Query 010086
Match_columns 518
No_of_seqs 379 out of 1697
Neff 6.1
Searched_HMMs 29240
Date Mon Mar 25 19:35:44 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/010086.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/010086hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4hg2_A Methyltransferase type 99.6 5.9E-16 2E-20 153.8 11.9 90 115-207 38-136 (257)
2 1vl5_A Unknown conserved prote 99.6 3.7E-15 1.3E-19 145.6 10.5 91 114-206 35-140 (260)
3 1pjz_A Thiopurine S-methyltran 99.6 6.6E-15 2.3E-19 140.0 11.9 119 113-233 19-177 (203)
4 3i9f_A Putative type 11 methyl 99.6 1.2E-14 4.2E-19 132.5 10.8 129 114-253 15-163 (170)
5 3ccf_A Cyclopropane-fatty-acyl 99.5 4.8E-15 1.6E-19 146.6 7.2 119 87-208 28-156 (279)
6 3h2b_A SAM-dependent methyltra 99.5 4.6E-14 1.6E-18 132.3 13.5 127 117-249 42-195 (203)
7 2yqz_A Hypothetical protein TT 99.5 2.7E-14 9.4E-19 138.5 11.8 105 101-207 23-142 (263)
8 3dh0_A SAM dependent methyltra 99.5 3.7E-14 1.3E-18 134.3 11.9 130 114-250 35-193 (219)
9 2p35_A Trans-aconitate 2-methy 99.5 1.4E-14 4.7E-19 140.5 8.9 117 89-207 6-133 (259)
10 1nkv_A Hypothetical protein YJ 99.5 3.1E-14 1E-18 138.1 11.1 98 107-206 27-140 (256)
11 3g5l_A Putative S-adenosylmeth 99.5 3.1E-14 1.1E-18 138.2 11.1 92 115-207 43-146 (253)
12 2zfu_A Nucleomethylin, cerebra 99.5 2.4E-13 8.1E-18 128.8 16.9 127 115-253 66-194 (215)
13 3bus_A REBM, methyltransferase 99.5 5.3E-14 1.8E-18 137.9 12.8 102 104-206 49-166 (273)
14 3ujc_A Phosphoethanolamine N-m 99.5 2.5E-14 8.5E-19 138.8 9.8 100 105-206 44-159 (266)
15 2p7i_A Hypothetical protein; p 99.5 1.9E-14 6.4E-19 137.7 8.4 92 115-209 41-144 (250)
16 1xxl_A YCGJ protein; structura 99.5 4.8E-14 1.6E-18 136.5 11.1 92 113-206 18-124 (239)
17 4htf_A S-adenosylmethionine-de 99.5 6.4E-14 2.2E-18 138.7 12.0 100 105-207 58-174 (285)
18 2o57_A Putative sarcosine dime 99.5 7.5E-14 2.6E-18 138.9 12.4 92 113-206 79-187 (297)
19 1xtp_A LMAJ004091AAA; SGPP, st 99.5 8E-14 2.7E-18 134.8 12.1 99 107-206 84-197 (254)
20 4e2x_A TCAB9; kijanose, tetron 99.5 8.9E-15 3E-19 153.3 5.7 131 101-233 92-254 (416)
21 2gs9_A Hypothetical protein TT 99.5 7.7E-14 2.6E-18 131.6 11.5 92 114-209 34-135 (211)
22 3l8d_A Methyltransferase; stru 99.5 5E-14 1.7E-18 135.2 10.3 93 114-208 51-155 (242)
23 3e23_A Uncharacterized protein 99.5 6.9E-14 2.4E-18 132.1 11.1 118 114-234 41-184 (211)
24 3dlc_A Putative S-adenosyl-L-m 99.5 5.2E-14 1.8E-18 132.1 10.2 103 102-206 30-148 (219)
25 2avn_A Ubiquinone/menaquinone 99.5 1.4E-13 4.9E-18 134.8 13.5 117 84-207 27-153 (260)
26 3hnr_A Probable methyltransfer 99.5 4.7E-14 1.6E-18 133.7 9.4 106 94-206 27-145 (220)
27 4gek_A TRNA (CMO5U34)-methyltr 99.5 6.3E-14 2.2E-18 139.3 10.7 91 113-206 67-178 (261)
28 3f4k_A Putative methyltransfer 99.5 1.5E-13 5.3E-18 133.2 12.4 92 113-206 43-150 (257)
29 2xvm_A Tellurite resistance pr 99.5 2.1E-13 7.3E-18 126.5 12.4 115 115-232 31-173 (199)
30 3kkz_A Uncharacterized protein 99.5 1.9E-13 6.6E-18 134.1 12.7 91 114-206 44-150 (267)
31 3ege_A Putative methyltransfer 99.5 1.5E-13 5.1E-18 134.9 11.6 91 114-207 32-131 (261)
32 3mgg_A Methyltransferase; NYSG 99.5 9.1E-14 3.1E-18 136.6 9.9 96 110-206 31-142 (276)
33 2gb4_A Thiopurine S-methyltran 99.5 1.7E-13 6E-18 135.4 11.8 118 114-233 66-228 (252)
34 3dli_A Methyltransferase; PSI- 99.5 5.2E-14 1.8E-18 136.0 7.6 94 113-208 38-142 (240)
35 3sm3_A SAM-dependent methyltra 99.5 3.3E-13 1.1E-17 128.2 12.6 91 114-206 28-141 (235)
36 3g5t_A Trans-aconitate 3-methy 99.5 1.2E-13 4.2E-18 138.0 9.6 91 114-206 34-149 (299)
37 3bkw_A MLL3908 protein, S-aden 99.5 3E-13 1E-17 129.6 11.9 93 114-207 41-145 (243)
38 3ou2_A SAM-dependent methyltra 99.4 3.9E-13 1.3E-17 126.5 12.0 92 114-208 44-148 (218)
39 2ex4_A Adrenal gland protein A 99.4 3.7E-13 1.3E-17 130.0 12.0 121 115-236 78-229 (241)
40 3vc1_A Geranyl diphosphate 2-C 99.4 4.3E-13 1.5E-17 135.2 12.5 97 107-206 107-221 (312)
41 2p8j_A S-adenosylmethionine-de 99.4 4.8E-13 1.6E-17 125.5 11.1 92 114-207 21-129 (209)
42 3dtn_A Putative methyltransfer 99.4 4.3E-13 1.5E-17 128.4 11.0 104 101-206 28-148 (234)
43 3pfg_A N-methyltransferase; N, 99.4 4.3E-13 1.5E-17 131.1 10.4 107 92-206 31-151 (263)
44 3jwg_A HEN1, methyltransferase 99.4 2.6E-13 8.8E-18 128.9 8.5 91 115-206 28-141 (219)
45 3jwh_A HEN1; methyltransferase 99.4 2.6E-13 8.8E-18 128.9 8.2 91 115-206 28-141 (217)
46 3cc8_A Putative methyltransfer 99.4 5.1E-13 1.8E-17 126.3 9.7 92 115-208 31-132 (230)
47 3ofk_A Nodulation protein S; N 99.4 7.7E-13 2.6E-17 125.1 10.7 90 114-206 49-154 (216)
48 2pxx_A Uncharacterized protein 99.4 6.7E-13 2.3E-17 124.4 9.7 94 114-208 40-161 (215)
49 3e8s_A Putative SAM dependent 99.4 4E-12 1.4E-16 119.9 14.9 90 115-207 51-153 (227)
50 3cgg_A SAM-dependent methyltra 99.4 3.6E-12 1.2E-16 117.1 14.1 116 114-231 44-174 (195)
51 4fsd_A Arsenic methyltransfera 99.4 6.2E-13 2.1E-17 138.5 9.8 92 114-206 81-203 (383)
52 3thr_A Glycine N-methyltransfe 99.4 3.7E-13 1.3E-17 133.4 7.7 92 115-208 56-177 (293)
53 1ri5_A MRNA capping enzyme; me 99.4 7.7E-13 2.6E-17 130.6 9.8 95 113-208 61-176 (298)
54 2aot_A HMT, histamine N-methyl 99.4 2.8E-13 9.7E-18 135.2 6.5 93 114-207 50-173 (292)
55 3lcc_A Putative methyl chlorid 99.4 1.5E-12 5.3E-17 125.0 11.4 126 104-233 55-208 (235)
56 3m70_A Tellurite resistance pr 99.4 1.5E-12 5.1E-17 129.0 11.3 113 116-231 120-259 (286)
57 3hem_A Cyclopropane-fatty-acyl 99.4 2E-12 6.9E-17 129.3 12.1 97 106-207 62-184 (302)
58 2a14_A Indolethylamine N-methy 99.4 1.7E-13 6E-18 135.1 4.2 104 101-206 41-197 (263)
59 1ej0_A FTSJ; methyltransferase 99.4 1.2E-11 4E-16 111.3 15.2 97 112-209 18-139 (180)
60 3gu3_A Methyltransferase; alph 99.4 1.6E-12 5.5E-17 129.2 10.4 92 114-207 20-127 (284)
61 2g72_A Phenylethanolamine N-me 99.4 4.9E-13 1.7E-17 133.0 6.7 89 116-205 71-214 (289)
62 3orh_A Guanidinoacetate N-meth 99.4 2E-13 6.9E-18 132.9 3.5 91 114-205 58-169 (236)
63 1y8c_A S-adenosylmethionine-de 99.4 1.3E-12 4.5E-17 124.9 9.0 91 115-208 36-144 (246)
64 2kw5_A SLR1183 protein; struct 99.3 2.9E-12 9.8E-17 119.9 10.9 114 114-232 28-171 (202)
65 1kpg_A CFA synthase;, cyclopro 99.3 3.4E-12 1.2E-16 126.2 11.9 96 106-206 54-168 (287)
66 2py6_A Methyltransferase FKBM; 99.3 1.9E-12 6.4E-17 136.8 10.2 161 305-507 214-386 (409)
67 1zx0_A Guanidinoacetate N-meth 99.3 6.3E-13 2.2E-17 128.4 6.0 90 114-205 58-169 (236)
68 1ve3_A Hypothetical protein PH 99.3 4.4E-12 1.5E-16 120.2 11.3 93 114-207 36-143 (227)
69 3ocj_A Putative exported prote 99.3 3.6E-12 1.2E-16 128.0 11.1 91 114-206 116-227 (305)
70 3bxo_A N,N-dimethyltransferase 99.3 3.7E-12 1.3E-16 121.7 10.3 107 92-206 21-141 (239)
71 1vlm_A SAM-dependent methyltra 99.3 4.8E-12 1.7E-16 120.6 10.7 87 116-208 47-141 (219)
72 2vdw_A Vaccinia virus capping 99.3 1.9E-12 6.5E-17 131.2 8.1 93 115-208 47-171 (302)
73 2plw_A Ribosomal RNA methyltra 99.3 5.9E-12 2E-16 117.7 10.5 96 112-208 18-156 (201)
74 3bkx_A SAM-dependent methyltra 99.3 5.7E-12 2E-16 123.5 10.8 94 113-207 40-160 (275)
75 2i62_A Nicotinamide N-methyltr 99.3 3.8E-12 1.3E-16 123.5 9.3 102 103-206 44-198 (265)
76 3ggd_A SAM-dependent methyltra 99.3 1.2E-12 4.1E-17 126.4 5.5 113 86-206 32-163 (245)
77 3bgv_A MRNA CAP guanine-N7 met 99.3 5.4E-12 1.8E-16 127.0 10.0 93 115-208 33-157 (313)
78 2fk8_A Methoxy mycolic acid sy 99.3 9.2E-12 3.1E-16 125.3 11.6 99 104-207 78-195 (318)
79 3d2l_A SAM-dependent methyltra 99.3 8.1E-12 2.8E-16 119.6 10.2 90 114-207 31-138 (243)
80 3mq2_A 16S rRNA methyltransfer 99.3 3.6E-12 1.2E-16 121.0 7.5 94 114-208 25-142 (218)
81 3mti_A RRNA methylase; SAM-dep 99.3 7.6E-12 2.6E-16 115.6 8.8 94 113-207 19-136 (185)
82 3g2m_A PCZA361.24; SAM-depende 99.3 6.7E-12 2.3E-16 125.4 9.0 92 116-209 82-193 (299)
83 3dou_A Ribosomal RNA large sub 99.2 4.9E-11 1.7E-15 112.8 13.3 134 88-232 4-164 (191)
84 1fbn_A MJ fibrillarin homologu 99.2 7.5E-11 2.6E-15 113.6 14.8 127 113-250 71-228 (230)
85 1wzn_A SAM-dependent methyltra 99.2 4.2E-11 1.4E-15 115.8 12.9 99 107-207 32-146 (252)
86 3uwp_A Histone-lysine N-methyl 99.2 3.9E-12 1.3E-16 134.2 6.0 104 100-205 157-287 (438)
87 1dus_A MJ0882; hypothetical pr 99.2 4.4E-11 1.5E-15 109.7 12.1 94 113-209 49-160 (194)
88 2nyu_A Putative ribosomal RNA 99.2 2.6E-11 8.8E-16 112.7 10.4 99 111-209 17-148 (196)
89 3p9n_A Possible methyltransfer 99.2 1.1E-11 3.9E-16 115.3 7.9 94 115-209 43-156 (189)
90 3evz_A Methyltransferase; NYSG 99.2 1E-10 3.4E-15 111.8 14.3 136 112-253 51-223 (230)
91 2fyt_A Protein arginine N-meth 99.2 2.9E-11 1E-15 124.3 11.1 91 113-203 61-168 (340)
92 4df3_A Fibrillarin-like rRNA/T 99.2 1E-11 3.5E-16 121.9 7.3 123 113-238 74-223 (233)
93 3iv6_A Putative Zn-dependent a 99.2 1.8E-11 6.1E-16 122.1 8.9 100 106-208 35-150 (261)
94 1nt2_A Fibrillarin-like PRE-rR 99.2 2.3E-11 7.8E-16 116.6 8.8 119 114-236 55-199 (210)
95 3g07_A 7SK snRNA methylphospha 99.2 1.5E-11 5E-16 123.3 7.5 90 116-206 46-220 (292)
96 3m33_A Uncharacterized protein 99.2 1.7E-11 5.8E-16 117.7 7.3 82 114-203 46-139 (226)
97 3dmg_A Probable ribosomal RNA 99.2 6.5E-11 2.2E-15 124.0 12.2 110 115-227 232-360 (381)
98 2oxt_A Nucleoside-2'-O-methylt 99.2 3.9E-11 1.3E-15 119.6 10.1 93 110-208 68-187 (265)
99 2wa2_A Non-structural protein 99.2 3.7E-11 1.3E-15 120.5 9.8 96 107-208 73-195 (276)
100 3eey_A Putative rRNA methylase 99.2 3.6E-11 1.2E-15 112.2 9.1 137 114-253 20-191 (197)
101 3lbf_A Protein-L-isoaspartate 99.2 5.6E-11 1.9E-15 111.9 10.1 88 113-208 74-176 (210)
102 1p91_A Ribosomal RNA large sub 99.2 6.8E-11 2.3E-15 115.8 11.0 87 115-209 84-181 (269)
103 3fpf_A Mtnas, putative unchara 99.2 6.3E-11 2.1E-15 120.2 11.0 92 111-208 117-224 (298)
104 3q7e_A Protein arginine N-meth 99.2 5E-11 1.7E-15 122.9 10.4 91 114-204 64-171 (349)
105 3hp7_A Hemolysin, putative; st 99.2 6.2E-11 2.1E-15 120.0 10.6 91 112-206 81-185 (291)
106 1jsx_A Glucose-inhibited divis 99.2 2.9E-10 9.9E-15 106.6 14.0 106 116-230 65-186 (207)
107 1vbf_A 231AA long hypothetical 99.1 1E-10 3.5E-15 111.8 9.7 89 113-209 67-168 (231)
108 1xdz_A Methyltransferase GIDB; 99.1 1E-10 3.6E-15 113.3 9.7 88 115-207 69-175 (240)
109 3sso_A Methyltransferase; macr 99.1 3E-11 1E-15 127.1 6.1 90 115-206 215-324 (419)
110 3r0q_C Probable protein argini 99.1 1E-10 3.6E-15 121.8 10.1 98 107-205 54-168 (376)
111 3hm2_A Precorrin-6Y C5,15-meth 99.1 1.2E-10 4E-15 106.2 8.9 90 113-207 22-128 (178)
112 3e05_A Precorrin-6Y C5,15-meth 99.1 3.2E-10 1.1E-14 106.6 12.1 91 113-207 37-143 (204)
113 2ipx_A RRNA 2'-O-methyltransfe 99.1 1.7E-10 5.8E-15 111.0 10.3 122 113-238 74-223 (233)
114 1g6q_1 HnRNP arginine N-methyl 99.1 1.9E-10 6.5E-15 117.5 11.3 90 115-204 37-143 (328)
115 3lpm_A Putative methyltransfer 99.1 3E-10 1E-14 111.5 11.7 133 114-250 46-219 (259)
116 3id6_C Fibrillarin-like rRNA/T 99.1 1.8E-10 6.1E-15 113.0 9.9 130 113-249 73-230 (232)
117 2esr_A Methyltransferase; stru 99.1 5.6E-11 1.9E-15 108.9 5.8 111 114-231 29-158 (177)
118 3htx_A HEN1; HEN1, small RNA m 99.1 1.2E-10 4.1E-15 131.4 9.4 91 115-207 720-835 (950)
119 3grz_A L11 mtase, ribosomal pr 99.1 1.8E-10 6.2E-15 108.2 9.3 112 114-233 58-186 (205)
120 2y1w_A Histone-arginine methyl 99.1 1.2E-10 4.2E-15 119.8 8.7 91 114-206 48-155 (348)
121 3q87_B N6 adenine specific DNA 99.1 2.4E-10 8.2E-15 105.4 9.7 110 115-231 22-148 (170)
122 2fca_A TRNA (guanine-N(7)-)-me 99.1 1.2E-10 4E-15 111.4 7.7 91 116-207 38-154 (213)
123 1yzh_A TRNA (guanine-N(7)-)-me 99.1 2.6E-10 9E-15 108.3 9.8 92 115-207 40-157 (214)
124 3dxy_A TRNA (guanine-N(7)-)-me 99.1 7.9E-11 2.7E-15 113.6 6.1 92 115-207 33-151 (218)
125 2fhp_A Methylase, putative; al 99.1 2E-10 6.7E-15 105.5 8.2 94 115-210 43-158 (187)
126 3njr_A Precorrin-6Y methylase; 99.1 5.9E-10 2E-14 106.0 11.8 88 113-207 52-155 (204)
127 2ift_A Putative methylase HI07 99.1 1.5E-10 5.1E-15 109.6 7.5 112 116-238 53-186 (201)
128 2p41_A Type II methyltransfera 99.1 2.7E-10 9.4E-15 115.7 9.6 96 109-209 75-194 (305)
129 2qe6_A Uncharacterized protein 99.1 6.1E-10 2.1E-14 111.1 11.9 92 116-208 77-198 (274)
130 2pwy_A TRNA (adenine-N(1)-)-me 99.1 4.3E-10 1.5E-14 108.9 10.1 96 106-207 86-199 (258)
131 3p2e_A 16S rRNA methylase; met 99.1 1.7E-10 5.7E-15 111.8 7.0 92 114-206 22-139 (225)
132 3ckk_A TRNA (guanine-N(7)-)-me 99.1 2.7E-10 9.3E-15 111.2 8.4 94 114-208 44-170 (235)
133 2ld4_A Anamorsin; methyltransf 99.0 7.4E-11 2.5E-15 108.4 3.4 82 114-205 10-100 (176)
134 3lst_A CALO1 methyltransferase 99.0 7.8E-10 2.7E-14 113.3 11.4 96 107-206 175-286 (348)
135 4dzr_A Protein-(glutamine-N5) 99.0 1.9E-10 6.4E-15 107.4 6.1 92 115-208 29-167 (215)
136 2yxe_A Protein-L-isoaspartate 99.0 6.6E-10 2.3E-14 105.0 9.9 89 113-209 74-180 (215)
137 3i53_A O-methyltransferase; CO 99.0 1.1E-09 3.7E-14 111.1 12.2 90 114-206 167-274 (332)
138 1l3i_A Precorrin-6Y methyltran 99.0 3.9E-10 1.3E-14 103.2 8.0 88 114-207 31-135 (192)
139 1dl5_A Protein-L-isoaspartate 99.0 4.6E-10 1.6E-14 113.8 9.2 88 113-207 72-176 (317)
140 4azs_A Methyltransferase WBDD; 99.0 1.8E-10 6.2E-15 126.3 6.4 89 115-205 65-172 (569)
141 3gwz_A MMCR; methyltransferase 99.0 4.4E-09 1.5E-13 108.8 16.1 96 106-205 192-306 (369)
142 1i9g_A Hypothetical protein RV 99.0 8.3E-10 2.8E-14 108.6 10.1 100 102-207 85-204 (280)
143 1yb2_A Hypothetical protein TA 99.0 5.7E-10 1.9E-14 110.5 8.9 93 108-207 102-212 (275)
144 2fpo_A Methylase YHHF; structu 99.0 4.2E-10 1.4E-14 106.6 7.5 91 116-208 54-162 (202)
145 3g89_A Ribosomal RNA small sub 99.0 9.7E-10 3.3E-14 108.1 10.3 89 115-208 79-186 (249)
146 1g8a_A Fibrillarin-like PRE-rR 99.0 4.2E-09 1.5E-13 100.5 14.5 119 114-236 71-216 (227)
147 2pjd_A Ribosomal RNA small sub 99.0 5.7E-10 2E-14 114.4 8.9 111 114-228 194-324 (343)
148 3gdh_A Trimethylguanosine synt 99.0 2.5E-11 8.7E-16 116.9 -1.4 87 116-205 78-180 (241)
149 1fp1_D Isoliquiritigenin 2'-O- 99.0 1.2E-09 4E-14 113.0 10.9 96 106-205 198-305 (372)
150 4dcm_A Ribosomal RNA large sub 99.0 1.6E-09 5.5E-14 113.0 12.0 113 114-229 220-356 (375)
151 1af7_A Chemotaxis receptor met 99.0 7.2E-10 2.5E-14 111.1 8.9 90 116-206 105-252 (274)
152 2r3s_A Uncharacterized protein 99.0 8.8E-10 3E-14 111.3 9.5 90 115-206 164-271 (335)
153 2nxc_A L11 mtase, ribosomal pr 99.0 9.5E-10 3.2E-14 108.1 9.4 112 114-233 118-245 (254)
154 2ip2_A Probable phenazine-spec 99.0 3.1E-09 1.1E-13 107.6 13.0 95 106-205 158-271 (334)
155 3mb5_A SAM-dependent methyltra 99.0 1.6E-09 5.4E-14 105.2 10.2 97 104-207 81-195 (255)
156 1x19_A CRTF-related protein; m 99.0 2.4E-09 8.2E-14 109.9 11.8 98 105-206 179-295 (359)
157 2vdv_E TRNA (guanine-N(7)-)-me 99.0 7.9E-10 2.7E-14 107.6 7.8 89 113-207 46-174 (246)
158 2b25_A Hypothetical protein; s 99.0 1.2E-09 4E-14 111.4 9.0 89 113-207 102-220 (336)
159 1jg1_A PIMT;, protein-L-isoasp 99.0 1.1E-09 3.6E-14 105.7 8.1 89 113-209 88-192 (235)
160 1qzz_A RDMB, aclacinomycin-10- 99.0 1.7E-09 5.8E-14 111.1 10.2 95 108-206 174-287 (374)
161 2bm8_A Cephalosporin hydroxyla 98.9 1.7E-09 5.7E-14 105.4 9.5 86 116-205 81-186 (236)
162 2yxd_A Probable cobalt-precorr 98.9 1.9E-09 6.4E-14 98.0 9.0 85 114-207 33-132 (183)
163 2ozv_A Hypothetical protein AT 98.9 6.7E-09 2.3E-13 102.4 13.6 95 114-208 34-172 (260)
164 1i1n_A Protein-L-isoaspartate 98.9 1.4E-09 4.8E-14 103.6 8.3 88 114-208 75-184 (226)
165 1ws6_A Methyltransferase; stru 98.9 2.7E-10 9.3E-15 102.9 3.2 92 115-210 40-151 (171)
166 1u2z_A Histone-lysine N-methyl 98.9 1.4E-09 4.7E-14 115.7 8.9 102 102-205 228-358 (433)
167 3mcz_A O-methyltransferase; ad 98.9 2.9E-09 1E-13 108.6 10.9 98 107-205 169-286 (352)
168 2xyq_A Putative 2'-O-methyl tr 98.9 6.3E-09 2.1E-13 105.2 12.9 118 101-223 47-186 (290)
169 3reo_A (ISO)eugenol O-methyltr 98.9 6.7E-09 2.3E-13 107.5 13.5 88 114-205 201-299 (368)
170 3opn_A Putative hemolysin; str 98.9 2.9E-09 1E-13 103.8 9.8 84 114-206 35-137 (232)
171 3dp7_A SAM-dependent methyltra 98.9 1.9E-09 6.3E-14 111.3 8.7 89 115-205 178-286 (363)
172 2frn_A Hypothetical protein PH 98.9 2.1E-09 7.3E-14 107.1 8.6 88 114-207 123-226 (278)
173 1r18_A Protein-L-isoaspartate( 98.9 3.1E-09 1.1E-13 101.7 9.3 87 114-208 82-196 (227)
174 1fp2_A Isoflavone O-methyltran 98.9 4.2E-09 1.4E-13 107.9 10.8 87 114-205 186-287 (352)
175 3b3j_A Histone-arginine methyl 98.9 2.1E-09 7.3E-14 115.7 8.6 91 114-206 156-263 (480)
176 1tw3_A COMT, carminomycin 4-O- 98.9 5.3E-09 1.8E-13 107.0 10.8 89 113-205 180-287 (360)
177 2yvl_A TRMI protein, hypotheti 98.9 5.9E-09 2E-13 100.2 10.5 93 108-207 83-191 (248)
178 3p9c_A Caffeic acid O-methyltr 98.9 1.1E-08 3.9E-13 105.8 13.4 88 114-205 199-297 (364)
179 2pbf_A Protein-L-isoaspartate 98.9 3.6E-09 1.2E-13 100.8 8.9 89 113-208 77-195 (227)
180 1o9g_A RRNA methyltransferase; 98.9 3.9E-09 1.3E-13 102.7 9.0 89 115-205 50-213 (250)
181 1o54_A SAM-dependent O-methylt 98.8 4.6E-09 1.6E-13 103.8 8.6 95 106-207 102-214 (277)
182 2b3t_A Protein methyltransfera 98.8 1.2E-08 4.2E-13 100.8 11.5 93 115-208 108-240 (276)
183 3bzb_A Uncharacterized protein 98.8 2.2E-09 7.6E-14 107.0 5.8 118 86-208 53-207 (281)
184 3dr5_A Putative O-methyltransf 98.8 3.6E-09 1.2E-13 102.2 6.6 97 105-205 45-162 (221)
185 3u81_A Catechol O-methyltransf 98.8 2.6E-09 9E-14 102.0 5.3 89 115-205 57-169 (221)
186 3tma_A Methyltransferase; thum 98.8 3.4E-08 1.2E-12 101.4 13.9 104 104-208 191-319 (354)
187 3ntv_A MW1564 protein; rossman 98.8 4.9E-09 1.7E-13 101.2 6.9 87 115-205 70-175 (232)
188 3bwc_A Spermidine synthase; SA 98.8 9.4E-09 3.2E-13 104.0 9.0 93 114-207 93-211 (304)
189 4hc4_A Protein arginine N-meth 98.8 1.3E-08 4.6E-13 106.3 9.7 88 116-204 83-187 (376)
190 3tfw_A Putative O-methyltransf 98.8 1E-08 3.5E-13 100.1 7.8 87 115-205 62-169 (248)
191 1zg3_A Isoflavanone 4'-O-methy 98.8 1.8E-08 6.3E-13 103.4 9.8 88 114-205 191-292 (358)
192 1ne2_A Hypothetical protein TA 98.7 3.7E-08 1.3E-12 92.1 10.3 85 114-204 49-145 (200)
193 3adn_A Spermidine synthase; am 98.7 3.3E-08 1.1E-12 99.9 10.6 91 115-207 82-199 (294)
194 3fzg_A 16S rRNA methylase; met 98.7 5.1E-09 1.8E-13 100.0 4.0 91 114-206 47-152 (200)
195 2gpy_A O-methyltransferase; st 98.7 1.1E-08 3.6E-13 98.2 6.2 87 115-205 53-159 (233)
196 1ixk_A Methyltransferase; open 98.7 1.4E-08 4.9E-13 103.1 7.3 93 114-206 116-246 (315)
197 3c3p_A Methyltransferase; NP_9 98.7 1.2E-08 4.2E-13 96.3 6.3 85 116-205 56-159 (210)
198 1zq9_A Probable dimethyladenos 98.7 9.2E-09 3.1E-13 103.1 5.5 96 105-203 17-144 (285)
199 3a27_A TYW2, uncharacterized p 98.7 3.1E-08 1.1E-12 98.4 8.8 89 113-207 116-220 (272)
200 1nv8_A HEMK protein; class I a 98.7 6E-08 2E-12 97.2 10.9 104 116-224 123-264 (284)
201 3r3h_A O-methyltransferase, SA 98.7 1.2E-08 4E-13 99.8 5.4 86 116-205 60-169 (242)
202 3evf_A RNA-directed RNA polyme 98.7 7.5E-08 2.6E-12 96.3 11.0 125 71-208 40-186 (277)
203 3tr6_A O-methyltransferase; ce 98.7 1.2E-08 4.3E-13 96.8 4.9 87 115-205 63-173 (225)
204 3giw_A Protein of unknown func 98.7 4.7E-08 1.6E-12 98.2 9.0 105 99-207 64-201 (277)
205 3duw_A OMT, O-methyltransferas 98.7 1.9E-08 6.5E-13 95.6 5.7 87 115-205 57-166 (223)
206 3ajd_A Putative methyltransfer 98.6 2.2E-08 7.6E-13 99.4 6.0 93 114-206 81-211 (274)
207 2igt_A SAM dependent methyltra 98.6 1.7E-08 5.7E-13 103.7 5.0 94 115-209 152-275 (332)
208 1yub_A Ermam, rRNA methyltrans 98.6 2.3E-09 7.7E-14 104.7 -1.8 92 113-206 26-145 (245)
209 4a6d_A Hydroxyindole O-methylt 98.6 5.9E-07 2E-11 92.4 15.8 96 107-205 170-282 (353)
210 1uir_A Polyamine aminopropyltr 98.6 4.7E-08 1.6E-12 99.3 7.2 91 115-207 76-196 (314)
211 3gjy_A Spermidine synthase; AP 98.6 7.6E-08 2.6E-12 98.4 8.1 88 118-207 91-201 (317)
212 1iy9_A Spermidine synthase; ro 98.6 6.5E-08 2.2E-12 96.5 7.4 91 115-207 74-190 (275)
213 2h00_A Methyltransferase 10 do 98.6 4.5E-08 1.5E-12 95.1 6.1 88 116-204 65-190 (254)
214 2hnk_A SAM-dependent O-methylt 98.6 3.9E-08 1.3E-12 94.9 5.6 88 115-206 59-181 (239)
215 1sui_A Caffeoyl-COA O-methyltr 98.6 3.5E-08 1.2E-12 96.7 5.2 87 115-205 78-189 (247)
216 2yxl_A PH0851 protein, 450AA l 98.6 9.9E-08 3.4E-12 101.6 9.0 93 114-206 257-389 (450)
217 1sqg_A SUN protein, FMU protei 98.6 1.3E-07 4.5E-12 99.9 9.9 93 114-206 244-374 (429)
218 1xj5_A Spermidine synthase 1; 98.6 1.3E-07 4.4E-12 97.2 9.5 91 114-206 118-235 (334)
219 1inl_A Spermidine synthase; be 98.6 7.6E-08 2.6E-12 97.0 7.3 91 115-207 89-206 (296)
220 2pt6_A Spermidine synthase; tr 98.6 9.6E-08 3.3E-12 97.5 8.1 91 115-207 115-231 (321)
221 2cmg_A Spermidine synthase; tr 98.6 2.4E-07 8.1E-12 92.0 10.6 84 115-208 71-173 (262)
222 2o07_A Spermidine synthase; st 98.5 1.3E-07 4.3E-12 95.9 8.5 90 115-206 94-209 (304)
223 2qm3_A Predicted methyltransfe 98.5 1.5E-07 5E-12 97.7 9.0 91 115-208 171-280 (373)
224 3cbg_A O-methyltransferase; cy 98.5 8.6E-08 2.9E-12 92.5 6.2 86 116-205 72-181 (232)
225 1mjf_A Spermidine synthase; sp 98.5 8.5E-08 2.9E-12 95.8 6.3 90 115-207 74-194 (281)
226 2b2c_A Spermidine synthase; be 98.5 8.8E-08 3E-12 97.6 5.7 91 115-207 107-223 (314)
227 2i7c_A Spermidine synthase; tr 98.5 2.3E-07 7.7E-12 92.8 8.4 91 115-207 77-193 (283)
228 2ih2_A Modification methylase 98.5 2.1E-06 7.3E-11 89.2 16.0 133 115-250 38-211 (421)
229 3lec_A NADB-rossmann superfami 98.5 5.1E-07 1.7E-11 88.3 10.1 131 112-250 17-164 (230)
230 2avd_A Catechol-O-methyltransf 98.5 1.2E-07 4.1E-12 90.2 5.4 87 115-205 68-178 (229)
231 2frx_A Hypothetical protein YE 98.5 1.6E-07 5.6E-12 101.0 6.9 91 116-206 117-246 (479)
232 3tm4_A TRNA (guanine N2-)-meth 98.4 4E-07 1.4E-11 94.5 9.2 97 107-207 209-330 (373)
233 1qam_A ERMC' methyltransferase 98.4 1.7E-07 5.9E-12 91.6 5.7 98 105-204 19-144 (244)
234 1wy7_A Hypothetical protein PH 98.4 1.8E-06 6.1E-11 80.7 12.4 87 114-206 47-149 (207)
235 3m6w_A RRNA methylase; rRNA me 98.4 1.2E-07 4E-12 101.8 4.7 93 114-206 99-229 (464)
236 2b78_A Hypothetical protein SM 98.4 2.2E-07 7.7E-12 97.0 6.7 94 115-208 211-333 (385)
237 3b5i_A S-adenosyl-L-methionine 98.4 8.8E-07 3E-11 92.5 10.6 90 117-207 53-226 (374)
238 3c3y_A Pfomt, O-methyltransfer 98.4 3E-07 1E-11 89.2 6.5 87 115-205 69-180 (237)
239 4dmg_A Putative uncharacterize 98.4 3.8E-07 1.3E-11 95.8 7.7 93 113-206 211-326 (393)
240 3gnl_A Uncharacterized protein 98.4 3.7E-07 1.3E-11 90.1 7.1 114 112-230 17-147 (244)
241 2as0_A Hypothetical protein PH 98.4 8.4E-08 2.9E-12 100.1 1.9 94 114-207 215-336 (396)
242 3kr9_A SAM-dependent methyltra 98.4 1.1E-06 3.8E-11 85.7 9.5 113 112-230 11-141 (225)
243 3v97_A Ribosomal RNA large sub 98.4 2.9E-07 9.8E-12 103.5 6.0 93 116-208 539-659 (703)
244 2f8l_A Hypothetical protein LM 98.3 1.2E-06 4.3E-11 89.5 10.0 91 115-207 129-257 (344)
245 2jjq_A Uncharacterized RNA met 98.3 3E-06 1E-10 89.8 13.0 114 114-238 288-415 (425)
246 1uwv_A 23S rRNA (uracil-5-)-me 98.3 1.7E-06 5.8E-11 91.6 10.0 117 114-238 284-420 (433)
247 2h1r_A Dimethyladenosine trans 98.3 9E-07 3.1E-11 89.2 7.4 62 113-177 39-115 (299)
248 3k6r_A Putative transferase PH 98.3 1.2E-06 4E-11 88.0 8.1 86 114-205 123-224 (278)
249 2yx1_A Hypothetical protein MJ 98.3 1.3E-06 4.5E-11 89.4 8.7 83 114-206 193-291 (336)
250 2efj_A 3,7-dimethylxanthine me 98.3 1.8E-06 6.3E-11 90.4 9.7 91 117-208 53-227 (384)
251 3c0k_A UPF0064 protein YCCW; P 98.3 5.9E-07 2E-11 93.8 5.9 93 115-207 219-340 (396)
252 3m4x_A NOL1/NOP2/SUN family pr 98.2 3.9E-07 1.3E-11 97.5 3.4 93 114-206 103-234 (456)
253 1wxx_A TT1595, hypothetical pr 98.2 2.6E-07 8.9E-12 96.1 1.7 91 116-207 209-326 (382)
254 3gru_A Dimethyladenosine trans 98.2 2.8E-06 9.5E-11 86.0 7.9 73 104-177 38-123 (295)
255 3frh_A 16S rRNA methylase; met 98.2 3.6E-06 1.2E-10 83.0 8.4 102 97-205 89-205 (253)
256 3gcz_A Polyprotein; flavivirus 98.1 5E-06 1.7E-10 83.3 9.0 112 87-208 69-203 (282)
257 2okc_A Type I restriction enzy 98.1 6.3E-06 2.2E-10 87.4 8.8 92 114-207 169-308 (445)
258 3eld_A Methyltransferase; flav 98.0 2.3E-05 7.7E-10 79.1 11.0 124 72-208 48-193 (300)
259 3bt7_A TRNA (uracil-5-)-methyl 98.0 1.3E-05 4.3E-10 83.0 8.1 112 117-238 214-357 (369)
260 1m6e_X S-adenosyl-L-methionnin 98.0 7.5E-06 2.6E-10 85.0 6.3 90 117-207 52-210 (359)
261 3k0b_A Predicted N6-adenine-sp 97.9 3.2E-05 1.1E-09 81.1 9.2 108 102-210 187-354 (393)
262 3tqs_A Ribosomal RNA small sub 97.8 2.7E-05 9.3E-10 77.0 7.7 69 106-176 19-104 (255)
263 3lcv_B Sisomicin-gentamicin re 97.8 2E-05 6.7E-10 78.7 6.5 105 97-205 115-235 (281)
264 3fut_A Dimethyladenosine trans 97.8 2.4E-05 8.4E-10 78.1 7.2 67 108-176 39-118 (271)
265 2qfm_A Spermine synthase; sper 97.8 1.9E-05 6.7E-10 81.9 5.8 93 116-208 188-316 (364)
266 3ldu_A Putative methylase; str 97.7 5.2E-05 1.8E-09 79.2 8.6 107 102-209 181-347 (385)
267 2px2_A Genome polyprotein [con 97.7 0.00016 5.6E-09 71.5 11.4 111 87-209 52-186 (269)
268 3ldg_A Putative uncharacterize 97.7 6.7E-05 2.3E-09 78.5 9.1 108 102-210 180-347 (384)
269 2b9e_A NOL1/NOP2/SUN domain fa 97.7 0.00012 4.1E-09 74.3 9.8 92 114-206 100-234 (309)
270 2k4m_A TR8_protein, UPF0146 pr 97.7 0.00028 9.6E-09 64.4 11.0 89 115-211 34-126 (153)
271 4auk_A Ribosomal RNA large sub 97.7 9.2E-05 3.1E-09 77.1 8.6 81 113-199 208-296 (375)
272 2r6z_A UPF0341 protein in RSP 97.6 6.1E-06 2.1E-10 81.7 -0.5 65 115-181 82-173 (258)
273 2ar0_A M.ecoki, type I restric 97.5 9E-05 3.1E-09 80.8 6.4 94 114-208 167-314 (541)
274 3r24_A NSP16, 2'-O-methyl tran 97.5 0.00099 3.4E-08 67.2 13.2 129 97-230 89-239 (344)
275 2oyr_A UPF0341 protein YHIQ; a 97.5 3.9E-05 1.3E-09 76.1 2.7 84 114-200 84-194 (258)
276 3ftd_A Dimethyladenosine trans 97.5 0.00012 4.3E-09 71.8 6.2 61 107-167 22-93 (249)
277 3p8z_A Mtase, non-structural p 97.4 0.00094 3.2E-08 65.4 11.2 119 71-206 45-186 (267)
278 2qy6_A UPF0209 protein YFCK; s 97.4 0.00012 4E-09 72.5 4.7 88 115-204 59-211 (257)
279 3lkz_A Non-structural protein 97.4 0.00068 2.3E-08 68.3 10.2 98 106-207 84-205 (321)
280 3uzu_A Ribosomal RNA small sub 97.3 0.00018 6.1E-09 72.0 5.3 53 113-166 39-106 (279)
281 2dul_A N(2),N(2)-dimethylguano 97.3 0.00017 5.9E-09 75.1 5.2 86 116-206 47-164 (378)
282 3v97_A Ribosomal RNA large sub 97.2 0.0005 1.7E-08 77.2 8.2 106 103-208 177-349 (703)
283 1qyr_A KSGA, high level kasuga 97.2 0.00017 5.9E-09 71.0 3.7 66 108-176 13-98 (252)
284 3axs_A Probable N(2),N(2)-dime 97.2 0.00023 8E-09 74.6 4.6 87 115-206 51-158 (392)
285 3khk_A Type I restriction-modi 97.0 0.0022 7.6E-08 69.9 10.8 131 118-250 246-446 (544)
286 4gqb_A Protein arginine N-meth 97.0 0.0011 3.9E-08 73.4 7.9 81 118-202 359-463 (637)
287 3ua3_A Protein arginine N-meth 97.0 0.0008 2.8E-08 75.1 6.6 84 117-202 410-530 (745)
288 3o4f_A Spermidine synthase; am 96.9 0.0034 1.2E-07 63.3 10.4 92 115-208 82-200 (294)
289 1m6y_A S-adenosyl-methyltransf 96.9 0.00048 1.6E-08 69.7 4.1 64 113-176 23-106 (301)
290 3lkd_A Type I restriction-modi 96.7 0.0041 1.4E-07 67.8 9.8 95 115-209 220-361 (542)
291 3s1s_A Restriction endonucleas 96.7 0.015 5.2E-07 66.0 14.1 136 114-250 319-517 (878)
292 3ll7_A Putative methyltransfer 96.6 0.00034 1.2E-08 73.8 0.4 92 113-206 90-209 (410)
293 3cvo_A Methyltransferase-like 96.1 0.013 4.4E-07 56.0 7.8 82 116-205 30-153 (202)
294 2wk1_A NOVP; transferase, O-me 95.7 0.028 9.6E-07 56.3 8.9 105 95-205 88-243 (282)
295 4fzv_A Putative methyltransfer 95.6 0.01 3.5E-07 61.4 5.3 93 114-206 146-284 (359)
296 3c6k_A Spermine synthase; sper 95.1 0.02 6.9E-07 59.7 5.7 91 115-207 204-332 (381)
297 2zig_A TTHA0409, putative modi 94.5 0.037 1.3E-06 55.1 5.5 46 102-149 222-267 (297)
298 2vz8_A Fatty acid synthase; tr 94.2 0.038 1.3E-06 70.1 6.0 90 115-205 1239-1347(2512)
299 1f8f_A Benzyl alcohol dehydrog 93.1 0.21 7.2E-06 50.8 8.3 93 106-205 180-288 (371)
300 4ej6_A Putative zinc-binding d 91.4 0.57 2E-05 47.8 9.0 89 110-205 176-283 (370)
301 1pl8_A Human sorbitol dehydrog 91.1 0.24 8.2E-06 50.2 5.7 89 110-205 165-272 (356)
302 3ufb_A Type I restriction-modi 91.0 0.74 2.5E-05 49.8 9.9 135 114-250 215-413 (530)
303 1e3i_A Alcohol dehydrogenase, 90.8 0.35 1.2E-05 49.3 6.7 94 105-205 184-296 (376)
304 3uko_A Alcohol dehydrogenase c 90.8 0.27 9.2E-06 50.2 5.8 93 106-205 183-294 (378)
305 2zig_A TTHA0409, putative modi 90.4 0.098 3.3E-06 52.0 2.1 54 154-207 24-98 (297)
306 1p0f_A NADP-dependent alcohol 90.2 0.31 1.1E-05 49.5 5.7 93 106-205 181-292 (373)
307 2dph_A Formaldehyde dismutase; 90.2 0.64 2.2E-05 47.8 8.1 99 105-205 175-298 (398)
308 1cdo_A Alcohol dehydrogenase; 90.2 0.33 1.1E-05 49.4 5.9 92 107-205 183-293 (374)
309 1wg8_A Predicted S-adenosylmet 90.0 0.22 7.4E-06 49.9 4.2 43 106-149 12-54 (285)
310 1kol_A Formaldehyde dehydrogen 90.0 0.22 7.6E-06 51.1 4.5 94 111-205 180-299 (398)
311 1g60_A Adenine-specific methyl 89.8 0.31 1.1E-05 47.4 5.1 45 103-149 200-244 (260)
312 3two_A Mannitol dehydrogenase; 89.7 0.64 2.2E-05 46.7 7.5 81 113-205 173-264 (348)
313 2fzw_A Alcohol dehydrogenase c 89.5 0.36 1.2E-05 49.1 5.4 93 106-205 180-291 (373)
314 2jhf_A Alcohol dehydrogenase E 89.2 0.42 1.4E-05 48.6 5.7 93 106-205 181-292 (374)
315 3m6i_A L-arabinitol 4-dehydrog 89.1 0.33 1.1E-05 49.1 4.9 89 110-205 173-282 (363)
316 3vyw_A MNMC2; tRNA wobble urid 88.8 0.81 2.8E-05 46.3 7.4 86 117-204 97-224 (308)
317 4dvj_A Putative zinc-dependent 88.7 0.81 2.8E-05 46.5 7.5 89 108-205 158-269 (363)
318 3goh_A Alcohol dehydrogenase, 88.5 0.62 2.1E-05 46.1 6.3 88 103-205 130-228 (315)
319 3fpc_A NADP-dependent alcohol 88.3 0.94 3.2E-05 45.6 7.6 89 110-205 160-265 (352)
320 3s2e_A Zinc-containing alcohol 88.3 0.45 1.5E-05 47.6 5.2 88 110-205 160-262 (340)
321 1boo_A Protein (N-4 cytosine-s 87.8 0.26 9E-06 49.7 3.1 54 154-207 17-85 (323)
322 2b5w_A Glucose dehydrogenase; 87.4 2 6.9E-05 43.2 9.4 85 113-205 163-272 (357)
323 1pqw_A Polyketide synthase; ro 86.8 1.6 5.4E-05 39.8 7.6 88 108-205 30-136 (198)
324 1e3j_A NADP(H)-dependent ketos 86.2 0.96 3.3E-05 45.5 6.2 88 110-205 162-270 (352)
325 3jv7_A ADH-A; dehydrogenase, n 85.0 0.44 1.5E-05 47.8 3.1 93 105-205 159-269 (345)
326 2dq4_A L-threonine 3-dehydroge 84.5 1.1 3.7E-05 45.0 5.6 92 106-205 155-261 (343)
327 3ip1_A Alcohol dehydrogenase, 84.5 1.2 4.2E-05 45.8 6.2 87 113-205 210-317 (404)
328 1vj0_A Alcohol dehydrogenase, 84.0 0.52 1.8E-05 48.2 3.1 88 111-205 189-297 (380)
329 2d8a_A PH0655, probable L-thre 83.3 1.1 3.8E-05 45.0 5.1 88 110-205 162-266 (348)
330 1v3u_A Leukotriene B4 12- hydr 83.1 0.7 2.4E-05 46.0 3.5 92 105-205 134-243 (333)
331 3uog_A Alcohol dehydrogenase; 82.3 0.6 2E-05 47.4 2.7 92 105-205 178-286 (363)
332 4eez_A Alcohol dehydrogenase 1 82.1 3.8 0.00013 40.7 8.5 88 111-205 158-262 (348)
333 3gms_A Putative NADPH:quinone 81.8 1.3 4.4E-05 44.3 4.9 91 106-205 134-242 (340)
334 1uuf_A YAHK, zinc-type alcohol 81.6 3.8 0.00013 41.6 8.4 82 113-205 191-287 (369)
335 1rjw_A ADH-HT, alcohol dehydro 81.4 1.6 5.6E-05 43.6 5.5 84 113-205 161-260 (339)
336 2h6e_A ADH-4, D-arabinose 1-de 81.2 0.75 2.6E-05 46.1 2.9 83 113-205 168-268 (344)
337 4df3_A Fibrillarin-like rRNA/T 81.2 1.8 6.1E-05 41.9 5.5 57 312-374 71-132 (233)
338 3dxy_A TRNA (guanine-N(7)-)-me 80.5 3.3 0.00011 38.9 7.0 65 306-376 19-92 (218)
339 1iz0_A Quinone oxidoreductase; 79.4 0.97 3.3E-05 44.3 3.0 87 104-205 114-217 (302)
340 3fbg_A Putative arginate lyase 79.3 1.7 5.7E-05 43.6 4.8 92 107-206 135-248 (346)
341 4b7c_A Probable oxidoreductase 79.0 1.1 3.9E-05 44.5 3.4 94 103-205 136-247 (336)
342 4a2c_A Galactitol-1-phosphate 78.3 1.7 5.7E-05 43.3 4.4 90 109-205 153-259 (346)
343 1piw_A Hypothetical zinc-type 77.4 0.75 2.6E-05 46.5 1.5 87 112-205 175-275 (360)
344 4eye_A Probable oxidoreductase 76.8 1.5 5.1E-05 44.0 3.5 93 103-205 146-256 (342)
345 4dcm_A Ribosomal RNA large sub 76.7 22 0.00077 36.2 12.5 84 116-206 38-136 (375)
346 3jwh_A HEN1; methyltransferase 76.7 2 6.8E-05 39.5 4.1 40 317-362 28-67 (217)
347 1jvb_A NAD(H)-dependent alcoho 76.7 4.2 0.00014 40.6 6.8 86 112-205 166-270 (347)
348 2cdc_A Glucose dehydrogenase g 76.5 4.7 0.00016 40.6 7.2 78 117-205 181-277 (366)
349 3jyn_A Quinone oxidoreductase; 76.3 4.8 0.00017 39.8 7.1 90 107-205 131-238 (325)
350 1i4w_A Mitochondrial replicati 76.2 2.5 8.4E-05 43.4 5.0 34 116-149 58-92 (353)
351 3tqh_A Quinone oxidoreductase; 75.5 1.8 6.1E-05 42.9 3.7 87 110-205 146-244 (321)
352 3e05_A Precorrin-6Y C5,15-meth 74.6 3.7 0.00013 37.3 5.3 55 315-375 37-97 (204)
353 3mq2_A 16S rRNA methyltransfer 74.5 5.5 0.00019 36.4 6.6 41 316-362 25-65 (218)
354 2hcy_A Alcohol dehydrogenase 1 74.2 1.5 5E-05 44.0 2.7 85 113-205 166-268 (347)
355 3qwb_A Probable quinone oxidor 74.0 1.5 5.2E-05 43.6 2.7 89 108-205 140-246 (334)
356 1nt2_A Fibrillarin-like PRE-rR 73.5 4.7 0.00016 37.5 5.8 54 314-373 53-110 (210)
357 1g8a_A Fibrillarin-like PRE-rR 73.0 5.2 0.00018 37.0 6.0 54 316-374 71-128 (227)
358 1g60_A Adenine-specific methyl 72.9 2.3 8E-05 41.1 3.7 21 186-206 54-74 (260)
359 1yqd_A Sinapyl alcohol dehydro 72.9 3.1 0.00011 42.1 4.8 83 114-205 184-281 (366)
360 2zb4_A Prostaglandin reductase 72.7 3.1 0.00011 41.7 4.7 92 105-205 147-259 (357)
