~~IvRPs~V~g~~~~p~~gw~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~d~vpVDdva~aii 313 (519)
+.+.+.. ..++.+.+++||.|+|+....+. ..+............... . ....+...+|+|++++
T Consensus 153 ~~~~~~la~e~~~~gi~v~~v~PG~v~~~~~~~~~-~T~~~~~~~~~~~~~~~~----~-----p~~~~~~p~dvA~~v~ 222 (254)
T 1zmt_A 153 CTLANALSKELGEYNIPVFAIGPNYLHSEDSPYFY-PTEPWKTNPEHVAHVKKV----T-----ALQRLGTQKELGELVA 222 (254)
T ss_dssp HHHHHHHHHHHGGGTCCEEEEEESSBCCBTCCSSC-BHHHHTTCHHHHHHHHHH----S-----SSSSCBCHHHHHHHHH
T ss_pred HHHHHHHHHHhhhcCcEEEEEecCccccccccccC-CCcccccChHHHHHHhcc----C-----CCCCCcCHHHHHHHHH
Confidence 9888765 34899999999999876532110 000000001111111100 0 1123578999999999
Q ss_pred HHHHHhccCCCCCcEEEecCCCC
Q 010075 314 VAMVAHAKQPSDANIYHVGSSLR 336 (519)
Q Consensus 314 ~a~~~~~~~~~~~~iyni~s~~~ 336 (519)
.++..... .-.++++++.+|..
T Consensus 223 ~l~s~~~~-~~tG~~~~vdgG~~ 244 (254)
T 1zmt_A 223 FLASGSCD-YLTGQVFWLAGGFP 244 (254)
T ss_dssp HHHTTSCG-GGTTCEEEESTTCC
T ss_pred HHhCcccC-CccCCEEEECCCch
Confidence 88863221 12368899988744
|
| >3u0b_A Oxidoreductase, short chain dehydrogenase/reducta protein; structural genomics, ssgcid; 1.70A {Mycobacterium smegmatis} PDB: 3lls_A 3v1t_C 3v1u_A* 4fw8_A* 3q6i_A* 3m1l_A | Back alignment and structure |
|---|
Probab=99.62 E-value=1.1e-14 Score=153.85 Aligned_cols=219 Identities=16% Similarity=0.125 Sum_probs=143.8
Q ss_pred hhcCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCce
Q 010075 8 EFLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKI 87 (519)
Q Consensus 8 ~~~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v 87 (519)
..++||+++||||+|+||+++++.|++.| .+|+++.|+...... +++. ++ .++
T Consensus 209 ~~l~gk~~LVTGgsgGIG~aiA~~La~~G---a~Vvl~~r~~~~~~l-~~~~-------------~~----------~~~ 261 (454)
T 3u0b_A 209 KPLDGKVAVVTGAARGIGATIAEVFARDG---ATVVAIDVDGAAEDL-KRVA-------------DK----------VGG 261 (454)
T ss_dssp STTTTCEEEESSCSSHHHHHHHHHHHHTT---CEEEEEECGGGHHHH-HHHH-------------HH----------HTC
T ss_pred cCCCCCEEEEeCCchHHHHHHHHHHHHCC---CEEEEEeCCccHHHH-HHHH-------------HH----------cCC
Confidence 34689999999999999999999999998 578888886432211 1111 11 235
Q ss_pred EEEeccCCCCCCCCChhhhHHHHh-------c-CccEEEEcCccCCc-------cccHHHHHHHhHHHHHHHHHHHHhc-
Q 010075 88 TFVPGDISSEDLGLKDSNLKEELW-------N-ELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKC- 151 (519)
Q Consensus 88 ~~v~gDl~~~~lgls~~~~~~~l~-------~-~vdiViH~Aa~v~f-------~~~~~~~~~~Nv~gt~~ll~~a~~~- 151 (519)
.++.+|+++++ ..+.++ . .+|+|||+||.... .+.++..+++|+.|+.++.+.+...
T Consensus 262 ~~~~~Dvtd~~-------~v~~~~~~~~~~~g~~id~lV~nAGv~~~~~~~~~~~~~~~~~~~~nv~g~~~l~~~~~~~~ 334 (454)
T 3u0b_A 262 TALTLDVTADD-------AVDKITAHVTEHHGGKVDILVNNAGITRDKLLANMDEKRWDAVIAVNLLAPQRLTEGLVGNG 334 (454)
T ss_dssp EEEECCTTSTT-------HHHHHHHHHHHHSTTCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHTT
T ss_pred eEEEEecCCHH-------HHHHHHHHHHHHcCCCceEEEECCcccCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 68999999643 222222 2 49999999998642 2567888999999999999998763
Q ss_pred --cCCceEEEEecceeecCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCc
Q 010075 152 --VKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPN 229 (519)
Q Consensus 152 --~~l~~~V~vSTa~v~~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n 229 (519)
.+..+||++||....... ....
T Consensus 335 ~~~~~g~iV~iSS~a~~~g~--------------------------------------------------------~g~~ 358 (454)
T 3u0b_A 335 TIGEGGRVIGLSSMAGIAGN--------------------------------------------------------RGQT 358 (454)
T ss_dssp SSCTTCEEEEECCHHHHHCC--------------------------------------------------------TTCH
T ss_pred hhcCCCEEEEEeChHhCCCC--------------------------------------------------------CCCH
Confidence 246799999997643211 1235
Q ss_pred HHHHHHHHHHHHHHH----h-hcCCcEEEEecCccccCCCCCCCcccccccccHHHHHHhhcCCceeeccCCCceeeeee
Q 010075 230 TYVFTKTMGEMLMQQ----S-KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIP 304 (519)
Q Consensus 230 ~Y~~sK~~aE~lv~~----~-~~~lp~~IvRPs~V~g~~~~p~~gw~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~d~vp 304 (519)
.|+.||+..+.+.+. + ..++++..+.||.|.++.....+.... ...... .....+..
T Consensus 359 ~YaasKaal~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~------~~~~~~------------~~l~r~g~ 420 (454)
T 3u0b_A 359 NYATTKAGMIGLAEALAPVLADKGITINAVAPGFIETKMTEAIPLATR------EVGRRL------------NSLFQGGQ 420 (454)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECSBCC----------C------HHHHHS------------BTTSSCBC
T ss_pred HHHHHHHHHHHHHHHHHHHhhhcCcEEEEEEcCcccChhhhhcchhhH------HHHHhh------------ccccCCCC
Confidence 799999966666554 3 458999999999997765432211100 000000 01112356
Q ss_pred HHHHHHHHHHHHHHhccCCCCCcEEEecCCC
Q 010075 305 VDMVVNAMIVAMVAHAKQPSDANIYHVGSSL 335 (519)
Q Consensus 305 VDdva~aii~a~~~~~~~~~~~~iyni~s~~ 335 (519)
.+|+|+++..++.... ..-.++++++.+|.
T Consensus 421 pedvA~~v~fL~s~~a-~~itG~~i~vdGG~ 450 (454)
T 3u0b_A 421 PVDVAELIAYFASPAS-NAVTGNTIRVCGQA 450 (454)
T ss_dssp HHHHHHHHHHHHCGGG-TTCCSCEEEESSSB
T ss_pred HHHHHHHHHHHhCCcc-CCCCCcEEEECCcc
Confidence 7899999998886432 22347899998763
|
| >1oaa_A Sepiapterin reductase; tetrahydrobiopterin, oxidoreductase; HET: NAP; 1.25A {Mus musculus} SCOP: c.2.1.2 PDB: 1nas_A* 1sep_A* 1z6z_A* | Back alignment and structure |
|---|
Probab=99.61 E-value=1.6e-14 Score=141.14 Aligned_cols=226 Identities=12% Similarity=0.109 Sum_probs=140.5
Q ss_pred cCCCEEEEeCCccHHHHHHHHHHHH---hCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCc
Q 010075 10 LENKTILVSGVTGFVAKVFIEKILR---VQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEK 86 (519)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lv~~LL~---~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~ 86 (519)
+++|+++||||+|+||++++++|++ .| .+|+++.|+... .+.+. +.+++..+ ..+
T Consensus 4 l~~k~~lVTGas~gIG~~ia~~l~~~~~~G---~~V~~~~r~~~~---~~~~~---------~~l~~~~~-------~~~ 61 (259)
T 1oaa_A 4 LGCAVCVLTGASRGFGRALAPQLARLLSPG---SVMLVSARSESM---LRQLK---------EELGAQQP-------DLK 61 (259)
T ss_dssp CBSEEEEESSCSSHHHHHHHHHHHTTBCTT---CEEEEEESCHHH---HHHHH---------HHHHHHCT-------TSE
T ss_pred CCCcEEEEeCCCChHHHHHHHHHHHhhcCC---CeEEEEeCCHHH---HHHHH---------HHHHhhCC-------CCe
Confidence 5789999999999999999999998 77 688999886421 12222 11222111 246
Q ss_pred eEEEeccCCCCCCCCChhhhHHHHhc-----Ccc--EEEEcCccCC-----c-----cccHHHHHHHhHHHHHHHHHHHH
Q 010075 87 ITFVPGDISSEDLGLKDSNLKEELWN-----ELD--IMVNSAAITK-----F-----DERYDVAFGINTLGVIHLVNFAK 149 (519)
Q Consensus 87 v~~v~gDl~~~~lgls~~~~~~~l~~-----~vd--iViH~Aa~v~-----f-----~~~~~~~~~~Nv~gt~~ll~~a~ 149 (519)
+.++.+|+++++. -....+.+.+ ++| ++||+||... + .+.++..+++|+.|+.++++.+.
T Consensus 62 ~~~~~~Dv~~~~~---v~~~~~~~~~~~~~g~~d~~~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~ 138 (259)
T 1oaa_A 62 VVLAAADLGTEAG---VQRLLSAVRELPRPEGLQRLLLINNAATLGDVSKGFLNVNDLAEVNNYWALNLTSMLCLTSGTL 138 (259)
T ss_dssp EEEEECCTTSHHH---HHHHHHHHHHSCCCTTCCEEEEEECCCCCCCCSSCGGGCCCHHHHHHHHHHHTHHHHHHHHHHH
T ss_pred EEEEecCCCCHHH---HHHHHHHHHhccccccCCccEEEECCcccCCCCcchhccCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8899999996320 0111112222 468 9999999742 1 24577889999999999999886
Q ss_pred hc-c----CCceEEEEecceeecCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhcccccccc
Q 010075 150 KC-V----KLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKL 224 (519)
Q Consensus 150 ~~-~----~l~~~V~vSTa~v~~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~ 224 (519)
.. . +..++|++||...+...
T Consensus 139 ~~~~~~~~~~g~iv~isS~~~~~~~------------------------------------------------------- 163 (259)
T 1oaa_A 139 NAFQDSPGLSKTVVNISSLCALQPY------------------------------------------------------- 163 (259)
T ss_dssp HTSCCCTTCEEEEEEECCGGGTSCC-------------------------------------------------------
T ss_pred HHHhhccCCCceEEEEcCchhcCCC-------------------------------------------------------
Confidence 53 1 23579999998654211
Q ss_pred CCCCcHHHHHHHHHHHHHHHh---hcCCcEEEEecCccccCCCCCCCcccccccccHHHHHHhhcCCceeeccCCCceee
Q 010075 225 HGWPNTYVFTKTMGEMLMQQS---KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMD 301 (519)
Q Consensus 225 ~~~~n~Y~~sK~~aE~lv~~~---~~~lp~~IvRPs~V~g~~~~p~~gw~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~d 301 (519)
.....|+.||+..+.+.+.. ..++.+..+.||.|-.+.... +..... .......... .. ....
T Consensus 164 -~~~~~Y~asKaa~~~~~~~la~e~~~i~vn~v~PG~v~T~~~~~---~~~~~~-~~~~~~~~~~----~~-----p~~~ 229 (259)
T 1oaa_A 164 -KGWGLYCAGKAARDMLYQVLAAEEPSVRVLSYAPGPLDNDMQQL---ARETSK-DPELRSKLQK----LK-----SDGA 229 (259)
T ss_dssp -TTCHHHHHHHHHHHHHHHHHHHHCTTEEEEEEECCSBSSHHHHH---HHHHCS-CHHHHHHHHH----HH-----HTTC
T ss_pred -CCccHHHHHHHHHHHHHHHHHhhCCCceEEEecCCCcCcchHHH---HhhccC-ChhHHHHHHH----hh-----hcCC
Confidence 22357999999999998865 224888999998875432100 000000 0000000000 00 1123
Q ss_pred eeeHHHHHHHHHHHHHHhccCCCCCcEEEe
Q 010075 302 VIPVDMVVNAMIVAMVAHAKQPSDANIYHV 331 (519)
Q Consensus 302 ~vpVDdva~aii~a~~~~~~~~~~~~iyni 331 (519)
+...+|+|++++.++.. . ..-.++++++
T Consensus 230 ~~~p~dvA~~v~~l~~~-~-~~itG~~i~v 257 (259)
T 1oaa_A 230 LVDCGTSAQKLLGLLQK-D-TFQSGAHVDF 257 (259)
T ss_dssp SBCHHHHHHHHHHHHHH-C-CSCTTEEEET
T ss_pred cCCHHHHHHHHHHHHhh-c-cccCCcEEec
Confidence 57899999999998863 2 2123455554
|
| >1gz6_A Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MFE-2, beta-oxidation, peroxisome, SDR, steroid biosynthesis, oxidoreductase, NADP; HET: NAI; 2.38A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1zbq_A* | Back alignment and structure |
|---|
Probab=99.60 E-value=5.9e-15 Score=148.92 Aligned_cols=211 Identities=16% Similarity=0.194 Sum_probs=136.3
Q ss_pred cCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecC------CcccHHHHHHHHHhhhhhHHHHHhhhcccccccc
Q 010075 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAA------DIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFI 83 (519)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~------~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~ 83 (519)
++||+|+||||+|+||+++++.|++.| .+|++..|.. +.....+.+.++ ++...
T Consensus 7 l~gk~~lVTGas~GIG~~~a~~La~~G---a~Vv~~~~~~~~~~~~R~~~~~~~~~~~---------l~~~~-------- 66 (319)
T 1gz6_A 7 FDGRVVLVTGAGGGLGRAYALAFAERG---ALVVVNDLGGDFKGVGKGSSAADKVVEE---------IRRRG-------- 66 (319)
T ss_dssp CTTCEEEETTTTSHHHHHHHHHHHHTT---CEEEEECCCBCTTSCBCCSHHHHHHHHH---------HHHTT--------
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCC---CEEEEEcCCcccccccCCHHHHHHHHHH---------HHhhC--------
Confidence 679999999999999999999999998 6778875531 112222222211 11110
Q ss_pred CCceEEEeccCCCCCCCCChhhhHH---HHhcCccEEEEcCccCCc-------cccHHHHHHHhHHHHHHHHHHHHhc--
Q 010075 84 SEKITFVPGDISSEDLGLKDSNLKE---ELWNELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKC-- 151 (519)
Q Consensus 84 ~~~v~~v~gDl~~~~lgls~~~~~~---~l~~~vdiViH~Aa~v~f-------~~~~~~~~~~Nv~gt~~ll~~a~~~-- 151 (519)
. .+.+|+++... .....+ ....++|++||+||.... .+.++..+++|+.|+.++++++...
T Consensus 67 -~---~~~~D~~~~~~---~~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~ 139 (319)
T 1gz6_A 67 -G---KAVANYDSVEA---GEKLVKTALDTFGRIDVVVNNAGILRDRSFSRISDEDWDIIQRVHLRGSFQVTRAAWDHMK 139 (319)
T ss_dssp -C---EEEEECCCGGG---HHHHHHHHHHHTSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred -C---eEEEeCCCHHH---HHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHH
Confidence 1 12478886421 011111 123479999999997542 2467888999999999988887431
Q ss_pred -cCCceEEEEeccee-ecCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCc
Q 010075 152 -VKLKVFVHVSTAYV-AGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPN 229 (519)
Q Consensus 152 -~~l~~~V~vSTa~v-~~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n 229 (519)
.+..++|++||... ++. ....
T Consensus 140 ~~~~grIV~vsS~~~~~~~---------------------------------------------------------~~~~ 162 (319)
T 1gz6_A 140 KQNYGRIIMTASASGIYGN---------------------------------------------------------FGQA 162 (319)
T ss_dssp HHTCEEEEEECCHHHHHCC---------------------------------------------------------TTCH
T ss_pred HcCCCEEEEECChhhccCC---------------------------------------------------------CCCH
Confidence 25679999999643 221 1235
Q ss_pred HHHHHHHHHHHHHHHh-----hcCCcEEEEecCccccCCCCCCCcccccccccHHHHHHhhcCCceeeccCCCceeeeee
Q 010075 230 TYVFTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIP 304 (519)
Q Consensus 230 ~Y~~sK~~aE~lv~~~-----~~~lp~~IvRPs~V~g~~~~p~~gw~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~d~vp 304 (519)
.|+.||+..+.+.+.. ..++.+.+++||.+ .+.. ... .+. ...+++.
T Consensus 163 ~Y~aSK~a~~~~~~~la~el~~~gI~vn~v~PG~~-t~~~-------~~~-~~~-------------------~~~~~~~ 214 (319)
T 1gz6_A 163 NYSAAKLGLLGLANTLVIEGRKNNIHCNTIAPNAG-SRMT-------ETV-MPE-------------------DLVEALK 214 (319)
T ss_dssp HHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEEECC-STTT-------GGG-SCH-------------------HHHHHSC
T ss_pred HHHHHHHHHHHHHHHHHHHhcccCEEEEEEeCCCc-cccc-------ccc-CCh-------------------hhhccCC
Confidence 7999999999888765 35799999999987 2211 000 000 0112357
Q ss_pred HHHHHHHHHHHHHHhccCCCCCcEEEecCC
Q 010075 305 VDMVVNAMIVAMVAHAKQPSDANIYHVGSS 334 (519)
Q Consensus 305 VDdva~aii~a~~~~~~~~~~~~iyni~s~ 334 (519)
.+++|.+++.++... ....+++|++.+|
T Consensus 215 p~dvA~~~~~l~s~~--~~~tG~~~~v~GG 242 (319)
T 1gz6_A 215 PEYVAPLVLWLCHES--CEENGGLFEVGAG 242 (319)
T ss_dssp GGGTHHHHHHHTSTT--CCCCSCEEEEETT
T ss_pred HHHHHHHHHHHhCch--hhcCCCEEEECCC
Confidence 889999998887532 1224788998877
|
| >2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain, structura genomics consortium, SGC, oxidoreductase; 1.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.60 E-value=1.2e-14 Score=142.20 Aligned_cols=170 Identities=17% Similarity=0.198 Sum_probs=118.9
Q ss_pred cCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 010075 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (519)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (519)
++||+++||||+|+||+++++.|++.| .+|+++.|+... .+.+.++ ++.. ..++.+
T Consensus 3 l~~k~vlVTGas~gIG~~ia~~l~~~G---~~V~~~~r~~~~---~~~~~~~---------~~~~---------~~~~~~ 58 (260)
T 2qq5_A 3 MNGQVCVVTGASRGIGRGIALQLCKAG---ATVYITGRHLDT---LRVVAQE---------AQSL---------GGQCVP 58 (260)
T ss_dssp TTTCEEEESSTTSHHHHHHHHHHHHTT---CEEEEEESCHHH---HHHHHHH---------HHHH---------SSEEEE
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCC---CEEEEEeCCHHH---HHHHHHH---------HHHc---------CCceEE
Confidence 578999999999999999999999998 678888886321 1222111 1111 256889
Q ss_pred EeccCCCCCCCCChhhhHHHH----hcCccEEEEcCc--cC--------Cc----cccHHHHHHHhHHHHHHHHHHHHh-
Q 010075 90 VPGDISSEDLGLKDSNLKEEL----WNELDIMVNSAA--IT--------KF----DERYDVAFGINTLGVIHLVNFAKK- 150 (519)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l----~~~vdiViH~Aa--~v--------~f----~~~~~~~~~~Nv~gt~~ll~~a~~- 150 (519)
+.+|+++++. -....+.+ ..++|++||+|| .. .+ .+.++..+++|+.|+..+.+.+.+
T Consensus 59 ~~~Dv~~~~~---v~~~~~~~~~~~~g~id~lvnnAg~g~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~ 135 (260)
T 2qq5_A 59 VVCDSSQESE---VRSLFEQVDREQQGRLDVLVNNAYAGVQTILNTRNKAFWETPASMWDDINNVGLRGHYFCSVYGARL 135 (260)
T ss_dssp EECCTTSHHH---HHHHHHHHHHHHTTCCCEEEECCCTTHHHHHHTTTCCTTTSCTTHHHHHHTTTTHHHHHHHHHHHHH
T ss_pred EECCCCCHHH---HHHHHHHHHHhcCCCceEEEECCccccccccccCCCccccCCHHHHHHHHhhcchhHHHHHHHHHHH
Confidence 9999996321 01111122 346899999994 21 11 245778899999999887776642
Q ss_pred c--cCCceEEEEecceeecCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCC
Q 010075 151 C--VKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWP 228 (519)
Q Consensus 151 ~--~~l~~~V~vSTa~v~~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~ 228 (519)
+ .+..++|++||...+.. .+.
T Consensus 136 ~~~~~~g~iv~isS~~~~~~---------------------------------------------------------~~~ 158 (260)
T 2qq5_A 136 MVPAGQGLIVVISSPGSLQY---------------------------------------------------------MFN 158 (260)
T ss_dssp HGGGTCCEEEEECCGGGTSC---------------------------------------------------------CSS
T ss_pred HhhcCCcEEEEEcChhhcCC---------------------------------------------------------CCC
Confidence 1 24579999999754321 123
Q ss_pred cHHHHHHHHHHHHHHHh-----hcCCcEEEEecCccccCC
Q 010075 229 NTYVFTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTY 263 (519)
Q Consensus 229 n~Y~~sK~~aE~lv~~~-----~~~lp~~IvRPs~V~g~~ 263 (519)
..|+.||+..+.+.+.. ..++++.+++||.|.++.
T Consensus 159 ~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~ 198 (260)
T 2qq5_A 159 VPYGVGKAACDKLAADCAHELRRHGVSCVSLWPGIVQTEL 198 (260)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEECCCSCTTT
T ss_pred CchHHHHHHHHHHHHHHHHHhccCCeEEEEEecCccccHH
Confidence 57999999999998765 358999999999997764
|
| >2h7i_A Enoyl-[acyl-carrier-protein] reductase [NADH]; oxidoreductase, INHA, enoyl acyl carrier reductase, pyrrolid carboxamide; HET: NAD 566; 1.62A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1p44_A* 1p45_A* 2b35_A* 2b36_A* 2b37_A* 2aq8_A* 2h7l_A* 2h7m_A* 2h7n_A* 2h7p_A* 2nsd_A* 2pr2_A* 2x22_A* 2x23_A* 3fne_A* 3fnf_A* 3fng_A* 3fnh_A* 3oew_A* 2aqh_A* ... | Back alignment and structure |
|---|
Probab=99.60 E-value=5.9e-15 Score=145.10 Aligned_cols=227 Identities=15% Similarity=0.060 Sum_probs=145.2
Q ss_pred hcCCCEEEEeCC--ccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCc
Q 010075 9 FLENKTILVSGV--TGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEK 86 (519)
Q Consensus 9 ~~~~k~VlITGa--TGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~ 86 (519)
.++||+|+|||| +|+||+++++.|++.| .+|+++.|+... ..+.+. ++ ...+
T Consensus 4 ~l~~k~vlVTGa~~s~gIG~aia~~l~~~G---~~V~~~~r~~~~--~~~~~~-------------~~--------~~~~ 57 (269)
T 2h7i_A 4 LLDGKRILVSGIITDSSIAFHIARVAQEQG---AQLVLTGFDRLR--LIQRIT-------------DR--------LPAK 57 (269)
T ss_dssp TTTTCEEEECCCSSTTSHHHHHHHHHHHTT---CEEEEEECSCHH--HHHHHH-------------TT--------SSSC
T ss_pred ccCCCEEEEECCCCCCchHHHHHHHHHHCC---CEEEEEecChHH--HHHHHH-------------Hh--------cCCC
Confidence 367899999999 9999999999999998 678888887521 111111 11 1246
Q ss_pred eEEEeccCCCCCCCCChhhhHHHHhc----------CccEEEEcCccCC--------c----cccHHHHHHHhHHHHHHH
Q 010075 87 ITFVPGDISSEDLGLKDSNLKEELWN----------ELDIMVNSAAITK--------F----DERYDVAFGINTLGVIHL 144 (519)
Q Consensus 87 v~~v~gDl~~~~lgls~~~~~~~l~~----------~vdiViH~Aa~v~--------f----~~~~~~~~~~Nv~gt~~l 144 (519)
+.++.+|++++ +..+.+++ ++|++||+||... + .+.++..+++|+.|+..+
T Consensus 58 ~~~~~~Dv~~~-------~~v~~~~~~~~~~~g~~~~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l 130 (269)
T 2h7i_A 58 APLLELDVQNE-------EHLASLAGRVTEAIGAGNKLDGVVHSIGFMPQTGMGINPFFDAPYADVSKGIHISAYSYASM 130 (269)
T ss_dssp CCEEECCTTCH-------HHHHHHHHHHHHHHCTTCCEEEEEECCCCCCGGGSTTSCGGGCCHHHHHHHHHHHTHHHHHH
T ss_pred ceEEEccCCCH-------HHHHHHHHHHHHHhCCCCCceEEEECCccCccccccccccccCCHHHHHHHHHHhhHHHHHH
Confidence 78899999963 22233333 8999999999754 1 245778899999999999
Q ss_pred HHHHHhc-cCCceEEEEecceeecCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccc
Q 010075 145 VNFAKKC-VKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAK 223 (519)
Q Consensus 145 l~~a~~~-~~l~~~V~vSTa~v~~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~ 223 (519)
++.+.+. ..-.++|++||...++.
T Consensus 131 ~~~~~~~~~~~g~iv~iss~~~~~~------------------------------------------------------- 155 (269)
T 2h7i_A 131 AKALLPIMNPGGSIVGMDFDPSRAM------------------------------------------------------- 155 (269)
T ss_dssp HHHHGGGEEEEEEEEEEECCCSSCC-------------------------------------------------------
T ss_pred HHHHHHhhccCCeEEEEcCcccccc-------------------------------------------------------
Confidence 9998753 22258999998643211
Q ss_pred cCCCCcHHHHHHHHHHHHHHHh-----hcCCcEEEEecCccccCCCCCC-Cccc-cccc-ccHHHHHHhhcCCceeeccC
Q 010075 224 LHGWPNTYVFTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPF-PGWV-EDLK-TINTLFVASAQGNLRCLVGE 295 (519)
Q Consensus 224 ~~~~~n~Y~~sK~~aE~lv~~~-----~~~lp~~IvRPs~V~g~~~~p~-~gw~-~~~~-~~~~~i~~~~~g~~~~~~~~ 295 (519)
.....|+.||+..+.+.+.. ..++.+..++||.|..+..... .+.. +... ............ .+.
T Consensus 156 --~~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~p~- 228 (269)
T 2h7i_A 156 --PAYNWMTVAKSALESVNRFVAREAGKYGVRSNLVAAGPIRTLAMSAIVGGALGEEAGAQIQLLEEGWDQR----API- 228 (269)
T ss_dssp --TTTHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCHHHHHHHTTTTCHHHHHHHHHHHHHHHHH----CTT-
T ss_pred --CchHHHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCcccchhhhccccccchhhHHHHHHHHHHhhhcc----CCc-
Confidence 12357999999999888764 3489999999998865421100 0000 0000 000000111000 010
Q ss_pred CCceeeeeeHHHHHHHHHHHHHHhccCCCCCcEEEecCC
Q 010075 296 TKVIMDVIPVDMVVNAMIVAMVAHAKQPSDANIYHVGSS 334 (519)
Q Consensus 296 ~~~~~d~vpVDdva~aii~a~~~~~~~~~~~~iyni~s~ 334 (519)
. +.+...+|+|++++.++... ...-.++++++.+|
T Consensus 229 --~-rr~~~p~dvA~~v~~L~s~~-~~~itG~~i~vdGG 263 (269)
T 2h7i_A 229 --G-WNMKDATPVAKTVCALLSDW-LPATTGDIIYADGG 263 (269)
T ss_dssp --C-CCTTCCHHHHHHHHHHHSSS-CTTCCSEEEEESTT
T ss_pred --c-cCCCCHHHHHHHHHHHhCch-hccCcceEEEecCC
Confidence 0 02456789999999988532 22224688888776
|
| >4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius} | Back alignment and structure |
|---|
Probab=99.59 E-value=3.6e-14 Score=138.04 Aligned_cols=223 Identities=15% Similarity=0.118 Sum_probs=146.9
Q ss_pred cCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 010075 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (519)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (519)
++||+++||||++.||+++++.|++.| .+|++..|+.. ..+.+.++ +++. ..++.+
T Consensus 5 L~gKvalVTGas~GIG~aiA~~la~~G---a~Vv~~~~~~~---~~~~~~~~---------i~~~---------g~~~~~ 60 (254)
T 4fn4_A 5 LKNKVVIVTGAGSGIGRAIAKKFALND---SIVVAVELLED---RLNQIVQE---------LRGM---------GKEVLG 60 (254)
T ss_dssp GTTCEEEEETTTSHHHHHHHHHHHHTT---CEEEEEESCHH---HHHHHHHH---------HHHT---------TCCEEE
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHcC---CEEEEEECCHH---HHHHHHHH---------HHhc---------CCcEEE
Confidence 689999999999999999999999999 67888888642 22222211 1111 357889
Q ss_pred EeccCCCCCCCCChhhhHHHH-------hcCccEEEEcCccCC----c----cccHHHHHHHhHHHHHHHHHHHHh-c--
Q 010075 90 VPGDISSEDLGLKDSNLKEEL-------WNELDIMVNSAAITK----F----DERYDVAFGINTLGVIHLVNFAKK-C-- 151 (519)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l-------~~~vdiViH~Aa~v~----f----~~~~~~~~~~Nv~gt~~ll~~a~~-~-- 151 (519)
+.+|++++ +..+.+ +.++|++||+||... + .+.++..+++|+.|+..+.+.+.+ |
T Consensus 61 ~~~Dvt~~-------~~v~~~~~~~~~~~G~iDiLVNNAGi~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~ 133 (254)
T 4fn4_A 61 VKADVSKK-------KDVEEFVRRTFETYSRIDVLCNNAGIMDGVTPVAEVSDELWERVLAVNLYSAFYSSRAVIPIMLK 133 (254)
T ss_dssp EECCTTSH-------HHHHHHHHHHHHHHSCCCEEEECCCCCCTTCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHH
T ss_pred EEccCCCH-------HHHHHHHHHHHHHcCCCCEEEECCcccCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHH
Confidence 99999963 222233 347999999999642 2 256889999999999988887654 2
Q ss_pred cCCceEEEEecceeecCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcHH
Q 010075 152 VKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTY 231 (519)
Q Consensus 152 ~~l~~~V~vSTa~v~~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~Y 231 (519)
++-.++|++||....... .....|
T Consensus 134 ~~~G~IVnisS~~g~~~~--------------------------------------------------------~~~~~Y 157 (254)
T 4fn4_A 134 QGKGVIVNTASIAGIRGG--------------------------------------------------------FAGAPY 157 (254)
T ss_dssp HTCEEEEEECCGGGTCSS--------------------------------------------------------SSCHHH
T ss_pred cCCcEEEEEechhhcCCC--------------------------------------------------------CCChHH
Confidence 245789999997543211 123469
Q ss_pred HHHHHHHHHHHHHh-----hcCCcEEEEecCccccCCCCCCCcccccccccHHHHHHhhcCCceeeccCCCceeeeeeHH
Q 010075 232 VFTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVD 306 (519)
Q Consensus 232 ~~sK~~aE~lv~~~-----~~~lp~~IvRPs~V~g~~~~p~~gw~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~d~vpVD 306 (519)
+.||+....+.+.. ..++.+..|-||.|-.+..... . .............. +. ..-+...+
T Consensus 158 ~asKaal~~ltr~lA~ela~~gIrVN~V~PG~i~T~~~~~~---~---~~~~~~~~~~~~~~----~~----~~R~g~pe 223 (254)
T 4fn4_A 158 TVAKHGLIGLTRSIAAHYGDQGIRAVAVLPGTVKTNIGLGS---S---KPSELGMRTLTKLM----SL----SSRLAEPE 223 (254)
T ss_dssp HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSSCTTSC---S---SCCHHHHHHHHHHH----TT----CCCCBCHH
T ss_pred HHHHHHHHHHHHHHHHHhhhhCeEEEEEEeCCCCCcccccc---c---CCcHHHHHHHHhcC----CC----CCCCcCHH
Confidence 99999888777654 5689999999999876532111 0 00000011111000 00 01134578
Q ss_pred HHHHHHHHHHHHhccCCCCCcEEEecCC
Q 010075 307 MVVNAMIVAMVAHAKQPSDANIYHVGSS 334 (519)
Q Consensus 307 dva~aii~a~~~~~~~~~~~~iyni~s~ 334 (519)
|+|++++.++.... .--.++++.+.+|
T Consensus 224 diA~~v~fLaSd~a-~~iTG~~i~VDGG 250 (254)
T 4fn4_A 224 DIANVIVFLASDEA-SFVNGDAVVVDGG 250 (254)
T ss_dssp HHHHHHHHHHSGGG-TTCCSCEEEESTT
T ss_pred HHHHHHHHHhCchh-cCCcCCEEEeCCC
Confidence 99999999886433 2224788888776
|
| >4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli} | Back alignment and structure |
|---|
Probab=99.59 E-value=1.9e-14 Score=141.42 Aligned_cols=227 Identities=15% Similarity=0.111 Sum_probs=147.6
Q ss_pred hhhhcCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCC
Q 010075 6 VVEFLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISE 85 (519)
Q Consensus 6 i~~~~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~ 85 (519)
|.+-++||+++||||++.||+++++.|++.| .+|++..|+.. ++++ +.++. ..
T Consensus 23 Ms~rL~gKvalVTGas~GIG~aiA~~la~~G---a~V~i~~r~~~------~l~~----------~~~~~--------g~ 75 (273)
T 4fgs_A 23 MTQRLNAKIAVITGATSGIGLAAAKRFVAEG---ARVFITGRRKD------VLDA----------AIAEI--------GG 75 (273)
T ss_dssp --CTTTTCEEEEESCSSHHHHHHHHHHHHTT---CEEEEEESCHH------HHHH----------HHHHH--------CT
T ss_pred hcchhCCCEEEEeCcCCHHHHHHHHHHHHCC---CEEEEEECCHH------HHHH----------HHHHc--------CC
Confidence 4455889999999999999999999999999 68888888642 2221 11121 35
Q ss_pred ceEEEeccCCCCCCCCChhhhHHHH-------hcCccEEEEcCccCCc-------cccHHHHHHHhHHHHHHHHHHHHh-
Q 010075 86 KITFVPGDISSEDLGLKDSNLKEEL-------WNELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKK- 150 (519)
Q Consensus 86 ~v~~v~gDl~~~~lgls~~~~~~~l-------~~~vdiViH~Aa~v~f-------~~~~~~~~~~Nv~gt~~ll~~a~~- 150 (519)
++..+.+|++++ +..+.+ ..++|++||+||.... .+.++..+++|+.|+..+.+.+..
T Consensus 76 ~~~~~~~Dv~~~-------~~v~~~~~~~~~~~G~iDiLVNNAG~~~~~~~~~~~~e~w~~~~~vNl~g~~~~~~~~~p~ 148 (273)
T 4fgs_A 76 GAVGIQADSANL-------AELDRLYEKVKAEAGRIDVLFVNAGGGSMLPLGEVTEEQYDDTFDRNVKGVLFTVQKALPL 148 (273)
T ss_dssp TCEEEECCTTCH-------HHHHHHHHHHHHHHSCEEEEEECCCCCCCCCTTSCCHHHHHHHHHHHTHHHHHHHHHHTTT
T ss_pred CeEEEEecCCCH-------HHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhccHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence 678899999963 222233 3479999999997542 267899999999999999998864
Q ss_pred ccCCceEEEEecceeecCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcH
Q 010075 151 CVKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNT 230 (519)
Q Consensus 151 ~~~l~~~V~vSTa~v~~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~ 230 (519)
+++-.++|.+||....... +....
T Consensus 149 m~~~G~IInisS~~~~~~~--------------------------------------------------------~~~~~ 172 (273)
T 4fgs_A 149 LARGSSVVLTGSTAGSTGT--------------------------------------------------------PAFSV 172 (273)
T ss_dssp EEEEEEEEEECCGGGGSCC--------------------------------------------------------TTCHH
T ss_pred HhhCCeEEEEeehhhccCC--------------------------------------------------------CCchH
Confidence 3344589999887543211 12347
Q ss_pred HHHHHHHHHHHHHHh-----hcCCcEEEEecCccccCCCCCCCcccccccccHHHHHHhhcCCceeeccCCCceeeeeeH
Q 010075 231 YVFTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPV 305 (519)
Q Consensus 231 Y~~sK~~aE~lv~~~-----~~~lp~~IvRPs~V~g~~~~p~~gw~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~d~vpV 305 (519)
|+.||+....+.+.. ..++.+..|-||.|-.+......+ ........+...+.... |. .-+.-.
T Consensus 173 Y~asKaav~~ltr~lA~Ela~~gIrVN~V~PG~i~T~~~~~~~~--~~~~~~~~~~~~~~~~~----Pl-----gR~g~p 241 (273)
T 4fgs_A 173 YAASKAALRSFARNWILDLKDRGIRINTLSPGPTETTGLVELAG--KDPVQQQGLLNALAAQV----PM-----GRVGRA 241 (273)
T ss_dssp HHHHHHHHHHHHHHHHHHTTTSCEEEEEEEECSBCC-----------CHHHHHHHHHHHHHHS----TT-----SSCBCH
T ss_pred HHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCCCCChhHHHhhc--cCchhhHHHHHHHHhcC----CC-----CCCcCH
Confidence 999999988887754 557999999999987654321110 00000111222221111 11 113457
Q ss_pred HHHHHHHHHHHHHhccCCCCCcEEEecCC
Q 010075 306 DMVVNAMIVAMVAHAKQPSDANIYHVGSS 334 (519)
Q Consensus 306 Ddva~aii~a~~~~~~~~~~~~iyni~s~ 334 (519)
+|+|++++.++..... --.++++.+.+|
T Consensus 242 eeiA~~v~FLaSd~a~-~iTG~~i~VDGG 269 (273)
T 4fgs_A 242 EEVAAAALFLASDDSS-FVTGAELFVDGG 269 (273)
T ss_dssp HHHHHHHHHHHSGGGT-TCCSCEEEESTT
T ss_pred HHHHHHHHHHhCchhc-CccCCeEeECcC
Confidence 8999999998864332 224678888776
|
| >4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp} | Back alignment and structure |
|---|
Probab=99.59 E-value=2.6e-14 Score=139.16 Aligned_cols=221 Identities=16% Similarity=0.088 Sum_probs=146.6
Q ss_pred cCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 010075 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (519)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (519)
++||+++||||++.||+++++.|++.| .+|++..|+.. ..++..++ +++. ..++..
T Consensus 7 L~gKvalVTGas~GIG~aia~~la~~G---a~Vvi~~~~~~---~~~~~~~~---------l~~~---------g~~~~~ 62 (255)
T 4g81_D 7 LTGKTALVTGSARGLGFAYAEGLAAAG---ARVILNDIRAT---LLAESVDT---------LTRK---------GYDAHG 62 (255)
T ss_dssp CTTCEEEETTCSSHHHHHHHHHHHHTT---CEEEECCSCHH---HHHHHHHH---------HHHT---------TCCEEE
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCC---CEEEEEECCHH---HHHHHHHH---------HHhc---------CCcEEE
Confidence 689999999999999999999999999 67888877532 12222211 1111 257889
Q ss_pred EeccCCCCCCCCChhhhHHHH-------hcCccEEEEcCccCCc-------cccHHHHHHHhHHHHHHHHHHHHh-c---
Q 010075 90 VPGDISSEDLGLKDSNLKEEL-------WNELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKK-C--- 151 (519)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l-------~~~vdiViH~Aa~v~f-------~~~~~~~~~~Nv~gt~~ll~~a~~-~--- 151 (519)
+.+|++++ +..+.+ ..++|++||+||.... .+.++..+++|+.|+..+.+.+.+ +
T Consensus 63 ~~~Dv~~~-------~~v~~~~~~~~~~~G~iDiLVNNAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~ 135 (255)
T 4g81_D 63 VAFDVTDE-------LAIEAAFSKLDAEGIHVDILINNAGIQYRKPMVELELENWQKVIDTNLTSAFLVSRSAAKRMIAR 135 (255)
T ss_dssp CCCCTTCH-------HHHHHHHHHHHHTTCCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH
T ss_pred EEeeCCCH-------HHHHHHHHHHHHHCCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc
Confidence 99999963 222232 2469999999997643 267899999999999998877643 2
Q ss_pred cCCceEEEEecceeecCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcHH
Q 010075 152 VKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTY 231 (519)
Q Consensus 152 ~~l~~~V~vSTa~v~~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~Y 231 (519)
++-.++|++||....... +....|
T Consensus 136 ~~~G~IVnisS~~~~~~~--------------------------------------------------------~~~~~Y 159 (255)
T 4g81_D 136 NSGGKIINIGSLTSQAAR--------------------------------------------------------PTVAPY 159 (255)
T ss_dssp TCCEEEEEECCGGGTSBC--------------------------------------------------------TTCHHH
T ss_pred cCCCEEEEEeehhhcCCC--------------------------------------------------------CCchhH
Confidence 244689999998654221 123469
Q ss_pred HHHHHHHHHHHHHh-----hcCCcEEEEecCccccCCCCCCCcccccccccHHHHHHhhcCCceeeccCCCceeeeeeHH
Q 010075 232 VFTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVD 306 (519)
Q Consensus 232 ~~sK~~aE~lv~~~-----~~~lp~~IvRPs~V~g~~~~p~~gw~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~d~vpVD 306 (519)
+.||+..+.+.+.. ..++.+..|-||.|..+..+.. .+ .......+.... |. .-+.-.+
T Consensus 160 ~asKaal~~ltr~lA~ela~~gIrVN~V~PG~i~T~~~~~~---~~----~~~~~~~~~~~~----Pl-----~R~g~pe 223 (255)
T 4g81_D 160 TAAKGGIKMLTCSMAAEWAQFNIQTNAIGPGYILTDMNTAL---IE----DKQFDSWVKSST----PS-----QRWGRPE 223 (255)
T ss_dssp HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCGGGHHH---HT----CHHHHHHHHHHS----TT-----CSCBCGG
T ss_pred HHHHHHHHHHHHHHHHHhcccCeEEEEEeeCCCCCchhhcc---cC----CHHHHHHHHhCC----CC-----CCCcCHH
Confidence 99999888877654 5689999999999876533110 00 011111111111 10 1134467
Q ss_pred HHHHHHHHHHHHhccCCCCCcEEEecCC
Q 010075 307 MVVNAMIVAMVAHAKQPSDANIYHVGSS 334 (519)
Q Consensus 307 dva~aii~a~~~~~~~~~~~~iyni~s~ 334 (519)
|+|++++.++.... .--.++++.+.+|
T Consensus 224 diA~~v~fL~S~~a-~~iTG~~i~VDGG 250 (255)
T 4g81_D 224 ELIGTAIFLSSKAS-DYINGQIIYVDGG 250 (255)
T ss_dssp GGHHHHHHHHSGGG-TTCCSCEEEESTT
T ss_pred HHHHHHHHHhCchh-CCCcCCEEEECCC
Confidence 89999998886432 2224678888776
|
| >3ged_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3geg_A* | Back alignment and structure |
|---|
Probab=99.57 E-value=6e-14 Score=135.92 Aligned_cols=208 Identities=13% Similarity=0.139 Sum_probs=142.0
Q ss_pred CCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEEe
Q 010075 12 NKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVP 91 (519)
Q Consensus 12 ~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v~ 91 (519)
+|+|+||||++.||+++++.|++.| .+|++..|+.. ++. + +.++ ..++..+.
T Consensus 2 nK~vlVTGas~GIG~aia~~la~~G---a~V~~~~~~~~------~~~-~---------~~~~---------~~~~~~~~ 53 (247)
T 3ged_A 2 NRGVIVTGGGHGIGKQICLDFLEAG---DKVCFIDIDEK------RSA-D---------FAKE---------RPNLFYFH 53 (247)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTT---CEEEEEESCHH------HHH-H---------HHTT---------CTTEEEEE
T ss_pred CCEEEEecCCCHHHHHHHHHHHHCC---CEEEEEeCCHH------HHH-H---------HHHh---------cCCEEEEE
Confidence 4899999999999999999999999 67888888631 221 1 1111 25678999
Q ss_pred ccCCCCCCCCChhhhHHHH-------hcCccEEEEcCccCCc-------cccHHHHHHHhHHHHHHHHHHHHhc--cCCc
Q 010075 92 GDISSEDLGLKDSNLKEEL-------WNELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKC--VKLK 155 (519)
Q Consensus 92 gDl~~~~lgls~~~~~~~l-------~~~vdiViH~Aa~v~f-------~~~~~~~~~~Nv~gt~~ll~~a~~~--~~l~ 155 (519)
+|++++ +..+.+ +.++|++||+||.... .+.++..+++|+.|+..+.+.+.+. ++-.
T Consensus 54 ~Dv~~~-------~~v~~~v~~~~~~~g~iDiLVNNAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~~~m~~~~G 126 (247)
T 3ged_A 54 GDVADP-------LTLKKFVEYAMEKLQRIDVLVNNACRGSKGILSSLLYEEFDYILSVGLKAPYELSRLCRDELIKNKG 126 (247)
T ss_dssp CCTTSH-------HHHHHHHHHHHHHHSCCCEEEECCCCCCCCGGGTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTC
T ss_pred ecCCCH-------HHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcCC
Confidence 999963 222232 3479999999997643 2678899999999999888877542 2336
Q ss_pred eEEEEecceeecCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcHHHHHH
Q 010075 156 VFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTK 235 (519)
Q Consensus 156 ~~V~vSTa~v~~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~Y~~sK 235 (519)
++|++||....... +....|+.||
T Consensus 127 ~IInisS~~~~~~~--------------------------------------------------------~~~~~Y~asK 150 (247)
T 3ged_A 127 RIINIASTRAFQSE--------------------------------------------------------PDSEAYASAK 150 (247)
T ss_dssp EEEEECCGGGTSCC--------------------------------------------------------TTCHHHHHHH
T ss_pred cEEEEeecccccCC--------------------------------------------------------CCCHHHHHHH
Confidence 89999997543211 1234699999
Q ss_pred HHHHHHHHHh----hcCCcEEEEecCccccCCCCCCCcccccccccHHHHHHhhcCCceeeccCCCceeeeeeHHHHHHH
Q 010075 236 TMGEMLMQQS----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNA 311 (519)
Q Consensus 236 ~~aE~lv~~~----~~~lp~~IvRPs~V~g~~~~p~~gw~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~d~vpVDdva~a 311 (519)
+..+.+.+.. .+++.+..|-||.|-.+..+.. ........ | ..-+...+|+|++
T Consensus 151 aal~~ltk~lA~ela~~IrVN~I~PG~i~t~~~~~~---------~~~~~~~~--------P-----l~R~g~pediA~~ 208 (247)
T 3ged_A 151 GGIVALTHALAMSLGPDVLVNCIAPGWINVTEQQEF---------TQEDCAAI--------P-----AGKVGTPKDISNM 208 (247)
T ss_dssp HHHHHHHHHHHHHHTTTSEEEEEEECSBCCCC---C---------CHHHHHTS--------T-----TSSCBCHHHHHHH
T ss_pred HHHHHHHHHHHHHHCCCCEEEEEecCcCCCCCcHHH---------HHHHHhcC--------C-----CCCCcCHHHHHHH
Confidence 9888777644 5689999999998865433211 11111111 1 1113457899999
Q ss_pred HHHHHHHhccCCCCCcEEEecCCC
Q 010075 312 MIVAMVAHAKQPSDANIYHVGSSL 335 (519)
Q Consensus 312 ii~a~~~~~~~~~~~~iyni~s~~ 335 (519)
++.++... --.++++.+.+|-
T Consensus 209 v~fL~s~~---~iTG~~i~VDGG~ 229 (247)
T 3ged_A 209 VLFLCQQD---FITGETIIVDGGM 229 (247)
T ss_dssp HHHHHHCS---SCCSCEEEESTTG
T ss_pred HHHHHhCC---CCCCCeEEECcCH
Confidence 99988532 2247889998873
|
| >1zmo_A Halohydrin dehalogenase; haloalcohol dehalogenase, short- chain dehydrogenase/reductase family, lyase; 2.00A {Arthrobacter SP} | Back alignment and structure |
|---|
Probab=99.57 E-value=8.5e-15 Score=141.85 Aligned_cols=217 Identities=12% Similarity=0.084 Sum_probs=134.4
Q ss_pred CCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEE-E--ecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceE
Q 010075 12 NKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLF-V--RAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKIT 88 (519)
Q Consensus 12 ~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~L-v--R~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~ 88 (519)
||+++||||+|+||+++++.|++.| .+|+++ . |+.. ..+.+.+ +. ....
T Consensus 1 ~k~vlVTGas~gIG~~ia~~l~~~G---~~V~~~~~~~r~~~---~~~~~~~-------------~~---------~~~~ 52 (244)
T 1zmo_A 1 MVIALVTHARHFAGPAAVEALTQDG---YTVVCHDASFADAA---ERQRFES-------------EN---------PGTI 52 (244)
T ss_dssp -CEEEESSTTSTTHHHHHHHHHHTT---CEEEECCGGGGSHH---HHHHHHH-------------HS---------TTEE
T ss_pred CCEEEEECCCChHHHHHHHHHHHCC---CEEEEecCCcCCHH---HHHHHHH-------------Hh---------CCCc
Confidence 5899999999999999999999998 678887 5 7531 1111111 10 0111
Q ss_pred EEeccCCCCCCCCChhhhHHHH---hcCccEEEEcCccCCc----------cccHHHHHHHhHHHHHHHHHHHHhc---c
Q 010075 89 FVPGDISSEDLGLKDSNLKEEL---WNELDIMVNSAAITKF----------DERYDVAFGINTLGVIHLVNFAKKC---V 152 (519)
Q Consensus 89 ~v~gDl~~~~lgls~~~~~~~l---~~~vdiViH~Aa~v~f----------~~~~~~~~~~Nv~gt~~ll~~a~~~---~ 152 (519)
+. |..+ -....+.+ ..++|++||+||.... .+.++..+++|+.|+.++++.+... .
T Consensus 53 ~~--~~~~------v~~~~~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~ 124 (244)
T 1zmo_A 53 AL--AEQK------PERLVDATLQHGEAIDTIVSNDYIPRPMNRLPLEGTSEADIRQMFEALSIFPILLLQSAIAPLRAA 124 (244)
T ss_dssp EC--CCCC------GGGHHHHHGGGSSCEEEEEECCCCCTTGGGCCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHT
T ss_pred cc--CHHH------HHHHHHHHHHHcCCCCEEEECCCcCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc
Confidence 11 2221 12222233 2479999999997543 2467888999999999998887531 2
Q ss_pred CCceEEEEecceeecCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcHHH
Q 010075 153 KLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYV 232 (519)
Q Consensus 153 ~l~~~V~vSTa~v~~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~Y~ 232 (519)
+..++|++||...+... .....|+
T Consensus 125 ~~g~iv~isS~~~~~~~--------------------------------------------------------~~~~~Y~ 148 (244)
T 1zmo_A 125 GGASVIFITSSVGKKPL--------------------------------------------------------AYNPLYG 148 (244)
T ss_dssp TCEEEEEECCGGGTSCC--------------------------------------------------------TTCTTHH
T ss_pred CCcEEEEECChhhCCCC--------------------------------------------------------CCchHHH
Confidence 45799999998654321 1234699
Q ss_pred HHHHHHHHHHHHh-----hcCCcEEEEecCccccCCCCCCCcccccccccHHHHHHhhcCCceeeccCCCceeeeeeHHH
Q 010075 233 FTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDM 307 (519)
Q Consensus 233 ~sK~~aE~lv~~~-----~~~lp~~IvRPs~V~g~~~~p~~gw~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~d~vpVDd 307 (519)
.||+..+.+.+.. ..++.+..++||.|-.+.... | ...... ......... ..+ ...+...+|
T Consensus 149 asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~---~-~~~~~~-~~~~~~~~~---~~p-----~~r~~~pe~ 215 (244)
T 1zmo_A 149 PARAATVALVESAAKTLSRDGILLYAIGPNFFNNPTYFP---T-SDWENN-PELRERVDR---DVP-----LGRLGRPDE 215 (244)
T ss_dssp HHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCBTTTBC---H-HHHHHC-HHHHHHHHH---HCT-----TCSCBCHHH
T ss_pred HHHHHHHHHHHHHHHHHhhcCcEEEEEeeCCCcCCcccc---c-ccccch-HHHHHHHhc---CCC-----CCCCcCHHH
Confidence 9999999888764 347999999999886653200 0 000000 111111100 001 113578899
Q ss_pred HHHHHHHHHHHhccCCCCCcEEEecCC
Q 010075 308 VVNAMIVAMVAHAKQPSDANIYHVGSS 334 (519)
Q Consensus 308 va~aii~a~~~~~~~~~~~~iyni~s~ 334 (519)
+|++++.++..... .-.++++.+.+|
T Consensus 216 vA~~v~~l~s~~~~-~~tG~~i~vdgG 241 (244)
T 1zmo_A 216 MGALITFLASRRAA-PIVGQFFAFTGG 241 (244)
T ss_dssp HHHHHHHHHTTTTG-GGTTCEEEESTT
T ss_pred HHHHHHHHcCcccc-CccCCEEEeCCC
Confidence 99999998863221 113678888766
|
| >4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A | Back alignment and structure |
|---|
Probab=99.56 E-value=1.8e-13 Score=133.63 Aligned_cols=229 Identities=15% Similarity=0.073 Sum_probs=146.5
Q ss_pred cCCCEEEEeCCcc--HHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCce
Q 010075 10 LENKTILVSGVTG--FVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKI 87 (519)
Q Consensus 10 ~~~k~VlITGaTG--FlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v 87 (519)
++||+++||||+| .||+++++.|++.| .+|++..|+.... +++.+++ ++. -..++
T Consensus 4 l~gK~alVTGaa~~~GIG~aiA~~la~~G---a~Vvi~~r~~~~~---~~~~~~~----------~~~-------~~~~~ 60 (256)
T 4fs3_A 4 LENKTYVIMGIANKRSIAFGVAKVLDQLG---AKLVFTYRKERSR---KELEKLL----------EQL-------NQPEA 60 (256)
T ss_dssp CTTCEEEEECCCSTTCHHHHHHHHHHHTT---CEEEEEESSGGGH---HHHHHHH----------GGG-------TCSSC
T ss_pred CCCCEEEEECCCCCchHHHHHHHHHHHCC---CEEEEEECCHHHH---HHHHHHH----------Hhc-------CCCcE
Confidence 5799999999987 89999999999999 6888988875433 2222111 111 12578
Q ss_pred EEEeccCCCCCCCCChhhhHHHHhcCccEEEEcCccCCc-------c----ccHHHHHHHhHHHHHHHHHHHHhc-cCCc
Q 010075 88 TFVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF-------D----ERYDVAFGINTLGVIHLVNFAKKC-VKLK 155 (519)
Q Consensus 88 ~~v~gDl~~~~lgls~~~~~~~l~~~vdiViH~Aa~v~f-------~----~~~~~~~~~Nv~gt~~ll~~a~~~-~~l~ 155 (519)
.++.+|+++++-.....+...+...++|++||+||.... . +.+...+++|+.++..+.+.+... ++-.
T Consensus 61 ~~~~~Dv~~~~~v~~~~~~~~~~~G~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~G 140 (256)
T 4fs3_A 61 HLYQIDVQSDEEVINGFEQIGKDVGNIDGVYHSIAFANMEDLRGRFSETSREGFLLAQDISSYSLTIVAHEAKKLMPEGG 140 (256)
T ss_dssp EEEECCTTCHHHHHHHHHHHHHHHCCCSEEEECCCCCCGGGGTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCTTCE
T ss_pred EEEEccCCCHHHHHHHHHHHHHHhCCCCEEEeccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHHHHHHhccCC
Confidence 899999996321000001111223579999999997532 1 345667889999998888777543 3446
Q ss_pred eEEEEecceeecCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcHHHHHH
Q 010075 156 VFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTK 235 (519)
Q Consensus 156 ~~V~vSTa~v~~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~Y~~sK 235 (519)
++|++||....... +....|+.||
T Consensus 141 ~IVnisS~~~~~~~--------------------------------------------------------~~~~~Y~asK 164 (256)
T 4fs3_A 141 SIVATTYLGGEFAV--------------------------------------------------------QNYNVMGVAK 164 (256)
T ss_dssp EEEEEECGGGTSCC--------------------------------------------------------TTTHHHHHHH
T ss_pred EEEEEeccccccCc--------------------------------------------------------ccchhhHHHH
Confidence 89999987543211 2235799999
Q ss_pred HHHHHHHHHh-----hcCCcEEEEecCccccCCCCCCCcccccccccHHHHHHhhcCCceeeccCCCceeeeeeHHHHHH
Q 010075 236 TMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVN 310 (519)
Q Consensus 236 ~~aE~lv~~~-----~~~lp~~IvRPs~V~g~~~~p~~gw~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~d~vpVDdva~ 310 (519)
+..+.+.+.. ..++.+..|-||.|-.+..+...+ ............ |. .-+...+|||+
T Consensus 165 aal~~ltr~lA~Ela~~gIrVN~V~PG~i~T~~~~~~~~-------~~~~~~~~~~~~----Pl-----~R~g~peevA~ 228 (256)
T 4fs3_A 165 ASLEANVKYLALDLGPDNIRVNAISAGPIRTLSAKGVGG-------FNTILKEIKERA----PL-----KRNVDQVEVGK 228 (256)
T ss_dssp HHHHHHHHHHHHHHGGGTEEEEEEEECCCCSGGGTTCTT-------HHHHHHHHHHHS----TT-----SSCCCHHHHHH
T ss_pred HHHHHHHHHHHHHhCccCeEEEEEecCCCCChhhhhccC-------CHHHHHHHHhcC----CC-----CCCcCHHHHHH
Confidence 9888877654 458999999999887654432211 112222222111 10 11345789999
Q ss_pred HHHHHHHHhccCCCCCcEEEecCC
Q 010075 311 AMIVAMVAHAKQPSDANIYHVGSS 334 (519)
Q Consensus 311 aii~a~~~~~~~~~~~~iyni~s~ 334 (519)
+++.++.... .--.++++.+.+|
T Consensus 229 ~v~fL~Sd~a-~~iTG~~i~VDGG 251 (256)
T 4fs3_A 229 TAAYLLSDLS-SGVTGENIHVDSG 251 (256)
T ss_dssp HHHHHHSGGG-TTCCSCEEEESTT
T ss_pred HHHHHhCchh-cCccCCEEEECcC
Confidence 9998886432 2223678888776
|
| >3mje_A AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.36A {Streptomyces nodosus} PDB: 3mjc_A* 3mjs_A* 3mjv_A* 3mjt_A* | Back alignment and structure |
|---|
Probab=99.55 E-value=8.5e-14 Score=148.10 Aligned_cols=202 Identities=16% Similarity=0.163 Sum_probs=141.5
Q ss_pred CCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEEe
Q 010075 12 NKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVP 91 (519)
Q Consensus 12 ~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v~ 91 (519)
++++|||||+|+||.++++.|++.|. .+|+++.|+.......+++.+++ .+ ...++.++.
T Consensus 239 ~~~vLITGgsgGIG~alA~~La~~Ga--~~vvl~~R~~~~~~~~~~l~~~l---------~~---------~g~~v~~~~ 298 (496)
T 3mje_A 239 HGSVLVTGGTGGIGGRVARRLAEQGA--AHLVLTSRRGADAPGAAELRAEL---------EQ---------LGVRVTIAA 298 (496)
T ss_dssp CSEEEEETCSSHHHHHHHHHHHHTTC--SEEEEEESSGGGSTTHHHHHHHH---------HH---------TTCEEEEEE
T ss_pred CCEEEEECCCCchHHHHHHHHHHCCC--cEEEEEeCCCCChHHHHHHHHHH---------Hh---------cCCeEEEEE
Confidence 48999999999999999999999874 47888888754443333333222 11 135789999
Q ss_pred ccCCCCCCCCChhhhHHHHhc------CccEEEEcCccC-Cc-------cccHHHHHHHhHHHHHHHHHHHHhccCCceE
Q 010075 92 GDISSEDLGLKDSNLKEELWN------ELDIMVNSAAIT-KF-------DERYDVAFGINTLGVIHLVNFAKKCVKLKVF 157 (519)
Q Consensus 92 gDl~~~~lgls~~~~~~~l~~------~vdiViH~Aa~v-~f-------~~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~ 157 (519)
+|+++ .+....+++ .+|+|||+||.. .. .+.++..+++|+.|+.++.+++... .+.+|
T Consensus 299 ~Dvtd-------~~~v~~~~~~i~~~g~ld~vVh~AGv~~~~~~l~~~t~e~~~~vl~~nv~g~~~L~~~~~~~-~~~~i 370 (496)
T 3mje_A 299 CDAAD-------REALAALLAELPEDAPLTAVFHSAGVAHDDAPVADLTLGQLDALMRAKLTAARHLHELTADL-DLDAF 370 (496)
T ss_dssp CCTTC-------HHHHHHHHHTCCTTSCEEEEEECCCCCCSCCCTTTCCHHHHHHHHHTTHHHHHHHHHHHTTS-CCSEE
T ss_pred ccCCC-------HHHHHHHHHHHHHhCCCeEEEECCcccCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHhhcc-CCCEE
Confidence 99995 333345443 489999999986 21 2467888999999999999999885 77899
Q ss_pred EEEecceeecCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcHHHHHHHH
Q 010075 158 VHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTM 237 (519)
Q Consensus 158 V~vSTa~v~~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~Y~~sK~~ 237 (519)
|++||....... .....|+.+|+.
T Consensus 371 V~~SS~a~~~g~--------------------------------------------------------~g~~~YaAaKa~ 394 (496)
T 3mje_A 371 VLFSSGAAVWGS--------------------------------------------------------GGQPGYAAANAY 394 (496)
T ss_dssp EEEEEHHHHTTC--------------------------------------------------------TTCHHHHHHHHH
T ss_pred EEEeChHhcCCC--------------------------------------------------------CCcHHHHHHHHH
Confidence 999997543211 113569999999
Q ss_pred HHHHHHHh-hcCCcEEEEecCccccCCCCCCCcccccccccHHHHHHhhcCCceeeccCCCceeeeeeHHHHHHHHHHHH
Q 010075 238 GEMLMQQS-KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMIVAM 316 (519)
Q Consensus 238 aE~lv~~~-~~~lp~~IvRPs~V~g~~~~p~~gw~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~d~vpVDdva~aii~a~ 316 (519)
.+.+.++. ..+++++.+.||.+.++... ...... ..+. ..| ...++.++++.++..++
T Consensus 395 ldala~~~~~~Gi~v~sV~pG~w~~~gm~------~~~~~~-~~l~--~~g------------~~~l~pe~~~~~l~~~l 453 (496)
T 3mje_A 395 LDALAEHRRSLGLTASSVAWGTWGEVGMA------TDPEVH-DRLV--RQG------------VLAMEPEHALGALDQML 453 (496)
T ss_dssp HHHHHHHHHHTTCCCEEEEECEESSSCC------------C-HHHH--HTT------------EEEECHHHHHHHHHHHH
T ss_pred HHHHHHHHHhcCCeEEEEECCcccCCccc------cChHHH-HHHH--hcC------------CCCCCHHHHHHHHHHHH
Confidence 99998876 67899999999988654321 000000 0010 011 23467889999998888
Q ss_pred HH
Q 010075 317 VA 318 (519)
Q Consensus 317 ~~ 318 (519)
..
T Consensus 454 ~~ 455 (496)
T 3mje_A 454 EN 455 (496)
T ss_dssp HH
T ss_pred cC
Confidence 64
|
| >4hp8_A 2-deoxy-D-gluconate 3-dehydrogenase; enzyme function initiative, EFI, structural genomics, oxidor; HET: NAP; 1.35A {Agrobacterium tumefaciens} | Back alignment and structure |
|---|
Probab=99.54 E-value=3.1e-13 Score=130.47 Aligned_cols=219 Identities=14% Similarity=0.086 Sum_probs=147.3
Q ss_pred cCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 010075 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (519)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (519)
++||+++||||++.||+++++.|.+.| .+|++..|+... ...+.+. +. ..++..
T Consensus 7 L~GKvalVTGas~GIG~aiA~~la~~G---a~Vvi~~r~~~~-~~~~~~~-------------~~---------g~~~~~ 60 (247)
T 4hp8_A 7 LEGRKALVTGANTGLGQAIAVGLAAAG---AEVVCAARRAPD-ETLDIIA-------------KD---------GGNASA 60 (247)
T ss_dssp CTTCEEEETTTTSHHHHHHHHHHHHTT---CEEEEEESSCCH-HHHHHHH-------------HT---------TCCEEE
T ss_pred CCCCEEEEeCcCCHHHHHHHHHHHHcC---CEEEEEeCCcHH-HHHHHHH-------------Hh---------CCcEEE
Confidence 689999999999999999999999999 678888887542 1112211 11 357889
Q ss_pred EeccCCCCCCCCChhhhHHHHh--cCccEEEEcCccCCc-------cccHHHHHHHhHHHHHHHHHHHHh-c---cCCce
Q 010075 90 VPGDISSEDLGLKDSNLKEELW--NELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKK-C---VKLKV 156 (519)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~--~~vdiViH~Aa~v~f-------~~~~~~~~~~Nv~gt~~ll~~a~~-~---~~l~~ 156 (519)
+.+|++++... +.+. .++|++||+||.... .+.++..+++|+.|+..+.+.+.+ + ++-.+
T Consensus 61 ~~~Dv~d~~~v-------~~~~~~g~iDiLVNNAGi~~~~~~~~~~~~~w~~~~~vNl~g~f~~~~~~~~~m~~~g~~G~ 133 (247)
T 4hp8_A 61 LLIDFADPLAA-------KDSFTDAGFDILVNNAGIIRRADSVEFSELDWDEVMDVNLKALFFTTQAFAKELLAKGRSGK 133 (247)
T ss_dssp EECCTTSTTTT-------TTSSTTTCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEE
T ss_pred EEccCCCHHHH-------HHHHHhCCCCEEEECCCCCCCCCcccccHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCCCcE
Confidence 99999975421 1222 469999999998643 257899999999999998887543 3 23468
Q ss_pred EEEEecceeecCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcHHHHHHH
Q 010075 157 FVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKT 236 (519)
Q Consensus 157 ~V~vSTa~v~~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~Y~~sK~ 236 (519)
+|++||....... .....|+.||+
T Consensus 134 IVnisS~~~~~g~--------------------------------------------------------~~~~~Y~asKa 157 (247)
T 4hp8_A 134 VVNIASLLSFQGG--------------------------------------------------------IRVPSYTAAKH 157 (247)
T ss_dssp EEEECCGGGTSCC--------------------------------------------------------SSCHHHHHHHH
T ss_pred EEEEechhhCCCC--------------------------------------------------------CCChHHHHHHH
Confidence 9999997543211 12346999999
Q ss_pred HHHHHHHHh-----hcCCcEEEEecCccccCCCCCCCcccccccccHHHHHHhhcCCceeeccCCCceeeeeeHHHHHHH
Q 010075 237 MGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNA 311 (519)
Q Consensus 237 ~aE~lv~~~-----~~~lp~~IvRPs~V~g~~~~p~~gw~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~d~vpVDdva~a 311 (519)
....+.+.. ..++.+..|-||.|-.+..+.. .........+....+ ..-+-..+|+|++
T Consensus 158 av~~ltr~lA~Ela~~gIrVNaV~PG~i~T~~~~~~-------~~~~~~~~~~~~~~P---------lgR~g~peeiA~~ 221 (247)
T 4hp8_A 158 GVAGLTKLLANEWAAKGINVNAIAPGYIETNNTEAL-------RADAARNKAILERIP---------AGRWGHSEDIAGA 221 (247)
T ss_dssp HHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHH-------HTSHHHHHHHHTTCT---------TSSCBCTHHHHHH
T ss_pred HHHHHHHHHHHHHhhcCeEEEEEeeCCCCCcchhhc-------ccCHHHHHHHHhCCC---------CCCCcCHHHHHHH
Confidence 888887754 5689999999999866533110 000111112222111 1123456899999
Q ss_pred HHHHHHHhccCCCCCcEEEecCC
Q 010075 312 MIVAMVAHAKQPSDANIYHVGSS 334 (519)
Q Consensus 312 ii~a~~~~~~~~~~~~iyni~s~ 334 (519)
++.++.... .--.++++.+.+|
T Consensus 222 v~fLaSd~a-~~iTG~~i~VDGG 243 (247)
T 4hp8_A 222 AVFLSSAAA-DYVHGAILNVDGG 243 (247)
T ss_dssp HHHHTSGGG-TTCCSCEEEESTT
T ss_pred HHHHhCchh-cCCcCCeEEECcc
Confidence 998886432 2223678888776
|
| >4h15_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, nysgrc; HET: MSE; 1.45A {Sinorhizobium meliloti} PDB: 4h16_A* | Back alignment and structure |
|---|
Probab=99.54 E-value=4.1e-14 Score=138.51 Aligned_cols=227 Identities=14% Similarity=0.133 Sum_probs=142.7
Q ss_pred cCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 010075 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (519)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (519)
++||+++||||++.||+++++.|++.| .+|++..|++... ..+...
T Consensus 9 L~GK~alVTGas~GIG~aia~~la~~G---a~V~~~~r~~~~~-------------------------------~~~~~~ 54 (261)
T 4h15_A 9 LRGKRALITAGTKGAGAATVSLFLELG---AQVLTTARARPEG-------------------------------LPEELF 54 (261)
T ss_dssp CTTCEEEESCCSSHHHHHHHHHHHHTT---CEEEEEESSCCTT-------------------------------SCTTTE
T ss_pred CCCCEEEEeccCcHHHHHHHHHHHHcC---CEEEEEECCchhC-------------------------------CCcEEE
Confidence 689999999999999999999999999 6889999875321 122346
Q ss_pred EeccCCCCCCCCChhhhHHHHhcCccEEEEcCccCC-----c----cccHHHHHHHhHHHHHHHHHHHHh-c--cCCceE
Q 010075 90 VPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITK-----F----DERYDVAFGINTLGVIHLVNFAKK-C--VKLKVF 157 (519)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~~~vdiViH~Aa~v~-----f----~~~~~~~~~~Nv~gt~~ll~~a~~-~--~~l~~~ 157 (519)
+.+|+++++-.-...+...+.+.++|++||+||... + .+.++..+++|+.|+..+.+.+.. + ++-.++
T Consensus 55 ~~~Dv~~~~~v~~~~~~~~~~~G~iDilVnnAG~~~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~I 134 (261)
T 4h15_A 55 VEADLTTKEGCAIVAEATRQRLGGVDVIVHMLGGSSAAGGGFSALSDDDWYNELSLNLFAAVRLDRQLVPDMVARGSGVV 134 (261)
T ss_dssp EECCTTSHHHHHHHHHHHHHHTSSCSEEEECCCCCCCCSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEE
T ss_pred EEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCccCCCCcccCCHHHHHHHHHHHhHHHHHHHHhhchhhhhcCCceE
Confidence 889999632100000111122346999999998642 2 256888899999999988877643 2 245789
Q ss_pred EEEecceeecCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcHHHHHHHH
Q 010075 158 VHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTM 237 (519)
Q Consensus 158 V~vSTa~v~~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~Y~~sK~~ 237 (519)
|++||........ .....|+.||+.
T Consensus 135 v~isS~~~~~~~~-------------------------------------------------------~~~~~Y~asKaa 159 (261)
T 4h15_A 135 VHVTSIQRVLPLP-------------------------------------------------------ESTTAYAAAKAA 159 (261)
T ss_dssp EEECCGGGTSCCT-------------------------------------------------------TTCHHHHHHHHH
T ss_pred EEEEehhhccCCC-------------------------------------------------------CccHHHHHHHHH
Confidence 9999975321100 113469999998
Q ss_pred HHHHHHHh-----hcCCcEEEEecCccccCCCCCCCc-ccc----cccccHHHHHHhhcCCceeeccCCCceeeeeeHHH
Q 010075 238 GEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPG-WVE----DLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDM 307 (519)
Q Consensus 238 aE~lv~~~-----~~~lp~~IvRPs~V~g~~~~p~~g-w~~----~~~~~~~~i~~~~~g~~~~~~~~~~~~~d~vpVDd 307 (519)
.+.+.+.. ..++.+..|-||.|-.+....... +.. ........+....... ...-+...+|
T Consensus 160 l~~lt~~lA~Ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------PlgR~g~pee 230 (261)
T 4h15_A 160 LSTYSKAMSKEVSPKGVRVVRVSPGWIETEASVRLAERLAKQAGTDLEGGKKIIMDGLGGI---------PLGRPAKPEE 230 (261)
T ss_dssp HHHHHHHHHHHHGGGTEEEEEEEECCBCCHHHHHHHHHHHHHTTCCHHHHHHHHHHHTTCC---------TTSSCBCHHH
T ss_pred HHHHHHHHHHHhhhhCeEEEEEeCCCcCCcchhhhhHHHHHhhccchhhHHHHHHHHhcCC---------CCCCCcCHHH
Confidence 88877654 558999999999886542210000 000 0000011111111111 1112456789
Q ss_pred HHHHHHHHHHHhccCCCCCcEEEecCCC
Q 010075 308 VVNAMIVAMVAHAKQPSDANIYHVGSSL 335 (519)
Q Consensus 308 va~aii~a~~~~~~~~~~~~iyni~s~~ 335 (519)
||++++.++.... .--.++++++.+|-
T Consensus 231 vA~~v~fLaS~~a-~~itG~~i~VDGG~ 257 (261)
T 4h15_A 231 VANLIAFLASDRA-ASITGAEYTIDGGT 257 (261)
T ss_dssp HHHHHHHHHSGGG-TTCCSCEEEESTTC
T ss_pred HHHHHHHHhCchh-cCccCcEEEECCcC
Confidence 9999998886432 22247888887773
|
| >1d7o_A Enoyl-[acyl-carrier protein] reductase (NADH) PRE; triclosan, enoyl reductase, oxidoreductase; HET: NAD TCL; 1.90A {Brassica napus} SCOP: c.2.1.2 PDB: 1eno_A* 1enp_A* 1cwu_A* | Back alignment and structure |
|---|
Probab=99.52 E-value=5e-13 Score=133.14 Aligned_cols=238 Identities=13% Similarity=0.098 Sum_probs=139.5
Q ss_pred cCCCEEEEeCCc--cHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCce
Q 010075 10 LENKTILVSGVT--GFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKI 87 (519)
Q Consensus 10 ~~~k~VlITGaT--GFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v 87 (519)
++||+++||||+ |+||+++++.|++.| .+|+++.|+.......+... ....+.+ ++... ....+..
T Consensus 6 l~~k~~lVTGas~~~GIG~aia~~la~~G---~~V~~~~r~~~~~~~~~~~~-----~~~~~~~-~~~~~---~~~~~~~ 73 (297)
T 1d7o_A 6 LRGKRAFIAGIADDNGYGWAVAKSLAAAG---AEILVGTWVPALNIFETSLR-----RGKFDQS-RVLPD---GSLMEIK 73 (297)
T ss_dssp CTTCEEEEECCSSSSSHHHHHHHHHHHTT---CEEEEEEEHHHHHHHHHHHH-----TTTTTGG-GBCTT---SSBCCEE
T ss_pred cCCCEEEEECCCCCCChHHHHHHHHHHCC---CeEEEeeccccchhhhhhhh-----hhHhhhh-hhhcc---ccccccc
Confidence 678999999999 999999999999998 67888877521000000000 0000000 00000 0000112
Q ss_pred EEEeccC--------C----C--------CCCCCChhhhHHHH---hcCccEEEEcCccCC-----c----cccHHHHHH
Q 010075 88 TFVPGDI--------S----S--------EDLGLKDSNLKEEL---WNELDIMVNSAAITK-----F----DERYDVAFG 135 (519)
Q Consensus 88 ~~v~gDl--------~----~--------~~lgls~~~~~~~l---~~~vdiViH~Aa~v~-----f----~~~~~~~~~ 135 (519)
..+.+|+ + + ++ +-....+.+ ..++|++||+||... + .+.++..++
T Consensus 74 ~~~~~~~~~~~~~dv~~Dv~~~~~~~~~~~~---~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~ 150 (297)
T 1d7o_A 74 KVYPLDAVFDNPEDVPEDVKANKRYAGSSNW---TVQEAAECVRQDFGSIDILVHSLANGPEVSKPLLETSRKGYLAAIS 150 (297)
T ss_dssp EEEEECTTCCSGGGSCHHHHTSHHHHHCCCC---SHHHHHHHHHHHHSCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHH
T ss_pred cccccceeccchhhhhhhhhccccccccCHH---HHHHHHHHHHHHcCCCCEEEECCccCccCCCCcccCCHHHHHHHHH
Confidence 3333332 2 1 10 011122122 247999999998532 1 245778899
Q ss_pred HhHHHHHHHHHHHHhc-cCCceEEEEecceeecCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHH
Q 010075 136 INTLGVIHLVNFAKKC-VKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFM 214 (519)
Q Consensus 136 ~Nv~gt~~ll~~a~~~-~~l~~~V~vSTa~v~~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 214 (519)
+|+.|+..+++.+.+. .+-.++|++||........
T Consensus 151 vN~~g~~~l~~~~~~~m~~~g~iv~isS~~~~~~~~-------------------------------------------- 186 (297)
T 1d7o_A 151 ASSYSFVSLLSHFLPIMNPGGASISLTYIASERIIP-------------------------------------------- 186 (297)
T ss_dssp HHTHHHHHHHHHHGGGEEEEEEEEEEECGGGTSCCT--------------------------------------------
T ss_pred HhhhHHHHHHHHHHHHhccCceEEEEeccccccCCC--------------------------------------------
Confidence 9999999999998763 2226899999975432110
Q ss_pred hhccccccccCCCCcHHHHHHHHHHHHHHHh----h--cCCcEEEEecCccccCCCCCCCcccccccccHHHHHHhhcCC
Q 010075 215 KNLGTERAKLHGWPNTYVFTKTMGEMLMQQS----K--ENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGN 288 (519)
Q Consensus 215 ~~lg~~~~~~~~~~n~Y~~sK~~aE~lv~~~----~--~~lp~~IvRPs~V~g~~~~p~~gw~~~~~~~~~~i~~~~~g~ 288 (519)
.+...|+.||+..+.+.+.. . .++.+..++||.|.++..... ..............
T Consensus 187 -----------~~~~~Y~asKaa~~~~~~~la~e~~~~~gi~vn~v~PG~v~T~~~~~~-------~~~~~~~~~~~~~~ 248 (297)
T 1d7o_A 187 -----------GYGGGMSSAKAALESDTRVLAFEAGRKQNIRVNTISAGPLGSRAAKAI-------GFIDTMIEYSYNNA 248 (297)
T ss_dssp -----------TCTTTHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCBCCCSSCC-------SHHHHHHHHHHHHS
T ss_pred -----------CcchHHHHHHHHHHHHHHHHHHHhCcccCcEEEEEeccccccchhhhc-------cccHHHHHHhhccC
Confidence 11146999999999887754 2 589999999999988754321 00111111111110
Q ss_pred ceeeccCCCceeeeeeHHHHHHHHHHHHHHhccCCCCCcEEEecCC
Q 010075 289 LRCLVGETKVIMDVIPVDMVVNAMIVAMVAHAKQPSDANIYHVGSS 334 (519)
Q Consensus 289 ~~~~~~~~~~~~d~vpVDdva~aii~a~~~~~~~~~~~~iyni~s~ 334 (519)
+ ...+..++|+|++++.++.... ..-.++++++.+|
T Consensus 249 ----p-----~~r~~~pedvA~~v~~l~s~~~-~~itG~~i~vdgG 284 (297)
T 1d7o_A 249 ----P-----IQKTLTADEVGNAAAFLVSPLA-SAITGATIYVDNG 284 (297)
T ss_dssp ----S-----SCCCBCHHHHHHHHHHHTSGGG-TTCCSCEEEESTT
T ss_pred ----C-----CCCCCCHHHHHHHHHHHhCccc-cCCCCCEEEECCC
Confidence 1 1134678999999988875332 2223678999887
|
| >3qp9_A Type I polyketide synthase pikaii; rossmann fold, ketoreductase, epimerization, oxidoreductase; 1.88A {Streptomyces venezuelae} | Back alignment and structure |
|---|
Probab=99.51 E-value=3e-13 Score=145.24 Aligned_cols=207 Identities=14% Similarity=0.148 Sum_probs=139.6
Q ss_pred hhcCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEE-EecCCc----------ccHHHHHHHHHhhhhhHHHHHhhhc
Q 010075 8 EFLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLF-VRAADI----------DSAALRFQNEVLAKDVFNVLKEKWG 76 (519)
Q Consensus 8 ~~~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~L-vR~~~~----------~~~~~rl~~~~~~~~~f~~l~~~~~ 76 (519)
.+-.++++|||||+|+||.++++.|++.|. ..|+++ .|+... ....+++.++ +++.
T Consensus 247 ~~~~~~~vLITGgsgGIG~~lA~~La~~G~--~~vvl~~~R~~~~~~~~~~~~~~~~~~~~~~~~---------l~~~-- 313 (525)
T 3qp9_A 247 WWQADGTVLVTGAEEPAAAEAARRLARDGA--GHLLLHTTPSGSEGAEGTSGAAEDSGLAGLVAE---------LADL-- 313 (525)
T ss_dssp SSCTTSEEEESSTTSHHHHHHHHHHHHHTC--CEEEEEECCCC---------------CHHHHHH---------HHHH--
T ss_pred eecCCCEEEEECCCCcHHHHHHHHHHHcCC--CEEEEEeCCCCCCccccccccccCHHHHHHHHH---------HHhc--
Confidence 455789999999999999999999999984 346666 777432 1111222111 1111
Q ss_pred cccccccCCceEEEeccCCCCCCCCChhhhHHHHhc------CccEEEEcCccCCc-------cccHHHHHHHhHHHHHH
Q 010075 77 TRLNSFISEKITFVPGDISSEDLGLKDSNLKEELWN------ELDIMVNSAAITKF-------DERYDVAFGINTLGVIH 143 (519)
Q Consensus 77 ~~~~~~~~~~v~~v~gDl~~~~lgls~~~~~~~l~~------~vdiViH~Aa~v~f-------~~~~~~~~~~Nv~gt~~ 143 (519)
..++.++.+|+++ .+..+.+++ .+|+|||+||.... .+.++..+++|+.|+.+
T Consensus 314 -------g~~v~~~~~Dvtd-------~~~v~~~~~~i~~~g~id~vVh~AGv~~~~~~~~~~~~~~~~v~~~nv~g~~~ 379 (525)
T 3qp9_A 314 -------GATATVVTCDLTD-------AEAAARLLAGVSDAHPLSAVLHLPPTVDSEPLAATDADALARVVTAKATAALH 379 (525)
T ss_dssp -------TCEEEEEECCTTS-------HHHHHHHHHTSCTTSCEEEEEECCCCCCCCCTTTCCHHHHHHHHHHHHHHHHH
T ss_pred -------CCEEEEEECCCCC-------HHHHHHHHHHHHhcCCCcEEEECCcCCCCCchhhCCHHHHHHHHHHHHHHHHH
Confidence 3578999999995 333445543 47999999998642 25678889999999999
Q ss_pred HHHHHHhccC----CceEEEEecceeecCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccc
Q 010075 144 LVNFAKKCVK----LKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGT 219 (519)
Q Consensus 144 ll~~a~~~~~----l~~~V~vSTa~v~~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~ 219 (519)
+.+++..... ..+||++||.......
T Consensus 380 L~~~~~~~~~~~~~~~~iV~~SS~a~~~g~-------------------------------------------------- 409 (525)
T 3qp9_A 380 LDRLLREAAAAGGRPPVLVLFSSVAAIWGG-------------------------------------------------- 409 (525)
T ss_dssp HHHHHHHTC----CCCEEEEEEEGGGTTCC--------------------------------------------------
T ss_pred HHHHhccccccCCCCCEEEEECCHHHcCCC--------------------------------------------------
Confidence 9999887521 7899999997653211
Q ss_pred cccccCCCCcHHHHHHHHHHHHHHHh-hcCCcEEEEecCccccCCCCCCCcccccccccHHHHHHhhcCCceeeccCCCc
Q 010075 220 ERAKLHGWPNTYVFTKTMGEMLMQQS-KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKV 298 (519)
Q Consensus 220 ~~~~~~~~~n~Y~~sK~~aE~lv~~~-~~~lp~~IvRPs~V~g~~~~p~~gw~~~~~~~~~~i~~~~~g~~~~~~~~~~~ 298 (519)
.....|+.+|+..+.+..+. ..+++++.|.||.+-+.. ... ......+. ..|
T Consensus 410 ------~g~~~YaaaKa~l~~lA~~~~~~gi~v~sI~pG~~~tgm-------~~~-~~~~~~~~--~~g----------- 462 (525)
T 3qp9_A 410 ------AGQGAYAAGTAFLDALAGQHRADGPTVTSVAWSPWEGSR-------VTE-GATGERLR--RLG----------- 462 (525)
T ss_dssp ------TTCHHHHHHHHHHHHHHTSCCSSCCEEEEEEECCBTTSG-------GGS-SHHHHHHH--HTT-----------
T ss_pred ------CCCHHHHHHHHHHHHHHHHHHhCCCCEEEEECCcccccc-------ccc-hhhHHHHH--hcC-----------
Confidence 12356999999999997766 568999999999882211 100 00001111 111
Q ss_pred eeeeeeHHHHHHHHHHHHHHh
Q 010075 299 IMDVIPVDMVVNAMIVAMVAH 319 (519)
Q Consensus 299 ~~d~vpVDdva~aii~a~~~~ 319 (519)
...++.+++++++..++...
T Consensus 463 -~~~l~pee~a~~l~~~l~~~ 482 (525)
T 3qp9_A 463 -LRPLAPATALTALDTALGHG 482 (525)
T ss_dssp -BCCBCHHHHHHHHHHHHHHT
T ss_pred -CCCCCHHHHHHHHHHHHhCC
Confidence 13478999999999998753
|
| >1y7t_A Malate dehydrogenase; NAD-dependent-MDH-NADPH complex, oxidoreductase; HET: NDP; 1.65A {Thermus thermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1iz9_A* 2cvq_A* 1bmd_A* 1bdm_A* 1wze_A* 1wzi_A* | Back alignment and structure |
|---|
Probab=99.48 E-value=1.3e-14 Score=146.93 Aligned_cols=177 Identities=13% Similarity=0.043 Sum_probs=114.0
Q ss_pred CCEEEEeCCccHHHHHHHHHHHHhCC----CccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCce
Q 010075 12 NKTILVSGVTGFVAKVFIEKILRVQP----NVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKI 87 (519)
Q Consensus 12 ~k~VlITGaTGFlG~~Lv~~LL~~g~----~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v 87 (519)
.++|+||||+||||++++..|+..+. .+.+|.++.+..... ..+....++ . ...+
T Consensus 4 ~mkVlVtGaaGfIG~~l~~~L~~~g~~~~~~~~ev~l~D~~~~~~-~~~g~~~dl---------~-----------~~~~ 62 (327)
T 1y7t_A 4 PVRVAVTGAAGQIGYSLLFRIAAGEMLGKDQPVILQLLEIPQAMK-ALEGVVMEL---------E-----------DCAF 62 (327)
T ss_dssp CEEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCGGGHH-HHHHHHHHH---------H-----------TTTC
T ss_pred CCEEEEECCCCHHHHHHHHHHHhCCCCCCCCCCEEEEEeCCCchh-hccchhhhh---------h-----------cccc
Confidence 36899999999999999999998763 113788887753111 001000001 0 0111
Q ss_pred EEEeccCCCCCCCCChhhhHHHHhcCccEEEEcCccCCc-cccHHHHHHHhHHHHHHHHHHHHhccCCc-eEEEEeccee
Q 010075 88 TFVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF-DERYDVAFGINTLGVIHLVNFAKKCVKLK-VFVHVSTAYV 165 (519)
Q Consensus 88 ~~v~gDl~~~~lgls~~~~~~~l~~~vdiViH~Aa~v~f-~~~~~~~~~~Nv~gt~~ll~~a~~~~~l~-~~V~vSTa~v 165 (519)
.++ +|+.+ ..+. ...++++|+|||+||..+. ..+....++.|+.+++++++.+++..+.+ +++++|+...
T Consensus 63 ~~~-~di~~------~~~~-~~a~~~~D~Vih~Ag~~~~~~~~~~~~~~~Nv~~t~~l~~a~~~~~~~~~~vvv~snp~~ 134 (327)
T 1y7t_A 63 PLL-AGLEA------TDDP-KVAFKDADYALLVGAAPRKAGMERRDLLQVNGKIFTEQGRALAEVAKKDVKVLVVGNPAN 134 (327)
T ss_dssp TTE-EEEEE------ESCH-HHHTTTCSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECSSSHH
T ss_pred ccc-CCeEe------ccCh-HHHhCCCCEEEECCCcCCCCCCCHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEeCCchh
Confidence 122 56653 1222 3556789999999998753 35667889999999999999999863244 6676665320
Q ss_pred -ecCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcHHHHHHHHHHHHHHH
Q 010075 166 -AGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLMQQ 244 (519)
Q Consensus 166 -~~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~Y~~sK~~aE~lv~~ 244 (519)
.. .+.++. + ...++.+.|+.||..+|++...
T Consensus 135 ~~~----~~~~~~----~----------------------------------------~~~~p~~~yg~tkl~~er~~~~ 166 (327)
T 1y7t_A 135 TNA----LIAYKN----A----------------------------------------PGLNPRNFTAMTRLDHNRAKAQ 166 (327)
T ss_dssp HHH----HHHHHT----C----------------------------------------TTSCGGGEEECCHHHHHHHHHH
T ss_pred hhH----HHHHHH----c----------------------------------------CCCChhheeccchHHHHHHHHH
Confidence 00 000000 0 0013346799999999998876
Q ss_pred h--hcCCcEEEEecCccccCCCC
Q 010075 245 S--KENLSLVIIRPTVVSGTYKE 265 (519)
Q Consensus 245 ~--~~~lp~~IvRPs~V~g~~~~ 265 (519)
+ ..+++++++||++|||+..+
T Consensus 167 ~a~~~g~~~~~vr~~~V~G~h~~ 189 (327)
T 1y7t_A 167 LAKKTGTGVDRIRRMTVWGNHSS 189 (327)
T ss_dssp HHHHHTCCGGGEECCEEEBCSST
T ss_pred HHHHhCcChhheeeeEEEcCCCC
Confidence 6 45899999999999998653
|
| >3oml_A GH14720P, peroxisomal multifunctional enzyme type 2, CG3415; rossmann fold, hot-DOG fold, hydratase 2 motif, peroxisomes, oxidoreductase; 2.15A {Drosophila melanogaster} | Back alignment and structure |
|---|
Probab=99.43 E-value=3.4e-13 Score=147.70 Aligned_cols=217 Identities=11% Similarity=0.087 Sum_probs=132.7
Q ss_pred hhcCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCC------cccHHHHHHHHHhhhhhHHHHHhhhcccccc
Q 010075 8 EFLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAAD------IDSAALRFQNEVLAKDVFNVLKEKWGTRLNS 81 (519)
Q Consensus 8 ~~~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~------~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~ 81 (519)
.-++||+++||||+|+||+++++.|++.| .+|+++.|... .....+.+.+ .+++..
T Consensus 15 ~~l~gk~~lVTGas~GIG~aiA~~La~~G---a~Vv~~~r~~~~~~~~~~~~~~~~~~~---------~i~~~~------ 76 (613)
T 3oml_A 15 LRYDGRVAVVTGAGAGLGREYALLFAERG---AKVVVNDLGGTHSGDGASQRAADIVVD---------EIRKAG------ 76 (613)
T ss_dssp CCCTTCEEEETTTTSHHHHHHHHHHHHTT---CEEEEC--------------CHHHHHH---------HHHHTT------
T ss_pred cCCCCCEEEEeCCCcHHHHHHHHHHHHCC---CEEEEEeCCcccccccCCHHHHHHHHH---------HHHHhC------
Confidence 34789999999999999999999999998 68888877321 1111111111 111111
Q ss_pred ccCCceEEEeccCCCCCCCCChhhhHHHHh-------cCccEEEEcCccCCc-------cccHHHHHHHhHHHHHHHHHH
Q 010075 82 FISEKITFVPGDISSEDLGLKDSNLKEELW-------NELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNF 147 (519)
Q Consensus 82 ~~~~~v~~v~gDl~~~~lgls~~~~~~~l~-------~~vdiViH~Aa~v~f-------~~~~~~~~~~Nv~gt~~ll~~ 147 (519)
.. +.+|+++. .+ .+.++ .++|++||+||.... .+.++..+++|+.|+..++++
T Consensus 77 ---~~---~~~D~~d~------~~-~~~~~~~~~~~~g~iDiLVnnAGi~~~~~~~~~~~~~~~~~~~vNl~g~~~l~~~ 143 (613)
T 3oml_A 77 ---GE---AVADYNSV------ID-GAKVIETAIKAFGRVDILVNNAGILRDRSLVKTSEQDWNLVNDVHLKGSFKCTQA 143 (613)
T ss_dssp ---CC---EEECCCCG------GG-HHHHHC----------CEECCCCCCCCCCSTTCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred ---Ce---EEEEeCCH------HH-HHHHHHHHHHHCCCCcEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHH
Confidence 11 23688853 22 22333 369999999998642 256788899999999999988
Q ss_pred HHh-c--cCCceEEEEecceeecCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhcccccccc
Q 010075 148 AKK-C--VKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKL 224 (519)
Q Consensus 148 a~~-~--~~l~~~V~vSTa~v~~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~ 224 (519)
+.. + .+..++|++||.......
T Consensus 144 ~~p~m~~~~~g~IV~isS~a~~~~~------------------------------------------------------- 168 (613)
T 3oml_A 144 AFPYMKKQNYGRIIMTSSNSGIYGN------------------------------------------------------- 168 (613)
T ss_dssp HHHHHHTTTCEEEEEECCHHHHHCC-------------------------------------------------------
T ss_pred HHHHHHHcCCCEEEEECCHHHcCCC-------------------------------------------------------
Confidence 733 1 245799999997543211
Q ss_pred CCCCcHHHHHHHHHHHHHHHh-----hcCCcEEEEecCccccCCCCCCCcccccccccHHHHHHhhcCCceeeccCCCce
Q 010075 225 HGWPNTYVFTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVI 299 (519)
Q Consensus 225 ~~~~n~Y~~sK~~aE~lv~~~-----~~~lp~~IvRPs~V~g~~~~p~~gw~~~~~~~~~~i~~~~~g~~~~~~~~~~~~ 299 (519)
.....|+.||+..+.+.+.. ..++.+..+.|+.+...... +. .. ..
T Consensus 169 -~~~~~Y~asKaal~~lt~~la~e~~~~gI~vn~v~Pg~~t~~~~~----~~-----~~-------------------~~ 219 (613)
T 3oml_A 169 -FGQVNYTAAKMGLIGLANTVAIEGARNNVLCNVIVPTAASRMTEG----IL-----PD-------------------IL 219 (613)
T ss_dssp -TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC------CC----CC-----CH-------------------HH
T ss_pred -CCChHHHHHHHHHHHHHHHHHHHhCccCeEEEEEECCCCChhhhh----cc-----ch-------------------hh
Confidence 12356999999999888754 45799999999865321110 00 00 01
Q ss_pred eeeeeHHHHHHHHHHHHHHhccCCCCCcEEEecCCCCCchhH
Q 010075 300 MDVIPVDMVVNAMIVAMVAHAKQPSDANIYHVGSSLRNPVTL 341 (519)
Q Consensus 300 ~d~vpVDdva~aii~a~~~~~~~~~~~~iyni~s~~~~~i~~ 341 (519)
...+..+++|++++.++... ....++++++.+|....++|
T Consensus 220 ~~~~~pedvA~~v~~L~s~~--~~~tG~~i~vdGG~~~~~~~ 259 (613)
T 3oml_A 220 FNELKPKLIAPVVAYLCHES--CEDNGSYIESAAGWATKLHM 259 (613)
T ss_dssp HTTCCGGGTHHHHHHTTSTT--CCCCSCEEEEETTEEEEECC
T ss_pred hhcCCHHHHHHHHHHhcCCC--cCCCceEEEECCCeEEEEEE
Confidence 12246789999998887643 22247888888774444444
|
| >2ptg_A Enoyl-acyl carrier reductase; apicomplexa, enoyl (acyl-carrier-P reductase, oxidoreductase; 2.60A {Eimeria tenella} | Back alignment and structure |
|---|
Probab=99.38 E-value=3.2e-12 Score=128.66 Aligned_cols=250 Identities=14% Similarity=0.037 Sum_probs=122.3
Q ss_pred cCCCEEEEeCC--ccHHHHHHHHHHHHhCCCccEEEEEEecC--------CcccHHHHHHHHHhhh---hhHHHHHhhhc
Q 010075 10 LENKTILVSGV--TGFVAKVFIEKILRVQPNVKKLYLFVRAA--------DIDSAALRFQNEVLAK---DVFNVLKEKWG 76 (519)
Q Consensus 10 ~~~k~VlITGa--TGFlG~~Lv~~LL~~g~~v~~V~~LvR~~--------~~~~~~~rl~~~~~~~---~~f~~l~~~~~ 76 (519)
++||+++|||| +|+||+++++.|++.| .+|+++.|+. ......+... ++... ..-+.+++..+
T Consensus 7 l~~k~~lVTGa~~s~GIG~aia~~la~~G---~~Vv~~~r~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 82 (319)
T 2ptg_A 7 LRGKTAFVAGVADSNGYGWAICKLLRAAG---ARVLVGTWPPVYSIFKKGLESSRFEQDS-FYAQEPSSKVAAEAAEKPV 82 (319)
T ss_dssp CTTCEEEEECCCCTTSHHHHHHHHHHHTT---CEEEEEECHHHHHHHHC-------------------------------
T ss_pred cCCCEEEEeCCCCCCcHHHHHHHHHHHCC---CEEEEEeccccccchhhhhhhhhhhhhh-hhhcchhhhHHHHhhhccc
Confidence 67899999999 8999999999999998 6788887642 0000000000 00000 00001111000
Q ss_pred cccccccCCceEEEeccC--CCCC-CC--C------------ChhhhHHHH---hcCccEEEEcCccCC-----c----c
Q 010075 77 TRLNSFISEKITFVPGDI--SSED-LG--L------------KDSNLKEEL---WNELDIMVNSAAITK-----F----D 127 (519)
Q Consensus 77 ~~~~~~~~~~v~~v~gDl--~~~~-lg--l------------s~~~~~~~l---~~~vdiViH~Aa~v~-----f----~ 127 (519)
. ......+.+|+ +++. +- + +-....+.+ ..++|++||+||... + .
T Consensus 83 ~------~~~~~~~~~d~~~~~~~~~~~Dv~~~~~~~~~d~~~v~~~~~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~ 156 (319)
T 2ptg_A 83 D------LVFDKIYPLDAVFDTPQDVPPEVSSNKRYAGVGGFTISEVAEAVRADVGQIDILVHSLANGPEVTKPLLQTSR 156 (319)
T ss_dssp --------CCSEEEECCTTCCSGGGSCHHHHCC--CTTSCCCSHHHHHHHHHHHHSCEEEEEEEEECCSSSSSCGGGCCH
T ss_pred c------ccccccccccccccccccccchhcccccccccCHHHHHHHHHHHHHHcCCCCEEEECCccCCCCCCccccCCH
Confidence 0 00123444432 2221 00 0 011122222 247999999998541 2 2
Q ss_pred ccHHHHHHHhHHHHHHHHHHHHhc-cCCceEEEEecceeecCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCC
Q 010075 128 ERYDVAFGINTLGVIHLVNFAKKC-VKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAP 206 (519)
Q Consensus 128 ~~~~~~~~~Nv~gt~~ll~~a~~~-~~l~~~V~vSTa~v~~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~ 206 (519)
+.++..+++|+.|+..+++.+... .+-.++|++||........
T Consensus 157 ~~~~~~~~vN~~g~~~l~~~~~~~m~~~g~Iv~isS~~~~~~~~------------------------------------ 200 (319)
T 2ptg_A 157 KGYLAAVSSSSYSFVSLLQHFLPLMKEGGSALALSYIASEKVIP------------------------------------ 200 (319)
T ss_dssp HHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEEECC------------------------------------------
T ss_pred HHHHHHHhHhhHHHHHHHHHHHHHHhcCceEEEEeccccccccC------------------------------------
Confidence 457788999999999999998753 2226899999976432110
Q ss_pred hHHHHHHHhhccccccccCCCCcHHHHHHHHHHHHHHHh----h--cCCcEEEEecCccccCCCCCCCcccccccccHHH
Q 010075 207 QKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLMQQS----K--ENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTL 280 (519)
Q Consensus 207 ~~~~~~~~~~lg~~~~~~~~~~n~Y~~sK~~aE~lv~~~----~--~~lp~~IvRPs~V~g~~~~p~~gw~~~~~~~~~~ 280 (519)
.+...|+.||+..+.+.+.. . .++.+..++||.|..+.....+. . .....
T Consensus 201 -------------------~~~~~Y~asKaal~~l~~~la~el~~~~gIrvn~v~PG~v~T~~~~~~~~---~--~~~~~ 256 (319)
T 2ptg_A 201 -------------------GYGGGMSSAKAALESDCRTLAFEAGRARAVRVNCISAGPLKSRAASAIGK---A--GDKTF 256 (319)
T ss_dssp -------------------------------THHHHHHHHHHHHHHHCCEEEEEEECCCC--------------------
T ss_pred -------------------ccchhhHHHHHHHHHHHHHHHHHhccccCeeEEEEeeCCccChhhhhccc---c--cchhh
Confidence 11146999998888777643 2 58999999999987754321100 0 00000
Q ss_pred HHHhhcCCceeeccCCCceeeeeeHHHHHHHHHHHHHHhccCCCCCcEEEecCCC
Q 010075 281 FVASAQGNLRCLVGETKVIMDVIPVDMVVNAMIVAMVAHAKQPSDANIYHVGSSL 335 (519)
Q Consensus 281 i~~~~~g~~~~~~~~~~~~~d~vpVDdva~aii~a~~~~~~~~~~~~iyni~s~~ 335 (519)
...... . .........+...+++|++++.++.... ..-.++++.+.+|.
T Consensus 257 ~~~~~~----~-~~~~~p~~r~~~peevA~~v~~L~s~~~-~~itG~~i~vdGG~ 305 (319)
T 2ptg_A 257 IDLAID----Y-SEANAPLQKELESDDVGRAALFLLSPLA-RAVTGATLYVDNGL 305 (319)
T ss_dssp ---------------------CCCHHHHHHHHHHHTSGGG-TTCCSCEEEESTTC
T ss_pred HHHHHH----H-HhccCCCCCCCCHHHHHHHHHHHhCccc-CCccCCEEEECCCc
Confidence 000000 0 0000011234678999999998886432 22246788888773
|
| >3lt0_A Enoyl-ACP reductase; triclosan, triclosan variant, oxidoredu P.falciparum; HET: NAD FT1; 1.96A {Plasmodium falciparum} SCOP: c.2.1.2 PDB: 1v35_A* 3lsy_A* 1uh5_A* 3lt1_A* 3lt2_A* 3lt4_A* 3am4_A* 3am3_A* 3am5_A* 2o2y_A* 2oos_A* 2ol4_A* 2op0_A* 2op1_A* 1vrw_A* 1zsn_A* 1zw1_A* 1zxb_A* 1zxl_A* 2foi_A* ... | Back alignment and structure |
|---|
Probab=99.34 E-value=1.2e-11 Score=125.09 Aligned_cols=184 Identities=10% Similarity=0.053 Sum_probs=117.0
Q ss_pred CCCEEEEeCCcc--HHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcc-ccccccCCce
Q 010075 11 ENKTILVSGVTG--FVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGT-RLNSFISEKI 87 (519)
Q Consensus 11 ~~k~VlITGaTG--FlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~-~~~~~~~~~v 87 (519)
++|+++||||++ .||++++++|++.| .+|++..|+.... ...|-. ++++..... .........+
T Consensus 1 ~~k~~lITGas~~~GIG~aiA~~la~~G---~~Vv~~~~~~~~~-l~~r~~---------~~~~~~~~~~~~~~~~~~~~ 67 (329)
T 3lt0_A 1 NEDICFIAGIGDTNGYGWGIAKELSKRN---VKIIFGIWPPVYN-IFMKNY---------KNGKFDNDMIIDKDKKMNIL 67 (329)
T ss_dssp CCCEEEEECCSSSSSHHHHHHHHHHHTT---CEEEEEECHHHHH-HHHHHH---------HTTTTTGGGBCSSSCBCCEE
T ss_pred CCcEEEEECCCCCCchHHHHHHHHHHCC---CEEEEEecCcccc-ccccch---------HHHHHHHHHHHhhccccccc
Confidence 478999999875 99999999999998 6788777653110 111100 000000000 0000112447
Q ss_pred EEEeccCCCCCCC-------------CCh----hhhHHHH---hcCccEEEEcCccCC-----c----cccHHHHHHHhH
Q 010075 88 TFVPGDISSEDLG-------------LKD----SNLKEEL---WNELDIMVNSAAITK-----F----DERYDVAFGINT 138 (519)
Q Consensus 88 ~~v~gDl~~~~lg-------------ls~----~~~~~~l---~~~vdiViH~Aa~v~-----f----~~~~~~~~~~Nv 138 (519)
.++.+|+++.... +++ ....+.+ ..++|++||+||... + .+.++..+++|+
T Consensus 68 ~~~~~Dv~~~~~~~~~~~~~~~~~~Dlsd~~~v~~~~~~~~~~~g~iDilVnnAGi~~~~~~~~~~~~~~~~~~~~~vN~ 147 (329)
T 3lt0_A 68 DMLPFDASFDTANDIDEETKNNKRYNMLQNYTIEDVANLIHQKYGKINMLVHSLANAKEVQKDLLNTSRKGYLDALSKSS 147 (329)
T ss_dssp EEEECCTTCSSGGGCCHHHHTSHHHHTCCSCSHHHHHHHHHHHHCCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHT
T ss_pred ccccccccccchhhhhhhhcccccccccCHHHHHHHHHHHHHhcCCCcEEEECCcccccCCCCcccCCHHHHHHHHHHHh
Confidence 8899999876211 111 1122222 246999999999631 1 256788899999
Q ss_pred HHHHHHHHHHHhc-cCCceEEEEecceeecCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhc
Q 010075 139 LGVIHLVNFAKKC-VKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNL 217 (519)
Q Consensus 139 ~gt~~ll~~a~~~-~~l~~~V~vSTa~v~~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 217 (519)
.|+..+.+.+... ..-.++|++||.......
T Consensus 148 ~g~~~l~~~~~p~m~~~g~Iv~isS~~~~~~~------------------------------------------------ 179 (329)
T 3lt0_A 148 YSLISLCKYFVNIMKPQSSIISLTYHASQKVV------------------------------------------------ 179 (329)
T ss_dssp HHHHHHHHHHGGGEEEEEEEEEEECGGGTSCC------------------------------------------------
T ss_pred HHHHHHHHHHHHHHhhCCeEEEEeCccccCCC------------------------------------------------
Confidence 9999999988653 222589999997543211
Q ss_pred cccccccCCCC-cHHHHHHHHHHHHHHHh-----h-cCCcEEEEecCccccCC
Q 010075 218 GTERAKLHGWP-NTYVFTKTMGEMLMQQS-----K-ENLSLVIIRPTVVSGTY 263 (519)
Q Consensus 218 g~~~~~~~~~~-n~Y~~sK~~aE~lv~~~-----~-~~lp~~IvRPs~V~g~~ 263 (519)
... ..|+.||+..+.+.+.. . .++.+..+.||.|-.+.
T Consensus 180 --------~~~~~~Y~asKaal~~~~~~la~el~~~~gI~vn~v~PG~v~T~~ 224 (329)
T 3lt0_A 180 --------PGYGGGMSSAKAALESDTRVLAYHLGRNYNIRINTISAGPLKSRA 224 (329)
T ss_dssp --------TTCTTTHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCHH
T ss_pred --------CcchHHHHHHHHHHHHHHHHHHHHhCCccCeEEEEEecceeechh
Confidence 112 26999999888877643 3 58999999999987653
|
| >2o2s_A Enoyl-acyl carrier reductase; enoyl reductase, triclosan, rossmann fold, oxidoreductase; HET: NAD TCL; 2.60A {Toxoplasma gondii} PDB: 2o50_A 3nj8_A* | Back alignment and structure |
|---|
Probab=99.29 E-value=1.4e-11 Score=123.70 Aligned_cols=247 Identities=13% Similarity=0.059 Sum_probs=137.2
Q ss_pred cCCCEEEEeCC--ccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCce
Q 010075 10 LENKTILVSGV--TGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKI 87 (519)
Q Consensus 10 ~~~k~VlITGa--TGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v 87 (519)
++||+++|||| +|+||+++++.|++.| .+|+++.|+... .+..+.. +....+.+.+ .... .....+
T Consensus 7 l~gk~~lVTGa~~s~GIG~aia~~la~~G---~~Vv~~~r~~~~----~~~~~~~-~~~~~~~~~~-~~~~---~~~~~~ 74 (315)
T 2o2s_A 7 LRGQTAFVAGVADSHGYGWAIAKHLASAG---ARVALGTWPPVL----GLFQKSL-QSGRLDEDRK-LPDG---SLIEFA 74 (315)
T ss_dssp CTTCEEEEECCSSSSSHHHHHHHHHHTTT---CEEEEEECHHHH----HHHHHHH-HHTTTHHHHB-CTTS---CBCCCS
T ss_pred CCCCEEEEeCCCCCCChHHHHHHHHHHCC---CEEEEEeccccc----chhhhhh-hhhhhhhhhh-hhcc---cccccc
Confidence 67999999999 8999999999999998 678888875310 0000000 0000011110 0000 000012
Q ss_pred EEEeccC--CCCC-CC--C------------ChhhhHHHH---hcCccEEEEcCccCC-----c----cccHHHHHHHhH
Q 010075 88 TFVPGDI--SSED-LG--L------------KDSNLKEEL---WNELDIMVNSAAITK-----F----DERYDVAFGINT 138 (519)
Q Consensus 88 ~~v~gDl--~~~~-lg--l------------s~~~~~~~l---~~~vdiViH~Aa~v~-----f----~~~~~~~~~~Nv 138 (519)
..+.+|+ +++. +. + +-....+.+ ..++|++||+||... + .+.++..+++|+
T Consensus 75 ~~~~~d~~~~~~~~~~~Dv~~~~~~~~~d~~~v~~~~~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~~~N~ 154 (315)
T 2o2s_A 75 GVYPLDAAFDKPEDVPQDIKDNKRYAGVDGYTIKEVAVKVKQDLGNIDILVHSLANGPEVTKPLLETSRKGYLAASSNSA 154 (315)
T ss_dssp CEEECCTTCSSTTSSCHHHHTCGGGSSCCCCSHHHHHHHHHHHHCSEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHT
T ss_pred ccccccccccccchhhhhhhcccccccCCHHHHHHHHHHHHHhcCCCCEEEECCccCCcCCCCcccCCHHHHHHHHhhhh
Confidence 3333332 2211 00 0 011122122 247999999999542 2 245778899999
Q ss_pred HHHHHHHHHHHhc-cCCceEEEEecceeecCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhc
Q 010075 139 LGVIHLVNFAKKC-VKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNL 217 (519)
Q Consensus 139 ~gt~~ll~~a~~~-~~l~~~V~vSTa~v~~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 217 (519)
.|+..+++.+... .+-.++|++||........
T Consensus 155 ~g~~~l~~~~~~~m~~~g~Iv~isS~~~~~~~~----------------------------------------------- 187 (315)
T 2o2s_A 155 YSFVSLLQHFGPIMNEGGSAVTLSYLAAERVVP----------------------------------------------- 187 (315)
T ss_dssp HHHHHHHHHHSTTEEEEEEEEEEEEGGGTSCCT-----------------------------------------------
T ss_pred HHHHHHHHHHHHHHhcCCEEEEEecccccccCC-----------------------------------------------
Confidence 9999999998653 2226899999975432110
Q ss_pred cccccccCCCCcHHHHHHHHHHHHHHHh----h--cCCcEEEEecCccccCCCCCCCcccccccccHHHHHHhhcCCcee
Q 010075 218 GTERAKLHGWPNTYVFTKTMGEMLMQQS----K--ENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRC 291 (519)
Q Consensus 218 g~~~~~~~~~~n~Y~~sK~~aE~lv~~~----~--~~lp~~IvRPs~V~g~~~~p~~gw~~~~~~~~~~i~~~~~g~~~~ 291 (519)
.+...|+.||+..+.+.+.. . .++.+..++||.|..+.....+..... .....+.......
T Consensus 188 --------~~~~~Y~asKaal~~l~~~la~el~~~~gIrvn~v~PG~v~T~~~~~~~~~~~~-~~~~~~~~~~~~~---- 254 (315)
T 2o2s_A 188 --------GYGGGMSSAKAALESDTRTLAWEAGQKYGVRVNAISAGPLKSRAASAIGKSGEK-SFIDYAIDYSYNN---- 254 (315)
T ss_dssp --------TCCTTHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEECCCCCHHHHHTTCSSSS-CHHHHHHHHHHHH----
T ss_pred --------CccHHHHHHHHHHHHHHHHHHHHhCcccCeEEEEEecccccchhhhhccccccc-hhHHHHHHHHhcc----
Confidence 12246999999888887643 2 589999999999866432111000000 0000111000000
Q ss_pred eccCCCceeeeeeHHHHHHHHHHHHHHhccCCCCCcEEEecCC
Q 010075 292 LVGETKVIMDVIPVDMVVNAMIVAMVAHAKQPSDANIYHVGSS 334 (519)
Q Consensus 292 ~~~~~~~~~d~vpVDdva~aii~a~~~~~~~~~~~~iyni~s~ 334 (519)
.+ ..-+...+|+|++++.++.... ..-.++++.+.+|
T Consensus 255 ~p-----~~r~~~pedvA~~v~~L~s~~~-~~itG~~i~vdGG 291 (315)
T 2o2s_A 255 AP-----LRRDLHSDDVGGAALFLLSPLA-RAVSGVTLYVDNG 291 (315)
T ss_dssp SS-----SCCCCCHHHHHHHHHHHTSGGG-TTCCSCEEEESTT
T ss_pred CC-----CCCCCCHHHHHHHHHHHhCchh-ccCcCCEEEECCC
Confidence 01 1124578999999998886322 2224678888776
|
| >3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH, oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora spinosa} | Back alignment and structure |
|---|
Probab=99.22 E-value=8.1e-11 Score=132.33 Aligned_cols=168 Identities=17% Similarity=0.189 Sum_probs=123.5
Q ss_pred hcCCCEEEEeCCccHHHHHHHHHHH-HhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCce
Q 010075 9 FLENKTILVSGVTGFVAKVFIEKIL-RVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKI 87 (519)
Q Consensus 9 ~~~~k~VlITGaTGFlG~~Lv~~LL-~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v 87 (519)
+-.+++++||||+|.||+.+++.|. +.|. ++|+++.|+.......+++.+++ ++ ...++
T Consensus 527 ~~~~~~~lItGg~~GlG~aiA~~la~~~Ga--~~vvl~~R~~~~~~~~~~~~~~l---------~~---------~G~~v 586 (795)
T 3slk_A 527 WDAAGTVLVTGGTGALGAEVARHLVIERGV--RNLVLVSRRGPAASGAAELVAQL---------TA---------YGAEV 586 (795)
T ss_dssp CCTTSEEEEETTTSHHHHHHHHHHHHTSSC--CEEEEEESSGGGSTTHHHHHHHH---------HH---------TTCEE
T ss_pred cccccceeeccCCCCcHHHHHHHHHHHcCC--cEEEEeccCccchHHHHHHHHHH---------Hh---------cCCcE
Confidence 3468999999999999999999999 6663 46899999854433333332222 11 13578
Q ss_pred EEEeccCCCCCCCCChhhhHHHHhc------CccEEEEcCccCCc-------cccHHHHHHHhHHHHHHHHHHHHhccCC
Q 010075 88 TFVPGDISSEDLGLKDSNLKEELWN------ELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKCVKL 154 (519)
Q Consensus 88 ~~v~gDl~~~~lgls~~~~~~~l~~------~vdiViH~Aa~v~f-------~~~~~~~~~~Nv~gt~~ll~~a~~~~~l 154 (519)
.++.+|+++ .+..+.+++ .+|+|||+|+.... .+.++..+++|+.|+.++.+++. +.+
T Consensus 587 ~~~~~Dvsd-------~~~v~~~~~~~~~~~~id~lVnnAGv~~~~~~~~~t~e~~~~~~~~nv~G~~~l~~~~~--~~l 657 (795)
T 3slk_A 587 SLQACDVAD-------RETLAKVLASIPDEHPLTAVVHAAGVLDDGVSESLTVERLDQVLRPKVDGARNLLELID--PDV 657 (795)
T ss_dssp EEEECCTTC-------HHHHHHHHHTSCTTSCEEEEEECCCCCCCCCGGGCCHHHHHHHHCCCCCHHHHHHHHSC--TTS
T ss_pred EEEEeecCC-------HHHHHHHHHHHHHhCCCEEEEECCCcCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHHh--hCC
Confidence 999999995 333334443 48999999998642 25688889999999999999883 356
Q ss_pred ceEEEEecceeecCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcHHHHH
Q 010075 155 KVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFT 234 (519)
Q Consensus 155 ~~~V~vSTa~v~~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~Y~~s 234 (519)
.||++||....-.. .....|+.+
T Consensus 658 -~iV~~SS~ag~~g~--------------------------------------------------------~g~~~YaAa 680 (795)
T 3slk_A 658 -ALVLFSSVSGVLGS--------------------------------------------------------GGQGNYAAA 680 (795)
T ss_dssp -EEEEEEETHHHHTC--------------------------------------------------------SSCHHHHHH
T ss_pred -EEEEEccHHhcCCC--------------------------------------------------------CCCHHHHHH
Confidence 89999997543211 113469999
Q ss_pred HHHHHHHHHHh-hcCCcEEEEecCccccC
Q 010075 235 KTMGEMLMQQS-KENLSLVIIRPTVVSGT 262 (519)
Q Consensus 235 K~~aE~lv~~~-~~~lp~~IvRPs~V~g~ 262 (519)
|...+.+.++. ..++++..+-||.+-.+
T Consensus 681 ka~~~alA~~~~~~Gi~v~sI~pG~v~t~ 709 (795)
T 3slk_A 681 NSFLDALAQQRQSRGLPTRSLAWGPWAEH 709 (795)
T ss_dssp HHHHHHHHHHHHHTTCCEEEEEECCCSCC
T ss_pred HHHHHHHHHHHHHcCCeEEEEECCeECcc
Confidence 99999988877 66899999999987643
|
| >2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis} | Back alignment and structure |
|---|
Probab=99.17 E-value=3e-10 Score=123.98 Aligned_cols=207 Identities=14% Similarity=0.193 Sum_probs=134.6
Q ss_pred cCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 010075 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (519)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (519)
++||+++||||++.||+++++.|++.| .+|++..|... +.+.+++ ++. ..++..
T Consensus 320 l~gkvalVTGas~GIG~a~A~~la~~G---a~Vv~~~~~~~-----~~~~~~i---------~~~---------g~~~~~ 373 (604)
T 2et6_A 320 LKDKVVLITGAGAGLGKEYAKWFAKYG---AKVVVNDFKDA-----TKTVDEI---------KAA---------GGEAWP 373 (604)
T ss_dssp CTTCEEEESSCSSHHHHHHHHHHHHTT---CEEEEECSSCC-----HHHHHHH---------HHT---------TCEEEE
T ss_pred cCCCeEEEECcchHHHHHHHHHHHHCC---CEEEEEeCccH-----HHHHHHH---------Hhc---------CCeEEE
Confidence 678999999999999999999999999 67777765321 1111111 111 245677
Q ss_pred EeccC-CCCCCCCChhhhHHH---HhcCccEEEEcCccCCc-------cccHHHHHHHhHHHHHHHHHHHHh-c--cCCc
Q 010075 90 VPGDI-SSEDLGLKDSNLKEE---LWNELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKK-C--VKLK 155 (519)
Q Consensus 90 v~gDl-~~~~lgls~~~~~~~---l~~~vdiViH~Aa~v~f-------~~~~~~~~~~Nv~gt~~ll~~a~~-~--~~l~ 155 (519)
+.+|+ ++ .....+. ...++|++||+||.... .+.++..+++|+.|+..+.+.+.. + ++-.
T Consensus 374 ~~~Dv~~~------~~~~~~~~~~~~G~iDiLVnNAGi~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G 447 (604)
T 2et6_A 374 DQHDVAKD------SEAIIKNVIDKYGTIDILVNNAGILRDRSFAKMSKQEWDSVQQVHLIGTFNLSRLAWPYFVEKQFG 447 (604)
T ss_dssp ECCCHHHH------HHHHHHHHHHHHSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCE
T ss_pred EEcChHHH------HHHHHHHHHHhcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCC
Confidence 88898 43 1222222 24579999999997532 256888999999999998887643 2 2346
Q ss_pred eEEEEecceeecCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcHHHHHH
Q 010075 156 VFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTK 235 (519)
Q Consensus 156 ~~V~vSTa~v~~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~Y~~sK 235 (519)
++|++||....... .....|+.||
T Consensus 448 ~IVnisS~ag~~~~--------------------------------------------------------~~~~~Y~asK 471 (604)
T 2et6_A 448 RIINITSTSGIYGN--------------------------------------------------------FGQANYSSSK 471 (604)
T ss_dssp EEEEECCHHHHSCC--------------------------------------------------------TTBHHHHHHH
T ss_pred EEEEECChhhccCC--------------------------------------------------------CCChhHHHHH
Confidence 89999997532110 1124699999
Q ss_pred HHHHHHHHHh-----hcCCcEEEEecCccccCCCCCCCcccccccccHHHHHHhhcCCceeeccCCCceeeeeeHHHHHH
Q 010075 236 TMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVN 310 (519)
Q Consensus 236 ~~aE~lv~~~-----~~~lp~~IvRPs~V~g~~~~p~~gw~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~d~vpVDdva~ 310 (519)
+....+.+.. ..++.+..|-|+. .+ ++. .. ... . ...+....+++|.
T Consensus 472 aal~~lt~~la~El~~~gIrVn~v~PG~--~T---~m~---~~------~~~----~----------~~~~~~~pe~vA~ 523 (604)
T 2et6_A 472 AGILGLSKTMAIEGAKNNIKVNIVAPHA--ET---AMT---LS------IMR----E----------QDKNLYHADQVAP 523 (604)
T ss_dssp HHHHHHHHHHHHHHGGGTEEEEEEEECC--CC---CC--------------------------------CCSSCGGGTHH
T ss_pred HHHHHHHHHHHHHhCccCeEEEEEcCCC--CC---ccc---cc------cCc----h----------hhccCCCHHHHHH
Confidence 9888877654 4589999999983 21 110 00 000 0 0012246788999
Q ss_pred HHHHHHHHhccCCCCCcEEEecCC
Q 010075 311 AMIVAMVAHAKQPSDANIYHVGSS 334 (519)
Q Consensus 311 aii~a~~~~~~~~~~~~iyni~s~ 334 (519)
+++.++..... -.++++.+.+|
T Consensus 524 ~v~~L~s~~~~--itG~~~~vdGG 545 (604)
T 2et6_A 524 LLVYLGTDDVP--VTGETFEIGGG 545 (604)
T ss_dssp HHHHTTSTTCC--CCSCEEEEETT
T ss_pred HHHHHhCCccC--CCCcEEEECCC
Confidence 98887753322 34788888877
|
| >2uv9_A Fatty acid synthase alpha subunits; fungal, dehydratase, enoyl reductase, ketoacyl synthase, ketoacyl reductase; 3.1A {Thermomyces lanuginosus} PDB: 2uvb_A* | Back alignment and structure |
|---|
Probab=99.15 E-value=3.4e-10 Score=133.93 Aligned_cols=167 Identities=18% Similarity=0.137 Sum_probs=113.7
Q ss_pred cCCCEEEEeCCccH-HHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceE
Q 010075 10 LENKTILVSGVTGF-VAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKIT 88 (519)
Q Consensus 10 ~~~k~VlITGaTGF-lG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~ 88 (519)
++||++|||||+|+ ||+++++.|++.| .+|+++.|..... .+... +.+.++.+. ...++.
T Consensus 650 L~gKvaLVTGASgGgIG~aIAr~LA~~G---A~VVl~~~R~~~~--l~~~a---------~eL~~el~~-----~G~~v~ 710 (1878)
T 2uv9_A 650 FQGKHALMTGAGAGSIGAEVLQGLLSGG---AKVIVTTSRFSRQ--VTEYY---------QGIYARCGA-----RGSQLV 710 (1878)
T ss_dssp CTTCEEEEESCCTTSHHHHHHHHHHHTT---CEEEEEESSCCHH--HHHHH---------HHHHHHHCC-----TTCEEE
T ss_pred CCCCEEEEECCCCcHHHHHHHHHHHHCC---CEEEEEecCChHH--HHHHH---------HHHHHHhhc-----cCCeEE
Confidence 67899999999999 9999999999998 5777775432211 11111 111111110 125688
Q ss_pred EEeccCCCCCCCCChhhhHHHHh----------c-CccEEEEcCccCCc----------cccHHHHHHHhHHHHHHHHHH
Q 010075 89 FVPGDISSEDLGLKDSNLKEELW----------N-ELDIMVNSAAITKF----------DERYDVAFGINTLGVIHLVNF 147 (519)
Q Consensus 89 ~v~gDl~~~~lgls~~~~~~~l~----------~-~vdiViH~Aa~v~f----------~~~~~~~~~~Nv~gt~~ll~~ 147 (519)
++.+|++++ +.++.++ . .+|+|||+||.... .+.++..+++|+.|+..++++
T Consensus 711 ~v~~DVsd~-------esV~alv~~i~~~~~~~G~~IDiLVnNAGi~~~~~~l~d~t~~~e~~~~vl~vNv~g~~~l~~a 783 (1878)
T 2uv9_A 711 VVPFNQGSK-------QDVEALVNYIYDTKNGLGWDLDYVVPFAAIPENGREIDSIDSKSELAHRIMLTNLLRLLGAIKT 783 (1878)
T ss_dssp EEECCTTCH-------HHHHHHHHHHHCSSSSCCCCCSEEEECCCCCCTTCCTTCCCHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred EEEcCCCCH-------HHHHHHHHHHHHhhcccCCCCcEEEeCcccccCCCChhhcCcCHHHHHHHHHHHHHHHHHHHHH
Confidence 999999963 2223332 2 59999999997532 145778899999999999877
Q ss_pred HHhccC-----CceEEEEecceeecCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhcccccc
Q 010075 148 AKKCVK-----LKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERA 222 (519)
Q Consensus 148 a~~~~~-----l~~~V~vSTa~v~~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~ 222 (519)
++..+. ..+||++||.....
T Consensus 784 ~~~lp~M~~~~~G~IVnISS~ag~~------------------------------------------------------- 808 (1878)
T 2uv9_A 784 QKKERGYETRPAQVILPLSPNHGTF------------------------------------------------------- 808 (1878)
T ss_dssp HHHHHTCCSCCEEECCEECSCSSSS-------------------------------------------------------
T ss_pred HHHhHHHHhCCCCEEEEEcchhhcc-------------------------------------------------------
Confidence 443222 36899999964321
Q ss_pred ccCCCCcHHHHHHHHHHHHHHHh-----hcCCcEEEEecCccc
Q 010075 223 KLHGWPNTYVFTKTMGEMLMQQS-----KENLSLVIIRPTVVS 260 (519)
Q Consensus 223 ~~~~~~n~Y~~sK~~aE~lv~~~-----~~~lp~~IvRPs~V~ 260 (519)
+....|+.||+..+.+.... ...++++.+.||.|-
T Consensus 809 ---gg~~aYaASKAAL~aLt~~laAeEla~~IrVNaVaPG~V~ 848 (1878)
T 2uv9_A 809 ---GNDGLYSESKLALETLFNRWYSESWGNYLTICGAVIGWTR 848 (1878)
T ss_dssp ---SCCSSHHHHHHHHTTHHHHHHHSTTTTTEEEEEEEECCBC
T ss_pred ---CCchHHHHHHHHHHHHHHHHHHHHcCCCeEEEEEEeccee
Confidence 11246999999999886532 334899999999886
|
| >2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis} | Back alignment and structure |
|---|
Probab=99.12 E-value=5.6e-10 Score=121.80 Aligned_cols=213 Identities=14% Similarity=0.161 Sum_probs=131.5
Q ss_pred cCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCC------cccHHHHHHHHHhhhhhHHHHHhhhcccccccc
Q 010075 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAAD------IDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFI 83 (519)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~------~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~ 83 (519)
++||+++||||++.||+++++.|++.| .+|++..|+.. .....+.+.+++ ++.
T Consensus 6 l~gkvalVTGas~GIG~a~A~~la~~G---a~Vv~~~~~~~~~~~gr~~~~~~~~~~~i---------~~~--------- 64 (604)
T 2et6_A 6 FKDKVVIITGAGGGLGKYYSLEFAKLG---AKVVVNDLGGALNGQGGNSKAADVVVDEI---------VKN--------- 64 (604)
T ss_dssp CTTCEEEETTTTSHHHHHHHHHHHHTT---CEEEEECC-----------CHHHHHHHHH---------HHT---------
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHcC---CEEEEEeCCccccccccchHHHHHHHHHH---------Hhc---------
Confidence 679999999999999999999999999 67888776541 112222222111 111
Q ss_pred CCceEEEeccCCCCCCCCChhhhHHH---HhcCccEEEEcCccCCc-------cccHHHHHHHhHHHHHHHHHHHHh-c-
Q 010075 84 SEKITFVPGDISSEDLGLKDSNLKEE---LWNELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKK-C- 151 (519)
Q Consensus 84 ~~~v~~v~gDl~~~~lgls~~~~~~~---l~~~vdiViH~Aa~v~f-------~~~~~~~~~~Nv~gt~~ll~~a~~-~- 151 (519)
..+. ..|+++..- .....+. ...++|++||+||.... .+.++..+++|+.|+..+.+.+.. +
T Consensus 65 g~~~---~~d~~d~~~---~~~~v~~~~~~~G~iDiLVnNAGi~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~a~~p~m~ 138 (604)
T 2et6_A 65 GGVA---VADYNNVLD---GDKIVETAVKNFGTVHVIINNAGILRDASMKKMTEKDYKLVIDVHLNGAFAVTKAAWPYFQ 138 (604)
T ss_dssp TCEE---EEECCCTTC---HHHHHHHHHHHHSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHH
T ss_pred CCeE---EEEcCCHHH---HHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHH
Confidence 1122 246654321 1222222 34579999999997532 256888999999999988877643 2
Q ss_pred -cCCceEEEEecceeecCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcH
Q 010075 152 -VKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNT 230 (519)
Q Consensus 152 -~~l~~~V~vSTa~v~~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~ 230 (519)
++-.++|++||....... .....
T Consensus 139 ~~~~G~IVnisS~ag~~~~--------------------------------------------------------~~~~~ 162 (604)
T 2et6_A 139 KQKYGRIVNTSSPAGLYGN--------------------------------------------------------FGQAN 162 (604)
T ss_dssp HHTCEEEEEECCHHHHHCC--------------------------------------------------------TTBHH
T ss_pred HcCCCEEEEECCHHHcCCC--------------------------------------------------------CCchH
Confidence 234689999996532110 11246
Q ss_pred HHHHHHHHHHHHHHh-----hcCCcEEEEecCccccCCCCCCCcccccccccHHHHHHhhcCCceeeccCCCceeeeeeH
Q 010075 231 YVFTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPV 305 (519)
Q Consensus 231 Y~~sK~~aE~lv~~~-----~~~lp~~IvRPs~V~g~~~~p~~gw~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~d~vpV 305 (519)
|+.||+..+.+.+.. ..++.+..|-|++. . ++ .... .... ..+....
T Consensus 163 Y~asKaal~~lt~~la~El~~~gIrVn~v~Pg~~-T----~m---~~~~-~~~~-------------------~~~~~~p 214 (604)
T 2et6_A 163 YASAKSALLGFAETLAKEGAKYNIKANAIAPLAR-S----RM---TESI-MPPP-------------------MLEKLGP 214 (604)
T ss_dssp HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCC-C----HH---HHTT-SCHH-------------------HHTTCSH
T ss_pred HHHHHHHHHHHHHHHHHHhCccCeEEEEEccCCc-C----cc---cccc-CChh-------------------hhccCCH
Confidence 999999888877654 45899999999631 1 10 0000 0000 0112467
Q ss_pred HHHHHHHHHHHHHhccCCCCCcEEEecCCC
Q 010075 306 DMVVNAMIVAMVAHAKQPSDANIYHVGSSL 335 (519)
Q Consensus 306 Ddva~aii~a~~~~~~~~~~~~iyni~s~~ 335 (519)
+++|.+++.++... ..-.++++.+.+|.
T Consensus 215 e~vA~~v~~L~s~~--~~itG~~~~vdgG~ 242 (604)
T 2et6_A 215 EKVAPLVLYLSSAE--NELTGQFFEVAAGF 242 (604)
T ss_dssp HHHHHHHHHHTSSS--CCCCSCEEEEETTE
T ss_pred HHHHHHHHHHhCCc--ccCCCCEEEECCCe
Confidence 89999998887533 22246788877663
|
| >2uv8_A Fatty acid synthase subunit alpha (FAS2); fatty acid biosynthesis, malonyl/palmitoyl transferase, phosphopantetheine, transferase; HET: GVL FMN; 3.10A {Saccharomyces cerevisiae} PDB: 2vkz_A* 3hmj_A* | Back alignment and structure |
|---|
Probab=99.12 E-value=3.9e-10 Score=133.74 Aligned_cols=167 Identities=19% Similarity=0.162 Sum_probs=114.7
Q ss_pred cCCCEEEEeCCccH-HHHHHHHHHHHhCCCccEEEEEE-ecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCce
Q 010075 10 LENKTILVSGVTGF-VAKVFIEKILRVQPNVKKLYLFV-RAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKI 87 (519)
Q Consensus 10 ~~~k~VlITGaTGF-lG~~Lv~~LL~~g~~v~~V~~Lv-R~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v 87 (519)
++||+++||||+|+ ||+++++.|++.| .+|+++. |+... .+.+. +.+.++.+. ...++
T Consensus 673 l~gKvaLVTGASsGgIG~aIA~~La~~G---A~Vvl~~~R~~~~---l~~~~---------~eL~~~~~~-----~g~~v 732 (1887)
T 2uv8_A 673 FKDKYVLITGAGKGSIGAEVLQGLLQGG---AKVVVTTSRFSKQ---VTDYY---------QSIYAKYGA-----KGSTL 732 (1887)
T ss_dssp CTTCEEEEESCCSSSHHHHHHHHHHHTT---CEEEEEESSCCHH---HHHHH---------HHHHHHHCC-----TTCEE
T ss_pred CCCCEEEEECCCCcHHHHHHHHHHHHCC---CEEEEEecCCHHH---HHHHH---------HHHHHHhhc-----CCCeE
Confidence 67999999999999 9999999999998 5778774 44321 11111 112222110 02468
Q ss_pred EEEeccCCCCCCCCChhhhHHHHh------------c-CccEEEEcCccCCc----------cccHHHHHHHhHHHHHHH
Q 010075 88 TFVPGDISSEDLGLKDSNLKEELW------------N-ELDIMVNSAAITKF----------DERYDVAFGINTLGVIHL 144 (519)
Q Consensus 88 ~~v~gDl~~~~lgls~~~~~~~l~------------~-~vdiViH~Aa~v~f----------~~~~~~~~~~Nv~gt~~l 144 (519)
.++.+|++++ +..+.++ . ++|++||+||.... .+.++..+++|+.|+..+
T Consensus 733 ~~v~~DVsd~-------~sV~alv~~i~~~~~~~G~G~~LDiLVNNAGi~~~~~~l~d~t~~~e~~~~v~~vNv~g~~~l 805 (1887)
T 2uv8_A 733 IVVPFNQGSK-------QDVEALIEFIYDTEKNGGLGWDLDAIIPFAAIPEQGIELEHIDSKSEFAHRIMLTNILRMMGC 805 (1887)
T ss_dssp EEEECCTTCH-------HHHHHHHHHHHSCTTTTSCCCCCSEEEECCCCCCCSBCGGGCCHHHHHHHHHHTHHHHHHHHH
T ss_pred EEEEecCCCH-------HHHHHHHHHHHHhccccccCCCCeEEEECCCcCCCCCChhhCCcchHHHHHHHHHHHHHHHHH
Confidence 8999999963 2222322 1 59999999997532 144678899999999999
Q ss_pred HHHHHhccC-----CceEEEEecceeecCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccc
Q 010075 145 VNFAKKCVK-----LKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGT 219 (519)
Q Consensus 145 l~~a~~~~~-----l~~~V~vSTa~v~~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~ 219 (519)
++.++..+. ..+||++||......
T Consensus 806 ~~a~~~lp~m~~~~~G~IVnISS~ag~~g--------------------------------------------------- 834 (1887)
T 2uv8_A 806 VKKQKSARGIETRPAQVILPMSPNHGTFG--------------------------------------------------- 834 (1887)
T ss_dssp HHHHHHTTTCCSCCEEEEEEECSCTTCSS---------------------------------------------------
T ss_pred HHHHHhhhhhhhCCCCEEEEEcChHhccC---------------------------------------------------
Confidence 998854332 258999999643211
Q ss_pred cccccCCCCcHHHHHHHHHHHH-HHHh----hcCCcEEEEecCcccc
Q 010075 220 ERAKLHGWPNTYVFTKTMGEML-MQQS----KENLSLVIIRPTVVSG 261 (519)
Q Consensus 220 ~~~~~~~~~n~Y~~sK~~aE~l-v~~~----~~~lp~~IvRPs~V~g 261 (519)
....|+.||+..+.+ .+.. ...+.++.+.||.|-+
T Consensus 835 -------g~~aYaASKAAL~~Lttr~lA~ela~~IrVNaV~PG~V~t 874 (1887)
T 2uv8_A 835 -------GDGMYSESKLSLETLFNRWHSESWANQLTVCGAIIGWTRG 874 (1887)
T ss_dssp -------CBTTHHHHHHHGGGHHHHHHHSSCTTTEEEEEEEECCEEC
T ss_pred -------CCchHHHHHHHHHHHHHHHHHHHhCCCeEEEEEEeccccc
Confidence 124699999999988 3322 2338899999999874
|
| >3zu3_A Putative reductase YPO4104/Y4119/YP_4011; oxidoreductase, fatty acid biosynthesis II, short-chain dehydrogenase reductase superfamily; HET: NAI; 1.80A {Yersinia pestis} PDB: 3zu4_A* 3zu5_A* 3zu2_A* | Back alignment and structure |
|---|
Probab=99.08 E-value=1.9e-09 Score=110.35 Aligned_cols=182 Identities=9% Similarity=-0.062 Sum_probs=114.4
Q ss_pred cCCCEEEEeCCccHHHHHHHHHHHH-hCCCccEEEEEEecCCcccHHHHHH-HHHhhhhhHHHHHhhhccccccccCCce
Q 010075 10 LENKTILVSGVTGFVAKVFIEKILR-VQPNVKKLYLFVRAADIDSAALRFQ-NEVLAKDVFNVLKEKWGTRLNSFISEKI 87 (519)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lv~~LL~-~g~~v~~V~~LvR~~~~~~~~~rl~-~~~~~~~~f~~l~~~~~~~~~~~~~~~v 87 (519)
-.+|+++||||++.||+++++.|++ .| .+|++..|........ +. .-..+...+....++. ..++
T Consensus 45 ~~gKvaLVTGas~GIG~AiA~~LA~g~G---A~Vv~~~~~~~~~~~~--~~~~gwyn~~~~~~~~~~~--------G~~a 111 (405)
T 3zu3_A 45 NGPKRVLVIGASTGYGLAARITAAFGCG---ADTLGVFFERPGEEGK--PGTSGWYNSAAFHKFAAQK--------GLYA 111 (405)
T ss_dssp TCCSEEEEESCSSHHHHHHHHHHHHHHC---CEEEEEECCCCCBTTB--CCCHHHHHHHHHHHHHHHT--------TCCE
T ss_pred CCCCEEEEeCcchHHHHHHHHHHHHhcC---CEEEEEeCCchhhhhh--cccccchhHHHHHHHHHhc--------CCce
Confidence 3579999999999999999999999 99 6788888865442100 00 0000000011000111 2467
Q ss_pred EEEeccCCCCCCCCChhhhHHHH-------hcCccEEEEcCccC----------------Cc------------------
Q 010075 88 TFVPGDISSEDLGLKDSNLKEEL-------WNELDIMVNSAAIT----------------KF------------------ 126 (519)
Q Consensus 88 ~~v~gDl~~~~lgls~~~~~~~l-------~~~vdiViH~Aa~v----------------~f------------------ 126 (519)
..+.+|++++ +..+.+ +.++|++||+||.. .+
T Consensus 112 ~~i~~Dvtd~-------~~v~~~v~~i~~~~G~IDiLVNNAG~~~r~~p~tG~~~~s~~~pig~~~~~~~~d~~~~~~~~ 184 (405)
T 3zu3_A 112 KSINGDAFSD-------EIKQLTIDAIKQDLGQVDQVIYSLASPRRTHPKTGEVFNSALKPIGNAVNLRGLDTDKEVIKE 184 (405)
T ss_dssp EEEESCTTSH-------HHHHHHHHHHHHHTSCEEEEEECCCCSEEECTTTCCEEECCCCCSSSCEEEEEEETTTTEEEE
T ss_pred EEEECCCCCH-------HHHHHHHHHHHHHcCCCCEEEEcCccccccCcccccccccccccccccccccccccccccccc
Confidence 8899999963 222222 34799999999863 11
Q ss_pred -------cccHHHHHHHhHHHHH-HHHHHHHh--c-cCCceEEEEecceeecCcCCeeecccCCCCCCCChHHHHHHHHH
Q 010075 127 -------DERYDVAFGINTLGVI-HLVNFAKK--C-VKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQ 195 (519)
Q Consensus 127 -------~~~~~~~~~~Nv~gt~-~ll~~a~~--~-~~l~~~V~vSTa~v~~~~~~~i~E~~~~e~~~~d~~~~~~~~~~ 195 (519)
.+.++..+++|..++. .+++.+.. + .+-.++|.+||........
