BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 010078
(518 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 192 bits (488), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 103/226 (45%), Positives = 149/226 (65%), Gaps = 8/226 (3%)
Query: 282 DGTDVWEIDPKHLKFGSKVASGSYGDLYRGTYCSQDVAIKVLKPERINSDMQKEFAQEVF 341
DG D+ +I L K+ +GS+G ++R + DVA+K+L + +++ EF +EV
Sbjct: 28 DGDDM-DIPWCDLNIKEKIGAGSFGTVHRAEWHGSDVAVKILMEQDFHAERVNEFLREVA 86
Query: 342 IMRKVRHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSL--LKVAIDV 399
IM+++RH N+V F+GA T+PP+L IVTE++S GS+Y LHK +L L +A DV
Sbjct: 87 IMKRLRHPNIVLFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDV 146
Query: 400 SKGMNYLHQNN--IIHRDLKAANLLMDENEVVKVADFGVARVKAQSGVMT-AETGTYRWM 456
+KGMNYLH N I+HRDLK+ NLL+D+ VKV DFG++R+KA + + GT WM
Sbjct: 147 AKGMNYLHNRNPPIVHRDLKSPNLLVDKKYTVKVCDFGLSRLKASXFLXSKXAAGTPEWM 206
Query: 457 APEVIEHKPYDHKADVFSFGIVLWELLTGKLPYEYLTPLQ--AAVG 500
APEV+ +P + K+DV+SFG++LWEL T + P+ L P Q AAVG
Sbjct: 207 APEVLRDEPSNEKSDVYSFGVILWELATLQQPWGNLNPAQVVAAVG 252
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 191 bits (486), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 102/226 (45%), Positives = 151/226 (66%), Gaps = 8/226 (3%)
Query: 282 DGTDVWEIDPKHLKFGSKVASGSYGDLYRGTYCSQDVAIKVLKPERINSDMQKEFAQEVF 341
DG D+ +I L K+ +GS+G ++R + DVA+K+L + +++ EF +EV
Sbjct: 28 DGDDM-DIPWCDLNIKEKIGAGSFGTVHRAEWHGSDVAVKILMEQDFHAERVNEFLREVA 86
Query: 342 IMRKVRHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSL--LKVAIDV 399
IM+++RH N+V F+GA T+PP+L IVTE++S GS+Y LHK +L L +A DV
Sbjct: 87 IMKRLRHPNIVLFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDV 146
Query: 400 SKGMNYLHQNN--IIHRDLKAANLLMDENEVVKVADFGVARVKAQSGVMT-AETGTYRWM 456
+KGMNYLH N I+HR+LK+ NLL+D+ VKV DFG++R+KA + + + + GT WM
Sbjct: 147 AKGMNYLHNRNPPIVHRNLKSPNLLVDKKYTVKVCDFGLSRLKASTFLSSKSAAGTPEWM 206
Query: 457 APEVIEHKPYDHKADVFSFGIVLWELLTGKLPYEYLTPLQ--AAVG 500
APEV+ +P + K+DV+SFG++LWEL T + P+ L P Q AAVG
Sbjct: 207 APEVLRDEPSNEKSDVYSFGVILWELATLQQPWGNLNPAQVVAAVG 252
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 178 bits (452), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 91/214 (42%), Positives = 138/214 (64%), Gaps = 8/214 (3%)
Query: 282 DGTDVWEIDPKHLKFGSKVASGSYGDLYRGTYCSQDVAIKVLKPERINSDMQKEFAQEVF 341
D +D WEI + G ++ SGS+G +Y+G + DVA+K+L + F EV
Sbjct: 2 DSSDDWEIPDGQITVGQRIGSGSFGTVYKGKWHG-DVAVKMLNVTAPTPQQLQAFKNEVG 60
Query: 342 IMRKVRHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSK 401
++RK RH N++ F+G TKP L IVT++ G S+Y +LH + F++ L+ +A ++
Sbjct: 61 VLRKTRHVNILLFMGYSTKP-QLAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTAR 119
Query: 402 GMNYLHQNNIIHRDLKAANLLMDENEVVKVADFGVARVKAQ-SGVMTAE--TGTYRWMAP 458
GM+YLH +IIHRDLK+ N+ + E+ VK+ DFG+A VK++ SG E +G+ WMAP
Sbjct: 120 GMDYLHAKSIIHRDLKSNNIFLHEDNTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAP 179
Query: 459 EVI---EHKPYDHKADVFSFGIVLWELLTGKLPY 489
EVI + PY ++DV++FGIVL+EL+TG+LPY
Sbjct: 180 EVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPY 213
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 177 bits (449), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 91/214 (42%), Positives = 139/214 (64%), Gaps = 8/214 (3%)
Query: 282 DGTDVWEIDPKHLKFGSKVASGSYGDLYRGTYCSQDVAIKVLKPERINSDMQKEFAQEVF 341
D +D WEI + G ++ SGS+G +Y+G + DVA+K+L + F EV
Sbjct: 25 DSSDDWEIPDGQITVGQRIGSGSFGTVYKGKWHG-DVAVKMLNVTAPTPQQLQAFKNEVG 83
Query: 342 IMRKVRHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSK 401
++RK RH N++ F+G TKP L IVT++ G S+Y +LH ++ F++ L+ +A ++
Sbjct: 84 VLRKTRHVNILLFMGYSTKP-QLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQ 142
Query: 402 GMNYLHQNNIIHRDLKAANLLMDENEVVKVADFGVARVKAQ-SGVMTAE--TGTYRWMAP 458
GM+YLH +IIHRDLK+ N+ + E+ VK+ DFG+A VK++ SG E +G+ WMAP
Sbjct: 143 GMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAP 202
Query: 459 EVI---EHKPYDHKADVFSFGIVLWELLTGKLPY 489
EVI + PY ++DV++FGIVL+EL+TG+LPY
Sbjct: 203 EVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPY 236
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 177 bits (448), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 91/215 (42%), Positives = 140/215 (65%), Gaps = 8/215 (3%)
Query: 281 NDGTDVWEIDPKHLKFGSKVASGSYGDLYRGTYCSQDVAIKVLKPERINSDMQKEFAQEV 340
+D +D WEI + G ++ SGS+G +Y+G + DVA+K+L + F EV
Sbjct: 2 SDSSDDWEIPDGQITVGQRIGSGSFGTVYKGKWHG-DVAVKMLNVTAPTPQQLQAFKNEV 60
Query: 341 FIMRKVRHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVS 400
++RK RH N++ F+G TKP L IVT++ G S+Y +LH ++ F++ L+ +A +
Sbjct: 61 GVLRKTRHVNILLFMGYSTKP-QLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTA 119
Query: 401 KGMNYLHQNNIIHRDLKAANLLMDENEVVKVADFGVARVKAQ-SGVMTAE--TGTYRWMA 457
+GM+YLH +IIHRDLK+ N+ + E+ VK+ DFG+A VK++ SG E +G+ WMA
Sbjct: 120 QGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMA 179
Query: 458 PEVI---EHKPYDHKADVFSFGIVLWELLTGKLPY 489
PEVI + PY ++DV++FGIVL+EL+TG+LPY
Sbjct: 180 PEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPY 214
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 177 bits (448), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 91/214 (42%), Positives = 139/214 (64%), Gaps = 8/214 (3%)
Query: 282 DGTDVWEIDPKHLKFGSKVASGSYGDLYRGTYCSQDVAIKVLKPERINSDMQKEFAQEVF 341
D +D WEI + G ++ SGS+G +Y+G + DVA+K+L + F EV
Sbjct: 26 DSSDDWEIPDGQITVGQRIGSGSFGTVYKGKWHG-DVAVKMLNVTAPTPQQLQAFKNEVG 84
Query: 342 IMRKVRHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSK 401
++RK RH N++ F+G TKP L IVT++ G S+Y +LH ++ F++ L+ +A ++
Sbjct: 85 VLRKTRHVNILLFMGYSTKP-QLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQ 143
Query: 402 GMNYLHQNNIIHRDLKAANLLMDENEVVKVADFGVARVKAQ-SGVMTAE--TGTYRWMAP 458
GM+YLH +IIHRDLK+ N+ + E+ VK+ DFG+A VK++ SG E +G+ WMAP
Sbjct: 144 GMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAP 203
Query: 459 EVI---EHKPYDHKADVFSFGIVLWELLTGKLPY 489
EVI + PY ++DV++FGIVL+EL+TG+LPY
Sbjct: 204 EVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPY 237
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 177 bits (448), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 91/215 (42%), Positives = 140/215 (65%), Gaps = 8/215 (3%)
Query: 281 NDGTDVWEIDPKHLKFGSKVASGSYGDLYRGTYCSQDVAIKVLKPERINSDMQKEFAQEV 340
+D +D WEI + G ++ SGS+G +Y+G + DVA+K+L + F EV
Sbjct: 2 SDSSDDWEIPDGQITVGQRIGSGSFGTVYKGKWHG-DVAVKMLNVTAPTPQQLQAFKNEV 60
Query: 341 FIMRKVRHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVS 400
++RK RH N++ F+G TKP L IVT++ G S+Y +LH ++ F++ L+ +A +
Sbjct: 61 GVLRKTRHVNILLFMGYSTKP-QLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTA 119
Query: 401 KGMNYLHQNNIIHRDLKAANLLMDENEVVKVADFGVARVKAQ-SGVMTAE--TGTYRWMA 457
+GM+YLH +IIHRDLK+ N+ + E+ VK+ DFG+A VK++ SG E +G+ WMA
Sbjct: 120 QGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMA 179
Query: 458 PEVI---EHKPYDHKADVFSFGIVLWELLTGKLPY 489
PEVI + PY ++DV++FGIVL+EL+TG+LPY
Sbjct: 180 PEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPY 214
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 176 bits (445), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 90/214 (42%), Positives = 137/214 (64%), Gaps = 8/214 (3%)
Query: 282 DGTDVWEIDPKHLKFGSKVASGSYGDLYRGTYCSQDVAIKVLKPERINSDMQKEFAQEVF 341
D +D WEI + G ++ SGS+G +Y+G + DVA+K+L + F EV
Sbjct: 14 DSSDDWEIPDGQITVGQRIGSGSFGTVYKGKWHG-DVAVKMLNVTAPTPQQLQAFKNEVG 72
Query: 342 IMRKVRHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSK 401
++RK RH N++ F+G TKP L IVT++ G S+Y +LH + F++ L+ +A ++
Sbjct: 73 VLRKTRHVNILLFMGYSTKP-QLAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTAR 131
Query: 402 GMNYLHQNNIIHRDLKAANLLMDENEVVKVADFGVARVKAQ-SGVMTAE--TGTYRWMAP 458
GM+YLH +IIHRDLK+ N+ + E+ VK+ DFG+A K++ SG E +G+ WMAP
Sbjct: 132 GMDYLHAKSIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAP 191
Query: 459 EVI---EHKPYDHKADVFSFGIVLWELLTGKLPY 489
EVI + PY ++DV++FGIVL+EL+TG+LPY
Sbjct: 192 EVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPY 225
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 175 bits (443), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 89/217 (41%), Positives = 142/217 (65%), Gaps = 8/217 (3%)
Query: 282 DGTDVWEIDPKHLKFGSKVASGSYGDLYRGTYCSQDVAIKVLKPERINSDMQKEFAQEVF 341
D + WEI+ + +++ SGS+G +Y+G + DVA+K+LK + + F EV
Sbjct: 26 DSSYYWEIEASEVMLSTRIGSGSFGTVYKGKWHG-DVAVKILKVVDPTPEQFQAFRNEVA 84
Query: 342 IMRKVRHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSK 401
++RK RH N++ F+G TK +L IVT++ G S+Y +LH + F++ L+ +A ++
Sbjct: 85 VLRKTRHVNILLFMGYMTKD-NLAIVTQWCEGSSLYKHLHVQETKFQMFQLIDIARQTAQ 143
Query: 402 GMNYLHQNNIIHRDLKAANLLMDENEVVKVADFGVARVKAQ-SGVMTAE--TGTYRWMAP 458
GM+YLH NIIHRD+K+ N+ + E VK+ DFG+A VK++ SG E TG+ WMAP
Sbjct: 144 GMDYLHAKNIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQQVEQPTGSVLWMAP 203
Query: 459 EVI---EHKPYDHKADVFSFGIVLWELLTGKLPYEYL 492
EVI ++ P+ ++DV+S+GIVL+EL+TG+LPY ++
Sbjct: 204 EVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHI 240
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 174 bits (442), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 90/212 (42%), Positives = 138/212 (65%), Gaps = 8/212 (3%)
Query: 284 TDVWEIDPKHLKFGSKVASGSYGDLYRGTYCSQDVAIKVLKPERINSDMQKEFAQEVFIM 343
+D WEI + G ++ SGS+G +Y+G + DVA+K+L + F EV ++
Sbjct: 2 SDDWEIPDGQITVGQRIGSGSFGTVYKGKWHG-DVAVKMLNVTAPTPQQLQAFKNEVGVL 60
Query: 344 RKVRHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGM 403
RK RH N++ F+G TKP L IVT++ G S+Y +LH ++ F++ L+ +A ++GM
Sbjct: 61 RKTRHVNILLFMGYSTKP-QLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGM 119
Query: 404 NYLHQNNIIHRDLKAANLLMDENEVVKVADFGVARVKAQ-SGVMTAE--TGTYRWMAPEV 460
+YLH +IIHRDLK+ N+ + E+ VK+ DFG+A VK++ SG E +G+ WMAPEV
Sbjct: 120 DYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEV 179
Query: 461 I---EHKPYDHKADVFSFGIVLWELLTGKLPY 489
I + PY ++DV++FGIVL+EL+TG+LPY
Sbjct: 180 IRMQDKNPYSFQSDVYAFGIVLYELMTGQLPY 211
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 174 bits (442), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 90/214 (42%), Positives = 138/214 (64%), Gaps = 8/214 (3%)
Query: 282 DGTDVWEIDPKHLKFGSKVASGSYGDLYRGTYCSQDVAIKVLKPERINSDMQKEFAQEVF 341
D +D WEI + G ++ SGS+G +Y+G + DVA+K+L + F EV
Sbjct: 26 DSSDDWEIPDGQITVGQRIGSGSFGTVYKGKWHG-DVAVKMLNVTAPTPQQLQAFKNEVG 84
Query: 342 IMRKVRHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSK 401
++RK RH N++ F+G TKP L IVT++ G S+Y +LH ++ F++ L+ +A ++
Sbjct: 85 VLRKTRHVNILLFMGYSTKP-QLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQ 143
Query: 402 GMNYLHQNNIIHRDLKAANLLMDENEVVKVADFGVARVKAQ-SGVMTAE--TGTYRWMAP 458
GM+YLH +IIHRDLK+ N+ + E+ VK+ DFG+A K++ SG E +G+ WMAP
Sbjct: 144 GMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAP 203
Query: 459 EVI---EHKPYDHKADVFSFGIVLWELLTGKLPY 489
EVI + PY ++DV++FGIVL+EL+TG+LPY
Sbjct: 204 EVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPY 237
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 174 bits (441), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 90/214 (42%), Positives = 138/214 (64%), Gaps = 8/214 (3%)
Query: 282 DGTDVWEIDPKHLKFGSKVASGSYGDLYRGTYCSQDVAIKVLKPERINSDMQKEFAQEVF 341
D +D WEI + G ++ SGS+G +Y+G + DVA+K+L + F EV
Sbjct: 18 DSSDDWEIPDGQITVGQRIGSGSFGTVYKGKWHG-DVAVKMLNVTAPTPQQLQAFKNEVG 76
Query: 342 IMRKVRHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSK 401
++RK RH N++ F+G TKP L IVT++ G S+Y +LH ++ F++ L+ +A ++
Sbjct: 77 VLRKTRHVNILLFMGYSTKP-QLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQ 135
Query: 402 GMNYLHQNNIIHRDLKAANLLMDENEVVKVADFGVARVKAQ-SGVMTAE--TGTYRWMAP 458
GM+YLH +IIHRDLK+ N+ + E+ VK+ DFG+A K++ SG E +G+ WMAP
Sbjct: 136 GMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAP 195
Query: 459 EVI---EHKPYDHKADVFSFGIVLWELLTGKLPY 489
EVI + PY ++DV++FGIVL+EL+TG+LPY
Sbjct: 196 EVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPY 229
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 174 bits (440), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 90/211 (42%), Positives = 137/211 (64%), Gaps = 8/211 (3%)
Query: 285 DVWEIDPKHLKFGSKVASGSYGDLYRGTYCSQDVAIKVLKPERINSDMQKEFAQEVFIMR 344
D WEI + G ++ SGS+G +Y+G + DVA+K+L + F EV ++R
Sbjct: 1 DDWEIPDGQITVGQRIGSGSFGTVYKGKWHG-DVAVKMLNVTAPTPQQLQAFKNEVGVLR 59
Query: 345 KVRHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMN 404
K RH N++ F+G TKP L IVT++ G S+Y +LH ++ F++ L+ +A ++GM+
Sbjct: 60 KTRHVNILLFMGYSTKP-QLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMD 118
Query: 405 YLHQNNIIHRDLKAANLLMDENEVVKVADFGVARVKAQ-SGVMTAE--TGTYRWMAPEVI 461
YLH +IIHRDLK+ N+ + E+ VK+ DFG+A VK++ SG E +G+ WMAPEVI
Sbjct: 119 YLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVI 178
Query: 462 ---EHKPYDHKADVFSFGIVLWELLTGKLPY 489
+ PY ++DV++FGIVL+EL+TG+LPY
Sbjct: 179 RMQDKNPYSFQSDVYAFGIVLYELMTGQLPY 209
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 173 bits (439), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 89/214 (41%), Positives = 135/214 (63%), Gaps = 8/214 (3%)
Query: 282 DGTDVWEIDPKHLKFGSKVASGSYGDLYRGTYCSQDVAIKVLKPERINSDMQKEFAQEVF 341
D D WEI + G ++ SGS+G +Y+G + DVA+K+L + F EV
Sbjct: 14 DAADDWEIPDGQITVGQRIGSGSFGTVYKGKWHG-DVAVKMLNVTAPTPQQLQAFKNEVG 72
Query: 342 IMRKVRHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSK 401
++RK RH N++ F+G T P L IVT++ G S+Y +LH + F++ L+ +A ++
Sbjct: 73 VLRKTRHVNILLFMGYST-APQLAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTAR 131
Query: 402 GMNYLHQNNIIHRDLKAANLLMDENEVVKVADFGVARVKAQ-SGVMTAE--TGTYRWMAP 458
GM+YLH +IIHRDLK+ N+ + E+ VK+ DFG+A K++ SG E +G+ WMAP
Sbjct: 132 GMDYLHAKSIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAP 191
Query: 459 EVI---EHKPYDHKADVFSFGIVLWELLTGKLPY 489
EVI + PY ++DV++FGIVL+EL+TG+LPY
Sbjct: 192 EVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPY 225
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 172 bits (435), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 89/211 (42%), Positives = 136/211 (64%), Gaps = 8/211 (3%)
Query: 285 DVWEIDPKHLKFGSKVASGSYGDLYRGTYCSQDVAIKVLKPERINSDMQKEFAQEVFIMR 344
D WEI + G ++ SGS+G +Y+G + DVA+K+L + F EV ++R
Sbjct: 1 DDWEIPDGQITVGQRIGSGSFGTVYKGKWHG-DVAVKMLNVTAPTPQQLQAFKNEVGVLR 59
Query: 345 KVRHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMN 404
K RH N++ F+G T P L IVT++ G S+Y +LH ++ F++ L+ +A ++GM+
Sbjct: 60 KTRHVNILLFMGYST-APQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMD 118
Query: 405 YLHQNNIIHRDLKAANLLMDENEVVKVADFGVARVKAQ-SGVMTAE--TGTYRWMAPEVI 461
YLH +IIHRDLK+ N+ + E+ VK+ DFG+A VK++ SG E +G+ WMAPEVI
Sbjct: 119 YLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVI 178
Query: 462 ---EHKPYDHKADVFSFGIVLWELLTGKLPY 489
+ PY ++DV++FGIVL+EL+TG+LPY
Sbjct: 179 RMQDKNPYSFQSDVYAFGIVLYELMTGQLPY 209
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 171 bits (433), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 89/211 (42%), Positives = 136/211 (64%), Gaps = 8/211 (3%)
Query: 285 DVWEIDPKHLKFGSKVASGSYGDLYRGTYCSQDVAIKVLKPERINSDMQKEFAQEVFIMR 344
D WEI + G ++ SGS+G +Y+G + DVA+K+L + F EV ++R
Sbjct: 1 DDWEIPDGQITVGQRIGSGSFGTVYKGKWHG-DVAVKMLNVTAPTPQQLQAFKNEVGVLR 59
Query: 345 KVRHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMN 404
K RH N++ F+G TKP L IVT++ G S+Y +LH ++ F++ L+ +A ++GM+
Sbjct: 60 KTRHVNILLFMGYSTKP-QLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMD 118
Query: 405 YLHQNNIIHRDLKAANLLMDENEVVKVADFGVARVKAQ-SGVMTAE--TGTYRWMAPEVI 461
YLH +IIHRDLK+ N+ + E+ VK+ DFG+A K++ SG E +G+ WMAPEVI
Sbjct: 119 YLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVI 178
Query: 462 ---EHKPYDHKADVFSFGIVLWELLTGKLPY 489
+ PY ++DV++FGIVL+EL+TG+LPY
Sbjct: 179 RMQDKNPYSFQSDVYAFGIVLYELMTGQLPY 209
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 167 bits (422), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 83/209 (39%), Positives = 130/209 (62%), Gaps = 9/209 (4%)
Query: 287 WEIDPKHLKFGSKVASGSYGDLYRGTYCSQD-VAIKVLKPERINSDMQKEFAQEVFIMRK 345
W IDP L F ++ SG +G ++ G + ++D VAIK ++ ++ +++F +E +M K
Sbjct: 3 WVIDPSELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMS---EEDFIEEAEVMMK 59
Query: 346 VRHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNY 405
+ H +VQ G C + +C+VTEFM G + DYL +G+F +LL + +DV +GM Y
Sbjct: 60 LSHPKLVQLYGVCLEQAPICLVTEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAY 119
Query: 406 LHQNNIIHRDLKAANLLMDENEVVKVADFGVARVKAQSGVMTAETGT---YRWMAPEVIE 462
L + +IHRDL A N L+ EN+V+KV+DFG+ R T+ TGT +W +PEV
Sbjct: 120 LEEACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQ-YTSSTGTKFPVKWASPEVFS 178
Query: 463 HKPYDHKADVFSFGIVLWELLT-GKLPYE 490
Y K+DV+SFG+++WE+ + GK+PYE
Sbjct: 179 FSRYSSKSDVWSFGVLMWEVFSEGKIPYE 207
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 166 bits (419), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 83/213 (38%), Positives = 131/213 (61%), Gaps = 9/213 (4%)
Query: 283 GTDVWEIDPKHLKFGSKVASGSYGDLYRGTYCSQD-VAIKVLKPERINSDMQKEFAQEVF 341
G+ W IDP L F ++ SG +G ++ G + ++D VAIK ++ ++ +++F +E
Sbjct: 1 GSGKWVIDPSELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMS---EEDFIEEAE 57
Query: 342 IMRKVRHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSK 401
+M K+ H +VQ G C + +C+V EFM G + DYL +G+F +LL + +DV +
Sbjct: 58 VMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCE 117
Query: 402 GMNYLHQNNIIHRDLKAANLLMDENEVVKVADFGVARVKAQSGVMTAETGT---YRWMAP 458
GM YL + +IHRDL A N L+ EN+V+KV+DFG+ R T+ TGT +W +P
Sbjct: 118 GMAYLEEACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQ-YTSSTGTKFPVKWASP 176
Query: 459 EVIEHKPYDHKADVFSFGIVLWELLT-GKLPYE 490
EV Y K+DV+SFG+++WE+ + GK+PYE
Sbjct: 177 EVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYE 209
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 163 bits (413), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 83/207 (40%), Positives = 127/207 (61%), Gaps = 9/207 (4%)
Query: 289 IDPKHLKFGSKVASGSYGDLYRGTYCSQD-VAIKVLKPERINSDMQKEFAQEVFIMRKVR 347
IDP L F ++ SG +G ++ G + ++D VAIK +K ++ D +F +E +M K+
Sbjct: 24 IDPSELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIKEGSMSED---DFIEEAEVMMKLS 80
Query: 348 HKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLH 407
H +VQ G C + +C+V EFM G + DYL +G+F +LL + +DV +GM YL
Sbjct: 81 HPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLE 140
Query: 408 QNNIIHRDLKAANLLMDENEVVKVADFGVARVKAQSGVMTAETGT---YRWMAPEVIEHK 464
+ +IHRDL A N L+ EN+V+KV+DFG+ R T+ TGT +W +PEV
Sbjct: 141 EACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQ-YTSSTGTKFPVKWASPEVFSFS 199
Query: 465 PYDHKADVFSFGIVLWELLT-GKLPYE 490
Y K+DV+SFG+++WE+ + GK+PYE
Sbjct: 200 RYSSKSDVWSFGVLMWEVFSEGKIPYE 226
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 162 bits (410), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 81/207 (39%), Positives = 129/207 (62%), Gaps = 9/207 (4%)
Query: 289 IDPKHLKFGSKVASGSYGDLYRGTYCSQD-VAIKVLKPERINSDMQKEFAQEVFIMRKVR 347
IDP L F ++ SG +G ++ G + ++D VAIK ++ ++ +++F +E +M K+
Sbjct: 4 IDPSELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMS---EEDFIEEAEVMMKLS 60
Query: 348 HKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLH 407
H +VQ G C + +C+V EFM G + DYL +G+F +LL + +DV +GM YL
Sbjct: 61 HPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLE 120
Query: 408 QNNIIHRDLKAANLLMDENEVVKVADFGVARVKAQSGVMTAETGT---YRWMAPEVIEHK 464
+ ++IHRDL A N L+ EN+V+KV+DFG+ R T+ TGT +W +PEV
Sbjct: 121 EASVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQ-YTSSTGTKFPVKWASPEVFSFS 179
Query: 465 PYDHKADVFSFGIVLWELLT-GKLPYE 490
Y K+DV+SFG+++WE+ + GK+PYE
Sbjct: 180 RYSSKSDVWSFGVLMWEVFSEGKIPYE 206
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 161 bits (407), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 81/207 (39%), Positives = 128/207 (61%), Gaps = 9/207 (4%)
Query: 289 IDPKHLKFGSKVASGSYGDLYRGTYCSQD-VAIKVLKPERINSDMQKEFAQEVFIMRKVR 347
IDP L F ++ SG +G ++ G + ++D VAIK ++ ++ +++F +E +M K+
Sbjct: 4 IDPSELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMS---EEDFIEEAEVMMKLS 60
Query: 348 HKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLH 407
H +VQ G C + +C+V EFM G + DYL +G+F +LL + +DV +GM YL
Sbjct: 61 HPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLE 120
Query: 408 QNNIIHRDLKAANLLMDENEVVKVADFGVARVKAQSGVMTAETGT---YRWMAPEVIEHK 464
+ +IHRDL A N L+ EN+V+KV+DFG+ R T+ TGT +W +PEV
Sbjct: 121 EACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQ-YTSSTGTKFPVKWASPEVFSFS 179
Query: 465 PYDHKADVFSFGIVLWELLT-GKLPYE 490
Y K+DV+SFG+++WE+ + GK+PYE
Sbjct: 180 RYSSKSDVWSFGVLMWEVFSEGKIPYE 206
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 161 bits (407), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 81/207 (39%), Positives = 128/207 (61%), Gaps = 9/207 (4%)
Query: 289 IDPKHLKFGSKVASGSYGDLYRGTYCSQD-VAIKVLKPERINSDMQKEFAQEVFIMRKVR 347
IDP L F ++ SG +G ++ G + ++D VAIK ++ ++ +++F +E +M K+
Sbjct: 2 IDPSELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMS---EEDFIEEAEVMMKLS 58
Query: 348 HKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLH 407
H +VQ G C + +C+V EFM G + DYL +G+F +LL + +DV +GM YL
Sbjct: 59 HPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLE 118
Query: 408 QNNIIHRDLKAANLLMDENEVVKVADFGVARVKAQSGVMTAETGT---YRWMAPEVIEHK 464
+ +IHRDL A N L+ EN+V+KV+DFG+ R T+ TGT +W +PEV
Sbjct: 119 EACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQ-YTSSTGTKFPVKWASPEVFSFS 177
Query: 465 PYDHKADVFSFGIVLWELLT-GKLPYE 490
Y K+DV+SFG+++WE+ + GK+PYE
Sbjct: 178 RYSSKSDVWSFGVLMWEVFSEGKIPYE 204
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 157 bits (398), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 80/225 (35%), Positives = 133/225 (59%), Gaps = 7/225 (3%)
Query: 283 GTDVWEIDPKHLKFGSKVASGSYGDLYRGTYCSQ-DVAIKVLKPERINSDMQKEFAQEVF 341
G WEIDPK L F ++ +G +G + G + Q DVAIK++K ++ D EF +E
Sbjct: 15 GYGSWEIDPKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSED---EFIEEAK 71
Query: 342 IMRKVRHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSK 401
+M + H+ +VQ G CTK + I+TE+M+ G + +YL +++ F+ LL++ DV +
Sbjct: 72 VMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCE 131
Query: 402 GMNYLHQNNIIHRDLKAANLLMDENEVVKVADFGVARVKAQSGVMTAETGTY--RWMAPE 459
M YL +HRDL A N L+++ VVKV+DFG++R ++ + RW PE
Sbjct: 132 AMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPE 191
Query: 460 VIEHKPYDHKADVFSFGIVLWELLT-GKLPYEYLTPLQAAVGVVQ 503
V+ + + K+D+++FG+++WE+ + GK+PYE T + A + Q
Sbjct: 192 VLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQ 236
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 157 bits (398), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 79/221 (35%), Positives = 132/221 (59%), Gaps = 7/221 (3%)
Query: 287 WEIDPKHLKFGSKVASGSYGDLYRGTYCSQ-DVAIKVLKPERINSDMQKEFAQEVFIMRK 345
WEIDPK L F ++ +G +G + G + Q DVAIK++K ++ D EF +E +M
Sbjct: 4 WEIDPKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSED---EFIEEAKVMMN 60
Query: 346 VRHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNY 405
+ H+ +VQ G CTK + I+TE+M+ G + +YL +++ F+ LL++ DV + M Y
Sbjct: 61 LSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEY 120
Query: 406 LHQNNIIHRDLKAANLLMDENEVVKVADFGVARVKAQSGVMTAETGTY--RWMAPEVIEH 463
L +HRDL A N L+++ VVKV+DFG++R ++ + RW PEV+ +
Sbjct: 121 LESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSRGSKFPVRWSPPEVLMY 180
Query: 464 KPYDHKADVFSFGIVLWELLT-GKLPYEYLTPLQAAVGVVQ 503
+ K+D+++FG+++WE+ + GK+PYE T + A + Q
Sbjct: 181 SKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQ 221
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 157 bits (398), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 80/225 (35%), Positives = 133/225 (59%), Gaps = 7/225 (3%)
Query: 283 GTDVWEIDPKHLKFGSKVASGSYGDLYRGTYCSQ-DVAIKVLKPERINSDMQKEFAQEVF 341
G WEIDPK L F ++ +G +G + G + Q DVAIK++K ++ D EF +E
Sbjct: 6 GYGSWEIDPKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSED---EFIEEAK 62
Query: 342 IMRKVRHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSK 401
+M + H+ +VQ G CTK + I+TE+M+ G + +YL +++ F+ LL++ DV +
Sbjct: 63 VMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCE 122
Query: 402 GMNYLHQNNIIHRDLKAANLLMDENEVVKVADFGVARVKAQSGVMTAETGTY--RWMAPE 459
M YL +HRDL A N L+++ VVKV+DFG++R ++ + RW PE
Sbjct: 123 AMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPE 182
Query: 460 VIEHKPYDHKADVFSFGIVLWELLT-GKLPYEYLTPLQAAVGVVQ 503
V+ + + K+D+++FG+++WE+ + GK+PYE T + A + Q
Sbjct: 183 VLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQ 227
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 157 bits (397), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 79/221 (35%), Positives = 132/221 (59%), Gaps = 7/221 (3%)
Query: 287 WEIDPKHLKFGSKVASGSYGDLYRGTYCSQ-DVAIKVLKPERINSDMQKEFAQEVFIMRK 345
WEIDPK L F ++ +G +G + G + Q DVAIK++K ++ D EF +E +M
Sbjct: 3 WEIDPKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSED---EFIEEAKVMMN 59
Query: 346 VRHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNY 405
+ H+ +VQ G CTK + I+TE+M+ G + +YL +++ F+ LL++ DV + M Y
Sbjct: 60 LSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEY 119
Query: 406 LHQNNIIHRDLKAANLLMDENEVVKVADFGVARVKAQSGVMTAETGTY--RWMAPEVIEH 463
L +HRDL A N L+++ VVKV+DFG++R ++ + RW PEV+ +
Sbjct: 120 LESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMY 179
Query: 464 KPYDHKADVFSFGIVLWELLT-GKLPYEYLTPLQAAVGVVQ 503
+ K+D+++FG+++WE+ + GK+PYE T + A + Q
Sbjct: 180 SKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQ 220
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 157 bits (397), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 80/225 (35%), Positives = 133/225 (59%), Gaps = 7/225 (3%)
Query: 283 GTDVWEIDPKHLKFGSKVASGSYGDLYRGTYCSQ-DVAIKVLKPERINSDMQKEFAQEVF 341
G WEIDPK L F ++ +G +G + G + Q DVAIK++K ++ D EF +E
Sbjct: 15 GYGSWEIDPKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSED---EFIEEAK 71
Query: 342 IMRKVRHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSK 401
+M + H+ +VQ G CTK + I+TE+M+ G + +YL +++ F+ LL++ DV +
Sbjct: 72 VMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCE 131
Query: 402 GMNYLHQNNIIHRDLKAANLLMDENEVVKVADFGVARVKAQSGVMTAETGTY--RWMAPE 459
M YL +HRDL A N L+++ VVKV+DFG++R ++ + RW PE
Sbjct: 132 AMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEETSSVGSKFPVRWSPPE 191
Query: 460 VIEHKPYDHKADVFSFGIVLWELLT-GKLPYEYLTPLQAAVGVVQ 503
V+ + + K+D+++FG+++WE+ + GK+PYE T + A + Q
Sbjct: 192 VLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQ 236
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 157 bits (396), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 79/221 (35%), Positives = 132/221 (59%), Gaps = 7/221 (3%)
Query: 287 WEIDPKHLKFGSKVASGSYGDLYRGTYCSQ-DVAIKVLKPERINSDMQKEFAQEVFIMRK 345
WEIDPK L F ++ +G +G + G + Q DVAIK++K ++ D EF +E +M
Sbjct: 4 WEIDPKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSED---EFIEEAKVMMN 60
Query: 346 VRHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNY 405
+ H+ +VQ G CTK + I+TE+M+ G + +YL +++ F+ LL++ DV + M Y
Sbjct: 61 LSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEY 120
Query: 406 LHQNNIIHRDLKAANLLMDENEVVKVADFGVARVKAQSGVMTAETGTY--RWMAPEVIEH 463
L +HRDL A N L+++ VVKV+DFG++R ++ + RW PEV+ +
Sbjct: 121 LESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMY 180
Query: 464 KPYDHKADVFSFGIVLWELLT-GKLPYEYLTPLQAAVGVVQ 503
+ K+D+++FG+++WE+ + GK+PYE T + A + Q
Sbjct: 181 SKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQ 221
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 156 bits (394), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 93/243 (38%), Positives = 144/243 (59%), Gaps = 25/243 (10%)
Query: 255 SHRSSS--PTSEPEDTGMKSHPYHLKIPNDGTDVWEIDPKHLKFGSKVASGSYGDLYRGT 312
HR ++ PTS+P+ G+ D WEI + L+ K+ G +G+++ GT
Sbjct: 157 CHRLTTVCPTSKPQTQGL------------AKDAWEIPRESLRLEVKLGQGCFGEVWMGT 204
Query: 313 Y-CSQDVAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQFIGACTKPPSLCIVTEFM 371
+ + VAIK LKP ++ + F QE +M+K+RH+ +VQ ++ P + IVTE+M
Sbjct: 205 WNGTTRVAIKTLKPGTMSPEA---FLQEAQVMKKLRHEKLVQLYAVVSEEP-IYIVTEYM 260
Query: 372 SGGSVYDYLHKLKGVF-KLPSLLKVAIDVSKGMNYLHQNNIIHRDLKAANLLMDENEVVK 430
S GS+ D+L G + +LP L+ +A ++ GM Y+ + N +HRDL+AAN+L+ EN V K
Sbjct: 261 SKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCK 320
Query: 431 VADFGVARVKAQSGVMTAETGT---YRWMAPEVIEHKPYDHKADVFSFGIVLWELLT-GK 486
VADFG+AR+ + TA G +W APE + + K+DV+SFGI+L EL T G+
Sbjct: 321 VADFGLARL-IEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGR 379
Query: 487 LPY 489
+PY
Sbjct: 380 VPY 382
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 156 bits (394), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 93/243 (38%), Positives = 144/243 (59%), Gaps = 25/243 (10%)
Query: 255 SHRSSS--PTSEPEDTGMKSHPYHLKIPNDGTDVWEIDPKHLKFGSKVASGSYGDLYRGT 312
HR ++ PTS+P+ G+ D WEI + L+ K+ G +G+++ GT
Sbjct: 157 CHRLTTVCPTSKPQTQGL------------AKDAWEIPRESLRLEVKLGQGCFGEVWMGT 204
Query: 313 Y-CSQDVAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQFIGACTKPPSLCIVTEFM 371
+ + VAIK LKP ++ + F QE +M+K+RH+ +VQ ++ P + IVTE+M
Sbjct: 205 WNGTTRVAIKTLKPGTMSPEA---FLQEAQVMKKLRHEKLVQLYAVVSEEP-IYIVTEYM 260
Query: 372 SGGSVYDYLHKLKGVF-KLPSLLKVAIDVSKGMNYLHQNNIIHRDLKAANLLMDENEVVK 430
S GS+ D+L G + +LP L+ +A ++ GM Y+ + N +HRDL+AAN+L+ EN V K
Sbjct: 261 SKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCK 320
Query: 431 VADFGVARVKAQSGVMTAETGT---YRWMAPEVIEHKPYDHKADVFSFGIVLWELLT-GK 486
VADFG+AR+ + TA G +W APE + + K+DV+SFGI+L EL T G+
Sbjct: 321 VADFGLARL-IEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGR 379
Query: 487 LPY 489
+PY
Sbjct: 380 VPY 382
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 155 bits (393), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 93/242 (38%), Positives = 144/242 (59%), Gaps = 25/242 (10%)
Query: 256 HRSSS--PTSEPEDTGMKSHPYHLKIPNDGTDVWEIDPKHLKFGSKVASGSYGDLYRGTY 313
HR ++ PTS+P+ G+ D WEI + L+ K+ G +G+++ GT+
Sbjct: 241 HRLTTVCPTSKPQTQGL------------AKDAWEIPRESLRLEVKLGQGCFGEVWMGTW 288
Query: 314 -CSQDVAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQFIGACTKPPSLCIVTEFMS 372
+ VAIK LKP ++ + F QE +M+K+RH+ +VQ ++ P + IVTE+MS
Sbjct: 289 NGTTRVAIKTLKPGTMSPEA---FLQEAQVMKKLRHEKLVQLYAVVSEEP-IYIVTEYMS 344
Query: 373 GGSVYDYLHKLKGVF-KLPSLLKVAIDVSKGMNYLHQNNIIHRDLKAANLLMDENEVVKV 431
GS+ D+L G + +LP L+ +A ++ GM Y+ + N +HRDL+AAN+L+ EN V KV
Sbjct: 345 KGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKV 404
Query: 432 ADFGVARVKAQSGVMTAETGT---YRWMAPEVIEHKPYDHKADVFSFGIVLWELLT-GKL 487
ADFG+AR+ + TA G +W APE + + K+DV+SFGI+L EL T G++
Sbjct: 405 ADFGLARL-IEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRV 463
Query: 488 PY 489
PY
Sbjct: 464 PY 465
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 155 bits (391), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 83/219 (37%), Positives = 128/219 (58%), Gaps = 11/219 (5%)
Query: 285 DVWEIDPKHLKFGSKVASGSYGDLYRGTY--CSQDVAIKVLKPERINSDMQKEFAQEVFI 342
D WE++ + K+ G YG++Y G + S VA+K LK + + + EF +E +
Sbjct: 4 DKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE---EFLKEAAV 60
Query: 343 MRKVRHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKL-KGVFKLPSLLKVAIDVSK 401
M++++H N+VQ +G CT+ P I+TEFM+ G++ DYL + + LL +A +S
Sbjct: 61 MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISS 120
Query: 402 GMNYLHQNNIIHRDLKAANLLMDENEVVKVADFGVARVKAQSGVMTAETGT---YRWMAP 458
M YL + N IHRDL A N L+ EN +VKVADFG++R+ TA G +W AP
Sbjct: 121 AMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMT-GDTFTAHAGAKFPIKWTAP 179
Query: 459 EVIEHKPYDHKADVFSFGIVLWELLT-GKLPYEYLTPLQ 496
E + + + K+DV++FG++LWE+ T G PY + P Q
Sbjct: 180 ESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDPSQ 218
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 154 bits (389), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 87/220 (39%), Positives = 135/220 (61%), Gaps = 11/220 (5%)
Query: 276 HLKIPNDGTDVWEIDPKHLKFGSKVASGSYGDLYRGTY-CSQDVAIKVLKPERINSDMQK 334
H++ D WEI + L+ K+ G +G+++ GT+ + VAIK LKP ++ +
Sbjct: 2 HMQTQGLAKDAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPE--- 58
Query: 335 EFAQEVFIMRKVRHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVF-KLPSLL 393
F QE +M+K+RH+ +VQ ++ P + IVTE+MS GS+ D+L G + +LP L+
Sbjct: 59 AFLQEAQVMKKIRHEKLVQLYAVVSEEP-IYIVTEYMSKGSLLDFLKGEMGKYLRLPQLV 117
Query: 394 KVAIDVSKGMNYLHQNNIIHRDLKAANLLMDENEVVKVADFGVARVKAQSGVMTAETGT- 452
+A ++ GM Y+ + N +HRDL+AAN+L+ EN V KVADFG+AR+ + TA G
Sbjct: 118 DMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARL-IEDNEYTARQGAK 176
Query: 453 --YRWMAPEVIEHKPYDHKADVFSFGIVLWELLT-GKLPY 489
+W APE + + K+DV+SFGI+L EL T G++PY
Sbjct: 177 FPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPY 216
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 154 bits (388), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 82/217 (37%), Positives = 127/217 (58%), Gaps = 11/217 (5%)
Query: 280 PNDGTDVWEIDPKHLKFGSKVASGSYGDLYRGTY--CSQDVAIKVLKPERINSDMQKEFA 337
P+ D WE++ + K+ G YG++Y G + S VA+K LK + + + EF
Sbjct: 5 PSPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE---EFL 61
Query: 338 QEVFIMRKVRHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKL-KGVFKLPSLLKVA 396
+E +M++++H N+VQ +G CT+ P I+TEFM+ G++ DYL + + LL +A
Sbjct: 62 KEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMA 121
Query: 397 IDVSKGMNYLHQNNIIHRDLKAANLLMDENEVVKVADFGVARVKAQSGVMTAETGT---Y 453
+S M YL + N IHRDL A N L+ EN +VKVADFG++R+ TA G
Sbjct: 122 TQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMT-GDTYTAHAGAKFPI 180
Query: 454 RWMAPEVIEHKPYDHKADVFSFGIVLWELLT-GKLPY 489
+W APE + + + K+DV++FG++LWE+ T G PY
Sbjct: 181 KWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPY 217
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 154 bits (388), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 90/236 (38%), Positives = 139/236 (58%), Gaps = 23/236 (9%)
Query: 260 SPTSEPEDTGMKSHPYHLKIPNDGTDVWEIDPKHLKFGSKVASGSYGDLYRGTY-CSQDV 318
PTS+P+ G+ D WEI + L+ K+ G +G+++ GT+ + V
Sbjct: 165 CPTSKPQTQGL------------AKDAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRV 212
Query: 319 AIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQFIGACTKPPSLCIVTEFMSGGSVYD 378
AIK LKP ++ + F QE +M+K+RH+ +VQ ++ P + IVTE+MS GS+ D
Sbjct: 213 AIKTLKPGNMSPEA---FLQEAQVMKKLRHEKLVQLYAVVSEEP-IYIVTEYMSKGSLLD 268
Query: 379 YLHKLKGVF-KLPSLLKVAIDVSKGMNYLHQNNIIHRDLKAANLLMDENEVVKVADFGVA 437
+L G + +LP L+ +A ++ GM Y+ + N +HRDL+AAN+L+ EN V KVADFG+
Sbjct: 269 FLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLG 328
Query: 438 RVKAQSGVMTAETGT---YRWMAPEVIEHKPYDHKADVFSFGIVLWELLT-GKLPY 489
R+ + TA G +W APE + + K+DV+SFGI+L EL T G++PY
Sbjct: 329 RL-IEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPY 383
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 154 bits (388), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 92/243 (37%), Positives = 143/243 (58%), Gaps = 25/243 (10%)
Query: 255 SHRSSS--PTSEPEDTGMKSHPYHLKIPNDGTDVWEIDPKHLKFGSKVASGSYGDLYRGT 312
HR ++ PTS+P+ G+ D WEI + L+ K+ G +G+++ GT
Sbjct: 157 CHRLTTVCPTSKPQTQGL------------AKDAWEIPRESLRLEVKLGQGCFGEVWMGT 204
Query: 313 Y-CSQDVAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQFIGACTKPPSLCIVTEFM 371
+ + VAIK LKP ++ + F QE +M+K+RH+ +VQ ++ P + IV E+M
Sbjct: 205 WNGTTRVAIKTLKPGTMSPEA---FLQEAQVMKKLRHEKLVQLYAVVSEEP-IYIVGEYM 260
Query: 372 SGGSVYDYLHKLKGVF-KLPSLLKVAIDVSKGMNYLHQNNIIHRDLKAANLLMDENEVVK 430
S GS+ D+L G + +LP L+ +A ++ GM Y+ + N +HRDL+AAN+L+ EN V K
Sbjct: 261 SKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCK 320
Query: 431 VADFGVARVKAQSGVMTAETGT---YRWMAPEVIEHKPYDHKADVFSFGIVLWELLT-GK 486
VADFG+AR+ + TA G +W APE + + K+DV+SFGI+L EL T G+
Sbjct: 321 VADFGLARL-IEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGR 379
Query: 487 LPY 489
+PY
Sbjct: 380 VPY 382
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 153 bits (387), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 87/220 (39%), Positives = 135/220 (61%), Gaps = 11/220 (5%)
Query: 276 HLKIPNDGTDVWEIDPKHLKFGSKVASGSYGDLYRGTY-CSQDVAIKVLKPERINSDMQK 334
H++ D WEI + L+ K+ G +G+++ GT+ + VAIK LKP ++ +
Sbjct: 2 HMQTQGLAKDAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPE--- 58
Query: 335 EFAQEVFIMRKVRHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVF-KLPSLL 393
F QE +M+K+RH+ +VQ ++ P + IVTE+MS GS+ D+L G + +LP L+
Sbjct: 59 AFLQEAQVMKKLRHEKLVQLYAVVSEEP-IYIVTEYMSKGSLLDFLKGEMGKYLRLPQLV 117
Query: 394 KVAIDVSKGMNYLHQNNIIHRDLKAANLLMDENEVVKVADFGVARVKAQSGVMTAETGT- 452
+A ++ GM Y+ + N +HRDL+AAN+L+ EN V KVADFG+AR+ + TA G
Sbjct: 118 DMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARL-IEDNEYTARQGAK 176
Query: 453 --YRWMAPEVIEHKPYDHKADVFSFGIVLWELLT-GKLPY 489
+W APE + + K+DV+SFGI+L EL T G++PY
Sbjct: 177 FPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPY 216
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 153 bits (386), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 82/219 (37%), Positives = 128/219 (58%), Gaps = 11/219 (5%)
Query: 285 DVWEIDPKHLKFGSKVASGSYGDLYRGTY--CSQDVAIKVLKPERINSDMQKEFAQEVFI 342
D WE++ + K+ G +G++Y G + S VA+K LK + + + EF +E +
Sbjct: 4 DKWEMERTDITMKHKLGGGQFGEVYEGVWKKYSLTVAVKTLKEDTMEVE---EFLKEAAV 60
Query: 343 MRKVRHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKL-KGVFKLPSLLKVAIDVSK 401
M++++H N+VQ +G CT+ P I+TEFM+ G++ DYL + + LL +A +S
Sbjct: 61 MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISS 120
Query: 402 GMNYLHQNNIIHRDLKAANLLMDENEVVKVADFGVARVKAQSGVMTAETGT---YRWMAP 458
M YL + N IHRDL A N L+ EN +VKVADFG++R+ TA G +W AP
Sbjct: 121 AMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMT-GDTXTAHAGAKFPIKWTAP 179
Query: 459 EVIEHKPYDHKADVFSFGIVLWELLT-GKLPYEYLTPLQ 496
E + + + K+DV++FG++LWE+ T G PY + P Q
Sbjct: 180 ESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDPSQ 218
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 152 bits (385), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 81/212 (38%), Positives = 125/212 (58%), Gaps = 11/212 (5%)
Query: 285 DVWEIDPKHLKFGSKVASGSYGDLYRGTY--CSQDVAIKVLKPERINSDMQKEFAQEVFI 342
D WE++ + K+ G YG++Y G + S VA+K LK + + + EF +E +
Sbjct: 19 DKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE---EFLKEAAV 75
Query: 343 MRKVRHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKL-KGVFKLPSLLKVAIDVSK 401
M++++H N+VQ +G CT+ P I+TEFM+ G++ DYL + + LL +A +S
Sbjct: 76 MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISS 135
Query: 402 GMNYLHQNNIIHRDLKAANLLMDENEVVKVADFGVARVKAQSGVMTAETGT---YRWMAP 458
M YL + N IHRDL A N L+ EN +VKVADFG++R+ TA G +W AP
Sbjct: 136 AMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMT-GDTYTAHAGAKFPIKWTAP 194
Query: 459 EVIEHKPYDHKADVFSFGIVLWELLT-GKLPY 489
E + + + K+DV++FG++LWE+ T G PY
Sbjct: 195 ESLAYNKFSIKSDVWAFGVLLWEIATYGMSPY 226
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 152 bits (385), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 81/212 (38%), Positives = 125/212 (58%), Gaps = 11/212 (5%)
Query: 285 DVWEIDPKHLKFGSKVASGSYGDLYRGTY--CSQDVAIKVLKPERINSDMQKEFAQEVFI 342
D WE++ + K+ G YG++Y G + S VA+K LK + + + EF +E +
Sbjct: 6 DKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE---EFLKEAAV 62
Query: 343 MRKVRHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKL-KGVFKLPSLLKVAIDVSK 401
M++++H N+VQ +G CT+ P I+TEFM+ G++ DYL + + LL +A +S
Sbjct: 63 MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISS 122
Query: 402 GMNYLHQNNIIHRDLKAANLLMDENEVVKVADFGVARVKAQSGVMTAETGT---YRWMAP 458
M YL + N IHRDL A N L+ EN +VKVADFG++R+ TA G +W AP
Sbjct: 123 AMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMT-GDTYTAHAGAKFPIKWTAP 181
Query: 459 EVIEHKPYDHKADVFSFGIVLWELLT-GKLPY 489
E + + + K+DV++FG++LWE+ T G PY
Sbjct: 182 ESLAYNKFSIKSDVWAFGVLLWEIATYGMSPY 213
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 152 bits (385), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 81/212 (38%), Positives = 125/212 (58%), Gaps = 11/212 (5%)
Query: 285 DVWEIDPKHLKFGSKVASGSYGDLYRGTY--CSQDVAIKVLKPERINSDMQKEFAQEVFI 342
D WE++ + K+ G YG++Y G + S VA+K LK + + + EF +E +
Sbjct: 11 DKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE---EFLKEAAV 67
Query: 343 MRKVRHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKL-KGVFKLPSLLKVAIDVSK 401
M++++H N+VQ +G CT+ P I+TEFM+ G++ DYL + + LL +A +S
Sbjct: 68 MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISS 127
Query: 402 GMNYLHQNNIIHRDLKAANLLMDENEVVKVADFGVARVKAQSGVMTAETGT---YRWMAP 458
M YL + N IHRDL A N L+ EN +VKVADFG++R+ TA G +W AP
Sbjct: 128 AMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMT-GDTYTAHAGAKFPIKWTAP 186
Query: 459 EVIEHKPYDHKADVFSFGIVLWELLT-GKLPY 489
E + + + K+DV++FG++LWE+ T G PY
Sbjct: 187 ESLAYNKFSIKSDVWAFGVLLWEIATYGMSPY 218
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 152 bits (384), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 81/212 (38%), Positives = 125/212 (58%), Gaps = 11/212 (5%)
Query: 285 DVWEIDPKHLKFGSKVASGSYGDLYRGTY--CSQDVAIKVLKPERINSDMQKEFAQEVFI 342
D WE++ + K+ G YG++Y G + S VA+K LK + + + EF +E +
Sbjct: 6 DKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE---EFLKEAAV 62
Query: 343 MRKVRHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKL-KGVFKLPSLLKVAIDVSK 401
M++++H N+VQ +G CT+ P I+TEFM+ G++ DYL + + LL +A +S
Sbjct: 63 MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISS 122
Query: 402 GMNYLHQNNIIHRDLKAANLLMDENEVVKVADFGVARVKAQSGVMTAETGT---YRWMAP 458
M YL + N IHRDL A N L+ EN +VKVADFG++R+ TA G +W AP
Sbjct: 123 AMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMT-GDTYTAHAGAKFPIKWTAP 181
Query: 459 EVIEHKPYDHKADVFSFGIVLWELLT-GKLPY 489
E + + + K+DV++FG++LWE+ T G PY
Sbjct: 182 ESLAYNKFSIKSDVWAFGVLLWEIATYGMSPY 213
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 152 bits (384), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 87/220 (39%), Positives = 134/220 (60%), Gaps = 11/220 (5%)
Query: 276 HLKIPNDGTDVWEIDPKHLKFGSKVASGSYGDLYRGTY-CSQDVAIKVLKPERINSDMQK 334
H++ D WEI + L+ K+ G +G+++ GT+ + VAIK LKP ++ +
Sbjct: 2 HMQTQGLAKDAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPE--- 58
Query: 335 EFAQEVFIMRKVRHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVF-KLPSLL 393
F QE +M+K+RH+ +VQ ++ P + IVTE+MS GS+ D+L G + +LP L+
Sbjct: 59 AFLQEAQVMKKLRHEKLVQLYAVVSEEP-IYIVTEYMSKGSLLDFLKGEMGKYLRLPQLV 117
Query: 394 KVAIDVSKGMNYLHQNNIIHRDLKAANLLMDENEVVKVADFGVARVKAQSGVMTAETGT- 452
+A ++ GM Y+ + N +HRDL AAN+L+ EN V KVADFG+AR+ + TA G
Sbjct: 118 DMAAQIASGMAYVERMNYVHRDLAAANILVGENLVCKVADFGLARL-IEDNEYTARQGAK 176
Query: 453 --YRWMAPEVIEHKPYDHKADVFSFGIVLWELLT-GKLPY 489
+W APE + + K+DV+SFGI+L EL T G++PY
Sbjct: 177 FPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPY 216
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 152 bits (384), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 81/212 (38%), Positives = 125/212 (58%), Gaps = 11/212 (5%)
Query: 285 DVWEIDPKHLKFGSKVASGSYGDLYRGTY--CSQDVAIKVLKPERINSDMQKEFAQEVFI 342
D WE++ + K+ G YG++Y G + S VA+K LK + + + EF +E +
Sbjct: 11 DKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE---EFLKEAAV 67
Query: 343 MRKVRHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKL-KGVFKLPSLLKVAIDVSK 401
M++++H N+VQ +G CT+ P I+TEFM+ G++ DYL + + LL +A +S
Sbjct: 68 MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISS 127
Query: 402 GMNYLHQNNIIHRDLKAANLLMDENEVVKVADFGVARVKAQSGVMTAETGT---YRWMAP 458
M YL + N IHRDL A N L+ EN +VKVADFG++R+ TA G +W AP
Sbjct: 128 AMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMT-GDTYTAHAGAKFPIKWTAP 186
Query: 459 EVIEHKPYDHKADVFSFGIVLWELLT-GKLPY 489
E + + + K+DV++FG++LWE+ T G PY
Sbjct: 187 ESLAYNKFSIKSDVWAFGVLLWEIATYGMSPY 218
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 152 bits (384), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 81/212 (38%), Positives = 125/212 (58%), Gaps = 11/212 (5%)
Query: 285 DVWEIDPKHLKFGSKVASGSYGDLYRGTY--CSQDVAIKVLKPERINSDMQKEFAQEVFI 342
D WE++ + K+ G YG++Y G + S VA+K LK + + + EF +E +
Sbjct: 11 DKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE---EFLKEAAV 67
Query: 343 MRKVRHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKL-KGVFKLPSLLKVAIDVSK 401
M++++H N+VQ +G CT+ P I+TEFM+ G++ DYL + + LL +A +S
Sbjct: 68 MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISS 127
Query: 402 GMNYLHQNNIIHRDLKAANLLMDENEVVKVADFGVARVKAQSGVMTAETGT---YRWMAP 458
M YL + N IHRDL A N L+ EN +VKVADFG++R+ TA G +W AP
Sbjct: 128 AMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMT-GDTYTAHAGAKFPIKWTAP 186
Query: 459 EVIEHKPYDHKADVFSFGIVLWELLT-GKLPY 489
E + + + K+DV++FG++LWE+ T G PY
Sbjct: 187 ESLAYNKFSIKSDVWAFGVLLWEIATYGMSPY 218
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 152 bits (384), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 81/212 (38%), Positives = 125/212 (58%), Gaps = 11/212 (5%)
Query: 285 DVWEIDPKHLKFGSKVASGSYGDLYRGTY--CSQDVAIKVLKPERINSDMQKEFAQEVFI 342
D WE++ + K+ G YG++Y G + S VA+K LK + + + EF +E +
Sbjct: 8 DKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE---EFLKEAAV 64
Query: 343 MRKVRHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKL-KGVFKLPSLLKVAIDVSK 401
M++++H N+VQ +G CT+ P I+TEFM+ G++ DYL + + LL +A +S
Sbjct: 65 MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISS 124
Query: 402 GMNYLHQNNIIHRDLKAANLLMDENEVVKVADFGVARVKAQSGVMTAETGT---YRWMAP 458
M YL + N IHRDL A N L+ EN +VKVADFG++R+ TA G +W AP
Sbjct: 125 AMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMT-GDTYTAHAGAKFPIKWTAP 183
Query: 459 EVIEHKPYDHKADVFSFGIVLWELLT-GKLPY 489
E + + + K+DV++FG++LWE+ T G PY
Sbjct: 184 ESLAYNKFSIKSDVWAFGVLLWEIATYGMSPY 215
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 152 bits (384), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 81/212 (38%), Positives = 125/212 (58%), Gaps = 11/212 (5%)
Query: 285 DVWEIDPKHLKFGSKVASGSYGDLYRGTY--CSQDVAIKVLKPERINSDMQKEFAQEVFI 342
D WE++ + K+ G YG++Y G + S VA+K LK + + + EF +E +
Sbjct: 11 DKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE---EFLKEAAV 67
Query: 343 MRKVRHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKL-KGVFKLPSLLKVAIDVSK 401
M++++H N+VQ +G CT+ P I+TEFM+ G++ DYL + + LL +A +S
Sbjct: 68 MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISS 127
Query: 402 GMNYLHQNNIIHRDLKAANLLMDENEVVKVADFGVARVKAQSGVMTAETGT---YRWMAP 458
M YL + N IHRDL A N L+ EN +VKVADFG++R+ TA G +W AP
Sbjct: 128 AMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMT-GDTXTAHAGAKFPIKWTAP 186
Query: 459 EVIEHKPYDHKADVFSFGIVLWELLT-GKLPY 489
E + + + K+DV++FG++LWE+ T G PY
Sbjct: 187 ESLAYNKFSIKSDVWAFGVLLWEIATYGMSPY 218
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 152 bits (384), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 81/212 (38%), Positives = 125/212 (58%), Gaps = 11/212 (5%)
Query: 285 DVWEIDPKHLKFGSKVASGSYGDLYRGTY--CSQDVAIKVLKPERINSDMQKEFAQEVFI 342
D WE++ + K+ G YG++Y G + S VA+K LK + + + EF +E +
Sbjct: 8 DKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE---EFLKEAAV 64
Query: 343 MRKVRHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKL-KGVFKLPSLLKVAIDVSK 401
M++++H N+VQ +G CT+ P I+TEFM+ G++ DYL + + LL +A +S
Sbjct: 65 MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISS 124
Query: 402 GMNYLHQNNIIHRDLKAANLLMDENEVVKVADFGVARVKAQSGVMTAETGT---YRWMAP 458
M YL + N IHRDL A N L+ EN +VKVADFG++R+ TA G +W AP
Sbjct: 125 AMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMT-GDTYTAHAGAKFPIKWTAP 183
Query: 459 EVIEHKPYDHKADVFSFGIVLWELLT-GKLPY 489
E + + + K+DV++FG++LWE+ T G PY
Sbjct: 184 ESLAYNKFSIKSDVWAFGVLLWEIATYGMSPY 215
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 152 bits (384), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 86/211 (40%), Positives = 132/211 (62%), Gaps = 11/211 (5%)
Query: 285 DVWEIDPKHLKFGSKVASGSYGDLYRGTY-CSQDVAIKVLKPERINSDMQKEFAQEVFIM 343
D WEI + L+ K+ G +G+++ GT+ + VAIK LKP ++ + F QE +M
Sbjct: 1 DAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA---FLQEAQVM 57
Query: 344 RKVRHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVF-KLPSLLKVAIDVSKG 402
+K+RH+ +VQ ++ P + IVTE+MS GS+ D+L G + +LP L+ +A ++ G
Sbjct: 58 KKLRHEKLVQLYAVVSEEP-IXIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASG 116
Query: 403 MNYLHQNNIIHRDLKAANLLMDENEVVKVADFGVARVKAQSGVMTAETGT---YRWMAPE 459
M Y+ + N +HRDL+AAN+L+ EN V KVADFG+AR+ + TA G +W APE
Sbjct: 117 MAYVERMNYVHRDLRAANILVGENLVCKVADFGLARL-IEDNEXTARQGAKFPIKWTAPE 175
Query: 460 VIEHKPYDHKADVFSFGIVLWELLT-GKLPY 489
+ + K+DV+SFGI+L EL T G++PY
Sbjct: 176 AALYGRFTIKSDVWSFGILLTELTTKGRVPY 206
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 152 bits (384), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 81/212 (38%), Positives = 125/212 (58%), Gaps = 11/212 (5%)
Query: 285 DVWEIDPKHLKFGSKVASGSYGDLYRGTY--CSQDVAIKVLKPERINSDMQKEFAQEVFI 342
D WE++ + K+ G YG++Y G + S VA+K LK + + + EF +E +
Sbjct: 6 DKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE---EFLKEAAV 62
Query: 343 MRKVRHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKL-KGVFKLPSLLKVAIDVSK 401
M++++H N+VQ +G CT+ P I+TEFM+ G++ DYL + + LL +A +S
Sbjct: 63 MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISS 122
Query: 402 GMNYLHQNNIIHRDLKAANLLMDENEVVKVADFGVARVKAQSGVMTAETGT---YRWMAP 458
M YL + N IHRDL A N L+ EN +VKVADFG++R+ TA G +W AP
Sbjct: 123 AMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMT-GDTYTAHAGAKFPIKWTAP 181
Query: 459 EVIEHKPYDHKADVFSFGIVLWELLT-GKLPY 489
E + + + K+DV++FG++LWE+ T G PY
Sbjct: 182 ESLAYNKFSIKSDVWAFGVLLWEIATYGMSPY 213
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 152 bits (384), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 81/212 (38%), Positives = 125/212 (58%), Gaps = 11/212 (5%)
Query: 285 DVWEIDPKHLKFGSKVASGSYGDLYRGTY--CSQDVAIKVLKPERINSDMQKEFAQEVFI 342
D WE++ + K+ G YG++Y G + S VA+K LK + + + EF +E +
Sbjct: 7 DKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE---EFLKEAAV 63
Query: 343 MRKVRHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKL-KGVFKLPSLLKVAIDVSK 401
M++++H N+VQ +G CT+ P I+TEFM+ G++ DYL + + LL +A +S
Sbjct: 64 MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISS 123
Query: 402 GMNYLHQNNIIHRDLKAANLLMDENEVVKVADFGVARVKAQSGVMTAETGT---YRWMAP 458
M YL + N IHRDL A N L+ EN +VKVADFG++R+ TA G +W AP
Sbjct: 124 AMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMT-GDTYTAPAGAKFPIKWTAP 182
Query: 459 EVIEHKPYDHKADVFSFGIVLWELLT-GKLPY 489
E + + + K+DV++FG++LWE+ T G PY
Sbjct: 183 ESLAYNKFSIKSDVWAFGVLLWEIATYGMSPY 214
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 152 bits (383), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 82/219 (37%), Positives = 127/219 (57%), Gaps = 11/219 (5%)
Query: 285 DVWEIDPKHLKFGSKVASGSYGDLYRGTY--CSQDVAIKVLKPERINSDMQKEFAQEVFI 342
D WE++ + K+ G YG++Y G + S VA+K LK + + + EF +E +
Sbjct: 4 DKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE---EFLKEAAV 60
Query: 343 MRKVRHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKL-KGVFKLPSLLKVAIDVSK 401
M++++H N+VQ +G CT+ P I+ EFM+ G++ DYL + + LL +A +S
Sbjct: 61 MKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISS 120
Query: 402 GMNYLHQNNIIHRDLKAANLLMDENEVVKVADFGVARVKAQSGVMTAETGT---YRWMAP 458
M YL + N IHRDL A N L+ EN +VKVADFG++R+ TA G +W AP
Sbjct: 121 AMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMT-GDTXTAHAGAKFPIKWTAP 179
Query: 459 EVIEHKPYDHKADVFSFGIVLWELLT-GKLPYEYLTPLQ 496
E + + + K+DV++FG++LWE+ T G PY + P Q
Sbjct: 180 ESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDPSQ 218
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 152 bits (383), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 81/212 (38%), Positives = 125/212 (58%), Gaps = 11/212 (5%)
Query: 285 DVWEIDPKHLKFGSKVASGSYGDLYRGTY--CSQDVAIKVLKPERINSDMQKEFAQEVFI 342
D WE++ + K+ G YG++Y G + S VA+K LK + + + EF +E +
Sbjct: 6 DKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE---EFLKEAAV 62
Query: 343 MRKVRHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKL-KGVFKLPSLLKVAIDVSK 401
M++++H N+VQ +G CT+ P I+TEFM+ G++ DYL + + LL +A +S
Sbjct: 63 MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISS 122
Query: 402 GMNYLHQNNIIHRDLKAANLLMDENEVVKVADFGVARVKAQSGVMTAETGT---YRWMAP 458
M YL + N IHRDL A N L+ EN +VKVADFG++R+ TA G +W AP
Sbjct: 123 AMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMT-GDTYTAHAGAKFPIKWTAP 181
Query: 459 EVIEHKPYDHKADVFSFGIVLWELLT-GKLPY 489
E + + + K+DV++FG++LWE+ T G PY
Sbjct: 182 ESLAYNKFSIKSDVWAFGVLLWEIATYGMSPY 213
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 152 bits (383), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 81/217 (37%), Positives = 126/217 (58%), Gaps = 11/217 (5%)
Query: 280 PNDGTDVWEIDPKHLKFGSKVASGSYGDLYRGTY--CSQDVAIKVLKPERINSDMQKEFA 337
P+ D WE++ + K+ G YG++Y G + S VA+K LK + + + EF
Sbjct: 2 PSPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE---EFL 58
Query: 338 QEVFIMRKVRHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKL-KGVFKLPSLLKVA 396
+E +M++++H N+VQ +G CT+ P I+ EFM+ G++ DYL + + LL +A
Sbjct: 59 KEAAVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVNAVVLLYMA 118
Query: 397 IDVSKGMNYLHQNNIIHRDLKAANLLMDENEVVKVADFGVARVKAQSGVMTAETGT---Y 453
+S M YL + N IHRDL A N L+ EN +VKVADFG++R+ TA G
Sbjct: 119 TQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMT-GDTXTAHAGAKFPI 177
Query: 454 RWMAPEVIEHKPYDHKADVFSFGIVLWELLT-GKLPY 489
+W APE + + + K+DV++FG++LWE+ T G PY
Sbjct: 178 KWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPY 214
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 152 bits (383), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 81/212 (38%), Positives = 125/212 (58%), Gaps = 11/212 (5%)
Query: 285 DVWEIDPKHLKFGSKVASGSYGDLYRGTY--CSQDVAIKVLKPERINSDMQKEFAQEVFI 342
D WE++ + K+ G YG++Y G + S VA+K LK + + + EF +E +
Sbjct: 8 DKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE---EFLKEAAV 64
Query: 343 MRKVRHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKL-KGVFKLPSLLKVAIDVSK 401
M++++H N+VQ +G CT+ P I+TEFM+ G++ DYL + + LL +A +S
Sbjct: 65 MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISS 124
Query: 402 GMNYLHQNNIIHRDLKAANLLMDENEVVKVADFGVARVKAQSGVMTAETGT---YRWMAP 458
M YL + N IHRDL A N L+ EN +VKVADFG++R+ TA G +W AP
Sbjct: 125 AMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMT-GDTYTAPAGAKFPIKWTAP 183
Query: 459 EVIEHKPYDHKADVFSFGIVLWELLT-GKLPY 489
E + + + K+DV++FG++LWE+ T G PY
Sbjct: 184 ESLAYNKFSIKSDVWAFGVLLWEIATYGMSPY 215
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 152 bits (383), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 86/211 (40%), Positives = 132/211 (62%), Gaps = 11/211 (5%)
Query: 285 DVWEIDPKHLKFGSKVASGSYGDLYRGTY-CSQDVAIKVLKPERINSDMQKEFAQEVFIM 343
D WEI + L+ K+ G +G+++ GT+ + VAIK LKP ++ + F QE +M
Sbjct: 4 DAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA---FLQEAQVM 60
Query: 344 RKVRHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVF-KLPSLLKVAIDVSKG 402
+K+RH+ +VQ ++ P + IVTE+MS GS+ D+L G + +LP L+ +A ++ G
Sbjct: 61 KKLRHEKLVQLYAVVSEEP-IYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASG 119
Query: 403 MNYLHQNNIIHRDLKAANLLMDENEVVKVADFGVARVKAQSGVMTAETGT---YRWMAPE 459
M Y+ + N +HRDL+AAN+L+ EN V KVADFG+AR+ + TA G +W APE
Sbjct: 120 MAYVERMNYVHRDLRAANILVGENLVCKVADFGLARL-IEDNEYTARQGAKFPIKWTAPE 178
Query: 460 VIEHKPYDHKADVFSFGIVLWELLT-GKLPY 489
+ + K+DV+SFGI+L EL T G++PY
Sbjct: 179 AALYGRFTIKSDVWSFGILLTELTTKGRVPY 209
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 152 bits (383), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 86/220 (39%), Positives = 134/220 (60%), Gaps = 11/220 (5%)
Query: 276 HLKIPNDGTDVWEIDPKHLKFGSKVASGSYGDLYRGTY-CSQDVAIKVLKPERINSDMQK 334
H++ D WEI + L+ K+ G +G+++ GT+ + VAIK LKP ++ +
Sbjct: 2 HMQTQGLAKDAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPE--- 58
Query: 335 EFAQEVFIMRKVRHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVF-KLPSLL 393
F QE +M+K+RH+ +VQ ++ P + IVTE+MS G + D+L G + +LP L+
Sbjct: 59 AFLQEAQVMKKLRHEKLVQLYAVVSEEP-IYIVTEYMSKGCLLDFLKGEMGKYLRLPQLV 117
Query: 394 KVAIDVSKGMNYLHQNNIIHRDLKAANLLMDENEVVKVADFGVARVKAQSGVMTAETGT- 452
+A ++ GM Y+ + N +HRDL+AAN+L+ EN V KVADFG+AR+ + TA G
Sbjct: 118 DMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARL-IEDNEYTARQGAK 176
Query: 453 --YRWMAPEVIEHKPYDHKADVFSFGIVLWELLT-GKLPY 489
+W APE + + K+DV+SFGI+L EL T G++PY
Sbjct: 177 FPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPY 216
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 151 bits (382), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 80/212 (37%), Positives = 125/212 (58%), Gaps = 11/212 (5%)
Query: 285 DVWEIDPKHLKFGSKVASGSYGDLYRGTY--CSQDVAIKVLKPERINSDMQKEFAQEVFI 342
D WE++ + K+ G YG++Y G + S VA+K LK + + + EF +E +
Sbjct: 213 DKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE---EFLKEAAV 269
Query: 343 MRKVRHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKL-KGVFKLPSLLKVAIDVSK 401
M++++H N+VQ +G CT+ P I+TEFM+ G++ DYL + + LL +A +S
Sbjct: 270 MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISS 329
Query: 402 GMNYLHQNNIIHRDLKAANLLMDENEVVKVADFGVARVKAQSGVMTAETGT---YRWMAP 458
M YL + N IHR+L A N L+ EN +VKVADFG++R+ TA G +W AP
Sbjct: 330 AMEYLEKKNFIHRNLAARNCLVGENHLVKVADFGLSRLMT-GDTYTAHAGAKFPIKWTAP 388
Query: 459 EVIEHKPYDHKADVFSFGIVLWELLT-GKLPY 489
E + + + K+DV++FG++LWE+ T G PY
Sbjct: 389 ESLAYNKFSIKSDVWAFGVLLWEIATYGMSPY 420
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 151 bits (382), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 86/220 (39%), Positives = 134/220 (60%), Gaps = 11/220 (5%)
Query: 276 HLKIPNDGTDVWEIDPKHLKFGSKVASGSYGDLYRGTY-CSQDVAIKVLKPERINSDMQK 334
H++ D WEI + L+ K+ G +G+++ GT+ + VAIK LKP ++ +
Sbjct: 2 HMQTQGLAKDAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPE--- 58
Query: 335 EFAQEVFIMRKVRHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVF-KLPSLL 393
F QE +M+K+RH+ +VQ ++ P + IV E+MS GS+ D+L G + +LP L+
Sbjct: 59 AFLQEAQVMKKLRHEKLVQLYAVVSEEP-IYIVCEYMSKGSLLDFLKGEMGKYLRLPQLV 117
Query: 394 KVAIDVSKGMNYLHQNNIIHRDLKAANLLMDENEVVKVADFGVARVKAQSGVMTAETGT- 452
+A ++ GM Y+ + N +HRDL+AAN+L+ EN V KVADFG+AR+ + TA G
Sbjct: 118 DMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARL-IEDNEYTARQGAK 176
Query: 453 --YRWMAPEVIEHKPYDHKADVFSFGIVLWELLT-GKLPY 489
+W APE + + K+DV+SFGI+L EL T G++PY
Sbjct: 177 FPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPY 216
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 151 bits (382), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 86/211 (40%), Positives = 132/211 (62%), Gaps = 11/211 (5%)
Query: 285 DVWEIDPKHLKFGSKVASGSYGDLYRGTY-CSQDVAIKVLKPERINSDMQKEFAQEVFIM 343
D WEI + L+ K+ G +G+++ GT+ + VAIK LKP ++ + F QE +M
Sbjct: 2 DAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA---FLQEAQVM 58
Query: 344 RKVRHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVF-KLPSLLKVAIDVSKG 402
+K+RH+ +VQ ++ P + IVTE+MS GS+ D+L G + +LP L+ +A ++ G
Sbjct: 59 KKLRHEKLVQLYAVVSEEP-IYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASG 117
Query: 403 MNYLHQNNIIHRDLKAANLLMDENEVVKVADFGVARVKAQSGVMTAETGT---YRWMAPE 459
M Y+ + N +HRDL+AAN+L+ EN V KVADFG+AR+ + TA G +W APE
Sbjct: 118 MAYVERMNYVHRDLRAANILVGENLVCKVADFGLARL-IEDNEYTARQGAKFPIKWTAPE 176
Query: 460 VIEHKPYDHKADVFSFGIVLWELLT-GKLPY 489
+ + K+DV+SFGI+L EL T G++PY
Sbjct: 177 AALYGRFTIKSDVWSFGILLTELTTKGRVPY 207
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 151 bits (382), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 80/212 (37%), Positives = 125/212 (58%), Gaps = 11/212 (5%)
Query: 285 DVWEIDPKHLKFGSKVASGSYGDLYRGTY--CSQDVAIKVLKPERINSDMQKEFAQEVFI 342
D WE++ + K+ G YG++Y G + S VA+K LK + + + EF +E +
Sbjct: 210 DKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE---EFLKEAAV 266
Query: 343 MRKVRHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKL-KGVFKLPSLLKVAIDVSK 401
M++++H N+VQ +G CT+ P I+TEFM+ G++ DYL + + LL +A +S
Sbjct: 267 MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISS 326
Query: 402 GMNYLHQNNIIHRDLKAANLLMDENEVVKVADFGVARVKAQSGVMTAETGT---YRWMAP 458
M YL + N IHR+L A N L+ EN +VKVADFG++R+ TA G +W AP
Sbjct: 327 AMEYLEKKNFIHRNLAARNCLVGENHLVKVADFGLSRLMT-GDTYTAHAGAKFPIKWTAP 385
Query: 459 EVIEHKPYDHKADVFSFGIVLWELLT-GKLPY 489
E + + + K+DV++FG++LWE+ T G PY
Sbjct: 386 ESLAYNKFSIKSDVWAFGVLLWEIATYGMSPY 417
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 151 bits (382), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 86/220 (39%), Positives = 134/220 (60%), Gaps = 11/220 (5%)
Query: 276 HLKIPNDGTDVWEIDPKHLKFGSKVASGSYGDLYRGTY-CSQDVAIKVLKPERINSDMQK 334
H++ D WEI + L+ K+ G +G+++ GT+ + VAIK LKP ++ +
Sbjct: 2 HMQTQGLAKDAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPE--- 58
Query: 335 EFAQEVFIMRKVRHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVF-KLPSLL 393
F QE +M+K+RH+ +VQ ++ P + IV E+MS GS+ D+L G + +LP L+
Sbjct: 59 AFLQEAQVMKKLRHEKLVQLYAVVSEEP-IYIVIEYMSKGSLLDFLKGEMGKYLRLPQLV 117
Query: 394 KVAIDVSKGMNYLHQNNIIHRDLKAANLLMDENEVVKVADFGVARVKAQSGVMTAETGT- 452
+A ++ GM Y+ + N +HRDL+AAN+L+ EN V KVADFG+AR+ + TA G
Sbjct: 118 DMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARL-IEDNEXTARQGAK 176
Query: 453 --YRWMAPEVIEHKPYDHKADVFSFGIVLWELLT-GKLPY 489
+W APE + + K+DV+SFGI+L EL T G++PY
Sbjct: 177 FPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPY 216
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 151 bits (381), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 80/212 (37%), Positives = 125/212 (58%), Gaps = 11/212 (5%)
Query: 285 DVWEIDPKHLKFGSKVASGSYGDLYRGTY--CSQDVAIKVLKPERINSDMQKEFAQEVFI 342
D WE++ + K+ G YG++Y G + S VA+K LK + + + EF +E +
Sbjct: 252 DKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE---EFLKEAAV 308
Query: 343 MRKVRHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKL-KGVFKLPSLLKVAIDVSK 401
M++++H N+VQ +G CT+ P I+TEFM+ G++ DYL + + LL +A +S
Sbjct: 309 MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISS 368
Query: 402 GMNYLHQNNIIHRDLKAANLLMDENEVVKVADFGVARVKAQSGVMTAETGT---YRWMAP 458
M YL + N IHR+L A N L+ EN +VKVADFG++R+ TA G +W AP
Sbjct: 369 AMEYLEKKNFIHRNLAARNCLVGENHLVKVADFGLSRLMT-GDTYTAHAGAKFPIKWTAP 427
Query: 459 EVIEHKPYDHKADVFSFGIVLWELLT-GKLPY 489
E + + + K+DV++FG++LWE+ T G PY
Sbjct: 428 ESLAYNKFSIKSDVWAFGVLLWEIATYGMSPY 459
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 151 bits (381), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 86/220 (39%), Positives = 134/220 (60%), Gaps = 11/220 (5%)
Query: 276 HLKIPNDGTDVWEIDPKHLKFGSKVASGSYGDLYRGTY-CSQDVAIKVLKPERINSDMQK 334
H++ D WEI + L+ K+ G +G+++ GT+ + VAIK LKP ++ +
Sbjct: 2 HMQTQGLAKDAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPE--- 58
Query: 335 EFAQEVFIMRKVRHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVF-KLPSLL 393
F QE +M+K+RH+ +VQ ++ P + IV E+MS GS+ D+L G + +LP L+
Sbjct: 59 AFLQEAQVMKKLRHEKLVQLYAVVSEEP-IYIVIEYMSKGSLLDFLKGEMGKYLRLPQLV 117
Query: 394 KVAIDVSKGMNYLHQNNIIHRDLKAANLLMDENEVVKVADFGVARVKAQSGVMTAETGT- 452
+A ++ GM Y+ + N +HRDL+AAN+L+ EN V KVADFG+AR+ + TA G
Sbjct: 118 DMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARL-IEDNEYTARQGAK 176
Query: 453 --YRWMAPEVIEHKPYDHKADVFSFGIVLWELLT-GKLPY 489
+W APE + + K+DV+SFGI+L EL T G++PY
Sbjct: 177 FPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPY 216
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 151 bits (381), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 77/219 (35%), Positives = 130/219 (59%), Gaps = 7/219 (3%)
Query: 289 IDPKHLKFGSKVASGSYGDLYRGTYCSQ-DVAIKVLKPERINSDMQKEFAQEVFIMRKVR 347
IDPK L F ++ +G +G + G + Q DVAIK++K ++ D EF +E +M +
Sbjct: 1 IDPKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSED---EFIEEAKVMMNLS 57
Query: 348 HKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLH 407
H+ +VQ G CTK + I+TE+M+ G + +YL +++ F+ LL++ DV + M YL
Sbjct: 58 HEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLE 117
Query: 408 QNNIIHRDLKAANLLMDENEVVKVADFGVARVKAQSGVMTAETGTY--RWMAPEVIEHKP 465
+HRDL A N L+++ VVKV+DFG++R ++ + RW PEV+ +
Sbjct: 118 SKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSK 177
Query: 466 YDHKADVFSFGIVLWELLT-GKLPYEYLTPLQAAVGVVQ 503
+ K+D+++FG+++WE+ + GK+PYE T + A + Q
Sbjct: 178 FSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQ 216
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 150 bits (379), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 80/212 (37%), Positives = 124/212 (58%), Gaps = 11/212 (5%)
Query: 285 DVWEIDPKHLKFGSKVASGSYGDLYRGTY--CSQDVAIKVLKPERINSDMQKEFAQEVFI 342
D WE++ + K+ G YG++Y G + S VA+K LK + + + EF +E +
Sbjct: 6 DKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE---EFLKEAAV 62
Query: 343 MRKVRHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKL-KGVFKLPSLLKVAIDVSK 401
M++++H N+VQ +G CT+ P I+ EFM+ G++ DYL + + LL +A +S
Sbjct: 63 MKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISS 122
Query: 402 GMNYLHQNNIIHRDLKAANLLMDENEVVKVADFGVARVKAQSGVMTAETGT---YRWMAP 458
M YL + N IHRDL A N L+ EN +VKVADFG++R+ TA G +W AP
Sbjct: 123 AMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMT-GDTYTAHAGAKFPIKWTAP 181
Query: 459 EVIEHKPYDHKADVFSFGIVLWELLT-GKLPY 489
E + + + K+DV++FG++LWE+ T G PY
Sbjct: 182 ESLAYNKFSIKSDVWAFGVLLWEIATYGMSPY 213
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 150 bits (378), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 80/212 (37%), Positives = 124/212 (58%), Gaps = 11/212 (5%)
Query: 285 DVWEIDPKHLKFGSKVASGSYGDLYRGTY--CSQDVAIKVLKPERINSDMQKEFAQEVFI 342
D WE++ + K+ G YG++Y G + S VA+K LK + + + EF +E +
Sbjct: 11 DKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE---EFLKEAAV 67
Query: 343 MRKVRHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKL-KGVFKLPSLLKVAIDVSK 401
M++++H N+VQ +G CT+ P I+ EFM+ G++ DYL + + LL +A +S
Sbjct: 68 MKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISS 127
Query: 402 GMNYLHQNNIIHRDLKAANLLMDENEVVKVADFGVARVKAQSGVMTAETGT---YRWMAP 458
M YL + N IHRDL A N L+ EN +VKVADFG++R+ TA G +W AP
Sbjct: 128 AMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMT-GDTYTAHAGAKFPIKWTAP 186
Query: 459 EVIEHKPYDHKADVFSFGIVLWELLT-GKLPY 489
E + + + K+DV++FG++LWE+ T G PY
Sbjct: 187 ESLAYNKFSIKSDVWAFGVLLWEIATYGMSPY 218
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 150 bits (378), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 80/212 (37%), Positives = 124/212 (58%), Gaps = 11/212 (5%)
Query: 285 DVWEIDPKHLKFGSKVASGSYGDLYRGTY--CSQDVAIKVLKPERINSDMQKEFAQEVFI 342
D WE++ + K+ G YG++Y G + S VA+K LK + + + EF +E +
Sbjct: 6 DKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE---EFLKEAAV 62
Query: 343 MRKVRHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKL-KGVFKLPSLLKVAIDVSK 401
M++++H N+VQ +G CT+ P I+ EFM+ G++ DYL + + LL +A +S
Sbjct: 63 MKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISS 122
Query: 402 GMNYLHQNNIIHRDLKAANLLMDENEVVKVADFGVARVKAQSGVMTAETGT---YRWMAP 458
M YL + N IHRDL A N L+ EN +VKVADFG++R+ TA G +W AP
Sbjct: 123 AMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMT-GDTYTAHAGAKFPIKWTAP 181
Query: 459 EVIEHKPYDHKADVFSFGIVLWELLT-GKLPY 489
E + + + K+DV++FG++LWE+ T G PY
Sbjct: 182 ESLAYNKFSIKSDVWAFGVLLWEIATYGMSPY 213
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 149 bits (377), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 84/211 (39%), Positives = 132/211 (62%), Gaps = 11/211 (5%)
Query: 285 DVWEIDPKHLKFGSKVASGSYGDLYRGTY-CSQDVAIKVLKPERINSDMQKEFAQEVFIM 343
D WEI + L+ K+ G +G+++ GT+ + VAIK LKP ++ + F QE +M
Sbjct: 8 DAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA---FLQEAQVM 64
Query: 344 RKVRHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVF-KLPSLLKVAIDVSKG 402
+K+RH+ +VQ ++ P + IVTE+M+ GS+ D+L G + +LP L+ ++ ++ G
Sbjct: 65 KKLRHEKLVQLYAVVSEEP-IYIVTEYMNKGSLLDFLKGETGKYLRLPQLVDMSAQIASG 123
Query: 403 MNYLHQNNIIHRDLKAANLLMDENEVVKVADFGVARVKAQSGVMTAETGT---YRWMAPE 459
M Y+ + N +HRDL+AAN+L+ EN V KVADFG+AR+ + TA G +W APE
Sbjct: 124 MAYVERMNYVHRDLRAANILVGENLVCKVADFGLARL-IEDNEWTARQGAKFPIKWTAPE 182
Query: 460 VIEHKPYDHKADVFSFGIVLWELLT-GKLPY 489
+ + K+DV+SFGI+L EL T G++PY
Sbjct: 183 AALYGRFTIKSDVWSFGILLTELTTKGRVPY 213
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 149 bits (377), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 85/220 (38%), Positives = 133/220 (60%), Gaps = 11/220 (5%)
Query: 276 HLKIPNDGTDVWEIDPKHLKFGSKVASGSYGDLYRGTY-CSQDVAIKVLKPERINSDMQK 334
H++ D WEI + L+ K+ G +G+++ GT+ + VAIK LKP ++ +
Sbjct: 2 HMQTQGLAKDAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPE--- 58
Query: 335 EFAQEVFIMRKVRHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVF-KLPSLL 393
F QE +M+K+RH+ +VQ ++ P + IV E+MS G + D+L G + +LP L+
Sbjct: 59 AFLQEAQVMKKLRHEKLVQLYAVVSEEP-IYIVMEYMSKGCLLDFLKGEMGKYLRLPQLV 117
Query: 394 KVAIDVSKGMNYLHQNNIIHRDLKAANLLMDENEVVKVADFGVARVKAQSGVMTAETGT- 452
+A ++ GM Y+ + N +HRDL+AAN+L+ EN V KVADFG+AR+ + TA G
Sbjct: 118 DMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARL-IEDNEYTARQGAK 176
Query: 453 --YRWMAPEVIEHKPYDHKADVFSFGIVLWELLT-GKLPY 489
+W APE + + K+DV+SFGI+L EL T G++PY
Sbjct: 177 FPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPY 216
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 149 bits (377), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 84/211 (39%), Positives = 132/211 (62%), Gaps = 11/211 (5%)
Query: 285 DVWEIDPKHLKFGSKVASGSYGDLYRGTY-CSQDVAIKVLKPERINSDMQKEFAQEVFIM 343
D WEI + L+ K+ G +G+++ GT+ + VAIK LKP ++ + F QE +M
Sbjct: 8 DAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA---FLQEAQVM 64
Query: 344 RKVRHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVF-KLPSLLKVAIDVSKG 402
+K+RH+ +VQ ++ P + IVTE+M+ GS+ D+L G + +LP L+ ++ ++ G
Sbjct: 65 KKLRHEKLVQLYAVVSEEP-IYIVTEYMNKGSLLDFLKGETGKYLRLPQLVDMSAQIASG 123
Query: 403 MNYLHQNNIIHRDLKAANLLMDENEVVKVADFGVARVKAQSGVMTAETGT---YRWMAPE 459
M Y+ + N +HRDL+AAN+L+ EN V KVADFG+AR+ + TA G +W APE
Sbjct: 124 MAYVERMNYVHRDLRAANILVGENLVCKVADFGLARL-IEDNEYTARQGAKFPIKWTAPE 182
Query: 460 VIEHKPYDHKADVFSFGIVLWELLT-GKLPY 489
+ + K+DV+SFGI+L EL T G++PY
Sbjct: 183 AALYGRFTIKSDVWSFGILLTELTTKGRVPY 213
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 149 bits (376), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 87/223 (39%), Positives = 131/223 (58%), Gaps = 14/223 (6%)
Query: 287 WEIDPKHLKFGSKVASGSYGDLYRGTYCSQDVAIKVLKPERINSDMQKEFAQEVFIMRKV 346
W ++ K LK + G +GD+ G Y VA+K +K N + F E +M ++
Sbjct: 16 WALNMKELKLLQTIGKGEFGDVMLGDYRGNKVAVKCIK----NDATAQAFLAEASVMTQL 71
Query: 347 RHKNVVQFIGACTKPPS-LCIVTEFMSGGSVYDYLH-KLKGVFKLPSLLKVAIDVSKGMN 404
RH N+VQ +G + L IVTE+M+ GS+ DYL + + V LLK ++DV + M
Sbjct: 72 RHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAME 131
Query: 405 YLHQNNIIHRDLKAANLLMDENEVVKVADFGVARVKAQSGVMTAETGTY--RWMAPEVIE 462
YL NN +HRDL A N+L+ E+ V KV+DFG+ + +A S T +TG +W APE +
Sbjct: 132 YLEGNNFVHRDLAARNVLVSEDNVAKVSDFGLTK-EASS---TQDTGKLPVKWTAPEALR 187
Query: 463 HKPYDHKADVFSFGIVLWELLT-GKLPYEYLTPLQAAVGVVQK 504
K + K+DV+SFGI+LWE+ + G++PY + PL+ V V+K
Sbjct: 188 EKKFSTKSDVWSFGILLWEIYSFGRVPYPRI-PLKDVVPRVEK 229
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 149 bits (376), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 87/223 (39%), Positives = 131/223 (58%), Gaps = 14/223 (6%)
Query: 287 WEIDPKHLKFGSKVASGSYGDLYRGTYCSQDVAIKVLKPERINSDMQKEFAQEVFIMRKV 346
W ++ K LK + G +GD+ G Y VA+K +K N + F E +M ++
Sbjct: 1 WALNMKELKLLQTIGKGEFGDVMLGDYRGNKVAVKCIK----NDATAQAFLAEASVMTQL 56
Query: 347 RHKNVVQFIGACTKPPS-LCIVTEFMSGGSVYDYLH-KLKGVFKLPSLLKVAIDVSKGMN 404
RH N+VQ +G + L IVTE+M+ GS+ DYL + + V LLK ++DV + M
Sbjct: 57 RHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAME 116
Query: 405 YLHQNNIIHRDLKAANLLMDENEVVKVADFGVARVKAQSGVMTAETGTY--RWMAPEVIE 462
YL NN +HRDL A N+L+ E+ V KV+DFG+ + +A S T +TG +W APE +
Sbjct: 117 YLEGNNFVHRDLAARNVLVSEDNVAKVSDFGLTK-EASS---TQDTGKLPVKWTAPEALR 172
Query: 463 HKPYDHKADVFSFGIVLWELLT-GKLPYEYLTPLQAAVGVVQK 504
K + K+DV+SFGI+LWE+ + G++PY + PL+ V V+K
Sbjct: 173 EKKFSTKSDVWSFGILLWEIYSFGRVPYPRI-PLKDVVPRVEK 214
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 149 bits (375), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 85/209 (40%), Positives = 131/209 (62%), Gaps = 11/209 (5%)
Query: 287 WEIDPKHLKFGSKVASGSYGDLYRGTY-CSQDVAIKVLKPERINSDMQKEFAQEVFIMRK 345
WEI + L+ K+ G +G+++ GT+ + VAIK LKP ++ + F QE +M+K
Sbjct: 2 WEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPE---AFLQEAQVMKK 58
Query: 346 VRHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVF-KLPSLLKVAIDVSKGMN 404
+RH+ +VQ ++ P + IVTE+MS GS+ D+L G + +LP L+ +A ++ GM
Sbjct: 59 LRHEKLVQLYAVVSEEP-IYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMA 117
Query: 405 YLHQNNIIHRDLKAANLLMDENEVVKVADFGVARVKAQSGVMTAETGT---YRWMAPEVI 461
Y+ + N +HRDL+AAN+L+ EN V KVADFG+AR+ + TA G +W APE
Sbjct: 118 YVERMNYVHRDLRAANILVGENLVCKVADFGLARL-IEDNEYTARQGAKFPIKWTAPEAA 176
Query: 462 EHKPYDHKADVFSFGIVLWELLT-GKLPY 489
+ + K+DV+SFGI+L EL T G++PY
Sbjct: 177 LYGRFTIKSDVWSFGILLTELTTKGRVPY 205
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 149 bits (375), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 87/223 (39%), Positives = 131/223 (58%), Gaps = 14/223 (6%)
Query: 287 WEIDPKHLKFGSKVASGSYGDLYRGTYCSQDVAIKVLKPERINSDMQKEFAQEVFIMRKV 346
W ++ K LK + G +GD+ G Y VA+K +K N + F E +M ++
Sbjct: 188 WALNMKELKLLQTIGKGEFGDVMLGDYRGNKVAVKCIK----NDATAQAFLAEASVMTQL 243
Query: 347 RHKNVVQFIGACTKPPS-LCIVTEFMSGGSVYDYLH-KLKGVFKLPSLLKVAIDVSKGMN 404
RH N+VQ +G + L IVTE+M+ GS+ DYL + + V LLK ++DV + M
Sbjct: 244 RHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAME 303
Query: 405 YLHQNNIIHRDLKAANLLMDENEVVKVADFGVARVKAQSGVMTAETGTY--RWMAPEVIE 462
YL NN +HRDL A N+L+ E+ V KV+DFG+ + +A S T +TG +W APE +
Sbjct: 304 YLEGNNFVHRDLAARNVLVSEDNVAKVSDFGLTK-EASS---TQDTGKLPVKWTAPEALR 359
Query: 463 HKPYDHKADVFSFGIVLWELLT-GKLPYEYLTPLQAAVGVVQK 504
K + K+DV+SFGI+LWE+ + G++PY + PL+ V V+K
Sbjct: 360 EKKFSTKSDVWSFGILLWEIYSFGRVPYPRI-PLKDVVPRVEK 401
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 147 bits (372), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 82/212 (38%), Positives = 123/212 (58%), Gaps = 11/212 (5%)
Query: 285 DVWEIDPKHLKFGSKVASGSYGDLYRGTY--CSQDVAIKVLKPERINSDMQKEFAQEVFI 342
D WE++ + K+ G YG++Y G + S VA+K LK + + + EF +E +
Sbjct: 25 DKWEMERTDITMKHKLGGGQYGEVYVGVWKKYSLTVAVKTLKEDTMEVE---EFLKEAAV 81
Query: 343 MRKVRHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKL-KGVFKLPSLLKVAIDVSK 401
M++++H N+VQ +G CT P IVTE+M G++ DYL + + LL +A +S
Sbjct: 82 MKEIKHPNLVQLLGVCTLEPPFYIVTEYMPYGNLLDYLRECNREEVTAVVLLYMATQISS 141
Query: 402 GMNYLHQNNIIHRDLKAANLLMDENEVVKVADFGVARVKAQSGVMTAETGT---YRWMAP 458
M YL + N IHRDL A N L+ EN VVKVADFG++R+ TA G +W AP
Sbjct: 142 AMEYLEKKNFIHRDLAARNCLVGENHVVKVADFGLSRLMT-GDTYTAHAGAKFPIKWTAP 200
Query: 459 EVIEHKPYDHKADVFSFGIVLWELLT-GKLPY 489
E + + + K+DV++FG++LWE+ T G PY
Sbjct: 201 ESLAYNTFSIKSDVWAFGVLLWEIATYGMSPY 232
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 147 bits (371), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 86/223 (38%), Positives = 130/223 (58%), Gaps = 14/223 (6%)
Query: 287 WEIDPKHLKFGSKVASGSYGDLYRGTYCSQDVAIKVLKPERINSDMQKEFAQEVFIMRKV 346
W ++ K LK + G +GD+ G Y VA+K +K N + F E +M ++
Sbjct: 7 WALNMKELKLLQTIGKGEFGDVMLGDYRGNKVAVKCIK----NDATAQAFLAEASVMTQL 62
Query: 347 RHKNVVQFIGACTKPPS-LCIVTEFMSGGSVYDYLH-KLKGVFKLPSLLKVAIDVSKGMN 404
RH N+VQ +G + L IVTE+M+ GS+ DYL + + V LLK ++DV + M
Sbjct: 63 RHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAME 122
Query: 405 YLHQNNIIHRDLKAANLLMDENEVVKVADFGVARVKAQSGVMTAETGTY--RWMAPEVIE 462
YL NN +HRDL A N+L+ E+ V KV+DFG+ + +A S T +TG +W APE +
Sbjct: 123 YLEGNNFVHRDLAARNVLVSEDNVAKVSDFGLTK-EASS---TQDTGKLPVKWTAPEALR 178
Query: 463 HKPYDHKADVFSFGIVLWELLT-GKLPYEYLTPLQAAVGVVQK 504
+ K+DV+SFGI+LWE+ + G++PY + PL+ V V+K
Sbjct: 179 EAAFSTKSDVWSFGILLWEIYSFGRVPYPRI-PLKDVVPRVEK 220
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 146 bits (368), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 81/229 (35%), Positives = 130/229 (56%), Gaps = 20/229 (8%)
Query: 288 EIDPKHLKFGSKVASGSYGDLYRGTYCSQDVAIKVLK--PERINSDMQKEFAQEVFIMRK 345
EID L + G +G +YR + +VA+K + P+ S + QE +
Sbjct: 3 EIDFAELTLEEIIGIGGFGKVYRAFWIGDEVAVKAARHDPDEDISQTIENVRQEAKLFAM 62
Query: 346 VRHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPS--LLKVAIDVSKGM 403
++H N++ G C K P+LC+V EF GG L+++ ++P L+ A+ +++GM
Sbjct: 63 LKHPNIIALRGVCLKEPNLCLVMEFARGGP----LNRVLSGKRIPPDILVNWAVQIARGM 118
Query: 404 NYLHQNNI---IHRDLKAANLLMDE--------NEVVKVADFGVARVKAQSGVMTAETGT 452
NYLH I IHRDLK++N+L+ + N+++K+ DFG+AR ++ M+A G
Sbjct: 119 NYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAREWHRTTKMSA-AGA 177
Query: 453 YRWMAPEVIEHKPYDHKADVFSFGIVLWELLTGKLPYEYLTPLQAAVGV 501
Y WMAPEVI + +DV+S+G++LWELLTG++P+ + L A GV
Sbjct: 178 YAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVPFRGIDGLAVAYGV 226
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 145 bits (365), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 82/211 (38%), Positives = 133/211 (63%), Gaps = 11/211 (5%)
Query: 285 DVWEIDPKHLKFGSKVASGSYGDLYRGTY-CSQDVAIKVLKPERINSDMQKEFAQEVFIM 343
DVWEI + L+ ++ +G +G+++ GT+ + VAIK LKP ++ + F +E IM
Sbjct: 2 DVWEIPRESLQLIKRLGNGQFGEVWMGTWNGNTKVAIKTLKPGTMSPE---SFLEEAQIM 58
Query: 344 RKVRHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKG-VFKLPSLLKVAIDVSKG 402
+K++H +VQ ++ P + IVTE+M+ GS+ D+L +G KLP+L+ +A V+ G
Sbjct: 59 KKLKHDKLVQLYAVVSEEP-IYIVTEYMNKGSLLDFLKDGEGRALKLPNLVDMAAQVAAG 117
Query: 403 MNYLHQNNIIHRDLKAANLLMDENEVVKVADFGVARVKAQSGVMTAETGT---YRWMAPE 459
M Y+ + N IHRDL++AN+L+ + K+ADFG+AR+ + TA G +W APE
Sbjct: 118 MAYIERMNYIHRDLRSANILVGNGLICKIADFGLARL-IEDNEXTARQGAKFPIKWTAPE 176
Query: 460 VIEHKPYDHKADVFSFGIVLWELLT-GKLPY 489
+ + K+DV+SFGI+L EL+T G++PY
Sbjct: 177 AALYGRFTIKSDVWSFGILLTELVTKGRVPY 207
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 143 bits (361), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 76/210 (36%), Positives = 129/210 (61%), Gaps = 8/210 (3%)
Query: 285 DVWEIDPKHLKFGSKVASGSYGDLYRGTYC-SQDVAIKVLKPERINSDMQKEFAQEVFIM 343
D WEI + +K ++ +G +G+++ G Y S VA+K LKP ++ + F +E +M
Sbjct: 6 DAWEIPRESIKLVKRLGAGQFGEVWMGYYNNSTKVAVKTLKPGTMSV---QAFLEEANLM 62
Query: 344 RKVRHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKG-VFKLPSLLKVAIDVSKG 402
+ ++H +V+ T+ + I+TE+M+ GS+ D+L +G LP L+ + +++G
Sbjct: 63 KTLQHDKLVRLYAVVTREEPIYIITEYMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEG 122
Query: 403 MNYLHQNNIIHRDLKAANLLMDENEVVKVADFGVARVKAQSGVMTAETGTY--RWMAPEV 460
M Y+ + N IHRDL+AAN+L+ E+ + K+ADFG+ARV + E + +W APE
Sbjct: 123 MAYIERKNYIHRDLRAANVLVSESLMCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEA 182
Query: 461 IEHKPYDHKADVFSFGIVLWELLT-GKLPY 489
I + K+DV+SFGI+L+E++T GK+PY
Sbjct: 183 INFGCFTIKSDVWSFGILLYEIVTYGKIPY 212
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 143 bits (360), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 78/210 (37%), Positives = 127/210 (60%), Gaps = 9/210 (4%)
Query: 285 DVWEIDPKHLKFGSKVASGSYGDLYRGTYCSQ-DVAIKVLKPERINSDMQKEFAQEVFIM 343
D WEI + LK K+ +G +G+++ TY VA+K +KP ++ + F E +M
Sbjct: 181 DAWEIPRESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGSMSVEA---FLAEANVM 237
Query: 344 RKVRHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFK-LPSLLKVAIDVSKG 402
+ ++H +V+ TK P + I+TEFM+ GS+ D+L +G + LP L+ + +++G
Sbjct: 238 KTLQHDKLVKLHAVVTKEP-IYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEG 296
Query: 403 MNYLHQNNIIHRDLKAANLLMDENEVVKVADFGVARVKAQSGVMTAETGTY--RWMAPEV 460
M ++ Q N IHRDL+AAN+L+ + V K+ADFG+ARV + E + +W APE
Sbjct: 297 MAFIEQRNYIHRDLRAANILVSASLVCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEA 356
Query: 461 IEHKPYDHKADVFSFGIVLWELLT-GKLPY 489
I + K+DV+SFGI+L E++T G++PY
Sbjct: 357 INFGSFTIKSDVWSFGILLMEIVTYGRIPY 386
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 143 bits (360), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 78/208 (37%), Positives = 127/208 (61%), Gaps = 15/208 (7%)
Query: 285 DVWEIDPKHLKFGSKVASGSYGDLYRGTYCSQ-DVAIKVLKPERINSDMQKEFAQEVFIM 343
D WEI + LK K+ +G +G+++ TY VA+K +KP ++ + F E +M
Sbjct: 175 DAWEIPRESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGSMSVEA---FLAEANVM 231
Query: 344 RKVRHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFK-LPSLLKVAIDVSKG 402
+ ++H +V+ TK P + I+TEFM+ GS+ D+L +G + LP L+ + +++G
Sbjct: 232 KTLQHDKLVKLHAVVTKEP-IYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEG 290
Query: 403 MNYLHQNNIIHRDLKAANLLMDENEVVKVADFGVARVKAQSGVMTAETGTYRWMAPEVIE 462
M ++ Q N IHRDL+AAN+L+ + V K+ADFG+ARV A+ + +W APE I
Sbjct: 291 MAFIEQRNYIHRDLRAANILVSASLVCKIADFGLARVGAKFPI--------KWTAPEAIN 342
Query: 463 HKPYDHKADVFSFGIVLWELLT-GKLPY 489
+ K+DV+SFGI+L E++T G++PY
Sbjct: 343 FGSFTIKSDVWSFGILLMEIVTYGRIPY 370
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 142 bits (359), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 77/208 (37%), Positives = 128/208 (61%), Gaps = 8/208 (3%)
Query: 287 WEIDPKHLKFGSKVASGSYGDLYRGTYC-SQDVAIKVLKPERINSDMQKEFAQEVFIMRK 345
WEI + +K K+ +G +G+++ G Y S VA+K LKP ++ + F +E +M+
Sbjct: 7 WEIPRESIKLVKKLGAGQFGEVWMGYYNNSTKVAVKTLKPGTMSV---QAFLEEANLMKT 63
Query: 346 VRHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKG-VFKLPSLLKVAIDVSKGMN 404
++H +V+ TK + I+TEFM+ GS+ D+L +G LP L+ + +++GM
Sbjct: 64 LQHDKLVRLYAVVTKEEPIYIITEFMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMA 123
Query: 405 YLHQNNIIHRDLKAANLLMDENEVVKVADFGVARVKAQSGVMTAETGTY--RWMAPEVIE 462
Y+ + N IHRDL+AAN+L+ E+ + K+ADFG+ARV + E + +W APE I
Sbjct: 124 YIERKNYIHRDLRAANVLVSESLMCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAIN 183
Query: 463 HKPYDHKADVFSFGIVLWELLT-GKLPY 489
+ K++V+SFGI+L+E++T GK+PY
Sbjct: 184 FGCFTIKSNVWSFGILLYEIVTYGKIPY 211
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 142 bits (359), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 78/210 (37%), Positives = 127/210 (60%), Gaps = 9/210 (4%)
Query: 285 DVWEIDPKHLKFGSKVASGSYGDLYRGTYCSQ-DVAIKVLKPERINSDMQKEFAQEVFIM 343
D WEI + LK K+ +G +G+++ TY VA+K +KP ++ + F E +M
Sbjct: 8 DAWEIPRESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGSMSVEA---FLAEANVM 64
Query: 344 RKVRHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFK-LPSLLKVAIDVSKG 402
+ ++H +V+ TK P + I+TEFM+ GS+ D+L +G + LP L+ + +++G
Sbjct: 65 KTLQHDKLVKLHAVVTKEP-IYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEG 123
Query: 403 MNYLHQNNIIHRDLKAANLLMDENEVVKVADFGVARVKAQSGVMTAETGTY--RWMAPEV 460
M ++ Q N IHRDL+AAN+L+ + V K+ADFG+ARV + E + +W APE
Sbjct: 124 MAFIEQRNYIHRDLRAANILVSASLVCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEA 183
Query: 461 IEHKPYDHKADVFSFGIVLWELLT-GKLPY 489
I + K+DV+SFGI+L E++T G++PY
Sbjct: 184 INFGSFTIKSDVWSFGILLMEIVTYGRIPY 213
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 140 bits (354), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 84/260 (32%), Positives = 141/260 (54%), Gaps = 21/260 (8%)
Query: 247 KLERQGWPS------HRSSSPTSEPEDTGMKSHPYHLKIPNDGTDVWEIDPKHLKFGSKV 300
+LE +G+PS H S+ + +G+ H +P D W ++ + L G ++
Sbjct: 69 RLEGEGFPSIPLLIDHLLSTQQPLTKKSGVV---LHRAVPKDK---WVLNHEDLVLGEQI 122
Query: 301 ASGSYGDLYRGTYCSQD--VAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQFIGAC 358
G++G+++ G + + VA+K + E + D++ +F QE I+++ H N+V+ IG C
Sbjct: 123 GRGNFGEVFSGRLRADNTLVAVKSCR-ETLPPDLKAKFLQEARILKQYSHPNIVRLIGVC 181
Query: 359 TKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDLKA 418
T+ + IV E + GG +L ++ +LL++ D + GM YL IHRDL A
Sbjct: 182 TQKQPIYIVMELVQGGDFLTFLRTEGARLRVKTLLQMVGDAAAGMEYLESKCCIHRDLAA 241
Query: 419 ANLLMDENEVVKVADFGVARVKAQSGVMTAETGT----YRWMAPEVIEHKPYDHKADVFS 474
N L+ E V+K++DFG++R +A GV A G +W APE + + Y ++DV+S
Sbjct: 242 RNCLVTEKNVLKISDFGMSREEA-DGVXAASGGLRQVPVKWTAPEALNYGRYSSESDVWS 300
Query: 475 FGIVLWELLT-GKLPYEYLT 493
FGI+LWE + G PY L+
Sbjct: 301 FGILLWETFSLGASPYPNLS 320
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 140 bits (354), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 84/260 (32%), Positives = 141/260 (54%), Gaps = 21/260 (8%)
Query: 247 KLERQGWPS------HRSSSPTSEPEDTGMKSHPYHLKIPNDGTDVWEIDPKHLKFGSKV 300
+LE +G+PS H S+ + +G+ H +P D W ++ + L G ++
Sbjct: 69 RLEGEGFPSIPLLIDHLLSTQQPLTKKSGVV---LHRAVPKDK---WVLNHEDLVLGEQI 122
Query: 301 ASGSYGDLYRGTYCSQD--VAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQFIGAC 358
G++G+++ G + + VA+K + E + D++ +F QE I+++ H N+V+ IG C
Sbjct: 123 GRGNFGEVFSGRLRADNTLVAVKSCR-ETLPPDLKAKFLQEARILKQYSHPNIVRLIGVC 181
Query: 359 TKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDLKA 418
T+ + IV E + GG +L ++ +LL++ D + GM YL IHRDL A
Sbjct: 182 TQKQPIYIVMELVQGGDFLTFLRTEGARLRVKTLLQMVGDAAAGMEYLESKCCIHRDLAA 241
Query: 419 ANLLMDENEVVKVADFGVARVKAQSGVMTAETGT----YRWMAPEVIEHKPYDHKADVFS 474
N L+ E V+K++DFG++R +A GV A G +W APE + + Y ++DV+S
Sbjct: 242 RNCLVTEKNVLKISDFGMSREEA-DGVYAASGGLRQVPVKWTAPEALNYGRYSSESDVWS 300
Query: 475 FGIVLWELLT-GKLPYEYLT 493
FGI+LWE + G PY L+
Sbjct: 301 FGILLWETFSLGASPYPNLS 320
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 135 bits (340), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 76/220 (34%), Positives = 125/220 (56%), Gaps = 7/220 (3%)
Query: 288 EIDPKHLKFGSKVASGSYGDLYRGTYCSQ-DVAIKVLKPERINSDMQKEFAQEVFIMRKV 346
E+ + + ++ SG +G + G + Q DVA+K++K ++ D EF QE M K+
Sbjct: 4 ELKREEITLLKELGSGQFGVVKLGKWKGQYDVAVKMIKEGSMSED---EFFQEAQTMMKL 60
Query: 347 RHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYL 406
H +V+F G C+K + IVTE++S G + +YL + LL++ DV +GM +L
Sbjct: 61 SHPKLVKFYGVCSKEYPIYIVTEYISNGCLLNYLRSHGKGLEPSQLLEMCYDVCEGMAFL 120
Query: 407 HQNNIIHRDLKAANLLMDENEVVKVADFGVARVKAQSGVMTAETGTY--RWMAPEVIEHK 464
+ IHRDL A N L+D + VKV+DFG+ R +++ + +W APEV +
Sbjct: 121 ESHQFIHRDLAARNCLVDRDLCVKVSDFGMTRYVLDDQYVSSVGTKFPVKWSAPEVFHYF 180
Query: 465 PYDHKADVFSFGIVLWELLT-GKLPYEYLTPLQAAVGVVQ 503
Y K+DV++FGI++WE+ + GK+PY+ T + + V Q
Sbjct: 181 KYSSKSDVWAFGILMWEVFSLGKMPYDLYTNSEVVLKVSQ 220
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 135 bits (340), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 73/214 (34%), Positives = 128/214 (59%), Gaps = 9/214 (4%)
Query: 285 DVWEIDPKHLKFGSKVASGSYGDLYRGTYCSQ-DVAIKVLKPERINSDMQKEFAQEVFIM 343
D WE+ + LK ++ +G +G+++ G Y VA+K LK ++ D F E +M
Sbjct: 14 DEWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDA---FLAEANLM 70
Query: 344 RKVRHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGV-FKLPSLLKVAIDVSKG 402
++++H+ +V+ T+ P + I+TE+M GS+ D+L G+ + LL +A +++G
Sbjct: 71 KQLQHQRLVRLYAVVTQEP-IYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEG 129
Query: 403 MNYLHQNNIIHRDLKAANLLMDENEVVKVADFGVARVKAQSGVMTAETGTY--RWMAPEV 460
M ++ + N IHRDL+AAN+L+ + K+ADFG+AR+ + E + +W APE
Sbjct: 130 MAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEA 189
Query: 461 IEHKPYDHKADVFSFGIVLWELLT-GKLPYEYLT 493
I + + K+DV+SFGI+L E++T G++PY +T
Sbjct: 190 INYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMT 223
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 135 bits (340), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 73/214 (34%), Positives = 128/214 (59%), Gaps = 9/214 (4%)
Query: 285 DVWEIDPKHLKFGSKVASGSYGDLYRGTYCSQ-DVAIKVLKPERINSDMQKEFAQEVFIM 343
D WE+ + LK ++ +G +G+++ G Y VA+K LK ++ D F E +M
Sbjct: 12 DEWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDA---FLAEANLM 68
Query: 344 RKVRHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGV-FKLPSLLKVAIDVSKG 402
++++H+ +V+ T+ P + I+TE+M GS+ D+L G+ + LL +A +++G
Sbjct: 69 KQLQHQRLVRLYAVVTQEP-IYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEG 127
Query: 403 MNYLHQNNIIHRDLKAANLLMDENEVVKVADFGVARVKAQSGVMTAETGTY--RWMAPEV 460
M ++ + N IHRDL+AAN+L+ + K+ADFG+AR+ + E + +W APE
Sbjct: 128 MAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEA 187
Query: 461 IEHKPYDHKADVFSFGIVLWELLT-GKLPYEYLT 493
I + + K+DV+SFGI+L E++T G++PY +T
Sbjct: 188 INYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMT 221
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 135 bits (340), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 73/214 (34%), Positives = 128/214 (59%), Gaps = 9/214 (4%)
Query: 285 DVWEIDPKHLKFGSKVASGSYGDLYRGTYCSQ-DVAIKVLKPERINSDMQKEFAQEVFIM 343
D WE+ + LK ++ +G +G+++ G Y VA+K LK ++ D F E +M
Sbjct: 15 DEWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDA---FLAEANLM 71
Query: 344 RKVRHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGV-FKLPSLLKVAIDVSKG 402
++++H+ +V+ T+ P + I+TE+M GS+ D+L G+ + LL +A +++G
Sbjct: 72 KQLQHQRLVRLYAVVTQEP-IYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEG 130
Query: 403 MNYLHQNNIIHRDLKAANLLMDENEVVKVADFGVARVKAQSGVMTAETGTY--RWMAPEV 460
M ++ + N IHRDL+AAN+L+ + K+ADFG+AR+ + E + +W APE
Sbjct: 131 MAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEA 190
Query: 461 IEHKPYDHKADVFSFGIVLWELLT-GKLPYEYLT 493
I + + K+DV+SFGI+L E++T G++PY +T
Sbjct: 191 INYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMT 224
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 135 bits (340), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 73/214 (34%), Positives = 128/214 (59%), Gaps = 9/214 (4%)
Query: 285 DVWEIDPKHLKFGSKVASGSYGDLYRGTYCSQ-DVAIKVLKPERINSDMQKEFAQEVFIM 343
D WE+ + LK ++ +G +G+++ G Y VA+K LK ++ D F E +M
Sbjct: 16 DEWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDA---FLAEANLM 72
Query: 344 RKVRHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGV-FKLPSLLKVAIDVSKG 402
++++H+ +V+ T+ P + I+TE+M GS+ D+L G+ + LL +A +++G
Sbjct: 73 KQLQHQRLVRLYAVVTQEP-IYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEG 131
Query: 403 MNYLHQNNIIHRDLKAANLLMDENEVVKVADFGVARVKAQSGVMTAETGTY--RWMAPEV 460
M ++ + N IHRDL+AAN+L+ + K+ADFG+AR+ + E + +W APE
Sbjct: 132 MAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEA 191
Query: 461 IEHKPYDHKADVFSFGIVLWELLT-GKLPYEYLT 493
I + + K+DV+SFGI+L E++T G++PY +T
Sbjct: 192 INYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMT 225
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 135 bits (340), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 73/214 (34%), Positives = 128/214 (59%), Gaps = 9/214 (4%)
Query: 285 DVWEIDPKHLKFGSKVASGSYGDLYRGTYCSQ-DVAIKVLKPERINSDMQKEFAQEVFIM 343
D WE+ + LK ++ +G +G+++ G Y VA+K LK ++ D F E +M
Sbjct: 12 DEWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDA---FLAEANLM 68
Query: 344 RKVRHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGV-FKLPSLLKVAIDVSKG 402
++++H+ +V+ T+ P + I+TE+M GS+ D+L G+ + LL +A +++G
Sbjct: 69 KQLQHQRLVRLYAVVTQEP-IYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEG 127
Query: 403 MNYLHQNNIIHRDLKAANLLMDENEVVKVADFGVARVKAQSGVMTAETGTY--RWMAPEV 460
M ++ + N IHRDL+AAN+L+ + K+ADFG+AR+ + E + +W APE
Sbjct: 128 MAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEA 187
Query: 461 IEHKPYDHKADVFSFGIVLWELLT-GKLPYEYLT 493
I + + K+DV+SFGI+L E++T G++PY +T
Sbjct: 188 INYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMT 221
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 135 bits (340), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 73/214 (34%), Positives = 128/214 (59%), Gaps = 9/214 (4%)
Query: 285 DVWEIDPKHLKFGSKVASGSYGDLYRGTYCSQ-DVAIKVLKPERINSDMQKEFAQEVFIM 343
D WE+ + LK ++ +G +G+++ G Y VA+K LK ++ D F E +M
Sbjct: 11 DEWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDA---FLAEANLM 67
Query: 344 RKVRHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGV-FKLPSLLKVAIDVSKG 402
++++H+ +V+ T+ P + I+TE+M GS+ D+L G+ + LL +A +++G
Sbjct: 68 KQLQHQRLVRLYAVVTQEP-IYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEG 126
Query: 403 MNYLHQNNIIHRDLKAANLLMDENEVVKVADFGVARVKAQSGVMTAETGTY--RWMAPEV 460
M ++ + N IHRDL+AAN+L+ + K+ADFG+AR+ + E + +W APE
Sbjct: 127 MAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEA 186
Query: 461 IEHKPYDHKADVFSFGIVLWELLT-GKLPYEYLT 493
I + + K+DV+SFGI+L E++T G++PY +T
Sbjct: 187 INYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMT 220
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 135 bits (339), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 73/214 (34%), Positives = 128/214 (59%), Gaps = 9/214 (4%)
Query: 285 DVWEIDPKHLKFGSKVASGSYGDLYRGTYCSQ-DVAIKVLKPERINSDMQKEFAQEVFIM 343
D WE+ + LK ++ +G +G+++ G Y VA+K LK ++ D F E +M
Sbjct: 6 DEWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDA---FLAEANLM 62
Query: 344 RKVRHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGV-FKLPSLLKVAIDVSKG 402
++++H+ +V+ T+ P + I+TE+M GS+ D+L G+ + LL +A +++G
Sbjct: 63 KQLQHQRLVRLYAVVTQEP-IYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEG 121
Query: 403 MNYLHQNNIIHRDLKAANLLMDENEVVKVADFGVARVKAQSGVMTAETGTY--RWMAPEV 460
M ++ + N IHRDL+AAN+L+ + K+ADFG+AR+ + E + +W APE
Sbjct: 122 MAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEA 181
Query: 461 IEHKPYDHKADVFSFGIVLWELLT-GKLPYEYLT 493
I + + K+DV+SFGI+L E++T G++PY +T
Sbjct: 182 INYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMT 215
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 135 bits (339), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 73/214 (34%), Positives = 128/214 (59%), Gaps = 9/214 (4%)
Query: 285 DVWEIDPKHLKFGSKVASGSYGDLYRGTYCSQ-DVAIKVLKPERINSDMQKEFAQEVFIM 343
D WE+ + LK ++ +G +G+++ G Y VA+K LK ++ D F E +M
Sbjct: 1 DEWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPD---AFLAEANLM 57
Query: 344 RKVRHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGV-FKLPSLLKVAIDVSKG 402
++++H+ +V+ T+ P + I+TE+M GS+ D+L G+ + LL +A +++G
Sbjct: 58 KQLQHQRLVRLYAVVTQEP-IYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEG 116
Query: 403 MNYLHQNNIIHRDLKAANLLMDENEVVKVADFGVARVKAQSGVMTAETGTY--RWMAPEV 460
M ++ + N IHRDL+AAN+L+ + K+ADFG+AR+ + E + +W APE
Sbjct: 117 MAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEA 176
Query: 461 IEHKPYDHKADVFSFGIVLWELLT-GKLPYEYLT 493
I + + K+DV+SFGI+L E++T G++PY +T
Sbjct: 177 INYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMT 210
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 135 bits (339), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 73/214 (34%), Positives = 128/214 (59%), Gaps = 9/214 (4%)
Query: 285 DVWEIDPKHLKFGSKVASGSYGDLYRGTYCSQ-DVAIKVLKPERINSDMQKEFAQEVFIM 343
D WE+ + LK ++ +G +G+++ G Y VA+K LK ++ D F E +M
Sbjct: 8 DEWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDA---FLAEANLM 64
Query: 344 RKVRHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGV-FKLPSLLKVAIDVSKG 402
++++H+ +V+ T+ P + I+TE+M GS+ D+L G+ + LL +A +++G
Sbjct: 65 KQLQHQRLVRLYAVVTQEP-IYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEG 123
Query: 403 MNYLHQNNIIHRDLKAANLLMDENEVVKVADFGVARVKAQSGVMTAETGTY--RWMAPEV 460
M ++ + N IHRDL+AAN+L+ + K+ADFG+AR+ + E + +W APE
Sbjct: 124 MAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEA 183
Query: 461 IEHKPYDHKADVFSFGIVLWELLT-GKLPYEYLT 493
I + + K+DV+SFGI+L E++T G++PY +T
Sbjct: 184 INYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMT 217
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 135 bits (339), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 73/214 (34%), Positives = 128/214 (59%), Gaps = 9/214 (4%)
Query: 285 DVWEIDPKHLKFGSKVASGSYGDLYRGTYCSQ-DVAIKVLKPERINSDMQKEFAQEVFIM 343
D WE+ + LK ++ +G +G+++ G Y VA+K LK ++ D F E +M
Sbjct: 6 DEWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDA---FLAEANLM 62
Query: 344 RKVRHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGV-FKLPSLLKVAIDVSKG 402
++++H+ +V+ T+ P + I+TE+M GS+ D+L G+ + LL +A +++G
Sbjct: 63 KQLQHQRLVRLYAVVTQEP-IYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEG 121
Query: 403 MNYLHQNNIIHRDLKAANLLMDENEVVKVADFGVARVKAQSGVMTAETGTY--RWMAPEV 460
M ++ + N IHRDL+AAN+L+ + K+ADFG+AR+ + E + +W APE
Sbjct: 122 MAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEA 181
Query: 461 IEHKPYDHKADVFSFGIVLWELLT-GKLPYEYLT 493
I + + K+DV+SFGI+L E++T G++PY +T
Sbjct: 182 INYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMT 215
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 135 bits (339), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 73/214 (34%), Positives = 128/214 (59%), Gaps = 9/214 (4%)
Query: 285 DVWEIDPKHLKFGSKVASGSYGDLYRGTYCSQ-DVAIKVLKPERINSDMQKEFAQEVFIM 343
D WE+ + LK ++ +G +G+++ G Y VA+K LK ++ D F E +M
Sbjct: 7 DEWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDA---FLAEANLM 63
Query: 344 RKVRHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGV-FKLPSLLKVAIDVSKG 402
++++H+ +V+ T+ P + I+TE+M GS+ D+L G+ + LL +A +++G
Sbjct: 64 KQLQHQRLVRLYAVVTQEP-IYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEG 122
Query: 403 MNYLHQNNIIHRDLKAANLLMDENEVVKVADFGVARVKAQSGVMTAETGTY--RWMAPEV 460
M ++ + N IHRDL+AAN+L+ + K+ADFG+AR+ + E + +W APE
Sbjct: 123 MAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEA 182
Query: 461 IEHKPYDHKADVFSFGIVLWELLT-GKLPYEYLT 493
I + + K+DV+SFGI+L E++T G++PY +T
Sbjct: 183 INYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMT 216
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 134 bits (338), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 73/214 (34%), Positives = 128/214 (59%), Gaps = 9/214 (4%)
Query: 285 DVWEIDPKHLKFGSKVASGSYGDLYRGTYCSQ-DVAIKVLKPERINSDMQKEFAQEVFIM 343
D WE+ + LK ++ +G +G+++ G Y VA+K LK ++ D F E +M
Sbjct: 6 DEWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDA---FLAEANLM 62
Query: 344 RKVRHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGV-FKLPSLLKVAIDVSKG 402
++++H+ +V+ T+ P + I+TE+M GS+ D+L G+ + LL +A +++G
Sbjct: 63 KQLQHQRLVRLYAVVTQEP-IYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEG 121
Query: 403 MNYLHQNNIIHRDLKAANLLMDENEVVKVADFGVARVKAQSGVMTAETGTY--RWMAPEV 460
M ++ + N IHRDL+AAN+L+ + K+ADFG+AR+ + E + +W APE
Sbjct: 122 MAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEA 181
Query: 461 IEHKPYDHKADVFSFGIVLWELLT-GKLPYEYLT 493
I + + K+DV+SFGI+L E++T G++PY +T
Sbjct: 182 INYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMT 215
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 134 bits (338), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 73/214 (34%), Positives = 127/214 (59%), Gaps = 9/214 (4%)
Query: 285 DVWEIDPKHLKFGSKVASGSYGDLYRGTYCSQ-DVAIKVLKPERINSDMQKEFAQEVFIM 343
D WE+ + LK ++ +G G+++ G Y VA+K LK ++ D F E +M
Sbjct: 6 DAWEVPRETLKLVERLGAGQAGEVWMGYYNGHTKVAVKSLKQGSMSPDA---FLAEANLM 62
Query: 344 RKVRHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGV-FKLPSLLKVAIDVSKG 402
++++H+ +V+ T+ P + I+TE+M GS+ D+L G+ + LL +A +++G
Sbjct: 63 KQLQHQRLVRLYAVVTQEP-IYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEG 121
Query: 403 MNYLHQNNIIHRDLKAANLLMDENEVVKVADFGVARVKAQSGVMTAETGTY--RWMAPEV 460
M ++ + N IHRDL+AAN+L+ + K+ADFG+AR+ + E + +W APE
Sbjct: 122 MAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDAEXTAREGAKFPIKWTAPEA 181
Query: 461 IEHKPYDHKADVFSFGIVLWELLT-GKLPYEYLT 493
I + + K+DV+SFGI+L E++T G++PY +T
Sbjct: 182 INYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMT 215
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 133 bits (334), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 76/204 (37%), Positives = 124/204 (60%), Gaps = 19/204 (9%)
Query: 297 GSKVASGSYGDLYRGTYCSQDVAIKVLKP--ERINSDMQKEFAQEVFIMRKVRHKNVVQF 354
G+K+ G +G +Y+G + VA+K L + +++++F QE+ +M K +H+N+V+
Sbjct: 36 GNKMGEGGFGVVYKGYVNNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVEL 95
Query: 355 IGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSL-----LKVAIDVSKGMNYLHQN 409
+G + LC+V +M GS+ D L L G P L K+A + G+N+LH+N
Sbjct: 96 LGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGT---PPLSWHMRCKIAQGAANGINFLHEN 152
Query: 410 NIIHRDLKAANLLMDENEVVKVADFGVARVK---AQSGVMTAETGTYRWMAPEVI--EHK 464
+ IHRD+K+AN+L+DE K++DFG+AR AQ+ + + GT +MAPE + E
Sbjct: 153 HHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQTVMXSRIVGTTAYMAPEALRGEIT 212
Query: 465 PYDHKADVFSFGIVLWELLTGKLP 488
P K+D++SFG+VL E++TG LP
Sbjct: 213 P---KSDIYSFGVVLLEIITG-LP 232
>pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer
Length = 319
Score = 132 bits (333), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 74/222 (33%), Positives = 119/222 (53%), Gaps = 23/222 (10%)
Query: 287 WEIDPKHLKFGSKVASGSYGDLYRGTYCSQDVAIKVLKPERINSDMQKEFAQEVFIMRKV 346
W+I + L+ G + G +G +Y G + +VAI+++ ER N D K F +EV R+
Sbjct: 28 WDIPFEQLEIGELIGKGRFGQVYHGRWHG-EVAIRLIDIERDNEDQLKAFKREVMAYRQT 86
Query: 347 RHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYL 406
RH+NVV F+GAC PP L I+T G ++Y + K V + ++A ++ KGM YL
Sbjct: 87 RHENVVLFMGACMSPPHLAIITSLCKGRTLYSVVRDAKIVLDVNKTRQIAQEIVKGMGYL 146
Query: 407 HQNNIIHRDLKAANLLMDENEVVKVADFGVARVKAQSGVMTA---------ETGTYRWMA 457
H I+H+DLK+ N+ D +VV + DFG+ + SGV+ A + G +A
Sbjct: 147 HAKGILHKDLKSKNVFYDNGKVV-ITDFGLFSI---SGVLQAGRREDKLRIQNGWLCHLA 202
Query: 458 PEVI---------EHKPYDHKADVFSFGIVLWELLTGKLPYE 490
PE+I + P+ +DVF+ G + +EL + P++
Sbjct: 203 PEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYELHAREWPFK 244
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 132 bits (332), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 74/201 (36%), Positives = 121/201 (60%), Gaps = 18/201 (8%)
Query: 297 GSKVASGSYGDLYRGTYCSQDVAIKVLKP--ERINSDMQKEFAQEVFIMRKVRHKNVVQF 354
G+K+ G +G +Y+G + VA+K L + +++++F QE+ +M K +H+N+V+
Sbjct: 36 GNKMGEGGFGVVYKGYVNNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVEL 95
Query: 355 IGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSL-----LKVAIDVSKGMNYLHQN 409
+G + LC+V +M GS+ D L L G P L K+A + G+N+LH+N
Sbjct: 96 LGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGT---PPLSWHMRCKIAQGAANGINFLHEN 152
Query: 410 NIIHRDLKAANLLMDENEVVKVADFGVARVK---AQSGVMTAETGTYRWMAPEVI--EHK 464
+ IHRD+K+AN+L+DE K++DFG+AR AQ+ + GT +MAPE + E
Sbjct: 153 HHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQTVMXXRIVGTTAYMAPEALRGEIT 212
Query: 465 PYDHKADVFSFGIVLWELLTG 485
P K+D++SFG+VL E++TG
Sbjct: 213 P---KSDIYSFGVVLLEIITG 230
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 132 bits (331), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 71/212 (33%), Positives = 127/212 (59%), Gaps = 9/212 (4%)
Query: 287 WEIDPKHLKFGSKVASGSYGDLYRGTYCSQ-DVAIKVLKPERINSDMQKEFAQEVFIMRK 345
WE+ + LK ++ +G +G+++ G Y VA+K LK ++ D F E +M++
Sbjct: 4 WEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPD---AFLAEANLMKQ 60
Query: 346 VRHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGV-FKLPSLLKVAIDVSKGMN 404
++H+ +V+ T+ P + I+TE+M GS+ D+L G+ + LL +A +++GM
Sbjct: 61 LQHQRLVRLYAVVTQEP-IYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMA 119
Query: 405 YLHQNNIIHRDLKAANLLMDENEVVKVADFGVARVKAQSGVMTAETGTY--RWMAPEVIE 462
++ + N IHR+L+AAN+L+ + K+ADFG+AR+ + E + +W APE I
Sbjct: 120 FIEERNYIHRNLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAIN 179
Query: 463 HKPYDHKADVFSFGIVLWELLT-GKLPYEYLT 493
+ + K+DV+SFGI+L E++T G++PY +T
Sbjct: 180 YGTFTIKSDVWSFGILLTEIVTHGRIPYPGMT 211
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 130 bits (328), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 74/201 (36%), Positives = 120/201 (59%), Gaps = 18/201 (8%)
Query: 297 GSKVASGSYGDLYRGTYCSQDVAIKVLKP--ERINSDMQKEFAQEVFIMRKVRHKNVVQF 354
G+K+ G +G +Y+G + VA+K L + +++++F QE+ +M K +H+N+V+
Sbjct: 30 GNKMGEGGFGVVYKGYVNNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVEL 89
Query: 355 IGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSL-----LKVAIDVSKGMNYLHQN 409
+G + LC+V +M GS+ D L L G P L K+A + G+N+LH+N
Sbjct: 90 LGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGT---PPLSWHMRCKIAQGAANGINFLHEN 146
Query: 410 NIIHRDLKAANLLMDENEVVKVADFGVARVK---AQSGVMTAETGTYRWMAPEVI--EHK 464
+ IHRD+K+AN+L+DE K++DFG+AR AQ + GT +MAPE + E
Sbjct: 147 HHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQXVMXXRIVGTTAYMAPEALRGEIT 206
Query: 465 PYDHKADVFSFGIVLWELLTG 485
P K+D++SFG+VL E++TG
Sbjct: 207 P---KSDIYSFGVVLLEIITG 224
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 129 bits (324), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 76/208 (36%), Positives = 118/208 (56%), Gaps = 14/208 (6%)
Query: 289 IDPKHLKFGSKVASGSYGDLYRGTYCSQDVAIKVLKPERINSDMQKEFAQEVFIMRKVRH 348
ID K ++ V G++G + + + ++DVAIK ++ E +K F E+ + +V H
Sbjct: 6 IDYKEIEVEEVVGRGAFGVVCKAKWRAKDVAIKQIESE----SERKAFIVELRQLSRVNH 61
Query: 349 KNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGV--FKLPSLLKVAIDVSKGMNYL 406
N+V+ GAC P +C+V E+ GGS+Y+ LH + + + + + S+G+ YL
Sbjct: 62 PNIVKLYGACLNP--VCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYL 119
Query: 407 HQ---NNIIHRDLKAANLLM-DENEVVKVADFGVARVKAQSGVMTAETGTYRWMAPEVIE 462
H +IHRDLK NLL+ V+K+ DFG A Q+ MT G+ WMAPEV E
Sbjct: 120 HSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTA-CDIQTH-MTNNKGSAAWMAPEVFE 177
Query: 463 HKPYDHKADVFSFGIVLWELLTGKLPYE 490
Y K DVFS+GI+LWE++T + P++
Sbjct: 178 GSNYSEKCDVFSWGIILWEVITRRKPFD 205
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 129 bits (323), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 76/208 (36%), Positives = 118/208 (56%), Gaps = 14/208 (6%)
Query: 289 IDPKHLKFGSKVASGSYGDLYRGTYCSQDVAIKVLKPERINSDMQKEFAQEVFIMRKVRH 348
ID K ++ V G++G + + + ++DVAIK ++ E +K F E+ + +V H
Sbjct: 5 IDYKEIEVEEVVGRGAFGVVCKAKWRAKDVAIKQIESE----SERKAFIVELRQLSRVNH 60
Query: 349 KNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGV--FKLPSLLKVAIDVSKGMNYL 406
N+V+ GAC P +C+V E+ GGS+Y+ LH + + + + + S+G+ YL
Sbjct: 61 PNIVKLYGACLNP--VCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYL 118
Query: 407 HQ---NNIIHRDLKAANLLM-DENEVVKVADFGVARVKAQSGVMTAETGTYRWMAPEVIE 462
H +IHRDLK NLL+ V+K+ DFG A Q+ MT G+ WMAPEV E
Sbjct: 119 HSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTA-CDIQTH-MTNNKGSAAWMAPEVFE 176
Query: 463 HKPYDHKADVFSFGIVLWELLTGKLPYE 490
Y K DVFS+GI+LWE++T + P++
Sbjct: 177 GSNYSEKCDVFSWGIILWEVITRRKPFD 204
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 128 bits (322), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 74/212 (34%), Positives = 118/212 (55%), Gaps = 12/212 (5%)
Query: 289 IDPKHLKFGSKVASGSYGDLYRGTY-----CSQDVAIKVLKPERINS-DMQKEFAQEVFI 342
I K L+ K+ GS+G + RG + + VA+K LKP+ ++ + +F +EV
Sbjct: 9 IGEKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNA 68
Query: 343 MRKVRHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKG 402
M + H+N+++ G PP + +VTE GS+ D L K +G F L +L + A+ V++G
Sbjct: 69 MHSLDHRNLIRLYGVVLTPP-MKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEG 127
Query: 403 MNYLHQNNIIHRDLKAANLLMDENEVVKVADFGVARVKAQSG---VMTAETGT-YRWMAP 458
M YL IHRDL A NLL+ ++VK+ DFG+ R Q+ VM + W AP
Sbjct: 128 MGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAP 187
Query: 459 EVIEHKPYDHKADVFSFGIVLWELLT-GKLPY 489
E ++ + + H +D + FG+ LWE+ T G+ P+
Sbjct: 188 ESLKTRTFSHASDTWMFGVTLWEMFTYGQEPW 219
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 128 bits (321), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 74/212 (34%), Positives = 118/212 (55%), Gaps = 12/212 (5%)
Query: 289 IDPKHLKFGSKVASGSYGDLYRGTY-----CSQDVAIKVLKPERINS-DMQKEFAQEVFI 342
I K L+ K+ GS+G + RG + + VA+K LKP+ ++ + +F +EV
Sbjct: 9 IGEKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNA 68
Query: 343 MRKVRHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKG 402
M + H+N+++ G PP + +VTE GS+ D L K +G F L +L + A+ V++G
Sbjct: 69 MHSLDHRNLIRLYGVVLTPP-MKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEG 127
Query: 403 MNYLHQNNIIHRDLKAANLLMDENEVVKVADFGVARVKAQSG---VMTAETGT-YRWMAP 458
M YL IHRDL A NLL+ ++VK+ DFG+ R Q+ VM + W AP
Sbjct: 128 MGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAP 187
Query: 459 EVIEHKPYDHKADVFSFGIVLWELLT-GKLPY 489
E ++ + + H +D + FG+ LWE+ T G+ P+
Sbjct: 188 ESLKTRTFSHASDTWMFGVTLWEMFTYGQEPW 219
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 128 bits (321), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 74/212 (34%), Positives = 118/212 (55%), Gaps = 12/212 (5%)
Query: 289 IDPKHLKFGSKVASGSYGDLYRGTY-----CSQDVAIKVLKPERINS-DMQKEFAQEVFI 342
I K L+ K+ GS+G + RG + + VA+K LKP+ ++ + +F +EV
Sbjct: 15 IGEKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNA 74
Query: 343 MRKVRHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKG 402
M + H+N+++ G PP + +VTE GS+ D L K +G F L +L + A+ V++G
Sbjct: 75 MHSLDHRNLIRLYGVVLTPP-MKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEG 133
Query: 403 MNYLHQNNIIHRDLKAANLLMDENEVVKVADFGVARVKAQS---GVMTAETGT-YRWMAP 458
M YL IHRDL A NLL+ ++VK+ DFG+ R Q+ VM + W AP
Sbjct: 134 MGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRKVPFAWCAP 193
Query: 459 EVIEHKPYDHKADVFSFGIVLWELLT-GKLPY 489
E ++ + + H +D + FG+ LWE+ T G+ P+
Sbjct: 194 ESLKTRTFSHASDTWMFGVTLWEMFTYGQEPW 225
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 128 bits (321), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 74/212 (34%), Positives = 118/212 (55%), Gaps = 12/212 (5%)
Query: 289 IDPKHLKFGSKVASGSYGDLYRGTY-----CSQDVAIKVLKPERINS-DMQKEFAQEVFI 342
I K L+ K+ GS+G + RG + + VA+K LKP+ ++ + +F +EV
Sbjct: 15 IGEKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNA 74
Query: 343 MRKVRHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKG 402
M + H+N+++ G PP + +VTE GS+ D L K +G F L +L + A+ V++G
Sbjct: 75 MHSLDHRNLIRLYGVVLTPP-MKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEG 133
Query: 403 MNYLHQNNIIHRDLKAANLLMDENEVVKVADFGVARVKAQSG---VMTAETGT-YRWMAP 458
M YL IHRDL A NLL+ ++VK+ DFG+ R Q+ VM + W AP
Sbjct: 134 MGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAP 193
Query: 459 EVIEHKPYDHKADVFSFGIVLWELLT-GKLPY 489
E ++ + + H +D + FG+ LWE+ T G+ P+
Sbjct: 194 ESLKTRTFSHASDTWMFGVTLWEMFTYGQEPW 225
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 128 bits (321), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 74/212 (34%), Positives = 118/212 (55%), Gaps = 12/212 (5%)
Query: 289 IDPKHLKFGSKVASGSYGDLYRGTY-----CSQDVAIKVLKPERINS-DMQKEFAQEVFI 342
I K L+ K+ GS+G + RG + + VA+K LKP+ ++ + +F +EV
Sbjct: 5 IGEKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNA 64
Query: 343 MRKVRHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKG 402
M + H+N+++ G PP + +VTE GS+ D L K +G F L +L + A+ V++G
Sbjct: 65 MHSLDHRNLIRLYGVVLTPP-MKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEG 123
Query: 403 MNYLHQNNIIHRDLKAANLLMDENEVVKVADFGVARVKAQSG---VMTAETGT-YRWMAP 458
M YL IHRDL A NLL+ ++VK+ DFG+ R Q+ VM + W AP
Sbjct: 124 MGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRKVPFAWCAP 183
Query: 459 EVIEHKPYDHKADVFSFGIVLWELLT-GKLPY 489
E ++ + + H +D + FG+ LWE+ T G+ P+
Sbjct: 184 ESLKTRTFSHASDTWMFGVTLWEMFTYGQEPW 215
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 128 bits (321), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 74/212 (34%), Positives = 118/212 (55%), Gaps = 12/212 (5%)
Query: 289 IDPKHLKFGSKVASGSYGDLYRGTY-----CSQDVAIKVLKPERINS-DMQKEFAQEVFI 342
I K L+ K+ GS+G + RG + + VA+K LKP+ ++ + +F +EV
Sbjct: 5 IGEKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNA 64
Query: 343 MRKVRHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKG 402
M + H+N+++ G PP + +VTE GS+ D L K +G F L +L + A+ V++G
Sbjct: 65 MHSLDHRNLIRLYGVVLTPP-MKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEG 123
Query: 403 MNYLHQNNIIHRDLKAANLLMDENEVVKVADFGVARVKAQSG---VMTAETGT-YRWMAP 458
M YL IHRDL A NLL+ ++VK+ DFG+ R Q+ VM + W AP
Sbjct: 124 MGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAP 183
Query: 459 EVIEHKPYDHKADVFSFGIVLWELLT-GKLPY 489
E ++ + + H +D + FG+ LWE+ T G+ P+
Sbjct: 184 ESLKTRTFSHASDTWMFGVTLWEMFTYGQEPW 215
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 127 bits (320), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 74/212 (34%), Positives = 118/212 (55%), Gaps = 12/212 (5%)
Query: 289 IDPKHLKFGSKVASGSYGDLYRGTY-----CSQDVAIKVLKPERINS-DMQKEFAQEVFI 342
I K L+ K+ GS+G + RG + + VA+K LKP+ ++ + +F +EV
Sbjct: 5 IGEKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNA 64
Query: 343 MRKVRHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKG 402
M + H+N+++ G PP + +VTE GS+ D L K +G F L +L + A+ V++G
Sbjct: 65 MHSLDHRNLIRLYGVVLTPP-MKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEG 123
Query: 403 MNYLHQNNIIHRDLKAANLLMDENEVVKVADFGVARVKAQSG---VMTAETGT-YRWMAP 458
M YL IHRDL A NLL+ ++VK+ DFG+ R Q+ VM + W AP
Sbjct: 124 MGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAP 183
Query: 459 EVIEHKPYDHKADVFSFGIVLWELLT-GKLPY 489
E ++ + + H +D + FG+ LWE+ T G+ P+
Sbjct: 184 ESLKTRTFSHASDTWMFGVTLWEMFTYGQEPW 215
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 127 bits (320), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 78/256 (30%), Positives = 128/256 (50%), Gaps = 28/256 (10%)
Query: 288 EIDPKHLKFGSKVASGSYGDLYRGTYCSQD------VAIKVLKPERINSDMQKEFAQEVF 341
EI P + + +G +G++Y+G + VAIK LK + +F E
Sbjct: 40 EIHPSCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAG-YTEKQRVDFLGEAG 98
Query: 342 IMRKVRHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSK 401
IM + H N+++ G +K + I+TE+M G++ +L + G F + L+ + ++
Sbjct: 99 IMGQFSHHNIIRLEGVISKYKPMMIITEYMENGALDKFLREKDGEFSVLQLVGMLRGIAA 158
Query: 402 GMNYLHQNNIIHRDLKAANLLMDENEVVKVADFGVARVKAQSGVMTAETGT----YRWMA 457
GM YL N +HRDL A N+L++ N V KV+DFG++RV T T RW A
Sbjct: 159 GMKYLANMNYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEATYTTSGGKIPIRWTA 218
Query: 458 PEVIEHKPYDHKADVFSFGIVLWELLT-GKLPYEYL----------------TPLQAAVG 500
PE I ++ + +DV+SFGIV+WE++T G+ PY L TP+
Sbjct: 219 PEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWELSNHEVMKAINDGFRLPTPMDCPSA 278
Query: 501 VVQKVHHSFLEQRLRK 516
+ Q + + ++R R+
Sbjct: 279 IYQLMMQCWQQERARR 294
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 127 bits (319), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 78/234 (33%), Positives = 123/234 (52%), Gaps = 19/234 (8%)
Query: 287 WEIDPKHLKFGSKVASGSYGDLYRGTYCS---QDVAIKVLKPERINSDMQKEFAQEVFIM 343
W I+ + + SG+ + + YC+ + VAIK + E+ + M E +E+ M
Sbjct: 10 WSINRDDYELQEVIGSGATA-VVQAAYCAPKKEKVAIKRINLEKCQTSMD-ELLKEIQAM 67
Query: 344 RKVRHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKL-------KGVFKLPSLLKVA 396
+ H N+V + + L +V + +SGGSV D + + GV ++ +
Sbjct: 68 SQCHHPNIVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATIL 127
Query: 397 IDVSKGMNYLHQNNIIHRDLKAANLLMDENEVVKVADFGVARVKAQSGVMTAE------T 450
+V +G+ YLH+N IHRD+KA N+L+ E+ V++ADFGV+ A G +T
Sbjct: 128 REVLEGLEYLHKNGQIHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFV 187
Query: 451 GTYRWMAPEVIEH-KPYDHKADVFSFGIVLWELLTGKLPYEYLTPLQAAVGVVQ 503
GT WMAPEV+E + YD KAD++SFGI EL TG PY P++ + +Q
Sbjct: 188 GTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPMKVLMLTLQ 241