361 2cf5_A Atccad5, CAD, cinnamyl 72.5 1.9 6.6E-05 43.5 3.1 84 113-205 176-274 (357)
362 3krt_A Crotonyl COA reductase; 71.8 9.6 0.00033 39.7 8.4 85 112-205 224-343 (456)
363 2j3h_A NADP-dependent oxidored 71.7 2.3 7.9E-05 42.3 3.4 91 105-205 144-254 (345)
364 3tka_A Ribosomal RNA small sub 71.2 3.2 0.00011 42.5 4.3 48 102-149 43-92 (347)
365 1fbn_A MJ fibrillarin homologu 70.8 6.4 0.00022 36.7 6.1 53 316-374 72-128 (230)
366 2fpo_A Methylase YHHF; structu 69.9 24 0.00082 32.1 9.8 38 318-362 54-91 (202)
367 4dup_A Quinone oxidoreductase; 69.7 2.3 8E-05 42.8 3.0 92 105-205 156-264 (353)
368 1eg2_A Modification methylase 69.7 2.6 8.9E-05 42.4 3.3 23 186-208 86-108 (319)
369 1yzh_A TRNA (guanine-N(7)-)-me 69.0 7.2 0.00025 35.7 6.0 54 317-376 40-99 (214)
370 4a27_A Synaptic vesicle membra 68.8 2.9 9.9E-05 41.9 3.4 90 107-205 133-237 (349)
371 3nx4_A Putative oxidoreductase 68.7 15 0.0005 36.0 8.5 83 114-205 143-240 (324)
372 2ipx_A RRNA 2'-O-methyltransfe 68.6 5.9 0.0002 36.9 5.3 54 315-374 74-132 (233)
373 2fca_A TRNA (guanine-N(7)-)-me 68.2 6.8 0.00023 36.3 5.6 52 318-375 38-95 (213)
374 1yb5_A Quinone oxidoreductase; 67.0 3.2 0.00011 41.8 3.3 91 104-205 158-268 (351)
375 1qor_A Quinone oxidoreductase; 66.3 2.2 7.6E-05 42.2 1.9 92 105-205 129-238 (327)
376 1xa0_A Putative NADPH dependen 66.0 9.6 0.00033 37.5 6.6 85 112-205 144-245 (328)
377 3p9n_A Possible methyltransfer 66.0 60 0.002 28.7 11.5 38 318-362 44-81 (189)
378 2eih_A Alcohol dehydrogenase; 65.9 11 0.00038 37.4 7.1 87 108-205 158-264 (343)
379 2c0c_A Zinc binding alcohol de 65.8 4 0.00014 41.2 3.8 91 106-205 153-260 (362)
380 1tt7_A YHFP; alcohol dehydroge 65.1 14 0.00047 36.4 7.5 85 112-205 145-246 (330)
381 3mgg_A Methyltransferase; NYSG 64.6 6.9 0.00024 37.1 5.0 54 316-375 35-94 (276)
382 1jsx_A Glucose-inhibited divis 63.5 11 0.00037 34.0 5.9 52 318-375 65-122 (207)
383 2j8z_A Quinone oxidoreductase; 63.4 14 0.00047 37.0 7.2 91 106-205 152-260 (354)
384 2vn8_A Reticulon-4-interacting 63.2 5.2 0.00018 40.5 4.0 84 114-205 181-279 (375)
385 3g7u_A Cytosine-specific methy 62.1 7.9 0.00027 39.8 5.2 58 118-175 3-78 (376)
386 1zsy_A Mitochondrial 2-enoyl t 61.6 44 0.0015 33.2 10.6 92 105-205 156-269 (357)
387 4hg2_A Methyltransferase type 61.1 10 0.00035 36.6 5.6 48 320-375 41-88 (257)
388 3tqs_A Ribosomal RNA small sub 61.0 7.9 0.00027 37.5 4.7 52 316-375 27-82 (255)
389 3eey_A Putative rRNA methylase 60.6 6.7 0.00023 35.2 3.9 55 315-375 19-81 (197)
390 3hm2_A Precorrin-6Y C5,15-meth 60.4 6.8 0.00023 34.2 3.8 41 316-362 23-63 (178)
391 3a27_A TYW2, uncharacterized p 60.4 11 0.00039 36.3 5.7 54 316-375 117-176 (272)
392 2plw_A Ribosomal RNA methyltra 60.2 8 0.00027 34.7 4.4 50 316-374 20-69 (201)
393 4a0s_A Octenoyl-COA reductase/ 59.5 24 0.00082 36.4 8.4 85 112-205 216-335 (447)
394 1m6y_A S-adenosyl-methyltransf 58.8 8.6 0.00029 38.3 4.7 55 316-376 24-83 (301)
395 3gaz_A Alcohol dehydrogenase s 58.7 5.4 0.00018 39.9 3.2 88 107-205 141-245 (343)
396 3slk_A Polyketide synthase ext 58.6 4.4 0.00015 45.8 2.8 87 110-205 339-441 (795)
397 4gua_A Non-structural polyprot 58.6 12 0.0004 40.9 5.7 70 162-232 216-296 (670)
398 1qam_A ERMC' methyltransferase 58.6 11 0.00037 35.9 5.2 52 316-375 28-83 (244)
399 1boo_A Protein (N-4 cytosine-s 58.4 9 0.00031 38.3 4.8 45 103-149 240-284 (323)
400 3ckk_A TRNA (guanine-N(7)-)-me 58.1 14 0.00047 35.0 5.8 129 316-469 44-190 (235)
401 2yxd_A Probable cobalt-precorr 57.8 11 0.00037 32.8 4.7 51 317-375 34-90 (183)
402 1wly_A CAAR, 2-haloacrylate re 57.0 5.6 0.00019 39.4 3.0 90 105-205 134-243 (333)
403 2vdv_E TRNA (guanine-N(7)-)-me 56.7 16 0.00054 34.3 6.0 40 316-361 47-86 (246)
404 3dtn_A Putative methyltransfer 56.6 16 0.00054 33.6 5.8 54 316-375 42-99 (234)
405 3gru_A Dimethyladenosine trans 56.2 15 0.00051 36.5 5.9 52 316-375 48-103 (295)
406 1i4w_A Mitochondrial replicati 56.2 10 0.00035 38.9 4.7 53 318-377 58-114 (353)
407 3uzu_A Ribosomal RNA small sub 56.1 7.6 0.00026 38.2 3.7 56 316-375 40-97 (279)
408 3mti_A RRNA methylase; SAM-dep 56.0 15 0.00051 32.4 5.4 51 316-374 20-76 (185)
409 3g89_A Ribosomal RNA small sub 55.7 19 0.00065 34.3 6.4 53 317-375 79-137 (249)
410 3id6_C Fibrillarin-like rRNA/T 55.6 15 0.00053 35.1 5.7 55 314-374 72-131 (232)
411 2gpy_A O-methyltransferase; st 55.5 11 0.00039 34.8 4.7 40 317-362 53-92 (233)
412 1xdz_A Methyltransferase GIDB; 54.9 18 0.00061 33.8 6.0 53 317-375 69-127 (240)
413 3qv2_A 5-cytosine DNA methyltr 54.6 14 0.00049 37.2 5.5 81 117-197 10-117 (327)
414 3pvc_A TRNA 5-methylaminomethy 54.6 6.4 0.00022 43.4 3.1 37 166-204 169-209 (689)
415 2bm8_A Cephalosporin hydroxyla 54.4 15 0.00052 34.6 5.4 50 319-374 82-136 (236)
416 3ujc_A Phosphoethanolamine N-m 54.2 15 0.00052 34.1 5.4 54 315-375 52-109 (266)
417 3ftd_A Dimethyladenosine trans 54.2 11 0.00037 36.3 4.4 53 316-375 29-83 (249)
418 3tos_A CALS11; methyltransfera 53.6 38 0.0013 33.0 8.2 38 165-205 179-216 (257)
419 1eg2_A Modification methylase 53.3 15 0.00051 36.8 5.4 46 102-149 229-274 (319)
420 3k6r_A Putative transferase PH 53.0 14 0.00047 36.5 5.0 40 317-363 124-163 (278)
421 2pwy_A TRNA (adenine-N(1)-)-me 52.9 17 0.00057 33.9 5.4 54 316-375 94-155 (258)
422 3mb5_A SAM-dependent methyltra 52.9 16 0.00055 34.1 5.3 41 316-362 91-132 (255)
423 3dh0_A SAM dependent methyltra 52.8 12 0.00043 33.8 4.4 54 316-375 35-95 (219)
424 3g07_A 7SK snRNA methylphospha 52.7 17 0.00058 35.3 5.6 39 318-362 46-84 (292)
425 1zq9_A Probable dimethyladenos 52.6 14 0.00048 36.0 5.0 52 316-375 26-84 (285)
426 3fut_A Dimethyladenosine trans 52.3 17 0.0006 35.5 5.6 51 316-375 45-98 (271)
427 2km1_A Protein DRE2; yeast, an 51.8 8 0.00027 34.4 2.7 43 162-204 53-96 (136)
428 3trk_A Nonstructural polyprote 51.5 15 0.00051 36.5 4.8 67 167-233 210-287 (324)
429 3ubt_Y Modification methylase 51.0 22 0.00074 35.0 6.1 87 118-205 1-109 (331)
430 3i9f_A Putative type 11 methyl 50.7 15 0.00052 31.8 4.5 51 316-374 15-66 (170)
431 2p35_A Trans-aconitate 2-methy 50.0 12 0.00043 34.7 4.0 53 317-375 32-85 (259)
432 3gqv_A Enoyl reductase; medium 49.3 14 0.00048 37.2 4.5 82 115-205 163-262 (371)
433 3tr6_A O-methyltransferase; ce 49.2 17 0.00058 33.2 4.7 41 317-362 63-103 (225)
434 1o54_A SAM-dependent O-methylt 49.1 17 0.00059 34.7 4.9 41 316-362 110-151 (277)
435 1ve3_A Hypothetical protein PH 49.1 17 0.0006 32.9 4.8 49 319-375 39-92 (227)
436 1gu7_A Enoyl-[acyl-carrier-pro 48.8 14 0.00047 37.0 4.3 92 105-205 155-274 (364)
437 2pt6_A Spermidine synthase; tr 48.7 1.2E+02 0.0039 30.1 11.1 38 319-362 117-154 (321)
438 2avd_A Catechol-O-methyltransf 48.7 21 0.0007 32.7 5.2 41 317-362 68-108 (229)
439 3g5t_A Trans-aconitate 3-methy 48.6 23 0.00078 34.1 5.8 53 317-375 35-96 (299)
440 2py6_A Methyltransferase FKBM; 47.9 14 0.00047 38.3 4.2 36 114-149 224-262 (409)
441 2yxe_A Protein-L-isoaspartate 47.4 20 0.00067 32.5 4.8 53 317-375 76-135 (215)
442 3ntv_A MW1564 protein; rossman 47.3 19 0.00064 33.6 4.7 40 317-362 70-109 (232)
443 4hc4_A Protein arginine N-meth 47.2 17 0.00057 37.5 4.7 51 318-375 83-139 (376)
444 1xxl_A YCGJ protein; structura 47.1 20 0.0007 33.2 5.0 52 316-375 19-76 (239)
445 3p2e_A 16S rRNA methylase; met 47.1 29 0.00098 32.4 6.0 38 316-359 22-59 (225)
446 3c85_A Putative glutathione-re 46.7 44 0.0015 29.5 7.0 85 117-206 39-139 (183)
447 1wg8_A Predicted S-adenosylmet 46.6 21 0.0007 35.6 5.0 52 315-375 19-73 (285)
448 2nyu_A Putative ribosomal RNA 46.1 22 0.00074 31.5 4.8 42 316-359 20-66 (196)
449 3orh_A Guanidinoacetate N-meth 46.1 17 0.00057 34.1 4.2 52 316-374 58-114 (236)
450 3ce6_A Adenosylhomocysteinase; 46.1 6.7 0.00023 42.0 1.5 87 112-205 269-360 (494)
451 2b3t_A Protein methyltransfera 46.0 27 0.00093 33.3 5.8 52 318-375 109-166 (276)
452 3ege_A Putative methyltransfer 45.9 23 0.00079 33.4 5.2 51 317-375 33-83 (261)
453 3p2y_A Alanine dehydrogenase/p 45.9 8.6 0.0003 39.8 2.3 88 116-205 183-301 (381)
454 2ift_A Putative methylase HI07 45.7 18 0.00063 32.9 4.3 38 318-362 53-90 (201)
455 3tfw_A Putative O-methyltransf 45.4 20 0.00069 33.8 4.7 41 317-362 62-102 (248)
456 1ws6_A Methyltransferase; stru 45.4 19 0.00065 30.9 4.2 37 318-362 41-77 (171)
457 1yb2_A Hypothetical protein TA 45.3 24 0.00082 33.7 5.3 41 316-362 108-149 (275)
458 2ozv_A Hypothetical protein AT 44.5 17 0.00059 34.7 4.1 40 317-362 35-74 (260)
459 2c7p_A Modification methylase 44.5 19 0.00063 36.2 4.5 59 117-175 11-78 (327)
460 3bkx_A SAM-dependent methyltra 44.4 21 0.00071 33.6 4.6 39 315-359 40-79 (275)
461 3njr_A Precorrin-6Y methylase; 44.1 23 0.0008 32.3 4.8 52 316-375 53-111 (204)
462 3g5l_A Putative S-adenosylmeth 43.9 27 0.00092 32.4 5.3 51 318-375 44-97 (253)
463 3ajd_A Putative methyltransfer 43.7 27 0.00094 33.5 5.4 54 317-375 82-141 (274)
464 1nkv_A Hypothetical protein YJ 43.7 26 0.00088 32.5 5.1 53 316-375 34-93 (256)
465 2hwk_A Helicase NSP2; rossman 43.3 53 0.0018 32.9 7.3 67 167-233 205-282 (320)
466 4dzr_A Protein-(glutamine-N5) 43.3 19 0.00064 32.1 3.9 40 317-362 29-68 (215)
467 1l3i_A Precorrin-6Y methyltran 43.0 26 0.00087 30.5 4.7 39 316-362 31-69 (192)
468 1h2b_A Alcohol dehydrogenase; 42.9 17 0.00057 36.4 3.9 37 112-149 182-221 (359)
469 3kr9_A SAM-dependent methyltra 42.9 15 0.00053 35.0 3.4 40 317-362 14-53 (225)
470 3dou_A Ribosomal RNA large sub 42.7 31 0.0011 31.3 5.4 47 316-375 23-69 (191)
471 1l7d_A Nicotinamide nucleotide 42.6 12 0.00041 38.3 2.7 33 116-149 171-205 (384)
472 3jwg_A HEN1, methyltransferase 41.9 21 0.00071 32.4 4.0 40 317-362 28-67 (219)
473 1vl5_A Unknown conserved prote 41.9 27 0.00091 32.7 4.9 52 316-375 35-92 (260)
474 3ggd_A SAM-dependent methyltra 41.7 27 0.00092 32.2 4.9 51 316-374 54-107 (245)
475 3ofk_A Nodulation protein S; N 41.6 31 0.0011 31.1 5.2 52 316-375 49-104 (216)
476 1kpg_A CFA synthase;, cyclopro 41.3 24 0.00081 33.6 4.5 53 316-375 62-121 (287)
477 3gu3_A Methyltransferase; alph 41.2 37 0.0013 32.5 5.9 55 316-375 20-79 (284)
478 1qyr_A KSGA, high level kasuga 41.1 22 0.00074 34.3 4.2 52 316-375 19-74 (252)
479 1wy7_A Hypothetical protein PH 41.0 31 0.001 30.9 5.0 52 317-375 48-104 (207)
480 3kkz_A Uncharacterized protein 40.6 27 0.00091 32.9 4.7 53 316-375 44-103 (267)
481 3reo_A (ISO)eugenol O-methyltr 40.3 29 0.001 34.9 5.2 52 316-374 201-252 (368)
482 4dio_A NAD(P) transhydrogenase 40.3 11 0.00038 39.4 2.1 88 116-205 189-311 (405)
483 3tka_A Ribosomal RNA small sub 40.3 17 0.00059 37.2 3.4 55 315-375 54-111 (347)
484 3l8d_A Methyltransferase; stru 40.3 35 0.0012 31.2 5.4 50 317-374 52-104 (242)
485 3duw_A OMT, O-methyltransferas 40.1 22 0.00075 32.4 3.9 41 317-362 57-97 (223)
486 2esr_A Methyltransferase; stru 39.9 28 0.00095 30.4 4.4 39 317-362 30-68 (177)
487 1yub_A Ermam, rRNA methyltrans 39.7 21 0.00071 33.6 3.8 52 316-375 27-82 (245)
488 1ej0_A FTSJ; methyltransferase 39.5 27 0.00091 29.7 4.2 47 317-374 21-68 (180)
489 1fp2_A Isoflavone O-methyltran 39.3 28 0.00095 34.6 4.8 51 317-374 187-237 (352)
490 3f4k_A Putative methyltransfer 39.3 26 0.00088 32.5 4.3 40 316-362 44-83 (257)
491 3hp7_A Hemolysin, putative; st 39.0 37 0.0013 33.7 5.6 48 318-372 85-133 (291)
492 3pi7_A NADH oxidoreductase; gr 38.7 18 0.00062 35.9 3.3 82 115-205 162-262 (349)
493 3lbf_A Protein-L-isoaspartate 38.3 46 0.0016 29.8 5.8 52 316-375 75-132 (210)
494 3pfg_A N-methyltransferase; N, 38.2 34 0.0012 31.9 5.1 51 317-375 49-100 (263)
495 2y1w_A Histone-arginine methyl 38.1 19 0.00065 36.0 3.4 53 316-375 48-106 (348)
496 4fsd_A Arsenic methyltransfera 37.8 33 0.0011 34.7 5.1 41 316-362 81-122 (383)
497 2hnk_A SAM-dependent O-methylt 37.8 27 0.00091 32.5 4.2 41 317-362 59-99 (239)
498 2b25_A Hypothetical protein; s 37.5 29 0.00098 34.2 4.6 41 316-362 103-144 (336)
499 4gek_A TRNA (CMO5U34)-methyltr 37.4 45 0.0015 32.0 5.8 56 316-375 68-130 (261)
500 3p9c_A Caffeic acid O-methyltr 37.1 35 0.0012 34.3 5.2 53 316-375 199-251 (364)
No 1
>4hg2_A Methyltransferase type 11; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MES; 1.60A {Anaeromyxobacter dehalogenans}
Probab=99.64 E-value=5.9e-16 Score=153.77 Aligned_cols=90 Identities=13% Similarity=0.087 Sum_probs=78.2
Q ss_pred CCCCeEEEEcCCCCHhHHHHHhcCCCcEEEEecCCC---------CCcEEeccCCCCCCCCCceeEEEEcCceeeccCCh
Q 010086 115 SQSAKSLCVETQYGQDVFALKEIGVEDSIGIFKKSS---------KPLVISGEGHRIPFDGNTFDFVFVGGARLEKASKP 185 (518)
Q Consensus 115 ~~~~rvLDVGcGtG~~~~~L~~~g~~~v~gID~s~~---------~~l~~~~da~~LPf~D~SFD~V~s~~~~l~~~~dp 185 (518)
..+.+|||||||+|..+..|++.+ .+|+|+|+|+. ...+++++++++||+|++||+|+|..+ +||+ ++
T Consensus 38 ~~~~~vLDvGcGtG~~~~~l~~~~-~~v~gvD~s~~ml~~a~~~~~v~~~~~~~e~~~~~~~sfD~v~~~~~-~h~~-~~ 114 (257)
T 4hg2_A 38 PARGDALDCGCGSGQASLGLAEFF-ERVHAVDPGEAQIRQALRHPRVTYAVAPAEDTGLPPASVDVAIAAQA-MHWF-DL 114 (257)
T ss_dssp SCSSEEEEESCTTTTTHHHHHTTC-SEEEEEESCHHHHHTCCCCTTEEEEECCTTCCCCCSSCEEEEEECSC-CTTC-CH
T ss_pred CCCCCEEEEcCCCCHHHHHHHHhC-CEEEEEeCcHHhhhhhhhcCCceeehhhhhhhcccCCcccEEEEeee-hhHh-hH
Confidence 456799999999999999999887 79999999841 123568999999999999999999997 8776 68
Q ss_pred HHHHHHHHhcccCCcEEEEEec
Q 010086 186 LDFASEIVRTLKPEGFAVVHVR 207 (518)
Q Consensus 186 ~~~l~Ei~RVLKPGG~lvi~~~ 207 (518)
.++++|+.|+|||||++++...
T Consensus 115 ~~~~~e~~rvLkpgG~l~~~~~ 136 (257)
T 4hg2_A 115 DRFWAELRRVARPGAVFAAVTY 136 (257)
T ss_dssp HHHHHHHHHHEEEEEEEEEEEE
T ss_pred HHHHHHHHHHcCCCCEEEEEEC
Confidence 8999999999999999988754
No 2
>1vl5_A Unknown conserved protein BH2331; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: MSE; 1.95A {Bacillus halodurans} SCOP: c.66.1.41
Probab=99.58 E-value=3.7e-15 Score=145.58 Aligned_cols=91 Identities=22% Similarity=0.266 Sum_probs=79.9
Q ss_pred CCCCCeEEEEcCCCCHhHHHHHhcCCCcEEEEecCCC---------------CCcEEeccCCCCCCCCCceeEEEEcCce
Q 010086 114 LSQSAKSLCVETQYGQDVFALKEIGVEDSIGIFKKSS---------------KPLVISGEGHRIPFDGNTFDFVFVGGAR 178 (518)
Q Consensus 114 l~~~~rvLDVGcGtG~~~~~L~~~g~~~v~gID~s~~---------------~~l~~~~da~~LPf~D~SFD~V~s~~~~ 178 (518)
++++.+|||||||+|..+..+.+.+ .+++|+|+++. ...++.+|++++||++++||+|++..+
T Consensus 35 ~~~~~~vLDiGcG~G~~~~~l~~~~-~~v~gvD~s~~~l~~a~~~~~~~~~~~v~~~~~d~~~l~~~~~~fD~V~~~~~- 112 (260)
T 1vl5_A 35 LKGNEEVLDVATGGGHVANAFAPFV-KKVVAFDLTEDILKVARAFIEGNGHQQVEYVQGDAEQMPFTDERFHIVTCRIA- 112 (260)
T ss_dssp CCSCCEEEEETCTTCHHHHHHGGGS-SEEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCC-CCCSCTTCEEEEEEESC-
T ss_pred CCCCCEEEEEeCCCCHHHHHHHHhC-CEEEEEeCCHHHHHHHHHHHHhcCCCceEEEEecHHhCCCCCCCEEEEEEhhh-
Confidence 5688999999999999999998876 59999999741 123568999999999999999999997
Q ss_pred eeccCChHHHHHHHHhcccCCcEEEEEe
Q 010086 179 LEKASKPLDFASEIVRTLKPEGFAVVHV 206 (518)
Q Consensus 179 l~~~~dp~~~l~Ei~RVLKPGG~lvi~~ 206 (518)
++|++++..+++|+.|+|||||++++..
T Consensus 113 l~~~~d~~~~l~~~~r~LkpgG~l~~~~ 140 (260)
T 1vl5_A 113 AHHFPNPASFVSEAYRVLKKGGQLLLVD 140 (260)
T ss_dssp GGGCSCHHHHHHHHHHHEEEEEEEEEEE
T ss_pred hHhcCCHHHHHHHHHHHcCCCCEEEEEE
Confidence 9999999999999999999999998864
No 3
>1pjz_A Thiopurine S-methyltransferase; polymorphism, S-adenosylmethionine, drug metabolism; NMR {Pseudomonas syringae PV} SCOP: c.66.1.36
Probab=99.58 E-value=6.6e-15 Score=139.97 Aligned_cols=119 Identities=9% Similarity=0.051 Sum_probs=89.2
Q ss_pred CCCCCCeEEEEcCCCCHhHHHHHhcCCCcEEEEecCCC---------------------------CCcEEeccCCCCCCC
Q 010086 113 YLSQSAKSLCVETQYGQDVFALKEIGVEDSIGIFKKSS---------------------------KPLVISGEGHRIPFD 165 (518)
Q Consensus 113 ll~~~~rvLDVGcGtG~~~~~L~~~g~~~v~gID~s~~---------------------------~~l~~~~da~~LPf~ 165 (518)
.++++.+|||+|||+|..+..|++.| .+|+|||+|+. ...++++|+.++|++
T Consensus 19 ~~~~~~~vLD~GCG~G~~~~~la~~g-~~V~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~l~~~ 97 (203)
T 1pjz_A 19 NVVPGARVLVPLCGKSQDMSWLSGQG-YHVVGAELSEAAVERYFTERGEQPHITSQGDFKVYAAPGIEIWCGDFFALTAR 97 (203)
T ss_dssp CCCTTCEEEETTTCCSHHHHHHHHHC-CEEEEEEECHHHHHHHHHHHCSCSEEEEETTEEEEECSSSEEEEECCSSSTHH
T ss_pred ccCCCCEEEEeCCCCcHhHHHHHHCC-CeEEEEeCCHHHHHHHHHHccCCcccccccccccccCCccEEEECccccCCcc
Confidence 35688999999999999999999888 59999999831 123568999999998
Q ss_pred C-CceeEEEEcCceeeccCCh--HHHHHHHHhcccCCcEEEE-EecCCC------c--cCchhHhhhcc-CccEEEEecc
Q 010086 166 G-NTFDFVFVGGARLEKASKP--LDFASEIVRTLKPEGFAVV-HVRAKD------E--YSFNSFLDLFN-SCKLVKSRDI 232 (518)
Q Consensus 166 D-~SFD~V~s~~~~l~~~~dp--~~~l~Ei~RVLKPGG~lvi-~~~~~~------~--~s~~~~~~lf~-~~~~v~~~~v 232 (518)
+ ++||+|++..+ |+|++.+ .++++|+.|+|||||++++ ...... . ++...+..+|. .|+++.+...
T Consensus 98 ~~~~fD~v~~~~~-l~~l~~~~~~~~l~~~~r~LkpgG~~~l~~~~~~~~~~~~~~~~~~~~el~~~~~~gf~i~~~~~~ 176 (203)
T 1pjz_A 98 DIGHCAAFYDRAA-MIALPADMRERYVQHLEALMPQACSGLLITLEYDQALLEGPPFSVPQTWLHRVMSGNWEVTKVGGQ 176 (203)
T ss_dssp HHHSEEEEEEESC-GGGSCHHHHHHHHHHHHHHSCSEEEEEEEEESSCSSSSSSCCCCCCHHHHHHTSCSSEEEEEEEES
T ss_pred cCCCEEEEEECcc-hhhCCHHHHHHHHHHHHHHcCCCcEEEEEEEecCccccCCCCCCCCHHHHHHHhcCCcEEEEeccc
Confidence 7 89999999887 8888643 3589999999999998443 332211 1 24455666666 4666666554
Q ss_pred C
Q 010086 233 D 233 (518)
Q Consensus 233 ~ 233 (518)
+
T Consensus 177 ~ 177 (203)
T 1pjz_A 177 D 177 (203)
T ss_dssp S
T ss_pred c
Confidence 4
No 4
>3i9f_A Putative type 11 methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.50A {Sulfolobus solfataricus}
Probab=99.56 E-value=1.2e-14 Score=132.47 Aligned_cols=129 Identities=16% Similarity=0.165 Sum_probs=101.8
Q ss_pred CCCCCeEEEEcCCCCHhHHHHHhcCCCcEEEEecCCC----------CCcEEeccCCCCCCCCCceeEEEEcCceeeccC
Q 010086 114 LSQSAKSLCVETQYGQDVFALKEIGVEDSIGIFKKSS----------KPLVISGEGHRIPFDGNTFDFVFVGGARLEKAS 183 (518)
Q Consensus 114 l~~~~rvLDVGcGtG~~~~~L~~~g~~~v~gID~s~~----------~~l~~~~da~~LPf~D~SFD~V~s~~~~l~~~~ 183 (518)
++++.+|||+|||+|..+..+.+.+ .+++|+|+++. ...+..+| +|+++++||+|++..+ ++|++
T Consensus 15 ~~~~~~vLDiG~G~G~~~~~l~~~~-~~v~~vD~s~~~~~~a~~~~~~v~~~~~d---~~~~~~~~D~v~~~~~-l~~~~ 89 (170)
T 3i9f_A 15 EGKKGVIVDYGCGNGFYCKYLLEFA-TKLYCIDINVIALKEVKEKFDSVITLSDP---KEIPDNSVDFILFANS-FHDMD 89 (170)
T ss_dssp SSCCEEEEEETCTTCTTHHHHHTTE-EEEEEECSCHHHHHHHHHHCTTSEEESSG---GGSCTTCEEEEEEESC-STTCS
T ss_pred cCCCCeEEEECCCCCHHHHHHHhhc-CeEEEEeCCHHHHHHHHHhCCCcEEEeCC---CCCCCCceEEEEEccc-hhccc
Confidence 5678899999999999999998876 49999999742 12344566 8899999999999998 99999
Q ss_pred ChHHHHHHHHhcccCCcEEEEEecCCC----------ccCchhHhhhccCccEEEEeccCCCCCCccceeEEEEeecccc
Q 010086 184 KPLDFASEIVRTLKPEGFAVVHVRAKD----------EYSFNSFLDLFNSCKLVKSRDIDGIDSSLPYIREIVLKKESDL 253 (518)
Q Consensus 184 dp~~~l~Ei~RVLKPGG~lvi~~~~~~----------~~s~~~~~~lf~~~~~v~~~~v~~~~~~~p~~~~vv~kK~~~~ 253 (518)
++..+++++.|+|||||++++...... .++...+..++..|+++.....+.+.+ .++++++...
T Consensus 90 ~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~Gf~~~~~~~~~~~~~------~l~~~~~~~~ 163 (170)
T 3i9f_A 90 DKQHVISEVKRILKDDGRVIIIDWRKENTGIGPPLSIRMDEKDYMGWFSNFVVEKRFNPTPYHF------GLVLKRKTSE 163 (170)
T ss_dssp CHHHHHHHHHHHEEEEEEEEEEEECSSCCSSSSCGGGCCCHHHHHHHTTTEEEEEEECSSTTEE------EEEEEECCCC
T ss_pred CHHHHHHHHHHhcCCCCEEEEEEcCccccccCchHhhhcCHHHHHHHHhCcEEEEccCCCCceE------EEEEecCCCC
Confidence 999999999999999999988743222 134456777767889999888765442 5777776444
No 5
>3ccf_A Cyclopropane-fatty-acyl-phospholipid synthase; YP_321342.1, putative methyltransferase; 1.90A {Anabaena variabilis atcc 29413}
Probab=99.54 E-value=4.8e-15 Score=146.62 Aligned_cols=119 Identities=15% Similarity=0.145 Sum_probs=84.5
Q ss_pred hccCChhHHHHHhhHHHHHHHHHHcCCCCCCCeEEEEcCCCCHhHHHHHhcCCCcEEEEecCCC----------CCcEEe
Q 010086 87 DMYTSKEWIKAVNFYSSVFQDLISEGYLSQSAKSLCVETQYGQDVFALKEIGVEDSIGIFKKSS----------KPLVIS 156 (518)
Q Consensus 87 ~~w~s~~wr~~v~~~~~l~~~L~~~gll~~~~rvLDVGcGtG~~~~~L~~~g~~~v~gID~s~~----------~~l~~~ 156 (518)
+.|+...+.+.......+.+.+.+.-.+.++.+|||||||+|..+..+.+.+ .+++|+|+++. ...++.
T Consensus 28 ~~w~a~~y~~~~~~~~~~~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~-~~v~gvD~s~~~~~~a~~~~~~~~~~~ 106 (279)
T 3ccf_A 28 NFWDATLYQDKHSFVWQYGEDLLQLLNPQPGEFILDLGCGTGQLTEKIAQSG-AEVLGTDNAATMIEKARQNYPHLHFDV 106 (279)
T ss_dssp -------------CCSSSCCHHHHHHCCCTTCEEEEETCTTSHHHHHHHHTT-CEEEEEESCHHHHHHHHHHCTTSCEEE
T ss_pred hhcCHHHHhhcchHHHHHHHHHHHHhCCCCCCEEEEecCCCCHHHHHHHhCC-CeEEEEECCHHHHHHHHhhCCCCEEEE
Confidence 3466555554332222222223332235678899999999999998888855 69999999842 234678
Q ss_pred ccCCCCCCCCCceeEEEEcCceeeccCChHHHHHHHHhcccCCcEEEEEecC
Q 010086 157 GEGHRIPFDGNTFDFVFVGGARLEKASKPLDFASEIVRTLKPEGFAVVHVRA 208 (518)
Q Consensus 157 ~da~~LPf~D~SFD~V~s~~~~l~~~~dp~~~l~Ei~RVLKPGG~lvi~~~~ 208 (518)
+|++++|+ +++||+|++..+ ++|+.++..+++|+.|+|||||++++.+..
T Consensus 107 ~d~~~~~~-~~~fD~v~~~~~-l~~~~d~~~~l~~~~~~LkpgG~l~~~~~~ 156 (279)
T 3ccf_A 107 ADARNFRV-DKPLDAVFSNAM-LHWVKEPEAAIASIHQALKSGGRFVAEFGG 156 (279)
T ss_dssp CCTTTCCC-SSCEEEEEEESC-GGGCSCHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred CChhhCCc-CCCcCEEEEcch-hhhCcCHHHHHHHHHHhcCCCcEEEEEecC
Confidence 99999998 689999999998 999999999999999999999999987643
No 6
>3h2b_A SAM-dependent methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=99.54 E-value=4.6e-14 Score=132.31 Aligned_cols=127 Identities=9% Similarity=0.012 Sum_probs=99.8
Q ss_pred CCeEEEEcCCCCHhHHHHHhcCCCcEEEEecCCC----------CCcEEeccCCCCCCCCCceeEEEEcCceeeccC--C
Q 010086 117 SAKSLCVETQYGQDVFALKEIGVEDSIGIFKKSS----------KPLVISGEGHRIPFDGNTFDFVFVGGARLEKAS--K 184 (518)
Q Consensus 117 ~~rvLDVGcGtG~~~~~L~~~g~~~v~gID~s~~----------~~l~~~~da~~LPf~D~SFD~V~s~~~~l~~~~--d 184 (518)
+.+|||||||+|..+..|++.| .+++|+|+++. ...++.+|..++|+++++||+|++..+ ++|++ +
T Consensus 42 ~~~vLDiGcG~G~~~~~l~~~~-~~v~gvD~s~~~~~~a~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~-l~~~~~~~ 119 (203)
T 3h2b_A 42 DGVILDVGSGTGRWTGHLASLG-HQIEGLEPATRLVELARQTHPSVTFHHGTITDLSDSPKRWAGLLAWYS-LIHMGPGE 119 (203)
T ss_dssp CSCEEEETCTTCHHHHHHHHTT-CCEEEECCCHHHHHHHHHHCTTSEEECCCGGGGGGSCCCEEEEEEESS-STTCCTTT
T ss_pred CCeEEEecCCCCHHHHHHHhcC-CeEEEEeCCHHHHHHHHHhCCCCeEEeCcccccccCCCCeEEEEehhh-HhcCCHHH
Confidence 7899999999999999998887 59999999742 234678999999999999999999997 99997 8
Q ss_pred hHHHHHHHHhcccCCcEEEEEecCCCc-------------cCchhHhhhcc--CccEEEEeccCCCCCCccceeEEEEee
Q 010086 185 PLDFASEIVRTLKPEGFAVVHVRAKDE-------------YSFNSFLDLFN--SCKLVKSRDIDGIDSSLPYIREIVLKK 249 (518)
Q Consensus 185 p~~~l~Ei~RVLKPGG~lvi~~~~~~~-------------~s~~~~~~lf~--~~~~v~~~~v~~~~~~~p~~~~vv~kK 249 (518)
+..+++++.|+|||||.+++.+...+. ++...+..++. .++++.+....+ -|.......++
T Consensus 120 ~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~~~~~----~p~~~l~~~~~ 195 (203)
T 3h2b_A 120 LPDALVALRMAVEDGGGLLMSFFSGPSLEPMYHPVATAYRWPLPELAQALETAGFQVTSSHWDPR----FPHAYLTAEAS 195 (203)
T ss_dssp HHHHHHHHHHTEEEEEEEEEEEECCSSCEEECCSSSCEEECCHHHHHHHHHHTTEEEEEEEECTT----SSEEEEEEEEC
T ss_pred HHHHHHHHHHHcCCCcEEEEEEccCCchhhhhchhhhhccCCHHHHHHHHHHCCCcEEEEEecCC----Ccchhhhhhhh
Confidence 899999999999999999988643321 34455666654 478888887654 35554444444
No 7
>2yqz_A Hypothetical protein TTHA0223; RNA methyltransferase, SAM, structural genomics, NPPSFA; HET: SAM; 1.80A {Thermus thermophilus} PDB: 2yr0_A
Probab=99.53 E-value=2.7e-14 Score=138.51 Aligned_cols=105 Identities=17% Similarity=0.138 Sum_probs=86.5
Q ss_pred HHHHHHHHHH-cCCCCCCCeEEEEcCCCCHhHHHHHhcCCCcEEEEecCCC--------------CCcEEeccCCCCCCC
Q 010086 101 YSSVFQDLIS-EGYLSQSAKSLCVETQYGQDVFALKEIGVEDSIGIFKKSS--------------KPLVISGEGHRIPFD 165 (518)
Q Consensus 101 ~~~l~~~L~~-~gll~~~~rvLDVGcGtG~~~~~L~~~g~~~v~gID~s~~--------------~~l~~~~da~~LPf~ 165 (518)
+..+++.+.+ ...+.++.+|||||||+|..+..+.+.+ .+++|+|+++. ...++.+|++++|++
T Consensus 23 ~~~~~~~l~~~~~~~~~~~~vLDiG~G~G~~~~~l~~~~-~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~ 101 (263)
T 2yqz_A 23 AGQIATAMASAVHPKGEEPVFLELGVGTGRIALPLIARG-YRYIALDADAAMLEVFRQKIAGVDRKVQVVQADARAIPLP 101 (263)
T ss_dssp HHHHHHHHHHHCCCSSSCCEEEEETCTTSTTHHHHHTTT-CEEEEEESCHHHHHHHHHHTTTSCTTEEEEESCTTSCCSC
T ss_pred HHHHHHHHHHhhcCCCCCCEEEEeCCcCCHHHHHHHHCC-CEEEEEECCHHHHHHHHHHhhccCCceEEEEcccccCCCC
Confidence 3344444433 3346788999999999999998888776 69999999741 123568999999999
Q ss_pred CCceeEEEEcCceeeccCChHHHHHHHHhcccCCcEEEEEec
Q 010086 166 GNTFDFVFVGGARLEKASKPLDFASEIVRTLKPEGFAVVHVR 207 (518)
Q Consensus 166 D~SFD~V~s~~~~l~~~~dp~~~l~Ei~RVLKPGG~lvi~~~ 207 (518)
+++||+|++..+ ++|++++..+++|+.|+|||||++++...
T Consensus 102 ~~~fD~v~~~~~-l~~~~~~~~~l~~~~~~L~pgG~l~~~~~ 142 (263)
T 2yqz_A 102 DESVHGVIVVHL-WHLVPDWPKVLAEAIRVLKPGGALLEGWD 142 (263)
T ss_dssp TTCEEEEEEESC-GGGCTTHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred CCCeeEEEECCc-hhhcCCHHHHHHHHHHHCCCCcEEEEEec
Confidence 999999999997 99999999999999999999999988743
No 8
>3dh0_A SAM dependent methyltransferase; cystal structure, PSI-2, NYSGXRC, structural genomics, protein structure initiative; HET: SAM; 2.72A {Aquifex aeolicus}
Probab=99.53 E-value=3.7e-14 Score=134.34 Aligned_cols=130 Identities=21% Similarity=0.232 Sum_probs=100.8
Q ss_pred CCCCCeEEEEcCCCCHhHHHHHhcC--CCcEEEEecCCC---------------CCcEEeccCCCCCCCCCceeEEEEcC
Q 010086 114 LSQSAKSLCVETQYGQDVFALKEIG--VEDSIGIFKKSS---------------KPLVISGEGHRIPFDGNTFDFVFVGG 176 (518)
Q Consensus 114 l~~~~rvLDVGcGtG~~~~~L~~~g--~~~v~gID~s~~---------------~~l~~~~da~~LPf~D~SFD~V~s~~ 176 (518)
++++.+|||+|||+|..+..+.+.+ ..+++|+|+++. ...+..+|..++|+++++||+|++..
T Consensus 35 ~~~~~~vLDiG~G~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~ 114 (219)
T 3dh0_A 35 LKEGMTVLDVGTGAGFYLPYLSKMVGEKGKVYAIDVQEEMVNYAWEKVNKLGLKNVEVLKSEENKIPLPDNTVDFIFMAF 114 (219)
T ss_dssp CCTTCEEEESSCTTCTTHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHHTCTTEEEEECBTTBCSSCSSCEEEEEEES
T ss_pred CCCCCEEEEEecCCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHcCCCcEEEEecccccCCCCCCCeeEEEeeh
Confidence 5788999999999999998887753 359999999741 12356899999999999999999999
Q ss_pred ceeeccCChHHHHHHHHhcccCCcEEEEEecCCC----------ccCchhHhhhcc--CccEEEEeccCCCCCCccceeE
Q 010086 177 ARLEKASKPLDFASEIVRTLKPEGFAVVHVRAKD----------EYSFNSFLDLFN--SCKLVKSRDIDGIDSSLPYIRE 244 (518)
Q Consensus 177 ~~l~~~~dp~~~l~Ei~RVLKPGG~lvi~~~~~~----------~~s~~~~~~lf~--~~~~v~~~~v~~~~~~~p~~~~ 244 (518)
+ ++|+.++..+++++.|+|||||.+++...... .++...+..++. .|+++......+.. ..
T Consensus 115 ~-l~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~~~~~~~------~~ 187 (219)
T 3dh0_A 115 T-FHELSEPLKFLEELKRVAKPFAYLAIIDWKKEERDKGPPPEEVYSEWEVGLILEDAGIRVGRVVEVGKYC------FG 187 (219)
T ss_dssp C-GGGCSSHHHHHHHHHHHEEEEEEEEEEEECSSCCSSSCCGGGSCCHHHHHHHHHHTTCEEEEEEEETTTE------EE
T ss_pred h-hhhcCCHHHHHHHHHHHhCCCeEEEEEEecccccccCCchhcccCHHHHHHHHHHCCCEEEEEEeeCCce------EE
Confidence 8 99999999999999999999999988743221 134455655554 57888877765432 24
Q ss_pred EEEeec
Q 010086 245 IVLKKE 250 (518)
Q Consensus 245 vv~kK~ 250 (518)
++.+|.
T Consensus 188 ~~~~k~ 193 (219)
T 3dh0_A 188 VYAMIV 193 (219)
T ss_dssp EEEECC
T ss_pred EEEEec
Confidence 666665
No 9
>2p35_A Trans-aconitate 2-methyltransferase; SAM dependent methyltrans agrobacterium tumefaciens, structural genomics, PSI-2; HET: SAH; 1.95A {Agrobacterium tumefaciens str}
Probab=99.53 E-value=1.4e-14 Score=140.54 Aligned_cols=117 Identities=14% Similarity=0.189 Sum_probs=90.3
Q ss_pred cCChhHHHHHhhHHHHHHHHHHcCCCCCCCeEEEEcCCCCHhHHHHHhc-CCCcEEEEecCCC----------CCcEEec
Q 010086 89 YTSKEWIKAVNFYSSVFQDLISEGYLSQSAKSLCVETQYGQDVFALKEI-GVEDSIGIFKKSS----------KPLVISG 157 (518)
Q Consensus 89 w~s~~wr~~v~~~~~l~~~L~~~gll~~~~rvLDVGcGtG~~~~~L~~~-g~~~v~gID~s~~----------~~l~~~~ 157 (518)
|+...|.+...........+++...+.++.+|||||||+|..+..+.+. +..+++|+|+++. ...++.+
T Consensus 6 W~~~~y~~~~~~~~~~~~~l~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~ 85 (259)
T 2p35_A 6 WSAQQYLKFEDERTRPARDLLAQVPLERVLNGYDLGCGPGNSTELLTDRYGVNVITGIDSDDDMLEKAADRLPNTNFGKA 85 (259)
T ss_dssp --CGGGBCCCCGGGHHHHHHHTTCCCSCCSSEEEETCTTTHHHHHHHHHHCTTSEEEEESCHHHHHHHHHHSTTSEEEEC
T ss_pred CCHHHHHHHHHHHHHHHHHHHHhcCCCCCCEEEEecCcCCHHHHHHHHhCCCCEEEEEECCHHHHHHHHHhCCCcEEEEC
Confidence 5544444433333334445555544677889999999999999888775 2369999999741 2346789
Q ss_pred cCCCCCCCCCceeEEEEcCceeeccCChHHHHHHHHhcccCCcEEEEEec
Q 010086 158 EGHRIPFDGNTFDFVFVGGARLEKASKPLDFASEIVRTLKPEGFAVVHVR 207 (518)
Q Consensus 158 da~~LPf~D~SFD~V~s~~~~l~~~~dp~~~l~Ei~RVLKPGG~lvi~~~ 207 (518)
|++++| ++++||+|++..+ ++|++++..+++++.|+|||||++++.+.
T Consensus 86 d~~~~~-~~~~fD~v~~~~~-l~~~~~~~~~l~~~~~~L~pgG~l~~~~~ 133 (259)
T 2p35_A 86 DLATWK-PAQKADLLYANAV-FQWVPDHLAVLSQLMDQLESGGVLAVQMP 133 (259)
T ss_dssp CTTTCC-CSSCEEEEEEESC-GGGSTTHHHHHHHHGGGEEEEEEEEEEEE
T ss_pred ChhhcC-ccCCcCEEEEeCc-hhhCCCHHHHHHHHHHhcCCCeEEEEEeC
Confidence 999999 8999999999998 99999999999999999999999999864
No 10
>1nkv_A Hypothetical protein YJHP; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.90A {Escherichia coli} SCOP: c.66.1.21
Probab=99.52 E-value=3.1e-14 Score=138.09 Aligned_cols=98 Identities=15% Similarity=0.061 Sum_probs=81.6
Q ss_pred HHHHcCCCCCCCeEEEEcCCCCHhHHHHHhcCCCcEEEEecCCC----------------CCcEEeccCCCCCCCCCcee
Q 010086 107 DLISEGYLSQSAKSLCVETQYGQDVFALKEIGVEDSIGIFKKSS----------------KPLVISGEGHRIPFDGNTFD 170 (518)
Q Consensus 107 ~L~~~gll~~~~rvLDVGcGtG~~~~~L~~~g~~~v~gID~s~~----------------~~l~~~~da~~LPf~D~SFD 170 (518)
.+.+...++++.+|||||||+|..+..+++....+++|+|+++. ...++.+|++++|+ +++||
T Consensus 27 ~l~~~~~~~~~~~VLDiGcG~G~~~~~la~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~v~~~~~d~~~~~~-~~~fD 105 (256)
T 1nkv_A 27 TLGRVLRMKPGTRILDLGSGSGEMLCTWARDHGITGTGIDMSSLFTAQAKRRAEELGVSERVHFIHNDAAGYVA-NEKCD 105 (256)
T ss_dssp HHHHHTCCCTTCEEEEETCTTCHHHHHHHHHTCCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCCTTCCC-SSCEE
T ss_pred HHHHhcCCCCCCEEEEECCCCCHHHHHHHHhcCCeEEEEeCCHHHHHHHHHHHHhcCCCcceEEEECChHhCCc-CCCCC
Confidence 33443346789999999999999998887652268999999741 12356899999998 99999
Q ss_pred EEEEcCceeeccCChHHHHHHHHhcccCCcEEEEEe
Q 010086 171 FVFVGGARLEKASKPLDFASEIVRTLKPEGFAVVHV 206 (518)
Q Consensus 171 ~V~s~~~~l~~~~dp~~~l~Ei~RVLKPGG~lvi~~ 206 (518)
+|++..+ ++|+.++..+++|+.|+|||||++++..
T Consensus 106 ~V~~~~~-~~~~~~~~~~l~~~~r~LkpgG~l~~~~ 140 (256)
T 1nkv_A 106 VAACVGA-TWIAGGFAGAEELLAQSLKPGGIMLIGE 140 (256)
T ss_dssp EEEEESC-GGGTSSSHHHHHHHTTSEEEEEEEEEEE
T ss_pred EEEECCC-hHhcCCHHHHHHHHHHHcCCCeEEEEec
Confidence 9999987 9999999999999999999999998864
No 11
>3g5l_A Putative S-adenosylmethionine dependent methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.35A {Listeria monocytogenes str}
Probab=99.52 E-value=3.1e-14 Score=138.21 Aligned_cols=92 Identities=16% Similarity=0.159 Sum_probs=81.7
Q ss_pred CCCCeEEEEcCCCCHhHHHHHhcCCCcEEEEecCCC------------CCcEEeccCCCCCCCCCceeEEEEcCceeecc
Q 010086 115 SQSAKSLCVETQYGQDVFALKEIGVEDSIGIFKKSS------------KPLVISGEGHRIPFDGNTFDFVFVGGARLEKA 182 (518)
Q Consensus 115 ~~~~rvLDVGcGtG~~~~~L~~~g~~~v~gID~s~~------------~~l~~~~da~~LPf~D~SFD~V~s~~~~l~~~ 182 (518)
.++.+|||||||+|..+..+++.|..+++|+|+++. ...++.+|+..+|+++++||+|++..+ ++|+
T Consensus 43 ~~~~~vLD~GcG~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~-l~~~ 121 (253)
T 3g5l_A 43 FNQKTVLDLGCGFGWHCIYAAEHGAKKVLGIDLSERMLTEAKRKTTSPVVCYEQKAIEDIAIEPDAYNVVLSSLA-LHYI 121 (253)
T ss_dssp CTTCEEEEETCTTCHHHHHHHHTTCSEEEEEESCHHHHHHHHHHCCCTTEEEEECCGGGCCCCTTCEEEEEEESC-GGGC
T ss_pred cCCCEEEEECCCCCHHHHHHHHcCCCEEEEEECCHHHHHHHHHhhccCCeEEEEcchhhCCCCCCCeEEEEEchh-hhhh
Confidence 478899999999999999998887569999999741 123578999999999999999999997 9999
Q ss_pred CChHHHHHHHHhcccCCcEEEEEec
Q 010086 183 SKPLDFASEIVRTLKPEGFAVVHVR 207 (518)
Q Consensus 183 ~dp~~~l~Ei~RVLKPGG~lvi~~~ 207 (518)
.++..+++++.|+|||||++++.+.
T Consensus 122 ~~~~~~l~~~~~~LkpgG~l~~~~~ 146 (253)
T 3g5l_A 122 ASFDDICKKVYINLKSSGSFIFSVE 146 (253)
T ss_dssp SCHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred hhHHHHHHHHHHHcCCCcEEEEEeC
Confidence 9999999999999999999999764
No 12
>2zfu_A Nucleomethylin, cerebral protein 1; nucleolar protein, SAM-binding protein, protein structure, N phosphoprotein, nuclear protein; HET: SAH; 2.00A {Homo sapiens}
Probab=99.52 E-value=2.4e-13 Score=128.79 Aligned_cols=127 Identities=17% Similarity=0.104 Sum_probs=98.3
Q ss_pred CCCCeEEEEcCCCCHhHHHHHhcCCCcEEEEecCCCCCcEEeccCCCCCCCCCceeEEEEcCceeeccCChHHHHHHHHh
Q 010086 115 SQSAKSLCVETQYGQDVFALKEIGVEDSIGIFKKSSKPLVISGEGHRIPFDGNTFDFVFVGGARLEKASKPLDFASEIVR 194 (518)
Q Consensus 115 ~~~~rvLDVGcGtG~~~~~L~~~g~~~v~gID~s~~~~l~~~~da~~LPf~D~SFD~V~s~~~~l~~~~dp~~~l~Ei~R 194 (518)
.++.+|||||||+|..+..+ + .+++|+|+++....+..+|+.++|+++++||+|++..+ +|+ .++..+++++.|
T Consensus 66 ~~~~~vLDiG~G~G~~~~~l---~-~~v~~~D~s~~~~~~~~~d~~~~~~~~~~fD~v~~~~~-l~~-~~~~~~l~~~~~ 139 (215)
T 2zfu_A 66 PASLVVADFGCGDCRLASSI---R-NPVHCFDLASLDPRVTVCDMAQVPLEDESVDVAVFCLS-LMG-TNIRDFLEEANR 139 (215)
T ss_dssp CTTSCEEEETCTTCHHHHHC---C-SCEEEEESSCSSTTEEESCTTSCSCCTTCEEEEEEESC-CCS-SCHHHHHHHHHH
T ss_pred CCCCeEEEECCcCCHHHHHh---h-ccEEEEeCCCCCceEEEeccccCCCCCCCEeEEEEehh-ccc-cCHHHHHHHHHH
Confidence 57789999999999988776 2 68999999987667789999999999999999999987 865 889999999999
Q ss_pred cccCCcEEEEEecCCCccCchhHhhhcc--CccEEEEeccCCCCCCccceeEEEEeecccc
Q 010086 195 TLKPEGFAVVHVRAKDEYSFNSFLDLFN--SCKLVKSRDIDGIDSSLPYIREIVLKKESDL 253 (518)
Q Consensus 195 VLKPGG~lvi~~~~~~~~s~~~~~~lf~--~~~~v~~~~v~~~~~~~p~~~~vv~kK~~~~ 253 (518)
+|||||.+++........+...+..++. .++++......+ +...++++|....