T Consensus 185 ~~i~~~t~ee~~~~v~Vn~~~~~~~~~~~~~~~~m~~~gG~IVniSSi~~~~~~p------------------------- 239 (405)
T 3zu3_A 185 SVLQPATQSEIDSTVAVMGGEDWQMWIDALLDAGVLAEGAQTTAFTYLGEKITHD------------------------- 239 (405)
T ss_dssp EEECCCCHHHHHHHHHHHSSHHHHHHHHHHHHHTCEEEEEEEEEEECCCCGGGTT-------------------------
T ss_pred ccCCCCCHHHHHHHHHhhchhHHHHHHHHHHHHhhhhCCcEEEEEeCchhhCcCC-------------------------
Confidence 2456777888877765 45554432 1 1124799999865321100
Q ss_pred HHhhhhhcCCChHHHHHHHhhccccccccCCCCcHHHHHHHHHHHHHHHh-----hc-CCcEEEEecCccccCCCC
Q 010075 196 KLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLMQQS-----KE-NLSLVIIRPTVVSGTYKE 265 (519)
Q Consensus 196 ~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~Y~~sK~~aE~lv~~~-----~~-~lp~~IvRPs~V~g~~~~ 265 (519)
..+..+|+.||+..+.+.+.. .. ++.+..+-||.|-.+...
T Consensus 240 -----------------------------~~~~~aY~AaKaal~~ltrsLA~Ela~~~GIRVNaVaPG~i~T~~s~ 286 (405)
T 3zu3_A 240 -----------------------------IYWNGSIGAAKKDLDQKVLAIRESLAAHGGGDARVSVLKAVVSQASS 286 (405)
T ss_dssp -----------------------------TTTTSHHHHHHHHHHHHHHHHHHHHHTTTSCEEEEEECCCCCCHHHH
T ss_pred -----------------------------CccchHHHHHHHHHHHHHHHHHHHhCcccCeEEEEEEeCCCcCchhh
Confidence 012368999999998887754 45 899999999998776543
|
| >2pff_A Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl-carrier-PR; fatty acid synthase, acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl synthase, dehydratase; 4.00A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.08 E-value=2.1e-10 Score=131.91 Aligned_cols=170 Identities=19% Similarity=0.159 Sum_probs=112.9
Q ss_pred cCCCEEEEeCCccH-HHHHHHHHHHHhCCCccEEEEE-EecCCcc-cHHHHHHHHHhhhhhHHHHHhhhccccccccCCc
Q 010075 10 LENKTILVSGVTGF-VAKVFIEKILRVQPNVKKLYLF-VRAADID-SAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEK 86 (519)
Q Consensus 10 ~~~k~VlITGaTGF-lG~~Lv~~LL~~g~~v~~V~~L-vR~~~~~-~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~ 86 (519)
++||+++||||+|+ ||+++++.|++.| .+|+++ .|+.... ...+.+ .++.+. ...+
T Consensus 474 L~GKvALVTGASgGGIGrAIAr~LA~~G---A~VVL~~~R~~e~lee~a~eL-------------~ael~a-----~Ga~ 532 (1688)
T 2pff_A 474 FKDKYVLITGAGKGSIGAEVLQGLLQGG---AKVVVTTSRFSKQVTDYYQSI-------------YAKYGA-----KGST 532 (1688)
T ss_dssp CCSCCEEECSCSSSSTHHHHHHHHHHHT---CEEEEEESSCSTTTTTHHHHT-------------TTTTCC-----TTCE
T ss_pred cCCCEEEEECCChHHHHHHHHHHHHHCc---CEEEEEeCCCHHHHHHHHHHH-------------HHHhhc-----CCCe
Confidence 67899999999998 9999999999999 577777 4543321 111111 111110 1246
Q ss_pred eEEEeccCCCCCCCCChhhhHHHHh--------c-CccEEEEcCccCCc----------cccHHHHHHHhHHHHHHHHHH
Q 010075 87 ITFVPGDISSEDLGLKDSNLKEELW--------N-ELDIMVNSAAITKF----------DERYDVAFGINTLGVIHLVNF 147 (519)
Q Consensus 87 v~~v~gDl~~~~lgls~~~~~~~l~--------~-~vdiViH~Aa~v~f----------~~~~~~~~~~Nv~gt~~ll~~ 147 (519)
+.++.+|+++++- -....+.+. . .+|++||+||.... .+.++..+++|+.|+..+++.
T Consensus 533 V~vV~~DVTD~es---VeaLVe~I~e~~~~~GfG~~IDILVNNAGI~~~g~~l~dlt~s~Ed~~rv~~VNL~G~~~Ltqa 609 (1688)
T 2pff_A 533 LIVVPFNQGSKQD---VEALIEFIYDTEKNGGLGWDLDAIIPFAAIPEQGIELEHIDSKSEFAHRIMLTNILRMMGCVKK 609 (1688)
T ss_dssp EEEEECCSSSTTH---HHHHHHHHHSCTTSSSCCCCCCEEECCCCCCCCSBCSSSCTTHHHHHHHHTTHHHHHHHHHHHH
T ss_pred EEEEEeCCCCHHH---HHHHHHHHHHhccccccCCCCeEEEECCCcCCCCCChhhCCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 8899999996431 111111221 2 59999999997532 245678899999999999998
Q ss_pred HHhccC-----CceEEEEecceeecCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhcccccc
Q 010075 148 AKKCVK-----LKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERA 222 (519)
Q Consensus 148 a~~~~~-----l~~~V~vSTa~v~~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~ 222 (519)
++..+. ..+||++||.....
T Consensus 610 a~~lp~M~krggGrIVnISSiAG~~------------------------------------------------------- 634 (1688)
T 2pff_A 610 QKSARGIETRPAQVILPMSPNHGTF------------------------------------------------------- 634 (1688)
T ss_dssp HHHHHTCTTSCEEECCCCCSCTTTS-------------------------------------------------------
T ss_pred HHhChHHHhCCCCEEEEEEChHhcc-------------------------------------------------------
Confidence 843322 25899999864321
Q ss_pred ccCCCCcHHHHHHHHHHHHHHHh-----hcCCcEEEEecCcccc
Q 010075 223 KLHGWPNTYVFTKTMGEMLMQQS-----KENLSLVIIRPTVVSG 261 (519)
Q Consensus 223 ~~~~~~n~Y~~sK~~aE~lv~~~-----~~~lp~~IvRPs~V~g 261 (519)
+....|+.||+..+.++... ...+.+..+.||.|-+
T Consensus 635 ---Gg~saYaASKAAL~aLttrsLAeEla~~IRVNaVaPG~V~T 675 (1688)
T 2pff_A 635 ---GGDGMYSESKLSLETLFNRWHSESWANQLTVCGAIIGWTRG 675 (1688)
T ss_dssp ---SCBTTHHHHHHHHTHHHHHTTTSSCTTTEECCCCCCCCCCC
T ss_pred ---CCchHHHHHHHHHHHHHHHHHHHHcCCCeEEEEEEECcCcC
Confidence 11246999999999984332 2237788888888874
|
| >3s8m_A Enoyl-ACP reductase; rossmann fold, oxidoreductase, NADH binding, fatty acid SYNT enoyl-ACP; 1.60A {Xanthomonas oryzae PV} | Back alignment and structure |
|---|
Probab=99.06 E-value=1.4e-09 Score=112.25 Aligned_cols=188 Identities=11% Similarity=-0.065 Sum_probs=112.7
Q ss_pred CCCEEEEeCCccHHHHHHHHHHHH-hCCCccEEEEEEecCCcccHHH-HHHHHHhhhhhHHHHHhhhccccccccCCceE
Q 010075 11 ENKTILVSGVTGFVAKVFIEKILR-VQPNVKKLYLFVRAADIDSAAL-RFQNEVLAKDVFNVLKEKWGTRLNSFISEKIT 88 (519)
Q Consensus 11 ~~k~VlITGaTGFlG~~Lv~~LL~-~g~~v~~V~~LvR~~~~~~~~~-rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~ 88 (519)
.+|++|||||++.||+++++.|.+ .| .+|++..|......... .. -..+...+....++. ..++.
T Consensus 60 ~gKvaLVTGASsGIG~AiA~~LA~~~G---A~Vv~~~r~~~~~~~~~~~a--g~~n~~a~~~~~~~~--------G~~a~ 126 (422)
T 3s8m_A 60 GPKKVLVIGASSGYGLASRITAAFGFG---ADTLGVFFEKPGTASKAGTA--GWYNSAAFDKHAKAA--------GLYSK 126 (422)
T ss_dssp SCSEEEEESCSSHHHHHHHHHHHHHHC---CEEEEEECCCCCCSSSCCCH--HHHHHHHHHHHHHHT--------TCCEE
T ss_pred CCCEEEEECCChHHHHHHHHHHHHhCC---CEEEEEeCCchhhhhhhccc--ccchhHHHHHHHHhc--------CCcEE
Confidence 479999999999999999999999 99 67888888764422100 00 000000010000111 24678
Q ss_pred EEeccCCCCCCCCChhhhHHHHh-cCccEEEEcCccC----------------Cc-------------------------
Q 010075 89 FVPGDISSEDLGLKDSNLKEELW-NELDIMVNSAAIT----------------KF------------------------- 126 (519)
Q Consensus 89 ~v~gDl~~~~lgls~~~~~~~l~-~~vdiViH~Aa~v----------------~f------------------------- 126 (519)
.+.+|+++++..-...+.....+ .++|++||+||.. .+
T Consensus 127 ~i~~Dvtd~~~v~~~v~~i~~~~~G~IDiLVNNAG~~~r~~p~~G~~~~~~~~p~~~~~~~~~~d~~~~~~~~~~~~~~t 206 (422)
T 3s8m_A 127 SINGDAFSDAARAQVIELIKTEMGGQVDLVVYSLASPVRKLPGSGEVKRSALKPIGQTYTATAIDTNKDTIIQASIEPAS 206 (422)
T ss_dssp EEESCTTSHHHHHHHHHHHHHHSCSCEEEEEECCCCSEEECTTTCCEEECCCCCSSSCEEEEEEETTTTEEEEEEECCCC
T ss_pred EEEecCCCHHHHHHHHHHHHHHcCCCCCEEEEcCccccccccccccccccccccccccccccccccccccccccccCCCC
Confidence 89999996321000011111234 6799999999862 11
Q ss_pred cccHHHHHHHhHHHHH-HHHHHHHhc---cCCceEEEEecceeecCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhh
Q 010075 127 DERYDVAFGINTLGVI-HLVNFAKKC---VKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKT 202 (519)
Q Consensus 127 ~~~~~~~~~~Nv~gt~-~ll~~a~~~---~~l~~~V~vSTa~v~~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~ 202 (519)
.+.++..+++|..++. .+++.+... .+-.++|.+||........
T Consensus 207 ~e~~~~~v~Vn~~~~~~~~~~a~~~~~m~~~gG~IVniSSi~g~~~~p-------------------------------- 254 (422)
T 3s8m_A 207 AQEIEDTITVMGGQDWELWIDALEGAGVLADGARSVAFSYIGTEITWP-------------------------------- 254 (422)
T ss_dssp HHHHHHHHHHHSSHHHHHHHHHHHHTTCEEEEEEEEEEEECCCGGGHH--------------------------------
T ss_pred HHHHHHHHHhhchhHHHHHHHHHHHHHHhhCCCEEEEEeCchhhccCC--------------------------------
Confidence 1345566666665554 555554321 1125799999874321100
Q ss_pred cCCChHHHHHHHhhccccccccCCCCcHHHHHHHHHHHHHHHh-----hcCCcEEEEecCccccCCCC
Q 010075 203 KGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKE 265 (519)
Q Consensus 203 ~~~~~~~~~~~~~~lg~~~~~~~~~~n~Y~~sK~~aE~lv~~~-----~~~lp~~IvRPs~V~g~~~~ 265 (519)
..+...|+.||+..+.+.+.. ..++.+..+-||.|-.+...
T Consensus 255 ----------------------~~~~~aY~ASKaAl~~lTrsLA~Ela~~GIRVNaVaPG~i~T~~~~ 300 (422)
T 3s8m_A 255 ----------------------IYWHGALGKAKVDLDRTAQRLNARLAKHGGGANVAVLKSVVTQASA 300 (422)
T ss_dssp ----------------------HHTSHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCTTGG
T ss_pred ----------------------CccchHHHHHHHHHHHHHHHHHHHhCccCEEEEEEEcCCCcChhhh
Confidence 012357999999988887754 45899999999999776543
|
| >4eue_A Putative reductase CA_C0462; TER, biofuel, synthetic biology, catalytic mechan substrate specificity, oxidoreductase; HET: NAI; 2.00A {Clostridium acetobutylicum} PDB: 4euf_A* 4euh_A* | Back alignment and structure |
|---|
Probab=98.99 E-value=5.2e-09 Score=108.58 Aligned_cols=177 Identities=9% Similarity=-0.068 Sum_probs=111.2
Q ss_pred cCCCEEEEeCCccHHHHH--HHHHHHHhCCCccEEEEEEecCCcccH---------HHHHHHHHhhhhhHHHHHhhhccc
Q 010075 10 LENKTILVSGVTGFVAKV--FIEKILRVQPNVKKLYLFVRAADIDSA---------ALRFQNEVLAKDVFNVLKEKWGTR 78 (519)
Q Consensus 10 ~~~k~VlITGaTGFlG~~--Lv~~LL~~g~~v~~V~~LvR~~~~~~~---------~~rl~~~~~~~~~f~~l~~~~~~~ 78 (519)
..||+++||||++.||.+ +++.|.+.| .+|+++.|++..... .+.+. .+.++.
T Consensus 58 ~~gK~aLVTGassGIG~A~aia~ala~~G---a~Vi~~~r~~~~~~~~~~~~~~~~~~~~~----------~~~~~~--- 121 (418)
T 4eue_A 58 RGPKKVLIVGASSGFGLATRISVAFGGPE---AHTIGVSYETGATDRRIGTAGWYNNIFFK----------EFAKKK--- 121 (418)
T ss_dssp CCCSEEEEESCSSHHHHHHHHHHHHSSSC---CEEEEEECCCCCCSSCCCCHHHHHHHHHH----------HHHHHT---
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHHhCC---CEEEEEecCcchhhhcccccccchHHHHH----------HHHHHc---
Confidence 578999999999999999 999998888 688888887644210 12222 111111
Q ss_pred cccccCCceEEEeccCCCCCCCCChhhhHHHH---hcCccEEEEcCccC----------------Cc-------------
Q 010075 79 LNSFISEKITFVPGDISSEDLGLKDSNLKEEL---WNELDIMVNSAAIT----------------KF------------- 126 (519)
Q Consensus 79 ~~~~~~~~v~~v~gDl~~~~lgls~~~~~~~l---~~~vdiViH~Aa~v----------------~f------------- 126 (519)
..++..+.+|+++++. -....+.+ ..++|++||+||.. .+
T Consensus 122 -----g~~~~~~~~Dvtd~~~---v~~~v~~i~~~~G~IDiLVnNAG~~~r~~~~~g~~~~s~~~p~~~~~~~~~~d~~~ 193 (418)
T 4eue_A 122 -----GLVAKNFIEDAFSNET---KDKVIKYIKDEFGKIDLFVYSLAAPRRKDYKTGNVYTSRIKTILGDFEGPTIDVER 193 (418)
T ss_dssp -----TCCEEEEESCTTCHHH---HHHHHHHHHHTTCCEEEEEECCCCSEEECTTTCCEEECCCCBSSSCEEEEEEETTT
T ss_pred -----CCcEEEEEeeCCCHHH---HHHHHHHHHHHcCCCCEEEECCcccccccccccccccccccccccccccccccccc
Confidence 2568899999996321 01111112 24699999999873 01
Q ss_pred ------------cccHHHHHHHhHHHHH-HHHHHHHhc---cCCceEEEEecceeecCcCCeeecccCCCCCCCChHHHH
Q 010075 127 ------------DERYDVAFGINTLGVI-HLVNFAKKC---VKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEM 190 (519)
Q Consensus 127 ------------~~~~~~~~~~Nv~gt~-~ll~~a~~~---~~l~~~V~vSTa~v~~~~~~~i~E~~~~e~~~~d~~~~~ 190 (519)
.+.++..+++|..+.. .+++.+... .+-.++|.+||...... .+
T Consensus 194 ~~~~~~~~~~~t~e~~~~~~~vn~~~~~~~~~~~l~~~~~~~~gg~IV~iSSi~~~~~---------~p----------- 253 (418)
T 4eue_A 194 DEITLKKVSSASIEEIEETRKVMGGEDWQEWCEELLYEDCFSDKATTIAYSYIGSPRT---------YK----------- 253 (418)
T ss_dssp TEEEEEEECBCCHHHHHHHHHHHSSHHHHHHHHHHHHTTCEEEEEEEEEEECCCCGGG---------TT-----------
T ss_pred cccccccccCCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhhcCCcEEEEEeCchhcCC---------CC-----------
Confidence 1345555666655554 444444321 11246888888642210 00
Q ss_pred HHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcHHHHHHHHHHHHHHHh-----h-cCCcEEEEecCccccCCC
Q 010075 191 KVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLMQQS-----K-ENLSLVIIRPTVVSGTYK 264 (519)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~Y~~sK~~aE~lv~~~-----~-~~lp~~IvRPs~V~g~~~ 264 (519)
..+...|+.||+..+.+.+.. . .++.+..+-||.|-.+..
T Consensus 254 ----------------------------------~~~~~aY~ASKaAL~~ltrsLA~ELa~~~GIrVN~V~PG~v~T~~s 299 (418)
T 4eue_A 254 ----------------------------------IYREGTIGIAKKDLEDKAKLINEKLNRVIGGRAFVSVNKALVTKAS 299 (418)
T ss_dssp ----------------------------------TTTTSHHHHHHHHHHHHHHHHHHHHHHHHSCEEEEEECCCCCCHHH
T ss_pred ----------------------------------ccccHHHHHHHHHHHHHHHHHHHHhCCccCeEEEEEECCcCcChhh
Confidence 012368999999988887654 4 589999999999877544
|
| >2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A* | Back alignment and structure |
|---|
Probab=98.88 E-value=1e-08 Score=127.45 Aligned_cols=171 Identities=15% Similarity=0.149 Sum_probs=116.9
Q ss_pred hcCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceE
Q 010075 9 FLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKIT 88 (519)
Q Consensus 9 ~~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~ 88 (519)
|-.+|+++||||+|.||+.+++.|++.|. +.|+++.|+.......+...++ +++. ..++.
T Consensus 1881 ~~~~k~~lITGgs~GIG~aia~~la~~Ga--~~vvl~~R~~~~~~~~~~~~~~---------l~~~---------g~~v~ 1940 (2512)
T 2vz8_A 1881 CPPHKSYVITGGLGGFGLQLAQWLRLRGA--QKLVLTSRSGIRTGYQARQVRE---------WRRQ---------GVQVL 1940 (2512)
T ss_dssp CCTTCEEEEESTTSHHHHHHHHHHHHTTC--CEEEEECSSCCCSHHHHHHHHH---------HHHT---------TCEEE
T ss_pred cCCCCEEEEECCCCCHHHHHHHHHHHCCC--CEEEEEeCCCcchHHHHHHHHH---------HHhC---------CCEEE
Confidence 44789999999999999999999999884 3478888886543322222111 1111 25688
Q ss_pred EEeccCCCCCCCCChhhhHHHH------hcCccEEEEcCccCCc-------cccHHHHHHHhHHHHHHHHHHHHh-ccCC
Q 010075 89 FVPGDISSEDLGLKDSNLKEEL------WNELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKK-CVKL 154 (519)
Q Consensus 89 ~v~gDl~~~~lgls~~~~~~~l------~~~vdiViH~Aa~v~f-------~~~~~~~~~~Nv~gt~~ll~~a~~-~~~l 154 (519)
++.+|++++ +..+.+ ...+|+|||+|+.... .+.++..+++|+.|+.++.+++.. ++..
T Consensus 1941 ~~~~Dvsd~-------~~v~~~~~~~~~~g~id~lVnnAgv~~~~~~~~~t~e~~~~~~~~nv~g~~~l~~~~~~~~~~~ 2013 (2512)
T 2vz8_A 1941 VSTSNASSL-------DGARSLITEATQLGPVGGVFNLAMVLRDAVLENQTPEFFQDVSKPKYSGTANLDRVTREACPEL 2013 (2512)
T ss_dssp EECCCSSSH-------HHHHHHHHHHHHHSCEEEEEECCCC----------------CTTTTHHHHHHHHHHHHHHCTTC
T ss_pred EEecCCCCH-------HHHHHHHHHHHhcCCCcEEEECCCcCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHHHHhcccC
Confidence 999999963 222232 2469999999997532 256777799999999999888764 3456
Q ss_pred ceEEEEecceeecCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcHHHHH
Q 010075 155 KVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFT 234 (519)
Q Consensus 155 ~~~V~vSTa~v~~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~Y~~s 234 (519)
.+||++||....... .....|+.+
T Consensus 2014 g~iV~iSS~ag~~g~--------------------------------------------------------~g~~~Y~aa 2037 (2512)
T 2vz8_A 2014 DYFVIFSSVSCGRGN--------------------------------------------------------AGQANYGFA 2037 (2512)
T ss_dssp CEEEEECCHHHHTTC--------------------------------------------------------TTCHHHHHH
T ss_pred CEEEEecchhhcCCC--------------------------------------------------------CCcHHHHHH
Confidence 899999997543211 112469999
Q ss_pred HHHHHHHHHHh-hcCCcEEEEecCccccC
Q 010075 235 KTMGEMLMQQS-KENLSLVIIRPTVVSGT 262 (519)
Q Consensus 235 K~~aE~lv~~~-~~~lp~~IvRPs~V~g~ 262 (519)
|+..+.+.+.. ..|+|...+..+.+.+.
T Consensus 2038 Kaal~~l~~~rr~~Gl~~~a~~~g~~~~~ 2066 (2512)
T 2vz8_A 2038 NSAMERICEKRRHDGLPGLAVQWGAIGDV 2066 (2512)
T ss_dssp HHHHHHHHHHHHHTTSCCCEEEECCBCTT
T ss_pred HHHHHHHHHHHHHCCCcEEEEEccCcCCc
Confidence 99999999865 56899888887766543
|
| >3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi} | Back alignment and structure |
|---|
Probab=98.45 E-value=5.4e-07 Score=75.72 Aligned_cols=94 Identities=11% Similarity=0.037 Sum_probs=66.7
Q ss_pred CCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEEe
Q 010075 12 NKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVP 91 (519)
Q Consensus 12 ~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v~ 91 (519)
+++|+|+|+ |++|+.+++.|++.|. .+|+++.|+... .+.+. ..++..+.
T Consensus 5 ~~~v~I~G~-G~iG~~~~~~l~~~g~--~~v~~~~r~~~~---~~~~~------------------------~~~~~~~~ 54 (118)
T 3ic5_A 5 RWNICVVGA-GKIGQMIAALLKTSSN--YSVTVADHDLAA---LAVLN------------------------RMGVATKQ 54 (118)
T ss_dssp CEEEEEECC-SHHHHHHHHHHHHCSS--EEEEEEESCHHH---HHHHH------------------------TTTCEEEE
T ss_pred cCeEEEECC-CHHHHHHHHHHHhCCC--ceEEEEeCCHHH---HHHHH------------------------hCCCcEEE
Confidence 579999999 9999999999999762 578888886321 11111 14567889
Q ss_pred ccCCCCCCCCChhhhHHHHhcCccEEEEcCccCCccccHHHHHHHhHHHHHHHHHHHHhccCCceEE
Q 010075 92 GDISSEDLGLKDSNLKEELWNELDIMVNSAAITKFDERYDVAFGINTLGVIHLVNFAKKCVKLKVFV 158 (519)
Q Consensus 92 gDl~~~~lgls~~~~~~~l~~~vdiViH~Aa~v~f~~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V 158 (519)
+|+.+ .+.....++++|+|||+++.. .+..+++.|.+. +.+.|.
T Consensus 55 ~d~~~-------~~~~~~~~~~~d~vi~~~~~~---------------~~~~~~~~~~~~-g~~~~~ 98 (118)
T 3ic5_A 55 VDAKD-------EAGLAKALGGFDAVISAAPFF---------------LTPIIAKAAKAA-GAHYFD 98 (118)
T ss_dssp CCTTC-------HHHHHHHTTTCSEEEECSCGG---------------GHHHHHHHHHHT-TCEEEC
T ss_pred ecCCC-------HHHHHHHHcCCCEEEECCCch---------------hhHHHHHHHHHh-CCCEEE
Confidence 99984 343457778999999999631 135677788775 665553
|
| >1hye_A L-lactate/malate dehydrogenase; nucleotide binding domain, oxidoreductase; HET: NAP; 1.90A {Methanocaldococcus jannaschii} SCOP: c.2.1.5 d.162.1.1 PDB: 1hyg_A* | Back alignment and structure |
|---|
Probab=98.43 E-value=1.7e-06 Score=86.51 Aligned_cols=122 Identities=11% Similarity=0.059 Sum_probs=76.7
Q ss_pred CEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEEec
Q 010075 13 KTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVPG 92 (519)
Q Consensus 13 k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v~g 92 (519)
++|+||||+||+|+.++..|+..+. +.++.++.++.... ..+....++.+. .+ +....+.+..+
T Consensus 1 mKI~V~GaaG~vG~~l~~~L~~~~~-~~el~L~Di~~~~~-~~~~~~~dl~~~---------~~-----~~~~~~~i~~~ 64 (313)
T 1hye_A 1 MKVTIIGASGRVGSATALLLAKEPF-MKDLVLIGREHSIN-KLEGLREDIYDA---------LA-----GTRSDANIYVE 64 (313)
T ss_dssp CEEEEETTTSHHHHHHHHHHHTCTT-CCEEEEEECGGGHH-HHHHHHHHHHHH---------HT-----TSCCCCEEEEE
T ss_pred CEEEEECCCChhHHHHHHHHHhCCC-CCEEEEEcCCCchh-hhHHHHHHHHHh---------HH-----hcCCCeEEEeC
Confidence 4799999999999999999998653 34676666632211 011100011000 00 00112232222
Q ss_pred cCCCCCCCCChhhhHHHHhcCccEEEEcCccCCc-cccHHHHHHHhHHHHHHHHHHHHhccCCceEEEEecc
Q 010075 93 DISSEDLGLKDSNLKEELWNELDIMVNSAAITKF-DERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTA 163 (519)
Q Consensus 93 Dl~~~~lgls~~~~~~~l~~~vdiViH~Aa~v~f-~~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V~vSTa 163 (519)
| .+. ...++++|+|||+||..+- .......+..|+.+++++++.+++. . +++++++|-
T Consensus 65 ~----------d~l-~~al~gaD~Vi~~Ag~~~~~g~~r~dl~~~N~~i~~~i~~~i~~~-~-~~~vlv~SN 123 (313)
T 1hye_A 65 S----------DEN-LRIIDESDVVIITSGVPRKEGMSRMDLAKTNAKIVGKYAKKIAEI-C-DTKIFVITN 123 (313)
T ss_dssp E----------TTC-GGGGTTCSEEEECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHH-C-CCEEEECSS
T ss_pred C----------cch-HHHhCCCCEEEECCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHh-C-CeEEEEecC
Confidence 2 011 1456789999999997643 3455677999999999999999997 5 888888873
|
| >1smk_A Malate dehydrogenase, glyoxysomal; tricarboxylic cycle, glyoxysome, NAD, glyoxylate bypass, oxidoreductase; HET: CIT; 2.50A {Citrullus lanatus} PDB: 1sev_A | Back alignment and structure |
|---|
Probab=98.41 E-value=8e-07 Score=89.42 Aligned_cols=118 Identities=16% Similarity=0.148 Sum_probs=77.6
Q ss_pred CCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEEe
Q 010075 12 NKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVP 91 (519)
Q Consensus 12 ~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v~ 91 (519)
.++|+||||+||+|..++..|+..+. +.+|.++.+... ......+. +. ....++..+.
T Consensus 8 ~mKI~ViGAaG~VG~~la~~L~~~g~-~~ev~l~Di~~~-~~~~~dL~----~~----------------~~~~~v~~~~ 65 (326)
T 1smk_A 8 GFKVAILGAAGGIGQPLAMLMKMNPL-VSVLHLYDVVNA-PGVTADIS----HM----------------DTGAVVRGFL 65 (326)
T ss_dssp CEEEEEETTTSTTHHHHHHHHHHCTT-EEEEEEEESSSH-HHHHHHHH----TS----------------CSSCEEEEEE
T ss_pred CCEEEEECCCChHHHHHHHHHHhCCC-CCEEEEEeCCCc-HhHHHHhh----cc----------------cccceEEEEe
Confidence 46899999999999999999988653 457777765542 10001111 00 0001222211
Q ss_pred ccCCCCCCCCChhhhHHHHhcCccEEEEcCccCCc-cccHHHHHHHhHHHHHHHHHHHHhccCCceEEEEecc
Q 010075 92 GDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF-DERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTA 163 (519)
Q Consensus 92 gDl~~~~lgls~~~~~~~l~~~vdiViH~Aa~v~f-~~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V~vSTa 163 (519)
+ ..+. ...+++.|+|||+|+...- ..........|+.+++++++.+.+. +.+.+|+++|-
T Consensus 66 ~----------t~d~-~~al~gaDvVi~~ag~~~~~g~~r~dl~~~N~~~~~~i~~~i~~~-~p~~~viv~SN 126 (326)
T 1smk_A 66 G----------QQQL-EAALTGMDLIIVPAGVPRKPGMTRDDLFKINAGIVKTLCEGIAKC-CPRAIVNLISN 126 (326)
T ss_dssp S----------HHHH-HHHHTTCSEEEECCCCCCCSSCCCSHHHHHHHHHHHHHHHHHHHH-CTTSEEEECCS
T ss_pred C----------CCCH-HHHcCCCCEEEEcCCcCCCCCCCHHHHHHHHHHHHHHHHHHHHhh-CCCeEEEEECC
Confidence 1 2233 3567899999999997642 3334566899999999999999986 57788888763
|
| >3zen_D Fatty acid synthase; transferase, mycolic acid biosynthesis, multifunctional ENZY substrate channeling; HET: FMN; 7.50A {Mycobacterium smegmatis} PDB: 4b3y_A* | Back alignment and structure |
|---|
Probab=98.41 E-value=2.9e-06 Score=105.89 Aligned_cols=115 Identities=16% Similarity=0.190 Sum_probs=78.0
Q ss_pred cCCCEEEEeCCccH-HHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceE
Q 010075 10 LENKTILVSGVTGF-VAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKIT 88 (519)
Q Consensus 10 ~~~k~VlITGaTGF-lG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~ 88 (519)
++||+++||||++. ||+++++.|++.| .+|++..|+..... .+.++ .+.++.+. ...++.
T Consensus 2134 l~gKvaLVTGAs~GsIG~AiA~~La~~G---A~Vvi~~r~~~~~~-~~~~~----------~l~~~l~~-----~G~~~~ 2194 (3089)
T 3zen_D 2134 XXDEVAVVTGASKGSIAASVVGQLLDGG---ATVIATTSRLDDDR-LAFYK----------QLYRDHAR-----FDATLW 2194 (3089)
T ss_dssp CCCCEEEEESCCTTSHHHHHHHHHHHTT---CEEEEEESCCSHHH-HHHHH----------HHHHHHCC-----TTCEEE
T ss_pred CCCCEEEEeCCChhHHHHHHHHHHHHCC---CEEEEEeCChhhhh-hHHHH----------HHHHHHhh-----cCCeEE
Confidence 78999999999999 9999999999999 68888888754311 11111 11122111 124678
Q ss_pred EEeccCCCCCCCCChhhhHHHH----h-------cCccEEEEcCcc----CC------------ccccHHHHHHHhHHHH
Q 010075 89 FVPGDISSEDLGLKDSNLKEEL----W-------NELDIMVNSAAI----TK------------FDERYDVAFGINTLGV 141 (519)
Q Consensus 89 ~v~gDl~~~~lgls~~~~~~~l----~-------~~vdiViH~Aa~----v~------------f~~~~~~~~~~Nv~gt 141 (519)
.+.+|++++ ++ .+.+ . .++|++||+||. .. ++...+..+++|+.++
T Consensus 2195 ~v~~Dvtd~------~~-v~~lv~~i~~~~~~~fG~IDILVNNAGi~d~~~~~a~~~~~~~~e~~~~~~e~~~~vnl~~~ 2267 (3089)
T 3zen_D 2195 VVPANMASY------SD-IDKLVEWVGTEQTESLGPQSIHLKDAQTPTLLFPFAAPRVAGDMSEVGSRAEMEMKVLLWAV 2267 (3089)
T ss_dssp EEECCTTCH------HH-HHHHHHHHTSCCEEEESSSEEEECCCCCCSEEEECCCCCCCCTTSCTTSHHHHHHHHHTHHH
T ss_pred EEEecCCCH------HH-HHHHHHHHHhhhhhhcCCCCEEEECCCcccccCcccccccCCCHHHHHHHHHHHHHHHHHHH
Confidence 899999963 22 2232 2 358999999997 11 1123455589999999
Q ss_pred HHHHHHHHh
Q 010075 142 IHLVNFAKK 150 (519)
Q Consensus 142 ~~ll~~a~~ 150 (519)
..+++.+..
T Consensus 2268 ~~l~~~~~~ 2276 (3089)
T 3zen_D 2268 QRLISGLSK 2276 (3089)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 888877654
|
| >1b8p_A Protein (malate dehydrogenase); oxidoreductase; 1.90A {Aquaspirillum arcticum} SCOP: c.2.1.5 d.162.1.1 PDB: 1b8u_A* 1b8v_A* 3d5t_A | Back alignment and structure |
|---|
Probab=98.35 E-value=6.9e-07 Score=90.06 Aligned_cols=124 Identities=10% Similarity=0.060 Sum_probs=76.7
Q ss_pred CCEEEEeCCccHHHHHHHHHHHHhCC----CccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCce
Q 010075 12 NKTILVSGVTGFVAKVFIEKILRVQP----NVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKI 87 (519)
Q Consensus 12 ~k~VlITGaTGFlG~~Lv~~LL~~g~----~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v 87 (519)
.++|+||||+||+|++++..|+..+. .+.+|.++.+.... ..+++.....+ +... ...+
T Consensus 5 ~~KI~ViGaaG~VG~~l~~~L~~~~~~~~~~~~ev~l~Di~~~~--~~~~~~g~~~d------l~~~---------~~~~ 67 (329)
T 1b8p_A 5 PMRVAVTGAAGQICYSLLFRIANGDMLGKDQPVILQLLEIPNEK--AQKALQGVMME------IDDC---------AFPL 67 (329)
T ss_dssp CEEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCSCHH--HHHHHHHHHHH------HHTT---------TCTT
T ss_pred CCEEEEECCCChHHHHHHHHHHhCCCcCCCCCCEEEEEcCCCcc--ccccchhhHHH------Hhhh---------cccc
Confidence 46899999999999999999988652 11367776554100 01111100000 0000 0011
Q ss_pred EEEeccCCCCCCCCChhhhHHHHhcCccEEEEcCccCCc-cccHHHHHHHhHHHHHHHHHHHHhccCCc-eEEEEec
Q 010075 88 TFVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF-DERYDVAFGINTLGVIHLVNFAKKCVKLK-VFVHVST 162 (519)
Q Consensus 88 ~~v~gDl~~~~lgls~~~~~~~l~~~vdiViH~Aa~v~f-~~~~~~~~~~Nv~gt~~ll~~a~~~~~l~-~~V~vST 162 (519)
.+|+.. ..+. ...+++.|+|||+||..+- .......+..|+.+++++++.+.+..+.+ +|+++|.
T Consensus 68 ---~~~i~~------~~~~-~~al~~aD~Vi~~ag~~~~~g~~r~dl~~~N~~i~~~i~~~i~~~~~p~a~ii~~SN 134 (329)
T 1b8p_A 68 ---LAGMTA------HADP-MTAFKDADVALLVGARPRGPGMERKDLLEANAQIFTVQGKAIDAVASRNIKVLVVGN 134 (329)
T ss_dssp ---EEEEEE------ESSH-HHHTTTCSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECSS
T ss_pred ---cCcEEE------ecCc-HHHhCCCCEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEccC
Confidence 134431 1222 3567899999999997653 34566778999999999999999873244 7888775
|
| >1o6z_A MDH, malate dehydrogenase; halophilic, ION-binding, protein-solvent interaction, oxidoreductase; HET: NAD; 1.95A {Haloarcula marismortui} SCOP: c.2.1.5 d.162.1.1 PDB: 1gt2_A* 2x0r_A* 2j5k_A 2j5q_A 2j5r_A 1d3a_A 1hlp_A* 2hlp_A | Back alignment and structure |
|---|
Probab=98.33 E-value=5.4e-06 Score=82.45 Aligned_cols=119 Identities=11% Similarity=-0.025 Sum_probs=76.8
Q ss_pred CEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEEec
Q 010075 13 KTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVPG 92 (519)
Q Consensus 13 k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v~g 92 (519)
++|+||||+||+|..++..|+..+. +.++.++.++... ++++.... -+..... ....+.+..+
T Consensus 1 mKI~IiGAaG~vG~~l~~~L~~~~~-~~el~L~Di~~~~----~~~~~~~~------dl~~~~~------~~~~~~v~~~ 63 (303)
T 1o6z_A 1 TKVSVVGAAGTVGAAAGYNIALRDI-ADEVVFVDIPDKE----DDTVGQAA------DTNHGIA------YDSNTRVRQG 63 (303)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTC-CSEEEEECCGGGH----HHHHHHHH------HHHHHHT------TTCCCEEEEC
T ss_pred CEEEEECCCChHHHHHHHHHHhCCC-CCEEEEEcCCCCh----hhHHHHHH------HHHHHHh------hCCCcEEEeC
Confidence 5899999999999999999988653 3467777662111 11111000 0110000 0123333332
Q ss_pred cCCCCCCCCChhhhHHHHhcCccEEEEcCccCCc-cccHHHHHHHhHHHHHHHHHHHHhccCCceEEEEecc
Q 010075 93 DISSEDLGLKDSNLKEELWNELDIMVNSAAITKF-DERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTA 163 (519)
Q Consensus 93 Dl~~~~lgls~~~~~~~l~~~vdiViH~Aa~v~f-~~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V~vSTa 163 (519)
| ...+++.|+|||+|+..+- .......+..|+.+++++++.+++. +.+.+++++|-
T Consensus 64 ~--------------~~a~~~aDvVi~~ag~~~~~g~~r~dl~~~N~~i~~~i~~~i~~~-~p~~~viv~SN 120 (303)
T 1o6z_A 64 G--------------YEDTAGSDVVVITAGIPRQPGQTRIDLAGDNAPIMEDIQSSLDEH-NDDYISLTTSN 120 (303)
T ss_dssp C--------------GGGGTTCSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHTT-CSCCEEEECCS
T ss_pred C--------------HHHhCCCCEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH-CCCcEEEEeCC
Confidence 2 1335789999999997643 3455667899999999999999997 67888888763
|
| >1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A* | Back alignment and structure |
|---|
Probab=98.18 E-value=1.9e-06 Score=84.98 Aligned_cols=83 Identities=16% Similarity=0.143 Sum_probs=59.0
Q ss_pred cCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 010075 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (519)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (519)
++||+++||||+|++|++++..|++.| .+|++..|+... .+.+.++ +... .++.+
T Consensus 117 l~gk~vlVtGaaGGiG~aia~~L~~~G---~~V~i~~R~~~~---~~~l~~~---------~~~~----------~~~~~ 171 (287)
T 1lu9_A 117 VKGKKAVVLAGTGPVGMRSAALLAGEG---AEVVLCGRKLDK---AQAAADS---------VNKR----------FKVNV 171 (287)
T ss_dssp CTTCEEEEETCSSHHHHHHHHHHHHTT---CEEEEEESSHHH---HHHHHHH---------HHHH----------HTCCC
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCc---CEEEEEECCHHH---HHHHHHH---------HHhc----------CCcEE
Confidence 578999999999999999999999988 468888886321 1222211 1110 13456
Q ss_pred EeccCCCCCCCCChhhhHHHHhcCccEEEEcCccC
Q 010075 90 VPGDISSEDLGLKDSNLKEELWNELDIMVNSAAIT 124 (519)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~~~vdiViH~Aa~v 124 (519)
+.+|+++ .+..+.+++++|+|||+|+..
T Consensus 172 ~~~D~~~-------~~~~~~~~~~~DvlVn~ag~g 199 (287)
T 1lu9_A 172 TAAETAD-------DASRAEAVKGAHFVFTAGAIG 199 (287)
T ss_dssp EEEECCS-------HHHHHHHTTTCSEEEECCCTT
T ss_pred EEecCCC-------HHHHHHHHHhCCEEEECCCcc
Confidence 7889984 333457778899999999853
|
| >1ff9_A Saccharopine reductase; lysine biosynthesis, alpha-aminoadipate pathway, dehydrogenase, oxidoreductase; 2.00A {Magnaporthe grisea} SCOP: c.2.1.3 d.81.1.2 PDB: 1e5l_A* 1e5q_A | Back alignment and structure |
|---|
Probab=97.97 E-value=7.2e-06 Score=86.08 Aligned_cols=109 Identities=15% Similarity=0.213 Sum_probs=69.5
Q ss_pred cCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 010075 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (519)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (519)
|++++|+||| +|++|+++++.|++.| .+|++..|+.. +.+ ++ .++ ...+..
T Consensus 1 M~~k~VlViG-aG~iG~~ia~~L~~~G---~~V~v~~R~~~------~a~-~l---------a~~---------~~~~~~ 51 (450)
T 1ff9_A 1 MATKSVLMLG-SGFVTRPTLDVLTDSG---IKVTVACRTLE------SAK-KL---------SAG---------VQHSTP 51 (450)
T ss_dssp -CCCEEEEEC-CSTTHHHHHHHHHTTT---CEEEEEESSHH------HHH-HT---------TTT---------CTTEEE
T ss_pred CCCCEEEEEC-CCHHHHHHHHHHHhCc---CEEEEEECCHH------HHH-HH---------HHh---------cCCceE
Confidence 3578999998 8999999999999877 57888888631 111 00 000 124678
Q ss_pred EeccCCCCCCCCChhhhHHHHhcCccEEEEcCccCCccccHHHHHHH--h-------HHHHHHHHHHHHhccCCc
Q 010075 90 VPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKFDERYDVAFGI--N-------TLGVIHLVNFAKKCVKLK 155 (519)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~~~vdiViH~Aa~v~f~~~~~~~~~~--N-------v~gt~~ll~~a~~~~~l~ 155 (519)
+.+|+++ .+....+++++|+|||+|+......-...+++. | ..++.++++.|++. +++
T Consensus 52 ~~~Dv~d-------~~~l~~~l~~~DvVIn~a~~~~~~~i~~a~l~~g~~vvd~~~~~~~~~~l~~aA~~a-Gv~ 118 (450)
T 1ff9_A 52 ISLDVND-------DAALDAEVAKHDLVISLIPYTFHATVIKSAIRQKKHVVTTSYVSPAMMELDQAAKDA-GIT 118 (450)
T ss_dssp EECCTTC-------HHHHHHHHTTSSEEEECCC--CHHHHHHHHHHHTCEEEESSCCCHHHHHTHHHHHHT-TCE
T ss_pred EEeecCC-------HHHHHHHHcCCcEEEECCccccchHHHHHHHhCCCeEEEeecccHHHHHHHHHHHHC-CCe
Confidence 8899984 333346678999999999864321111222222 2 23678888988885 543
|
| >2gk4_A Conserved hypothetical protein; alpha-beta-alpha sandwich, flavoprotein, structural genomics protein structure initiative; 1.83A {Streptococcus pneumoniae} | Back alignment and structure |
|---|
Probab=97.89 E-value=2.3e-05 Score=74.34 Aligned_cols=78 Identities=17% Similarity=0.268 Sum_probs=54.3
Q ss_pred CCCEEEEeCC----------------ccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhh
Q 010075 11 ENKTILVSGV----------------TGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEK 74 (519)
Q Consensus 11 ~~k~VlITGa----------------TGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~ 74 (519)
+||+|||||| ||.+|.++++.+++.| .+|+++.|+..-..
T Consensus 2 ~gk~vlVTgG~T~E~IDpVR~ItN~SSG~mG~aiA~~~~~~G---a~V~lv~~~~~~~~--------------------- 57 (232)
T 2gk4_A 2 NAMKILVTSGGTSEAIDSVRSITNHSTGHLGKIITETLLSAG---YEVCLITTKRALKP--------------------- 57 (232)
T ss_dssp -CCEEEEECSBCEEESSSSEEEEECCCCHHHHHHHHHHHHTT---CEEEEEECTTSCCC---------------------
T ss_pred CCCEEEEeCCCcccccCceeeccCCCCCHHHHHHHHHHHHCC---CEEEEEeCCccccc---------------------
Confidence 5899999999 9999999999999999 67888888753210
Q ss_pred hccccccccCCceEEEeccCCCCCCCCChhhhHH---HHhcCccEEEEcCccCCcc
Q 010075 75 WGTRLNSFISEKITFVPGDISSEDLGLKDSNLKE---ELWNELDIMVNSAAITKFD 127 (519)
Q Consensus 75 ~~~~~~~~~~~~v~~v~gDl~~~~lgls~~~~~~---~l~~~vdiViH~Aa~v~f~ 127 (519)
.....+..+..+- ..+... ..+.++|++||+||...|.
T Consensus 58 -------~~~~~~~~~~v~s--------~~em~~~v~~~~~~~Dili~aAAvsD~~ 98 (232)
T 2gk4_A 58 -------EPHPNLSIREITN--------TKDLLIEMQERVQDYQVLIHSMAVSDYT 98 (232)
T ss_dssp -------CCCTTEEEEECCS--------HHHHHHHHHHHGGGCSEEEECSBCCSEE
T ss_pred -------cCCCCeEEEEHhH--------HHHHHHHHHHhcCCCCEEEEcCcccccc
Confidence 0012444444331 333332 3346799999999987764
|
| >4ggo_A Trans-2-enoyl-COA reductase; rossmann fold, oxidoreductase; 2.00A {Treponema denticola atcc 35405} PDB: 4ggp_A | Back alignment and structure |
|---|
Probab=97.82 E-value=0.00028 Score=71.62 Aligned_cols=96 Identities=14% Similarity=0.014 Sum_probs=59.1
Q ss_pred cCCCEEEEeCCccHHHHHHHHHHH-HhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceE
Q 010075 10 LENKTILVSGVTGFVAKVFIEKIL-RVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKIT 88 (519)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lv~~LL-~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~ 88 (519)
..+|++|||||+..+|.+....|. +.| ..++++.|.+........-. ...+...|....++. ..+..
T Consensus 48 ~~pK~vLVtGaSsGiGlA~AialAf~~G---A~vi~v~~~~~~~~~~~ata-g~~~~~a~~~~i~~~--------G~~a~ 115 (401)
T 4ggo_A 48 KAPKNVLVLGCSNGYGLASRITAAFGYG---AATIGVSFEKAGSETKYGTP-GWYNNLAFDEAAKRE--------GLYSV 115 (401)
T ss_dssp CCCCEEEEESCSSHHHHHHHHHHHHHHC---CEEEEEECCCCCCSSSCCCH-HHHHHHHHHHHHHHH--------TCCEE
T ss_pred CCCCEEEEECCCCcHHHHHHHHHHhhCC---CCEEEEecCCcccccccccc-cchhHHHHHHHHHHc--------CCCce
Confidence 457999999999999999999987 667 56777777654321000000 000011122222222 25678
Q ss_pred EEeccCCCCCCCCChhhhHHHH-------hcCccEEEEcCccC
Q 010075 89 FVPGDISSEDLGLKDSNLKEEL-------WNELDIMVNSAAIT 124 (519)
Q Consensus 89 ~v~gDl~~~~lgls~~~~~~~l-------~~~vdiViH~Aa~v 124 (519)
.+.+|++++ +..+.+ ..++|++||++|..
T Consensus 116 ~i~~Dv~d~-------e~i~~vi~~i~~~~G~IDiLVhS~A~~ 151 (401)
T 4ggo_A 116 TIDGDAFSD-------EIKAQVIEEAKKKGIKFDLIVYSLASP 151 (401)
T ss_dssp EEESCTTSH-------HHHHHHHHHHHHTTCCEEEEEECCCCS
T ss_pred eEeCCCCCH-------HHHHHHHHHHHHhcCCCCEEEEecccc
Confidence 999999963 222333 24699999999975
|
| >2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A* | Back alignment and structure |
|---|
Probab=97.64 E-value=0.00011 Score=63.43 Aligned_cols=102 Identities=12% Similarity=0.114 Sum_probs=62.6
Q ss_pred cCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 010075 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (519)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (519)
+++++|+|+|+ |.+|+.+++.|.+.|. +|+++.|.. ++.. . ++ ......
T Consensus 4 ~~~~~v~I~G~-G~iG~~~a~~l~~~g~---~v~~~d~~~------~~~~-~---------~~-----------~~~~~~ 52 (144)
T 2hmt_A 4 IKNKQFAVIGL-GRFGGSIVKELHRMGH---EVLAVDINE------EKVN-A---------YA-----------SYATHA 52 (144)
T ss_dssp --CCSEEEECC-SHHHHHHHHHHHHTTC---CCEEEESCH------HHHH-T---------TT-----------TTCSEE
T ss_pred CcCCcEEEECC-CHHHHHHHHHHHHCCC---EEEEEeCCH------HHHH-H---------HH-----------HhCCEE
Confidence 35678999998 9999999999999884 567776642 1111 0 00 123456
Q ss_pred EeccCCCCCCCCChhhhHHHH-hcCccEEEEcCccCCccccHHHHHHHhHHHHHHHHHHHHhccCCceEEEEecc
Q 010075 90 VPGDISSEDLGLKDSNLKEEL-WNELDIMVNSAAITKFDERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTA 163 (519)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l-~~~vdiViH~Aa~v~f~~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V~vSTa 163 (519)
+.+|.++ .+....+ .+++|+||++++.. ...|. .+.+.+++. +.++++..++.
T Consensus 53 ~~~d~~~-------~~~l~~~~~~~~d~vi~~~~~~---------~~~~~----~~~~~~~~~-~~~~ii~~~~~ 106 (144)
T 2hmt_A 53 VIANATE-------ENELLSLGIRNFEYVIVAIGAN---------IQAST----LTTLLLKEL-DIPNIWVKAQN 106 (144)
T ss_dssp EECCTTC-------HHHHHTTTGGGCSEEEECCCSC---------HHHHH----HHHHHHHHT-TCSEEEEECCS
T ss_pred EEeCCCC-------HHHHHhcCCCCCCEEEECCCCc---------hHHHH----HHHHHHHHc-CCCeEEEEeCC
Confidence 7889874 3333333 56799999998751 12232 355566665 55566655543
|
| >1u7z_A Coenzyme A biosynthesis bifunctional protein coabc; ligase; HET: PMT; 2.30A {Escherichia coli} SCOP: c.72.3.1 PDB: 1u7w_A* 1u7u_A* 1u80_A* | Back alignment and structure |
|---|
Probab=97.63 E-value=9.7e-05 Score=69.80 Aligned_cols=37 Identities=14% Similarity=0.177 Sum_probs=32.8
Q ss_pred cCCCEEEEeCC----------------ccHHHHHHHHHHHHhCCCccEEEEEEecC
Q 010075 10 LENKTILVSGV----------------TGFVAKVFIEKILRVQPNVKKLYLFVRAA 49 (519)
Q Consensus 10 ~~~k~VlITGa----------------TGFlG~~Lv~~LL~~g~~v~~V~~LvR~~ 49 (519)
++||+|+|||| ||.+|.++++.|++.| .+|+++.|+.
T Consensus 6 l~gk~vlVTgG~T~E~iDpVR~itN~SSg~iG~aiA~~~~~~G---a~V~l~~~~~ 58 (226)
T 1u7z_A 6 LKHLNIMITAGPTREPLDPVRYISDHSSGKMGFAIAAAAARRG---ANVTLVSGPV 58 (226)
T ss_dssp TTTCEEEEEESBCEEESSSSEEEEECCCSHHHHHHHHHHHHTT---CEEEEEECSC
T ss_pred CCCCEEEEECCCCCcccCceeeccCCCccHHHHHHHHHHHHCC---CEEEEEECCc
Confidence 68999999999 7999999999999999 6777777764
|
| >1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9 | Back alignment and structure |
|---|
Probab=97.58 E-value=0.00052 Score=58.94 Aligned_cols=75 Identities=13% Similarity=0.204 Sum_probs=50.1
Q ss_pred CCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEEe
Q 010075 12 NKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVP 91 (519)
Q Consensus 12 ~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v~ 91 (519)
+|+|+|+|+ |++|+.+++.|.+.| .+|.++.|+.. ..+++. +. ..+..+.
T Consensus 4 ~m~i~IiG~-G~iG~~~a~~L~~~g---~~v~~~d~~~~---~~~~~~-------------~~----------~~~~~~~ 53 (140)
T 1lss_A 4 GMYIIIAGI-GRVGYTLAKSLSEKG---HDIVLIDIDKD---ICKKAS-------------AE----------IDALVIN 53 (140)
T ss_dssp -CEEEEECC-SHHHHHHHHHHHHTT---CEEEEEESCHH---HHHHHH-------------HH----------CSSEEEE
T ss_pred CCEEEEECC-CHHHHHHHHHHHhCC---CeEEEEECCHH---HHHHHH-------------Hh----------cCcEEEE
Confidence 578999986 999999999999987 57788877531 111111 10 1456788
Q ss_pred ccCCCCCCCCChhhhHHH-HhcCccEEEEcCcc
Q 010075 92 GDISSEDLGLKDSNLKEE-LWNELDIMVNSAAI 123 (519)
Q Consensus 92 gDl~~~~lgls~~~~~~~-l~~~vdiViH~Aa~ 123 (519)
+|.++ .+.... ..++.|+||++...
T Consensus 54 ~d~~~-------~~~l~~~~~~~~d~vi~~~~~ 79 (140)
T 1lss_A 54 GDCTK-------IKTLEDAGIEDADMYIAVTGK 79 (140)
T ss_dssp SCTTS-------HHHHHHTTTTTCSEEEECCSC
T ss_pred cCCCC-------HHHHHHcCcccCCEEEEeeCC
Confidence 89874 222222 25689999999753
|
| >1mld_A Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D)); HET: CIT; 1.83A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 2dfd_A* | Back alignment and structure |
|---|
Probab=97.50 E-value=0.0004 Score=69.19 Aligned_cols=115 Identities=15% Similarity=0.108 Sum_probs=72.0
Q ss_pred CEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEEec
Q 010075 13 KTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVPG 92 (519)
Q Consensus 13 k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v~g 92 (519)
++|.|+||+|++|..++..|+..+ -+.+|.++.+.. . +....++.+. ....++....+
T Consensus 1 mKI~IiGa~G~VG~~la~~L~~~~-~~~ev~L~Di~~-~----~~~a~dL~~~----------------~~~~~l~~~~~ 58 (314)
T 1mld_A 1 AKVAVLGASGGIGQPLSLLLKNSP-LVSRLTLYDIAH-T----PGVAADLSHI----------------ETRATVKGYLG 58 (314)
T ss_dssp CEEEEETTTSTTHHHHHHHHHTCT-TCSEEEEEESSS-H----HHHHHHHTTS----------------SSSCEEEEEES
T ss_pred CEEEEECCCChHHHHHHHHHHhCC-CCcEEEEEeCCc-c----HHHHHHHhcc----------------CcCceEEEecC
Confidence 579999999999999999988754 256888888875 1 1111111100 00012222211
Q ss_pred cCCCCCCCCChhhhHHHHhcCccEEEEcCccCCc-cccHHHHHHHhHHHHHHHHHHHHhccCCceEEEE
Q 010075 93 DISSEDLGLKDSNLKEELWNELDIMVNSAAITKF-DERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHV 160 (519)
Q Consensus 93 Dl~~~~lgls~~~~~~~l~~~vdiViH~Aa~v~f-~~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V~v 160 (519)
..+. +..+.+.|+||++|+...- .+.....+..|+..++.+.+.+.+...-..++.+
T Consensus 59 ----------t~d~-~~a~~~aDvVvi~ag~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~~p~a~viv~ 116 (314)
T 1mld_A 59 ----------PEQL-PDCLKGCDVVVIPAGVPRKPGMTRDDLFNTNATIVATLTAACAQHCPDAMICII 116 (314)
T ss_dssp ----------GGGH-HHHHTTCSEEEECCSCCCCTTCCGGGGHHHHHHHHHHHHHHHHHHCTTSEEEEC
T ss_pred ----------CCCH-HHHhCCCCEEEECCCcCCCCCCcHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEE
Confidence 1222 3556899999999997642 3333456889999999999988876322345544
|
| >3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus} | Back alignment and structure |
|---|
Probab=97.42 E-value=0.0009 Score=57.94 Aligned_cols=74 Identities=11% Similarity=0.141 Sum_probs=51.5
Q ss_pred CCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEE
Q 010075 11 ENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFV 90 (519)
Q Consensus 11 ~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v 90 (519)
.+++|+|+|+ |.+|+.+++.|.+.| .+|+++.|+.. ..+++. ...+.++
T Consensus 5 ~~~~v~I~G~-G~iG~~la~~L~~~g---~~V~~id~~~~---~~~~~~------------------------~~~~~~~ 53 (141)
T 3llv_A 5 GRYEYIVIGS-EAAGVGLVRELTAAG---KKVLAVDKSKE---KIELLE------------------------DEGFDAV 53 (141)
T ss_dssp -CCSEEEECC-SHHHHHHHHHHHHTT---CCEEEEESCHH---HHHHHH------------------------HTTCEEE
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHCC---CeEEEEECCHH---HHHHHH------------------------HCCCcEE
Confidence 4578999997 999999999999988 46677777531 112221 1356789
Q ss_pred eccCCCCCCCCChhhhHHHH-hcCccEEEEcCc
Q 010075 91 PGDISSEDLGLKDSNLKEEL-WNELDIMVNSAA 122 (519)
Q Consensus 91 ~gDl~~~~lgls~~~~~~~l-~~~vdiViH~Aa 122 (519)
.||.++ .+..+.+ .+++|+||.+.+
T Consensus 54 ~gd~~~-------~~~l~~~~~~~~d~vi~~~~ 79 (141)
T 3llv_A 54 IADPTD-------ESFYRSLDLEGVSAVLITGS 79 (141)
T ss_dssp ECCTTC-------HHHHHHSCCTTCSEEEECCS
T ss_pred ECCCCC-------HHHHHhCCcccCCEEEEecC
Confidence 999994 3333333 457999998766
|
| >2axq_A Saccharopine dehydrogenase; rossmann fold variant, saccharopine reductase fold (domain II), alpha/beta protein; 1.70A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=97.41 E-value=0.00029 Score=74.10 Aligned_cols=83 Identities=18% Similarity=0.262 Sum_probs=54.5
Q ss_pred hhhhcCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCC
Q 010075 6 VVEFLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISE 85 (519)
Q Consensus 6 i~~~~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~ 85 (519)
|..-+++++|+|+|| |++|+.+++.|++.+ . .+|++..|+... .+.+. ++ .
T Consensus 17 ~~~~l~~k~VlIiGA-GgiG~aia~~L~~~~-g-~~V~v~~R~~~k---a~~la-------------~~----------~ 67 (467)
T 2axq_A 17 IEGRHMGKNVLLLGS-GFVAQPVIDTLAAND-D-INVTVACRTLAN---AQALA-------------KP----------S 67 (467)
T ss_dssp ------CEEEEEECC-STTHHHHHHHHHTST-T-EEEEEEESSHHH---HHHHH-------------GG----------G
T ss_pred cccCCCCCEEEEECC-hHHHHHHHHHHHhCC-C-CeEEEEECCHHH---HHHHH-------------Hh----------c
Confidence 455567899999997 999999999999873 2 478898886321 11111 10 1
Q ss_pred ceEEEeccCCCCCCCCChhhhHHHHhcCccEEEEcCccC
Q 010075 86 KITFVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAIT 124 (519)
Q Consensus 86 ~v~~v~gDl~~~~lgls~~~~~~~l~~~vdiViH~Aa~v 124 (519)
++..+.+|+.+ ..+ ...+++++|+|||+++..
T Consensus 68 ~~~~~~~D~~d------~~~-l~~~l~~~DvVIn~tp~~ 99 (467)
T 2axq_A 68 GSKAISLDVTD------DSA-LDKVLADNDVVISLIPYT 99 (467)
T ss_dssp TCEEEECCTTC------HHH-HHHHHHTSSEEEECSCGG
T ss_pred CCcEEEEecCC------HHH-HHHHHcCCCEEEECCchh
Confidence 35667889884 233 346667899999999864
|
| >5mdh_A Malate dehydrogenase; oxidoreductase, (NAD(A)-CHOH(D)); HET: NAD; 2.40A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 4mdh_A* | Back alignment and structure |
|---|
Probab=97.34 E-value=0.00012 Score=73.51 Aligned_cols=118 Identities=16% Similarity=0.068 Sum_probs=70.7
Q ss_pred CEEEEeCCccHHHHHHHHHHHHhCCCccE-----EEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCce
Q 010075 13 KTILVSGVTGFVAKVFIEKILRVQPNVKK-----LYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKI 87 (519)
Q Consensus 13 k~VlITGaTGFlG~~Lv~~LL~~g~~v~~-----V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v 87 (519)
++|.||||+|++|++++..|+..+. +.+ |.++.+....... +-..-++.+. ...-+
T Consensus 4 ~kV~V~GaaG~VG~~la~~L~~~~~-~~e~~~~~l~L~Di~~~~~~~-~g~a~DL~~~-----------------~~~~~ 64 (333)
T 5mdh_A 4 IRVLVTGAAGQIAYSLLYSIGNGSV-FGKDQPIILVLLDITPMMGVL-DGVLMELQDC-----------------ALPLL 64 (333)
T ss_dssp EEEEESSTTSHHHHTTHHHHHTTTT-TCTTCCEEEEEECCGGGHHHH-HHHHHHHHHT-----------------CCTTE
T ss_pred eEEEEECCCCHHHHHHHHHHHhCCC-ccccCCCEEEEEeCCCccccc-hhhHhhhHhh-----------------hhccc
Confidence 6899999999999999999987542 223 7777665321111 1100011110 00111
Q ss_pred EEEeccCCCCCCCCChhhhHHHHhcCccEEEEcCccCC-ccccHHHHHHHhHHHHHHHHHHHHhccCCc--eEEEEe
Q 010075 88 TFVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITK-FDERYDVAFGINTLGVIHLVNFAKKCVKLK--VFVHVS 161 (519)
Q Consensus 88 ~~v~gDl~~~~lgls~~~~~~~l~~~vdiViH~Aa~v~-f~~~~~~~~~~Nv~gt~~ll~~a~~~~~l~--~~V~vS 161 (519)
..+.+ . ..+ ...+.+.|+|||+||..+ ..++....++.|+..++++++.+++. +.+ .++.+|
T Consensus 65 ~~~~~--~-------~~~--~~~~~daDvVvitAg~prkpG~tR~dll~~N~~i~~~i~~~i~~~-~~~~~~vivvs 129 (333)
T 5mdh_A 65 KDVIA--T-------DKE--EIAFKDLDVAILVGSMPRRDGMERKDLLKANVKIFKCQGAALDKY-AKKSVKVIVVG 129 (333)
T ss_dssp EEEEE--E-------SCH--HHHTTTCSEEEECCSCCCCTTCCTTTTHHHHHHHHHHHHHHHHHH-SCTTCEEEECS
T ss_pred CCEEE--c-------CCc--HHHhCCCCEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHh-CCCCeEEEEcC
Confidence 11111 1 111 245678999999998754 23455567899999999999999886 433 355454
|
| >4ina_A Saccharopine dehydrogenase; structural genomics, PSI-biology, northeast structural genom consortium, NESG, oxidoreductas; 2.49A {Wolinella succinogenes} | Back alignment and structure |
|---|
Probab=97.25 E-value=0.0004 Score=71.75 Aligned_cols=82 Identities=24% Similarity=0.208 Sum_probs=55.7
Q ss_pred CEEEEeCCccHHHHHHHHHHHHhCCCc-cEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEEe
Q 010075 13 KTILVSGVTGFVAKVFIEKILRVQPNV-KKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVP 91 (519)
Q Consensus 13 k~VlITGaTGFlG~~Lv~~LL~~g~~v-~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v~ 91 (519)
++|+|+|| |++|+.+++.|++.+ ++ .+|.+..|+... .+++.+++ .... ..++..+.
T Consensus 2 ~kVlIiGa-GgiG~~ia~~L~~~g-~~~~~V~v~~r~~~~---~~~la~~l---------~~~~--------~~~~~~~~ 59 (405)
T 4ina_A 2 AKVLQIGA-GGVGGVVAHKMAMNR-EVFSHITLASRTLSK---CQEIAQSI---------KAKG--------YGEIDITT 59 (405)
T ss_dssp CEEEEECC-SHHHHHHHHHHHTCT-TTCCEEEEEESCHHH---HHHHHHHH---------HHTT--------CCCCEEEE
T ss_pred CEEEEECC-CHHHHHHHHHHHhCC-CCceEEEEEECCHHH---HHHHHHHh---------hhhc--------CCceEEEE
Confidence 58999999 999999999999865 33 478888886422 22222111 1100 13678899
Q ss_pred ccCCCCCCCCChhhhHHHHhcC--ccEEEEcCcc
Q 010075 92 GDISSEDLGLKDSNLKEELWNE--LDIMVNSAAI 123 (519)
Q Consensus 92 gDl~~~~lgls~~~~~~~l~~~--vdiViH~Aa~ 123 (519)
+|+++ .+..+.++++ +|+|||+|+.
T Consensus 60 ~D~~d-------~~~l~~~l~~~~~DvVin~ag~ 86 (405)
T 4ina_A 60 VDADS-------IEELVALINEVKPQIVLNIALP 86 (405)
T ss_dssp CCTTC-------HHHHHHHHHHHCCSEEEECSCG
T ss_pred ecCCC-------HHHHHHHHHhhCCCEEEECCCc
Confidence 99984 3334466665 9999999985
|
| >1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9 | Back alignment and structure |
|---|
Probab=97.21 E-value=0.0028 Score=55.73 Aligned_cols=79 Identities=10% Similarity=0.206 Sum_probs=53.5
Q ss_pred CCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEE
Q 010075 11 ENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFV 90 (519)
Q Consensus 11 ~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v 90 (519)
.+++|+|.|+ |.+|+.+++.|.+.| .+|.++.|.... ..+++. +.. ..++.++
T Consensus 2 ~~~~vlI~G~-G~vG~~la~~L~~~g---~~V~vid~~~~~--~~~~~~-------------~~~--------~~~~~~i 54 (153)
T 1id1_A 2 RKDHFIVCGH-SILAINTILQLNQRG---QNVTVISNLPED--DIKQLE-------------QRL--------GDNADVI 54 (153)
T ss_dssp CCSCEEEECC-SHHHHHHHHHHHHTT---CCEEEEECCCHH--HHHHHH-------------HHH--------CTTCEEE
T ss_pred CCCcEEEECC-CHHHHHHHHHHHHCC---CCEEEEECCChH--HHHHHH-------------Hhh--------cCCCeEE
Confidence 4678999995 999999999999988 466777775211 111221 111 2467899
Q ss_pred eccCCCCCCCCChhhhHHHH-hcCccEEEEcCcc
Q 010075 91 PGDISSEDLGLKDSNLKEEL-WNELDIMVNSAAI 123 (519)
Q Consensus 91 ~gDl~~~~lgls~~~~~~~l-~~~vdiViH~Aa~ 123 (519)
.||.++ .+..... +++.|+||-+.+.
T Consensus 55 ~gd~~~-------~~~l~~a~i~~ad~vi~~~~~ 81 (153)
T 1id1_A 55 PGDSND-------SSVLKKAGIDRCRAILALSDN 81 (153)
T ss_dssp ESCTTS-------HHHHHHHTTTTCSEEEECSSC
T ss_pred EcCCCC-------HHHHHHcChhhCCEEEEecCC
Confidence 999984 3433343 6789999977643
|
| >3fi9_A Malate dehydrogenase; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Porphyromonas gingivalis} | Back alignment and structure |
|---|
Probab=97.11 E-value=0.00032 Score=70.68 Aligned_cols=111 Identities=15% Similarity=0.161 Sum_probs=69.2
Q ss_pred hhcCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCce
Q 010075 8 EFLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKI 87 (519)
Q Consensus 8 ~~~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v 87 (519)
+|+.+++|.|+||+|++|..++..|+..+. ..+|.++.+.... .+....++.+.. | ...++
T Consensus 4 ~~~~~~KV~ViGaaG~VG~~~a~~l~~~g~-~~evvLiDi~~~k---~~g~a~DL~~~~-~--------------~~~~i 64 (343)
T 3fi9_A 4 SYLTEEKLTIVGAAGMIGSNMAQTAAMMRL-TPNLCLYDPFAVG---LEGVAEEIRHCG-F--------------EGLNL 64 (343)
T ss_dssp CCSCSSEEEEETTTSHHHHHHHHHHHHTTC-CSCEEEECSCHHH---HHHHHHHHHHHC-C--------------TTCCC
T ss_pred cccCCCEEEEECCCChHHHHHHHHHHhcCC-CCEEEEEeCCchh---HHHHHHhhhhCc-C--------------CCCce
Confidence 789999999999999999999999988763 2467777664311 111110111100 0 00122
Q ss_pred EEEeccCCCCCCCCChhhhHHHHhcCccEEEEcCccCC-ccccHHHHHHHhHHHHHHHHHHHHhc
Q 010075 88 TFVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITK-FDERYDVAFGINTLGVIHLVNFAKKC 151 (519)
Q Consensus 88 ~~v~gDl~~~~lgls~~~~~~~l~~~vdiViH~Aa~v~-f~~~~~~~~~~Nv~gt~~ll~~a~~~ 151 (519)
.. . .+. ...+++.|+||++||..+ ..+.-.+.+..|+...+.+.+.+.+.
T Consensus 65 ~~-t------------~d~-~~al~dADvVvitaG~p~kpG~~R~dLl~~N~~I~~~i~~~i~~~ 115 (343)
T 3fi9_A 65 TF-T------------SDI-KEALTDAKYIVSSGGAPRKEGMTREDLLKGNAEIAAQLGKDIKSY 115 (343)
T ss_dssp EE-E------------SCH-HHHHTTEEEEEECCC-------CHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EE-c------------CCH-HHHhCCCCEEEEccCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHh
Confidence 21 1 122 245678999999999753 23456677899999999999998875
|
| >3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=97.06 E-value=0.00089 Score=68.09 Aligned_cols=85 Identities=14% Similarity=0.132 Sum_probs=59.0
Q ss_pred CCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEEe
Q 010075 12 NKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVP 91 (519)
Q Consensus 12 ~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v~ 91 (519)
.|+|+|.|| |++|+.+++.|.+. ..|.+..|+... .+++ .+.+..+.
T Consensus 16 ~mkilvlGa-G~vG~~~~~~L~~~----~~v~~~~~~~~~---~~~~-------------------------~~~~~~~~ 62 (365)
T 3abi_A 16 HMKVLILGA-GNIGRAIAWDLKDE----FDVYIGDVNNEN---LEKV-------------------------KEFATPLK 62 (365)
T ss_dssp CCEEEEECC-SHHHHHHHHHHTTT----SEEEEEESCHHH---HHHH-------------------------TTTSEEEE
T ss_pred ccEEEEECC-CHHHHHHHHHHhcC----CCeEEEEcCHHH---HHHH-------------------------hccCCcEE
Confidence 368999998 99999999988763 466776665321 1111 24567788
Q ss_pred ccCCCCCCCCChhhhHHHHhcCccEEEEcCccCCccccHHHHHHHhHHHHHHHHHHHHhc
Q 010075 92 GDISSEDLGLKDSNLKEELWNELDIMVNSAAITKFDERYDVAFGINTLGVIHLVNFAKKC 151 (519)
Q Consensus 92 gDl~~~~lgls~~~~~~~l~~~vdiViH~Aa~v~f~~~~~~~~~~Nv~gt~~ll~~a~~~ 151 (519)
.|+. +.+.+..+++++|+||++++.. + ...++++|.+.
T Consensus 63 ~d~~-------d~~~l~~~~~~~DvVi~~~p~~-~--------------~~~v~~~~~~~ 100 (365)
T 3abi_A 63 VDAS-------NFDKLVEVMKEFELVIGALPGF-L--------------GFKSIKAAIKS 100 (365)
T ss_dssp CCTT-------CHHHHHHHHTTCSEEEECCCGG-G--------------HHHHHHHHHHH
T ss_pred EecC-------CHHHHHHHHhCCCEEEEecCCc-c--------------cchHHHHHHhc
Confidence 9998 4444567888999999998652 1 12467788775
|
| >2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A* | Back alignment and structure |
|---|
Probab=97.04 E-value=0.0081 Score=52.83 Aligned_cols=82 Identities=13% Similarity=0.073 Sum_probs=53.0
Q ss_pred chhhhcCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccC
Q 010075 5 SVVEFLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFIS 84 (519)
Q Consensus 5 ~i~~~~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~ 84 (519)
.+++...+++|+|.|+ |.+|..+++.|.+.| .+|+++.|+...... + .. .
T Consensus 12 ~~~~~~~~~~v~IiG~-G~iG~~la~~L~~~g---~~V~vid~~~~~~~~---~---------------------~~--~ 61 (155)
T 2g1u_A 12 HMSKKQKSKYIVIFGC-GRLGSLIANLASSSG---HSVVVVDKNEYAFHR---L---------------------NS--E 61 (155)
T ss_dssp -----CCCCEEEEECC-SHHHHHHHHHHHHTT---CEEEEEESCGGGGGG---S---------------------CT--T
T ss_pred hhhcccCCCcEEEECC-CHHHHHHHHHHHhCC---CeEEEEECCHHHHHH---H---------------------Hh--c
Confidence 3567778899999995 999999999999987 578888886432110 0 00 1
Q ss_pred CceEEEeccCCCCCCCCChhhhHHHH-hcCccEEEEcCcc
Q 010075 85 EKITFVPGDISSEDLGLKDSNLKEEL-WNELDIMVNSAAI 123 (519)
Q Consensus 85 ~~v~~v~gDl~~~~lgls~~~~~~~l-~~~vdiViH~Aa~ 123 (519)
..+..+.+|..+ .+..... .+++|+||.+.+.
T Consensus 62 ~g~~~~~~d~~~-------~~~l~~~~~~~ad~Vi~~~~~ 94 (155)
T 2g1u_A 62 FSGFTVVGDAAE-------FETLKECGMEKADMVFAFTND 94 (155)
T ss_dssp CCSEEEESCTTS-------HHHHHTTTGGGCSEEEECSSC
T ss_pred CCCcEEEecCCC-------HHHHHHcCcccCCEEEEEeCC
Confidence 245677888773 2323232 4679999998764
|
| >1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1 | Back alignment and structure |
|---|
Probab=96.69 E-value=0.0022 Score=58.85 Aligned_cols=36 Identities=14% Similarity=0.204 Sum_probs=31.7
Q ss_pred cCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEec
Q 010075 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRA 48 (519)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~ 48 (519)
-.|++|+||||+|.+|..+++.+...| .+|++..|+
T Consensus 37 ~~g~~vlV~Ga~ggiG~~~~~~~~~~G---~~V~~~~~~ 72 (198)
T 1pqw_A 37 SPGERVLIHSATGGVGMAAVSIAKMIG---ARIYTTAGS 72 (198)
T ss_dssp CTTCEEEETTTTSHHHHHHHHHHHHHT---CEEEEEESS
T ss_pred CCCCEEEEeeCCChHHHHHHHHHHHcC---CEEEEEeCC
Confidence 368999999999999999999998888 578888875
|
| >3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A* | Back alignment and structure |
|---|
Probab=96.56 E-value=0.012 Score=58.48 Aligned_cols=46 Identities=20% Similarity=0.208 Sum_probs=35.8
Q ss_pred cCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHH
Q 010075 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRF 58 (519)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl 58 (519)
++|++++|+|| |.+|+.++..|.+.|. .+|++..|+++.....+++
T Consensus 152 l~gk~~lVlGa-GG~g~aia~~L~~~Ga--~~V~i~nR~~~~~~~a~~l 197 (315)
T 3tnl_A 152 IIGKKMTICGA-GGAATAICIQAALDGV--KEISIFNRKDDFYANAEKT 197 (315)
T ss_dssp CTTSEEEEECC-SHHHHHHHHHHHHTTC--SEEEEEECSSTTHHHHHHH
T ss_pred ccCCEEEEECC-ChHHHHHHHHHHHCCC--CEEEEEECCCchHHHHHHH
Confidence 47899999997 8999999999999873 5899999985433333333
|
| >3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633} | Back alignment and structure |
|---|
Probab=96.47 E-value=0.014 Score=52.78 Aligned_cols=75 Identities=13% Similarity=0.180 Sum_probs=51.7
Q ss_pred cCCCEEEEeCCccHHHHHHHHHHHHh-CCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceE
Q 010075 10 LENKTILVSGVTGFVAKVFIEKILRV-QPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKIT 88 (519)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lv~~LL~~-g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~ 88 (519)
..+++|+|.| .|.+|..+++.|.+. | .+|+++.|+... .+.+. ...+.
T Consensus 37 ~~~~~v~IiG-~G~~G~~~a~~L~~~~g---~~V~vid~~~~~---~~~~~------------------------~~g~~ 85 (183)
T 3c85_A 37 PGHAQVLILG-MGRIGTGAYDELRARYG---KISLGIEIREEA---AQQHR------------------------SEGRN 85 (183)
T ss_dssp CTTCSEEEEC-CSHHHHHHHHHHHHHHC---SCEEEEESCHHH---HHHHH------------------------HTTCC
T ss_pred CCCCcEEEEC-CCHHHHHHHHHHHhccC---CeEEEEECCHHH---HHHHH------------------------HCCCC
Confidence 3467899998 599999999999998 8 466777775321 11111 13456
Q ss_pred EEeccCCCCCCCCChhhhHHHH--hcCccEEEEcCc
Q 010075 89 FVPGDISSEDLGLKDSNLKEEL--WNELDIMVNSAA 122 (519)
Q Consensus 89 ~v~gDl~~~~lgls~~~~~~~l--~~~vdiViH~Aa 122 (519)
++.||.++ .+....+ .+++|+||.+.+
T Consensus 86 ~~~gd~~~-------~~~l~~~~~~~~ad~vi~~~~ 114 (183)
T 3c85_A 86 VISGDATD-------PDFWERILDTGHVKLVLLAMP 114 (183)
T ss_dssp EEECCTTC-------HHHHHTBCSCCCCCEEEECCS
T ss_pred EEEcCCCC-------HHHHHhccCCCCCCEEEEeCC
Confidence 78899884 3333344 568999998765
|
| >3hhp_A Malate dehydrogenase; MDH, citric acid cycle, TCA cycle, NAD, oxidoreductase, tricarboxylic acid cycle; 1.45A {Escherichia coli k-12} PDB: 2pwz_A 2cmd_A* 1emd_A* 1ib6_A* 1ie3_A* 4e0b_A* | Back alignment and structure |
|---|
Probab=96.20 E-value=0.074 Score=52.60 Aligned_cols=107 Identities=18% Similarity=0.163 Sum_probs=69.4
Q ss_pred CEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEEec
Q 010075 13 KTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVPG 92 (519)
Q Consensus 13 k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v~g 92 (519)
|+|.|+||+|.+|..++..|....+-+.++.++.+.+. .. .+.+ ++.. .+ ...++..+.+
T Consensus 1 mKV~IiGAaG~VG~~~a~~L~~~~~~~~el~L~Di~~~-~~-G~a~--Dl~~----------~~------~~~~v~~~~~ 60 (312)
T 3hhp_A 1 MKVAVLGAAGGIGQALALLLKTQLPSGSELSLYDIAPV-TP-GVAV--DLSH----------IP------TAVKIKGFSG 60 (312)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHHSCTTEEEEEECSSTT-HH-HHHH--HHHT----------SC------SSEEEEEECS
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCCCceEEEEecCCC-ch-hHHH--HhhC----------CC------CCceEEEecC
Confidence 57999999999999999888775233467888887652 11 1111 1110 00 0112222222
Q ss_pred cCCCCCCCCChhhhHHHHhcCccEEEEcCccCC-ccccHHHHHHHhHHHHHHHHHHHHhc
Q 010075 93 DISSEDLGLKDSNLKEELWNELDIMVNSAAITK-FDERYDVAFGINTLGVIHLVNFAKKC 151 (519)
Q Consensus 93 Dl~~~~lgls~~~~~~~l~~~vdiViH~Aa~v~-f~~~~~~~~~~Nv~gt~~ll~~a~~~ 151 (519)
+ .+ ...+.+.|+||-+|+..+ ....-.+.++.|+.-.+.+.+.+.+.
T Consensus 61 --~--------~~--~~~~~~aDivii~ag~~rkpG~~R~dll~~N~~I~~~i~~~i~~~ 108 (312)
T 3hhp_A 61 --E--------DA--TPALEGADVVLISAGVARKPGMDRSDLFNVNAGIVKNLVQQVAKT 108 (312)
T ss_dssp --S--------CC--HHHHTTCSEEEECCSCSCCTTCCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred --C--------Cc--HHHhCCCCEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 1 11 144578999999999764 34567788999999999999988775
|
| >1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A* | Back alignment and structure |
|---|
Probab=96.15 E-value=0.0068 Score=60.46 Aligned_cols=36 Identities=22% Similarity=0.100 Sum_probs=31.5
Q ss_pred CCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecC
Q 010075 11 ENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAA 49 (519)
Q Consensus 11 ~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~ 49 (519)
.|++|+||||+|.+|..+++.+...| .+|++..|+.
T Consensus 145 ~g~~vlV~Ga~ggiG~~~~~~~~~~G---~~V~~~~~~~ 180 (333)
T 1v3u_A 145 GGETVLVSAAAGAVGSVVGQIAKLKG---CKVVGAAGSD 180 (333)
T ss_dssp SSCEEEEESTTBHHHHHHHHHHHHTT---CEEEEEESSH
T ss_pred CCCEEEEecCCCcHHHHHHHHHHHCC---CEEEEEeCCH
Confidence 57999999999999999999998887 5788888753
|
| >2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=96.13 E-value=0.011 Score=59.30 Aligned_cols=38 Identities=8% Similarity=0.121 Sum_probs=32.8
Q ss_pred cCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCC
Q 010075 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAAD 50 (519)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~ 50 (519)
-.|++|||+||+|.+|..+++.+...| .+|++..|+..
T Consensus 168 ~~g~~vlV~Ga~ggiG~~~~~~a~~~G---a~V~~~~~~~~ 205 (347)
T 2hcy_A 168 MAGHWVAISGAAGGLGSLAVQYAKAMG---YRVLGIDGGEG 205 (347)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTT---CEEEEEECSTT
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCC---CcEEEEcCCHH
Confidence 368999999999999999999888877 58899888754
|
| >1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1 | Back alignment and structure |
|---|
Probab=96.13 E-value=0.01 Score=58.90 Aligned_cols=36 Identities=19% Similarity=0.116 Sum_probs=31.9
Q ss_pred CCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecC
Q 010075 11 ENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAA 49 (519)
Q Consensus 11 ~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~ 49 (519)
.|++|+||||+|.+|..+++.+...| .+|++..|+.
T Consensus 140 ~g~~vlV~Ga~ggiG~~~~~~a~~~G---~~V~~~~~~~ 175 (327)
T 1qor_A 140 PDEQFLFHAAAGGVGLIACQWAKALG---AKLIGTVGTA 175 (327)
T ss_dssp TTCEEEESSTTBHHHHHHHHHHHHHT---CEEEEEESSH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHcC---CEEEEEeCCH
Confidence 58999999999999999999999888 5788888863
|
| >1dih_A Dihydrodipicolinate reductase; oxidoreductase; HET: NDP; 2.20A {Escherichia coli} SCOP: c.2.1.3 d.81.1.3 PDB: 1arz_A* 1dru_A* 1drv_A* 1drw_A* | Back alignment and structure |
|---|
Probab=96.01 E-value=0.0044 Score=60.28 Aligned_cols=34 Identities=18% Similarity=0.296 Sum_probs=26.0
Q ss_pred CCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEe
Q 010075 12 NKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVR 47 (519)
Q Consensus 12 ~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR 47 (519)
.++|.|+|+||.+|+.+++.+++. ++ .++.+.++
T Consensus 5 ~mkV~V~Ga~G~mG~~~~~~~~~~-~~-~elva~~d 38 (273)
T 1dih_A 5 NIRVAIAGAGGRMGRQLIQAALAL-EG-VQLGAALE 38 (273)
T ss_dssp BEEEEETTTTSHHHHHHHHHHHHS-TT-EECCCEEC
T ss_pred CcEEEEECCCCHHHHHHHHHHHhC-CC-CEEEEEEe
Confidence 468999999999999999998764 44 35554444
|
| >1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP} | Back alignment and structure |
|---|
Probab=95.95 E-value=0.011 Score=58.90 Aligned_cols=37 Identities=8% Similarity=0.109 Sum_probs=32.3
Q ss_pred cCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecC
Q 010075 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAA 49 (519)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~ 49 (519)
-.|++|+||||+|.+|..+++.+...| .+|++..|+.
T Consensus 144 ~~g~~vlV~Ga~ggiG~~~~~~a~~~G---~~Vi~~~~~~ 180 (333)
T 1wly_A 144 KPGDYVLIHAAAGGMGHIMVPWARHLG---ATVIGTVSTE 180 (333)
T ss_dssp CTTCEEEETTTTSTTHHHHHHHHHHTT---CEEEEEESSH
T ss_pred CCCCEEEEECCccHHHHHHHHHHHHCC---CEEEEEeCCH
Confidence 367999999999999999999998887 5789988864
|
| >3t4e_A Quinate/shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 1.95A {Salmonella enterica subsp} PDB: 1npd_A* 1o9b_A* 1vi2_A* | Back alignment and structure |
|---|
Probab=95.87 E-value=0.031 Score=55.31 Aligned_cols=47 Identities=26% Similarity=0.296 Sum_probs=36.3
Q ss_pred cCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHH
Q 010075 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQ 59 (519)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~ 59 (519)
.++++++|+|| |.+|+.++..|.+.|. .+|++..|++......+++.
T Consensus 146 l~gk~~lVlGA-GGaaraia~~L~~~G~--~~v~v~nRt~~~~~~a~~la 192 (312)
T 3t4e_A 146 MRGKTMVLLGA-GGAATAIGAQAAIEGI--KEIKLFNRKDDFFEKAVAFA 192 (312)
T ss_dssp CTTCEEEEECC-SHHHHHHHHHHHHTTC--SEEEEEECSSTHHHHHHHHH
T ss_pred cCCCEEEEECc-CHHHHHHHHHHHHcCC--CEEEEEECCCchHHHHHHHH
Confidence 46899999996 8899999999999773 68999999855433333333
|
| >3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima} | Back alignment and structure |
|---|
Probab=95.86 E-value=0.04 Score=51.23 Aligned_cols=73 Identities=15% Similarity=0.222 Sum_probs=49.6
Q ss_pred CEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEEec
Q 010075 13 KTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVPG 92 (519)
Q Consensus 13 k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v~g 92 (519)
|+|+|.|+ |.+|+.+++.|.+.| ..|.++.++... .+++. + ...+.++.|
T Consensus 1 M~iiIiG~-G~~G~~la~~L~~~g---~~v~vid~~~~~---~~~l~-------------~----------~~~~~~i~g 50 (218)
T 3l4b_C 1 MKVIIIGG-ETTAYYLARSMLSRK---YGVVIINKDREL---CEEFA-------------K----------KLKATIIHG 50 (218)
T ss_dssp CCEEEECC-HHHHHHHHHHHHHTT---CCEEEEESCHHH---HHHHH-------------H----------HSSSEEEES
T ss_pred CEEEEECC-CHHHHHHHHHHHhCC---CeEEEEECCHHH---HHHHH-------------H----------HcCCeEEEc
Confidence 57999996 999999999999988 456777765321 11111 1 134678999
Q ss_pred cCCCCCCCCChhhhHHHH-hcCccEEEEcCc
Q 010075 93 DISSEDLGLKDSNLKEEL-WNELDIMVNSAA 122 (519)
Q Consensus 93 Dl~~~~lgls~~~~~~~l-~~~vdiViH~Aa 122 (519)
|.++ .+..+.. .++.|+||-+.+
T Consensus 51 d~~~-------~~~l~~a~i~~ad~vi~~~~ 74 (218)
T 3l4b_C 51 DGSH-------KEILRDAEVSKNDVVVILTP 74 (218)
T ss_dssp CTTS-------HHHHHHHTCCTTCEEEECCS
T ss_pred CCCC-------HHHHHhcCcccCCEEEEecC
Confidence 9994 3333333 578999996643
|
| >2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A* | Back alignment and structure |
|---|
Probab=95.85 E-value=0.016 Score=58.45 Aligned_cols=37 Identities=8% Similarity=-0.058 Sum_probs=32.1
Q ss_pred cCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecC
Q 010075 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAA 49 (519)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~ 49 (519)
-.|++|+||||+|.+|..++..+...| .+|++..|+.
T Consensus 161 ~~g~~vlV~Ga~ggiG~~~~~~a~~~G---a~Vi~~~~~~ 197 (354)
T 2j8z_A 161 QAGDYVLIHAGLSGVGTAAIQLTRMAG---AIPLVTAGSQ 197 (354)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHHHTT---CEEEEEESCH
T ss_pred CCCCEEEEECCccHHHHHHHHHHHHcC---CEEEEEeCCH
Confidence 357999999999999999999988877 5788988864
|
| >1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 | Back alignment and structure |
|---|
Probab=95.83 E-value=0.014 Score=58.76 Aligned_cols=37 Identities=16% Similarity=0.095 Sum_probs=32.0
Q ss_pred cCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecC
Q 010075 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAA 49 (519)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~ 49 (519)
-.|++|+||||+|.+|..++..+...| .+|++..|+.
T Consensus 169 ~~g~~vlV~GasggiG~~~~~~a~~~G---a~Vi~~~~~~ 205 (351)
T 1yb5_A 169 KAGESVLVHGASGGVGLAACQIARAYG---LKILGTAGTE 205 (351)
T ss_dssp CTTCEEEEETCSSHHHHHHHHHHHHTT---CEEEEEESSH
T ss_pred CCcCEEEEECCCChHHHHHHHHHHHCC---CEEEEEeCCh
Confidence 357999999999999999999888877 5788888864
|
| >1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A* | Back alignment and structure |
|---|
Probab=95.72 E-value=0.0079 Score=55.69 Aligned_cols=34 Identities=15% Similarity=0.178 Sum_probs=29.6
Q ss_pred CEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecC
Q 010075 13 KTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAA 49 (519)
Q Consensus 13 k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~ 49 (519)
|+|+|+||+|++|+.++..|++.+ .+|++..|+.
T Consensus 1 m~i~iiGa~G~~G~~ia~~l~~~g---~~V~~~~r~~ 34 (212)
T 1jay_A 1 MRVALLGGTGNLGKGLALRLATLG---HEIVVGSRRE 34 (212)
T ss_dssp CEEEEETTTSHHHHHHHHHHHTTT---CEEEEEESSH
T ss_pred CeEEEEcCCCHHHHHHHHHHHHCC---CEEEEEeCCH
Confidence 479999999999999999999987 5788888863
|
| >4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus} | Back alignment and structure |
|---|
Probab=95.60 E-value=0.036 Score=55.49 Aligned_cols=39 Identities=21% Similarity=0.226 Sum_probs=32.9
Q ss_pred cCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCc
Q 010075 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADI 51 (519)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~ 51 (519)
-.|++|+|+||+|.+|...+..+...| .+|++..|+...
T Consensus 158 ~~g~~VlV~Gasg~iG~~~~~~a~~~G---a~Vi~~~~~~~~ 196 (342)
T 4eye_A 158 RAGETVLVLGAAGGIGTAAIQIAKGMG---AKVIAVVNRTAA 196 (342)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHHHTT---CEEEEEESSGGG
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHcC---CEEEEEeCCHHH
Confidence 358999999999999999998888877 588998886543
|
| >1p9o_A Phosphopantothenoylcysteine synthetase; ligase; 2.30A {Homo sapiens} SCOP: c.72.3.1 | Back alignment and structure |
|---|
Probab=95.60 E-value=0.025 Score=55.89 Aligned_cols=38 Identities=21% Similarity=0.248 Sum_probs=32.4
Q ss_pred cCCCE-EEEeC-Cc-----------------cHHHHHHHHHHHHhCCCccEEEEEEecCC
Q 010075 10 LENKT-ILVSG-VT-----------------GFVAKVFIEKILRVQPNVKKLYLFVRAAD 50 (519)
Q Consensus 10 ~~~k~-VlITG-aT-----------------GFlG~~Lv~~LL~~g~~v~~V~~LvR~~~ 50 (519)
++|++ ||||+ +| |-.|.++++.+++.| ..|+++.|+..
T Consensus 34 l~gk~~VLITaGgT~EpID~DpVRfItN~SSGkmG~aiAe~~~~~G---a~V~lv~g~~s 90 (313)
T 1p9o_A 34 AQGRRVVLVTSGGTKVPLEARPVRFLDNFSSGRRGATSAEAFLAAG---YGVLFLYRARS 90 (313)
T ss_dssp HTTCCEEEEEESBCEEESSSSCSEEEEECCCCHHHHHHHHHHHHTT---CEEEEEEETTS
T ss_pred hcCCeEEEEeCCCcccccCCCceeEecCCCCcHHHHHHHHHHHHCC---CEEEEEecCCC
Confidence 57888 99994 56 899999999999999 67888888754
|
| >1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B* | Back alignment and structure |
|---|
Probab=95.52 E-value=0.086 Score=50.32 Aligned_cols=88 Identities=19% Similarity=0.173 Sum_probs=56.9
Q ss_pred hhcCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcc----------------cHHHHHHHHHhhhhhHHHH
Q 010075 8 EFLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADID----------------SAALRFQNEVLAKDVFNVL 71 (519)
Q Consensus 8 ~~~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~----------------~~~~rl~~~~~~~~~f~~l 71 (519)
+-+++++|+|.|+ |.+|..+++.|.+.| |.+|.++.+..-.. ...+.+. +++
T Consensus 27 ~~l~~~~VlVvG~-Gg~G~~va~~La~~G--v~~i~lvD~d~v~~sNl~Rq~l~~~~diG~~Ka~~~~---------~~l 94 (249)
T 1jw9_B 27 EALKDSRVLIVGL-GGLGCAASQYLASAG--VGNLTLLDFDTVSLSNLQRQTLHSDATVGQPKVESAR---------DAL 94 (249)
T ss_dssp HHHHHCEEEEECC-SHHHHHHHHHHHHHT--CSEEEEECCCBCCGGGGGTCTTCCGGGTTSBHHHHHH---------HHH
T ss_pred HHHhCCeEEEEee-CHHHHHHHHHHHHcC--CCeEEEEcCCCcccccCCcccccChhhcCcHHHHHHH---------HHH
Confidence 3467799999995 789999999999987 47888888765211 1111111 222
Q ss_pred HhhhccccccccCCceEEEeccCCCCCCCCChhhhHHHHhcCccEEEEcCc
Q 010075 72 KEKWGTRLNSFISEKITFVPGDISSEDLGLKDSNLKEELWNELDIMVNSAA 122 (519)
Q Consensus 72 ~~~~~~~~~~~~~~~v~~v~gDl~~~~lgls~~~~~~~l~~~vdiViH~Aa 122 (519)
++..| .-+++.+..+++ +.+. ..+++++|+||.+..
T Consensus 95 ~~~np-------~~~v~~~~~~~~-------~~~~-~~~~~~~DvVi~~~d 130 (249)
T 1jw9_B 95 TRINP-------HIAITPVNALLD-------DAEL-AALIAEHDLVLDCTD 130 (249)
T ss_dssp HHHCT-------TSEEEEECSCCC-------HHHH-HHHHHTSSEEEECCS
T ss_pred HHHCC-------CcEEEEEeccCC-------HhHH-HHHHhCCCEEEEeCC
Confidence 22222 135667777776 4433 366789999998864
|
| >1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A* | Back alignment and structure |
|---|
Probab=95.45 E-value=0.031 Score=56.03 Aligned_cols=37 Identities=19% Similarity=0.121 Sum_probs=31.6
Q ss_pred cCCCEEEEeCCccHHHHHHHHHHHHh-CCCccEEEEEEecC
Q 010075 10 LENKTILVSGVTGFVAKVFIEKILRV-QPNVKKLYLFVRAA 49 (519)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lv~~LL~~-g~~v~~V~~LvR~~ 49 (519)
-.|++|+||||+|.+|..+++.+... | .+|++..|+.
T Consensus 169 ~~g~~vlV~Gagg~iG~~~~~~a~~~~G---a~Vi~~~~~~ 206 (347)
T 1jvb_A 169 DPTKTLLVVGAGGGLGTMAVQIAKAVSG---ATIIGVDVRE 206 (347)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHHTC---CEEEEEESSH
T ss_pred CCCCEEEEECCCccHHHHHHHHHHHcCC---CeEEEEcCCH
Confidence 36799999999999999999988888 7 5788888763
|
| >3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A* | Back alignment and structure |
|---|
Probab=95.44 E-value=0.029 Score=55.67 Aligned_cols=37 Identities=19% Similarity=0.100 Sum_probs=32.0
Q ss_pred cCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecC
Q 010075 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAA 49 (519)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~ 49 (519)
-.|++|+|+||+|.+|...+..+...| .+|++..|+.
T Consensus 139 ~~g~~VlV~Ga~g~iG~~~~~~a~~~G---a~Vi~~~~~~ 175 (325)
T 3jyn_A 139 KPGEIILFHAAAGGVGSLACQWAKALG---AKLIGTVSSP 175 (325)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHHHHT---CEEEEEESSH
T ss_pred CCCCEEEEEcCCcHHHHHHHHHHHHCC---CEEEEEeCCH
Confidence 358999999999999999999888888 5789888764
|
| >3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis} | Back alignment and structure |
|---|
Probab=95.44 E-value=0.046 Score=54.56 Aligned_cols=40 Identities=15% Similarity=0.204 Sum_probs=33.7
Q ss_pred cCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcc
Q 010075 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADID 52 (519)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~ 52 (519)
-.|++|+|+||+|.+|...+..+...| .+|++..|+....
T Consensus 143 ~~g~~VlV~Ga~g~iG~~~~~~a~~~G---a~Vi~~~~~~~~~ 182 (340)
T 3gms_A 143 QRNDVLLVNACGSAIGHLFAQLSQILN---FRLIAVTRNNKHT 182 (340)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHHHHT---CEEEEEESSSTTH
T ss_pred CCCCEEEEeCCccHHHHHHHHHHHHcC---CEEEEEeCCHHHH
Confidence 368999999999999999998888777 5889999876543
|
| >2hjs_A USG-1 protein homolog; aspartate-semialdehyde dehydrogenase, probable hydrolase, PS aeruginosa, structurual genomics; 2.20A {Pseudomonas aeruginosa} SCOP: c.2.1.3 d.81.1.1 | Back alignment and structure |
|---|
Probab=95.42 E-value=0.018 Score=57.88 Aligned_cols=34 Identities=21% Similarity=0.291 Sum_probs=27.4
Q ss_pred CEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEE
Q 010075 13 KTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFV 46 (519)
Q Consensus 13 k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~Lv 46 (519)
++|+|.||||.+|+.+++.|+++++...+|.++.
T Consensus 7 ~kV~IiGAtG~iG~~llr~L~~~~~~~~elv~i~ 40 (340)
T 2hjs_A 7 LNVAVVGATGSVGEALVGLLDERDFPLHRLHLLA 40 (340)
T ss_dssp CCEEEETTTSHHHHHHHHHHHHTTCCCSCEEEEE
T ss_pred cEEEEECCCCHHHHHHHHHHHhCCCCcEEEEEEe
Confidence 6799999999999999999986654445666665
|
| >2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A* | Back alignment and structure |
|---|
Probab=95.36 E-value=0.022 Score=57.34 Aligned_cols=36 Identities=19% Similarity=0.115 Sum_probs=31.0
Q ss_pred CC--CEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEec
Q 010075 11 EN--KTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRA 48 (519)
Q Consensus 11 ~~--k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~ 48 (519)
.| ++|+||||+|.+|..++..+...|. .+|++..|+
T Consensus 158 ~g~~~~vlI~GasggiG~~~~~~a~~~Ga--~~Vi~~~~~ 195 (357)
T 2zb4_A 158 AGSNKTMVVSGAAGACGSVAGQIGHFLGC--SRVVGICGT 195 (357)
T ss_dssp TTSCCEEEESSTTBHHHHHHHHHHHHTTC--SEEEEEESC
T ss_pred CCCccEEEEECCCcHHHHHHHHHHHHCCC--CeEEEEeCC
Confidence 57 9999999999999999998888772 288888886
|
| >4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A* | Back alignment and structure |
|---|
Probab=95.35 E-value=0.02 Score=57.06 Aligned_cols=37 Identities=19% Similarity=0.148 Sum_probs=31.8
Q ss_pred cCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecC
Q 010075 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAA 49 (519)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~ 49 (519)
-.|++|+|+||+|.+|..+++.+...| .+|++..|+.
T Consensus 148 ~~g~~vlI~Ga~g~iG~~~~~~a~~~G---a~Vi~~~~~~ 184 (336)
T 4b7c_A 148 KNGETVVISGAAGAVGSVAGQIARLKG---CRVVGIAGGA 184 (336)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHHHTT---CEEEEEESSH
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCC---CEEEEEeCCH
Confidence 368999999999999999998888877 5888888764
|
| >2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=95.33 E-value=0.022 Score=57.87 Aligned_cols=36 Identities=11% Similarity=0.150 Sum_probs=31.3
Q ss_pred cCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecC
Q 010075 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAA 49 (519)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~ 49 (519)
+.+++|+|+|+ |.+|..+++.+...| .+|++..|+.
T Consensus 164 l~~~~V~ViGa-G~iG~~~a~~l~~~G---a~V~~~d~~~ 199 (369)
T 2eez_A 164 VAPASVVILGG-GTVGTNAAKIALGMG---AQVTILDVNH 199 (369)
T ss_dssp BCCCEEEEECC-SHHHHHHHHHHHHTT---CEEEEEESCH
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHhCC---CEEEEEECCH
Confidence 56899999998 999999999999888 5788888763
|
| >2nqt_A N-acetyl-gamma-glutamyl-phosphate reductase; apoprotein, dimer, rossmann fold, structural genomics, PSI, protein structure initiative; 1.58A {Mycobacterium tuberculosis} PDB: 2i3a_A* 2i3g_A | Back alignment and structure |
|---|
Probab=95.15 E-value=0.016 Score=58.48 Aligned_cols=37 Identities=16% Similarity=0.390 Sum_probs=29.2
Q ss_pred cCCCEEEEeCCccHHHHHHHHHHHHhCC-----CccEEEEEEec
Q 010075 10 LENKTILVSGVTGFVAKVFIEKILRVQP-----NVKKLYLFVRA 48 (519)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lv~~LL~~g~-----~v~~V~~LvR~ 48 (519)
|+.++|+|.||||.+|+.|++.|+++ + ++ +|.++.+.
T Consensus 7 M~m~kVaIvGATG~vG~~llr~L~~~-~~~~~~~~-ei~~l~s~ 48 (352)
T 2nqt_A 7 ANATKVAVAGASGYAGGEILRLLLGH-PAYADGRL-RIGALTAA 48 (352)
T ss_dssp CSCEEEEEETTTSHHHHHHHHHHHTC-HHHHTTSE-EEEEEEES
T ss_pred ccCCEEEEECCCCHHHHHHHHHHHcC-CCCCCccE-EEEEEECC
Confidence 34468999999999999999999874 4 43 67777654
|
| >3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A* | Back alignment and structure |
|---|
Probab=95.14 E-value=0.034 Score=55.32 Aligned_cols=37 Identities=8% Similarity=0.039 Sum_probs=31.6
Q ss_pred cCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecC
Q 010075 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAA 49 (519)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~ 49 (519)
-.|++|+|+||+|.+|...+..+...| .+|++..|+.
T Consensus 147 ~~g~~vlV~Ga~g~iG~~~~~~a~~~G---a~Vi~~~~~~ 183 (334)
T 3qwb_A 147 KKGDYVLLFAAAGGVGLILNQLLKMKG---AHTIAVASTD 183 (334)
T ss_dssp CTTCEEEESSTTBHHHHHHHHHHHHTT---CEEEEEESSH
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCC---CEEEEEeCCH
Confidence 368999999999999999998888777 5788888853
|
| >4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli} | Back alignment and structure |
|---|
Probab=95.08 E-value=0.021 Score=57.48 Aligned_cols=37 Identities=16% Similarity=0.224 Sum_probs=32.0
Q ss_pred cCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecC
Q 010075 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAA 49 (519)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~ 49 (519)
-.|++|+|+||+|.+|..++..+...| .+|++..|+.
T Consensus 166 ~~g~~VlV~Gg~g~iG~~~~~~a~~~G---a~Vi~~~~~~ 202 (353)
T 4dup_A 166 TEGESVLIHGGTSGIGTTAIQLARAFG---AEVYATAGST 202 (353)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHHHTT---CEEEEEESSH
T ss_pred CCCCEEEEEcCCCHHHHHHHHHHHHcC---CEEEEEeCCH
Confidence 357999999999999999999888877 5789988864
|
| >2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=95.06 E-value=0.038 Score=55.24 Aligned_cols=37 Identities=11% Similarity=0.006 Sum_probs=31.7
Q ss_pred cCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecC
Q 010075 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAA 49 (519)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~ 49 (519)
-.|++|||+||+|.+|..++..+...| .+|++..|+.
T Consensus 165 ~~g~~vlV~Gasg~iG~~~~~~a~~~G---~~Vi~~~~~~ 201 (343)
T 2eih_A 165 RPGDDVLVMAAGSGVSVAAIQIAKLFG---ARVIATAGSE 201 (343)
T ss_dssp CTTCEEEECSTTSTTHHHHHHHHHHTT---CEEEEEESSH
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCC---CEEEEEeCCH
Confidence 357899999999999999999888877 5788888863
|
| >3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12} | Back alignment and structure |
|---|
Probab=95.06 E-value=0.048 Score=46.91 Aligned_cols=73 Identities=14% Similarity=0.162 Sum_probs=50.2
Q ss_pred CEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEEec
Q 010075 13 KTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVPG 92 (519)
Q Consensus 13 k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v~g 92 (519)
++|+|.|+ |.+|..+++.|.+.| .+|+++.++... .+++. ...+.++.|
T Consensus 8 ~~viIiG~-G~~G~~la~~L~~~g---~~v~vid~~~~~---~~~~~------------------------~~g~~~i~g 56 (140)
T 3fwz_A 8 NHALLVGY-GRVGSLLGEKLLASD---IPLVVIETSRTR---VDELR------------------------ERGVRAVLG 56 (140)
T ss_dssp SCEEEECC-SHHHHHHHHHHHHTT---CCEEEEESCHHH---HHHHH------------------------HTTCEEEES
T ss_pred CCEEEECc-CHHHHHHHHHHHHCC---CCEEEEECCHHH---HHHHH------------------------HcCCCEEEC
Confidence 57889985 999999999999988 567788776321 12221 145778999
Q ss_pred cCCCCCCCCChhhhHHH-HhcCccEEEEcCcc
Q 010075 93 DISSEDLGLKDSNLKEE-LWNELDIMVNSAAI 123 (519)
Q Consensus 93 Dl~~~~lgls~~~~~~~-l~~~vdiViH~Aa~ 123 (519)
|.++ .+.++. -.++.|+||-+...
T Consensus 57 d~~~-------~~~l~~a~i~~ad~vi~~~~~ 81 (140)
T 3fwz_A 57 NAAN-------EEIMQLAHLECAKWLILTIPN 81 (140)
T ss_dssp CTTS-------HHHHHHTTGGGCSEEEECCSC
T ss_pred CCCC-------HHHHHhcCcccCCEEEEECCC
Confidence 9994 443323 24678999877543
|
| >1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A | Back alignment and structure |
|---|
Probab=94.93 E-value=0.12 Score=49.47 Aligned_cols=118 Identities=11% Similarity=0.045 Sum_probs=69.7
Q ss_pred hhhcCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcc----------------cHHHHHHHHHhhhhhHHH
Q 010075 7 VEFLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADID----------------SAALRFQNEVLAKDVFNV 70 (519)
Q Consensus 7 ~~~~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~----------------~~~~rl~~~~~~~~~f~~ 70 (519)
++-+++++|+|.|+ |.+|+.+++.|.+.| |.+|.++.+..-.. ...+.+ -++
T Consensus 23 q~~l~~~~VlvvG~-GglG~~va~~La~~G--vg~i~lvD~d~v~~sNL~Rq~l~~~~diG~~Ka~~~---------~~~ 90 (251)
T 1zud_1 23 QQKLLDSQVLIIGL-GGLGTPAALYLAGAG--VGTLVLADDDDVHLSNLQRQILFTTEDIDRPKSQVS---------QQR 90 (251)
T ss_dssp HHHHHTCEEEEECC-STTHHHHHHHHHHTT--CSEEEEECCCBCCGGGTTTCTTCCGGGTTSBHHHHH---------HHH
T ss_pred HHHHhcCcEEEEcc-CHHHHHHHHHHHHcC--CCeEEEEeCCCcccccCCCCccCChhhCCCHHHHHH---------HHH
Confidence 34567899999997 559999999999987 57888875543111 111111 123
Q ss_pred HHhhhccccccccCCceEEEeccCCCCCCCCChhhhHHHHhcCccEEEEcCccCCccccHHHHHHHhHHHHHHHHHHHHh
Q 010075 71 LKEKWGTRLNSFISEKITFVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKFDERYDVAFGINTLGVIHLVNFAKK 150 (519)
Q Consensus 71 l~~~~~~~~~~~~~~~v~~v~gDl~~~~lgls~~~~~~~l~~~vdiViH~Aa~v~f~~~~~~~~~~Nv~gt~~ll~~a~~ 150 (519)
+++..| .-+++.+..+++ ++.. ..++++.|+||.+... .+ .-..+-+.|.+
T Consensus 91 l~~~np-------~~~v~~~~~~~~-------~~~~-~~~~~~~DvVi~~~d~------~~--------~r~~l~~~~~~ 141 (251)
T 1zud_1 91 LTQLNP-------DIQLTALQQRLT-------GEAL-KDAVARADVVLDCTDN------MA--------TRQEINAACVA 141 (251)
T ss_dssp HHHHCT-------TSEEEEECSCCC-------HHHH-HHHHHHCSEEEECCSS------HH--------HHHHHHHHHHH
T ss_pred HHHHCC-------CCEEEEEeccCC-------HHHH-HHHHhcCCEEEECCCC------HH--------HHHHHHHHHHH
Confidence 333332 235666666665 4443 3667789999988532 11 11234455665
Q ss_pred ccCCceEEEEecceeec
Q 010075 151 CVKLKVFVHVSTAYVAG 167 (519)
Q Consensus 151 ~~~l~~~V~vSTa~v~~ 167 (519)
. + +.+|+.++....|
T Consensus 142 ~-~-~p~i~~~~~g~~G 156 (251)
T 1zud_1 142 L-N-TPLITASAVGFGG 156 (251)
T ss_dssp T-T-CCEEEEEEEBTEE
T ss_pred h-C-CCEEEEeccccce
Confidence 3 3 4577776654444
|
| >3vku_A L-LDH, L-lactate dehydrogenase; rossmann fold, NADH binding, oxidoreductase; 1.96A {Lactobacillus casei} PDB: 2zqz_A 2zqy_A 3vkv_A* 1llc_A* | Back alignment and structure |
|---|
Probab=94.85 E-value=0.22 Score=49.49 Aligned_cols=107 Identities=10% Similarity=0.047 Sum_probs=57.9
Q ss_pred CCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEE
Q 010075 11 ENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFV 90 (519)
Q Consensus 11 ~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v 90 (519)
.+++|.|+|| |.+|..++..|+..+. +.+|.++.+.... .+-...++.+. ..+ ...+...
T Consensus 8 ~~~kV~ViGa-G~vG~~~a~~l~~~~~-~~el~l~D~~~~k---~~g~a~DL~~~--------------~~~-~~~~~i~ 67 (326)
T 3vku_A 8 DHQKVILVGD-GAVGSSYAYAMVLQGI-AQEIGIVDIFKDK---TKGDAIDLEDA--------------LPF-TSPKKIY 67 (326)
T ss_dssp CCCEEEEECC-SHHHHHHHHHHHHHTC-CSEEEEECSCHHH---HHHHHHHHHTT--------------GGG-SCCCEEE
T ss_pred CCCEEEEECC-CHHHHHHHHHHHhCCC-CCeEEEEeCChHH---HHHHHhhHhhh--------------hhh-cCCcEEE
Confidence 4679999996 9999999999998763 3578888774211 11111111110 001 1233333
Q ss_pred eccCCCCCCCCChhhhHHHHhcCccEEEEcCccCCc-cccHHHHHHHhHHHHHHHHHHHHhc
Q 010075 91 PGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF-DERYDVAFGINTLGVIHLVNFAKKC 151 (519)
Q Consensus 91 ~gDl~~~~lgls~~~~~~~l~~~vdiViH~Aa~v~f-~~~~~~~~~~Nv~gt~~ll~~a~~~ 151 (519)
.+|. ..+.+.|+||++|+..+- .+.....++.|+.-.+.+.+.+.+.
T Consensus 68 ~~~~--------------~a~~~aDiVvi~ag~~~kpG~tR~dL~~~N~~I~~~i~~~i~~~ 115 (326)
T 3vku_A 68 SAEY--------------SDAKDADLVVITAGAPQKPGETRLDLVNKNLKILKSIVDPIVDS 115 (326)
T ss_dssp ECCG--------------GGGTTCSEEEECCCCC----------------CHHHHHHHHHTT
T ss_pred ECcH--------------HHhcCCCEEEECCCCCCCCCchHHHHHHHHHHHHHHHHHHHHhc
Confidence 3321 235689999999997532 3445566888999999999888775
|
| >3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A* | Back alignment and structure |
|---|
Probab=94.85 E-value=0.5 Score=46.90 Aligned_cols=113 Identities=13% Similarity=0.075 Sum_probs=70.6
Q ss_pred CCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEEe
Q 010075 12 NKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVP 91 (519)
Q Consensus 12 ~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v~ 91 (519)
.++|.|+|+ |.+|..++..|+..+. +.+|.++.+.... .+...-++.+ ..| +....+....
T Consensus 5 ~~kI~ViGa-G~vG~~~a~~l~~~~~-~~~l~l~D~~~~k---~~g~a~DL~~---------~~~-----~~~~~v~i~~ 65 (326)
T 3pqe_A 5 VNKVALIGA-GFVGSSYAFALINQGI-TDELVVIDVNKEK---AMGDVMDLNH---------GKA-----FAPQPVKTSY 65 (326)
T ss_dssp CCEEEEECC-SHHHHHHHHHHHHHTC-CSEEEEECSCHHH---HHHHHHHHHH---------TGG-----GSSSCCEEEE
T ss_pred CCEEEEECC-CHHHHHHHHHHHhCCC-CceEEEEecchHH---HHHHHHHHHh---------ccc-----cccCCeEEEe
Confidence 578999996 9999999999998763 3578888774211 1111101111 011 1112333333
Q ss_pred ccCCCCCCCCChhhhHHHHhcCccEEEEcCccCCc-cccHHHHHHHhHHHHHHHHHHHHhccCCceEE
Q 010075 92 GDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF-DERYDVAFGINTLGVIHLVNFAKKCVKLKVFV 158 (519)
Q Consensus 92 gDl~~~~lgls~~~~~~~l~~~vdiViH~Aa~v~f-~~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V 158 (519)
+|. ..+.+.|+||.+|+..+- .+.-...+..|+...+.+.+.+.+. ....++
T Consensus 66 ~~~--------------~a~~~aDvVvi~ag~p~kpG~~R~dL~~~N~~Iv~~i~~~I~~~-~p~a~v 118 (326)
T 3pqe_A 66 GTY--------------EDCKDADIVCICAGANQKPGETRLELVEKNLKIFKGIVSEVMAS-GFDGIF 118 (326)
T ss_dssp ECG--------------GGGTTCSEEEECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHT-TCCSEE
T ss_pred CcH--------------HHhCCCCEEEEecccCCCCCccHHHHHHHHHHHHHHHHHHHHHh-cCCeEE
Confidence 321 235689999999997542 3456677899999999999988875 334343
|
| >3nep_X Malate dehydrogenase; halophIle, molecular adpatation, NAD, oxidoreductase, tricarboxylic acid cycle; 1.55A {Salinibacter ruber} | Back alignment and structure |
|---|
Probab=94.78 E-value=0.39 Score=47.41 Aligned_cols=113 Identities=12% Similarity=0.024 Sum_probs=67.6
Q ss_pred CEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEEec
Q 010075 13 KTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVPG 92 (519)
Q Consensus 13 k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v~g 92 (519)
|+|.|+|| |.+|..++..|+..+. +.+|.++.+........ ..++.+...| ....+.+...
T Consensus 1 Mkv~ViGa-G~vG~~~a~~l~~~~~-~~el~l~D~~~~k~~g~---a~DL~~~~~~--------------~~~~~~v~~~ 61 (314)
T 3nep_X 1 MKVTVIGA-GNVGATVAECVARQDV-AKEVVMVDIKDGMPQGK---ALDMRESSPI--------------HGFDTRVTGT 61 (314)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHHTC-SSEEEEECSSTTHHHHH---HHHHHHHHHH--------------HTCCCEEEEE
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCC-CCEEEEEeCchHHHHHH---HHHHhccccc--------------cCCCcEEEEC
Confidence 57999996 9999999999998763 45888888876432111 1112111000 0112222211
Q ss_pred cCCCCCCCCChhhhHHHHhcCccEEEEcCccCCc-cccHHHHHHHhHHHHHHHHHHHHhccCCceEE
Q 010075 93 DISSEDLGLKDSNLKEELWNELDIMVNSAAITKF-DERYDVAFGINTLGVIHLVNFAKKCVKLKVFV 158 (519)
Q Consensus 93 Dl~~~~lgls~~~~~~~l~~~vdiViH~Aa~v~f-~~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V 158 (519)
|.. ..+.+.|+||-+|+..+- ...-...+..|+.-.+.+.+.+.+. ....++
T Consensus 62 ~~~-------------~a~~~aDvVii~ag~~~kpG~~R~dl~~~N~~i~~~i~~~i~~~-~p~a~v 114 (314)
T 3nep_X 62 NDY-------------GPTEDSDVCIITAGLPRSPGMSRDDLLAKNTEIVGGVTEQFVEG-SPDSTI 114 (314)
T ss_dssp SSS-------------GGGTTCSEEEECCCC-------CHHHHHHHHHHHHHHHHHHHTT-CTTCEE
T ss_pred CCH-------------HHhCCCCEEEECCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHHh-CCCcEE
Confidence 211 335689999999987532 2344566889999999999988875 334443
|
| >2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A* | Back alignment and structure |
|---|
Probab=94.77 E-value=0.036 Score=55.39 Aligned_cols=37 Identities=16% Similarity=0.070 Sum_probs=31.7
Q ss_pred cCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecC
Q 010075 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAA 49 (519)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~ 49 (519)
-.|++|+|+||+|.+|..+++.+...| .+|++..|+.
T Consensus 154 ~~g~~vlI~Ga~g~iG~~~~~~a~~~G---~~V~~~~~~~ 190 (345)
T 2j3h_A 154 KEGETVYVSAASGAVGQLVGQLAKMMG---CYVVGSAGSK 190 (345)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHHHTT---CEEEEEESSH
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCC---CEEEEEeCCH
Confidence 357999999999999999999888877 5788888763
|
| >1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D | Back alignment and structure |
|---|
Probab=94.64 E-value=0.05 Score=53.26 Aligned_cols=38 Identities=8% Similarity=0.149 Sum_probs=32.2
Q ss_pred CCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCc
Q 010075 11 ENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADI 51 (519)
Q Consensus 11 ~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~ 51 (519)
.|++|+|+||+|.+|...+..+...| .+|++..|+...
T Consensus 125 ~g~~vlV~Ga~G~vG~~~~~~a~~~G---a~Vi~~~~~~~~ 162 (302)
T 1iz0_A 125 PGEKVLVQAAAGALGTAAVQVARAMG---LRVLAAASRPEK 162 (302)
T ss_dssp TTCEEEESSTTBHHHHHHHHHHHHTT---CEEEEEESSGGG
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCC---CEEEEEeCCHHH
Confidence 68999999999999999998887777 588999886543
|
| >2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A* | Back alignment and structure |
|---|
Probab=94.43 E-value=0.052 Score=54.74 Aligned_cols=37 Identities=14% Similarity=0.137 Sum_probs=31.4
Q ss_pred cCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecC
Q 010075 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAA 49 (519)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~ 49 (519)
-.|++|+|+||+|.+|..++..+...| .+|++..|+.
T Consensus 162 ~~g~~VlV~Ga~G~iG~~~~q~a~~~G---a~Vi~~~~~~ 198 (362)
T 2c0c_A 162 SEGKKVLVTAAAGGTGQFAMQLSKKAK---CHVIGTCSSD 198 (362)
T ss_dssp CTTCEEEETTTTBTTHHHHHHHHHHTT---CEEEEEESSH
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHhCC---CEEEEEECCH
Confidence 367899999999999999998888777 5788888763
|
| >4h7p_A Malate dehydrogenase; ssgcid, structural G seattle structural genomics center for infectious disease, oxidoreductase; 1.30A {Leishmania major} | Back alignment and structure |
|---|
Probab=94.37 E-value=0.43 Score=47.72 Aligned_cols=122 Identities=14% Similarity=0.092 Sum_probs=71.2
Q ss_pred hcCCCEEEEeCCccHHHHHHHHHHHHhCCCc-----cEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccc
Q 010075 9 FLENKTILVSGVTGFVAKVFIEKILRVQPNV-----KKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFI 83 (519)
Q Consensus 9 ~~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v-----~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~ 83 (519)
.++.-+|.|+||+|.||+.|+-.|.. ++-+ ..+.++...+... ..+-+.-++... .+
T Consensus 21 s~~~vKVaViGAaG~IG~~la~~la~-~~l~~~~~~~eL~L~Di~~~~~-~~~Gva~DL~~~---------------~~- 82 (345)
T 4h7p_A 21 SMSAVKVAVTGAAGQIGYALVPLIAR-GALLGPTTPVELRLLDIEPALK-ALAGVEAELEDC---------------AF- 82 (345)
T ss_dssp -CCCEEEEEESTTSHHHHHHHHHHHH-TTTTCTTCCEEEEEECCGGGHH-HHHHHHHHHHHT---------------TC-
T ss_pred CCCCCEEEEECcCcHHHHHHHHHHHh-ccccCCCCccEEEEECCCCccc-cchhhhhhhhhc---------------Cc-
Confidence 34556999999999999999987765 3322 2566666543211 111111011110 00
Q ss_pred CCceEEEeccCCCCCCCCChhhhHHHHhcCccEEEEcCccCC-ccccHHHHHHHhHHHHHHHHHHHHhccCCceEEEE
Q 010075 84 SEKITFVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITK-FDERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHV 160 (519)
Q Consensus 84 ~~~v~~v~gDl~~~~lgls~~~~~~~l~~~vdiViH~Aa~v~-f~~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V~v 160 (519)
.-....+.++ + . ...+.+.|+||=+||..+ -.....+.++.|..-.+.+.+...+......+|.+
T Consensus 83 ~~~~~~~~~~---------~-~--~~a~~~advVvi~aG~prkpGmtR~DLl~~Na~I~~~~~~~i~~~a~~~~~vlv 148 (345)
T 4h7p_A 83 PLLDKVVVTA---------D-P--RVAFDGVAIAIMCGAFPRKAGMERKDLLEMNARIFKEQGEAIAAVAASDCRVVV 148 (345)
T ss_dssp TTEEEEEEES---------C-H--HHHTTTCSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEE
T ss_pred cCCCcEEEcC---------C-h--HHHhCCCCEEEECCCCCCCCCCCHHHHHHHhHHHHHHHHHHHHhhccCceEEEE
Confidence 0111122211 1 1 245688999999999764 34667888999999999999988774223334433
|
| >3p7m_A Malate dehydrogenase; putative dehydrogenase, enzyme, structural genomics, center structural genomics of infectious diseases, csgid; 2.20A {Francisella tularensis} | Back alignment and structure |
|---|
Probab=94.30 E-value=0.7 Score=45.72 Aligned_cols=108 Identities=17% Similarity=0.134 Sum_probs=68.2
Q ss_pred cCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 010075 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (519)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (519)
|+.++|.|+|+ |.+|..++..|+..+. . +|+++.+...... ....++.+...+ ......+
T Consensus 3 m~~~kI~iiGa-G~vG~~~a~~l~~~~~-~-~v~l~Di~~~~~~---g~a~dL~~~~~~--------------~~~~~~v 62 (321)
T 3p7m_A 3 MARKKITLVGA-GNIGGTLAHLALIKQL-G-DVVLFDIAQGMPN---GKALDLLQTCPI--------------EGVDFKV 62 (321)
T ss_dssp CCCCEEEEECC-SHHHHHHHHHHHHTTC-C-EEEEECSSSSHHH---HHHHHHHTTHHH--------------HTCCCCE
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHhCCC-c-eEEEEeCChHHHH---HHHHHHHhhhhh--------------cCCCcEE
Confidence 45689999994 9999999999988764 2 7888887754321 111112111000 0011112
Q ss_pred E-eccCCCCCCCCChhhhHHHHhcCccEEEEcCccCC-ccccHHHHHHHhHHHHHHHHHHHHhc
Q 010075 90 V-PGDISSEDLGLKDSNLKEELWNELDIMVNSAAITK-FDERYDVAFGINTLGVIHLVNFAKKC 151 (519)
Q Consensus 90 v-~gDl~~~~lgls~~~~~~~l~~~vdiViH~Aa~v~-f~~~~~~~~~~Nv~gt~~ll~~a~~~ 151 (519)
. ..| . +.+.+.|+||.+|+..+ ......+.+..|+...+.+.+.+.+.
T Consensus 63 ~~t~d------------~--~a~~~aDvVIi~ag~p~k~G~~R~dl~~~N~~i~~~i~~~i~~~ 112 (321)
T 3p7m_A 63 RGTND------------Y--KDLENSDVVIVTAGVPRKPGMSRDDLLGINIKVMQTVGEGIKHN 112 (321)
T ss_dssp EEESC------------G--GGGTTCSEEEECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEcCC------------H--HHHCCCCEEEEcCCcCCCCCCCHHHHHHHhHHHHHHHHHHHHHH
Confidence 1 111 1 34568999999998753 23455667889999999999988776
|
| >2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A* | Back alignment and structure |
|---|
Probab=94.29 E-value=0.099 Score=52.69 Aligned_cols=34 Identities=18% Similarity=0.286 Sum_probs=30.4
Q ss_pred CCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecC
Q 010075 12 NKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAA 49 (519)
Q Consensus 12 ~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~ 49 (519)
|++|+|+|| |.+|..++..+...| .+|++..|+.
T Consensus 181 g~~VlV~Ga-G~vG~~~~q~a~~~G---a~Vi~~~~~~ 214 (366)
T 2cdc_A 181 CRKVLVVGT-GPIGVLFTLLFRTYG---LEVWMANRRE 214 (366)
T ss_dssp TCEEEEESC-HHHHHHHHHHHHHHT---CEEEEEESSC
T ss_pred CCEEEEECC-CHHHHHHHHHHHhCC---CEEEEEeCCc
Confidence 899999999 999999999888877 5889998875
|
| >1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5 | Back alignment and structure |
|---|
Probab=94.24 E-value=0.061 Score=52.00 Aligned_cols=36 Identities=17% Similarity=0.200 Sum_probs=31.3
Q ss_pred cCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecC
Q 010075 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAA 49 (519)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~ 49 (519)
+++++|+|+|+ |.+|+.++..|++.| .+|++..|+.
T Consensus 117 l~~k~vlViGa-Gg~g~a~a~~L~~~G---~~V~v~~R~~ 152 (271)
T 1nyt_A 117 RPGLRILLIGA-GGASRGVLLPLLSLD---CAVTITNRTV 152 (271)
T ss_dssp CTTCEEEEECC-SHHHHHHHHHHHHTT---CEEEEECSSH
T ss_pred cCCCEEEEECC-cHHHHHHHHHHHHcC---CEEEEEECCH
Confidence 46899999998 779999999999988 6788888864
|
| >3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti} | Back alignment and structure |
|---|
Probab=94.22 E-value=0.12 Score=51.62 Aligned_cols=37 Identities=14% Similarity=0.130 Sum_probs=31.3
Q ss_pred CCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCc
Q 010075 12 NKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADI 51 (519)
Q Consensus 12 ~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~ 51 (519)
+++|+|+||+|.+|...+..+...| .+|++..++...
T Consensus 165 ~~~vli~gg~g~vG~~a~qla~~~G---a~Vi~~~~~~~~ 201 (349)
T 3pi7_A 165 EKAFVMTAGASQLCKLIIGLAKEEG---FRPIVTVRRDEQ 201 (349)
T ss_dssp CSEEEESSTTSHHHHHHHHHHHHHT---CEEEEEESCGGG
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCC---CEEEEEeCCHHH
Confidence 3899999999999999998888877 588998886543
|
| >2ph5_A Homospermidine synthase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: NAD; 2.50A {Legionella pneumophila subsp} | Back alignment and structure |
|---|
Probab=94.20 E-value=0.15 Score=53.13 Aligned_cols=101 Identities=11% Similarity=0.195 Sum_probs=64.6
Q ss_pred CCEEEEeCCccHHHHHHHHHHHHhCCCc--cEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 010075 12 NKTILVSGVTGFVAKVFIEKILRVQPNV--KKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (519)
Q Consensus 12 ~k~VlITGaTGFlG~~Lv~~LL~~g~~v--~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (519)
.++|+|.| .|.||+.++.+|.+.. ++ .+|.+....+...+..+. .++.+
T Consensus 13 ~~rVlIIG-aGgVG~~va~lla~~~-dv~~~~I~vaD~~~~~~~~~~~---------------------------~g~~~ 63 (480)
T 2ph5_A 13 KNRFVILG-FGCVGQALMPLIFEKF-DIKPSQVTIIAAEGTKVDVAQQ---------------------------YGVSF 63 (480)
T ss_dssp CSCEEEEC-CSHHHHHHHHHHHHHB-CCCGGGEEEEESSCCSCCHHHH---------------------------HTCEE
T ss_pred CCCEEEEC-cCHHHHHHHHHHHhCC-CCceeEEEEeccchhhhhHHhh---------------------------cCCce
Confidence 36799999 8999999999999874 44 477777666554433221 13456
Q ss_pred EeccCCCCCCCCChhhhHHHHhcCccEEEEcCccCCccccHHHHHHHhHHHHHHHHHHHHhccCCceEEEEecce
Q 010075 90 VPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKFDERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAY 164 (519)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~~~vdiViH~Aa~v~f~~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V~vSTa~ 164 (519)
+..+++..+ ..+.++.++++.|+|||++-.. ....++++|.+. + +.|++|+-
T Consensus 64 ~~~~Vdadn----v~~~l~aLl~~~DvVIN~s~~~---------------~~l~Im~aclea-G---v~YlDTa~ 115 (480)
T 2ph5_A 64 KLQQITPQN----YLEVIGSTLEENDFLIDVSIGI---------------SSLALIILCNQK-G---ALYINAAT 115 (480)
T ss_dssp EECCCCTTT----HHHHTGGGCCTTCEEEECCSSS---------------CHHHHHHHHHHH-T---CEEEESSC
T ss_pred eEEeccchh----HHHHHHHHhcCCCEEEECCccc---------------cCHHHHHHHHHc-C---CCEEECCC
Confidence 666666321 1122334555569999965332 123478899886 3 67888884
|
| >2ozp_A N-acetyl-gamma-glutamyl-phosphate reductase; amino acid biosynthesis, structural genomics, riken structur genomics/proteomics initiative; 2.01A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=94.05 E-value=0.071 Score=53.53 Aligned_cols=34 Identities=21% Similarity=0.410 Sum_probs=27.8
Q ss_pred CEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEec
Q 010075 13 KTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRA 48 (519)
Q Consensus 13 k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~ 48 (519)
++|.|.||||.+|+.+++.|+++ |++ +|..+.+.
T Consensus 5 ~kV~IiGAtG~iG~~llr~L~~~-p~~-elv~v~s~ 38 (345)
T 2ozp_A 5 KTLSIVGASGYAGGEFLRLALSH-PYL-EVKQVTSR 38 (345)
T ss_dssp EEEEEETTTSHHHHHHHHHHHTC-TTE-EEEEEBCS
T ss_pred CEEEEECCCCHHHHHHHHHHHcC-CCc-EEEEEECc
Confidence 68999999999999999998864 554 66666664
|
| >3pwk_A Aspartate-semialdehyde dehydrogenase; NADP binding, oxidoreductase-oxidoreductase I complex; HET: 25A L14; 1.50A {Streptococcus pneumoniae} PDB: 2gyy_A* 2gz2_A* 2gz3_A* 2gz1_A* 3pws_A* 3pyl_A 3pyx_A* 3pzb_A* 3q11_A* 3q1l_A | Back alignment and structure |
|---|
Probab=93.96 E-value=0.035 Score=56.13 Aligned_cols=34 Identities=24% Similarity=0.312 Sum_probs=26.7
Q ss_pred CEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEE
Q 010075 13 KTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFV 46 (519)
Q Consensus 13 k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~Lv 46 (519)
.+|+|.||||++|..|++.|.+++....++..+.
T Consensus 3 ~kVaIvGATG~vG~eLlrlL~~~~~p~~el~~~a 36 (366)
T 3pwk_A 3 YTVAVVGATGAVGAQMIKMLEESTLPIDKIRYLA 36 (366)
T ss_dssp EEEEEETTTSHHHHHHHHHHHTCCCCEEEEEEEE
T ss_pred cEEEEECCCChHHHHHHHHHhcCCCCcEEEEEEE
Confidence 5899999999999999998887543334666665
|
| >3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A | Back alignment and structure |
|---|
Probab=93.96 E-value=0.096 Score=51.02 Aligned_cols=37 Identities=14% Similarity=0.108 Sum_probs=32.0
Q ss_pred cCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecC
Q 010075 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAA 49 (519)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~ 49 (519)
+++++++|+|| |.+|+.++..|.+.|. .+|++..|+.
T Consensus 125 l~~k~vlVlGa-GG~g~aia~~L~~~G~--~~v~i~~R~~ 161 (283)
T 3jyo_A 125 AKLDSVVQVGA-GGVGNAVAYALVTHGV--QKLQVADLDT 161 (283)
T ss_dssp CCCSEEEEECC-SHHHHHHHHHHHHTTC--SEEEEECSSH
T ss_pred cCCCEEEEECC-cHHHHHHHHHHHHCCC--CEEEEEECCH
Confidence 57899999997 8899999999999863 5789988874
|
| >2x0j_A Malate dehydrogenase; oxidoreductase, hyperthermophilic, tricarboxylic acid cycle; HET: ENA; 2.79A {Archaeoglobus fulgidus dsm 4304} PDB: 2x0i_A* | Back alignment and structure |
|---|
Probab=93.86 E-value=0.75 Score=44.90 Aligned_cols=115 Identities=15% Similarity=0.050 Sum_probs=71.4
Q ss_pred CEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEEec
Q 010075 13 KTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVPG 92 (519)
Q Consensus 13 k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v~g 92 (519)
|+|.|+|| |.+|+.++-.|+.++ -+.++.++...+..... +-+ ++.+... +.......+.+
T Consensus 1 MKV~IiGa-G~VG~~~a~~l~~~~-~~~el~L~Di~~~~~~G-~a~--DL~h~~~--------------~~~~~~~i~~~ 61 (294)
T 2x0j_A 1 MKLGFVGA-GRVGSTSAFTCLLNL-DVDEIALVDIAEDLAVG-EAM--DLAHAAA--------------GIDKYPKIVGG 61 (294)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHHS-CCSEEEEECSSHHHHHH-HHH--HHHHHHG--------------GGTCCCEEEEE
T ss_pred CEEEEECc-CHHHHHHHHHHHhCC-CCCEEEEEeCCCCcchh-hhh--hhhcccc--------------cCCCCCeEecC
Confidence 57999995 999999999888764 55788888765321111 111 1111100 01112222221
Q ss_pred cCCCCCCCCChhhhHHHHhcCccEEEEcCccCC-ccccHHHHHHHhHHHHHHHHHHHHhccCCceEEEE
Q 010075 93 DISSEDLGLKDSNLKEELWNELDIMVNSAAITK-FDERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHV 160 (519)
Q Consensus 93 Dl~~~~lgls~~~~~~~l~~~vdiViH~Aa~v~-f~~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V~v 160 (519)
+ +. +.+++.|+||-.||..+ ....-.+.+..|..-.+.+.+.+.+. ..+.++.+
T Consensus 62 ~-----------d~--~~~~~aDvVvitAG~prkpGmtR~dLl~~Na~I~~~i~~~i~~~-~p~aivlv 116 (294)
T 2x0j_A 62 A-----------DY--SLLKGSEIIVVTAGLARKPGMTRLDLAHKNAGIIKDIAKKIVEN-APESKILV 116 (294)
T ss_dssp S-----------CG--GGGTTCSEEEECCCCCCCSSSCHHHHHHHHHHHHHHHHHHHHTT-STTCEEEE
T ss_pred C-----------CH--HHhCCCCEEEEecCCCCCCCCchHHHHHHHHHHHHHHHHHHHhc-CCceEEEE
Confidence 1 11 23468999999999765 34677788999999999999988875 44444443
|
| >1y6j_A L-lactate dehydrogenase; southeast collaboratory for structural genomics, secsg, protein struc initiative, PSI, oxidoreductase; 3.01A {Clostridium thermocellum} SCOP: c.2.1.5 d.162.1.1 | Back alignment and structure |
|---|
Probab=93.80 E-value=0.14 Score=50.63 Aligned_cols=116 Identities=16% Similarity=0.122 Sum_probs=68.9
Q ss_pred CCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEEe
Q 010075 12 NKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVP 91 (519)
Q Consensus 12 ~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v~ 91 (519)
.++|.|+|| |.+|..++-.|+..+. +.+|.++........... .++.+. . .+ ...+.+..