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 127 bits (319), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 74/208 (35%), Positives = 112/208 (53%), Gaps = 15/208 (7%)
Query: 291 PKHLKFGSKVASGSYGDLYRGTYCSQDVAIKVLKPERINSDMQKEFAQEVFIMRKVRHKN 350
P L G + G +G + T+ + + + R + + Q+ F +EV +MR + H N
Sbjct: 9 PSDLIHGEVLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPN 68
Query: 351 VVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNN 410
V++FIG K L +TE++ GG++ + + + + A D++ GM YLH N
Sbjct: 69 VLKFIGVLYKDKRLNFITEYIKGGTLRGIIKSMDSQYPWSQRVSFAKDIASGMAYLHSMN 128
Query: 411 IIHRDLKAANLLMDENEVVKVADFGVARV----KAQ-SGVMTAE----------TGTYRW 455
IIHRDL + N L+ EN+ V VADFG+AR+ K Q G+ + + G W
Sbjct: 129 IIHRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQPEGLRSLKKPDRKKRYTVVGNPYW 188
Query: 456 MAPEVIEHKPYDHKADVFSFGIVLWELL 483
MAPE+I + YD K DVFSFGIVL E++
Sbjct: 189 MAPEMINGRSYDEKVDVFSFGIVLCEII 216
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 127 bits (318), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 78/234 (33%), Positives = 123/234 (52%), Gaps = 19/234 (8%)
Query: 287 WEIDPKHLKFGSKVASGSYGDLYRGTYCS---QDVAIKVLKPERINSDMQKEFAQEVFIM 343
W I+ + + SG+ + + YC+ + VAIK + E+ + M E +E+ M
Sbjct: 5 WSINRDDYELQEVIGSGATA-VVQAAYCAPKKEKVAIKRINLEKCQTSMD-ELLKEIQAM 62
Query: 344 RKVRHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKL-------KGVFKLPSLLKVA 396
+ H N+V + + L +V + +SGGSV D + + GV ++ +
Sbjct: 63 SQCHHPNIVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATIL 122
Query: 397 IDVSKGMNYLHQNNIIHRDLKAANLLMDENEVVKVADFGVARVKAQSGVMTAE------T 450
+V +G+ YLH+N IHRD+KA N+L+ E+ V++ADFGV+ A G +T
Sbjct: 123 REVLEGLEYLHKNGQIHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFV 182
Query: 451 GTYRWMAPEVIEH-KPYDHKADVFSFGIVLWELLTGKLPYEYLTPLQAAVGVVQ 503
GT WMAPEV+E + YD KAD++SFGI EL TG PY P++ + +Q
Sbjct: 183 GTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPMKVLMLTLQ 236
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 126 bits (316), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 81/289 (28%), Positives = 142/289 (49%), Gaps = 30/289 (10%)
Query: 225 VVDGWPYEETEQLRAALEKEVLKLERQGWPSHRSSSPTSEPEDTGMKSHPYHLKIPNDGT 284
++DG+ + A + +++ +++G + S + E G++SH + +D
Sbjct: 313 LIDGY----CRLVNGATQSFIIRPQKEGERALPSIPKLANNEKQGVRSHTVSVSETDDYA 368
Query: 285 DV--------------WEIDPKHLKFGSKVASGSYGDLYRGTYCSQD-----VAIKVLKP 325
++ +EI + ++ G + G +GD+++G Y S + VAIK K
Sbjct: 369 EIIDEEDTYTMPSTRDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCK- 427
Query: 326 ERINSDMQKE-FAQEVFIMRKVRHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLK 384
SD +E F QE MR+ H ++V+ IG T+ P + I+ E + G + +L K
Sbjct: 428 -NCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITENP-VWIIMELCTLGELRSFLQVRK 485
Query: 385 GVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDLKAANLLMDENEVVKVADFGVARVKAQSG 444
L SL+ A +S + YL +HRD+ A N+L+ N+ VK+ DFG++R S
Sbjct: 486 FSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDST 545
Query: 445 VMTAETGTY--RWMAPEVIEHKPYDHKADVFSFGIVLWELLT-GKLPYE 490
A G +WMAPE I + + +DV+ FG+ +WE+L G P++
Sbjct: 546 YYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQ 594
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 125 bits (314), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 80/241 (33%), Positives = 126/241 (52%), Gaps = 17/241 (7%)
Query: 269 GMKSH--PYHLKIPNDGTDVW--EIDPKHLKFGSKVASGSYGDLYRGTYCSQD-----VA 319
GMK P+ + PN+ + EID +K + +G +G++ G VA
Sbjct: 6 GMKIFIDPFTFEDPNEAVREFAKEIDISCVKIEQVIGAGEFGEVCSGHLKLPGKREIFVA 65
Query: 320 IKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDY 379
IK LK +++F E IM + H NV+ G TK + I+TEFM GS+ +
Sbjct: 66 IKTLK-SGYTEKQRRDFLSEASIMGQFDHPNVIHLEGVVTKSTPVMIITEFMENGSLDSF 124
Query: 380 LHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDLKAANLLMDENEVVKVADFGVARV 439
L + G F + L+ + ++ GM YL N +HRDL A N+L++ N V KV+DFG++R
Sbjct: 125 LRQNDGQFTVIQLVGMLRGIAAGMKYLADMNYVHRDLAARNILVNSNLVCKVSDFGLSRF 184
Query: 440 ---KAQSGVMTAETGT---YRWMAPEVIEHKPYDHKADVFSFGIVLWELLT-GKLPYEYL 492
T+ G RW APE I+++ + +DV+S+GIV+WE+++ G+ PY +
Sbjct: 185 LEDDTSDPTYTSALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERPYWDM 244
Query: 493 T 493
T
Sbjct: 245 T 245
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 125 bits (313), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 80/270 (29%), Positives = 133/270 (49%), Gaps = 42/270 (15%)
Query: 254 PSHRSSSPTSEPEDTGMKSHPYHLKIPNDGTDVWEIDPKHLKFGSKVASGSYGDLYRGTY 313
P R ++ S DT M + ++P D WE L G + G +G +
Sbjct: 45 PLVRITTRLSSTADTPMLAGVSEYELPEDPK--WEFPRDKLTLGKPLGEGCFGQVVMAEA 102
Query: 314 CSQD---------VAIKVLKPERINSDMQKEFAQEVFIMRKV-RHKNVVQFIGACTKPPS 363
D VA+K+LK + D+ + E+ +M+ + +HKN++ +GACT+
Sbjct: 103 VGIDKDKPKEAVTVAVKMLKDDATEKDLS-DLVSEMEMMKMIGKHKNIINLLGACTQDGP 161
Query: 364 LCIVTEFMSGGSVYDYLHKLK--------GVFKLPS-------LLKVAIDVSKGMNYLHQ 408
L ++ E+ S G++ +YL + + ++P L+ +++GM YL
Sbjct: 162 LYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLAS 221
Query: 409 NNIIHRDLKAANLLMDENEVVKVADFGVAR--------VKAQSGVMTAETGTYRWMAPEV 460
IHRDL A N+L+ EN V+K+ADFG+AR K +G + +WMAPE
Sbjct: 222 QKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPV-----KWMAPEA 276
Query: 461 IEHKPYDHKADVFSFGIVLWELLT-GKLPY 489
+ + Y H++DV+SFG+++WE+ T G PY
Sbjct: 277 LFDRVYTHQSDVWSFGVLMWEIFTLGGSPY 306
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 124 bits (311), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 70/207 (33%), Positives = 116/207 (56%), Gaps = 12/207 (5%)
Query: 294 LKFGSKVASGSYGDLYRGTYCSQD------VAIKVLKPERINSDMQKEFAQEVFIMRKVR 347
LK + SG++G +Y+G + + VAIK+L E EF E IM +
Sbjct: 17 LKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILN-ETTGPKANVEFMDEALIMASMD 75
Query: 348 HKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLH 407
H ++V+ +G C P ++ +VT+ M G + +Y+H+ K LL + ++KGM YL
Sbjct: 76 HPHLVRLLGVCLSP-TIQLVTQLMPHGCLLEYVHEHKDNIGSQLLLNWCVQIAKGMMYLE 134
Query: 408 QNNIIHRDLKAANLLMDENEVVKVADFGVAR-VKAQSGVMTAETGTY--RWMAPEVIEHK 464
+ ++HRDL A N+L+ VK+ DFG+AR ++ A+ G +WMA E I ++
Sbjct: 135 ERRLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMPIKWMALECIHYR 194
Query: 465 PYDHKADVFSFGIVLWELLT-GKLPYE 490
+ H++DV+S+G+ +WEL+T G PY+
Sbjct: 195 KFTHQSDVWSYGVTIWELMTFGGKPYD 221
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 124 bits (311), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 70/207 (33%), Positives = 116/207 (56%), Gaps = 12/207 (5%)
Query: 294 LKFGSKVASGSYGDLYRGTYCSQD------VAIKVLKPERINSDMQKEFAQEVFIMRKVR 347
LK + SG++G +Y+G + + VAIK+L E EF E IM +
Sbjct: 40 LKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILN-ETTGPKANVEFMDEALIMASMD 98
Query: 348 HKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLH 407
H ++V+ +G C P ++ +VT+ M G + +Y+H+ K LL + ++KGM YL
Sbjct: 99 HPHLVRLLGVCLSP-TIQLVTQLMPHGCLLEYVHEHKDNIGSQLLLNWCVQIAKGMMYLE 157
Query: 408 QNNIIHRDLKAANLLMDENEVVKVADFGVAR-VKAQSGVMTAETGTY--RWMAPEVIEHK 464
+ ++HRDL A N+L+ VK+ DFG+AR ++ A+ G +WMA E I ++
Sbjct: 158 ERRLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMPIKWMALECIHYR 217
Query: 465 PYDHKADVFSFGIVLWELLT-GKLPYE 490
+ H++DV+S+G+ +WEL+T G PY+
Sbjct: 218 KFTHQSDVWSYGVTIWELMTFGGKPYD 244
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 124 bits (311), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 70/214 (32%), Positives = 116/214 (54%), Gaps = 13/214 (6%)
Query: 288 EIDPKHLKFGSKVASGSYGDLYRGTYCSQD-----VAIKVLKPERINSDMQKEFAQEVFI 342
EID ++K + +G +G++ RG + VAIK LK ++EF E I
Sbjct: 12 EIDVSYVKIEEVIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGG-YTERQRREFLSEASI 70
Query: 343 MRKVRHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKG 402
M + H N+++ G T + I+TEFM G++ +L G F + L+ + ++ G
Sbjct: 71 MGQFEHPNIIRLEGVVTNSMPVMILTEFMENGALDSFLRLNDGQFTVIQLVGMLRGIASG 130
Query: 403 MNYLHQNNIIHRDLKAANLLMDENEVVKVADFGVARVKAQSGVMTAETGTY------RWM 456
M YL + + +HRDL A N+L++ N V KV+DFG++R ++ ET + RW
Sbjct: 131 MRYLAEMSYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTETSSLGGKIPIRWT 190
Query: 457 APEVIEHKPYDHKADVFSFGIVLWELLT-GKLPY 489
APE I + + +D +S+GIV+WE+++ G+ PY
Sbjct: 191 APEAIAFRKFTSASDAWSYGIVMWEVMSFGERPY 224
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 123 bits (309), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 71/213 (33%), Positives = 113/213 (53%), Gaps = 12/213 (5%)
Query: 287 WEIDPKHLKFGSKVASGSYGDLYRGTYCSQD-----VAIKVLKPERINSDMQKE-FAQEV 340
+EI + ++ G + G +GD+++G Y S + VAIK K SD +E F QE
Sbjct: 5 YEIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCK--NCTSDSVREKFLQEA 62
Query: 341 FIMRKVRHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVS 400
MR+ H ++V+ IG T+ P + I+ E + G + +L K L SL+ A +S
Sbjct: 63 LTMRQFDHPHIVKLIGVITENP-VWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLS 121
Query: 401 KGMNYLHQNNIIHRDLKAANLLMDENEVVKVADFGVARVKAQSGVMTAETGTY--RWMAP 458
+ YL +HRD+ A N+L+ N+ VK+ DFG++R S A G +WMAP
Sbjct: 122 TALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTXXKASKGKLPIKWMAP 181
Query: 459 EVIEHKPYDHKADVFSFGIVLWELLT-GKLPYE 490
E I + + +DV+ FG+ +WE+L G P++
Sbjct: 182 ESINFRRFTSASDVWMFGVCMWEILMHGVKPFQ 214
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 123 bits (309), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 80/289 (27%), Positives = 141/289 (48%), Gaps = 30/289 (10%)
Query: 225 VVDGWPYEETEQLRAALEKEVLKLERQGWPSHRSSSPTSEPEDTGMKSHPYHLKIPNDGT 284
++DG+ + A + +++ +++G + S + E G++SH + +D
Sbjct: 313 LIDGY----CRLVNGATQSFIIRPQKEGERALPSIPKLANNEKQGVRSHTVSVSETDDYA 368
Query: 285 DV--------------WEIDPKHLKFGSKVASGSYGDLYRGTYCSQD-----VAIKVLKP 325
++ +EI + ++ G + G +GD+++G Y S + VAIK K
Sbjct: 369 EIIDEEDTYTMPSTRDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCK- 427
Query: 326 ERINSDMQKE-FAQEVFIMRKVRHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLK 384
SD +E F QE MR+ H ++V+ IG T+ P + I+ E + G + +L K
Sbjct: 428 -NCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITENP-VWIIMELCTLGELRSFLQVRK 485
Query: 385 GVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDLKAANLLMDENEVVKVADFGVARVKAQSG 444
L SL+ A +S + YL +HRD+ A N+L+ + VK+ DFG++R S
Sbjct: 486 FSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSATDCVKLGDFGLSRYMEDST 545
Query: 445 VMTAETGTY--RWMAPEVIEHKPYDHKADVFSFGIVLWELLT-GKLPYE 490
A G +WMAPE I + + +DV+ FG+ +WE+L G P++
Sbjct: 546 YYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQ 594
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 123 bits (309), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 71/213 (33%), Positives = 113/213 (53%), Gaps = 12/213 (5%)
Query: 287 WEIDPKHLKFGSKVASGSYGDLYRGTYCSQD-----VAIKVLKPERINSDMQKE-FAQEV 340
+EI + ++ G + G +GD+++G Y S + VAIK K SD +E F QE
Sbjct: 7 YEIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCK--NCTSDSVREKFLQEA 64
Query: 341 FIMRKVRHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVS 400
MR+ H ++V+ IG T+ P + I+ E + G + +L K L SL+ A +S
Sbjct: 65 LTMRQFDHPHIVKLIGVITENP-VWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLS 123
Query: 401 KGMNYLHQNNIIHRDLKAANLLMDENEVVKVADFGVARVKAQSGVMTAETGTY--RWMAP 458
+ YL +HRD+ A N+L+ N+ VK+ DFG++R S A G +WMAP
Sbjct: 124 TALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAP 183
Query: 459 EVIEHKPYDHKADVFSFGIVLWELLT-GKLPYE 490
E I + + +DV+ FG+ +WE+L G P++
Sbjct: 184 ESINFRRFTSASDVWMFGVCMWEILMHGVKPFQ 216
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 123 bits (309), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 71/213 (33%), Positives = 113/213 (53%), Gaps = 12/213 (5%)
Query: 287 WEIDPKHLKFGSKVASGSYGDLYRGTYCSQD-----VAIKVLKPERINSDMQKE-FAQEV 340
+EI + ++ G + G +GD+++G Y S + VAIK K SD +E F QE
Sbjct: 33 YEIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCK--NCTSDSVREKFLQEA 90
Query: 341 FIMRKVRHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVS 400
MR+ H ++V+ IG T+ P + I+ E + G + +L K L SL+ A +S
Sbjct: 91 LTMRQFDHPHIVKLIGVITENP-VWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLS 149
Query: 401 KGMNYLHQNNIIHRDLKAANLLMDENEVVKVADFGVARVKAQSGVMTAETGTY--RWMAP 458
+ YL +HRD+ A N+L+ N+ VK+ DFG++R S A G +WMAP
Sbjct: 150 TALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAP 209
Query: 459 EVIEHKPYDHKADVFSFGIVLWELLT-GKLPYE 490
E I + + +DV+ FG+ +WE+L G P++
Sbjct: 210 ESINFRRFTSASDVWMFGVCMWEILMHGVKPFQ 242
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 123 bits (309), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 71/213 (33%), Positives = 113/213 (53%), Gaps = 12/213 (5%)
Query: 287 WEIDPKHLKFGSKVASGSYGDLYRGTYCSQD-----VAIKVLKPERINSDMQKE-FAQEV 340
+EI + ++ G + G +GD+++G Y S + VAIK K SD +E F QE
Sbjct: 8 YEIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCK--NCTSDSVREKFLQEA 65
Query: 341 FIMRKVRHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVS 400
MR+ H ++V+ IG T+ P + I+ E + G + +L K L SL+ A +S
Sbjct: 66 LTMRQFDHPHIVKLIGVITENP-VWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLS 124
Query: 401 KGMNYLHQNNIIHRDLKAANLLMDENEVVKVADFGVARVKAQSGVMTAETGTY--RWMAP 458
+ YL +HRD+ A N+L+ N+ VK+ DFG++R S A G +WMAP
Sbjct: 125 TALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAP 184
Query: 459 EVIEHKPYDHKADVFSFGIVLWELLT-GKLPYE 490
E I + + +DV+ FG+ +WE+L G P++
Sbjct: 185 ESINFRRFTSASDVWMFGVCMWEILMHGVKPFQ 217
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 123 bits (308), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 71/213 (33%), Positives = 113/213 (53%), Gaps = 12/213 (5%)
Query: 287 WEIDPKHLKFGSKVASGSYGDLYRGTYCSQD-----VAIKVLKPERINSDMQKE-FAQEV 340
+EI + ++ G + G +GD+++G Y S + VAIK K SD +E F QE
Sbjct: 10 YEIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCK--NCTSDSVREKFLQEA 67
Query: 341 FIMRKVRHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVS 400
MR+ H ++V+ IG T+ P + I+ E + G + +L K L SL+ A +S
Sbjct: 68 LTMRQFDHPHIVKLIGVITENP-VWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLS 126
Query: 401 KGMNYLHQNNIIHRDLKAANLLMDENEVVKVADFGVARVKAQSGVMTAETGTY--RWMAP 458
+ YL +HRD+ A N+L+ N+ VK+ DFG++R S A G +WMAP
Sbjct: 127 TALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAP 186
Query: 459 EVIEHKPYDHKADVFSFGIVLWELLT-GKLPYE 490
E I + + +DV+ FG+ +WE+L G P++
Sbjct: 187 ESINFRRFTSASDVWMFGVCMWEILMHGVKPFQ 219
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 123 bits (308), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 71/213 (33%), Positives = 113/213 (53%), Gaps = 12/213 (5%)
Query: 287 WEIDPKHLKFGSKVASGSYGDLYRGTYCSQD-----VAIKVLKPERINSDMQKE-FAQEV 340
+EI + ++ G + G +GD+++G Y S + VAIK K SD +E F QE
Sbjct: 2 YEIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCK--NCTSDSVREKFLQEA 59
Query: 341 FIMRKVRHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVS 400
MR+ H ++V+ IG T+ P + I+ E + G + +L K L SL+ A +S
Sbjct: 60 LTMRQFDHPHIVKLIGVITENP-VWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLS 118
Query: 401 KGMNYLHQNNIIHRDLKAANLLMDENEVVKVADFGVARVKAQSGVMTAETGTY--RWMAP 458
+ YL +HRD+ A N+L+ N+ VK+ DFG++R S A G +WMAP
Sbjct: 119 TALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAP 178
Query: 459 EVIEHKPYDHKADVFSFGIVLWELLT-GKLPYE 490
E I + + +DV+ FG+ +WE+L G P++
Sbjct: 179 ESINFRRFTSASDVWMFGVCMWEILMHGVKPFQ 211
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 123 bits (308), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 71/213 (33%), Positives = 113/213 (53%), Gaps = 12/213 (5%)
Query: 287 WEIDPKHLKFGSKVASGSYGDLYRGTYCSQD-----VAIKVLKPERINSDMQKE-FAQEV 340
+EI + ++ G + G +GD+++G Y S + VAIK K SD +E F QE
Sbjct: 5 YEIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCK--NCTSDSVREKFLQEA 62
Query: 341 FIMRKVRHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVS 400
MR+ H ++V+ IG T+ P + I+ E + G + +L K L SL+ A +S
Sbjct: 63 LTMRQFDHPHIVKLIGVITENP-VWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLS 121
Query: 401 KGMNYLHQNNIIHRDLKAANLLMDENEVVKVADFGVARVKAQSGVMTAETGTY--RWMAP 458
+ YL +HRD+ A N+L+ N+ VK+ DFG++R S A G +WMAP
Sbjct: 122 TALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAP 181
Query: 459 EVIEHKPYDHKADVFSFGIVLWELLT-GKLPYE 490
E I + + +DV+ FG+ +WE+L G P++
Sbjct: 182 ESINFRRFTSASDVWMFGVCMWEILMHGVKPFQ 214
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 123 bits (308), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 70/198 (35%), Positives = 115/198 (58%), Gaps = 12/198 (6%)
Query: 297 GSKVASGSYGDLYRGTYCSQDVAIKVLKP--ERINSDMQKEFAQEVFIMRKVRHKNVVQF 354
G+K G +G +Y+G + VA+K L + +++++F QE+ + K +H+N+V+
Sbjct: 27 GNKXGEGGFGVVYKGYVNNTTVAVKKLAAMVDITTEELKQQFDQEIKVXAKCQHENLVEL 86
Query: 355 IGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLP--SLLKVAIDVSKGMNYLHQNNII 412
+G + LC+V + GS+ D L L G L K+A + G+N+LH+N+ I
Sbjct: 87 LGFSSDGDDLCLVYVYXPNGSLLDRLSCLDGTPPLSWHXRCKIAQGAANGINFLHENHHI 146
Query: 413 HRDLKAANLLMDENEVVKVADFGVARVK---AQSGVMTAETGTYRWMAPEVI--EHKPYD 467
HRD+K+AN+L+DE K++DFG+AR AQ + GT + APE + E P
Sbjct: 147 HRDIKSANILLDEAFTAKISDFGLARASEKFAQXVXXSRIVGTTAYXAPEALRGEITP-- 204
Query: 468 HKADVFSFGIVLWELLTG 485
K+D++SFG+VL E++TG
Sbjct: 205 -KSDIYSFGVVLLEIITG 221
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 123 bits (308), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 71/213 (33%), Positives = 113/213 (53%), Gaps = 12/213 (5%)
Query: 287 WEIDPKHLKFGSKVASGSYGDLYRGTYCSQD-----VAIKVLKPERINSDMQKE-FAQEV 340
+EI + ++ G + G +GD+++G Y S + VAIK K SD +E F QE
Sbjct: 5 YEIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCK--NCTSDSVREKFLQEA 62
Query: 341 FIMRKVRHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVS 400
MR+ H ++V+ IG T+ P + I+ E + G + +L K L SL+ A +S
Sbjct: 63 LTMRQFDHPHIVKLIGVITENP-VWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLS 121
Query: 401 KGMNYLHQNNIIHRDLKAANLLMDENEVVKVADFGVARVKAQSGVMTAETGTY--RWMAP 458
+ YL +HRD+ A N+L+ N+ VK+ DFG++R S A G +WMAP
Sbjct: 122 TALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAP 181
Query: 459 EVIEHKPYDHKADVFSFGIVLWELLT-GKLPYE 490
E I + + +DV+ FG+ +WE+L G P++
Sbjct: 182 ESINFRRFTSASDVWMFGVCMWEILMHGVKPFQ 214
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 123 bits (308), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 76/231 (32%), Positives = 119/231 (51%), Gaps = 19/231 (8%)
Query: 274 PYHLKIPNDGTDVW--EIDPKHLKFGSKVASGSYGDLYRGTY--------CSQDVAIKVL 323
P+ + PN + EID +K + G +G++ G C VAIK L
Sbjct: 9 PFTFEDPNQAVREFAKEIDASCIKIEKVIGVGEFGEVCSGRLKVPGKREIC---VAIKTL 65
Query: 324 KPERINSDMQKEFAQEVFIMRKVRHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKL 383
K + +++F E IM + H N++ G TK + I+TE+M GS+ +L K
Sbjct: 66 KAGYTDKQ-RRDFLSEASIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFLRKN 124
Query: 384 KGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDLKAANLLMDENEVVKVADFGVARVKAQ- 442
G F + L+ + + GM YL + +HRDL A N+L++ N V KV+DFG++RV
Sbjct: 125 DGRFTVIQLVGMLRGIGSGMKYLSDMSAVHRDLAARNILVNSNLVCKVSDFGMSRVLEDD 184
Query: 443 -SGVMTAETGT--YRWMAPEVIEHKPYDHKADVFSFGIVLWELLT-GKLPY 489
T G RW APE I ++ + +DV+S+GIV+WE+++ G+ PY
Sbjct: 185 PEAAYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPY 235
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 122 bits (306), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 73/232 (31%), Positives = 117/232 (50%), Gaps = 30/232 (12%)
Query: 287 WEIDPKHLKFGSKVASGSYGDLYRGTYCSQD---------VAIKVLKPERINSDMQKEFA 337
WE+ L G + G++G + D VA+K+LK + D+ +
Sbjct: 23 WELPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLS-DLI 81
Query: 338 QEVFIMRKV-RHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYL---------------H 381
E+ +M+ + +HKN++ +GACT+ L ++ E+ S G++ +YL H
Sbjct: 82 SEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEFSFNPSH 141
Query: 382 KLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDLKAANLLMDENEVVKVADFGVARVKA 441
+ L+ A V++GM YL IHRDL A N+L+ E+ V+K+ADFG+AR
Sbjct: 142 NPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIH 201
Query: 442 QSGVMTAETGT---YRWMAPEVIEHKPYDHKADVFSFGIVLWELLT-GKLPY 489
T +WMAPE + + Y H++DV+SFG++LWE+ T G PY
Sbjct: 202 HIDXXKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPY 253
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 122 bits (306), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 78/255 (30%), Positives = 127/255 (49%), Gaps = 42/255 (16%)
Query: 269 GMKSHPYHLKIPNDGTDVWEIDPKHLKFGSKVASGSYGDLYRGTYCSQD---------VA 319
GM + ++P D WE+ L G + G++G + D VA
Sbjct: 48 GMLAGVSEYELPEDPR--WELPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVA 105
Query: 320 IKVLKPERINSDMQKEFAQEVFIMRKV-RHKNVVQFIGACTKPPSLCIVTEFMSGGSVYD 378
+K+LK + D+ + E+ +M+ + +HKN++ +GACT+ L ++ E+ S G++ +
Sbjct: 106 VKMLKSDATEKDLS-DLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLRE 164
Query: 379 YL---------------HKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDLKAANLLM 423
YL H + L+ A V++GM YL IHRDL A N+L+
Sbjct: 165 YLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLV 224
Query: 424 DENEVVKVADFGVAR--------VKAQSGVMTAETGTYRWMAPEVIEHKPYDHKADVFSF 475
E+ V+K+ADFG+AR K +G + +WMAPE + + Y H++DV+SF
Sbjct: 225 TEDNVMKIADFGLARDIHHIDYYKKTTNGRLPV-----KWMAPEALFDRIYTHQSDVWSF 279
Query: 476 GIVLWELLT-GKLPY 489
G++LWE+ T G PY
Sbjct: 280 GVLLWEIFTLGGSPY 294
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 122 bits (306), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 74/237 (31%), Positives = 120/237 (50%), Gaps = 40/237 (16%)
Query: 287 WEIDPKHLKFGSKVASGSYGDLYRGTYCSQD---------VAIKVLKPERINSDMQKEFA 337
WE+ L G + G++G + D VA+K+LK + D+ +
Sbjct: 16 WELPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLS-DLI 74
Query: 338 QEVFIMRKV-RHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYL---------------H 381
E+ +M+ + +HKN++ +GACT+ L ++ E+ S G++ +YL H
Sbjct: 75 SEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSH 134
Query: 382 KLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDLKAANLLMDENEVVKVADFGVAR--- 438
+ L+ A V++GM YL IHRDL A N+L+ E+ V+K+ADFG+AR
Sbjct: 135 NPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIH 194
Query: 439 -----VKAQSGVMTAETGTYRWMAPEVIEHKPYDHKADVFSFGIVLWELLT-GKLPY 489
K +G + +WMAPE + + Y H++DV+SFG++LWE+ T G PY
Sbjct: 195 HIDYYKKTTNGRLPV-----KWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPY 246
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 122 bits (305), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 77/257 (29%), Positives = 128/257 (49%), Gaps = 42/257 (16%)
Query: 267 DTGMKSHPYHLKIPNDGTDVWEIDPKHLKFGSKVASGSYGDLYRGTYCSQD--------- 317
DT M + ++P D WE L G + G +G + D
Sbjct: 4 DTPMLAGVSEYELPEDPK--WEFPRDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVT 61
Query: 318 VAIKVLKPERINSDMQKEFAQEVFIMRKV-RHKNVVQFIGACTKPPSLCIVTEFMSGGSV 376
VA+K+LK + D+ + E+ +M+ + +HKN++ +GACT+ L ++ E+ S G++
Sbjct: 62 VAVKMLKDDATEKDLS-DLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNL 120
Query: 377 YDYLHKLK--------GVFKLPS-------LLKVAIDVSKGMNYLHQNNIIHRDLKAANL 421
+YL + + ++P L+ +++GM YL IHRDL A N+
Sbjct: 121 REYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNV 180
Query: 422 LMDENEVVKVADFGVAR--------VKAQSGVMTAETGTYRWMAPEVIEHKPYDHKADVF 473
L+ EN V+K+ADFG+AR K +G + +WMAPE + + Y H++DV+
Sbjct: 181 LVTENNVMKIADFGLARDINNIDYYKKTTNGRLPV-----KWMAPEALFDRVYTHQSDVW 235
Query: 474 SFGIVLWELLT-GKLPY 489
SFG+++WE+ T G PY
Sbjct: 236 SFGVLMWEIFTLGGSPY 252
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 122 bits (305), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 74/237 (31%), Positives = 120/237 (50%), Gaps = 40/237 (16%)
Query: 287 WEIDPKHLKFGSKVASGSYGDLYRGTYCSQD---------VAIKVLKPERINSDMQKEFA 337
WE+ L G + G++G + D VA+K+LK + D+ +
Sbjct: 23 WELPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLS-DLI 81
Query: 338 QEVFIMRKV-RHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYL---------------H 381
E+ +M+ + +HKN++ +GACT+ L ++ E+ S G++ +YL H
Sbjct: 82 SEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSH 141
Query: 382 KLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDLKAANLLMDENEVVKVADFGVAR--- 438
+ L+ A V++GM YL IHRDL A N+L+ E+ V+K+ADFG+AR
Sbjct: 142 NPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIH 201
Query: 439 -----VKAQSGVMTAETGTYRWMAPEVIEHKPYDHKADVFSFGIVLWELLT-GKLPY 489
K +G + +WMAPE + + Y H++DV+SFG++LWE+ T G PY
Sbjct: 202 HIDYYKKTTNGRLPV-----KWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPY 253
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 122 bits (305), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 74/237 (31%), Positives = 120/237 (50%), Gaps = 40/237 (16%)
Query: 287 WEIDPKHLKFGSKVASGSYGDLYRGTYCSQD---------VAIKVLKPERINSDMQKEFA 337
WE+ L G + G++G + D VA+K+LK + D+ +
Sbjct: 15 WELPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLS-DLI 73
Query: 338 QEVFIMRKV-RHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYL---------------H 381
E+ +M+ + +HKN++ +GACT+ L ++ E+ S G++ +YL H
Sbjct: 74 SEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSH 133
Query: 382 KLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDLKAANLLMDENEVVKVADFGVAR--- 438
+ L+ A V++GM YL IHRDL A N+L+ E+ V+K+ADFG+AR
Sbjct: 134 NPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIH 193
Query: 439 -----VKAQSGVMTAETGTYRWMAPEVIEHKPYDHKADVFSFGIVLWELLT-GKLPY 489
K +G + +WMAPE + + Y H++DV+SFG++LWE+ T G PY
Sbjct: 194 HIDYYKKTTNGRLPV-----KWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPY 245
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 122 bits (305), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 74/237 (31%), Positives = 120/237 (50%), Gaps = 40/237 (16%)
Query: 287 WEIDPKHLKFGSKVASGSYGDLYRGTYCSQD---------VAIKVLKPERINSDMQKEFA 337
WE+ L G + G++G + D VA+K+LK + D+ +
Sbjct: 12 WELPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLS-DLI 70
Query: 338 QEVFIMRKV-RHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYL---------------H 381
E+ +M+ + +HKN++ +GACT+ L ++ E+ S G++ +YL H
Sbjct: 71 SEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSH 130
Query: 382 KLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDLKAANLLMDENEVVKVADFGVAR--- 438
+ L+ A V++GM YL IHRDL A N+L+ E+ V+K+ADFG+AR
Sbjct: 131 NPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIH 190
Query: 439 -----VKAQSGVMTAETGTYRWMAPEVIEHKPYDHKADVFSFGIVLWELLT-GKLPY 489
K +G + +WMAPE + + Y H++DV+SFG++LWE+ T G PY
Sbjct: 191 HIDYYKKTTNGRLPV-----KWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPY 242
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 122 bits (305), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 74/237 (31%), Positives = 120/237 (50%), Gaps = 40/237 (16%)
Query: 287 WEIDPKHLKFGSKVASGSYGDLYRGTYCSQD---------VAIKVLKPERINSDMQKEFA 337
WE+ L G + G++G + D VA+K+LK + D+ +
Sbjct: 23 WELPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLS-DLI 81
Query: 338 QEVFIMRKV-RHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYL---------------H 381
E+ +M+ + +HKN++ +GACT+ L ++ E+ S G++ +YL H
Sbjct: 82 SEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQAREPPGLEYSYNPSH 141
Query: 382 KLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDLKAANLLMDENEVVKVADFGVAR--- 438
+ L+ A V++GM YL IHRDL A N+L+ E+ V+K+ADFG+AR
Sbjct: 142 NPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIH 201
Query: 439 -----VKAQSGVMTAETGTYRWMAPEVIEHKPYDHKADVFSFGIVLWELLT-GKLPY 489
K +G + +WMAPE + + Y H++DV+SFG++LWE+ T G PY
Sbjct: 202 HIDYYKKTTNGRLPV-----KWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPY 253
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 122 bits (305), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 78/239 (32%), Positives = 119/239 (49%), Gaps = 28/239 (11%)
Query: 278 KIPNDGTDVWEIDPKHLKFGSKVASGSYGDLYRG-------TYCSQDVAIKVLKPERINS 330
++P D + WE LK G + G++G + T + VA+K+LK +S
Sbjct: 5 RLPYDASK-WEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHS 63
Query: 331 DMQKEFAQEVFIMRKVRHKNVVQFIGACTKPPS-LCIVTEFMSGGSVYDYLHKLKGVF-- 387
+ + ++ ++ H NVV +GACTKP L ++TEF G++ YL + F
Sbjct: 64 EHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVP 123
Query: 388 -------------KLPSLLKVAIDVSKGMNYLHQNNIIHRDLKAANLLMDENEVVKVADF 434
L L+ + V+KGM +L IHRDL A N+L+ E VVK+ DF
Sbjct: 124 YKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDF 183
Query: 435 GVAR--VKAQSGVMTAETGT-YRWMAPEVIEHKPYDHKADVFSFGIVLWELLT-GKLPY 489
G+AR K V + +WMAPE I + Y ++DV+SFG++LWE+ + G PY
Sbjct: 184 GLARDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPY 242
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 122 bits (305), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 74/237 (31%), Positives = 120/237 (50%), Gaps = 40/237 (16%)
Query: 287 WEIDPKHLKFGSKVASGSYGDLYRGTYCSQD---------VAIKVLKPERINSDMQKEFA 337
WE+ L G + G++G + D VA+K+LK + D+ +
Sbjct: 23 WELPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLS-DLI 81
Query: 338 QEVFIMRKV-RHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYL---------------H 381
E+ +M+ + +HKN++ +GACT+ L ++ E+ S G++ +YL H
Sbjct: 82 SEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSH 141
Query: 382 KLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDLKAANLLMDENEVVKVADFGVAR--- 438
+ L+ A V++GM YL IHRDL A N+L+ E+ V+K+ADFG+AR
Sbjct: 142 NPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIH 201
Query: 439 -----VKAQSGVMTAETGTYRWMAPEVIEHKPYDHKADVFSFGIVLWELLT-GKLPY 489
K +G + +WMAPE + + Y H++DV+SFG++LWE+ T G PY
Sbjct: 202 HIDYYKKTTNGRLPV-----KWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPY 253
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 122 bits (305), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 74/237 (31%), Positives = 120/237 (50%), Gaps = 40/237 (16%)
Query: 287 WEIDPKHLKFGSKVASGSYGDLYRGTYCSQD---------VAIKVLKPERINSDMQKEFA 337
WE+ L G + G++G + D VA+K+LK + D+ +
Sbjct: 8 WELPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLS-DLI 66
Query: 338 QEVFIMRKV-RHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYL---------------H 381
E+ +M+ + +HKN++ +GACT+ L ++ E+ S G++ +YL H
Sbjct: 67 SEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSH 126
Query: 382 KLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDLKAANLLMDENEVVKVADFGVAR--- 438
+ L+ A V++GM YL IHRDL A N+L+ E+ V+K+ADFG+AR
Sbjct: 127 NPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIH 186
Query: 439 -----VKAQSGVMTAETGTYRWMAPEVIEHKPYDHKADVFSFGIVLWELLT-GKLPY 489
K +G + +WMAPE + + Y H++DV+SFG++LWE+ T G PY
Sbjct: 187 HIDYYKKTTNGRLPV-----KWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPY 238
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 121 bits (304), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 73/215 (33%), Positives = 113/215 (52%), Gaps = 17/215 (7%)
Query: 288 EIDPKHLKFGSKVASGSYGDLYRGTY--------CSQDVAIKVLKPERINSDMQKEFAQE 339
EID +K + G +G++ G C VAIK LK + +++F E
Sbjct: 10 EIDASCIKIEKVIGVGEFGEVCSGRLKVPGKREIC---VAIKTLKAGYTDKQ-RRDFLSE 65
Query: 340 VFIMRKVRHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDV 399
IM + H N++ G TK + I+TE+M GS+ +L K G F + L+ + +
Sbjct: 66 ASIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVIQLVGMLRGI 125
Query: 400 SKGMNYLHQNNIIHRDLKAANLLMDENEVVKVADFGVARVKAQ--SGVMTAETGT--YRW 455
GM YL + +HRDL A N+L++ N V KV+DFG++RV T G RW
Sbjct: 126 GSGMKYLSDMSYVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRW 185
Query: 456 MAPEVIEHKPYDHKADVFSFGIVLWELLT-GKLPY 489
APE I ++ + +DV+S+GIV+WE+++ G+ PY
Sbjct: 186 TAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPY 220
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 121 bits (304), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 72/212 (33%), Positives = 113/212 (53%), Gaps = 11/212 (5%)
Query: 288 EIDPKHLKFGSKVASGSYGDLYRG-----TYCSQDVAIKVLKPERINSDMQKEFAQEVFI 342
E+D ++ V +G +G++ G + VAIK LK +++F E I
Sbjct: 41 ELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVG-YTEKQRRDFLGEASI 99
Query: 343 MRKVRHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKG 402
M + H N+++ G TK + IVTE+M GS+ +L K F + L+ + ++ G
Sbjct: 100 MGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASG 159
Query: 403 MNYLHQNNIIHRDLKAANLLMDENEVVKVADFGVARVKAQS--GVMTAETGT--YRWMAP 458
M YL +HRDL A N+L++ N V KV+DFG+ARV T G RW +P
Sbjct: 160 MKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLARVLEDDPEAAYTTRGGKIPIRWTSP 219
Query: 459 EVIEHKPYDHKADVFSFGIVLWELLT-GKLPY 489
E I ++ + +DV+S+GIVLWE+++ G+ PY
Sbjct: 220 EAIAYRKFTSASDVWSYGIVLWEVMSYGERPY 251
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 121 bits (304), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 70/214 (32%), Positives = 116/214 (54%), Gaps = 13/214 (6%)
Query: 288 EIDPKHLKFGSKVASGSYGDLYRGTYCSQD-----VAIKVLKPERINSDMQKEFAQEVFI 342
EID ++K + +G +G++ RG + VAIK LK ++EF E I
Sbjct: 10 EIDVSYVKIEEVIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGG-YTERQRREFLSEASI 68
Query: 343 MRKVRHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKG 402
M + H N+++ G T + I+TEFM G++ +L G F + L+ + ++ G
Sbjct: 69 MGQFEHPNIIRLEGVVTNSMPVMILTEFMENGALDSFLRLNDGQFTVIQLVGMLRGIASG 128
Query: 403 MNYLHQNNIIHRDLKAANLLMDENEVVKVADFGVARVKAQSG---VMTAETGT---YRWM 456
M YL + + +HRDL A N+L++ N V KV+DFG++R ++ T+ G RW
Sbjct: 129 MRYLAEMSYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTYTSSLGGKIPIRWT 188
Query: 457 APEVIEHKPYDHKADVFSFGIVLWELLT-GKLPY 489
APE I + + +D +S+GIV+WE+++ G+ PY
Sbjct: 189 APEAIAFRKFTSASDAWSYGIVMWEVMSFGERPY 222
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 121 bits (303), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 73/215 (33%), Positives = 113/215 (52%), Gaps = 17/215 (7%)
Query: 288 EIDPKHLKFGSKVASGSYGDLYRGTY--------CSQDVAIKVLKPERINSDMQKEFAQE 339
EID +K + G +G++ G C VAIK LK + +++F E
Sbjct: 4 EIDASCIKIEKVIGVGEFGEVCSGRLKVPGKREIC---VAIKTLKAGYTDKQ-RRDFLSE 59
Query: 340 VFIMRKVRHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDV 399
IM + H N++ G TK + I+TE+M GS+ +L K G F + L+ + +
Sbjct: 60 ASIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVIQLVGMLRGI 119
Query: 400 SKGMNYLHQNNIIHRDLKAANLLMDENEVVKVADFGVARVKAQ--SGVMTAETGT--YRW 455
GM YL + +HRDL A N+L++ N V KV+DFG++RV T G RW
Sbjct: 120 GSGMKYLSDMSYVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRW 179
Query: 456 MAPEVIEHKPYDHKADVFSFGIVLWELLT-GKLPY 489
APE I ++ + +DV+S+GIV+WE+++ G+ PY
Sbjct: 180 TAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPY 214
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 121 bits (303), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 71/232 (30%), Positives = 118/232 (50%), Gaps = 30/232 (12%)
Query: 287 WEIDPKHLKFGSKVASGSYGDLYRGTYCSQD---------VAIKVLKPERINSDMQKEFA 337
WE L G + G++G + D VA+K+LK + D+ +
Sbjct: 30 WEFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLS-DLV 88
Query: 338 QEVFIMRKV-RHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLK--------GVFK 388
E+ +M+ + +HKN++ +GACT+ L ++ E+ S G++ +YL + + +
Sbjct: 89 SEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEXSYDINR 148
Query: 389 LPS-------LLKVAIDVSKGMNYLHQNNIIHRDLKAANLLMDENEVVKVADFGVARVKA 441
+P L+ +++GM YL IHRDL A N+L+ EN V+K+ADFG+AR
Sbjct: 149 VPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDIN 208
Query: 442 QSGVMTAETGT---YRWMAPEVIEHKPYDHKADVFSFGIVLWELLT-GKLPY 489
T +WMAPE + + Y H++DV+SFG+++WE+ T G PY
Sbjct: 209 NIDXXKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPY 260
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 121 bits (303), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 71/232 (30%), Positives = 118/232 (50%), Gaps = 30/232 (12%)
Query: 287 WEIDPKHLKFGSKVASGSYGDLYRGTYCSQD---------VAIKVLKPERINSDMQKEFA 337
WE L G + G++G + D VA+K+LK + D+ +
Sbjct: 30 WEFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLS-DLV 88
Query: 338 QEVFIMRKV-RHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLK--------GVFK 388
E+ +M+ + +HKN++ +GACT+ L ++ E+ S G++ +YL + + +
Sbjct: 89 SEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINR 148
Query: 389 LPS-------LLKVAIDVSKGMNYLHQNNIIHRDLKAANLLMDENEVVKVADFGVARVKA 441
+P L+ +++GM YL IHRDL A N+L+ EN V+K+ADFG+AR
Sbjct: 149 VPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDIN 208
Query: 442 QSGVMTAETGT---YRWMAPEVIEHKPYDHKADVFSFGIVLWELLT-GKLPY 489
T +WMAPE + + Y H++DV+SFG+++WE+ T G PY
Sbjct: 209 NIDXXKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPY 260
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 121 bits (303), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 71/212 (33%), Positives = 113/212 (53%), Gaps = 11/212 (5%)
Query: 288 EIDPKHLKFGSKVASGSYGDLYRG-----TYCSQDVAIKVLKPERINSDMQKEFAQEVFI 342
E+D ++ V +G +G++ G + VAIK LK +++F E I
Sbjct: 41 ELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVG-YTEKQRRDFLGEASI 99
Query: 343 MRKVRHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKG 402
M + H N+++ G TK + IVTE+M GS+ +L K F + L+ + ++ G
Sbjct: 100 MGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASG 159
Query: 403 MNYLHQNNIIHRDLKAANLLMDENEVVKVADFGVARVKAQ--SGVMTAETGT--YRWMAP 458
M YL +HRDL A N+L++ N V KV+DFG++RV T G RW +P
Sbjct: 160 MKYLSDMGFVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSP 219
Query: 459 EVIEHKPYDHKADVFSFGIVLWELLT-GKLPY 489
E I ++ + +DV+S+GIVLWE+++ G+ PY
Sbjct: 220 EAIAYRKFTSASDVWSYGIVLWEVMSYGERPY 251
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 121 bits (303), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 78/239 (32%), Positives = 119/239 (49%), Gaps = 28/239 (11%)
Query: 278 KIPNDGTDVWEIDPKHLKFGSKVASGSYGDLYRG-------TYCSQDVAIKVLKPERINS 330
++P D + WE LK G + G++G + T + VA+K+LK +S
Sbjct: 5 RLPYDASK-WEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHS 63
Query: 331 DMQKEFAQEVFIMRKVRHKNVVQFIGACTKPPS-LCIVTEFMSGGSVYDYLHKLKGVF-- 387
+ + ++ ++ H NVV +GACTKP L ++TEF G++ YL + F
Sbjct: 64 EHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVP 123
Query: 388 -------------KLPSLLKVAIDVSKGMNYLHQNNIIHRDLKAANLLMDENEVVKVADF 434
L L+ + V+KGM +L IHRDL A N+L+ E VVK+ DF
Sbjct: 124 YKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDF 183
Query: 435 GVAR--VKAQSGVMTAETGT-YRWMAPEVIEHKPYDHKADVFSFGIVLWELLT-GKLPY 489
G+AR K V + +WMAPE I + Y ++DV+SFG++LWE+ + G PY
Sbjct: 184 GLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPY 242
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 121 bits (303), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 78/239 (32%), Positives = 119/239 (49%), Gaps = 28/239 (11%)
Query: 278 KIPNDGTDVWEIDPKHLKFGSKVASGSYGDLYRG-------TYCSQDVAIKVLKPERINS 330
++P D + WE LK G + G++G + T + VA+K+LK +S
Sbjct: 5 RLPYDASK-WEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHS 63
Query: 331 DMQKEFAQEVFIMRKVRHKNVVQFIGACTKPPS-LCIVTEFMSGGSVYDYLHKLKGVF-- 387
+ + ++ ++ H NVV +GACTKP L ++TEF G++ YL + F
Sbjct: 64 EHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVP 123
Query: 388 -------------KLPSLLKVAIDVSKGMNYLHQNNIIHRDLKAANLLMDENEVVKVADF 434
L L+ + V+KGM +L IHRDL A N+L+ E VVK+ DF
Sbjct: 124 YKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDF 183
Query: 435 GVAR--VKAQSGVMTAETGT-YRWMAPEVIEHKPYDHKADVFSFGIVLWELLT-GKLPY 489
G+AR K V + +WMAPE I + Y ++DV+SFG++LWE+ + G PY
Sbjct: 184 GLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPY 242
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 120 bits (302), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 70/213 (32%), Positives = 112/213 (52%), Gaps = 12/213 (5%)
Query: 287 WEIDPKHLKFGSKVASGSYGDLYRGTYCSQD-----VAIKVLKPERINSDMQKE-FAQEV 340
+EI + ++ G + G +GD+++G Y S + VAIK K SD +E F QE
Sbjct: 5 YEIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCK--NCTSDSVREKFLQEA 62
Query: 341 FIMRKVRHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVS 400
MR+ H ++V+ IG T+ P + I+ E + G + +L K L SL+ A +S
Sbjct: 63 LTMRQFDHPHIVKLIGVITENP-VWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLS 121
Query: 401 KGMNYLHQNNIIHRDLKAANLLMDENEVVKVADFGVARVKAQSGVMTAETGTY--RWMAP 458
+ YL +HRD+ A N+L+ + VK+ DFG++R S A G +WMAP
Sbjct: 122 TALAYLESKRFVHRDIAARNVLVSATDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAP 181
Query: 459 EVIEHKPYDHKADVFSFGIVLWELLT-GKLPYE 490
E I + + +DV+ FG+ +WE+L G P++
Sbjct: 182 ESINFRRFTSASDVWMFGVCMWEILMHGVKPFQ 214
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 120 bits (302), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 72/237 (30%), Positives = 121/237 (51%), Gaps = 40/237 (16%)
Query: 287 WEIDPKHLKFGSKVASGSYGDLYRGTYCSQD---------VAIKVLKPERINSDMQKEFA 337
WE L G + G++G + D VA+K+LK + D+ +
Sbjct: 30 WEFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEEDLS-DLV 88
Query: 338 QEVFIMRKV-RHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLK--------GVFK 388
E+ +M+ + +HKN++ +GACT+ L ++ E+ S G++ +YL + + +
Sbjct: 89 SEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINR 148
Query: 389 LPS-------LLKVAIDVSKGMNYLHQNNIIHRDLKAANLLMDENEVVKVADFGVAR--- 438
+P L+ +++GM YL IHRDL A N+L+ EN V+K+ADFG+AR
Sbjct: 149 VPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDIN 208
Query: 439 -----VKAQSGVMTAETGTYRWMAPEVIEHKPYDHKADVFSFGIVLWELLT-GKLPY 489
K +G + +WMAPE + + Y H++DV+SFG+++WE+ T G PY
Sbjct: 209 NIDYYKKTTNGRLPV-----KWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPY 260
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 120 bits (302), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 77/214 (35%), Positives = 119/214 (55%), Gaps = 19/214 (8%)
Query: 300 VASGSYGDLYRGTY--CSQDVAIKVLKPERINSDMQKEFAQEVFIMRKV-RHKNVVQFIG 356
V +G+YG +Y+G + Q AIKV+ + D ++E QE+ +++K H+N+ + G
Sbjct: 32 VGNGTYGQVYKGRHVKTGQLAAIKVMD---VTGDEEEEIKQEINMLKKYSHHRNIATYYG 88
Query: 357 ACTK--PPS----LCIVTEFMSGGSVYDYLHKLKG-VFKLPSLLKVAIDVSKGMNYLHQN 409
A K PP L +V EF GSV D + KG K + + ++ +G+++LHQ+
Sbjct: 89 AFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQH 148
Query: 410 NIIHRDLKAANLLMDENEVVKVADFGV-ARVKAQSGVMTAETGTYRWMAPEVI--EHKP- 465
+IHRD+K N+L+ EN VK+ DFGV A++ G GT WMAPEVI + P
Sbjct: 149 KVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDRTVGRRNTFIGTPYWMAPEVIACDENPD 208
Query: 466 --YDHKADVFSFGIVLWELLTGKLPYEYLTPLQA 497
YD K+D++S GI E+ G P + P++A
Sbjct: 209 ATYDFKSDLWSLGITAIEMAEGAPPLCDMHPMRA 242
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 120 bits (302), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 72/237 (30%), Positives = 121/237 (51%), Gaps = 40/237 (16%)
Query: 287 WEIDPKHLKFGSKVASGSYGDLYRGTYCSQD---------VAIKVLKPERINSDMQKEFA 337
WE L G + G++G + D VA+K+LK + D+ +
Sbjct: 30 WEFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLS-DLV 88
Query: 338 QEVFIMRKV-RHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLK--------GVFK 388
E+ +M+ + +HKN++ +GACT+ L ++ E+ S G++ +YL + + +
Sbjct: 89 SEMEMMKMIGKHKNIITLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINR 148
Query: 389 LPS-------LLKVAIDVSKGMNYLHQNNIIHRDLKAANLLMDENEVVKVADFGVAR--- 438
+P L+ +++GM YL IHRDL A N+L+ EN V+K+ADFG+AR
Sbjct: 149 VPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDIN 208
Query: 439 -----VKAQSGVMTAETGTYRWMAPEVIEHKPYDHKADVFSFGIVLWELLT-GKLPY 489
K +G + +WMAPE + + Y H++DV+SFG+++WE+ T G PY
Sbjct: 209 NIDYYKKTTNGRLPV-----KWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPY 260
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 120 bits (302), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 72/237 (30%), Positives = 121/237 (51%), Gaps = 40/237 (16%)
Query: 287 WEIDPKHLKFGSKVASGSYGDLYRGTYCSQD---------VAIKVLKPERINSDMQKEFA 337
WE L G + G++G + D VA+K+LK + D+ +
Sbjct: 30 WEFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLS-DLV 88
Query: 338 QEVFIMRKV-RHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLK--------GVFK 388
E+ +M+ + +HKN++ +GACT+ L ++ E+ S G++ +YL + + +
Sbjct: 89 SEMEMMKMIGKHKNIIHLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINR 148
Query: 389 LPS-------LLKVAIDVSKGMNYLHQNNIIHRDLKAANLLMDENEVVKVADFGVAR--- 438
+P L+ +++GM YL IHRDL A N+L+ EN V+K+ADFG+AR
Sbjct: 149 VPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDIN 208
Query: 439 -----VKAQSGVMTAETGTYRWMAPEVIEHKPYDHKADVFSFGIVLWELLT-GKLPY 489
K +G + +WMAPE + + Y H++DV+SFG+++WE+ T G PY
Sbjct: 209 NIDYYKKTTNGRLPV-----KWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPY 260
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 120 bits (301), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 71/212 (33%), Positives = 113/212 (53%), Gaps = 11/212 (5%)
Query: 288 EIDPKHLKFGSKVASGSYGDLYRG-----TYCSQDVAIKVLKPERINSDMQKEFAQEVFI 342
E+D ++ V +G +G++ G + VAIK LK +++F E I
Sbjct: 12 ELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVG-YTEKQRRDFLGEASI 70
Query: 343 MRKVRHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKG 402
M + H N+++ G TK + IVTE+M GS+ +L K F + L+ + ++ G
Sbjct: 71 MGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASG 130
Query: 403 MNYLHQNNIIHRDLKAANLLMDENEVVKVADFGVARVKAQ--SGVMTAETGT--YRWMAP 458
M YL +HRDL A N+L++ N V KV+DFG++RV T G RW +P
Sbjct: 131 MKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSP 190
Query: 459 EVIEHKPYDHKADVFSFGIVLWELLT-GKLPY 489
E I ++ + +DV+S+GIVLWE+++ G+ PY
Sbjct: 191 EAIAYRKFTSASDVWSYGIVLWEVMSYGERPY 222
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 120 bits (301), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 71/212 (33%), Positives = 113/212 (53%), Gaps = 11/212 (5%)
Query: 288 EIDPKHLKFGSKVASGSYGDLYRG-----TYCSQDVAIKVLKPERINSDMQKEFAQEVFI 342
E+D ++ V +G +G++ G + VAIK LK +++F E I
Sbjct: 41 ELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVG-YTEKQRRDFLGEASI 99
Query: 343 MRKVRHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKG 402
M + H N+++ G TK + IVTE+M GS+ +L K F + L+ + ++ G
Sbjct: 100 MGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASG 159
Query: 403 MNYLHQNNIIHRDLKAANLLMDENEVVKVADFGVARVKAQ--SGVMTAETGT--YRWMAP 458
M YL +HRDL A N+L++ N V KV+DFG++RV T G RW +P
Sbjct: 160 MKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSP 219
Query: 459 EVIEHKPYDHKADVFSFGIVLWELLT-GKLPY 489
E I ++ + +DV+S+GIVLWE+++ G+ PY
Sbjct: 220 EAIAYRKFTSASDVWSYGIVLWEVMSYGERPY 251
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 120 bits (301), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 71/212 (33%), Positives = 113/212 (53%), Gaps = 11/212 (5%)
Query: 288 EIDPKHLKFGSKVASGSYGDLYRG-----TYCSQDVAIKVLKPERINSDMQKEFAQEVFI 342
E+D ++ V +G +G++ G + VAIK LK +++F E I
Sbjct: 29 ELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVG-YTEKQRRDFLGEASI 87
Query: 343 MRKVRHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKG 402
M + H N+++ G TK + IVTE+M GS+ +L K F + L+ + ++ G
Sbjct: 88 MGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASG 147
Query: 403 MNYLHQNNIIHRDLKAANLLMDENEVVKVADFGVARVKAQ--SGVMTAETGT--YRWMAP 458
M YL +HRDL A N+L++ N V KV+DFG++RV T G RW +P
Sbjct: 148 MKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSP 207
Query: 459 EVIEHKPYDHKADVFSFGIVLWELLT-GKLPY 489
E I ++ + +DV+S+GIVLWE+++ G+ PY
Sbjct: 208 EAIAYRKFTSASDVWSYGIVLWEVMSYGERPY 239
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 120 bits (301), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 71/212 (33%), Positives = 113/212 (53%), Gaps = 11/212 (5%)
Query: 288 EIDPKHLKFGSKVASGSYGDLYRG-----TYCSQDVAIKVLKPERINSDMQKEFAQEVFI 342
E+D ++ V +G +G++ G + VAIK LK +++F E I
Sbjct: 41 ELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVG-YTEKQRRDFLGEASI 99
Query: 343 MRKVRHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKG 402
M + H N+++ G TK + IVTE+M GS+ +L K F + L+ + ++ G
Sbjct: 100 MGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASG 159
Query: 403 MNYLHQNNIIHRDLKAANLLMDENEVVKVADFGVARVKAQ--SGVMTAETGT--YRWMAP 458
M YL +HRDL A N+L++ N V KV+DFG++RV T G RW +P
Sbjct: 160 MKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSP 219
Query: 459 EVIEHKPYDHKADVFSFGIVLWELLT-GKLPY 489
E I ++ + +DV+S+GIVLWE+++ G+ PY
Sbjct: 220 EAIAYRKFTSASDVWSYGIVLWEVMSYGERPY 251
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 120 bits (301), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 71/212 (33%), Positives = 113/212 (53%), Gaps = 11/212 (5%)
Query: 288 EIDPKHLKFGSKVASGSYGDLYRG-----TYCSQDVAIKVLKPERINSDMQKEFAQEVFI 342
E+D ++ V +G +G++ G + VAIK LK +++F E I
Sbjct: 41 ELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVG-YTEKQRRDFLGEASI 99
Query: 343 MRKVRHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKG 402
M + H N+++ G TK + IVTE+M GS+ +L K F + L+ + ++ G
Sbjct: 100 MGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASG 159
Query: 403 MNYLHQNNIIHRDLKAANLLMDENEVVKVADFGVARVKAQ--SGVMTAETGT--YRWMAP 458
M YL +HRDL A N+L++ N V KV+DFG++RV T G RW +P
Sbjct: 160 MKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSP 219
Query: 459 EVIEHKPYDHKADVFSFGIVLWELLT-GKLPY 489
E I ++ + +DV+S+GIVLWE+++ G+ PY
Sbjct: 220 EAIAYRKFTSASDVWSYGIVLWEVMSYGERPY 251
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 120 bits (301), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 71/212 (33%), Positives = 113/212 (53%), Gaps = 11/212 (5%)
Query: 288 EIDPKHLKFGSKVASGSYGDLYRG-----TYCSQDVAIKVLKPERINSDMQKEFAQEVFI 342
E+D ++ V +G +G++ G + VAIK LK +++F E I
Sbjct: 41 ELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVG-YTEKQRRDFLGEASI 99
Query: 343 MRKVRHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKG 402
M + H N+++ G TK + IVTE+M GS+ +L K F + L+ + ++ G
Sbjct: 100 MGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASG 159
Query: 403 MNYLHQNNIIHRDLKAANLLMDENEVVKVADFGVARVKAQ--SGVMTAETGT--YRWMAP 458
M YL +HRDL A N+L++ N V KV+DFG++RV T G RW +P
Sbjct: 160 MKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSP 219
Query: 459 EVIEHKPYDHKADVFSFGIVLWELLT-GKLPY 489
E I ++ + +DV+S+GIVLWE+++ G+ PY
Sbjct: 220 EAIAYRKFTSASDVWSYGIVLWEVMSYGERPY 251
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 120 bits (301), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 72/237 (30%), Positives = 120/237 (50%), Gaps = 40/237 (16%)
Query: 287 WEIDPKHLKFGSKVASGSYGDLYRGTYCSQD---------VAIKVLKPERINSDMQKEFA 337
WE L G + G +G + D VA+K+LK + D+ +
Sbjct: 17 WEFPRDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLS-DLV 75
Query: 338 QEVFIMRKV-RHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLK--------GVFK 388
E+ +M+ + +HKN++ +GACT+ L ++ E+ S G++ +YL + + +
Sbjct: 76 SEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINR 135
Query: 389 LPS-------LLKVAIDVSKGMNYLHQNNIIHRDLKAANLLMDENEVVKVADFGVAR--- 438
+P L+ +++GM YL IHRDL A N+L+ EN V+K+ADFG+AR
Sbjct: 136 VPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLTARNVLVTENNVMKIADFGLARDIN 195
Query: 439 -----VKAQSGVMTAETGTYRWMAPEVIEHKPYDHKADVFSFGIVLWELLT-GKLPY 489
K +G + +WMAPE + + Y H++DV+SFG+++WE+ T G PY
Sbjct: 196 NIDYYKKTTNGRLPV-----KWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPY 247
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 120 bits (301), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 73/218 (33%), Positives = 115/218 (52%), Gaps = 13/218 (5%)
Query: 288 EIDPKHLKFGSKVASGSYGDLYRGTYCSQD-----VAIKVLKPERINSDMQKEFAQEVFI 342
EID +K + +G +G++ G VAIK LK +++F E I
Sbjct: 3 EIDISCVKIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLK-SGYTEKQRRDFLSEASI 61
Query: 343 MRKVRHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKG 402
M + H NV+ G TK + I+TEFM GS+ +L + G F + L+ + ++ G
Sbjct: 62 MGQFDHPNVIHLEGVVTKSTPVMIITEFMENGSLDSFLRQNDGQFTVIQLVGMLRGIAAG 121
Query: 403 MNYLHQNNIIHRDLKAANLLMDENEVVKVADFGVARV---KAQSGVMTAETGT---YRWM 456
M YL N +HR L A N+L++ N V KV+DFG++R T+ G RW
Sbjct: 122 MKYLADMNYVHRALAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWT 181
Query: 457 APEVIEHKPYDHKADVFSFGIVLWELLT-GKLPYEYLT 493
APE I+++ + +DV+S+GIV+WE+++ G+ PY +T
Sbjct: 182 APEAIQYRKFTSASDVWSYGIVMWEVMSYGERPYWDMT 219
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 120 bits (301), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 71/232 (30%), Positives = 118/232 (50%), Gaps = 30/232 (12%)
Query: 287 WEIDPKHLKFGSKVASGSYGDLYRGTYCSQD---------VAIKVLKPERINSDMQKEFA 337
WE L G + G++G + D VA+K+LK + D+ +
Sbjct: 30 WEFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLS-DLV 88
Query: 338 QEVFIMRKV-RHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLK--------GVFK 388
E+ +M+ + +HKN++ +GACT+ L ++ E+ S G++ +YL + + +
Sbjct: 89 SEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINR 148
Query: 389 LPS-------LLKVAIDVSKGMNYLHQNNIIHRDLKAANLLMDENEVVKVADFGVARVKA 441
+P L+ +++GM YL IHRDL A N+L+ EN V+K+ADFG+AR
Sbjct: 149 VPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDIN 208
Query: 442 QSGVMTAETGT---YRWMAPEVIEHKPYDHKADVFSFGIVLWELLT-GKLPY 489
T +WMAPE + + Y H++DV+SFG+++WE+ T G PY
Sbjct: 209 NIDYYKNTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPY 260
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 120 bits (301), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 71/212 (33%), Positives = 113/212 (53%), Gaps = 11/212 (5%)
Query: 288 EIDPKHLKFGSKVASGSYGDLYRG-----TYCSQDVAIKVLKPERINSDMQKEFAQEVFI 342
E+D ++ V +G +G++ G + VAIK LK +++F E I
Sbjct: 39 ELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVG-YTEKQRRDFLGEASI 97
Query: 343 MRKVRHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKG 402
M + H N+++ G TK + IVTE+M GS+ +L K F + L+ + ++ G
Sbjct: 98 MGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASG 157
Query: 403 MNYLHQNNIIHRDLKAANLLMDENEVVKVADFGVARVKAQS--GVMTAETGT--YRWMAP 458
M YL +HRDL A N+L++ N V KV+DFG++RV T G RW +P
Sbjct: 158 MKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSP 217
Query: 459 EVIEHKPYDHKADVFSFGIVLWELLT-GKLPY 489
E I ++ + +DV+S+GIVLWE+++ G+ PY
Sbjct: 218 EAIAYRKFTSASDVWSYGIVLWEVMSYGERPY 249
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 120 bits (301), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 77/237 (32%), Positives = 118/237 (49%), Gaps = 26/237 (10%)
Query: 278 KIPNDGTDVWEIDPKHLKFGSKVASGSYGDLYRG-------TYCSQDVAIKVLKPERINS 330
++P D + WE LK G + G++G + T + VA+K+LK +S
Sbjct: 16 RLPYDASK-WEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHS 74
Query: 331 DMQKEFAQEVFIMRKVRHKNVVQFIGACTKPPS-LCIVTEFMSGGSVYDYLHKLKGVF-- 387
+ + ++ ++ H NVV +GACTKP L ++ EF G++ YL + F
Sbjct: 75 EHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVP 134
Query: 388 -----------KLPSLLKVAIDVSKGMNYLHQNNIIHRDLKAANLLMDENEVVKVADFGV 436
L L+ + V+KGM +L IHRDL A N+L+ E VVK+ DFG+
Sbjct: 135 YKPEDLYKDFLTLEHLIXYSFQVAKGMEFLASRKXIHRDLAARNILLSEKNVVKICDFGL 194
Query: 437 AR--VKAQSGVMTAETGT-YRWMAPEVIEHKPYDHKADVFSFGIVLWELLT-GKLPY 489
AR K V + +WMAPE I + Y ++DV+SFG++LWE+ + G PY
Sbjct: 195 ARDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPY 251
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 120 bits (300), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 74/212 (34%), Positives = 115/212 (54%), Gaps = 11/212 (5%)
Query: 288 EIDPKHLKFGSKVASGSYGDLYRGTY---CSQDVA--IKVLKPERINSDMQKEFAQEVFI 342
E+D +K + +G +G++ G +DVA IK LK +++F E I
Sbjct: 39 ELDASCIKIERVIGAGEFGEVCSGRLKLPGKRDVAVAIKTLKVG-YTEKQRRDFLCEASI 97
Query: 343 MRKVRHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKG 402
M + H NVV G T+ + IV EFM G++ +L K G F + L+ + ++ G
Sbjct: 98 MGQFDHPNVVHLEGVVTRGKPVMIVIEFMENGALDAFLRKHDGQFTVIQLVGMLRGIAAG 157
Query: 403 MNYLHQNNIIHRDLKAANLLMDENEVVKVADFGVARVKAQ--SGVMTAETGTY--RWMAP 458
M YL +HRDL A N+L++ N V KV+DFG++RV V T G RW AP
Sbjct: 158 MRYLADMGYVHRDLAARNILVNSNLVCKVSDFGLSRVIEDDPEAVYTTTGGKIPVRWTAP 217
Query: 459 EVIEHKPYDHKADVFSFGIVLWELLT-GKLPY 489
E I+++ + +DV+S+GIV+WE+++ G+ PY
Sbjct: 218 EAIQYRKFTSASDVWSYGIVMWEVMSYGERPY 249
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 120 bits (300), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 72/237 (30%), Positives = 120/237 (50%), Gaps = 40/237 (16%)
Query: 287 WEIDPKHLKFGSKVASGSYGDLYRGTYCSQD---------VAIKVLKPERINSDMQKEFA 337
WE L G + G +G + D VA+K+LK + D+ +
Sbjct: 19 WEFPRDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLS-DLV 77
Query: 338 QEVFIMRKV-RHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLK--------GVFK 388
E+ +M+ + +HKN++ +GACT+ L ++ E+ S G++ +YL + + +
Sbjct: 78 SEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINR 137
Query: 389 LPS-------LLKVAIDVSKGMNYLHQNNIIHRDLKAANLLMDENEVVKVADFGVAR--- 438
+P L+ +++GM YL IHRDL A N+L+ EN V+K+ADFG+AR
Sbjct: 138 VPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDIN 197
Query: 439 -----VKAQSGVMTAETGTYRWMAPEVIEHKPYDHKADVFSFGIVLWELLT-GKLPY 489
K +G + +WMAPE + + Y H++DV+SFG+++WE+ T G PY
Sbjct: 198 NIDYYKKTTNGRLPV-----KWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPY 249
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 120 bits (300), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 71/212 (33%), Positives = 112/212 (52%), Gaps = 11/212 (5%)
Query: 288 EIDPKHLKFGSKVASGSYGDLYRG-----TYCSQDVAIKVLKPERINSDMQKEFAQEVFI 342
E+D ++ V +G +G++ G + VAIK LK +++F E I
Sbjct: 41 ELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVG-YTEKQRRDFLGEASI 99
Query: 343 MRKVRHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKG 402
M + H N+++ G TK + IVTE+M GS+ +L K F + L+ + ++ G
Sbjct: 100 MGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASG 159
Query: 403 MNYLHQNNIIHRDLKAANLLMDENEVVKVADFGVARVKAQS--GVMTAETGT--YRWMAP 458
M YL +HRDL A N+L++ N V KV+DFG+ RV T G RW +P
Sbjct: 160 MKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLGRVLEDDPEAAYTTRGGKIPIRWTSP 219
Query: 459 EVIEHKPYDHKADVFSFGIVLWELLT-GKLPY 489
E I ++ + +DV+S+GIVLWE+++ G+ PY
Sbjct: 220 EAIAYRKFTSASDVWSYGIVLWEVMSYGERPY 251
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 120 bits (300), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 69/201 (34%), Positives = 116/201 (57%), Gaps = 12/201 (5%)
Query: 300 VASGSYGDLYRGTYCSQD------VAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQ 353
++SG++G +Y+G + + VAIK L+ E + KE E ++M V + +V +
Sbjct: 23 LSSGAFGTVYKGLWIPEGEKVKIPVAIKELR-EATSPKANKEILDEAYVMASVDNPHVCR 81
Query: 354 FIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIH 413
+G C ++ ++T+ M G + DY+ + K LL + ++KGMNYL ++H
Sbjct: 82 LLGICLTS-TVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVH 140
Query: 414 RDLKAANLLMDENEVVKVADFGVAR-VKAQSGVMTAETGT--YRWMAPEVIEHKPYDHKA 470
RDL A N+L+ + VK+ DFG+A+ + A+ AE G +WMA E I H+ Y H++
Sbjct: 141 RDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQS 200
Query: 471 DVFSFGIVLWELLT-GKLPYE 490
DV+S+G+ +WEL+T G PY+
Sbjct: 201 DVWSYGVTVWELMTFGSKPYD 221
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 120 bits (300), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 69/201 (34%), Positives = 116/201 (57%), Gaps = 12/201 (5%)
Query: 300 VASGSYGDLYRGTYCSQD------VAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQ 353
++SG++G +Y+G + + VAIK L+ E + KE E ++M V + +V +
Sbjct: 30 LSSGAFGTVYKGLWIPEGEKVKIPVAIKELR-EATSPKANKEILDEAYVMASVDNPHVCR 88
Query: 354 FIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIH 413
+G C ++ ++T+ M G + DY+ + K LL + ++KGMNYL ++H
Sbjct: 89 LLGICLTS-TVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVH 147
Query: 414 RDLKAANLLMDENEVVKVADFGVAR-VKAQSGVMTAETGT--YRWMAPEVIEHKPYDHKA 470
RDL A N+L+ + VK+ DFG+A+ + A+ AE G +WMA E I H+ Y H++
Sbjct: 148 RDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQS 207
Query: 471 DVFSFGIVLWELLT-GKLPYE 490
DV+S+G+ +WEL+T G PY+
Sbjct: 208 DVWSYGVTVWELMTFGSKPYD 228
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 120 bits (300), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 69/201 (34%), Positives = 115/201 (57%), Gaps = 12/201 (5%)
Query: 300 VASGSYGDLYRGTYCSQD------VAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQ 353
+ SG++G +Y+G + + VAIK L+ E + KE E ++M V + +V +
Sbjct: 29 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELR-EATSPKANKEILDEAYVMASVDNPHVCR 87
Query: 354 FIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIH 413
+G C ++ ++T+ M G + DY+ + K LL + ++KGMNYL ++H
Sbjct: 88 LLGICLTS-TVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVH 146
Query: 414 RDLKAANLLMDENEVVKVADFGVAR-VKAQSGVMTAETGT--YRWMAPEVIEHKPYDHKA 470
RDL A N+L+ + VK+ DFG+A+ + A+ AE G +WMA E I H+ Y H++
Sbjct: 147 RDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQS 206
Query: 471 DVFSFGIVLWELLT-GKLPYE 490
DV+S+G+ +WEL+T G PY+
Sbjct: 207 DVWSYGVTVWELMTFGSKPYD 227
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 120 bits (300), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 71/237 (29%), Positives = 121/237 (51%), Gaps = 40/237 (16%)
Query: 287 WEIDPKHLKFGSKVASGSYGDLYRGTYCSQD---------VAIKVLKPERINSDMQKEFA 337
WE L G + G++G + D VA+K+LK + D+ +
Sbjct: 30 WEFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLS-DLV 88
Query: 338 QEVFIMRKV-RHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLK--------GVFK 388
E+ +M+ + +HKN++ +GACT+ L ++ E+ S G++ +YL + + +
Sbjct: 89 SEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINR 148
Query: 389 LPS-------LLKVAIDVSKGMNYLHQNNIIHRDLKAANLLMDENEVVKVADFGVAR--- 438
+P L+ +++GM YL IHRDL A N+L+ EN V+++ADFG+AR
Sbjct: 149 VPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMRIADFGLARDIN 208
Query: 439 -----VKAQSGVMTAETGTYRWMAPEVIEHKPYDHKADVFSFGIVLWELLT-GKLPY 489
K +G + +WMAPE + + Y H++DV+SFG+++WE+ T G PY
Sbjct: 209 NIDYYKKTTNGRLPV-----KWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPY 260
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 119 bits (299), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 69/201 (34%), Positives = 115/201 (57%), Gaps = 12/201 (5%)
Query: 300 VASGSYGDLYRGTYCSQD------VAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQ 353
+ SG++G +Y+G + + VAIK L+ E + KE E ++M V + +V +
Sbjct: 23 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELR-EATSPKANKEILDEAYVMASVDNPHVCR 81
Query: 354 FIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIH 413
+G C ++ ++T+ M G + DY+ + K LL + ++KGMNYL ++H
Sbjct: 82 LLGICLTS-TVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVH 140
Query: 414 RDLKAANLLMDENEVVKVADFGVAR-VKAQSGVMTAETGT--YRWMAPEVIEHKPYDHKA 470
RDL A N+L+ + VK+ DFG+A+ + A+ AE G +WMA E I H+ Y H++
Sbjct: 141 RDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQS 200
Query: 471 DVFSFGIVLWELLT-GKLPYE 490
DV+S+G+ +WEL+T G PY+
Sbjct: 201 DVWSYGVTVWELMTFGSKPYD 221
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 119 bits (299), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 69/201 (34%), Positives = 115/201 (57%), Gaps = 12/201 (5%)
Query: 300 VASGSYGDLYRGTYCSQD------VAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQ 353
+ SG++G +Y+G + + VAIK L+ E + KE E ++M V + +V +
Sbjct: 26 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELR-EATSPKANKEILDEAYVMASVDNPHVCR 84
Query: 354 FIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIH 413
+G C ++ ++T+ M G + DY+ + K LL + ++KGMNYL ++H
Sbjct: 85 LLGICLTS-TVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVH 143
Query: 414 RDLKAANLLMDENEVVKVADFGVAR-VKAQSGVMTAETGT--YRWMAPEVIEHKPYDHKA 470
RDL A N+L+ + VK+ DFG+A+ + A+ AE G +WMA E I H+ Y H++
Sbjct: 144 RDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQS 203
Query: 471 DVFSFGIVLWELLT-GKLPYE 490
DV+S+G+ +WEL+T G PY+
Sbjct: 204 DVWSYGVTVWELMTFGSKPYD 224
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 119 bits (299), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 77/239 (32%), Positives = 118/239 (49%), Gaps = 28/239 (11%)
Query: 278 KIPNDGTDVWEIDPKHLKFGSKVASGSYGDLYRG-------TYCSQDVAIKVLKPERINS 330
++P D + WE LK G + G++G + T + VA+K+LK +S
Sbjct: 5 RLPYDASK-WEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHS 63
Query: 331 DMQKEFAQEVFIMRKVRHKNVVQFIGACTKPPS-LCIVTEFMSGGSVYDYLHKLKGVF-- 387
+ + ++ ++ H NVV +GACTKP L ++ EF G++ YL + F
Sbjct: 64 EHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVP 123
Query: 388 -------------KLPSLLKVAIDVSKGMNYLHQNNIIHRDLKAANLLMDENEVVKVADF 434
L L+ + V+KGM +L IHRDL A N+L+ E VVK+ DF
Sbjct: 124 YKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDF 183
Query: 435 GVAR--VKAQSGVMTAETGT-YRWMAPEVIEHKPYDHKADVFSFGIVLWELLT-GKLPY 489
G+AR K V + +WMAPE I + Y ++DV+SFG++LWE+ + G PY
Sbjct: 184 GLARDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPY 242
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 119 bits (299), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 69/201 (34%), Positives = 115/201 (57%), Gaps = 12/201 (5%)
Query: 300 VASGSYGDLYRGTYCSQD------VAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQ 353
+ SG++G +Y+G + + VAIK L+ E + KE E ++M V + +V +
Sbjct: 25 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELR-EATSPKANKEILDEAYVMASVDNPHVCR 83
Query: 354 FIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIH 413
+G C ++ ++T+ M G + DY+ + K LL + ++KGMNYL ++H
Sbjct: 84 LLGICLTS-TVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVH 142
Query: 414 RDLKAANLLMDENEVVKVADFGVAR-VKAQSGVMTAETGT--YRWMAPEVIEHKPYDHKA 470
RDL A N+L+ + VK+ DFG+A+ + A+ AE G +WMA E I H+ Y H++
Sbjct: 143 RDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQS 202
Query: 471 DVFSFGIVLWELLT-GKLPYE 490
DV+S+G+ +WEL+T G PY+
Sbjct: 203 DVWSYGVTVWELMTFGSKPYD 223
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 119 bits (299), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 69/201 (34%), Positives = 115/201 (57%), Gaps = 12/201 (5%)
Query: 300 VASGSYGDLYRGTYCSQD------VAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQ 353
+ SG++G +Y+G + + VAIK L+ E + KE E ++M V + +V +
Sbjct: 26 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELR-EATSPKANKEILDEAYVMASVDNPHVCR 84
Query: 354 FIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIH 413
+G C ++ ++T+ M G + DY+ + K LL + ++KGMNYL ++H
Sbjct: 85 LLGICLTS-TVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVH 143
Query: 414 RDLKAANLLMDENEVVKVADFGVAR-VKAQSGVMTAETGT--YRWMAPEVIEHKPYDHKA 470
RDL A N+L+ + VK+ DFG+A+ + A+ AE G +WMA E I H+ Y H++
Sbjct: 144 RDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQS 203
Query: 471 DVFSFGIVLWELLT-GKLPYE 490
DV+S+G+ +WEL+T G PY+
Sbjct: 204 DVWSYGVTVWELMTFGSKPYD 224
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 119 bits (299), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 69/201 (34%), Positives = 115/201 (57%), Gaps = 12/201 (5%)
Query: 300 VASGSYGDLYRGTYCSQD------VAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQ 353
+ SG++G +Y+G + + VAIK L+ E + KE E ++M V + +V +
Sbjct: 33 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELR-EATSPKANKEILDEAYVMASVDNPHVCR 91
Query: 354 FIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIH 413
+G C ++ ++T+ M G + DY+ + K LL + ++KGMNYL ++H
Sbjct: 92 LLGICLTS-TVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVH 150
Query: 414 RDLKAANLLMDENEVVKVADFGVAR-VKAQSGVMTAETGT--YRWMAPEVIEHKPYDHKA 470
RDL A N+L+ + VK+ DFG+A+ + A+ AE G +WMA E I H+ Y H++
Sbjct: 151 RDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQS 210
Query: 471 DVFSFGIVLWELLT-GKLPYE 490
DV+S+G+ +WEL+T G PY+
Sbjct: 211 DVWSYGVTVWELMTFGSKPYD 231
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 119 bits (299), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 69/201 (34%), Positives = 115/201 (57%), Gaps = 12/201 (5%)
Query: 300 VASGSYGDLYRGTYCSQD------VAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQ 353
+ SG++G +Y+G + + VAIK L+ E + KE E ++M V + +V +
Sbjct: 26 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELR-EATSPKANKEILDEAYVMASVDNPHVCR 84
Query: 354 FIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIH 413
+G C ++ ++T+ M G + DY+ + K LL + ++KGMNYL ++H
Sbjct: 85 LLGICLTS-TVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVH 143
Query: 414 RDLKAANLLMDENEVVKVADFGVAR-VKAQSGVMTAETGT--YRWMAPEVIEHKPYDHKA 470
RDL A N+L+ + VK+ DFG+A+ + A+ AE G +WMA E I H+ Y H++
Sbjct: 144 RDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQS 203
Query: 471 DVFSFGIVLWELLT-GKLPYE 490
DV+S+G+ +WEL+T G PY+
Sbjct: 204 DVWSYGVTVWELMTFGSKPYD 224
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 119 bits (299), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 69/201 (34%), Positives = 115/201 (57%), Gaps = 12/201 (5%)
Query: 300 VASGSYGDLYRGTYCSQD------VAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQ 353
+ SG++G +Y+G + + VAIK L+ E + KE E ++M V + +V +
Sbjct: 30 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELR-EATSPKANKEILDEAYVMASVDNPHVCR 88
Query: 354 FIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIH 413
+G C ++ ++T+ M G + DY+ + K LL + ++KGMNYL ++H
Sbjct: 89 LLGICLTS-TVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVH 147
Query: 414 RDLKAANLLMDENEVVKVADFGVAR-VKAQSGVMTAETGT--YRWMAPEVIEHKPYDHKA 470
RDL A N+L+ + VK+ DFG+A+ + A+ AE G +WMA E I H+ Y H++
Sbjct: 148 RDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQS 207
Query: 471 DVFSFGIVLWELLT-GKLPYE 490
DV+S+G+ +WEL+T G PY+
Sbjct: 208 DVWSYGVTVWELMTFGSKPYD 228
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 119 bits (299), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 69/201 (34%), Positives = 115/201 (57%), Gaps = 12/201 (5%)
Query: 300 VASGSYGDLYRGTYCSQD------VAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQ 353
+ SG++G +Y+G + + VAIK L+ E + KE E ++M V + +V +
Sbjct: 48 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELR-EATSPKANKEILDEAYVMASVDNPHVCR 106
Query: 354 FIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIH 413
+G C ++ ++T+ M G + DY+ + K LL + ++KGMNYL ++H
Sbjct: 107 LLGICLTS-TVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVH 165
Query: 414 RDLKAANLLMDENEVVKVADFGVAR-VKAQSGVMTAETGT--YRWMAPEVIEHKPYDHKA 470
RDL A N+L+ + VK+ DFG+A+ + A+ AE G +WMA E I H+ Y H++
Sbjct: 166 RDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQS 225
Query: 471 DVFSFGIVLWELLT-GKLPYE 490
DV+S+G+ +WEL+T G PY+
Sbjct: 226 DVWSYGVTVWELMTFGSKPYD 246
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 119 bits (299), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 69/201 (34%), Positives = 115/201 (57%), Gaps = 12/201 (5%)
Query: 300 VASGSYGDLYRGTYCSQD------VAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQ 353
+ SG++G +Y+G + + VAIK L+ E + KE E ++M V + +V +
Sbjct: 23 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELR-EATSPKANKEILDEAYVMASVDNPHVCR 81
Query: 354 FIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIH 413
+G C ++ ++T+ M G + DY+ + K LL + ++KGMNYL ++H
Sbjct: 82 LLGICLTS-TVQLITQLMPFGXLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVH 140
Query: 414 RDLKAANLLMDENEVVKVADFGVAR-VKAQSGVMTAETGT--YRWMAPEVIEHKPYDHKA 470
RDL A N+L+ + VK+ DFG+A+ + A+ AE G +WMA E I H+ Y H++
Sbjct: 141 RDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQS 200
Query: 471 DVFSFGIVLWELLT-GKLPYE 490
DV+S+G+ +WEL+T G PY+
Sbjct: 201 DVWSYGVTVWELMTFGSKPYD 221
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 119 bits (299), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 77/239 (32%), Positives = 118/239 (49%), Gaps = 28/239 (11%)
Query: 278 KIPNDGTDVWEIDPKHLKFGSKVASGSYGDLYRG-------TYCSQDVAIKVLKPERINS 330
++P D + WE LK G + G++G + T + VA+K+LK +S
Sbjct: 14 RLPYDASK-WEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHS 72
Query: 331 DMQKEFAQEVFIMRKVRHKNVVQFIGACTKPPS-LCIVTEFMSGGSVYDYLHKLKGVF-- 387
+ + ++ ++ H NVV +GACTKP L ++ EF G++ YL + F
Sbjct: 73 EHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVP 132
Query: 388 -------------KLPSLLKVAIDVSKGMNYLHQNNIIHRDLKAANLLMDENEVVKVADF 434
L L+ + V+KGM +L IHRDL A N+L+ E VVK+ DF
Sbjct: 133 YKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDF 192
Query: 435 GVAR--VKAQSGVMTAETGT-YRWMAPEVIEHKPYDHKADVFSFGIVLWELLT-GKLPY 489
G+AR K V + +WMAPE I + Y ++DV+SFG++LWE+ + G PY
Sbjct: 193 GLARDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPY 251
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 119 bits (299), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 77/239 (32%), Positives = 118/239 (49%), Gaps = 28/239 (11%)
Query: 278 KIPNDGTDVWEIDPKHLKFGSKVASGSYGDLYRG-------TYCSQDVAIKVLKPERINS 330
++P D + WE LK G + G++G + T + VA+K+LK +S
Sbjct: 14 RLPYDASK-WEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHS 72
Query: 331 DMQKEFAQEVFIMRKVRHKNVVQFIGACTKPPS-LCIVTEFMSGGSVYDYLHKLKGVF-- 387
+ + ++ ++ H NVV +GACTKP L ++ EF G++ YL + F
Sbjct: 73 EHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVP 132
Query: 388 -------------KLPSLLKVAIDVSKGMNYLHQNNIIHRDLKAANLLMDENEVVKVADF 434
L L+ + V+KGM +L IHRDL A N+L+ E VVK+ DF
Sbjct: 133 YKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDF 192
Query: 435 GVAR--VKAQSGVMTAETGT-YRWMAPEVIEHKPYDHKADVFSFGIVLWELLT-GKLPY 489
G+AR K V + +WMAPE I + Y ++DV+SFG++LWE+ + G PY
Sbjct: 193 GLARDIYKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPY 251
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 119 bits (298), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 69/201 (34%), Positives = 115/201 (57%), Gaps = 12/201 (5%)
Query: 300 VASGSYGDLYRGTYCSQD------VAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQ 353
+ SG++G +Y+G + + VAIK L+ E + KE E ++M V + +V +
Sbjct: 17 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELR-EATSPKANKEILDEAYVMASVDNPHVCR 75
Query: 354 FIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIH 413
+G C ++ ++T+ M G + DY+ + K LL + ++KGMNYL ++H
Sbjct: 76 LLGICLTS-TVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVH 134
Query: 414 RDLKAANLLMDENEVVKVADFGVAR-VKAQSGVMTAETGT--YRWMAPEVIEHKPYDHKA 470
RDL A N+L+ + VK+ DFG+A+ + A+ AE G +WMA E I H+ Y H++
Sbjct: 135 RDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQS 194
Query: 471 DVFSFGIVLWELLT-GKLPYE 490
DV+S+G+ +WEL+T G PY+
Sbjct: 195 DVWSYGVTVWELMTFGSKPYD 215
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 119 bits (298), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 69/201 (34%), Positives = 115/201 (57%), Gaps = 12/201 (5%)
Query: 300 VASGSYGDLYRGTYCSQD------VAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQ 353
+ SG++G +Y+G + + VAIK L+ E + KE E ++M V + +V +
Sbjct: 23 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELR-EATSPKANKEILDEAYVMASVDNPHVCR 81
Query: 354 FIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIH 413
+G C ++ ++T+ M G + DY+ + K LL + ++KGMNYL ++H
Sbjct: 82 LLGICLTS-TVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVH 140
Query: 414 RDLKAANLLMDENEVVKVADFGVAR-VKAQSGVMTAETGT--YRWMAPEVIEHKPYDHKA 470
RDL A N+L+ + VK+ DFG+A+ + A+ AE G +WMA E I H+ Y H++
Sbjct: 141 RDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQS 200
Query: 471 DVFSFGIVLWELLT-GKLPYE 490
DV+S+G+ +WEL+T G PY+
Sbjct: 201 DVWSYGVTVWELMTFGSKPYD 221
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 119 bits (298), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 77/239 (32%), Positives = 118/239 (49%), Gaps = 28/239 (11%)
Query: 278 KIPNDGTDVWEIDPKHLKFGSKVASGSYGDLYRG-------TYCSQDVAIKVLKPERINS 330
++P D + WE LK G + G++G + T + VA+K+LK +S
Sbjct: 14 RLPYDASK-WEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHS 72
Query: 331 DMQKEFAQEVFIMRKVRHKNVVQFIGACTKPPS-LCIVTEFMSGGSVYDYLHKLKGVF-- 387
+ + ++ ++ H NVV +GACTKP L ++ EF G++ YL + F
Sbjct: 73 EHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVP 132
Query: 388 -------------KLPSLLKVAIDVSKGMNYLHQNNIIHRDLKAANLLMDENEVVKVADF 434
L L+ + V+KGM +L IHRDL A N+L+ E VVK+ DF
Sbjct: 133 YKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDF 192
Query: 435 GVAR--VKAQSGVMTAETGT-YRWMAPEVIEHKPYDHKADVFSFGIVLWELLT-GKLPY 489
G+AR K V + +WMAPE I + Y ++DV+SFG++LWE+ + G PY
Sbjct: 193 GLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPY 251
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 119 bits (297), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 77/239 (32%), Positives = 118/239 (49%), Gaps = 28/239 (11%)
Query: 278 KIPNDGTDVWEIDPKHLKFGSKVASGSYGDLYRG-------TYCSQDVAIKVLKPERINS 330
++P D + WE LK G + G++G + T + VA+K+LK +S
Sbjct: 51 RLPYDASK-WEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHS 109
Query: 331 DMQKEFAQEVFIMRKVRHKNVVQFIGACTKPPS-LCIVTEFMSGGSVYDYLHKLKGVF-- 387
+ + ++ ++ H NVV +GACTKP L ++ EF G++ YL + F
Sbjct: 110 EHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVP 169
Query: 388 -------------KLPSLLKVAIDVSKGMNYLHQNNIIHRDLKAANLLMDENEVVKVADF 434
L L+ + V+KGM +L IHRDL A N+L+ E VVK+ DF
Sbjct: 170 YKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDF 229
Query: 435 GVAR--VKAQSGVMTAETGT-YRWMAPEVIEHKPYDHKADVFSFGIVLWELLT-GKLPY 489
G+AR K V + +WMAPE I + Y ++DV+SFG++LWE+ + G PY
Sbjct: 230 GLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPY 288
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 119 bits (297), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 77/239 (32%), Positives = 118/239 (49%), Gaps = 28/239 (11%)
Query: 278 KIPNDGTDVWEIDPKHLKFGSKVASGSYGDLYRG-------TYCSQDVAIKVLKPERINS 330
++P D + WE LK G + G++G + T + VA+K+LK +S
Sbjct: 16 RLPYDASK-WEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHS 74
Query: 331 DMQKEFAQEVFIMRKVRHKNVVQFIGACTKPPS-LCIVTEFMSGGSVYDYLHKLKGVF-- 387
+ + ++ ++ H NVV +GACTKP L ++ EF G++ YL + F
Sbjct: 75 EHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVP 134
Query: 388 -------------KLPSLLKVAIDVSKGMNYLHQNNIIHRDLKAANLLMDENEVVKVADF 434
L L+ + V+KGM +L IHRDL A N+L+ E VVK+ DF
Sbjct: 135 YKEAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDF 194
Query: 435 GVAR--VKAQSGVMTAETGT-YRWMAPEVIEHKPYDHKADVFSFGIVLWELLT-GKLPY 489
G+AR K V + +WMAPE I + Y ++DV+SFG++LWE+ + G PY
Sbjct: 195 GLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPY 253
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 119 bits (297), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 71/212 (33%), Positives = 112/212 (52%), Gaps = 11/212 (5%)
Query: 288 EIDPKHLKFGSKVASGSYGDLYRG-----TYCSQDVAIKVLKPERINSDMQKEFAQEVFI 342
E+D ++ V +G +G++ G + VAIK LK +++F E I
Sbjct: 12 ELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVG-YTEKQRRDFLGEASI 70
Query: 343 MRKVRHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKG 402
M + H N+++ G TK + IVTE M GS+ +L K F + L+ + ++ G
Sbjct: 71 MGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQLVGMLRGIASG 130
Query: 403 MNYLHQNNIIHRDLKAANLLMDENEVVKVADFGVARVKAQ--SGVMTAETGT--YRWMAP 458
M YL +HRDL A N+L++ N V KV+DFG++RV T G RW +P
Sbjct: 131 MKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSP 190
Query: 459 EVIEHKPYDHKADVFSFGIVLWELLT-GKLPY 489
E I ++ + +DV+S+GIVLWE+++ G+ PY
Sbjct: 191 EAIAYRKFTSASDVWSYGIVLWEVMSYGERPY 222
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 119 bits (297), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 71/212 (33%), Positives = 112/212 (52%), Gaps = 11/212 (5%)
Query: 288 EIDPKHLKFGSKVASGSYGDLYRG-----TYCSQDVAIKVLKPERINSDMQKEFAQEVFI 342
E+D ++ V +G +G++ G + VAIK LK +++F E I
Sbjct: 41 ELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVG-YTEKQRRDFLGEASI 99
Query: 343 MRKVRHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKG 402
M + H N+++ G TK + IVTE M GS+ +L K F + L+ + ++ G
Sbjct: 100 MGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQLVGMLRGIASG 159
Query: 403 MNYLHQNNIIHRDLKAANLLMDENEVVKVADFGVARVKAQ--SGVMTAETGT--YRWMAP 458
M YL +HRDL A N+L++ N V KV+DFG++RV T G RW +P
Sbjct: 160 MKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSP 219
Query: 459 EVIEHKPYDHKADVFSFGIVLWELLT-GKLPY 489
E I ++ + +DV+S+GIVLWE+++ G+ PY
Sbjct: 220 EAIAYRKFTSASDVWSYGIVLWEVMSYGERPY 251
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 119 bits (297), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 71/212 (33%), Positives = 112/212 (52%), Gaps = 11/212 (5%)
Query: 288 EIDPKHLKFGSKVASGSYGDLYRG-----TYCSQDVAIKVLKPERINSDMQKEFAQEVFI 342
E+D ++ V +G +G++ G + VAIK LK +++F E I
Sbjct: 41 ELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVG-YTEKQRRDFLGEASI 99
Query: 343 MRKVRHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKG 402
M + H N+++ G TK + IVTE M GS+ +L K F + L+ + ++ G
Sbjct: 100 MGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQLVGMLRGIASG 159
Query: 403 MNYLHQNNIIHRDLKAANLLMDENEVVKVADFGVARVKAQS--GVMTAETGT--YRWMAP 458
M YL +HRDL A N+L++ N V KV+DFG++RV T G RW +P
Sbjct: 160 MKYLSDMGAVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSP 219
Query: 459 EVIEHKPYDHKADVFSFGIVLWELLT-GKLPY 489
E I ++ + +DV+S+GIVLWE+++ G+ PY
Sbjct: 220 EAIAYRKFTSASDVWSYGIVLWEVMSYGERPY 251
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 118 bits (296), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 71/237 (29%), Positives = 120/237 (50%), Gaps = 40/237 (16%)
Query: 287 WEIDPKHLKFGSKVASGSYGDLYRGTYCSQD---------VAIKVLKPERINSDMQKEFA 337
WE L G + G++G + D VA+K+LK + D+ +
Sbjct: 30 WEFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLS-DLV 88
Query: 338 QEVFIMRKV-RHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLK--------GVFK 388
E+ +M+ + +HKN++ +GACT+ L ++ + S G++ +YL + + +
Sbjct: 89 SEMEMMKMIGKHKNIINLLGACTQDGPLYVIVAYASKGNLREYLRARRPPGMEYSYDINR 148
Query: 389 LPS-------LLKVAIDVSKGMNYLHQNNIIHRDLKAANLLMDENEVVKVADFGVAR--- 438
+P L+ +++GM YL IHRDL A N+L+ EN V+K+ADFG+AR
Sbjct: 149 VPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDIN 208
Query: 439 -----VKAQSGVMTAETGTYRWMAPEVIEHKPYDHKADVFSFGIVLWELLT-GKLPY 489
K +G + +WMAPE + + Y H++DV+SFG+++WE+ T G PY
Sbjct: 209 NIDYYKKTTNGRLPV-----KWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPY 260
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 118 bits (296), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 69/201 (34%), Positives = 114/201 (56%), Gaps = 12/201 (5%)
Query: 300 VASGSYGDLYRGTYCSQD------VAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQ 353
+ SG++G +Y+G + + VAIK L+ E + KE E ++M V + +V +
Sbjct: 25 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELR-EATSPKANKEILDEAYVMASVDNPHVCR 83
Query: 354 FIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIH 413
+G C ++ ++T+ M G + DY+ + K LL + ++KGMNYL ++H
Sbjct: 84 LLGICLTS-TVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVH 142
Query: 414 RDLKAANLLMDENEVVKVADFGVAR-VKAQSGVMTAETGT--YRWMAPEVIEHKPYDHKA 470
RDL A N+L+ + VK+ DFG A+ + A+ AE G +WMA E I H+ Y H++
Sbjct: 143 RDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQS 202
Query: 471 DVFSFGIVLWELLT-GKLPYE 490
DV+S+G+ +WEL+T G PY+
Sbjct: 203 DVWSYGVTVWELMTFGSKPYD 223
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 118 bits (296), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 69/201 (34%), Positives = 114/201 (56%), Gaps = 12/201 (5%)
Query: 300 VASGSYGDLYRGTYCSQD------VAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQ 353
+ SG++G +Y+G + + VAIK L+ E + KE E ++M V + +V +
Sbjct: 23 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELR-EATSPKANKEILDEAYVMASVDNPHVCR 81
Query: 354 FIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIH 413
+G C ++ ++T+ M G + DY+ + K LL + ++KGMNYL ++H
Sbjct: 82 LLGICLTS-TVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVH 140
Query: 414 RDLKAANLLMDENEVVKVADFGVAR-VKAQSGVMTAETGT--YRWMAPEVIEHKPYDHKA 470
RDL A N+L+ + VK+ DFG A+ + A+ AE G +WMA E I H+ Y H++
Sbjct: 141 RDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQS 200
Query: 471 DVFSFGIVLWELLT-GKLPYE 490
DV+S+G+ +WEL+T G PY+
Sbjct: 201 DVWSYGVTVWELMTFGSKPYD 221
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 118 bits (296), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 73/216 (33%), Positives = 112/216 (51%), Gaps = 11/216 (5%)
Query: 288 EIDPKHLKFGSKVASGSYGDLYRGTYC-----SQDVAIKVLKPERINSDMQKEFAQEVFI 342
EI+ + + +G +G++ G VAIK LK +++F E I
Sbjct: 18 EIEASCITIERVIGAGEFGEVCSGRLKLPGKRELPVAIKTLKVG-YTEKQRRDFLGEASI 76
Query: 343 MRKVRHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKG 402
M + H N++ G TK + IVTE+M GS+ +L K G F + L+ + +S G
Sbjct: 77 MGQFDHPNIIHLEGVVTKSKPVMIVTEYMENGSLDTFLKKNDGQFTVIQLVGMLRGISAG 136
Query: 403 MNYLHQNNIIHRDLKAANLLMDENEVVKVADFGVARVKAQ--SGVMTAETGT--YRWMAP 458
M YL +HRDL A N+L++ N V KV+DFG++RV T G RW AP
Sbjct: 137 MKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTAP 196
Query: 459 EVIEHKPYDHKADVFSFGIVLWELLT-GKLPYEYLT 493
E I + + +DV+S+GIV+WE+++ G+ PY +T
Sbjct: 197 EAIAFRKFTSASDVWSYGIVMWEVVSYGERPYWEMT 232
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 118 bits (295), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 76/238 (31%), Positives = 117/238 (49%), Gaps = 27/238 (11%)
Query: 278 KIPNDGTDVWEIDPKHLKFGSKVASGSYGDLYRG-------TYCSQDVAIKVLKPERINS 330
++P D + WE L G + G++G + T + VA+K+LK +S
Sbjct: 15 RLPYDASK-WEFPRDRLNLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHS 73
Query: 331 DMQKEFAQEVFIMRKVRHKNVVQFIGACTKPPS-LCIVTEFMSGGSVYDYLHKLKGVF-- 387
+ + ++ ++ H NVV +GACTKP L ++ EF G++ YL + F
Sbjct: 74 EHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVP 133
Query: 388 ------------KLPSLLKVAIDVSKGMNYLHQNNIIHRDLKAANLLMDENEVVKVADFG 435
L L+ + V+KGM +L IHRDL A N+L+ E VVK+ DFG
Sbjct: 134 YKTPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFG 193
Query: 436 VAR--VKAQSGVMTAETGT-YRWMAPEVIEHKPYDHKADVFSFGIVLWELLT-GKLPY 489
+AR K V + +WMAPE I + Y ++DV+SFG++LWE+ + G PY
Sbjct: 194 LARDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPY 251
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 118 bits (295), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 69/201 (34%), Positives = 114/201 (56%), Gaps = 12/201 (5%)
Query: 300 VASGSYGDLYRGTYCSQD------VAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQ 353
+ SG++G +Y+G + + VAIK L+ E + KE E ++M V + +V +
Sbjct: 30 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELR-EATSPKANKEILDEAYVMASVDNPHVCR 88
Query: 354 FIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIH 413
+G C ++ ++T+ M G + DY+ + K LL + ++KGMNYL ++H
Sbjct: 89 LLGICLTS-TVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVH 147
Query: 414 RDLKAANLLMDENEVVKVADFGVAR-VKAQSGVMTAETGT--YRWMAPEVIEHKPYDHKA 470
RDL A N+L+ + VK+ DFG A+ + A+ AE G +WMA E I H+ Y H++
Sbjct: 148 RDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQS 207
Query: 471 DVFSFGIVLWELLT-GKLPYE 490
DV+S+G+ +WEL+T G PY+
Sbjct: 208 DVWSYGVTVWELMTFGSKPYD 228
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 118 bits (295), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 76/235 (32%), Positives = 117/235 (49%), Gaps = 24/235 (10%)
Query: 278 KIPNDGTDVWEIDPKHLKFGSKVASGSYGDLYRG-------TYCSQDVAIKVLKPERINS 330
++P D + WE L G + G++G + T + VA+K+LK +S
Sbjct: 14 RLPYDASK-WEFPRDRLNLGKPLGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHS 72
Query: 331 DMQKEFAQEVFIMRKVRHKNVVQFIGACTKPPS-LCIVTEFMSGGSVYDYLHKLKGVF-- 387
+ + ++ ++ H NVV +GACTKP L ++ EF G++ YL + F
Sbjct: 73 EHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVP 132
Query: 388 ---------KLPSLLKVAIDVSKGMNYLHQNNIIHRDLKAANLLMDENEVVKVADFGVAR 438
L L+ + V+KGM +L IHRDL A N+L+ E VVK+ DFG+AR
Sbjct: 133 YKDLYKDFLTLEHLIXYSFQVAKGMEFLASRKXIHRDLAARNILLSEKNVVKIXDFGLAR 192
Query: 439 --VKAQSGVMTAETGT-YRWMAPEVIEHKPYDHKADVFSFGIVLWELLT-GKLPY 489
K V + +WMAPE I + Y ++DV+SFG++LWE+ + G PY
Sbjct: 193 DIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPY 247
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 118 bits (295), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 71/237 (29%), Positives = 120/237 (50%), Gaps = 40/237 (16%)
Query: 287 WEIDPKHLKFGSKVASGSYGDLYRGTYCSQD---------VAIKVLKPERINSDMQKEFA 337
WE L G + G++G + D VA+K+LK + D+ +
Sbjct: 30 WEFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLS-DLV 88
Query: 338 QEVFIMRKV-RHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLK--------GVFK 388
E+ +M+ + +HKN++ +GACT+ L ++ + S G++ +YL + + +
Sbjct: 89 SEMEMMKMIGKHKNIINLLGACTQDGPLYVIVGYASKGNLREYLRARRPPGMEYSYDINR 148
Query: 389 LPS-------LLKVAIDVSKGMNYLHQNNIIHRDLKAANLLMDENEVVKVADFGVAR--- 438
+P L+ +++GM YL IHRDL A N+L+ EN V+K+ADFG+AR
Sbjct: 149 VPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDIN 208
Query: 439 -----VKAQSGVMTAETGTYRWMAPEVIEHKPYDHKADVFSFGIVLWELLT-GKLPY 489
K +G + +WMAPE + + Y H++DV+SFG+++WE+ T G PY
Sbjct: 209 NIDYYKKTTNGRLPV-----KWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPY 260
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 118 bits (295), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 74/216 (34%), Positives = 110/216 (50%), Gaps = 11/216 (5%)
Query: 288 EIDPKHLKFGSKVASGSYGDLYRGTY---CSQDV--AIKVLKPERINSDMQKEFAQEVFI 342
EI+ + + SG G++ G +DV AIK LK +++F E I
Sbjct: 45 EIEASRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAG-YTERQRRDFLSEASI 103
Query: 343 MRKVRHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKG 402
M + H N+++ G T+ IVTE+M GS+ +L G F + L+ + V G
Sbjct: 104 MGQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSLDTFLRTHDGQFTIMQLVGMLRGVGAG 163
Query: 403 MNYLHQNNIIHRDLKAANLLMDENEVVKVADFGVARVKAQ----SGVMTAETGTYRWMAP 458
M YL +HRDL A N+L+D N V KV+DFG++RV + T RW AP
Sbjct: 164 MRYLSDLGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAXTTTGGKIPIRWTAP 223
Query: 459 EVIEHKPYDHKADVFSFGIVLWELLT-GKLPYEYLT 493
E I + + +DV+SFG+V+WE+L G+ PY +T
Sbjct: 224 EAIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNMT 259
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 118 bits (295), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 68/201 (33%), Positives = 115/201 (57%), Gaps = 12/201 (5%)
Query: 300 VASGSYGDLYRGTYCSQD------VAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQ 353
+ SG++G +Y+G + + VAIK L+ E + KE E ++M V + +V +
Sbjct: 20 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELR-EATSPKANKEILDEAYVMASVDNPHVCR 78
Query: 354 FIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIH 413
+G C ++ ++T+ M G + DY+ + K LL + +++GMNYL ++H
Sbjct: 79 LLGICLTS-TVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAEGMNYLEDRRLVH 137
Query: 414 RDLKAANLLMDENEVVKVADFGVAR-VKAQSGVMTAETGT--YRWMAPEVIEHKPYDHKA 470
RDL A N+L+ + VK+ DFG+A+ + A+ AE G +WMA E I H+ Y H++
Sbjct: 138 RDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQS 197
Query: 471 DVFSFGIVLWELLT-GKLPYE 490
DV+S+G+ +WEL+T G PY+
Sbjct: 198 DVWSYGVTVWELMTFGSKPYD 218
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 117 bits (294), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 68/201 (33%), Positives = 115/201 (57%), Gaps = 12/201 (5%)
Query: 300 VASGSYGDLYRGTYCSQD------VAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQ 353
++SG++G +Y+G + + VAIK L+ E + KE E ++M V + +V +
Sbjct: 30 LSSGAFGTVYKGLWIPEGEKVKIPVAIKELR-EATSPKANKEILDEAYVMASVDNPHVCR 88
Query: 354 FIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIH 413
+G C ++ ++ + M G + DY+ + K LL + ++KGMNYL ++H
Sbjct: 89 LLGICLTS-TVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVH 147
Query: 414 RDLKAANLLMDENEVVKVADFGVAR-VKAQSGVMTAETGT--YRWMAPEVIEHKPYDHKA 470
RDL A N+L+ + VK+ DFG+A+ + A+ AE G +WMA E I H+ Y H++
Sbjct: 148 RDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQS 207
Query: 471 DVFSFGIVLWELLT-GKLPYE 490
DV+S+G+ +WEL+T G PY+
Sbjct: 208 DVWSYGVTVWELMTFGSKPYD 228
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 117 bits (294), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 68/201 (33%), Positives = 114/201 (56%), Gaps = 12/201 (5%)
Query: 300 VASGSYGDLYRGTYCSQD------VAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQ 353
+ SG++G +Y+G + + VAI L+ E + KE E ++M V + +V +
Sbjct: 57 LGSGAFGTVYKGLWIPEGEKVKIPVAIMELR-EATSPKANKEILDEAYVMASVDNPHVCR 115
Query: 354 FIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIH 413
+G C ++ ++T+ M G + DY+ + K LL + ++KGMNYL ++H
Sbjct: 116 LLGICLTS-TVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVH 174
Query: 414 RDLKAANLLMDENEVVKVADFGVAR-VKAQSGVMTAETGT--YRWMAPEVIEHKPYDHKA 470
RDL A N+L+ + VK+ DFG+A+ + A+ AE G +WMA E I H+ Y H++
Sbjct: 175 RDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQS 234
Query: 471 DVFSFGIVLWELLT-GKLPYE 490
DV+S+G+ +WEL+T G PY+
Sbjct: 235 DVWSYGVTVWELMTFGSKPYD 255
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 117 bits (294), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 76/235 (32%), Positives = 117/235 (49%), Gaps = 24/235 (10%)
Query: 278 KIPNDGTDVWEIDPKHLKFGSKVASGSYGDLYRG-------TYCSQDVAIKVLKPERINS 330
++P D + WE L G + G++G + T + VA+K+LK +S
Sbjct: 14 RLPYDASK-WEFPRDRLNLGKPLGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHS 72
Query: 331 DMQKEFAQEVFIMRKVRHKNVVQFIGACTKPPS-LCIVTEFMSGGSVYDYLHKLKGVF-- 387
+ + ++ ++ H NVV +GACTKP L ++ EF G++ YL + F
Sbjct: 73 EHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVP 132
Query: 388 ---------KLPSLLKVAIDVSKGMNYLHQNNIIHRDLKAANLLMDENEVVKVADFGVAR 438
L L+ + V+KGM +L IHRDL A N+L+ E VVK+ DFG+AR
Sbjct: 133 YKDLYKDFLTLEHLICYSFQVAKGMEFLASRKXIHRDLAARNILLSEKNVVKICDFGLAR 192
Query: 439 --VKAQSGVMTAETGT-YRWMAPEVIEHKPYDHKADVFSFGIVLWELLT-GKLPY 489
K V + +WMAPE I + Y ++DV+SFG++LWE+ + G PY
Sbjct: 193 DIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPY 247
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 117 bits (294), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 68/201 (33%), Positives = 114/201 (56%), Gaps = 12/201 (5%)
Query: 300 VASGSYGDLYRGTYCSQD------VAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQ 353
+ SG++G +Y+G + + VAIK L+ E + KE E ++M V + +V +
Sbjct: 27 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELR-EATSPKANKEILDEAYVMASVDNPHVCR 85
Query: 354 FIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIH 413
+G C ++ ++ + M G + DY+ + K LL + ++KGMNYL ++H
Sbjct: 86 LLGICLTS-TVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVH 144
Query: 414 RDLKAANLLMDENEVVKVADFGVAR-VKAQSGVMTAETGT--YRWMAPEVIEHKPYDHKA 470
RDL A N+L+ + VK+ DFG+A+ + A+ AE G +WMA E I H+ Y H++
Sbjct: 145 RDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQS 204
Query: 471 DVFSFGIVLWELLT-GKLPYE 490
DV+S+G+ +WEL+T G PY+
Sbjct: 205 DVWSYGVTVWELMTFGSKPYD 225
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 117 bits (294), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 68/201 (33%), Positives = 114/201 (56%), Gaps = 12/201 (5%)
Query: 300 VASGSYGDLYRGTYCSQD------VAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQ 353
+ SG++G +Y+G + + VAIK L+ E + KE E ++M V + +V +
Sbjct: 25 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELR-EATSPKANKEILDEAYVMASVDNPHVCR 83
Query: 354 FIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIH 413
+G C ++ ++ + M G + DY+ + K LL + ++KGMNYL ++H
Sbjct: 84 LLGICLTS-TVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVH 142
Query: 414 RDLKAANLLMDENEVVKVADFGVAR-VKAQSGVMTAETGT--YRWMAPEVIEHKPYDHKA 470
RDL A N+L+ + VK+ DFG+A+ + A+ AE G +WMA E I H+ Y H++
Sbjct: 143 RDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQS 202
Query: 471 DVFSFGIVLWELLT-GKLPYE 490
DV+S+G+ +WEL+T G PY+
Sbjct: 203 DVWSYGVTVWELMTFGSKPYD 223
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 117 bits (294), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 68/201 (33%), Positives = 114/201 (56%), Gaps = 12/201 (5%)
Query: 300 VASGSYGDLYRGTYCSQD------VAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQ 353
+ SG++G +Y+G + + VAIK L+ E + KE E ++M V + +V +
Sbjct: 24 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELR-EATSPKANKEILDEAYVMASVDNPHVCR 82
Query: 354 FIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIH 413
+G C ++ ++ + M G + DY+ + K LL + ++KGMNYL ++H
Sbjct: 83 LLGICLTS-TVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVH 141
Query: 414 RDLKAANLLMDENEVVKVADFGVAR-VKAQSGVMTAETGT--YRWMAPEVIEHKPYDHKA 470
RDL A N+L+ + VK+ DFG+A+ + A+ AE G +WMA E I H+ Y H++
Sbjct: 142 RDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQS 201
Query: 471 DVFSFGIVLWELLT-GKLPYE 490
DV+S+G+ +WEL+T G PY+
Sbjct: 202 DVWSYGVTVWELMTFGSKPYD 222
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 117 bits (294), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 75/216 (34%), Positives = 110/216 (50%), Gaps = 11/216 (5%)
Query: 288 EIDPKHLKFGSKVASGSYGDLYRGTY---CSQDV--AIKVLKPERINSDMQKEFAQEVFI 342
EI+ + + SG G++ G +DV AIK LK +++F E I
Sbjct: 45 EIEASRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAG-YTERQRRDFLSEASI 103
Query: 343 MRKVRHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKG 402
M + H N+++ G T+ IVTE+M GS+ +L G F + L+ + V G
Sbjct: 104 MGQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSLDTFLRTHDGQFTIMQLVGMLRGVGAG 163
Query: 403 MNYLHQNNIIHRDLKAANLLMDENEVVKVADFGVARVKAQ--SGVMTAETGT--YRWMAP 458
M YL +HRDL A N+L+D N V KV+DFG++RV T G RW AP
Sbjct: 164 MRYLSDLGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAYTTTGGKIPIRWTAP 223
Query: 459 EVIEHKPYDHKADVFSFGIVLWELLT-GKLPYEYLT 493
E I + + +DV+SFG+V+WE+L G+ PY +T
Sbjct: 224 EAIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNMT 259
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 117 bits (294), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 68/201 (33%), Positives = 114/201 (56%), Gaps = 12/201 (5%)
Query: 300 VASGSYGDLYRGTYCSQD------VAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQ 353
+ SG++G +Y+G + + VAIK L+ E + KE E ++M V + +V +
Sbjct: 23 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELR-EATSPKANKEILDEAYVMASVDNPHVCR 81
Query: 354 FIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIH 413
+G C ++ ++ + M G + DY+ + K LL + ++KGMNYL ++H
Sbjct: 82 LLGICLTS-TVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVH 140
Query: 414 RDLKAANLLMDENEVVKVADFGVAR-VKAQSGVMTAETGT--YRWMAPEVIEHKPYDHKA 470
RDL A N+L+ + VK+ DFG+A+ + A+ AE G +WMA E I H+ Y H++
Sbjct: 141 RDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQS 200
Query: 471 DVFSFGIVLWELLT-GKLPYE 490
DV+S+G+ +WEL+T G PY+
Sbjct: 201 DVWSYGVTVWELMTFGSKPYD 221
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 117 bits (293), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 68/201 (33%), Positives = 114/201 (56%), Gaps = 12/201 (5%)
Query: 300 VASGSYGDLYRGTYCSQD------VAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQ 353
+ SG++G +Y+G + + VAIK L+ E + KE E ++M V + +V +
Sbjct: 26 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELR-EATSPKANKEILDEAYVMASVDNPHVCR 84
Query: 354 FIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIH 413
+G C ++ ++ + M G + DY+ + K LL + ++KGMNYL ++H
Sbjct: 85 LLGICLTS-TVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVH 143
Query: 414 RDLKAANLLMDENEVVKVADFGVAR-VKAQSGVMTAETGT--YRWMAPEVIEHKPYDHKA 470
RDL A N+L+ + VK+ DFG+A+ + A+ AE G +WMA E I H+ Y H++
Sbjct: 144 RDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQS 203
Query: 471 DVFSFGIVLWELLT-GKLPYE 490
DV+S+G+ +WEL+T G PY+
Sbjct: 204 DVWSYGVTVWELMTFGSKPYD 224
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 117 bits (293), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 73/226 (32%), Positives = 119/226 (52%), Gaps = 22/226 (9%)
Query: 289 IDPKHLKFGSKVASGSYGDLYRGTY----CSQDVAIKVLKPERINSDMQKEFAQEVFIMR 344
+D +KF + G++G + + D AIK +K E + D ++FA E+ ++
Sbjct: 12 LDWNDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMK-EYASKDDHRDFAGELEVLC 70
Query: 345 KV-RHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPS------------ 391
K+ H N++ +GAC L + E+ G++ D+L K + + P+
Sbjct: 71 KLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLS 130
Query: 392 ---LLKVAIDVSKGMNYLHQNNIIHRDLKAANLLMDENEVVKVADFGVARVKAQSGVMTA 448
LL A DV++GM+YL Q IHRDL A N+L+ EN V K+ADFG++R + T
Sbjct: 131 SQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVGENYVAKIADFGLSRGQEVYVKKTM 190
Query: 449 ETGTYRWMAPEVIEHKPYDHKADVFSFGIVLWELLT-GKLPYEYLT 493
RWMA E + + Y +DV+S+G++LWE+++ G PY +T
Sbjct: 191 GRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMT 236
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 117 bits (293), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 68/201 (33%), Positives = 114/201 (56%), Gaps = 12/201 (5%)
Query: 300 VASGSYGDLYRGTYCSQD------VAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQ 353
+ SG++G +Y+G + + VAIK L+ E + KE E ++M V + +V +
Sbjct: 24 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELR-EATSPKANKEILDEAYVMASVDNPHVCR 82
Query: 354 FIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIH 413
+G C ++ ++ + M G + DY+ + K LL + ++KGMNYL ++H
Sbjct: 83 LLGICLTS-TVQLIMQLMPFGXLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVH 141
Query: 414 RDLKAANLLMDENEVVKVADFGVAR-VKAQSGVMTAETGT--YRWMAPEVIEHKPYDHKA 470
RDL A N+L+ + VK+ DFG+A+ + A+ AE G +WMA E I H+ Y H++
Sbjct: 142 RDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQS 201
Query: 471 DVFSFGIVLWELLT-GKLPYE 490
DV+S+G+ +WEL+T G PY+
Sbjct: 202 DVWSYGVTVWELMTFGSKPYD 222
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 117 bits (293), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 70/201 (34%), Positives = 112/201 (55%), Gaps = 6/201 (2%)
Query: 299 KVASGSYGDLYRG--TYCSQDVAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQFIG 356
K+ GS+G++++G + VAIK++ E +++ QE+ ++ + V ++ G
Sbjct: 29 KIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDI-QQEITVLSQCDSPYVTKYYG 87
Query: 357 ACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDL 416
+ K L I+ E++ GGS D L G + + ++ KG++YLH IHRD+
Sbjct: 88 SYLKDTKLWIIMEYLGGGSALDLLEP--GPLDETQIATILREILKGLDYLHSEKKIHRDI 145
Query: 417 KAANLLMDENEVVKVADFGVARVKAQSGVMTAE-TGTYRWMAPEVIEHKPYDHKADVFSF 475
KAAN+L+ E+ VK+ADFGVA + + GT WMAPEVI+ YD KAD++S
Sbjct: 146 KAANVLLSEHGEVKLADFGVAGQLTDTQIKRNXFVGTPFWMAPEVIKQSAYDSKADIWSL 205
Query: 476 GIVLWELLTGKLPYEYLTPLQ 496
GI EL G+ P+ L P++
Sbjct: 206 GITAIELARGEPPHSELHPMK 226
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 117 bits (293), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 73/226 (32%), Positives = 119/226 (52%), Gaps = 22/226 (9%)
Query: 289 IDPKHLKFGSKVASGSYGDLYRGTY----CSQDVAIKVLKPERINSDMQKEFAQEVFIMR 344
+D +KF + G++G + + D AIK +K E + D ++FA E+ ++
Sbjct: 22 LDWNDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMK-EYASKDDHRDFAGELEVLC 80
Query: 345 KV-RHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPS------------ 391
K+ H N++ +GAC L + E+ G++ D+L K + + P+
Sbjct: 81 KLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLS 140
Query: 392 ---LLKVAIDVSKGMNYLHQNNIIHRDLKAANLLMDENEVVKVADFGVARVKAQSGVMTA 448
LL A DV++GM+YL Q IHRDL A N+L+ EN V K+ADFG++R + T
Sbjct: 141 SQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVGENYVAKIADFGLSRGQEVYVKKTM 200
Query: 449 ETGTYRWMAPEVIEHKPYDHKADVFSFGIVLWELLT-GKLPYEYLT 493
RWMA E + + Y +DV+S+G++LWE+++ G PY +T
Sbjct: 201 GRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMT 246
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 117 bits (293), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 77/232 (33%), Positives = 126/232 (54%), Gaps = 11/232 (4%)
Query: 270 MKSHPYHLKIPNDGTDVWEIDPKHLKFG-SKVASGSYGDLYRG--TYCSQDVAIKVLKPE 326
M P +++P ++ DP+ L ++ GS+G++++G Q VAIK++ E
Sbjct: 2 MAHSPVAVQVPGMQNNI--ADPEELFTKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLE 59
Query: 327 RINSDMQKEFAQEVFIMRKVRHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLK-G 385
+++ QE+ ++ + V ++ G+ K L I+ E++ GGS D L
Sbjct: 60 EAEDEIEDI-QQEITVLSQCDSSYVTKYYGSYLKGSKLWIIMEYLGGGSALDLLRAGPFD 118
Query: 386 VFKLPSLLKVAIDVSKGMNYLHQNNIIHRDLKAANLLMDENEVVKVADFGVARVKAQSGV 445
F++ ++LK ++ KG++YLH IHRD+KAAN+L+ E VK+ADFGVA + +
Sbjct: 119 EFQIATMLK---EILKGLDYLHSEKKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQI 175
Query: 446 M-TAETGTYRWMAPEVIEHKPYDHKADVFSFGIVLWELLTGKLPYEYLTPLQ 496
GT WMAPEVI+ YD KAD++S GI EL G+ P + P++
Sbjct: 176 KRNTFVGTPFWMAPEVIQQSAYDSKADIWSLGITAIELAKGEPPNSDMHPMR 227
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 116 bits (291), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 70/201 (34%), Positives = 112/201 (55%), Gaps = 6/201 (2%)
Query: 299 KVASGSYGDLYRG--TYCSQDVAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQFIG 356
K+ GS+G++++G + VAIK++ E +++ QE+ ++ + V ++ G
Sbjct: 14 KIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDI-QQEITVLSQCDSPYVTKYYG 72
Query: 357 ACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDL 416
+ K L I+ E++ GGS D L G + + ++ KG++YLH IHRD+
Sbjct: 73 SYLKDTKLWIIMEYLGGGSALDLLEP--GPLDETQIATILREILKGLDYLHSEKKIHRDI 130
Query: 417 KAANLLMDENEVVKVADFGVARVKAQSGVM-TAETGTYRWMAPEVIEHKPYDHKADVFSF 475
KAAN+L+ E+ VK+ADFGVA + + GT WMAPEVI+ YD KAD++S
Sbjct: 131 KAANVLLSEHGEVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIKQSAYDSKADIWSL 190
Query: 476 GIVLWELLTGKLPYEYLTPLQ 496
GI EL G+ P+ L P++
Sbjct: 191 GITAIELARGEPPHSELHPMK 211
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 116 bits (291), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 70/202 (34%), Positives = 112/202 (55%), Gaps = 6/202 (2%)
Query: 299 KVASGSYGDLYRG--TYCSQDVAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQFIG 356
K+ GS+G++++G + VAIK++ E +++ QE+ ++ + V ++ G
Sbjct: 34 KIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDI-QQEITVLSQCDSPYVTKYYG 92
Query: 357 ACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDL 416
+ K L I+ E++ GGS D L G + + ++ KG++YLH IHRD+
Sbjct: 93 SYLKDTKLWIIMEYLGGGSALDLLEP--GPLDETQIATILREILKGLDYLHSEKKIHRDI 150
Query: 417 KAANLLMDENEVVKVADFGVARVKAQSGVM-TAETGTYRWMAPEVIEHKPYDHKADVFSF 475
KAAN+L+ E+ VK+ADFGVA + + GT WMAPEVI+ YD KAD++S
Sbjct: 151 KAANVLLSEHGEVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIKQSAYDSKADIWSL 210
Query: 476 GIVLWELLTGKLPYEYLTPLQA 497
GI EL G+ P+ L P++
Sbjct: 211 GITAIELARGEPPHSELHPMKV 232
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 116 bits (291), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 70/201 (34%), Positives = 112/201 (55%), Gaps = 6/201 (2%)
Query: 299 KVASGSYGDLYRG--TYCSQDVAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQFIG 356
K+ GS+G++++G + VAIK++ E +++ QE+ ++ + V ++ G
Sbjct: 14 KIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDI-QQEITVLSQCDSPYVTKYYG 72
Query: 357 ACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDL 416
+ K L I+ E++ GGS D L G + + ++ KG++YLH IHRD+
Sbjct: 73 SYLKDTKLWIIMEYLGGGSALDLLEP--GPLDETQIATILREILKGLDYLHSEKKIHRDI 130
Query: 417 KAANLLMDENEVVKVADFGVARVKAQSGVMTAE-TGTYRWMAPEVIEHKPYDHKADVFSF 475
KAAN+L+ E+ VK+ADFGVA + + GT WMAPEVI+ YD KAD++S
Sbjct: 131 KAANVLLSEHGEVKLADFGVAGQLTDTQIKRNXFVGTPFWMAPEVIKQSAYDSKADIWSL 190
Query: 476 GIVLWELLTGKLPYEYLTPLQ 496
GI EL G+ P+ L P++
Sbjct: 191 GITAIELARGEPPHSELHPMK 211
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 116 bits (291), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 72/213 (33%), Positives = 117/213 (54%), Gaps = 7/213 (3%)
Query: 289 IDPKHLKFG-SKVASGSYGDLYRG--TYCSQDVAIKVLKPERINSDMQKEFAQEVFIMRK 345
+DP+ L ++ GS+G++Y+G + + VAIK++ E +++ QE+ ++ +
Sbjct: 15 VDPEELFTKLDRIGKGSFGEVYKGIDNHTKEVVAIKIIDLEEAEDEIEDI-QQEITVLSQ 73
Query: 346 VRHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNY 405
+ ++ G+ K L I+ E++ GGS D L G + + + ++ KG++Y
Sbjct: 74 CDSPYITRYFGSYLKSTKLWIIMEYLGGGSALDLLKP--GPLEETYIATILREILKGLDY 131
Query: 406 LHQNNIIHRDLKAANLLMDENEVVKVADFGVARVKAQSGV-MTAETGTYRWMAPEVIEHK 464
LH IHRD+KAAN+L+ E VK+ADFGVA + + GT WMAPEVI+
Sbjct: 132 LHSERKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNXFVGTPFWMAPEVIKQS 191
Query: 465 PYDHKADVFSFGIVLWELLTGKLPYEYLTPLQA 497
YD KAD++S GI EL G+ P L P++
Sbjct: 192 AYDFKADIWSLGITAIELAKGEPPNSDLHPMRV 224
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 116 bits (290), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 68/201 (33%), Positives = 113/201 (56%), Gaps = 12/201 (5%)
Query: 300 VASGSYGDLYRGTYCSQD------VAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQ 353
+ SG++G +Y+G + + VAIK L+ E + KE E ++M V + +V +
Sbjct: 25 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELR-EATSPKANKEILDEAYVMASVDNPHVCR 83
Query: 354 FIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIH 413
+G C ++ ++ + M G + DY+ + K LL + ++KGMNYL ++H
Sbjct: 84 LLGICLTS-TVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVH 142
Query: 414 RDLKAANLLMDENEVVKVADFGVAR-VKAQSGVMTAETGT--YRWMAPEVIEHKPYDHKA 470
RDL A N+L+ + VK+ DFG A+ + A+ AE G +WMA E I H+ Y H++
Sbjct: 143 RDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQS 202
Query: 471 DVFSFGIVLWELLT-GKLPYE 490
DV+S+G+ +WEL+T G PY+
Sbjct: 203 DVWSYGVTVWELMTFGSKPYD 223
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 116 bits (290), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 68/201 (33%), Positives = 113/201 (56%), Gaps = 12/201 (5%)
Query: 300 VASGSYGDLYRGTYCSQD------VAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQ 353
+ SG++G +Y+G + + VAIK L+ E + KE E ++M V + +V +
Sbjct: 27 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELR-EATSPKANKEILDEAYVMASVDNPHVCR 85
Query: 354 FIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIH 413
+G C ++ ++ + M G + DY+ + K LL + ++KGMNYL ++H
Sbjct: 86 LLGICLTS-TVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVH 144
Query: 414 RDLKAANLLMDENEVVKVADFGVAR-VKAQSGVMTAETGT--YRWMAPEVIEHKPYDHKA 470
RDL A N+L+ + VK+ DFG A+ + A+ AE G +WMA E I H+ Y H++
Sbjct: 145 RDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQS 204
Query: 471 DVFSFGIVLWELLT-GKLPYE 490
DV+S+G+ +WEL+T G PY+
Sbjct: 205 DVWSYGVTVWELMTFGSKPYD 225
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 116 bits (290), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 68/201 (33%), Positives = 113/201 (56%), Gaps = 12/201 (5%)
Query: 300 VASGSYGDLYRGTYCSQD------VAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQ 353
+ SG++G +Y+G + + VAIK L+ E + KE E ++M V + +V +
Sbjct: 25 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELR-EATSPKANKEILDEAYVMASVDNPHVCR 83
Query: 354 FIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIH 413
+G C ++ ++ + M G + DY+ + K LL + ++KGMNYL ++H
Sbjct: 84 LLGICLTS-TVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVH 142
Query: 414 RDLKAANLLMDENEVVKVADFGVAR-VKAQSGVMTAETGT--YRWMAPEVIEHKPYDHKA 470
RDL A N+L+ + VK+ DFG A+ + A+ AE G +WMA E I H+ Y H++
Sbjct: 143 RDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQS 202
Query: 471 DVFSFGIVLWELLT-GKLPYE 490
DV+S+G+ +WEL+T G PY+
Sbjct: 203 DVWSYGVTVWELMTFGSKPYD 223
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 115 bits (288), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 72/226 (31%), Positives = 119/226 (52%), Gaps = 22/226 (9%)
Query: 289 IDPKHLKFGSKVASGSYGDLYRGTY----CSQDVAIKVLKPERINSDMQKEFAQEVFIMR 344
+D +KF + G++G + + D AIK +K E + D ++FA E+ ++
Sbjct: 19 LDWNDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMK-EYASKDDHRDFAGELEVLC 77
Query: 345 KV-RHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPS------------ 391
K+ H N++ +GAC L + E+ G++ D+L K + + P+
Sbjct: 78 KLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLS 137
Query: 392 ---LLKVAIDVSKGMNYLHQNNIIHRDLKAANLLMDENEVVKVADFGVARVKAQSGVMTA 448
LL A DV++GM+YL Q IHR+L A N+L+ EN V K+ADFG++R + T
Sbjct: 138 SQQLLHFAADVARGMDYLSQKQFIHRNLAARNILVGENYVAKIADFGLSRGQEVYVKKTM 197
Query: 449 ETGTYRWMAPEVIEHKPYDHKADVFSFGIVLWELLT-GKLPYEYLT 493
RWMA E + + Y +DV+S+G++LWE+++ G PY +T
Sbjct: 198 GRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMT 243
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 114 bits (285), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 72/202 (35%), Positives = 107/202 (52%), Gaps = 7/202 (3%)
Query: 299 KVASGSYGDLYRGTY--CSQDVAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQFIG 356
K+ GSYG +Y+ + Q VAIK + + SD+Q E +E+ IM++ +VV++ G
Sbjct: 36 KLGEGSYGSVYKAIHKETGQIVAIKQVP---VESDLQ-EIIKEISIMQQCDSPHVVKYYG 91
Query: 357 ACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDL 416
+ K L IV E+ GSV D + + + KG+ YLH IHRD+
Sbjct: 92 SYFKNTDLWIVMEYCGAGSVSDIIRLRNKTLTEDEIATILQSTLKGLEYLHFMRKIHRDI 151
Query: 417 KAANLLMDENEVVKVADFGVA-RVKAQSGVMTAETGTYRWMAPEVIEHKPYDHKADVFSF 475
KA N+L++ K+ADFGVA ++ GT WMAPEVI+ Y+ AD++S
Sbjct: 152 KAGNILLNTEGHAKLADFGVAGQLTDXMAKRNXVIGTPFWMAPEVIQEIGYNCVADIWSL 211
Query: 476 GIVLWELLTGKLPYEYLTPLQA 497
GI E+ GK PY + P++A
Sbjct: 212 GITAIEMAEGKPPYADIHPMRA 233
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 114 bits (285), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 61/196 (31%), Positives = 117/196 (59%), Gaps = 4/196 (2%)
Query: 299 KVASGSYGD--LYRGTYCSQDVAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQFIG 356
K+ GS+G L + T + IK + R++S ++E +EV ++ ++H N+VQ+
Sbjct: 31 KIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQYRE 90
Query: 357 ACTKPPSLCIVTEFMSGGSVYDYLHKLKGV-FKLPSLLKVAIDVSKGMNYLHQNNIIHRD 415
+ + SL IV ++ GG ++ ++ KGV F+ +L + + + ++H I+HRD
Sbjct: 91 SFEENGSLYIVMDYCEGGDLFKRINAQKGVLFQEDQILDWFVQICLALKHVHDRKILHRD 150
Query: 416 LKAANLLMDENEVVKVADFGVARV-KAQSGVMTAETGTYRWMAPEVIEHKPYDHKADVFS 474
+K+ N+ + ++ V++ DFG+ARV + + A GT +++PE+ E+KPY++K+D+++
Sbjct: 151 IKSQNIFLTKDGTVQLGDFGIARVLNSTVELARACIGTPYYLSPEICENKPYNNKSDIWA 210
Query: 475 FGIVLWELLTGKLPYE 490
G VL+EL T K +E
Sbjct: 211 LGCVLYELCTLKHAFE 226
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 112 bits (281), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 63/194 (32%), Positives = 105/194 (54%), Gaps = 4/194 (2%)
Query: 300 VASGSYGD--LYRGTYCSQDVAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQFIGA 357
+ G++ L R ++VAIK++ ++N ++ +EV IM+ + H N+V+
Sbjct: 23 IGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEV 82
Query: 358 CTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDLK 417
+L ++ E+ SGG V+DYL G K + + Y HQ I+HRDLK
Sbjct: 83 IETEKTLYLIMEYASGGEVFDYLVA-HGRMKEKEARSKFRQIVSAVQYCHQKRIVHRDLK 141
Query: 418 AANLLMDENEVVKVADFGVARVKAQSGVMTAETGTYRWMAPEVIEHKPYDH-KADVFSFG 476
A NLL+D + +K+ADFG + G + A G + APE+ + K YD + DV+S G
Sbjct: 142 AENLLLDADMNIKIADFGFSNEFTVGGKLDAFCGAPPYAAPELFQGKKYDGPEVDVWSLG 201
Query: 477 IVLWELLTGKLPYE 490
++L+ L++G LP++
Sbjct: 202 VILYTLVSGSLPFD 215
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 112 bits (280), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 81/281 (28%), Positives = 134/281 (47%), Gaps = 43/281 (15%)
Query: 243 KEVLKLERQGWPSHRSSSPTSEPEDTGMKSHPYHLKIPNDGTDVWEIDPKHLKFGSKVAS 302
K+ + E Q + S +E + + Y LK WE ++L+FG + S
Sbjct: 4 KKQFRYESQLQMVQVTGSSDNEYFYVDFREYEYDLK--------WEFPRENLEFGKVLGS 55
Query: 303 GSYGDLYRGTY-------CSQDVAIKVLKPERINSDMQKEFAQEVFIMRKV-RHKNVVQF 354
G++G + T S VA+K+LK E+ +S ++ E+ +M ++ H+N+V
Sbjct: 56 GAFGKVMNATAYGISKTGVSIQVAVKMLK-EKADSSEREALMSELKMMTQLGSHENIVNL 114
Query: 355 IGACTKPPSLCIVTEFMSGGSVYDYLHKLK----------------------GVFKLPSL 392
+GACT + ++ E+ G + +YL + V L
Sbjct: 115 LGACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDL 174