T Consensus 140 ~L~~gG~l~i~~~~~~~~~~~~~~~~l~~~Gf~~~~~~~~~~------~~~~~~~~k~~~~ 194 (215)
T 2zfu_A 140 VLKPGGLLKVAEVSSRFEDVRTFLRAVTKLGFKIVSKDLTNS------HFFLFDFQKTGPP 194 (215)
T ss_dssp HEEEEEEEEEEECGGGCSCHHHHHHHHHHTTEEEEEEECCST------TCEEEEEEECSSC
T ss_pred hCCCCeEEEEEEcCCCCCCHHHHHHHHHHCCCEEEEEecCCC------eEEEEEEEecCcc
Confidence 9999999998754333334455555554 467777554322 2335778886444
No 13
>3bus_A REBM, methyltransferase; rebeccamycin synthesis; HET: SAH; 2.65A {Lechevalieria aerocolonigenes}
Probab=99.52 E-value=5.3e-14 Score=137.90 Aligned_cols=102 Identities=18% Similarity=0.231 Sum_probs=84.9
Q ss_pred HHHHHHHcCCCCCCCeEEEEcCCCCHhHHHHHhcCCCcEEEEecCCC----------------CCcEEeccCCCCCCCCC
Q 010086 104 VFQDLISEGYLSQSAKSLCVETQYGQDVFALKEIGVEDSIGIFKKSS----------------KPLVISGEGHRIPFDGN 167 (518)
Q Consensus 104 l~~~L~~~gll~~~~rvLDVGcGtG~~~~~L~~~g~~~v~gID~s~~----------------~~l~~~~da~~LPf~D~ 167 (518)
+.+.+++...++++.+|||||||+|..+..+++....+++|+|+++. ...++.+|..++||+++
T Consensus 49 ~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 128 (273)
T 3bus_A 49 LTDEMIALLDVRSGDRVLDVGCGIGKPAVRLATARDVRVTGISISRPQVNQANARATAAGLANRVTFSYADAMDLPFEDA 128 (273)
T ss_dssp HHHHHHHHSCCCTTCEEEEESCTTSHHHHHHHHHSCCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCCSCTT
T ss_pred HHHHHHHhcCCCCCCEEEEeCCCCCHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHHHhcCCCcceEEEECccccCCCCCC
Confidence 33444444456788999999999999998887643379999999741 12356899999999999
Q ss_pred ceeEEEEcCceeeccCChHHHHHHHHhcccCCcEEEEEe
Q 010086 168 TFDFVFVGGARLEKASKPLDFASEIVRTLKPEGFAVVHV 206 (518)
Q Consensus 168 SFD~V~s~~~~l~~~~dp~~~l~Ei~RVLKPGG~lvi~~ 206 (518)
+||+|++..+ ++|++++..+++|+.|+|||||++++..
T Consensus 129 ~fD~v~~~~~-l~~~~~~~~~l~~~~~~L~pgG~l~i~~ 166 (273)
T 3bus_A 129 SFDAVWALES-LHHMPDRGRALREMARVLRPGGTVAIAD 166 (273)
T ss_dssp CEEEEEEESC-TTTSSCHHHHHHHHHTTEEEEEEEEEEE
T ss_pred CccEEEEech-hhhCCCHHHHHHHHHHHcCCCeEEEEEE
Confidence 9999999998 9999999999999999999999998874
No 14
>3ujc_A Phosphoethanolamine N-methyltransferase; parasite; HET: PC; 1.19A {Plasmodium falciparum} PDB: 3uj9_A* 3uj6_A* 3uj7_A* 3uj8_A* 3uja_A 3ujb_A* 4fgz_A* 3ujd_A*
Probab=99.52 E-value=2.5e-14 Score=138.83 Aligned_cols=100 Identities=20% Similarity=0.269 Sum_probs=84.4
Q ss_pred HHHHHHcCCCCCCCeEEEEcCCCCHhHHHHHhc-CCCcEEEEecCCC-------------CCcEEeccCCCCCCCCCcee
Q 010086 105 FQDLISEGYLSQSAKSLCVETQYGQDVFALKEI-GVEDSIGIFKKSS-------------KPLVISGEGHRIPFDGNTFD 170 (518)
Q Consensus 105 ~~~L~~~gll~~~~rvLDVGcGtG~~~~~L~~~-g~~~v~gID~s~~-------------~~l~~~~da~~LPf~D~SFD 170 (518)
.+.+++...++++.+|||||||+|..+..+++. + .+++|+|+++. ...++.+|..++|+++++||
T Consensus 44 ~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~-~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~d~~~~~~~~~~fD 122 (266)
T 3ujc_A 44 TKKILSDIELNENSKVLDIGSGLGGGCMYINEKYG-AHTHGIDICSNIVNMANERVSGNNKIIFEANDILTKEFPENNFD 122 (266)
T ss_dssp HHHHTTTCCCCTTCEEEEETCTTSHHHHHHHHHHC-CEEEEEESCHHHHHHHHHTCCSCTTEEEEECCTTTCCCCTTCEE
T ss_pred HHHHHHhcCCCCCCEEEEECCCCCHHHHHHHHHcC-CEEEEEeCCHHHHHHHHHHhhcCCCeEEEECccccCCCCCCcEE
Confidence 344455445678899999999999999888875 5 69999999841 12356899999999999999
Q ss_pred EEEEcCceeecc--CChHHHHHHHHhcccCCcEEEEEe
Q 010086 171 FVFVGGARLEKA--SKPLDFASEIVRTLKPEGFAVVHV 206 (518)
Q Consensus 171 ~V~s~~~~l~~~--~dp~~~l~Ei~RVLKPGG~lvi~~ 206 (518)
+|++..+ ++|+ .++..+++++.|+|||||++++..
T Consensus 123 ~v~~~~~-l~~~~~~~~~~~l~~~~~~L~pgG~l~~~~ 159 (266)
T 3ujc_A 123 LIYSRDA-ILALSLENKNKLFQKCYKWLKPTGTLLITD 159 (266)
T ss_dssp EEEEESC-GGGSCHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred EEeHHHH-HHhcChHHHHHHHHHHHHHcCCCCEEEEEE
Confidence 9999997 9999 788899999999999999998874
No 15
>2p7i_A Hypothetical protein; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; 1.74A {Pectobacterium atrosepticum SCRI1043} SCOP: c.66.1.41 PDB: 2p7h_A
Probab=99.51 E-value=1.9e-14 Score=137.67 Aligned_cols=92 Identities=14% Similarity=0.047 Sum_probs=79.4
Q ss_pred CCCCeEEEEcCCCCHhHHHHHhcCCCcEEEEecCCC-----------CCcEEeccCCCCCCCCCceeEEEEcCceeeccC
Q 010086 115 SQSAKSLCVETQYGQDVFALKEIGVEDSIGIFKKSS-----------KPLVISGEGHRIPFDGNTFDFVFVGGARLEKAS 183 (518)
Q Consensus 115 ~~~~rvLDVGcGtG~~~~~L~~~g~~~v~gID~s~~-----------~~l~~~~da~~LPf~D~SFD~V~s~~~~l~~~~ 183 (518)
.++.+|||||||+|..+..+++.+ .+++|+|+++. ...++.+|++++ +++++||+|++..+ ++|++
T Consensus 41 ~~~~~vLDiGcG~G~~~~~l~~~~-~~v~gvD~s~~~~~~a~~~~~~~v~~~~~d~~~~-~~~~~fD~v~~~~~-l~~~~ 117 (250)
T 2p7i_A 41 FRPGNLLELGSFKGDFTSRLQEHF-NDITCVEASEEAISHAQGRLKDGITYIHSRFEDA-QLPRRYDNIVLTHV-LEHID 117 (250)
T ss_dssp CCSSCEEEESCTTSHHHHHHTTTC-SCEEEEESCHHHHHHHHHHSCSCEEEEESCGGGC-CCSSCEEEEEEESC-GGGCS
T ss_pred cCCCcEEEECCCCCHHHHHHHHhC-CcEEEEeCCHHHHHHHHHhhhCCeEEEEccHHHc-CcCCcccEEEEhhH-HHhhc
Confidence 367899999999999999998876 58999999842 234567888887 68899999999998 99999
Q ss_pred ChHHHHHHHH-hcccCCcEEEEEecCC
Q 010086 184 KPLDFASEIV-RTLKPEGFAVVHVRAK 209 (518)
Q Consensus 184 dp~~~l~Ei~-RVLKPGG~lvi~~~~~ 209 (518)
+|..+++|+. |+|||||++++.+...
T Consensus 118 ~~~~~l~~~~~~~LkpgG~l~i~~~~~ 144 (250)
T 2p7i_A 118 DPVALLKRINDDWLAEGGRLFLVCPNA 144 (250)
T ss_dssp SHHHHHHHHHHTTEEEEEEEEEEEECT
T ss_pred CHHHHHHHHHHHhcCCCCEEEEEcCCh
Confidence 9999999999 9999999999987543
No 16
>1xxl_A YCGJ protein; structural genomics, protein structure initiative, PSI, NEW YORK SGX research center for structural genomics, nysgxrc; 2.10A {Bacillus subtilis} SCOP: c.66.1.41 PDB: 2glu_A*
Probab=99.51 E-value=4.8e-14 Score=136.53 Aligned_cols=92 Identities=18% Similarity=0.255 Sum_probs=81.4
Q ss_pred CCCCCCeEEEEcCCCCHhHHHHHhcCCCcEEEEecCCC---------------CCcEEeccCCCCCCCCCceeEEEEcCc
Q 010086 113 YLSQSAKSLCVETQYGQDVFALKEIGVEDSIGIFKKSS---------------KPLVISGEGHRIPFDGNTFDFVFVGGA 177 (518)
Q Consensus 113 ll~~~~rvLDVGcGtG~~~~~L~~~g~~~v~gID~s~~---------------~~l~~~~da~~LPf~D~SFD~V~s~~~ 177 (518)
-++++.+|||||||+|..+..+.+.+ .+++|+|+++. ...++.+|++++||++++||+|++..+
T Consensus 18 ~~~~~~~vLDiGcG~G~~~~~l~~~~-~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~v~~~~~ 96 (239)
T 1xxl_A 18 ECRAEHRVLDIGAGAGHTALAFSPYV-QECIGVDATKEMVEVASSFAQEKGVENVRFQQGTAESLPFPDDSFDIITCRYA 96 (239)
T ss_dssp TCCTTCEEEEESCTTSHHHHHHGGGS-SEEEEEESCHHHHHHHHHHHHHHTCCSEEEEECBTTBCCSCTTCEEEEEEESC
T ss_pred CcCCCCEEEEEccCcCHHHHHHHHhC-CEEEEEECCHHHHHHHHHHHHHcCCCCeEEEecccccCCCCCCcEEEEEECCc
Confidence 46789999999999999999888876 69999999741 123568999999999999999999987
Q ss_pred eeeccCChHHHHHHHHhcccCCcEEEEEe
Q 010086 178 RLEKASKPLDFASEIVRTLKPEGFAVVHV 206 (518)
Q Consensus 178 ~l~~~~dp~~~l~Ei~RVLKPGG~lvi~~ 206 (518)
++|+.++..+++|+.|+|||||++++..
T Consensus 97 -l~~~~~~~~~l~~~~~~LkpgG~l~~~~ 124 (239)
T 1xxl_A 97 -AHHFSDVRKAVREVARVLKQDGRFLLVD 124 (239)
T ss_dssp -GGGCSCHHHHHHHHHHHEEEEEEEEEEE
T ss_pred -hhhccCHHHHHHHHHHHcCCCcEEEEEE
Confidence 9999999999999999999999998864
No 17
>4htf_A S-adenosylmethionine-dependent methyltransferase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE SAM; 1.60A {Escherichia coli}
Probab=99.51 E-value=6.4e-14 Score=138.74 Aligned_cols=100 Identities=16% Similarity=0.184 Sum_probs=83.1
Q ss_pred HHHHHHcCCCCCCCeEEEEcCCCCHhHHHHHhcCCCcEEEEecCCC----------------CCcEEeccCCCCC-CCCC
Q 010086 105 FQDLISEGYLSQSAKSLCVETQYGQDVFALKEIGVEDSIGIFKKSS----------------KPLVISGEGHRIP-FDGN 167 (518)
Q Consensus 105 ~~~L~~~gll~~~~rvLDVGcGtG~~~~~L~~~g~~~v~gID~s~~----------------~~l~~~~da~~LP-f~D~ 167 (518)
+..++... ..++.+|||||||+|..+..+++.| .+++|+|+++. ...++.+|..++| ++++
T Consensus 58 l~~~l~~~-~~~~~~vLDiGcG~G~~~~~l~~~~-~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~ 135 (285)
T 4htf_A 58 LDRVLAEM-GPQKLRVLDAGGGEGQTAIKMAERG-HQVILCDLSAQMIDRAKQAAEAKGVSDNMQFIHCAAQDVASHLET 135 (285)
T ss_dssp HHHHHHHT-CSSCCEEEEETCTTCHHHHHHHHTT-CEEEEEESCHHHHHHHHHHHHC-CCGGGEEEEESCGGGTGGGCSS
T ss_pred HHHHHHhc-CCCCCEEEEeCCcchHHHHHHHHCC-CEEEEEECCHHHHHHHHHHHHhcCCCcceEEEEcCHHHhhhhcCC
Confidence 33444332 2346899999999999999998886 69999999841 1225689999998 8999
Q ss_pred ceeEEEEcCceeeccCChHHHHHHHHhcccCCcEEEEEec
Q 010086 168 TFDFVFVGGARLEKASKPLDFASEIVRTLKPEGFAVVHVR 207 (518)
Q Consensus 168 SFD~V~s~~~~l~~~~dp~~~l~Ei~RVLKPGG~lvi~~~ 207 (518)
+||+|++..+ ++|++++..+++|+.|+|||||++++.+.
T Consensus 136 ~fD~v~~~~~-l~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 174 (285)
T 4htf_A 136 PVDLILFHAV-LEWVADPRSVLQTLWSVLRPGGVLSLMFY 174 (285)
T ss_dssp CEEEEEEESC-GGGCSCHHHHHHHHHHTEEEEEEEEEEEE
T ss_pred CceEEEECch-hhcccCHHHHHHHHHHHcCCCeEEEEEEe
Confidence 9999999998 99999999999999999999999999864
No 18
>2o57_A Putative sarcosine dimethylglycine methyltransferase; structural genomics, protein structure initiative, PSI-2; 1.95A {Galdieria sulphuraria} SCOP: c.66.1.18
Probab=99.50 E-value=7.5e-14 Score=138.87 Aligned_cols=92 Identities=25% Similarity=0.314 Sum_probs=80.9
Q ss_pred CCCCCCeEEEEcCCCCHhHHHHHhc-CCCcEEEEecCCC----------------CCcEEeccCCCCCCCCCceeEEEEc
Q 010086 113 YLSQSAKSLCVETQYGQDVFALKEI-GVEDSIGIFKKSS----------------KPLVISGEGHRIPFDGNTFDFVFVG 175 (518)
Q Consensus 113 ll~~~~rvLDVGcGtG~~~~~L~~~-g~~~v~gID~s~~----------------~~l~~~~da~~LPf~D~SFD~V~s~ 175 (518)
.+.++.+|||||||+|..+..+.+. | .+++|+|+++. ...++.+|..++||++++||+|++.
T Consensus 79 ~~~~~~~vLDiGcG~G~~~~~l~~~~~-~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~ 157 (297)
T 2o57_A 79 VLQRQAKGLDLGAGYGGAARFLVRKFG-VSIDCLNIAPVQNKRNEEYNNQAGLADNITVKYGSFLEIPCEDNSYDFIWSQ 157 (297)
T ss_dssp CCCTTCEEEEETCTTSHHHHHHHHHHC-CEEEEEESCHHHHHHHHHHHHHHTCTTTEEEEECCTTSCSSCTTCEEEEEEE
T ss_pred CCCCCCEEEEeCCCCCHHHHHHHHHhC-CEEEEEeCCHHHHHHHHHHHHhcCCCcceEEEEcCcccCCCCCCCEeEEEec
Confidence 4678899999999999999888775 6 59999999741 1235689999999999999999999
Q ss_pred CceeeccCChHHHHHHHHhcccCCcEEEEEe
Q 010086 176 GARLEKASKPLDFASEIVRTLKPEGFAVVHV 206 (518)
Q Consensus 176 ~~~l~~~~dp~~~l~Ei~RVLKPGG~lvi~~ 206 (518)
.+ ++|++++..+++|+.|+|||||++++..
T Consensus 158 ~~-l~~~~~~~~~l~~~~~~LkpgG~l~~~~ 187 (297)
T 2o57_A 158 DA-FLHSPDKLKVFQECARVLKPRGVMAITD 187 (297)
T ss_dssp SC-GGGCSCHHHHHHHHHHHEEEEEEEEEEE
T ss_pred ch-hhhcCCHHHHHHHHHHHcCCCeEEEEEE
Confidence 98 9999999999999999999999998874
No 19
>1xtp_A LMAJ004091AAA; SGPP, structural genomics, PSI, protein structure initiative dependent methyltransferase; HET: SAI; 1.94A {Leishmania major} SCOP: c.66.1.42
Probab=99.50 E-value=8e-14 Score=134.75 Aligned_cols=99 Identities=12% Similarity=0.069 Sum_probs=81.8
Q ss_pred HHHHcCCCCCCCeEEEEcCCCCHhHHHHHhcCCCcEEEEecCCC-------------CCcEEeccCCCCCCCCCceeEEE
Q 010086 107 DLISEGYLSQSAKSLCVETQYGQDVFALKEIGVEDSIGIFKKSS-------------KPLVISGEGHRIPFDGNTFDFVF 173 (518)
Q Consensus 107 ~L~~~gll~~~~rvLDVGcGtG~~~~~L~~~g~~~v~gID~s~~-------------~~l~~~~da~~LPf~D~SFD~V~ 173 (518)
.+++.....++.+|||||||+|..+..+.+.+...++|+|+++. ...++.+|..++|+++++||+|+
T Consensus 84 ~~l~~l~~~~~~~vLDiG~G~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~ 163 (254)
T 1xtp_A 84 NFIASLPGHGTSRALDCGAGIGRITKNLLTKLYATTDLLEPVKHMLEEAKRELAGMPVGKFILASMETATLPPNTYDLIV 163 (254)
T ss_dssp HHHHTSTTCCCSEEEEETCTTTHHHHHTHHHHCSEEEEEESCHHHHHHHHHHTTTSSEEEEEESCGGGCCCCSSCEEEEE
T ss_pred HHHHhhcccCCCEEEEECCCcCHHHHHHHHhhcCEEEEEeCCHHHHHHHHHHhccCCceEEEEccHHHCCCCCCCeEEEE
Confidence 34444345678999999999999998888766568999999741 12346889999999999999999
Q ss_pred EcCceeeccC--ChHHHHHHHHhcccCCcEEEEEe
Q 010086 174 VGGARLEKAS--KPLDFASEIVRTLKPEGFAVVHV 206 (518)
Q Consensus 174 s~~~~l~~~~--dp~~~l~Ei~RVLKPGG~lvi~~ 206 (518)
+..+ ++|++ ++..+++++.|+|||||++++..
T Consensus 164 ~~~~-l~~~~~~~~~~~l~~~~~~LkpgG~l~i~~ 197 (254)
T 1xtp_A 164 IQWT-AIYLTDADFVKFFKHCQQALTPNGYIFFKE 197 (254)
T ss_dssp EESC-GGGSCHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred Ecch-hhhCCHHHHHHHHHHHHHhcCCCeEEEEEe
Confidence 9997 99995 47789999999999999999876
No 20
>4e2x_A TCAB9; kijanose, tetronitrose, tetradeoxy sugar, sugar methylation, transferase; HET: SAH TYD; 1.40A {Micromonospora chalcea} PDB: 3ndi_A* 3ndj_A* 4e32_A* 4e33_A* 4e2y_A* 4e31_A* 4e2w_A* 4e2z_A* 4e30_A*
Probab=99.50 E-value=8.9e-15 Score=153.29 Aligned_cols=131 Identities=11% Similarity=0.138 Sum_probs=98.3
Q ss_pred HHHHHHHHHHcCCCCCCCeEEEEcCCCCHhHHHHHhcCCCcEEEEecCCC---------CC----cEEeccCCCCCCCCC
Q 010086 101 YSSVFQDLISEGYLSQSAKSLCVETQYGQDVFALKEIGVEDSIGIFKKSS---------KP----LVISGEGHRIPFDGN 167 (518)
Q Consensus 101 ~~~l~~~L~~~gll~~~~rvLDVGcGtG~~~~~L~~~g~~~v~gID~s~~---------~~----l~~~~da~~LPf~D~ 167 (518)
...+.+.+++...++++.+|||||||+|..+..|++.| .+++|+|+|+. .. .+..++++.+||+++
T Consensus 92 ~~~~~~~l~~~~~~~~~~~VLDiGcG~G~~~~~l~~~g-~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~l~~~~~ 170 (416)
T 4e2x_A 92 FAMLARDFLATELTGPDPFIVEIGCNDGIMLRTIQEAG-VRHLGFEPSSGVAAKAREKGIRVRTDFFEKATADDVRRTEG 170 (416)
T ss_dssp HHHHHHHHHHTTTCSSSCEEEEETCTTTTTHHHHHHTT-CEEEEECCCHHHHHHHHTTTCCEECSCCSHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHhCCCCCCEEEEecCCCCHHHHHHHHcC-CcEEEECCCHHHHHHHHHcCCCcceeeechhhHhhcccCCC
Confidence 34444555555556788999999999999999998887 59999999841 01 122456777889999
Q ss_pred ceeEEEEcCceeeccCChHHHHHHHHhcccCCcEEEEEecCC-----------------CccCchhHhhhcc--CccEEE
Q 010086 168 TFDFVFVGGARLEKASKPLDFASEIVRTLKPEGFAVVHVRAK-----------------DEYSFNSFLDLFN--SCKLVK 228 (518)
Q Consensus 168 SFD~V~s~~~~l~~~~dp~~~l~Ei~RVLKPGG~lvi~~~~~-----------------~~~s~~~~~~lf~--~~~~v~ 228 (518)
+||+|++.++ |+|++++..+++|+.|+|||||++++.+... ..++...+..++. .++++.
T Consensus 171 ~fD~I~~~~v-l~h~~d~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~~ll~~aGf~~~~ 249 (416)
T 4e2x_A 171 PANVIYAANT-LCHIPYVQSVLEGVDALLAPDGVFVFEDPYLGDIVAKTSFDQIFDEHFFLFSATSVQGMAQRCGFELVD 249 (416)
T ss_dssp CEEEEEEESC-GGGCTTHHHHHHHHHHHEEEEEEEEEEEECHHHHHHHTCGGGCSTTCCEECCHHHHHHHHHHTTEEEEE
T ss_pred CEEEEEECCh-HHhcCCHHHHHHHHHHHcCCCeEEEEEeCChHHhhhhcchhhhhhhhhhcCCHHHHHHHHHHcCCEEEE
Confidence 9999999998 9999999999999999999999999976321 0134345555543 467777
Q ss_pred EeccC
Q 010086 229 SRDID 233 (518)
Q Consensus 229 ~~~v~ 233 (518)
+....
T Consensus 250 ~~~~~ 254 (416)
T 4e2x_A 250 VQRLP 254 (416)
T ss_dssp EEEEC
T ss_pred EEEcc
Confidence 66643
No 21
>2gs9_A Hypothetical protein TT1324; methyl transferase, structural genomics, NPPSFA, national PR protein structural and functional analyses; HET: SAH; 2.60A {Thermus thermophilus}
Probab=99.50 E-value=7.7e-14 Score=131.59 Aligned_cols=92 Identities=25% Similarity=0.293 Sum_probs=79.5
Q ss_pred CCCCCeEEEEcCCCCHhHHHHHhcCCCcEEEEecCCC----------CCcEEeccCCCCCCCCCceeEEEEcCceeeccC
Q 010086 114 LSQSAKSLCVETQYGQDVFALKEIGVEDSIGIFKKSS----------KPLVISGEGHRIPFDGNTFDFVFVGGARLEKAS 183 (518)
Q Consensus 114 l~~~~rvLDVGcGtG~~~~~L~~~g~~~v~gID~s~~----------~~l~~~~da~~LPf~D~SFD~V~s~~~~l~~~~ 183 (518)
+.++.+|||||||+|..+..+ +..+++|+|+++. ...++.+|..++|+++++||+|++..+ ++|++
T Consensus 34 ~~~~~~vLdiG~G~G~~~~~l---~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~-l~~~~ 109 (211)
T 2gs9_A 34 LPPGESLLEVGAGTGYWLRRL---PYPQKVGVEPSEAMLAVGRRRAPEATWVRAWGEALPFPGESFDVVLLFTT-LEFVE 109 (211)
T ss_dssp CCCCSEEEEETCTTCHHHHHC---CCSEEEEECCCHHHHHHHHHHCTTSEEECCCTTSCCSCSSCEEEEEEESC-TTTCS
T ss_pred cCCCCeEEEECCCCCHhHHhC---CCCeEEEEeCCHHHHHHHHHhCCCcEEEEcccccCCCCCCcEEEEEEcCh-hhhcC
Confidence 348899999999999988777 5448999999741 234678899999999999999999997 99999
Q ss_pred ChHHHHHHHHhcccCCcEEEEEecCC
Q 010086 184 KPLDFASEIVRTLKPEGFAVVHVRAK 209 (518)
Q Consensus 184 dp~~~l~Ei~RVLKPGG~lvi~~~~~ 209 (518)
++.++++|+.|+|||||.+++.+...
T Consensus 110 ~~~~~l~~~~~~L~pgG~l~i~~~~~ 135 (211)
T 2gs9_A 110 DVERVLLEARRVLRPGGALVVGVLEA 135 (211)
T ss_dssp CHHHHHHHHHHHEEEEEEEEEEEECT
T ss_pred CHHHHHHHHHHHcCCCCEEEEEecCC
Confidence 99999999999999999999986543
No 22
>3l8d_A Methyltransferase; structural genomics, PSI, nysgrc, protein structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Bacillus thuringiensis}
Probab=99.50 E-value=5e-14 Score=135.25 Aligned_cols=93 Identities=25% Similarity=0.427 Sum_probs=82.1
Q ss_pred CCCCCeEEEEcCCCCHhHHHHHhcCCCcEEEEecCCC------------CCcEEeccCCCCCCCCCceeEEEEcCceeec
Q 010086 114 LSQSAKSLCVETQYGQDVFALKEIGVEDSIGIFKKSS------------KPLVISGEGHRIPFDGNTFDFVFVGGARLEK 181 (518)
Q Consensus 114 l~~~~rvLDVGcGtG~~~~~L~~~g~~~v~gID~s~~------------~~l~~~~da~~LPf~D~SFD~V~s~~~~l~~ 181 (518)
++++.+|||||||+|..+..+++.| .+++|+|+++. ...++.+|..++|+++++||+|++..+ ++|
T Consensus 51 ~~~~~~vLDiG~G~G~~~~~l~~~~-~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~-l~~ 128 (242)
T 3l8d_A 51 VKKEAEVLDVGCGDGYGTYKLSRTG-YKAVGVDISEVMIQKGKERGEGPDLSFIKGDLSSLPFENEQFEAIMAINS-LEW 128 (242)
T ss_dssp SCTTCEEEEETCTTSHHHHHHHHTT-CEEEEEESCHHHHHHHHTTTCBTTEEEEECBTTBCSSCTTCEEEEEEESC-TTS
T ss_pred cCCCCeEEEEcCCCCHHHHHHHHcC-CeEEEEECCHHHHHHHHhhcccCCceEEEcchhcCCCCCCCccEEEEcCh-Hhh
Confidence 5688999999999999999998887 59999999741 123568999999999999999999998 999
Q ss_pred cCChHHHHHHHHhcccCCcEEEEEecC
Q 010086 182 ASKPLDFASEIVRTLKPEGFAVVHVRA 208 (518)
Q Consensus 182 ~~dp~~~l~Ei~RVLKPGG~lvi~~~~ 208 (518)
++++..+++++.|+|||||++++.+..
T Consensus 129 ~~~~~~~l~~~~~~L~pgG~l~i~~~~ 155 (242)
T 3l8d_A 129 TEEPLRALNEIKRVLKSDGYACIAILG 155 (242)
T ss_dssp SSCHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred ccCHHHHHHHHHHHhCCCeEEEEEEcC
Confidence 999999999999999999999998643
No 23
>3e23_A Uncharacterized protein RPA2492; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAM; 1.60A {Rhodopseudomonas palustris}
Probab=99.50 E-value=6.9e-14 Score=132.09 Aligned_cols=118 Identities=19% Similarity=0.142 Sum_probs=94.7
Q ss_pred CCCCCeEEEEcCCCCHhHHHHHhcCCCcEEEEecCCC---------CCcEEeccCCCCCCCCCceeEEEEcCceeeccC-
Q 010086 114 LSQSAKSLCVETQYGQDVFALKEIGVEDSIGIFKKSS---------KPLVISGEGHRIPFDGNTFDFVFVGGARLEKAS- 183 (518)
Q Consensus 114 l~~~~rvLDVGcGtG~~~~~L~~~g~~~v~gID~s~~---------~~l~~~~da~~LPf~D~SFD~V~s~~~~l~~~~- 183 (518)
++++.+|||||||+|..+..+++.| .+++|+|+++. ...+..++...+| ++++||+|++..+ ++|+.
T Consensus 41 ~~~~~~vLDiGcG~G~~~~~l~~~~-~~v~~vD~s~~~~~~a~~~~~~~~~~~d~~~~~-~~~~fD~v~~~~~-l~~~~~ 117 (211)
T 3e23_A 41 LPAGAKILELGCGAGYQAEAMLAAG-FDVDATDGSPELAAEASRRLGRPVRTMLFHQLD-AIDAYDAVWAHAC-LLHVPR 117 (211)
T ss_dssp SCTTCEEEESSCTTSHHHHHHHHTT-CEEEEEESCHHHHHHHHHHHTSCCEECCGGGCC-CCSCEEEEEECSC-GGGSCH
T ss_pred cCCCCcEEEECCCCCHHHHHHHHcC-CeEEEECCCHHHHHHHHHhcCCceEEeeeccCC-CCCcEEEEEecCc-hhhcCH
Confidence 5678999999999999999998876 59999999752 2345678999999 8999999999998 99998
Q ss_pred -ChHHHHHHHHhcccCCcEEEEEecCCCc------------cCchhHhhhcc--C-ccEEEEeccCC
Q 010086 184 -KPLDFASEIVRTLKPEGFAVVHVRAKDE------------YSFNSFLDLFN--S-CKLVKSRDIDG 234 (518)
Q Consensus 184 -dp~~~l~Ei~RVLKPGG~lvi~~~~~~~------------~s~~~~~~lf~--~-~~~v~~~~v~~ 234 (518)
++..+++++.|+|||||++++.+..... ++...+..++. . |+++.+....+
T Consensus 118 ~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aG~f~~~~~~~~~~ 184 (211)
T 3e23_A 118 DELADVLKLIWRALKPGGLFYASYKSGEGEGRDKLARYYNYPSEEWLRARYAEAGTWASVAVESSEG 184 (211)
T ss_dssp HHHHHHHHHHHHHEEEEEEEEEEEECCSSCEECTTSCEECCCCHHHHHHHHHHHCCCSEEEEEEEEE
T ss_pred HHHHHHHHHHHHhcCCCcEEEEEEcCCCcccccccchhccCCCHHHHHHHHHhCCCcEEEEEEeccC
Confidence 6778999999999999999998643321 34455666665 4 88887765543
No 24
>3dlc_A Putative S-adenosyl-L-methionine-dependent methyltransferase; structural genomics, joint center for structural genomics; HET: MSE SAM; 1.15A {Methanococcus maripaludis}
Probab=99.50 E-value=5.2e-14 Score=132.13 Aligned_cols=103 Identities=17% Similarity=0.162 Sum_probs=83.7
Q ss_pred HHHHHHHHHcCCCCCCCeEEEEcCCCCHhHHHHHhcCCCcEEEEecCCC----------------CCcEEeccCCCCCCC
Q 010086 102 SSVFQDLISEGYLSQSAKSLCVETQYGQDVFALKEIGVEDSIGIFKKSS----------------KPLVISGEGHRIPFD 165 (518)
Q Consensus 102 ~~l~~~L~~~gll~~~~rvLDVGcGtG~~~~~L~~~g~~~v~gID~s~~----------------~~l~~~~da~~LPf~ 165 (518)
..+.+.+.+...++++ +|||||||+|..+..+.+....+++|+|+++. ...++.+|..++|++
T Consensus 30 ~~~~~~~~~~~~~~~~-~vLdiG~G~G~~~~~l~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~ 108 (219)
T 3dlc_A 30 PIIAENIINRFGITAG-TCIDIGSGPGALSIALAKQSDFSIRALDFSKHMNEIALKNIADANLNDRIQIVQGDVHNIPIE 108 (219)
T ss_dssp HHHHHHHHHHHCCCEE-EEEEETCTTSHHHHHHHHHSEEEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECBTTBCSSC
T ss_pred HHHHHHHHHhcCCCCC-EEEEECCCCCHHHHHHHHcCCCeEEEEECCHHHHHHHHHHHHhccccCceEEEEcCHHHCCCC
Confidence 3344444443334555 99999999999998888763369999999741 123578999999999
Q ss_pred CCceeEEEEcCceeeccCChHHHHHHHHhcccCCcEEEEEe
Q 010086 166 GNTFDFVFVGGARLEKASKPLDFASEIVRTLKPEGFAVVHV 206 (518)
Q Consensus 166 D~SFD~V~s~~~~l~~~~dp~~~l~Ei~RVLKPGG~lvi~~ 206 (518)
+++||+|++..+ ++|+.++..+++++.|+|||||++++..
T Consensus 109 ~~~~D~v~~~~~-l~~~~~~~~~l~~~~~~L~pgG~l~~~~ 148 (219)
T 3dlc_A 109 DNYADLIVSRGS-VFFWEDVATAFREIYRILKSGGKTYIGG 148 (219)
T ss_dssp TTCEEEEEEESC-GGGCSCHHHHHHHHHHHEEEEEEEEEEE
T ss_pred cccccEEEECch-HhhccCHHHHHHHHHHhCCCCCEEEEEe
Confidence 999999999997 9999999999999999999999998874
No 25
>2avn_A Ubiquinone/menaquinone biosynthesis methyltransfe related protein; ubiquinone/menaquinone biosynthesis methyltransferase-relate protein; HET: SAI; 2.35A {Thermotoga maritima} SCOP: c.66.1.41
Probab=99.49 E-value=1.4e-13 Score=134.80 Aligned_cols=117 Identities=21% Similarity=0.313 Sum_probs=90.1
Q ss_pred chhhccCChhHHHHHhhHHHHHHHHHHcCCCCCCCeEEEEcCCCCHhHHHHHhcCCCcEEEEecCCC---------CCcE
Q 010086 84 SRRDMYTSKEWIKAVNFYSSVFQDLISEGYLSQSAKSLCVETQYGQDVFALKEIGVEDSIGIFKKSS---------KPLV 154 (518)
Q Consensus 84 ~~~~~w~s~~wr~~v~~~~~l~~~L~~~gll~~~~rvLDVGcGtG~~~~~L~~~g~~~v~gID~s~~---------~~l~ 154 (518)
.|........|+...+.+..++..+ ++++.+|||||||+|..+..+++.| .+++|+|+++. ...+
T Consensus 27 ~Yd~~~~~~~~~~~~~~~~~~l~~~-----~~~~~~vLDiGcG~G~~~~~l~~~~-~~v~gvD~s~~~l~~a~~~~~~~~ 100 (260)
T 2avn_A 27 AYDSMYETPKWKLYHRLIGSFLEEY-----LKNPCRVLDLGGGTGKWSLFLQERG-FEVVLVDPSKEMLEVAREKGVKNV 100 (260)
T ss_dssp HHGGGGCSHHHHHHHHHHHHHHHHH-----CCSCCEEEEETCTTCHHHHHHHTTT-CEEEEEESCHHHHHHHHHHTCSCE
T ss_pred HHHHhccccchhHHHHHHHHHHHHh-----cCCCCeEEEeCCCcCHHHHHHHHcC-CeEEEEeCCHHHHHHHHhhcCCCE
Confidence 4556665666644333333333322 3478899999999999999998876 58999999741 1237
Q ss_pred EeccCCCCCCCCCceeEEEEcCceeecc-CChHHHHHHHHhcccCCcEEEEEec
Q 010086 155 ISGEGHRIPFDGNTFDFVFVGGARLEKA-SKPLDFASEIVRTLKPEGFAVVHVR 207 (518)
Q Consensus 155 ~~~da~~LPf~D~SFD~V~s~~~~l~~~-~dp~~~l~Ei~RVLKPGG~lvi~~~ 207 (518)
+.+|+.++|+++++||+|++... +.|+ .++..+++|+.|+|||||++++.+.
T Consensus 101 ~~~d~~~~~~~~~~fD~v~~~~~-~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 153 (260)
T 2avn_A 101 VEAKAEDLPFPSGAFEAVLALGD-VLSYVENKDKAFSEIRRVLVPDGLLIATVD 153 (260)
T ss_dssp EECCTTSCCSCTTCEEEEEECSS-HHHHCSCHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred EECcHHHCCCCCCCEEEEEEcch-hhhccccHHHHHHHHHHHcCCCeEEEEEeC
Confidence 78999999999999999999875 5554 7899999999999999999998764
No 26
>3hnr_A Probable methyltransferase BT9727_4108; structural genomics, PSI-2, protein structure initiative; 2.80A {Bacillus thuringiensis serovarkonkukian}
Probab=99.49 E-value=4.7e-14 Score=133.67 Aligned_cols=106 Identities=13% Similarity=0.124 Sum_probs=86.4
Q ss_pred HHHHHhhHHHHHHHHHHcCCCCCCCeEEEEcCCCCHhHHHHHhcCCCcEEEEecCCC-----------CCcEEeccCCCC
Q 010086 94 WIKAVNFYSSVFQDLISEGYLSQSAKSLCVETQYGQDVFALKEIGVEDSIGIFKKSS-----------KPLVISGEGHRI 162 (518)
Q Consensus 94 wr~~v~~~~~l~~~L~~~gll~~~~rvLDVGcGtG~~~~~L~~~g~~~v~gID~s~~-----------~~l~~~~da~~L 162 (518)
|+.....+..+++.+. ..++.+|||||||+|..+..+.+.+ .+++|+|+++. ...++.+|+.++
T Consensus 27 ~~~~~~~~~~~l~~~~----~~~~~~vLDiGcG~G~~~~~l~~~~-~~v~~vD~s~~~~~~a~~~~~~~~~~~~~d~~~~ 101 (220)
T 3hnr_A 27 YKEVFAHYEDILEDVV----NKSFGNVLEFGVGTGNLTNKLLLAG-RTVYGIEPSREMRMIAKEKLPKEFSITEGDFLSF 101 (220)
T ss_dssp TTTTTTTHHHHHHHHH----HTCCSEEEEECCTTSHHHHHHHHTT-CEEEEECSCHHHHHHHHHHSCTTCCEESCCSSSC
T ss_pred HHHHHHHHHHHHHHhh----ccCCCeEEEeCCCCCHHHHHHHhCC-CeEEEEeCCHHHHHHHHHhCCCceEEEeCChhhc
Confidence 3333334455555443 2478899999999999999998876 69999999741 245678999999
Q ss_pred CCCCCceeEEEEcCceeeccCChHH--HHHHHHhcccCCcEEEEEe
Q 010086 163 PFDGNTFDFVFVGGARLEKASKPLD--FASEIVRTLKPEGFAVVHV 206 (518)
Q Consensus 163 Pf~D~SFD~V~s~~~~l~~~~dp~~--~l~Ei~RVLKPGG~lvi~~ 206 (518)
|++ ++||+|++..+ ++|++++.. +++++.|+|||||.+++..
T Consensus 102 ~~~-~~fD~v~~~~~-l~~~~~~~~~~~l~~~~~~LkpgG~l~i~~ 145 (220)
T 3hnr_A 102 EVP-TSIDTIVSTYA-FHHLTDDEKNVAIAKYSQLLNKGGKIVFAD 145 (220)
T ss_dssp CCC-SCCSEEEEESC-GGGSCHHHHHHHHHHHHHHSCTTCEEEEEE
T ss_pred CCC-CCeEEEEECcc-hhcCChHHHHHHHHHHHHhcCCCCEEEEEe
Confidence 999 99999999998 999999877 9999999999999999874
No 27
>4gek_A TRNA (CMO5U34)-methyltransferase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, rossmann fold; HET: GEK; 1.50A {Escherichia coli} PDB: 1im8_A*
Probab=99.49 E-value=6.3e-14 Score=139.28 Aligned_cols=91 Identities=15% Similarity=0.196 Sum_probs=74.6
Q ss_pred CCCCCCeEEEEcCCCCHhHHHHHhc-C--CCcEEEEecCCC----------------CCcEEeccCCCCCCCCCceeEEE
Q 010086 113 YLSQSAKSLCVETQYGQDVFALKEI-G--VEDSIGIFKKSS----------------KPLVISGEGHRIPFDGNTFDFVF 173 (518)
Q Consensus 113 ll~~~~rvLDVGcGtG~~~~~L~~~-g--~~~v~gID~s~~----------------~~l~~~~da~~LPf~D~SFD~V~ 173 (518)
.++++.+|||||||+|..+..|++. + ..+|+|||+|+. ...++++|+.++|++ .||+|+
T Consensus 67 ~~~~~~~vLDlGcGtG~~~~~la~~~~~~~~~v~gvD~s~~ml~~A~~~~~~~~~~~~v~~~~~D~~~~~~~--~~d~v~ 144 (261)
T 4gek_A 67 FVQPGTQVYDLGCSLGAATLSVRRNIHHDNCKIIAIDNSPAMIERCRRHIDAYKAPTPVDVIEGDIRDIAIE--NASMVV 144 (261)
T ss_dssp HCCTTCEEEEETCTTTHHHHHHHHTCCSSSCEEEEEESCHHHHHHHHHHHHTSCCSSCEEEEESCTTTCCCC--SEEEEE
T ss_pred hCCCCCEEEEEeCCCCHHHHHHHHhcCCCCCEEEEEECCHHHHHHHHHHHHhhccCceEEEeeccccccccc--ccccce
Confidence 4789999999999999999888764 1 248999999841 123568999999885 499999
Q ss_pred EcCceeeccCChH--HHHHHHHhcccCCcEEEEEe
Q 010086 174 VGGARLEKASKPL--DFASEIVRTLKPEGFAVVHV 206 (518)
Q Consensus 174 s~~~~l~~~~dp~--~~l~Ei~RVLKPGG~lvi~~ 206 (518)
+..+ ++|++++. .+++|++|+|||||++++..
T Consensus 145 ~~~~-l~~~~~~~~~~~l~~i~~~LkpGG~lii~e 178 (261)
T 4gek_A 145 LNFT-LQFLEPSERQALLDKIYQGLNPGGALVLSE 178 (261)
T ss_dssp EESC-GGGSCHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred eeee-eeecCchhHhHHHHHHHHHcCCCcEEEEEe
Confidence 9987 99987554 68999999999999998863
No 28
>3f4k_A Putative methyltransferase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacteroides thetaiotaomicron} PDB: 3t0i_A* 3svz_A* 3sxj_A*
Probab=99.48 E-value=1.5e-13 Score=133.17 Aligned_cols=92 Identities=22% Similarity=0.224 Sum_probs=80.3
Q ss_pred CCCCCCeEEEEcCCCCHhHHHHHhcCCCcEEEEecCCC--------------C--CcEEeccCCCCCCCCCceeEEEEcC
Q 010086 113 YLSQSAKSLCVETQYGQDVFALKEIGVEDSIGIFKKSS--------------K--PLVISGEGHRIPFDGNTFDFVFVGG 176 (518)
Q Consensus 113 ll~~~~rvLDVGcGtG~~~~~L~~~g~~~v~gID~s~~--------------~--~l~~~~da~~LPf~D~SFD~V~s~~ 176 (518)
.++++.+|||||||+|..+..+++.+..+++|+|+++. . ..++.+|+.++|+++++||+|++..
T Consensus 43 ~~~~~~~vLDiG~G~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~ 122 (257)
T 3f4k_A 43 ELTDDAKIADIGCGTGGQTLFLADYVKGQITGIDLFPDFIEIFNENAVKANCADRVKGITGSMDNLPFQNEELDLIWSEG 122 (257)
T ss_dssp CCCTTCEEEEETCTTSHHHHHHHHHCCSEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCSSCTTCEEEEEEES
T ss_pred cCCCCCeEEEeCCCCCHHHHHHHHhCCCeEEEEECCHHHHHHHHHHHHHcCCCCceEEEECChhhCCCCCCCEEEEEecC
Confidence 35778899999999999998888875459999999841 1 3357899999999999999999999
Q ss_pred ceeeccCChHHHHHHHHhcccCCcEEEEEe
Q 010086 177 ARLEKASKPLDFASEIVRTLKPEGFAVVHV 206 (518)
Q Consensus 177 ~~l~~~~dp~~~l~Ei~RVLKPGG~lvi~~ 206 (518)
+ ++|+ ++..+++++.|+|||||++++..
T Consensus 123 ~-l~~~-~~~~~l~~~~~~L~pgG~l~~~~ 150 (257)
T 3f4k_A 123 A-IYNI-GFERGMNEWSKYLKKGGFIAVSE 150 (257)
T ss_dssp C-SCCC-CHHHHHHHHHTTEEEEEEEEEEE
T ss_pred h-Hhhc-CHHHHHHHHHHHcCCCcEEEEEE
Confidence 8 9998 79999999999999999998874
No 29
>2xvm_A Tellurite resistance protein TEHB; antibiotic resistance, transferase; HET: SAH; 1.48A {Escherichia coli} PDB: 2xva_A* 4dq0_A* 2i6g_A*
Probab=99.48 E-value=2.1e-13 Score=126.49 Aligned_cols=115 Identities=16% Similarity=0.207 Sum_probs=92.1
Q ss_pred CCCCeEEEEcCCCCHhHHHHHhcCCCcEEEEecCCC---------------CCcEEeccCCCCCCCCCceeEEEEcCcee
Q 010086 115 SQSAKSLCVETQYGQDVFALKEIGVEDSIGIFKKSS---------------KPLVISGEGHRIPFDGNTFDFVFVGGARL 179 (518)
Q Consensus 115 ~~~~rvLDVGcGtG~~~~~L~~~g~~~v~gID~s~~---------------~~l~~~~da~~LPf~D~SFD~V~s~~~~l 179 (518)
.++.+|||+|||+|..+..+++.| .+++|+|+++. ...++.+|..++|+ +++||+|++..+ +
T Consensus 31 ~~~~~vLdiG~G~G~~~~~l~~~~-~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~~-~~~~D~v~~~~~-l 107 (199)
T 2xvm_A 31 VKPGKTLDLGCGNGRNSLYLAANG-YDVDAWDKNAMSIANVERIKSIENLDNLHTRVVDLNNLTF-DRQYDFILSTVV-L 107 (199)
T ss_dssp SCSCEEEEETCTTSHHHHHHHHTT-CEEEEEESCHHHHHHHHHHHHHHTCTTEEEEECCGGGCCC-CCCEEEEEEESC-G
T ss_pred cCCCeEEEEcCCCCHHHHHHHHCC-CeEEEEECCHHHHHHHHHHHHhCCCCCcEEEEcchhhCCC-CCCceEEEEcch-h
Confidence 467899999999999998888876 59999999741 22356889999999 899999999997 9
Q ss_pred eccC--ChHHHHHHHHhcccCCcEEEEEec-C-CC---------ccCchhHhhhccCccEEEEecc
Q 010086 180 EKAS--KPLDFASEIVRTLKPEGFAVVHVR-A-KD---------EYSFNSFLDLFNSCKLVKSRDI 232 (518)
Q Consensus 180 ~~~~--dp~~~l~Ei~RVLKPGG~lvi~~~-~-~~---------~~s~~~~~~lf~~~~~v~~~~v 232 (518)
+|++ ++..+++++.|+|||||.+++... . .+ .++...+.++|..++++.....
T Consensus 108 ~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~f~~~~~~~~ 173 (199)
T 2xvm_A 108 MFLEAKTIPGLIANMQRCTKPGGYNLIVAAMDTADYPCTVGFPFAFKEGELRRYYEGWERVKYNED 173 (199)
T ss_dssp GGSCGGGHHHHHHHHHHTEEEEEEEEEEEEBCCSSSCCCSCCSCCBCTTHHHHHTTTSEEEEEECC
T ss_pred hhCCHHHHHHHHHHHHHhcCCCeEEEEEEeeccCCcCCCCCCCCccCHHHHHHHhcCCeEEEeccc
Confidence 9987 678899999999999999776532 1 11 2355667788888888887653
No 30
>3kkz_A Uncharacterized protein Q5LES9; putative methyltransferase, BFR250, NESG, structural genomics, PSI-2; HET: SAM; 1.68A {Bacteroides fragilis nctc 9343} PDB: 3e7p_A 3t7s_A* 3t7r_A* 3t7t_A*
Probab=99.48 E-value=1.9e-13 Score=134.06 Aligned_cols=91 Identities=19% Similarity=0.191 Sum_probs=80.5
Q ss_pred CCCCCeEEEEcCCCCHhHHHHHhcCCCcEEEEecCCC---------------C-CcEEeccCCCCCCCCCceeEEEEcCc
Q 010086 114 LSQSAKSLCVETQYGQDVFALKEIGVEDSIGIFKKSS---------------K-PLVISGEGHRIPFDGNTFDFVFVGGA 177 (518)
Q Consensus 114 l~~~~rvLDVGcGtG~~~~~L~~~g~~~v~gID~s~~---------------~-~l~~~~da~~LPf~D~SFD~V~s~~~ 177 (518)
++++.+|||||||+|..+..+++.+..+++|+|+++. + ..++.+|..++|+++++||+|++..+
T Consensus 44 ~~~~~~vLDiGcG~G~~~~~la~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~i~~~~~ 123 (267)
T 3kkz_A 44 LTEKSLIADIGCGTGGQTMVLAGHVTGQVTGLDFLSGFIDIFNRNARQSGLQNRVTGIVGSMDDLPFRNEELDLIWSEGA 123 (267)
T ss_dssp CCTTCEEEEETCTTCHHHHHHHTTCSSEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCCCCTTCEEEEEESSC
T ss_pred CCCCCEEEEeCCCCCHHHHHHHhccCCEEEEEeCCHHHHHHHHHHHHHcCCCcCcEEEEcChhhCCCCCCCEEEEEEcCC
Confidence 5788999999999999999988876569999999842 1 33578999999999999999999998
Q ss_pred eeeccCChHHHHHHHHhcccCCcEEEEEe
Q 010086 178 RLEKASKPLDFASEIVRTLKPEGFAVVHV 206 (518)
Q Consensus 178 ~l~~~~dp~~~l~Ei~RVLKPGG~lvi~~ 206 (518)
++|+ ++..+++++.|+|||||++++..