T Consensus 7 ~~KI~IiGa-G~vG~~~a~~l~~~~~-~~ev~L~Di~~~~~~g~~---~dl~~~-------------~-~~-~~~~~i~~ 66 (318)
T 1y6j_A 7 RSKVAIIGA-GFVGASAAFTMALRQT-ANELVLIDVFKEKAIGEA---MDINHG-------------L-PF-MGQMSLYA 66 (318)
T ss_dssp CCCEEEECC-SHHHHHHHHHHHHTTC-SSEEEEECCC---CCHHH---HHHTTS-------------C-CC-TTCEEEC-
T ss_pred CCEEEEECC-CHHHHHHHHHHHhCCC-CCEEEEEeCChHHHHHHH---HHHHHh-------------H-Hh-cCCeEEEE
Confidence 468999998 9999999999988753 468888887653332211 011000 0 00 11222221
Q ss_pred ccCCCCCCCCChhhhHHHHhcCccEEEEcCccCC-ccccHHHHHHHhHHHHHHHHHHHHhccCCceEEEEec
Q 010075 92 GDISSEDLGLKDSNLKEELWNELDIMVNSAAITK-FDERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVST 162 (519)
Q Consensus 92 gDl~~~~lgls~~~~~~~l~~~vdiViH~Aa~v~-f~~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V~vST 162 (519)
+ + . ..+.+.|+||.+|+... ...........|+...+.+.+.+.+. ....++.+.|
T Consensus 67 ~----------~--~--~a~~~aDvVii~~g~p~k~g~~r~dl~~~n~~i~~~i~~~i~~~-~p~a~viv~t 123 (318)
T 1y6j_A 67 G----------D--Y--SDVKDCDVIVVTAGANRKPGETRLDLAKKNVMIAKEVTQNIMKY-YNHGVILVVS 123 (318)
T ss_dssp -----------C--G--GGGTTCSEEEECCCC------CHHHHHHHHHHHHHHHHHHHHHH-CCSCEEEECS
T ss_pred C----------C--H--HHhCCCCEEEEcCCCCCCCCcCHHHHHHhhHHHHHHHHHHHHHh-CCCcEEEEec
Confidence 1 1 1 33578999999998753 23344566888999999999988875 4455555544
|
| >4f3y_A DHPR, dihydrodipicolinate reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Burkholderia thailandensis} | Back alignment and structure |
|---|
Probab=93.76 E-value=0.12 Score=49.89 Aligned_cols=38 Identities=21% Similarity=0.440 Sum_probs=28.4
Q ss_pred CCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecC
Q 010075 11 ENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAA 49 (519)
Q Consensus 11 ~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~ 49 (519)
+.++|.|.||+|.+|+.+++.+.+. +++.-|.++.|+.
T Consensus 6 ~mikV~V~Ga~G~MG~~i~~~l~~~-~~~eLv~~~d~~~ 43 (272)
T 4f3y_A 6 SSMKIAIAGASGRMGRMLIEAVLAA-PDATLVGALDRTG 43 (272)
T ss_dssp CCEEEEESSTTSHHHHHHHHHHHHC-TTEEEEEEBCCTT
T ss_pred cccEEEEECCCCHHHHHHHHHHHhC-CCCEEEEEEEecC
Confidence 3468999999999999999999874 6653334455553
|
| >1xyg_A Putative N-acetyl-gamma-glutamyl-phosphate reduct; structural genomics, protein structure initiative, CENT eukaryotic structural genomics; 2.19A {Arabidopsis thaliana} SCOP: c.2.1.3 d.81.1.1 PDB: 2q49_A 2cvo_A | Back alignment and structure |
|---|
Probab=93.76 E-value=0.084 Score=53.28 Aligned_cols=39 Identities=13% Similarity=0.261 Sum_probs=29.5
Q ss_pred hhcCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEec
Q 010075 8 EFLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRA 48 (519)
Q Consensus 8 ~~~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~ 48 (519)
..++.++|+|.||||.+|+.+++.|+++ |++ +|..+.+.
T Consensus 12 ~~M~~~kV~IiGAtG~iG~~llr~L~~~-p~~-elvai~~~ 50 (359)
T 1xyg_A 12 KPEKDIRIGLLGASGYTGAEIVRLLANH-PHF-QVTLMTAD 50 (359)
T ss_dssp ---CCEEEEEECCSSHHHHHHHHHHHTC-SSE-EEEEEBCS
T ss_pred ccccCcEEEEECcCCHHHHHHHHHHHcC-CCc-EEEEEeCc
Confidence 3455679999999999999999999874 665 66676654
|
| >3tz6_A Aspartate-semialdehyde dehydrogenase; asadh, ASD, ASA, amino-acid biosynthesis, diaminopimelate biosynthesis, lysine biosynthesis; HET: SO4; 1.95A {Mycobacterium tuberculosis} PDB: 3vos_A* 3kub_A 3llg_A | Back alignment and structure |
|---|
Probab=93.57 E-value=0.051 Score=54.49 Aligned_cols=35 Identities=20% Similarity=0.219 Sum_probs=26.8
Q ss_pred CCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEE
Q 010075 12 NKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFV 46 (519)
Q Consensus 12 ~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~Lv 46 (519)
|.+|.|.||||++|..|++.|.++.....++..+.
T Consensus 1 ~~~VaIvGatG~vG~el~~lL~~h~fp~~el~~~~ 35 (344)
T 3tz6_A 1 GLSIGIVGATGQVGQVMRTLLDERDFPASAVRFFA 35 (344)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHHTTCCEEEEEEEE
T ss_pred CCEEEEECCCChHHHHHHHHHHhCCCCceEEEEEE
Confidence 46899999999999999997777532334666665
|
| >2o7s_A DHQ-SDH PR, bifunctional 3-dehydroquinate dehydratase/shikima dehydrogenase; shikimate, NADPH, dehydroshikimate, bifunctional enzyme; HET: DHK TLA NAP; 1.78A {Arabidopsis thaliana} PDB: 2o7q_A* 2gpt_A* | Back alignment and structure |
|---|
Probab=93.53 E-value=0.047 Score=58.08 Aligned_cols=36 Identities=25% Similarity=0.244 Sum_probs=27.5
Q ss_pred cCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecC
Q 010075 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAA 49 (519)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~ 49 (519)
++|++++|||| |.+|++++..|++.| .+|++..|+.
T Consensus 362 l~~k~vlV~Ga-GGig~aia~~L~~~G---~~V~i~~R~~ 397 (523)
T 2o7s_A 362 LASKTVVVIGA-GGAGKALAYGAKEKG---AKVVIANRTY 397 (523)
T ss_dssp ----CEEEECC-SHHHHHHHHHHHHHC---C-CEEEESSH
T ss_pred cCCCEEEEECC-cHHHHHHHHHHHHCC---CEEEEEECCH
Confidence 57889999999 799999999999998 4678888863
|
| >2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A | Back alignment and structure |
|---|
Probab=93.48 E-value=0.21 Score=46.80 Aligned_cols=72 Identities=10% Similarity=0.079 Sum_probs=48.7
Q ss_pred CCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEE
Q 010075 11 ENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFV 90 (519)
Q Consensus 11 ~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v 90 (519)
..++|+|.|+ |.+|+.+++.|.+.+ . |+++.|+... .+++. ..+.++
T Consensus 8 ~~~~viI~G~-G~~G~~la~~L~~~g---~-v~vid~~~~~---~~~~~-------------------------~~~~~i 54 (234)
T 2aef_A 8 KSRHVVICGW-SESTLECLRELRGSE---V-FVLAEDENVR---KKVLR-------------------------SGANFV 54 (234)
T ss_dssp --CEEEEESC-CHHHHHHHHHSTTSE---E-EEEESCGGGH---HHHHH-------------------------TTCEEE
T ss_pred CCCEEEEECC-ChHHHHHHHHHHhCC---e-EEEEECCHHH---HHHHh-------------------------cCCeEE
Confidence 3578999997 999999999998876 4 6666665321 11110 347889
Q ss_pred eccCCCCCCCCChhhhHHHH-hcCccEEEEcCc
Q 010075 91 PGDISSEDLGLKDSNLKEEL-WNELDIMVNSAA 122 (519)
Q Consensus 91 ~gDl~~~~lgls~~~~~~~l-~~~vdiViH~Aa 122 (519)
.||.++ .+.++.. +++.|.||-+.+
T Consensus 55 ~gd~~~-------~~~l~~a~i~~ad~vi~~~~ 80 (234)
T 2aef_A 55 HGDPTR-------VSDLEKANVRGARAVIVDLE 80 (234)
T ss_dssp ESCTTC-------HHHHHHTTCTTCSEEEECCS
T ss_pred EcCCCC-------HHHHHhcCcchhcEEEEcCC
Confidence 999994 3433333 678999997754
|
| >3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans} | Back alignment and structure |
|---|
Probab=93.37 E-value=0.16 Score=50.59 Aligned_cols=34 Identities=24% Similarity=0.340 Sum_probs=28.9
Q ss_pred CCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEec
Q 010075 11 ENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRA 48 (519)
Q Consensus 11 ~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~ 48 (519)
.|++|||+||+|.+|...+..+...| .+|++. ++
T Consensus 150 ~g~~VlV~Ga~g~iG~~~~q~a~~~G---a~Vi~~-~~ 183 (343)
T 3gaz_A 150 DGQTVLIQGGGGGVGHVAIQIALARG---ARVFAT-AR 183 (343)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTT---CEEEEE-EC
T ss_pred CCCEEEEecCCCHHHHHHHHHHHHCC---CEEEEE-eC
Confidence 58899999999999999998888777 477877 44
|
| >3h8v_A Ubiquitin-like modifier-activating enzyme 5; rossman fold, ATP-binding, UBL conjugation pathway, transfer structural genomics consortium, SGC; HET: ATP; 2.00A {Homo sapiens} PDB: 3guc_A* | Back alignment and structure |
|---|
Probab=93.20 E-value=0.5 Score=46.06 Aligned_cols=95 Identities=17% Similarity=0.165 Sum_probs=55.8
Q ss_pred hhhcCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhh-----h----hHHHHHhhhcc
Q 010075 7 VEFLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAK-----D----VFNVLKEKWGT 77 (519)
Q Consensus 7 ~~~~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~-----~----~f~~l~~~~~~ 77 (519)
++-+++++|+|.|+ |.+|..+++.|.+.| |.+|.++.+..-..+-..|. ++.. + .-+++++-.|
T Consensus 31 q~kL~~~~VlVvGa-GGlGs~va~~La~aG--VG~i~lvD~D~Ve~sNL~Rq---~~~~~diG~~Ka~aa~~~L~~iNP- 103 (292)
T 3h8v_A 31 YEKIRTFAVAIVGV-GGVGSVTAEMLTRCG--IGKLLLFDYDKVELANMNRL---FFQPHQAGLSKVQAAEHTLRNINP- 103 (292)
T ss_dssp -CGGGGCEEEEECC-SHHHHHHHHHHHHHT--CSEEEEECCCBC---------------CCTTSBHHHHHHHHHHHHCT-
T ss_pred HHHHhCCeEEEECc-CHHHHHHHHHHHHcC--CCEEEEECCCccChhhcccc---cCChhhcCchHHHHHHHHHHhhCC-
Confidence 34567789999985 779999999999987 68888887765443333331 1110 0 1233444333
Q ss_pred ccccccCCceEEEeccCCCCCCCCChhhhHHHHh-----------cCccEEEEcC
Q 010075 78 RLNSFISEKITFVPGDISSEDLGLKDSNLKEELW-----------NELDIMVNSA 121 (519)
Q Consensus 78 ~~~~~~~~~v~~v~gDl~~~~lgls~~~~~~~l~-----------~~vdiViH~A 121 (519)
.-+++.+..+++. .+..+.++ +++|+||.+.
T Consensus 104 ------~v~v~~~~~~l~~-------~~~~~~~~~~~~~~~l~~~~~~DlVid~~ 145 (292)
T 3h8v_A 104 ------DVLFEVHNYNITT-------VENFQHFMDRISNGGLEEGKPVDLVLSCV 145 (292)
T ss_dssp ------TSEEEEECCCTTS-------HHHHHHHHHHHHHBSSSTTBCCSEEEECC
T ss_pred ------CcEEEEecccCCc-------HHHHHHHhhhhcccccccCCCCCEEEECC
Confidence 2467777777773 22222332 5899999875
|
| >3tl2_A Malate dehydrogenase; center for structural genomics of infectious diseases, csgid dehydrogenase, oxidoreductase, citric acid cycle; 1.70A {Bacillus anthracis} | Back alignment and structure |
|---|
Probab=93.20 E-value=0.9 Score=44.79 Aligned_cols=110 Identities=15% Similarity=0.076 Sum_probs=67.6
Q ss_pred CCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEE
Q 010075 11 ENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFV 90 (519)
Q Consensus 11 ~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v 90 (519)
+.++|.|.|+ |.+|..++..|+..+. .+|.++.+..... ..+-...++.+. .. ..+ ...++..
T Consensus 7 ~~~kv~ViGa-G~vG~~ia~~l~~~g~--~~v~l~D~~~~~~-~~~g~a~dl~~~-----~~-~~~------~~~~i~~- 69 (315)
T 3tl2_A 7 KRKKVSVIGA-GFTGATTAFLLAQKEL--ADVVLVDIPQLEN-PTKGKALDMLEA-----SP-VQG------FDANIIG- 69 (315)
T ss_dssp CCCEEEEECC-SHHHHHHHHHHHHTTC--CEEEEECCGGGHH-HHHHHHHHHHHH-----HH-HHT------CCCCEEE-
T ss_pred CCCEEEEECC-CHHHHHHHHHHHhCCC--CeEEEEeccchHH-HHHHhhhhHHHh-----hh-hcc------CCCEEEE-
Confidence 4579999996 9999999999998763 4788888863111 011111111111 00 000 0112221
Q ss_pred eccCCCCCCCCChhhhHHHHhcCccEEEEcCccCCc-cccHHHHHHHhHHHHHHHHHHHHhc
Q 010075 91 PGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF-DERYDVAFGINTLGVIHLVNFAKKC 151 (519)
Q Consensus 91 ~gDl~~~~lgls~~~~~~~l~~~vdiViH~Aa~v~f-~~~~~~~~~~Nv~gt~~ll~~a~~~ 151 (519)
..| . ..+.+.|+||-+|+..+- .....+.+..|+.-.+.+.+.+.+.
T Consensus 70 t~d------------~--~a~~~aDvVIiaag~p~kpg~~R~dl~~~N~~i~~~i~~~i~~~ 117 (315)
T 3tl2_A 70 TSD------------Y--ADTADSDVVVITAGIARKPGMSRDDLVATNSKIMKSITRDIAKH 117 (315)
T ss_dssp ESC------------G--GGGTTCSEEEECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cCC------------H--HHhCCCCEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHh
Confidence 111 1 335789999999987642 3456777899999999999888775
|
| >3uw3_A Aspartate-semialdehyde dehydrogenase; structural genomics, seattle structural genomics center for infectious disease (ssgcid); 1.55A {Burkholderia thailandensis} | Back alignment and structure |
|---|
Probab=93.18 E-value=0.34 Score=49.01 Aligned_cols=35 Identities=14% Similarity=0.267 Sum_probs=26.3
Q ss_pred CCEEEEeCCccHHHHHHHHHHHHhCCC-ccEEEEEE
Q 010075 12 NKTILVSGVTGFVAKVFIEKILRVQPN-VKKLYLFV 46 (519)
Q Consensus 12 ~k~VlITGaTGFlG~~Lv~~LL~~g~~-v~~V~~Lv 46 (519)
.++|.|.||||++|..|+++||...|. ..++..+.
T Consensus 4 ~~~VaIvGATG~vG~ellr~lL~~hp~~~~~l~~~s 39 (377)
T 3uw3_A 4 SMNVGLVGWRGMVGSVLMQRMQEEGDFDLIEPVFFS 39 (377)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTTGGGGSEEEEEE
T ss_pred CCEEEEECCCCHHHHHHHHHHHhhCCCCceEEEEEe
Confidence 468999999999999999966665552 24665554
|
| >1y8q_B Anthracycline-, ubiquitin-like 2 activating enzyme E1B; SUMO, heterodimer, UBL, ligase; HET: ATP; 2.25A {Homo sapiens} PDB: 1y8r_B* 3kyc_B* 3kyd_B* 2px9_A | Back alignment and structure |
|---|
Probab=93.13 E-value=0.28 Score=52.97 Aligned_cols=128 Identities=14% Similarity=0.120 Sum_probs=73.1
Q ss_pred hhhcCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHH----HHHHhh---hhhHHHHHhhhcccc
Q 010075 7 VEFLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRF----QNEVLA---KDVFNVLKEKWGTRL 79 (519)
Q Consensus 7 ~~~~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl----~~~~~~---~~~f~~l~~~~~~~~ 79 (519)
++-+++.+|+|.|+ |.+|..+++.|.+.| |++|.++....-..+-..|- .+.+-. ...-+++++..|
T Consensus 12 Q~kL~~s~VlVVGa-GGLGsevak~La~aG--VG~ItlvD~D~Ve~SNLnRQflf~~~dVGk~KAeaaa~~L~~iNP--- 85 (640)
T 1y8q_B 12 AEAVAGGRVLVVGA-GGIGCELLKNLVLTG--FSHIDLIDLDTIDVSNLNRQFLFQKKHVGRSKAQVAKESVLQFYP--- 85 (640)
T ss_dssp HHHHHHCEEEEECC-SHHHHHHHHHHHHHT--CCEEEEEECCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHTTCT---
T ss_pred HHHHhcCeEEEECc-CHHHHHHHHHHHHcC--CCeEEEecCCEEChhhcCCCcCCChhHcChHHHHHHHHHHHHHCC---
Confidence 45567789999996 779999999999987 57888887654222111110 000000 001133333333
Q ss_pred ccccCCceEEEeccCCCCCCCCChhhhHHHHhcCccEEEEcCccCCccccHHHHHHHhHHHHHHHHHHHHhccCCceEEE
Q 010075 80 NSFISEKITFVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKFDERYDVAFGINTLGVIHLVNFAKKCVKLKVFVH 159 (519)
Q Consensus 80 ~~~~~~~v~~v~gDl~~~~lgls~~~~~~~l~~~vdiViH~Aa~v~f~~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V~ 159 (519)
.-+++.+..+++..+ ....++.++|+||.+... +..-..+-++|.+. + ..+|+
T Consensus 86 ----~v~V~a~~~~i~~~~-------~~~~~~~~~DlVvda~Dn--------------~~aR~~ln~~c~~~-~-iPlI~ 138 (640)
T 1y8q_B 86 ----KANIVAYHDSIMNPD-------YNVEFFRQFILVMNALDN--------------RAARNHVNRMCLAA-D-VPLIE 138 (640)
T ss_dssp ----TCEEEEEESCTTSTT-------SCHHHHTTCSEEEECCSC--------------HHHHHHHHHHHHHH-T-CCEEE
T ss_pred ----CCeEEEEecccchhh-------hhHhhhcCCCEEEECCCC--------------HHHHHHHHHHHHHc-C-CCEEE
Confidence 246778888887422 112566889999998432 12223344566654 3 34676
Q ss_pred Eecceeec
Q 010075 160 VSTAYVAG 167 (519)
Q Consensus 160 vSTa~v~~ 167 (519)
.++....|
T Consensus 139 ~g~~G~~G 146 (640)
T 1y8q_B 139 SGTAGYLG 146 (640)
T ss_dssp EEEETTEE
T ss_pred EEEecccc
Confidence 66654333
|
| >1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A | Back alignment and structure |
|---|
Probab=93.07 E-value=0.13 Score=51.32 Aligned_cols=36 Identities=8% Similarity=0.064 Sum_probs=29.8
Q ss_pred cCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecC
Q 010075 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAA 49 (519)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~ 49 (519)
-.|++|+|+|| |.+|..++..+...| .+|++..|+.
T Consensus 163 ~~g~~VlV~Ga-G~vG~~~~~~a~~~G---a~Vi~~~~~~ 198 (339)
T 1rjw_A 163 KPGEWVAIYGI-GGLGHVAVQYAKAMG---LNVVAVDIGD 198 (339)
T ss_dssp CTTCEEEEECC-STTHHHHHHHHHHTT---CEEEEECSCH
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHHcC---CEEEEEeCCH
Confidence 36899999999 669999998887777 5888888763
|
| >2xxj_A L-LDH, L-lactate dehydrogenase; oxidoreductase, hyperthermophIle; HET: NAD; 1.964A {Thermus thermophilus} PDB: 2xxb_A* 3zzn_A* 2v7p_A* 2e37_A* 2v6m_A* 2xxe_A 4a73_A | Back alignment and structure |
|---|
Probab=93.05 E-value=1.6 Score=42.81 Aligned_cols=111 Identities=12% Similarity=0.085 Sum_probs=68.8
Q ss_pred CEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEEec
Q 010075 13 KTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVPG 92 (519)
Q Consensus 13 k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v~g 92 (519)
++|.|+|| |.+|..++-.|+..+. +.+|.++.+.... .+....++.+. . .+ ...+.+..+
T Consensus 1 ~KI~IiGa-G~vG~~~a~~l~~~~~-~~el~L~Di~~~k---~~g~a~dl~~~---------~-----~~-~~~~~v~~~ 60 (310)
T 2xxj_A 1 MKVGIVGS-GMVGSATAYALALLGV-AREVVLVDLDRKL---AQAHAEDILHA---------T-----PF-AHPVWVWAG 60 (310)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTC-CSEEEEECSSHHH---HHHHHHHHHTT---------G-----GG-SCCCEEEEC
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCC-CCEEEEEeCChhH---HHHHHHHHHHh---------H-----hh-cCCeEEEEC
Confidence 57999998 9999999999888653 5788888875311 11111111110 0 00 123333322
Q ss_pred cCCCCCCCCChhhhHHHHhcCccEEEEcCccCC-ccccHHHHHHHhHHHHHHHHHHHHhccCCceEE
Q 010075 93 DISSEDLGLKDSNLKEELWNELDIMVNSAAITK-FDERYDVAFGINTLGVIHLVNFAKKCVKLKVFV 158 (519)
Q Consensus 93 Dl~~~~lgls~~~~~~~l~~~vdiViH~Aa~v~-f~~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V 158 (519)
| . ..+.+.|+||.+|+... ...........|+...+.+.+.+.+. ....++
T Consensus 61 ~---------~-----~a~~~aD~Vii~ag~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~-~p~a~i 112 (310)
T 2xxj_A 61 S---------Y-----GDLEGARAVVLAAGVAQRPGETRLQLLDRNAQVFAQVVPRVLEA-APEAVL 112 (310)
T ss_dssp C---------G-----GGGTTEEEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHH-CTTCEE
T ss_pred C---------H-----HHhCCCCEEEECCCCCCCCCcCHHHHHHhhHHHHHHHHHHHHHH-CCCcEE
Confidence 1 1 23578999999998754 23445566888999999999888776 344443
|
| >2r00_A Aspartate-semialdehyde dehydrogenase; conformational change, half-OF-sites-reactivity, protein evolution, sequence homology; HET: HTI; 2.03A {Vibrio cholerae} PDB: 2qz9_A* 2r00_C* | Back alignment and structure |
|---|
Probab=93.03 E-value=0.17 Score=50.59 Aligned_cols=35 Identities=23% Similarity=0.430 Sum_probs=28.2
Q ss_pred CCEEEEeCCccHHHHHHHHHHHHhC-CCccEEEEEEe
Q 010075 12 NKTILVSGVTGFVAKVFIEKILRVQ-PNVKKLYLFVR 47 (519)
Q Consensus 12 ~k~VlITGaTGFlG~~Lv~~LL~~g-~~v~~V~~LvR 47 (519)
.++|.|.||||.+|+.+++.|+++. |++ +|.++..
T Consensus 3 ~~kV~I~GAtG~iG~~llr~L~~~~~p~~-elv~i~s 38 (336)
T 2r00_A 3 QFNVAIFGATGAVGETMLEVLQEREFPVD-ELFLLAS 38 (336)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHHTTCCEE-EEEEEEC
T ss_pred ccEEEEECCCCHHHHHHHHHHhcCCCCCE-EEEEEEC
Confidence 3689999999999999999998864 554 6666663
|
| >4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A | Back alignment and structure |
|---|
Probab=92.87 E-value=0.11 Score=53.81 Aligned_cols=37 Identities=14% Similarity=0.119 Sum_probs=30.8
Q ss_pred hcCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEec
Q 010075 9 FLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRA 48 (519)
Q Consensus 9 ~~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~ 48 (519)
.-.|++|+|+||+|.+|...+..+...| .+|++.+++
T Consensus 218 ~~~g~~VlV~GasG~iG~~a~qla~~~G---a~vi~~~~~ 254 (447)
T 4a0s_A 218 MKQGDIVLIWGASGGLGSYAIQFVKNGG---GIPVAVVSS 254 (447)
T ss_dssp CCTTCEEEETTTTSHHHHHHHHHHHHTT---CEEEEEESS
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHcC---CEEEEEeCC
Confidence 3468999999999999999988888777 577888764
|
| >1oju_A MDH, malate dehydrogenase; hyperthermophilic, oxidoreductase; HET: ENA; 2.79A {Archaeoglobus fulgidus} PDB: 1ojs_A* 2x0i_A* 2x0j_A* | Back alignment and structure |
|---|
Probab=92.77 E-value=1.7 Score=42.40 Aligned_cols=113 Identities=15% Similarity=0.060 Sum_probs=69.1
Q ss_pred CEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEEec
Q 010075 13 KTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVPG 92 (519)
Q Consensus 13 k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v~g 92 (519)
|+|.|+|| |.+|..++..|+..+. +.+|.+..+.+...... .+ ++ ....+. ......+...
T Consensus 1 MkI~ViGa-G~vG~~la~~l~~~~~-~~~v~L~D~~~~~~~g~-~~--dl---------~~~~~~-----~~~~~~i~~t 61 (294)
T 1oju_A 1 MKLGFVGA-GRVGSTSAFTCLLNLD-VDEIALVDIAEDLAVGE-AM--DL---------AHAAAG-----IDKYPKIVGG 61 (294)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHHSC-CSEEEEECSSHHHHHHH-HH--HH---------HHHHHT-----TTCCCEEEEE
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCC-CCeEEEEECChHHHHHH-HH--HH---------Hhhhhh-----cCCCCEEEEe
Confidence 57999998 9999999999988763 34788888764221110 00 01 000000 0011122211
Q ss_pred cCCCCCCCCChhhhHHHHhcCccEEEEcCccCC-ccccHHHHHHHhHHHHHHHHHHHHhccCCceEE
Q 010075 93 DISSEDLGLKDSNLKEELWNELDIMVNSAAITK-FDERYDVAFGINTLGVIHLVNFAKKCVKLKVFV 158 (519)
Q Consensus 93 Dl~~~~lgls~~~~~~~l~~~vdiViH~Aa~v~-f~~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V 158 (519)
+ + .+.+++.|+||-+|+..+ ......+.+..|+.-.+.+.+.+.+. +...++
T Consensus 62 --~-------d----~~a~~~aDiVViaag~~~kpG~~R~dl~~~N~~i~~~i~~~i~~~-~p~a~i 114 (294)
T 1oju_A 62 --A-------D----YSLLKGSEIIVVTAGLARKPGMTRLDLAHKNAGIIKDIAKKIVEN-APESKI 114 (294)
T ss_dssp --S-------C----GGGGTTCSEEEECCCCCCCSSCCHHHHHHHHHHHHHHHHHHHHTT-STTCEE
T ss_pred --C-------C----HHHhCCCCEEEECCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHhh-CCCeEE
Confidence 0 1 134578999999998764 23456677899999999999988876 334443
|
| >3gvi_A Malate dehydrogenase; NAD, oxidoreductase, tricarboxylic acid cycle, structural genomics; HET: ADP; 2.25A {Brucella melitensis biovar ABORTUS2308} PDB: 3gvh_A* | Back alignment and structure |
|---|
Probab=92.74 E-value=1.2 Score=44.10 Aligned_cols=109 Identities=17% Similarity=0.168 Sum_probs=65.3
Q ss_pred cCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 010075 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (519)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (519)
++.++|.|+|| |.+|..++..|+..+. .+|.++.+........ ..++.+...|. + ...++..
T Consensus 5 m~~~kI~viGa-G~vG~~~a~~l~~~~~--~~v~L~Di~~~~~~g~---~~dl~~~~~~~------~------~~~~v~~ 66 (324)
T 3gvi_A 5 MARNKIALIGS-GMIGGTLAHLAGLKEL--GDVVLFDIAEGTPQGK---GLDIAESSPVD------G------FDAKFTG 66 (324)
T ss_dssp -CCCEEEEECC-SHHHHHHHHHHHHTTC--CEEEEECSSSSHHHHH---HHHHHHHHHHH------T------CCCCEEE
T ss_pred CcCCEEEEECC-CHHHHHHHHHHHhCCC--CeEEEEeCCchhHHHH---HHHHhchhhhc------C------CCCEEEE
Confidence 56789999998 9999999999988764 2788888866432111 11111110000 0 0112211
Q ss_pred EeccCCCCCCCCChhhhHHHHhcCccEEEEcCccCC-ccccHHHHHHHhHHHHHHHHHHHHhc
Q 010075 90 VPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITK-FDERYDVAFGINTLGVIHLVNFAKKC 151 (519)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~~~vdiViH~Aa~v~-f~~~~~~~~~~Nv~gt~~ll~~a~~~ 151 (519)
..| . +.+++.|+||.+|+..+ ......+.+..|+.-.+.+.+.+.+.
T Consensus 67 -t~d------------~--~a~~~aDiVIiaag~p~k~G~~R~dl~~~N~~i~~~i~~~i~~~ 114 (324)
T 3gvi_A 67 -AND------------Y--AAIEGADVVIVTAGVPRKPGMSRDDLLGINLKVMEQVGAGIKKY 114 (324)
T ss_dssp -ESS------------G--GGGTTCSEEEECCSCCCC-----CHHHHHHHHHHHHHHHHHHHH
T ss_pred -eCC------------H--HHHCCCCEEEEccCcCCCCCCCHHHHHHhhHHHHHHHHHHHHHH
Confidence 112 1 34578999999998653 22334456788999999999888776
|
| >3pzr_A Aspartate-semialdehyde dehydrogenase; NADP, oxidoreductase-oxidoreductase inhibitor complex; HET: NAP; 1.75A {Vibrio cholerae} PDB: 1mc4_A 1mb4_A* 3q0e_A | Back alignment and structure |
|---|
Probab=92.63 E-value=0.21 Score=50.54 Aligned_cols=34 Identities=15% Similarity=0.317 Sum_probs=25.5
Q ss_pred CEEEEeCCccHHHHHHHHHHHHhCCC-ccEEEEEE
Q 010075 13 KTILVSGVTGFVAKVFIEKILRVQPN-VKKLYLFV 46 (519)
Q Consensus 13 k~VlITGaTGFlG~~Lv~~LL~~g~~-v~~V~~Lv 46 (519)
++|.|.||||++|..|+++||...|. ..++..+.
T Consensus 1 ~~VaIvGATG~vG~ellr~lL~~hp~~~~~l~~~s 35 (370)
T 3pzr_A 1 MRVGLVGWRGMVGSVLMQRMVEERDFDLIEPVFFS 35 (370)
T ss_dssp CEEEEESCSSHHHHHHHHHHHHTTGGGGSEEEEEE
T ss_pred CEEEEECCCCHHHHHHHHHHHhcCCCCceEEEEEe
Confidence 47999999999999999966665552 24665554
|
| >1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A | Back alignment and structure |
|---|
Probab=92.63 E-value=0.27 Score=49.54 Aligned_cols=36 Identities=11% Similarity=0.206 Sum_probs=31.0
Q ss_pred cCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecC
Q 010075 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAA 49 (519)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~ 49 (519)
.++++|+|+|+ |-+|+.++..+...| .+|++..|+.
T Consensus 165 l~~~~VlViGa-GgvG~~aa~~a~~~G---a~V~v~dr~~ 200 (361)
T 1pjc_A 165 VKPGKVVILGG-GVVGTEAAKMAVGLG---AQVQIFDINV 200 (361)
T ss_dssp BCCCEEEEECC-SHHHHHHHHHHHHTT---CEEEEEESCH
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHhCC---CEEEEEeCCH
Confidence 45689999998 999999999999887 4788888864
|
| >2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus} | Back alignment and structure |
|---|
Probab=92.62 E-value=0.12 Score=50.57 Aligned_cols=37 Identities=27% Similarity=0.336 Sum_probs=31.4
Q ss_pred cCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecC
Q 010075 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAA 49 (519)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~ 49 (519)
+++++|+|+|+ |.+|+.++..|++.|. .+|++..|+.
T Consensus 139 l~~~~vlVlGa-Gg~g~aia~~L~~~G~--~~V~v~nR~~ 175 (297)
T 2egg_A 139 LDGKRILVIGA-GGGARGIYFSLLSTAA--ERIDMANRTV 175 (297)
T ss_dssp CTTCEEEEECC-SHHHHHHHHHHHTTTC--SEEEEECSSH
T ss_pred CCCCEEEEECc-HHHHHHHHHHHHHCCC--CEEEEEeCCH
Confidence 46899999997 7899999999999873 5888888874
|
| >2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens} | Back alignment and structure |
|---|
Probab=92.56 E-value=0.27 Score=49.63 Aligned_cols=35 Identities=17% Similarity=0.213 Sum_probs=29.0
Q ss_pred cCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEe
Q 010075 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVR 47 (519)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR 47 (519)
-.|.+|+|+||+|.+|...+..+...| .+|++..+
T Consensus 182 ~~g~~VlV~Ga~G~vG~~~~qla~~~G---a~Vi~~~~ 216 (375)
T 2vn8_A 182 CTGKRVLILGASGGVGTFAIQVMKAWD---AHVTAVCS 216 (375)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTT---CEEEEEEC
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHhCC---CEEEEEeC
Confidence 357899999999999999888777766 47887764
|
| >3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus} | Back alignment and structure |
|---|
Probab=92.53 E-value=0.15 Score=50.89 Aligned_cols=36 Identities=17% Similarity=0.116 Sum_probs=30.9
Q ss_pred CCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecC
Q 010075 11 ENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAA 49 (519)
Q Consensus 11 ~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~ 49 (519)
.|.+|+|+||+|.+|...+..+...| .+|++..++.
T Consensus 150 ~g~~VlV~gg~G~vG~~a~qla~~~G---a~Vi~~~~~~ 185 (346)
T 3fbg_A 150 EGKTLLIINGAGGVGSIATQIAKAYG---LRVITTASRN 185 (346)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTT---CEEEEECCSH
T ss_pred CCCEEEEEcCCCHHHHHHHHHHHHcC---CEEEEEeCCH
Confidence 68999999999999999998887777 5889888753
|
| >1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A | Back alignment and structure |
|---|
Probab=92.44 E-value=0.26 Score=49.49 Aligned_cols=38 Identities=13% Similarity=0.158 Sum_probs=31.5
Q ss_pred CCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcc
Q 010075 11 ENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADID 52 (519)
Q Consensus 11 ~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~ 52 (519)
.|.+|||+|| |.+|...+..+...| .+|++..|+....
T Consensus 179 ~g~~VlV~Ga-G~vG~~~~qlak~~G---a~Vi~~~~~~~~~ 216 (360)
T 1piw_A 179 PGKKVGIVGL-GGIGSMGTLISKAMG---AETYVISRSSRKR 216 (360)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHHT---CEEEEEESSSTTH
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHCC---CEEEEEcCCHHHH
Confidence 5889999999 999999988777777 4789999876543
|
| >7mdh_A Protein (malate dehydrogenase); chloroplastic malate dehydrogenase (NADP+), activated by LIG chloroplastic malate dehydrogenase; 2.40A {Sorghum bicolor} SCOP: c.2.1.5 d.162.1.1 PDB: 1civ_A* | Back alignment and structure |
|---|
Probab=92.31 E-value=0.66 Score=46.85 Aligned_cols=111 Identities=12% Similarity=0.113 Sum_probs=65.0
Q ss_pred CCCEEEEeCCccHHHHHHHHHHHHhCCCccE---EEE--EEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCC
Q 010075 11 ENKTILVSGVTGFVAKVFIEKILRVQPNVKK---LYL--FVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISE 85 (519)
Q Consensus 11 ~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~---V~~--LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~ 85 (519)
+..+|.|+||+|.+|..++-.|+..+ -+.+ |.+ +...+. .+.++.+.++- ......+ ..
T Consensus 31 ~~~KV~ViGAaG~VG~~la~~l~~~~-l~~e~~~l~L~d~d~~~~----~~~~~G~amDL----------~h~~~p~-~~ 94 (375)
T 7mdh_A 31 KLVNIAVSGAAGMISNHLLFKLASGE-VFGQDQPIALKLLGSERS----FQALEGVAMEL----------EDSLYPL-LR 94 (375)
T ss_dssp CCEEEEEETTTSHHHHHHHHHHHHTT-TTCTTCCEEEEEECCGGG----HHHHHHHHHHH----------HTTTCTT-EE
T ss_pred CCCEEEEECCCChHHHHHHHHHHcCC-cCCCCceeEEEecCccch----hhhhHHHHHhH----------Hhhhhhh-cC
Confidence 34689999999999999999988753 2222 443 223221 11111111110 0000000 11
Q ss_pred ceEEEeccCCCCCCCCChhhhHHHHhcCccEEEEcCccCC-ccccHHHHHHHhHHHHHHHHHHHHhc
Q 010075 86 KITFVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITK-FDERYDVAFGINTLGVIHLVNFAKKC 151 (519)
Q Consensus 86 ~v~~v~gDl~~~~lgls~~~~~~~l~~~vdiViH~Aa~v~-f~~~~~~~~~~Nv~gt~~ll~~a~~~ 151 (519)
.+.. . ..+. ..+.+.|+||-+||..+ -.+...+.++.|+.-.+.+.+...+.
T Consensus 95 ~v~i-----~-------~~~y--~~~~daDvVVitag~prkpG~tR~DLl~~N~~I~k~i~~~i~~~ 147 (375)
T 7mdh_A 95 EVSI-----G-------IDPY--EVFEDVDWALLIGAKPRGPGMERAALLDINGQIFADQGKALNAV 147 (375)
T ss_dssp EEEE-----E-------SCHH--HHTTTCSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CcEE-----e-------cCCH--HHhCCCCEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHh
Confidence 2222 1 1121 45678999999998754 34667788999999999998888764
|
| >4dpl_A Malonyl-COA/succinyl-COA reductase; dinucleotide binding, dimerization domain, NADP, oxidoreductase; HET: NAP; 1.90A {Sulfolobus tokodaii} PDB: 4dpk_A* 4dpm_A* | Back alignment and structure |
|---|
Probab=92.27 E-value=0.15 Score=51.39 Aligned_cols=39 Identities=15% Similarity=0.276 Sum_probs=28.3
Q ss_pred CCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEE-ecCCcc
Q 010075 12 NKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFV-RAADID 52 (519)
Q Consensus 12 ~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~Lv-R~~~~~ 52 (519)
..+|.|.||||++|..|++.|.+ .|.+ ++..+. |+..++
T Consensus 7 ~~kVaIvGATGyvG~eLlrlL~~-hP~~-el~~l~S~~saGk 46 (359)
T 4dpl_A 7 TLKAAILGATGLVGIEYVRMLSN-HPYI-KPAYLAGKGSVGK 46 (359)
T ss_dssp CEEEEETTTTSTTHHHHHHHHTT-CSSE-EEEEEEESTTTTS
T ss_pred CCeEEEECCCCHHHHHHHHHHHh-CCCc-eEEEEECchhcCC
Confidence 46899999999999999996655 5775 555554 333344
|
| >4dpk_A Malonyl-COA/succinyl-COA reductase; dinucleotide binding, dimerization domain, NADP, oxidoreductase; 2.05A {Sulfolobus tokodaii} PDB: 4dpm_A* | Back alignment and structure |
|---|
Probab=92.27 E-value=0.15 Score=51.39 Aligned_cols=39 Identities=15% Similarity=0.276 Sum_probs=28.4
Q ss_pred CCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEE-ecCCcc
Q 010075 12 NKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFV-RAADID 52 (519)
Q Consensus 12 ~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~Lv-R~~~~~ 52 (519)
..+|.|.||||++|..|++.|.+ .|.+ ++..+. |+..++
T Consensus 7 ~~kVaIvGATGyvG~eLlrlL~~-hP~~-el~~l~S~~saGk 46 (359)
T 4dpk_A 7 TLKAAILGATGLVGIEYVRMLSN-HPYI-KPAYLAGKGSVGK 46 (359)
T ss_dssp CEEEEETTTTSTTHHHHHHHHTT-CSSE-EEEEEEESTTTTS
T ss_pred CCeEEEECCCCHHHHHHHHHHHh-CCCc-eEEEEECchhcCC
Confidence 46899999999999999996655 5775 555554 333344
|
| >3h5n_A MCCB protein; ubiquitin-activating enzyme, microcin, protein structure, MCCC7, peptide antibiotics, N-P bond formation, transferase; HET: ATP; 1.90A {Escherichia coli} PDB: 3h5r_A 3h9g_A 3h9j_A* 3h9q_A 3h5a_A | Back alignment and structure |
|---|
Probab=92.03 E-value=0.39 Score=48.20 Aligned_cols=98 Identities=16% Similarity=0.155 Sum_probs=59.9
Q ss_pred hhhcCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHH----HHHhh---hhhHHHHHhhhcccc
Q 010075 7 VEFLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQ----NEVLA---KDVFNVLKEKWGTRL 79 (519)
Q Consensus 7 ~~~~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~----~~~~~---~~~f~~l~~~~~~~~ 79 (519)
++-+++++|+|.|+ |.+|..+++.|.+.| |.+|.++.+..-..+-..|-. +++-. ...-+++++..|
T Consensus 113 q~~L~~~~VlvvG~-GglGs~va~~La~aG--vg~i~lvD~D~Ve~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np--- 186 (353)
T 3h5n_A 113 QDKLKNAKVVILGC-GGIGNHVSVILATSG--IGEIILIDNDQIENTNLTRQVLFSEDDVGKNKTEVIKRELLKRNS--- 186 (353)
T ss_dssp HHHHHTCEEEEECC-SHHHHHHHHHHHHHT--CSEEEEEECCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHCT---
T ss_pred HHHHhCCeEEEECC-CHHHHHHHHHHHhCC--CCeEEEECCCcCcccccccccCCChHHCCChHHHHHHHHHHHHCC---
Confidence 56678899999996 779999999999987 588998887542221111100 00000 001123334333
Q ss_pred ccccCCceEEEeccCCCCCCCCChhhhHHHHhcCccEEEEcCc
Q 010075 80 NSFISEKITFVPGDISSEDLGLKDSNLKEELWNELDIMVNSAA 122 (519)
Q Consensus 80 ~~~~~~~v~~v~gDl~~~~lgls~~~~~~~l~~~vdiViH~Aa 122 (519)
.-+++.+..+++.. .+. .. ++++|+||.+..
T Consensus 187 ----~v~v~~~~~~i~~~------~~~-~~-~~~~DlVvd~~D 217 (353)
T 3h5n_A 187 ----EISVSEIALNINDY------TDL-HK-VPEADIWVVSAD 217 (353)
T ss_dssp ----TSEEEEEECCCCSG------GGG-GG-SCCCSEEEECCC
T ss_pred ----CCeEEEeecccCch------hhh-hH-hccCCEEEEecC
Confidence 24677888888742 223 24 678999999763
|
| >2zqz_A L-LDH, L-lactate dehydrogenase; oxidoreductase, rossmann fold, cytoplasm, glycolysis, NAD, phosphoprotein; 2.50A {Lactobacillus casei} PDB: 2zqy_A 3vkv_A* 1llc_A* | Back alignment and structure |
|---|
Probab=92.00 E-value=2.7 Score=41.55 Aligned_cols=106 Identities=10% Similarity=0.041 Sum_probs=64.7
Q ss_pred CCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEEe
Q 010075 12 NKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVP 91 (519)
Q Consensus 12 ~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v~ 91 (519)
.++|.|+|| |.+|..++-.|+..+ -+.+|.++.+.... .+....++.+. . .+ ...+.+..
T Consensus 9 ~~KI~IiGa-G~vG~~la~~l~~~~-~~~el~L~Di~~~~---~~g~~~dl~~~---------~-----~~-~~~~~i~~ 68 (326)
T 2zqz_A 9 HQKVILVGD-GAVGSSYAYAMVLQG-IAQEIGIVDIFKDK---TKGDAIDLSNA---------L-----PF-TSPKKIYS 68 (326)
T ss_dssp CCEEEEECC-SHHHHHHHHHHHHHT-CCSEEEEECSCHHH---HHHHHHHHHTT---------G-----GG-SCCCEEEE
T ss_pred CCEEEEECC-CHHHHHHHHHHHcCC-CCCEEEEEeCCchH---hHHHHHHHHHH---------H-----Hh-cCCeEEEE
Confidence 368999998 999999999988765 35678888774211 11111111110 0 01 12333332
Q ss_pred ccCCCCCCCCChhhhHHHHhcCccEEEEcCccCCc-cccHHHHHHHhHHHHHHHHHHHHhc
Q 010075 92 GDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF-DERYDVAFGINTLGVIHLVNFAKKC 151 (519)
Q Consensus 92 gDl~~~~lgls~~~~~~~l~~~vdiViH~Aa~v~f-~~~~~~~~~~Nv~gt~~ll~~a~~~ 151 (519)
+| . ..+.+.|+||.+|+...- .......+..|+...+.+.+.+.+.
T Consensus 69 ~~---------~-----~a~~~aDvVii~ag~~~k~g~~R~dl~~~n~~i~~~i~~~i~~~ 115 (326)
T 2zqz_A 69 AE---------Y-----SDAKDADLVVITAGAPQKPGETRLDLVNKNLKILKSIVDPIVDS 115 (326)
T ss_dssp CC---------G-----GGGGGCSEEEECCCCC-----CHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CC---------H-----HHhCCCCEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 11 1 235689999999987532 2344566788999999998888776
|
| >1y8q_A Ubiquitin-like 1 activating enzyme E1A; SUMO, heterodimer, UBL, ligase; HET: ATP; 2.25A {Homo sapiens} PDB: 1y8r_A* 3kyc_A* 3kyd_A* | Back alignment and structure |
|---|
Probab=91.94 E-value=1.9 Score=43.08 Aligned_cols=117 Identities=13% Similarity=0.105 Sum_probs=70.9
Q ss_pred hhcCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCC----------------cccHHHHHHHHHhhhhhHHHH
Q 010075 8 EFLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAAD----------------IDSAALRFQNEVLAKDVFNVL 71 (519)
Q Consensus 8 ~~~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~----------------~~~~~~rl~~~~~~~~~f~~l 71 (519)
+-+++.+|+|.|+ |.+|..+++.|.+.| |++|.++....- +....+-+ -+++
T Consensus 32 ~~L~~~~VlivG~-GGlG~~ia~~La~~G--vg~itlvD~d~V~~sNL~rq~~~~~~diG~~Ka~~~---------~~~l 99 (346)
T 1y8q_A 32 KRLRASRVLLVGL-KGLGAEIAKNLILAG--VKGLTMLDHEQVTPEDPGAQFLIRTGSVGRNRAEAS---------LERA 99 (346)
T ss_dssp HHHHTCEEEEECC-SHHHHHHHHHHHHHT--CSEEEEECCCBCCSSCGGGCTTSCSSCTTSBHHHHH---------HHHH
T ss_pred HHHhCCeEEEECC-CHHHHHHHHHHHHcC--CCEEEEEECCCcchhhCCCCCccccccCcCCHHHHH---------HHHH
Confidence 3456789999995 679999999999987 578888743210 11111111 1233
Q ss_pred HhhhccccccccCCceEEEeccCCCCCCCCChhhhHHHHhcCccEEEEcCccCCccccHHHHHHHhHHHHHHHHHHHHhc
Q 010075 72 KEKWGTRLNSFISEKITFVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKFDERYDVAFGINTLGVIHLVNFAKKC 151 (519)
Q Consensus 72 ~~~~~~~~~~~~~~~v~~v~gDl~~~~lgls~~~~~~~l~~~vdiViH~Aa~v~f~~~~~~~~~~Nv~gt~~ll~~a~~~ 151 (519)
++..| .-+++.+..++.+ . . ..+++++|+||.+... .+ .-..+-++|.+.
T Consensus 100 ~~lnp-------~v~v~~~~~~~~~-------~-~-~~~~~~~dvVv~~~d~------~~--------~r~~ln~~~~~~ 149 (346)
T 1y8q_A 100 QNLNP-------MVDVKVDTEDIEK-------K-P-ESFFTQFDAVCLTCCS------RD--------VIVKVDQICHKN 149 (346)
T ss_dssp HHTCT-------TSEEEEECSCGGG-------C-C-HHHHTTCSEEEEESCC------HH--------HHHHHHHHHHHT
T ss_pred HhHCC-------CeEEEEEecccCc-------c-h-HHHhcCCCEEEEcCCC------HH--------HHHHHHHHHHHc
Confidence 44333 2456777777652 1 1 2566889999987432 22 223355567764
Q ss_pred cCCceEEEEecceeecC
Q 010075 152 VKLKVFVHVSTAYVAGE 168 (519)
Q Consensus 152 ~~l~~~V~vSTa~v~~~ 168 (519)
+ ..||+.++...+|.
T Consensus 150 -~-ip~i~~~~~G~~G~ 164 (346)
T 1y8q_A 150 -S-IKFFTGDVFGYHGY 164 (346)
T ss_dssp -T-CEEEEEEEEBTEEE
T ss_pred -C-CCEEEEeecccEEE
Confidence 3 56888877666654
|
| >3d0o_A L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, glycolysis, NAD, oxidoreductase, phosphoprotein; 1.80A {Staphylococcus aureus} PDB: 3d4p_A* 3h3j_A* | Back alignment and structure |
|---|
Probab=91.92 E-value=2.5 Score=41.59 Aligned_cols=118 Identities=13% Similarity=0.129 Sum_probs=71.5
Q ss_pred CCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEE
Q 010075 11 ENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFV 90 (519)
Q Consensus 11 ~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v 90 (519)
+.++|.|+|| |.+|..++..|+..+. +.+|.++.+.. ++++....+ +-+. . ++....+.+.
T Consensus 5 ~~~KI~IIGa-G~vG~~la~~l~~~~~-~~ei~L~Di~~------~~~~g~~~d--l~~~----~-----~~~~~~~~v~ 65 (317)
T 3d0o_A 5 KGNKVVLIGN-GAVGSSYAFSLVNQSI-VDELVIIDLDT------EKVRGDVMD--LKHA----T-----PYSPTTVRVK 65 (317)
T ss_dssp CCCEEEEECC-SHHHHHHHHHHHHHCS-CSEEEEECSCH------HHHHHHHHH--HHHH----G-----GGSSSCCEEE
T ss_pred CCCEEEEECC-CHHHHHHHHHHHhCCC-CCEEEEEeCCh------hHhhhhhhh--HHhh----h-----hhcCCCeEEE
Confidence 4579999998 9999999999988753 45777776642 122111110 0000 0 0111223333
Q ss_pred eccCCCCCCCCChhhhHHHHhcCccEEEEcCccCCc-cccHHHHHHHhHHHHHHHHHHHHhccCCceEEEEec
Q 010075 91 PGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF-DERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVST 162 (519)
Q Consensus 91 ~gDl~~~~lgls~~~~~~~l~~~vdiViH~Aa~v~f-~~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V~vST 162 (519)
. | +. ..+.+.|+||-+|+...- .......+..|+.-.+.+.+.+.+. ....++.+.|
T Consensus 66 ~-~---------~~----~a~~~aDvVvi~ag~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~-~p~a~viv~t 123 (317)
T 3d0o_A 66 A-G---------EY----SDCHDADLVVICAGAAQKPGETRLDLVSKNLKIFKSIVGEVMAS-KFDGIFLVAT 123 (317)
T ss_dssp E-C---------CG----GGGTTCSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHT-TCCSEEEECS
T ss_pred e-C---------CH----HHhCCCCEEEECCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHh-CCCcEEEEec
Confidence 2 2 11 335789999999987542 3445566888999999998888776 4455555544
|
| >3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium} | Back alignment and structure |
|---|
Probab=91.90 E-value=0.082 Score=45.58 Aligned_cols=35 Identities=23% Similarity=0.199 Sum_probs=29.0
Q ss_pred CCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecC
Q 010075 11 ENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAA 49 (519)
Q Consensus 11 ~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~ 49 (519)
.+++|+|.|+ |.+|+.++..|.+.| .+|++..|+.
T Consensus 20 ~~~~v~iiG~-G~iG~~~a~~l~~~g---~~v~v~~r~~ 54 (144)
T 3oj0_A 20 GGNKILLVGN-GMLASEIAPYFSYPQ---YKVTVAGRNI 54 (144)
T ss_dssp CCCEEEEECC-SHHHHHHGGGCCTTT---CEEEEEESCH
T ss_pred cCCEEEEECC-CHHHHHHHHHHHhCC---CEEEEEcCCH
Confidence 4899999995 999999999998866 3488888864
|
| >3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A* | Back alignment and structure |
|---|
Probab=91.87 E-value=0.55 Score=48.19 Aligned_cols=73 Identities=14% Similarity=0.234 Sum_probs=50.4
Q ss_pred CCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEEe
Q 010075 12 NKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVP 91 (519)
Q Consensus 12 ~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v~ 91 (519)
+++|+|.|+ |-+|+.+++.|.+.| ..|.++.+.... .+++. ...+.++.
T Consensus 4 ~~~viIiG~-Gr~G~~va~~L~~~g---~~vvvId~d~~~---v~~~~------------------------~~g~~vi~ 52 (413)
T 3l9w_A 4 GMRVIIAGF-GRFGQITGRLLLSSG---VKMVVLDHDPDH---IETLR------------------------KFGMKVFY 52 (413)
T ss_dssp CCSEEEECC-SHHHHHHHHHHHHTT---CCEEEEECCHHH---HHHHH------------------------HTTCCCEE
T ss_pred CCeEEEECC-CHHHHHHHHHHHHCC---CCEEEEECCHHH---HHHHH------------------------hCCCeEEE
Confidence 467999995 999999999999988 456777765321 11111 13567899
Q ss_pred ccCCCCCCCCChhhhHHHH-hcCccEEEEcCc
Q 010075 92 GDISSEDLGLKDSNLKEEL-WNELDIMVNSAA 122 (519)
Q Consensus 92 gDl~~~~lgls~~~~~~~l-~~~vdiViH~Aa 122 (519)
||.++ .+.++.+ +++.|+||-+..
T Consensus 53 GDat~-------~~~L~~agi~~A~~viv~~~ 77 (413)
T 3l9w_A 53 GDATR-------MDLLESAGAAKAEVLINAID 77 (413)
T ss_dssp SCTTC-------HHHHHHTTTTTCSEEEECCS
T ss_pred cCCCC-------HHHHHhcCCCccCEEEECCC
Confidence 99994 4444343 568999987654
|
| >3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A | Back alignment and structure |
|---|
Probab=91.83 E-value=0.27 Score=51.07 Aligned_cols=36 Identities=14% Similarity=0.121 Sum_probs=30.2
Q ss_pred cCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEec
Q 010075 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRA 48 (519)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~ 48 (519)
-.|.+|+|+||+|-+|...+..+...| .+|++++++
T Consensus 227 ~~g~~VlV~GasG~vG~~avqlak~~G---a~vi~~~~~ 262 (456)
T 3krt_A 227 KQGDNVLIWGASGGLGSYATQFALAGG---ANPICVVSS 262 (456)
T ss_dssp CTTCEEEETTTTSHHHHHHHHHHHHTT---CEEEEEESS
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHcC---CeEEEEECC
Confidence 467899999999999999988887777 577888764
|
| >3dr3_A N-acetyl-gamma-glutamyl-phosphate reductase; csgid target, ARGC, essential gene, amino-acid biosynthesis, arginine biosynthesis, cytoplasm; HET: MLT; 2.00A {Shigella flexneri} PDB: 2g17_A | Back alignment and structure |
|---|
Probab=91.75 E-value=0.47 Score=47.26 Aligned_cols=35 Identities=17% Similarity=0.433 Sum_probs=27.8
Q ss_pred CEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecC
Q 010075 13 KTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAA 49 (519)
Q Consensus 13 k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~ 49 (519)
++|+|.||||++|..|++.|.+ .|++ ++..+.++.
T Consensus 5 ~kv~IvGatG~vG~~l~~~L~~-~p~~-el~~l~s~~ 39 (337)
T 3dr3_A 5 LNTLIVGASGYAGAELVTYVNR-HPHM-NITALTVSA 39 (337)
T ss_dssp EEEEEETTTSHHHHHHHHHHHH-CTTE-EEEEEEEET
T ss_pred eEEEEECCCChHHHHHHHHHHh-CCCC-cEEEEEecC
Confidence 5899999999999999998876 4775 566665443
|
| >4aj2_A L-lactate dehydrogenase A chain; oxidoreductase-inhibitor complex, fragment-based LEAD genera inhibitors; HET: 52C; 1.75A {Rattus norvegicus} PDB: 4aj1_A* 4aje_A* 4ajh_A* 4aji_A* 4ajj_A* 4ajk_A* 4ajl_A* 4ajn_A* 4ajo_A* 4al4_A* 4aj4_A* 4ajp_A* 1i10_A* 3h3f_A* 9ldt_A* 9ldb_A* 1t2f_A* 1i0z_A* 5ldh_A* 1ldm_A* ... | Back alignment and structure |
|---|
Probab=91.64 E-value=2.1 Score=42.43 Aligned_cols=115 Identities=16% Similarity=0.059 Sum_probs=69.9
Q ss_pred hcCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceE
Q 010075 9 FLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKIT 88 (519)
Q Consensus 9 ~~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~ 88 (519)
....++|.|+|| |.+|..++..|+..+ -+.+|.++.+.... .+....++.+...| .....
T Consensus 16 ~~~~~kV~ViGa-G~vG~~~a~~l~~~~-~~~el~L~Di~~~~---~~g~a~DL~~~~~~---------------~~~~~ 75 (331)
T 4aj2_A 16 QVPQNKITVVGV-GAVGMACAISILMKD-LADELALVDVIEDK---LKGEMMDLQHGSLF---------------LKTPK 75 (331)
T ss_dssp -CCSSEEEEECC-SHHHHHHHHHHHHTT-CCSEEEEECSCHHH---HHHHHHHHHHTGGG---------------CSCCE
T ss_pred cCCCCEEEEECC-CHHHHHHHHHHHhCC-CCceEEEEeCChHH---HHHHHHhhhhhhhc---------------cCCCe
Confidence 456789999997 999999999999875 33578887765211 11111111111000 01111
Q ss_pred EE-eccCCCCCCCCChhhhHHHHhcCccEEEEcCccCCc-cccHHHHHHHhHHHHHHHHHHHHhccCCceEE
Q 010075 89 FV-PGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF-DERYDVAFGINTLGVIHLVNFAKKCVKLKVFV 158 (519)
Q Consensus 89 ~v-~gDl~~~~lgls~~~~~~~l~~~vdiViH~Aa~v~f-~~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V 158 (519)
.+ .+| . ..+.+.|+||-+||..+- .+.-.+.++.|+.-.+.+.+.+.+. ....++
T Consensus 76 i~~~~d------------~--~~~~~aDiVvi~aG~~~kpG~tR~dL~~~N~~I~~~i~~~i~~~-~p~a~v 132 (331)
T 4aj2_A 76 IVSSKD------------Y--SVTANSKLVIITAGARQQEGESRLNLVQRNVNIFKFIIPNVVKY-SPQCKL 132 (331)
T ss_dssp EEECSS------------G--GGGTTEEEEEECCSCCCCTTCCGGGGHHHHHHHHHHHHHHHHHH-CTTCEE
T ss_pred EEEcCC------------H--HHhCCCCEEEEccCCCCCCCccHHHHHHHHHHHHHHHHHHHHHH-CCCeEE
Confidence 22 222 1 235789999999997542 3445567899999999999888775 334333
|
| >1nvt_A Shikimate 5'-dehydrogenase; structural genomics, PSI, protein structure initiative; HET: NAP; 2.35A {Methanocaldococcus jannaschii} SCOP: c.2.1.7 c.58.1.5 | Back alignment and structure |
|---|
Probab=91.63 E-value=0.14 Score=49.85 Aligned_cols=35 Identities=14% Similarity=0.258 Sum_probs=29.6
Q ss_pred cCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecC
Q 010075 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAA 49 (519)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~ 49 (519)
+++++++||||+ .+|+.++..|++.| +|++..|+.
T Consensus 126 l~~k~vlV~GaG-giG~aia~~L~~~G----~V~v~~r~~ 160 (287)
T 1nvt_A 126 VKDKNIVIYGAG-GAARAVAFELAKDN----NIIIANRTV 160 (287)
T ss_dssp CCSCEEEEECCS-HHHHHHHHHHTSSS----EEEEECSSH
T ss_pred cCCCEEEEECch-HHHHHHHHHHHHCC----CEEEEECCH
Confidence 578999999985 89999999999876 677777753
|
| >1ur5_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle; HET: NAD; 1.75A {Chloroflexus aurantiacus} SCOP: c.2.1.5 d.162.1.1 PDB: 1uxg_A* 1guy_A* 1uxk_A* 1uxh_A* 1uxj_A* 1uxi_A* | Back alignment and structure |
|---|
Probab=91.58 E-value=1.7 Score=42.50 Aligned_cols=116 Identities=11% Similarity=0.064 Sum_probs=65.6
Q ss_pred CEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEEec
Q 010075 13 KTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVPG 92 (519)
Q Consensus 13 k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v~g 92 (519)
++|.|+|| |.+|..++..|+..+. + .|.++.+..... +....++.+.. . ... ...++... .
T Consensus 3 ~kI~VIGa-G~vG~~~a~~la~~g~-~-~v~L~Di~~~~~---~g~~~dl~~~~-----~-~~~------~~~~i~~t-~ 63 (309)
T 1ur5_A 3 KKISIIGA-GFVGSTTAHWLAAKEL-G-DIVLLDIVEGVP---QGKALDLYEAS-----P-IEG------FDVRVTGT-N 63 (309)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTC-S-EEEEECSSSSHH---HHHHHHHHTTH-----H-HHT------CCCCEEEE-S
T ss_pred CEEEEECC-CHHHHHHHHHHHHCCC-C-eEEEEeCCccHH---HHHHHhHHHhH-----h-hcC------CCeEEEEC-C
Confidence 58999998 9999999999988763 2 577776654322 11111111100 0 000 01122211 2
Q ss_pred cCCCCCCCCChhhhHHHHhcCccEEEEcCccCCc-cccHHHHHHHhHHHHHHHHHHHHhccCCceEEEEec
Q 010075 93 DISSEDLGLKDSNLKEELWNELDIMVNSAAITKF-DERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVST 162 (519)
Q Consensus 93 Dl~~~~lgls~~~~~~~l~~~vdiViH~Aa~v~f-~~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V~vST 162 (519)
| . ..+++.|+||.+|+...- ..........|+...+.+.+.+.+. ....++.+.|
T Consensus 64 d------------~--~a~~~aD~Vi~a~g~p~~~g~~r~dl~~~n~~i~~~i~~~i~~~-~p~a~vi~~t 119 (309)
T 1ur5_A 64 N------------Y--ADTANSDVIVVTSGAPRKPGMSREDLIKVNADITRACISQAAPL-SPNAVIIMVN 119 (309)
T ss_dssp C------------G--GGGTTCSEEEECCCC--------CHHHHHHHHHHHHHHHHHGGG-CTTCEEEECC
T ss_pred C------------H--HHHCCCCEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhh-CCCeEEEEcC
Confidence 2 1 235689999999987532 1222344678888888999888876 4556665554
|
| >1ez4_A Lactate dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.30A {Lactobacillus pentosus} SCOP: c.2.1.5 d.162.1.1 | Back alignment and structure |
|---|
Probab=91.58 E-value=2.3 Score=41.92 Aligned_cols=112 Identities=11% Similarity=0.061 Sum_probs=64.8
Q ss_pred CCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEEe
Q 010075 12 NKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVP 91 (519)
Q Consensus 12 ~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v~ 91 (519)
.++|.|+|| |.+|..++-.|+..+ -+.+|.++.+.... .+....++.+. . .+ ...+.+..
T Consensus 5 ~~KI~IiGa-G~vG~~~a~~l~~~~-~~~el~L~Di~~~~---~~g~~~dl~~~---------~-----~~-~~~~~v~~ 64 (318)
T 1ez4_A 5 HQKVVLVGD-GAVGSSYAFAMAQQG-IAEEFVIVDVVKDR---TKGDALDLEDA---------Q-----AF-TAPKKIYS 64 (318)
T ss_dssp BCEEEEECC-SHHHHHHHHHHHHHT-CCSEEEEECSSHHH---HHHHHHHHHGG---------G-----GG-SCCCEEEE
T ss_pred CCEEEEECC-CHHHHHHHHHHHcCC-CCCEEEEEeCCchH---HHHHHHHHHHH---------H-----Hh-cCCeEEEE
Confidence 368999998 999999999998875 34688888774211 11111111110 0 01 12333332
Q ss_pred ccCCCCCCCCChhhhHHHHhcCccEEEEcCccCCc-cccHHHHHHHhHHHHHHHHHHHHhccCCceEE
Q 010075 92 GDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF-DERYDVAFGINTLGVIHLVNFAKKCVKLKVFV 158 (519)
Q Consensus 92 gDl~~~~lgls~~~~~~~l~~~vdiViH~Aa~v~f-~~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V 158 (519)
++ . ..+.+.|+||.+|+...- .......+..|+...+.+.+.+.+. ....++
T Consensus 65 ~~---------~-----~a~~~aDvVii~ag~~~~~g~~R~dl~~~n~~i~~~i~~~i~~~-~p~a~i 117 (318)
T 1ez4_A 65 GE---------Y-----SDCKDADLVVITAGAPQKPGESRLDLVNKNLNILSSIVKPVVDS-GFDGIF 117 (318)
T ss_dssp CC---------G-----GGGTTCSEEEECCCC----------CHHHHHHHHHHHHHHHHHT-TCCSEE
T ss_pred CC---------H-----HHhCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHh-CCCeEE
Confidence 11 1 235789999999987532 2233455788999999999888876 344443
|
| >2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A* | Back alignment and structure |
|---|
Probab=91.50 E-value=0.23 Score=49.59 Aligned_cols=36 Identities=14% Similarity=0.148 Sum_probs=29.8
Q ss_pred CCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecC
Q 010075 11 ENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAA 49 (519)
Q Consensus 11 ~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~ 49 (519)
.|.+|+|+|| |.+|..++..+...|. .+|++..|+.
T Consensus 167 ~g~~VlV~Ga-G~vG~~~~q~a~~~Ga--~~Vi~~~~~~ 202 (348)
T 2d8a_A 167 SGKSVLITGA-GPLGLLGIAVAKASGA--YPVIVSEPSD 202 (348)
T ss_dssp TTCCEEEECC-SHHHHHHHHHHHHTTC--CSEEEECSCH
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCC--CEEEEECCCH
Confidence 6899999999 9999999988877773 3788888763
|
| >1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A* | Back alignment and structure |
|---|
Probab=91.10 E-value=0.39 Score=48.25 Aligned_cols=36 Identities=17% Similarity=0.202 Sum_probs=29.9
Q ss_pred CCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCC
Q 010075 11 ENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAAD 50 (519)
Q Consensus 11 ~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~ 50 (519)
.|.+|+|+|+ |.+|..++..+...| .+|++..++..
T Consensus 187 ~g~~VlV~Ga-G~vG~~~~q~a~~~G---a~Vi~~~~~~~ 222 (366)
T 1yqd_A 187 PGKHIGIVGL-GGLGHVAVKFAKAFG---SKVTVISTSPS 222 (366)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHTT---CEEEEEESCGG
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHCC---CEEEEEeCCHH
Confidence 6899999996 999999998887777 57888887653
|
| >3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii} | Back alignment and structure |
|---|
Probab=91.06 E-value=0.3 Score=48.07 Aligned_cols=36 Identities=11% Similarity=0.099 Sum_probs=29.9
Q ss_pred cCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEec
Q 010075 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRA 48 (519)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~ 48 (519)
-.|.+|+|+||+|.+|...+..+...| .+|++..++
T Consensus 151 ~~g~~vlV~Ga~G~vG~~a~q~a~~~G---a~vi~~~~~ 186 (321)
T 3tqh_A 151 KQGDVVLIHAGAGGVGHLAIQLAKQKG---TTVITTASK 186 (321)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHHHTT---CEEEEEECH
T ss_pred CCCCEEEEEcCCcHHHHHHHHHHHHcC---CEEEEEecc
Confidence 468999999999999999998887777 477877654
|
| >1t4b_A Aspartate-semialdehyde dehydrogenase; asadh, HOSR, lysine biosynthesis, NADP+ oxidoreductase (phosphorylating), domain movement; 1.60A {Escherichia coli} SCOP: c.2.1.3 d.81.1.1 PDB: 1t4d_A 1brm_A 1gl3_A* 1nwc_A 1ta4_A 1tb4_A 1ps8_A 1pr3_A 1oza_A 1pqu_A* 1pqp_A 1nwh_A* 1nx6_A* 1pu2_A* 1q2x_A* | Back alignment and structure |
|---|
Probab=90.84 E-value=0.88 Score=45.89 Aligned_cols=36 Identities=14% Similarity=0.337 Sum_probs=27.8
Q ss_pred CEEEEeCCccHHHHHHHHHHHHhC-CCccEEEEEEec
Q 010075 13 KTILVSGVTGFVAKVFIEKILRVQ-PNVKKLYLFVRA 48 (519)
Q Consensus 13 k~VlITGaTGFlG~~Lv~~LL~~g-~~v~~V~~LvR~ 48 (519)
++|.|-||||++|+.|++.||... ..+..|+++...
T Consensus 2 ~kVaIvGAtG~vG~~llr~ll~~~~~~~v~i~~~~~~ 38 (367)
T 1t4b_A 2 QNVGFIGWRGMVGSVLMQRMVEERDFDAIRPVFFSTS 38 (367)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTGGGGSEEEEEESS
T ss_pred cEEEEECCCCHHHHHHHHHHHhcCCCCeEEEEEEEeC
Confidence 589999999999999999666543 245678777654
|
| >1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1 | Back alignment and structure |
|---|
Probab=90.50 E-value=0.55 Score=47.26 Aligned_cols=37 Identities=16% Similarity=0.185 Sum_probs=29.6
Q ss_pred CCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCc
Q 010075 11 ENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADI 51 (519)
Q Consensus 11 ~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~ 51 (519)
.|.+|||+|+ |-+|...+..+...| .+|+++.++...
T Consensus 194 ~g~~VlV~Ga-G~vG~~aiqlak~~G---a~Vi~~~~~~~~ 230 (369)
T 1uuf_A 194 PGKKVGVVGI-GGLGHMGIKLAHAMG---AHVVAFTTSEAK 230 (369)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHTT---CEEEEEESSGGG
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHCC---CEEEEEeCCHHH
Confidence 5889999998 779999888776666 468888886543
|
| >3ldh_A Lactate dehydrogenase; oxidoreductase, CHOH donor, NAD acceptor; HET: NAD; 3.00A {Squalus acanthias} SCOP: i.12.1.1 | Back alignment and structure |
|---|
Probab=90.40 E-value=2.5 Score=41.81 Aligned_cols=114 Identities=15% Similarity=-0.011 Sum_probs=69.2
Q ss_pred CCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEE
Q 010075 11 ENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFV 90 (519)
Q Consensus 11 ~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v 90 (519)
..++|.|+|+ |.+|..++..|+..+. +.+|.++.+.... .+....++.+...| + ...++. .
T Consensus 20 ~~~kV~ViGa-G~vG~~~a~~la~~g~-~~ev~L~Di~~~~---~~g~a~DL~~~~~~-------~------~~~~i~-~ 80 (330)
T 3ldh_A 20 SYNKITVVGC-DAVGMADAISVLMKDL-ADEVALVDVMEDK---LKGEMMDLEHGSLF-------L------HTAKIV-S 80 (330)
T ss_dssp CCCEEEEEST-THHHHHHHHHHHHHCC-CSEEEEECSCHHH---HHHHHHHHHHHGGG-------S------CCSEEE-E
T ss_pred CCCEEEEECC-CHHHHHHHHHHHhCCC-CCeEEEEECCHHH---HHHHHHHhhhhhhc-------c------cCCeEE-E
Confidence 4579999998 9999999999998763 3578888774321 11111111111001 0 012221 1
Q ss_pred eccCCCCCCCCChhhhHHHHhcCccEEEEcCccCCc-cccHHHHHHHhHHHHHHHHHHHHhccCCceEE
Q 010075 91 PGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF-DERYDVAFGINTLGVIHLVNFAKKCVKLKVFV 158 (519)
Q Consensus 91 ~gDl~~~~lgls~~~~~~~l~~~vdiViH~Aa~v~f-~~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V 158 (519)
.+|.. . +.+.|+||-+||..+- .+.-.+.+..|+.-.+.+.+.+.+. ....++
T Consensus 81 t~d~~-------------~-~~daDiVIitaG~p~kpG~tR~dll~~N~~I~k~i~~~I~k~-~P~a~i 134 (330)
T 3ldh_A 81 GKDYS-------------V-SAGSKLVVITAGARQQEGESRLNLVQRNVNIFKFIIPNIVKH-SPDCLK 134 (330)
T ss_dssp ESSSC-------------S-CSSCSEEEECCSCCCCSSCCTTGGGHHHHHHHHHHHHHHHHH-CTTCEE
T ss_pred cCCHH-------------H-hCCCCEEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhh-CCCceE
Confidence 23332 2 4689999999987542 2344566888999999998888776 344433
|
| >3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021} | Back alignment and structure |
|---|
Probab=90.15 E-value=0.57 Score=46.98 Aligned_cols=36 Identities=17% Similarity=0.139 Sum_probs=29.5
Q ss_pred cCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecC
Q 010075 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAA 49 (519)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~ 49 (519)
-.|.+|+|+| +|.+|...+..+...| .+|++..++.
T Consensus 188 ~~g~~VlV~G-~G~vG~~a~qla~~~G---a~Vi~~~~~~ 223 (363)
T 3uog_A 188 RAGDRVVVQG-TGGVALFGLQIAKATG---AEVIVTSSSR 223 (363)
T ss_dssp CTTCEEEEES-SBHHHHHHHHHHHHTT---CEEEEEESCH
T ss_pred CCCCEEEEEC-CCHHHHHHHHHHHHcC---CEEEEEecCc
Confidence 3578999999 8999999888777767 4788888764
|
| >1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A* | Back alignment and structure |
|---|
Probab=89.97 E-value=2.5 Score=41.88 Aligned_cols=118 Identities=14% Similarity=0.081 Sum_probs=67.8
Q ss_pred CCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEEe
Q 010075 12 NKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVP 91 (519)
Q Consensus 12 ~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v~ 91 (519)
.++|.|.|| |.+|..++..|...+. ..|.+..+..... +....++.+ .+. ..+ ...++...
T Consensus 9 ~~kI~VIGa-G~vG~~lA~~la~~g~--~~V~L~D~~~~~~---~~~~~~l~~-----~~~-~~~------~~~~i~~t- 69 (331)
T 1pzg_A 9 RKKVAMIGS-GMIGGTMGYLCALREL--ADVVLYDVVKGMP---EGKALDLSH-----VTS-VVD------TNVSVRAE- 69 (331)
T ss_dssp CCEEEEECC-SHHHHHHHHHHHHHTC--CEEEEECSSSSHH---HHHHHHHHH-----HHH-HTT------CCCCEEEE-
T ss_pred CCEEEEECC-CHHHHHHHHHHHhCCC--CeEEEEECChhHH---HHHHHHHHh-----hhh-ccC------CCCEEEEe-
Confidence 468999998 9999999999998874 2577777765322 111101100 000 000 01222211
Q ss_pred ccCCCCCCCCChhhhHHHHhcCccEEEEcCccCCc-cc-----cHHHHHHHhHHHHHHHHHHHHhccCCceEEEEec
Q 010075 92 GDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF-DE-----RYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVST 162 (519)
Q Consensus 92 gDl~~~~lgls~~~~~~~l~~~vdiViH~Aa~v~f-~~-----~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V~vST 162 (519)
. +. ++.+++.|+||-+++...- .. .-......|+.-.+.+.+.+.+. ....++.++|
T Consensus 70 ~------------d~-~ea~~~aDiVi~a~g~p~~~g~~~~~~~r~dl~~~n~~i~~~i~~~i~~~-~p~a~vi~~t 132 (331)
T 1pzg_A 70 Y------------SY-EAALTGADCVIVTAGLTKVPGKPDSEWSRNDLLPFNSKIIREIGQNIKKY-CPKTFIIVVT 132 (331)
T ss_dssp C------------SH-HHHHTTCSEEEECCSCSSCTTCCGGGCCGGGGHHHHHHHHHHHHHHHHHH-CTTCEEEECC
T ss_pred C------------CH-HHHhCCCCEEEEccCCCCCCCcccCCCCHHHHHHHHHHHHHHHHHHHHHH-CCCcEEEEEc
Confidence 1 22 2346789999999976432 22 22344677888888888887775 3444544443
|
| >3gqv_A Enoyl reductase; medium-chain reductase (MDR superfamily), rossmann fold, NAD binding, oxidoreductase; HET: NAP; 1.74A {Aspergillus terreus} PDB: 3b6z_A* 3b70_A* | Back alignment and structure |
|---|
Probab=89.75 E-value=0.95 Score=45.49 Aligned_cols=34 Identities=15% Similarity=-0.028 Sum_probs=28.5
Q ss_pred cCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEE
Q 010075 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFV 46 (519)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~Lv 46 (519)
-.|.+|+|+||+|.+|...+..+...| .+|++.+
T Consensus 163 ~~g~~VlV~Ga~G~vG~~a~qla~~~G---a~Vi~~~ 196 (371)
T 3gqv_A 163 SKPVYVLVYGGSTATATVTMQMLRLSG---YIPIATC 196 (371)
T ss_dssp SSCCEEEEESTTSHHHHHHHHHHHHTT---CEEEEEE
T ss_pred CCCcEEEEECCCcHHHHHHHHHHHHCC---CEEEEEe
Confidence 467899999999999999988887777 4677776
|
| >1gu7_A Enoyl-[acyl-carrier-protein] reductase [NADPH, B-specific] 1,mitochondrial; oxidoreductase, thioester reduction, fatty acids; 1.70A {Candida tropicalis} SCOP: b.35.1.2 c.2.1.1 PDB: 1guf_A* 1n9g_B* 1n9g_A* 1gyr_A 1h0k_A | Back alignment and structure |
|---|
Probab=89.72 E-value=0.82 Score=45.66 Aligned_cols=38 Identities=13% Similarity=-0.039 Sum_probs=31.1
Q ss_pred CC-CEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCc
Q 010075 11 EN-KTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADI 51 (519)
Q Consensus 11 ~~-k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~ 51 (519)
.| .+|+|+||+|.+|...+..+...| .+|++.+++...
T Consensus 166 ~g~~~VlV~Ga~G~vG~~aiqlak~~G---a~vi~~~~~~~~ 204 (364)
T 1gu7_A 166 PGKDWFIQNGGTSAVGKYASQIGKLLN---FNSISVIRDRPN 204 (364)
T ss_dssp TTTCEEEESCTTSHHHHHHHHHHHHHT---CEEEEEECCCTT
T ss_pred CCCcEEEECCCCcHHHHHHHHHHHHCC---CEEEEEecCccc
Confidence 57 899999999999999888777777 578888876543
|
| >1vkn_A N-acetyl-gamma-glutamyl-phosphate reductase; TM1782, structu genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; 1.80A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.1 | Back alignment and structure |
|---|
Probab=89.69 E-value=0.6 Score=46.75 Aligned_cols=32 Identities=16% Similarity=0.286 Sum_probs=26.6
Q ss_pred CEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEE
Q 010075 13 KTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFV 46 (519)
Q Consensus 13 k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~Lv 46 (519)
.+|.|.||||++|..|++.|.+. |.+ +|..+.
T Consensus 14 ~~V~IvGAtG~vG~ellrlL~~h-P~~-el~~l~ 45 (351)
T 1vkn_A 14 IRAGIIGATGYTGLELVRLLKNH-PEA-KITYLS 45 (351)
T ss_dssp EEEEEESTTSHHHHHHHHHHHHC-TTE-EEEEEE
T ss_pred eEEEEECCCCHHHHHHHHHHHcC-CCc-EEEEEe
Confidence 47999999999999999999875 765 666654
|
| >1xa0_A Putative NADPH dependent oxidoreductases; structural genomics, protein structure initiative, MCSG; HET: DTY; 2.80A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 | Back alignment and structure |
|---|
Probab=89.61 E-value=0.37 Score=47.52 Aligned_cols=37 Identities=19% Similarity=0.219 Sum_probs=30.2
Q ss_pred CC-EEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCc
Q 010075 12 NK-TILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADI 51 (519)
Q Consensus 12 ~k-~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~ 51 (519)
|. +|+|+||+|.+|...+..+...| .+|++..++...
T Consensus 149 g~~~VlV~Ga~G~vG~~~~q~a~~~G---a~vi~~~~~~~~ 186 (328)
T 1xa0_A 149 ERGPVLVTGATGGVGSLAVSMLAKRG---YTVEASTGKAAE 186 (328)
T ss_dssp GGCCEEESSTTSHHHHHHHHHHHHTT---CCEEEEESCTTC
T ss_pred CCceEEEecCCCHHHHHHHHHHHHCC---CEEEEEECCHHH
Confidence 44 89999999999999998877777 468888887543
|
| >3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa} | Back alignment and structure |
|---|
Probab=89.55 E-value=0.62 Score=46.63 Aligned_cols=37 Identities=11% Similarity=0.052 Sum_probs=28.6
Q ss_pred cCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecC
Q 010075 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAA 49 (519)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~ 49 (519)
-.|.+|||+|| |.+|...+..+...|. ++|++..++.
T Consensus 178 ~~g~~VlV~Ga-G~vG~~aiqlak~~Ga--~~Vi~~~~~~ 214 (363)
T 3m6i_A 178 RLGDPVLICGA-GPIGLITMLCAKAAGA--CPLVITDIDE 214 (363)
T ss_dssp CTTCCEEEECC-SHHHHHHHHHHHHTTC--CSEEEEESCH
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHHcCC--CEEEEECCCH
Confidence 36899999998 9999998877776663 3477777654
|
| >2b5w_A Glucose dehydrogenase; nucleotide binding motif, oxidoreductase; HET: FLC NAP; 1.60A {Haloferax mediterranei} PDB: 2b5v_A* 2vwg_A* 2vwh_A* 2vwp_A* 2vwq_A* | Back alignment and structure |
|---|
Probab=89.37 E-value=1 Score=44.87 Aligned_cols=35 Identities=17% Similarity=0.112 Sum_probs=27.4
Q ss_pred CEEEEeCCccHHHHHH-HHHH-HHhCCCccEEEEEEecCC
Q 010075 13 KTILVSGVTGFVAKVF-IEKI-LRVQPNVKKLYLFVRAAD 50 (519)
Q Consensus 13 k~VlITGaTGFlG~~L-v~~L-L~~g~~v~~V~~LvR~~~ 50 (519)
.+|+|+|| |.+|... +..+ ...| ..+|+++.++..
T Consensus 174 ~~VlV~Ga-G~vG~~a~iqla~k~~G--a~~Vi~~~~~~~ 210 (357)
T 2b5w_A 174 SSAFVLGN-GSLGLLTLAMLKVDDKG--YENLYCLGRRDR 210 (357)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHCTTC--CCEEEEEECCCS
T ss_pred CEEEEECC-CHHHHHHHHHHHHHHcC--CcEEEEEeCCcc
Confidence 89999999 9999988 7655 4445 245899998765
|
| >3don_A Shikimate dehydrogenase; alpha-beta structure, rossman fold, amino-acid biosynthesis, amino acid biosynthesis, NADP, oxidoreductase; 2.10A {Staphylococcus epidermidis} PDB: 3doo_A* | Back alignment and structure |
|---|
Probab=88.99 E-value=0.23 Score=48.18 Aligned_cols=38 Identities=21% Similarity=0.326 Sum_probs=31.7
Q ss_pred cCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCC
Q 010075 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAAD 50 (519)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~ 50 (519)
.+|++|+|+|+ |.+|+.++..|.+.|. .+|++..|+..
T Consensus 115 l~~k~vlvlGa-Gg~g~aia~~L~~~G~--~~v~v~~R~~~ 152 (277)
T 3don_A 115 IEDAYILILGA-GGASKGIANELYKIVR--PTLTVANRTMS 152 (277)
T ss_dssp GGGCCEEEECC-SHHHHHHHHHHHTTCC--SCCEEECSCGG
T ss_pred cCCCEEEEECC-cHHHHHHHHHHHHCCC--CEEEEEeCCHH
Confidence 46899999996 8899999999999874 46788888753
|
| >3rui_A Ubiquitin-like modifier-activating enzyme ATG7; autophagosome formation, non-canonical E1, ATP BI UBL, ATG8, ATG12, ATG10, ATG3, UBL activation, thiolation; 1.91A {Saccharomyces cerevisiae} PDB: 3t7e_A 3vh3_A 3vh4_A* | Back alignment and structure |
|---|
Probab=88.93 E-value=1.9 Score=42.78 Aligned_cols=39 Identities=15% Similarity=0.330 Sum_probs=32.1
Q ss_pred hhcCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecC
Q 010075 8 EFLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAA 49 (519)
Q Consensus 8 ~~~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~ 49 (519)
+-+++++|+|.|+ |.+|..+++.|.+.| |.+|.++.+..
T Consensus 30 ~kL~~~~VlIvGa-GGlGs~va~~La~aG--Vg~ItlvD~D~ 68 (340)
T 3rui_A 30 DIIKNTKVLLLGA-GTLGCYVSRALIAWG--VRKITFVDNGT 68 (340)
T ss_dssp HHHHTCEEEEECC-SHHHHHHHHHHHHTT--CCEEEEECCCB
T ss_pred HHHhCCEEEEECC-CHHHHHHHHHHHHcC--CCEEEEecCCE
Confidence 3467899999995 779999999999976 68998887654
|
| >1guz_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle, NAD; HET: NAD; 2.0A {Chlorobium vibrioforme} SCOP: c.2.1.5 d.162.1.1 PDB: 1gv1_A 1gv0_A* | Back alignment and structure |
|---|
Probab=88.81 E-value=5.1 Score=39.07 Aligned_cols=107 Identities=17% Similarity=0.067 Sum_probs=64.2
Q ss_pred CEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEEec
Q 010075 13 KTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVPG 92 (519)
Q Consensus 13 k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v~g 92 (519)
|+|.|.|| |.+|..++..|.+.+. ..+|.+..|+..... .+..++.+. . . ... ...++... .
T Consensus 1 mkI~VIGa-G~vG~~la~~la~~~~-g~~V~l~D~~~~~~~---~~~~~l~~~-~----~-~~~------~~~~i~~t-~ 62 (310)
T 1guz_A 1 MKITVIGA-GNVGATTAFRLAEKQL-ARELVLLDVVEGIPQ---GKALDMYES-G----P-VGL------FDTKVTGS-N 62 (310)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTC-CSEEEEECSSSSHHH---HHHHHHHTT-H----H-HHT------CCCEEEEE-S
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCC-CCEEEEEeCChhHHH---HHHHhHHhh-h----h-ccc------CCcEEEEC-C
Confidence 47999998 9999999999887522 268899988754322 111111110 0 0 000 01112111 1
Q ss_pred cCCCCCCCCChhhhHHHHhcCccEEEEcCccCCc-cccHHHHHHHhHHHHHHHHHHHHhc
Q 010075 93 DISSEDLGLKDSNLKEELWNELDIMVNSAAITKF-DERYDVAFGINTLGVIHLVNFAKKC 151 (519)
Q Consensus 93 Dl~~~~lgls~~~~~~~l~~~vdiViH~Aa~v~f-~~~~~~~~~~Nv~gt~~ll~~a~~~ 151 (519)
| . +. +++.|+||-+++.... .......+..|+.-.+.+.+.+.+.
T Consensus 63 d------------~-~~-l~~aDvViiav~~p~~~g~~r~dl~~~n~~i~~~i~~~i~~~ 108 (310)
T 1guz_A 63 D------------Y-AD-TANSDIVIITAGLPRKPGMTREDLLMKNAGIVKEVTDNIMKH 108 (310)
T ss_dssp C------------G-GG-GTTCSEEEECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred C------------H-HH-HCCCCEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHh
Confidence 1 1 13 5689999999986432 3335566788998888888887765
|
| >3gxh_A Putative phosphatase (DUF442); YP_001181608.1, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.40A {Shewanella putrefaciens cn-32} PDB: 3gxg_A* | Back alignment and structure |
|---|
Probab=88.80 E-value=0.24 Score=43.56 Aligned_cols=73 Identities=8% Similarity=0.121 Sum_probs=42.8
Q ss_pred ccHHHHHHHHHHHHhCCCccEEEEEEecCCccc----HHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEEeccCCC
Q 010075 21 TGFVAKVFIEKILRVQPNVKKLYLFVRAADIDS----AALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVPGDISS 96 (519)
Q Consensus 21 TGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~----~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v~gDl~~ 96 (519)
+|.++...++.|.+.| .+|++..|+..... ..+.+. +. ..+...+.+|+++
T Consensus 25 s~~p~~a~a~~La~~G---a~vvi~~r~~~e~~~~~~~~~~~~--------------~~--------G~~~~~i~~Dv~~ 79 (157)
T 3gxh_A 25 SGLPNEQQFSLLKQAG---VDVVINLMPDSSKDAHPDEGKLVT--------------QA--------GMDYVYIPVDWQN 79 (157)
T ss_dssp EBCCCHHHHHHHHHTT---CCEEEECSCTTSTTSCTTHHHHHH--------------HT--------TCEEEECCCCTTS
T ss_pred cCCCCHHHHHHHHHcC---CCEEEECCCcccccccccHHHHHH--------------Hc--------CCeEEEecCCCCC
Confidence 3568899999999988 45566666543321 111111 11 2456778889987
Q ss_pred CCCCCChhhh---HHHH---hcCccEEEEcCcc
Q 010075 97 EDLGLKDSNL---KEEL---WNELDIMVNSAAI 123 (519)
Q Consensus 97 ~~lgls~~~~---~~~l---~~~vdiViH~Aa~ 123 (519)
+. .++. .+.+ ..+ |++|||||.
T Consensus 80 ~~----~~~v~~~~~~i~~~~G~-dVLVnnAgg 107 (157)
T 3gxh_A 80 PK----VEDVEAFFAAMDQHKGK-DVLVHCLAN 107 (157)
T ss_dssp CC----HHHHHHHHHHHHHTTTS-CEEEECSBS
T ss_pred CC----HHHHHHHHHHHHhcCCC-CEEEECCCC
Confidence 51 1221 1112 235 999999985
|
| >2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus} | Back alignment and structure |
|---|
Probab=88.62 E-value=0.54 Score=46.68 Aligned_cols=35 Identities=17% Similarity=0.265 Sum_probs=29.4
Q ss_pred CCCEEEEeCCccHHHHHHHHHHHHh--CCCccEEEEEEecC
Q 010075 11 ENKTILVSGVTGFVAKVFIEKILRV--QPNVKKLYLFVRAA 49 (519)
Q Consensus 11 ~~k~VlITGaTGFlG~~Lv~~LL~~--g~~v~~V~~LvR~~ 49 (519)
.|.+|||+|| |.+|...+..+... | .+|++..++.
T Consensus 170 ~g~~VlV~Ga-G~vG~~aiqlak~~~~G---a~Vi~~~~~~ 206 (344)
T 2h6e_A 170 AEPVVIVNGI-GGLAVYTIQILKALMKN---ITIVGISRSK 206 (344)
T ss_dssp SSCEEEEECC-SHHHHHHHHHHHHHCTT---CEEEEECSCH
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHhcCC---CEEEEEeCCH
Confidence 7899999999 99999998877777 6 4788888764
|
| >1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1 | Back alignment and structure |
|---|
Probab=88.53 E-value=0.88 Score=45.27 Aligned_cols=36 Identities=19% Similarity=0.120 Sum_probs=28.5
Q ss_pred cCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecC
Q 010075 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAA 49 (519)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~ 49 (519)
-.|.+|||+|+ |.+|...+..+...| .+|++..++.
T Consensus 167 ~~g~~VlV~Ga-G~vG~~a~qla~~~G---a~Vi~~~~~~ 202 (352)
T 1e3j_A 167 QLGTTVLVIGA-GPIGLVSVLAAKAYG---AFVVCTARSP 202 (352)
T ss_dssp CTTCEEEEECC-SHHHHHHHHHHHHTT---CEEEEEESCH
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHHcC---CEEEEEcCCH
Confidence 36899999997 899999888777666 4578877653
|
| >2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A* | Back alignment and structure |
|---|
Probab=88.29 E-value=0.82 Score=45.68 Aligned_cols=36 Identities=8% Similarity=0.037 Sum_probs=29.9
Q ss_pred CCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCC
Q 010075 11 ENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAAD 50 (519)
Q Consensus 11 ~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~ 50 (519)
.|.+|+|+|+ |-+|...+..+...| .+|++..++..
T Consensus 180 ~g~~VlV~Ga-G~vG~~a~qlak~~G---a~Vi~~~~~~~ 215 (357)
T 2cf5_A 180 PGLRGGILGL-GGVGHMGVKIAKAMG---HHVTVISSSNK 215 (357)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHHT---CEEEEEESSTT
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHCC---CeEEEEeCChH
Confidence 6899999996 899999998777777 57888888754
|
| >1lnq_A MTHK channels, potassium channel related protein; rossman fold, helix bundle, membrane protein; 3.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.2.1.9 d.286.1.1 f.14.1.1 PDB: 3rbz_A | Back alignment and structure |
|---|
Probab=88.10 E-value=0.56 Score=46.47 Aligned_cols=71 Identities=10% Similarity=0.060 Sum_probs=48.5
Q ss_pred CCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEEe
Q 010075 12 NKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVP 91 (519)
Q Consensus 12 ~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v~ 91 (519)
.++|+|.|+ |-+|+.+++.|.+.+ . |.++.+++.. .+ +. ...+.++.
T Consensus 115 ~~~viI~G~-G~~g~~l~~~L~~~g---~-v~vid~~~~~---~~-~~------------------------~~~~~~i~ 161 (336)
T 1lnq_A 115 SRHVVICGW-SESTLECLRELRGSE---V-FVLAEDENVR---KK-VL------------------------RSGANFVH 161 (336)
T ss_dssp -CEEEEESC-CHHHHHHHTTGGGSC---E-EEEESCGGGH---HH-HH------------------------HTTCEEEE
T ss_pred cCCEEEECC-cHHHHHHHHHHHhCC---c-EEEEeCChhh---hh-HH------------------------hCCcEEEE
Confidence 458999996 999999999999876 4 5666554321 11 22 14678999
Q ss_pred ccCCCCCCCCChhhhHHHH-hcCccEEEEcCc
Q 010075 92 GDISSEDLGLKDSNLKEEL-WNELDIMVNSAA 122 (519)
Q Consensus 92 gDl~~~~lgls~~~~~~~l-~~~vdiViH~Aa 122 (519)
||.++ ++..++. .++.|.|+-+.+
T Consensus 162 gd~~~-------~~~L~~a~i~~a~~vi~~~~ 186 (336)
T 1lnq_A 162 GDPTR-------VSDLEKANVRGARAVIVDLE 186 (336)
T ss_dssp SCTTS-------HHHHHHTCSTTEEEEEECCS
T ss_pred eCCCC-------HHHHHhcChhhccEEEEcCC
Confidence 99994 4433344 578898886653
|
| >2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A* | Back alignment and structure |
|---|
Probab=88.09 E-value=0.66 Score=46.97 Aligned_cols=36 Identities=11% Similarity=0.058 Sum_probs=31.0
Q ss_pred cCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecC
Q 010075 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAA 49 (519)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~ 49 (519)
+.|++|+|+|+ |-+|..+++.+...| .+|++..|+.
T Consensus 166 l~g~~V~ViG~-G~iG~~~a~~a~~~G---a~V~~~d~~~ 201 (377)
T 2vhw_A 166 VEPADVVVIGA-GTAGYNAARIANGMG---ATVTVLDINI 201 (377)
T ss_dssp BCCCEEEEECC-SHHHHHHHHHHHHTT---CEEEEEESCH
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHhCC---CEEEEEeCCH
Confidence 57899999998 999999999999877 4788887763
|
| >4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A* | Back alignment and structure |
|---|
Probab=88.07 E-value=0.59 Score=47.06 Aligned_cols=37 Identities=16% Similarity=0.193 Sum_probs=28.7
Q ss_pred cCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecC
Q 010075 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAA 49 (519)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~ 49 (519)
-.|.+|||+|| |.+|...+..+...|. .+|++..++.
T Consensus 181 ~~g~~VlV~Ga-G~vG~~aiqlak~~Ga--~~Vi~~~~~~ 217 (370)
T 4ej6_A 181 KAGSTVAILGG-GVIGLLTVQLARLAGA--TTVILSTRQA 217 (370)
T ss_dssp CTTCEEEEECC-SHHHHHHHHHHHHTTC--SEEEEECSCH
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHHcCC--CEEEEECCCH
Confidence 36899999998 9999998887777663 4777776653
|
| >3vh1_A Ubiquitin-like modifier-activating enzyme ATG7; autophagy, zinc binding, metal binding protein; 3.00A {Saccharomyces cerevisiae} PDB: 3vh2_A | Back alignment and structure |
|---|
Probab=88.01 E-value=2.2 Score=45.56 Aligned_cols=38 Identities=16% Similarity=0.334 Sum_probs=31.0
Q ss_pred hhcCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEec
Q 010075 8 EFLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRA 48 (519)
Q Consensus 8 ~~~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~ 48 (519)
+-+++++|+|.|+ |.+|..+++.|.+.| |++|.++...
T Consensus 323 ~kL~~~kVLIVGa-GGLGs~va~~La~aG--VG~ItLvD~D 360 (598)
T 3vh1_A 323 DIIKNTKVLLLGA-GTLGCYVSRALIAWG--VRKITFVDNG 360 (598)
T ss_dssp HHHHTCEEEEECC-SHHHHHHHHHHHTTT--CCEEEEECCS
T ss_pred HHHhCCeEEEECC-CHHHHHHHHHHHHcC--CCEEEEECCC
Confidence 4467799999995 679999999999876 6889888443
|
| >3p2o_A Bifunctional protein fold; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta-alpha sandwich; HET: NAD; 2.23A {Campylobacter jejuni subsp} | Back alignment and structure |
|---|
Probab=87.99 E-value=1 Score=43.47 Aligned_cols=34 Identities=18% Similarity=0.315 Sum_probs=29.2
Q ss_pred cCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEE
Q 010075 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFV 46 (519)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~Lv 46 (519)
++|++++|.|++|.+|+.++..|++.+ .+|++.-
T Consensus 158 l~Gk~vvVvGrs~iVG~p~A~lL~~~g---AtVtv~h 191 (285)
T 3p2o_A 158 LEGKDAVIIGASNIVGRPMATMLLNAG---ATVSVCH 191 (285)
T ss_dssp CTTCEEEEECCCTTTHHHHHHHHHHTT---CEEEEEC
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCC---CeEEEEe
Confidence 589999999999999999999999987 4566543
|
| >1a5z_A L-lactate dehydrogenase; oxidoreductase, glycolysis, hyperthermophiles, thermotoga MA protein stability; HET: FBP NAD; 2.10A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.1 | Back alignment and structure |
|---|
Probab=87.87 E-value=6.8 Score=38.33 Aligned_cols=105 Identities=14% Similarity=0.092 Sum_probs=63.1
Q ss_pred CEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEEec
Q 010075 13 KTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVPG 92 (519)
Q Consensus 13 k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v~g 92 (519)
|+|.|.|+ |.+|..++..|+..+. ..+|++..|+... .+.+..++. ...+ + .....+...
T Consensus 1 mkI~VIGa-G~~G~~la~~l~~~g~-~~~V~l~D~~~~~---~~~~~~~l~---------~~~~--~----~~~~~i~~~ 60 (319)
T 1a5z_A 1 MKIGIVGL-GRVGSSTAFALLMKGF-AREMVLIDVDKKR---AEGDALDLI---------HGTP--F----TRRANIYAG 60 (319)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHHTC-CSEEEEECSSHHH---HHHHHHHHH---------HHGG--G----SCCCEEEEC
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCC-CCeEEEEeCChHH---HHHHHHHHH---------hhhh--h----cCCcEEEeC
Confidence 57999997 9999999999999884 3478888876321 122111110 0000 0 011111111
Q ss_pred cCCCCCCCCChhhhHHHHhcCccEEEEcCccCCcc-ccHHHHHHHhHHHHHHHHHHHHhc
Q 010075 93 DISSEDLGLKDSNLKEELWNELDIMVNSAAITKFD-ERYDVAFGINTLGVIHLVNFAKKC 151 (519)
Q Consensus 93 Dl~~~~lgls~~~~~~~l~~~vdiViH~Aa~v~f~-~~~~~~~~~Nv~gt~~ll~~a~~~ 151 (519)
| . ..+++.|+||-+++..... ..-......|+...+.+++...+.
T Consensus 61 d---------~-----~~~~~aDvViiav~~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~ 106 (319)
T 1a5z_A 61 D---------Y-----ADLKGSDVVIVAAGVPQKPGETRLQLLGRNARVMKEIARNVSKY 106 (319)
T ss_dssp C---------G-----GGGTTCSEEEECCCCCCCSSCCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred C---------H-----HHhCCCCEEEEccCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhh
Confidence 1 1 2246899999998875422 223455778888888888887765
|
| >3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori} | Back alignment and structure |
|---|
Probab=87.82 E-value=0.63 Score=46.27 Aligned_cols=39 Identities=13% Similarity=0.254 Sum_probs=31.3
Q ss_pred cCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcc
Q 010075 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADID 52 (519)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~ 52 (519)
-.|.+|+|+|+ |-+|...+..+...| .+|++..++....
T Consensus 175 ~~g~~VlV~Ga-G~vG~~a~qla~~~G---a~Vi~~~~~~~~~ 213 (348)
T 3two_A 175 TKGTKVGVAGF-GGLGSMAVKYAVAMG---AEVSVFARNEHKK 213 (348)
T ss_dssp CTTCEEEEESC-SHHHHHHHHHHHHTT---CEEEEECSSSTTH
T ss_pred CCCCEEEEECC-cHHHHHHHHHHHHCC---CeEEEEeCCHHHH
Confidence 36899999997 999999888777766 4789988876543
|
| >3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A* | Back alignment and structure |
|---|
Probab=87.79 E-value=0.9 Score=44.93 Aligned_cols=36 Identities=11% Similarity=0.131 Sum_probs=29.3
Q ss_pred cCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecC
Q 010075 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAA 49 (519)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~ 49 (519)
-.|.+|+|+|+ |.+|...+..+...| .+|++..++.
T Consensus 165 ~~g~~VlV~Ga-G~vG~~a~qla~~~G---a~Vi~~~~~~ 200 (340)
T 3s2e_A 165 RPGQWVVISGI-GGLGHVAVQYARAMG---LRVAAVDIDD 200 (340)
T ss_dssp CTTSEEEEECC-STTHHHHHHHHHHTT---CEEEEEESCH
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHHCC---CeEEEEeCCH
Confidence 36899999997 789999888777777 4888888764
|
| >3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima} | Back alignment and structure |
|---|
Probab=87.54 E-value=1 Score=45.85 Aligned_cols=37 Identities=11% Similarity=0.143 Sum_probs=28.8
Q ss_pred cCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecC
Q 010075 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAA 49 (519)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~ 49 (519)
-.|.+|+|+|| |.+|...+..+...|. .+|++..++.
T Consensus 212 ~~g~~VlV~Ga-G~vG~~aiqlak~~Ga--~~Vi~~~~~~ 248 (404)
T 3ip1_A 212 RPGDNVVILGG-GPIGLAAVAILKHAGA--SKVILSEPSE 248 (404)
T ss_dssp CTTCEEEEECC-SHHHHHHHHHHHHTTC--SEEEEECSCH
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHHcCC--CEEEEECCCH
Confidence 35789999998 9999998877766663 4788877654
|
| >1tt5_A APPBP1, amyloid protein-binding protein 1; cell cycle, ligase; 2.60A {Homo sapiens} SCOP: c.111.1.2 PDB: 3dbh_A 3dbl_A 3dbr_A 1r4m_A 1r4n_A* 2nvu_A* 1yov_A 3gzn_A* | Back alignment and structure |
|---|
Probab=87.29 E-value=1.2 Score=47.15 Aligned_cols=126 Identities=10% Similarity=0.085 Sum_probs=70.2
Q ss_pred hhcCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHh-h---------hhhHHHHHhhhcc
Q 010075 8 EFLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVL-A---------KDVFNVLKEKWGT 77 (519)
Q Consensus 8 ~~~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~-~---------~~~f~~l~~~~~~ 77 (519)
+-+++.+|+|.|+ |.+|..+++.|.+.| |++|.++....-..+-..| +++ . ...-+++++..|
T Consensus 28 ~~L~~~~VlvvG~-GGlGseiak~La~aG--Vg~itlvD~D~Ve~sNL~R---Q~l~~~~dvG~~Ka~~a~~~l~~lNp- 100 (531)
T 1tt5_A 28 EALESAHVCLINA-TATGTEILKNLVLPG--IGSFTIIDGNQVSGEDAGN---NFFLQRSSIGKNRAEAAMEFLQELNS- 100 (531)
T ss_dssp HHHHHCEEEEECC-SHHHHHHHHHHHTTT--CSEEEEECCCBBCHHHHHH---CTTCCGGGBTSBHHHHHHHHHHTTCT-
T ss_pred HHHhcCeEEEECc-CHHHHHHHHHHHHcC--CCeEEEEeCCEechhhccc---CccCChhhcCcHHHHHHHHHHHHhCC-
Confidence 3356789999996 679999999999976 6888887654422221211 111 0 001133343333
Q ss_pred ccccccCCceEEEeccCCCCCCCCChhhhHHHHhcCccEEEEcCccCCccccHHHHHHHhHHHHHHHHHHHHhccCCceE
Q 010075 78 RLNSFISEKITFVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKFDERYDVAFGINTLGVIHLVNFAKKCVKLKVF 157 (519)
Q Consensus 78 ~~~~~~~~~v~~v~gDl~~~~lgls~~~~~~~l~~~vdiViH~Aa~v~f~~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~ 157 (519)
.-++..+..++.+. .... ..++.++|+||.+.. +... -..+-++|.+. + ..+
T Consensus 101 ------~v~v~~~~~~~~~~-----~~~~-~~~~~~~DvVi~~~d------~~~~--------r~~ln~~c~~~-~-ipl 152 (531)
T 1tt5_A 101 ------DVSGSFVEESPENL-----LDND-PSFFCRFTVVVATQL------PEST--------SLRLADVLWNS-Q-IPL 152 (531)
T ss_dssp ------TSBCCEESSCHHHH-----HHSC-GGGGGGCSEEEEESC------CHHH--------HHHHHHHHHHT-T-CCE
T ss_pred ------CCeEEEeCCCcchh-----hhhh-HHHhcCCCEEEEeCC------CHHH--------HHHHHHHHHHc-C-CCE
Confidence 13455555554310 0111 245678999998842 2222 22344567764 3 568
Q ss_pred EEEecceeecC
Q 010075 158 VHVSTAYVAGE 168 (519)
Q Consensus 158 V~vSTa~v~~~ 168 (519)
|+.++....|.
T Consensus 153 I~~~~~G~~G~ 163 (531)
T 1tt5_A 153 LICRTYGLVGY 163 (531)
T ss_dssp EEEEEETTEEE
T ss_pred EEEEecCCeEE
Confidence 88877666553
|
| >3nx4_A Putative oxidoreductase; csgid, structural genomics, center for struc genomics of infectious diseases, PSI, protein structure INI; HET: MSE NAP; 1.90A {Salmonella enterica subsp} PDB: 1o89_A 1o8c_A* | Back alignment and structure |
|---|
Probab=87.04 E-value=0.6 Score=45.83 Aligned_cols=36 Identities=11% Similarity=0.218 Sum_probs=29.4
Q ss_pred CCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCc
Q 010075 12 NKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADI 51 (519)
Q Consensus 12 ~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~ 51 (519)
|+ |+|+||+|.+|...+..+...| .+|++..++...
T Consensus 148 g~-VlV~Ga~G~vG~~aiqla~~~G---a~Vi~~~~~~~~ 183 (324)
T 3nx4_A 148 GE-VVVTGASGGVGSTAVALLHKLG---YQVAAVSGREST 183 (324)
T ss_dssp CC-EEESSTTSHHHHHHHHHHHHTT---CCEEEEESCGGG
T ss_pred Ce-EEEECCCcHHHHHHHHHHHHcC---CEEEEEeCCHHH
Confidence 35 9999999999999888887777 478888887543
|
| >1gpj_A Glutamyl-tRNA reductase; tRNA-dependent tetrapyrrole biosynthesis; HET: GMC CIT; 1.95A {Methanopyrus kandleri} SCOP: a.151.1.1 c.2.1.7 d.58.39.1 | Back alignment and structure |
|---|
Probab=86.85 E-value=1.1 Score=45.75 Aligned_cols=37 Identities=24% Similarity=0.372 Sum_probs=31.9
Q ss_pred cCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecC
Q 010075 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAA 49 (519)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~ 49 (519)
..|++|+|.|+ |-+|+.++..|...|. .+|++..|+.
T Consensus 165 l~g~~VlIiGa-G~iG~~~a~~l~~~G~--~~V~v~~r~~ 201 (404)
T 1gpj_A 165 LHDKTVLVVGA-GEMGKTVAKSLVDRGV--RAVLVANRTY 201 (404)
T ss_dssp CTTCEEEEESC-CHHHHHHHHHHHHHCC--SEEEEECSSH
T ss_pred ccCCEEEEECh-HHHHHHHHHHHHHCCC--CEEEEEeCCH
Confidence 57999999997 9999999999998873 4888888864
|
| >1zsy_A Mitochondrial 2-enoyl thioester reductase; medium-chain dehydrogenase/reductase, oxidoreductase, 2-ENOY thioester reductase; 1.75A {Homo sapiens} PDB: 2vcy_A | Back alignment and structure |
|---|
Probab=86.75 E-value=1.3 Score=44.18 Aligned_cols=37 Identities=11% Similarity=0.110 Sum_probs=30.2
Q ss_pred CCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCC
Q 010075 11 ENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAAD 50 (519)
Q Consensus 11 ~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~ 50 (519)
.|.+|||+||+|-+|...+..+...| .++++.+++..
T Consensus 167 ~g~~VlV~Ga~G~vG~~aiqlak~~G---a~vi~~~~~~~ 203 (357)
T 1zsy_A 167 PGDSVIQNASNSGVGQAVIQIAAALG---LRTINVVRDRP 203 (357)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHHT---CEEEEEECCCS
T ss_pred CCCEEEEeCCcCHHHHHHHHHHHHcC---CEEEEEecCcc
Confidence 68899999999999999888776667 56777777643
|
| >1p77_A Shikimate 5-dehydrogenase; NADPH, oxidoreductase; HET: ATR; 1.95A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5 PDB: 1p74_A* | Back alignment and structure |
|---|
Probab=86.58 E-value=0.55 Score=45.17 Aligned_cols=36 Identities=25% Similarity=0.336 Sum_probs=31.7
Q ss_pred cCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecC
Q 010075 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAA 49 (519)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~ 49 (519)
+++++|+|+|+ |.+|+.++..|++.| .+|++..|+.
T Consensus 117 ~~~~~vlvlGa-Gg~g~a~a~~L~~~G---~~v~v~~R~~ 152 (272)
T 1p77_A 117 RPNQHVLILGA-GGATKGVLLPLLQAQ---QNIVLANRTF 152 (272)
T ss_dssp CTTCEEEEECC-SHHHHTTHHHHHHTT---CEEEEEESSH
T ss_pred cCCCEEEEECC-cHHHHHHHHHHHHCC---CEEEEEECCH
Confidence 46899999997 789999999999988 6889988874
|
| >3iup_A Putative NADPH:quinone oxidoreductase; YP_296108.1, structur genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE NDP; 1.70A {Ralstonia eutropha} | Back alignment and structure |
|---|
Probab=86.38 E-value=0.63 Score=47.01 Aligned_cols=37 Identities=24% Similarity=0.261 Sum_probs=30.2
Q ss_pred cCCCEEEEeC-CccHHHHHHHHHHHHhCCCccEEEEEEecC
Q 010075 10 LENKTILVSG-VTGFVAKVFIEKILRVQPNVKKLYLFVRAA 49 (519)
Q Consensus 10 ~~~k~VlITG-aTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~ 49 (519)
-.|.+|+|.| |+|-+|...+..+...| .+|++..++.
T Consensus 169 ~~g~~vlV~gag~G~vG~~a~q~a~~~G---a~Vi~~~~~~ 206 (379)
T 3iup_A 169 LEGHSALVHTAAASNLGQMLNQICLKDG---IKLVNIVRKQ 206 (379)
T ss_dssp HTTCSCEEESSTTSHHHHHHHHHHHHHT---CCEEEEESSH
T ss_pred cCCCEEEEECCCCCHHHHHHHHHHHHCC---CEEEEEECCH
Confidence 3678999997 99999999988887777 4688888763
|
| >2v6b_A L-LDH, L-lactate dehydrogenase; oxidoreductase, radioresistance, NAD, cytoplasm, mesophilic, glycolysis; 2.50A {Deinococcus radiodurans} | Back alignment and structure |
|---|
Probab=86.10 E-value=1 Score=44.01 Aligned_cols=111 Identities=16% Similarity=0.084 Sum_probs=60.4
Q ss_pred CEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEEec
Q 010075 13 KTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVPG 92 (519)
Q Consensus 13 k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v~g 92 (519)
++|.|.|| |.+|..++..|+..+. +.+|.++.++. ++++....+ +.... .. ...+.+..+
T Consensus 1 mkI~VIGa-G~vG~~la~~la~~g~-~~eV~L~D~~~------~~~~~~~~~------l~~~~-----~~-~~~~~i~~~ 60 (304)
T 2v6b_A 1 MKVGVVGT-GFVGSTAAFALVLRGS-CSELVLVDRDE------DRAQAEAED------IAHAA-----PV-SHGTRVWHG 60 (304)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTC-CSEEEEECSSH------HHHHHHHHH------HTTSC-----CT-TSCCEEEEE
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCC-CCEEEEEeCCH------HHHHHHHHh------hhhhh-----hh-cCCeEEEEC
Confidence 57999998 9999999999988774 34788887763 122111100 00000 00 011222111
Q ss_pred cCCCCCCCCChhhhHHHHhcCccEEEEcCccCC-ccccHHHHHHHhHHHHHHHHHHHHhccCCceEE
Q 010075 93 DISSEDLGLKDSNLKEELWNELDIMVNSAAITK-FDERYDVAFGINTLGVIHLVNFAKKCVKLKVFV 158 (519)
Q Consensus 93 Dl~~~~lgls~~~~~~~l~~~vdiViH~Aa~v~-f~~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V 158 (519)
| . ..+++.|+||-+++... ........+..|+...+.+.+.+.+. ....++
T Consensus 61 ~------------~--~a~~~aDvVIi~~~~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~-~p~~~v 112 (304)
T 2v6b_A 61 G------------H--SELADAQVVILTAGANQKPGESRLDLLEKNADIFRELVPQITRA-APDAVL 112 (304)
T ss_dssp C------------G--GGGTTCSEEEECC------------CHHHHHHHHHHHHHHHHHH-CSSSEE
T ss_pred C------------H--HHhCCCCEEEEcCCCCCCCCCcHHHHHHhHHHHHHHHHHHHHHh-CCCeEE
Confidence 1 1 23568999999997543 22333445778888888888888775 334343
|
| >4dvj_A Putative zinc-dependent alcohol dehydrogenase Pro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.99A {Rhizobium etli} | Back alignment and structure |
|---|
Probab=85.81 E-value=0.46 Score=47.75 Aligned_cols=36 Identities=14% Similarity=0.144 Sum_probs=28.2
Q ss_pred CCCEEEEeCCccHHHHHHHHHHHHh-CCCccEEEEEEecC
Q 010075 11 ENKTILVSGVTGFVAKVFIEKILRV-QPNVKKLYLFVRAA 49 (519)
Q Consensus 11 ~~k~VlITGaTGFlG~~Lv~~LL~~-g~~v~~V~~LvR~~ 49 (519)
.|.+|+|+||+|.+|...+..+... + .+|++..++.
T Consensus 171 ~g~~VlV~Ga~G~vG~~a~qlak~~~g---~~Vi~~~~~~ 207 (363)
T 4dvj_A 171 AAPAILIVGGAGGVGSIAVQIARQRTD---LTVIATASRP 207 (363)
T ss_dssp SEEEEEEESTTSHHHHHHHHHHHHHCC---SEEEEECSSH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHhcC---CEEEEEeCCH
Confidence 5789999999999998877655442 4 5888888753
|
| >3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium} | Back alignment and structure |
|---|
Probab=85.76 E-value=2 Score=39.97 Aligned_cols=35 Identities=23% Similarity=0.359 Sum_probs=29.0
Q ss_pred cCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEec
Q 010075 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRA 48 (519)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~ 48 (519)
++|++|+|.|| |-+|...++.|++.|. +|+++...
T Consensus 29 L~gk~VLVVGg-G~va~~ka~~Ll~~GA---~VtVvap~ 63 (223)
T 3dfz_A 29 LKGRSVLVVGG-GTIATRRIKGFLQEGA---AITVVAPT 63 (223)
T ss_dssp CTTCCEEEECC-SHHHHHHHHHHGGGCC---CEEEECSS
T ss_pred cCCCEEEEECC-CHHHHHHHHHHHHCCC---EEEEECCC
Confidence 68999999994 8899999999999984 55666543
|
| >1y81_A Conserved hypothetical protein; hyperthermophIle, structural genomics, PSI, protein structure initiative; HET: COA; 1.70A {Pyrococcus furiosus} SCOP: c.2.1.8 | Back alignment and structure |
|---|
Probab=85.75 E-value=2.5 Score=36.07 Aligned_cols=39 Identities=10% Similarity=0.118 Sum_probs=28.5
Q ss_pred hhhcCCCEEEEeCCc---cHHHHHHHHHHHHhCCCccEEEEEEec
Q 010075 7 VEFLENKTILVSGVT---GFVAKVFIEKILRVQPNVKKLYLFVRA 48 (519)
Q Consensus 7 ~~~~~~k~VlITGaT---GFlG~~Lv~~LL~~g~~v~~V~~LvR~ 48 (519)
..+++.++|.|.|+| |-+|..+++.|++.|. +||...++
T Consensus 9 ~~l~~p~~IavIGaS~~~g~~G~~~~~~L~~~G~---~V~~vnp~ 50 (138)
T 1y81_A 9 SNSKEFRKIALVGASKNPAKYGNIILKDLLSKGF---EVLPVNPN 50 (138)
T ss_dssp -----CCEEEEETCCSCTTSHHHHHHHHHHHTTC---EEEEECTT
T ss_pred ccccCCCeEEEEeecCCCCCHHHHHHHHHHHCCC---EEEEeCCC
Confidence 356778999999997 8999999999999884 56765544
|
| >1ys4_A Aspartate-semialdehyde dehydrogenase; oxidoreductase, asadh; HET: NAP; 2.29A {Methanocaldococcus jannaschii} | Back alignment and structure |
|---|
Probab=85.67 E-value=0.65 Score=46.60 Aligned_cols=34 Identities=24% Similarity=0.331 Sum_probs=28.4
Q ss_pred CEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEec
Q 010075 13 KTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRA 48 (519)
Q Consensus 13 k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~ 48 (519)
++|.|.||||.+|+.+++.|+++ |++ +|.++.|+
T Consensus 9 ~kV~IiGAtG~iG~~llr~L~~~-p~~-ev~~i~~s 42 (354)
T 1ys4_A 9 IKVGVLGATGSVGQRFVQLLADH-PMF-ELTALAAS 42 (354)
T ss_dssp EEEEEETTTSHHHHHHHHHHTTC-SSE-EEEEEEEC
T ss_pred ceEEEECcCCHHHHHHHHHHhcC-CCC-EEEEEEcc
Confidence 58999999999999999988864 554 78888764
|
| >3l07_A Bifunctional protein fold; structural genomics, IDP01849, methylenetetrahydrofolate dehydrogenase; 1.88A {Francisella tularensis} | Back alignment and structure |
|---|
Probab=85.53 E-value=1.7 Score=41.96 Aligned_cols=34 Identities=18% Similarity=0.197 Sum_probs=29.1
Q ss_pred cCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEE
Q 010075 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFV 46 (519)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~Lv 46 (519)
++|++++|.|++|.+|+.++..|++.+ .+|++.-
T Consensus 159 l~Gk~vvVIG~s~iVG~p~A~lL~~~g---AtVtv~h 192 (285)
T 3l07_A 159 TEGAYAVVVGASNVVGKPVSQLLLNAK---ATVTTCH 192 (285)
T ss_dssp CTTCEEEEECCCTTTHHHHHHHHHHTT---CEEEEEC
T ss_pred CCCCEEEEECCCchhHHHHHHHHHHCC---CeEEEEe
Confidence 589999999999999999999999987 4565543
|
| >3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A* | Back alignment and structure |
|---|
Probab=85.41 E-value=1.7 Score=43.01 Aligned_cols=37 Identities=22% Similarity=0.158 Sum_probs=29.0
Q ss_pred cCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecC
Q 010075 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAA 49 (519)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~ 49 (519)
-.|.+|+|+|+ |-+|...+..+...+. .+|++..++.
T Consensus 170 ~~g~~vlv~Ga-G~vG~~a~qla~~~g~--~~Vi~~~~~~ 206 (345)
T 3jv7_A 170 GPGSTAVVIGV-GGLGHVGIQILRAVSA--ARVIAVDLDD 206 (345)
T ss_dssp CTTCEEEEECC-SHHHHHHHHHHHHHCC--CEEEEEESCH
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHHcCC--CEEEEEcCCH
Confidence 46889999998 9999988877766632 6888887764
|
| >2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A* | Back alignment and structure |
|---|
Probab=85.33 E-value=0.73 Score=45.71 Aligned_cols=36 Identities=11% Similarity=0.166 Sum_probs=29.6
Q ss_pred CCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecC
Q 010075 11 ENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAA 49 (519)
Q Consensus 11 ~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~ 49 (519)
.|.+|+|+|| |.+|..++..+...|. .+|++..|+.
T Consensus 164 ~g~~VlV~Ga-G~vG~~~~q~a~~~Ga--~~Vi~~~~~~ 199 (343)
T 2dq4_A 164 SGKSVLITGA-GPIGLMAAMVVRASGA--GPILVSDPNP 199 (343)
T ss_dssp TTSCEEEECC-SHHHHHHHHHHHHTTC--CSEEEECSCH
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCC--CEEEEECCCH
Confidence 7899999999 9999999987777663 3788888763
|
| >1h2b_A Alcohol dehydrogenase; oxidoreductase, archaea, hyperthermophIle, zinc; HET: OCA NAJ; 1.62A {Aeropyrum pernix} SCOP: b.35.1.2 c.2.1.1 | Back alignment and structure |
|---|
Probab=85.32 E-value=0.91 Score=45.38 Aligned_cols=36 Identities=8% Similarity=0.148 Sum_probs=29.6
Q ss_pred cCCCEEEEeCCccHHHHHHHHHHHHh-CCCccEEEEEEecC
Q 010075 10 LENKTILVSGVTGFVAKVFIEKILRV-QPNVKKLYLFVRAA 49 (519)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lv~~LL~~-g~~v~~V~~LvR~~ 49 (519)
-.|.+|||+|| |-+|...+..+... | .+|++..++.
T Consensus 185 ~~g~~VlV~Ga-G~vG~~avqlak~~~G---a~Vi~~~~~~ 221 (359)
T 1h2b_A 185 YPGAYVAIVGV-GGLGHIAVQLLKVMTP---ATVIALDVKE 221 (359)
T ss_dssp CTTCEEEEECC-SHHHHHHHHHHHHHCC---CEEEEEESSH
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHHcCC---CeEEEEeCCH
Confidence 46789999999 89999998877776 6 4788888764
|
| >2i6t_A Ubiquitin-conjugating enzyme E2-like isoform A; L-lactate dehydrogenase, oxidoreductase, ubiquitin-protein L unknown function; 2.10A {Homo sapiens} PDB: 3dl2_A | Back alignment and structure |
|---|
Probab=85.29 E-value=9.6 Score=37.06 Aligned_cols=102 Identities=13% Similarity=0.058 Sum_probs=63.1
Q ss_pred CCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEEe
Q 010075 12 NKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVP 91 (519)
Q Consensus 12 ~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v~ 91 (519)
.++|.|.|| |.+|..++..|+..+. +.+|.+..+..........+. . . ...++.. .
T Consensus 14 ~~kV~ViGa-G~vG~~~a~~l~~~g~-~~ev~L~Di~~~~~g~a~dl~----~----------~-------~~~~i~~-t 69 (303)
T 2i6t_A 14 VNKITVVGG-GELGIACTLAISAKGI-ADRLVLLDLSEGTKGATMDLE----I----------F-------NLPNVEI-S 69 (303)
T ss_dssp CCEEEEECC-SHHHHHHHHHHHHHTC-CSEEEEECCC-----CHHHHH----H----------H-------TCTTEEE-E
T ss_pred CCEEEEECC-CHHHHHHHHHHHhcCC-CCEEEEEcCCcchHHHHHHHh----h----------h-------cCCCeEE-e
Confidence 478999996 9999999999998884 457888887653110111111 0 0 0123433 2
Q ss_pred ccCCCCCCCCChhhhHHHHhcCccEEEEcCccCCccccHHHHHHHhHHHHHHHHHHHHhc
Q 010075 92 GDISSEDLGLKDSNLKEELWNELDIMVNSAAITKFDERYDVAFGINTLGVIHLVNFAKKC 151 (519)
Q Consensus 92 gDl~~~~lgls~~~~~~~l~~~vdiViH~Aa~v~f~~~~~~~~~~Nv~gt~~ll~~a~~~ 151 (519)
+|. ..+.+.|+||-.|+...-.......+..|+.-.+.+.+.+.+.
T Consensus 70 ~d~--------------~~l~~aD~Vi~aag~~~pG~tR~dl~~~n~~i~~~i~~~i~~~ 115 (303)
T 2i6t_A 70 KDL--------------SASAHSKVVIFTVNSLGSSQSYLDVVQSNVDMFRALVPALGHY 115 (303)
T ss_dssp SCG--------------GGGTTCSEEEECCCC----CCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCH--------------HHHCCCCEEEEcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHh
Confidence 222 2246899999999874333344556788888888888888775
|
| >1tt5_B Ubiquitin-activating enzyme E1C isoform 1; cell cycle, ligase; 2.60A {Homo sapiens} SCOP: c.111.1.2 PDB: 3dbl_B 3dbr_B 3dbh_B 3gzn_B* 1yov_B 1r4m_B 1r4n_B* | Back alignment and structure |
|---|
Probab=85.25 E-value=2.9 Score=43.08 Aligned_cols=93 Identities=13% Similarity=0.135 Sum_probs=55.0
Q ss_pred cCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHH----HHHhh---hhhHHHHHhhhccccccc
Q 010075 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQ----NEVLA---KDVFNVLKEKWGTRLNSF 82 (519)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~----~~~~~---~~~f~~l~~~~~~~~~~~ 82 (519)
+++.+|+|.|+ |.+|..+++.|.+.| |.+|.++....-..+-..|-. +++-+ ...-+++++..|
T Consensus 38 L~~~~VlvvG~-GGlGs~va~~La~aG--vg~i~ivD~D~Ve~sNL~RQ~l~~~~diG~~Ka~~a~~~l~~lnp------ 108 (434)
T 1tt5_B 38 LDTCKVLVIGA-GGLGCELLKNLALSG--FRQIHVIDMDTIDVSNLNRQFLFRPKDIGRPKAEVAAEFLNDRVP------ 108 (434)
T ss_dssp HHTCCEEEECS-STHHHHHHHHHHHTT--CCCEEEEECCBCCGGGTTTCTTCCGGGTTSBHHHHHHHHHHHHST------
T ss_pred hcCCEEEEECc-CHHHHHHHHHHHHcC--CCEEEEEcCCEechhccCCCcCCChhHcCcHHHHHHHHHHHhhCC------
Confidence 46789999996 669999999999987 578888854331111111100 00000 001133344333
Q ss_pred cCCceEEEeccCCCCCCCCChhhhHHHHhcCccEEEEcC
Q 010075 83 ISEKITFVPGDISSEDLGLKDSNLKEELWNELDIMVNSA 121 (519)
Q Consensus 83 ~~~~v~~v~gDl~~~~lgls~~~~~~~l~~~vdiViH~A 121 (519)
.-+++.+..++.+ .. ..+++++|+||.+.
T Consensus 109 -~v~v~~~~~~i~~-------~~--~~~~~~~DlVi~~~ 137 (434)
T 1tt5_B 109 -NCNVVPHFNKIQD-------FN--DTFYRQFHIIVCGL 137 (434)
T ss_dssp -TCCCEEEESCGGG-------BC--HHHHTTCSEEEECC
T ss_pred -CCEEEEEecccch-------hh--HHHhcCCCEEEECC
Confidence 2457778877763 22 25678899999984
|
| >1ldn_A L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NAD(A)); HET: FBP NAD; 2.50A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1ldb_A 2ldb_A* | Back alignment and structure |
|---|
Probab=84.96 E-value=11 Score=36.73 Aligned_cols=107 Identities=15% Similarity=0.141 Sum_probs=63.3
Q ss_pred CCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEEe
Q 010075 12 NKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVP 91 (519)
Q Consensus 12 ~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v~ 91 (519)
.++|.|+|| |.+|..++..|+..+. +.+|+++.+... ..+....++. + ..+ .....+.+..
T Consensus 6 ~~kI~IIGa-G~vG~sla~~l~~~~~-~~ev~l~Di~~~---~~~~~~~dl~-----~----~~~-----~~~~~~~i~~ 66 (316)
T 1ldn_A 6 GARVVVIGA-GFVGASYVFALMNQGI-ADEIVLIDANES---KAIGDAMDFN-----H----GKV-----FAPKPVDIWH 66 (316)
T ss_dssp SCEEEEECC-SHHHHHHHHHHHHHTC-CSEEEEECSSHH---HHHHHHHHHH-----H----HTT-----SSSSCCEEEE
T ss_pred CCEEEEECc-CHHHHHHHHHHHhCCC-CCEEEEEeCCcc---hHHHHHhhHH-----H----Hhh-----hcCCCeEEEc
Confidence 368999998 9999999999887753 468888887632 1111111111 1 000 0111233332
Q ss_pred ccCCCCCCCCChhhhHHHHhcCccEEEEcCccCCcc-ccHHHHHHHhHHHHHHHHHHHHhc
Q 010075 92 GDISSEDLGLKDSNLKEELWNELDIMVNSAAITKFD-ERYDVAFGINTLGVIHLVNFAKKC 151 (519)
Q Consensus 92 gDl~~~~lgls~~~~~~~l~~~vdiViH~Aa~v~f~-~~~~~~~~~Nv~gt~~ll~~a~~~ 151 (519)
+| . ..+.+.|+||-+|+...-. ......+..|..-.+.+.+.+.+.
T Consensus 67 ~~----------~----~al~~aDvViia~~~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~ 113 (316)
T 1ldn_A 67 GD----------Y----DDCRDADLVVICAGANQKPGETRLDLVDKNIAIFRSIVESVMAS 113 (316)
T ss_dssp CC----------G----GGTTTCSEEEECCSCCCCTTTCSGGGHHHHHHHHHHHHHHHHHH
T ss_pred Cc----------H----HHhCCCCEEEEcCCCCCCCCCCHHHHHHcChHHHHHHHHHHHHH
Confidence 11 1 2356899999999875421 122334667887788888877765
|
| >1lld_A L-lactate dehydrogenase; oxidoreductase(CHOH (D)-NAD (A)); HET: NAD; 2.00A {Bifidobacterium longum subsp} SCOP: c.2.1.5 d.162.1.1 PDB: 1lth_T* | Back alignment and structure |
|---|
Probab=84.92 E-value=10 Score=36.71 Aligned_cols=107 Identities=12% Similarity=0.057 Sum_probs=62.8
Q ss_pred CCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEEe
Q 010075 12 NKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVP 91 (519)
Q Consensus 12 ~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v~ 91 (519)
.++|.|.|| |.+|..++..|.+.+. +.+|.++.|+...... ..+. + ....+ + .....+..
T Consensus 7 ~mkI~IiGa-G~vG~~~a~~l~~~g~-~~~V~l~d~~~~~~~~-~~~~--~---------~~~~~--~----~~~~~v~~ 66 (319)
T 1lld_A 7 PTKLAVIGA-GAVGSTLAFAAAQRGI-AREIVLEDIAKERVEA-EVLD--M---------QHGSS--F----YPTVSIDG 66 (319)
T ss_dssp CCEEEEECC-SHHHHHHHHHHHHTTC-CSEEEEECSSHHHHHH-HHHH--H---------HHTGG--G----STTCEEEE
T ss_pred CCEEEEECC-CHHHHHHHHHHHhCCC-CCEEEEEeCChhHHHH-HHHH--H---------Hhhhh--h----cCCeEEEe
Confidence 368999997 9999999999998873 2378888886311110 0010 0 00000 0 01111111
Q ss_pred ccCCCCCCCCChhhhHHHHhcCccEEEEcCccCCc-cccHHHHHHHhHHHHHHHHHHHHhc
Q 010075 92 GDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF-DERYDVAFGINTLGVIHLVNFAKKC 151 (519)
Q Consensus 92 gDl~~~~lgls~~~~~~~l~~~vdiViH~Aa~v~f-~~~~~~~~~~Nv~gt~~ll~~a~~~ 151 (519)
. + +. ..+.+.|+||-+++.... ..........|....+.+++...+.
T Consensus 67 ~--~---------~~--~~~~~aD~Vii~v~~~~~~g~~r~~~~~~n~~~~~~~~~~i~~~ 114 (319)
T 1lld_A 67 S--D---------DP--EICRDADMVVITAGPRQKPGQSRLELVGATVNILKAIMPNLVKV 114 (319)
T ss_dssp E--S---------CG--GGGTTCSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred C--C---------CH--HHhCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHh
Confidence 1 0 11 234679999999876432 2445566778888888888877765
|
| >2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A* | Back alignment and structure |
|---|
Probab=84.90 E-value=2.5 Score=42.29 Aligned_cols=38 Identities=16% Similarity=0.024 Sum_probs=29.8
Q ss_pred CCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCc
Q 010075 11 ENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADI 51 (519)
Q Consensus 11 ~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~ 51 (519)
.|.+|||+|+ |.+|...+..+...|. .+|++..++...
T Consensus 190 ~g~~VlV~Ga-G~vG~~avqla~~~Ga--~~Vi~~~~~~~~ 227 (373)
T 2fzw_A 190 PGSVCAVFGL-GGVGLAVIMGCKVAGA--SRIIGVDINKDK 227 (373)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHHTC--SEEEEECSCGGG
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCC--CeEEEEcCCHHH
Confidence 5789999996 9999999887777663 378888776543
|
| >3o8q_A Shikimate 5-dehydrogenase I alpha; structural genomics, center for structural genomics of infec diseases, csgid; HET: EPE; 1.45A {Vibrio cholerae biovar el tor} PDB: 3sef_A* 3pgj_A* 3o8q_B* | Back alignment and structure |
|---|
Probab=84.88 E-value=1 Score=43.55 Aligned_cols=37 Identities=30% Similarity=0.411 Sum_probs=31.7
Q ss_pred cCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecC
Q 010075 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAA 49 (519)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~ 49 (519)
+++++++|+|+ |.+|+.++..|.+.|. .+|++..|+.
T Consensus 124 l~~k~vlvlGa-Gg~g~aia~~L~~~G~--~~v~v~~R~~ 160 (281)
T 3o8q_A 124 LKGATILLIGA-GGAARGVLKPLLDQQP--ASITVTNRTF 160 (281)
T ss_dssp CTTCEEEEECC-SHHHHHHHHHHHTTCC--SEEEEEESSH
T ss_pred ccCCEEEEECc-hHHHHHHHHHHHhcCC--CeEEEEECCH
Confidence 47899999997 7899999999999773 5889998874
|
| >3hsk_A Aspartate-semialdehyde dehydrogenase; candida albicans NADP complex, amino-acid biosynthesis; HET: NAP; 2.20A {Candida albicans} | Back alignment and structure |
|---|
Probab=84.82 E-value=0.92 Score=45.93 Aligned_cols=34 Identities=26% Similarity=0.379 Sum_probs=26.4
Q ss_pred cCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEE
Q 010075 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLF 45 (519)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~L 45 (519)
|+..+|.|.||||++|..|++.|.+ .|.+ +|..+
T Consensus 17 M~~~kVaIvGAtG~vG~ell~lL~~-hp~~-el~~l 50 (381)
T 3hsk_A 17 MSVKKAGVLGATGSVGQRFILLLSK-HPEF-EIHAL 50 (381)
T ss_dssp -CCEEEEEETTTSHHHHHHHHHHTT-CSSE-EEEEE
T ss_pred CCccEEEEECCCChHHHHHHHHHHc-CCCc-eEEEe
Confidence 4557899999999999999996665 5665 66555
|
| >4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus} | Back alignment and structure |
|---|
Probab=84.79 E-value=2.5 Score=43.88 Aligned_cols=71 Identities=17% Similarity=0.290 Sum_probs=48.4
Q ss_pred CCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEEe
Q 010075 12 NKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVP 91 (519)
Q Consensus 12 ~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v~ 91 (519)
.|+|+|.|+ |-+|+.|++.|.+.+ +.|.++.+.+ ...+++. ++ -.+..+.
T Consensus 3 ~M~iiI~G~-G~vG~~la~~L~~~~---~~v~vId~d~---~~~~~~~-------------~~----------~~~~~i~ 52 (461)
T 4g65_A 3 AMKIIILGA-GQVGGTLAENLVGEN---NDITIVDKDG---DRLRELQ-------------DK----------YDLRVVN 52 (461)
T ss_dssp CEEEEEECC-SHHHHHHHHHTCSTT---EEEEEEESCH---HHHHHHH-------------HH----------SSCEEEE
T ss_pred cCEEEEECC-CHHHHHHHHHHHHCC---CCEEEEECCH---HHHHHHH-------------Hh----------cCcEEEE
Confidence 578999995 899999999999888 5667776542 1222222 11 2467899
Q ss_pred ccCCCCCCCCChhhhHH-HHhcCccEEEE
Q 010075 92 GDISSEDLGLKDSNLKE-ELWNELDIMVN 119 (519)
Q Consensus 92 gDl~~~~lgls~~~~~~-~l~~~vdiViH 119 (519)
||-++ .+.++ .-.++.|++|-
T Consensus 53 Gd~~~-------~~~L~~Agi~~ad~~ia 74 (461)
T 4g65_A 53 GHASH-------PDVLHEAGAQDADMLVA 74 (461)
T ss_dssp SCTTC-------HHHHHHHTTTTCSEEEE
T ss_pred EcCCC-------HHHHHhcCCCcCCEEEE
Confidence 99995 33332 33568999883
|
| >4gsl_A Ubiquitin-like modifier-activating enzyme ATG7; ubiquitin-like protein activation enzyme, ubiquitin-like Pro transfer enzyme, protein transport; 2.70A {Saccharomyces cerevisiae} PDB: 3vh2_A 4gsk_A 3vh1_A | Back alignment and structure |
|---|
Probab=84.61 E-value=4.1 Score=43.60 Aligned_cols=105 Identities=17% Similarity=0.105 Sum_probs=59.4
Q ss_pred hcCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHH----HHHhh---hhhHHHHHhhhcccccc
Q 010075 9 FLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQ----NEVLA---KDVFNVLKEKWGTRLNS 81 (519)
Q Consensus 9 ~~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~----~~~~~---~~~f~~l~~~~~~~~~~ 81 (519)
-+++++|+|.|+ |.+|..+++.|.+.| |++|.++.+..-..+-..|-. +++-. ...-+++++-.|
T Consensus 323 kL~~arVLIVGa-GGLGs~vA~~La~aG--VG~ItLvD~D~Ve~SNL~RQ~L~~~~dIG~~KAeaaa~~L~~iNP----- 394 (615)
T 4gsl_A 323 IIKNTKVLLLGA-GTLGCYVSRALIAWG--VRKITFVDNGTVSYSNPVRQALYNFEDCGKPKAELAAASLKRIFP----- 394 (615)
T ss_dssp HHHTCEEEEECC-SHHHHHHHHHHHHTT--CCEEEEECCCBCCTTGGGTSTTCCGGGTTSBHHHHHHHHHHHHCT-----
T ss_pred HHhCCeEEEECC-CHHHHHHHHHHHHcC--CCEEEEEcCCCCcccCcccccCCChhhcChHHHHHHHHHHHhhCC-----
Confidence 467899999995 779999999999976 689988877542211111100 00000 001133444443
Q ss_pred ccCCceEEEeccCCCCCCCCCh-------hhhHHHHhcCccEEEEcCcc
Q 010075 82 FISEKITFVPGDISSEDLGLKD-------SNLKEELWNELDIMVNSAAI 123 (519)
Q Consensus 82 ~~~~~v~~v~gDl~~~~lgls~-------~~~~~~l~~~vdiViH~Aa~ 123 (519)
.-+++.+..++.-++.-+++ .+....++++.|+||.|...