Query: 393 LKVAIDVSKGMNYLHQNNIIHRDLKAANLLMDENEVVKVADFGVAR-VKAQSGVMTAETG 451
L A V+KGM +L + +HRDL A N+L+ +VVK+ DFG+AR + + S +
Sbjct: 175 LCFAYQVAKGMEFLEFKSCVHRDLAARNVLVTHGKVVKICDFGLARDIMSDSNYVVRGNA 234
Query: 452 TY--RWMAPEVIEHKPYDHKADVFSFGIVLWELLT-GKLPY 489
+WMAPE + Y K+DV+S+GI+LWE+ + G PY
Sbjct: 235 RLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNPY 275
>pdb|3KMW|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mgatp)
pdb|3REP|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mnatp)
Length = 271
Score = 112 bits (280), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 67/221 (30%), Positives = 121/221 (54%), Gaps = 12/221 (5%)
Query: 289 IDPKHLKFGSKVASGSYGDLYRGTYCSQDVAIKVLKPERINSDMQKEFAQEVFIMRKVRH 348
ID K L F +K+ G+L++G + D+ +KVLK ++ ++F +E +R H
Sbjct: 7 IDFKQLNFLTKLNENHSGELWKGRWQGNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSH 66
Query: 349 KNVVQFIGACTKPPS--LCIVTEFMSGGSVYDYLHK-LKGVFKLPSLLKVAIDVSKGMNY 405
NV+ +GAC PP+ ++T +M GS+Y+ LH+ V +K A+D+++GM +
Sbjct: 67 PNVLPVLGACQSPPAPHPTLITHWMPYGSLYNVLHEGTNFVVDQSQAVKFALDMARGMAF 126
Query: 406 LH--QNNIIHRDLKAANLLMDENEVVKVADFGVARVKAQSGVMTAETGTYRWMAPEVIEH 463
LH + I L + ++++DE+ +++ V G M A W+APE ++
Sbjct: 127 LHTLEPLIPRHALNSRSVMIDEDMTARISMADVKFSFQSPGRMYAPA----WVAPEALQK 182
Query: 464 KPYD---HKADVFSFGIVLWELLTGKLPYEYLTPLQAAVGV 501
KP D AD++SF ++LWEL+T ++P+ L+ ++ + V
Sbjct: 183 KPEDTNRRSADMWSFAVLLWELVTREVPFADLSNMEIGMKV 223
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 112 bits (279), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 72/214 (33%), Positives = 111/214 (51%), Gaps = 18/214 (8%)
Query: 288 EIDPKH-----LKFGSKVASGSYG--DLYR----GTYCSQDVAIKVLKPERINSDMQKEF 336
E+DP H LK + G +G +L R G + VA+K LKPE + + +
Sbjct: 12 EVDPTHFEKRFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIA-DL 70
Query: 337 AQEVFIMRKVRHKNVVQFIGACTKPPS--LCIVTEFMSGGSVYDYLHKLKGVFKLPSLLK 394
+E+ I+R + H+N+V++ G CT+ + ++ EF+ GS+ +YL K K L LK
Sbjct: 71 KKEIEILRNLYHENIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNKINLKQQLK 130
Query: 395 VAIDVSKGMNYLHQNNIIHRDLKAANLLMDENEVVKVADFGVARV----KAQSGVMTAET 450
A+ + KGM+YL +HRDL A N+L++ VK+ DFG+ + K V
Sbjct: 131 YAVQICKGMDYLGSRQYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVKDDRD 190
Query: 451 GTYRWMAPEVIEHKPYDHKADVFSFGIVLWELLT 484
W APE + + +DV+SFG+ L ELLT
Sbjct: 191 SPVFWYAPECLMQSKFYIASDVWSFGVTLHELLT 224
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 111 bits (278), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 62/194 (31%), Positives = 105/194 (54%), Gaps = 4/194 (2%)
Query: 300 VASGSYGD--LYRGTYCSQDVAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQFIGA 357
+ G++ L R ++VAIK++ ++N ++ +EV IM+ + H N+V+
Sbjct: 20 IGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEV 79
Query: 358 CTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDLK 417
+L ++ E+ SGG V+DYL G K + + Y HQ I+HRDLK
Sbjct: 80 IETEKTLYLIMEYASGGEVFDYLVA-HGRMKEKEARSKFRQIVSAVQYCHQKRIVHRDLK 138
Query: 418 AANLLMDENEVVKVADFGVARVKAQSGVMTAETGTYRWMAPEVIEHKPYDH-KADVFSFG 476
A NLL+D + +K+ADFG + G + G+ + APE+ + K YD + DV+S G
Sbjct: 139 AENLLLDADMNIKIADFGFSNEFTVGGKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLG 198
Query: 477 IVLWELLTGKLPYE 490
++L+ L++G LP++
Sbjct: 199 VILYTLVSGSLPFD 212
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 111 bits (277), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 68/231 (29%), Positives = 112/231 (48%), Gaps = 28/231 (12%)
Query: 287 WEIDPKHLKFGSKVASGSYGDLYRGTY-------CSQDVAIKVLKPERINSDMQKEFAQE 339
WE L FG + +G++G + T + VA+K+LKP ++ + ++
Sbjct: 18 WEFPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSEL 77
Query: 340 VFIMRKVRHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKL----PSLL-- 393
+ H N+V +GACT ++TE+ G + ++L + + F P+++
Sbjct: 78 KVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMED 137
Query: 394 -----------KVAIDVSKGMNYLHQNNIIHRDLKAANLLMDENEVVKVADFGVAR-VKA 441
+ V+KGM +L N IHRDL A N+L+ + K+ DFG+AR +K
Sbjct: 138 DELALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRITKICDFGLARDIKN 197
Query: 442 QSGVMTAETGTY--RWMAPEVIEHKPYDHKADVFSFGIVLWELLT-GKLPY 489
S + +WMAPE I + Y ++DV+S+GI LWEL + G PY
Sbjct: 198 DSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPY 248
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 111 bits (277), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 68/231 (29%), Positives = 112/231 (48%), Gaps = 28/231 (12%)
Query: 287 WEIDPKHLKFGSKVASGSYGDLYRGTY-------CSQDVAIKVLKPERINSDMQKEFAQE 339
WE L FG + +G++G + T + VA+K+LKP ++ + ++
Sbjct: 34 WEFPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSEL 93
Query: 340 VFIMRKVRHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKL----PSLL-- 393
+ H N+V +GACT ++TE+ G + ++L + + F P+++
Sbjct: 94 KVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMED 153
Query: 394 -----------KVAIDVSKGMNYLHQNNIIHRDLKAANLLMDENEVVKVADFGVAR-VKA 441
+ V+KGM +L N IHRDL A N+L+ + K+ DFG+AR +K
Sbjct: 154 DELALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRITKICDFGLARDIKN 213
Query: 442 QSGVMTAETGTY--RWMAPEVIEHKPYDHKADVFSFGIVLWELLT-GKLPY 489
S + +WMAPE I + Y ++DV+S+GI LWEL + G PY
Sbjct: 214 DSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPY 264
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 110 bits (276), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 63/194 (32%), Positives = 105/194 (54%), Gaps = 4/194 (2%)
Query: 300 VASGSYGD--LYRGTYCSQDVAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQFIGA 357
+ G++ L R ++VA+K++ ++NS ++ +EV IM+ + H N+V+
Sbjct: 22 IGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEV 81
Query: 358 CTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDLK 417
+L +V E+ SGG V+DYL G K + + Y HQ I+HRDLK
Sbjct: 82 IETEKTLYLVMEYASGGEVFDYLVA-HGRMKEKEARAKFRQIVSAVQYCHQKFIVHRDLK 140
Query: 418 AANLLMDENEVVKVADFGVARVKAQSGVMTAETGTYRWMAPEVIEHKPYDH-KADVFSFG 476
A NLL+D + +K+ADFG + + A G + APE+ + K YD + DV+S G
Sbjct: 141 AENLLLDADMNIKIADFGFSNEFTFGNKLDAFCGAPPYAAPELFQGKKYDGPEVDVWSLG 200
Query: 477 IVLWELLTGKLPYE 490
++L+ L++G LP++
Sbjct: 201 VILYTLVSGSLPFD 214
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 110 bits (276), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 68/231 (29%), Positives = 112/231 (48%), Gaps = 28/231 (12%)
Query: 287 WEIDPKHLKFGSKVASGSYGDLYRGTY-------CSQDVAIKVLKPERINSDMQKEFAQE 339
WE L FG + +G++G + T + VA+K+LKP ++ + ++
Sbjct: 36 WEFPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSEL 95
Query: 340 VFIMRKVRHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKL----PSLL-- 393
+ H N+V +GACT ++TE+ G + ++L + + F P+++
Sbjct: 96 KVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMED 155
Query: 394 -----------KVAIDVSKGMNYLHQNNIIHRDLKAANLLMDENEVVKVADFGVAR-VKA 441
+ V+KGM +L N IHRDL A N+L+ + K+ DFG+AR +K
Sbjct: 156 DELALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRITKICDFGLARDIKN 215
Query: 442 QSGVMTAETGTY--RWMAPEVIEHKPYDHKADVFSFGIVLWELLT-GKLPY 489
S + +WMAPE I + Y ++DV+S+GI LWEL + G PY
Sbjct: 216 DSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPY 266
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 110 bits (276), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 68/231 (29%), Positives = 112/231 (48%), Gaps = 28/231 (12%)
Query: 287 WEIDPKHLKFGSKVASGSYGDLYRGTY-------CSQDVAIKVLKPERINSDMQKEFAQE 339
WE L FG + +G++G + T + VA+K+LKP ++ + ++
Sbjct: 41 WEFPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSEL 100
Query: 340 VFIMRKVRHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKL----PSLL-- 393
+ H N+V +GACT ++TE+ G + ++L + + F P+++
Sbjct: 101 KVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMED 160
Query: 394 -----------KVAIDVSKGMNYLHQNNIIHRDLKAANLLMDENEVVKVADFGVAR-VKA 441
+ V+KGM +L N IHRDL A N+L+ + K+ DFG+AR +K
Sbjct: 161 DELALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRITKICDFGLARHIKN 220
Query: 442 QSGVMTAETGTY--RWMAPEVIEHKPYDHKADVFSFGIVLWELLT-GKLPY 489
S + +WMAPE I + Y ++DV+S+GI LWEL + G PY
Sbjct: 221 DSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPY 271
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 110 bits (276), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 68/231 (29%), Positives = 112/231 (48%), Gaps = 28/231 (12%)
Query: 287 WEIDPKHLKFGSKVASGSYGDLYRGTY-------CSQDVAIKVLKPERINSDMQKEFAQE 339
WE L FG + +G++G + T + VA+K+LKP ++ + ++
Sbjct: 41 WEFPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSEL 100
Query: 340 VFIMRKVRHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKL----PSLL-- 393
+ H N+V +GACT ++TE+ G + ++L + + F P+++
Sbjct: 101 KVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMED 160
Query: 394 -----------KVAIDVSKGMNYLHQNNIIHRDLKAANLLMDENEVVKVADFGVAR-VKA 441
+ V+KGM +L N IHRDL A N+L+ + K+ DFG+AR +K
Sbjct: 161 DELALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRITKICDFGLARDIKN 220
Query: 442 QSGVMTAETGTY--RWMAPEVIEHKPYDHKADVFSFGIVLWELLT-GKLPY 489
S + +WMAPE I + Y ++DV+S+GI LWEL + G PY
Sbjct: 221 DSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPY 271
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 110 bits (276), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 66/214 (30%), Positives = 110/214 (51%), Gaps = 14/214 (6%)
Query: 283 GTDVWEIDPKHLKFGSKVASGSYGDLYRGTY------CSQDVAIKVLKPERINSDMQKEF 336
G+D + + +HLKF ++ G++G + Y + VA+K L + + ++F
Sbjct: 1 GSDPTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKL--QHSTEEHLRDF 58
Query: 337 AQEVFIMRKVRHKNVVQFIGACTKPP--SLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLK 394
+E+ I++ ++H N+V++ G C +L ++ E++ GS+ DYL K K LL+
Sbjct: 59 EREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQ 118
Query: 395 VAIDVSKGMNYLHQNNIIHRDLKAANLLMDENEVVKVADFGVARV----KAQSGVMTAET 450
+ KGM YL IHRDL N+L++ VK+ DFG+ +V K V
Sbjct: 119 YTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGE 178
Query: 451 GTYRWMAPEVIEHKPYDHKADVFSFGIVLWELLT 484
W APE + + +DV+SFG+VL+EL T
Sbjct: 179 SPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 212
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 69/209 (33%), Positives = 107/209 (51%), Gaps = 15/209 (7%)
Query: 300 VASGSYGDLYRGTYCSQ-----DVAIKVLKPERINSDMQKE-FAQEVFIMRKVRHKNVVQ 353
+ G +G +Y G Y Q AIK L RI Q E F +E +MR + H NV+
Sbjct: 29 IGKGHFGVVYHGEYIDQAQNRIQCAIKSLS--RITEMQQVEAFLREGLLMRGLNHPNVLA 86
Query: 354 FIGACTKPPSLC-IVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNII 412
IG P L ++ +M G + ++ + + L+ + V++GM YL + +
Sbjct: 87 LIGIMLPPEGLPHVLLPYMCHGDLLQFIRSPQRNPTVKDLISFGLQVARGMEYLAEQKFV 146
Query: 413 HRDLKAANLLMDENEVVKVADFGVARVKAQSGVMTAETGTY-----RWMAPEVIEHKPYD 467
HRDL A N ++DE+ VKVADFG+AR + + + +W A E ++ +
Sbjct: 147 HRDLAARNCMLDESFTVKVADFGLARDILDREYYSVQQHRHARLPVKWTALESLQTYRFT 206
Query: 468 HKADVFSFGIVLWELLT-GKLPYEYLTPL 495
K+DV+SFG++LWELLT G PY ++ P
Sbjct: 207 TKSDVWSFGVLLWELLTRGAPPYRHIDPF 235
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 70/213 (32%), Positives = 118/213 (55%), Gaps = 20/213 (9%)
Query: 294 LKFGSKVASGSYGDLYRGTYCSQD--VAIK--VLKPERINSDMQ---KEFAQEVFIMRKV 346
+++ ++ G +G +++G VAIK +L ++M +EF +EVFIM +
Sbjct: 21 IEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNL 80
Query: 347 RHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYL 406
H N+V+ G PP + V EF+ G +Y L K L++ +D++ G+ Y+
Sbjct: 81 NHPNIVKLYGLMHNPPRM--VMEFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIALGIEYM 138
Query: 407 HQNN--IIHRDLKAANLLM---DENEVV--KVADFGVARVKAQSGVMTAETGTYRWMAPE 459
N I+HRDL++ N+ + DEN V KVADFG+++ S ++ G ++WMAPE
Sbjct: 139 QNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGLSQQSVHS--VSGLLGNFQWMAPE 196
Query: 460 VI--EHKPYDHKADVFSFGIVLWELLTGKLPYE 490
I E + Y KAD +SF ++L+ +LTG+ P++
Sbjct: 197 TIGAEEESYTEKADTYSFAMILYTILTGEGPFD 229
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 77/234 (32%), Positives = 131/234 (55%), Gaps = 12/234 (5%)
Query: 284 TDVWEIDPKHLKFGSKV--ASGSYGDLYRGTYCSQDVAIKVLK-PERINSDMQKEFAQEV 340
+D+ E D ++ + G +V G+YG +Y G S V I + + PER +S + +E+
Sbjct: 12 SDLLEYDYEYDENGDRVVLGKGTYGIVYAGRDLSNQVRIAIKEIPER-DSRYSQPLHEEI 70
Query: 341 FIMRKVRHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFK--LPSLLKVAID 398
+ + ++HKN+VQ++G+ ++ + I E + GGS+ L G K ++
Sbjct: 71 ALHKHLKHKNIVQYLGSFSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQ 130
Query: 399 VSKGMNYLHQNNIIHRDLKAANLLMDE-NEVVKVADFGVA-RVKAQSGVMTAETGTYRWM 456
+ +G+ YLH N I+HRD+K N+L++ + V+K++DFG + R+ + TGT ++M
Sbjct: 131 ILEGLKYLHDNQIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGINPCTETFTGTLQYM 190
Query: 457 APEVIEHKP--YDHKADVFSFGIVLWELLTGKLPYEYLTPLQAAVGVVQ--KVH 506
APE+I+ P Y AD++S G + E+ TGK P+ L QAA+ V KVH
Sbjct: 191 APEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFYELGEPQAAMFKVGMFKVH 244
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 70/213 (32%), Positives = 117/213 (54%), Gaps = 20/213 (9%)
Query: 294 LKFGSKVASGSYGDLYRGTYCSQD--VAIK--VLKPERINSDMQ---KEFAQEVFIMRKV 346
+++ ++ G +G +++G VAIK +L ++M +EF +EVFIM +
Sbjct: 21 IEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNL 80
Query: 347 RHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYL 406
H N+V+ G PP + V EF+ G +Y L K L++ +D++ G+ Y+
Sbjct: 81 NHPNIVKLYGLMHNPPRM--VMEFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIALGIEYM 138
Query: 407 HQNN--IIHRDLKAANLLM---DENEVV--KVADFGVARVKAQSGVMTAETGTYRWMAPE 459
N I+HRDL++ N+ + DEN V KVADFG ++ S ++ G ++WMAPE
Sbjct: 139 QNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGTSQQSVHS--VSGLLGNFQWMAPE 196
Query: 460 VI--EHKPYDHKADVFSFGIVLWELLTGKLPYE 490
I E + Y KAD +SF ++L+ +LTG+ P++
Sbjct: 197 TIGAEEESYTEKADTYSFAMILYTILTGEGPFD 229
>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 367
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 69/226 (30%), Positives = 112/226 (49%), Gaps = 21/226 (9%)
Query: 284 TDVWEIDPKHLKFGSKVASGSYGDLYRGTYCSQ-------DVAIKVLKPERINSDMQKEF 336
+D+ E+ K++ + G++G++Y G VA+K L PE + + +F
Sbjct: 63 SDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTL-PEVCSEQDELDF 121
Query: 337 AQEVFIMRKVRHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPS----- 391
E I+ K H+N+V+ IG + I+ E M+GG + +L + + PS
Sbjct: 122 LMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAML 181
Query: 392 -LLKVAIDVSKGMNYLHQNNIIHRDLKAANLLM---DENEVVKVADFGVARVKAQSGVMT 447
LL VA D++ G YL +N+ IHRD+ A N L+ V K+ DFG+AR ++G
Sbjct: 182 DLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAGYYR 241
Query: 448 AETGTY---RWMAPEVIEHKPYDHKADVFSFGIVLWELLT-GKLPY 489
+WM PE + K D +SFG++LWE+ + G +PY
Sbjct: 242 KGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPY 287
>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
pdb|3LCS|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 344
Score = 110 bits (274), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 69/226 (30%), Positives = 112/226 (49%), Gaps = 21/226 (9%)
Query: 284 TDVWEIDPKHLKFGSKVASGSYGDLYRGTYCSQ-------DVAIKVLKPERINSDMQKEF 336
+D+ E+ K++ + G++G++Y G VA+K L PE + + +F
Sbjct: 40 SDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTL-PEVCSEQDELDF 98
Query: 337 AQEVFIMRKVRHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPS----- 391
E I+ K H+N+V+ IG + I+ E M+GG + +L + + PS
Sbjct: 99 LMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAML 158
Query: 392 -LLKVAIDVSKGMNYLHQNNIIHRDLKAANLLM---DENEVVKVADFGVARVKAQSGVMT 447
LL VA D++ G YL +N+ IHRD+ A N L+ V K+ DFG+AR ++G
Sbjct: 159 DLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAGYYR 218
Query: 448 AETGTY---RWMAPEVIEHKPYDHKADVFSFGIVLWELLT-GKLPY 489
+WM PE + K D +SFG++LWE+ + G +PY
Sbjct: 219 KGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPY 264
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 110 bits (274), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 66/201 (32%), Positives = 110/201 (54%), Gaps = 12/201 (5%)
Query: 300 VASGSYGDLYRGTYCSQD------VAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQ 353
+ SG++G +Y+G + VAIKVL+ E + KE E ++M V V +
Sbjct: 25 LGSGAFGTVYKGIWIPDGENVKIPVAIKVLR-ENTSPKANKEILDEAYVMAGVGSPYVSR 83
Query: 354 FIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIH 413
+G C ++ +VT+ M G + D++ + +G LL + ++KGM+YL ++H
Sbjct: 84 LLGICLTS-TVQLVTQLMPYGCLLDHVRENRGRLGSQDLLNWCMQIAKGMSYLEDVRLVH 142
Query: 414 RDLKAANLLMDENEVVKVADFGVAR-VKAQSGVMTAETGT--YRWMAPEVIEHKPYDHKA 470
RDL A N+L+ VK+ DFG+AR + A+ G +WMA E I + + H++
Sbjct: 143 RDLAARNVLVKSPNHVKITDFGLARLLDIDETEYHADGGKVPIKWMALESILRRRFTHQS 202
Query: 471 DVFSFGIVLWELLT-GKLPYE 490
DV+S+G+ +WEL+T G PY+
Sbjct: 203 DVWSYGVTVWELMTFGAKPYD 223
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 110 bits (274), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 71/213 (33%), Positives = 110/213 (51%), Gaps = 18/213 (8%)
Query: 289 IDPKH-----LKFGSKVASGSYG--DLYR----GTYCSQDVAIKVLKPERINSDMQKEFA 337
+DP H LK + G +G +L R G + VA+K LKPE + + +
Sbjct: 1 VDPTHFEKRFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIA-DLK 59
Query: 338 QEVFIMRKVRHKNVVQFIGACTKPPS--LCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKV 395
+E+ I+R + H+N+V++ G CT+ + ++ EF+ GS+ +YL K K L LK
Sbjct: 60 KEIEILRNLYHENIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNKINLKQQLKY 119
Query: 396 AIDVSKGMNYLHQNNIIHRDLKAANLLMDENEVVKVADFGVARV----KAQSGVMTAETG 451
A+ + KGM+YL +HRDL A N+L++ VK+ DFG+ + K V
Sbjct: 120 AVQICKGMDYLGSRQYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVKDDRDS 179
Query: 452 TYRWMAPEVIEHKPYDHKADVFSFGIVLWELLT 484
W APE + + +DV+SFG+ L ELLT
Sbjct: 180 PVFWYAPECLMQSKFYIASDVWSFGVTLHELLT 212
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 110 bits (274), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 66/214 (30%), Positives = 110/214 (51%), Gaps = 14/214 (6%)
Query: 283 GTDVWEIDPKHLKFGSKVASGSYGDLYRGTY------CSQDVAIKVLKPERINSDMQKEF 336
G+D + + +HLKF ++ G++G + Y + VA+K L + + ++F
Sbjct: 1 GSDPTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKL--QHSTEEHLRDF 58
Query: 337 AQEVFIMRKVRHKNVVQFIGACTKPP--SLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLK 394
+E+ I++ ++H N+V++ G C +L ++ E++ GS+ DYL K K LL+
Sbjct: 59 EREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQ 118
Query: 395 VAIDVSKGMNYLHQNNIIHRDLKAANLLMDENEVVKVADFGVARVKAQS----GVMTAET 450
+ KGM YL IHRDL N+L++ VK+ DFG+ +V Q V
Sbjct: 119 YTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEFFKVKEPGE 178
Query: 451 GTYRWMAPEVIEHKPYDHKADVFSFGIVLWELLT 484
W APE + + +DV+SFG+VL+EL T
Sbjct: 179 SPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 212
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 110 bits (274), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 62/194 (31%), Positives = 105/194 (54%), Gaps = 4/194 (2%)
Query: 300 VASGSYGD--LYRGTYCSQDVAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQFIGA 357
+ G++ L R ++VA+K++ ++NS ++ +EV IM+ + H N+V+
Sbjct: 22 IGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEV 81
Query: 358 CTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDLK 417
+L +V E+ SGG V+DYL G K + + Y HQ I+HRDLK
Sbjct: 82 IETEKTLYLVMEYASGGEVFDYLVA-HGRMKEKEARAKFRQIVSAVQYCHQKFIVHRDLK 140
Query: 418 AANLLMDENEVVKVADFGVARVKAQSGVMTAETGTYRWMAPEVIEHKPYDH-KADVFSFG 476
A NLL+D + +K+ADFG + + G+ + APE+ + K YD + DV+S G
Sbjct: 141 AENLLLDADMNIKIADFGFSNEFTFGNKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLG 200
Query: 477 IVLWELLTGKLPYE 490
++L+ L++G LP++
Sbjct: 201 VILYTLVSGSLPFD 214
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 109 bits (273), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 62/194 (31%), Positives = 105/194 (54%), Gaps = 4/194 (2%)
Query: 300 VASGSYGD--LYRGTYCSQDVAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQFIGA 357
+ G++ L R ++VA+K++ ++NS ++ +EV IM+ + H N+V+
Sbjct: 22 IGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEV 81
Query: 358 CTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDLK 417
+L +V E+ SGG V+DYL G K + + Y HQ I+HRDLK
Sbjct: 82 IETEKTLYLVMEYASGGEVFDYLVA-HGRMKEKEARAKFRQIVSAVQYCHQKFIVHRDLK 140
Query: 418 AANLLMDENEVVKVADFGVARVKAQSGVMTAETGTYRWMAPEVIEHKPYDH-KADVFSFG 476
A NLL+D + +K+ADFG + + G+ + APE+ + K YD + DV+S G
Sbjct: 141 AENLLLDADMNIKIADFGFSNEFTFGNKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLG 200
Query: 477 IVLWELLTGKLPYE 490
++L+ L++G LP++
Sbjct: 201 VILYTLVSGSLPFD 214
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 109 bits (273), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 65/218 (29%), Positives = 111/218 (50%), Gaps = 14/218 (6%)
Query: 279 IPNDGTDVWEIDPKHLKFGSKVASGSYGDLYRGTY------CSQDVAIKVLKPERINSDM 332
+P ++ + + +HLKF ++ G++G + Y + VA+K L + +
Sbjct: 15 VPRGSHNMTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKL--QHSTEEH 72
Query: 333 QKEFAQEVFIMRKVRHKNVVQFIGACTKPP--SLCIVTEFMSGGSVYDYLHKLKGVFKLP 390
++F +E+ I++ ++H N+V++ G C +L ++ E++ GS+ DYL K K
Sbjct: 73 LRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHI 132
Query: 391 SLLKVAIDVSKGMNYLHQNNIIHRDLKAANLLMDENEVVKVADFGVARV----KAQSGVM 446
LL+ + KGM YL IHRDL N+L++ VK+ DFG+ +V K V
Sbjct: 133 KLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVK 192
Query: 447 TAETGTYRWMAPEVIEHKPYDHKADVFSFGIVLWELLT 484
W APE + + +DV+SFG+VL+EL T
Sbjct: 193 EPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 230
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 109 bits (273), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 66/199 (33%), Positives = 106/199 (53%), Gaps = 28/199 (14%)
Query: 318 VAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQFIGACTKPPSLCIVTEFMSGGSVY 377
VA+K+LK E ++DMQ +F +E +M + + N+V+ +G C +C++ E+M+ G +
Sbjct: 80 VAVKMLK-EEASADMQADFQREAALMAEFDNPNIVKLLGVCAVGKPMCLLFEYMAYGDLN 138
Query: 378 DYLHKLK--GVFKL----------------PSL-----LKVAIDVSKGMNYLHQNNIIHR 414
++L + V L P L L +A V+ GM YL + +HR
Sbjct: 139 EFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSERKFVHR 198
Query: 415 DLKAANLLMDENEVVKVADFGVARVKAQSGVMTAETG---TYRWMAPEVIEHKPYDHKAD 471
DL N L+ EN VVK+ADFG++R + A+ RWM PE I + Y ++D
Sbjct: 199 DLATRNCLVGENMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESD 258
Query: 472 VFSFGIVLWELLT-GKLPY 489
V+++G+VLWE+ + G PY
Sbjct: 259 VWAYGVVLWEIFSYGLQPY 277
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 109 bits (273), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 65/218 (29%), Positives = 111/218 (50%), Gaps = 14/218 (6%)
Query: 279 IPNDGTDVWEIDPKHLKFGSKVASGSYGDLYRGTY------CSQDVAIKVLKPERINSDM 332
+P ++ + + +HLKF ++ G++G + Y + VA+K L + +
Sbjct: 15 VPRGSHNMTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKL--QHSTEEH 72
Query: 333 QKEFAQEVFIMRKVRHKNVVQFIGACTKPP--SLCIVTEFMSGGSVYDYLHKLKGVFKLP 390
++F +E+ I++ ++H N+V++ G C +L ++ E++ GS+ DYL K K
Sbjct: 73 LRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHI 132
Query: 391 SLLKVAIDVSKGMNYLHQNNIIHRDLKAANLLMDENEVVKVADFGVARV----KAQSGVM 446
LL+ + KGM YL IHRDL N+L++ VK+ DFG+ +V K V
Sbjct: 133 KLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVK 192
Query: 447 TAETGTYRWMAPEVIEHKPYDHKADVFSFGIVLWELLT 484
W APE + + +DV+SFG+VL+EL T
Sbjct: 193 EPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 230
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 109 bits (273), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 69/224 (30%), Positives = 116/224 (51%), Gaps = 22/224 (9%)
Query: 287 WEIDPKHLKFGSKVASGSYGDLYRGTYCSQ-------DVAIKVLKPERINSDMQKEFAQE 339
WE +L+FG + +G++G + T VA+K+LK ++D ++ E
Sbjct: 33 WEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLK-STAHADEKEALMSE 91
Query: 340 VFIMRKV-RHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGV---------FKL 389
+ IM + +H+N+V +GACT + ++TE+ G + ++L + +L
Sbjct: 92 LKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLEL 151
Query: 390 PSLLKVAIDVSKGMNYLHQNNIIHRDLKAANLLMDENEVVKVADFGVAR-VKAQSGVMTA 448
LL + V++GM +L N IHRD+ A N+L+ V K+ DFG+AR + S +
Sbjct: 152 RDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVK 211
Query: 449 ETGTY--RWMAPEVIEHKPYDHKADVFSFGIVLWELLT-GKLPY 489
+WMAPE I Y ++DV+S+GI+LWE+ + G PY
Sbjct: 212 GNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPY 255
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 109 bits (272), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 75/232 (32%), Positives = 118/232 (50%), Gaps = 15/232 (6%)
Query: 276 HLKIPNDGTDVWEIDPKHLKFGSKVASGSYGDLYRGTYCSQDVAIKVLKPERI-NSDMQK 334
H+ P+ +D +E+ + L FG S L R +DVA+KVL+ + +
Sbjct: 3 HMTTPSHLSDRYELG-EILGFGGM----SEVHLARDLRDHRDVAVKVLRADLARDPSFYL 57
Query: 335 EFAQEVFIMRKVRHKNVVQF--IGACTKP--PSLCIVTEFMSGGSVYDYLHKLKGVFKLP 390
F +E + H +V G P P IV E++ G ++ D +H +G
Sbjct: 58 RFRREAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHT-EGPMTPK 116
Query: 391 SLLKVAIDVSKGMNYLHQNNIIHRDLKAANLLMDENEVVKVADFGVARVKAQSGVMTAET 450
++V D + +N+ HQN IIHRD+K AN+L+ VKV DFG+AR A SG +T
Sbjct: 117 RAIEVIADACQALNFSHQNGIIHRDVKPANILISATNAVKVVDFGIARAIADSGNSVXQT 176
Query: 451 ----GTYRWMAPEVIEHKPYDHKADVFSFGIVLWELLTGKLPYEYLTPLQAA 498
GT ++++PE D ++DV+S G VL+E+LTG+ P+ +P+ A
Sbjct: 177 AAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVA 228
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 109 bits (272), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 69/224 (30%), Positives = 116/224 (51%), Gaps = 22/224 (9%)
Query: 287 WEIDPKHLKFGSKVASGSYGDLYRGTYCSQ-------DVAIKVLKPERINSDMQKEFAQE 339
WE +L+FG + +G++G + T VA+K+LK ++D ++ E
Sbjct: 41 WEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLK-STAHADEKEALMSE 99
Query: 340 VFIMRKV-RHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGV---------FKL 389
+ IM + +H+N+V +GACT + ++TE+ G + ++L + +L
Sbjct: 100 LKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLEL 159
Query: 390 PSLLKVAIDVSKGMNYLHQNNIIHRDLKAANLLMDENEVVKVADFGVAR-VKAQSGVMTA 448
LL + V++GM +L N IHRD+ A N+L+ V K+ DFG+AR + S +
Sbjct: 160 RDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVK 219
Query: 449 ETGTY--RWMAPEVIEHKPYDHKADVFSFGIVLWELLT-GKLPY 489
+WMAPE I Y ++DV+S+GI+LWE+ + G PY
Sbjct: 220 GNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPY 263
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 109 bits (272), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 63/213 (29%), Positives = 113/213 (53%), Gaps = 11/213 (5%)
Query: 300 VASGSYGDLYRGTYCSQ-----DVAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQF 354
+ G +G++Y G Y + +VA+K K + D +++F E IM+ + H ++V+
Sbjct: 16 LGEGFFGEVYEGVYTNHKGEKINVAVKTCKKD-CTLDNKEKFMSEAVIMKNLDHPHIVKL 74
Query: 355 IGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHR 414
IG + P+ I+ E G + YL + K K+ +L+ ++ + K M YL N +HR
Sbjct: 75 IGIIEEEPTW-IIMELYPYGELGHYLERNKNSLKVLTLVLYSLQICKAMAYLESINCVHR 133
Query: 415 DLKAANLLMDENEVVKVADFGVARVKAQSGVMTAETGTY--RWMAPEVIEHKPYDHKADV 472
D+ N+L+ E VK+ DFG++R A +WM+PE I + + +DV
Sbjct: 134 DIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPIKWMSPESINFRRFTTASDV 193
Query: 473 FSFGIVLWELLT-GKLPYEYLTPLQAAVGVVQK 504
+ F + +WE+L+ GK P+ +L + +GV++K
Sbjct: 194 WMFAVCMWEILSFGKQPFFWLEN-KDVIGVLEK 225
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 109 bits (272), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 62/194 (31%), Positives = 105/194 (54%), Gaps = 4/194 (2%)
Query: 300 VASGSYGD--LYRGTYCSQDVAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQFIGA 357
+ G++ L R ++VA+K++ ++NS ++ +EV IM+ + H N+V+
Sbjct: 15 IGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEV 74
Query: 358 CTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDLK 417
+L +V E+ SGG V+DYL G K + + Y HQ I+HRDLK
Sbjct: 75 IETEKTLYLVMEYASGGEVFDYLVA-HGWMKEKEARAKFRQIVSAVQYCHQKFIVHRDLK 133
Query: 418 AANLLMDENEVVKVADFGVARVKAQSGVMTAETGTYRWMAPEVIEHKPYDH-KADVFSFG 476
A NLL+D + +K+ADFG + + G+ + APE+ + K YD + DV+S G
Sbjct: 134 AENLLLDADMNIKIADFGFSNEFTFGNKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLG 193
Query: 477 IVLWELLTGKLPYE 490
++L+ L++G LP++
Sbjct: 194 VILYTLVSGSLPFD 207
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 109 bits (272), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 63/213 (29%), Positives = 113/213 (53%), Gaps = 11/213 (5%)
Query: 300 VASGSYGDLYRGTYCSQ-----DVAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQF 354
+ G +G++Y G Y + +VA+K K + D +++F E IM+ + H ++V+
Sbjct: 32 LGEGFFGEVYEGVYTNHKGEKINVAVKTCKKD-CTLDNKEKFMSEAVIMKNLDHPHIVKL 90
Query: 355 IGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHR 414
IG + P+ I+ E G + YL + K K+ +L+ ++ + K M YL N +HR
Sbjct: 91 IGIIEEEPTW-IIMELYPYGELGHYLERNKNSLKVLTLVLYSLQICKAMAYLESINCVHR 149
Query: 415 DLKAANLLMDENEVVKVADFGVARVKAQSGVMTAETGTY--RWMAPEVIEHKPYDHKADV 472
D+ N+L+ E VK+ DFG++R A +WM+PE I + + +DV
Sbjct: 150 DIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPIKWMSPESINFRRFTTASDV 209
Query: 473 FSFGIVLWELLT-GKLPYEYLTPLQAAVGVVQK 504
+ F + +WE+L+ GK P+ +L + +GV++K
Sbjct: 210 WMFAVCMWEILSFGKQPFFWLEN-KDVIGVLEK 241
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 109 bits (272), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 74/232 (31%), Positives = 118/232 (50%), Gaps = 15/232 (6%)
Query: 276 HLKIPNDGTDVWEIDPKHLKFGSKVASGSYGDLYRGTYCSQDVAIKVLKPERI-NSDMQK 334
H+ P+ +D +E+ + L FG S L R +DVA+KVL+ + +
Sbjct: 3 HMTTPSHLSDRYELG-EILGFGGM----SEVHLARDLRLHRDVAVKVLRADLARDPSFYL 57
Query: 335 EFAQEVFIMRKVRHKNVVQF--IGACTKP--PSLCIVTEFMSGGSVYDYLHKLKGVFKLP 390
F +E + H +V G P P IV E++ G ++ D +H +G
Sbjct: 58 RFRREAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHT-EGPMTPK 116
Query: 391 SLLKVAIDVSKGMNYLHQNNIIHRDLKAANLLMDENEVVKVADFGVARVKAQSGVMTAET 450
++V D + +N+ HQN IIHRD+K AN+++ VKV DFG+AR A SG +T
Sbjct: 117 RAIEVIADACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQT 176
Query: 451 ----GTYRWMAPEVIEHKPYDHKADVFSFGIVLWELLTGKLPYEYLTPLQAA 498
GT ++++PE D ++DV+S G VL+E+LTG+ P+ +P+ A
Sbjct: 177 AAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVA 228
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 108 bits (271), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 74/232 (31%), Positives = 118/232 (50%), Gaps = 15/232 (6%)
Query: 276 HLKIPNDGTDVWEIDPKHLKFGSKVASGSYGDLYRGTYCSQDVAIKVLKPERI-NSDMQK 334
H+ P+ +D +E+ + L FG S L R +DVA+KVL+ + +
Sbjct: 3 HMTTPSHLSDRYELG-EILGFGGM----SEVHLARDLRLHRDVAVKVLRADLARDPSFYL 57
Query: 335 EFAQEVFIMRKVRHKNVVQF--IGACTKP--PSLCIVTEFMSGGSVYDYLHKLKGVFKLP 390
F +E + H +V G P P IV E++ G ++ D +H +G
Sbjct: 58 RFRREAQNAAALNHPAIVAVYATGEAETPAGPLPYIVMEYVDGVTLRDIVHT-EGPMTPK 116
Query: 391 SLLKVAIDVSKGMNYLHQNNIIHRDLKAANLLMDENEVVKVADFGVARVKAQSGVMTAET 450
++V D + +N+ HQN IIHRD+K AN+++ VKV DFG+AR A SG +T
Sbjct: 117 RAIEVIADACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQT 176
Query: 451 ----GTYRWMAPEVIEHKPYDHKADVFSFGIVLWELLTGKLPYEYLTPLQAA 498
GT ++++PE D ++DV+S G VL+E+LTG+ P+ +P+ A
Sbjct: 177 AAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVA 228
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 108 bits (271), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 63/213 (29%), Positives = 113/213 (53%), Gaps = 11/213 (5%)
Query: 300 VASGSYGDLYRGTYCSQ-----DVAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQF 354
+ G +G++Y G Y + +VA+K K + D +++F E IM+ + H ++V+
Sbjct: 20 LGEGFFGEVYEGVYTNHKGEKINVAVKTCKKD-CTLDNKEKFMSEAVIMKNLDHPHIVKL 78
Query: 355 IGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHR 414
IG + P+ I+ E G + YL + K K+ +L+ ++ + K M YL N +HR
Sbjct: 79 IGIIEEEPTW-IIMELYPYGELGHYLERNKNSLKVLTLVLYSLQICKAMAYLESINCVHR 137
Query: 415 DLKAANLLMDENEVVKVADFGVARVKAQSGVMTAETGTY--RWMAPEVIEHKPYDHKADV 472
D+ N+L+ E VK+ DFG++R A +WM+PE I + + +DV
Sbjct: 138 DIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPIKWMSPESINFRRFTTASDV 197
Query: 473 FSFGIVLWELLT-GKLPYEYLTPLQAAVGVVQK 504
+ F + +WE+L+ GK P+ +L + +GV++K
Sbjct: 198 WMFAVCMWEILSFGKQPFFWLEN-KDVIGVLEK 229
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 108 bits (271), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 61/194 (31%), Positives = 105/194 (54%), Gaps = 4/194 (2%)
Query: 300 VASGSYGD--LYRGTYCSQDVAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQFIGA 357
+ G++ L R ++VA++++ ++NS ++ +EV IM+ + H N+V+
Sbjct: 22 IGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEV 81
Query: 358 CTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDLK 417
+L +V E+ SGG V+DYL G K + + Y HQ I+HRDLK
Sbjct: 82 IETEKTLYLVMEYASGGEVFDYLVA-HGRMKEKEARAKFRQIVSAVQYCHQKFIVHRDLK 140
Query: 418 AANLLMDENEVVKVADFGVARVKAQSGVMTAETGTYRWMAPEVIEHKPYDH-KADVFSFG 476
A NLL+D + +K+ADFG + + G+ + APE+ + K YD + DV+S G
Sbjct: 141 AENLLLDADMNIKIADFGFSNEFTFGNKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLG 200
Query: 477 IVLWELLTGKLPYE 490
++L+ L++G LP++
Sbjct: 201 VILYTLVSGSLPFD 214
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 108 bits (270), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 62/194 (31%), Positives = 104/194 (53%), Gaps = 4/194 (2%)
Query: 300 VASGSYGD--LYRGTYCSQDVAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQFIGA 357
+ G++ L R ++VA+K++ ++NS ++ +EV I + + H N+V+
Sbjct: 22 IGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIXKVLNHPNIVKLFEV 81
Query: 358 CTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDLK 417
+L +V E+ SGG V+DYL G K + + Y HQ I+HRDLK
Sbjct: 82 IETEKTLYLVXEYASGGEVFDYLVA-HGRXKEKEARAKFRQIVSAVQYCHQKFIVHRDLK 140
Query: 418 AANLLMDENEVVKVADFGVARVKAQSGVMTAETGTYRWMAPEVIEHKPYDH-KADVFSFG 476
A NLL+D + +K+ADFG + + A G + APE+ + K YD + DV+S G
Sbjct: 141 AENLLLDADXNIKIADFGFSNEFTFGNKLDAFCGAPPYAAPELFQGKKYDGPEVDVWSLG 200
Query: 477 IVLWELLTGKLPYE 490
++L+ L++G LP++
Sbjct: 201 VILYTLVSGSLPFD 214
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 108 bits (270), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 61/194 (31%), Positives = 105/194 (54%), Gaps = 4/194 (2%)
Query: 300 VASGSYGD--LYRGTYCSQDVAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQFIGA 357
+ G++ L R ++VA++++ ++NS ++ +EV IM+ + H N+V+
Sbjct: 22 IGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEV 81
Query: 358 CTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDLK 417
+L +V E+ SGG V+DYL G K + + Y HQ I+HRDLK
Sbjct: 82 IETEKTLYLVMEYASGGEVFDYLVA-HGRMKEKEARAKFRQIVSAVQYCHQKFIVHRDLK 140
Query: 418 AANLLMDENEVVKVADFGVARVKAQSGVMTAETGTYRWMAPEVIEHKPYDH-KADVFSFG 476
A NLL+D + +K+ADFG + + G+ + APE+ + K YD + DV+S G
Sbjct: 141 AENLLLDADMNIKIADFGFSNEFTFGNKLDEFCGSPPYAAPELFQGKKYDGPEVDVWSLG 200
Query: 477 IVLWELLTGKLPYE 490
++L+ L++G LP++
Sbjct: 201 VILYTLVSGSLPFD 214
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 108 bits (270), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 75/239 (31%), Positives = 120/239 (50%), Gaps = 15/239 (6%)
Query: 269 GMKSHPYHLKIPNDGTDVWEIDPKHLKFGSKVASGSYGDLYRGTYCSQDVAIKVLKPERI 328
G+ H+ P+ +D +E+ + L FG S L R +DVA+KVL+ +
Sbjct: 13 GLVPRGSHMTTPSHLSDRYELG-EILGFGGM----SEVHLARDLRLHRDVAVKVLRADLA 67
Query: 329 -NSDMQKEFAQEVFIMRKVRHKNVVQF--IGACTKP--PSLCIVTEFMSGGSVYDYLHKL 383
+ F +E + H +V G P P IV E++ G ++ D +H
Sbjct: 68 RDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHT- 126
Query: 384 KGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDLKAANLLMDENEVVKVADFGVARVKAQS 443
+G ++V D + +N+ HQN IIHRD+K AN+++ VKV DFG+AR A S
Sbjct: 127 EGPMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADS 186
Query: 444 GVMTAET----GTYRWMAPEVIEHKPYDHKADVFSFGIVLWELLTGKLPYEYLTPLQAA 498
G +T GT ++++PE D ++DV+S G VL+E+LTG+ P+ +P+ A
Sbjct: 187 GNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVA 245
>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma
Kinase Catalytic Domain
Length = 327
Score = 108 bits (270), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 68/226 (30%), Positives = 112/226 (49%), Gaps = 21/226 (9%)
Query: 284 TDVWEIDPKHLKFGSKVASGSYGDLYRGTYCSQ-------DVAIKVLKPERINSDMQKEF 336
+D+ E+ K++ + G++G++Y G VA+K L PE + + +F
Sbjct: 23 SDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTL-PEVCSEQDELDF 81
Query: 337 AQEVFIMRKVRHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPS----- 391
E I+ K+ H+N+V+ IG + I+ E M+GG + +L + + PS
Sbjct: 82 LMEALIISKLNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAML 141
Query: 392 -LLKVAIDVSKGMNYLHQNNIIHRDLKAANLLM---DENEVVKVADFGVARVKAQSGVMT 447
LL VA D++ G YL +N+ IHRD+ A N L+ V K+ DFG+AR ++
Sbjct: 142 DLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYR 201
Query: 448 AETGTY---RWMAPEVIEHKPYDHKADVFSFGIVLWELLT-GKLPY 489
+WM PE + K D +SFG++LWE+ + G +PY
Sbjct: 202 KGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPY 247
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 108 bits (270), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 66/212 (31%), Positives = 112/212 (52%), Gaps = 15/212 (7%)
Query: 303 GSYGDLYRGTYCSQDVAIKVLKPERINSDMQKE----FAQEVFIMRKVRHKNVVQFIGAC 358
G +G +Y+ +Q+ VL ++ +E + E+ I+ H N+V+ + A
Sbjct: 21 GDFGKVYK----AQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAF 76
Query: 359 TKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDLKA 418
+L I+ EF +GG+V + +L+ + V +NYLH N IIHRDLKA
Sbjct: 77 YYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLHDNKIIHRDLKA 136
Query: 419 ANLLMDENEVVKVADFGVARVKAQSGVMTAET--GTYRWMAPEVI-----EHKPYDHKAD 471
N+L + +K+ADFGV+ ++ + ++ GT WMAPEV+ + +PYD+KAD
Sbjct: 137 GNILFTLDGDIKLADFGVSAKNTRTXIQRRDSFIGTPYWMAPEVVMCETSKDRPYDYKAD 196
Query: 472 VFSFGIVLWELLTGKLPYEYLTPLQAAVGVVQ 503
V+S GI L E+ + P+ L P++ + + +
Sbjct: 197 VWSLGITLIEMAEIEPPHHELNPMRVLLKIAK 228
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 108 bits (269), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 113/202 (55%), Gaps = 5/202 (2%)
Query: 293 HLKFGSKVASGSYGDLYRGTY--CSQDVAIKVLKPERINS-DMQKEFAQEVFIMRKVRHK 349
H G + G++G + G + VA+K+L ++I S D+ + +E+ ++ RH
Sbjct: 17 HYILGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHP 76
Query: 350 NVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQN 409
++++ + P + +V E++SGG ++DY+ K G ++ + G++Y H++
Sbjct: 77 HIIKLYQVISTPSDIFMVMEYVSGGELFDYICK-NGRLDEKESRRLFQQILSGVDYCHRH 135
Query: 410 NIIHRDLKAANLLMDENEVVKVADFGVARVKAQSGVMTAETGTYRWMAPEVIEHKPY-DH 468
++HRDLK N+L+D + K+ADFG++ + + + G+ + APEVI + Y
Sbjct: 136 MVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRXSCGSPNYAAPEVISGRLYAGP 195
Query: 469 KADVFSFGIVLWELLTGKLPYE 490
+ D++S G++L+ LL G LP++
Sbjct: 196 EVDIWSSGVILYALLCGTLPFD 217
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 108 bits (269), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 74/232 (31%), Positives = 118/232 (50%), Gaps = 15/232 (6%)
Query: 276 HLKIPNDGTDVWEIDPKHLKFGSKVASGSYGDLYRGTYCSQDVAIKVLKPERI-NSDMQK 334
H+ P+ +D +E+ + L FG S L R +DVA+KVL+ + +
Sbjct: 3 HMTTPSHLSDRYELG-EILGFGGM----SEVHLARDLRDHRDVAVKVLRADLARDPSFYL 57
Query: 335 EFAQEVFIMRKVRHKNVVQF--IGACTKP--PSLCIVTEFMSGGSVYDYLHKLKGVFKLP 390
F +E + H +V G P P IV E++ G ++ D +H +G
Sbjct: 58 RFRREAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHT-EGPMTPK 116
Query: 391 SLLKVAIDVSKGMNYLHQNNIIHRDLKAANLLMDENEVVKVADFGVARVKAQSGVMTAET 450
++V D + +N+ HQN IIHRD+K AN+++ VKV DFG+AR A SG +T
Sbjct: 117 RAIEVIADACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQT 176
Query: 451 ----GTYRWMAPEVIEHKPYDHKADVFSFGIVLWELLTGKLPYEYLTPLQAA 498
GT ++++PE D ++DV+S G VL+E+LTG+ P+ +P+ A
Sbjct: 177 AAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVA 228
>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 68/226 (30%), Positives = 112/226 (49%), Gaps = 21/226 (9%)
Query: 284 TDVWEIDPKHLKFGSKVASGSYGDLYRGTYCSQ-------DVAIKVLKPERINSDMQKEF 336
+D+ E+ K++ + G++G++Y G VA+K L PE + + +F
Sbjct: 37 SDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTL-PEVCSEQDELDF 95
Query: 337 AQEVFIMRKVRHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPS----- 391
E I+ K+ H+N+V+ IG + I+ E M+GG + +L + + PS
Sbjct: 96 LMEALIISKLNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAML 155
Query: 392 -LLKVAIDVSKGMNYLHQNNIIHRDLKAANLLM---DENEVVKVADFGVARVKAQSGVMT 447
LL VA D++ G YL +N+ IHRD+ A N L+ V K+ DFG+AR ++
Sbjct: 156 DLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYR 215
Query: 448 AETGTY---RWMAPEVIEHKPYDHKADVFSFGIVLWELLT-GKLPY 489
+WM PE + K D +SFG++LWE+ + G +PY
Sbjct: 216 KGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPY 261
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 69/213 (32%), Positives = 117/213 (54%), Gaps = 20/213 (9%)
Query: 294 LKFGSKVASGSYGDLYRGTYCSQD--VAIK--VLKPERINSDMQ---KEFAQEVFIMRKV 346
+++ ++ G +G +++G VAIK +L ++M +EF +EVFIM +
Sbjct: 21 IEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNL 80
Query: 347 RHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYL 406
H N+V+ G PP + V EF+ G +Y L K L++ +D++ G+ Y+
Sbjct: 81 NHPNIVKLYGLMHNPPRM--VMEFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIALGIEYM 138
Query: 407 HQNN--IIHRDLKAANLLM---DENEVV--KVADFGVARVKAQSGVMTAETGTYRWMAPE 459
N I+HRDL++ N+ + DEN V KVADF +++ S ++ G ++WMAPE
Sbjct: 139 QNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFSLSQQSVHS--VSGLLGNFQWMAPE 196
Query: 460 VI--EHKPYDHKADVFSFGIVLWELLTGKLPYE 490
I E + Y KAD +SF ++L+ +LTG+ P++
Sbjct: 197 TIGAEEESYTEKADTYSFAMILYTILTGEGPFD 229
>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 1
pdb|4FOC|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 2
Length = 353
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 68/226 (30%), Positives = 111/226 (49%), Gaps = 21/226 (9%)
Query: 284 TDVWEIDPKHLKFGSKVASGSYGDLYRGTYCSQ-------DVAIKVLKPERINSDMQKEF 336
+D+ E+ K++ + G++G++Y G VA+K L PE + + +F
Sbjct: 49 SDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTL-PEVCSEQDELDF 107
Query: 337 AQEVFIMRKVRHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPS----- 391
E I+ K H+N+V+ IG + I+ E M+GG + +L + + PS
Sbjct: 108 LMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAML 167
Query: 392 -LLKVAIDVSKGMNYLHQNNIIHRDLKAANLLM---DENEVVKVADFGVARVKAQSGVMT 447
LL VA D++ G YL +N+ IHRD+ A N L+ V K+ DFG+AR ++
Sbjct: 168 DLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYR 227
Query: 448 AETGTY---RWMAPEVIEHKPYDHKADVFSFGIVLWELLT-GKLPY 489
+WM PE + K D +SFG++LWE+ + G +PY
Sbjct: 228 KGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPY 273
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 65/212 (30%), Positives = 108/212 (50%), Gaps = 14/212 (6%)
Query: 285 DVWEIDPKHLKFGSKVASGSYGDLYRGTY------CSQDVAIKVLKPERINSDMQKEFAQ 338
D + + +HLKF ++ G++G + Y + VA+K L + + ++F +
Sbjct: 6 DPTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKL--QHSTEEHLRDFER 63
Query: 339 EVFIMRKVRHKNVVQFIGACTKPP--SLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVA 396
E+ I++ ++H N+V++ G C +L ++ E++ GS+ DYL K K LL+
Sbjct: 64 EIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYT 123
Query: 397 IDVSKGMNYLHQNNIIHRDLKAANLLMDENEVVKVADFGVARV----KAQSGVMTAETGT 452
+ KGM YL IHRDL N+L++ VK+ DFG+ +V K V
Sbjct: 124 SQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESP 183
Query: 453 YRWMAPEVIEHKPYDHKADVFSFGIVLWELLT 484
W APE + + +DV+SFG+VL+EL T
Sbjct: 184 IFWYAPESLTESKFSVASDVWSFGVVLYELFT 215
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 71/221 (32%), Positives = 111/221 (50%), Gaps = 15/221 (6%)
Query: 296 FGSKVASGSYGDLYRGTYCSQD-----VAIKVLKPERINSDMQ-KEFAQEVFIMRKVRHK 349
F + G +G +Y GT D A+K L RI + +F E IM+ H
Sbjct: 33 FNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSL--NRITDIGEVSQFLTEGIIMKDFSHP 90
Query: 350 NVVQFIGACTKPP-SLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQ 408
NV+ +G C + S +V +M G + +++ + L+ + V+KGM YL
Sbjct: 91 NVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLAS 150
Query: 409 NNIIHRDLKAANLLMDENEVVKVADFGVAR--VKAQSGVMTAETGT---YRWMAPEVIEH 463
+HRDL A N ++DE VKVADFG+AR + + +TG +WMA E ++
Sbjct: 151 KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEXXSVHNKTGAKLPVKWMALESLQT 210
Query: 464 KPYDHKADVFSFGIVLWELLT-GKLPYEYLTPLQAAVGVVQ 503
+ + K+DV+SFG++LWEL+T G PY + V ++Q
Sbjct: 211 QKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQ 251
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 107 bits (268), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 65/212 (30%), Positives = 108/212 (50%), Gaps = 14/212 (6%)
Query: 285 DVWEIDPKHLKFGSKVASGSYGDLYRGTY------CSQDVAIKVLKPERINSDMQKEFAQ 338
D + + +HLKF ++ G++G + Y + VA+K L + + ++F +
Sbjct: 8 DPTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKL--QHSTEEHLRDFER 65
Query: 339 EVFIMRKVRHKNVVQFIGACTKPP--SLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVA 396
E+ I++ ++H N+V++ G C +L ++ E++ GS+ DYL K K LL+
Sbjct: 66 EIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYT 125
Query: 397 IDVSKGMNYLHQNNIIHRDLKAANLLMDENEVVKVADFGVARV----KAQSGVMTAETGT 452
+ KGM YL IHRDL N+L++ VK+ DFG+ +V K V
Sbjct: 126 SQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESP 185
Query: 453 YRWMAPEVIEHKPYDHKADVFSFGIVLWELLT 484
W APE + + +DV+SFG+VL+EL T
Sbjct: 186 IFWYAPESLTESKFSVASDVWSFGVVLYELFT 217
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 107 bits (268), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 68/217 (31%), Positives = 118/217 (54%), Gaps = 10/217 (4%)
Query: 299 KVASGSYGD--LYRGTYCSQDVAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQFIG 356
K+ SG+YG+ L R + AIK+++ +++ + +EV +++ + H N+++
Sbjct: 44 KLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNIMKLYD 103
Query: 357 ACTKPPSLCIVTEFMSGGSVYD-YLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRD 415
+ +V E GG ++D +H++K F + V G+ YLH++NI+HRD
Sbjct: 104 FFEDKRNYYLVMECYKGGELFDEIIHRMK--FNEVDAAVIIKQVLSGVTYLHKHNIVHRD 161
Query: 416 LKAANLLMDENE---VVKVADFGVARVKAQSGVMTAETGTYRWMAPEVIEHKPYDHKADV 472
LK NLL++ E ++K+ DFG++ V M GT ++APEV+ K YD K DV
Sbjct: 162 LKPENLLLESKEKDALIKIVDFGLSAVFENQKKMKERLGTAYYIAPEVL-RKKYDEKCDV 220
Query: 473 FSFGIVLWELLTGKLPYEYLTPLQAAVGVVQKVHHSF 509
+S G++L+ LL G P+ T Q + V+K ++F
Sbjct: 221 WSIGVILFILLAGYPPFGGQTD-QEILRKVEKGKYTF 256
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 107 bits (268), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 83/277 (29%), Positives = 138/277 (49%), Gaps = 34/277 (12%)
Query: 255 SHRSSSPTSEPEDTGMKSHPYHLKIPNDGTD--VWEIDPKHLKFGSKVASGSYGDLYRGT 312
S S SPT E + +G++ H ++ P +D V I + + ++ G++G ++
Sbjct: 5 SGSSLSPT-EGKGSGLQGHI--IENPQYFSDACVHHIKRRDIVLKWELGEGAFGKVFLAE 61
Query: 313 YC-----SQD---VAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQFIGACTKPPSL 364
C QD VA+K LK + +++F +E ++ ++H+++V+F G CT+ L
Sbjct: 62 -CHNLLPEQDKMLVAVKALK--EASESARQDFQREAELLTMLQHQHIVRFFGVCTEGRPL 118
Query: 365 CIVTEFMSGGSVYDYLHK--------------LKGVFKLPSLLKVAIDVSKGMNYLHQNN 410
+V E+M G + +L G L LL VA V+ GM YL +
Sbjct: 119 LMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGLH 178
Query: 411 IIHRDLKAANLLMDENEVVKVADFGVARVKAQSGVMTAETGTY---RWMAPEVIEHKPYD 467
+HRDL N L+ + VVK+ DFG++R + T RWM PE I ++ +
Sbjct: 179 FVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFT 238
Query: 468 HKADVFSFGIVLWELLT-GKLPYEYLTPLQAAVGVVQ 503
++DV+SFG+VLWE+ T GK P+ L+ +A + Q
Sbjct: 239 TESDVWSFGVVLWEIFTYGKQPWYQLSNTEAIDCITQ 275
>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Piperidine-Carboxamide Inhibitor 2
Length = 327
Score = 107 bits (268), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 68/226 (30%), Positives = 111/226 (49%), Gaps = 21/226 (9%)
Query: 284 TDVWEIDPKHLKFGSKVASGSYGDLYRGTYCSQ-------DVAIKVLKPERINSDMQKEF 336
+D+ E+ K++ + G++G++Y G VA+K L PE + + +F
Sbjct: 23 SDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTL-PEVCSEQDELDF 81
Query: 337 AQEVFIMRKVRHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPS----- 391
E I+ K H+N+V+ IG + I+ E M+GG + +L + + PS
Sbjct: 82 LMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAML 141
Query: 392 -LLKVAIDVSKGMNYLHQNNIIHRDLKAANLLM---DENEVVKVADFGVARVKAQSGVMT 447
LL VA D++ G YL +N+ IHRD+ A N L+ V K+ DFG+AR ++
Sbjct: 142 DLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYR 201
Query: 448 AETGTY---RWMAPEVIEHKPYDHKADVFSFGIVLWELLT-GKLPY 489
+WM PE + K D +SFG++LWE+ + G +PY
Sbjct: 202 KGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPY 247
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 107 bits (268), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 65/212 (30%), Positives = 108/212 (50%), Gaps = 14/212 (6%)
Query: 285 DVWEIDPKHLKFGSKVASGSYGDLYRGTY------CSQDVAIKVLKPERINSDMQKEFAQ 338
D + + +HLKF ++ G++G + Y + VA+K L + + ++F +
Sbjct: 9 DPTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKL--QHSTEEHLRDFER 66
Query: 339 EVFIMRKVRHKNVVQFIGACTKPP--SLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVA 396
E+ I++ ++H N+V++ G C +L ++ E++ GS+ DYL K K LL+
Sbjct: 67 EIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYT 126
Query: 397 IDVSKGMNYLHQNNIIHRDLKAANLLMDENEVVKVADFGVARV----KAQSGVMTAETGT 452
+ KGM YL IHRDL N+L++ VK+ DFG+ +V K V
Sbjct: 127 SQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESP 186
Query: 453 YRWMAPEVIEHKPYDHKADVFSFGIVLWELLT 484
W APE + + +DV+SFG+VL+EL T
Sbjct: 187 IFWYAPESLTESKFSVASDVWSFGVVLYELFT 218
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 107 bits (268), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 65/212 (30%), Positives = 108/212 (50%), Gaps = 14/212 (6%)
Query: 285 DVWEIDPKHLKFGSKVASGSYGDLYRGTY------CSQDVAIKVLKPERINSDMQKEFAQ 338
D + + +HLKF ++ G++G + Y + VA+K L + + ++F +
Sbjct: 7 DPTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKL--QHSTEEHLRDFER 64
Query: 339 EVFIMRKVRHKNVVQFIGACTKPP--SLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVA 396
E+ I++ ++H N+V++ G C +L ++ E++ GS+ DYL K K LL+
Sbjct: 65 EIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYT 124
Query: 397 IDVSKGMNYLHQNNIIHRDLKAANLLMDENEVVKVADFGVARV----KAQSGVMTAETGT 452
+ KGM YL IHRDL N+L++ VK+ DFG+ +V K V
Sbjct: 125 SQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESP 184
Query: 453 YRWMAPEVIEHKPYDHKADVFSFGIVLWELLT 484
W APE + + +DV+SFG+VL+EL T
Sbjct: 185 IFWYAPESLTESKFSVASDVWSFGVVLYELFT 216
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 107 bits (268), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 65/212 (30%), Positives = 108/212 (50%), Gaps = 14/212 (6%)
Query: 285 DVWEIDPKHLKFGSKVASGSYGDLYRGTY------CSQDVAIKVLKPERINSDMQKEFAQ 338
D + + +HLKF ++ G++G + Y + VA+K L + + ++F +
Sbjct: 34 DPTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKL--QHSTEEHLRDFER 91
Query: 339 EVFIMRKVRHKNVVQFIGACTKPP--SLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVA 396
E+ I++ ++H N+V++ G C +L ++ E++ GS+ DYL K K LL+
Sbjct: 92 EIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYT 151
Query: 397 IDVSKGMNYLHQNNIIHRDLKAANLLMDENEVVKVADFGVARV----KAQSGVMTAETGT 452
+ KGM YL IHRDL N+L++ VK+ DFG+ +V K V
Sbjct: 152 SQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESP 211
Query: 453 YRWMAPEVIEHKPYDHKADVFSFGIVLWELLT 484
W APE + + +DV+SFG+VL+EL T
Sbjct: 212 IFWYAPESLTESKFSVASDVWSFGVVLYELFT 243
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 107 bits (268), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 61/194 (31%), Positives = 104/194 (53%), Gaps = 4/194 (2%)
Query: 300 VASGSYGD--LYRGTYCSQDVAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQFIGA 357
+ G++ L R ++VA+K++ ++N ++ +EV IM+ + H N+V+
Sbjct: 23 IGKGNFAKVKLARHVLTGREVAVKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEV 82
Query: 358 CTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDLK 417
+L +V E+ SGG V+DYL G K + + Y HQ I+HRDLK
Sbjct: 83 IETEKTLYLVMEYASGGEVFDYLVA-HGRMKEKEARAKFRQIVSAVQYCHQKYIVHRDLK 141
Query: 418 AANLLMDENEVVKVADFGVARVKAQSGVMTAETGTYRWMAPEVIEHKPYDH-KADVFSFG 476
A NLL+D + +K+ADFG + + G+ + APE+ + K YD + DV+S G
Sbjct: 142 AENLLLDGDMNIKIADFGFSNEFTVGNKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLG 201
Query: 477 IVLWELLTGKLPYE 490
++L+ L++G LP++
Sbjct: 202 VILYTLVSGSLPFD 215
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 107 bits (268), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 70/228 (30%), Positives = 118/228 (51%), Gaps = 26/228 (11%)
Query: 287 WEIDPKHLKFGSKVASGSYGDLYRGTYCSQ-------DVAIKVLKPERINSDMQKEFAQE 339
WE +L+FG + +G++G + T VA+K+LK ++D ++ E
Sbjct: 41 WEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLK-STAHADEKEALMSE 99
Query: 340 VFIMRKV-RHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKL-PS------ 391
+ IM + +H+N+V +GACT + ++TE+ G + ++L + V + P+
Sbjct: 100 LKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANS 159
Query: 392 ------LLKVAIDVSKGMNYLHQNNIIHRDLKAANLLMDENEVVKVADFGVAR-VKAQSG 444
LL + V++GM +L N IHRD+ A N+L+ V K+ DFG+AR + S
Sbjct: 160 TASTRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSN 219
Query: 445 VMTAETGTY--RWMAPEVIEHKPYDHKADVFSFGIVLWELLT-GKLPY 489
+ +WMAPE I Y ++DV+S+GI+LWE+ + G PY
Sbjct: 220 YIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPY 267
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 107 bits (268), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 70/221 (31%), Positives = 108/221 (48%), Gaps = 15/221 (6%)
Query: 296 FGSKVASGSYGDLYRGTYCSQD-----VAIKVLKPERINSDMQ-KEFAQEVFIMRKVRHK 349
F + G +G +Y GT D A+K L RI + +F E IM+ H
Sbjct: 52 FNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSL--NRITDIGEVSQFLTEGIIMKDFSHP 109
Query: 350 NVVQFIGACTKPP-SLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQ 408
NV+ +G C + S +V +M G + +++ + L+ + V+KGM YL
Sbjct: 110 NVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLAS 169
Query: 409 NNIIHRDLKAANLLMDENEVVKVADFGVARVKAQSGVMTAETGT-----YRWMAPEVIEH 463
+HRDL A N ++DE VKVADFG+AR + T +WMA E ++
Sbjct: 170 KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQT 229
Query: 464 KPYDHKADVFSFGIVLWELLT-GKLPYEYLTPLQAAVGVVQ 503
+ + K+DV+SFG++LWEL+T G PY + V ++Q
Sbjct: 230 QKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQ 270
>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma
Kinase In Complex With Ch5424802
Length = 344
Score = 107 bits (268), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 68/226 (30%), Positives = 111/226 (49%), Gaps = 21/226 (9%)
Query: 284 TDVWEIDPKHLKFGSKVASGSYGDLYRGTYCSQ-------DVAIKVLKPERINSDMQKEF 336
+D+ E+ K++ + G++G++Y G VA+K L PE + + +F
Sbjct: 39 SDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTL-PEVCSEQDELDF 97
Query: 337 AQEVFIMRKVRHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPS----- 391
E I+ K H+N+V+ IG + I+ E M+GG + +L + + PS
Sbjct: 98 LMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAML 157
Query: 392 -LLKVAIDVSKGMNYLHQNNIIHRDLKAANLLM---DENEVVKVADFGVARVKAQSGVMT 447
LL VA D++ G YL +N+ IHRD+ A N L+ V K+ DFG+AR ++
Sbjct: 158 DLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYR 217
Query: 448 AETGTY---RWMAPEVIEHKPYDHKADVFSFGIVLWELLT-GKLPY 489
+WM PE + K D +SFG++LWE+ + G +PY
Sbjct: 218 KGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPY 263
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 107 bits (268), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 71/230 (30%), Positives = 118/230 (51%), Gaps = 23/230 (10%)
Query: 285 DVWEIDPKHLKFGSKVASGSYGDLYRGTYCSQDVAIKVLKPERINSDMQKE----FAQEV 340
D WEI ++ G++G +Y+ +Q+ VL ++ +E + E+
Sbjct: 37 DFWEI-------IGELGDGAFGKVYK----AQNKETSVLAAAKVIDTKSEEELEDYMVEI 85
Query: 341 FIMRKVRHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVS 400
I+ H N+V+ + A +L I+ EF +GG+V + +L+ + V
Sbjct: 86 DILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTL 145
Query: 401 KGMNYLHQNNIIHRDLKAANLLMDENEVVKVADFGVARVKAQSGVMTAET--GTYRWMAP 458
+NYLH N IIHRDLKA N+L + +K+ADFGV+ K + ++ GT WMAP
Sbjct: 146 DALNYLHDNKIIHRDLKAGNILFTLDGDIKLADFGVS-AKNTRTIQRRDSFIGTPYWMAP 204
Query: 459 EVI-----EHKPYDHKADVFSFGIVLWELLTGKLPYEYLTPLQAAVGVVQ 503
EV+ + +PYD+KADV+S GI L E+ + P+ L P++ + + +
Sbjct: 205 EVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPPHHELNPMRVLLKIAK 254
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 107 bits (268), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 65/212 (30%), Positives = 108/212 (50%), Gaps = 14/212 (6%)
Query: 285 DVWEIDPKHLKFGSKVASGSYGDLYRGTY------CSQDVAIKVLKPERINSDMQKEFAQ 338
D + + +HLKF ++ G++G + Y + VA+K L + + ++F +
Sbjct: 3 DPTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKL--QHSTEEHLRDFER 60
Query: 339 EVFIMRKVRHKNVVQFIGACTKPP--SLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVA 396
E+ I++ ++H N+V++ G C +L ++ E++ GS+ DYL K K LL+
Sbjct: 61 EIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYT 120
Query: 397 IDVSKGMNYLHQNNIIHRDLKAANLLMDENEVVKVADFGVARV----KAQSGVMTAETGT 452
+ KGM YL IHRDL N+L++ VK+ DFG+ +V K V
Sbjct: 121 SQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESP 180
Query: 453 YRWMAPEVIEHKPYDHKADVFSFGIVLWELLT 484
W APE + + +DV+SFG+VL+EL T
Sbjct: 181 IFWYAPESLTESKFSVASDVWSFGVVLYELFT 212
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 107 bits (268), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 65/212 (30%), Positives = 108/212 (50%), Gaps = 14/212 (6%)
Query: 285 DVWEIDPKHLKFGSKVASGSYGDLYRGTY------CSQDVAIKVLKPERINSDMQKEFAQ 338
D + + +HLKF ++ G++G + Y + VA+K L + + ++F +
Sbjct: 2 DPTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKL--QHSTEEHLRDFER 59
Query: 339 EVFIMRKVRHKNVVQFIGACTKPP--SLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVA 396
E+ I++ ++H N+V++ G C +L ++ E++ GS+ DYL K K LL+
Sbjct: 60 EIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYT 119
Query: 397 IDVSKGMNYLHQNNIIHRDLKAANLLMDENEVVKVADFGVARV----KAQSGVMTAETGT 452
+ KGM YL IHRDL N+L++ VK+ DFG+ +V K V
Sbjct: 120 SQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESP 179
Query: 453 YRWMAPEVIEHKPYDHKADVFSFGIVLWELLT 484
W APE + + +DV+SFG+VL+EL T
Sbjct: 180 IFWYAPESLTESKFSVASDVWSFGVVLYELFT 211
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 107 bits (268), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 70/228 (30%), Positives = 118/228 (51%), Gaps = 26/228 (11%)
Query: 287 WEIDPKHLKFGSKVASGSYGDLYRGTYCSQ-------DVAIKVLKPERINSDMQKEFAQE 339
WE +L+FG + +G++G + T VA+K+LK ++D ++ E
Sbjct: 41 WEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLK-STAHADEKEALMSE 99
Query: 340 VFIMRKV-RHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKL-PS------ 391
+ IM + +H+N+V +GACT + ++TE+ G + ++L + V + P+
Sbjct: 100 LKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANS 159
Query: 392 ------LLKVAIDVSKGMNYLHQNNIIHRDLKAANLLMDENEVVKVADFGVAR-VKAQSG 444
LL + V++GM +L N IHRD+ A N+L+ V K+ DFG+AR + S
Sbjct: 160 TLSTRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSN 219
Query: 445 VMTAETGTY--RWMAPEVIEHKPYDHKADVFSFGIVLWELLT-GKLPY 489
+ +WMAPE I Y ++DV+S+GI+LWE+ + G PY
Sbjct: 220 YIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPY 267
>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4DCE|B Chain B, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4FOD|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 36
Length = 333
Score = 107 bits (268), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 68/226 (30%), Positives = 111/226 (49%), Gaps = 21/226 (9%)
Query: 284 TDVWEIDPKHLKFGSKVASGSYGDLYRGTYCSQ-------DVAIKVLKPERINSDMQKEF 336
+D+ E+ K++ + G++G++Y G VA+K L PE + + +F
Sbjct: 29 SDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTL-PEVCSEQDELDF 87
Query: 337 AQEVFIMRKVRHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPS----- 391
E I+ K H+N+V+ IG + I+ E M+GG + +L + + PS
Sbjct: 88 LMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAML 147
Query: 392 -LLKVAIDVSKGMNYLHQNNIIHRDLKAANLLM---DENEVVKVADFGVARVKAQSGVMT 447
LL VA D++ G YL +N+ IHRD+ A N L+ V K+ DFG+AR ++
Sbjct: 148 DLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYR 207
Query: 448 AETGTY---RWMAPEVIEHKPYDHKADVFSFGIVLWELLT-GKLPY 489
+WM PE + K D +SFG++LWE+ + G +PY
Sbjct: 208 KGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPY 253
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 107 bits (268), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 65/212 (30%), Positives = 108/212 (50%), Gaps = 14/212 (6%)
Query: 285 DVWEIDPKHLKFGSKVASGSYGDLYRGTY------CSQDVAIKVLKPERINSDMQKEFAQ 338
D + + +HLKF ++ G++G + Y + VA+K L + + ++F +
Sbjct: 1 DPTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKL--QHSTEEHLRDFER 58
Query: 339 EVFIMRKVRHKNVVQFIGACTKPP--SLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVA 396
E+ I++ ++H N+V++ G C +L ++ E++ GS+ DYL K K LL+
Sbjct: 59 EIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYT 118
Query: 397 IDVSKGMNYLHQNNIIHRDLKAANLLMDENEVVKVADFGVARV----KAQSGVMTAETGT 452
+ KGM YL IHRDL N+L++ VK+ DFG+ +V K V
Sbjct: 119 SQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESP 178
Query: 453 YRWMAPEVIEHKPYDHKADVFSFGIVLWELLT 484
W APE + + +DV+SFG+VL+EL T
Sbjct: 179 IFWYAPESLTESKFSVASDVWSFGVVLYELFT 210
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 107 bits (268), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 65/212 (30%), Positives = 108/212 (50%), Gaps = 14/212 (6%)
Query: 285 DVWEIDPKHLKFGSKVASGSYGDLYRGTY------CSQDVAIKVLKPERINSDMQKEFAQ 338
D + + +HLKF ++ G++G + Y + VA+K L + + ++F +
Sbjct: 10 DPTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKL--QHSTEEHLRDFER 67
Query: 339 EVFIMRKVRHKNVVQFIGACTKPP--SLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVA 396
E+ I++ ++H N+V++ G C +L ++ E++ GS+ DYL K K LL+
Sbjct: 68 EIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYT 127
Query: 397 IDVSKGMNYLHQNNIIHRDLKAANLLMDENEVVKVADFGVARV----KAQSGVMTAETGT 452
+ KGM YL IHRDL N+L++ VK+ DFG+ +V K V
Sbjct: 128 SQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESP 187
Query: 453 YRWMAPEVIEHKPYDHKADVFSFGIVLWELLT 484
W APE + + +DV+SFG+VL+EL T
Sbjct: 188 IFWYAPESLTESKFSVASDVWSFGVVLYELFT 219
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 107 bits (268), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 70/221 (31%), Positives = 108/221 (48%), Gaps = 15/221 (6%)
Query: 296 FGSKVASGSYGDLYRGTYCSQD-----VAIKVLKPERINSDMQ-KEFAQEVFIMRKVRHK 349
F + G +G +Y GT D A+K L RI + +F E IM+ H
Sbjct: 34 FNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSL--NRITDIGEVSQFLTEGIIMKDFSHP 91
Query: 350 NVVQFIGACTKPP-SLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQ 408
NV+ +G C + S +V +M G + +++ + L+ + V+KGM YL
Sbjct: 92 NVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLAS 151
Query: 409 NNIIHRDLKAANLLMDENEVVKVADFGVARVKAQSGVMTAETGT-----YRWMAPEVIEH 463
+HRDL A N ++DE VKVADFG+AR + T +WMA E ++
Sbjct: 152 KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQT 211
Query: 464 KPYDHKADVFSFGIVLWELLT-GKLPYEYLTPLQAAVGVVQ 503
+ + K+DV+SFG++LWEL+T G PY + V ++Q
Sbjct: 212 QKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQ 252
>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 107 bits (268), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 68/226 (30%), Positives = 111/226 (49%), Gaps = 21/226 (9%)
Query: 284 TDVWEIDPKHLKFGSKVASGSYGDLYRGTYCSQ-------DVAIKVLKPERINSDMQKEF 336
+D+ E+ K++ + G++G++Y G VA+K L PE + + +F
Sbjct: 37 SDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTL-PEVCSEQDELDF 95
Query: 337 AQEVFIMRKVRHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPS----- 391
E I+ K H+N+V+ IG + I+ E M+GG + +L + + PS
Sbjct: 96 LMEALIISKFNHQNIVRCIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAML 155
Query: 392 -LLKVAIDVSKGMNYLHQNNIIHRDLKAANLLM---DENEVVKVADFGVARVKAQSGVMT 447
LL VA D++ G YL +N+ IHRD+ A N L+ V K+ DFG+AR ++
Sbjct: 156 DLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYR 215
Query: 448 AETGTY---RWMAPEVIEHKPYDHKADVFSFGIVLWELLT-GKLPY 489
+WM PE + K D +SFG++LWE+ + G +PY
Sbjct: 216 KGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPY 261
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 107 bits (268), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 70/221 (31%), Positives = 108/221 (48%), Gaps = 15/221 (6%)
Query: 296 FGSKVASGSYGDLYRGTYCSQD-----VAIKVLKPERINSDMQ-KEFAQEVFIMRKVRHK 349
F + G +G +Y GT D A+K L RI + +F E IM+ H
Sbjct: 29 FNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSL--NRITDIGEVSQFLTEGIIMKDFSHP 86
Query: 350 NVVQFIGACTKPP-SLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQ 408
NV+ +G C + S +V +M G + +++ + L+ + V+KGM YL
Sbjct: 87 NVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLAS 146
Query: 409 NNIIHRDLKAANLLMDENEVVKVADFGVARVKAQSGVMTAETGT-----YRWMAPEVIEH 463
+HRDL A N ++DE VKVADFG+AR + T +WMA E ++
Sbjct: 147 KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQT 206
Query: 464 KPYDHKADVFSFGIVLWELLT-GKLPYEYLTPLQAAVGVVQ 503
+ + K+DV+SFG++LWEL+T G PY + V ++Q
Sbjct: 207 QKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQ 247
>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In
Complex With Crizotinib
Length = 327
Score = 107 bits (268), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 68/226 (30%), Positives = 111/226 (49%), Gaps = 21/226 (9%)
Query: 284 TDVWEIDPKHLKFGSKVASGSYGDLYRGTYCSQ-------DVAIKVLKPERINSDMQKEF 336
+D+ E+ K++ + G++G++Y G VA+K L PE + + +F
Sbjct: 22 SDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTL-PEVCSEQDELDF 80
Query: 337 AQEVFIMRKVRHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPS----- 391
E I+ K H+N+V+ IG + I+ E M+GG + +L + + PS
Sbjct: 81 LMEALIISKFNHQNIVRCIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAML 140
Query: 392 -LLKVAIDVSKGMNYLHQNNIIHRDLKAANLLM---DENEVVKVADFGVARVKAQSGVMT 447
LL VA D++ G YL +N+ IHRD+ A N L+ V K+ DFG+AR ++
Sbjct: 141 DLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYR 200
Query: 448 AETGTY---RWMAPEVIEHKPYDHKADVFSFGIVLWELLT-GKLPY 489
+WM PE + K D +SFG++LWE+ + G +PY
Sbjct: 201 KGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPY 246
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 107 bits (268), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 70/221 (31%), Positives = 108/221 (48%), Gaps = 15/221 (6%)
Query: 296 FGSKVASGSYGDLYRGTYCSQD-----VAIKVLKPERINSDMQ-KEFAQEVFIMRKVRHK 349
F + G +G +Y GT D A+K L RI + +F E IM+ H
Sbjct: 33 FNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSL--NRITDIGEVSQFLTEGIIMKDFSHP 90
Query: 350 NVVQFIGACTKPP-SLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQ 408
NV+ +G C + S +V +M G + +++ + L+ + V+KGM YL
Sbjct: 91 NVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLAS 150
Query: 409 NNIIHRDLKAANLLMDENEVVKVADFGVARVKAQSGVMTAETGT-----YRWMAPEVIEH 463
+HRDL A N ++DE VKVADFG+AR + T +WMA E ++
Sbjct: 151 KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQT 210
Query: 464 KPYDHKADVFSFGIVLWELLT-GKLPYEYLTPLQAAVGVVQ 503
+ + K+DV+SFG++LWEL+T G PY + V ++Q
Sbjct: 211 QKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQ 251
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 107 bits (267), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 71/230 (30%), Positives = 118/230 (51%), Gaps = 23/230 (10%)
Query: 285 DVWEIDPKHLKFGSKVASGSYGDLYRGTYCSQDVAIKVLKPERINSDMQKE----FAQEV 340
D WEI ++ G++G +Y+ +Q+ VL ++ +E + E+
Sbjct: 37 DFWEI-------IGELGDGAFGKVYK----AQNKETSVLAAAKVIDTKSEEELEDYMVEI 85
Query: 341 FIMRKVRHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVS 400
I+ H N+V+ + A +L I+ EF +GG+V + +L+ + V
Sbjct: 86 DILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTL 145
Query: 401 KGMNYLHQNNIIHRDLKAANLLMDENEVVKVADFGVARVKAQSGVMTAET--GTYRWMAP 458
+NYLH N IIHRDLKA N+L + +K+ADFGV+ K + ++ GT WMAP
Sbjct: 146 DALNYLHDNKIIHRDLKAGNILFTLDGDIKLADFGVS-AKNTRXIQRRDSFIGTPYWMAP 204
Query: 459 EVI-----EHKPYDHKADVFSFGIVLWELLTGKLPYEYLTPLQAAVGVVQ 503
EV+ + +PYD+KADV+S GI L E+ + P+ L P++ + + +
Sbjct: 205 EVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPPHHELNPMRVLLKIAK 254
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 107 bits (267), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 70/221 (31%), Positives = 108/221 (48%), Gaps = 15/221 (6%)
Query: 296 FGSKVASGSYGDLYRGTYCSQD-----VAIKVLKPERINSDMQ-KEFAQEVFIMRKVRHK 349
F + G +G +Y GT D A+K L RI + +F E IM+ H
Sbjct: 32 FNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSL--NRITDIGEVSQFLTEGIIMKDFSHP 89
Query: 350 NVVQFIGACTKPP-SLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQ 408
NV+ +G C + S +V +M G + +++ + L+ + V+KGM YL
Sbjct: 90 NVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLAS 149
Query: 409 NNIIHRDLKAANLLMDENEVVKVADFGVARVKAQSGVMTAETGT-----YRWMAPEVIEH 463
+HRDL A N ++DE VKVADFG+AR + T +WMA E ++
Sbjct: 150 KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQT 209
Query: 464 KPYDHKADVFSFGIVLWELLT-GKLPYEYLTPLQAAVGVVQ 503
+ + K+DV+SFG++LWEL+T G PY + V ++Q
Sbjct: 210 QKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQ 250
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 107 bits (267), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 70/221 (31%), Positives = 108/221 (48%), Gaps = 15/221 (6%)
Query: 296 FGSKVASGSYGDLYRGTYCSQD-----VAIKVLKPERINSDMQ-KEFAQEVFIMRKVRHK 349
F + G +G +Y GT D A+K L RI + +F E IM+ H
Sbjct: 53 FNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSL--NRITDIGEVSQFLTEGIIMKDFSHP 110
Query: 350 NVVQFIGACTKPP-SLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQ 408
NV+ +G C + S +V +M G + +++ + L+ + V+KGM YL
Sbjct: 111 NVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLAS 170
Query: 409 NNIIHRDLKAANLLMDENEVVKVADFGVARVKAQSGVMTAETGT-----YRWMAPEVIEH 463
+HRDL A N ++DE VKVADFG+AR + T +WMA E ++
Sbjct: 171 KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQT 230
Query: 464 KPYDHKADVFSFGIVLWELLT-GKLPYEYLTPLQAAVGVVQ 503
+ + K+DV+SFG++LWEL+T G PY + V ++Q
Sbjct: 231 QKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQ 271
>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In
Complex With Crizotinib (Pf-02341066)
Length = 327
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 68/226 (30%), Positives = 111/226 (49%), Gaps = 21/226 (9%)
Query: 284 TDVWEIDPKHLKFGSKVASGSYGDLYRGTYCSQ-------DVAIKVLKPERINSDMQKEF 336
+D+ E+ K++ + G++G++Y G VA+K L PE + + +F
Sbjct: 22 SDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTL-PEVCSEQDELDF 80
Query: 337 AQEVFIMRKVRHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPS----- 391
E I+ K H+N+V+ IG + I+ E M+GG + +L + + PS
Sbjct: 81 LMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAML 140
Query: 392 -LLKVAIDVSKGMNYLHQNNIIHRDLKAANLLM---DENEVVKVADFGVARVKAQSGVMT 447
LL VA D++ G YL +N+ IHRD+ A N L+ V K+ DFG+AR ++
Sbjct: 141 DLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYR 200
Query: 448 AETGTY---RWMAPEVIEHKPYDHKADVFSFGIVLWELLT-GKLPY 489
+WM PE + K D +SFG++LWE+ + G +PY
Sbjct: 201 KGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPY 246
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 72/216 (33%), Positives = 121/216 (56%), Gaps = 10/216 (4%)
Query: 300 VASGSYGDLYRGTYCSQDVAIKVLK-PERINSDMQKEFAQEVFIMRKVRHKNVVQFIGAC 358
+ G+YG +Y G S V I + + PER +S + +E+ + + ++HKN+VQ++G+
Sbjct: 16 LGKGTYGIVYAGRDLSNQVRIAIKEIPER-DSRYSQPLHEEIALHKHLKHKNIVQYLGSF 74
Query: 359 TKPPSLCIVTEFMSGGSVYDYLHKLKGVFK--LPSLLKVAIDVSKGMNYLHQNNIIHRDL 416
++ + I E + GGS+ L G K ++ + +G+ YLH N I+HRD+
Sbjct: 75 SENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDNQIVHRDI 134
Query: 417 KAANLLMDE-NEVVKVADFGVA-RVKAQSGVMTAETGTYRWMAPEVIEHKP--YDHKADV 472
K N+L++ + V+K++DFG + R+ + TGT ++MAPE+I+ P Y AD+
Sbjct: 135 KGDNVLINTYSGVLKISDFGTSKRLAGINPCTETFTGTLQYMAPEIIDKGPRGYGKAADI 194
Query: 473 FSFGIVLWELLTGKLPYEYLTPLQAAVGVVQ--KVH 506
+S G + E+ TGK P+ L QAA+ V KVH
Sbjct: 195 WSLGCTIIEMATGKPPFYELGEPQAAMFKVGMFKVH 230
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 70/221 (31%), Positives = 108/221 (48%), Gaps = 15/221 (6%)
Query: 296 FGSKVASGSYGDLYRGTYCSQD-----VAIKVLKPERINSDMQ-KEFAQEVFIMRKVRHK 349
F + G +G +Y GT D A+K L RI + +F E IM+ H
Sbjct: 34 FNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSL--NRITDIGEVSQFLTEGIIMKDFSHP 91
Query: 350 NVVQFIGACTKPP-SLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQ 408
NV+ +G C + S +V +M G + +++ + L+ + V+KGM YL
Sbjct: 92 NVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLAS 151
Query: 409 NNIIHRDLKAANLLMDENEVVKVADFGVARVKAQSGVMTAETGT-----YRWMAPEVIEH 463
+HRDL A N ++DE VKVADFG+AR + T +WMA E ++
Sbjct: 152 KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQT 211
Query: 464 KPYDHKADVFSFGIVLWELLT-GKLPYEYLTPLQAAVGVVQ 503
+ + K+DV+SFG++LWEL+T G PY + V ++Q
Sbjct: 212 QKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQ 252
>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Nvp- Tae684
pdb|2XBA|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Pha-E429
Length = 315
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 68/226 (30%), Positives = 111/226 (49%), Gaps = 21/226 (9%)
Query: 284 TDVWEIDPKHLKFGSKVASGSYGDLYRGTYCSQ-------DVAIKVLKPERINSDMQKEF 336
+D+ E+ K++ + G++G++Y G VA+K L PE + + +F
Sbjct: 14 SDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTL-PEVCSEQDELDF 72
Query: 337 AQEVFIMRKVRHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPS----- 391
E I+ K H+N+V+ IG + I+ E M+GG + +L + + PS
Sbjct: 73 LMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAML 132
Query: 392 -LLKVAIDVSKGMNYLHQNNIIHRDLKAANLLM---DENEVVKVADFGVARVKAQSGVMT 447
LL VA D++ G YL +N+ IHRD+ A N L+ V K+ DFG+AR ++
Sbjct: 133 DLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYR 192
Query: 448 AETGTY---RWMAPEVIEHKPYDHKADVFSFGIVLWELLT-GKLPY 489
+WM PE + K D +SFG++LWE+ + G +PY
Sbjct: 193 KGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPY 238
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 70/221 (31%), Positives = 108/221 (48%), Gaps = 15/221 (6%)
Query: 296 FGSKVASGSYGDLYRGTYCSQD-----VAIKVLKPERINSDMQ-KEFAQEVFIMRKVRHK 349
F + G +G +Y GT D A+K L RI + +F E IM+ H
Sbjct: 26 FNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSL--NRITDIGEVSQFLTEGIIMKDFSHP 83
Query: 350 NVVQFIGACTKPP-SLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQ 408
NV+ +G C + S +V +M G + +++ + L+ + V+KGM YL
Sbjct: 84 NVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLAS 143
Query: 409 NNIIHRDLKAANLLMDENEVVKVADFGVARVKAQSGVMTAETGT-----YRWMAPEVIEH 463
+HRDL A N ++DE VKVADFG+AR + T +WMA E ++
Sbjct: 144 KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQT 203
Query: 464 KPYDHKADVFSFGIVLWELLT-GKLPYEYLTPLQAAVGVVQ 503
+ + K+DV+SFG++LWEL+T G PY + V ++Q
Sbjct: 204 QKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQ 244
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 70/221 (31%), Positives = 108/221 (48%), Gaps = 15/221 (6%)
Query: 296 FGSKVASGSYGDLYRGTYCSQD-----VAIKVLKPERINSDMQ-KEFAQEVFIMRKVRHK 349
F + G +G +Y GT D A+K L RI + +F E IM+ H
Sbjct: 31 FNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSL--NRITDIGEVSQFLTEGIIMKDFSHP 88
Query: 350 NVVQFIGACTKPP-SLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQ 408
NV+ +G C + S +V +M G + +++ + L+ + V+KGM YL
Sbjct: 89 NVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLAS 148
Query: 409 NNIIHRDLKAANLLMDENEVVKVADFGVARVKAQSGVMTAETGT-----YRWMAPEVIEH 463
+HRDL A N ++DE VKVADFG+AR + T +WMA E ++
Sbjct: 149 KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQT 208
Query: 464 KPYDHKADVFSFGIVLWELLT-GKLPYEYLTPLQAAVGVVQ 503
+ + K+DV+SFG++LWEL+T G PY + V ++Q
Sbjct: 209 QKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQ 249
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 65/212 (30%), Positives = 108/212 (50%), Gaps = 14/212 (6%)
Query: 285 DVWEIDPKHLKFGSKVASGSYGDLYRGTY------CSQDVAIKVLKPERINSDMQKEFAQ 338
D + + +HLKF ++ G++G + Y + VA+K L + + ++F +
Sbjct: 6 DPTQFEERHLKFLRQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKL--QHSTEEHLRDFER 63
Query: 339 EVFIMRKVRHKNVVQFIGACTKPP--SLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVA 396
E+ I++ ++H N+V++ G C +L ++ EF+ GS+ +YL K K LL+
Sbjct: 64 EIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEFLPYGSLREYLQKHKERIDHIKLLQYT 123
Query: 397 IDVSKGMNYLHQNNIIHRDLKAANLLMDENEVVKVADFGVARV----KAQSGVMTAETGT 452
+ KGM YL IHRDL N+L++ VK+ DFG+ +V K V
Sbjct: 124 SQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESP 183
Query: 453 YRWMAPEVIEHKPYDHKADVFSFGIVLWELLT 484
W APE + + +DV+SFG+VL+EL T
Sbjct: 184 IFWYAPESLTESKFSVASDVWSFGVVLYELFT 215
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 65/214 (30%), Positives = 115/214 (53%), Gaps = 12/214 (5%)
Query: 290 DPK--HLKFGSKVASGSYGDLYRG--TYCSQDVAIKVLKPERINSDMQKEFA-QEVFIMR 344
DPK + +F K+ G+ G +Y Q+VAI+ + + +KE E+ +MR
Sbjct: 17 DPKKKYTRF-EKIGQGASGTVYTAMDVATGQEVAIRQMN---LQQQPKKELIINEILVMR 72
Query: 345 KVRHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMN 404
+ ++ N+V ++ + L +V E+++GGS+ D + + + V + + +
Sbjct: 73 ENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTET--CMDEGQIAAVCRECLQALE 130
Query: 405 YLHQNNIIHRDLKAANLLMDENEVVKVADFG-VARVKAQSGVMTAETGTYRWMAPEVIEH 463
+LH N +IHRD+K+ N+L+ + VK+ DFG A++ + + GT WMAPEV+
Sbjct: 131 FLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTR 190
Query: 464 KPYDHKADVFSFGIVLWELLTGKLPYEYLTPLQA 497
K Y K D++S GI+ E++ G+ PY PL+A
Sbjct: 191 KAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRA 224
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 70/221 (31%), Positives = 112/221 (50%), Gaps = 15/221 (6%)
Query: 296 FGSKVASGSYGDLYRGTYCSQD-----VAIKVLKPERINSDMQ-KEFAQEVFIMRKVRHK 349
F + G +G +Y GT D A+K L RI + +F E IM+ H
Sbjct: 35 FNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSL--NRITDIGEVSQFLTEGIIMKDFSHP 92
Query: 350 NVVQFIGACTKPP-SLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQ 408
NV+ +G C + S +V +M G + +++ + L+ + V+KGM +L
Sbjct: 93 NVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLAS 152
Query: 409 NNIIHRDLKAANLLMDENEVVKVADFGVAR--VKAQSGVMTAETGT---YRWMAPEVIEH 463
+HRDL A N ++DE VKVADFG+AR + + + +TG +WMA E ++
Sbjct: 153 KKFVHRDLAARNCMLDEKFTVKVADFGLARDMLDKEFDSVHNKTGAKLPVKWMALESLQT 212
Query: 464 KPYDHKADVFSFGIVLWELLT-GKLPYEYLTPLQAAVGVVQ 503
+ + K+DV+SFG++LWEL+T G PY + V ++Q
Sbjct: 213 QKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQ 253
>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 68/226 (30%), Positives = 111/226 (49%), Gaps = 21/226 (9%)
Query: 284 TDVWEIDPKHLKFGSKVASGSYGDLYRGTYCSQ-------DVAIKVLKPERINSDMQKEF 336
+D+ E+ K++ + G++G++Y G VA+K L PE + + +F
Sbjct: 37 SDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTL-PEVYSEQDELDF 95
Query: 337 AQEVFIMRKVRHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPS----- 391
E I+ K H+N+V+ IG + I+ E M+GG + +L + + PS
Sbjct: 96 LMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAML 155
Query: 392 -LLKVAIDVSKGMNYLHQNNIIHRDLKAANLLM---DENEVVKVADFGVARVKAQSGVMT 447
LL VA D++ G YL +N+ IHRD+ A N L+ V K+ DFG+AR ++
Sbjct: 156 DLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYR 215
Query: 448 AETGTY---RWMAPEVIEHKPYDHKADVFSFGIVLWELLT-GKLPY 489
+WM PE + K D +SFG++LWE+ + G +PY
Sbjct: 216 KGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPY 261
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 67/217 (30%), Positives = 117/217 (53%), Gaps = 8/217 (3%)
Query: 300 VASGSYGDLYRGTY--CSQDVAIKVLKPERIN-SDMQKEFAQEVFIMRKVRHKNVVQFIG 356
+ GS+G + T+ Q VA+K + + + SDM +E+ ++ +RH ++++
Sbjct: 17 LGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIKLYD 76
Query: 357 ACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDL 416
T P + +V E+ +GG ++DY+ + K + + + + + Y H++ I+HRDL
Sbjct: 77 VITTPTDIVMVIEY-AGGELFDYIVEKKRMTEDEGR-RFFQQIICAIEYCHRHKIVHRDL 134
Query: 417 KAANLLMDENEVVKVADFGVARVKAQSGVMTAETGTYRWMAPEVIEHKPYDH-KADVFSF 475
K NLL+D+N VK+ADFG++ + + G+ + APEVI K Y + DV+S
Sbjct: 135 KPENLLLDDNLNVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVINGKLYAGPEVDVWSC 194
Query: 476 GIVLWELLTGKLPY--EYLTPLQAAVGVVQKVHHSFL 510
GIVL+ +L G+LP+ E++ L V V FL
Sbjct: 195 GIVLYVMLVGRLPFDDEFIPNLFKKVNSCVYVMPDFL 231
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 106 bits (265), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 65/214 (30%), Positives = 115/214 (53%), Gaps = 12/214 (5%)
Query: 290 DPK--HLKFGSKVASGSYGDLYRG--TYCSQDVAIKVLKPERINSDMQKEFA-QEVFIMR 344
DPK + +F K+ G+ G +Y Q+VAI+ + + +KE E+ +MR
Sbjct: 18 DPKKKYTRF-EKIGQGASGTVYTAMDVATGQEVAIRQMN---LQQQPKKELIINEILVMR 73
Query: 345 KVRHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMN 404
+ ++ N+V ++ + L +V E+++GGS+ D + + + V + + +
Sbjct: 74 ENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTET--CMDEGQIAAVCRECLQALE 131
Query: 405 YLHQNNIIHRDLKAANLLMDENEVVKVADFG-VARVKAQSGVMTAETGTYRWMAPEVIEH 463
+LH N +IHRD+K+ N+L+ + VK+ DFG A++ + + GT WMAPEV+
Sbjct: 132 FLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSXMVGTPYWMAPEVVTR 191
Query: 464 KPYDHKADVFSFGIVLWELLTGKLPYEYLTPLQA 497
K Y K D++S GI+ E++ G+ PY PL+A
Sbjct: 192 KAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRA 225
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 106 bits (265), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 65/214 (30%), Positives = 115/214 (53%), Gaps = 12/214 (5%)
Query: 290 DPK--HLKFGSKVASGSYGDLYRG--TYCSQDVAIKVLKPERINSDMQKEFA-QEVFIMR 344
DPK + +F K+ G+ G +Y Q+VAI+ + + +KE E+ +MR
Sbjct: 17 DPKKKYTRF-EKIGQGASGTVYTAMDVATGQEVAIRQMN---LQQQPKKELIINEILVMR 72
Query: 345 KVRHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMN 404
+ ++ N+V ++ + L +V E+++GGS+ D + + + V + + +
Sbjct: 73 ENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTET--CMDEGQIAAVCRECLQALE 130
Query: 405 YLHQNNIIHRDLKAANLLMDENEVVKVADFG-VARVKAQSGVMTAETGTYRWMAPEVIEH 463
+LH N +IHRD+K+ N+L+ + VK+ DFG A++ + + GT WMAPEV+
Sbjct: 131 FLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSXMVGTPYWMAPEVVTR 190
Query: 464 KPYDHKADVFSFGIVLWELLTGKLPYEYLTPLQA 497
K Y K D++S GI+ E++ G+ PY PL+A
Sbjct: 191 KAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRA 224
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 106 bits (265), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 65/205 (31%), Positives = 108/205 (52%), Gaps = 14/205 (6%)
Query: 292 KHLKFGSKVASGSYG--DLYR----GTYCSQDVAIKVLKPERINSDMQKEFAQEVFIMRK 345
+HLK+ S++ G++G +L R G VA+K L + D Q++F +E+ I++
Sbjct: 7 RHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQL--QHSGPDQQRDFQREIQILKA 64
Query: 346 VRHKNVVQFIGACTKP--PSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGM 403
+ +V++ G P P L +V E++ G + D+L + + LL + + KGM
Sbjct: 65 LHSDFIVKYRGVSYGPGRPELRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGM 124
Query: 404 NYLHQNNIIHRDLKAANLLMDENEVVKVADFGVARV----KAQSGVMTAETGTYRWMAPE 459
YL +HRDL A N+L++ VK+ADFG+A++ K V W APE
Sbjct: 125 EYLGSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDXXVVREPGQSPIFWYAPE 184
Query: 460 VIEHKPYDHKADVFSFGIVLWELLT 484
+ + ++DV+SFG+VL+EL T
Sbjct: 185 SLSDNIFSRQSDVWSFGVVLYELFT 209
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 106 bits (265), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 73/228 (32%), Positives = 116/228 (50%), Gaps = 15/228 (6%)
Query: 276 HLKIPNDGTDVWEIDPKHLKFGSKVASGSYGDLYRGTYCSQDVAIKVLKPERI-NSDMQK 334
H+ P+ +D +E+ + L FG S L R +DVA+KVL+ + +
Sbjct: 3 HMTTPSHLSDRYELG-EILGFGGM----SEVHLARDLRDHRDVAVKVLRADLARDPSFYL 57
Query: 335 EFAQEVFIMRKVRHKNVVQF--IGACTKP--PSLCIVTEFMSGGSVYDYLHKLKGVFKLP 390
F +E + H +V G P P IV E++ G ++ D +H +G
Sbjct: 58 RFRREAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHT-EGPMTPK 116
Query: 391 SLLKVAIDVSKGMNYLHQNNIIHRDLKAANLLMDENEVVKVADFGVARVKAQSGVMTAET 450
++V D + +N+ HQN IIHRD+K AN+++ VKV DFG+AR A SG +T
Sbjct: 117 RAIEVIADACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQT 176
Query: 451 ----GTYRWMAPEVIEHKPYDHKADVFSFGIVLWELLTGKLPYEYLTP 494
GT ++++PE D ++DV+S G VL+E+LTG+ P+ +P
Sbjct: 177 AAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSP 224
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 106 bits (265), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 71/230 (30%), Positives = 117/230 (50%), Gaps = 23/230 (10%)
Query: 285 DVWEIDPKHLKFGSKVASGSYGDLYRGTYCSQDVAIKVLKPERINSDMQKE----FAQEV 340
D WEI ++ G++G +Y+ +Q+ VL ++ +E + E+
Sbjct: 37 DFWEI-------IGELGDGAFGKVYK----AQNKETSVLAAAKVIDTKSEEELEDYMVEI 85
Query: 341 FIMRKVRHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVS 400
I+ H N+V+ + A +L I+ EF +GG+V + +L+ + V
Sbjct: 86 DILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTL 145
Query: 401 KGMNYLHQNNIIHRDLKAANLLMDENEVVKVADFGVARVKAQSGVMTAE--TGTYRWMAP 458
+NYLH N IIHRDLKA N+L + +K+ADFGV+ K + + GT WMAP
Sbjct: 146 DALNYLHDNKIIHRDLKAGNILFTLDGDIKLADFGVS-AKNTRXIQRRDXFIGTPYWMAP 204
Query: 459 EVI-----EHKPYDHKADVFSFGIVLWELLTGKLPYEYLTPLQAAVGVVQ 503
EV+ + +PYD+KADV+S GI L E+ + P+ L P++ + + +
Sbjct: 205 EVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPPHHELNPMRVLLKIAK 254
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 106 bits (265), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 65/214 (30%), Positives = 115/214 (53%), Gaps = 12/214 (5%)
Query: 290 DPK--HLKFGSKVASGSYGDLYRG--TYCSQDVAIKVLKPERINSDMQKEFA-QEVFIMR 344
DPK + +F K+ G+ G +Y Q+VAI+ + + +KE E+ +MR
Sbjct: 17 DPKKKYTRF-EKIGQGASGTVYTAMDVATGQEVAIRQMN---LQQQPKKELIINEILVMR 72
Query: 345 KVRHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMN 404
+ ++ N+V ++ + L +V E+++GGS+ D + + + V + + +
Sbjct: 73 ENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTET--CMDEGQIAAVCRECLQALE 130
Query: 405 YLHQNNIIHRDLKAANLLMDENEVVKVADFG-VARVKAQSGVMTAETGTYRWMAPEVIEH 463
+LH N +IHRD+K+ N+L+ + VK+ DFG A++ + + GT WMAPEV+
Sbjct: 131 FLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSEMVGTPYWMAPEVVTR 190
Query: 464 KPYDHKADVFSFGIVLWELLTGKLPYEYLTPLQA 497
K Y K D++S GI+ E++ G+ PY PL+A
Sbjct: 191 KAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRA 224
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 106 bits (265), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 69/234 (29%), Positives = 118/234 (50%), Gaps = 31/234 (13%)
Query: 285 DVWEIDPKHLKFGSKVASGSYGDLYRGTYCS-------QDVAIKVLKPERINSDMQKEFA 337
D WE+ + + ++ GS+G +Y G VAIK + E + + EF
Sbjct: 3 DEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVN-EAASMRERIEFL 61
Query: 338 QEVFIMRKVRHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKG------VFKLPS 391
E +M++ +VV+ +G ++ ++ E M+ G + YL L+ V PS
Sbjct: 62 NEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPS 121
Query: 392 L---LKVAIDVSKGMNYLHQNNIIHRDLKAANLLMDENEVVKVADFGVAR--------VK 440
L +++A +++ GM YL+ N +HRDL A N ++ E+ VK+ DFG+ R K
Sbjct: 122 LSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIXETDXXRK 181
Query: 441 AQSGVMTAETGTYRWMAPEVIEHKPYDHKADVFSFGIVLWELLT-GKLPYEYLT 493
G++ RWM+PE ++ + +DV+SFG+VLWE+ T + PY+ L+
Sbjct: 182 GGKGLLPV-----RWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLS 230
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 106 bits (265), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 69/234 (29%), Positives = 118/234 (50%), Gaps = 31/234 (13%)
Query: 285 DVWEIDPKHLKFGSKVASGSYGDLYRGTYCS-------QDVAIKVLKPERINSDMQKEFA 337
D WE+ + + ++ GS+G +Y G VAIK + E + + EF
Sbjct: 12 DEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVN-EAASMRERIEFL 70
Query: 338 QEVFIMRKVRHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKG------VFKLPS 391
E +M++ +VV+ +G ++ ++ E M+ G + YL L+ V PS
Sbjct: 71 NEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPS 130
Query: 392 L---LKVAIDVSKGMNYLHQNNIIHRDLKAANLLMDENEVVKVADFGVAR--------VK 440
L +++A +++ GM YL+ N +HRDL A N ++ E+ VK+ DFG+ R K
Sbjct: 131 LSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIXETDXXRK 190
Query: 441 AQSGVMTAETGTYRWMAPEVIEHKPYDHKADVFSFGIVLWELLT-GKLPYEYLT 493
G++ RWM+PE ++ + +DV+SFG+VLWE+ T + PY+ L+
Sbjct: 191 GGKGLLPV-----RWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLS 239
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 106 bits (264), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 69/234 (29%), Positives = 118/234 (50%), Gaps = 31/234 (13%)
Query: 285 DVWEIDPKHLKFGSKVASGSYGDLYRGTYCS-------QDVAIKVLKPERINSDMQKEFA 337
D WE+ + + ++ GS+G +Y G VAIK + E + + EF
Sbjct: 18 DEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVN-EAASMRERIEFL 76
Query: 338 QEVFIMRKVRHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKG------VFKLPS 391
E +M++ +VV+ +G ++ ++ E M+ G + YL L+ V PS
Sbjct: 77 NEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPS 136
Query: 392 L---LKVAIDVSKGMNYLHQNNIIHRDLKAANLLMDENEVVKVADFGVAR--------VK 440
L +++A +++ GM YL+ N +HRDL A N ++ E+ VK+ DFG+ R K
Sbjct: 137 LSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRK 196
Query: 441 AQSGVMTAETGTYRWMAPEVIEHKPYDHKADVFSFGIVLWELLT-GKLPYEYLT 493
G++ RWM+PE ++ + +DV+SFG+VLWE+ T + PY+ L+
Sbjct: 197 GGKGLLPV-----RWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLS 245
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 106 bits (264), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 69/234 (29%), Positives = 118/234 (50%), Gaps = 31/234 (13%)
Query: 285 DVWEIDPKHLKFGSKVASGSYGDLYRGTYCS-------QDVAIKVLKPERINSDMQKEFA 337
D WE+ + + ++ GS+G +Y G VAIK + E + + EF
Sbjct: 18 DEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVN-EAASMRERIEFL 76
Query: 338 QEVFIMRKVRHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKG------VFKLPS 391
E +M++ +VV+ +G ++ ++ E M+ G + YL L+ V PS
Sbjct: 77 NEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPS 136
Query: 392 L---LKVAIDVSKGMNYLHQNNIIHRDLKAANLLMDENEVVKVADFGVAR--------VK 440
L +++A +++ GM YL+ N +HRDL A N ++ E+ VK+ DFG+ R K
Sbjct: 137 LSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRK 196
Query: 441 AQSGVMTAETGTYRWMAPEVIEHKPYDHKADVFSFGIVLWELLT-GKLPYEYLT 493
G++ RWM+PE ++ + +DV+SFG+VLWE+ T + PY+ L+
Sbjct: 197 GGKGLLPV-----RWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLS 245
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 106 bits (264), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 69/234 (29%), Positives = 118/234 (50%), Gaps = 31/234 (13%)
Query: 285 DVWEIDPKHLKFGSKVASGSYGDLYRGTYCS-------QDVAIKVLKPERINSDMQKEFA 337
D WE+ + + ++ GS+G +Y G VAIK + E + + EF
Sbjct: 11 DEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVN-EAASMRERIEFL 69
Query: 338 QEVFIMRKVRHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKG------VFKLPS 391
E +M++ +VV+ +G ++ ++ E M+ G + YL L+ V PS
Sbjct: 70 NEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPS 129
Query: 392 L---LKVAIDVSKGMNYLHQNNIIHRDLKAANLLMDENEVVKVADFGVAR--------VK 440
L +++A +++ GM YL+ N +HRDL A N ++ E+ VK+ DFG+ R K
Sbjct: 130 LSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRK 189
Query: 441 AQSGVMTAETGTYRWMAPEVIEHKPYDHKADVFSFGIVLWELLT-GKLPYEYLT 493
G++ RWM+PE ++ + +DV+SFG+VLWE+ T + PY+ L+
Sbjct: 190 GGKGLLPV-----RWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLS 238
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 106 bits (264), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 63/201 (31%), Positives = 113/201 (56%), Gaps = 11/201 (5%)
Query: 299 KVASGSYGDLYRGTYCSQ----DVAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQF 354
++ G++G + +G Y + DVAIKVLK +D + E +E IM ++ + +V+
Sbjct: 17 ELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTE-EMMREAQIMHQLDNPYIVRL 75
Query: 355 IGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHR 414
IG C + +L +V E GG ++ +L + + ++ ++ VS GM YL + N +HR
Sbjct: 76 IGVC-QAEALMLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEKNFVHR 134
Query: 415 DLKAANLLMDENEVVKVADFGVAR-VKAQSGVMTAETGT---YRWMAPEVIEHKPYDHKA 470
DL A N+L+ K++DFG+++ + A TA + +W APE I + + ++
Sbjct: 135 DLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRKFSSRS 194
Query: 471 DVFSFGIVLWELLT-GKLPYE 490
DV+S+G+ +WE L+ G+ PY+
Sbjct: 195 DVWSYGVTMWEALSYGQKPYK 215
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 106 bits (264), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 69/234 (29%), Positives = 118/234 (50%), Gaps = 31/234 (13%)
Query: 285 DVWEIDPKHLKFGSKVASGSYGDLYRGTYCS-------QDVAIKVLKPERINSDMQKEFA 337
D WE+ + + ++ GS+G +Y G VAIK + E + + EF
Sbjct: 5 DEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVN-EAASMRERIEFL 63
Query: 338 QEVFIMRKVRHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKG------VFKLPS 391
E +M++ +VV+ +G ++ ++ E M+ G + YL L+ V PS
Sbjct: 64 NEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPS 123
Query: 392 L---LKVAIDVSKGMNYLHQNNIIHRDLKAANLLMDENEVVKVADFGVAR--------VK 440
L +++A +++ GM YL+ N +HRDL A N ++ E+ VK+ DFG+ R K
Sbjct: 124 LSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRK 183
Query: 441 AQSGVMTAETGTYRWMAPEVIEHKPYDHKADVFSFGIVLWELLT-GKLPYEYLT 493
G++ RWM+PE ++ + +DV+SFG+VLWE+ T + PY+ L+
Sbjct: 184 GGKGLLPV-----RWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLS 232
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 106 bits (264), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 70/221 (31%), Positives = 111/221 (50%), Gaps = 15/221 (6%)
Query: 296 FGSKVASGSYGDLYRGTYCSQD-----VAIKVLKPERINSDMQ-KEFAQEVFIMRKVRHK 349
F + G +G +Y GT D A+K L RI + +F E IM+ H
Sbjct: 32 FNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSL--NRITDIGEVSQFLTEGIIMKDFSHP 89
Query: 350 NVVQFIGACTKPP-SLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQ 408
NV+ +G C + S +V +M G + +++ + L+ + V+KGM +L
Sbjct: 90 NVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLAS 149
Query: 409 NNIIHRDLKAANLLMDENEVVKVADFGVAR--VKAQSGVMTAETGT---YRWMAPEVIEH 463
+HRDL A N ++DE VKVADFG+AR + + +TG +WMA E ++
Sbjct: 150 KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQT 209
Query: 464 KPYDHKADVFSFGIVLWELLT-GKLPYEYLTPLQAAVGVVQ 503
+ + K+DV+SFG++LWEL+T G PY + V ++Q
Sbjct: 210 QKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQ 250
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 106 bits (264), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 70/237 (29%), Positives = 116/237 (48%), Gaps = 35/237 (14%)
Query: 287 WEIDPKHLKFGSKVASGSYGDLYRGTYCSQD-------VAIKVLKPERINSDMQKEFAQE 339
WE +L+FG + +G++G + T VA+K+LK ++D ++ E
Sbjct: 26 WEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLK-STAHADEKEALMSE 84
Query: 340 VFIMRKV-RHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSL------ 392
+ IM + +H+N+V +GACT + ++TE+ G + ++L + PSL
Sbjct: 85 LKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEAMLGPSLAPGQDP 144
Query: 393 ----------------LKVAIDVSKGMNYLHQNNIIHRDLKAANLLMDENEVVKVADFGV 436
L + V++GM +L N IHRD+ A N+L+ V K+ DFG+
Sbjct: 145 EGLDKEDGRPLELRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGL 204
Query: 437 AR-VKAQSGVMTAETGTY--RWMAPEVIEHKPYDHKADVFSFGIVLWELLT-GKLPY 489
AR + S + +WMAPE I Y ++DV+S+GI+LWE+ + G PY
Sbjct: 205 ARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPY 261
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 106 bits (264), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 69/221 (31%), Positives = 112/221 (50%), Gaps = 21/221 (9%)
Query: 289 IDPKHLKFGSKVASGSYGDLYRGTYCSQD-----VAIKVLKPERINSDMQKEFAQEVFIM 343
ID L G + G +G + G +D VA+K +K + + +EF E M
Sbjct: 31 IDRNLLILGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACM 90
Query: 344 RKVRHKNVVQFIGACTKP-----PSLCIVTEFMSGGSVYDYL--HKLKGVFK---LPSLL 393
+ H NV++ +G C + P ++ FM G ++ YL +L+ K L +LL
Sbjct: 91 KDFSHPNVIRLLGVCIEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLL 150
Query: 394 KVAIDVSKGMNYLHQNNIIHRDLKAANLLMDENEVVKVADFGVARVKAQSGVMTAETGT- 452
K +D++ GM YL N +HRDL A N ++ ++ V VADFG+++ K SG +
Sbjct: 151 KFMVDIALGMEYLSNRNFLHRDLAARNCMLRDDMTVCVADFGLSK-KIYSGDYYRQGRIA 209
Query: 453 ---YRWMAPEVIEHKPYDHKADVFSFGIVLWELLT-GKLPY 489
+W+A E + + Y K+DV++FG+ +WE+ T G PY
Sbjct: 210 KMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGMTPY 250
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 105 bits (263), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 69/234 (29%), Positives = 118/234 (50%), Gaps = 31/234 (13%)
Query: 285 DVWEIDPKHLKFGSKVASGSYGDLYRGTYCS-------QDVAIKVLKPERINSDMQKEFA 337
D WE+ + + ++ GS+G +Y G VAIK + E + + EF
Sbjct: 9 DEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVN-EAASMRERIEFL 67
Query: 338 QEVFIMRKVRHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKG------VFKLPS 391
E +M++ +VV+ +G ++ ++ E M+ G + YL L+ V PS
Sbjct: 68 NEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPS 127
Query: 392 L---LKVAIDVSKGMNYLHQNNIIHRDLKAANLLMDENEVVKVADFGVAR--------VK 440
L +++A +++ GM YL+ N +HRDL A N ++ E+ VK+ DFG+ R K
Sbjct: 128 LSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRK 187
Query: 441 AQSGVMTAETGTYRWMAPEVIEHKPYDHKADVFSFGIVLWELLT-GKLPYEYLT 493
G++ RWM+PE ++ + +DV+SFG+VLWE+ T + PY+ L+
Sbjct: 188 GGKGLLPV-----RWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLS 236
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 105 bits (263), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 70/221 (31%), Positives = 111/221 (50%), Gaps = 15/221 (6%)
Query: 296 FGSKVASGSYGDLYRGTYCSQD-----VAIKVLKPERINSDMQ-KEFAQEVFIMRKVRHK 349
F + G +G +Y GT D A+K L RI + +F E IM+ H
Sbjct: 34 FNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSL--NRITDIGEVSQFLTEGIIMKDFSHP 91
Query: 350 NVVQFIGACTKPP-SLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQ 408
NV+ +G C + S +V +M G + +++ + L+ + V+KGM +L
Sbjct: 92 NVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLAS 151
Query: 409 NNIIHRDLKAANLLMDENEVVKVADFGVAR--VKAQSGVMTAETGT---YRWMAPEVIEH 463
+HRDL A N ++DE VKVADFG+AR + + +TG +WMA E ++
Sbjct: 152 KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQT 211
Query: 464 KPYDHKADVFSFGIVLWELLT-GKLPYEYLTPLQAAVGVVQ 503
+ + K+DV+SFG++LWEL+T G PY + V ++Q
Sbjct: 212 QKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQ 252
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 105 bits (263), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 66/204 (32%), Positives = 106/204 (51%), Gaps = 20/204 (9%)
Query: 318 VAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQFIGACTKPPSLCIVTEFMSGGSVY 377
VA+K LK + +++F +E ++ ++H+++V+F G CT+ L +V E+M G +
Sbjct: 51 VAVKALK--EASESARQDFQREAELLTMLQHQHIVRFFGVCTEGRPLLMVFEYMRHGDLN 108
Query: 378 DYLHK--------------LKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDLKAANLLM 423
+L G L LL VA V+ GM YL + +HRDL N L+
Sbjct: 109 RFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGLHFVHRDLATRNCLV 168
Query: 424 DENEVVKVADFGVARVKAQSGVMTAETGTY---RWMAPEVIEHKPYDHKADVFSFGIVLW 480
+ VVK+ DFG++R + T RWM PE I ++ + ++DV+SFG+VLW
Sbjct: 169 GQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLW 228
Query: 481 ELLT-GKLPYEYLTPLQAAVGVVQ 503
E+ T GK P+ L+ +A + Q
Sbjct: 229 EIFTYGKQPWYQLSNTEAIDCITQ 252
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 105 bits (263), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 70/221 (31%), Positives = 111/221 (50%), Gaps = 15/221 (6%)
Query: 296 FGSKVASGSYGDLYRGTYCSQD-----VAIKVLKPERINSDMQ-KEFAQEVFIMRKVRHK 349
F + G +G +Y GT D A+K L RI + +F E IM+ H
Sbjct: 39 FNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSL--NRITDIGEVSQFLTEGIIMKDFSHP 96
Query: 350 NVVQFIGACTKPP-SLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQ 408
NV+ +G C + S +V +M G + +++ + L+ + V+KGM +L
Sbjct: 97 NVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLAS 156
Query: 409 NNIIHRDLKAANLLMDENEVVKVADFGVAR--VKAQSGVMTAETGT---YRWMAPEVIEH 463
+HRDL A N ++DE VKVADFG+AR + + +TG +WMA E ++
Sbjct: 157 KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQT 216
Query: 464 KPYDHKADVFSFGIVLWELLT-GKLPYEYLTPLQAAVGVVQ 503
+ + K+DV+SFG++LWEL+T G PY + V ++Q
Sbjct: 217 QKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQ 257
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 105 bits (263), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 67/242 (27%), Positives = 121/242 (50%), Gaps = 35/242 (14%)
Query: 287 WEIDPKHLKFGSKVASGSYGDL-------YRGTYCSQDVAIKVLKPERINSDMQKEFAQE 339
WE K+L G + G +G + +G VA+K+LK S++ ++ E
Sbjct: 18 WEFPRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSEL-RDLLSE 76
Query: 340 VFIMRKVRHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGV------------- 386
++++V H +V++ GAC++ L ++ E+ GS+ +L + + V
Sbjct: 77 FNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNS 136
Query: 387 ----------FKLPSLLKVAIDVSKGMNYLHQNNIIHRDLKAANLLMDENEVVKVADFGV 436
+ L+ A +S+GM YL + +++HRDL A N+L+ E +K++DFG+
Sbjct: 137 SSLDHPDERALTMGDLISFAWQISQGMQYLAEMSLVHRDLAARNILVAEGRKMKISDFGL 196
Query: 437 AR-VKAQSGVMTAETGTY--RWMAPEVIEHKPYDHKADVFSFGIVLWELLT-GKLPYEYL 492
+R V + + G +WMA E + Y ++DV+SFG++LWE++T G PY +
Sbjct: 197 SRDVYEEDSXVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGI 256
Query: 493 TP 494
P
Sbjct: 257 PP 258
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 105 bits (263), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 70/221 (31%), Positives = 111/221 (50%), Gaps = 15/221 (6%)
Query: 296 FGSKVASGSYGDLYRGTYCSQD-----VAIKVLKPERINSDMQ-KEFAQEVFIMRKVRHK 349
F + G +G +Y GT D A+K L RI + +F E IM+ H
Sbjct: 35 FNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSL--NRITDIGEVSQFLTEGIIMKDFSHP 92
Query: 350 NVVQFIGACTKPP-SLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQ 408
NV+ +G C + S +V +M G + +++ + L+ + V+KGM +L
Sbjct: 93 NVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLAS 152
Query: 409 NNIIHRDLKAANLLMDENEVVKVADFGVAR--VKAQSGVMTAETGT---YRWMAPEVIEH 463
+HRDL A N ++DE VKVADFG+AR + + +TG +WMA E ++
Sbjct: 153 KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQT 212
Query: 464 KPYDHKADVFSFGIVLWELLT-GKLPYEYLTPLQAAVGVVQ 503
+ + K+DV+SFG++LWEL+T G PY + V ++Q
Sbjct: 213 QKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQ 253
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 105 bits (263), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 66/204 (32%), Positives = 106/204 (51%), Gaps = 20/204 (9%)
Query: 318 VAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQFIGACTKPPSLCIVTEFMSGGSVY 377
VA+K LK + +++F +E ++ ++H+++V+F G CT+ L +V E+M G +
Sbjct: 45 VAVKALK--EASESARQDFQREAELLTMLQHQHIVRFFGVCTEGRPLLMVFEYMRHGDLN 102
Query: 378 DYLHK--------------LKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDLKAANLLM 423
+L G L LL VA V+ GM YL + +HRDL N L+
Sbjct: 103 RFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGLHFVHRDLATRNCLV 162
Query: 424 DENEVVKVADFGVARVKAQSGVMTAETGTY---RWMAPEVIEHKPYDHKADVFSFGIVLW 480
+ VVK+ DFG++R + T RWM PE I ++ + ++DV+SFG+VLW
Sbjct: 163 GQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLW 222
Query: 481 ELLT-GKLPYEYLTPLQAAVGVVQ 503
E+ T GK P+ L+ +A + Q
Sbjct: 223 EIFTYGKQPWYQLSNTEAIDCITQ 246
>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma
Kinase Catalytic Domain
pdb|4FNY|A Chain A, Crystal Structure Of The R1275q Anaplastic Lymphoma Kinase
Catalytic Domain In Complex With A Benzoxazole Inhibitor
Length = 327
Score = 105 bits (263), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 67/226 (29%), Positives = 111/226 (49%), Gaps = 21/226 (9%)
Query: 284 TDVWEIDPKHLKFGSKVASGSYGDLYRGTYCSQ-------DVAIKVLKPERINSDMQKEF 336
+D+ E+ K++ + G++G++Y G VA+K L PE + + +F
Sbjct: 23 SDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTL-PEVCSEQDELDF 81
Query: 337 AQEVFIMRKVRHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPS----- 391
E I+ K H+N+V+ IG + I+ E M+GG + +L + + PS
Sbjct: 82 LMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAML 141
Query: 392 -LLKVAIDVSKGMNYLHQNNIIHRDLKAANLLM---DENEVVKVADFGVARVKAQSGVMT 447
LL VA D++ G YL +N+ IHRD+ A N L+ V K+ DFG+A+ ++
Sbjct: 142 DLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMAQDIYRASYYR 201
Query: 448 AETGTY---RWMAPEVIEHKPYDHKADVFSFGIVLWELLT-GKLPY 489
+WM PE + K D +SFG++LWE+ + G +PY
Sbjct: 202 KGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPY 247
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 105 bits (263), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 70/221 (31%), Positives = 111/221 (50%), Gaps = 15/221 (6%)
Query: 296 FGSKVASGSYGDLYRGTYCSQD-----VAIKVLKPERINSDMQ-KEFAQEVFIMRKVRHK 349
F + G +G +Y GT D A+K L RI + +F E IM+ H
Sbjct: 34 FNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSL--NRITDIGEVSQFLTEGIIMKDFSHP 91
Query: 350 NVVQFIGACTKPP-SLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQ 408
NV+ +G C + S +V +M G + +++ + L+ + V+KGM +L
Sbjct: 92 NVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLAS 151
Query: 409 NNIIHRDLKAANLLMDENEVVKVADFGVAR--VKAQSGVMTAETGT---YRWMAPEVIEH 463
+HRDL A N ++DE VKVADFG+AR + + +TG +WMA E ++
Sbjct: 152 KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQT 211
Query: 464 KPYDHKADVFSFGIVLWELLT-GKLPYEYLTPLQAAVGVVQ 503
+ + K+DV+SFG++LWEL+T G PY + V ++Q
Sbjct: 212 QKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQ 252
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 105 bits (263), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 69/234 (29%), Positives = 118/234 (50%), Gaps = 31/234 (13%)
Query: 285 DVWEIDPKHLKFGSKVASGSYGDLYRGTYCS-------QDVAIKVLKPERINSDMQKEFA 337
D WE+ + + ++ GS+G +Y G VAIK + E + + EF
Sbjct: 12 DEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVN-EAASMRERIEFL 70
Query: 338 QEVFIMRKVRHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKG------VFKLPS 391
E +M++ +VV+ +G ++ ++ E M+ G + YL L+ V PS
Sbjct: 71 NEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPS 130
Query: 392 L---LKVAIDVSKGMNYLHQNNIIHRDLKAANLLMDENEVVKVADFGVAR--------VK 440
L +++A +++ GM YL+ N +HRDL A N ++ E+ VK+ DFG+ R K
Sbjct: 131 LSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRK 190
Query: 441 AQSGVMTAETGTYRWMAPEVIEHKPYDHKADVFSFGIVLWELLT-GKLPYEYLT 493
G++ RWM+PE ++ + +DV+SFG+VLWE+ T + PY+ L+
Sbjct: 191 GGKGLLPV-----RWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLS 239
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 105 bits (263), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 70/221 (31%), Positives = 111/221 (50%), Gaps = 15/221 (6%)
Query: 296 FGSKVASGSYGDLYRGTYCSQD-----VAIKVLKPERINSDMQ-KEFAQEVFIMRKVRHK 349
F + G +G +Y GT D A+K L RI + +F E IM+ H
Sbjct: 93 FNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSL--NRITDIGEVSQFLTEGIIMKDFSHP 150
Query: 350 NVVQFIGACTKPP-SLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQ 408
NV+ +G C + S +V +M G + +++ + L+ + V+KGM +L
Sbjct: 151 NVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLAS 210
Query: 409 NNIIHRDLKAANLLMDENEVVKVADFGVAR--VKAQSGVMTAETGT---YRWMAPEVIEH 463
+HRDL A N ++DE VKVADFG+AR + + +TG +WMA E ++
Sbjct: 211 KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQT 270
Query: 464 KPYDHKADVFSFGIVLWELLT-GKLPYEYLTPLQAAVGVVQ 503
+ + K+DV+SFG++LWEL+T G PY + V ++Q
Sbjct: 271 QKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQ 311
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 105 bits (263), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 69/234 (29%), Positives = 118/234 (50%), Gaps = 31/234 (13%)
Query: 285 DVWEIDPKHLKFGSKVASGSYGDLYRGTYCS-------QDVAIKVLKPERINSDMQKEFA 337
D WE+ + + ++ GS+G +Y G VAIK + E + + EF
Sbjct: 11 DEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVN-EAASMRERIEFL 69
Query: 338 QEVFIMRKVRHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKG------VFKLPS 391
E +M++ +VV+ +G ++ ++ E M+ G + YL L+ V PS
Sbjct: 70 NEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPS 129
Query: 392 L---LKVAIDVSKGMNYLHQNNIIHRDLKAANLLMDENEVVKVADFGVAR--------VK 440
L +++A +++ GM YL+ N +HRDL A N ++ E+ VK+ DFG+ R K
Sbjct: 130 LSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRK 189
Query: 441 AQSGVMTAETGTYRWMAPEVIEHKPYDHKADVFSFGIVLWELLT-GKLPYEYLT 493
G++ RWM+PE ++ + +DV+SFG+VLWE+ T + PY+ L+
Sbjct: 190 GGKGLLPV-----RWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLS 238
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 105 bits (263), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 69/234 (29%), Positives = 118/234 (50%), Gaps = 31/234 (13%)
Query: 285 DVWEIDPKHLKFGSKVASGSYGDLYRGTYCS-------QDVAIKVLKPERINSDMQKEFA 337
D WE+ + + ++ GS+G +Y G VAIK + E + + EF
Sbjct: 8 DEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVN-EAASMRERIEFL 66
Query: 338 QEVFIMRKVRHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKG------VFKLPS 391
E +M++ +VV+ +G ++ ++ E M+ G + YL L+ V PS
Sbjct: 67 NEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPS 126
Query: 392 L---LKVAIDVSKGMNYLHQNNIIHRDLKAANLLMDENEVVKVADFGVAR--------VK 440
L +++A +++ GM YL+ N +HRDL A N ++ E+ VK+ DFG+ R K
Sbjct: 127 LSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRK 186
Query: 441 AQSGVMTAETGTYRWMAPEVIEHKPYDHKADVFSFGIVLWELLT-GKLPYEYLT 493
G++ RWM+PE ++ + +DV+SFG+VLWE+ T + PY+ L+
Sbjct: 187 GGKGLLPV-----RWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLS 235
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 105 bits (263), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 70/240 (29%), Positives = 119/240 (49%), Gaps = 14/240 (5%)
Query: 271 KSHPY-HLKIPNDGTDVWEIDPKHLKFGSKVASGSYGDLYRGTYCSQDVAIKVLKPERIN 329
KS Y H++ D +VWEI ++ G++G +Y+ E +
Sbjct: 4 KSREYEHVRRDLDPNEVWEI-------VGELGDGAFGKVYKAKNKETGALAAAKVIETKS 56
Query: 330 SDMQKEFAQEVFIMRKVRHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKL 389
+ +++ E+ I+ H +V+ +GA L I+ EF GG+V + +L
Sbjct: 57 EEELEDYIVEIEILATCDHPYIVKLLGAYYHDGKLWIMIEFCPGGAVDAIMLELDRGLTE 116
Query: 390 PSLLKVAIDVSKGMNYLHQNNIIHRDLKAANLLMDENEVVKVADFGVARVKAQS-GVMTA 448
P + V + + +N+LH IIHRDLKA N+LM +++ADFGV+ ++ +
Sbjct: 117 PQIQVVCRQMLEALNFLHSKRIIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQKRDS 176
Query: 449 ETGTYRWMAPEVI-----EHKPYDHKADVFSFGIVLWELLTGKLPYEYLTPLQAAVGVVQ 503
GT WMAPEV+ + PYD+KAD++S GI L E+ + P+ L P++ + + +
Sbjct: 177 FIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLLKIAK 236
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 105 bits (262), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 68/249 (27%), Positives = 121/249 (48%), Gaps = 28/249 (11%)
Query: 281 NDGTDVWEIDPKHLKFGSKVASGSYGDLYRG-------TYCSQDVAIKVLKPERINSDMQ 333
+ G V I + + ++ G++G ++ T VA+K LK + + +
Sbjct: 4 HSGIHVQHIKRRDIVLKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAA--R 61
Query: 334 KEFAQEVFIMRKVRHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLH------------ 381
K+F +E ++ ++H+++V+F G C L +V E+M G + +L
Sbjct: 62 KDFQREAELLTNLQHEHIVKFYGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDG 121
Query: 382 ---KLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDLKAANLLMDENEVVKVADFGVAR 438
+ KG L +L +A ++ GM YL + +HRDL N L+ N +VK+ DFG++R
Sbjct: 122 QPRQAKGELGLSQMLHIASQIASGMVYLASQHFVHRDLATRNCLVGANLLVKIGDFGMSR 181
Query: 439 VKAQSGVMTAETGTY---RWMAPEVIEHKPYDHKADVFSFGIVLWELLT-GKLPYEYLTP 494
+ T RWM PE I ++ + ++DV+SFG++LWE+ T GK P+ L+
Sbjct: 182 DVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVILWEIFTYGKQPWFQLSN 241
Query: 495 LQAAVGVVQ 503
+ + Q
Sbjct: 242 TEVIECITQ 250
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 105 bits (262), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 69/234 (29%), Positives = 118/234 (50%), Gaps = 31/234 (13%)
Query: 285 DVWEIDPKHLKFGSKVASGSYGDLYRGTYCS-------QDVAIKVLKPERINSDMQKEFA 337
D WE+ + + ++ GS+G +Y G VAIK + E + + EF
Sbjct: 40 DEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVN-EAASMRERIEFL 98
Query: 338 QEVFIMRKVRHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKG------VFKLPS 391
E +M++ +VV+ +G ++ ++ E M+ G + YL L+ V PS
Sbjct: 99 NEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPS 158
Query: 392 L---LKVAIDVSKGMNYLHQNNIIHRDLKAANLLMDENEVVKVADFGVAR--------VK 440
L +++A +++ GM YL+ N +HRDL A N ++ E+ VK+ DFG+ R K
Sbjct: 159 LSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRK 218
Query: 441 AQSGVMTAETGTYRWMAPEVIEHKPYDHKADVFSFGIVLWELLT-GKLPYEYLT 493
G++ RWM+PE ++ + +DV+SFG+VLWE+ T + PY+ L+
Sbjct: 219 GGKGLLPV-----RWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLS 267
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 105 bits (262), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 69/230 (30%), Positives = 115/230 (50%), Gaps = 28/230 (12%)
Query: 287 WEIDPKHLKFGSKVASGSYGDLYRGTYCSQ-------DVAIKVLKPERINSDMQKEFAQE 339
WE +L+FG + +G++G + T VA+K+LK ++D ++ E
Sbjct: 41 WEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLK-STAHADEKEALMSE 99
Query: 340 VFIMRKV-RHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYL---------------HKL 383
+ IM + +H+N+V +GACT + ++TE+ G + ++L H
Sbjct: 100 LKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKRPPGLEYSYNPSHNP 159
Query: 384 KGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDLKAANLLMDENEVVKVADFGVAR-VKAQ 442
+ LL + V++GM +L N IHRD+ A N+L+ V K+ DFG+AR +
Sbjct: 160 EEQLSSRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMND 219
Query: 443 SGVMTAETGTY--RWMAPEVIEHKPYDHKADVFSFGIVLWELLT-GKLPY 489
S + +WMAPE I Y ++DV+S+GI+LWE+ + G PY
Sbjct: 220 SNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPY 269
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 105 bits (262), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 71/240 (29%), Positives = 127/240 (52%), Gaps = 24/240 (10%)
Query: 260 SPTSEPEDTGMKSHPYHLKIPNDGTDVWEIDPKHLKFGSKVASGSYGDLYRGTYCSQ--- 316
SP S+PE+ K L + D + +I+ + G++G + +G Y +
Sbjct: 317 SPFSDPEELKDKK----LFLKRDNLLIADIE---------LGCGNFGSVRQGVYRMRKKQ 363
Query: 317 -DVAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQFIGACTKPPSLCIVTEFMSGGS 375
DVAIKVLK +D + E +E IM ++ + +V+ IG C + +L +V E GG
Sbjct: 364 IDVAIKVLKQGTEKADTE-EMMREAQIMHQLDNPYIVRLIGVC-QAEALMLVMEMAGGGP 421
Query: 376 VYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDLKAANLLMDENEVVKVADFG 435
++ +L + + ++ ++ VS GM YL + N +HR+L A N+L+ K++DFG
Sbjct: 422 LHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEKNFVHRNLAARNVLLVNRHYAKISDFG 481
Query: 436 VAR-VKAQSGVMTAETG---TYRWMAPEVIEHKPYDHKADVFSFGIVLWELLT-GKLPYE 490
+++ + A TA + +W APE I + + ++DV+S+G+ +WE L+ G+ PY+
Sbjct: 482 LSKALGADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYK 541
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 105 bits (262), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 67/242 (27%), Positives = 120/242 (49%), Gaps = 35/242 (14%)
Query: 287 WEIDPKHLKFGSKVASGSYGDL-------YRGTYCSQDVAIKVLKPERINSDMQKEFAQE 339
WE K+L G + G +G + +G VA+K+LK S++ ++ E
Sbjct: 18 WEFPRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSEL-RDLLSE 76
Query: 340 VFIMRKVRHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGV------------- 386
++++V H +V++ GAC++ L ++ E+ GS+ +L + + V
Sbjct: 77 FNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNS 136
Query: 387 ----------FKLPSLLKVAIDVSKGMNYLHQNNIIHRDLKAANLLMDENEVVKVADFGV 436
+ L+ A +S+GM YL + ++HRDL A N+L+ E +K++DFG+
Sbjct: 137 SSLDHPDERALTMGDLISFAWQISQGMQYLAEMKLVHRDLAARNILVAEGRKMKISDFGL 196
Query: 437 AR-VKAQSGVMTAETGTY--RWMAPEVIEHKPYDHKADVFSFGIVLWELLT-GKLPYEYL 492