T Consensus 124 -~~~~-~~~~~l~~~~~~LkpgG~l~~~~ 150 (267)
T 3kkz_A 124 -IYNI-GFERGLNEWRKYLKKGGYLAVSE 150 (267)
T ss_dssp -GGGT-CHHHHHHHHGGGEEEEEEEEEEE
T ss_pred -ceec-CHHHHHHHHHHHcCCCCEEEEEE
Confidence 9998 89999999999999999998874
No 31
>3ege_A Putative methyltransferase from antibiotic biosyn pathway; YP_324569.1, putative methyltransferase from antibiotic BIOS pathway; 2.40A {Anabaena variabilis atcc 29413}
Probab=99.47 E-value=1.5e-13 Score=134.93 Aligned_cols=91 Identities=15% Similarity=0.079 Sum_probs=79.5
Q ss_pred CCCCCeEEEEcCCCCHhHHHHHhcCCCcEEEEecCCC---------CCcEEeccCCCCCCCCCceeEEEEcCceeeccCC
Q 010086 114 LSQSAKSLCVETQYGQDVFALKEIGVEDSIGIFKKSS---------KPLVISGEGHRIPFDGNTFDFVFVGGARLEKASK 184 (518)
Q Consensus 114 l~~~~rvLDVGcGtG~~~~~L~~~g~~~v~gID~s~~---------~~l~~~~da~~LPf~D~SFD~V~s~~~~l~~~~d 184 (518)
+.++.+|||||||+|..+..+++.+ .+|+|+|+|+. ...++.+|++++||++++||+|++..+ ++|+.+
T Consensus 32 ~~~~~~vLDiGcG~G~~~~~l~~~~-~~v~gvD~s~~~~~~a~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~-l~~~~~ 109 (261)
T 3ege_A 32 LPKGSVIADIGAGTGGYSVALANQG-LFVYAVEPSIVMRQQAVVHPQVEWFTGYAENLALPDKSVDGVISILA-IHHFSH 109 (261)
T ss_dssp CCTTCEEEEETCTTSHHHHHHHTTT-CEEEEECSCHHHHHSSCCCTTEEEECCCTTSCCSCTTCBSEEEEESC-GGGCSS
T ss_pred CCCCCEEEEEcCcccHHHHHHHhCC-CEEEEEeCCHHHHHHHHhccCCEEEECchhhCCCCCCCEeEEEEcch-HhhccC
Confidence 5688999999999999999998866 69999999841 123568999999999999999999998 999999
Q ss_pred hHHHHHHHHhcccCCcEEEEEec
Q 010086 185 PLDFASEIVRTLKPEGFAVVHVR 207 (518)
Q Consensus 185 p~~~l~Ei~RVLKPGG~lvi~~~ 207 (518)
+..+++|+.|+|| ||.+++...
T Consensus 110 ~~~~l~~~~~~Lk-gG~~~~~~~ 131 (261)
T 3ege_A 110 LEKSFQEMQRIIR-DGTIVLLTF 131 (261)
T ss_dssp HHHHHHHHHHHBC-SSCEEEEEE
T ss_pred HHHHHHHHHHHhC-CcEEEEEEc
Confidence 9999999999999 997776643
No 32
>3mgg_A Methyltransferase; NYSGXRC, PSI-II, protein structure initiative, structural genomics, NEW YORK SGX research center for structural genomics; 1.86A {Methanosarcina mazei}
Probab=99.47 E-value=9.1e-14 Score=136.64 Aligned_cols=96 Identities=21% Similarity=0.272 Sum_probs=82.7
Q ss_pred HcCCCCCCCeEEEEcCCCCHhHHHHHhcC-CCcEEEEecCCC---------------CCcEEeccCCCCCCCCCceeEEE
Q 010086 110 SEGYLSQSAKSLCVETQYGQDVFALKEIG-VEDSIGIFKKSS---------------KPLVISGEGHRIPFDGNTFDFVF 173 (518)
Q Consensus 110 ~~gll~~~~rvLDVGcGtG~~~~~L~~~g-~~~v~gID~s~~---------------~~l~~~~da~~LPf~D~SFD~V~ 173 (518)
....++++.+|||||||+|..+..+.+.+ ..+++|+|+++. ...++.+|..++|+++++||+|+
T Consensus 31 ~~~~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~ 110 (276)
T 3mgg_A 31 HDTVYPPGAKVLEAGCGIGAQTVILAKNNPDAEITSIDISPESLEKARENTEKNGIKNVKFLQANIFSLPFEDSSFDHIF 110 (276)
T ss_dssp TTCCCCTTCEEEETTCTTSHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCGGGCCSCTTCEEEEE
T ss_pred hcccCCCCCeEEEecCCCCHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEcccccCCCCCCCeeEEE
Confidence 34456789999999999999998888763 369999999741 12356889999999999999999
Q ss_pred EcCceeeccCChHHHHHHHHhcccCCcEEEEEe
Q 010086 174 VGGARLEKASKPLDFASEIVRTLKPEGFAVVHV 206 (518)
Q Consensus 174 s~~~~l~~~~dp~~~l~Ei~RVLKPGG~lvi~~ 206 (518)
+..+ ++|++++..+++++.|+|||||++++..
T Consensus 111 ~~~~-l~~~~~~~~~l~~~~~~L~pgG~l~~~~ 142 (276)
T 3mgg_A 111 VCFV-LEHLQSPEEALKSLKKVLKPGGTITVIE 142 (276)
T ss_dssp EESC-GGGCSCHHHHHHHHHHHEEEEEEEEEEE
T ss_pred Eech-hhhcCCHHHHHHHHHHHcCCCcEEEEEE
Confidence 9998 9999999999999999999999998875
No 33
>2gb4_A Thiopurine S-methyltransferase; 18204406, thiopurine methyltransferase, structural genomics, PSI, protein structure initiative; HET: SAH; 1.25A {Mus musculus} PDB: 3bgi_A* 3bgd_A* 2bzg_A* 2h11_A*
Probab=99.47 E-value=1.7e-13 Score=135.41 Aligned_cols=118 Identities=14% Similarity=0.148 Sum_probs=89.4
Q ss_pred CCCCCeEEEEcCCCCHhHHHHHhcCCCcEEEEecCC---------CC-----------------------CcEEeccCCC
Q 010086 114 LSQSAKSLCVETQYGQDVFALKEIGVEDSIGIFKKS---------SK-----------------------PLVISGEGHR 161 (518)
Q Consensus 114 l~~~~rvLDVGcGtG~~~~~L~~~g~~~v~gID~s~---------~~-----------------------~l~~~~da~~ 161 (518)
++++.+|||+|||+|..+..|++.| .+|+|||+|+ .. ..++++|+.+
T Consensus 66 ~~~~~~vLD~GCG~G~~~~~La~~G-~~V~gvD~S~~~i~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~D~~~ 144 (252)
T 2gb4_A 66 GQSGLRVFFPLCGKAIEMKWFADRG-HTVVGVEISEIGIREFFAEQNLSYTEEPLAEIAGAKVFKSSSGSISLYCCSIFD 144 (252)
T ss_dssp TCCSCEEEETTCTTCTHHHHHHHTT-CEEEEECSCHHHHHHHHHHTTCCEEEEECTTSTTCEEEEETTSSEEEEESCTTT
T ss_pred CCCCCeEEEeCCCCcHHHHHHHHCC-CeEEEEECCHHHHHHHHHhcccccccccccccccccccccCCCceEEEECcccc
Confidence 3578899999999999999999988 4999999983 11 1246899999
Q ss_pred CCCCC-CceeEEEEcCceeeccCCh--HHHHHHHHhcccCCcEEEEE-ecCC------C--ccCchhHhhhcc-CccEEE
Q 010086 162 IPFDG-NTFDFVFVGGARLEKASKP--LDFASEIVRTLKPEGFAVVH-VRAK------D--EYSFNSFLDLFN-SCKLVK 228 (518)
Q Consensus 162 LPf~D-~SFD~V~s~~~~l~~~~dp--~~~l~Ei~RVLKPGG~lvi~-~~~~------~--~~s~~~~~~lf~-~~~~v~ 228 (518)
+|+++ ++||+|++..+ |+|++.+ ..+++++.|+|||||++++. +... . .++...+..+|. .|+++.
T Consensus 145 l~~~~~~~FD~V~~~~~-l~~l~~~~~~~~l~~~~~~LkpGG~l~l~~~~~~~~~~~g~~~~~~~~el~~~l~~~f~v~~ 223 (252)
T 2gb4_A 145 LPRANIGKFDRIWDRGA-LVAINPGDHDRYADIILSLLRKEFQYLVAVLSYDPTKHAGPPFYVPSAELKRLFGTKCSMQC 223 (252)
T ss_dssp GGGGCCCCEEEEEESSS-TTTSCGGGHHHHHHHHHHTEEEEEEEEEEEEECCTTSCCCSSCCCCHHHHHHHHTTTEEEEE
T ss_pred CCcccCCCEEEEEEhhh-hhhCCHHHHHHHHHHHHHHcCCCeEEEEEEEecCCccCCCCCCCCCHHHHHHHhhCCeEEEE
Confidence 99875 89999999887 8888643 46899999999999998643 3211 1 134455666765 477776
Q ss_pred EeccC
Q 010086 229 SRDID 233 (518)
Q Consensus 229 ~~~v~ 233 (518)
....+
T Consensus 224 ~~~~~ 228 (252)
T 2gb4_A 224 LEEVD 228 (252)
T ss_dssp EEEEE
T ss_pred Eeccc
Confidence 66544
No 34
>3dli_A Methyltransferase; PSI-II, NYSGXRC, structural genomics, protein structure initiative; 2.46A {Archaeoglobus fulgidus}
Probab=99.46 E-value=5.2e-14 Score=135.96 Aligned_cols=94 Identities=18% Similarity=0.217 Sum_probs=80.1
Q ss_pred CCCCCCeEEEEcCCCCHhHHHHHhcCCCcEEEEecCCC-------CCcEEeccCCCC--CCCCCceeEEEEcCceeeccC
Q 010086 113 YLSQSAKSLCVETQYGQDVFALKEIGVEDSIGIFKKSS-------KPLVISGEGHRI--PFDGNTFDFVFVGGARLEKAS 183 (518)
Q Consensus 113 ll~~~~rvLDVGcGtG~~~~~L~~~g~~~v~gID~s~~-------~~l~~~~da~~L--Pf~D~SFD~V~s~~~~l~~~~ 183 (518)
.++++.+|||||||+|..+..+++.| .+++|+|+++. ...++.+|..++ ||++++||+|+|..+ ++|+.
T Consensus 38 ~~~~~~~vLDiGcG~G~~~~~l~~~~-~~v~gvD~s~~~~~~a~~~~~~~~~d~~~~~~~~~~~~fD~i~~~~~-l~~~~ 115 (240)
T 3dli_A 38 YFKGCRRVLDIGCGRGEFLELCKEEG-IESIGVDINEDMIKFCEGKFNVVKSDAIEYLKSLPDKYLDGVMISHF-VEHLD 115 (240)
T ss_dssp GTTTCSCEEEETCTTTHHHHHHHHHT-CCEEEECSCHHHHHHHHTTSEEECSCHHHHHHTSCTTCBSEEEEESC-GGGSC
T ss_pred hhcCCCeEEEEeCCCCHHHHHHHhCC-CcEEEEECCHHHHHHHHhhcceeeccHHHHhhhcCCCCeeEEEECCc-hhhCC
Confidence 35678999999999999999888877 58999999842 134567777775 899999999999998 99999
Q ss_pred Ch--HHHHHHHHhcccCCcEEEEEecC
Q 010086 184 KP--LDFASEIVRTLKPEGFAVVHVRA 208 (518)
Q Consensus 184 dp--~~~l~Ei~RVLKPGG~lvi~~~~ 208 (518)
++ ..+++++.|+|||||++++.+..
T Consensus 116 ~~~~~~~l~~~~~~LkpgG~l~~~~~~ 142 (240)
T 3dli_A 116 PERLFELLSLCYSKMKYSSYIVIESPN 142 (240)
T ss_dssp GGGHHHHHHHHHHHBCTTCCEEEEEEC
T ss_pred cHHHHHHHHHHHHHcCCCcEEEEEeCC
Confidence 66 89999999999999999998654
No 35
>3sm3_A SAM-dependent methyltransferases; NESG, structural genomics, PSI-biology, protein structure in northeast structural genomics; 2.20A {Methanosarcina mazei}
Probab=99.46 E-value=3.3e-13 Score=128.22 Aligned_cols=91 Identities=21% Similarity=0.310 Sum_probs=79.9
Q ss_pred CCCCCeEEEEcCCCCHhHHHHHhcCCCcEEEEecCCC-----------C---------CcEEeccCCCCCCCCCceeEEE
Q 010086 114 LSQSAKSLCVETQYGQDVFALKEIGVEDSIGIFKKSS-----------K---------PLVISGEGHRIPFDGNTFDFVF 173 (518)
Q Consensus 114 l~~~~rvLDVGcGtG~~~~~L~~~g~~~v~gID~s~~-----------~---------~l~~~~da~~LPf~D~SFD~V~ 173 (518)
++++.+|||||||+|..+..+++.| .+++|+|+++. . ..+..+|...+|+++++||+|+
T Consensus 28 ~~~~~~vLdiG~G~G~~~~~l~~~~-~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~ 106 (235)
T 3sm3_A 28 LQEDDEILDIGCGSGKISLELASKG-YSVTGIDINSEAIRLAETAARSPGLNQKTGGKAEFKVENASSLSFHDSSFDFAV 106 (235)
T ss_dssp CCTTCEEEEETCTTSHHHHHHHHTT-CEEEEEESCHHHHHHHHHHTTCCSCCSSSSCEEEEEECCTTSCCSCTTCEEEEE
T ss_pred CCCCCeEEEECCCCCHHHHHHHhCC-CeEEEEECCHHHHHHHHHHHHhcCCccccCcceEEEEecccccCCCCCceeEEE
Confidence 5688999999999999999888886 59999999741 1 1356889999999999999999
Q ss_pred EcCceeeccCChH---HHHHHHHhcccCCcEEEEEe
Q 010086 174 VGGARLEKASKPL---DFASEIVRTLKPEGFAVVHV 206 (518)
Q Consensus 174 s~~~~l~~~~dp~---~~l~Ei~RVLKPGG~lvi~~ 206 (518)
+..+ ++|++++. .+++++.|+|||||++++..
T Consensus 107 ~~~~-l~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~ 141 (235)
T 3sm3_A 107 MQAF-LTSVPDPKERSRIIKEVFRVLKPGAYLYLVE 141 (235)
T ss_dssp EESC-GGGCCCHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred Ecch-hhcCCCHHHHHHHHHHHHHHcCCCeEEEEEE
Confidence 9997 99999998 89999999999999998874
No 36
>3g5t_A Trans-aconitate 3-methyltransferase; structural genomics, protein structure initiative, PSI, center for eukaryotic structural genomics; HET: MSE SAH T8N; 1.12A {Saccharomyces cerevisiae}
Probab=99.45 E-value=1.2e-13 Score=138.02 Aligned_cols=91 Identities=12% Similarity=0.075 Sum_probs=78.4
Q ss_pred CCCCCeEEEEcCCCCHhHHHHHh--cCCCcEEEEecCCC-----------------CCcEEeccCCCCCCCC------Cc
Q 010086 114 LSQSAKSLCVETQYGQDVFALKE--IGVEDSIGIFKKSS-----------------KPLVISGEGHRIPFDG------NT 168 (518)
Q Consensus 114 l~~~~rvLDVGcGtG~~~~~L~~--~g~~~v~gID~s~~-----------------~~l~~~~da~~LPf~D------~S 168 (518)
..++.+|||||||+|..+..|++ .+..+|+|+|+++. ...++++|++++|+++ ++
T Consensus 34 ~~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~ 113 (299)
T 3g5t_A 34 DGERKLLVDVGCGPGTATLQMAQELKPFEQIIGSDLSATMIKTAEVIKEGSPDTYKNVSFKISSSDDFKFLGADSVDKQK 113 (299)
T ss_dssp CSCCSEEEEETCTTTHHHHHHHHHSSCCSEEEEEESCHHHHHHHHHHHHHCC-CCTTEEEEECCTTCCGGGCTTTTTSSC
T ss_pred cCCCCEEEEECCCCCHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHhccCCCCceEEEEcCHHhCCccccccccCCC
Confidence 46789999999999999988885 24579999999741 1235689999999988 99
Q ss_pred eeEEEEcCceeeccCChHHHHHHHHhcccCCcEEEEEe
Q 010086 169 FDFVFVGGARLEKASKPLDFASEIVRTLKPEGFAVVHV 206 (518)
Q Consensus 169 FD~V~s~~~~l~~~~dp~~~l~Ei~RVLKPGG~lvi~~ 206 (518)
||+|++..+ +||+ ++..+++++.|+|||||++++..
T Consensus 114 fD~V~~~~~-l~~~-~~~~~l~~~~~~LkpgG~l~i~~ 149 (299)
T 3g5t_A 114 IDMITAVEC-AHWF-DFEKFQRSAYANLRKDGTIAIWG 149 (299)
T ss_dssp EEEEEEESC-GGGS-CHHHHHHHHHHHEEEEEEEEEEE
T ss_pred eeEEeHhhH-HHHh-CHHHHHHHHHHhcCCCcEEEEEe
Confidence 999999997 9999 99999999999999999998843
No 37
>3bkw_A MLL3908 protein, S-adenosylmethionine dependent methyltransferase; NP_104914.1; HET: MSE; 1.60A {Mesorhizobium loti}
Probab=99.45 E-value=3e-13 Score=129.62 Aligned_cols=93 Identities=13% Similarity=0.135 Sum_probs=81.2
Q ss_pred CCCCCeEEEEcCCCCHhHHHHHhcCCCcEEEEecCCC------------CCcEEeccCCCCCCCCCceeEEEEcCceeec
Q 010086 114 LSQSAKSLCVETQYGQDVFALKEIGVEDSIGIFKKSS------------KPLVISGEGHRIPFDGNTFDFVFVGGARLEK 181 (518)
Q Consensus 114 l~~~~rvLDVGcGtG~~~~~L~~~g~~~v~gID~s~~------------~~l~~~~da~~LPf~D~SFD~V~s~~~~l~~ 181 (518)
..++.+|||||||+|..+..+.+.|..+++|+|+++. ...++.+|..++|+++++||+|++..+ ++|
T Consensus 41 ~~~~~~vLdiG~G~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~-l~~ 119 (243)
T 3bkw_A 41 EVGGLRIVDLGCGFGWFCRWAHEHGASYVLGLDLSEKMLARARAAGPDTGITYERADLDKLHLPQDSFDLAYSSLA-LHY 119 (243)
T ss_dssp CCTTCEEEEETCTTCHHHHHHHHTTCSEEEEEESCHHHHHHHHHTSCSSSEEEEECCGGGCCCCTTCEEEEEEESC-GGG
T ss_pred ccCCCEEEEEcCcCCHHHHHHHHCCCCeEEEEcCCHHHHHHHHHhcccCCceEEEcChhhccCCCCCceEEEEecc-ccc
Confidence 3478899999999999999888887559999999741 123568899999999999999999997 999
Q ss_pred cCChHHHHHHHHhcccCCcEEEEEec
Q 010086 182 ASKPLDFASEIVRTLKPEGFAVVHVR 207 (518)
Q Consensus 182 ~~dp~~~l~Ei~RVLKPGG~lvi~~~ 207 (518)
++++..+++++.|+|||||++++.+.
T Consensus 120 ~~~~~~~l~~~~~~L~pgG~l~~~~~ 145 (243)
T 3bkw_A 120 VEDVARLFRTVHQALSPGGHFVFSTE 145 (243)
T ss_dssp CSCHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred cchHHHHHHHHHHhcCcCcEEEEEeC
Confidence 99999999999999999999999764
No 38
>3ou2_A SAM-dependent methyltransferase; O-methyltransferase, SAH; HET: SAH; 1.50A {Streptomyces luridus} PDB: 3ou6_A* 3ou7_A*
Probab=99.45 E-value=3.9e-13 Score=126.50 Aligned_cols=92 Identities=11% Similarity=0.041 Sum_probs=79.4
Q ss_pred CCCCCeEEEEcCCCCHhHHHHHhcCCCcEEEEecCCC-----------CCcEEeccCCCCCCCCCceeEEEEcCceeecc
Q 010086 114 LSQSAKSLCVETQYGQDVFALKEIGVEDSIGIFKKSS-----------KPLVISGEGHRIPFDGNTFDFVFVGGARLEKA 182 (518)
Q Consensus 114 l~~~~rvLDVGcGtG~~~~~L~~~g~~~v~gID~s~~-----------~~l~~~~da~~LPf~D~SFD~V~s~~~~l~~~ 182 (518)
++++.+|||||||+|..+..+++.| .+++|+|+++. ...++.+|..++ +++++||+|++..+ ++|+
T Consensus 44 ~~~~~~vLdiG~G~G~~~~~l~~~~-~~v~~~D~s~~~~~~a~~~~~~~~~~~~~d~~~~-~~~~~~D~v~~~~~-l~~~ 120 (218)
T 3ou2_A 44 GNIRGDVLELASGTGYWTRHLSGLA-DRVTALDGSAEMIAEAGRHGLDNVEFRQQDLFDW-TPDRQWDAVFFAHW-LAHV 120 (218)
T ss_dssp TTSCSEEEEESCTTSHHHHHHHHHS-SEEEEEESCHHHHHHHGGGCCTTEEEEECCTTSC-CCSSCEEEEEEESC-GGGS
T ss_pred CCCCCeEEEECCCCCHHHHHHHhcC-CeEEEEeCCHHHHHHHHhcCCCCeEEEecccccC-CCCCceeEEEEech-hhcC
Confidence 5678899999999999999888876 69999999741 123568899888 89999999999997 9999
Q ss_pred CCh--HHHHHHHHhcccCCcEEEEEecC
Q 010086 183 SKP--LDFASEIVRTLKPEGFAVVHVRA 208 (518)
Q Consensus 183 ~dp--~~~l~Ei~RVLKPGG~lvi~~~~ 208 (518)
+++ ..+++++.|+|||||.+++....
T Consensus 121 ~~~~~~~~l~~~~~~L~pgG~l~~~~~~ 148 (218)
T 3ou2_A 121 PDDRFEAFWESVRSAVAPGGVVEFVDVT 148 (218)
T ss_dssp CHHHHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred CHHHHHHHHHHHHHHcCCCeEEEEEeCC
Confidence 987 78999999999999999987643
No 39
>2ex4_A Adrenal gland protein AD-003; methyltransferase, structural genomics, SGC, structural genomics consortium; HET: SAH; 1.75A {Homo sapiens} SCOP: c.66.1.42
Probab=99.44 E-value=3.7e-13 Score=130.05 Aligned_cols=121 Identities=8% Similarity=0.088 Sum_probs=91.6
Q ss_pred CCCCeEEEEcCCCCHhHHHHHhcCCCcEEEEecCCC---------C------CcEEeccCCCCCCCCCceeEEEEcCcee
Q 010086 115 SQSAKSLCVETQYGQDVFALKEIGVEDSIGIFKKSS---------K------PLVISGEGHRIPFDGNTFDFVFVGGARL 179 (518)
Q Consensus 115 ~~~~rvLDVGcGtG~~~~~L~~~g~~~v~gID~s~~---------~------~l~~~~da~~LPf~D~SFD~V~s~~~~l 179 (518)
+++.+|||||||+|..+..+.+.+..+++|+|+++. . ..++.+|..++|+++++||+|++..+ +
T Consensus 78 ~~~~~vLDiGcG~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~-l 156 (241)
T 2ex4_A 78 TGTSCALDCGAGIGRITKRLLLPLFREVDMVDITEDFLVQAKTYLGEEGKRVRNYFCCGLQDFTPEPDSYDVIWIQWV-I 156 (241)
T ss_dssp CCCSEEEEETCTTTHHHHHTTTTTCSEEEEEESCHHHHHHHHHHTGGGGGGEEEEEECCGGGCCCCSSCEEEEEEESC-G
T ss_pred CCCCEEEEECCCCCHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHhhhcCCceEEEEEcChhhcCCCCCCEEEEEEcch-h
Confidence 358899999999999998887766569999999741 1 22568899999999999999999997 9
Q ss_pred eccCChH--HHHHHHHhcccCCcEEEEEecCCC------------ccCchhHhhhcc--CccEEEEeccCCCC
Q 010086 180 EKASKPL--DFASEIVRTLKPEGFAVVHVRAKD------------EYSFNSFLDLFN--SCKLVKSRDIDGID 236 (518)
Q Consensus 180 ~~~~dp~--~~l~Ei~RVLKPGG~lvi~~~~~~------------~~s~~~~~~lf~--~~~~v~~~~v~~~~ 236 (518)
+|++++. .+++++.|+|||||++++...... ..+...+..++. .|+++......+|.
T Consensus 157 ~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~~~~~~~~~~~ 229 (241)
T 2ex4_A 157 GHLTDQHLAEFLRRCKGSLRPNGIIVIKDNMAQEGVILDDVDSSVCRDLDVVRRIICSAGLSLLAEERQENLP 229 (241)
T ss_dssp GGSCHHHHHHHHHHHHHHEEEEEEEEEEEEEBSSSEEEETTTTEEEEBHHHHHHHHHHTTCCEEEEEECCSCC
T ss_pred hhCCHHHHHHHHHHHHHhcCCCeEEEEEEccCCCcceecccCCcccCCHHHHHHHHHHcCCeEEEeeecCCCc
Confidence 9998865 899999999999999988642111 013344555543 46777766655443
No 40
>3vc1_A Geranyl diphosphate 2-C-methyltransferase; rossmann fold, methyltransferase fold, SAM-dependent methyltransferase; HET: SAH GST GOL; 1.82A {Streptomyces coelicolor} PDB: 3vc2_A* 4f84_A* 4f85_A 4f86_A*
Probab=99.44 E-value=4.3e-13 Score=135.19 Aligned_cols=97 Identities=15% Similarity=0.043 Sum_probs=81.9
Q ss_pred HHHHcCC-CCCCCeEEEEcCCCCHhHHHHHhc-CCCcEEEEecCCC----------------CCcEEeccCCCCCCCCCc
Q 010086 107 DLISEGY-LSQSAKSLCVETQYGQDVFALKEI-GVEDSIGIFKKSS----------------KPLVISGEGHRIPFDGNT 168 (518)
Q Consensus 107 ~L~~~gl-l~~~~rvLDVGcGtG~~~~~L~~~-g~~~v~gID~s~~----------------~~l~~~~da~~LPf~D~S 168 (518)
.+++... ++++.+|||||||+|..+..+++. | .+|+|+|+++. ...++.+|+.++||++++
T Consensus 107 ~l~~~l~~~~~~~~vLDiGcG~G~~~~~la~~~~-~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~ 185 (312)
T 3vc1_A 107 FLMDHLGQAGPDDTLVDAGCGRGGSMVMAHRRFG-SRVEGVTLSAAQADFGNRRARELRIDDHVRSRVCNMLDTPFDKGA 185 (312)
T ss_dssp HHHTTSCCCCTTCEEEEESCTTSHHHHHHHHHHC-CEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCCCCTTC
T ss_pred HHHHHhccCCCCCEEEEecCCCCHHHHHHHHHcC-CEEEEEeCCHHHHHHHHHHHHHcCCCCceEEEECChhcCCCCCCC
Confidence 3444333 678899999999999999888876 6 68999999741 133578999999999999
Q ss_pred eeEEEEcCceeeccCChHHHHHHHHhcccCCcEEEEEe
Q 010086 169 FDFVFVGGARLEKASKPLDFASEIVRTLKPEGFAVVHV 206 (518)
Q Consensus 169 FD~V~s~~~~l~~~~dp~~~l~Ei~RVLKPGG~lvi~~ 206 (518)
||+|++..+ ++|+ ++..+++++.|+|||||++++..
T Consensus 186 fD~V~~~~~-l~~~-~~~~~l~~~~~~LkpgG~l~~~~ 221 (312)
T 3vc1_A 186 VTASWNNES-TMYV-DLHDLFSEHSRFLKVGGRYVTIT 221 (312)
T ss_dssp EEEEEEESC-GGGS-CHHHHHHHHHHHEEEEEEEEEEE
T ss_pred EeEEEECCc-hhhC-CHHHHHHHHHHHcCCCcEEEEEE
Confidence 999999997 9998 69999999999999999998875
No 41
>2p8j_A S-adenosylmethionine-dependent methyltransferase; NP_349143.1; HET: PGE GOL; 2.00A {Clostridium acetobutylicum}
Probab=99.43 E-value=4.8e-13 Score=125.53 Aligned_cols=92 Identities=22% Similarity=0.285 Sum_probs=77.1
Q ss_pred CCCCCeEEEEcCCCCHh-HHHHHhcCCCcEEEEecCCC--------------CCcEEeccCCCCCCCCCceeEEEEcCce
Q 010086 114 LSQSAKSLCVETQYGQD-VFALKEIGVEDSIGIFKKSS--------------KPLVISGEGHRIPFDGNTFDFVFVGGAR 178 (518)
Q Consensus 114 l~~~~rvLDVGcGtG~~-~~~L~~~g~~~v~gID~s~~--------------~~l~~~~da~~LPf~D~SFD~V~s~~~~ 178 (518)
+.++.+|||+|||+|.. ...+++.| .+++|+|+++. ...++.+|+.++|+++++||+|++..+
T Consensus 21 ~~~~~~vLDiGcG~G~~~~~~~~~~~-~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~- 98 (209)
T 2p8j_A 21 SNLDKTVLDCGAGGDLPPLSIFVEDG-YKTYGIEISDLQLKKAENFSRENNFKLNISKGDIRKLPFKDESMSFVYSYGT- 98 (209)
T ss_dssp SSSCSEEEEESCCSSSCTHHHHHHTT-CEEEEEECCHHHHHHHHHHHHHHTCCCCEEECCTTSCCSCTTCEEEEEECSC-
T ss_pred cCCCCEEEEECCCCCHHHHHHHHhCC-CEEEEEECCHHHHHHHHHHHHhcCCceEEEECchhhCCCCCCceeEEEEcCh-
Confidence 45788999999999997 45556666 59999999741 234678999999999999999999987
Q ss_pred eecc--CChHHHHHHHHhcccCCcEEEEEec
Q 010086 179 LEKA--SKPLDFASEIVRTLKPEGFAVVHVR 207 (518)
Q Consensus 179 l~~~--~dp~~~l~Ei~RVLKPGG~lvi~~~ 207 (518)
++|+ .++.++++++.|+|||||++++...
T Consensus 99 l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 129 (209)
T 2p8j_A 99 IFHMRKNDVKEAIDEIKRVLKPGGLACINFL 129 (209)
T ss_dssp GGGSCHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred HHhCCHHHHHHHHHHHHHHcCCCcEEEEEEe
Confidence 9998 5678899999999999999998753
No 42
>3dtn_A Putative methyltransferase MM_2633; structural genomics, unknown function, PSI-2, protein structure initiative; 2.09A {Methanosarcina mazei}
Probab=99.43 E-value=4.3e-13 Score=128.41 Aligned_cols=104 Identities=13% Similarity=0.071 Sum_probs=82.5
Q ss_pred HHHHHHHHHHcC-CCCCCCeEEEEcCCCCHhHHHHHhcC-CCcEEEEecCCC-------------CCcEEeccCCCCCCC
Q 010086 101 YSSVFQDLISEG-YLSQSAKSLCVETQYGQDVFALKEIG-VEDSIGIFKKSS-------------KPLVISGEGHRIPFD 165 (518)
Q Consensus 101 ~~~l~~~L~~~g-ll~~~~rvLDVGcGtG~~~~~L~~~g-~~~v~gID~s~~-------------~~l~~~~da~~LPf~ 165 (518)
+....+.+...- ...++.+|||||||+|..+..+.+.. ..+++|+|+++. ...++.+|..++|++
T Consensus 28 ~~~~~~~~~~~~~~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~d~~~~~~~ 107 (234)
T 3dtn_A 28 FDDFYGVSVSIASVDTENPDILDLGAGTGLLSAFLMEKYPEATFTLVDMSEKMLEIAKNRFRGNLKVKYIEADYSKYDFE 107 (234)
T ss_dssp HHHHHHHHHHTCCCSCSSCEEEEETCTTSHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHTCSCTTEEEEESCTTTCCCC
T ss_pred HHHHHHHHHHHhhcCCCCCeEEEecCCCCHHHHHHHHhCCCCeEEEEECCHHHHHHHHHhhccCCCEEEEeCchhccCCC
Confidence 344444444332 24578899999999999998888763 369999999741 123578999999998
Q ss_pred CCceeEEEEcCceeeccCChH--HHHHHHHhcccCCcEEEEEe
Q 010086 166 GNTFDFVFVGGARLEKASKPL--DFASEIVRTLKPEGFAVVHV 206 (518)
Q Consensus 166 D~SFD~V~s~~~~l~~~~dp~--~~l~Ei~RVLKPGG~lvi~~ 206 (518)
++||+|++..+ ++|++++. .+++++.|+|||||++++..
T Consensus 108 -~~fD~v~~~~~-l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 148 (234)
T 3dtn_A 108 -EKYDMVVSALS-IHHLEDEDKKELYKRSYSILKESGIFINAD 148 (234)
T ss_dssp -SCEEEEEEESC-GGGSCHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred -CCceEEEEeCc-cccCCHHHHHHHHHHHHHhcCCCcEEEEEE
Confidence 99999999997 99998776 48999999999999999875
No 43
>3pfg_A N-methyltransferase; N,N-dimethyltransferase, SAM binding, DTDP-linked sugar BIND transferase; HET: SAM TLO; 1.35A {Streptomyces fradiae} PDB: 3pfh_A* 3px3_A* 3px2_A*
Probab=99.42 E-value=4.3e-13 Score=131.06 Aligned_cols=107 Identities=14% Similarity=0.153 Sum_probs=84.0
Q ss_pred hhHHHHHhhHHHHHHHHHHcCCCCCCCeEEEEcCCCCHhHHHHHhcCCCcEEEEecCCC----------CCcEEeccCCC
Q 010086 92 KEWIKAVNFYSSVFQDLISEGYLSQSAKSLCVETQYGQDVFALKEIGVEDSIGIFKKSS----------KPLVISGEGHR 161 (518)
Q Consensus 92 ~~wr~~v~~~~~l~~~L~~~gll~~~~rvLDVGcGtG~~~~~L~~~g~~~v~gID~s~~----------~~l~~~~da~~ 161 (518)
..|+...+.+..++... ++++.+|||||||+|..+..+.+.+ .+++|+|+++. ...++.+|+.+
T Consensus 31 ~~~~~~~~~~~~~l~~~-----~~~~~~vLDiGcG~G~~~~~l~~~~-~~v~gvD~s~~~~~~a~~~~~~~~~~~~d~~~ 104 (263)
T 3pfg_A 31 KDYHREAADLAALVRRH-----SPKAASLLDVACGTGMHLRHLADSF-GTVEGLELSADMLAIARRRNPDAVLHHGDMRD 104 (263)
T ss_dssp CCHHHHHHHHHHHHHHH-----CTTCCEEEEETCTTSHHHHHHTTTS-SEEEEEESCHHHHHHHHHHCTTSEEEECCTTT
T ss_pred CCHHHHHHHHHHHHHhh-----CCCCCcEEEeCCcCCHHHHHHHHcC-CeEEEEECCHHHHHHHHhhCCCCEEEECChHH
Confidence 44555444433333222 4567899999999999999998876 68999999741 23467899999
Q ss_pred CCCCCCceeEEEEcC-ceeeccC---ChHHHHHHHHhcccCCcEEEEEe
Q 010086 162 IPFDGNTFDFVFVGG-ARLEKAS---KPLDFASEIVRTLKPEGFAVVHV 206 (518)
Q Consensus 162 LPf~D~SFD~V~s~~-~~l~~~~---dp~~~l~Ei~RVLKPGG~lvi~~ 206 (518)
+|+ +++||+|++.. + ++|+. ++..+++++.|+|||||++++..
T Consensus 105 ~~~-~~~fD~v~~~~~~-l~~~~~~~~~~~~l~~~~~~L~pgG~l~i~~ 151 (263)
T 3pfg_A 105 FSL-GRRFSAVTCMFSS-IGHLAGQAELDAALERFAAHVLPDGVVVVEP 151 (263)
T ss_dssp CCC-SCCEEEEEECTTG-GGGSCHHHHHHHHHHHHHHTEEEEEEEEECC
T ss_pred CCc-cCCcCEEEEcCch-hhhcCCHHHHHHHHHHHHHhcCCCcEEEEEe
Confidence 998 89999999997 7 99996 44578999999999999999974
No 44
>3jwg_A HEN1, methyltransferase type 12; 1.90A {Clostridium thermocellum} PDB: 3jwi_A
Probab=99.42 E-value=2.6e-13 Score=128.89 Aligned_cols=91 Identities=13% Similarity=0.033 Sum_probs=77.0
Q ss_pred CCCCeEEEEcCCCCHhHHHHHhcCC-CcEEEEecCCC--------------------CCcEEeccCCCCCCCCCceeEEE
Q 010086 115 SQSAKSLCVETQYGQDVFALKEIGV-EDSIGIFKKSS--------------------KPLVISGEGHRIPFDGNTFDFVF 173 (518)
Q Consensus 115 ~~~~rvLDVGcGtG~~~~~L~~~g~-~~v~gID~s~~--------------------~~l~~~~da~~LPf~D~SFD~V~ 173 (518)
.++.+|||||||+|..+..+++.+. .+++|+|+++. ...++.+|...+|+++++||+|+
T Consensus 28 ~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~V~ 107 (219)
T 3jwg_A 28 VNAKKVIDLGCGEGNLLSLLLKDKSFEQITGVDVSYSVLERAKDRLKIDRLPEMQRKRISLFQSSLVYRDKRFSGYDAAT 107 (219)
T ss_dssp TTCCEEEEETCTTCHHHHHHHTSTTCCEEEEEESCHHHHHHHHHHHTGGGSCHHHHTTEEEEECCSSSCCGGGTTCSEEE
T ss_pred cCCCEEEEecCCCCHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHhhccccccCcceEEEeCcccccccccCCCCEEE
Confidence 4678999999999999999987653 69999999841 22356889989999999999999
Q ss_pred EcCceeeccCCh--HHHHHHHHhcccCCcEEEEEe
Q 010086 174 VGGARLEKASKP--LDFASEIVRTLKPEGFAVVHV 206 (518)
Q Consensus 174 s~~~~l~~~~dp--~~~l~Ei~RVLKPGG~lvi~~ 206 (518)
+..+ ++|++++ .++++++.|+|||||+++...
T Consensus 108 ~~~~-l~~~~~~~~~~~l~~~~~~LkpgG~~i~~~ 141 (219)
T 3jwg_A 108 VIEV-IEHLDENRLQAFEKVLFEFTRPQTVIVSTP 141 (219)
T ss_dssp EESC-GGGCCHHHHHHHHHHHHTTTCCSEEEEEEE
T ss_pred EHHH-HHhCCHHHHHHHHHHHHHhhCCCEEEEEcc
Confidence 9998 9999877 689999999999999766654
No 45
>3jwh_A HEN1; methyltransferase; HET: SAH; 2.20A {Anabaena variabilis} PDB: 3jwj_A
Probab=99.41 E-value=2.6e-13 Score=128.90 Aligned_cols=91 Identities=14% Similarity=0.058 Sum_probs=76.9
Q ss_pred CCCCeEEEEcCCCCHhHHHHHhcC-CCcEEEEecCCC--------------------CCcEEeccCCCCCCCCCceeEEE
Q 010086 115 SQSAKSLCVETQYGQDVFALKEIG-VEDSIGIFKKSS--------------------KPLVISGEGHRIPFDGNTFDFVF 173 (518)
Q Consensus 115 ~~~~rvLDVGcGtG~~~~~L~~~g-~~~v~gID~s~~--------------------~~l~~~~da~~LPf~D~SFD~V~ 173 (518)
.++.+|||||||+|..+..+++.+ ..+++|+|+++. ...++.+|...+++++++||+|+
T Consensus 28 ~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~v~ 107 (217)
T 3jwh_A 28 SNARRVIDLGCGQGNLLKILLKDSFFEQITGVDVSYRSLEIAQERLDRLRLPRNQWERLQLIQGALTYQDKRFHGYDAAT 107 (217)
T ss_dssp TTCCEEEEETCTTCHHHHHHHHCTTCSEEEEEESCHHHHHHHHHHHTTCCCCHHHHTTEEEEECCTTSCCGGGCSCSEEE
T ss_pred cCCCEEEEeCCCCCHHHHHHHhhCCCCEEEEEECCHHHHHHHHHHHHHhcCCcccCcceEEEeCCcccccccCCCcCEEe
Confidence 467899999999999999998864 369999999741 12356788888888899999999
Q ss_pred EcCceeeccCCh--HHHHHHHHhcccCCcEEEEEe
Q 010086 174 VGGARLEKASKP--LDFASEIVRTLKPEGFAVVHV 206 (518)
Q Consensus 174 s~~~~l~~~~dp--~~~l~Ei~RVLKPGG~lvi~~ 206 (518)
+..+ ++|++++ ..+++++.|+|||||++++..
T Consensus 108 ~~~~-l~~~~~~~~~~~l~~~~~~LkpgG~li~~~ 141 (217)
T 3jwh_A 108 VIEV-IEHLDLSRLGAFERVLFEFAQPKIVIVTTP 141 (217)
T ss_dssp EESC-GGGCCHHHHHHHHHHHHTTTCCSEEEEEEE
T ss_pred eHHH-HHcCCHHHHHHHHHHHHHHcCCCEEEEEcc
Confidence 9998 9999877 789999999999999776654
No 46
>3cc8_A Putative methyltransferase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS transferase; 1.64A {Bacillus cereus}
Probab=99.40 E-value=5.1e-13 Score=126.26 Aligned_cols=92 Identities=22% Similarity=0.306 Sum_probs=80.2
Q ss_pred CCCCeEEEEcCCCCHhHHHHHhcCCCcEEEEecCCC--------CCcEEeccCCC--CCCCCCceeEEEEcCceeeccCC
Q 010086 115 SQSAKSLCVETQYGQDVFALKEIGVEDSIGIFKKSS--------KPLVISGEGHR--IPFDGNTFDFVFVGGARLEKASK 184 (518)
Q Consensus 115 ~~~~rvLDVGcGtG~~~~~L~~~g~~~v~gID~s~~--------~~l~~~~da~~--LPf~D~SFD~V~s~~~~l~~~~d 184 (518)
.++.+|||||||+|..+..+.+.| .+++|+|+++. ...+..+|..+ +|+++++||+|++..+ ++|+++
T Consensus 31 ~~~~~vLdiG~G~G~~~~~l~~~~-~~~~~~D~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~fD~v~~~~~-l~~~~~ 108 (230)
T 3cc8_A 31 KEWKEVLDIGCSSGALGAAIKENG-TRVSGIEAFPEAAEQAKEKLDHVVLGDIETMDMPYEEEQFDCVIFGDV-LEHLFD 108 (230)
T ss_dssp TTCSEEEEETCTTSHHHHHHHTTT-CEEEEEESSHHHHHHHHTTSSEEEESCTTTCCCCSCTTCEEEEEEESC-GGGSSC
T ss_pred cCCCcEEEeCCCCCHHHHHHHhcC-CeEEEEeCCHHHHHHHHHhCCcEEEcchhhcCCCCCCCccCEEEECCh-hhhcCC
Confidence 578899999999999998888776 79999999741 23456788776 7899999999999997 999999
Q ss_pred hHHHHHHHHhcccCCcEEEEEecC
Q 010086 185 PLDFASEIVRTLKPEGFAVVHVRA 208 (518)
Q Consensus 185 p~~~l~Ei~RVLKPGG~lvi~~~~ 208 (518)
+..+++++.|+|||||.+++.+..
T Consensus 109 ~~~~l~~~~~~L~~gG~l~~~~~~ 132 (230)
T 3cc8_A 109 PWAVIEKVKPYIKQNGVILASIPN 132 (230)
T ss_dssp HHHHHHHTGGGEEEEEEEEEEEEC
T ss_pred HHHHHHHHHHHcCCCCEEEEEeCC
Confidence 999999999999999999998654
No 47
>3ofk_A Nodulation protein S; NODS, N-methyltransferase, SAH, SAM, NOD factor, fixation, symbiosis, alpha/beta structure; HET: SAH; 1.85A {Bradyrhizobium SP} PDB: 3ofj_A*
Probab=99.40 E-value=7.7e-13 Score=125.13 Aligned_cols=90 Identities=14% Similarity=0.068 Sum_probs=77.5
Q ss_pred CCCCCeEEEEcCCCCHhHHHHHhcCCCcEEEEecCCC-------------CCcEEeccCCCCCCCCCceeEEEEcCceee
Q 010086 114 LSQSAKSLCVETQYGQDVFALKEIGVEDSIGIFKKSS-------------KPLVISGEGHRIPFDGNTFDFVFVGGARLE 180 (518)
Q Consensus 114 l~~~~rvLDVGcGtG~~~~~L~~~g~~~v~gID~s~~-------------~~l~~~~da~~LPf~D~SFD~V~s~~~~l~ 180 (518)
..++.+|||||||+|..+..+.+.+ .+++|+|+++. ...++.+|+.+++ ++++||+|++..+ ++
T Consensus 49 ~~~~~~vLDiGcG~G~~~~~l~~~~-~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~d~~~~~-~~~~fD~v~~~~~-l~ 125 (216)
T 3ofk_A 49 SGAVSNGLEIGCAAGAFTEKLAPHC-KRLTVIDVMPRAIGRACQRTKRWSHISWAATDILQFS-TAELFDLIVVAEV-LY 125 (216)
T ss_dssp TSSEEEEEEECCTTSHHHHHHGGGE-EEEEEEESCHHHHHHHHHHTTTCSSEEEEECCTTTCC-CSCCEEEEEEESC-GG
T ss_pred cCCCCcEEEEcCCCCHHHHHHHHcC-CEEEEEECCHHHHHHHHHhcccCCCeEEEEcchhhCC-CCCCccEEEEccH-HH
Confidence 4567899999999999999998876 69999999741 1235689999998 7899999999998 99
Q ss_pred ccCChH---HHHHHHHhcccCCcEEEEEe
Q 010086 181 KASKPL---DFASEIVRTLKPEGFAVVHV 206 (518)
Q Consensus 181 ~~~dp~---~~l~Ei~RVLKPGG~lvi~~ 206 (518)
|+.++. ++++++.|+|||||++++.+
T Consensus 126 ~~~~~~~~~~~l~~~~~~L~pgG~l~~~~ 154 (216)
T 3ofk_A 126 YLEDMTQMRTAIDNMVKMLAPGGHLVFGS 154 (216)
T ss_dssp GSSSHHHHHHHHHHHHHTEEEEEEEEEEE
T ss_pred hCCCHHHHHHHHHHHHHHcCCCCEEEEEe
Confidence 999884 67999999999999999875
No 48
>2pxx_A Uncharacterized protein MGC2408; structural genomics consortium, SGC, methyltransferase, LOC84291, transferase; HET: SAH; 1.30A {Homo sapiens}
Probab=99.40 E-value=6.7e-13 Score=124.40 Aligned_cols=94 Identities=19% Similarity=0.186 Sum_probs=79.4
Q ss_pred CCCCCeEEEEcCCCCHhHHHHHhcCCCcEEEEecCCC-------------CCcEEeccCCCCCCCCCceeEEEEcCceee
Q 010086 114 LSQSAKSLCVETQYGQDVFALKEIGVEDSIGIFKKSS-------------KPLVISGEGHRIPFDGNTFDFVFVGGARLE 180 (518)
Q Consensus 114 l~~~~rvLDVGcGtG~~~~~L~~~g~~~v~gID~s~~-------------~~l~~~~da~~LPf~D~SFD~V~s~~~~l~ 180 (518)
++++.+|||+|||+|..+..+.+.|..+++|+|+++. ...++.+|+.++|+++++||+|++... ++
T Consensus 40 ~~~~~~vLdiGcG~G~~~~~l~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~i~~~~~d~~~~~~~~~~fD~v~~~~~-~~ 118 (215)
T 2pxx_A 40 LRPEDRILVLGCGNSALSYELFLGGFPNVTSVDYSSVVVAAMQACYAHVPQLRWETMDVRKLDFPSASFDVVLEKGT-LD 118 (215)
T ss_dssp CCTTCCEEEETCTTCSHHHHHHHTTCCCEEEEESCHHHHHHHHHHTTTCTTCEEEECCTTSCCSCSSCEEEEEEESH-HH
T ss_pred cCCCCeEEEECCCCcHHHHHHHHcCCCcEEEEeCCHHHHHHHHHhcccCCCcEEEEcchhcCCCCCCcccEEEECcc-hh
Confidence 4788999999999999998888877569999999741 234578999999999999999999886 76
Q ss_pred ccC---------------ChHHHHHHHHhcccCCcEEEEEecC
Q 010086 181 KAS---------------KPLDFASEIVRTLKPEGFAVVHVRA 208 (518)
Q Consensus 181 ~~~---------------dp~~~l~Ei~RVLKPGG~lvi~~~~ 208 (518)
++. ++.++++++.|+|||||++++....
T Consensus 119 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~~~ 161 (215)
T 2pxx_A 119 ALLAGERDPWTVSSEGVHTVDQVLSEVSRVLVPGGRFISMTSA 161 (215)
T ss_dssp HHTTTCSCTTSCCHHHHHHHHHHHHHHHHHEEEEEEEEEEESC
T ss_pred hhccccccccccccchhHHHHHHHHHHHHhCcCCCEEEEEeCC
Confidence 654 5578999999999999999987643
No 49
>3e8s_A Putative SAM dependent methyltransferase; NP_744700.1, structural genomics, joint center for structural genom JCSG; HET: SAH; 2.10A {Pseudomonas putida KT2440}
Probab=99.39 E-value=4e-12 Score=119.88 Aligned_cols=90 Identities=18% Similarity=0.186 Sum_probs=74.2
Q ss_pred CCCCeEEEEcCCCCHhHHHHHhcCCCcEEEEecCCC---------CCcEEeccCCCC---CCCCC-ceeEEEEcCceeec
Q 010086 115 SQSAKSLCVETQYGQDVFALKEIGVEDSIGIFKKSS---------KPLVISGEGHRI---PFDGN-TFDFVFVGGARLEK 181 (518)
Q Consensus 115 ~~~~rvLDVGcGtG~~~~~L~~~g~~~v~gID~s~~---------~~l~~~~da~~L---Pf~D~-SFD~V~s~~~~l~~ 181 (518)
.++.+|||||||+|..+..+++.| .+++|+|+++. ...+..++..++ |+.++ +||+|++..+ ++
T Consensus 51 ~~~~~vLdiG~G~G~~~~~l~~~~-~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~fD~v~~~~~-l~- 127 (227)
T 3e8s_A 51 RQPERVLDLGCGEGWLLRALADRG-IEAVGVDGDRTLVDAARAAGAGEVHLASYAQLAEAKVPVGKDYDLICANFA-LL- 127 (227)
T ss_dssp TCCSEEEEETCTTCHHHHHHHTTT-CEEEEEESCHHHHHHHHHTCSSCEEECCHHHHHTTCSCCCCCEEEEEEESC-CC-
T ss_pred CCCCEEEEeCCCCCHHHHHHHHCC-CEEEEEcCCHHHHHHHHHhcccccchhhHHhhcccccccCCCccEEEECch-hh-
Confidence 456899999999999999998886 58999999842 233556666665 66555 5999999987 87
Q ss_pred cCChHHHHHHHHhcccCCcEEEEEec
Q 010086 182 ASKPLDFASEIVRTLKPEGFAVVHVR 207 (518)
Q Consensus 182 ~~dp~~~l~Ei~RVLKPGG~lvi~~~ 207 (518)
..++..+++++.|+|||||++++...