T Consensus 395 --~V~v~~~~~~Ipm~gh~v~~e~~~~l~~~~l~~ll~~~DlVvd~tDn 441 (615)
T 4gsl_A 395 --LMDATGVKLSIPMIGHKLVNEEAQHKDFDRLRALIKEHDIIFLLVDS 441 (615)
T ss_dssp --TCEEEEECCCCCCTTCCCSCHHHHHHHHHHHHHHHHHCSEEEECCSS
T ss_pred --CcEEEEeeccccccCccccchhhhcCCHHHHHHHhhcCCEEEecCCC
Confidence 24566666666433222211 12234567789999998654
|
| >1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1 | Back alignment and structure |
|---|
Probab=84.50 E-value=1 Score=45.38 Aligned_cols=37 Identities=11% Similarity=0.223 Sum_probs=29.4
Q ss_pred cCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecC
Q 010075 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAA 49 (519)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~ 49 (519)
-.|.+|||+| +|.+|...+..+...| ..+|+++.|+.
T Consensus 194 ~~g~~VlV~G-aG~vG~~aiqlak~~G--a~~Vi~~~~~~ 230 (380)
T 1vj0_A 194 FAGKTVVIQG-AGPLGLFGVVIARSLG--AENVIVIAGSP 230 (380)
T ss_dssp CBTCEEEEEC-CSHHHHHHHHHHHHTT--BSEEEEEESCH
T ss_pred CCCCEEEEEC-cCHHHHHHHHHHHHcC--CceEEEEcCCH
Confidence 3578999999 8999999888776665 24889988764
|
| >1p9l_A Dihydrodipicolinate reductase; oxidoreductase, lysine biosynthesis, NADH binding specificity, TB structural genomics consortium; HET: NAD PDC PG4; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.3 d.81.1.3 PDB: 1c3v_A* 1yl5_A 1yl7_A* 1yl6_A* | Back alignment and structure |
|---|
Probab=84.31 E-value=2.1 Score=40.44 Aligned_cols=34 Identities=18% Similarity=0.188 Sum_probs=26.2
Q ss_pred CEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEec
Q 010075 13 KTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRA 48 (519)
Q Consensus 13 k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~ 48 (519)
++|.|.|++|-+|+.+++.+.+. ++ .++.+.+..
T Consensus 1 mkV~V~Ga~G~mG~~i~~~~~~~-~~-~elva~~d~ 34 (245)
T 1p9l_A 1 MRVGVLGAKGKVGTTMVRAVAAA-DD-LTLSAELDA 34 (245)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHC-TT-CEEEEEECT
T ss_pred CEEEEECCCCHHHHHHHHHHHhC-CC-CEEEEEEcc
Confidence 47999999999999999988764 34 466655554
|
| >4a5o_A Bifunctional protein fold; oxidoreductase, hydrolase; 2.20A {Pseudomonas aeruginosa PAO1} | Back alignment and structure |
|---|
Probab=84.28 E-value=1.9 Score=41.73 Aligned_cols=34 Identities=15% Similarity=0.124 Sum_probs=29.2
Q ss_pred cCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEE
Q 010075 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFV 46 (519)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~Lv 46 (519)
++||+++|.|++|.+|+.++..|++.+ .+|++.-
T Consensus 159 l~Gk~vvVvGrs~iVG~plA~lL~~~g---AtVtv~h 192 (286)
T 4a5o_A 159 LYGMDAVVVGASNIVGRPMALELLLGG---CTVTVTH 192 (286)
T ss_dssp CTTCEEEEECTTSTTHHHHHHHHHHTT---CEEEEEC
T ss_pred CCCCEEEEECCCchhHHHHHHHHHHCC---CeEEEEe
Confidence 479999999999999999999999987 4566553
|
| >3pwz_A Shikimate dehydrogenase 3; alpha-beta, oxidoreductase; 1.71A {Pseudomonas putida} | Back alignment and structure |
|---|
Probab=84.28 E-value=1.1 Score=43.11 Aligned_cols=37 Identities=24% Similarity=0.377 Sum_probs=31.6
Q ss_pred cCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecC
Q 010075 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAA 49 (519)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~ 49 (519)
+++++++|+|+ |.+|+.++..|.+.|. .+|++..|+.
T Consensus 118 l~~k~~lvlGa-Gg~~~aia~~L~~~G~--~~v~i~~R~~ 154 (272)
T 3pwz_A 118 LRNRRVLLLGA-GGAVRGALLPFLQAGP--SELVIANRDM 154 (272)
T ss_dssp CTTSEEEEECC-SHHHHHHHHHHHHTCC--SEEEEECSCH
T ss_pred ccCCEEEEECc-cHHHHHHHHHHHHcCC--CEEEEEeCCH
Confidence 46899999996 7899999999999773 5888888874
|
| >3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana} | Back alignment and structure |
|---|
Probab=84.23 E-value=1.7 Score=43.60 Aligned_cols=38 Identities=11% Similarity=0.098 Sum_probs=30.3
Q ss_pred CCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCc
Q 010075 11 ENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADI 51 (519)
Q Consensus 11 ~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~ 51 (519)
.|.+|+|+|| |-+|...+..+...|. .+|++..++...
T Consensus 193 ~g~~VlV~Ga-G~vG~~a~q~a~~~Ga--~~Vi~~~~~~~~ 230 (378)
T 3uko_A 193 PGSNVAIFGL-GTVGLAVAEGAKTAGA--SRIIGIDIDSKK 230 (378)
T ss_dssp TTCCEEEECC-SHHHHHHHHHHHHHTC--SCEEEECSCTTH
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCC--CeEEEEcCCHHH
Confidence 5789999998 8999998887777773 478888777643
|
| >3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae} | Back alignment and structure |
|---|
Probab=84.18 E-value=3.3 Score=42.81 Aligned_cols=86 Identities=20% Similarity=0.179 Sum_probs=55.4
Q ss_pred cCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcc-cHHHHHHHHHhhhhhHHHHHhhhccccccccCCceE
Q 010075 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADID-SAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKIT 88 (519)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~-~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~ 88 (519)
+++|+|+|.|. |-.|..+++.|.+.| .+|.+..+..... ...++|+ ...+.
T Consensus 7 ~~~k~v~viG~-G~sG~s~A~~l~~~G---~~V~~~D~~~~~~~~~~~~L~------------------------~~gi~ 58 (451)
T 3lk7_A 7 FENKKVLVLGL-ARSGEAAARLLAKLG---AIVTVNDGKPFDENPTAQSLL------------------------EEGIK 58 (451)
T ss_dssp TTTCEEEEECC-TTTHHHHHHHHHHTT---CEEEEEESSCGGGCHHHHHHH------------------------HTTCE
T ss_pred cCCCEEEEEee-CHHHHHHHHHHHhCC---CEEEEEeCCcccCChHHHHHH------------------------hCCCE
Confidence 57999999997 779999999999999 6778877654221 1222332 13566
Q ss_pred EEeccCCCCCCCCChhhhHHHHhcC-ccEEEEcCccCCccccHHHHHH
Q 010075 89 FVPGDISSEDLGLKDSNLKEELWNE-LDIMVNSAAITKFDERYDVAFG 135 (519)
Q Consensus 89 ~v~gDl~~~~lgls~~~~~~~l~~~-vdiViH~Aa~v~f~~~~~~~~~ 135 (519)
+..|.-. + .+.++ +|.||.+.|...-+..+..+.+
T Consensus 59 ~~~g~~~-------~-----~~~~~~~d~vv~spgi~~~~p~~~~a~~ 94 (451)
T 3lk7_A 59 VVCGSHP-------L-----ELLDEDFCYMIKNPGIPYNNPMVKKALE 94 (451)
T ss_dssp EEESCCC-------G-----GGGGSCEEEEEECTTSCTTSHHHHHHHH
T ss_pred EEECCCh-------H-----HhhcCCCCEEEECCcCCCCChhHHHHHH
Confidence 6665432 1 23345 8999999887544443444444
|
| >1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1 | Back alignment and structure |
|---|
Probab=84.13 E-value=2.4 Score=42.39 Aligned_cols=37 Identities=8% Similarity=-0.031 Sum_probs=28.5
Q ss_pred cCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecC
Q 010075 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAA 49 (519)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~ 49 (519)
-.|.+|||+|+ |-+|...+..+...|. .+|+++.++.
T Consensus 189 ~~g~~VlV~Ga-G~vG~~a~qlak~~Ga--~~Vi~~~~~~ 225 (371)
T 1f8f_A 189 TPASSFVTWGA-GAVGLSALLAAKVCGA--SIIIAVDIVE 225 (371)
T ss_dssp CTTCEEEEESC-SHHHHHHHHHHHHHTC--SEEEEEESCH
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHHcCC--CeEEEECCCH
Confidence 35789999995 9999988887766663 3688887753
|
| >2d4a_B Malate dehydrogenase; archaea, hyperthermophIle, oxidoreductase; 2.87A {Aeropyrum pernix} | Back alignment and structure |
|---|
Probab=84.07 E-value=11 Score=36.80 Aligned_cols=104 Identities=15% Similarity=0.087 Sum_probs=63.4
Q ss_pred EEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEEe-c
Q 010075 14 TILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVP-G 92 (519)
Q Consensus 14 ~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v~-g 92 (519)
+|.|+|| |.+|..++..|+..+. .+|.++.+....... ...++.+...+ . ...+.+.. +
T Consensus 1 KI~IiGa-G~vG~~~a~~l~~~~l--~el~L~Di~~~~~~g---~~~dl~~~~~~------~--------~~~~~i~~t~ 60 (308)
T 2d4a_B 1 MITILGA-GKVGMATAVMLMMRGY--DDLLLIARTPGKPQG---EALDLAHAAAE------L--------GVDIRISGSN 60 (308)
T ss_dssp CEEEECC-SHHHHHHHHHHHHHTC--SCEEEECSSTTHHHH---HHHHHHHHHHH------H--------TCCCCEEEES
T ss_pred CEEEECc-CHHHHHHHHHHHhCCC--CEEEEEcCChhhHHH---HHHHHHHhhhh------c--------CCCeEEEECC
Confidence 4889998 9999999998887653 468888876532211 11111111000 0 01111221 2
Q ss_pred cCCCCCCCCChhhhHHHHhcCccEEEEcCccCC-ccccHHHHHHHhHHHHHHHHHHHHhc
Q 010075 93 DISSEDLGLKDSNLKEELWNELDIMVNSAAITK-FDERYDVAFGINTLGVIHLVNFAKKC 151 (519)
Q Consensus 93 Dl~~~~lgls~~~~~~~l~~~vdiViH~Aa~v~-f~~~~~~~~~~Nv~gt~~ll~~a~~~ 151 (519)
| . ..+.+.|+||-.|+... ...........|+.-.+.+.+.+.+.
T Consensus 61 d------------~--~a~~~aD~Vi~~ag~~~k~G~~r~dl~~~n~~i~~~i~~~i~~~ 106 (308)
T 2d4a_B 61 S------------Y--EDMRGSDIVLVTAGIGRKPGMTREQLLEANANTMADLAEKIKAY 106 (308)
T ss_dssp C------------G--GGGTTCSEEEECCSCCCCSSCCTHHHHHHHHHHHHHHHHHHHHH
T ss_pred C------------H--HHhCCCCEEEEeCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHH
Confidence 2 1 23578999999988754 23344556788999999998888775
|
| >2yv3_A Aspartate-semialdehyde dehydrogenase; aspartate pathway, structural genomics; 2.70A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=84.01 E-value=0.76 Score=45.67 Aligned_cols=33 Identities=21% Similarity=0.325 Sum_probs=27.0
Q ss_pred CEEEEeCCccHHHHHHHHHHHHhCCCccEEEEE
Q 010075 13 KTILVSGVTGFVAKVFIEKILRVQPNVKKLYLF 45 (519)
Q Consensus 13 k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~L 45 (519)
++|.|-||||.+|+.|++.|+++++++..++.+
T Consensus 1 mkVaI~GAtG~iG~~llr~L~~~~~~~~~l~~~ 33 (331)
T 2yv3_A 1 MRVAVVGATGAVGREILKVLEARNFPLSELRLY 33 (331)
T ss_dssp CCEEEETTTSHHHHHHHHHHHHTTCCCSCCEEE
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCCcEEEEEe
Confidence 469999999999999999998766666666654
|
| >1tt7_A YHFP; alcohol dehydrogenase, Zn-dependent, NAD, structural genomics, protein structure initiative, PSI; 2.70A {Bacillus subtilis} SCOP: b.35.1.2 c.2.1.1 PDB: 1y9e_A* | Back alignment and structure |
|---|
Probab=83.41 E-value=1.1 Score=44.18 Aligned_cols=37 Identities=19% Similarity=0.257 Sum_probs=30.6
Q ss_pred CC-EEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCc
Q 010075 12 NK-TILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADI 51 (519)
Q Consensus 12 ~k-~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~ 51 (519)
|. +|+|+||+|.+|...+..+...| .+|++..++...
T Consensus 150 g~~~VlV~Ga~G~vG~~~~q~a~~~G---a~vi~~~~~~~~ 187 (330)
T 1tt7_A 150 EKGSVLVTGATGGVGGIAVSMLNKRG---YDVVASTGNREA 187 (330)
T ss_dssp GGCCEEEESTTSHHHHHHHHHHHHHT---CCEEEEESSSST
T ss_pred CCceEEEECCCCHHHHHHHHHHHHCC---CEEEEEeCCHHH
Confidence 44 89999999999999998887777 468888887543
|
| >2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida} | Back alignment and structure |
|---|
Probab=83.35 E-value=2.5 Score=42.75 Aligned_cols=37 Identities=8% Similarity=0.055 Sum_probs=29.4
Q ss_pred cCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecC
Q 010075 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAA 49 (519)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~ 49 (519)
-.|.+|||+|+ |.+|...+..+...|. .+|++..+++
T Consensus 184 ~~g~~VlV~Ga-G~vG~~aiqlak~~Ga--~~Vi~~~~~~ 220 (398)
T 2dph_A 184 KPGSHVYIAGA-GPVGRCAAAGARLLGA--ACVIVGDQNP 220 (398)
T ss_dssp CTTCEEEEECC-SHHHHHHHHHHHHHTC--SEEEEEESCH
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHHcCC--CEEEEEcCCH
Confidence 36889999997 9999988877766662 4889988764
|
| >4a26_A Putative C-1-tetrahydrofolate synthase, cytoplasm; oxidoreductase, hydrolase, leishmaniasis; 2.70A {Leishmania major} | Back alignment and structure |
|---|
Probab=83.16 E-value=2.3 Score=41.35 Aligned_cols=35 Identities=11% Similarity=0.214 Sum_probs=30.2
Q ss_pred cCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEe
Q 010075 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVR 47 (519)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR 47 (519)
++|++++|.|++|.+|+.++..|++.+ .+|++.-|
T Consensus 163 l~Gk~vvVIG~s~iVG~p~A~lL~~~g---AtVtv~~~ 197 (300)
T 4a26_A 163 MAGKRAVVLGRSNIVGAPVAALLMKEN---ATVTIVHS 197 (300)
T ss_dssp CTTCEEEEECCCTTTHHHHHHHHHHTT---CEEEEECT
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCC---CeEEEEeC
Confidence 589999999999999999999999987 46666654
|
| >1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A* | Back alignment and structure |
|---|
Probab=83.07 E-value=2.9 Score=41.89 Aligned_cols=37 Identities=16% Similarity=0.091 Sum_probs=28.9
Q ss_pred CCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCC
Q 010075 11 ENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAAD 50 (519)
Q Consensus 11 ~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~ 50 (519)
.|.+|+|+|+ |-+|...+..+...|. .+|++..++..
T Consensus 195 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga--~~Vi~~~~~~~ 231 (376)
T 1e3i_A 195 PGSTCAVFGL-GCVGLSAIIGCKIAGA--SRIIAIDINGE 231 (376)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHTTC--SEEEEECSCGG
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCC--CeEEEEcCCHH
Confidence 5789999996 9999998877766662 47888877654
|
| >2duw_A Putative COA-binding protein; ligand binding protein; NMR {Klebsiella pneumoniae} | Back alignment and structure |
|---|
Probab=82.93 E-value=1.1 Score=38.79 Aligned_cols=46 Identities=13% Similarity=0.150 Sum_probs=37.2
Q ss_pred CCCcchhhhcC-CCEEEEeCCc---cHHHHHHHHHHHHhCCCccEEEEEEecC
Q 010075 1 MELGSVVEFLE-NKTILVSGVT---GFVAKVFIEKILRVQPNVKKLYLFVRAA 49 (519)
Q Consensus 1 ~~~~~i~~~~~-~k~VlITGaT---GFlG~~Lv~~LL~~g~~v~~V~~LvR~~ 49 (519)
|+...+..++. .++|.|.|+| |-+|..+++.|++.|. +||...+.+
T Consensus 1 m~~~~l~~ll~~p~~IavIGas~~~g~~G~~~~~~L~~~G~---~v~~vnp~~ 50 (145)
T 2duw_A 1 MKENDIAGILTSTRTIALVGASDKPDRPSYRVMKYLLDQGY---HVIPVSPKV 50 (145)
T ss_dssp CCCCSHHHHHHHCCCEEEESCCSCTTSHHHHHHHHHHHHTC---CEEEECSSS
T ss_pred CCHHHHHHHHhCCCEEEEECcCCCCCChHHHHHHHHHHCCC---EEEEeCCcc
Confidence 55567888886 8999999998 8899999999999985 467655543
|
| >3ijp_A DHPR, dihydrodipicolinate reductase; ssgcid, SBRI, decode biostructures, niaid, amino-acid biosynthesis, cytoplasm; HET: NAP; 2.30A {Bartonella henselae} | Back alignment and structure |
|---|
Probab=82.91 E-value=3.3 Score=40.13 Aligned_cols=35 Identities=26% Similarity=0.399 Sum_probs=27.0
Q ss_pred CEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEec
Q 010075 13 KTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRA 48 (519)
Q Consensus 13 k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~ 48 (519)
.+|.|.||+|-+|+.+++.+.+ .+++.=|-++.|+
T Consensus 22 irV~V~Ga~GrMGr~i~~~v~~-~~~~eLvg~vd~~ 56 (288)
T 3ijp_A 22 MRLTVVGANGRMGRELITAIQR-RKDVELCAVLVRK 56 (288)
T ss_dssp EEEEESSTTSHHHHHHHHHHHT-CSSEEEEEEBCCT
T ss_pred eEEEEECCCCHHHHHHHHHHHh-CCCCEEEEEEecC
Confidence 5899999999999999998886 4665434444554
|
| >1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A* | Back alignment and structure |
|---|
Probab=82.83 E-value=2.9 Score=41.80 Aligned_cols=37 Identities=19% Similarity=0.048 Sum_probs=29.0
Q ss_pred CCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCC
Q 010075 11 ENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAAD 50 (519)
Q Consensus 11 ~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~ 50 (519)
.|.+|+|+|+ |.+|...+..+...|. .+|++..++..
T Consensus 191 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga--~~Vi~~~~~~~ 227 (373)
T 1p0f_A 191 PGSTCAVFGL-GGVGFSAIVGCKAAGA--SRIIGVGTHKD 227 (373)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHHTC--SEEEEECSCGG
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCC--CeEEEECCCHH
Confidence 5789999996 9999998887776663 37888877653
|
| >1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1 | Back alignment and structure |
|---|
Probab=82.83 E-value=2.8 Score=41.88 Aligned_cols=38 Identities=18% Similarity=0.116 Sum_probs=29.4
Q ss_pred cCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCC
Q 010075 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAAD 50 (519)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~ 50 (519)
-.|.+|||+|+ |-+|...+..+...|. .+|++..++..
T Consensus 191 ~~g~~VlV~Ga-G~vG~~a~qla~~~Ga--~~Vi~~~~~~~ 228 (374)
T 1cdo_A 191 EPGSTCAVFGL-GAVGLAAVMGCHSAGA--KRIIAVDLNPD 228 (374)
T ss_dssp CTTCEEEEECC-SHHHHHHHHHHHHTTC--SEEEEECSCGG
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHHcCC--CEEEEEcCCHH
Confidence 35789999996 9999998887776662 37888877654
|
| >2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ... | Back alignment and structure |
|---|
Probab=82.63 E-value=2.9 Score=41.80 Aligned_cols=37 Identities=19% Similarity=0.083 Sum_probs=29.0
Q ss_pred CCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCC
Q 010075 11 ENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAAD 50 (519)
Q Consensus 11 ~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~ 50 (519)
.|.+|+|+|+ |.+|...+..+...|. .+|++..++..
T Consensus 191 ~g~~VlV~Ga-G~vG~~a~qla~~~Ga--~~Vi~~~~~~~ 227 (374)
T 2jhf_A 191 QGSTCAVFGL-GGVGLSVIMGCKAAGA--ARIIGVDINKD 227 (374)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHTTC--SEEEEECSCGG
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCC--CeEEEEcCCHH
Confidence 5789999995 9999998887776662 37888877654
|
| >3ngx_A Bifunctional protein fold; methylenetetrahydrofolate dehydrogenase/cyclohydrolase; 2.30A {Thermoplasma acidophilum} PDB: 3ngl_A | Back alignment and structure |
|---|
Probab=82.51 E-value=2 Score=41.33 Aligned_cols=35 Identities=9% Similarity=0.107 Sum_probs=30.0
Q ss_pred cCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEe
Q 010075 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVR 47 (519)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR 47 (519)
..|++++|.|++|.+|+.++..|++.+ .+|++.-|
T Consensus 148 l~Gk~vvVvG~s~iVG~plA~lL~~~g---AtVtv~~~ 182 (276)
T 3ngx_A 148 YHENTVTIVNRSPVVGRPLSMMLLNRN---YTVSVCHS 182 (276)
T ss_dssp CCSCEEEEECCCTTTHHHHHHHHHHTT---CEEEEECT
T ss_pred cCCCEEEEEcCChHHHHHHHHHHHHCC---CeEEEEeC
Confidence 689999999999999999999999987 45665543
|
| >1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A | Back alignment and structure |
|---|
Probab=82.20 E-value=2.8 Score=41.60 Aligned_cols=37 Identities=16% Similarity=0.146 Sum_probs=28.7
Q ss_pred cCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecC
Q 010075 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAA 49 (519)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~ 49 (519)
-.|.+|||+|+ |.+|...+..+...|. .+|++..++.
T Consensus 170 ~~g~~VlV~Ga-G~vG~~aiqlak~~Ga--~~Vi~~~~~~ 206 (356)
T 1pl8_A 170 TLGHKVLVCGA-GPIGMVTLLVAKAMGA--AQVVVTDLSA 206 (356)
T ss_dssp CTTCEEEEECC-SHHHHHHHHHHHHTTC--SEEEEEESCH
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHHcCC--CEEEEECCCH
Confidence 36899999996 8999998876666662 4788887763
|
| >1hyh_A L-hicdh, L-2-hydroxyisocaproate dehydrogenase; L-2-hydroxycarboxylate dehydrogenase, L-lactate dehydrogenas oxidoreductase (CHOH(D)-NAD+(A)); HET: NAD; 2.20A {Weissella confusa} SCOP: c.2.1.5 d.162.1.1 | Back alignment and structure |
|---|
Probab=82.20 E-value=11 Score=36.65 Aligned_cols=106 Identities=10% Similarity=0.043 Sum_probs=60.0
Q ss_pred CEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEEec
Q 010075 13 KTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVPG 92 (519)
Q Consensus 13 k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v~g 92 (519)
++|.|.| +|.+|..++..|++.+. ..+|++..|+.. ..+.+..++. ... ......+.....
T Consensus 2 ~kI~VIG-aG~~G~~la~~L~~~g~-~~~V~l~d~~~~---~~~~~~~~l~---------~~~-----~~~~~~~~~~~~ 62 (309)
T 1hyh_A 2 RKIGIIG-LGNVGAAVAHGLIAQGV-ADDYVFIDANEA---KVKADQIDFQ---------DAM-----ANLEAHGNIVIN 62 (309)
T ss_dssp CEEEEEC-CSHHHHHHHHHHHHHTC-CSEEEEECSSHH---HHHHHHHHHH---------HHG-----GGSSSCCEEEES
T ss_pred CEEEEEC-CCHHHHHHHHHHHhCCC-CCEEEEEcCCHH---HHHHHHHHHH---------hhh-----hhcCCCeEEEeC
Confidence 5899999 79999999999999873 357888888632 1222221110 000 000122232222
Q ss_pred cCCCCCCCCChhhhHHHHhcCccEEEEcCccCC-----ccccHHHHHHHhHHHHHHHHHHHHhc
Q 010075 93 DISSEDLGLKDSNLKEELWNELDIMVNSAAITK-----FDERYDVAFGINTLGVIHLVNFAKKC 151 (519)
Q Consensus 93 Dl~~~~lgls~~~~~~~l~~~vdiViH~Aa~v~-----f~~~~~~~~~~Nv~gt~~ll~~a~~~ 151 (519)
|. ..+++.|+||-+++... ....-......|+...+.+++.+.+.
T Consensus 63 d~--------------~~~~~aDvViiav~~~~~~~~~~g~~r~~l~~~n~~i~~~i~~~i~~~ 112 (309)
T 1hyh_A 63 DW--------------AALADADVVISTLGNIKLQQDNPTGDRFAELKFTSSMVQSVGTNLKES 112 (309)
T ss_dssp CG--------------GGGTTCSEEEECCSCGGGTC-------CTTHHHHHHHHHHHHHHHHHT
T ss_pred CH--------------HHhCCCCEEEEecCCcccCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 21 22467999999987633 11111233566777777888777664
|
| >3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A | Back alignment and structure |
|---|
Probab=81.90 E-value=1.7 Score=43.07 Aligned_cols=37 Identities=14% Similarity=0.170 Sum_probs=27.9
Q ss_pred cCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecC
Q 010075 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAA 49 (519)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~ 49 (519)
-.|.+|+|+|+ |.+|...+..+...|. .+|++..++.
T Consensus 165 ~~g~~VlV~Ga-G~vG~~a~qla~~~Ga--~~Vi~~~~~~ 201 (352)
T 3fpc_A 165 KLGDTVCVIGI-GPVGLMSVAGANHLGA--GRIFAVGSRK 201 (352)
T ss_dssp CTTCCEEEECC-SHHHHHHHHHHHTTTC--SSEEEECCCH
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHHcCC--cEEEEECCCH
Confidence 35889999995 9999988877766663 3678776653
|
| >1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A* | Back alignment and structure |
|---|
Probab=81.87 E-value=4.4 Score=40.85 Aligned_cols=37 Identities=22% Similarity=0.167 Sum_probs=30.8
Q ss_pred cCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCC
Q 010075 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAAD 50 (519)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~ 50 (519)
+.+++|+|+|+ |-+|...++.+...| .+|++..|+..
T Consensus 170 l~g~~V~ViGa-G~iG~~aa~~a~~~G---a~V~~~d~~~~ 206 (384)
T 1l7d_A 170 VPPARVLVFGV-GVAGLQAIATAKRLG---AVVMATDVRAA 206 (384)
T ss_dssp ECCCEEEEECC-SHHHHHHHHHHHHTT---CEEEEECSCST
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHHCC---CEEEEEeCCHH
Confidence 46899999995 999999999998877 46888887654
|
| >3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A* | Back alignment and structure |
|---|
Probab=81.84 E-value=1.9 Score=41.38 Aligned_cols=36 Identities=17% Similarity=0.195 Sum_probs=32.0
Q ss_pred CCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCc
Q 010075 12 NKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADI 51 (519)
Q Consensus 12 ~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~ 51 (519)
+++|+|.|+ |..|+.++..|++.| .+|++..|+...
T Consensus 118 ~k~vlvlGa-GGaaraia~~L~~~G---~~v~V~nRt~~k 153 (269)
T 3phh_A 118 YQNALILGA-GGSAKALACELKKQG---LQVSVLNRSSRG 153 (269)
T ss_dssp CCEEEEECC-SHHHHHHHHHHHHTT---CEEEEECSSCTT
T ss_pred CCEEEEECC-CHHHHHHHHHHHHCC---CEEEEEeCCHHH
Confidence 899999995 999999999999988 688999998654
|
| >2ewd_A Lactate dehydrogenase,; protein-substrate_cofactor analog complex, oxidoreductase; HET: A3D; 2.00A {Cryptosporidium parvum} PDB: 2frm_A 2fn7_A* 2fnz_A* 2fm3_A | Back alignment and structure |
|---|
Probab=81.48 E-value=4.6 Score=39.49 Aligned_cols=107 Identities=16% Similarity=0.090 Sum_probs=60.9
Q ss_pred CCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEEe
Q 010075 12 NKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVP 91 (519)
Q Consensus 12 ~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v~ 91 (519)
.++|.|.|| |.+|..++..|++.+. .+|++..++.... +....++... . .... ...++...
T Consensus 4 ~~kI~VIGa-G~~G~~ia~~la~~g~--~~V~l~D~~~~~~---~~~~~~l~~~-----~-~~~~------~~~~i~~t- 64 (317)
T 2ewd_A 4 RRKIAVIGS-GQIGGNIAYIVGKDNL--ADVVLFDIAEGIP---QGKALDITHS-----M-VMFG------STSKVIGT- 64 (317)
T ss_dssp CCEEEEECC-SHHHHHHHHHHHHHTC--CEEEEECSSSSHH---HHHHHHHHHH-----H-HHHT------CCCCEEEE-
T ss_pred CCEEEEECC-CHHHHHHHHHHHhCCC--ceEEEEeCCchHH---HHHHHHHHhh-----h-hhcC------CCcEEEEC-
Confidence 468999997 9999999999999873 2688888865322 1111011000 0 0000 01222211
Q ss_pred ccCCCCCCCCChhhhHHHHhcCccEEEEcCccCCc-cccHHHHHHHhHHHHHHHHHHHHhc
Q 010075 92 GDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF-DERYDVAFGINTLGVIHLVNFAKKC 151 (519)
Q Consensus 92 gDl~~~~lgls~~~~~~~l~~~vdiViH~Aa~v~f-~~~~~~~~~~Nv~gt~~ll~~a~~~ 151 (519)
.| . ..+++.|+||-+++...- .....+....|....+.+++...+.
T Consensus 65 ~d------------~--~a~~~aDiVi~avg~p~~~g~~r~d~~~~~~~i~~~i~~~i~~~ 111 (317)
T 2ewd_A 65 DD------------Y--ADISGSDVVIITASIPGRPKDDRSELLFGNARILDSVAEGVKKY 111 (317)
T ss_dssp SC------------G--GGGTTCSEEEECCCCSSCCSSCGGGGHHHHHHHHHHHHHHHHHH
T ss_pred CC------------H--HHhCCCCEEEEeCCCCCCCCCcHHHHHHhhHHHHHHHHHHHHHH
Confidence 11 1 234689999999976432 2222234566777777777777665
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| 519 | ||||
| d2b69a1 | 312 | c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1 | 6e-09 | |
| d1db3a_ | 357 | c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escheric | 1e-08 | |
| d1kewa_ | 361 | c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) { | 8e-07 | |
| d1r6da_ | 322 | c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) { | 5e-06 | |
| d1t2aa_ | 347 | c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (H | 6e-06 | |
| d1sb8a_ | 341 | c.2.1.2 (A:) UDP-N-acetylglucosamine 4-epimerase W | 3e-04 | |
| d1xq1a_ | 259 | c.2.1.2 (A:) Tropinone reductase {Thale cress (Ara | 4e-04 | |
| d1hxha_ | 253 | c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydroge | 0.001 | |
| d2d1ya1 | 248 | c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {T | 0.002 | |
| d1udca_ | 338 | c.2.1.2 (A:) Uridine diphosphogalactose-4-epimeras | 0.002 | |
| d1z45a2 | 347 | c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-ep | 0.003 | |
| d2ae2a_ | 259 | c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datu | 0.003 | |
| d1oc2a_ | 346 | c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) { | 0.004 |
| >d2b69a1 c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 312 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: UDP-glucuronate decarboxylase 1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 55.1 bits (132), Expect = 6e-09
Identities = 51/356 (14%), Positives = 108/356 (30%), Gaps = 94/356 (26%)
Query: 13 KTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLK 72
K IL++G GFV +K++ V
Sbjct: 2 KRILITGGAGFVGSHLTDKLMMDGHEV--------------------------------- 28
Query: 73 EKWGTRLNSFISEKITFVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKFDERYD- 131
T +++F + + V I E+ L + ++ E L+ E+D + + A+
Sbjct: 29 ----TVVDNFFTGRKRNVEHWIGHENFELINHDVVEPLYIEVDQIYHLASPASPPNYMYN 84
Query: 132 --VAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAE 189
NT+G ++++ AK+ + ST+ V G+
Sbjct: 85 PIKTLKTNTIGTLNMLGLAKRVG--ARLLLASTSEVYGD--------------------- 121
Query: 190 MKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLMQ--QSKE 247
+ PQ E N G Y K + E + +E
Sbjct: 122 ------------PEVHPQSEDYWGHVN-------PIGPRACYDEGKRVAETMCYAYMKQE 162
Query: 248 NLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDM 307
+ + + R G G V ++ + + QG + G V
Sbjct: 163 GVEVRVARIFNTFGPRMHMNDGRV-----VSNFILQALQGEPLTVYGSGSQTRAFQYVSD 217
Query: 308 VVNAMIVAMVAHAKQPSDANIYHVGSSLRNPVTLGLQVANTVFHNFFKGVYNDLRK 363
+VN ++ M + ++ ++G+ + + Q+ + + + + +
Sbjct: 218 LVNGLVALM-----NSNVSSPVNLGNPEEHTILEFAQLIKNLVGSGSEIQFLSEAQ 268
|
| >d1db3a_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escherichia coli [TaxId: 562]} Length = 357 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Escherichia coli [TaxId: 562]
Score = 54.8 bits (131), Expect = 1e-08
Identities = 48/326 (14%), Positives = 86/326 (26%), Gaps = 80/326 (24%)
Query: 13 KTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLK 72
K L++GVTG E +L + V +++ FN +
Sbjct: 2 KVALITGVTGQDGSYLAEFLL-------EKGYEVHGIKRRASS------------FNTER 42
Query: 73 EKWGTRLNSFISEKITFVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKFDERYDV 132
+ + K GD+S D L+E +E+ + + + E +
Sbjct: 43 VDHIYQDPHTCNPKFHLHYGDLS--DTSNLTRILREVQPDEVYNLGAMSHVAVSFESPEY 100
Query: 133 AFGINTLGVIHLVNFAKK--CVKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEM 190
++ +G + L+ + K F ST+ + G
Sbjct: 101 TADVDAMGTLRLLEAIRFLGLEKKTRFYQASTSELYGL---------------------- 138
Query: 191 KVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLMQQSKE--N 248
+ PQKE T F + Y K + +E
Sbjct: 139 -----------VQEIPQKETTPFYPR------------SPYAVAKLYAYWITVNYRESYG 175
Query: 249 LSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLV-GETKVIMDVIPVDM 307
+ P G + I AQG CL G + D
Sbjct: 176 MYACNGILFNHES----PRRGETFVTRKITRAIANIAQGLESCLYLGNMDSLRDWGHAKD 231
Query: 308 VVNAMIVAMVAHAKQPSDANIYHVGS 333
V + + Q + + +
Sbjct: 232 YVKMQWMML-----QQEQPEDFVIAT 252
|
| >d1kewa_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]} Length = 361 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: dTDP-glucose 4,6-dehydratase (RmlB) species: Streptococcus suis, serotype 2 [TaxId: 1307]
Score = 49.0 bits (116), Expect = 8e-07
Identities = 55/371 (14%), Positives = 108/371 (29%), Gaps = 92/371 (24%)
Query: 15 ILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEK 74
IL++G GF+ + I+ K V D + A ++ +
Sbjct: 3 ILITGGAGFIGSAVVRHII------KNTQDTVVNIDKLTYAGNLESLSDISE-------- 48
Query: 75 WGTRLNSFISEKITFVPGDISSEDLGLKDSNLKEELWNEL--DIMVNSAAITKFDERYD- 131
S + F DI DS ++ + D +++ AA + D
Sbjct: 49 ---------SNRYNFEHADIC-------DSAEITRIFEQYQPDAVMHLAAESHVDRSITG 92
Query: 132 --VAFGINTLGVIHLVNFAKKC--------VKLKVFVHVSTAYVAGERTGLILENPLDGA 181
N +G L+ A+K F H+ST V G+
Sbjct: 93 PAAFIETNIVGTYALLEVARKYWSALGEDKKNNFRFHHISTDEVYGDLP----------- 141
Query: 182 SGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEML 241
D + L T AP + Y +K + L
Sbjct: 142 ---HPDEVENSVTLPLFTETTAYAPS---------------------SPYSASKASSDHL 177
Query: 242 MQQSKE--NLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVI 299
++ + L ++ + G P + K I + + + +G + G+ I
Sbjct: 178 VRAWRRTYGLPTIVTNCSNNYG------PYHFPE-KLIPLVILNALEGKPLPIYGKGDQI 230
Query: 300 MDVIPVDMVVNAMIVAMVAHAKQPSDANIYHVGSSLRNPVTLGLQVANTVFHNFFKGVYN 359
D + V+ A+ + + + Y++G L + +
Sbjct: 231 RDWLYVEDHARALHMVV----TEGKAGETYNIGGH-NEKKNLDVVFTICDLLDEIVPKAT 285
Query: 360 DLRKKVKFVMR 370
R+++ +V
Sbjct: 286 SYREQITYVAD 296
|
| >d1r6da_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces venezuelae [TaxId: 54571]} Length = 322 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: dTDP-glucose 4,6-dehydratase (RmlB) species: Streptomyces venezuelae [TaxId: 54571]
Score = 46.0 bits (108), Expect = 5e-06
Identities = 48/320 (15%), Positives = 84/320 (26%), Gaps = 81/320 (25%)
Query: 15 ILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEK 74
+LV+G GF+ F+ ++L +EV+ D
Sbjct: 3 LLVTGGAGFIGSHFVRQLLAGAYPDVPA-----------------DEVIVLDSLT-YAGN 44
Query: 75 WGTRLNSFISEKITFVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKFDERYDVAF 134
++ FV GDI L ++ + + + +I +
Sbjct: 45 RANLAPVDADPRLRFVHGDIRDAGLLARELRGVDAIVHFAAESHVDRSIAGASVFTET-- 102
Query: 135 GINTLGVIHLVNFAKKCVKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVID 194
N G L+ A + VHVST V G
Sbjct: 103 --NVQGTQTLLQCAVDA-GVGRVVHVSTNQVYGS-------------------------- 133
Query: 195 QKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLMQ--QSKENLSLV 252
E + N + Y +K +++ + L +
Sbjct: 134 -------IDSGSWTESSPLEPN------------SPYAASKAGSDLVARAYHRTYGLDVR 174
Query: 253 IIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAM 312
I R G Y+ P K I G L G+ + + + D +
Sbjct: 175 ITRCCNNYGPYQHPE-------KLIPLFVTNLLDGGTLPLYGDGANVREWVHTDDHCRGI 227
Query: 313 IVAMVAHAKQPSDANIYHVG 332
+ + IYH+G
Sbjct: 228 ALVL----AGGRAGEIYHIG 243
|
| >d1t2aa_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (Homo sapiens) [TaxId: 9606]} Length = 347 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Human (Homo sapiens) [TaxId: 9606]
Score = 46.1 bits (108), Expect = 6e-06
Identities = 43/322 (13%), Positives = 83/322 (25%), Gaps = 74/322 (22%)
Query: 13 KTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLK 72
L++G+TG E +L + V S++
Sbjct: 2 NVALITGITGQDGSYLAEFLL-------EKGYEVHGIVRRSSSFNTGR-----------I 43
Query: 73 EKWGTRLNSFISEKITFVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKFDERYDV 132
E + I + GD++ D + E E+ + + + + +
Sbjct: 44 EHLYKNPQAHIEGNMKLHYGDLT--DSTCLVKIINEVKPTEIYNLGAQSHVKISFDLAEY 101
Query: 133 AFGINTLGVIHLVNFAKKC--VKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEM 190
++ +G + L++ K C + F ST+ + G+
Sbjct: 102 TADVDGVGTLRLLDAVKTCGLINSVKFYQASTSELYGK---------------------- 139
Query: 191 KVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLMQ--QSKEN 248
+ PQKE T F + Y K ++ + N
Sbjct: 140 -----------VQEIPQKETTPFYPR------------SPYGAAKLYAYWIVVNFREAYN 176
Query: 249 LSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMV 308
L V + K ++ +G D
Sbjct: 177 LFAVNGILFNHESPRRGA---NFVTRKISRSVAKIYLGQLECFSLGNLDAKRDWGHAKDY 233
Query: 309 VNAMIVAMVAHAKQPSDANIYH 330
V AM ++ +P D I
Sbjct: 234 VEAMW--LMLQNDEPEDFVIAT 253
|
| >d1sb8a_ c.2.1.2 (A:) UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomonas aeruginosa [TaxId: 287]} Length = 341 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: UDP-N-acetylglucosamine 4-epimerase WbpP species: Pseudomonas aeruginosa [TaxId: 287]
Score = 40.7 bits (94), Expect = 3e-04
Identities = 50/326 (15%), Positives = 102/326 (31%), Gaps = 74/326 (22%)
Query: 11 ENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNV 70
+ K L++GV GF+ +E + L+ +V+ D F
Sbjct: 15 QPKVWLITGVAGFIGSNLLETL-----------------------LKLDQKVVGLDNFAT 51
Query: 71 LKEKWGTRLNSFISEKITFVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKFDERY 130
++ + S +SEK I + L D N + + ++ +
Sbjct: 52 GHQRNLDEVRSLVSEKQWSNFKFIQGDIRNLDDCNNACAGVDYVLHQAALGSVPRSINDP 111
Query: 131 DVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEM 190
+ N G ++++ A+ K++ F + +++ G+ GL
Sbjct: 112 ITSNATNIDGFLNMLIAARDA-KVQSFTYAASSSTYGDHPGL------------------ 152
Query: 191 KVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLMQ--QSKEN 248
P+ E T+ + Y TK + E+
Sbjct: 153 ---------------PKVEDTIGK------------PLSPYAVTKYVNELYADVFSRCYG 185
Query: 249 LSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMV 308
S + +R V G ++P + I + QG+ + G+ + D ++
Sbjct: 186 FSTIGLRYFNVFGRRQDPNGAYA---AVIPKWTSSMIQGDDVYINGDGETSRDFCYIENT 242
Query: 309 VNAMIVAMVAHAKQPSDANIYHVGSS 334
V A ++A A + VG
Sbjct: 243 VQANLLAATAGLDARNQVYNIAVGGR 268
|
| >d1xq1a_ c.2.1.2 (A:) Tropinone reductase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 259 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Tropinone reductase species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Score = 39.6 bits (92), Expect = 4e-04
Identities = 28/156 (17%), Positives = 48/156 (30%), Gaps = 40/156 (25%)
Query: 10 LENKTILVSGVTG----FVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAK 65
L+ KT+LV+G T + + F + + L NE L+K
Sbjct: 6 LKAKTVLVTGGTKGIGHAIVEEFAGFGAVIH-----------TCARNEYEL---NECLSK 51
Query: 66 DVFNVLKEKWGTRLNSFISEKITFVPGDISSEDLGLK-DSNLKEELWNELDIMVNSAAIT 124
++K ++T D S K + +LDI++N+
Sbjct: 52 -----WQKKGF---------QVTGSVCDASLRPEREKLMQTVSSMFGGKLDILINNLGAI 97
Query: 125 KF-------DERYDVAFGINTLGVIHLVNFAKKCVK 153
+ E + N HL A +K
Sbjct: 98 RSKPTLDYTAEDFSFHISTNLESAYHLSQLAHPLLK 133
|
| >d1hxha_ c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]} Length = 253 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 3beta/17beta hydroxysteroid dehydrogenase species: Comamonas testosteroni [TaxId: 285]
Score = 38.4 bits (89), Expect = 0.001
Identities = 35/171 (20%), Positives = 58/171 (33%), Gaps = 42/171 (24%)
Query: 10 LENKTILVSGVT---GF-VAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAK 65
L+ K LV+G G V K+ + + +V +DI+ AA + LA
Sbjct: 4 LQGKVALVTGGASGVGLEVVKLLLGEGAKVA-----------FSDINEAAG----QQLAA 48
Query: 66 DVFNVLKEKWGTRLNSFISEKITFVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITK 125
+ + E+ FV D+SSE + L+++VN+A I
Sbjct: 49 E----------------LGERSMFVRHDVSSEADWTLVMAAVQRRLGTLNVLVNNAGILL 92
Query: 126 F-------DERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAYVAGER 169
E + INT V +K ++ A V+
Sbjct: 93 PGDMETGRLEDFSRLLKINTESVFIGCQQGIAAMKETGGSIINMASVSSWL 143
|
| >d2d1ya1 c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {Thermus thermophilus [TaxId: 274]} Length = 248 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein TTHA0369 species: Thermus thermophilus [TaxId: 274]
Score = 37.9 bits (88), Expect = 0.002
Identities = 18/92 (19%), Positives = 32/92 (34%), Gaps = 8/92 (8%)
Query: 86 KITFVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF-------DERYDVAFGINT 138
F D+ E ++ +D++VN+AAI + +N
Sbjct: 49 GGAFFQVDLEDERERVRFVEEAAYALGRVDVLVNNAAIAAPGSALTVRLPEWRRVLEVNL 108
Query: 139 LGVIHLVN-FAKKCVKLKVFVHVSTAYVAGER 169
+HL A++ K+ V+ A V G
Sbjct: 109 TAPMHLSALAAREMRKVGGGAIVNVASVQGLF 140
|
| >d1udca_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Escherichia coli [TaxId: 562]} Length = 338 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) species: Escherichia coli [TaxId: 562]
Score = 38.0 bits (87), Expect = 0.002
Identities = 28/159 (17%), Positives = 58/159 (36%), Gaps = 36/159 (22%)
Query: 15 ILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEK 74
+LV+G +G++ ++ L+ ++V+ D K
Sbjct: 3 VLVTGGSGYIGSHTCVQL-----------------------LQNGHDVIILDNLCNSKRS 39
Query: 75 WGTRLNSFISEKITFVPGDISSEDLGLKDSNLKEELWNEL--DIMVNSAAITKFDERYD- 131
+ + TFV GDI + L E+ ++ D +++ A + E
Sbjct: 40 VLPVIERLGGKHPTFVEGDIR-------NEALMTEILHDHAIDTVIHFAGLKAVGESVQK 92
Query: 132 --VAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAYVAGE 168
+ N G + L++ + +K F+ S+A V G+
Sbjct: 93 PLEYYDNNVNGTLRLISAMRAA-NVKNFIFSSSATVYGD 130
|
| >d1z45a2 c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 347 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 37.7 bits (86), Expect = 0.003
Identities = 26/168 (15%), Positives = 54/168 (32%), Gaps = 32/168 (19%)
Query: 13 KTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLK 72
K +LV+G G++ + ++ + + + D +
Sbjct: 2 KIVLVTGGAGYIGSHTVVEL-----------------------IENGYDCVVADNLSNST 38
Query: 73 EKWGTRLNSFISEKITFVPGDISSEDLGLKDSNLKEELWNELDIMVNSAA---ITKFDER 129
RL I F D+ + K ++D +++ A + + +
Sbjct: 39 YDSVARLEVLTKHHIPFYEVDLCD-----RKGLEKVFKEYKIDSVIHFAGLKAVGESTQI 93
Query: 130 YDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAYVAGERTGLILENP 177
+ N LG + L+ ++ FV S+A V G+ T P
Sbjct: 94 PLRYYHNNILGTVVLLELMQQYNV-SKFVFSSSATVYGDATRFPNMIP 140
|
| >d2ae2a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), II [TaxId: 4076]} Length = 259 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Tropinone reductase species: Jimsonweed (Datura stramonium), II [TaxId: 4076]
Score = 36.9 bits (85), Expect = 0.003
Identities = 29/153 (18%), Positives = 52/153 (33%), Gaps = 34/153 (22%)
Query: 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFN 69
LE T LV+G + + +E++ + +V + L D
Sbjct: 6 LEGCTALVTGGSRGIGYGIVEELASLGASV-------YTCSRNQKEL--------NDCLT 50
Query: 70 VLKEKWGTRLNSFISEKITFVPGDISSEDLGLKD--SNLKEELWNELDIMVNSAAITKF- 126
+ K K+ D+SS ++ + + +L+I+VN+A I +
Sbjct: 51 QWRSKGF---------KVEASVCDLSSRS-ERQELMNTVANHFHGKLNILVNNAGIVIYK 100
Query: 127 ------DERYDVAFGINTLGVIHLVNFAKKCVK 153
E Y + IN HL A +K
Sbjct: 101 EAKDYTVEDYSLIMSINFEAAYHLSVLAHPFLK 133
|
| >d1oc2a_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]} Length = 346 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: dTDP-glucose 4,6-dehydratase (RmlB) species: Streptococcus suis, serotype 2 [TaxId: 1307]
Score = 37.3 bits (85), Expect = 0.004
Identities = 51/323 (15%), Positives = 91/323 (28%), Gaps = 77/323 (23%)
Query: 13 KTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLK 72
K I+V+G GF+ F+ + P+V V D
Sbjct: 3 KNIIVTGGAGFIGSNFVHYVYNNHPDVH---------------------VTVLDKLTYAG 41
Query: 73 EKWGTRLNSFISEKITFVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKFDERYD- 131
K L + + +++ V GDI+ D+ L ++L + D +V+ AA + D +
Sbjct: 42 NKA--NLEAILGDRVELVVGDIA-------DAELVDKLAAKADAIVHYAAESHNDNSLND 92
Query: 132 --VAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAE 189
N +G F HVST V G+ L +
Sbjct: 93 PSPFIHTNFIGTYT--LLEAARKYDIRFHHVSTDEVYGD---------------LPLRED 135
Query: 190 MKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLMQ--QSKE 247
+ + E T + Y TK +++++
Sbjct: 136 LPGHGEGPGEKFTAETNYNPS------------------SPYSSTKAASDLIVKAWVRSF 177
Query: 248 NLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDM 307
+ I + G Y+ + I G L GE K + D I +
Sbjct: 178 GVKATISNCSNNYGPYQHIEKFIPRQITNI-------LAGIKPKLYGEGKNVRDWIHTND 230
Query: 308 VVNAMIVAMVAHAKQPSDANIYH 330
+ + +
Sbjct: 231 HSTGVWAILTKGRMGETYLIGAD 253
|
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 519 | |||
| d1db3a_ | 357 | GDP-mannose 4,6-dehydratase {Escherichia coli [Tax | 99.98 | |
| d2b69a1 | 312 | UDP-glucuronate decarboxylase 1 {Human (Homo sapie | 99.97 | |
| d1r6da_ | 322 | dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces | 99.97 | |
| d1kewa_ | 361 | dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus | 99.97 | |
| d1sb8a_ | 341 | UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomo | 99.97 | |
| d1udca_ | 338 | Uridine diphosphogalactose-4-epimerase (UDP-galact | 99.97 | |
| d2blla1 | 342 | Polymyxin resistance protein ArnA (PrmI) {Escheric | 99.96 | |
| d2c5aa1 | 363 | GDP-mannose-3', 5'-epimerase {Thale cress (Arabido | 99.96 | |
| d1oc2a_ | 346 | dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus | 99.96 | |
| d1z45a2 | 347 | Uridine diphosphogalactose-4-epimerase (UDP-galact | 99.96 | |
| d1y1pa1 | 342 | Aldehyde reductase II {Sporobolomyces salmonicolor | 99.96 | |
| d1rpna_ | 321 | GDP-mannose 4,6-dehydratase {Pseudomonas aeruginos | 99.96 | |
| d1t2aa_ | 347 | GDP-mannose 4,6-dehydratase {Human (Homo sapiens) | 99.96 | |
| d1i24a_ | 393 | Sulfolipid biosynthesis protein SQD1 {Thale cress | 99.96 | |
| d1gy8a_ | 383 | Uridine diphosphogalactose-4-epimerase (UDP-galact | 99.95 | |
| d1ek6a_ | 346 | Uridine diphosphogalactose-4-epimerase (UDP-galact | 99.95 | |
| d1e6ua_ | 315 | GDP-4-keto-6-deoxy-d-mannose epimerase/reductase ( | 99.95 | |
| d1n7ha_ | 339 | GDP-mannose 4,6-dehydratase {Thale-cress (Arabidop | 99.94 | |
| d2bkaa1 | 232 | TAT-interacting protein TIP30 {Human (Homo sapiens | 99.93 | |
| d1orra_ | 338 | CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId: | 99.93 | |
| d1rkxa_ | 356 | CDP-glucose-4,6-dehydratase {Yersinia pseudotuberc | 99.93 | |
| d1vl0a_ | 281 | DTDP-4-dehydrorhamnose reductase RfbD {Clostridium | 99.88 | |
| d1eq2a_ | 307 | ADP-L-glycero-D-mannoheptose 6-epimerase {Escheric | 99.87 | |
| d1hdoa_ | 205 | Biliverdin IX beta reductase {Human (Homo sapiens) | 99.87 | |
| d2a35a1 | 212 | Hypothetical protein PA4017 {Pseudomonas aeruginos | 99.86 | |
| d1n2sa_ | 298 | dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {S | 99.85 | |
| d1qyda_ | 312 | Pinoresinol-lariciresinol reductase {Giant arborvi | 99.85 | |
| d2q46a1 | 252 | Hypothetical protein At5g02240 (T7H20_290) {Thale | 99.85 | |
| d1qyca_ | 307 | Phenylcoumaran benzylic ether reductase {Loblolly | 99.82 | |
| d1xgka_ | 350 | Negative transcriptional regulator NmrA {Aspergill | 99.72 | |
| d1nffa_ | 244 | Putative oxidoreductase Rv2002 {Mycobacterium tube | 99.68 | |
| d1sbya1 | 254 | Drosophila alcohol dehydrogenase {Fly (Drosophila | 99.67 | |
| d1uzma1 | 237 | beta-keto acyl carrier protein reductase {Mycobact | 99.66 | |
| d2d1ya1 | 248 | Hypothetical protein TTHA0369 {Thermus thermophilu | 99.65 | |
| d1pr9a_ | 244 | Carbonyl reductase {Human (Homo sapiens) [TaxId: 9 | 99.65 | |
| d1q7ba_ | 243 | beta-keto acyl carrier protein reductase {Escheric | 99.65 | |
| d2ew8a1 | 247 | (s)-1-phenylethanol dehydrogenase {Azoarcus sp. eb | 99.65 | |
| d1hdca_ | 254 | 3-alpha,20-beta-hydroxysteroid dehydrogenase {Stre | 99.64 | |
| d1vl8a_ | 251 | Gluconate 5-dehydrogenase {Thermotoga maritima [Ta | 99.64 | |
| d1fmca_ | 255 | 7-alpha-hydroxysteroid dehydrogenase {Escherichia | 99.64 | |
| d1x1ta1 | 260 | D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas | 99.64 | |
| d1geea_ | 261 | Glucose dehydrogenase {Bacillus megaterium [TaxId: | 99.63 | |
| d1ulsa_ | 242 | beta-keto acyl carrier protein reductase {Thermus | 99.63 | |
| d2bgka1 | 268 | Rhizome secoisolariciresinol dehydrogenase {Mayapp | 99.63 | |
| d2ae2a_ | 259 | Tropinone reductase {Jimsonweed (Datura stramonium | 99.62 | |
| d1cyda_ | 242 | Carbonyl reductase {Mouse (Mus musculus) [TaxId: 1 | 99.62 | |
| d2c07a1 | 251 | beta-keto acyl carrier protein reductase {Malaria | 99.62 | |
| d1k2wa_ | 256 | Sorbitol dehydrogenase {Rhodobacter sphaeroides [T | 99.62 | |
| d1ydea1 | 250 | Retinal dehydrogenase/reductase 3 {Human (Homo sap | 99.61 | |
| d1xq1a_ | 259 | Tropinone reductase {Thale cress (Arabidopsis thal | 99.61 | |
| d1iy8a_ | 258 | Levodione reductase {Corynebacterium aquaticum [Ta | 99.61 | |
| d1yxma1 | 297 | Peroxisomal trans 2-enoyl CoA reductase {Human (Ho | 99.61 | |
| d1ae1a_ | 258 | Tropinone reductase {Jimsonweed (Datura stramonium | 99.6 | |
| d1zk4a1 | 251 | R-specific alcohol dehydrogenase {Lactobacillus br | 99.6 | |
| d1spxa_ | 264 | Glucose dehydrogenase (5l265) {Nematode (Caenorhab | 99.6 | |
| d1o5ia_ | 234 | beta-keto acyl carrier protein reductase {Thermoto | 99.6 | |
| d1xhla_ | 274 | Hypothetical protein F25D1.5 {Caenorhabditis elega | 99.58 | |
| d1bdba_ | 276 | Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Ps | 99.58 | |
| d1yb1a_ | 244 | 17-beta-hydroxysteroid dehydrogenase type XI {Huma | 99.58 | |
| d1hxha_ | 253 | 3beta/17beta hydroxysteroid dehydrogenase {Comamon | 99.58 | |
| d2rhca1 | 257 | beta-keto acyl carrier protein reductase {Streptom | 99.58 | |
| d1zema1 | 260 | Xylitol dehydrogenase {Gluconobacter oxydans [TaxI | 99.58 | |
| d1gega_ | 255 | meso-2,3-butanediol dehydrogenase {Klebsiella pneu | 99.57 | |
| d1h5qa_ | 260 | Mannitol dehydrogenase {Mushroom (Agaricus bisporu | 99.57 | |
| d1xkqa_ | 272 | Hypothetical protein R05D8.7 {Caenorhabditis elega | 99.57 | |
| d1edoa_ | 244 | beta-keto acyl carrier protein reductase {Oil seed | 99.55 | |
| d1ulua_ | 256 | Enoyl-ACP reductase {Thermus thermophilus [TaxId: | 99.55 | |
| d1xg5a_ | 257 | Putative dehydrogenase ARPG836 (MGC4172) {Human (H | 99.55 | |
| d2fr1a1 | 259 | Erythromycin synthase, eryAI, 1st ketoreductase mo | 99.54 | |
| d1g0oa_ | 272 | 1,3,8-trihydroxynaphtalene reductase (THNR, naphto | 99.54 | |
| d1gz6a_ | 302 | (3R)-hydroxyacyl-CoA dehydrogenase domain of estra | 99.53 | |
| d2a4ka1 | 241 | beta-keto acyl carrier protein reductase {Thermus | 99.52 | |
| d1ja9a_ | 259 | 1,3,6,8-tetrahydroxynaphthalene reductase {Rice bl | 99.52 | |
| d2bd0a1 | 240 | Bacterial sepiapterin reductase {Chlorobium tepidu | 99.52 | |
| d2gdza1 | 254 | 15-hydroxyprostaglandin dehydrogenase, PGDH {Human | 99.52 | |
| d2ag5a1 | 245 | Dehydrogenase/reductase SDR family member 6, DHRS6 | 99.5 | |
| d1jtva_ | 285 | Human estrogenic 17beta-hydroxysteroid dehydrogena | 99.49 | |
| d1yo6a1 | 250 | Putative carbonyl reductase sniffer {Caenorhabditi | 99.47 | |
| d1w6ua_ | 294 | 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {H | 99.46 | |
| d1ooea_ | 235 | Dihydropteridin reductase (pteridine reductase) {N | 99.45 | |
| d1oaaa_ | 259 | Sepiapterin reductase {Mouse (Mus musculus) [TaxId | 99.45 | |
| d1snya_ | 248 | Carbonyl reductase sniffer {Fruit fly (Drosophila | 99.45 | |
| d1dhra_ | 236 | Dihydropteridin reductase (pteridine reductase) {R | 99.44 | |
| d1zmta1 | 252 | Halohydrin dehalogenase HheC {Agrobacterium tumefa | 99.4 | |
| d1qsga_ | 258 | Enoyl-ACP reductase {Escherichia coli [TaxId: 562] | 99.4 | |
| d1xu9a_ | 269 | 11-beta-hydroxysteroid dehydrogenase 1 {Human (Hom | 99.4 | |
| d2o23a1 | 248 | Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Ho | 99.39 | |
| d2pd4a1 | 274 | Enoyl-ACP reductase {Helicobacter pylori [TaxId: 2 | 99.33 | |
| d1wmaa1 | 275 | Carbonyl reductase/20beta-hydroxysteroid dehydroge | 99.3 | |
| d1uaya_ | 241 | Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus t | 99.19 | |
| d2h7ma1 | 268 | Enoyl-ACP reductase {Mycobacterium tuberculosis, T | 99.18 | |
| d1d7oa_ | 297 | Enoyl-ACP reductase {Oil seed rape (Brassica napus | 99.12 | |
| d1uh5a_ | 329 | Enoyl-ACP reductase {Malaria parasite (Plasmodium | 99.1 | |
| d1e7wa_ | 284 | Dihydropteridin reductase (pteridine reductase) {L | 99.07 | |
| d1mxha_ | 266 | Dihydropteridin reductase (pteridine reductase) {T | 98.99 | |
| d1fjha_ | 257 | 3-alpha-hydroxysteroid dehydrogenase {Comamonas te | 98.84 | |
| d1luaa1 | 191 | Methylene-tetrahydromethanopterin dehydrogenase {M | 98.69 | |
| d1mlda1 | 144 | Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 982 | 97.15 | |
| d2cmda1 | 145 | Malate dehydrogenase {Escherichia coli [TaxId: 562 | 97.15 | |
| d1hyea1 | 145 | MJ0490, lactate/malate dehydrogenase {Archaeon Met | 96.84 | |
| d1t4ba1 | 146 | Aspartate beta-semialdehyde dehydrogenase {Escheri | 96.69 | |
| d1ez4a1 | 146 | Lactate dehydrogenase {Lactobacillus pentosus [Tax | 96.6 | |
| d7mdha1 | 175 | Malate dehydrogenase {Sorghum (Sorghum vulgare), c | 96.6 | |
| d1vi2a1 | 182 | Putative shikimate dehydrogenase YdiB {Escherichia | 96.54 | |
| d1o6za1 | 142 | Malate dehydrogenase {Archaeon Haloarcula marismor | 96.49 | |
| d1y7ta1 | 154 | Malate dehydrogenase {Thermus thermophilus [TaxId: | 96.44 | |
| d1lssa_ | 132 | Ktn Mja218 {Archaeon Methanococcus jannaschii [Tax | 96.43 | |
| d2hjsa1 | 144 | Usg-1 protein homolog PA3116 {Pseudomonas aerugino | 96.27 | |
| d1u7za_ | 223 | Coenzyme A biosynthesis bifunctional protein CoaBC | 96.22 | |
| d1e5qa1 | 182 | Saccharopine reductase {Rice blast fungus (Magnapo | 96.1 | |
| d1guza1 | 142 | Malate dehydrogenase {Chlorobium vibrioforme [TaxI | 96.06 | |
| d1mb4a1 | 147 | Aspartate beta-semialdehyde dehydrogenase {Vibrio | 96.03 | |
| d1ldna1 | 148 | Lactate dehydrogenase {Bacillus stearothermophilus | 95.97 | |
| d1v3va2 | 182 | Leukotriene b4 12-hydroxydehydrogenase/prostagland | 95.86 | |
| d1o8ca2 | 77 | Hypothetical protein YhdH {Escherichia coli [TaxId | 95.73 | |
| d1xa0a2 | 176 | B. subtilis YhfP homologue {Bacillus stearothermop | 95.67 | |
| d1jaya_ | 212 | Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archae | 95.56 | |
| d1iz0a2 | 171 | Quinone oxidoreductase {Thermus thermophilus [TaxI | 95.55 | |
| d1y6ja1 | 142 | Lactate dehydrogenase {Clostridium thermocellum [T | 95.51 | |
| d1a5za1 | 140 | Lactate dehydrogenase {Thermotoga maritima [TaxId: | 95.49 | |
| d1pzga1 | 154 | Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5 | 95.45 | |
| d1llda1 | 143 | Lactate dehydrogenase {Bifidobacterium longum, str | 95.37 | |
| d5mdha1 | 154 | Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 982 | 95.36 | |
| d1tt7a2 | 167 | Hypothetical protein YhfP {Bacillus subtilis [TaxI | 95.14 | |
| d1yb5a2 | 174 | Quinone oxidoreductase {Human (Homo sapiens) [TaxI | 95.07 | |
| d1pqwa_ | 183 | Putative enoyl reductase domain of polyketide synt | 95.02 | |
| d1qora2 | 179 | Quinone oxidoreductase {Escherichia coli [TaxId: 5 | 94.92 | |
| d1gpja2 | 159 | Glutamyl tRNA-reductase middle domain {Archaeon Me | 94.88 | |
| d1hyha1 | 146 | L-2-hydroxyisocapronate dehydrogenase, L-HICDH {La | 94.75 | |
| d1i0za1 | 160 | Lactate dehydrogenase {Human (Homo sapiens), heart | 94.71 | |
| d1ojua1 | 142 | Malate dehydrogenase {Archaeon Archaeoglobus fulgi | 94.52 | |
| d1uxja1 | 142 | Malate dehydrogenase {Chloroflexus aurantiacus [Ta | 94.52 | |
| d1vkna1 | 176 | N-acetyl-gamma-glutamyl-phosphate reductase ArgC { | 94.47 | |
| d1t2da1 | 150 | Lactate dehydrogenase {Malaria parasite (Plasmodiu | 94.28 | |
| d2g17a1 | 179 | N-acetyl-gamma-glutamyl-phosphate reductase ArgC { | 94.11 | |
| d2cvoa1 | 183 | Putative semialdehyde dehydrogenase {Rice (Oryza s | 93.92 | |
| d2jfga1 | 93 | UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase | 93.88 | |
| d2gz1a1 | 154 | Aspartate beta-semialdehyde dehydrogenase {Strepto | 93.51 | |
| d1ks9a2 | 167 | Ketopantoate reductase PanE {Escherichia coli [Tax | 93.22 | |
| d1vj0a2 | 182 | Hypothetical protein TM0436 {Thermotoga maritima [ | 93.05 | |
| d1jvba2 | 170 | Alcohol dehydrogenase {Archaeon Sulfolobus solfata | 92.83 | |
| d1r0ka2 | 150 | 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Z | 92.81 | |
| d2hmva1 | 134 | Ktn bsu222 {Bacillus subtilis [TaxId: 1423]} | 92.77 | |
| d1piwa2 | 168 | Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeas | 92.62 | |
| d2ldxa1 | 159 | Lactate dehydrogenase {Mouse (Mus musculus) [TaxId | 92.46 | |
| d1e3ja2 | 170 | Ketose reductase (sorbitol dehydrogenase) {Silverl | 91.6 | |
| d1pjqa1 | 113 | Siroheme synthase CysG, domain 1 {Salmonella typhi | 91.45 | |
| d1o89a2 | 177 | Hypothetical protein YhdH {Escherichia coli [TaxId | 91.3 | |
| d1nyta1 | 170 | Shikimate 5-dehydrogenase AroE {Escherichia coli [ | 91.24 | |
| d1jw9b_ | 247 | Molybdenum cofactor biosynthesis protein MoeB {Esc | 91.17 | |
| d1uufa2 | 168 | Hypothetical protein YahK {Escherichia coli [TaxId | 91.16 | |
| d1gu7a2 | 189 | 2,4-dienoyl-CoA reductase {Yeast (Candida tropical | 91.09 | |
| d1p77a1 | 171 | Shikimate 5-dehydrogenase AroE {Haemophilus influe | 91.03 | |
| d1id1a_ | 153 | Rck domain from putative potassium channel Kch {Es | 90.85 | |
| d1vj1a2 | 187 | Putative zinc-binding alcohol dehydrogenase {Mouse | 90.7 | |
| d1f8fa2 | 174 | Benzyl alcohol dehydrogenase {Acinetobacter calcoa | 89.75 | |
| d1jqba2 | 174 | Bacterial secondary alcohol dehydrogenase {Clostri | 89.75 | |
| d2jhfa2 | 176 | Alcohol dehydrogenase {Horse (Equus caballus) [Tax | 88.46 | |
| d2pv7a2 | 152 | Prephenate dehydrogenase TyrA {Haemophilus influen | 88.4 | |
| d1fcda1 | 186 | Flavocytochrome c sulfide dehydrogenase, FCSD, fla | 87.44 | |
| d1pl8a2 | 171 | Ketose reductase (sorbitol dehydrogenase) {Human ( | 87.32 | |
| d1yovb1 | 426 | UBA3 {Human (Homo sapiens) [TaxId: 9606]} | 87.11 | |
| d2f1ka2 | 165 | Prephenate dehydrogenase TyrA {Synechocystis sp. p | 86.91 | |
| d2fzwa2 | 176 | Alcohol dehydrogenase {Human (Homo sapiens), diffe | 86.48 | |
| d1nvmb1 | 157 | Acetaldehyde dehydrogenase (acylating) {Pseudomona | 86.45 | |
| d1diha1 | 162 | Dihydrodipicolinate reductase {Escherichia coli [T | 86.4 | |
| d2g5ca2 | 171 | Prephenate dehydrogenase TyrA {Aquifex aeolicus [T | 86.09 | |
| d2csua1 | 129 | Acetate-CoA ligase alpha chain, AcdA, N-terminal d | 85.69 | |
| d1bg6a2 | 184 | N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {A | 85.59 | |
| d1j4aa1 | 197 | D-lactate dehydrogenase {Lactobacillus helveticus | 85.25 | |
| d1sc6a1 | 188 | Phosphoglycerate dehydrogenase {Escherichia coli [ | 85.04 | |
| d1e3ia2 | 174 | Alcohol dehydrogenase {Mouse (Mus musculus), class | 84.92 | |
| d1f06a1 | 170 | Diaminopimelic acid dehydrogenase (DAPDH) {Coryneb | 84.69 | |
| d1kyqa1 | 150 | Bifunctional dehydrogenase/ferrochelatase Met8p, N | 84.27 | |
| d1mx3a1 | 193 | Transcription corepressor CtbP {Human (Homo sapien | 83.01 | |
| d1d7ya2 | 121 | NADH-dependent ferredoxin reductase, BphA4 {Pseudo | 82.95 | |
| d1q0qa2 | 151 | 1-deoxy-D-xylulose-5-phosphate reductoisomerase {E | 82.8 | |
| d2naca1 | 188 | Formate dehydrogenase {Pseudomonas sp., strain 101 | 82.77 | |
| d1npya1 | 167 | Shikimate 5-dehydrogenase-like protein HI0607 {Hae | 82.42 | |
| d1qp8a1 | 181 | Putative formate dehydrogenase {Archaeon Pyrobacul | 82.32 | |
| d1wdka3 | 186 | Fatty oxidation complex alpha subunit, middle doma | 82.1 | |
| d1mv8a2 | 202 | GDP-mannose 6-dehydrogenase {Pseudomonas aeruginos | 81.71 | |
| d1d1ta2 | 176 | Alcohol dehydrogenase {Human (Homo sapiens), diffe | 81.01 | |
| d1llua2 | 166 | Alcohol dehydrogenase {Pseudomonas aeruginosa [Tax | 80.71 | |
| d1dxya1 | 199 | D-2-hydroxyisocaproate dehydrogenase {Lactobacillu | 80.67 | |
| d1yl7a1 | 135 | Dihydrodipicolinate reductase {Mycobacterium tuber | 80.5 | |
| d2fy8a1 | 129 | Potassium channel-related protein MthK {Archaeon M | 80.21 | |
| d1yova1 | 529 | Amyloid beta precursor protein-binding protein 1, | 80.09 |
| >d1db3a_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Escherichia coli [TaxId: 562]
Probab=99.98 E-value=9.1e-32 Score=274.23 Aligned_cols=254 Identities=15% Similarity=0.110 Sum_probs=178.2
Q ss_pred CEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEEec
Q 010075 13 KTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVPG 92 (519)
Q Consensus 13 k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v~g 92 (519)
|.|||||||||||++|+++|++.| ++|+++.|...... .+++. .+ ..+ ......+++++.|
T Consensus 2 K~vLITGatGfiGs~lv~~Ll~~g---~~V~~~~r~~~~~~-~~~~~-~~---------~~~-----~~~~~~~~~~~~~ 62 (357)
T d1db3a_ 2 KVALITGVTGQDGSYLAEFLLEKG---YEVHGIKRRASSFN-TERVD-HI---------YQD-----PHTCNPKFHLHYG 62 (357)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTT---CEEEEECC-------------------------------------CCEEECCC
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCc---CEEEEEECCCcccc-hhhHH-HH---------Hhh-----hhhcCCCeEEEEe
Confidence 789999999999999999999998 67899998653211 11111 00 000 0112368999999
Q ss_pred cCCCCCCCCChhhhHHHHhc--CccEEEEcCccCCc---cccHHHHHHHhHHHHHHHHHHHHhc--cCCceEEEEeccee
Q 010075 93 DISSEDLGLKDSNLKEELWN--ELDIMVNSAAITKF---DERYDVAFGINTLGVIHLVNFAKKC--VKLKVFVHVSTAYV 165 (519)
Q Consensus 93 Dl~~~~lgls~~~~~~~l~~--~vdiViH~Aa~v~f---~~~~~~~~~~Nv~gt~~ll~~a~~~--~~l~~~V~vSTa~v 165 (519)
|+++ .+..+.+++ ++|+|||+||..+. .++....+++|+.||.+||++|++. ++.++|||+||+.|
T Consensus 63 Dl~d-------~~~~~~~~~~~~~d~v~h~aa~~~~~~~~~~~~~~~~~Nv~gt~nllea~~~~~~~~~~r~i~~SS~~v 135 (357)
T d1db3a_ 63 DLSD-------TSNLTRILREVQPDEVYNLGAMSHVAVSFESPEYTADVDAMGTLRLLEAIRFLGLEKKTRFYQASTSEL 135 (357)
T ss_dssp CSSC-------HHHHHHHHHHHCCSEEEECCCCCTTTTTTSCHHHHHHHHTHHHHHHHHHHHHTTCTTTCEEEEEEEGGG
T ss_pred ecCC-------HHHHHHHHhccCCCEEEEeecccccchhhhCHHHHHHHHHHHHHHHHHHHHHhCCCCCcEEEEEEchhh
Confidence 9994 444456665 56999999998654 3566778999999999999999886 24457999999999
Q ss_pred ecCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcHHHHHHHHHHHHHHHh
Q 010075 166 AGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLMQQS 245 (519)
Q Consensus 166 ~~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~Y~~sK~~aE~lv~~~ 245 (519)
||... +.+++|+.+. .|.+.|+.||+++|.+++.+
T Consensus 136 YG~~~----~~~~~E~~~~-----------------------------------------~P~~~Y~~sK~~~E~~~~~~ 170 (357)
T d1db3a_ 136 YGLVQ----EIPQKETTPF-----------------------------------------YPRSPYAVAKLYAYWITVNY 170 (357)
T ss_dssp GTTCC----SSSBCTTSCC-----------------------------------------CCCSHHHHHHHHHHHHHHHH
T ss_pred hCCCC----CCCcCCCCCC-----------------------------------------CCCChHHHHHHHHHHHHHHH
Confidence 98643 2233333332 45689999999999999987
Q ss_pred --hcCCcEEEEecCccccCCCCCCCcccccccccHHHHHHhhcCCc-eeeccCCCceeeeeeHHHHHHHHHHHHHHhccC
Q 010075 246 --KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNL-RCLVGETKVIMDVIPVDMVVNAMIVAMVAHAKQ 322 (519)
Q Consensus 246 --~~~lp~~IvRPs~V~g~~~~p~~gw~~~~~~~~~~i~~~~~g~~-~~~~~~~~~~~d~vpVDdva~aii~a~~~~~~~ 322 (519)
..+++++++||+.|||+...+. . ........+.....|.. ....|++++.+|++||+|+|++++.++...
T Consensus 171 ~~~~~l~~~ilR~~~vyGp~~~~~-~---~~~~i~~~~~~~~~~~~~~~~~g~~~~~r~~~~v~D~~~a~~~~~~~~--- 243 (357)
T d1db3a_ 171 RESYGMYACNGILFNHESPRRGET-F---VTRKITRAIANIAQGLESCLYLGNMDSLRDWGHAKDYVKMQWMMLQQE--- 243 (357)
T ss_dssp HHHHCCCEEEEEECCEECTTSCTT-S---HHHHHHHHHHHHHTTSCCCEEESCTTCEECCEEHHHHHHHHHHTTSSS---
T ss_pred HHHhCCCEEEEEeccccCCCCCcC-C---CchHHHHHHHHHHhCCCceEEECCCCeeecceeechHHHHHHHHHhCC---
Confidence 4589999999999999865321 0 11223344445555544 445689999999999999999999887531
Q ss_pred CCCCcEEEecCCCCCchhHHHHHH
Q 010075 323 PSDANIYHVGSSLRNPVTLGLQVA 346 (519)
Q Consensus 323 ~~~~~iyni~s~~~~~i~~~~~~~ 346 (519)
.+++||+++|...++..+...+
T Consensus 244 --~~~~yni~sg~~~s~~~~~~~~ 265 (357)
T d1db3a_ 244 --QPEDFVIATGVQYSVRQFVEMA 265 (357)
T ss_dssp --SCCCEEECCCCCEEHHHHHHHH
T ss_pred --CCCeEEECCCCceehHHHHHHH
Confidence 2578999999776654444443
|
| >d2b69a1 c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: UDP-glucuronate decarboxylase 1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.97 E-value=1.5e-31 Score=267.55 Aligned_cols=245 Identities=16% Similarity=0.169 Sum_probs=182.4
Q ss_pred CCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEEe
Q 010075 12 NKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVP 91 (519)
Q Consensus 12 ~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v~ 91 (519)
.|+|||||||||||++|+++|++.| .+|+++.|...+... .+. . .....++....
T Consensus 1 kKKIlVtG~sGfiG~~lv~~L~~~g---~~V~~~d~~~~~~~~--~~~--------------~------~~~~~~~d~~~ 55 (312)
T d2b69a1 1 RKRILITGGAGFVGSHLTDKLMMDG---HEVTVVDNFFTGRKR--NVE--------------H------WIGHENFELIN 55 (312)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTT---CEEEEEECCSSCCGG--GTG--------------G------GTTCTTEEEEE
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCc---CEEEEEeCCCcCCHH--HHH--------------H------hcCCCceEEEe
Confidence 3799999999999999999999998 567888764322110 000 0 00124566777
Q ss_pred ccCCCCCCCCChhhhHHHHhcCccEEEEcCccCCc---cccHHHHHHHhHHHHHHHHHHHHhccCCceEEEEecceeecC
Q 010075 92 GDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF---DERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAYVAGE 168 (519)
Q Consensus 92 gDl~~~~lgls~~~~~~~l~~~vdiViH~Aa~v~f---~~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V~vSTa~v~~~ 168 (519)
+|+.+ .+..++|+|||+||.++. ..+....+++|+.|+.+|+++|++. +. +|||+||..||+.
T Consensus 56 ~~~~~------------~~~~~~d~VihlAa~~~~~~~~~~~~~~~~~Nv~g~~~ll~~~~~~-~~-k~I~~SS~~vy~~ 121 (312)
T d2b69a1 56 HDVVE------------PLYIEVDQIYHLASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRV-GA-RLLLASTSEVYGD 121 (312)
T ss_dssp CCTTS------------CCCCCCSEEEECCSCCSHHHHTTCHHHHHHHHHHHHHHHHHHHHHH-TC-EEEEEEEGGGGBS
T ss_pred hHHHH------------HHHcCCCEEEECcccCCchhHHhCHHHHHHHHHHHHHHHHHHHHHc-CC-cEEEEEChheecC
Confidence 77653 233579999999998764 3466778999999999999999986 54 7999999999986
Q ss_pred cC-CeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcHHHHHHHHHHHHHHHh--
Q 010075 169 RT-GLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLMQQS-- 245 (519)
Q Consensus 169 ~~-~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~Y~~sK~~aE~lv~~~-- 245 (519)
.. ..++|..+.+..+. .|.+.|+.||.++|.++..+
T Consensus 122 ~~~~~~~e~~~~~~~~~-----------------------------------------~p~~~Y~~sK~~~E~~~~~~~~ 160 (312)
T d2b69a1 122 PEVHPQSEDYWGHVNPI-----------------------------------------GPRACYDEGKRVAETMCYAYMK 160 (312)
T ss_dssp CSSSSBCTTCCCBCCSS-----------------------------------------STTHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCCCccccCCCCCC-----------------------------------------CCccHHHHHHHHHHHHHHHHHH
Confidence 43 24555544433322 45678999999999999887
Q ss_pred hcCCcEEEEecCccccCCCCCCCcccccccccHHHHHHhhcCCceeeccCCCceeeeeeHHHHHHHHHHHHHHhccCCCC
Q 010075 246 KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMIVAMVAHAKQPSD 325 (519)
Q Consensus 246 ~~~lp~~IvRPs~V~g~~~~p~~gw~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~d~vpVDdva~aii~a~~~~~~~~~~ 325 (519)
..+++++++||+.|||+...+-. ...+..++..+..|....+++++.+.+|++||+|++++++.++... .
T Consensus 161 ~~~~~~~~lR~~~vyGp~~~~~~-----~~~i~~~i~~~~~g~~i~i~~~g~~~r~~i~v~D~~~~~~~~~~~~-----~ 230 (312)
T d2b69a1 161 QEGVEVRVARIFNTFGPRMHMND-----GRVVSNFILQALQGEPLTVYGSGSQTRAFQYVSDLVNGLVALMNSN-----V 230 (312)
T ss_dssp HHCCCEEEEEECCEECTTCCTTC-----CCHHHHHHHHHHHTCCEEEESSSCCEEECEEHHHHHHHHHHHHTSS-----C
T ss_pred HhCCcEEEEEeeeEECCCCCCCC-----ccHHHHHHHHHHcCCCeEEeCCCCeeEccEEHHHHHHHHHHHHhhc-----c
Confidence 45899999999999998764321 1234567778888988888999999999999999999998887422 2
Q ss_pred CcEEEecCCCCCchhHHHHHH
Q 010075 326 ANIYHVGSSLRNPVTLGLQVA 346 (519)
Q Consensus 326 ~~iyni~s~~~~~i~~~~~~~ 346 (519)
..+||++++...++..+...+
T Consensus 231 ~~~~n~~~~~~~~~~~~~~~i 251 (312)
T d2b69a1 231 SSPVNLGNPEEHTILEFAQLI 251 (312)
T ss_dssp CSCEEESCCCEEEHHHHHHHH
T ss_pred CCceEecCCcccchhhHHHHH
Confidence 468999999776655544443
|
| >d1r6da_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces venezuelae [TaxId: 54571]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: dTDP-glucose 4,6-dehydratase (RmlB) species: Streptomyces venezuelae [TaxId: 54571]
Probab=99.97 E-value=2.5e-30 Score=259.45 Aligned_cols=243 Identities=21% Similarity=0.263 Sum_probs=185.5
Q ss_pred CEEEEeCCccHHHHHHHHHHHHhCCCcc---EEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 010075 13 KTILVSGVTGFVAKVFIEKILRVQPNVK---KLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (519)
Q Consensus 13 k~VlITGaTGFlG~~Lv~~LL~~g~~v~---~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (519)
|+|||||||||||++|+++|++.|+.|. +|+.+.+........ ++. ......++.+
T Consensus 1 MkIlItG~tGfIG~~l~~~L~~~g~~v~~~~~i~~~d~~~~~~~~~-~~~--------------------~~~~~~~~~~ 59 (322)
T d1r6da_ 1 MRLLVTGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSLTYAGNRA-NLA--------------------PVDADPRLRF 59 (322)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTSCTTSCCSEEEEEECCCTTCCGG-GGG--------------------GGTTCTTEEE
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCCccCCceEEEEeCCCccccHh-Hhh--------------------hhhcCCCeEE
Confidence 6899999999999999999999987653 556554432221110 000 0011367999
Q ss_pred EeccCCCCCCCCChhhhHHHHhcCccEEEEcCccCCc---cccHHHHHHHhHHHHHHHHHHHHhccCCceEEEEecceee
Q 010075 90 VPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF---DERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAYVA 166 (519)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~~~vdiViH~Aa~v~f---~~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V~vSTa~v~ 166 (519)
+.+|+.+ ..........+|+|+|+|+.... .......+++|+.||.+++++|.+. ++++|||+||+.+|
T Consensus 60 ~~~d~~~-------~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~N~~gt~~ll~~~~~~-~~~~~I~~Ss~~~y 131 (322)
T d1r6da_ 60 VHGDIRD-------AGLLARELRGVDAIVHFAAESHVDRSIAGASVFTETNVQGTQTLLQCAVDA-GVGRVVHVSTNQVY 131 (322)
T ss_dssp EECCTTC-------HHHHHHHTTTCCEEEECCSCCCHHHHHHCCHHHHHHHTHHHHHHHHHHHHT-TCCEEEEEEEGGGG
T ss_pred EEecccc-------chhhhccccccceEEeecccccccccccchHHHhhhhHHHHHHHHHHHHHc-CCceEEEeecceee
Confidence 9999994 44444667789999999987654 2456677899999999999999986 78999999999999
Q ss_pred cCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcHHHHHHHHHHHHHHHh-
Q 010075 167 GERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLMQQS- 245 (519)
Q Consensus 167 ~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~Y~~sK~~aE~lv~~~- 245 (519)
|... +.+++|+.+. .|.+.|+.||..+|.+++.+
T Consensus 132 g~~~----~~~~~E~~~~-----------------------------------------~p~~~Y~~sK~~~E~~~~~~~ 166 (322)
T d1r6da_ 132 GSID----SGSWTESSPL-----------------------------------------EPNSPYAASKAGSDLVARAYH 166 (322)
T ss_dssp CCCS----SSCBCTTSCC-----------------------------------------CCCSHHHHHHHHHHHHHHHHH
T ss_pred cCCC----CCCCCCCCCC-----------------------------------------CCCCHHHHHHHHHHHHHHHHH
Confidence 8653 2233333332 45679999999999999987
Q ss_pred -hcCCcEEEEecCccccCCCCCCCcccccccccHHHHHHhhcCCceeeccCCCceeeeeeHHHHHHHHHHHHHHhccCCC
Q 010075 246 -KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMIVAMVAHAKQPS 324 (519)
Q Consensus 246 -~~~lp~~IvRPs~V~g~~~~p~~gw~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~d~vpVDdva~aii~a~~~~~~~~~ 324 (519)
..+++++++||+.|||+...+ + ..+..++..+..|....++++|++.+|++||+|+|++++.++.+..
T Consensus 167 ~~~~~~~~~lR~~~vyGp~~~~-----~--~~i~~~i~~~~~~~~i~v~~~g~~~r~~i~v~D~a~ai~~~~~~~~---- 235 (322)
T d1r6da_ 167 RTYGLDVRITRCCNNYGPYQHP-----E--KLIPLFVTNLLDGGTLPLYGDGANVREWVHTDDHCRGIALVLAGGR---- 235 (322)
T ss_dssp HHHCCCEEEEEECEEECTTCCT-----T--SHHHHHHHHHHTTCCEEEETTSCCEEEEEEHHHHHHHHHHHHHHCC----
T ss_pred HHhCCCEEEEEeeeEECcCCCc-----C--cHHHHHHHHHHcCCCcEEecCCCeEEccEEHHHHHHHHHHHHhCCC----
Confidence 558999999999999987532 1 2355677788888888888999999999999999999999997543
Q ss_pred CCcEEEecCCCCCchh
Q 010075 325 DANIYHVGSSLRNPVT 340 (519)
Q Consensus 325 ~~~iyni~s~~~~~i~ 340 (519)
.+++||++++...++.
T Consensus 236 ~~~~~ni~~~~~~s~~ 251 (322)
T d1r6da_ 236 AGEIYHIGGGLELTNR 251 (322)
T ss_dssp TTCEEEECCCCEEEHH
T ss_pred CCCeeEEeecccchhH
Confidence 2579999999666543
|
| >d1kewa_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: dTDP-glucose 4,6-dehydratase (RmlB) species: Streptococcus suis, serotype 2 [TaxId: 1307]
Probab=99.97 E-value=6.8e-31 Score=268.18 Aligned_cols=256 Identities=18% Similarity=0.218 Sum_probs=183.1
Q ss_pred CEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEEec
Q 010075 13 KTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVPG 92 (519)
Q Consensus 13 k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v~g 92 (519)
|+|||||||||||++|+++|++.+++ .|+++.+...... .+++. . -....+++++.+
T Consensus 1 MkILItG~tGfIGs~l~~~L~~~g~~--vv~~~d~~~~~~~-~~~~~-------------~-------~~~~~~~~~~~~ 57 (361)
T d1kewa_ 1 MKILITGGAGFIGSAVVRHIIKNTQD--TVVNIDKLTYAGN-LESLS-------------D-------ISESNRYNFEHA 57 (361)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHHCSC--EEEEEECCCTTCC-GGGGT-------------T-------TTTCTTEEEEEC
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCC--EEEEEeCCCcccc-HHHHH-------------h-------hhhcCCcEEEEc
Confidence 68999999999999999999999853 2444443222211 11111 0 001368999999
Q ss_pred cCCCCCCCCChhhhHHHHhc--CccEEEEcCccCCcc---ccHHHHHHHhHHHHHHHHHHHHhcc--------CCceEEE
Q 010075 93 DISSEDLGLKDSNLKEELWN--ELDIMVNSAAITKFD---ERYDVAFGINTLGVIHLVNFAKKCV--------KLKVFVH 159 (519)
Q Consensus 93 Dl~~~~lgls~~~~~~~l~~--~vdiViH~Aa~v~f~---~~~~~~~~~Nv~gt~~ll~~a~~~~--------~l~~~V~ 159 (519)
|+++ .+....+++ ++|+|||+||..+.. ++....+++|+.||.+++++|++.. +.++|||
T Consensus 58 Dl~d-------~~~l~~~~~~~~~d~VihlAa~~~~~~~~~~p~~~~~~N~~gt~nl~~~~~~~~~~~~~~~~~~~~~i~ 130 (361)
T d1kewa_ 58 DICD-------SAEITRIFEQYQPDAVMHLAAESHVDRSITGPAAFIETNIVGTYALLEVARKYWSALGEDKKNNFRFHH 130 (361)
T ss_dssp CTTC-------HHHHHHHHHHHCCSEEEECCSCCCHHHHHHCTHHHHHHHTHHHHHHHHHHHHHHHTSCHHHHHHCEEEE
T ss_pred cCCC-------HHHHHHHHHhCCCCEEEECccccchhhHHhCHHHHHHHHHHHHHHHHHHHHHhhhhhhhcccCceEEEE
Confidence 9995 333345544 689999999986543 3456779999999999999998752 3468999
Q ss_pred EecceeecCcCCe-eecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcHHHHHHHHH
Q 010075 160 VSTAYVAGERTGL-ILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMG 238 (519)
Q Consensus 160 vSTa~v~~~~~~~-i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~Y~~sK~~a 238 (519)
+||..+||..... ..|.... .+... ......|.+.|+.||.++
T Consensus 131 ~SS~~vyg~~~~~~~~~~~~~--~~~~~----------------------------------e~~~~~p~s~Yg~sK~~~ 174 (361)
T d1kewa_ 131 ISTDEVYGDLPHPDEVENSVT--LPLFT----------------------------------ETTAYAPSSPYSASKASS 174 (361)
T ss_dssp EEEGGGGCCCCCGGGSCTTSC--CCCBC----------------------------------TTSCCCCCSHHHHHHHHH
T ss_pred eccceeeCCCccCCccccccC--CCCcc----------------------------------cCCCCCCCCHHHHHHHHH
Confidence 9999999975421 1122111 01000 001125678899999999
Q ss_pred HHHHHHh--hcCCcEEEEecCccccCCCCCCCcccccccccHHHHHHhhcCCceeeccCCCceeeeeeHHHHHHHHHHHH
Q 010075 239 EMLMQQS--KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMIVAM 316 (519)
Q Consensus 239 E~lv~~~--~~~lp~~IvRPs~V~g~~~~p~~gw~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~d~vpVDdva~aii~a~ 316 (519)
|.+++.+ ..+++++++||+.|||+...+ + ..+..++..+..|....++++|++.+||+||+|+|++++.++
T Consensus 175 E~~~~~~~~~~~i~~~~lR~~~vyGp~~~~-----~--~~i~~~i~~~~~g~~~~v~g~g~~~r~~i~v~D~a~ai~~~~ 247 (361)
T d1kewa_ 175 DHLVRAWRRTYGLPTIVTNCSNNYGPYHFP-----E--KLIPLVILNALEGKPLPIYGKGDQIRDWLYVEDHARALHMVV 247 (361)
T ss_dssp HHHHHHHHHHHCCCEEEEEECEEESTTCCT-----T--SHHHHHHHHHHHTCCEEEETTSCCEEEEEEHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCEEEEecCceECcCCCc-----C--cHHHHHHHHHHcCCCcEEeCCCCeEEeCEEHHHHHHHHHHHH
Confidence 9999987 458999999999999986532 1 234567778888988888899999999999999999999999
Q ss_pred HHhccCCCCCcEEEecCCCCCchhHHHHH
Q 010075 317 VAHAKQPSDANIYHVGSSLRNPVTLGLQV 345 (519)
Q Consensus 317 ~~~~~~~~~~~iyni~s~~~~~i~~~~~~ 345 (519)
..... +++||++++...++..+...
T Consensus 248 ~~~~~----~~~~Ni~s~~~~s~~~~~~~ 272 (361)
T d1kewa_ 248 TEGKA----GETYNIGGHNEKKNLDVVFT 272 (361)
T ss_dssp HHCCT----TCEEEECCCCEEEHHHHHHH
T ss_pred hcCCC----CCeEEECCCCCcchHHHHhH
Confidence 75432 57999999866664443333
|
| >d1sb8a_ c.2.1.2 (A:) UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: UDP-N-acetylglucosamine 4-epimerase WbpP species: Pseudomonas aeruginosa [TaxId: 287]
Probab=99.97 E-value=1.9e-29 Score=254.94 Aligned_cols=256 Identities=18% Similarity=0.203 Sum_probs=192.0
Q ss_pred CCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCccc-HHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 010075 11 ENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDS-AALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (519)
Q Consensus 11 ~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~-~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (519)
..|+|||||||||||++|+++|++.| ++|+++.|...+.. ...++. .... .....++.+
T Consensus 15 ~~k~iLVTG~tGfIGs~lv~~L~~~g---~~V~~~d~~~~~~~~~~~~~~-------------~~~~----~~~~~~~~~ 74 (341)
T d1sb8a_ 15 QPKVWLITGVAGFIGSNLLETLLKLD---QKVVGLDNFATGHQRNLDEVR-------------SLVS----EKQWSNFKF 74 (341)
T ss_dssp SCCEEEEETTTSHHHHHHHHHHHHTT---CEEEEEECCSSCCHHHHHHHH-------------HHSC----HHHHTTEEE
T ss_pred CCCEEEEecCCCHHHHHHHHHHHHCc---CEEEEEECCCCcchhhHHHHH-------------Hhhh----hcccCCeeE
Confidence 45899999999999999999999999 67899987554332 122221 1100 001267899
Q ss_pred EeccCCCCCCCCChhhhHHHHhcCccEEEEcCccCCc---cccHHHHHHHhHHHHHHHHHHHHhccCCceEEEEecceee
Q 010075 90 VPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF---DERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAYVA 166 (519)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~~~vdiViH~Aa~v~f---~~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V~vSTa~v~ 166 (519)
+.+|+.+ ...........+.|+|+|+.... .++....+++|+.||.+++++|++. ++++|||+||+.+|
T Consensus 75 ~~~d~~d-------~~~~~~~~~~~~~v~~~~a~~~~~~~~~~~~~~~~~Nv~gt~~ll~~~~~~-~~~~~i~~SS~~vy 146 (341)
T d1sb8a_ 75 IQGDIRN-------LDDCNNACAGVDYVLHQAALGSVPRSINDPITSNATNIDGFLNMLIAARDA-KVQSFTYAASSSTY 146 (341)
T ss_dssp EECCTTS-------HHHHHHHHTTCSEEEECCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHT-TCSEEEEEEEGGGG
T ss_pred Eeecccc-------ccccccccccccccccccccccccccccCccchhheeehhHHHHHHHHHhc-CCceEEEcccceee
Confidence 9999994 44445667789999999997653 3566778999999999999999997 78999999999999
Q ss_pred cCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcHHHHHHHHHHHHHHHh-
Q 010075 167 GERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLMQQS- 245 (519)
Q Consensus 167 ~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~Y~~sK~~aE~lv~~~- 245 (519)
|.... .++.|+.+. .|.+.|+.||.++|+++..+
T Consensus 147 g~~~~----~~~~E~~~~-----------------------------------------~p~~~Y~~sK~~~E~~~~~~~ 181 (341)
T d1sb8a_ 147 GDHPG----LPKVEDTIG-----------------------------------------KPLSPYAVTKYVNELYADVFS 181 (341)
T ss_dssp TTCCC----SSBCTTCCC-----------------------------------------CCCSHHHHHHHHHHHHHHHHH
T ss_pred CCCCC----CCccCCCCC-----------------------------------------CCCCcchHHHHHHHHHHHHHH
Confidence 86542 223332222 46789999999999999877
Q ss_pred -hcCCcEEEEecCccccCCCCCCCcccccccccHHHHHHhhcCCceeeccCCCceeeeeeHHHHHHHHHHHHHHhccCCC
Q 010075 246 -KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMIVAMVAHAKQPS 324 (519)
Q Consensus 246 -~~~lp~~IvRPs~V~g~~~~p~~gw~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~d~vpVDdva~aii~a~~~~~~~~~ 324 (519)
..+++++|+||+.|||+...|-..+ . ..+..++..+..|....+.++|.+.+|++||+|+|.++..++......
T Consensus 182 ~~~~i~~~ilR~~~v~G~~~~~~~~~-~--~~i~~~~~~~~~g~~i~~~g~g~~~r~~i~v~D~~~a~~~~~~~~~~~-- 256 (341)
T d1sb8a_ 182 RCYGFSTIGLRYFNVFGRRQDPNGAY-A--AVIPKWTSSMIQGDDVYINGDGETSRDFCYIENTVQANLLAATAGLDA-- 256 (341)
T ss_dssp HHHCCCCEEEEECCEECTTCCCCSTT-C--CHHHHHHHHHHHTCCCEEESSSCCEECCEEHHHHHHHHHHHHTCCGGG--
T ss_pred HHhCCCeEEEEeceeeccCcCCCCch-h--hhHHHHHHHHHcCCceEEcCCCCEEEEEEEEeccchhhhhhhhccccc--
Confidence 5589999999999999987653221 1 233456677788888888899999999999999999999888643322
Q ss_pred CCcEEEecCCCCCchhHHHH
Q 010075 325 DANIYHVGSSLRNPVTLGLQ 344 (519)
Q Consensus 325 ~~~iyni~s~~~~~i~~~~~ 344 (519)
.+++||++++...++..+..
T Consensus 257 ~~~~~~~~~~~~~si~~i~~ 276 (341)
T d1sb8a_ 257 RNQVYNIAVGGRTSLNQLFF 276 (341)
T ss_dssp CSEEEEESCSCCEEHHHHHH
T ss_pred cceeeeecccccchHHHHHH
Confidence 36799999986666444333
|
| >d1udca_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) species: Escherichia coli [TaxId: 562]
Probab=99.97 E-value=1.3e-28 Score=248.66 Aligned_cols=255 Identities=19% Similarity=0.260 Sum_probs=178.7
Q ss_pred CEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcc-cHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEEe
Q 010075 13 KTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADID-SAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVP 91 (519)
Q Consensus 13 k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~-~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v~ 91 (519)
|+|||||||||||++|++.|++.| .+|+++.|...+. .....+. . ...+++.+++
T Consensus 1 MKiLItG~tGfIG~~l~~~L~~~g---~~V~~~d~~~~~~~~~~~~~~-------------~--------~~~~~~~~~~ 56 (338)
T d1udca_ 1 MRVLVTGGSGYIGSHTCVQLLQNG---HDVIILDNLCNSKRSVLPVIE-------------R--------LGGKHPTFVE 56 (338)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTT---CEEEEEECCSSCCTTHHHHHH-------------H--------HHTSCCEEEE
T ss_pred CEEEEECCCCHHHHHHHHHHHHCc---CEEEEEECCCCcchhhHHHHH-------------h--------hcCCCCEEEE
Confidence 679999999999999999999998 5778887744332 1111111 0 0136799999
Q ss_pred ccCCCCCCCCChhhhHHHHhc--CccEEEEcCccCCcc---ccHHHHHHHhHHHHHHHHHHHHhccCCceEEEEecceee
Q 010075 92 GDISSEDLGLKDSNLKEELWN--ELDIMVNSAAITKFD---ERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAYVA 166 (519)
Q Consensus 92 gDl~~~~lgls~~~~~~~l~~--~vdiViH~Aa~v~f~---~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V~vSTa~v~ 166 (519)
+|+++ .+....+++ ++|+|||+||..... ++....+++|+.||.++|++|++. ++++|||+||..+|
T Consensus 57 ~Dl~d-------~~~l~~~~~~~~~d~ViHlAa~~~~~~~~~~~~~~~~~Nv~gt~nlL~~~~~~-~v~~~i~~Ss~~vy 128 (338)
T d1udca_ 57 GDIRN-------EALMTEILHDHAIDTVIHFAGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAA-NVKNFIFSSSATVY 128 (338)
T ss_dssp CCTTC-------HHHHHHHHHHTTCSEEEECCSCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHH-TCCEEEEEEEGGGG
T ss_pred eecCC-------HHHHHHHHhccCCCEEEECCCccchhhHHhCHHHHHHhHHHHHHHHHHHHHHh-CCCEEEecCcceEE
Confidence 99995 344445555 799999999987543 456788999999999999999997 89999999999999
Q ss_pred cCcCC-eeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcHHHHHHHHHHHHHHHh
Q 010075 167 GERTG-LILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLMQQS 245 (519)
Q Consensus 167 ~~~~~-~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~Y~~sK~~aE~lv~~~ 245 (519)
+.... ...|. .+ ...+.+.|+.+|..+|.++.++
T Consensus 129 ~~~~~~~~~e~-----~~----------------------------------------~~~p~~~Y~~sK~~~e~~~~~~ 163 (338)
T d1udca_ 129 GDQPKIPYVES-----FP----------------------------------------TGTPQSPYGKSKLMVEQILTDL 163 (338)
T ss_dssp CSCCSSSBCTT-----SC----------------------------------------CCCCSSHHHHHHHHHHHHHHHH
T ss_pred ccccccccccc-----cc----------------------------------------cCCCcchHHHHHhhhhHHHHHH
Confidence 76432 11111 10 1156789999999999999865
Q ss_pred ---hcCCcEEEEecCccccCCCCCCCccccc--ccccHHHHHHh--hcCCceeecc------CCCceeeeeeHHHHHHHH
Q 010075 246 ---KENLSLVIIRPTVVSGTYKEPFPGWVED--LKTINTLFVAS--AQGNLRCLVG------ETKVIMDVIPVDMVVNAM 312 (519)
Q Consensus 246 ---~~~lp~~IvRPs~V~g~~~~p~~gw~~~--~~~~~~~i~~~--~~g~~~~~~~------~~~~~~d~vpVDdva~ai 312 (519)
..+++++++||+.|||+...+.-|.... .+.....+... ..+....+.| ++...+||++|+|++.++
T Consensus 164 ~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~i~i~g~~~~~~~g~~~rd~i~v~D~~~~~ 243 (338)
T d1udca_ 164 QKAQPDWSIALLRYFNPVGAHPSGDMGEDPQGIPNNLMPYIAQVAVGRRDSLAIFGNDYPTEDGTGVRDYIHVMDLADGH 243 (338)
T ss_dssp HHHSTTCEEEEEEECEEECCCTTSSSCCCCCSSCCSHHHHHHHHHTTSSSCEEEECSCSSSTTSSCEECEEEHHHHHHHH
T ss_pred HhhccCCeEEEEeeccEEeccCCCCCCCCccccHHHHHHHHHHHHhcCCCCEEEeCCCcccCCCCceeeEEEEeehhhhc
Confidence 3589999999999999876433221110 11222233222 2233444444 477889999999999998
Q ss_pred HHHHHHhccCCCCCcEEEecCCCCCchhHHHHH
Q 010075 313 IVAMVAHAKQPSDANIYHVGSSLRNPVTLGLQV 345 (519)
Q Consensus 313 i~a~~~~~~~~~~~~iyni~s~~~~~i~~~~~~ 345 (519)
..+........ .+++||++++...++..+...
T Consensus 244 ~~~~~~~~~~~-~~~i~Ni~~~~~~si~e~~~~ 275 (338)
T d1udca_ 244 VVAMEKLANKP-GVHIYNLGAGVGNSVLDVVNA 275 (338)
T ss_dssp HHHHHHHTTCC-EEEEEEESCSSCEEHHHHHHH
T ss_pred ccccccccccc-CcceeeecCCCCCcHHHHHHH
Confidence 88887544332 368999999876664443333
|
| >d2blla1 c.2.1.2 (A:316-657) Polymyxin resistance protein ArnA (PrmI) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Polymyxin resistance protein ArnA (PrmI) species: Escherichia coli [TaxId: 562]
Probab=99.96 E-value=9e-29 Score=249.73 Aligned_cols=249 Identities=18% Similarity=0.230 Sum_probs=183.0
Q ss_pred CEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEEec
Q 010075 13 KTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVPG 92 (519)
Q Consensus 13 k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v~g 92 (519)
|+|||||||||||++|+++|++.++ .+|+++.+.+..... + .-..+++++.|
T Consensus 1 MKILITG~tGfiG~~l~~~Ll~~g~--~~V~~ld~~~~~~~~---~-----------------------~~~~~~~~i~~ 52 (342)
T d2blla1 1 MRVLILGVNGFIGNHLTERLLREDH--YEVYGLDIGSDAISR---F-----------------------LNHPHFHFVEG 52 (342)
T ss_dssp CEEEEETCSSHHHHHHHHHHHHSTT--CEEEEEESCCGGGGG---G-----------------------TTCTTEEEEEC
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCC--CEEEEEeCCCcchhh---h-----------------------ccCCCeEEEEC
Confidence 6899999999999999999999873 478998776533211 0 01367999999
Q ss_pred cCCCCCCCCChhhhHHHHhcCccEEEEcCccCCcc---ccHHHHHHHhHHHHHHHHHHHHhccCCceEEEEecceeecCc
Q 010075 93 DISSEDLGLKDSNLKEELWNELDIMVNSAAITKFD---ERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAYVAGER 169 (519)
Q Consensus 93 Dl~~~~lgls~~~~~~~l~~~vdiViH~Aa~v~f~---~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V~vSTa~v~~~~ 169 (519)
|+++ ..+..+....++|+|||+||..... ......+.+|+.||.+++++|.+. +. +++++||+.+|+..
T Consensus 53 Di~~------~~~~~~~~~~~~d~Vih~a~~~~~~~~~~~~~~~~~~nv~gt~~ll~~~~~~-~~-~~~~~ss~~~~~~~ 124 (342)
T d2blla1 53 DISI------HSEWIEYHVKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKY-RK-RIIFPSTSEVYGMC 124 (342)
T ss_dssp CTTT------CSHHHHHHHHHCSEEEECBCCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHT-TC-EEEEECCGGGGBTC
T ss_pred ccCC------hHHHHHHHHhCCCccccccccccccccccCCccccccccccccccccccccc-cc-cccccccccccccc
Confidence 9986 3344444566899999999987643 345677999999999999999985 44 56789999998865
Q ss_pred CCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcHHHHHHHHHHHHHHHh--hc
Q 010075 170 TGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLMQQS--KE 247 (519)
Q Consensus 170 ~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~Y~~sK~~aE~lv~~~--~~ 247 (519)
.....+...+. .+. .....|.+.|+.||.++|+++..+ ..
T Consensus 125 ~~~~~~~~~~~-~~~-------------------------------------~~~~~p~~~Y~~sK~~~E~~~~~~~~~~ 166 (342)
T d2blla1 125 SDKYFDEDHSN-LIV-------------------------------------GPVNKPRWIYSVSKQLLDRVIWAYGEKE 166 (342)
T ss_dssp CCSSBCTTTCC-CBC-------------------------------------CCTTCGGGHHHHHHHHHHHHHHHHHHHH
T ss_pred ccccccccccc-ccc-------------------------------------cccCCCcchhhhcccchhhhhhhhhccc
Confidence 43211111110 000 011144578999999999999987 45
Q ss_pred CCcEEEEecCccccCCCCCCCc-ccccccccHHHHHHhhcCCceeeccCCCceeeeeeHHHHHHHHHHHHHHhccCCCCC
Q 010075 248 NLSLVIIRPTVVSGTYKEPFPG-WVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMIVAMVAHAKQPSDA 326 (519)
Q Consensus 248 ~lp~~IvRPs~V~g~~~~p~~g-w~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~d~vpVDdva~aii~a~~~~~~~~~~~ 326 (519)
+++++++||+.++|+...+..+ ..........++..+..|....++++++..++++||+|+|+++..++....... .+
T Consensus 167 ~~~~~i~r~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~r~~i~v~D~~~a~~~~~~~~~~~~-~g 245 (342)
T d2blla1 167 GLQFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLIDGGKQKRCFTDIRDGIEALYRIIENAGNRC-DG 245 (342)
T ss_dssp CCCEEEEEECSEECSSCCCTTCSBSCBCHHHHHHHHHHHHTCCEEEGGGSCCEEECEEHHHHHHHHHHHHHCGGGTT-TT
T ss_pred CceeEEeeccccccccccccccccccccccchHHHHHHHhCCCccccCCCCeeeeecccccccceeeeehhhccccC-CC
Confidence 8999999999999987644322 222223455677788889888899999999999999999999999997543322 37
Q ss_pred cEEEecCCCC
Q 010075 327 NIYHVGSSLR 336 (519)
Q Consensus 327 ~iyni~s~~~ 336 (519)
++||++++..
T Consensus 246 ~~~Nig~~~~ 255 (342)
T d2blla1 246 EIINIGNPEN 255 (342)
T ss_dssp EEEEECCTTS
T ss_pred eEEEEecccc
Confidence 8999987644
|
| >d2c5aa1 c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose-3', 5'-epimerase species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=99.96 E-value=1e-28 Score=251.51 Aligned_cols=252 Identities=15% Similarity=0.032 Sum_probs=185.5
Q ss_pred CCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEE
Q 010075 11 ENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFV 90 (519)
Q Consensus 11 ~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v 90 (519)
++|+|||||||||||++|+++|++.| ++|+++.|.+...... ......+.
T Consensus 14 ~nMKILVTGgsGfIGs~lv~~L~~~g---~~V~~~d~~~~~~~~~---------------------------~~~~~~~~ 63 (363)
T d2c5aa1 14 ENLKISITGAGGFIASHIARRLKHEG---HYVIASDWKKNEHMTE---------------------------DMFCDEFH 63 (363)
T ss_dssp SCCEEEEETTTSHHHHHHHHHHHHTT---CEEEEEESSCCSSSCG---------------------------GGTCSEEE
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCc---CEEEEEeCCCccchhh---------------------------hcccCcEE
Confidence 57899999999999999999999998 6778887765432110 02455788
Q ss_pred eccCCCCCCCCChhhhHHHHhcCccEEEEcCccCCc----cccHHHHHHHhHHHHHHHHHHHHhccCCceEEEEecceee
Q 010075 91 PGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF----DERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAYVA 166 (519)
Q Consensus 91 ~gDl~~~~lgls~~~~~~~l~~~vdiViH~Aa~v~f----~~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V~vSTa~v~ 166 (519)
.+|+.+ .+....+.+++|+|||+|+.... ..........|+.||.+++++|++. ++++|||+||+.++
T Consensus 64 ~~D~~~-------~~~~~~~~~~~d~Vih~a~~~~~~~~~~~~~~~~~~~n~~gt~~ll~~~~~~-~vk~~i~~SS~~~~ 135 (363)
T d2c5aa1 64 LVDLRV-------MENCLKVTEGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMIEAARIN-GIKRFFYASSACIY 135 (363)
T ss_dssp ECCTTS-------HHHHHHHHTTCSEEEECCCCCCCHHHHTTCHHHHHHHHHHHHHHHHHHHHHT-TCSEEEEEEEGGGS
T ss_pred Eeechh-------HHHHHHHhhcCCeEeecccccccccccccccccccccccchhhHHHHhHHhh-Cccccccccccccc
Confidence 899984 33334677899999999988765 4677888999999999999999996 89999999999999
Q ss_pred cCcCC-eeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcHHHHHHHHHHHHHHHh
Q 010075 167 GERTG-LILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLMQQS 245 (519)
Q Consensus 167 ~~~~~-~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~Y~~sK~~aE~lv~~~ 245 (519)
+.... ..+|..... ....+..|.+.|+.||.++|++++.+
T Consensus 136 ~~~~~~~~~~~~~~~---------------------------------------~e~~~~~p~~~Yg~sK~~~E~~~~~~ 176 (363)
T d2c5aa1 136 PEFKQLETTNVSLKE---------------------------------------SDAWPAEPQDAFGLEKLATEELCKHY 176 (363)
T ss_dssp CGGGSSSSSSCEECG---------------------------------------GGGSSBCCSSHHHHHHHHHHHHHHHH
T ss_pred ccccccccccccccc---------------------------------------ccCCcCCCCCHHHHHHHHHHHHHHHH
Confidence 86542 122221100 00012256789999999999999987
Q ss_pred --hcCCcEEEEecCccccCCCCCCCcccccccccHHHHHHhhcCCceeeccCCCceeeeeeHHHHHHHHHHHHHHhccCC
Q 010075 246 --KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMIVAMVAHAKQP 323 (519)
Q Consensus 246 --~~~lp~~IvRPs~V~g~~~~p~~gw~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~d~vpVDdva~aii~a~~~~~~~~ 323 (519)
..+++++++||+.|||+...+...+.. ............+......++|.+.+||+|++|+|++++.++...
T Consensus 177 ~~~~gl~~~ilR~~~vyG~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~g~g~~~rd~i~v~D~~~~~~~~~~~~---- 250 (363)
T d2c5aa1 177 NKDFGIECRIGRFHNIYGPFGTWKGGREK--APAAFCRKAQTSTDRFEMWGDGLQTRSFTFIDECVEGVLRLTKSD---- 250 (363)
T ss_dssp HHHHCCEEEEEEECCEECTTSCCSSSCCC--HHHHHHHHHHHCSSCEEEESCSCCEECCEEHHHHHHHHHHHHHSS----
T ss_pred HHHhCCCEEEEEeeeEeccCCcccccccc--cccccccccccccccccccCCCCeEEEEeehhHHHHHHHHHHhCC----
Confidence 458999999999999987643322211 222333444555566677899999999999999999999887532
Q ss_pred CCCcEEEecCCCCCchhHHHHHH
Q 010075 324 SDANIYHVGSSLRNPVTLGLQVA 346 (519)
Q Consensus 324 ~~~~iyni~s~~~~~i~~~~~~~ 346 (519)
.+++||++++...++..++..+
T Consensus 251 -~~~~~ni~~~~~~s~~~l~~~i 272 (363)
T d2c5aa1 251 -FREPVNIGSDEMVSMNEMAEMV 272 (363)
T ss_dssp -CCSCEEECCCCCEEHHHHHHHH
T ss_pred -CCCeEEEecCCcccHHHHHHHH
Confidence 2568999999776654444443
|
| >d1oc2a_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: dTDP-glucose 4,6-dehydratase (RmlB) species: Streptococcus suis, serotype 2 [TaxId: 1307]
Probab=99.96 E-value=2.5e-28 Score=247.23 Aligned_cols=253 Identities=21% Similarity=0.260 Sum_probs=182.1
Q ss_pred CCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEEe
Q 010075 12 NKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVP 91 (519)
Q Consensus 12 ~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v~ 91 (519)
.|+|||||||||||++|+++|++.|++| +|+++.+....... .+ .......+++++.
T Consensus 2 ~mkILVTGgtGfIGs~lv~~L~~~g~~v-~v~~~d~~~~~~~~-~~---------------------~~~~~~~~i~~~~ 58 (346)
T d1oc2a_ 2 FKNIIVTGGAGFIGSNFVHYVYNNHPDV-HVTVLDKLTYAGNK-AN---------------------LEAILGDRVELVV 58 (346)
T ss_dssp CSEEEEETTTSHHHHHHHHHHHHHCTTC-EEEEEECCCTTCCG-GG---------------------TGGGCSSSEEEEE
T ss_pred cCEEEEeCCCcHHHHHHHHHHHHCCCCe-EEEEEeCCCccccH-HH---------------------HHHhhcCCeEEEE
Confidence 4899999999999999999999999775 45544432211110 00 0112247899999
Q ss_pred ccCCCCCCCCChhhhHHHHhcCccEEEEcCccCCcc---ccHHHHHHHhHHHHHHHHHHHHhccCCceEEEEecceeecC
Q 010075 92 GDISSEDLGLKDSNLKEELWNELDIMVNSAAITKFD---ERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAYVAGE 168 (519)
Q Consensus 92 gDl~~~~lgls~~~~~~~l~~~vdiViH~Aa~v~f~---~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V~vSTa~v~~~ 168 (519)
||+. +.+....+....+.|+|+|+..... .+....+++|+.|+.++++.|++. + .++|++||+.+||.
T Consensus 59 ~Di~-------d~~~~~~~~~~~~~v~~~a~~~~~~~~~~~~~~~~~~N~~g~~nll~~~~~~-~-~k~i~~ss~~vyg~ 129 (346)
T d1oc2a_ 59 GDIA-------DAELVDKLAAKADAIVHYAAESHNDNSLNDPSPFIHTNFIGTYTLLEAARKY-D-IRFHHVSTDEVYGD 129 (346)
T ss_dssp CCTT-------CHHHHHHHHTTCSEEEECCSCCCHHHHHHCCHHHHHHHTHHHHHHHHHHHHH-T-CEEEEEEEGGGGCC
T ss_pred ccCC-------CHHHHHHHHhhhhhhhhhhhcccccchhhCcccceeeehHhHHhhhhhhccc-c-ccccccccceEecc
Confidence 9999 4555568888999999999987643 345567899999999999999986 4 47999999999986
Q ss_pred cCCeeecc-cCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcHHHHHHHHHHHHHHHh--
Q 010075 169 RTGLILEN-PLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLMQQS-- 245 (519)
Q Consensus 169 ~~~~i~E~-~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~Y~~sK~~aE~lv~~~-- 245 (519)
.. ..|. +.....+... ........|.+.|+.||.++|.+++.+
T Consensus 130 ~~--~~~~~~~~~~~~~~~--------------------------------~~e~~~~~p~s~Y~~sK~~~E~~~~~~~~ 175 (346)
T d1oc2a_ 130 LP--LREDLPGHGEGPGEK--------------------------------FTAETNYNPSSPYSSTKAASDLIVKAWVR 175 (346)
T ss_dssp BC--CGGGSTTTTCSTTSS--------------------------------BCTTSCCCCCSHHHHHHHHHHHHHHHHHH
T ss_pred cC--ccccccccccCcccc--------------------------------cccCCCCCCCCHHHHHHHHHHHHHHHHHH
Confidence 42 2222 1111011000 000112256789999999999999887
Q ss_pred hcCCcEEEEecCccccCCCCCCCcccccccccHHHHHHhhcCCceeeccCCCceeeeeeHHHHHHHHHHHHHHhccCCCC
Q 010075 246 KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMIVAMVAHAKQPSD 325 (519)
Q Consensus 246 ~~~lp~~IvRPs~V~g~~~~p~~gw~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~d~vpVDdva~aii~a~~~~~~~~~~ 325 (519)
..+++++|+||++|||+...+- ......+.....|....+++++++.++++|++|+|++++.++.... .
T Consensus 176 ~~~i~~~ilR~~~vyGp~~~~~-------~~~~~~i~~~~~~~~~~i~~~g~~~r~~i~v~D~a~a~~~~~~~~~----~ 244 (346)
T d1oc2a_ 176 SFGVKATISNCSNNYGPYQHIE-------KFIPRQITNILAGIKPKLYGEGKNVRDWIHTNDHSTGVWAILTKGR----M 244 (346)
T ss_dssp HHCCEEEEEEECCEESTTCCTT-------SHHHHHHHHHHHTCCCEEETTSCCEEECEEHHHHHHHHHHHHHHCC----T
T ss_pred HcCCCEEEEeecceeCCCCCcc-------chhHHHHHHHHcCCceeEeCCCCccccccchhhHHHHHHHHHhhcc----c
Confidence 4589999999999999865321 2334455666777777888999999999999999999998876433 2
Q ss_pred CcEEEecCCCCCchhH
Q 010075 326 ANIYHVGSSLRNPVTL 341 (519)
Q Consensus 326 ~~iyni~s~~~~~i~~ 341 (519)
++.||++++...++..
T Consensus 245 ~~~~~~~~~~~~~~~~ 260 (346)
T d1oc2a_ 245 GETYLIGADGEKNNKE 260 (346)
T ss_dssp TCEEEECCSCEEEHHH
T ss_pred CccccccccccccchH
Confidence 5789999986655433
|
| >d1z45a2 c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.96 E-value=7.1e-28 Score=243.94 Aligned_cols=261 Identities=18% Similarity=0.193 Sum_probs=181.3
Q ss_pred CEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccH-HHHHHHHHhhhhhHHHHHhhhccccccccCCceEEEe
Q 010075 13 KTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSA-ALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVP 91 (519)
Q Consensus 13 k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~-~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v~ 91 (519)
|.|||||||||||++|+++|++.| ++|+++.|....... ..+.. .....+++++.
T Consensus 2 K~ILVTGatGfIG~~lv~~Ll~~g---~~V~~~d~~~~~~~~~~~~~~---------------------~~~~~~v~~~~ 57 (347)
T d1z45a2 2 KIVLVTGGAGYIGSHTVVELIENG---YDCVVADNLSNSTYDSVARLE---------------------VLTKHHIPFYE 57 (347)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTT---CEEEEEECCSSCCTHHHHHHH---------------------HHHTSCCCEEE
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCc---CeEEEEECCCCcchhHHHhHH---------------------hhcccCCeEEE
Confidence 679999999999999999999998 577888765433221 11111 00136789999
Q ss_pred ccCCCCCCCCChhhhHHHHhc--CccEEEEcCccCCc---cccHHHHHHHhHHHHHHHHHHHHhccCCceEEEEecceee
Q 010075 92 GDISSEDLGLKDSNLKEELWN--ELDIMVNSAAITKF---DERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAYVA 166 (519)
Q Consensus 92 gDl~~~~lgls~~~~~~~l~~--~vdiViH~Aa~v~f---~~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V~vSTa~v~ 166 (519)
+|+++ .+..+.+.. ++|+|||+||.... .+.......+|+.||.+++++|++. ++++|||+||..+|
T Consensus 58 ~Dl~d-------~~~l~~~~~~~~~d~VihlAa~~~~~~~~~~~~~~~~~N~~~t~~ll~~~~~~-~i~~~i~~SS~~vy 129 (347)
T d1z45a2 58 VDLCD-------RKGLEKVFKEYKIDSVIHFAGLKAVGESTQIPLRYYHNNILGTVVLLELMQQY-NVSKFVFSSSATVY 129 (347)
T ss_dssp CCTTC-------HHHHHHHHHHSCCCEEEECCSCCCHHHHHHSHHHHHHHHHHHHHHHHHHHHHH-TCCEEEEEEEGGGG
T ss_pred eecCC-------HHHHHHHHhccCCCEEEEccccccccccccCcccccccchhhhHHHHHHHHhc-ccceEEeecceeee
Confidence 99995 333344443 79999999998753 3455678899999999999999996 89999999999999
Q ss_pred cCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcHHHHHHHHHHHHHHHh-
Q 010075 167 GERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLMQQS- 245 (519)
Q Consensus 167 ~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~Y~~sK~~aE~lv~~~- 245 (519)
|...+...+.+++|+.+. .+.+.|+.||.++|++++++
T Consensus 130 g~~~~~~~~~~~~e~~~~-----------------------------------------~p~~~Y~~sK~~~E~~~~~~~ 168 (347)
T d1z45a2 130 GDATRFPNMIPIPEECPL-----------------------------------------GPTNPYGHTKYAIENILNDLY 168 (347)
T ss_dssp CCGGGSTTCCSBCTTSCC-----------------------------------------CCCSHHHHHHHHHHHHHHHHH
T ss_pred cCcccCCCCCccccccCC-----------------------------------------CCCChhHhHHHHHHHHHHHHH
Confidence 976543333334333322 46789999999999999876
Q ss_pred ---hcCCcEEEEecCccccCCCCCCCcccc--cccccHHHHHHhhc--CCceeeccC------CCceeeeeeHHHHHHHH
Q 010075 246 ---KENLSLVIIRPTVVSGTYKEPFPGWVE--DLKTINTLFVASAQ--GNLRCLVGE------TKVIMDVIPVDMVVNAM 312 (519)
Q Consensus 246 ---~~~lp~~IvRPs~V~g~~~~p~~gw~~--~~~~~~~~i~~~~~--g~~~~~~~~------~~~~~d~vpVDdva~ai 312 (519)
..+++++++||+.|||+...+.-|... ..+.....+..... +....+.|+ +....|++++.+++.++
T Consensus 169 ~~~~~~~~~~~lR~~~v~g~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~i~i~g~~~~~~~~~~~~d~~~~~~~~~~~ 248 (347)
T d1z45a2 169 NSDKKSWKFAILRYFNPIGAHPSGLIGEDPLGIPNNLLPYMAQVAVGRREKLYIFGDDYDSRDGTPIRDYIHVVDLAKGH 248 (347)
T ss_dssp HHSTTSCEEEEEEECEEECCCTTSSCCCCCSSSCCSHHHHHHHHHTTSSSCCCCC------CCSSCEECEEEHHHHHHHH
T ss_pred HhhccCCcEEEEeecceEeecCCCccCCCccccHHHHHHHHHHHHhcCCCCeEEeCCCccccCCceeeeeeeeecccccc
Confidence 357999999999999986543322111 11223333333333 333334444 45678899999999999
Q ss_pred HHHHHHhccC---CCCCcEEEecCCCCCchhHHHHHH
Q 010075 313 IVAMVAHAKQ---PSDANIYHVGSSLRNPVTLGLQVA 346 (519)
Q Consensus 313 i~a~~~~~~~---~~~~~iyni~s~~~~~i~~~~~~~ 346 (519)
+.++...... ....++||++++...++.++...+
T Consensus 249 ~~~~~~~~~~~~~~~~~~~~Ni~~~~~~s~~e~~~~i 285 (347)
T d1z45a2 249 IAALQYLEAYNENEGLCREWNLGSGKGSTVFEVYHAF 285 (347)
T ss_dssp HHHHHHHHHSCTTCCEEEEEEESCSCCEEHHHHHHHH
T ss_pred cccccccccccccccccccceecCCCcccHHHHHHHH
Confidence 9988754322 123579999999777765554444
|
| >d1y1pa1 c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolomyces salmonicolor [TaxId: 5005]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Aldehyde reductase II species: Sporobolomyces salmonicolor [TaxId: 5005]
Probab=99.96 E-value=1e-28 Score=249.86 Aligned_cols=272 Identities=16% Similarity=0.122 Sum_probs=182.3
Q ss_pred CCCcchhhhcCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccc
Q 010075 1 MELGSVVEFLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLN 80 (519)
Q Consensus 1 ~~~~~i~~~~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~ 80 (519)
||+..|++ ||+|||||||||||++|+++|++.| .+|++++|+.... ..+.. +....
T Consensus 3 ~~~~~~~~---gk~VlVTG~sGfIGs~l~~~Ll~~G---~~V~~~vR~~~~~---~~~~~----------~~~~~----- 58 (342)
T d1y1pa1 3 IDNAVLPE---GSLVLVTGANGFVASHVVEQLLEHG---YKVRGTARSASKL---ANLQK----------RWDAK----- 58 (342)
T ss_dssp STTCSSCT---TCEEEEETTTSHHHHHHHHHHHHTT---CEEEEEESSHHHH---HHHHH----------HHHHH-----
T ss_pred CCCCCCCC---cCEEEEECCCCHHHHHHHHHHHHCc---CEEEEEeCCchhH---HHHHH----------hhhcc-----
Confidence 56666666 9999999999999999999999998 6789999975322 22210 00100
Q ss_pred cccCCceEEEeccCCCCCCCCChhhhHHHHhcCccEEEEcCccCCccccHHHHHHHhHHHHHHHHHHHHhccCCceEEEE
Q 010075 81 SFISEKITFVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKFDERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHV 160 (519)
Q Consensus 81 ~~~~~~v~~v~gDl~~~~lgls~~~~~~~l~~~vdiViH~Aa~v~f~~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V~v 160 (519)
........+.+|+.++ ... ..++.++|+|+|+|+...+..+....+.+|+.||.+++++|.+.+++++|||+
T Consensus 59 -~~~~~~~~~~~Dl~~~------~~~-~~~~~~~~~v~~~a~~~~~~~~~~~~~~~nv~gt~~ll~~~~~~~~v~~~i~~ 130 (342)
T d1y1pa1 59 -YPGRFETAVVEDMLKQ------GAY-DEVIKGAAGVAHIASVVSFSNKYDEVVTPAIGGTLNALRAAAATPSVKRFVLT 130 (342)
T ss_dssp -STTTEEEEECSCTTST------TTT-TTTTTTCSEEEECCCCCSCCSCHHHHHHHHHHHHHHHHHHHHTCTTCCEEEEE
T ss_pred -ccccccEEEeccccch------hhh-hhhcccchhhhhhcccccccccccccccchhhhHHHHHHhhhccccccccccc
Confidence 0123445688999863 232 36678899999999999988888888999999999999999998789999999
Q ss_pred ecceeecCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcHHHHHHHHHHH
Q 010075 161 STAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEM 240 (519)
Q Consensus 161 STa~v~~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~Y~~sK~~aE~ 240 (519)
||..+.+...... +..+.+....+.+....... ........+.+.|+.||..+|+
T Consensus 131 SS~~~~~~~~~~~-~~~~~~e~~~~~~~~~~~~~------------------------~~e~~~~~p~~~Y~~sK~~~E~ 185 (342)
T d1y1pa1 131 SSTVSALIPKPNV-EGIYLDEKSWNLESIDKAKT------------------------LPESDPQKSLWVYAASKTEAEL 185 (342)
T ss_dssp CCGGGTCCCCTTC-CCCEECTTCCCHHHHHHHHH------------------------SCTTSTTHHHHHHHHHHHHHHH
T ss_pred ccceeeccCCCCC-CCcccccccccccccccccc------------------------ccccCCCCCcCcccchhHhHHH
Confidence 9976543221111 11111111212211110000 0011122345689999999999
Q ss_pred HHHHh----hcCCcEEEEecCccccCCCCCCCcccccccccHHHHHHhhcCCceeeccCCCceeeeeeHHHHHHHHHHHH
Q 010075 241 LMQQS----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMIVAM 316 (519)
Q Consensus 241 lv~~~----~~~lp~~IvRPs~V~g~~~~p~~gw~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~d~vpVDdva~aii~a~ 316 (519)
+++.+ ..++.++++||+.|+|+...|.. .......++..+..|...... .+....+++||+|+|++++.++
T Consensus 186 ~~~~~~~~~~~~~~~~~i~p~~v~Gp~~~~~~----~~~~~~~~~~~l~~g~~~~~~-~~~~~~~~v~v~Dva~~~i~~l 260 (342)
T d1y1pa1 186 AAWKFMDENKPHFTLNAVLPNYTIGTIFDPET----QSGSTSGWMMSLFNGEVSPAL-ALMPPQYYVSAVDIGLLHLGCL 260 (342)
T ss_dssp HHHHHHHHHCCSSEEEEEEESEEECCCSCTTT----CCCHHHHHHHHHHTTCCCHHH-HTCCSEEEEEHHHHHHHHHHHH
T ss_pred HHHHhhhhcccccccceecccceeCCCCCccc----cccchHHHHHHHHcCCcCccc-CCccceeeeeHHHHHHHHHHhh
Confidence 88766 34688999999999998654432 112345566677777654333 3456689999999999999988
Q ss_pred HHhccCCCCCcEEEecCCCCCc
Q 010075 317 VAHAKQPSDANIYHVGSSLRNP 338 (519)
Q Consensus 317 ~~~~~~~~~~~iyni~s~~~~~ 338 (519)
..... ...||++++...+
T Consensus 261 ~~~~~----~g~~~~~~~~~~t 278 (342)
T d1y1pa1 261 VLPQI----ERRRVYGTAGTFD 278 (342)
T ss_dssp HCTTC----CSCEEEECCEEEC
T ss_pred cCccc----cceEEEEcCCceE
Confidence 74322 3346677774433
|
| >d1rpna_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Pseudomonas aeruginosa [TaxId: 287]
Probab=99.96 E-value=6.5e-28 Score=240.94 Aligned_cols=244 Identities=17% Similarity=0.138 Sum_probs=180.3
Q ss_pred CEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEEec
Q 010075 13 KTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVPG 92 (519)
Q Consensus 13 k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v~g 92 (519)
|+|||||||||||++|++.|++.| ++|+++.|...... .+++.. + ....+++++.+
T Consensus 1 k~vLItG~tGfiG~~l~~~Ll~~g---~~V~~~~r~~~~~~-~~~l~~-~-------------------~~~~~~~~~~~ 56 (321)
T d1rpna_ 1 RSALVTGITGQDGAYLAKLLLEKG---YRVHGLVARRSSDT-RWRLRE-L-------------------GIEGDIQYEDG 56 (321)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTT---CEEEEEECCCSSCC-CHHHHH-T-------------------TCGGGEEEEEC
T ss_pred CEEEEECCCCHHHHHHHHHHHHCc---CEEEEEECCCCccc-HHHHHH-h-------------------cccCCcEEEEc
Confidence 789999999999999999999998 68899999764432 233321 0 01367899999
Q ss_pred cCCCCCCCCChhhhHHHHhc--CccEEEEcCccCCcc---ccHHHHHHHhHHHHHHHHHHHHhccCCceEEEEecceeec
Q 010075 93 DISSEDLGLKDSNLKEELWN--ELDIMVNSAAITKFD---ERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAYVAG 167 (519)
Q Consensus 93 Dl~~~~lgls~~~~~~~l~~--~vdiViH~Aa~v~f~---~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V~vSTa~v~~ 167 (519)
|+++ .+....... ..++++|+|+..... ++....+..|+.||.+++++|++.+..++|++.||+.+++
T Consensus 57 Dl~d-------~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~n~~g~~~~l~~~~~~~~~~~~i~~Ss~~~~~ 129 (321)
T d1rpna_ 57 DMAD-------ACSVQRAVIKAQPQEVYNLAAQSFVGASWNQPVTTGVVDGLGVTHLLEAIRQFSPETRFYQASTSEMFG 129 (321)
T ss_dssp CTTC-------HHHHHHHHHHHCCSEEEECCSCCCHHHHTTSHHHHHHHHTHHHHHHHHHHHHHCTTSEEEEEEEGGGGC
T ss_pred cccC-------hHHhhhhhccccccccccccccccccccccchHHHHhhhhhchHHHHHHHHHhCCCcccccccchhhcC
Confidence 9995 232333333 578999999876543 5577889999999999999999986667899999999987
Q ss_pred CcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcHHHHHHHHHHHHHHHh--
Q 010075 168 ERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLMQQS-- 245 (519)
Q Consensus 168 ~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~Y~~sK~~aE~lv~~~-- 245 (519)
.... ..++|+.+. .+.+.|+.||.++|+++..+
T Consensus 130 ~~~~----~~~~E~~~~-----------------------------------------~p~~~Y~~sK~~~E~~~~~~~~ 164 (321)
T d1rpna_ 130 LIQA----ERQDENTPF-----------------------------------------YPRSPYGVAKLYGHWITVNYRE 164 (321)
T ss_dssp SCSS----SSBCTTSCC-----------------------------------------CCCSHHHHHHHHHHHHHHHHHH
T ss_pred cccC----CCCCCCCCc-----------------------------------------cccChhHHHHHHHHHHHHHHHh
Confidence 6442 222232322 45688999999999999887
Q ss_pred hcCCcEEEEecCccccCCCCCCCcccccccccHHHHHHhhcCC-ceeeccCCCceeeeeeHHHHHHHHHHHHHHhccCCC
Q 010075 246 KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGN-LRCLVGETKVIMDVIPVDMVVNAMIVAMVAHAKQPS 324 (519)
Q Consensus 246 ~~~lp~~IvRPs~V~g~~~~p~~gw~~~~~~~~~~i~~~~~g~-~~~~~~~~~~~~d~vpVDdva~aii~a~~~~~~~~~ 324 (519)
..+++++++||+.|||+...+ .+.. ..+..++.....|. .....+++++.+|++||+|+|++++.++.+..
T Consensus 165 ~~~~~~~~lr~~~vyGp~~~~--~~~~--~~i~~~~~~~~~~~~~~i~~g~g~~~r~~i~v~D~~~~~~~~~~~~~---- 236 (321)
T d1rpna_ 165 SFGLHASSGILFNHESPLRGI--EFVT--RKVTDAVARIKLGKQQELRLGNVDAKRDWGFAGDYVEAMWLMLQQDK---- 236 (321)
T ss_dssp HHCCCEEEEEECCEECTTSCT--TSHH--HHHHHHHHHHHTTSCSCEEESCTTCEEECEEHHHHHHHHHHHHHSSS----
T ss_pred hcCCcEEEEEEecccCCCccc--cccH--HHHHHHHHHHHhCCCCcEEECCCCeEEccEEeHHHHHHHHHHHhcCC----
Confidence 468999999999999986532 1111 22344555555554 34457899999999999999999999986432
Q ss_pred CCcEEEecCCCCCchhH
Q 010075 325 DANIYHVGSSLRNPVTL 341 (519)
Q Consensus 325 ~~~iyni~s~~~~~i~~ 341 (519)
...||++++...++..
T Consensus 237 -~~~~ni~~~~~~s~~~ 252 (321)
T d1rpna_ 237 -ADDYVVATGVTTTVRD 252 (321)
T ss_dssp -CCCEEECCSCEEEHHH
T ss_pred -cCCceecccccceehh
Confidence 4579999987666443
|
| >d1t2aa_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.96 E-value=5.1e-28 Score=244.35 Aligned_cols=251 Identities=16% Similarity=0.127 Sum_probs=175.9
Q ss_pred CEE-EEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEEe
Q 010075 13 KTI-LVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVP 91 (519)
Q Consensus 13 k~V-lITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v~ 91 (519)
|+| ||||||||||++|+++|++.| ++|++++|....... .++. .+ +. ........+++++.
T Consensus 1 kKI~LVTG~tGfIG~~l~~~Ll~~g---~~V~~i~r~~~~~~~-~~~~-~~-----~~--------~~~~~~~~~~~~~~ 62 (347)
T d1t2aa_ 1 RNVALITGITGQDGSYLAEFLLEKG---YEVHGIVRRSSSFNT-GRIE-HL-----YK--------NPQAHIEGNMKLHY 62 (347)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTT---CEEEEEECCCSSCCC-TTTG-GG-----C-----------------CEEEEE
T ss_pred CCEEEEecCCcHHHHHHHHHHHHCc---CEEEEEECCCcccch-hhHH-HH-----hh--------chhhhccCCcEEEE
Confidence 567 999999999999999999998 688999996532111 0000 00 00 00111236789999
Q ss_pred ccCCCCCCCCChhhhHHHHhc--CccEEEEcCccCCcc---ccHHHHHHHhHHHHHHHHHHHHhcc--CCceEEEEecce
Q 010075 92 GDISSEDLGLKDSNLKEELWN--ELDIMVNSAAITKFD---ERYDVAFGINTLGVIHLVNFAKKCV--KLKVFVHVSTAY 164 (519)
Q Consensus 92 gDl~~~~lgls~~~~~~~l~~--~vdiViH~Aa~v~f~---~~~~~~~~~Nv~gt~~ll~~a~~~~--~l~~~V~vSTa~ 164 (519)
+|+++ .+....+.. ++++|+|+||..... ++....+++|+.||.+++++|+++. +.++|||+||+.
T Consensus 63 ~Dl~d-------~~~~~~~~~~~~~~~v~~~~a~~~~~~~~~~~~~~~~~Nv~gt~~ll~~~~~~~~~~~~~~i~~SS~~ 135 (347)
T d1t2aa_ 63 GDLTD-------STCLVKIINEVKPTEIYNLGAQSHVKISFDLAEYTADVDGVGTLRLLDAVKTCGLINSVKFYQASTSE 135 (347)
T ss_dssp CCTTC-------HHHHHHHHHHHCCSEEEECCSCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHTTCTTTCEEEEEEEGG
T ss_pred eecCC-------chhhHHHHhhcccceeeeeeeccccchhhccchhhhhhHHHHHHHHHHHHHHcCCCCCcEEEEecchh
Confidence 99995 333345543 688999999986643 4566678999999999999999863 345899999999
Q ss_pred eecCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcHHHHHHHHHHHHHHH
Q 010075 165 VAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLMQQ 244 (519)
Q Consensus 165 v~~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~Y~~sK~~aE~lv~~ 244 (519)
|||... +.+++|+.+. .|.+.|+.||.++|++++.