+R V + + G +WMA E + Y ++DV+SFG++LWE++T G PY +
Sbjct: 197 SRDVYEEDSXVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGI 256
Query: 493 TP 494
P
Sbjct: 257 PP 258
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 105 bits (262), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 64/212 (30%), Positives = 108/212 (50%), Gaps = 14/212 (6%)
Query: 285 DVWEIDPKHLKFGSKVASGSYGDLYRGTY------CSQDVAIKVLKPERINSDMQKEFAQ 338
D + + +HLKF ++ G++G + Y + VA+K L + + ++F +
Sbjct: 4 DPTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKL--QHSTEEHLRDFER 61
Query: 339 EVFIMRKVRHKNVVQFIGACTKPP--SLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVA 396
E+ I++ ++H N+V++ G C +L ++ E++ GS+ DYL K K LL+
Sbjct: 62 EIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYT 121
Query: 397 IDVSKGMNYLHQNNIIHRDLKAANLLMDENEVVKVADFGVARVKAQS----GVMTAETGT 452
+ KGM YL IHR+L N+L++ VK+ DFG+ +V Q V
Sbjct: 122 SQICKGMEYLGTKRYIHRNLATRNILVENENRVKIGDFGLTKVLPQDKEYYKVKEPGESP 181
Query: 453 YRWMAPEVIEHKPYDHKADVFSFGIVLWELLT 484
W APE + + +DV+SFG+VL+EL T
Sbjct: 182 IFWYAPESLTESKFSVASDVWSFGVVLYELFT 213
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 105 bits (262), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 63/203 (31%), Positives = 112/203 (55%), Gaps = 12/203 (5%)
Query: 300 VASGSYGDLYRGTYCSQD------VAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQ 353
+ SG +G +++G + + V IKV++ + Q + + + H ++V+
Sbjct: 39 LGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQA-VTDHMLAIGSLDHAHIVR 97
Query: 354 FIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIH 413
+G C SL +VT+++ GS+ D++ + +G LL + ++KGM YL ++ ++H
Sbjct: 98 LLGLCPGS-SLQLVTQYLPLGSLLDHVRQHRGALGPQLLLNWGVQIAKGMYYLEEHGMVH 156
Query: 414 RDLKAANLLMDENEVVKVADFGVARVKA--QSGVMTAETGT-YRWMAPEVIEHKPYDHKA 470
R+L A N+L+ V+VADFGVA + ++ +E T +WMA E I Y H++
Sbjct: 157 RNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTPIKWMALESIHFGKYTHQS 216
Query: 471 DVFSFGIVLWELLT-GKLPYEYL 492
DV+S+G+ +WEL+T G PY L
Sbjct: 217 DVWSYGVTVWELMTFGAEPYAGL 239
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 105 bits (262), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 67/242 (27%), Positives = 120/242 (49%), Gaps = 35/242 (14%)
Query: 287 WEIDPKHLKFGSKVASGSYGDL-------YRGTYCSQDVAIKVLKPERINSDMQKEFAQE 339
WE K+L G + G +G + +G VA+K+LK S++ ++ E
Sbjct: 18 WEFPRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSEL-RDLLSE 76
Query: 340 VFIMRKVRHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGV------------- 386
++++V H +V++ GAC++ L ++ E+ GS+ +L + + V
Sbjct: 77 FNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNS 136
Query: 387 ----------FKLPSLLKVAIDVSKGMNYLHQNNIIHRDLKAANLLMDENEVVKVADFGV 436
+ L+ A +S+GM YL + ++HRDL A N+L+ E +K++DFG+
Sbjct: 137 SSLDHPDERALTMGDLISFAWQISQGMQYLAEMKLVHRDLAARNILVAEGRKMKISDFGL 196
Query: 437 AR-VKAQSGVMTAETGTY--RWMAPEVIEHKPYDHKADVFSFGIVLWELLT-GKLPYEYL 492
+R V + + G +WMA E + Y ++DV+SFG++LWE++T G PY +
Sbjct: 197 SRDVYEEDSYVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGI 256
Query: 493 TP 494
P
Sbjct: 257 PP 258
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 105 bits (261), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 64/214 (29%), Positives = 115/214 (53%), Gaps = 12/214 (5%)
Query: 290 DPK--HLKFGSKVASGSYGDLYRG--TYCSQDVAIKVLKPERINSDMQKEFA-QEVFIMR 344
DPK + +F K+ G+ G +Y Q+VAI+ + + +KE E+ +MR
Sbjct: 18 DPKKKYTRF-EKIGQGASGTVYTAMDVATGQEVAIRQMN---LQQQPKKELIINEILVMR 73
Query: 345 KVRHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMN 404
+ ++ N+V ++ + L +V E+++GGS+ D + + + V + + +
Sbjct: 74 ENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTET--CMDEGQIAAVCRECLQALE 131
Query: 405 YLHQNNIIHRDLKAANLLMDENEVVKVADFG-VARVKAQSGVMTAETGTYRWMAPEVIEH 463
+LH N +IHR++K+ N+L+ + VK+ DFG A++ + + GT WMAPEV+
Sbjct: 132 FLHSNQVIHRNIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTR 191
Query: 464 KPYDHKADVFSFGIVLWELLTGKLPYEYLTPLQA 497
K Y K D++S GI+ E++ G+ PY PL+A
Sbjct: 192 KAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRA 225
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 105 bits (261), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 63/203 (31%), Positives = 112/203 (55%), Gaps = 12/203 (5%)
Query: 300 VASGSYGDLYRGTYCSQD------VAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQ 353
+ SG +G +++G + + V IKV++ + Q + + + H ++V+
Sbjct: 21 LGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQA-VTDHMLAIGSLDHAHIVR 79
Query: 354 FIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIH 413
+G C SL +VT+++ GS+ D++ + +G LL + ++KGM YL ++ ++H
Sbjct: 80 LLGLCPGS-SLQLVTQYLPLGSLLDHVRQHRGALGPQLLLNWGVQIAKGMYYLEEHGMVH 138
Query: 414 RDLKAANLLMDENEVVKVADFGVARVKA--QSGVMTAETGT-YRWMAPEVIEHKPYDHKA 470
R+L A N+L+ V+VADFGVA + ++ +E T +WMA E I Y H++
Sbjct: 139 RNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTPIKWMALESIHFGKYTHQS 198
Query: 471 DVFSFGIVLWELLT-GKLPYEYL 492
DV+S+G+ +WEL+T G PY L
Sbjct: 199 DVWSYGVTVWELMTFGAEPYAGL 221
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 105 bits (261), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 65/200 (32%), Positives = 105/200 (52%), Gaps = 10/200 (5%)
Query: 300 VASGSYGDLYRGTYCSQD-VAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQFIGAC 358
+ G +G +Y+G VA+K LK ER + +F EV ++ H+N+++ G C
Sbjct: 46 LGRGGFGKVYKGRLADGTLVAVKRLKEERXQGG-ELQFQTEVEMISMAVHRNLLRLRGFC 104
Query: 359 TKPPSLCIVTEFMSGGSVYDYLHKL---KGVFKLPSLLKVAIDVSKGMNYLHQN---NII 412
P +V +M+ GSV L + + P ++A+ ++G+ YLH + II
Sbjct: 105 MTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGSARGLAYLHDHCDPKII 164
Query: 413 HRDLKAANLLMDENEVVKVADFGVARVK--AQSGVMTAETGTYRWMAPEVIEHKPYDHKA 470
HRD+KAAN+L+DE V DFG+A++ V A GT +APE + K
Sbjct: 165 HRDVKAANILLDEEFEAVVGDFGLAKLMDYKDXHVXXAVRGTIGHIAPEYLSTGKSSEKT 224
Query: 471 DVFSFGIVLWELLTGKLPYE 490
DVF +G++L EL+TG+ ++
Sbjct: 225 DVFGYGVMLLELITGQRAFD 244
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 104 bits (260), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 69/234 (29%), Positives = 117/234 (50%), Gaps = 31/234 (13%)
Query: 285 DVWEIDPKHLKFGSKVASGSYGDLYRGTYCS-------QDVAIKVLKPERINSDMQKEFA 337
D WE+ + + ++ GS+G +Y G VAIK + E + + EF
Sbjct: 5 DEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVN-EAASMRERIEFL 63
Query: 338 QEVFIMRKVRHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKG------VFKLPS 391
E +M++ +VV+ +G ++ ++ E M+ G + YL L+ V PS
Sbjct: 64 NEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPS 123
Query: 392 L---LKVAIDVSKGMNYLHQNNIIHRDLKAANLLMDENEVVKVADFGVAR--------VK 440
L +++A +++ GM YL+ N +HRDL A N + E+ VK+ DFG+ R K
Sbjct: 124 LSKMIQMAGEIADGMAYLNANKFVHRDLAARNCXVAEDFTVKIGDFGMTRDIYETDYYRK 183
Query: 441 AQSGVMTAETGTYRWMAPEVIEHKPYDHKADVFSFGIVLWELLT-GKLPYEYLT 493
G++ RWM+PE ++ + +DV+SFG+VLWE+ T + PY+ L+
Sbjct: 184 GGKGLLPV-----RWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLS 232
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 67/207 (32%), Positives = 110/207 (53%), Gaps = 19/207 (9%)
Query: 292 KHLKFGSKVASGSYGDLYRGTYC--------SQDVAIKVLKPERINSDMQKEFAQEVFIM 343
++LK + G +G + YC + VA+K LK + + + QE+ I+
Sbjct: 31 RYLKKIRDLGEGHFGKV--SLYCYDPTNDGTGEMVAVKALKAD-AGPQHRSGWKQEIDIL 87
Query: 344 RKVRHKNVVQFIGAC--TKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSK 401
R + H++++++ G C SL +V E++ GS+ DYL + L LL A + +
Sbjct: 88 RTLYHEHIIKYKGCCEDAGAASLQLVMEYVPLGSLRDYLPRHS--IGLAQLLLFAQQICE 145
Query: 402 GMNYLHQNNIIHRDLKAANLLMDENEVVKVADFGVARV--KAQSGVMTAETG--TYRWMA 457
GM YLH + IHRDL A N+L+D + +VK+ DFG+A+ + E G W A
Sbjct: 146 GMAYLHAQHYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGHEXYRVREDGDSPVFWYA 205
Query: 458 PEVIEHKPYDHKADVFSFGIVLWELLT 484
PE ++ + + +DV+SFG+ L+ELLT
Sbjct: 206 PECLKEYKFYYASDVWSFGVTLYELLT 232
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 114/202 (56%), Gaps = 5/202 (2%)
Query: 293 HLKFGSKVASGSYGDLYRGTY--CSQDVAIKVLKPERINS-DMQKEFAQEVFIMRKVRHK 349
H G + G++G + G + VA+K+L ++I S D+ + +E+ ++ RH
Sbjct: 12 HYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHP 71
Query: 350 NVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQN 409
++++ + P +V E++SGG ++DY+ K V ++ + ++ + ++Y H++
Sbjct: 72 HIIKLYQVISTPTDFFMVMEYVSGGELFDYICKHGRVEEMEAR-RLFQQILSAVDYCHRH 130
Query: 410 NIIHRDLKAANLLMDENEVVKVADFGVARVKAQSGVMTAETGTYRWMAPEVIEHKPYDH- 468
++HRDLK N+L+D + K+ADFG++ + + + G+ + APEVI + Y
Sbjct: 131 MVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRTSCGSPNYAAPEVISGRLYAGP 190
Query: 469 KADVFSFGIVLWELLTGKLPYE 490
+ D++S G++L+ LL G LP++
Sbjct: 191 EVDIWSCGVILYALLCGTLPFD 212
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 67/234 (28%), Positives = 116/234 (49%), Gaps = 13/234 (5%)
Query: 276 HLKIPNDGTDVWEIDPKHLKFGSKVASGSYGDLYRGTYCSQDVAIKVLKPERINSDMQKE 335
H++ D +VWEI ++ G++G +Y+ E + + ++
Sbjct: 2 HVRRDLDPNEVWEI-------VGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELED 54
Query: 336 FAQEVFIMRKVRHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKV 395
+ E+ I+ H +V+ +GA L I+ EF GG+V + +L P + V
Sbjct: 55 YIVEIEILATCDHPYIVKLLGAYYHDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQVV 114
Query: 396 AIDVSKGMNYLHQNNIIHRDLKAANLLMDENEVVKVADFGVARVKAQS-GVMTAETGTYR 454
+ + +N+LH IIHRDLKA N+LM +++ADFGV+ ++ + GT
Sbjct: 115 CRQMLEALNFLHSKRIIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQKRDSFIGTPY 174
Query: 455 WMAPEVI-----EHKPYDHKADVFSFGIVLWELLTGKLPYEYLTPLQAAVGVVQ 503
WMAPEV+ + PYD+KAD++S GI L E+ + P+ L P++ + + +
Sbjct: 175 WMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLLKIAK 228
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 76/254 (29%), Positives = 133/254 (52%), Gaps = 27/254 (10%)
Query: 253 WPSHRSSSPTSEPEDTGMKSHPYHLKIPNDGTDVWEIDPKHLKFGSKV--------ASGS 304
W + + + P DT + PY D EI PK + K+ SG+
Sbjct: 331 WAADKGPQREALPMDTEVYESPY--------ADPEEIRPKEVYLDRKLLTLEDKELGSGN 382
Query: 305 YGDLYRGTY----CSQDVAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQFIGACTK 360
+G + +G Y + VA+K+LK E + ++ E E +M+++ + +V+ IG C +
Sbjct: 383 FGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGIC-E 441
Query: 361 PPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDLKAAN 420
S +V E G + YL + + V K +++++ VS GM YL ++N +HRDL A N
Sbjct: 442 AESWMLVMEMAELGPLNKYLQQNRHV-KDKNIIELVHQVSMGMKYLEESNFVHRDLAARN 500
Query: 421 LLMDENEVVKVADFGVAR-VKAQSGVMTAET-GTY--RWMAPEVIEHKPYDHKADVFSFG 476
+L+ K++DFG+++ ++A A+T G + +W APE I + + K+DV+SFG
Sbjct: 501 VLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFG 560
Query: 477 IVLWELLT-GKLPY 489
+++WE + G+ PY
Sbjct: 561 VLMWEAFSYGQKPY 574
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 65/205 (31%), Positives = 108/205 (52%), Gaps = 14/205 (6%)
Query: 292 KHLKFGSKVASGSYG--DLYR----GTYCSQDVAIKVLKPERINSDMQKEFAQEVFIMRK 345
+HLK+ S++ G++G +L R G VA+K L + D Q++F +E+ I++
Sbjct: 10 RHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQL--QHSGPDQQRDFQREIQILKA 67
Query: 346 VRHKNVVQFIGACTKP--PSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGM 403
+ +V++ G P SL +V E++ G + D+L + + LL + + KGM
Sbjct: 68 LHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGM 127
Query: 404 NYLHQNNIIHRDLKAANLLMDENEVVKVADFGVARV----KAQSGVMTAETGTYRWMAPE 459
YL +HRDL A N+L++ VK+ADFG+A++ K V W APE
Sbjct: 128 EYLGSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPE 187
Query: 460 VIEHKPYDHKADVFSFGIVLWELLT 484
+ + ++DV+SFG+VL+EL T
Sbjct: 188 SLSDNIFSRQSDVWSFGVVLYELFT 212
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 104 bits (259), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 78/235 (33%), Positives = 120/235 (51%), Gaps = 13/235 (5%)
Query: 277 LKIPNDGTDVWEIDPKHLKFGS--KVASGSYGDLY--RGTYCSQDVAIKVLKPERINSDM 332
LK P+ ++ DP+ L F ++ GS+G +Y R S+ VAIK + S+
Sbjct: 38 LKDPDVAELFFKDDPEKL-FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNE 96
Query: 333 Q-KEFAQEVFIMRKVRHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPS 391
+ ++ +EV ++K+RH N +Q+ G + + +V E+ G S D L K +
Sbjct: 97 KWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVMEYCLG-SASDLLEVHKKPLQEVE 155
Query: 392 LLKVAIDVSKGMNYLHQNNIIHRDLKAANLLMDENEVVKVADFGVARVKAQSGVMTAETG 451
+ V +G+ YLH +N+IHRD+KA N+L+ E +VK+ DFG A + A + G
Sbjct: 156 IAAVTHGALQGLAYLHSHNMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPANXF---VG 212
Query: 452 TYRWMAPEVI---EHKPYDHKADVFSFGIVLWELLTGKLPYEYLTPLQAAVGVVQ 503
T WMAPEVI + YD K DV+S GI EL K P + + A + Q
Sbjct: 213 TPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQ 267
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 104 bits (259), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 69/217 (31%), Positives = 112/217 (51%), Gaps = 17/217 (7%)
Query: 280 PNDGTDVWEIDPKHLKFGSKVASGSYG--DLYR----GTYCSQDVAIKVLKPERINSDMQ 333
P D T E +HLK+ S++ G++G +L R G VA+K L + D Q
Sbjct: 2 PQDPTIFEE---RHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQL--QHSGPDQQ 56
Query: 334 KEFAQEVFIMRKVRHKNVVQFIGACTKP--PSLCIVTEFMSGGSVYDYLHKLKGVFKLPS 391
++F +E+ I++ + +V++ G P SL +V E++ G + D+L + +
Sbjct: 57 RDFQREIQILKALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASR 116
Query: 392 LLKVAIDVSKGMNYLHQNNIIHRDLKAANLLMDENEVVKVADFGVARV----KAQSGVMT 447
LL + + KGM YL +HRDL A N+L++ VK+ADFG+A++ K V
Sbjct: 117 LLLYSSQICKGMEYLGSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVRE 176
Query: 448 AETGTYRWMAPEVIEHKPYDHKADVFSFGIVLWELLT 484
W APE + + ++DV+SFG+VL+EL T
Sbjct: 177 PGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFT 213
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 104 bits (259), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 60/195 (30%), Positives = 105/195 (53%), Gaps = 7/195 (3%)
Query: 300 VASGSYGDLYRGT--YCSQDVAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQFIGA 357
+ GS+G++ + Q+ A+KV+ + +EV +++K+ H N+++
Sbjct: 30 LGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEI 89
Query: 358 CTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDLK 417
S IV E +GG ++D + K K F ++ V G+ Y+H++NI+HRDLK
Sbjct: 90 LEDSSSFYIVGELYTGGELFDEIIKRKR-FSEHDAARIIKQVFSGITYMHKHNIVHRDLK 148
Query: 418 AANLLMDENEV---VKVADFGVARVKAQSGVMTAETGTYRWMAPEVIEHKPYDHKADVFS 474
N+L++ E +K+ DFG++ Q+ M GT ++APEV+ YD K DV+S
Sbjct: 149 PENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRIGTAYYIAPEVL-RGTYDEKCDVWS 207
Query: 475 FGIVLWELLTGKLPY 489
G++L+ LL+G P+
Sbjct: 208 AGVILYILLSGTPPF 222
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 104 bits (259), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 65/205 (31%), Positives = 108/205 (52%), Gaps = 14/205 (6%)
Query: 292 KHLKFGSKVASGSYG--DLYR----GTYCSQDVAIKVLKPERINSDMQKEFAQEVFIMRK 345
+HLK+ S++ G++G +L R G VA+K L + D Q++F +E+ I++
Sbjct: 23 RHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQL--QHSGPDQQRDFQREIQILKA 80
Query: 346 VRHKNVVQFIGACTKP--PSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGM 403
+ +V++ G P SL +V E++ G + D+L + + LL + + KGM
Sbjct: 81 LHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGM 140
Query: 404 NYLHQNNIIHRDLKAANLLMDENEVVKVADFGVARV----KAQSGVMTAETGTYRWMAPE 459
YL +HRDL A N+L++ VK+ADFG+A++ K V W APE
Sbjct: 141 EYLGSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPE 200
Query: 460 VIEHKPYDHKADVFSFGIVLWELLT 484
+ + ++DV+SFG+VL+EL T
Sbjct: 201 SLSDNIFSRQSDVWSFGVVLYELFT 225
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 68/212 (32%), Positives = 110/212 (51%), Gaps = 8/212 (3%)
Query: 290 DPK-HLKFGSKVASGSYGDLYRGT--YCSQDVAIKVLKPERINSDMQKEFAQEVFIMRKV 346
DP+ +L K+ GS G + T + + VA+K K + ++ EV IMR
Sbjct: 42 DPREYLANFIKIGEGSTGIVCIATEKHTGKQVAVK--KMDLRKQQRRELLFNEVVIMRDY 99
Query: 347 RHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYL 406
H NVV + L +V EF+ GG++ D + + + V + V + ++YL
Sbjct: 100 HHDNVVDMYSSYLVGDELWVVMEFLEGGALTDIVTHTR--MNEEQIATVCLSVLRALSYL 157
Query: 407 HQNNIIHRDLKAANLLMDENEVVKVADFG-VARVKAQSGVMTAETGTYRWMAPEVIEHKP 465
H +IHRD+K+ ++L+ + +K++DFG A+V + GT WMAPEVI P
Sbjct: 158 HNQGVIHRDIKSDSILLTSDGRIKLSDFGFCAQVSKEVPKRKXLVGTPYWMAPEVISRLP 217
Query: 466 YDHKADVFSFGIVLWELLTGKLPYEYLTPLQA 497
Y + D++S GI++ E++ G+ PY PLQA
Sbjct: 218 YGTEVDIWSLGIMVIEMIDGEPPYFNEPPLQA 249
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 65/219 (29%), Positives = 112/219 (51%), Gaps = 6/219 (2%)
Query: 294 LKFGSKVASGSYGDLY--RGTYCSQDVAIKVL-KPERINSDMQKEFAQEVFIMRKVRHKN 350
+ G + G +G++Y R +A+KVL K + + ++ + +EV I +RH N
Sbjct: 36 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 95
Query: 351 VVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNN 410
+++ G + ++ E+ G+VY L KL F +++ ++Y H
Sbjct: 96 ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK-FDEQRTATYITELANALSYCHSKR 154
Query: 411 IIHRDLKAANLLMDENEVVKVADFGVARVKAQSGVMTAETGTYRWMAPEVIEHKPYDHKA 470
+IHRD+K NLL+ +K+ADFG + V A S T GT ++ PE+IE + +D K
Sbjct: 155 VIHRDIKPENLLLGSAGELKIADFGWS-VHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKV 213
Query: 471 DVFSFGIVLWELLTGKLPYEYLTPLQAAVGVVQKVHHSF 509
D++S G++ +E L GK P+E T Q + +V +F
Sbjct: 214 DLWSLGVLCYEFLVGKPPFEANT-YQETYKRISRVEFTF 251
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 114/202 (56%), Gaps = 5/202 (2%)
Query: 293 HLKFGSKVASGSYGDLYRGTY--CSQDVAIKVLKPERINS-DMQKEFAQEVFIMRKVRHK 349
H G + G++G + G + VA+K+L ++I S D+ + +E+ ++ RH
Sbjct: 12 HYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHP 71
Query: 350 NVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQN 409
++++ + P +V E++SGG ++DY+ K V ++ + ++ + ++Y H++
Sbjct: 72 HIIKLYQVISTPTDFFMVMEYVSGGELFDYICKHGRVEEMEAR-RLFQQILSAVDYCHRH 130
Query: 410 NIIHRDLKAANLLMDENEVVKVADFGVARVKAQSGVMTAETGTYRWMAPEVIEHKPYDH- 468
++HRDLK N+L+D + K+ADFG++ + + + G+ + APEVI + Y
Sbjct: 131 MVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRDSCGSPNYAAPEVISGRLYAGP 190
Query: 469 KADVFSFGIVLWELLTGKLPYE 490
+ D++S G++L+ LL G LP++
Sbjct: 191 EVDIWSCGVILYALLCGTLPFD 212
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 72/242 (29%), Positives = 120/242 (49%), Gaps = 9/242 (3%)
Query: 258 SSSPTSEPEDTGMKSHPYHLKIPNDGTDVWEIDPK-HLKFGSKVASGSYGDLYRGTYCSQ 316
SSP EP+ + L++ D D P+ +L K+ GS G + T S
Sbjct: 1 GSSPQREPQRVSHEQFRAALQLVVDPGD-----PRSYLDNFIKIGEGSTGIVCIATVRSS 55
Query: 317 DVAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQFIGACTKPPSLCIVTEFMSGGSV 376
+ V K + ++ EV IMR +H+NVV+ + L +V EF+ GG++
Sbjct: 56 GKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGAL 115
Query: 377 YDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDLKAANLLMDENEVVKVADFG- 435
D + + + V + V + ++ LH +IHRD+K+ ++L+ + VK++DFG
Sbjct: 116 TDIVTHTR--MNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGF 173
Query: 436 VARVKAQSGVMTAETGTYRWMAPEVIEHKPYDHKADVFSFGIVLWELLTGKLPYEYLTPL 495
A+V + GT WMAPE+I PY + D++S GI++ E++ G+ PY PL
Sbjct: 174 CAQVSKEVPRRKXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPL 233
Query: 496 QA 497
+A
Sbjct: 234 KA 235
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 103 bits (257), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 63/212 (29%), Positives = 106/212 (50%), Gaps = 14/212 (6%)
Query: 285 DVWEIDPKHLKFGSKVASGSYGDLYRGTY------CSQDVAIKVLKPERINSDMQKEFAQ 338
D + + +HLKF ++ G++G + Y + VA+K L + + ++F +
Sbjct: 6 DPTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKL--QHSTEEHLRDFER 63
Query: 339 EVFIMRKVRHKNVVQFIGACTKPP--SLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVA 396
E+ I++ ++H N+V++ G C +L ++ E++ GS+ DYL LL+
Sbjct: 64 EIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQAHAERIDHIKLLQYT 123
Query: 397 IDVSKGMNYLHQNNIIHRDLKAANLLMDENEVVKVADFGVARV----KAQSGVMTAETGT 452
+ KGM YL IHRDL N+L++ VK+ DFG+ +V K V
Sbjct: 124 SQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESP 183
Query: 453 YRWMAPEVIEHKPYDHKADVFSFGIVLWELLT 484
W APE + + +DV+SFG+VL+EL T
Sbjct: 184 IFWYAPESLTESKFSVASDVWSFGVVLYELFT 215
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 103 bits (257), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 71/211 (33%), Positives = 109/211 (51%), Gaps = 10/211 (4%)
Query: 299 KVASGSYGDLY--RGTYCSQDVAIKVLKPERINSDMQ-KEFAQEVFIMRKVRHKNVVQFI 355
++ GS+G +Y R S+ VAIK + S+ + ++ +EV ++K+RH N +Q+
Sbjct: 22 EIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYR 81
Query: 356 GACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRD 415
G + + +V E+ G S D L K + + V +G+ YLH +N+IHRD
Sbjct: 82 GCYLREHTAWLVMEYCLG-SASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSHNMIHRD 140
Query: 416 LKAANLLMDENEVVKVADFGVARVKAQSGVMTAETGTYRWMAPEVI---EHKPYDHKADV 472
+KA N+L+ E +VK+ DFG A + A + GT WMAPEVI + YD K DV
Sbjct: 141 VKAGNILLSEPGLVKLGDFGSASIMAPANXF---VGTPYWMAPEVILAMDEGQYDGKVDV 197
Query: 473 FSFGIVLWELLTGKLPYEYLTPLQAAVGVVQ 503
+S GI EL K P + + A + Q
Sbjct: 198 WSLGITCIELAERKPPLFNMNAMSALYHIAQ 228
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 103 bits (257), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 67/230 (29%), Positives = 117/230 (50%), Gaps = 8/230 (3%)
Query: 283 GTDVWEIDPKHLKFGSKVASGSYGDLY--RGTYCSQDVAIKVL-KPERINSDMQKEFAQE 339
G+ W ++ + G + G +G++Y R +A+KVL K + + ++ + +E
Sbjct: 4 GSRQWALE--DFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRRE 61
Query: 340 VFIMRKVRHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDV 399
V I +RH N+++ G + ++ E+ G+VY L KL F ++
Sbjct: 62 VEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK-FDEQRTATYITEL 120
Query: 400 SKGMNYLHQNNIIHRDLKAANLLMDENEVVKVADFGVARVKAQSGVMTAETGTYRWMAPE 459
+ ++Y H +IHRD+K NLL+ +K+ADFG + V A S A GT ++ PE
Sbjct: 121 ANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS-VHAPSSRRAALCGTLDYLPPE 179
Query: 460 VIEHKPYDHKADVFSFGIVLWELLTGKLPYEYLTPLQAAVGVVQKVHHSF 509
+IE + +D K D++S G++ +E L GK P+E T Q + +V +F
Sbjct: 180 MIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANT-YQETYKRISRVEFTF 228
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 103 bits (256), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 65/219 (29%), Positives = 112/219 (51%), Gaps = 6/219 (2%)
Query: 294 LKFGSKVASGSYGDLY--RGTYCSQDVAIKVL-KPERINSDMQKEFAQEVFIMRKVRHKN 350
+ G + G +G++Y R +A+KVL K + + ++ + +EV I +RH N
Sbjct: 27 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 86
Query: 351 VVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNN 410
+++ G + ++ E+ G+VY L KL F +++ ++Y H
Sbjct: 87 ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK-FDEQRTATYITELANALSYCHSKR 145
Query: 411 IIHRDLKAANLLMDENEVVKVADFGVARVKAQSGVMTAETGTYRWMAPEVIEHKPYDHKA 470
+IHRD+K NLL+ +K+ADFG + V A S T GT ++ PE+IE + +D K
Sbjct: 146 VIHRDIKPENLLLGSAGELKIADFGWS-VHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKV 204
Query: 471 DVFSFGIVLWELLTGKLPYEYLTPLQAAVGVVQKVHHSF 509
D++S G++ +E L GK P+E T Q + +V +F
Sbjct: 205 DLWSLGVLCYEFLVGKPPFEANT-YQETYKRISRVEFTF 242
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 103 bits (256), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 61/205 (29%), Positives = 112/205 (54%), Gaps = 13/205 (6%)
Query: 292 KHLKFGSKVASGSYGDLY--RGTYCSQDVAIKVLK--PERINSDMQKEFAQEVFIMRKVR 347
K F + SG++ +++ + + A+K +K P +S ++ E A +++K++
Sbjct: 9 KTFIFMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSSLENEIA----VLKKIK 64
Query: 348 HKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLH 407
H+N+V +V + +SGG ++D + + +GV+ V V + YLH
Sbjct: 65 HENIVTLEDIYESTTHYYLVMQLVSGGELFDRILE-RGVYTEKDASLVIQQVLSAVKYLH 123
Query: 408 QNNIIHRDLKAANLLM---DENEVVKVADFGVARVKAQSGVMTAETGTYRWMAPEVIEHK 464
+N I+HRDLK NLL +EN + + DFG+++++ Q+G+M+ GT ++APEV+ K
Sbjct: 124 ENGIVHRDLKPENLLYLTPEENSKIMITDFGLSKME-QNGIMSTACGTPGYVAPEVLAQK 182
Query: 465 PYDHKADVFSFGIVLWELLTGKLPY 489
PY D +S G++ + LL G P+
Sbjct: 183 PYSKAVDCWSIGVITYILLCGYPPF 207
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 103 bits (256), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 67/230 (29%), Positives = 116/230 (50%), Gaps = 8/230 (3%)
Query: 283 GTDVWEIDPKHLKFGSKVASGSYGDLY--RGTYCSQDVAIKVL-KPERINSDMQKEFAQE 339
G W ++ + G + G +G++Y R +A+KVL K + + ++ + +E
Sbjct: 1 GPRQWALE--DFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRRE 58
Query: 340 VFIMRKVRHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDV 399
V I +RH N+++ G + ++ E+ G+VY L KL F ++
Sbjct: 59 VEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK-FDEQRTATYITEL 117
Query: 400 SKGMNYLHQNNIIHRDLKAANLLMDENEVVKVADFGVARVKAQSGVMTAETGTYRWMAPE 459
+ ++Y H +IHRD+K NLL+ +K+ADFG + V A S T GT ++ PE
Sbjct: 118 ANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS-VHAPSSRRTTLCGTLDYLPPE 176
Query: 460 VIEHKPYDHKADVFSFGIVLWELLTGKLPYEYLTPLQAAVGVVQKVHHSF 509
+IE + +D K D++S G++ +E L GK P+E T Q + +V +F
Sbjct: 177 MIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANT-YQETYKRISRVEFTF 225
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 102 bits (255), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 107/203 (52%), Gaps = 7/203 (3%)
Query: 292 KHLKFGSKVASGSYGD--LYRGTYCSQDVAIKVLKPERINSDMQKEFAQEVFIMRKVRHK 349
K +F + +G++ + L + A+K + P++ + E+ ++RK++H+
Sbjct: 22 KIFEFKETLGTGAFSEVVLAEEKATGKLFAVKCI-PKKALKGKESSIENEIAVLRKIKHE 80
Query: 350 NVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQN 409
N+V P L +V + +SGG ++D + + KG + + V + YLH+
Sbjct: 81 NIVALEDIYESPNHLYLVMQLVSGGELFDRIVE-KGFYTEKDASTLIRQVLDAVYYLHRM 139
Query: 410 NIIHRDLKAANLL---MDENEVVKVADFGVARVKAQSGVMTAETGTYRWMAPEVIEHKPY 466
I+HRDLK NLL DE + ++DFG+++++ + VM+ GT ++APEV+ KPY
Sbjct: 140 GIVHRDLKPENLLYYSQDEESKIMISDFGLSKMEGKGDVMSTACGTPGYVAPEVLAQKPY 199
Query: 467 DHKADVFSFGIVLWELLTGKLPY 489
D +S G++ + LL G P+
Sbjct: 200 SKAVDCWSIGVIAYILLCGYPPF 222
>pdb|3KMU|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Apo)
Length = 271
Score = 102 bits (255), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 63/213 (29%), Positives = 111/213 (52%), Gaps = 12/213 (5%)
Query: 289 IDPKHLKFGSKVASGSYGDLYRGTYCSQDVAIKVLKPERINSDMQKEFAQEVFIMRKVRH 348
ID K L F +K+ G+L++G + D+ +KVLK ++ ++F +E +R H
Sbjct: 7 IDFKQLNFLTKLNENHSGELWKGRWQGNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSH 66
Query: 349 KNVVQFIGACTKPPS--LCIVTEFMSGGSVYDYLHK-LKGVFKLPSLLKVAIDVSKGMNY 405
NV+ +GAC PP+ ++T + GS+Y+ LH+ V +K A+D ++G +
Sbjct: 67 PNVLPVLGACQSPPAPHPTLITHWXPYGSLYNVLHEGTNFVVDQSQAVKFALDXARGXAF 126
Query: 406 LH--QNNIIHRDLKAANLLMDENEVVKVADFGVARVKAQSGVMTAETGTYRWMAPEVIEH 463
LH + I L + ++ +DE+ +++ V G A W+APE ++
Sbjct: 127 LHTLEPLIPRHALNSRSVXIDEDXTARISXADVKFSFQSPGRXYAPA----WVAPEALQK 182
Query: 464 KPYD---HKADVFSFGIVLWELLTGKLPYEYLT 493
KP D AD +SF ++LWEL+T ++P+ L+
Sbjct: 183 KPEDTNRRSADXWSFAVLLWELVTREVPFADLS 215
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 102 bits (255), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 75/254 (29%), Positives = 133/254 (52%), Gaps = 27/254 (10%)
Query: 253 WPSHRSSSPTSEPEDTGMKSHPYHLKIPNDGTDVWEIDPKHLKFGSKV--------ASGS 304
W + + + P DT + P+ D EI PK + K+ SG+
Sbjct: 330 WAADKGPQREALPMDTEVFESPF--------ADPEEIRPKEVYLDRKLLTLEDKELGSGN 381
Query: 305 YGDLYRGTY----CSQDVAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQFIGACTK 360
+G + +G Y + VA+K+LK E + ++ E E +M+++ + +V+ IG C +
Sbjct: 382 FGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGIC-E 440
Query: 361 PPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDLKAAN 420
S +V E G + YL + + V K +++++ VS GM YL ++N +HRDL A N
Sbjct: 441 AESWMLVMEMAELGPLNKYLQQNRHV-KDKNIIELVHQVSMGMKYLEESNFVHRDLAARN 499
Query: 421 LLMDENEVVKVADFGVAR-VKAQSGVMTAET-GTY--RWMAPEVIEHKPYDHKADVFSFG 476
+L+ K++DFG+++ ++A A+T G + +W APE I + + K+DV+SFG
Sbjct: 500 VLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFG 559
Query: 477 IVLWELLT-GKLPY 489
+++WE + G+ PY
Sbjct: 560 VLMWEAFSYGQKPY 573
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 102 bits (255), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 65/219 (29%), Positives = 111/219 (50%), Gaps = 6/219 (2%)
Query: 294 LKFGSKVASGSYGDLY--RGTYCSQDVAIKVL-KPERINSDMQKEFAQEVFIMRKVRHKN 350
+ G + G +G++Y R +A+KVL K + + ++ + +EV I +RH N
Sbjct: 15 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 74
Query: 351 VVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNN 410
+++ G + ++ E+ G VY L KL F +++ ++Y H
Sbjct: 75 ILRLYGYFHDATRVYLILEYAPRGEVYKELQKLSK-FDEQRTATYITELANALSYCHSKR 133
Query: 411 IIHRDLKAANLLMDENEVVKVADFGVARVKAQSGVMTAETGTYRWMAPEVIEHKPYDHKA 470
+IHRD+K NLL+ +K+ADFG + V A S T GT ++ PE+IE + +D K
Sbjct: 134 VIHRDIKPENLLLGSAGELKIADFGWS-VHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKV 192
Query: 471 DVFSFGIVLWELLTGKLPYEYLTPLQAAVGVVQKVHHSF 509
D++S G++ +E L GK P+E T Q + +V +F
Sbjct: 193 DLWSLGVLCYEFLVGKPPFEANT-YQETYKRISRVEFTF 230
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 102 bits (255), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 60/195 (30%), Positives = 105/195 (53%), Gaps = 7/195 (3%)
Query: 300 VASGSYGDLYRGT--YCSQDVAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQFIGA 357
+ GS+G++ + Q+ A+KV+ + +EV +++K+ H N+++
Sbjct: 30 LGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEI 89
Query: 358 CTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDLK 417
S IV E +GG ++D + K K F ++ V G+ Y+H++NI+HRDLK
Sbjct: 90 LEDSSSFYIVGELYTGGELFDEIIKRKR-FSEHDAARIIKQVFSGITYMHKHNIVHRDLK 148
Query: 418 AANLLMDENEV---VKVADFGVARVKAQSGVMTAETGTYRWMAPEVIEHKPYDHKADVFS 474
N+L++ E +K+ DFG++ Q+ M GT ++APEV+ YD K DV+S
Sbjct: 149 PENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRIGTAYYIAPEVL-RGTYDEKCDVWS 207
Query: 475 FGIVLWELLTGKLPY 489
G++L+ LL+G P+
Sbjct: 208 AGVILYILLSGTPPF 222
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 102 bits (255), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 67/230 (29%), Positives = 116/230 (50%), Gaps = 8/230 (3%)
Query: 283 GTDVWEIDPKHLKFGSKVASGSYGDLY--RGTYCSQDVAIKVL-KPERINSDMQKEFAQE 339
G W ++ + G + G +G++Y R +A+KVL K + + ++ + +E
Sbjct: 1 GPRQWALE--DFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRRE 58
Query: 340 VFIMRKVRHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDV 399
V I +RH N+++ G + ++ E+ G+VY L KL F ++
Sbjct: 59 VEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK-FDEQRTATYITEL 117
Query: 400 SKGMNYLHQNNIIHRDLKAANLLMDENEVVKVADFGVARVKAQSGVMTAETGTYRWMAPE 459
+ ++Y H +IHRD+K NLL+ +K+ADFG + V A S T GT ++ PE
Sbjct: 118 ANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS-VHAPSSRRTELCGTLDYLPPE 176
Query: 460 VIEHKPYDHKADVFSFGIVLWELLTGKLPYEYLTPLQAAVGVVQKVHHSF 509
+IE + +D K D++S G++ +E L GK P+E T Q + +V +F
Sbjct: 177 MIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANT-YQETYKRISRVEFTF 225
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 102 bits (255), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 65/219 (29%), Positives = 111/219 (50%), Gaps = 6/219 (2%)
Query: 294 LKFGSKVASGSYGDLY--RGTYCSQDVAIKVL-KPERINSDMQKEFAQEVFIMRKVRHKN 350
+ G + G +G++Y R +A+KVL K + + ++ + +EV I +RH N
Sbjct: 15 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 74
Query: 351 VVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNN 410
+++ G + ++ E+ G+VY L KL F +++ ++Y H
Sbjct: 75 ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK-FDEQRTATYITELANALSYCHSKR 133
Query: 411 IIHRDLKAANLLMDENEVVKVADFGVARVKAQSGVMTAETGTYRWMAPEVIEHKPYDHKA 470
+IHRD+K NLL+ +K+ADFG + V A S T GT ++ PE IE + +D K
Sbjct: 134 VIHRDIKPENLLLGSAGELKIADFGWS-VHAPSSRRTTLCGTLDYLPPEXIEGRXHDEKV 192
Query: 471 DVFSFGIVLWELLTGKLPYEYLTPLQAAVGVVQKVHHSF 509
D++S G++ +E L GK P+E T Q + +V +F
Sbjct: 193 DLWSLGVLCYEFLVGKPPFEANT-YQETYKRISRVEFTF 230
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 102 bits (254), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 65/219 (29%), Positives = 112/219 (51%), Gaps = 6/219 (2%)
Query: 294 LKFGSKVASGSYGDLY--RGTYCSQDVAIKVL-KPERINSDMQKEFAQEVFIMRKVRHKN 350
+ G + G +G++Y R +A+KVL K + + ++ + +EV I +RH N
Sbjct: 13 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 72
Query: 351 VVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNN 410
+++ G + ++ E+ G+VY L KL F +++ ++Y H
Sbjct: 73 ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK-FDEQRTATYITELANALSYCHSKR 131
Query: 411 IIHRDLKAANLLMDENEVVKVADFGVARVKAQSGVMTAETGTYRWMAPEVIEHKPYDHKA 470
+IHRD+K NLL+ +K+ADFG + V A S T GT ++ PE+IE + +D K
Sbjct: 132 VIHRDIKPENLLLGSAGELKIADFGWS-VHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKV 190
Query: 471 DVFSFGIVLWELLTGKLPYEYLTPLQAAVGVVQKVHHSF 509
D++S G++ +E L GK P+E T Q + +V +F
Sbjct: 191 DLWSLGVLCYEFLVGKPPFEANT-YQETYKRISRVEFTF 228
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 102 bits (254), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 64/200 (32%), Positives = 104/200 (52%), Gaps = 10/200 (5%)
Query: 300 VASGSYGDLYRGTYCSQD-VAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQFIGAC 358
+ G +G +Y+G VA+K LK ER + +F EV ++ H+N+++ G C
Sbjct: 38 LGRGGFGKVYKGRLADGXLVAVKRLKEERTQGG-ELQFQTEVEMISMAVHRNLLRLRGFC 96
Query: 359 TKPPSLCIVTEFMSGGSVYDYLHKL---KGVFKLPSLLKVAIDVSKGMNYLHQN---NII 412
P +V +M+ GSV L + + P ++A+ ++G+ YLH + II
Sbjct: 97 MTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGSARGLAYLHDHCDPKII 156
Query: 413 HRDLKAANLLMDENEVVKVADFGVARVK--AQSGVMTAETGTYRWMAPEVIEHKPYDHKA 470
HRD+KAAN+L+DE V DFG+A++ V A G +APE + K
Sbjct: 157 HRDVKAANILLDEEFEAVVGDFGLAKLMDYKDXHVXXAVRGXIGHIAPEYLSTGKSSEKT 216
Query: 471 DVFSFGIVLWELLTGKLPYE 490
DVF +G++L EL+TG+ ++
Sbjct: 217 DVFGYGVMLLELITGQRAFD 236
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 102 bits (254), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 65/219 (29%), Positives = 112/219 (51%), Gaps = 6/219 (2%)
Query: 294 LKFGSKVASGSYGDLY--RGTYCSQDVAIKVL-KPERINSDMQKEFAQEVFIMRKVRHKN 350
+ G + G +G++Y R +A+KVL K + + ++ + +EV I +RH N
Sbjct: 15 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 74
Query: 351 VVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNN 410
+++ G + ++ E+ G+VY L KL F +++ ++Y H
Sbjct: 75 ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK-FDEQRTATYITELANALSYCHSKR 133
Query: 411 IIHRDLKAANLLMDENEVVKVADFGVARVKAQSGVMTAETGTYRWMAPEVIEHKPYDHKA 470
+IHRD+K NLL+ +K+ADFG + V A S T GT ++ PE+IE + +D K
Sbjct: 134 VIHRDIKPENLLLGSAGELKIADFGWS-VHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKV 192
Query: 471 DVFSFGIVLWELLTGKLPYEYLTPLQAAVGVVQKVHHSF 509
D++S G++ +E L GK P+E T Q + +V +F
Sbjct: 193 DLWSLGVLCYEFLVGKPPFEANT-YQETYKRISRVEFTF 230
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 102 bits (254), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 60/195 (30%), Positives = 105/195 (53%), Gaps = 7/195 (3%)
Query: 300 VASGSYGDLYRGT--YCSQDVAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQFIGA 357
+ GS+G++ + Q+ A+KV+ + +EV +++K+ H N+++
Sbjct: 30 LGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEI 89
Query: 358 CTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDLK 417
S IV E +GG ++D + K K F ++ V G+ Y+H++NI+HRDLK
Sbjct: 90 LEDSSSFYIVGELYTGGELFDEIIKRKR-FSEHDAARIIKQVFSGITYMHKHNIVHRDLK 148
Query: 418 AANLLMDENEV---VKVADFGVARVKAQSGVMTAETGTYRWMAPEVIEHKPYDHKADVFS 474
N+L++ E +K+ DFG++ Q+ M GT ++APEV+ YD K DV+S
Sbjct: 149 PENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRIGTAYYIAPEVL-RGTYDEKCDVWS 207
Query: 475 FGIVLWELLTGKLPY 489
G++L+ LL+G P+
Sbjct: 208 AGVILYILLSGTPPF 222
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 102 bits (254), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 67/230 (29%), Positives = 116/230 (50%), Gaps = 8/230 (3%)
Query: 283 GTDVWEIDPKHLKFGSKVASGSYGDLY--RGTYCSQDVAIKVL-KPERINSDMQKEFAQE 339
G W ++ + G + G +G++Y R +A+KVL K + + ++ + +E
Sbjct: 1 GKRQWALE--DFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRRE 58
Query: 340 VFIMRKVRHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDV 399
V I +RH N+++ G + ++ E+ G+VY L KL F ++
Sbjct: 59 VEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK-FDEQRTATYITEL 117
Query: 400 SKGMNYLHQNNIIHRDLKAANLLMDENEVVKVADFGVARVKAQSGVMTAETGTYRWMAPE 459
+ ++Y H +IHRD+K NLL+ +K+ADFG + V A S T GT ++ PE
Sbjct: 118 ANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS-VHAPSSRRTXLCGTLDYLPPE 176
Query: 460 VIEHKPYDHKADVFSFGIVLWELLTGKLPYEYLTPLQAAVGVVQKVHHSF 509
+IE + +D K D++S G++ +E L GK P+E T Q + +V +F
Sbjct: 177 MIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANT-YQETYKRISRVEFTF 225
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 102 bits (254), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 63/193 (32%), Positives = 103/193 (53%), Gaps = 6/193 (3%)
Query: 300 VASGSYGD--LYRGTYCSQDVAIKVLKPERINSDMQKEFAQ-EVFIMRKVRHKNVVQFIG 356
+ +GS+G L R + + A+KVLK E + Q E E ++ V H +++ G
Sbjct: 14 LGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWG 73
Query: 357 ACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDL 416
+ ++ +++ GG ++ L K + F P A +V + YLH +II+RDL
Sbjct: 74 TFQDAQQIFMIMDYIEGGELFSLLRKSQR-FPNPVAKFYAAEVCLALEYLHSKDIIYRDL 132
Query: 417 KAANLLMDENEVVKVADFGVARVKAQSGVMTAETGTYRWMAPEVIEHKPYDHKADVFSFG 476
K N+L+D+N +K+ DFG A K V GT ++APEV+ KPY+ D +SFG
Sbjct: 133 KPENILLDKNGHIKITDFGFA--KYVPDVTYXLCGTPDYIAPEVVSTKPYNKSIDWWSFG 190
Query: 477 IVLWELLTGKLPY 489
I+++E+L G P+
Sbjct: 191 ILIYEMLAGYTPF 203
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 102 bits (254), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 66/207 (31%), Positives = 110/207 (53%), Gaps = 19/207 (9%)
Query: 292 KHLKFGSKVASGSYGDLYRGTYC--------SQDVAIKVLKPERINSDMQKEFAQEVFIM 343
++LK + G +G + YC + VA+K LK + + + QE+ I+
Sbjct: 14 RYLKKIRDLGEGHFGKV--SLYCYDPTNDGTGEMVAVKALKAD-CGPQHRSGWKQEIDIL 70
Query: 344 RKVRHKNVVQFIGAC--TKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSK 401
R + H++++++ G C SL +V E++ GS+ DYL + L LL A + +
Sbjct: 71 RTLYHEHIIKYKGCCEDQGEKSLQLVMEYVPLGSLRDYLPRHS--IGLAQLLLFAQQICE 128
Query: 402 GMNYLHQNNIIHRDLKAANLLMDENEVVKVADFGVARV--KAQSGVMTAETGT--YRWMA 457
GM YLH + IHR+L A N+L+D + +VK+ DFG+A+ + E G W A
Sbjct: 129 GMAYLHSQHYIHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYA 188
Query: 458 PEVIEHKPYDHKADVFSFGIVLWELLT 484
PE ++ + + +DV+SFG+ L+ELLT
Sbjct: 189 PECLKEYKFYYASDVWSFGVTLYELLT 215
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 102 bits (254), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 62/200 (31%), Positives = 104/200 (52%), Gaps = 3/200 (1%)
Query: 299 KVASGSYGDLYRGTYCSQDVAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQFIGAC 358
K+ GS G + T S + V K + ++ EV IMR +H+NVV+ +
Sbjct: 158 KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSY 217
Query: 359 TKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDLKA 418
L +V EF+ GG++ D + + + V + V + ++ LH +IHRD+K+
Sbjct: 218 LVGDELWVVMEFLEGGALTDIVTHTR--MNEEQIAAVCLAVLQALSVLHAQGVIHRDIKS 275
Query: 419 ANLLMDENEVVKVADFG-VARVKAQSGVMTAETGTYRWMAPEVIEHKPYDHKADVFSFGI 477
++L+ + VK++DFG A+V + GT WMAPE+I PY + D++S GI
Sbjct: 276 DSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLPYGPEVDIWSLGI 335
Query: 478 VLWELLTGKLPYEYLTPLQA 497
++ E++ G+ PY PL+A
Sbjct: 336 MVIEMVDGEPPYFNEPPLKA 355
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 102 bits (254), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 65/219 (29%), Positives = 112/219 (51%), Gaps = 6/219 (2%)
Query: 294 LKFGSKVASGSYGDLY--RGTYCSQDVAIKVL-KPERINSDMQKEFAQEVFIMRKVRHKN 350
+ G + G +G++Y R +A+KVL K + + ++ + +EV I +RH N
Sbjct: 9 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 68
Query: 351 VVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNN 410
+++ G + ++ E+ G+VY L KL F +++ ++Y H
Sbjct: 69 ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK-FDEQRTATYITELANALSYCHSKR 127
Query: 411 IIHRDLKAANLLMDENEVVKVADFGVARVKAQSGVMTAETGTYRWMAPEVIEHKPYDHKA 470
+IHRD+K NLL+ +K+ADFG + V A S T GT ++ PE+IE + +D K
Sbjct: 128 VIHRDIKPENLLLGSAGELKIADFGWS-VHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKV 186
Query: 471 DVFSFGIVLWELLTGKLPYEYLTPLQAAVGVVQKVHHSF 509
D++S G++ +E L GK P+E T Q + +V +F
Sbjct: 187 DLWSLGVLCYEFLVGKPPFEANT-YQETYKRISRVEFTF 224
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 102 bits (253), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 65/219 (29%), Positives = 112/219 (51%), Gaps = 6/219 (2%)
Query: 294 LKFGSKVASGSYGDLY--RGTYCSQDVAIKVL-KPERINSDMQKEFAQEVFIMRKVRHKN 350
+ G + G +G++Y R +A+KVL K + + ++ + +EV I +RH N
Sbjct: 14 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 73
Query: 351 VVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNN 410
+++ G + ++ E+ G+VY L KL F +++ ++Y H
Sbjct: 74 ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK-FDEQRTATYITELANALSYCHSKR 132
Query: 411 IIHRDLKAANLLMDENEVVKVADFGVARVKAQSGVMTAETGTYRWMAPEVIEHKPYDHKA 470
+IHRD+K NLL+ +K+ADFG + V A S T GT ++ PE+IE + +D K
Sbjct: 133 VIHRDIKPENLLLGSAGELKIADFGWS-VHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKV 191
Query: 471 DVFSFGIVLWELLTGKLPYEYLTPLQAAVGVVQKVHHSF 509
D++S G++ +E L GK P+E T Q + +V +F
Sbjct: 192 DLWSLGVLCYEFLVGKPPFEANT-YQETYKRISRVEFTF 229
>pdb|1B6C|B Chain B, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|D Chain D, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|F Chain F, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|H Chain H, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1IAS|A Chain A, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|B Chain B, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|C Chain C, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|D Chain D, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|E Chain E, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|3FAA|A Chain A, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|B Chain B, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|C Chain C, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|D Chain D, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|E Chain E, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3KCF|A Chain A, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|B Chain B, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|C Chain C, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|D Chain D, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|E Chain E, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|2X7O|A Chain A, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|B Chain B, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|C Chain C, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|D Chain D, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|E Chain E, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
Length = 342
Score = 102 bits (253), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 78/291 (26%), Positives = 142/291 (48%), Gaps = 47/291 (16%)
Query: 266 EDTGMKSHPYHLKIPNDGTD----VWEIDPKHLKFGSKVASGSYGDLYRGTYCSQDVAIK 321
E T +K Y + G+ V + + + G +G+++RG + ++VA+K
Sbjct: 12 EGTTLKDLIYDMTTSGSGSGLPLLVQRTIARTIVLQESIGKGRFGEVWRGKWRGEEVAVK 71
Query: 322 VLKPERINSDMQKEFAQEVFIMRKVRHKNVVQFIGACTKP----PSLCIVTEFMSGGSVY 377
+ S ++ E++ +RH+N++ FI A K L +V+++ GS++
Sbjct: 72 IFSSREERSWFRE---AEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVSDYHEHGSLF 128
Query: 378 DYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQN--------NIIHRDLKAANLLMDENEVV 429
DYL++ + ++K+A+ + G+ +LH I HRDLK+ N+L+ +N
Sbjct: 129 DYLNRY--TVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTC 186
Query: 430 KVADFGVARVKAQSGVMTAE------TGTYRWMAPEVIE------HKPYDHKADVFSFGI 477
+AD G+A V+ S T + GT R+MAPEV++ H +AD+++ G+
Sbjct: 187 CIADLGLA-VRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGL 245
Query: 478 VLWEL-----LTG-----KLPYEYLTPLQAAVGVVQKVHHSFLEQRLRKSV 518
V WE+ + G +LPY L P +V ++KV EQ+LR ++
Sbjct: 246 VFWEIARRCSIGGIHEDYQLPYYDLVPSDPSVEEMRKV---VCEQKLRPNI 293
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 102 bits (253), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 71/240 (29%), Positives = 119/240 (49%), Gaps = 9/240 (3%)
Query: 260 SPTSEPEDTGMKSHPYHLKIPNDGTDVWEIDPK-HLKFGSKVASGSYGDLYRGTYCSQDV 318
SP EP+ + L++ D D P+ +L K+ GS G + T S
Sbjct: 1 SPQREPQRVSHEQFRAALQLVVDPGD-----PRSYLDNFIKIGEGSTGIVCIATVRSSGK 55
Query: 319 AIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQFIGACTKPPSLCIVTEFMSGGSVYD 378
+ V K + ++ EV IMR +H+NVV+ + L +V EF+ GG++ D
Sbjct: 56 LVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTD 115
Query: 379 YLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDLKAANLLMDENEVVKVADFG-VA 437
+ + + V + V + ++ LH +IHRD+K+ ++L+ + VK++DFG A
Sbjct: 116 IVTHTR--MNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCA 173
Query: 438 RVKAQSGVMTAETGTYRWMAPEVIEHKPYDHKADVFSFGIVLWELLTGKLPYEYLTPLQA 497
+V + GT WMAPE+I PY + D++S GI++ E++ G+ PY PL+A
Sbjct: 174 QVSKEVPRRKXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKA 233
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 102 bits (253), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 65/219 (29%), Positives = 112/219 (51%), Gaps = 6/219 (2%)
Query: 294 LKFGSKVASGSYGDLY--RGTYCSQDVAIKVL-KPERINSDMQKEFAQEVFIMRKVRHKN 350
+ G + G +G++Y R +A+KVL K + + ++ + +EV I +RH N
Sbjct: 13 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 72
Query: 351 VVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNN 410
+++ G + ++ E+ G+VY L KL F +++ ++Y H
Sbjct: 73 ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK-FDEQRTATYITELANALSYCHSKR 131
Query: 411 IIHRDLKAANLLMDENEVVKVADFGVARVKAQSGVMTAETGTYRWMAPEVIEHKPYDHKA 470
+IHRD+K NLL+ +K+ADFG + V A S T GT ++ PE+IE + +D K
Sbjct: 132 VIHRDIKPENLLLGSAGELKIADFGWS-VHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKV 190
Query: 471 DVFSFGIVLWELLTGKLPYEYLTPLQAAVGVVQKVHHSF 509
D++S G++ +E L GK P+E T Q + +V +F
Sbjct: 191 DLWSLGVLCYEFLVGKPPFEANT-YQETYKRISRVEFTF 228
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 102 bits (253), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 67/222 (30%), Positives = 111/222 (50%), Gaps = 22/222 (9%)
Query: 289 IDPKHLKFGSKVASGSYGDLYRGTYCSQD-----VAIKVLKPERINSDMQKEFAQEVFIM 343
I + G + G +G + +D VA+K+LK + I S +EF +E M
Sbjct: 20 IPEQQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACM 79
Query: 344 RKVRHKNVVQFIGACTKP------PSLCIVTEFMSGGSVYDYLHKLK---GVFKLP--SL 392
++ H +V + +G + P ++ FM G ++ +L + F LP +L
Sbjct: 80 KEFDHPHVAKLVGVSLRSRAKGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTL 139
Query: 393 LKVAIDVSKGMNYLHQNNIIHRDLKAANLLMDENEVVKVADFGVARVKAQSGVM----TA 448
++ +D++ GM YL N IHRDL A N ++ E+ V VADFG++R K SG A
Sbjct: 140 VRFMVDIACGMEYLSSRNFIHRDLAARNCMLAEDMTVCVADFGLSR-KIYSGDYYRQGCA 198
Query: 449 ETGTYRWMAPEVIEHKPYDHKADVFSFGIVLWELLT-GKLPY 489
+W+A E + Y +DV++FG+ +WE++T G+ PY
Sbjct: 199 SKLPVKWLALESLADNLYTVHSDVWAFGVTMWEIMTRGQTPY 240
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 102 bits (253), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 66/207 (31%), Positives = 110/207 (53%), Gaps = 19/207 (9%)
Query: 292 KHLKFGSKVASGSYGDLYRGTYC--------SQDVAIKVLKPERINSDMQKEFAQEVFIM 343
++LK + G +G + YC + VA+K LK + + + QE+ I+
Sbjct: 14 RYLKKIRDLGEGHFGKV--SLYCYDPTNDGTGEMVAVKALKAD-CGPQHRSGWKQEIDIL 70
Query: 344 RKVRHKNVVQFIGAC--TKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSK 401
R + H++++++ G C SL +V E++ GS+ DYL + L LL A + +
Sbjct: 71 RTLYHEHIIKYKGCCEDQGEKSLQLVMEYVPLGSLRDYLPRHS--IGLAQLLLFAQQICE 128
Query: 402 GMNYLHQNNIIHRDLKAANLLMDENEVVKVADFGVARV--KAQSGVMTAETGT--YRWMA 457
GM YLH + IHR+L A N+L+D + +VK+ DFG+A+ + E G W A
Sbjct: 129 GMAYLHAQHYIHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYA 188
Query: 458 PEVIEHKPYDHKADVFSFGIVLWELLT 484
PE ++ + + +DV+SFG+ L+ELLT
Sbjct: 189 PECLKEYKFYYASDVWSFGVTLYELLT 215
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 102 bits (253), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 65/219 (29%), Positives = 112/219 (51%), Gaps = 6/219 (2%)
Query: 294 LKFGSKVASGSYGDLY--RGTYCSQDVAIKVL-KPERINSDMQKEFAQEVFIMRKVRHKN 350
+ G + G +G++Y R +A+KVL K + + ++ + +EV I +RH N
Sbjct: 10 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 69
Query: 351 VVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNN 410
+++ G + ++ E+ G+VY L KL F +++ ++Y H
Sbjct: 70 ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK-FDEQRTATYITELANALSYCHSKR 128
Query: 411 IIHRDLKAANLLMDENEVVKVADFGVARVKAQSGVMTAETGTYRWMAPEVIEHKPYDHKA 470
+IHRD+K NLL+ +K+ADFG + V A S A GT ++ PE+IE + +D K
Sbjct: 129 VIHRDIKPENLLLGSAGELKIADFGWS-VHAPSSRRAALCGTLDYLPPEMIEGRMHDEKV 187
Query: 471 DVFSFGIVLWELLTGKLPYEYLTPLQAAVGVVQKVHHSF 509
D++S G++ +E L GK P+E T Q + +V +F
Sbjct: 188 DLWSLGVLCYEFLVGKPPFEANT-YQETYKRISRVEFTF 225
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 101 bits (252), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 68/233 (29%), Positives = 117/233 (50%), Gaps = 25/233 (10%)
Query: 284 TDVWEIDPKHLKFGSKVASGSYGDLYRG---TYCSQD----VAIKVLKPERINSDMQKEF 336
T V I ++ ++ G++G ++ C + VA+K LK N+ +K+F
Sbjct: 5 TFVQHIKRHNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNA--RKDF 62
Query: 337 AQEVFIMRKVRHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYL--HKLKGVFKL----- 389
+E ++ ++H+++V+F G C + L +V E+M G + +L H V
Sbjct: 63 HREAELLTNLQHEHIVKFYGVCVEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPP 122
Query: 390 -----PSLLKVAIDVSKGMNYLHQNNIIHRDLKAANLLMDENEVVKVADFGVARVKAQSG 444
+L +A ++ GM YL + +HRDL N L+ EN +VK+ DFG++R +
Sbjct: 123 TELTQSQMLHIAQQIAAGMVYLASQHFVHRDLATRNCLVGENLLVKIGDFGMSRDVYSTD 182
Query: 445 VMTAETGTY---RWMAPEVIEHKPYDHKADVFSFGIVLWELLT-GKLPYEYLT 493
T RWM PE I ++ + ++DV+S G+VLWE+ T GK P+ L+
Sbjct: 183 YYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLS 235
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 101 bits (252), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 65/219 (29%), Positives = 112/219 (51%), Gaps = 6/219 (2%)
Query: 294 LKFGSKVASGSYGDLY--RGTYCSQDVAIKVL-KPERINSDMQKEFAQEVFIMRKVRHKN 350
+ G + G +G++Y R +A+KVL K + + ++ + +EV I +RH N
Sbjct: 10 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 69
Query: 351 VVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNN 410
+++ G + ++ E+ G+VY L KL F +++ ++Y H
Sbjct: 70 ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK-FDEQRTATYITELANALSYCHSKR 128
Query: 411 IIHRDLKAANLLMDENEVVKVADFGVARVKAQSGVMTAETGTYRWMAPEVIEHKPYDHKA 470
+IHRD+K NLL+ +K+ADFG + V A S T GT ++ PE+IE + +D K
Sbjct: 129 VIHRDIKPENLLLGSAGELKIADFGWS-VHAPSSRRTDLCGTLDYLPPEMIEGRMHDEKV 187
Query: 471 DVFSFGIVLWELLTGKLPYEYLTPLQAAVGVVQKVHHSF 509
D++S G++ +E L GK P+E T Q + +V +F
Sbjct: 188 DLWSLGVLCYEFLVGKPPFEANT-YQETYKRISRVEFTF 225
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 101 bits (252), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 65/216 (30%), Positives = 111/216 (51%), Gaps = 6/216 (2%)
Query: 297 GSKVASGSYGDLY--RGTYCSQDVAIKVL-KPERINSDMQKEFAQEVFIMRKVRHKNVVQ 353
G + G +G++Y R +A+KVL K + + ++ + +EV I +RH N+++
Sbjct: 17 GRPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRHPNILR 76
Query: 354 FIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIH 413
G + ++ E+ G+VY L KL F +++ ++Y H +IH
Sbjct: 77 LYGYFHDATRVYLILEYAPLGTVYRELQKLSR-FDEQRTATYITELANALSYCHSKRVIH 135
Query: 414 RDLKAANLLMDENEVVKVADFGVARVKAQSGVMTAETGTYRWMAPEVIEHKPYDHKADVF 473
RD+K NLL+ N +K+ADFG + V A S T GT ++ PE+IE + +D K D++
Sbjct: 136 RDIKPENLLLGSNGELKIADFGWS-VHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLW 194
Query: 474 SFGIVLWELLTGKLPYEYLTPLQAAVGVVQKVHHSF 509
S G++ +E L G P+E T Q + +V +F
Sbjct: 195 SLGVLCYEFLVGMPPFEAHT-YQETYRRISRVEFTF 229
>pdb|1PY5|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With
Inhibitor
Length = 326
Score = 101 bits (252), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 72/253 (28%), Positives = 131/253 (51%), Gaps = 43/253 (16%)
Query: 300 VASGSYGDLYRGTYCSQDVAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQFIGACT 359
+ G +G+++RG + ++VA+K+ S ++ E++ +RH+N++ FI A
Sbjct: 37 IGKGRFGEVWRGKWRGEEVAVKIFSSREERSWFRE---AEIYQTVMLRHENILGFIAADN 93
Query: 360 KP----PSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQN------ 409
K L +V+++ GS++DYL++ + ++K+A+ + G+ +LH
Sbjct: 94 KDNGTWTQLWLVSDYHEHGSLFDYLNRY--TVTVEGMIKLALSTASGLAHLHMEIVGTQG 151
Query: 410 --NIIHRDLKAANLLMDENEVVKVADFGVARVKAQSGVMTAE------TGTYRWMAPEVI 461
I HRDLK+ N+L+ +N +AD G+A V+ S T + GT R+MAPEV+
Sbjct: 152 KPAIAHRDLKSKNILVKKNGTCCIADLGLA-VRHDSATDTIDIAPNHRVGTKRYMAPEVL 210
Query: 462 E------HKPYDHKADVFSFGIVLWEL-----LTG-----KLPYEYLTPLQAAVGVVQKV 505
+ H +AD+++ G+V WE+ + G +LPY L P +V ++KV
Sbjct: 211 DDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSVEEMRKV 270
Query: 506 HHSFLEQRLRKSV 518
EQ+LR ++
Sbjct: 271 ---VCEQKLRPNI 280
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 101 bits (252), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 64/219 (29%), Positives = 112/219 (51%), Gaps = 6/219 (2%)
Query: 294 LKFGSKVASGSYGDLY--RGTYCSQDVAIKVL-KPERINSDMQKEFAQEVFIMRKVRHKN 350
+ G + G +G++Y R +A+KVL K + + ++ + +EV I +RH N
Sbjct: 11 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 70
Query: 351 VVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNN 410
+++ G + ++ E+ G+VY L KL F +++ ++Y H
Sbjct: 71 ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK-FDEQRTATYITELANALSYCHSKR 129
Query: 411 IIHRDLKAANLLMDENEVVKVADFGVARVKAQSGVMTAETGTYRWMAPEVIEHKPYDHKA 470
+IHRD+K NLL+ +K+ADFG + A S T +GT ++ PE+IE + +D K
Sbjct: 130 VIHRDIKPENLLLGSAGELKIADFGWS-CHAPSSRRTTLSGTLDYLPPEMIEGRMHDEKV 188
Query: 471 DVFSFGIVLWELLTGKLPYEYLTPLQAAVGVVQKVHHSF 509
D++S G++ +E L GK P+E T Q + +V +F
Sbjct: 189 DLWSLGVLCYEFLVGKPPFEANT-YQETYKRISRVEFTF 226
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 101 bits (252), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 65/219 (29%), Positives = 112/219 (51%), Gaps = 6/219 (2%)
Query: 294 LKFGSKVASGSYGDLY--RGTYCSQDVAIKVL-KPERINSDMQKEFAQEVFIMRKVRHKN 350
+ G + G +G++Y R +A+KVL K + + ++ + +EV I +RH N
Sbjct: 11 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 70
Query: 351 VVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNN 410
+++ G + ++ E+ G+VY L KL F +++ ++Y H
Sbjct: 71 ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK-FDEQRTATYITELANALSYCHSKR 129
Query: 411 IIHRDLKAANLLMDENEVVKVADFGVARVKAQSGVMTAETGTYRWMAPEVIEHKPYDHKA 470
+IHRD+K NLL+ +K+ADFG + V A S T GT ++ PE+IE + +D K
Sbjct: 130 VIHRDIKPENLLLGSAGELKIADFGWS-VHAPSSRRTDLCGTLDYLPPEMIEGRMHDEKV 188
Query: 471 DVFSFGIVLWELLTGKLPYEYLTPLQAAVGVVQKVHHSF 509
D++S G++ +E L GK P+E T Q + +V +F
Sbjct: 189 DLWSLGVLCYEFLVGKPPFEANT-YQETYKRISRVEFTF 226
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 101 bits (252), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 65/219 (29%), Positives = 112/219 (51%), Gaps = 6/219 (2%)
Query: 294 LKFGSKVASGSYGDLY--RGTYCSQDVAIKVL-KPERINSDMQKEFAQEVFIMRKVRHKN 350
+ G + G +G++Y R +A+KVL K + + ++ + +EV I +RH N
Sbjct: 10 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 69
Query: 351 VVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNN 410
+++ G + ++ E+ G+VY L KL F +++ ++Y H
Sbjct: 70 ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK-FDEQRTATYITELANALSYCHSKR 128
Query: 411 IIHRDLKAANLLMDENEVVKVADFGVARVKAQSGVMTAETGTYRWMAPEVIEHKPYDHKA 470
+IHRD+K NLL+ +K+ADFG + V A S T GT ++ PE+IE + +D K
Sbjct: 129 VIHRDIKPENLLLGSAGELKIADFGWS-VHAPSSRRTDLCGTLDYLPPEMIEGRMHDEKV 187
Query: 471 DVFSFGIVLWELLTGKLPYEYLTPLQAAVGVVQKVHHSF 509
D++S G++ +E L GK P+E T Q + +V +F
Sbjct: 188 DLWSLGVLCYEFLVGKPPFEANT-YQETYKRISRVEFTF 225
>pdb|1RW8|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With Atp
Site Inhibitor
Length = 301
Score = 101 bits (252), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 72/253 (28%), Positives = 131/253 (51%), Gaps = 43/253 (16%)
Query: 300 VASGSYGDLYRGTYCSQDVAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQFIGACT 359
+ G +G+++RG + ++VA+K+ S ++ E++ +RH+N++ FI A
Sbjct: 12 IGKGRFGEVWRGKWRGEEVAVKIFSSREERSWFRE---AEIYQTVMLRHENILGFIAADN 68
Query: 360 KP----PSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQN------ 409
K L +V+++ GS++DYL++ + ++K+A+ + G+ +LH
Sbjct: 69 KDNGTWTQLWLVSDYHEHGSLFDYLNRY--TVTVEGMIKLALSTASGLAHLHMEIVGTQG 126
Query: 410 --NIIHRDLKAANLLMDENEVVKVADFGVARVKAQSGVMTAE------TGTYRWMAPEVI 461
I HRDLK+ N+L+ +N +AD G+A V+ S T + GT R+MAPEV+
Sbjct: 127 KPAIAHRDLKSKNILVKKNGTCCIADLGLA-VRHDSATDTIDIAPNHRVGTKRYMAPEVL 185
Query: 462 E------HKPYDHKADVFSFGIVLWEL-----LTG-----KLPYEYLTPLQAAVGVVQKV 505
+ H +AD+++ G+V WE+ + G +LPY L P +V ++KV
Sbjct: 186 DDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSVEEMRKV 245
Query: 506 HHSFLEQRLRKSV 518
EQ+LR ++
Sbjct: 246 ---VCEQKLRPNI 255
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 101 bits (252), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 66/207 (31%), Positives = 110/207 (53%), Gaps = 19/207 (9%)
Query: 292 KHLKFGSKVASGSYGDLYRGTYC--------SQDVAIKVLKPERINSDMQKEFAQEVFIM 343
++LK + G +G + YC + VA+K LK E ++ + +E+ I+
Sbjct: 8 RYLKKIRDLGEGHFGKV--SLYCYDPTNDGTGEMVAVKALK-EGCGPQLRSGWQREIEIL 64
Query: 344 RKVRHKNVVQFIGAC--TKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSK 401
R + H+++V++ G C S+ +V E++ GS+ DYL + L LL A + +
Sbjct: 65 RTLYHEHIVKYKGCCEDQGEKSVQLVMEYVPLGSLRDYLPR--HCVGLAQLLLFAQQICE 122
Query: 402 GMNYLHQNNIIHRDLKAANLLMDENEVVKVADFGVARV--KAQSGVMTAETGT--YRWMA 457
GM YLH + IHR L A N+L+D + +VK+ DFG+A+ + E G W A
Sbjct: 123 GMAYLHAQHYIHRALAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYA 182
Query: 458 PEVIEHKPYDHKADVFSFGIVLWELLT 484
PE ++ + + +DV+SFG+ L+ELLT
Sbjct: 183 PECLKECKFYYASDVWSFGVTLYELLT 209
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 101 bits (252), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 71/240 (29%), Positives = 119/240 (49%), Gaps = 9/240 (3%)
Query: 260 SPTSEPEDTGMKSHPYHLKIPNDGTDVWEIDPK-HLKFGSKVASGSYGDLYRGTYCSQDV 318
SP EP+ + L++ D D P+ +L K+ GS G + T S
Sbjct: 46 SPQREPQRVSHEQFRAALQLVVDPGD-----PRSYLDNFIKIGEGSTGIVCIATVRSSGK 100
Query: 319 AIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQFIGACTKPPSLCIVTEFMSGGSVYD 378
+ V K + ++ EV IMR +H+NVV+ + L +V EF+ GG++ D
Sbjct: 101 LVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTD 160
Query: 379 YLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDLKAANLLMDENEVVKVADFG-VA 437
+ + + V + V + ++ LH +IHRD+K+ ++L+ + VK++DFG A
Sbjct: 161 IVTHTR--MNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCA 218
Query: 438 RVKAQSGVMTAETGTYRWMAPEVIEHKPYDHKADVFSFGIVLWELLTGKLPYEYLTPLQA 497
+V + GT WMAPE+I PY + D++S GI++ E++ G+ PY PL+A
Sbjct: 219 QVSKEVPRRKXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKA 278
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 101 bits (252), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 65/219 (29%), Positives = 112/219 (51%), Gaps = 6/219 (2%)
Query: 294 LKFGSKVASGSYGDLY--RGTYCSQDVAIKVL-KPERINSDMQKEFAQEVFIMRKVRHKN 350
+ G + G +G++Y R +A+KVL K + + ++ + +EV I +RH N
Sbjct: 15 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 74
Query: 351 VVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNN 410
+++ G + ++ E+ G+VY L KL F +++ ++Y H
Sbjct: 75 ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK-FDEQRTATYITELANALSYCHSKR 133
Query: 411 IIHRDLKAANLLMDENEVVKVADFGVARVKAQSGVMTAETGTYRWMAPEVIEHKPYDHKA 470
+IHRD+K NLL+ +K+ADFG + V A S T GT ++ PE+IE + +D K
Sbjct: 134 VIHRDIKPENLLLGSAGELKIADFGWS-VHAPSSRRTDLCGTLDYLPPEMIEGRMHDEKV 192
Query: 471 DVFSFGIVLWELLTGKLPYEYLTPLQAAVGVVQKVHHSF 509
D++S G++ +E L GK P+E T Q + +V +F
Sbjct: 193 DLWSLGVLCYEFLVGKPPFEANT-YQETYKRISRVEFTF 230
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 101 bits (252), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 66/207 (31%), Positives = 110/207 (53%), Gaps = 19/207 (9%)
Query: 292 KHLKFGSKVASGSYGDLYRGTYC--------SQDVAIKVLKPERINSDMQKEFAQEVFIM 343
++LK + G +G + YC + VA+K LK E ++ + +E+ I+
Sbjct: 9 RYLKKIRDLGEGHFGKV--SLYCYDPTNDGTGEMVAVKALK-EGCGPQLRSGWQREIEIL 65
Query: 344 RKVRHKNVVQFIGAC--TKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSK 401
R + H+++V++ G C S+ +V E++ GS+ DYL + L LL A + +
Sbjct: 66 RTLYHEHIVKYKGCCEDQGEKSVQLVMEYVPLGSLRDYLPR--HCVGLAQLLLFAQQICE 123
Query: 402 GMNYLHQNNIIHRDLKAANLLMDENEVVKVADFGVARV--KAQSGVMTAETGT--YRWMA 457
GM YLH + IHR L A N+L+D + +VK+ DFG+A+ + E G W A
Sbjct: 124 GMAYLHAQHYIHRALAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYA 183
Query: 458 PEVIEHKPYDHKADVFSFGIVLWELLT 484
PE ++ + + +DV+SFG+ L+ELLT
Sbjct: 184 PECLKECKFYYASDVWSFGVTLYELLT 210
>pdb|3TZM|A Chain A, Tgf-Beta Receptor Type 1 In Complex With Sb431542
Length = 309
Score = 101 bits (252), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 72/253 (28%), Positives = 131/253 (51%), Gaps = 43/253 (16%)
Query: 300 VASGSYGDLYRGTYCSQDVAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQFIGACT 359
+ G +G+++RG + ++VA+K+ S ++ E++ +RH+N++ FI A
Sbjct: 17 IGKGRFGEVWRGKWRGEEVAVKIFSSREERSWFRE---AEIYQTVMLRHENILGFIAADN 73
Query: 360 KP----PSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQN------ 409
K L +V+++ GS++DYL++ + ++K+A+ + G+ +LH
Sbjct: 74 KDNGTWTQLWLVSDYHEHGSLFDYLNRY--TVTVEGMIKLALSTASGLAHLHMEIVGTQG 131
Query: 410 --NIIHRDLKAANLLMDENEVVKVADFGVARVKAQSGVMTAE------TGTYRWMAPEVI 461
I HRDLK+ N+L+ +N +AD G+A V+ S T + GT R+MAPEV+
Sbjct: 132 KPAIAHRDLKSKNILVKKNGTCCIADLGLA-VRHDSATDTIDIAPNHRVGTKRYMAPEVL 190
Query: 462 E------HKPYDHKADVFSFGIVLWEL-----LTG-----KLPYEYLTPLQAAVGVVQKV 505
+ H +AD+++ G+V WE+ + G +LPY L P +V ++KV
Sbjct: 191 DDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSVEEMRKV 250
Query: 506 HHSFLEQRLRKSV 518
EQ+LR ++
Sbjct: 251 ---VCEQKLRPNI 260
>pdb|1VJY|A Chain A, Crystal Structure Of A Naphthyridine Inhibitor Of Human
Tgf- Beta Type I Receptor
pdb|3GXL|A Chain A, Alk-5 Kinase Complex With Gw857175
pdb|3HMM|A Chain A, Structure Of Alk5 + Gw855857
Length = 303
Score = 101 bits (252), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 72/253 (28%), Positives = 131/253 (51%), Gaps = 43/253 (16%)
Query: 300 VASGSYGDLYRGTYCSQDVAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQFIGACT 359
+ G +G+++RG + ++VA+K+ S ++ E++ +RH+N++ FI A
Sbjct: 11 IGKGRFGEVWRGKWRGEEVAVKIFSSREERSWFRE---AEIYQTVMLRHENILGFIAADN 67
Query: 360 KP----PSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQN------ 409
K L +V+++ GS++DYL++ + ++K+A+ + G+ +LH
Sbjct: 68 KDNGTWTQLWLVSDYHEHGSLFDYLNRY--TVTVEGMIKLALSTASGLAHLHMEIVGTQG 125
Query: 410 --NIIHRDLKAANLLMDENEVVKVADFGVARVKAQSGVMTAE------TGTYRWMAPEVI 461
I HRDLK+ N+L+ +N +AD G+A V+ S T + GT R+MAPEV+
Sbjct: 126 KPAIAHRDLKSKNILVKKNGTCCIADLGLA-VRHDSATDTIDIAPNHRVGTKRYMAPEVL 184
Query: 462 E------HKPYDHKADVFSFGIVLWEL-----LTG-----KLPYEYLTPLQAAVGVVQKV 505
+ H +AD+++ G+V WE+ + G +LPY L P +V ++KV
Sbjct: 185 DDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSVEEMRKV 244
Query: 506 HHSFLEQRLRKSV 518
EQ+LR ++
Sbjct: 245 ---VCEQKLRPNI 254
>pdb|2WOT|A Chain A, Alk5 In Complex With 4-((5,6-Dimethyl-2-(2-Pyridyl)-3-
Pyridyl)oxy)-N-(3,4,5-Trimethoxyphenyl)pyridin-2-Amine
pdb|2WOU|A Chain A, Alk5 In Complex With
4-((4-((2,6-Dimethyl-3-Pyridyl)oxy)-2-
Pyridyl)amino)benzenesulfonamide
Length = 306
Score = 101 bits (252), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 72/253 (28%), Positives = 131/253 (51%), Gaps = 43/253 (16%)
Query: 300 VASGSYGDLYRGTYCSQDVAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQFIGACT 359
+ G +G+++RG + ++VA+K+ S ++ E++ +RH+N++ FI A
Sbjct: 14 IGKGRFGEVWRGKWRGEEVAVKIFSSREERSWFRE---AEIYQTVMLRHENILGFIAADN 70
Query: 360 KP----PSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQN------ 409
K L +V+++ GS++DYL++ + ++K+A+ + G+ +LH
Sbjct: 71 KDNGTWTQLWLVSDYHEHGSLFDYLNRY--TVTVEGMIKLALSTASGLAHLHMEIVGTQG 128
Query: 410 --NIIHRDLKAANLLMDENEVVKVADFGVARVKAQSGVMTAE------TGTYRWMAPEVI 461
I HRDLK+ N+L+ +N +AD G+A V+ S T + GT R+MAPEV+
Sbjct: 129 KPAIAHRDLKSKNILVKKNGTCCIADLGLA-VRHDSATDTIDIAPNHRVGTKRYMAPEVL 187
Query: 462 E------HKPYDHKADVFSFGIVLWEL-----LTG-----KLPYEYLTPLQAAVGVVQKV 505
+ H +AD+++ G+V WE+ + G +LPY L P +V ++KV
Sbjct: 188 DDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSVEEMRKV 247
Query: 506 HHSFLEQRLRKSV 518
EQ+LR ++
Sbjct: 248 ---VCEQKLRPNI 257
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 65/210 (30%), Positives = 109/210 (51%), Gaps = 4/210 (1%)
Query: 290 DPK-HLKFGSKVASGSYGDLYRGTYCSQDVAIKVLKPERINSDMQKEFAQEVFIMRKVRH 348
DP+ +L K+ GS G + T S + V K + ++ EV IMR +H
Sbjct: 21 DPRSYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQH 80
Query: 349 KNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQ 408
+NVV+ + L +V EF+ GG++ D + + + V + V + ++ LH
Sbjct: 81 ENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTHTR--MNEEQIAAVCLAVLQALSVLHA 138
Query: 409 NNIIHRDLKAANLLMDENEVVKVADFG-VARVKAQSGVMTAETGTYRWMAPEVIEHKPYD 467
+IHRD+K+ ++L+ + VK++DFG A+V + GT WMAPE+I PY
Sbjct: 139 QGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLPYG 198
Query: 468 HKADVFSFGIVLWELLTGKLPYEYLTPLQA 497
+ D++S GI++ E++ G+ PY PL+A
Sbjct: 199 PEVDIWSLGIMVIEMVDGEPPYFNEPPLKA 228
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 65/210 (30%), Positives = 109/210 (51%), Gaps = 4/210 (1%)
Query: 290 DPK-HLKFGSKVASGSYGDLYRGTYCSQDVAIKVLKPERINSDMQKEFAQEVFIMRKVRH 348
DP+ +L K+ GS G + T S + V K + ++ EV IMR +H
Sbjct: 17 DPRSYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQH 76
Query: 349 KNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQ 408
+NVV+ + L +V EF+ GG++ D + + + V + V + ++ LH
Sbjct: 77 ENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTHTR--MNEEQIAAVCLAVLQALSVLHA 134
Query: 409 NNIIHRDLKAANLLMDENEVVKVADFG-VARVKAQSGVMTAETGTYRWMAPEVIEHKPYD 467
+IHRD+K+ ++L+ + VK++DFG A+V + GT WMAPE+I PY
Sbjct: 135 QGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLPYG 194
Query: 468 HKADVFSFGIVLWELLTGKLPYEYLTPLQA 497
+ D++S GI++ E++ G+ PY PL+A
Sbjct: 195 PEVDIWSLGIMVIEMVDGEPPYFNEPPLKA 224
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 65/219 (29%), Positives = 112/219 (51%), Gaps = 6/219 (2%)
Query: 294 LKFGSKVASGSYGDLY--RGTYCSQDVAIKVL-KPERINSDMQKEFAQEVFIMRKVRHKN 350
+ G + G +G++Y R +A+KVL K + + ++ + +EV I +RH N
Sbjct: 10 FEIGRPLGKGKFGNVYLAREKNSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 69
Query: 351 VVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNN 410
+++ G + ++ E+ G+VY L KL F +++ ++Y H
Sbjct: 70 ILRLYGYFHDSTRVYLILEYAPLGTVYRELQKLSK-FDEQRTATYITELANALSYCHSKK 128
Query: 411 IIHRDLKAANLLMDENEVVKVADFGVARVKAQSGVMTAETGTYRWMAPEVIEHKPYDHKA 470
+IHRD+K NLL+ +K+ADFG + V A S A GT ++ PE+IE + +D K
Sbjct: 129 VIHRDIKPENLLLGSAGELKIADFGWS-VHAPSSRRAALCGTLDYLPPEMIEGRMHDEKV 187
Query: 471 DVFSFGIVLWELLTGKLPYEYLTPLQAAVGVVQKVHHSF 509
D++S G++ +E L GK P+E T Q + +V +F
Sbjct: 188 DLWSLGVLCYEFLVGKPPFEANT-YQDTYKRISRVEFTF 225
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 65/219 (29%), Positives = 112/219 (51%), Gaps = 6/219 (2%)
Query: 294 LKFGSKVASGSYGDLY--RGTYCSQDVAIKVL-KPERINSDMQKEFAQEVFIMRKVRHKN 350
+ G + G +G++Y R +A+KVL K + + ++ + +EV I +RH N
Sbjct: 7 FEIGRPLGKGKFGNVYLAREKQRKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 66
Query: 351 VVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNN 410
+++ G + ++ E+ G+VY L KL F +++ ++Y H
Sbjct: 67 ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK-FDEQRTATYITELANALSYCHSKR 125
Query: 411 IIHRDLKAANLLMDENEVVKVADFGVARVKAQSGVMTAETGTYRWMAPEVIEHKPYDHKA 470
+IHRD+K NLL+ +K+ADFG + V A S T GT ++ PE+IE + +D K
Sbjct: 126 VIHRDIKPENLLLGSAGELKIADFGWS-VHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKV 184
Query: 471 DVFSFGIVLWELLTGKLPYEYLTPLQAAVGVVQKVHHSF 509
D++S G++ +E L GK P+E T Q + +V +F
Sbjct: 185 DLWSLGVLCYEFLVGKPPFEANT-YQETYKRISRVEFTF 222
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 100 bits (250), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 64/219 (29%), Positives = 112/219 (51%), Gaps = 6/219 (2%)
Query: 294 LKFGSKVASGSYGDLY--RGTYCSQDVAIKVL-KPERINSDMQKEFAQEVFIMRKVRHKN 350
+ G + G +G++Y R +A+KVL K + + ++ + +EV I +RH N
Sbjct: 12 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 71
Query: 351 VVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNN 410
+++ G + ++ E+ G+VY L KL F +++ ++Y H
Sbjct: 72 ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK-FDEQRTATYITELANALSYCHSKR 130
Query: 411 IIHRDLKAANLLMDENEVVKVADFGVARVKAQSGVMTAETGTYRWMAPEVIEHKPYDHKA 470
+IHRD+K NLL+ +K+A+FG + V A S T GT ++ PE+IE + +D K
Sbjct: 131 VIHRDIKPENLLLGSAGELKIANFGWS-VHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKV 189
Query: 471 DVFSFGIVLWELLTGKLPYEYLTPLQAAVGVVQKVHHSF 509
D++S G++ +E L GK P+E T Q + +V +F
Sbjct: 190 DLWSLGVLCYEFLVGKPPFEANT-YQETYKRISRVEFTF 227
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 64/219 (29%), Positives = 111/219 (50%), Gaps = 6/219 (2%)
Query: 294 LKFGSKVASGSYGDLY--RGTYCSQDVAIKVL-KPERINSDMQKEFAQEVFIMRKVRHKN 350
+ G + G +G++Y R +A+KVL K + + ++ + +EV I +RH N
Sbjct: 36 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 95
Query: 351 VVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNN 410
+++ G + ++ E+ G+VY L KL F +++ ++Y H
Sbjct: 96 ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK-FDEQRTATYITELANALSYCHSKR 154
Query: 411 IIHRDLKAANLLMDENEVVKVADFGVARVKAQSGVMTAETGTYRWMAPEVIEHKPYDHKA 470
+IHRD+K NLL+ +K+ADFG + V A S GT ++ PE+IE + +D K
Sbjct: 155 VIHRDIKPENLLLGSAGELKIADFGWS-VHAPSSRRDDLCGTLDYLPPEMIEGRMHDEKV 213
Query: 471 DVFSFGIVLWELLTGKLPYEYLTPLQAAVGVVQKVHHSF 509
D++S G++ +E L GK P+E T Q + +V +F
Sbjct: 214 DLWSLGVLCYEFLVGKPPFEANT-YQETYKRISRVEFTF 251
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 67/214 (31%), Positives = 112/214 (52%), Gaps = 12/214 (5%)
Query: 287 WEIDPKHLKFGSKVASGSYGDLYRGTY--CSQDVAIKVLKPERINSDMQKEFAQEV-FIM 343
W+ + LK ++ G+YG + + + Q +A+K ++ ++ QK+ ++ +M
Sbjct: 17 WDFTAEDLKDLGEIGRGAYGSVNKMVHKPSGQIMAVKRIR-STVDEKEQKQLLMDLDVVM 75
Query: 344 RKVRHKNVVQFIGACTKPPSLCIVTEFMSGG--SVYDYLHK-LKGVFKLPSLLKVAIDVS 400
R +VQF GA + I E MS Y Y++ L V L K+ +
Sbjct: 76 RSSDCPYIVQFYGALFREGDCWICMELMSTSFDKFYKYVYSVLDDVIPEEILGKITLATV 135
Query: 401 KGMNYLHQN-NIIHRDLKAANLLMDENEVVKVADFGVARVKAQSGVMTAETGTYRWMAPE 459
K +N+L +N IIHRD+K +N+L+D + +K+ DFG++ S T + G +MAPE
Sbjct: 136 KALNHLKENLKIIHRDIKPSNILLDRSGNIKLCDFGISGQLVDSIAKTRDAGCRPYMAPE 195
Query: 460 VIE----HKPYDHKADVFSFGIVLWELLTGKLPY 489
I+ + YD ++DV+S GI L+EL TG+ PY
Sbjct: 196 RIDPSASRQGYDVRSDVWSLGITLYELATGRFPY 229
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 64/234 (27%), Positives = 114/234 (48%), Gaps = 31/234 (13%)
Query: 285 DVWEIDPKHLKFGSKVASGSYGDLYRGTY-------CSQDVAIKVLKPERINSDMQKEFA 337
D WE+ + + ++ GS+G +Y G VA+K + E + + EF
Sbjct: 7 DEWEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVN-ESASLRERIEFL 65
Query: 338 QEVFIMRKVRHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFK--------- 388
E +M+ +VV+ +G +K +V E M+ G + YL L+ +
Sbjct: 66 NEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPT 125
Query: 389 LPSLLKVAIDVSKGMNYLHQNNIIHRDLKAANLLMDENEVVKVADFGVAR--------VK 440
L ++++A +++ GM YL+ +HRDL A N ++ + VK+ DFG+ R K
Sbjct: 126 LQEMIQMAAEIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRK 185
Query: 441 AQSGVMTAETGTYRWMAPEVIEHKPYDHKADVFSFGIVLWELLT-GKLPYEYLT 493
G++ RWMAPE ++ + +D++SFG+VLWE+ + + PY+ L+
Sbjct: 186 GGKGLLPV-----RWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLS 234
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 64/219 (29%), Positives = 112/219 (51%), Gaps = 6/219 (2%)
Query: 294 LKFGSKVASGSYGDLY--RGTYCSQDVAIKVL-KPERINSDMQKEFAQEVFIMRKVRHKN 350
+ G + G +G++Y R +A+KVL K + + ++ + +EV I +RH N
Sbjct: 13 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 72
Query: 351 VVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNN 410
+++ G + ++ E+ G+VY L KL F +++ ++Y H
Sbjct: 73 ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK-FDEQRTATYITELANALSYCHSKR 131
Query: 411 IIHRDLKAANLLMDENEVVKVADFGVARVKAQSGVMTAETGTYRWMAPEVIEHKPYDHKA 470
+IHRD+K NLL+ +K+A+FG + V A S T GT ++ PE+IE + +D K
Sbjct: 132 VIHRDIKPENLLLGSAGELKIANFGWS-VHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKV 190
Query: 471 DVFSFGIVLWELLTGKLPYEYLTPLQAAVGVVQKVHHSF 509
D++S G++ +E L GK P+E T Q + +V +F
Sbjct: 191 DLWSLGVLCYEFLVGKPPFEANT-YQETYKRISRVEFTF 228
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 69/219 (31%), Positives = 122/219 (55%), Gaps = 19/219 (8%)
Query: 288 EIDPKHLKFGSKV--------ASGSYGDLYRGTY----CSQDVAIKVLKPERINSDMQKE 335
EI PK + K+ SG++G + +G Y + VA+K+LK E + ++ E
Sbjct: 13 EIRPKEVYLDRKLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDE 72
Query: 336 FAQEVFIMRKVRHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKV 395
E +M+++ + +V+ IG C + S +V E G + YL + + V K +++++
Sbjct: 73 LLAEANVMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHV-KDKNIIEL 130
Query: 396 AIDVSKGMNYLHQNNIIHRDLKAANLLMDENEVVKVADFGVAR-VKAQSGVMTAET-GTY 453
VS GM YL ++N +HRDL A N+L+ K++DFG+++ ++A A+T G +
Sbjct: 131 VHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKW 190
Query: 454 --RWMAPEVIEHKPYDHKADVFSFGIVLWELLT-GKLPY 489
+W APE I + + K+DV+SFG+++WE + G+ PY
Sbjct: 191 PVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPY 229
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 64/234 (27%), Positives = 114/234 (48%), Gaps = 31/234 (13%)
Query: 285 DVWEIDPKHLKFGSKVASGSYGDLYRGTY-------CSQDVAIKVLKPERINSDMQKEFA 337
D WE+ + + ++ GS+G +Y G VA+K + E + + EF
Sbjct: 10 DEWEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVN-ESASLRERIEFL 68
Query: 338 QEVFIMRKVRHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFK--------- 388
E +M+ +VV+ +G +K +V E M+ G + YL L+ +
Sbjct: 69 NEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPT 128
Query: 389 LPSLLKVAIDVSKGMNYLHQNNIIHRDLKAANLLMDENEVVKVADFGVAR--------VK 440
L ++++A +++ GM YL+ +HRDL A N ++ + VK+ DFG+ R K
Sbjct: 129 LQEMIQMAAEIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRK 188
Query: 441 AQSGVMTAETGTYRWMAPEVIEHKPYDHKADVFSFGIVLWELLT-GKLPYEYLT 493
G++ RWMAPE ++ + +D++SFG+VLWE+ + + PY+ L+
Sbjct: 189 GGKGLLPV-----RWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLS 237
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 69/219 (31%), Positives = 122/219 (55%), Gaps = 19/219 (8%)
Query: 288 EIDPKHLKFGSKV--------ASGSYGDLYRGTY----CSQDVAIKVLKPERINSDMQKE 335
EI PK + K+ SG++G + +G Y + VA+K+LK E + ++ E
Sbjct: 15 EIRPKEVYLDRKLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDE 74
Query: 336 FAQEVFIMRKVRHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKV 395
E +M+++ + +V+ IG C + S +V E G + YL + + V K +++++
Sbjct: 75 LLAEANVMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHV-KDKNIIEL 132
Query: 396 AIDVSKGMNYLHQNNIIHRDLKAANLLMDENEVVKVADFGVAR-VKAQSGVMTAET-GTY 453
VS GM YL ++N +HRDL A N+L+ K++DFG+++ ++A A+T G +
Sbjct: 133 VHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKW 192
Query: 454 --RWMAPEVIEHKPYDHKADVFSFGIVLWELLT-GKLPY 489
+W APE I + + K+DV+SFG+++WE + G+ PY
Sbjct: 193 PVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPY 231
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 69/219 (31%), Positives = 122/219 (55%), Gaps = 19/219 (8%)
Query: 288 EIDPKHLKFGSKV--------ASGSYGDLYRGTY----CSQDVAIKVLKPERINSDMQKE 335
EI PK + K+ SG++G + +G Y + VA+K+LK E + ++ E
Sbjct: 15 EIRPKEVYLDRKLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDE 74
Query: 336 FAQEVFIMRKVRHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKV 395
E +M+++ + +V+ IG C + S +V E G + YL + + V K +++++
Sbjct: 75 LLAEANVMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHV-KDKNIIEL 132
Query: 396 AIDVSKGMNYLHQNNIIHRDLKAANLLMDENEVVKVADFGVAR-VKAQSGVMTAET-GTY 453
VS GM YL ++N +HRDL A N+L+ K++DFG+++ ++A A+T G +
Sbjct: 133 VHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKW 192
Query: 454 --RWMAPEVIEHKPYDHKADVFSFGIVLWELLT-GKLPY 489
+W APE I + + K+DV+SFG+++WE + G+ PY
Sbjct: 193 PVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPY 231
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 66/230 (28%), Positives = 116/230 (50%), Gaps = 8/230 (3%)
Query: 283 GTDVWEIDPKHLKFGSKVASGSYGDLY--RGTYCSQDVAIKVL-KPERINSDMQKEFAQE 339
G+ W ++ + G + G +G++Y R +A+KVL K + + ++ + +E
Sbjct: 4 GSRQWALE--DFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRRE 61
Query: 340 VFIMRKVRHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDV 399
V I +RH N+++ G + ++ E+ G+VY L KL F ++
Sbjct: 62 VEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK-FDEQRTATYITEL 120
Query: 400 SKGMNYLHQNNIIHRDLKAANLLMDENEVVKVADFGVARVKAQSGVMTAETGTYRWMAPE 459
+ ++Y H +IHRD+K NLL+ +K+ADFG + V A S GT ++ PE
Sbjct: 121 ANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS-VHAPSSRRDDLCGTLDYLPPE 179
Query: 460 VIEHKPYDHKADVFSFGIVLWELLTGKLPYEYLTPLQAAVGVVQKVHHSF 509
+IE + +D K D++S G++ +E L GK P+E T Q + +V +F
Sbjct: 180 MIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANT-YQETYKRISRVEFTF 228
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 64/234 (27%), Positives = 114/234 (48%), Gaps = 31/234 (13%)
Query: 285 DVWEIDPKHLKFGSKVASGSYGDLYRGTY-------CSQDVAIKVLKPERINSDMQKEFA 337
D WE+ + + ++ GS+G +Y G VA+K + E + + EF
Sbjct: 10 DEWEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVN-ESASLRERIEFL 68
Query: 338 QEVFIMRKVRHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFK--------- 388
E +M+ +VV+ +G +K +V E M+ G + YL L+ +
Sbjct: 69 NEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPT 128
Query: 389 LPSLLKVAIDVSKGMNYLHQNNIIHRDLKAANLLMDENEVVKVADFGVAR--------VK 440
L ++++A +++ GM YL+ +HRDL A N ++ + VK+ DFG+ R K
Sbjct: 129 LQEMIQMAAEIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRK 188
Query: 441 AQSGVMTAETGTYRWMAPEVIEHKPYDHKADVFSFGIVLWELLT-GKLPYEYLT 493
G++ RWMAPE ++ + +D++SFG+VLWE+ + + PY+ L+
Sbjct: 189 GGKGLLPV-----RWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLS 237
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 66/230 (28%), Positives = 115/230 (50%), Gaps = 8/230 (3%)
Query: 283 GTDVWEIDPKHLKFGSKVASGSYGDLY--RGTYCSQDVAIKVL-KPERINSDMQKEFAQE 339
G W ++ + G + G +G++Y R +A+KVL K + + ++ + +E
Sbjct: 1 GKRQWALE--DFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRRE 58
Query: 340 VFIMRKVRHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDV 399
V I +RH N+++ G + ++ E+ G+VY L KL F ++
Sbjct: 59 VEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK-FDEQRTATYITEL 117
Query: 400 SKGMNYLHQNNIIHRDLKAANLLMDENEVVKVADFGVARVKAQSGVMTAETGTYRWMAPE 459
+ ++Y H +IHRD+K NLL+ +K+ADFG + V A S GT ++ PE
Sbjct: 118 ANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS-VHAPSSRRXXLCGTLDYLPPE 176
Query: 460 VIEHKPYDHKADVFSFGIVLWELLTGKLPYEYLTPLQAAVGVVQKVHHSF 509
+IE + +D K D++S G++ +E L GK P+E T Q + +V +F
Sbjct: 177 MIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANT-YQETYKRISRVEFTF 225
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 69/219 (31%), Positives = 122/219 (55%), Gaps = 19/219 (8%)
Query: 288 EIDPKHLKFGSKV--------ASGSYGDLYRGTY----CSQDVAIKVLKPERINSDMQKE 335
EI PK + K+ SG++G + +G Y + VA+K+LK E + ++ E
Sbjct: 5 EIRPKEVYLDRKLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDE 64
Query: 336 FAQEVFIMRKVRHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKV 395
E +M+++ + +V+ IG C + S +V E G + YL + + V K +++++
Sbjct: 65 LLAEANVMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHV-KDKNIIEL 122
Query: 396 AIDVSKGMNYLHQNNIIHRDLKAANLLMDENEVVKVADFGVAR-VKAQSGVMTAET-GTY 453
VS GM YL ++N +HRDL A N+L+ K++DFG+++ ++A A+T G +
Sbjct: 123 VHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKW 182
Query: 454 --RWMAPEVIEHKPYDHKADVFSFGIVLWELLT-GKLPY 489
+W APE I + + K+DV+SFG+++WE + G+ PY
Sbjct: 183 PVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPY 221
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 64/219 (29%), Positives = 110/219 (50%), Gaps = 6/219 (2%)
Query: 294 LKFGSKVASGSYGDLY--RGTYCSQDVAIKVL-KPERINSDMQKEFAQEVFIMRKVRHKN 350
+ G + G +G++Y R +A+KVL K + + ++ + +EV I +RH N
Sbjct: 15 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 74
Query: 351 VVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNN 410
+++ G + ++ E+ G VY L KL F +++ ++Y H
Sbjct: 75 ILRLYGYFHDATRVYLILEYAPRGEVYKELQKLSK-FDEQRTATYITELANALSYCHSKR 133
Query: 411 IIHRDLKAANLLMDENEVVKVADFGVARVKAQSGVMTAETGTYRWMAPEVIEHKPYDHKA 470
+IHRD+K NLL+ +K+ADFG + V A S GT ++ PE+IE + +D K
Sbjct: 134 VIHRDIKPENLLLGSAGELKIADFGWS-VHAPSSRRXXLXGTLDYLPPEMIEGRMHDEKV 192
Query: 471 DVFSFGIVLWELLTGKLPYEYLTPLQAAVGVVQKVHHSF 509
D++S G++ +E L GK P+E T Q + +V +F
Sbjct: 193 DLWSLGVLCYEFLVGKPPFEANT-YQETYKRISRVEFTF 230
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 64/219 (29%), Positives = 111/219 (50%), Gaps = 6/219 (2%)
Query: 294 LKFGSKVASGSYGDLY--RGTYCSQDVAIKVL-KPERINSDMQKEFAQEVFIMRKVRHKN 350
+ G + G +G++Y R +A+KVL K + + ++ + +EV I +RH N
Sbjct: 12 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 71
Query: 351 VVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNN 410
+++ G + ++ E+ G+VY L KL F +++ ++Y H
Sbjct: 72 ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK-FDEQRTATYITELANALSYCHSKR 130
Query: 411 IIHRDLKAANLLMDENEVVKVADFGVARVKAQSGVMTAETGTYRWMAPEVIEHKPYDHKA 470
+IHRD+K NLL+ +K+ADFG + V A S GT ++ PE+IE + +D K
Sbjct: 131 VIHRDIKPENLLLGSAGELKIADFGWS-VHAPSSRRXXLCGTLDYLPPEMIEGRMHDEKV 189
Query: 471 DVFSFGIVLWELLTGKLPYEYLTPLQAAVGVVQKVHHSF 509
D++S G++ +E L GK P+E T Q + +V +F
Sbjct: 190 DLWSLGVLCYEFLVGKPPFEANT-YQETYKRISRVEFTF 227
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 64/219 (29%), Positives = 111/219 (50%), Gaps = 6/219 (2%)
Query: 294 LKFGSKVASGSYGDLY--RGTYCSQDVAIKVL-KPERINSDMQKEFAQEVFIMRKVRHKN 350
+ G + G +G++Y R +A+KVL K + + ++ + +EV I +RH N
Sbjct: 11 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 70
Query: 351 VVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNN 410
+++ G + ++ E+ G+VY L KL F +++ ++Y H
Sbjct: 71 ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK-FDEQRTATYITELANALSYCHSKR 129
Query: 411 IIHRDLKAANLLMDENEVVKVADFGVARVKAQSGVMTAETGTYRWMAPEVIEHKPYDHKA 470
+IHRD+K NLL+ +K+ADFG + V A S GT ++ PE+IE + +D K
Sbjct: 130 VIHRDIKPENLLLGSAGELKIADFGWS-VHAPSSRRDTLCGTLDYLPPEMIEGRMHDEKV 188
Query: 471 DVFSFGIVLWELLTGKLPYEYLTPLQAAVGVVQKVHHSF 509
D++S G++ +E L GK P+E T Q + +V +F
Sbjct: 189 DLWSLGVLCYEFLVGKPPFEANT-YQETYKRISRVEFTF 226
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 64/234 (27%), Positives = 114/234 (48%), Gaps = 31/234 (13%)
Query: 285 DVWEIDPKHLKFGSKVASGSYGDLYRGTY-------CSQDVAIKVLKPERINSDMQKEFA 337
D WE+ + + ++ GS+G +Y G VA+K + E + + EF
Sbjct: 10 DEWEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVN-ESASLRERIEFL 68
Query: 338 QEVFIMRKVRHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFK--------- 388
E +M+ +VV+ +G +K +V E M+ G + YL L+ +
Sbjct: 69 NEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPT 128
Query: 389 LPSLLKVAIDVSKGMNYLHQNNIIHRDLKAANLLMDENEVVKVADFGVAR--------VK 440
L ++++A +++ GM YL+ +HRDL A N ++ + VK+ DFG+ R K
Sbjct: 129 LQEMIQMAAEIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETAYYRK 188
Query: 441 AQSGVMTAETGTYRWMAPEVIEHKPYDHKADVFSFGIVLWELLT-GKLPYEYLT 493
G++ RWMAPE ++ + +D++SFG+VLWE+ + + PY+ L+
Sbjct: 189 GGKGLLPV-----RWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLS 237
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 64/234 (27%), Positives = 114/234 (48%), Gaps = 31/234 (13%)
Query: 285 DVWEIDPKHLKFGSKVASGSYGDLYRGTY-------CSQDVAIKVLKPERINSDMQKEFA 337
D WE+ + + ++ GS+G +Y G VA+K + E + + EF
Sbjct: 10 DEWEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVN-ESASLRERIEFL 68
Query: 338 QEVFIMRKVRHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFK--------- 388
E +M+ +VV+ +G +K +V E M+ G + YL L+ +
Sbjct: 69 NEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPT 128
Query: 389 LPSLLKVAIDVSKGMNYLHQNNIIHRDLKAANLLMDENEVVKVADFGVAR--------VK 440
L ++++A +++ GM YL+ +HRDL A N ++ + VK+ DFG+ R K
Sbjct: 129 LQEMIQMAAEIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRK 188
Query: 441 AQSGVMTAETGTYRWMAPEVIEHKPYDHKADVFSFGIVLWELLT-GKLPYEYLT 493
G++ RWMAPE ++ + +D++SFG+VLWE+ + + PY+ L+
Sbjct: 189 GGKGLLPV-----RWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLS 237
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 99.8 bits (247), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 68/211 (32%), Positives = 121/211 (57%), Gaps = 12/211 (5%)
Query: 289 IDPKHLKFGSK-VASGSYGDLYRGTY----CSQDVAIKVLKPERINSDMQKEFAQEVFIM 343
+D K L K + SG++G + +G Y + VA+K+LK E + ++ E E +M
Sbjct: 7 LDRKLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVM 66
Query: 344 RKVRHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGM 403
+++ + +V+ IG C + S +V E G + YL + + V K +++++ VS GM
Sbjct: 67 QQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHV-KDKNIIELVHQVSMGM 124
Query: 404 NYLHQNNIIHRDLKAANLLMDENEVVKVADFGVAR-VKAQSGVMTAET-GTY--RWMAPE 459
YL ++N +HRDL A N+L+ K++DFG+++ ++A A+T G + +W APE
Sbjct: 125 KYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPE 184
Query: 460 VIEHKPYDHKADVFSFGIVLWELLT-GKLPY 489
I + + K+DV+SFG+++WE + G+ PY
Sbjct: 185 CINYYKFSSKSDVWSFGVLMWEAFSYGQKPY 215
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 99.8 bits (247), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 68/211 (32%), Positives = 121/211 (57%), Gaps = 12/211 (5%)
Query: 289 IDPKHLKFGSK-VASGSYGDLYRGTY----CSQDVAIKVLKPERINSDMQKEFAQEVFIM 343
+D K L K + SG++G + +G Y + VA+K+LK E + ++ E E +M
Sbjct: 1 LDRKLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVM 60
Query: 344 RKVRHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGM 403
+++ + +V+ IG C + S +V E G + YL + + V K +++++ VS GM
Sbjct: 61 QQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHV-KDKNIIELVHQVSMGM 118
Query: 404 NYLHQNNIIHRDLKAANLLMDENEVVKVADFGVAR-VKAQSGVMTAET-GTY--RWMAPE 459
YL ++N +HRDL A N+L+ K++DFG+++ ++A A+T G + +W APE
Sbjct: 119 KYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPE 178
Query: 460 VIEHKPYDHKADVFSFGIVLWELLT-GKLPY 489
I + + K+DV+SFG+++WE + G+ PY
Sbjct: 179 CINYYKFSSKSDVWSFGVLMWEAFSYGQKPY 209
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 99.8 bits (247), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 68/211 (32%), Positives = 121/211 (57%), Gaps = 12/211 (5%)
Query: 289 IDPKHLKFGSK-VASGSYGDLYRGTY----CSQDVAIKVLKPERINSDMQKEFAQEVFIM 343
+D K L K + SG++G + +G Y + VA+K+LK E + ++ E E +M
Sbjct: 7 LDRKLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVM 66
Query: 344 RKVRHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGM 403
+++ + +V+ IG C + S +V E G + YL + + V K +++++ VS GM
Sbjct: 67 QQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHV-KDKNIIELVHQVSMGM 124
Query: 404 NYLHQNNIIHRDLKAANLLMDENEVVKVADFGVAR-VKAQSGVMTAET-GTY--RWMAPE 459
YL ++N +HRDL A N+L+ K++DFG+++ ++A A+T G + +W APE
Sbjct: 125 KYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENXYKAQTHGKWPVKWYAPE 184
Query: 460 VIEHKPYDHKADVFSFGIVLWELLT-GKLPY 489
I + + K+DV+SFG+++WE + G+ PY
Sbjct: 185 CINYYKFSSKSDVWSFGVLMWEAFSYGQKPY 215
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 99.8 bits (247), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 64/219 (29%), Positives = 111/219 (50%), Gaps = 6/219 (2%)
Query: 294 LKFGSKVASGSYGDLY--RGTYCSQDVAIKVL-KPERINSDMQKEFAQEVFIMRKVRHKN 350
+ G + G +G++Y R +A+KVL K + + ++ + +EV I +RH N
Sbjct: 13 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 72
Query: 351 VVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNN 410
+++ G + ++ E+ G+VY L KL F +++ ++Y H
Sbjct: 73 ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK-FDEQRTATYITELANALSYCHSKR 131
Query: 411 IIHRDLKAANLLMDENEVVKVADFGVARVKAQSGVMTAETGTYRWMAPEVIEHKPYDHKA 470
+IHRD+K NLL+ +K+ADFG + V A S GT ++ PE+IE + +D K
Sbjct: 132 VIHRDIKPENLLLGSAGELKIADFGWS-VHAPSSRRXXLCGTLDYLPPEMIEGRMHDEKV 190
Query: 471 DVFSFGIVLWELLTGKLPYEYLTPLQAAVGVVQKVHHSF 509
D++S G++ +E L GK P+E T Q + +V +F
Sbjct: 191 DLWSLGVLCYEFLVGKPPFEANT-YQETYKRISRVEFTF 228
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 99.8 bits (247), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 113/228 (49%), Gaps = 27/228 (11%)
Query: 288 EIDPKHLKFGSKVASGSYGDLYRGTYC-------SQDVAIKVLKPERINSDMQKEFAQEV 340
EI ++F ++ +G +Y+G +Q VAIK LK ++ +++EF E
Sbjct: 22 EISLSAVRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLK-DKAEGPLREEFRHEA 80
Query: 341 FIMRKVRHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYL---------------HKLKG 385
+ +++H NVV +G TK L ++ + S G ++++L +K
Sbjct: 81 MLRARLQHPNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKS 140
Query: 386 VFKLPSLLKVAIDVSKGMNYLHQNNIIHRDLKAANLLMDENEVVKVADFGVAR---VKAQ 442
+ P + + ++ GM YL ++++H+DL N+L+ + VK++D G+ R
Sbjct: 141 ALEPPDFVHLVAQIAAGMEYLSSHHVVHKDLATRNVLVYDKLNVKISDLGLFREVYAADY 200
Query: 443 SGVMTAETGTYRWMAPEVIEHKPYDHKADVFSFGIVLWELLT-GKLPY 489
++ RWMAPE I + + +D++S+G+VLWE+ + G PY
Sbjct: 201 YKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPY 248
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 99.4 bits (246), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 68/211 (32%), Positives = 121/211 (57%), Gaps = 12/211 (5%)
Query: 289 IDPKHLKFGSK-VASGSYGDLYRGTY----CSQDVAIKVLKPERINSDMQKEFAQEVFIM 343
+D K L K + SG++G + +G Y + VA+K+LK E + ++ E E +M
Sbjct: 3 LDRKLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVM 62
Query: 344 RKVRHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGM 403
+++ + +V+ IG C + S +V E G + YL + + V K +++++ VS GM
Sbjct: 63 QQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHV-KDKNIIELVHQVSMGM 120
Query: 404 NYLHQNNIIHRDLKAANLLMDENEVVKVADFGVAR-VKAQSGVMTAET-GTY--RWMAPE 459
YL ++N +HRDL A N+L+ K++DFG+++ ++A A+T G + +W APE
Sbjct: 121 KYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPE 180
Query: 460 VIEHKPYDHKADVFSFGIVLWELLT-GKLPY 489
I + + K+DV+SFG+++WE + G+ PY
Sbjct: 181 CINYYKFSSKSDVWSFGVLMWEAFSYGQKPY 211
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 99.4 bits (246), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 64/216 (29%), Positives = 110/216 (50%), Gaps = 6/216 (2%)
Query: 297 GSKVASGSYGDLY--RGTYCSQDVAIKVL-KPERINSDMQKEFAQEVFIMRKVRHKNVVQ 353
G + G +G++Y R +A+KVL K + + ++ + +EV I +RH N+++
Sbjct: 17 GRPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRHPNILR 76
Query: 354 FIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIH 413
G + ++ E+ G+VY L KL F +++ ++Y H +IH
Sbjct: 77 LYGYFHDATRVYLILEYAPLGTVYRELQKLSR-FDEQRTATYITELANALSYCHSKRVIH 135
Query: 414 RDLKAANLLMDENEVVKVADFGVARVKAQSGVMTAETGTYRWMAPEVIEHKPYDHKADVF 473
RD+K NLL+ N +K+ADFG + V A S GT ++ PE+IE + +D K D++
Sbjct: 136 RDIKPENLLLGSNGELKIADFGWS-VHAPSSRRDTLCGTLDYLPPEMIEGRMHDEKVDLW 194
Query: 474 SFGIVLWELLTGKLPYEYLTPLQAAVGVVQKVHHSF 509
S G++ +E L G P+E T Q + +V +F
Sbjct: 195 SLGVLCYEFLVGMPPFEAHT-YQETYRRISRVEFTF 229
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 99.4 bits (246), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 113/223 (50%), Gaps = 6/223 (2%)
Query: 286 VWEIDPKHLKFGSKVASGSYGDLY--RGTYCSQDVAIK-VLKPERINSDMQKEFAQEVFI 342
+ +I + K K+ G +Y T + VAIK + P R + K F +EV
Sbjct: 5 IGKIINERYKIVDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHN 64
Query: 343 MRKVRHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKG 402
++ H+N+V I + +V E++ G ++ +Y+ G + + + + G
Sbjct: 65 SSQLSHQNIVSMIDVDEEDDCYYLVMEYIEGPTLSEYIES-HGPLSVDTAINFTNQILDG 123
Query: 403 MNYLHQNNIIHRDLKAANLLMDENEVVKVADFGVARVKAQSGVMTAE--TGTYRWMAPEV 460
+ + H I+HRD+K N+L+D N+ +K+ DFG+A+ +++ + GT ++ +PE
Sbjct: 124 IKHAHDMRIVHRDIKPQNILIDSNKTLKIFDFGIAKALSETSLTQTNHVLGTVQYFSPEQ 183
Query: 461 IEHKPYDHKADVFSFGIVLWELLTGKLPYEYLTPLQAAVGVVQ 503
+ + D D++S GIVL+E+L G+ P+ T + A+ +Q
Sbjct: 184 AKGEATDECTDIYSIGIVLYEMLVGEPPFNGETAVSIAIKHIQ 226
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 99.4 bits (246), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 113/228 (49%), Gaps = 27/228 (11%)
Query: 288 EIDPKHLKFGSKVASGSYGDLYRGTYC-------SQDVAIKVLKPERINSDMQKEFAQEV 340
EI ++F ++ +G +Y+G +Q VAIK LK ++ +++EF E
Sbjct: 5 EISLSAVRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLK-DKAEGPLREEFRHEA 63
Query: 341 FIMRKVRHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYL---------------HKLKG 385
+ +++H NVV +G TK L ++ + S G ++++L +K
Sbjct: 64 MLRARLQHPNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKS 123
Query: 386 VFKLPSLLKVAIDVSKGMNYLHQNNIIHRDLKAANLLMDENEVVKVADFGVAR---VKAQ 442
+ P + + ++ GM YL ++++H+DL N+L+ + VK++D G+ R
Sbjct: 124 ALEPPDFVHLVAQIAAGMEYLSSHHVVHKDLATRNVLVYDKLNVKISDLGLFREVYAADY 183
Query: 443 SGVMTAETGTYRWMAPEVIEHKPYDHKADVFSFGIVLWELLT-GKLPY 489
++ RWMAPE I + + +D++S+G+VLWE+ + G PY
Sbjct: 184 YKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPY 231
>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3Q4T|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3SOC|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|3SOC|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|4ASX|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
pdb|4ASX|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
Length = 322
Score = 99.0 bits (245), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 69/228 (30%), Positives = 120/228 (52%), Gaps = 34/228 (14%)
Query: 301 ASGSYGDLYRGTYCSQDVAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQFIGACTK 360
A G +G +++ ++ VA+K+ P + Q E+ EV+ + ++H+N++QFIGA +
Sbjct: 33 ARGRFGCVWKAQLLNEYVAVKIF-PIQDKQSWQNEY--EVYSLPGMKHENILQFIGAEKR 89
Query: 361 PPS----LCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQN------- 409
S L ++T F GS+ D+L V L +A +++G+ YLH++
Sbjct: 90 GTSVDVDLWLITAFHEKGSLSDFLKA--NVVSWNELCHIAETMARGLAYLHEDIPGLKDG 147
Query: 410 ---NIIHRDLKAANLLMDENEVVKVADFGVARVKAQSGVMTAET----GTYRWMAPEVIE 462
I HRD+K+ N+L+ N +ADFG+A +K ++G +T GT R+MAPEV+E
Sbjct: 148 HKPAISHRDIKSKNVLLKNNLTACIADFGLA-LKFEAGKSAGDTHGQVGTRRYMAPEVLE 206
Query: 463 -----HKPYDHKADVFSFGIVLWELLTGKLPY-----EYLTPLQAAVG 500
+ + D+++ G+VLWEL + EY+ P + +G
Sbjct: 207 GAINFQRDAFLRIDMYAMGLVLWELASRCTAADGPVDEYMLPFEEEIG 254
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 98.6 bits (244), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 59/196 (30%), Positives = 107/196 (54%), Gaps = 8/196 (4%)
Query: 300 VASGSYGD--LYRGTYCSQDVAIKVLKPERINSDMQKE-FAQEVFIMRKVRHKNVVQFIG 356
+ GS+G+ L + Q+ A+KV+ ++ KE +EV +++++ H N+++
Sbjct: 57 LGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYE 116
Query: 357 ACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDL 416
+V E +GG ++D + K F ++ V G+ Y+H+N I+HRDL
Sbjct: 117 FFEDKGYFYLVGEVYTGGELFDEIISRK-RFSEVDAARIIRQVLSGITYMHKNKIVHRDL 175
Query: 417 KAANLLMD---ENEVVKVADFGVARVKAQSGVMTAETGTYRWMAPEVIEHKPYDHKADVF 473
K NLL++ ++ +++ DFG++ S M + GT ++APEV+ H YD K DV+
Sbjct: 176 KPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKIGTAYYIAPEVL-HGTYDEKCDVW 234
Query: 474 SFGIVLWELLTGKLPY 489
S G++L+ LL+G P+
Sbjct: 235 STGVILYILLSGCPPF 250
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 98.2 bits (243), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 59/196 (30%), Positives = 107/196 (54%), Gaps = 8/196 (4%)
Query: 300 VASGSYGD--LYRGTYCSQDVAIKVLKPERINSDMQKE-FAQEVFIMRKVRHKNVVQFIG 356
+ GS+G+ L + Q+ A+KV+ ++ KE +EV +++++ H N+++
Sbjct: 58 LGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYE 117
Query: 357 ACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDL 416
+V E +GG ++D + K F ++ V G+ Y+H+N I+HRDL
Sbjct: 118 FFEDKGYFYLVGEVYTGGELFDEIISRK-RFSEVDAARIIRQVLSGITYMHKNKIVHRDL 176
Query: 417 KAANLLMD---ENEVVKVADFGVARVKAQSGVMTAETGTYRWMAPEVIEHKPYDHKADVF 473
K NLL++ ++ +++ DFG++ S M + GT ++APEV+ H YD K DV+
Sbjct: 177 KPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKIGTAYYIAPEVL-HGTYDEKCDVW 235
Query: 474 SFGIVLWELLTGKLPY 489
S G++L+ LL+G P+
Sbjct: 236 STGVILYILLSGCPPF 251
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 98.2 bits (243), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 63/234 (26%), Positives = 114/234 (48%), Gaps = 31/234 (13%)
Query: 285 DVWEIDPKHLKFGSKVASGSYGDLYRGTY-------CSQDVAIKVLKPERINSDMQKEFA 337
D WE+ + + ++ GS+G +Y G VA+K + E + + EF
Sbjct: 11 DEWEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVN-ESASLRERIEFL 69
Query: 338 QEVFIMRKVRHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFK--------- 388
E +M+ +VV+ +G +K +V E M+ G + YL L+ +
Sbjct: 70 NEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPT 129
Query: 389 LPSLLKVAIDVSKGMNYLHQNNIIHRDLKAANLLMDENEVVKVADFGVAR--------VK 440
L ++++A +++ GM YL+ +HR+L A N ++ + VK+ DFG+ R K
Sbjct: 130 LQEMIQMAAEIADGMAYLNAKKFVHRNLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRK 189
Query: 441 AQSGVMTAETGTYRWMAPEVIEHKPYDHKADVFSFGIVLWELLT-GKLPYEYLT 493
G++ RWMAPE ++ + +D++SFG+VLWE+ + + PY+ L+
Sbjct: 190 GGKGLLPV-----RWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLS 238
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 98.2 bits (243), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 59/196 (30%), Positives = 107/196 (54%), Gaps = 8/196 (4%)
Query: 300 VASGSYGD--LYRGTYCSQDVAIKVLKPERINSDMQKE-FAQEVFIMRKVRHKNVVQFIG 356
+ GS+G+ L + Q+ A+KV+ ++ KE +EV +++++ H N+++
Sbjct: 34 LGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYE 93
Query: 357 ACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDL 416
+V E +GG ++D + K F ++ V G+ Y+H+N I+HRDL
Sbjct: 94 FFEDKGYFYLVGEVYTGGELFDEIISRKR-FSEVDAARIIRQVLSGITYMHKNKIVHRDL 152
Query: 417 KAANLLMD---ENEVVKVADFGVARVKAQSGVMTAETGTYRWMAPEVIEHKPYDHKADVF 473
K NLL++ ++ +++ DFG++ S M + GT ++APEV+ H YD K DV+
Sbjct: 153 KPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKIGTAYYIAPEVL-HGTYDEKCDVW 211
Query: 474 SFGIVLWELLTGKLPY 489
S G++L+ LL+G P+
Sbjct: 212 STGVILYILLSGCPPF 227
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 98.2 bits (243), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 58/198 (29%), Positives = 111/198 (56%), Gaps = 10/198 (5%)
Query: 300 VASGSYGDLY----RGTYCSQDVAIKVLKPERI--NSDMQKEFAQEVFIMRKVRHKNVVQ 353
+ GS+G + +GT + AIK+LK + + + D++ ++ + + + Q
Sbjct: 27 LGKGSFGKVMLADRKGT--EELYAIKILKKDVVIQDDDVECTMVEKRVLALLDKPPFLTQ 84
Query: 354 FIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIH 413
L V E+++GG + ++ ++ G FK P + A ++S G+ +LH+ II+
Sbjct: 85 LHSCFQTVDRLYFVMEYVNGGDLMYHIQQV-GKFKEPQAVFYAAEISIGLFFLHKRGIIY 143
Query: 414 RDLKAANLLMDENEVVKVADFGVARVKAQSGVMTAE-TGTYRWMAPEVIEHKPYDHKADV 472
RDLK N+++D +K+ADFG+ + GV T E GT ++APE+I ++PY D
Sbjct: 144 RDLKLDNVMLDSEGHIKIADFGMCKEHMMDGVTTREFCGTPDYIAPEIIAYQPYGKSVDW 203
Query: 473 FSFGIVLWELLTGKLPYE 490
+++G++L+E+L G+ P++
Sbjct: 204 WAYGVLLYEMLAGQPPFD 221
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 63/234 (26%), Positives = 114/234 (48%), Gaps = 31/234 (13%)
Query: 285 DVWEIDPKHLKFGSKVASGSYGDLYRGTY-------CSQDVAIKVLKPERINSDMQKEFA 337
D WE+ + + ++ GS+G +Y G VA+K + E + + EF
Sbjct: 10 DEWEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVN-ESASLRERIEFL 68
Query: 338 QEVFIMRKVRHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFK--------- 388
E +M+ +VV+ +G +K +V E M+ G + YL L+ +
Sbjct: 69 NEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPT 128
Query: 389 LPSLLKVAIDVSKGMNYLHQNNIIHRDLKAANLLMDENEVVKVADFGVAR--------VK 440
L ++++A +++ GM YL+ +HR+L A N ++ + VK+ DFG+ R K
Sbjct: 129 LQEMIQMAAEIADGMAYLNAKKFVHRNLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRK 188
Query: 441 AQSGVMTAETGTYRWMAPEVIEHKPYDHKADVFSFGIVLWELLT-GKLPYEYLT 493
G++ RWMAPE ++ + +D++SFG+VLWE+ + + PY+ L+
Sbjct: 189 GGKGLLPV-----RWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLS 237
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 114/213 (53%), Gaps = 19/213 (8%)
Query: 290 DPKHLKFGSKVASGSYGDLYRGTYCSQD-----VAIKVLKP------ERINSDMQKEFAQ 338
DP H + + GS+G ++ ++ A+KVLK +R+ + M+++
Sbjct: 26 DPSHFELLKVLGQGSFGKVFLVRKVTRPDSGHLYAMKVLKKATLKVRDRVRTKMERD--- 82
Query: 339 EVFIMRKVRHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAID 398
I+ V H VV+ A L ++ +F+ GG ++ L K + +F + +
Sbjct: 83 ---ILADVNHPFVVKLHYAFQTEGKLYLILDFLRGGDLFTRLSK-EVMFTEEDVKFYLAE 138
Query: 399 VSKGMNYLHQNNIIHRDLKAANLLMDENEVVKVADFGVARVKA-QSGVMTAETGTYRWMA 457
++ G+++LH II+RDLK N+L+DE +K+ DFG+++ + GT +MA
Sbjct: 139 LALGLDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKEAIDHEKKAYSFCGTVEYMA 198
Query: 458 PEVIEHKPYDHKADVFSFGIVLWELLTGKLPYE 490
PEV+ + + H AD +S+G++++E+LTG LP++
Sbjct: 199 PEVVNRQGHSHSADWWSYGVLMFEMLTGSLPFQ 231
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 67/217 (30%), Positives = 112/217 (51%), Gaps = 9/217 (4%)
Query: 299 KVASGSYGD--LYRGTYCSQDVAIKVLKPERINSDMQK-EFAQEVFIMRKVRHKNVVQFI 355
K+ SG+YG+ L + + AIK++K + + EV +++++ H N+++
Sbjct: 11 KLGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQLDHPNIMKLY 70
Query: 356 GACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRD 415
+ +V E GG ++D + L+ F + V G YLH++NI+HRD
Sbjct: 71 EFFEDKRNYYLVMEVYRGGELFDEII-LRQKFSEVDAAVIMKQVLSGTTYLHKHNIVHRD 129
Query: 416 LKAANLLMD---ENEVVKVADFGVARVKAQSGVMTAETGTYRWMAPEVIEHKPYDHKADV 472
LK NLL++ + ++K+ DFG++ G M GT ++APEV+ K YD K DV
Sbjct: 130 LKPENLLLESKSRDALIKIVDFGLSAHFEVGGKMKERLGTAYYIAPEVL-RKKYDEKCDV 188
Query: 473 FSFGIVLWELLTGKLPYEYLTPLQAAVGVVQKVHHSF 509
+S G++L+ LL G P+ T Q + V+K SF
Sbjct: 189 WSCGVILYILLCGYPPFGGQTD-QEILKRVEKGKFSF 224
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 108/210 (51%), Gaps = 9/210 (4%)
Query: 288 EIDPKHLKFGSKVASGSYGDLYR-----GTYCSQDVAIKVLKPERI--NSDMQKEFAQEV 340
+I P+ + + G YG +++ G + A+KVLK I N+ E
Sbjct: 13 KIRPECFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAER 72
Query: 341 FIMRKVRHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVS 400
I+ +V+H +V I A L ++ E++SGG ++ L + +G+F + ++S
Sbjct: 73 NILEEVKHPFIVDLIYAFQTGGKLYLILEYLSGGELFMQLER-EGIFMEDTACFYLAEIS 131
Query: 401 KGMNYLHQNNIIHRDLKAANLLMDENEVVKVADFGVARVKAQSGVMT-AETGTYRWMAPE 459
+ +LHQ II+RDLK N++++ VK+ DFG+ + G +T GT +MAPE
Sbjct: 132 MALGHLHQKGIIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGTVTHTFCGTIEYMAPE 191
Query: 460 VIEHKPYDHKADVFSFGIVLWELLTGKLPY 489
++ ++ D +S G +++++LTG P+
Sbjct: 192 ILMRSGHNRAVDWWSLGALMYDMLTGAPPF 221
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 108/210 (51%), Gaps = 9/210 (4%)
Query: 288 EIDPKHLKFGSKVASGSYGDLYR-----GTYCSQDVAIKVLKPERI--NSDMQKEFAQEV 340
+I P+ + + G YG +++ G + A+KVLK I N+ E
Sbjct: 13 KIRPECFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAER 72
Query: 341 FIMRKVRHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVS 400
I+ +V+H +V I A L ++ E++SGG ++ L + +G+F + ++S
Sbjct: 73 NILEEVKHPFIVDLIYAFQTGGKLYLILEYLSGGELFMQLER-EGIFMEDTACFYLAEIS 131
Query: 401 KGMNYLHQNNIIHRDLKAANLLMDENEVVKVADFGVARVKAQSGVMTAE-TGTYRWMAPE 459
+ +LHQ II+RDLK N++++ VK+ DFG+ + G +T GT +MAPE
Sbjct: 132 MALGHLHQKGIIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGTVTHXFCGTIEYMAPE 191
Query: 460 VIEHKPYDHKADVFSFGIVLWELLTGKLPY 489
++ ++ D +S G +++++LTG P+
Sbjct: 192 ILMRSGHNRAVDWWSLGALMYDMLTGAPPF 221
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 63/203 (31%), Positives = 108/203 (53%), Gaps = 9/203 (4%)
Query: 299 KVASGSYG--DLYRGTYCSQDVAIKVLKPERINSDMQKEFA-QEVFIMRKVRHKNVVQFI 355
K+ GS G L R + + VA+K++ + ++E EV IMR +H NVV+
Sbjct: 52 KIGEGSTGIVCLAREKHSGRQVAVKMMD---LRKQQRRELLFNEVVIMRDYQHFNVVEMY 108
Query: 356 GACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRD 415
+ L ++ EF+ GG++ D + +++ + V V + + YLH +IHRD
Sbjct: 109 KSYLVGEELWVLMEFLQGGALTDIVSQVR--LNEEQIATVCEAVLQALAYLHAQGVIHRD 166
Query: 416 LKAANLLMDENEVVKVADFG-VARVKAQSGVMTAETGTYRWMAPEVIEHKPYDHKADVFS 474
+K+ ++L+ + VK++DFG A++ GT WMAPEVI Y + D++S
Sbjct: 167 IKSDSILLTLDGRVKLSDFGFCAQISKDVPKRKXLVGTPYWMAPEVISRSLYATEVDIWS 226
Query: 475 FGIVLWELLTGKLPYEYLTPLQA 497
GI++ E++ G+ PY +P+QA
Sbjct: 227 LGIMVIEMVDGEPPYFSDSPVQA 249
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 52/175 (29%), Positives = 94/175 (53%), Gaps = 5/175 (2%)
Query: 318 VAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQFIGACTKPPSLCIVTEFMSGGSVY 377
VAIK + E + + E+ ++ K++H N+V L ++ + +SGG ++
Sbjct: 46 VAIKCIAKEALEGK-EGSMENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELF 104
Query: 378 DYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDLKAANLL---MDENEVVKVADF 434
D + + KG + ++ V + YLH I+HRDLK NLL +DE+ + ++DF
Sbjct: 105 DRIVE-KGFYTERDASRLIFQVLDAVKYLHDLGIVHRDLKPENLLYYSLDEDSKIMISDF 163
Query: 435 GVARVKAQSGVMTAETGTYRWMAPEVIEHKPYDHKADVFSFGIVLWELLTGKLPY 489
G+++++ V++ GT ++APEV+ KPY D +S G++ + LL G P+
Sbjct: 164 GLSKMEDPGSVLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPF 218
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 66/217 (30%), Positives = 115/217 (52%), Gaps = 23/217 (10%)
Query: 300 VASGSYGDLYRGTYC-SQDVAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQFIGAC 358
+ G +G +Y+G VA+K PE +S +EF E+ + RH ++V IG C
Sbjct: 47 IGHGVFGKVYKGVLRDGAKVALKRRTPE--SSQGIEEFETEIETLSFCRHPHLVSLIGFC 104
Query: 359 TKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSL-------LKVAIDVSKGMNYLHQNNI 411
+ + ++ ++M G++ +L+ LP++ L++ I ++G++YLH I
Sbjct: 105 DERNEMILIYKYMENGNLKRHLYG----SDLPTMSMSWEQRLEICIGAARGLHYLHTRAI 160
Query: 412 IHRDLKAANLLMDENEVVKVADFGVARVKAQSG---VMTAETGTYRWMAPEVIEHKPYDH 468
IHRD+K+ N+L+DEN V K+ DFG+++ + G + GT ++ PE
Sbjct: 161 IHRDVKSINILLDENFVPKITDFGISKKGTELGQTHLXXVVKGTLGYIDPEYFIKGRLTE 220
Query: 469 KADVFSFGIVLWELLTGK------LPYEYLTPLQAAV 499
K+DV+SFG+VL+E+L + LP E + + AV
Sbjct: 221 KSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAV 257
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 52/175 (29%), Positives = 94/175 (53%), Gaps = 5/175 (2%)
Query: 318 VAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQFIGACTKPPSLCIVTEFMSGGSVY 377
VAIK + E + + E+ ++ K++H N+V L ++ + +SGG ++
Sbjct: 46 VAIKCIAKEALEGK-EGSMENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELF 104
Query: 378 DYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDLKAANLL---MDENEVVKVADF 434
D + + KG + ++ V + YLH I+HRDLK NLL +DE+ + ++DF
Sbjct: 105 DRIVE-KGFYTERDASRLIFQVLDAVKYLHDLGIVHRDLKPENLLYYSLDEDSKIMISDF 163
Query: 435 GVARVKAQSGVMTAETGTYRWMAPEVIEHKPYDHKADVFSFGIVLWELLTGKLPY 489
G+++++ V++ GT ++APEV+ KPY D +S G++ + LL G P+
Sbjct: 164 GLSKMEDPGSVLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPF 218
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 52/175 (29%), Positives = 94/175 (53%), Gaps = 5/175 (2%)
Query: 318 VAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQFIGACTKPPSLCIVTEFMSGGSVY 377
VAIK + E + + E+ ++ K++H N+V L ++ + +SGG ++
Sbjct: 46 VAIKCIAKEALEGK-EGSMENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELF 104
Query: 378 DYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDLKAANLL---MDENEVVKVADF 434
D + + KG + ++ V + YLH I+HRDLK NLL +DE+ + ++DF
Sbjct: 105 DRIVE-KGFYTERDASRLIFQVLDAVKYLHDLGIVHRDLKPENLLYYSLDEDSKIMISDF 163
Query: 435 GVARVKAQSGVMTAETGTYRWMAPEVIEHKPYDHKADVFSFGIVLWELLTGKLPY 489
G+++++ V++ GT ++APEV+ KPY D +S G++ + LL G P+
Sbjct: 164 GLSKMEDPGSVLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPF 218
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 59/196 (30%), Positives = 107/196 (54%), Gaps = 8/196 (4%)
Query: 300 VASGSYGD--LYRGTYCSQDVAIKVLKPERINSDMQKE-FAQEVFIMRKVRHKNVVQFIG 356
+ GS+G+ L + Q+ A+KV+ ++ KE +EV +++++ H N+++
Sbjct: 40 LGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYE 99
Query: 357 ACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDL 416
+V E +GG ++D + K F ++ V G+ Y+H+N I+HRDL
Sbjct: 100 FFEDKGYFYLVGEVYTGGELFDEIISRKR-FSEVDAARIIRQVLSGITYMHKNKIVHRDL 158
Query: 417 KAANLLMD---ENEVVKVADFGVARVKAQSGVMTAETGTYRWMAPEVIEHKPYDHKADVF 473
K NLL++ ++ +++ DFG++ S M + GT ++APEV+ H YD K DV+
Sbjct: 159 KPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKIGTAYYIAPEVL-HGTYDEKCDVW 217
Query: 474 SFGIVLWELLTGKLPY 489
S G++L+ LL+G P+
Sbjct: 218 STGVILYILLSGCPPF 233
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 70/225 (31%), Positives = 114/225 (50%), Gaps = 15/225 (6%)
Query: 290 DPKHLKFGSKVASGSYGDLYRG--TYCSQDVAIKVLKPERINSDMQKEFAQEVFIMRKVR 347
D + LKF ++ GS+ +Y+G T + +VA L+ ++ ++ F +E ++ ++
Sbjct: 24 DGRFLKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEXLKGLQ 83
Query: 348 HKNVVQFIGA--CTKPPSLCIV--TEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGM 403
H N+V+F + T CIV TE + G++ YL + K V K+ L + KG+
Sbjct: 84 HPNIVRFYDSWESTVKGKKCIVLVTELXTSGTLKTYLKRFK-VXKIKVLRSWCRQILKGL 142
Query: 404 NYLHQNN--IIHRDLKAANLLMDE-NEVVKVADFGVARVKAQSGVMTAETGTYRWMAPEV 460
+LH IIHRDLK N+ + VK+ D G+A +K ++ A GT + APE
Sbjct: 143 QFLHTRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLK-RASFAKAVIGTPEFXAPEX 201
Query: 461 IEHKPYDHKADVFSFGIVLWELLTGKLPYEYLTPLQAAVGVVQKV 505
E K YD DV++FG E T + PY + Q A + ++V
Sbjct: 202 YEEK-YDESVDVYAFGXCXLEXATSEYPY---SECQNAAQIYRRV 242
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 67/217 (30%), Positives = 112/217 (51%), Gaps = 9/217 (4%)
Query: 299 KVASGSYGD--LYRGTYCSQDVAIKVLKPERINSDMQK-EFAQEVFIMRKVRHKNVVQFI 355
K+ SG+YG+ L + + AIK++K + + EV +++++ H N+++
Sbjct: 28 KLGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQLDHPNIMKLY 87
Query: 356 GACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRD 415
+ +V E GG ++D + L+ F + V G YLH++NI+HRD
Sbjct: 88 EFFEDKRNYYLVMEVYRGGELFDEII-LRQKFSEVDAAVIMKQVLSGTTYLHKHNIVHRD 146
Query: 416 LKAANLLMD---ENEVVKVADFGVARVKAQSGVMTAETGTYRWMAPEVIEHKPYDHKADV 472
LK NLL++ + ++K+ DFG++ G M GT ++APEV+ K YD K DV
Sbjct: 147 LKPENLLLESKSRDALIKIVDFGLSAHFEVGGKMKERLGTAYYIAPEVL-RKKYDEKCDV 205
Query: 473 FSFGIVLWELLTGKLPYEYLTPLQAAVGVVQKVHHSF 509
+S G++L+ LL G P+ T Q + V+K SF
Sbjct: 206 WSCGVILYILLCGYPPFGGQTD-QEILKRVEKGKFSF 241
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 64/227 (28%), Positives = 111/227 (48%), Gaps = 27/227 (11%)
Query: 279 IPNDGTDVWEIDPKHLKFGSKVASGSYGDLYRGTY--CSQDVAIKVLKPERINSDMQKEF 336
+P WE+ ++ +G +G + R + + VAIK + E ++ ++ +
Sbjct: 9 LPTQTCGPWEMK-------ERLGTGGFGYVLRWIHQDTGEQVAIKQCRQE-LSPKNRERW 60
Query: 337 AQEVFIMRKVRHKNVVQFIGACTKPPSL---------CIVTEFMSGGSVYDYLHKLKGVF 387
E+ IM+K+ H NVV A P L + E+ GG + YL++ +
Sbjct: 61 CLEIQIMKKLNHPNVV---SAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCC 117
Query: 388 KLPS--LLKVAIDVSKGMNYLHQNNIIHRDLKAANLLMD---ENEVVKVADFGVARVKAQ 442
L + + D+S + YLH+N IIHRDLK N+++ + + K+ D G A+ Q
Sbjct: 118 GLKEGPIRTLLSDISSALRYLHENRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQ 177
Query: 443 SGVMTAETGTYRWMAPEVIEHKPYDHKADVFSFGIVLWELLTGKLPY 489
+ T GT +++APE++E K Y D +SFG + +E +TG P+
Sbjct: 178 GELCTEFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRPF 224
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 57/195 (29%), Positives = 105/195 (53%), Gaps = 6/195 (3%)
Query: 300 VASGSYGD--LYRGTYCSQDVAIKVLKPERI-NSDMQKEFAQEVFIMRKVRHKNVVQFIG 356
+ GS+G L T Q VA+K++ + + SDMQ +E+ +R +RH ++++
Sbjct: 22 LGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYD 81
Query: 357 ACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDL 416
+ +V E+ +G ++DY+ + + + + + Y H++ I+HRDL
Sbjct: 82 VIKSKDEIIMVIEY-AGNELFDYIVQ-RDKMSEQEARRFFQQIISAVEYCHRHKIVHRDL 139
Query: 417 KAANLLMDENEVVKVADFGVARVKAQSGVMTAETGTYRWMAPEVIEHKPYDH-KADVFSF 475
K NLL+DE+ VK+ADFG++ + + G+ + APEVI K Y + DV+S
Sbjct: 140 KPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVISGKLYAGPEVDVWSC 199
Query: 476 GIVLWELLTGKLPYE 490
G++L+ +L +LP++
Sbjct: 200 GVILYVMLCRRLPFD 214
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 57/195 (29%), Positives = 105/195 (53%), Gaps = 6/195 (3%)
Query: 300 VASGSYGD--LYRGTYCSQDVAIKVLKPERI-NSDMQKEFAQEVFIMRKVRHKNVVQFIG 356
+ GS+G L T Q VA+K++ + + SDMQ +E+ +R +RH ++++
Sbjct: 21 LGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYD 80
Query: 357 ACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDL 416
+ +V E+ +G ++DY+ + + + + + Y H++ I+HRDL
Sbjct: 81 VIKSKDEIIMVIEY-AGNELFDYIVQ-RDKMSEQEARRFFQQIISAVEYCHRHKIVHRDL 138
Query: 417 KAANLLMDENEVVKVADFGVARVKAQSGVMTAETGTYRWMAPEVIEHKPYDH-KADVFSF 475
K NLL+DE+ VK+ADFG++ + + G+ + APEVI K Y + DV+S
Sbjct: 139 KPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVISGKLYAGPEVDVWSC 198
Query: 476 GIVLWELLTGKLPYE 490
G++L+ +L +LP++
Sbjct: 199 GVILYVMLCRRLPFD 213
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 66/217 (30%), Positives = 115/217 (52%), Gaps = 23/217 (10%)
Query: 300 VASGSYGDLYRGTYC-SQDVAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQFIGAC 358
+ G +G +Y+G VA+K PE +S +EF E+ + RH ++V IG C
Sbjct: 47 IGHGVFGKVYKGVLRDGAKVALKRRTPE--SSQGIEEFETEIETLSFCRHPHLVSLIGFC 104
Query: 359 TKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSL-------LKVAIDVSKGMNYLHQNNI 411
+ + ++ ++M G++ +L+ LP++ L++ I ++G++YLH I
Sbjct: 105 DERNEMILIYKYMENGNLKRHLYG----SDLPTMSMSWEQRLEICIGAARGLHYLHTRAI 160
Query: 412 IHRDLKAANLLMDENEVVKVADFGVARVKA---QSGVMTAETGTYRWMAPEVIEHKPYDH 468
IHRD+K+ N+L+DEN V K+ DFG+++ Q+ + GT ++ PE
Sbjct: 161 IHRDVKSINILLDENFVPKITDFGISKKGTELDQTHLXXVVKGTLGYIDPEYFIKGRLTE 220
Query: 469 KADVFSFGIVLWELLTGK------LPYEYLTPLQAAV 499
K+DV+SFG+VL+E+L + LP E + + AV
Sbjct: 221 KSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAV 257
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 57/195 (29%), Positives = 105/195 (53%), Gaps = 6/195 (3%)
Query: 300 VASGSYGD--LYRGTYCSQDVAIKVLKPERI-NSDMQKEFAQEVFIMRKVRHKNVVQFIG 356
+ GS+G L T Q VA+K++ + + SDMQ +E+ +R +RH ++++
Sbjct: 16 LGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYD 75
Query: 357 ACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDL 416
+ +V E+ +G ++DY+ + + + + + Y H++ I+HRDL
Sbjct: 76 VIKSKDEIIMVIEY-AGNELFDYIVQ-RDKMSEQEARRFFQQIISAVEYCHRHKIVHRDL 133
Query: 417 KAANLLMDENEVVKVADFGVARVKAQSGVMTAETGTYRWMAPEVIEHKPYDH-KADVFSF 475
K NLL+DE+ VK+ADFG++ + + G+ + APEVI K Y + DV+S
Sbjct: 134 KPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVISGKLYAGPEVDVWSC 193
Query: 476 GIVLWELLTGKLPYE 490
G++L+ +L +LP++
Sbjct: 194 GVILYVMLCRRLPFD 208
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 64/227 (28%), Positives = 111/227 (48%), Gaps = 27/227 (11%)
Query: 279 IPNDGTDVWEIDPKHLKFGSKVASGSYGDLYRGTY--CSQDVAIKVLKPERINSDMQKEF 336
+P WE+ ++ +G +G + R + + VAIK + E ++ ++ +
Sbjct: 8 LPTQTCGPWEMK-------ERLGTGGFGYVLRWIHQDTGEQVAIKQCRQE-LSPKNRERW 59
Query: 337 AQEVFIMRKVRHKNVVQFIGACTKPPSL---------CIVTEFMSGGSVYDYLHKLKGVF 387
E+ IM+K+ H NVV A P L + E+ GG + YL++ +
Sbjct: 60 CLEIQIMKKLNHPNVV---SAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCC 116
Query: 388 KLPS--LLKVAIDVSKGMNYLHQNNIIHRDLKAANLLMD---ENEVVKVADFGVARVKAQ 442
L + + D+S + YLH+N IIHRDLK N+++ + + K+ D G A+ Q
Sbjct: 117 GLKEGPIRTLLSDISSALRYLHENRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQ 176
Query: 443 SGVMTAETGTYRWMAPEVIEHKPYDHKADVFSFGIVLWELLTGKLPY 489
+ T GT +++APE++E K Y D +SFG + +E +TG P+
Sbjct: 177 GELCTEFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRPF 223
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 113/213 (53%), Gaps = 19/213 (8%)
Query: 290 DPKHLKFGSKVASGSYGDLY-----RGTYCSQDVAIKVLKP------ERINSDMQKEFAQ 338