T Consensus 128 ~~~~~~~l~~~~~~L~pgG~l~~~~~ 153 (227)
T 3e8s_A 128 HQDIIELLSAMRTLLVPGGALVIQTL 153 (227)
T ss_dssp SSCCHHHHHHHHHTEEEEEEEEEEEC
T ss_pred hhhHHHHHHHHHHHhCCCeEEEEEec
Confidence 78899999999999999999999864
No 50
>3cgg_A SAM-dependent methyltransferase; NP_600671.1, methyltransferase domain, structural genomics; HET: NHE CIT; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=99.39 E-value=3.6e-12 Score=117.13 Aligned_cols=116 Identities=19% Similarity=0.210 Sum_probs=91.9
Q ss_pred CCCCCeEEEEcCCCCHhHHHHHhcCCCcEEEEecCCC----------CCcEEeccCCCCCCCCCceeEEEEc-Cceeecc
Q 010086 114 LSQSAKSLCVETQYGQDVFALKEIGVEDSIGIFKKSS----------KPLVISGEGHRIPFDGNTFDFVFVG-GARLEKA 182 (518)
Q Consensus 114 l~~~~rvLDVGcGtG~~~~~L~~~g~~~v~gID~s~~----------~~l~~~~da~~LPf~D~SFD~V~s~-~~~l~~~ 182 (518)
++++.+|||||||+|..+..+.+.+ .+++|+|+++. ...++.+|..++|+++++||+|++. .. ++|+
T Consensus 44 ~~~~~~vLdiG~G~G~~~~~l~~~~-~~v~~~D~~~~~~~~a~~~~~~~~~~~~d~~~~~~~~~~~D~i~~~~~~-~~~~ 121 (195)
T 3cgg_A 44 APRGAKILDAGCGQGRIGGYLSKQG-HDVLGTDLDPILIDYAKQDFPEARWVVGDLSVDQISETDFDLIVSAGNV-MGFL 121 (195)
T ss_dssp SCTTCEEEEETCTTTHHHHHHHHTT-CEEEEEESCHHHHHHHHHHCTTSEEEECCTTTSCCCCCCEEEEEECCCC-GGGS
T ss_pred ccCCCeEEEECCCCCHHHHHHHHCC-CcEEEEcCCHHHHHHHHHhCCCCcEEEcccccCCCCCCceeEEEECCcH-Hhhc
Confidence 5788999999999999998888876 69999999741 2346788999999999999999998 55 7877
Q ss_pred CC--hHHHHHHHHhcccCCcEEEEEecCCCccCchhHhhhcc--CccEEEEec
Q 010086 183 SK--PLDFASEIVRTLKPEGFAVVHVRAKDEYSFNSFLDLFN--SCKLVKSRD 231 (518)
Q Consensus 183 ~d--p~~~l~Ei~RVLKPGG~lvi~~~~~~~~s~~~~~~lf~--~~~~v~~~~ 231 (518)
.. +..+++++.|+|||||++++.......++...+..++. .++++....
T Consensus 122 ~~~~~~~~l~~~~~~l~~~G~l~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~~ 174 (195)
T 3cgg_A 122 AEDGREPALANIHRALGADGRAVIGFGAGRGWVFGDFLEVAERVGLELENAFE 174 (195)
T ss_dssp CHHHHHHHHHHHHHHEEEEEEEEEEEETTSSCCHHHHHHHHHHHTEEEEEEES
T ss_pred ChHHHHHHHHHHHHHhCCCCEEEEEeCCCCCcCHHHHHHHHHHcCCEEeeeec
Confidence 43 36899999999999999999876555555566665543 466666544
No 51
>4fsd_A Arsenic methyltransferase; rossmann fold; 1.75A {Cyanidioschyzon SP} PDB: 4fr0_A* 4fs8_A 3p7e_A 3qnh_A 3qhu_A
Probab=99.39 E-value=6.2e-13 Score=138.53 Aligned_cols=92 Identities=17% Similarity=0.182 Sum_probs=78.7
Q ss_pred CCCCCeEEEEcCCCCHhHHHHHhc--CCCcEEEEecCCC-----------------------CCcEEeccCCCC------
Q 010086 114 LSQSAKSLCVETQYGQDVFALKEI--GVEDSIGIFKKSS-----------------------KPLVISGEGHRI------ 162 (518)
Q Consensus 114 l~~~~rvLDVGcGtG~~~~~L~~~--g~~~v~gID~s~~-----------------------~~l~~~~da~~L------ 162 (518)
+.++.+|||||||+|..+..+++. ...+|+|+|+++. ...++.+|++++
T Consensus 81 ~~~~~~VLDlGcG~G~~~~~la~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~g~~~~~~v~~~~~d~~~l~~~~~~ 160 (383)
T 4fsd_A 81 SLEGATVLDLGCGTGRDVYLASKLVGEHGKVIGVDMLDNQLEVARKYVEYHAEKFFGSPSRSNVRFLKGFIENLATAEPE 160 (383)
T ss_dssp GGTTCEEEEESCTTSHHHHHHHHHHTTTCEEEEEECCHHHHHHHHHTHHHHHHHHHSSTTCCCEEEEESCTTCGGGCBSC
T ss_pred CCCCCEEEEecCccCHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHhhhhcccccCCCceEEEEccHHHhhhcccC
Confidence 457889999999999999887764 2359999999741 123568898887
Q ss_pred CCCCCceeEEEEcCceeeccCChHHHHHHHHhcccCCcEEEEEe
Q 010086 163 PFDGNTFDFVFVGGARLEKASKPLDFASEIVRTLKPEGFAVVHV 206 (518)
Q Consensus 163 Pf~D~SFD~V~s~~~~l~~~~dp~~~l~Ei~RVLKPGG~lvi~~ 206 (518)
||++++||+|++..+ ++|++++..+++|+.|+|||||++++..
T Consensus 161 ~~~~~~fD~V~~~~~-l~~~~d~~~~l~~~~r~LkpgG~l~i~~ 203 (383)
T 4fsd_A 161 GVPDSSVDIVISNCV-CNLSTNKLALFKEIHRVLRDGGELYFSD 203 (383)
T ss_dssp CCCTTCEEEEEEESC-GGGCSCHHHHHHHHHHHEEEEEEEEEEE
T ss_pred CCCCCCEEEEEEccc-hhcCCCHHHHHHHHHHHcCCCCEEEEEE
Confidence 999999999999998 9999999999999999999999998863
No 52
>3thr_A Glycine N-methyltransferase; GNMT, folate, methyltransferase binding, liver cytosol, transferase-transferase inhibitor C; HET: C2F TAM; 2.00A {Rattus norvegicus} SCOP: c.66.1.5 PDB: 3ths_A* 1xva_A* 1d2c_A 1kia_A* 1nbh_A* 1bhj_A* 2idj_A 2idk_A* 1d2g_A 1d2h_A* 1nbi_A* 1r8x_A 1r8y_A 1r74_A* 2azt_A*
Probab=99.39 E-value=3.7e-13 Score=133.40 Aligned_cols=92 Identities=18% Similarity=0.183 Sum_probs=79.1
Q ss_pred CCCCeEEEEcCCCCHhHHHHHhcCCCcEEEEecCCC-------------------CCcEEeccCCCCC---CCCCceeEE
Q 010086 115 SQSAKSLCVETQYGQDVFALKEIGVEDSIGIFKKSS-------------------KPLVISGEGHRIP---FDGNTFDFV 172 (518)
Q Consensus 115 ~~~~rvLDVGcGtG~~~~~L~~~g~~~v~gID~s~~-------------------~~l~~~~da~~LP---f~D~SFD~V 172 (518)
.++.+|||||||+|..+..|++.| .+|+|+|+|+. ...+..++..++| |++++||+|
T Consensus 56 ~~~~~vLDiGcG~G~~~~~l~~~~-~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~fD~V 134 (293)
T 3thr_A 56 HGCHRVLDVACGTGVDSIMLVEEG-FSVTSVDASDKMLKYALKERWNRRKEPAFDKWVIEEANWLTLDKDVPAGDGFDAV 134 (293)
T ss_dssp TTCCEEEETTCTTSHHHHHHHHTT-CEEEEEESCHHHHHHHHHHHHHTTTSHHHHTCEEEECCGGGHHHHSCCTTCEEEE
T ss_pred cCCCEEEEecCCCCHHHHHHHHCC-CeEEEEECCHHHHHHHHHhhhhcccccccceeeEeecChhhCccccccCCCeEEE
Confidence 467899999999999999998887 49999999841 0124578888888 999999999
Q ss_pred EEc-CceeeccCC-------hHHHHHHHHhcccCCcEEEEEecC
Q 010086 173 FVG-GARLEKASK-------PLDFASEIVRTLKPEGFAVVHVRA 208 (518)
Q Consensus 173 ~s~-~~~l~~~~d-------p~~~l~Ei~RVLKPGG~lvi~~~~ 208 (518)
+|. .+ ++|+.+ +.++++++.|+|||||++++.+..
T Consensus 135 ~~~g~~-l~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 177 (293)
T 3thr_A 135 ICLGNS-FAHLPDSKGDQSEHRLALKNIASMVRPGGLLVIDHRN 177 (293)
T ss_dssp EECTTC-GGGSCCSSSSSHHHHHHHHHHHHTEEEEEEEEEEEEC
T ss_pred EEcChH-HhhcCccccCHHHHHHHHHHHHHHcCCCeEEEEEeCC
Confidence 998 66 999999 889999999999999999998643
No 53
>1ri5_A MRNA capping enzyme; methyltransferase, M7G, messenger RNA CAP, structural genomics, PSI, protein structure initiative; 2.10A {Encephalitozoon cuniculi} SCOP: c.66.1.34 PDB: 1ri2_A* 1ri3_A* 1ri1_A* 1ri4_A 1z3c_A* 2hv9_A*
Probab=99.38 E-value=7.7e-13 Score=130.60 Aligned_cols=95 Identities=16% Similarity=0.226 Sum_probs=79.8
Q ss_pred CCCCCCeEEEEcCCCCHhHHHHHhcCCCcEEEEecCCC-----------C-----CcEEeccCCCCCC-CCCceeEEEEc
Q 010086 113 YLSQSAKSLCVETQYGQDVFALKEIGVEDSIGIFKKSS-----------K-----PLVISGEGHRIPF-DGNTFDFVFVG 175 (518)
Q Consensus 113 ll~~~~rvLDVGcGtG~~~~~L~~~g~~~v~gID~s~~-----------~-----~l~~~~da~~LPf-~D~SFD~V~s~ 175 (518)
+++++.+|||||||+|..+..+++.|..+++|+|+++. . ..++.+|+.++|+ ++++||+|++.
T Consensus 61 ~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~v~~~ 140 (298)
T 1ri5_A 61 YTKRGDSVLDLGCGKGGDLLKYERAGIGEYYGVDIAEVSINDARVRARNMKRRFKVFFRAQDSYGRHMDLGKEFDVISSQ 140 (298)
T ss_dssp HCCTTCEEEEETCTTTTTHHHHHHHTCSEEEEEESCHHHHHHHHHHHHTSCCSSEEEEEESCTTTSCCCCSSCEEEEEEE
T ss_pred hCCCCCeEEEECCCCCHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHhcCCCccEEEEECCccccccCCCCCcCEEEEC
Confidence 36788999999999999998888777669999999741 1 2356889999999 69999999999
Q ss_pred Cceeec----cCChHHHHHHHHhcccCCcEEEEEecC
Q 010086 176 GARLEK----ASKPLDFASEIVRTLKPEGFAVVHVRA 208 (518)
Q Consensus 176 ~~~l~~----~~dp~~~l~Ei~RVLKPGG~lvi~~~~ 208 (518)
.+ +|| ..++..+++++.|+|||||++++.+..
T Consensus 141 ~~-l~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 176 (298)
T 1ri5_A 141 FS-FHYAFSTSESLDIAQRNIARHLRPGGYFIMTVPS 176 (298)
T ss_dssp SC-GGGGGSSHHHHHHHHHHHHHTEEEEEEEEEEEEC
T ss_pred ch-hhhhcCCHHHHHHHHHHHHHhcCCCCEEEEEECC
Confidence 87 876 456778999999999999999998743
No 54
>2aot_A HMT, histamine N-methyltransferase; classic methyltransferase fold, protein-drug complex; HET: CSO 2PM SAH; 1.90A {Homo sapiens} SCOP: c.66.1.19 PDB: 1jqd_A* 2aou_A* 2aov_A* 2aox_A* 1jqe_A* 2aow_A*
Probab=99.38 E-value=2.8e-13 Score=135.23 Aligned_cols=93 Identities=9% Similarity=-0.065 Sum_probs=69.4
Q ss_pred CCCCCeEEEEcCCCCHhHH----HHHhc-CCCc--EEEEecCCC------------C--Cc----EEeccCCCCC-----
Q 010086 114 LSQSAKSLCVETQYGQDVF----ALKEI-GVED--SIGIFKKSS------------K--PL----VISGEGHRIP----- 163 (518)
Q Consensus 114 l~~~~rvLDVGcGtG~~~~----~L~~~-g~~~--v~gID~s~~------------~--~l----~~~~da~~LP----- 163 (518)
..++.+|||||||+|..+. .+... +... ++|+|+|+. . .. +..+++++++
T Consensus 50 ~~~~~~VLDiG~GtG~~~~~~l~~l~~~~~~~~v~~~~vD~S~~ml~~a~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~ 129 (292)
T 2aot_A 50 TKSEIKILSIGGGAGEIDLQILSKVQAQYPGVCINNEVVEPSAEQIAKYKELVAKTSNLENVKFAWHKETSSEYQSRMLE 129 (292)
T ss_dssp TCSEEEEEEETCTTSHHHHHHHHHHHHHSTTCEEEEEEECSCHHHHHHHHHHHHTCSSCTTEEEEEECSCHHHHHHHHHT
T ss_pred CCCCCeEEEEcCCCCHHHHHHHHHHHhhCCCceeeEEEEeCCHHHHHHHHHHHHhccCCCcceEEEEecchhhhhhhhcc
Confidence 3567899999999997653 23222 2233 499998731 1 11 1244555543
Q ss_pred -CCCCceeEEEEcCceeeccCChHHHHHHHHhcccCCcEEEEEec
Q 010086 164 -FDGNTFDFVFVGGARLEKASKPLDFASEIVRTLKPEGFAVVHVR 207 (518)
Q Consensus 164 -f~D~SFD~V~s~~~~l~~~~dp~~~l~Ei~RVLKPGG~lvi~~~ 207 (518)
|++++||+|++..+ +||++||.++++|++|+|||||++++...
T Consensus 130 ~~~~~~fD~V~~~~~-l~~~~d~~~~l~~~~r~LkpgG~l~i~~~ 173 (292)
T 2aot_A 130 KKELQKWDFIHMIQM-LYYVKDIPATLKFFHSLLGTNAKMLIIVV 173 (292)
T ss_dssp TTCCCCEEEEEEESC-GGGCSCHHHHHHHHHHTEEEEEEEEEEEE
T ss_pred ccCCCceeEEEEeee-eeecCCHHHHHHHHHHHcCCCcEEEEEEe
Confidence 78999999999998 99999999999999999999999998754
No 55
>3lcc_A Putative methyl chloride transferase; halide methyltransferase; HET: SAH; 1.80A {Arabidopsis thaliana}
Probab=99.38 E-value=1.5e-12 Score=125.03 Aligned_cols=126 Identities=16% Similarity=0.177 Sum_probs=92.8
Q ss_pred HHHHHHHcCCCCCCCeEEEEcCCCCHhHHHHHhcCCCcEEEEecCCC---------C-------CcEEeccCCCCCCCCC
Q 010086 104 VFQDLISEGYLSQSAKSLCVETQYGQDVFALKEIGVEDSIGIFKKSS---------K-------PLVISGEGHRIPFDGN 167 (518)
Q Consensus 104 l~~~L~~~gll~~~~rvLDVGcGtG~~~~~L~~~g~~~v~gID~s~~---------~-------~l~~~~da~~LPf~D~ 167 (518)
.+..++....+++ .+|||||||+|..+..|++.| .+++|+|+++. . ..++.+|..+++ +++
T Consensus 55 ~l~~~~~~~~~~~-~~vLDiGcG~G~~~~~l~~~~-~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~-~~~ 131 (235)
T 3lcc_A 55 LIVHLVDTSSLPL-GRALVPGCGGGHDVVAMASPE-RFVVGLDISESALAKANETYGSSPKAEYFSFVKEDVFTWR-PTE 131 (235)
T ss_dssp HHHHHHHTTCSCC-EEEEEETCTTCHHHHHHCBTT-EEEEEECSCHHHHHHHHHHHTTSGGGGGEEEECCCTTTCC-CSS
T ss_pred HHHHHHHhcCCCC-CCEEEeCCCCCHHHHHHHhCC-CeEEEEECCHHHHHHHHHHhhccCCCcceEEEECchhcCC-CCC
Confidence 3344444444444 599999999999999888766 68999999841 1 235688998877 566
Q ss_pred ceeEEEEcCceeeccC--ChHHHHHHHHhcccCCcEEEEEecCCC--------ccCchhHhhhcc--CccEEEEeccC
Q 010086 168 TFDFVFVGGARLEKAS--KPLDFASEIVRTLKPEGFAVVHVRAKD--------EYSFNSFLDLFN--SCKLVKSRDID 233 (518)
Q Consensus 168 SFD~V~s~~~~l~~~~--dp~~~l~Ei~RVLKPGG~lvi~~~~~~--------~~s~~~~~~lf~--~~~~v~~~~v~ 233 (518)
+||+|++..+ ++|++ ++..+++++.|+|||||++++...... .++...+..++. .|+++.+..+.
T Consensus 132 ~fD~v~~~~~-l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~~~~ 208 (235)
T 3lcc_A 132 LFDLIFDYVF-FCAIEPEMRPAWAKSMYELLKPDGELITLMYPITDHVGGPPYKVDVSTFEEVLVPIGFKAVSVEENP 208 (235)
T ss_dssp CEEEEEEESS-TTTSCGGGHHHHHHHHHHHEEEEEEEEEEECCCSCCCSCSSCCCCHHHHHHHHGGGTEEEEEEEECT
T ss_pred CeeEEEEChh-hhcCCHHHHHHHHHHHHHHCCCCcEEEEEEecccccCCCCCccCCHHHHHHHHHHcCCeEEEEEecC
Confidence 9999999987 99998 778999999999999999988643211 134455666665 36777776543
No 56
>3m70_A Tellurite resistance protein TEHB homolog; structural genomics, PSI-2, protein ST initiative; 1.95A {Haemophilus influenzae}
Probab=99.37 E-value=1.5e-12 Score=128.96 Aligned_cols=113 Identities=10% Similarity=0.173 Sum_probs=90.4
Q ss_pred CCCeEEEEcCCCCHhHHHHHhcCCCcEEEEecCCC--------------CCcEEeccCCCCCCCCCceeEEEEcCceeec
Q 010086 116 QSAKSLCVETQYGQDVFALKEIGVEDSIGIFKKSS--------------KPLVISGEGHRIPFDGNTFDFVFVGGARLEK 181 (518)
Q Consensus 116 ~~~rvLDVGcGtG~~~~~L~~~g~~~v~gID~s~~--------------~~l~~~~da~~LPf~D~SFD~V~s~~~~l~~ 181 (518)
++.+|||+|||+|..+..|++.| .+|+|+|+++. ...+..+|..++++ +++||+|++..+ ++|
T Consensus 120 ~~~~vLD~GcG~G~~~~~l~~~g-~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~-~~~fD~i~~~~~-~~~ 196 (286)
T 3m70_A 120 SPCKVLDLGCGQGRNSLYLSLLG-YDVTSWDHNENSIAFLNETKEKENLNISTALYDINAANI-QENYDFIVSTVV-FMF 196 (286)
T ss_dssp CSCEEEEESCTTCHHHHHHHHTT-CEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCGGGCCC-CSCEEEEEECSS-GGG
T ss_pred CCCcEEEECCCCCHHHHHHHHCC-CeEEEEECCHHHHHHHHHHHHHcCCceEEEEeccccccc-cCCccEEEEccc-hhh
Confidence 78899999999999999998887 59999999841 22356889999888 899999999997 999
Q ss_pred cCChH--HHHHHHHhcccCCcEEEEEec--CCC---------ccCchhHhhhccCccEEEEec
Q 010086 182 ASKPL--DFASEIVRTLKPEGFAVVHVR--AKD---------EYSFNSFLDLFNSCKLVKSRD 231 (518)
Q Consensus 182 ~~dp~--~~l~Ei~RVLKPGG~lvi~~~--~~~---------~~s~~~~~~lf~~~~~v~~~~ 231 (518)
+.++. .+++++.|+|||||++++... ..+ .++...+..+|..++++....
T Consensus 197 ~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 259 (286)
T 3m70_A 197 LNRERVPSIIKNMKEHTNVGGYNLIVAAMSTDDVPCPLPFSFTFAENELKEYYKDWEFLEYNE 259 (286)
T ss_dssp SCGGGHHHHHHHHHHTEEEEEEEEEEEEBCCSSSCCSSCCSCCBCTTHHHHHTTTSEEEEEEC
T ss_pred CCHHHHHHHHHHHHHhcCCCcEEEEEEecCCCCCCCCCCccccCCHHHHHHHhcCCEEEEEEc
Confidence 86654 899999999999999777532 111 134456777888888888754
No 57
>3hem_A Cyclopropane-fatty-acyl-phospholipid synthase 2; protein-ligand complex, cytoplasm, lipid synthesis, methyltransferase; HET: D22; 2.39A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kpi_A*
Probab=99.37 E-value=2e-12 Score=129.32 Aligned_cols=97 Identities=13% Similarity=0.104 Sum_probs=79.8
Q ss_pred HHHHHcCCCCCCCeEEEEcCCCCHhHHHHHhc-CCCcEEEEecCCC----------------CCcEEeccCCCCCCCCCc
Q 010086 106 QDLISEGYLSQSAKSLCVETQYGQDVFALKEI-GVEDSIGIFKKSS----------------KPLVISGEGHRIPFDGNT 168 (518)
Q Consensus 106 ~~L~~~gll~~~~rvLDVGcGtG~~~~~L~~~-g~~~v~gID~s~~----------------~~l~~~~da~~LPf~D~S 168 (518)
+.+++...++++.+|||||||+|..+..+++. | .+|+|+|+|+. ...++.+|..++ +++
T Consensus 62 ~~~~~~~~~~~~~~vLDiGcG~G~~~~~la~~~~-~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~---~~~ 137 (302)
T 3hem_A 62 KLALDKLNLEPGMTLLDIGCGWGSTMRHAVAEYD-VNVIGLTLSENQYAHDKAMFDEVDSPRRKEVRIQGWEEF---DEP 137 (302)
T ss_dssp HHHHHTTCCCTTCEEEEETCTTSHHHHHHHHHHC-CEEEEEECCHHHHHHHHHHHHHSCCSSCEEEEECCGGGC---CCC
T ss_pred HHHHHHcCCCCcCEEEEeeccCcHHHHHHHHhCC-CEEEEEECCHHHHHHHHHHHHhcCCCCceEEEECCHHHc---CCC
Confidence 34445545788999999999999999888876 7 79999999841 122567888765 899
Q ss_pred eeEEEEcCceeeccCCh---------HHHHHHHHhcccCCcEEEEEec
Q 010086 169 FDFVFVGGARLEKASKP---------LDFASEIVRTLKPEGFAVVHVR 207 (518)
Q Consensus 169 FD~V~s~~~~l~~~~dp---------~~~l~Ei~RVLKPGG~lvi~~~ 207 (518)
||+|++..+ ++|+++| ..+++++.|+|||||++++...
T Consensus 138 fD~v~~~~~-~~~~~d~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~ 184 (302)
T 3hem_A 138 VDRIVSLGA-FEHFADGAGDAGFERYDTFFKKFYNLTPDDGRMLLHTI 184 (302)
T ss_dssp CSEEEEESC-GGGTTCCSSCCCTTHHHHHHHHHHHSSCTTCEEEEEEE
T ss_pred ccEEEEcch-HHhcCccccccchhHHHHHHHHHHHhcCCCcEEEEEEE
Confidence 999999998 9999887 6899999999999999998753
No 58
>2a14_A Indolethylamine N-methyltransferase; SGC,INMT, structural genomics, structural genomics consortium; HET: SAH; 1.70A {Homo sapiens} SCOP: c.66.1.15
Probab=99.37 E-value=1.7e-13 Score=135.05 Aligned_cols=104 Identities=16% Similarity=0.018 Sum_probs=77.2
Q ss_pred HHHHHHHHHHcCCCCCCCeEEEEcCCCCHhHHHHHhcCCCcEEEEecCCC------------C-C---------------
Q 010086 101 YSSVFQDLISEGYLSQSAKSLCVETQYGQDVFALKEIGVEDSIGIFKKSS------------K-P--------------- 152 (518)
Q Consensus 101 ~~~l~~~L~~~gll~~~~rvLDVGcGtG~~~~~L~~~g~~~v~gID~s~~------------~-~--------------- 152 (518)
....++.+...+ ..++.+|||||||+|..+..++..|..+|+|+|+|+. + .
T Consensus 41 ~~~~~~~~~~~~-~~~g~~vLDiGCG~G~~~~~~~~~~~~~v~g~D~s~~~l~~a~~~~~~~~~~~d~s~~~~~~~~~~~ 119 (263)
T 2a14_A 41 NLECLHKTFGPG-GLQGDTLIDIGSGPTIYQVLAACDSFQDITLSDFTDRNREELEKWLKKEPGAYDWTPAVKFACELEG 119 (263)
T ss_dssp HHHHHHHHHSTT-SCCEEEEEESSCTTCCGGGTTGGGTEEEEEEEESCHHHHHHHHHHHHTCTTCCCCHHHHHHHHHHTT
T ss_pred HHHHHHHHhcCC-CCCCceEEEeCCCccHHHHHHHHhhhcceeeccccHHHHHHHHHHHhcCCCcccchHHHHHHHhcCC
Confidence 333444444333 3577899999999998776666677668999999841 0 0
Q ss_pred -----------------cEEeccCCC-CCCC---CCceeEEEEcCceeecc----CChHHHHHHHHhcccCCcEEEEEe
Q 010086 153 -----------------LVISGEGHR-IPFD---GNTFDFVFVGGARLEKA----SKPLDFASEIVRTLKPEGFAVVHV 206 (518)
Q Consensus 153 -----------------l~~~~da~~-LPf~---D~SFD~V~s~~~~l~~~----~dp~~~l~Ei~RVLKPGG~lvi~~ 206 (518)
.++++|..+ .|++ +++||+|++..+ |||+ +++.++++++.|+|||||.+++..
T Consensus 120 ~~~~~~~~~~~~~~~i~~~~~~D~~~~~~~~~~~~~~fD~V~~~~~-l~~i~~~~~~~~~~l~~i~r~LKPGG~li~~~ 197 (263)
T 2a14_A 120 NSGRWEEKEEKLRAAVKRVLKCDVHLGNPLAPAVLPLADCVLTLLA-MECACCSLDAYRAALCNLASLLKPGGHLVTTV 197 (263)
T ss_dssp CGGGHHHHHHHHHHHEEEEEECCTTSSSTTTTCCCCCEEEEEEESC-HHHHCSSHHHHHHHHHHHHTTEEEEEEEEEEE
T ss_pred CCcchhhHHHHHHhhhheEEeccccCCCCCCccccCCCCEeeehHH-HHHhcCCHHHHHHHHHHHHHHcCCCcEEEEEE
Confidence 155777776 4654 789999999997 9986 344689999999999999999874
No 59
>1ej0_A FTSJ; methyltransferase, adoMet, adenosyl methionine, heat shock proteins, 23S ribosomal RNA; HET: SAM; 1.50A {Escherichia coli} SCOP: c.66.1.2 PDB: 1eiz_A*
Probab=99.36 E-value=1.2e-11 Score=111.30 Aligned_cols=97 Identities=13% Similarity=-0.020 Sum_probs=78.7
Q ss_pred CCCCCCCeEEEEcCCCCHhHHHHHhc-CC-CcEEEEecCCC----CCcEEeccCCCCC--------CCCCceeEEEEcCc
Q 010086 112 GYLSQSAKSLCVETQYGQDVFALKEI-GV-EDSIGIFKKSS----KPLVISGEGHRIP--------FDGNTFDFVFVGGA 177 (518)
Q Consensus 112 gll~~~~rvLDVGcGtG~~~~~L~~~-g~-~~v~gID~s~~----~~l~~~~da~~LP--------f~D~SFD~V~s~~~ 177 (518)
..++++.+|||+|||+|..+..+.+. |. .+++|+|+++. ...+..+|..++| +++++||+|++...
T Consensus 18 ~~~~~~~~vLd~G~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~D~i~~~~~ 97 (180)
T 1ej0_A 18 KLFKPGMTVVDLGAAPGGWSQYVVTQIGGKGRIIACDLLPMDPIVGVDFLQGDFRDELVMKALLERVGDSKVQVVMSDMA 97 (180)
T ss_dssp CCCCTTCEEEEESCTTCHHHHHHHHHHCTTCEEEEEESSCCCCCTTEEEEESCTTSHHHHHHHHHHHTTCCEEEEEECCC
T ss_pred CCCCCCCeEEEeCCCCCHHHHHHHHHhCCCCeEEEEECccccccCcEEEEEcccccchhhhhhhccCCCCceeEEEECCC
Confidence 34678899999999999999888765 43 69999999861 1124578888887 88999999999876
Q ss_pred eeeccCCh-----------HHHHHHHHhcccCCcEEEEEecCC
Q 010086 178 RLEKASKP-----------LDFASEIVRTLKPEGFAVVHVRAK 209 (518)
Q Consensus 178 ~l~~~~dp-----------~~~l~Ei~RVLKPGG~lvi~~~~~ 209 (518)
+++..++ ..+++++.|+|||||.+++.....
T Consensus 98 -~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~~ 139 (180)
T 1ej0_A 98 -PNMSGTPAVDIPRAMYLVELALEMCRDVLAPGGSFVVKVFQG 139 (180)
T ss_dssp -CCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEESS
T ss_pred -ccccCCCccchHHHHHHHHHHHHHHHHHcCCCcEEEEEEecC
Confidence 7777666 688999999999999999875433
No 60
>3gu3_A Methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; HET: SAH; 2.30A {Bacillus cereus} SCOP: c.66.1.49 PDB: 2gh1_A
Probab=99.36 E-value=1.6e-12 Score=129.25 Aligned_cols=92 Identities=13% Similarity=0.236 Sum_probs=78.4
Q ss_pred CCCCCeEEEEcCCCCHhHHHHHhc-C-CCcEEEEecCCC------------C--CcEEeccCCCCCCCCCceeEEEEcCc
Q 010086 114 LSQSAKSLCVETQYGQDVFALKEI-G-VEDSIGIFKKSS------------K--PLVISGEGHRIPFDGNTFDFVFVGGA 177 (518)
Q Consensus 114 l~~~~rvLDVGcGtG~~~~~L~~~-g-~~~v~gID~s~~------------~--~l~~~~da~~LPf~D~SFD~V~s~~~ 177 (518)
+.++.+|||||||+|..+..+++. + ..+++|+|+++. + ..++.+|+.++|++ ++||+|++..+
T Consensus 20 ~~~~~~vLDiGcG~G~~~~~l~~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~v~~~~~d~~~~~~~-~~fD~v~~~~~ 98 (284)
T 3gu3_A 20 ITKPVHIVDYGCGYGYLGLVLMPLLPEGSKYTGIDSGETLLAEARELFRLLPYDSEFLEGDATEIELN-DKYDIAICHAF 98 (284)
T ss_dssp CCSCCEEEEETCTTTHHHHHHTTTSCTTCEEEEEESCHHHHHHHHHHHHSSSSEEEEEESCTTTCCCS-SCEEEEEEESC
T ss_pred cCCCCeEEEecCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHhcCCceEEEEcchhhcCcC-CCeeEEEECCh
Confidence 567899999999999999888775 2 268999999842 1 23568999999995 69999999997
Q ss_pred eeeccCChHHHHHHHHhcccCCcEEEEEec
Q 010086 178 RLEKASKPLDFASEIVRTLKPEGFAVVHVR 207 (518)
Q Consensus 178 ~l~~~~dp~~~l~Ei~RVLKPGG~lvi~~~ 207 (518)
++|++++..+++++.|+|||||++++...
T Consensus 99 -l~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 127 (284)
T 3gu3_A 99 -LLHMTTPETMLQKMIHSVKKGGKIICFEP 127 (284)
T ss_dssp -GGGCSSHHHHHHHHHHTEEEEEEEEEEEC
T ss_pred -hhcCCCHHHHHHHHHHHcCCCCEEEEEec
Confidence 99999999999999999999999998753
No 61
>2g72_A Phenylethanolamine N-methyltransferase; HET: SAM F21; 2.00A {Homo sapiens} SCOP: c.66.1.15 PDB: 1yz3_A* 2an4_A* 2an5_A* 2g70_A* 2g71_A* 2an3_A* 2g8n_A* 2ony_A* 3hcb_A* 3hcc_A* 3hcd_A* 3hcf_A* 3kpj_A* 3kpu_A* 3kpv_A* 3kpw_A* 3kpy_A* 3kqm_A* 3kqo_A* 3kqp_A* ...
Probab=99.36 E-value=4.9e-13 Score=132.99 Aligned_cols=89 Identities=13% Similarity=0.010 Sum_probs=68.4
Q ss_pred CCCeEEEEcCCCCHhHHHHHhcCCCcEEEEecCCCCC-------------------------------------------
Q 010086 116 QSAKSLCVETQYGQDVFALKEIGVEDSIGIFKKSSKP------------------------------------------- 152 (518)
Q Consensus 116 ~~~rvLDVGcGtG~~~~~L~~~g~~~v~gID~s~~~~------------------------------------------- 152 (518)
++.+|||||||+|.....++..+..+|+|+|+|+...
T Consensus 71 ~~~~vLDiGcG~G~~~~l~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~ 150 (289)
T 2g72_A 71 SGRTLIDIGSGPTVYQLLSACSHFEDITMTDFLEVNRQELGRWLQEEPGAFNWSMYSQHACLIEGKGECWQDKERQLRAR 150 (289)
T ss_dssp CCSEEEEETCTTCCGGGTTGGGGCSEEEEECSCHHHHHHHHHHHTTCTTCCCCHHHHHHHHHHHCSCCCHHHHHHHHHHH
T ss_pred CCCeEEEECCCcChHHHHhhccCCCeEEEeCCCHHHHHHHHHHHhhCcccccchhhhhHHHHhcCcccchhhhHHHHHhh
Confidence 6789999999999955444443346999999984100
Q ss_pred --cEEeccCCC-CCCC-----CCceeEEEEcCceeec----cCChHHHHHHHHhcccCCcEEEEE
Q 010086 153 --LVISGEGHR-IPFD-----GNTFDFVFVGGARLEK----ASKPLDFASEIVRTLKPEGFAVVH 205 (518)
Q Consensus 153 --l~~~~da~~-LPf~-----D~SFD~V~s~~~~l~~----~~dp~~~l~Ei~RVLKPGG~lvi~ 205 (518)
.++.+|+.+ +||+ +++||+|+|..+ |+| ++++.++++|+.|+|||||++++.
T Consensus 151 ~~~~~~~D~~~~~~~~~~~~~~~~fD~V~~~~~-l~~~~~~~~~~~~~l~~~~r~LkpGG~l~~~ 214 (289)
T 2g72_A 151 VKRVLPIDVHQPQPLGAGSPAPLPADALVSAFC-LEAVSPDLASFQRALDHITTLLRPGGHLLLI 214 (289)
T ss_dssp EEEEECCCTTSSSTTCSSCSSCSSEEEEEEESC-HHHHCSSHHHHHHHHHHHHTTEEEEEEEEEE
T ss_pred hceEEecccCCCCCccccccCCCCCCEEEehhh-hhhhcCCHHHHHHHHHHHHHhcCCCCEEEEE
Confidence 012337777 7754 567999999997 999 667889999999999999999886
No 62
>3orh_A Guanidinoacetate N-methyltransferase; structura genomics, structural genomics consortium, SGC; HET: SAH; 1.86A {Homo sapiens} PDB: 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=99.35 E-value=2e-13 Score=132.94 Aligned_cols=91 Identities=14% Similarity=0.109 Sum_probs=72.3
Q ss_pred CCCCCeEEEEcCCCCHhHHHHHhcCCCcEEEEecCCC------------C--CcEEeccCCCC--CCCCCceeEEEE---
Q 010086 114 LSQSAKSLCVETQYGQDVFALKEIGVEDSIGIFKKSS------------K--PLVISGEGHRI--PFDGNTFDFVFV--- 174 (518)
Q Consensus 114 l~~~~rvLDVGcGtG~~~~~L~~~g~~~v~gID~s~~------------~--~l~~~~da~~L--Pf~D~SFD~V~s--- 174 (518)
..+|.+|||||||+|..+..+++.+..+++|||+++. . ..++.++++.+ ++++++||.|+.
T Consensus 58 ~~~G~rVLdiG~G~G~~~~~~~~~~~~~v~~id~~~~~~~~a~~~~~~~~~~~~~~~~~a~~~~~~~~~~~FD~i~~D~~ 137 (236)
T 3orh_A 58 SSKGGRVLEVGFGMAIAASKVQEAPIDEHWIIECNDGVFQRLRDWAPRQTHKVIPLKGLWEDVAPTLPDGHFDGILYDTY 137 (236)
T ss_dssp TTTCEEEEEECCTTSHHHHHHTTSCEEEEEEEECCHHHHHHHHHHGGGCSSEEEEEESCHHHHGGGSCTTCEEEEEECCC
T ss_pred ccCCCeEEEECCCccHHHHHHHHhCCcEEEEEeCCHHHHHHHHHHHhhCCCceEEEeehHHhhcccccccCCceEEEeee
Confidence 4678999999999999998888765578999999841 1 12346666544 689999999985
Q ss_pred --cCceeeccCChHHHHHHHHhcccCCcEEEEE
Q 010086 175 --GGARLEKASKPLDFASEIVRTLKPEGFAVVH 205 (518)
Q Consensus 175 --~~~~l~~~~dp~~~l~Ei~RVLKPGG~lvi~ 205 (518)
... ++|..++..+++|+.|+|||||++++.
T Consensus 138 ~~~~~-~~~~~~~~~~~~e~~rvLkPGG~l~f~ 169 (236)
T 3orh_A 138 PLSEE-TWHTHQFNFIKNHAFRLLKPGGVLTYC 169 (236)
T ss_dssp CCBGG-GTTTHHHHHHHHTHHHHEEEEEEEEEC
T ss_pred ecccc-hhhhcchhhhhhhhhheeCCCCEEEEE
Confidence 223 677778889999999999999998874
No 63
>1y8c_A S-adenosylmethionine-dependent methyltransferase; structural genomics, protein structure initiative, PSI; 2.50A {Clostridium acetobutylicum} SCOP: c.66.1.43
Probab=99.35 E-value=1.3e-12 Score=124.91 Aligned_cols=91 Identities=11% Similarity=0.087 Sum_probs=77.7
Q ss_pred CCCCeEEEEcCCCCHhHHHHHhcCCCcEEEEecCCC--------------CCcEEeccCCCCCCCCCceeEEEEcC-cee
Q 010086 115 SQSAKSLCVETQYGQDVFALKEIGVEDSIGIFKKSS--------------KPLVISGEGHRIPFDGNTFDFVFVGG-ARL 179 (518)
Q Consensus 115 ~~~~rvLDVGcGtG~~~~~L~~~g~~~v~gID~s~~--------------~~l~~~~da~~LPf~D~SFD~V~s~~-~~l 179 (518)
.++.+|||||||+|..+..+.+.| .+++|+|+++. ...++.+|..++|++ ++||+|++.. + +
T Consensus 36 ~~~~~vLdiG~G~G~~~~~l~~~~-~~~~~~D~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~-~~fD~v~~~~~~-l 112 (246)
T 1y8c_A 36 LVFDDYLDLACGTGNLTENLCPKF-KNTWAVDLSQEMLSEAENKFRSQGLKPRLACQDISNLNIN-RKFDLITCCLDS-T 112 (246)
T ss_dssp CCTTEEEEETCTTSTTHHHHGGGS-SEEEEECSCHHHHHHHHHHHHHTTCCCEEECCCGGGCCCS-CCEEEEEECTTG-G
T ss_pred CCCCeEEEeCCCCCHHHHHHHHCC-CcEEEEECCHHHHHHHHHHHhhcCCCeEEEecccccCCcc-CCceEEEEcCcc-c
Confidence 477899999999999999888876 68999999741 234568899999988 8999999997 8 9
Q ss_pred ecc---CChHHHHHHHHhcccCCcEEEEEecC
Q 010086 180 EKA---SKPLDFASEIVRTLKPEGFAVVHVRA 208 (518)
Q Consensus 180 ~~~---~dp~~~l~Ei~RVLKPGG~lvi~~~~ 208 (518)
+|+ .++..+++++.|+|||||++++.+..
T Consensus 113 ~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~ 144 (246)
T 1y8c_A 113 NYIIDSDDLKKYFKAVSNHLKEGGVFIFDINS 144 (246)
T ss_dssp GGCCSHHHHHHHHHHHHTTEEEEEEEEEEEEC
T ss_pred cccCCHHHHHHHHHHHHHhcCCCcEEEEEecC
Confidence 999 45678999999999999999987643
No 64
>2kw5_A SLR1183 protein; structural genomics, northeast structural genomics consortium (NESG), PSI-2, protein structure initiative, unknown function; NMR {Synechocystis} PDB: 3mer_A
Probab=99.35 E-value=2.9e-12 Score=119.93 Aligned_cols=114 Identities=14% Similarity=0.180 Sum_probs=87.1
Q ss_pred CCCCCeEEEEcCCCCHhHHHHHhcCCCcEEEEecCCC--------------CCcEEeccCCCCCCCCCceeEEEEcCcee
Q 010086 114 LSQSAKSLCVETQYGQDVFALKEIGVEDSIGIFKKSS--------------KPLVISGEGHRIPFDGNTFDFVFVGGARL 179 (518)
Q Consensus 114 l~~~~rvLDVGcGtG~~~~~L~~~g~~~v~gID~s~~--------------~~l~~~~da~~LPf~D~SFD~V~s~~~~l 179 (518)
++++ +|||||||+|..+..+++.| .+++|+|+++. ...++.+|..++|+++++||+|++..
T Consensus 28 ~~~~-~vLdiGcG~G~~~~~l~~~~-~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~--- 102 (202)
T 2kw5_A 28 IPQG-KILCLAEGEGRNACFLASLG-YEVTAVDQSSVGLAKAKQLAQEKGVKITTVQSNLADFDIVADAWEGIVSIF--- 102 (202)
T ss_dssp SCSS-EEEECCCSCTHHHHHHHTTT-CEEEEECSSHHHHHHHHHHHHHHTCCEEEECCBTTTBSCCTTTCSEEEEEC---
T ss_pred CCCC-CEEEECCCCCHhHHHHHhCC-CeEEEEECCHHHHHHHHHHHHhcCCceEEEEcChhhcCCCcCCccEEEEEh---
Confidence 4567 99999999999999888877 59999999741 12356789999999999999999954
Q ss_pred ecc--CChHHHHHHHHhcccCCcEEEEEecCCC--------------ccCchhHhhhccCccEEEEecc
Q 010086 180 EKA--SKPLDFASEIVRTLKPEGFAVVHVRAKD--------------EYSFNSFLDLFNSCKLVKSRDI 232 (518)
Q Consensus 180 ~~~--~dp~~~l~Ei~RVLKPGG~lvi~~~~~~--------------~~s~~~~~~lf~~~~~v~~~~v 232 (518)
.|. .++..+++++.|+|||||.+++.....+ .++...+..++..++++.+...
T Consensus 103 ~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~Gf~v~~~~~~ 171 (202)
T 2kw5_A 103 CHLPSSLRQQLYPKVYQGLKPGGVFILEGFAPEQLQYNTGGPKDLDLLPKLETLQSELPSLNWLIANNL 171 (202)
T ss_dssp CCCCHHHHHHHHHHHHTTCCSSEEEEEEEECTTTGGGTSCCSSSGGGCCCHHHHHHHCSSSCEEEEEEE
T ss_pred hcCCHHHHHHHHHHHHHhcCCCcEEEEEEeccccccCCCCCCCcceeecCHHHHHHHhcCceEEEEEEE
Confidence 343 3567899999999999999998753221 1344556667777777776543
No 65
>1kpg_A CFA synthase;, cyclopropane-fatty-acyl-phospholipid synthase 1; mixed alpha beta fold, structural genomics, PSI; HET: SAH 16A; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kp9_A* 1kph_A* 1tpy_A* 1l1e_A*
Probab=99.35 E-value=3.4e-12 Score=126.23 Aligned_cols=96 Identities=17% Similarity=0.173 Sum_probs=78.0
Q ss_pred HHHHHcCCCCCCCeEEEEcCCCCHhHHHHH-hcCCCcEEEEecCCC----------------CCcEEeccCCCCCCCCCc
Q 010086 106 QDLISEGYLSQSAKSLCVETQYGQDVFALK-EIGVEDSIGIFKKSS----------------KPLVISGEGHRIPFDGNT 168 (518)
Q Consensus 106 ~~L~~~gll~~~~rvLDVGcGtG~~~~~L~-~~g~~~v~gID~s~~----------------~~l~~~~da~~LPf~D~S 168 (518)
+.+.+...++++.+|||||||+|..+..++ +.| .+|+|+|+++. ...++.+|..++| ++
T Consensus 54 ~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~-~~v~gvd~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~---~~ 129 (287)
T 1kpg_A 54 DLALGKLGLQPGMTLLDVGCGWGATMMRAVEKYD-VNVVGLTLSKNQANHVQQLVANSENLRSKRVLLAGWEQFD---EP 129 (287)
T ss_dssp HHHHTTTTCCTTCEEEEETCTTSHHHHHHHHHHC-CEEEEEESCHHHHHHHHHHHHTCCCCSCEEEEESCGGGCC---CC
T ss_pred HHHHHHcCCCCcCEEEEECCcccHHHHHHHHHcC-CEEEEEECCHHHHHHHHHHHHhcCCCCCeEEEECChhhCC---CC
Confidence 334444446788999999999999998877 456 59999999741 1234578887776 89
Q ss_pred eeEEEEcCceeecc--CChHHHHHHHHhcccCCcEEEEEe
Q 010086 169 FDFVFVGGARLEKA--SKPLDFASEIVRTLKPEGFAVVHV 206 (518)
Q Consensus 169 FD~V~s~~~~l~~~--~dp~~~l~Ei~RVLKPGG~lvi~~ 206 (518)
||+|++..+ ++|+ .++..+++++.|+|||||++++..
T Consensus 130 fD~v~~~~~-l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 168 (287)
T 1kpg_A 130 VDRIVSIGA-FEHFGHERYDAFFSLAHRLLPADGVMLLHT 168 (287)
T ss_dssp CSEEEEESC-GGGTCTTTHHHHHHHHHHHSCTTCEEEEEE
T ss_pred eeEEEEeCc-hhhcChHHHHHHHHHHHHhcCCCCEEEEEE
Confidence 999999997 9999 678899999999999999999875
No 66
>2py6_A Methyltransferase FKBM; YP_546752.1, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; 2.15A {Methylobacillus flagellatus KT} SCOP: c.66.1.56
Probab=99.34 E-value=1.9e-12 Score=136.76 Aligned_cols=161 Identities=18% Similarity=0.163 Sum_probs=99.2
Q ss_pred cccCCcccccccCCceEEEEeCCCCCCcchhhhhh-hhCCCCCcceEEEEEcCCccchHhhc----c-----C-CceEEE
Q 010086 305 IKYLPSMADISFKNRYVYVDVGARSYGSSIGSWFK-KQYPKQNKTFDVYAIEADKTFHEEYK----V-----K-KKVKLL 373 (518)
Q Consensus 305 ~~ylp~~~d~s~~~r~V~iD~GAn~~g~sv~~~F~-~~YP~~~~~f~V~afE~np~~~~~~~----~-----~-~~V~~~ 373 (518)
..|+..-+ +.++++.++|||||| +|. .+.+|. +..|.. -+||||||+|...+.+. . . ++|+++
T Consensus 214 ~~Y~~~~i-~~l~~~~~viDvGAn-~G~-~s~~~a~~~~~~~---~~V~afEP~p~~~~~L~~n~~~~~N~~~~~~v~~~ 287 (409)
T 2py6_A 214 TLYFRSGL-LRFSDSEKMVDCGAS-IGE-SLAGLIGVTKGKF---ERVWMIEPDRINLQTLQNVLRRYTDTNFASRITVH 287 (409)
T ss_dssp GTTTSSSS-CCCCSSCEEEEETCT-TSH-HHHHHHHHHTSCC---SEEEEECCCHHHHHHHHHHHHHTTTSTTGGGEEEE
T ss_pred hhhccccc-cccCCCCEEEECCCC-cCH-HHHHHHHHhcCCC---CEEEEEcCCHHHHHHHHHHHHhhhccCCCCCEEEE
Confidence 45654321 135789999999999 696 445776 566631 27999999998755432 2 4 899999
Q ss_pred eeceeecCCceEEEecCCCCcchhhcccCCccccccccCCCCCCCCCcceeecccHHHHHhhcCCCCCeEEEEeeccchh
Q 010086 374 PYAAWVRNETLSFQINHDPDKEVVVKGRGMGRIQPVQSLSDGGFDGEVDRIQGFDFADWLKNTVTDKDFVVMKMDVEGTE 453 (518)
Q Consensus 374 ~~Av~~~~~tl~f~~~~~~~~~~~~~~~g~~~i~p~~~~~~~~~~g~~~~v~~vd~s~wl~~~v~~~D~VVlKMDIEGaE 453 (518)
+.|+|.++|++.|...... ++++.+... ......+|+.+.+.++ .....| +|||||||+|
T Consensus 288 ~~al~~~~g~~~f~~~~~~----------~s~l~~~~~-----~~~~~~~V~~~tLD~~---~~~~id--~lKiDvEG~E 347 (409)
T 2py6_A 288 GCGAGENTIRVPFNHEGGH----------GGFVKPADA-----DHEPADLIDVRPIDDI---IDDAPT--FIKMDIEGSE 347 (409)
T ss_dssp CSEECSSCEEEEC-----------------------------------CEEEEECHHHH---CSSCCS--EEEECCSSCH
T ss_pred EeEEECCCCEEEEEeCCCC----------CccccCCcc-----cCCCceEEEEEEhhhc---CCCCCC--EEEEcCCCCh
Confidence 9999999999988543221 233433211 0123467888999888 223445 6999999999
Q ss_pred hhhHHHHHhcCCcccc-cEEEEEeecccccccCCCCCCCcccccHHHHHHHHHHH
Q 010086 454 FDLIPRLFETGAICLI-DEIFLECHYNRWQRCCPGQRSPKYKKTYEQCLELFTSL 507 (518)
Q Consensus 454 ~~vL~~l~~~g~i~~I-DeLfvE~H~~~~~~~~~g~~~~~~~~~~~~cl~L~~~L 507 (518)
+++|+.+.+ ++... -.+.+|++.. . ...++..+++.+|
T Consensus 348 ~~VL~G~~~--~l~~~~P~l~ie~~h~--------~------~~~~~i~~~L~~~ 386 (409)
T 2py6_A 348 LSALKGARR--AISEHKPKLAISAYHR--------S------TDLLDLTNYILSI 386 (409)
T ss_dssp HHHHHTTHH--HHHHHCCEEEEECCSS--------T------THHHHHHHHHHHH
T ss_pred HHHHHHHHH--HHHHcCCEEEEEEecC--------c------hhHHHHHHHHHHh
Confidence 999998632 33221 2366776321 1 2346777777776
No 67
>1zx0_A Guanidinoacetate N-methyltransferase; structural genomics, structural genomics consortium; HET: SAH; 1.86A {Homo sapiens} PDB: 3orh_A* 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=99.34 E-value=6.3e-13 Score=128.35 Aligned_cols=90 Identities=16% Similarity=0.127 Sum_probs=71.6
Q ss_pred CCCCCeEEEEcCCCCHhHHHHHhcCCCcEEEEecCCC------------C--CcEEeccCCCC--CCCCCceeEEEE-cC
Q 010086 114 LSQSAKSLCVETQYGQDVFALKEIGVEDSIGIFKKSS------------K--PLVISGEGHRI--PFDGNTFDFVFV-GG 176 (518)
Q Consensus 114 l~~~~rvLDVGcGtG~~~~~L~~~g~~~v~gID~s~~------------~--~l~~~~da~~L--Pf~D~SFD~V~s-~~ 176 (518)
.+++.+|||||||+|..+..+++.+..+++|+|+|+. . ..++.+|++++ ||++++||+|++ ..
T Consensus 58 ~~~~~~vLDiGcGtG~~~~~l~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~v~~~~~d~~~~~~~~~~~~fD~V~~d~~ 137 (236)
T 1zx0_A 58 SSKGGRVLEVGFGMAIAASKVQEAPIDEHWIIECNDGVFQRLRDWAPRQTHKVIPLKGLWEDVAPTLPDGHFDGILYDTY 137 (236)
T ss_dssp TTTCEEEEEECCTTSHHHHHHHTSCEEEEEEEECCHHHHHHHHHHGGGCSSEEEEEESCHHHHGGGSCTTCEEEEEECCC
T ss_pred CCCCCeEEEEeccCCHHHHHHHhcCCCeEEEEcCCHHHHHHHHHHHHhcCCCeEEEecCHHHhhcccCCCceEEEEECCc
Confidence 4678899999999999999998766569999999841 1 23467888888 999999999999 44
Q ss_pred ceeeccC-----ChHHHHHHHHhcccCCcEEEEE
Q 010086 177 ARLEKAS-----KPLDFASEIVRTLKPEGFAVVH 205 (518)
Q Consensus 177 ~~l~~~~-----dp~~~l~Ei~RVLKPGG~lvi~ 205 (518)
. + +.. ++..+++|+.|+|||||++++.