T Consensus 136 vyg~~~----~~~~~E~~~~-----------------------------------------~P~~~Yg~sK~~aE~~~~~ 170 (347)
T d1t2aa_ 136 LYGKVQ----EIPQKETTPF-----------------------------------------YPRSPYGAAKLYAYWIVVN 170 (347)
T ss_dssp GTCSCS----SSSBCTTSCC-----------------------------------------CCCSHHHHHHHHHHHHHHH
T ss_pred eecCCC----CCCCCCCCCC-----------------------------------------CCCCHHHHHHHHHHHHHHH
Confidence 998643 2334443332 4568899999999999988
Q ss_pred h--hcCCcEEEEecCccccCCCCCCCcccccccccHHHHHHhhcCCceeeccCCCceeeeeeHHHHHHHHHHHHHHhccC
Q 010075 245 S--KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMIVAMVAHAKQ 322 (519)
Q Consensus 245 ~--~~~lp~~IvRPs~V~g~~~~p~~gw~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~d~vpVDdva~aii~a~~~~~~~ 322 (519)
+ ..+++++++||+.|||+...+.. ... .....++.....+......+++++.++++||+|+|++++.++....
T Consensus 171 ~~~~~~~~~~ilr~~~vyGp~~~~~~--~~~-~~~~~i~~~~~~~~~~~~~g~g~~~r~~i~v~D~~~a~~~~~~~~~-- 245 (347)
T d1t2aa_ 171 FREAYNLFAVNGILFNHESPRRGANF--VTR-KISRSVAKIYLGQLECFSLGNLDAKRDWGHAKDYVEAMWLMLQNDE-- 245 (347)
T ss_dssp HHHHHCCEEEEEEECCEECTTSCTTS--HHH-HHHHHHHHHHHTSCSCEEESCTTCEECCEEHHHHHHHHHHHHHSSS--
T ss_pred HHHHhCCCEEEEEecceeCCCCCCCc--ccc-ccceeeehhhcCCcceeecCCCcceeeeeEecHHHHHHHHHhhcCC--
Confidence 6 56899999999999998653221 111 1122233344445556677899999999999999999999987532
Q ss_pred CCCCcEEEecCCCCCchhH
Q 010075 323 PSDANIYHVGSSLRNPVTL 341 (519)
Q Consensus 323 ~~~~~iyni~s~~~~~i~~ 341 (519)
...|+++.+...++..
T Consensus 246 ---~~~~~~~~~~~~~~~~ 261 (347)
T d1t2aa_ 246 ---PEDFVIATGEVHSVRE 261 (347)
T ss_dssp ---CCCEEECCSCCEEHHH
T ss_pred ---Cccceeccccccccch
Confidence 2468888876655443
|
| >d1i24a_ c.2.1.2 (A:) Sulfolipid biosynthesis protein SQD1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Sulfolipid biosynthesis protein SQD1 species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=99.96 E-value=3.6e-28 Score=250.16 Aligned_cols=248 Identities=15% Similarity=0.099 Sum_probs=170.9
Q ss_pred CCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEE---ecC-----------CcccHHHHHHHHHhhhhhHHHHHhhhcc
Q 010075 12 NKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFV---RAA-----------DIDSAALRFQNEVLAKDVFNVLKEKWGT 77 (519)
Q Consensus 12 ~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~Lv---R~~-----------~~~~~~~rl~~~~~~~~~f~~l~~~~~~ 77 (519)
||+|||||||||||++|+++|++.| ++|+++. |+. ......+++. ++...
T Consensus 1 g~kILVTGatGfiG~~lv~~Ll~~g---~~V~~iDnl~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~--- 64 (393)
T d1i24a_ 1 GSRVMVIGGDGYCGWATALHLSKKN---YEVCIVDNLVRRLFDHQLGLESLTPIASIHDRIS----------RWKAL--- 64 (393)
T ss_dssp -CEEEEETTTSHHHHHHHHHHHHTT---CEEEEEECCHHHHHHHHHTCCCSSCCCCHHHHHH----------HHHHH---
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCc---CEEEEEecCCcccccccccccccccccchHHHHH----------HHHhh---
Confidence 7999999999999999999999999 4566653 211 1111112111 11111
Q ss_pred ccccccCCceEEEeccCCCCCCCCChhhhHHHHhc--CccEEEEcCccCCcc------ccHHHHHHHhHHHHHHHHHHHH
Q 010075 78 RLNSFISEKITFVPGDISSEDLGLKDSNLKEELWN--ELDIMVNSAAITKFD------ERYDVAFGINTLGVIHLVNFAK 149 (519)
Q Consensus 78 ~~~~~~~~~v~~v~gDl~~~~lgls~~~~~~~l~~--~vdiViH~Aa~v~f~------~~~~~~~~~Nv~gt~~ll~~a~ 149 (519)
...+++++.|||++ .+.++.+++ ++|+|||+||..... +.....+.+|+.||.+++++|+
T Consensus 65 -----~~~~i~~~~~Dl~d-------~~~l~~~~~~~~~d~ViHlAa~~~~~~s~~~~~~~~~~~~~Nv~gt~nll~~~~ 132 (393)
T d1i24a_ 65 -----TGKSIELYVGDICD-------FEFLAESFKSFEPDSVVHFGEQRSAPYSMIDRSRAVYTQHNNVIGTLNVLFAIK 132 (393)
T ss_dssp -----HCCCCEEEESCTTS-------HHHHHHHHHHHCCSEEEECCSCCCHHHHTSCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred -----cCCCcEEEEccCCC-------HHHHHHHHHhhcchheeccccccccccccccccccccccccccccccHHHHHHH
Confidence 13679999999994 444456665 579999999976542 2344568999999999999999
Q ss_pred hccCCceEEEEecceeecCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCc
Q 010075 150 KCVKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPN 229 (519)
Q Consensus 150 ~~~~l~~~V~vSTa~v~~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n 229 (519)
+.+..+.+++.||..+++......+|.......... + .+......+.+
T Consensus 133 ~~~~~~~~i~~ss~~~~~~~~~~~~~~~~~~~~~~~--------------------~------------~~~~~~~~p~~ 180 (393)
T d1i24a_ 133 EFGEECHLVKLGTMGEYGTPNIDIEEGYITITHNGR--------------------T------------DTLPYPKQASS 180 (393)
T ss_dssp HHCTTCEEEEECCGGGGCCCSSCBCSSEEEEEETTE--------------------E------------EEEECCCCCCS
T ss_pred Hhccccceeecccccccccccccccccccccccccc--------------------c------------ccccccccccc
Confidence 986666788899988887654333332111000000 0 00001225678
Q ss_pred HHHHHHHHHHHHHHHh--hcCCcEEEEecCccccCCCCCCC--ccc----cc----ccccHHHHHHhhcCCceeeccCCC
Q 010075 230 TYVFTKTMGEMLMQQS--KENLSLVIIRPTVVSGTYKEPFP--GWV----ED----LKTINTLFVASAQGNLRCLVGETK 297 (519)
Q Consensus 230 ~Y~~sK~~aE~lv~~~--~~~lp~~IvRPs~V~g~~~~p~~--gw~----~~----~~~~~~~i~~~~~g~~~~~~~~~~ 297 (519)
.|+.||.++|.++..+ ..+++++++||+.|||+...+.. +.. .. ......++.....|....++|++.
T Consensus 181 ~Y~~sK~~aE~~~~~~~~~~~l~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~i~g~~~ 260 (393)
T d1i24a_ 181 FYHLSKVHDSHNIAFTCKAWGIRATDLNQGVVYGVKTDETEMHEELRNRLDYDAVFGTALNRFCVQAAVGHPLTVYGKGG 260 (393)
T ss_dssp HHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEECSCCTTGGGSGGGCCCCCCSTTTCCHHHHHHHHHHHTCCEEEETTSC
T ss_pred HHHHHhhhhcccccccccccceeeeecccccccCCCccccccccccccccccccccccchhhhhHHhhcCCeeEEeeecc
Confidence 9999999999999877 56899999999999999764321 110 00 012345666778888888899999
Q ss_pred ceeeeeeHHHHHHHHHHHHHHh
Q 010075 298 VIMDVIPVDMVVNAMIVAMVAH 319 (519)
Q Consensus 298 ~~~d~vpVDdva~aii~a~~~~ 319 (519)
+.+||+||+|+|++++.++.+.
T Consensus 261 ~~rd~v~v~D~~~a~~~~~~~~ 282 (393)
T d1i24a_ 261 QTRGYLDIRDTVQCVEIAIANP 282 (393)
T ss_dssp CEEEEEEHHHHHHHHHHHHHSC
T ss_pred cccccccccchHHHHHHHHHhh
Confidence 9999999999999999998743
|
| >d1gy8a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Trypanosoma brucei [TaxId: 5691]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) species: Trypanosoma brucei [TaxId: 5691]
Probab=99.95 E-value=1.2e-26 Score=238.02 Aligned_cols=273 Identities=14% Similarity=0.174 Sum_probs=178.2
Q ss_pred CCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEe---cCCcccH---HHHHHHHHhhhhhHHHHHhhhccccccccC
Q 010075 11 ENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVR---AADIDSA---ALRFQNEVLAKDVFNVLKEKWGTRLNSFIS 84 (519)
Q Consensus 11 ~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR---~~~~~~~---~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~ 84 (519)
.+|+|||||||||||++|+++||+.+. ++|+++.+ +...... .++... .+ ............
T Consensus 1 ~~MKVLITG~tGfIGs~lv~~LL~~~~--~~V~~~D~l~~~~~~~~~~~~~~~~~~---------~~-~~~~~~~~~~~~ 68 (383)
T d1gy8a_ 1 SHMRVLVCGGAGYIGSHFVRALLRDTN--HSVVIVDSLVGTHGKSDHVETRENVAR---------KL-QQSDGPKPPWAD 68 (383)
T ss_dssp CCCEEEEETTTSHHHHHHHHHHHHHCC--CEEEEEECCTTTTTCCTTSCCHHHHHH---------HH-HHSCSSCCTTTT
T ss_pred CcCEEEEeCCCcHHHHHHHHHHHHhCC--CEEEEEecCCcccccchhhhhhhhHHH---------Hh-hhhccccccccc
Confidence 368999999999999999999997532 57788753 2211111 111110 00 011111112223
Q ss_pred CceEEEeccCCCCCCCCChhhhHHHHh---cCccEEEEcCccCCcc---ccHHHHHHHhHHHHHHHHHHHHhccCCceEE
Q 010075 85 EKITFVPGDISSEDLGLKDSNLKEELW---NELDIMVNSAAITKFD---ERYDVAFGINTLGVIHLVNFAKKCVKLKVFV 158 (519)
Q Consensus 85 ~~v~~v~gDl~~~~lgls~~~~~~~l~---~~vdiViH~Aa~v~f~---~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V 158 (519)
..+.++.||+++ .+.++.++ ..+|+|||+||..... +......++|+.||.+++++|++. ++++++
T Consensus 69 ~~~~~~~~Di~d-------~~~l~~~~~~~~~~d~ViH~Aa~~~~~~~~~~~~~~~~~N~~~t~~~l~~~~~~-~~~~~~ 140 (383)
T d1gy8a_ 69 RYAALEVGDVRN-------EDFLNGVFTRHGPIDAVVHMCAFLAVGESVRDPLKYYDNNVVGILRLLQAMLLH-KCDKII 140 (383)
T ss_dssp CCCEEEESCTTC-------HHHHHHHHHHSCCCCEEEECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHT-TCCEEE
T ss_pred cceEEEECcccC-------HHHhhhhhhccceeehhhcccccccccccccccccccccccccccccchhhhcc-CCcccc
Confidence 568899999995 33344544 3589999999987653 456677899999999999999996 889999
Q ss_pred EEecceeecCcCC---eeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcHHHHHH
Q 010075 159 HVSTAYVAGERTG---LILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTK 235 (519)
Q Consensus 159 ~vSTa~v~~~~~~---~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~Y~~sK 235 (519)
++||..+++.... ..++.++.|+.+ ..|.+.|+.+|
T Consensus 141 ~~~s~~~~~~~~~~~~~~~~~~~~e~~~-----------------------------------------~~p~~~Y~~sK 179 (383)
T d1gy8a_ 141 FSSSAAIFGNPTMGSVSTNAEPIDINAK-----------------------------------------KSPESPYGESK 179 (383)
T ss_dssp EEEEGGGTBSCCC-----CCCCBCTTSC-----------------------------------------CBCSSHHHHHH
T ss_pred cccccccccccccccccccccccccccC-----------------------------------------CCCCCHHHhhH
Confidence 9999998876432 112222322222 15678999999
Q ss_pred HHHHHHHHHh--hcCCcEEEEecCccccCCCCCC-CcccccccccHHHH-H----H------------hhcCCceeec--
Q 010075 236 TMGEMLMQQS--KENLSLVIIRPTVVSGTYKEPF-PGWVEDLKTINTLF-V----A------------SAQGNLRCLV-- 293 (519)
Q Consensus 236 ~~aE~lv~~~--~~~lp~~IvRPs~V~g~~~~p~-~gw~~~~~~~~~~i-~----~------------~~~g~~~~~~-- 293 (519)
..+|++++.+ ..+++++++||+.|||+...+. +.+..........+ . . ...+....+.
T Consensus 180 ~~~e~~~~~~~~~~gl~~~~lR~~~vyG~~~~~~~~~~~~~~~~~ip~ii~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~ 259 (383)
T d1gy8a_ 180 LIAERMIRDCAEAYGIKGICLRYFNACGAHEDGDIGEHYQGSTHLIPIILGRVMSDIAPDQRLTIHEDASTDKRMPIFGT 259 (383)
T ss_dssp HHHHHHHHHHHHHHCCEEEEEEECEEECCCTTSSCSCCSTTCCSHHHHHHHHHHHHHSCC-----------CCCEEEECS
T ss_pred hHHHHHHHHHHHHhCCCEEEEecceeeccCccccccccccccchhHHHHHHHHHhhccccccchhhhhhhcCCceEEeCC
Confidence 9999999987 4689999999999999987542 22222222211111 1 1 1122222333
Q ss_pred ----cCCCceeeeeeHHHHHHHHHHHHHHhccC-----CCCCcEEEecCCCCCchhHHHH
Q 010075 294 ----GETKVIMDVIPVDMVVNAMIVAMVAHAKQ-----PSDANIYHVGSSLRNPVTLGLQ 344 (519)
Q Consensus 294 ----~~~~~~~d~vpVDdva~aii~a~~~~~~~-----~~~~~iyni~s~~~~~i~~~~~ 344 (519)
++|.+.+||+||+|+|++++.++...... ....++||++++...++..+..
T Consensus 260 ~~~~~dg~~~Rdfi~v~D~~~a~~~~~~~~~~~~~~~~~~~~~i~Ni~s~~~~s~~el~~ 319 (383)
T d1gy8a_ 260 DYPTPDGTCVRDYVHVCDLASAHILALDYVEKLGPNDKSKYFSVFNLGTSRGYSVREVIE 319 (383)
T ss_dssp CSSSTTSSCEECEEEHHHHHHHHHHHHHHHHTCCTTTGGGSEEEEEESCSCCEEHHHHHH
T ss_pred ccccCCCCeEEeeEEHHHHHHHHHHHHhhhccccccccccCccEEEeCCCCceeHHHHHH
Confidence 35788899999999999999998754321 1235799999997655443333
|
| >d1ek6a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.95 E-value=1.6e-26 Score=233.54 Aligned_cols=254 Identities=18% Similarity=0.202 Sum_probs=175.4
Q ss_pred CEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCc-------ccHHHHHHHHHhhhhhHHHHHhhhccccccccCC
Q 010075 13 KTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADI-------DSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISE 85 (519)
Q Consensus 13 k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~-------~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~ 85 (519)
|+|||||||||||++|+++|++.| ++|+++.|.... ....+++. . ....
T Consensus 3 kKILITG~tGfIGs~lv~~Ll~~g---~~V~~ld~~~~~~~~~~~~~~~~~~~~-------------~--------~~~~ 58 (346)
T d1ek6a_ 3 EKVLVTGGAGYIGSHTVLELLEAG---YLPVVIDNFHNAFRGGGSLPESLRRVQ-------------E--------LTGR 58 (346)
T ss_dssp SEEEEETTTSHHHHHHHHHHHHTT---CCEEEEECSSSSCBCSSSSBHHHHHHH-------------H--------HHTC
T ss_pred CeEEEECCCcHHHHHHHHHHHHCc---CEEEEEECCCccccccccchHHHHHHH-------------H--------hcCC
Confidence 689999999999999999999998 566787642211 11222221 0 1136
Q ss_pred ceEEEeccCCCCCCCCChhhhHHHHh--cCccEEEEcCccCCcc---ccHHHHHHHhHHHHHHHHHHHHhccCCceEEEE
Q 010075 86 KITFVPGDISSEDLGLKDSNLKEELW--NELDIMVNSAAITKFD---ERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHV 160 (519)
Q Consensus 86 ~v~~v~gDl~~~~lgls~~~~~~~l~--~~vdiViH~Aa~v~f~---~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V~v 160 (519)
++.++.+|+++ .+.++... ..+++|+|+||..+.. .+....+++|+.||.+++++|++. ++++|+|+
T Consensus 59 ~~~~~~~Dl~d-------~~~l~~~~~~~~~~~i~h~Aa~~~~~~~~~~p~~~~~~Nv~gt~~l~~~~~~~-~v~~~i~~ 130 (346)
T d1ek6a_ 59 SVEFEEMDILD-------QGALQRLFKKYSFMAVIHFAGLKAVGESVQKPLDYYRVNLTGTIQLLEIMKAH-GVKNLVFS 130 (346)
T ss_dssp CCEEEECCTTC-------HHHHHHHHHHCCEEEEEECCSCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHT-TCCEEEEE
T ss_pred CcEEEEeeccc-------cccccccccccccccccccccccCcHhhHhCHHHHHHhhhcccccccchhhhc-Cccccccc
Confidence 88999999995 33333444 3578999999987643 345677999999999999999986 89999999
Q ss_pred ecceeecCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcHHHHHHHHHHH
Q 010075 161 STAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEM 240 (519)
Q Consensus 161 STa~v~~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~Y~~sK~~aE~ 240 (519)
||+.+++.......+...+ ...+.++|+.+|..+|+
T Consensus 131 ss~~~~~~~~~~~~~~~~~--------------------------------------------~~~~~~~Y~~~k~~~e~ 166 (346)
T d1ek6a_ 131 SSATVYGNPQYLPLDEAHP--------------------------------------------TGGCTNPYGKSKFFIEE 166 (346)
T ss_dssp EEGGGGCSCSSSSBCTTSC--------------------------------------------CCCCSSHHHHHHHHHHH
T ss_pred ccceeeecccccccccccc--------------------------------------------ccccCChHHHHHHHHHH
Confidence 9999998754211111110 11456789999999999
Q ss_pred HHHHh---hcCCcEEEEecCccccCCCCCCCccccc--ccccHHHHH--HhhcCCceeec------cCCCceeeeeeHHH
Q 010075 241 LMQQS---KENLSLVIIRPTVVSGTYKEPFPGWVED--LKTINTLFV--ASAQGNLRCLV------GETKVIMDVIPVDM 307 (519)
Q Consensus 241 lv~~~---~~~lp~~IvRPs~V~g~~~~p~~gw~~~--~~~~~~~i~--~~~~g~~~~~~------~~~~~~~d~vpVDd 307 (519)
.+.++ ..+++.+++||+.+||+......|.... .......+. ...++....+. .++.+.+||+||+|
T Consensus 167 ~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~g~~~~~~~g~~~Rdfi~v~D 246 (346)
T d1ek6a_ 167 MIRDLCQADKTWNAVLLRYFNPTGAHASGCIGEDPQGIPNNLMPYVSQVAIGRREALNVFGNDYDTEDGTGVRDYIHVVD 246 (346)
T ss_dssp HHHHHHHHCTTCEEEEEEECEEECCCTTSSCCCCCSSSCCSHHHHHHHHHHTSSSCEEEECSCSSSSSSSCEECEEEHHH
T ss_pred HHHHHHHhccCCceEEEeecceeccCCCCCcCccccccHHHHHHHHHHHHHcCCCcEEEcCCcccCCCCCeeEeEEEEEe
Confidence 99876 3589999999999999876433222111 112222222 33344444443 34667899999999
Q ss_pred HHHHHHHHHHHhccCCCCCcEEEecCCCCCchhHHH
Q 010075 308 VVNAMIVAMVAHAKQPSDANIYHVGSSLRNPVTLGL 343 (519)
Q Consensus 308 va~aii~a~~~~~~~~~~~~iyni~s~~~~~i~~~~ 343 (519)
+|+++..++....... .+++||++++...++..+.
T Consensus 247 ~a~~~~~~~~~~~~~~-~~~i~Ni~~~~~~s~~dl~ 281 (346)
T d1ek6a_ 247 LAKGHIAALRKLKEQC-GCRIYNLGTGTGYSVLQMV 281 (346)
T ss_dssp HHHHHHHHHHHHTTTC-CEEEEEECCSCCEEHHHHH
T ss_pred ccchhhhhcccccccc-CceEEEeCCCCcccHHHHH
Confidence 9999998877544332 3689999998665543333
|
| >d1e6ua_ c.2.1.2 (A:) GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase) species: Escherichia coli [TaxId: 562]
Probab=99.95 E-value=1.3e-26 Score=230.82 Aligned_cols=239 Identities=12% Similarity=0.075 Sum_probs=168.7
Q ss_pred CCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEE
Q 010075 11 ENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFV 90 (519)
Q Consensus 11 ~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v 90 (519)
+.|+|||||||||||++|++.|++.|+ .++++.+..
T Consensus 1 ~kkkIlITG~tGfiG~~l~~~L~~~g~---~vi~~~~~~----------------------------------------- 36 (315)
T d1e6ua_ 1 AKQRVFIAGHRGMVGSAIRRQLEQRGD---VELVLRTRD----------------------------------------- 36 (315)
T ss_dssp CCEEEEEETTTSHHHHHHHHHHTTCTT---EEEECCCTT-----------------------------------------
T ss_pred CCCEEEEEcCCcHHHHHHHHHHHHCcC---EEEEecCch-----------------------------------------
Confidence 357999999999999999999999883 444432211
Q ss_pred eccCCCCCCCCChhhhHHHHh--cCccEEEEcCccCCcc----ccHHHHHHHhHHHHHHHHHHHHhccCCceEEEEecce
Q 010075 91 PGDISSEDLGLKDSNLKEELW--NELDIMVNSAAITKFD----ERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAY 164 (519)
Q Consensus 91 ~gDl~~~~lgls~~~~~~~l~--~~vdiViH~Aa~v~f~----~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V~vSTa~ 164 (519)
..|+.+ .+....++ .++|.|+|+|+.+... .+....++.|+.||.+++++|++. ++++|||+||..
T Consensus 37 ~~~~~~-------~~~~~~~~~~~~~d~v~~~a~~~~~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~-~v~~~i~~SS~~ 108 (315)
T d1e6ua_ 37 ELNLLD-------SRAVHDFFASERIDQVYLAAAKVGGIVANNTYPADFIYQNMMIESNIIHAAHQN-DVNKLLFLGSSC 108 (315)
T ss_dssp TCCTTC-------HHHHHHHHHHHCCSEEEECCCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHT-TCCEEEEECCGG
T ss_pred hccccC-------HHHHHHHHhhcCCCEEEEcchhccccccchhhHHHHHHHHHHHHHHHHHHHHHc-CCCEEEEECCce
Confidence 235553 22233443 3689999999887542 456667899999999999999997 899999999999
Q ss_pred eecCcCC-eeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCC-cHHHHHHHHHHHHH
Q 010075 165 VAGERTG-LILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWP-NTYVFTKTMGEMLM 242 (519)
Q Consensus 165 v~~~~~~-~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~-n~Y~~sK~~aE~lv 242 (519)
+||.... .++|....+.++ .++ +.|+.||.++|+++
T Consensus 109 vyg~~~~~~~~E~~~~~~~~------------------------------------------~~~~~~Y~~sK~~~E~~~ 146 (315)
T d1e6ua_ 109 IYPKLAKQPMAESELLQGTL------------------------------------------EPTNEPYAIAKIAGIKLC 146 (315)
T ss_dssp GSCTTCCSSBCGGGTTSSCC------------------------------------------CGGGHHHHHHHHHHHHHH
T ss_pred EcCCCCCCCccCCccccCCC------------------------------------------CCCCCHHHHHHHHHHHHH
Confidence 9986542 344443221111 223 46999999999999
Q ss_pred HHh--hcCCcEEEEecCccccCCCCCCCc--ccccccccHHHHHHhhcCCceeeccCCCceeeeeeHHHHHHHHHHHHHH
Q 010075 243 QQS--KENLSLVIIRPTVVSGTYKEPFPG--WVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMIVAMVA 318 (519)
Q Consensus 243 ~~~--~~~lp~~IvRPs~V~g~~~~p~~g--w~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~d~vpVDdva~aii~a~~~ 318 (519)
+.+ ..+++++|+||+.|||+...+... .................+....+.+++...+++++++|++.++..++..
T Consensus 147 ~~~~~~~gl~~~ilR~~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~~~v~d~~~~~~~~~~~ 226 (315)
T d1e6ua_ 147 ESYNRQYGRDYRSVMPTNLYGPHDNFHPSNSHVIPALLRRFHEATAQKAPDVVVWGSGTPMREFLHVDDMAAASIHVMEL 226 (315)
T ss_dssp HHHHHHHCCEEEEEEECEEESTTCCCCTTCSSHHHHHHHHHHHHHHHTCSEEEEESCSCCEECEEEHHHHHHHHHHHHHS
T ss_pred HHHHHHhCCCEEEEeeccEECCCCCCCccccccceeeeccchhhhhccCCceEEcCCCceEEEEEEeehhHHHHHHhhhh
Confidence 987 458999999999999987643211 1111112223345556677778889999999999999999999998864
Q ss_pred hcc-----CCCCCcEEEecCCCCCchhHHH
Q 010075 319 HAK-----QPSDANIYHVGSSLRNPVTLGL 343 (519)
Q Consensus 319 ~~~-----~~~~~~iyni~s~~~~~i~~~~ 343 (519)
... ......++|++++...++..+.
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 256 (315)
T d1e6ua_ 227 AHEVWLENTQPMLSHINVGTGVDCTIRELA 256 (315)
T ss_dssp CHHHHHHTSBTTBCCEEESCSCCEEHHHHH
T ss_pred ccccccccccccccccccCCCcchHHHHHH
Confidence 321 1123568999998776654433
|
| >d1n7ha_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Thale-cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Thale-cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=99.94 E-value=9.2e-26 Score=226.72 Aligned_cols=248 Identities=14% Similarity=0.103 Sum_probs=170.5
Q ss_pred CCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEEe
Q 010075 12 NKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVP 91 (519)
Q Consensus 12 ~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v~ 91 (519)
.|++||||||||||++|++.|++.| ++|+++.|..+.... +++. .+ ... ....-...+.++.
T Consensus 1 ~k~~LVTGatGfiG~~lv~~Ll~~g---~~V~~~~r~~~~~~~-~~~~-~~---------~~~----~~~~~~~~~~~~~ 62 (339)
T d1n7ha_ 1 RKIALITGITGQDGSYLTEFLLGKG---YEVHGLIRRSSNFNT-QRIN-HI---------YID----PHNVNKALMKLHY 62 (339)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTT---CEEEEEECCCSSCCC-TTTT-TT---------C------------CCEEEEE
T ss_pred CCEEEEeCCccHHHHHHHHHHHHCc---CEEEEEECCCcccch-hhhh-hh---------hhh----hhhccccceEEEE
Confidence 3799999999999999999999999 688999996542110 0000 00 000 0001135688999
Q ss_pred ccCCCCCCCCChhhhHHHHh--cCccEEEEcCccCCcc---ccHHHHHHHhHHHHHHHHHHHHhcc----CCceEEEEec
Q 010075 92 GDISSEDLGLKDSNLKEELW--NELDIMVNSAAITKFD---ERYDVAFGINTLGVIHLVNFAKKCV----KLKVFVHVST 162 (519)
Q Consensus 92 gDl~~~~lgls~~~~~~~l~--~~vdiViH~Aa~v~f~---~~~~~~~~~Nv~gt~~ll~~a~~~~----~l~~~V~vST 162 (519)
+|+++ .+.....+ .++|+|||+||..... +........|+.|+.+++++++... ...++++.||
T Consensus 63 ~Di~~-------~~~~~~~~~~~~~D~Vih~Aa~~~~~~~~~~p~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~ss 135 (339)
T d1n7ha_ 63 ADLTD-------ASSLRRWIDVIKPDEVYNLAAQSHVAVSFEIPDYTADVVATGALRLLEAVRSHTIDSGRTVKYYQAGS 135 (339)
T ss_dssp CCTTC-------HHHHHHHHHHHCCSEEEECCSCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHHHHHHCCCCEEEEEEE
T ss_pred ccccC-------HHHHHHHHhhhccchhhhccccccccccccCccccccccccccchhhhhhhhcccccccceeeeeccc
Confidence 99995 33333443 3689999999987653 4566778999999999999987641 3457889999
Q ss_pred ceeecCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcHHHHHHHHHHHHH
Q 010075 163 AYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLM 242 (519)
Q Consensus 163 a~v~~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~Y~~sK~~aE~lv 242 (519)
+++++.....++|. .+. .|.+.|+.||..+|.++
T Consensus 136 ~~~~~~~~~~~~E~-----~~~-----------------------------------------~p~~~Y~~sK~~~E~~~ 169 (339)
T d1n7ha_ 136 SEMFGSTPPPQSET-----TPF-----------------------------------------HPRSPYAASKCAAHWYT 169 (339)
T ss_dssp GGGGTTSCSSBCTT-----SCC-----------------------------------------CCCSHHHHHHHHHHHHH
T ss_pred ceecccCCCCCCCC-----CCC-----------------------------------------CCcchhhHHHHHHHHHH
Confidence 99887765434333 222 46788999999999999
Q ss_pred HHh--hcCCcEEEEecCccccCCCCCCCcccccccccHHHHHHhhcC-CceeeccCCCceeeeeeHHHHHHHHHHHHHHh
Q 010075 243 QQS--KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQG-NLRCLVGETKVIMDVIPVDMVVNAMIVAMVAH 319 (519)
Q Consensus 243 ~~~--~~~lp~~IvRPs~V~g~~~~p~~gw~~~~~~~~~~i~~~~~g-~~~~~~~~~~~~~d~vpVDdva~aii~a~~~~ 319 (519)
..+ ..+++++++||+.|||+...+ ++.. ..+...+.....| ....+.+++.+.+|++||+|+|+++..++...
T Consensus 170 ~~~~~~~~~~~~ilR~~~vyGp~~~~--~~~~--~~i~~~~~~~~~~~~~~~~~g~~~~~rd~~~v~D~a~~~~~~~~~~ 245 (339)
T d1n7ha_ 170 VNYREAYGLFACNGILFNHESPRRGE--NFVT--RKITRALGRIKVGLQTKLFLGNLQASRDWGFAGDYVEAMWLMLQQE 245 (339)
T ss_dssp HHHHHHHCCEEEEEEECCEECTTSCT--TSHH--HHHHHHHHHHHHTSCCCEEESCTTCEEECEEHHHHHHHHHHHHTSS
T ss_pred HHHHHHhCCCEEEEEEccccCCCCCC--CCCc--chhhHHHHHHhcCCCCeEEeCCCCccccceeeehHHHHHHHHHhcC
Confidence 887 458999999999999986532 1111 1122222233333 34455688999999999999999999988643
Q ss_pred ccCCCCCcEEEecCCCCCch
Q 010075 320 AKQPSDANIYHVGSSLRNPV 339 (519)
Q Consensus 320 ~~~~~~~~iyni~s~~~~~i 339 (519)
. ...++++++...++
T Consensus 246 ~-----~~~~~~~~~~~~s~ 260 (339)
T d1n7ha_ 246 K-----PDDYVVATEEGHTV 260 (339)
T ss_dssp S-----CCEEEECCSCEEEH
T ss_pred C-----CCcccccccccccc
Confidence 2 24566666645443
|
| >d2bkaa1 c.2.1.2 (A:5-236) TAT-interacting protein TIP30 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: TAT-interacting protein TIP30 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.93 E-value=3.2e-25 Score=211.76 Aligned_cols=211 Identities=17% Similarity=0.139 Sum_probs=156.4
Q ss_pred cCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 010075 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (519)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (519)
|++|+|+|||||||+|++|+++|++.+ .+++|++++|++..... .....+..
T Consensus 12 m~~k~IlItGaTG~iG~~l~~~Ll~~g-~~~~v~~~~R~~~~~~~---------------------------~~~~~i~~ 63 (232)
T d2bkaa1 12 MQNKSVFILGASGETGRVLLKEILEQG-LFSKVTLIGRRKLTFDE---------------------------EAYKNVNQ 63 (232)
T ss_dssp HTCCEEEEECTTSHHHHHHHHHHHHHT-CCSEEEEEESSCCCCCS---------------------------GGGGGCEE
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHhCC-CCCEEEEEecChhhhcc---------------------------cccceeee
Confidence 577999999999999999999999987 45699999997644311 01256788
Q ss_pred EeccCCCCCCCCChhhhHHHHhcCccEEEEcCccCCccccHHHHHHHhHHHHHHHHHHHHhccCCceEEEEecceeecCc
Q 010075 90 VPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKFDERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAYVAGER 169 (519)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~~~vdiViH~Aa~v~f~~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V~vSTa~v~~~~ 169 (519)
+.+|+.+ .++. ...++++|+|||+|+......+.....++|+.++.+++++|++. ++++|||+||..++.
T Consensus 64 ~~~D~~~------~~~~-~~~~~~~d~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~-~v~~fi~~Ss~~~~~-- 133 (232)
T d2bkaa1 64 EVVDFEK------LDDY-ASAFQGHDVGFCCLGTTRGKAGAEGFVRVDRDYVLKSAELAKAG-GCKHFNLLSSKGADK-- 133 (232)
T ss_dssp EECCGGG------GGGG-GGGGSSCSEEEECCCCCHHHHHHHHHHHHHTHHHHHHHHHHHHT-TCCEEEEECCTTCCT--
T ss_pred eeecccc------cccc-cccccccccccccccccccccchhhhhhhcccccceeeeccccc-CccccccCCcccccc--
Confidence 8899884 2333 46778899999999987766777788999999999999999996 899999999987653
Q ss_pred CCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcHHHHHHHHHHHHHHHhhcCC
Q 010075 170 TGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLMQQSKENL 249 (519)
Q Consensus 170 ~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~Y~~sK~~aE~lv~~~~~~l 249 (519)
...+.|+.+|..+|+.+.+. ++
T Consensus 134 --------------------------------------------------------~~~~~Y~~~K~~~E~~l~~~--~~ 155 (232)
T d2bkaa1 134 --------------------------------------------------------SSNFLYLQVKGEVEAKVEEL--KF 155 (232)
T ss_dssp --------------------------------------------------------TCSSHHHHHHHHHHHHHHTT--CC
T ss_pred --------------------------------------------------------CccchhHHHHHHhhhccccc--cc
Confidence 23467999999999998874 45
Q ss_pred c-EEEEecCccccCCCCCCCcccccccccHHHHHHhhcCCceeeccCCCceeeeeeHHHHHHHHHHHHHHhccCCCCCcE
Q 010075 250 S-LVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMIVAMVAHAKQPSDANI 328 (519)
Q Consensus 250 p-~~IvRPs~V~g~~~~p~~gw~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~d~vpVDdva~aii~a~~~~~~~~~~~~i 328 (519)
+ ++|+|||.|+|+..+. .....++...... ...+......||++|+|++++.++.... ..++
T Consensus 156 ~~~~IlRP~~i~G~~~~~--------~~~~~~~~~~~~~-----~~~~~~~~~~I~~~dvA~a~i~~~~~~~----~~~~ 218 (232)
T d2bkaa1 156 DRYSVFRPGVLLCDRQES--------RPGEWLVRKFFGS-----LPDSWASGHSVPVVTVVRAMLNNVVRPR----DKQM 218 (232)
T ss_dssp SEEEEEECCEEECTTGGG--------SHHHHHHHHHHCS-----CCTTGGGGTEEEHHHHHHHHHHHHTSCC----CSSE
T ss_pred cceEEecCceeecCCCcC--------cHHHHHHHHHhhc-----cCCcccCCCeEEHHHHHHHHHHHHhcCc----cCCe
Confidence 4 8999999999986532 1111122222221 1222333456999999999998875432 2456
Q ss_pred EEecC
Q 010075 329 YHVGS 333 (519)
Q Consensus 329 yni~s 333 (519)
|.+.+
T Consensus 219 ~i~~~ 223 (232)
T d2bkaa1 219 ELLEN 223 (232)
T ss_dssp EEEEH
T ss_pred EEEcH
Confidence 66643
|
| >d1orra_ c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId: 90370]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: CDP-tyvelose-2-epimerase species: Salmonella typhi [TaxId: 90370]
Probab=99.93 E-value=1.2e-24 Score=217.79 Aligned_cols=256 Identities=17% Similarity=0.191 Sum_probs=168.9
Q ss_pred EEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEEecc
Q 010075 14 TILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVPGD 93 (519)
Q Consensus 14 ~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v~gD 93 (519)
+|||||||||||++|+++|++.| .+|+++.+-.... ..+++.. + . ...+++++.||
T Consensus 2 KILVTGatGfIGs~lv~~Ll~~g---~~V~~id~~~~~~-~~~~~~~-~---------~----------~~~~~~~i~~D 57 (338)
T d1orra_ 2 KLLITGGCGFLGSNLASFALSQG---IDLIVFDNLSRKG-ATDNLHW-L---------S----------SLGNFEFVHGD 57 (338)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTT---CEEEEEECCCSTT-HHHHHHH-H---------H----------TTCCCEEEECC
T ss_pred EEEEECCCcHHHHHHHHHHHHCc---CEEEEEECCCccc-chhHHHH-h---------h----------ccCCcEEEEcc
Confidence 69999999999999999999998 5778876433222 1222220 0 0 13678999999
Q ss_pred CCCCCCCCChhhhHHHHhc--CccEEEEcCccCCcc---ccHHHHHHHhHHHHHHHHHHHHhccCCceEEE-Eecceeec
Q 010075 94 ISSEDLGLKDSNLKEELWN--ELDIMVNSAAITKFD---ERYDVAFGINTLGVIHLVNFAKKCVKLKVFVH-VSTAYVAG 167 (519)
Q Consensus 94 l~~~~lgls~~~~~~~l~~--~vdiViH~Aa~v~f~---~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V~-vSTa~v~~ 167 (519)
+++ .+....+++ ++|+|||+||.+... .+....+++|+.||.+|+++|.+. +.+++++ .|++.+++
T Consensus 58 i~~-------~~~l~~~~~~~~~d~Vih~aa~~~~~~~~~~~~~~~~~Nv~gt~nll~~~~~~-~~~~~i~~sS~~~~~~ 129 (338)
T d1orra_ 58 IRN-------KNDVTRLITKYMPDSCFHLAGQVAMTTSIDNPCMDFEINVGGTLNLLEAVRQY-NSNCNIIYSSTNKVYG 129 (338)
T ss_dssp TTC-------HHHHHHHHHHHCCSEEEECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHH-CTTCEEEEEEEGGGGT
T ss_pred cCC-------HHHHHHHHHhcCCceEEeecccccccccccChHHHHHHHHHHHHHHHHhhhcc-cccccccccccccccc
Confidence 995 333345554 479999999998654 356788999999999999999997 5555554 44455444
Q ss_pred CcCC-eeecc--cCCCC-CCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcHHHHHHHHHHHHHH
Q 010075 168 ERTG-LILEN--PLDGA-SGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLMQ 243 (519)
Q Consensus 168 ~~~~-~i~E~--~~~e~-~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~Y~~sK~~aE~lv~ 243 (519)
.... ...+. ..+.. .+.. ........+.+.|+.+|..+|.++.
T Consensus 130 ~~~~~~~~~~~~~~~~~~~~~~---------------------------------~~~~~~~~~~~~y~~~k~~~e~~~~ 176 (338)
T d1orra_ 130 DLEQYKYNETETRYTCVDKPNG---------------------------------YDESTQLDFHSPYGCSKGAADQYML 176 (338)
T ss_dssp TCTTSCEEECSSCEEETTCTTC---------------------------------BCTTSCCCCCHHHHHHHHHHHHHHH
T ss_pred cccccccccccccccccccccC---------------------------------cccCCccccccccccccchhhhhhh
Confidence 3321 11111 00000 0000 0000112456789999999999988
Q ss_pred Hh--hcCCcEEEEecCccccCCCCCCCcccccccccHHHHH-----HhhcCCceeeccCCCceeeeeeHHHHHHHHHHHH
Q 010075 244 QS--KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFV-----ASAQGNLRCLVGETKVIMDVIPVDMVVNAMIVAM 316 (519)
Q Consensus 244 ~~--~~~lp~~IvRPs~V~g~~~~p~~gw~~~~~~~~~~i~-----~~~~g~~~~~~~~~~~~~d~vpVDdva~aii~a~ 316 (519)
.. ..+....++|++.++++...+.... .....++. ....+....++|+|...+|++||+|+|++++.++
T Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~r~~~~v~D~~~~~~~~l 252 (338)
T d1orra_ 177 DYARIFGLNTVVFRHSSMYGGRQFATYDQ----GWVGWFCQKAVEIKNGINKPFTISGNGKQVRDVLHAEDMISLYFTAL 252 (338)
T ss_dssp HHHHHHCCEEEEEEECCEECTTCCCBTTB----CHHHHHHHHHHHHHTTCCCCEEEESSSCCEEECEEHHHHHHHHHHHH
T ss_pred hhhhccCcccccccccceeeccccccccc----cccchhhHHHHHHHhccCCceEEeCCCceeEeeecccchhhHHHHHH
Confidence 76 5689999999999998765322111 11122222 2234666778899999999999999999999998
Q ss_pred HHhccCCCCCcEEEecCCCCCchh
Q 010075 317 VAHAKQPSDANIYHVGSSLRNPVT 340 (519)
Q Consensus 317 ~~~~~~~~~~~iyni~s~~~~~i~ 340 (519)
...... .+++||+..+...+++
T Consensus 253 ~~~~~~--~~~~~~i~~~~~~~~s 274 (338)
T d1orra_ 253 ANVSKI--RGNAFNIGGTIVNSLS 274 (338)
T ss_dssp HTHHHH--TTCEEEESSCGGGEEE
T ss_pred hccccc--cCcccccccccccccc
Confidence 753322 2579999776555544
|
| >d1rkxa_ c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia pseudotuberculosis [TaxId: 633]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: CDP-glucose-4,6-dehydratase species: Yersinia pseudotuberculosis [TaxId: 633]
Probab=99.93 E-value=2.9e-24 Score=217.17 Aligned_cols=231 Identities=13% Similarity=0.137 Sum_probs=168.9
Q ss_pred hhhcCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCc
Q 010075 7 VEFLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEK 86 (519)
Q Consensus 7 ~~~~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~ 86 (519)
.+||+||+|||||||||||++|+++|++.| .+|+++.|.........+. . ...++
T Consensus 3 ~~~~~~KkILVTG~tGfIGs~lv~~Ll~~g---~~V~~~~r~~~~~~~~~~~------------~----------~~~~~ 57 (356)
T d1rkxa_ 3 NSFWQGKRVFVTGHTGFKGGWLSLWLQTMG---ATVKGYSLTAPTVPSLFET------------A----------RVADG 57 (356)
T ss_dssp HHHHTTCEEEEETTTSHHHHHHHHHHHHTT---CEEEEEESSCSSSSCHHHH------------T----------TTTTT
T ss_pred hhhhCCCEEEEECCCCHHHHHHHHHHHHCC---CEEEEEECCCCccHHHHhh------------h----------hcccC
Confidence 479999999999999999999999999999 5789999987654321110 0 01367
Q ss_pred eEEEeccCCCCCCCCChhhhHHHHhc--CccEEEEcCccCCcc---ccHHHHHHHhHHHHHHHHHHHHhccCCceEEEEe
Q 010075 87 ITFVPGDISSEDLGLKDSNLKEELWN--ELDIMVNSAAITKFD---ERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVS 161 (519)
Q Consensus 87 v~~v~gDl~~~~lgls~~~~~~~l~~--~vdiViH~Aa~v~f~---~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V~vS 161 (519)
++++.||+++ .+...++.. .+|+|+|+||..... +.......+|+.|+.+++++|++.+..+.+++.|
T Consensus 58 i~~~~~Dl~d-------~~~l~~~~~~~~~~~v~~~aa~~~~~~~~~~~~~~~~~Nv~g~~n~l~~~~~~~~~~~~~~~s 130 (356)
T d1rkxa_ 58 MQSEIGDIRD-------QNKLLESIREFQPEIVFHMAAQPLVRLSYSEPVETYSTNVMGTVYLLEAIRHVGGVKAVVNIT 130 (356)
T ss_dssp SEEEECCTTC-------HHHHHHHHHHHCCSEEEECCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHHCCCCEEEEEC
T ss_pred CeEEEeeccC-------hHhhhhhhhhchhhhhhhhhccccccccccCCccccccccccchhhhhhhhcccccccccccc
Confidence 9999999995 333334443 689999999986542 4567789999999999999999986777788877
Q ss_pred cceeecCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcHHHHHHHHHHHH
Q 010075 162 TAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEML 241 (519)
Q Consensus 162 Ta~v~~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~Y~~sK~~aE~l 241 (519)
|+.++...... .+..++.+ ..+.+.|+.+|..+|..
T Consensus 131 ~~~~~~~~~~~---~~~~~~~~-----------------------------------------~~p~~~y~~~k~~~e~~ 166 (356)
T d1rkxa_ 131 SDKCYDNKEWI---WGYRENEA-----------------------------------------MGGYDPYSNSKGCAELV 166 (356)
T ss_dssp CGGGBCCCCSS---SCBCTTSC-----------------------------------------BCCSSHHHHHHHHHHHH
T ss_pred ccccccccccc---cccccccc-----------------------------------------cCCCCccccccccchhh
Confidence 77766544321 11111111 14567899999999988
Q ss_pred HHHh-----------hcCCcEEEEecCccccCCCCCCCcccccccccHHHHHHhhcCCceeeccCCCceeeeeeHHHHHH
Q 010075 242 MQQS-----------KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVN 310 (519)
Q Consensus 242 v~~~-----------~~~lp~~IvRPs~V~g~~~~p~~gw~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~d~vpVDdva~ 310 (519)
+..+ ..+++++++||+.|||+...+.. ..+..++... .+....+.+.+.+.+++++|+|+|.
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~r~~~vyGp~~~~~~------~~i~~~~~~~-~~~~~~~~~~~~~~~~~~~v~D~~~ 239 (356)
T d1rkxa_ 167 TSSYRNSFFNPANYGQHGTAVATVRAGNVIGGGDWALD------RIVPDILRAF-EQSQPVIIRNPHAIRPWQHVLEPLS 239 (356)
T ss_dssp HHHHHHHHSCGGGHHHHCCEEEEEECCCEECTTCCCSS------CHHHHHHHHH-HTTCCEECSCTTCEECCEETHHHHH
T ss_pred hhHHhhhcccchhccccCceEEeccCCCeeCCCcchhh------HHHHHHHHHH-hCCCceEEeeccccccccccccccc
Confidence 8753 24688999999999998753221 2233344444 4444556788999999999999999
Q ss_pred HHHHHHHHhc
Q 010075 311 AMIVAMVAHA 320 (519)
Q Consensus 311 aii~a~~~~~ 320 (519)
+++.++....
T Consensus 240 a~~~~~~~~~ 249 (356)
T d1rkxa_ 240 GYLLLAQKLY 249 (356)
T ss_dssp HHHHHHHHHH
T ss_pred hhhhhhhhhc
Confidence 9999988654
|
| >d1vl0a_ c.2.1.2 (A:) DTDP-4-dehydrorhamnose reductase RfbD {Clostridium acetobutylicum [TaxId: 1488]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: DTDP-4-dehydrorhamnose reductase RfbD species: Clostridium acetobutylicum [TaxId: 1488]
Probab=99.88 E-value=9e-22 Score=191.64 Aligned_cols=208 Identities=19% Similarity=0.225 Sum_probs=155.1
Q ss_pred CEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEEec
Q 010075 13 KTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVPG 92 (519)
Q Consensus 13 k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v~g 92 (519)
|+|||||||||||++|+++|...| ++|+++.|++ +
T Consensus 2 MKIlItGasGfiG~~l~~~L~~~g---~~Vi~~~r~~------------------------------------------~ 36 (281)
T d1vl0a_ 2 MKILITGANGQLGREIQKQLKGKN---VEVIPTDVQD------------------------------------------L 36 (281)
T ss_dssp EEEEEESTTSHHHHHHHHHHTTSS---EEEEEECTTT------------------------------------------C
T ss_pred CEEEEECCCCHHHHHHHHHHHhCC---CEEEEeechh------------------------------------------c
Confidence 689999999999999999999988 5778776642 3
Q ss_pred cCCCCCCCCChhhhHHHHhc--CccEEEEcCccCCcc---ccHHHHHHHhHHHHHHHHHHHHhccCCceEEEEecceeec
Q 010075 93 DISSEDLGLKDSNLKEELWN--ELDIMVNSAAITKFD---ERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAYVAG 167 (519)
Q Consensus 93 Dl~~~~lgls~~~~~~~l~~--~vdiViH~Aa~v~f~---~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V~vSTa~v~~ 167 (519)
|+.+ .+..+..++ ++|+|||+|+....+ ...+.....|+.++..+.+.+... ...+++.||..+++
T Consensus 37 D~~d-------~~~~~~~l~~~~~d~vih~a~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~--~~~~~~~ss~~v~~ 107 (281)
T d1vl0a_ 37 DITN-------VLAVNKFFNEKKPNVVINCAAHTAVDKCEEQYDLAYKINAIGPKNLAAAAYSV--GAEIVQISTDYVFD 107 (281)
T ss_dssp CTTC-------HHHHHHHHHHHCCSEEEECCCCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHH--TCEEEEEEEGGGSC
T ss_pred cCCC-------HHHHHHHHHHcCCCEEEeeccccccccccccchhhcccccccccccccccccc--cccccccccceeee
Confidence 5653 333334444 689999999987643 456777899999999999988873 45788888888887
Q ss_pred CcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcHHHHHHHHHHHHHHHhhc
Q 010075 168 ERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLMQQSKE 247 (519)
Q Consensus 168 ~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~Y~~sK~~aE~lv~~~~~ 247 (519)
.... .++.|..+. .+.+.|+.+|..+|.++++ .
T Consensus 108 ~~~~----~~~~e~~~~-----------------------------------------~~~~~~~~~k~~~e~~~~~--~ 140 (281)
T d1vl0a_ 108 GEAK----EPITEFDEV-----------------------------------------NPQSAYGKTKLEGENFVKA--L 140 (281)
T ss_dssp SCCS----SCBCTTSCC-----------------------------------------CCCSHHHHHHHHHHHHHHH--H
T ss_pred cccc----ccccccccc-----------------------------------------cchhhhhhhhhHHHHHHHH--h
Confidence 5431 222222221 4567899999999999987 4
Q ss_pred CCcEEEEecCccccCCCCCCCcccccccccHHHHHHhhcCCceeeccCCCceeeeeeHHHHHHHHHHHHHHhccCCCCCc
Q 010075 248 NLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMIVAMVAHAKQPSDAN 327 (519)
Q Consensus 248 ~lp~~IvRPs~V~g~~~~p~~gw~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~d~vpVDdva~aii~a~~~~~~~~~~~~ 327 (519)
+.+.+|+||+.|||+.. +....++..+..+....+.+ +..+++++++|+|+++..++.... .+
T Consensus 141 ~~~~~i~R~~~vyG~~~----------~~~~~~~~~~~~~~~~~~~~--~~~~~~i~v~D~~~~~~~~~~~~~-----~g 203 (281)
T d1vl0a_ 141 NPKYYIVRTAWLYGDGN----------NFVKTMINLGKTHDELKVVH--DQVGTPTSTVDLARVVLKVIDEKN-----YG 203 (281)
T ss_dssp CSSEEEEEECSEESSSS----------CHHHHHHHHHHHCSEEEEES--SCEECCEEHHHHHHHHHHHHHHTC-----CE
T ss_pred CCCccccceeEEeCCCc----------ccccchhhhhccCCceeecC--Cceeccchhhhhhhhhhhhhhhcc-----cC
Confidence 67899999999999864 22334555666666555554 588999999999999999997532 35
Q ss_pred EEEecCCCCCc
Q 010075 328 IYHVGSSLRNP 338 (519)
Q Consensus 328 iyni~s~~~~~ 338 (519)
+||++++...+
T Consensus 204 ~~~~~~~~~~s 214 (281)
T d1vl0a_ 204 TFHCTCKGICS 214 (281)
T ss_dssp EEECCCBSCEE
T ss_pred ceeEeCCCccc
Confidence 89999986554
|
| >d1eq2a_ c.2.1.2 (A:) ADP-L-glycero-D-mannoheptose 6-epimerase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: ADP-L-glycero-D-mannoheptose 6-epimerase species: Escherichia coli [TaxId: 562]
Probab=99.87 E-value=3.2e-21 Score=189.50 Aligned_cols=243 Identities=15% Similarity=0.163 Sum_probs=151.9
Q ss_pred EEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEE-ecc
Q 010075 15 ILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFV-PGD 93 (519)
Q Consensus 15 VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v-~gD 93 (519)
|||||||||||++|+++|++.|. ++|+++.+-..+... .++. + ....... ..|
T Consensus 2 ILITGgsGfIGs~lv~~L~~~g~--~~V~~~d~~~~~~~~-~~~~-------------~----------~~~~~~~~~~~ 55 (307)
T d1eq2a_ 2 IIVTGGAGFIGSNIVKALNDKGI--TDILVVDNLKDGTKF-VNLV-------------D----------LNIADYMDKED 55 (307)
T ss_dssp EEEETTTSHHHHHHHHHHHTTTC--CCEEEEECCSSGGGG-HHHH-------------T----------SCCSEEEEHHH
T ss_pred EEEecCccHHHHHHHHHHHhCCC--CeEEEEECCCCcchh-hccc-------------c----------cchhhhccchH
Confidence 89999999999999999999884 356666433222211 1111 0 0111111 111
Q ss_pred CCCCCCCCChhhhHHHHhcCccEEEEcCccCCc-cccHHHHHHHhHHHHHHHHHHHHhccCCceEEEEecceeecCcCC-
Q 010075 94 ISSEDLGLKDSNLKEELWNELDIMVNSAAITKF-DERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAYVAGERTG- 171 (519)
Q Consensus 94 l~~~~lgls~~~~~~~l~~~vdiViH~Aa~v~f-~~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V~vSTa~v~~~~~~- 171 (519)
+. +..........+++|+|+||.... ..+.+.....|+.++.+++++++.. +++ +++.||..+++....
T Consensus 56 ~~-------~~~~~~~~~~~~~~i~~~aa~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-~i~-~v~~ss~~~~~~~~~~ 126 (307)
T d1eq2a_ 56 FL-------IQIMAGEEFGDVEAIFHEGACSSTTEWDGKYMMDNNYQYSKELLHYCLER-EIP-FLYASSAATYGGRTSD 126 (307)
T ss_dssp HH-------HHHHTTCCCSSCCEEEECCSCCCTTCCCHHHHHHHTHHHHHHHHHHHHHH-TCC-EEEEEEGGGGTTCCSC
T ss_pred HH-------HHHhhhhcccchhhhhhhcccccccccccccccccccccccccccccccc-ccc-cccccccccccccccc
Confidence 11 111101122468999999997654 3566777888999999999999885 665 666666666654321
Q ss_pred eeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcHHHHHHHHHHHHHHHh--hcCC
Q 010075 172 LILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLMQQS--KENL 249 (519)
Q Consensus 172 ~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~Y~~sK~~aE~lv~~~--~~~l 249 (519)
..+|.. ...+.+.|+.+|..+|.++..+ ..++
T Consensus 127 ~~~~~~----------------------------------------------~~~~~~~Y~~~K~~~e~~~~~~~~~~~~ 160 (307)
T d1eq2a_ 127 FIESRE----------------------------------------------YEKPLNVYGYSKFLFDEYVRQILPEANS 160 (307)
T ss_dssp BCSSGG----------------------------------------------GCCCSSHHHHHHHHHHHHHHHHGGGCSS
T ss_pred cccccc----------------------------------------------ccccccccccccchhhhhcccccccccc
Confidence 111111 1156789999999999999987 5689
Q ss_pred cEEEEecCccccCCCCCCCcccccccccHHHHHHhhcCCcee-eccCCCceeeeeeHHHHHHHHHHHHHHhccCCCCCcE
Q 010075 250 SLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRC-LVGETKVIMDVIPVDMVVNAMIVAMVAHAKQPSDANI 328 (519)
Q Consensus 250 p~~IvRPs~V~g~~~~p~~gw~~~~~~~~~~i~~~~~g~~~~-~~~~~~~~~d~vpVDdva~aii~a~~~~~~~~~~~~i 328 (519)
+++++||+.|||+...+- ++.. .....++..+..|.... ..+++...++++|++|+++++..++.... ..+
T Consensus 161 ~~~~~r~~~vyGp~~~~~-~~~~--~~~~~~~~~~~~~~~~~~~~g~~~~~r~~~~v~d~~~~~~~~~~~~~-----~~~ 232 (307)
T d1eq2a_ 161 QIVGFRYFNVYGPREGHK-GSMA--SVAFHLNTQLNNGESPKLFEGSENFKRDFVYVGDVADVNLWFLENGV-----SGI 232 (307)
T ss_dssp CEEEEEECEEESSSCGGG-GGGS--CHHHHHHHHHHC-------------CBCEEEHHHHHHHHHHHHHHCC-----CEE
T ss_pred ccccccceeEeecccccc-cccc--ccccccccccccccceeeecCccceeeeeeecccHHHHHHHHhhhcc-----ccc
Confidence 999999999999876321 1111 12233445555565433 35788889999999999999998886432 468
Q ss_pred EEecCCCCCchhHHHHHH
Q 010075 329 YHVGSSLRNPVTLGLQVA 346 (519)
Q Consensus 329 yni~s~~~~~i~~~~~~~ 346 (519)
||++++...++..++..+
T Consensus 233 ~~~~~~~~~si~~i~~~i 250 (307)
T d1eq2a_ 233 FNLGTGRAESFQAVADAT 250 (307)
T ss_dssp EEESCSCCBCHHHHHHHC
T ss_pred cccccccchhHHHHHHHH
Confidence 999999887766655544
|
| >d1hdoa_ c.2.1.2 (A:) Biliverdin IX beta reductase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Biliverdin IX beta reductase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.87 E-value=1.9e-21 Score=181.67 Aligned_cols=191 Identities=13% Similarity=0.096 Sum_probs=144.7
Q ss_pred cCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 010075 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (519)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (519)
|..|+|+|||||||+|++++++|++.| ++|.+++|+..... .....++++
T Consensus 1 m~~kkIlV~GatG~iG~~v~~~Ll~~g---~~V~~~~R~~~~~~---------------------------~~~~~~~~~ 50 (205)
T d1hdoa_ 1 MAVKKIAIFGATGQTGLTTLAQAVQAG---YEVTVLVRDSSRLP---------------------------SEGPRPAHV 50 (205)
T ss_dssp CCCCEEEEESTTSHHHHHHHHHHHHTT---CEEEEEESCGGGSC---------------------------SSSCCCSEE
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCc---CEEEEEEcChhhcc---------------------------ccccccccc
Confidence 456899999999999999999999998 68899999754321 112367899
Q ss_pred EeccCCCCCCCCChhhhHHHHhcCccEEEEcCccCCccccHHHHHHHhHHHHHHHHHHHHhccCCceEEEEecceeecCc
Q 010075 90 VPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKFDERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAYVAGER 169 (519)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~~~vdiViH~Aa~v~f~~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V~vSTa~v~~~~ 169 (519)
+.||+++ .+...+.+.++|+|||++|......+ ..++..+++++++++++. ++++||++||+.++.+.
T Consensus 51 ~~gD~~d-------~~~l~~al~~~d~vi~~~g~~~~~~~----~~~~~~~~~~l~~aa~~~-~v~r~i~~ss~~~~~~~ 118 (205)
T d1hdoa_ 51 VVGDVLQ-------AADVDKTVAGQDAVIVLLGTRNDLSP----TTVMSEGARNIVAAMKAH-GVDKVVACTSAFLLWDP 118 (205)
T ss_dssp EESCTTS-------HHHHHHHHTTCSEEEECCCCTTCCSC----CCHHHHHHHHHHHHHHHH-TCCEEEEECCGGGTSCT
T ss_pred ccccccc-------hhhHHHHhcCCCEEEEEeccCCchhh----hhhhHHHHHHHHHHHHhc-CCCeEEEEeeeeccCCC
Confidence 9999995 34445778899999999987543322 245778999999999996 89999999999887653
Q ss_pred CCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcHHHHHHHHHHHHHHHhhcCC
Q 010075 170 TGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLMQQSKENL 249 (519)
Q Consensus 170 ~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~Y~~sK~~aE~lv~~~~~~l 249 (519)
.. + + .....|...|..+|+++++ .++
T Consensus 119 ~~------~----~------------------------------------------~~~~~~~~~~~~~e~~l~~--~~~ 144 (205)
T d1hdoa_ 119 TK------V----P------------------------------------------PRLQAVTDDHIRMHKVLRE--SGL 144 (205)
T ss_dssp TC------S----C------------------------------------------GGGHHHHHHHHHHHHHHHH--TCS
T ss_pred cc------c----c------------------------------------------ccccccchHHHHHHHHHHh--cCC
Confidence 21 0 0 1123588899999999886 789
Q ss_pred cEEEEecCccccCCCCCCCcccccccccHHHHHHhhcCCceeeccCCCceeeeeeHHHHHHHHHHHHHH
Q 010075 250 SLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMIVAMVA 318 (519)
Q Consensus 250 p~~IvRPs~V~g~~~~p~~gw~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~d~vpVDdva~aii~a~~~ 318 (519)
+++|+||+.+++... . |. ..+..++.....+|+++|+|++++.++..
T Consensus 145 ~~tiirp~~~~~~~~---~------------------~~-~~~~~~~~~~~~~i~~~DvA~~~~~~l~~ 191 (205)
T d1hdoa_ 145 KYVAVMPPHIGDQPL---T------------------GA-YTVTLDGRGPSRVISKHDLGHFMLRCLTT 191 (205)
T ss_dssp EEEEECCSEEECCCC---C------------------SC-CEEESSSCSSCSEEEHHHHHHHHHHTTSC
T ss_pred ceEEEecceecCCCC---c------------------cc-EEEeeCCCCCCCcCCHHHHHHHHHHHhCC
Confidence 999999999876422 1 11 12234556677899999999999998864
|
| >d2a35a1 c.2.1.2 (A:4-215) Hypothetical protein PA4017 {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein PA4017 species: Pseudomonas aeruginosa [TaxId: 287]
Probab=99.86 E-value=5.6e-22 Score=186.02 Aligned_cols=189 Identities=17% Similarity=0.114 Sum_probs=134.0
Q ss_pred CCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEEe
Q 010075 12 NKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVP 91 (519)
Q Consensus 12 ~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v~ 91 (519)
.|+|||||||||||++|+++|++.+.. .+|+++.|++... ..++....
T Consensus 2 ~KkIlItGatG~iG~~lv~~L~~~~~~-~~v~~~~r~~~~~-------------------------------~~~~~~~~ 49 (212)
T d2a35a1 2 PKRVLLAGATGLTGEHLLDRILSEPTL-AKVIAPARKALAE-------------------------------HPRLDNPV 49 (212)
T ss_dssp CCEEEEECTTSHHHHHHHHHHHHCTTC-CEEECCBSSCCCC-------------------------------CTTEECCB
T ss_pred CCEEEEECCCcHHHHHHHHHHHhCCCe-EEEEEEeCCchhh-------------------------------cccccccc
Confidence 489999999999999999999998743 4788888865332 13444444
Q ss_pred ccCCCCCCCCChhhhHHHHhcCccEEEEcCccCCc-cccHHHHHHHhHHHHHHHHHHHHhccCCceEEEEecceeecCcC
Q 010075 92 GDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF-DERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAYVAGERT 170 (519)
Q Consensus 92 gDl~~~~lgls~~~~~~~l~~~vdiViH~Aa~v~f-~~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V~vSTa~v~~~~~ 170 (519)
+|+. +....+...+|+||||+|.... ........+.|+.++.+++++|++. ++++|+|+||+.+++.
T Consensus 50 ~d~~---------~~~~~~~~~~d~vi~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~-~v~~~i~~Ss~~~~~~-- 117 (212)
T d2a35a1 50 GPLA---------ELLPQLDGSIDTAFCCLGTTIKEAGSEEAFRAVDFDLPLAVGKRALEM-GARHYLVVSALGADAK-- 117 (212)
T ss_dssp SCHH---------HHGGGCCSCCSEEEECCCCCHHHHSSHHHHHHHHTHHHHHHHHHHHHT-TCCEEEEECCTTCCTT--
T ss_pred cchh---------hhhhccccchheeeeeeeeeccccccccccccchhhhhhhcccccccc-cccccccccccccccc--
Confidence 4433 2222445579999999987633 3445677899999999999999995 9999999999876542
Q ss_pred CeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcHHHHHHHHHHHHHHHhhcCC-
Q 010075 171 GLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLMQQSKENL- 249 (519)
Q Consensus 171 ~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~Y~~sK~~aE~lv~~~~~~l- 249 (519)
..+.|..+|..+|+.+.+ .++
T Consensus 118 --------------------------------------------------------~~~~y~~~K~~~E~~l~~--~~~~ 139 (212)
T d2a35a1 118 --------------------------------------------------------SSIFYNRVKGELEQALQE--QGWP 139 (212)
T ss_dssp --------------------------------------------------------CSSHHHHHHHHHHHHHTT--SCCS
T ss_pred --------------------------------------------------------cccchhHHHHHHhhhccc--cccc
Confidence 246799999999998876 355
Q ss_pred cEEEEecCccccCCCCCCCcccccccccHHHHHHhhcCCceeeccCCCceeeeeeHHHHHHHHHHHHHH
Q 010075 250 SLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMIVAMVA 318 (519)
Q Consensus 250 p~~IvRPs~V~g~~~~p~~gw~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~d~vpVDdva~aii~a~~~ 318 (519)
+++|+||++|||+.......+. ........++ .....||++|+|++++.++..
T Consensus 140 ~~~I~Rp~~v~G~~~~~~~~~~------------~~~~~~~~~~----~~~~~i~v~DvA~ai~~~~~~ 192 (212)
T d2a35a1 140 QLTIARPSLLFGPREEFRLAEI------------LAAPIARILP----GKYHGIEACDLARALWRLALE 192 (212)
T ss_dssp EEEEEECCSEESTTSCEEGGGG------------TTCCCC--------CHHHHHHHHHHHHHHHHHHTC
T ss_pred cceeeCCcceeCCcccccHHHH------------HHHHHhhccC----CCCcEEEHHHHHHHHHHHHcC
Confidence 4999999999998764211100 0011111111 123459999999999998853
|
| >d1n2sa_ c.2.1.2 (A:) dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {Salmonella enterica serovar typhimurium [TaxId: 90371]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) species: Salmonella enterica serovar typhimurium [TaxId: 90371]
Probab=99.85 E-value=2.9e-20 Score=181.84 Aligned_cols=217 Identities=21% Similarity=0.185 Sum_probs=146.1
Q ss_pred CEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEEec
Q 010075 13 KTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVPG 92 (519)
Q Consensus 13 k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v~g 92 (519)
|+|||||||||||++|++.|++.| .++.+.+.... +.+
T Consensus 1 MKILItG~tGfiG~~l~~~L~~~g----~~v~~~~~~~~--------------------------------------~~~ 38 (298)
T d1n2sa_ 1 MNILLFGKTGQVGWELQRSLAPVG----NLIALDVHSKE--------------------------------------FCG 38 (298)
T ss_dssp CEEEEECTTSHHHHHHHHHTTTTS----EEEEECTTCSS--------------------------------------SCC
T ss_pred CEEEEECCCCHHHHHHHHHHHhCC----CEEEEECCCcc--------------------------------------ccC
Confidence 689999999999999999999876 34444443211 257
Q ss_pred cCCCCCCCCChhhhHHHHhc--CccEEEEcCccCCc---cccHHHHHHHhHHHHHHHHHHHHhccCCceEEEEecceeec
Q 010075 93 DISSEDLGLKDSNLKEELWN--ELDIMVNSAAITKF---DERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAYVAG 167 (519)
Q Consensus 93 Dl~~~~lgls~~~~~~~l~~--~vdiViH~Aa~v~f---~~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V~vSTa~v~~ 167 (519)
|+++ .+..+.+++ ++|+|||+||.+.. ..........|+.++.+++++|++. + .+++++||+.+++
T Consensus 39 Dl~~-------~~~~~~~i~~~~~D~Vih~Aa~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~-~~~~~~ss~~~~~ 109 (298)
T d1n2sa_ 39 DFSN-------PKGVAETVRKLRPDVIVNAAAHTAVDKAESEPELAQLLNATSVEAIAKAANET-G-AWVVHYSTDYVFP 109 (298)
T ss_dssp CTTC-------HHHHHHHHHHHCCSEEEECCCCCCHHHHTTCHHHHHHHHTHHHHHHHHHHTTT-T-CEEEEEEEGGGSC
T ss_pred cCCC-------HHHHHHHHHHcCCCEEEEecccccccccccCccccccccccccccchhhhhcc-c-ccccccccccccc
Confidence 8874 333445554 57999999998764 3566778999999999999999885 4 5689999998887
Q ss_pred CcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcHHHHHHHHHHHHHHHhhc
Q 010075 168 ERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLMQQSKE 247 (519)
Q Consensus 168 ~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~Y~~sK~~aE~lv~~~~~ 247 (519)
...+ .++.|..+. .+.+.|+.+|..+|..+.+...
T Consensus 110 ~~~~----~~~~E~~~~-----------------------------------------~p~~~y~~~k~~~e~~~~~~~~ 144 (298)
T d1n2sa_ 110 GTGD----IPWQETDAT-----------------------------------------SPLNVYGKTKLAGEKALQDNCP 144 (298)
T ss_dssp CCTT----CCBCTTSCC-----------------------------------------CCSSHHHHHHHHHHHHHHHHCS
T ss_pred CCCC----CCCcccccc-----------------------------------------CCCchHhhhhhhhhhhHHhhhc
Confidence 5432 223222222 4568899999999999987532
Q ss_pred CCcEEEEecCccccCCCCCCCcccccccccHHHHHHhhcCCceeeccCCCceeeeeeHHHHHHHHHHHHHHhccCCCCCc
Q 010075 248 NLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMIVAMVAHAKQPSDAN 327 (519)
Q Consensus 248 ~lp~~IvRPs~V~g~~~~p~~gw~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~d~vpVDdva~aii~a~~~~~~~~~~~~ 327 (519)
...++|++..++.... +....+...+..+..... .+....++++++|+++++..++..........+
T Consensus 145 --~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~d~~~~~~~~i~~~~~~~~~~~ 211 (298)
T d1n2sa_ 145 --KHLIFRTSWVYAGKGN---------NFAKTMLRLAKERQTLSV--INDQYGAPTGAELLADCTAHAIRVALNKPEVAG 211 (298)
T ss_dssp --SEEEEEECSEECSSSC---------CHHHHHHHHHHHCSEEEE--ECSCEECCEEHHHHHHHHHHHHHHHHHCGGGCE
T ss_pred --ccccccccceeeccCC---------ccchhhhhhhcccceeec--ccceeecccccchHHHHHHHHHhhhhccccccc
Confidence 3455665555543321 111222333333333333 345678999999999999888764333222368
Q ss_pred EEEecCCCCCc
Q 010075 328 IYHVGSSLRNP 338 (519)
Q Consensus 328 iyni~s~~~~~ 338 (519)
+||++++...+
T Consensus 212 ~~n~~~~~~~~ 222 (298)
T d1n2sa_ 212 LYHLVAGGTTT 222 (298)
T ss_dssp EEECCCBSCEE
T ss_pred cccccCCCcee
Confidence 99999875544
|
| >d1qyda_ c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {Giant arborvitae (Thuja plicata) [TaxId: 3316]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Pinoresinol-lariciresinol reductase species: Giant arborvitae (Thuja plicata) [TaxId: 3316]
Probab=99.85 E-value=1.5e-20 Score=184.94 Aligned_cols=234 Identities=11% Similarity=0.089 Sum_probs=161.4
Q ss_pred CCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEEe
Q 010075 12 NKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVP 91 (519)
Q Consensus 12 ~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v~ 91 (519)
.++|||||||||+|++|+++|+++| ++|++++|+.........-. +.. ....+++++.
T Consensus 3 k~KILVtGatG~iG~~l~~~L~~~G---~~V~~~~R~~~~~~~~~~~~-----------~~~--------~~~~~v~~v~ 60 (312)
T d1qyda_ 3 KSRVLIVGGTGYIGKRIVNASISLG---HPTYVLFRPEVVSNIDKVQM-----------LLY--------FKQLGAKLIE 60 (312)
T ss_dssp CCCEEEESTTSTTHHHHHHHHHHTT---CCEEEECCSCCSSCHHHHHH-----------HHH--------HHTTTCEEEC
T ss_pred CCEEEEECCCCHHHHHHHHHHHhCC---CEEEEEECCCcccchhHHHH-----------Hhh--------hccCCcEEEE
Confidence 5679999999999999999999998 57799999876554321100 000 0136789999
Q ss_pred ccCCCCCCCCChhhhHHHHhcCccEEEEcCccCCccccHHHHHHHhHHHHHHHHHHHHhccCCceEEEEecceeecCcCC
Q 010075 92 GDISSEDLGLKDSNLKEELWNELDIMVNSAAITKFDERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAYVAGERTG 171 (519)
Q Consensus 92 gDl~~~~lgls~~~~~~~l~~~vdiViH~Aa~v~f~~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V~vSTa~v~~~~~~ 171 (519)
+|+.+ .+.......+.++++|+++.... ..|..++.++++.|++. ...++++.||..++.....
T Consensus 61 ~d~~d-------~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~l~~a~~~-~~~~~v~~Ss~g~~~~~~~ 124 (312)
T d1qyda_ 61 ASLDD-------HQRLVDALKQVDVVISALAGGVL--------SHHILEQLKLVEAIKEA-GNIKRFLPSEFGMDPDIME 124 (312)
T ss_dssp CCSSC-------HHHHHHHHTTCSEEEECCCCSSS--------STTTTTHHHHHHHHHHS-CCCSEEECSCCSSCTTSCC
T ss_pred eeccc-------chhhhhhccCcchhhhhhhhccc--------ccchhhhhHHHHHHHHh-cCCcEEEEeeccccCCCcc
Confidence 99994 44445788899999999986433 34666778889999886 5566777787655443210
Q ss_pred eeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcHHHHHHHHHHHHHHHhhcCCcE
Q 010075 172 LILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLMQQSKENLSL 251 (519)
Q Consensus 172 ~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~Y~~sK~~aE~lv~~~~~~lp~ 251 (519)
.+ ..+...|..+|..++..... .++++
T Consensus 125 ----------~~-----------------------------------------~~~~~~~~~~~~~~~~~~~~--~~~~~ 151 (312)
T d1qyda_ 125 ----------HA-----------------------------------------LQPGSITFIDKRKVRRAIEA--ASIPY 151 (312)
T ss_dssp ----------CC-----------------------------------------CSSTTHHHHHHHHHHHHHHH--TTCCB
T ss_pred ----------cc-----------------------------------------cchhhhhhHHHHHHHHhhcc--cccce
Confidence 00 13456788888888887665 68999
Q ss_pred EEEecCccccCCCCCCCcccccccccHHHHHHhhcCCceeeccCCCceeeeeeHHHHHHHHHHHHHHhccCCCCCcEEEe
Q 010075 252 VIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMIVAMVAHAKQPSDANIYHV 331 (519)
Q Consensus 252 ~IvRPs~V~g~~~~p~~gw~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~d~vpVDdva~aii~a~~~~~~~~~~~~iyni 331 (519)
+++||+.++|....+...+.... ...+....++++++..+++|+++|+|++++.++...... ...+|++
T Consensus 152 ~i~r~~~~~g~~~~~~~~~~~~~---------~~~~~~~~~~~~g~~~~~~i~v~Dva~a~~~~l~~~~~~--~~~~~~~ 220 (312)
T d1qyda_ 152 TYVSSNMFAGYFAGSLAQLDGHM---------MPPRDKVLIYGDGNVKGIWVDEDDVGTYTIKSIDDPQTL--NKTMYIR 220 (312)
T ss_dssp CEEECCEEHHHHTTTSSCTTCCS---------SCCSSEECCBTTSCSEEEEECHHHHHHHHHHHTTCGGGS--SSEEECC
T ss_pred EEeccceeecCCccchhhHHHHh---------hhcccccccccccccccceeeHHHHHHHHHHHhcCcccc--CceEEEe
Confidence 99999999997654433332221 112344566789999999999999999999998654322 1346777
Q ss_pred cCCCCCchhHHHHHHH
Q 010075 332 GSSLRNPVTLGLQVAN 347 (519)
Q Consensus 332 ~s~~~~~i~~~~~~~~ 347 (519)
+++...+...++..+.
T Consensus 221 ~~~~~~s~~e~~~~~~ 236 (312)
T d1qyda_ 221 PPMNILSQKEVIQIWE 236 (312)
T ss_dssp CGGGEEEHHHHHHHHH
T ss_pred CCCcCCCHHHHHHHHH
Confidence 7664444443444443
|
| >d2q46a1 c.2.1.2 (A:2-253) Hypothetical protein At5g02240 (T7H20_290) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein At5g02240 (T7H20 290) species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=99.85 E-value=5.2e-21 Score=180.92 Aligned_cols=212 Identities=17% Similarity=0.130 Sum_probs=148.9
Q ss_pred CEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEEec
Q 010075 13 KTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVPG 92 (519)
Q Consensus 13 k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v~g 92 (519)
++|||||||||||++++++|++.|+.| .|+++.|+.... +. ...+++++.+
T Consensus 4 ~tVlVtGatG~iG~~l~~~Ll~~g~~v-~v~~~~R~~~~~---~~-------------------------~~~~~~~~~~ 54 (252)
T d2q46a1 4 PTVLVTGASGRTGQIVYKKLKEGSDKF-VAKGLVRSAQGK---EK-------------------------IGGEADVFIG 54 (252)
T ss_dssp CEEEEESTTSTTHHHHHHHHHHTTTTC-EEEEEESCHHHH---HH-------------------------TTCCTTEEEC
T ss_pred CEEEEECCccHHHHHHHHHHHHCCCcE-EEEEEcCCHHHH---Hh-------------------------ccCCcEEEEe
Confidence 689999999999999999999999775 688888864221 00 1357889999
Q ss_pred cCCCCCCCCChhhhHHHHhcCccEEEEcCccCCcc----------------ccHHHHHHHhHHHHHHHHHHHHhccCCce
Q 010075 93 DISSEDLGLKDSNLKEELWNELDIMVNSAAITKFD----------------ERYDVAFGINTLGVIHLVNFAKKCVKLKV 156 (519)
Q Consensus 93 Dl~~~~lgls~~~~~~~l~~~vdiViH~Aa~v~f~----------------~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~ 156 (519)
|+++ .+....+++++|+|||+|+..... ........+|+.|+.+++..+... ..+.
T Consensus 55 d~~~-------~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 126 (252)
T d2q46a1 55 DITD-------ADSINPAFQGIDALVILTSAVPKMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQKNQIDAAKVA-GVKH 126 (252)
T ss_dssp CTTS-------HHHHHHHHTTCSEEEECCCCCCEECTTCCTTSCCCCCEECCTTCSHHHHTTHHHHHHHHHHHHH-TCSE
T ss_pred eecc-------ccccccccccceeeEEEEeeccccccccchhhhhhcccccccchhhhccccccceeeccccccc-cccc
Confidence 9995 344457888999999999875321 223455788999999999999886 7788
Q ss_pred EEEEecceeecCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcHHHHHHH
Q 010075 157 FVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKT 236 (519)
Q Consensus 157 ~V~vSTa~v~~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~Y~~sK~ 236 (519)
+.+.|+......... . .......|...+.
T Consensus 127 ~~~~s~~~~~~~~~~------~---------------------------------------------~~~~~~~~~~~~~ 155 (252)
T d2q46a1 127 IVVVGSMGGTNPDHP------L---------------------------------------------NKLGNGNILVWKR 155 (252)
T ss_dssp EEEEEETTTTCTTCG------G---------------------------------------------GGGGGCCHHHHHH
T ss_pred cccccccccCCCCcc------c---------------------------------------------ccccccchhhhhh
Confidence 888887655432110 0 0012345677777
Q ss_pred HHHHHHHHhhcCCcEEEEecCccccCCCCCCCcccccccccHHHHHHhhcCCceeeccCCCceeeeeeHHHHHHHHHHHH
Q 010075 237 MGEMLMQQSKENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMIVAM 316 (519)
Q Consensus 237 ~aE~lv~~~~~~lp~~IvRPs~V~g~~~~p~~gw~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~d~vpVDdva~aii~a~ 316 (519)
+.+....+ .+++++++||+.++|+.....+.+... + .. ......++||+||||++++.++
T Consensus 156 ~~~~~~~~--~~~~~~ilRp~~v~g~~~~~~~~~~~~-------------~--~~---~~~~~~~~i~~~Dva~a~~~~l 215 (252)
T d2q46a1 156 KAEQYLAD--SGTPYTIIRAGGLLDKEGGVRELLVGK-------------D--DE---LLQTDTKTVPRADVAEVCIQAL 215 (252)
T ss_dssp HHHHHHHH--SSSCEEEEEECEEECSCTTSSCEEEES-------------T--TG---GGGSSCCEEEHHHHHHHHHHHT
T ss_pred hhhhhhhc--ccccceeecceEEECCCcchhhhhhcc-------------C--cc---cccCCCCeEEHHHHHHHHHHHh
Confidence 77766555 689999999999999875433222111 0 00 1123356899999999999998
Q ss_pred HHhccCCCCCcEEEecCCC
Q 010075 317 VAHAKQPSDANIYHVGSSL 335 (519)
Q Consensus 317 ~~~~~~~~~~~iyni~s~~ 335 (519)
..+.. .+++||++++.
T Consensus 216 ~~~~~---~g~~~~i~~~~ 231 (252)
T d2q46a1 216 LFEEA---KNKAFDLGSKP 231 (252)
T ss_dssp TCGGG---TTEEEEEEECC
T ss_pred CCccc---cCcEEEEeeCC
Confidence 75432 26899998764
|
| >d1qyca_ c.2.1.2 (A:) Phenylcoumaran benzylic ether reductase {Loblolly pine (Pinus taeda) [TaxId: 3352]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Phenylcoumaran benzylic ether reductase species: Loblolly pine (Pinus taeda) [TaxId: 3352]
Probab=99.82 E-value=2.9e-20 Score=181.71 Aligned_cols=229 Identities=12% Similarity=0.142 Sum_probs=155.5
Q ss_pred CCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEEe
Q 010075 12 NKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVP 91 (519)
Q Consensus 12 ~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v~ 91 (519)
.|+|||||||||+|+++++.|+++| ++|++++|+.......++.. .+.. ....++.++.
T Consensus 3 kkKILVtGatG~iG~~l~~~L~~~G---~~V~~l~R~~~~~~~~~~~~----------~~~~--------~~~~~~~~~~ 61 (307)
T d1qyca_ 3 RSRILLIGATGYIGRHVAKASLDLG---HPTFLLVRESTASSNSEKAQ----------LLES--------FKASGANIVH 61 (307)
T ss_dssp CCCEEEESTTSTTHHHHHHHHHHTT---CCEEEECCCCCTTTTHHHHH----------HHHH--------HHTTTCEEEC
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCC---CeEEEEECCCccccchhHHH----------HHHh--------hccCCcEEEE
Confidence 5889999999999999999999998 57899999876544333221 0111 1135688999
Q ss_pred ccCCCCCCCCChhhhHHHHhcCccEEEEcCccCCccccHHHHHHHhHHHHHHHHHHHHhccCCceEEEEecceeecCcCC
Q 010075 92 GDISSEDLGLKDSNLKEELWNELDIMVNSAAITKFDERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAYVAGERTG 171 (519)
Q Consensus 92 gDl~~~~lgls~~~~~~~l~~~vdiViH~Aa~v~f~~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V~vSTa~v~~~~~~ 171 (519)
+|+.+ .+.......+++.|+|+++.. ++.++.+++++++.. +.+.+++.|+........
T Consensus 62 ~d~~~-------~~~~~~~~~~~~~vi~~~~~~------------~~~~~~~~~~a~~~~-~~~~~~~~s~~~~~~~~~- 120 (307)
T d1qyca_ 62 GSIDD-------HASLVEAVKNVDVVISTVGSL------------QIESQVNIIKAIKEV-GTVKRFFPSEFGNDVDNV- 120 (307)
T ss_dssp CCTTC-------HHHHHHHHHTCSEEEECCCGG------------GSGGGHHHHHHHHHH-CCCSEEECSCCSSCTTSC-
T ss_pred eeccc-------chhhhhhhhhceeeeeccccc------------ccchhhHHHHHHHHh-ccccceeeeccccccccc-
Confidence 99995 333346778899999999764 344556677888876 777888888764433221
Q ss_pred eeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcHHHHHHHHHHHHHHHhhcCCcE
Q 010075 172 LILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLMQQSKENLSL 251 (519)
Q Consensus 172 ~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~Y~~sK~~aE~lv~~~~~~lp~ 251 (519)
+.. .....|...+...|..+.+ .++++
T Consensus 121 ----------~~~-----------------------------------------~~~~~~~~~~~~~~~~~~~--~~~~~ 147 (307)
T d1qyca_ 121 ----------HAV-----------------------------------------EPAKSVFEVKAKVRRAIEA--EGIPY 147 (307)
T ss_dssp ----------CCC-----------------------------------------TTHHHHHHHHHHHHHHHHH--HTCCB
T ss_pred ----------ccc-----------------------------------------ccccccccccccccchhhc--cCCCc
Confidence 000 1223466667777777666 58899
Q ss_pred EEEecCccccCCCCCCCcccccccccHHHHHHhhcCCceeeccCCCceeeeeeHHHHHHHHHHHHHHhccCCCCCcEEEe
Q 010075 252 VIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMIVAMVAHAKQPSDANIYHV 331 (519)
Q Consensus 252 ~IvRPs~V~g~~~~p~~gw~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~d~vpVDdva~aii~a~~~~~~~~~~~~iyni 331 (519)
+|+||+.++|+...++..+. ....++....++++++..+++|+++|+|++++.++....... ..+||+
T Consensus 148 ~i~r~~~v~g~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~l~~~~~~~--~~~~~~ 215 (307)
T d1qyca_ 148 TYVSSNCFAGYFLRSLAQAG----------LTAPPRDKVVILGDGNARVVFVKEEDIGTFTIKAVDDPRTLN--KTLYLR 215 (307)
T ss_dssp EEEECCEEHHHHTTTTTCTT----------CSSCCSSEEEEETTSCCEEEEECHHHHHHHHHTTSSCGGGTT--EEEECC
T ss_pred eecccceecCCCccchhhhh----------hhhhhcccceeeecccccccCCcHHHHHHHHHHHhcChhhcC--ceeEEe
Confidence 99999999997654332221 123344556677889999999999999999999886443321 346777
Q ss_pred cCCCCCchhHHHHHHH
Q 010075 332 GSSLRNPVTLGLQVAN 347 (519)
Q Consensus 332 ~s~~~~~i~~~~~~~~ 347 (519)
+++...++..+...+.
T Consensus 216 ~~~~~~s~~ei~~~~~ 231 (307)
T d1qyca_ 216 LPANTLSLNELVALWE 231 (307)
T ss_dssp CGGGEEEHHHHHHHHH
T ss_pred CCCCccCHHHHHHHHH
Confidence 7764444333444443
|
| >d1xgka_ c.2.1.2 (A:) Negative transcriptional regulator NmrA {Aspergillus nidulans [TaxId: 162425]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Negative transcriptional regulator NmrA species: Aspergillus nidulans [TaxId: 162425]
Probab=99.72 E-value=1.6e-16 Score=159.60 Aligned_cols=227 Identities=12% Similarity=0.012 Sum_probs=151.1
Q ss_pred CCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEE
Q 010075 11 ENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFV 90 (519)
Q Consensus 11 ~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v 90 (519)
+.|+|+|||||||+|++|+++|++.| ++|++++|+..+.... .+. ...+++++
T Consensus 2 ~kktIlVtGatG~iG~~lv~~Ll~~G---~~V~~l~R~~~~~~~~-~~~-----------------------~~~~v~~~ 54 (350)
T d1xgka_ 2 QKKTIAVVGATGRQGASLIRVAAAVG---HHVRAQVHSLKGLIAE-ELQ-----------------------AIPNVTLF 54 (350)
T ss_dssp CCCCEEEESTTSHHHHHHHHHHHHTT---CCEEEEESCSCSHHHH-HHH-----------------------TSTTEEEE
T ss_pred CCCEEEEECCChHHHHHHHHHHHhCC---CeEEEEECCcchhhhh-hhc-----------------------ccCCCEEE
Confidence 46899999999999999999999998 5779999986553221 111 12578999
Q ss_pred eccCCCCCCCCChhhhHHHHhcCccEEEEcCccCCccccHHHHHHHhHHHHHHHHHHHHhccCCceEEEEecceeecCcC
Q 010075 91 PGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKFDERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAYVAGERT 170 (519)
Q Consensus 91 ~gDl~~~~lgls~~~~~~~l~~~vdiViH~Aa~v~f~~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V~vSTa~v~~~~~ 170 (519)
.||+.+ +.+..+.++..+|.+++...... ..|+.++.+++++|++. +++++++.||........
T Consensus 55 ~gD~~d------~~~~~~~a~~~~~~~~~~~~~~~---------~~~~~~~~~~~~aa~~a-gv~~~v~~Ss~~~~~~~~ 118 (350)
T d1xgka_ 55 QGPLLN------NVPLMDTLFEGAHLAFINTTSQA---------GDEIAIGKDLADAAKRA-GTIQHYIYSSMPDHSLYG 118 (350)
T ss_dssp ESCCTT------CHHHHHHHHTTCSEEEECCCSTT---------SCHHHHHHHHHHHHHHH-SCCSEEEEEECCCGGGTS
T ss_pred EeeCCC------cHHHHHHHhcCCceEEeeccccc---------chhhhhhhHHHHHHHHh-CCCceEEEeeccccccCC
Confidence 999996 34555577888999988765422 23667788999999987 777888888865433211
Q ss_pred CeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcHHHHHHHHHHHHHHHhhcCCc
Q 010075 171 GLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLMQQSKENLS 250 (519)
Q Consensus 171 ~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~Y~~sK~~aE~lv~~~~~~lp 250 (519)
. .+...|..+|...|..+.+ ..++
T Consensus 119 ~------------------------------------------------------~~~~~~~~~k~~~~~~~~~--~~~~ 142 (350)
T d1xgka_ 119 P------------------------------------------------------WPAVPMWAPKFTVENYVRQ--LGLP 142 (350)
T ss_dssp S------------------------------------------------------CCCCTTTHHHHHHHHHHHT--SSSC
T ss_pred c------------------------------------------------------ccchhhhhhHHHHHHHHHh--hccC
Confidence 0 2234566788888887776 5789
Q ss_pred EEEEecCccccCCCCCCCcccccccccHHHHHHhhcCCc-eeeccCCCceeeeeeH-HHHHHHHHHHHHHhccCCCCCcE
Q 010075 251 LVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNL-RCLVGETKVIMDVIPV-DMVVNAMIVAMVAHAKQPSDANI 328 (519)
Q Consensus 251 ~~IvRPs~V~g~~~~p~~gw~~~~~~~~~~i~~~~~g~~-~~~~~~~~~~~d~vpV-Ddva~aii~a~~~~~~~~~~~~i 328 (519)
++++||+..++....+..+..... ....|.. ...+.+++....++++ +|+++++..++...... ..+++
T Consensus 143 ~~~vr~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~i~~~~Dva~~v~~~l~~~~~~-~~G~~ 213 (350)
T d1xgka_ 143 STFVYAGIYNNNFTSLPYPLFQME--------LMPDGTFEWHAPFDPDIPLPWLDAEHDVGPALLQIFKDGPQK-WNGHR 213 (350)
T ss_dssp EEEEEECEEGGGCBSSSCSSCBEE--------ECTTSCEEEEESSCTTSCEEEECHHHHHHHHHHHHHHHCHHH-HTTCE
T ss_pred ceeeeeceeecccccccccccccc--------ccccccceeeecccCCCcceEEEeHHHHHHHHHHHHhCChhh-cCCeE
Confidence 999999998876442221111100 0112222 2344567777888875 89999998888643211 12678
Q ss_pred EEecCCCCCchhHHHHHH
Q 010075 329 YHVGSSLRNPVTLGLQVA 346 (519)
Q Consensus 329 yni~s~~~~~i~~~~~~~ 346 (519)
|++++. ..+...+...+
T Consensus 214 ~~~~g~-~~T~~eia~~l 230 (350)
T d1xgka_ 214 IALTFE-TLSPVQVCAAF 230 (350)
T ss_dssp EEECSE-EECHHHHHHHH
T ss_pred EEEeCC-cCCHHHHHHHH
Confidence 999764 33433343333
|
| >d1nffa_ c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Putative oxidoreductase Rv2002 species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=99.68 E-value=5e-16 Score=148.34 Aligned_cols=216 Identities=14% Similarity=0.111 Sum_probs=148.3
Q ss_pred cCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 010075 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (519)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (519)
++||+++||||++.||+++++.|++.| .+|++..|+.. ..+.+. ++. .+++.+
T Consensus 4 L~gK~alITGas~GIG~aia~~la~~G---~~V~~~~r~~~---~~~~~~-------------~~~--------~~~~~~ 56 (244)
T d1nffa_ 4 LTGKVALVSGGARGMGASHVRAMVAEG---AKVVFGDILDE---EGKAMA-------------AEL--------ADAARY 56 (244)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHTT---CEEEEEESCHH---HHHHHH-------------HHT--------GGGEEE
T ss_pred cCCCEEEEeCCCCHHHHHHHHHHHHCC---CEEEEEECCHH---HHHHHH-------------HHh--------hCcceE
Confidence 689999999999999999999999999 67888888642 112222 121 256789
Q ss_pred EeccCCCCCCCCChhhhHHH---HhcCccEEEEcCccCCc-------cccHHHHHHHhHHHHHHHHHHHHh-c--cCCce
Q 010075 90 VPGDISSEDLGLKDSNLKEE---LWNELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKK-C--VKLKV 156 (519)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~---l~~~vdiViH~Aa~v~f-------~~~~~~~~~~Nv~gt~~ll~~a~~-~--~~l~~ 156 (519)
+.+|+++++- -.+..++ ....+|++||+||.... .+.++..+++|+.|+..+.+.+.. + ++-.+
T Consensus 57 ~~~Dv~~~~~---v~~~~~~~~~~~g~idilinnAG~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~ 133 (244)
T d1nffa_ 57 VHLDVTQPAQ---WKAAVDTAVTAFGGLHVLVNNAGILNIGTIEDYALTEWQRILDVNLTGVFLGIRAVVKPMKEAGRGS 133 (244)
T ss_dssp EECCTTCHHH---HHHHHHHHHHHHSCCCEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEE
T ss_pred EEeecCCHHH---HHHHHHHHHHHhCCCeEEEECCcccCCCchhhCCHHHHhHHhhcccchhhHHHHHHHhHHHhcCcce
Confidence 9999996321 0111111 23469999999998643 267889999999999998876532 2 24468
Q ss_pred EEEEecceeecCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcHHHHHHH
Q 010075 157 FVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKT 236 (519)
Q Consensus 157 ~V~vSTa~v~~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~Y~~sK~ 236 (519)
+|++||....... .....|+.||+
T Consensus 134 Ii~isS~~~~~~~--------------------------------------------------------~~~~~Y~asKa 157 (244)
T d1nffa_ 134 IINISSIEGLAGT--------------------------------------------------------VACHGYTATKF 157 (244)
T ss_dssp EEEECCGGGTSCC--------------------------------------------------------TTBHHHHHHHH
T ss_pred EEecccccccccc--------------------------------------------------------ccccchhhHHH
Confidence 9999997653211 12357999999
Q ss_pred HHHHHHHHh-----hcCCcEEEEecCccccCCCCCCCcccccccccHHHHHHhhcCCceeeccCCCceeeeeeHHHHHHH
Q 010075 237 MGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNA 311 (519)
Q Consensus 237 ~aE~lv~~~-----~~~lp~~IvRPs~V~g~~~~p~~gw~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~d~vpVDdva~a 311 (519)
..+.+.+.. ..++.+..|-||.|-.+..+..+.... . ....-+...+|+|++
T Consensus 158 al~~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~------------------~-----~pl~R~~~p~diA~~ 214 (244)
T d1nffa_ 158 AVRGLTKSTALELGPSGIRVNSIHPGLVKTPMTDWVPEDIF------------------Q-----TALGRAAEPVEVSNL 214 (244)
T ss_dssp HHHHHHHHHHHHHGGGTEEEEEEEECCBCSGGGTTSCTTCS------------------C-----CSSSSCBCHHHHHHH
T ss_pred HHHHHHHHHHHHhcccCEEEEEEeeCCccChhHhhhhHHHH------------------h-----ccccCCCCHHHHHHH
Confidence 999888754 557999999999887654432221110 0 011225678999999
Q ss_pred HHHHHHHhccCCCCCcEEEecCCC
Q 010075 312 MIVAMVAHAKQPSDANIYHVGSSL 335 (519)
Q Consensus 312 ii~a~~~~~~~~~~~~iyni~s~~ 335 (519)
++.++.... .--.++++.+.+|.
T Consensus 215 v~fL~s~~s-~~itG~~i~vDGG~ 237 (244)
T d1nffa_ 215 VVYLASDES-SYSTGAEFVVDGGT 237 (244)
T ss_dssp HHHHHSGGG-TTCCSCEEEESTTG
T ss_pred HHHHhChhh-CCCcCCEEEECCCe
Confidence 998886332 22247888887773
|
| >d1sbya1 c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase {Fly (Drosophila lebanonensis) [TaxId: 7225]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Drosophila alcohol dehydrogenase species: Fly (Drosophila lebanonensis) [TaxId: 7225]
Probab=99.67 E-value=6.7e-16 Score=148.42 Aligned_cols=230 Identities=13% Similarity=0.161 Sum_probs=152.7
Q ss_pred cCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 010075 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (519)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (519)
++||+||||||++.||+.+++.|++.| .+|+++.|........+.+. ...+ ..++.+
T Consensus 3 l~gK~vlITGgs~GIG~~~A~~la~~G---~~vii~~r~~~~~~~~~~~~-------------~~~~-------~~~~~~ 59 (254)
T d1sbya1 3 LTNKNVIFVAALGGIGLDTSRELVKRN---LKNFVILDRVENPTALAELK-------------AINP-------KVNITF 59 (254)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTC---CSEEEEEESSCCHHHHHHHH-------------HHCT-------TSEEEE
T ss_pred CCCCEEEEecCCCHHHHHHHHHHHHCC---CEEEEEECCcccHHHHHHHH-------------hhCC-------CCCEEE
Confidence 579999999999999999999999999 67788888876543333222 1211 367899
Q ss_pred EeccCCCCCCCCChhhhHH---HHhcCccEEEEcCccCCccccHHHHHHHhHHHHHHHHHHHHh-c-----cCCceEEEE
Q 010075 90 VPGDISSEDLGLKDSNLKE---ELWNELDIMVNSAAITKFDERYDVAFGINTLGVIHLVNFAKK-C-----VKLKVFVHV 160 (519)
Q Consensus 90 v~gDl~~~~lgls~~~~~~---~l~~~vdiViH~Aa~v~f~~~~~~~~~~Nv~gt~~ll~~a~~-~-----~~l~~~V~v 160 (519)
+..|++.+.-. -.+..+ ....++|++||+||... .+.++..+++|+.|+.++.+++.+ + +...++|++
T Consensus 60 ~~~d~~~~~~~--~~~~~~~~~~~~g~iDilvnnAG~~~-~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~~~~g~Ii~i 136 (254)
T d1sbya1 60 HTYDVTVPVAE--SKKLLKKIFDQLKTVDILINGAGILD-DHQIERTIAINFTGLVNTTTAILDFWDKRKGGPGGIIANI 136 (254)
T ss_dssp EECCTTSCHHH--HHHHHHHHHHHHSCCCEEEECCCCCC-TTCHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEE
T ss_pred EEeecCCCHHH--HHHHHHHHHHHcCCCCEEEeCCCCCC-HHHHHHHHHHHhHHHHHHHHHHHHHhhhcccCCCceEEEE
Confidence 99999853100 011111 22357999999999754 578999999999999998887644 2 124679999
Q ss_pred ecceeecCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcHHHHHHHHHHH
Q 010075 161 STAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEM 240 (519)
Q Consensus 161 STa~v~~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~Y~~sK~~aE~ 240 (519)
||....... .....|+.||+....
T Consensus 137 sS~~~~~~~--------------------------------------------------------~~~~~Y~asKaal~~ 160 (254)
T d1sbya1 137 CSVTGFNAI--------------------------------------------------------HQVPVYSASKAAVVS 160 (254)
T ss_dssp CCGGGTSCC--------------------------------------------------------TTSHHHHHHHHHHHH
T ss_pred echhhccCC--------------------------------------------------------CCCHHHHHHHHHHHH
Confidence 987653211 123479999998888
Q ss_pred HHHHh-----hcCCcEEEEecCccccCCCCCCCcccccccccHHHHHHhhcCCceeeccCCCceeeeeeHHHHHHHHHHH
Q 010075 241 LMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMIVA 315 (519)
Q Consensus 241 lv~~~-----~~~lp~~IvRPs~V~g~~~~p~~gw~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~d~vpVDdva~aii~a 315 (519)
+.+.. ..++.+..|-||.|..+..+....|.+. ...+..... .....+.+++|++++.+
T Consensus 161 ~t~~la~el~~~gIrVn~I~PG~v~T~~~~~~~~~~~~----~~~~~~~~~------------~~~~~~~e~va~~~~~~ 224 (254)
T d1sbya1 161 FTNSLAKLAPITGVTAYSINPGITRTPLVHTFNSWLDV----EPRVAELLL------------SHPTQTSEQCGQNFVKA 224 (254)
T ss_dssp HHHHHHHHHHHHSEEEEEEEECSEESHHHHSCCCGGGS----CTTHHHHHT------------TSCCEEHHHHHHHHHHH
T ss_pred HHHHHHhhccccCeEEEEEEeCCCcCccccccccchhH----HHHHHhccc------------cCCCCCHHHHHHHHHHh
Confidence 87754 4579999999999976532111111111 001111110 11245899999999888
Q ss_pred HHHhccCCCCCcEEEecCCCCCchhH
Q 010075 316 MVAHAKQPSDANIYHVGSSLRNPVTL 341 (519)
Q Consensus 316 ~~~~~~~~~~~~iyni~s~~~~~i~~ 341 (519)
+.... .+.++.+.+|.-.++.|
T Consensus 225 ~~~~~----tG~vi~vdgG~l~~~~~ 246 (254)
T d1sbya1 225 IEANK----NGAIWKLDLGTLEAIEW 246 (254)
T ss_dssp HHHCC----TTCEEEEETTEEEECCC
T ss_pred hhCCC----CCCEEEECCCEeCccCC
Confidence 76432 37899998875444433
|
| >d1uzma1 c.2.1.2 (A:9-245) beta-keto acyl carrier protein reductase {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=99.66 E-value=6.1e-16 Score=147.14 Aligned_cols=212 Identities=12% Similarity=0.145 Sum_probs=144.4
Q ss_pred cCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 010075 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (519)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (519)
|+||+++||||++.||++++++|++.| .+|++..|+... .+++..
T Consensus 5 l~gK~~lITGas~GIG~aia~~la~~G---a~V~~~~r~~~~--------------------------------~~~~~~ 49 (237)
T d1uzma1 5 FVSRSVLVTGGNRGIGLAIAQRLAADG---HKVAVTHRGSGA--------------------------------PKGLFG 49 (237)
T ss_dssp CCCCEEEETTTTSHHHHHHHHHHHHTT---CEEEEEESSSCC--------------------------------CTTSEE
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCC---CEEEEEECCcch--------------------------------hcCceE
Confidence 789999999999999999999999999 688999987543 256778
Q ss_pred EeccCCCCCCCCChhhhHHH---HhcCccEEEEcCccCCc-------cccHHHHHHHhHHHHHHHHHHHHh-c--cCCce
Q 010075 90 VPGDISSEDLGLKDSNLKEE---LWNELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKK-C--VKLKV 156 (519)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~---l~~~vdiViH~Aa~v~f-------~~~~~~~~~~Nv~gt~~ll~~a~~-~--~~l~~ 156 (519)
+.+|+++++. -....+. ...++|++||+||.... .+.++..+++|+.|+..+.+.+.. + ++-.+
T Consensus 50 ~~~Dv~~~~~---v~~~~~~~~~~~g~iDiLVnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~g~ 126 (237)
T d1uzma1 50 VEVDVTDSDA---VDRAFTAVEEHQGPVEVLVSNAGLSADAFLMRMTEEKFEKVINANLTGAFRVAQRASRSMQRNKFGR 126 (237)
T ss_dssp EECCTTCHHH---HHHHHHHHHHHHSSCSEEEEECSCCC-----CCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEE
T ss_pred EEEecCCHHH---HHHHHHHHHHhcCCceEEEeeecccccccHhhCCHHHHHHHHHhhhhhhhhhhhhhhhcccccCCCc
Confidence 9999996421 0111111 22469999999997532 367889999999999888775532 2 35568
Q ss_pred EEEEecceeecCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcHHHHHHH
Q 010075 157 FVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKT 236 (519)
Q Consensus 157 ~V~vSTa~v~~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~Y~~sK~ 236 (519)
+|++||....... .....|+.||+
T Consensus 127 Iv~isS~~~~~~~--------------------------------------------------------~~~~~Y~asKa 150 (237)
T d1uzma1 127 MIFIGSVSGLWGI--------------------------------------------------------GNQANYAASKA 150 (237)
T ss_dssp EEEECCCCC-------------------------------------------------------------CCHHHHHHHH
T ss_pred eEEEcchhhccCC--------------------------------------------------------cccHHHHHHHH
Confidence 9999997654211 12357999999
Q ss_pred HHHHHHHHh-----hcCCcEEEEecCccccCCCCCCCcccccccccHHHHHHhhcCCceeeccCCCceeeeeeHHHHHHH
Q 010075 237 MGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNA 311 (519)
Q Consensus 237 ~aE~lv~~~-----~~~lp~~IvRPs~V~g~~~~p~~gw~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~d~vpVDdva~a 311 (519)
..+.+.+.. ..++.+..+.||.|..+..+..+ ......... ..+ ..-+.-.+|+|++
T Consensus 151 al~~lt~~lA~e~~~~gIrVN~I~PG~v~T~~~~~~~---------~~~~~~~~~----~~p-----l~R~~~pedvA~~ 212 (237)
T d1uzma1 151 GVIGMARSIARELSKANVTANVVAPGYIDTDMTRALD---------ERIQQGALQ----FIP-----AKRVGTPAEVAGV 212 (237)
T ss_dssp HHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHSC---------HHHHHHHGG----GCT-----TCSCBCHHHHHHH
T ss_pred HHHHHHHHHHhhhhcCCceeeeeeeCcCCChhhhccC---------HHHHHHHHh----cCC-----CCCCcCHHHHHHH
Confidence 988887754 56799999999998654321111 111111111 111 1124567899999
Q ss_pred HHHHHHHhccCCCCCcEEEecCC
Q 010075 312 MIVAMVAHAKQPSDANIYHVGSS 334 (519)
Q Consensus 312 ii~a~~~~~~~~~~~~iyni~s~ 334 (519)
++.++.... .--.+++..+.+|
T Consensus 213 v~fL~S~~s-~~itG~~i~vdGG 234 (237)
T d1uzma1 213 VSFLASEDA-SYISGAVIPVDGG 234 (237)
T ss_dssp HHHHHSGGG-TTCCSCEEEESTT
T ss_pred HHHHhCchh-cCCcCCeEEECCC
Confidence 998886432 2224788888776
|
| >d2d1ya1 c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein TTHA0369 species: Thermus thermophilus [TaxId: 274]
Probab=99.65 E-value=1.1e-15 Score=146.33 Aligned_cols=224 Identities=15% Similarity=0.078 Sum_probs=145.2
Q ss_pred hcCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceE
Q 010075 9 FLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKIT 88 (519)
Q Consensus 9 ~~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~ 88 (519)
.++||++|||||++.||+++++.|++.| .+|++..|+.......+ + .+..
T Consensus 2 ~l~GK~alITGas~GIG~aia~~la~~G---~~V~~~~~~~~~~~~~~-----------------~----------~~~~ 51 (248)
T d2d1ya1 2 LFAGKGVLVTGGARGIGRAIAQAFAREG---ALVALCDLRPEGKEVAE-----------------A----------IGGA 51 (248)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHTT---CEEEEEESSTTHHHHHH-----------------H----------HTCE
T ss_pred ccCCCEEEEeCCCCHHHHHHHHHHHHCC---CEEEEEECCHHHHHHHH-----------------H----------cCCe
Confidence 5789999999999999999999999999 68889988764321111 1 1245
Q ss_pred EEeccCCCCCCCCChhhhHH---HHhcCccEEEEcCccCCc-------cccHHHHHHHhHHHHHHHHHHHHh-c--cCCc
Q 010075 89 FVPGDISSEDLGLKDSNLKE---ELWNELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKK-C--VKLK 155 (519)
Q Consensus 89 ~v~gDl~~~~lgls~~~~~~---~l~~~vdiViH~Aa~v~f-------~~~~~~~~~~Nv~gt~~ll~~a~~-~--~~l~ 155 (519)
.+.+|+++++- -.+..+ +...++|++||+||.... .+.++..+++|+.|+..+.+.+.+ + ++-.
T Consensus 52 ~~~~Dv~~~~~---v~~~~~~~~~~~G~iDiLVnnAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G 128 (248)
T d2d1ya1 52 FFQVDLEDERE---RVRFVEEAAYALGRVDVLVNNAAIAAPGSALTVRLPEWRRVLEVNLTAPMHLSALAAREMRKVGGG 128 (248)
T ss_dssp EEECCTTCHHH---HHHHHHHHHHHHSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCE
T ss_pred EEEEeCCCHHH---HHHHHHHHHHhcCCCCeEEEeCcCCCCCChhhCCHHHHHHHHHhhhhhHhhhhhhhcccccccccc
Confidence 78999996321 011111 123479999999997643 256888999999999999888754 2 2456
Q ss_pred eEEEEecceeecCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcHHHHHH
Q 010075 156 VFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTK 235 (519)
Q Consensus 156 ~~V~vSTa~v~~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~Y~~sK 235 (519)
++|++||....... .....|+.||
T Consensus 129 ~Ii~isS~~~~~~~--------------------------------------------------------~~~~~Y~asK 152 (248)
T d2d1ya1 129 AIVNVASVQGLFAE--------------------------------------------------------QENAAYNASK 152 (248)
T ss_dssp EEEEECCGGGTSBC--------------------------------------------------------TTBHHHHHHH
T ss_pred cccccccccccccc--------------------------------------------------------cccchhHHHH
Confidence 89999998654211 2245799999
Q ss_pred HHHHHHHHHh-----hcCCcEEEEecCccccCCCCCCCcccccccccHHHHHHhhcCCceeeccCCCceeeeeeHHHHHH
Q 010075 236 TMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVN 310 (519)
Q Consensus 236 ~~aE~lv~~~-----~~~lp~~IvRPs~V~g~~~~p~~gw~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~d~vpVDdva~ 310 (519)
+..+.+.+.. ..++.+..+-||.|-.+..... +..+ ..+......... .....-+...+|+|+
T Consensus 153 aal~~ltk~lA~el~~~gIrVN~I~PG~v~T~~~~~~--~~~~-~~~~~~~~~~~~---------~~pl~R~~~pedia~ 220 (248)
T d2d1ya1 153 GGLVNLTRSLALDLAPLRIRVNAVAPGAIATEAVLEA--IALS-PDPERTRRDWED---------LHALRRLGKPEEVAE 220 (248)
T ss_dssp HHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHH--HC---------CHHHHT---------TSTTSSCBCHHHHHH
T ss_pred HHHHHHHHHHHHHhhhhCcEEEEEeeCCCCCchHHHH--hhcC-CCHHHHHHHHHh---------cCCCCCCcCHHHHHH
Confidence 9998887754 4589999999998865321000 0000 000001111111 111122456799999
Q ss_pred HHHHHHHHhccCCCCCcEEEecCC
Q 010075 311 AMIVAMVAHAKQPSDANIYHVGSS 334 (519)
Q Consensus 311 aii~a~~~~~~~~~~~~iyni~s~ 334 (519)
++..++.... .--.++++++.+|
T Consensus 221 ~v~fL~S~~s-~~itG~~i~vDGG 243 (248)
T d2d1ya1 221 AVLFLASEKA-SFITGAILPVDGG 243 (248)
T ss_dssp HHHHHHSGGG-TTCCSCEEEESTT
T ss_pred HHHHHhCchh-cCCCCcEEEcCcC
Confidence 9998886432 2224788999887
|
| >d1pr9a_ c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Carbonyl reductase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.65 E-value=2.4e-15 Score=143.59 Aligned_cols=218 Identities=18% Similarity=0.203 Sum_probs=148.6
Q ss_pred hcCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceE
Q 010075 9 FLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKIT 88 (519)
Q Consensus 9 ~~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~ 88 (519)
+++||++|||||++.||++++++|++.| .+|++..|++.. .+.+. ++ ...+.
T Consensus 4 ~L~GK~~lITGas~GIG~aia~~la~~G---~~V~~~~r~~~~---l~~~~-------------~~---------~~~~~ 55 (244)
T d1pr9a_ 4 FLAGRRVLVTGAGKGIGRGTVQALHATG---ARVVAVSRTQAD---LDSLV-------------RE---------CPGIE 55 (244)
T ss_dssp CCTTCEEEEESTTSHHHHHHHHHHHHTT---CEEEEEESCHHH---HHHHH-------------HH---------STTCE
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHcC---CEEEEEECCHHH---HHHHH-------------Hh---------cCCCe
Confidence 3899999999999999999999999999 678888886321 12111 11 14578
Q ss_pred EEeccCCCCCCCCChhhhHHHHh---cCccEEEEcCccCCc-------cccHHHHHHHhHHHHHHHHHHHHh-c---cCC
Q 010075 89 FVPGDISSEDLGLKDSNLKEELW---NELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKK-C---VKL 154 (519)
Q Consensus 89 ~v~gDl~~~~lgls~~~~~~~l~---~~vdiViH~Aa~v~f-------~~~~~~~~~~Nv~gt~~ll~~a~~-~---~~l 154 (519)
.+.+|++++ +..+.+. .++|++||+|+.... .+.++..+++|+.|+..+.+.+.+ + ++-
T Consensus 56 ~~~~Dv~d~-------~~v~~~~~~~g~iDilVnnAg~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~~~ 128 (244)
T d1pr9a_ 56 PVCVDLGDW-------EATERALGSVGPVDLLVNNAAVALLQPFLEVTKEAFDRSFEVNLRAVIQVSQIVARGLIARGVP 128 (244)
T ss_dssp EEECCTTCH-------HHHHHHHTTCCCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCC
T ss_pred EEEEeCCCH-------HHHHHHHHHhCCceEEEeccccccccchhhhhHHHHHHHHHHhhhhhhHHHHHhhhHHHHhCCc
Confidence 899999953 3344544 369999999998643 267888999999999988887643 2 245
Q ss_pred ceEEEEecceeecCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcHHHHH
Q 010075 155 KVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFT 234 (519)
Q Consensus 155 ~~~V~vSTa~v~~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~Y~~s 234 (519)
.++|++||....... +....|+.|
T Consensus 129 g~Ii~isS~~~~~~~--------------------------------------------------------~~~~~Y~as 152 (244)
T d1pr9a_ 129 GAIVNVSSQCSQRAV--------------------------------------------------------TNHSVYCST 152 (244)
T ss_dssp EEEEEECCGGGTSCC--------------------------------------------------------TTBHHHHHH
T ss_pred ceEeecccccccccc--------------------------------------------------------cchhhhhhh
Confidence 789999998653321 223579999
Q ss_pred HHHHHHHHHHh-----hcCCcEEEEecCccccCCCCCCCcccccccccHHHHHHhhcCCceeeccCCCceeeeeeHHHHH
Q 010075 235 KTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVV 309 (519)
Q Consensus 235 K~~aE~lv~~~-----~~~lp~~IvRPs~V~g~~~~p~~gw~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~d~vpVDdva 309 (519)
|+..+.+.+.. ..++.+..|.||.|-.+..+... .. ........... + ..-+...+|+|
T Consensus 153 Kaal~~lt~~lA~el~~~gIrvN~I~PG~v~T~~~~~~~---~~----~~~~~~~~~~~----p-----l~R~~~peevA 216 (244)
T d1pr9a_ 153 KGALDMLTKVMALELGPHKIRVNAVNPTVVMTSMGQATW---SD----PHKAKTMLNRI----P-----LGKFAEVEHVV 216 (244)
T ss_dssp HHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSHHHHTTS---CS----HHHHHHHHTTC----T-----TCSCBCHHHHH
T ss_pred HHHHHHHHHHHHHHhCCCcEEEEEEeeCcCcChHHhhhc---cC----hHHHHHHHhcC----C-----CCCCcCHHHHH
Confidence 99999888754 45899999999998765321110 00 11111111111 1 12246678999
Q ss_pred HHHHHHHHHhccCCCCCcEEEecCC
Q 010075 310 NAMIVAMVAHAKQPSDANIYHVGSS 334 (519)
Q Consensus 310 ~aii~a~~~~~~~~~~~~iyni~s~ 334 (519)
++++.++.... .--.+++.++.+|
T Consensus 217 ~~v~fL~S~~a-~~itG~~i~vDGG 240 (244)
T d1pr9a_ 217 NAILFLLSDRS-GMTTGSTLPVEGG 240 (244)
T ss_dssp HHHHHHHSGGG-TTCCSCEEEESTT
T ss_pred HHHHHHhCchh-CCcCCcEEEECcc
Confidence 99998875432 2224678888776
|
| >d1q7ba_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Escherichia coli [TaxId: 562]
Probab=99.65 E-value=6.2e-16 Score=147.67 Aligned_cols=216 Identities=14% Similarity=0.145 Sum_probs=147.5
Q ss_pred cCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 010075 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (519)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (519)
++||+++||||++.||+++++.|++.| .+|++..|++. ..+.+. ++. ..+...
T Consensus 2 l~gK~alITGas~GIG~a~a~~l~~~G---~~Vv~~~r~~~---~l~~~~-------------~~~--------~~~~~~ 54 (243)
T d1q7ba_ 2 FEGKIALVTGASRGIGRAIAETLAARG---AKVIGTATSEN---GAQAIS-------------DYL--------GANGKG 54 (243)
T ss_dssp CTTCEEEESSCSSHHHHHHHHHHHHTT---CEEEEEESSHH---HHHHHH-------------HHH--------GGGEEE
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHcC---CEEEEEeCCHH---HHHHHH-------------HHh--------CCCCcE
Confidence 589999999999999999999999999 67888888642 222222 111 246788
Q ss_pred EeccCCCCCCCCChhhhHHHH-------hcCccEEEEcCccCCc-------cccHHHHHHHhHHHHHHHHHHHHhc---c
Q 010075 90 VPGDISSEDLGLKDSNLKEEL-------WNELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKC---V 152 (519)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l-------~~~vdiViH~Aa~v~f-------~~~~~~~~~~Nv~gt~~ll~~a~~~---~ 152 (519)
+.+|++++ +..+.+ ..++|++||+|+.... .+.++..+++|+.|+..+.+.+.+. +
T Consensus 55 ~~~Dv~~~-------~~v~~~~~~~~~~~g~iDilVnnAg~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~ 127 (243)
T d1q7ba_ 55 LMLNVTDP-------ASIESVLEKIRAEFGEVDILVNNAGITRDNLLMRMKDEEWNDIIETNLSSVFRLSKAVMRAMMKK 127 (243)
T ss_dssp EECCTTCH-------HHHHHHHHHHHHHTCSCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH
T ss_pred EEEEecCH-------HHhhhhhhhhhcccCCcceehhhhhhccccccccccccccccccceeechhhhhHHHHHHHHHHc
Confidence 99999963 222232 2469999999987643 2578888999999999988877432 3
Q ss_pred CCceEEEEecceeecCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcHHH
Q 010075 153 KLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYV 232 (519)
Q Consensus 153 ~l~~~V~vSTa~v~~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~Y~ 232 (519)
+-.++|++||....... .....|+
T Consensus 128 ~~G~II~isS~~~~~~~--------------------------------------------------------~~~~~Y~ 151 (243)
T d1q7ba_ 128 RHGRIITIGSVVGTMGN--------------------------------------------------------GGQANYA 151 (243)
T ss_dssp TCEEEEEECCHHHHHCC--------------------------------------------------------TTCHHHH
T ss_pred CCCEeeeecchhhcCCC--------------------------------------------------------CCCHHHH
Confidence 45789999997643211 1235799
Q ss_pred HHHHHHHHHHHHh-----hcCCcEEEEecCccccCCCCCCCcccccccccHHHHHHhhcCCceeeccCCCceeeeeeHHH
Q 010075 233 FTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDM 307 (519)
Q Consensus 233 ~sK~~aE~lv~~~-----~~~lp~~IvRPs~V~g~~~~p~~gw~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~d~vpVDd 307 (519)
.||+..+.+.+.. ..++.+..+.||.|-.+..+.. ............ ...-+...+|
T Consensus 152 asKaal~~lt~~lA~ela~~gIrVN~I~PG~i~T~~~~~~---------~~~~~~~~~~~~---------pl~R~~~ped 213 (243)
T d1q7ba_ 152 AAKAGLIGFSKSLAREVASRGITVNVVAPGFIETDMTRAL---------SDDQRAGILAQV---------PAGRLGGAQE 213 (243)
T ss_dssp HHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTS---------CHHHHHHHHTTC---------TTSSCBCHHH
T ss_pred HHHHHHHHHHHHHHHHhCccCeEEEEEecceEechhhhhh---------hhhHHHHHHhcC---------CCCCCCCHHH
Confidence 9999998888754 5679999999998865432111 111111111111 1122456889
Q ss_pred HHHHHHHHHHHhccCCCCCcEEEecCC
Q 010075 308 VVNAMIVAMVAHAKQPSDANIYHVGSS 334 (519)
Q Consensus 308 va~aii~a~~~~~~~~~~~~iyni~s~ 334 (519)
+|+++..++.... .--.+++.++.+|
T Consensus 214 vA~~v~fL~S~~s-~~itGq~i~vdGG 239 (243)
T d1q7ba_ 214 IANAVAFLASDEA-AYITGETLHVNGG 239 (243)
T ss_dssp HHHHHHHHHSGGG-TTCCSCEEEESTT
T ss_pred HHHHHHHHhCchh-cCCcCCeEEECCC
Confidence 9999998886332 2224788888777
|
| >d2ew8a1 c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenase {Azoarcus sp. ebn1 [TaxId: 76114]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: (s)-1-phenylethanol dehydrogenase species: Azoarcus sp. ebn1 [TaxId: 76114]
Probab=99.65 E-value=2.7e-15 Score=143.54 Aligned_cols=220 Identities=15% Similarity=0.130 Sum_probs=144.0
Q ss_pred cCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 010075 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (519)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (519)
++||+++||||++.||+++++.|++.| .+|++..|+.... ..+.++ + ...++..
T Consensus 3 L~gKvalVTGas~GIG~aia~~la~~G---a~V~~~~~~~~~~-~~~~~~--------------~--------~g~~~~~ 56 (247)
T d2ew8a1 3 LKDKLAVITGGANGIGRAIAERFAVEG---ADIAIADLVPAPE-AEAAIR--------------N--------LGRRVLT 56 (247)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHTT---CEEEEEESSCCHH-HHHHHH--------------H--------TTCCEEE
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCC---CEEEEEECCchHH-HHHHHH--------------H--------cCCcEEE
Confidence 789999999999999999999999999 6788888875421 111111 1 1367899
Q ss_pred EeccCCCCCCCCChhhhHHHH-------hcCccEEEEcCccCCc-------cccHHHHHHHhHHHHHHHHHHHHhc---c
Q 010075 90 VPGDISSEDLGLKDSNLKEEL-------WNELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKC---V 152 (519)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l-------~~~vdiViH~Aa~v~f-------~~~~~~~~~~Nv~gt~~ll~~a~~~---~ 152 (519)
+.+|++++ +..+.+ ..++|++||+||.... .+.++..+++|+.|+..+.+.+.+. +
T Consensus 57 ~~~Dvs~~-------~~v~~~~~~~~~~~G~iDilVnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~ 129 (247)
T d2ew8a1 57 VKCDVSQP-------GDVEAFGKQVISTFGRCDILVNNAGIYPLIPFDELTFEQWKKTFEINVDSGFLMAKAFVPGMKRN 129 (247)
T ss_dssp EECCTTCH-------HHHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH
T ss_pred EEeeCCCH-------HHHHHHHHHHHHHcCCCCEEEECCCCCCCCChHhCCHHHhhhhheeehhhhhHHHHHHHhHHHhc
Confidence 99999963 222233 3479999999998643 2678899999999999988876432 2
Q ss_pred CCceEEEEecceeecCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcHHH
Q 010075 153 KLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYV 232 (519)
Q Consensus 153 ~l~~~V~vSTa~v~~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~Y~ 232 (519)
+-.++|++||....... +....|+
T Consensus 130 ~~G~Iv~isS~~~~~~~--------------------------------------------------------~~~~~Y~ 153 (247)
T d2ew8a1 130 GWGRIINLTSTTYWLKI--------------------------------------------------------EAYTHYI 153 (247)
T ss_dssp TCEEEEEECCGGGGSCC--------------------------------------------------------SSCHHHH
T ss_pred CCCCccccccchhcccC--------------------------------------------------------cccccch
Confidence 45789999997643211 1235799
Q ss_pred HHHHHHHHHHHHh-----hcCCcEEEEecCccccCCCCCCCcccccccccHHHHHHhhcCCceeeccCCCceeeeeeHHH
Q 010075 233 FTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDM 307 (519)
Q Consensus 233 ~sK~~aE~lv~~~-----~~~lp~~IvRPs~V~g~~~~p~~gw~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~d~vpVDd 307 (519)
.||+..+.+.+.. ..++.+..+-||.|-.+..+.... . ...... ........-+.-.+|
T Consensus 154 asKaal~~ltk~lA~ela~~gIrVN~I~PG~i~T~~~~~~~~--~------~~~~~~--------~~~~~~l~r~~~ped 217 (247)
T d2ew8a1 154 STKAANIGFTRALASDLGKDGITVNAIAPSLVRTATTEASAL--S------AMFDVL--------PNMLQAIPRLQVPLD 217 (247)
T ss_dssp HHHHHHHHHHHHHHHHHGGGTEEEEEEEECCC----------------------------------CTTSSSCSCCCTHH
T ss_pred hhhccHHHHHHHHHHHhcccCeEEEEEeeCCCCCcccccccc--c------hhHHHH--------HHHhccCCCCCCHHH
Confidence 9999988887754 557999999999987654321100 0 000000 000001112345689
Q ss_pred HHHHHHHHHHHhccCCCCCcEEEecCCC
Q 010075 308 VVNAMIVAMVAHAKQPSDANIYHVGSSL 335 (519)
Q Consensus 308 va~aii~a~~~~~~~~~~~~iyni~s~~ 335 (519)
+|++++.++.... .--.+++.++.+|-
T Consensus 218 vA~~v~fL~S~~s-~~itG~~i~vDGG~ 244 (247)
T d2ew8a1 218 LTGAAAFLASDDA-SFITGQTLAVDGGM 244 (247)
T ss_dssp HHHHHHHHTSGGG-TTCCSCEEEESSSC
T ss_pred HHHHHHHHhCchh-cCCcCCeEEECCCE
Confidence 9999998876432 22247888887773
|
| >d1hdca_ c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydrogenase {Streptomyces hydrogenans [TaxId: 1905]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 3-alpha,20-beta-hydroxysteroid dehydrogenase species: Streptomyces hydrogenans [TaxId: 1905]
Probab=99.64 E-value=2.2e-15 Score=144.71 Aligned_cols=218 Identities=13% Similarity=0.075 Sum_probs=145.5
Q ss_pred cCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 010075 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (519)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (519)
++||+++||||++.||+++++.|++.| .+|++..|+.. ++.+ +.++. ..++.+
T Consensus 3 L~gK~alVTGas~GIG~aia~~la~~G---a~V~~~~r~~~------~~~~----------~~~~~--------~~~~~~ 55 (254)
T d1hdca_ 3 LSGKTVIITGGARGLGAEAARQAVAAG---ARVVLADVLDE------EGAA----------TAREL--------GDAARY 55 (254)
T ss_dssp CCCSEEEEETTTSHHHHHHHHHHHHTT---CEEEEEESCHH------HHHH----------HHHTT--------GGGEEE
T ss_pred CCCCEEEEeCcCCHHHHHHHHHHHHCC---CEEEEEECCHH------HHHH----------HHHHh--------CCceEE
Confidence 689999999999999999999999999 67888888642 2221 11111 357889
Q ss_pred EeccCCCCCCCCChhhhHHHH-------hcCccEEEEcCccCCc-------cccHHHHHHHhHHHHHHHHHHHHhc---c
Q 010075 90 VPGDISSEDLGLKDSNLKEEL-------WNELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKC---V 152 (519)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l-------~~~vdiViH~Aa~v~f-------~~~~~~~~~~Nv~gt~~ll~~a~~~---~ 152 (519)
+.+|++++ +..+.+ ..++|++||+|+.... .+.++..+++|+.|+..+.+.+.+. +
T Consensus 56 ~~~Dv~~~-------~~v~~~~~~~~~~~g~iDilVnnAg~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~p~m~~~ 128 (254)
T d1hdca_ 56 QHLDVTIE-------EDWQRVVAYAREEFGSVDGLVNNAGISTGMFLETESVERFRKVVEINLTGVFIGMKTVIPAMKDA 128 (254)
T ss_dssp EECCTTCH-------HHHHHHHHHHHHHHSCCCEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH
T ss_pred EEcccCCH-------HHHHHHHHHHHHHcCCccEEEecCccccccccccccccccchhhhHHhhHHHHHHHHHHHHHhhc
Confidence 99999963 222333 2479999999998643 2568888999999999988877432 3
Q ss_pred CCceEEEEecceeecCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcHHH
Q 010075 153 KLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYV 232 (519)
Q Consensus 153 ~l~~~V~vSTa~v~~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~Y~ 232 (519)
+-.++|++||....... .....|+
T Consensus 129 ~~G~II~isS~~~~~~~--------------------------------------------------------~~~~~Y~ 152 (254)
T d1hdca_ 129 GGGSIVNISSAAGLMGL--------------------------------------------------------ALTSSYG 152 (254)
T ss_dssp TCEEEEEECCGGGTSCC--------------------------------------------------------TTCHHHH
T ss_pred CCCeecccccchhcccc--------------------------------------------------------cchhhHH
Confidence 55799999998653211 1235799
Q ss_pred HHHHHHHHHHHHh-----hcCCcEEEEecCccccCCCCCCCcccccccccHHHHHHhhcCCceeeccCCCceeeeeeHHH
Q 010075 233 FTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDM 307 (519)
Q Consensus 233 ~sK~~aE~lv~~~-----~~~lp~~IvRPs~V~g~~~~p~~gw~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~d~vpVDd 307 (519)
.||+..+.+.+.. ..++.+..+-||.|-.+.....+ .. .........+ -.+ --...+|
T Consensus 153 asKaal~~lt~~lA~e~a~~gIrVN~I~PG~v~T~~~~~~~---~~----------~~~~~~~~~p---l~R-~g~~Ped 215 (254)
T d1hdca_ 153 ASKWGVRGLSKLAAVELGTDRIRVNSVHPGMTYTPMTAETG---IR----------QGEGNYPNTP---MGR-VGNEPGE 215 (254)
T ss_dssp HHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHT---CC----------CSTTSCTTST---TSS-CB-CHHH
T ss_pred HHHHHHHHHHHHHHHHhCCCceEEEEeeeCcccCccchhcC---HH----------HHHHHHhCCC---CCC-CCCCHHH
Confidence 9999998888754 45799999999988653210000 00 0000000001 000 0123589
Q ss_pred HHHHHHHHHHHhccCCCCCcEEEecCCC
Q 010075 308 VVNAMIVAMVAHAKQPSDANIYHVGSSL 335 (519)
Q Consensus 308 va~aii~a~~~~~~~~~~~~iyni~s~~ 335 (519)
||++++.++.... .--.++++++.+|-
T Consensus 216 vA~~v~fL~S~~a-~~itG~~i~vDGG~ 242 (254)
T d1hdca_ 216 IAGAVVKLLSDTS-SYVTGAELAVDGGW 242 (254)
T ss_dssp HHHHHHHHHSGGG-TTCCSCEEEESTTT
T ss_pred HHHHHHHHhchhh-CCCCCceEEeCCCc
Confidence 9999998885432 22247899998773
|
| >d1vl8a_ c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Gluconate 5-dehydrogenase species: Thermotoga maritima [TaxId: 2336]
Probab=99.64 E-value=4.2e-15 Score=142.51 Aligned_cols=222 Identities=14% Similarity=0.091 Sum_probs=147.0
Q ss_pred cCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 010075 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (519)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (519)
++||+++||||++.||+++++.|++.| .+|++..|+.... +... +.+.++. ..++.+
T Consensus 3 l~gK~~lITGas~GIG~aia~~la~~G---a~V~i~~r~~~~~---~~~~---------~~l~~~~--------g~~~~~ 59 (251)
T d1vl8a_ 3 LRGRVALVTGGSRGLGFGIAQGLAEAG---CSVVVASRNLEEA---SEAA---------QKLTEKY--------GVETMA 59 (251)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTT---CEEEEEESCHHHH---HHHH---------HHHHHHH--------CCCEEE
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCC---CEEEEEECCHHHH---HHHH---------HHHHHHh--------CCcEEE
Confidence 679999999999999999999999999 6788888864221 1111 1122222 257889
Q ss_pred EeccCCCCCCCCChhhhHHHH-------hcCccEEEEcCccCCc-------cccHHHHHHHhHHHHHHHHHHHHh-c--c
Q 010075 90 VPGDISSEDLGLKDSNLKEEL-------WNELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKK-C--V 152 (519)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l-------~~~vdiViH~Aa~v~f-------~~~~~~~~~~Nv~gt~~ll~~a~~-~--~ 152 (519)
+.+|++++ +..+.+ ..++|++||+||.... .+.++..+++|+.|+..+.+.+.+ + +
T Consensus 60 ~~~Dv~~~-------~~v~~~~~~~~~~~g~iDiLVnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~ 132 (251)
T d1vl8a_ 60 FRCDVSNY-------EEVKKLLEAVKEKFGKLDTVVNAAGINRRHPAEEFPLDEFRQVIEVNLFGTYYVCREAFSLLRES 132 (251)
T ss_dssp EECCTTCH-------HHHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTC
T ss_pred EEccCCCH-------HHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHhhhhhhhhhhhhhhhccccc
Confidence 99999963 222232 2479999999997542 257888999999999999887644 3 2
Q ss_pred CCceEEEEecceee-cCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcHH
Q 010075 153 KLKVFVHVSTAYVA-GERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTY 231 (519)
Q Consensus 153 ~l~~~V~vSTa~v~-~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~Y 231 (519)
+-.++|++||.... ... .....|
T Consensus 133 ~~G~Ii~i~S~~~~~~~~--------------------------------------------------------~~~~~Y 156 (251)
T d1vl8a_ 133 DNPSIINIGSLTVEEVTM--------------------------------------------------------PNISAY 156 (251)
T ss_dssp SSCEEEEECCGGGTCCCS--------------------------------------------------------SSCHHH
T ss_pred ccccccccccchhccccC--------------------------------------------------------ccccch
Confidence 34589999885431 110 123479
Q ss_pred HHHHHHHHHHHHHh-----hcCCcEEEEecCccccCCCCCCCcccccccccHHHHHHhhcCCceeeccCCCceeeeeeHH
Q 010075 232 VFTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVD 306 (519)
Q Consensus 232 ~~sK~~aE~lv~~~-----~~~lp~~IvRPs~V~g~~~~p~~gw~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~d~vpVD 306 (519)
+.||+..+.+.+.. ..++.+..|-||.|-.+..+.. .............. + ..-+.-.+
T Consensus 157 ~asKaal~~lt~~lA~e~~~~gIrVN~I~PG~i~T~~~~~~-------~~~~~~~~~~~~~~----p-----l~R~~~pe 220 (251)
T d1vl8a_ 157 AASKGGVASLTKALAKEWGRYGIRVNVIAPGWYRTKMTEAV-------FSDPEKLDYMLKRI----P-----LGRTGVPE 220 (251)
T ss_dssp HHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSTTTHHH-------HTCHHHHHHHHHTC----T-----TSSCBCGG
T ss_pred HHHHHhHHHHHHHHHHHhcccCeEEEEEeeCcccCHHHHhc-------cCCHHHHHHHHhcC----C-----CCCCCCHH
Confidence 99999999888754 5689999999999866543210 01111122222111 1 11234568
Q ss_pred HHHHHHHHHHHHhccCCCCCcEEEecCC
Q 010075 307 MVVNAMIVAMVAHAKQPSDANIYHVGSS 334 (519)
Q Consensus 307 dva~aii~a~~~~~~~~~~~~iyni~s~ 334 (519)
|+|++++.++.... .--.++++.+.+|
T Consensus 221 dvA~~v~fL~S~~a-~~itG~~i~vDGG 247 (251)
T d1vl8a_ 221 DLKGVAVFLASEEA-KYVTGQIIFVDGG 247 (251)
T ss_dssp GGHHHHHHHHSGGG-TTCCSCEEEESTT
T ss_pred HHHHHHHHHhCchh-CCCcCcEEEeCcC
Confidence 89999998876432 2224788888776
|
| >d1fmca_ c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 7-alpha-hydroxysteroid dehydrogenase species: Escherichia coli [TaxId: 562]
Probab=99.64 E-value=2e-15 Score=145.12 Aligned_cols=230 Identities=16% Similarity=0.125 Sum_probs=149.0
Q ss_pred cCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 010075 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (519)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (519)
++||+++||||++.||++++++|++.| .+|++..|+.. ..+++.+++ ++. ..++.+
T Consensus 9 L~gK~alITGas~GIG~aia~~la~~G---a~V~~~~r~~~---~~~~~~~~l---------~~~---------g~~~~~ 64 (255)
T d1fmca_ 9 LDGKCAIITGAGAGIGKEIAITFATAG---ASVVVSDINAD---AANHVVDEI---------QQL---------GGQAFA 64 (255)
T ss_dssp CTTCEEEETTTTSHHHHHHHHHHHTTT---CEEEEEESCHH---HHHHHHHHH---------HHT---------TCCEEE
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCC---CEEEEEECCHH---HHHHHHHHH---------HHc---------CCcEEE
Confidence 689999999999999999999999999 67888888642 222222221 111 257889
Q ss_pred EeccCCCCCCCCChhhhHHHHhcCccEEEEcCccCCc------cccHHHHHHHhHHHHHHHHHHHHh-c--cCCceEEEE
Q 010075 90 VPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF------DERYDVAFGINTLGVIHLVNFAKK-C--VKLKVFVHV 160 (519)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~~~vdiViH~Aa~v~f------~~~~~~~~~~Nv~gt~~ll~~a~~-~--~~l~~~V~v 160 (519)
+.+|+++++---.-.+...+...++|++||+||.... .+.++..+++|+.|+..+.+.+.. + ++-.++|++
T Consensus 65 ~~~Dvs~~~~~~~~~~~~~~~~g~iDilvnnAG~~~~~~~e~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~g~Ii~i 144 (255)
T d1fmca_ 65 CRCDITSEQELSALADFAISKLGKVDILVNNAGGGGPKPFDMPMADFRRAYELNVFSFFHLSQLVAPEMEKNGGGVILTI 144 (255)
T ss_dssp EECCTTCHHHHHHHHHHHHHHHSSCCEEEECCCCCCCCCTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEE
T ss_pred EEccCCCHHHHHHHHHHHHHHcCCCCEeeeCCcCCCCCcccCCHHHHHHHHHHHHHHhhhhHHHHHhhhccccccccccc
Confidence 9999996321000000111223579999999997532 256888899999999988876643 2 244578999
Q ss_pred ecceeecCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcHHHHHHHHHHH
Q 010075 161 STAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEM 240 (519)
Q Consensus 161 STa~v~~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~Y~~sK~~aE~ 240 (519)
||....... .....|+.||+..+.