DP + + GS+G ++ G+ Q A+KVLK +R+ + M+++
Sbjct: 22 DPSQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERD--- 78
Query: 339 EVFIMRKVRHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAID 398
I+ +V H +V+ A L ++ +F+ GG ++ L K + +F + +
Sbjct: 79 ---ILVEVNHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSK-EVMFTEEDVKFYLAE 134
Query: 399 VSKGMNYLHQNNIIHRDLKAANLLMDENEVVKVADFGVARVKA-QSGVMTAETGTYRWMA 457
++ +++LH II+RDLK N+L+DE +K+ DFG+++ + GT +MA
Sbjct: 135 LALALDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSFCGTVEYMA 194
Query: 458 PEVIEHKPYDHKADVFSFGIVLWELLTGKLPYE 490
PEV+ + + AD +SFG++++E+LTG LP++
Sbjct: 195 PEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQ 227
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 57/195 (29%), Positives = 105/195 (53%), Gaps = 6/195 (3%)
Query: 300 VASGSYGD--LYRGTYCSQDVAIKVLKPERI-NSDMQKEFAQEVFIMRKVRHKNVVQFIG 356
+ GS+G L T Q VA+K++ + + SDMQ +E+ +R +RH ++++
Sbjct: 12 LGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYD 71
Query: 357 ACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDL 416
+ +V E+ +G ++DY+ + + + + + Y H++ I+HRDL
Sbjct: 72 VIKSKDEIIMVIEY-AGNELFDYIVQ-RDKMSEQEARRFFQQIISAVEYCHRHKIVHRDL 129
Query: 417 KAANLLMDENEVVKVADFGVARVKAQSGVMTAETGTYRWMAPEVIEHKPYDH-KADVFSF 475
K NLL+DE+ VK+ADFG++ + + G+ + APEVI K Y + DV+S
Sbjct: 130 KPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVISGKLYAGPEVDVWSC 189
Query: 476 GIVLWELLTGKLPYE 490
G++L+ +L +LP++
Sbjct: 190 GVILYVMLCRRLPFD 204
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 96.3 bits (238), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 113/213 (53%), Gaps = 19/213 (8%)
Query: 290 DPKHLKFGSKVASGSYGDLY-----RGTYCSQDVAIKVLKP------ERINSDMQKEFAQ 338
DP + + GS+G ++ G+ Q A+KVLK +R+ + M+++
Sbjct: 22 DPSQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERD--- 78
Query: 339 EVFIMRKVRHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAID 398
I+ +V H +V+ A L ++ +F+ GG ++ L K + +F + +
Sbjct: 79 ---ILVEVNHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSK-EVMFTEEDVKFYLAE 134
Query: 399 VSKGMNYLHQNNIIHRDLKAANLLMDENEVVKVADFGVARVKA-QSGVMTAETGTYRWMA 457
++ +++LH II+RDLK N+L+DE +K+ DFG+++ + GT +MA
Sbjct: 135 LALALDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSFCGTVEYMA 194
Query: 458 PEVIEHKPYDHKADVFSFGIVLWELLTGKLPYE 490
PEV+ + + AD +SFG++++E+LTG LP++
Sbjct: 195 PEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQ 227
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 96.3 bits (238), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 113/213 (53%), Gaps = 19/213 (8%)
Query: 290 DPKHLKFGSKVASGSYGDLY-----RGTYCSQDVAIKVLKP------ERINSDMQKEFAQ 338
DP + + GS+G ++ G+ Q A+KVLK +R+ + M+++
Sbjct: 23 DPSQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERD--- 79
Query: 339 EVFIMRKVRHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAID 398
I+ +V H +V+ A L ++ +F+ GG ++ L K + +F + +
Sbjct: 80 ---ILVEVNHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSK-EVMFTEEDVKFYLAE 135
Query: 399 VSKGMNYLHQNNIIHRDLKAANLLMDENEVVKVADFGVARVKA-QSGVMTAETGTYRWMA 457
++ +++LH II+RDLK N+L+DE +K+ DFG+++ + GT +MA
Sbjct: 136 LALALDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSFCGTVEYMA 195
Query: 458 PEVIEHKPYDHKADVFSFGIVLWELLTGKLPYE 490
PEV+ + + AD +SFG++++E+LTG LP++
Sbjct: 196 PEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQ 228
>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6
pdb|3UDB|B Chain B, Crystal Structure Of Snrk2.6
pdb|3UDB|C Chain C, Crystal Structure Of Snrk2.6
pdb|3UDB|D Chain D, Crystal Structure Of Snrk2.6
pdb|3UDB|E Chain E, Crystal Structure Of Snrk2.6
pdb|3UDB|F Chain F, Crystal Structure Of Snrk2.6
Length = 317
Score = 96.3 bits (238), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 62/197 (31%), Positives = 104/197 (52%), Gaps = 11/197 (5%)
Query: 300 VASGSYG--DLYRGTYCSQDVAIKVL-KPERINSDMQKEFAQEVFIMRKVRHKNVVQFIG 356
+ +G++G L R ++ VA+K + + E+I+ ++++E R +RH N+V+F
Sbjct: 27 IGAGNFGVARLMRDKQANELVAVKYIERGEKIDENVKREIINH----RSLRHPNIVRFKE 82
Query: 357 ACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDL 416
P L IV E+ SGG +++ + G F + G++Y H + HRDL
Sbjct: 83 VILTPTHLAIVMEYASGGELFERICN-AGRFSEDEARFFFQQLISGVSYAHAMQVAHRDL 141
Query: 417 KAANLLMDENEV--VKVADFGVARVKAQSGVMTAETGTYRWMAPEVIEHKPYDHK-ADVF 473
K N L+D + +K+ADFG ++ + GT ++APEV+ K YD K ADV+
Sbjct: 142 KLENTLLDGSPAPRLKIADFGYSKASVLHSQPKSAVGTPAYIAPEVLLKKEYDGKVADVW 201
Query: 474 SFGIVLWELLTGKLPYE 490
S G+ L+ +L G P+E
Sbjct: 202 SCGVTLYVMLVGAYPFE 218
>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3
Length = 361
Score = 95.9 bits (237), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 64/207 (30%), Positives = 102/207 (49%), Gaps = 11/207 (5%)
Query: 290 DPKHLKFGSKVASGSYG--DLYRGTYCSQDVAIKVL-KPERINSDMQKEFAQEVFIMRKV 346
D F + SG++G L R + VA+K + + I+ ++Q+E R +
Sbjct: 18 DSDRYDFVKDIGSGNFGVARLMRDKLTKELVAVKYIERGAAIDENVQREIINH----RSL 73
Query: 347 RHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYL 406
RH N+V+F P L I+ E+ SGG +Y+ + G F + G++Y
Sbjct: 74 RHPNIVRFKEVILTPTHLAIIMEYASGGELYERICN-AGRFSEDEARFFFQQLLSGVSYC 132
Query: 407 HQNNIIHRDLKAANLLMDENEV--VKVADFGVARVKAQSGVMTAETGTYRWMAPEVIEHK 464
H I HRDLK N L+D + +K+ DFG ++ + GT ++APEV+ +
Sbjct: 133 HSMQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLLRQ 192
Query: 465 PYDHK-ADVFSFGIVLWELLTGKLPYE 490
YD K ADV+S G+ L+ +L G P+E
Sbjct: 193 EYDGKIADVWSCGVTLYVMLVGAYPFE 219
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 95.5 bits (236), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 51/175 (29%), Positives = 94/175 (53%), Gaps = 5/175 (2%)
Query: 318 VAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQFIGACTKPPSLCIVTEFMSGGSVY 377
VAIK + + + + E+ ++ K++H N+V L ++ + +SGG ++
Sbjct: 46 VAIKCIAKKALEGK-EGSMENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELF 104
Query: 378 DYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDLKAANLL---MDENEVVKVADF 434
D + + KG + ++ V + YLH I+HRDLK NLL +DE+ + ++DF
Sbjct: 105 DRIVE-KGFYTERDASRLIFQVLDAVKYLHDLGIVHRDLKPENLLYYSLDEDSKIMISDF 163
Query: 435 GVARVKAQSGVMTAETGTYRWMAPEVIEHKPYDHKADVFSFGIVLWELLTGKLPY 489
G+++++ V++ GT ++APEV+ KPY D +S G++ + LL G P+
Sbjct: 164 GLSKMEDPGSVLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPF 218
>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 361
Score = 95.5 bits (236), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 62/197 (31%), Positives = 103/197 (52%), Gaps = 11/197 (5%)
Query: 300 VASGSYG--DLYRGTYCSQDVAIKVL-KPERINSDMQKEFAQEVFIMRKVRHKNVVQFIG 356
+ SG++G L R ++ VA+K + + E+I+ ++++E R +RH N+V+F
Sbjct: 26 IGSGNFGVARLMRDKQSNELVAVKYIERGEKIDENVKREIINH----RSLRHPNIVRFKE 81
Query: 357 ACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDL 416
P L IV E+ SGG +++ + G F + G++Y H + HRDL
Sbjct: 82 VILTPTHLAIVMEYASGGELFERICN-AGRFSEDEARFFFQQLISGVSYCHAMQVCHRDL 140
Query: 417 KAANLLMDENEV--VKVADFGVARVKAQSGVMTAETGTYRWMAPEVIEHKPYDHK-ADVF 473
K N L+D + +K+ DFG ++ + GT ++APEV+ K YD K ADV+
Sbjct: 141 KLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLLKKEYDGKVADVW 200
Query: 474 SFGIVLWELLTGKLPYE 490
S G+ L+ +L G P+E
Sbjct: 201 SCGVTLYVMLVGAYPFE 217
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 95.1 bits (235), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 56/195 (28%), Positives = 104/195 (53%), Gaps = 9/195 (4%)
Query: 300 VASGSYGDLYRGTYCSQDVAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQFIGACT 359
+ GSY R + + ++ V ++ D +E ++R +H N++
Sbjct: 30 IGVGSYSVCKRCIHKATNMEFAVKIIDKSKRDPTEEIE---ILLRYGQHPNIITLKDVYD 86
Query: 360 KPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDLKAA 419
+ +VTE M GG + D + + K F V ++K + YLH ++HRDLK +
Sbjct: 87 DGKYVYVVTELMKGGELLDKILRQK-FFSEREASAVLFTITKTVEYLHAQGVVHRDLKPS 145
Query: 420 NLL-MDEN---EVVKVADFGVAR-VKAQSGVMTAETGTYRWMAPEVIEHKPYDHKADVFS 474
N+L +DE+ E +++ DFG A+ ++A++G++ T ++APEV+E + YD D++S
Sbjct: 146 NILYVDESGNPESIRICDFGFAKQLRAENGLLMTPCYTANFVAPEVLERQGYDAACDIWS 205
Query: 475 FGIVLWELLTGKLPY 489
G++L+ +LTG P+
Sbjct: 206 LGVLLYTMLTGYTPF 220
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 95.1 bits (235), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 62/232 (26%), Positives = 120/232 (51%), Gaps = 16/232 (6%)
Query: 293 HLKFGSKVASGSYGDLY--RGTYCSQDVAIKVLKPERINSDMQ----KEFAQEVFIMRKV 346
H + G ++ SG + + R ++ A K +K R++S + +E +EV I+R++
Sbjct: 13 HYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREI 72
Query: 347 RHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFK--LPSLLKVAIDVSKGMN 404
RH N++ + ++ E +SGG ++D+L + + + + LK +D G++
Sbjct: 73 RHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEATQFLKQILD---GVH 129
Query: 405 YLHQNNIIHRDLKAANLLMDENEV----VKVADFGVARVKAQSGVMTAETGTYRWMAPEV 460
YLH I H DLK N+++ + V +K+ DFG+A GT ++APE+
Sbjct: 130 YLHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKNIFGTPEFVAPEI 189
Query: 461 IEHKPYDHKADVFSFGIVLWELLTGKLPYEYLTPLQAAVGVVQKVHHSFLEQ 512
+ ++P +AD++S G++ + LL+G P+ T Q + + V++ F E+
Sbjct: 190 VNYEPLGLEADMWSIGVITYILLSGASPFLGETK-QETLTNISAVNYDFDEE 240
>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6
pdb|3UC4|B Chain B, The Crystal Structure Of Snf1-Related Kinase 2.6
Length = 362
Score = 95.1 bits (235), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 62/197 (31%), Positives = 103/197 (52%), Gaps = 11/197 (5%)
Query: 300 VASGSYG--DLYRGTYCSQDVAIKVL-KPERINSDMQKEFAQEVFIMRKVRHKNVVQFIG 356
+ SG++G L R ++ VA+K + + E+I +++++E R +RH N+V+F
Sbjct: 27 IGSGNFGVARLMRDKQSNELVAVKYIERGEKIAANVKREIINH----RSLRHPNIVRFKE 82
Query: 357 ACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDL 416
P L IV E+ SGG +++ + G F + G++Y H + HRDL
Sbjct: 83 VILTPTHLAIVMEYASGGELFERICN-AGRFSEDEARFFFQQLISGVSYCHAMQVCHRDL 141
Query: 417 KAANLLMDENEV--VKVADFGVARVKAQSGVMTAETGTYRWMAPEVIEHKPYDHK-ADVF 473
K N L+D + +K+ DFG ++ + GT ++APEV+ K YD K ADV+
Sbjct: 142 KLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLLKKEYDGKVADVW 201
Query: 474 SFGIVLWELLTGKLPYE 490
S G+ L+ +L G P+E
Sbjct: 202 SCGVTLYVMLVGAYPFE 218
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 95.1 bits (235), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 62/232 (26%), Positives = 120/232 (51%), Gaps = 16/232 (6%)
Query: 293 HLKFGSKVASGSYGDLY--RGTYCSQDVAIKVLKPERINSDMQ----KEFAQEVFIMRKV 346
H + G ++ SG + + R ++ A K +K R++S + +E +EV I+R++
Sbjct: 6 HYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREI 65
Query: 347 RHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFK--LPSLLKVAIDVSKGMN 404
RH N++ + ++ E +SGG ++D+L + + + + LK +D G++
Sbjct: 66 RHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEATQFLKQILD---GVH 122
Query: 405 YLHQNNIIHRDLKAANLLMDENEV----VKVADFGVARVKAQSGVMTAETGTYRWMAPEV 460
YLH I H DLK N+++ + V +K+ DFG+A GT ++APE+
Sbjct: 123 YLHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKNIFGTPEFVAPEI 182
Query: 461 IEHKPYDHKADVFSFGIVLWELLTGKLPYEYLTPLQAAVGVVQKVHHSFLEQ 512
+ ++P +AD++S G++ + LL+G P+ T Q + + V++ F E+
Sbjct: 183 VNYEPLGLEADMWSIGVITYILLSGASPFLGETK-QETLTNISAVNYDFDEE 233
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 56/198 (28%), Positives = 108/198 (54%), Gaps = 10/198 (5%)
Query: 300 VASGSYGDLY----RGTYCSQDVAIKVLKPERI--NSDMQKEFAQEVFIMRKVRHKNVVQ 353
+ GS+G + +GT + A+K+LK + + + D++ ++ + + + Q
Sbjct: 349 LGKGSFGKVMLSERKGT--DELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQ 406
Query: 354 FIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIH 413
L V E+++GG + ++ ++ G FK P + A +++ G+ +L II+
Sbjct: 407 LHSCFQTMDRLYFVMEYVNGGDLMYHIQQV-GRFKEPHAVFYAAEIAIGLFFLQSKGIIY 465
Query: 414 RDLKAANLLMDENEVVKVADFGVARVKAQSGVMTAE-TGTYRWMAPEVIEHKPYDHKADV 472
RDLK N+++D +K+ADFG+ + GV T GT ++APE+I ++PY D
Sbjct: 466 RDLKLDNVMLDSEGHIKIADFGMCKENIWDGVTTKXFCGTPDYIAPEIIAYQPYGKSVDW 525
Query: 473 FSFGIVLWELLTGKLPYE 490
++FG++L+E+L G+ P+E
Sbjct: 526 WAFGVLLYEMLAGQAPFE 543
>pdb|3H9R|A Chain A, Crystal Structure Of The Kinase Domain Of Type I Activin
Receptor (Acvr1) In Complex With Fkbp12 And Dorsomorphin
Length = 330
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 62/207 (29%), Positives = 110/207 (53%), Gaps = 30/207 (14%)
Query: 300 VASGSYGDLYRGTYCSQDVAIKVLKPERINSDMQKEFAQ-EVFIMRKVRHKNVVQFIGAC 358
V G YG+++RG++ ++VA+K+ + D + F + E++ +RH+N++ FI +
Sbjct: 45 VGKGRYGEVWRGSWQGENVAVKIFS----SRDEKSWFRETELYNTVMLRHENILGFIASD 100
Query: 359 T----KPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLH------- 407
L ++T + GS+YDYL S L++ + ++ G+ +LH
Sbjct: 101 MTSRHSSTQLWLITHYHEMGSLYDYLQLT--TLDTVSCLRIVLSIASGLAHLHIEIFGTQ 158
Query: 408 -QNNIIHRDLKAANLLMDENEVVKVADFGVARVKAQSGVM-----TAETGTYRWMAPEV- 460
+ I HRDLK+ N+L+ +N +AD G+A + +QS GT R+MAPEV
Sbjct: 159 GKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYMAPEVL 218
Query: 461 ---IEHKPYD--HKADVFSFGIVLWEL 482
I+ +D + D+++FG+VLWE+
Sbjct: 219 DETIQVDCFDSYKRVDIWAFGLVLWEV 245
>pdb|4DYM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00135
Length = 301
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 62/207 (29%), Positives = 110/207 (53%), Gaps = 30/207 (14%)
Query: 300 VASGSYGDLYRGTYCSQDVAIKVLKPERINSDMQKEFAQ-EVFIMRKVRHKNVVQFIGAC 358
V G YG+++RG++ ++VA+K+ + D + F + E++ +RH+N++ FI +
Sbjct: 16 VGKGRYGEVWRGSWQGENVAVKIFS----SRDEKSWFRETELYNTVMLRHENILGFIASD 71
Query: 359 T----KPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLH------- 407
L ++T + GS+YDYL S L++ + ++ G+ +LH
Sbjct: 72 MTSRHSSTQLWLITHYHEMGSLYDYLQL--TTLDTVSCLRIVLSIASGLAHLHIEIFGTQ 129
Query: 408 -QNNIIHRDLKAANLLMDENEVVKVADFGVARVKAQSGVM-----TAETGTYRWMAPEV- 460
+ I HRDLK+ N+L+ +N +AD G+A + +QS GT R+MAPEV
Sbjct: 130 GKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYMAPEVL 189
Query: 461 ---IEHKPYD--HKADVFSFGIVLWEL 482
I+ +D + D+++FG+VLWE+
Sbjct: 190 DETIQVDCFDSYKRVDIWAFGLVLWEV 216
>pdb|3MTF|A Chain A, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3MTF|B Chain B, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3OOM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00507
pdb|3Q4U|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|B Chain B, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|C Chain C, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|D Chain D, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
Length = 301
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 62/207 (29%), Positives = 110/207 (53%), Gaps = 30/207 (14%)
Query: 300 VASGSYGDLYRGTYCSQDVAIKVLKPERINSDMQKEFAQ-EVFIMRKVRHKNVVQFIGAC 358
V G YG+++RG++ ++VA+K+ + D + F + E++ +RH+N++ FI +
Sbjct: 16 VGKGRYGEVWRGSWQGENVAVKIFS----SRDEKSWFRETELYNTVMLRHENILGFIASD 71
Query: 359 T----KPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLH------- 407
L ++T + GS+YDYL S L++ + ++ G+ +LH
Sbjct: 72 MTSRHSSTQLWLITHYHEMGSLYDYLQL--TTLDTVSCLRIVLSIASGLAHLHIEIFGTQ 129
Query: 408 -QNNIIHRDLKAANLLMDENEVVKVADFGVARVKAQSGVM-----TAETGTYRWMAPEV- 460
+ I HRDLK+ N+L+ +N +AD G+A + +QS GT R+MAPEV
Sbjct: 130 GKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYMAPEVL 189
Query: 461 ---IEHKPYD--HKADVFSFGIVLWEL 482
I+ +D + D+++FG+VLWE+
Sbjct: 190 DETIQVDCFDSYKRVDIWAFGLVLWEV 216
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 62/231 (26%), Positives = 112/231 (48%), Gaps = 31/231 (13%)
Query: 288 EIDPKHLKFGSKVASGSYGDLYRGTY-------CSQDVAIKVLKPERINSDMQKEFAQEV 340
E+ + + ++ GS+G +Y G VA+K + E + + EF E
Sbjct: 12 EVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVN-ESASLRERIEFLNEA 70
Query: 341 FIMRKVRHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFK---------LPS 391
+M+ +VV+ +G +K +V E M+ G + YL L+ + L
Sbjct: 71 SVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQE 130
Query: 392 LLKVAIDVSKGMNYLHQNNIIHRDLKAANLLMDENEVVKVADFGVAR--------VKAQS 443
++++A +++ GM YL+ +HRDL A N ++ + VK+ DFG+ R K
Sbjct: 131 MIQMAAEIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGK 190
Query: 444 GVMTAETGTYRWMAPEVIEHKPYDHKADVFSFGIVLWELLT-GKLPYEYLT 493
G++ RWMAPE ++ + +D++SFG+VLWE+ + + PY+ L+
Sbjct: 191 GLLPV-----RWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLS 236
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 107/204 (52%), Gaps = 6/204 (2%)
Query: 291 PKHLKFGSKVASGSYGDLYRGTYCSQDV--AIKVLKPERINSDMQKE--FAQEVFIMRKV 346
P F + GS+G + + +++V A+KVL+ + I +++ ++ +++ V
Sbjct: 37 PSDFHFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNV 96
Query: 347 RHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYL 406
+H +V + L V ++++GG ++ +L + + F P A +++ + YL
Sbjct: 97 KHPFLVGLHFSFQTADKLYFVLDYINGGELFYHLQRER-CFLEPRARFYAAEIASALGYL 155
Query: 407 HQNNIIHRDLKAANLLMDENEVVKVADFGVARVKAQSGVMTAE-TGTYRWMAPEVIEHKP 465
H NI++RDLK N+L+D + + DFG+ + + T+ GT ++APEV+ +P
Sbjct: 156 HSLNIVYRDLKPENILLDSQGHIVLTDFGLCKENIEHNSTTSTFCGTPEYLAPEVLHKQP 215
Query: 466 YDHKADVFSFGIVLWELLTGKLPY 489
YD D + G VL+E+L G P+
Sbjct: 216 YDRTVDWWCLGAVLYEMLYGLPPF 239
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 62/232 (26%), Positives = 119/232 (51%), Gaps = 16/232 (6%)
Query: 293 HLKFGSKVASGSYGDLY--RGTYCSQDVAIKVLKPERINSDMQ----KEFAQEVFIMRKV 346
H + G ++ SG + + R ++ A K +K R+ S + +E +EV I+R++
Sbjct: 27 HYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLXSSRRGVSREEIEREVNILREI 86
Query: 347 RHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFK--LPSLLKVAIDVSKGMN 404
RH N++ + ++ E +SGG ++D+L + + + + LK +D G++
Sbjct: 87 RHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEATQFLKQILD---GVH 143
Query: 405 YLHQNNIIHRDLKAANLLMDENEV----VKVADFGVARVKAQSGVMTAETGTYRWMAPEV 460
YLH I H DLK N+++ + V +K+ DFG+A GT ++APE+
Sbjct: 144 YLHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKNIFGTPEFVAPEI 203
Query: 461 IEHKPYDHKADVFSFGIVLWELLTGKLPYEYLTPLQAAVGVVQKVHHSFLEQ 512
+ ++P +AD++S G++ + LL+G P+ T Q + + V++ F E+
Sbjct: 204 VNYEPLGLEADMWSIGVITYILLSGASPFLGETK-QETLTNISAVNYDFDEE 254
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 58/196 (29%), Positives = 104/196 (53%), Gaps = 8/196 (4%)
Query: 300 VASGSYGD--LYRGTYCSQDVAIKVLKPERINSDMQKE-FAQEVFIMRKVRHKNVVQFIG 356
+ GS+G+ L + Q+ A+KV+ ++ KE +EV +++++ H N+ +
Sbjct: 34 LGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIXKLYE 93
Query: 357 ACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDL 416
+V E +GG ++D + K F ++ V G+ Y H+N I+HRDL
Sbjct: 94 FFEDKGYFYLVGEVYTGGELFDEIISRKR-FSEVDAARIIRQVLSGITYXHKNKIVHRDL 152
Query: 417 KAANLLMD---ENEVVKVADFGVARVKAQSGVMTAETGTYRWMAPEVIEHKPYDHKADVF 473
K NLL++ ++ +++ DFG++ S + GT ++APEV+ H YD K DV+
Sbjct: 153 KPENLLLESKSKDANIRIIDFGLSTHFEASKKXKDKIGTAYYIAPEVL-HGTYDEKCDVW 211
Query: 474 SFGIVLWELLTGKLPY 489
S G++L+ LL+G P+
Sbjct: 212 STGVILYILLSGCPPF 227
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 55/196 (28%), Positives = 105/196 (53%), Gaps = 6/196 (3%)
Query: 300 VASGSYGDLYRGTYCSQD--VAIKVLKPERI--NSDMQKEFAQEVFIMRKVRHKNVVQFI 355
+ GS+G + D A+K+LK + + + D++ ++ + + + Q
Sbjct: 28 LGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLH 87
Query: 356 GACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRD 415
L V E+++GG + ++ ++ G FK P + A +++ G+ +L II+RD
Sbjct: 88 SCFQTMDRLYFVMEYVNGGDLMYHIQQV-GRFKEPHAVFYAAEIAIGLFFLQSKGIIYRD 146
Query: 416 LKAANLLMDENEVVKVADFGVARVKAQSGVMTAE-TGTYRWMAPEVIEHKPYDHKADVFS 474
LK N+++D +K+ADFG+ + GV T GT ++APE+I ++PY D ++
Sbjct: 147 LKLDNVMLDSEGHIKIADFGMCKENIWDGVTTKXFCGTPDYIAPEIIAYQPYGKSVDWWA 206
Query: 475 FGIVLWELLTGKLPYE 490
FG++L+E+L G+ P+E
Sbjct: 207 FGVLLYEMLAGQAPFE 222
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 53/194 (27%), Positives = 99/194 (51%), Gaps = 5/194 (2%)
Query: 300 VASGSYGD--LYRGTYCSQDVAIKVLKPERINS-DMQKEFAQEVFIMRKVRHKNVVQFIG 356
+ G++G L R + A+K+L+ E I + D E +++ RH +
Sbjct: 16 LGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKY 75
Query: 357 ACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDL 416
A LC V E+ +GG ++ +L + + VF ++ + YLH ++++RD+
Sbjct: 76 AFQTHDRLCFVMEYANGGELFFHLSRER-VFTEERARFYGAEIVSALEYLHSRDVVYRDI 134
Query: 417 KAANLLMDENEVVKVADFGVARVKAQSG-VMTAETGTYRWMAPEVIEHKPYDHKADVFSF 475
K NL++D++ +K+ DFG+ + G M GT ++APEV+E Y D +
Sbjct: 135 KLENLMLDKDGHIKITDFGLCKEGISDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGL 194
Query: 476 GIVLWELLTGKLPY 489
G+V++E++ G+LP+
Sbjct: 195 GVVMYEMMCGRLPF 208
>pdb|3MDY|A Chain A, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
pdb|3MDY|C Chain C, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
Length = 337
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 71/232 (30%), Positives = 114/232 (49%), Gaps = 36/232 (15%)
Query: 292 KHLKFGSKVASGSYGDLYRGTYCSQDVAIKVL-KPERINSDMQKEFAQEVFIMRKVRHKN 350
K ++ ++ G YG+++ G + + VA+KV E + + E Q V + RH+N
Sbjct: 37 KQIQMVKQIGKGRYGEVWMGKWRGEKVAVKVFFTTEEASWFRETEIYQTVLM----RHEN 92
Query: 351 VVQFIGACTKPPS----LCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYL 406
++ FI A K L ++T++ GS+YDYL S+LK+A G+ +L
Sbjct: 93 ILGFIAADIKGTGSWTQLYLITDYHENGSLYDYLKST--TLDAKSMLKLAYSSVSGLCHL 150
Query: 407 HQN--------NIIHRDLKAANLLMDENEVVKVADFGVARVKAQSGVMTAE------TGT 452
H I HRDLK+ N+L+ +N +AD G+A VK S + GT
Sbjct: 151 HTEIFSTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA-VKFISDTNEVDIPPNTRVGT 209
Query: 453 YRWMAPEVIE------HKPYDHKADVFSFGIVLWEL----LTGKLPYEYLTP 494
R+M PEV++ H AD++SFG++LWE+ ++G + EY P
Sbjct: 210 KRYMPPEVLDESLNRNHFQSYIMADMYSFGLILWEVARRCVSGGIVEEYQLP 261
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 60/197 (30%), Positives = 109/197 (55%), Gaps = 8/197 (4%)
Query: 300 VASGSYGD--LYRGTYCSQDVAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQFIGA 357
+ G+YG+ L + VA+K++ +R D + +E+ I + + H+NVV+F G
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRA-VDCPENIKKEICINKMLNHENVVKFYGH 72
Query: 358 CTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDLK 417
+ + E+ SGG ++D + G+ + P + + G+ YLH I HRD+K
Sbjct: 73 RREGNIQYLFLEYCSGGELFDRIEPDIGMPE-PDAQRFFHQLMAGVVYLHGIGITHRDIK 131
Query: 418 AANLLMDENEVVKVADFGVA---RVKAQSGVMTAETGTYRWMAPEVIEHKPYDHK-ADVF 473
NLL+DE + +K++DFG+A R + ++ GT ++APE+++ + + + DV+
Sbjct: 132 PENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVW 191
Query: 474 SFGIVLWELLTGKLPYE 490
S GIVL +L G+LP++
Sbjct: 192 SCGIVLTAMLAGELPWD 208
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 53/194 (27%), Positives = 99/194 (51%), Gaps = 5/194 (2%)
Query: 300 VASGSYGD--LYRGTYCSQDVAIKVLKPERINS-DMQKEFAQEVFIMRKVRHKNVVQFIG 356
+ G++G L R + A+K+L+ E I + D E +++ RH +
Sbjct: 13 LGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKY 72
Query: 357 ACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDL 416
A LC V E+ +GG ++ +L + + VF ++ + YLH ++++RD+
Sbjct: 73 AFQTHDRLCFVMEYANGGELFFHLSRER-VFTEERARFYGAEIVSALEYLHSRDVVYRDI 131
Query: 417 KAANLLMDENEVVKVADFGVARVKAQSG-VMTAETGTYRWMAPEVIEHKPYDHKADVFSF 475
K NL++D++ +K+ DFG+ + G M GT ++APEV+E Y D +
Sbjct: 132 KLENLMLDKDGHIKITDFGLCKEGISDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGL 191
Query: 476 GIVLWELLTGKLPY 489
G+V++E++ G+LP+
Sbjct: 192 GVVMYEMMCGRLPF 205
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 60/197 (30%), Positives = 109/197 (55%), Gaps = 8/197 (4%)
Query: 300 VASGSYGD--LYRGTYCSQDVAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQFIGA 357
+ G+YG+ L + VA+K++ +R D + +E+ I + + H+NVV+F G
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRA-VDCPENIKKEICINKMLNHENVVKFYGH 73
Query: 358 CTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDLK 417
+ + E+ SGG ++D + G+ + P + + G+ YLH I HRD+K
Sbjct: 74 RREGNIQYLFLEYCSGGELFDRIEPDIGMPE-PDAQRFFHQLMAGVVYLHGIGITHRDIK 132
Query: 418 AANLLMDENEVVKVADFGVA---RVKAQSGVMTAETGTYRWMAPEVIEHKPYDHK-ADVF 473
NLL+DE + +K++DFG+A R + ++ GT ++APE+++ + + + DV+
Sbjct: 133 PENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVW 192
Query: 474 SFGIVLWELLTGKLPYE 490
S GIVL +L G+LP++
Sbjct: 193 SCGIVLTAMLAGELPWD 209
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 53/194 (27%), Positives = 99/194 (51%), Gaps = 5/194 (2%)
Query: 300 VASGSYGD--LYRGTYCSQDVAIKVLKPERINS-DMQKEFAQEVFIMRKVRHKNVVQFIG 356
+ G++G L R + A+K+L+ E I + D E +++ RH +
Sbjct: 13 LGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKY 72
Query: 357 ACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDL 416
A LC V E+ +GG ++ +L + + VF ++ + YLH ++++RD+
Sbjct: 73 AFQTHDRLCFVMEYANGGELFFHLSRER-VFTEERARFYGAEIVSALEYLHSRDVVYRDI 131
Query: 417 KAANLLMDENEVVKVADFGVARVKAQSG-VMTAETGTYRWMAPEVIEHKPYDHKADVFSF 475
K NL++D++ +K+ DFG+ + G M GT ++APEV+E Y D +
Sbjct: 132 KLENLMLDKDGHIKITDFGLCKEGISDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGL 191
Query: 476 GIVLWELLTGKLPY 489
G+V++E++ G+LP+
Sbjct: 192 GVVMYEMMCGRLPF 205
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 53/194 (27%), Positives = 99/194 (51%), Gaps = 5/194 (2%)
Query: 300 VASGSYGD--LYRGTYCSQDVAIKVLKPERINS-DMQKEFAQEVFIMRKVRHKNVVQFIG 356
+ G++G L R + A+K+L+ E I + D E +++ RH +
Sbjct: 18 LGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKY 77
Query: 357 ACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDL 416
A LC V E+ +GG ++ +L + + VF ++ + YLH ++++RD+
Sbjct: 78 AFQTHDRLCFVMEYANGGELFFHLSRER-VFTEERARFYGAEIVSALEYLHSRDVVYRDI 136
Query: 417 KAANLLMDENEVVKVADFGVARVKAQSG-VMTAETGTYRWMAPEVIEHKPYDHKADVFSF 475
K NL++D++ +K+ DFG+ + G M GT ++APEV+E Y D +
Sbjct: 137 KLENLMLDKDGHIKITDFGLCKEGISDGATMKXFCGTPEYLAPEVLEDNDYGRAVDWWGL 196
Query: 476 GIVLWELLTGKLPY 489
G+V++E++ G+LP+
Sbjct: 197 GVVMYEMMCGRLPF 210
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 70/265 (26%), Positives = 130/265 (49%), Gaps = 16/265 (6%)
Query: 232 EETEQLRAALEKEVLKLERQGWPS--HRSSSPTSEPEDTGMKSHPYHLKIPNDGTDVWEI 289
EE E+ A++ L++Q RS SP+ +++G + L P + E
Sbjct: 94 EEREEWTTAIQTVADGLKKQAAAEMDFRSGSPS---DNSGAEEMEVSLAKPKHRVTMNEF 150
Query: 290 DPKHLKFGSKVASGSYGD--LYRGTYCSQDVAIKVLKPERI-NSDMQKEFAQEVFIMRKV 346
+ +LK + G++G L + + A+K+LK E I D E +++
Sbjct: 151 E--YLKL---LGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNS 205
Query: 347 RHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYL 406
RH + + LC V E+ +GG ++ +L + + VF ++ ++YL
Sbjct: 206 RHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRER-VFSEDRARFYGAEIVSALDYL 264
Query: 407 H-QNNIIHRDLKAANLLMDENEVVKVADFGVARVKAQSG-VMTAETGTYRWMAPEVIEHK 464
H + N+++RDLK NL++D++ +K+ DFG+ + + G M GT ++APEV+E
Sbjct: 265 HSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKTFCGTPEYLAPEVLEDN 324
Query: 465 PYDHKADVFSFGIVLWELLTGKLPY 489
Y D + G+V++E++ G+LP+
Sbjct: 325 DYGRAVDWWGLGVVMYEMMCGRLPF 349
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 53/194 (27%), Positives = 98/194 (50%), Gaps = 5/194 (2%)
Query: 300 VASGSYGD--LYRGTYCSQDVAIKVLKPERI-NSDMQKEFAQEVFIMRKVRHKNVVQFIG 356
+ G++G L R + A+K+L+ E I D E +++ RH +
Sbjct: 13 LGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKY 72
Query: 357 ACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDL 416
A LC V E+ +GG ++ +L + + VF ++ + YLH ++++RD+
Sbjct: 73 AFQTHDRLCFVMEYANGGELFFHLSRER-VFTEERARFYGAEIVSALEYLHSRDVVYRDI 131
Query: 417 KAANLLMDENEVVKVADFGVARVKAQSG-VMTAETGTYRWMAPEVIEHKPYDHKADVFSF 475
K NL++D++ +K+ DFG+ + G M GT ++APEV+E Y D +
Sbjct: 132 KLENLMLDKDGHIKITDFGLCKEGISDGATMKXFCGTPEYLAPEVLEDNDYGRAVDWWGL 191
Query: 476 GIVLWELLTGKLPY 489
G+V++E++ G+LP+
Sbjct: 192 GVVMYEMMCGRLPF 205
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 53/194 (27%), Positives = 99/194 (51%), Gaps = 5/194 (2%)
Query: 300 VASGSYGD--LYRGTYCSQDVAIKVLKPERINS-DMQKEFAQEVFIMRKVRHKNVVQFIG 356
+ G++G L R + A+K+L+ E I + D E +++ RH +
Sbjct: 13 LGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKY 72
Query: 357 ACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDL 416
A LC V E+ +GG ++ +L + + VF ++ + YLH ++++RD+
Sbjct: 73 AFQTHDRLCFVMEYANGGELFFHLSRER-VFTEERARFYGAEIVSALEYLHSRDVVYRDI 131
Query: 417 KAANLLMDENEVVKVADFGVARVKAQSG-VMTAETGTYRWMAPEVIEHKPYDHKADVFSF 475
K NL++D++ +K+ DFG+ + G M GT ++APEV+E Y D +
Sbjct: 132 KLENLMLDKDGHIKITDFGLCKEGISDGATMKXFCGTPEYLAPEVLEDNDYGRAVDWWGL 191
Query: 476 GIVLWELLTGKLPY 489
G+V++E++ G+LP+
Sbjct: 192 GVVMYEMMCGRLPF 205
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 60/197 (30%), Positives = 109/197 (55%), Gaps = 8/197 (4%)
Query: 300 VASGSYGD--LYRGTYCSQDVAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQFIGA 357
+ G+YG+ L + VA+K++ +R D + +E+ I + + H+NVV+F G
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRA-VDCPENIKKEICINKMLNHENVVKFYGH 73
Query: 358 CTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDLK 417
+ + E+ SGG ++D + G+ + P + + G+ YLH I HRD+K
Sbjct: 74 RREGNIQYLFLEYCSGGELFDRIEPDIGMPE-PDAQRFFHQLMAGVVYLHGIGITHRDIK 132
Query: 418 AANLLMDENEVVKVADFGVA---RVKAQSGVMTAETGTYRWMAPEVIEHKPYDHK-ADVF 473
NLL+DE + +K++DFG+A R + ++ GT ++APE+++ + + + DV+
Sbjct: 133 PENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVW 192
Query: 474 SFGIVLWELLTGKLPYE 490
S GIVL +L G+LP++
Sbjct: 193 SCGIVLTAMLAGELPWD 209
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 60/197 (30%), Positives = 109/197 (55%), Gaps = 8/197 (4%)
Query: 300 VASGSYGD--LYRGTYCSQDVAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQFIGA 357
+ G+YG+ L + VA+K++ +R D + +E+ I + + H+NVV+F G
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRA-VDCPENIKKEICINKMLNHENVVKFYGH 73
Query: 358 CTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDLK 417
+ + E+ SGG ++D + G+ + P + + G+ YLH I HRD+K
Sbjct: 74 RREGNIQYLFLEYCSGGELFDRIEPDIGMPE-PDAQRFFHQLMAGVVYLHGIGITHRDIK 132
Query: 418 AANLLMDENEVVKVADFGVA---RVKAQSGVMTAETGTYRWMAPEVIEHKPYDHK-ADVF 473
NLL+DE + +K++DFG+A R + ++ GT ++APE+++ + + + DV+
Sbjct: 133 PENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVW 192
Query: 474 SFGIVLWELLTGKLPYE 490
S GIVL +L G+LP++
Sbjct: 193 SCGIVLTAMLAGELPWD 209
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 60/197 (30%), Positives = 109/197 (55%), Gaps = 8/197 (4%)
Query: 300 VASGSYGD--LYRGTYCSQDVAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQFIGA 357
+ G+YG+ L + VA+K++ +R D + +E+ I + + H+NVV+F G
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRA-VDCPENIKKEICINKMLNHENVVKFYGH 73
Query: 358 CTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDLK 417
+ + E+ SGG ++D + G+ + P + + G+ YLH I HRD+K
Sbjct: 74 RREGNIQYLFLEYCSGGELFDRIEPDIGMPE-PDAQRFFHQLMAGVVYLHGIGITHRDIK 132
Query: 418 AANLLMDENEVVKVADFGVA---RVKAQSGVMTAETGTYRWMAPEVIEHKPYDHK-ADVF 473
NLL+DE + +K++DFG+A R + ++ GT ++APE+++ + + + DV+
Sbjct: 133 PENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVW 192
Query: 474 SFGIVLWELLTGKLPYE 490
S GIVL +L G+LP++
Sbjct: 193 SCGIVLTAMLAGELPWD 209
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 53/194 (27%), Positives = 99/194 (51%), Gaps = 5/194 (2%)
Query: 300 VASGSYGD--LYRGTYCSQDVAIKVLKPERINS-DMQKEFAQEVFIMRKVRHKNVVQFIG 356
+ G++G L R + A+K+L+ E I + D E +++ RH +
Sbjct: 13 LGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKY 72
Query: 357 ACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDL 416
A LC V E+ +GG ++ +L + + VF ++ + YLH ++++RD+
Sbjct: 73 AFQTHDRLCFVMEYANGGELFFHLSRER-VFTEERARFYGAEIVSALEYLHSRDVVYRDI 131
Query: 417 KAANLLMDENEVVKVADFGVARVKAQSG-VMTAETGTYRWMAPEVIEHKPYDHKADVFSF 475
K NL++D++ +K+ DFG+ + G M GT ++APEV+E Y D +
Sbjct: 132 KLENLMLDKDGHIKITDFGLCKEGISDGATMKXFCGTPEYLAPEVLEDNDYGRAVDWWGL 191
Query: 476 GIVLWELLTGKLPY 489
G+V++E++ G+LP+
Sbjct: 192 GVVMYEMMCGRLPF 205
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 60/197 (30%), Positives = 109/197 (55%), Gaps = 8/197 (4%)
Query: 300 VASGSYGD--LYRGTYCSQDVAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQFIGA 357
+ G+YG+ L + VA+K++ +R D + +E+ I + + H+NVV+F G
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRA-VDCPENIKKEICINKMLNHENVVKFYGH 72
Query: 358 CTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDLK 417
+ + E+ SGG ++D + G+ + P + + G+ YLH I HRD+K
Sbjct: 73 RREGNIQYLFLEYCSGGELFDRIEPDIGMPE-PDAQRFFHQLMAGVVYLHGIGITHRDIK 131
Query: 418 AANLLMDENEVVKVADFGVA---RVKAQSGVMTAETGTYRWMAPEVIEHKPYDHK-ADVF 473
NLL+DE + +K++DFG+A R + ++ GT ++APE+++ + + + DV+
Sbjct: 132 PENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVW 191
Query: 474 SFGIVLWELLTGKLPYE 490
S GIVL +L G+LP++
Sbjct: 192 SCGIVLTAMLAGELPWD 208
>pdb|2QLU|A Chain A, Crystal Structure Of Activin Receptor Type Ii Kinase
Domain From Human
Length = 314
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 71/230 (30%), Positives = 121/230 (52%), Gaps = 37/230 (16%)
Query: 301 ASGSYGDLYRGTYCSQDVAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQFIGACTK 360
A G +G +++ + VA+K+ P + Q E +E+F ++H+N++QFI A +
Sbjct: 24 ARGRFGCVWKAQLMNDFVAVKIF-PLQDKQSWQSE--REIFSTPGMKHENLLQFIAAEKR 80
Query: 361 PPSL----CIVTEFMSGGSVYDYLHKLKG-VFKLPSLLKVAIDVSKGMNYLHQN------ 409
+L ++T F GS+ DYL KG + L VA +S+G++YLH++
Sbjct: 81 GSNLEVELWLITAFHDKGSLTDYL---KGNIITWNELCHVAETMSRGLSYLHEDVPWCRG 137
Query: 410 -----NIIHRDLKAANLLMDENEVVKVADFGVARVKAQSGVMTAET----GTYRWMAPEV 460
+I HRD K+ N+L+ + +ADFG+A V+ + G +T GT R+MAPEV
Sbjct: 138 EGHKPSIAHRDFKSKNVLLKSDLTAVLADFGLA-VRFEPGKPPGDTHGQVGTRRYMAPEV 196
Query: 461 IE-----HKPYDHKADVFSFGIVLWELLT----GKLPY-EYLTPLQAAVG 500
+E + + D+++ G+VLWEL++ P EY+ P + +G
Sbjct: 197 LEGAINFQRDAFLRIDMYAMGLVLWELVSRCKAADGPVDEYMLPFEEEIG 246
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 60/197 (30%), Positives = 109/197 (55%), Gaps = 8/197 (4%)
Query: 300 VASGSYGD--LYRGTYCSQDVAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQFIGA 357
+ G+YG+ L + VA+K++ +R D + +E+ I + + H+NVV+F G
Sbjct: 13 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRA-VDCPENIKKEICINKMLNHENVVKFYGH 71
Query: 358 CTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDLK 417
+ + E+ SGG ++D + G+ + P + + G+ YLH I HRD+K
Sbjct: 72 RREGNIQYLFLEYCSGGELFDRIEPDIGMPE-PDAQRFFHQLMAGVVYLHGIGITHRDIK 130
Query: 418 AANLLMDENEVVKVADFGVA---RVKAQSGVMTAETGTYRWMAPEVIEHKPYDHK-ADVF 473
NLL+DE + +K++DFG+A R + ++ GT ++APE+++ + + + DV+
Sbjct: 131 PENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVW 190
Query: 474 SFGIVLWELLTGKLPYE 490
S GIVL +L G+LP++
Sbjct: 191 SCGIVLTAMLAGELPWD 207
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 60/197 (30%), Positives = 109/197 (55%), Gaps = 8/197 (4%)
Query: 300 VASGSYGD--LYRGTYCSQDVAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQFIGA 357
+ G+YG+ L + VA+K++ +R D + +E+ I + + H+NVV+F G
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRA-VDCPENIKKEICINKMLNHENVVKFYGH 72
Query: 358 CTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDLK 417
+ + E+ SGG ++D + G+ + P + + G+ YLH I HRD+K
Sbjct: 73 RREGNIQYLFLEYCSGGELFDRIEPDIGMPE-PDAQRFFHQLMAGVVYLHGIGITHRDIK 131
Query: 418 AANLLMDENEVVKVADFGVA---RVKAQSGVMTAETGTYRWMAPEVIEHKPYDHK-ADVF 473
NLL+DE + +K++DFG+A R + ++ GT ++APE+++ + + + DV+
Sbjct: 132 PENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHAEPVDVW 191
Query: 474 SFGIVLWELLTGKLPYE 490
S GIVL +L G+LP++
Sbjct: 192 SCGIVLTAMLAGELPWD 208
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 60/197 (30%), Positives = 109/197 (55%), Gaps = 8/197 (4%)
Query: 300 VASGSYGD--LYRGTYCSQDVAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQFIGA 357
+ G+YG+ L + VA+K++ +R D + +E+ I + + H+NVV+F G
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRA-VDCPENIKKEICINKMLNHENVVKFYGH 73
Query: 358 CTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDLK 417
+ + E+ SGG ++D + G+ + P + + G+ YLH I HRD+K
Sbjct: 74 RREGNIQYLFLEYCSGGELFDRIEPDIGMPE-PDAQRFFHQLMAGVVYLHGIGITHRDIK 132
Query: 418 AANLLMDENEVVKVADFGVA---RVKAQSGVMTAETGTYRWMAPEVIEHKPYDHK-ADVF 473
NLL+DE + +K++DFG+A R + ++ GT ++APE+++ + + + DV+
Sbjct: 133 PENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVW 192
Query: 474 SFGIVLWELLTGKLPYE 490
S GIVL +L G+LP++
Sbjct: 193 SCGIVLTAMLAGELPWD 209
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 60/197 (30%), Positives = 109/197 (55%), Gaps = 8/197 (4%)
Query: 300 VASGSYGD--LYRGTYCSQDVAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQFIGA 357
+ G+YG+ L + VA+K++ +R D + +E+ I + + H+NVV+F G
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRA-VDCPENIKKEIXINKMLNHENVVKFYGH 72
Query: 358 CTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDLK 417
+ + E+ SGG ++D + G+ + P + + G+ YLH I HRD+K
Sbjct: 73 RREGNIQYLFLEYCSGGELFDRIEPDIGMPE-PDAQRFFHQLMAGVVYLHGIGITHRDIK 131
Query: 418 AANLLMDENEVVKVADFGVA---RVKAQSGVMTAETGTYRWMAPEVIEHKPYDHK-ADVF 473
NLL+DE + +K++DFG+A R + ++ GT ++APE+++ + + + DV+
Sbjct: 132 PENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVW 191
Query: 474 SFGIVLWELLTGKLPYE 490
S GIVL +L G+LP++
Sbjct: 192 SCGIVLTAMLAGELPWD 208
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 60/197 (30%), Positives = 109/197 (55%), Gaps = 8/197 (4%)
Query: 300 VASGSYGD--LYRGTYCSQDVAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQFIGA 357
+ G+YG+ L + VA+K++ +R D + +E+ I + + H+NVV+F G
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRA-VDCPENIKKEICINKMLNHENVVKFYGH 73
Query: 358 CTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDLK 417
+ + E+ SGG ++D + G+ + P + + G+ YLH I HRD+K
Sbjct: 74 RREGNIQYLFLEYCSGGELFDRIEPDIGMPE-PDAQRFFHQLMAGVVYLHGIGITHRDIK 132
Query: 418 AANLLMDENEVVKVADFGVA---RVKAQSGVMTAETGTYRWMAPEVIEHKPYDHK-ADVF 473
NLL+DE + +K++DFG+A R + ++ GT ++APE+++ + + + DV+
Sbjct: 133 PENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVW 192
Query: 474 SFGIVLWELLTGKLPYE 490
S GIVL +L G+LP++
Sbjct: 193 SCGIVLTAMLAGELPWD 209
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 60/197 (30%), Positives = 109/197 (55%), Gaps = 8/197 (4%)
Query: 300 VASGSYGD--LYRGTYCSQDVAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQFIGA 357
+ G+YG+ L + VA+K++ +R D + +E+ I + + H+NVV+F G
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRA-VDCPENIKKEICINKMLNHENVVKFYGH 72
Query: 358 CTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDLK 417
+ + E+ SGG ++D + G+ + P + + G+ YLH I HRD+K
Sbjct: 73 RREGNIQYLFLEYCSGGELFDRIEPDIGMPE-PDAQRFFHQLMAGVVYLHGIGITHRDIK 131
Query: 418 AANLLMDENEVVKVADFGVA---RVKAQSGVMTAETGTYRWMAPEVIEHKPYDHK-ADVF 473
NLL+DE + +K++DFG+A R + ++ GT ++APE+++ + + + DV+
Sbjct: 132 PENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVW 191
Query: 474 SFGIVLWELLTGKLPYE 490
S GIVL +L G+LP++
Sbjct: 192 SCGIVLTAMLAGELPWD 208
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 60/197 (30%), Positives = 109/197 (55%), Gaps = 8/197 (4%)
Query: 300 VASGSYGD--LYRGTYCSQDVAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQFIGA 357
+ G+YG+ L + VA+K++ +R D + +E+ I + + H+NVV+F G
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRA-VDCPENIKKEIXINKMLNHENVVKFYGH 72
Query: 358 CTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDLK 417
+ + E+ SGG ++D + G+ + P + + G+ YLH I HRD+K
Sbjct: 73 RREGNIQYLFLEYCSGGELFDRIEPDIGMPE-PDAQRFFHQLMAGVVYLHGIGITHRDIK 131
Query: 418 AANLLMDENEVVKVADFGVA---RVKAQSGVMTAETGTYRWMAPEVIEHKPYDHK-ADVF 473
NLL+DE + +K++DFG+A R + ++ GT ++APE+++ + + + DV+
Sbjct: 132 PENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHAEPVDVW 191
Query: 474 SFGIVLWELLTGKLPYE 490
S GIVL +L G+LP++
Sbjct: 192 SCGIVLTAMLAGELPWD 208
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 60/197 (30%), Positives = 109/197 (55%), Gaps = 8/197 (4%)
Query: 300 VASGSYGD--LYRGTYCSQDVAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQFIGA 357
+ G+YG+ L + VA+K++ +R D + +E+ I + + H+NVV+F G
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRA-VDCPENIKKEICINKMLNHENVVKFYGH 72
Query: 358 CTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDLK 417
+ + E+ SGG ++D + G+ + P + + G+ YLH I HRD+K
Sbjct: 73 RREGNIQYLFLEYCSGGELFDRIEPDIGMPE-PDAQRFFHQLMAGVVYLHGIGITHRDIK 131
Query: 418 AANLLMDENEVVKVADFGVA---RVKAQSGVMTAETGTYRWMAPEVIEHKPYDHK-ADVF 473
NLL+DE + +K++DFG+A R + ++ GT ++APE+++ + + + DV+
Sbjct: 132 PENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVW 191
Query: 474 SFGIVLWELLTGKLPYE 490
S GIVL +L G+LP++
Sbjct: 192 SCGIVLTAMLAGELPWD 208
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 60/197 (30%), Positives = 109/197 (55%), Gaps = 8/197 (4%)
Query: 300 VASGSYGD--LYRGTYCSQDVAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQFIGA 357
+ G+YG+ L + VA+K++ +R D + +E+ I + + H+NVV+F G
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRA-VDCPENIKKEICINKMLNHENVVKFYGH 72
Query: 358 CTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDLK 417
+ + E+ SGG ++D + G+ + P + + G+ YLH I HRD+K
Sbjct: 73 RREGNIQYLFLEYCSGGELFDRIEPDIGMPE-PDAQRFFHQLMAGVVYLHGIGITHRDIK 131
Query: 418 AANLLMDENEVVKVADFGVA---RVKAQSGVMTAETGTYRWMAPEVIEHKPYDHK-ADVF 473
NLL+DE + +K++DFG+A R + ++ GT ++APE+++ + + + DV+
Sbjct: 132 PENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVW 191
Query: 474 SFGIVLWELLTGKLPYE 490
S GIVL +L G+LP++
Sbjct: 192 SCGIVLTAMLAGELPWD 208
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 60/197 (30%), Positives = 109/197 (55%), Gaps = 8/197 (4%)
Query: 300 VASGSYGD--LYRGTYCSQDVAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQFIGA 357
+ G+YG+ L + VA+K++ +R D + +E+ I + + H+NVV+F G
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRA-VDCPENIKKEICINKMLNHENVVKFYGH 72
Query: 358 CTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDLK 417
+ + E+ SGG ++D + G+ + P + + G+ YLH I HRD+K
Sbjct: 73 RREGNIQYLFLEYCSGGELFDRIEPDIGMPE-PDAQRFFHQLMAGVVYLHGIGITHRDIK 131
Query: 418 AANLLMDENEVVKVADFGVA---RVKAQSGVMTAETGTYRWMAPEVIEHKPYDHK-ADVF 473
NLL+DE + +K++DFG+A R + ++ GT ++APE+++ + + + DV+
Sbjct: 132 PENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVW 191
Query: 474 SFGIVLWELLTGKLPYE 490
S GIVL +L G+LP++
Sbjct: 192 SCGIVLTAMLAGELPWD 208
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 92.8 bits (229), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 60/197 (30%), Positives = 109/197 (55%), Gaps = 8/197 (4%)
Query: 300 VASGSYGD--LYRGTYCSQDVAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQFIGA 357
+ G+YG+ L + VA+K++ +R D + +E+ I + + H+NVV+F G
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRA-VDCPENIKKEIXINKMLNHENVVKFYGH 73
Query: 358 CTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDLK 417
+ + E+ SGG ++D + G+ + P + + G+ YLH I HRD+K
Sbjct: 74 RREGNIQYLFLEYCSGGELFDRIEPDIGMPE-PDAQRFFHQLMAGVVYLHGIGITHRDIK 132
Query: 418 AANLLMDENEVVKVADFGVA---RVKAQSGVMTAETGTYRWMAPEVIEHKPYDHK-ADVF 473
NLL+DE + +K++DFG+A R + ++ GT ++APE+++ + + + DV+
Sbjct: 133 PENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHAEPVDVW 192
Query: 474 SFGIVLWELLTGKLPYE 490
S GIVL +L G+LP++
Sbjct: 193 SCGIVLTAMLAGELPWD 209
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 92.8 bits (229), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 60/197 (30%), Positives = 109/197 (55%), Gaps = 8/197 (4%)
Query: 300 VASGSYGD--LYRGTYCSQDVAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQFIGA 357
+ G+YG+ L + VA+K++ +R D + +E+ I + + H+NVV+F G
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRA-VDCPENIKKEICINKMLNHENVVKFYGH 72
Query: 358 CTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDLK 417
+ + E+ SGG ++D + G+ + P + + G+ YLH I HRD+K
Sbjct: 73 RREGNIQYLFLEYCSGGELFDRIEPDIGMPE-PDAQRFFHQLMAGVVYLHGIGITHRDIK 131
Query: 418 AANLLMDENEVVKVADFGVA---RVKAQSGVMTAETGTYRWMAPEVIEHKPYDHK-ADVF 473
NLL+DE + +K++DFG+A R + ++ GT ++APE+++ + + + DV+
Sbjct: 132 PENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHAEPVDVW 191
Query: 474 SFGIVLWELLTGKLPYE 490
S GIVL +L G+LP++
Sbjct: 192 SCGIVLTAMLAGELPWD 208
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 92.8 bits (229), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 60/197 (30%), Positives = 109/197 (55%), Gaps = 8/197 (4%)
Query: 300 VASGSYGD--LYRGTYCSQDVAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQFIGA 357
+ G+YG+ L + VA+K++ +R D + +E+ I + + H+NVV+F G
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRA-VDCPENIKKEICINKMLNHENVVKFYGH 72
Query: 358 CTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDLK 417
+ + E+ SGG ++D + G+ + P + + G+ YLH I HRD+K
Sbjct: 73 RREGNIQYLFLEYCSGGELFDRIEPDIGMPE-PDAQRFFHQLMAGVVYLHGIGITHRDIK 131
Query: 418 AANLLMDENEVVKVADFGVA---RVKAQSGVMTAETGTYRWMAPEVIEHKPYDHK-ADVF 473
NLL+DE + +K++DFG+A R + ++ GT ++APE+++ + + + DV+
Sbjct: 132 PENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHAEPVDVW 191
Query: 474 SFGIVLWELLTGKLPYE 490
S GIVL +L G+LP++
Sbjct: 192 SCGIVLTAMLAGELPWD 208
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 92.8 bits (229), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 102/195 (52%), Gaps = 6/195 (3%)
Query: 300 VASGSYGDLYRGTY--CSQDVAIKVLKPERI--NSDMQKEFAQEVFIMRKVRHKNVVQFI 355
+ GS+G ++ + +Q AIK LK + + + D++ ++ + H +
Sbjct: 26 LGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMF 85
Query: 356 GACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRD 415
+L V E+++GG + ++ F L A ++ G+ +LH I++RD
Sbjct: 86 CTFQTKENLFFVMEYLNGGDLMYHIQSCHK-FDLSRATFYAAEIILGLQFLHSKGIVYRD 144
Query: 416 LKAANLLMDENEVVKVADFGVARVKAQSGVMTAE-TGTYRWMAPEVIEHKPYDHKADVFS 474
LK N+L+D++ +K+ADFG+ + T E GT ++APE++ + Y+H D +S
Sbjct: 145 LKLDNILLDKDGHIKIADFGMCKENMLGDAKTNEFCGTPDYIAPEILLGQKYNHSVDWWS 204
Query: 475 FGIVLWELLTGKLPY 489
FG++L+E+L G+ P+
Sbjct: 205 FGVLLYEMLIGQSPF 219
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 92.8 bits (229), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 70/265 (26%), Positives = 131/265 (49%), Gaps = 16/265 (6%)
Query: 232 EETEQLRAALEK--EVLKLERQGWPSHRSSSPTSEPEDTGMKSHPYHLKIPNDGTDVWEI 289
EE E+ A++ + LK + + RS SP+ +++G + L P + E
Sbjct: 97 EEREEWTTAIQTVADGLKKQEEEEMDFRSGSPS---DNSGAEEMEVSLAKPKHRVTMNEF 153
Query: 290 DPKHLKFGSKVASGSYGD--LYRGTYCSQDVAIKVLKPERI-NSDMQKEFAQEVFIMRKV 346
+ +LK + G++G L + + A+K+LK E I D E +++
Sbjct: 154 E--YLKL---LGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNS 208
Query: 347 RHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYL 406
RH + + LC V E+ +GG ++ +L + + VF ++ ++YL
Sbjct: 209 RHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRER-VFSEDRARFYGAEIVSALDYL 267
Query: 407 H-QNNIIHRDLKAANLLMDENEVVKVADFGVARVKAQSG-VMTAETGTYRWMAPEVIEHK 464
H + N+++RDLK NL++D++ +K+ DFG+ + + G M GT ++APEV+E
Sbjct: 268 HSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKTFCGTPEYLAPEVLEDN 327
Query: 465 PYDHKADVFSFGIVLWELLTGKLPY 489
Y D + G+V++E++ G+LP+
Sbjct: 328 DYGRAVDWWGLGVVMYEMMCGRLPF 352
>pdb|3ZUT|A Chain A, The Structure Of Ost1 (D160a) Kinase
pdb|3ZUT|B Chain B, The Structure Of Ost1 (D160a) Kinase
Length = 362
Score = 92.4 bits (228), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 61/197 (30%), Positives = 102/197 (51%), Gaps = 11/197 (5%)
Query: 300 VASGSYG--DLYRGTYCSQDVAIKVL-KPERINSDMQKEFAQEVFIMRKVRHKNVVQFIG 356
+ SG++G L R ++ VA+K + + E+I+ ++++E R +RH N+V+F
Sbjct: 27 IGSGNFGVARLMRDKQSNELVAVKYIERGEKIDENVKREIINH----RSLRHPNIVRFKE 82
Query: 357 ACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDL 416
P L IV E+ SGG +++ + G F + G++Y H + HRDL
Sbjct: 83 VILTPTHLAIVMEYASGGELFERICN-AGRFSEDEARFFFQQLISGVSYCHAMQVCHRDL 141
Query: 417 KAANLLMDENEV--VKVADFGVARVKAQSGVMTAETGTYRWMAPEVIEHKPYDHK-ADVF 473
K N L+D + +K+ FG ++ + GT ++APEV+ K YD K ADV+
Sbjct: 142 KLENTLLDGSPAPRLKICAFGYSKSSVLHSQPKSTVGTPAYIAPEVLLKKEYDGKVADVW 201
Query: 474 SFGIVLWELLTGKLPYE 490
S G+ L+ +L G P+E
Sbjct: 202 SCGVTLYVMLVGAYPFE 218
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 92.0 bits (227), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 62/207 (29%), Positives = 108/207 (52%), Gaps = 8/207 (3%)
Query: 300 VASGSYGD--LYRGTYCSQDVAIKVLKPERINSDMQKEFA-QEVFIMRKVRHKNVVQFIG 356
+ +GS+G L + A+K+L +++ Q E E I++ V +V+
Sbjct: 49 IGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 357 ACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDL 416
+ +L +V E+M GG ++ +L ++ G F P A + YLH ++I+RDL
Sbjct: 109 SFKDNSNLYMVMEYMPGGDMFSHLRRI-GRFSEPHARFYAAQIVLTFEYLHSLDLIYRDL 167
Query: 417 KAANLLMDENEVVKVADFGVA-RVKAQSGVMTAETGTYRWMAPEVIEHKPYDHKADVFSF 475
K NLL+D+ +KVADFG A RVK ++ + GT ++APE+I K Y+ D ++
Sbjct: 168 KPENLLIDQQGYIKVADFGFAKRVKGRTWXL---CGTPEYLAPEIILSKGYNKAVDWWAL 224
Query: 476 GIVLWELLTGKLPYEYLTPLQAAVGVV 502
G++++E+ G P+ P+Q +V
Sbjct: 225 GVLIYEMAAGYPPFFADQPIQIYEKIV 251
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 92.0 bits (227), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 62/207 (29%), Positives = 108/207 (52%), Gaps = 8/207 (3%)
Query: 300 VASGSYGD--LYRGTYCSQDVAIKVLKPERINSDMQKEFA-QEVFIMRKVRHKNVVQFIG 356
+ +GS+G L + A+K+L +++ Q E E I++ V +V+
Sbjct: 49 IGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 357 ACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDL 416
+ +L +V E+M GG ++ +L ++ G F P A + YLH ++I+RDL
Sbjct: 109 SFKDNSNLYMVMEYMPGGDMFSHLRRI-GRFSEPHARFYAAQIVLTFEYLHSLDLIYRDL 167
Query: 417 KAANLLMDENEVVKVADFGVA-RVKAQSGVMTAETGTYRWMAPEVIEHKPYDHKADVFSF 475
K NLL+D+ +KVADFG A RVK ++ + GT ++APE+I K Y+ D ++
Sbjct: 168 KPENLLIDQQGYIKVADFGFAKRVKGRTWXL---CGTPEYLAPEIILSKGYNKAVDWWAL 224
Query: 476 GIVLWELLTGKLPYEYLTPLQAAVGVV 502
G++++E+ G P+ P+Q +V
Sbjct: 225 GVLIYEMAAGYPPFFADQPIQIYEKIV 251
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 92.0 bits (227), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 110/210 (52%), Gaps = 24/210 (11%)
Query: 299 KVASGSYGD--LYRGTYCSQDVAIKVLKPERI--------NSDMQK---EFAQEVFIMRK 345
K+ SG+YG+ L + + AIKV+K + N +++K E E+ +++
Sbjct: 43 KLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKS 102
Query: 346 VRHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYL---HKLKGVFKLPSLLKVAIDVSKG 402
+ H N+++ +VTEF GG +++ + HK F + + G
Sbjct: 103 LDHPNIIKLFDVFEDKKYFYLVTEFYEGGELFEQIINRHK----FDECDAANIMKQILSG 158
Query: 403 MNYLHQNNIIHRDLKAANLLMDENEV---VKVADFGVARVKAQSGVMTAETGTYRWMAPE 459
+ YLH++NI+HRD+K N+L++ +K+ DFG++ ++ + GT ++APE
Sbjct: 159 ICYLHKHNIVHRDIKPENILLENKNSLLNIKIVDFGLSSFFSKDYKLRDRLGTAYYIAPE 218
Query: 460 VIEHKPYDHKADVFSFGIVLWELLTGKLPY 489
V++ K Y+ K DV+S G++++ LL G P+
Sbjct: 219 VLK-KKYNEKCDVWSCGVIMYILLCGYPPF 247
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 60/197 (30%), Positives = 108/197 (54%), Gaps = 8/197 (4%)
Query: 300 VASGSYGD--LYRGTYCSQDVAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQFIGA 357
+ G+YG+ L + VA+K++ +R D + +E+ I + H+NVV+F G
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRA-VDCPENIKKEICINAMLNHENVVKFYGH 73
Query: 358 CTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDLK 417
+ + E+ SGG ++D + G+ + P + + G+ YLH I HRD+K
Sbjct: 74 RREGNIQYLFLEYCSGGELFDRIEPDIGMPE-PDAQRFFHQLMAGVVYLHGIGITHRDIK 132
Query: 418 AANLLMDENEVVKVADFGVA---RVKAQSGVMTAETGTYRWMAPEVIEHKPYDHK-ADVF 473
NLL+DE + +K++DFG+A R + ++ GT ++APE+++ + + + DV+
Sbjct: 133 PENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVW 192
Query: 474 SFGIVLWELLTGKLPYE 490
S GIVL +L G+LP++
Sbjct: 193 SCGIVLTAMLAGELPWD 209
>pdb|3ZUU|A Chain A, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
pdb|3ZUU|B Chain B, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
Length = 362
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 61/197 (30%), Positives = 101/197 (51%), Gaps = 11/197 (5%)
Query: 300 VASGSYG--DLYRGTYCSQDVAIKVL-KPERINSDMQKEFAQEVFIMRKVRHKNVVQFIG 356
+ SG++G L R ++ VA+K + + E+I+ ++++E R +RH N+V+F
Sbjct: 27 IGSGNFGVARLMRDKQSNELVAVKYIERGEKIDENVKREIINH----RSLRHPNIVRFKE 82
Query: 357 ACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDL 416
P L IV E+ SGG +++ + G F + G++Y H + HRDL
Sbjct: 83 VILTPTHLAIVMEYASGGELFERICN-AGRFSEDEARFFFQQLISGVSYCHAMQVCHRDL 141
Query: 417 KAANLLMDENEV--VKVADFGVARVKAQSGVMTAETGTYRWMAPEVIEHKPYDHK-ADVF 473
K N L+D + +K+ FG ++ GT ++APEV+ K YD K ADV+
Sbjct: 142 KLENTLLDGSPAPRLKICAFGYSKSSVLHSQPKDTVGTPAYIAPEVLLKKEYDGKVADVW 201
Query: 474 SFGIVLWELLTGKLPYE 490
S G+ L+ +L G P+E
Sbjct: 202 SCGVTLYVMLVGAYPFE 218
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 105/197 (53%), Gaps = 13/197 (6%)
Query: 300 VASGSYGDLYRGTY--CSQDVAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQFIGA 357
+ GSY + R + + + A+KV+ + + + E ++R +H N++
Sbjct: 35 IGVGSYSECKRCVHKATNMEYAVKVIDKSKRDPSEEIEI-----LLRYGQHPNIITLKDV 89
Query: 358 CTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDLK 417
+ +VTE M GG + D + + K F V + K + YLH ++HRDLK
Sbjct: 90 YDDGKHVYLVTELMRGGELLDKILRQK-FFSEREASFVLHTIGKTVEYLHSQGVVHRDLK 148
Query: 418 AANLL-MDEN---EVVKVADFGVAR-VKAQSGVMTAETGTYRWMAPEVIEHKPYDHKADV 472
+N+L +DE+ E +++ DFG A+ ++A++G++ T ++APEV++ + YD D+
Sbjct: 149 PSNILYVDESGNPECLRICDFGFAKQLRAENGLLMTPCYTANFVAPEVLKRQGYDEGCDI 208
Query: 473 FSFGIVLWELLTGKLPY 489
+S GI+L+ +L G P+
Sbjct: 209 WSLGILLYTMLAGYTPF 225
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 105/197 (53%), Gaps = 13/197 (6%)
Query: 300 VASGSYGDLYRGTY--CSQDVAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQFIGA 357
+ GSY + R + + + A+KV+ + + + E ++R +H N++
Sbjct: 35 IGVGSYSECKRCVHKATNMEYAVKVIDKSKRDPSEEIEI-----LLRYGQHPNIITLKDV 89
Query: 358 CTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDLK 417
+ +VTE M GG + D + + K F V + K + YLH ++HRDLK
Sbjct: 90 YDDGKHVYLVTELMRGGELLDKILRQK-FFSEREASFVLHTIGKTVEYLHSQGVVHRDLK 148
Query: 418 AANLL-MDEN---EVVKVADFGVAR-VKAQSGVMTAETGTYRWMAPEVIEHKPYDHKADV 472
+N+L +DE+ E +++ DFG A+ ++A++G++ T ++APEV++ + YD D+
Sbjct: 149 PSNILYVDESGNPECLRICDFGFAKQLRAENGLLMTPCYTANFVAPEVLKRQGYDEGCDI 208
Query: 473 FSFGIVLWELLTGKLPY 489
+S GI+L+ +L G P+
Sbjct: 209 WSLGILLYTMLAGYTPF 225
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 56/170 (32%), Positives = 91/170 (53%), Gaps = 7/170 (4%)
Query: 322 VLKPERINSDMQKEFAQEVFIMRKVRHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLH 381
+LKP + +++ + E+ I R + H++VV F G + +V E S+ + LH
Sbjct: 59 LLKPHQ-----REKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLE-LH 112
Query: 382 KLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDLKAANLLMDENEVVKVADFGVA-RVK 440
K + P + G YLH+N +IHRDLK NL ++E+ VK+ DFG+A +V+
Sbjct: 113 KRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVE 172
Query: 441 AQSGVMTAETGTYRWMAPEVIEHKPYDHKADVFSFGIVLWELLTGKLPYE 490
GT ++APEV+ K + + DV+S G +++ LL GK P+E
Sbjct: 173 YDGERKKTLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFE 222
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 56/170 (32%), Positives = 91/170 (53%), Gaps = 7/170 (4%)
Query: 322 VLKPERINSDMQKEFAQEVFIMRKVRHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLH 381
+LKP + +++ + E+ I R + H++VV F G + +V E S+ + LH
Sbjct: 55 LLKPHQ-----REKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLE-LH 108
Query: 382 KLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDLKAANLLMDENEVVKVADFGVA-RVK 440
K + P + G YLH+N +IHRDLK NL ++E+ VK+ DFG+A +V+
Sbjct: 109 KRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVE 168
Query: 441 AQSGVMTAETGTYRWMAPEVIEHKPYDHKADVFSFGIVLWELLTGKLPYE 490
GT ++APEV+ K + + DV+S G +++ LL GK P+E
Sbjct: 169 YDGERKKTLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFE 218
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 56/170 (32%), Positives = 91/170 (53%), Gaps = 7/170 (4%)
Query: 322 VLKPERINSDMQKEFAQEVFIMRKVRHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLH 381
+LKP + +++ + E+ I R + H++VV F G + +V E S+ + LH
Sbjct: 55 LLKPHQ-----REKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLE-LH 108
Query: 382 KLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDLKAANLLMDENEVVKVADFGVA-RVK 440
K + P + G YLH+N +IHRDLK NL ++E+ VK+ DFG+A +V+
Sbjct: 109 KRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVE 168
Query: 441 AQSGVMTAETGTYRWMAPEVIEHKPYDHKADVFSFGIVLWELLTGKLPYE 490
GT ++APEV+ K + + DV+S G +++ LL GK P+E
Sbjct: 169 YDGERKKTLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFE 218
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 55/195 (28%), Positives = 101/195 (51%), Gaps = 9/195 (4%)
Query: 300 VASGSYGDLYRGTYCSQDVAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQFIGACT 359
+ GSY R + + + V ++ D +E ++R +H N++
Sbjct: 30 IGVGSYSVCKRCIHKATNXEFAVKIIDKSKRDPTEEIE---ILLRYGQHPNIITLKDVYD 86
Query: 360 KPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDLKAA 419
+ +VTE GG + D + + K F V ++K + YLH ++HRDLK +
Sbjct: 87 DGKYVYVVTELXKGGELLDKILRQK-FFSEREASAVLFTITKTVEYLHAQGVVHRDLKPS 145
Query: 420 NLL-MDEN---EVVKVADFGVAR-VKAQSGVMTAETGTYRWMAPEVIEHKPYDHKADVFS 474
N+L +DE+ E +++ DFG A+ ++A++G++ T ++APEV+E + YD D++S
Sbjct: 146 NILYVDESGNPESIRICDFGFAKQLRAENGLLXTPCYTANFVAPEVLERQGYDAACDIWS 205
Query: 475 FGIVLWELLTGKLPY 489
G++L+ LTG P+
Sbjct: 206 LGVLLYTXLTGYTPF 220
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 56/170 (32%), Positives = 91/170 (53%), Gaps = 7/170 (4%)
Query: 322 VLKPERINSDMQKEFAQEVFIMRKVRHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLH 381
+LKP + +++ + E+ I R + H++VV F G + +V E S+ + LH
Sbjct: 79 LLKPHQ-----REKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLE-LH 132
Query: 382 KLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDLKAANLLMDENEVVKVADFGVA-RVK 440
K + P + G YLH+N +IHRDLK NL ++E+ VK+ DFG+A +V+
Sbjct: 133 KRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVE 192
Query: 441 AQSGVMTAETGTYRWMAPEVIEHKPYDHKADVFSFGIVLWELLTGKLPYE 490
GT ++APEV+ K + + DV+S G +++ LL GK P+E
Sbjct: 193 YDGERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFE 242
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 56/177 (31%), Positives = 101/177 (57%), Gaps = 6/177 (3%)
Query: 318 VAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQFIGACTKPPSLCIVTEFMSGGSVY 377
VA+K++ +R D + +E+ I + + H+NVV+F G + + E+ SGG ++
Sbjct: 34 VAVKIVDMKRA-VDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELF 92
Query: 378 DYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDLKAANLLMDENEVVKVADFGVA 437
D + G+ + P + + G+ YLH I HRD+K NLL+DE + +K++DFG+A
Sbjct: 93 DRIEPDIGMPE-PDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLA 151
Query: 438 ---RVKAQSGVMTAETGTYRWMAPEVIEHKPYDHK-ADVFSFGIVLWELLTGKLPYE 490
R + ++ GT ++APE+++ + + + DV+S GIVL +L G+LP++
Sbjct: 152 TVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 56/170 (32%), Positives = 91/170 (53%), Gaps = 7/170 (4%)
Query: 322 VLKPERINSDMQKEFAQEVFIMRKVRHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLH 381
+LKP + +++ + E+ I R + H++VV F G + +V E S+ + LH
Sbjct: 77 LLKPHQ-----REKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLE-LH 130
Query: 382 KLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDLKAANLLMDENEVVKVADFGVA-RVK 440
K + P + G YLH+N +IHRDLK NL ++E+ VK+ DFG+A +V+
Sbjct: 131 KRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVE 190
Query: 441 AQSGVMTAETGTYRWMAPEVIEHKPYDHKADVFSFGIVLWELLTGKLPYE 490
GT ++APEV+ K + + DV+S G +++ LL GK P+E
Sbjct: 191 YDGERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFE 240
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 52/195 (26%), Positives = 101/195 (51%), Gaps = 6/195 (3%)
Query: 300 VASGSYGDLYRGTY--CSQDVAIKVLKPERI--NSDMQKEFAQEVFIMRKVRHKNVVQFI 355
+ GS+G ++ + +Q AIK LK + + + D++ ++ + H +
Sbjct: 25 LGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMF 84
Query: 356 GACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRD 415
+L V E+++GG + ++ F L A ++ G+ +LH I++RD
Sbjct: 85 CTFQTKENLFFVMEYLNGGDLMYHIQSCHK-FDLSRATFYAAEIILGLQFLHSKGIVYRD 143
Query: 416 LKAANLLMDENEVVKVADFGVARVKAQSGVMTAE-TGTYRWMAPEVIEHKPYDHKADVFS 474
LK N+L+D++ +K+ADFG+ + T GT ++APE++ + Y+H D +S
Sbjct: 144 LKLDNILLDKDGHIKIADFGMCKENMLGDAKTNXFCGTPDYIAPEILLGQKYNHSVDWWS 203
Query: 475 FGIVLWELLTGKLPY 489
FG++L+E+L G+ P+
Sbjct: 204 FGVLLYEMLIGQSPF 218
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 56/170 (32%), Positives = 91/170 (53%), Gaps = 7/170 (4%)
Query: 322 VLKPERINSDMQKEFAQEVFIMRKVRHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLH 381
+LKP + +++ + E+ I R + H++VV F G + +V E S+ + LH
Sbjct: 53 LLKPHQ-----REKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLE-LH 106
Query: 382 KLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDLKAANLLMDENEVVKVADFGVA-RVK 440
K + P + G YLH+N +IHRDLK NL ++E+ VK+ DFG+A +V+
Sbjct: 107 KRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVE 166
Query: 441 AQSGVMTAETGTYRWMAPEVIEHKPYDHKADVFSFGIVLWELLTGKLPYE 490
GT ++APEV+ K + + DV+S G +++ LL GK P+E
Sbjct: 167 YDGERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFE 216
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 47/152 (30%), Positives = 83/152 (54%), Gaps = 4/152 (2%)
Query: 342 IMRKVRHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKL---KGVFKLPSLLKVAID 398
I+ KV + +V A LC+V M+GG + +++ + F+ P +
Sbjct: 238 ILAKVHSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQ 297
Query: 399 VSKGMNYLHQNNIIHRDLKAANLLMDENEVVKVADFGVA-RVKAQSGVMTAETGTYRWMA 457
+ G+ +LHQ NII+RDLK N+L+D++ V+++D G+A +KA GT +MA
Sbjct: 298 IVSGLEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYAGTPGFMA 357
Query: 458 PEVIEHKPYDHKADVFSFGIVLWELLTGKLPY 489
PE++ + YD D F+ G+ L+E++ + P+
Sbjct: 358 PELLLGEEYDFSVDYFALGVTLYEMIAARGPF 389
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 102/195 (52%), Gaps = 6/195 (3%)
Query: 300 VASGSYGD--LYRGTYCSQDVAIKVLKPERINS-DMQKEFAQEVFIMRKVRHKNVVQFIG 356
+ G++G L + + A+K+LK E I + D E +++ RH +
Sbjct: 18 LGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKY 77
Query: 357 ACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLH-QNNIIHRD 415
+ LC V E+ +GG ++ +L + + VF ++ ++YLH + N+++RD
Sbjct: 78 SFQTHDRLCFVMEYANGGELFFHLSRER-VFSEDRARFYGAEIVSALDYLHSEKNVVYRD 136
Query: 416 LKAANLLMDENEVVKVADFGVARVKAQSG-VMTAETGTYRWMAPEVIEHKPYDHKADVFS 474
LK NL++D++ +K+ DFG+ + + G M GT ++APEV+E Y D +
Sbjct: 137 LKLENLMLDKDGHIKITDFGLCKEGIKDGATMKXFCGTPEYLAPEVLEDNDYGRAVDWWG 196
Query: 475 FGIVLWELLTGKLPY 489
G+V++E++ G+LP+
Sbjct: 197 LGVVMYEMMCGRLPF 211
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 47/152 (30%), Positives = 83/152 (54%), Gaps = 4/152 (2%)
Query: 342 IMRKVRHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKL---KGVFKLPSLLKVAID 398
I+ KV + +V A LC+V M+GG + +++ + F+ P +
Sbjct: 238 ILAKVHSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQ 297
Query: 399 VSKGMNYLHQNNIIHRDLKAANLLMDENEVVKVADFGVA-RVKAQSGVMTAETGTYRWMA 457
+ G+ +LHQ NII+RDLK N+L+D++ V+++D G+A +KA GT +MA
Sbjct: 298 IVSGLEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYAGTPGFMA 357
Query: 458 PEVIEHKPYDHKADVFSFGIVLWELLTGKLPY 489
PE++ + YD D F+ G+ L+E++ + P+
Sbjct: 358 PELLLGEEYDFSVDYFALGVTLYEMIAARGPF 389
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 47/152 (30%), Positives = 83/152 (54%), Gaps = 4/152 (2%)
Query: 342 IMRKVRHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKL---KGVFKLPSLLKVAID 398
I+ KV + +V A LC+V M+GG + +++ + F+ P +
Sbjct: 238 ILAKVHSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQ 297
Query: 399 VSKGMNYLHQNNIIHRDLKAANLLMDENEVVKVADFGVA-RVKAQSGVMTAETGTYRWMA 457
+ G+ +LHQ NII+RDLK N+L+D++ V+++D G+A +KA GT +MA
Sbjct: 298 IVSGLEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYAGTPGFMA 357
Query: 458 PEVIEHKPYDHKADVFSFGIVLWELLTGKLPY 489
PE++ + YD D F+ G+ L+E++ + P+
Sbjct: 358 PELLLGEEYDFSVDYFALGVTLYEMIAARGPF 389
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 61/207 (29%), Positives = 108/207 (52%), Gaps = 8/207 (3%)
Query: 300 VASGSYGD--LYRGTYCSQDVAIKVLKPERINSDMQKEFA-QEVFIMRKVRHKNVVQFIG 356
+ +GS+G L + A+K+L +++ Q E E I++ V +V+
Sbjct: 49 IGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 357 ACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDL 416
+ +L +V E++ GG ++ +L ++ G F P A + YLH ++I+RDL
Sbjct: 109 SFKDNSNLYMVMEYVPGGEMFSHLRRI-GRFSEPHARFYAAQIVLTFEYLHSLDLIYRDL 167
Query: 417 KAANLLMDENEVVKVADFGVA-RVKAQSGVMTAETGTYRWMAPEVIEHKPYDHKADVFSF 475
K NLL+D+ +KVADFG A RVK ++ + GT ++APE+I K Y+ D ++
Sbjct: 168 KPENLLIDQQGYIKVADFGFAKRVKGRTWXL---CGTPEYLAPEIILSKGYNKAVDWWAL 224
Query: 476 GIVLWELLTGKLPYEYLTPLQAAVGVV 502
G++++E+ G P+ P+Q +V
Sbjct: 225 GVLIYEMAAGYPPFFADQPIQIYEKIV 251
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 102/195 (52%), Gaps = 6/195 (3%)
Query: 300 VASGSYGD--LYRGTYCSQDVAIKVLKPERINS-DMQKEFAQEVFIMRKVRHKNVVQFIG 356
+ G++G L + + A+K+LK E I + D E +++ RH +
Sbjct: 17 LGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKY 76
Query: 357 ACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLH-QNNIIHRD 415
+ LC V E+ +GG ++ +L + + VF ++ ++YLH + N+++RD
Sbjct: 77 SFQTHDRLCFVMEYANGGELFFHLSRER-VFSEDRARFYGAEIVSALDYLHSEKNVVYRD 135
Query: 416 LKAANLLMDENEVVKVADFGVARVKAQSG-VMTAETGTYRWMAPEVIEHKPYDHKADVFS 474
LK NL++D++ +K+ DFG+ + + G M GT ++APEV+E Y D +
Sbjct: 136 LKLENLMLDKDGHIKITDFGLCKEGIKDGATMKXFCGTPEYLAPEVLEDNDYGRAVDWWG 195
Query: 475 FGIVLWELLTGKLPY 489
G+V++E++ G+LP+
Sbjct: 196 LGVVMYEMMCGRLPF 210
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 102/195 (52%), Gaps = 6/195 (3%)
Query: 300 VASGSYGD--LYRGTYCSQDVAIKVLKPERINS-DMQKEFAQEVFIMRKVRHKNVVQFIG 356
+ G++G L + + A+K+LK E I + D E +++ RH +
Sbjct: 16 LGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKY 75
Query: 357 ACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLH-QNNIIHRD 415
+ LC V E+ +GG ++ +L + + VF ++ ++YLH + N+++RD
Sbjct: 76 SFQTHDRLCFVMEYANGGELFFHLSRER-VFSEDRARFYGAEIVSALDYLHSEKNVVYRD 134
Query: 416 LKAANLLMDENEVVKVADFGVARVKAQSG-VMTAETGTYRWMAPEVIEHKPYDHKADVFS 474
LK NL++D++ +K+ DFG+ + + G M GT ++APEV+E Y D +
Sbjct: 135 LKLENLMLDKDGHIKITDFGLCKEGIKDGATMKXFCGTPEYLAPEVLEDNDYGRAVDWWG 194
Query: 475 FGIVLWELLTGKLPY 489
G+V++E++ G+LP+
Sbjct: 195 LGVVMYEMMCGRLPF 209
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 47/152 (30%), Positives = 83/152 (54%), Gaps = 4/152 (2%)
Query: 342 IMRKVRHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKL---KGVFKLPSLLKVAID 398
I+ KV + +V A LC+V M+GG + +++ + F+ P +
Sbjct: 238 ILAKVHSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQ 297
Query: 399 VSKGMNYLHQNNIIHRDLKAANLLMDENEVVKVADFGVA-RVKAQSGVMTAETGTYRWMA 457
+ G+ +LHQ NII+RDLK N+L+D++ V+++D G+A +KA GT +MA
Sbjct: 298 IVSGLEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYAGTPGFMA 357
Query: 458 PEVIEHKPYDHKADVFSFGIVLWELLTGKLPY 489
PE++ + YD D F+ G+ L+E++ + P+
Sbjct: 358 PELLLGEEYDFSVDYFALGVTLYEMIAARGPF 389
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 101/203 (49%), Gaps = 6/203 (2%)
Query: 293 HLKFGSKVASGSYGD--LYRGTYCSQDVAIKVLKPERI--NSDMQKEFAQEVFIMRKVRH 348
+ +F + GS+G L R A+KVLK + I + D++ ++ + H
Sbjct: 24 NFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARNH 83
Query: 349 KNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQ 408
+ Q P L V EF++GG + ++ K + F A ++ + +LH
Sbjct: 84 PFLTQLFCCFQTPDRLFFVMEFVNGGDLMFHIQKSRR-FDEARARFYAAEIISALMFLHD 142
Query: 409 NNIIHRDLKAANLLMDENEVVKVADFGVARVKAQSGVMTAE-TGTYRWMAPEVIEHKPYD 467
II+RDLK N+L+D K+ADFG+ + +GV TA GT ++APE+++ Y
Sbjct: 143 KGIIYRDLKLDNVLLDHEGHCKLADFGMCKEGICNGVTTATFCGTPDYIAPEILQEMLYG 202
Query: 468 HKADVFSFGIVLWELLTGKLPYE 490
D ++ G++L+E+L G P+E
Sbjct: 203 PAVDWWAMGVLLYEMLCGHAPFE 225
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 100/197 (50%), Gaps = 5/197 (2%)
Query: 297 GSKVASGSYGDLY--RGTYCSQDVAIKVLKPERINSD-MQKEFAQEVFIMRKVRHKNVVQ 353
G + G +G++Y R +A+KVL ++ + ++ + +E+ I +RH N+++
Sbjct: 19 GRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILR 78
Query: 354 FIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIH 413
+ ++ EF G +Y L K G F +++ ++Y H+ +IH
Sbjct: 79 MYNYFHDRKRIYLMLEFAPRGELYKELQK-HGRFDEQRSATFMEELADALHYCHERKVIH 137
Query: 414 RDLKAANLLMDENEVVKVADFGVARVKAQSGVMTAETGTYRWMAPEVIEHKPYDHKADVF 473
RD+K NLLM +K+ADFG + V A S GT ++ PE+IE K +D K D++
Sbjct: 138 RDIKPENLLMGYKGELKIADFGWS-VHAPSLRRRXMCGTLDYLPPEMIEGKTHDEKVDLW 196
Query: 474 SFGIVLWELLTGKLPYE 490
G++ +E L G P++
Sbjct: 197 CAGVLCYEFLVGMPPFD 213
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 100/197 (50%), Gaps = 5/197 (2%)
Query: 297 GSKVASGSYGDLY--RGTYCSQDVAIKVLKPERINSD-MQKEFAQEVFIMRKVRHKNVVQ 353
G + G +G++Y R +A+KVL ++ + ++ + +E+ I +RH N+++
Sbjct: 20 GRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILR 79
Query: 354 FIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIH 413
+ ++ EF G +Y L K G F +++ ++Y H+ +IH
Sbjct: 80 MYNYFHDRKRIYLMLEFAPRGELYKELQK-HGRFDEQRSATFMEELADALHYCHERKVIH 138
Query: 414 RDLKAANLLMDENEVVKVADFGVARVKAQSGVMTAETGTYRWMAPEVIEHKPYDHKADVF 473
RD+K NLLM +K+ADFG + V A S GT ++ PE+IE K +D K D++
Sbjct: 139 RDIKPENLLMGYKGELKIADFGWS-VHAPSLRRRXMCGTLDYLPPEMIEGKTHDEKVDLW 197
Query: 474 SFGIVLWELLTGKLPYE 490
G++ +E L G P++
Sbjct: 198 CAGVLCYEFLVGMPPFD 214
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 89.4 bits (220), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 59/197 (29%), Positives = 100/197 (50%), Gaps = 9/197 (4%)
Query: 300 VASGSYGDLY--RGTYCSQDVAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQFIGA 357
+ G +G++Y R + A+K L +RI + A IM + FI
Sbjct: 196 IGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVC 255
Query: 358 CT----KPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIH 413
+ P L + + M+GG ++ +L + GVF + A ++ G+ ++H +++
Sbjct: 256 MSYAFHTPDKLSFILDLMNGGDLHYHLSQ-HGVFSEADMRFYAAEIILGLEHMHNRFVVY 314
Query: 414 RDLKAANLLMDENEVVKVADFGVARVKAQSGVMTAETGTYRWMAPEVIEHK-PYDHKADV 472
RDLK AN+L+DE+ V+++D G+A A GT+ +MAPEV++ YD AD
Sbjct: 315 RDLKPANILLDEHGHVRISDLGLA-CDFSKKKPHASVGTHGYMAPEVLQKGVAYDSSADW 373
Query: 473 FSFGIVLWELLTGKLPY 489
FS G +L++LL G P+
Sbjct: 374 FSLGCMLFKLLRGHSPF 390
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 89.4 bits (220), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 59/197 (29%), Positives = 100/197 (50%), Gaps = 9/197 (4%)
Query: 300 VASGSYGDLY--RGTYCSQDVAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQFIGA 357
+ G +G++Y R + A+K L +RI + A IM + FI
Sbjct: 197 IGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVC 256
Query: 358 CT----KPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIH 413
+ P L + + M+GG ++ +L + GVF + A ++ G+ ++H +++
Sbjct: 257 MSYAFHTPDKLSFILDLMNGGDLHYHLSQ-HGVFSEADMRFYAAEIILGLEHMHNRFVVY 315
Query: 414 RDLKAANLLMDENEVVKVADFGVARVKAQSGVMTAETGTYRWMAPEVIEHK-PYDHKADV 472
RDLK AN+L+DE+ V+++D G+A A GT+ +MAPEV++ YD AD
Sbjct: 316 RDLKPANILLDEHGHVRISDLGLA-CDFSKKKPHASVGTHGYMAPEVLQKGVAYDSSADW 374
Query: 473 FSFGIVLWELLTGKLPY 489
FS G +L++LL G P+
Sbjct: 375 FSLGCMLFKLLRGHSPF 391
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 89.0 bits (219), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 59/199 (29%), Positives = 102/199 (51%), Gaps = 11/199 (5%)
Query: 315 SQDVAIKVLKPERINSD---MQKEFAQEVFIMRKVRHKNVVQFIGACTKPPSLCIVTEFM 371
Q A+K++ + S ++ +E I ++H ++V+ + + L +V EFM
Sbjct: 49 GQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVELLETYSSDGMLYMVFEFM 108
Query: 372 SGGSV-YDYLHKLKGVFKLPSLLK--VAIDVSKGMNYLHQNNIIHRDLKAANLLMDENE- 427
G + ++ + + F + + + + Y H NNIIHRD+K N+L+ E
Sbjct: 109 DGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHDNNIIHRDVKPENVLLASKEN 168
Query: 428 --VVKVADFGVARVKAQSG-VMTAETGTYRWMAPEVIEHKPYDHKADVFSFGIVLWELLT 484
VK+ DFGVA +SG V GT +MAPEV++ +PY DV+ G++L+ LL+
Sbjct: 169 SAPVKLGDFGVAIQLGESGLVAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLS 228
Query: 485 GKLPYEYLTPLQAAVGVVQ 503
G LP+ Y T + G+++
Sbjct: 229 GCLPF-YGTKERLFEGIIK 246
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 88.6 bits (218), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 59/197 (29%), Positives = 100/197 (50%), Gaps = 9/197 (4%)
Query: 300 VASGSYGDLY--RGTYCSQDVAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQFIGA 357
+ G +G++Y R + A+K L +RI + A IM + FI
Sbjct: 197 IGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVC 256
Query: 358 CT----KPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIH 413
+ P L + + M+GG ++ +L + GVF + A ++ G+ ++H +++
Sbjct: 257 MSYAFHTPDKLSFILDLMNGGDLHYHLSQ-HGVFSEADMRFYAAEIILGLEHMHNRFVVY 315
Query: 414 RDLKAANLLMDENEVVKVADFGVARVKAQSGVMTAETGTYRWMAPEVIEHK-PYDHKADV 472
RDLK AN+L+DE+ V+++D G+A A GT+ +MAPEV++ YD AD
Sbjct: 316 RDLKPANILLDEHGHVRISDLGLA-CDFSKKKPHASVGTHGYMAPEVLQKGVAYDSSADW 374
Query: 473 FSFGIVLWELLTGKLPY 489
FS G +L++LL G P+
Sbjct: 375 FSLGCMLFKLLRGHSPF 391
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 88.6 bits (218), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 59/197 (29%), Positives = 100/197 (50%), Gaps = 9/197 (4%)
Query: 300 VASGSYGDLY--RGTYCSQDVAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQFIGA 357
+ G +G++Y R + A+K L +RI + A IM + FI
Sbjct: 197 IGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVC 256
Query: 358 CT----KPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIH 413
+ P L + + M+GG ++ +L + GVF + A ++ G+ ++H +++
Sbjct: 257 MSYAFHTPDKLSFILDLMNGGDLHYHLSQ-HGVFSEADMRFYAAEIILGLEHMHNRFVVY 315
Query: 414 RDLKAANLLMDENEVVKVADFGVARVKAQSGVMTAETGTYRWMAPEVIEHK-PYDHKADV 472
RDLK AN+L+DE+ V+++D G+A A GT+ +MAPEV++ YD AD
Sbjct: 316 RDLKPANILLDEHGHVRISDLGLA-CDFSKKKPHASVGTHGYMAPEVLQKGVAYDSSADW 374
Query: 473 FSFGIVLWELLTGKLPY 489
FS G +L++LL G P+
Sbjct: 375 FSLGCMLFKLLRGHSPF 391
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 88.6 bits (218), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 62/241 (25%), Positives = 118/241 (48%), Gaps = 29/241 (12%)
Query: 300 VASGSYGDLYRGTYCSQDVAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQFIGAC- 358
+ SG +G +++ + D V+K + N++ + +EV + K+ H N+V + G
Sbjct: 19 IGSGGFGQVFKAKH-RIDGKTYVIKRVKYNNEKAE---REVKALAKLDHVNIVHYNGCWD 74
Query: 359 ---------------TKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAI--DVSK 401
+K L I EF G++ ++ K +G KL +L + + ++K
Sbjct: 75 GFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGE-KLDKVLALELFEQITK 133
Query: 402 GMNYLHQNNIIHRDLKAANLLMDENEVVKVADFGVARVKAQSGVMTAETGTYRWMAPEVI 461
G++Y+H +I+RDLK +N+ + + + VK+ DFG+ G GT R+M+PE I
Sbjct: 134 GVDYIHSKKLINRDLKPSNIFLVDTKQVKIGDFGLVTSLKNDGKRXRSKGTLRYMSPEQI 193
Query: 462 EHKPYDHKADVFSFGIVLWELL----TGKLPYEYLTPLQAAV--GVVQKVHHSFLEQRLR 515
+ Y + D+++ G++L ELL T ++ T L+ + + K + L++ L
Sbjct: 194 SSQDYGKEVDLYALGLILAELLHVCDTAFETSKFFTDLRDGIISDIFDKKEKTLLQKLLS 253
Query: 516 K 516
K
Sbjct: 254 K 254
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 88.2 bits (217), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 60/207 (28%), Positives = 108/207 (52%), Gaps = 8/207 (3%)
Query: 300 VASGSYGD--LYRGTYCSQDVAIKVLKPERINSDMQKEFA-QEVFIMRKVRHKNVVQFIG 356
+ +GS+G L + A+K+L +++ Q E E I++ V +V+
Sbjct: 36 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 95
Query: 357 ACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDL 416
+ +L +V E+++GG ++ +L ++ G F P A + YLH ++I+RDL
Sbjct: 96 SFKDNSNLYMVMEYVAGGEMFSHLRRI-GRFSEPHARFYAAQIVLTFEYLHSLDLIYRDL 154
Query: 417 KAANLLMDENEVVKVADFGVA-RVKAQSGVMTAETGTYRWMAPEVIEHKPYDHKADVFSF 475
K NLL+DE ++V DFG A RVK ++ + GT ++APE+I K Y+ D ++
Sbjct: 155 KPENLLIDEQGYIQVTDFGFAKRVKGRTWXL---CGTPEYLAPEIILSKGYNKAVDWWAL 211
Query: 476 GIVLWELLTGKLPYEYLTPLQAAVGVV 502
G++++E+ G P+ P+Q +V
Sbjct: 212 GVLIYEMAAGYPPFFADQPIQIYEKIV 238
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 48/113 (42%), Positives = 67/113 (59%), Gaps = 8/113 (7%)
Query: 385 GVFKLP----SLLKVAIDVSKGMNYLHQNNIIHRDLKAANLLMDENEVVKVADFGVAR-- 438
G +K P L+ + V++GM +L IHRDL A N+L+ EN VVK+ DFG+AR
Sbjct: 190 GFYKEPITMEDLISYSFQVARGMEFLSSRKCIHRDLAARNILLSENNVVKICDFGLARDI 249
Query: 439 VKAQSGVMTAETGT-YRWMAPEVIEHKPYDHKADVFSFGIVLWELLT-GKLPY 489
K V +T +WMAPE I K Y K+DV+S+G++LWE+ + G PY
Sbjct: 250 YKNPDYVRKGDTRLPLKWMAPESIFDKIYSTKSDVWSYGVLLWEIFSLGGSPY 302
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/121 (28%), Positives = 60/121 (49%), Gaps = 11/121 (9%)
Query: 278 KIPNDGTDVWEIDPKHLKFGSKVASGSYGDLYRGTY-------CSQDVAIKVLKPERINS 330
++P D + WE + LK G + G++G + + + + VA+K+LK E +
Sbjct: 14 RLPYDASK-WEFARERLKLGKSLGRGAFGKVVQASAFGIKKSPTCRTVAVKMLK-EGATA 71
Query: 331 DMQKEFAQEVFIMRKV-RHKNVVQFIGACTKPPS-LCIVTEFMSGGSVYDYLHKLKGVFK 388
K E+ I+ + H NVV +GACTK L ++ E+ G++ +YL + +F
Sbjct: 72 SEYKALMTELKILTHIGHHLNVVNLLGACTKQGGPLMVIVEYCKYGNLSNYLKSKRDLFF 131
Query: 389 L 389
L
Sbjct: 132 L 132
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 63/254 (24%), Positives = 119/254 (46%), Gaps = 42/254 (16%)
Query: 300 VASGSYGDLYRGTYCSQDVAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQFIGAC- 358
+ SG +G +++ + D V++ + N++ + +EV + K+ H N+V + G
Sbjct: 20 IGSGGFGQVFKAKH-RIDGKTYVIRRVKYNNEKAE---REVKALAKLDHVNIVHYNGCWD 75
Query: 359 ----------------------------TKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLP 390
+K L I EF G++ ++ K +G KL
Sbjct: 76 GFDYDPETSDDSLESSDYDPENSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGE-KLD 134
Query: 391 SLLKVAI--DVSKGMNYLHQNNIIHRDLKAANLLMDENEVVKVADFGVARVKAQSGVMTA 448
+L + + ++KG++Y+H +IHRDLK +N+ + + + VK+ DFG+ G T
Sbjct: 135 KVLALELFEQITKGVDYIHSKKLIHRDLKPSNIFLVDTKQVKIGDFGLVTSLKNDGKRTR 194
Query: 449 ETGTYRWMAPEVIEHKPYDHKADVFSFGIVLWELL----TGKLPYEYLTPLQAAV--GVV 502
GT R+M+PE I + Y + D+++ G++L ELL T ++ T L+ + +
Sbjct: 195 SKGTLRYMSPEQISSQDYGKEVDLYALGLILAELLHVCDTAFETSKFFTDLRDGIISDIF 254
Query: 503 QKVHHSFLEQRLRK 516
K + L++ L K
Sbjct: 255 DKKEKTLLQKLLSK 268
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 61/207 (29%), Positives = 106/207 (51%), Gaps = 8/207 (3%)
Query: 300 VASGSYGD--LYRGTYCSQDVAIKVLKPERINSDMQKEFA-QEVFIMRKVRHKNVVQFIG 356
+ +GS+G L + A+K+L +++ Q E E I + V +V+
Sbjct: 50 LGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRIQQAVNFPFLVKLEF 109
Query: 357 ACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDL 416
+ +L +V E+ GG ++ +L ++ G F P A + YLH ++I+RDL
Sbjct: 110 SFKDNSNLYMVLEYAPGGEMFSHLRRI-GRFSEPHARFYAAQIVLTFEYLHSLDLIYRDL 168
Query: 417 KAANLLMDENEVVKVADFGVA-RVKAQSGVMTAETGTYRWMAPEVIEHKPYDHKADVFSF 475
K NLL+D+ +KVADFG A RVK ++ + GT ++APE+I K Y+ D ++
Sbjct: 169 KPENLLIDQQGYIKVADFGFAKRVKGRTWXL---CGTPEYLAPEIILSKGYNKAVDWWAL 225
Query: 476 GIVLWELLTGKLPYEYLTPLQAAVGVV 502
G++++E+ G P+ P+Q +V
Sbjct: 226 GVLIYEMAAGYPPFFADQPIQIYEKIV 252
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 55/194 (28%), Positives = 99/194 (51%), Gaps = 5/194 (2%)
Query: 300 VASGSYGDLY--RGTYCSQDVAIKVLKPERINSD-MQKEFAQEVFIMRKVRHKNVVQFIG 356
+ G +G++Y R +A+KVL ++ + ++ + +E+ I +RH N+++
Sbjct: 22 LGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYN 81
Query: 357 ACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDL 416
+ ++ EF G +Y L K G F +++ ++Y H+ +IHRD+
Sbjct: 82 YFHDRKRIYLMLEFAPRGELYKELQK-HGRFDEQRSATFMEELADALHYCHERKVIHRDI 140
Query: 417 KAANLLMDENEVVKVADFGVARVKAQSGVMTAETGTYRWMAPEVIEHKPYDHKADVFSFG 476
K NLLM +K+ADFG + V A S GT ++ PE+IE K +D K D++ G
Sbjct: 141 KPENLLMGYKGELKIADFGWS-VHAPSLRRRXMCGTLDYLPPEMIEGKTHDEKVDLWCAG 199
Query: 477 IVLWELLTGKLPYE 490
++ +E L G P++
Sbjct: 200 VLCYEFLVGMPPFD 213
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 108/207 (52%), Gaps = 8/207 (3%)
Query: 300 VASGSYGD--LYRGTYCSQDVAIKVLKPERINSDMQKEFA-QEVFIMRKVRHKNVVQFIG 356
+ +GS+G L + A+K+L +++ Q E E I++ V +V+
Sbjct: 49 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 357 ACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDL 416
+ +L +V E+++GG ++ +L ++ G F P A + YLH ++I+RDL
Sbjct: 109 SFKDNSNLYMVMEYVAGGEMFSHLRRI-GRFSEPHARFYAAQIVLTFEYLHSLDLIYRDL 167
Query: 417 KAANLLMDENEVVKVADFGVA-RVKAQSGVMTAETGTYRWMAPEVIEHKPYDHKADVFSF 475
K NLL+D+ ++V DFG A RVK ++ + GT ++APE+I K Y+ D ++
Sbjct: 168 KPENLLIDQQGYIQVTDFGFAKRVKGRTWXL---CGTPEYLAPEIILSKGYNKAVDWWAL 224
Query: 476 GIVLWELLTGKLPYEYLTPLQAAVGVV 502
G++++E+ G P+ P+Q +V
Sbjct: 225 GVLIYEMAAGYPPFFADQPIQIYEKIV 251
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 108/207 (52%), Gaps = 8/207 (3%)
Query: 300 VASGSYGD--LYRGTYCSQDVAIKVLKPERINSDMQKEFA-QEVFIMRKVRHKNVVQFIG 356
+ +GS+G L + A+K+L +++ Q E E I++ V +V+
Sbjct: 49 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 357 ACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDL 416
+ +L +V E+++GG ++ +L ++ G F P A + YLH ++I+RDL
Sbjct: 109 SFKDNSNLYMVMEYVAGGEMFSHLRRI-GRFSEPHARFYAAQIVLTFEYLHSLDLIYRDL 167
Query: 417 KAANLLMDENEVVKVADFGVA-RVKAQSGVMTAETGTYRWMAPEVIEHKPYDHKADVFSF 475
K NLL+D+ ++V DFG A RVK ++ + GT ++APE+I K Y+ D ++
Sbjct: 168 KPENLLIDQQGYIQVTDFGFAKRVKGRTWXL---CGTPEYLAPEIILSKGYNKAVDWWAL 224
Query: 476 GIVLWELLTGKLPYEYLTPLQAAVGVV 502
G++++E+ G P+ P+Q +V
Sbjct: 225 GVLIYEMAAGYPPFFADQPIQIYEKIV 251
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 108/207 (52%), Gaps = 8/207 (3%)
Query: 300 VASGSYGD--LYRGTYCSQDVAIKVLKPERINSDMQKEFA-QEVFIMRKVRHKNVVQFIG 356
+ +GS+G L + A+K+L +++ Q E E I++ V +V+
Sbjct: 49 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 357 ACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDL 416
+ +L +V E+++GG ++ +L ++ G F P A + YLH ++I+RDL
Sbjct: 109 SFKDNSNLYMVMEYVAGGEMFSHLRRI-GRFSEPHARFYAAQIVLTFEYLHSLDLIYRDL 167
Query: 417 KAANLLMDENEVVKVADFGVA-RVKAQSGVMTAETGTYRWMAPEVIEHKPYDHKADVFSF 475
K NLL+D+ ++V DFG A RVK ++ + GT ++APE+I K Y+ D ++
Sbjct: 168 KPENLLIDQQGYIQVTDFGFAKRVKGRTWXL---AGTPEYLAPEIILSKGYNKAVDWWAL 224
Query: 476 GIVLWELLTGKLPYEYLTPLQAAVGVV 502
G++++E+ G P+ P+Q +V
Sbjct: 225 GVLIYEMAAGYPPFFADQPIQIYEKIV 251
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 108/207 (52%), Gaps = 8/207 (3%)
Query: 300 VASGSYGD--LYRGTYCSQDVAIKVLKPERINSDMQKEFA-QEVFIMRKVRHKNVVQFIG 356
+ +GS+G L + A+K+L +++ Q E E I++ V +V+
Sbjct: 70 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 129
Query: 357 ACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDL 416
+ +L +V E+++GG ++ +L ++ G F P A + YLH ++I+RDL
Sbjct: 130 SFKDNSNLYMVMEYVAGGEMFSHLRRI-GRFXEPHARFYAAQIVLTFEYLHSLDLIYRDL 188
Query: 417 KAANLLMDENEVVKVADFGVA-RVKAQSGVMTAETGTYRWMAPEVIEHKPYDHKADVFSF 475
K NLL+D+ ++V DFG A RVK ++ + GT ++APE+I K Y+ D ++
Sbjct: 189 KPENLLIDQQGYIQVTDFGFAKRVKGRTWXL---CGTPEYLAPEIILSKGYNKAVDWWAL 245
Query: 476 GIVLWELLTGKLPYEYLTPLQAAVGVV 502
G++++E+ G P+ P+Q +V
Sbjct: 246 GVLIYEMAAGYPPFFADQPIQIYEKIV 272
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 108/207 (52%), Gaps = 8/207 (3%)
Query: 300 VASGSYGD--LYRGTYCSQDVAIKVLKPERINSDMQKEFA-QEVFIMRKVRHKNVVQFIG 356
+ +GS+G L + A+K+L +++ Q E E I++ V +V+
Sbjct: 44 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 103
Query: 357 ACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDL 416
+ +L +V E+++GG ++ +L ++ G F P A + YLH ++I+RDL
Sbjct: 104 SFKDNSNLYMVMEYVAGGEMFSHLRRI-GRFXEPHARFYAAQIVLTFEYLHSLDLIYRDL 162
Query: 417 KAANLLMDENEVVKVADFGVA-RVKAQSGVMTAETGTYRWMAPEVIEHKPYDHKADVFSF 475
K NLL+D+ ++V DFG A RVK ++ + GT ++APE+I K Y+ D ++
Sbjct: 163 KPENLLIDQQGYIQVTDFGFAKRVKGRTWXL---CGTPEYLAPEIILSKGYNKAVDWWAL 219
Query: 476 GIVLWELLTGKLPYEYLTPLQAAVGVV 502
G++++E+ G P+ P+Q +V
Sbjct: 220 GVLIYEMAAGYPPFFADQPIQIYEKIV 246
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 108/207 (52%), Gaps = 8/207 (3%)
Query: 300 VASGSYGD--LYRGTYCSQDVAIKVLKPERINSDMQKEFA-QEVFIMRKVRHKNVVQFIG 356
+ +GS+G L + A+K+L +++ Q E E I++ V +V+
Sbjct: 49 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 357 ACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDL 416
+ +L +V E+++GG ++ +L ++ G F P A + YLH ++I+RDL
Sbjct: 109 SFKDNSNLYMVMEYVAGGEMFSHLRRI-GRFSEPHARFYAAQIVLTFEYLHSLDLIYRDL 167
Query: 417 KAANLLMDENEVVKVADFGVA-RVKAQSGVMTAETGTYRWMAPEVIEHKPYDHKADVFSF 475
K NLL+D+ ++V DFG A RVK ++ + GT ++APE+I K Y+ D ++
Sbjct: 168 KPENLLIDQQGYIQVTDFGFAKRVKGRTWXL---XGTPEYLAPEIILSKGYNKAVDWWAL 224
Query: 476 GIVLWELLTGKLPYEYLTPLQAAVGVV 502
G++++E+ G P+ P+Q +V
Sbjct: 225 GVLIYEMAAGYPPFFADQPIQIYEKIV 251
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 108/207 (52%), Gaps = 8/207 (3%)
Query: 300 VASGSYGD--LYRGTYCSQDVAIKVLKPERINSDMQKEFA-QEVFIMRKVRHKNVVQFIG 356
+ +GS+G L + A+K+L +++ Q E E I++ V +V+
Sbjct: 49 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 357 ACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDL 416
+ +L +V E+++GG ++ +L ++ G F P A + YLH ++I+RDL
Sbjct: 109 SFKDNSNLYMVMEYVAGGEMFSHLRRI-GRFSEPHARFYAAQIVLTFEYLHSLDLIYRDL 167
Query: 417 KAANLLMDENEVVKVADFGVA-RVKAQSGVMTAETGTYRWMAPEVIEHKPYDHKADVFSF 475
K NLL+D+ ++V DFG A RVK ++ + GT ++APE+I K Y+ D ++
Sbjct: 168 KPENLLIDQQGYIQVTDFGFAKRVKGRTWXL---CGTPEYLAPEIILSKGYNKAVDWWAL 224
Query: 476 GIVLWELLTGKLPYEYLTPLQAAVGVV 502
G++++E+ G P+ P+Q +V
Sbjct: 225 GVLIYEMAAGYPPFFADQPIQIYEKIV 251
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 108/207 (52%), Gaps = 8/207 (3%)
Query: 300 VASGSYGD--LYRGTYCSQDVAIKVLKPERINSDMQKEFA-QEVFIMRKVRHKNVVQFIG 356
+ +GS+G L + A+K+L +++ Q E E I++ V +V+
Sbjct: 49 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 357 ACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDL 416
+ +L +V E+++GG ++ +L ++ G F P A + YLH ++I+RDL
Sbjct: 109 SFKDNSNLYMVMEYVAGGEMFSHLRRI-GRFSEPHARFYAAQIVLTFEYLHSLDLIYRDL 167
Query: 417 KAANLLMDENEVVKVADFGVA-RVKAQSGVMTAETGTYRWMAPEVIEHKPYDHKADVFSF 475
K NLL+D+ ++V DFG A RVK ++ + GT ++APE+I K Y+ D ++
Sbjct: 168 KPENLLIDQQGYIQVTDFGFAKRVKGRTWXL---CGTPEYLAPEIILSKGYNKAVDWWAL 224
Query: 476 GIVLWELLTGKLPYEYLTPLQAAVGVV 502
G++++E+ G P+ P+Q +V
Sbjct: 225 GVLIYEMAAGYPPFFADQPIQIYEKIV 251
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 108/207 (52%), Gaps = 8/207 (3%)
Query: 300 VASGSYGD--LYRGTYCSQDVAIKVLKPERINSDMQKEFA-QEVFIMRKVRHKNVVQFIG 356
+ +GS+G L + A+K+L +++ Q E E I++ V +V+
Sbjct: 50 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 109
Query: 357 ACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDL 416
+ +L +V E+++GG ++ +L ++ G F P A + YLH ++I+RDL
Sbjct: 110 SFKDNSNLYMVMEYVAGGEMFSHLRRI-GRFSEPHARFYAAQIVLTFEYLHSLDLIYRDL 168
Query: 417 KAANLLMDENEVVKVADFGVA-RVKAQSGVMTAETGTYRWMAPEVIEHKPYDHKADVFSF 475
K NLL+D+ ++V DFG A RVK ++ + GT ++APE+I K Y+ D ++
Sbjct: 169 KPENLLIDQQGYIQVTDFGFAKRVKGRTWXL---CGTPEYLAPEIILSKGYNKAVDWWAL 225
Query: 476 GIVLWELLTGKLPYEYLTPLQAAVGVV 502
G++++E+ G P+ P+Q +V
Sbjct: 226 GVLIYEMAAGYPPFFADQPIQIYEKIV 252
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 108/207 (52%), Gaps = 8/207 (3%)
Query: 300 VASGSYGD--LYRGTYCSQDVAIKVLKPERINSDMQKEFA-QEVFIMRKVRHKNVVQFIG 356
+ +GS+G L + A+K+L +++ Q E E I++ V +V+
Sbjct: 49 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 357 ACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDL 416
+ +L +V E+++GG ++ +L ++ G F P A + YLH ++I+RDL
Sbjct: 109 SFKDNSNLYMVMEYVAGGEMFSHLRRI-GRFSEPHARFYAAQIVLTFEYLHSLDLIYRDL 167
Query: 417 KAANLLMDENEVVKVADFGVA-RVKAQSGVMTAETGTYRWMAPEVIEHKPYDHKADVFSF 475
K NLL+D+ ++V DFG A RVK ++ + GT ++APE+I K Y+ D ++
Sbjct: 168 KPENLLIDQQGYIQVTDFGFAKRVKGRTWXL---CGTPEYLAPEIILSKGYNKAVDWWAL 224
Query: 476 GIVLWELLTGKLPYEYLTPLQAAVGVV 502
G++++E+ G P+ P+Q +V
Sbjct: 225 GVLIYEMAAGYPPFFADQPIQIYEKIV 251
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 108/207 (52%), Gaps = 8/207 (3%)
Query: 300 VASGSYGD--LYRGTYCSQDVAIKVLKPERINSDMQKEFA-QEVFIMRKVRHKNVVQFIG 356
+ +GS+G L + A+K+L +++ Q E E I++ V +V+
Sbjct: 49 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 357 ACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDL 416
+ +L +V E+++GG ++ +L ++ G F P A + YLH ++I+RDL
Sbjct: 109 SFKDNSNLYMVMEYVAGGEMFSHLRRI-GRFXEPHARFYAAQIVLTFEYLHSLDLIYRDL 167
Query: 417 KAANLLMDENEVVKVADFGVA-RVKAQSGVMTAETGTYRWMAPEVIEHKPYDHKADVFSF 475
K NLL+D+ ++V DFG A RVK ++ + GT ++APE+I K Y+ D ++
Sbjct: 168 KPENLLIDQQGYIQVTDFGFAKRVKGRTWXL---CGTPEYLAPEIILSKGYNKAVDWWAL 224
Query: 476 GIVLWELLTGKLPYEYLTPLQAAVGVV 502
G++++E+ G P+ P+Q +V
Sbjct: 225 GVLIYEMAAGYPPFFADQPIQIYEKIV 251
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 108/207 (52%), Gaps = 8/207 (3%)
Query: 300 VASGSYGD--LYRGTYCSQDVAIKVLKPERINSDMQKEFA-QEVFIMRKVRHKNVVQFIG 356
+ +GS+G L + A+K+L +++ Q E E I++ V +V+
Sbjct: 49 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 357 ACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDL 416
+ +L +V E+++GG ++ +L ++ G F P A + YLH ++I+RDL
Sbjct: 109 SFKDNSNLYMVMEYVAGGEMFSHLRRI-GRFSEPHARFYAAQIVLTFEYLHSLDLIYRDL 167
Query: 417 KAANLLMDENEVVKVADFGVA-RVKAQSGVMTAETGTYRWMAPEVIEHKPYDHKADVFSF 475
K NLL+D+ ++V DFG A RVK ++ + GT ++APE+I K Y+ D ++
Sbjct: 168 KPENLLIDQQGYIQVTDFGFAKRVKGRTWXL---CGTPEYLAPEIILSKGYNKAVDWWAL 224
Query: 476 GIVLWELLTGKLPYEYLTPLQAAVGVV 502
G++++E+ G P+ P+Q +V
Sbjct: 225 GVLIYEMAAGYPPFFADEPIQIYEKIV 251
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 108/207 (52%), Gaps = 8/207 (3%)
Query: 300 VASGSYGD--LYRGTYCSQDVAIKVLKPERINSDMQKEFA-QEVFIMRKVRHKNVVQFIG 356
+ +GS+G L + A+K+L +++ Q E E I++ V +V+
Sbjct: 49 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 357 ACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDL 416
+ +L +V E+++GG ++ +L ++ G F P A + YLH ++I+RDL
Sbjct: 109 SFKDNSNLYMVMEYVAGGEMFSHLRRI-GRFXEPHARFYAAQIVLTFEYLHSLDLIYRDL 167
Query: 417 KAANLLMDENEVVKVADFGVA-RVKAQSGVMTAETGTYRWMAPEVIEHKPYDHKADVFSF 475
K NLL+D+ ++V DFG A RVK ++ + GT ++APE+I K Y+ D ++
Sbjct: 168 KPENLLIDQQGYIQVTDFGFAKRVKGRTWXL---CGTPEYLAPEIILSKGYNKAVDWWAL 224
Query: 476 GIVLWELLTGKLPYEYLTPLQAAVGVV 502
G++++E+ G P+ P+Q +V
Sbjct: 225 GVLIYEMAAGYPPFFADQPIQIYEKIV 251
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 107/207 (51%), Gaps = 8/207 (3%)
Query: 300 VASGSYGD--LYRGTYCSQDVAIKVLKPERINSDMQKEFA-QEVFIMRKVRHKNVVQFIG 356
+ +GS+G L + A+K+L +++ Q E E I++ V +V+
Sbjct: 50 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 109
Query: 357 ACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDL 416
+ +L +V E++ GG ++ +L ++ G F P A + YLH ++I+RDL
Sbjct: 110 SFKDNSNLYMVMEYVPGGEMFSHLRRI-GRFSEPHARFYAAQIVLTFEYLHSLDLIYRDL 168
Query: 417 KAANLLMDENEVVKVADFGVA-RVKAQSGVMTAETGTYRWMAPEVIEHKPYDHKADVFSF 475
K NLL+D+ ++V DFG A RVK ++ + GT ++APE+I K Y+ D ++
Sbjct: 169 KPENLLIDQQGYIQVTDFGFAKRVKGRTWTL---CGTPEYLAPEIILSKGYNKAVDWWAL 225
Query: 476 GIVLWELLTGKLPYEYLTPLQAAVGVV 502
G++++E+ G P+ P+Q +V
Sbjct: 226 GVLIYEMAAGYPPFFADQPIQIYEKIV 252
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 108/207 (52%), Gaps = 8/207 (3%)
Query: 300 VASGSYGD--LYRGTYCSQDVAIKVLKPERINSDMQKEFA-QEVFIMRKVRHKNVVQFIG 356
+ +GS+G L + A+K+L +++ Q E E I++ V +V+
Sbjct: 49 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 357 ACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDL 416
+ +L +V E+++GG ++ +L ++ G F P A + YLH ++I+RDL
Sbjct: 109 SFKDNSNLYMVMEYVAGGEMFSHLRRI-GRFXEPHARFYAAQIVLTFEYLHSLDLIYRDL 167
Query: 417 KAANLLMDENEVVKVADFGVA-RVKAQSGVMTAETGTYRWMAPEVIEHKPYDHKADVFSF 475
K NLL+D+ ++V DFG A RVK ++ + GT ++APE+I K Y+ D ++
Sbjct: 168 KPENLLIDQQGYIQVTDFGFAKRVKGRTWXL---CGTPEYLAPEIILSKGYNKAVDWWAL 224
Query: 476 GIVLWELLTGKLPYEYLTPLQAAVGVV 502
G++++E+ G P+ P+Q +V
Sbjct: 225 GVLIYEMAAGYPPFFADQPIQIYEKIV 251
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 108/207 (52%), Gaps = 8/207 (3%)
Query: 300 VASGSYGD--LYRGTYCSQDVAIKVLKPERINSDMQKEFA-QEVFIMRKVRHKNVVQFIG 356
+ +GS+G L + A+K+L +++ Q E E I++ V +V+
Sbjct: 49 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 357 ACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDL 416
+ +L +V E+++GG ++ +L ++ G F P A + YLH ++I+RDL
Sbjct: 109 SFKDNSNLYMVMEYVAGGEMFSHLRRI-GRFAEPHARFYAAQIVLTFEYLHSLDLIYRDL 167
Query: 417 KAANLLMDENEVVKVADFGVA-RVKAQSGVMTAETGTYRWMAPEVIEHKPYDHKADVFSF 475
K NLL+D+ ++V DFG A RVK ++ + GT ++APE+I K Y+ D ++
Sbjct: 168 KPENLLIDQQGYIQVTDFGFAKRVKGRTWXL---CGTPEYLAPEIILSKGYNKAVDWWAL 224
Query: 476 GIVLWELLTGKLPYEYLTPLQAAVGVV 502
G++++E+ G P+ P+Q +V
Sbjct: 225 GVLIYEMAAGYPPFFADQPIQIYEKIV 251
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 107/207 (51%), Gaps = 8/207 (3%)
Query: 300 VASGSYGD--LYRGTYCSQDVAIKVLKPERINSDMQKEFA-QEVFIMRKVRHKNVVQFIG 356
+ +GS+G L + A+K+L +++ Q E E I++ V +V+
Sbjct: 70 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 129
Query: 357 ACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDL 416
+ +L +V E+++GG ++ +L ++ G F P A + YLH ++I+RDL
Sbjct: 130 SFKDNSNLYMVMEYVAGGEMFSHLRRI-GRFSEPHARFYAAQIVLTFEYLHSLDLIYRDL 188
Query: 417 KAANLLMDENEVVKVADFGVA-RVKAQSGVMTAETGTYRWMAPEVIEHKPYDHKADVFSF 475
K NLL+D+ ++V DFG A RVK + + GT ++APE+I K Y+ D ++
Sbjct: 189 KPENLLIDQQGYIQVTDFGFAKRVKGATWTL---CGTPEYLAPEIILSKGYNKAVDWWAL 245
Query: 476 GIVLWELLTGKLPYEYLTPLQAAVGVV 502
G++++E+ G P+ P+Q +V
Sbjct: 246 GVLIYEMAAGYPPFFADQPIQIYEKIV 272
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 107/207 (51%), Gaps = 8/207 (3%)
Query: 300 VASGSYGD--LYRGTYCSQDVAIKVLKPERINSDMQKEFA-QEVFIMRKVRHKNVVQFIG 356
+ +GS+G L + A+K+L +++ Q E E I++ V +V+
Sbjct: 35 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 94
Query: 357 ACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDL 416
+ +L +V E++ GG ++ +L ++ G F P A + YLH ++I+RDL
Sbjct: 95 SFKDNSNLYMVMEYVPGGEMFSHLRRI-GRFSEPHARFYAAQIVLTFEYLHSLDLIYRDL 153
Query: 417 KAANLLMDENEVVKVADFGVA-RVKAQSGVMTAETGTYRWMAPEVIEHKPYDHKADVFSF 475
K NLL+D+ ++V DFG A RVK ++ + GT ++APE+I K Y+ D ++
Sbjct: 154 KPENLLIDQQGYIQVTDFGFAKRVKGRTWTL---CGTPEYLAPEIILSKGYNKAVDWWAL 210
Query: 476 GIVLWELLTGKLPYEYLTPLQAAVGVV 502
G++++E+ G P+ P+Q +V
Sbjct: 211 GVLIYEMAAGYPPFFADQPIQIYEKIV 237
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 107/207 (51%), Gaps = 8/207 (3%)
Query: 300 VASGSYGD--LYRGTYCSQDVAIKVLKPERINSDMQKEFA-QEVFIMRKVRHKNVVQFIG 356
+ +GS+G L + A+K+L +++ Q E E I++ V +V+
Sbjct: 49 LGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEY 108
Query: 357 ACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDL 416
+ +L +V E++ GG ++ +L ++ G F P A + YLH ++I+RDL
Sbjct: 109 SFKDNSNLYMVMEYVPGGEMFSHLRRI-GRFSEPHARFYAAQIVLTFEYLHSLDLIYRDL 167
Query: 417 KAANLLMDENEVVKVADFGVA-RVKAQSGVMTAETGTYRWMAPEVIEHKPYDHKADVFSF 475
K NLL+D+ ++V DFG A RVK ++ + GT ++APE+I K Y+ D ++
Sbjct: 168 KPENLLIDQQGYIQVTDFGFAKRVKGRTWXL---CGTPEYLAPEIILSKGYNKAVDWWAL 224
Query: 476 GIVLWELLTGKLPYEYLTPLQAAVGVV 502
G++++E+ G P+ P+Q +V
Sbjct: 225 GVLIYEMAAGYPPFFADQPIQIYEKIV 251
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 107/207 (51%), Gaps = 8/207 (3%)
Query: 300 VASGSYGD--LYRGTYCSQDVAIKVLKPERINSDMQKEFA-QEVFIMRKVRHKNVVQFIG 356
+ +GS+G L + A+K+L +++ Q E E I++ V +V+
Sbjct: 49 LGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEY 108
Query: 357 ACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDL 416
+ +L +V E++ GG ++ +L ++ G F P A + YLH ++I+RDL
Sbjct: 109 SFKDNSNLYMVMEYVPGGEMFSHLRRI-GRFSEPHARFYAAQIVLTFEYLHSLDLIYRDL 167
Query: 417 KAANLLMDENEVVKVADFGVA-RVKAQSGVMTAETGTYRWMAPEVIEHKPYDHKADVFSF 475
K NLL+D+ ++V DFG A RVK ++ + GT ++APE+I K Y+ D ++
Sbjct: 168 KPENLLIDQQGYIQVTDFGFAKRVKGRTWXL---CGTPEYLAPEIILSKGYNKAVDWWAL 224
Query: 476 GIVLWELLTGKLPYEYLTPLQAAVGVV 502
G++++E+ G P+ P+Q +V
Sbjct: 225 GVLIYEMAAGYPPFFADQPIQIYEKIV 251
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 107/207 (51%), Gaps = 8/207 (3%)
Query: 300 VASGSYGD--LYRGTYCSQDVAIKVLKPERINSDMQKEFA-QEVFIMRKVRHKNVVQFIG 356
+ +GS+G L + A+K+L +++ Q E E I++ V +V+
Sbjct: 49 LGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEY 108
Query: 357 ACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDL 416
+ +L +V E++ GG ++ +L ++ G F P A + YLH ++I+RDL
Sbjct: 109 SFKDNSNLYMVMEYVPGGEMFSHLRRI-GRFSEPHARFYAAQIVLTFEYLHSLDLIYRDL 167
Query: 417 KAANLLMDENEVVKVADFGVA-RVKAQSGVMTAETGTYRWMAPEVIEHKPYDHKADVFSF 475
K NLL+D+ ++V DFG A RVK ++ + GT ++APE+I K Y+ D ++
Sbjct: 168 KPENLLIDQQGYIQVTDFGFAKRVKGRTWXL---CGTPEYLAPEIILSKGYNKAVDWWAL 224
Query: 476 GIVLWELLTGKLPYEYLTPLQAAVGVV 502
G++++E+ G P+ P+Q +V
Sbjct: 225 GVLIYEMAAGYPPFFADQPIQIYEKIV 251
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 107/207 (51%), Gaps = 8/207 (3%)
Query: 300 VASGSYGD--LYRGTYCSQDVAIKVLKPERINSDMQKEFA-QEVFIMRKVRHKNVVQFIG 356
+ +GS+G L + A+K+L +++ Q E E I++ V +V+
Sbjct: 49 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 357 ACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDL 416
+ +L +V E++ GG ++ +L ++ G F P A + YLH ++I+RDL
Sbjct: 109 SFKDNSNLYMVMEYVPGGEMFSHLRRI-GRFXEPHARFYAAQIVLTFEYLHSLDLIYRDL 167
Query: 417 KAANLLMDENEVVKVADFGVA-RVKAQSGVMTAETGTYRWMAPEVIEHKPYDHKADVFSF 475
K NLL+D+ ++V DFG A RVK ++ + GT ++APE+I K Y+ D ++
Sbjct: 168 KPENLLIDQQGYIQVTDFGFAKRVKGRTWXL---CGTPEYLAPEIILSKGYNKAVDWWAL 224
Query: 476 GIVLWELLTGKLPYEYLTPLQAAVGVV 502
G++++E+ G P+ P+Q +V
Sbjct: 225 GVLIYEMAAGYPPFFADQPIQIYEKIV 251
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 106/207 (51%), Gaps = 8/207 (3%)
Query: 300 VASGSYGD--LYRGTYCSQDVAIKVLKPERINSDMQKEFA-QEVFIMRKVRHKNVVQFIG 356
+ +GS+G L + A+K+L +++ Q E E I++ V +V+
Sbjct: 49 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 357 ACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDL 416
+ +L +V E+ GG ++ +L ++ G F P A + YLH ++I+RDL
Sbjct: 109 SFKDNSNLYMVMEYAPGGEMFSHLRRI-GRFSEPHARFYAAQIVLTFEYLHSLDLIYRDL 167
Query: 417 KAANLLMDENEVVKVADFGVA-RVKAQSGVMTAETGTYRWMAPEVIEHKPYDHKADVFSF 475
K NL++D+ +KV DFG A RVK ++ + GT ++APE+I K Y+ D ++
Sbjct: 168 KPENLMIDQQGYIKVTDFGFAKRVKGRTWXL---CGTPEYLAPEIILSKGYNKAVDWWAL 224
Query: 476 GIVLWELLTGKLPYEYLTPLQAAVGVV 502
G++++E+ G P+ P+Q +V
Sbjct: 225 GVLIYEMAAGYPPFFADQPIQIYEKIV 251
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 107/207 (51%), Gaps = 8/207 (3%)
Query: 300 VASGSYGD--LYRGTYCSQDVAIKVLKPERINSDMQKEFA-QEVFIMRKVRHKNVVQFIG 356
+ +GS+G L + A+K+L +++ Q E E I++ V +V+
Sbjct: 49 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 357 ACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDL 416
+ +L +V E++ GG ++ +L ++ G F P A + YLH ++I+RDL
Sbjct: 109 SFKDNSNLYMVMEYVPGGEMFSHLRRI-GRFSEPHARFYAAQIVLTFEYLHSLDLIYRDL 167
Query: 417 KAANLLMDENEVVKVADFGVA-RVKAQSGVMTAETGTYRWMAPEVIEHKPYDHKADVFSF 475
K NLL+D+ ++V DFG A RVK ++ + GT ++APE+I K Y+ D ++
Sbjct: 168 KPENLLIDQQGYIQVTDFGFAKRVKGRTWXL---CGTPEYLAPEIILSKGYNKAVDWWAL 224
Query: 476 GIVLWELLTGKLPYEYLTPLQAAVGVV 502
G++++E+ G P+ P+Q +V
Sbjct: 225 GVLIYEMAAGYPPFFADQPIQIYEKIV 251
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 107/207 (51%), Gaps = 8/207 (3%)
Query: 300 VASGSYGD--LYRGTYCSQDVAIKVLKPERINSDMQKEFA-QEVFIMRKVRHKNVVQFIG 356
+ +GS+G L + A+K+L +++ Q E E I++ V +V+
Sbjct: 49 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 357 ACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDL 416
+ +L +V E++ GG ++ +L ++ G F P A + YLH ++I+RDL
Sbjct: 109 SFKDNSNLYMVMEYVPGGEMFSHLRRI-GRFSEPHARFYAAQIVLTFEYLHSLDLIYRDL 167
Query: 417 KAANLLMDENEVVKVADFGVA-RVKAQSGVMTAETGTYRWMAPEVIEHKPYDHKADVFSF 475
K NLL+D+ ++V DFG A RVK ++ + GT ++APE+I K Y+ D ++
Sbjct: 168 KPENLLIDQQGYIQVTDFGFAKRVKGRTWXL---CGTPEYLAPEIILSKGYNKAVDWWAL 224
Query: 476 GIVLWELLTGKLPYEYLTPLQAAVGVV 502
G++++E+ G P+ P+Q +V
Sbjct: 225 GVLIYEMAAGYPPFFADQPIQIYEKIV 251
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 107/207 (51%), Gaps = 8/207 (3%)
Query: 300 VASGSYGD--LYRGTYCSQDVAIKVLKPERINSDMQKEFA-QEVFIMRKVRHKNVVQFIG 356
+ +GS+G L + A+K+L +++ Q E E I++ V +V+
Sbjct: 50 LGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 109
Query: 357 ACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDL 416
+ +L +V E++ GG ++ +L ++ G F P A + YLH ++I+RDL
Sbjct: 110 SFKDNSNLYMVMEYVPGGEMFSHLRRI-GRFSEPHARFYAAQIVLTFEYLHSLDLIYRDL 168
Query: 417 KAANLLMDENEVVKVADFGVA-RVKAQSGVMTAETGTYRWMAPEVIEHKPYDHKADVFSF 475
K NLL+D+ ++V DFG A RVK ++ + GT ++APE+I K Y+ D ++
Sbjct: 169 KPENLLIDQQGYIQVTDFGFAKRVKGRTWXL---CGTPEYLAPEIILSKGYNKAVDWWAL 225
Query: 476 GIVLWELLTGKLPYEYLTPLQAAVGVV 502
G++++E+ G P+ P+Q +V
Sbjct: 226 GVLIYEMAAGYPPFFADQPIQIYEKIV 252
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 107/207 (51%), Gaps = 8/207 (3%)
Query: 300 VASGSYGD--LYRGTYCSQDVAIKVLKPERINSDMQKEFA-QEVFIMRKVRHKNVVQFIG 356
+ +GS+G L + A+K+L +++ Q E E I++ V +V+
Sbjct: 49 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 357 ACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDL 416
+ +L +V E++ GG ++ +L ++ G F P A + YLH ++I+RDL
Sbjct: 109 SFKDNSNLYMVMEYVPGGEMFSHLRRI-GRFSEPHARFYAAQIVLTFEYLHSLDLIYRDL 167
Query: 417 KAANLLMDENEVVKVADFGVA-RVKAQSGVMTAETGTYRWMAPEVIEHKPYDHKADVFSF 475
K NLL+D+ ++V DFG A RVK ++ + GT ++APE+I K Y+ D ++
Sbjct: 168 KPENLLIDQQGYIQVTDFGFAKRVKGRTWXL---CGTPEYLAPEIILSKGYNKAVDWWAL 224
Query: 476 GIVLWELLTGKLPYEYLTPLQAAVGVV 502
G++++E+ G P+ P+Q +V
Sbjct: 225 GVLIYEMAAGYPPFFADQPIQIYEKIV 251
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 107/207 (51%), Gaps = 8/207 (3%)
Query: 300 VASGSYGD--LYRGTYCSQDVAIKVLKPERINSDMQKEFA-QEVFIMRKVRHKNVVQFIG 356
+ +GS+G L + A+K+L +++ Q E E I++ V +V+
Sbjct: 49 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 357 ACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDL 416
+ +L +V E++ GG ++ +L ++ G F P A + YLH ++I+RDL
Sbjct: 109 SFKDNSNLYMVMEYVPGGEMFSHLRRI-GRFXEPHARFYAAQIVLTFEYLHSLDLIYRDL 167
Query: 417 KAANLLMDENEVVKVADFGVA-RVKAQSGVMTAETGTYRWMAPEVIEHKPYDHKADVFSF 475
K NLL+D+ ++V DFG A RVK ++ + GT ++APE+I K Y+ D ++
Sbjct: 168 KPENLLIDQQGYIQVTDFGFAKRVKGRTWXL---CGTPEYLAPEIILSKGYNKAVDWWAL 224
Query: 476 GIVLWELLTGKLPYEYLTPLQAAVGVV 502
G++++E+ G P+ P+Q +V
Sbjct: 225 GVLIYEMAAGYPPFFADQPIQIYEKIV 251
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 107/207 (51%), Gaps = 8/207 (3%)
Query: 300 VASGSYGD--LYRGTYCSQDVAIKVLKPERINSDMQKEFA-QEVFIMRKVRHKNVVQFIG 356
+ +GS+G L + A+K+L +++ Q E E I++ V +V+
Sbjct: 70 LGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 129
Query: 357 ACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDL 416
+ +L +V E++ GG ++ +L ++ G F P A + YLH ++I+RDL
Sbjct: 130 SFKDNSNLYMVMEYVPGGEMFSHLRRI-GRFSEPHARFYAAQIVLTFEYLHSLDLIYRDL 188
Query: 417 KAANLLMDENEVVKVADFGVA-RVKAQSGVMTAETGTYRWMAPEVIEHKPYDHKADVFSF 475
K NLL+D+ ++V DFG A RVK ++ + GT ++APE+I K Y+ D ++
Sbjct: 189 KPENLLIDQQGYIQVTDFGFAKRVKGRTWXL---CGTPEYLAPEIILSKGYNKAVDWWAL 245
Query: 476 GIVLWELLTGKLPYEYLTPLQAAVGVV 502
G++++E+ G P+ P+Q +V
Sbjct: 246 GVLIYEMAAGYPPFFADQPIQIYEKIV 272
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 107/207 (51%), Gaps = 8/207 (3%)
Query: 300 VASGSYGD--LYRGTYCSQDVAIKVLKPERINSDMQKEFA-QEVFIMRKVRHKNVVQFIG 356
+ +GS+G L + A+K+L +++ Q E E I++ V +V+
Sbjct: 42 LGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 101
Query: 357 ACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDL 416
+ +L +V E++ GG ++ +L ++ G F P A + YLH ++I+RDL
Sbjct: 102 SFKDNSNLYMVMEYVPGGEMFSHLRRI-GRFSEPHARFYAAQIVLTFEYLHSLDLIYRDL 160
Query: 417 KAANLLMDENEVVKVADFGVA-RVKAQSGVMTAETGTYRWMAPEVIEHKPYDHKADVFSF 475
K NLL+D+ ++V DFG A RVK ++ + GT ++APE+I K Y+ D ++
Sbjct: 161 KPENLLIDQQGYIQVTDFGFAKRVKGRTWXL---CGTPEYLAPEIILSKGYNKAVDWWAL 217
Query: 476 GIVLWELLTGKLPYEYLTPLQAAVGVV 502
G++++E+ G P+ P+Q +V
Sbjct: 218 GVLIYEMAAGYPPFFADQPIQIYEKIV 244
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 107/207 (51%), Gaps = 8/207 (3%)
Query: 300 VASGSYGD--LYRGTYCSQDVAIKVLKPERINSDMQKEFA-QEVFIMRKVRHKNVVQFIG 356
+ +GS+G L + A+K+L +++ Q E E I++ V +V+
Sbjct: 50 LGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 109
Query: 357 ACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDL 416
+ +L +V E++ GG ++ +L ++ G F P A + YLH ++I+RDL
Sbjct: 110 SFKDNSNLYMVMEYVPGGEMFSHLRRI-GRFSEPHARFYAAQIVLTFEYLHSLDLIYRDL 168
Query: 417 KAANLLMDENEVVKVADFGVA-RVKAQSGVMTAETGTYRWMAPEVIEHKPYDHKADVFSF 475
K NLL+D+ ++V DFG A RVK ++ + GT ++APE+I K Y+ D ++
Sbjct: 169 KPENLLIDQQGYIQVTDFGFAKRVKGRTWXL---CGTPEYLAPEIILSKGYNKAVDWWAL 225
Query: 476 GIVLWELLTGKLPYEYLTPLQAAVGVV 502
G++++E+ G P+ P+Q +V
Sbjct: 226 GVLIYEMAAGYPPFFADQPIQIYEKIV 252
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 107/207 (51%), Gaps = 8/207 (3%)
Query: 300 VASGSYGD--LYRGTYCSQDVAIKVLKPERINSDMQKEFA-QEVFIMRKVRHKNVVQFIG 356
+ +GS+G L + A+K+L +++ Q E E I++ V +V+
Sbjct: 50 LGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 109
Query: 357 ACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDL 416
+ +L +V E++ GG ++ +L ++ G F P A + YLH ++I+RDL
Sbjct: 110 SFKDNSNLYMVMEYVPGGEMFSHLRRI-GRFSEPHARFYAAQIVLTFEYLHSLDLIYRDL 168
Query: 417 KAANLLMDENEVVKVADFGVA-RVKAQSGVMTAETGTYRWMAPEVIEHKPYDHKADVFSF 475
K NLL+D+ ++V DFG A RVK ++ + GT ++APE+I K Y+ D ++
Sbjct: 169 KPENLLIDQQGYIQVTDFGFAKRVKGRTWXL---CGTPEYLAPEIILSKGYNKAVDWWAL 225
Query: 476 GIVLWELLTGKLPYEYLTPLQAAVGVV 502
G++++E+ G P+ P+Q +V
Sbjct: 226 GVLIYEMAAGYPPFFADQPIQIYEKIV 252
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 107/207 (51%), Gaps = 8/207 (3%)
Query: 300 VASGSYGD--LYRGTYCSQDVAIKVLKPERINSDMQKEFA-QEVFIMRKVRHKNVVQFIG 356
+ +GS+G L + A+K+L +++ Q E E I++ V +V+
Sbjct: 50 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 109
Query: 357 ACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDL 416
+ +L +V E++ GG ++ +L ++ G F P A + YLH ++I+RDL
Sbjct: 110 SFKDNSNLYMVMEYVPGGEMFSHLRRI-GRFSEPHARFYAAQIVLTFEYLHSLDLIYRDL 168
Query: 417 KAANLLMDENEVVKVADFGVA-RVKAQSGVMTAETGTYRWMAPEVIEHKPYDHKADVFSF 475
K NLL+D+ ++V DFG A RVK ++ + GT ++APE+I K Y+ D ++
Sbjct: 169 KPENLLIDQQGYIQVTDFGFAKRVKGRTWXL---CGTPEYLAPEIILSKGYNKAVDWWAL 225
Query: 476 GIVLWELLTGKLPYEYLTPLQAAVGVV 502
G++++E+ G P+ P+Q +V
Sbjct: 226 GVLIYEMAAGYPPFFADQPIQIYEKIV 252
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 107/207 (51%), Gaps = 8/207 (3%)
Query: 300 VASGSYGD--LYRGTYCSQDVAIKVLKPERINSDMQKEFA-QEVFIMRKVRHKNVVQFIG 356
+ +GS+G L + A+K+L +++ Q E E I++ V +V+
Sbjct: 42 LGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 101
Query: 357 ACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDL 416
+ +L +V E++ GG ++ +L ++ G F P A + YLH ++I+RDL
Sbjct: 102 SFKDNSNLYMVMEYVPGGEMFSHLRRI-GRFXEPHARFYAAQIVLTFEYLHSLDLIYRDL 160
Query: 417 KAANLLMDENEVVKVADFGVA-RVKAQSGVMTAETGTYRWMAPEVIEHKPYDHKADVFSF 475
K NLL+D+ ++V DFG A RVK ++ + GT ++APE+I K Y+ D ++
Sbjct: 161 KPENLLIDQQGYIQVTDFGFAKRVKGRTWXL---CGTPEYLAPEIILSKGYNKAVDWWAL 217
Query: 476 GIVLWELLTGKLPYEYLTPLQAAVGVV 502
G++++E+ G P+ P+Q +V
Sbjct: 218 GVLIYEMAAGYPPFFADQPIQIYEKIV 244
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 106/207 (51%), Gaps = 8/207 (3%)
Query: 300 VASGSYGD--LYRGTYCSQDVAIKVLKPERINSDMQKEFA-QEVFIMRKVRHKNVVQFIG 356
+ +GS+G L + A+K+L +++ Q E E I++ V +V+
Sbjct: 50 LGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 109
Query: 357 ACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDL 416
+ +L +V E+ GG ++ +L ++ G F P A + YLH ++I+RDL
Sbjct: 110 SFKDNSNLYMVMEYAPGGEMFSHLRRI-GRFSEPHARFYAAQIVLTFEYLHSLDLIYRDL 168
Query: 417 KAANLLMDENEVVKVADFGVA-RVKAQSGVMTAETGTYRWMAPEVIEHKPYDHKADVFSF 475
K NL++D+ +KV DFG A RVK ++ + GT ++APE+I K Y+ D ++
Sbjct: 169 KPENLMIDQQGYIKVTDFGFAKRVKGRTWXL---CGTPEYLAPEIILSKGYNKAVDWWAL 225
Query: 476 GIVLWELLTGKLPYEYLTPLQAAVGVV 502
G++++E+ G P+ P+Q +V
Sbjct: 226 GVLIYEMAAGYPPFFADQPIQIYEKIV 252
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 107/207 (51%), Gaps = 8/207 (3%)
Query: 300 VASGSYGD--LYRGTYCSQDVAIKVLKPERINSDMQKEFA-QEVFIMRKVRHKNVVQFIG 356
+ +GS+G L + A+K+L +++ Q E E I++ V +V+
Sbjct: 50 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 109
Query: 357 ACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDL 416
+ +L +V E++ GG ++ +L ++ G F P A + YLH ++I+RDL
Sbjct: 110 SFKDNSNLYMVMEYVPGGEMFSHLRRI-GRFXEPHARFYAAQIVLTFEYLHSLDLIYRDL 168
Query: 417 KAANLLMDENEVVKVADFGVA-RVKAQSGVMTAETGTYRWMAPEVIEHKPYDHKADVFSF 475
K NLL+D+ ++V DFG A RVK ++ + GT ++APE+I K Y+ D ++
Sbjct: 169 KPENLLIDQQGYIQVTDFGFAKRVKGRTWXL---CGTPEYLAPEIILSKGYNKAVDWWAL 225
Query: 476 GIVLWELLTGKLPYEYLTPLQAAVGVV 502
G++++E+ G P+ P+Q +V
Sbjct: 226 GVLIYEMAAGYPPFFADQPIQIYEKIV 252
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 106/207 (51%), Gaps = 8/207 (3%)
Query: 300 VASGSYGD--LYRGTYCSQDVAIKVLKPERINSDMQKEFA-QEVFIMRKVRHKNVVQFIG 356
+ +GS+G L + A+K+L +++ Q E E I++ V +V+
Sbjct: 49 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 357 ACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDL 416
+ +L +V E+ GG ++ +L ++ G F P A + YLH ++I+RDL
Sbjct: 109 SFKDNSNLYMVMEYAPGGEMFSHLRRI-GRFXEPHARFYAAQIVLTFEYLHSLDLIYRDL 167
Query: 417 KAANLLMDENEVVKVADFGVA-RVKAQSGVMTAETGTYRWMAPEVIEHKPYDHKADVFSF 475
K NL++D+ +KV DFG A RVK ++ + GT ++APE+I K Y+ D ++
Sbjct: 168 KPENLMIDQQGYIKVTDFGFAKRVKGRTWXL---CGTPEYLAPEIILSKGYNKAVDWWAL 224
Query: 476 GIVLWELLTGKLPYEYLTPLQAAVGVV 502
G++++E+ G P+ P+Q +V
Sbjct: 225 GVLIYEMAAGYPPFFADQPIQIYEKIV 251
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 107/198 (54%), Gaps = 10/198 (5%)
Query: 300 VASGSYGD--LYRGTYCSQDVAIKVLKPERINSDMQKEFAQ-EVFIMRKVRHKNVVQFIG 356
+ GSY L R + A+KV+K E +N D ++ Q E + + + + +
Sbjct: 13 IGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLH 72
Query: 357 ACTKPPS-LCIVTEFMSGGSVYDYLHKLKGVFKLPS--LLKVAIDVSKGMNYLHQNNIIH 413
+C + S L V E+++GG + ++ + + KLP + ++S +NYLH+ II+
Sbjct: 73 SCFQTESRLFFVIEYVNGGDLMFHMQRQR---KLPEEHARFYSAEISLALNYLHERGIIY 129
Query: 414 RDLKAANLLMDENEVVKVADFGVARVKAQSGVMTAE-TGTYRWMAPEVIEHKPYDHKADV 472
RDLK N+L+D +K+ D+G+ + + G T+ GT ++APE++ + Y D
Sbjct: 130 RDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSXFCGTPNYIAPEILRGEDYGFSVDW 189
Query: 473 FSFGIVLWELLTGKLPYE 490
++ G++++E++ G+ P++
Sbjct: 190 WALGVLMFEMMAGRSPFD 207
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 107/198 (54%), Gaps = 10/198 (5%)
Query: 300 VASGSYGD--LYRGTYCSQDVAIKVLKPERINSDMQKEFAQ-EVFIMRKVRHKNVVQFIG 356
+ GSY L R + A+KV+K E +N D ++ Q E + + + + +
Sbjct: 17 IGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLH 76
Query: 357 ACTKPPS-LCIVTEFMSGGSVYDYLHKLKGVFKLPS--LLKVAIDVSKGMNYLHQNNIIH 413
+C + S L V E+++GG + ++ + + KLP + ++S +NYLH+ II+
Sbjct: 77 SCFQTESRLFFVIEYVNGGDLMFHMQRQR---KLPEEHARFYSAEISLALNYLHERGIIY 133
Query: 414 RDLKAANLLMDENEVVKVADFGVARVKAQSGVMTAE-TGTYRWMAPEVIEHKPYDHKADV 472
RDLK N+L+D +K+ D+G+ + + G T+ GT ++APE++ + Y D
Sbjct: 134 RDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSXFCGTPNYIAPEILRGEDYGFSVDW 193
Query: 473 FSFGIVLWELLTGKLPYE 490
++ G++++E++ G+ P++
Sbjct: 194 WALGVLMFEMMAGRSPFD 211
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 102/200 (51%), Gaps = 16/200 (8%)
Query: 298 SKVASGSYGDLYRGTYCSQD-----VAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVV 352
S++ G+ +YR C Q A+KVLK + +K E+ ++ ++ H N++
Sbjct: 59 SELGRGATSIVYR---CKQKGTQKPYALKVLK----KTVDKKIVRTEIGVLLRLSHPNII 111
Query: 353 QFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNII 412
+ P + +V E ++GG ++D + + KG + + + + YLH+N I+
Sbjct: 112 KLKEIFETPTEISLVLELVTGGELFDRIVE-KGYYSERDAADAVKQILEAVAYLHENGIV 170
Query: 413 HRDLKAANLLMDE---NEVVKVADFGVARVKAQSGVMTAETGTYRWMAPEVIEHKPYDHK 469
HRDLK NLL + +K+ADFG++++ +M GT + APE++ Y +
Sbjct: 171 HRDLKPENLLYATPAPDAPLKIADFGLSKIVEHQVLMKTVCGTPGYCAPEILRGCAYGPE 230
Query: 470 ADVFSFGIVLWELLTGKLPY 489
D++S GI+ + LL G P+
Sbjct: 231 VDMWSVGIITYILLCGFEPF 250
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 103/209 (49%), Gaps = 8/209 (3%)
Query: 289 IDPKHLKF---GSKVASGSYGDLYRGTY--CSQDVAIKVLKPERINSDMQKE-FAQEVFI 342
+DP+ +K G + G + Y T + A KV+ + QKE + E+ I
Sbjct: 36 VDPRTMKRYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAI 95
Query: 343 MRKVRHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKG 402
+ + + +VV F G + +V E S+ + LHK + P +G
Sbjct: 96 HKSLDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLE-LHKRRKAVTEPEARYFMRQTIQG 154
Query: 403 MNYLHQNNIIHRDLKAANLLMDENEVVKVADFGVA-RVKAQSGVMTAETGTYRWMAPEVI 461
+ YLH N +IHRDLK NL ++++ VK+ DFG+A +++ GT ++APEV+
Sbjct: 155 VQYLHNNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKTLCGTPNYIAPEVL 214
Query: 462 EHKPYDHKADVFSFGIVLWELLTGKLPYE 490
K + + D++S G +L+ LL GK P+E
Sbjct: 215 CKKGHSFEVDIWSLGCILYTLLVGKPPFE 243
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 108/207 (52%), Gaps = 8/207 (3%)
Query: 300 VASGSYGD--LYRGTYCSQDVAIKVLKPERINSDMQKEFA-QEVFIMRKVRHKNVVQFIG 356
+ +GS+G L + A+K+L +++ Q E E I++ V +V+
Sbjct: 49 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 357 ACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDL 416
+ +L +V E+++GG ++ +L ++ G F P A + YLH ++I+RDL
Sbjct: 109 SFKDNSNLYMVMEYVAGGEMFSHLRRI-GRFSEPHARFYAAQIVLTFEYLHSLDLIYRDL 167
Query: 417 KAANLLMDENEVVKVADFGVA-RVKAQSGVMTAETGTYRWMAPEVIEHKPYDHKADVFSF 475
K NL++D+ ++V DFG A RVK ++ + GT ++APE+I K Y+ D ++
Sbjct: 168 KPENLIIDQQGYIQVTDFGFAKRVKGRTWXL---CGTPEYLAPEIIISKGYNKAVDWWAL 224
Query: 476 GIVLWELLTGKLPYEYLTPLQAAVGVV 502
G++++E+ G P+ P+Q +V
Sbjct: 225 GVLIYEMAAGYPPFFADQPIQIYEKIV 251
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 107/198 (54%), Gaps = 10/198 (5%)
Query: 300 VASGSYGD--LYRGTYCSQDVAIKVLKPERINSDMQKEFAQ-EVFIMRKVRHKNVVQFIG 356
+ GSY L R + A+KV+K E +N D ++ Q E + + + + +
Sbjct: 28 IGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLH 87
Query: 357 ACTKPPS-LCIVTEFMSGGSVYDYLHKLKGVFKLPS--LLKVAIDVSKGMNYLHQNNIIH 413
+C + S L V E+++GG + ++ + + KLP + ++S +NYLH+ II+
Sbjct: 88 SCFQTESRLFFVIEYVNGGDLMFHMQRQR---KLPEEHARFYSAEISLALNYLHERGIIY 144
Query: 414 RDLKAANLLMDENEVVKVADFGVARVKAQSGVMTAE-TGTYRWMAPEVIEHKPYDHKADV 472
RDLK N+L+D +K+ D+G+ + + G T+ GT ++APE++ + Y D
Sbjct: 145 RDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSXFCGTPNYIAPEILRGEDYGFSVDW 204
Query: 473 FSFGIVLWELLTGKLPYE 490
++ G++++E++ G+ P++
Sbjct: 205 WALGVLMFEMMAGRSPFD 222
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 83/150 (55%), Gaps = 1/150 (0%)
Query: 342 IMRKVRHKNVVQFIGACTKPPSLCIVTEFMSGGSV-YDYLHKLKGVFKLPSLLKVAIDVS 400
I+ KV + VV A +LC+V M+GG + + H + F + A ++
Sbjct: 237 ILEKVNSRFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEIC 296
Query: 401 KGMNYLHQNNIIHRDLKAANLLMDENEVVKVADFGVARVKAQSGVMTAETGTYRWMAPEV 460
G+ LH+ I++RDLK N+L+D++ ++++D G+A + + GT +MAPEV
Sbjct: 297 CGLEDLHRERIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQTIKGRVGTVGYMAPEV 356
Query: 461 IEHKPYDHKADVFSFGIVLWELLTGKLPYE 490
++++ Y D ++ G +L+E++ G+ P++
Sbjct: 357 VKNERYTFSPDWWALGCLLYEMIAGQSPFQ 386
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 85.9 bits (211), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 108/211 (51%), Gaps = 13/211 (6%)
Query: 290 DPKHLKFGSKVASGSYGDLYRGTYCSQDVAIKVLKPERINSDMQKEFAQ----EVFIMRK 345
DPK + G V+S ++R T V I + ER++ + +E + E I+R+
Sbjct: 97 DPKDV-IGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQ 155
Query: 346 VR-HKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMN 404
V H +++ I + + +V + M G ++DYL + K + + + ++
Sbjct: 156 VAGHPHIITLIDSYESSSFMFLVFDLMRKGELFDYLTE-KVALSEKETRSIMRSLLEAVS 214
Query: 405 YLHQNNIIHRDLKAANLLMDENEVVKVADFGVARVKAQSGVMTAETGTYRWMAPEVIE-- 462
+LH NNI+HRDLK N+L+D+N ++++DFG + + GT ++APE+++
Sbjct: 215 FLHANNIVHRDLKPENILLDDNMQIRLSDFGFSCHLEPGEKLRELCGTPGYLAPEILKCS 274
Query: 463 ----HKPYDHKADVFSFGIVLWELLTGKLPY 489
H Y + D+++ G++L+ LL G P+
Sbjct: 275 MDETHPGYGKEVDLWACGVILFTLLAGSPPF 305
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 85.9 bits (211), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 108/207 (52%), Gaps = 8/207 (3%)
Query: 300 VASGSYGD--LYRGTYCSQDVAIKVLKPERINSDMQKEFA-QEVFIMRKVRHKNVVQFIG 356
+ +GS+G L + A+K+L +++ Q E E I++ V +V+
Sbjct: 49 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 357 ACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDL 416
+ +L +V E+++GG ++ +L ++ G F P A + YLH ++I+RDL
Sbjct: 109 SFKDNSNLYMVMEYVAGGEMFSHLRRI-GRFSEPHARFYAAQIVLTFEYLHSLDLIYRDL 167
Query: 417 KAANLLMDENEVVKVADFGVA-RVKAQSGVMTAETGTYRWMAPEVIEHKPYDHKADVFSF 475
K NLL+D+ ++V DFG A RVK ++ + GT ++APE+I K Y+ D ++
Sbjct: 168 KPENLLIDQQGYIQVTDFGFAKRVKGRTWXL---CGTPEYLAPEIILSKGYNKAVDWWAL 224
Query: 476 GIVLWELLTGKLPYEYLTPLQAAVGVV 502
G++++++ G P+ P+Q +V
Sbjct: 225 GVLIYQMAAGYPPFFADQPIQIYEKIV 251