T Consensus 138 ~-~-~~~~~~~~~~~~~l~~~~r~LkpgG~l~~~ 169 (236)
T 1zx0_A 138 P-L-SEETWHTHQFNFIKNHAFRLLKPGGVLTYC 169 (236)
T ss_dssp C-C-BGGGTTTHHHHHHHHTHHHHEEEEEEEEEC
T ss_pred c-c-chhhhhhhhHHHHHHHHHHhcCCCeEEEEE
Confidence 3 3 222 2346799999999999998875
No 68
>1ve3_A Hypothetical protein PH0226; dimer, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function, NPPSFA; HET: SAM; 2.10A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=99.33 E-value=4.4e-12 Score=120.23 Aligned_cols=93 Identities=23% Similarity=0.338 Sum_probs=76.7
Q ss_pred CCCCCeEEEEcCCCCHhHHHHHhcCCCcEEEEecCC--------------CCCcEEeccCCCCCCCCCceeEEEEcCc-e
Q 010086 114 LSQSAKSLCVETQYGQDVFALKEIGVEDSIGIFKKS--------------SKPLVISGEGHRIPFDGNTFDFVFVGGA-R 178 (518)
Q Consensus 114 l~~~~rvLDVGcGtG~~~~~L~~~g~~~v~gID~s~--------------~~~l~~~~da~~LPf~D~SFD~V~s~~~-~ 178 (518)
++++.+|||||||+|..+..+.+.+ .+++|+|+++ ....++.+|..++|+++++||+|++..+ .
T Consensus 36 ~~~~~~vLDlG~G~G~~~~~l~~~~-~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~~~~~~ 114 (227)
T 1ve3_A 36 MKKRGKVLDLACGVGGFSFLLEDYG-FEVVGVDISEDMIRKAREYAKSRESNVEFIVGDARKLSFEDKTFDYVIFIDSIV 114 (227)
T ss_dssp CCSCCEEEEETCTTSHHHHHHHHTT-CEEEEEESCHHHHHHHHHHHHHTTCCCEEEECCTTSCCSCTTCEEEEEEESCGG
T ss_pred cCCCCeEEEEeccCCHHHHHHHHcC-CEEEEEECCHHHHHHHHHHHHhcCCCceEEECchhcCCCCCCcEEEEEEcCchH
Confidence 4568899999999999998888877 4999999974 1234678999999999999999999875 1
Q ss_pred eeccCChHHHHHHHHhcccCCcEEEEEec
Q 010086 179 LEKASKPLDFASEIVRTLKPEGFAVVHVR 207 (518)
Q Consensus 179 l~~~~dp~~~l~Ei~RVLKPGG~lvi~~~ 207 (518)
++|..++..+++++.|+|||||++++...
T Consensus 115 ~~~~~~~~~~l~~~~~~L~~gG~l~~~~~ 143 (227)
T 1ve3_A 115 HFEPLELNQVFKEVRRVLKPSGKFIMYFT 143 (227)
T ss_dssp GCCHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred hCCHHHHHHHHHHHHHHcCCCcEEEEEec
Confidence 33444677899999999999999988753
No 69
>3ocj_A Putative exported protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: PLM; 1.39A {Bordetella parapertussis}
Probab=99.33 E-value=3.6e-12 Score=128.03 Aligned_cols=91 Identities=14% Similarity=0.156 Sum_probs=77.3
Q ss_pred CCCCCeEEEEcCCCCHhHHHHH--hcCCCcEEEEecCCC--------------C--CcEEeccCCCCCCCCCceeEEEEc
Q 010086 114 LSQSAKSLCVETQYGQDVFALK--EIGVEDSIGIFKKSS--------------K--PLVISGEGHRIPFDGNTFDFVFVG 175 (518)
Q Consensus 114 l~~~~rvLDVGcGtG~~~~~L~--~~g~~~v~gID~s~~--------------~--~l~~~~da~~LPf~D~SFD~V~s~ 175 (518)
++++.+|||||||+|..+..++ ..+..+++|+|+++. . ..++.+|+.++|++ ++||+|++.
T Consensus 116 l~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~-~~fD~v~~~ 194 (305)
T 3ocj_A 116 LRPGCVVASVPCGWMSELLALDYSACPGVQLVGIDYDPEALDGATRLAAGHALAGQITLHRQDAWKLDTR-EGYDLLTSN 194 (305)
T ss_dssp CCTTCEEEETTCTTCHHHHTSCCTTCTTCEEEEEESCHHHHHHHHHHHTTSTTGGGEEEEECCGGGCCCC-SCEEEEECC
T ss_pred CCCCCEEEEecCCCCHHHHHHHHhcCCCCeEEEEECCHHHHHHHHHHHHhcCCCCceEEEECchhcCCcc-CCeEEEEEC
Confidence 5788999999999999998873 333469999999741 1 23578999999998 999999998
Q ss_pred CceeeccCChHH---HHHHHHhcccCCcEEEEEe
Q 010086 176 GARLEKASKPLD---FASEIVRTLKPEGFAVVHV 206 (518)
Q Consensus 176 ~~~l~~~~dp~~---~l~Ei~RVLKPGG~lvi~~ 206 (518)
.+ ++|++++.. +++++.|+|||||++++..
T Consensus 195 ~~-~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~ 227 (305)
T 3ocj_A 195 GL-NIYEPDDARVTELYRRFWQALKPGGALVTSF 227 (305)
T ss_dssp SS-GGGCCCHHHHHHHHHHHHHHEEEEEEEEEEC
T ss_pred Ch-hhhcCCHHHHHHHHHHHHHhcCCCeEEEEEe
Confidence 87 999998876 6999999999999999875
No 70
>3bxo_A N,N-dimethyltransferase; desosamine, sugar, carbohydrate, antibiotic, SAM, adoMet; HET: SAM UPP; 2.00A {Streptomyces venezuelae}
Probab=99.33 E-value=3.7e-12 Score=121.67 Aligned_cols=107 Identities=14% Similarity=0.159 Sum_probs=82.3
Q ss_pred hhHHHHHhhHHHHHHHHHHcCCCCCCCeEEEEcCCCCHhHHHHHhcCCCcEEEEecCCC----------CCcEEeccCCC
Q 010086 92 KEWIKAVNFYSSVFQDLISEGYLSQSAKSLCVETQYGQDVFALKEIGVEDSIGIFKKSS----------KPLVISGEGHR 161 (518)
Q Consensus 92 ~~wr~~v~~~~~l~~~L~~~gll~~~~rvLDVGcGtG~~~~~L~~~g~~~v~gID~s~~----------~~l~~~~da~~ 161 (518)
..|+...+.+..++..+ +.++.+|||||||+|..+..+.+.+ .+++|+|+++. ...++.+|..+
T Consensus 21 ~~~~~~~~~~~~~l~~~-----~~~~~~vLdiG~G~G~~~~~l~~~~-~~v~~~D~s~~~~~~a~~~~~~~~~~~~d~~~ 94 (239)
T 3bxo_A 21 KDYAAEASDIADLVRSR-----TPEASSLLDVACGTGTHLEHFTKEF-GDTAGLELSEDMLTHARKRLPDATLHQGDMRD 94 (239)
T ss_dssp CCHHHHHHHHHHHHHHH-----CTTCCEEEEETCTTSHHHHHHHHHH-SEEEEEESCHHHHHHHHHHCTTCEEEECCTTT
T ss_pred hhHHHHHHHHHHHHHHh-----cCCCCeEEEecccCCHHHHHHHHhC-CcEEEEeCCHHHHHHHHHhCCCCEEEECCHHH
Confidence 34555544444443322 2678899999999999998888776 48999999741 23467889999
Q ss_pred CCCCCCceeEEEEcC-ceeeccCCh---HHHHHHHHhcccCCcEEEEEe
Q 010086 162 IPFDGNTFDFVFVGG-ARLEKASKP---LDFASEIVRTLKPEGFAVVHV 206 (518)
Q Consensus 162 LPf~D~SFD~V~s~~-~~l~~~~dp---~~~l~Ei~RVLKPGG~lvi~~ 206 (518)
+|+ +++||+|+|.. + ++|+.++ ..+++++.|+|||||.+++..
T Consensus 95 ~~~-~~~~D~v~~~~~~-~~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~ 141 (239)
T 3bxo_A 95 FRL-GRKFSAVVSMFSS-VGYLKTTEELGAAVASFAEHLEPGGVVVVEP 141 (239)
T ss_dssp CCC-SSCEEEEEECTTG-GGGCCSHHHHHHHHHHHHHTEEEEEEEEECC
T ss_pred ccc-CCCCcEEEEcCch-HhhcCCHHHHHHHHHHHHHhcCCCeEEEEEe
Confidence 988 78999999655 5 8998554 578999999999999999874
No 71
>1vlm_A SAM-dependent methyltransferase; possible histamine methyltransferase, structural genomics, JCSG, protein struc initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.66.1.41
Probab=99.32 E-value=4.8e-12 Score=120.58 Aligned_cols=87 Identities=21% Similarity=0.352 Sum_probs=75.6
Q ss_pred CCCeEEEEcCCCCHhHHHHHhcCCCcEEEEecCCC--------CCcEEeccCCCCCCCCCceeEEEEcCceeeccCChHH
Q 010086 116 QSAKSLCVETQYGQDVFALKEIGVEDSIGIFKKSS--------KPLVISGEGHRIPFDGNTFDFVFVGGARLEKASKPLD 187 (518)
Q Consensus 116 ~~~rvLDVGcGtG~~~~~L~~~g~~~v~gID~s~~--------~~l~~~~da~~LPf~D~SFD~V~s~~~~l~~~~dp~~ 187 (518)
++.+|||||||+|..+..+.+. +|+|+++. ...++.+|..++|+++++||+|++..+ ++|++++..
T Consensus 47 ~~~~vLDiG~G~G~~~~~l~~~-----~~vD~s~~~~~~a~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~-l~~~~~~~~ 120 (219)
T 1vlm_A 47 PEGRGVEIGVGTGRFAVPLKIK-----IGVEPSERMAEIARKRGVFVLKGTAENLPLKDESFDFALMVTT-ICFVDDPER 120 (219)
T ss_dssp CSSCEEEETCTTSTTHHHHTCC-----EEEESCHHHHHHHHHTTCEEEECBTTBCCSCTTCEEEEEEESC-GGGSSCHHH
T ss_pred CCCcEEEeCCCCCHHHHHHHHH-----hccCCCHHHHHHHHhcCCEEEEcccccCCCCCCCeeEEEEcch-HhhccCHHH
Confidence 3889999999999999877543 99998742 234678899999999999999999997 999999999
Q ss_pred HHHHHHhcccCCcEEEEEecC
Q 010086 188 FASEIVRTLKPEGFAVVHVRA 208 (518)
Q Consensus 188 ~l~Ei~RVLKPGG~lvi~~~~ 208 (518)
+++++.|+|||||.+++....
T Consensus 121 ~l~~~~~~L~pgG~l~i~~~~ 141 (219)
T 1vlm_A 121 ALKEAYRILKKGGYLIVGIVD 141 (219)
T ss_dssp HHHHHHHHEEEEEEEEEEEEC
T ss_pred HHHHHHHHcCCCcEEEEEEeC
Confidence 999999999999999997643
No 72
>2vdw_A Vaccinia virus capping enzyme D1 subunit; nucleotidyltransferase, S-adenosyl-L-methionine, RNA metabolism, mRNA processing, methyltransferase, poxvirus; HET: SAH; 2.70A {Vaccinia virus}
Probab=99.32 E-value=1.9e-12 Score=131.22 Aligned_cols=93 Identities=11% Similarity=0.026 Sum_probs=70.5
Q ss_pred CCCCeEEEEcCCCCHhHHHHHhcCCCcEEEEecCCC------------CC---------cEEeccC------CCC--CCC
Q 010086 115 SQSAKSLCVETQYGQDVFALKEIGVEDSIGIFKKSS------------KP---------LVISGEG------HRI--PFD 165 (518)
Q Consensus 115 ~~~~rvLDVGcGtG~~~~~L~~~g~~~v~gID~s~~------------~~---------l~~~~da------~~L--Pf~ 165 (518)
+++.+|||||||+|..+..+...+..+|+|||+|+. .. .+..++. ++| +++
T Consensus 47 ~~~~~VLDlGCG~G~~l~~~~~~~~~~v~GiD~S~~~l~~A~~~~~~~~~~~~~~~~~~~f~~~d~~~d~~~~~l~~~~~ 126 (302)
T 2vdw_A 47 SNKRKVLAIDFGNGADLEKYFYGEIALLVATDPDADAIARGNERYNKLNSGIKTKYYKFDYIQETIRSDTFVSSVREVFY 126 (302)
T ss_dssp CSCCEEEETTCTTTTTHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHCC----CCCEEEEEECCTTSSSHHHHHHTTCC
T ss_pred CCCCeEEEEecCCcHhHHHHHhcCCCeEEEEECCHHHHHHHHHHHHhccccccccccccchhhhhcccchhhhhhhcccc
Confidence 357899999999998776555555579999999841 10 1223443 333 578
Q ss_pred CCceeEEEEcCceeecc---CChHHHHHHHHhcccCCcEEEEEecC
Q 010086 166 GNTFDFVFVGGARLEKA---SKPLDFASEIVRTLKPEGFAVVHVRA 208 (518)
Q Consensus 166 D~SFD~V~s~~~~l~~~---~dp~~~l~Ei~RVLKPGG~lvi~~~~ 208 (518)
+++||+|+|..+ +|++ .+...++++++|+|||||++++.+..
T Consensus 127 ~~~FD~V~~~~~-lhy~~~~~~~~~~l~~~~r~LkpGG~~i~~~~~ 171 (302)
T 2vdw_A 127 FGKFNIIDWQFA-IHYSFHPRHYATVMNNLSELTASGGKVLITTMD 171 (302)
T ss_dssp SSCEEEEEEESC-GGGTCSTTTHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred CCCeeEEEECch-HHHhCCHHHHHHHHHHHHHHcCCCCEEEEEeCC
Confidence 899999999987 8875 34578999999999999999987753
No 73
>2plw_A Ribosomal RNA methyltransferase, putative; malaria, SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Plasmodium falciparum}
Probab=99.31 E-value=5.9e-12 Score=117.68 Aligned_cols=96 Identities=18% Similarity=0.150 Sum_probs=75.5
Q ss_pred CCCCCCCeEEEEcCCCCHhHHHHHhc-C--CCcEEEEecCCCC----CcEEeccCCCCC---------------------
Q 010086 112 GYLSQSAKSLCVETQYGQDVFALKEI-G--VEDSIGIFKKSSK----PLVISGEGHRIP--------------------- 163 (518)
Q Consensus 112 gll~~~~rvLDVGcGtG~~~~~L~~~-g--~~~v~gID~s~~~----~l~~~~da~~LP--------------------- 163 (518)
++++++.+|||||||+|..+..+++. + ..+|+|+|+++.. ..++++|..+++
T Consensus 18 ~~~~~~~~vLDlGcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~~~~~v~~~~~d~~~~~~~~~~~~~~i~~~~~~~~~~~ 97 (201)
T 2plw_A 18 LFLKKNKIILDIGCYPGSWCQVILERTKNYKNKIIGIDKKIMDPIPNVYFIQGEIGKDNMNNIKNINYIDNMNNNSVDYK 97 (201)
T ss_dssp CCCCTTEEEEEESCTTCHHHHHHHHHTTTSCEEEEEEESSCCCCCTTCEEEECCTTTTSSCCC-----------CHHHHH
T ss_pred CCCCCCCEEEEeCCCCCHHHHHHHHHcCCCCceEEEEeCCccCCCCCceEEEccccchhhhhhccccccccccchhhHHH
Confidence 55788999999999999999888764 3 3689999998742 235688888887
Q ss_pred ----CCCCceeEEEEcCceeecc----CChH-------HHHHHHHhcccCCcEEEEEecC
Q 010086 164 ----FDGNTFDFVFVGGARLEKA----SKPL-------DFASEIVRTLKPEGFAVVHVRA 208 (518)
Q Consensus 164 ----f~D~SFD~V~s~~~~l~~~----~dp~-------~~l~Ei~RVLKPGG~lvi~~~~ 208 (518)
+++++||+|++..+ +++. .+.. .+++++.|+|||||.+++.+..
T Consensus 98 ~~~~~~~~~fD~v~~~~~-~~~~g~~~~d~~~~~~~~~~~l~~~~~~LkpgG~lv~~~~~ 156 (201)
T 2plw_A 98 LKEILQDKKIDIILSDAA-VPCIGNKIDDHLNSCELTLSITHFMEQYINIGGTYIVKMYL 156 (201)
T ss_dssp HHHHHTTCCEEEEEECCC-CCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred HHhhcCCCcccEEEeCCC-cCCCCCcccCHHHHHHHHHHHHHHHHHHccCCCEEEEEEeC
Confidence 78899999999875 5553 2222 3789999999999999987644
No 74
>3bkx_A SAM-dependent methyltransferase; YP_807781.1, cyclopropane-fatty-acyl-phospholipid synthase-L protein, methyltransferase domain; 1.85A {Lactobacillus casei}
Probab=99.31 E-value=5.7e-12 Score=123.48 Aligned_cols=94 Identities=17% Similarity=0.047 Sum_probs=76.0
Q ss_pred CCCCCCeEEEEcCCCCHhHHHHHhc-CC-CcEEEEecCCC----------------------CCcEEecc---CCCCCCC
Q 010086 113 YLSQSAKSLCVETQYGQDVFALKEI-GV-EDSIGIFKKSS----------------------KPLVISGE---GHRIPFD 165 (518)
Q Consensus 113 ll~~~~rvLDVGcGtG~~~~~L~~~-g~-~~v~gID~s~~----------------------~~l~~~~d---a~~LPf~ 165 (518)
.++++.+|||||||+|..+..+++. |. .+++|+|+++. ...++.+| ...+||+
T Consensus 40 ~~~~~~~vLDiGcG~G~~~~~l~~~~g~~~~v~gvD~s~~~~~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~ 119 (275)
T 3bkx_A 40 QVKPGEKILEIGCGQGDLSAVLADQVGSSGHVTGIDIASPDYGAPLTLGQAWNHLLAGPLGDRLTVHFNTNLSDDLGPIA 119 (275)
T ss_dssp TCCTTCEEEEESCTTSHHHHHHHHHHCTTCEEEEECSSCTTCCSSSCHHHHHHHHHTSTTGGGEEEECSCCTTTCCGGGT
T ss_pred CCCCCCEEEEeCCCCCHHHHHHHHHhCCCCEEEEEECCccccccHHHHHHHHHHHHhcCCCCceEEEECChhhhccCCCC
Confidence 4678899999999999999888775 43 69999999863 01234666 6678899
Q ss_pred CCceeEEEEcCceeeccCChHHHHHHHHhcccCCcEEEEEec
Q 010086 166 GNTFDFVFVGGARLEKASKPLDFASEIVRTLKPEGFAVVHVR 207 (518)
Q Consensus 166 D~SFD~V~s~~~~l~~~~dp~~~l~Ei~RVLKPGG~lvi~~~ 207 (518)
+++||+|++..+ ++|+.++..+++.+.++++|||++++...
T Consensus 120 ~~~fD~v~~~~~-l~~~~~~~~~~~~~~~l~~~gG~l~~~~~ 160 (275)
T 3bkx_A 120 DQHFDRVVLAHS-LWYFASANALALLFKNMAAVCDHVDVAEW 160 (275)
T ss_dssp TCCCSEEEEESC-GGGSSCHHHHHHHHHHHTTTCSEEEEEEE
T ss_pred CCCEEEEEEccc-hhhCCCHHHHHHHHHHHhCCCCEEEEEEe
Confidence 999999999998 99999998877777777777999988743
No 75
>2i62_A Nicotinamide N-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAH; 1.80A {Mus musculus} PDB: 2iip_A* 3rod_A*
Probab=99.31 E-value=3.8e-12 Score=123.53 Aligned_cols=102 Identities=12% Similarity=0.025 Sum_probs=79.6
Q ss_pred HHHHHHHHcCCCCCCCeEEEEcCCCCHhHHHHHhcCCCcEEEEecCCC-----------C--------------------
Q 010086 103 SVFQDLISEGYLSQSAKSLCVETQYGQDVFALKEIGVEDSIGIFKKSS-----------K-------------------- 151 (518)
Q Consensus 103 ~l~~~L~~~gll~~~~rvLDVGcGtG~~~~~L~~~g~~~v~gID~s~~-----------~-------------------- 151 (518)
..+..+... ...++.+|||||||+|..+..+++.+..+|+|+|+++. .
T Consensus 44 ~~l~~~~~~-~~~~~~~vLDlGcG~G~~~~~l~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~ 122 (265)
T 2i62_A 44 KNLFKIFCL-GAVKGELLIDIGSGPTIYQLLSACESFTEIIVSDYTDQNLWELQKWLKKEPGAFDWSPVVTYVCDLEGNR 122 (265)
T ss_dssp HHHHHHHHS-SSCCEEEEEEESCTTCCGGGTTGGGTEEEEEEEESCHHHHHHHHHHHTTCTTCCCCHHHHHHHHHHTTTC
T ss_pred HHHHHHhcc-cccCCCEEEEECCCccHHHHHHhhcccCeEEEecCCHHHHHHHHHHHhcCCccccchhhhhhhhcccccc
Confidence 344455544 33567899999999999988887776459999999741 1
Q ss_pred -------------C-cEEeccCCCC-CCCC---CceeEEEEcCceee----ccCChHHHHHHHHhcccCCcEEEEEe
Q 010086 152 -------------P-LVISGEGHRI-PFDG---NTFDFVFVGGARLE----KASKPLDFASEIVRTLKPEGFAVVHV 206 (518)
Q Consensus 152 -------------~-l~~~~da~~L-Pf~D---~SFD~V~s~~~~l~----~~~dp~~~l~Ei~RVLKPGG~lvi~~ 206 (518)
. .+..+|..++ |+++ ++||+|++..+ ++ +..++..+++++.|+|||||++++..
T Consensus 123 ~~~~~~~~~l~~~v~~~~~~d~~~~~~~~~~~~~~fD~v~~~~~-l~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~ 198 (265)
T 2i62_A 123 MKGPEKEEKLRRAIKQVLKCDVTQSQPLGGVSLPPADCLLSTLC-LDAACPDLPAYRTALRNLGSLLKPGGFLVMVD 198 (265)
T ss_dssp SCHHHHHHHHHHHEEEEEECCTTSSSTTTTCCCCCEEEEEEESC-HHHHCSSHHHHHHHHHHHHTTEEEEEEEEEEE
T ss_pred cchHHHHHHhhhhheeEEEeeeccCCCCCccccCCccEEEEhhh-hhhhcCChHHHHHHHHHHHhhCCCCcEEEEEe
Confidence 2 4567888776 4467 99999999997 88 55577899999999999999998875
No 76
>3ggd_A SAM-dependent methyltransferase; YP_325210.1, structural GEN joint center for structural genomics, JCSG; HET: SAH; 2.11A {Anabaena variabilis atcc 29413}
Probab=99.30 E-value=1.2e-12 Score=126.39 Aligned_cols=113 Identities=9% Similarity=-0.067 Sum_probs=83.9
Q ss_pred hhccCChhHHHHHhhHHHHHHHHHHcCCCCCCCeEEEEcCCCCHhHHHHHhcCCCcEEEEecCCC------------CCc
Q 010086 86 RDMYTSKEWIKAVNFYSSVFQDLISEGYLSQSAKSLCVETQYGQDVFALKEIGVEDSIGIFKKSS------------KPL 153 (518)
Q Consensus 86 ~~~w~s~~wr~~v~~~~~l~~~L~~~gll~~~~rvLDVGcGtG~~~~~L~~~g~~~v~gID~s~~------------~~l 153 (518)
..+|+...|+.....+..+ . ..++++.+|||||||+|..+..|++.+. +|+|+|+++. ...
T Consensus 32 ~~~~~~~~~~~~~~~~~~~----~--~~~~~~~~vLD~GcG~G~~~~~la~~~~-~v~gvD~s~~~~~~a~~~~~~~~~~ 104 (245)
T 3ggd_A 32 PVLWDANVERAVVVDLPRF----E--LLFNPELPLIDFACGNGTQTKFLSQFFP-RVIGLDVSKSALEIAAKENTAANIS 104 (245)
T ss_dssp CCTTCCCGGGTHHHHHHHH----T--TTSCTTSCEEEETCTTSHHHHHHHHHSS-CEEEEESCHHHHHHHHHHSCCTTEE
T ss_pred cceecchhHHHHHHHHHHH----h--hccCCCCeEEEEcCCCCHHHHHHHHhCC-CEEEEECCHHHHHHHHHhCcccCce
Confidence 3455555555443333222 2 1257889999999999999999988774 9999999841 123
Q ss_pred EEeccCCCCCCCC-----CceeEEEEcCceeeccC--ChHHHHHHHHhcccCCcEEEEEe
Q 010086 154 VISGEGHRIPFDG-----NTFDFVFVGGARLEKAS--KPLDFASEIVRTLKPEGFAVVHV 206 (518)
Q Consensus 154 ~~~~da~~LPf~D-----~SFD~V~s~~~~l~~~~--dp~~~l~Ei~RVLKPGG~lvi~~ 206 (518)
++++|..++++++ .+||+|++..+ ++|++ ++..+++++.|+|||||++++..
T Consensus 105 ~~~~d~~~~~~~~~~~~~~~~d~v~~~~~-~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~ 163 (245)
T 3ggd_A 105 YRLLDGLVPEQAAQIHSEIGDANIYMRTG-FHHIPVEKRELLGQSLRILLGKQGAMYLIE 163 (245)
T ss_dssp EEECCTTCHHHHHHHHHHHCSCEEEEESS-STTSCGGGHHHHHHHHHHHHTTTCEEEEEE
T ss_pred EEECcccccccccccccccCccEEEEcch-hhcCCHHHHHHHHHHHHHHcCCCCEEEEEe
Confidence 5678888866543 34999999987 99998 67899999999999999977763
No 77
>3bgv_A MRNA CAP guanine-N7 methyltransferase; alternative splicing, mRNA capping, mRNA processing, nucleus, phosphoprotein, RNA-binding; HET: SAH; 2.30A {Homo sapiens} PDB: 3epp_A*
Probab=99.30 E-value=5.4e-12 Score=127.01 Aligned_cols=93 Identities=12% Similarity=0.101 Sum_probs=75.0
Q ss_pred CCCCeEEEEcCCCCHhHHHHHhcCCCcEEEEecCCC----------------------CCcEEeccCCCCC----CC--C
Q 010086 115 SQSAKSLCVETQYGQDVFALKEIGVEDSIGIFKKSS----------------------KPLVISGEGHRIP----FD--G 166 (518)
Q Consensus 115 ~~~~rvLDVGcGtG~~~~~L~~~g~~~v~gID~s~~----------------------~~l~~~~da~~LP----f~--D 166 (518)
+++.+|||||||+|..+..+.+.+..+++|+|+++. ...++.+|++++| |+ +
T Consensus 33 ~~~~~VLDlGcG~G~~~~~l~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~ 112 (313)
T 3bgv_A 33 KRDITVLDLGCGKGGDLLKWKKGRINKLVCTDIADVSVKQCQQRYEDMKNRRDSEYIFSAEFITADSSKELLIDKFRDPQ 112 (313)
T ss_dssp --CCEEEEETCTTTTTHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHHSSSCC-CCCEEEEEECCTTTSCSTTTCSSTT
T ss_pred CCCCEEEEECCCCcHHHHHHHhcCCCEEEEEeCCHHHHHHHHHHHHHhhhcccccccceEEEEEecccccchhhhcccCC
Confidence 577899999999999998888765579999999741 1235688998886 75 4
Q ss_pred CceeEEEEcCceeecc-CC---hHHHHHHHHhcccCCcEEEEEecC
Q 010086 167 NTFDFVFVGGARLEKA-SK---PLDFASEIVRTLKPEGFAVVHVRA 208 (518)
Q Consensus 167 ~SFD~V~s~~~~l~~~-~d---p~~~l~Ei~RVLKPGG~lvi~~~~ 208 (518)
++||+|+|..+ +||+ .+ +..+++++.|+|||||.+++.+..
T Consensus 113 ~~fD~V~~~~~-l~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~~~ 157 (313)
T 3bgv_A 113 MCFDICSCQFV-CHYSFESYEQADMMLRNACERLSPGGYFIGTTPN 157 (313)
T ss_dssp CCEEEEEEETC-GGGGGGSHHHHHHHHHHHHTTEEEEEEEEEEEEC
T ss_pred CCEEEEEEecc-hhhccCCHHHHHHHHHHHHHHhCCCcEEEEecCC
Confidence 59999999997 9887 33 468999999999999999998653
No 78
>2fk8_A Methoxy mycolic acid synthase 4; S-adenosylmethionine-dependent methyltransferase fold, trans; HET: SAM; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 2fk7_A* 3ha3_A* 3ha5_A* 3ha7_A*
Probab=99.29 E-value=9.2e-12 Score=125.27 Aligned_cols=99 Identities=14% Similarity=0.090 Sum_probs=79.9
Q ss_pred HHHHHHHcCCCCCCCeEEEEcCCCCHhHHHHHhc-CCCcEEEEecCCC----------------CCcEEeccCCCCCCCC
Q 010086 104 VFQDLISEGYLSQSAKSLCVETQYGQDVFALKEI-GVEDSIGIFKKSS----------------KPLVISGEGHRIPFDG 166 (518)
Q Consensus 104 l~~~L~~~gll~~~~rvLDVGcGtG~~~~~L~~~-g~~~v~gID~s~~----------------~~l~~~~da~~LPf~D 166 (518)
.++.+++...++++.+|||||||+|..+..+++. | .+|+|+|+++. ...++.+|..++|
T Consensus 78 ~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~la~~~~-~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~--- 153 (318)
T 2fk8_A 78 KVDLNLDKLDLKPGMTLLDIGCGWGTTMRRAVERFD-VNVIGLTLSKNQHARCEQVLASIDTNRSRQVLLQGWEDFA--- 153 (318)
T ss_dssp HHHHHHTTSCCCTTCEEEEESCTTSHHHHHHHHHHC-CEEEEEESCHHHHHHHHHHHHTSCCSSCEEEEESCGGGCC---
T ss_pred HHHHHHHhcCCCCcCEEEEEcccchHHHHHHHHHCC-CEEEEEECCHHHHHHHHHHHHhcCCCCceEEEECChHHCC---
Confidence 3344455445678899999999999999888765 6 59999999741 1234578888775
Q ss_pred CceeEEEEcCceeecc--CChHHHHHHHHhcccCCcEEEEEec
Q 010086 167 NTFDFVFVGGARLEKA--SKPLDFASEIVRTLKPEGFAVVHVR 207 (518)
Q Consensus 167 ~SFD~V~s~~~~l~~~--~dp~~~l~Ei~RVLKPGG~lvi~~~ 207 (518)
++||+|++..+ ++|+ .++..+++++.|+|||||++++...
T Consensus 154 ~~fD~v~~~~~-l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 195 (318)
T 2fk8_A 154 EPVDRIVSIEA-FEHFGHENYDDFFKRCFNIMPADGRMTVQSS 195 (318)
T ss_dssp CCCSEEEEESC-GGGTCGGGHHHHHHHHHHHSCTTCEEEEEEE
T ss_pred CCcCEEEEeCh-HHhcCHHHHHHHHHHHHHhcCCCcEEEEEEe
Confidence 89999999998 9999 5788999999999999999998753
No 79
>3d2l_A SAM-dependent methyltransferase; ZP_00538691.1, structural G joint center for structural genomics, JCSG; HET: MSE; 1.90A {Exiguobacterium sibiricum 255-15}
Probab=99.29 E-value=8.1e-12 Score=119.62 Aligned_cols=90 Identities=10% Similarity=0.064 Sum_probs=75.1
Q ss_pred CCCCCeEEEEcCCCCHhHHHHHhcCCCcEEEEecCCC--------------CCcEEeccCCCCCCCCCceeEEEEcC-ce
Q 010086 114 LSQSAKSLCVETQYGQDVFALKEIGVEDSIGIFKKSS--------------KPLVISGEGHRIPFDGNTFDFVFVGG-AR 178 (518)
Q Consensus 114 l~~~~rvLDVGcGtG~~~~~L~~~g~~~v~gID~s~~--------------~~l~~~~da~~LPf~D~SFD~V~s~~-~~ 178 (518)
++++.+|||||||+|..+..+.+. .+++|+|+++. ...++.+|..++|++ ++||+|++.. +
T Consensus 31 ~~~~~~vLdiG~G~G~~~~~l~~~--~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~-~~fD~v~~~~~~- 106 (243)
T 3d2l_A 31 VEPGKRIADIGCGTGTATLLLADH--YEVTGVDLSEEMLEIAQEKAMETNRHVDFWVQDMRELELP-EPVDAITILCDS- 106 (243)
T ss_dssp SCTTCEEEEESCTTCHHHHHHTTT--SEEEEEESCHHHHHHHHHHHHHTTCCCEEEECCGGGCCCS-SCEEEEEECTTG-
T ss_pred cCCCCeEEEecCCCCHHHHHHhhC--CeEEEEECCHHHHHHHHHhhhhcCCceEEEEcChhhcCCC-CCcCEEEEeCCc-
Confidence 467789999999999999888766 69999999741 234568899999887 8999999976 6
Q ss_pred eeccC---ChHHHHHHHHhcccCCcEEEEEec
Q 010086 179 LEKAS---KPLDFASEIVRTLKPEGFAVVHVR 207 (518)
Q Consensus 179 l~~~~---dp~~~l~Ei~RVLKPGG~lvi~~~ 207 (518)
++|+. ++..+++++.|+|||||++++.+.
T Consensus 107 ~~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~ 138 (243)
T 3d2l_A 107 LNYLQTEADVKQTFDSAARLLTDGGKLLFDVH 138 (243)
T ss_dssp GGGCCSHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred hhhcCCHHHHHHHHHHHHHhcCCCeEEEEEcC
Confidence 88884 456789999999999999998764
No 80
>3mq2_A 16S rRNA methyltransferase; methyltranferase, ribosomal, antibiotic resistance, aminoglycoside, S-adenosyl-L-methionine; HET: SAH; 1.69A {Streptomyces SP}
Probab=99.28 E-value=3.6e-12 Score=121.04 Aligned_cols=94 Identities=13% Similarity=0.080 Sum_probs=75.4
Q ss_pred CCCCCeEEEEcCCCCHhHHHHHhcC-CCcEEEEecCCC-------------------CCcEEeccCCCCCCCCCceeEEE
Q 010086 114 LSQSAKSLCVETQYGQDVFALKEIG-VEDSIGIFKKSS-------------------KPLVISGEGHRIPFDGNTFDFVF 173 (518)
Q Consensus 114 l~~~~rvLDVGcGtG~~~~~L~~~g-~~~v~gID~s~~-------------------~~l~~~~da~~LPf~D~SFD~V~ 173 (518)
++++.+|||||||+|..+..|++.+ ..+|+|+|+++. ...++++|++++|+++++ |.|+
T Consensus 25 ~~~~~~vLDiGcG~G~~~~~la~~~p~~~v~gvD~s~~~l~~~~~~a~~~~~~~~~~~v~~~~~d~~~l~~~~~~-d~v~ 103 (218)
T 3mq2_A 25 SQYDDVVLDVGTGDGKHPYKVARQNPSRLVVALDADKSRMEKISAKAAAKPAKGGLPNLLYLWATAERLPPLSGV-GELH 103 (218)
T ss_dssp TTSSEEEEEESCTTCHHHHHHHHHCTTEEEEEEESCGGGGHHHHHHHTSCGGGTCCTTEEEEECCSTTCCSCCCE-EEEE
T ss_pred ccCCCEEEEecCCCCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhhhhcCCCceEEEecchhhCCCCCCC-CEEE
Confidence 5678999999999999998888763 379999999863 112468999999999888 8777
Q ss_pred EcCc--ee--eccCChHHHHHHHHhcccCCcEEEEEecC
Q 010086 174 VGGA--RL--EKASKPLDFASEIVRTLKPEGFAVVHVRA 208 (518)
Q Consensus 174 s~~~--~l--~~~~dp~~~l~Ei~RVLKPGG~lvi~~~~ 208 (518)
.... .+ +|++++..+++|+.|+|||||++++.+..
T Consensus 104 ~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 142 (218)
T 3mq2_A 104 VLMPWGSLLRGVLGSSPEMLRGMAAVCRPGASFLVALNL 142 (218)
T ss_dssp EESCCHHHHHHHHTSSSHHHHHHHHTEEEEEEEEEEEEG
T ss_pred EEccchhhhhhhhccHHHHHHHHHHHcCCCcEEEEEecc
Confidence 4321 12 37888899999999999999999997643
No 81
>3mti_A RRNA methylase; SAM-dependent, PSI, MCSG, structural genomics, midwest cente structural genomics, protein structure initiative; 1.95A {Streptococcus thermophilus} PDB: 3lby_A*
Probab=99.27 E-value=7.6e-12 Score=115.59 Aligned_cols=94 Identities=11% Similarity=0.108 Sum_probs=70.3
Q ss_pred CCCCCCeEEEEcCCCCHhHHHHHhcCCCcEEEEecCCC---------------CCcEEeccCCCCC-CCCCceeEEEEcC
Q 010086 113 YLSQSAKSLCVETQYGQDVFALKEIGVEDSIGIFKKSS---------------KPLVISGEGHRIP-FDGNTFDFVFVGG 176 (518)
Q Consensus 113 ll~~~~rvLDVGcGtG~~~~~L~~~g~~~v~gID~s~~---------------~~l~~~~da~~LP-f~D~SFD~V~s~~ 176 (518)
.++++.+|||+|||+|..+..|++.+ .+|+|+|+++. ...++.++.+.++ +++++||+|++..
T Consensus 19 ~~~~~~~vLDiGcG~G~~~~~la~~~-~~v~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~~~~~l~~~~~~~fD~v~~~~ 97 (185)
T 3mti_A 19 VLDDESIVVDATMGNGNDTAFLAGLS-KKVYAFDVQEQALGKTSQRLSDLGIENTELILDGHENLDHYVREPIRAAIFNL 97 (185)
T ss_dssp TCCTTCEEEESCCTTSHHHHHHHTTS-SEEEEEESCHHHHHHHHHHHHHHTCCCEEEEESCGGGGGGTCCSCEEEEEEEE
T ss_pred hCCCCCEEEEEcCCCCHHHHHHHHhC-CEEEEEECCHHHHHHHHHHHHHcCCCcEEEEeCcHHHHHhhccCCcCEEEEeC
Confidence 46789999999999999999998874 79999999841 1224466676654 6689999999873
Q ss_pred ceeec--------cCChHHHHHHHHhcccCCcEEEEEec
Q 010086 177 ARLEK--------ASKPLDFASEIVRTLKPEGFAVVHVR 207 (518)
Q Consensus 177 ~~l~~--------~~dp~~~l~Ei~RVLKPGG~lvi~~~ 207 (518)
.++++ ..++..+++++.|+|||||++++.+.
T Consensus 98 ~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~ 136 (185)
T 3mti_A 98 GYLPSADKSVITKPHTTLEAIEKILDRLEVGGRLAIMIY 136 (185)
T ss_dssp C-----------CHHHHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred CCCCCcchhcccChhhHHHHHHHHHHhcCCCcEEEEEEe
Confidence 22332 12335788999999999999988764
No 82
>3g2m_A PCZA361.24; SAM-dependent methyltransferase, glycopeptide antibiotics biosynthesis, structural genomics; 2.00A {Amycolatopsis orientalis} PDB: 3g2o_A* 3g2p_A* 3g2q_A*
Probab=99.27 E-value=6.7e-12 Score=125.38 Aligned_cols=92 Identities=13% Similarity=0.255 Sum_probs=74.6
Q ss_pred CCCeEEEEcCCCCHhHHHHHhcCCCcEEEEecCCC------------------CCcEEeccCCCCCCCCCceeEEEEcCc
Q 010086 116 QSAKSLCVETQYGQDVFALKEIGVEDSIGIFKKSS------------------KPLVISGEGHRIPFDGNTFDFVFVGGA 177 (518)
Q Consensus 116 ~~~rvLDVGcGtG~~~~~L~~~g~~~v~gID~s~~------------------~~l~~~~da~~LPf~D~SFD~V~s~~~ 177 (518)
++.+|||||||+|..+..|++.| .+|+|+|+++. ...++++|..++|+ +++||+|++...
T Consensus 82 ~~~~vLDlGcG~G~~~~~l~~~~-~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~v~~~~~d~~~~~~-~~~fD~v~~~~~ 159 (299)
T 3g2m_A 82 VSGPVLELAAGMGRLTFPFLDLG-WEVTALELSTSVLAAFRKRLAEAPADVRDRCTLVQGDMSAFAL-DKRFGTVVISSG 159 (299)
T ss_dssp CCSCEEEETCTTTTTHHHHHTTT-CCEEEEESCHHHHHHHHHHHHTSCHHHHTTEEEEECBTTBCCC-SCCEEEEEECHH
T ss_pred CCCcEEEEeccCCHHHHHHHHcC-CeEEEEECCHHHHHHHHHHHhhcccccccceEEEeCchhcCCc-CCCcCEEEECCc
Confidence 44599999999999999998887 68999999841 12367899999998 789999997644
Q ss_pred eeeccCC--hHHHHHHHHhcccCCcEEEEEecCC
Q 010086 178 RLEKASK--PLDFASEIVRTLKPEGFAVVHVRAK 209 (518)
Q Consensus 178 ~l~~~~d--p~~~l~Ei~RVLKPGG~lvi~~~~~ 209 (518)
.++|+.. ...+++++.|+|||||++++.+...
T Consensus 160 ~~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~ 193 (299)
T 3g2m_A 160 SINELDEADRRGLYASVREHLEPGGKFLLSLAMS 193 (299)
T ss_dssp HHTTSCHHHHHHHHHHHHHHEEEEEEEEEEEECC
T ss_pred ccccCCHHHHHHHHHHHHHHcCCCcEEEEEeecC
Confidence 3666542 3689999999999999999987544
No 83
>3dou_A Ribosomal RNA large subunit methyltransferase J; cell division, structural genomics, protein structure initiative, PSI; HET: SAM; 1.45A {Thermoplasma volcanium} SCOP: c.66.1.0
Probab=99.25 E-value=4.9e-11 Score=112.79 Aligned_cols=134 Identities=13% Similarity=0.063 Sum_probs=89.1
Q ss_pred ccCChhHHHHHhhHHHHHHHHHHcCCCCCCCeEEEEcCCCCHhHHHHHhcCCCcEEEEecCCCC----CcEEeccCCCCC
Q 010086 88 MYTSKEWIKAVNFYSSVFQDLISEGYLSQSAKSLCVETQYGQDVFALKEIGVEDSIGIFKKSSK----PLVISGEGHRIP 163 (518)
Q Consensus 88 ~w~s~~wr~~v~~~~~l~~~L~~~gll~~~~rvLDVGcGtG~~~~~L~~~g~~~v~gID~s~~~----~l~~~~da~~LP 163 (518)
-|+++.+.|-.+ +.+ ...+++++.+|||+|||+|..+..+++.+ ..|+|||+++.. ..++++|..+.+
T Consensus 4 ~yr~Ra~~KL~e----i~~---~~~~~~~g~~VLDlG~G~G~~s~~la~~~-~~V~gvD~~~~~~~~~v~~~~~D~~~~~ 75 (191)
T 3dou_A 4 QLRSRAAFKLEF----LLD---RYRVVRKGDAVIEIGSSPGGWTQVLNSLA-RKIISIDLQEMEEIAGVRFIRCDIFKET 75 (191)
T ss_dssp CTTSHHHHHHHH----HHH---HHCCSCTTCEEEEESCTTCHHHHHHTTTC-SEEEEEESSCCCCCTTCEEEECCTTSSS
T ss_pred CCCCcHHHHHHH----HHH---HcCCCCCCCEEEEEeecCCHHHHHHHHcC-CcEEEEeccccccCCCeEEEEccccCHH
Confidence 356665555332 222 22567899999999999999999888774 799999998742 235789988865
Q ss_pred CC-----------CCceeEEEEcCceee----ccCC-------hHHHHHHHHhcccCCcEEEEEecCCCccCchhHhhhc
Q 010086 164 FD-----------GNTFDFVFVGGARLE----KASK-------PLDFASEIVRTLKPEGFAVVHVRAKDEYSFNSFLDLF 221 (518)
Q Consensus 164 f~-----------D~SFD~V~s~~~~l~----~~~d-------p~~~l~Ei~RVLKPGG~lvi~~~~~~~~s~~~~~~lf 221 (518)
.. .++||+|+|... .. +..+ ...+++++.|+|||||.+++.+...... ..+...+
T Consensus 76 ~~~~~~~~~~~~~~~~~D~Vlsd~~-~~~~g~~~~d~~~~~~l~~~~l~~a~~~LkpGG~lv~k~~~~~~~--~~~~~~l 152 (191)
T 3dou_A 76 IFDDIDRALREEGIEKVDDVVSDAM-AKVSGIPSRDHAVSYQIGQRVMEIAVRYLRNGGNVLLKQFQGDMT--NDFIAIW 152 (191)
T ss_dssp HHHHHHHHHHHHTCSSEEEEEECCC-CCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEECSTHH--HHHHHHH
T ss_pred HHHHHHHHhhcccCCcceEEecCCC-cCCCCCcccCHHHHHHHHHHHHHHHHHHccCCCEEEEEEcCCCCH--HHHHHHH
Confidence 32 149999999642 11 1111 2467899999999999999876544321 2343333
Q ss_pred c-CccEEEEecc
Q 010086 222 N-SCKLVKSRDI 232 (518)
Q Consensus 222 ~-~~~~v~~~~v 232 (518)
+ .|+-|.+.++
T Consensus 153 ~~~F~~v~~~kP 164 (191)
T 3dou_A 153 RKNFSSYKISKP 164 (191)
T ss_dssp GGGEEEEEEECC
T ss_pred HHhcCEEEEECC
Confidence 3 3556665543
No 84
>1fbn_A MJ fibrillarin homologue; MJ proteins, ribosomal RNA processing, snoRNP, structural genomics, BSGC structure funded by NIH; 1.60A {Methanocaldococcus jannaschii} SCOP: c.66.1.3 PDB: 1g8s_A
Probab=99.25 E-value=7.5e-11 Score=113.60 Aligned_cols=127 Identities=16% Similarity=0.206 Sum_probs=88.6
Q ss_pred CCCCCCeEEEEcCCCCHhHHHHHhc-CCCcEEEEecCCC-------------CCcEEeccCCC----CCCCCCceeEEEE
Q 010086 113 YLSQSAKSLCVETQYGQDVFALKEI-GVEDSIGIFKKSS-------------KPLVISGEGHR----IPFDGNTFDFVFV 174 (518)
Q Consensus 113 ll~~~~rvLDVGcGtG~~~~~L~~~-g~~~v~gID~s~~-------------~~l~~~~da~~----LPf~D~SFD~V~s 174 (518)
.++++.+|||+|||+|..+..+++. |...|+|+|+++. ...++.+|+.. +|++ ++||+|+.
T Consensus 71 ~~~~~~~VLDlGcG~G~~~~~la~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~v~~~~~d~~~~~~~~~~~-~~~D~v~~ 149 (230)
T 1fbn_A 71 PIKRDSKILYLGASAGTTPSHVADIADKGIVYAIEYAPRIMRELLDACAERENIIPILGDANKPQEYANIV-EKVDVIYE 149 (230)
T ss_dssp CCCTTCEEEEESCCSSHHHHHHHHHTTTSEEEEEESCHHHHHHHHHHTTTCTTEEEEECCTTCGGGGTTTS-CCEEEEEE
T ss_pred CCCCCCEEEEEcccCCHHHHHHHHHcCCcEEEEEECCHHHHHHHHHHhhcCCCeEEEECCCCCcccccccC-ccEEEEEE
Confidence 3578899999999999999888775 5469999999841 11245788888 8887 89999983
Q ss_pred cCceeeccCCh---HHHHHHHHhcccCCcEEEEEecCC--Ccc------CchhHhhhcc--CccEEEEeccCCCCCCccc
Q 010086 175 GGARLEKASKP---LDFASEIVRTLKPEGFAVVHVRAK--DEY------SFNSFLDLFN--SCKLVKSRDIDGIDSSLPY 241 (518)
Q Consensus 175 ~~~~l~~~~dp---~~~l~Ei~RVLKPGG~lvi~~~~~--~~~------s~~~~~~lf~--~~~~v~~~~v~~~~~~~p~ 241 (518)
++++| ..+++++.|+|||||++++.+... +.. ....+. ++. .|+++....+++|.+. +
T Consensus 150 ------~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~l~-~l~~~Gf~~~~~~~~~~~~~~--~ 220 (230)
T 1fbn_A 150 ------DVAQPNQAEILIKNAKWFLKKGGYGMIAIKARSIDVTKDPKEIFKEQKE-ILEAGGFKIVDEVDIEPFEKD--H 220 (230)
T ss_dssp ------CCCSTTHHHHHHHHHHHHEEEEEEEEEEEEGGGTCSSSCHHHHHHHHHH-HHHHHTEEEEEEEECTTTSTT--E
T ss_pred ------ecCChhHHHHHHHHHHHhCCCCcEEEEEEecCCCCCCCCHHHhhHHHHH-HHHHCCCEEEEEEccCCCccc--e
Confidence 33456 678999999999999998864221 110 002233 222 5788888887777543 3
Q ss_pred eeEEEEeec
Q 010086 242 IREIVLKKE 250 (518)
Q Consensus 242 ~~~vv~kK~ 250 (518)
+ .++.+|+
T Consensus 221 ~-~v~~~k~ 228 (230)
T 1fbn_A 221 V-MFVGIWE 228 (230)
T ss_dssp E-EEEEEEC
T ss_pred E-EEEEEeC
Confidence 3 3555553
No 85
>1wzn_A SAM-dependent methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; HET: SAH; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=99.25 E-value=4.2e-11 Score=115.83 Aligned_cols=99 Identities=20% Similarity=0.256 Sum_probs=76.4
Q ss_pred HHHHcCCCCCCCeEEEEcCCCCHhHHHHHhcCCCcEEEEecCCC--------------CCcEEeccCCCCCCCCCceeEE
Q 010086 107 DLISEGYLSQSAKSLCVETQYGQDVFALKEIGVEDSIGIFKKSS--------------KPLVISGEGHRIPFDGNTFDFV 172 (518)
Q Consensus 107 ~L~~~gll~~~~rvLDVGcGtG~~~~~L~~~g~~~v~gID~s~~--------------~~l~~~~da~~LPf~D~SFD~V 172 (518)
.+......+++.+|||+|||+|..+..|++.| .+++|+|+++. ...++++|..++|++ ++||+|
T Consensus 32 ~~~~~~~~~~~~~vLDlGcG~G~~~~~l~~~~-~~v~gvD~s~~~l~~a~~~~~~~~~~v~~~~~d~~~~~~~-~~fD~v 109 (252)
T 1wzn_A 32 EIFKEDAKREVRRVLDLACGTGIPTLELAERG-YEVVGLDLHEEMLRVARRKAKERNLKIEFLQGDVLEIAFK-NEFDAV 109 (252)
T ss_dssp HHHHHTCSSCCCEEEEETCTTCHHHHHHHHTT-CEEEEEESCHHHHHHHHHHHHHTTCCCEEEESCGGGCCCC-SCEEEE
T ss_pred HHHHHhcccCCCEEEEeCCCCCHHHHHHHHCC-CeEEEEECCHHHHHHHHHHHHhcCCceEEEECChhhcccC-CCccEE
Confidence 33333344677899999999999999888877 59999999741 234578899998876 689999
Q ss_pred EEcCceeeccC--ChHHHHHHHHhcccCCcEEEEEec
Q 010086 173 FVGGARLEKAS--KPLDFASEIVRTLKPEGFAVVHVR 207 (518)
Q Consensus 173 ~s~~~~l~~~~--dp~~~l~Ei~RVLKPGG~lvi~~~ 207 (518)
++....+++.. ++.++++++.|+|||||++++.+.