T Consensus 145 sS~~~~~~~--------------------------------------------------------~~~~~Y~asKaal~~ 168 (255)
T d1fmca_ 145 TSMAAENKN--------------------------------------------------------INMTSYASSKAAASH 168 (255)
T ss_dssp CCGGGTCCC--------------------------------------------------------TTCHHHHHHHHHHHH
T ss_pred cccchhccc--------------------------------------------------------cccccchhHHHHHHH
Confidence 987543211 123579999999988
Q ss_pred HHHHh-----hcCCcEEEEecCccccCCCCCCCcccccccccHHHHHHhhcCCceeeccCCCceeeeeeHHHHHHHHHHH
Q 010075 241 LMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMIVA 315 (519)
Q Consensus 241 lv~~~-----~~~lp~~IvRPs~V~g~~~~p~~gw~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~d~vpVDdva~aii~a 315 (519)
+.+.. ..++.+..|-||.|-.+..... ............. + ..-+...+|+|+++..+
T Consensus 169 lt~~lA~el~~~gIrVN~I~PG~i~T~~~~~~--------~~~e~~~~~~~~~----p-----l~R~g~pedvA~~v~fL 231 (255)
T d1fmca_ 169 LVRNMAFDLGEKNIRVNGIAPGAILTDALKSV--------ITPEIEQKMLQHT----P-----IRRLGQPQDIANAALFL 231 (255)
T ss_dssp HHHHHHHHHHTTTEEEEEEEECSBCSHHHHTT--------CCHHHHHHHHHTC----S-----SCSCBCHHHHHHHHHHH
T ss_pred HHHHHHHHhCccCeEEEEeeeCcCcChHhhcc--------CCHHHHHHHHhcC----C-----CCCCcCHHHHHHHHHHH
Confidence 88754 4579999999998865422110 0111222222211 1 11235578999999998
Q ss_pred HHHhccCCCCCcEEEecCCCCC
Q 010075 316 MVAHAKQPSDANIYHVGSSLRN 337 (519)
Q Consensus 316 ~~~~~~~~~~~~iyni~s~~~~ 337 (519)
+.... .--.+++..+.+|...
T Consensus 232 ~S~~s-~~itG~~i~vDGG~~~ 252 (255)
T d1fmca_ 232 CSPAA-SWVSGQILTVSGGGVQ 252 (255)
T ss_dssp HSGGG-TTCCSCEEEESTTSCC
T ss_pred hCchh-cCCcCCEEEECcCccc
Confidence 85332 2224788999888543
|
| >d1x1ta1 c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas fragi [TaxId: 296]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: D(-)-3-hydroxybutyrate dehydrogenase species: Pseudomonas fragi [TaxId: 296]
Probab=99.64 E-value=2.2e-15 Score=145.32 Aligned_cols=232 Identities=16% Similarity=0.164 Sum_probs=146.3
Q ss_pred cCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 010075 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (519)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (519)
++||++|||||++.||++++++|++.| .+|++..|+... ..+.+.+++ .++. ..++.+
T Consensus 2 L~gK~alITGas~GIG~aiA~~la~~G---a~V~~~~r~~~~--~~~~~~~~~---------~~~~--------g~~~~~ 59 (260)
T d1x1ta1 2 LKGKVAVVTGSTSGIGLGIATALAAQG---ADIVLNGFGDAA--EIEKVRAGL---------AAQH--------GVKVLY 59 (260)
T ss_dssp CTTCEEEETTCSSHHHHHHHHHHHHTT---CEEEEECCSCHH--HHHHHHHHH---------HHHH--------TSCEEE
T ss_pred CCcCEEEEeCCCCHHHHHHHHHHHHCC---CEEEEEeCCcHH--HHHHHHHHH---------HHhc--------CCcEEE
Confidence 689999999999999999999999999 678888886422 122222111 1221 357899
Q ss_pred EeccCCCCCCCCChhhhHHHHh-------cCccEEEEcCccCCc-------cccHHHHHHHhHHHHHHHHHHHHhc---c
Q 010075 90 VPGDISSEDLGLKDSNLKEELW-------NELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKC---V 152 (519)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~-------~~vdiViH~Aa~v~f-------~~~~~~~~~~Nv~gt~~ll~~a~~~---~ 152 (519)
+.+|++++ +..+.++ .++|++||+||.... .+.++..+++|+.|+..+.+.+.+. +
T Consensus 60 ~~~Dv~~~-------~~v~~~~~~~~~~~G~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~ 132 (260)
T d1x1ta1 60 DGADLSKG-------EAVRGLVDNAVRQMGRIDILVNNAGIQHTALIEDFPTEKWDAILALNLSAVFHGTAAALPHMKKQ 132 (260)
T ss_dssp ECCCTTSH-------HHHHHHHHHHHHHHSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH
T ss_pred EECCCCCH-------HHHHHHHHHHHHHhCCCcEEEeecccccCCchhhhhHHhhhhhhhccccccccccchhhhhHhhc
Confidence 99999963 2223332 469999999997642 2678899999999998887766432 2
Q ss_pred CCceEEEEecceeecCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcHHH
Q 010075 153 KLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYV 232 (519)
Q Consensus 153 ~l~~~V~vSTa~v~~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~Y~ 232 (519)
+-.++|++||....... +....|+
T Consensus 133 ~~G~Iv~isS~~~~~~~--------------------------------------------------------~~~~~Y~ 156 (260)
T d1x1ta1 133 GFGRIINIASAHGLVAS--------------------------------------------------------ANKSAYV 156 (260)
T ss_dssp TCEEEEEECCGGGTSCC--------------------------------------------------------TTCHHHH
T ss_pred CCceEeecccccceecc--------------------------------------------------------CCcchhh
Confidence 45689999998653211 1235799
Q ss_pred HHHHHHHHHHHHh-----hcCCcEEEEecCccccCCCCCC-CcccccccccHHHHHHhhcCCceeeccCCCceeeeeeHH
Q 010075 233 FTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPF-PGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVD 306 (519)
Q Consensus 233 ~sK~~aE~lv~~~-----~~~lp~~IvRPs~V~g~~~~p~-~gw~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~d~vpVD 306 (519)
.||+..+.+.+.. ..++.+..+.||.|-.+..+.. ....+. .+... .... ...........-+...+
T Consensus 157 asKaal~~lt~~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~-~~~~~--~~~~----~~~~~~~~Pl~R~g~pe 229 (260)
T d1x1ta1 157 AAKHGVVGFTKVTALETAGQGITANAICPGWVRTPLVEKQISALAEK-NGVDQ--ETAA----RELLSEKQPSLQFVTPE 229 (260)
T ss_dssp HHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCC-------------------------------CHHHHCTTCCCBCHH
T ss_pred hhhhhHHHhHHHHHHHhchhCcEEEEEecCCCCChhhhhhhhhhhhh-cCCCh--HHHH----HHHHHhcCCCCCCcCHH
Confidence 9999988887754 4579999999999876543211 000000 00000 0000 00000000112246688
Q ss_pred HHHHHHHHHHHHhccCCCCCcEEEecCC
Q 010075 307 MVVNAMIVAMVAHAKQPSDANIYHVGSS 334 (519)
Q Consensus 307 dva~aii~a~~~~~~~~~~~~iyni~s~ 334 (519)
|+|++++.++.... .--.+++.++.+|
T Consensus 230 diA~~v~fL~S~~a-~~itG~~i~vDGG 256 (260)
T d1x1ta1 230 QLGGTAVFLASDAA-AQITGTTVSVDGG 256 (260)
T ss_dssp HHHHHHHHHHSGGG-TTCCSCEEEESTT
T ss_pred HHHHHHHHHhChhh-CCCcCCEEEECcc
Confidence 99999998886432 2224788888776
|
| >d1geea_ c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megaterium [TaxId: 1404]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Glucose dehydrogenase species: Bacillus megaterium [TaxId: 1404]
Probab=99.63 E-value=4.2e-15 Score=143.34 Aligned_cols=222 Identities=14% Similarity=0.092 Sum_probs=147.8
Q ss_pred cCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 010075 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (519)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (519)
++||+++||||++.||++++++|++.| .+|++..|+... ..+.+.++ +++ ...++..
T Consensus 5 L~gK~alITGas~GIG~aia~~la~~G---~~Vv~~~r~~~~--~~~~~~~~---------~~~---------~g~~~~~ 61 (261)
T d1geea_ 5 LEGKVVVITGSSTGLGKSMAIRFATEK---AKVVVNYRSKED--EANSVLEE---------IKK---------VGGEAIA 61 (261)
T ss_dssp GTTCEEEETTCSSHHHHHHHHHHHHTT---CEEEEEESSCHH--HHHHHHHH---------HHH---------TTCEEEE
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCC---CEEEEEeCCcHH--HHHHHHHH---------HHh---------cCCcEEE
Confidence 789999999999999999999999999 688898987532 12222211 111 1257889
Q ss_pred EeccCCCCCCCCChhhhHHHHh-------cCccEEEEcCccCCc-------cccHHHHHHHhHHHHHHHHHHHHh-c---
Q 010075 90 VPGDISSEDLGLKDSNLKEELW-------NELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKK-C--- 151 (519)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~-------~~vdiViH~Aa~v~f-------~~~~~~~~~~Nv~gt~~ll~~a~~-~--- 151 (519)
+.+|++++ +..+.++ .++|++||+||.... .+.++..+++|+.|+..+.+.+.+ +
T Consensus 62 ~~~Dvt~~-------~~v~~~~~~~~~~~G~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~ 134 (261)
T d1geea_ 62 VKGDVTVE-------SDVINLVQSAIKEFGKLDVMINNAGLENPVSSHEMSLSDWNKVIDTNLTGAFLGSREAIKYFVEN 134 (261)
T ss_dssp EECCTTSH-------HHHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHT
T ss_pred EEccCCCH-------HHHHHHHHHHHHHhCCCCEeeccceecCCcchhhcCHHHHHHHHHHhcccchhHHHHHhhhhccc
Confidence 99999963 2222332 479999999998643 257888999999999888877643 2
Q ss_pred cCCceEEEEecceeecCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcHH
Q 010075 152 VKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTY 231 (519)
Q Consensus 152 ~~l~~~V~vSTa~v~~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~Y 231 (519)
+.-..+|++||....... +....|
T Consensus 135 ~~g~~Iv~isS~~~~~~~--------------------------------------------------------~~~~~Y 158 (261)
T d1geea_ 135 DIKGTVINMSSVHEKIPW--------------------------------------------------------PLFVHY 158 (261)
T ss_dssp TCCCEEEEECCGGGTSCC--------------------------------------------------------TTCHHH
T ss_pred cccccccccccchhcccC--------------------------------------------------------cccccc
Confidence 223458889987543211 123579
Q ss_pred HHHHHHHHHHHHHh-----hcCCcEEEEecCccccCCCCCCCcccccccccHHHHHHhhcCCceeeccCCCceeeeeeHH
Q 010075 232 VFTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVD 306 (519)
Q Consensus 232 ~~sK~~aE~lv~~~-----~~~lp~~IvRPs~V~g~~~~p~~gw~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~d~vpVD 306 (519)
+.||+..+.+.+.. ..++.+..|-||.|-.+... .. .........+.... ...-+...+
T Consensus 159 ~asKaal~~lt~~lA~e~~~~gIrVN~I~PG~v~T~~~~------~~-~~~~~~~~~~~~~~---------pl~R~~~pe 222 (261)
T d1geea_ 159 AASKGGMKLMTETLALEYAPKGIRVNNIGPGAINTPINA------EK-FADPEQRADVESMI---------PMGYIGEPE 222 (261)
T ss_dssp HHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSGGGH------HH-HHSHHHHHHHHTTC---------TTSSCBCHH
T ss_pred ccCCccchhhHHHHHHHhhhhCcEEEEEeeCcCcCHhHh------hh-cCCHHHHHHHHhcC---------CCCCCCCHH
Confidence 99999998888754 55799999999998654321 00 00111111111111 111245679
Q ss_pred HHHHHHHHHHHHhccCCCCCcEEEecCC
Q 010075 307 MVVNAMIVAMVAHAKQPSDANIYHVGSS 334 (519)
Q Consensus 307 dva~aii~a~~~~~~~~~~~~iyni~s~ 334 (519)
|+|++++.++.... .--.++++.+.+|
T Consensus 223 diA~~v~fL~S~~s-~~itG~~i~vDGG 249 (261)
T d1geea_ 223 EIAAVAAWLASSEA-SYVTGITLFADGG 249 (261)
T ss_dssp HHHHHHHHHHSGGG-TTCCSCEEEESTT
T ss_pred HHHHHHHHHhCchh-cCCcCCeEEECCC
Confidence 99999998885332 2224788999887
|
| >d1ulsa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Thermus thermophilus [TaxId: 274]
Probab=99.63 E-value=6.7e-15 Score=140.29 Aligned_cols=214 Identities=14% Similarity=0.103 Sum_probs=144.0
Q ss_pred cCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 010075 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (519)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (519)
++||+++||||++.||++++++|++.| .+|++..|+.. ..+.+. + .-+..+
T Consensus 3 L~gK~~lITGas~GIG~aia~~l~~~G---~~V~~~~r~~~---~l~~~~-------------~----------~~~~~~ 53 (242)
T d1ulsa_ 3 LKDKAVLITGAAHGIGRATLELFAKEG---ARLVACDIEEG---PLREAA-------------E----------AVGAHP 53 (242)
T ss_dssp TTTCEEEEESTTSHHHHHHHHHHHHTT---CEEEEEESCHH---HHHHHH-------------H----------TTTCEE
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCC---CEEEEEECCHH---HHHHHH-------------H----------HcCCeE
Confidence 579999999999999999999999999 67899888632 111111 1 124678
Q ss_pred EeccCCCCCCCCChhhhHHHH-------hcCccEEEEcCccCCc-------cccHHHHHHHhHHHHHHHHHHHHhc---c
Q 010075 90 VPGDISSEDLGLKDSNLKEEL-------WNELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKC---V 152 (519)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l-------~~~vdiViH~Aa~v~f-------~~~~~~~~~~Nv~gt~~ll~~a~~~---~ 152 (519)
+.+|+++++ ..+.+ ..++|++||+||.... .+.++..+++|+.|+..+.+.+.+. +
T Consensus 54 ~~~Dv~~~~-------~v~~~~~~~~~~~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~ 126 (242)
T d1ulsa_ 54 VVMDVADPA-------SVERGFAEALAHLGRLDGVVHYAGITRDNFHWKMPLEDWELVLRVNLTGSFLVAKAASEAMREK 126 (242)
T ss_dssp EECCTTCHH-------HHHHHHHHHHHHHSSCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTT
T ss_pred EEEecCCHH-------HHHHHHHHHHHhcCCceEEEECCcccccCchhhCcchhhhccccccchhhhhhhhhcccccccc
Confidence 899999632 22232 2469999999997642 2578899999999999998876543 2
Q ss_pred CCceEEEEecceeecCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcHHH
Q 010075 153 KLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYV 232 (519)
Q Consensus 153 ~l~~~V~vSTa~v~~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~Y~ 232 (519)
+-..++.+||+...+. .....|+
T Consensus 127 ~~~~i~~~ss~~~~~~---------------------------------------------------------~~~~~Y~ 149 (242)
T d1ulsa_ 127 NPGSIVLTASRVYLGN---------------------------------------------------------LGQANYA 149 (242)
T ss_dssp CCEEEEEECCGGGGCC---------------------------------------------------------TTCHHHH
T ss_pred ccceeeeeccccccCC---------------------------------------------------------CCCcchH
Confidence 3456677776532221 1235799
Q ss_pred HHHHHHHHHHHHh-----hcCCcEEEEecCccccCCCCCCCcccccccccHHHHHHhhcCCceeeccCCCceeeeeeHHH
Q 010075 233 FTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDM 307 (519)
Q Consensus 233 ~sK~~aE~lv~~~-----~~~lp~~IvRPs~V~g~~~~p~~gw~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~d~vpVDd 307 (519)
.||+..+.+.+.. ..++.+..+-||.|-.+..+..+ ........... + ..-+...+|
T Consensus 150 asKaal~~ltk~lA~ela~~gIrVN~I~PG~v~T~~~~~~~---------~~~~~~~~~~~----p-----l~R~~~ped 211 (242)
T d1ulsa_ 150 ASMAGVVGLTRTLALELGRWGIRVNTLAPGFIETRMTAKVP---------EKVREKAIAAT----P-----LGRAGKPLE 211 (242)
T ss_dssp HHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTTSSSC---------HHHHHHHHHTC----T-----TCSCBCHHH
T ss_pred HHHHHHHHHHHHHHHHHhhhCcEEEEEeeCcccChhhhcCC---------HHHHHHHHhcC----C-----CCCCCCHHH
Confidence 9999998887754 45799999999999765443221 11122211111 1 112345789
Q ss_pred HHHHHHHHHHHhccCCCCCcEEEecCCC
Q 010075 308 VVNAMIVAMVAHAKQPSDANIYHVGSSL 335 (519)
Q Consensus 308 va~aii~a~~~~~~~~~~~~iyni~s~~ 335 (519)
+|+++..++.... .--.+++..+.+|.
T Consensus 212 ia~~v~fL~S~~s-~~itG~~i~vDGG~ 238 (242)
T d1ulsa_ 212 VAYAALFLLSDES-SFITGQVLFVDGGR 238 (242)
T ss_dssp HHHHHHHHHSGGG-TTCCSCEEEESTTT
T ss_pred HHHHHHHHhchhh-CCCCCcEEEECCCc
Confidence 9999998886432 22247888887773
|
| >d2bgka1 c.2.1.2 (A:11-278) Rhizome secoisolariciresinol dehydrogenase {Mayapple (Podophyllum peltatum) [TaxId: 35933]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Rhizome secoisolariciresinol dehydrogenase species: Mayapple (Podophyllum peltatum) [TaxId: 35933]
Probab=99.63 E-value=5.8e-15 Score=142.94 Aligned_cols=225 Identities=16% Similarity=0.220 Sum_probs=149.1
Q ss_pred hcCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceE
Q 010075 9 FLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKIT 88 (519)
Q Consensus 9 ~~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~ 88 (519)
-++||+++||||++.||+++++.|++.| .+|++..|+.. ..+++.+++ .. ..++.
T Consensus 3 rL~gKvalITGas~GIG~aia~~la~~G---a~V~i~~r~~~---~~~~~~~~l-------------~~------~~~~~ 57 (268)
T d2bgka1 3 RLQDKVAIITGGAGGIGETTAKLFVRYG---AKVVIADIADD---HGQKVCNNI-------------GS------PDVIS 57 (268)
T ss_dssp TTTTCEEEEESTTSHHHHHHHHHHHHTT---CEEEEEESCHH---HHHHHHHHH-------------CC------TTTEE
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCC---CEEEEEECCHH---HHHHHHHHh-------------cC------CCceE
Confidence 4789999999999999999999999999 67888888632 222222211 10 25678
Q ss_pred EEeccCCCCCCCCChhhhHHHH-------hcCccEEEEcCccCC-----c----cccHHHHHHHhHHHHHHHHHHHHh-c
Q 010075 89 FVPGDISSEDLGLKDSNLKEEL-------WNELDIMVNSAAITK-----F----DERYDVAFGINTLGVIHLVNFAKK-C 151 (519)
Q Consensus 89 ~v~gDl~~~~lgls~~~~~~~l-------~~~vdiViH~Aa~v~-----f----~~~~~~~~~~Nv~gt~~ll~~a~~-~ 151 (519)
++.+|+++++ + .+.+ ..++|++||+||... + .+.++..+++|+.|+..+.+.+.+ +
T Consensus 58 ~~~~Dv~~~~------~-v~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m 130 (268)
T d2bgka1 58 FVHCDVTKDE------D-VRNLVDTTIAKHGKLDIMFGNVGVLSTTPYSILEAGNEDFKRVMDINVYGAFLVAKHAARVM 130 (268)
T ss_dssp EEECCTTCHH------H-HHHHHHHHHHHHSCCCEEEECCCCCCSSCSSTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHH
T ss_pred EEEccCCCHH------H-HHHHHHHHHHHcCCcceeccccccccCCCcccccCcHHHHHHHHHHhhcchhhhhhhhcchH
Confidence 8999999632 2 2233 247999999999643 1 146888899999999998887643 3
Q ss_pred --cCCceEEEEecceeecCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCc
Q 010075 152 --VKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPN 229 (519)
Q Consensus 152 --~~l~~~V~vSTa~v~~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n 229 (519)
.+-.++|++||........ +...
T Consensus 131 ~~~~~g~ii~iss~~~~~~~~-------------------------------------------------------~~~~ 155 (268)
T d2bgka1 131 IPAKKGSIVFTASISSFTAGE-------------------------------------------------------GVSH 155 (268)
T ss_dssp GGGTCEEEEEECCGGGTCCCT-------------------------------------------------------TSCH
T ss_pred hhcCCCCcccccccccccccc-------------------------------------------------------cccc
Confidence 2456889998875432110 2234
Q ss_pred HHHHHHHHHHHHHHHh-----hcCCcEEEEecCccccCCCCCCCcccccccccHHHHHHhhcCCceeeccCCCceeeeee
Q 010075 230 TYVFTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIP 304 (519)
Q Consensus 230 ~Y~~sK~~aE~lv~~~-----~~~lp~~IvRPs~V~g~~~~p~~gw~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~d~vp 304 (519)
.|+.||+..+.+.+.. ..++.+..|-||.|-.+......+.. ..-......... . ...-+..
T Consensus 156 ~Y~asKaal~~lt~~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~------~~~~~~~~~~~~-----~--~~gr~~~ 222 (268)
T d2bgka1 156 VYTATKHAVLGLTTSLCTELGEYGIRVNCVSPYIVASPLLTDVFGVD------SSRVEELAHQAA-----N--LKGTLLR 222 (268)
T ss_dssp HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCCSCCCCTTSSSCC------HHHHHHHHHHTC-----S--SCSCCCC
T ss_pred ccchhHHHHHhCHHHHHHHhChhCeEEEecCCCCccChHHhhhhcCC------HHHHHHHHHhcc-----c--cCCCCcC
Confidence 7999999999888754 45799999999999776543221111 111111110000 0 1112456
Q ss_pred HHHHHHHHHHHHHHhccCCCCCcEEEecCC
Q 010075 305 VDMVVNAMIVAMVAHAKQPSDANIYHVGSS 334 (519)
Q Consensus 305 VDdva~aii~a~~~~~~~~~~~~iyni~s~ 334 (519)
.+|||++++.++.... .--.++++.+.+|
T Consensus 223 pedvA~~v~fL~S~~s-~~itGq~i~VDGG 251 (268)
T d2bgka1 223 AEDVADAVAYLAGDES-KYVSGLNLVIDGG 251 (268)
T ss_dssp HHHHHHHHHHHHSGGG-TTCCSCEEEESTT
T ss_pred HHHHHHHHHHHhChhh-CCccCceEEECcC
Confidence 8999999999886432 2224789999887
|
| >d2ae2a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), II [TaxId: 4076]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Tropinone reductase species: Jimsonweed (Datura stramonium), II [TaxId: 4076]
Probab=99.62 E-value=4.6e-15 Score=142.93 Aligned_cols=228 Identities=19% Similarity=0.176 Sum_probs=147.2
Q ss_pred cCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 010075 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (519)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (519)
++||+++||||++.||++++++|++.| .+|++..|++.. .+++.++ +++. ..++..
T Consensus 6 L~GK~alITGas~GIG~aia~~la~~G---a~V~~~~r~~~~---l~~~~~~---------~~~~---------g~~~~~ 61 (259)
T d2ae2a_ 6 LEGCTALVTGGSRGIGYGIVEELASLG---ASVYTCSRNQKE---LNDCLTQ---------WRSK---------GFKVEA 61 (259)
T ss_dssp CTTCEEEEESCSSHHHHHHHHHHHHTT---CEEEEEESCHHH---HHHHHHH---------HHHT---------TCEEEE
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCC---CEEEEEECCHHH---HHHHHHH---------HHhc---------CCCceE
Confidence 579999999999999999999999999 678888886322 2222211 1111 256788
Q ss_pred EeccCCCCCCCCChhhhHHHH---hc-CccEEEEcCccCCc-------cccHHHHHHHhHHHHHHHHHHHHhc---cCCc
Q 010075 90 VPGDISSEDLGLKDSNLKEEL---WN-ELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKC---VKLK 155 (519)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l---~~-~vdiViH~Aa~v~f-------~~~~~~~~~~Nv~gt~~ll~~a~~~---~~l~ 155 (519)
+.+|+++++- -....+.+ +. .+|++||+||.... .+.++..+++|+.|+..+.+.+... ++-.
T Consensus 62 ~~~Dv~~~~~---v~~~~~~~~~~~~~~idilvnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G 138 (259)
T d2ae2a_ 62 SVCDLSSRSE---RQELMNTVANHFHGKLNILVNNAGIVIYKEAKDYTVEDYSLIMSINFEAAYHLSVLAHPFLKASERG 138 (259)
T ss_dssp EECCTTCHHH---HHHHHHHHHHHTTTCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTSSE
T ss_pred EEeeCCCHHH---HHHHHHHHHHHhCCCceEEEECCceeccCccccCCHHHHHHHHhcccceeEEEEeeccchhhhhccc
Confidence 9999996321 01111111 23 59999999997643 2568889999999999988876542 3456
Q ss_pred eEEEEecceeecCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcHHHHHH
Q 010075 156 VFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTK 235 (519)
Q Consensus 156 ~~V~vSTa~v~~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~Y~~sK 235 (519)
++|++||....... +....|+.||
T Consensus 139 ~Ii~isS~~~~~~~--------------------------------------------------------~~~~~Y~asK 162 (259)
T d2ae2a_ 139 NVVFISSVSGALAV--------------------------------------------------------PYEAVYGATK 162 (259)
T ss_dssp EEEEECCGGGTSCC--------------------------------------------------------TTCHHHHHHH
T ss_pred cccccccccccccc--------------------------------------------------------ccccchHHHH
Confidence 89999997543211 2235799999
Q ss_pred HHHHHHHHHh-----hcCCcEEEEecCccccCCCCCCCcccccccccHHHHHHhhcCCceeeccCCCceeeeeeHHHHHH
Q 010075 236 TMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVN 310 (519)
Q Consensus 236 ~~aE~lv~~~-----~~~lp~~IvRPs~V~g~~~~p~~gw~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~d~vpVDdva~ 310 (519)
+..+.+.+.. ..++.+..|-||.|-.+..+.... . ......+....... + ..-+.-.+|+|+
T Consensus 163 aal~~lt~~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~---~-~~~~~~~~~~~~~~----p-----l~R~g~pedvA~ 229 (259)
T d2ae2a_ 163 GAMDQLTRCLAFEWAKDNIRVNGVGPGVIATSLVEMTIQ---D-PEQKENLNKLIDRC----A-----LRRMGEPKELAA 229 (259)
T ss_dssp HHHHHHHHHHHHHTGGGTEEEEEEEECSBCSHHHHHHTT---S-HHHHHHHHHHHHTS----T-----TCSCBCHHHHHH
T ss_pred HHHHHHHHHHHHHhCcCceEEEEeeeCcccCHHHHhhhh---c-hhhHHHHHHHHhcC----C-----CCCCcCHHHHHH
Confidence 9988888754 457999999999886543211000 0 00011111111111 1 112455789999
Q ss_pred HHHHHHHHhccCCCCCcEEEecCC
Q 010075 311 AMIVAMVAHAKQPSDANIYHVGSS 334 (519)
Q Consensus 311 aii~a~~~~~~~~~~~~iyni~s~ 334 (519)
+++.++.... .--.++++.+.+|
T Consensus 230 ~v~fL~S~~s-~~itG~~i~VDGG 252 (259)
T d2ae2a_ 230 MVAFLCFPAA-SYVTGQIIYVDGG 252 (259)
T ss_dssp HHHHHHSGGG-TTCCSCEEEESTT
T ss_pred HHHHHhCchh-CCCcCcEEEECCC
Confidence 9998886432 2224788888777
|
| >d1cyda_ c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Carbonyl reductase species: Mouse (Mus musculus) [TaxId: 10090]
Probab=99.62 E-value=8.1e-15 Score=139.69 Aligned_cols=217 Identities=17% Similarity=0.178 Sum_probs=147.4
Q ss_pred cCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 010075 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (519)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (519)
++||+++||||++.||++++++|++.| .+|++..|+... .+.+. ++ ..++.+
T Consensus 3 l~GK~alITGas~GIG~aia~~la~~G---a~V~~~~r~~~~---l~~~~-------------~~---------~~~~~~ 54 (242)
T d1cyda_ 3 FSGLRALVTGAGKGIGRDTVKALHASG---AKVVAVTRTNSD---LVSLA-------------KE---------CPGIEP 54 (242)
T ss_dssp CTTCEEEEESTTSHHHHHHHHHHHHTT---CEEEEEESCHHH---HHHHH-------------HH---------STTCEE
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCC---CEEEEEECCHHH---HHHHH-------------Hh---------cCCCeE
Confidence 579999999999999999999999999 688888886421 12221 11 146788
Q ss_pred EeccCCCCCCCCChhhhHHHHhc---CccEEEEcCccCCc-------cccHHHHHHHhHHHHHHHHHHHHh-c---cCCc
Q 010075 90 VPGDISSEDLGLKDSNLKEELWN---ELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKK-C---VKLK 155 (519)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~~---~vdiViH~Aa~v~f-------~~~~~~~~~~Nv~gt~~ll~~a~~-~---~~l~ 155 (519)
+.+|++++ +..++.++ ++|++||+||.... .+.++..+++|+.|+..+.+.+.+ + +.-.
T Consensus 55 ~~~Dv~~~-------~~v~~~~~~~g~iDilVnnAg~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~~~g 127 (242)
T d1cyda_ 55 VCVDLGDW-------DATEKALGGIGPVDLLVNNAALVIMQPFLEVTKEAFDRSFSVNLRSVFQVSQMVARDMINRGVPG 127 (242)
T ss_dssp EECCTTCH-------HHHHHHHTTCCCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCE
T ss_pred EEEeCCCH-------HHHHHHHHHcCCCeEEEECCccccchhHHHHHHHHHHHHHHHHhccchHHHHHhchhhhhhcccC
Confidence 99999953 33445544 69999999997643 256888999999999999887643 1 2346
Q ss_pred eEEEEecceeecCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcHHHHHH
Q 010075 156 VFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTK 235 (519)
Q Consensus 156 ~~V~vSTa~v~~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~Y~~sK 235 (519)
++|++||....... +....|+.||
T Consensus 128 ~ii~isS~~~~~~~--------------------------------------------------------~~~~~Y~asK 151 (242)
T d1cyda_ 128 SIVNVSSMVAHVTF--------------------------------------------------------PNLITYSSTK 151 (242)
T ss_dssp EEEEECCGGGTSCC--------------------------------------------------------TTBHHHHHHH
T ss_pred cccccchhhccccC--------------------------------------------------------CccccccchH
Confidence 89999997543211 1235799999
Q ss_pred HHHHHHHHHh-----hcCCcEEEEecCccccCCCCCCCcccccccccHHHHHHhhcCCceeeccCCCceeeeeeHHHHHH
Q 010075 236 TMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVN 310 (519)
Q Consensus 236 ~~aE~lv~~~-----~~~lp~~IvRPs~V~g~~~~p~~gw~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~d~vpVDdva~ 310 (519)
+..+.+.+.. ..++.+..+-||.|-.+..+.. .............. + ..-+...+|+|+
T Consensus 152 aal~~lt~~lA~e~~~~gIrvN~I~PG~i~T~~~~~~-------~~~~~~~~~~~~~~----p-----l~R~~~peeva~ 215 (242)
T d1cyda_ 152 GAMTMLTKAMAMELGPHKIRVNSVNPTVVLTDMGKKV-------SADPEFARKLKERH----P-----LRKFAEVEDVVN 215 (242)
T ss_dssp HHHHHHHHHHHHHHGGGTEEEEEEEECCBTTHHHHHH-------TCCHHHHHHHHHHS----T-----TSSCBCHHHHHH
T ss_pred HHHHHHHHHHHHHhCccCeecccCCCCCccCHHHHhh-------cCCHHHHHHHHhcC----C-----CCCCcCHHHHHH
Confidence 9999888754 4579999999998865432111 11111222111111 1 112456789999
Q ss_pred HHHHHHHHhccCCCCCcEEEecCC
Q 010075 311 AMIVAMVAHAKQPSDANIYHVGSS 334 (519)
Q Consensus 311 aii~a~~~~~~~~~~~~iyni~s~ 334 (519)
+++.++.... .--.++++.+.+|
T Consensus 216 ~v~fL~S~~s-~~itG~~i~vDGG 238 (242)
T d1cyda_ 216 SILFLLSDRS-ASTSGGGILVDAG 238 (242)
T ss_dssp HHHHHHSGGG-TTCCSSEEEESTT
T ss_pred HHHHHhCchh-cCcCCceEEeCcc
Confidence 9998885432 2224788888776
|
| >d2c07a1 c.2.1.2 (A:54-304) beta-keto acyl carrier protein reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]
Probab=99.62 E-value=7.9e-15 Score=140.55 Aligned_cols=219 Identities=14% Similarity=0.144 Sum_probs=147.5
Q ss_pred cCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 010075 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (519)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (519)
+.||+++||||++.||+++++.|++.| .+|++..|+... .+.+.+++ ++ ...++..
T Consensus 8 lenKvalITGas~GIG~a~a~~la~~G---a~V~~~~r~~~~---l~~~~~~l---------~~---------~g~~~~~ 63 (251)
T d2c07a1 8 GENKVALVTGAGRGIGREIAKMLAKSV---SHVICISRTQKS---CDSVVDEI---------KS---------FGYESSG 63 (251)
T ss_dssp CSSCEEEEESTTSHHHHHHHHHHTTTS---SEEEEEESSHHH---HHHHHHHH---------HT---------TTCCEEE
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHcC---CEEEEEECCHHH---HHHHHHHH---------Hh---------cCCcEEE
Confidence 468999999999999999999999998 678888886422 22222111 11 1257889
Q ss_pred EeccCCCCCCCCChhhhHHHH-------hcCccEEEEcCccCCc-------cccHHHHHHHhHHHHHHHHHHHHhc---c
Q 010075 90 VPGDISSEDLGLKDSNLKEEL-------WNELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKC---V 152 (519)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l-------~~~vdiViH~Aa~v~f-------~~~~~~~~~~Nv~gt~~ll~~a~~~---~ 152 (519)
+.+|++++ +..+.+ ..++|++||+|+.... .+.++..+++|+.|+..+.+.+... +
T Consensus 64 ~~~Dvt~~-------~~v~~~~~~~~~~~g~iDilvnnag~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~ 136 (251)
T d2c07a1 64 YAGDVSKK-------EEISEVINKILTEHKNVDILVNNAGITRDNLFLRMKNDEWEDVLRTNLNSLFYITQPISKRMINN 136 (251)
T ss_dssp EECCTTCH-------HHHHHHHHHHHHHCSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHH
T ss_pred EEccCCCH-------HHHHHHHHHHHHhcCCceeeeeccccccccccccccHHHHhhhheeeehhhhhhhhhcCcccccC
Confidence 99999963 222233 2479999999998642 2678899999999999888866432 3
Q ss_pred CCceEEEEecceeecCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcHHH
Q 010075 153 KLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYV 232 (519)
Q Consensus 153 ~l~~~V~vSTa~v~~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~Y~ 232 (519)
+-.++|++||....... .....|+
T Consensus 137 ~~G~IVnisS~~~~~~~--------------------------------------------------------~~~~~Y~ 160 (251)
T d2c07a1 137 RYGRIINISSIVGLTGN--------------------------------------------------------VGQANYS 160 (251)
T ss_dssp TCEEEEEECCTHHHHCC--------------------------------------------------------TTCHHHH
T ss_pred CCeEEEEECCHHhcCCC--------------------------------------------------------CCCHHHH
Confidence 55799999997653211 1234799
Q ss_pred HHHHHHHHHHHHh-----hcCCcEEEEecCccccCCCCCCCcccccccccHHHHHHhhcCCceeeccCCCceeeeeeHHH
Q 010075 233 FTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDM 307 (519)
Q Consensus 233 ~sK~~aE~lv~~~-----~~~lp~~IvRPs~V~g~~~~p~~gw~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~d~vpVDd 307 (519)
.||+..+.+.+.. ..++.+..|-||.|-.+..+.. .......+.... + ..-+...+|
T Consensus 161 asKaal~~ltr~lA~el~~~gIrVN~V~PG~v~T~~~~~~---------~~~~~~~~~~~~----p-----l~R~~~ped 222 (251)
T d2c07a1 161 SSKAGVIGFTKSLAKELASRNITVNAIAPGFISSDMTDKI---------SEQIKKNIISNI----P-----AGRMGTPEE 222 (251)
T ss_dssp HHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCC-----C---------CHHHHHHHHTTC----T-----TSSCBCHHH
T ss_pred HHHHHHHHHHHHHHHHhhhhCeEEEEEccCCEeccccccc---------CHHHHHHHHhcC----C-----CCCCcCHHH
Confidence 9999999888754 5579999999999876543211 112222222211 1 112456789
Q ss_pred HHHHHHHHHHHhccCCCCCcEEEecCC
Q 010075 308 VVNAMIVAMVAHAKQPSDANIYHVGSS 334 (519)
Q Consensus 308 va~aii~a~~~~~~~~~~~~iyni~s~ 334 (519)
+|++++.++.... .--.+++..+.+|
T Consensus 223 vA~~v~fL~S~~s-~~itG~~i~vDGG 248 (251)
T d2c07a1 223 VANLACFLSSDKS-GYINGRVFVIDGG 248 (251)
T ss_dssp HHHHHHHHHSGGG-TTCCSCEEEESTT
T ss_pred HHHHHHHHhCchh-CCCcCcEEEECCC
Confidence 9999988886432 2224678888776
|
| >d1k2wa_ c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter sphaeroides [TaxId: 1063]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Sorbitol dehydrogenase species: Rhodobacter sphaeroides [TaxId: 1063]
Probab=99.62 E-value=1.8e-15 Score=145.61 Aligned_cols=226 Identities=18% Similarity=0.218 Sum_probs=146.5
Q ss_pred cCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 010075 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (519)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (519)
++||+++||||++.||+++++.|++.| .+|++..|+.. ..+.+. ++. ..++..
T Consensus 3 L~gK~alVTGas~GIG~aia~~la~~G---a~V~~~~r~~~---~l~~~~-------------~~~--------~~~~~~ 55 (256)
T d1k2wa_ 3 LDGKTALITGSARGIGRAFAEAYVREG---ARVAIADINLE---AARATA-------------AEI--------GPAACA 55 (256)
T ss_dssp TTTEEEEEETCSSHHHHHHHHHHHHTT---EEEEEEESCHH---HHHHHH-------------HHH--------CTTEEE
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCC---CEEEEEECCHH---HHHHHH-------------HHh--------CCceEE
Confidence 579999999999999999999999999 68888888632 122222 121 357889
Q ss_pred EeccCCCCCCCCChhhhHHHH-------hcCccEEEEcCccCCc-------cccHHHHHHHhHHHHHHHHHHHHh-c---
Q 010075 90 VPGDISSEDLGLKDSNLKEEL-------WNELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKK-C--- 151 (519)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l-------~~~vdiViH~Aa~v~f-------~~~~~~~~~~Nv~gt~~ll~~a~~-~--- 151 (519)
+.+|++++ +..+.+ ..++|++||+||.... .+.++..+++|+.|+..+.+.+.. +
T Consensus 56 ~~~Dvt~~-------~~v~~~~~~~~~~~g~iDilVnnAg~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~~~~~ 128 (256)
T d1k2wa_ 56 IALDVTDQ-------ASIDRCVAELLDRWGSIDILVNNAALFDLAPIVEITRESYDRLFAINVSGTLFMMQAVARAMIAG 128 (256)
T ss_dssp EECCTTCH-------HHHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH
T ss_pred EEeeCCCH-------HHHHHHHHHHHHHhCCccEEEeecccccccccccCCHHHHHhhhceeeeccccchhhccchhHHh
Confidence 99999963 222333 2479999999997643 267888999999999998876432 2
Q ss_pred cCCceEEEEecceeecCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcHH
Q 010075 152 VKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTY 231 (519)
Q Consensus 152 ~~l~~~V~vSTa~v~~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~Y 231 (519)
++-.++|++||....... .....|
T Consensus 129 ~~~g~Iv~isS~~~~~~~--------------------------------------------------------~~~~~Y 152 (256)
T d1k2wa_ 129 GRGGKIINMASQAGRRGE--------------------------------------------------------ALVGVY 152 (256)
T ss_dssp TSCEEEEEECCGGGTSCC--------------------------------------------------------TTCHHH
T ss_pred ccCCccccccchhhcccc--------------------------------------------------------ccccch
Confidence 234689999997543211 223579
Q ss_pred HHHHHHHHHHHHHh-----hcCCcEEEEecCccccCCCCCCC-ccccccccc-HHHHHHhhcCCceeeccCCCceeeeee
Q 010075 232 VFTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFP-GWVEDLKTI-NTLFVASAQGNLRCLVGETKVIMDVIP 304 (519)
Q Consensus 232 ~~sK~~aE~lv~~~-----~~~lp~~IvRPs~V~g~~~~p~~-gw~~~~~~~-~~~i~~~~~g~~~~~~~~~~~~~d~vp 304 (519)
+.||+..+.+.+.. ..++.+..|-||.|-.+..+... .+.+..... .......... . ...-+..
T Consensus 153 ~asKaal~~lt~~lA~el~~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~-----PlgR~~~ 223 (256)
T d1k2wa_ 153 CATKAAVISLTQSAGLNLIRHGINVNAIAPGVVDGEHWDGVDAKFADYENLPRGEKKRQVGAA----V-----PFGRMGR 223 (256)
T ss_dssp HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCTTHHHHHHHHHHHHTCCTTHHHHHHHHH----S-----TTSSCBC
T ss_pred hhhhhHHHHHHHHHHHHhcccCeEEEEEecCCCCchhhhhhhhhhhhhccCChHHHHHHHHhc----C-----CCCCCcC
Confidence 99999998888754 55799999999988765321100 000000000 0000111000 0 1112455
Q ss_pred HHHHHHHHHHHHHHhccCCCCCcEEEecCCC
Q 010075 305 VDMVVNAMIVAMVAHAKQPSDANIYHVGSSL 335 (519)
Q Consensus 305 VDdva~aii~a~~~~~~~~~~~~iyni~s~~ 335 (519)
.+|+|++++.++.... .--.+++..+.+|.
T Consensus 224 p~evA~~v~fL~S~~a-~~iTG~~i~vDGG~ 253 (256)
T d1k2wa_ 224 AEDLTGMAIFLATPEA-DYIVAQTYNVDGGN 253 (256)
T ss_dssp HHHHHHHHHHTTSGGG-TTCCSCEEEESTTS
T ss_pred HHHHHHHHHHHhCchh-CCccCceEEECcch
Confidence 7899999998775332 22247788887773
|
| >d1ydea1 c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase 3 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Retinal dehydrogenase/reductase 3 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.61 E-value=5e-15 Score=141.85 Aligned_cols=222 Identities=14% Similarity=0.105 Sum_probs=146.3
Q ss_pred hcCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceE
Q 010075 9 FLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKIT 88 (519)
Q Consensus 9 ~~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~ 88 (519)
-++||+++||||++.||+++++.|++.| .+|++..|+.. ..+.+. ++ ..++.
T Consensus 3 rl~GK~alITGas~GIG~aia~~la~~G---a~V~i~~r~~~---~~~~~~-------------~~---------~~~~~ 54 (250)
T d1ydea1 3 RYAGKVVVVTGGGRGIGAGIVRAFVNSG---ARVVICDKDES---GGRALE-------------QE---------LPGAV 54 (250)
T ss_dssp TTTTCEEEEETCSSHHHHHHHHHHHHTT---CEEEEEESCHH---HHHHHH-------------HH---------CTTEE
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHCC---CEEEEEECCHH---HHHHHH-------------Hh---------cCCCe
Confidence 3689999999999999999999999999 67888888632 122222 22 14578
Q ss_pred EEeccCCCCCCCCChhhhHHHH-------hcCccEEEEcCccCC----c----cccHHHHHHHhHHHHHHHHHHHHhc--
Q 010075 89 FVPGDISSEDLGLKDSNLKEEL-------WNELDIMVNSAAITK----F----DERYDVAFGINTLGVIHLVNFAKKC-- 151 (519)
Q Consensus 89 ~v~gDl~~~~lgls~~~~~~~l-------~~~vdiViH~Aa~v~----f----~~~~~~~~~~Nv~gt~~ll~~a~~~-- 151 (519)
++.+|++++ +..+.+ ..++|++||+||... + .+.++..+++|+.|+..+.+.+.+.
T Consensus 55 ~~~~Dvs~~-------~~v~~~~~~~~~~~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~p~m~ 127 (250)
T d1ydea1 55 FILCDVTQE-------DDVKTLVSETIRRFGRLDCVVNNAGHHPPPQRPEETSAQGFRQLLELNLLGTYTLTKLALPYLR 127 (250)
T ss_dssp EEECCTTSH-------HHHHHHHHHHHHHHSCCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHH
T ss_pred EEEccCCCH-------HHHHHHHHHHHHhcCCCCEEEecccccccccccccccHHHHHHHHHHhhhhHHHHHHHhhHHHH
Confidence 899999963 222333 246999999999642 2 1458888999999999888876532
Q ss_pred cCCceEEEEecceeecCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcHH
Q 010075 152 VKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTY 231 (519)
Q Consensus 152 ~~l~~~V~vSTa~v~~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~Y 231 (519)
++-.++|++||....... .....|
T Consensus 128 ~~~G~Ii~isS~~~~~~~--------------------------------------------------------~~~~~Y 151 (250)
T d1ydea1 128 KSQGNVINISSLVGAIGQ--------------------------------------------------------AQAVPY 151 (250)
T ss_dssp HHTCEEEEECCHHHHHCC--------------------------------------------------------TTCHHH
T ss_pred hCCCCCcccccccccccc--------------------------------------------------------cCcchh
Confidence 122589999998653211 123579
Q ss_pred HHHHHHHHHHHHHh-----hcCCcEEEEecCccccCCCCCCCcccccccccHHHHHHhhcCCceeeccCCCceeeeeeHH
Q 010075 232 VFTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVD 306 (519)
Q Consensus 232 ~~sK~~aE~lv~~~-----~~~lp~~IvRPs~V~g~~~~p~~gw~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~d~vpVD 306 (519)
+.||+..+.+.+.. ..++.+..|-||.|-.+..+...+ ........+....... ...-+...+
T Consensus 152 ~asKaal~~lt~~lA~e~a~~gIrVN~I~PG~i~T~~~~~~~~---~~~~~~~~~~~~~~~~---------pl~R~g~p~ 219 (250)
T d1ydea1 152 VATKGAVTAMTKALALDESPYGVRVNCISPGNIWTPLWEELAA---LMPDPRASIREGMLAQ---------PLGRMGQPA 219 (250)
T ss_dssp HHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCHHHHHHHT---TSSSHHHHHHHHHHTS---------TTSSCBCHH
T ss_pred HHHHhhHHHHHHHHHHHhcccCeEEEEEeeCCCCChhHHHHhh---cCCCHHHHHHHHHhcC---------CCCCCCCHH
Confidence 99999988887754 557999999999885532110000 0001111222211111 112246678
Q ss_pred HHHHHHHHHHHHhccCCCCCcEEEecCCC
Q 010075 307 MVVNAMIVAMVAHAKQPSDANIYHVGSSL 335 (519)
Q Consensus 307 dva~aii~a~~~~~~~~~~~~iyni~s~~ 335 (519)
|+|++++.++.. . .--.++++.+.+|.
T Consensus 220 eva~~v~fL~Sd-a-~~itG~~i~vDGG~ 246 (250)
T d1ydea1 220 EVGAAAVFLASE-A-NFCTGIELLVTGGA 246 (250)
T ss_dssp HHHHHHHHHHHH-C-TTCCSCEEEESTTT
T ss_pred HHHHHHHHHhCc-c-CCCcCCeEEECCCc
Confidence 999999988753 2 22247888887773
|
| >d1xq1a_ c.2.1.2 (A:) Tropinone reductase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Tropinone reductase species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=99.61 E-value=9.4e-15 Score=140.67 Aligned_cols=224 Identities=16% Similarity=0.126 Sum_probs=136.2
Q ss_pred cCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 010075 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (519)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (519)
++||+++||||++.||++++++|++.| .+|++..|+... .+++.++ +.+. ..++..
T Consensus 6 LkgK~alVTGas~GIG~aiA~~la~~G---a~V~~~~r~~~~---l~~~~~~---------~~~~---------~~~~~~ 61 (259)
T d1xq1a_ 6 LKAKTVLVTGGTKGIGHAIVEEFAGFG---AVIHTCARNEYE---LNECLSK---------WQKK---------GFQVTG 61 (259)
T ss_dssp CTTCEEEETTTTSHHHHHHHHHHHHTT---CEEEEEESCHHH---HHHHHHH---------HHHT---------TCCEEE
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCC---CEEEEEECCHHH---HHHHHHH---------HHhc---------CCceEE
Confidence 589999999999999999999999999 678888886422 1222111 1111 257899
Q ss_pred EeccCCCCCCCCChhhhHHH---Hh-cCccEEEEcCccCCc-------cccHHHHHHHhHHHHHHHHHHHHhc---cCCc
Q 010075 90 VPGDISSEDLGLKDSNLKEE---LW-NELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKC---VKLK 155 (519)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~---l~-~~vdiViH~Aa~v~f-------~~~~~~~~~~Nv~gt~~ll~~a~~~---~~l~ 155 (519)
+.+|+++++- -....+. .. ..+|++||+||.... .+.++..+++|+.|+..+.+.+.+. ++-.
T Consensus 62 ~~~Dv~~~~~---v~~~~~~~~~~~~g~idilvnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G 138 (259)
T d1xq1a_ 62 SVCDASLRPE---REKLMQTVSSMFGGKLDILINNLGAIRSKPTLDYTAEDFSFHISTNLESAYHLSQLAHPLLKASGCG 138 (259)
T ss_dssp EECCTTSHHH---HHHHHHHHHHHHTTCCSEEEEECCC------CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSC
T ss_pred EeccCCCHHH---HHHHHHHHHHHhCCCcccccccccccCCCchhhCCHHHHHHHHHHHhhhheeeehhhhhcccccccc
Confidence 9999996321 0111111 12 359999999998642 2678899999999999988876542 2456
Q ss_pred eEEEEecceeecCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcHHHHHH
Q 010075 156 VFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTK 235 (519)
Q Consensus 156 ~~V~vSTa~v~~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~Y~~sK 235 (519)
++|++||....... .....|+.||
T Consensus 139 ~Iv~isS~~~~~~~--------------------------------------------------------~~~~~Y~asK 162 (259)
T d1xq1a_ 139 NIIFMSSIAGVVSA--------------------------------------------------------SVGSIYSATK 162 (259)
T ss_dssp EEEEEC------------------------------------------------------------------CCHHHHHH
T ss_pred cccccccccccccc--------------------------------------------------------cccccccccc
Confidence 89999997643211 1235799999
Q ss_pred HHHHHHHHHh-----hcCCcEEEEecCccccCCCCCCCcccccccccHHHHHHhhcCCceeeccCCCceeeeeeHHHHHH
Q 010075 236 TMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVN 310 (519)
Q Consensus 236 ~~aE~lv~~~-----~~~lp~~IvRPs~V~g~~~~p~~gw~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~d~vpVDdva~ 310 (519)
+..+.+.+.. ..++.+..|-||.|-.+..+... .+ ...... .......-+.-.+|||+
T Consensus 163 aal~~lt~~lA~e~~~~gIrVN~V~PG~i~T~~~~~~~--~~------~~~~~~---------~~~~pl~R~~~pedvA~ 225 (259)
T d1xq1a_ 163 GALNQLARNLACEWASDGIRANAVAPAVIATPLAEAVY--DD------EFKKVV---------ISRKPLGRFGEPEEVSS 225 (259)
T ss_dssp HHHHHHHHHHHHHHGGGTCEEEEEECCSCC------------------------------------------CCGGGGHH
T ss_pred cchhhhhHHHHHHhcccCeEEEEeccCcccCHHhhhhc--hH------HHHHHH---------HhCCCCCCCcCHHHHHH
Confidence 9998887754 56799999999998665332110 00 000000 00001112345679999
Q ss_pred HHHHHHHHhccCCCCCcEEEecCC
Q 010075 311 AMIVAMVAHAKQPSDANIYHVGSS 334 (519)
Q Consensus 311 aii~a~~~~~~~~~~~~iyni~s~ 334 (519)
+++.++.... .--.+++.++.+|
T Consensus 226 ~v~fL~S~~s-~~iTG~~i~vDGG 248 (259)
T d1xq1a_ 226 LVAFLCMPAA-SYITGQTICVDGG 248 (259)
T ss_dssp HHHHHTSGGG-TTCCSCEEECCCC
T ss_pred HHHHHhCchh-cCCcCcEEEeCCC
Confidence 9988875332 2223678888776
|
| >d1iy8a_ c.2.1.2 (A:) Levodione reductase {Corynebacterium aquaticum [TaxId: 144185]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Levodione reductase species: Corynebacterium aquaticum [TaxId: 144185]
Probab=99.61 E-value=3.8e-15 Score=143.41 Aligned_cols=231 Identities=14% Similarity=0.087 Sum_probs=149.5
Q ss_pred cCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 010075 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (519)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (519)
++||+++||||++.||+++++.|++.| .+|++..|+... .+...++ +.+..+ ..++..
T Consensus 2 l~gK~alITGas~GIG~aia~~la~~G---a~V~i~~r~~~~---l~~~~~~---------~~~~~~-------~~~~~~ 59 (258)
T d1iy8a_ 2 FTDRVVLITGGGSGLGRATAVRLAAEG---AKLSLVDVSSEG---LEASKAA---------VLETAP-------DAEVLT 59 (258)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTT---CEEEEEESCHHH---HHHHHHH---------HHHHCT-------TCCEEE
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCC---CEEEEEECCHHH---HHHHHHH---------HHhhCC-------CCeEEE
Confidence 689999999999999999999999999 688998886432 1222211 111111 257889
Q ss_pred EeccCCCCCCCCChhhhHHHH-------hcCccEEEEcCccCC----c----cccHHHHHHHhHHHHHHHHHHHHhc---
Q 010075 90 VPGDISSEDLGLKDSNLKEEL-------WNELDIMVNSAAITK----F----DERYDVAFGINTLGVIHLVNFAKKC--- 151 (519)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l-------~~~vdiViH~Aa~v~----f----~~~~~~~~~~Nv~gt~~ll~~a~~~--- 151 (519)
+.+|++++ +..+.+ ..++|++||+||... + .+.++..+++|+.|+..+.+.+...
T Consensus 60 ~~~Dvt~~-------~~v~~~~~~~~~~~G~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~ 132 (258)
T d1iy8a_ 60 TVADVSDE-------AQVEAYVTATTERFGRIDGFFNNAGIEGKQNPTESFTAAEFDKVVSINLRGVFLGLEKVLKIMRE 132 (258)
T ss_dssp EECCTTSH-------HHHHHHHHHHHHHHSCCSEEEECCCCCCCCBCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHH
T ss_pred EeccCCCH-------HHHHHHHHHHHHHhCCCCEEEECCcccccCCchhhhhhhHHHHHhhhhccchhhhhhhhHhhhhh
Confidence 99999963 222233 357999999999642 2 2568889999999999998876432
Q ss_pred cCCceEEEEecceeecCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcHH
Q 010075 152 VKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTY 231 (519)
Q Consensus 152 ~~l~~~V~vSTa~v~~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~Y 231 (519)
++-.++|++||....... +....|
T Consensus 133 ~~~G~Ii~isS~~~~~~~--------------------------------------------------------~~~~~Y 156 (258)
T d1iy8a_ 133 QGSGMVVNTASVGGIRGI--------------------------------------------------------GNQSGY 156 (258)
T ss_dssp HTCCEEEEECCGGGTSBC--------------------------------------------------------SSBHHH
T ss_pred hcCCCCcccccHhhccCC--------------------------------------------------------CCchHH
Confidence 355689999997643211 123579
Q ss_pred HHHHHHHHHHHHHh-----hcCCcEEEEecCccccCCCCCCCcccccccccHHHHHHhhcCCceeeccCCCceeeeeeHH
Q 010075 232 VFTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVD 306 (519)
Q Consensus 232 ~~sK~~aE~lv~~~-----~~~lp~~IvRPs~V~g~~~~p~~gw~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~d~vpVD 306 (519)
+.||+..+.+.+.. ..++.+..+-||.|..+..+........ .............. ...-+.-.+
T Consensus 157 ~asKaal~~lt~~lA~el~~~gIrVN~i~PG~v~T~~~~~~~~~~~~-~~~~~~~~~~~~~~---------pl~R~~~p~ 226 (258)
T d1iy8a_ 157 AAAKHGVVGLTRNSAVEYGRYGIRINAIAPGAIWTPMVENSMKQLDP-ENPRKAAEEFIQVN---------PSKRYGEAP 226 (258)
T ss_dssp HHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSHHHHHHHHHHCT-TCHHHHHHHHHTTC---------TTCSCBCHH
T ss_pred HHHHHHHHHHHHHHHHHhCccCceEEEEeeCcccCHHHHHHHhhcCc-ccHHHHHHHHHhcC---------CCCCCcCHH
Confidence 99999988887754 4579999999999865422100000000 00111111111111 111245678
Q ss_pred HHHHHHHHHHHHhccCCCCCcEEEecCCCC
Q 010075 307 MVVNAMIVAMVAHAKQPSDANIYHVGSSLR 336 (519)
Q Consensus 307 dva~aii~a~~~~~~~~~~~~iyni~s~~~ 336 (519)
|+|++++.++.... .--.+++..+.+|..
T Consensus 227 dvA~~v~fL~S~~s-~~itG~~i~VDGG~s 255 (258)
T d1iy8a_ 227 EIAAVVAFLLSDDA-SYVNATVVPIDGGQS 255 (258)
T ss_dssp HHHHHHHHHTSGGG-TTCCSCEEEESTTTT
T ss_pred HHHHHHHHHhCchh-cCCcCceEEcCcchh
Confidence 99999998886432 222478888888743
|
| >d1yxma1 c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA reductase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Peroxisomal trans 2-enoyl CoA reductase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.61 E-value=7.5e-15 Score=144.17 Aligned_cols=235 Identities=10% Similarity=0.101 Sum_probs=148.3
Q ss_pred hhcCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCce
Q 010075 8 EFLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKI 87 (519)
Q Consensus 8 ~~~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v 87 (519)
..++||+++||||++.||+++++.|++.| .+|++..|+.... +... +.++++.+ .....++
T Consensus 8 g~L~gKvalITGas~GIG~aia~~la~~G---a~Vvi~~r~~~~l---~~~~---------~el~~~~~----~~~~~~~ 68 (297)
T d1yxma1 8 GLLQGQVAIVTGGATGIGKAIVKELLELG---SNVVIASRKLERL---KSAA---------DELQANLP----PTKQARV 68 (297)
T ss_dssp TTTTTCEEEEETTTSHHHHHHHHHHHHTT---CEEEEEESCHHHH---HHHH---------HHHHHTSC----TTCCCCE
T ss_pred CCCCCCEEEEeCCCCHHHHHHHHHHHHCC---CEEEEEECCHHHH---HHHH---------HHHHhhhc----cccCceE
Confidence 45799999999999999999999999999 6789988864321 1111 12222221 1123578
Q ss_pred EEEeccCCCCCCCCChhhhHHHHhcCccEEEEcCccCCc-------cccHHHHHHHhHHHHHHHHHHHHhc---cCCceE
Q 010075 88 TFVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKC---VKLKVF 157 (519)
Q Consensus 88 ~~v~gDl~~~~lgls~~~~~~~l~~~vdiViH~Aa~v~f-------~~~~~~~~~~Nv~gt~~ll~~a~~~---~~l~~~ 157 (519)
..+.+|+++++---.-.+...+...++|++||+|+.... .+.++..+++|+.|+..+.+.+.+. ++-..+
T Consensus 69 ~~~~~Dvs~~~~v~~~~~~~~~~~G~iDiLVnnAg~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~~~m~~~~~g~I 148 (297)
T d1yxma1 69 IPIQCNIRNEEEVNNLVKSTLDTFGKINFLVNNGGGQFLSPAEHISSKGWHAVLETNLTGTFYMCKAVYSSWMKEHGGSI 148 (297)
T ss_dssp EEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHHHCEEE
T ss_pred EEEeccCCCHHHHHHHHHHHHHHhCCeEEEEeeccccccCchhhhhhhhhhhhhcccccchhhHHHHHHHhhcccccccc
Confidence 999999996421000000111123479999999997542 2678889999999999998877532 234567
Q ss_pred EEEecceeecCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcHHHHHHHH
Q 010075 158 VHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTM 237 (519)
Q Consensus 158 V~vSTa~v~~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~Y~~sK~~ 237 (519)
|.+|++...+. +....|+.||+.
T Consensus 149 i~~ss~~~~~~---------------------------------------------------------~~~~~Y~asKaa 171 (297)
T d1yxma1 149 VNIIVPTKAGF---------------------------------------------------------PLAVHSGAARAG 171 (297)
T ss_dssp EEECCCCTTCC---------------------------------------------------------TTCHHHHHHHHH
T ss_pred ccccccccccc---------------------------------------------------------cccccchhHHHH
Confidence 77776432110 224579999999
Q ss_pred HHHHHHHh-----hcCCcEEEEecCccccCCCCCCC-cccccccccHHHHHHhhcCCceeeccCCCceeeeeeHHHHHHH
Q 010075 238 GEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFP-GWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNA 311 (519)
Q Consensus 238 aE~lv~~~-----~~~lp~~IvRPs~V~g~~~~p~~-gw~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~d~vpVDdva~a 311 (519)
.+.+.+.. ..++.+..|-||.|..+...... .+.+ .. ........+ ..-+...+|+|++
T Consensus 172 l~~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~------~~----~~~~~~~~p-----lgR~g~pedvA~~ 236 (297)
T d1yxma1 172 VYNLTKSLALEWACSGIRINCVAPGVIYSQTAVENYGSWGQ------SF----FEGSFQKIP-----AKRIGVPEEVSSV 236 (297)
T ss_dssp HHHHHHHHHHHTGGGTEEEEEEEECSBCCTGGGTTSGGGGG------GG----GTTGGGGST-----TSSCBCTHHHHHH
T ss_pred HHHHHHHHHHHhcccCceEEEeeeCcCcCcchhhhccccCH------HH----HHHHHhcCC-----CCCCcCHHHHHHH
Confidence 88888754 45799999999998765321111 1100 00 111111111 1124457899999
Q ss_pred HHHHHHHhccCCCCCcEEEecCC
Q 010075 312 MIVAMVAHAKQPSDANIYHVGSS 334 (519)
Q Consensus 312 ii~a~~~~~~~~~~~~iyni~s~ 334 (519)
++.++.... .--.+++..+.+|
T Consensus 237 v~fL~Sd~s-~~iTG~~i~VDGG 258 (297)
T d1yxma1 237 VCFLLSPAA-SFITGQSVDVDGG 258 (297)
T ss_dssp HHHHHSGGG-TTCCSCEEEESTT
T ss_pred HHHHhCchh-cCcCCcEEEeCcC
Confidence 999886432 2224788888877
|
| >d1ae1a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), I [TaxId: 4076]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Tropinone reductase species: Jimsonweed (Datura stramonium), I [TaxId: 4076]
Probab=99.60 E-value=1.2e-14 Score=139.71 Aligned_cols=232 Identities=15% Similarity=0.118 Sum_probs=147.5
Q ss_pred cCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 010075 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (519)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (519)
++||+|||||||+.||++++++|++.| .+|++..|+... .+...++ +++. ...+.+
T Consensus 4 L~gK~alITGas~GIG~aia~~la~~G---~~V~i~~r~~~~---l~~~~~~---------~~~~---------~~~~~~ 59 (258)
T d1ae1a_ 4 LKGTTALVTGGSKGIGYAIVEELAGLG---ARVYTCSRNEKE---LDECLEI---------WREK---------GLNVEG 59 (258)
T ss_dssp CTTCEEEEESCSSHHHHHHHHHHHHTT---CEEEEEESCHHH---HHHHHHH---------HHHT---------TCCEEE
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCC---CEEEEEECCHHH---HHHHHHH---------HHhc---------CCCceE
Confidence 689999999999999999999999999 678999887422 1111111 1111 356788
Q ss_pred EeccCCCCCCCCChhhhHHHHh-cCccEEEEcCccCCc-------cccHHHHHHHhHHHHHHHHHHHHhc---cCCceEE
Q 010075 90 VPGDISSEDLGLKDSNLKEELW-NELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKC---VKLKVFV 158 (519)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~-~~vdiViH~Aa~v~f-------~~~~~~~~~~Nv~gt~~ll~~a~~~---~~l~~~V 158 (519)
+.+|+++++--..-.+...+.. ..+|+++|+|+.... .+.++..+++|+.++..+.+++... ++..++|
T Consensus 60 ~~~D~s~~~~~~~~~~~~~~~~~g~idilinnag~~~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~m~~~~~g~ii 139 (258)
T d1ae1a_ 60 SVCDLLSRTERDKLMQTVAHVFDGKLNILVNNAGVVIHKEAKDFTEKDYNIIMGTNFEAAYHLSQIAYPLLKASQNGNVI 139 (258)
T ss_dssp EECCTTCHHHHHHHHHHHHHHTTSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSEEEE
T ss_pred EEeecCCHHHHHHHHHHHHHHhCCCcEEEeccccccccCccccCCHHHHhhhhhhccccccccccccccccccccccccc
Confidence 9999996321000000111222 248999999998642 2678899999999999988876532 3567999
Q ss_pred EEecceeecCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcHHHHHHHHH
Q 010075 159 HVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMG 238 (519)
Q Consensus 159 ~vSTa~v~~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~Y~~sK~~a 238 (519)
++||....... +....|+.+|+..
T Consensus 140 ~isS~~~~~~~--------------------------------------------------------~~~~~Y~~sK~al 163 (258)
T d1ae1a_ 140 FLSSIAGFSAL--------------------------------------------------------PSVSLYSASKGAI 163 (258)
T ss_dssp EECCGGGTSCC--------------------------------------------------------TTCHHHHHHHHHH
T ss_pred ccccccccccc--------------------------------------------------------ccchhHHHHHHHH
Confidence 99998654211 2245799999999
Q ss_pred HHHHHHh-----hcCCcEEEEecCccccCCCCCCCcccccccccHHHHHHhhcCCceeeccCCCceeeeeeHHHHHHHHH
Q 010075 239 EMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMI 313 (519)
Q Consensus 239 E~lv~~~-----~~~lp~~IvRPs~V~g~~~~p~~gw~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~d~vpVDdva~aii 313 (519)
+.+.+.. ..++.+..+.||.|..+..+.. ..........+..+.... ...-+...+|+|++++
T Consensus 164 ~~lt~~lA~el~~~gIrvN~I~PG~i~T~~~~~~---~~~~~~~~~~~~~~~~~~---------plgR~~~pediA~~v~ 231 (258)
T d1ae1a_ 164 NQMTKSLACEWAKDNIRVNSVAPGVILTPLVETA---IKKNPHQKEEIDNFIVKT---------PMGRAGKPQEVSALIA 231 (258)
T ss_dssp HHHHHHHHHHHGGGTEEEEEEEECSBC----------------CHHHHHHHHHHS---------TTCSCBCHHHHHHHHH
T ss_pred HHHHHHHHHhcCcCcEEEEEEeeCcccCcchhhh---hhhhhhhHHHHHHHHhcC---------CCCCCcCHHHHHHHHH
Confidence 9888755 4579999999999977543211 111111222222222111 1112578899999999
Q ss_pred HHHHHhccCCCCCcEEEecCC
Q 010075 314 VAMVAHAKQPSDANIYHVGSS 334 (519)
Q Consensus 314 ~a~~~~~~~~~~~~iyni~s~ 334 (519)
.++.... .--.++.+.+.+|
T Consensus 232 fL~S~~s-~~itG~~i~vDGG 251 (258)
T d1ae1a_ 232 FLCFPAA-SYITGQIIWADGG 251 (258)
T ss_dssp HHHSGGG-TTCCSCEEEESTT
T ss_pred HHhChhh-CCCcCcEEEeCCC
Confidence 9885333 2223677888776
|
| >d1zk4a1 c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase {Lactobacillus brevis [TaxId: 1580]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: R-specific alcohol dehydrogenase species: Lactobacillus brevis [TaxId: 1580]
Probab=99.60 E-value=1.1e-14 Score=139.67 Aligned_cols=227 Identities=14% Similarity=0.150 Sum_probs=146.1
Q ss_pred hcCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceE
Q 010075 9 FLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKIT 88 (519)
Q Consensus 9 ~~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~ 88 (519)
-++||+++||||++.||++++++|++.| .+|++..|+.. ..+.+.+++ . ...++.
T Consensus 3 rL~gK~alVTGas~GIG~aia~~la~~G---a~V~~~~r~~~---~~~~~~~~~-------------~------~~~~~~ 57 (251)
T d1zk4a1 3 RLDGKVAIITGGTLGIGLAIATKFVEEG---AKVMITGRHSD---VGEKAAKSV-------------G------TPDQIQ 57 (251)
T ss_dssp TTTTCEEEETTTTSHHHHHHHHHHHHTT---CEEEEEESCHH---HHHHHHHHH-------------C------CTTTEE
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHCC---CEEEEEECCHH---HHHHHHHHh-------------C------CCCcEE
Confidence 3789999999999999999999999999 67888888632 222222111 1 135789
Q ss_pred EEeccCCCCCCCCChhhhHHHHhcCccEEEEcCccCCc-------cccHHHHHHHhHHHHHHHHHHHHh-cc--CC-ceE
Q 010075 89 FVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKK-CV--KL-KVF 157 (519)
Q Consensus 89 ~v~gDl~~~~lgls~~~~~~~l~~~vdiViH~Aa~v~f-------~~~~~~~~~~Nv~gt~~ll~~a~~-~~--~l-~~~ 157 (519)
++.+|+++++-.-.-.+...+...++|++||+|+.... .+.++..+++|+.|+..+.+.+.. +. +- .++
T Consensus 58 ~~~~Dv~~~~~v~~~~~~~~~~~G~iDiLVnnAg~~~~~~~~~~~~~~~~~~~~vnl~g~~~~~~~~~~~m~~~~~gg~I 137 (251)
T d1zk4a1 58 FFQHDSSDEDGWTKLFDATEKAFGPVSTLVNNAGIAVNKSVEETTTAEWRKLLAVNLDGVFFGTRLGIQRMKNKGLGASI 137 (251)
T ss_dssp EEECCTTCHHHHHHHHHHHHHHHSSCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSCEEE
T ss_pred EEEccCCCHHHHHHHHHHHHHHhCCceEEEeccccccccchhcccccchhhhccccccccchhHHHHHHHHHhcCCCCce
Confidence 99999996321000000111223469999999998642 256888999999999999887643 32 22 478
Q ss_pred EEEecceeecCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcHHHHHHHH
Q 010075 158 VHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTM 237 (519)
Q Consensus 158 V~vSTa~v~~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~Y~~sK~~ 237 (519)
|++||....... +....|+.||+.
T Consensus 138 i~isS~~~~~~~--------------------------------------------------------~~~~~Y~asKaa 161 (251)
T d1zk4a1 138 INMSSIEGFVGD--------------------------------------------------------PSLGAYNASKGA 161 (251)
T ss_dssp EEECCGGGTSCC--------------------------------------------------------TTCHHHHHHHHH
T ss_pred EeeeccceeccC--------------------------------------------------------CCchhHHHHHHH
Confidence 999987543211 123579999999
Q ss_pred HHHHHHHh-------hcCCcEEEEecCccccCCCCCCCcccccccccHHHHHHhhcCCceeeccCCCceeeeeeHHHHHH
Q 010075 238 GEMLMQQS-------KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVN 310 (519)
Q Consensus 238 aE~lv~~~-------~~~lp~~IvRPs~V~g~~~~p~~gw~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~d~vpVDdva~ 310 (519)
.+.+.+.. ..++.+..|-||.|-.+..+..+ ... ........ . ...-+...+|+|+
T Consensus 162 l~~lt~~lA~e~~l~~~gIrVN~I~PG~i~T~~~~~~~-------~~~-~~~~~~~~----~-----pl~R~~~pedvA~ 224 (251)
T d1zk4a1 162 VRIMSKSAALDCALKDYDVRVNTVHPGYIKTPLVDDLP-------GAE-EAMSQRTK----T-----PMGHIGEPNDIAY 224 (251)
T ss_dssp HHHHHHHHHHHHHHTTCSEEEEEEEECCBCCHHHHTST-------THH-HHHTSTTT----C-----TTSSCBCHHHHHH
T ss_pred HhcchHHHHHHHhcCCCcEEEEEEeCCCCCChhHHhcC-------CHH-HHHHHHhC----C-----CCCCCcCHHHHHH
Confidence 88877642 34799999999998654322111 110 11111100 1 1112456899999
Q ss_pred HHHHHHHHhccCCCCCcEEEecCC
Q 010075 311 AMIVAMVAHAKQPSDANIYHVGSS 334 (519)
Q Consensus 311 aii~a~~~~~~~~~~~~iyni~s~ 334 (519)
+++.++.... .--.++++++.+|
T Consensus 225 ~v~fL~S~~s-~~itG~~i~vDGG 247 (251)
T d1zk4a1 225 ICVYLASNES-KFATGSEFVVDGG 247 (251)
T ss_dssp HHHHHHSGGG-TTCCSCEEEESTT
T ss_pred HHHHHhCchh-CCCcCcEEEECcc
Confidence 9998886432 2224788888776
|
| >d1spxa_ c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nematode (Caenorhabditis elegans) [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Glucose dehydrogenase (5l265) species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Probab=99.60 E-value=8.6e-15 Score=141.38 Aligned_cols=232 Identities=14% Similarity=0.114 Sum_probs=140.9
Q ss_pred cCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 010075 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (519)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (519)
++||+++||||++.||++++++|++.| .+|++..|+... .+.+.+++ ++... ...++.+
T Consensus 3 l~gKvalVTGas~GIG~aia~~la~~G---a~V~~~~r~~~~---l~~~~~~l---------~~~~~------~~~~~~~ 61 (264)
T d1spxa_ 3 FAEKVAIITGSSNGIGRATAVLFAREG---AKVTITGRHAER---LEETRQQI---------LAAGV------SEQNVNS 61 (264)
T ss_dssp TTTCEEEETTTTSHHHHHHHHHHHHTT---CEEEEEESCHHH---HHHHHHHH---------HHTTC------CGGGEEE
T ss_pred CCCCEEEEeCcCCHHHHHHHHHHHHCC---CEEEEEECCHHH---HHHHHHHH---------HhcCC------CcCceEE
Confidence 689999999999999999999999999 678888887422 22222222 11111 1257899
Q ss_pred EeccCCCCCCCCChhhhHHHHh-------cCccEEEEcCccCC-------c----cccHHHHHHHhHHHHHHHHHHHHhc
Q 010075 90 VPGDISSEDLGLKDSNLKEELW-------NELDIMVNSAAITK-------F----DERYDVAFGINTLGVIHLVNFAKKC 151 (519)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~-------~~vdiViH~Aa~v~-------f----~~~~~~~~~~Nv~gt~~ll~~a~~~ 151 (519)
+.+|++++ +..+.++ .++|++||+||... + .+.++..+++|+.|+..+.+.+.+.
T Consensus 62 ~~~Dvt~~-------~~v~~~~~~~~~~~g~iDilvnnAG~~~~~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~p~ 134 (264)
T d1spxa_ 62 VVADVTTD-------AGQDEILSTTLGKFGKLDILVNNAGAAIPDSQSKTGTAQSIESYDATLNLNLRSVIALTKKAVPH 134 (264)
T ss_dssp EECCTTSH-------HHHHHHHHHHHHHHSCCCEEEECCC-------------CCHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred EEccCCCH-------HHHHHHHHHHHHHhCCCCEeecccccccCCccccccccCCHHHHHHHHHHhHHHHHHHHhhhCCc
Confidence 99999963 2222332 47999999998642 1 1457888999999998888877542
Q ss_pred --cCCceEEEEeccee-ecCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCC
Q 010075 152 --VKLKVFVHVSTAYV-AGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWP 228 (519)
Q Consensus 152 --~~l~~~V~vSTa~v-~~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~ 228 (519)
++-..+|.++|... .... +..
T Consensus 135 m~~~~g~iI~~~S~~~~~~~~--------------------------------------------------------~~~ 158 (264)
T d1spxa_ 135 LSSTKGEIVNISSIASGLHAT--------------------------------------------------------PDF 158 (264)
T ss_dssp HHHHTCEEEEECCTTSSSSCC--------------------------------------------------------TTS
T ss_pred cccccCcceeeeeeccccccC--------------------------------------------------------CCc
Confidence 12245666666432 1100 123
Q ss_pred cHHHHHHHHHHHHHHHh-----hcCCcEEEEecCccccCCCCCCCcccccccccHHHHHHhhcCCceeeccCCCceeeee
Q 010075 229 NTYVFTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVI 303 (519)
Q Consensus 229 n~Y~~sK~~aE~lv~~~-----~~~lp~~IvRPs~V~g~~~~p~~gw~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~d~v 303 (519)
..|+.||+..+.+.+.. ..++.+..|-||.|-.+.........+............... .| ..-+.
T Consensus 159 ~~Y~asKaal~~lt~~lA~el~~~gIrVN~V~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~----~P-----l~R~g 229 (264)
T d1spxa_ 159 PYYSIAKAAIDQYTRNTAIDLIQHGIRVNSISPGLVATGFGSAMGMPEETSKKFYSTMATMKEC----VP-----AGVMG 229 (264)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCCCC--------------HHHHHHHHHH----CT-----TSSCB
T ss_pred hhhhhhhhhHHHHHHHHHHHhcccCeEEEEEeeCCCCCcchhccCCcHHHHHHHHHHHHHHHhc----CC-----CCCCc
Confidence 46999999998887754 457999999999987654321110000001111111111110 01 11234
Q ss_pred eHHHHHHHHHHHHHHhccCCCCCcEEEecCC
Q 010075 304 PVDMVVNAMIVAMVAHAKQPSDANIYHVGSS 334 (519)
Q Consensus 304 pVDdva~aii~a~~~~~~~~~~~~iyni~s~ 334 (519)
..+|+|++++.++..+...--.++++.+.+|
T Consensus 230 ~pedvA~~v~fL~S~~~s~~itG~~i~vDGG 260 (264)
T d1spxa_ 230 QPQDIAEVIAFLADRKTSSYIIGHQLVVDGG 260 (264)
T ss_dssp CHHHHHHHHHHHHCHHHHTTCCSCEEEESTT
T ss_pred CHHHHHHHHHHHhCCcccCCccCceEEeCCC
Confidence 5789999999888533222223678888776
|
| >d1o5ia_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Thermotoga maritima [TaxId: 2336]
Probab=99.60 E-value=3.3e-14 Score=134.68 Aligned_cols=213 Identities=12% Similarity=0.073 Sum_probs=144.6
Q ss_pred cCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 010075 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (519)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (519)
++||+++||||++.||+++++.|++.| .+|++..|++ +.+++ ...+.
T Consensus 2 LkgK~~lVTGas~GIG~aia~~l~~~G---a~V~~~~r~~------~~l~~------------------------~~~~~ 48 (234)
T d1o5ia_ 2 IRDKGVLVLAASRGIGRAVADVLSQEG---AEVTICARNE------ELLKR------------------------SGHRY 48 (234)
T ss_dssp CTTCEEEEESCSSHHHHHHHHHHHHTT---CEEEEEESCH------HHHHH------------------------TCSEE
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCC---CEEEEEECCH------HHHHh------------------------cCCcE
Confidence 579999999999999999999999999 6888888863 22221 23456
Q ss_pred EeccCCCCCCCCChhhhHHHHhcCccEEEEcCccCCc-------cccHHHHHHHhHHHHHHHHHHHHhc---cCCceEEE
Q 010075 90 VPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKC---VKLKVFVH 159 (519)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~~~vdiViH~Aa~v~f-------~~~~~~~~~~Nv~gt~~ll~~a~~~---~~l~~~V~ 159 (519)
+.+|+++ +.+...+-..++|++||+||.... .+.++..+++|+.++..+.+.+.+. ++-.++|+
T Consensus 49 ~~~Dv~~------~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~G~ii~ 122 (234)
T d1o5ia_ 49 VVCDLRK------DLDLLFEKVKEVDILVLNAGGPKAGFFDELTNEDFKEAIDSLFLNMIKIVRNYLPAMKEKGWGRIVA 122 (234)
T ss_dssp EECCTTT------CHHHHHHHSCCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEE
T ss_pred EEcchHH------HHHHHHHHhCCCcEEEecccccCCcchhhhhhHHHHHHhhhhhhhhhhhhhcccccccccccccccc
Confidence 7899985 233333556789999999997542 2568888999999988887766431 24568999
Q ss_pred EecceeecCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcHHHHHHHHHH
Q 010075 160 VSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGE 239 (519)
Q Consensus 160 vSTa~v~~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~Y~~sK~~aE 239 (519)
+||....... .....|+.+|+..+
T Consensus 123 i~S~~~~~~~--------------------------------------------------------~~~~~Y~asKaal~ 146 (234)
T d1o5ia_ 123 ITSFSVISPI--------------------------------------------------------ENLYTSNSARMALT 146 (234)
T ss_dssp ECCGGGTSCC--------------------------------------------------------TTBHHHHHHHHHHH
T ss_pred cccccccccc--------------------------------------------------------cccccchhHHHHHH
Confidence 9987543211 23457999999888
Q ss_pred HHHHHh-----hcCCcEEEEecCccccCCCCCCCcccccccccHHHHHHhhcCCceeeccCCCceeeeeeHHHHHHHHHH
Q 010075 240 MLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMIV 314 (519)
Q Consensus 240 ~lv~~~-----~~~lp~~IvRPs~V~g~~~~p~~gw~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~d~vpVDdva~aii~ 314 (519)
.+.+.. ..++.+..+-||.|-.+..... ............ ....-+...+|+|++++.
T Consensus 147 ~ltk~lA~ela~~gIrVN~I~PG~v~T~~~~~~--------~~~~~~~~~~~~---------~pl~R~~~pediA~~v~f 209 (234)
T d1o5ia_ 147 GFLKTLSFEVAPYGITVNCVAPGWTETERVKEL--------LSEEKKKQVESQ---------IPMRRMAKPEEIASVVAF 209 (234)
T ss_dssp HHHHHHHHHHGGGTEEEEEEEECSBCCTTHHHH--------SCHHHHHHHHTT---------STTSSCBCHHHHHHHHHH
T ss_pred HHHHHHHHHhcccCeEEeecccCccchhhhhhh--------cCHHHHHHHHhc---------CCCCCCcCHHHHHHHHHH
Confidence 777654 4579999999998866532110 001111111111 111235668899999998
Q ss_pred HHHHhccCCCCCcEEEecCCC
Q 010075 315 AMVAHAKQPSDANIYHVGSSL 335 (519)
Q Consensus 315 a~~~~~~~~~~~~iyni~s~~ 335 (519)
++... ..--.+++..+.+|-
T Consensus 210 L~S~~-s~~itG~~i~vDGG~ 229 (234)
T d1o5ia_ 210 LCSEK-ASYLTGQTIVVDGGL 229 (234)
T ss_dssp HHSGG-GTTCCSCEEEESTTC
T ss_pred HhChh-hcCCcCcEEEECccc
Confidence 88533 222247889888773
|
| >d1xhla_ c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorhabditis elegans [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein F25D1.5 species: Caenorhabditis elegans [TaxId: 6239]
Probab=99.58 E-value=1.7e-14 Score=140.00 Aligned_cols=232 Identities=12% Similarity=0.122 Sum_probs=145.0
Q ss_pred cCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 010075 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (519)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (519)
++||+++||||++.||++++++|++.| .+|++..|+... .+.+.+++ ++... ...++..
T Consensus 2 L~gK~alITGas~GIG~aia~~la~~G---a~V~~~~r~~~~---l~~~~~~i---------~~~~~------~~~~~~~ 60 (274)
T d1xhla_ 2 FSGKSVIITGSSNGIGRSAAVIFAKEG---AQVTITGRNEDR---LEETKQQI---------LKAGV------PAEKINA 60 (274)
T ss_dssp CTTCEEEETTCSSHHHHHHHHHHHHTT---CEEEEEESCHHH---HHHHHHHH---------HHTTC------CGGGEEE
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCC---CEEEEEECCHHH---HHHHHHHH---------HHcCC------CCcceEE
Confidence 689999999999999999999999999 688888886422 22222222 11111 1257899
Q ss_pred EeccCCCCCCCCChhhhHHHH-------hcCccEEEEcCccCCc---------cccHHHHHHHhHHHHHHHHHHHHhc--
Q 010075 90 VPGDISSEDLGLKDSNLKEEL-------WNELDIMVNSAAITKF---------DERYDVAFGINTLGVIHLVNFAKKC-- 151 (519)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l-------~~~vdiViH~Aa~v~f---------~~~~~~~~~~Nv~gt~~ll~~a~~~-- 151 (519)
+.+|++++ +..+.+ ..++|++||+||.... .+.++..+++|+.|+..+.+.+.+.
T Consensus 61 ~~~Dv~~~-------~~v~~~~~~~~~~~G~iDilVnnAG~~~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~ 133 (274)
T d1xhla_ 61 VVADVTEA-------SGQDDIINTTLAKFGKIDILVNNAGANLADGTANTDQPVELYQKTFKLNFQAVIEMTQKTKEHLI 133 (274)
T ss_dssp EECCTTSH-------HHHHHHHHHHHHHHSCCCEEEECCCCCCCCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHH
T ss_pred EEeeCCCH-------HHHHHHHHHHHHHcCCceEEEeecccccccccccccCCHHHHHHHHhhccccccccccccccccc
Confidence 99999963 222232 2479999999986421 1457888999999999888776542
Q ss_pred -cCCceEEEEecceeecCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcH
Q 010075 152 -VKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNT 230 (519)
Q Consensus 152 -~~l~~~V~vSTa~v~~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~ 230 (519)
.+-..++.+||....... .....
T Consensus 134 ~~~~g~ii~~ss~~~~~~~--------------------------------------------------------~~~~~ 157 (274)
T d1xhla_ 134 KTKGEIVNVSSIVAGPQAH--------------------------------------------------------SGYPY 157 (274)
T ss_dssp HTTCEEEEECCGGGSSSCC--------------------------------------------------------TTSHH
T ss_pred ccccccccchhhhhccccC--------------------------------------------------------CCCce
Confidence 244567777765422110 11346
Q ss_pred HHHHHHHHHHHHHHh-----hcCCcEEEEecCccccCCCCCCCcccccccccHHHHHHhhcCCceeeccCCCceeeeeeH
Q 010075 231 YVFTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPV 305 (519)
Q Consensus 231 Y~~sK~~aE~lv~~~-----~~~lp~~IvRPs~V~g~~~~p~~gw~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~d~vpV 305 (519)
|+.||+..+.+.+.. ..++.+..|-||.|-.+..................+...... .| ..-+...
T Consensus 158 Y~asKaal~~ltk~lA~ela~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~----iP-----lgR~g~p 228 (274)
T d1xhla_ 158 YACAKAALDQYTRCTAIDLIQHGVRVNSVSPGAVATGFMGAMGLPETASDKLYSFIGSRKEC----IP-----VGHCGKP 228 (274)
T ss_dssp HHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSSHHHHTTCCHHHHHHHHHHHHHCTTT----CT-----TSSCBCH
T ss_pred ehhhhhHHHHHHHHHHHHHhHhCCceeeeccCCCcCchhhhhcccchhhHHHHHHHHHHHcC----CC-----CCCCcCH
Confidence 999999998888754 557999999999986543211100000000001111111111 11 1124567
Q ss_pred HHHHHHHHHHHHHhccCCCCCcEEEecCC
Q 010075 306 DMVVNAMIVAMVAHAKQPSDANIYHVGSS 334 (519)
Q Consensus 306 Ddva~aii~a~~~~~~~~~~~~iyni~s~ 334 (519)
+|+|++++.++......--.+++..+.+|
T Consensus 229 ediA~~v~fL~S~d~s~~itG~~i~vDGG 257 (274)
T d1xhla_ 229 EEIANIIVFLADRNLSSYIIGQSIVADGG 257 (274)
T ss_dssp HHHHHHHHHHHCHHHHTTCCSCEEEESTT
T ss_pred HHHHHHHHHHcCCccccCccCcEEEeCcC
Confidence 99999999887532222223788999887
|
| >d1bdba_ c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Pseudomonas sp., lb400 [TaxId: 306]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase species: Pseudomonas sp., lb400 [TaxId: 306]
Probab=99.58 E-value=1e-14 Score=141.84 Aligned_cols=226 Identities=14% Similarity=0.178 Sum_probs=142.1
Q ss_pred cCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 010075 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (519)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (519)
++||+++||||++.||++++++|++.| .+|++..|+. +++.+ +.++. ..++..
T Consensus 3 L~gK~alITGas~GIG~aia~~la~~G---a~V~i~~r~~------~~l~~----------~~~~~--------~~~~~~ 55 (276)
T d1bdba_ 3 LKGEAVLITGGASGLGRALVDRFVAEG---AKVAVLDKSA------ERLAE----------LETDH--------GDNVLG 55 (276)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHTT---CEEEEEESCH------HHHHH----------HHHHH--------GGGEEE
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCC---CEEEEEECCH------HHHHH----------HHHHc--------CCCeeE
Confidence 579999999999999999999999999 6888888863 22221 11122 257899
Q ss_pred EeccCCCCCCCCChhhhHHHH-------hcCccEEEEcCccCCcc------------ccHHHHHHHhHHHHHHHHHHHHh
Q 010075 90 VPGDISSEDLGLKDSNLKEEL-------WNELDIMVNSAAITKFD------------ERYDVAFGINTLGVIHLVNFAKK 150 (519)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l-------~~~vdiViH~Aa~v~f~------------~~~~~~~~~Nv~gt~~ll~~a~~ 150 (519)
+.+|+++++ + .+.+ ...+|++||+||...+. +.++..+++|+.|+..+.+.+.+
T Consensus 56 ~~~Dv~~~~------~-~~~~~~~~~~~~g~idilvnnAG~~~~~~~~~~~~~e~~~~~~~~~~~vNl~g~~~~~~~~~p 128 (276)
T d1bdba_ 56 IVGDVRSLE------D-QKQAASRCVARFGKIDTLIPNAGIWDYSTALVDLPEESLDAAFDEVFHINVKGYIHAVKACLP 128 (276)
T ss_dssp EECCTTCHH------H-HHHHHHHHHHHHSCCCEEECCCCCCCTTCCGGGSCTTTHHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred EecccccHH------H-HHHHHHHHHHHhCCcccccccccccCCCCccccccccchhhhhhHHHHHhhHHHHHHHHHHHH
Confidence 999999632 2 2232 34799999999965321 23788899999999888877643
Q ss_pred c--cCCceEEEEecceeecCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCC
Q 010075 151 C--VKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWP 228 (519)
Q Consensus 151 ~--~~l~~~V~vSTa~v~~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~ 228 (519)
. ++-.++|++||....-.. ...
T Consensus 129 ~m~~~~g~iI~i~S~~~~~~~--------------------------------------------------------~~~ 152 (276)
T d1bdba_ 129 ALVASRGNVIFTISNAGFYPN--------------------------------------------------------GGG 152 (276)
T ss_dssp HHHHHTCEEEEECCGGGTSTT--------------------------------------------------------SSC
T ss_pred HHHhcCCCceeeeechhccCC--------------------------------------------------------CCC
Confidence 2 122578888876432110 123
Q ss_pred cHHHHHHHHHHHHHHHh----hcCCcEEEEecCccccCCCCCCCccccc-ccccHHHHHHhhcCCceeeccCCCceeeee
Q 010075 229 NTYVFTKTMGEMLMQQS----KENLSLVIIRPTVVSGTYKEPFPGWVED-LKTINTLFVASAQGNLRCLVGETKVIMDVI 303 (519)
Q Consensus 229 n~Y~~sK~~aE~lv~~~----~~~lp~~IvRPs~V~g~~~~p~~gw~~~-~~~~~~~i~~~~~g~~~~~~~~~~~~~d~v 303 (519)
..|+.||+..+.+.+.. .+++.+..|.||.|-.+...+...+... ......+...+.... ...-+.
T Consensus 153 ~~Y~asKaal~~ltr~lA~ela~~IrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------PlgR~g 223 (276)
T d1bdba_ 153 PLYTAAKHAIVGLVRELAFELAPYVRVNGVGSGGINSDLRGPSSLGMGSKAISTVPLADMLKSVL---------PIGRMP 223 (276)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCSCCCCCGGGC---------CHHHHHTTTC---------TTSSCC
T ss_pred chHHHHHHHHHHHHHHHHHHhhcceEEcccCCCCEecCcCCccchhhhhhccCcHHHHHHHHhcC---------CCCCCc
Confidence 46999999988887754 4569999999999876543332111111 000011111111111 111234
Q ss_pred eHHHHHHHHHHHHHHhccCCCCCcEEEecCC
Q 010075 304 PVDMVVNAMIVAMVAHAKQPSDANIYHVGSS 334 (519)
Q Consensus 304 pVDdva~aii~a~~~~~~~~~~~~iyni~s~ 334 (519)
..+|+|++++.++......--.++++++.+|
T Consensus 224 ~peeva~~v~fL~S~~~a~~itG~~i~VDGG 254 (276)
T d1bdba_ 224 EVEEYTGAYVFFATRGDAAPATGALLNYDGG 254 (276)
T ss_dssp CGGGGSHHHHHHHCHHHHTTCSSCEEEESSS
T ss_pred CHHHHHHHHHHHcCCcccCCeeCcEEEECcC
Confidence 5688999988776422122123688999877
|
| >d1yb1a_ c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase type XI {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 17-beta-hydroxysteroid dehydrogenase type XI species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.58 E-value=1e-14 Score=139.00 Aligned_cols=174 Identities=13% Similarity=0.105 Sum_probs=120.9
Q ss_pred hcCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceE
Q 010075 9 FLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKIT 88 (519)
Q Consensus 9 ~~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~ 88 (519)
-++||+|+||||++.||++++++|++.| .+|++..|++.. .+.+.+++ ++ ...++.
T Consensus 4 ~l~Gkv~lITGas~GIG~~ia~~la~~G---~~V~l~~r~~~~---l~~~~~~~---------~~---------~~~~~~ 59 (244)
T d1yb1a_ 4 SVTGEIVLITGAGHGIGRLTAYEFAKLK---SKLVLWDINKHG---LEETAAKC---------KG---------LGAKVH 59 (244)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHTT---CEEEEEESCHHH---HHHHHHHH---------HH---------TTCCEE
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCC---CEEEEEECCHHH---HHHHHHHH---------Hh---------cCCcEE
Confidence 3689999999999999999999999999 688999997432 22222221 11 135789
Q ss_pred EEeccCCCCCCCCChhhhHHHHhcCccEEEEcCccCCcc-------ccHHHHHHHhHHHHHHHHHHHHh-c--cCCceEE
Q 010075 89 FVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKFD-------ERYDVAFGINTLGVIHLVNFAKK-C--VKLKVFV 158 (519)
Q Consensus 89 ~v~gDl~~~~lgls~~~~~~~l~~~vdiViH~Aa~v~f~-------~~~~~~~~~Nv~gt~~ll~~a~~-~--~~l~~~V 158 (519)
.+.+|+++++.-....+....-..++|++||+||..... +.++..+++|+.|+..+.+.+.. + ++-.++|
T Consensus 60 ~~~~Dvs~~~~v~~~~~~i~~~~g~idilinnag~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~G~Iv 139 (244)
T d1yb1a_ 60 TFVVDCSNREDIYSSAKKVKAEIGDVSILVNNAGVVYTSDLFATQDPQIEKTFEVNVLAHFWTTKAFLPAMTKNNHGHIV 139 (244)
T ss_dssp EEECCTTCHHHHHHHHHHHHHHTCCCSEEEECCCCCCCCCCGGGHHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEE
T ss_pred EEEeeCCCHHHHHHHHHHHHHHcCCCceeEeeccccccccccccchhHHHhhcceeeeccHHHHHHHhhhHHhcCCceEE
Confidence 999999964310000000111234699999999987432 45778899999999988876643 2 3456899
Q ss_pred EEecceeecCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcHHHHHHHHH
Q 010075 159 HVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMG 238 (519)
Q Consensus 159 ~vSTa~v~~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~Y~~sK~~a 238 (519)
++||....... +....|+.||+..
T Consensus 140 ~isS~~~~~~~--------------------------------------------------------~~~~~Y~asKaal 163 (244)
T d1yb1a_ 140 TVASAAGHVSV--------------------------------------------------------PFLLAYCSSKFAA 163 (244)
T ss_dssp EECCCC-CCCH--------------------------------------------------------HHHHHHHHHHHHH
T ss_pred EeecchhcCCC--------------------------------------------------------CCcHHHHHHHHHH
Confidence 99998654211 1124699999988
Q ss_pred HHHHHHh--------hcCCcEEEEecCccccC
Q 010075 239 EMLMQQS--------KENLSLVIIRPTVVSGT 262 (519)
Q Consensus 239 E~lv~~~--------~~~lp~~IvRPs~V~g~ 262 (519)
+.+.+.. ..++.+..+.||.|-.+
T Consensus 164 ~~~~~~La~El~~~~~~gI~V~~i~PG~v~T~ 195 (244)
T d1yb1a_ 164 VGFHKTLTDELAALQITGVKTTCLCPNFVNTG 195 (244)
T ss_dssp HHHHHHHHHHHHHTTCTTEEEEEEEETHHHHC
T ss_pred HHHHHHHHHHHHhhcCCCEEEEEEEcCCCCCh
Confidence 8777654 14689999999988554
|
| >d1hxha_ c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 3beta/17beta hydroxysteroid dehydrogenase species: Comamonas testosteroni [TaxId: 285]
Probab=99.58 E-value=1.8e-14 Score=138.12 Aligned_cols=228 Identities=15% Similarity=0.091 Sum_probs=145.9
Q ss_pred hcCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceE
Q 010075 9 FLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKIT 88 (519)
Q Consensus 9 ~~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~ 88 (519)
-++||+++||||++.||+++++.|++.| .+|++..|+.. ..+++. ++. ..+..
T Consensus 3 rL~gK~alITGas~GIG~aia~~la~~G---a~V~~~~~~~~---~~~~~~-------------~~~--------~~~~~ 55 (253)
T d1hxha_ 3 RLQGKVALVTGGASGVGLEVVKLLLGEG---AKVAFSDINEA---AGQQLA-------------AEL--------GERSM 55 (253)
T ss_dssp TTTTCEEEETTTTSHHHHHHHHHHHHTT---CEEEEECSCHH---HHHHHH-------------HHH--------CTTEE
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHCC---CEEEEEECCHH---HHHHHH-------------HHh--------CCCeE
Confidence 4789999999999999999999999999 67888887532 222222 222 35778
Q ss_pred EEeccCCCCCCCCChhhhHHHHhcCccEEEEcCccCCc-------cccHHHHHHHhHHHHHHHHHHHHh-c-cCCceEEE
Q 010075 89 FVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKK-C-VKLKVFVH 159 (519)
Q Consensus 89 ~v~gDl~~~~lgls~~~~~~~l~~~vdiViH~Aa~v~f-------~~~~~~~~~~Nv~gt~~ll~~a~~-~-~~l~~~V~ 159 (519)
++.+|++++.---.-.+.......++|++||+||.... .+.++..+++|+.|+..+.+.+.+ + ++-.++|+
T Consensus 56 ~~~~Dv~~~~~~~~~~~~~~~~~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~G~Iv~ 135 (253)
T d1hxha_ 56 FVRHDVSSEADWTLVMAAVQRRLGTLNVLVNNAGILLPGDMETGRLEDFSRLLKINTESVFIGCQQGIAAMKETGGSIIN 135 (253)
T ss_dssp EECCCTTCHHHHHHHHHHHHHHHCSCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTCEEEEE
T ss_pred EEEeecCCHHHHHHHHHHHHHHhCCCCeEEecccccCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHhcCCceec
Confidence 89999996321000001111123479999999997642 256889999999999988877644 2 23478999
Q ss_pred EecceeecCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcHHHHHHHHHH
Q 010075 160 VSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGE 239 (519)
Q Consensus 160 vSTa~v~~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~Y~~sK~~aE 239 (519)
+||....... +....|+.||+..+
T Consensus 136 isS~~~~~~~--------------------------------------------------------~~~~~Y~asKaal~ 159 (253)
T d1hxha_ 136 MASVSSWLPI--------------------------------------------------------EQYAGYSASKAAVS 159 (253)
T ss_dssp ECCGGGTSCC--------------------------------------------------------TTBHHHHHHHHHHH
T ss_pred ccchhhhcCc--------------------------------------------------------cccccccchhHHHH
Confidence 9997643211 22357999999988
Q ss_pred HHHHHh-----h--cCCcEEEEecCccccCCCCC-CCcccccccccHHHHHHhhcCCceeeccCCCceeeeeeHHHHHHH
Q 010075 240 MLMQQS-----K--ENLSLVIIRPTVVSGTYKEP-FPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNA 311 (519)
Q Consensus 240 ~lv~~~-----~--~~lp~~IvRPs~V~g~~~~p-~~gw~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~d~vpVDdva~a 311 (519)
.+.+.. . .++.+..|-||.|-.+..+. .+. . ...... .... .....-.+...+|+|++
T Consensus 160 ~lt~~lA~e~~~~g~~IrVN~I~PG~i~T~~~~~~~~~---~--~~~~~~----~~~~-----~~~~~gr~~~pedvA~~ 225 (253)
T d1hxha_ 160 ALTRAAALSCRKQGYAIRVNSIHPDGIYTPMMQASLPK---G--VSKEMV----LHDP-----KLNRAGRAYMPERIAQL 225 (253)
T ss_dssp HHHHHHHHHHHHHTCCEEEEEEEESEECCHHHHHHSCT---T--CCHHHH----BCBT-----TTBTTCCEECHHHHHHH
T ss_pred HHHHHHHHHHhhcCCCEEEEEEeECCCcCHhHHhhCcc---h--hhHHHH----HhCc-----cccccCCCCCHHHHHHH
Confidence 887643 2 35899999999886542100 000 0 000000 0000 00111245678999999
Q ss_pred HHHHHHHhccCCCCCcEEEecCC
Q 010075 312 MIVAMVAHAKQPSDANIYHVGSS 334 (519)
Q Consensus 312 ii~a~~~~~~~~~~~~iyni~s~ 334 (519)
++.++.... .--.+++.++.+|
T Consensus 226 v~fL~S~~s-~~itG~~i~VDGG 247 (253)
T d1hxha_ 226 VLFLASDES-SVMSGSELHADNS 247 (253)
T ss_dssp HHHHHSGGG-TTCCSCEEEESSS
T ss_pred HHHHhChhh-CCCcCcEEEECcc
Confidence 998886432 2224788888776
|
| >d2rhca1 c.2.1.2 (A:5-261) beta-keto acyl carrier protein reductase {Streptomyces coelicolor [TaxId: 1902]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Streptomyces coelicolor [TaxId: 1902]
Probab=99.58 E-value=9.1e-15 Score=140.66 Aligned_cols=229 Identities=14% Similarity=0.122 Sum_probs=148.4
Q ss_pred CCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEE
Q 010075 11 ENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFV 90 (519)
Q Consensus 11 ~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v 90 (519)
.||++|||||++.||++++++|++.| .+|++..|+.. ..+++.+++ ++. ..++.++
T Consensus 1 DgKValITGas~GIG~aia~~la~~G---a~V~i~~r~~~---~l~~~~~~l---------~~~---------g~~~~~~ 56 (257)
T d2rhca1 1 DSEVALVTGATSGIGLEIARRLGKEG---LRVFVCARGEE---GLRTTLKEL---------REA---------GVEADGR 56 (257)
T ss_dssp CCCEEEEESCSSHHHHHHHHHHHHTT---CEEEEEESCHH---HHHHHHHHH---------HHT---------TCCEEEE
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCC---CEEEEEECCHH---HHHHHHHHH---------Hhc---------CCcEEEE
Confidence 48999999999999999999999999 67888888632 222222221 111 2578899
Q ss_pred eccCCCCCCCCChhhhHHHH-------hcCccEEEEcCccCCc-------cccHHHHHHHhHHHHHHHHHHHHhc-----
Q 010075 91 PGDISSEDLGLKDSNLKEEL-------WNELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKC----- 151 (519)
Q Consensus 91 ~gDl~~~~lgls~~~~~~~l-------~~~vdiViH~Aa~v~f-------~~~~~~~~~~Nv~gt~~ll~~a~~~----- 151 (519)
.+|+++++ ..+.+ ..++|++||+||.... .+.++..+++|+.|+..+.+.+.+.
T Consensus 57 ~~Dvs~~~-------~v~~~~~~~~~~~g~iDilVnnAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~~~~~~ 129 (257)
T d2rhca1 57 TCDVRSVP-------EIEALVAAVVERYGPVDVLVNNAGRPGGGATAELADELWLDVVETNLTGVFRVTKQVLKAGGMLE 129 (257)
T ss_dssp ECCTTCHH-------HHHHHHHHHHHHTCSCSEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTTSHHH
T ss_pred EeecCCHH-------HHHHHHHHHHHHhCCCCEEEecccccCCCChHHcCHHHHHHHHHHHhhhhhHHHHHHhHHHHHHh
Confidence 99999642 22232 2469999999998643 2578899999999999999987642
Q ss_pred cCCceEEEEecceeecCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcHH
Q 010075 152 VKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTY 231 (519)
Q Consensus 152 ~~l~~~V~vSTa~v~~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~Y 231 (519)
++-.++|.+||....... .....|
T Consensus 130 ~~~g~Ii~i~S~~~~~~~--------------------------------------------------------~~~~~Y 153 (257)
T d2rhca1 130 RGTGRIVNIASTGGKQGV--------------------------------------------------------VHAAPY 153 (257)
T ss_dssp HTEEEEEEECCGGGTSCC--------------------------------------------------------TTCHHH
T ss_pred cCCccccccccccccccc--------------------------------------------------------ccchhH
Confidence 244688999887543211 123579
Q ss_pred HHHHHHHHHHHHHh-----hcCCcEEEEecCccccCCCCCC-Ccccccc-cccHHHHHHhhcCCceeeccCCCceeeeee
Q 010075 232 VFTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPF-PGWVEDL-KTINTLFVASAQGNLRCLVGETKVIMDVIP 304 (519)
Q Consensus 232 ~~sK~~aE~lv~~~-----~~~lp~~IvRPs~V~g~~~~p~-~gw~~~~-~~~~~~i~~~~~g~~~~~~~~~~~~~d~vp 304 (519)
+.||+..+.+.+.. ..++.+..|-||.|-.+..+.. ..+.+.. .........+.... ...-+.-
T Consensus 154 ~asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~e~~~~~~~~~---------PlgR~~~ 224 (257)
T d2rhca1 154 SASKHGVVGFTKALGLELARTGITVNAVCPGFVETPMAASVREHYSDIWEVSTEEAFDRITARV---------PIGRYVQ 224 (257)
T ss_dssp HHHHHHHHHHHHHHHHHTTTSEEEEEEEEECSBCSHHHHHHHHHHHHHTTCCHHHHHHHHHTTS---------TTSSCBC
T ss_pred HHHHHHHHHHHHHHHHHhhhhCcEEEEEeeCCCCCHHHHHHHhhhhhhcccChHHHHHHHHhcC---------CCCCCcC
Confidence 99999998888754 4569999999998855321100 0000000 01111222222111 1112456
Q ss_pred HHHHHHHHHHHHHHhccCCCCCcEEEecCCCC
Q 010075 305 VDMVVNAMIVAMVAHAKQPSDANIYHVGSSLR 336 (519)
Q Consensus 305 VDdva~aii~a~~~~~~~~~~~~iyni~s~~~ 336 (519)
.+|+|++++.++.... .--.++++.+.+|-.
T Consensus 225 pedia~~v~fL~S~~s-~~itG~~i~vDGG~~ 255 (257)
T d2rhca1 225 PSEVAEMVAYLIGPGA-AAVTAQALNVCGGLG 255 (257)
T ss_dssp HHHHHHHHHHHTSGGG-TTCCSCEEEESTTCC
T ss_pred HHHHHHHHHHHhCchh-cCCcCceEEECcCcc
Confidence 7899999998885332 222478888887743
|
| >d1zema1 c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconobacter oxydans [TaxId: 442]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Xylitol dehydrogenase species: Gluconobacter oxydans [TaxId: 442]
Probab=99.58 E-value=2e-14 Score=138.41 Aligned_cols=173 Identities=14% Similarity=0.162 Sum_probs=121.8
Q ss_pred cCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 010075 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (519)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (519)
++||+++||||++.||+++++.|++.| .+|++..|++.. .+.+.+++ ++ ...++..
T Consensus 3 L~gK~alITGas~GIG~aia~~la~~G---a~V~~~~r~~~~---l~~~~~~~---------~~---------~g~~~~~ 58 (260)
T d1zema1 3 FNGKVCLVTGAGGNIGLATALRLAEEG---TAIALLDMNREA---LEKAEASV---------RE---------KGVEARS 58 (260)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHTT---CEEEEEESCHHH---HHHHHHHH---------HT---------TTSCEEE
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCC---CEEEEEECCHHH---HHHHHHHH---------Hh---------cCCcEEE
Confidence 689999999999999999999999999 678888886422 22222111 11 1357889
Q ss_pred EeccCCCCCCCCChhhhHHHHhcCccEEEEcCccCC----c----cccHHHHHHHhHHHHHHHHHHHHh-c--cCCceEE
Q 010075 90 VPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITK----F----DERYDVAFGINTLGVIHLVNFAKK-C--VKLKVFV 158 (519)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~~~vdiViH~Aa~v~----f----~~~~~~~~~~Nv~gt~~ll~~a~~-~--~~l~~~V 158 (519)
+.+|+++++-.-...+.......++|++||+||... + .+.++..+++|+.|+..+.+.+.+ + ++-.++|
T Consensus 59 ~~~Dv~~~~~v~~~~~~~~~~~g~iDilVnnaG~~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~m~~~~~G~II 138 (260)
T d1zema1 59 YVCDVTSEEAVIGTVDSVVRDFGKIDFLFNNAGYQGAFAPVQDYPSDDFARVLTINVTGAFHVLKAVSRQMITQNYGRIV 138 (260)
T ss_dssp EECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEE
T ss_pred EEccCCCHHHHHHHHHHHHHHhCCCCeehhhhccccccCccccccHHHHHhhccccccccccchhhHHhhhhhhcCCCCC
Confidence 999999632100000011112347999999999653 2 256888899999999998887643 2 3557899
Q ss_pred EEecceeecCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcHHHHHHHHH
Q 010075 159 HVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMG 238 (519)
Q Consensus 159 ~vSTa~v~~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~Y~~sK~~a 238 (519)
++||....... +....|+.||+..
T Consensus 139 ~isS~~~~~~~--------------------------------------------------------~~~~~Y~asKaal 162 (260)
T d1zema1 139 NTASMAGVKGP--------------------------------------------------------PNMAAYGTSKGAI 162 (260)
T ss_dssp EECCHHHHSCC--------------------------------------------------------TTBHHHHHHHHHH
T ss_pred eeechhhccCC--------------------------------------------------------cchHHHHHHHHHH
Confidence 99997643211 1234799999999
Q ss_pred HHHHHHh-----hcCCcEEEEecCccccC
Q 010075 239 EMLMQQS-----KENLSLVIIRPTVVSGT 262 (519)
Q Consensus 239 E~lv~~~-----~~~lp~~IvRPs~V~g~ 262 (519)
+.+.+.. ..++.+..|-||.|-.+
T Consensus 163 ~~ltk~lA~el~~~gIrVN~I~PG~v~T~ 191 (260)
T d1zema1 163 IALTETAALDLAPYNIRVNAISPGYMGPG 191 (260)
T ss_dssp HHHHHHHHHHHGGGTEEEEEEEECSBCSS
T ss_pred HHHHHHHHHHhhhhCCEEEEeccCcccCc
Confidence 8888754 45799999999998765
|
| >d1gega_ c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Klebsiella pneumoniae [TaxId: 573]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: meso-2,3-butanediol dehydrogenase species: Klebsiella pneumoniae [TaxId: 573]
Probab=99.57 E-value=2.2e-14 Score=137.74 Aligned_cols=225 Identities=14% Similarity=0.069 Sum_probs=143.5
Q ss_pred CEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEEec
Q 010075 13 KTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVPG 92 (519)
Q Consensus 13 k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v~g 92 (519)
|.++||||++.||++++++|++.| .+|++..|+... .+.+.+++ ++. ..++.++.+
T Consensus 2 KValITGas~GIG~aia~~la~~G---a~V~~~~r~~~~---l~~~~~~i---------~~~---------g~~~~~~~~ 57 (255)
T d1gega_ 2 KVALVTGAGQGIGKAIALRLVKDG---FAVAIADYNDAT---AKAVASEI---------NQA---------GGHAVAVKV 57 (255)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTT---CEEEEEESCHHH---HHHHHHHH---------HHT---------TCCEEEEEC
T ss_pred CEEEEcCCccHHHHHHHHHHHHCC---CEEEEEECCHHH---HHHHHHHH---------Hhc---------CCcEEEEEe
Confidence 567999999999999999999999 678888886422 22222221 111 257889999
Q ss_pred cCCCCCCCCChhhhHHHH-------hcCccEEEEcCccCCc-------cccHHHHHHHhHHHHHHHHHHHHh-c---cCC
Q 010075 93 DISSEDLGLKDSNLKEEL-------WNELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKK-C---VKL 154 (519)
Q Consensus 93 Dl~~~~lgls~~~~~~~l-------~~~vdiViH~Aa~v~f-------~~~~~~~~~~Nv~gt~~ll~~a~~-~---~~l 154 (519)
|++++ +..+.+ ..++|++||+||.... .+.++..+++|+.|+..+.+.+.+ + ++-
T Consensus 58 Dv~~~-------~~v~~~~~~~~~~~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~~ 130 (255)
T d1gega_ 58 DVSDR-------DQVFAAVEQARKTLGGFDVIVNNAGVAPSTPIESITPEIVDKVYNINVKGVIWGIQAAVEAFKKEGHG 130 (255)
T ss_dssp CTTSH-------HHHHHHHHHHHHHTTCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSC
T ss_pred eCCCH-------HHHHHHHHHHHHHhCCccEEEecccccccCcHHHhhhhhhhhhhhhcccchhhhhhhhcchhhhhccc
Confidence 99963 222232 3479999999997542 256888999999999998877643 2 234
Q ss_pred ceEEEEecceeecCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcHHHHH
Q 010075 155 KVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFT 234 (519)
Q Consensus 155 ~~~V~vSTa~v~~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~Y~~s 234 (519)
.++|++||....... +....|+.|
T Consensus 131 g~Iv~isS~~~~~~~--------------------------------------------------------~~~~~Y~as 154 (255)
T d1gega_ 131 GKIINACSQAGHVGN--------------------------------------------------------PELAVYSSS 154 (255)
T ss_dssp EEEEEECCGGGTSCC--------------------------------------------------------TTBHHHHHH
T ss_pred cccccccchhhcccC--------------------------------------------------------cccccchhC
Confidence 679999987543211 223579999
Q ss_pred HHHHHHHHHHh-----hcCCcEEEEecCccccCCCCCCCcc-cccc-cccHHHHHHhhcCCceeeccCCCceeeeeeHHH
Q 010075 235 KTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGW-VEDL-KTINTLFVASAQGNLRCLVGETKVIMDVIPVDM 307 (519)
Q Consensus 235 K~~aE~lv~~~-----~~~lp~~IvRPs~V~g~~~~p~~gw-~~~~-~~~~~~i~~~~~g~~~~~~~~~~~~~d~vpVDd 307 (519)
|+..+.+.+.. ..++.+..+-||.|-.+........ .+.. .........+.+. ....-+...+|
T Consensus 155 Kaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~pl~R~~~pee 225 (255)
T d1gega_ 155 KFAVRGLTQTAARDLAPLGITVNGYCPGIVKTPMWAEIDRQVSEAAGKPLGYGTAEFAKR---------ITLGRLSEPED 225 (255)
T ss_dssp HHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSHHHHHHHHHHHHHHTCCTTHHHHHHHTT---------CTTCSCBCHHH
T ss_pred HHHHHhhHHHHHHHhhhhCcEEEEEecCcccChHHhhhhhhhHhhhcccchhHHHHHHhc---------CCCCCCcCHHH
Confidence 99998888754 5579999999998854321100000 0000 0000011111111 11122456899
Q ss_pred HHHHHHHHHHHhccCCCCCcEEEecCC
Q 010075 308 VVNAMIVAMVAHAKQPSDANIYHVGSS 334 (519)
Q Consensus 308 va~aii~a~~~~~~~~~~~~iyni~s~ 334 (519)
+|+++..++.... .--.+++..+.+|
T Consensus 226 vA~~v~fL~S~~a-~~itG~~i~vDGG 251 (255)
T d1gega_ 226 VAACVSYLASPDS-DYMTGQSLLIDGG 251 (255)
T ss_dssp HHHHHHHHHSGGG-TTCCSCEEEESSS
T ss_pred HHHHHHHHhCchh-CCccCcEEEecCC
Confidence 9999998886332 2224788888777
|
| >d1h5qa_ c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Agaricus bisporus) [TaxId: 5341]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Mannitol dehydrogenase species: Mushroom (Agaricus bisporus) [TaxId: 5341]
Probab=99.57 E-value=3.8e-14 Score=136.47 Aligned_cols=227 Identities=14% Similarity=0.154 Sum_probs=146.8
Q ss_pred cCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 010075 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (519)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (519)
|+||++|||||++.||+++++.|++.| .+|++..|+..... +..++ +.++. ..++..
T Consensus 7 l~gK~alITGas~GIG~aia~~la~~G---a~V~i~~r~~~~~~---~~~~~---------~~~~~--------g~~~~~ 63 (260)
T d1h5qa_ 7 FVNKTIIVTGGNRGIGLAFTRAVAAAG---ANVAVIYRSAADAV---EVTEK---------VGKEF--------GVKTKA 63 (260)
T ss_dssp CTTEEEEEETTTSHHHHHHHHHHHHTT---EEEEEEESSCTTHH---HHHHH---------HHHHH--------TCCEEE
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCC---CEEEEEECCHHHHH---HHHHH---------HHHHh--------CCceEE
Confidence 689999999999999999999999999 68899999865431 11111 11122 257889
Q ss_pred EeccCCCCCCCCChhhhHHHH-------hcCccEEEEcCccCCc-------cccHHHHHHHhHHHHHHHHHHHHh-c---
Q 010075 90 VPGDISSEDLGLKDSNLKEEL-------WNELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKK-C--- 151 (519)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l-------~~~vdiViH~Aa~v~f-------~~~~~~~~~~Nv~gt~~ll~~a~~-~--- 151 (519)
+.+|++++ +..+.+ ..++|++||+|+.... .+.++..+++|+.|+..+.+.+.+ +
T Consensus 64 ~~~Dv~~~-------~~v~~~~~~~~~~~g~iDilVnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~ 136 (260)
T d1h5qa_ 64 YQCDVSNT-------DIVTKTIQQIDADLGPISGLIANAGVSVVKPATELTHEDFAFVYDVNVFGVFNTCRAVAKLWLQK 136 (260)
T ss_dssp EECCTTCH-------HHHHHHHHHHHHHSCSEEEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH
T ss_pred EEccCCCH-------HHHHHHHHHHHHHhCCCcEecccccccccCCHHHhccccccccccccccchhhhhhhhccccccc
Confidence 99999963 222233 2469999999987532 256888999999999888776543 2
Q ss_pred cCCceEEEEecceeecCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcHH
Q 010075 152 VKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTY 231 (519)
Q Consensus 152 ~~l~~~V~vSTa~v~~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~Y 231 (519)
+.-..++.+|+.......... +. .......|
T Consensus 137 ~~~g~i~~~~s~~~~~~~~~~-----~~--------------------------------------------~~~~~~~Y 167 (260)
T d1h5qa_ 137 QQKGSIVVTSSMSSQIINQSS-----LN--------------------------------------------GSLTQVFY 167 (260)
T ss_dssp TCCEEEEEECCGGGTSCCEEE-----TT--------------------------------------------EECSCHHH
T ss_pred ccceEEEEeeccccccccccc-----cc--------------------------------------------cCccccch
Confidence 244566666665543221100 00 00223579
Q ss_pred HHHHHHHHHHHHHh-----hcCCcEEEEecCccccCCCCCCCcccccccccHHHHHHhhcCCceeeccCCCceeeeeeHH
Q 010075 232 VFTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVD 306 (519)
Q Consensus 232 ~~sK~~aE~lv~~~-----~~~lp~~IvRPs~V~g~~~~p~~gw~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~d~vpVD 306 (519)
+.||+..+.+.+.. ..++.+..|-||.|-.+..... ............ + ..-+.-.+
T Consensus 168 ~asKaal~~lt~~lA~el~~~gIrvN~I~PG~i~T~~~~~~---------~~~~~~~~~~~~----p-----l~R~g~pe 229 (260)
T d1h5qa_ 168 NSSKAACSNLVKGLAAEWASAGIRVNALSPGYVNTDQTAHM---------DKKIRDHQASNI----P-----LNRFAQPE 229 (260)
T ss_dssp HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCGGGGGS---------CHHHHHHHHHTC----T-----TSSCBCGG
T ss_pred hhhhhhHHHHHHHHHHHhchhCeEEeecCCCcccCcchhcc---------CHHHHHHHHhcC----C-----CCCCcCHH
Confidence 99999998887754 5679999999999865432111 112222222211 1 11134577
Q ss_pred HHHHHHHHHHHHhccCCCCCcEEEecCC
Q 010075 307 MVVNAMIVAMVAHAKQPSDANIYHVGSS 334 (519)
Q Consensus 307 dva~aii~a~~~~~~~~~~~~iyni~s~ 334 (519)
|+|++++.++.... .--.++++.+.+|
T Consensus 230 dvA~~v~fL~S~~s-~~itG~~i~VDGG 256 (260)
T d1h5qa_ 230 EMTGQAILLLSDHA-TYMTGGEYFIDGG 256 (260)
T ss_dssp GGHHHHHHHHSGGG-TTCCSCEEEECTT
T ss_pred HHHHHHHHHhcchh-CCCcCceEEECCC
Confidence 89999988875432 2224788888777
|
| >d1xkqa_ c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorhabditis elegans [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein R05D8.7 species: Caenorhabditis elegans [TaxId: 6239]
Probab=99.57 E-value=1.9e-14 Score=139.54 Aligned_cols=232 Identities=13% Similarity=0.156 Sum_probs=143.2
Q ss_pred cCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 010075 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (519)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (519)
++||+++||||++.||++++++|++.| .+|++..|+... .+.+.+++ ++.. ....++..
T Consensus 3 L~gK~alVTGas~GIG~aia~~la~~G---a~V~l~~r~~~~---l~~~~~~l---------~~~~------~~~~~~~~ 61 (272)
T d1xkqa_ 3 FSNKTVIITGSSNGIGRTTAILFAQEG---ANVTITGRSSER---LEETRQII---------LKSG------VSEKQVNS 61 (272)
T ss_dssp TTTCEEEETTCSSHHHHHHHHHHHHTT---CEEEEEESCHHH---HHHHHHHH---------HTTT------CCGGGEEE
T ss_pred CCCCEEEEeCcCcHHHHHHHHHHHHCC---CEEEEEECCHHH---HHHHHHHH---------HhcC------CCCCceEE
Confidence 689999999999999999999999999 688999886422 22222222 1111 01257899
Q ss_pred EeccCCCCCCCCChhhhHHHH-------hcCccEEEEcCccCCc--------c---ccHHHHHHHhHHHHHHHHHHHHhc
Q 010075 90 VPGDISSEDLGLKDSNLKEEL-------WNELDIMVNSAAITKF--------D---ERYDVAFGINTLGVIHLVNFAKKC 151 (519)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l-------~~~vdiViH~Aa~v~f--------~---~~~~~~~~~Nv~gt~~ll~~a~~~ 151 (519)
+.+|++++ +..+.+ ..++|++||+||.... + +.++..+++|+.|+..+.+.+...
T Consensus 62 ~~~Dvs~~-------~~v~~~~~~~~~~~g~iDilvnnAG~~~~~~~~~~~~d~~~~~~~~~~~vNl~~~~~~~~~~~p~ 134 (272)
T d1xkqa_ 62 VVADVTTE-------DGQDQIINSTLKQFGKIDVLVNNAGAAIPDAFGTTGTDQGIDIYHKTLKLNLQAVIEMTKKVKPH 134 (272)
T ss_dssp EECCTTSH-------HHHHHHHHHHHHHHSCCCEEEECCCCCCCCTTCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred EEccCCCH-------HHHHHHHHHHHHHhCCceEEEeCCcccCcccccccchhccHHHHHHHHHhhhhHHHHHHHhhccc
Confidence 99999963 222232 2479999999997532 1 137888999999999988876542
Q ss_pred --cCCceEEEEecc-eeecCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCC
Q 010075 152 --VKLKVFVHVSTA-YVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWP 228 (519)
Q Consensus 152 --~~l~~~V~vSTa-~v~~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~ 228 (519)
++-..+|.++|. ...... +..
T Consensus 135 m~~~~g~iI~~~Ss~a~~~~~--------------------------------------------------------~~~ 158 (272)
T d1xkqa_ 135 LVASKGEIVNVSSIVAGPQAQ--------------------------------------------------------PDF 158 (272)
T ss_dssp HHHHTCEEEEECCGGGSSSCC--------------------------------------------------------CSS
T ss_pred ccccCCccccccchhccccCC--------------------------------------------------------CCc
Confidence 122355555553 211110 123
Q ss_pred cHHHHHHHHHHHHHHHh-----hcCCcEEEEecCccccCCCCCCCcccccccccHHHHHHhhcCCceeeccCCCceeeee
Q 010075 229 NTYVFTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVI 303 (519)
Q Consensus 229 n~Y~~sK~~aE~lv~~~-----~~~lp~~IvRPs~V~g~~~~p~~gw~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~d~v 303 (519)
..|+.||+..+.+.+.. ..++.+..|-||.|-.+..+.....-............... ..+ ..-+.
T Consensus 159 ~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~----~~P-----lgR~g 229 (272)
T d1xkqa_ 159 LYYAIAKAALDQYTRSTAIDLAKFGIRVNSVSPGMVETGFTNAMGMPDQASQKFYNFMASHKE----CIP-----IGAAG 229 (272)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCBCSSHHHHTTCCHHHHHHHHHHHHHCTT----TCT-----TSSCB
T ss_pred chhhhHHHHHHHHHHHHHHHhcccCeEEEEEeeCCCcchhhhccCCchHHHHHHHHHHHHHhc----CCC-----CCCCc
Confidence 56999999988887754 56799999999998654321110000000000011111111 111 11245
Q ss_pred eHHHHHHHHHHHHHHhccCCCCCcEEEecCC
Q 010075 304 PVDMVVNAMIVAMVAHAKQPSDANIYHVGSS 334 (519)
Q Consensus 304 pVDdva~aii~a~~~~~~~~~~~~iyni~s~ 334 (519)
-.+|+|++++.++......--.++++.+.+|
T Consensus 230 ~pediA~~v~fL~S~~as~~iTG~~i~vDGG 260 (272)
T d1xkqa_ 230 KPEHIANIILFLADRNLSFYILGQSIVADGG 260 (272)
T ss_dssp CHHHHHHHHHHHHCHHHHTTCCSCEEEESTT
T ss_pred CHHHHHHHHHHHhCcchhCCccCeEEEeCcC
Confidence 6789999999888533222123788888877
|
| >d1edoa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Oil seed rape (Brassica napus) [TaxId: 3708]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Oil seed rape (Brassica napus) [TaxId: 3708]
Probab=99.55 E-value=2.8e-14 Score=136.05 Aligned_cols=218 Identities=14% Similarity=0.170 Sum_probs=142.9
Q ss_pred CEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEEec
Q 010075 13 KTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVPG 92 (519)
Q Consensus 13 k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v~g 92 (519)
+.|+||||++.||++++++|++.| .+|++..++.. ...+.+.+++ ++ . ..++.++.+
T Consensus 2 pV~lITGas~GIG~a~a~~la~~G---a~V~i~~~~~~--~~~~~~~~~~---------~~-~--------g~~~~~~~~ 58 (244)
T d1edoa_ 2 PVVVVTGASRGIGKAIALSLGKAG---CKVLVNYARSA--KAAEEVSKQI---------EA-Y--------GGQAITFGG 58 (244)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHTT---CEEEEEESSCH--HHHHHHHHHH---------HH-H--------TCEEEEEEC
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCC---CEEEEEeCCCH--HHHHHHHHHH---------HH-c--------CCcEEEEeC
Confidence 479999999999999999999999 67777654332 1122222111 11 1 357889999
Q ss_pred cCCCCCCCCChhhhHHHH-------hcCccEEEEcCccCCc-------cccHHHHHHHhHHHHHHHHHHHHh-c--cCCc
Q 010075 93 DISSEDLGLKDSNLKEEL-------WNELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKK-C--VKLK 155 (519)
Q Consensus 93 Dl~~~~lgls~~~~~~~l-------~~~vdiViH~Aa~v~f-------~~~~~~~~~~Nv~gt~~ll~~a~~-~--~~l~ 155 (519)
|++++ +..+.+ ..++|++||+|+.... .+.++..+++|+.|+..+.+.+.+ | ++-.
T Consensus 59 Dv~~~-------~~v~~~~~~~~~~~g~iDiLVnnAg~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G 131 (244)
T d1edoa_ 59 DVSKE-------ADVEAMMKTAIDAWGTIDVVVNNAGITRDTLLIRMKKSQWDEVIDLNLTGVFLCTQAATKIMMKKRKG 131 (244)
T ss_dssp CTTSH-------HHHHHHHHHHHHHSSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCE
T ss_pred CCCCH-------HHHHHHHHHHHHHcCCCCccccccccccccchhccchHHHHHHHhhhhhhHHHHHHHHHHHHHHcCCc
Confidence 99963 222232 2479999999997643 267889999999999988887644 2 3557
Q ss_pred eEEEEecceeecCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcHHHHHH
Q 010075 156 VFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTK 235 (519)
Q Consensus 156 ~~V~vSTa~v~~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~Y~~sK 235 (519)
++|++||....... .....|+.||
T Consensus 132 ~IVnisS~~~~~~~--------------------------------------------------------~~~~~Y~asK 155 (244)
T d1edoa_ 132 RIINIASVVGLIGN--------------------------------------------------------IGQANYAAAK 155 (244)
T ss_dssp EEEEECCTHHHHCC--------------------------------------------------------TTCHHHHHHH
T ss_pred EEEEEcChhhcCCC--------------------------------------------------------CCCHHHHHHH
Confidence 99999997643211 1235799999
Q ss_pred HHHHHHHHHh-----hcCCcEEEEecCccccCCCCCCCcccccccccHHHHHHhhcCCceeeccCCCceeeeeeHHHHHH
Q 010075 236 TMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVN 310 (519)
Q Consensus 236 ~~aE~lv~~~-----~~~lp~~IvRPs~V~g~~~~p~~gw~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~d~vpVDdva~ 310 (519)
+..+.+.+.. ..++.+..+-||.|-.+..+.. ............ ...-+...+|+|+
T Consensus 156 aal~~ltk~lA~el~~~gIrvN~I~PG~i~T~~~~~~---------~~~~~~~~~~~~---------pl~R~~~p~dvA~ 217 (244)
T d1edoa_ 156 AGVIGFSKTAAREGASRNINVNVVCPGFIASDMTAKL---------GEDMEKKILGTI---------PLGRTGQPENVAG 217 (244)
T ss_dssp HHHHHHHHHHHHHHHTTTEEEEEEEECSBCSHHHHTT---------CHHHHHHHHTSC---------TTCSCBCHHHHHH
T ss_pred HHHHHChHHHHHHHhhhCcEEEEEecceeccHHHHHh---------hHHHHHHHHhcC---------CCCCCcCHHHHHH
Confidence 9998888754 4579999999998865422111 111122211111 1112456799999
Q ss_pred HHHHHHHHhccCCCCCcEEEecCC
Q 010075 311 AMIVAMVAHAKQPSDANIYHVGSS 334 (519)
Q Consensus 311 aii~a~~~~~~~~~~~~iyni~s~ 334 (519)
++..++..+...--.+++..+.+|
T Consensus 218 ~v~fLa~S~~a~~itG~~i~vdGG 241 (244)
T d1edoa_ 218 LVEFLALSPAASYITGQAFTIDGG 241 (244)
T ss_dssp HHHHHHHCSGGGGCCSCEEEESTT
T ss_pred HHHHHHCCchhcCCcCCeEEeCCC
Confidence 998876433222223678888777
|
| >d1ulua_ c.2.1.2 (A:) Enoyl-ACP reductase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Thermus thermophilus [TaxId: 274]
Probab=99.55 E-value=7.2e-14 Score=134.09 Aligned_cols=220 Identities=16% Similarity=0.176 Sum_probs=141.6
Q ss_pred cCCCEEEEeCCcc--HHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCce
Q 010075 10 LENKTILVSGVTG--FVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKI 87 (519)
Q Consensus 10 ~~~k~VlITGaTG--FlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v 87 (519)
++||+++|||||| .||++++++|++.| .+|++..|+.+.....+++. .. ..+.
T Consensus 6 L~gK~alITGas~~~GIG~aiA~~la~~G---a~V~i~~~~~~~~~~~~~~~-------------~~---------~~~~ 60 (256)
T d1ulua_ 6 LSGKKALVMGVTNQRSLGFAIAAKLKEAG---AEVALSYQAERLRPEAEKLA-------------EA---------LGGA 60 (256)
T ss_dssp CTTCEEEEESCCCSSSHHHHHHHHHHHTT---CEEEEEESSGGGHHHHHHHH-------------HH---------TTCC
T ss_pred CCCCEEEEECCCCCchHHHHHHHHHHHCC---CEEEEEeCcHHHHHHHHHhh-------------hc---------cCcc
Confidence 6899999999998 79999999999999 67777777643222222111 11 2456
Q ss_pred EEEeccCCCCCCCCChhhhHHHH-------hcCccEEEEcCccCC-------c----cccHHHHHHHhHHHHHHHHHHHH
Q 010075 88 TFVPGDISSEDLGLKDSNLKEEL-------WNELDIMVNSAAITK-------F----DERYDVAFGINTLGVIHLVNFAK 149 (519)
Q Consensus 88 ~~v~gDl~~~~lgls~~~~~~~l-------~~~vdiViH~Aa~v~-------f----~~~~~~~~~~Nv~gt~~ll~~a~ 149 (519)
.++.+|+++++ + .+.+ ..++|++||+|+... + .+.+...+++|+.++..+.+.+.
T Consensus 61 ~~~~~D~~~~~------~-v~~~~~~~~~~~g~iDilVnnag~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~ 133 (256)
T d1ulua_ 61 LLFRADVTQDE------E-LDALFAGVKEAFGGLDYLVHAIAFAPREAMEGRYIDTRRQDWLLALEVSAYSLVAVARRAE 133 (256)
T ss_dssp EEEECCTTCHH------H-HHHHHHHHHHHHSSEEEEEECCCCCCHHHHSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHT
T ss_pred cccccccCCHH------H-HHHHHHHHHHhcCCceEEEeccccccccccccchhhhhhhhhhHhhhhhHHHHHHHHHHHH
Confidence 78999999632 2 2233 347999999998642 1 13567789999999999988876
Q ss_pred hc-cCCceEEEEecceeecCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCC
Q 010075 150 KC-VKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWP 228 (519)
Q Consensus 150 ~~-~~l~~~V~vSTa~v~~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~ 228 (519)
.. ++-.++|++||....... +..
T Consensus 134 ~~~~~~G~Iv~isS~~~~~~~--------------------------------------------------------~~~ 157 (256)
T d1ulua_ 134 PLLREGGGIVTLTYYASEKVV--------------------------------------------------------PKY 157 (256)
T ss_dssp TTEEEEEEEEEEECGGGTSBC--------------------------------------------------------TTC
T ss_pred HHhccCCEEEEEeehHhcCCC--------------------------------------------------------CCc
Confidence 43 233579999987653211 224
Q ss_pred cHHHHHHHHHHHHHHHh-----hcCCcEEEEecCccccCCCCCCCcccccccccHHHHHHhhcCCceeeccCCCceeeee
Q 010075 229 NTYVFTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVI 303 (519)
Q Consensus 229 n~Y~~sK~~aE~lv~~~-----~~~lp~~IvRPs~V~g~~~~p~~gw~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~d~v 303 (519)
..|+.||+..+.+.+.. ..++.+..+.||.|..+.....+. .........+.. + ..-+.
T Consensus 158 ~~Y~asKaal~~ltr~lA~ela~~gIrVN~I~PG~i~t~~~~~~~~-------~~~~~~~~~~~~----p-----l~R~~ 221 (256)
T d1ulua_ 158 NVMAIAKAALEASVRYLAYELGPKGVRVNAISAGPVRTVAARSIPG-------FTKMYDRVAQTA----P-----LRRNI 221 (256)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCC-----------------CHHHHHHHHHHS----T-----TSSCC
T ss_pred hHHHHHHHHHHHHHHHHHHHhcccCCEEeeeccceeeeccccchhh-------hHHHHHHHHhcC----C-----CCCCc
Confidence 57999999999888754 558999999999987654432211 111222221111 1 11135
Q ss_pred eHHHHHHHHHHHHHHhccCCCCCcEEEecCC
Q 010075 304 PVDMVVNAMIVAMVAHAKQPSDANIYHVGSS 334 (519)
Q Consensus 304 pVDdva~aii~a~~~~~~~~~~~~iyni~s~ 334 (519)
..+|+|++++.++.... .--.++++.+.+|
T Consensus 222 ~pedvA~~v~fL~S~~s-~~itG~~i~VDGG 251 (256)
T d1ulua_ 222 TQEEVGNLGLFLLSPLA-SGITGEVVYVDAG 251 (256)
T ss_dssp CHHHHHHHHHHHHSGGG-TTCCSCEEEESTT
T ss_pred CHHHHHHHHHHHhCchh-CCccCCeEEECcC
Confidence 57899999998886433 2224678888776
|
| >d1xg5a_ c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC4172) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Putative dehydrogenase ARPG836 (MGC4172) species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.55 E-value=3.7e-14 Score=136.29 Aligned_cols=210 Identities=16% Similarity=0.158 Sum_probs=137.4
Q ss_pred hhcCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCce
Q 010075 8 EFLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKI 87 (519)
Q Consensus 8 ~~~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v 87 (519)
+.++||++|||||++.||++++++|++.| .+|++..|+.. ..+++.++ ++++.+ ..++
T Consensus 6 ~~lk~Kv~lITGas~GIG~aiA~~la~~G---~~Vv~~~r~~~---~l~~~~~~---------l~~~~~-------~~~~ 63 (257)
T d1xg5a_ 6 ERWRDRLALVTGASGGIGAAVARALVQQG---LKVVGCARTVG---NIEELAAE---------CKSAGY-------PGTL 63 (257)
T ss_dssp GGGTTCEEEEESTTSHHHHHHHHHHHHTT---CEEEEEESCHH---HHHHHHHH---------HHHTTC-------SSEE
T ss_pred CCCCCCEEEEeCCCCHHHHHHHHHHHHCC---CEEEEEECCHH---HHHHHHHH---------HHhcCC-------CceE
Confidence 45899999999999999999999999999 67888888632 22333222 222211 3578
Q ss_pred EEEeccCCCCCCCCChhhhHHHH-------hcCccEEEEcCccCCc-------cccHHHHHHHhHHHHHHHHHHHHh---
Q 010075 88 TFVPGDISSEDLGLKDSNLKEEL-------WNELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKK--- 150 (519)
Q Consensus 88 ~~v~gDl~~~~lgls~~~~~~~l-------~~~vdiViH~Aa~v~f-------~~~~~~~~~~Nv~gt~~ll~~a~~--- 150 (519)
.++.+|++++ ++ .+.+ ..++|++||+|+.... .+.++..+++|+.|+..+.+.+.+
T Consensus 64 ~~~~~Dls~~------~~-v~~~v~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~~~ 136 (257)
T d1xg5a_ 64 IPYRCDLSNE------ED-ILSMFSAIRSQHSGVDICINNAGLARPDTLLSGSTSGWKDMFNVNVLALSICTREAYQSMK 136 (257)
T ss_dssp EEEECCTTCH------HH-HHHHHHHHHHHHCCCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHH
T ss_pred EEEEccCCCH------HH-HHHHHHHHHHhcCCCCEEEecccccCCCccccccHHHHHhhhhhhhhHHHHHHHHHHHHHH
Confidence 9999999963 22 2232 3469999999998643 367889999999999888776533
Q ss_pred -cc-CCceEEEEecceeecCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCC
Q 010075 151 -CV-KLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWP 228 (519)
Q Consensus 151 -~~-~l~~~V~vSTa~v~~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~ 228 (519)
.+ +-.++|++||........ + ...