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 85.9 bits (211), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 83/150 (55%), Gaps = 1/150 (0%)
Query: 342 IMRKVRHKNVVQFIGACTKPPSLCIVTEFMSGGSV-YDYLHKLKGVFKLPSLLKVAIDVS 400
I+ KV + VV A +LC+V M+GG + + H + F + A ++
Sbjct: 237 ILEKVNSRFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEIC 296
Query: 401 KGMNYLHQNNIIHRDLKAANLLMDENEVVKVADFGVARVKAQSGVMTAETGTYRWMAPEV 460
G+ LH+ I++RDLK N+L+D++ ++++D G+A + + GT +MAPEV
Sbjct: 297 CGLEDLHRERIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQTIKGRVGTVGYMAPEV 356
Query: 461 IEHKPYDHKADVFSFGIVLWELLTGKLPYE 490
++++ Y D ++ G +L+E++ G+ P++
Sbjct: 357 VKNERYTFSPDWWALGCLLYEMIAGQSPFQ 386
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 85.9 bits (211), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 103/209 (49%), Gaps = 8/209 (3%)
Query: 289 IDPKHLKF---GSKVASGSYGDLYRGTY--CSQDVAIKVLKPERINSDMQKE-FAQEVFI 342
+DP+ +K G + G + Y T + A KV+ + QKE + E+ I
Sbjct: 36 VDPRTMKRYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAI 95
Query: 343 MRKVRHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKG 402
+ + + +VV F G + +V E S+ + LHK + P +G
Sbjct: 96 HKSLDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLE-LHKRRKAVTEPEARYFMRQTIQG 154
Query: 403 MNYLHQNNIIHRDLKAANLLMDENEVVKVADFGVA-RVKAQSGVMTAETGTYRWMAPEVI 461
+ YLH N +IHRDLK NL ++++ VK+ DFG+A +++ GT ++APEV+
Sbjct: 155 VQYLHNNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKXLCGTPNYIAPEVL 214
Query: 462 EHKPYDHKADVFSFGIVLWELLTGKLPYE 490
K + + D++S G +L+ LL GK P+E
Sbjct: 215 CKKGHSFEVDIWSLGCILYTLLVGKPPFE 243
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 85.5 bits (210), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 107/207 (51%), Gaps = 8/207 (3%)
Query: 300 VASGSYGD--LYRGTYCSQDVAIKVLKPERINSDMQKEFA-QEVFIMRKVRHKNVVQFIG 356
+ +GS+G L + A+K+L +++ + E E I++ V +V+
Sbjct: 49 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKEIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 357 ACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDL 416
+ +L +V E+ GG ++ +L ++ G F P A + YLH ++I+RDL
Sbjct: 109 SFKDNSNLYMVMEYAPGGEMFSHLRRI-GRFSEPHARFYAAQIVLTFEYLHSLDLIYRDL 167
Query: 417 KAANLLMDENEVVKVADFGVA-RVKAQSGVMTAETGTYRWMAPEVIEHKPYDHKADVFSF 475
K NL++D+ +KV DFG+A RVK ++ + GT ++APE+I K Y+ D ++
Sbjct: 168 KPENLMIDQQGYIKVTDFGLAKRVKGRTWXL---CGTPEYLAPEIILSKGYNKAVDWWAL 224
Query: 476 GIVLWELLTGKLPYEYLTPLQAAVGVV 502
G++++E+ G P+ P+Q +V
Sbjct: 225 GVLIYEMAAGYPPFFADQPIQIYEKIV 251
>pdb|3MY0|A Chain A, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|B Chain B, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|C Chain C, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|D Chain D, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|E Chain E, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|F Chain F, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|G Chain G, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|H Chain H, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|I Chain I, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|J Chain J, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|K Chain K, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|L Chain L, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|M Chain M, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|N Chain N, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|O Chain O, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|P Chain P, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|Q Chain Q, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|R Chain R, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|S Chain S, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|T Chain T, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|U Chain U, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|V Chain V, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|W Chain W, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|X Chain X, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
Length = 305
Score = 85.5 bits (210), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 103/207 (49%), Gaps = 30/207 (14%)
Query: 300 VASGSYGDLYRGTYCSQDVAIKVLKPERINSDMQKEFAQ-EVFIMRKVRHKNVVQFIGA- 357
V G YG+++RG + + VA+K+ + D Q F + E++ +RH N++ FI +
Sbjct: 16 VGKGRYGEVWRGLWHGESVAVKIFS----SRDEQSWFRETEIYNTVLLRHDNILGFIASD 71
Query: 358 ---CTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLH------- 407
L ++T + GS+YD+L + + L++A+ + G+ +LH
Sbjct: 72 MTSRNSSTQLWLITHYHEHGSLYDFLQR--QTLEPHLALRLAVSAACGLAHLHVEIFGTQ 129
Query: 408 -QNNIIHRDLKAANLLMDENEVVKVADFGVARVKAQSGVM-----TAETGTYRWMAPEVI 461
+ I HRD K+ N+L+ N +AD G+A + +Q GT R+MAPEV+
Sbjct: 130 GKPAIAHRDFKSRNVLVKSNLQCCIADLGLAVMHSQGSDYLDIGNNPRVGTKRYMAPEVL 189
Query: 462 EHKPYD------HKADVFSFGIVLWEL 482
+ + D+++FG+VLWE+
Sbjct: 190 DEQIRTDCFESYKWTDIWAFGLVLWEI 216
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 85.5 bits (210), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 102/209 (48%), Gaps = 8/209 (3%)
Query: 289 IDPKHLKF---GSKVASGSYGDLYRGTY--CSQDVAIKVLKPERINSDMQKE-FAQEVFI 342
+DP+ +K G + G + Y T + A KV+ + QKE + E+ I
Sbjct: 20 VDPRTMKRYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAI 79
Query: 343 MRKVRHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKG 402
+ + + +VV F G + +V E S+ + LHK + P +G
Sbjct: 80 HKSLDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLE-LHKRRKAVTEPEARYFMRQTIQG 138
Query: 403 MNYLHQNNIIHRDLKAANLLMDENEVVKVADFGVARVKAQSGVMTAE-TGTYRWMAPEVI 461
+ YLH N +IHRDLK NL ++++ VK+ DFG+A G + GT ++APEV+
Sbjct: 139 VQYLHNNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKDLCGTPNYIAPEVL 198
Query: 462 EHKPYDHKADVFSFGIVLWELLTGKLPYE 490
K + + D++S G +L+ LL GK P+E
Sbjct: 199 CKKGHSFEVDIWSLGCILYTLLVGKPPFE 227
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 85.5 bits (210), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 50/164 (30%), Positives = 94/164 (57%), Gaps = 11/164 (6%)
Query: 333 QKEFAQEVFIMRKVRHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFK--LP 390
++E +EV I+R+V H NV+ + ++ E +SGG ++D+L + + + +
Sbjct: 59 REEIEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEAT 118
Query: 391 SLLKVAIDVSKGMNYLHQNNIIHRDLKAANLLMDENEV----VKVADFGVARVKAQSGVM 446
S +K +D G+NYLH I H DLK N+++ + + +K+ DFG+A + + GV
Sbjct: 119 SFIKQILD---GVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAH-EIEDGVE 174
Query: 447 TAET-GTYRWMAPEVIEHKPYDHKADVFSFGIVLWELLTGKLPY 489
GT ++APE++ ++P +AD++S G++ + LL+G P+
Sbjct: 175 FKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 218
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 85.5 bits (210), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 107/198 (54%), Gaps = 10/198 (5%)
Query: 300 VASGSYGD--LYRGTYCSQDVAIKVLKPERINSDMQKEFAQ-EVFIMRKVRHKNVVQFIG 356
+ GSY L R + A++V+K E +N D ++ Q E + + + + +
Sbjct: 60 IGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLH 119
Query: 357 ACTKPPS-LCIVTEFMSGGSVYDYLHKLKGVFKLPS--LLKVAIDVSKGMNYLHQNNIIH 413
+C + S L V E+++GG + ++ + + KLP + ++S +NYLH+ II+
Sbjct: 120 SCFQTESRLFFVIEYVNGGDLMFHMQRQR---KLPEEHARFYSAEISLALNYLHERGIIY 176
Query: 414 RDLKAANLLMDENEVVKVADFGVARVKAQSGVMTAE-TGTYRWMAPEVIEHKPYDHKADV 472
RDLK N+L+D +K+ D+G+ + + G T+ GT ++APE++ + Y D
Sbjct: 177 RDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSTFCGTPNYIAPEILRGEDYGFSVDW 236
Query: 473 FSFGIVLWELLTGKLPYE 490
++ G++++E++ G+ P++
Sbjct: 237 WALGVLMFEMMAGRSPFD 254
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 85.5 bits (210), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 50/164 (30%), Positives = 94/164 (57%), Gaps = 11/164 (6%)
Query: 333 QKEFAQEVFIMRKVRHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFK--LP 390
++E +EV I+R+V H NV+ + ++ E +SGG ++D+L + + + +
Sbjct: 59 REEIEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEAT 118
Query: 391 SLLKVAIDVSKGMNYLHQNNIIHRDLKAANLLMDENEV----VKVADFGVARVKAQSGVM 446
S +K +D G+NYLH I H DLK N+++ + + +K+ DFG+A + + GV
Sbjct: 119 SFIKQILD---GVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAH-EIEDGVE 174
Query: 447 TAET-GTYRWMAPEVIEHKPYDHKADVFSFGIVLWELLTGKLPY 489
GT ++APE++ ++P +AD++S G++ + LL+G P+
Sbjct: 175 FKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 218
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 85.1 bits (209), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 50/164 (30%), Positives = 94/164 (57%), Gaps = 11/164 (6%)
Query: 333 QKEFAQEVFIMRKVRHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFK--LP 390
++E +EV I+R+V H NV+ + ++ E +SGG ++D+L + + + +
Sbjct: 59 REEIEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEAT 118
Query: 391 SLLKVAIDVSKGMNYLHQNNIIHRDLKAANLLMDENEV----VKVADFGVARVKAQSGVM 446
S +K +D G+NYLH I H DLK N+++ + + +K+ DFG+A + + GV
Sbjct: 119 SFIKQILD---GVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAH-EIEDGVE 174
Query: 447 TAET-GTYRWMAPEVIEHKPYDHKADVFSFGIVLWELLTGKLPY 489
GT ++APE++ ++P +AD++S G++ + LL+G P+
Sbjct: 175 FKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 218
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 85.1 bits (209), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 50/164 (30%), Positives = 94/164 (57%), Gaps = 11/164 (6%)
Query: 333 QKEFAQEVFIMRKVRHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFK--LP 390
++E +EV I+R+V H NV+ + ++ E +SGG ++D+L + + + +
Sbjct: 59 REEIEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEAT 118
Query: 391 SLLKVAIDVSKGMNYLHQNNIIHRDLKAANLLMDENEV----VKVADFGVARVKAQSGVM 446
S +K +D G+NYLH I H DLK N+++ + + +K+ DFG+A + + GV
Sbjct: 119 SFIKQILD---GVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAH-EIEDGVE 174
Query: 447 TAET-GTYRWMAPEVIEHKPYDHKADVFSFGIVLWELLTGKLPY 489
GT ++APE++ ++P +AD++S G++ + LL+G P+
Sbjct: 175 FKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 218
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 85.1 bits (209), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 102/209 (48%), Gaps = 8/209 (3%)
Query: 289 IDPKHLKF---GSKVASGSYGDLYRGTY--CSQDVAIKVLKPERINSDMQKE-FAQEVFI 342
+DP+ +K G + G + Y T + A KV+ + QKE + E+ I
Sbjct: 36 VDPRTMKRYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAI 95
Query: 343 MRKVRHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKG 402
+ + + +VV F G + +V E S+ + LHK + P +G
Sbjct: 96 HKSLDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLE-LHKRRKAVTEPEARYFMRQTIQG 154
Query: 403 MNYLHQNNIIHRDLKAANLLMDENEVVKVADFGVARVKAQSGVMTAE-TGTYRWMAPEVI 461
+ YLH N +IHRDLK NL ++++ VK+ DFG+A G + GT ++APEV+
Sbjct: 155 VQYLHNNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKDLCGTPNYIAPEVL 214
Query: 462 EHKPYDHKADVFSFGIVLWELLTGKLPYE 490
K + + D++S G +L+ LL GK P+E
Sbjct: 215 CKKGHSFEVDIWSLGCILYTLLVGKPPFE 243
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 85.1 bits (209), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 106/207 (51%), Gaps = 8/207 (3%)
Query: 300 VASGSYGD--LYRGTYCSQDVAIKVLKPERINSDMQKEFA-QEVFIMRKVRHKNVVQFIG 356
+ +GS+G L + A+K+L +++ Q E E I++ V +V+
Sbjct: 49 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 357 ACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDL 416
+ +L +V E+ GG ++ +L ++ G F P A + YLH ++I+RDL
Sbjct: 109 SFKDNSNLYMVMEYAPGGEMFSHLRRI-GRFSEPHARFYAAQIVLTFEYLHSLDLIYRDL 167
Query: 417 KAANLLMDENEVVKVADFGVA-RVKAQSGVMTAETGTYRWMAPEVIEHKPYDHKADVFSF 475
K NL++D+ ++V DFG A RVK ++ + GT ++APE+I K Y+ D ++
Sbjct: 168 KPENLMIDQQGYIQVTDFGFAKRVKGRTWXL---CGTPEYLAPEIILSKGYNKAVDWWAL 224
Query: 476 GIVLWELLTGKLPYEYLTPLQAAVGVV 502
G++++E+ G P+ P+Q +V
Sbjct: 225 GVLIYEMAAGYPPFFADQPIQIYEKIV 251
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 85.1 bits (209), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 50/164 (30%), Positives = 94/164 (57%), Gaps = 11/164 (6%)
Query: 333 QKEFAQEVFIMRKVRHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFK--LP 390
++E +EV I+R+V H NV+ + ++ E +SGG ++D+L + + + +
Sbjct: 59 REEIEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEAT 118
Query: 391 SLLKVAIDVSKGMNYLHQNNIIHRDLKAANLLMDENEV----VKVADFGVARVKAQSGVM 446
S +K +D G+NYLH I H DLK N+++ + + +K+ DFG+A + + GV
Sbjct: 119 SFIKQILD---GVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAH-EIEDGVE 174
Query: 447 TAET-GTYRWMAPEVIEHKPYDHKADVFSFGIVLWELLTGKLPY 489
GT ++APE++ ++P +AD++S G++ + LL+G P+
Sbjct: 175 FKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 218
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 85.1 bits (209), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 64/210 (30%), Positives = 103/210 (49%), Gaps = 18/210 (8%)
Query: 287 WEIDPKHLKFGSKVASGSYGDLYRGT--YCSQDVAIKVLKPERINSDMQKEFAQEVFIMR 344
WE+ PK + V SG+YG + + VAIK L + K +E+ +++
Sbjct: 20 WEL-PKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLK 78
Query: 345 KVRHKNVVQFIGACTKPPSL------CIVTEFMSGGSVYDYLHKLKGV-FKLPSLLKVAI 397
++H+NV+ + T SL +V FM L K+ G+ F + +
Sbjct: 79 HMQHENVIGLLDVFTPASSLRNFYDFYLVMPFMQTD-----LQKIMGLKFSEEKIQYLVY 133
Query: 398 DVSKGMNYLHQNNIIHRDLKAANLLMDENEVVKVADFGVARVKAQSGVMTAETGTYRWMA 457
+ KG+ Y+H ++HRDLK NL ++E+ +K+ DFG+AR MT T + A
Sbjct: 134 QMLKGLKYIHSAGVVHRDLKPGNLAVNEDCELKILDFGLAR--HADAEMTGYVVTRWYRA 191
Query: 458 PEVI-EHKPYDHKADVFSFGIVLWELLTGK 486
PEVI Y+ D++S G ++ E+LTGK
Sbjct: 192 PEVILSWMHYNQTVDIWSVGCIMAEMLTGK 221
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 85.1 bits (209), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 107/207 (51%), Gaps = 8/207 (3%)
Query: 300 VASGSYGD--LYRGTYCSQDVAIKVLKPERINSDMQKEFA-QEVFIMRKVRHKNVVQFIG 356
+ +GS+G L + A+K+L +++ Q E E I++ V +V+
Sbjct: 49 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 357 ACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDL 416
+ +L +V E+++GG ++ +L ++ G F P A + YLH ++I+RDL
Sbjct: 109 SFKDNSNLYMVMEYVAGGEMFSHLRRI-GRFSEPHARFYAAQIVLTFEYLHSLDLIYRDL 167
Query: 417 KAANLLMDENEVVKVADFGVA-RVKAQSGVMTAETGTYRWMAPEVIEHKPYDHKADVFSF 475
K NLL+D+ ++V DFG A RVK ++ + GT +APE+I K Y+ D ++
Sbjct: 168 KPENLLIDQQGYIQVTDFGFAKRVKGRTWXL---CGTPEALAPEIILSKGYNKAVDWWAL 224
Query: 476 GIVLWELLTGKLPYEYLTPLQAAVGVV 502
G++++E+ G P+ P+Q +V
Sbjct: 225 GVLIYEMAAGYPPFFADQPIQIYEKIV 251
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 85.1 bits (209), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 57/191 (29%), Positives = 96/191 (50%), Gaps = 5/191 (2%)
Query: 300 VASGSYGDLY--RGTYCSQDVAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQFIGA 357
V GSYG + R + VAIK + ++K +E+ +++++RH+N+V +
Sbjct: 33 VGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHENLVNLLEV 92
Query: 358 CTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDLK 417
C K +V EF+ ++ D L + K + G+ + H +NIIHRD+K
Sbjct: 93 CKKKKRWYLVFEFVDH-TILDDLELFPNGLDYQVVQKYLFQIINGIGFCHSHNIIHRDIK 151
Query: 418 AANLLMDENEVVKVADFGVARVKAQSG-VMTAETGTYRWMAPE-VIEHKPYDHKADVFSF 475
N+L+ ++ VVK+ DFG AR A G V E T + APE ++ Y DV++
Sbjct: 152 PENILVSQSGVVKLCDFGFARTLAAPGEVYDDEVATRWYRAPELLVGDVKYGKAVDVWAI 211
Query: 476 GIVLWELLTGK 486
G ++ E+ G+
Sbjct: 212 GCLVTEMFMGE 222
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 85.1 bits (209), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 105/207 (50%), Gaps = 8/207 (3%)
Query: 300 VASGSYGD--LYRGTYCSQDVAIKVLKPERINSDMQKEFA-QEVFIMRKVRHKNVVQFIG 356
+ +GS+G L + A+K+L +++ Q E E I++ V + +
Sbjct: 50 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLTKLEF 109
Query: 357 ACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDL 416
+ +L +V E+ GG ++ +L ++ G F P A + YLH ++I+RDL
Sbjct: 110 SFKDNSNLYMVMEYAPGGEMFSHLRRI-GRFSEPHARFYAAQIVLTFEYLHSLDLIYRDL 168
Query: 417 KAANLLMDENEVVKVADFGVA-RVKAQSGVMTAETGTYRWMAPEVIEHKPYDHKADVFSF 475
K NL++D+ +KV DFG A RVK ++ + GT ++APE+I K Y+ D ++
Sbjct: 169 KPENLMIDQQGYIKVTDFGFAKRVKGRTWXL---CGTPEYLAPEIILSKGYNKAVDWWAL 225
Query: 476 GIVLWELLTGKLPYEYLTPLQAAVGVV 502
G++++E+ G P+ P+Q +V
Sbjct: 226 GVLIYEMAAGYPPFFADQPIQIYEKIV 252
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 105/207 (50%), Gaps = 8/207 (3%)
Query: 300 VASGSYGD--LYRGTYCSQDVAIKVLKPERINSDMQKEFA-QEVFIMRKVRHKNVVQFIG 356
+ +GS+G L + A+K+L +++ Q E E I++ V + +
Sbjct: 50 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLTKLEF 109
Query: 357 ACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDL 416
+ +L +V E+ GG ++ +L ++ G F P A + YLH ++I+RDL
Sbjct: 110 SFKDNSNLYMVMEYAPGGEMFSHLRRI-GRFSEPHARFYAAQIVLTFEYLHSLDLIYRDL 168
Query: 417 KAANLLMDENEVVKVADFGVA-RVKAQSGVMTAETGTYRWMAPEVIEHKPYDHKADVFSF 475
K NL++D+ +KV DFG A RVK ++ + GT ++APE+I K Y+ D ++
Sbjct: 169 KPENLMIDQQGYIKVTDFGFAKRVKGRTWXL---CGTPEYLAPEIILSKGYNKAVDWWAL 225
Query: 476 GIVLWELLTGKLPYEYLTPLQAAVGVV 502
G++++E+ G P+ P+Q +V
Sbjct: 226 GVLIYEMAAGYPPFFADQPIQIYEKIV 252
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 109/206 (52%), Gaps = 17/206 (8%)
Query: 297 GSKVASGSYGDL--YRGTYCSQDVAIKVLKPERINSD----MQKEFAQEVFIMRKVRHKN 350
G ++ SG + + R + A K +K + + ++E +EV I+R+V H N
Sbjct: 17 GEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPN 76
Query: 351 VVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFK--LPSLLKVAIDVSKGMNYLHQ 408
++ + ++ E +SGG ++D+L + + + + S +K +D G+NYLH
Sbjct: 77 IITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILD---GVNYLHT 133
Query: 409 NNIIHRDLKAANLLMDENEV----VKVADFGVARVKAQSGVMTAET-GTYRWMAPEVIEH 463
I H DLK N+++ + + +K+ DFG+A + + GV GT ++APE++ +
Sbjct: 134 KKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAH-EIEDGVEFKNIFGTPEFVAPEIVNY 192
Query: 464 KPYDHKADVFSFGIVLWELLTGKLPY 489
+P +AD++S G++ + LL+G P+
Sbjct: 193 EPLGLEADMWSIGVITYILLSGASPF 218
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 105/207 (50%), Gaps = 8/207 (3%)
Query: 300 VASGSYGD--LYRGTYCSQDVAIKVLKPERINSDMQKEFA-QEVFIMRKVRHKNVVQFIG 356
+ +GS+G L + A+K+L +++ Q E E I++ V + +
Sbjct: 50 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLTKLEF 109
Query: 357 ACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDL 416
+ +L +V E+ GG ++ +L ++ G F P A + YLH ++I+RDL
Sbjct: 110 SFKDNSNLYMVMEYAPGGEMFSHLRRI-GRFXEPHARFYAAQIVLTFEYLHSLDLIYRDL 168
Query: 417 KAANLLMDENEVVKVADFGVA-RVKAQSGVMTAETGTYRWMAPEVIEHKPYDHKADVFSF 475
K NL++D+ +KV DFG A RVK ++ + GT ++APE+I K Y+ D ++
Sbjct: 169 KPENLMIDQQGYIKVTDFGFAKRVKGRTWXL---CGTPEYLAPEIILSKGYNKAVDWWAL 225
Query: 476 GIVLWELLTGKLPYEYLTPLQAAVGVV 502
G++++E+ G P+ P+Q +V
Sbjct: 226 GVLIYEMAAGYPPFFADQPIQIYEKIV 252
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 64/210 (30%), Positives = 103/210 (49%), Gaps = 18/210 (8%)
Query: 287 WEIDPKHLKFGSKVASGSYGDLYRGT--YCSQDVAIKVLKPERINSDMQKEFAQEVFIMR 344
WE+ PK + V SG+YG + + VAIK L + K +E+ +++
Sbjct: 38 WEL-PKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLK 96
Query: 345 KVRHKNVVQFIGACTKPPSL------CIVTEFMSGGSVYDYLHKLKGV-FKLPSLLKVAI 397
++H+NV+ + T SL +V FM L K+ G+ F + +
Sbjct: 97 HMQHENVIGLLDVFTPASSLRNFYDFYLVMPFMQTD-----LQKIMGMEFSEEKIQYLVY 151
Query: 398 DVSKGMNYLHQNNIIHRDLKAANLLMDENEVVKVADFGVARVKAQSGVMTAETGTYRWMA 457
+ KG+ Y+H ++HRDLK NL ++E+ +K+ DFG+AR MT T + A
Sbjct: 152 QMLKGLKYIHSAGVVHRDLKPGNLAVNEDCELKILDFGLAR--HADAEMTGYVVTRWYRA 209
Query: 458 PEVI-EHKPYDHKADVFSFGIVLWELLTGK 486
PEVI Y+ D++S G ++ E+LTGK
Sbjct: 210 PEVILSWMHYNQTVDIWSVGCIMAEMLTGK 239
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 98/201 (48%), Gaps = 4/201 (1%)
Query: 294 LKFGSKVASGSYGDLYRG--TYCSQDVAIKVL-KPERINSDMQKEFAQEVFIMRKVRHKN 350
K G+ + GS+ +YR + +VAIK++ K + M + EV I +++H +
Sbjct: 13 FKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPS 72
Query: 351 VVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNN 410
+++ + +V E G + YL F + GM YLH +
Sbjct: 73 ILELYNYFEDSNYVYLVLEMCHNGEMNRYLKNRVKPFSENEARHFMHQIITGMLYLHSHG 132
Query: 411 IIHRDLKAANLLMDENEVVKVADFGVA-RVKAQSGVMTAETGTYRWMAPEVIEHKPYDHK 469
I+HRDL +NLL+ N +K+ADFG+A ++K GT +++PE+ + +
Sbjct: 133 ILHRDLTLSNLLLTRNMNIKIADFGLATQLKMPHEKHYTLCGTPNYISPEIATRSAHGLE 192
Query: 470 ADVFSFGIVLWELLTGKLPYE 490
+DV+S G + + LL G+ P++
Sbjct: 193 SDVWSLGCMFYTLLIGRPPFD 213
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 107/207 (51%), Gaps = 8/207 (3%)
Query: 300 VASGSYGD--LYRGTYCSQDVAIKVLKPERINSDMQKEFA-QEVFIMRKVRHKNVVQFIG 356
+ +GS+G L + A+K+L +++ Q E E I++ V +V+
Sbjct: 49 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 357 ACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDL 416
+ +L +V E+++GG ++ +L ++ G F P A + YLH ++I+RDL
Sbjct: 109 SFKDNSNLYMVMEYVAGGEMFSHLRRI-GRFSEPHARFYAAQIVLTFEYLHSLDLIYRDL 167
Query: 417 KAANLLMDENEVVKVADFGVA-RVKAQSGVMTAETGTYRWMAPEVIEHKPYDHKADVFSF 475
K NLL+D+ ++V DFG A RVK ++ + GT ++AP +I K Y+ D ++
Sbjct: 168 KPENLLIDQQGYIQVTDFGFAKRVKGRTWXL---CGTPEYLAPAIILSKGYNKAVDWWAL 224
Query: 476 GIVLWELLTGKLPYEYLTPLQAAVGVV 502
G++++E+ G P+ P+Q +V
Sbjct: 225 GVLIYEMAAGYPPFFADQPIQIYEKIV 251
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 54/184 (29%), Positives = 94/184 (51%), Gaps = 21/184 (11%)
Query: 318 VAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQFIGACTKPPSLCIVTEFMSGGSVY 377
VAIK++ + SD+ + E+ ++ +RH+++ Q + +V E+ GG ++
Sbjct: 38 VAIKIMDKNTLGSDLPR-IKTEIEALKNLRHQHICQLYHVLETANKIFMVLEYCPGGELF 96
Query: 378 DYL--------HKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDLKAANLLMDENEVV 429
DY+ + + VF+ + + Y+H HRDLK NLL DE +
Sbjct: 97 DYIISQDRLSEEETRVVFR---------QIVSAVAYVHSQGYAHRDLKPENLLFDEYHKL 147
Query: 430 KVADFGV-ARVKAQSGV-MTAETGTYRWMAPEVIEHKPY-DHKADVFSFGIVLWELLTGK 486
K+ DFG+ A+ K + G+ + APE+I+ K Y +ADV+S GI+L+ L+ G
Sbjct: 148 KLIDFGLCAKPKGNKDYHLQTCCGSLAYAAPELIQGKSYLGSEADVWSMGILLYVLMCGF 207
Query: 487 LPYE 490
LP++
Sbjct: 208 LPFD 211
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 107/207 (51%), Gaps = 8/207 (3%)
Query: 300 VASGSYGD--LYRGTYCSQDVAIKVLKPERINSDMQKEFA-QEVFIMRKVRHKNVVQFIG 356
+ +GS+G L + A+K+L +++ + E E I++ V +V+
Sbjct: 49 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKEIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 357 ACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDL 416
+ +L +V E+ GG ++ +L ++ G F P A + YLH ++I+RDL
Sbjct: 109 SFKDNSNLYMVMEYAPGGEMFSHLRRI-GRFSEPHARFYAAQIVLTFEYLHSLDLIYRDL 167
Query: 417 KAANLLMDENEVVKVADFGVA-RVKAQSGVMTAETGTYRWMAPEVIEHKPYDHKADVFSF 475
K NL++D+ ++V DFG+A RVK ++ + GT ++APE+I K Y+ D ++
Sbjct: 168 KPENLMIDQQGYIQVTDFGLAKRVKGRTWXL---CGTPEYLAPEIILSKGYNKAVDWWAL 224
Query: 476 GIVLWELLTGKLPYEYLTPLQAAVGVV 502
G++++E+ G P+ P+Q +V
Sbjct: 225 GVLIYEMAAGYPPFFADQPIQIYEKIV 251
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 105/215 (48%), Gaps = 25/215 (11%)
Query: 286 VWEIDPKHLKFGSKVASGSYGDLYRG--TYCSQDVAIKVLKPERINSDMQKEFAQEVFIM 343
+WE+ P+ + S V SG+YG + T VA+K L + K +E+ ++
Sbjct: 24 IWEV-PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL 82
Query: 344 RKVRHKNVVQFIGACTKPPSL------CIVTEFMSGGSVYDYLHKLKGVFKLPSLLK--- 394
+ ++H+NV+ + T SL +VT M L + K L
Sbjct: 83 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGA--------DLNNIVKCQKLTDDHV 134
Query: 395 --VAIDVSKGMNYLHQNNIIHRDLKAANLLMDENEVVKVADFGVARVKAQSGVMTAETGT 452
+ + +G+ Y+H +IIHRDLK +NL ++E+ +K+ DFG+AR A MT T
Sbjct: 135 QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTADE--MTGYVAT 192
Query: 453 YRWMAPEV-IEHKPYDHKADVFSFGIVLWELLTGK 486
+ APE+ + Y+ D++S G ++ ELLTG+
Sbjct: 193 RWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 69/233 (29%), Positives = 113/233 (48%), Gaps = 12/233 (5%)
Query: 283 GTDVWEIDPKHLKFGSKVASGSYG--DLYRGTYCSQDVAIKVLKPERINSDMQKEFAQEV 340
G +E+ L+ ++ G+YG + R Q +A+K ++ +NS QK ++
Sbjct: 42 GNQNFEVKADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIR-ATVNSQEQKRLLMDL 100
Query: 341 FI-MRKVRHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPS--LLKVAI 397
I MR V V F GA + + I E M Y + +P L K+A+
Sbjct: 101 DISMRTVDCPFTVTFYGALFREGDVWICMELMDTSLDKFYKQVIDKGQTIPEDILGKIAV 160
Query: 398 DVSKGMNYLHQN-NIIHRDLKAANLLMDENEVVKVADFGVARVKAQSGVMTAETGTYRWM 456
+ K + +LH ++IHRD+K +N+L++ VK+ DFG++ S T + G +M
Sbjct: 161 SIVKALEHLHSKLSVIHRDVKPSNVLINALGQVKMCDFGISGYLVDSVAKTIDAGCKPYM 220
Query: 457 APEVI----EHKPYDHKADVFSFGIVLWELLTGKLPYE-YLTPLQAAVGVVQK 504
APE I K Y K+D++S GI + EL + PY+ + TP Q VV++
Sbjct: 221 APERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQQLKQVVEE 273
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 105/215 (48%), Gaps = 25/215 (11%)
Query: 286 VWEIDPKHLKFGSKVASGSYGDLYRG--TYCSQDVAIKVLKPERINSDMQKEFAQEVFIM 343
+WE+ P+ + S V SG+YG + T VA+K L + K +E+ ++
Sbjct: 24 IWEV-PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL 82
Query: 344 RKVRHKNVVQFIGACTKPPSL------CIVTEFMSGGSVYDYLHKLKGVFKLPSLLK--- 394
+ ++H+NV+ + T SL +VT M L + K L
Sbjct: 83 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGA--------DLNNIVKCQKLTDDHV 134
Query: 395 --VAIDVSKGMNYLHQNNIIHRDLKAANLLMDENEVVKVADFGVARVKAQSGVMTAETGT 452
+ + +G+ Y+H +IIHRDLK +NL ++E+ +K+ DFG+AR A MT T
Sbjct: 135 QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTADE--MTGYVAT 192
Query: 453 YRWMAPEV-IEHKPYDHKADVFSFGIVLWELLTGK 486
+ APE+ + Y+ D++S G ++ ELLTG+
Sbjct: 193 RWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 105/215 (48%), Gaps = 25/215 (11%)
Query: 286 VWEIDPKHLKFGSKVASGSYGDLYRG--TYCSQDVAIKVLKPERINSDMQKEFAQEVFIM 343
+WE+ P+ + S V SG+YG + T VA+K L + K +E+ ++
Sbjct: 24 IWEV-PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL 82
Query: 344 RKVRHKNVVQFIGACTKPPSL------CIVTEFMSGGSVYDYLHKLKGVFKLPSLLK--- 394
+ ++H+NV+ + T SL +VT M L + K L
Sbjct: 83 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGA--------DLNNIVKCQKLTDDHV 134
Query: 395 --VAIDVSKGMNYLHQNNIIHRDLKAANLLMDENEVVKVADFGVARVKAQSGVMTAETGT 452
+ + +G+ Y+H +IIHRDLK +NL ++E+ +K+ DFG+AR A MT T
Sbjct: 135 QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTADE--MTGYVAT 192
Query: 453 YRWMAPEV-IEHKPYDHKADVFSFGIVLWELLTGK 486
+ APE+ + Y+ D++S G ++ ELLTG+
Sbjct: 193 RWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 104/212 (49%), Gaps = 11/212 (5%)
Query: 291 PKHLKFGSKVASGSYGD--LYRGTYCSQDVAIKVLKPERINSDMQKEF-AQEVFIMRKVR 347
P+ KFG + GS+ L R S++ AIK+L+ I + + + +E +M ++
Sbjct: 9 PEDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLD 68
Query: 348 HKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLH 407
H V+ L + G + Y+ K+ G F ++ + YLH
Sbjct: 69 HPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKI-GSFDETCTRFYTAEIVSALEYLH 127
Query: 408 QNNIIHRDLKAANLLMDENEVVKVADFGVARV---KAQSGVMTAETGTYRWMAPEVIEHK 464
IIHRDLK N+L++E+ +++ DFG A+V +++ GT ++++PE++ K
Sbjct: 128 GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEK 187
Query: 465 PYDHKADVFSFGIVLWELLTGKLPY----EYL 492
+D+++ G ++++L+ G P+ EYL
Sbjct: 188 SACKSSDLWALGCIIYQLVAGLPPFRAGNEYL 219
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 104/212 (49%), Gaps = 11/212 (5%)
Query: 291 PKHLKFGSKVASGSYGD--LYRGTYCSQDVAIKVLKPERINSDMQKEF-AQEVFIMRKVR 347
P+ KFG + GS+ L R S++ AIK+L+ I + + + +E +M ++
Sbjct: 8 PEDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLD 67
Query: 348 HKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLH 407
H V+ L + G + Y+ K+ G F ++ + YLH
Sbjct: 68 HPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKI-GSFDETCTRFYTAEIVSALEYLH 126
Query: 408 QNNIIHRDLKAANLLMDENEVVKVADFGVARV---KAQSGVMTAETGTYRWMAPEVIEHK 464
IIHRDLK N+L++E+ +++ DFG A+V +++ GT ++++PE++ K
Sbjct: 127 GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEK 186
Query: 465 PYDHKADVFSFGIVLWELLTGKLPY----EYL 492
+D+++ G ++++L+ G P+ EYL
Sbjct: 187 SACKSSDLWALGCIIYQLVAGLPPFRAGNEYL 218
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 104/212 (49%), Gaps = 11/212 (5%)
Query: 291 PKHLKFGSKVASGSYGD--LYRGTYCSQDVAIKVLKPERINSDMQKEF-AQEVFIMRKVR 347
P+ KFG + GS+ L R S++ AIK+L+ I + + + +E +M ++
Sbjct: 7 PEDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLD 66
Query: 348 HKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLH 407
H V+ L + G + Y+ K+ G F ++ + YLH
Sbjct: 67 HPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKI-GSFDETCTRFYTAEIVSALEYLH 125
Query: 408 QNNIIHRDLKAANLLMDENEVVKVADFGVARV---KAQSGVMTAETGTYRWMAPEVIEHK 464
IIHRDLK N+L++E+ +++ DFG A+V +++ GT ++++PE++ K
Sbjct: 126 GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEK 185
Query: 465 PYDHKADVFSFGIVLWELLTGKLPY----EYL 492
+D+++ G ++++L+ G P+ EYL
Sbjct: 186 SACKSSDLWALGCIIYQLVAGLPPFRAGNEYL 217
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 48/205 (23%), Positives = 103/205 (50%), Gaps = 9/205 (4%)
Query: 293 HLKFGSKVASGSYGDLYRGTYCSQDVAIKVLKPERI----NSDMQKEFAQEVFIMRKVRH 348
+ + K+ G + ++YR C D LK +I ++ + + +E+ +++++ H
Sbjct: 33 NFRIEKKIGRGQFSEVYRAA-CLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNH 91
Query: 349 KNVVQFIGACTKPPSLCIVTEFMSGGSV---YDYLHKLKGVFKLPSLLKVAIDVSKGMNY 405
NV+++ + + L IV E G + + K K + ++ K + + + +
Sbjct: 92 PNVIKYYASFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEH 151
Query: 406 LHQNNIIHRDLKAANLLMDENEVVKVADFGVAR-VKAQSGVMTAETGTYRWMAPEVIEHK 464
+H ++HRD+K AN+ + VVK+ D G+ R +++ + GT +M+PE I
Sbjct: 152 MHSRRVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTAAHSLVGTPYYMSPERIHEN 211
Query: 465 PYDHKADVFSFGIVLWELLTGKLPY 489
Y+ K+D++S G +L+E+ + P+
Sbjct: 212 GYNFKSDIWSLGCLLYEMAALQSPF 236
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 104/212 (49%), Gaps = 11/212 (5%)
Query: 291 PKHLKFGSKVASGSYGD--LYRGTYCSQDVAIKVLKPERINSDMQKEF-AQEVFIMRKVR 347
P+ KFG + GS+ L R S++ AIK+L+ I + + + +E +M ++
Sbjct: 6 PEDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLD 65
Query: 348 HKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLH 407
H V+ L + G + Y+ K+ G F ++ + YLH
Sbjct: 66 HPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKI-GSFDETCTRFYTAEIVSALEYLH 124
Query: 408 QNNIIHRDLKAANLLMDENEVVKVADFGVARV---KAQSGVMTAETGTYRWMAPEVIEHK 464
IIHRDLK N+L++E+ +++ DFG A+V +++ GT ++++PE++ K
Sbjct: 125 GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEK 184
Query: 465 PYDHKADVFSFGIVLWELLTGKLPY----EYL 492
+D+++ G ++++L+ G P+ EYL
Sbjct: 185 SACKSSDLWALGCIIYQLVAGLPPFRAGNEYL 216
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 104/215 (48%), Gaps = 25/215 (11%)
Query: 286 VWEIDPKHLKFGSKVASGSYGDLYRG--TYCSQDVAIKVLKPERINSDMQKEFAQEVFIM 343
+WE+ P+ + S V SG+YG + T VA+K L + K +E+ ++
Sbjct: 23 IWEV-PERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLL 81
Query: 344 RKVRHKNVVQFIGACTKPPSL------CIVTEFMSGGSVYDYLHKLKGVFKLPSLLK--- 394
+ ++H+NV+ + T SL +VT M L + K L
Sbjct: 82 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGA--------DLNNIVKCQKLTDDHV 133
Query: 395 --VAIDVSKGMNYLHQNNIIHRDLKAANLLMDENEVVKVADFGVARVKAQSGVMTAETGT 452
+ + +G+ Y+H +IIHRDLK +NL ++E+ +K+ DFG+AR MT T
Sbjct: 134 QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGYVAT 191
Query: 453 YRWMAPEV-IEHKPYDHKADVFSFGIVLWELLTGK 486
+ APE+ + Y+ D++S G ++ ELLTG+
Sbjct: 192 RWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0G|B Chain B, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0H|A Chain A, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0H|B Chain B, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0I|A Chain A, Cask Cam-Kinase Domain- 3'-Amp Complex, P212121 Form
Length = 351
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 57/199 (28%), Positives = 100/199 (50%), Gaps = 11/199 (5%)
Query: 315 SQDVAIKVLKPERINSD---MQKEFAQEVFIMRKVRHKNVVQFIGACTKPPSLCIVTEFM 371
Q A+K++ + S ++ +E I ++H ++V+ + + L +V EFM
Sbjct: 49 GQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVELLETYSSDGMLYMVFEFM 108
Query: 372 SGGSV-YDYLHKLKGVFKLPSLLK--VAIDVSKGMNYLHQNNIIHRDLKAANLLMDENE- 427
G + ++ + + F + + + + Y H NNIIHRD+K +L+ E
Sbjct: 109 DGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHDNNIIHRDVKPHCVLLASKEN 168
Query: 428 --VVKVADFGVARVKAQSG-VMTAETGTYRWMAPEVIEHKPYDHKADVFSFGIVLWELLT 484
VK+ FGVA +SG V GT +MAPEV++ +PY DV+ G++L+ LL+
Sbjct: 169 SAPVKLGGFGVAIQLGESGLVAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLS 228
Query: 485 GKLPYEYLTPLQAAVGVVQ 503
G LP+ Y T + G+++
Sbjct: 229 GCLPF-YGTKERLFEGIIK 246
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 103/209 (49%), Gaps = 11/209 (5%)
Query: 294 LKFGSKVASGSYGD--LYRGTYCSQDVAIKVLKPERINSDMQKEF-AQEVFIMRKVRHKN 350
KFG + GS+ L R S++ AIK+L+ I + + + +E +M ++ H
Sbjct: 32 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 91
Query: 351 VVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNN 410
V+ L + G + Y+ K+ G F ++ + YLH
Sbjct: 92 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKI-GSFDETCTRFYTAEIVSALEYLHGKG 150
Query: 411 IIHRDLKAANLLMDENEVVKVADFGVARV---KAQSGVMTAETGTYRWMAPEVIEHKPYD 467
IIHRDLK N+L++E+ +++ DFG A+V +++ A GT ++++PE++ K
Sbjct: 151 IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANAFVGTAQYVSPELLTEKSAC 210
Query: 468 HKADVFSFGIVLWELLTGKLPY----EYL 492
+D+++ G ++++L+ G P+ EYL
Sbjct: 211 KSSDLWALGCIIYQLVAGLPPFRAGNEYL 239
>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX
Length = 361
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 57/199 (28%), Positives = 100/199 (50%), Gaps = 11/199 (5%)
Query: 315 SQDVAIKVLKPERINSD---MQKEFAQEVFIMRKVRHKNVVQFIGACTKPPSLCIVTEFM 371
Q A+K++ + S ++ +E I ++H ++V+ + + L +V EFM
Sbjct: 51 GQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVELLETYSSDGMLYMVFEFM 110
Query: 372 SGGSV-YDYLHKLKGVFKLPSLLK--VAIDVSKGMNYLHQNNIIHRDLKAANLLMDENE- 427
G + ++ + + F + + + + Y H NNIIHRD+K +L+ E
Sbjct: 111 DGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHDNNIIHRDVKPHCVLLASKEN 170
Query: 428 --VVKVADFGVARVKAQSG-VMTAETGTYRWMAPEVIEHKPYDHKADVFSFGIVLWELLT 484
VK+ FGVA +SG V GT +MAPEV++ +PY DV+ G++L+ LL+
Sbjct: 171 SAPVKLGGFGVAIQLGESGLVAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLS 230
Query: 485 GKLPYEYLTPLQAAVGVVQ 503
G LP+ Y T + G+++
Sbjct: 231 GCLPF-YGTKERLFEGIIK 248
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 104/215 (48%), Gaps = 25/215 (11%)
Query: 286 VWEIDPKHLKFGSKVASGSYGDLYRG--TYCSQDVAIKVLKPERINSDMQKEFAQEVFIM 343
+WE+ P+ + S V SG+YG + T VA+K L + K +E+ ++
Sbjct: 23 IWEV-PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL 81
Query: 344 RKVRHKNVVQFIGACTKPPSL------CIVTEFMSGGSVYDYLHKLKGVFKLPSLLK--- 394
+ ++H+NV+ + T SL +VT M L + K L
Sbjct: 82 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGA--------DLNNIVKCQKLTDDHV 133
Query: 395 --VAIDVSKGMNYLHQNNIIHRDLKAANLLMDENEVVKVADFGVARVKAQSGVMTAETGT 452
+ + +G+ Y+H +IIHRDLK +NL ++E+ +K+ DFG+AR MT T
Sbjct: 134 QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDSELKILDFGLAR--HTDDEMTGYVAT 191
Query: 453 YRWMAPEV-IEHKPYDHKADVFSFGIVLWELLTGK 486
+ APE+ + Y+ D++S G ++ ELLTG+
Sbjct: 192 RWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 65/240 (27%), Positives = 116/240 (48%), Gaps = 36/240 (15%)
Query: 286 VWEIDPKHLKFGSKVASGSYGDLYRGTYCSQ-------DVAIKVLKPERINSDMQKEFAQ 338
V+++ P++ S + G+YG CS VAIK + P + Q+ +
Sbjct: 38 VFDVGPRYTNL-SYIGEGAYG-----MVCSAYDNVNKVRVAIKKISPFEHQTYCQRTL-R 90
Query: 339 EVFIMRKVRHKNVVQFIGACTKPPSL------CIVTEFMSGGSVYDYLHKLKGVFKLPS- 391
E+ I+ + RH+N++ I + P++ +VT M L+KL L +
Sbjct: 91 EIKILLRFRHENIIG-INDIIRAPTIEQMKDVYLVTHLMGAD-----LYKLLKTQHLSND 144
Query: 392 -LLKVAIDVSKGMNYLHQNNIIHRDLKAANLLMDENEVVKVADFGVARVK----AQSGVM 446
+ + +G+ Y+H N++HRDLK +NLL++ +K+ DFG+ARV +G +
Sbjct: 145 HICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFL 204
Query: 447 TAETGTYRWMAPEV-IEHKPYDHKADVFSFGIVLWELLTGKLPY---EYLTPLQAAVGVV 502
T T + APE+ + K Y D++S G +L E+L+ + + YL L +G++
Sbjct: 205 TEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGIL 264
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 45/110 (40%), Positives = 63/110 (57%), Gaps = 4/110 (3%)
Query: 384 KGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDLKAANLLMDENEVVKVADFGVAR--VKA 441
K L L+ + V+KGM +L IHRDL A N+L+ E VVK+ DFG+AR K
Sbjct: 192 KDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKD 251
Query: 442 QSGVMTAETGT-YRWMAPEVIEHKPYDHKADVFSFGIVLWELLT-GKLPY 489
V + +WMAPE I + Y ++DV+SFG++LWE+ + G PY
Sbjct: 252 PDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPY 301
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 33/118 (27%), Positives = 56/118 (47%), Gaps = 9/118 (7%)
Query: 278 KIPNDGTDVWEIDPKHLKFGSKVASGSYGDLYRG-------TYCSQDVAIKVLKPERINS 330
++P D + WE LK G + G++G + T + VA+K+LK +S
Sbjct: 14 RLPYDASK-WEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHS 72
Query: 331 DMQKEFAQEVFIMRKVRHKNVVQFIGACTKPPS-LCIVTEFMSGGSVYDYLHKLKGVF 387
+ + ++ ++ H NVV +GACTKP L ++ EF G++ YL + F
Sbjct: 73 EHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEF 130
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 103/209 (49%), Gaps = 11/209 (5%)
Query: 294 LKFGSKVASGSYGD--LYRGTYCSQDVAIKVLKPERINSDMQKEF-AQEVFIMRKVRHKN 350
KFG + GS+ L R S++ AIK+L+ I + + + +E +M ++ H
Sbjct: 34 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 93
Query: 351 VVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNN 410
V+ L + G + Y+ K+ G F ++ + YLH
Sbjct: 94 FVKLYFTFQDDEKLYFGLSYAKNGCLLKYIRKI-GSFDETCTRFYTAEIVSALEYLHGKG 152
Query: 411 IIHRDLKAANLLMDENEVVKVADFGVARV---KAQSGVMTAETGTYRWMAPEVIEHKPYD 467
IIHRDLK N+L++E+ +++ DFG A+V +++ + GT ++++PE++ K
Sbjct: 153 IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEKSAS 212
Query: 468 HKADVFSFGIVLWELLTGKLPY----EYL 492
+D+++ G ++++L+ G P+ EYL
Sbjct: 213 KSSDLWALGCIIYQLVAGLPPFRAGNEYL 241
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 45/110 (40%), Positives = 63/110 (57%), Gaps = 4/110 (3%)
Query: 384 KGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDLKAANLLMDENEVVKVADFGVAR--VKA 441
K L L+ + V+KGM +L IHRDL A N+L+ E VVK+ DFG+AR K
Sbjct: 185 KDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKD 244
Query: 442 QSGVMTAETGT-YRWMAPEVIEHKPYDHKADVFSFGIVLWELLT-GKLPY 489
V + +WMAPE I + Y ++DV+SFG++LWE+ + G PY
Sbjct: 245 PDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPY 294
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 33/118 (27%), Positives = 56/118 (47%), Gaps = 9/118 (7%)
Query: 278 KIPNDGTDVWEIDPKHLKFGSKVASGSYGDLYRG-------TYCSQDVAIKVLKPERINS 330
++P D + WE LK G + G++G + T + VA+K+LK +S
Sbjct: 7 RLPYDASK-WEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHS 65
Query: 331 DMQKEFAQEVFIMRKVRHKNVVQFIGACTKPPS-LCIVTEFMSGGSVYDYLHKLKGVF 387
+ + ++ ++ H NVV +GACTKP L ++ EF G++ YL + F
Sbjct: 66 EHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEF 123
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 104/215 (48%), Gaps = 25/215 (11%)
Query: 286 VWEIDPKHLKFGSKVASGSYGDLYRG--TYCSQDVAIKVLKPERINSDMQKEFAQEVFIM 343
+WE+ P+ + S V SG+YG + T VA+K L + K +E+ ++
Sbjct: 19 IWEV-PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL 77
Query: 344 RKVRHKNVVQFIGACTKPPSL------CIVTEFMSGGSVYDYLHKLKGVFKLPSLLK--- 394
+ ++H+NV+ + T SL +VT M L + K L
Sbjct: 78 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGA--------DLNNIVKCQKLTDDHV 129
Query: 395 --VAIDVSKGMNYLHQNNIIHRDLKAANLLMDENEVVKVADFGVARVKAQSGVMTAETGT 452
+ + +G+ Y+H +IIHRDLK +NL ++E+ +K+ DFG+AR MT T
Sbjct: 130 QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDSELKILDFGLAR--HTDDEMTGYVAT 187
Query: 453 YRWMAPEV-IEHKPYDHKADVFSFGIVLWELLTGK 486
+ APE+ + Y+ D++S G ++ ELLTG+
Sbjct: 188 RWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 45/110 (40%), Positives = 63/110 (57%), Gaps = 4/110 (3%)
Query: 384 KGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDLKAANLLMDENEVVKVADFGVAR--VKA 441
K L L+ + V+KGM +L IHRDL A N+L+ E VVK+ DFG+AR K
Sbjct: 187 KDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKD 246
Query: 442 QSGVMTAETGT-YRWMAPEVIEHKPYDHKADVFSFGIVLWELLT-GKLPY 489
V + +WMAPE I + Y ++DV+SFG++LWE+ + G PY
Sbjct: 247 PDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPY 296
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 33/118 (27%), Positives = 56/118 (47%), Gaps = 9/118 (7%)
Query: 278 KIPNDGTDVWEIDPKHLKFGSKVASGSYGDLYRG-------TYCSQDVAIKVLKPERINS 330
++P D + WE LK G + G++G + T + VA+K+LK +S
Sbjct: 9 RLPYDASK-WEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHS 67
Query: 331 DMQKEFAQEVFIMRKVRHKNVVQFIGACTKPPS-LCIVTEFMSGGSVYDYLHKLKGVF 387
+ + ++ ++ H NVV +GACTKP L ++ EF G++ YL + F
Sbjct: 68 EHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEF 125
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 104/215 (48%), Gaps = 25/215 (11%)
Query: 286 VWEIDPKHLKFGSKVASGSYGDLYRG--TYCSQDVAIKVLKPERINSDMQKEFAQEVFIM 343
+WE+ P+ + S V SG+YG + T VA+K L + K +E+ ++
Sbjct: 22 IWEV-PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL 80
Query: 344 RKVRHKNVVQFIGACTKPPSL------CIVTEFMSGGSVYDYLHKLKGVFKLPSLLK--- 394
+ ++H+NV+ + T SL +VT M L + K L
Sbjct: 81 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGA--------DLNNIVKCQKLTDDHV 132
Query: 395 --VAIDVSKGMNYLHQNNIIHRDLKAANLLMDENEVVKVADFGVARVKAQSGVMTAETGT 452
+ + +G+ Y+H +IIHRDLK +NL ++E+ +K+ DFG+AR MT T
Sbjct: 133 QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDXELKILDFGLAR--HTDDEMTGYVAT 190
Query: 453 YRWMAPEV-IEHKPYDHKADVFSFGIVLWELLTGK 486
+ APE+ + Y+ D++S G ++ ELLTG+
Sbjct: 191 RWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 45/110 (40%), Positives = 63/110 (57%), Gaps = 4/110 (3%)
Query: 384 KGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDLKAANLLMDENEVVKVADFGVAR--VKA 441
K L L+ + V+KGM +L IHRDL A N+L+ E VVK+ DFG+AR K
Sbjct: 194 KDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKD 253
Query: 442 QSGVMTAETGT-YRWMAPEVIEHKPYDHKADVFSFGIVLWELLT-GKLPY 489
V + +WMAPE I + Y ++DV+SFG++LWE+ + G PY
Sbjct: 254 PDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPY 303
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 33/118 (27%), Positives = 56/118 (47%), Gaps = 9/118 (7%)
Query: 278 KIPNDGTDVWEIDPKHLKFGSKVASGSYGDLYRG-------TYCSQDVAIKVLKPERINS 330
++P D + WE LK G + G++G + T + VA+K+LK +S
Sbjct: 16 RLPYDASK-WEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHS 74
Query: 331 DMQKEFAQEVFIMRKVRHKNVVQFIGACTKPPS-LCIVTEFMSGGSVYDYLHKLKGVF 387
+ + ++ ++ H NVV +GACTKP L ++ EF G++ YL + F
Sbjct: 75 EHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEF 132
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 106/198 (53%), Gaps = 13/198 (6%)
Query: 299 KVASGSYGDLYRGTYCSQDVAIKVLKPERINSD--MQKEFAQEVFIMRKVRHKNVVQFIG 356
K+ +G+Y +Y+G + V + LK +++S+ +E+ +M++++H+N+V+
Sbjct: 12 KLGNGTYATVYKGLNKTTGVYV-ALKEVKLDSEEGTPSTAIREISLMKELKHENIVRLYD 70
Query: 357 ACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAI------DVSKGMNYLHQNN 410
L +V EFM + Y+ + V P L++ + + +G+ + H+N
Sbjct: 71 VIHTENKLTLVFEFMDN-DLKKYMDS-RTVGNTPRGLELNLVKYFQWQLLQGLAFCHENK 128
Query: 411 IIHRDLKAANLLMDENEVVKVADFGVARVKA-QSGVMTAETGTYRWMAPEVI-EHKPYDH 468
I+HRDLK NLL+++ +K+ DFG+AR ++E T + AP+V+ + Y
Sbjct: 129 ILHRDLKPQNLLINKRGQLKLGDFGLARAFGIPVNTFSSEVVTLWYRAPDVLMGSRTYST 188
Query: 469 KADVFSFGIVLWELLTGK 486
D++S G +L E++TGK
Sbjct: 189 SIDIWSCGCILAEMITGK 206
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 104/215 (48%), Gaps = 25/215 (11%)
Query: 286 VWEIDPKHLKFGSKVASGSYGDLYRG--TYCSQDVAIKVLKPERINSDMQKEFAQEVFIM 343
+WE+ P+ + S V SG+YG + T VA+K L + K +E+ ++
Sbjct: 17 IWEV-PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL 75
Query: 344 RKVRHKNVVQFIGACTKPPSL------CIVTEFMSGGSVYDYLHKLKGVFKLPSLLK--- 394
+ ++H+NV+ + T SL +VT M L + K L
Sbjct: 76 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGA--------DLNNIVKXQKLTDDHV 127
Query: 395 --VAIDVSKGMNYLHQNNIIHRDLKAANLLMDENEVVKVADFGVARVKAQSGVMTAETGT 452
+ + +G+ Y+H +IIHRDLK +NL ++E+ +K+ DFG+AR MT T
Sbjct: 128 QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDXELKILDFGLAR--HTDDEMTGYVAT 185
Query: 453 YRWMAPEV-IEHKPYDHKADVFSFGIVLWELLTGK 486
+ APE+ + Y+ D++S G ++ ELLTG+
Sbjct: 186 RWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 104/215 (48%), Gaps = 25/215 (11%)
Query: 286 VWEIDPKHLKFGSKVASGSYGDLYRG--TYCSQDVAIKVLKPERINSDMQKEFAQEVFIM 343
+WE+ P+ + S V SG+YG + T VA+K L + K +E+ ++
Sbjct: 37 IWEV-PERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLL 95
Query: 344 RKVRHKNVVQFIGACTKPPSL------CIVTEFMSGGSVYDYLHKLKGVFKLPSLLK--- 394
+ ++H+NV+ + T SL +VT M L + K L
Sbjct: 96 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGA--------DLNNIVKCQKLTDDHV 147
Query: 395 --VAIDVSKGMNYLHQNNIIHRDLKAANLLMDENEVVKVADFGVARVKAQSGVMTAETGT 452
+ + +G+ Y+H +IIHRDLK +NL ++E+ +K+ DFG+AR MT T
Sbjct: 148 QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGYVAT 205
Query: 453 YRWMAPEV-IEHKPYDHKADVFSFGIVLWELLTGK 486
+ APE+ + Y+ D++S G ++ ELLTG+
Sbjct: 206 RWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 240
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 104/215 (48%), Gaps = 25/215 (11%)
Query: 286 VWEIDPKHLKFGSKVASGSYGDLYRG--TYCSQDVAIKVLKPERINSDMQKEFAQEVFIM 343
+WE+ P+ + S V SG+YG + T VA+K L + K +E+ ++
Sbjct: 17 IWEV-PERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLL 75
Query: 344 RKVRHKNVVQFIGACTKPPSL------CIVTEFMSGGSVYDYLHKLKGVFKLPSLLK--- 394
+ ++H+NV+ + T SL +VT M L + K L
Sbjct: 76 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGA--------DLNNIVKCQKLTDDHV 127
Query: 395 --VAIDVSKGMNYLHQNNIIHRDLKAANLLMDENEVVKVADFGVARVKAQSGVMTAETGT 452
+ + +G+ Y+H +IIHRDLK +NL ++E+ +K+ DFG+AR MT T
Sbjct: 128 QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGYVAT 185
Query: 453 YRWMAPEV-IEHKPYDHKADVFSFGIVLWELLTGK 486
+ APE+ + Y+ D++S G ++ ELLTG+
Sbjct: 186 RWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 104/215 (48%), Gaps = 25/215 (11%)
Query: 286 VWEIDPKHLKFGSKVASGSYGDLYRG--TYCSQDVAIKVLKPERINSDMQKEFAQEVFIM 343
+WE+ P+ + S V SG+YG + T VA+K L + K +E+ ++
Sbjct: 36 IWEV-PERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLL 94
Query: 344 RKVRHKNVVQFIGACTKPPSL------CIVTEFMSGGSVYDYLHKLKGVFKLPSLLK--- 394
+ ++H+NV+ + T SL +VT M L + K L
Sbjct: 95 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGA--------DLNNIVKCQKLTDDHV 146
Query: 395 --VAIDVSKGMNYLHQNNIIHRDLKAANLLMDENEVVKVADFGVARVKAQSGVMTAETGT 452
+ + +G+ Y+H +IIHRDLK +NL ++E+ +K+ DFG+AR MT T
Sbjct: 147 QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGYVAT 204
Query: 453 YRWMAPEV-IEHKPYDHKADVFSFGIVLWELLTGK 486
+ APE+ + Y+ D++S G ++ ELLTG+
Sbjct: 205 RWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 239
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 104/215 (48%), Gaps = 25/215 (11%)
Query: 286 VWEIDPKHLKFGSKVASGSYGDLYRG--TYCSQDVAIKVLKPERINSDMQKEFAQEVFIM 343
+WE+ P+ + S V SG+YG + T VA+K L + K +E+ ++
Sbjct: 13 IWEV-PERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLL 71
Query: 344 RKVRHKNVVQFIGACTKPPSL------CIVTEFMSGGSVYDYLHKLKGVFKLPSLLK--- 394
+ ++H+NV+ + T SL +VT M L + K L
Sbjct: 72 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGA--------DLNNIVKCAKLTDDHV 123
Query: 395 --VAIDVSKGMNYLHQNNIIHRDLKAANLLMDENEVVKVADFGVARVKAQSGVMTAETGT 452
+ + +G+ Y+H +IIHRDLK +NL ++E+ +K+ DFG+AR MT T
Sbjct: 124 QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGYVAT 181
Query: 453 YRWMAPEV-IEHKPYDHKADVFSFGIVLWELLTGK 486
+ APE+ + Y+ D++S G ++ ELLTG+
Sbjct: 182 RWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 103/215 (47%), Gaps = 25/215 (11%)
Query: 286 VWEIDPKHLKFGSKVASGSYGDLYRGTYCSQDVAIKVLKPERINSDM--QKEFAQEVFIM 343
+WE+ P+ + S V SG+YG + + I V K R + K +E+ ++
Sbjct: 46 IWEV-PERYQTLSPVGSGAYGSVCSSYDVKSGLKIAVKKLSRPFQSIIHAKRTYRELRLL 104
Query: 344 RKVRHKNVVQFIGACTKPPSL------CIVTEFMSGGSVYDYLHKLKGVFKLPSLLK--- 394
+ ++H+NV+ + T SL +VT M L + K L
Sbjct: 105 KHMKHENVIGLLDVFTPATSLEEFNDVYLVTHLMGA--------DLNNIVKCQKLTDDHV 156
Query: 395 --VAIDVSKGMNYLHQNNIIHRDLKAANLLMDENEVVKVADFGVARVKAQSGVMTAETGT 452
+ + +G+ Y+H +IIHRDLK +NL ++E+ +K+ DFG+AR MT T
Sbjct: 157 QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGYVAT 214
Query: 453 YRWMAPEV-IEHKPYDHKADVFSFGIVLWELLTGK 486
+ APE+ + Y+ D++S G ++ ELLTG+
Sbjct: 215 RWYRAPEIMLNWMHYNMTVDIWSVGCIMAELLTGR 249
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 104/215 (48%), Gaps = 25/215 (11%)
Query: 286 VWEIDPKHLKFGSKVASGSYGDLYRG--TYCSQDVAIKVLKPERINSDMQKEFAQEVFIM 343
+WE+ P+ + S + SG+YG + T VA+K L + K +E+ ++
Sbjct: 22 IWEV-PERYQNLSPIGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL 80
Query: 344 RKVRHKNVVQFIGACTKPPSL------CIVTEFMSGGSVYDYLHKLKGVFKLPSLLK--- 394
+ ++H+NV+ + T SL +VT M L + K L
Sbjct: 81 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGA--------DLNNIVKCQKLTDDHV 132
Query: 395 --VAIDVSKGMNYLHQNNIIHRDLKAANLLMDENEVVKVADFGVARVKAQSGVMTAETGT 452
+ + +G+ Y+H +IIHRDLK +NL ++E+ +K+ DFG+AR MT T
Sbjct: 133 QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDXELKILDFGLAR--HTDDEMTGYVAT 190
Query: 453 YRWMAPEV-IEHKPYDHKADVFSFGIVLWELLTGK 486
+ APE+ + Y+ D++S G ++ ELLTG+
Sbjct: 191 RWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 104/215 (48%), Gaps = 25/215 (11%)
Query: 286 VWEIDPKHLKFGSKVASGSYGDLYRG--TYCSQDVAIKVLKPERINSDMQKEFAQEVFIM 343
+WE+ P+ + S V SG+YG + T VA+K L + K +E+ ++
Sbjct: 28 IWEV-PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL 86
Query: 344 RKVRHKNVVQFIGACTKPPSL------CIVTEFMSGGSVYDYLHKLKGVFKLPSLLK--- 394
+ ++H+NV+ + T SL +VT M L + K L
Sbjct: 87 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGA--------DLNNIVKCQKLTDDHV 138
Query: 395 --VAIDVSKGMNYLHQNNIIHRDLKAANLLMDENEVVKVADFGVARVKAQSGVMTAETGT 452
+ + +G+ Y+H +IIHRDLK +NL ++E+ +K+ DFG+AR MT T
Sbjct: 139 QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDXELKILDFGLAR--HTDDEMTGYVAT 196
Query: 453 YRWMAPEV-IEHKPYDHKADVFSFGIVLWELLTGK 486
+ APE+ + Y+ D++S G ++ ELLTG+
Sbjct: 197 RWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 231
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 104/215 (48%), Gaps = 25/215 (11%)
Query: 286 VWEIDPKHLKFGSKVASGSYGDLYRG--TYCSQDVAIKVLKPERINSDMQKEFAQEVFIM 343
+WE+ P+ + S V SG+YG + T VA+K L + K +E+ ++
Sbjct: 13 IWEV-PERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLL 71
Query: 344 RKVRHKNVVQFIGACTKPPSL------CIVTEFMSGGSVYDYLHKLKGVFKLPSLLK--- 394
+ ++H+NV+ + T SL +VT M L + K L
Sbjct: 72 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGA--------DLNNIVKCQKLTDDHV 123
Query: 395 --VAIDVSKGMNYLHQNNIIHRDLKAANLLMDENEVVKVADFGVARVKAQSGVMTAETGT 452
+ + +G+ Y+H +IIHRDLK +NL ++E+ +K+ DFG+AR MT T
Sbjct: 124 QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGYVAT 181
Query: 453 YRWMAPEV-IEHKPYDHKADVFSFGIVLWELLTGK 486
+ APE+ + Y+ D++S G ++ ELLTG+
Sbjct: 182 RWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 46/179 (25%), Positives = 100/179 (55%), Gaps = 5/179 (2%)
Query: 315 SQDVAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQFIGACTKPPSLCIVTEFMSGG 374
+Q+ A K++ +++++ ++ +E I R ++H N+V+ + ++ +V + ++GG
Sbjct: 56 TQEYAAKIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDSISEEGFHYLVFDLVTGG 115
Query: 375 SVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDLKAANLLMD---ENEVVKV 431
+++ + + + + + +N++HQ++I+HRDLK NLL+ + VK+
Sbjct: 116 ELFEDI-VAREYYSEADASHCIHQILESVNHIHQHDIVHRDLKPENLLLASKCKGAAVKL 174
Query: 432 ADFGVA-RVKAQSGVMTAETGTYRWMAPEVIEHKPYDHKADVFSFGIVLWELLTGKLPY 489
ADFG+A V+ + GT +++PEV+ PY D+++ G++L+ LL G P+
Sbjct: 175 ADFGLAIEVQGEQQAWFGFAGTPGYLSPEVLRKDPYGKPVDIWACGVILYILLVGYPPF 233
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 104/215 (48%), Gaps = 25/215 (11%)
Query: 286 VWEIDPKHLKFGSKVASGSYGDLYRG--TYCSQDVAIKVLKPERINSDMQKEFAQEVFIM 343
+WE+ P+ + S V SG+YG + T VA+K L + K +E+ ++
Sbjct: 23 IWEV-PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL 81
Query: 344 RKVRHKNVVQFIGACTKPPSL------CIVTEFMSGGSVYDYLHKLKGVFKLPSLLK--- 394
+ ++H+NV+ + T SL +VT M L + K L
Sbjct: 82 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGA--------DLNNIVKCQKLTDDHV 133
Query: 395 --VAIDVSKGMNYLHQNNIIHRDLKAANLLMDENEVVKVADFGVARVKAQSGVMTAETGT 452
+ + +G+ Y+H +IIHRDLK +NL ++E+ +K+ DFG+AR MT T
Sbjct: 134 QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGYVAT 191
Query: 453 YRWMAPEV-IEHKPYDHKADVFSFGIVLWELLTGK 486
+ APE+ + Y+ D++S G ++ ELLTG+
Sbjct: 192 RWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 82.0 bits (201), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 94/204 (46%), Gaps = 32/204 (15%)
Query: 300 VASGSYGDLYRG--TYCSQDVAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQFIGA 357
+ SG+ G + ++VAIK L N K +E+ +M+ V HKN++ +
Sbjct: 32 IGSGAQGIVVAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKVVNHKNIIGLLNV 91
Query: 358 CTKPPSL------CIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSK---------- 401
T SL IV E M L ++++ +D +
Sbjct: 92 FTPQKSLEEFQDVYIVMELMDAN--------------LSQVIQMELDHERMSYLLYQMLV 137
Query: 402 GMNYLHQNNIIHRDLKAANLLMDENEVVKVADFGVARVKAQSGVMTAETGTYRWMAPEVI 461
G+ +LH IIHRDLK +N+++ + +K+ DFG+AR S +MT T + APEVI
Sbjct: 138 GIKHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVI 197
Query: 462 EHKPYDHKADVFSFGIVLWELLTG 485
Y D++S G+++ E++ G
Sbjct: 198 LGMGYKENVDIWSVGVIMGEMIKG 221
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 82.0 bits (201), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 105/215 (48%), Gaps = 25/215 (11%)
Query: 286 VWEIDPKHLKFGSKVASGSYGDLYRG--TYCSQDVAIKVLKPERINSDMQKEFAQEVFIM 343
+WE+ P+ + S V SG+YG + T VA+K L + K +E+ ++
Sbjct: 17 IWEV-PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL 75
Query: 344 RKVRHKNVVQFIGACTKPPSL------CIVTEFMSGGSVYDYLHKLKGVFKLPSLLK--- 394
+ ++H+NV+ + T SL +VT M L + K L
Sbjct: 76 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGA--------DLNNIVKCQKLTDDHV 127
Query: 395 --VAIDVSKGMNYLHQNNIIHRDLKAANLLMDENEVVKVADFGVARVKAQSGVMTAETGT 452
+ + +G+ Y+H +IIHRDLK +NL ++E+ +K+ DFG+AR MT T
Sbjct: 128 QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGYVAT 185
Query: 453 YRWMAPEVIEHKP-YDHKADVFSFGIVLWELLTGK 486
+ APE++ + Y+ D++S G ++ ELLTG+
Sbjct: 186 RWYRAPEIMLNAMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 82.0 bits (201), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 104/215 (48%), Gaps = 25/215 (11%)
Query: 286 VWEIDPKHLKFGSKVASGSYGDLYRG--TYCSQDVAIKVLKPERINSDMQKEFAQEVFIM 343
+WE+ P+ + S V SG+YG + T VA+K L + K +E+ ++
Sbjct: 17 IWEV-PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL 75
Query: 344 RKVRHKNVVQFIGACTKPPSL------CIVTEFMSGGSVYDYLHKLKGVFKLPSLLK--- 394
+ ++H+NV+ + T SL +VT M L + K L
Sbjct: 76 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGA--------DLNNIVKCQKLTDDHV 127
Query: 395 --VAIDVSKGMNYLHQNNIIHRDLKAANLLMDENEVVKVADFGVARVKAQSGVMTAETGT 452
+ + +G+ Y+H +IIHRDLK +NL ++E+ +K+ DFG+AR MT T
Sbjct: 128 QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGXVAT 185
Query: 453 YRWMAPEV-IEHKPYDHKADVFSFGIVLWELLTGK 486
+ APE+ + Y+ D++S G ++ ELLTG+
Sbjct: 186 RWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 82.0 bits (201), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 65/240 (27%), Positives = 116/240 (48%), Gaps = 36/240 (15%)
Query: 286 VWEIDPKHLKFGSKVASGSYGDLYRGTYCSQ-------DVAIKVLKPERINSDMQKEFAQ 338
V+++ P++ S + G+YG CS VAIK + P + Q+ +
Sbjct: 18 VFDVGPRYTNL-SYIGEGAYG-----MVCSAYDNVNKVRVAIKKISPFEHQTYCQRTL-R 70
Query: 339 EVFIMRKVRHKNVVQFIGACTKPPSL------CIVTEFMSGGSVYDYLHKLKGVFKLPS- 391
E+ I+ + RH+N++ I + P++ IV + M L+KL L +
Sbjct: 71 EIKILLRFRHENIIG-INDIIRAPTIEQMKDVYIVQDLMETD-----LYKLLKTQHLSND 124
Query: 392 -LLKVAIDVSKGMNYLHQNNIIHRDLKAANLLMDENEVVKVADFGVARVK----AQSGVM 446
+ + +G+ Y+H N++HRDLK +NLL++ +K+ DFG+ARV +G +
Sbjct: 125 HICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFL 184
Query: 447 TAETGTYRWMAPEV-IEHKPYDHKADVFSFGIVLWELLTGKLPY---EYLTPLQAAVGVV 502
T T + APE+ + K Y D++S G +L E+L+ + + YL L +G++
Sbjct: 185 TEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGIL 244
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 82.0 bits (201), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 104/215 (48%), Gaps = 25/215 (11%)
Query: 286 VWEIDPKHLKFGSKVASGSYGDLYRG--TYCSQDVAIKVLKPERINSDMQKEFAQEVFIM 343
+WE+ P+ + S V SG+YG + T VA+K L + K +E+ ++
Sbjct: 22 IWEV-PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL 80
Query: 344 RKVRHKNVVQFIGACTKPPSL------CIVTEFMSGGSVYDYLHKLKGVFKLPSLLK--- 394
+ ++H+NV+ + T SL +VT M L + K L
Sbjct: 81 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGA--------DLNNIVKCQKLTDDHV 132
Query: 395 --VAIDVSKGMNYLHQNNIIHRDLKAANLLMDENEVVKVADFGVARVKAQSGVMTAETGT 452
+ + +G+ Y+H +IIHRDLK +NL ++E+ +K+ DFG+AR MT T
Sbjct: 133 QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGYVAT 190
Query: 453 YRWMAPEV-IEHKPYDHKADVFSFGIVLWELLTGK 486
+ APE+ + Y+ D++S G ++ ELLTG+
Sbjct: 191 RWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 82.0 bits (201), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 104/215 (48%), Gaps = 25/215 (11%)
Query: 286 VWEIDPKHLKFGSKVASGSYGDLYRG--TYCSQDVAIKVLKPERINSDMQKEFAQEVFIM 343
+WE+ P+ + S V SG+YG + T VA+K L + K +E+ ++
Sbjct: 16 IWEV-PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL 74
Query: 344 RKVRHKNVVQFIGACTKPPSL------CIVTEFMSGGSVYDYLHKLKGVFKLPSLLK--- 394
+ ++H+NV+ + T SL +VT M L + K L
Sbjct: 75 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGA--------DLNNIVKCQKLTDDHV 126
Query: 395 --VAIDVSKGMNYLHQNNIIHRDLKAANLLMDENEVVKVADFGVARVKAQSGVMTAETGT 452
+ + +G+ Y+H +IIHRDLK +NL ++E+ +K+ DFG+AR MT T
Sbjct: 127 QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGYVAT 184
Query: 453 YRWMAPEV-IEHKPYDHKADVFSFGIVLWELLTGK 486
+ APE+ + Y+ D++S G ++ ELLTG+
Sbjct: 185 RWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 219
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 82.0 bits (201), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 104/215 (48%), Gaps = 25/215 (11%)
Query: 286 VWEIDPKHLKFGSKVASGSYGDLYRG--TYCSQDVAIKVLKPERINSDMQKEFAQEVFIM 343
+WE+ P+ + S V SG+YG + T VA+K L + K +E+ ++
Sbjct: 19 IWEV-PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL 77
Query: 344 RKVRHKNVVQFIGACTKPPSL------CIVTEFMSGGSVYDYLHKLKGVFKLPSLLK--- 394
+ ++H+NV+ + T SL +VT M L + K L
Sbjct: 78 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGA--------DLNNIVKCQKLTDDHV 129
Query: 395 --VAIDVSKGMNYLHQNNIIHRDLKAANLLMDENEVVKVADFGVARVKAQSGVMTAETGT 452
+ + +G+ Y+H +IIHRDLK +NL ++E+ +K+ DFG+AR MT T
Sbjct: 130 QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGYVAT 187
Query: 453 YRWMAPEV-IEHKPYDHKADVFSFGIVLWELLTGK 486
+ APE+ + Y+ D++S G ++ ELLTG+
Sbjct: 188 RWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 82.0 bits (201), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 56/194 (28%), Positives = 92/194 (47%), Gaps = 12/194 (6%)
Query: 300 VASGSYGDLYRG--TYCSQDVAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQFIGA 357
+ SG+ G + ++VAIK L N K +E+ +M+ V HKN++ +
Sbjct: 32 IGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNV 91
Query: 358 CTKPPSL------CIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNI 411
T SL IV E M + ++ + + + G+ +LH I
Sbjct: 92 FTPQKSLEEFQDVYIVMELMDA----NLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGI 147
Query: 412 IHRDLKAANLLMDENEVVKVADFGVARVKAQSGVMTAETGTYRWMAPEVIEHKPYDHKAD 471
IHRDLK +N+++ + +K+ DFG+AR S +MT E T + APEVI Y D
Sbjct: 148 IHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPEVVTRYYRAPEVILGMGYKENVD 207
Query: 472 VFSFGIVLWELLTG 485
++S G ++ E++ G
Sbjct: 208 IWSVGCIMGEMIKG 221
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 82.0 bits (201), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 65/240 (27%), Positives = 116/240 (48%), Gaps = 36/240 (15%)
Query: 286 VWEIDPKHLKFGSKVASGSYGDLYRGTYCSQ-------DVAIKVLKPERINSDMQKEFAQ 338
V+++ P++ S + G+YG CS VAIK + P + Q+ +
Sbjct: 18 VFDVGPRYTNL-SYIGEGAYG-----MVCSAYDNVNKVRVAIKKISPFEHQTYCQRTL-R 70
Query: 339 EVFIMRKVRHKNVVQFIGACTKPPSL------CIVTEFMSGGSVYDYLHKLKGVFKLPS- 391
E+ I+ + RH+N++ I + P++ IV + M L+KL L +
Sbjct: 71 EIKILLRFRHENIIG-INDIIRAPTIEQMKDVYIVQDLMETD-----LYKLLKTQHLSND 124
Query: 392 -LLKVAIDVSKGMNYLHQNNIIHRDLKAANLLMDENEVVKVADFGVARVK----AQSGVM 446
+ + +G+ Y+H N++HRDLK +NLL++ +K+ DFG+ARV +G +
Sbjct: 125 HICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFL 184
Query: 447 TAETGTYRWMAPEV-IEHKPYDHKADVFSFGIVLWELLTGKLPY---EYLTPLQAAVGVV 502
T T + APE+ + K Y D++S G +L E+L+ + + YL L +G++
Sbjct: 185 TEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGIL 244
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 82.0 bits (201), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 104/215 (48%), Gaps = 25/215 (11%)
Query: 286 VWEIDPKHLKFGSKVASGSYGDLYRG--TYCSQDVAIKVLKPERINSDMQKEFAQEVFIM 343
+WE+ P+ + S V SG+YG + T VA+K L + K +E+ ++
Sbjct: 29 IWEV-PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSKPFQSIIHAKRTYRELRLL 87
Query: 344 RKVRHKNVVQFIGACTKPPSL------CIVTEFMSGGSVYDYLHKLKGVFKLPSLLK--- 394
+ ++H+NV+ + T SL +VT M L + K L
Sbjct: 88 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGA--------DLNNIVKCQKLTDDHV 139
Query: 395 --VAIDVSKGMNYLHQNNIIHRDLKAANLLMDENEVVKVADFGVARVKAQSGVMTAETGT 452
+ + +G+ Y+H +IIHRDLK +NL ++E+ +K+ DFG+AR MT T
Sbjct: 140 QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGYVAT 197
Query: 453 YRWMAPEV-IEHKPYDHKADVFSFGIVLWELLTGK 486
+ APE+ + Y+ D++S G ++ ELLTG+
Sbjct: 198 RWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 232
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 82.0 bits (201), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 104/215 (48%), Gaps = 25/215 (11%)
Query: 286 VWEIDPKHLKFGSKVASGSYGDLYRG--TYCSQDVAIKVLKPERINSDMQKEFAQEVFIM 343
+WE+ P+ + S V SG+YG + T VA+K L + K +E+ ++
Sbjct: 17 IWEV-PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL 75
Query: 344 RKVRHKNVVQFIGACTKPPSL------CIVTEFMSGGSVYDYLHKLKGVFKLPSLLK--- 394
+ ++H+NV+ + T SL +VT M L + K L
Sbjct: 76 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGA--------DLNNIVKCQKLTDDHV 127
Query: 395 --VAIDVSKGMNYLHQNNIIHRDLKAANLLMDENEVVKVADFGVARVKAQSGVMTAETGT 452
+ + +G+ Y+H +IIHRDLK +NL ++E+ +K+ DFG+AR MT T
Sbjct: 128 QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGYVAT 185
Query: 453 YRWMAPEV-IEHKPYDHKADVFSFGIVLWELLTGK 486
+ APE+ + Y+ D++S G ++ ELLTG+
Sbjct: 186 RWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 82.0 bits (201), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 104/215 (48%), Gaps = 25/215 (11%)
Query: 286 VWEIDPKHLKFGSKVASGSYGDLYRG--TYCSQDVAIKVLKPERINSDMQKEFAQEVFIM 343
+WE+ P+ + S V SG+YG + T VA+K L + K +E+ ++
Sbjct: 17 IWEV-PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL 75
Query: 344 RKVRHKNVVQFIGACTKPPSL------CIVTEFMSGGSVYDYLHKLKGVFKLPSLLK--- 394
+ ++H+NV+ + T SL +VT M L + K L
Sbjct: 76 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGA--------DLNNIVKCQKLTDDHV 127
Query: 395 --VAIDVSKGMNYLHQNNIIHRDLKAANLLMDENEVVKVADFGVARVKAQSGVMTAETGT 452
+ + +G+ Y+H +IIHRDLK +NL ++E+ +K+ DFG+AR MT T
Sbjct: 128 QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGYVAT 185
Query: 453 YRWMAPEV-IEHKPYDHKADVFSFGIVLWELLTGK 486
+ APE+ + Y+ D++S G ++ ELLTG+
Sbjct: 186 RWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 82.0 bits (201), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 65/240 (27%), Positives = 116/240 (48%), Gaps = 36/240 (15%)
Query: 286 VWEIDPKHLKFGSKVASGSYGDLYRGTYCSQ-------DVAIKVLKPERINSDMQKEFAQ 338
V+++ P++ S + G+YG CS VAIK + P + Q+ +
Sbjct: 22 VFDVGPRYTNL-SYIGEGAYG-----MVCSAYDNLNKVRVAIKKISPFEHQTYXQRTL-R 74
Query: 339 EVFIMRKVRHKNVVQFIGACTKPPSL------CIVTEFMSGGSVYDYLHKLKGVFKLPS- 391
E+ I+ + RH+N++ I + P++ IV + M L+KL L +
Sbjct: 75 EIKILLRFRHENIIG-INDIIRAPTIEQMKDVYIVQDLMETD-----LYKLLKTQHLSND 128
Query: 392 -LLKVAIDVSKGMNYLHQNNIIHRDLKAANLLMDENEVVKVADFGVARVK----AQSGVM 446
+ + +G+ Y+H N++HRDLK +NLL++ +K+ DFG+ARV +G +
Sbjct: 129 HICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFL 188
Query: 447 TAETGTYRWMAPEV-IEHKPYDHKADVFSFGIVLWELLTGKLPY---EYLTPLQAAVGVV 502
T T + APE+ + K Y D++S G +L E+L+ + + YL L +G++
Sbjct: 189 TEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGIL 248
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 82.0 bits (201), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 65/240 (27%), Positives = 116/240 (48%), Gaps = 36/240 (15%)
Query: 286 VWEIDPKHLKFGSKVASGSYGDLYRGTYCSQ-------DVAIKVLKPERINSDMQKEFAQ 338
V+++ P++ S + G+YG CS VAIK + P + Q+ +
Sbjct: 22 VFDVGPRYTNL-SYIGEGAYG-----MVCSAYDNLNKVRVAIKKISPFEHQTYCQRTL-R 74
Query: 339 EVFIMRKVRHKNVVQFIGACTKPPSL------CIVTEFMSGGSVYDYLHKLKGVFKLPS- 391
E+ I+ + RH+N++ I + P++ IV + M L+KL L +
Sbjct: 75 EIKILLRFRHENIIG-INDIIRAPTIEQMKDVYIVQDLMETD-----LYKLLKTQHLSND 128
Query: 392 -LLKVAIDVSKGMNYLHQNNIIHRDLKAANLLMDENEVVKVADFGVARVK----AQSGVM 446
+ + +G+ Y+H N++HRDLK +NLL++ +K+ DFG+ARV +G +
Sbjct: 129 HICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFL 188
Query: 447 TAETGTYRWMAPEV-IEHKPYDHKADVFSFGIVLWELLTGKLPY---EYLTPLQAAVGVV 502
T T + APE+ + K Y D++S G +L E+L+ + + YL L +G++
Sbjct: 189 TEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGIL 248
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 82.0 bits (201), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 104/215 (48%), Gaps = 25/215 (11%)
Query: 286 VWEIDPKHLKFGSKVASGSYGDLYRG--TYCSQDVAIKVLKPERINSDMQKEFAQEVFIM 343
+WE+ P+ + S V SG+YG + T VA+K L + K +E+ ++
Sbjct: 17 IWEV-PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL 75
Query: 344 RKVRHKNVVQFIGACTKPPSL------CIVTEFMSGGSVYDYLHKLKGVFKLPSLLK--- 394
+ ++H+NV+ + T SL +VT M L + K L
Sbjct: 76 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGA--------DLNNIVKCQKLTDDHV 127
Query: 395 --VAIDVSKGMNYLHQNNIIHRDLKAANLLMDENEVVKVADFGVARVKAQSGVMTAETGT 452
+ + +G+ Y+H +IIHRDLK +NL ++E+ +K+ DFG+AR MT T
Sbjct: 128 QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGYVAT 185
Query: 453 YRWMAPEV-IEHKPYDHKADVFSFGIVLWELLTGK 486
+ APE+ + Y+ D++S G ++ ELLTG+
Sbjct: 186 RWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 82.0 bits (201), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 103/209 (49%), Gaps = 11/209 (5%)
Query: 294 LKFGSKVASGSYGD--LYRGTYCSQDVAIKVLKPERINSDMQKEF-AQEVFIMRKVRHKN 350
KFG + GS+ L R S++ AIK+L+ I + + + +E +M ++ H
Sbjct: 35 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 94
Query: 351 VVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNN 410
V+ L + G + Y+ K+ G F ++ + YLH
Sbjct: 95 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKI-GSFDETCTRFYTAEIVSALEYLHGKG 153
Query: 411 IIHRDLKAANLLMDENEVVKVADFGVARV---KAQSGVMTAETGTYRWMAPEVIEHKPYD 467
IIHRDLK N+L++E+ +++ DFG A+V +++ + GT ++++PE++ K
Sbjct: 154 IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEKSAC 213
Query: 468 HKADVFSFGIVLWELLTGKLPY----EYL 492
+D+++ G ++++L+ G P+ EYL
Sbjct: 214 KSSDLWALGCIIYQLVAGLPPFRAGNEYL 242
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 82.0 bits (201), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 104/215 (48%), Gaps = 25/215 (11%)
Query: 286 VWEIDPKHLKFGSKVASGSYGDLYRG--TYCSQDVAIKVLKPERINSDMQKEFAQEVFIM 343
+WE+ P+ + S V SG+YG + T VA+K L + K +E+ ++
Sbjct: 24 IWEV-PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL 82
Query: 344 RKVRHKNVVQFIGACTKPPSL------CIVTEFMSGGSVYDYLHKLKGVFKLPSLLK--- 394
+ ++H+NV+ + T SL +VT M L + K L
Sbjct: 83 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGA--------DLNNIVKCQKLTDDHV 134
Query: 395 --VAIDVSKGMNYLHQNNIIHRDLKAANLLMDENEVVKVADFGVARVKAQSGVMTAETGT 452
+ + +G+ Y+H +IIHRDLK +NL ++E+ +K+ DFG+AR MT T
Sbjct: 135 QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGYVAT 192
Query: 453 YRWMAPEV-IEHKPYDHKADVFSFGIVLWELLTGK 486
+ APE+ + Y+ D++S G ++ ELLTG+
Sbjct: 193 RWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 82.0 bits (201), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 104/215 (48%), Gaps = 25/215 (11%)
Query: 286 VWEIDPKHLKFGSKVASGSYGDLYRG--TYCSQDVAIKVLKPERINSDMQKEFAQEVFIM 343
+WE+ P+ + S V SG+YG + T VA+K L + K +E+ ++
Sbjct: 23 IWEV-PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL 81
Query: 344 RKVRHKNVVQFIGACTKPPSL------CIVTEFMSGGSVYDYLHKLKGVFKLPSLLK--- 394
+ ++H+NV+ + T SL +VT M L + K L
Sbjct: 82 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGA--------DLNNIVKCQKLTDDHV 133
Query: 395 --VAIDVSKGMNYLHQNNIIHRDLKAANLLMDENEVVKVADFGVARVKAQSGVMTAETGT 452
+ + +G+ Y+H +IIHRDLK +NL ++E+ +K+ DFG+AR MT T
Sbjct: 134 QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGYVAT 191
Query: 453 YRWMAPEV-IEHKPYDHKADVFSFGIVLWELLTGK 486
+ APE+ + Y+ D++S G ++ ELLTG+
Sbjct: 192 RWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 82.0 bits (201), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 58/197 (29%), Positives = 103/197 (52%), Gaps = 16/197 (8%)
Query: 299 KVASGSYGDLYRGTYCSQDVAIKVLKPERINSDMQKE-----FAQEVFIMRKVRHKNVVQ 353
KV G+YG +Y+ ++D +++ +RI D + E +E+ +++++ H N+V
Sbjct: 28 KVGEGTYGVVYK----AKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVS 83
Query: 354 FIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIH 413
I L +V EFM + L + K + + + +G+ + HQ+ I+H
Sbjct: 84 LIDVIHSERCLTLVFEFMEK-DLKKVLDENKTGLQDSQIKIYLYQLLRGVAHCHQHRILH 142
Query: 414 RDLKAANLLMDENEVVKVADFGVAR---VKAQSGVMTAETGTYRWMAPEVI-EHKPYDHK 469
RDLK NLL++ + +K+ADFG+AR + +S T E T + AP+V+ K Y
Sbjct: 143 RDLKPQNLLINSDGALKLADFGLARAFGIPVRS--YTHEVVTLWYRAPDVLMGSKKYSTS 200
Query: 470 ADVFSFGIVLWELLTGK 486
D++S G + E++TGK
Sbjct: 201 VDIWSIGCIFAEMITGK 217
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 82.0 bits (201), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 104/215 (48%), Gaps = 25/215 (11%)
Query: 286 VWEIDPKHLKFGSKVASGSYGDLYRG--TYCSQDVAIKVLKPERINSDMQKEFAQEVFIM 343
+WE+ P+ + S V SG+YG + T VA+K L + K +E+ ++
Sbjct: 19 IWEV-PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL 77
Query: 344 RKVRHKNVVQFIGACTKPPSL------CIVTEFMSGGSVYDYLHKLKGVFKLPSLLK--- 394
+ ++H+NV+ + T SL +VT M L + K L
Sbjct: 78 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGA--------DLNNIVKCQKLTDDHV 129
Query: 395 --VAIDVSKGMNYLHQNNIIHRDLKAANLLMDENEVVKVADFGVARVKAQSGVMTAETGT 452
+ + +G+ Y+H +IIHRDLK +NL ++E+ +K+ DFG+AR MT T
Sbjct: 130 QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGYVAT 187
Query: 453 YRWMAPEV-IEHKPYDHKADVFSFGIVLWELLTGK 486
+ APE+ + Y+ D++S G ++ ELLTG+
Sbjct: 188 RWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 82.0 bits (201), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 104/215 (48%), Gaps = 25/215 (11%)
Query: 286 VWEIDPKHLKFGSKVASGSYGDLYRG--TYCSQDVAIKVLKPERINSDMQKEFAQEVFIM 343
+WE+ P+ + S V SG+YG + T VA+K L + K +E+ ++
Sbjct: 19 IWEV-PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL 77
Query: 344 RKVRHKNVVQFIGACTKPPSL------CIVTEFMSGGSVYDYLHKLKGVFKLPSLLK--- 394
+ ++H+NV+ + T SL +VT M L + K L
Sbjct: 78 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGA--------DLNNIVKCQKLTDDHV 129
Query: 395 --VAIDVSKGMNYLHQNNIIHRDLKAANLLMDENEVVKVADFGVARVKAQSGVMTAETGT 452
+ + +G+ Y+H +IIHRDLK +NL ++E+ +K+ DFG+AR MT T
Sbjct: 130 QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGYVAT 187
Query: 453 YRWMAPEV-IEHKPYDHKADVFSFGIVLWELLTGK 486
+ APE+ + Y+ D++S G ++ ELLTG+
Sbjct: 188 RWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 82.0 bits (201), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 104/215 (48%), Gaps = 25/215 (11%)
Query: 286 VWEIDPKHLKFGSKVASGSYGDLYRG--TYCSQDVAIKVLKPERINSDMQKEFAQEVFIM 343
+WE+ P+ + S V SG+YG + T VA+K L + K +E+ ++
Sbjct: 17 IWEV-PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL 75
Query: 344 RKVRHKNVVQFIGACTKPPSL------CIVTEFMSGGSVYDYLHKLKGVFKLPSLLK--- 394
+ ++H+NV+ + T SL +VT M L + K L
Sbjct: 76 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGA--------DLNNIVKCQKLTDDHV 127
Query: 395 --VAIDVSKGMNYLHQNNIIHRDLKAANLLMDENEVVKVADFGVARVKAQSGVMTAETGT 452
+ + +G+ Y+H +IIHRDLK +NL ++E+ +K+ DFG+AR MT T
Sbjct: 128 QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGYVAT 185
Query: 453 YRWMAPEV-IEHKPYDHKADVFSFGIVLWELLTGK 486
+ APE+ + Y+ D++S G ++ ELLTG+
Sbjct: 186 RWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 82.0 bits (201), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 104/215 (48%), Gaps = 25/215 (11%)
Query: 286 VWEIDPKHLKFGSKVASGSYGDLYRG--TYCSQDVAIKVLKPERINSDMQKEFAQEVFIM 343
+WE+ P+ + S V SG+YG + T VA+K L + K +E+ ++
Sbjct: 17 IWEV-PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL 75
Query: 344 RKVRHKNVVQFIGACTKPPSL------CIVTEFMSGGSVYDYLHKLKGVFKLPSLLK--- 394
+ ++H+NV+ + T SL +VT M L + K L
Sbjct: 76 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGA--------DLNNIVKCQKLTDDHV 127
Query: 395 --VAIDVSKGMNYLHQNNIIHRDLKAANLLMDENEVVKVADFGVARVKAQSGVMTAETGT 452
+ + +G+ Y+H +IIHRDLK +NL ++E+ +K+ DFG+AR MT T
Sbjct: 128 QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGYVAT 185
Query: 453 YRWMAPEV-IEHKPYDHKADVFSFGIVLWELLTGK 486
+ APE+ + Y+ D++S G ++ ELLTG+
Sbjct: 186 RWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 82.0 bits (201), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 104/215 (48%), Gaps = 25/215 (11%)
Query: 286 VWEIDPKHLKFGSKVASGSYGDLYRG--TYCSQDVAIKVLKPERINSDMQKEFAQEVFIM 343
+WE+ P+ + S V SG+YG + T VA+K L + K +E+ ++
Sbjct: 36 IWEV-PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL 94
Query: 344 RKVRHKNVVQFIGACTKPPSL------CIVTEFMSGGSVYDYLHKLKGVFKLPSLLK--- 394
+ ++H+NV+ + T SL +VT M L + K L
Sbjct: 95 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGA--------DLNNIVKCQKLTDDHV 146
Query: 395 --VAIDVSKGMNYLHQNNIIHRDLKAANLLMDENEVVKVADFGVARVKAQSGVMTAETGT 452
+ + +G+ Y+H +IIHRDLK +NL ++E+ +K+ DFG+AR MT T
Sbjct: 147 QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGYVAT 204
Query: 453 YRWMAPEV-IEHKPYDHKADVFSFGIVLWELLTGK 486
+ APE+ + Y+ D++S G ++ ELLTG+
Sbjct: 205 RWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 239
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 81.6 bits (200), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 104/215 (48%), Gaps = 25/215 (11%)
Query: 286 VWEIDPKHLKFGSKVASGSYGDLYRG--TYCSQDVAIKVLKPERINSDMQKEFAQEVFIM 343
+WE+ P+ + S V SG+YG + T VA+K L + K +E+ ++
Sbjct: 22 IWEV-PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL 80
Query: 344 RKVRHKNVVQFIGACTKPPSL------CIVTEFMSGGSVYDYLHKLKGVFKLPSLLK--- 394
+ ++H+NV+ + T SL +VT M L + K L
Sbjct: 81 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGA--------DLNNIVKCQKLTDDHV 132
Query: 395 --VAIDVSKGMNYLHQNNIIHRDLKAANLLMDENEVVKVADFGVARVKAQSGVMTAETGT 452
+ + +G+ Y+H +IIHRDLK +NL ++E+ +K+ DFG+AR MT T
Sbjct: 133 QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGYVAT 190
Query: 453 YRWMAPEV-IEHKPYDHKADVFSFGIVLWELLTGK 486
+ APE+ + Y+ D++S G ++ ELLTG+
Sbjct: 191 RWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 81.6 bits (200), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 104/215 (48%), Gaps = 25/215 (11%)
Query: 286 VWEIDPKHLKFGSKVASGSYGDLYRG--TYCSQDVAIKVLKPERINSDMQKEFAQEVFIM 343
+WE+ P+ + S V SG+YG + T VA+K L + K +E+ ++
Sbjct: 37 IWEV-PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL 95
Query: 344 RKVRHKNVVQFIGACTKPPSL------CIVTEFMSGGSVYDYLHKLKGVFKLPSLLK--- 394
+ ++H+NV+ + T SL +VT M L + K L
Sbjct: 96 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGA--------DLNNIVKCQKLTDDHV 147
Query: 395 --VAIDVSKGMNYLHQNNIIHRDLKAANLLMDENEVVKVADFGVARVKAQSGVMTAETGT 452
+ + +G+ Y+H +IIHRDLK +NL ++E+ +K+ DFG+AR MT T
Sbjct: 148 QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGYVAT 205
Query: 453 YRWMAPEV-IEHKPYDHKADVFSFGIVLWELLTGK 486
+ APE+ + Y+ D++S G ++ ELLTG+
Sbjct: 206 RWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 240
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 81.6 bits (200), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 104/215 (48%), Gaps = 25/215 (11%)
Query: 286 VWEIDPKHLKFGSKVASGSYGDLYRG--TYCSQDVAIKVLKPERINSDMQKEFAQEVFIM 343
+WE+ P+ + S V SG+YG + T VA+K L + K +E+ ++
Sbjct: 17 IWEV-PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL 75
Query: 344 RKVRHKNVVQFIGACTKPPSL------CIVTEFMSGGSVYDYLHKLKGVFKLPSLLK--- 394
+ ++H+NV+ + T SL +VT M L + K L
Sbjct: 76 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGA--------DLNNIVKXQKLTDDHV 127
Query: 395 --VAIDVSKGMNYLHQNNIIHRDLKAANLLMDENEVVKVADFGVARVKAQSGVMTAETGT 452
+ + +G+ Y+H +IIHRDLK +NL ++E+ +K+ DFG+AR MT T
Sbjct: 128 QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGYVAT 185
Query: 453 YRWMAPEV-IEHKPYDHKADVFSFGIVLWELLTGK 486
+ APE+ + Y+ D++S G ++ ELLTG+
Sbjct: 186 RWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 81.6 bits (200), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 104/215 (48%), Gaps = 25/215 (11%)
Query: 286 VWEIDPKHLKFGSKVASGSYGDLYRG--TYCSQDVAIKVLKPERINSDMQKEFAQEVFIM 343
+WE+ P+ + S V SG+YG + T VA+K L + K +E+ ++
Sbjct: 17 IWEV-PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL 75
Query: 344 RKVRHKNVVQFIGACTKPPSL------CIVTEFMSGGSVYDYLHKLKGVFKLPSLLK--- 394
+ ++H+NV+ + T SL +VT M L + K L
Sbjct: 76 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGA--------DLNNIVKCQKLTDDHV 127
Query: 395 --VAIDVSKGMNYLHQNNIIHRDLKAANLLMDENEVVKVADFGVARVKAQSGVMTAETGT 452
+ + +G+ Y+H +IIHRDLK +NL ++E+ +K+ DFG+AR MT T
Sbjct: 128 QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGYVAT 185
Query: 453 YRWMAPEV-IEHKPYDHKADVFSFGIVLWELLTGK 486
+ APE+ + Y+ D++S G ++ ELLTG+
Sbjct: 186 RWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 81.6 bits (200), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 94/204 (46%), Gaps = 32/204 (15%)
Query: 300 VASGSYGDLYRG--TYCSQDVAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQFIGA 357
+ SG+ G + ++VAIK L N K +E+ +M+ V HKN++ +
Sbjct: 32 IGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKVVNHKNIIGLLNV 91
Query: 358 CTKPPSL------CIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSK---------- 401
T SL IV E M L ++++ +D +
Sbjct: 92 FTPQKSLEEFQDVYIVMELMDAN--------------LSQVIQMELDHERMSYLLYQMLV 137
Query: 402 GMNYLHQNNIIHRDLKAANLLMDENEVVKVADFGVARVKAQSGVMTAETGTYRWMAPEVI 461
G+ +LH IIHRDLK +N+++ + +K+ DFG+AR S +MT T + APEVI
Sbjct: 138 GIKHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVI 197
Query: 462 EHKPYDHKADVFSFGIVLWELLTG 485
Y D++S G+++ E++ G
Sbjct: 198 LGMGYKENVDIWSVGVIMGEMIKG 221
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 81.6 bits (200), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 104/215 (48%), Gaps = 25/215 (11%)
Query: 286 VWEIDPKHLKFGSKVASGSYGDLYRG--TYCSQDVAIKVLKPERINSDMQKEFAQEVFIM 343
+WE+ P+ + S V SG+YG + T VA+K L + K +E+ ++
Sbjct: 29 IWEV-PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL 87
Query: 344 RKVRHKNVVQFIGACTKPPSL------CIVTEFMSGGSVYDYLHKLKGVFKLPSLLK--- 394
+ ++H+NV+ + T SL +VT M L + K L
Sbjct: 88 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGA--------DLNNIVKCQKLTDDHV 139
Query: 395 --VAIDVSKGMNYLHQNNIIHRDLKAANLLMDENEVVKVADFGVARVKAQSGVMTAETGT 452
+ + +G+ Y+H +IIHRDLK +NL ++E+ +K+ DFG+AR MT T
Sbjct: 140 QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGYVAT 197
Query: 453 YRWMAPEV-IEHKPYDHKADVFSFGIVLWELLTGK 486
+ APE+ + Y+ D++S G ++ ELLTG+
Sbjct: 198 RWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 232
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 81.6 bits (200), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 104/215 (48%), Gaps = 25/215 (11%)
Query: 286 VWEIDPKHLKFGSKVASGSYGDLYRG--TYCSQDVAIKVLKPERINSDMQKEFAQEVFIM 343
+WE+ P+ + S V SG+YG + T VA+K L + K +E+ ++
Sbjct: 29 IWEV-PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL 87
Query: 344 RKVRHKNVVQFIGACTKPPSL------CIVTEFMSGGSVYDYLHKLKGVFKLPSLLK--- 394
+ ++H+NV+ + T SL +VT M L + K L
Sbjct: 88 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGA--------DLNNIVKCQKLTDDHV 139
Query: 395 --VAIDVSKGMNYLHQNNIIHRDLKAANLLMDENEVVKVADFGVARVKAQSGVMTAETGT 452
+ + +G+ Y+H +IIHRDLK +NL ++E+ +K+ DFG+AR MT T
Sbjct: 140 QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGYVAT 197
Query: 453 YRWMAPEV-IEHKPYDHKADVFSFGIVLWELLTGK 486
+ APE+ + Y+ D++S G ++ ELLTG+
Sbjct: 198 RWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 232
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 81.6 bits (200), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 104/215 (48%), Gaps = 25/215 (11%)
Query: 286 VWEIDPKHLKFGSKVASGSYGDLYRG--TYCSQDVAIKVLKPERINSDMQKEFAQEVFIM 343
+WE+ P+ + S V SG+YG + T VA+K L + K +E+ ++
Sbjct: 14 IWEV-PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL 72
Query: 344 RKVRHKNVVQFIGACTKPPSL------CIVTEFMSGGSVYDYLHKLKGVFKLPSLLK--- 394
+ ++H+NV+ + T SL +VT M L + K L
Sbjct: 73 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGA--------DLNNIVKCQKLTDDHV 124
Query: 395 --VAIDVSKGMNYLHQNNIIHRDLKAANLLMDENEVVKVADFGVARVKAQSGVMTAETGT 452
+ + +G+ Y+H +IIHRDLK +NL ++E+ +K+ DFG+AR MT T
Sbjct: 125 QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGYVAT 182
Query: 453 YRWMAPEV-IEHKPYDHKADVFSFGIVLWELLTGK 486
+ APE+ + Y+ D++S G ++ ELLTG+
Sbjct: 183 RWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 217
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 81.6 bits (200), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 104/215 (48%), Gaps = 25/215 (11%)
Query: 286 VWEIDPKHLKFGSKVASGSYGDLYRG--TYCSQDVAIKVLKPERINSDMQKEFAQEVFIM 343
+WE+ P+ + S V SG+YG + T VA+K L + K +E+ ++
Sbjct: 40 IWEV-PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL 98
Query: 344 RKVRHKNVVQFIGACTKPPSL------CIVTEFMSGGSVYDYLHKLKGVFKLPSLLK--- 394
+ ++H+NV+ + T SL +VT M L + K L
Sbjct: 99 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGA--------DLNNIVKCQKLTDDHV 150
Query: 395 --VAIDVSKGMNYLHQNNIIHRDLKAANLLMDENEVVKVADFGVARVKAQSGVMTAETGT 452
+ + +G+ Y+H +IIHRDLK +NL ++E+ +K+ DFG+AR MT T
Sbjct: 151 QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGYVAT 208
Query: 453 YRWMAPEV-IEHKPYDHKADVFSFGIVLWELLTGK 486
+ APE+ + Y+ D++S G ++ ELLTG+
Sbjct: 209 RWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 243
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 81.6 bits (200), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 65/240 (27%), Positives = 116/240 (48%), Gaps = 36/240 (15%)
Query: 286 VWEIDPKHLKFGSKVASGSYGDLYRGTYCSQ-------DVAIKVLKPERINSDMQKEFAQ 338
V+++ P++ S + G+YG CS VAIK + P + Q+ +
Sbjct: 18 VFDVGPRYTNL-SYIGEGAYG-----MVCSAYDNVNKVRVAIKKISPFEHQTYCQRTL-R 70
Query: 339 EVFIMRKVRHKNVVQFIGACTKPPSL------CIVTEFMSGGSVYDYLHKLKGVFKLPS- 391
E+ I+ + RH+N++ I + P++ IV + M L+KL L +
Sbjct: 71 EIKILLRFRHENIIG-INDIIRAPTIEQMKDVYIVQDLMETD-----LYKLLKTQHLSND 124
Query: 392 -LLKVAIDVSKGMNYLHQNNIIHRDLKAANLLMDENEVVKVADFGVARVK----AQSGVM 446
+ + +G+ Y+H N++HRDLK +NLL++ +K+ DFG+ARV +G +
Sbjct: 125 HICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTXDLKIXDFGLARVADPDHDHTGFL 184
Query: 447 TAETGTYRWMAPEV-IEHKPYDHKADVFSFGIVLWELLTGKLPY---EYLTPLQAAVGVV 502
T T + APE+ + K Y D++S G +L E+L+ + + YL L +G++
Sbjct: 185 TEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGIL 244
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 81.6 bits (200), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 104/215 (48%), Gaps = 25/215 (11%)
Query: 286 VWEIDPKHLKFGSKVASGSYGDLYRG--TYCSQDVAIKVLKPERINSDMQKEFAQEVFIM 343
+WE+ P+ + S V SG+YG + T VA+K L + K +E+ ++
Sbjct: 17 IWEV-PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL 75
Query: 344 RKVRHKNVVQFIGACTKPPSL------CIVTEFMSGGSVYDYLHKLKGVFKLPSLLK--- 394
+ ++H+NV+ + T SL +VT M L + K L
Sbjct: 76 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGA--------DLNNIVKCQKLTDDHV 127
Query: 395 --VAIDVSKGMNYLHQNNIIHRDLKAANLLMDENEVVKVADFGVARVKAQSGVMTAETGT 452
+ + +G+ Y+H +IIHRDLK +NL ++E+ +K+ DFG+AR MT T
Sbjct: 128 QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGYVAT 185
Query: 453 YRWMAPEV-IEHKPYDHKADVFSFGIVLWELLTGK 486
+ APE+ + Y+ D++S G ++ ELLTG+
Sbjct: 186 RWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 81.6 bits (200), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 104/215 (48%), Gaps = 25/215 (11%)
Query: 286 VWEIDPKHLKFGSKVASGSYGDLYRG--TYCSQDVAIKVLKPERINSDMQKEFAQEVFIM 343
+WE+ P+ + S V SG+YG + T VA+K L + K +E+ ++
Sbjct: 13 IWEV-PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL 71
Query: 344 RKVRHKNVVQFIGACTKPPSL------CIVTEFMSGGSVYDYLHKLKGVFKLPSLLK--- 394
+ ++H+NV+ + T SL +VT M L + K L
Sbjct: 72 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGA--------DLNNIVKCQKLTDDHV 123
Query: 395 --VAIDVSKGMNYLHQNNIIHRDLKAANLLMDENEVVKVADFGVARVKAQSGVMTAETGT 452
+ + +G+ Y+H +IIHRDLK +NL ++E+ +K+ DFG+AR MT T
Sbjct: 124 QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGYVAT 181
Query: 453 YRWMAPEV-IEHKPYDHKADVFSFGIVLWELLTGK 486
+ APE+ + Y+ D++S G ++ ELLTG+
Sbjct: 182 RWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 81.6 bits (200), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 58/197 (29%), Positives = 103/197 (52%), Gaps = 16/197 (8%)
Query: 299 KVASGSYGDLYRGTYCSQDVAIKVLKPERINSDMQKE-----FAQEVFIMRKVRHKNVVQ 353
KV G+YG +Y+ ++D +++ +RI D + E +E+ +++++ H N+V
Sbjct: 28 KVGEGTYGVVYK----AKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVS 83
Query: 354 FIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIH 413
I L +V EFM + L + K + + + +G+ + HQ+ I+H
Sbjct: 84 LIDVIHSERCLTLVFEFMEK-DLKKVLDENKTGLQDSQIKIYLYQLLRGVAHCHQHRILH 142
Query: 414 RDLKAANLLMDENEVVKVADFGVAR---VKAQSGVMTAETGTYRWMAPEVI-EHKPYDHK 469
RDLK NLL++ + +K+ADFG+AR + +S T E T + AP+V+ K Y
Sbjct: 143 RDLKPQNLLINSDGALKLADFGLARAFGIPVRS--YTHEVVTLWYRAPDVLMGSKKYSTS 200
Query: 470 ADVFSFGIVLWELLTGK 486
D++S G + E++TGK
Sbjct: 201 VDIWSIGCIFAEMITGK 217
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 104/215 (48%), Gaps = 25/215 (11%)
Query: 286 VWEIDPKHLKFGSKVASGSYGDLYRG--TYCSQDVAIKVLKPERINSDMQKEFAQEVFIM 343
+WE+ P+ + + V SG+YG + T VA+K L + K +E+ ++
Sbjct: 27 IWEV-PERYQNLAPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLL 85
Query: 344 RKVRHKNVVQFIGACTKPPSL------CIVTEFMSGGSVYDYLHKLKGVFKLPSLLK--- 394
+ ++H+NV+ + T SL +VT M L + K L
Sbjct: 86 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGA--------DLNNIVKCQKLTDDHV 137
Query: 395 --VAIDVSKGMNYLHQNNIIHRDLKAANLLMDENEVVKVADFGVARVKAQSGVMTAETGT 452
+ + +G+ Y+H +IIHRDLK +NL ++E+ +K+ DFG+AR MT T
Sbjct: 138 QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGYVAT 195
Query: 453 YRWMAPEV-IEHKPYDHKADVFSFGIVLWELLTGK 486
+ APE+ + Y+ D++S G ++ ELLTG+
Sbjct: 196 RWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 230
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 47/179 (26%), Positives = 90/179 (50%), Gaps = 5/179 (2%)
Query: 316 QDVAIKVLKPERINSDMQKEFAQEVFIMRKVRH-KNVVQFIGACTKPPSLCIVTEFMSGG 374
Q+ A K LK R D + E E+ ++ + V+ + ++ E+ +GG
Sbjct: 55 QEYAAKFLKKRRRGQDCRAEILHEIAVLELAKSCPRVINLHEVYENTSEIILILEYAAGG 114
Query: 375 SVYDY-LHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDLKAANLLMDENEV---VK 430
++ L +L + ++++ + +G+ YLHQNNI+H DLK N+L+ +K
Sbjct: 115 EIFSLCLPELAEMVSENDVIRLIKQILEGVYYLHQNNIVHLDLKPQNILLSSIYPLGDIK 174
Query: 431 VADFGVARVKAQSGVMTAETGTYRWMAPEVIEHKPYDHKADVFSFGIVLWELLTGKLPY 489
+ DFG++R + + GT ++APE++ + P D+++ GI+ + LLT P+
Sbjct: 175 IVDFGMSRKIGHACELREIMGTPEYLAPEILNYDPITTATDMWNIGIIAYMLLTHTSPF 233
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 104/215 (48%), Gaps = 25/215 (11%)
Query: 286 VWEIDPKHLKFGSKVASGSYGDLYRG--TYCSQDVAIKVLKPERINSDMQKEFAQEVFIM 343
+WE+ P+ + S V SG+YG + T VA+K L + K +E+ ++
Sbjct: 28 IWEV-PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL 86
Query: 344 RKVRHKNVVQFIGACTKPPSL------CIVTEFMSGGSVYDYLHKLKGVFKLPSLLK--- 394
+ ++H+NV+ + T SL +VT M L + K L
Sbjct: 87 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGA--------DLNNIVKCQKLTDDHV 138
Query: 395 --VAIDVSKGMNYLHQNNIIHRDLKAANLLMDENEVVKVADFGVARVKAQSGVMTAETGT 452
+ + +G+ Y+H +IIHRDLK +NL ++E+ +K+ DFG+AR MT T
Sbjct: 139 QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGYVAT 196
Query: 453 YRWMAPEV-IEHKPYDHKADVFSFGIVLWELLTGK 486
+ APE+ + Y+ D++S G ++ ELLTG+
Sbjct: 197 RWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 231
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 104/215 (48%), Gaps = 25/215 (11%)
Query: 286 VWEIDPKHLKFGSKVASGSYGDLYRG--TYCSQDVAIKVLKPERINSDMQKEFAQEVFIM 343
+WE+ P+ + S V SG+YG + T VA+K L + K +E+ ++
Sbjct: 14 IWEV-PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL 72
Query: 344 RKVRHKNVVQFIGACTKPPSL------CIVTEFMSGGSVYDYLHKLKGVFKLPSLLK--- 394
+ ++H+NV+ + T SL +VT M L + K L
Sbjct: 73 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGA--------DLNNIVKCQKLTDDHV 124
Query: 395 --VAIDVSKGMNYLHQNNIIHRDLKAANLLMDENEVVKVADFGVARVKAQSGVMTAETGT 452
+ + +G+ Y+H +IIHRDLK +NL ++E+ +K+ DFG+AR MT T
Sbjct: 125 QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGYVAT 182
Query: 453 YRWMAPEV-IEHKPYDHKADVFSFGIVLWELLTGK 486
+ APE+ + Y+ D++S G ++ ELLTG+
Sbjct: 183 RWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 217
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 99/202 (49%), Gaps = 7/202 (3%)
Query: 294 LKFGSKVASGSYGD--LYRGTYCSQDVAIKVLKPERINSDMQKEF-AQEVFIMRKVRHKN 350
KFG + GS+ L R S++ AIK+L+ I + + + +E +M ++ H
Sbjct: 34 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 93
Query: 351 VVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNN 410
V+ L + G + Y+ K+ G F ++ + YLH
Sbjct: 94 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKI-GSFDETCTRFYTAEIVSALEYLHGKG 152
Query: 411 IIHRDLKAANLLMDENEVVKVADFGVARV---KAQSGVMTAETGTYRWMAPEVIEHKPYD 467
IIHRDLK N+L++E+ +++ DFG A+V +++ GT ++++PE++ K
Sbjct: 153 IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSAX 212
Query: 468 HKADVFSFGIVLWELLTGKLPY 489
+D+++ G ++++L+ G P+
Sbjct: 213 KSSDLWALGCIIYQLVAGLPPF 234
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 49/196 (25%), Positives = 99/196 (50%), Gaps = 10/196 (5%)
Query: 300 VASGSYGDLYRG--TYCSQDVAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQFIGA 357
+ G +G +++ T +A K++K + ++E E+ +M ++ H N++Q A
Sbjct: 97 LGGGRFGQVHKCEETATGLKLAAKIIKTRGMKD--KEEVKNEISVMNQLDHANLIQLYDA 154
Query: 358 CTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAI--DVSKGMNYLHQNNIIHRD 415
+ +V E++ GG ++D + + + L L + + +G+ ++HQ I+H D
Sbjct: 155 FESKNDIVLVMEYVDGGELFDRI--IDESYNLTELDTILFMKQICEGIRHMHQMYILHLD 212
Query: 416 LKAANLLMDENEV--VKVADFGVARVKAQSGVMTAETGTYRWMAPEVIEHKPYDHKADVF 473
LK N+L + +K+ DFG+AR + GT ++APEV+ + D++
Sbjct: 213 LKPENILCVNRDAKQIKIIDFGLARRYKPREKLKVNFGTPEFLAPEVVNYDFVSFPTDMW 272
Query: 474 SFGIVLWELLTGKLPY 489
S G++ + LL+G P+
Sbjct: 273 SVGVIAYMLLSGLSPF 288
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 104/215 (48%), Gaps = 25/215 (11%)
Query: 286 VWEIDPKHLKFGSKVASGSYGDLYRG--TYCSQDVAIKVLKPERINSDMQKEFAQEVFIM 343
+WE+ P+ + S V SG+YG + T VA+K L + K +E+ ++
Sbjct: 15 IWEV-PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL 73
Query: 344 RKVRHKNVVQFIGACTKPPSL------CIVTEFMSGGSVYDYLHKLKGVFKLPSLLK--- 394
+ ++H+NV+ + T SL +VT M L + K L
Sbjct: 74 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGA--------DLNNIVKCQKLTDDHV 125
Query: 395 --VAIDVSKGMNYLHQNNIIHRDLKAANLLMDENEVVKVADFGVARVKAQSGVMTAETGT 452
+ + +G+ Y+H +IIHRDLK +NL ++E+ +K+ DFG+AR MT T
Sbjct: 126 QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGYVAT 183
Query: 453 YRWMAPEV-IEHKPYDHKADVFSFGIVLWELLTGK 486
+ APE+ + Y+ D++S G ++ ELLTG+
Sbjct: 184 RWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 218
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 102/209 (48%), Gaps = 11/209 (5%)
Query: 294 LKFGSKVASGSYGD--LYRGTYCSQDVAIKVLKPERINSDMQKEF-AQEVFIMRKVRHKN 350
KFG + GS+ L R S++ AIK+L+ I + + + +E +M ++ H
Sbjct: 39 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 98
Query: 351 VVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNN 410
V+ L + G + Y+ K+ G F ++ + YLH
Sbjct: 99 FVKLYFCFQDDEKLYFGLSYAKNGELLKYIRKI-GSFDETCTRFYTAEIVSALEYLHGKG 157
Query: 411 IIHRDLKAANLLMDENEVVKVADFGVARV---KAQSGVMTAETGTYRWMAPEVIEHKPYD 467
IIHRDLK N+L++E+ +++ DFG A+V +++ GT ++++PE++ K
Sbjct: 158 IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSAC 217
Query: 468 HKADVFSFGIVLWELLTGKLPY----EYL 492
+D+++ G ++++L+ G P+ EYL
Sbjct: 218 KSSDLWALGCIIYQLVAGLPPFRAGNEYL 246
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 103/209 (49%), Gaps = 11/209 (5%)
Query: 294 LKFGSKVASGSYGD--LYRGTYCSQDVAIKVLKPERINSDMQKEF-AQEVFIMRKVRHKN 350
KFG + GS+ L R S++ AIK+L+ I + + + +E +M ++ H
Sbjct: 31 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 90
Query: 351 VVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNN 410
V+ L + G + Y+ K+ G F ++ + YLH
Sbjct: 91 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKI-GSFDETCTRFYTAEIVSALEYLHGKG 149
Query: 411 IIHRDLKAANLLMDENEVVKVADFGVARV---KAQSGVMTAETGTYRWMAPEVIEHKPYD 467
IIHRDLK N+L++E+ +++ DFG A+V +++ + GT ++++PE++ K
Sbjct: 150 IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEKSAC 209
Query: 468 HKADVFSFGIVLWELLTGKLPY----EYL 492
+D+++ G ++++L+ G P+ EYL
Sbjct: 210 KSSDLWALGCIIYQLVAGLPPFRAGNEYL 238
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 60/192 (31%), Positives = 106/192 (55%), Gaps = 20/192 (10%)
Query: 315 SQDVAIKVLKPERINSDMQKEFAQEVFIMRKVR-HKNVVQFIGACTKPPSLCIVTEFMSG 373
SQ+ A+K++ E+ ++ +EV ++ + + H+NV++ I + +V E M G
Sbjct: 38 SQEYAVKII--EKQPGHIRSRVFREVEMLYQCQGHRNVLELIEFFEEEDRFYLVFEKMRG 95
Query: 374 GSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDLKAANLLMDE-NEV--VK 430
GS+ ++HK + +L + + V DV+ +++LH I HRDLK N+L + N+V VK
Sbjct: 96 GSILSHIHKRRHFNELEASV-VVQDVASALDFLHNKGIAHRDLKPENILCEHPNQVSPVK 154
Query: 431 VADFGVARVKAQSG----VMTAE----TGTYRWMAPEVI-----EHKPYDHKADVFSFGI 477
+ DFG+ +G + T E G+ +MAPEV+ E YD + D++S G+
Sbjct: 155 ICDFGLGSGIKLNGDCSPISTPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGV 214
Query: 478 VLWELLTGKLPY 489
+L+ LL+G P+
Sbjct: 215 ILYILLSGYPPF 226
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 65/240 (27%), Positives = 116/240 (48%), Gaps = 36/240 (15%)
Query: 286 VWEIDPKHLKFGSKVASGSYGDLYRGTYCSQ-------DVAIKVLKPERINSDMQKEFAQ 338
V+++ P++ S + G+YG CS VAIK + P + Q+ +
Sbjct: 16 VFDVGPRYTNL-SYIGEGAYG-----MVCSAYDNLNKVRVAIKKISPFEHQTYCQRTL-R 68
Query: 339 EVFIMRKVRHKNVVQFIGACTKPPSL------CIVTEFMSGGSVYDYLHKLKGVFKLPS- 391
E+ I+ + RH+N++ I + P++ IV + M L+KL L +
Sbjct: 69 EIKILLRFRHENIIG-INDIIRAPTIEQMKDVYIVQDLMETD-----LYKLLKTQHLSND 122
Query: 392 -LLKVAIDVSKGMNYLHQNNIIHRDLKAANLLMDENEVVKVADFGVARVK----AQSGVM 446
+ + +G+ Y+H N++HRDLK +NLL++ +K+ DFG+ARV +G +
Sbjct: 123 HICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFL 182
Query: 447 TAETGTYRWMAPEV-IEHKPYDHKADVFSFGIVLWELLTGKLPY---EYLTPLQAAVGVV 502
T T + APE+ + K Y D++S G +L E+L+ + + YL L +G++
Sbjct: 183 TEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGIL 242
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 102/209 (48%), Gaps = 11/209 (5%)
Query: 294 LKFGSKVASGSYGD--LYRGTYCSQDVAIKVLKPERINSDMQKEF-AQEVFIMRKVRHKN 350
KFG + GS+ L R S++ AIK+L+ I + + + +E +M ++ H
Sbjct: 32 FKFGKILGEGSFSTTVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 91
Query: 351 VVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNN 410
V+ L + G + Y+ K+ G F ++ + YLH
Sbjct: 92 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKI-GSFDETCTRFYTAEIVSALEYLHGKG 150
Query: 411 IIHRDLKAANLLMDENEVVKVADFGVARV---KAQSGVMTAETGTYRWMAPEVIEHKPYD 467
IIHRDLK N+L++E+ +++ DFG A+V +++ GT ++++PE++ K
Sbjct: 151 IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSAC 210
Query: 468 HKADVFSFGIVLWELLTGKLPY----EYL 492
+D+++ G ++++L+ G P+ EYL
Sbjct: 211 KSSDLWALGCIIYQLVAGLPPFRAGNEYL 239
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 102/209 (48%), Gaps = 11/209 (5%)
Query: 294 LKFGSKVASGSYGD--LYRGTYCSQDVAIKVLKPERINSDMQKEF-AQEVFIMRKVRHKN 350
KFG + GS+ L R S++ AIK+L+ I + + + +E +M ++ H
Sbjct: 32 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 91
Query: 351 VVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNN 410
V+ L + G + Y+ K+ G F ++ + YLH
Sbjct: 92 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKI-GSFDETCTRFYTAEIVSALEYLHGKG 150
Query: 411 IIHRDLKAANLLMDENEVVKVADFGVARV---KAQSGVMTAETGTYRWMAPEVIEHKPYD 467
IIHRDLK N+L++E+ +++ DFG A+V +++ GT ++++PE++ K
Sbjct: 151 IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSAC 210
Query: 468 HKADVFSFGIVLWELLTGKLPY----EYL 492
+D+++ G ++++L+ G P+ EYL
Sbjct: 211 KSSDLWALGCIIYQLVAGLPPFRAGNEYL 239
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 65/240 (27%), Positives = 116/240 (48%), Gaps = 36/240 (15%)
Query: 286 VWEIDPKHLKFGSKVASGSYGDLYRGTYCSQ-------DVAIKVLKPERINSDMQKEFAQ 338
V+++ P++ S + G+YG CS VAIK + P + Q+ +
Sbjct: 18 VFDVGPRYTNL-SYIGEGAYG-----MVCSAYDNVNKVRVAIKKISPFEHQTYCQRTL-R 70
Query: 339 EVFIMRKVRHKNVVQFIGACTKPPSL------CIVTEFMSGGSVYDYLHKLKGVFKLPS- 391
E+ I+ + RH+N++ I + P++ IV + M L+KL L +
Sbjct: 71 EIKILLRFRHENIIG-INDIIRAPTIEQMKDVYIVQDLMETD-----LYKLLKTQHLSND 124
Query: 392 -LLKVAIDVSKGMNYLHQNNIIHRDLKAANLLMDENEVVKVADFGVARVK----AQSGVM 446
+ + +G+ Y+H N++HRDLK +NLL++ +K+ DFG+ARV +G +
Sbjct: 125 HICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFL 184
Query: 447 TAETGTYRWMAPEV-IEHKPYDHKADVFSFGIVLWELLTGKLPY---EYLTPLQAAVGVV 502
T T + APE+ + K Y D++S G +L E+L+ + + YL L +G++
Sbjct: 185 TEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGIL 244
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 65/240 (27%), Positives = 116/240 (48%), Gaps = 36/240 (15%)
Query: 286 VWEIDPKHLKFGSKVASGSYGDLYRGTYCSQ-------DVAIKVLKPERINSDMQKEFAQ 338
V+++ P++ S + G+YG CS VAIK + P + Q+ +
Sbjct: 23 VFDVGPRYTNL-SYIGEGAYG-----MVCSAYDNLNKVRVAIKKISPFEHQTYCQRTL-R 75
Query: 339 EVFIMRKVRHKNVVQFIGACTKPPSL------CIVTEFMSGGSVYDYLHKLKGVFKLPS- 391
E+ I+ + RH+N++ I + P++ IV + M L+KL L +
Sbjct: 76 EIKILLRFRHENIIG-INDIIRAPTIEQMKDVYIVQDLMETD-----LYKLLKTQHLSND 129
Query: 392 -LLKVAIDVSKGMNYLHQNNIIHRDLKAANLLMDENEVVKVADFGVARVK----AQSGVM 446
+ + +G+ Y+H N++HRDLK +NLL++ +K+ DFG+ARV +G +
Sbjct: 130 HICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFL 189
Query: 447 TAETGTYRWMAPEV-IEHKPYDHKADVFSFGIVLWELLTGKLPY---EYLTPLQAAVGVV 502
T T + APE+ + K Y D++S G +L E+L+ + + YL L +G++
Sbjct: 190 TEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGIL 249
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 65/240 (27%), Positives = 116/240 (48%), Gaps = 36/240 (15%)
Query: 286 VWEIDPKHLKFGSKVASGSYGDLYRGTYCSQ-------DVAIKVLKPERINSDMQKEFAQ 338
V+++ P++ S + G+YG CS VAIK + P + Q+ +
Sbjct: 24 VFDVGPRYTNL-SYIGEGAYG-----MVCSAYDNLNKVRVAIKKISPFEHQTYCQRTL-R 76
Query: 339 EVFIMRKVRHKNVVQFIGACTKPPSL------CIVTEFMSGGSVYDYLHKLKGVFKLPS- 391
E+ I+ + RH+N++ I + P++ IV + M L+KL L +
Sbjct: 77 EIKILLRFRHENIIG-INDIIRAPTIEQMKDVYIVQDLMETD-----LYKLLKTQHLSND 130
Query: 392 -LLKVAIDVSKGMNYLHQNNIIHRDLKAANLLMDENEVVKVADFGVARVK----AQSGVM 446
+ + +G+ Y+H N++HRDLK +NLL++ +K+ DFG+ARV +G +
Sbjct: 131 HICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFL 190
Query: 447 TAETGTYRWMAPEV-IEHKPYDHKADVFSFGIVLWELLTGKLPY---EYLTPLQAAVGVV 502
T T + APE+ + K Y D++S G +L E+L+ + + YL L +G++
Sbjct: 191 TEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGIL 250
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 65/240 (27%), Positives = 116/240 (48%), Gaps = 36/240 (15%)
Query: 286 VWEIDPKHLKFGSKVASGSYGDLYRGTYCSQ-------DVAIKVLKPERINSDMQKEFAQ 338
V+++ P++ S + G+YG CS VAIK + P + Q+ +
Sbjct: 15 VFDVGPRYTNL-SYIGEGAYG-----MVCSAYDNLNKVRVAIKKISPFEHQTYCQRTL-R 67
Query: 339 EVFIMRKVRHKNVVQFIGACTKPPSL------CIVTEFMSGGSVYDYLHKLKGVFKLPS- 391
E+ I+ + RH+N++ I + P++ IV + M L+KL L +
Sbjct: 68 EIKILLRFRHENIIG-INDIIRAPTIEQMKDVYIVQDLMETD-----LYKLLKTQHLSND 121
Query: 392 -LLKVAIDVSKGMNYLHQNNIIHRDLKAANLLMDENEVVKVADFGVARVK----AQSGVM 446
+ + +G+ Y+H N++HRDLK +NLL++ +K+ DFG+ARV +G +
Sbjct: 122 HICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFL 181
Query: 447 TAETGTYRWMAPEV-IEHKPYDHKADVFSFGIVLWELLTGKLPY---EYLTPLQAAVGVV 502
T T + APE+ + K Y D++S G +L E+L+ + + YL L +G++
Sbjct: 182 TEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGIL 241
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 65/240 (27%), Positives = 116/240 (48%), Gaps = 36/240 (15%)
Query: 286 VWEIDPKHLKFGSKVASGSYGDLYRGTYCSQ-------DVAIKVLKPERINSDMQKEFAQ 338
V+++ P++ S + G+YG CS VAIK + P + Q+ +
Sbjct: 22 VFDVGPRYTNL-SYIGEGAYG-----MVCSAYDNLNKVRVAIKKISPFEHQTYCQRTL-R 74
Query: 339 EVFIMRKVRHKNVVQFIGACTKPPSL------CIVTEFMSGGSVYDYLHKLKGVFKLPS- 391
E+ I+ + RH+N++ I + P++ IV + M L+KL L +
Sbjct: 75 EIKILLRFRHENIIG-INDIIRAPTIEQMKDVYIVQDLMETD-----LYKLLKCQHLSND 128
Query: 392 -LLKVAIDVSKGMNYLHQNNIIHRDLKAANLLMDENEVVKVADFGVARVK----AQSGVM 446
+ + +G+ Y+H N++HRDLK +NLL++ +K+ DFG+ARV +G +
Sbjct: 129 HICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFL 188
Query: 447 TAETGTYRWMAPEV-IEHKPYDHKADVFSFGIVLWELLTGKLPY---EYLTPLQAAVGVV 502
T T + APE+ + K Y D++S G +L E+L+ + + YL L +G++
Sbjct: 189 TEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGIL 248
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 65/240 (27%), Positives = 116/240 (48%), Gaps = 36/240 (15%)
Query: 286 VWEIDPKHLKFGSKVASGSYGDLYRGTYCSQ-------DVAIKVLKPERINSDMQKEFAQ 338
V+++ P++ S + G+YG CS VAIK + P + Q+ +
Sbjct: 22 VFDVGPRYTNL-SYIGEGAYG-----MVCSAYDNLNKVRVAIKKISPFEHQTYCQRTL-R 74
Query: 339 EVFIMRKVRHKNVVQFIGACTKPPSL------CIVTEFMSGGSVYDYLHKLKGVFKLPS- 391
E+ I+ + RH+N++ I + P++ IV + M L+KL L +
Sbjct: 75 EIKILLRFRHENIIG-INDIIRAPTIEQMKDVYIVQDLMETD-----LYKLLKTQHLSND 128
Query: 392 -LLKVAIDVSKGMNYLHQNNIIHRDLKAANLLMDENEVVKVADFGVARVK----AQSGVM 446
+ + +G+ Y+H N++HRDLK +NLL++ +K+ DFG+ARV +G +
Sbjct: 129 HICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFL 188
Query: 447 TAETGTYRWMAPEV-IEHKPYDHKADVFSFGIVLWELLTGKLPY---EYLTPLQAAVGVV 502
T T + APE+ + K Y D++S G +L E+L+ + + YL L +G++
Sbjct: 189 TEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGIL 248
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 102/209 (48%), Gaps = 11/209 (5%)
Query: 294 LKFGSKVASGSYGD--LYRGTYCSQDVAIKVLKPERINSDMQKEF-AQEVFIMRKVRHKN 350
KFG + GS+ L R S++ AIK+L+ I + + + +E +M ++ H
Sbjct: 37 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 96
Query: 351 VVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNN 410
V+ L + G + Y+ K+ G F ++ + YLH
Sbjct: 97 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKI-GSFDETCTRFYTAEIVSALEYLHGKG 155
Query: 411 IIHRDLKAANLLMDENEVVKVADFGVARV---KAQSGVMTAETGTYRWMAPEVIEHKPYD 467
IIHRDLK N+L++E+ +++ DFG A+V +++ GT ++++PE++ K
Sbjct: 156 IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSAC 215
Query: 468 HKADVFSFGIVLWELLTGKLPY----EYL 492
+D+++ G ++++L+ G P+ EYL
Sbjct: 216 KSSDLWALGCIIYQLVAGLPPFRAGNEYL 244
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 102/209 (48%), Gaps = 11/209 (5%)
Query: 294 LKFGSKVASGSYGD--LYRGTYCSQDVAIKVLKPERINSDMQKEF-AQEVFIMRKVRHKN 350
KFG + GS+ L R S++ AIK+L+ I + + + +E +M ++ H
Sbjct: 34 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 93
Query: 351 VVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNN 410
V+ L + G + Y+ K+ G F ++ + YLH
Sbjct: 94 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKI-GSFDETCTRFYTAEIVSALEYLHGKG 152
Query: 411 IIHRDLKAANLLMDENEVVKVADFGVARV---KAQSGVMTAETGTYRWMAPEVIEHKPYD 467
IIHRDLK N+L++E+ +++ DFG A+V +++ GT ++++PE++ K
Sbjct: 153 IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSAC 212
Query: 468 HKADVFSFGIVLWELLTGKLPY----EYL 492
+D+++ G ++++L+ G P+ EYL
Sbjct: 213 KSSDLWALGCIIYQLVAGLPPFRAGNEYL 241
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 65/240 (27%), Positives = 116/240 (48%), Gaps = 36/240 (15%)
Query: 286 VWEIDPKHLKFGSKVASGSYGDLYRGTYCSQ-------DVAIKVLKPERINSDMQKEFAQ 338
V+++ P++ S + G+YG CS VAIK + P + Q+ +
Sbjct: 16 VFDVGPRYTNL-SYIGEGAYG-----MVCSAYDNLNKVRVAIKKISPFEHQTYCQRTL-R 68
Query: 339 EVFIMRKVRHKNVVQFIGACTKPPSL------CIVTEFMSGGSVYDYLHKLKGVFKLPS- 391
E+ I+ + RH+N++ I + P++ IV + M L+KL L +
Sbjct: 69 EIKILLRFRHENIIG-INDIIRAPTIEQMKDVYIVQDLMETD-----LYKLLKTQHLSND 122
Query: 392 -LLKVAIDVSKGMNYLHQNNIIHRDLKAANLLMDENEVVKVADFGVARVK----AQSGVM 446
+ + +G+ Y+H N++HRDLK +NLL++ +K+ DFG+ARV +G +
Sbjct: 123 HICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFL 182
Query: 447 TAETGTYRWMAPEV-IEHKPYDHKADVFSFGIVLWELLTGKLPY---EYLTPLQAAVGVV 502
T T + APE+ + K Y D++S G +L E+L+ + + YL L +G++
Sbjct: 183 TEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGIL 242
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 102/209 (48%), Gaps = 11/209 (5%)
Query: 294 LKFGSKVASGSYGD--LYRGTYCSQDVAIKVLKPERINSDMQKEF-AQEVFIMRKVRHKN 350
KFG + GS+ L R S++ AIK+L+ I + + + +E +M ++ H
Sbjct: 32 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 91
Query: 351 VVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNN 410
V+ L + G + Y+ K+ G F ++ + YLH
Sbjct: 92 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKI-GSFDETCTRFYTAEIVSALEYLHGKG 150
Query: 411 IIHRDLKAANLLMDENEVVKVADFGVARV---KAQSGVMTAETGTYRWMAPEVIEHKPYD 467
IIHRDLK N+L++E+ +++ DFG A+V +++ GT ++++PE++ K
Sbjct: 151 IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSAC 210
Query: 468 HKADVFSFGIVLWELLTGKLPY----EYL 492
+D+++ G ++++L+ G P+ EYL
Sbjct: 211 KSSDLWALGCIIYQLVAGLPPFRAGNEYL 239
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 102/209 (48%), Gaps = 11/209 (5%)
Query: 294 LKFGSKVASGSYGD--LYRGTYCSQDVAIKVLKPERINSDMQKEF-AQEVFIMRKVRHKN 350
KFG + GS+ L R S++ AIK+L+ I + + + +E +M ++ H
Sbjct: 34 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 93
Query: 351 VVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNN 410
V+ L + G + Y+ K+ G F ++ + YLH
Sbjct: 94 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKI-GSFDETCTRFYTAEIVSALEYLHGKG 152
Query: 411 IIHRDLKAANLLMDENEVVKVADFGVARV---KAQSGVMTAETGTYRWMAPEVIEHKPYD 467
IIHRDLK N+L++E+ +++ DFG A+V +++ GT ++++PE++ K
Sbjct: 153 IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSAC 212
Query: 468 HKADVFSFGIVLWELLTGKLPY----EYL 492
+D+++ G ++++L+ G P+ EYL
Sbjct: 213 KSSDLWALGCIIYQLVAGLPPFRAGNEYL 241
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 54/166 (32%), Positives = 90/166 (54%), Gaps = 24/166 (14%)
Query: 338 QEVFIMRKVRHKNVVQFIGACTKPPS--LCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKV 395
QE+ I++K+ H NVV+ + P L +V E ++ G V ++P+L +
Sbjct: 85 QEIAILKKLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPV----------MEVPTLKPL 134
Query: 396 A--------IDVSKGMNYLHQNNIIHRDLKAANLLMDENEVVKVADFGVA-RVKAQSGVM 446
+ D+ KG+ YLH IIHRD+K +NLL+ E+ +K+ADFGV+ K ++
Sbjct: 135 SEDQARFYFQDLIKGIEYLHYQKIIHRDIKPSNLLVGEDGHIKIADFGVSNEFKGSDALL 194
Query: 447 TAETGTYRWMAPEVIE--HKPYDHKA-DVFSFGIVLWELLTGKLPY 489
+ GT +MAPE + K + KA DV++ G+ L+ + G+ P+
Sbjct: 195 SNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCPF 240
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 63/234 (26%), Positives = 113/234 (48%), Gaps = 28/234 (11%)
Query: 286 VWEIDPKHLKFGSKVASGSYGDLYRG--TYCSQDVAIKVLKPERINSDMQKEFAQEVFIM 343
VWE+ P+ L+ V SG+YG + Q VA+K L + + +E+ ++
Sbjct: 23 VWEV-PQRLQGLRPVGSGAYGSVCSAYDARLRQKVAVKKLSRPFQSLIHARRTYRELRLL 81
Query: 344 RKVRHKNVVQFIGACTKPPSL------CIVTEFMSGGSVYDYLHKLKGVFKLPSLLK--- 394
+ ++H+NV+ + T S+ +VT M L + K +L
Sbjct: 82 KHLKHENVIGLLDVFTPATSIEDFSEVYLVTTLMGA--------DLNNIVKCQALSDEHV 133
Query: 395 --VAIDVSKGMNYLHQNNIIHRDLKAANLLMDENEVVKVADFGVARVKAQSGVMTAETGT 452
+ + +G+ Y+H IIHRDLK +N+ ++E+ +++ DFG+AR + MT T
Sbjct: 134 QFLVYQLLRGLKYIHSAGIIHRDLKPSNVAVNEDSELRILDFGLARQADEE--MTGYVAT 191
Query: 453 YRWMAPEV-IEHKPYDHKADVFSFGIVLWELLTGKLPY---EYLTPLQAAVGVV 502
+ APE+ + Y+ D++S G ++ ELL GK + +Y+ L+ + VV
Sbjct: 192 RWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGKALFPGSDYIDQLKRIMEVV 245
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 65/240 (27%), Positives = 116/240 (48%), Gaps = 36/240 (15%)
Query: 286 VWEIDPKHLKFGSKVASGSYGDLYRGTYCSQ-------DVAIKVLKPERINSDMQKEFAQ 338
V+++ P++ S + G+YG CS VAIK + P + Q+ +
Sbjct: 26 VFDVGPRYTNL-SYIGEGAYG-----MVCSAYDNVNKVRVAIKKISPFEHQTYCQRTL-R 78
Query: 339 EVFIMRKVRHKNVVQFIGACTKPPSL------CIVTEFMSGGSVYDYLHKLKGVFKLPS- 391
E+ I+ + RH+N++ I + P++ IV + M L+KL L +
Sbjct: 79 EIKILLRFRHENIIG-INDIIRAPTIEQMKDVYIVQDLMETD-----LYKLLKTQHLSND 132
Query: 392 -LLKVAIDVSKGMNYLHQNNIIHRDLKAANLLMDENEVVKVADFGVARVK----AQSGVM 446
+ + +G+ Y+H N++HRDLK +NLL++ +K+ DFG+ARV +G +
Sbjct: 133 HICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFL 192
Query: 447 TAETGTYRWMAPEV-IEHKPYDHKADVFSFGIVLWELLTGKLPY---EYLTPLQAAVGVV 502
T T + APE+ + K Y D++S G +L E+L+ + + YL L +G++
Sbjct: 193 TEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGIL 252
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 65/240 (27%), Positives = 116/240 (48%), Gaps = 36/240 (15%)
Query: 286 VWEIDPKHLKFGSKVASGSYGDLYRGTYCSQ-------DVAIKVLKPERINSDMQKEFAQ 338
V+++ P++ S + G+YG CS VAIK + P + Q+ +
Sbjct: 18 VFDVGPRYTNL-SYIGEGAYG-----MVCSAYDNVNKVRVAIKKISPFEHQTYCQRTL-R 70
Query: 339 EVFIMRKVRHKNVVQFIGACTKPPSL------CIVTEFMSGGSVYDYLHKLKGVFKLPS- 391
E+ I+ + RH+N++ I + P++ IV + M L+KL L +
Sbjct: 71 EIKILLRFRHENIIG-INDIIRAPTIEQMKDVYIVQDLMETD-----LYKLLKTQHLSND 124
Query: 392 -LLKVAIDVSKGMNYLHQNNIIHRDLKAANLLMDENEVVKVADFGVARVK----AQSGVM 446
+ + +G+ Y+H N++HRDLK +NLL++ +K+ DFG+ARV +G +
Sbjct: 125 HICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFL 184
Query: 447 TAETGTYRWMAPEV-IEHKPYDHKADVFSFGIVLWELLTGKLPY---EYLTPLQAAVGVV 502
T T + APE+ + K Y D++S G +L E+L+ + + YL L +G++
Sbjct: 185 TEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGIL 244
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 65/240 (27%), Positives = 116/240 (48%), Gaps = 36/240 (15%)
Query: 286 VWEIDPKHLKFGSKVASGSYGDLYRGTYCSQ-------DVAIKVLKPERINSDMQKEFAQ 338
V+++ P++ S + G+YG CS VAIK + P + Q+ +
Sbjct: 20 VFDVGPRYTNL-SYIGEGAYG-----MVCSAYDNVNKVRVAIKKISPFEHQTYCQRTL-R 72
Query: 339 EVFIMRKVRHKNVVQFIGACTKPPSL------CIVTEFMSGGSVYDYLHKLKGVFKLPS- 391
E+ I+ + RH+N++ I + P++ IV + M L+KL L +
Sbjct: 73 EIKILLRFRHENIIG-INDIIRAPTIEQMKDVYIVQDLMETD-----LYKLLKTQHLSND 126
Query: 392 -LLKVAIDVSKGMNYLHQNNIIHRDLKAANLLMDENEVVKVADFGVARVK----AQSGVM 446
+ + +G+ Y+H N++HRDLK +NLL++ +K+ DFG+ARV +G +
Sbjct: 127 HICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFL 186
Query: 447 TAETGTYRWMAPEV-IEHKPYDHKADVFSFGIVLWELLTGKLPY---EYLTPLQAAVGVV 502
T T + APE+ + K Y D++S G +L E+L+ + + YL L +G++
Sbjct: 187 TEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGIL 246
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 65/240 (27%), Positives = 116/240 (48%), Gaps = 36/240 (15%)
Query: 286 VWEIDPKHLKFGSKVASGSYGDLYRGTYCSQ-------DVAIKVLKPERINSDMQKEFAQ 338
V+++ P++ S + G+YG CS VAIK + P + Q+ +
Sbjct: 38 VFDVGPRYTNL-SYIGEGAYG-----MVCSAYDNVNKVRVAIKKISPFEHQTYCQRTL-R 90
Query: 339 EVFIMRKVRHKNVVQFIGACTKPPSL------CIVTEFMSGGSVYDYLHKLKGVFKLPS- 391
E+ I+ + RH+N++ I + P++ IV + M L+KL L +
Sbjct: 91 EIKILLRFRHENIIG-INDIIRAPTIEQMKDVYIVQDLMETD-----LYKLLKTQHLSND 144
Query: 392 -LLKVAIDVSKGMNYLHQNNIIHRDLKAANLLMDENEVVKVADFGVARVK----AQSGVM 446
+ + +G+ Y+H N++HRDLK +NLL++ +K+ DFG+ARV +G +
Sbjct: 145 HICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFL 204
Query: 447 TAETGTYRWMAPEV-IEHKPYDHKADVFSFGIVLWELLTGKLPY---EYLTPLQAAVGVV 502
T T + APE+ + K Y D++S G +L E+L+ + + YL L +G++
Sbjct: 205 TEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGIL 264
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 102/202 (50%), Gaps = 10/202 (4%)
Query: 296 FGSKVASGSYGDLYRGTYCSQDV--AIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQ 353
F K+ SG++GD++ S + IK + +R M+ + E+ +++ + H N+++
Sbjct: 26 FKRKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPME-QIEAEIEVLKSLDHPNIIK 84
Query: 354 FIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMN---YLHQNN 410
++ IV E GG + + + + K S VA + + MN Y H +
Sbjct: 85 IFEVFEDYHNMYIVMETCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFHSQH 144
Query: 411 IIHRDLKAANLLMDENEV---VKVADFGVARVKAQSGVMTAETGTYRWMAPEVIEHKPYD 467
++H+DLK N+L + +K+ DFG+A + T GT +MAPEV + +
Sbjct: 145 VVHKDLKPENILFQDTSPHSPIKIIDFGLAELFKSDEHSTNAAGTALYMAPEVFK-RDVT 203
Query: 468 HKADVFSFGIVLWELLTGKLPY 489
K D++S G+V++ LLTG LP+
Sbjct: 204 FKCDIWSAGVVMYFLLTGCLPF 225
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 102/209 (48%), Gaps = 11/209 (5%)
Query: 294 LKFGSKVASGSYGD--LYRGTYCSQDVAIKVLKPERINSDMQKEF-AQEVFIMRKVRHKN 350
KFG + GS+ L R S++ AIK+L+ I + + + +E +M ++ H
Sbjct: 34 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 93
Query: 351 VVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNN 410
V+ L + G + Y+ K+ G F ++ + YLH
Sbjct: 94 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKI-GSFDETCTRFYTAEIVSALEYLHGKG 152
Query: 411 IIHRDLKAANLLMDENEVVKVADFGVARV---KAQSGVMTAETGTYRWMAPEVIEHKPYD 467
IIHRDLK N+L++E+ +++ DFG A+V +++ GT ++++PE++ K
Sbjct: 153 IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSAC 212
Query: 468 HKADVFSFGIVLWELLTGKLPY----EYL 492
+D+++ G ++++L+ G P+ EYL
Sbjct: 213 KSSDLWALGCIIYQLVAGLPPFRAGNEYL 241
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 102/209 (48%), Gaps = 11/209 (5%)
Query: 294 LKFGSKVASGSYGD--LYRGTYCSQDVAIKVLKPERINSDMQKEF-AQEVFIMRKVRHKN 350
KFG + GS+ L R S++ AIK+L+ I + + + +E +M ++ H
Sbjct: 35 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 94
Query: 351 VVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNN 410
V+ L + G + Y+ K+ G F ++ + YLH
Sbjct: 95 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKI-GSFDETCTRFYTAEIVSALEYLHGKG 153
Query: 411 IIHRDLKAANLLMDENEVVKVADFGVARV---KAQSGVMTAETGTYRWMAPEVIEHKPYD 467
IIHRDLK N+L++E+ +++ DFG A+V +++ GT ++++PE++ K
Sbjct: 154 IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSAC 213
Query: 468 HKADVFSFGIVLWELLTGKLPY----EYL 492
+D+++ G ++++L+ G P+ EYL
Sbjct: 214 KSSDLWALGCIIYQLVAGLPPFRAGNEYL 242
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 65/240 (27%), Positives = 115/240 (47%), Gaps = 36/240 (15%)
Query: 286 VWEIDPKHLKFGSKVASGSYGDLYRGTYCSQ-------DVAIKVLKPERINSDMQKEFAQ 338
V+++ P++ S + G+YG CS VAIK + P + Q+ +
Sbjct: 20 VFDVGPRYTNL-SYIGEGAYG-----MVCSAYDNVNKVRVAIKKISPFEHQTYCQRTL-R 72
Query: 339 EVFIMRKVRHKNVVQFIGACTKPPSL------CIVTEFMSGGSVYDYLHKLKGVFKLPS- 391
E+ I+ RH+N++ I + P++ IV + M L+KL L +
Sbjct: 73 EIKILLAFRHENIIG-INDIIRAPTIEQMKDVYIVQDLMETD-----LYKLLKTQHLSND 126
Query: 392 -LLKVAIDVSKGMNYLHQNNIIHRDLKAANLLMDENEVVKVADFGVARVK----AQSGVM 446
+ + +G+ Y+H N++HRDLK +NLL++ +K+ DFG+ARV +G +
Sbjct: 127 HICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTSDLKICDFGLARVADPDHDHTGFL 186
Query: 447 TAETGTYRWMAPEV-IEHKPYDHKADVFSFGIVLWELLTGKLPY---EYLTPLQAAVGVV 502
T T + APE+ + K Y D++S G +L E+L+ + + YL L +G++
Sbjct: 187 TEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGIL 246
>pdb|4EUT|A Chain A, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
pdb|4EUT|B Chain B, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
Length = 396
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 62/214 (28%), Positives = 100/214 (46%), Gaps = 31/214 (14%)
Query: 300 VASGSYGDLYRGTY--CSQDVAIKV------LKPERINSDMQKEFAQEVFIMRKVRHKNV 351
+ G+ +++RG + AIKV L+P D+Q +E +++K+ HKN+
Sbjct: 17 LGQGATANVFRGRHKKTGDLFAIKVFNNISFLRP----VDVQ---MREFEVLKKLNHKNI 69
Query: 352 VQF--IGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPS--LLKVAIDVSKGMNYLH 407
V+ I T ++ EF GS+Y L + + LP L V DV GMN+L
Sbjct: 70 VKLFAIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLR 129
Query: 408 QNNIIHRDLKAANLLM----DENEVVKVADFGVARVKAQSGVMTAETGTYRWMAPEVIE- 462
+N I+HR++K N++ D V K+ DFG AR + GT ++ P++ E