T Consensus 110 ~~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~li~~~~ 146 (252)
T 1wzn_A 110 TMFFSTIMYFDEEDLRKLFSKVAEALKPGGVFITDFP 146 (252)
T ss_dssp EECSSGGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred EEcCCchhcCCHHHHHHHHHHHHHHcCCCeEEEEecc
Confidence 98643244443 456889999999999999988753
No 86
>3uwp_A Histone-lysine N-methyltransferase, H3 lysine-79; epigenetics, tubercidin, structu genomics, structural genomics consortium, SGC; HET: 5ID; 2.05A {Homo sapiens} PDB: 4eqz_A* 3sx0_A* 4er0_A* 4er7_A* 1nw3_A* 4er6_A* 4er5_A* 3qow_A* 3qox_A* 4ek9_A* 4ekg_A* 4eki_A* 4er3_A* 3sr4_A*
Probab=99.25 E-value=3.9e-12 Score=134.21 Aligned_cols=104 Identities=13% Similarity=0.091 Sum_probs=81.6
Q ss_pred hHHHHHHHHHHcCCCCCCCeEEEEcCCCCHhHHHHHh-cCCCcEEEEecCCC------------------------CCcE
Q 010086 100 FYSSVFQDLISEGYLSQSAKSLCVETQYGQDVFALKE-IGVEDSIGIFKKSS------------------------KPLV 154 (518)
Q Consensus 100 ~~~~l~~~L~~~gll~~~~rvLDVGcGtG~~~~~L~~-~g~~~v~gID~s~~------------------------~~l~ 154 (518)
.....+..+++...++++++|||||||+|..+..++. .|...++|||+++. ...+
T Consensus 157 t~~~~i~~il~~l~l~~gd~VLDLGCGtG~l~l~lA~~~g~~kVvGIDiS~~~lelAr~n~e~frkr~~~~Gl~~~rVef 236 (438)
T 3uwp_A 157 TSFDLVAQMIDEIKMTDDDLFVDLGSGVGQVVLQVAAATNCKHHYGVEKADIPAKYAETMDREFRKWMKWYGKKHAEYTL 236 (438)
T ss_dssp THHHHHHHHHHHHCCCTTCEEEEESCTTSHHHHHHHHHCCCSEEEEEECCHHHHHHHHHHHHHHHHHHHHHTBCCCEEEE
T ss_pred CCHHHHHHHHHhcCCCCCCEEEEeCCCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHHHHHHHHhCCCCCCeEE
Confidence 3445555566655678999999999999999987764 56556999999841 1235
Q ss_pred EeccCCCCCCCC--CceeEEEEcCceeeccCChHHHHHHHHhcccCCcEEEEE
Q 010086 155 ISGEGHRIPFDG--NTFDFVFVGGARLEKASKPLDFASEIVRTLKPEGFAVVH 205 (518)
Q Consensus 155 ~~~da~~LPf~D--~SFD~V~s~~~~l~~~~dp~~~l~Ei~RVLKPGG~lvi~ 205 (518)
+++|+.++||++ ++||+|+++.. + +.+++...+.|+.|+|||||++++.
T Consensus 237 i~GD~~~lp~~d~~~~aDVVf~Nn~-~-F~pdl~~aL~Ei~RvLKPGGrIVss 287 (438)
T 3uwp_A 237 ERGDFLSEEWRERIANTSVIFVNNF-A-FGPEVDHQLKERFANMKEGGRIVSS 287 (438)
T ss_dssp EECCTTSHHHHHHHHTCSEEEECCT-T-CCHHHHHHHHHHHTTSCTTCEEEES
T ss_pred EECcccCCccccccCCccEEEEccc-c-cCchHHHHHHHHHHcCCCCcEEEEe
Confidence 689999999976 58999999875 3 3466778999999999999999875
No 87
>1dus_A MJ0882; hypothetical protein, methanococcus jannaschii, structural genomics, BSGC structure funded by NIH; 1.80A {Methanocaldococcus jannaschii} SCOP: c.66.1.4
Probab=99.24 E-value=4.4e-11 Score=109.68 Aligned_cols=94 Identities=13% Similarity=0.072 Sum_probs=74.9
Q ss_pred CCCCCCeEEEEcCCCCHhHHHHHhcCCCcEEEEecCCC--------------C---CcEEeccCCCCCCCCCceeEEEEc
Q 010086 113 YLSQSAKSLCVETQYGQDVFALKEIGVEDSIGIFKKSS--------------K---PLVISGEGHRIPFDGNTFDFVFVG 175 (518)
Q Consensus 113 ll~~~~rvLDVGcGtG~~~~~L~~~g~~~v~gID~s~~--------------~---~l~~~~da~~LPf~D~SFD~V~s~ 175 (518)
..+++.+|||+|||+|..+..+.+.+ .+++|+|+++. . ..++.+|..+ ++++++||+|++.
T Consensus 49 ~~~~~~~vLdiG~G~G~~~~~~~~~~-~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~-~~~~~~~D~v~~~ 126 (194)
T 1dus_A 49 VVDKDDDILDLGCGYGVIGIALADEV-KSTTMADINRRAIKLAKENIKLNNLDNYDIRVVHSDLYE-NVKDRKYNKIITN 126 (194)
T ss_dssp CCCTTCEEEEETCTTSHHHHHHGGGS-SEEEEEESCHHHHHHHHHHHHHTTCTTSCEEEEECSTTT-TCTTSCEEEEEEC
T ss_pred ccCCCCeEEEeCCCCCHHHHHHHHcC-CeEEEEECCHHHHHHHHHHHHHcCCCccceEEEECchhc-ccccCCceEEEEC
Confidence 35678899999999999998887774 79999998741 1 3345777766 5668899999998
Q ss_pred Cceeec-cCChHHHHHHHHhcccCCcEEEEEecCC
Q 010086 176 GARLEK-ASKPLDFASEIVRTLKPEGFAVVHVRAK 209 (518)
Q Consensus 176 ~~~l~~-~~dp~~~l~Ei~RVLKPGG~lvi~~~~~ 209 (518)
.. +++ ..+...+++++.|+|||||.+++.....
T Consensus 127 ~~-~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~~ 160 (194)
T 1dus_A 127 PP-IRAGKEVLHRIIEEGKELLKDNGEIWVVIQTK 160 (194)
T ss_dssp CC-STTCHHHHHHHHHHHHHHEEEEEEEEEEEEST
T ss_pred CC-cccchhHHHHHHHHHHHHcCCCCEEEEEECCC
Confidence 76 666 3456789999999999999999987544
No 88
>2nyu_A Putative ribosomal RNA methyltransferase 2; SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.76A {Homo sapiens}
Probab=99.23 E-value=2.6e-11 Score=112.69 Aligned_cols=99 Identities=13% Similarity=0.032 Sum_probs=73.6
Q ss_pred cCCCCCCCeEEEEcCCCCHhHHHHHhc-CC---------CcEEEEecCCCC----CcEE-eccCCCCC--------CCCC
Q 010086 111 EGYLSQSAKSLCVETQYGQDVFALKEI-GV---------EDSIGIFKKSSK----PLVI-SGEGHRIP--------FDGN 167 (518)
Q Consensus 111 ~gll~~~~rvLDVGcGtG~~~~~L~~~-g~---------~~v~gID~s~~~----~l~~-~~da~~LP--------f~D~ 167 (518)
..+++++.+|||+|||+|..+..+++. |. .+|+|+|+++.. ..++ .+|..+.+ ++++
T Consensus 17 ~~~~~~~~~vLDlGcG~G~~~~~la~~~~~~~~~~~~~~~~v~~vD~s~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~ 96 (196)
T 2nyu_A 17 HQILRPGLRVLDCGAAPGAWSQVAVQKVNAAGTDPSSPVGFVLGVDLLHIFPLEGATFLCPADVTDPRTSQRILEVLPGR 96 (196)
T ss_dssp HCCCCTTCEEEEETCCSCHHHHHHHHHTTTTCCCTTSCCCEEEEECSSCCCCCTTCEEECSCCTTSHHHHHHHHHHSGGG
T ss_pred cCCCCCCCEEEEeCCCCCHHHHHHHHHhccccccccCCCceEEEEechhcccCCCCeEEEeccCCCHHHHHHHHHhcCCC
Confidence 356788999999999999999888775 43 689999998742 2245 66766543 4577
Q ss_pred ceeEEEEcCc---eeeccCCh-------HHHHHHHHhcccCCcEEEEEecCC
Q 010086 168 TFDFVFVGGA---RLEKASKP-------LDFASEIVRTLKPEGFAVVHVRAK 209 (518)
Q Consensus 168 SFD~V~s~~~---~l~~~~dp-------~~~l~Ei~RVLKPGG~lvi~~~~~ 209 (518)
+||+|+|..+ ..+|..++ ..+++++.|+|||||.+++.+...
T Consensus 97 ~fD~V~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~~~~~~ 148 (196)
T 2nyu_A 97 RADVILSDMAPNATGFRDLDHDRLISLCLTLLSVTPDILQPGGTFLCKTWAG 148 (196)
T ss_dssp CEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEECCS
T ss_pred CCcEEEeCCCCCCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCEEEEEecCC
Confidence 9999999653 12233333 478999999999999999986543
No 89
>3p9n_A Possible methyltransferase (methylase); RV2966C, adoMet binding, RNA methylase, RSMD, SAM-fold, RNA methyltransferase; 1.90A {Mycobacterium tuberculosis}
Probab=99.23 E-value=1.1e-11 Score=115.34 Aligned_cols=94 Identities=10% Similarity=-0.010 Sum_probs=75.6
Q ss_pred CCCCeEEEEcCCCCHhHHHHHhcCCCcEEEEecCCC---------------CCcEEeccCCCCC--CCCCceeEEEEcCc
Q 010086 115 SQSAKSLCVETQYGQDVFALKEIGVEDSIGIFKKSS---------------KPLVISGEGHRIP--FDGNTFDFVFVGGA 177 (518)
Q Consensus 115 ~~~~rvLDVGcGtG~~~~~L~~~g~~~v~gID~s~~---------------~~l~~~~da~~LP--f~D~SFD~V~s~~~ 177 (518)
.++.+|||+|||+|..+..+.+.|..+|+|+|+++. ...++++|+.+++ +++++||+|++...
T Consensus 43 ~~~~~vLDlgcG~G~~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~fD~i~~~~p 122 (189)
T 3p9n_A 43 LTGLAVLDLYAGSGALGLEALSRGAASVLFVESDQRSAAVIARNIEALGLSGATLRRGAVAAVVAAGTTSPVDLVLADPP 122 (189)
T ss_dssp CTTCEEEEETCTTCHHHHHHHHTTCSEEEEEECCHHHHHHHHHHHHHHTCSCEEEEESCHHHHHHHCCSSCCSEEEECCC
T ss_pred CCCCEEEEeCCCcCHHHHHHHHCCCCeEEEEECCHHHHHHHHHHHHHcCCCceEEEEccHHHHHhhccCCCccEEEECCC
Confidence 478899999999999998777677678999999841 1235678887764 56899999999875
Q ss_pred eeecc-CChHHHHHHHHh--cccCCcEEEEEecCC
Q 010086 178 RLEKA-SKPLDFASEIVR--TLKPEGFAVVHVRAK 209 (518)
Q Consensus 178 ~l~~~-~dp~~~l~Ei~R--VLKPGG~lvi~~~~~ 209 (518)
+++. .+..++++++.| +|||||++++.....
T Consensus 123 -~~~~~~~~~~~l~~~~~~~~L~pgG~l~~~~~~~ 156 (189)
T 3p9n_A 123 -YNVDSADVDAILAALGTNGWTREGTVAVVERATT 156 (189)
T ss_dssp -TTSCHHHHHHHHHHHHHSSSCCTTCEEEEEEETT
T ss_pred -CCcchhhHHHHHHHHHhcCccCCCeEEEEEecCC
Confidence 6664 567789999999 999999999987543
No 90
>3evz_A Methyltransferase; NYSGXRC, NEW YORK SGX research CE structural genomics, protein structure initiative, pyrococc furiosus, PSI-2; 2.20A {Pyrococcus furiosus}
Probab=99.23 E-value=1e-10 Score=111.76 Aligned_cols=136 Identities=13% Similarity=0.106 Sum_probs=91.7
Q ss_pred CCCCCCCeEEEEcCC-CCHhHHHHHhcCCCcEEEEecCCC--------------CCcEEeccCCCC-CCCCCceeEEEEc
Q 010086 112 GYLSQSAKSLCVETQ-YGQDVFALKEIGVEDSIGIFKKSS--------------KPLVISGEGHRI-PFDGNTFDFVFVG 175 (518)
Q Consensus 112 gll~~~~rvLDVGcG-tG~~~~~L~~~g~~~v~gID~s~~--------------~~l~~~~da~~L-Pf~D~SFD~V~s~ 175 (518)
..++++.+|||+||| +|..+..+++.+..+++|+|+++. ...++.+|+..+ ++++++||+|++.
T Consensus 51 ~~~~~~~~vLDlG~G~~G~~~~~la~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~I~~n 130 (230)
T 3evz_A 51 TFLRGGEVALEIGTGHTAMMALMAEKFFNCKVTATEVDEEFFEYARRNIERNNSNVRLVKSNGGIIKGVVEGTFDVIFSA 130 (230)
T ss_dssp TTCCSSCEEEEECCTTTCHHHHHHHHHHCCEEEEEECCHHHHHHHHHHHHHTTCCCEEEECSSCSSTTTCCSCEEEEEEC
T ss_pred hhcCCCCEEEEcCCCHHHHHHHHHHHhcCCEEEEEECCHHHHHHHHHHHHHhCCCcEEEeCCchhhhhcccCceeEEEEC
Confidence 346789999999999 999998888762379999999741 234567887544 6788999999997
Q ss_pred CceeeccCC-------------------hHHHHHHHHhcccCCcEEEEEecCCCccCchhHhhhcc--CccEEEEeccCC
Q 010086 176 GARLEKASK-------------------PLDFASEIVRTLKPEGFAVVHVRAKDEYSFNSFLDLFN--SCKLVKSRDIDG 234 (518)
Q Consensus 176 ~~~l~~~~d-------------------p~~~l~Ei~RVLKPGG~lvi~~~~~~~~s~~~~~~lf~--~~~~v~~~~v~~ 234 (518)
.. +++..+ ...+++++.|+|||||++++.+..... ....+.+++. .+++..+....+
T Consensus 131 pp-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~-~~~~~~~~l~~~g~~~~~~~~~~g 208 (230)
T 3evz_A 131 PP-YYDKPLGRVLTEREAIGGGKYGEEFSVKLLEEAFDHLNPGGKVALYLPDKEK-LLNVIKERGIKLGYSVKDIKFKVG 208 (230)
T ss_dssp CC-CC---------------CCSSSCHHHHHHHHHHGGGEEEEEEEEEEEESCHH-HHHHHHHHHHHTTCEEEEEEECCC
T ss_pred CC-CcCCccccccChhhhhccCccchHHHHHHHHHHHHHhCCCeEEEEEecccHh-HHHHHHHHHHHcCCceEEEEecCC
Confidence 54 433222 367899999999999999987654321 1123333332 456666655444
Q ss_pred CCCCccceeEEEEeecccc
Q 010086 235 IDSSLPYIREIVLKKESDL 253 (518)
Q Consensus 235 ~~~~~p~~~~vv~kK~~~~ 253 (518)
+. ..+.+++.|....
T Consensus 209 ~~----~~~~l~f~~~~~~ 223 (230)
T 3evz_A 209 TR----WRHSLIFFKGISE 223 (230)
T ss_dssp C-----CEEEEEEECCC--
T ss_pred Ce----EEEEEEEeccccc
Confidence 44 4567888886444
No 91
>2fyt_A Protein arginine N-methyltransferase 3; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.6 PDB: 3smq_A* 1f3l_A*
Probab=99.22 E-value=2.9e-11 Score=124.30 Aligned_cols=91 Identities=13% Similarity=0.031 Sum_probs=75.2
Q ss_pred CCCCCCeEEEEcCCCCHhHHHHHhcCCCcEEEEecCCC---------------CCcEEeccCCCCCCCCCceeEEEEcCc
Q 010086 113 YLSQSAKSLCVETQYGQDVFALKEIGVEDSIGIFKKSS---------------KPLVISGEGHRIPFDGNTFDFVFVGGA 177 (518)
Q Consensus 113 ll~~~~rvLDVGcGtG~~~~~L~~~g~~~v~gID~s~~---------------~~l~~~~da~~LPf~D~SFD~V~s~~~ 177 (518)
.+.++.+|||||||+|..+..+++.|..+|+|+|+++. ...++.+|++++++++++||+|++...
T Consensus 61 ~~~~~~~VLDiGcGtG~ls~~la~~g~~~v~gvD~s~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~D~Ivs~~~ 140 (340)
T 2fyt_A 61 HIFKDKVVLDVGCGTGILSMFAAKAGAKKVLGVDQSEILYQAMDIIRLNKLEDTITLIKGKIEEVHLPVEKVDVIISEWM 140 (340)
T ss_dssp GGTTTCEEEEETCTTSHHHHHHHHTTCSEEEEEESSTHHHHHHHHHHHTTCTTTEEEEESCTTTSCCSCSCEEEEEECCC
T ss_pred hhcCCCEEEEeeccCcHHHHHHHHcCCCEEEEEChHHHHHHHHHHHHHcCCCCcEEEEEeeHHHhcCCCCcEEEEEEcCc
Confidence 35678899999999999998888887669999999841 123568899999999999999998651
Q ss_pred --eeeccCChHHHHHHHHhcccCCcEEE
Q 010086 178 --RLEKASKPLDFASEIVRTLKPEGFAV 203 (518)
Q Consensus 178 --~l~~~~dp~~~l~Ei~RVLKPGG~lv 203 (518)
.+.|..++..++.++.|+|||||+++
T Consensus 141 ~~~l~~~~~~~~~l~~~~~~LkpgG~li 168 (340)
T 2fyt_A 141 GYFLLFESMLDSVLYAKNKYLAKGGSVY 168 (340)
T ss_dssp BTTBTTTCHHHHHHHHHHHHEEEEEEEE
T ss_pred hhhccCHHHHHHHHHHHHhhcCCCcEEE
Confidence 15565667789999999999999987
No 92
>4df3_A Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; NADP rossmann superfamily, S-adenosyl-L-M (SAM) binding, nucleolus; HET: SAM; 1.73A {Aeropyrum pernix}
Probab=99.22 E-value=1e-11 Score=121.93 Aligned_cols=123 Identities=11% Similarity=0.162 Sum_probs=87.1
Q ss_pred CCCCCCeEEEEcCCCCHhHHHHHhc-C-CCcEEEEecCCC-----------CCc--EEecc---CCCCCCCCCceeEEEE
Q 010086 113 YLSQSAKSLCVETQYGQDVFALKEI-G-VEDSIGIFKKSS-----------KPL--VISGE---GHRIPFDGNTFDFVFV 174 (518)
Q Consensus 113 ll~~~~rvLDVGcGtG~~~~~L~~~-g-~~~v~gID~s~~-----------~~l--~~~~d---a~~LPf~D~SFD~V~s 174 (518)
.++||++|||+|||+|..+..+++. | .+.|+|+|+++. ... .+.++ .+..|+.+++||+|++
T Consensus 74 ~ikpG~~VldlG~G~G~~~~~la~~VG~~G~V~avD~s~~~~~~l~~~a~~~~ni~~V~~d~~~p~~~~~~~~~vDvVf~ 153 (233)
T 4df3_A 74 PVKEGDRILYLGIASGTTASHMSDIIGPRGRIYGVEFAPRVMRDLLTVVRDRRNIFPILGDARFPEKYRHLVEGVDGLYA 153 (233)
T ss_dssp CCCTTCEEEEETCTTSHHHHHHHHHHCTTCEEEEEECCHHHHHHHHHHSTTCTTEEEEESCTTCGGGGTTTCCCEEEEEE
T ss_pred CCCCCCEEEEecCcCCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHhhHhhcCeeEEEEeccCccccccccceEEEEEE
Confidence 4799999999999999999988873 4 368999999841 122 23444 4556888999999998
Q ss_pred cCceeeccCChHHHHHHHHhcccCCcEEEEEecCCCc-------cCc-hhHhhh-ccCccEEEEeccCCCCCC
Q 010086 175 GGARLEKASKPLDFASEIVRTLKPEGFAVVHVRAKDE-------YSF-NSFLDL-FNSCKLVKSRDIDGIDSS 238 (518)
Q Consensus 175 ~~~~l~~~~dp~~~l~Ei~RVLKPGG~lvi~~~~~~~-------~s~-~~~~~l-f~~~~~v~~~~v~~~~~~ 238 (518)
. +.|..++..++.|+.|+|||||.+++.+..... ..+ .....| -..|+++......+|...
T Consensus 154 d---~~~~~~~~~~l~~~~r~LKpGG~lvI~ik~r~~d~~~p~~~~~~~ev~~L~~~GF~l~e~i~L~pf~~~ 223 (233)
T 4df3_A 154 D---VAQPEQAAIVVRNARFFLRDGGYMLMAIKARSIDVTTEPSEVYKREIKTLMDGGLEIKDVVHLDPFDRD 223 (233)
T ss_dssp C---CCCTTHHHHHHHHHHHHEEEEEEEEEEEECCHHHHHTCCCHHHHHHHHHHHHTTCCEEEEEECTTTSTT
T ss_pred e---ccCChhHHHHHHHHHHhccCCCEEEEEEecccCCCCCChHHHHHHHHHHHHHCCCEEEEEEccCCCCCc
Confidence 5 445567788999999999999999887532211 000 112222 136788888777777654
No 93
>3iv6_A Putative Zn-dependent alcohol dehydrogenase; alpha/beta fold, rossmann-fold, structural genomics, PSI-2, structure initiative; HET: SAM; 2.70A {Rhodobacter sphaeroides}
Probab=99.22 E-value=1.8e-11 Score=122.06 Aligned_cols=100 Identities=10% Similarity=0.013 Sum_probs=77.1
Q ss_pred HHHHHcCCCCCCCeEEEEcCCCCHhHHHHHhcCCCcEEEEecCCC---------CCcEEeccCCCCCC-----CCCceeE
Q 010086 106 QDLISEGYLSQSAKSLCVETQYGQDVFALKEIGVEDSIGIFKKSS---------KPLVISGEGHRIPF-----DGNTFDF 171 (518)
Q Consensus 106 ~~L~~~gll~~~~rvLDVGcGtG~~~~~L~~~g~~~v~gID~s~~---------~~l~~~~da~~LPf-----~D~SFD~ 171 (518)
+.+++...++++.+|||||||+|..+..|++.| .+|+|+|+|+. ....++++...+++ .+++||+
T Consensus 35 ~~il~~l~l~~g~~VLDlGcGtG~~a~~La~~g-~~V~gvD~S~~ml~~Ar~~~~~~~v~~~~~~~~~~~~~~~~~~fD~ 113 (261)
T 3iv6_A 35 ENDIFLENIVPGSTVAVIGASTRFLIEKALERG-ASVTVFDFSQRMCDDLAEALADRCVTIDLLDITAEIPKELAGHFDF 113 (261)
T ss_dssp HHHHHTTTCCTTCEEEEECTTCHHHHHHHHHTT-CEEEEEESCHHHHHHHHHHTSSSCCEEEECCTTSCCCGGGTTCCSE
T ss_pred HHHHHhcCCCCcCEEEEEeCcchHHHHHHHhcC-CEEEEEECCHHHHHHHHHHHHhccceeeeeecccccccccCCCccE
Confidence 334444456789999999999999999998887 69999999841 11134555555554 2679999
Q ss_pred EEEcCceeeccCC--hHHHHHHHHhcccCCcEEEEEecC
Q 010086 172 VFVGGARLEKASK--PLDFASEIVRTLKPEGFAVVHVRA 208 (518)
Q Consensus 172 V~s~~~~l~~~~d--p~~~l~Ei~RVLKPGG~lvi~~~~ 208 (518)
|++..+ ++|+.. ...+++++.|+| |||++++....
T Consensus 114 Vv~~~~-l~~~~~~~~~~~l~~l~~lL-PGG~l~lS~~~ 150 (261)
T 3iv6_A 114 VLNDRL-INRFTTEEARRACLGMLSLV-GSGTVRASVKL 150 (261)
T ss_dssp EEEESC-GGGSCHHHHHHHHHHHHHHH-TTSEEEEEEEB
T ss_pred EEEhhh-hHhCCHHHHHHHHHHHHHhC-cCcEEEEEecc
Confidence 999987 998753 346899999999 99999998643
No 94
>1nt2_A Fibrillarin-like PRE-rRNA processing protein; adeMet, binding motif, RNA binding protein; HET: SAM; 2.90A {Archaeoglobus fulgidus} SCOP: c.66.1.3
Probab=99.21 E-value=2.3e-11 Score=116.65 Aligned_cols=119 Identities=14% Similarity=0.128 Sum_probs=80.5
Q ss_pred CCCCCeEEEEcCCCCHhHHHHHhc-CCCcEEEEecCCC-------------CCcEEeccCCC----CCCCCCceeEEEEc
Q 010086 114 LSQSAKSLCVETQYGQDVFALKEI-GVEDSIGIFKKSS-------------KPLVISGEGHR----IPFDGNTFDFVFVG 175 (518)
Q Consensus 114 l~~~~rvLDVGcGtG~~~~~L~~~-g~~~v~gID~s~~-------------~~l~~~~da~~----LPf~D~SFD~V~s~ 175 (518)
++++.+|||||||+|..+..+++. |..+|+|+|+|+. ....+.+|+.. .|++ ++||+|++.
T Consensus 55 ~~~g~~VLDlGcGtG~~~~~la~~~~~~~V~gvD~s~~~l~~~~~~a~~~~~v~~~~~d~~~~~~~~~~~-~~fD~V~~~ 133 (210)
T 1nt2_A 55 LRGDERVLYLGAASGTTVSHLADIVDEGIIYAVEYSAKPFEKLLELVRERNNIIPLLFDASKPWKYSGIV-EKVDLIYQD 133 (210)
T ss_dssp CCSSCEEEEETCTTSHHHHHHHHHTTTSEEEEECCCHHHHHHHHHHHHHCSSEEEECSCTTCGGGTTTTC-CCEEEEEEC
T ss_pred CCCCCEEEEECCcCCHHHHHHHHHcCCCEEEEEECCHHHHHHHHHHHhcCCCeEEEEcCCCCchhhcccc-cceeEEEEe
Confidence 578899999999999998888764 3358999999852 11234567766 3665 899999997
Q ss_pred CceeeccCChHHHHHHHHhcccCCcEEEEEecCCC--c-cCchhH-----hhhccCccEEEEeccCCCC
Q 010086 176 GARLEKASKPLDFASEIVRTLKPEGFAVVHVRAKD--E-YSFNSF-----LDLFNSCKLVKSRDIDGID 236 (518)
Q Consensus 176 ~~~l~~~~dp~~~l~Ei~RVLKPGG~lvi~~~~~~--~-~s~~~~-----~~lf~~~~~v~~~~v~~~~ 236 (518)
. .++ .+...+++|+.|+|||||++++.+.... . .+...+ ..+-+.|+++......+|+
T Consensus 134 ~--~~~-~~~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~l~~~f~~~~~~~~~p~~ 199 (210)
T 1nt2_A 134 I--AQK-NQIEILKANAEFFLKEKGEVVIMVKARSIDSTAEPEEVFKSVLKEMEGDFKIVKHGSLMPYH 199 (210)
T ss_dssp C--CST-THHHHHHHHHHHHEEEEEEEEEEEEHHHHCTTSCHHHHHHHHHHHHHTTSEEEEEEECTTTC
T ss_pred c--cCh-hHHHHHHHHHHHHhCCCCEEEEEEecCCccccCCHHHHHHHHHHHHHhhcEEeeeecCCCCC
Confidence 4 232 2233458999999999999998853211 1 111121 1121228888887776665
No 95
>3g07_A 7SK snRNA methylphosphate capping enzyme; structural genomics consortium (SGC), methyltransferase, phosphoprotein, S-adenosyl-L-methionine; HET: SAM; 2.65A {Homo sapiens}
Probab=99.20 E-value=1.5e-11 Score=123.31 Aligned_cols=90 Identities=16% Similarity=0.171 Sum_probs=71.3
Q ss_pred CCCeEEEEcCCCCHhHHHHHhc-CCCcEEEEecCCC--------------------------------------------
Q 010086 116 QSAKSLCVETQYGQDVFALKEI-GVEDSIGIFKKSS-------------------------------------------- 150 (518)
Q Consensus 116 ~~~rvLDVGcGtG~~~~~L~~~-g~~~v~gID~s~~-------------------------------------------- 150 (518)
++.+|||||||+|..+..+++. +..+|+|||+++.
T Consensus 46 ~~~~VLDiGCG~G~~~~~la~~~~~~~v~gvDis~~~i~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 125 (292)
T 3g07_A 46 RGRDVLDLGCNVGHLTLSIACKWGPSRMVGLDIDSRLIHSARQNIRHYLSEELRLPPQTLEGDPGAEGEEGTTTVRKRSC 125 (292)
T ss_dssp TTSEEEEESCTTCHHHHHHHHHTCCSEEEEEESCHHHHHHHHHTC-----------------------------------
T ss_pred CCCcEEEeCCCCCHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHHHhhhhhhcccccccccccccccccccccccccccc
Confidence 5789999999999999888774 4579999999731
Q ss_pred -----------------------------CCcEEeccCCCC-----CCCCCceeEEEEcCceeeccC------ChHHHHH
Q 010086 151 -----------------------------KPLVISGEGHRI-----PFDGNTFDFVFVGGARLEKAS------KPLDFAS 190 (518)
Q Consensus 151 -----------------------------~~l~~~~da~~L-----Pf~D~SFD~V~s~~~~l~~~~------dp~~~l~ 190 (518)
...++++|.... ++.+++||+|+|..+ ++|+. ++.++++
T Consensus 126 ~p~~~~~~~g~~~~p~~~~~~~~~~~~p~~v~f~~~d~~~~~~~~~~~~~~~fD~I~~~~v-l~~ihl~~~~~~~~~~l~ 204 (292)
T 3g07_A 126 FPASLTASRGPIAAPQVPLDGADTSVFPNNVVFVTGNYVLDRDDLVEAQTPEYDVVLCLSL-TKWVHLNWGDEGLKRMFR 204 (292)
T ss_dssp ----------------CCSSTTCCSSTTTTEEEEECCCCCSSHHHHTTCCCCEEEEEEESC-HHHHHHHHHHHHHHHHHH
T ss_pred ccchhhhccCccccccccccccccccccccceEEecccccCccccccccCCCcCEEEEChH-HHHhhhcCCHHHHHHHHH
Confidence 012345565543 378999999999997 76663 5678999
Q ss_pred HHHhcccCCcEEEEEe
Q 010086 191 EIVRTLKPEGFAVVHV 206 (518)
Q Consensus 191 Ei~RVLKPGG~lvi~~ 206 (518)
+++|+|||||++++..
T Consensus 205 ~~~~~LkpGG~lil~~ 220 (292)
T 3g07_A 205 RIYRHLRPGGILVLEP 220 (292)
T ss_dssp HHHHHEEEEEEEEEEC
T ss_pred HHHHHhCCCcEEEEec
Confidence 9999999999999964
No 96
>3m33_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MCSG, midwest center for structural genomics; 2.19A {Deinococcus radiodurans}
Probab=99.20 E-value=1.7e-11 Score=117.67 Aligned_cols=82 Identities=13% Similarity=0.157 Sum_probs=70.4
Q ss_pred CCCCCeEEEEcCCCCHhHHHHHhcCCCcEEEEecCCC----------CCcEEeccC-CCCCCC-CCceeEEEEcCceeec
Q 010086 114 LSQSAKSLCVETQYGQDVFALKEIGVEDSIGIFKKSS----------KPLVISGEG-HRIPFD-GNTFDFVFVGGARLEK 181 (518)
Q Consensus 114 l~~~~rvLDVGcGtG~~~~~L~~~g~~~v~gID~s~~----------~~l~~~~da-~~LPf~-D~SFD~V~s~~~~l~~ 181 (518)
++++.+|||||||+|..+..+++.+ .+|+|+|+++. ...++.+|. +.+|++ +++||+|++..
T Consensus 46 ~~~~~~vLDiGcG~G~~~~~l~~~~-~~v~~vD~s~~~~~~a~~~~~~~~~~~~d~~~~~~~~~~~~fD~v~~~~----- 119 (226)
T 3m33_A 46 LTPQTRVLEAGCGHGPDAARFGPQA-ARWAAYDFSPELLKLARANAPHADVYEWNGKGELPAGLGAPFGLIVSRR----- 119 (226)
T ss_dssp CCTTCEEEEESCTTSHHHHHHGGGS-SEEEEEESCHHHHHHHHHHCTTSEEEECCSCSSCCTTCCCCEEEEEEES-----
T ss_pred CCCCCeEEEeCCCCCHHHHHHHHcC-CEEEEEECCHHHHHHHHHhCCCceEEEcchhhccCCcCCCCEEEEEeCC-----
Confidence 4688999999999999999998886 69999999842 234678888 689999 99999999863
Q ss_pred cCChHHHHHHHHhcccCCcEEE
Q 010086 182 ASKPLDFASEIVRTLKPEGFAV 203 (518)
Q Consensus 182 ~~dp~~~l~Ei~RVLKPGG~lv 203 (518)
++..+++++.|+|||||+++
T Consensus 120 --~~~~~l~~~~~~LkpgG~l~ 139 (226)
T 3m33_A 120 --GPTSVILRLPELAAPDAHFL 139 (226)
T ss_dssp --CCSGGGGGHHHHEEEEEEEE
T ss_pred --CHHHHHHHHHHHcCCCcEEE
Confidence 46788999999999999998
No 97
>3dmg_A Probable ribosomal RNA small subunit methyltransf; monomethyltranserase, 16S rRNA methyltransferase, N2 G1207 methyltransferase; HET: SAH; 1.55A {Thermus thermophilus} PDB: 3dmf_A* 3dmh_A* 2zul_A* 2zwv_A*
Probab=99.20 E-value=6.5e-11 Score=123.95 Aligned_cols=110 Identities=14% Similarity=0.250 Sum_probs=87.8
Q ss_pred CCCCeEEEEcCCCCHhHHHHHhcCCCcEEEEecCCC--------------CCcEEeccCCCCCCCCCceeEEEEcCceee
Q 010086 115 SQSAKSLCVETQYGQDVFALKEIGVEDSIGIFKKSS--------------KPLVISGEGHRIPFDGNTFDFVFVGGARLE 180 (518)
Q Consensus 115 ~~~~rvLDVGcGtG~~~~~L~~~g~~~v~gID~s~~--------------~~l~~~~da~~LPf~D~SFD~V~s~~~~l~ 180 (518)
.++.+|||+|||+|..+..+.+.+ .+|+|+|+++. ...++.+|+.+.++++++||+|++... +|
T Consensus 232 ~~~~~VLDlGcG~G~~~~~la~~g-~~V~gvDis~~al~~A~~n~~~~~~~v~~~~~D~~~~~~~~~~fD~Ii~npp-~~ 309 (381)
T 3dmg_A 232 VRGRQVLDLGAGYGALTLPLARMG-AEVVGVEDDLASVLSLQKGLEANALKAQALHSDVDEALTEEARFDIIVTNPP-FH 309 (381)
T ss_dssp TTTCEEEEETCTTSTTHHHHHHTT-CEEEEEESBHHHHHHHHHHHHHTTCCCEEEECSTTTTSCTTCCEEEEEECCC-CC
T ss_pred CCCCEEEEEeeeCCHHHHHHHHcC-CEEEEEECCHHHHHHHHHHHHHcCCCeEEEEcchhhccccCCCeEEEEECCc-hh
Confidence 367899999999999999888877 69999999741 234678999999888899999999876 77
Q ss_pred c-----cCChHHHHHHHHhcccCCcEEEEEecCCCccCchhHhhhccCccEE
Q 010086 181 K-----ASKPLDFASEIVRTLKPEGFAVVHVRAKDEYSFNSFLDLFNSCKLV 227 (518)
Q Consensus 181 ~-----~~dp~~~l~Ei~RVLKPGG~lvi~~~~~~~~s~~~~~~lf~~~~~v 227 (518)
+ ..++..+++++.|+|||||++++.......|. ..+.+.|.+++.+
T Consensus 310 ~~~~~~~~~~~~~l~~~~~~LkpGG~l~iv~n~~l~~~-~~l~~~f~~v~~l 360 (381)
T 3dmg_A 310 VGGAVILDVAQAFVNVAAARLRPGGVFFLVSNPFLKYE-PLLEEKFGAFQTL 360 (381)
T ss_dssp TTCSSCCHHHHHHHHHHHHHEEEEEEEEEEECTTSCHH-HHHHHHHSCCEEE
T ss_pred hcccccHHHHHHHHHHHHHhcCcCcEEEEEEcCCCChH-HHHHHhhccEEEE
Confidence 7 34566899999999999999999875443332 3355568887777
No 98
>2oxt_A Nucleoside-2'-O-methyltransferase; flavivirus, viral enzyme, RNA capping, S-adenosyl-L-methionine, viral protein; HET: SAM; 2.90A {Meaban virus}
Probab=99.20 E-value=3.9e-11 Score=119.63 Aligned_cols=93 Identities=13% Similarity=0.102 Sum_probs=71.8
Q ss_pred HcCCCCCCCeEEEEcCCCCHhHHHHHhcCCCcEEEEecCCC------CC----------cEE--eccCCCCCCCCCceeE
Q 010086 110 SEGYLSQSAKSLCVETQYGQDVFALKEIGVEDSIGIFKKSS------KP----------LVI--SGEGHRIPFDGNTFDF 171 (518)
Q Consensus 110 ~~gll~~~~rvLDVGcGtG~~~~~L~~~g~~~v~gID~s~~------~~----------l~~--~~da~~LPf~D~SFD~ 171 (518)
+..+++++.+|||||||+|..+..+++. ..|+|||+++. .+ .++ ++|+.++| +++||+
T Consensus 68 ~~~~~~~g~~VLDlGcGtG~~s~~la~~--~~V~gvD~s~m~~~a~~~~~~~~~~~~~v~~~~~~~D~~~l~--~~~fD~ 143 (265)
T 2oxt_A 68 ERGYVELTGRVVDLGCGRGGWSYYAASR--PHVMDVRAYTLGVGGHEVPRITESYGWNIVKFKSRVDIHTLP--VERTDV 143 (265)
T ss_dssp HHTSCCCCEEEEEESCTTSHHHHHHHTS--TTEEEEEEECCCCSSCCCCCCCCBTTGGGEEEECSCCTTTSC--CCCCSE
T ss_pred HcCCCCCCCEEEEeCcCCCHHHHHHHHc--CcEEEEECchhhhhhhhhhhhhhccCCCeEEEecccCHhHCC--CCCCcE
Confidence 3467889999999999999999888876 68999999863 11 235 67888766 889999
Q ss_pred EEEcCceeeccCCh----H---HHHHHHHhcccCCc--EEEEEecC
Q 010086 172 VFVGGARLEKASKP----L---DFASEIVRTLKPEG--FAVVHVRA 208 (518)
Q Consensus 172 V~s~~~~l~~~~dp----~---~~l~Ei~RVLKPGG--~lvi~~~~ 208 (518)
|+|..+ ++..++ . .++.++.|+||||| .+++.+..
T Consensus 144 V~sd~~--~~~~~~~~d~~~~l~~L~~~~r~LkpGG~~~fv~kv~~ 187 (265)
T 2oxt_A 144 IMCDVG--ESSPKWSVESERTIKILELLEKWKVKNPSADFVVKVLC 187 (265)
T ss_dssp EEECCC--CCCSCHHHHHHHHHHHHHHHHHHHHHCTTCEEEEEESC
T ss_pred EEEeCc--ccCCccchhHHHHHHHHHHHHHHhccCCCeEEEEEeCC
Confidence 999753 333232 1 37899999999999 88886644
No 99
>2wa2_A Non-structural protein 5; transferase, S-adenosyl-L- methionine, virion, membrane, flavivirus, N7-methyltransferase, 2'-O-methyltransferase; HET: SAM; 1.80A {Modoc virus} PDB: 2wa1_A*
Probab=99.19 E-value=3.7e-11 Score=120.55 Aligned_cols=96 Identities=13% Similarity=0.015 Sum_probs=73.4
Q ss_pred HHHHcCCCCCCCeEEEEcCCCCHhHHHHHhcCCCcEEEEecCCC------CC----------cEE--eccCCCCCCCCCc
Q 010086 107 DLISEGYLSQSAKSLCVETQYGQDVFALKEIGVEDSIGIFKKSS------KP----------LVI--SGEGHRIPFDGNT 168 (518)
Q Consensus 107 ~L~~~gll~~~~rvLDVGcGtG~~~~~L~~~g~~~v~gID~s~~------~~----------l~~--~~da~~LPf~D~S 168 (518)
.+.+.+.++++.+|||||||+|..+..+++. ..|+|||+++. .+ .++ ++|+.++| +++
T Consensus 73 ~i~~~~~~~~g~~VLDlGcGtG~~s~~la~~--~~V~gVD~s~m~~~a~~~~~~~~~~~~~v~~~~~~~D~~~l~--~~~ 148 (276)
T 2wa2_A 73 WIDERGGVELKGTVVDLGCGRGSWSYYAASQ--PNVREVKAYTLGTSGHEKPRLVETFGWNLITFKSKVDVTKME--PFQ 148 (276)
T ss_dssp HHHHTTSCCCCEEEEEESCTTCHHHHHHHTS--TTEEEEEEECCCCTTSCCCCCCCCTTGGGEEEECSCCGGGCC--CCC
T ss_pred HHHHcCCCCCCCEEEEeccCCCHHHHHHHHc--CCEEEEECchhhhhhhhchhhhhhcCCCeEEEeccCcHhhCC--CCC
Confidence 3445567889999999999999999888877 58999999863 11 235 77888866 889
Q ss_pred eeEEEEcCceeeccCCh----H---HHHHHHHhcccCCc--EEEEEecC
Q 010086 169 FDFVFVGGARLEKASKP----L---DFASEIVRTLKPEG--FAVVHVRA 208 (518)
Q Consensus 169 FD~V~s~~~~l~~~~dp----~---~~l~Ei~RVLKPGG--~lvi~~~~ 208 (518)
||+|+|..+ ++..++ . .+++++.|+||||| .+++.+..
T Consensus 149 fD~Vvsd~~--~~~~~~~~d~~~~l~~L~~~~r~LkpGG~~~~v~~~~~ 195 (276)
T 2wa2_A 149 ADTVLCDIG--ESNPTAAVEASRTLTVLNVISRWLEYNQGCGFCVKVLN 195 (276)
T ss_dssp CSEEEECCC--CCCSCHHHHHHHHHHHHHHHHHHHHHSTTCEEEEEESC
T ss_pred cCEEEECCC--cCCCchhhhHHHHHHHHHHHHHHhccCCCcEEEEEeCC
Confidence 999999763 222232 1 47899999999999 88886544
No 100
>3eey_A Putative rRNA methylase; rRNA methylation, S-adenosyl-methionine, structural genomics structure initiative, PSI; HET: SAM; 2.20A {Clostridium thermocellum atcc 27405}
Probab=99.19 E-value=3.6e-11 Score=112.17 Aligned_cols=137 Identities=12% Similarity=0.159 Sum_probs=91.0
Q ss_pred CCCCCeEEEEcCCCCHhHHHHHhc--CCCcEEEEecCCC----------------CCcEEeccCCCCC-CCCCceeEEEE
Q 010086 114 LSQSAKSLCVETQYGQDVFALKEI--GVEDSIGIFKKSS----------------KPLVISGEGHRIP-FDGNTFDFVFV 174 (518)
Q Consensus 114 l~~~~rvLDVGcGtG~~~~~L~~~--g~~~v~gID~s~~----------------~~l~~~~da~~LP-f~D~SFD~V~s 174 (518)
++++.+|||+|||+|..+..+++. +..+++|+|+++. ...++.+|+.+++ +.+++||+|++
T Consensus 20 ~~~~~~vLDlGcG~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~v~~ 99 (197)
T 3eey_A 20 VKEGDTVVDATCGNGNDTAFLASLVGENGRVFGFDIQDKAIANTTKKLTDLNLIDRVTLIKDGHQNMDKYIDCPVKAVMF 99 (197)
T ss_dssp CCTTCEEEESCCTTSHHHHHHHHHHCTTCEEEEECSCHHHHHHHHHHHHHTTCGGGEEEECSCGGGGGGTCCSCEEEEEE
T ss_pred CCCCCEEEEcCCCCCHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCeEEEECCHHHHhhhccCCceEEEE
Confidence 578899999999999999887764 3359999999741 1235678888886 78899999998
Q ss_pred cCceee--------ccCChHHHHHHHHhcccCCcEEEEEecCCCc--c----CchhHhh-h-ccCccEEEEeccCCCCCC
Q 010086 175 GGARLE--------KASKPLDFASEIVRTLKPEGFAVVHVRAKDE--Y----SFNSFLD-L-FNSCKLVKSRDIDGIDSS 238 (518)
Q Consensus 175 ~~~~l~--------~~~dp~~~l~Ei~RVLKPGG~lvi~~~~~~~--~----s~~~~~~-l-f~~~~~v~~~~v~~~~~~ 238 (518)
....+. +..++.++++++.|+|||||++++....... . ....+.. + .+.|++.+...++..+.
T Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Lk~gG~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~v~~~~~~~~~~~- 178 (197)
T 3eey_A 100 NLGYLPSGDHSISTRPETTIQALSKAMELLVTGGIITVVIYYGGDTGFEEKEKVLEFLKGVDQKKFIVQRTDFINQANC- 178 (197)
T ss_dssp EESBCTTSCTTCBCCHHHHHHHHHHHHHHEEEEEEEEEEECCBTTTBSHHHHHHHHHHTTSCTTTEEEEEEEETTCCSC-
T ss_pred cCCcccCcccccccCcccHHHHHHHHHHhCcCCCEEEEEEccCCCCcHHHHHHHHHHHHhCCCCcEEEEEEEeccCccC-
Confidence 764111 1113457999999999999999887533211 0 0111221 1 13578887777654332
Q ss_pred ccceeEEEEeecccc
Q 010086 239 LPYIREIVLKKESDL 253 (518)
Q Consensus 239 ~p~~~~vv~kK~~~~ 253 (518)
-|+ .++.+|..+.
T Consensus 179 pp~--~~~~~~~~~~ 191 (197)
T 3eey_A 179 PPI--LVCIEKISEG 191 (197)
T ss_dssp CCE--EEEEEECCSS
T ss_pred CCe--EEEEEEcccc
Confidence 234 3556666544
No 101
>3lbf_A Protein-L-isoaspartate O-methyltransferase; modified rossman-type fold, S-adenosyl-L- methionine; HET: SAH; 1.80A {Escherichia coli}
Probab=99.18 E-value=5.6e-11 Score=111.94 Aligned_cols=88 Identities=17% Similarity=0.191 Sum_probs=74.0
Q ss_pred CCCCCCeEEEEcCCCCHhHHHHHhcCCCcEEEEecCCC---------------CCcEEeccCCCCCCCCCceeEEEEcCc
Q 010086 113 YLSQSAKSLCVETQYGQDVFALKEIGVEDSIGIFKKSS---------------KPLVISGEGHRIPFDGNTFDFVFVGGA 177 (518)
Q Consensus 113 ll~~~~rvLDVGcGtG~~~~~L~~~g~~~v~gID~s~~---------------~~l~~~~da~~LPf~D~SFD~V~s~~~ 177 (518)
.++++.+|||||||+|..+..+++.+ .+++|+|+++. ...++.+|+.+.+.++++||+|++..+
T Consensus 74 ~~~~~~~vLdiG~G~G~~~~~la~~~-~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~~D~i~~~~~ 152 (210)
T 3lbf_A 74 ELTPQSRVLEIGTGSGYQTAILAHLV-QHVCSVERIKGLQWQARRRLKNLDLHNVSTRHGDGWQGWQARAPFDAIIVTAA 152 (210)
T ss_dssp TCCTTCEEEEECCTTSHHHHHHHHHS-SEEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCGGGCCGGGCCEEEEEESSB
T ss_pred CCCCCCEEEEEcCCCCHHHHHHHHhC-CEEEEEecCHHHHHHHHHHHHHcCCCceEEEECCcccCCccCCCccEEEEccc
Confidence 46788999999999999998888875 79999999741 123567888888778899999999987
Q ss_pred eeeccCChHHHHHHHHhcccCCcEEEEEecC
Q 010086 178 RLEKASKPLDFASEIVRTLKPEGFAVVHVRA 208 (518)
Q Consensus 178 ~l~~~~dp~~~l~Ei~RVLKPGG~lvi~~~~ 208 (518)
++|+.+ ++.|+|||||++++.+..
T Consensus 153 -~~~~~~------~~~~~L~pgG~lv~~~~~ 176 (210)
T 3lbf_A 153 -PPEIPT------ALMTQLDEGGILVLPVGE 176 (210)
T ss_dssp -CSSCCT------HHHHTEEEEEEEEEEECS
T ss_pred -hhhhhH------HHHHhcccCcEEEEEEcC
Confidence 888764 689999999999998864
No 102
>1p91_A Ribosomal RNA large subunit methyltransferase A; RLMA, RRMA, 23S rRNA, NESG, structural genomics, PSI, protein structure initiative; HET: SAM; 2.80A {Escherichia coli} SCOP: c.66.1.33
Probab=99.18 E-value=6.8e-11 Score=115.77 Aligned_cols=87 Identities=18% Similarity=0.248 Sum_probs=71.4
Q ss_pred CCCCeEEEEcCCCCHhHHHHHhc-CCCcEEEEecCCC----------CCcEEeccCCCCCCCCCceeEEEEcCceeeccC
Q 010086 115 SQSAKSLCVETQYGQDVFALKEI-GVEDSIGIFKKSS----------KPLVISGEGHRIPFDGNTFDFVFVGGARLEKAS 183 (518)
Q Consensus 115 ~~~~rvLDVGcGtG~~~~~L~~~-g~~~v~gID~s~~----------~~l~~~~da~~LPf~D~SFD~V~s~~~~l~~~~ 183 (518)
.++.+|||||||+|..+..+.+. +..+++|+|+++. ...+..+|++++|+++++||+|++..+ .
T Consensus 84 ~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~-~---- 158 (269)
T 1p91_A 84 DKATAVLDIGCGEGYYTHAFADALPEITTFGLDVSKVAIKAAAKRYPQVTFCVASSHRLPFSDTSMDAIIRIYA-P---- 158 (269)
T ss_dssp TTCCEEEEETCTTSTTHHHHHHTCTTSEEEEEESCHHHHHHHHHHCTTSEEEECCTTSCSBCTTCEEEEEEESC-C----
T ss_pred CCCCEEEEECCCCCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHhCCCcEEEEcchhhCCCCCCceeEEEEeCC-h----
Confidence 57889999999999999888775 2369999999742 234678899999999999999998764 2
Q ss_pred ChHHHHHHHHhcccCCcEEEEEecCC
Q 010086 184 KPLDFASEIVRTLKPEGFAVVHVRAK 209 (518)
Q Consensus 184 dp~~~l~Ei~RVLKPGG~lvi~~~~~ 209 (518)
.+++|+.|+|||||.+++.+...