T Consensus 137 ~~~~~~g~Ii~isS~~~~~~~p-------~-----------------------------------------------~~~ 162 (257)
T d1xg5a_ 137 ERNVDDGHIININSMSGHRVLP-------L-----------------------------------------------SVT 162 (257)
T ss_dssp HTTCCSCEEEEECCGGGTSCCS-------C-----------------------------------------------GGG
T ss_pred HhccCCCceEEEechHhcCCCC-------C-----------------------------------------------ccc
Confidence 11 246899999976432110 0 112
Q ss_pred cHHHHHHHHHHHHHHHh-------hcCCcEEEEecCccccCCCCCCCcccccccccHHHHHHhhcCCceeeccCCCceee
Q 010075 229 NTYVFTKTMGEMLMQQS-------KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMD 301 (519)
Q Consensus 229 n~Y~~sK~~aE~lv~~~-------~~~lp~~IvRPs~V~g~~~~p~~gw~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~d 301 (519)
..|+.+|+..+.+.+.. ..++.+..+-||.+-.+.....+ + .......... ....
T Consensus 163 ~~Y~~sKaal~~ltr~la~el~~~~~~I~vn~i~PG~i~t~~~~~~~---~--~~~~~~~~~~-------------~~~r 224 (257)
T d1xg5a_ 163 HFYSATKYAVTALTEGLRQELREAQTHIRATCISPGVVETQFAFKLH---D--KDPEKAAATY-------------EQMK 224 (257)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTTCCCEEEEEEESCBCSSHHHHHT---T--TCHHHHHHHH-------------C---
T ss_pred HHHHHHHHHHHhCHHHHHHHHHhCCCCEEEEEEeCCCCCChhhhhcC---h--hhHHHHHhcC-------------CCCC
Confidence 35999999998887643 35799999999987654321110 0 0011111111 1122
Q ss_pred eeeHHHHHHHHHHHHHH
Q 010075 302 VIPVDMVVNAMIVAMVA 318 (519)
Q Consensus 302 ~vpVDdva~aii~a~~~ 318 (519)
++-.+|||++++.++..
T Consensus 225 ~~~pedvA~~v~fL~s~ 241 (257)
T d1xg5a_ 225 CLKPEDVAEAVIYVLST 241 (257)
T ss_dssp CBCHHHHHHHHHHHHHS
T ss_pred CcCHHHHHHHHHHHhCC
Confidence 45688999999988864
|
| >d2fr1a1 c.2.1.2 (A:1657-1915) Erythromycin synthase, eryAI, 1st ketoreductase module {Saccharopolyspora erythraea [TaxId: 1836]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Erythromycin synthase, eryAI, 1st ketoreductase module species: Saccharopolyspora erythraea [TaxId: 1836]
Probab=99.54 E-value=6.3e-14 Score=134.63 Aligned_cols=205 Identities=20% Similarity=0.180 Sum_probs=140.4
Q ss_pred hhcCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCce
Q 010075 8 EFLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKI 87 (519)
Q Consensus 8 ~~~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v 87 (519)
.|-.+++|+||||+|.||+++++.|+++|. ..|+++.|+....+..+++.+++ ++ ...++
T Consensus 5 ~~~p~gt~lVTGgs~GIG~a~a~~la~~Ga--~~vvl~~R~~~~~~~~~~~~~~l---------~~---------~g~~v 64 (259)
T d2fr1a1 5 EWKPTGTVLVTGGTGGVGGQIARWLARRGA--PHLLLVSRSGPDADGAGELVAEL---------EA---------LGART 64 (259)
T ss_dssp CCCCCSEEEEETTTSHHHHHHHHHHHHHTC--SEEEEEESSGGGSTTHHHHHHHH---------HH---------TTCEE
T ss_pred ccCCcCEEEEECCCcHHHHHHHHHHHHCCC--CEEEEEeCCccCHHHHHHHHHHH---------Hh---------ccccc
Confidence 466788999999999999999999999984 36788888754443333333222 11 13578
Q ss_pred EEEeccCCCCCCCCChhhhHHHHhc------CccEEEEcCccCCc-------cccHHHHHHHhHHHHHHHHHHHHhccCC
Q 010075 88 TFVPGDISSEDLGLKDSNLKEELWN------ELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKCVKL 154 (519)
Q Consensus 88 ~~v~gDl~~~~lgls~~~~~~~l~~------~vdiViH~Aa~v~f-------~~~~~~~~~~Nv~gt~~ll~~a~~~~~l 154 (519)
.++.+|++++ +..+.+.+ .+|.|||+|+.... .+.++..+.+|+.|+.++.++.... +.
T Consensus 65 ~~~~~Dv~d~-------~~~~~~~~~i~~~~~i~~vv~~ag~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~~~~~-~~ 136 (259)
T d2fr1a1 65 TVAACDVTDR-------ESVRELLGGIGDDVPLSAVFHAAATLDDGTVDTLTGERIERASRAKVLGARNLHELTREL-DL 136 (259)
T ss_dssp EEEECCTTCH-------HHHHHHHHTSCTTSCEEEEEECCCCCCCCCGGGCCHHHHHHHTHHHHHHHHHHHHHHTTS-CC
T ss_pred cccccccchH-------HHHHHhhccccccccccccccccccccccccccccHHHHHHHhhhhccchhHHHHHhhcc-CC
Confidence 9999999963 33334432 48999999998643 2456777899999999999988764 66
Q ss_pred ceEEEEecceeecCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcHHHHH
Q 010075 155 KVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFT 234 (519)
Q Consensus 155 ~~~V~vSTa~v~~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~Y~~s 234 (519)
.++|++||....-.. .....|+.+
T Consensus 137 ~~iv~~SS~a~~~g~--------------------------------------------------------~~~~~YaAa 160 (259)
T d2fr1a1 137 TAFVLFSSFASAFGA--------------------------------------------------------PGLGGYAPG 160 (259)
T ss_dssp SEEEEEEEHHHHTCC--------------------------------------------------------TTCTTTHHH
T ss_pred ceEeeecchhhccCC--------------------------------------------------------cccHHHHHH
Confidence 789999997654221 112359999
Q ss_pred HHHHHHHHHHh-hcCCcEEEEecCccccCCCCCCCcccccccccHHHHHHhhcCCceeeccCCCceeeeeeHHHHHHHHH
Q 010075 235 KTMGEMLMQQS-KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMI 313 (519)
Q Consensus 235 K~~aE~lv~~~-~~~lp~~IvRPs~V~g~~~~p~~gw~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~d~vpVDdva~aii 313 (519)
|+..+.+.++. ..+++++.|.||.+.++.. .+. .+.. . +-.. -...++.+++++++.
T Consensus 161 ka~l~~la~~~~~~Gi~v~~I~pg~~~~~g~------~~~------~~~~----~---~~~~---G~~~~~~~~~~~~l~ 218 (259)
T d2fr1a1 161 NAYLDGLAQQRRSDGLPATAVAWGTWAGSGM------AEG------PVAD----R---FRRH---GVIEMPPETACRALQ 218 (259)
T ss_dssp HHHHHHHHHHHHHTTCCCEEEEECCBC-------------------------------CTTT---TEECBCHHHHHHHHH
T ss_pred HHhHHHHHHHHHhCCCCEEECCCCcccCCcc------ccc------hHHH----H---HHhc---CCCCCCHHHHHHHHH
Confidence 99999998877 6789999999998765422 111 0000 0 0001 123578999999988
Q ss_pred HHHHH
Q 010075 314 VAMVA 318 (519)
Q Consensus 314 ~a~~~ 318 (519)
.++..
T Consensus 219 ~~l~~ 223 (259)
T d2fr1a1 219 NALDR 223 (259)
T ss_dssp HHHHT
T ss_pred HHHhC
Confidence 88764
|
| >d1g0oa_ c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]
Probab=99.54 E-value=2.6e-13 Score=131.41 Aligned_cols=242 Identities=13% Similarity=0.099 Sum_probs=149.5
Q ss_pred hhhhcCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCC
Q 010075 6 VVEFLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISE 85 (519)
Q Consensus 6 i~~~~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~ 85 (519)
-+.-++||++|||||||.||+++++.|++.| .+|++..|+... ..+.+.++ +++. ..
T Consensus 12 ~~~sL~gK~~lITGas~GIG~aia~~la~~G---a~Vvi~~~~~~~--~~~~~~~~---------~~~~---------g~ 68 (272)
T d1g0oa_ 12 QSASLEGKVALVTGAGRGIGREMAMELGRRG---CKVIVNYANSTE--SAEEVVAA---------IKKN---------GS 68 (272)
T ss_dssp GGGCCTTCEEEETTTTSHHHHHHHHHHHHTT---CEEEEEESSCHH--HHHHHHHH---------HHHT---------TC
T ss_pred CCcCCCCCEEEEeCCCCHHHHHHHHHHHHcC---CEEEEEeCCchH--HHHHHHHH---------HHhh---------CC
Confidence 3455899999999999999999999999999 677887776432 12222211 1111 25
Q ss_pred ceEEEeccCCCCCCCCChhhhHHHHhcCccEEEEcCccCCc-------cccHHHHHHHhHHHHHHHHHHHHh-ccCCceE
Q 010075 86 KITFVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKK-CVKLKVF 157 (519)
Q Consensus 86 ~v~~v~gDl~~~~lgls~~~~~~~l~~~vdiViH~Aa~v~f-------~~~~~~~~~~Nv~gt~~ll~~a~~-~~~l~~~ 157 (519)
++.++.+|+++++---...+...+....+|+++|+|+.... .+.++..+++|+.|+..+.+.+.. +.+-.+.
T Consensus 69 ~~~~~~~D~~~~~~v~~~~~~~~~~~g~idilV~nag~~~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~m~~~g~~ 148 (272)
T d1g0oa_ 69 DAACVKANVGVVEDIVRMFEEAVKIFGKLDIVCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFVAREAYKHLEIGGRL 148 (272)
T ss_dssp CEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSCTTCEE
T ss_pred ceeeEeCCCCCHHHHHHHHHHHHHHhCCCCccccccccchhhhhhhhhhhHHHHHhhhccceeeeecccccccccccccc
Confidence 68899999996321000011111223479999999998643 256788899999999999988764 3344577
Q ss_pred EEEecceeecCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcHHHHHHHH
Q 010075 158 VHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTM 237 (519)
Q Consensus 158 V~vSTa~v~~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~Y~~sK~~ 237 (519)
+.++|....... ......|+.||+.
T Consensus 149 i~i~s~~~~~~~-------------------------------------------------------~~~~~~Y~asKaa 173 (272)
T d1g0oa_ 149 ILMGSITGQAKA-------------------------------------------------------VPKHAVYSGSKGA 173 (272)
T ss_dssp EEECCGGGTCSS-------------------------------------------------------CSSCHHHHHHHHH
T ss_pred cccccccccccc-------------------------------------------------------ccchhhHHHHHHH
Confidence 777775432110 0234569999999
Q ss_pred HHHHHHHh-----hcCCcEEEEecCccccCCCCCC-Ccccccc-c-ccHHHHH-HhhcCCceeeccCCCceeeeeeHHHH
Q 010075 238 GEMLMQQS-----KENLSLVIIRPTVVSGTYKEPF-PGWVEDL-K-TINTLFV-ASAQGNLRCLVGETKVIMDVIPVDMV 308 (519)
Q Consensus 238 aE~lv~~~-----~~~lp~~IvRPs~V~g~~~~p~-~gw~~~~-~-~~~~~i~-~~~~g~~~~~~~~~~~~~d~vpVDdv 308 (519)
.+.+++.. ..++++..|.||.|-.+..... ..+.... . ....... ..... . ...-+.-.+||
T Consensus 174 l~~ltk~lA~e~~~~gIrVN~I~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~-----PlgR~~~peev 244 (272)
T d1g0oa_ 174 IETFARCMAIDMADKKITVNVVAPGGIKTDMYHAVCREYIPNGENLSNEEVDEYAAVQW----S-----PLRRVGLPIDI 244 (272)
T ss_dssp HHHHHHHHHHHHGGGTCEEEEEEECCBSSHHHHHHGGGGSTTCTTCCHHHHHHHHHHHS----C-----TTCSCBCHHHH
T ss_pred HHHHHHHHHHHhchhCeEEEEEccCCcCChHHHHHHHhhhhcccccchHHHHHHHHHcc----C-----CCCCCcCHHHH
Confidence 98888754 4689999999999865421100 0000000 0 0001110 01111 0 11124667999
Q ss_pred HHHHHHHHHHhccCCCCCcEEEecCCC
Q 010075 309 VNAMIVAMVAHAKQPSDANIYHVGSSL 335 (519)
Q Consensus 309 a~aii~a~~~~~~~~~~~~iyni~s~~ 335 (519)
|++++.++.... .--.+++..+.+|.
T Consensus 245 A~~v~fL~s~~s-~~itG~~i~vDGG~ 270 (272)
T d1g0oa_ 245 ARVVCFLASNDG-GWVTGKVIGIDGGA 270 (272)
T ss_dssp HHHHHHHHSGGG-TTCCSCEEEESTTC
T ss_pred HHHHHHHhCchh-cCccCceEeECCCC
Confidence 999999886433 22246788887763
|
| >d1gz6a_ c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=99.53 E-value=2.9e-14 Score=140.24 Aligned_cols=214 Identities=16% Similarity=0.173 Sum_probs=140.8
Q ss_pred cCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCc------ccHHHHHHHHHhhhhhHHHHHhhhcccccccc
Q 010075 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADI------DSAALRFQNEVLAKDVFNVLKEKWGTRLNSFI 83 (519)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~------~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~ 83 (519)
++||+++||||++.||++++++|++.| .+|++..|+... ....+++.+++
T Consensus 5 l~gKvalITGas~GIG~aiA~~la~~G---a~Vvi~d~~~~~~~~~~~~~~~~~~~~~~--------------------- 60 (302)
T d1gz6a_ 5 FDGRVVLVTGAGGGLGRAYALAFAERG---ALVVVNDLGGDFKGVGKGSSAADKVVEEI--------------------- 60 (302)
T ss_dssp CTTCEEEETTTTSHHHHHHHHHHHHTT---CEEEEECCCBCTTSCBCCSHHHHHHHHHH---------------------
T ss_pred cCCCEEEEeCCCCHHHHHHHHHHHHcC---CEEEEEeCCchhhhhhhhHHHHHHHHHHH---------------------
Confidence 689999999999999999999999999 677887775432 22223322111
Q ss_pred CCceEEEeccCCCCCCCCChhhhHHH---HhcCccEEEEcCccCCc-------cccHHHHHHHhHHHHHHHHHHHHh-c-
Q 010075 84 SEKITFVPGDISSEDLGLKDSNLKEE---LWNELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKK-C- 151 (519)
Q Consensus 84 ~~~v~~v~gDl~~~~lgls~~~~~~~---l~~~vdiViH~Aa~v~f-------~~~~~~~~~~Nv~gt~~ll~~a~~-~- 151 (519)
..+...+.+|+.+.+- .++..+. ...++|++||+||.... .+.++..+++|+.|+..+.+.+.. +
T Consensus 61 ~~~~~~~~~d~~~~~~---~~~~v~~~~~~~G~iDiLVnNAGi~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~ 137 (302)
T d1gz6a_ 61 RRRGGKAVANYDSVEA---GEKLVKTALDTFGRIDVVVNNAGILRDRSFSRISDEDWDIIQRVHLRGSFQVTRAAWDHMK 137 (302)
T ss_dssp HHTTCEEEEECCCGGG---HHHHHHHHHHHTSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hhcccccccccchHHH---HHHHHHHHHHHcCCCCEEEECCccCCCCChhhCCHHHHhhhhceeehhhHHHHHHhHHHHH
Confidence 1223445667775321 1222222 23479999999998643 257889999999999998887643 2
Q ss_pred -cCCceEEEEecceeecCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcH
Q 010075 152 -VKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNT 230 (519)
Q Consensus 152 -~~l~~~V~vSTa~v~~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~ 230 (519)
++-.++|++||....... .....
T Consensus 138 ~~~~G~IV~isS~~~~~~~--------------------------------------------------------~~~~~ 161 (302)
T d1gz6a_ 138 KQNYGRIIMTASASGIYGN--------------------------------------------------------FGQAN 161 (302)
T ss_dssp HHTCEEEEEECCHHHHHCC--------------------------------------------------------TTCHH
T ss_pred hCCCcEEEEeCChhhcCCC--------------------------------------------------------CCcHH
Confidence 245699999997543211 12357
Q ss_pred HHHHHHHHHHHHHHh-----hcCCcEEEEecCccccCCCCCCCcccccccccHHHHHHhhcCCceeeccCCCceeeeeeH
Q 010075 231 YVFTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPV 305 (519)
Q Consensus 231 Y~~sK~~aE~lv~~~-----~~~lp~~IvRPs~V~g~~~~p~~gw~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~d~vpV 305 (519)
|+.||+..+.+.+.. ..++.+..+-||.+........ +..+ ...+..
T Consensus 162 Y~asKaal~~lt~~la~E~~~~gIrVN~I~PG~~~t~~~~~~---------~~~~-------------------~~~~~P 213 (302)
T d1gz6a_ 162 YSAAKLGLLGLANTLVIEGRKNNIHCNTIAPNAGSRMTETVM---------PEDL-------------------VEALKP 213 (302)
T ss_dssp HHHHHHHHHHHHHHHHHHTGGGTEEEEEEEEECCSTTTGGGS---------CHHH-------------------HHHSCG
T ss_pred HHHHHHHHHHHHHHHHHHHhccCCceeeeCCCCCCcchhhcC---------cHhh-------------------HhcCCH
Confidence 999999988887754 5679999999987644322111 1111 112335
Q ss_pred HHHHHHHHHHHHHhccCCCCCcEEEecCCCC
Q 010075 306 DMVVNAMIVAMVAHAKQPSDANIYHVGSSLR 336 (519)
Q Consensus 306 Ddva~aii~a~~~~~~~~~~~~iyni~s~~~ 336 (519)
+|||++++.++... . .-.++++++.+|-.
T Consensus 214 edvA~~v~fL~S~~-a-~itG~~i~vdGG~~ 242 (302)
T d1gz6a_ 214 EYVAPLVLWLCHES-C-EENGGLFEVGAGWI 242 (302)
T ss_dssp GGTHHHHHHHTSTT-C-CCCSCEEEEETTEE
T ss_pred HHHHHHHHHHcCCC-c-CCCCcEEEeCCCce
Confidence 78999998887532 2 23478888887743
|
| >d2a4ka1 c.2.1.2 (A:2-242) beta-keto acyl carrier protein reductase {Thermus thermophilus, TTHB020 [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Thermus thermophilus, TTHB020 [TaxId: 274]
Probab=99.52 E-value=5.8e-14 Score=133.58 Aligned_cols=215 Identities=13% Similarity=0.111 Sum_probs=143.1
Q ss_pred cCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 010075 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (519)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (519)
++||+++|||||+.||+.++++|++.| .+|++..|+... .+++. ++ ...++.+
T Consensus 3 l~gK~alItGas~GIG~aia~~l~~~G---~~V~~~~r~~~~---~~~~~-------------~~--------~~~~~~~ 55 (241)
T d2a4ka1 3 LSGKTILVTGAASGIGRAALDLFAREG---ASLVAVDREERL---LAEAV-------------AA--------LEAEAIA 55 (241)
T ss_dssp TTTCEEEEESTTSHHHHHHHHHHHHTT---CEEEEEESCHHH---HHHHH-------------HT--------CCSSEEE
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCC---CEEEEEECCHHH---HHHHH-------------HH--------cCCceEE
Confidence 689999999999999999999999999 688998887421 11111 11 1367889
Q ss_pred EeccCCCCCCCCChhhhHHHH-------hcCccEEEEcCccCCc-------cccHHHHHHHhHHHHHHHHHHHHhc-cCC
Q 010075 90 VPGDISSEDLGLKDSNLKEEL-------WNELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKC-VKL 154 (519)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l-------~~~vdiViH~Aa~v~f-------~~~~~~~~~~Nv~gt~~ll~~a~~~-~~l 154 (519)
+++|+++++ ..+.+ ..++|++||+|+.... .+.++..+++|+.++..+.+.+... .+-
T Consensus 56 ~~~Dls~~~-------~i~~~~~~i~~~~g~iDiLinnAg~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~k~~~~~~~~~ 128 (241)
T d2a4ka1 56 VVADVSDPK-------AVEAVFAEALEEFGRLHGVAHFAGVAHSALSWNLPLEAWEKVLRVNLTGSFLVARKAGEVLEEG 128 (241)
T ss_dssp EECCTTSHH-------HHHHHHHHHHHHHSCCCEEEEGGGGTTTTC----CHHHHHHHHHHHHHHHHHHHHHHHHHCCTT
T ss_pred EEecCCCHH-------HHHHHHHHHHHHhCCccEeccccccccccchhhhhccccccccccccccccccccccccccccc
Confidence 999999632 22232 2469999999987532 2567888999999999999887553 333
Q ss_pred ceEEEEecceeecCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcHHHHH
Q 010075 155 KVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFT 234 (519)
Q Consensus 155 ~~~V~vSTa~v~~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~Y~~s 234 (519)
+.++.+||.+.... +....|+.+
T Consensus 129 ~~i~~~ss~a~~~~---------------------------------------------------------~~~~~Y~~s 151 (241)
T d2a4ka1 129 GSLVLTGSVAGLGA---------------------------------------------------------FGLAHYAAG 151 (241)
T ss_dssp CEEEEECCCTTCCH---------------------------------------------------------HHHHHHHHC
T ss_pred cceeeccccccccc---------------------------------------------------------cCccccchh
Confidence 44555555432110 012469999
Q ss_pred HHHHHHHHHHh-----hcCCcEEEEecCccccCCCCCCCcccccccccHHHHHHhhcCCceeeccCCCceeeeeeHHHHH
Q 010075 235 KTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVV 309 (519)
Q Consensus 235 K~~aE~lv~~~-----~~~lp~~IvRPs~V~g~~~~p~~gw~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~d~vpVDdva 309 (519)
|+..|.+.+.. ..++.+..+-||.|-.+..+.. +........+.. + ..-+.-.||+|
T Consensus 152 K~al~~lt~~lA~el~~~gIrvN~I~PG~v~T~~~~~~---------~~~~~~~~~~~~----p-----~~r~~~p~dva 213 (241)
T d2a4ka1 152 KLGVVGLARTLALELARKGVRVNVLLPGLIQTPMTAGL---------PPWAWEQEVGAS----P-----LGRAGRPEEVA 213 (241)
T ss_dssp SSHHHHHHHHHHHHHTTTTCEEEEEEECSBCCGGGTTS---------CHHHHHHHHHTS----T-----TCSCBCHHHHH
T ss_pred hHHHHHHHHHHHHHHhHhCCEEeeeccCcCCCHHHHhh---------hHhHHHHHHhCC----C-----CCCCcCHHHHH
Confidence 99999888755 4579999999999855432211 112222222111 1 11245679999
Q ss_pred HHHHHHHHHhccCCCCCcEEEecCC
Q 010075 310 NAMIVAMVAHAKQPSDANIYHVGSS 334 (519)
Q Consensus 310 ~aii~a~~~~~~~~~~~~iyni~s~ 334 (519)
+++..++..... --.+++..+.+|
T Consensus 214 ~~v~fL~S~~s~-~itG~~i~vDGG 237 (241)
T d2a4ka1 214 QAALFLLSEESA-YITGQALYVDGG 237 (241)
T ss_dssp HHHHHHHSGGGT-TCCSCEEEESTT
T ss_pred HHHHHHhcchhC-CCcCceEEeCCC
Confidence 999999864322 223677888776
|
| >d1ja9a_ c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 1,3,6,8-tetrahydroxynaphthalene reductase species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]
Probab=99.52 E-value=1.1e-13 Score=133.08 Aligned_cols=234 Identities=14% Similarity=0.103 Sum_probs=144.0
Q ss_pred cCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 010075 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (519)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (519)
++||+||||||||.||+++++.|++.| .+|++..|.... ..+++.+++ ++ ...++..
T Consensus 4 L~GK~alITGas~GIG~aia~~la~~G---~~Vvi~~~~~~~--~~~~~~~~~---------~~---------~g~~~~~ 60 (259)
T d1ja9a_ 4 LAGKVALTTGAGRGIGRGIAIELGRRG---ASVVVNYGSSSK--AAEEVVAEL---------KK---------LGAQGVA 60 (259)
T ss_dssp TTTCEEEETTTTSHHHHHHHHHHHHTT---CEEEEEESSCHH--HHHHHHHHH---------HH---------TTCCEEE
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHcC---CEEEEEcCCChH--HHHHHHHHH---------HH---------cCCCceE
Confidence 679999999999999999999999999 677776665422 223322221 11 1357889
Q ss_pred EeccCCCCCCCCChhhhHHHHhcCccEEEEcCccCCc-------cccHHHHHHHhHHHHHHHHHHHHh-ccCCceEEEEe
Q 010075 90 VPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKK-CVKLKVFVHVS 161 (519)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~~~vdiViH~Aa~v~f-------~~~~~~~~~~Nv~gt~~ll~~a~~-~~~l~~~V~vS 161 (519)
+.+|+++++--....+........+|++||+||.... .+.++..+++|+.+...+++.+.. +++-.+.+.++
T Consensus 61 ~~~D~~~~~~v~~~~~~~~~~~g~idilinnag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~g~~iii~ 140 (259)
T d1ja9a_ 61 IQADISKPSEVVALFDKAVSHFGGLDFVMSNSGMEVWCDELEVTQELFDKVFNLNTRGQFFVAQQGLKHCRRGGRIILTS 140 (259)
T ss_dssp EECCTTSHHHHHHHHHHHHHHHSCEEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHEEEEEEEEEEC
T ss_pred ecCCCCCHHHHHHHHHHHHHHcCCCcEEEeccccccccccccchHHHHHHHHhhccceeeeehhhhhhhhhcCCcccccc
Confidence 9999996321000000111123469999999998643 256788899999999999888754 33334566665
Q ss_pred ccee-ecCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcHHHHHHHHHHH
Q 010075 162 TAYV-AGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEM 240 (519)
Q Consensus 162 Ta~v-~~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~Y~~sK~~aE~ 240 (519)
|... .... +....|+.||+..+.
T Consensus 141 s~~~~~~~~--------------------------------------------------------~~~~~Y~asK~al~~ 164 (259)
T d1ja9a_ 141 SIAAVMTGI--------------------------------------------------------PNHALYAGSKAAVEG 164 (259)
T ss_dssp CGGGTCCSC--------------------------------------------------------CSCHHHHHHHHHHHH
T ss_pred cccccccCC--------------------------------------------------------CCchhHHHHHHHHHH
Confidence 5432 1100 123579999998888
Q ss_pred HHHHh-----hcCCcEEEEecCccccCCC------CCCCcccccccccHHHHHHhhcCCceeeccCCCceeeeeeHHHHH
Q 010075 241 LMQQS-----KENLSLVIIRPTVVSGTYK------EPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVV 309 (519)
Q Consensus 241 lv~~~-----~~~lp~~IvRPs~V~g~~~------~p~~gw~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~d~vpVDdva 309 (519)
+++.. ..++.+..|.||.|-.+.. .+...+.. .....+...+.... ...-+.-.+|||
T Consensus 165 l~r~lA~e~~~~gIrvN~I~PG~i~T~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~---------pl~R~g~p~eVa 233 (259)
T d1ja9a_ 165 FCRAFAVDCGAKGVTVNCIAPGGVKTDMFDENSWHYAPGGYKG--MPQEKIDEGLANMN---------PLKRIGYPADIG 233 (259)
T ss_dssp HHHHHHHHHGGGTCEEEEEEECCBSSHHHHHHGGGTSTTCCTT--CCHHHHHHHHHHTS---------TTSSCBCHHHHH
T ss_pred HHHHHHHHHhhcCeEEeccCcCCccChhhhhhhhhhhhhhccc--CCHHHHHHHHHhCC---------CCCCCcCHHHHH
Confidence 87754 4579999999999864321 00000000 01111122221111 112346678999
Q ss_pred HHHHHHHHHhccCCCCCcEEEecCC
Q 010075 310 NAMIVAMVAHAKQPSDANIYHVGSS 334 (519)
Q Consensus 310 ~aii~a~~~~~~~~~~~~iyni~s~ 334 (519)
++++.++.... .--.+.+..+.+|
T Consensus 234 ~~v~fL~S~~a-~~itG~~i~vDGG 257 (259)
T d1ja9a_ 234 RAVSALCQEES-EWINGQVIKLTGG 257 (259)
T ss_dssp HHHHHHHSGGG-TTCCSCEEEESTT
T ss_pred HHHHHHhCchh-cCCcCceEEeCCC
Confidence 99999886443 2224678888766
|
| >d2bd0a1 c.2.1.2 (A:2-241) Bacterial sepiapterin reductase {Chlorobium tepidum [TaxId: 1097]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Bacterial sepiapterin reductase species: Chlorobium tepidum [TaxId: 1097]
Probab=99.52 E-value=1.6e-13 Score=130.35 Aligned_cols=174 Identities=17% Similarity=0.186 Sum_probs=117.0
Q ss_pred CEEEEeCCccHHHHHHHHHHHHhCCCc----cEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceE
Q 010075 13 KTILVSGVTGFVAKVFIEKILRVQPNV----KKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKIT 88 (519)
Q Consensus 13 k~VlITGaTGFlG~~Lv~~LL~~g~~v----~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~ 88 (519)
+.||||||++.||++++++|++.|.++ ..|++..|+... .+.+.+++ ++ ...++.
T Consensus 2 ~VvlITGas~GIG~aia~~la~~G~~~~~~~~~v~~~~r~~~~---l~~~~~~~---------~~---------~g~~~~ 60 (240)
T d2bd0a1 2 HILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAAD---LEKISLEC---------RA---------EGALTD 60 (240)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHHTTTCTTCCEEEEEEESCHHH---HHHHHHHH---------HT---------TTCEEE
T ss_pred CEEEEccCCCHHHHHHHHHHHHhCccccccCcEEEEEeCCHHH---HHHHHHHH---------Hh---------cCCcEE
Confidence 458999999999999999999998542 136666665322 22222211 11 125788
Q ss_pred EEeccCCCCCCCCChhhhHHHHhcCccEEEEcCccCCc-------cccHHHHHHHhHHHHHHHHHHHHhc---cCCceEE
Q 010075 89 FVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKC---VKLKVFV 158 (519)
Q Consensus 89 ~v~gDl~~~~lgls~~~~~~~l~~~vdiViH~Aa~v~f-------~~~~~~~~~~Nv~gt~~ll~~a~~~---~~l~~~V 158 (519)
++.+|+++++--..-.+...+...++|++||+|+.... .+.++..+++|+.|+..+.+.+... ++-.++|
T Consensus 61 ~~~~Dvt~~~~v~~~~~~~~~~~g~iDilvnnAg~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Ii 140 (240)
T d2bd0a1 61 TITADISDMADVRRLTTHIVERYGHIDCLVNNAGVGRFGALSDLTEEDFDYTMNTNLKGTFFLTQALFALMERQHSGHIF 140 (240)
T ss_dssp EEECCTTSHHHHHHHHHHHHHHTSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEE
T ss_pred EEEecCCCHHHHHHHHHHHHHHcCCcceeecccccccCCccccCCHHHHhhcCCEeehHHHHHHHHHhHHHHhcCCCceE
Confidence 99999996321000000111223469999999998643 2678889999999999887776432 2456899
Q ss_pred EEecceeecCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcHHHHHHHHH
Q 010075 159 HVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMG 238 (519)
Q Consensus 159 ~vSTa~v~~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~Y~~sK~~a 238 (519)
++||....... +....|+.||+..
T Consensus 141 ~isS~~~~~~~--------------------------------------------------------~~~~~Y~asK~al 164 (240)
T d2bd0a1 141 FITSVAATKAF--------------------------------------------------------RHSSIYCMSKFGQ 164 (240)
T ss_dssp EECCGGGTSCC--------------------------------------------------------TTCHHHHHHHHHH
T ss_pred EEechhhcCCC--------------------------------------------------------CCChHHHHHHHHH
Confidence 99987543211 1235799999988
Q ss_pred HHHHHHh-----hcCCcEEEEecCccccCC
Q 010075 239 EMLMQQS-----KENLSLVIIRPTVVSGTY 263 (519)
Q Consensus 239 E~lv~~~-----~~~lp~~IvRPs~V~g~~ 263 (519)
+.+.+.. ..++.+..+-||.|-.+.
T Consensus 165 ~~lt~~la~el~~~gIrvn~i~PG~v~T~~ 194 (240)
T d2bd0a1 165 RGLVETMRLYARKCNVRITDVQPGAVYTPM 194 (240)
T ss_dssp HHHHHHHHHHHTTTTEEEEEEEECCBCSTT
T ss_pred HHHHHHHHHHhCcCCeEEEEeeeCcccCch
Confidence 8777654 457999999999986653
|
| >d2gdza1 c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrogenase, PGDH {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 15-hydroxyprostaglandin dehydrogenase, PGDH species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.52 E-value=5.3e-14 Score=134.98 Aligned_cols=226 Identities=16% Similarity=0.211 Sum_probs=143.4
Q ss_pred CCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEE
Q 010075 11 ENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFV 90 (519)
Q Consensus 11 ~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v 90 (519)
+||++|||||++.||++++++|++.| .+|++..|+... .++..+++ .++. ...++.++
T Consensus 2 ~GKvalITGas~GIG~aia~~la~~G---a~V~i~~r~~~~---~~~~~~~l---------~~~~-------~~~~~~~~ 59 (254)
T d2gdza1 2 NGKVALVTGAAQGIGRAFAEALLLKG---AKVALVDWNLEA---GVQCKAAL---------HEQF-------EPQKTLFI 59 (254)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTT---CEEEEEESCHHH---HHHHHHHH---------TTTS-------CGGGEEEE
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCC---CEEEEEECCHHH---HHHHHHHH---------HHhc-------CCCcEEEE
Confidence 69999999999999999999999999 688898886432 12222111 1111 13578999
Q ss_pred eccCCCCCCCCChhhhHHHH-------hcCccEEEEcCccCCccccHHHHHHHhHHHHHHHHHHHHh-cc-----CCceE
Q 010075 91 PGDISSEDLGLKDSNLKEEL-------WNELDIMVNSAAITKFDERYDVAFGINTLGVIHLVNFAKK-CV-----KLKVF 157 (519)
Q Consensus 91 ~gDl~~~~lgls~~~~~~~l-------~~~vdiViH~Aa~v~f~~~~~~~~~~Nv~gt~~ll~~a~~-~~-----~l~~~ 157 (519)
.+|++++ +..+.+ ..++|++||+|+... .++++..+++|+.++..+.+++.+ +. .-.++
T Consensus 60 ~~Dv~~~-------~~v~~~~~~~~~~~G~iDilVnnAg~~~-~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~~~~g~I 131 (254)
T d2gdza1 60 QCDVADQ-------QQLRDTFRKVVDHFGRLDILVNNAGVNN-EKNWEKTLQINLVSVISGTYLGLDYMSKQNGGEGGII 131 (254)
T ss_dssp ECCTTSH-------HHHHHHHHHHHHHHSCCCEEEECCCCCC-SSSHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEE
T ss_pred EeecCCH-------HHHHHHHHHHHHHcCCcCeecccccccc-cccchheeeeehhhHHHHHHHHHHHHHHhhcCCCcEE
Confidence 9999963 222232 247999999999854 467899999999998888777643 21 12569
Q ss_pred EEEecceeecCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcHHHHHHHH
Q 010075 158 VHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTM 237 (519)
Q Consensus 158 V~vSTa~v~~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~Y~~sK~~ 237 (519)
|++||....... +....|+.||+.
T Consensus 132 v~isS~~~~~~~--------------------------------------------------------~~~~~Y~asKaa 155 (254)
T d2gdza1 132 INMSSLAGLMPV--------------------------------------------------------AQQPVYCASKHG 155 (254)
T ss_dssp EEECCGGGTSCC--------------------------------------------------------TTCHHHHHHHHH
T ss_pred EeeccHhhccCC--------------------------------------------------------CCccchHHHHHH
Confidence 999997543211 123469999998
Q ss_pred HHHHHHH------h-hcCCcEEEEecCccccCCCCCCCcccccccccHHHHHHhhcCCceeeccCCCceeeeeeHHHHHH
Q 010075 238 GEMLMQQ------S-KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVN 310 (519)
Q Consensus 238 aE~lv~~------~-~~~lp~~IvRPs~V~g~~~~p~~gw~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~d~vpVDdva~ 310 (519)
.+.+.+. + ..++.+..|-||.|-.+.-+..+.-. ...........+... ++ ..-+...+|+|+
T Consensus 156 l~~ltrs~ala~e~~~~gIrVN~I~PG~i~T~~~~~~~~~~-~~~~~~~~~~~~~~~----~p-----~~r~~~pedvA~ 225 (254)
T d2gdza1 156 IVGFTRSAALAANLMNSGVRLNAICPGFVNTAILESIEKEE-NMGQYIEYKDHIKDM----IK-----YYGILDPPLIAN 225 (254)
T ss_dssp HHHHHHHHHHHHHHHTCCEEEEEEEESCBSSHHHHGGGCHH-HHGGGGGGHHHHHHH----HH-----HHCCBCHHHHHH
T ss_pred HHHHHHHHHHHHHhcCCCEEEEEEEcCCCCChhhhhccccc-cccccHHHHHHHHhc----CC-----CCCCcCHHHHHH
Confidence 8887652 2 45799999999988554221110000 000000000000000 00 011345689999
Q ss_pred HHHHHHHHhccCCCCCcEEEecCCC
Q 010075 311 AMIVAMVAHAKQPSDANIYHVGSSL 335 (519)
Q Consensus 311 aii~a~~~~~~~~~~~~iyni~s~~ 335 (519)
+++.++.... -.+++..+.+|.
T Consensus 226 ~v~fL~s~~~---itG~~i~VdGG~ 247 (254)
T d2gdza1 226 GLITLIEDDA---LNGAIMKITTSK 247 (254)
T ss_dssp HHHHHHHCTT---CSSCEEEEETTT
T ss_pred HHHHHHcCCC---CCCCEEEECCCC
Confidence 9999987432 247888888773
|
| >d2ag5a1 c.2.1.2 (A:1-245) Dehydrogenase/reductase SDR family member 6, DHRS6 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dehydrogenase/reductase SDR family member 6, DHRS6 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.50 E-value=2.4e-13 Score=129.52 Aligned_cols=224 Identities=11% Similarity=0.060 Sum_probs=145.8
Q ss_pred cCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 010075 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (519)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (519)
++||+++||||++.||+++++.|++.| .+|++..|++ ++++ ++ .+ ...+..
T Consensus 4 l~gK~alITGas~GIG~aia~~la~~G---~~Vi~~~r~~------~~l~-~~---------~~----------~~~~~~ 54 (245)
T d2ag5a1 4 LDGKVIILTAAAQGIGQAAALAFAREG---AKVIATDINE------SKLQ-EL---------EK----------YPGIQT 54 (245)
T ss_dssp TTTCEEEESSTTSHHHHHHHHHHHHTT---CEEEEEESCH------HHHG-GG---------GG----------STTEEE
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHcC---CEEEEEeCCH------HHHH-HH---------Hh----------ccCCce
Confidence 789999999999999999999999999 6788888863 2222 11 01 135667
Q ss_pred EeccCCCCCCCCChhhhHHHHhcCccEEEEcCccCCc-------cccHHHHHHHhHHHHHHHHHHHHhc---cCCceEEE
Q 010075 90 VPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKC---VKLKVFVH 159 (519)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~~~vdiViH~Aa~v~f-------~~~~~~~~~~Nv~gt~~ll~~a~~~---~~l~~~V~ 159 (519)
...|+...+ ..+.......++|++||+||.... .+.++..+++|+.|+..+.+.+.+. .+-.++|+
T Consensus 55 ~~~d~~~~~----~~~~~~~~~~~id~lVn~ag~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~~~g~Ii~ 130 (245)
T d2ag5a1 55 RVLDVTKKK----QIDQFANEVERLDVLFNVAGFVHHGTVLDCEEKDWDFSMNLNVRSMYLMIKAFLPKMLAQKSGNIIN 130 (245)
T ss_dssp EECCTTCHH----HHHHHHHHCSCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEE
T ss_pred eeeeccccc----cccccccccccceeEEecccccCCCChhhCCHHHHHHHHHHhhccchhHHHhhCcccccCCCceeee
Confidence 777877422 112222334579999999998753 2578889999999999998877542 24568999
Q ss_pred EecceeecCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcHHHHHHHHHH
Q 010075 160 VSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGE 239 (519)
Q Consensus 160 vSTa~v~~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~Y~~sK~~aE 239 (519)
+||....- . + ......|+.+|+..+
T Consensus 131 isS~~~~~--~------~-----------------------------------------------~~~~~~Y~~sKaal~ 155 (245)
T d2ag5a1 131 MSSVASSV--K------G-----------------------------------------------VVNRCVYSTTKAAVI 155 (245)
T ss_dssp ECCSBTTT--B------C-----------------------------------------------CTTBHHHHHHHHHHH
T ss_pred eechhhcc--C------C-----------------------------------------------ccchhHHHHHHHHHH
Confidence 98864310 0 0 023457999999999
Q ss_pred HHHHHh-----hcCCcEEEEecCccccCCCCCCCcccccccccHHHHHHhhcCCceeeccCCCceeeeeeHHHHHHHHHH
Q 010075 240 MLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMIV 314 (519)
Q Consensus 240 ~lv~~~-----~~~lp~~IvRPs~V~g~~~~p~~gw~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~d~vpVDdva~aii~ 314 (519)
.+++.. ..++.+..|.||.|-.+.... +.............+.... ...-+.-.+|+|+++..
T Consensus 156 ~l~r~lA~e~~~~gIrvN~I~PG~i~T~~~~~---~~~~~~~~~~~~~~~~~~~---------pl~R~~~pedva~~v~f 223 (245)
T d2ag5a1 156 GLTKSVAADFIQQGIRCNCVCPGTVDTPSLQE---RIQARGNPEEARNDFLKRQ---------KTGRFATAEEIAMLCVY 223 (245)
T ss_dssp HHHHHHHHHHGGGTEEEEEEEESCEECHHHHH---HHHHSSSHHHHHHHHHHTC---------TTSSCEEHHHHHHHHHH
T ss_pred HHHHHHHHHhhhhCcEEEEEeeceeechhhHh---hhhhhhhhHHHHHHHHhcC---------CCCCCcCHHHHHHHHHH
Confidence 888754 557999999999886643210 0000011111122111111 11224567899999999
Q ss_pred HHHHhccCCCCCcEEEecCC
Q 010075 315 AMVAHAKQPSDANIYHVGSS 334 (519)
Q Consensus 315 a~~~~~~~~~~~~iyni~s~ 334 (519)
++.... .--.+++..+.+|
T Consensus 224 L~s~~s-~~iTG~~i~VDGG 242 (245)
T d2ag5a1 224 LASDES-AYVTGNPVIIDGG 242 (245)
T ss_dssp HHSGGG-TTCCSCEEEECTT
T ss_pred HhChhh-CCCcCceEEeCCC
Confidence 886433 2223678888776
|
| >d1jtva_ c.2.1.2 (A:) Human estrogenic 17beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Human estrogenic 17beta-hydroxysteroid dehydrogenase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.49 E-value=3.3e-13 Score=131.47 Aligned_cols=171 Identities=11% Similarity=0.121 Sum_probs=119.3
Q ss_pred CCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEEe
Q 010075 12 NKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVP 91 (519)
Q Consensus 12 ~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v~ 91 (519)
.|.|||||||+.||++++++|++.|..|..|+...|........+...+++ .....++..+.
T Consensus 2 kkVvlITGassGIG~a~A~~la~~Ga~v~~v~~~~~~~~~~~~l~~~~~~~------------------~~~~~~~~~~~ 63 (285)
T d1jtva_ 2 RTVVLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARAL------------------ACPPGSLETLQ 63 (285)
T ss_dssp CEEEEESCCSSHHHHHHHHHHHTCTTCCEEEEEEESCGGGTHHHHHHHHHT------------------TCCTTSEEEEE
T ss_pred CCEEEEccCCCHHHHHHHHHHHHCCCCeEEEEEecCChhhhHHHHHHHHHH------------------hccCCceEEEe
Confidence 577899999999999999999999976656666666543332222211111 01136799999
Q ss_pred ccCCCCCCCCChhhhHHHHh-----cCccEEEEcCccCCc-------cccHHHHHHHhHHHHHHHHHHHHh-c--cCCce
Q 010075 92 GDISSEDLGLKDSNLKEELW-----NELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKK-C--VKLKV 156 (519)
Q Consensus 92 gDl~~~~lgls~~~~~~~l~-----~~vdiViH~Aa~v~f-------~~~~~~~~~~Nv~gt~~ll~~a~~-~--~~l~~ 156 (519)
+|++++ +..+.+. ..+|+++|+|+.... .+.++..+++|+.|+.++.+.+.. | .+-.+
T Consensus 64 ~Dv~~~-------~~~~~~~~~~~~g~idilvnnag~~~~~~~~~~~~e~~~~~~~vN~~g~~~~~~~~lp~m~~~~~G~ 136 (285)
T d1jtva_ 64 LDVRDS-------KSVAAARERVTEGRVDVLVCNAGLGLLGPLEALGEDAVASVLDVNVVGTVRMLQAFLPDMKRRGSGR 136 (285)
T ss_dssp CCTTCH-------HHHHHHHHTCTTSCCSEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEE
T ss_pred ccccch-------HhhhhhhhhccccchhhhhhcccccccccccchhHhhhhhhhhcchhHHHHHHHHHHHHHHHcCCCc
Confidence 999963 2233333 359999999998643 256888899999999988877643 2 25578
Q ss_pred EEEEecceeecCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcHHHHHHH
Q 010075 157 FVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKT 236 (519)
Q Consensus 157 ~V~vSTa~v~~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~Y~~sK~ 236 (519)
+|++||....... +....|+.||+
T Consensus 137 Iv~isS~~g~~~~--------------------------------------------------------~~~~~Y~asKa 160 (285)
T d1jtva_ 137 VLVTGSVGGLMGL--------------------------------------------------------PFNDVYCASKF 160 (285)
T ss_dssp EEEEEEGGGTSCC--------------------------------------------------------TTCHHHHHHHH
T ss_pred eEEEechhhcCCC--------------------------------------------------------CCchHHHHHHH
Confidence 9999997543211 22357999999
Q ss_pred HHHHHHHHh-----hcCCcEEEEecCccccCC
Q 010075 237 MGEMLMQQS-----KENLSLVIIRPTVVSGTY 263 (519)
Q Consensus 237 ~aE~lv~~~-----~~~lp~~IvRPs~V~g~~ 263 (519)
..+.+.+.. ..++.+..+.||.|-.+.
T Consensus 161 al~~l~~~la~El~~~gIrVn~V~PG~v~T~~ 192 (285)
T d1jtva_ 161 ALEGLCESLAVLLLPFGVHLSLIECGPVHTAF 192 (285)
T ss_dssp HHHHHHHHHHHHHGGGTEEEEEEEECCBCC--
T ss_pred HHHHHHHHHHHHhhccCcEEEEEecCCCCChH
Confidence 888877654 458999999999986543
|
| >d1yo6a1 c.2.1.2 (A:1-250) Putative carbonyl reductase sniffer {Caenorhabditis elegans [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Putative carbonyl reductase sniffer species: Caenorhabditis elegans [TaxId: 6239]
Probab=99.47 E-value=2.9e-13 Score=129.35 Aligned_cols=175 Identities=11% Similarity=0.161 Sum_probs=112.4
Q ss_pred cCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 010075 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (519)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (519)
|+.|+|||||||+.||++++++|++.|.. .+|++..|+.... +.+. ++ ...++.+
T Consensus 1 M~~KtilITGassGIG~a~a~~la~~G~~-~~Vi~~~R~~~~~---~~l~-------------~~--------~~~~~~~ 55 (250)
T d1yo6a1 1 MSPGSVVVTGANRGIGLGLVQQLVKDKNI-RHIIATARDVEKA---TELK-------------SI--------KDSRVHV 55 (250)
T ss_dssp CCCSEEEESSCSSHHHHHHHHHHHTCTTC-CEEEEEESSGGGC---HHHH-------------TC--------CCTTEEE
T ss_pred CcCCEEEEeCCCCHHHHHHHHHHHHCCCC-CEEEEEeCCHHHH---HHHH-------------Hh--------hCCceEE
Confidence 45699999999999999999999998854 3788888875332 1111 11 2368999
Q ss_pred EeccCCCCCCCCChhhhHHHH---hc--CccEEEEcCccCCc--------cccHHHHHHHhHHHHHHHHHHHHhc----c
Q 010075 90 VPGDISSEDLGLKDSNLKEEL---WN--ELDIMVNSAAITKF--------DERYDVAFGINTLGVIHLVNFAKKC----V 152 (519)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l---~~--~vdiViH~Aa~v~f--------~~~~~~~~~~Nv~gt~~ll~~a~~~----~ 152 (519)
+.+|+++++. -.+..+.+ .. .+|++||+||.... .+.++..+++|+.|+..+.+.+... +
T Consensus 56 ~~~Dvs~~~~---v~~~~~~i~~~~~~~~idilinnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~l~~~~ 132 (250)
T d1yo6a1 56 LPLTVTCDKS---LDTFVSKVGEIVGSDGLSLLINNAGVLLSYGTNTEPNRAVIAEQLDVNTTSVVLLTQKLLPLLKNAA 132 (250)
T ss_dssp EECCTTCHHH---HHHHHHHHHHHHGGGCCCEEEECCCCCCCBCTTSCCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHH
T ss_pred EEEecCCHHH---HHHHHHHHHHHhCCCCeEEEEEcCcccCCCCccccCCHHHHHHHHHHHhhhHHHHHHHHHHHHHHhc
Confidence 9999996321 11111112 12 49999999997421 1457788999999999887765421 1
Q ss_pred ----------CCceEEEEecceeecCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhcccccc
Q 010075 153 ----------KLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERA 222 (519)
Q Consensus 153 ----------~l~~~V~vSTa~v~~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~ 222 (519)
....++.+|+........ .. .
T Consensus 133 ~~~~~~~~~~~~~~~i~~s~~~~~~~~~-------~~---~--------------------------------------- 163 (250)
T d1yo6a1 133 SKESGDQLSVSRAAVITISSGLGSITDN-------TS---G--------------------------------------- 163 (250)
T ss_dssp HSSCSSCCCTTTCEEEEECCGGGCSTTC-------CS---T---------------------------------------
T ss_pred cCCCCccccceeccccccccccccccCC-------cc---c---------------------------------------
Confidence 123566666543322110 00 0
Q ss_pred ccCCCCcHHHHHHHHHHHHHHHh-----hcCCcEEEEecCcccc
Q 010075 223 KLHGWPNTYVFTKTMGEMLMQQS-----KENLSLVIIRPTVVSG 261 (519)
Q Consensus 223 ~~~~~~n~Y~~sK~~aE~lv~~~-----~~~lp~~IvRPs~V~g 261 (519)
....+...|+.||+....+.+.. ..++.+..+-||.|-.
T Consensus 164 ~~~~~~~aY~aSKaal~~l~~~la~el~~~gI~v~~i~PG~v~T 207 (250)
T d1yo6a1 164 SAQFPVLAYRMSKAAINMFGRTLAVDLKDDNVLVVNFCPGWVQT 207 (250)
T ss_dssp TSSSCBHHHHHHHHHHHHHHHHHHHHTGGGTCEEEEEECCCC--
T ss_pred ccchhHHHHHHHHHHHHHHHHHHHHHhcccCeEEEEEecCCCCC
Confidence 00022346999999888887654 4579999999987744
|
| >d1w6ua_ c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {Human (Homo sapiens), [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 2,4-dienoyl-CoA reductase, mitochondrial (DECR) species: Human (Homo sapiens), [TaxId: 9606]
Probab=99.46 E-value=6.8e-13 Score=129.71 Aligned_cols=231 Identities=13% Similarity=0.072 Sum_probs=142.3
Q ss_pred hcCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceE
Q 010075 9 FLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKIT 88 (519)
Q Consensus 9 ~~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~ 88 (519)
.++||+++||||||.||+++++.|++.| .+|++..|+.... +... +.+.++. ..++.
T Consensus 22 ~l~gK~alITGas~GIG~aiA~~la~~G---a~Vii~~r~~~~l---~~~~---------~~l~~~~--------g~~~~ 78 (294)
T d1w6ua_ 22 SFQGKVAFITGGGTGLGKGMTTLLSSLG---AQCVIASRKMDVL---KATA---------EQISSQT--------GNKVH 78 (294)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHTT---CEEEEEESCHHHH---HHHH---------HHHHHHH--------SSCEE
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHcC---CEEEEEECCHHHH---HHHH---------HHHHHhc--------CCceE
Confidence 5899999999999999999999999999 6889999875321 1111 1122222 36788
Q ss_pred EEeccCCCCCCCCChhhhHHHHhcCccEEEEcCccCCcc-------ccHHHHHHHhHHHHHHHHHHHH----hccCCceE
Q 010075 89 FVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKFD-------ERYDVAFGINTLGVIHLVNFAK----KCVKLKVF 157 (519)
Q Consensus 89 ~v~gDl~~~~lgls~~~~~~~l~~~vdiViH~Aa~v~f~-------~~~~~~~~~Nv~gt~~ll~~a~----~~~~l~~~ 157 (519)
.+.+|+++++-.....+.......++|++||+|+..... +.+...+.+|+.+...+...+. ....-..+
T Consensus 79 ~~~~D~~~~~~v~~~~~~~~~~~g~iDilvnnAg~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~i 158 (294)
T d1w6ua_ 79 AIQCDVRDPDMVQNTVSELIKVAGHPNIVINNAAGNFISPTERLSPNAWKTITDIVLNGTAFVTLEIGKQLIKAQKGAAF 158 (294)
T ss_dssp EEECCTTCHHHHHHHHHHHHHHTCSCSEEEECCCCCCCSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCEEE
T ss_pred EEEecccChHHHHHHhhhhhhhccccchhhhhhhhccccccccchhhhhhhheeeecccchhhhhhhhcccccccccccc
Confidence 999999963210000001112234799999999976432 3466778888888777655432 22244556
Q ss_pred EEEecceeecCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcHHHHHHHH
Q 010075 158 VHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTM 237 (519)
Q Consensus 158 V~vSTa~v~~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~Y~~sK~~ 237 (519)
+.+|+.+..... +....|+.+|+.
T Consensus 159 ~~~ss~~~~~~~--------------------------------------------------------~~~~~YsasKaa 182 (294)
T d1w6ua_ 159 LSITTIYAETGS--------------------------------------------------------GFVVPSASAKAG 182 (294)
T ss_dssp EEECCTHHHHCC--------------------------------------------------------TTCHHHHHHHHH
T ss_pred cccccchhhhcc--------------------------------------------------------cccchHHHHHHH
Confidence 666665432211 123469999999
Q ss_pred HHHHHHHh-----hcCCcEEEEecCccccCCCCCCCcccccccccHHHHHHhhcCCceeeccCCCceeeeeeHHHHHHHH
Q 010075 238 GEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAM 312 (519)
Q Consensus 238 aE~lv~~~-----~~~lp~~IvRPs~V~g~~~~p~~gw~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~d~vpVDdva~ai 312 (519)
.+.+++.. ..++.+..|-||.|-.+...... + ............. + ..-+...+|+|+++
T Consensus 183 l~~ltk~lA~ela~~gIrVN~I~PG~i~T~~~~~~~---~---~~~~~~~~~~~~~----p-----l~R~~~pediA~~v 247 (294)
T d1w6ua_ 183 VEAMSKSLAAEWGKYGMRFNVIQPGPIKTKGAFSRL---D---PTGTFEKEMIGRI----P-----CGRLGTVEELANLA 247 (294)
T ss_dssp HHHHHHHHHHHHGGGTEEEEEEEECCBCC------C---C---TTSHHHHHHHTTC----T-----TSSCBCHHHHHHHH
T ss_pred HHHHHHHHHHHHhHhCeEEEEEccCccccchhhhcc---C---CcHHHHHHHhhcC----C-----CCCCCCHHHHHHHH
Confidence 99988754 45799999999999765432110 1 0111112111111 1 11245579999999
Q ss_pred HHHHHHhccCCCCCcEEEecCC
Q 010075 313 IVAMVAHAKQPSDANIYHVGSS 334 (519)
Q Consensus 313 i~a~~~~~~~~~~~~iyni~s~ 334 (519)
..++.... .--.|++.++.+|
T Consensus 248 ~fL~sd~s-~~itG~~i~vDGG 268 (294)
T d1w6ua_ 248 AFLCSDYA-SWINGAVIKFDGG 268 (294)
T ss_dssp HHHTSGGG-TTCCSCEEEESTT
T ss_pred HHHhCchh-cCCCCcEEEECCC
Confidence 99886432 2224788999887
|
| >d1ooea_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Nematode (Caenorhabditis elegans) [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dihydropteridin reductase (pteridine reductase) species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Probab=99.45 E-value=4.1e-13 Score=127.02 Aligned_cols=206 Identities=11% Similarity=0.056 Sum_probs=132.1
Q ss_pred CCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEEe
Q 010075 12 NKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVP 91 (519)
Q Consensus 12 ~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v~ 91 (519)
..+||||||||.||++++++|++.| .+|+++.|.+... ......+.
T Consensus 2 ~gkVlITGas~GIG~aia~~l~~~G---~~V~~~~~~~~~~-------------------------------~~~~~~~~ 47 (235)
T d1ooea_ 2 SGKVIVYGGKGALGSAILEFFKKNG---YTVLNIDLSANDQ-------------------------------ADSNILVD 47 (235)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHHTT---EEEEEEESSCCTT-------------------------------SSEEEECC
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCC---CEEEEEECCchhc-------------------------------ccccceec
Confidence 4578999999999999999999998 7889999976432 12334455
Q ss_pred ccCCCCCCCCChhhhHHHH--hcCccEEEEcCccCCc--------cccHHHHHHHhHHHHHHHHHHHHh-ccCCceEEEE
Q 010075 92 GDISSEDLGLKDSNLKEEL--WNELDIMVNSAAITKF--------DERYDVAFGINTLGVIHLVNFAKK-CVKLKVFVHV 160 (519)
Q Consensus 92 gDl~~~~lgls~~~~~~~l--~~~vdiViH~Aa~v~f--------~~~~~~~~~~Nv~gt~~ll~~a~~-~~~l~~~V~v 160 (519)
+|+.....-....+..... ..++|++||+||.... .+.++..+++|+.++..+.+++.. +++-.++|++
T Consensus 48 ~~~~~~~~~~~~~~~~~~~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~g~Iv~i 127 (235)
T d1ooea_ 48 GNKNWTEQEQSILEQTASSLQGSQVDGVFCVAGGWAGGSASSKDFVKNADLMIKQSVWSSAIAAKLATTHLKPGGLLQLT 127 (235)
T ss_dssp TTSCHHHHHHHHHHHHHHHHTTCCEEEEEECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred cccCchhHHHHHHHHHHHHhcCCCeeEEEECCcccccccccccCcHHHHhhHhhhHHHHHHHHhhhcccccccceEEEEe
Confidence 6665321000001111111 2459999999996322 145677799999999998888754 3333689999
Q ss_pred ecceeecCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcHHHHHHHHHHH
Q 010075 161 STAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEM 240 (519)
Q Consensus 161 STa~v~~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~Y~~sK~~aE~ 240 (519)
||....... +....|+.||+..+.
T Consensus 128 sS~~~~~~~--------------------------------------------------------~~~~~Y~asKaal~~ 151 (235)
T d1ooea_ 128 GAAAAMGPT--------------------------------------------------------PSMIGYGMAKAAVHH 151 (235)
T ss_dssp CCGGGGSCC--------------------------------------------------------TTBHHHHHHHHHHHH
T ss_pred ccHHhcCCc--------------------------------------------------------ccccchHHHHHHHHH
Confidence 987543211 123579999999999
Q ss_pred HHHHh----h---cCCcEEEEecCccccCCCCCCCcccccccccHHHHHHhhcCCceeeccCCCceeeeeeHHHHHHHHH
Q 010075 241 LMQQS----K---ENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMI 313 (519)
Q Consensus 241 lv~~~----~---~~lp~~IvRPs~V~g~~~~p~~gw~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~d~vpVDdva~aii 313 (519)
+.+.. . .++.+..+.|+.+-.+. ...... ......+++.+++++.++
T Consensus 152 l~~~la~e~~~~~~~i~v~~i~Pg~~~T~~-----------------~~~~~~---------~~~~~~~~~~~~va~~~~ 205 (235)
T d1ooea_ 152 LTSSLAAKDSGLPDNSAVLTIMPVTLDTPM-----------------NRKWMP---------NADHSSWTPLSFISEHLL 205 (235)
T ss_dssp HHHHHHSTTSSCCTTCEEEEEEESCBCCHH-----------------HHHHST---------TCCGGGCBCHHHHHHHHH
T ss_pred HHHHHHHHhccCCCceEEEEEecCcCcCcc-----------------hhhhCc---------CCccccCCCHHHHHHHHH
Confidence 98865 1 35678888888764321 111111 112235688999999987
Q ss_pred HHHHHhccCCCCCcEEEecC
Q 010075 314 VAMVAHAKQPSDANIYHVGS 333 (519)
Q Consensus 314 ~a~~~~~~~~~~~~iyni~s 333 (519)
..+.........+....+.+
T Consensus 206 ~~l~~~~~~~~tG~~i~v~~ 225 (235)
T d1ooea_ 206 KWTTETSSRPSSGALLKITT 225 (235)
T ss_dssp HHHHCGGGCCCTTCEEEEEE
T ss_pred HHhcCccccCCCceEEEEEe
Confidence 66654443333356666643
|
| >d1oaaa_ c.2.1.2 (A:) Sepiapterin reductase {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Sepiapterin reductase species: Mouse (Mus musculus) [TaxId: 10090]
Probab=99.45 E-value=1.6e-12 Score=124.72 Aligned_cols=172 Identities=13% Similarity=0.159 Sum_probs=120.5
Q ss_pred hcCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceE
Q 010075 9 FLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKIT 88 (519)
Q Consensus 9 ~~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~ 88 (519)
-++||+++|||||+.||+++++.|.+...+-.+|++..|+... .+.+.+ .+..+.+ ..++.
T Consensus 3 ~L~gKvalITGas~GIG~aiA~~lA~~~~~G~~Vv~~~r~~~~---l~~~~~---------~l~~~~~-------~~~~~ 63 (259)
T d1oaaa_ 3 GLGCAVCVLTGASRGFGRALAPQLARLLSPGSVMLVSARSESM---LRQLKE---------ELGAQQP-------DLKVV 63 (259)
T ss_dssp CCBSEEEEESSCSSHHHHHHHHHHHTTBCTTCEEEEEESCHHH---HHHHHH---------HHHHHCT-------TSEEE
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHhcccCCCEEEEEECCHHH---HHHHHH---------HHHhhcC-------CceEE
Confidence 3689999999999999999999998632111688999886422 222222 2222222 25789
Q ss_pred EEeccCCCCCCCCChhhhHHHHh-----------cCccEEEEcCccCC------cc----ccHHHHHHHhHHHHHHHHHH
Q 010075 89 FVPGDISSEDLGLKDSNLKEELW-----------NELDIMVNSAAITK------FD----ERYDVAFGINTLGVIHLVNF 147 (519)
Q Consensus 89 ~v~gDl~~~~lgls~~~~~~~l~-----------~~vdiViH~Aa~v~------f~----~~~~~~~~~Nv~gt~~ll~~ 147 (519)
++.+|++++ +..+.+. ..+|+++|+||... +. +.++..+++|+.|+..+.+.
T Consensus 64 ~~~~Dvs~~-------~~v~~l~~~~~~~~~~~~~~~~~lvnnag~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~ 136 (259)
T d1oaaa_ 64 LAAADLGTE-------AGVQRLLSAVRELPRPEGLQRLLLINNAATLGDVSKGFLNVNDLAEVNNYWALNLTSMLCLTSG 136 (259)
T ss_dssp EEECCTTSH-------HHHHHHHHHHHHSCCCTTCCEEEEEECCCCCCCCSSCGGGCCCHHHHHHHHHHHTHHHHHHHHH
T ss_pred EEEccCCCH-------HHHHHHHHHHHHhhhhccCceEEEEecccccccCCCCccccCCHHHHHHHHHHhhhhhHHHHHH
Confidence 999999963 2223332 14789999998642 11 45788899999999999998
Q ss_pred HHhc-cC----CceEEEEecceeecCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhcccccc
Q 010075 148 AKKC-VK----LKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERA 222 (519)
Q Consensus 148 a~~~-~~----l~~~V~vSTa~v~~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~ 222 (519)
+.+. .. -.++|++||.......
T Consensus 137 ~~~~m~~~~~~~g~Iv~isS~~~~~~~----------------------------------------------------- 163 (259)
T d1oaaa_ 137 TLNAFQDSPGLSKTVVNISSLCALQPY----------------------------------------------------- 163 (259)
T ss_dssp HHHTSCCCTTCEEEEEEECCGGGTSCC-----------------------------------------------------
T ss_pred HHHHHHhcCCCcccccccccccccCCC-----------------------------------------------------
Confidence 7653 21 3579999987543211
Q ss_pred ccCCCCcHHHHHHHHHHHHHHHh---hcCCcEEEEecCccccC
Q 010075 223 KLHGWPNTYVFTKTMGEMLMQQS---KENLSLVIIRPTVVSGT 262 (519)
Q Consensus 223 ~~~~~~n~Y~~sK~~aE~lv~~~---~~~lp~~IvRPs~V~g~ 262 (519)
.....|+.||+..+.+.+.. ..++.+..+-||.|-.+
T Consensus 164 ---~~~~~Y~asKaal~~lt~~la~e~~gIrVn~v~PG~i~T~ 203 (259)
T d1oaaa_ 164 ---KGWGLYCAGKAARDMLYQVLAAEEPSVRVLSYAPGPLDND 203 (259)
T ss_dssp ---TTCHHHHHHHHHHHHHHHHHHHHCTTEEEEEEECCSBSSH
T ss_pred ---ccchHHHHHHHHHHHHHHHHHhCCCCCEEEEEEcCCCCCH
Confidence 12357999999999888765 56899999999988765
|
| >d1snya_ c.2.1.2 (A:) Carbonyl reductase sniffer {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Carbonyl reductase sniffer species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]
Probab=99.45 E-value=1.5e-12 Score=124.08 Aligned_cols=173 Identities=16% Similarity=0.165 Sum_probs=116.7
Q ss_pred CCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEEe
Q 010075 12 NKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVP 91 (519)
Q Consensus 12 ~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v~ 91 (519)
.|+|||||||+.||++++++|++....-.+|++..|+.......+.+. +. ..++.++.
T Consensus 2 MKtilITGas~GIG~a~a~~l~~~a~~g~~V~~~~r~~~~~~~~~~~~-------------~~---------~~~~~~~~ 59 (248)
T d1snya_ 2 MNSILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKELEDLA-------------KN---------HSNIHILE 59 (248)
T ss_dssp CSEEEESCCSSHHHHHHHHHHHTSSSCCSEEEEEESCTTSCHHHHHHH-------------HH---------CTTEEEEE
T ss_pred cCEEEEeCCCCHHHHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHHH-------------hc---------CCcEEEEE
Confidence 378999999999999999999864322278999999876543322211 11 26789999
Q ss_pred ccCCCCCCCCChhhhHHHH-----hcCccEEEEcCccCCc----c----ccHHHHHHHhHHHHHHHHHHHHhc-------
Q 010075 92 GDISSEDLGLKDSNLKEEL-----WNELDIMVNSAAITKF----D----ERYDVAFGINTLGVIHLVNFAKKC------- 151 (519)
Q Consensus 92 gDl~~~~lgls~~~~~~~l-----~~~vdiViH~Aa~v~f----~----~~~~~~~~~Nv~gt~~ll~~a~~~------- 151 (519)
+|+++++. -.+..+.+ ..++|++||+||.... . +.++..+++|+.|+..+.+.+...
T Consensus 60 ~Dvs~~~~---v~~~~~~i~~~~~~~~iDiLvnNAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~p~l~~~~~~ 136 (248)
T d1snya_ 60 IDLRNFDA---YDKLVADIEGVTKDQGLNVLFNNAGIAPKSARITAVRSQELLDTLQTNTVVPIMLAKACLPLLKKAAKA 136 (248)
T ss_dssp CCTTCGGG---HHHHHHHHHHHHGGGCCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHH
T ss_pred EEeccHHH---HHHHHhhhHHHhhcCCcceEEeeccccccCcccccCCHHHHHHHHHhccccHHHHHHHHHHHHHHhhhc
Confidence 99997542 11122111 2469999999997432 1 347778999999988887765321
Q ss_pred -------cCCceEEEEecceeecCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhcccccccc
Q 010075 152 -------VKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKL 224 (519)
Q Consensus 152 -------~~l~~~V~vSTa~v~~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~ 224 (519)
.+..++|++||....-.. .+.
T Consensus 137 ~~~~~~~~~~g~ii~i~S~~g~~~~------~~~---------------------------------------------- 164 (248)
T d1snya_ 137 NESQPMGVGRAAIINMSSILGSIQG------NTD---------------------------------------------- 164 (248)
T ss_dssp TTTSCSSTTTCEEEEECCGGGCSTT------CCS----------------------------------------------
T ss_pred cccccccccccccccccccccccCC------CCC----------------------------------------------
Confidence 124678999886422100 000
Q ss_pred CCCCcHHHHHHHHHHHHHHHh-----hcCCcEEEEecCccccC
Q 010075 225 HGWPNTYVFTKTMGEMLMQQS-----KENLSLVIIRPTVVSGT 262 (519)
Q Consensus 225 ~~~~n~Y~~sK~~aE~lv~~~-----~~~lp~~IvRPs~V~g~ 262 (519)
+....|+.||+....+.+.. ..++.+..+.||.|-.+
T Consensus 165 -~~~~~Y~aSKaal~~lt~~la~e~~~~gI~vn~v~PG~v~T~ 206 (248)
T d1snya_ 165 -GGMYAYRTSKSALNAATKSLSVDLYPQRIMCVSLHPGWVKTD 206 (248)
T ss_dssp -CCCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEECCCSBCST
T ss_pred -CChHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEcCCCcccCC
Confidence 12347999999888777643 45799999999988554
|
| >d1dhra_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dihydropteridin reductase (pteridine reductase) species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=99.44 E-value=6.9e-13 Score=125.58 Aligned_cols=201 Identities=11% Similarity=0.069 Sum_probs=131.9
Q ss_pred CCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEE
Q 010075 11 ENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFV 90 (519)
Q Consensus 11 ~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v 90 (519)
+||+|+||||+|.||+++++.|++.| .+|+++.|.+... ......+
T Consensus 1 egK~vlITGas~GIG~a~a~~l~~~G---~~V~~~~~~~~~~-------------------------------~~~~~~~ 46 (236)
T d1dhra_ 1 EARRVLVYGGRGALGSRCVQAFRARN---WWVASIDVVENEE-------------------------------ASASVIV 46 (236)
T ss_dssp CCCEEEEETTTSHHHHHHHHHHHTTT---CEEEEEESSCCTT-------------------------------SSEEEEC
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCC---CEEEEEeCCcccc-------------------------------cccccee
Confidence 58999999999999999999999998 6788887765432 1222334
Q ss_pred eccCCCCCCCCChhhh----HHHHh--cCccEEEEcCccCC----c----cccHHHHHHHhHHHHHHHHHHHHh-ccCCc
Q 010075 91 PGDISSEDLGLKDSNL----KEELW--NELDIMVNSAAITK----F----DERYDVAFGINTLGVIHLVNFAKK-CVKLK 155 (519)
Q Consensus 91 ~gDl~~~~lgls~~~~----~~~l~--~~vdiViH~Aa~v~----f----~~~~~~~~~~Nv~gt~~ll~~a~~-~~~l~ 155 (519)
..|..+.+ +.+. ..... .++|++||+||... + .+.++..+++|+.++..+.+++.+ +++-.
T Consensus 47 ~~~~~~~~----~~~~~~~~~~~~~~~~~iD~lInnAG~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~G 122 (236)
T d1dhra_ 47 KMTDSFTE----QADQVTAEVGKLLGDQKVDAILCVAGGWAGGNAKSKSLFKNCDLMWKQSIWTSTISSHLATKHLKEGG 122 (236)
T ss_dssp CCCSCHHH----HHHHHHHHHHHHHTTCCEEEEEECCCCCCCBCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEE
T ss_pred ecccCcHH----HHHHHHHHHHHHhCCCCceEEEECCcccccccchhcCCHHHHHHHHHHcchHHHHHHHHHHHhccccc
Confidence 44443211 1111 11122 25999999998532 1 245677899999999998888754 34446
Q ss_pred eEEEEecceeecCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcHHHHHH
Q 010075 156 VFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTK 235 (519)
Q Consensus 156 ~~V~vSTa~v~~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~Y~~sK 235 (519)
++|++||....... +....|+.||
T Consensus 123 ~Iv~isS~~~~~~~--------------------------------------------------------~~~~~Y~asK 146 (236)
T d1dhra_ 123 LLTLAGAKAALDGT--------------------------------------------------------PGMIGYGMAK 146 (236)
T ss_dssp EEEEECCGGGGSCC--------------------------------------------------------TTBHHHHHHH
T ss_pred ceeEEccHHHcCCc--------------------------------------------------------cCCcccHHHH
Confidence 89999997543211 1235799999
Q ss_pred HHHHHHHHHh----h---cCCcEEEEecCccccCCCCCCCcccccccccHHHHHHhhcCCceeeccCCCceeeeeeHHHH
Q 010075 236 TMGEMLMQQS----K---ENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMV 308 (519)
Q Consensus 236 ~~aE~lv~~~----~---~~lp~~IvRPs~V~g~~~~p~~gw~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~d~vpVDdv 308 (519)
+..+.+.+.. . .++.+..+.||.|-.+.. .... + ......++|.+++
T Consensus 147 aal~~lt~~la~El~~~~~gI~vn~v~PG~v~T~~~-----------------~~~~-------~--~~~~~~~~~pe~v 200 (236)
T d1dhra_ 147 GAVHQLCQSLAGKNSGMPSGAAAIAVLPVTLDTPMN-----------------RKSM-------P--EADFSSWTPLEFL 200 (236)
T ss_dssp HHHHHHHHHHTSTTSSCCTTCEEEEEEESCEECHHH-----------------HHHS-------T--TSCGGGSEEHHHH
T ss_pred HHHHHHHHHHHHHhccCCCcEEEEEEEeccCcCCcc-----------------hhhC-------c--cchhhcCCCHHHH
Confidence 9999999875 2 478999999998865422 1110 0 0112346889999
Q ss_pred HHHHHHHHHHhccCCCCCcEEEec
Q 010075 309 VNAMIVAMVAHAKQPSDANIYHVG 332 (519)
Q Consensus 309 a~aii~a~~~~~~~~~~~~iyni~ 332 (519)
|+.+..++.... ..-.+.+..+.
T Consensus 201 a~~~~~l~s~~~-~~i~G~~i~v~ 223 (236)
T d1dhra_ 201 VETFHDWITGNK-RPNSGSLIQVV 223 (236)
T ss_dssp HHHHHHHHTTTT-CCCTTCEEEEE
T ss_pred HHHHHHHhCCCc-cCCCCCeEEEE
Confidence 999988875332 22235566553
|
| >d1zmta1 c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Halohydrin dehalogenase HheC species: Agrobacterium tumefaciens [TaxId: 358]
Probab=99.40 E-value=1.9e-12 Score=123.82 Aligned_cols=222 Identities=14% Similarity=0.112 Sum_probs=139.0
Q ss_pred EEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEEecc
Q 010075 14 TILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVPGD 93 (519)
Q Consensus 14 ~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v~gD 93 (519)
+++||||++.||+.++++|++.| .+|++..|+.+..+..+.+. . ..+.+|
T Consensus 2 TAlVTGas~GiG~aiA~~la~~G---a~V~i~~r~~~~~~~~~~~~-------------~--------------~~~~~d 51 (252)
T d1zmta1 2 TAIVTNVKHFGGMGSALRLSEAG---HTVACHDESFKQKDELEAFA-------------E--------------TYPQLK 51 (252)
T ss_dssp EEEESSTTSTTHHHHHHHHHHTT---CEEEECCGGGGSHHHHHHHH-------------H--------------HCTTSE
T ss_pred EEEEECCCCHHHHHHHHHHHHCC---CEEEEEECCHHHHHHHHhhh-------------C--------------cEEEec
Confidence 78999999999999999999999 67888888754432211111 1 112467
Q ss_pred CCCCCCCCChhhhHH---HHhcCccEEEEcCccCC----c----cccHHHHHHHhHHHHHHHHHHHHh-c--cCCceEEE
Q 010075 94 ISSEDLGLKDSNLKE---ELWNELDIMVNSAAITK----F----DERYDVAFGINTLGVIHLVNFAKK-C--VKLKVFVH 159 (519)
Q Consensus 94 l~~~~lgls~~~~~~---~l~~~vdiViH~Aa~v~----f----~~~~~~~~~~Nv~gt~~ll~~a~~-~--~~l~~~V~ 159 (519)
+++++- ..+..+ +.+.++|++||+||... + .++++..+++|+.|+..+.+.+.. + ++-.++|+
T Consensus 52 v~~~~~---~~~~~~~~~~~~G~iDiLVnNAg~~~~~~~~~~~~~e~~~~~~~vnl~~~~~~~~~~~~~m~~~~~G~IV~ 128 (252)
T d1zmta1 52 PMSEQE---PAELIEAVTSAYGQVDVLVSNDIFAPEFQPIDKYAVEDYRGAVEALQIRPFALVNAVASQMKKRKSGHIIF 128 (252)
T ss_dssp ECCCCS---HHHHHHHHHHHHSCCCEEEEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEE
T ss_pred cCCHHH---HHHHHHHHHHHcCCCCEEEECCcCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhcccccceeec
Confidence 765431 122222 23357999999998642 2 156888899999999888876643 2 24568999
Q ss_pred EecceeecCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcHHHHHHHHHH
Q 010075 160 VSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGE 239 (519)
Q Consensus 160 vSTa~v~~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~Y~~sK~~aE 239 (519)
+||....... .....|+.||+..+
T Consensus 129 isS~~~~~~~--------------------------------------------------------~~~~~Y~asKaal~ 152 (252)
T d1zmta1 129 ITSATPFGPW--------------------------------------------------------KELSTYTSARAGAC 152 (252)
T ss_dssp ECCSTTTSCC--------------------------------------------------------TTCHHHHHHHHHHH
T ss_pred cccccccccc--------------------------------------------------------ccccccccccccHH
Confidence 9997543211 12347999999998
Q ss_pred HHHHHh-----hcCCcEEEEecCccccCCCCCCCcccccccccHHHHHHhhcCCceeeccCCCceeeeeeHHHHHHHHHH
Q 010075 240 MLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMIV 314 (519)
Q Consensus 240 ~lv~~~-----~~~lp~~IvRPs~V~g~~~~p~~gw~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~d~vpVDdva~aii~ 314 (519)
.+.+.. ..++.+..|-||.|-.+....... .+.............+.. + ..-+...+|||++++.
T Consensus 153 ~lt~~lA~ela~~gIrVN~I~PG~i~T~~~~~~~~-~~~~~~~~e~~~~~~~~~----p-----l~R~g~pedvA~~v~f 222 (252)
T d1zmta1 153 TLANALSKELGEYNIPVFAIGPNYLHSEDSPYFYP-TEPWKTNPEHVAHVKKVT----A-----LQRLGTQKELGELVAF 222 (252)
T ss_dssp HHHHHHHHHHGGGTCCEEEEEESSBCCBTCCSSCB-HHHHTTCHHHHHHHHHHS----S-----SSSCBCHHHHHHHHHH
T ss_pred HHHHHHHHHhcccCcEEEEEecCCCcCcchhhhhh-cccccCCHHHHHHHHhcC----C-----CCCCcCHHHHHHHHHH
Confidence 888754 567999999999997654321100 000001111122111111 1 1124567899999999
Q ss_pred HHHHhccCCCCCcEEEecCCC
Q 010075 315 AMVAHAKQPSDANIYHVGSSL 335 (519)
Q Consensus 315 a~~~~~~~~~~~~iyni~s~~ 335 (519)
++.... .--.+++.++.+|-
T Consensus 223 L~S~~s-~~iTG~~i~vdGG~ 242 (252)
T d1zmta1 223 LASGSC-DYLTGQVFWLAGGF 242 (252)
T ss_dssp HHTTSC-GGGTTCEEEESTTC
T ss_pred HhCchh-cCCcCCeEEECCCc
Confidence 885322 11236888888874
|
| >d1qsga_ c.2.1.2 (A:) Enoyl-ACP reductase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Escherichia coli [TaxId: 562]
Probab=99.40 E-value=3.3e-12 Score=122.21 Aligned_cols=225 Identities=15% Similarity=0.161 Sum_probs=142.1
Q ss_pred hcCCCEEEEeCCcc--HHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCc
Q 010075 9 FLENKTILVSGVTG--FVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEK 86 (519)
Q Consensus 9 ~~~~k~VlITGaTG--FlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~ 86 (519)
+++||+||||||+| .||+++++.|++.| .+|++..|+.+.....+.+. .. ..+
T Consensus 2 ~L~gK~~lITGass~~GIG~aiA~~l~~~G---~~V~i~~~~~~~~~~~~~~~-------------~~---------~~~ 56 (258)
T d1qsga_ 2 FLSGKRILVTGVASKLSIAYGIAQAMHREG---AELAFTYQNDKLKGRVEEFA-------------AQ---------LGS 56 (258)
T ss_dssp TTTTCEEEECCCCSTTSHHHHHHHHHHHTT---CEEEEEESSTTTHHHHHHHH-------------HH---------TTC
T ss_pred cCCCCEEEEECCCCchhHHHHHHHHHHHcC---CEEEEEeCCHHHHHHHHHHH-------------hh---------cCC
Confidence 58999999999998 79999999999999 67888888754322211111 11 245
Q ss_pred eEEEeccCCCCCCCCChhhhHHH---HhcCccEEEEcCccCCcc------------ccHHHHHHHhHHHHHHHHHHHHhc
Q 010075 87 ITFVPGDISSEDLGLKDSNLKEE---LWNELDIMVNSAAITKFD------------ERYDVAFGINTLGVIHLVNFAKKC 151 (519)
Q Consensus 87 v~~v~gDl~~~~lgls~~~~~~~---l~~~vdiViH~Aa~v~f~------------~~~~~~~~~Nv~gt~~ll~~a~~~ 151 (519)
...+..|+.+... ..+.... ....+|+++|+|+..... +.+.....+|+.+...+.+.+...
T Consensus 57 ~~~~~~~~~~~~~---~~~~~~~~~~~~~~~d~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 133 (258)
T d1qsga_ 57 DIVLQCDVAEDAS---IDTMFAELGKVWPKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSM 133 (258)
T ss_dssp CCEEECCTTCHHH---HHHHHHHHHTTCSSEEEEEECCCCCCGGGGSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHGGG
T ss_pred cceeecccchHHH---HHHHHHHhhhcccccceEEEeecccccccccccccccchHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 5677888875221 0111111 123589999999875421 234556777888888888877653
Q ss_pred -cCCceEEEEecceeecCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcH
Q 010075 152 -VKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNT 230 (519)
Q Consensus 152 -~~l~~~V~vSTa~v~~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~ 230 (519)
++-+.++++||....... +....
T Consensus 134 ~~~~~~Ii~iss~~~~~~~--------------------------------------------------------~~~~~ 157 (258)
T d1qsga_ 134 LNPGSALLTLSYLGAERAI--------------------------------------------------------PNYNV 157 (258)
T ss_dssp EEEEEEEEEEECGGGTSBC--------------------------------------------------------TTTTH
T ss_pred ccCCcEEEEecchhhccCC--------------------------------------------------------CCcHH
Confidence 233568888886532110 12357
Q ss_pred HHHHHHHHHHHHHHh-----hcCCcEEEEecCccccCCCCCCCcccccccccHHHHHHhhcCCceeeccCCCceeeeeeH
Q 010075 231 YVFTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPV 305 (519)
Q Consensus 231 Y~~sK~~aE~lv~~~-----~~~lp~~IvRPs~V~g~~~~p~~gw~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~d~vpV 305 (519)
|+.||+..+.+++.. ..++.+..|.||.|..+..+.. ............ ..+. .-+...
T Consensus 158 Y~~sKaal~~ltr~lA~el~~~gIrVN~I~PG~i~T~~~~~~-------~~~~~~~~~~~~----~~pl-----~R~~~p 221 (258)
T d1qsga_ 158 MGLAKASLEANVRYMANAMGPEGVRVNAISAGPIRTLAASGI-------KDFRKMLAHCEA----VTPI-----RRTVTI 221 (258)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCCCCTTGGGS-------TTHHHHHHHHHH----HSTT-----SSCCCH
T ss_pred HHHHHHHHHHHHHHHHHHhCccCceeeccccccccccccccc-------chhhhHHHHHHh----CCCC-----CCCcCH
Confidence 999999999888765 4579999999999976644211 111111111111 0111 124567
Q ss_pred HHHHHHHHHHHHHhccCCCCCcEEEecCC
Q 010075 306 DMVVNAMIVAMVAHAKQPSDANIYHVGSS 334 (519)
Q Consensus 306 Ddva~aii~a~~~~~~~~~~~~iyni~s~ 334 (519)
+|+|+++..++.... ..-.+.+..+.+|
T Consensus 222 eeia~~v~fL~s~~s-~~itG~~i~vDGG 249 (258)
T d1qsga_ 222 EDVGNSAAFLCSDLS-AGISGEVVHVDGG 249 (258)
T ss_dssp HHHHHHHHHHTSGGG-TTCCSCEEEESTT
T ss_pred HHHHHHHHHHhCchh-cCccCceEEECcC
Confidence 999999998886432 2224778888777
|
| >d1xu9a_ c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 11-beta-hydroxysteroid dehydrogenase 1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.40 E-value=1.3e-12 Score=126.22 Aligned_cols=205 Identities=13% Similarity=0.133 Sum_probs=133.0
Q ss_pred hhcCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCce
Q 010075 8 EFLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKI 87 (519)
Q Consensus 8 ~~~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v 87 (519)
+.++||+++|||||+.||++++++|++.| .+|++..|+... .+.+.+++ ... ....+
T Consensus 10 ~~L~GK~alITGassGIG~aiA~~la~~G---~~Vil~~r~~~~---l~~~~~~~---------~~~--------~~~~~ 66 (269)
T d1xu9a_ 10 EMLQGKKVIVTGASKGIGREMAYHLAKMG---AHVVVTARSKET---LQKVVSHC---------LEL--------GAASA 66 (269)
T ss_dssp GGGTTCEEEESSCSSHHHHHHHHHHHHTT---CEEEEEESCHHH---HHHHHHHH---------HHH--------TCSEE
T ss_pred cccCCCEEEEeCCCcHHHHHHHHHHHHCC---CEEEEEECCHHH---HHHHHHHH---------hhh--------hcccc
Confidence 34799999999999999999999999999 688999997422 22222111 111 13567
Q ss_pred EEEeccCCCCCCCCChhhhHHHHhcCccEEEEcCccCCc-------cccHHHHHHHhHHHHHHHHHHHHh-c-cCCceEE
Q 010075 88 TFVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKK-C-VKLKVFV 158 (519)
Q Consensus 88 ~~v~gDl~~~~lgls~~~~~~~l~~~vdiViH~Aa~v~f-------~~~~~~~~~~Nv~gt~~ll~~a~~-~-~~l~~~V 158 (519)
..+.+|+.+........+........+|+++|+|+.... .+.++..+++|+.|+..+.+.+.. + ++-.++|
T Consensus 67 ~~~~~d~~~~~~~~~~~~~~~~~~g~~~~li~nag~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~lp~m~~~~G~ii 146 (269)
T d1xu9a_ 67 HYIAGTMEDMTFAEQFVAQAGKLMGGLDMLILNHITNTSLNLFHDDIHHVRKSMEVNFLSYVVLTVAALPMLKQSNGSIV 146 (269)
T ss_dssp EEEECCTTCHHHHHHHHHHHHHHHTSCSEEEECCCCCCCCCCCCSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEE
T ss_pred hhhhhhhhhHHHHHHHHHHHHHHhCCccccccccccccccccccCCHHHhhhheeeehhhHHHHHHHHHHHHHhcCCcce
Confidence 888899885321100111111233469999999987532 246778899999998888776643 2 1235889
Q ss_pred EEecceeecCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcHHHHHHHHH
Q 010075 159 HVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMG 238 (519)
Q Consensus 159 ~vSTa~v~~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~Y~~sK~~a 238 (519)
.+||....... +....|+.||+..
T Consensus 147 ~isS~~~~~~~--------------------------------------------------------p~~~~Y~asKaal 170 (269)
T d1xu9a_ 147 VVSSLAGKVAY--------------------------------------------------------PMVAAYSASKFAL 170 (269)
T ss_dssp EEEEGGGTSCC--------------------------------------------------------TTCHHHHHHHHHH
T ss_pred EeccchhcCCC--------------------------------------------------------CCchHHHHHHHHH
Confidence 99987543211 2235799999998
Q ss_pred HHHHHHh-------hcCCcEEEEecCccccCCCCCCCcccccccccHHHHHHhhcCCceeeccCCCceeeeeeHHHHHHH
Q 010075 239 EMLMQQS-------KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNA 311 (519)
Q Consensus 239 E~lv~~~-------~~~lp~~IvRPs~V~g~~~~p~~gw~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~d~vpVDdva~a 311 (519)
+.+.+.. ..++.+..+.||.|-.+. ......+ ......++.+++|+.
T Consensus 171 ~~~~~~La~El~~~~~~I~V~~v~PG~v~T~~-----------------~~~~~~~---------~~~~~~~~~e~~a~~ 224 (269)
T d1xu9a_ 171 DGFFSSIRKEYSVSRVNVSITLCVLGLIDTET-----------------AMKAVSG---------IVHMQAAPKEECALE 224 (269)
T ss_dssp HHHHHHHHHHHHHHTCCCEEEEEEECCBCCHH-----------------HHHHSCG---------GGGGGCBCHHHHHHH
T ss_pred HHHHHHHHHHhhhcCCCEEEEEEecCcCCCcH-----------------HHHhccC---------CccccCCCHHHHHHH
Confidence 8877654 135888899998774421 1111111 112234678999999
Q ss_pred HHHHHH
Q 010075 312 MIVAMV 317 (519)
Q Consensus 312 ii~a~~ 317 (519)
++....
T Consensus 225 i~~~~~ 230 (269)
T d1xu9a_ 225 IIKGGA 230 (269)
T ss_dssp HHHHHH
T ss_pred HHHHhh
Confidence 988775
|
| >d2o23a1 c.2.1.2 (A:6-253) Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Type II 3-hydroxyacyl-CoA dehydrogenase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.39 E-value=5.5e-12 Score=120.02 Aligned_cols=172 Identities=13% Similarity=0.151 Sum_probs=118.8
Q ss_pred cCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 010075 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (519)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (519)
++||+++||||++.||++++++|++.| .+|++..|+..... .+.+++ ..+...
T Consensus 3 lkGKvalITGas~GIG~aia~~la~~G---~~V~~~~r~~~~~~---~~~~~l---------------------~~~~~~ 55 (248)
T d2o23a1 3 VKGLVAVITGGASGLGLATAERLVGQG---ASAVLLDLPNSGGE---AQAKKL---------------------GNNCVF 55 (248)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTT---CEEEEEECTTSSHH---HHHHHH---------------------CTTEEE
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCC---CEEEEEeCChHHHH---HHHHHh---------------------CCCccc
Confidence 689999999999999999999999999 67899998865432 211111 256677
Q ss_pred EeccCCCCCCCCChhhhHHHHhcCccEEEEcCccCCc-------------cccHHHHHHHhHHHHHHHHHHHHhc-----
Q 010075 90 VPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF-------------DERYDVAFGINTLGVIHLVNFAKKC----- 151 (519)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~~~vdiViH~Aa~v~f-------------~~~~~~~~~~Nv~gt~~ll~~a~~~----- 151 (519)
...|+.+...--...+.........|.++++++.... .+.++..+++|+.|+..+.+++...
T Consensus 56 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~ 135 (248)
T d2o23a1 56 APADVTSEKDVQTALALAKGKFGRVDVAVNCAGIAVASKTYNLKKGQTHTLEDFQRVLDVNLMGTFNVIRLVAGEMGQNE 135 (248)
T ss_dssp EECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCSEETTTTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSC
T ss_pred ccccccccccccccccccccccccccccccccccccCCCcccccccccchHHHHHHHHhHHHHHHHHHHHHhHHHHHHhh
Confidence 8888875321000111111223468888888765421 2467788999999999998887542
Q ss_pred ----cCCceEEEEecceeecCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCC
Q 010075 152 ----VKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGW 227 (519)
Q Consensus 152 ----~~l~~~V~vSTa~v~~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~ 227 (519)
.+-.++|++||.+..... ..
T Consensus 136 ~~~~~~~G~Ii~isS~~~~~~~--------------------------------------------------------~~ 159 (248)
T d2o23a1 136 PDQGGQRGVIINTASVAAFEGQ--------------------------------------------------------VG 159 (248)
T ss_dssp CCTTSCCEEEEEECCTHHHHCC--------------------------------------------------------TT
T ss_pred hhccCCceEEEEecchhhccCC--------------------------------------------------------CC
Confidence 123479999998654211 12
Q ss_pred CcHHHHHHHHHHHHHHHh-----hcCCcEEEEecCccccCCC
Q 010075 228 PNTYVFTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYK 264 (519)
Q Consensus 228 ~n~Y~~sK~~aE~lv~~~-----~~~lp~~IvRPs~V~g~~~ 264 (519)
...|+.||+..+.+.+.. ..++.+..|-||.|..+..
T Consensus 160 ~~~Y~asKaal~~lt~~la~e~~~~gIrvN~I~PG~i~T~~~ 201 (248)
T d2o23a1 160 QAAYSASKGGIVGMTLPIARDLAPIGIRVMTIAPGLFGTPLL 201 (248)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCC--
T ss_pred chHHHHHHHHHHHHHHHHHHHhcccCcceeeeccCceecchh
Confidence 357999999999988765 4579999999999876543
|
| >d2pd4a1 c.2.1.2 (A:2-275) Enoyl-ACP reductase {Helicobacter pylori [TaxId: 210]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Helicobacter pylori [TaxId: 210]
Probab=99.33 E-value=2.5e-11 Score=116.91 Aligned_cols=228 Identities=14% Similarity=0.078 Sum_probs=132.6
Q ss_pred hcCCCEEEEeCCcc--HHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCc
Q 010075 9 FLENKTILVSGVTG--FVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEK 86 (519)
Q Consensus 9 ~~~~k~VlITGaTG--FlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~ 86 (519)
+++||++|||||+| .||++++++|++.| .+|++..|+.......+.+. ++ ...
T Consensus 2 ~L~gK~alITGaag~~GIG~AiA~~la~~G---a~V~i~~r~~~~~~~~~~l~-------------~~---------~~~ 56 (274)
T d2pd4a1 2 FLKGKKGLIVGVANNKSIAYGIAQSCFNQG---ATLAFTYLNESLEKRVRPIA-------------QE---------LNS 56 (274)
T ss_dssp TTTTCEEEEECCCSTTSHHHHHHHHHHTTT---CEEEEEESSTTTHHHHHHHH-------------HH---------TTC
T ss_pred cCCCCEEEEECCCCCcHHHHHHHHHHHHCC---CEEEEEeCCHHHHHHHHHHH-------------hh---------CCc
Confidence 68999999999987 79999999999999 78899999754322222221 11 134
Q ss_pred eEEEeccCCCCCCCCChhhhHHHHhcCccEEEEcCccCCcc--------ccHHHH---HHHhHHHHHHHHHHHHhccCCc
Q 010075 87 ITFVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKFD--------ERYDVA---FGINTLGVIHLVNFAKKCVKLK 155 (519)
Q Consensus 87 v~~v~gDl~~~~lgls~~~~~~~l~~~vdiViH~Aa~v~f~--------~~~~~~---~~~Nv~gt~~ll~~a~~~~~l~ 155 (519)
..++..|++++..-.+..+........+|++||+|+..... +..... ..++..+...+.....+..+-.
T Consensus 57 ~~~~~~d~~~~~~~~~~~~~~~~~~g~id~lV~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 136 (274)
T d2pd4a1 57 PYVYELDVSKEEHFKSLYNSVKKDLGSLDFIVHSVAFAPKEALEGSLLETSKSAFNTAMEISVYSLIELTNTLKPLLNNG 136 (274)
T ss_dssp CCEEECCTTCHHHHHHHHHHHHHHTSCEEEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEE
T ss_pred eeEeeecccchhhHHHHHHHHHHHcCCCCeEEeecccccccccccccccccchhhhhhhccccccccccccccccccccC
Confidence 56788999863210000111112235799999999975321 222222 2223334444444444332333
Q ss_pred eEEEEe-cceeecCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcHHHHH
Q 010075 156 VFVHVS-TAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFT 234 (519)
Q Consensus 156 ~~V~vS-Ta~v~~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~Y~~s 234 (519)
..|.++ +....... .....|+.+
T Consensus 137 ~~i~~~s~~~~~~~~--------------------------------------------------------~~~~~y~as 160 (274)
T d2pd4a1 137 ASVLTLSYLGSTKYM--------------------------------------------------------AHYNVMGLA 160 (274)
T ss_dssp EEEEEEECGGGTSBC--------------------------------------------------------TTCHHHHHH
T ss_pred cceeeeccccccccc--------------------------------------------------------ccchhhhHH
Confidence 444433 33222111 335679999
Q ss_pred HHHHHHHHHHh-----hcCCcEEEEecCccccCCCCCCCcccccccccHHHHHHhhcCCceeeccCCCceeeeeeHHHHH
Q 010075 235 KTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVV 309 (519)
Q Consensus 235 K~~aE~lv~~~-----~~~lp~~IvRPs~V~g~~~~p~~gw~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~d~vpVDdva 309 (519)
|+..+.+++.. ..++++..+.||.+..+....... ........... ....-+...+|+|
T Consensus 161 K~al~~ltr~lA~e~~~~GIrvN~I~PG~v~T~~~~~~~~-------~~~~~~~~~~~---------~p~~r~~~pedIA 224 (274)
T d2pd4a1 161 KAALESAVRYLAVDLGKHHIRVNALSAGPIRTLASSGIAD-------FRMILKWNEIN---------APLRKNVSLEEVG 224 (274)
T ss_dssp HHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCTTGGGSTT-------HHHHHHHHHHH---------STTSSCCCHHHHH
T ss_pred HHHHHHHHHhhHHHhcCcCceecccccCcccCccccccCc-------hHHHHHHHhhh---------hhccCCcCHHHHH
Confidence 99999888754 457999999999887654321111 01111111110 0112346789999
Q ss_pred HHHHHHHHHhccCCCCCcEEEecCC
Q 010075 310 NAMIVAMVAHAKQPSDANIYHVGSS 334 (519)
Q Consensus 310 ~aii~a~~~~~~~~~~~~iyni~s~ 334 (519)
++++.++... ..--.++++.+.+|
T Consensus 225 ~~v~fL~S~~-s~~itG~~i~vDGG 248 (274)
T d2pd4a1 225 NAGMYLLSSL-SSGVSGEVHFVDAG 248 (274)
T ss_dssp HHHHHHHSGG-GTTCCSCEEEESTT
T ss_pred HHHHHHhChh-hCCCcCceEEECCC
Confidence 9999988643 22234778888777
|
| >d1wmaa1 c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Carbonyl reductase/20beta-hydroxysteroid dehydrogenase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.30 E-value=1.2e-11 Score=119.66 Aligned_cols=132 Identities=17% Similarity=0.135 Sum_probs=89.5
Q ss_pred CCCEE-EEeCCccHHHHHHHHHHHHh-CCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceE
Q 010075 11 ENKTI-LVSGVTGFVAKVFIEKILRV-QPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKIT 88 (519)
Q Consensus 11 ~~k~V-lITGaTGFlG~~Lv~~LL~~-g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~ 88 (519)
+||+| +||||++.||++++++|++. | .+|++..|+... .+... +.++++ ..++.
T Consensus 1 ~g~rVAlVTGas~GIG~a~A~~la~~~g---~~Vi~~~r~~~~---~~~~~---------~~l~~~---------~~~~~ 56 (275)
T d1wmaa1 1 SGIHVALVTGGNKGIGLAIVRDLCRLFS---GDVVLTARDVTR---GQAAV---------QQLQAE---------GLSPR 56 (275)
T ss_dssp CCCCEEEESSCSSHHHHHHHHHHHHHSS---SEEEEEESSHHH---HHHHH---------HHHHHT---------TCCCE
T ss_pred CCCeEEEECCCCCHHHHHHHHHHHHhCC---CEEEEEECCHHH---HHHHH---------HHHHhc---------CCcEE
Confidence 36766 89999999999999999987 5 688999987532 12111 112222 24678
Q ss_pred EEeccCCCCCCCCChhhhHHHHhcCccEEEEcCccCCc-------cccHHHHHHHhHHHHHHHHHHHHh-ccCCceEEEE
Q 010075 89 FVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKK-CVKLKVFVHV 160 (519)
Q Consensus 89 ~v~gDl~~~~lgls~~~~~~~l~~~vdiViH~Aa~v~f-------~~~~~~~~~~Nv~gt~~ll~~a~~-~~~l~~~V~v 160 (519)
++.+|+++.+..-.-.+...+-..++|++||+||.... .+.++..+++|+.|+..+.+.+.. +++-.++|.+
T Consensus 57 ~~~~Dvs~~~sv~~~~~~~~~~~g~iDiLVnNAGi~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~g~ivni 136 (275)
T d1wmaa1 57 FHQLDIDDLQSIRALRDFLRKEYGGLDVLVNNAGIAFKVADPTPFHIQAEVTMKTNFFGTRDVCTELLPLIKPQGRVVNV 136 (275)
T ss_dssp EEECCTTCHHHHHHHHHHHHHHHSSEEEEEECCCCCCCTTCCSCHHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEE
T ss_pred EEEEecCCHHHHHHHHHHHHHhcCCcEEEEEcCCcCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccc
Confidence 99999996321000001111223479999999997532 245777899999999999998864 2333589999
Q ss_pred ecceee
Q 010075 161 STAYVA 166 (519)
Q Consensus 161 STa~v~ 166 (519)
||....
T Consensus 137 sS~~~~ 142 (275)
T d1wmaa1 137 SSIMSV 142 (275)
T ss_dssp CCHHHH
T ss_pred ccccee
Confidence 997543
|
| >d1uaya_ c.2.1.2 (A:) Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Type II 3-hydroxyacyl-CoA dehydrogenase species: Thermus thermophilus [TaxId: 274]
Probab=99.19 E-value=1.8e-10 Score=108.31 Aligned_cols=211 Identities=12% Similarity=0.092 Sum_probs=133.6
Q ss_pred CCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEEe
Q 010075 12 NKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVP 91 (519)
Q Consensus 12 ~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v~ 91 (519)
+|+++|||||+.||++++++|++.| .+|++..|++.. .+...++
T Consensus 1 DK~alITGas~GIG~aiA~~la~~G---a~V~i~~~~~~~---------------------------------~~~~~~~ 44 (241)
T d1uaya_ 1 ERSALVTGGASGLGRAAALALKARG---YRVVVLDLRREG---------------------------------EDLIYVE 44 (241)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHHT---CEEEEEESSCCS---------------------------------SSSEEEE
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCC---CEEEEEECCccc---------------------------------ccceEee
Confidence 5899999999999999999999999 688898887532 3456778
Q ss_pred ccCCCCCCCCChhhhHHHHhcCccEEEEcCccCCc-----------cccHHHHHHHhHHHHHHHHHHHHhc---------
Q 010075 92 GDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF-----------DERYDVAFGINTLGVIHLVNFAKKC--------- 151 (519)
Q Consensus 92 gDl~~~~lgls~~~~~~~l~~~vdiViH~Aa~v~f-----------~~~~~~~~~~Nv~gt~~ll~~a~~~--------- 151 (519)
+|++.........+.. ......+.+++.++.... .+.++..+++|+.+...+...+...
T Consensus 45 ~d~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~ 123 (241)
T d1uaya_ 45 GDVTREEDVRRAVARA-QEEAPLFAVVSAAGVGLAEKILGKEGPHGLESFRRVLEVNLLGTFNVLRLAAWAMRENPPDAE 123 (241)
T ss_dssp CCTTCHHHHHHHHHHH-HHHSCEEEEEECCCCCCCCCSBCSSSBCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCCCCTT
T ss_pred ccccchhhhHHHHHhh-hccccccchhhhhhccccccccccccchhHHHHHHHHHHHhhhhHHHHHHHHHHhhhhhhhcc
Confidence 8988532111011110 112245555666554211 1456777899999988877765432
Q ss_pred cCCceEEEEecceeecCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcHH
Q 010075 152 VKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTY 231 (519)
Q Consensus 152 ~~l~~~V~vSTa~v~~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~Y 231 (519)
.+-.++|++||....... .....|
T Consensus 124 ~~~G~Ii~isS~~~~~~~--------------------------------------------------------~~~~~Y 147 (241)
T d1uaya_ 124 GQRGVIVNTASVAAFEGQ--------------------------------------------------------IGQAAY 147 (241)
T ss_dssp SCSEEEEEECCTHHHHCC--------------------------------------------------------TTCHHH
T ss_pred cCceeeeeecchhhccCC--------------------------------------------------------CCchhh
Confidence 133589999997653211 224579
Q ss_pred HHHHHHHHHHHHHh-----hcCCcEEEEecCccccCCCCCCCcccccccccHHHHHHhhcCCceeeccCCCceeeeeeHH
Q 010075 232 VFTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVD 306 (519)
Q Consensus 232 ~~sK~~aE~lv~~~-----~~~lp~~IvRPs~V~g~~~~p~~gw~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~d~vpVD 306 (519)
+.||+..+.+.+.. ..++.+..|-||.|-.+..... ............. +.+ -+.-.+
T Consensus 148 ~asKaal~~lt~~lA~ela~~gIrVN~V~PG~i~T~~~~~~---------~~~~~~~~~~~~~--~~~------R~g~pe 210 (241)
T d1uaya_ 148 AASKGGVVALTLPAARELAGWGIRVVTVAPGLFDTPLLQGL---------PEKAKASLAAQVP--FPP------RLGRPE 210 (241)
T ss_dssp HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSCSSHHHHTS---------CHHHHHHHHTTCC--SSC------SCCCHH
T ss_pred HHHHHHHHHHHHHHHHHHhhcCCceeeecCCcccccccchh---------hhhHHHHHHhcCC--CCC------CCcCHH
Confidence 99999999888754 4579999999999865432111 0111111111110 001 134578
Q ss_pred HHHHHHHHHHHHhccCCCCCcEEEecCCC
Q 010075 307 MVVNAMIVAMVAHAKQPSDANIYHVGSSL 335 (519)
Q Consensus 307 dva~aii~a~~~~~~~~~~~~iyni~s~~ 335 (519)
|||++++.++... --.+++.++.+|-
T Consensus 211 dvA~~v~fL~s~~---~iTG~~i~VDGG~ 236 (241)
T d1uaya_ 211 EYAALVLHILENP---MLNGEVVRLDGAL 236 (241)
T ss_dssp HHHHHHHHHHHCT---TCCSCEEEESTTC
T ss_pred HHHHHHHHHHhCC---CCCCCEEEECCcc
Confidence 9999999888522 2247888888774
|
| >d2h7ma1 c.2.1.2 (A:2-269) Enoyl-ACP reductase {Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]
Probab=99.18 E-value=1.2e-10 Score=111.58 Aligned_cols=237 Identities=14% Similarity=0.022 Sum_probs=136.6
Q ss_pred hhcCCCEEEEeCCcc--HHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCC
Q 010075 8 EFLENKTILVSGVTG--FVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISE 85 (519)
Q Consensus 8 ~~~~~k~VlITGaTG--FlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~ 85 (519)
..++||+++||||+| .||.+++++|++.| .+|++..|++.. ..+++. ++ ...
T Consensus 2 ~~l~gK~~lItGaag~~GIG~aiA~~la~~G---a~Vil~~~~~~~--~~~~~~-------------~~--------~~~ 55 (268)
T d2h7ma1 2 GLLDGKRILVSGIITDSSIAFHIARVAQEQG---AQLVLTGFDRLR--LIQRIT-------------DR--------LPA 55 (268)
T ss_dssp CTTTTCEEEECCCSSTTCHHHHHHHHHHHTT---CEEEEEECSCHH--HHHHHH-------------TT--------SSS
T ss_pred CCCCCCEEEEECCCCCCHHHHHHHHHHHHcC---CEEEEEeCChHH--HHHHHH-------------HH--------cCC
Confidence 357899999999765 59999999999999 678888876521 112222 11 235
Q ss_pred ceEEEeccCCCCCCCCChhhhHHHHh---cCccEEEEcCccCCc---------c---ccHHHHHHHhHHHHHHHHHHHHh
Q 010075 86 KITFVPGDISSEDLGLKDSNLKEELW---NELDIMVNSAAITKF---------D---ERYDVAFGINTLGVIHLVNFAKK 150 (519)
Q Consensus 86 ~v~~v~gDl~~~~lgls~~~~~~~l~---~~vdiViH~Aa~v~f---------~---~~~~~~~~~Nv~gt~~ll~~a~~ 150 (519)
+...+++|++++..--+..+.....+ ..+|+++|+|+.... + +.+...+.+|+.+.......+..
T Consensus 56 ~~~~~~~dv~~~~~~~~~~~~v~~~~~~~~~ld~~i~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 135 (268)
T d2h7ma1 56 KAPLLELDVQNEEHLASLAGRVTEAIGAGNKLDGVVHSIGFMPQTGMGINPFFDAPYADVSKGIHISAYSYASMAKALLP 135 (268)
T ss_dssp CCCEEECCTTCHHHHHHHHHHHHHHHCTTCCEEEEEECCCCCCGGGSTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGG
T ss_pred ceeeEeeecccccccccccchhhhccccCCCcceeeecccccCccccccccccccchhhhhhhhhhhhhHHHHHHHHHhh
Confidence 67789999996321000011111122 358999999996421 1 23444566777777777666665
Q ss_pred ccCCceEEEEecceeecCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcH
Q 010075 151 CVKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNT 230 (519)
Q Consensus 151 ~~~l~~~V~vSTa~v~~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~ 230 (519)
..+-...+.++|....... +....
T Consensus 136 ~~~~~~~i~~~s~~~~~~~--------------------------------------------------------p~~~~ 159 (268)
T d2h7ma1 136 IMNPGGSIVGMDFDPSRAM--------------------------------------------------------PAYNW 159 (268)
T ss_dssp GEEEEEEEEEEECCCSSCC--------------------------------------------------------TTTHH
T ss_pred hcccccccccccccccccC--------------------------------------------------------cccch
Confidence 4333344444443322110 23467
Q ss_pred HHHHHHHHHHHHHHh-----hcCCcEEEEecCccccCCCCCCCcccccc---cccHHHHHHhhcCCceeeccCCCceeee
Q 010075 231 YVFTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDL---KTINTLFVASAQGNLRCLVGETKVIMDV 302 (519)
Q Consensus 231 Y~~sK~~aE~lv~~~-----~~~lp~~IvRPs~V~g~~~~p~~gw~~~~---~~~~~~i~~~~~g~~~~~~~~~~~~~d~ 302 (519)
|+.+|+..+.+.+.. ..++.+..|.||.|-.+..+.+.+..... .....+........ + ..+-+
T Consensus 160 y~~sK~a~~~ltr~lA~e~~~~gIrVN~V~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----p----l~rr~ 231 (268)
T d2h7ma1 160 MTVAKSALESVNRFVAREAGKYGVRSNLVAAGPIRTLAMSAIVGGALGEEAGAQIQLLEEGWDQRA----P----IGWNM 231 (268)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCHHHHHHHTTTTCHHHHHHHHHHHHHHHHHC----T----TCCCT
T ss_pred hhccccchhhccccchhhhhccCCcceEEecCCCCChhhhhhccchhhhhhccchHHHHHHHHhcC----C----CCCCC
Confidence 999999999988754 45799999999988764321111100000 00001111111100 0 00123
Q ss_pred eeHHHHHHHHHHHHHHhccCCCCCcEEEecCCC
Q 010075 303 IPVDMVVNAMIVAMVAHAKQPSDANIYHVGSSL 335 (519)
Q Consensus 303 vpVDdva~aii~a~~~~~~~~~~~~iyni~s~~ 335 (519)
...+|+|+++..++.. ....-.+++..+.+|-
T Consensus 232 ~~p~dva~~v~fL~Sd-~a~~iTG~~i~vDGG~ 263 (268)
T d2h7ma1 232 KDATPVAKTVCALLSD-WLPATTGDIIYADGGA 263 (268)
T ss_dssp TCCHHHHHHHHHHHSS-SCTTCCSEEEEESTTG
T ss_pred CCHHHHHHHHHHHhCc-hhcCccCCEEEECcCc
Confidence 4578999999988853 2222347888888774
|
| >d1d7oa_ c.2.1.2 (A:) Enoyl-ACP reductase {Oil seed rape (Brassica napus) [TaxId: 3708]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Oil seed rape (Brassica napus) [TaxId: 3708]
Probab=99.12 E-value=7.1e-10 Score=107.70 Aligned_cols=243 Identities=12% Similarity=0.086 Sum_probs=137.2
Q ss_pred cCCCEEEEeCCcc--HHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCce
Q 010075 10 LENKTILVSGVTG--FVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKI 87 (519)
Q Consensus 10 ~~~k~VlITGaTG--FlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v 87 (519)
++||++|||||+| .||+++++.|++.| .+|++..|+.........+.. ...+ .+.....-...-..++
T Consensus 6 L~gK~alVTGass~~GIG~aiA~~la~~G---a~Vvi~~~~~~~~~~~~~~~~-----~~~~--~~~~~~~~~~~~~~~~ 75 (297)
T d1d7oa_ 6 LRGKRAFIAGIADDNGYGWAVAKSLAAAG---AEILVGTWVPALNIFETSLRR-----GKFD--QSRVLPDGSLMEIKKV 75 (297)
T ss_dssp CTTCEEEEECCSSSSSHHHHHHHHHHHTT---CEEEEEEEHHHHHHHHHHHHT-----TTTT--GGGBCTTSSBCCEEEE
T ss_pred CCCCEEEEECCCCCchHHHHHHHHHHHCC---CEEEEEeCchhhhhhHHHHHH-----hhhh--hhhhhhhhhhhhhhhh
Confidence 6899999999987 89999999999999 678888886432221111110 0000 0000000000001234
Q ss_pred EEEeccCCCCCCCC---------------ChhhhHH---HHhcCccEEEEcCccCC-----c----cccHHHHHHHhHHH
Q 010075 88 TFVPGDISSEDLGL---------------KDSNLKE---ELWNELDIMVNSAAITK-----F----DERYDVAFGINTLG 140 (519)
Q Consensus 88 ~~v~gDl~~~~lgl---------------s~~~~~~---~l~~~vdiViH~Aa~v~-----f----~~~~~~~~~~Nv~g 140 (519)
..+..++.++..-. +..+..+ ....++|++||+||... + .+.+...+++|+.+
T Consensus 76 ~~~~~~~~~~~~~~~dv~~~~~~~~~~~~~~~~~~~~~~~~~G~iDilVnnAg~~~~~~~~~~~~~~~~~~~~~~vn~~~ 155 (297)
T d1d7oa_ 76 YPLDAVFDNPEDVPEDVKANKRYAGSSNWTVQEAAECVRQDFGSIDILVHSLANGPEVSKPLLETSRKGYLAAISASSYS 155 (297)
T ss_dssp EEECTTCCSGGGSCHHHHTSHHHHHCCCCSHHHHHHHHHHHHSCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHH
T ss_pred hhhhhhccccccchhhhhhhhhhhhccHHHHHHHHHHHHHHhCCCcccccccccccccccchhhhhcccccccccchhhh
Confidence 44444443321110 0111221 22357999999998642 2 14577889999999
Q ss_pred HHHHHHHHHhcc-CCceEEEEecceeecCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccc
Q 010075 141 VIHLVNFAKKCV-KLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGT 219 (519)
Q Consensus 141 t~~ll~~a~~~~-~l~~~V~vSTa~v~~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~ 219 (519)
+..+.+.+.... .-...+.+|+.......
T Consensus 156 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~-------------------------------------------------- 185 (297)
T d1d7oa_ 156 FVSLLSHFLPIMNPGGASISLTYIASERII-------------------------------------------------- 185 (297)
T ss_dssp HHHHHHHHGGGEEEEEEEEEEECGGGTSCC--------------------------------------------------
T ss_pred hhhhhhHHHHHhhcCCcceeeeehhhcccc--------------------------------------------------
Confidence 999998876532 22334555544322110
Q ss_pred cccccCCCCcHHHHHHHHHHHHHHHh------hcCCcEEEEecCccccCCCCCCCcccccccccHHHHHHhhcCCceeec
Q 010075 220 ERAKLHGWPNTYVFTKTMGEMLMQQS------KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLV 293 (519)
Q Consensus 220 ~~~~~~~~~n~Y~~sK~~aE~lv~~~------~~~lp~~IvRPs~V~g~~~~p~~gw~~~~~~~~~~i~~~~~g~~~~~~ 293 (519)
......|..+|+..+.+.+.. ..++.+..+.||.|..+..... .....+........ |
T Consensus 186 -----~~~~~~y~~aKaa~~~l~~~~a~e~~~~~gIrvN~I~PG~i~T~~~~~~-------~~~~~~~~~~~~~~----P 249 (297)
T d1d7oa_ 186 -----PGYGGGMSSAKAALESDTRVLAFEAGRKQNIRVNTISAGPLGSRAAKAI-------GFIDTMIEYSYNNA----P 249 (297)
T ss_dssp -----TTCTTTHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCBCCCSSCC-------SHHHHHHHHHHHHS----S
T ss_pred -----cccccceecccccccccccccchhccccceEEecccccccccchhhhhc-------cCCHHHHHHHHhCC----C
Confidence 023456999998888777643 3589999999999977644211 11112222222111 1
Q ss_pred cCCCceeeeeeHHHHHHHHHHHHHHhccCCCCCcEEEecCC
Q 010075 294 GETKVIMDVIPVDMVVNAMIVAMVAHAKQPSDANIYHVGSS 334 (519)
Q Consensus 294 ~~~~~~~d~vpVDdva~aii~a~~~~~~~~~~~~iyni~s~ 334 (519)
..-+.-.+|+|++++.++.... .--.+++..+.+|
T Consensus 250 -----lgR~~~peevA~~v~fL~S~~a-~~itGq~i~vDGG 284 (297)
T d1d7oa_ 250 -----IQKTLTADEVGNAAAFLVSPLA-SAITGATIYVDNG 284 (297)
T ss_dssp -----SCCCBCHHHHHHHHHHHTSGGG-TTCCSCEEEESTT
T ss_pred -----CCCCCCHHHHHHHHHHHhCchh-cCCcCceEEECcC
Confidence 1124568899999998886432 2223678888766
|
| >d1uh5a_ c.2.1.2 (A:) Enoyl-ACP reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]
Probab=99.10 E-value=1.4e-09 Score=107.59 Aligned_cols=185 Identities=11% Similarity=0.114 Sum_probs=110.8
Q ss_pred CCCEEEEeC--CccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceE
Q 010075 11 ENKTILVSG--VTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKIT 88 (519)
Q Consensus 11 ~~k~VlITG--aTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~ 88 (519)
.+|.+|||| ++..||+++++.|.+.| .+|++..|+............+ -++ .+.-.. .........
T Consensus 1 n~kVAlITGaa~s~GIG~aiA~~la~~G---A~V~i~~~~~~~~~~~~~~~~~-----~~~---~~~~~~-~~~~~~~~~ 68 (329)
T d1uh5a_ 1 NEDICFIAGIGDTNGYGWGIAKELSKRN---VKIIFGIWPPVYNIFMKNYKNG-----KFD---NDMIID-KDKKMNILD 68 (329)
T ss_dssp CCCEEEEECCSSSSSHHHHHHHHHHHTT---CEEEEEECGGGHHHHHHHHHTT-----TTT---GGGEET-TTEECCEEE
T ss_pred CCcEEEEeCCCCCChHHHHHHHHHHHcC---CEEEEEeCchhhhhhhHHHHHH-----hhh---hHHHHH-HHhhhhhhh
Confidence 378999999 55689999999999999 6778877765433222111100 000 000000 000011222
Q ss_pred EEeccCCCCCCC-------------C----ChhhhH---HHHhcCccEEEEcCccCC-----c----cccHHHHHHHhHH
Q 010075 89 FVPGDISSEDLG-------------L----KDSNLK---EELWNELDIMVNSAAITK-----F----DERYDVAFGINTL 139 (519)
Q Consensus 89 ~v~gDl~~~~lg-------------l----s~~~~~---~~l~~~vdiViH~Aa~v~-----f----~~~~~~~~~~Nv~ 139 (519)
....|+...... + +..... .+...++|++||+||... + .+.++..+++|+.
T Consensus 69 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~iDilVnnag~~~~~~~~~~~~~~~~~~~~~~vn~~ 148 (329)
T d1uh5a_ 69 MLPFDASFDTANDIDEETKNNKRYNMLQNYTIEDVANLIHQKYGKINMLVHSLANAKEVQKDLLNTSRKGYLDALSKSSY 148 (329)
T ss_dssp EEECCTTCSSGGGCCHHHHTSHHHHTCCCCSHHHHHHHHHHHHCCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTH
T ss_pred cccccceehhhcccchhhhhhhhhhhhhHHHHHHHHHHHHHHhCCCCeeccccccccccCCChhhhhhhhhhhhcccchh
Confidence 333333211000 0 011111 123468999999998642 2 2568888999999
Q ss_pred HHHHHHHHHHhc-cCCceEEEEecceeecCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhcc
Q 010075 140 GVIHLVNFAKKC-VKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLG 218 (519)
Q Consensus 140 gt~~ll~~a~~~-~~l~~~V~vSTa~v~~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg 218 (519)
|+..+.+.+... ++-.++|.+||....... +
T Consensus 149 ~~~~~~k~~~~~m~~~GsIv~iss~~~~~~~---------p--------------------------------------- 180 (329)
T d1uh5a_ 149 SLISLCKYFVNIMKPQSSIISLTYHASQKVV---------P--------------------------------------- 180 (329)
T ss_dssp HHHHHHHHHGGGEEEEEEEEEEECGGGTSCC---------T---------------------------------------
T ss_pred HHHHHHHHHHhhcccccccccceeehhcccc---------c---------------------------------------
Confidence 999988887653 444678888875432211 0
Q ss_pred ccccccCCCCcHHHHHHHHHHHHHHHh----h--cCCcEEEEecCccccC
Q 010075 219 TERAKLHGWPNTYVFTKTMGEMLMQQS----K--ENLSLVIIRPTVVSGT 262 (519)
Q Consensus 219 ~~~~~~~~~~n~Y~~sK~~aE~lv~~~----~--~~lp~~IvRPs~V~g~ 262 (519)
++...|+.+|+..|.+++.. . .++++..|.||.|-.+
T Consensus 181 -------~y~~~y~asKaal~~ltr~lA~Ela~~~gIRVNaI~PG~i~T~ 223 (329)
T d1uh5a_ 181 -------GYGGGMSSAKAALESDTRVLAYHLGRNYNIRINTISAGPLKSR 223 (329)
T ss_dssp -------TCTTTHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCT
T ss_pred -------ccchhhhhhhccccccchhhHHHHhcccCcEEEEEecCcccch
Confidence 23456999999999888754 2 3899999999988653
|
| >d1e7wa_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Leishmania major [TaxId: 5664]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dihydropteridin reductase (pteridine reductase) species: Leishmania major [TaxId: 5664]
Probab=99.07 E-value=1.7e-08 Score=96.89 Aligned_cols=224 Identities=14% Similarity=0.080 Sum_probs=133.4
Q ss_pred CEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEEec
Q 010075 13 KTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVPG 92 (519)
Q Consensus 13 k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v~g 92 (519)
..++||||++.||++++++|++.| .+|++..|+... ..+.+.++ +.++. ......+.+
T Consensus 3 pVAlITGas~GIG~aiA~~la~~G---a~V~i~~~~~~~--~~~~~~~~---------l~~~~--------~~~~~~~~~ 60 (284)
T d1e7wa_ 3 PVALVTGAAKRLGRSIAEGLHAEG---YAVCLHYHRSAA--EANALSAT---------LNARR--------PNSAITVQA 60 (284)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHTT---CEEEEEESSCHH--HHHHHHHH---------HHHHS--------TTCEEEEEC
T ss_pred CEEEEeCCCCHHHHHHHHHHHHcC---CEEEEEeCCCHH--HHHHHHHH---------HHhhc--------CCceEEEEe
Confidence 368999999999999999999999 677877765422 22223221 12222 244555555
Q ss_pred cCCCCC----------CCCChhhhHHHH-------hcCccEEEEcCccCCcc-------c--------------cHHHHH
Q 010075 93 DISSED----------LGLKDSNLKEEL-------WNELDIMVNSAAITKFD-------E--------------RYDVAF 134 (519)
Q Consensus 93 Dl~~~~----------lgls~~~~~~~l-------~~~vdiViH~Aa~v~f~-------~--------------~~~~~~ 134 (519)
|..... ..+++.+..+++ ..++|++||+||..... + .+...+
T Consensus 61 d~~~~~~~~~~~~~~~~dv~~~~~v~~~~~~~~~~~G~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 140 (284)
T d1e7wa_ 61 DLSNVATAPVSGADGSAPVTLFTRCAELVAACYTHWGRCDVLVNNASSFYPTPLLRNDEDGHEPCVGDREAMETATADLF 140 (284)
T ss_dssp CCSSSCBCCCC----CCCBCHHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCCCC-------------HHHHHHHHHHH
T ss_pred ecccccccccccccccccCCCHHHHHHHHHHHHHHhCCCCEEEecCCccCCCchhhCCHHHhhhhhhhHHHHHHHHHHHH
Confidence 543321 112244444343 25799999999975321 1 122357
Q ss_pred HHhHHHHHHHHHHHHhc---------cCCceEEEEecceeecCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCC
Q 010075 135 GINTLGVIHLVNFAKKC---------VKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGA 205 (519)
Q Consensus 135 ~~Nv~gt~~ll~~a~~~---------~~l~~~V~vSTa~v~~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~ 205 (519)
.+|+.++..+.+.+.+. .+...++.+|+.......
T Consensus 141 ~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~ii~~~s~~~~~~~------------------------------------ 184 (284)
T d1e7wa_ 141 GSNAIAPYFLIKAFAHRVAGTPAKHRGTNYSIINMVDAMTNQPL------------------------------------ 184 (284)
T ss_dssp HHHTHHHHHHHHHHHHHHHTSCGGGSCSCEEEEEECCTTTTSCC------------------------------------
T ss_pred hhheeeeeeeeccccchhhhhHHHhcCCCCcccccccccccCCc------------------------------------
Confidence 88999998888776432 122356666665432211
Q ss_pred ChHHHHHHHhhccccccccCCCCcHHHHHHHHHHHHHHHh-----hcCCcEEEEecCccccCCCCCCCcccccccccHHH
Q 010075 206 PQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTL 280 (519)
Q Consensus 206 ~~~~~~~~~~~lg~~~~~~~~~~n~Y~~sK~~aE~lv~~~-----~~~lp~~IvRPs~V~g~~~~p~~gw~~~~~~~~~~ 280 (519)
.....|+.||+..+.+.+.. ..++.+..|-||.+-.... .....
T Consensus 185 --------------------~~~~~Y~asKaal~~lt~~lA~el~~~gIrvN~I~PG~t~~~~~-----------~~~~~ 233 (284)
T d1e7wa_ 185 --------------------LGYTIYTMAKGALEGLTRSAALELAPLQIRVNGVGPGLSVLVDD-----------MPPAV 233 (284)
T ss_dssp --------------------TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCCGGG-----------SCHHH
T ss_pred --------------------cceeeeccccccchhhhHHHHHHhCCcccccccccccccccccc-----------CCHHH
Confidence 12357999999999888755 5579999999986322111 11223
Q ss_pred HHHhhcCCceeeccCCCceeeeeeHHHHHHHHHHHHHHhccCCCCCcEEEecCC
Q 010075 281 FVASAQGNLRCLVGETKVIMDVIPVDMVVNAMIVAMVAHAKQPSDANIYHVGSS 334 (519)
Q Consensus 281 i~~~~~g~~~~~~~~~~~~~d~vpVDdva~aii~a~~~~~~~~~~~~iyni~s~ 334 (519)
......... .. .-+...+|+|++++.++.... .--.|+++.+.+|
T Consensus 234 ~~~~~~~~p----l~----~R~~~peeiA~~v~fL~S~~s-~~itG~~i~VDGG 278 (284)
T d1e7wa_ 234 WEGHRSKVP----LY----QRDSSAAEVSDVVIFLCSSKA-KYITGTCVKVDGG 278 (284)
T ss_dssp HHHHHTTCT----TT----TSCBCHHHHHHHHHHHHSGGG-TTCCSCEEEESTT
T ss_pred HHHHHhcCC----CC----CCCCCHHHHHHHHHHHhCchh-cCccCCeEEECcC
Confidence 333222211 00 124568899999998886432 2224788888877
|
| >d1mxha_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Trypanosoma cruzi [TaxId: 5693]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dihydropteridin reductase (pteridine reductase) species: Trypanosoma cruzi [TaxId: 5693]
Probab=98.99 E-value=7.2e-08 Score=91.40 Aligned_cols=221 Identities=13% Similarity=0.116 Sum_probs=129.3
Q ss_pred CEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEEec
Q 010075 13 KTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVPG 92 (519)
Q Consensus 13 k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v~g 92 (519)
.+++||||++.||++++++|++.| .+|++..|+.... .+++.+++ .+.. ..+...+..
T Consensus 2 ~vAlVTGas~GIG~aia~~la~~G---~~Vvi~~r~~~~~--~~~~~~~~---------~~~~--------~~~~~~~~~ 59 (266)
T d1mxha_ 2 PAAVITGGARRIGHSIAVRLHQQG---FRVVVHYRHSEGA--AQRLVAEL---------NAAR--------AGSAVLCKG 59 (266)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHTT---CEEEEEESSCHHH--HHHHHHHH---------HHHS--------TTCEEEEEC
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCC---CEEEEEECCchHH--HHHHHHHH---------Hhhc--------CCceEEEec
Confidence 368999999999999999999999 6889999875322 22222211 1111 245666666
Q ss_pred cCCCCCCCCChhhhHHH-------HhcCccEEEEcCccCCcc------------------ccHHHHHHHhHHHHHHHHHH
Q 010075 93 DISSEDLGLKDSNLKEE-------LWNELDIMVNSAAITKFD------------------ERYDVAFGINTLGVIHLVNF 147 (519)
Q Consensus 93 Dl~~~~lgls~~~~~~~-------l~~~vdiViH~Aa~v~f~------------------~~~~~~~~~Nv~gt~~ll~~ 147 (519)
|+.+... ..+.... ...++|++||+||..... .........|+.+.......
T Consensus 60 ~~~~~~~---~~~~~~~~~~~~~~~~g~iDilvnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 136 (266)
T d1mxha_ 60 DLSLSSS---LLDCCEDIIDCSFRAFGRCDVLVNNASAYYPTPLLPGDDTNGAADAKPIDAQVAELFGSNAVAPLFLIRA 136 (266)
T ss_dssp CCSSSTT---HHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCSCC-----------CHHHHHHHHHHHHTHHHHHHHHH
T ss_pred ccccchh---HHHHHHHHHHHHHHHhCCCCEEEECCccCCCCcccccccccchhcccccccccccccccccccccchhhh
Confidence 6653211 2222222 235799999999975311 12233455566666655555
Q ss_pred HHhcc--------CCceEEEEecceeecCcCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccc
Q 010075 148 AKKCV--------KLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGT 219 (519)
Q Consensus 148 a~~~~--------~l~~~V~vSTa~v~~~~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~ 219 (519)
+.... ....++.+|+......
T Consensus 137 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------------------------------------------- 165 (266)
T d1mxha_ 137 FARRQGEGGAWRSRNLSVVNLCDAMTDLP--------------------------------------------------- 165 (266)
T ss_dssp HHHTC-------CCCEEEEEECCGGGGSC---------------------------------------------------
T ss_pred hccccccccccccccccchhhhhcccccc---------------------------------------------------
Confidence 44321 1123334443322111
Q ss_pred cccccCCCCcHHHHHHHHHHHHHHHh-----hcCCcEEEEecCccccCCCCCCCcccccccccHHHHHHhhcCCceeecc
Q 010075 220 ERAKLHGWPNTYVFTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVG 294 (519)
Q Consensus 220 ~~~~~~~~~n~Y~~sK~~aE~lv~~~-----~~~lp~~IvRPs~V~g~~~~p~~gw~~~~~~~~~~i~~~~~g~~~~~~~ 294 (519)
.+....|+.||+..+.+.+.. ..++.+..|.||.|..+...+ ......+..... .+
T Consensus 166 -----~~~~~~Y~asKaal~~lt~~lA~e~~~~gIrVN~I~PG~i~t~~~~~-----------~~~~~~~~~~~p---l~ 226 (266)
T d1mxha_ 166 -----LPGFCVYTMAKHALGGLTRAAALELAPRHIRVNAVAPGLSLLPPAMP-----------QETQEEYRRKVP---LG 226 (266)
T ss_dssp -----CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSCCSSSC-----------HHHHHHHHTTCT---TT
T ss_pred -----CcchhhhhhhHHHHhhhHHHHHHHhCccCcEEEEeccCcEeccccCC-----------HHHHHHHHhcCC---CC
Confidence 023467999999999888754 457999999999876543211 122222222111 01
Q ss_pred CCCceeeeeeHHHHHHHHHHHHHHhccCCCCCcEEEecCC
Q 010075 295 ETKVIMDVIPVDMVVNAMIVAMVAHAKQPSDANIYHVGSS 334 (519)
Q Consensus 295 ~~~~~~d~vpVDdva~aii~a~~~~~~~~~~~~iyni~s~ 334 (519)
+-+...+|||++++.++..... --.|+++++.+|
T Consensus 227 -----r~~~~peeva~~v~fL~s~~s~-~itG~~i~vDGG 260 (266)
T d1mxha_ 227 -----QSEASAAQIADAIAFLVSKDAG-YITGTTLKVDGG 260 (266)
T ss_dssp -----SCCBCHHHHHHHHHHHHSGGGT-TCCSCEEEESTT
T ss_pred -----CCCCCHHHHHHHHHHHhCchhC-CccCCeEEECcc
Confidence 1124578999999998864322 224788888877
|
| >d1fjha_ c.2.1.2 (A:) 3-alpha-hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 3-alpha-hydroxysteroid dehydrogenase species: Comamonas testosteroni [TaxId: 285]
Probab=98.84 E-value=1.4e-07 Score=89.01 Aligned_cols=237 Identities=11% Similarity=0.060 Sum_probs=124.2
Q ss_pred CEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEEec
Q 010075 13 KTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVPG 92 (519)
Q Consensus 13 k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v~g 92 (519)
|.|+||||+|.||++++++|++.| .+|+++.|+.... ..
T Consensus 2 kVvlITGas~GIG~aiA~~la~~G---a~V~~~~~~~~~~--------------------------------------~~ 40 (257)
T d1fjha_ 2 SIIVISGCATGIGAATRKVLEAAG---HQIVGIDIRDAEV--------------------------------------IA 40 (257)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTT---CEEEEEESSSSSE--------------------------------------EC
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCC---CEEEEEECChHHH--------------------------------------HH
Confidence 789999999999999999999999 6788888864321 22
Q ss_pred cCCCCCCCCC-hhhhHHHHhcCccEEEEcCccCCccccHHHHHHHhHHHHHHHHHHHHhc---cCCceEEEEecceeecC
Q 010075 93 DISSEDLGLK-DSNLKEELWNELDIMVNSAAITKFDERYDVAFGINTLGVIHLVNFAKKC---VKLKVFVHVSTAYVAGE 168 (519)
Q Consensus 93 Dl~~~~lgls-~~~~~~~l~~~vdiViH~Aa~v~f~~~~~~~~~~Nv~gt~~ll~~a~~~---~~l~~~V~vSTa~v~~~ 168 (519)
|+.+..-... ..+........+|+++|+|+.....+.+.....+|..+...+.+..... ........+++......
T Consensus 41 d~~~~~~~~~~~~~~~~~~~~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 120 (257)
T d1fjha_ 41 DLSTAEGRKQAIADVLAKCSKGMDGLVLCAGLGPQTKVLGNVVSVNYFGATELMDAFLPALKKGHQPAAVVISSVASAHL 120 (257)
T ss_dssp CTTSHHHHHHHHHHHHTTCTTCCSEEEECCCCCTTCSSHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGGSS
T ss_pred HhcCHHHHHHHHHHHHHHhCCCCcEEEEcCCCCCcHHHHHHHHHHHHHHHHHHHHHhhhhhhhhccCcceeeeeccccch
Confidence 3332100000 0000001123599999999987777788888899999888776654321 13344555554332211
Q ss_pred cCCeeecccCCCCCCCChHHHHHHHHHHHhhhhhcCCChHHHHHHHhhccccccccCCCCcHHHHHHHHHHHHHHHh---
Q 010075 169 RTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLMQQS--- 245 (519)
Q Consensus 169 ~~~~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~n~Y~~sK~~aE~lv~~~--- 245 (519)
.. .. .+...... .-..-.+.......+ ..+..-.|+.||+..+.+.+..
T Consensus 121 ~~----~~-----~~~~~~~~--------------~g~~~~i~s~~~~~~-----~~~~~~~Y~asKaal~~ltr~lA~e 172 (257)
T d1fjha_ 121 AF----DK-----NPLALALE--------------AGEEAKARAIVEHAG-----EQGGNLAYAGSKNALTVAVRKRAAA 172 (257)
T ss_dssp CG----GG-----CTTHHHHH--------------HTCHHHHHHHHHTCC-----TTHHHHHHHHHHHHHHHHHHHTHHH
T ss_pred hh----hh-----hhhhhhcc--------------CCcEEEEeeehhccC-----CCcchHHHHHHhhhhhccccccccc
Confidence 00 00 00000000 000000000000000 0001125999999999998865
Q ss_pred --hcCCcEEEEecCccccCCCCCCCcccccccccHHHHHHhhcCCceeeccCCCceeeeeeHHHHHHHHHHHHHHhccCC
Q 010075 246 --KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMIVAMVAHAKQP 323 (519)
Q Consensus 246 --~~~lp~~IvRPs~V~g~~~~p~~gw~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~d~vpVDdva~aii~a~~~~~~~~ 323 (519)
..++++..|-||.|-.+..+. .+.+. .......+.. ....-+...+|+|+++..++.... .-
T Consensus 173 l~~~gIrVN~I~PG~i~T~~~~~--~~~~~-----~~~~~~~~~~--------~PlgR~g~p~eva~~v~fL~S~~s-~~ 236 (257)
T d1fjha_ 173 WGEAGVRLNTIAPGATETPLLQA--GLQDP-----RYGESIAKFV--------PPMGRRAEPSEMASVIAFLMSPAA-SY 236 (257)
T ss_dssp HHHTTCEEEEEEECC----------------------------CC--------CSTTSCCCTHHHHHHHHHHTSGGG-TT
T ss_pred cccccccccccccCCcCChhHHh--hcCCH-----HHHHHHHhcC--------CCCCCCcCHHHHHHHHHHHhCchh-CC
Confidence 567999999999986653211 00000 0011111100 011124557999999999886432 22
Q ss_pred CCCcEEEecCC
Q 010075 324 SDANIYHVGSS 334 (519)
Q Consensus 324 ~~~~iyni~s~ 334 (519)
-.|++..+.+|
T Consensus 237 itG~~i~vDGG 247 (257)
T d1fjha_ 237 VHGAQIVIDGG 247 (257)
T ss_dssp CCSCEEEESTT
T ss_pred ccCceEEeCCC
Confidence 24778888776
|
| >d1luaa1 c.2.1.7 (A:98-288) Methylene-tetrahydromethanopterin dehydrogenase {Methylobacterium extorquens [TaxId: 408]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Methylene-tetrahydromethanopterin dehydrogenase species: Methylobacterium extorquens [TaxId: 408]
Probab=98.69 E-value=1.9e-08 Score=91.11 Aligned_cols=84 Identities=15% Similarity=0.136 Sum_probs=62.1
Q ss_pred hcCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceE
Q 010075 9 FLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKIT 88 (519)
Q Consensus 9 ~~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~ 88 (519)
.++||+|+||||+|.||+.+++.|++.| .+|++..|+.... +.+.++ +.+. .++.
T Consensus 20 ~l~gK~vlItGasgGIG~~ia~~la~~G---~~V~~~~r~~~~~---~~~~~~---------~~~~----------~~~~ 74 (191)
T d1luaa1 20 SVKGKKAVVLAGTGPVGMRSAALLAGEG---AEVVLCGRKLDKA---QAAADS---------VNKR----------FKVN 74 (191)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHTT---CEEEEEESSHHHH---HHHHHH---------HHHH----------HTCC
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHhhc---cchhhcccchHHH---HHHHHH---------HHhc----------cchh
Confidence 4689999999999999999999999998 6889999985321 111111 1111 2445
Q ss_pred EEeccCCCCCCCCChhhhHHHHhcCccEEEEcCccC
Q 010075 89 FVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAIT 124 (519)
Q Consensus 89 ~v~gDl~~~~lgls~~~~~~~l~~~vdiViH~Aa~v 124 (519)
.+.+|++ +.+..++..+++|+|||+|+..