Sbjct: 130 ENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQFVSLYGTEEYLHPDMYER 189
Query: 463 -------HKPYDHKADVFSFGIVLWELLTGKLPY 489
K Y D++S G+ + TG LP+
Sbjct: 190 AVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPF 223
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 103/215 (47%), Gaps = 25/215 (11%)
Query: 286 VWEIDPKHLKFGSKVASGSYGDLYRG--TYCSQDVAIKVLKPERINSDMQKEFAQEVFIM 343
+WE+ P+ + S V SG+YG + T VA+K L + K +E+ ++
Sbjct: 37 IWEV-PERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLL 95
Query: 344 RKVRHKNVVQFIGACTKPPSL------CIVTEFMSGGSVYDYLHKLKGVFKLPSLLK--- 394
+ ++H+NV+ + T SL +VT M L + K L
Sbjct: 96 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGA--------DLNNIVKCQKLTDDHV 147
Query: 395 --VAIDVSKGMNYLHQNNIIHRDLKAANLLMDENEVVKVADFGVARVKAQSGVMTAETGT 452
+ + +G+ Y+H +IIHRDLK +NL ++E+ +K+ DFG+AR M T
Sbjct: 148 QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMXGXVAT 205
Query: 453 YRWMAPEV-IEHKPYDHKADVFSFGIVLWELLTGK 486
+ APE+ + Y+ D++S G ++ ELLTG+
Sbjct: 206 RWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 240
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 99/202 (49%), Gaps = 7/202 (3%)
Query: 294 LKFGSKVASGSYGD--LYRGTYCSQDVAIKVLKPERINSDMQKEF-AQEVFIMRKVRHKN 350
KFG + GS+ L R S++ AIK+L+ I + + + +E +M ++ H
Sbjct: 34 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 93
Query: 351 VVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNN 410
V+ L + G + Y+ K+ G F ++ + YLH
Sbjct: 94 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKI-GSFDETCTRFYTAEIVSALEYLHGKG 152
Query: 411 IIHRDLKAANLLMDENEVVKVADFGVARV---KAQSGVMTAETGTYRWMAPEVIEHKPYD 467
IIHRDLK N+L++E+ +++ DFG A+V +++ GT ++++PE++ K
Sbjct: 153 IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSAC 212
Query: 468 HKADVFSFGIVLWELLTGKLPY 489
+D+++ G ++++L+ G P+
Sbjct: 213 KSSDLWALGCIIYQLVAGLPPF 234
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 103/215 (47%), Gaps = 25/215 (11%)
Query: 286 VWEIDPKHLKFGSKVASGSYGDLYRG--TYCSQDVAIKVLKPERINSDMQKEFAQEVFIM 343
+WE+ P+ + S V SG+YG + T VA+K L + K +E+ ++
Sbjct: 17 IWEV-PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL 75
Query: 344 RKVRHKNVVQFIGACTKPPSL------CIVTEFMSGGSVYDYLHKLKGVFKLPSLLK--- 394
+ ++H+NV+ + T SL +VT M L + K L
Sbjct: 76 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGA--------DLNNIVKSQKLTDDHV 127
Query: 395 --VAIDVSKGMNYLHQNNIIHRDLKAANLLMDENEVVKVADFGVARVKAQSGVMTAETGT 452
+ + +G+ Y+H +IIHRDLK +NL ++E+ +K+ DFG+ R MT T
Sbjct: 128 QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDSELKILDFGLCR--HTDDEMTGYVAT 185
Query: 453 YRWMAPEV-IEHKPYDHKADVFSFGIVLWELLTGK 486
+ APE+ + Y+ D++S G ++ ELLTG+
Sbjct: 186 RWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 102/209 (48%), Gaps = 11/209 (5%)
Query: 294 LKFGSKVASGSYGD--LYRGTYCSQDVAIKVLKPERINSDMQKEF-AQEVFIMRKVRHKN 350
KFG + GS+ L R S++ AIK+L+ I + + + +E +M ++ H
Sbjct: 16 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 75
Query: 351 VVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNN 410
V+ L + G + Y+ K+ G F ++ + YLH
Sbjct: 76 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKI-GSFDETCTRFYTAEIVSALEYLHGKG 134
Query: 411 IIHRDLKAANLLMDENEVVKVADFGVARV---KAQSGVMTAETGTYRWMAPEVIEHKPYD 467
IIHRDLK N+L++E+ +++ DFG A+V +++ GT ++++PE++ K
Sbjct: 135 IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSAC 194
Query: 468 HKADVFSFGIVLWELLTGKLPY----EYL 492
+D+++ G ++++L+ G P+ EYL
Sbjct: 195 KSSDLWALGCIIYQLVAGLPPFRAGNEYL 223
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 105/206 (50%), Gaps = 23/206 (11%)
Query: 298 SKVASGSYGDLYRGTY--CSQDVAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQFI 355
+K+ G++G++++ + Q VA+K + E +E+ I++ ++H+NVV I
Sbjct: 24 AKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLI 83
Query: 356 GAC---TKPPSLCIVTEFMSGGSVYDYL-HKLKGV-------FKLPSLLKVAIDVSKGMN 404
C P + C + ++ V+D+ H L G+ F L + +V + G+
Sbjct: 84 EICRTKASPYNRCKASIYL----VFDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLLNGLY 139
Query: 405 YLHQNNIIHRDLKAANLLMDENEVVKVADFGVARV-----KAQSGVMTAETGTYRWMAPE 459
Y+H+N I+HRD+KAAN+L+ + V+K+ADFG+AR +Q T + PE
Sbjct: 140 YIHRNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLWYRPPE 199
Query: 460 -VIEHKPYDHKADVFSFGIVLWELLT 484
++ + Y D++ G ++ E+ T
Sbjct: 200 LLLGERDYGPPIDLWGAGCIMAEMWT 225
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 102/209 (48%), Gaps = 11/209 (5%)
Query: 294 LKFGSKVASGSYGD--LYRGTYCSQDVAIKVLKPERINSDMQKEF-AQEVFIMRKVRHKN 350
KFG + GS+ L R S++ AIK+L+ I + + + +E +M ++ H
Sbjct: 31 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 90
Query: 351 VVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNN 410
V+ L + G + Y+ K+ G F ++ + YLH
Sbjct: 91 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKI-GSFDETCTRFYTAEIVSALEYLHGKG 149
Query: 411 IIHRDLKAANLLMDENEVVKVADFGVARV---KAQSGVMTAETGTYRWMAPEVIEHKPYD 467
IIHRDLK N+L++E+ +++ DFG A+V +++ GT ++++PE++ K
Sbjct: 150 IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSAC 209
Query: 468 HKADVFSFGIVLWELLTGKLPY----EYL 492
+D+++ G ++++L+ G P+ EYL
Sbjct: 210 KSSDLWALGCIIYQLVAGLPPFRAGNEYL 238
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 104/215 (48%), Gaps = 25/215 (11%)
Query: 286 VWEIDPKHLKFGSKVASGSYGDLYRG--TYCSQDVAIKVLKPERINSDMQKEFAQEVFIM 343
+WE+ P+ + S V SG+YG + T VA+K L + K +E+ ++
Sbjct: 17 IWEV-PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL 75
Query: 344 RKVRHKNVVQFIGACTKPPSL------CIVTEFMSGGSVYDYLHKLKGVFKLPSLLK--- 394
+ ++H+NV+ + T SL +VT M L + K L
Sbjct: 76 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGA--------DLNNIVKCQKLTDDHV 127
Query: 395 --VAIDVSKGMNYLHQNNIIHRDLKAANLLMDENEVVKVADFGVARVKAQSGVMTAETGT 452
+ + +G+ Y+H +IIHRDLK +NL ++E+ +K+ D+G+AR MT T
Sbjct: 128 QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDYGLAR--HTDDEMTGYVAT 185
Query: 453 YRWMAPEV-IEHKPYDHKADVFSFGIVLWELLTGK 486
+ APE+ + Y+ D++S G ++ ELLTG+
Sbjct: 186 RWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 63/234 (26%), Positives = 113/234 (48%), Gaps = 28/234 (11%)
Query: 286 VWEIDPKHLKFGSKVASGSYGDLYRG--TYCSQDVAIKVLKPERINSDMQKEFAQEVFIM 343
VWE+ P+ L+ V SG+YG + Q VA+K L + + +E+ ++
Sbjct: 23 VWEV-PQRLQGLRPVGSGAYGSVCSAYDARLRQKVAVKKLSRPFQSLIHARRTYRELRLL 81
Query: 344 RKVRHKNVVQFIGACTKPPSL------CIVTEFMSGGSVYDYLHKLKGVFKLPSLLK--- 394
+ ++H+NV+ + T S+ +VT M L + K +L
Sbjct: 82 KHLKHENVIGLLDVFTPATSIEDFSEVYLVTTLMGA--------DLNNIVKSQALSDEHV 133
Query: 395 --VAIDVSKGMNYLHQNNIIHRDLKAANLLMDENEVVKVADFGVARVKAQSGVMTAETGT 452
+ + +G+ Y+H IIHRDLK +N+ ++E+ +++ DFG+AR + MT T
Sbjct: 134 QFLVYQLLRGLKYIHSAGIIHRDLKPSNVAVNEDSELRILDFGLARQADEE--MTGYVAT 191
Query: 453 YRWMAPEV-IEHKPYDHKADVFSFGIVLWELLTGKLPY---EYLTPLQAAVGVV 502
+ APE+ + Y+ D++S G ++ ELL GK + +Y+ L+ + VV
Sbjct: 192 RWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGKALFPGSDYIDQLKRIMEVV 245
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 103/215 (47%), Gaps = 25/215 (11%)
Query: 286 VWEIDPKHLKFGSKVASGSYGDLYRG--TYCSQDVAIKVLKPERINSDMQKEFAQEVFIM 343
+WE+ P+ + S V SG+YG + T VA+K L + K +E+ ++
Sbjct: 17 IWEV-PERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLL 75
Query: 344 RKVRHKNVVQFIGACTKPPSL------CIVTEFMSGGSVYDYLHKLKGVFKLPSLLK--- 394
+ ++H+NV+ + T SL +VT M L + K L
Sbjct: 76 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGA--------DLNNIVKCQKLTDDHV 127
Query: 395 --VAIDVSKGMNYLHQNNIIHRDLKAANLLMDENEVVKVADFGVARVKAQSGVMTAETGT 452
+ + +G+ Y+H +IIHRDLK +NL ++E+ +K+ DFG+AR T
Sbjct: 128 QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMAGFVATRW 187
Query: 453 YRWMAPEV-IEHKPYDHKADVFSFGIVLWELLTGK 486
YR APE+ + Y+ D++S G ++ ELLTG+
Sbjct: 188 YR--APEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 103/215 (47%), Gaps = 25/215 (11%)
Query: 286 VWEIDPKHLKFGSKVASGSYGDLYRG--TYCSQDVAIKVLKPERINSDMQKEFAQEVFIM 343
+WE+ P+ + S V SG+YG + T VA+K L + K +E+ ++
Sbjct: 17 IWEV-PERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLL 75
Query: 344 RKVRHKNVVQFIGACTKPPSL------CIVTEFMSGGSVYDYLHKLKGVFKLPSLLK--- 394
+ ++H+NV+ + T SL +VT M L + K L
Sbjct: 76 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGA--------DLNNIVKCQKLTDDHV 127
Query: 395 --VAIDVSKGMNYLHQNNIIHRDLKAANLLMDENEVVKVADFGVARVKAQSGVMTAETGT 452
+ + +G+ Y+H +IIHRDLK +NL ++E+ +K+ DFG+AR T
Sbjct: 128 QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMAGFVATRW 187
Query: 453 YRWMAPEV-IEHKPYDHKADVFSFGIVLWELLTGK 486
YR APE+ + Y+ D++S G ++ ELLTG+
Sbjct: 188 YR--APEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 51/164 (31%), Positives = 90/164 (54%), Gaps = 7/164 (4%)
Query: 328 INSDMQKEFAQEVFIMRKVRHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVF 387
I ++ + +E+ ++ + +V F GA + I E M GGS+ L + K
Sbjct: 53 IKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKEAK--- 109
Query: 388 KLPS--LLKVAIDVSKGMNYLHQ-NNIIHRDLKAANLLMDENEVVKVADFGVARVKAQSG 444
++P L KV+I V +G+ YL + + I+HRD+K +N+L++ +K+ DFGV+ S
Sbjct: 110 RIPEEILGKVSIAVLRGLAYLREKHQIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS- 168
Query: 445 VMTAETGTYRWMAPEVIEHKPYDHKADVFSFGIVLWELLTGKLP 488
+ + GT +MAPE ++ Y ++D++S G+ L EL G+ P
Sbjct: 169 MANSFVGTRSYMAPERLQGTHYSVQSDIWSMGLSLVELAVGRYP 212
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 64/240 (26%), Positives = 116/240 (48%), Gaps = 36/240 (15%)
Query: 286 VWEIDPKHLKFGSKVASGSYGDLYRGTYCSQ-------DVAIKVLKPERINSDMQKEFAQ 338
V+++ P++ S + G+YG CS VAI+ + P + Q+ +
Sbjct: 22 VFDVGPRYTNL-SYIGEGAYG-----MVCSAYDNLNKVRVAIRKISPFEHQTYCQRTL-R 74
Query: 339 EVFIMRKVRHKNVVQFIGACTKPPSL------CIVTEFMSGGSVYDYLHKLKGVFKLPS- 391
E+ I+ + RH+N++ I + P++ IV + M L+KL L +
Sbjct: 75 EIKILLRFRHENIIG-INDIIRAPTIEQMKDVYIVQDLMETD-----LYKLLKTQHLSND 128
Query: 392 -LLKVAIDVSKGMNYLHQNNIIHRDLKAANLLMDENEVVKVADFGVARVK----AQSGVM 446
+ + +G+ Y+H N++HRDLK +NLL++ +K+ DFG+ARV +G +
Sbjct: 129 HICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFL 188
Query: 447 TAETGTYRWMAPEV-IEHKPYDHKADVFSFGIVLWELLTGKLPY---EYLTPLQAAVGVV 502
T T + APE+ + K Y D++S G +L E+L+ + + YL L +G++
Sbjct: 189 TEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGIL 248
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 99/202 (49%), Gaps = 8/202 (3%)
Query: 293 HLKFGSKVASGSYGDLYRGT--YCSQDVAIK-VLKPERINSDMQKEFAQEVFIMRKVRHK 349
H ++ +G++G ++R T + A K V+ P + + + +E+ M +RH
Sbjct: 52 HYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVR---KEIQTMSVLRHP 108
Query: 350 NVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQN 409
+V A + ++ EFMSGG +++ + ++ V KG+ ++H+N
Sbjct: 109 TLVNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMHEN 168
Query: 410 NIIHRDLKAANLLM--DENEVVKVADFGVARVKAQSGVMTAETGTYRWMAPEVIEHKPYD 467
N +H DLK N++ + +K+ DFG+ + TGT + APEV E KP
Sbjct: 169 NYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKVTTGTAEFAAPEVAEGKPVG 228
Query: 468 HKADVFSFGIVLWELLTGKLPY 489
+ D++S G++ + LL+G P+
Sbjct: 229 YYTDMWSVGVLSYILLSGLSPF 250
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 105/206 (50%), Gaps = 23/206 (11%)
Query: 298 SKVASGSYGDLYRGTY--CSQDVAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQFI 355
+K+ G++G++++ + Q VA+K + E +E+ I++ ++H+NVV I
Sbjct: 24 AKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLI 83
Query: 356 GAC---TKPPSLCIVTEFMSGGSVYDYL-HKLKGV-------FKLPSLLKVAIDVSKGMN 404
C P + C + ++ V+D+ H L G+ F L + +V + G+
Sbjct: 84 EICRTKASPYNRCKGSIYL----VFDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLLNGLY 139
Query: 405 YLHQNNIIHRDLKAANLLMDENEVVKVADFGVARV-----KAQSGVMTAETGTYRWMAPE 459
Y+H+N I+HRD+KAAN+L+ + V+K+ADFG+AR +Q T + PE
Sbjct: 140 YIHRNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLWYRPPE 199
Query: 460 -VIEHKPYDHKADVFSFGIVLWELLT 484
++ + Y D++ G ++ E+ T
Sbjct: 200 LLLGERDYGPPIDLWGAGCIMAEMWT 225
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 93/204 (45%), Gaps = 32/204 (15%)
Query: 300 VASGSYGDLYRG--TYCSQDVAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQFIGA 357
+ SG+ G + ++VAIK L N K +E+ +M+ V HKN++ +
Sbjct: 32 IGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKVVNHKNIIGLLNV 91
Query: 358 CTKPPSL------CIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSK---------- 401
T SL IV E M L ++++ +D +
Sbjct: 92 FTPQKSLEEFQDVYIVMELMDAN--------------LSQVIQMELDHERMSYLLYQMLV 137
Query: 402 GMNYLHQNNIIHRDLKAANLLMDENEVVKVADFGVARVKAQSGVMTAETGTYRWMAPEVI 461
G+ +LH IIHRDLK +N+++ + +K+ DFG+AR S +MT T + APEVI
Sbjct: 138 GIKHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVI 197
Query: 462 EHKPYDHKADVFSFGIVLWELLTG 485
Y D++S G ++ E++ G
Sbjct: 198 LGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 103/215 (47%), Gaps = 25/215 (11%)
Query: 286 VWEIDPKHLKFGSKVASGSYGDLYRG--TYCSQDVAIKVLKPERINSDMQKEFAQEVFIM 343
+WE+ P+ + S V SG+YG + T VA+K L + K +E+ ++
Sbjct: 13 IWEV-PERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLL 71
Query: 344 RKVRHKNVVQFIGACTKPPSL------CIVTEFMSGGSVYDYLHKLKGVFKLPSLLK--- 394
+ ++H+NV+ + T SL +VT M L + K L
Sbjct: 72 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGA--------DLNNIVKCQKLTDDHV 123
Query: 395 --VAIDVSKGMNYLHQNNIIHRDLKAANLLMDENEVVKVADFGVARVKAQSGVMTAETGT 452
+ + +G+ Y+H +IIHRDLK +NL ++E+ +K+ DFG+AR T
Sbjct: 124 QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMAGFVATRW 183
Query: 453 YRWMAPEV-IEHKPYDHKADVFSFGIVLWELLTGK 486
YR APE+ + Y+ D++S G ++ ELLTG+
Sbjct: 184 YR--APEIMLNWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 56/193 (29%), Positives = 104/193 (53%), Gaps = 4/193 (2%)
Query: 298 SKVASGSYGDLYRGTY-CSQDVAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQFIG 356
S++ +G+ G +++ ++ S V + L I ++ + +E+ ++ + +V F G
Sbjct: 74 SELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYG 133
Query: 357 ACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNN-IIHRD 415
A + I E M GGS+ D + K G L KV+I V KG+ YL + + I+HRD
Sbjct: 134 AFYSDGEISICMEHMDGGSL-DQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRD 192
Query: 416 LKAANLLMDENEVVKVADFGVARVKAQSGVMTAETGTYRWMAPEVIEHKPYDHKADVFSF 475
+K +N+L++ +K+ DFGV+ S + + GT +M+PE ++ Y ++D++S
Sbjct: 193 VKPSNILVNSRGEIKLCDFGVSGQLIDS-MANSFVGTRSYMSPERLQGTHYSVQSDIWSM 251
Query: 476 GIVLWELLTGKLP 488
G+ L E+ G+ P
Sbjct: 252 GLSLVEMAVGRYP 264
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 93/204 (45%), Gaps = 32/204 (15%)
Query: 300 VASGSYGDLYRG--TYCSQDVAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQFIGA 357
+ SG+ G + ++VAIK L N K +E+ +M+ V HKN++ +
Sbjct: 32 IGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKVVNHKNIIGLLNV 91
Query: 358 CTKPPSL------CIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSK---------- 401
T SL IV E M L ++++ +D +
Sbjct: 92 FTPQKSLEEFQDVYIVMELMDAN--------------LSQVIQMELDHERMSYLLYQMLC 137
Query: 402 GMNYLHQNNIIHRDLKAANLLMDENEVVKVADFGVARVKAQSGVMTAETGTYRWMAPEVI 461
G+ +LH IIHRDLK +N+++ + +K+ DFG+AR S +MT T + APEVI
Sbjct: 138 GIKHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVI 197
Query: 462 EHKPYDHKADVFSFGIVLWELLTG 485
Y D++S G ++ E++ G
Sbjct: 198 LGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 93/204 (45%), Gaps = 32/204 (15%)
Query: 300 VASGSYGDLYRG--TYCSQDVAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQFIGA 357
+ SG+ G + ++VAIK L N K +E+ +M+ V HKN++ +
Sbjct: 32 IGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNV 91
Query: 358 CTKPPSL------CIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSK---------- 401
T SL IV E M L ++++ +D +
Sbjct: 92 FTPQKSLEEFQDVYIVMELMDAN--------------LSQVIQMELDHERMSYLLYQMLC 137
Query: 402 GMNYLHQNNIIHRDLKAANLLMDENEVVKVADFGVARVKAQSGVMTAETGTYRWMAPEVI 461
G+ +LH IIHRDLK +N+++ + +K+ DFG+AR S +MT T + APEVI
Sbjct: 138 GIKHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVI 197
Query: 462 EHKPYDHKADVFSFGIVLWELLTG 485
Y D++S G ++ E++ G
Sbjct: 198 LGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 63/234 (26%), Positives = 113/234 (48%), Gaps = 28/234 (11%)
Query: 286 VWEIDPKHLKFGSKVASGSYGDLYRG--TYCSQDVAIKVLKPERINSDMQKEFAQEVFIM 343
VWE+ P+ L+ V SG+YG + Q VA+K L + + +E+ ++
Sbjct: 15 VWEV-PQRLQGLRPVGSGAYGSVCSAYDARLRQKVAVKKLSRPFQSLIHARRTYRELRLL 73
Query: 344 RKVRHKNVVQFIGACTKPPSL------CIVTEFMSGGSVYDYLHKLKGVFKLPSLLK--- 394
+ ++H+NV+ + T S+ +VT M L + K +L
Sbjct: 74 KHLKHENVIGLLDVFTPATSIEDFSEVYLVTTLMGA--------DLNNIVKCQALSDEHV 125
Query: 395 --VAIDVSKGMNYLHQNNIIHRDLKAANLLMDENEVVKVADFGVARVKAQSGVMTAETGT 452
+ + +G+ Y+H IIHRDLK +N+ ++E+ +++ DFG+AR + MT T
Sbjct: 126 QFLVYQLLRGLKYIHSAGIIHRDLKPSNVAVNEDCELRILDFGLARQADEE--MTGYVAT 183
Query: 453 YRWMAPEV-IEHKPYDHKADVFSFGIVLWELLTGKLPY---EYLTPLQAAVGVV 502
+ APE+ + Y+ D++S G ++ ELL GK + +Y+ L+ + VV
Sbjct: 184 RWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGKALFPGSDYIDQLKRIMEVV 237
>pdb|4EUU|A Chain A, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
pdb|4EUU|B Chain B, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
Length = 319
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 62/214 (28%), Positives = 99/214 (46%), Gaps = 31/214 (14%)
Query: 300 VASGSYGDLYRGTY--CSQDVAIKV------LKPERINSDMQKEFAQEVFIMRKVRHKNV 351
+ G+ +++RG + AIKV L+P D+Q +E +++K+ HKN+
Sbjct: 17 LGQGATANVFRGRHKKTGDLFAIKVFNNISFLRP----VDVQ---MREFEVLKKLNHKNI 69
Query: 352 VQF--IGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPS--LLKVAIDVSKGMNYLH 407
V+ I T ++ EF GS+Y L + + LP L V DV GMN+L
Sbjct: 70 VKLFAIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLR 129
Query: 408 QNNIIHRDLKAANLLM----DENEVVKVADFGVARVKAQSGVMTAETGTYRWMAPEVIE- 462
+N I+HR++K N++ D V K+ DFG AR GT ++ P++ E
Sbjct: 130 ENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQFVXLYGTEEYLHPDMYER 189
Query: 463 -------HKPYDHKADVFSFGIVLWELLTGKLPY 489
K Y D++S G+ + TG LP+
Sbjct: 190 AVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPF 223
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 56/193 (29%), Positives = 104/193 (53%), Gaps = 4/193 (2%)
Query: 298 SKVASGSYGDLYRGTY-CSQDVAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQFIG 356
S++ +G+ G +++ ++ S V + L I ++ + +E+ ++ + +V F G
Sbjct: 12 SELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYG 71
Query: 357 ACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNN-IIHRD 415
A + I E M GGS+ D + K G L KV+I V KG+ YL + + I+HRD
Sbjct: 72 AFYSDGEISICMEHMDGGSL-DQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRD 130
Query: 416 LKAANLLMDENEVVKVADFGVARVKAQSGVMTAETGTYRWMAPEVIEHKPYDHKADVFSF 475
+K +N+L++ +K+ DFGV+ S + + GT +M+PE ++ Y ++D++S
Sbjct: 131 VKPSNILVNSRGEIKLCDFGVSGQLIDS-MANSFVGTRSYMSPERLQGTHYSVQSDIWSM 189
Query: 476 GIVLWELLTGKLP 488
G+ L E+ G+ P
Sbjct: 190 GLSLVEMAVGRYP 202
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 56/193 (29%), Positives = 104/193 (53%), Gaps = 4/193 (2%)
Query: 298 SKVASGSYGDLYRGTY-CSQDVAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQFIG 356
S++ +G+ G +++ ++ S V + L I ++ + +E+ ++ + +V F G
Sbjct: 12 SELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYG 71
Query: 357 ACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNN-IIHRD 415
A + I E M GGS+ D + K G L KV+I V KG+ YL + + I+HRD
Sbjct: 72 AFYSDGEISICMEHMDGGSL-DQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRD 130
Query: 416 LKAANLLMDENEVVKVADFGVARVKAQSGVMTAETGTYRWMAPEVIEHKPYDHKADVFSF 475
+K +N+L++ +K+ DFGV+ S + + GT +M+PE ++ Y ++D++S
Sbjct: 131 VKPSNILVNSRGEIKLCDFGVSGQLIDS-MANSFVGTRSYMSPERLQGTHYSVQSDIWSM 189
Query: 476 GIVLWELLTGKLP 488
G+ L E+ G+ P
Sbjct: 190 GLSLVEMAVGRYP 202
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 65/240 (27%), Positives = 115/240 (47%), Gaps = 36/240 (15%)
Query: 286 VWEIDPKHLKFGSKVASGSYGDLYRGTYCSQ-------DVAIKVLKPERINSDMQKEFAQ 338
V+++ P++ S + G+YG CS VAIK + P + Q+ +
Sbjct: 20 VFDVGPRYTNL-SYIGEGAYG-----MVCSAYDNVNKVRVAIKKISPFEHQTYCQRTL-R 72
Query: 339 EVFIMRKVRHKNVVQFIGACTKPPSL------CIVTEFMSGGSVYDYLHKLKGVFKLPS- 391
E+ I+ RH+N++ I + P++ IV + M L+KL L +
Sbjct: 73 EIKILLAFRHENIIG-INDIIRAPTIEQMKDVYIVQDLMETD-----LYKLLKTQHLSND 126
Query: 392 -LLKVAIDVSKGMNYLHQNNIIHRDLKAANLLMDENEVVKVADFGVARVK----AQSGVM 446
+ + +G+ Y+H N++HRDLK +NLL++ +K+ DFG+ARV +G +
Sbjct: 127 HICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFL 186
Query: 447 TAETGTYRWMAPEV-IEHKPYDHKADVFSFGIVLWELLTGKLPY---EYLTPLQAAVGVV 502
T T + APE+ + K Y D++S G +L E+L+ + + YL L +G++
Sbjct: 187 TEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGIL 246
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 99/202 (49%), Gaps = 8/202 (3%)
Query: 293 HLKFGSKVASGSYGDLYRGT--YCSQDVAIK-VLKPERINSDMQKEFAQEVFIMRKVRHK 349
H ++ +G++G ++R T + A K V+ P + + + +E+ M +RH
Sbjct: 158 HYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVR---KEIQTMSVLRHP 214
Query: 350 NVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQN 409
+V A + ++ EFMSGG +++ + ++ V KG+ ++H+N
Sbjct: 215 TLVNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMHEN 274
Query: 410 NIIHRDLKAANLLM--DENEVVKVADFGVARVKAQSGVMTAETGTYRWMAPEVIEHKPYD 467
N +H DLK N++ + +K+ DFG+ + TGT + APEV E KP
Sbjct: 275 NYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKVTTGTAEFAAPEVAEGKPVG 334
Query: 468 HKADVFSFGIVLWELLTGKLPY 489
+ D++S G++ + LL+G P+
Sbjct: 335 YYTDMWSVGVLSYILLSGLSPF 356
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 56/193 (29%), Positives = 104/193 (53%), Gaps = 4/193 (2%)
Query: 298 SKVASGSYGDLYRGTY-CSQDVAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQFIG 356
S++ +G+ G +++ ++ S V + L I ++ + +E+ ++ + +V F G
Sbjct: 12 SELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYG 71
Query: 357 ACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNN-IIHRD 415
A + I E M GGS+ D + K G L KV+I V KG+ YL + + I+HRD
Sbjct: 72 AFYSDGEISICMEHMDGGSL-DQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRD 130
Query: 416 LKAANLLMDENEVVKVADFGVARVKAQSGVMTAETGTYRWMAPEVIEHKPYDHKADVFSF 475
+K +N+L++ +K+ DFGV+ S + + GT +M+PE ++ Y ++D++S
Sbjct: 131 VKPSNILVNSRGEIKLCDFGVSGQLIDS-MANSFVGTRSYMSPERLQGTHYSVQSDIWSM 189
Query: 476 GIVLWELLTGKLP 488
G+ L E+ G+ P
Sbjct: 190 GLSLVEMAVGRYP 202
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 88/166 (53%), Gaps = 8/166 (4%)
Query: 331 DMQKEFAQEVFIMRKVR-HKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKL 389
++++ +EV I+RKV H N++Q +V + M G ++DYL + K
Sbjct: 65 ELREATLKEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTE-KVTLSE 123
Query: 390 PSLLKVAIDVSKGMNYLHQNNIIHRDLKAANLLMDENEVVKVADFGVARVKAQSGVMTAE 449
K+ + + + LH+ NI+HRDLK N+L+D++ +K+ DFG + + +
Sbjct: 124 KETRKIMRALLEVICALHKLNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKLRSV 183
Query: 450 TGTYRWMAPEVIE------HKPYDHKADVFSFGIVLWELLTGKLPY 489
GT ++APE+IE H Y + D++S G++++ LL G P+
Sbjct: 184 CGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPF 229
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 103/215 (47%), Gaps = 25/215 (11%)
Query: 286 VWEIDPKHLKFGSKVASGSYGDLYRG--TYCSQDVAIKVLKPERINSDMQKEFAQEVFIM 343
+WE+ P+ + S V SG+YG + T VA+K L + K +E+ ++
Sbjct: 40 IWEV-PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL 98
Query: 344 RKVRHKNVVQFIGACTKPPSL------CIVTEFMSGGSVYDYLHKLKGVFKLPSLLK--- 394
+ ++H+NV+ + T SL +VT M L + K L
Sbjct: 99 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGA--------DLNNIVKCQKLTDDHV 150
Query: 395 --VAIDVSKGMNYLHQNNIIHRDLKAANLLMDENEVVKVADFGVARVKAQSGVMTAETGT 452
+ + +G+ Y+H +IIHRDLK +NL ++E+ +K+ DFG+AR M T
Sbjct: 151 QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMXGYVAT 208
Query: 453 YRWMAPEV-IEHKPYDHKADVFSFGIVLWELLTGK 486
+ APE+ + Y+ D++S G ++ ELLTG+
Sbjct: 209 RWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 243
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 105/206 (50%), Gaps = 23/206 (11%)
Query: 298 SKVASGSYGDLYRGTY--CSQDVAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQFI 355
+K+ G++G++++ + Q VA+K + E +E+ I++ ++H+NVV I
Sbjct: 24 AKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLI 83
Query: 356 GAC---TKPPSLCIVTEFMSGGSVYDYL-HKLKGV-------FKLPSLLKVAIDVSKGMN 404
C P + C + ++ V+D+ H L G+ F L + +V + G+
Sbjct: 84 EICRTKASPYNRCKGSIYL----VFDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLLNGLY 139
Query: 405 YLHQNNIIHRDLKAANLLMDENEVVKVADFGVARV-----KAQSGVMTAETGTYRWMAPE 459
Y+H+N I+HRD+KAAN+L+ + V+K+ADFG+AR +Q T + PE
Sbjct: 140 YIHRNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLWYRPPE 199
Query: 460 -VIEHKPYDHKADVFSFGIVLWELLT 484
++ + Y D++ G ++ E+ T
Sbjct: 200 LLLGERDYGPPIDLWGAGCIMAEMWT 225
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 109/221 (49%), Gaps = 28/221 (12%)
Query: 291 PKHLK----FGSKVASGSYGDL---YRGTYCSQDVAIKVLKPERINSDMQKE------FA 337
PK L+ + SG+ G++ + C + VAIK++ + +E
Sbjct: 5 PKALRDEYIMSKTLGSGACGEVKLAFERKTCKK-VAIKIISKRKFAIGSAREADPALNVE 63
Query: 338 QEVFIMRKVRHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYL---HKLKGVFKLPSLLK 394
E+ I++K+ H +++ I IV E M GG ++D + +LK +
Sbjct: 64 TEIEILKKLNHPCIIK-IKNFFDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQ 122
Query: 395 VAIDVSKGMNYLHQNNIIHRDLKAANLLM---DENEVVKVADFGVARVKAQSGVMTAETG 451
+ + V YLH+N IIHRDLK N+L+ +E+ ++K+ DFG +++ ++ +M G
Sbjct: 123 MLLAV----QYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCG 178
Query: 452 TYRWMAPEV---IEHKPYDHKADVFSFGIVLWELLTGKLPY 489
T ++APEV + Y+ D +S G++L+ L+G P+
Sbjct: 179 TPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPF 219
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 109/221 (49%), Gaps = 28/221 (12%)
Query: 291 PKHLK----FGSKVASGSYGDL---YRGTYCSQDVAIKVLKPERINSDMQKE------FA 337
PK L+ + SG+ G++ + C + VAIK++ + +E
Sbjct: 4 PKALRDEYIMSKTLGSGACGEVKLAFERKTCKK-VAIKIISKRKFAIGSAREADPALNVE 62
Query: 338 QEVFIMRKVRHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYL---HKLKGVFKLPSLLK 394
E+ I++K+ H +++ I IV E M GG ++D + +LK +
Sbjct: 63 TEIEILKKLNHPCIIK-IKNFFDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQ 121
Query: 395 VAIDVSKGMNYLHQNNIIHRDLKAANLLM---DENEVVKVADFGVARVKAQSGVMTAETG 451
+ + V YLH+N IIHRDLK N+L+ +E+ ++K+ DFG +++ ++ +M G
Sbjct: 122 MLLAV----QYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCG 177
Query: 452 TYRWMAPEV---IEHKPYDHKADVFSFGIVLWELLTGKLPY 489
T ++APEV + Y+ D +S G++L+ L+G P+
Sbjct: 178 TPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPF 218
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 109/221 (49%), Gaps = 28/221 (12%)
Query: 291 PKHLK----FGSKVASGSYGDL---YRGTYCSQDVAIKVLKPERINSDMQKE------FA 337
PK L+ + SG+ G++ + C + VAIK++ + +E
Sbjct: 11 PKALRDEYIMSKTLGSGACGEVKLAFERKTCKK-VAIKIISKRKFAIGSAREADPALNVE 69
Query: 338 QEVFIMRKVRHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYL---HKLKGVFKLPSLLK 394
E+ I++K+ H +++ I IV E M GG ++D + +LK +
Sbjct: 70 TEIEILKKLNHPCIIK-IKNFFDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQ 128
Query: 395 VAIDVSKGMNYLHQNNIIHRDLKAANLLM---DENEVVKVADFGVARVKAQSGVMTAETG 451
+ + V YLH+N IIHRDLK N+L+ +E+ ++K+ DFG +++ ++ +M G
Sbjct: 129 MLLAV----QYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCG 184
Query: 452 TYRWMAPEV---IEHKPYDHKADVFSFGIVLWELLTGKLPY 489
T ++APEV + Y+ D +S G++L+ L+G P+
Sbjct: 185 TPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPF 225
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 109/221 (49%), Gaps = 28/221 (12%)
Query: 291 PKHLK----FGSKVASGSYGDL---YRGTYCSQDVAIKVLKPERINSDMQKE------FA 337
PK L+ + SG+ G++ + C + VAIK++ + +E
Sbjct: 5 PKALRDEYIMSKTLGSGACGEVKLAFERKTCKK-VAIKIISKRKFAIGSAREADPALNVE 63
Query: 338 QEVFIMRKVRHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYL---HKLKGVFKLPSLLK 394
E+ I++K+ H +++ I IV E M GG ++D + +LK +
Sbjct: 64 TEIEILKKLNHPCIIK-IKNFFDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQ 122
Query: 395 VAIDVSKGMNYLHQNNIIHRDLKAANLLM---DENEVVKVADFGVARVKAQSGVMTAETG 451
+ + V YLH+N IIHRDLK N+L+ +E+ ++K+ DFG +++ ++ +M G
Sbjct: 123 MLLAV----QYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCG 178
Query: 452 TYRWMAPEV---IEHKPYDHKADVFSFGIVLWELLTGKLPY 489
T ++APEV + Y+ D +S G++L+ L+G P+
Sbjct: 179 TPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPF 219
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 105/206 (50%), Gaps = 23/206 (11%)
Query: 298 SKVASGSYGDLYRGTY--CSQDVAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQFI 355
+K+ G++G++++ + Q VA+K + E +E+ I++ ++H+NVV I
Sbjct: 23 AKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLI 82
Query: 356 GAC---TKPPSLCIVTEFMSGGSVYDYL-HKLKGV-------FKLPSLLKVAIDVSKGMN 404
C P + C + ++ V+D+ H L G+ F L + +V + G+
Sbjct: 83 EICRTKASPYNRCKGSIYL----VFDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLLNGLY 138
Query: 405 YLHQNNIIHRDLKAANLLMDENEVVKVADFGVARV-----KAQSGVMTAETGTYRWMAPE 459
Y+H+N I+HRD+KAAN+L+ + V+K+ADFG+AR +Q T + PE
Sbjct: 139 YIHRNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLWYRPPE 198
Query: 460 -VIEHKPYDHKADVFSFGIVLWELLT 484
++ + Y D++ G ++ E+ T
Sbjct: 199 LLLGERDYGPPIDLWGAGCIMAEMWT 224
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 109/221 (49%), Gaps = 28/221 (12%)
Query: 291 PKHLK----FGSKVASGSYGDL---YRGTYCSQDVAIKVLKPERINSDMQKE------FA 337
PK L+ + SG+ G++ + C + VAIK++ + +E
Sbjct: 5 PKALRDEYIMSKTLGSGACGEVKLAFERKTCKK-VAIKIISKRKFAIGSAREADPALNVE 63
Query: 338 QEVFIMRKVRHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYL---HKLKGVFKLPSLLK 394
E+ I++K+ H +++ I IV E M GG ++D + +LK +
Sbjct: 64 TEIEILKKLNHPCIIK-IKNFFDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQ 122
Query: 395 VAIDVSKGMNYLHQNNIIHRDLKAANLLM---DENEVVKVADFGVARVKAQSGVMTAETG 451
+ + V YLH+N IIHRDLK N+L+ +E+ ++K+ DFG +++ ++ +M G
Sbjct: 123 MLLAV----QYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCG 178
Query: 452 TYRWMAPEV---IEHKPYDHKADVFSFGIVLWELLTGKLPY 489
T ++APEV + Y+ D +S G++L+ L+G P+
Sbjct: 179 TPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPF 219
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 56/193 (29%), Positives = 104/193 (53%), Gaps = 4/193 (2%)
Query: 298 SKVASGSYGDLYRGTY-CSQDVAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQFIG 356
S++ +G+ G +++ ++ S V + L I ++ + +E+ ++ + +V F G
Sbjct: 39 SELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYG 98
Query: 357 ACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNN-IIHRD 415
A + I E M GGS+ D + K G L KV+I V KG+ YL + + I+HRD
Sbjct: 99 AFYSDGEISICMEHMDGGSL-DQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRD 157
Query: 416 LKAANLLMDENEVVKVADFGVARVKAQSGVMTAETGTYRWMAPEVIEHKPYDHKADVFSF 475
+K +N+L++ +K+ DFGV+ S + + GT +M+PE ++ Y ++D++S
Sbjct: 158 VKPSNILVNSRGEIKLCDFGVSGQLIDS-MANSFVGTRSYMSPERLQGTHYSVQSDIWSM 216
Query: 476 GIVLWELLTGKLP 488
G+ L E+ G+ P
Sbjct: 217 GLSLVEMAVGRYP 229
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 64/240 (26%), Positives = 115/240 (47%), Gaps = 36/240 (15%)
Query: 286 VWEIDPKHLKFGSKVASGSYGDLYRGTYCSQ-------DVAIKVLKPERINSDMQKEFAQ 338
V+++ P++ S + G+YG CS VAIK + P + Q+ +
Sbjct: 22 VFDVGPRYTNL-SYIGEGAYG-----MVCSAYDNLNKVRVAIKKISPFEHQTYCQRTL-R 74
Query: 339 EVFIMRKVRHKNVVQFIGACTKPPSL------CIVTEFMSGGSVYDYLHKLKGVFKLPS- 391
E+ I+ + RH+N++ I + P++ IV + M L+KL L +
Sbjct: 75 EIKILLRFRHENIIG-INDIIRAPTIEQMKDVYIVQDLMETD-----LYKLLKTQHLSND 128
Query: 392 -LLKVAIDVSKGMNYLHQNNIIHRDLKAANLLMDENEVVKVADFGVARVK----AQSGVM 446
+ + +G+ Y+H N++HRDLK +NLL++ +K+ DFG+ARV +G +
Sbjct: 129 HICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFL 188
Query: 447 TAETGTYRWMAPEV-IEHKPYDHKADVFSFGIVLWELLTGKLPY---EYLTPLQAAVGVV 502
T + APE+ + K Y D++S G +L E+L+ + + YL L +G++
Sbjct: 189 XEXVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGIL 248
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 64/240 (26%), Positives = 115/240 (47%), Gaps = 36/240 (15%)
Query: 286 VWEIDPKHLKFGSKVASGSYGDLYRGTYCSQ-------DVAIKVLKPERINSDMQKEFAQ 338
V+++ P++ S + G+YG CS VAIK + P + Q+ +
Sbjct: 23 VFDVGPRYTNL-SYIGEGAYG-----MVCSAYDNLNKVRVAIKKISPFEHQTYCQRTL-R 75
Query: 339 EVFIMRKVRHKNVVQFIGACTKPPSL------CIVTEFMSGGSVYDYLHKLKGVFKLPS- 391
E+ I+ + RH+N++ I + P++ IV + M L+KL L +
Sbjct: 76 EIKILLRFRHENIIG-INDIIRAPTIEQMKDVYIVQDLMETD-----LYKLLKTQHLSND 129
Query: 392 -LLKVAIDVSKGMNYLHQNNIIHRDLKAANLLMDENEVVKVADFGVARVK----AQSGVM 446
+ + +G+ Y+H N++HRDLK +NLL++ +K+ DFG+ARV +G +
Sbjct: 130 HICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFL 189
Query: 447 TAETGTYRWMAPEV-IEHKPYDHKADVFSFGIVLWELLTGKLPY---EYLTPLQAAVGVV 502
T + APE+ + K Y D++S G +L E+L+ + + YL L +G++
Sbjct: 190 XEXVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGIL 249
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 56/193 (29%), Positives = 104/193 (53%), Gaps = 4/193 (2%)
Query: 298 SKVASGSYGDLYRGTY-CSQDVAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQFIG 356
S++ +G+ G +++ ++ S V + L I ++ + +E+ ++ + +V F G
Sbjct: 12 SELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYG 71
Query: 357 ACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNN-IIHRD 415
A + I E M GGS+ D + K G L KV+I V KG+ YL + + I+HRD
Sbjct: 72 AFYSDGEISICMEHMDGGSL-DQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRD 130
Query: 416 LKAANLLMDENEVVKVADFGVARVKAQSGVMTAETGTYRWMAPEVIEHKPYDHKADVFSF 475
+K +N+L++ +K+ DFGV+ S + + GT +M+PE ++ Y ++D++S
Sbjct: 131 VKPSNILVNSRGEIKLCDFGVSGQLIDS-MANSFVGTRSYMSPERLQGTHYSVQSDIWSM 189
Query: 476 GIVLWELLTGKLP 488
G+ L E+ G+ P
Sbjct: 190 GLSLVEMAVGRYP 202
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 56/193 (29%), Positives = 104/193 (53%), Gaps = 4/193 (2%)
Query: 298 SKVASGSYGDLYRGTY-CSQDVAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQFIG 356
S++ +G+ G +++ ++ S V + L I ++ + +E+ ++ + +V F G
Sbjct: 12 SELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYG 71
Query: 357 ACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNN-IIHRD 415
A + I E M GGS+ D + K G L KV+I V KG+ YL + + I+HRD
Sbjct: 72 AFYSDGEISICMEHMDGGSL-DQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRD 130
Query: 416 LKAANLLMDENEVVKVADFGVARVKAQSGVMTAETGTYRWMAPEVIEHKPYDHKADVFSF 475
+K +N+L++ +K+ DFGV+ S + + GT +M+PE ++ Y ++D++S
Sbjct: 131 VKPSNILVNSRGEIKLCDFGVSGQLIDS-MANSFVGTRSYMSPERLQGTHYSVQSDIWSM 189
Query: 476 GIVLWELLTGKLP 488
G+ L E+ G+ P
Sbjct: 190 GLSLVEMAVGRYP 202
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 99/200 (49%), Gaps = 5/200 (2%)
Query: 294 LKFGSKVASGSYGDLY--RGTYCSQDVAIKVLKPERINSD-MQKEFAQEVFIMRKVRHKN 350
+ G + G +G++Y R VA+KVL +I + ++ + +E+ I + H N
Sbjct: 25 FEIGRPLGKGKFGNVYLAREKKSHFIVALKVLFKSQIEKEGVEHQLRREIEIQAHLHHPN 84
Query: 351 VVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNN 410
+++ + ++ E+ G +Y L K F + +++ + Y H
Sbjct: 85 ILRLYNYFYDRRRIYLILEYAPRGELYKELQK-SCTFDEQRTATIMEELADALMYCHGKK 143
Query: 411 IIHRDLKAANLLMDENEVVKVADFGVARVKAQSGVMTAETGTYRWMAPEVIEHKPYDHKA 470
+IHRD+K NLL+ +K+ADFG + V A S GT ++ PE+IE + ++ K
Sbjct: 144 VIHRDIKPENLLLGLKGELKIADFGWS-VHAPSLRRKTMCGTLDYLPPEMIEGRMHNEKV 202
Query: 471 DVFSFGIVLWELLTGKLPYE 490
D++ G++ +ELL G P+E
Sbjct: 203 DLWCIGVLCYELLVGNPPFE 222
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 103/215 (47%), Gaps = 25/215 (11%)
Query: 286 VWEIDPKHLKFGSKVASGSYGDLYRG--TYCSQDVAIKVLKPERINSDMQKEFAQEVFIM 343
+WE+ P+ + S V SG+YG + T VA+K L + K +E+ ++
Sbjct: 17 IWEV-PERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLL 75
Query: 344 RKVRHKNVVQFIGACTKPPSL------CIVTEFMSGGSVYDYLHKLKGVFKLPSLLK--- 394
+ ++H+NV+ + T SL +VT M L + K L
Sbjct: 76 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGAD--------LNNIVKCQKLTDDHV 127
Query: 395 --VAIDVSKGMNYLHQNNIIHRDLKAANLLMDENEVVKVADFGVARVKAQSGVMTAETGT 452
+ + +G+ Y+H +IIHRDLK +NL ++E+ +K+ DF +AR MT T
Sbjct: 128 QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFYLAR--HTDDEMTGYVAT 185
Query: 453 YRWMAPEV-IEHKPYDHKADVFSFGIVLWELLTGK 486
+ APE+ + Y+ D++S G ++ ELLTG+
Sbjct: 186 RWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 44/196 (22%), Positives = 99/196 (50%), Gaps = 8/196 (4%)
Query: 299 KVASGSYGDLYRGTYCSQDVAIKVLKPERINSDM---QKEFAQEVFIMRKVRHKNVVQFI 355
++ SG++G ++R C + +V + IN+ + E+ IM ++ H ++
Sbjct: 58 ELGSGAFGVVHR---CVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLH 114
Query: 356 GACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRD 415
A + ++ EF+SGG ++D + ++ +G+ ++H+++I+H D
Sbjct: 115 DAFEDKYEMVLILEFLSGGELFDRIAAEDYKMSEAEVINYMRQACEGLKHMHEHSIVHLD 174
Query: 416 LKAANLLMDENEV--VKVADFGVARVKAQSGVMTAETGTYRWMAPEVIEHKPYDHKADVF 473
+K N++ + + VK+ DFG+A ++ T T + APE+++ +P D++
Sbjct: 175 IKPENIMCETKKASSVKIIDFGLATKLNPDEIVKVTTATAEFAAPEIVDREPVGFYTDMW 234
Query: 474 SFGIVLWELLTGKLPY 489
+ G++ + LL+G P+
Sbjct: 235 AIGVLGYVLLSGLSPF 250
>pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain
Length = 316
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 60/192 (31%), Positives = 105/192 (54%), Gaps = 20/192 (10%)
Query: 315 SQDVAIKVLKPERINSDMQKEFAQEVFIMRKVR-HKNVVQFIGACTKPPSLCIVTEFMSG 373
SQ+ A+K++ E+ ++ +EV ++ + + H+NV++ I + +V E M G
Sbjct: 38 SQEYAVKII--EKQPGHIRSRVFREVEMLYQCQGHRNVLELIEFFEEEDRFYLVFEKMRG 95
Query: 374 GSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDLKAANLLMDE-NEV--VK 430
GS+ ++HK + +L + + V DV+ +++LH I HRDLK N+L + N+V VK
Sbjct: 96 GSILSHIHKRRHFNELEASV-VVQDVASALDFLHNKGIAHRDLKPENILCEHPNQVSPVK 154
Query: 431 VADF----GVARVKAQSGVMTAE----TGTYRWMAPEVI-----EHKPYDHKADVFSFGI 477
+ DF G+ S + T E G+ +MAPEV+ E YD + D++S G+
Sbjct: 155 ICDFDLGSGIKLNGDCSPISTPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGV 214
Query: 478 VLWELLTGKLPY 489
+L+ LL+G P+
Sbjct: 215 ILYILLSGYPPF 226
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 46/179 (25%), Positives = 95/179 (53%), Gaps = 5/179 (2%)
Query: 315 SQDVAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQFIGACTKPPSLCIVTEFMSGG 374
Q+ A K++ +++++ ++ +E I R ++H N+V+ + ++ +V + ++GG
Sbjct: 29 GQEYAAKIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDSISEEGFHYLVFDLVTGG 88
Query: 375 SVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDLKAANLLM---DENEVVKV 431
+++ + + + + + +N+ H N I+HRDLK NLL+ + VK+
Sbjct: 89 ELFEDI-VAREYYSEADASHCIQQILESVNHCHLNGIVHRDLKPENLLLASKSKGAAVKL 147
Query: 432 ADFGVA-RVKAQSGVMTAETGTYRWMAPEVIEHKPYDHKADVFSFGIVLWELLTGKLPY 489
ADFG+A V+ GT +++PEV+ PY D+++ G++L+ LL G P+
Sbjct: 148 ADFGLAIEVQGDQQAWFGFAGTPGYLSPEVLRKDPYGKPVDMWACGVILYILLVGYPPF 206
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 54/186 (29%), Positives = 87/186 (46%), Gaps = 30/186 (16%)
Query: 316 QDVAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQFIGACTKPPSL------CIVTE 369
++VAIK L N K +E+ +M+ V HKN++ + T SL IV E
Sbjct: 50 RNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVME 109
Query: 370 FMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSK----------GMNYLHQNNIIHRDLKAA 419
M L ++++ +D + G+ +LH IIHRDLK +
Sbjct: 110 LMDAN--------------LSQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPS 155
Query: 420 NLLMDENEVVKVADFGVARVKAQSGVMTAETGTYRWMAPEVIEHKPYDHKADVFSFGIVL 479
N+++ + +K+ DFG+AR S +MT T + APEVI Y D++S G ++
Sbjct: 156 NIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIM 215
Query: 480 WELLTG 485
E++ G
Sbjct: 216 GEMIKG 221
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 52/176 (29%), Positives = 85/176 (48%), Gaps = 10/176 (5%)
Query: 316 QDVAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQFIGACTKPPSL------CIVTE 369
++VAIK L N K +E+ +M+ V HKN++ + T SL IV E
Sbjct: 51 RNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVME 110
Query: 370 FMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDLKAANLLMDENEVV 429
M + ++ + + + G+ +LH IIHRDLK +N+++ + +
Sbjct: 111 LMDA----NLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTL 166
Query: 430 KVADFGVARVKAQSGVMTAETGTYRWMAPEVIEHKPYDHKADVFSFGIVLWELLTG 485
K+ DFG+AR S +MT T + APEVI Y D++S G ++ E++ G
Sbjct: 167 KILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKG 222
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 52/176 (29%), Positives = 85/176 (48%), Gaps = 10/176 (5%)
Query: 316 QDVAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQFIGACTKPPSL------CIVTE 369
++VAIK L N K +E+ +M+ V HKN++ + T SL IV E
Sbjct: 50 RNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVME 109
Query: 370 FMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDLKAANLLMDENEVV 429
M + ++ + + + G+ +LH IIHRDLK +N+++ + +
Sbjct: 110 LMDA----NLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTL 165
Query: 430 KVADFGVARVKAQSGVMTAETGTYRWMAPEVIEHKPYDHKADVFSFGIVLWELLTG 485
K+ DFG+AR S +MT T + APEVI Y D++S G ++ E++ G
Sbjct: 166 KILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 52/176 (29%), Positives = 85/176 (48%), Gaps = 10/176 (5%)
Query: 316 QDVAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQFIGACTKPPSL------CIVTE 369
++VAIK L N K +E+ +M+ V HKN++ + T SL IV E
Sbjct: 50 RNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVME 109
Query: 370 FMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDLKAANLLMDENEVV 429
M + ++ + + + G+ +LH IIHRDLK +N+++ + +
Sbjct: 110 LMDA----NLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTL 165
Query: 430 KVADFGVARVKAQSGVMTAETGTYRWMAPEVIEHKPYDHKADVFSFGIVLWELLTG 485
K+ DFG+AR S +MT T + APEVI Y D++S G ++ E++ G
Sbjct: 166 KILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 79.0 bits (193), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 46/179 (25%), Positives = 95/179 (53%), Gaps = 5/179 (2%)
Query: 315 SQDVAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQFIGACTKPPSLCIVTEFMSGG 374
Q+ A K++ +++++ ++ +E I R ++H N+V+ + ++ +V + ++GG
Sbjct: 29 GQEYAAKIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDSISEEGFHYLVFDLVTGG 88
Query: 375 SVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDLKAANLLM---DENEVVKV 431
+++ + + + + + +N+ H N I+HRDLK NLL+ + VK+
Sbjct: 89 ELFEDI-VAREYYSEADASHCIQQILESVNHCHLNGIVHRDLKPENLLLASKSKGAAVKL 147
Query: 432 ADFGVA-RVKAQSGVMTAETGTYRWMAPEVIEHKPYDHKADVFSFGIVLWELLTGKLPY 489
ADFG+A V+ GT +++PEV+ PY D+++ G++L+ LL G P+
Sbjct: 148 ADFGLAIEVQGDQQAWFGFAGTPGYLSPEVLRKDPYGKPVDMWACGVILYILLVGYPPF 206
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 79.0 bits (193), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 103/215 (47%), Gaps = 25/215 (11%)
Query: 286 VWEIDPKHLKFGSKVASGSYGDLYRG--TYCSQDVAIKVLKPERINSDMQKEFAQEVFIM 343
+WE+ P+ + S V SG+YG + T VA+K L + K +E+ ++
Sbjct: 17 IWEV-PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL 75
Query: 344 RKVRHKNVVQFIGACTKPPSL------CIVTEFMSGGSVYDYLHKLKGVFKLPSLLK--- 394
+ ++H+NV+ + T SL +VT M L + K L
Sbjct: 76 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGA--------DLNNIVKCQKLTDDHV 127
Query: 395 --VAIDVSKGMNYLHQNNIIHRDLKAANLLMDENEVVKVADFGVARVKAQSGVMTAETGT 452
+ + +G+ Y+H +IIHRDLK +NL ++E+ +K+ FG+AR MT T
Sbjct: 128 QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILGFGLAR--HTDDEMTGYVAT 185
Query: 453 YRWMAPEV-IEHKPYDHKADVFSFGIVLWELLTGK 486
+ APE+ + Y+ D++S G ++ ELLTG+
Sbjct: 186 RWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 79.0 bits (193), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 98/192 (51%), Gaps = 8/192 (4%)
Query: 299 KVASGSYGDLY--RGTYCSQDVAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQFIG 356
K+ G+YG +Y R + VA+K ++ + + +E+ +++++ H N+V+ +
Sbjct: 13 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLD 72
Query: 357 ACTKPPSLCIVTEFMSGGSVYDYL--HKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHR 414
L +V EF+S + D++ L G+ LP + + +G+ + H + ++HR
Sbjct: 73 VIHTENKLYLVFEFLSM-DLKDFMDASALTGI-PLPLIKSYLFQLLQGLAFCHSHRVLHR 130
Query: 415 DLKAANLLMDENEVVKVADFGVARV-KAQSGVMTAETGTYRWMAPEV-IEHKPYDHKADV 472
DLK NLL++ +K+ADFG+AR E T + APE+ + K Y D+
Sbjct: 131 DLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDI 190
Query: 473 FSFGIVLWELLT 484
+S G + E++T
Sbjct: 191 WSLGCIFAEMVT 202
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 79.0 bits (193), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 87/166 (52%), Gaps = 8/166 (4%)
Query: 331 DMQKEFAQEVFIMRKVR-HKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKL 389
++++ +EV I+RKV H N++Q +V + M G ++DYL + K
Sbjct: 65 ELREATLKEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTE-KVTLSE 123
Query: 390 PSLLKVAIDVSKGMNYLHQNNIIHRDLKAANLLMDENEVVKVADFGVARVKAQSGVMTAE 449
K+ + + + LH+ NI+HRDLK N+L+D++ +K+ DFG + +
Sbjct: 124 KETRKIMRALLEVICALHKLNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKLREV 183
Query: 450 TGTYRWMAPEVIE------HKPYDHKADVFSFGIVLWELLTGKLPY 489
GT ++APE+IE H Y + D++S G++++ LL G P+
Sbjct: 184 CGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPF 229
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 79.0 bits (193), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 56/193 (29%), Positives = 104/193 (53%), Gaps = 4/193 (2%)
Query: 298 SKVASGSYGDLYRGTYC-SQDVAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQFIG 356
S++ +G+ G +++ ++ S V + L I ++ + +E+ ++ + +V F G
Sbjct: 31 SELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYG 90
Query: 357 ACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNN-IIHRD 415
A + I E M GGS+ D + K G L KV+I V KG+ YL + + I+HRD
Sbjct: 91 AFYSDGEISICMEHMDGGSL-DQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRD 149
Query: 416 LKAANLLMDENEVVKVADFGVARVKAQSGVMTAETGTYRWMAPEVIEHKPYDHKADVFSF 475
+K +N+L++ +K+ DFGV+ S + + GT +M+PE ++ Y ++D++S
Sbjct: 150 VKPSNILVNSRGEIKLCDFGVSGQLIDS-MANSFVGTRSYMSPERLQGTHYSVQSDIWSM 208
Query: 476 GIVLWELLTGKLP 488
G+ L E+ G+ P
Sbjct: 209 GLSLVEMAVGRYP 221
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 79.0 bits (193), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 98/192 (51%), Gaps = 8/192 (4%)
Query: 299 KVASGSYGDLY--RGTYCSQDVAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQFIG 356
K+ G+YG +Y R + VA+K ++ + + +E+ +++++ H N+V+ +
Sbjct: 12 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLD 71
Query: 357 ACTKPPSLCIVTEFMSGGSVYDYL--HKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHR 414
L +V EF+S + D++ L G+ LP + + +G+ + H + ++HR
Sbjct: 72 VIHTENKLYLVFEFLSM-DLKDFMDASALTGI-PLPLIKSYLFQLLQGLAFCHSHRVLHR 129
Query: 415 DLKAANLLMDENEVVKVADFGVARV-KAQSGVMTAETGTYRWMAPEV-IEHKPYDHKADV 472
DLK NLL++ +K+ADFG+AR E T + APE+ + K Y D+
Sbjct: 130 DLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDI 189
Query: 473 FSFGIVLWELLT 484
+S G + E++T
Sbjct: 190 WSLGCIFAEMVT 201
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 78.6 bits (192), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 101/218 (46%), Gaps = 24/218 (11%)
Query: 316 QDVAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQFIGACTKPPSL------CIVTE 369
++VAIK L N K +E+ +M+ V HKN++ + T SL IV E
Sbjct: 50 RNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVME 109
Query: 370 FMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDLKAANLLMDENEVV 429
M + ++ + + + G+ +LH IIHRDLK +N+++ + +
Sbjct: 110 LMDA----NLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTL 165
Query: 430 KVADFGVARVKAQSGVMTAETGTYRWMAPEVIEHKPYDHKADVFSFGIVLWELLTGKLPY 489
K+ DFG+AR S +M E T + APEVI Y D++S G ++ E++ K+ +
Sbjct: 166 KILDFGLARTAGTSFMMEPEVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVCHKILF 225
Query: 490 ---EYL-----------TPLQAAVGVVQKVHHSFLEQR 513
+Y+ TP A + +Q +++E R
Sbjct: 226 PGRDYIDQWNKVIEQLGTPCPAFMKKLQPTVRNYVENR 263
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 78.6 bits (192), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 57/225 (25%), Positives = 113/225 (50%), Gaps = 16/225 (7%)
Query: 297 GSKVASGSYGDLYRGTYCSQDV--AIKVLKPERINSDMQ----KEFAQEVFIMRKVRHKN 350
G ++ SG + + + S + A K +K R S + ++ +EV I+++++H N
Sbjct: 16 GEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPN 75
Query: 351 VVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFK--LPSLLKVAIDVSKGMNYLHQ 408
V+ + ++ E ++GG ++D+L + + + + LK ++ G+ YLH
Sbjct: 76 VITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILN---GVYYLHS 132
Query: 409 NNIIHRDLKAANLLMDENEV----VKVADFGVARVKAQSGVMTAETGTYRWMAPEVIEHK 464
I H DLK N+++ + V +K+ DFG+A GT ++APE++ ++
Sbjct: 133 LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYE 192
Query: 465 PYDHKADVFSFGIVLWELLTGKLPYEYLTPLQAAVGVVQKVHHSF 509
P +AD++S G++ + LL+G P+ T Q + V V++ F
Sbjct: 193 PLGLEADMWSIGVITYILLSGASPFLGDTK-QETLANVSAVNYEF 236
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 78.6 bits (192), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 104/215 (48%), Gaps = 13/215 (6%)
Query: 299 KVASGSYGDLYRGTYCSQD--VAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQFIG 356
K+ G+Y +Y+G D VA+K ++ E +EV +++ ++H N+V
Sbjct: 9 KLGEGTYATVYKGKSKLTDNLVALKEIRLEH-EEGAPCTAIREVSLLKDLKHANIVTLHD 67
Query: 357 ACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDL 416
SL +V E++ + YL + + ++ + +G+ Y H+ ++HRDL
Sbjct: 68 IIHTEKSLTLVFEYLDK-DLKQYLDDCGNIINMHNVKLFLFQLLRGLAYCHRQKVLHRDL 126
Query: 417 KAANLLMDENEVVKVADFGVARVKA-QSGVMTAETGTYRWMAPEV-IEHKPYDHKADVFS 474
K NLL++E +K+ADFG+AR K+ + E T + P++ + Y + D++
Sbjct: 127 KPQNLLINERGELKLADFGLARAKSIPTKTYDNEVVTLWYRPPDILLGSTDYSTQIDMWG 186
Query: 475 FGIVLWELLTGKLPYEYLTPLQAAVGVVQKVHHSF 509
G + +E+ TG+ PL V +++H F
Sbjct: 187 VGCIFYEMATGR-------PLFPGSTVEEQLHFIF 214
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 78.6 bits (192), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 58/198 (29%), Positives = 104/198 (52%), Gaps = 14/198 (7%)
Query: 298 SKVASGSYGDLYRGTY-CSQDVAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQFIG 356
S++ +G+ G +++ ++ S V + L I ++ + +E+ ++ + +V F G
Sbjct: 15 SELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYG 74
Query: 357 ACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNN-IIHRD 415
A + I E M GGS+ D + K G L KV+I V KG+ YL + + I+HRD
Sbjct: 75 AFYSDGEISICMEHMDGGSL-DQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRD 133
Query: 416 LKAANLLMDENEVVKVADFGVARVKAQSGVMTAE-----TGTYRWMAPEVIEHKPYDHKA 470
+K +N+L++ +K+ DFGV SG + E GT +M+PE ++ Y ++
Sbjct: 134 VKPSNILVNSRGEIKLCDFGV------SGQLIDEMANEFVGTRSYMSPERLQGTHYSVQS 187
Query: 471 DVFSFGIVLWELLTGKLP 488
D++S G+ L E+ G+ P
Sbjct: 188 DIWSMGLSLVEMAVGRYP 205
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 78.6 bits (192), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 108/218 (49%), Gaps = 22/218 (10%)
Query: 291 PKHLK----FGSKVASGSYGDL---YRGTYCSQDVAIKVLKPERINSDMQKE------FA 337
PK L+ + SG+ G++ + C + VAI+++ + +E
Sbjct: 144 PKALRDEYIMSKTLGSGACGEVKLAFERKTCKK-VAIRIISKRKFAIGSAREADPALNVE 202
Query: 338 QEVFIMRKVRHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAI 397
E+ I++K+ H +++ I IV E M GG ++D + K + K +
Sbjct: 203 TEIEILKKLNHPCIIK-IKNFFDAEDYYIVLELMEGGELFDKVVGNKRL-KEATCKLYFY 260
Query: 398 DVSKGMNYLHQNNIIHRDLKAANLLM---DENEVVKVADFGVARVKAQSGVMTAETGTYR 454
+ + YLH+N IIHRDLK N+L+ +E+ ++K+ DFG +++ ++ +M GT
Sbjct: 261 QMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPT 320
Query: 455 WMAPEV---IEHKPYDHKADVFSFGIVLWELLTGKLPY 489
++APEV + Y+ D +S G++L+ L+G P+
Sbjct: 321 YLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPF 358
>pdb|4FVP|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain (Apo
Form)
pdb|4FVQ|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain
(Mg-Atp-Bound Form)
Length = 289
Score = 78.6 bits (192), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 97/198 (48%), Gaps = 19/198 (9%)
Query: 297 GSKVASGSYGDLYRGTYCSQDVAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQFIG 356
G + G YG L+ +V +KVL ++ + + + F + +M K+ HK++V G
Sbjct: 27 GVRREVGDYGQLHE-----TEVLLKVL--DKAHRNYSESFFEAASMMSKLSHKHLVLNYG 79
Query: 357 ACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDL 416
C +V EF+ GS+ YL K K + L+VA ++ M++L +N +IH ++
Sbjct: 80 VCVCGDENILVQEFVKFGSLDTYLKKNKNCINILWKLEVAKQLAAAMHFLEENTLIHGNV 139
Query: 417 KAANLLMDENE--------VVKVADFGVARVKAQSGVMTAETGTYRWMAPEVIEH-KPYD 467
A N+L+ E +K++D G++ ++ W+ PE IE+ K +
Sbjct: 140 CAKNILLIREEDRKTGNPPFIKLSDPGISITVLPKDILQERIP---WVPPECIENPKNLN 196
Query: 468 HKADVFSFGIVLWELLTG 485
D +SFG LWE+ +G
Sbjct: 197 LATDKWSFGTTLWEICSG 214
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 78.6 bits (192), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 103/200 (51%), Gaps = 10/200 (5%)
Query: 292 KHLKFGSKVASGSYGDLY--RGTYCSQDVAIKVLKPERINSDMQKEFAQEVFIMRKVRHK 349
K+ K G K+ GSYG ++ R Q VAIK + ++K +E+ ++++++H
Sbjct: 4 KYEKIG-KIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHP 62
Query: 350 NVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAI--DVSKGMNYLH 407
N+V + + L +V E+ +++ +GV P L +I + +N+ H
Sbjct: 63 NLVNLLEVFRRKRRLHLVFEYCDHTVLHELDRYQRGV---PEHLVKSITWQTLQAVNFCH 119
Query: 408 QNNIIHRDLKAANLLMDENEVVKVADFGVAR-VKAQSGVMTAETGTYRWMAPE-VIEHKP 465
++N IHRD+K N+L+ ++ V+K+ DFG AR + S E T + +PE ++
Sbjct: 120 KHNCIHRDVKPENILITKHSVIKLCDFGFARLLTGPSDYYDDEVATRWYRSPELLVGDTQ 179
Query: 466 YDHKADVFSFGIVLWELLTG 485
Y DV++ G V ELL+G
Sbjct: 180 YGPPVDVWAIGCVFAELLSG 199
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 78.6 bits (192), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 103/215 (47%), Gaps = 25/215 (11%)
Query: 286 VWEIDPKHLKFGSKVASGSYGDLYRG--TYCSQDVAIKVLKPERINSDMQKEFAQEVFIM 343
+WE+ P+ + S V SG+YG + T VA+K L + K +E+ ++
Sbjct: 17 IWEV-PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL 75
Query: 344 RKVRHKNVVQFIGACTKPPSL------CIVTEFMSGGSVYDYLHKLKGVFKLPSLLK--- 394
+ ++H+NV+ + T SL +VT M L + K L
Sbjct: 76 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGA--------DLNNIVKCQKLTDDHV 127
Query: 395 --VAIDVSKGMNYLHQNNIIHRDLKAANLLMDENEVVKVADFGVARVKAQSGVMTAETGT 452
+ + +G+ Y+H +IIHRDLK +NL ++E+ +K+ D G+AR MT T
Sbjct: 128 QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDAGLAR--HTDDEMTGYVAT 185
Query: 453 YRWMAPEV-IEHKPYDHKADVFSFGIVLWELLTGK 486
+ APE+ + Y+ D++S G ++ ELLTG+
Sbjct: 186 RWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 78.6 bits (192), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 57/225 (25%), Positives = 113/225 (50%), Gaps = 16/225 (7%)
Query: 297 GSKVASGSYGDLYRGTYCSQDV--AIKVLKPERINSDMQ----KEFAQEVFIMRKVRHKN 350
G ++ SG + + + S + A K +K R S + ++ +EV I+++++H N
Sbjct: 16 GEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPN 75
Query: 351 VVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFK--LPSLLKVAIDVSKGMNYLHQ 408
V+ + ++ E ++GG ++D+L + + + + LK ++ G+ YLH
Sbjct: 76 VITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILN---GVYYLHS 132
Query: 409 NNIIHRDLKAANLLMDENEV----VKVADFGVARVKAQSGVMTAETGTYRWMAPEVIEHK 464
I H DLK N+++ + V +K+ DFG+A GT ++APE++ ++
Sbjct: 133 LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYE 192
Query: 465 PYDHKADVFSFGIVLWELLTGKLPYEYLTPLQAAVGVVQKVHHSF 509
P +AD++S G++ + LL+G P+ T Q + V V++ F
Sbjct: 193 PLGLEADMWSIGVITYILLSGASPFLGDTK-QETLANVSAVNYEF 236
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 78.6 bits (192), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 87/166 (52%), Gaps = 8/166 (4%)
Query: 331 DMQKEFAQEVFIMRKVR-HKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKL 389
++++ +EV I+RKV H N++Q +V + M G ++DYL + K
Sbjct: 52 ELREATLKEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTE-KVTLSE 110
Query: 390 PSLLKVAIDVSKGMNYLHQNNIIHRDLKAANLLMDENEVVKVADFGVARVKAQSGVMTAE 449
K+ + + + LH+ NI+HRDLK N+L+D++ +K+ DFG + +
Sbjct: 111 KETRKIMRALLEVICALHKLNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKLREV 170
Query: 450 TGTYRWMAPEVIE------HKPYDHKADVFSFGIVLWELLTGKLPY 489
GT ++APE+IE H Y + D++S G++++ LL G P+
Sbjct: 171 CGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPF 216
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 78.6 bits (192), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 57/225 (25%), Positives = 112/225 (49%), Gaps = 16/225 (7%)
Query: 297 GSKVASGSYGDLYRGTYCSQDV--AIKVLKPERINSDMQ----KEFAQEVFIMRKVRHKN 350
G ++ SG + + + S + A K +K R S + ++ +EV I+++++H N
Sbjct: 15 GEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPN 74
Query: 351 VVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFK--LPSLLKVAIDVSKGMNYLHQ 408
V+ + ++ E ++GG ++D+L + + + + LK + G+ YLH
Sbjct: 75 VITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLK---QILNGVYYLHS 131
Query: 409 NNIIHRDLKAANLLMDENEV----VKVADFGVARVKAQSGVMTAETGTYRWMAPEVIEHK 464
I H DLK N+++ + V +K+ DFG+A GT ++APE++ ++
Sbjct: 132 LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYE 191
Query: 465 PYDHKADVFSFGIVLWELLTGKLPYEYLTPLQAAVGVVQKVHHSF 509
P +AD++S G++ + LL+G P+ T Q + V V++ F
Sbjct: 192 PLGLEADMWSIGVITYILLSGASPFLGDTK-QETLANVSAVNYEF 235
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 78.6 bits (192), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 64/217 (29%), Positives = 105/217 (48%), Gaps = 12/217 (5%)
Query: 299 KVASGSYG--DLYRGTYCSQDVAIKVLKPERINSDMQKEFAQEVFI-MRKVRHKNVVQFI 355
++ G+YG + R Q +A+K ++ +NS QK ++ I MR V V F
Sbjct: 14 ELGRGAYGVVEKMRHVPSGQIMAVKRIR-ATVNSQEQKRLLMDLDISMRTVDCPFTVTFY 72
Query: 356 GACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPS--LLKVAIDVSKGMNYLHQN-NII 412
GA + + I E M Y + +P L K+A+ + K + +LH ++I
Sbjct: 73 GALFREGDVWICMELMDTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKLSVI 132
Query: 413 HRDLKAANLLMDENEVVKVADFGVARVKAQSGVMTAETGTYRWMAPEVI----EHKPYDH 468
HRD+K +N+L++ VK+ DFG++ + G +MAPE I K Y
Sbjct: 133 HRDVKPSNVLINALGQVKMCDFGISGYLVDDVAKDIDAGCKPYMAPERINPELNQKGYSV 192
Query: 469 KADVFSFGIVLWELLTGKLPYE-YLTPLQAAVGVVQK 504
K+D++S GI + EL + PY+ + TP Q VV++
Sbjct: 193 KSDIWSLGITMIELAILRFPYDSWGTPFQQLKQVVEE 229
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 78.6 bits (192), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 57/198 (28%), Positives = 105/198 (53%), Gaps = 11/198 (5%)
Query: 300 VASGSYGDLY--RGTYCSQDVAIKVLK---PERINSDMQKEFAQEVFIMRKVRHKNVVQF 354
+ G + +Y R +Q VAIK +K + + +E+ +++++ H N++
Sbjct: 18 LGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGL 77
Query: 355 IGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVS-KGMNYLHQNNIIH 413
+ A ++ +V +FM + + + K + PS +K + ++ +G+ YLHQ+ I+H
Sbjct: 78 LDAFGHKSNISLVFDFME--TDLEVIIKDNSLVLTPSHIKAYMLMTLQGLEYLHQHWILH 135
Query: 414 RDLKAANLLMDENEVVKVADFGVARVKAQSGVMTAETGTYRWM-APEVI-EHKPYDHKAD 471
RDLK NLL+DEN V+K+ADFG+A+ RW APE++ + Y D
Sbjct: 136 RDLKPNNLLLDENGVLKLADFGLAKSFGSPNRAYXHQVVTRWYRAPELLFGARMYGVGVD 195
Query: 472 VFSFGIVLWELLTGKLPY 489
+++ G +L ELL ++P+
Sbjct: 196 MWAVGCILAELLL-RVPF 212
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 78.6 bits (192), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 57/225 (25%), Positives = 112/225 (49%), Gaps = 16/225 (7%)
Query: 297 GSKVASGSYGDLYRGTYCSQDV--AIKVLKPERINSDMQ----KEFAQEVFIMRKVRHKN 350
G ++ SG + + + S + A K +K R S + ++ +EV I+++++H N
Sbjct: 16 GEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPN 75
Query: 351 VVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFK--LPSLLKVAIDVSKGMNYLHQ 408
V+ + ++ E ++GG ++D+L + + + + LK + G+ YLH
Sbjct: 76 VITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLK---QILNGVYYLHS 132
Query: 409 NNIIHRDLKAANLLMDENEV----VKVADFGVARVKAQSGVMTAETGTYRWMAPEVIEHK 464
I H DLK N+++ + V +K+ DFG+A GT ++APE++ ++
Sbjct: 133 LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYE 192
Query: 465 PYDHKADVFSFGIVLWELLTGKLPYEYLTPLQAAVGVVQKVHHSF 509
P +AD++S G++ + LL+G P+ T Q + V V++ F
Sbjct: 193 PLGLEADMWSIGVITYILLSGASPFLGDTK-QETLANVSAVNYEF 236
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 78.6 bits (192), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 108/218 (49%), Gaps = 22/218 (10%)
Query: 291 PKHLK----FGSKVASGSYGDL---YRGTYCSQDVAIKVLKPERINSDMQKE------FA 337
PK L+ + SG+ G++ + C + VAI+++ + +E
Sbjct: 130 PKALRDEYIMSKTLGSGACGEVKLAFERKTCKK-VAIRIISKRKFAIGSAREADPALNVE 188
Query: 338 QEVFIMRKVRHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAI 397
E+ I++K+ H +++ I IV E M GG ++D + K + K +
Sbjct: 189 TEIEILKKLNHPCIIK-IKNFFDAEDYYIVLELMEGGELFDKVVGNKRL-KEATCKLYFY 246
Query: 398 DVSKGMNYLHQNNIIHRDLKAANLLM---DENEVVKVADFGVARVKAQSGVMTAETGTYR 454
+ + YLH+N IIHRDLK N+L+ +E+ ++K+ DFG +++ ++ +M GT
Sbjct: 247 QMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPT 306
Query: 455 WMAPEV---IEHKPYDHKADVFSFGIVLWELLTGKLPY 489
++APEV + Y+ D +S G++L+ L+G P+
Sbjct: 307 YLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPF 344
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 78.2 bits (191), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 57/225 (25%), Positives = 112/225 (49%), Gaps = 16/225 (7%)
Query: 297 GSKVASGSYGDLYRGTYCSQDV--AIKVLKPERINSDMQ----KEFAQEVFIMRKVRHKN 350
G ++ SG + + + S + A K +K R S + ++ +EV I+++++H N
Sbjct: 15 GEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPN 74
Query: 351 VVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFK--LPSLLKVAIDVSKGMNYLHQ 408
V+ + ++ E ++GG ++D+L + + + + LK + G+ YLH
Sbjct: 75 VITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLK---QILNGVYYLHS 131
Query: 409 NNIIHRDLKAANLLMDENEV----VKVADFGVARVKAQSGVMTAETGTYRWMAPEVIEHK 464
I H DLK N+++ + V +K+ DFG+A GT ++APE++ ++
Sbjct: 132 LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYE 191
Query: 465 PYDHKADVFSFGIVLWELLTGKLPYEYLTPLQAAVGVVQKVHHSF 509
P +AD++S G++ + LL+G P+ T Q + V V++ F
Sbjct: 192 PLGLEADMWSIGVITYILLSGASPFLGDTK-QETLANVSAVNYEF 235
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 78.2 bits (191), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 57/225 (25%), Positives = 113/225 (50%), Gaps = 16/225 (7%)
Query: 297 GSKVASGSYGDLYRGTYCSQDV--AIKVLKPERINSDMQ----KEFAQEVFIMRKVRHKN 350
G ++ SG + + + S + A K +K R S + ++ +EV I+++++H N
Sbjct: 16 GEELGSGKFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPN 75
Query: 351 VVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFK--LPSLLKVAIDVSKGMNYLHQ 408
V+ + ++ E ++GG ++D+L + + + + LK ++ G+ YLH
Sbjct: 76 VITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILN---GVYYLHS 132
Query: 409 NNIIHRDLKAANLLMDENEV----VKVADFGVARVKAQSGVMTAETGTYRWMAPEVIEHK 464
I H DLK N+++ + V +K+ DFG+A GT ++APE++ ++
Sbjct: 133 LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYE 192
Query: 465 PYDHKADVFSFGIVLWELLTGKLPYEYLTPLQAAVGVVQKVHHSF 509
P +AD++S G++ + LL+G P+ T Q + V V++ F
Sbjct: 193 PLGLEADMWSIGVITYILLSGASPFLGDTK-QETLANVSAVNYEF 236
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 57/225 (25%), Positives = 112/225 (49%), Gaps = 16/225 (7%)
Query: 297 GSKVASGSYGDLYRGTYCSQDV--AIKVLKPERINSDMQ----KEFAQEVFIMRKVRHKN 350
G ++ SG + + + S + A K +K R S + ++ +EV I+++++H N
Sbjct: 16 GEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPN 75
Query: 351 VVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFK--LPSLLKVAIDVSKGMNYLHQ 408
V+ + ++ E ++GG ++D+L + + + + LK + G+ YLH
Sbjct: 76 VITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLK---QILNGVYYLHS 132
Query: 409 NNIIHRDLKAANLLMDENEV----VKVADFGVARVKAQSGVMTAETGTYRWMAPEVIEHK 464
I H DLK N+++ + V +K+ DFG+A GT ++APE++ ++
Sbjct: 133 LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYE 192
Query: 465 PYDHKADVFSFGIVLWELLTGKLPYEYLTPLQAAVGVVQKVHHSF 509
P +AD++S G++ + LL+G P+ T Q + V V++ F
Sbjct: 193 PLGLEADMWSIGVITYILLSGASPFLGDTK-QETLANVSAVNYEF 236
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 57/225 (25%), Positives = 112/225 (49%), Gaps = 16/225 (7%)
Query: 297 GSKVASGSYGDLYRGTYCSQDV--AIKVLKPERINSDMQ----KEFAQEVFIMRKVRHKN 350
G ++ SG + + + S + A K +K R S + ++ +EV I+++++H N
Sbjct: 16 GEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPN 75
Query: 351 VVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFK--LPSLLKVAIDVSKGMNYLHQ 408
V+ + ++ E ++GG ++D+L + + + + LK + G+ YLH
Sbjct: 76 VITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLK---QILNGVYYLHS 132
Query: 409 NNIIHRDLKAANLLMDENEV----VKVADFGVARVKAQSGVMTAETGTYRWMAPEVIEHK 464
I H DLK N+++ + V +K+ DFG+A GT ++APE++ ++
Sbjct: 133 LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYE 192
Query: 465 PYDHKADVFSFGIVLWELLTGKLPYEYLTPLQAAVGVVQKVHHSF 509
P +AD++S G++ + LL+G P+ T Q + V V++ F
Sbjct: 193 PLGLEADMWSIGVITYILLSGASPFLGDTK-QETLANVSAVNYEF 236
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 57/225 (25%), Positives = 112/225 (49%), Gaps = 16/225 (7%)
Query: 297 GSKVASGSYGDLYRGTYCSQDV--AIKVLKPERINSDMQ----KEFAQEVFIMRKVRHKN 350
G ++ SG + + + S + A K +K R S + ++ +EV I+++++H N
Sbjct: 16 GEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPN 75
Query: 351 VVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFK--LPSLLKVAIDVSKGMNYLHQ 408
V+ + ++ E ++GG ++D+L + + + + LK + G+ YLH
Sbjct: 76 VITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLK---QILNGVYYLHS 132
Query: 409 NNIIHRDLKAANLLMDENEV----VKVADFGVARVKAQSGVMTAETGTYRWMAPEVIEHK 464
I H DLK N+++ + V +K+ DFG+A GT ++APE++ ++
Sbjct: 133 LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYE 192
Query: 465 PYDHKADVFSFGIVLWELLTGKLPYEYLTPLQAAVGVVQKVHHSF 509
P +AD++S G++ + LL+G P+ T Q + V V++ F
Sbjct: 193 PLGLEADMWSIGVITYILLSGASPFLGDTK-QETLANVSAVNYEF 236
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 57/225 (25%), Positives = 112/225 (49%), Gaps = 16/225 (7%)
Query: 297 GSKVASGSYGDLYRGTYCSQDV--AIKVLKPERINSDMQ----KEFAQEVFIMRKVRHKN 350
G ++ SG + + + S + A K +K R S + ++ +EV I+++++H N
Sbjct: 16 GEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPN 75
Query: 351 VVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFK--LPSLLKVAIDVSKGMNYLHQ 408
V+ + ++ E ++GG ++D+L + + + + LK + G+ YLH
Sbjct: 76 VITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLK---QILNGVYYLHS 132
Query: 409 NNIIHRDLKAANLLMDENEV----VKVADFGVARVKAQSGVMTAETGTYRWMAPEVIEHK 464
I H DLK N+++ + V +K+ DFG+A GT ++APE++ ++
Sbjct: 133 LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYE 192
Query: 465 PYDHKADVFSFGIVLWELLTGKLPYEYLTPLQAAVGVVQKVHHSF 509
P +AD++S G++ + LL+G P+ T Q + V V++ F
Sbjct: 193 PLGLEADMWSIGVITYILLSGASPFLGDTK-QETLANVSAVNYEF 236
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 57/225 (25%), Positives = 113/225 (50%), Gaps = 16/225 (7%)
Query: 297 GSKVASGSYGDLYRGTYCSQDV--AIKVLKPERINSDMQ----KEFAQEVFIMRKVRHKN 350
G ++ SG + + + S + A K +K R S + ++ +EV I+++++H N
Sbjct: 16 GEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPN 75
Query: 351 VVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFK--LPSLLKVAIDVSKGMNYLHQ 408
V+ + ++ E ++GG ++D+L + + + + LK ++ G+ YLH
Sbjct: 76 VITLHEVYENKTDVILIGELVAGGELFDFLAEKESLTEEEATEFLKQILN---GVYYLHS 132
Query: 409 NNIIHRDLKAANLLMDENEV----VKVADFGVARVKAQSGVMTAETGTYRWMAPEVIEHK 464
I H DLK N+++ + V +K+ DFG+A GT ++APE++ ++
Sbjct: 133 LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYE 192
Query: 465 PYDHKADVFSFGIVLWELLTGKLPYEYLTPLQAAVGVVQKVHHSF 509
P +AD++S G++ + LL+G P+ T Q + V V++ F
Sbjct: 193 PLGLEADMWSIGVITYILLSGASPFLGDTK-QETLANVSAVNYEF 236
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 94/202 (46%), Gaps = 20/202 (9%)
Query: 300 VASGSYGDLYRG--TYCSQDVAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQFIGA 357
+ SG+ G + ++VAIK L N K +E+ +M+ V HKN++ +
Sbjct: 32 IGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKXVNHKNIISLLNV 91
Query: 358 CTKPPSL------CIVTEFMSGGSVYDYLHKLKGVFKLP----SLLKVAIDVSKGMNYLH 407
T +L +V E M L V ++ + + + G+ +LH
Sbjct: 92 FTPQKTLEEFQDVYLVMELMDAN--------LXQVIQMELDHERMSYLLYQMLXGIKHLH 143
Query: 408 QNNIIHRDLKAANLLMDENEVVKVADFGVARVKAQSGVMTAETGTYRWMAPEVIEHKPYD 467
IIHRDLK +N+++ + +K+ DFG+AR S +MT T + APEVI Y
Sbjct: 144 SAGIIHRDLKPSNIVVKSDXTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYK 203
Query: 468 HKADVFSFGIVLWELLTGKLPY 489
D++S G ++ E++ K+ +
Sbjct: 204 ENVDIWSVGCIMGEMVRHKILF 225
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 103/215 (47%), Gaps = 25/215 (11%)
Query: 286 VWEIDPKHLKFGSKVASGSYGDLYRG--TYCSQDVAIKVLKPERINSDMQKEFAQEVFIM 343
+WE+ P+ + S V SG+YG + T VA+K L + K +E+ ++
Sbjct: 17 IWEV-PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL 75
Query: 344 RKVRHKNVVQFIGACTKPPSL------CIVTEFMSGGSVYDYLHKLKGVFKLPSLLK--- 394
+ ++H+NV+ + T SL +VT M L + K L
Sbjct: 76 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGA--------DLNNIVKCQKLTDDHV 127
Query: 395 --VAIDVSKGMNYLHQNNIIHRDLKAANLLMDENEVVKVADFGVARVKAQSGVMTAETGT 452
+ + +G+ Y+H +IIHRDLK +NL ++E+ +K+ D G+AR MT T
Sbjct: 128 QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDGGLAR--HTDDEMTGYVAT 185
Query: 453 YRWMAPEV-IEHKPYDHKADVFSFGIVLWELLTGK 486
+ APE+ + Y+ D++S G ++ ELLTG+
Sbjct: 186 RWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 103/215 (47%), Gaps = 25/215 (11%)
Query: 286 VWEIDPKHLKFGSKVASGSYGDLYRG--TYCSQDVAIKVLKPERINSDMQKEFAQEVFIM 343
+WE+ P+ + S V SG+YG + T VA+K L + K +E+ ++
Sbjct: 17 IWEV-PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL 75
Query: 344 RKVRHKNVVQFIGACTKPPSL------CIVTEFMSGGSVYDYLHKLKGVFKLPSLLK--- 394
+ ++H+NV+ + T SL +VT M L + K L
Sbjct: 76 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGA--------DLNNIVKCQKLTDDHV 127
Query: 395 --VAIDVSKGMNYLHQNNIIHRDLKAANLLMDENEVVKVADFGVARVKAQSGVMTAETGT 452
+ + +G+ Y+H +IIHRDLK +NL ++E+ +K+ D G+AR MT T
Sbjct: 128 QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDRGLAR--HTDDEMTGYVAT 185
Query: 453 YRWMAPEV-IEHKPYDHKADVFSFGIVLWELLTGK 486
+ APE+ + Y+ D++S G ++ ELLTG+
Sbjct: 186 RWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 57/225 (25%), Positives = 113/225 (50%), Gaps = 16/225 (7%)
Query: 297 GSKVASGSYGDLYRGTYCSQDV--AIKVLKPERINSDMQ----KEFAQEVFIMRKVRHKN 350
G ++ SG + + + S + A K +K R S + ++ +EV I+++++H N
Sbjct: 16 GEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPN 75
Query: 351 VVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFK--LPSLLKVAIDVSKGMNYLHQ 408
V+ + ++ E ++GG ++D+L + + + + LK ++ G+ YLH
Sbjct: 76 VITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILN---GVYYLHS 132
Query: 409 NNIIHRDLKAANLLMDENEV----VKVADFGVARVKAQSGVMTAETGTYRWMAPEVIEHK 464
I H DLK N+++ + V +K+ DFG+A GT ++APE++ ++
Sbjct: 133 LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYE 192
Query: 465 PYDHKADVFSFGIVLWELLTGKLPYEYLTPLQAAVGVVQKVHHSF 509
P +AD++S G++ + LL+G P+ T Q + V V++ F
Sbjct: 193 PLGLEADMWSIGVITYILLSGASPFLGDTK-QETLANVSAVNYEF 236
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 53/184 (28%), Positives = 91/184 (49%), Gaps = 18/184 (9%)
Query: 316 QDVAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQFIGACTKPPSLCIVTEFMSGGS 375
++VAIK L N K +E+ +M+ V HKN++ + T +L EF
Sbjct: 50 RNVAIKKLSRPFQNQTHAKRAYRELVLMKXVNHKNIISLLNVFTPQKTL---EEFQD--- 103
Query: 376 VYDYLHKLKGVFKLPSLLKVAIDVSK----------GMNYLHQNNIIHRDLKAANLLMDE 425
VY + + L ++++ +D + G+ +LH IIHRDLK +N+++
Sbjct: 104 VYLVMELMDA--NLXQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKS 161
Query: 426 NEVVKVADFGVARVKAQSGVMTAETGTYRWMAPEVIEHKPYDHKADVFSFGIVLWELLTG 485
+ +K+ DFG+AR S +MT T + APEVI Y D++S G ++ E++
Sbjct: 162 DXTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRH 221
Query: 486 KLPY 489
K+ +
Sbjct: 222 KILF 225
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 93/176 (52%), Gaps = 4/176 (2%)
Query: 317 DVAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQFIGACTKPPSLCIVTEFMSGGSV 376
+ A K++ +++++ ++ +E I RK++H N+V+ + + +V + ++GG +
Sbjct: 33 EFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGEL 92
Query: 377 YDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDLKAANLLMD---ENEVVKVAD 433
++ + + + + + + Y H N I+HR+LK NLL+ + VK+AD
Sbjct: 93 FEDI-VAREFYSEADASHCIQQILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLAD 151
Query: 434 FGVARVKAQSGVMTAETGTYRWMAPEVIEHKPYDHKADVFSFGIVLWELLTGKLPY 489
FG+A S GT +++PEV++ PY D+++ G++L+ LL G P+
Sbjct: 152 FGLAIEVNDSEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPF 207
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 98/199 (49%), Gaps = 12/199 (6%)
Query: 300 VASGSYGDLYRG--TYCSQDVAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQFIGA 357
+ SG+ G + T +VA+K L N K +E+ +++ V HKN++ +
Sbjct: 30 IGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNIISLLNV 89
Query: 358 CTKPPSL------CIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNI 411
T +L +V E M ++ +H ++ LL + G+ +LH I
Sbjct: 90 FTPQKTLEEFQDVYLVMELMDA-NLCQVIHMELDHERMSYLL---YQMLCGIKHLHSAGI 145
Query: 412 IHRDLKAANLLMDENEVVKVADFGVARVKAQSGVMTAETGTYRWMAPEVIEHKPYDHKAD 471
IHRDLK +N+++ + +K+ DFG+AR + + +MT T + APEVI Y D
Sbjct: 146 IHRDLKPSNIVVKSDCTLKILDFGLARTASTNFMMTPYVVTRYYRAPEVILGMGYKENVD 205
Query: 472 VFSFGIVLWELLTGKLPYE 490
++S G ++ EL+ G + ++
Sbjct: 206 IWSVGCIMGELVKGSVIFQ 224
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 93/176 (52%), Gaps = 4/176 (2%)
Query: 317 DVAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQFIGACTKPPSLCIVTEFMSGGSV 376
+ A K++ +++++ ++ +E I RK++H N+V+ + + +V + ++GG +
Sbjct: 56 EFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGEL 115
Query: 377 YDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDLKAANLLMD---ENEVVKVAD 433
++ + + + + + + Y H N I+HR+LK NLL+ + VK+AD
Sbjct: 116 FEDI-VAREFYSEADASHCIQQILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLAD 174
Query: 434 FGVARVKAQSGVMTAETGTYRWMAPEVIEHKPYDHKADVFSFGIVLWELLTGKLPY 489
FG+A S GT +++PEV++ PY D+++ G++L+ LL G P+
Sbjct: 175 FGLAIEVNDSEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPF 230
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 57/225 (25%), Positives = 113/225 (50%), Gaps = 16/225 (7%)
Query: 297 GSKVASGSYGDLYRGTYCSQDV--AIKVLKPERINSDMQ----KEFAQEVFIMRKVRHKN 350
G ++ SG + + + S + A K +K R S + ++ +EV I+++++H N
Sbjct: 16 GEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPN 75
Query: 351 VVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFK--LPSLLKVAIDVSKGMNYLHQ 408
V+ + ++ E ++GG ++D+L + + + + LK ++ G+ YLH
Sbjct: 76 VITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILN---GVYYLHS 132
Query: 409 NNIIHRDLKAANLLMDENEV----VKVADFGVARVKAQSGVMTAETGTYRWMAPEVIEHK 464
I H DLK N+++ + V +K+ DFG+A GT ++APE++ ++
Sbjct: 133 LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPAFVAPEIVNYE 192
Query: 465 PYDHKADVFSFGIVLWELLTGKLPYEYLTPLQAAVGVVQKVHHSF 509
P +AD++S G++ + LL+G P+ T Q + V V++ F
Sbjct: 193 PLGLEADMWSIGVITYILLSGASPFLGDTK-QETLANVSAVNYEF 236
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 53/184 (28%), Positives = 91/184 (49%), Gaps = 18/184 (9%)
Query: 316 QDVAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQFIGACTKPPSLCIVTEFMSGGS 375
++VAIK L N K +E+ +M+ V HKN++ + T +L EF
Sbjct: 50 RNVAIKKLSRPFQNQTHAKRAYRELVLMKXVNHKNIISLLNVFTPQKTL---EEFQD--- 103
Query: 376 VYDYLHKLKGVFKLPSLLKVAIDVSK----------GMNYLHQNNIIHRDLKAANLLMDE 425
VY + + L ++++ +D + G+ +LH IIHRDLK +N+++
Sbjct: 104 VYLVMELMDA--NLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKS 161
Query: 426 NEVVKVADFGVARVKAQSGVMTAETGTYRWMAPEVIEHKPYDHKADVFSFGIVLWELLTG 485
+ +K+ DFG+AR S +MT T + APEVI Y D++S G ++ E++
Sbjct: 162 DXTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRH 221
Query: 486 KLPY 489
K+ +
Sbjct: 222 KILF 225
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 93/176 (52%), Gaps = 4/176 (2%)
Query: 317 DVAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQFIGACTKPPSLCIVTEFMSGGSV 376
+ A K++ +++++ ++ +E I RK++H N+V+ + + +V + ++GG +
Sbjct: 33 EFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGEL 92
Query: 377 YDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDLKAANLLMD---ENEVVKVAD 433
++ + + + + + + Y H N I+HR+LK NLL+ + VK+AD
Sbjct: 93 FEDI-VAREFYSEADASHCIQQILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLAD 151
Query: 434 FGVARVKAQSGVMTAETGTYRWMAPEVIEHKPYDHKADVFSFGIVLWELLTGKLPY 489
FG+A S GT +++PEV++ PY D+++ G++L+ LL G P+
Sbjct: 152 FGLAIEVNDSEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPF 207
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 52/180 (28%), Positives = 87/180 (48%), Gaps = 10/180 (5%)
Query: 316 QDVAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQFIGACTKPPSL------CIVTE 369
++VAIK L N K +E+ +M+ V HKN++ + T SL IV E
Sbjct: 50 RNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVME 109
Query: 370 FMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDLKAANLLMDENEVV 429
M + ++ + + + G+ +LH IIHRDLK +N+++ + +
Sbjct: 110 LMDA----NLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTL 165
Query: 430 KVADFGVARVKAQSGVMTAETGTYRWMAPEVIEHKPYDHKADVFSFGIVLWELLTGKLPY 489
K+ DFG+AR S +M E T + APEVI Y D++S G ++ E++ K+ +
Sbjct: 166 KILDFGLARTAGTSFMMEPEVVTRYYRAPEVILGMGYKENVDLWSVGCIMGEMVCHKILF 225
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 93/176 (52%), Gaps = 4/176 (2%)
Query: 317 DVAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQFIGACTKPPSLCIVTEFMSGGSV 376
+ A K++ +++++ ++ +E I RK++H N+V+ + + +V + ++GG +
Sbjct: 32 EFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGEL 91
Query: 377 YDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDLKAANLLMD---ENEVVKVAD 433
++ + + + + + + Y H N I+HR+LK NLL+ + VK+AD
Sbjct: 92 FEDI-VAREFYSEADASHCIQQILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLAD 150
Query: 434 FGVARVKAQSGVMTAETGTYRWMAPEVIEHKPYDHKADVFSFGIVLWELLTGKLPY 489
FG+A S GT +++PEV++ PY D+++ G++L+ LL G P+
Sbjct: 151 FGLAIEVNDSEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPF 206
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 101/203 (49%), Gaps = 6/203 (2%)
Query: 289 IDPKHLKFGSKVASGSYGDLY--RGTYCSQDVAIKVLKPERINSDMQKEFAQEVFIMRKV 346
+D ++ + K+ G+YG +Y R + VA+K ++ + + +E+ +++++
Sbjct: 4 VDMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL 63
Query: 347 RHKNVVQFIGACTKPPSLCIVTEFMSGG-SVYDYLHKLKGVFKLPSLLKVAIDVSKGMNY 405
H N+V+ + L +V EF+ + L G+ LP + + +G+ +
Sbjct: 64 NHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGI-PLPLIKSYLFQLLQGLAF 122
Query: 406 LHQNNIIHRDLKAANLLMDENEVVKVADFGVARV-KAQSGVMTAETGTYRWMAPEV-IEH 463
H + ++HRDLK NLL++ +K+ADFG+AR T E T + APE+ +
Sbjct: 123 CHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGC 182
Query: 464 KPYDHKADVFSFGIVLWELLTGK 486
K Y D++S G + E++T +
Sbjct: 183 KYYSTAVDIWSLGCIFAEMVTRR 205
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 57/225 (25%), Positives = 112/225 (49%), Gaps = 16/225 (7%)
Query: 297 GSKVASGSYGDLYRGTYCSQDV--AIKVLKPERINSDMQ----KEFAQEVFIMRKVRHKN 350
G ++ SG + + + S + A K +K R S + ++ +EV I+++++H N
Sbjct: 16 GEELGSGVFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPN 75
Query: 351 VVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFK--LPSLLKVAIDVSKGMNYLHQ 408
V+ + ++ E ++GG ++D+L + + + + LK + G+ YLH
Sbjct: 76 VITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLK---QILNGVYYLHS 132
Query: 409 NNIIHRDLKAANLLMDENEV----VKVADFGVARVKAQSGVMTAETGTYRWMAPEVIEHK 464
I H DLK N+++ + V +K+ DFG+A GT ++APE++ ++
Sbjct: 133 LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYE 192
Query: 465 PYDHKADVFSFGIVLWELLTGKLPYEYLTPLQAAVGVVQKVHHSF 509
P +AD++S G++ + LL+G P+ T Q + V V++ F
Sbjct: 193 PLGLEADMWSIGVITYILLSGASPFLGDTK-QETLANVSAVNYEF 236
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 51/193 (26%), Positives = 97/193 (50%), Gaps = 6/193 (3%)
Query: 299 KVASGSYGDLY--RGTYCSQDVAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQFIG 356
K+ G+YG +Y R + VA+K ++ + + +E+ +++++ H N+V+ +
Sbjct: 10 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLD 69
Query: 357 ACTKPPSLCIVTEFMSGG-SVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRD 415
L +V EF+ + L G+ LP + + +G+++ H + ++HRD
Sbjct: 70 VIHTENKLYLVFEFLHQDLKKFMDASALTGI-PLPLIKSYLFQLLQGLSFCHSHRVLHRD 128
Query: 416 LKAANLLMDENEVVKVADFGVARV-KAQSGVMTAETGTYRWMAPEV-IEHKPYDHKADVF 473
LK NLL++ +K+ADFG+AR T E T + APE+ + K Y D++
Sbjct: 129 LKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIW 188
Query: 474 SFGIVLWELLTGK 486
S G + E++T +
Sbjct: 189 SLGCIFAEMVTRR 201
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 52/180 (28%), Positives = 87/180 (48%), Gaps = 10/180 (5%)
Query: 316 QDVAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQFIGACTKPPSL------CIVTE 369
++VAIK L N K +E+ +M+ V HKN++ + T SL IV E
Sbjct: 55 RNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVME 114
Query: 370 FMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDLKAANLLMDENEVV 429
M + ++ + + + G+ +LH IIHRDLK +N+++ + +
Sbjct: 115 LMDA----NLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTL 170
Query: 430 KVADFGVARVKAQSGVMTAETGTYRWMAPEVIEHKPYDHKADVFSFGIVLWELLTGKLPY 489
K+ DFG+AR S +MT T + APEVI Y D++S G ++ E++ K+ +
Sbjct: 171 KILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDLWSVGCIMGEMVCHKILF 230
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 52/180 (28%), Positives = 87/180 (48%), Gaps = 10/180 (5%)
Query: 316 QDVAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQFIGACTKPPSL------CIVTE 369
++VAIK L N K +E+ +M+ V HKN++ + T SL IV E
Sbjct: 44 RNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVME 103
Query: 370 FMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDLKAANLLMDENEVV 429
M + ++ + + + G+ +LH IIHRDLK +N+++ + +
Sbjct: 104 LMDA----NLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTL 159
Query: 430 KVADFGVARVKAQSGVMTAETGTYRWMAPEVIEHKPYDHKADVFSFGIVLWELLTGKLPY 489
K+ DFG+AR S +MT T + APEVI Y D++S G ++ E++ K+ +
Sbjct: 160 KILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDLWSVGCIMGEMVCHKILF 219
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 97/202 (48%), Gaps = 20/202 (9%)
Query: 300 VASGSYGDLYRG--TYCSQDVAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQFIGA 357
+ SG+ G + ++VAIK L N K +E+ +M+ V HKN++ +
Sbjct: 32 IGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNV 91
Query: 358 CTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAID----------VSKGMNYLH 407
T +L EF VY + + L ++++ +D + G+ +LH
Sbjct: 92 FTPQKTL---EEFQD---VYLVMELMDA--NLXQVIQMELDHERMSYLLYQMLXGIKHLH 143
Query: 408 QNNIIHRDLKAANLLMDENEVVKVADFGVARVKAQSGVMTAETGTYRWMAPEVIEHKPYD 467
IIHRDLK +N+++ + +K+ DFG+AR S +MT T + APEVI Y
Sbjct: 144 SAGIIHRDLKPSNIVVKSDXTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYK 203
Query: 468 HKADVFSFGIVLWELLTGKLPY 489
D++S G ++ E++ K+ +
Sbjct: 204 ENVDIWSVGCIMGEMVRHKILF 225
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 51/191 (26%), Positives = 95/191 (49%), Gaps = 6/191 (3%)
Query: 299 KVASGSYGDLY--RGTYCSQDVAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQFIG 356
K+ G+YG +Y R + VA+K ++ + + +E+ +++++ H N+V+ +
Sbjct: 17 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLD 76
Query: 357 ACTKPPSLCIVTEFMSGG-SVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRD 415
L +V EF+ + L G+ LP + + +G+ + H + ++HRD
Sbjct: 77 VIHTENKLYLVFEFLHQDLKKFMDASALTGI-PLPLIKSYLFQLLQGLAFCHSHRVLHRD 135
Query: 416 LKAANLLMDENEVVKVADFGVARV-KAQSGVMTAETGTYRWMAPEV-IEHKPYDHKADVF 473
LK NLL++ +K+ADFG+AR T E T + APE+ + K Y D++
Sbjct: 136 LKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGXKYYSTAVDIW 195
Query: 474 SFGIVLWELLT 484
S G + E++T
Sbjct: 196 SLGCIFAEMVT 206
>pdb|3KVW|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2) In Complex
With An Indirubin Ligand
Length = 429
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/198 (30%), Positives = 104/198 (52%), Gaps = 19/198 (9%)
Query: 300 VASGSYGDLYRGT--YCSQDVAIKVLKPERINSDMQKEFAQEVFIMRKVRHK------NV 351
+ GS+G + + Q VA+K+++ E+ ++ A+E+ I+ +R + NV
Sbjct: 105 IGKGSFGQVVKAYDHKVHQHVALKMVRNEK---RFHRQAAEEIRILEHLRKQDKDNTMNV 161
Query: 352 VQFIGACTKPPSLCIVTEFMSGGSVYDYL--HKLKGVFKLPSLLKVAIDVSKGMNYLHQN 409
+ + T +C+ E +S ++Y+ + +K +G F LP + K A + + ++ LH+N
Sbjct: 162 IHMLENFTFRNHICMTFELLSM-NLYELIKKNKFQG-FSLPLVRKFAHSILQCLDALHKN 219
Query: 410 NIIHRDLKAANLLMDEN--EVVKVADFGVARVKAQSGVMTAETGTYRWMAPEVIEHKPYD 467
IIH DLK N+L+ + +KV DFG + + Q ++ YR APEVI Y
Sbjct: 220 RIIHCDLKPENILLKQQGRSGIKVIDFGSSCYEHQRVYTXIQSRFYR--APEVILGARYG 277
Query: 468 HKADVFSFGIVLWELLTG 485
D++S G +L ELLTG
Sbjct: 278 MPIDMWSLGCILAELLTG 295
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 51/147 (34%), Positives = 78/147 (53%), Gaps = 9/147 (6%)
Query: 351 VVQFIGACTKPPSLCIVTEFMSGGSVYDYLHK-LKGVFKLPSLLKVAIDVSKGMNYL-HQ 408
+VQ G + I E M G+ + L K ++G L K+ + + K + YL +
Sbjct: 86 IVQCFGTFITNTDVFIAMELM--GTCAEKLKKRMQGPIPERILGKMTVAIVKALYYLKEK 143
Query: 409 NNIIHRDLKAANLLMDENEVVKVADFGVARVKAQSGVMTAETGTYRWMAPEVIE----HK 464
+ +IHRD+K +N+L+DE +K+ DFG++ G +MAPE I+ K
Sbjct: 144 HGVIHRDVKPSNILLDERGQIKLCDFGISGRLVDDKAKDRSAGCAAYMAPERIDPPDPTK 203
Query: 465 P-YDHKADVFSFGIVLWELLTGKLPYE 490
P YD +ADV+S GI L EL TG+ PY+
Sbjct: 204 PDYDIRADVWSLGISLVELATGQFPYK 230
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 96/200 (48%), Gaps = 20/200 (10%)
Query: 300 VASGSYGDLYRG--TYCSQDVAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQFIGA 357
+ SG+ G + ++VAIK L N K +E+ +M+ V HKN++ +
Sbjct: 25 IGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNV 84
Query: 358 CTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAID----------VSKGMNYLH 407
T +L EF VY + + L ++++ +D + G+ +LH
Sbjct: 85 FTPQKTL---EEFQD---VYLVMELMDA--NLXQVIQMELDHERMSYLLYQMLXGIKHLH 136
Query: 408 QNNIIHRDLKAANLLMDENEVVKVADFGVARVKAQSGVMTAETGTYRWMAPEVIEHKPYD 467
IIHRDLK +N+++ + +K+ DFG+AR S +MT T + APEVI Y
Sbjct: 137 SAGIIHRDLKPSNIVVKSDXTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYK 196
Query: 468 HKADVFSFGIVLWELLTGKL 487
D++S G ++ E++ K+
Sbjct: 197 ENVDIWSVGCIMGEMVRHKI 216
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 53/184 (28%), Positives = 91/184 (49%), Gaps = 18/184 (9%)
Query: 316 QDVAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQFIGACTKPPSLCIVTEFMSGGS 375
++VAIK L N K +E+ +M+ V HKN++ + T +L EF
Sbjct: 88 RNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTL---EEFQD--- 141
Query: 376 VYDYLHKLKGVFKLPSLLKVAIDVSK----------GMNYLHQNNIIHRDLKAANLLMDE 425
VY + + L ++++ +D + G+ +LH IIHRDLK +N+++
Sbjct: 142 VYLVMELMDA--NLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKS 199
Query: 426 NEVVKVADFGVARVKAQSGVMTAETGTYRWMAPEVIEHKPYDHKADVFSFGIVLWELLTG 485
+ +K+ DFG+AR S +MT T + APEVI Y D++S G ++ E++
Sbjct: 200 DCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRH 259
Query: 486 KLPY 489
K+ +
Sbjct: 260 KILF 263
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 51/193 (26%), Positives = 96/193 (49%), Gaps = 6/193 (3%)
Query: 299 KVASGSYGDLY--RGTYCSQDVAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQFIG 356
K+ G+YG +Y R + VA+K ++ + + +E+ +++++ H N+V+ +
Sbjct: 10 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLD 69
Query: 357 ACTKPPSLCIVTEFMSGG-SVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRD 415
L +V EF+ + L G+ LP + + +G+ + H + ++HRD
Sbjct: 70 VIHTENKLYLVFEFLHQDLKKFMDASALTGI-PLPLIKSYLFQLLQGLAFCHSHRVLHRD 128
Query: 416 LKAANLLMDENEVVKVADFGVARV-KAQSGVMTAETGTYRWMAPEV-IEHKPYDHKADVF 473
LK NLL++ +K+ADFG+AR T E T + APE+ + K Y D++
Sbjct: 129 LKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGXKYYSTAVDIW 188
Query: 474 SFGIVLWELLTGK 486
S G + E++T +
Sbjct: 189 SLGCIFAEMVTRR 201
>pdb|4FVR|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain Mutant
V617f (Mg- Atp-Bound Form)
Length = 289
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 97/198 (48%), Gaps = 19/198 (9%)
Query: 297 GSKVASGSYGDLYRGTYCSQDVAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQFIG 356
G + G YG L+ +V +KVL ++ + + + F + +M K+ HK++V G
Sbjct: 27 GVRREVGDYGQLHE-----TEVLLKVL--DKAHRNYSESFFEAASMMSKLSHKHLVLNYG 79
Query: 357 ACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDL 416
C +V EF+ GS+ YL K K + L+VA ++ M++L +N +IH ++
Sbjct: 80 VCFCGDENILVQEFVKFGSLDTYLKKNKNCINILWKLEVAKQLAWAMHFLEENTLIHGNV 139
Query: 417 KAANLLMDENE--------VVKVADFGVARVKAQSGVMTAETGTYRWMAPEVIEH-KPYD 467
A N+L+ E +K++D G++ ++ W+ PE IE+ K +
Sbjct: 140 CAKNILLIREEDRKTGNPPFIKLSDPGISITVLPKDILQERIP---WVPPECIENPKNLN 196
Query: 468 HKADVFSFGIVLWELLTG 485
D +SFG LWE+ +G
Sbjct: 197 LATDKWSFGTTLWEICSG 214
>pdb|4AZF|A Chain A, Human Dyrk2 In Complex With Leucettine L41
Length = 417
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/198 (30%), Positives = 104/198 (52%), Gaps = 19/198 (9%)
Query: 300 VASGSYGDLYRGT--YCSQDVAIKVLKPERINSDMQKEFAQEVFIMRKVRHK------NV 351
+ GS+G + + Q VA+K+++ E+ ++ A+E+ I+ +R + NV
Sbjct: 105 IGKGSFGQVVKAYDHKVHQHVALKMVRNEK---RFHRQAAEEIRILEHLRKQDKDNTMNV 161
Query: 352 VQFIGACTKPPSLCIVTEFMSGGSVYDYL--HKLKGVFKLPSLLKVAIDVSKGMNYLHQN 409
+ + T +C+ E +S ++Y+ + +K +G F LP + K A + + ++ LH+N
Sbjct: 162 IHMLENFTFRNHICMTFELLSM-NLYELIKKNKFQG-FSLPLVRKFAHSILQCLDALHKN 219
Query: 410 NIIHRDLKAANLLMDEN--EVVKVADFGVARVKAQSGVMTAETGTYRWMAPEVIEHKPYD 467
IIH DLK N+L+ + +KV DFG + + Q ++ YR APEVI Y
Sbjct: 220 RIIHCDLKPENILLKQQGRSGIKVIDFGSSCYEHQRVYTXIQSRFYR--APEVILGARYG 277
Query: 468 HKADVFSFGIVLWELLTG 485
D++S G +L ELLTG
Sbjct: 278 MPIDMWSLGCILAELLTG 295
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 80/154 (51%), Gaps = 16/154 (10%)
Query: 346 VRHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNY 405
+ +N V+ + A K +L I E+ G++YD +H + ++ + + ++Y
Sbjct: 72 LERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSENLNQQRDEYWRLFRQILEALSY 131
Query: 406 LHQNNIIHRDLKAANLLMDENEVVKVADFGVAR---------------VKAQSGVMTAET 450
+H IIHRDLK N+ +DE+ VK+ DFG+A+ + S +T+
Sbjct: 132 IHSQGIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSDNLTSAI 191
Query: 451 GTYRWMAPEVIEHKP-YDHKADVFSFGIVLWELL 483
GT ++A EV++ Y+ K D++S GI+ +E++
Sbjct: 192 GTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMI 225
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 100/204 (49%), Gaps = 15/204 (7%)
Query: 300 VASGSYGDLYRGTYCSQDVAIKVLKPERINSDMQKE---FAQEVFIMRKVRHKNVVQFIG 356
+ +GSYG + S D I V K S + E EV ++R+++H N+V++
Sbjct: 14 IGTGSYGRCQKIRRKS-DGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYD 72
Query: 357 ACT--KPPSLCIVTEFMSGG---SVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNN- 410
+L IV E+ GG SV K + +L+V ++ + H+ +
Sbjct: 73 RIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSD 132
Query: 411 ----IIHRDLKAANLLMDENEVVKVADFGVARV-KAQSGVMTAETGTYRWMAPEVIEHKP 465
++HRDLK AN+ +D + VK+ DFG+AR+ + A GT +M+PE +
Sbjct: 133 GGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSFAKAFVGTPYYMSPEQMNRMS 192
Query: 466 YDHKADVFSFGIVLWELLTGKLPY 489
Y+ K+D++S G +L+EL P+
Sbjct: 193 YNEKSDIWSLGCLLYELCALMPPF 216
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 51/194 (26%), Positives = 98/194 (50%), Gaps = 8/194 (4%)
Query: 299 KVASGSYGDLY--RGTYCSQDVAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQFIG 356
K+ G+YG +Y R + VA+K ++ + + +E+ +++++ H N+V+ +
Sbjct: 10 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLD 69
Query: 357 ACTKPPSLCIVTEFMSGGSVYDYL--HKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHR 414
L +V EF+ + D++ L G+ LP + + +G+ + H + ++HR
Sbjct: 70 VIHTENKLYLVFEFLHQ-DLKDFMDASALTGI-PLPLIKSYLFQLLQGLAFCHSHRVLHR 127
Query: 415 DLKAANLLMDENEVVKVADFGVARV-KAQSGVMTAETGTYRWMAPEV-IEHKPYDHKADV 472
DLK NLL++ +K+ADFG+AR E T + APE+ + K Y D+
Sbjct: 128 DLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDI 187
Query: 473 FSFGIVLWELLTGK 486
+S G + E++T +
Sbjct: 188 WSLGCIFAEMVTRR 201
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 51/191 (26%), Positives = 95/191 (49%), Gaps = 6/191 (3%)
Query: 299 KVASGSYGDLY--RGTYCSQDVAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQFIG 356
K+ G+YG +Y R + VA+K ++ + + +E+ +++++ H N+V+ +
Sbjct: 17 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLD 76
Query: 357 ACTKPPSLCIVTEFMSGG-SVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRD 415
L +V EF+ + L G+ LP + + +G+ + H + ++HRD
Sbjct: 77 VIHTENKLYLVFEFLHQDLKKFMDASALTGI-PLPLIKSYLFQLLQGLAFCHSHRVLHRD 135
Query: 416 LKAANLLMDENEVVKVADFGVARV-KAQSGVMTAETGTYRWMAPEV-IEHKPYDHKADVF 473
LK NLL++ +K+ADFG+AR T E T + APE+ + K Y D++
Sbjct: 136 LKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIW 195
Query: 474 SFGIVLWELLT 484
S G + E++T
Sbjct: 196 SLGCIFAEMVT 206
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 101/208 (48%), Gaps = 7/208 (3%)
Query: 288 EIDPKHLKFGSKVASGSYGD--LYRGTYCSQDVAIKVLKPER-INSDMQKEFAQEVFIMR 344
+++ H + + GS+G + + + A+K + ++ + + + +E+ IM+
Sbjct: 11 DVNFDHFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQ 70
Query: 345 KVRHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMN 404
+ H +V + + +V + + GG + +L + FK ++ ++ ++
Sbjct: 71 GLEHPFLVNLWYSFQDEEDMFMVVDLLLGGDLRYHLQQ-NVHFKEETVKLFICELVMALD 129
Query: 405 YLHQNNIIHRDLKAANLLMDENEVVKVADFGVARVKAQSGVMTAETGTYRWMAPEVIEHK 464
YL IIHRD+K N+L+DE+ V + DF +A + + +T GT +MAPE+ +
Sbjct: 130 YLQNQRIIHRDMKPDNILLDEHGHVHITDFNIAAMLPRETQITTMAGTKPYMAPEMFSSR 189
Query: 465 P---YDHKADVFSFGIVLWELLTGKLPY 489
Y D +S G+ +ELL G+ PY
Sbjct: 190 KGAGYSFAVDWWSLGVTAYELLRGRRPY 217
>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|B Chain B, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|D Chain D, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
Length = 294
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 96/203 (47%), Gaps = 25/203 (12%)
Query: 300 VASGSYGDLYRGTYCSQDVAIKVLKPERINSDMQK----------EFAQEVFIMRKVRHK 349
+ GS+G+ V I V K RI +K F QE+ IM+ + H
Sbjct: 34 IGRGSWGE----------VKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHP 83
Query: 350 NVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQN 409
N+++ + +V E +GG +++ + K VF+ ++ DV + Y H+
Sbjct: 84 NIIRLYETFEDNTDIYLVMELCTGGELFERVVH-KRVFRESDAARIMKDVLSAVAYCHKL 142
Query: 410 NIIHRDLKAANLLM---DENEVVKVADFGVARVKAQSGVMTAETGTYRWMAPEVIEHKPY 466
N+ HRDLK N L + +K+ DFG+A +M + GT +++P+V+E Y
Sbjct: 143 NVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKMMRTKVGTPYYVSPQVLEGL-Y 201
Query: 467 DHKADVFSFGIVLWELLTGKLPY 489
+ D +S G++++ LL G P+
Sbjct: 202 GPECDEWSAGVMMYVLLCGYPPF 224
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 54/194 (27%), Positives = 90/194 (46%), Gaps = 12/194 (6%)
Query: 300 VASGSYGDLYRG--TYCSQDVAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQFIGA 357
+ SG+ G + ++VAIK L N K +E+ +M+ V HKN++ +
Sbjct: 34 IGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNV 93
Query: 358 CTKPPSL------CIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNI 411
T SL IV E M + ++ + + + G+ +LH I
Sbjct: 94 FTPQKSLEEFQDVYIVMELMDA----NLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGI 149
Query: 412 IHRDLKAANLLMDENEVVKVADFGVARVKAQSGVMTAETGTYRWMAPEVIEHKPYDHKAD 471
IHRDLK +N+++ + +K+ DFG+AR S +M T + APEVI Y D
Sbjct: 150 IHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMVPFVVTRYYRAPEVILGMGYKENVD 209
Query: 472 VFSFGIVLWELLTG 485
++S G ++ E++ G
Sbjct: 210 IWSVGCIMGEMIKG 223
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 51/191 (26%), Positives = 95/191 (49%), Gaps = 6/191 (3%)
Query: 299 KVASGSYGDLY--RGTYCSQDVAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQFIG 356
K+ G+YG +Y R + VA+K ++ + + +E+ +++++ H N+V+ +
Sbjct: 11 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLD 70
Query: 357 ACTKPPSLCIVTEFMSGG-SVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRD 415
L +V EF+ + L G+ LP + + +G+ + H + ++HRD
Sbjct: 71 VIHTENKLYLVFEFLHQDLKKFMDASALTGI-PLPLIKSYLFQLLQGLAFCHSHRVLHRD 129
Query: 416 LKAANLLMDENEVVKVADFGVARV-KAQSGVMTAETGTYRWMAPEV-IEHKPYDHKADVF 473
LK NLL++ +K+ADFG+AR T E T + APE+ + K Y D++
Sbjct: 130 LKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIW 189
Query: 474 SFGIVLWELLT 484
S G + E++T
Sbjct: 190 SLGCIFAEMVT 200
>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium
Dependent Protein Kinase Cgd7_1840 In Presence Of
Indirubin E804
Length = 277
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 96/203 (47%), Gaps = 25/203 (12%)
Query: 300 VASGSYGDLYRGTYCSQDVAIKVLKPERINSDMQK----------EFAQEVFIMRKVRHK 349
+ GS+G+ V I V K RI +K F QE+ IM+ + H
Sbjct: 17 IGRGSWGE----------VKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHP 66
Query: 350 NVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQN 409
N+++ + +V E +GG +++ + K VF+ ++ DV + Y H+
Sbjct: 67 NIIRLYETFEDNTDIYLVMELCTGGELFERVVH-KRVFRESDAARIMKDVLSAVAYCHKL 125
Query: 410 NIIHRDLKAANLLM---DENEVVKVADFGVARVKAQSGVMTAETGTYRWMAPEVIEHKPY 466
N+ HRDLK N L + +K+ DFG+A +M + GT +++P+V+E Y
Sbjct: 126 NVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKMMRTKVGTPYYVSPQVLEGL-Y 184
Query: 467 DHKADVFSFGIVLWELLTGKLPY 489
+ D +S G++++ LL G P+
Sbjct: 185 GPECDEWSAGVMMYVLLCGYPPF 207
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 51/193 (26%), Positives = 96/193 (49%), Gaps = 6/193 (3%)
Query: 299 KVASGSYGDLY--RGTYCSQDVAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQFIG 356
K+ G+YG +Y R + VA+K ++ + + +E+ +++++ H N+V+ +
Sbjct: 9 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLD 68
Query: 357 ACTKPPSLCIVTEFMSGG-SVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRD 415
L +V EF+ + L G+ LP + + +G+ + H + ++HRD
Sbjct: 69 VIHTENKLYLVFEFLHQDLKKFMDASALTGI-PLPLIKSYLFQLLQGLAFCHSHRVLHRD 127
Query: 416 LKAANLLMDENEVVKVADFGVARV-KAQSGVMTAETGTYRWMAPEV-IEHKPYDHKADVF 473
LK NLL++ +K+ADFG+AR T E T + APE+ + K Y D++
Sbjct: 128 LKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIW 187
Query: 474 SFGIVLWELLTGK 486
S G + E++T +
Sbjct: 188 SLGCIFAEMVTRR 200
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 51/193 (26%), Positives = 96/193 (49%), Gaps = 6/193 (3%)
Query: 299 KVASGSYGDLY--RGTYCSQDVAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQFIG 356
K+ G+YG +Y R + VA+K ++ + + +E+ +++++ H N+V+ +
Sbjct: 10 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLD 69
Query: 357 ACTKPPSLCIVTEFMSGG-SVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRD 415
L +V EF+ + L G+ LP + + +G+ + H + ++HRD
Sbjct: 70 VIHTENKLYLVFEFLHQDLKKFMDASALTGI-PLPLIKSYLFQLLQGLAFCHSHRVLHRD 128
Query: 416 LKAANLLMDENEVVKVADFGVARV-KAQSGVMTAETGTYRWMAPEV-IEHKPYDHKADVF 473
LK NLL++ +K+ADFG+AR T E T + APE+ + K Y D++
Sbjct: 129 LKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIW 188
Query: 474 SFGIVLWELLTGK 486
S G + E++T +
Sbjct: 189 SLGCIFAEMVTRR 201
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 53/182 (29%), Positives = 90/182 (49%), Gaps = 18/182 (9%)
Query: 316 QDVAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQFIGACTKPPSLCIVTEFMSGGS 375
++VAIK L N K +E+ +M+ V HKN++ + T +L EF
Sbjct: 88 RNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTL---EEFQD--- 141
Query: 376 VYDYLHKLKGVFKLPSLLKVAIDVSK----------GMNYLHQNNIIHRDLKAANLLMDE 425
VY + + L ++++ +D + G+ +LH IIHRDLK +N+++
Sbjct: 142 VYLVMELMDA--NLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKS 199
Query: 426 NEVVKVADFGVARVKAQSGVMTAETGTYRWMAPEVIEHKPYDHKADVFSFGIVLWELLTG 485
+ +K+ DFG+AR S +MT T + APEVI Y D++S G ++ E++
Sbjct: 200 DCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRH 259
Query: 486 KL 487
K+
Sbjct: 260 KI 261
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 51/193 (26%), Positives = 96/193 (49%), Gaps = 6/193 (3%)
Query: 299 KVASGSYGDLY--RGTYCSQDVAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQFIG 356
K+ G+YG +Y R + VA+K ++ + + +E+ +++++ H N+V+ +
Sbjct: 9 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLD 68
Query: 357 ACTKPPSLCIVTEFMSGG-SVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRD 415
L +V EF+ + L G+ LP + + +G+ + H + ++HRD
Sbjct: 69 VIHTENKLYLVFEFLHQDLKKFMDASALTGI-PLPLIKSYLFQLLQGLAFCHSHRVLHRD 127
Query: 416 LKAANLLMDENEVVKVADFGVARV-KAQSGVMTAETGTYRWMAPEV-IEHKPYDHKADVF 473
LK NLL++ +K+ADFG+AR T E T + APE+ + K Y D++
Sbjct: 128 LKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIW 187
Query: 474 SFGIVLWELLTGK 486
S G + E++T +
Sbjct: 188 SLGCIFAEMVTRR 200
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 51/191 (26%), Positives = 95/191 (49%), Gaps = 6/191 (3%)
Query: 299 KVASGSYGDLY--RGTYCSQDVAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQFIG 356
K+ G+YG +Y R + VA+K ++ + + +E+ +++++ H N+V+ +
Sbjct: 10 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLD 69
Query: 357 ACTKPPSLCIVTEFMSGG-SVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRD 415
L +V EF+ + L G+ LP + + +G+ + H + ++HRD
Sbjct: 70 VIHTENKLYLVFEFLHQDLKKFMDASALTGI-PLPLIKSYLFQLLQGLAFCHSHRVLHRD 128
Query: 416 LKAANLLMDENEVVKVADFGVARV-KAQSGVMTAETGTYRWMAPEV-IEHKPYDHKADVF 473
LK NLL++ +K+ADFG+AR T E T + APE+ + K Y D++
Sbjct: 129 LKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIW 188
Query: 474 SFGIVLWELLT 484
S G + E++T
Sbjct: 189 SLGCIFAEMVT 199
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 101/202 (50%), Gaps = 15/202 (7%)
Query: 298 SKVASGSYGDLYRGTYCSQD---VAIKVLKPERINSDMQKEFAQEVFIMRKVR---HKNV 351
+++ G+YG +++ VA+K ++ + M +EV ++R + H NV
Sbjct: 17 AEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNV 76
Query: 352 VQFIGACT-----KPPSLCIVTEFMSGGSVYDYLHKLK--GVFKLPSLLKVAIDVSKGMN 404
V+ CT + L +V E + + YL K+ GV ++ + + +G++
Sbjct: 77 VRLFDVCTVSRTDRETKLTLVFEHVDQ-DLTTYLDKVPEPGV-PTETIKDMMFQLLRGLD 134
Query: 405 YLHQNNIIHRDLKAANLLMDENEVVKVADFGVARVKAQSGVMTAETGTYRWMAPEVIEHK 464
+LH + ++HRDLK N+L+ + +K+ADFG+AR+ + +T+ T + APEV+
Sbjct: 135 FLHSHRVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMALTSVVVTLWYRAPEVLLQS 194
Query: 465 PYDHKADVFSFGIVLWELLTGK 486
Y D++S G + E+ K
Sbjct: 195 SYATPVDLWSVGCIFAEMFRRK 216
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 51/191 (26%), Positives = 95/191 (49%), Gaps = 6/191 (3%)
Query: 299 KVASGSYGDLY--RGTYCSQDVAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQFIG 356
K+ G+YG +Y R + VA+K ++ + + +E+ +++++ H N+V+ +
Sbjct: 13 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLD 72
Query: 357 ACTKPPSLCIVTEFMSGG-SVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRD 415
L +V EF+S + L G+ LP + + +G+ + H + ++HRD
Sbjct: 73 VIHTENKLYLVFEFLSMDLKKFMDASALTGI-PLPLIKSYLFQLLQGLAFCHSHRVLHRD 131
Query: 416 LKAANLLMDENEVVKVADFGVARV-KAQSGVMTAETGTYRWMAPEV-IEHKPYDHKADVF 473
LK NLL++ +K+ADFG+AR E T + APE+ + K Y D++
Sbjct: 132 LKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIW 191
Query: 474 SFGIVLWELLT 484
S G + E++T
Sbjct: 192 SLGCIFAEMVT 202
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 53/184 (28%), Positives = 91/184 (49%), Gaps = 18/184 (9%)
Query: 316 QDVAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQFIGACTKPPSLCIVTEFMSGGS 375
++VAIK L N K +E+ +M+ V HKN++ + T +L EF
Sbjct: 50 RNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTL---EEFQD--- 103
Query: 376 VYDYLHKLKGVFKLPSLLKVAIDVSK----------GMNYLHQNNIIHRDLKAANLLMDE 425
VY + + L ++++ +D + G+ +LH IIHRDLK +N+++
Sbjct: 104 VYLVMELMDA--NLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKS 161
Query: 426 NEVVKVADFGVARVKAQSGVMTAETGTYRWMAPEVIEHKPYDHKADVFSFGIVLWELLTG 485
+ +K+ DFG+AR S +MT T + APEVI Y D++S G ++ E++
Sbjct: 162 DCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRH 221
Query: 486 KLPY 489
K+ +
Sbjct: 222 KILF 225
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 53/184 (28%), Positives = 91/184 (49%), Gaps = 18/184 (9%)
Query: 316 QDVAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQFIGACTKPPSLCIVTEFMSGGS 375
++VAIK L N K +E+ +M+ V HKN++ + T +L EF
Sbjct: 44 RNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTL---EEFQD--- 97
Query: 376 VYDYLHKLKGVFKLPSLLKVAIDVSK----------GMNYLHQNNIIHRDLKAANLLMDE 425
VY + + L ++++ +D + G+ +LH IIHRDLK +N+++
Sbjct: 98 VYLVMELMDA--NLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKS 155
Query: 426 NEVVKVADFGVARVKAQSGVMTAETGTYRWMAPEVIEHKPYDHKADVFSFGIVLWELLTG 485
+ +K+ DFG+AR S +MT T + APEVI Y D++S G ++ E++
Sbjct: 156 DCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRH 215
Query: 486 KLPY 489
K+ +
Sbjct: 216 KILF 219
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 53/184 (28%), Positives = 91/184 (49%), Gaps = 18/184 (9%)
Query: 316 QDVAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQFIGACTKPPSLCIVTEFMSGGS 375
++VAIK L N K +E+ +M+ V HKN++ + T +L EF
Sbjct: 51 RNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTL---EEFQD--- 104
Query: 376 VYDYLHKLKGVFKLPSLLKVAIDVSK----------GMNYLHQNNIIHRDLKAANLLMDE 425
VY + + L ++++ +D + G+ +LH IIHRDLK +N+++
Sbjct: 105 VYLVMELMDA--NLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKS 162
Query: 426 NEVVKVADFGVARVKAQSGVMTAETGTYRWMAPEVIEHKPYDHKADVFSFGIVLWELLTG 485
+ +K+ DFG+AR S +MT T + APEVI Y D++S G ++ E++
Sbjct: 163 DCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRH 222
Query: 486 KLPY 489
K+ +
Sbjct: 223 KILF 226
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 53/184 (28%), Positives = 91/184 (49%), Gaps = 18/184 (9%)
Query: 316 QDVAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQFIGACTKPPSLCIVTEFMSGGS 375
++VAIK L N K +E+ +M+ V HKN++ + T +L EF
Sbjct: 49 RNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTL---EEFQD--- 102
Query: 376 VYDYLHKLKGVFKLPSLLKVAIDVSK----------GMNYLHQNNIIHRDLKAANLLMDE 425
VY + + L ++++ +D + G+ +LH IIHRDLK +N+++
Sbjct: 103 VYLVMELMDA--NLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKS 160
Query: 426 NEVVKVADFGVARVKAQSGVMTAETGTYRWMAPEVIEHKPYDHKADVFSFGIVLWELLTG 485
+ +K+ DFG+AR S +MT T + APEVI Y D++S G ++ E++
Sbjct: 161 DCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRH 220
Query: 486 KLPY 489
K+ +
Sbjct: 221 KILF 224
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 53/184 (28%), Positives = 91/184 (49%), Gaps = 18/184 (9%)
Query: 316 QDVAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQFIGACTKPPSLCIVTEFMSGGS 375
++VAIK L N K +E+ +M+ V HKN++ + T +L EF
Sbjct: 44 RNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTL---EEFQD--- 97
Query: 376 VYDYLHKLKGVFKLPSLLKVAIDVSK----------GMNYLHQNNIIHRDLKAANLLMDE 425
VY + + L ++++ +D + G+ +LH IIHRDLK +N+++
Sbjct: 98 VYLVMELMDA--NLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKS 155
Query: 426 NEVVKVADFGVARVKAQSGVMTAETGTYRWMAPEVIEHKPYDHKADVFSFGIVLWELLTG 485
+ +K+ DFG+AR S +MT T + APEVI Y D++S G ++ E++
Sbjct: 156 DCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRH 215
Query: 486 KLPY 489
K+ +
Sbjct: 216 KILF 219
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 53/184 (28%), Positives = 91/184 (49%), Gaps = 18/184 (9%)
Query: 316 QDVAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQFIGACTKPPSLCIVTEFMSGGS 375
++VAIK L N K +E+ +M+ V HKN++ + T +L EF
Sbjct: 50 RNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTL---EEFQD--- 103
Query: 376 VYDYLHKLKGVFKLPSLLKVAIDVSK----------GMNYLHQNNIIHRDLKAANLLMDE 425
VY + + L ++++ +D + G+ +LH IIHRDLK +N+++
Sbjct: 104 VYLVMELMDA--NLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKS 161
Query: 426 NEVVKVADFGVARVKAQSGVMTAETGTYRWMAPEVIEHKPYDHKADVFSFGIVLWELLTG 485
+ +K+ DFG+AR S +MT T + APEVI Y D++S G ++ E++
Sbjct: 162 DCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRH 221
Query: 486 KLPY 489
K+ +
Sbjct: 222 KILF 225
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 53/184 (28%), Positives = 91/184 (49%), Gaps = 18/184 (9%)
Query: 316 QDVAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQFIGACTKPPSLCIVTEFMSGGS 375
++VAIK L N K +E+ +M+ V HKN++ + T +L EF
Sbjct: 43 RNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTL---EEFQD--- 96
Query: 376 VYDYLHKLKGVFKLPSLLKVAIDVSK----------GMNYLHQNNIIHRDLKAANLLMDE 425
VY + + L ++++ +D + G+ +LH IIHRDLK +N+++
Sbjct: 97 VYLVMELMDA--NLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKS 154
Query: 426 NEVVKVADFGVARVKAQSGVMTAETGTYRWMAPEVIEHKPYDHKADVFSFGIVLWELLTG 485
+ +K+ DFG+AR S +MT T + APEVI Y D++S G ++ E++
Sbjct: 155 DCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRH 214
Query: 486 KLPY 489
K+ +
Sbjct: 215 KILF 218
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 53/184 (28%), Positives = 91/184 (49%), Gaps = 18/184 (9%)
Query: 316 QDVAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQFIGACTKPPSLCIVTEFMSGGS 375
++VAIK L N K +E+ +M+ V HKN++ + T +L EF
Sbjct: 51 RNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTL---EEFQD--- 104
Query: 376 VYDYLHKLKGVFKLPSLLKVAIDVSK----------GMNYLHQNNIIHRDLKAANLLMDE 425
VY + + L ++++ +D + G+ +LH IIHRDLK +N+++
Sbjct: 105 VYLVMELMDA--NLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKS 162
Query: 426 NEVVKVADFGVARVKAQSGVMTAETGTYRWMAPEVIEHKPYDHKADVFSFGIVLWELLTG 485
+ +K+ DFG+AR S +MT T + APEVI Y D++S G ++ E++
Sbjct: 163 DCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRH 222
Query: 486 KLPY 489
K+ +
Sbjct: 223 KILF 226
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 51/191 (26%), Positives = 95/191 (49%), Gaps = 6/191 (3%)
Query: 299 KVASGSYGDLY--RGTYCSQDVAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQFIG 356
K+ G+YG +Y R + VA+K ++ + + +E+ +++++ H N+V+ +
Sbjct: 11 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLD 70
Query: 357 ACTKPPSLCIVTEFMSGG-SVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRD 415
L +V EF+S + L G+ LP + + +G+ + H + ++HRD
Sbjct: 71 VIHTENKLYLVFEFLSMDLKKFMDASALTGI-PLPLIKSYLFQLLQGLAFCHSHRVLHRD 129
Query: 416 LKAANLLMDENEVVKVADFGVARV-KAQSGVMTAETGTYRWMAPEV-IEHKPYDHKADVF 473
LK NLL++ +K+ADFG+AR E T + APE+ + K Y D++
Sbjct: 130 LKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIW 189
Query: 474 SFGIVLWELLT 484
S G + E++T
Sbjct: 190 SLGCIFAEMVT 200
>pdb|3FHR|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase-Activated Protein Kinase 3
(Mk3)-Inhibitor Complex
pdb|3FXW|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase- Activated Protein Kinase 3INHIBITOR 2
COMPLEX
Length = 336
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 43/132 (32%), Positives = 72/132 (54%), Gaps = 7/132 (5%)
Query: 363 SLCIVTEFMSGGSVYDYLHKLKG--VFKLPSLLKVAIDVSKGMNYLHQNNIIHRDLKAAN 420
L I+ E M GG ++ + + +G F ++ D+ + +LH +NI HRD+K N
Sbjct: 100 CLLIIMECMEGGELFSRIQE-RGDQAFTEREAAEIMRDIGTAIQFLHSHNIAHRDVKPEN 158
Query: 421 LLMDENE---VVKVADFGVARVKAQSGVMTAETGTYRWMAPEVIEHKPYDHKADVFSFGI 477
LL E V+K+ DFG A+ Q+ + T Y ++APEV+ + YD D++S G+
Sbjct: 159 LLYTSKEKDAVLKLTDFGFAKETTQNALQTPCYTPY-YVAPEVLGPEKYDKSCDMWSLGV 217
Query: 478 VLWELLTGKLPY 489
+++ LL G P+
Sbjct: 218 IMYILLCGFPPF 229
>pdb|3R1N|A Chain A, Mk3 Kinase Bound To Compound 5b
pdb|3SHE|A Chain A, Novel Atp-Competitive Mk2 Inhibitors With Potent
Biochemical And Cell- Based Activity Throughout The
Series
Length = 317
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 43/132 (32%), Positives = 72/132 (54%), Gaps = 7/132 (5%)
Query: 363 SLCIVTEFMSGGSVYDYLHKLKG--VFKLPSLLKVAIDVSKGMNYLHQNNIIHRDLKAAN 420
L I+ E M GG ++ + + +G F ++ D+ + +LH +NI HRD+K N
Sbjct: 81 CLLIIMECMEGGELFSRIQE-RGDQAFTEREAAEIMRDIGTAIQFLHSHNIAHRDVKPEN 139
Query: 421 LLMDENE---VVKVADFGVARVKAQSGVMTAETGTYRWMAPEVIEHKPYDHKADVFSFGI 477
LL E V+K+ DFG A+ Q+ + T Y ++APEV+ + YD D++S G+
Sbjct: 140 LLYTSKEKDAVLKLTDFGFAKETTQNALQTPCYTPY-YVAPEVLGPEKYDKSCDMWSLGV 198
Query: 478 VLWELLTGKLPY 489
+++ LL G P+
Sbjct: 199 IMYILLCGFPPF 210
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 51/194 (26%), Positives = 93/194 (47%), Gaps = 5/194 (2%)
Query: 299 KVASGSYGDLYRGTY--CSQDVAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQFIG 356
K+ G+YG +++ + VA+K ++ + + + +E+ ++++++HKN+V+
Sbjct: 9 KIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHD 68
Query: 357 ACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDL 416
L +V EF + Y G + + KG+ + H N++HRDL
Sbjct: 69 VLHSDKKLTLVFEFCDQ-DLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHSRNVLHRDL 127
Query: 417 KAANLLMDENEVVKVADFGVARVKA-QSGVMTAETGTYRWMAPEVI-EHKPYDHKADVFS 474
K NLL++ N +K+ADFG+AR +AE T + P+V+ K Y D++S
Sbjct: 128 KPQNLLINRNGELKLADFGLARAFGIPVRCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWS 187
Query: 475 FGIVLWELLTGKLP 488
G + EL P
Sbjct: 188 AGCIFAELANAARP 201
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 99/204 (48%), Gaps = 15/204 (7%)
Query: 300 VASGSYGDLYRGTYCSQDVAIKVLKPERINSDMQKE---FAQEVFIMRKVRHKNVVQFIG 356
+ +GSYG + S D I V K S + E EV ++R+++H N+V++
Sbjct: 14 IGTGSYGRCQKIRRKS-DGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYD 72
Query: 357 ACT--KPPSLCIVTEFMSGG---SVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNN- 410
+L IV E+ GG SV K + +L+V ++ + H+ +
Sbjct: 73 RIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSD 132
Query: 411 ----IIHRDLKAANLLMDENEVVKVADFGVARVKAQSGVMTAE-TGTYRWMAPEVIEHKP 465
++HRDLK AN+ +D + VK+ DFG+AR+ E GT +M+PE +
Sbjct: 133 GGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDEDFAKEFVGTPYYMSPEQMNRMS 192
Query: 466 YDHKADVFSFGIVLWELLTGKLPY 489
Y+ K+D++S G +L+EL P+
Sbjct: 193 YNEKSDIWSLGCLLYELCALMPPF 216
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 64/237 (27%), Positives = 116/237 (48%), Gaps = 32/237 (13%)
Query: 287 WEIDPKHLKFGSKVASGSYG------DLYRGTYCSQDVAIKVLKPERINSDMQKEFAQEV 340
+++ P++ + + G+YG D R T VAIK + P + Q+ +E+
Sbjct: 39 FDVGPRYTQL-QYIGEGAYGMVSSAYDHVRKT----RVAIKKISPFEHQTYCQRTL-REI 92
Query: 341 FIMRKVRHKNVV---QFIGACTKPP--SLCIVTEFMSGGSVYDYLHKLKGVFKLPS--LL 393
I+ + RH+NV+ + A T + IV + M L+KL +L + +
Sbjct: 93 QILLRFRHENVIGIRDILRASTLEAMRDVYIVQDLMETD-----LYKLLKSQQLSNDHIC 147
Query: 394 KVAIDVSKGMNYLHQNNIIHRDLKAANLLMDENEVVKVADFGVARVK----AQSGVMTAE 449
+ +G+ Y+H N++HRDLK +NLL++ +K+ DFG+AR+ +G +T
Sbjct: 148 YFLYQILRGLKYIHSANVLHRDLKPSNLLINTTCDLKICDFGLARIADPEHDHTGFLTEX 207
Query: 450 TGTYRWMAPEV-IEHKPYDHKADVFSFGIVLWELLTGKLPY---EYLTPLQAAVGVV 502
T + APE+ + K Y D++S G +L E+L+ + + YL L +G++
Sbjct: 208 VATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGIL 264
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 97/199 (48%), Gaps = 12/199 (6%)
Query: 300 VASGSYGDLYRG--TYCSQDVAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQFIGA 357
+ SG+ G + T +VA+K L N K +E+ +++ V HKN++ +
Sbjct: 32 IGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNIISLLNV 91
Query: 358 CTKPPSL------CIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNI 411
T +L +V E M ++ +H ++ LL + G+ +LH I
Sbjct: 92 FTPQKTLEEFQDVYLVMELMDA-NLCQVIHMELDHERMSYLL---YQMLCGIKHLHSAGI 147
Query: 412 IHRDLKAANLLMDENEVVKVADFGVARVKAQSGVMTAETGTYRWMAPEVIEHKPYDHKAD 471
IHRDLK +N+++ + +K+ DFG+AR + +MT T + APEVI Y D
Sbjct: 148 IHRDLKPSNIVVKSDCTLKILDFGLARTACTNFMMTPYVVTRYYRAPEVILGMGYAANVD 207
Query: 472 VFSFGIVLWELLTGKLPYE 490
++S G ++ EL+ G + ++
Sbjct: 208 IWSVGCIMGELVKGCVIFQ 226
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 101/202 (50%), Gaps = 15/202 (7%)
Query: 298 SKVASGSYGDLYRGTYCSQD---VAIKVLKPERINSDMQKEFAQEVFIMRKVR---HKNV 351
+++ G+YG +++ VA+K ++ + M +EV ++R + H NV
Sbjct: 17 AEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNV 76
Query: 352 VQFIGACT-----KPPSLCIVTEFMSGGSVYDYLHKLK--GVFKLPSLLKVAIDVSKGMN 404
V+ CT + L +V E + + YL K+ GV ++ + + +G++
Sbjct: 77 VRLFDVCTVSRTDRETKLTLVFEHVDQ-DLTTYLDKVPEPGV-PTETIKDMMFQLLRGLD 134
Query: 405 YLHQNNIIHRDLKAANLLMDENEVVKVADFGVARVKAQSGVMTAETGTYRWMAPEVIEHK 464
+LH + ++HRDLK N+L+ + +K+ADFG+AR+ + +T+ T + APEV+
Sbjct: 135 FLHSHRVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMALTSVVVTLWYRAPEVLLQS 194
Query: 465 PYDHKADVFSFGIVLWELLTGK 486
Y D++S G + E+ K
Sbjct: 195 SYATPVDLWSVGCIFAEMFRRK 216
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 101/202 (50%), Gaps = 15/202 (7%)
Query: 298 SKVASGSYGDLYRGTYCSQD---VAIKVLKPERINSDMQKEFAQEVFIMRKVR---HKNV 351
+++ G+YG +++ VA+K ++ + M +EV ++R + H NV
Sbjct: 17 AEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNV 76
Query: 352 VQFIGACT-----KPPSLCIVTEFMSGGSVYDYLHKLK--GVFKLPSLLKVAIDVSKGMN 404