T Consensus 75 ~~~~d~~-------~~~~~~~~~~~iDilin~Ag~g 103 (191)
T d1luaa1 75 VTAAETA-------DDASRAEAVKGAHFVFTAGAIG 103 (191)
T ss_dssp CEEEECC-------SHHHHHHHTTTCSEEEECCCTT
T ss_pred hhhhhcc-------cHHHHHHHhcCcCeeeecCccc
Confidence 6788998 4444567889999999999863
|
| >d1mlda1 c.2.1.5 (A:1-144) Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Pig (Sus scrofa) [TaxId: 9823]
Probab=97.15 E-value=0.0011 Score=56.12 Aligned_cols=115 Identities=17% Similarity=0.190 Sum_probs=74.1
Q ss_pred EEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEEecc
Q 010075 14 TILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVPGD 93 (519)
Q Consensus 14 ~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v~gD 93 (519)
+|.|.||+|.+|+.++-.|... +-+.++.++...+. ..+.+ ++... .-.....+-
T Consensus 2 Kv~IiGA~G~VG~~~A~~l~~~-~~~~elvLiDi~~~---~~~a~--Dl~~~-------------------~~~~~~~~~ 56 (144)
T d1mlda1 2 KVAVLGASGGIGQPLSLLLKNS-PLVSRLTLYDIAHT---PGVAA--DLSHI-------------------ETRATVKGY 56 (144)
T ss_dssp EEEEETTTSTTHHHHHHHHHTC-TTCSEEEEEESSSH---HHHHH--HHTTS-------------------SSSCEEEEE
T ss_pred eEEEECCCChHHHHHHHHHHhC-CccceEEEEecccc---chhhH--HHhhh-------------------hhhcCCCeE
Confidence 7899999999999999877764 45578888876531 11111 11100 111112222
Q ss_pred CCCCCCCCChhhhHHHHhcCccEEEEcCccCCc-cccHHHHHHHhHHHHHHHHHHHHhccCCceEEEEec
Q 010075 94 ISSEDLGLKDSNLKEELWNELDIMVNSAAITKF-DERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVST 162 (519)
Q Consensus 94 l~~~~lgls~~~~~~~l~~~vdiViH~Aa~v~f-~~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V~vST 162 (519)
+. ..+. .+.+++.|+||-+||..+- .++....++.|+...+.+.+.+++. +.+.++.+.|
T Consensus 57 ~~-------~~~~-~~~~~~aDivVitag~~~~~g~sR~~ll~~N~~i~~~i~~~i~~~-~p~~iiivvt 117 (144)
T d1mlda1 57 LG-------PEQL-PDCLKGCDVVVIPAGVPRKPGMTRDDLFNTNATIVATLTAACAQH-CPDAMICIIS 117 (144)
T ss_dssp ES-------GGGH-HHHHTTCSEEEECCSCCCCTTCCGGGGHHHHHHHHHHHHHHHHHH-CTTSEEEECS
T ss_pred Ec-------CCCh-HHHhCCCCEEEECCCcCCCCCCCcchHHHHHHHHHHHHHHHHHhc-CCCeEEEEec
Confidence 22 2232 2556889999999997542 3455667899999999999999887 5566665554
|
| >d2cmda1 c.2.1.5 (A:1-145) Malate dehydrogenase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Escherichia coli [TaxId: 562]
Probab=97.15 E-value=0.0011 Score=55.96 Aligned_cols=112 Identities=18% Similarity=0.154 Sum_probs=69.4
Q ss_pred CEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEEec
Q 010075 13 KTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVPG 92 (519)
Q Consensus 13 k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v~g 92 (519)
|+|.|+||+|.+|+.++-.|....+.+.++.++...+. .. .+.+ ++.+. . .......+.+
T Consensus 1 MKV~IiGaaG~VG~~~a~~l~~~~~~~~el~L~D~~~~-~~-g~a~--Dl~h~---------------~-~~~~~~~~~~ 60 (145)
T d2cmda1 1 MKVAVLGAAGGIGQALALLLKTQLPSGSELSLYDIAPV-TP-GVAV--DLSHI---------------P-TAVKIKGFSG 60 (145)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHHSCTTCEEEEECSSTT-HH-HHHH--HHHTS---------------C-SSCEEEEECS
T ss_pred CEEEEEcCCChHHHHHHHHHHhCCCCCcEEEEeccccc-ch-hHHH--HHHCC---------------c-cccCCcEEEc
Confidence 58999999999999999887655445577777765432 11 1111 11110 0 0112222221
Q ss_pred cCCCCCCCCChhhhHHHHhcCccEEEEcCccCC-ccccHHHHHHHhHHHHHHHHHHHHhccCCceE
Q 010075 93 DISSEDLGLKDSNLKEELWNELDIMVNSAAITK-FDERYDVAFGINTLGVIHLVNFAKKCVKLKVF 157 (519)
Q Consensus 93 Dl~~~~lgls~~~~~~~l~~~vdiViH~Aa~v~-f~~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~ 157 (519)
..++ ..+.+.|+||-+||..+ -.++..+.+..|..-.+.+.+...+. ..+.+
T Consensus 61 ----------~~~~--~~~~~aDvvvitaG~~~k~g~~R~dl~~~N~~i~~~v~~~i~~~-~p~ai 113 (145)
T d2cmda1 61 ----------EDAT--PALEGADVVLISAGVRRKPGMDRSDLFNVNAGIVKNLVQQVAKT-CPKAC 113 (145)
T ss_dssp ----------SCCH--HHHTTCSEEEECCSCCCCTTCCGGGGHHHHHHHHHHHHHHHHHH-CTTSE
T ss_pred ----------CCCc--cccCCCCEEEECCCccCCCCcchhhHHHHHHHHHHHHHHHHHhh-CCCcE
Confidence 1122 34568999999999753 34455667899999999999988876 33333
|
| >d1hyea1 c.2.1.5 (A:1-145) MJ0490, lactate/malate dehydrogenase {Archaeon Methanococcus jannaschii [TaxId: 2190]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: MJ0490, lactate/malate dehydrogenase species: Archaeon Methanococcus jannaschii [TaxId: 2190]
Probab=96.84 E-value=0.011 Score=49.56 Aligned_cols=118 Identities=12% Similarity=0.064 Sum_probs=72.0
Q ss_pred CEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEEec
Q 010075 13 KTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVPG 92 (519)
Q Consensus 13 k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v~g 92 (519)
|+|.|.||+|.+|..++..|+.++ -+.++.++.+.+.-.. .+-+..++.+. .. ....++....+
T Consensus 1 MKV~IiGA~G~VG~~~a~~l~~~~-l~~el~L~D~~~~~~~-~~g~a~Dl~~~---------~~-----~~~~~~~~~~~ 64 (145)
T d1hyea1 1 MKVTIIGASGRVGSATALLLAKEP-FMKDLVLIGREHSINK-LEGLREDIYDA---------LA-----GTRSDANIYVE 64 (145)
T ss_dssp CEEEEETTTSHHHHHHHHHHHTCT-TCCEEEEEECGGGHHH-HHHHHHHHHHH---------HT-----TSCCCCEEEEE
T ss_pred CEEEEECCCChHHHHHHHHHHhCC-cccccccccchhhhHh-hhcccccchhc---------cc-----ccccCCccccC
Confidence 579999999999999999888754 4468888887643211 11111111110 00 00122222211
Q ss_pred cCCCCCCCCChhhhHHHHhcCccEEEEcCccCCc-cccHHHHHHHhHHHHHHHHHHHHhccCCceEE
Q 010075 93 DISSEDLGLKDSNLKEELWNELDIMVNSAAITKF-DERYDVAFGINTLGVIHLVNFAKKCVKLKVFV 158 (519)
Q Consensus 93 Dl~~~~lgls~~~~~~~l~~~vdiViH~Aa~v~f-~~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V 158 (519)
-- .+. ..+.+.|+||-+||..+- .++-...+..|..-.+.+.+...+. ..+.++
T Consensus 65 ~~---------~d~--~~l~~aDvVVitAG~~~~~g~sR~dl~~~Na~iv~~i~~~i~~~-~~~~ii 119 (145)
T d1hyea1 65 SD---------ENL--RIIDESDVVIITSGVPRKEGMSRMDLAKTNAKIVGKYAKKIAEI-CDTKIF 119 (145)
T ss_dssp ET---------TCG--GGGTTCSEEEECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHH-CCCEEE
T ss_pred Cc---------chH--HHhccceEEEEecccccCCCCChhhhhhhhHHHHHHHHHHHhcc-CCCeEE
Confidence 10 111 334689999999997643 4567778999999999999888776 334443
|
| >d1t4ba1 c.2.1.3 (A:1-133,A:355-367) Aspartate beta-semialdehyde dehydrogenase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Aspartate beta-semialdehyde dehydrogenase species: Escherichia coli [TaxId: 562]
Probab=96.69 E-value=0.0014 Score=55.37 Aligned_cols=38 Identities=13% Similarity=0.282 Sum_probs=30.5
Q ss_pred CEEEEeCCccHHHHHHHHHHHHhC-CCccEEEEEEecCC
Q 010075 13 KTILVSGVTGFVAKVFIEKILRVQ-PNVKKLYLFVRAAD 50 (519)
Q Consensus 13 k~VlITGaTGFlG~~Lv~~LL~~g-~~v~~V~~LvR~~~ 50 (519)
|+|.|.||||++|+.+++.|+++. ..+.+++++.+++.
T Consensus 2 kkVaIvGATG~VGqeli~~Ll~~~~~p~~~l~~~~ss~s 40 (146)
T d1t4ba1 2 QNVGFIGWRGMVGSVLMQRMVEERDFDAIRPVFFSTSQL 40 (146)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTGGGGSEEEEEESSST
T ss_pred cEEEEECCccHHHHHHHHHHHhCCCCCeeEEEEeecccc
Confidence 589999999999999999998752 24568888876653
|
| >d1ez4a1 c.2.1.5 (A:16-162) Lactate dehydrogenase {Lactobacillus pentosus [TaxId: 1589]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Lactobacillus pentosus [TaxId: 1589]
Probab=96.60 E-value=0.0074 Score=50.78 Aligned_cols=117 Identities=11% Similarity=0.095 Sum_probs=69.9
Q ss_pred CCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEE
Q 010075 11 ENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFV 90 (519)
Q Consensus 11 ~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v 90 (519)
+.++|.|.|+ |.+|..++..|+..+ -+.+|+++.+.......+ ..++.... . ........
T Consensus 4 ~~~KI~IIGa-G~VG~~~A~~l~~~~-~~~elvL~D~~~~~~~g~---a~Dl~~a~--------------~-~~~~~~~~ 63 (146)
T d1ez4a1 4 NHQKVVLVGD-GAVGSSYAFAMAQQG-IAEEFVIVDVVKDRTKGD---ALDLEDAQ--------------A-FTAPKKIY 63 (146)
T ss_dssp TBCEEEEECC-SHHHHHHHHHHHHHT-CCSEEEEECSSHHHHHHH---HHHHHGGG--------------G-GSCCCEEE
T ss_pred CCCEEEEECC-CHHHHHHHHHHHhcC-CCcEEEEeecccchhHHH---HHHHhccc--------------c-ccCCceEe
Confidence 3579999995 999999999999876 246888888754211110 00111100 0 01223445
Q ss_pred eccCCCCCCCCChhhhHHHHhcCccEEEEcCccCCc-cccHHHHHHHhHHHHHHHHHHHHhccCCceEEEEec
Q 010075 91 PGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF-DERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVST 162 (519)
Q Consensus 91 ~gDl~~~~lgls~~~~~~~l~~~vdiViH~Aa~v~f-~~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V~vST 162 (519)
.+|.. -+.+.|+|+-+|+...- .......+..|+.-.+.+.+...+. +.+.++.+-|
T Consensus 64 ~~d~~--------------~~~~adivvitag~~~~~g~~r~~l~~~N~~i~~~~~~~i~~~-~p~aivivvt 121 (146)
T d1ez4a1 64 SGEYS--------------DCKDADLVVITAGAPQKPGESRLDLVNKNLNILSSIVKPVVDS-GFDGIFLVAA 121 (146)
T ss_dssp ECCGG--------------GGTTCSEEEECCCC----------CHHHHHHHHHHHHHHHHHT-TCCSEEEECS
T ss_pred eccHH--------------HhccccEEEEecccccCCCCCHHHHHHHHHHHHHHHHHHHhhc-CCCcEEEEeC
Confidence 55532 13578999999987543 3455566888999999999888876 5565655544
|
| >d7mdha1 c.2.1.5 (A:23-197) Malate dehydrogenase {Sorghum (Sorghum vulgare), chloroplast [TaxId: 4558]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Sorghum (Sorghum vulgare), chloroplast [TaxId: 4558]
Probab=96.60 E-value=0.018 Score=49.89 Aligned_cols=111 Identities=14% Similarity=0.089 Sum_probs=68.0
Q ss_pred CCCEEEEeCCccHHHHHHHHHHHHhC---CC-ccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCc
Q 010075 11 ENKTILVSGVTGFVAKVFIEKILRVQ---PN-VKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEK 86 (519)
Q Consensus 11 ~~k~VlITGaTGFlG~~Lv~~LL~~g---~~-v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~ 86 (519)
+..+|.||||+|.||..++-.|++.. .+ ...++++..++.... .+-+.-++.+. ....
T Consensus 23 ~~~kV~I~GA~G~Ig~~l~~~La~g~v~g~~~~i~L~L~di~~~~~~-l~g~~mdl~d~-----------------a~~~ 84 (175)
T d7mdha1 23 KLVNIAVSGAAGMISNHLLFKLASGEVFGQDQPIALKLLGSERSFQA-LEGVAMELEDS-----------------LYPL 84 (175)
T ss_dssp CCEEEEEETTTSHHHHHHHHHHHHTTTTCTTCCEEEEEECCGGGHHH-HHHHHHHHHTT-----------------TCTT
T ss_pred CCcEEEEECCCcHHHHHHHHHHHcCcccCCCceEEEEEecCccccch-hcchhhhhccc-----------------cccc
Confidence 34579999999999999999888632 11 124555554432221 11111011110 0111
Q ss_pred eE-EEeccCCCCCCCCChhhhHHHHhcCccEEEEcCccCC-ccccHHHHHHHhHHHHHHHHHHHHhc
Q 010075 87 IT-FVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITK-FDERYDVAFGINTLGVIHLVNFAKKC 151 (519)
Q Consensus 87 v~-~v~gDl~~~~lgls~~~~~~~l~~~vdiViH~Aa~v~-f~~~~~~~~~~Nv~gt~~ll~~a~~~ 151 (519)
.. .+.++ .+ .+.+++.|+||-.||..+ ..+...+.+..|..-.+.+.+...+.
T Consensus 85 ~~~~~~~~----------~~--~~~~~~aDvVvi~ag~~rkpg~tR~Dll~~N~~I~k~~~~~i~~~ 139 (175)
T d7mdha1 85 LREVSIGI----------DP--YEVFEDVDWALLIGAKPRGPGMERAALLDINGQIFADQGKALNAV 139 (175)
T ss_dssp EEEEEEES----------CH--HHHTTTCSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ccCccccc----------cc--hhhccCCceEEEeeccCCCCCCcHHHHHHHHHHHHHHHHHHHHhh
Confidence 11 11111 11 255688999999998764 45778888999999999999999885
|
| >d1vi2a1 c.2.1.7 (A:107-288) Putative shikimate dehydrogenase YdiB {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Putative shikimate dehydrogenase YdiB species: Escherichia coli [TaxId: 562]
Probab=96.54 E-value=0.0067 Score=52.94 Aligned_cols=85 Identities=20% Similarity=0.298 Sum_probs=56.9
Q ss_pred cCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 010075 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (519)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (519)
.++++|+|.|+ |..|++++..|...+ +++|++..|........+.+. +++... .....
T Consensus 16 l~~k~vlIlGa-GGaarai~~al~~~g--~~~i~i~nR~~~~~~~~~~l~---------~~~~~~----------~~~~~ 73 (182)
T d1vi2a1 16 IKGKTMVLLGA-GGASTAIGAQGAIEG--LKEIKLFNRRDEFFDKALAFA---------QRVNEN----------TDCVV 73 (182)
T ss_dssp CTTCEEEEECC-SHHHHHHHHHHHHTT--CSEEEEEECSSTTHHHHHHHH---------HHHHHH----------SSCEE
T ss_pred cCCCEEEEECC-cHHHHHHHHHHhhcC--CceEeeeccchHHHHHHHHHH---------HHHHhh----------cCcce
Confidence 57899999995 889999999999976 479999999875543322222 222222 12334
Q ss_pred EeccCCCCCCCCChhhhHHHHhcCccEEEEcCcc
Q 010075 90 VPGDISSEDLGLKDSNLKEELWNELDIMVNSAAI 123 (519)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~~~vdiViH~Aa~ 123 (519)
...|+.+ ..+. .....+.|+|||+...
T Consensus 74 ~~~~~~~------~~~~-~~~~~~~diiIN~Tp~ 100 (182)
T d1vi2a1 74 TVTDLAD------QQAF-AEALASADILTNGTKV 100 (182)
T ss_dssp EEEETTC------HHHH-HHHHHTCSEEEECSST
T ss_pred Eeeeccc------ccch-hhhhcccceeccccCC
Confidence 4566663 3333 3556789999999765
|
| >d1o6za1 c.2.1.5 (A:22-162) Malate dehydrogenase {Archaeon Haloarcula marismortui [TaxId: 2238]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Archaeon Haloarcula marismortui [TaxId: 2238]
Probab=96.49 E-value=0.027 Score=46.93 Aligned_cols=112 Identities=12% Similarity=0.015 Sum_probs=72.1
Q ss_pred EEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHH-HHHHHHHhhhhhHHHHHhhhccccccccCCceEEEec
Q 010075 14 TILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAA-LRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVPG 92 (519)
Q Consensus 14 ~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~-~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v~g 92 (519)
+|.|.||+|.+|+.++-.|+..+ -+.++.++..+.+..... +.+ ++... .+ +..+..+..+
T Consensus 2 KV~IiGaaG~VG~~~A~~l~~~~-l~~el~L~Di~~~~~~~~g~a~--Dl~~~---------~~------~~~~~~i~~~ 63 (142)
T d1o6za1 2 KVSVVGAAGTVGAAAGYNIALRD-IADEVVFVDIPDKEDDTVGQAA--DTNHG---------IA------YDSNTRVRQG 63 (142)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTT-CCSEEEEECCGGGHHHHHHHHH--HHHHH---------HT------TTCCCEEEEC
T ss_pred eEEEECCCCcHHHHHHHHHHhCC-CCCEEEEEecCCcccccceeec--chhhc---------cc------ccCCceEeeC
Confidence 78999999999999999998864 446788777643221111 111 11110 00 1234444445
Q ss_pred cCCCCCCCCChhhhHHHHhcCccEEEEcCccCCc-cccHHHHHHHhHHHHHHHHHHHHhccCCceEE
Q 010075 93 DISSEDLGLKDSNLKEELWNELDIMVNSAAITKF-DERYDVAFGINTLGVIHLVNFAKKCVKLKVFV 158 (519)
Q Consensus 93 Dl~~~~lgls~~~~~~~l~~~vdiViH~Aa~v~f-~~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V 158 (519)
|.. + +.+.|+|+-+|+..+- .++..+.++.|..-.+.+.+..++. +.+.++
T Consensus 64 ~~~---------~-----~~~aDiVvitaG~~~~~g~~R~dl~~~N~~I~~~i~~~i~~~-~p~~i~ 115 (142)
T d1o6za1 64 GYE---------D-----TAGSDVVVITAGIPRQPGQTRIDLAGDNAPIMEDIQSSLDEH-NDDYIS 115 (142)
T ss_dssp CGG---------G-----GTTCSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHTT-CSCCEE
T ss_pred CHH---------H-----hhhcCEEEEecccccccCCchhhHHHHHHHHHHHHHHHHHhc-CCCceE
Confidence 432 1 3589999999996543 3567788999999999999988886 444443
|
| >d1y7ta1 c.2.1.5 (A:0-153) Malate dehydrogenase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Thermus thermophilus [TaxId: 274]
Probab=96.44 E-value=0.05 Score=45.76 Aligned_cols=111 Identities=8% Similarity=-0.011 Sum_probs=65.9
Q ss_pred CCEEEEeCCccHHHHHHHHHHHHhCCCcc----EEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCce
Q 010075 12 NKTILVSGVTGFVAKVFIEKILRVQPNVK----KLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKI 87 (519)
Q Consensus 12 ~k~VlITGaTGFlG~~Lv~~LL~~g~~v~----~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v 87 (519)
.++|.|+||+|++|++++-.|....- +. -..-+.-........+.+..++.. ......
T Consensus 4 p~KV~IiGA~G~VG~~~a~~l~~~~l-~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~-----------------~~~~~~ 65 (154)
T d1y7ta1 4 PVRVAVTGAAGQIGYSLLFRIAAGEM-LGKDQPVILQLLEIPQAMKALEGVVMELED-----------------CAFPLL 65 (154)
T ss_dssp CEEEEESSTTSHHHHHHHHHHHTTTT-TCTTCCEEEEEECCGGGHHHHHHHHHHHHT-----------------TTCTTE
T ss_pred CCEEEEECCCCHHHHHHHHHHHhccc-cccccchhHhHhccccchhhHcCchhhhhc-----------------cccccc
Confidence 45899999999999999999986431 11 111222222222111111111100 011223
Q ss_pred EEEeccCCCCCCCCChhhhHHHHhcCccEEEEcCccCCc-cccHHHHHHHhHHHHHHHHHHHHhc
Q 010075 88 TFVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF-DERYDVAFGINTLGVIHLVNFAKKC 151 (519)
Q Consensus 88 ~~v~gDl~~~~lgls~~~~~~~l~~~vdiViH~Aa~v~f-~~~~~~~~~~Nv~gt~~ll~~a~~~ 151 (519)
..+.+.-. + ...+.+.|+||-+||..+- .++..+.+..|+.-.+.+.+...+.
T Consensus 66 ~~~~~~~~---------~--~~~~~~advViitaG~~~~pg~~r~dl~~~N~~i~~~~~~~i~k~ 119 (154)
T d1y7ta1 66 AGLEATDD---------P--KVAFKDADYALLVGAAPRKAGMERRDLLQVNGKIFTEQGRALAEV 119 (154)
T ss_dssp EEEEEESC---------H--HHHTTTCSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cccccCCc---------h--hhhcccccEEEeecCcCCCCCCcHHHHHHHHHHHHHHHHHHHHHh
Confidence 33333211 1 2456789999999997653 4567788999999999999988875
|
| >d1lssa_ c.2.1.9 (A:) Ktn Mja218 {Archaeon Methanococcus jannaschii [TaxId: 2190]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Potassium channel NAD-binding domain domain: Ktn Mja218 species: Archaeon Methanococcus jannaschii [TaxId: 2190]
Probab=96.43 E-value=0.0098 Score=48.81 Aligned_cols=71 Identities=14% Similarity=0.233 Sum_probs=49.0
Q ss_pred CEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEEec
Q 010075 13 KTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVPG 92 (519)
Q Consensus 13 k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v~g 92 (519)
|+|+|.|+ |.+|+.+++.|.+.| ..|.++.+.+. ..+++. ++ -.+.++.|
T Consensus 1 M~IvI~G~-G~~G~~la~~L~~~g---~~v~vid~d~~---~~~~~~-------------~~----------~~~~vi~G 50 (132)
T d1lssa_ 1 MYIIIAGI-GRVGYTLAKSLSEKG---HDIVLIDIDKD---ICKKAS-------------AE----------IDALVING 50 (132)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTT---CEEEEEESCHH---HHHHHH-------------HH----------CSSEEEES
T ss_pred CEEEEECC-CHHHHHHHHHHHHCC---CCcceecCChh---hhhhhh-------------hh----------hhhhhccC
Confidence 68999997 999999999999988 56777766431 122222 11 24678999
Q ss_pred cCCCCCCCCChhhhHHHH-hcCccEEEEc
Q 010075 93 DISSEDLGLKDSNLKEEL-WNELDIMVNS 120 (519)
Q Consensus 93 Dl~~~~lgls~~~~~~~l-~~~vdiViH~ 120 (519)
|.++ .+..+.+ .++.|.++-+
T Consensus 51 d~~~-------~~~l~~~~i~~a~~vv~~ 72 (132)
T d1lssa_ 51 DCTK-------IKTLEDAGIEDADMYIAV 72 (132)
T ss_dssp CTTS-------HHHHHHTTTTTCSEEEEC
T ss_pred cccc-------hhhhhhcChhhhhhhccc
Confidence 9994 4444343 4678888865
|
| >d2hjsa1 c.2.1.3 (A:3-129,A:320-336) Usg-1 protein homolog PA3116 {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Usg-1 protein homolog PA3116 species: Pseudomonas aeruginosa [TaxId: 287]
Probab=96.27 E-value=0.0017 Score=54.85 Aligned_cols=37 Identities=22% Similarity=0.279 Sum_probs=28.2
Q ss_pred CCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEec
Q 010075 12 NKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRA 48 (519)
Q Consensus 12 ~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~ 48 (519)
.++|.|.||||++|..|++.|.++.+...++..+..+
T Consensus 2 ~mnVaIvGATGyvG~eli~lL~~~~hP~~~l~~~~s~ 38 (144)
T d2hjsa1 2 PLNVAVVGATGSVGEALVGLLDERDFPLHRLHLLASA 38 (144)
T ss_dssp CCCEEEETTTSHHHHHHHHHHHHTTCCCSCEEEEECT
T ss_pred CCEEEEECCCCHHHHHHHHHHHhcCCCceEEEEEeec
Confidence 4789999999999999999887654333467666543
|
| >d1u7za_ c.72.3.1 (A:) Coenzyme A biosynthesis bifunctional protein CoaBC, phosphopantothenoylcysteine synthase domain (CoaB) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribokinase-like superfamily: CoaB-like family: CoaB-like domain: Coenzyme A biosynthesis bifunctional protein CoaBC, phosphopantothenoylcysteine synthase domain (CoaB) species: Escherichia coli [TaxId: 562]
Probab=96.22 E-value=0.0046 Score=56.01 Aligned_cols=81 Identities=12% Similarity=0.118 Sum_probs=53.3
Q ss_pred hcCCCEEEEeCC----------------ccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHH
Q 010075 9 FLENKTILVSGV----------------TGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLK 72 (519)
Q Consensus 9 ~~~~k~VlITGa----------------TGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~ 72 (519)
-++|++||||+| ||-+|.+|++.+.+.| ..|.++..+....
T Consensus 3 dl~g~~vlITaG~T~E~ID~VR~ItN~SSGk~G~aiA~~~~~~G---a~V~li~g~~~~~-------------------- 59 (223)
T d1u7za_ 3 DLKHLNIMITAGPTREPLDPVRYISDHSSGKMGFAIAAAAARRG---ANVTLVSGPVSLP-------------------- 59 (223)
T ss_dssp TTTTCEEEEEESBCEEESSSSEEEEECCCSHHHHHHHHHHHHTT---CEEEEEECSCCCC--------------------
T ss_pred ccCCCEEEEECCCCcccCCCcceeccCCcHHHHHHHHHHHHHcC---CchhhhhcccccC--------------------
Confidence 368999999986 7999999999999999 5666666544321
Q ss_pred hhhccccccccCCceEEEeccCCCCCCCCChhhhHHHHhcCccEEEEcCccCCcc
Q 010075 73 EKWGTRLNSFISEKITFVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKFD 127 (519)
Q Consensus 73 ~~~~~~~~~~~~~~v~~v~gDl~~~~lgls~~~~~~~l~~~vdiViH~Aa~v~f~ 127 (519)
.+..+..+...=.+. -.+.....+.+.|++|++||...|.
T Consensus 60 ----------~p~~~~~~~~~t~~~-----m~~~~~~~~~~~D~~i~aAAvsDf~ 99 (223)
T d1u7za_ 60 ----------TPPFVKRVDVMTALE-----MEAAVNASVQQQNIFIGCAAVADYR 99 (223)
T ss_dssp ----------CCTTEEEEECCSHHH-----HHHHHHHHGGGCSEEEECCBCCSEE
T ss_pred ----------cccccccceehhhHH-----HHHHHHhhhccceeEeeeechhhhh
Confidence 123444444321110 1112224456899999999998774
|
| >d1e5qa1 c.2.1.3 (A:2-124,A:392-450) Saccharopine reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Saccharopine reductase species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]
Probab=96.10 E-value=0.0046 Score=53.08 Aligned_cols=36 Identities=22% Similarity=0.409 Sum_probs=31.4
Q ss_pred CCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCC
Q 010075 11 ENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAAD 50 (519)
Q Consensus 11 ~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~ 50 (519)
++|+|+|.|| |++|+.+++.|.+.| ++|++..|+..
T Consensus 1 ~~K~IliiGa-G~~G~~~a~~L~~~g---~~V~v~dr~~~ 36 (182)
T d1e5qa1 1 ATKSVLMLGS-GFVTRPTLDVLTDSG---IKVTVACRTLE 36 (182)
T ss_dssp CCCEEEEECC-STTHHHHHHHHHTTT---CEEEEEESCHH
T ss_pred CCCEEEEECC-CHHHHHHHHHHHhCC---CEEEEEECChH
Confidence 4689999986 999999999999988 57899999853
|
| >d1guza1 c.2.1.5 (A:1-142) Malate dehydrogenase {Chlorobium vibrioforme [TaxId: 1098]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Chlorobium vibrioforme [TaxId: 1098]
Probab=96.06 E-value=0.092 Score=43.38 Aligned_cols=114 Identities=15% Similarity=0.065 Sum_probs=71.5
Q ss_pred CEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEE-e
Q 010075 13 KTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFV-P 91 (519)
Q Consensus 13 k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v-~ 91 (519)
|+|.|+|| |.+|+.++..|+..+ -+.++.++.+.+....... + ++.....+ ...+..+. .
T Consensus 1 mKI~IIGa-G~VG~~la~~l~~~~-l~~el~L~Di~~~~~~~~~-~--d~~~~~~~--------------~~~~~~i~~~ 61 (142)
T d1guza1 1 MKITVIGA-GNVGATTAFRLAEKQ-LARELVLLDVVEGIPQGKA-L--DMYESGPV--------------GLFDTKVTGS 61 (142)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTT-CCSEEEEECSSSSHHHHHH-H--HHHTTHHH--------------HTCCCEEEEE
T ss_pred CEEEEECc-CHHHHHHHHHHHhCC-CCceEEEeccccccchhhh-h--hhhcccch--------------hcccceEEec
Confidence 57999996 999999999888865 3568888887764332221 1 11111100 01223332 2
Q ss_pred ccCCCCCCCCChhhhHHHHhcCccEEEEcCccCC-ccccHHHHHHHhHHHHHHHHHHHHhccCCceEEEE
Q 010075 92 GDISSEDLGLKDSNLKEELWNELDIMVNSAAITK-FDERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHV 160 (519)
Q Consensus 92 gDl~~~~lgls~~~~~~~l~~~vdiViH~Aa~v~-f~~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V~v 160 (519)
+|. +.+.+.|+|+-+||..+ ..+.-...+..|..-.+.+.+...+. ..+.++.+
T Consensus 62 ~~~--------------~~~~dadvvvitag~~~~~g~~r~~l~~~N~~i~~~i~~~i~~~-~p~aiviv 116 (142)
T d1guza1 62 NDY--------------ADTANSDIVIITAGLPRKPGMTREDLLMKNAGIVKEVTDNIMKH-SKNPIIIV 116 (142)
T ss_dssp SCG--------------GGGTTCSEEEECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHH-CSSCEEEE
T ss_pred CCH--------------HHhcCCeEEEEEEecCCCCCCchHHHHHHHHHHHHHHHHHhhcc-CCCeEEEE
Confidence 221 23468999999998753 34556677889999999999888775 44444443
|
| >d1mb4a1 c.2.1.3 (A:1-132,A:355-369) Aspartate beta-semialdehyde dehydrogenase {Vibrio cholerae [TaxId: 666]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Aspartate beta-semialdehyde dehydrogenase species: Vibrio cholerae [TaxId: 666]
Probab=96.03 E-value=0.0038 Score=52.65 Aligned_cols=37 Identities=14% Similarity=0.318 Sum_probs=28.3
Q ss_pred CEEEEeCCccHHHHHHHHHHHHhC-CCccEEEEEEecC
Q 010075 13 KTILVSGVTGFVAKVFIEKILRVQ-PNVKKLYLFVRAA 49 (519)
Q Consensus 13 k~VlITGaTGFlG~~Lv~~LL~~g-~~v~~V~~LvR~~ 49 (519)
|+|.|.||||++|+.|++.|+++. +.+..++.+..+.
T Consensus 1 mKVaIiGATGyvG~eLi~lLl~~~~~p~~~i~~~ss~~ 38 (147)
T d1mb4a1 1 MRVGLVGWRGMVGSVLMQRMVEERDFDLIEPVFFSTSQ 38 (147)
T ss_dssp CEEEEESCSSHHHHHHHHHHHHTTGGGGSEEEEEESSC
T ss_pred CEEEEECCccHHHHHHHHHHHhcCCCCceEEEEecccc
Confidence 579999999999999999998642 3345777665443
|
| >d1ldna1 c.2.1.5 (A:15-162) Lactate dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Bacillus stearothermophilus [TaxId: 1422]
Probab=95.97 E-value=0.02 Score=48.11 Aligned_cols=114 Identities=13% Similarity=0.136 Sum_probs=70.9
Q ss_pred CCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEE
Q 010075 11 ENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFV 90 (519)
Q Consensus 11 ~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v 90 (519)
.+++|.|.|| |.+|+.++..|+..+. +.+|.++.+.+..... +.+ ++.+. ..+....+...
T Consensus 5 ~~~KI~IiGa-G~vG~~~a~~l~~~~l-~~el~L~Di~~~~~~g-~a~--Dl~~~--------------~~~~~~~~~~~ 65 (148)
T d1ldna1 5 GGARVVVIGA-GFVGASYVFALMNQGI-ADEIVLIDANESKAIG-DAM--DFNHG--------------KVFAPKPVDIW 65 (148)
T ss_dssp TSCEEEEECC-SHHHHHHHHHHHHHTC-CSEEEEECSSHHHHHH-HHH--HHHHH--------------TTSSSSCCEEE
T ss_pred CCCeEEEECc-CHHHHHHHHHHHhcCC-CceEEEEeeccccccc-hhc--cHhhC--------------ccccCCCeEEE
Confidence 3678999997 9999999999998753 4688888765422111 100 11110 01112334444
Q ss_pred eccCCCCCCCCChhhhHHHHhcCccEEEEcCccCCc-cccHHHHHHHhHHHHHHHHHHHHhccCCceEE
Q 010075 91 PGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF-DERYDVAFGINTLGVIHLVNFAKKCVKLKVFV 158 (519)
Q Consensus 91 ~gDl~~~~lgls~~~~~~~l~~~vdiViH~Aa~v~f-~~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V 158 (519)
.+|.. .+.+.|+|+.+|+..+- .+...+.+..|+.-.+.+.+...+. ..+.++
T Consensus 66 ~~d~~--------------~l~daDvvvitag~~~~~~~~R~dl~~~N~~i~~~i~~~i~~~-~p~a~~ 119 (148)
T d1ldna1 66 HGDYD--------------DCRDADLVVICAGANQKPGETRLDLVDKNIAIFRSIVESVMAS-GFQGLF 119 (148)
T ss_dssp ECCGG--------------GTTTCSEEEECCSCCCCTTTCSGGGHHHHHHHHHHHHHHHHHH-TCCSEE
T ss_pred ECCHH--------------HhccceeEEEecccccccCcchhHHHHHHHHHHHHHHHHHHhh-CCCceE
Confidence 44422 24578999999987542 3444556788999999998887776 344443
|
| >d1v3va2 c.2.1.1 (A:113-294) Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase {Guinea pig (Cavia porcellus) [TaxId: 10141]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase species: Guinea pig (Cavia porcellus) [TaxId: 10141]
Probab=95.86 E-value=0.0073 Score=52.55 Aligned_cols=37 Identities=22% Similarity=0.079 Sum_probs=32.1
Q ss_pred cCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecC
Q 010075 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAA 49 (519)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~ 49 (519)
-+|.+|||+||+|.+|...+.-....| .+|++.+|++
T Consensus 28 ~~G~~VlV~ga~ggvG~~aiqlak~~G---a~vi~~~~~~ 64 (182)
T d1v3va2 28 KGGETVLVSAAAGAVGSVVGQIAKLKG---CKVVGAAGSD 64 (182)
T ss_dssp CSSCEEEESSTTSHHHHHHHHHHHHTT---CEEEEEESSH
T ss_pred CCCCEEEEEeCCCchhHHHHHHHHccC---CEEEEeCCCH
Confidence 368999999999999999998777777 6889999874
|
| >d1o8ca2 c.2.1.1 (A:116-192) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Hypothetical protein YhdH species: Escherichia coli [TaxId: 562]
Probab=95.73 E-value=0.005 Score=45.81 Aligned_cols=39 Identities=13% Similarity=0.231 Sum_probs=32.8
Q ss_pred CCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcc
Q 010075 11 ENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADID 52 (519)
Q Consensus 11 ~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~ 52 (519)
++.+|+|+||+|.+|...+..+...| .+|++..+++++.
T Consensus 31 ~~~~vlI~gasGgVG~~aiQlak~~G---~~Vi~~t~s~~k~ 69 (77)
T d1o8ca2 31 QDGEIVVTGASGGVGSTAVALLHKLG---YQVVAVSGRESTH 69 (77)
T ss_dssp GGCEEEESSTTSHHHHHHHHHHHHTT---CCEEEEESCGGGH
T ss_pred CCCcEEEEeCCCcHHHHHHHHHHHcC---CeEEEEECCHHHH
Confidence 57899999999999999999777777 5788988876554
|
| >d1xa0a2 c.2.1.1 (A:119-294) B. subtilis YhfP homologue {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: B. subtilis YhfP homologue species: Bacillus stearothermophilus [TaxId: 1422]
Probab=95.67 E-value=0.0058 Score=53.17 Aligned_cols=39 Identities=21% Similarity=0.204 Sum_probs=32.7
Q ss_pred CCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcc
Q 010075 11 ENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADID 52 (519)
Q Consensus 11 ~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~ 52 (519)
+|.+|||+||+|.+|...+.-....| .+|++.++++.+.
T Consensus 31 ~g~~VLI~gaaGGVG~~aiQlak~~G---a~Viat~~s~~k~ 69 (176)
T d1xa0a2 31 ERGPVLVTGATGGVGSLAVSMLAKRG---YTVEASTGKAAEH 69 (176)
T ss_dssp GGCCEEESSTTSHHHHHHHHHHHHTT---CCEEEEESCTTCH
T ss_pred CCCEEEEEeccchHHHHHHHHHHHcC---CceEEecCchHHH
Confidence 36789999999999999998777777 6788988887654
|
| >d1jaya_ c.2.1.6 (A:) Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Coenzyme F420H2:NADP+ oxidoreductase (FNO) species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Probab=95.56 E-value=0.0056 Score=52.99 Aligned_cols=34 Identities=15% Similarity=0.178 Sum_probs=30.4
Q ss_pred CEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecC
Q 010075 13 KTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAA 49 (519)
Q Consensus 13 k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~ 49 (519)
|+|.|+||+|.+|++|++.|++.| ++|.+..|.+
T Consensus 1 Mki~vigGaG~iG~alA~~la~~G---~~V~l~~R~~ 34 (212)
T d1jaya_ 1 MRVALLGGTGNLGKGLALRLATLG---HEIVVGSRRE 34 (212)
T ss_dssp CEEEEETTTSHHHHHHHHHHHTTT---CEEEEEESSH
T ss_pred CEEEEEeCCcHHHHHHHHHHHHCC---CEEEEEECCH
Confidence 679999999999999999999999 6778888864
|
| >d1iz0a2 c.2.1.1 (A:99-269) Quinone oxidoreductase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Quinone oxidoreductase species: Thermus thermophilus [TaxId: 274]
Probab=95.55 E-value=0.013 Score=50.34 Aligned_cols=39 Identities=8% Similarity=0.127 Sum_probs=32.4
Q ss_pred cCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCc
Q 010075 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADI 51 (519)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~ 51 (519)
-+|.+|+|+||+|-+|...+..+...| .+|++.++++..
T Consensus 26 ~~g~~VlI~ga~G~vG~~aiqlak~~G---~~vi~~~~~~~~ 64 (171)
T d1iz0a2 26 RPGEKVLVQAAAGALGTAAVQVARAMG---LRVLAAASRPEK 64 (171)
T ss_dssp CTTCEEEESSTTBHHHHHHHHHHHHTT---CEEEEEESSGGG
T ss_pred CCCCEEEEEeccccchhhhhhhhcccc---cccccccccccc
Confidence 468999999999999999988777767 578888887543
|
| >d1y6ja1 c.2.1.5 (A:7-148) Lactate dehydrogenase {Clostridium thermocellum [TaxId: 1515]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Clostridium thermocellum [TaxId: 1515]
Probab=95.51 E-value=0.09 Score=43.51 Aligned_cols=113 Identities=14% Similarity=0.095 Sum_probs=67.5
Q ss_pred CEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEEec
Q 010075 13 KTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVPG 92 (519)
Q Consensus 13 k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v~g 92 (519)
++|.|.|| |.+|..++-.|+..+ -+.+++++.+.+.....+. + ++... .. ...+.....+
T Consensus 2 ~KI~IIGa-G~VG~~~a~~l~~~~-l~~el~L~D~~~~~~~g~a-~--Dl~~~--------------~~-~~~~~~~~~~ 61 (142)
T d1y6ja1 2 SKVAIIGA-GFVGASAAFTMALRQ-TANELVLIDVFKEKAIGEA-M--DINHG--------------LP-FMGQMSLYAG 61 (142)
T ss_dssp CCEEEECC-SHHHHHHHHHHHHTT-CSSEEEEECCC---CCHHH-H--HHTTS--------------CC-CTTCEEEC--
T ss_pred CeEEEECC-CHHHHHHHHHHHhcC-CCCEEEEEeccCCccceee-e--eeccC--------------cc-cCCCeeEeeC
Confidence 46888897 999999999998865 4578898887764332211 0 11110 01 1123333333
Q ss_pred cCCCCCCCCChhhhHHHHhcCccEEEEcCccCC-ccccHHHHHHHhHHHHHHHHHHHHhccCCceEEEE
Q 010075 93 DISSEDLGLKDSNLKEELWNELDIMVNSAAITK-FDERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHV 160 (519)
Q Consensus 93 Dl~~~~lgls~~~~~~~l~~~vdiViH~Aa~v~-f~~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V~v 160 (519)
|. ..+.+.|+|+-+|+..+ ..+.....+..|+.-.+.+.+...+. ..+.++.+
T Consensus 62 ~~--------------~~~~~adivvitag~~~~~~~~r~~l~~~N~~i~~~i~~~i~~~-~p~ai~iv 115 (142)
T d1y6ja1 62 DY--------------SDVKDCDVIVVTAGANRKPGETRLDLAKKNVMIAKEVTQNIMKY-YNHGVILV 115 (142)
T ss_dssp CG--------------GGGTTCSEEEECCCC------CHHHHHHHHHHHHHHHHHHHHHH-CCSCEEEE
T ss_pred cH--------------HHhCCCceEEEecccccCcCcchhHHhhHHHHHHHHHHHHhhcc-CCCceEEE
Confidence 21 22467999999998754 34566777899999999999988876 44444433
|
| >d1a5za1 c.2.1.5 (A:22-163) Lactate dehydrogenase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Thermotoga maritima [TaxId: 2336]
Probab=95.49 E-value=0.1 Score=43.05 Aligned_cols=114 Identities=14% Similarity=0.126 Sum_probs=71.7
Q ss_pred CEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEEec
Q 010075 13 KTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVPG 92 (519)
Q Consensus 13 k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v~g 92 (519)
|+|.|.|| |.+|..++..|+..+ -+.++.++.+.+..... +.+ ++.... + ...+.....+
T Consensus 1 mKI~IIGa-G~VG~~~a~~l~~~~-l~~el~L~Di~~~~~~g-~~~--Dl~~~~---------~------~~~~~~~~~~ 60 (140)
T d1a5za1 1 MKIGIVGL-GRVGSSTAFALLMKG-FAREMVLIDVDKKRAEG-DAL--DLIHGT---------P------FTRRANIYAG 60 (140)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHHT-CCSEEEEECSSHHHHHH-HHH--HHHHHG---------G------GSCCCEEEEC
T ss_pred CEEEEECc-CHHHHHHHHHHHhCC-CCCEEEEEecccccccc-hhc--cccccc---------c------ccccccccCC
Confidence 57899996 999999999888775 34688888765421111 111 111110 0 1133444444
Q ss_pred cCCCCCCCCChhhhHHHHhcCccEEEEcCccCCc-cccHHHHHHHhHHHHHHHHHHHHhccCCceEEEEe
Q 010075 93 DISSEDLGLKDSNLKEELWNELDIMVNSAAITKF-DERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVS 161 (519)
Q Consensus 93 Dl~~~~lgls~~~~~~~l~~~vdiViH~Aa~v~f-~~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V~vS 161 (519)
|.. .+.+.|+|+-+|+..+- .+...+.+..|..-.+.+.+...+. ..+.++.+-
T Consensus 61 ~~~--------------~~~~adivvitag~~~~~g~~r~dl~~~N~~I~~~i~~~i~~~-~p~aivivv 115 (140)
T d1a5za1 61 DYA--------------DLKGSDVVIVAAGVPQKPGETRLQLLGRNARVMKEIARNVSKY-APDSIVIVV 115 (140)
T ss_dssp CGG--------------GGTTCSEEEECCCCCCCSSCCHHHHHHHHHHHHHHHHHHHHHH-CTTCEEEEC
T ss_pred cHH--------------HhcCCCEEEEecccccCCCcchhhhhccccchHHHHHHHHHhc-CCCcEEEEe
Confidence 322 24678999999998653 4556677888999999998888876 445555543
|
| >d1pzga1 c.2.1.5 (A:14-163) Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5811]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Toxoplasma gondii [TaxId: 5811]
Probab=95.45 E-value=0.085 Score=44.32 Aligned_cols=119 Identities=13% Similarity=0.120 Sum_probs=70.7
Q ss_pred CCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEE
Q 010075 11 ENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFV 90 (519)
Q Consensus 11 ~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v 90 (519)
+.++|.|.|| |.+|+.++..|...+ +.+++++...+........ ++.....+ ........
T Consensus 6 k~~KI~IIGa-G~VG~~lA~~l~~~~--~~el~L~D~~~~~~~g~a~---Dl~~~~~~--------------~~~~~~~~ 65 (154)
T d1pzga1 6 RRKKVAMIGS-GMIGGTMGYLCALRE--LADVVLYDVVKGMPEGKAL---DLSHVTSV--------------VDTNVSVR 65 (154)
T ss_dssp CCCEEEEECC-SHHHHHHHHHHHHHT--CCEEEEECSSSSHHHHHHH---HHHHHHHH--------------TTCCCCEE
T ss_pred CCCcEEEECC-CHHHHHHHHHHHhCC--CceEEEEEeccccchhHHH---HHhhhccc--------------cCCeeEEe
Confidence 4578999997 999999998777765 4578877665532222111 11110000 00111111
Q ss_pred eccCCCCCCCCChhhhHHHHhcCccEEEEcCccCCcc------ccHHHHHHHhHHHHHHHHHHHHhccCCceEEEEec
Q 010075 91 PGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKFD------ERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVST 162 (519)
Q Consensus 91 ~gDl~~~~lgls~~~~~~~l~~~vdiViH~Aa~v~f~------~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V~vST 162 (519)
.. .+ .+....+.|+|+-+|+..+-. ......+..|+.-.+.+++.+.+. +.+.++.+-|
T Consensus 66 ~~-----------~~-~~~~~~~adiVvitag~~~~~g~~~~~~tR~~l~~~n~~iv~~i~~~i~~~-~p~aiviivs 130 (154)
T d1pzga1 66 AE-----------YS-YEAALTGADCVIVTAGLTKVPGKPDSEWSRNDLLPFNSKIIREIGQNIKKY-CPKTFIIVVT 130 (154)
T ss_dssp EE-----------CS-HHHHHTTCSEEEECCSCSSCTTCCGGGCCGGGGHHHHHHHHHHHHHHHHHH-CTTCEEEECC
T ss_pred cc-----------Cc-hhhhhcCCCeEEEecccccCCCCCCcccchhhhhhhhHHHHHHHHHHHHhc-CCCcEEEEeC
Confidence 11 11 124457899999999875431 134455888999999999988886 5555655544
|
| >d1llda1 c.2.1.5 (A:7-149) Lactate dehydrogenase {Bifidobacterium longum, strain am101-2 [TaxId: 216816]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Bifidobacterium longum, strain am101-2 [TaxId: 216816]
Probab=95.37 E-value=0.14 Score=42.31 Aligned_cols=114 Identities=14% Similarity=0.078 Sum_probs=70.3
Q ss_pred CEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEEec
Q 010075 13 KTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVPG 92 (519)
Q Consensus 13 k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v~g 92 (519)
.+|.|.|+ |.+|+.++-.|+..+ -+.++.++.+.+..... +.+ ++.... .+ ........+
T Consensus 2 ~Ki~IIGa-G~VG~~~a~~l~~~~-l~~ElvL~D~~~~~~~g-~a~--Dl~~a~--------------~~-~~~~~i~~~ 61 (143)
T d1llda1 2 TKLAVIGA-GAVGSTLAFAAAQRG-IAREIVLEDIAKERVEA-EVL--DMQHGS--------------SF-YPTVSIDGS 61 (143)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTT-CCSEEEEECSSHHHHHH-HHH--HHHHTG--------------GG-STTCEEEEE
T ss_pred CEEEEECC-CHHHHHHHHHHHhcC-CCcEEEEEEeccccchh-HHH--HHHhcc--------------cc-CCCceeecC
Confidence 46889996 999999999998765 34678887765422111 111 111110 01 122223222
Q ss_pred cCCCCCCCCChhhhHHHHhcCccEEEEcCccCCc-cccHHHHHHHhHHHHHHHHHHHHhccCCceEEEE
Q 010075 93 DISSEDLGLKDSNLKEELWNELDIMVNSAAITKF-DERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHV 160 (519)
Q Consensus 93 Dl~~~~lgls~~~~~~~l~~~vdiViH~Aa~v~f-~~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V~v 160 (519)
+-. +.+.+.|+|+-+|+..+- .+...+.+..|..-.+.+....++. +.+.++-+
T Consensus 62 ~~~-------------~~~~daDvVVitaG~~~~~g~~R~dl~~~N~~i~~~i~~~i~~~-~p~ai~iv 116 (143)
T d1llda1 62 DDP-------------EICRDADMVVITAGPRQKPGQSRLELVGATVNILKAIMPNLVKV-APNAIYML 116 (143)
T ss_dssp SCG-------------GGGTTCSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHH-CTTSEEEE
T ss_pred CCH-------------HHhhCCcEEEEecccccCCCCchhhhhhhhHHHHHHHHHHHHhh-CCCeEEEE
Confidence 211 224578999999998653 4666778999999999998888776 44444433
|
| >d5mdha1 c.2.1.5 (A:1-154) Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Pig (Sus scrofa) [TaxId: 9823]
Probab=95.36 E-value=0.043 Score=46.21 Aligned_cols=111 Identities=14% Similarity=0.043 Sum_probs=63.4
Q ss_pred CCEEEEeCCccHHHHHHHHHHHHhCC----CccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCce
Q 010075 12 NKTILVSGVTGFVAKVFIEKILRVQP----NVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKI 87 (519)
Q Consensus 12 ~k~VlITGaTGFlG~~Lv~~LL~~g~----~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v 87 (519)
.++|.|+||+|.+|++++-.|+...- ....++++...+ .....+-+.-++... .....
T Consensus 3 p~KV~IiGA~G~VG~~la~~l~~~~~~~~~~~~~L~l~d~~~-~~~~~~~l~~~~~~~-----------------~~~~~ 64 (154)
T d5mdha1 3 PIRVLVTGAAGQIAYSLLYSIGNGSVFGKDQPIILVLLDITP-MMGVLDGVLMELQDC-----------------ALPLL 64 (154)
T ss_dssp CEEEEESSTTSHHHHTTHHHHHTTTTTCTTCCEEEEEECCGG-GHHHHHHHHHHHHHT-----------------CCTTE
T ss_pred ceEEEEECCCCHHHHHHHHHHHHHHhcCCCCccEEEEecCcc-chhhhhhhhhhhccc-----------------ccccc
Confidence 46899999999999999998875321 122344333332 222222221111000 01122
Q ss_pred EEEeccCCCCCCCCChhhhHHHHhcCccEEEEcCccCCc-cccHHHHHHHhHHHHHHHHHHHHhc
Q 010075 88 TFVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF-DERYDVAFGINTLGVIHLVNFAKKC 151 (519)
Q Consensus 88 ~~v~gDl~~~~lgls~~~~~~~l~~~vdiViH~Aa~v~f-~~~~~~~~~~Nv~gt~~ll~~a~~~ 151 (519)
..+.+ . ..+ .+.+++.|+||-+|+..+- .++....++.|..-.+.+.+...+.
T Consensus 65 ~~~~~--~-------~~~--~~~~~~~dvVVitag~~~~~g~sr~dll~~N~~i~k~~~~~i~k~ 118 (154)
T d5mdha1 65 KDVIA--T-------DKE--EIAFKDLDVAILVGSMPRRDGMERKDLLKANVKIFKCQGAALDKY 118 (154)
T ss_dssp EEEEE--E-------SCH--HHHTTTCSEEEECCSCCCCTTCCTTTTHHHHHHHHHHHHHHHHHH
T ss_pred ccccc--C-------ccc--ccccCCceEEEEecccCCCCCCchhHHHHHhHHHHHHHHHHHHhh
Confidence 22221 1 111 2456789999999987543 3455566889999999998887664
|
| >d1tt7a2 c.2.1.1 (A:128-294) Hypothetical protein YhfP {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Hypothetical protein YhfP species: Bacillus subtilis [TaxId: 1423]
Probab=95.14 E-value=0.0065 Score=52.37 Aligned_cols=40 Identities=15% Similarity=0.184 Sum_probs=33.2
Q ss_pred CCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccH
Q 010075 12 NKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSA 54 (519)
Q Consensus 12 ~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~ 54 (519)
+.+|||+||+|.+|...+......| .+|++.+|+..+...
T Consensus 24 ~~~VLV~gaaGgVG~~avQlAk~~G---a~Viat~~s~~k~~~ 63 (167)
T d1tt7a2 24 KGSVLVTGATGGVGGIAVSMLNKRG---YDVVASTGNREAADY 63 (167)
T ss_dssp GCCEEEESTTSHHHHHHHHHHHHHT---CCEEEEESSSSTHHH
T ss_pred CCEEEEeCCcchHHHHHHHHHHHcC---CceEEEecCHHHHHH
Confidence 5689999999999999998777777 678999998765433
|
| >d1yb5a2 c.2.1.1 (A:121-294) Quinone oxidoreductase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Quinone oxidoreductase species: Human (Homo sapiens) [TaxId: 9606]
Probab=95.07 E-value=0.022 Score=48.93 Aligned_cols=37 Identities=16% Similarity=0.095 Sum_probs=31.1
Q ss_pred cCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecC
Q 010075 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAA 49 (519)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~ 49 (519)
-+|.+|||+||+|.+|...+......| .+|+++++++
T Consensus 27 ~~g~~VlV~Ga~G~vG~~aiq~a~~~G---~~vi~~~~~~ 63 (174)
T d1yb5a2 27 KAGESVLVHGASGGVGLAACQIARAYG---LKILGTAGTE 63 (174)
T ss_dssp CTTCEEEEETCSSHHHHHHHHHHHHTT---CEEEEEESSH
T ss_pred CCCCEEEEEeccccccccccccccccC---cccccccccc
Confidence 368899999999999999988777767 5788888763
|
| >d1pqwa_ c.2.1.1 (A:) Putative enoyl reductase domain of polyketide synthase {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Putative enoyl reductase domain of polyketide synthase species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=95.02 E-value=0.016 Score=50.07 Aligned_cols=36 Identities=14% Similarity=0.220 Sum_probs=31.0
Q ss_pred CCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecC
Q 010075 11 ENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAA 49 (519)
Q Consensus 11 ~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~ 49 (519)
+|.+|||+||+|.+|...+..+...| .+|++.+++.
T Consensus 25 ~g~~VlI~ga~g~vG~~~iqla~~~g---~~vi~~~~~~ 60 (183)
T d1pqwa_ 25 PGERVLIHSATGGVGMAAVSIAKMIG---ARIYTTAGSD 60 (183)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHHT---CEEEEEESSH
T ss_pred CCCEEEEECCCCCcccccchhhcccc---ccceeeeccc
Confidence 57899999999999999999888777 5788888764
|
| >d1qora2 c.2.1.1 (A:113-291) Quinone oxidoreductase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Quinone oxidoreductase species: Escherichia coli [TaxId: 562]
Probab=94.92 E-value=0.031 Score=48.01 Aligned_cols=37 Identities=19% Similarity=0.121 Sum_probs=32.2
Q ss_pred CCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCC
Q 010075 11 ENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAAD 50 (519)
Q Consensus 11 ~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~ 50 (519)
.|.+|+|+||+|.+|..++.-....| .+|++.+++..
T Consensus 28 ~g~~Vlv~ga~g~vG~~~iqlak~~G---a~Vi~~~~s~~ 64 (179)
T d1qora2 28 PDEQFLFHAAAGGVGLIACQWAKALG---AKLIGTVGTAQ 64 (179)
T ss_dssp TTCEEEESSTTBHHHHHHHHHHHHHT---CEEEEEESSHH
T ss_pred CCCEEEEEccccccchHHHHHHHHhC---CeEeecccchH
Confidence 57899999999999999999888877 68899988753
|
| >d1gpja2 c.2.1.7 (A:144-302) Glutamyl tRNA-reductase middle domain {Archaeon Methanopyrus kandleri [TaxId: 2320]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Glutamyl tRNA-reductase middle domain species: Archaeon Methanopyrus kandleri [TaxId: 2320]
Probab=94.88 E-value=0.028 Score=47.72 Aligned_cols=38 Identities=24% Similarity=0.337 Sum_probs=32.7
Q ss_pred hcCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecC
Q 010075 9 FLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAA 49 (519)
Q Consensus 9 ~~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~ 49 (519)
-+++++|+|.|+ |-+|+.+++.|...|. .+|++..|+.
T Consensus 21 ~l~~~~ilviGa-G~~g~~v~~~L~~~g~--~~i~v~nRt~ 58 (159)
T d1gpja2 21 SLHDKTVLVVGA-GEMGKTVAKSLVDRGV--RAVLVANRTY 58 (159)
T ss_dssp CCTTCEEEEESC-CHHHHHHHHHHHHHCC--SEEEEECSSH
T ss_pred CcccCeEEEECC-CHHHHHHHHHHHhcCC--cEEEEEcCcH
Confidence 368899999997 9999999999999764 6788888874
|
| >d1hyha1 c.2.1.5 (A:21-166) L-2-hydroxyisocapronate dehydrogenase, L-HICDH {Lactobacillus confusus [TaxId: 1583]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: L-2-hydroxyisocapronate dehydrogenase, L-HICDH species: Lactobacillus confusus [TaxId: 1583]
Probab=94.75 E-value=0.095 Score=43.61 Aligned_cols=115 Identities=10% Similarity=0.065 Sum_probs=67.6
Q ss_pred CEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEEec
Q 010075 13 KTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVPG 92 (519)
Q Consensus 13 k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v~g 92 (519)
|+|.|.|+ |.+|..++-.|+..+ -+.++.++.+.+..... +.+ ++.+.. ...........+
T Consensus 2 kKI~IIGa-G~VG~~~a~~l~~~~-~~~elvL~Di~~~~~~g-~~~--Dl~~a~--------------~~~~~~~~~~~~ 62 (146)
T d1hyha1 2 RKIGIIGL-GNVGAAVAHGLIAQG-VADDYVFIDANEAKVKA-DQI--DFQDAM--------------ANLEAHGNIVIN 62 (146)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHHT-CCSEEEEECSSHHHHHH-HHH--HHHHHG--------------GGSSSCCEEEES
T ss_pred CeEEEECc-CHHHHHHHHHHHhcC-CCceEEEEecccchhhh-HHH--hhhccc--------------cccCCccceecc
Confidence 68999995 999999999998875 34677777665321111 111 111110 011123344444
Q ss_pred cCCCCCCCCChhhhHHHHhcCccEEEEcCccCCcc-----ccHHHHHHHhHHHHHHHHHHHHhccCCceEEEEe
Q 010075 93 DISSEDLGLKDSNLKEELWNELDIMVNSAAITKFD-----ERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVS 161 (519)
Q Consensus 93 Dl~~~~lgls~~~~~~~l~~~vdiViH~Aa~v~f~-----~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V~vS 161 (519)
|.. .+.+.|+||-+||..+.. ..-...+..|+.-.+.+.+..++. +.+.++.+-
T Consensus 63 d~~--------------~l~~adiVVitaG~~~~~~~~~g~~R~~l~~~N~~i~~~i~~~i~~~-~p~aivivv 121 (146)
T d1hyha1 63 DWA--------------ALADADVVISTLGNIKLQQDNPTGDRFAELKFTSSMVQSVGTNLKES-GFHGVLVVI 121 (146)
T ss_dssp CGG--------------GGTTCSEEEECCSCGGGTC-------CTTHHHHHHHHHHHHHHHHHT-TCCSEEEEC
T ss_pred CHH--------------HhccccEEEEeccccccccccCCccHHHHHHHHHHHHHHHHHHHhhc-CCCeEEEEe
Confidence 432 236799999999975421 122334778999889888888775 445554433
|
| >d1i0za1 c.2.1.5 (A:1-160) Lactate dehydrogenase {Human (Homo sapiens), heart isoform (H chain) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Human (Homo sapiens), heart isoform (H chain) [TaxId: 9606]
Probab=94.71 E-value=0.12 Score=43.71 Aligned_cols=117 Identities=18% Similarity=0.118 Sum_probs=72.7
Q ss_pred hhcCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCce
Q 010075 8 EFLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKI 87 (519)
Q Consensus 8 ~~~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v 87 (519)
.....++|.|.|+ |.+|..++-.|+..+ -+.++.++.+.+.....+ -+ ++..... +.....
T Consensus 16 ~~~~~~KV~IIGa-G~VG~~~A~~l~~~~-l~~ElvLiD~~~~~a~g~-al--Dl~h~~~--------------~~~~~~ 76 (160)
T d1i0za1 16 ATVPNNKITVVGV-GQVGMACAISILGKS-LADELALVDVLEDKLKGE-MM--DLQHGSL--------------FLQTPK 76 (160)
T ss_dssp CCCCSSEEEEECC-SHHHHHHHHHHHHTT-CCSEEEEECSCHHHHHHH-HH--HHHHTGG--------------GCCCSE
T ss_pred ccCCCCeEEEECC-CHHHHHHHHHHHhcC-CCcEEEEEEeccchhHHH-HH--HHhcccc--------------ccCCCe
Confidence 3456689999996 999999999998875 446788877653222111 10 1211111 111222
Q ss_pred EEEeccCCCCCCCCChhhhHHHHhcCccEEEEcCccCCc-cccHHHHHHHhHHHHHHHHHHHHhccCCceEE
Q 010075 88 TFVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF-DERYDVAFGINTLGVIHLVNFAKKCVKLKVFV 158 (519)
Q Consensus 88 ~~v~gDl~~~~lgls~~~~~~~l~~~vdiViH~Aa~v~f-~~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V 158 (519)
..-.+|.. .+.+.|+|+.+|+..+- .++....+..|+.-.+.+....++. +.+.++
T Consensus 77 ~~~~~d~~--------------~~~~adiVVitAg~~~~~g~tR~~l~~~N~~i~~~i~~~i~~~-~p~aii 133 (160)
T d1i0za1 77 IVADKDYS--------------VTANSKIVVVTAGVRQQEGESRLNLVQRNVNVFKFIIPQIVKY-SPDCII 133 (160)
T ss_dssp EEECSSGG--------------GGTTCSEEEECCSCCCCTTCCGGGGHHHHHHHHHHHHHHHHHH-CTTCEE
T ss_pred EEeccchh--------------hcccccEEEEecCCccccCcchHHHHHHHHHHHHHHHHHHHhc-CCCcEE
Confidence 23333322 24678999999998643 3455566888999999999888876 444443
|
| >d1ojua1 c.2.1.5 (A:22-163) Malate dehydrogenase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Probab=94.52 E-value=0.32 Score=39.94 Aligned_cols=116 Identities=16% Similarity=0.036 Sum_probs=70.5
Q ss_pred CEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEEe-
Q 010075 13 KTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVP- 91 (519)
Q Consensus 13 k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v~- 91 (519)
|+|.|.|+ |.+|..++-.|+..+ -+.++.++.+.+..... +.+ ++.+. . ...........
T Consensus 1 MKI~IIGa-G~VG~~~a~~l~~~~-~~~elvL~Di~~~~~~g-~al--Dl~~~---------~-----~~~~~~~~i~~~ 61 (142)
T d1ojua1 1 MKLGFVGA-GRVGSTSAFTCLLNL-DVDEIALVDIAEDLAVG-EAM--DLAHA---------A-----AGIDKYPKIVGG 61 (142)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHHS-CCSEEEEECSSHHHHHH-HHH--HHHHH---------H-----HTTTCCCEEEEE
T ss_pred CEEEEECc-CHHHHHHHHHHHhcC-cCceEEEEecccchhhH-HHH--HHhhh---------c-----cccCCCCccccC
Confidence 57899996 999999999888765 55788888765322111 110 11100 0 00111222222
Q ss_pred ccCCCCCCCCChhhhHHHHhcCccEEEEcCccCC-ccccHHHHHHHhHHHHHHHHHHHHhccCCceEEEEec
Q 010075 92 GDISSEDLGLKDSNLKEELWNELDIMVNSAAITK-FDERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVST 162 (519)
Q Consensus 92 gDl~~~~lgls~~~~~~~l~~~vdiViH~Aa~v~-f~~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V~vST 162 (519)
+|. +.+.+.|+|+-.|+..+ -.......+..|..-.+.+.+..++. +.+.++.+-|
T Consensus 62 ~d~--------------~~~~~adiVvitag~~~~~g~~r~~l~~~n~~i~~~i~~~i~~~-~p~aivivvt 118 (142)
T d1ojua1 62 ADY--------------SLLKGSEIIVVTAGLARKPGMTRLDLAHKNAGIIKDIAKKIVEN-APESKILVVT 118 (142)
T ss_dssp SCG--------------GGGTTCSEEEECCCCCCCSSCCHHHHHHHHHHHHHHHHHHHHTT-STTCEEEECS
T ss_pred CCH--------------HHhccccEEEEeccccCCCCCchHHHHHHhhHHHHHHHHHHHhh-CCCcEEEEec
Confidence 232 23467899999998654 34566777888999999999988876 4445544433
|
| >d1uxja1 c.2.1.5 (A:2-143) Malate dehydrogenase {Chloroflexus aurantiacus [TaxId: 1108]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Chloroflexus aurantiacus [TaxId: 1108]
Probab=94.52 E-value=0.26 Score=40.50 Aligned_cols=113 Identities=10% Similarity=0.105 Sum_probs=65.0
Q ss_pred CEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEE-e
Q 010075 13 KTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFV-P 91 (519)
Q Consensus 13 k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v-~ 91 (519)
++|.|.|+ |.+|..++-.|+..+ +..+.++...+..... +.+ ++.....+. .....+. .
T Consensus 2 ~KI~IIGa-G~VG~~~A~~l~~~~--l~dl~l~D~~~~~~~~-~~~--Dl~~~~~~~--------------~~~~~i~~~ 61 (142)
T d1uxja1 2 KKISIIGA-GFVGSTTAHWLAAKE--LGDIVLLDIVEGVPQG-KAL--DLYEASPIE--------------GFDVRVTGT 61 (142)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHHT--CSEEEEECSSSSHHHH-HHH--HHHTTHHHH--------------TCCCCEEEE
T ss_pred CeEEEECC-CHHHHHHHHHHHhCC--cceEEEEeeccccchh-HHH--Hhhcccccc--------------CCCCEEEec
Confidence 58889996 999999999888764 4577777765532221 111 221111110 1122222 2
Q ss_pred ccCCCCCCCCChhhhHHHHhcCccEEEEcCccCC-ccccHHHHHHHhHHHHHHHHHHHHhccCCceEEEE
Q 010075 92 GDISSEDLGLKDSNLKEELWNELDIMVNSAAITK-FDERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHV 160 (519)
Q Consensus 92 gDl~~~~lgls~~~~~~~l~~~vdiViH~Aa~v~-f~~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V~v 160 (519)
+|.. .+.+.|+||-+|+..+ ........+..|+.-.+.+.+...+. +.+.++.+
T Consensus 62 ~d~~--------------~~~~advvvitag~~~~~~~~r~dl~~~N~~i~~~i~~~i~k~-~p~aiviv 116 (142)
T d1uxja1 62 NNYA--------------DTANSDVIVVTSGAPRKPGMSREDLIKVNADITRACISQAAPL-SPNAVIIM 116 (142)
T ss_dssp SCGG--------------GGTTCSEEEECCSCC---------CHHHHHHHHHHHHHHHGGG-CTTCEEEE
T ss_pred CcHH--------------HhcCCCEEEEeeeccCCcCcchhHHHhHHHHHHHHHHHHHhcc-CCCceEEE
Confidence 2322 2367899999999754 34455566888999999999888875 44555544
|
| >d1vkna1 c.2.1.3 (A:1-144,A:308-339) N-acetyl-gamma-glutamyl-phosphate reductase ArgC {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: N-acetyl-gamma-glutamyl-phosphate reductase ArgC species: Thermotoga maritima [TaxId: 2336]
Probab=94.47 E-value=0.021 Score=49.39 Aligned_cols=41 Identities=20% Similarity=0.253 Sum_probs=30.9
Q ss_pred CEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccH
Q 010075 13 KTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSA 54 (519)
Q Consensus 13 k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~ 54 (519)
++|.|.||||++|..|++.|.+ .|++.-+++..|+..++..
T Consensus 2 ikVaIvGATGyvG~eLirlL~~-HP~~ei~~l~s~~~aG~~i 42 (176)
T d1vkna1 2 IRAGIIGATGYTGLELVRLLKN-HPEAKITYLSSRTYAGKKL 42 (176)
T ss_dssp EEEEEESTTSHHHHHHHHHHHH-CTTEEEEEEECSTTTTSBH
T ss_pred eEEEEECCCcHHHHHHHHHHHh-CCCceEEEeeccccCCCcc
Confidence 5799999999999999997765 6887555555555555433
|
| >d1t2da1 c.2.1.5 (A:1-150) Lactate dehydrogenase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]
Probab=94.28 E-value=0.3 Score=40.57 Aligned_cols=115 Identities=17% Similarity=0.214 Sum_probs=68.6
Q ss_pred CCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEEe
Q 010075 12 NKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVP 91 (519)
Q Consensus 12 ~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v~ 91 (519)
..+|-|.|+ |.+|+.++..|+..+ +.++.++.+.......+ .+ ++.....|. ..+.....
T Consensus 3 ~~KI~IIGa-G~VG~~~a~~l~~~~--l~el~L~Di~~~~~~g~-a~--Dl~~~~~~~--------------~~~~~v~~ 62 (150)
T d1t2da1 3 KAKIVLVGS-GMIGGVMATLIVQKN--LGDVVLFDIVKNMPHGK-AL--DTSHTNVMA--------------YSNCKVSG 62 (150)
T ss_dssp CCEEEEECC-SHHHHHHHHHHHHTT--CCEEEEECSSSSHHHHH-HH--HHHTHHHHH--------------TCCCCEEE
T ss_pred CCeEEEECC-CHHHHHHHHHHHhCC--CCeEEEEeccCCcceee-ec--chhhhcccc--------------CCCcEEEe
Confidence 358999995 999999997666643 57888887755332211 11 222111110 12222222
Q ss_pred ccCCCCCCCCChhhhHHHHhcCccEEEEcCccCCcc------ccHHHHHHHhHHHHHHHHHHHHhccCCceEEEE
Q 010075 92 GDISSEDLGLKDSNLKEELWNELDIMVNSAAITKFD------ERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHV 160 (519)
Q Consensus 92 gDl~~~~lgls~~~~~~~l~~~vdiViH~Aa~v~f~------~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V~v 160 (519)
.+-. +.+.+.|+|+-+|+..+.. ......+..|..-.+.+.+..++. ..+.++.+
T Consensus 63 ~~~~-------------~~~~~advvvitag~~~~~g~~~~~~~R~~l~~~N~~iv~~i~~~i~~~-~p~aiviv 123 (150)
T d1t2da1 63 SNTY-------------DDLAGADVVIVTAGFTKAPGKSDKEWNRDDLLPLNNKIMIEIGGHIKKN-CPNAFIIV 123 (150)
T ss_dssp ECCG-------------GGGTTCSEEEECCSCSSCTTCCSTTCCGGGGHHHHHHHHHHHHHHHHHH-CTTSEEEE
T ss_pred cccc-------------cccCCCcEEEEecccccCCCCCccccchhHHHHHHHHHHHHHHHHHHhc-CCCeEEEE
Confidence 2211 2346799999999975431 124455888999999999888876 44555544
|
| >d2g17a1 c.2.1.3 (A:1-153,A:309-334) N-acetyl-gamma-glutamyl-phosphate reductase ArgC {Salmonella typhimurium [TaxId: 90371]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: N-acetyl-gamma-glutamyl-phosphate reductase ArgC species: Salmonella typhimurium [TaxId: 90371]
Probab=94.11 E-value=0.027 Score=48.80 Aligned_cols=36 Identities=22% Similarity=0.403 Sum_probs=28.0
Q ss_pred CEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecC
Q 010075 13 KTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAA 49 (519)
Q Consensus 13 k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~ 49 (519)
++|.|.|||||+|..|++.|.. .|++.-.++..++.
T Consensus 2 ikVaIiGATGyvG~eLlrlL~~-HP~~ei~~l~~~s~ 37 (179)
T d2g17a1 2 LNTLIVGASGYAGAELVSYVNR-HPHMTITALTVSAQ 37 (179)
T ss_dssp EEEEEETTTSHHHHHHHHHHHH-CTTEEEEEEEEETT
T ss_pred cEEEEECcccHHHHHHHHHHHh-CCCCceEeeEeecc
Confidence 5899999999999999997776 58874445555543
|
| >d2cvoa1 c.2.1.3 (A:68-218,A:384-415) Putative semialdehyde dehydrogenase {Rice (Oryza sativa) [TaxId: 4530]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Putative semialdehyde dehydrogenase species: Rice (Oryza sativa) [TaxId: 4530]
Probab=93.92 E-value=0.028 Score=48.94 Aligned_cols=41 Identities=12% Similarity=0.246 Sum_probs=30.4
Q ss_pred CCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCccc
Q 010075 12 NKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDS 53 (519)
Q Consensus 12 ~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~ 53 (519)
..+|.|.||||++|..|++.|.+ .|.+.-+++..++..++.
T Consensus 5 kikVaIlGATGyvG~elirLL~~-HP~~ei~~l~S~~~aG~~ 45 (183)
T d2cvoa1 5 EVRIAVLGASGYTGAEIVRLLAN-HPQFRIKVMTADRKAGEQ 45 (183)
T ss_dssp CEEEEEESCSSHHHHHHHHHHTT-CSSEEEEEEECSTTTTSC
T ss_pred ccEEEEECcccHHHHHHHHHHHh-CCCceEEEEeccccCCCc
Confidence 45799999999999999998887 588754444445555543
|
| >d2jfga1 c.5.1.1 (A:1-93) UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: MurCD N-terminal domain superfamily: MurCD N-terminal domain family: MurCD N-terminal domain domain: UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD species: Escherichia coli [TaxId: 562]
Probab=93.88 E-value=0.078 Score=40.32 Aligned_cols=36 Identities=11% Similarity=0.212 Sum_probs=29.3
Q ss_pred cCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecC
Q 010075 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAA 49 (519)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~ 49 (519)
|+||+|+|.|. |-.|..+++.|.+.|. +|++.....
T Consensus 3 ~~~K~v~ViGl-G~sG~s~a~~L~~~g~---~v~~~D~~~ 38 (93)
T d2jfga1 3 YQGKNVVIIGL-GLTGLSCVDFFLARGV---TPRVMDTRM 38 (93)
T ss_dssp CTTCCEEEECC-SHHHHHHHHHHHHTTC---CCEEEESSS
T ss_pred cCCCEEEEEeE-CHHHHHHHHHHHHCCC---EEEEeeCCc
Confidence 78999999996 7789999999999984 556666543
|
| >d2gz1a1 c.2.1.3 (A:2-127,A:330-357) Aspartate beta-semialdehyde dehydrogenase {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Aspartate beta-semialdehyde dehydrogenase species: Streptococcus pneumoniae [TaxId: 1313]
Probab=93.51 E-value=0.02 Score=48.34 Aligned_cols=34 Identities=24% Similarity=0.312 Sum_probs=25.2
Q ss_pred CEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEE
Q 010075 13 KTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFV 46 (519)
Q Consensus 13 k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~Lv 46 (519)
=+|.|.||||++|..|++.|.++...+.++..+.
T Consensus 2 ~kVaIvGATGyvG~eLirlL~~H~fp~~~l~~~~ 35 (154)
T d2gz1a1 2 YTVAVVGATGAVGAQMIKMLEESTLPIDKIRYLA 35 (154)
T ss_dssp EEEEEETTTSHHHHHHHHHHHTCCSCEEEEEEEE
T ss_pred CEEEEECCCcHHHHHHHHHHHcCCCCceEEEEec
Confidence 3799999999999999987765431345666654
|
| >d1ks9a2 c.2.1.6 (A:1-167) Ketopantoate reductase PanE {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Ketopantoate reductase PanE species: Escherichia coli [TaxId: 562]
Probab=93.22 E-value=0.048 Score=45.86 Aligned_cols=35 Identities=14% Similarity=0.315 Sum_probs=30.9
Q ss_pred CEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCc
Q 010075 13 KTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADI 51 (519)
Q Consensus 13 k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~ 51 (519)
|+|+|.|+ |-+|..++..|.+.| ++|.++.|....
T Consensus 1 MkI~IiGa-G~iG~~~a~~L~~~G---~~V~~~~r~~~~ 35 (167)
T d1ks9a2 1 MKITVLGC-GALGQLWLTALCKQG---HEVQGWLRVPQP 35 (167)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTT---CEEEEECSSCCS
T ss_pred CEEEEECc-CHHHHHHHHHHHHCC---CceEEEEcCHHH
Confidence 68999997 999999999999999 677899998653
|
| >d1vj0a2 c.2.1.1 (A:156-337) Hypothetical protein TM0436 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Hypothetical protein TM0436 species: Thermotoga maritima [TaxId: 2336]
Probab=93.05 E-value=0.083 Score=45.39 Aligned_cols=37 Identities=11% Similarity=0.221 Sum_probs=29.8
Q ss_pred cCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecC
Q 010075 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAA 49 (519)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~ 49 (519)
-+|.+|+|+|| |-+|...+..+...|. .+|++..++.
T Consensus 27 ~~G~~VlV~Ga-G~iG~~~~~~ak~~Ga--~~Vi~~~~~~ 63 (182)
T d1vj0a2 27 FAGKTVVIQGA-GPLGLFGVVIARSLGA--ENVIVIAGSP 63 (182)
T ss_dssp CBTCEEEEECC-SHHHHHHHHHHHHTTB--SEEEEEESCH
T ss_pred CCCCEEEEECC-Cccchhheeccccccc--cccccccccc
Confidence 46899999996 8899988887777663 5888888764
|
| >d1jvba2 c.2.1.1 (A:144-313) Alcohol dehydrogenase {Archaeon Sulfolobus solfataricus [TaxId: 2287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Archaeon Sulfolobus solfataricus [TaxId: 2287]
Probab=92.83 E-value=0.15 Score=42.96 Aligned_cols=37 Identities=19% Similarity=0.153 Sum_probs=30.0
Q ss_pred CCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecC
Q 010075 11 ENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAA 49 (519)
Q Consensus 11 ~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~ 49 (519)
.|.+|+|.|++|-+|...+..+...+. .+|++..++.
T Consensus 27 ~g~~vlV~G~~G~vG~~~~~~~~~~g~--~~V~~~~~~~ 63 (170)
T d1jvba2 27 PTKTLLVVGAGGGLGTMAVQIAKAVSG--ATIIGVDVRE 63 (170)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHHTC--CEEEEEESSH
T ss_pred CCCEEEEEeccccceeeeeeccccccc--ccccccccch
Confidence 578999999999999988887777664 5788777663
|
| >d1r0ka2 c.2.1.3 (A:3-126,A:265-290) 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Zymomonas mobilis [TaxId: 542]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: 1-deoxy-D-xylulose-5-phosphate reductoisomerase species: Zymomonas mobilis [TaxId: 542]
Probab=92.81 E-value=0.29 Score=40.66 Aligned_cols=40 Identities=18% Similarity=0.292 Sum_probs=32.6
Q ss_pred CCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcc
Q 010075 12 NKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADID 52 (519)
Q Consensus 12 ~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~ 52 (519)
.|+|.|.|+||-||+..++-+-+ .|+-.+|++|+-.++-.
T Consensus 2 pK~I~IlGsTGSIG~~tL~Vi~~-~~d~f~v~~lsa~~N~~ 41 (150)
T d1r0ka2 2 PRTVTVLGATGSIGHSTLDLIER-NLDRYQVIALTANRNVK 41 (150)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHH-TGGGEEEEEEEESSCHH
T ss_pred CcEEEEECCCcHHHHHHHHHHHc-CCCCcEEEEEEeCCCHH
Confidence 48999999999999999887765 56667999998776543
|
| >d2hmva1 c.2.1.9 (A:7-140) Ktn bsu222 {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Potassium channel NAD-binding domain domain: Ktn bsu222 species: Bacillus subtilis [TaxId: 1423]
Probab=92.77 E-value=0.17 Score=40.89 Aligned_cols=71 Identities=14% Similarity=0.158 Sum_probs=45.3
Q ss_pred CEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEEec
Q 010075 13 KTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVPG 92 (519)
Q Consensus 13 k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v~g 92 (519)
|++.|.|+ |-+|+.+++.|.+.|.+ |+++...+ ++++ .++ ......+.|
T Consensus 1 k~~iIiG~-G~~G~~la~~L~~~g~~---vvvid~d~------~~~~----------~~~-----------~~~~~~~~g 49 (134)
T d2hmva1 1 KQFAVIGL-GRFGGSIVKELHRMGHE---VLAVDINE------EKVN----------AYA-----------SYATHAVIA 49 (134)
T ss_dssp CCEEEECC-SHHHHHHHHHHHHTTCC---CEEEESCH------HHHH----------HTT-----------TTCSEEEEC
T ss_pred CEEEEECC-CHHHHHHHHHHHHCCCe---EEEecCcH------HHHH----------HHH-----------HhCCcceee
Confidence 56788875 99999999999999954 45555432 1221 011 134567889
Q ss_pred cCCCCCCCCChhhhHHHH-hcCccEEEEcC
Q 010075 93 DISSEDLGLKDSNLKEEL-WNELDIMVNSA 121 (519)
Q Consensus 93 Dl~~~~lgls~~~~~~~l-~~~vdiViH~A 121 (519)
|.+++ +.++.+ +++.|.||=+.
T Consensus 50 d~~~~-------~~l~~a~i~~a~~vi~~~ 72 (134)
T d2hmva1 50 NATEE-------NELLSLGIRNFEYVIVAI 72 (134)
T ss_dssp CTTCT-------THHHHHTGGGCSEEEECC
T ss_pred ecccc-------hhhhccCCccccEEEEEc
Confidence 99953 333333 56788877554
|
| >d1piwa2 c.2.1.1 (A:153-320) Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Cinnamyl alcohol dehydrogenase, ADH6 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=92.62 E-value=0.23 Score=41.90 Aligned_cols=39 Identities=13% Similarity=0.117 Sum_probs=30.6
Q ss_pred cCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcc
Q 010075 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADID 52 (519)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~ 52 (519)
-.|.+|+|.|+ |.+|...+..+...| .+|+++.++....
T Consensus 26 ~~g~~vlI~Ga-G~vG~~a~q~ak~~G---~~vi~~~~~~~k~ 64 (168)
T d1piwa2 26 GPGKKVGIVGL-GGIGSMGTLISKAMG---AETYVISRSSRKR 64 (168)
T ss_dssp STTCEEEEECC-SHHHHHHHHHHHHHT---CEEEEEESSSTTH
T ss_pred CCCCEEEEECC-CCcchhHHHHhhhcc---ccccccccchhHH
Confidence 46899999986 999998887666666 5788888876543
|
| >d2ldxa1 c.2.1.5 (A:1-159) Lactate dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Mouse (Mus musculus) [TaxId: 10090]
Probab=92.46 E-value=0.11 Score=43.83 Aligned_cols=115 Identities=16% Similarity=0.052 Sum_probs=67.4
Q ss_pred cCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 010075 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (519)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (519)
++..+|.|.|+ |.+|..++..|+..+ -+.++.++.+.+..... +.+ ++.... .+.......
T Consensus 17 ~~~~KI~IIGa-G~VG~~~A~~l~~~~-l~~elvL~D~~~~~a~g-~al--Dl~~~~--------------~~~~~~~~~ 77 (159)
T d2ldxa1 17 LSRCKITVVGV-GDVGMACAISILLKG-LADELALVDADTDKLRG-EAL--DLQHGS--------------LFLSTPKIV 77 (159)
T ss_dssp CCCCEEEEECC-SHHHHHHHHHHHTTT-SCSEEEEECSCHHHHHH-HHH--HHHHTT--------------TTCSCCEEE
T ss_pred CCCCeEEEECC-CHHHHHHHHHHHhcC-CCCEEEEEeCCchhhhc-cHH--HHhCcc--------------hhcCCCeEE
Confidence 45568999996 999999999888865 34678887765322111 111 121110 011122222
Q ss_pred EeccCCCCCCCCChhhhHHHHhcCccEEEEcCccCCc-cccHHHHHHHhHHHHHHHHHHHHhccCCceEE
Q 010075 90 VPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF-DERYDVAFGINTLGVIHLVNFAKKCVKLKVFV 158 (519)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~~~vdiViH~Aa~v~f-~~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V 158 (519)
..+|. ..+.+.|+||-+|+..+- .+.....++.|+.-.+.+....++. +.+.++
T Consensus 78 ~~~d~--------------~~~~~adivvitag~~~~~~~~R~dll~~N~~i~~~i~~~i~~~-~p~~iv 132 (159)
T d2ldxa1 78 FGKDY--------------NVSANSKLVIITAGARMVSGQTRLDLLQRNVAIMKAIVPGVIQN-SPDCKI 132 (159)
T ss_dssp EESSG--------------GGGTTEEEEEECCSCCCCTTTCSSCTTHHHHHHHHHHTTTHHHH-STTCEE
T ss_pred eccch--------------hhhccccEEEEecccccCCCCCHHHHHHHHHHHHHHHHHHHhcc-CCCeEE
Confidence 23332 223678999999987543 2333445778888888887777665 334443
|
| >d1e3ja2 c.2.1.1 (A:143-312) Ketose reductase (sorbitol dehydrogenase) {Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Ketose reductase (sorbitol dehydrogenase) species: Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]
Probab=91.60 E-value=0.27 Score=41.33 Aligned_cols=36 Identities=19% Similarity=0.124 Sum_probs=28.6
Q ss_pred cCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecC
Q 010075 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAA 49 (519)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~ 49 (519)
-.|.+|+|+| +|-+|...+..+...| .+|++..++.
T Consensus 25 ~~g~~vlV~G-~G~vG~~~~~~ak~~G---a~vi~v~~~~ 60 (170)
T d1e3ja2 25 QLGTTVLVIG-AGPIGLVSVLAAKAYG---AFVVCTARSP 60 (170)
T ss_dssp CTTCEEEEEC-CSHHHHHHHHHHHHTT---CEEEEEESCH
T ss_pred CCCCEEEEEc-ccccchhhHhhHhhhc---ccccccchHH
Confidence 4678999998 6899999887776666 5888888764
|
| >d1pjqa1 c.2.1.11 (A:1-113) Siroheme synthase CysG, domain 1 {Salmonella typhimurium [TaxId: 90371]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Siroheme synthase N-terminal domain-like domain: Siroheme synthase CysG, domain 1 species: Salmonella typhimurium [TaxId: 90371]
Probab=91.45 E-value=0.39 Score=37.54 Aligned_cols=35 Identities=23% Similarity=0.278 Sum_probs=29.4
Q ss_pred cCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEec
Q 010075 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRA 48 (519)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~ 48 (519)
++||+|+|.| +|-+|..-++.|++.| .+|++....
T Consensus 10 l~~k~vlVvG-~G~va~~ka~~ll~~g---a~v~v~~~~ 44 (113)
T d1pjqa1 10 LRDRDCLIVG-GGDVAERKARLLLEAG---ARLTVNALT 44 (113)
T ss_dssp CBTCEEEEEC-CSHHHHHHHHHHHHTT---BEEEEEESS
T ss_pred eCCCEEEEEC-CCHHHHHHHHHHHHCC---CeEEEEecc
Confidence 6899999998 6889999999999998 566665543
|
| >d1o89a2 c.2.1.1 (A:116-292) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Hypothetical protein YhdH species: Escherichia coli [TaxId: 562]
Probab=91.30 E-value=0.083 Score=45.48 Aligned_cols=38 Identities=13% Similarity=0.222 Sum_probs=31.9
Q ss_pred CCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcc
Q 010075 12 NKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADID 52 (519)
Q Consensus 12 ~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~ 52 (519)
+.+|||+||+|.+|...+...-..| .+|++.+|+....
T Consensus 32 ~~~vlV~gasGGVG~~aiQlAk~~G---a~Via~~~~~~k~ 69 (177)
T d1o89a2 32 DGEIVVTGASGGVGSTAVALLHKLG---YQVVAVSGRESTH 69 (177)
T ss_dssp GCEEEESSTTSHHHHHHHHHHHHTT---CCEEEEESCGGGH
T ss_pred CCcEEEEEccccchHHHHHHHHHcC---CCeEEEecchhHH
Confidence 3589999999999999998887777 6788999986554
|
| >d1nyta1 c.2.1.7 (A:102-271) Shikimate 5-dehydrogenase AroE {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Shikimate 5-dehydrogenase AroE species: Escherichia coli [TaxId: 562]
Probab=91.24 E-value=0.12 Score=43.95 Aligned_cols=37 Identities=16% Similarity=0.199 Sum_probs=31.4
Q ss_pred cCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCC
Q 010075 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAAD 50 (519)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~ 50 (519)
.+||+|+|.|| |..+++++..|.+.+ .+|+++.|+..
T Consensus 16 ~~~k~vlIlGa-GGaarai~~al~~~g---~~i~I~nRt~~ 52 (170)
T d1nyta1 16 RPGLRILLIGA-GGASRGVLLPLLSLD---CAVTITNRTVS 52 (170)
T ss_dssp CTTCEEEEECC-SHHHHHHHHHHHHTT---CEEEEECSSHH
T ss_pred CCCCEEEEECC-cHHHHHHHHHhcccc---eEEEeccchHH
Confidence 57899999995 779999999999977 36999999753
|
| >d1jw9b_ c.111.1.1 (B:) Molybdenum cofactor biosynthesis protein MoeB {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Activating enzymes of the ubiquitin-like proteins superfamily: Activating enzymes of the ubiquitin-like proteins family: Molybdenum cofactor biosynthesis protein MoeB domain: Molybdenum cofactor biosynthesis protein MoeB species: Escherichia coli [TaxId: 562]
Probab=91.17 E-value=0.68 Score=41.38 Aligned_cols=39 Identities=21% Similarity=0.220 Sum_probs=32.0
Q ss_pred hhcCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecC
Q 010075 8 EFLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAA 49 (519)
Q Consensus 8 ~~~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~ 49 (519)
+-+++++|+|.| .|.+|.+++..|.+.| |++++++....
T Consensus 26 ~kL~~~~VliiG-~GglGs~va~~La~~G--vg~i~lvD~D~ 64 (247)
T d1jw9b_ 26 EALKDSRVLIVG-LGGLGCAASQYLASAG--VGNLTLLDFDT 64 (247)
T ss_dssp HHHHHCEEEEEC-CSHHHHHHHHHHHHHT--CSEEEEECCCB
T ss_pred HHHhCCCEEEEC-CCHHHHHHHHHHHHcC--CCeEEEECCcc
Confidence 446779999999 5779999999999987 58888875433
|
| >d1uufa2 c.2.1.1 (A:145-312) Hypothetical protein YahK {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Hypothetical protein YahK species: Escherichia coli [TaxId: 562]
Probab=91.16 E-value=0.28 Score=41.25 Aligned_cols=37 Identities=16% Similarity=0.164 Sum_probs=27.8
Q ss_pred cCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCC
Q 010075 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAAD 50 (519)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~ 50 (519)
-.|.+|+|.|+ |.+|...+..+...| .++++..++..
T Consensus 29 ~~G~~VlI~Ga-G~vG~~a~qlak~~G---a~~i~~~~~~~ 65 (168)
T d1uufa2 29 GPGKKVGVVGI-GGLGHMGIKLAHAMG---AHVVAFTTSEA 65 (168)
T ss_dssp CTTCEEEEECC-SHHHHHHHHHHHHTT---CEEEEEESSGG
T ss_pred CCCCEEEEecc-chHHHHHHHHhhccc---ccchhhccchh
Confidence 46899999986 889998887666666 45667776554
|
| >d1gu7a2 c.2.1.1 (A:161-349) 2,4-dienoyl-CoA reductase {Yeast (Candida tropicalis) [TaxId: 5482]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: 2,4-dienoyl-CoA reductase species: Yeast (Candida tropicalis) [TaxId: 5482]
Probab=91.09 E-value=0.17 Score=43.69 Aligned_cols=40 Identities=15% Similarity=-0.021 Sum_probs=31.4
Q ss_pred cCCCEEEE-eCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcc
Q 010075 10 LENKTILV-SGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADID 52 (519)
Q Consensus 10 ~~~k~VlI-TGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~ 52 (519)
-.|.+|+| +||+|.+|...+.-....| .+|++.+|++.+.
T Consensus 27 ~~g~~vli~~ga~g~vG~~aiqlAk~~G---a~vI~~v~~~~~~ 67 (189)
T d1gu7a2 27 TPGKDWFIQNGGTSAVGKYASQIGKLLN---FNSISVIRDRPNL 67 (189)
T ss_dssp CTTTCEEEESCTTSHHHHHHHHHHHHHT---CEEEEEECCCTTH
T ss_pred CCCCEEEEEeCCCchHHHHHHHHHhhcC---CeEEEEEeccccc
Confidence 35667777 7999999999988777777 6889999876553
|
| >d1p77a1 c.2.1.7 (A:102-272) Shikimate 5-dehydrogenase AroE {Haemophilus influenzae [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Shikimate 5-dehydrogenase AroE species: Haemophilus influenzae [TaxId: 727]
Probab=91.03 E-value=0.097 Score=44.72 Aligned_cols=36 Identities=25% Similarity=0.341 Sum_probs=30.6
Q ss_pred cCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecC
Q 010075 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAA 49 (519)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~ 49 (519)
.++|+|+|.| +|..|++++..|.+.+ .+|+++.|+.
T Consensus 16 ~~~k~vlIlG-aGGaarai~~aL~~~~---~~i~I~nR~~ 51 (171)
T d1p77a1 16 RPNQHVLILG-AGGATKGVLLPLLQAQ---QNIVLANRTF 51 (171)
T ss_dssp CTTCEEEEEC-CSHHHHTTHHHHHHTT---CEEEEEESSH
T ss_pred CCCCEEEEEC-CcHHHHHHHHHHcccC---ceeeeccchH
Confidence 5789999998 5778999999998744 6899999985
|
| >d1id1a_ c.2.1.9 (A:) Rck domain from putative potassium channel Kch {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Potassium channel NAD-binding domain domain: Rck domain from putative potassium channel Kch species: Escherichia coli [TaxId: 562]
Probab=90.85 E-value=0.4 Score=39.50 Aligned_cols=75 Identities=13% Similarity=0.236 Sum_probs=48.5
Q ss_pred EEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEEecc
Q 010075 14 TILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVPGD 93 (519)
Q Consensus 14 ~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v~gD 93 (519)
+|+|.|. |=+|+.+++.|.+.+ ..|+++...+.. ..+++.+ . ...++.++.||
T Consensus 5 HiII~G~-g~~g~~l~~~L~~~~---~~v~vId~d~~~--~~~~~~~-------------~--------~~~~~~vi~Gd 57 (153)
T d1id1a_ 5 HFIVCGH-SILAINTILQLNQRG---QNVTVISNLPED--DIKQLEQ-------------R--------LGDNADVIPGD 57 (153)
T ss_dssp CEEEECC-SHHHHHHHHHHHHTT---CCEEEEECCCHH--HHHHHHH-------------H--------HCTTCEEEESC
T ss_pred EEEEECC-CHHHHHHHHHHHHcC---CCEEEEeccchh--HHHHHHH-------------h--------hcCCcEEEEcc
Confidence 5889986 899999999999988 455666654321 1111110 0 13578999999
Q ss_pred CCCCCCCCChhhhHHHHhcCccEEEEcC
Q 010075 94 ISSEDLGLKDSNLKEELWNELDIMVNSA 121 (519)
Q Consensus 94 l~~~~lgls~~~~~~~l~~~vdiViH~A 121 (519)
.++ ...+.+.-+++.+.||=+.
T Consensus 58 ~~d------~~~L~~a~i~~a~~vi~~~ 79 (153)
T d1id1a_ 58 SND------SSVLKKAGIDRCRAILALS 79 (153)
T ss_dssp TTS------HHHHHHHTTTTCSEEEECS
T ss_pred Ccc------hHHHHHhccccCCEEEEcc
Confidence 995 2333333456788888654
|
| >d1vj1a2 c.2.1.1 (A:125-311) Putative zinc-binding alcohol dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Putative zinc-binding alcohol dehydrogenase species: Mouse (Mus musculus) [TaxId: 10090]
Probab=90.70 E-value=0.24 Score=42.59 Aligned_cols=34 Identities=15% Similarity=0.095 Sum_probs=25.5
Q ss_pred CEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEec
Q 010075 13 KTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRA 48 (519)
Q Consensus 13 k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~ 48 (519)
.+|||+||+|-+|...++-....|. ..|+..+++
T Consensus 32 etVLI~gaaGgVG~~aiQlak~~Ga--~~vi~~~~~ 65 (187)
T d1vj1a2 32 QTMVVSGAAGACGSLAGQIGHLLGC--SRVVGICGT 65 (187)
T ss_dssp CEEEESSTTSTTGGGHHHHHHHTTC--SEEEEEESS
T ss_pred CEEEEECCCchhhHHHHHHHHHcCC--cceecccch
Confidence 7899999999999998887665563 345554443
|
| >d1f8fa2 c.2.1.1 (A:163-336) Benzyl alcohol dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Benzyl alcohol dehydrogenase species: Acinetobacter calcoaceticus [TaxId: 471]
Probab=89.75 E-value=0.6 Score=39.35 Aligned_cols=36 Identities=8% Similarity=-0.032 Sum_probs=27.2
Q ss_pred cCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEec
Q 010075 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRA 48 (519)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~ 48 (519)
-.|.+|+|.|+ |.+|...+..+...|. .+|++..++
T Consensus 27 ~~g~~VlI~G~-G~iG~~~~~~ak~~g~--~~v~~~~~~ 62 (174)
T d1f8fa2 27 TPASSFVTWGA-GAVGLSALLAAKVCGA--SIIIAVDIV 62 (174)
T ss_dssp CTTCEEEEESC-SHHHHHHHHHHHHHTC--SEEEEEESC
T ss_pred CCCCEEEEeCC-CHHHhhhhhccccccc--ceeeeeccH
Confidence 36789999997 9999998887777774 456665544
|
| >d1jqba2 c.2.1.1 (A:1140-1313) Bacterial secondary alcohol dehydrogenase {Clostridium beijerinckii [TaxId: 1520]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Bacterial secondary alcohol dehydrogenase species: Clostridium beijerinckii [TaxId: 1520]
Probab=89.75 E-value=0.25 Score=41.97 Aligned_cols=37 Identities=14% Similarity=0.062 Sum_probs=28.2
Q ss_pred cCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecC
Q 010075 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAA 49 (519)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~ 49 (519)
-.|.+|+|.|+ |.+|...+..+...|+ .+|++..++.
T Consensus 26 ~~g~~VlI~Ga-G~vGl~~~q~ak~~Ga--~~Vi~~d~~~ 62 (174)
T d1jqba2 26 EMGSSVVVIGI-GAVGLMGIAGAKLRGA--GRIIGVGSRP 62 (174)
T ss_dssp CTTCCEEEECC-SHHHHHHHHHHHTTTC--SCEEEECCCH
T ss_pred CCCCEEEEEcC-Ccchhhhhhhhhcccc--cccccccchh
Confidence 46889999986 9999888777766664 5688877653
|
| >d2jhfa2 c.2.1.1 (A:164-339) Alcohol dehydrogenase {Horse (Equus caballus) [TaxId: 9796]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Horse (Equus caballus) [TaxId: 9796]
Probab=88.46 E-value=0.59 Score=39.33 Aligned_cols=39 Identities=15% Similarity=-0.043 Sum_probs=29.6
Q ss_pred CCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcc
Q 010075 11 ENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADID 52 (519)
Q Consensus 11 ~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~ 52 (519)
.|.+|+|.|+. .+|...+..+...+. .+|++..++....
T Consensus 28 ~GdtVlV~GaG-G~G~~~~~~~~~~g~--~~Vi~~~~~~~k~ 66 (176)
T d2jhfa2 28 QGSTCAVFGLG-GVGLSVIMGCKAAGA--ARIIGVDINKDKF 66 (176)
T ss_dssp TTCEEEEECCS-HHHHHHHHHHHHTTC--SEEEEECSCGGGH
T ss_pred CCCEEEEECCC-CcHHHHHHHHHHcCC--ceEEeecCcHHHH
Confidence 57899999994 588888877777664 6888888876543
|
| >d2pv7a2 c.2.1.6 (A:92-243) Prephenate dehydrogenase TyrA {Haemophilus influenzae [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Prephenate dehydrogenase TyrA species: Haemophilus influenzae [TaxId: 727]
Probab=88.40 E-value=0.17 Score=41.80 Aligned_cols=37 Identities=14% Similarity=0.124 Sum_probs=30.8
Q ss_pred CCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCc
Q 010075 12 NKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADI 51 (519)
Q Consensus 12 ~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~ 51 (519)
-++|.|.||.|.+|..+++.|.+.|+ .|++..|....
T Consensus 9 ~~kI~iIGg~G~mG~~la~~L~~~G~---~V~~~d~~~~~ 45 (152)
T d2pv7a2 9 IHKIVIVGGYGKLGGLFARYLRASGY---PISILDREDWA 45 (152)
T ss_dssp CCCEEEETTTSHHHHHHHHHHHTTTC---CEEEECTTCGG
T ss_pred CCeEEEEcCCCHHHHHHHHHHHHcCC---CcEeccccccc
Confidence 36899999999999999999999995 55777776543
|
| >d1fcda1 c.3.1.5 (A:1-114,A:256-327) Flavocytochrome c sulfide dehydrogenase, FCSD, flavin-binding subunit {Purple phototrophic bacterium (Chromatium vinosum) [TaxId: 1049]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Flavocytochrome c sulfide dehydrogenase, FCSD, flavin-binding subunit species: Purple phototrophic bacterium (Chromatium vinosum) [TaxId: 1049]
Probab=87.44 E-value=0.37 Score=40.04 Aligned_cols=37 Identities=16% Similarity=0.264 Sum_probs=32.3
Q ss_pred CCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecC
Q 010075 11 ENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAA 49 (519)
Q Consensus 11 ~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~ 49 (519)
+||+|+|.| .|+.|-.++..|.+.++++ +|+++-+..
T Consensus 1 ~gkrivIvG-gG~~G~e~A~~l~~~~~~~-~Vtlie~~~ 37 (186)
T d1fcda1 1 AGRKVVVVG-GGTGGATAAKYIKLADPSI-EVTLIEPNT 37 (186)
T ss_dssp CCCEEEEEC-CSHHHHHHHHHHHHHCTTS-EEEEECSCS
T ss_pred CCCcEEEEC-ccHHHHHHHHHHHHcCCCC-cEEEEECCC
Confidence 589999998 6999999999999999875 788887655
|
| >d1pl8a2 c.2.1.1 (A:146-316) Ketose reductase (sorbitol dehydrogenase) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Ketose reductase (sorbitol dehydrogenase) species: Human (Homo sapiens) [TaxId: 9606]
Probab=87.32 E-value=0.8 Score=38.30 Aligned_cols=37 Identities=16% Similarity=0.146 Sum_probs=29.0
Q ss_pred cCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecC
Q 010075 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAA 49 (519)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~ 49 (519)
-.|.+|+|.|+ |-+|...+..+...|. .+|++..+.+
T Consensus 25 ~~gd~VlI~G~-G~iG~~~~~~a~~~G~--~~Vi~~d~~~ 61 (171)
T d1pl8a2 25 TLGHKVLVCGA-GPIGMVTLLVAKAMGA--AQVVVTDLSA 61 (171)
T ss_dssp CTTCEEEEECC-SHHHHHHHHHHHHTTC--SEEEEEESCH
T ss_pred CCCCEEEEECC-CccHHHHHHHHHHcCC--ceEEeccCCH
Confidence 35789999986 9999988887777664 5788877664
|
| >d1yovb1 c.111.1.2 (B:12-437) UBA3 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Activating enzymes of the ubiquitin-like proteins superfamily: Activating enzymes of the ubiquitin-like proteins family: Ubiquitin activating enzymes (UBA) domain: UBA3 species: Human (Homo sapiens) [TaxId: 9606]
Probab=87.11 E-value=1.1 Score=43.65 Aligned_cols=97 Identities=12% Similarity=0.131 Sum_probs=57.4
Q ss_pred hhhcCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHH---H-HHHhh---hhhHHHHHhhhcccc
Q 010075 7 VEFLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRF---Q-NEVLA---KDVFNVLKEKWGTRL 79 (519)
Q Consensus 7 ~~~~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl---~-~~~~~---~~~f~~l~~~~~~~~ 79 (519)
+.-+++.+|||.|+ |.+|..+++.|...| |++|.++....-..+-..|- . +.+-+ ...-+++++..|
T Consensus 32 ~~~l~~~kVlvvG~-GglG~ei~k~L~~~G--vg~i~lvD~D~Ve~sNL~RQflf~~~diG~~Ka~~a~~~l~~~np--- 105 (426)
T d1yovb1 32 QFLLDTCKVLVIGA-GGLGCELLKNLALSG--FRQIHVIDMDTIDVSNLNRQFLFRPKDIGRPKAEVAAEFLNDRVP--- 105 (426)
T ss_dssp HHHHHHCCEEEECS-STTHHHHHHHHHTTT--CCCEEEECCCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHST---
T ss_pred HHHHhcCeEEEECC-CHHHHHHHHHHHHcC--CCeEEEEECCCcchhhhcccccCChhHcCcHHHHHHHHHHHhhCC---
Confidence 34456789999997 559999999999877 57788775543222111110 0 00000 011234444444
Q ss_pred ccccCCceEEEeccCCCCCCCCChhhhHHHHhcCccEEEEcCc
Q 010075 80 NSFISEKITFVPGDISSEDLGLKDSNLKEELWNELDIMVNSAA 122 (519)
Q Consensus 80 ~~~~~~~v~~v~gDl~~~~lgls~~~~~~~l~~~vdiViH~Aa 122 (519)
.-++..+..++.+ .. ...+++.|+||.+.-
T Consensus 106 ----~v~i~~~~~~i~~-------~~--~~~~~~~DlVi~~~D 135 (426)
T d1yovb1 106 ----NCNVVPHFNKIQD-------FN--DTFYRQFHIIVCGLD 135 (426)
T ss_dssp ----TCCCEEECSCGGG-------BC--HHHHTTCSEEEECCS
T ss_pred ----CCceEeeeccccc-------hH--HHHHHhcchheeccC
Confidence 2467788877763 22 256789999998753
|
| >d2f1ka2 c.2.1.6 (A:1-165) Prephenate dehydrogenase TyrA {Synechocystis sp. pcc 6803 [TaxId: 1148]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Prephenate dehydrogenase TyrA species: Synechocystis sp. pcc 6803 [TaxId: 1148]
Probab=86.91 E-value=0.91 Score=37.63 Aligned_cols=33 Identities=21% Similarity=0.212 Sum_probs=28.1
Q ss_pred CEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecC
Q 010075 13 KTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAA 49 (519)
Q Consensus 13 k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~ 49 (519)
|+|.|.| +|.+|..+++.|.+.| ++|++..|++
T Consensus 1 MkI~iIG-~G~mG~~lA~~l~~~g---~~V~~~d~~~ 33 (165)
T d2f1ka2 1 MKIGVVG-LGLIGASLAGDLRRRG---HYLIGVSRQQ 33 (165)
T ss_dssp CEEEEEC-CSHHHHHHHHHHHHTT---CEEEEECSCH
T ss_pred CEEEEEe-ecHHHHHHHHHHHHCC---CEEEEEECCc
Confidence 5788997 5999999999999998 6778887763
|
| >d2fzwa2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Human (Homo sapiens), different isozymes [TaxId: 9606]
Probab=86.48 E-value=1.1 Score=37.40 Aligned_cols=39 Identities=15% Similarity=-0.001 Sum_probs=28.6
Q ss_pred cCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCc
Q 010075 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADI 51 (519)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~ 51 (519)
-.|.+|+|.|+ |.+|...+..+...|. .+|++..++...
T Consensus 27 ~~G~tVlI~Ga-GGvG~~aiq~ak~~G~--~~vi~~~~~~~k 65 (176)
T d2fzwa2 27 EPGSVCAVFGL-GGVGLAVIMGCKVAGA--SRIIGVDINKDK 65 (176)
T ss_dssp CTTCEEEEECC-SHHHHHHHHHHHHHTC--SEEEEECSCGGG
T ss_pred CCCCEEEEecc-hhHHHHHHHHHHHHhc--CceEEEcccHHH
Confidence 35789999998 5689888888877774 567776665433
|
| >d1nvmb1 c.2.1.3 (B:1-131,B:287-312) Acetaldehyde dehydrogenase (acylating) {Pseudomonas sp. [TaxId: 306]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Acetaldehyde dehydrogenase (acylating) species: Pseudomonas sp. [TaxId: 306]
Probab=86.45 E-value=0.59 Score=39.00 Aligned_cols=36 Identities=19% Similarity=0.299 Sum_probs=27.1
Q ss_pred CCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEE-ecC
Q 010075 12 NKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFV-RAA 49 (519)
Q Consensus 12 ~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~Lv-R~~ 49 (519)
..+|.|.| ||.+|+.++.++++..|.+ +++++. |+.
T Consensus 4 kirvaIIG-aG~ig~~~~~~~l~~~~~~-el~avas~~~ 40 (157)
T d1nvmb1 4 KLKVAIIG-SGNIGTDLMIKVLRNAKYL-EMGAMVGIDA 40 (157)
T ss_dssp CEEEEEEC-CSHHHHHHHHHHHHHCSSE-EEEEEECSCT
T ss_pred CcEEEEEc-CcHHHHHHHHHHHhhCCcc-eEEEEEecch
Confidence 35899999 9999998777788877765 666664 443
|
| >d1diha1 c.2.1.3 (A:2-130,A:241-273) Dihydrodipicolinate reductase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Dihydrodipicolinate reductase species: Escherichia coli [TaxId: 562]
Probab=86.40 E-value=0.45 Score=39.97 Aligned_cols=37 Identities=19% Similarity=0.288 Sum_probs=27.1
Q ss_pred CCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecC
Q 010075 12 NKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAA 49 (519)
Q Consensus 12 ~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~ 49 (519)
..+|.|.|++|=+|+.+++.+++. +++.=+.++.|+.
T Consensus 4 ~ikI~i~Ga~GrMG~~i~~~i~~~-~~~~lv~~~~~~~ 40 (162)
T d1diha1 4 NIRVAIAGAGGRMGRQLIQAALAL-EGVQLGAALEREG 40 (162)
T ss_dssp BEEEEETTTTSHHHHHHHHHHHHS-TTEECCCEECCTT
T ss_pred CCEEEEECCCCHHHHHHHHHHHhC-CCCEEEEEEeccc
Confidence 358999999999999999999875 3543334444543
|
| >d2g5ca2 c.2.1.6 (A:30-200) Prephenate dehydrogenase TyrA {Aquifex aeolicus [TaxId: 63363]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Prephenate dehydrogenase TyrA species: Aquifex aeolicus [TaxId: 63363]
Probab=86.09 E-value=0.29 Score=41.04 Aligned_cols=35 Identities=23% Similarity=0.431 Sum_probs=29.5
Q ss_pred CEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecC
Q 010075 13 KTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAA 49 (519)
Q Consensus 13 k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~ 49 (519)
|+|+|.| .|.+|..+++.|.+.++++ +|++..|++
T Consensus 2 k~I~IIG-~G~mG~sla~~L~~~g~~~-~I~~~D~~~ 36 (171)
T d2g5ca2 2 QNVLIVG-VGFMGGSFAKSLRRSGFKG-KIYGYDINP 36 (171)
T ss_dssp CEEEEES-CSHHHHHHHHHHHHTTCCS-EEEEECSCH
T ss_pred CEEEEEc-cCHHHHHHHHHHHhcCCCe-EEEEEECCh
Confidence 5799998 6999999999999988764 788887764
|
| >d2csua1 c.2.1.8 (A:1-129) Acetate-CoA ligase alpha chain, AcdA, N-terminal domain {Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: CoA-binding domain domain: Acetate-CoA ligase alpha chain, AcdA, N-terminal domain species: Pyrococcus horikoshii [TaxId: 53953]
Probab=85.69 E-value=1.1 Score=35.92 Aligned_cols=38 Identities=18% Similarity=0.201 Sum_probs=30.7
Q ss_pred hhcCCCEEEEeCCc---cHHHHHHHHHHHHhCCCccEEEEEEe
Q 010075 8 EFLENKTILVSGVT---GFVAKVFIEKILRVQPNVKKLYLFVR 47 (519)
Q Consensus 8 ~~~~~k~VlITGaT---GFlG~~Lv~~LL~~g~~v~~V~~LvR 47 (519)
.+|+.++|.|.||| |-.|..+++.|.+.+ -.+||.+..
T Consensus 4 ~lf~PksIAVVGaS~~~~~~g~~v~~~L~~~~--~g~v~pVnP 44 (129)
T d2csua1 4 YFFNPKGIAVIGASNDPKKLGYEVFKNLKEYK--KGKVYPVNI 44 (129)
T ss_dssp TTTSCSEEEEETCCSCTTSHHHHHHHHHTTCC--SSEEEEECS
T ss_pred HhCCCCeEEEEccCCCCCCcHHHHHHHHHHcC--CCcEEEecc
Confidence 47889999999999 999999999987644 257887644
|
| >d1bg6a2 c.2.1.6 (A:4-187) N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {Arthrobacter, strain 1c [TaxId: 1663]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: N-(1-D-carboxylethyl)-L-norvaline dehydrogenase species: Arthrobacter, strain 1c [TaxId: 1663]
Probab=85.59 E-value=0.59 Score=39.27 Aligned_cols=34 Identities=21% Similarity=0.190 Sum_probs=29.5
Q ss_pred CCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecC
Q 010075 12 NKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAA 49 (519)
Q Consensus 12 ~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~ 49 (519)
.|+|.|.|| |-+|..++..|.+.| ++|++..|.+
T Consensus 1 sk~iaIiGa-G~~G~~~A~~l~~~G---~~V~~~~r~~ 34 (184)
T d1bg6a2 1 SKTYAVLGL-GNGGHAFAAYLALKG---QSVLAWDIDA 34 (184)
T ss_dssp CCEEEEECC-SHHHHHHHHHHHHTT---CEEEEECSCH
T ss_pred CCEEEEECc-cHHHHHHHHHHHHCC---CEEEEEECCH
Confidence 378999995 999999999999999 5778888864
|
| >d1j4aa1 c.2.1.4 (A:104-300) D-lactate dehydrogenase {Lactobacillus helveticus [TaxId: 1587]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: D-lactate dehydrogenase species: Lactobacillus helveticus [TaxId: 1587]
Probab=85.25 E-value=2.1 Score=36.82 Aligned_cols=37 Identities=19% Similarity=0.359 Sum_probs=29.9
Q ss_pred cCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCC
Q 010075 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAAD 50 (519)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~ 50 (519)
+.|++|.|.| .|-||+.+++.|..-| .+|++..+..+
T Consensus 41 l~gk~vgIiG-~G~IG~~va~~l~~fg---~~V~~~d~~~~ 77 (197)
T d1j4aa1 41 VRDQVVGVVG-TGHIGQVFMQIMEGFG---AKVITYDIFRN 77 (197)
T ss_dssp GGGSEEEEEC-CSHHHHHHHHHHHHTT---CEEEEECSSCC
T ss_pred ccCCeEEEec-ccccchhHHHhHhhhc---ccccccCcccc
Confidence 5689999998 8999999999997766 57777665543
|
| >d1sc6a1 c.2.1.4 (A:108-295) Phosphoglycerate dehydrogenase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: Phosphoglycerate dehydrogenase species: Escherichia coli [TaxId: 562]
Probab=85.04 E-value=3.4 Score=35.00 Aligned_cols=91 Identities=8% Similarity=0.066 Sum_probs=54.0
Q ss_pred cCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 010075 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (519)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (519)
..+++|.|.| .|.||+.+++.|..-+ .+|+...+..+...... ....-++.+-+ ...+..
T Consensus 42 l~~~~vgiiG-~G~IG~~va~~l~~fg---~~v~~~d~~~~~~~~~~------~~~~~l~ell~----------~sDii~ 101 (188)
T d1sc6a1 42 ARGKKLGIIG-YGHIGTQLGILAESLG---MYVYFYDIENKLPLGNA------TQVQHLSDLLN----------MSDVVS 101 (188)
T ss_dssp STTCEEEEEC-CSHHHHHHHHHHHHTT---CEEEEECSSCCCCCTTC------EECSCHHHHHH----------HCSEEE
T ss_pred ccceEEEEee-cccchhhhhhhccccc---ceEeeccccccchhhhh------hhhhhHHHHHh----------hcccee
Confidence 5789999997 8999999999887766 57888777543221100 00000011111 145667
Q ss_pred EeccCCCCCCCCChhhhHHHHhcCccEEEEcC
Q 010075 90 VPGDISSEDLGLKDSNLKEELWNELDIMVNSA 121 (519)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~~~vdiViH~A 121 (519)
+...++....++=+++.. ....+=-++||.|
T Consensus 102 i~~plt~~T~~li~~~~l-~~mk~~a~lIN~a 132 (188)
T d1sc6a1 102 LHVPENPSTKNMMGAKEI-SLMKPGSLLINAS 132 (188)
T ss_dssp ECCCSSTTTTTCBCHHHH-HHSCTTEEEEECS
T ss_pred ecccCCcchhhhccHHHH-hhCCCCCEEEEcC
Confidence 777777766666666655 4444444555554
|
| >d1e3ia2 c.2.1.1 (A:168-341) Alcohol dehydrogenase {Mouse (Mus musculus), class II [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Mouse (Mus musculus), class II [TaxId: 10090]
Probab=84.92 E-value=1.9 Score=36.18 Aligned_cols=38 Identities=16% Similarity=0.077 Sum_probs=29.8
Q ss_pred cCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCC
Q 010075 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAAD 50 (519)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~ 50 (519)
-.|.+|+|.|+ |.+|...+..+...|. .+|++..++..
T Consensus 27 ~~G~~VlV~G~-G~iGl~a~~~ak~~Ga--~~Vi~~d~~~~ 64 (174)
T d1e3ia2 27 TPGSTCAVFGL-GCVGLSAIIGCKIAGA--SRIIAIDINGE 64 (174)
T ss_dssp CTTCEEEEECC-SHHHHHHHHHHHHTTC--SEEEEECSCGG
T ss_pred CCCCEEEEECC-ChHHHHHHHHHHHhCC--ceeeeeccchH
Confidence 46789999985 9999998888877774 57777777654
|
| >d1f06a1 c.2.1.3 (A:1-118,A:269-320) Diaminopimelic acid dehydrogenase (DAPDH) {Corynebacterium glutamicum [TaxId: 1718]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Diaminopimelic acid dehydrogenase (DAPDH) species: Corynebacterium glutamicum [TaxId: 1718]
Probab=84.69 E-value=2.6 Score=34.98 Aligned_cols=37 Identities=22% Similarity=0.412 Sum_probs=26.2
Q ss_pred cCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEec
Q 010075 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRA 48 (519)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~ 48 (519)
|+..+|.|.| +|.+|+..++.|.+ .+++.-|.+..|+
T Consensus 1 M~kirvgiiG-~G~ig~~~~~~l~~-~~~~elvav~~~~ 37 (170)
T d1f06a1 1 MTNIRVAIVG-YGNLGRSVEKLIAK-QPDMDLVGIFSRR 37 (170)
T ss_dssp CCCEEEEEEC-CSHHHHHHHHHHTT-CSSEEEEEEEESS
T ss_pred CCcceEEEEC-ChHHHHHHHHHHHh-CCCcEEEEEEecc
Confidence 3456899998 69999999988876 5676444344444
|
| >d1kyqa1 c.2.1.11 (A:1-150) Bifunctional dehydrogenase/ferrochelatase Met8p, N-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Siroheme synthase N-terminal domain-like domain: Bifunctional dehydrogenase/ferrochelatase Met8p, N-terminal domain species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=84.27 E-value=0.44 Score=39.22 Aligned_cols=35 Identities=31% Similarity=0.307 Sum_probs=30.0
Q ss_pred hcCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEe
Q 010075 9 FLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVR 47 (519)
Q Consensus 9 ~~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR 47 (519)
.++||+|+|.|| |.+|..-++.|++.| .+|+++..
T Consensus 10 ~l~gkrvLViGg-G~va~~ka~~Ll~~G---A~VtVvap 44 (150)
T d1kyqa1 10 QLKDKRILLIGG-GEVGLTRLYKLMPTG---CKLTLVSP 44 (150)
T ss_dssp CCTTCEEEEEEE-SHHHHHHHHHHGGGT---CEEEEEEE
T ss_pred eeCCCEEEEECC-CHHHHHHHHHHHHCC---CEEEEEeC
Confidence 378999999996 899999999999999 56777653
|
| >d1mx3a1 c.2.1.4 (A:126-318) Transcription corepressor CtbP {Human (Homo sapiens), Ctbp1 [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: Transcription corepressor CtbP species: Human (Homo sapiens), Ctbp1 [TaxId: 9606]
Probab=83.01 E-value=2.4 Score=36.29 Aligned_cols=94 Identities=10% Similarity=0.052 Sum_probs=55.3
Q ss_pred cCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 010075 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (519)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (519)
..|++|.|.| .|-||+.+++.|..-| -+|+...|....... ... ......-++.+-+ ...+..
T Consensus 47 L~gktvgIiG-~G~IG~~va~~l~~fg---~~v~~~d~~~~~~~~-~~~--~~~~~~~l~~ll~----------~sD~i~ 109 (193)
T d1mx3a1 47 IRGETLGIIG-LGRVGQAVALRAKAFG---FNVLFYDPYLSDGVE-RAL--GLQRVSTLQDLLF----------HSDCVT 109 (193)
T ss_dssp CTTCEEEEEC-CSHHHHHHHHHHHTTT---CEEEEECTTSCTTHH-HHH--TCEECSSHHHHHH----------HCSEEE
T ss_pred eeCceEEEec-cccccccceeeeeccc---cceeeccCcccccch-hhh--ccccccchhhccc----------cCCEEE
Confidence 5789999998 8999999999998766 577777765443211 110 0000000111111 145677
Q ss_pred EeccCCCCCCCCChhhhHHHHhcCccEEEEcC
Q 010075 90 VPGDISSEDLGLKDSNLKEELWNELDIMVNSA 121 (519)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~~~vdiViH~A 121 (519)
+...+++...++-+.+.. ...++--++||.|
T Consensus 110 ~~~plt~~T~~li~~~~l-~~mk~~a~lIN~s 140 (193)
T d1mx3a1 110 LHCGLNEHNHHLINDFTV-KQMRQGAFLVNTA 140 (193)
T ss_dssp ECCCCCTTCTTSBSHHHH-TTSCTTEEEEECS
T ss_pred EeecccccchhhhhHHHH-hccCCCCeEEecC
Confidence 777888777777666554 3444444556654
|
| >d1d7ya2 c.3.1.5 (A:116-236) NADH-dependent ferredoxin reductase, BphA4 {Pseudomonas sp., KKS102 [TaxId: 306]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: NADH-dependent ferredoxin reductase, BphA4 species: Pseudomonas sp., KKS102 [TaxId: 306]
Probab=82.95 E-value=0.9 Score=35.87 Aligned_cols=36 Identities=11% Similarity=0.174 Sum_probs=31.6
Q ss_pred CCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCC
Q 010075 11 ENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAAD 50 (519)
Q Consensus 11 ~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~ 50 (519)
.+++|+|.| .||+|-.++..|.+.| .+|.++.|++.
T Consensus 29 ~~~~vvIIG-gG~iG~E~A~~l~~~g---~~Vtli~~~~~ 64 (121)
T d1d7ya2 29 PQSRLLIVG-GGVIGLELAATARTAG---VHVSLVETQPR 64 (121)
T ss_dssp TTCEEEEEC-CSHHHHHHHHHHHHTT---CEEEEEESSSS
T ss_pred cCCeEEEEC-cchhHHHHHHHhhccc---ceEEEEeeccc
Confidence 368999998 6999999999999988 78899998874
|
| >d1q0qa2 c.2.1.3 (A:1-125,A:275-300) 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: 1-deoxy-D-xylulose-5-phosphate reductoisomerase species: Escherichia coli [TaxId: 562]
Probab=82.80 E-value=1.1 Score=37.06 Aligned_cols=39 Identities=15% Similarity=0.316 Sum_probs=31.7
Q ss_pred CEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcc
Q 010075 13 KTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADID 52 (519)
Q Consensus 13 k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~ 52 (519)
|+|.|.|+||-||+..++-+.+ .|+-.+|++|+-.++-.
T Consensus 2 K~I~IlGsTGSIG~~tL~Vi~~-~~d~f~v~~Lsa~~N~~ 40 (151)
T d1q0qa2 2 KQLTILGSTGSIGCSTLDVVRH-NPEHFRVVALVAGKNVT 40 (151)
T ss_dssp EEEEEETTTSHHHHHHHHHHHH-CTTTEEEEEEEESSCHH
T ss_pred CeEEEEcCCcHHHHHHHHHHHh-CCCCcEEEEEEecCcHH
Confidence 6799999999999999987755 67667999998766543
|
| >d2naca1 c.2.1.4 (A:148-335) Formate dehydrogenase {Pseudomonas sp., strain 101 [TaxId: 306]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: Formate dehydrogenase species: Pseudomonas sp., strain 101 [TaxId: 306]
Probab=82.77 E-value=2.2 Score=36.32 Aligned_cols=95 Identities=12% Similarity=0.110 Sum_probs=57.3
Q ss_pred cCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 010075 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (519)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (519)
..+++|.|.| .|-||+.++++|..-+ -+|+...|............ ... +..+.+.. ....+..
T Consensus 42 l~~~~vgiiG-~G~IG~~va~~l~~fg---~~v~~~d~~~~~~~~~~~~~--~~~---~~~l~~~l-------~~sD~v~ 105 (188)
T d2naca1 42 LEAMHVGTVA-AGRIGLAVLRRLAPFD---VHLHYTDRHRLPESVEKELN--LTW---HATREDMY-------PVCDVVT 105 (188)
T ss_dssp CTTCEEEEEC-CSHHHHHHHHHHGGGT---CEEEEECSSCCCHHHHHHHT--CEE---CSSHHHHG-------GGCSEEE
T ss_pred ccccceeecc-ccccchhhhhhhhccC---ceEEEEeecccccccccccc--ccc---cCCHHHHH-------Hhccchh
Confidence 4689999998 8999999999998766 57788887654432221110 000 00000000 1255677
Q ss_pred EeccCCCCCCCCChhhhHHHHhcCccEEEEcC
Q 010075 90 VPGDISSEDLGLKDSNLKEELWNELDIMVNSA 121 (519)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~~~vdiViH~A 121 (519)
+...+++..-++=..+.. ...++=-++||+|
T Consensus 106 ~~~plt~~T~~li~~~~l-~~mk~ga~lIN~a 136 (188)
T d2naca1 106 LNCPLHPETEHMINDETL-KLFKRGAYIVNTA 136 (188)
T ss_dssp ECSCCCTTTTTCBSHHHH-TTSCTTEEEEECS
T ss_pred hcccccccchhhhHHHHH-HhCCCCCEEEecC
Confidence 777888777666566655 4444445667665
|
| >d1npya1 c.2.1.7 (A:103-269) Shikimate 5-dehydrogenase-like protein HI0607 {Haemophilus influenzae [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Shikimate 5-dehydrogenase-like protein HI0607 species: Haemophilus influenzae [TaxId: 727]
Probab=82.42 E-value=0.38 Score=40.50 Aligned_cols=37 Identities=24% Similarity=0.394 Sum_probs=31.3
Q ss_pred CCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCC
Q 010075 11 ENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAAD 50 (519)
Q Consensus 11 ~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~ 50 (519)
++++|+|.|+ |..|++++..|.+.|. .+|+++.|+..
T Consensus 16 ~~~~vlIlGa-GGaarai~~aL~~~g~--~~I~I~nR~~~ 52 (167)
T d1npya1 16 KNAKVIVHGS-GGMAKAVVAAFKNSGF--EKLKIYARNVK 52 (167)
T ss_dssp TTSCEEEECS-STTHHHHHHHHHHTTC--CCEEEECSCHH
T ss_pred CCCeEEEECC-CHHHHHHHHHHHHCCC--CEEEEecccHH
Confidence 5789999985 8899999999998774 67899988753
|
| >d1qp8a1 c.2.1.4 (A:83-263) Putative formate dehydrogenase {Archaeon Pyrobaculum aerophilum [TaxId: 13773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: Putative formate dehydrogenase species: Archaeon Pyrobaculum aerophilum [TaxId: 13773]
Probab=82.32 E-value=2 Score=36.33 Aligned_cols=37 Identities=14% Similarity=0.222 Sum_probs=31.2
Q ss_pred cCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCC
Q 010075 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAAD 50 (519)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~ 50 (519)
+.|++|.|.| .|-||+.+++.+..-| .+|+...|.++
T Consensus 40 l~gk~vgIiG-~G~IG~~va~~l~~~g---~~v~~~d~~~~ 76 (181)
T d1qp8a1 40 IQGEKVAVLG-LGEIGTRVGKILAALG---AQVRGFSRTPK 76 (181)
T ss_dssp CTTCEEEEES-CSTHHHHHHHHHHHTT---CEEEEECSSCC
T ss_pred ccCceEEEec-cccccccceeeeeccc---ccccccccccc
Confidence 6799999998 7889999999998777 57888877653
|
| >d1wdka3 c.2.1.6 (A:311-496) Fatty oxidation complex alpha subunit, middle domain {Pseudomonas fragi [TaxId: 296]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Fatty oxidation complex alpha subunit, middle domain species: Pseudomonas fragi [TaxId: 296]
Probab=82.10 E-value=0.51 Score=40.45 Aligned_cols=34 Identities=12% Similarity=0.044 Sum_probs=28.5
Q ss_pred CEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCC
Q 010075 13 KTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAAD 50 (519)
Q Consensus 13 k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~ 50 (519)
++|.|.|| |.+|..++..+++.| .+|.+..++..
T Consensus 5 ~~vaViGa-G~mG~~iA~~~a~~G---~~V~l~D~~~~ 38 (186)
T d1wdka3 5 KQAAVLGA-GIMGGGIAYQSASKG---TPILMKDINEH 38 (186)
T ss_dssp SSEEEECC-HHHHHHHHHHHHHTT---CCEEEECSSHH
T ss_pred CEEEEECc-CHHHHHHHHHHHhCC---CeEEEEECCHH
Confidence 67999996 999999999999998 56678777643
|
| >d1mv8a2 c.2.1.6 (A:1-202) GDP-mannose 6-dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: GDP-mannose 6-dehydrogenase species: Pseudomonas aeruginosa [TaxId: 287]
Probab=81.71 E-value=0.53 Score=40.85 Aligned_cols=32 Identities=16% Similarity=0.119 Sum_probs=27.0
Q ss_pred CEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEec
Q 010075 13 KTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRA 48 (519)
Q Consensus 13 k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~ 48 (519)
|+|.|.| .||+|..++..|.+.| ++|++....
T Consensus 1 MkI~ViG-lG~vGl~~a~~la~~g---~~V~g~D~n 32 (202)
T d1mv8a2 1 MRISIFG-LGYVGAVCAGCLSARG---HEVIGVDVS 32 (202)
T ss_dssp CEEEEEC-CSTTHHHHHHHHHHTT---CEEEEECSC
T ss_pred CEEEEEC-CCHhHHHHHHHHHhCC---CcEEEEeCC
Confidence 5788996 8999999999999999 567777654
|
| >d1d1ta2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Human (Homo sapiens), different isozymes [TaxId: 9606]
Probab=81.01 E-value=2.7 Score=35.21 Aligned_cols=40 Identities=18% Similarity=0.028 Sum_probs=31.9
Q ss_pred cCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcc
Q 010075 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADID 52 (519)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~ 52 (519)
-.|.+|+|.|+ |.+|...+..+...|. .+|+++.++....
T Consensus 28 ~~g~tVlI~G~-GgvGl~ai~~ak~~G~--~~Vi~vd~~~~kl 67 (176)
T d1d1ta2 28 KPGSTCVVFGL-GGVGLSVIMGCKSAGA--SRIIGIDLNKDKF 67 (176)
T ss_dssp CTTCEEEEECC-SHHHHHHHHHHHHTTC--SEEEEECSCGGGH
T ss_pred CCCCEEEEECC-CchhHHHHHHHHHcCC--ceEEEecCcHHHH
Confidence 46889999985 9999999988877664 6899998876543
|
| >d1llua2 c.2.1.1 (A:144-309) Alcohol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Pseudomonas aeruginosa [TaxId: 287]
Probab=80.71 E-value=2 Score=35.40 Aligned_cols=36 Identities=11% Similarity=0.092 Sum_probs=28.0
Q ss_pred cCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecC
Q 010075 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAA 49 (519)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~ 49 (519)
-.|.+|+|.|+ |.+|...+.-+...| .+|++..+++
T Consensus 26 ~~g~~VlV~Ga-G~vG~~~~~~ak~~G---~~Vi~~~~~~ 61 (166)
T d1llua2 26 RPGQWVAISGI-GGLGHVAVQYARAMG---LHVAAIDIDD 61 (166)
T ss_dssp CTTCEEEEECC-SHHHHHHHHHHHHTT---CEEEEEESCH
T ss_pred CCCCEEEEeec-cccHHHHHHHHHHcC---Cccceecchh
Confidence 46889999986 899988877666655 5788887763
|
| >d1dxya1 c.2.1.4 (A:101-299) D-2-hydroxyisocaproate dehydrogenase {Lactobacillus casei [TaxId: 1582]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: D-2-hydroxyisocaproate dehydrogenase species: Lactobacillus casei [TaxId: 1582]
Probab=80.67 E-value=4.1 Score=34.84 Aligned_cols=36 Identities=25% Similarity=0.303 Sum_probs=29.7
Q ss_pred cCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecC
Q 010075 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAA 49 (519)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~ 49 (519)
+.||+|.|.| .|-||+.+++.|..-| -+|++..|..
T Consensus 43 l~~ktvgIiG-~G~IG~~va~~l~~fg---~~v~~~d~~~ 78 (199)
T d1dxya1 43 LGQQTVGVMG-TGHIGQVAIKLFKGFG---AKVIAYDPYP 78 (199)
T ss_dssp GGGSEEEEEC-CSHHHHHHHHHHHHTT---CEEEEECSSC
T ss_pred ccceeeeeee-cccccccccccccccc---eeeeccCCcc
Confidence 4679999998 8999999999998766 5778777654
|
| >d1yl7a1 c.2.1.3 (A:2-105,A:215-245) Dihydrodipicolinate reductase {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Dihydrodipicolinate reductase species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=80.50 E-value=1.6 Score=35.20 Aligned_cols=30 Identities=17% Similarity=0.223 Sum_probs=23.2
Q ss_pred EEEEeCCccHHHHHHHHHHHHhCCCccEEEEE
Q 010075 14 TILVSGVTGFVAKVFIEKILRVQPNVKKLYLF 45 (519)
Q Consensus 14 ~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~L 45 (519)
+|.|.|++|=+|+.+++.+.+. ++. ++...
T Consensus 1 kI~v~Ga~GrMG~~i~~~i~~~-~~~-~l~~~ 30 (135)
T d1yl7a1 1 RVGVLGAKGKVGATMVRAVAAA-DDL-TLSAE 30 (135)
T ss_dssp EEEEETTTSHHHHHHHHHHHHS-TTS-EEEEE
T ss_pred CEEEECCCCHHHHHHHHHHHhC-CCC-EEEEE
Confidence 6899999999999999988764 454 44433
|
| >d2fy8a1 c.2.1.9 (A:116-244) Potassium channel-related protein MthK {Archaeon Methanothermobacter thermautotrophicus [TaxId: 145262]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Potassium channel NAD-binding domain domain: Potassium channel-related protein MthK species: Archaeon Methanothermobacter thermautotrophicus [TaxId: 145262]
Probab=80.21 E-value=1.2 Score=35.18 Aligned_cols=69 Identities=10% Similarity=0.227 Sum_probs=43.6
Q ss_pred CEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEEec
Q 010075 13 KTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVPG 92 (519)
Q Consensus 13 k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~~~~~~~~rl~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v~g 92 (519)
|.|+|.|. |-+|..+++.|.. ..|.++...... .+.+. ...+.++.|
T Consensus 1 kHivI~G~-g~~g~~l~~~L~~-----~~i~vi~~d~~~---~~~~~------------------------~~~~~~i~G 47 (129)
T d2fy8a1 1 RHVVICGW-SESTLECLRELRG-----SEVFVLAEDENV---RKKVL------------------------RSGANFVHG 47 (129)
T ss_dssp CCEEEESC-CHHHHHHHHTSCG-----GGEEEEESCTTH---HHHHH------------------------HTTCEEEES
T ss_pred CEEEEECC-CHHHHHHHHHHcC-----CCCEEEEcchHH---HHHHH------------------------hcCcccccc
Confidence 56889985 7789999999853 235566554332 22221 256789999
Q ss_pred cCCCCCCCCChhhhHHHHhcCccEEEEc
Q 010075 93 DISSEDLGLKDSNLKEELWNELDIMVNS 120 (519)
Q Consensus 93 Dl~~~~lgls~~~~~~~l~~~vdiViH~ 120 (519)
|.++ ++.+.+.-+++.+.++=+
T Consensus 48 d~~~------~~~L~~a~i~~A~~vi~~ 69 (129)
T d2fy8a1 48 DPTR------VSDLEKANVRGARAVIVN 69 (129)
T ss_dssp CTTS------HHHHHHTTCTTCSEEEEC
T ss_pred ccCC------HHHHHHhhhhcCcEEEEe
Confidence 9995 333332334678888754
|
| >d1yova1 c.111.1.2 (A:6-534) Amyloid beta precursor protein-binding protein 1, APPBP1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Activating enzymes of the ubiquitin-like proteins superfamily: Activating enzymes of the ubiquitin-like proteins family: Ubiquitin activating enzymes (UBA) domain: Amyloid beta precursor protein-binding protein 1, APPBP1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=80.09 E-value=1.1 Score=45.03 Aligned_cols=39 Identities=8% Similarity=0.117 Sum_probs=30.6
Q ss_pred hhcCCCEEEEeCCccHHHHHHHHHHHHhCCCccEEEEEEecC
Q 010075 8 EFLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAA 49 (519)
Q Consensus 8 ~~~~~k~VlITGaTGFlG~~Lv~~LL~~g~~v~~V~~LvR~~ 49 (519)
+-+++.+|+|.|+ |.+|..+++-|...| |+++.++....
T Consensus 21 ~~L~~s~VlvvG~-gglG~Ei~knLvl~G--Vg~itivD~d~ 59 (529)
T d1yova1 21 EALESAHVCLINA-TATGTEILKNLVLPG--IGSFTIIDGNQ 59 (529)
T ss_dssp HHHHHCEEEECCC-SHHHHHHHHHHHTTT--CSEEEEECCSB
T ss_pred HHHhCCCEEEECC-CHHHHHHHHHHHHhc--CCEEEEEcCCc
Confidence 3456789999997 569999999999865 68888875433
|