V+ CT + L +V E + + YL K+ GV ++ + + +G++
Sbjct: 77 VRLFDVCTVSRTDRETKLTLVFEHVDQ-DLTTYLDKVPEPGV-PTETIKDMMFQLLRGLD 134
Query: 405 YLHQNNIIHRDLKAANLLMDENEVVKVADFGVARVKAQSGVMTAETGTYRWMAPEVIEHK 464
+LH + ++HRDLK N+L+ + +K+ADFG+AR+ + +T+ T + APEV+
Sbjct: 135 FLHSHRVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMALTSVVVTLWYRAPEVLLQS 194
Query: 465 PYDHKADVFSFGIVLWELLTGK 486
Y D++S G + E+ K
Sbjct: 195 SYATPVDLWSVGCIFAEMFRRK 216
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 105/199 (52%), Gaps = 14/199 (7%)
Query: 315 SQDVAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQFIGACTKPPSLCIVTEFMSGG 374
+Q A+K++ +R+ ++ QKE + H N+V+ +V E ++GG
Sbjct: 36 NQAFAVKIIS-KRMEANTQKEITA---LKLCEGHPNIVKLHEVFHDQLHTFLVMELLNGG 91
Query: 375 SVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDLKAANLLM-DENE--VVKV 431
+++ + K K F + + ++++H ++HRDLK NLL DEN+ +K+
Sbjct: 92 ELFERIKK-KKHFSETEASYIMRKLVSAVSHMHDVGVVHRDLKPENLLFTDENDNLEIKI 150
Query: 432 ADFGVARVKA-QSGVMTAETGTYRWMAPEVIEHKPYDHKADVFSFGIVLWELLTGKLPYE 490
DFG AR+K + + T + APE++ YD D++S G++L+ +L+G++P++
Sbjct: 151 IDFGFARLKPPDNQPLKTPCFTLHYAAPELLNQNGYDESCDLWSLGVILYTMLSGQVPFQ 210
Query: 491 ----YLTPLQAAVGVVQKV 505
LT +AV +++K+
Sbjct: 211 SHDRSLT-CTSAVEIMKKI 228
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 50/191 (26%), Positives = 94/191 (49%), Gaps = 6/191 (3%)
Query: 299 KVASGSYGDLY--RGTYCSQDVAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQFIG 356
K+ G+YG +Y R + VA+K ++ + + +E+ +++++ H N+V+ +
Sbjct: 13 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLD 72
Query: 357 ACTKPPSLCIVTEFMSGG-SVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRD 415
L +V EF+ + L G+ LP + + +G+ + H + ++HRD
Sbjct: 73 VIHTENKLYLVFEFLHQDLKTFMDASALTGI-PLPLIKSYLFQLLQGLAFCHSHRVLHRD 131
Query: 416 LKAANLLMDENEVVKVADFGVARV-KAQSGVMTAETGTYRWMAPEV-IEHKPYDHKADVF 473
LK NLL++ +K+ADFG+AR E T + APE+ + K Y D++
Sbjct: 132 LKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIW 191
Query: 474 SFGIVLWELLT 484
S G + E++T
Sbjct: 192 SLGCIFAEMVT 202
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 45/185 (24%), Positives = 96/185 (51%), Gaps = 17/185 (9%)
Query: 315 SQDVAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQFIGACTKPPSLCIVTEFMSGG 374
Q+ A K++ +++++ ++ +E I R ++H N+V+ + ++ ++ + ++GG
Sbjct: 47 GQEYAAKIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDSISEEGHHYLIFDLVTGG 106
Query: 375 SVYD------YLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDLKAANLLMD---E 425
+++ Y + + +L+ + + HQ ++HRDLK NLL+ +
Sbjct: 107 ELFEDIVAREYYSEADASHCIQQILEAVL-------HCHQMGVVHRDLKPENLLLASKLK 159
Query: 426 NEVVKVADFGVA-RVKAQSGVMTAETGTYRWMAPEVIEHKPYDHKADVFSFGIVLWELLT 484
VK+ADFG+A V+ + GT +++PEV+ PY D+++ G++L+ LL
Sbjct: 160 GAAVKLADFGLAIEVEGEQQAWFGFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLV 219
Query: 485 GKLPY 489
G P+
Sbjct: 220 GYPPF 224
>pdb|3K2L|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2)
Length = 429
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 59/198 (29%), Positives = 103/198 (52%), Gaps = 19/198 (9%)
Query: 300 VASGSYGDLYRGT--YCSQDVAIKVLKPERINSDMQKEFAQEVFIMRKVRHK------NV 351
+ G +G + + Q VA+K+++ E+ ++ A+E+ I+ +R + NV
Sbjct: 105 IGKGXFGQVVKAYDHKVHQHVALKMVRNEK---RFHRQAAEEIRILEHLRKQDKDNTMNV 161
Query: 352 VQFIGACTKPPSLCIVTEFMSGGSVYDYL--HKLKGVFKLPSLLKVAIDVSKGMNYLHQN 409
+ + T +C+ E +S ++Y+ + +K +G F LP + K A + + ++ LH+N
Sbjct: 162 IHMLENFTFRNHICMTFELLSM-NLYELIKKNKFQG-FSLPLVRKFAHSILQCLDALHKN 219
Query: 410 NIIHRDLKAANLLMDEN--EVVKVADFGVARVKAQSGVMTAETGTYRWMAPEVIEHKPYD 467
IIH DLK N+L+ + +KV DFG + + Q ++ YR APEVI Y
Sbjct: 220 RIIHCDLKPENILLKQQGRSGIKVIDFGSSCYEHQRVYXXIQSRFYR--APEVILGARYG 277
Query: 468 HKADVFSFGIVLWELLTG 485
D++S G +L ELLTG
Sbjct: 278 MPIDMWSLGCILAELLTG 295
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 75.5 bits (184), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 99/204 (48%), Gaps = 15/204 (7%)
Query: 300 VASGSYGDLYRGTYCSQDVAIKVLKPERINSDMQKE---FAQEVFIMRKVRHKNVVQFIG 356
+ +GSYG + S D I V K S + E EV ++R+++H N+V++
Sbjct: 14 IGTGSYGRCQKIRRKS-DGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYD 72
Query: 357 ACT--KPPSLCIVTEFMSGG---SVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNN- 410
+L IV E+ GG SV K + +L+V ++ + H+ +
Sbjct: 73 RIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSD 132
Query: 411 ----IIHRDLKAANLLMDENEVVKVADFGVARV-KAQSGVMTAETGTYRWMAPEVIEHKP 465
++HRDLK AN+ +D + VK+ DFG+AR+ + GT +M+PE +
Sbjct: 133 GGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSFAKTFVGTPYYMSPEQMNRMS 192
Query: 466 YDHKADVFSFGIVLWELLTGKLPY 489
Y+ K+D++S G +L+EL P+
Sbjct: 193 YNEKSDIWSLGCLLYELCALMPPF 216
>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
pdb|3G2F|B Chain B, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
Length = 336
Score = 75.5 bits (184), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 67/253 (26%), Positives = 110/253 (43%), Gaps = 50/253 (19%)
Query: 289 IDPKHLKFGSKVASGSYGDLYRGTYCSQDVAIKVLKPERINSDMQKEFAQEVFIMRK--V 346
+D +LK + G YG +Y+G+ + VA+KV ++ F E I R +
Sbjct: 10 LDLDNLKLLELIGRGRYGAVYKGSLDERPVAVKVFSFAN-----RQNFINEKNIYRVPLM 64
Query: 347 RHKNVVQFIGACTKPPS-----LCIVTEFMSGGSVYDY--LHKLKGVFKLPSLLKVAIDV 399
H N+ +FI + + +V E+ GS+ Y LH V S ++A V
Sbjct: 65 EHDNIARFIVGDERVTADGRMEYLLVMEYYPNGSLXKYLSLHTSDWV----SSCRLAHSV 120
Query: 400 SKGMNYLHQN---------NIIHRDLKAANLLMDENEVVKVADFGVA---------RVKA 441
++G+ YLH I HRDL + N+L+ + ++DFG++ R
Sbjct: 121 TRGLAYLHTELPRGDHYKPAISHRDLNSRNVLVKNDGTCVISDFGLSMRLTGNRLVRPGE 180
Query: 442 QSGVMTAETGTYRWMAPEVIE-------HKPYDHKADVFSFGIVLWE-------LLTGKL 487
+ +E GT R+MAPEV+E + + D+++ G++ WE L G+
Sbjct: 181 EDNAAISEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIFMRCTDLFPGES 240
Query: 488 PYEYLTPLQAAVG 500
EY Q VG
Sbjct: 241 VPEYQMAFQTEVG 253
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 50/191 (26%), Positives = 94/191 (49%), Gaps = 6/191 (3%)
Query: 299 KVASGSYGDLY--RGTYCSQDVAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQFIG 356
K+ G+YG +Y R + VA+K ++ + + +E+ +++++ H N+V+ +
Sbjct: 12 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLD 71
Query: 357 ACTKPPSLCIVTEFMSGG-SVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRD 415
L +V EF+ + L G+ LP + + +G+ + H + ++HRD
Sbjct: 72 VIHTENKLYLVFEFLHQDLKKFMDASALTGI-PLPLIKSYLFQLLQGLAFCHSHRVLHRD 130
Query: 416 LKAANLLMDENEVVKVADFGVARV-KAQSGVMTAETGTYRWMAPEV-IEHKPYDHKADVF 473
LK NLL++ +K+ADFG+AR E T + APE+ + K Y D++
Sbjct: 131 LKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIW 190
Query: 474 SFGIVLWELLT 484
S G + E++T
Sbjct: 191 SLGCIFAEMVT 201
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 97/201 (48%), Gaps = 14/201 (6%)
Query: 298 SKVASGSYGDLY--RGTYCSQDVAIKVLKPERINSDMQKEFAQEVFIMRKVR---HKNVV 352
+++ G+YG +Y R + VA+K ++ + +EV ++R++ H NVV
Sbjct: 10 AEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLEAFEHPNVV 69
Query: 353 QFIGACT-----KPPSLCIVTEFMSGGSVYDYLHKLKGVFKLP--SLLKVAIDVSKGMNY 405
+ + C + + +V E + + YL K LP ++ + +G+++
Sbjct: 70 RLMDVCATSRTDREIKVTLVFEHVDQ-DLRTYLDKAPPP-GLPAETIKDLMRQFLRGLDF 127
Query: 406 LHQNNIIHRDLKAANLLMDENEVVKVADFGVARVKAQSGVMTAETGTYRWMAPEVIEHKP 465
LH N I+HRDLK N+L+ VK+ADFG+AR+ + + T + APEV+
Sbjct: 128 LHANCIVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALAPVVVTLWYRAPEVLLQST 187
Query: 466 YDHKADVFSFGIVLWELLTGK 486
Y D++S G + E+ K
Sbjct: 188 YATPVDMWSVGCIFAEMFRRK 208
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 50/191 (26%), Positives = 94/191 (49%), Gaps = 6/191 (3%)
Query: 299 KVASGSYGDLY--RGTYCSQDVAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQFIG 356
K+ G+YG +Y R + VA+K ++ + + +E+ +++++ H N+V+ +
Sbjct: 12 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLD 71
Query: 357 ACTKPPSLCIVTEFMSGG-SVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRD 415
L +V EF+ + L G+ LP + + +G+ + H + ++HRD
Sbjct: 72 VIHTENKLYLVFEFLHQDLKKFMDASALTGI-PLPLIKSYLFQLLQGLAFCHSHRVLHRD 130
Query: 416 LKAANLLMDENEVVKVADFGVARV-KAQSGVMTAETGTYRWMAPEV-IEHKPYDHKADVF 473
LK NLL++ +K+ADFG+AR E T + APE+ + K Y D++
Sbjct: 131 LKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIW 190
Query: 474 SFGIVLWELLT 484
S G + E++T
Sbjct: 191 SLGCIFAEMVT 201
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 50/191 (26%), Positives = 94/191 (49%), Gaps = 6/191 (3%)
Query: 299 KVASGSYGDLY--RGTYCSQDVAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQFIG 356
K+ G+YG +Y R + VA+K ++ + + +E+ +++++ H N+V+ +
Sbjct: 13 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLD 72
Query: 357 ACTKPPSLCIVTEFMSGG-SVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRD 415
L +V EF+ + L G+ LP + + +G+ + H + ++HRD
Sbjct: 73 VIHTENKLYLVFEFLHQDLKKFMDASALTGI-PLPLIKSYLFQLLQGLAFCHSHRVLHRD 131
Query: 416 LKAANLLMDENEVVKVADFGVARV-KAQSGVMTAETGTYRWMAPEV-IEHKPYDHKADVF 473
LK NLL++ +K+ADFG+AR E T + APE+ + K Y D++
Sbjct: 132 LKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIW 191
Query: 474 SFGIVLWELLT 484
S G + E++T
Sbjct: 192 SLGCIFAEMVT 202
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 50/191 (26%), Positives = 94/191 (49%), Gaps = 6/191 (3%)
Query: 299 KVASGSYGDLY--RGTYCSQDVAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQFIG 356
K+ G+YG +Y R + VA+K ++ + + +E+ +++++ H N+V+ +
Sbjct: 12 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLD 71
Query: 357 ACTKPPSLCIVTEFMSGG-SVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRD 415
L +V EF+ + L G+ LP + + +G+ + H + ++HRD
Sbjct: 72 VIHTENKLYLVFEFLHQDLKKFMDASALTGI-PLPLIKSYLFQLLQGLAFCHSHRVLHRD 130
Query: 416 LKAANLLMDENEVVKVADFGVARV-KAQSGVMTAETGTYRWMAPEV-IEHKPYDHKADVF 473
LK NLL++ +K+ADFG+AR E T + APE+ + K Y D++
Sbjct: 131 LKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIW 190
Query: 474 SFGIVLWELLT 484
S G + E++T
Sbjct: 191 SLGCIFAEMVT 201
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 50/193 (25%), Positives = 95/193 (49%), Gaps = 6/193 (3%)
Query: 299 KVASGSYGDLY--RGTYCSQDVAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQFIG 356
K+ G+YG +Y R + VA+ ++ + + +E+ +++++ H N+V+ +
Sbjct: 10 KIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLD 69
Query: 357 ACTKPPSLCIVTEFMSGG-SVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRD 415
L +V EF+ + L G+ LP + + +G+ + H + ++HRD
Sbjct: 70 VIHTENKLYLVFEFLHQDLKKFMDASALTGI-PLPLIKSYLFQLLQGLAFCHSHRVLHRD 128
Query: 416 LKAANLLMDENEVVKVADFGVARV-KAQSGVMTAETGTYRWMAPEV-IEHKPYDHKADVF 473
LK NLL++ +K+ADFG+AR T E T + APE+ + K Y D++
Sbjct: 129 LKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIW 188
Query: 474 SFGIVLWELLTGK 486
S G + E++T +
Sbjct: 189 SLGCIFAEMVTRR 201
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 50/193 (25%), Positives = 95/193 (49%), Gaps = 6/193 (3%)
Query: 299 KVASGSYGDLY--RGTYCSQDVAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQFIG 356
K+ G+YG +Y R + VA+ ++ + + +E+ +++++ H N+V+ +
Sbjct: 9 KIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLD 68
Query: 357 ACTKPPSLCIVTEFMSGG-SVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRD 415
L +V EF+ + L G+ LP + + +G+ + H + ++HRD
Sbjct: 69 VIHTENKLYLVFEFLHQDLKKFMDASALTGI-PLPLIKSYLFQLLQGLAFCHSHRVLHRD 127
Query: 416 LKAANLLMDENEVVKVADFGVARV-KAQSGVMTAETGTYRWMAPEV-IEHKPYDHKADVF 473
LK NLL++ +K+ADFG+AR T E T + APE+ + K Y D++
Sbjct: 128 LKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIW 187
Query: 474 SFGIVLWELLTGK 486
S G + E++T +
Sbjct: 188 SLGCIFAEMVTRR 200
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 96/200 (48%), Gaps = 20/200 (10%)
Query: 299 KVASGSYGDLY--RGTYCSQDVAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQFIG 356
K+ G+YG +Y R + VA+K ++ + + +E+ +++++ H N+V+ +
Sbjct: 9 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLD 68
Query: 357 ACTKPPSLCIVTE--------FMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQ 408
L +V E FM + L G+ LP + + +G+ + H
Sbjct: 69 VIHTENKLYLVFEHVHQDLKTFMDASA-------LTGI-PLPLIKSYLFQLLQGLAFCHS 120
Query: 409 NNIIHRDLKAANLLMDENEVVKVADFGVARV-KAQSGVMTAETGTYRWMAPEV-IEHKPY 466
+ ++HRDLK NLL++ +K+ADFG+AR T E T + APE+ + K Y
Sbjct: 121 HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYY 180
Query: 467 DHKADVFSFGIVLWELLTGK 486
D++S G + E++T +
Sbjct: 181 STAVDIWSLGCIFAEMVTRR 200
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 50/193 (25%), Positives = 95/193 (49%), Gaps = 6/193 (3%)
Query: 299 KVASGSYGDLY--RGTYCSQDVAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQFIG 356
K+ G+YG +Y R + VA+K ++ + + +E+ +++++ H N+V+ +
Sbjct: 10 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLD 69
Query: 357 ACTKPPSLCIVTEFMSGG-SVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRD 415
L +V EF+ + L G+ LP + + +G+ + H + ++HRD
Sbjct: 70 VIHTENKLYLVFEFLHQDLKKFMDASALTGI-PLPLIKSYLFQLLQGLAFCHSHRVLHRD 128
Query: 416 LKAANLLMDENEVVKVADFGVARV-KAQSGVMTAETGTYRWMAPEV-IEHKPYDHKADVF 473
LK NLL++ +K+ADFG+AR E T + APE+ + K Y D++
Sbjct: 129 LKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIW 188
Query: 474 SFGIVLWELLTGK 486
S G + E++T +
Sbjct: 189 SLGCIFAEMVTRR 201
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 50/191 (26%), Positives = 94/191 (49%), Gaps = 6/191 (3%)
Query: 299 KVASGSYGDLY--RGTYCSQDVAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQFIG 356
K+ G+YG +Y R + VA+K ++ + + +E+ +++++ H N+V+ +
Sbjct: 13 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLD 72
Query: 357 ACTKPPSLCIVTEFMSGG-SVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRD 415
L +V EF+ + L G+ LP + + +G+ + H + ++HRD
Sbjct: 73 VIHTENKLYLVFEFLHQDLKKFMDASALTGI-PLPLIKSYLFQLLQGLAFCHSHRVLHRD 131
Query: 416 LKAANLLMDENEVVKVADFGVARV-KAQSGVMTAETGTYRWMAPEV-IEHKPYDHKADVF 473
LK NLL++ +K+ADFG+AR E T + APE+ + K Y D++
Sbjct: 132 LKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIW 191
Query: 474 SFGIVLWELLT 484
S G + E++T
Sbjct: 192 SLGCIFAEMVT 202
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 50/193 (25%), Positives = 95/193 (49%), Gaps = 6/193 (3%)
Query: 299 KVASGSYGDLY--RGTYCSQDVAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQFIG 356
K+ G+YG +Y R + VA+K ++ + + +E+ +++++ H N+V+ +
Sbjct: 9 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLD 68
Query: 357 ACTKPPSLCIVTEFMSGG-SVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRD 415
L +V EF+ + L G+ LP + + +G+ + H + ++HRD
Sbjct: 69 VIHTENKLYLVFEFLHQDLKKFMDASALTGI-PLPLIKSYLFQLLQGLAFCHSHRVLHRD 127
Query: 416 LKAANLLMDENEVVKVADFGVARV-KAQSGVMTAETGTYRWMAPEV-IEHKPYDHKADVF 473
LK NLL++ +K+ADFG+AR E T + APE+ + K Y D++
Sbjct: 128 LKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIW 187
Query: 474 SFGIVLWELLTGK 486
S G + E++T +
Sbjct: 188 SLGCIFAEMVTRR 200
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 50/191 (26%), Positives = 94/191 (49%), Gaps = 6/191 (3%)
Query: 299 KVASGSYGDLY--RGTYCSQDVAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQFIG 356
K+ G+YG +Y R + VA+K ++ + + +E+ +++++ H N+V+ +
Sbjct: 11 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLD 70
Query: 357 ACTKPPSLCIVTEFMSGG-SVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRD 415
L +V EF+ + L G+ LP + + +G+ + H + ++HRD
Sbjct: 71 VIHTENKLYLVFEFLHQDLKKFMDASALTGI-PLPLIKSYLFQLLQGLAFCHSHRVLHRD 129
Query: 416 LKAANLLMDENEVVKVADFGVARV-KAQSGVMTAETGTYRWMAPEV-IEHKPYDHKADVF 473
LK NLL++ +K+ADFG+AR E T + APE+ + K Y D++
Sbjct: 130 LKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIW 189
Query: 474 SFGIVLWELLT 484
S G + E++T
Sbjct: 190 SLGCIFAEMVT 200
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 50/191 (26%), Positives = 94/191 (49%), Gaps = 6/191 (3%)
Query: 299 KVASGSYGDLY--RGTYCSQDVAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQFIG 356
K+ G+YG +Y R + VA+K ++ + + +E+ +++++ H N+V+ +
Sbjct: 14 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLD 73
Query: 357 ACTKPPSLCIVTEFMSGG-SVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRD 415
L +V EF+ + L G+ LP + + +G+ + H + ++HRD
Sbjct: 74 VIHTENKLYLVFEFLHQDLKKFMDASALTGI-PLPLIKSYLFQLLQGLAFCHSHRVLHRD 132
Query: 416 LKAANLLMDENEVVKVADFGVARV-KAQSGVMTAETGTYRWMAPEV-IEHKPYDHKADVF 473
LK NLL++ +K+ADFG+AR E T + APE+ + K Y D++
Sbjct: 133 LKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIW 192
Query: 474 SFGIVLWELLT 484
S G + E++T
Sbjct: 193 SLGCIFAEMVT 203
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 50/191 (26%), Positives = 94/191 (49%), Gaps = 6/191 (3%)
Query: 299 KVASGSYGDLY--RGTYCSQDVAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQFIG 356
K+ G+YG +Y R + VA+K ++ + + +E+ +++++ H N+V+ +
Sbjct: 11 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLD 70
Query: 357 ACTKPPSLCIVTEFMSGG-SVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRD 415
L +V EF+ + L G+ LP + + +G+ + H + ++HRD
Sbjct: 71 VIHTENKLYLVFEFLHQDLKKFMDASALTGI-PLPLIKSYLFQLLQGLAFCHSHRVLHRD 129
Query: 416 LKAANLLMDENEVVKVADFGVARV-KAQSGVMTAETGTYRWMAPEV-IEHKPYDHKADVF 473
LK NLL++ +K+ADFG+AR E T + APE+ + K Y D++
Sbjct: 130 LKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIW 189
Query: 474 SFGIVLWELLT 484
S G + E++T
Sbjct: 190 SLGCIFAEMVT 200
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 50/193 (25%), Positives = 95/193 (49%), Gaps = 6/193 (3%)
Query: 299 KVASGSYGDLY--RGTYCSQDVAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQFIG 356
K+ G+YG +Y R + VA+K ++ + + +E+ +++++ H N+V+ +
Sbjct: 10 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLD 69
Query: 357 ACTKPPSLCIVTEFMSGG-SVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRD 415
L +V EF+ + L G+ LP + + +G+ + H + ++HRD
Sbjct: 70 VIHTENKLYLVFEFLHQDLKKFMDASALTGI-PLPLIKSYLFQLLQGLAFCHSHRVLHRD 128
Query: 416 LKAANLLMDENEVVKVADFGVARV-KAQSGVMTAETGTYRWMAPEV-IEHKPYDHKADVF 473
LK NLL++ +K+ADFG+AR E T + APE+ + K Y D++
Sbjct: 129 LKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIW 188
Query: 474 SFGIVLWELLTGK 486
S G + E++T +
Sbjct: 189 SLGCIFAEMVTRR 201
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 50/191 (26%), Positives = 94/191 (49%), Gaps = 6/191 (3%)
Query: 299 KVASGSYGDLY--RGTYCSQDVAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQFIG 356
K+ G+YG +Y R + VA+K ++ + + +E+ +++++ H N+V+ +
Sbjct: 10 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLD 69
Query: 357 ACTKPPSLCIVTEFMSGG-SVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRD 415
L +V EF+ + L G+ LP + + +G+ + H + ++HRD
Sbjct: 70 VIHTENKLYLVFEFLHQDLKKFMDASALTGI-PLPLIKSYLFQLLQGLAFCHSHRVLHRD 128
Query: 416 LKAANLLMDENEVVKVADFGVARV-KAQSGVMTAETGTYRWMAPEV-IEHKPYDHKADVF 473
LK NLL++ +K+ADFG+AR E T + APE+ + K Y D++
Sbjct: 129 LKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIW 188
Query: 474 SFGIVLWELLT 484
S G + E++T
Sbjct: 189 SLGCIFAEMVT 199
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 50/191 (26%), Positives = 94/191 (49%), Gaps = 6/191 (3%)
Query: 299 KVASGSYGDLY--RGTYCSQDVAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQFIG 356
K+ G+YG +Y R + VA+K ++ + + +E+ +++++ H N+V+ +
Sbjct: 11 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLD 70
Query: 357 ACTKPPSLCIVTEFMSGG-SVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRD 415
L +V EF+ + L G+ LP + + +G+ + H + ++HRD
Sbjct: 71 VIHTENKLYLVFEFLHQDLKKFMDASALTGI-PLPLIKSYLFQLLQGLAFCHSHRVLHRD 129
Query: 416 LKAANLLMDENEVVKVADFGVARV-KAQSGVMTAETGTYRWMAPEV-IEHKPYDHKADVF 473
LK NLL++ +K+ADFG+AR E T + APE+ + K Y D++
Sbjct: 130 LKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIW 189
Query: 474 SFGIVLWELLT 484
S G + E++T
Sbjct: 190 SLGCIFAEMVT 200
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 50/191 (26%), Positives = 94/191 (49%), Gaps = 6/191 (3%)
Query: 299 KVASGSYGDLY--RGTYCSQDVAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQFIG 356
K+ G+YG +Y R + VA+K ++ + + +E+ +++++ H N+V+ +
Sbjct: 9 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLD 68
Query: 357 ACTKPPSLCIVTEFMSGG-SVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRD 415
L +V EF+ + L G+ LP + + +G+ + H + ++HRD
Sbjct: 69 VIHTENKLYLVFEFLHQDLKKFMDASALTGI-PLPLIKSYLFQLLQGLAFCHSHRVLHRD 127
Query: 416 LKAANLLMDENEVVKVADFGVARV-KAQSGVMTAETGTYRWMAPEV-IEHKPYDHKADVF 473
LK NLL++ +K+ADFG+AR E T + APE+ + K Y D++
Sbjct: 128 LKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIW 187
Query: 474 SFGIVLWELLT 484
S G + E++T
Sbjct: 188 SLGCIFAEMVT 198
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 50/191 (26%), Positives = 94/191 (49%), Gaps = 6/191 (3%)
Query: 299 KVASGSYGDLY--RGTYCSQDVAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQFIG 356
K+ G+YG +Y R + VA+K ++ + + +E+ +++++ H N+V+ +
Sbjct: 10 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLD 69
Query: 357 ACTKPPSLCIVTEFMSGG-SVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRD 415
L +V EF+ + L G+ LP + + +G+ + H + ++HRD
Sbjct: 70 VIHTENKLYLVFEFLHQDLKKFMDASALTGI-PLPLIKSYLFQLLQGLAFCHSHRVLHRD 128
Query: 416 LKAANLLMDENEVVKVADFGVARV-KAQSGVMTAETGTYRWMAPEV-IEHKPYDHKADVF 473
LK NLL++ +K+ADFG+AR E T + APE+ + K Y D++
Sbjct: 129 LKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIW 188
Query: 474 SFGIVLWELLT 484
S G + E++T
Sbjct: 189 SLGCIFAEMVT 199
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/196 (31%), Positives = 99/196 (50%), Gaps = 14/196 (7%)
Query: 300 VASGSYGDLYRGT--YCSQDVAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQFIGA 357
V SG+YG + VAIK L + K +E+ +++ +RH+NV+ +
Sbjct: 33 VGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDV 92
Query: 358 CTKPPSLCIVTEF-----MSGGSVYDYL-HKLKGVFKLPSLLKVAIDVSKGMNYLHQNNI 411
T +L T+F G + + H+ G ++ L+ + KG+ Y+H I
Sbjct: 93 FTPDETLDDFTDFYLVMPFMGTDLGKLMKHEKLGEDRIQFLV---YQMLKGLRYIHAAGI 149
Query: 412 IHRDLKAANLLMDENEVVKVADFGVARVKAQSGVMTAETGTYRWMAPEVIEH-KPYDHKA 470
IHRDLK NL ++E+ +K+ DFG+AR +A S M T + APEVI + Y
Sbjct: 150 IHRDLKPGNLAVNEDCELKILDFGLAR-QADSE-MXGXVVTRWYRAPEVILNWMRYTQTV 207
Query: 471 DVFSFGIVLWELLTGK 486
D++S G ++ E++TGK
Sbjct: 208 DIWSVGCIMAEMITGK 223
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 102/217 (47%), Gaps = 17/217 (7%)
Query: 299 KVASGSYGDLYRG-TYCSQDVAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQFIGA 357
K+ G+YG +Y+ + A+K ++ E+ + + +E+ I+++++H N+V+
Sbjct: 9 KIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDV 68
Query: 358 CTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDLK 417
L +V E + + L +G + + + + G+ Y H ++HRDLK
Sbjct: 69 IHTKKRLVLVFEHLDQ-DLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDRRVLHRDLK 127
Query: 418 AANLLMDENEVVKVADFGVARVKAQSGV----MTAETGTYRWMAPEVI-EHKPYDHKADV 472
NLL++ +K+ADFG+AR G+ T E T + AP+V+ K Y D+
Sbjct: 128 PQNLLINREGELKIADFGLARA---FGIPVRKYTHEVVTLWYRAPDVLMGSKKYSTTIDI 184
Query: 473 FSFGIVLWELLTGKLPYEYLTPLQAAVGVVQKVHHSF 509
+S G + E++ G TPL V ++ F
Sbjct: 185 WSVGCIFAEMVNG-------TPLFPGVSEADQLMRIF 214
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 97/201 (48%), Gaps = 14/201 (6%)
Query: 298 SKVASGSYGDLY--RGTYCSQDVAIKVLKPERINSDMQKEFAQEVFIMRKVR---HKNVV 352
+++ G+YG +Y R + VA+K ++ + +EV ++R++ H NVV
Sbjct: 10 AEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLEAFEHPNVV 69
Query: 353 QFIGACT-----KPPSLCIVTEFMSGGSVYDYLHKLKGVFKLP--SLLKVAIDVSKGMNY 405
+ + C + + +V E + + YL K LP ++ + +G+++
Sbjct: 70 RLMDVCATSRTDREIKVTLVFEHVDQ-DLRTYLDKAPPP-GLPAETIKDLMRQFLRGLDF 127
Query: 406 LHQNNIIHRDLKAANLLMDENEVVKVADFGVARVKAQSGVMTAETGTYRWMAPEVIEHKP 465
LH N I+HRDLK N+L+ VK+ADFG+AR+ + + T + APEV+
Sbjct: 128 LHANCIVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALDPVVVTLWYRAPEVLLQST 187
Query: 466 YDHKADVFSFGIVLWELLTGK 486
Y D++S G + E+ K
Sbjct: 188 YATPVDMWSVGCIFAEMFRRK 208
>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From
Cryptosporidium Parvum, Cgd7_40
Length = 345
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 73/266 (27%), Positives = 113/266 (42%), Gaps = 66/266 (24%)
Query: 283 GTDVWEIDPK-HLKFGSKVASGSYGDLYRGTYCSQDVAIKVLKP------ERINSDMQKE 335
G + E+ K HLK + GSYG + R +Q AI+ +K +IN +
Sbjct: 18 GGSLLELQKKYHLK--GAIGQGSYG-VVRVAIENQTRAIRAIKIMNKNKIRQINPKDVER 74
Query: 336 FAQEVFIMRKVRHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKV 395
EV +M+K+ H N+ + +C+V E GG + D L+ VF S K
Sbjct: 75 IKTEVRLMKKLHHPNIARLYEVYEDEQYICLVMELCHGGHLLDKLN----VFIDDSTGKC 130
Query: 396 AIDVSK-------------------------------------------GMNYLHQNNII 412
A+DV K ++YLH I
Sbjct: 131 AMDVVKTQICPCPECNEEAINGSIHGFRESLDFVQREKLISNIMRQIFSALHYLHNQGIC 190
Query: 413 HRDLKAANLLMDENEV--VKVADFGVAR--VKAQSGV---MTAETGTYRWMAPEVIE--H 463
HRD+K N L N+ +K+ DFG+++ K +G MT + GT ++APEV+ +
Sbjct: 191 HRDIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTN 250
Query: 464 KPYDHKADVFSFGIVLWELLTGKLPY 489
+ Y K D +S G++L LL G +P+
Sbjct: 251 ESYGPKCDAWSAGVLLHLLLMGAVPF 276
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 102/217 (47%), Gaps = 17/217 (7%)
Query: 299 KVASGSYGDLYRG-TYCSQDVAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQFIGA 357
K+ G+YG +Y+ + A+K ++ E+ + + +E+ I+++++H N+V+
Sbjct: 9 KIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDV 68
Query: 358 CTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDLK 417
L +V E + + L +G + + + + G+ Y H ++HRDLK
Sbjct: 69 IHTKKRLVLVFEHLDQ-DLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDRRVLHRDLK 127
Query: 418 AANLLMDENEVVKVADFGVARVKAQSGV----MTAETGTYRWMAPEVI-EHKPYDHKADV 472
NLL++ +K+ADFG+AR G+ T E T + AP+V+ K Y D+
Sbjct: 128 PQNLLINREGELKIADFGLARA---FGIPVRKYTHEIVTLWYRAPDVLMGSKKYSTTIDI 184
Query: 473 FSFGIVLWELLTGKLPYEYLTPLQAAVGVVQKVHHSF 509
+S G + E++ G TPL V ++ F
Sbjct: 185 WSVGCIFAEMVNG-------TPLFPGVSEADQLMRIF 214
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 50/194 (25%), Positives = 93/194 (47%), Gaps = 5/194 (2%)
Query: 299 KVASGSYGDLYRGTY--CSQDVAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQFIG 356
K+ G+YG +++ + VA+K ++ + + + +E+ ++++++HKN+V+
Sbjct: 9 KIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHD 68
Query: 357 ACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDL 416
L +V EF + Y G + + KG+ + H N++HRDL
Sbjct: 69 VLHSDKKLTLVFEFCDQ-DLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHSRNVLHRDL 127
Query: 417 KAANLLMDENEVVKVADFGVARVKA-QSGVMTAETGTYRWMAPEVI-EHKPYDHKADVFS 474
K NLL++ N +K+A+FG+AR +AE T + P+V+ K Y D++S
Sbjct: 128 KPQNLLINRNGELKLANFGLARAFGIPVRCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWS 187
Query: 475 FGIVLWELLTGKLP 488
G + EL P
Sbjct: 188 AGCIFAELANAGRP 201
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 50/193 (25%), Positives = 95/193 (49%), Gaps = 10/193 (5%)
Query: 299 KVASGSYGDLYRG-TYCSQDVAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQFIGA 357
K+ G+YG +Y+ + A+K ++ E+ + + +E+ I+++++H N+V+
Sbjct: 9 KIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDV 68
Query: 358 CTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDLK 417
L +V E + + L +G + + + + G+ Y H ++HRDLK
Sbjct: 69 IHTKKRLVLVFEHLDQ-DLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDRRVLHRDLK 127
Query: 418 AANLLMDENEVVKVADFGVARVKAQSGV----MTAETGTYRWMAPEVI-EHKPYDHKADV 472
NLL++ +K+ADFG+AR G+ T E T + AP+V+ K Y D+
Sbjct: 128 PQNLLINREGELKIADFGLARA---FGIPVRKYTHEVVTLWYRAPDVLMGSKKYSTTIDI 184
Query: 473 FSFGIVLWELLTG 485
+S G + E++ G
Sbjct: 185 WSVGCIFAEMVNG 197
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 97/201 (48%), Gaps = 14/201 (6%)
Query: 298 SKVASGSYGDLY--RGTYCSQDVAIKVLKPERINSDMQKEFAQEVFIMRKVR---HKNVV 352
+++ G+YG +Y R + VA+K ++ + +EV ++R++ H NVV
Sbjct: 10 AEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLEAFEHPNVV 69
Query: 353 QFIGACT-----KPPSLCIVTEFMSGGSVYDYLHKLKGVFKLP--SLLKVAIDVSKGMNY 405
+ + C + + +V E + + YL K LP ++ + +G+++
Sbjct: 70 RLMDVCATSRTDREIKVTLVFEHVDQ-DLRTYLDKAPPP-GLPAETIKDLMRQFLRGLDF 127
Query: 406 LHQNNIIHRDLKAANLLMDENEVVKVADFGVARVKAQSGVMTAETGTYRWMAPEVIEHKP 465
LH N I+HRDLK N+L+ VK+ADFG+AR+ + + T + APEV+
Sbjct: 128 LHANCIVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALFPVVVTLWYRAPEVLLQST 187
Query: 466 YDHKADVFSFGIVLWELLTGK 486
Y D++S G + E+ K
Sbjct: 188 YATPVDMWSVGCIFAEMFRRK 208
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 79/154 (51%), Gaps = 16/154 (10%)
Query: 346 VRHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNY 405
+ +N V+ + A K +L I E+ ++YD +H + ++ + + ++Y
Sbjct: 72 LERRNFVKPMTAVKKKSTLFIQMEYCENRTLYDLIHSENLNQQRDEYWRLFRQILEALSY 131
Query: 406 LHQNNIIHRDLKAANLLMDENEVVKVADFGVAR---------------VKAQSGVMTAET 450
+H IIHRDLK N+ +DE+ VK+ DFG+A+ + S +T+
Sbjct: 132 IHSQGIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSDNLTSAI 191
Query: 451 GTYRWMAPEVIEHKP-YDHKADVFSFGIVLWELL 483
GT ++A EV++ Y+ K D++S GI+ +E++
Sbjct: 192 GTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMI 225
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 98/199 (49%), Gaps = 11/199 (5%)
Query: 300 VASGSYGD--LYRGTYCSQDVAIKVL-KPERINSDMQKEFAQEVFIMRKVRHKNVVQFIG 356
+ G++G+ L R + A+K+L K E I F +E IM VVQ
Sbjct: 83 IGRGAFGEVQLVRHKASQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFC 142
Query: 357 ACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDL 416
A L +V E+M GG + + + K +V ++ +H +IHRD+
Sbjct: 143 AFQDDKYLYMVMEYMPGGDLVNLMSNYDVPEKWAKFYTA--EVVLALDAIHSMGLIHRDV 200
Query: 417 KAANLLMDENEVVKVADFGVARVKAQSGVMTAET--GTYRWMAPEVIEHKP----YDHKA 470
K N+L+D++ +K+ADFG ++G++ +T GT +++PEV++ + Y +
Sbjct: 201 KPDNMLLDKHGHLKLADFGTCMKMDETGMVHCDTAVGTPDYISPEVLKSQGGDGYYGREC 260
Query: 471 DVFSFGIVLWELLTGKLPY 489
D +S G+ L+E+L G P+
Sbjct: 261 DWWSVGVFLFEMLVGDTPF 279
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 35/104 (33%), Positives = 56/104 (53%), Gaps = 13/104 (12%)
Query: 393 LKVAIDVSKGMNYLHQNNIIHRDLKAANLLMDENEVVKVADFGVARVKAQS--------- 443
L + + +++ + +LH ++HRDLK +N+ ++VVKV DFG+ Q
Sbjct: 121 LHIFLQIAEAVEFLHSKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTP 180
Query: 444 ----GVMTAETGTYRWMAPEVIEHKPYDHKADVFSFGIVLWELL 483
T + GT +M+PE I Y HK D+FS G++L+ELL
Sbjct: 181 MPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELL 224
>pdb|2JBO|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (Crystal
Form-1, Soaking)
pdb|2JBP|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|B Chain B, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|C Chain C, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|D Chain D, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|E Chain E, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|F Chain F, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|G Chain G, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|H Chain H, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|I Chain I, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|J Chain J, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|K Chain K, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|L Chain L, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
Length = 326
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 40/131 (30%), Positives = 67/131 (51%), Gaps = 4/131 (3%)
Query: 363 SLCIVTEFMSGGSVYDYLH-KLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDLKAANL 421
L IV E + GG ++ + + F ++ + + + YLH NI HRD+K NL
Sbjct: 95 CLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENL 154
Query: 422 LMDE---NEVVKVADFGVARVKAQSGVMTAETGTYRWMAPEVIEHKPYDHKADVFSFGIV 478
L N ++K+ DFG A+ +T T ++APEV+ + YD D++S G++
Sbjct: 155 LYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVI 214
Query: 479 LWELLTGKLPY 489
++ LL G P+
Sbjct: 215 MYILLCGYPPF 225
>pdb|1KWP|A Chain A, Crystal Structure Of Mapkap2
pdb|1KWP|B Chain B, Crystal Structure Of Mapkap2
pdb|1NY3|A Chain A, Crystal Structure Of Adp Bound To Map Kap Kinase 2
Length = 400
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 40/131 (30%), Positives = 67/131 (51%), Gaps = 4/131 (3%)
Query: 363 SLCIVTEFMSGGSVYDYLH-KLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDLKAANL 421
L IV E + GG ++ + + F ++ + + + YLH NI HRD+K NL
Sbjct: 133 CLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENL 192
Query: 422 LMDE---NEVVKVADFGVARVKAQSGVMTAETGTYRWMAPEVIEHKPYDHKADVFSFGIV 478
L N ++K+ DFG A+ +T T ++APEV+ + YD D++S G++
Sbjct: 193 LYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVI 252
Query: 479 LWELLTGKLPY 489
++ LL G P+
Sbjct: 253 MYILLCGYPPF 263
>pdb|2PZY|A Chain A, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|B Chain B, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|C Chain C, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|D Chain D, Structure Of Mk2 Complexed With Compound 76
pdb|3KC3|A Chain A, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|B Chain B, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|C Chain C, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|D Chain D, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|E Chain E, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|F Chain F, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|G Chain G, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|H Chain H, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|I Chain I, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|J Chain J, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|K Chain K, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|L Chain L, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3A2C|A Chain A, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|B Chain B, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|C Chain C, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|D Chain D, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|E Chain E, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|F Chain F, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|G Chain G, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|H Chain H, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|I Chain I, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|J Chain J, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|K Chain K, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|L Chain L, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
Length = 324
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 40/131 (30%), Positives = 67/131 (51%), Gaps = 4/131 (3%)
Query: 363 SLCIVTEFMSGGSVYDYLH-KLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDLKAANL 421
L IV E + GG ++ + + F ++ + + + YLH NI HRD+K NL
Sbjct: 93 CLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENL 152
Query: 422 LMDE---NEVVKVADFGVARVKAQSGVMTAETGTYRWMAPEVIEHKPYDHKADVFSFGIV 478
L N ++K+ DFG A+ +T T ++APEV+ + YD D++S G++
Sbjct: 153 LYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVI 212
Query: 479 LWELLTGKLPY 489
++ LL G P+
Sbjct: 213 MYILLCGYPPF 223
>pdb|3R2B|A Chain A, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|B Chain B, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|C Chain C, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|D Chain D, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|E Chain E, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|F Chain F, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|G Chain G, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|H Chain H, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|I Chain I, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|J Chain J, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|K Chain K, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|L Chain L, Mk2 Kinase Bound To Compound 5b
Length = 318
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 40/131 (30%), Positives = 67/131 (51%), Gaps = 4/131 (3%)
Query: 363 SLCIVTEFMSGGSVYDYLH-KLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDLKAANL 421
L IV E + GG ++ + + F ++ + + + YLH NI HRD+K NL
Sbjct: 87 CLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENL 146
Query: 422 LMDE---NEVVKVADFGVARVKAQSGVMTAETGTYRWMAPEVIEHKPYDHKADVFSFGIV 478
L N ++K+ DFG A+ +T T ++APEV+ + YD D++S G++
Sbjct: 147 LYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVI 206
Query: 479 LWELLTGKLPY 489
++ LL G P+
Sbjct: 207 MYILLCGYPPF 217
>pdb|2ONL|C Chain C, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
Length = 406
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 40/131 (30%), Positives = 67/131 (51%), Gaps = 4/131 (3%)
Query: 363 SLCIVTEFMSGGSVYDYLH-KLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDLKAANL 421
L IV E + GG ++ + + F ++ + + + YLH NI HRD+K NL
Sbjct: 139 CLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENL 198
Query: 422 LMDE---NEVVKVADFGVARVKAQSGVMTAETGTYRWMAPEVIEHKPYDHKADVFSFGIV 478
L N ++K+ DFG A+ +T T ++APEV+ + YD D++S G++
Sbjct: 199 LYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVI 258
Query: 479 LWELLTGKLPY 489
++ LL G P+
Sbjct: 259 MYILLCGYPPF 269
>pdb|3FPM|A Chain A, Crystal Structure Of A Squarate Inhibitor Bound To Mapkap
Kinase-2
Length = 325
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 40/131 (30%), Positives = 67/131 (51%), Gaps = 4/131 (3%)
Query: 363 SLCIVTEFMSGGSVYDYLH-KLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDLKAANL 421
L IV E + GG ++ + + F ++ + + + YLH NI HRD+K NL
Sbjct: 94 CLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENL 153
Query: 422 LMDE---NEVVKVADFGVARVKAQSGVMTAETGTYRWMAPEVIEHKPYDHKADVFSFGIV 478
L N ++K+ DFG A+ +T T ++APEV+ + YD D++S G++
Sbjct: 154 LYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVI 213
Query: 479 LWELLTGKLPY 489
++ LL G P+
Sbjct: 214 MYILLCGYPPF 224
>pdb|3GOK|A Chain A, Binding Site Mapping Of Protein Ligands
pdb|3GOK|B Chain B, Binding Site Mapping Of Protein Ligands
pdb|3GOK|C Chain C, Binding Site Mapping Of Protein Ligands
pdb|3GOK|D Chain D, Binding Site Mapping Of Protein Ligands
pdb|3GOK|E Chain E, Binding Site Mapping Of Protein Ligands
pdb|3GOK|F Chain F, Binding Site Mapping Of Protein Ligands
pdb|3GOK|G Chain G, Binding Site Mapping Of Protein Ligands
pdb|3GOK|H Chain H, Binding Site Mapping Of Protein Ligands
pdb|3GOK|I Chain I, Binding Site Mapping Of Protein Ligands
pdb|3GOK|J Chain J, Binding Site Mapping Of Protein Ligands
pdb|3GOK|K Chain K, Binding Site Mapping Of Protein Ligands
pdb|3GOK|L Chain L, Binding Site Mapping Of Protein Ligands
Length = 334
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 40/131 (30%), Positives = 67/131 (51%), Gaps = 4/131 (3%)
Query: 363 SLCIVTEFMSGGSVYDYLH-KLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDLKAANL 421
L IV E + GG ++ + + F ++ + + + YLH NI HRD+K NL
Sbjct: 103 CLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENL 162
Query: 422 LMDE---NEVVKVADFGVARVKAQSGVMTAETGTYRWMAPEVIEHKPYDHKADVFSFGIV 478
L N ++K+ DFG A+ +T T ++APEV+ + YD D++S G++
Sbjct: 163 LYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVI 222
Query: 479 LWELLTGKLPY 489
++ LL G P+
Sbjct: 223 MYILLCGYPPF 233
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 37/104 (35%), Positives = 58/104 (55%), Gaps = 13/104 (12%)
Query: 393 LKVAIDVSKGMNYLHQNNIIHRDLKAANLLMDENEVVKVADFGVARVKAQ----SGVMT- 447
L + I +++ + +LH ++HRDLK +N+ ++VVKV DFG+ Q V+T
Sbjct: 167 LHIFIQIAEAVEFLHSKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTP 226
Query: 448 --------AETGTYRWMAPEVIEHKPYDHKADVFSFGIVLWELL 483
+ GT +M+PE I Y HK D+FS G++L+ELL
Sbjct: 227 MPAYATHXGQVGTKLYMSPEQIHGNNYSHKVDIFSLGLILFELL 270
>pdb|2P3G|X Chain X, Crystal Structure Of A Pyrrolopyridine Inhibitor Bound To
Mapkap Kinase-2
pdb|3FYJ|X Chain X, Crystal Structure Of An Optimzied Benzothiophene Inhibitor
Bound To Mapkap Kinase-2 (Mk-2)
pdb|3FYK|X Chain X, Crystal Structure Of A Benzthiophene Lead Bound To Mapkap
Kinase-2 (Mk-2)
Length = 327
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 40/131 (30%), Positives = 67/131 (51%), Gaps = 4/131 (3%)
Query: 363 SLCIVTEFMSGGSVYDYLH-KLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDLKAANL 421
L IV E + GG ++ + + F ++ + + + YLH NI HRD+K NL
Sbjct: 89 CLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENL 148
Query: 422 LMDE---NEVVKVADFGVARVKAQSGVMTAETGTYRWMAPEVIEHKPYDHKADVFSFGIV 478
L N ++K+ DFG A+ +T T ++APEV+ + YD D++S G++
Sbjct: 149 LYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVI 208
Query: 479 LWELLTGKLPY 489
++ LL G P+
Sbjct: 209 MYILLCGYPPF 219
>pdb|2OZA|A Chain A, Structure Of P38alpha Complex
Length = 356
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 40/131 (30%), Positives = 67/131 (51%), Gaps = 4/131 (3%)
Query: 363 SLCIVTEFMSGGSVYDYLH-KLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDLKAANL 421
L IV E + GG ++ + + F ++ + + + YLH NI HRD+K NL
Sbjct: 89 CLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENL 148
Query: 422 LMDE---NEVVKVADFGVARVKAQSGVMTAETGTYRWMAPEVIEHKPYDHKADVFSFGIV 478
L N ++K+ DFG A+ +T T ++APEV+ + YD D++S G++
Sbjct: 149 LYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVI 208
Query: 479 LWELLTGKLPY 489
++ LL G P+
Sbjct: 209 MYILLCGYPPF 219
>pdb|3R2Y|A Chain A, Mk2 Kinase Bound To Compound 1
pdb|3R30|A Chain A, Mk2 Kinase Bound To Compound 2
Length = 319
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 40/131 (30%), Positives = 67/131 (51%), Gaps = 4/131 (3%)
Query: 363 SLCIVTEFMSGGSVYDYLH-KLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDLKAANL 421
L IV E + GG ++ + + F ++ + + + YLH NI HRD+K NL
Sbjct: 88 CLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENL 147
Query: 422 LMDE---NEVVKVADFGVARVKAQSGVMTAETGTYRWMAPEVIEHKPYDHKADVFSFGIV 478
L N ++K+ DFG A+ +T T ++APEV+ + YD D++S G++
Sbjct: 148 LYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVI 207
Query: 479 LWELLTGKLPY 489
++ LL G P+
Sbjct: 208 MYILLCGYPPF 218
>pdb|3KA0|A Chain A, Mk2 Complex With Inhibitor
6-(5-(2-Aminopyrimidin-4-Ylamino)-2-
Hydroxyphenyl)-N-Methylbenzo[b]thiophene-2-Carboxamide
Length = 320
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 40/131 (30%), Positives = 67/131 (51%), Gaps = 4/131 (3%)
Query: 363 SLCIVTEFMSGGSVYDYLH-KLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDLKAANL 421
L IV E + GG ++ + + F ++ + + + YLH NI HRD+K NL
Sbjct: 87 CLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENL 146
Query: 422 LMDE---NEVVKVADFGVARVKAQSGVMTAETGTYRWMAPEVIEHKPYDHKADVFSFGIV 478
L N ++K+ DFG A+ +T T ++APEV+ + YD D++S G++
Sbjct: 147 LYTSKRPNAILKLTDFGFAKETTSHNSLTEPCYTPYYVAPEVLGPEKYDKSCDMWSLGVI 206
Query: 479 LWELLTGKLPY 489
++ LL G P+
Sbjct: 207 MYILLCGYPPF 217
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 97/201 (48%), Gaps = 15/201 (7%)
Query: 300 VASGSYGD--LYRGTYCSQDVAIKVL-KPERINSDMQKEFAQEVFIMRKVRHKNVVQFIG 356
+ G++G+ L R + A+K+L K E I F +E IM VVQ
Sbjct: 82 IGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFY 141
Query: 357 ACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLK--VAIDVSKGMNYLHQNNIIHR 414
A L +V E+M GG L L + +P +V ++ +H IHR
Sbjct: 142 AFQDDRYLYMVMEYMPGGD----LVNLMSNYDVPEKWARFYTAEVVLALDAIHSMGFIHR 197
Query: 415 DLKAANLLMDENEVVKVADFGVARVKAQSGVMTAET--GTYRWMAPEVIEHKP----YDH 468
D+K N+L+D++ +K+ADFG + G++ +T GT +++PEV++ + Y
Sbjct: 198 DVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGR 257
Query: 469 KADVFSFGIVLWELLTGKLPY 489
+ D +S G+ L+E+L G P+
Sbjct: 258 ECDWWSVGVFLYEMLVGDTPF 278
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 51/198 (25%), Positives = 94/198 (47%), Gaps = 20/198 (10%)
Query: 299 KVASGSYGDLY--RGTYCSQDVAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQFIG 356
K+ G+YG +Y R + VA+K ++ + + +E+ +++++ H N+V+ +
Sbjct: 13 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLD 72
Query: 357 ACTKPPSLCIVTE--------FMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQ 408
L +V E FM + L G+ LP + + +G+ + H
Sbjct: 73 VIHTENKLYLVFEHVDQDLKKFMDASA-------LTGI-PLPLIKSYLFQLLQGLAFCHS 124
Query: 409 NNIIHRDLKAANLLMDENEVVKVADFGVARV-KAQSGVMTAETGTYRWMAPEV-IEHKPY 466
+ ++HRDLK NLL++ +K+ADFG+AR E T + APE+ + K Y
Sbjct: 125 HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYY 184
Query: 467 DHKADVFSFGIVLWELLT 484
D++S G + E++T
Sbjct: 185 STAVDIWSLGCIFAEMVT 202
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 97/201 (48%), Gaps = 15/201 (7%)
Query: 300 VASGSYGD--LYRGTYCSQDVAIKVL-KPERINSDMQKEFAQEVFIMRKVRHKNVVQFIG 356
+ G++G+ L R + A+K+L K E I F +E IM VVQ
Sbjct: 77 IGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFY 136
Query: 357 ACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLK--VAIDVSKGMNYLHQNNIIHR 414
A L +V E+M GG L L + +P +V ++ +H IHR
Sbjct: 137 AFQDDRYLYMVMEYMPGGD----LVNLMSNYDVPEKWARFYTAEVVLALDAIHSMGFIHR 192
Query: 415 DLKAANLLMDENEVVKVADFGVARVKAQSGVMTAET--GTYRWMAPEVIEHKP----YDH 468
D+K N+L+D++ +K+ADFG + G++ +T GT +++PEV++ + Y
Sbjct: 193 DVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGR 252
Query: 469 KADVFSFGIVLWELLTGKLPY 489
+ D +S G+ L+E+L G P+
Sbjct: 253 ECDWWSVGVFLYEMLVGDTPF 273
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 98/204 (48%), Gaps = 17/204 (8%)
Query: 298 SKVASGSYGDLY--RGTYCSQDVAIKVLK---PERINSDMQKEFAQEVFIMRKVR---HK 349
+++ G+YG +Y R + VA+K ++ + +EV ++R++ H
Sbjct: 15 AEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEAFEHP 74
Query: 350 NVVQFIGACT-----KPPSLCIVTEFMSGGSVYDYLHKLKGVFKLP--SLLKVAIDVSKG 402
NVV+ + C + + +V E + + YL K LP ++ + +G
Sbjct: 75 NVVRLMDVCATSRTDREIKVTLVFEHVDQ-DLRTYLDKAPPP-GLPAETIKDLMRQFLRG 132
Query: 403 MNYLHQNNIIHRDLKAANLLMDENEVVKVADFGVARVKAQSGVMTAETGTYRWMAPEVIE 462
+++LH N I+HRDLK N+L+ VK+ADFG+AR+ + +T T + APEV+
Sbjct: 133 LDFLHANCIVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALTPVVVTLWYRAPEVLL 192
Query: 463 HKPYDHKADVFSFGIVLWELLTGK 486
Y D++S G + E+ K
Sbjct: 193 QSTYATPVDMWSVGCIFAEMFRRK 216
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 72.0 bits (175), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 97/201 (48%), Gaps = 15/201 (7%)
Query: 300 VASGSYGD--LYRGTYCSQDVAIKVL-KPERINSDMQKEFAQEVFIMRKVRHKNVVQFIG 356
+ G++G+ L R + A+K+L K E I F +E IM VVQ
Sbjct: 82 IGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFY 141
Query: 357 ACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLK--VAIDVSKGMNYLHQNNIIHR 414
A L +V E+M GG L L + +P +V ++ +H IHR
Sbjct: 142 AFQDDRYLYMVMEYMPGGD----LVNLMSNYDVPEKWARFYTAEVVLALDAIHSMGFIHR 197
Query: 415 DLKAANLLMDENEVVKVADFGVARVKAQSGVMTAET--GTYRWMAPEVIEHKP----YDH 468
D+K N+L+D++ +K+ADFG + G++ +T GT +++PEV++ + Y
Sbjct: 198 DVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGR 257
Query: 469 KADVFSFGIVLWELLTGKLPY 489
+ D +S G+ L+E+L G P+
Sbjct: 258 ECDWWSVGVFLYEMLVGDTPF 278
>pdb|1YXS|A Chain A, Crystal Structure Of Kinase Pim1 With P123m Mutation
Length = 293
Score = 72.0 bits (175), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 105/208 (50%), Gaps = 13/208 (6%)
Query: 295 KFGSKVASGSYGDLYRGTYCSQD--VAIKVLKPERINSDMQ----KEFAQEVFIMRKVR- 347
+ G + SG +G +Y G S + VAIK ++ +RI+ + EV +++KV
Sbjct: 11 QVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSS 70
Query: 348 -HKNVVQFIGACTKPPSLCIVTEFMSG-GSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNY 405
V++ + +P S ++ E M ++D++ + +G + V + + +
Sbjct: 71 GFSGVIRLLDWFERPDSFVLILERMEPVQDLFDFITE-RGALQEELARSFFWQVLEAVRH 129
Query: 406 LHQNNIIHRDLKAANLLMDENE-VVKVADFGVARVKAQSGVMTAETGTYRWMAPEVIE-H 463
H ++HRD+K N+L+D N +K+ DFG + + V T GT + PE I H
Sbjct: 130 CHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT-VYTDFDGTRVYSPPEWIRYH 188
Query: 464 KPYDHKADVFSFGIVLWELLTGKLPYEY 491
+ + A V+S GI+L++++ G +P+E+
Sbjct: 189 RYHGRSAAVWSLGILLYDMVCGDIPFEH 216
>pdb|1NXK|A Chain A, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|B Chain B, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|C Chain C, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|D Chain D, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
Length = 400
Score = 72.0 bits (175), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 40/131 (30%), Positives = 65/131 (49%), Gaps = 4/131 (3%)
Query: 363 SLCIVTEFMSGGSVYDYLH-KLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDLKAANL 421
L IV E + GG ++ + + F ++ + + + YLH NI HRD+K NL
Sbjct: 133 CLLIVXECLDGGELFSRIQDRGDQAFTEREASEIXKSIGEAIQYLHSINIAHRDVKPENL 192
Query: 422 LMDE---NEVVKVADFGVARVKAQSGVMTAETGTYRWMAPEVIEHKPYDHKADVFSFGIV 478
L N ++K+ DFG A+ +T T ++APEV+ + YD D +S G++
Sbjct: 193 LYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDXWSLGVI 252
Query: 479 LWELLTGKLPY 489
+ LL G P+
Sbjct: 253 XYILLCGYPPF 263
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 71.6 bits (174), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 43/185 (23%), Positives = 95/185 (51%), Gaps = 17/185 (9%)
Query: 315 SQDVAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQFIGACTKPPSLCIVTEFMSGG 374
Q+ A ++ +++++ ++ +E I R ++H N+V+ + ++ ++ + ++GG
Sbjct: 36 GQEYAAMIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDSISEEGHHYLIFDLVTGG 95
Query: 375 SVYD------YLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDLKAANLLMD---E 425
+++ Y + + +L+ + + HQ ++HR+LK NLL+ +
Sbjct: 96 ELFEDIVAREYYSEADASHCIQQILEAVL-------HCHQMGVVHRNLKPENLLLASKLK 148
Query: 426 NEVVKVADFGVA-RVKAQSGVMTAETGTYRWMAPEVIEHKPYDHKADVFSFGIVLWELLT 484
VK+ADFG+A V+ + GT +++PEV+ PY D+++ G++L+ LL
Sbjct: 149 GAAVKLADFGLAIEVEGEQQAWFGFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLV 208
Query: 485 GKLPY 489
G P+
Sbjct: 209 GYPPF 213
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 48/205 (23%), Positives = 102/205 (49%), Gaps = 27/205 (13%)
Query: 305 YGDLYRGTY---------CS-QDVAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQF 354
Y D+ +G + C+ + A K++ +++++ ++ +E I R ++H N+V+
Sbjct: 9 YEDIGKGAFSVVRRCVKLCTGHEYAAKIINTKKLSARDHQKLEREARICRLLKHSNIVRL 68
Query: 355 IGACTKPPSLCIVTEFMSGGSVYD------YLHKLKGVFKLPSLLKVAIDVSKGMNYLHQ 408
+ ++ +V + ++GG +++ Y + + +L+ + + HQ
Sbjct: 69 HDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIQQILEAVL-------HCHQ 121
Query: 409 NNIIHRDLKAANLLMD---ENEVVKVADFGVA-RVKAQSGVMTAETGTYRWMAPEVIEHK 464
++HRDLK NLL+ + VK+ADFG+A V+ GT +++PEV+ +
Sbjct: 122 MGVVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGDQQAWFGFAGTPGYLSPEVLRKE 181
Query: 465 PYDHKADVFSFGIVLWELLTGKLPY 489
Y D+++ G++L+ LL G P+
Sbjct: 182 AYGKPVDIWACGVILYILLVGYPPF 206
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 49/158 (31%), Positives = 81/158 (51%), Gaps = 17/158 (10%)
Query: 348 HKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLH 407
+KN+++ I +V E + GGS+ ++ K K F +V DV+ +++LH
Sbjct: 70 NKNILELIEFFEDDTRFYLVFEKLQGGSILAHIQKQKH-FNEREASRVVRDVAAALDFLH 128
Query: 408 QNNIIHRDLKAANLLMDENEV---VKVADF----GVARVKAQSGVMTAE----TGTYRWM 456
I HRDLK N+L + E VK+ DF G+ + + + T E G+ +M
Sbjct: 129 TKGIAHRDLKPENILCESPEKVSPVKICDFDLGSGMKLNNSCTPITTPELTTPCGSAEYM 188
Query: 457 APEVIE-----HKPYDHKADVFSFGIVLWELLTGKLPY 489
APEV+E YD + D++S G+VL+ +L+G P+
Sbjct: 189 APEVVEVFTDQATFYDKRCDLWSLGVVLYIMLSGYPPF 226
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 76/154 (49%), Gaps = 16/154 (10%)
Query: 346 VRHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNY 405
+ +N V+ A K +L I E+ ++YD +H + ++ + + ++Y
Sbjct: 72 LERRNFVKPXTAVKKKSTLFIQXEYCENRTLYDLIHSENLNQQRDEYWRLFRQILEALSY 131
Query: 406 LHQNNIIHRDLKAANLLMDENEVVKVADFGVAR---------------VKAQSGVMTAET 450
+H IIHR+LK N+ +DE+ VK+ DFG+A+ + S +T+
Sbjct: 132 IHSQGIIHRNLKPXNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSDNLTSAI 191
Query: 451 GTYRWMAPEVIEHKP-YDHKADVFSFGIVLWELL 483
GT ++A EV++ Y+ K D +S GI+ +E +
Sbjct: 192 GTAXYVATEVLDGTGHYNEKIDXYSLGIIFFEXI 225
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 63/229 (27%), Positives = 104/229 (45%), Gaps = 12/229 (5%)
Query: 287 WEIDPKHLKFGSKVASGSYG--DLYRGTYCSQDVAIKVLKPERINSDMQKEFAQEVFI-M 343
+E+ L+ ++ G+YG + R Q A+K ++ +NS QK ++ I
Sbjct: 29 FEVKADDLEPIXELGRGAYGVVEKXRHVPSGQIXAVKRIR-ATVNSQEQKRLLXDLDISX 87
Query: 344 RKVRHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPS--LLKVAIDVSK 401
R V V F GA + + I E Y + +P L K+A+ + K
Sbjct: 88 RTVDCPFTVTFYGALFREGDVWICXELXDTSLDKFYKQVIDKGQTIPEDILGKIAVSIVK 147
Query: 402 GMNYLHQN-NIIHRDLKAANLLMDENEVVKVADFGVARVKAQSGVMTAETGTYRWMAPEV 460
+ +LH ++IHRD+K +N+L++ VK DFG++ + G + APE
Sbjct: 148 ALEHLHSKLSVIHRDVKPSNVLINALGQVKXCDFGISGYLVDDVAKDIDAGCKPYXAPER 207
Query: 461 I----EHKPYDHKADVFSFGIVLWELLTGKLPYE-YLTPLQAAVGVVQK 504
I K Y K+D++S GI EL + PY+ + TP Q VV++
Sbjct: 208 INPELNQKGYSVKSDIWSLGITXIELAILRFPYDSWGTPFQQLKQVVEE 256
>pdb|3JPV|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Pyrrolo[2,3- A]carbazole Ligand
pdb|3QF9|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Furan- Thiazolidinedione Ligand
pdb|4GW8|A Chain A, Human Proto-Oncogene Serine Threonine Kinase (Pim1) In
Complex With A Consensus Peptide And Leucettine L41
Length = 313
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 104/208 (50%), Gaps = 13/208 (6%)
Query: 295 KFGSKVASGSYGDLYRGTYCSQD--VAIKVLKPERINSDMQ----KEFAQEVFIMRKVR- 347
+ G + SG +G +Y G S + VAIK ++ +RI+ + EV +++KV
Sbjct: 40 QVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSS 99
Query: 348 -HKNVVQFIGACTKPPSLCIVTEFMSG-GSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNY 405
V++ + +P S ++ E ++D++ + +G + V + + +
Sbjct: 100 GFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITE-RGALQEELARSFFWQVLEAVRH 158
Query: 406 LHQNNIIHRDLKAANLLMDENEV-VKVADFGVARVKAQSGVMTAETGTYRWMAPEVIE-H 463
H ++HRD+K N+L+D N +K+ DFG + + V T GT + PE I H
Sbjct: 159 CHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT-VYTDFDGTRVYSPPEWIRYH 217
Query: 464 KPYDHKADVFSFGIVLWELLTGKLPYEY 491
+ + A V+S GI+L++++ G +P+E+
Sbjct: 218 RYHGRSAAVWSLGILLYDMVCGDIPFEH 245
>pdb|1XQZ|A Chain A, Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolution
pdb|1XR1|A Chain A, Crystal Structure Of Hpim-1 Kinase In Complex With Amp-Pnp
At 2.1 A Resolution
Length = 300
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 104/208 (50%), Gaps = 13/208 (6%)
Query: 295 KFGSKVASGSYGDLYRGTYCSQD--VAIKVLKPERINSDMQ----KEFAQEVFIMRKVR- 347
+ G + SG +G +Y G S + VAIK ++ +RI+ + EV +++KV
Sbjct: 26 QVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSS 85
Query: 348 -HKNVVQFIGACTKPPSLCIVTEFMSG-GSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNY 405
V++ + +P S ++ E ++D++ + +G + V + + +
Sbjct: 86 GFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITE-RGALQEELARSFFWQVLEAVRH 144
Query: 406 LHQNNIIHRDLKAANLLMDENEV-VKVADFGVARVKAQSGVMTAETGTYRWMAPEVIE-H 463
H ++HRD+K N+L+D N +K+ DFG + + V T GT + PE I H
Sbjct: 145 CHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT-VYTDFDGTRVYSPPEWIRYH 203
Query: 464 KPYDHKADVFSFGIVLWELLTGKLPYEY 491
+ + A V+S GI+L++++ G +P+E+
Sbjct: 204 RYHGRSAAVWSLGILLYDMVCGDIPFEH 231
>pdb|3F2A|A Chain A, Crystal Structure Of Human Pim-1 In Complex With Dappa
Length = 300
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 104/208 (50%), Gaps = 13/208 (6%)
Query: 295 KFGSKVASGSYGDLYRGTYCSQD--VAIKVLKPERINSDMQ----KEFAQEVFIMRKVR- 347
+ G + SG +G +Y G S + VAIK ++ +RI+ + EV +++KV
Sbjct: 26 QVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSS 85
Query: 348 -HKNVVQFIGACTKPPSLCIVTEFMSG-GSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNY 405
V++ + +P S ++ E ++D++ + +G + V + + +
Sbjct: 86 GFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITE-RGALQEELARSFFWQVLEAVRH 144
Query: 406 LHQNNIIHRDLKAANLLMDENE-VVKVADFGVARVKAQSGVMTAETGTYRWMAPEVIE-H 463
H ++HRD+K N+L+D N +K+ DFG + + V T GT + PE I H
Sbjct: 145 CHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT-VYTDFDGTRVYSPPEWIRYH 203
Query: 464 KPYDHKADVFSFGIVLWELLTGKLPYEY 491
+ + A V+S GI+L++++ G +P+E+
Sbjct: 204 RYHGRSAAVWSLGILLYDMVCGDIPFEH 231
>pdb|3CXW|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand I
pdb|3CY2|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand Ii
Length = 314
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 104/208 (50%), Gaps = 13/208 (6%)
Query: 295 KFGSKVASGSYGDLYRGTYCSQD--VAIKVLKPERINSDMQ----KEFAQEVFIMRKVR- 347
+ G + SG +G +Y G S + VAIK ++ +RI+ + EV +++KV
Sbjct: 40 QVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSS 99
Query: 348 -HKNVVQFIGACTKPPSLCIVTEFMSG-GSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNY 405
V++ + +P S ++ E ++D++ + +G + V + + +
Sbjct: 100 GFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITE-RGALQEELARSFFWQVLEAVRH 158
Query: 406 LHQNNIIHRDLKAANLLMDENEV-VKVADFGVARVKAQSGVMTAETGTYRWMAPEVIE-H 463
H ++HRD+K N+L+D N +K+ DFG + + V T GT + PE I H
Sbjct: 159 CHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT-VYTDFDGTRVYSPPEWIRYH 217
Query: 464 KPYDHKADVFSFGIVLWELLTGKLPYEY 491
+ + A V+S GI+L++++ G +P+E+
Sbjct: 218 RYHGRSAAVWSLGILLYDMVCGDIPFEH 245
>pdb|1XWS|A Chain A, Crystal Structure Of The Human Pim1 Kinase Domain
Length = 313
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 104/208 (50%), Gaps = 13/208 (6%)
Query: 295 KFGSKVASGSYGDLYRGTYCSQD--VAIKVLKPERINSDMQ----KEFAQEVFIMRKVR- 347
+ G + SG +G +Y G S + VAIK ++ +RI+ + EV +++KV
Sbjct: 39 QVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSS 98
Query: 348 -HKNVVQFIGACTKPPSLCIVTEFMSG-GSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNY 405
V++ + +P S ++ E ++D++ + +G + V + + +
Sbjct: 99 GFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITE-RGALQEELARSFFWQVLEAVRH 157
Query: 406 LHQNNIIHRDLKAANLLMDENEV-VKVADFGVARVKAQSGVMTAETGTYRWMAPEVIE-H 463
H ++HRD+K N+L+D N +K+ DFG + + V T GT + PE I H
Sbjct: 158 CHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT-VYTDFDGTRVYSPPEWIRYH 216
Query: 464 KPYDHKADVFSFGIVLWELLTGKLPYEY 491
+ + A V+S GI+L++++ G +P+E+
Sbjct: 217 RYHGRSAAVWSLGILLYDMVCGDIPFEH 244
>pdb|3MA3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Naphtho-Difuran Ligand
Length = 313
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 104/208 (50%), Gaps = 13/208 (6%)
Query: 295 KFGSKVASGSYGDLYRGTYCSQD--VAIKVLKPERINSDMQ----KEFAQEVFIMRKVR- 347
+ G + SG +G +Y G S + VAIK ++ +RI+ + EV +++KV
Sbjct: 40 QVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSS 99
Query: 348 -HKNVVQFIGACTKPPSLCIVTEFMSG-GSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNY 405
V++ + +P S ++ E ++D++ + +G + V + + +
Sbjct: 100 GFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITE-RGALQEELARSFFWQVLEAVRH 158
Query: 406 LHQNNIIHRDLKAANLLMDENEV-VKVADFGVARVKAQSGVMTAETGTYRWMAPEVIE-H 463
H ++HRD+K N+L+D N +K+ DFG + + V T GT + PE I H
Sbjct: 159 CHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT-VYTDFDGTRVYSPPEWIRYH 217
Query: 464 KPYDHKADVFSFGIVLWELLTGKLPYEY 491
+ + A V+S GI+L++++ G +P+E+
Sbjct: 218 RYHGRSAAVWSLGILLYDMVCGDIPFEH 245
>pdb|2J2I|B Chain B, Crystal Structure Of The Humab Pim1 In Complex With
Ly333531
Length = 312
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 104/208 (50%), Gaps = 13/208 (6%)
Query: 295 KFGSKVASGSYGDLYRGTYCSQD--VAIKVLKPERINSDMQ----KEFAQEVFIMRKVR- 347
+ G + SG +G +Y G S + VAIK ++ +RI+ + EV +++KV
Sbjct: 39 QVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSS 98
Query: 348 -HKNVVQFIGACTKPPSLCIVTEFMSG-GSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNY 405
V++ + +P S ++ E ++D++ + +G + V + + +
Sbjct: 99 GFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITE-RGALQEELARSFFWQVLEAVRH 157
Query: 406 LHQNNIIHRDLKAANLLMDENEV-VKVADFGVARVKAQSGVMTAETGTYRWMAPEVIE-H 463
H ++HRD+K N+L+D N +K+ DFG + + V T GT + PE I H
Sbjct: 158 CHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT-VYTDFDGTRVYSPPEWIRYH 216
Query: 464 KPYDHKADVFSFGIVLWELLTGKLPYEY 491
+ + A V+S GI+L++++ G +P+E+
Sbjct: 217 RYHGRSAAVWSLGILLYDMVCGDIPFEH 244
>pdb|2BIL|B Chain B, The Human Protein Kinase Pim1 In Complex With Its
Consensus Peptide Pimtide
pdb|2BZJ|A Chain A, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru3
pdb|2BZK|B Chain B, Crystal Structure Of The Human Pim1 In Complex With Amppnp
And Pimtide
pdb|2C3I|B Chain B, Crystal Structure Of Human Pim1 In Complex With
Imidazopyridazin I
pdb|2BZH|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2OI4|X Chain X, Crystal Structure Of Human Pim1 In Complex With
Fluorinated Ruthenium Pyridocarbazole
pdb|3BWF|A Chain A, Crystal Structure Of The Human Pim1 In Complex With An
Osmium Compound
Length = 313
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 104/208 (50%), Gaps = 13/208 (6%)
Query: 295 KFGSKVASGSYGDLYRGTYCSQD--VAIKVLKPERINSDMQ----KEFAQEVFIMRKVR- 347
+ G + SG +G +Y G S + VAIK ++ +RI+ + EV +++KV
Sbjct: 39 QVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSS 98
Query: 348 -HKNVVQFIGACTKPPSLCIVTEFMSG-GSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNY 405
V++ + +P S ++ E ++D++ + +G + V + + +
Sbjct: 99 GFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITE-RGALQEELARSFFWQVLEAVRH 157
Query: 406 LHQNNIIHRDLKAANLLMDENEV-VKVADFGVARVKAQSGVMTAETGTYRWMAPEVIE-H 463
H ++HRD+K N+L+D N +K+ DFG + + V T GT + PE I H
Sbjct: 158 CHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT-VYTDFDGTRVYSPPEWIRYH 216
Query: 464 KPYDHKADVFSFGIVLWELLTGKLPYEY 491
+ + A V+S GI+L++++ G +P+E+
Sbjct: 217 RYHGRSAAVWSLGILLYDMVCGDIPFEH 244
>pdb|3CY3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And
The Jnk Inhibitor V
Length = 314
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 104/208 (50%), Gaps = 13/208 (6%)
Query: 295 KFGSKVASGSYGDLYRGTYCSQD--VAIKVLKPERINSDMQ----KEFAQEVFIMRKVR- 347
+ G + SG +G +Y G S + VAIK ++ +RI+ + EV +++KV
Sbjct: 40 QVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSS 99
Query: 348 -HKNVVQFIGACTKPPSLCIVTEFMSG-GSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNY 405
V++ + +P S ++ E ++D++ + +G + V + + +
Sbjct: 100 GFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITE-RGALQEELARSFFWQVLEAVRH 158
Query: 406 LHQNNIIHRDLKAANLLMDENEV-VKVADFGVARVKAQSGVMTAETGTYRWMAPEVIE-H 463
H ++HRD+K N+L+D N +K+ DFG + + V T GT + PE I H
Sbjct: 159 CHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT-VYTDFDGTRVYSPPEWIRYH 217
Query: 464 KPYDHKADVFSFGIVLWELLTGKLPYEY 491
+ + A V+S GI+L++++ G +P+E+
Sbjct: 218 RYHGRSAAVWSLGILLYDMVCGDIPFEH 245
>pdb|4ALV|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
pdb|4ALW|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 104/208 (50%), Gaps = 13/208 (6%)
Query: 295 KFGSKVASGSYGDLYRGTYCSQD--VAIKVLKPERINSDMQ----KEFAQEVFIMRKVR- 347
+ G + SG +G +Y G S + VAIK ++ +RI+ + EV +++KV
Sbjct: 54 QVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSS 113
Query: 348 -HKNVVQFIGACTKPPSLCIVTEFMSG-GSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNY 405
V++ + +P S ++ E ++D++ + +G + V + + +
Sbjct: 114 GFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITE-RGALQEELARSFFWQVLEAVRH 172
Query: 406 LHQNNIIHRDLKAANLLMDENEV-VKVADFGVARVKAQSGVMTAETGTYRWMAPEVIE-H 463
H ++HRD+K N+L+D N +K+ DFG + + V T GT + PE I H
Sbjct: 173 CHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT-VYTDFDGTRVYSPPEWIRYH 231
Query: 464 KPYDHKADVFSFGIVLWELLTGKLPYEY 491
+ + A V+S GI+L++++ G +P+E+
Sbjct: 232 RYHGRSAAVWSLGILLYDMVCGDIPFEH 259
>pdb|3DCV|A Chain A, Crystal Structure Of Human Pim1 Kinase Complexed With
4-(4-
Hydroxy-3-Methyl-Phenyl)-6-Phenylpyrimidin-2(1h)-One
pdb|3T9I|A Chain A, Pim1 Complexed With A Novel 3,6-Disubstituted Indole At
2.6 Ang Resolution
Length = 328
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 104/208 (50%), Gaps = 13/208 (6%)
Query: 295 KFGSKVASGSYGDLYRGTYCSQD--VAIKVLKPERINSDMQ----KEFAQEVFIMRKVR- 347
+ G + SG +G +Y G S + VAIK ++ +RI+ + EV +++KV
Sbjct: 54 QVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSS 113
Query: 348 -HKNVVQFIGACTKPPSLCIVTEFMSG-GSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNY 405
V++ + +P S ++ E ++D++ + +G + V + + +
Sbjct: 114 GFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITE-RGALQEELARSFFWQVLEAVRH 172
Query: 406 LHQNNIIHRDLKAANLLMDENEV-VKVADFGVARVKAQSGVMTAETGTYRWMAPEVIE-H 463
H ++HRD+K N+L+D N +K+ DFG + + V T GT + PE I H
Sbjct: 173 CHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT-VYTDFDGTRVYSPPEWIRYH 231
Query: 464 KPYDHKADVFSFGIVLWELLTGKLPYEY 491
+ + A V+S GI+L++++ G +P+E+
Sbjct: 232 RYHGRSAAVWSLGILLYDMVCGDIPFEH 259
>pdb|2XIX|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-1 From
Crystallographic Fragment Screen
Length = 301
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 104/208 (50%), Gaps = 13/208 (6%)
Query: 295 KFGSKVASGSYGDLYRGTYCSQD--VAIKVLKPERINSDMQ----KEFAQEVFIMRKVR- 347
+ G + SG +G +Y G S + VAIK ++ +RI+ + EV +++KV
Sbjct: 27 QVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSS 86
Query: 348 -HKNVVQFIGACTKPPSLCIVTEFMSG-GSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNY 405
V++ + +P S ++ E ++D++ + +G + V + + +
Sbjct: 87 GFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITE-RGALQEELARSFFWQVLEAVRH 145
Query: 406 LHQNNIIHRDLKAANLLMDENEV-VKVADFGVARVKAQSGVMTAETGTYRWMAPEVIE-H 463
H ++HRD+K N+L+D N +K+ DFG + + V T GT + PE I H
Sbjct: 146 CHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT-VYTDFDGTRVYSPPEWIRYH 204
Query: 464 KPYDHKADVFSFGIVLWELLTGKLPYEY 491
+ + A V+S GI+L++++ G +P+E+
Sbjct: 205 RYHGRSAAVWSLGILLYDMVCGDIPFEH 232
>pdb|2OBJ|A Chain A, Crystal Structure Of Human Pim-1 Kinase In Complex With
Inhibitor
pdb|3BGP|A Chain A, Human Pim-1 Complexed With A Benzoisoxazole Inhibitor Vx1
pdb|3BGQ|A Chain A, Human Pim-1 Kinase In Complex With An Triazolo Pyridazine
Inhibitor Vx2
pdb|3BGZ|A Chain A, Human Pim-1 Kinase In Complex With Diphenyl Indole
Inhibitor Vx3
Length = 333
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 104/208 (50%), Gaps = 13/208 (6%)
Query: 295 KFGSKVASGSYGDLYRGTYCSQD--VAIKVLKPERINSDMQ----KEFAQEVFIMRKVR- 347
+ G + SG +G +Y G S + VAIK ++ +RI+ + EV +++KV
Sbjct: 59 QVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSS 118
Query: 348 -HKNVVQFIGACTKPPSLCIVTEFMSG-GSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNY 405
V++ + +P S ++ E ++D++ + +G + V + + +
Sbjct: 119 GFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITE-RGALQEELARSFFWQVLEAVRH 177
Query: 406 LHQNNIIHRDLKAANLLMDENEV-VKVADFGVARVKAQSGVMTAETGTYRWMAPEVIE-H 463
H ++HRD+K N+L+D N +K+ DFG + + V T GT + PE I H
Sbjct: 178 CHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT-VYTDFDGTRVYSPPEWIRYH 236
Query: 464 KPYDHKADVFSFGIVLWELLTGKLPYEY 491
+ + A V+S GI+L++++ G +P+E+
Sbjct: 237 RYHGRSAAVWSLGILLYDMVCGDIPFEH 264
>pdb|2BIK|B Chain B, Human Pim1 Phosphorylated On Ser261
pdb|2BZI|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru2
Length = 313
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 104/208 (50%), Gaps = 13/208 (6%)
Query: 295 KFGSKVASGSYGDLYRGTYCSQD--VAIKVLKPERINSDMQ----KEFAQEVFIMRKVR- 347
+ G + SG +G +Y G S + VAIK ++ +RI+ + EV +++KV
Sbjct: 39 QVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSS 98
Query: 348 -HKNVVQFIGACTKPPSLCIVTEFMSG-GSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNY 405
V++ + +P S ++ E ++D++ + +G + V + + +
Sbjct: 99 GFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITE-RGALQEELARSFFWQVLEAVRH 157
Query: 406 LHQNNIIHRDLKAANLLMDENEV-VKVADFGVARVKAQSGVMTAETGTYRWMAPEVIE-H 463
H ++HRD+K N+L+D N +K+ DFG + + V T GT + PE I H
Sbjct: 158 CHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT-VYTDFDGTRVYSPPEWIRYH 216
Query: 464 KPYDHKADVFSFGIVLWELLTGKLPYEY 491
+ + A V+S GI+L++++ G +P+E+
Sbjct: 217 RYHGRSAAVWSLGILLYDMVCGDIPFEH 244
>pdb|1YHS|A Chain A, Crystal Structure Of Pim-1 Bound To Staurosporine
pdb|1YI3|A Chain A, Crystal Structure Of Pim-1 Bound To Ly294002
pdb|1YI4|A Chain A, Structure Of Pim-1 Bound To Adenosine
Length = 273
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 104/208 (50%), Gaps = 13/208 (6%)
Query: 295 KFGSKVASGSYGDLYRGTYCSQD--VAIKVLKPERINSDMQ----KEFAQEVFIMRKVR- 347
+ G + SG +G +Y G S + VAIK ++ +RI+ + EV +++KV
Sbjct: 7 QVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSS 66
Query: 348 -HKNVVQFIGACTKPPSLCIVTEFMSG-GSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNY 405
V++ + +P S ++ E ++D++ + +G + V + + +
Sbjct: 67 GFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITE-RGALQEELARSFFWQVLEAVRH 125
Query: 406 LHQNNIIHRDLKAANLLMDENE-VVKVADFGVARVKAQSGVMTAETGTYRWMAPEVIE-H 463
H ++HRD+K N+L+D N +K+ DFG + + V T GT + PE I H
Sbjct: 126 CHNXGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT-VYTDFDGTRVYSPPEWIRYH 184
Query: 464 KPYDHKADVFSFGIVLWELLTGKLPYEY 491
+ + A V+S GI+L++++ G +P+E+
Sbjct: 185 RYHGRSAAVWSLGILLYDMVCGDIPFEH 212
>pdb|2XIY|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-2 From
Crystallographic Fragment Screen
pdb|2XIZ|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-3 From
Crystallographic Fragment Screen
pdb|2XJ1|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inibitor
pdb|2XJ2|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inhibitor
Length = 301
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 104/208 (50%), Gaps = 13/208 (6%)
Query: 295 KFGSKVASGSYGDLYRGTYCSQD--VAIKVLKPERINSDMQ----KEFAQEVFIMRKVR- 347
+ G + SG +G +Y G S + VAIK ++ +RI+ + EV +++KV
Sbjct: 27 QVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSS 86
Query: 348 -HKNVVQFIGACTKPPSLCIVTEFMSG-GSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNY 405
V++ + +P S ++ E ++D++ + +G + V + + +
Sbjct: 87 GFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITE-RGALQEELARSFFWQVLEAVRH 145
Query: 406 LHQNNIIHRDLKAANLLMDENEV-VKVADFGVARVKAQSGVMTAETGTYRWMAPEVIE-H 463
H ++HRD+K N+L+D N +K+ DFG + + V T GT + PE I H
Sbjct: 146 CHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT-VYTDFDGTRVYSPPEWIRYH 204
Query: 464 KPYDHKADVFSFGIVLWELLTGKLPYEY 491
+ + A V+S GI+L++++ G +P+E+
Sbjct: 205 RYHGRSAAVWSLGILLYDMVCGDIPFEH 232
>pdb|3A99|A Chain A, Structure Of Pim-1 Kinase Crystallized In The Presence Of
P27kip1 Carboxy-Terminal Peptide
Length = 320
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 104/208 (50%), Gaps = 13/208 (6%)
Query: 295 KFGSKVASGSYGDLYRGTYCSQD--VAIKVLKPERINSDMQ----KEFAQEVFIMRKVR- 347
+ G + SG +G +Y G S + VAIK ++ +RI+ + EV +++KV
Sbjct: 46 QVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSS 105
Query: 348 -HKNVVQFIGACTKPPSLCIVTEFMSG-GSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNY 405
V++ + +P S ++ E ++D++ + +G + V + + +
Sbjct: 106 GFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITE-RGALQEELARSFFWQVLEAVRH 164
Query: 406 LHQNNIIHRDLKAANLLMDENEV-VKVADFGVARVKAQSGVMTAETGTYRWMAPEVIE-H 463
H ++HRD+K N+L+D N +K+ DFG + + V T GT + PE I H
Sbjct: 165 CHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT-VYTDFDGTRVYSPPEWIRYH 223
Query: 464 KPYDHKADVFSFGIVLWELLTGKLPYEY 491
+ + A V+S GI+L++++ G +P+E+
Sbjct: 224 RYHGRSAAVWSLGILLYDMVCGDIPFEH 251
>pdb|2XJ0|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-4 From
Crystallographic Fragment Screen
Length = 301
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 104/208 (50%), Gaps = 13/208 (6%)
Query: 295 KFGSKVASGSYGDLYRGTYCSQD--VAIKVLKPERINSDMQ----KEFAQEVFIMRKVR- 347
+ G + SG +G +Y G S + VAIK ++ +RI+ + EV +++KV
Sbjct: 27 QVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSS 86
Query: 348 -HKNVVQFIGACTKPPSLCIVTEFMSG-GSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNY 405
V++ + +P S ++ E ++D++ + +G + V + + +
Sbjct: 87 GFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITE-RGALQEELARSFFWQVLEAVRH 145
Query: 406 LHQNNIIHRDLKAANLLMDENEV-VKVADFGVARVKAQSGVMTAETGTYRWMAPEVIE-H 463
H ++HRD+K N+L+D N +K+ DFG + + V T GT + PE I H
Sbjct: 146 CHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT-VYTDFDGTRVYSPPEWIRYH 204
Query: 464 KPYDHKADVFSFGIVLWELLTGKLPYEY 491
+ + A V+S GI+L++++ G +P+E+
Sbjct: 205 RYHGRSAAVWSLGILLYDMVCGDIPFEH 232
>pdb|3R00|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R01|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R02|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R04|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3VBQ|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBT|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBV|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBW|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBX|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBY|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VC4|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
Length = 299
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 104/208 (50%), Gaps = 13/208 (6%)
Query: 295 KFGSKVASGSYGDLYRGTYCSQD--VAIKVLKPERINSDMQ----KEFAQEVFIMRKVR- 347
+ G + SG +G +Y G S + VAIK ++ +RI+ + EV +++KV
Sbjct: 12 QVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSS 71
Query: 348 -HKNVVQFIGACTKPPSLCIVTEFMSG-GSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNY 405
V++ + +P S ++ E ++D++ + +G + V + + +
Sbjct: 72 GFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITE-RGALQEELARSFFWQVLEAVRH 130
Query: 406 LHQNNIIHRDLKAANLLMDENE-VVKVADFGVARVKAQSGVMTAETGTYRWMAPEVIE-H 463
H ++HRD+K N+L+D N +K+ DFG + + V T GT + PE I H
Sbjct: 131 CHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT-VYTDFDGTRVYSPPEWIRYH 189
Query: 464 KPYDHKADVFSFGIVLWELLTGKLPYEY 491
+ + A V+S GI+L++++ G +P+E+
Sbjct: 190 RYHGRSAAVWSLGILLYDMVCGDIPFEH 217
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 83/165 (50%), Gaps = 11/165 (6%)
Query: 335 EFAQEVFIMRKVRHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDY------LHKLKGVFK 388
+F E+ I+ ++++ + G T + I+ E+M S+ + L K F
Sbjct: 89 DFKNELQIITDIKNEYCLTCEGIITNYDEVYIIYEYMENDSILKFDEYFFVLDKNYTCFI 148
Query: 389 LPSLLKVAI-DVSKGMNYLH-QNNIIHRDLKAANLLMDENEVVKVADFGVARVKAQSGVM 446
++K I V +Y+H + NI HRD+K +N+LMD+N VK++DFG + +
Sbjct: 149 PIQVIKCIIKSVLNSFSYIHNEKNICHRDVKPSNILMDKNGRVKLSDFGESEYMVDKKI- 207
Query: 447 TAETGTYRWMAPEVIEHK-PYD-HKADVFSFGIVLWELLTGKLPY 489
GTY +M PE ++ Y+ K D++S GI L+ + +P+
Sbjct: 208 KGSRGTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMFYNVVPF 252
>pdb|3JXW|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JY0|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JYA|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
Length = 294
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 104/208 (50%), Gaps = 13/208 (6%)
Query: 295 KFGSKVASGSYGDLYRGTYCSQD--VAIKVLKPERINSDMQ----KEFAQEVFIMRKVR- 347
+ G + SG +G +Y G S + VAIK ++ +RI+ + EV +++KV
Sbjct: 12 QVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSS 71
Query: 348 -HKNVVQFIGACTKPPSLCIVTEFMSG-GSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNY 405
V++ + +P S ++ E ++D++ + +G + V + + +
Sbjct: 72 GFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITE-RGALQEELARSFFWQVLEAVRH 130
Query: 406 LHQNNIIHRDLKAANLLMDENE-VVKVADFGVARVKAQSGVMTAETGTYRWMAPEVIE-H 463
H ++HRD+K N+L+D N +K+ DFG + + V T GT + PE I H
Sbjct: 131 CHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT-VYTDFDGTRVYSPPEWIRYH 189
Query: 464 KPYDHKADVFSFGIVLWELLTGKLPYEY 491
+ + A V+S GI+L++++ G +P+E+
Sbjct: 190 RYHGRSAAVWSLGILLYDMVCGDIPFEH 217
>pdb|1YWV|A Chain A, Crystal Structures Of Proto-Oncogene Kinase Pim1: A Target
Of Aberrant Somatic Hypermutations In Diffuse Large Cell
Lymphoma
pdb|1YXT|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amppnp
pdb|1YXU|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|B Chain B, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|C Chain C, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|D Chain D, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXV|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
3,4-Dihydroxy-1- Methylquinolin-2(1h)-One
pdb|1YXX|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
(3e)-3-[(4- Hydroxyphenyl)imino]-1h-Indol-2(3h)-One
pdb|2O3P|A Chain A, Crystal Structure Of Pim1 With Quercetin
pdb|2O63|A Chain A, Crystal Structure Of Pim1 With Myricetin
pdb|2O64|A Chain A, Crystal Structure Of Pim1 With Quercetagetin
pdb|2O65|A Chain A, Crystal Structure Of Pim1 With Pentahydroxyflavone
Length = 293
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 104/208 (50%), Gaps = 13/208 (6%)
Query: 295 KFGSKVASGSYGDLYRGTYCSQD--VAIKVLKPERINSDMQ----KEFAQEVFIMRKVR- 347
+ G + SG +G +Y G S + VAIK ++ +RI+ + EV +++KV
Sbjct: 11 QVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSS 70
Query: 348 -HKNVVQFIGACTKPPSLCIVTEFMSG-GSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNY 405
V++ + +P S ++ E ++D++ + +G + V + + +
Sbjct: 71 GFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITE-RGALQEELARSFFWQVLEAVRH 129
Query: 406 LHQNNIIHRDLKAANLLMDENE-VVKVADFGVARVKAQSGVMTAETGTYRWMAPEVIE-H 463
H ++HRD+K N+L+D N +K+ DFG + + V T GT + PE I H
Sbjct: 130 CHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT-VYTDFDGTRVYSPPEWIRYH 188
Query: 464 KPYDHKADVFSFGIVLWELLTGKLPYEY 491
+ + A V+S GI+L++++ G +P+E+
Sbjct: 189 RYHGRSAAVWSLGILLYDMVCGDIPFEH 216
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 99/200 (49%), Gaps = 39/200 (19%)
Query: 314 CSQDVAIKVLKPERINSDMQ--KEFAQEVFIMRKVRHKNVVQF--------------IGA 357
C + VAIK + + +D Q K +E+ I+R++ H N+V+ +G+
Sbjct: 35 CDKRVAIKKI----VLTDPQSVKHALREIKIIRRLDHDNIVKVFEILGPSGSQLTDDVGS 90
Query: 358 CTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLK-----VAIDVSKGMNYLHQNNII 412
T+ S+ IV E+M L V + LL+ + +G+ Y+H N++
Sbjct: 91 LTELNSVYIVQEYMET--------DLANVLEQGPLLEEHARLFMYQLLRGLKYIHSANVL 142
Query: 413 HRDLKAANLLMD-ENEVVKVADFGVARVK----AQSGVMTAETGTYRWMAPE-VIEHKPY 466
HRDLK ANL ++ E+ V+K+ DFG+AR+ + G ++ T + +P ++ Y
Sbjct: 143 HRDLKPANLFINTEDLVLKIGDFGLARIMDPHYSHKGHLSEGLVTKWYRSPRLLLSPNNY 202
Query: 467 DHKADVFSFGIVLWELLTGK 486
D+++ G + E+LTGK
Sbjct: 203 TKAIDMWAAGCIFAEMLTGK 222
>pdb|4DTK|A Chain A, Novel And Selective Pan-Pim Kinase Inhibitor
Length = 276
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 104/208 (50%), Gaps = 13/208 (6%)
Query: 295 KFGSKVASGSYGDLYRGTYCSQD--VAIKVLKPERINSDMQ----KEFAQEVFIMRKVR- 347
+ G + SG +G +Y G S + VAIK ++ +RI+ + EV +++KV
Sbjct: 10 QVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSS 69
Query: 348 -HKNVVQFIGACTKPPSLCIVTEFMSG-GSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNY 405
V++ + +P S ++ E ++D++ + +G + V + + +
Sbjct: 70 GFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITE-RGALQEELARSFFWQVLEAVRH 128
Query: 406 LHQNNIIHRDLKAANLLMDENE-VVKVADFGVARVKAQSGVMTAETGTYRWMAPEVIE-H 463
H ++HRD+K N+L+D N +K+ DFG + + V T GT + PE I H
Sbjct: 129 CHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT-VYTDFDGTRVYSPPEWIRYH 187
Query: 464 KPYDHKADVFSFGIVLWELLTGKLPYEY 491
+ + A V+S GI+L++++ G +P+E+
Sbjct: 188 RYHGRSAAVWSLGILLYDMVCGDIPFEH 215
>pdb|3UIX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Small
Molecule Inhibitor
pdb|3UMX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indol-3-Yl)methylene]-7-(Azepan-1-Ylmethyl)-6-
Hydroxybenzofuran- 3(2h)-One
pdb|4ENX|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
Inhibitor (2e,5z)-2-
(2-Chlorophenylimino)-5-(4-Hydroxy-3-
Nitrobenzylidene)thiazolidin-4- One
pdb|4ENY|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
(2e,5z)-2-(2-
Chlorophenylimino)-5-(4-Hydroxy-3-
Methoxybenzylidene)thiazolidin-4- One
pdb|3UMW|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indazol-3-Yl)methylene]-6-Methoxy-7-(Piperazin-1-
Ylmethyl)benzofuran- 3(2h)-One
Length = 298
Score = 68.6 bits (166), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 104/208 (50%), Gaps = 13/208 (6%)
Query: 295 KFGSKVASGSYGDLYRGTYCSQD--VAIKVLKPERINSDMQ----KEFAQEVFIMRKVR- 347
+ G + SG +G +Y G S + VAIK ++ +RI+ + EV +++KV
Sbjct: 12 QVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSS 71
Query: 348 -HKNVVQFIGACTKPPSLCIVTEFMSG-GSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNY 405
V++ + +P S ++ E ++D++ + +G + V + + +
Sbjct: 72 GFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITE-RGALQEELARSFFWQVLEAVRH 130
Query: 406 LHQNNIIHRDLKAANLLMDENEV-VKVADFGVARVKAQSGVMTAETGTYRWMAPEVIE-H 463
H ++HRD+K N+L+D N +K+ DFG + + V T GT + PE I H
Sbjct: 131 CHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT-VYTDFDGTRVYSPPEWIRYH 189
Query: 464 KPYDHKADVFSFGIVLWELLTGKLPYEY 491
+ + A V+S GI+L++++ G +P+E+
Sbjct: 190 RYHGRSAAVWSLGILLYDMVCGDIPFEH 217
>pdb|4AS0|A Chain A, Cyclometalated Phthalimides As Protein Kinase Inhibitors
Length = 273
Score = 68.6 bits (166), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 104/208 (50%), Gaps = 13/208 (6%)
Query: 295 KFGSKVASGSYGDLYRGTYCSQD--VAIKVLKPERINSDMQ----KEFAQEVFIMRKVR- 347
+ G + SG +G +Y G S + VAIK ++ +RI+ + EV +++KV
Sbjct: 7 QVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSS 66
Query: 348 -HKNVVQFIGACTKPPSLCIVTEFMSG-GSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNY 405
V++ + +P S ++ E ++D++ + +G + V + + +
Sbjct: 67 GFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITE-RGALQEELARSFFWQVLEAVRH 125
Query: 406 LHQNNIIHRDLKAANLLMDENEV-VKVADFGVARVKAQSGVMTAETGTYRWMAPEVIE-H 463
H ++HRD+K N+L+D N +K+ DFG + + V T GT + PE I H
Sbjct: 126 CHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT-VYTDFDGTRVYSPPEWIRYH 184
Query: 464 KPYDHKADVFSFGIVLWELLTGKLPYEY 491
+ + A V+S GI+L++++ G +P+E+
Sbjct: 185 RYHGRSAAVWSLGILLYDMVCGDIPFEH 212
>pdb|4A7C|A Chain A, Crystal Structure Of Pim1 Kinase With Etp46546
Length = 308
Score = 68.6 bits (166), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 104/208 (50%), Gaps = 13/208 (6%)
Query: 295 KFGSKVASGSYGDLYRGTYCSQD--VAIKVLKPERINSDMQ----KEFAQEVFIMRKVR- 347
+ G + SG +G +Y G S + VAIK ++ +RI+ + EV +++KV
Sbjct: 34 QVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSS 93
Query: 348 -HKNVVQFIGACTKPPSLCIVTEFMSG-GSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNY 405
V++ + +P S ++ E ++D++ + +G + V + + +
Sbjct: 94 GFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITE-RGALQEELARSFFWQVLEAVRH 152
Query: 406 LHQNNIIHRDLKAANLLMDENEV-VKVADFGVARVKAQSGVMTAETGTYRWMAPEVIE-H 463
H ++HRD+K N+L+D N +K+ DFG + + V T GT + PE I H
Sbjct: 153 CHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT-VYTDFDGTRVYSPPEWIRYH 211
Query: 464 KPYDHKADVFSFGIVLWELLTGKLPYEY 491
+ + A V+S GI+L++++ G +P+E+
Sbjct: 212 RYHGRSAAVWSLGILLYDMVCGDIPFEH 239
>pdb|3C4E|A Chain A, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|B Chain B, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|C Chain C, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|D Chain D, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
Length = 273
Score = 68.6 bits (166), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 104/208 (50%), Gaps = 13/208 (6%)
Query: 295 KFGSKVASGSYGDLYRGTYCSQD--VAIKVLKPERINSDMQ----KEFAQEVFIMRKVR- 347
+ G + SG +G +Y G S + VAIK ++ +RI+ + EV +++KV
Sbjct: 7 QVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSS 66
Query: 348 -HKNVVQFIGACTKPPSLCIVTEFMSG-GSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNY 405
V++ + +P S ++ E ++D++ + +G + V + + +
Sbjct: 67 GFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITE-RGALQEELARSFFWQVLEAVRH 125
Query: 406 LHQNNIIHRDLKAANLLMDENE-VVKVADFGVARVKAQSGVMTAETGTYRWMAPEVIE-H 463
H ++HRD+K N+L+D N +K+ DFG + + V T GT + PE I H
Sbjct: 126 CHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT-VYTDFDGTRVYSPPEWIRYH 184
Query: 464 KPYDHKADVFSFGIVLWELLTGKLPYEY 491
+ + A V+S GI+L++++ G +P+E+
Sbjct: 185 RYHGRSAAVWSLGILLYDMVCGDIPFEH 212
>pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
pdb|3LL6|B Chain B, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
Length = 337
Score = 68.6 bits (166), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 51/186 (27%), Positives = 86/186 (46%), Gaps = 30/186 (16%)
Query: 334 KEFAQEVFIMRKVR-HKNVVQFIGAC--------TKPPSLCIVTEFMSGGSVYDYLHKL- 383
+ QEV M+K+ H N+VQF A T ++TE + G + ++L K+
Sbjct: 70 RAIIQEVCFMKKLSGHPNIVQFCSAASIGKEESDTGQAEFLLLTE-LCKGQLVEFLKKME 128
Query: 384 -KGVFKLPSLLKVAIDVSKGMNYLHQNN--IIHRDLKAANLLMDENEVVKVADFGVARV- 439
+G ++LK+ + + ++H+ IIHRDLK NLL+ +K+ DFG A
Sbjct: 129 SRGPLSCDTVLKIFYQTCRAVQHMHRQKPPIIHRDLKVENLLLSNQGTIKLCDFGSATTI 188
Query: 440 --------KAQSGVMTAE----TGTYRWMAPEVIE---HKPYDHKADVFSFGIVLWELLT 484
AQ + E T + PE+I+ + P K D+++ G +L+ L
Sbjct: 189 SHYPDYSWSAQRRALVEEEITRNTTPMYRTPEIIDLYSNFPIGEKQDIWALGCILYLLCF 248
Query: 485 GKLPYE 490
+ P+E
Sbjct: 249 RQHPFE 254
>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
pdb|2BUJ|B Chain B, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
Length = 317
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/225 (25%), Positives = 104/225 (46%), Gaps = 26/225 (11%)
Query: 289 IDPKHLKFGSKVASG--SYGDLYRGTYCSQDVAIK-VLKPERINSDMQKEFAQEVFIMRK 345
ID KH F K+ G SY DL G + A+K +L E+ + ++E +E + R
Sbjct: 26 IDNKHYLFIQKLGEGGFSYVDLVEGLHDGHFYALKRILCHEQQD---REEAQREADMHRL 82
Query: 346 VRHKNVVQFIGACTKPPSL----CIVTEFMSGGSVYDYLHKLK--GVFKLP-SLLKVAID 398
H N+++ + C + ++ F G++++ + +LK G F +L + +
Sbjct: 83 FNHPNILRLVAYCLRERGAKHEAWLLLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLG 142
Query: 399 VSKGMNYLHQNNIIHRDLKAANLLMDENEVVKVADFG-----VARVKAQSGVMT-----A 448
+ +G+ +H HRDLK N+L+ + + D G V+ +T A
Sbjct: 143 ICRGLEAIHAKGYAHRDLKPTNILLGDEGQPVLMDLGSMNQACIHVEGSRQALTLQDWAA 202
Query: 449 ETGTYRWMAPEVI---EHKPYDHKADVFSFGIVLWELLTGKLPYE 490
+ T + APE+ H D + DV+S G VL+ ++ G+ PY+
Sbjct: 203 QRCTISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYD 247
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 97/198 (48%), Gaps = 17/198 (8%)
Query: 298 SKVASGSYGDLYRG--TYCSQDVAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQFI 355
+K+ G+YG++Y+ T ++ VAIK ++ E + +EV ++++++H+N+++
Sbjct: 40 TKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKELQHRNIIELK 99
Query: 356 GACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRD 415
L ++ E+ + + Y+ K V + + + G+N+ H +HRD
Sbjct: 100 SVIHHNHRLHLIFEY-AENDLKKYMDKNPDV-SMRVIKSFLYQLINGVNFCHSRRCLHRD 157
Query: 416 LKAANLLM-----DENEVVKVADFGVARVKAQSGV----MTAETGTYRWMAPEV-IEHKP 465
LK NLL+ E V+K+ DFG+AR G+ T E T + PE+ + +
Sbjct: 158 LKPQNLLLSVSDASETPVLKIGDFGLARA---FGIPIRQFTHEIITLWYRPPEILLGSRH 214
Query: 466 YDHKADVFSFGIVLWELL 483
Y D++S + E+L
Sbjct: 215 YSTSVDIWSIACIWAEML 232
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 102/202 (50%), Gaps = 13/202 (6%)
Query: 300 VASGSYGDLY-----RGTYCSQDVAIKVLKPERI--NSDMQKEFAQEVFIMRKVRHK-NV 351
+ +G+YG ++ G + A+KVLK I + + E ++ +R +
Sbjct: 62 LGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFL 121
Query: 352 VQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNI 411
V A L ++ ++++GG ++ +L + + + + V ++ + +LH+ I
Sbjct: 122 VTLHYAFQTETKLHLILDYINGGELFTHLSQRERFTEHEVQIYVG-EIVLALEHLHKLGI 180
Query: 412 IHRDLKAANLLMDENEVVKVADFGVAR--VKAQSGVMTAETGTYRWMAPEVIE--HKPYD 467
I+RD+K N+L+D N V + DFG+++ V ++ GT +MAP+++ +D
Sbjct: 181 IYRDIKLENILLDSNGHVVLTDFGLSKEFVADETERAYDFCGTIEYMAPDIVRGGDSGHD 240
Query: 468 HKADVFSFGIVLWELLTGKLPY 489
D +S G++++ELLTG P+
Sbjct: 241 KAVDWWSLGVLMYELLTGASPF 262
>pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
pdb|3N9X|B Chain B, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
Length = 432
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 95/216 (43%), Gaps = 35/216 (16%)
Query: 300 VASGSYGDLYRGTYCSQDVAIKVLKPERINSDM--QKEFAQEVFIMRKVRHKNVVQFIGA 357
+ GSYG +Y + + + + K R+ D+ K +E+ I+ +++ +++
Sbjct: 34 IGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILREITILNRLKSDYIIRLYDL 93
Query: 358 CTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLK------VAIDVSKGMNYLHQNNI 411
P L E + D LK +FK P L + ++ G N++H++ I
Sbjct: 94 II-PDDLLKFDELYIVLEIAD--SDLKKLFKTPIFLTEEHIKTILYNLLLGENFIHESGI 150
Query: 412 IHRDLKAANLLMDENEVVKVADFGVARV-----------------------KAQSGVMTA 448
IHRDLK AN L++++ VKV DFG+AR K +T+
Sbjct: 151 IHRDLKPANCLLNQDCSVKVCDFGLARTINSEKDTNIVNDLEENEEPGPHNKNLKKQLTS 210
Query: 449 ETGTYRWMAPEVI-EHKPYDHKADVFSFGIVLWELL 483
T + APE+I + Y D++S G + ELL
Sbjct: 211 HVVTRWYRAPELILLQENYTKSIDIWSTGCIFAELL 246
>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 2-(aminothiazoly)phenol (cmp2)
Length = 336
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 93/205 (45%), Gaps = 27/205 (13%)
Query: 299 KVASGSYGDLYR------GTYCS-QDVAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNV 351
+V GS+G+++R G C+ + V ++V + E E+ + +
Sbjct: 65 RVGRGSFGEVHRMKDKQTGFQCAVKKVRLEVFRVE------------ELVACAGLSSPRI 112
Query: 352 VQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNI 411
V GA + P + I E + GGS+ + ++ G L +G+ YLH I
Sbjct: 113 VPLYGAVREGPWVNIFMELLEGGSLGQLIKQM-GCLPEDRALYYLGQALEGLEYLHTRRI 171
Query: 412 IHRDLKAANLLMD-ENEVVKVADFGVARVKAQSGV----MTAE--TGTYRWMAPEVIEHK 464
+H D+KA N+L+ + + DFG A G+ +T + GT MAPEV+ K
Sbjct: 172 LHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMGK 231
Query: 465 PYDHKADVFSFGIVLWELLTGKLPY 489
P D K D++S ++ +L G P+
Sbjct: 232 PCDAKVDIWSSCCMMLHMLNGCHPW 256
>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3C|B Chain B, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3E|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
pdb|4G3E|B Chain B, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
Length = 352
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 93/205 (45%), Gaps = 27/205 (13%)
Query: 299 KVASGSYGDLYR------GTYCS-QDVAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNV 351
+V GS+G+++R G C+ + V ++V + E E+ + +
Sbjct: 81 RVGRGSFGEVHRMKDKQTGFQCAVKKVRLEVFRVE------------ELVACAGLSSPRI 128
Query: 352 VQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNI 411
V GA + P + I E + GGS+ + ++ G L +G+ YLH I
Sbjct: 129 VPLYGAVREGPWVNIFMELLEGGSLGQLIKQM-GCLPEDRALYYLGQALEGLEYLHTRRI 187
Query: 412 IHRDLKAANLLMD-ENEVVKVADFGVARVKAQSGV----MTAE--TGTYRWMAPEVIEHK 464
+H D+KA N+L+ + + DFG A G+ +T + GT MAPEV+ K
Sbjct: 188 LHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMGK 247
Query: 465 PYDHKADVFSFGIVLWELLTGKLPY 489
P D K D++S ++ +L G P+
Sbjct: 248 PCDAKVDIWSSCCMMLHMLNGCHPW 272
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 64/202 (31%), Positives = 103/202 (50%), Gaps = 24/202 (11%)
Query: 300 VASGSYGDLYRGTYCSQD--VAIK-VLKPERINSDMQKEFAQEVFIMRKVRHKNVVQ--- 353
+ +GS+G +Y+ C VAIK VL+ +R + +E+ IMRK+ H N+V+
Sbjct: 62 IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN-------RELQIMRKLDHCNIVRLRY 114
Query: 354 -FIGACTKPPS--LCIVTEFMSGGSVYDYLHKLKGVFKLPSL-LKVAI-DVSKGMNYLHQ 408
F + K L +V +++ H + LP + +K+ + + + + Y+H
Sbjct: 115 FFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHS 174
Query: 409 NNIIHRDLKAANLLMD-ENEVVKVADFGVAR--VKAQSGVMTAETGTYRWMAPEVI-EHK 464
I HRD+K NLL+D + V+K+ DFG A+ V+ + V + YR APE+I
Sbjct: 175 FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYR--APELIFGAT 232
Query: 465 PYDHKADVFSFGIVLWELLTGK 486
Y DV+S G VL ELL G+
Sbjct: 233 DYTSSIDVWSAGCVLAELLLGQ 254
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 97/216 (44%), Gaps = 37/216 (17%)
Query: 294 LKFGSKVASGSYGDLYRGTY--CSQDVAIKVLKPERINSDMQKEFA----QEVFIMRKVR 347
+ S + G+YG + T+ + VAIK ++P + FA +E+ I++ +
Sbjct: 13 FQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFD-----KPLFALRTLREIKILKHFK 67
Query: 348 HKNVVQFIGACTKPPSL------CIVTEFMSGGSVYDYLHKLKGVFKLPS--LLKVAIDV 399
H+N++ I +P S I+ E M LH++ L +
Sbjct: 68 HENIIT-IFNIQRPDSFENFNEVYIIQELMQTD-----LHRVISTQMLSDDHIQYFIYQT 121
Query: 400 SKGMNYLHQNNIIHRDLKAANLLMDENEVVKVADFGVARV-----------KAQSGVMTA 448
+ + LH +N+IHRDLK +NLL++ N +KV DFG+AR+ Q MT
Sbjct: 122 LRAVKVLHGSNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMTE 181
Query: 449 ETGTYRWMAPEV-IEHKPYDHKADVFSFGIVLWELL 483
T + APEV + Y DV+S G +L EL
Sbjct: 182 XVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELF 217
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 64/202 (31%), Positives = 103/202 (50%), Gaps = 24/202 (11%)
Query: 300 VASGSYGDLYRGTYCSQD--VAIK-VLKPERINSDMQKEFAQEVFIMRKVRHKNVVQ--- 353
+ +GS+G +Y+ C VAIK VL+ +R + +E+ IMRK+ H N+V+
Sbjct: 40 IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN-------RELQIMRKLDHCNIVRLRY 92
Query: 354 -FIGACTKPPS--LCIVTEFMSGGSVYDYLHKLKGVFKLPSL-LKVAI-DVSKGMNYLHQ 408
F + K L +V +++ H + LP + +K+ + + + + Y+H
Sbjct: 93 FFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHS 152
Query: 409 NNIIHRDLKAANLLMD-ENEVVKVADFGVAR--VKAQSGVMTAETGTYRWMAPEVI-EHK 464
I HRD+K NLL+D + V+K+ DFG A+ V+ + V + YR APE+I
Sbjct: 153 FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYR--APELIFGAT 210
Query: 465 PYDHKADVFSFGIVLWELLTGK 486
Y DV+S G VL ELL G+
Sbjct: 211 DYTSSIDVWSAGCVLAELLLGQ 232
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 64/202 (31%), Positives = 103/202 (50%), Gaps = 24/202 (11%)
Query: 300 VASGSYGDLYRGTYCSQD--VAIK-VLKPERINSDMQKEFAQEVFIMRKVRHKNVVQ--- 353
+ +GS+G +Y+ C VAIK VL+ +R + +E+ IMRK+ H N+V+
Sbjct: 47 IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN-------RELQIMRKLDHCNIVRLRY 99
Query: 354 -FIGACTKPPS--LCIVTEFMSGGSVYDYLHKLKGVFKLPSL-LKVAI-DVSKGMNYLHQ 408
F + K L +V +++ H + LP + +K+ + + + + Y+H
Sbjct: 100 FFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHS 159
Query: 409 NNIIHRDLKAANLLMD-ENEVVKVADFGVAR--VKAQSGVMTAETGTYRWMAPEVI-EHK 464
I HRD+K NLL+D + V+K+ DFG A+ V+ + V + YR APE+I
Sbjct: 160 FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYR--APELIFGAT 217
Query: 465 PYDHKADVFSFGIVLWELLTGK 486
Y DV+S G VL ELL G+
Sbjct: 218 DYTSSIDVWSAGCVLAELLLGQ 239
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 64/202 (31%), Positives = 103/202 (50%), Gaps = 24/202 (11%)
Query: 300 VASGSYGDLYRGTYCSQD--VAIK-VLKPERINSDMQKEFAQEVFIMRKVRHKNVVQ--- 353
+ +GS+G +Y+ C VAIK VL+ +R + +E+ IMRK+ H N+V+
Sbjct: 40 IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN-------RELQIMRKLDHCNIVRLRY 92
Query: 354 -FIGACTKPPS--LCIVTEFMSGGSVYDYLHKLKGVFKLPSL-LKVAI-DVSKGMNYLHQ 408
F + K L +V +++ H + LP + +K+ + + + + Y+H
Sbjct: 93 FFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHS 152
Query: 409 NNIIHRDLKAANLLMD-ENEVVKVADFGVAR--VKAQSGVMTAETGTYRWMAPEVI-EHK 464
I HRD+K NLL+D + V+K+ DFG A+ V+ + V + YR APE+I
Sbjct: 153 FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYR--APELIFGAT 210
Query: 465 PYDHKADVFSFGIVLWELLTGK 486
Y DV+S G VL ELL G+
Sbjct: 211 DYTSSIDVWSAGCVLAELLLGQ 232
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 64/202 (31%), Positives = 103/202 (50%), Gaps = 24/202 (11%)
Query: 300 VASGSYGDLYRGTYCSQD--VAIK-VLKPERINSDMQKEFAQEVFIMRKVRHKNVVQ--- 353
+ +GS+G +Y+ C VAIK VL+ +R + +E+ IMRK+ H N+V+
Sbjct: 36 IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN-------RELQIMRKLDHCNIVRLRY 88
Query: 354 -FIGACTKPPS--LCIVTEFMSGGSVYDYLHKLKGVFKLPSL-LKVAI-DVSKGMNYLHQ 408
F + K L +V +++ H + LP + +K+ + + + + Y+H
Sbjct: 89 FFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHS 148
Query: 409 NNIIHRDLKAANLLMD-ENEVVKVADFGVAR--VKAQSGVMTAETGTYRWMAPEVI-EHK 464
I HRD+K NLL+D + V+K+ DFG A+ V+ + V + YR APE+I
Sbjct: 149 FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYR--APELIFGAT 206
Query: 465 PYDHKADVFSFGIVLWELLTGK 486
Y DV+S G VL ELL G+
Sbjct: 207 DYTSSIDVWSAGCVLAELLLGQ 228
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 64/202 (31%), Positives = 103/202 (50%), Gaps = 24/202 (11%)
Query: 300 VASGSYGDLYRGTYCSQD--VAIK-VLKPERINSDMQKEFAQEVFIMRKVRHKNVVQ--- 353
+ +GS+G +Y+ C VAIK VL+ +R + +E+ IMRK+ H N+V+
Sbjct: 28 IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN-------RELQIMRKLDHCNIVRLRY 80
Query: 354 -FIGACTKPPS--LCIVTEFMSGGSVYDYLHKLKGVFKLPSL-LKVAI-DVSKGMNYLHQ 408
F + K L +V +++ H + LP + +K+ + + + + Y+H
Sbjct: 81 FFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHS 140
Query: 409 NNIIHRDLKAANLLMD-ENEVVKVADFGVAR--VKAQSGVMTAETGTYRWMAPEVI-EHK 464
I HRD+K NLL+D + V+K+ DFG A+ V+ + V + YR APE+I
Sbjct: 141 FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYR--APELIFGAT 198
Query: 465 PYDHKADVFSFGIVLWELLTGK 486
Y DV+S G VL ELL G+
Sbjct: 199 DYTSSIDVWSAGCVLAELLLGQ 220
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 64/202 (31%), Positives = 103/202 (50%), Gaps = 24/202 (11%)
Query: 300 VASGSYGDLYRGTYCSQD--VAIK-VLKPERINSDMQKEFAQEVFIMRKVRHKNVVQ--- 353
+ +GS+G +Y+ C VAIK VL+ +R + +E+ IMRK+ H N+V+
Sbjct: 28 IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN-------RELQIMRKLDHCNIVRLRY 80
Query: 354 -FIGACTKPPS--LCIVTEFMSGGSVYDYLHKLKGVFKLPSL-LKVAI-DVSKGMNYLHQ 408
F + K L +V +++ H + LP + +K+ + + + + Y+H
Sbjct: 81 FFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHS 140
Query: 409 NNIIHRDLKAANLLMD-ENEVVKVADFGVAR--VKAQSGVMTAETGTYRWMAPEVI-EHK 464
I HRD+K NLL+D + V+K+ DFG A+ V+ + V + YR APE+I
Sbjct: 141 FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYR--APELIFGAT 198
Query: 465 PYDHKADVFSFGIVLWELLTGK 486
Y DV+S G VL ELL G+
Sbjct: 199 DYTSSIDVWSAGCVLAELLLGQ 220
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 64/202 (31%), Positives = 103/202 (50%), Gaps = 24/202 (11%)
Query: 300 VASGSYGDLYRGTYCSQD--VAIK-VLKPERINSDMQKEFAQEVFIMRKVRHKNVVQ--- 353
+ +GS+G +Y+ C VAIK VL+ +R + +E+ IMRK+ H N+V+
Sbjct: 29 IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN-------RELQIMRKLDHCNIVRLRY 81
Query: 354 -FIGACTKPPS--LCIVTEFMSGGSVYDYLHKLKGVFKLPSL-LKVAI-DVSKGMNYLHQ 408
F + K L +V +++ H + LP + +K+ + + + + Y+H
Sbjct: 82 FFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHS 141
Query: 409 NNIIHRDLKAANLLMD-ENEVVKVADFGVAR--VKAQSGVMTAETGTYRWMAPEVI-EHK 464
I HRD+K NLL+D + V+K+ DFG A+ V+ + V + YR APE+I
Sbjct: 142 FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYR--APELIFGAT 199
Query: 465 PYDHKADVFSFGIVLWELLTGK 486
Y DV+S G VL ELL G+
Sbjct: 200 DYTSSIDVWSAGCVLAELLLGQ 221
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 97/216 (44%), Gaps = 37/216 (17%)
Query: 294 LKFGSKVASGSYGDLYRGTY--CSQDVAIKVLKPERINSDMQKEFA----QEVFIMRKVR 347
+ S + G+YG + T+ + VAIK ++P + FA +E+ I++ +
Sbjct: 13 FQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFD-----KPLFALRTLREIKILKHFK 67
Query: 348 HKNVVQFIGACTKPPSL------CIVTEFMSGGSVYDYLHKLKGVFKLPS--LLKVAIDV 399
H+N++ I +P S I+ E M LH++ L +
Sbjct: 68 HENIIT-IFNIQRPDSFENFNEVYIIQELMQTD-----LHRVISTQMLSDDHIQYFIYQT 121
Query: 400 SKGMNYLHQNNIIHRDLKAANLLMDENEVVKVADFGVARV-----------KAQSGVMTA 448
+ + LH +N+IHRDLK +NLL++ N +KV DFG+AR+ Q MT
Sbjct: 122 LRAVKVLHGSNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMTE 181
Query: 449 ETGTYRWMAPEV-IEHKPYDHKADVFSFGIVLWELL 483
T + APEV + Y DV+S G +L EL
Sbjct: 182 YVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELF 217
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 64/202 (31%), Positives = 103/202 (50%), Gaps = 24/202 (11%)
Query: 300 VASGSYGDLYRGTYCSQD--VAIK-VLKPERINSDMQKEFAQEVFIMRKVRHKNVVQ--- 353
+ +GS+G +Y+ C VAIK VL+ +R + +E+ IMRK+ H N+V+
Sbjct: 56 IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN-------RELQIMRKLDHCNIVRLRY 108
Query: 354 -FIGACTKPPS--LCIVTEFMSGGSVYDYLHKLKGVFKLPSL-LKVAI-DVSKGMNYLHQ 408
F + K L +V +++ H + LP + +K+ + + + + Y+H
Sbjct: 109 FFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHS 168
Query: 409 NNIIHRDLKAANLLMD-ENEVVKVADFGVAR--VKAQSGVMTAETGTYRWMAPEVI-EHK 464
I HRD+K NLL+D + V+K+ DFG A+ V+ + V + YR APE+I
Sbjct: 169 FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYR--APELIFGAT 226
Query: 465 PYDHKADVFSFGIVLWELLTGK 486
Y DV+S G VL ELL G+
Sbjct: 227 DYTSSIDVWSAGCVLAELLLGQ 248
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 64/202 (31%), Positives = 103/202 (50%), Gaps = 24/202 (11%)
Query: 300 VASGSYGDLYRGTYCSQD--VAIK-VLKPERINSDMQKEFAQEVFIMRKVRHKNVVQ--- 353
+ +GS+G +Y+ C VAIK VL+ +R + +E+ IMRK+ H N+V+
Sbjct: 64 IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN-------RELQIMRKLDHCNIVRLRY 116
Query: 354 -FIGACTKPPS--LCIVTEFMSGGSVYDYLHKLKGVFKLPSL-LKVAI-DVSKGMNYLHQ 408
F + K L +V +++ H + LP + +K+ + + + + Y+H
Sbjct: 117 FFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHS 176
Query: 409 NNIIHRDLKAANLLMD-ENEVVKVADFGVAR--VKAQSGVMTAETGTYRWMAPEVI-EHK 464
I HRD+K NLL+D + V+K+ DFG A+ V+ + V + YR APE+I
Sbjct: 177 FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYR--APELIFGAT 234
Query: 465 PYDHKADVFSFGIVLWELLTGK 486
Y DV+S G VL ELL G+
Sbjct: 235 DYTSSIDVWSAGCVLAELLLGQ 256
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 64/202 (31%), Positives = 103/202 (50%), Gaps = 24/202 (11%)
Query: 300 VASGSYGDLYRGTYCSQD--VAIK-VLKPERINSDMQKEFAQEVFIMRKVRHKNVVQ--- 353
+ +GS+G +Y+ C VAIK VL+ +R + +E+ IMRK+ H N+V+
Sbjct: 62 IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN-------RELQIMRKLDHCNIVRLRY 114
Query: 354 -FIGACTKPPS--LCIVTEFMSGGSVYDYLHKLKGVFKLPSL-LKVAI-DVSKGMNYLHQ 408
F + K L +V +++ H + LP + +K+ + + + + Y+H
Sbjct: 115 FFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHS 174
Query: 409 NNIIHRDLKAANLLMD-ENEVVKVADFGVAR--VKAQSGVMTAETGTYRWMAPEVI-EHK 464
I HRD+K NLL+D + V+K+ DFG A+ V+ + V + YR APE+I
Sbjct: 175 FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYR--APELIFGAT 232
Query: 465 PYDHKADVFSFGIVLWELLTGK 486
Y DV+S G VL ELL G+
Sbjct: 233 DYTSSIDVWSAGCVLAELLLGQ 254
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 64/202 (31%), Positives = 103/202 (50%), Gaps = 24/202 (11%)
Query: 300 VASGSYGDLYRGTYCSQD--VAIK-VLKPERINSDMQKEFAQEVFIMRKVRHKNVVQ--- 353
+ +GS+G +Y+ C VAIK VL+ +R + +E+ IMRK+ H N+V+
Sbjct: 32 IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN-------RELQIMRKLDHCNIVRLRY 84
Query: 354 -FIGACTKPPS--LCIVTEFMSGGSVYDYLHKLKGVFKLPSL-LKVAI-DVSKGMNYLHQ 408
F + K L +V +++ H + LP + +K+ + + + + Y+H
Sbjct: 85 FFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHS 144
Query: 409 NNIIHRDLKAANLLMD-ENEVVKVADFGVAR--VKAQSGVMTAETGTYRWMAPEVI-EHK 464
I HRD+K NLL+D + V+K+ DFG A+ V+ + V + YR APE+I
Sbjct: 145 FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYR--APELIFGAT 202
Query: 465 PYDHKADVFSFGIVLWELLTGK 486
Y DV+S G VL ELL G+
Sbjct: 203 DYTSSIDVWSAGCVLAELLLGQ 224
>pdb|4HGL|A Chain A, Crystal Structure Of Ck1g3 With Compound 1
pdb|4HGS|A Chain A, Crystal Structure Of Ck1gs With Compound 13
Length = 330
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 59/227 (25%), Positives = 107/227 (47%), Gaps = 24/227 (10%)
Query: 283 GTDVWEIDPKHLKFGSKVASGSYGDLYRGT--YCSQDVAIKV--LKPERINSDMQKEFAQ 338
G+ V + P + + G K+ G++G+L G Y ++ VAIK+ +K ++ F +
Sbjct: 1 GSGVLMVGP-NFRVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPMKSRAPQLHLEYRFYK 59
Query: 339 EVFIMRKVRHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAID 398
++ + V + G C K ++ V E + G S+ D F L ++L +AI
Sbjct: 60 QLGSGDGIPQ---VYYFGPCGKYNAM--VLELL-GPSLEDLFDLCDRTFSLKTVLMIAIQ 113
Query: 399 VSKGMNYLHQNNIIHRDLKAANLLMDE-----NEVVKVADFGVARV----KAQSGVMTAE 449
+ M Y+H N+I+RD+K N L+ +V+ + DFG+A+ + + + E
Sbjct: 114 LISRMEYVHSKNLIYRDVKPENFLIGRPGNKTQQVIHIIDFGLAKEYIDPETKKHIPYRE 173
Query: 450 ----TGTYRWMAPEVIEHKPYDHKADVFSFGIVLWELLTGKLPYEYL 492
TGT R+M+ K + D+ + G + L G LP++ L
Sbjct: 174 HKSLTGTARYMSINTHLGKEQSRRDDLEALGHMFMYFLRGSLPWQGL 220
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 64/202 (31%), Positives = 103/202 (50%), Gaps = 24/202 (11%)
Query: 300 VASGSYGDLYRGTYCSQD--VAIK-VLKPERINSDMQKEFAQEVFIMRKVRHKNVVQ--- 353
+ +GS+G +Y+ C VAIK VL+ +R + +E+ IMRK+ H N+V+
Sbjct: 41 IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN-------RELQIMRKLDHCNIVRLRY 93
Query: 354 -FIGACTKPPS--LCIVTEFMSGGSVYDYLHKLKGVFKLPSL-LKVAI-DVSKGMNYLHQ 408
F + K L +V +++ H + LP + +K+ + + + + Y+H
Sbjct: 94 FFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHS 153
Query: 409 NNIIHRDLKAANLLMD-ENEVVKVADFGVAR--VKAQSGVMTAETGTYRWMAPEVI-EHK 464
I HRD+K NLL+D + V+K+ DFG A+ V+ + V + YR APE+I
Sbjct: 154 FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYR--APELIFGAT 211
Query: 465 PYDHKADVFSFGIVLWELLTGK 486
Y DV+S G VL ELL G+
Sbjct: 212 DYTSSIDVWSAGCVLAELLLGQ 233
>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3)
Length = 350
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 93/205 (45%), Gaps = 27/205 (13%)
Query: 299 KVASGSYGDLYR------GTYCS-QDVAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNV 351
++ GS+G+++R G C+ + V ++V + E E+ + +
Sbjct: 79 RLGRGSFGEVHRMKDKQTGFQCAVKKVRLEVFRVE------------ELVACAGLSSPRI 126
Query: 352 VQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNI 411
V GA + P + I E + GGS+ + ++ G L +G+ YLH I
Sbjct: 127 VPLYGAVREGPWVNIFMELLEGGSLGQLIKQM-GCLPEDRALYYLGQALEGLEYLHTRRI 185
Query: 412 IHRDLKAANLLMD-ENEVVKVADFGVARVKAQSGV----MTAE--TGTYRWMAPEVIEHK 464
+H D+KA N+L+ + + DFG A G+ +T + GT MAPEV+ K
Sbjct: 186 LHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMGK 245
Query: 465 PYDHKADVFSFGIVLWELLTGKLPY 489
P D K D++S ++ +L G P+
Sbjct: 246 PCDAKVDIWSSCCMMLHMLNGCHPW 270
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 64/202 (31%), Positives = 103/202 (50%), Gaps = 24/202 (11%)
Query: 300 VASGSYGDLYRGTYCSQD--VAIK-VLKPERINSDMQKEFAQEVFIMRKVRHKNVVQ--- 353
+ +GS+G +Y+ C VAIK VL+ +R + +E+ IMRK+ H N+V+
Sbjct: 107 IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN-------RELQIMRKLDHCNIVRLRY 159
Query: 354 -FIGACTKPPS--LCIVTEFMSGGSVYDYLHKLKGVFKLPSL-LKVAI-DVSKGMNYLHQ 408
F + K L +V +++ H + LP + +K+ + + + + Y+H
Sbjct: 160 FFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHS 219
Query: 409 NNIIHRDLKAANLLMD-ENEVVKVADFGVAR--VKAQSGVMTAETGTYRWMAPEVI-EHK 464
I HRD+K NLL+D + V+K+ DFG A+ V+ + V + YR APE+I
Sbjct: 220 FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYR--APELIFGAT 277
Query: 465 PYDHKADVFSFGIVLWELLTGK 486
Y DV+S G VL ELL G+
Sbjct: 278 DYTSSIDVWSAGCVLAELLLGQ 299
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 64/202 (31%), Positives = 103/202 (50%), Gaps = 24/202 (11%)
Query: 300 VASGSYGDLYRGTYCSQD--VAIK-VLKPERINSDMQKEFAQEVFIMRKVRHKNVVQ--- 353
+ +GS+G +Y+ C VAIK VL+ +R + +E+ IMRK+ H N+V+
Sbjct: 33 IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN-------RELQIMRKLDHCNIVRLRY 85
Query: 354 -FIGACTKPPS--LCIVTEFMSGGSVYDYLHKLKGVFKLPSL-LKVAI-DVSKGMNYLHQ 408
F + K L +V +++ H + LP + +K+ + + + + Y+H
Sbjct: 86 FFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHS 145
Query: 409 NNIIHRDLKAANLLMD-ENEVVKVADFGVAR--VKAQSGVMTAETGTYRWMAPEVI-EHK 464
I HRD+K NLL+D + V+K+ DFG A+ V+ + V + YR APE+I
Sbjct: 146 FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYR--APELIFGAT 203
Query: 465 PYDHKADVFSFGIVLWELLTGK 486
Y DV+S G VL ELL G+
Sbjct: 204 DYTSSIDVWSAGCVLAELLLGQ 225
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 64/202 (31%), Positives = 103/202 (50%), Gaps = 24/202 (11%)
Query: 300 VASGSYGDLYRGTYCSQD--VAIK-VLKPERINSDMQKEFAQEVFIMRKVRHKNVVQ--- 353
+ +GS+G +Y+ C VAIK VL+ +R + +E+ IMRK+ H N+V+
Sbjct: 66 IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN-------RELQIMRKLDHCNIVRLRY 118
Query: 354 -FIGACTKPPS--LCIVTEFMSGGSVYDYLHKLKGVFKLPSL-LKVAI-DVSKGMNYLHQ 408
F + K L +V +++ H + LP + +K+ + + + + Y+H
Sbjct: 119 FFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHS 178
Query: 409 NNIIHRDLKAANLLMD-ENEVVKVADFGVAR--VKAQSGVMTAETGTYRWMAPEVI-EHK 464
I HRD+K NLL+D + V+K+ DFG A+ V+ + V + YR APE+I
Sbjct: 179 FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYR--APELIFGAT 236
Query: 465 PYDHKADVFSFGIVLWELLTGK 486
Y DV+S G VL ELL G+
Sbjct: 237 DYTSSIDVWSAGCVLAELLLGQ 258
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 64/202 (31%), Positives = 103/202 (50%), Gaps = 24/202 (11%)
Query: 300 VASGSYGDLYRGTYCSQD--VAIK-VLKPERINSDMQKEFAQEVFIMRKVRHKNVVQ--- 353
+ +GS+G +Y+ C VAIK VL+ +R + +E+ IMRK+ H N+V+
Sbjct: 28 IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN-------RELQIMRKLDHCNIVRLRY 80
Query: 354 -FIGACTKPPS--LCIVTEFMSGGSVYDYLHKLKGVFKLPSL-LKVAI-DVSKGMNYLHQ 408
F + K L +V +++ H + LP + +K+ + + + + Y+H
Sbjct: 81 FFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHS 140
Query: 409 NNIIHRDLKAANLLMD-ENEVVKVADFGVAR--VKAQSGVMTAETGTYRWMAPEVI-EHK 464
I HRD+K NLL+D + V+K+ DFG A+ V+ + V + YR APE+I
Sbjct: 141 FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYR--APELIFGAT 198
Query: 465 PYDHKADVFSFGIVLWELLTGK 486
Y DV+S G VL ELL G+
Sbjct: 199 DYTSSIDVWSAGCVLAELLLGQ 220
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 64/202 (31%), Positives = 104/202 (51%), Gaps = 24/202 (11%)
Query: 300 VASGSYGDLYRGTYC--SQDVAIK-VLKPERINSDMQKEFAQEVFIMRKVRHKNVVQ--- 353
+ +GS+G +Y+ C + VAIK VL+ +R + +E+ IMRK+ H N+V+
Sbjct: 28 IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN-------RELQIMRKLDHCNIVRLRY 80
Query: 354 -FIGACTKPP--SLCIVTEFMSGGSVYDYLHKLKGVFKLPSL-LKVAI-DVSKGMNYLHQ 408
F + K L +V +++ H + LP + +K+ + + + + Y+H
Sbjct: 81 FFYSSGEKKDVVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHS 140
Query: 409 NNIIHRDLKAANLLMD-ENEVVKVADFGVAR--VKAQSGVMTAETGTYRWMAPEVI-EHK 464
I HRD+K NLL+D + V+K+ DFG A+ V+ + V + YR APE+I
Sbjct: 141 FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYR--APELIFGAT 198
Query: 465 PYDHKADVFSFGIVLWELLTGK 486
Y DV+S G VL ELL G+
Sbjct: 199 DYTSSIDVWSAGCVLAELLLGQ 220
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 95/201 (47%), Gaps = 16/201 (7%)
Query: 300 VASGSYGDL--YRGTYCSQDVAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQF--I 355
+ +G+YG + R Q VAIK + K +E+ I++ +H N++ I
Sbjct: 63 IGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIKDI 122
Query: 356 GACTKP----PSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNI 411
T P S+ +V + M ++ +H + + L + + +G+ Y+H +
Sbjct: 123 LRPTVPYGEFKSVYVVLDLMES-DLHQIIHSSQPL-TLEHVRYFLYQLLRGLKYMHSAQV 180
Query: 412 IHRDLKAANLLMDENEVVKVADFGVARVKAQSGV-----MTAETGTYRWMAPEV-IEHKP 465
IHRDLK +NLL++EN +K+ DFG+AR S MT T + APE+ +
Sbjct: 181 IHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEYVATRWYRAPELMLSLHE 240
Query: 466 YDHKADVFSFGIVLWELLTGK 486
Y D++S G + E+L +
Sbjct: 241 YTQAIDLWSVGCIFGEMLARR 261
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 95/201 (47%), Gaps = 16/201 (7%)
Query: 300 VASGSYGDL--YRGTYCSQDVAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQF--I 355
+ +G+YG + R Q VAIK + K +E+ I++ +H N++ I
Sbjct: 62 IGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIKDI 121
Query: 356 GACTKP----PSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNI 411
T P S+ +V + M ++ +H + + L + + +G+ Y+H +
Sbjct: 122 LRPTVPYGEFKSVYVVLDLMES-DLHQIIHSSQPL-TLEHVRYFLYQLLRGLKYMHSAQV 179
Query: 412 IHRDLKAANLLMDENEVVKVADFGVARVKAQSGV-----MTAETGTYRWMAPEV-IEHKP 465
IHRDLK +NLL++EN +K+ DFG+AR S MT T + APE+ +
Sbjct: 180 IHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEYVATRWYRAPELMLSLHE 239
Query: 466 YDHKADVFSFGIVLWELLTGK 486
Y D++S G + E+L +
Sbjct: 240 YTQAIDLWSVGCIFGEMLARR 260
>pdb|2WTK|B Chain B, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|E Chain E, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 373
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 45/185 (24%), Positives = 93/185 (50%), Gaps = 13/185 (7%)
Query: 318 VAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQFIGACTKPPSLCIVTEFMSGGSVY 377
V ++ + E +++M E+ + + H N+V + L +VT FM+ GS
Sbjct: 39 VTVRRINLEACSNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELWVVTSFMAYGSAK 98
Query: 378 DYL--HKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDLKAANLLMDENEVVKVADFG 435
D + H + G+ +L ++ + V K ++Y+H +HR +KA+++L+ + V ++
Sbjct: 99 DLICTHFMDGMNEL-AIAYILQGVLKALDYIHHMGYVHRSVKASHILISVDGKVYLSGLR 157
Query: 436 -----VARVKAQSGVMTAETGTYR---WMAPEVIEH--KPYDHKADVFSFGIVLWELLTG 485
++ + Q V + + W++PEV++ + YD K+D++S GI EL G
Sbjct: 158 SNLSMISHGQRQRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANG 217
Query: 486 KLPYE 490
+P++
Sbjct: 218 HVPFK 222
>pdb|3GNI|B Chain B, Structure Of Strad And Mo25
Length = 389
Score = 65.1 bits (157), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 45/185 (24%), Positives = 93/185 (50%), Gaps = 13/185 (7%)
Query: 318 VAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQFIGACTKPPSLCIVTEFMSGGSVY 377
V ++ + E +++M E+ + + H N+V + L +VT FM+ GS
Sbjct: 55 VTVRRINLEACSNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELWVVTSFMAYGSAK 114
Query: 378 DYL--HKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDLKAANLLMDENEVVKVADFG 435
D + H + G+ +L ++ + V K ++Y+H +HR +KA+++L+ + V ++
Sbjct: 115 DLICTHFMDGMNEL-AIAYILQGVLKALDYIHHMGYVHRSVKASHILISVDGKVYLSGLR 173
Query: 436 -----VARVKAQSGVMTAETGTYR---WMAPEVIEH--KPYDHKADVFSFGIVLWELLTG 485
++ + Q V + + W++PEV++ + YD K+D++S GI EL G
Sbjct: 174 SNLSMISHGQRQRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANG 233
Query: 486 KLPYE 490
+P++
Sbjct: 234 HVPFK 238
>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|B Chain B, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|C Chain C, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|D Chain D, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|E Chain E, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|F Chain F, Crystal Structure Of Human Pas Kinase Bound To Adp
Length = 335
Score = 65.1 bits (157), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 96/203 (47%), Gaps = 13/203 (6%)
Query: 298 SKVASGSYGDLYRGT--YCSQDVAIKVLKPERINSDMQKE------FAQEVFIMRKVRHK 349
S + SG++G ++ +++V +K +K E++ D E E+ I+ +V H
Sbjct: 30 SPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSRVEHA 89
Query: 350 NVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAI--DVSKGMNYLH 407
N+++ + +V E GS D + +L L I + + YL
Sbjct: 90 NIIKVLDIFENQGFFQLVME--KHGSGLDLFAFIDRHPRLDEPLASYIFRQLVSAVGYLR 147
Query: 408 QNNIIHRDLKAANLLMDENEVVKVADFGVARVKAQSGVMTAETGTYRWMAPEVIEHKPYD 467
+IIHRD+K N+++ E+ +K+ DFG A + + GT + APEV+ PY
Sbjct: 148 LKDIIHRDIKDENIVIAEDFTIKLIDFGSAAYLERGKLFYTFCGTIEYCAPEVLMGNPYR 207
Query: 468 H-KADVFSFGIVLWELLTGKLPY 489
+ +++S G+ L+ L+ + P+
Sbjct: 208 GPELEMWSLGVTLYTLVFEENPF 230
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 93/205 (45%), Gaps = 27/205 (13%)
Query: 299 KVASGSYGDLYR------GTYCS-QDVAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNV 351
++ GS+G+++R G C+ + V ++V + A+E+ + +
Sbjct: 100 RLGRGSFGEVHRMEDKQTGFQCAVKKVRLEVFR------------AEELMACAGLTSPRI 147
Query: 352 VQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNI 411
V GA + P + I E + GGS+ L K +G L +G+ YLH I
Sbjct: 148 VPLYGAVREGPWVNIFMELLEGGSL-GQLVKEQGCLPEDRALYYLGQALEGLEYLHSRRI 206
Query: 412 IHRDLKAANLLM-DENEVVKVADFGVARVKAQSG----VMTAE--TGTYRWMAPEVIEHK 464
+H D+KA N+L+ + + DFG A G ++T + GT MAPEV+ +
Sbjct: 207 LHGDVKADNVLLSSDGSHAALCDFGHAVCLQPDGLGKSLLTGDYIPGTETHMAPEVVLGR 266
Query: 465 PYDHKADVFSFGIVLWELLTGKLPY 489
D K DV+S ++ +L G P+
Sbjct: 267 SCDAKVDVWSSCCMMLHMLNGCHPW 291
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.317 0.133 0.392
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 15,237,102
Number of Sequences: 62578
Number of extensions: 632282
Number of successful extensions: 4377
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 1084
Number of HSP's successfully gapped in prelim test: 25
Number of HSP's that attempted gapping in prelim test: 1317
Number of HSP's gapped (non-prelim): 1139
length of query: 518
length of database: 14,973,337
effective HSP length: 103
effective length of query: 415
effective length of database: 8,527,803
effective search space: 3539038245
effective search space used: 3539038245
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 54 (25.4 bits)