T Consensus 159 ---~~l~~~~~~L~pgG~l~~~~~~~ 181 (269)
T 1p91_A 159 ---CKAEELARVVKPGGWVITATPGP 181 (269)
T ss_dssp ---CCHHHHHHHEEEEEEEEEEEECT
T ss_pred ---hhHHHHHHhcCCCcEEEEEEcCH
Confidence 24899999999999999876543
No 103
>3fpf_A Mtnas, putative uncharacterized protein; thermonicotianamine, nicotianamine, biosynthetic protein; HET: TNA MTA; 1.66A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 3fpe_A* 3fph_A* 3fpg_A* 3fpj_A* 3o31_A*
Probab=99.18 E-value=6.3e-11 Score=120.21 Aligned_cols=92 Identities=16% Similarity=0.122 Sum_probs=72.3
Q ss_pred cCCCCCCCeEEEEcCCCCHhH-HHHHhcCCCcEEEEecCCC---------------CCcEEeccCCCCCCCCCceeEEEE
Q 010086 111 EGYLSQSAKSLCVETQYGQDV-FALKEIGVEDSIGIFKKSS---------------KPLVISGEGHRIPFDGNTFDFVFV 174 (518)
Q Consensus 111 ~gll~~~~rvLDVGcGtG~~~-~~L~~~g~~~v~gID~s~~---------------~~l~~~~da~~LPf~D~SFD~V~s 174 (518)
..-++++.+|||||||+|..+ ..+++....+|+|||+++. ...++++|+.++| +++||+|++
T Consensus 117 la~l~~g~rVLDIGcG~G~~ta~~lA~~~ga~V~gIDis~~~l~~Ar~~~~~~gl~~v~~v~gDa~~l~--d~~FDvV~~ 194 (298)
T 3fpf_A 117 LGRFRRGERAVFIGGGPLPLTGILLSHVYGMRVNVVEIEPDIAELSRKVIEGLGVDGVNVITGDETVID--GLEFDVLMV 194 (298)
T ss_dssp HTTCCTTCEEEEECCCSSCHHHHHHHHTTCCEEEEEESSHHHHHHHHHHHHHHTCCSEEEEESCGGGGG--GCCCSEEEE
T ss_pred HcCCCCcCEEEEECCCccHHHHHHHHHccCCEEEEEECCHHHHHHHHHHHHhcCCCCeEEEECchhhCC--CCCcCEEEE
Confidence 345789999999999998655 4455532379999999841 1235688998876 899999998
Q ss_pred cCceeeccCChHHHHHHHHhcccCCcEEEEEecC
Q 010086 175 GGARLEKASKPLDFASEIVRTLKPEGFAVVHVRA 208 (518)
Q Consensus 175 ~~~~l~~~~dp~~~l~Ei~RVLKPGG~lvi~~~~ 208 (518)
.. + ++++.++++|+.|+|||||++++...+
T Consensus 195 ~a--~--~~d~~~~l~el~r~LkPGG~Lvv~~~~ 224 (298)
T 3fpf_A 195 AA--L--AEPKRRVFRNIHRYVDTETRIIYRTYT 224 (298)
T ss_dssp CT--T--CSCHHHHHHHHHHHCCTTCEEEEEECC
T ss_pred CC--C--ccCHHHHHHHHHHHcCCCcEEEEEcCc
Confidence 65 3 478899999999999999999997643
No 104
>3q7e_A Protein arginine N-methyltransferase 1; HET: SAH; 2.20A {Rattus norvegicus} PDB: 1orh_A* 1ori_A* 1or8_A*
Probab=99.18 E-value=5e-11 Score=122.88 Aligned_cols=91 Identities=19% Similarity=0.129 Sum_probs=75.7
Q ss_pred CCCCCeEEEEcCCCCHhHHHHHhcCCCcEEEEecCCC-------------C--CcEEeccCCCCCCCCCceeEEEEcCc-
Q 010086 114 LSQSAKSLCVETQYGQDVFALKEIGVEDSIGIFKKSS-------------K--PLVISGEGHRIPFDGNTFDFVFVGGA- 177 (518)
Q Consensus 114 l~~~~rvLDVGcGtG~~~~~L~~~g~~~v~gID~s~~-------------~--~l~~~~da~~LPf~D~SFD~V~s~~~- 177 (518)
+.++.+|||||||+|..+..+++.|..+|+|+|+++. . ..++.+|.+++|+++++||+|++...
T Consensus 64 ~~~~~~VLDvGcG~G~~~~~la~~g~~~v~gvD~s~~l~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~Iis~~~~ 143 (349)
T 3q7e_A 64 LFKDKVVLDVGSGTGILCMFAAKAGARKVIGIECSSISDYAVKIVKANKLDHVVTIIKGKVEEVELPVEKVDIIISEWMG 143 (349)
T ss_dssp HHTTCEEEEESCTTSHHHHHHHHTTCSEEEEEECSTHHHHHHHHHHHTTCTTTEEEEESCTTTCCCSSSCEEEEEECCCB
T ss_pred cCCCCEEEEEeccchHHHHHHHHCCCCEEEEECcHHHHHHHHHHHHHcCCCCcEEEEECcHHHccCCCCceEEEEEcccc
Confidence 3578899999999999999998888679999999840 1 24578999999999999999999642
Q ss_pred -eeeccCChHHHHHHHHhcccCCcEEEE
Q 010086 178 -RLEKASKPLDFASEIVRTLKPEGFAVV 204 (518)
Q Consensus 178 -~l~~~~dp~~~l~Ei~RVLKPGG~lvi 204 (518)
.+++..++..++.++.|+|||||+++.
T Consensus 144 ~~l~~~~~~~~~l~~~~r~LkpgG~li~ 171 (349)
T 3q7e_A 144 YCLFYESMLNTVLHARDKWLAPDGLIFP 171 (349)
T ss_dssp BTBTBTCCHHHHHHHHHHHEEEEEEEES
T ss_pred ccccCchhHHHHHHHHHHhCCCCCEEcc
Confidence 144556788999999999999999874
No 105
>3hp7_A Hemolysin, putative; structural genomics, APC64019, PSI-2, protein STR initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.53A {Streptococcus thermophilus}
Probab=99.18 E-value=6.2e-11 Score=119.98 Aligned_cols=91 Identities=10% Similarity=-0.006 Sum_probs=69.2
Q ss_pred CCCCCCCeEEEEcCCCCHhHHHHHhcCCCcEEEEecCCCC--------CcEE---eccCCCCC---CCCCceeEEEEcCc
Q 010086 112 GYLSQSAKSLCVETQYGQDVFALKEIGVEDSIGIFKKSSK--------PLVI---SGEGHRIP---FDGNTFDFVFVGGA 177 (518)
Q Consensus 112 gll~~~~rvLDVGcGtG~~~~~L~~~g~~~v~gID~s~~~--------~l~~---~~da~~LP---f~D~SFD~V~s~~~ 177 (518)
++-.++.+|||||||||.++..|.+.|..+|+|||+++.. +.+. ..++..++ +++.+||+|++..+
T Consensus 81 ~~~~~g~~vLDiGcGTG~~t~~L~~~ga~~V~aVDvs~~mL~~a~r~~~rv~~~~~~ni~~l~~~~l~~~~fD~v~~d~s 160 (291)
T 3hp7_A 81 NLSVEDMITIDIGASTGGFTDVMLQNGAKLVYAVDVGTNQLVWKLRQDDRVRSMEQYNFRYAEPVDFTEGLPSFASIDVS 160 (291)
T ss_dssp TCCCTTCEEEEETCTTSHHHHHHHHTTCSEEEEECSSSSCSCHHHHTCTTEEEECSCCGGGCCGGGCTTCCCSEEEECCS
T ss_pred CCCccccEEEecCCCccHHHHHHHhCCCCEEEEEECCHHHHHHHHHhCcccceecccCceecchhhCCCCCCCEEEEEee
Confidence 3334678999999999999988888887799999998631 1111 23444444 45667999999776
Q ss_pred eeeccCChHHHHHHHHhcccCCcEEEEEe
Q 010086 178 RLEKASKPLDFASEIVRTLKPEGFAVVHV 206 (518)
Q Consensus 178 ~l~~~~dp~~~l~Ei~RVLKPGG~lvi~~ 206 (518)
|++ ...++.|+.|+|||||.+++.+
T Consensus 161 -f~s---l~~vL~e~~rvLkpGG~lv~lv 185 (291)
T 3hp7_A 161 -FIS---LNLILPALAKILVDGGQVVALV 185 (291)
T ss_dssp -SSC---GGGTHHHHHHHSCTTCEEEEEE
T ss_pred -Hhh---HHHHHHHHHHHcCcCCEEEEEE
Confidence 775 4678999999999999998874
No 106
>1jsx_A Glucose-inhibited division protein B; methyltransferase fold, structural genomics, PSI, protein structure initiative; 2.40A {Escherichia coli} SCOP: c.66.1.20
Probab=99.17 E-value=2.9e-10 Score=106.62 Aligned_cols=106 Identities=12% Similarity=-0.024 Sum_probs=80.8
Q ss_pred CCCeEEEEcCCCCHhHHHHHhc-CCCcEEEEecCCC---------------CCcEEeccCCCCCCCCCceeEEEEcCcee
Q 010086 116 QSAKSLCVETQYGQDVFALKEI-GVEDSIGIFKKSS---------------KPLVISGEGHRIPFDGNTFDFVFVGGARL 179 (518)
Q Consensus 116 ~~~rvLDVGcGtG~~~~~L~~~-g~~~v~gID~s~~---------------~~l~~~~da~~LPf~D~SFD~V~s~~~~l 179 (518)
++.+|||+|||+|..+..+++. +..+++|+|+++. ...+..+|..+++ ++++||+|++.. +
T Consensus 65 ~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~-~~~~~D~i~~~~--~ 141 (207)
T 1jsx_A 65 QGERFIDVGTGPGLPGIPLSIVRPEAHFTLLDSLGKRVRFLRQVQHELKLENIEPVQSRVEEFP-SEPPFDGVISRA--F 141 (207)
T ss_dssp CSSEEEEETCTTTTTHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHTTCSSEEEEECCTTTSC-CCSCEEEEECSC--S
T ss_pred CCCeEEEECCCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCeEEEecchhhCC-ccCCcCEEEEec--c
Confidence 4789999999999999888764 3469999999741 1234678888776 678999999864 3
Q ss_pred eccCChHHHHHHHHhcccCCcEEEEEecCCCccCchhHhhhccCccEEEEe
Q 010086 180 EKASKPLDFASEIVRTLKPEGFAVVHVRAKDEYSFNSFLDLFNSCKLVKSR 230 (518)
Q Consensus 180 ~~~~dp~~~l~Ei~RVLKPGG~lvi~~~~~~~~s~~~~~~lf~~~~~v~~~ 230 (518)
.++..+++++.|+|||||++++..+... ...+..+++.|+++.+.
T Consensus 142 ---~~~~~~l~~~~~~L~~gG~l~~~~~~~~---~~~~~~~~~g~~~~~~~ 186 (207)
T 1jsx_A 142 ---ASLNDMVSWCHHLPGEQGRFYALKGQMP---EDEIALLPEEYQVESVV 186 (207)
T ss_dssp ---SSHHHHHHHHTTSEEEEEEEEEEESSCC---HHHHHTSCTTEEEEEEE
T ss_pred ---CCHHHHHHHHHHhcCCCcEEEEEeCCCc---hHHHHHHhcCCceeeee
Confidence 3477899999999999999999865432 24556666678777755
No 107
>1vbf_A 231AA long hypothetical protein-L-isoaspartate O- methyltransferase; trimeric coiled coil assembly; 2.80A {Sulfolobus tokodaii} SCOP: c.66.1.7
Probab=99.14 E-value=1e-10 Score=111.79 Aligned_cols=89 Identities=18% Similarity=0.167 Sum_probs=72.0
Q ss_pred CCCCCCeEEEEcCCCCHhHHHHHhcCCCcEEEEecCCC-------------CCcEEeccCCCCCCCCCceeEEEEcCcee
Q 010086 113 YLSQSAKSLCVETQYGQDVFALKEIGVEDSIGIFKKSS-------------KPLVISGEGHRIPFDGNTFDFVFVGGARL 179 (518)
Q Consensus 113 ll~~~~rvLDVGcGtG~~~~~L~~~g~~~v~gID~s~~-------------~~l~~~~da~~LPf~D~SFD~V~s~~~~l 179 (518)
.+.++.+|||||||+|..+..+.+.+ .+++|+|+++. ...++.+|+.+.+.++++||+|++..+ +
T Consensus 67 ~~~~~~~vLdiG~G~G~~~~~l~~~~-~~v~~vD~~~~~~~~a~~~~~~~~~v~~~~~d~~~~~~~~~~fD~v~~~~~-~ 144 (231)
T 1vbf_A 67 DLHKGQKVLEIGTGIGYYTALIAEIV-DKVVSVEINEKMYNYASKLLSYYNNIKLILGDGTLGYEEEKPYDRVVVWAT-A 144 (231)
T ss_dssp TCCTTCEEEEECCTTSHHHHHHHHHS-SEEEEEESCHHHHHHHHHHHTTCSSEEEEESCGGGCCGGGCCEEEEEESSB-B
T ss_pred CCCCCCEEEEEcCCCCHHHHHHHHHc-CEEEEEeCCHHHHHHHHHHHhhcCCeEEEECCcccccccCCCccEEEECCc-H
Confidence 46788999999999999999888877 79999999741 123567887764335789999999987 8
Q ss_pred eccCChHHHHHHHHhcccCCcEEEEEecCC
Q 010086 180 EKASKPLDFASEIVRTLKPEGFAVVHVRAK 209 (518)
Q Consensus 180 ~~~~dp~~~l~Ei~RVLKPGG~lvi~~~~~ 209 (518)
+|+. .++.|+|||||++++.+...
T Consensus 145 ~~~~------~~~~~~L~pgG~l~~~~~~~ 168 (231)
T 1vbf_A 145 PTLL------CKPYEQLKEGGIMILPIGVG 168 (231)
T ss_dssp SSCC------HHHHHTEEEEEEEEEEECSS
T ss_pred HHHH------HHHHHHcCCCcEEEEEEcCC
Confidence 8874 47999999999999987543
No 108
>1xdz_A Methyltransferase GIDB; MCSG, protein structure initiative, structural genomics, methyltransferase fold, PSI; 1.60A {Bacillus subtilis} SCOP: c.66.1.20
Probab=99.14 E-value=1e-10 Score=113.29 Aligned_cols=88 Identities=10% Similarity=0.023 Sum_probs=71.2
Q ss_pred CCCCeEEEEcCCCCHhHHHHHhc-CCCcEEEEecCCC---------------CCcEEeccCCCCCCC---CCceeEEEEc
Q 010086 115 SQSAKSLCVETQYGQDVFALKEI-GVEDSIGIFKKSS---------------KPLVISGEGHRIPFD---GNTFDFVFVG 175 (518)
Q Consensus 115 ~~~~rvLDVGcGtG~~~~~L~~~-g~~~v~gID~s~~---------------~~l~~~~da~~LPf~---D~SFD~V~s~ 175 (518)
+++.+|||||||+|..+..++.. +..+|+|+|+++. ...++.+|+++++++ +++||+|+|.
T Consensus 69 ~~~~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~fD~V~~~ 148 (240)
T 1xdz_A 69 NQVNTICDVGAGAGFPSLPIKICFPHLHVTIVDSLNKRITFLEKLSEALQLENTTFCHDRAETFGQRKDVRESYDIVTAR 148 (240)
T ss_dssp GGCCEEEEECSSSCTTHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHTCSSEEEEESCHHHHTTCTTTTTCEEEEEEE
T ss_pred CCCCEEEEecCCCCHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCEEEEeccHHHhcccccccCCccEEEEe
Confidence 56789999999999998888752 3368999999841 123568888888875 7899999996
Q ss_pred CceeeccCChHHHHHHHHhcccCCcEEEEEec
Q 010086 176 GARLEKASKPLDFASEIVRTLKPEGFAVVHVR 207 (518)
Q Consensus 176 ~~~l~~~~dp~~~l~Ei~RVLKPGG~lvi~~~ 207 (518)
. + .++..+++++.|+|||||++++..+
T Consensus 149 ~--~---~~~~~~l~~~~~~LkpgG~l~~~~g 175 (240)
T 1xdz_A 149 A--V---ARLSVLSELCLPLVKKNGLFVALKA 175 (240)
T ss_dssp C--C---SCHHHHHHHHGGGEEEEEEEEEEEC
T ss_pred c--c---CCHHHHHHHHHHhcCCCCEEEEEeC
Confidence 5 2 5688999999999999999988754
No 109
>3sso_A Methyltransferase; macrolide, natural product, rossman fold; HET: SAH; 1.90A {Micromonospora griseorubida} PDB: 3ssn_A* 3ssm_A*
Probab=99.13 E-value=3e-11 Score=127.15 Aligned_cols=90 Identities=17% Similarity=0.241 Sum_probs=71.8
Q ss_pred CCCCeEEEEcCC------CCHhHHHH-Hhc-CCCcEEEEecCCC------CCcEEeccCCCCCCC------CCceeEEEE
Q 010086 115 SQSAKSLCVETQ------YGQDVFAL-KEI-GVEDSIGIFKKSS------KPLVISGEGHRIPFD------GNTFDFVFV 174 (518)
Q Consensus 115 ~~~~rvLDVGcG------tG~~~~~L-~~~-g~~~v~gID~s~~------~~l~~~~da~~LPf~------D~SFD~V~s 174 (518)
.++.+||||||| +|..+..+ ++. +..+|+|||+++. ...++++|+.++||. +++||+|+|
T Consensus 215 ~~~~rVLDIGCG~~~~~~TGG~Sl~la~~~fP~a~V~GVDiSp~m~~~~~rI~fv~GDa~dlpf~~~l~~~d~sFDlVis 294 (419)
T 3sso_A 215 NQQVRVLEIGVGGYKHPEWGGGSLRMWKSFFPRGQIYGLDIMDKSHVDELRIRTIQGDQNDAEFLDRIARRYGPFDIVID 294 (419)
T ss_dssp TSCCEEEEECCSCTTCSSCCCHHHHHHHHHCTTCEEEEEESSCCGGGCBTTEEEEECCTTCHHHHHHHHHHHCCEEEEEE
T ss_pred CCCCEEEEEecCCCcCCCCCHHHHHHHHHhCCCCEEEEEECCHHHhhcCCCcEEEEecccccchhhhhhcccCCccEEEE
Confidence 467899999999 55545444 332 3469999999863 123578999999998 899999999
Q ss_pred cCceeeccCChHHHHHHHHhcccCCcEEEEEe
Q 010086 175 GGARLEKASKPLDFASEIVRTLKPEGFAVVHV 206 (518)
Q Consensus 175 ~~~~l~~~~dp~~~l~Ei~RVLKPGG~lvi~~ 206 (518)
.. .|+..++.++++|+.|+|||||++++..
T Consensus 295 dg--sH~~~d~~~aL~el~rvLKPGGvlVi~D 324 (419)
T 3sso_A 295 DG--SHINAHVRTSFAALFPHVRPGGLYVIED 324 (419)
T ss_dssp CS--CCCHHHHHHHHHHHGGGEEEEEEEEEEC
T ss_pred CC--cccchhHHHHHHHHHHhcCCCeEEEEEe
Confidence 75 5777778899999999999999999964
No 110
>3r0q_C Probable protein arginine N-methyltransferase 4.2; arginine methyltransferase, methylation; HET: SAH; 2.61A {Arabidopsis thaliana}
Probab=99.13 E-value=1e-10 Score=121.75 Aligned_cols=98 Identities=18% Similarity=0.080 Sum_probs=76.3
Q ss_pred HHHHcCCCCCCCeEEEEcCCCCHhHHHHHhcCCCcEEEEecCCC---------------CCcEEeccCCCCCCCCCceeE
Q 010086 107 DLISEGYLSQSAKSLCVETQYGQDVFALKEIGVEDSIGIFKKSS---------------KPLVISGEGHRIPFDGNTFDF 171 (518)
Q Consensus 107 ~L~~~gll~~~~rvLDVGcGtG~~~~~L~~~g~~~v~gID~s~~---------------~~l~~~~da~~LPf~D~SFD~ 171 (518)
.+.....+.++.+|||||||+|..+..+++.|..+|+|+|+++. ...++.+|+++++++ ++||+
T Consensus 54 ~i~~~~~~~~~~~VLDlGcGtG~ls~~la~~g~~~V~gvD~s~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~-~~~D~ 132 (376)
T 3r0q_C 54 AVFQNKHHFEGKTVLDVGTGSGILAIWSAQAGARKVYAVEATKMADHARALVKANNLDHIVEVIEGSVEDISLP-EKVDV 132 (376)
T ss_dssp HHHTTTTTTTTCEEEEESCTTTHHHHHHHHTTCSEEEEEESSTTHHHHHHHHHHTTCTTTEEEEESCGGGCCCS-SCEEE
T ss_pred HHHhccccCCCCEEEEeccCcCHHHHHHHhcCCCEEEEEccHHHHHHHHHHHHHcCCCCeEEEEECchhhcCcC-CcceE
Confidence 33344445788999999999999999998888669999999831 123568999999988 89999
Q ss_pred EEEcCc--eeeccCChHHHHHHHHhcccCCcEEEEE
Q 010086 172 VFVGGA--RLEKASKPLDFASEIVRTLKPEGFAVVH 205 (518)
Q Consensus 172 V~s~~~--~l~~~~dp~~~l~Ei~RVLKPGG~lvi~ 205 (518)
|++... .+.+-.++..+++++.|+|||||++++.
T Consensus 133 Iv~~~~~~~l~~e~~~~~~l~~~~~~LkpgG~li~~ 168 (376)
T 3r0q_C 133 IISEWMGYFLLRESMFDSVISARDRWLKPTGVMYPS 168 (376)
T ss_dssp EEECCCBTTBTTTCTHHHHHHHHHHHEEEEEEEESS
T ss_pred EEEcChhhcccchHHHHHHHHHHHhhCCCCeEEEEe
Confidence 999552 1222245778999999999999998764
No 111
>3hm2_A Precorrin-6Y C5,15-methyltransferase; alpha-beta-sandwich, structural genomics, PSI-2, protein structure initiative; 2.21A {Corynebacterium diphtheriae}
Probab=99.12 E-value=1.2e-10 Score=106.18 Aligned_cols=90 Identities=10% Similarity=0.045 Sum_probs=69.1
Q ss_pred CCCCCCeEEEEcCCCCHhHHHHHhc-CCCcEEEEecCCC--------------C-CcEEeccCC-CCCCCCCceeEEEEc
Q 010086 113 YLSQSAKSLCVETQYGQDVFALKEI-GVEDSIGIFKKSS--------------K-PLVISGEGH-RIPFDGNTFDFVFVG 175 (518)
Q Consensus 113 ll~~~~rvLDVGcGtG~~~~~L~~~-g~~~v~gID~s~~--------------~-~l~~~~da~-~LPf~D~SFD~V~s~ 175 (518)
.++++.+|||+|||+|..+..+++. +..+++|+|+++. + ...+.+|+. .+|..+++||+|++.
T Consensus 22 ~~~~~~~vldiG~G~G~~~~~l~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~D~i~~~ 101 (178)
T 3hm2_A 22 APKPHETLWDIGGGSGSIAIEWLRSTPQTTAVCFEISEERRERILSNAINLGVSDRIAVQQGAPRAFDDVPDNPDVIFIG 101 (178)
T ss_dssp CCCTTEEEEEESTTTTHHHHHHHTTSSSEEEEEECSCHHHHHHHHHHHHTTTCTTSEEEECCTTGGGGGCCSCCSEEEEC
T ss_pred cccCCCeEEEeCCCCCHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHHHHhCCCCCEEEecchHhhhhccCCCCCEEEEC
Confidence 3578889999999999999888765 3479999999741 1 124566663 344444899999998
Q ss_pred CceeeccCChHHHHHHHHhcccCCcEEEEEec
Q 010086 176 GARLEKASKPLDFASEIVRTLKPEGFAVVHVR 207 (518)
Q Consensus 176 ~~~l~~~~dp~~~l~Ei~RVLKPGG~lvi~~~ 207 (518)
.. ++| ..+++++.|+|||||++++...
T Consensus 102 ~~-~~~----~~~l~~~~~~L~~gG~l~~~~~ 128 (178)
T 3hm2_A 102 GG-LTA----PGVFAAAWKRLPVGGRLVANAV 128 (178)
T ss_dssp C--TTC----TTHHHHHHHTCCTTCEEEEEEC
T ss_pred Cc-ccH----HHHHHHHHHhcCCCCEEEEEee
Confidence 86 766 5789999999999999998753
No 112
>3e05_A Precorrin-6Y C5,15-methyltransferase (decarboxyla; porphyrin metabolism, S-adenosyl-methionine; 1.80A {Geobacter metallireducens} SCOP: c.66.1.0
Probab=99.12 E-value=3.2e-10 Score=106.58 Aligned_cols=91 Identities=14% Similarity=0.085 Sum_probs=72.9
Q ss_pred CCCCCCeEEEEcCCCCHhHHHHHhcC-CCcEEEEecCCC---------------CCcEEeccCCCCCCCCCceeEEEEcC
Q 010086 113 YLSQSAKSLCVETQYGQDVFALKEIG-VEDSIGIFKKSS---------------KPLVISGEGHRIPFDGNTFDFVFVGG 176 (518)
Q Consensus 113 ll~~~~rvLDVGcGtG~~~~~L~~~g-~~~v~gID~s~~---------------~~l~~~~da~~LPf~D~SFD~V~s~~ 176 (518)
.++++.+|||+|||+|..+..+++.+ ..+++|+|+++. ...++.+|+.+.....++||+|++..
T Consensus 37 ~~~~~~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~~D~i~~~~ 116 (204)
T 3e05_A 37 RLQDDLVMWDIGAGSASVSIEASNLMPNGRIFALERNPQYLGFIRDNLKKFVARNVTLVEAFAPEGLDDLPDPDRVFIGG 116 (204)
T ss_dssp TCCTTCEEEEETCTTCHHHHHHHHHCTTSEEEEEECCHHHHHHHHHHHHHHTCTTEEEEECCTTTTCTTSCCCSEEEESC
T ss_pred CCCCCCEEEEECCCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeCChhhhhhcCCCCCEEEECC
Confidence 46788999999999999998888764 469999999741 12346788766554557899999987
Q ss_pred ceeeccCChHHHHHHHHhcccCCcEEEEEec
Q 010086 177 ARLEKASKPLDFASEIVRTLKPEGFAVVHVR 207 (518)
Q Consensus 177 ~~l~~~~dp~~~l~Ei~RVLKPGG~lvi~~~ 207 (518)
. ++ ++..+++++.|+|||||++++...
T Consensus 117 ~-~~---~~~~~l~~~~~~LkpgG~l~~~~~ 143 (204)
T 3e05_A 117 S-GG---MLEEIIDAVDRRLKSEGVIVLNAV 143 (204)
T ss_dssp C-TT---CHHHHHHHHHHHCCTTCEEEEEEC
T ss_pred C-Cc---CHHHHHHHHHHhcCCCeEEEEEec
Confidence 5 44 688999999999999999998753
No 113
>2ipx_A RRNA 2'-O-methyltransferase fibrillarin; FBL, structural genomics, structural genomics consortium, SGC; HET: MTA; 1.82A {Homo sapiens}
Probab=99.12 E-value=1.7e-10 Score=111.04 Aligned_cols=122 Identities=15% Similarity=0.122 Sum_probs=83.8
Q ss_pred CCCCCCeEEEEcCCCCHhHHHHHhc-C-CCcEEEEecCCC-------------CCcEEeccCCC---CCCCCCceeEEEE
Q 010086 113 YLSQSAKSLCVETQYGQDVFALKEI-G-VEDSIGIFKKSS-------------KPLVISGEGHR---IPFDGNTFDFVFV 174 (518)
Q Consensus 113 ll~~~~rvLDVGcGtG~~~~~L~~~-g-~~~v~gID~s~~-------------~~l~~~~da~~---LPf~D~SFD~V~s 174 (518)
.++++.+|||+|||+|..+..|++. | ..+|+|+|+++. ...++.+|+.+ +|+.+++||+|++
T Consensus 74 ~~~~~~~vLDlG~G~G~~~~~la~~~g~~~~v~gvD~s~~~i~~~~~~a~~~~~v~~~~~d~~~~~~~~~~~~~~D~V~~ 153 (233)
T 2ipx_A 74 HIKPGAKVLYLGAASGTTVSHVSDIVGPDGLVYAVEFSHRSGRDLINLAKKRTNIIPVIEDARHPHKYRMLIAMVDVIFA 153 (233)
T ss_dssp CCCTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEECCCHHHHHHHHHHHHHCTTEEEECSCTTCGGGGGGGCCCEEEEEE
T ss_pred cCCCCCEEEEEcccCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHhhccCCeEEEEcccCChhhhcccCCcEEEEEE
Confidence 4678899999999999999888764 2 368999999831 12345788876 6777899999999
Q ss_pred cCceeeccCCh-HHHHHHHHhcccCCcEEEEEecCCC--c-cCch----hHhhhcc--CccEEEEeccCCCCCC
Q 010086 175 GGARLEKASKP-LDFASEIVRTLKPEGFAVVHVRAKD--E-YSFN----SFLDLFN--SCKLVKSRDIDGIDSS 238 (518)
Q Consensus 175 ~~~~l~~~~dp-~~~l~Ei~RVLKPGG~lvi~~~~~~--~-~s~~----~~~~lf~--~~~~v~~~~v~~~~~~ 238 (518)
... . ++. ..++.++.|+|||||++++.+.... . .... .-.+++. .|+++....++.|..+
T Consensus 154 ~~~---~-~~~~~~~~~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~~~~~~~~~ 223 (233)
T 2ipx_A 154 DVA---Q-PDQTRIVALNAHTFLRNGGHFVISIKANCIDSTASAEAVFASEVKKMQQENMKPQEQLTLEPYERD 223 (233)
T ss_dssp CCC---C-TTHHHHHHHHHHHHEEEEEEEEEEEEHHHHCSSSCHHHHHHHHHHTTGGGTEEEEEEEECTTTSSS
T ss_pred cCC---C-ccHHHHHHHHHHHHcCCCeEEEEEEcccccccCCCHHHHHHHHHHHHHHCCCceEEEEecCCccCC
Confidence 542 2 222 3458899999999999999754311 0 0000 0023333 4788887777766543
No 114
>1g6q_1 HnRNP arginine N-methyltransferase; SAM-binding domain, beta-barrel, mixed alpha-beta, hexamer; 2.90A {Saccharomyces cerevisiae} SCOP: c.66.1.6
Probab=99.12 E-value=1.9e-10 Score=117.46 Aligned_cols=90 Identities=16% Similarity=0.015 Sum_probs=74.0
Q ss_pred CCCCeEEEEcCCCCHhHHHHHhcCCCcEEEEecCCC---------------CCcEEeccCCCCCCCCCceeEEEEcCc--
Q 010086 115 SQSAKSLCVETQYGQDVFALKEIGVEDSIGIFKKSS---------------KPLVISGEGHRIPFDGNTFDFVFVGGA-- 177 (518)
Q Consensus 115 ~~~~rvLDVGcGtG~~~~~L~~~g~~~v~gID~s~~---------------~~l~~~~da~~LPf~D~SFD~V~s~~~-- 177 (518)
.++.+|||||||+|..+..+++.|..+|+|+|+++. ...++.+|++++++++++||+|++...
T Consensus 37 ~~~~~VLDiGcGtG~ls~~la~~g~~~v~~vD~s~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~D~Ivs~~~~~ 116 (328)
T 1g6q_1 37 FKDKIVLDVGCGTGILSMFAAKHGAKHVIGVDMSSIIEMAKELVELNGFSDKITLLRGKLEDVHLPFPKVDIIISEWMGY 116 (328)
T ss_dssp HTTCEEEEETCTTSHHHHHHHHTCCSEEEEEESSTHHHHHHHHHHHTTCTTTEEEEESCTTTSCCSSSCEEEEEECCCBT
T ss_pred cCCCEEEEecCccHHHHHHHHHCCCCEEEEEChHHHHHHHHHHHHHcCCCCCEEEEECchhhccCCCCcccEEEEeCchh
Confidence 467899999999999998888888679999999831 123568999999999999999999742
Q ss_pred eeeccCChHHHHHHHHhcccCCcEEEE
Q 010086 178 RLEKASKPLDFASEIVRTLKPEGFAVV 204 (518)
Q Consensus 178 ~l~~~~dp~~~l~Ei~RVLKPGG~lvi 204 (518)
.+.+...+..++.++.|+|||||+++.
T Consensus 117 ~l~~~~~~~~~l~~~~~~LkpgG~li~ 143 (328)
T 1g6q_1 117 FLLYESMMDTVLYARDHYLVEGGLIFP 143 (328)
T ss_dssp TBSTTCCHHHHHHHHHHHEEEEEEEES
T ss_pred hcccHHHHHHHHHHHHhhcCCCeEEEE
Confidence 145556678899999999999999873
No 115
>3lpm_A Putative methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium, nysgxrc; 2.40A {Listeria monocytogenes}
Probab=99.11 E-value=3e-10 Score=111.46 Aligned_cols=133 Identities=13% Similarity=0.043 Sum_probs=86.8
Q ss_pred CC-CCCeEEEEcCCCCHhHHHHHhcCCCcEEEEecCCC----------------CCcEEeccCCCCC--CCCCceeEEEE
Q 010086 114 LS-QSAKSLCVETQYGQDVFALKEIGVEDSIGIFKKSS----------------KPLVISGEGHRIP--FDGNTFDFVFV 174 (518)
Q Consensus 114 l~-~~~rvLDVGcGtG~~~~~L~~~g~~~v~gID~s~~----------------~~l~~~~da~~LP--f~D~SFD~V~s 174 (518)
++ ++.+|||+|||+|..+..+++.+..+++|+|+++. ...++.+|+.+++ +++++||+|++
T Consensus 46 ~~~~~~~vLDlG~G~G~~~~~la~~~~~~v~gvDi~~~~~~~a~~n~~~~~~~~~v~~~~~D~~~~~~~~~~~~fD~Ii~ 125 (259)
T 3lpm_A 46 LPIRKGKIIDLCSGNGIIPLLLSTRTKAKIVGVEIQERLADMAKRSVAYNQLEDQIEIIEYDLKKITDLIPKERADIVTC 125 (259)
T ss_dssp CCSSCCEEEETTCTTTHHHHHHHTTCCCEEEEECCSHHHHHHHHHHHHHTTCTTTEEEECSCGGGGGGTSCTTCEEEEEE
T ss_pred CCCCCCEEEEcCCchhHHHHHHHHhcCCcEEEEECCHHHHHHHHHHHHHCCCcccEEEEECcHHHhhhhhccCCccEEEE
Confidence 56 78999999999999999888876559999999741 1235678888875 67899999999
Q ss_pred cCceeec-----cC---------------ChHHHHHHHHhcccCCcEEEEEecCCCccCchhHhhhcc--CccEEEEecc
Q 010086 175 GGARLEK-----AS---------------KPLDFASEIVRTLKPEGFAVVHVRAKDEYSFNSFLDLFN--SCKLVKSRDI 232 (518)
Q Consensus 175 ~~~~l~~-----~~---------------dp~~~l~Ei~RVLKPGG~lvi~~~~~~~~s~~~~~~lf~--~~~~v~~~~v 232 (518)
+-. +.+ .. +...+++++.|+|||||++++...... ...+..+++ .+....+..+
T Consensus 126 npP-y~~~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~---~~~~~~~l~~~~~~~~~~~~v 201 (259)
T 3lpm_A 126 NPP-YFATPDTSLKNTNEHFRIARHEVMCTLEDTIRVAASLLKQGGKANFVHRPER---LLDIIDIMRKYRLEPKRIQFV 201 (259)
T ss_dssp CCC-C-----------------------HHHHHHHHHHHHHEEEEEEEEEEECTTT---HHHHHHHHHHTTEEEEEEEEE
T ss_pred CCC-CCCCccccCCCCchHHHhhhccccCCHHHHHHHHHHHccCCcEEEEEEcHHH---HHHHHHHHHHCCCceEEEEEe
Confidence 643 211 11 124689999999999999998764322 233433333 3455554444
Q ss_pred CCCCCCccceeEEEEeec
Q 010086 233 DGIDSSLPYIREIVLKKE 250 (518)
Q Consensus 233 ~~~~~~~p~~~~vv~kK~ 250 (518)
-....+-+..-.+..+|.
T Consensus 202 ~~~~~~~~~~~l~~~~k~ 219 (259)
T 3lpm_A 202 HPRSDREANTVLVEGIKD 219 (259)
T ss_dssp ESSTTSCCSEEEEEEEET
T ss_pred ecCCCCCcEEEEEEEEeC
Confidence 332222223334455553
No 116
>3id6_C Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; C/D guide RNA, 2'-O-methylation, coiled-coil, methyltransfer binding, rRNA processing; HET: SAM; 2.60A {Sulfolobus solfataricus} SCOP: c.66.1.0 PDB: 3id5_B* 3pla_E*
Probab=99.11 E-value=1.8e-10 Score=112.95 Aligned_cols=130 Identities=14% Similarity=0.123 Sum_probs=84.6
Q ss_pred CCCCCCeEEEEcCCCCHhHHHHHhc-C-CCcEEEEecCCC-------------CCcEEeccCCCCC---CCCCceeEEEE
Q 010086 113 YLSQSAKSLCVETQYGQDVFALKEI-G-VEDSIGIFKKSS-------------KPLVISGEGHRIP---FDGNTFDFVFV 174 (518)
Q Consensus 113 ll~~~~rvLDVGcGtG~~~~~L~~~-g-~~~v~gID~s~~-------------~~l~~~~da~~LP---f~D~SFD~V~s 174 (518)
.+++|.+|||+|||+|..+..+++. | .+.|+|+|+++. ....+.+|+...+ ..+++||+|++
T Consensus 73 ~l~~g~~VLDlG~GtG~~t~~la~~v~~~G~V~avD~s~~~l~~l~~~a~~r~nv~~i~~Da~~~~~~~~~~~~~D~I~~ 152 (232)
T 3id6_C 73 PIRKGTKVLYLGAASGTTISHVSDIIELNGKAYGVEFSPRVVRELLLVAQRRPNIFPLLADARFPQSYKSVVENVDVLYV 152 (232)
T ss_dssp SCCTTCEEEEETCTTSHHHHHHHHHHTTTSEEEEEECCHHHHHHHHHHHHHCTTEEEEECCTTCGGGTTTTCCCEEEEEE
T ss_pred CCCCCCEEEEEeecCCHHHHHHHHHhCCCCEEEEEECcHHHHHHHHHHhhhcCCeEEEEcccccchhhhccccceEEEEe
Confidence 3689999999999999999888763 3 469999999852 1124578877542 22579999999
Q ss_pred cCceeeccCChHHHH-HHHHhcccCCcEEEEEecCCC---c-----cCchhHhhhc-cCccEEEEeccCCCCCCccceeE
Q 010086 175 GGARLEKASKPLDFA-SEIVRTLKPEGFAVVHVRAKD---E-----YSFNSFLDLF-NSCKLVKSRDIDGIDSSLPYIRE 244 (518)
Q Consensus 175 ~~~~l~~~~dp~~~l-~Ei~RVLKPGG~lvi~~~~~~---~-----~s~~~~~~lf-~~~~~v~~~~v~~~~~~~p~~~~ 244 (518)
..+ + ++..+.+ ..+.|+|||||.+++.+.... + ........|- ..|+++....+.+|+.. ++ .
T Consensus 153 d~a-~---~~~~~il~~~~~~~LkpGG~lvisik~~~~d~t~~~~e~~~~~~~~L~~~gf~~~~~~~l~p~~~~--h~-~ 225 (232)
T 3id6_C 153 DIA-Q---PDQTDIAIYNAKFFLKVNGDMLLVIKARSIDVTKDPKEIYKTEVEKLENSNFETIQIINLDPYDKD--HA-I 225 (232)
T ss_dssp CCC-C---TTHHHHHHHHHHHHEEEEEEEEEEEC-------CCSSSSTTHHHHHHHHTTEEEEEEEECTTTCSS--CE-E
T ss_pred cCC-C---hhHHHHHHHHHHHhCCCCeEEEEEEccCCcccCCCHHHHHHHHHHHHHHCCCEEEEEeccCCCcCc--eE-E
Confidence 764 3 3444444 556669999999998753221 1 1111122221 35889998888887543 33 3
Q ss_pred EEEee
Q 010086 245 IVLKK 249 (518)
Q Consensus 245 vv~kK 249 (518)
++.+|
T Consensus 226 v~~~~ 230 (232)
T 3id6_C 226 VLSKY 230 (232)
T ss_dssp EEEEE
T ss_pred EEEEe
Confidence 45554
No 117
>2esr_A Methyltransferase; structural genomics, hypothetical protein, streptococcus PYO PSI, protein structure initiative; HET: GLC; 1.80A {Streptococcus pyogenes} SCOP: c.66.1.46
Probab=99.10 E-value=5.6e-11 Score=108.94 Aligned_cols=111 Identities=14% Similarity=0.116 Sum_probs=78.7
Q ss_pred CCCCCeEEEEcCCCCHhHHHHHhcCCCcEEEEecCCC----------------CCcEEeccCCC-CCCCCCceeEEEEcC
Q 010086 114 LSQSAKSLCVETQYGQDVFALKEIGVEDSIGIFKKSS----------------KPLVISGEGHR-IPFDGNTFDFVFVGG 176 (518)
Q Consensus 114 l~~~~rvLDVGcGtG~~~~~L~~~g~~~v~gID~s~~----------------~~l~~~~da~~-LPf~D~SFD~V~s~~ 176 (518)
..++.+|||+|||+|..+..+.+.+..+++|+|+++. ...++.+|+.+ +|..+++||+|++..
T Consensus 29 ~~~~~~vLDlGcG~G~~~~~l~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~fD~i~~~~ 108 (177)
T 2esr_A 29 YFNGGRVLDLFAGSGGLAIEAVSRGMSAAVLVEKNRKAQAIIQDNIIMTKAENRFTLLKMEAERAIDCLTGRFDLVFLDP 108 (177)
T ss_dssp CCCSCEEEEETCTTCHHHHHHHHTTCCEEEEECCCHHHHHHHHHHHHTTTCGGGEEEECSCHHHHHHHBCSCEEEEEECC
T ss_pred hcCCCeEEEeCCCCCHHHHHHHHcCCCEEEEEECCHHHHHHHHHHHHHcCCCCceEEEECcHHHhHHhhcCCCCEEEECC
Confidence 4577899999999999998888777679999999741 12245677766 465567899999976
Q ss_pred ceeeccCChHHHHHHHH--hcccCCcEEEEEecCCCccCchhHhhhccCccEEEEec
Q 010086 177 ARLEKASKPLDFASEIV--RTLKPEGFAVVHVRAKDEYSFNSFLDLFNSCKLVKSRD 231 (518)
Q Consensus 177 ~~l~~~~dp~~~l~Ei~--RVLKPGG~lvi~~~~~~~~s~~~~~~lf~~~~~v~~~~ 231 (518)
. ++. ......++.+. |+|||||++++....... +.....++.+...++
T Consensus 109 ~-~~~-~~~~~~~~~l~~~~~L~~gG~l~~~~~~~~~-----~~~~~~~~~~~~~~~ 158 (177)
T 2esr_A 109 P-YAK-ETIVATIEALAAKNLLSEQVMVVCETDKTVL-----LPKEIATLGIWKEKI 158 (177)
T ss_dssp S-SHH-HHHHHHHHHHHHTTCEEEEEEEEEEEETTCC-----CCSEETTEEEEEEEE
T ss_pred C-CCc-chHHHHHHHHHhCCCcCCCcEEEEEECCccc-----cccccCceEEEEeee
Confidence 4 432 23456677776 999999999998754432 112335566666555
No 118
>3htx_A HEN1; HEN1, small RNA methyltransferase, protein-RNA complex; HET: SAH; 3.10A {Arabidopsis thaliana}
Probab=99.10 E-value=1.2e-10 Score=131.36 Aligned_cols=91 Identities=12% Similarity=0.137 Sum_probs=76.9
Q ss_pred CCCCeEEEEcCCCCHhHHHHHhcCC--CcEEEEecCCC---------------------CCcEEeccCCCCCCCCCceeE
Q 010086 115 SQSAKSLCVETQYGQDVFALKEIGV--EDSIGIFKKSS---------------------KPLVISGEGHRIPFDGNTFDF 171 (518)
Q Consensus 115 ~~~~rvLDVGcGtG~~~~~L~~~g~--~~v~gID~s~~---------------------~~l~~~~da~~LPf~D~SFD~ 171 (518)
.++.+|||||||+|..+..|++.+. .+|+|||+++. ...++++|+.++|+++++||+
T Consensus 720 ~~g~rVLDVGCGTG~lai~LAr~g~p~a~VtGVDIS~emLe~AReRLa~~lnAkr~gl~nVefiqGDa~dLp~~d~sFDl 799 (950)
T 3htx_A 720 SSASTLVDFGCGSGSLLDSLLDYPTSLQTIIGVDISPKGLARAAKMLHVKLNKEACNVKSATLYDGSILEFDSRLHDVDI 799 (950)
T ss_dssp SCCSEEEEETCSSSHHHHHHTSSCCCCCEEEEEESCHHHHHHHHHHHHHHTTTTCSSCSEEEEEESCTTSCCTTSCSCCE
T ss_pred cCCCEEEEECCCCCHHHHHHHHhCCCCCeEEEEECCHHHHHHHHHHhhhccchhhcCCCceEEEECchHhCCcccCCeeE
Confidence 3778999999999999999988752 69999999841 022568999999999999999
Q ss_pred EEEcCceeeccCChH--HHHHHHHhcccCCcEEEEEec
Q 010086 172 VFVGGARLEKASKPL--DFASEIVRTLKPEGFAVVHVR 207 (518)
Q Consensus 172 V~s~~~~l~~~~dp~--~~l~Ei~RVLKPGG~lvi~~~ 207 (518)
|++..+ ++|++++. .+++++.|+|||| .+++.+.
T Consensus 800 VV~~eV-LeHL~dp~l~~~L~eI~RvLKPG-~LIISTP 835 (950)
T 3htx_A 800 GTCLEV-IEHMEEDQACEFGEKVLSLFHPK-LLIVSTP 835 (950)
T ss_dssp EEEESC-GGGSCHHHHHHHHHHHHHTTCCS-EEEEEEC
T ss_pred EEEeCc-hhhCChHHHHHHHHHHHHHcCCC-EEEEEec
Confidence 999998 99999876 4899999999999 7666654
No 119
>3grz_A L11 mtase, ribosomal protein L11 methyltransferase; methylase, SAM-binding domain, PSI-2, nysgxrc; 2.00A {Lactobacillus delbrueckii subsp}
Probab=99.10 E-value=1.8e-10 Score=108.17 Aligned_cols=112 Identities=13% Similarity=0.061 Sum_probs=82.8
Q ss_pred CCCCCeEEEEcCCCCHhHHHHHhcCCCcEEEEecCCC---------------CCcEEeccCCCCCCCCCceeEEEEcCce
Q 010086 114 LSQSAKSLCVETQYGQDVFALKEIGVEDSIGIFKKSS---------------KPLVISGEGHRIPFDGNTFDFVFVGGAR 178 (518)
Q Consensus 114 l~~~~rvLDVGcGtG~~~~~L~~~g~~~v~gID~s~~---------------~~l~~~~da~~LPf~D~SFD~V~s~~~~ 178 (518)
++++.+|||+|||+|..+..+++.+..+++|+|+++. ...+..+|..+ +.+++||+|++...
T Consensus 58 ~~~~~~vLDiG~G~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~--~~~~~fD~i~~~~~- 134 (205)
T 3grz_A 58 MVKPLTVADVGTGSGILAIAAHKLGAKSVLATDISDESMTAAEENAALNGIYDIALQKTSLLA--DVDGKFDLIVANIL- 134 (205)
T ss_dssp CSSCCEEEEETCTTSHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHTTCCCCEEEESSTTT--TCCSCEEEEEEESC-
T ss_pred ccCCCEEEEECCCCCHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEeccccc--cCCCCceEEEECCc-
Confidence 4678999999999999998888887679999999741 13355677654 55799999999886
Q ss_pred eeccCChHHHHHHHHhcccCCcEEEEEecCCCccCchhHhhhc--cCccEEEEeccC
Q 010086 179 LEKASKPLDFASEIVRTLKPEGFAVVHVRAKDEYSFNSFLDLF--NSCKLVKSRDID 233 (518)
Q Consensus 179 l~~~~dp~~~l~Ei~RVLKPGG~lvi~~~~~~~~s~~~~~~lf--~~~~~v~~~~v~ 233 (518)
+++ ...+++++.|+|||||++++...... +...+..++ ..|+++.....+
T Consensus 135 ~~~---~~~~l~~~~~~L~~gG~l~~~~~~~~--~~~~~~~~~~~~Gf~~~~~~~~~ 186 (205)
T 3grz_A 135 AEI---LLDLIPQLDSHLNEDGQVIFSGIDYL--QLPKIEQALAENSFQIDLKMRAG 186 (205)
T ss_dssp HHH---HHHHGGGSGGGEEEEEEEEEEEEEGG--GHHHHHHHHHHTTEEEEEEEEET
T ss_pred HHH---HHHHHHHHHHhcCCCCEEEEEecCcc--cHHHHHHHHHHcCCceEEeeccC
Confidence 665 46789999999999999988632221 123444443 357777777654
No 120
>2y1w_A Histone-arginine methyltransferase CARM1; histone modification; HET: SFG 849; 2.10A {Homo sapiens} PDB: 2y1x_A* 3b3f_A* 3b3g_A 2v74_B* 2v7e_A
Probab=99.10 E-value=1.2e-10 Score=119.83 Aligned_cols=91 Identities=15% Similarity=0.111 Sum_probs=73.7
Q ss_pred CCCCCeEEEEcCCCCHhHHHHHhcCCCcEEEEecCCC---------------CCcEEeccCCCCCCCCCceeEEEEcCce
Q 010086 114 LSQSAKSLCVETQYGQDVFALKEIGVEDSIGIFKKSS---------------KPLVISGEGHRIPFDGNTFDFVFVGGAR 178 (518)
Q Consensus 114 l~~~~rvLDVGcGtG~~~~~L~~~g~~~v~gID~s~~---------------~~l~~~~da~~LPf~D~SFD~V~s~~~~ 178 (518)
+.++.+|||||||+|..+..+++.|..+|+|+|+++. ...++.+|.++++++ ++||+|++...
T Consensus 48 ~~~~~~VLDiGcGtG~ls~~la~~g~~~V~~vD~s~~~~~a~~~~~~~~l~~~v~~~~~d~~~~~~~-~~~D~Ivs~~~- 125 (348)
T 2y1w_A 48 DFKDKIVLDVGCGSGILSFFAAQAGARKIYAVEASTMAQHAEVLVKSNNLTDRIVVIPGKVEEVSLP-EQVDIIISEPM- 125 (348)
T ss_dssp GTTTCEEEEETCTTSHHHHHHHHTTCSEEEEEECSTHHHHHHHHHHHTTCTTTEEEEESCTTTCCCS-SCEEEEEECCC-
T ss_pred cCCcCEEEEcCCCccHHHHHHHhCCCCEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcchhhCCCC-CceeEEEEeCc-
Confidence 4578899999999999998888877679999999841 123568899998877 68999999875
Q ss_pred eeccCC--hHHHHHHHHhcccCCcEEEEEe
Q 010086 179 LEKASK--PLDFASEIVRTLKPEGFAVVHV 206 (518)
Q Consensus 179 l~~~~d--p~~~l~Ei~RVLKPGG~lvi~~ 206 (518)
++|+.+ ....+.++.|+|||||++++..
T Consensus 126 ~~~~~~~~~~~~l~~~~~~LkpgG~li~~~ 155 (348)
T 2y1w_A 126 GYMLFNERMLESYLHAKKYLKPSGNMFPTI 155 (348)
T ss_dssp BTTBTTTSHHHHHHHGGGGEEEEEEEESCE
T ss_pred hhcCChHHHHHHHHHHHhhcCCCeEEEEec
Confidence 666653 3578889999999999998653
No 121
>3q87_B N6 adenine specific DNA methylase; SAM-methyltransferase, methyltransferase, methylation, trans activator-transferase complex; HET: SAM; 2.00A {Encephalitozoon cuniculi}
Probab=99.09 E-value=2.4e-10 Score=105.39 Aligned_cols=110 Identities=9% Similarity=0.022 Sum_probs=82.5
Q ss_pred CCCCeEEEEcCCCCHhHHHHHhcCCCcEEEEecCCC------CCcEEeccCCCCCCCCCceeEEEEcCceeeccCCh---
Q 010086 115 SQSAKSLCVETQYGQDVFALKEIGVEDSIGIFKKSS------KPLVISGEGHRIPFDGNTFDFVFVGGARLEKASKP--- 185 (518)
Q Consensus 115 ~~~~rvLDVGcGtG~~~~~L~~~g~~~v~gID~s~~------~~l~~~~da~~LPf~D~SFD~V~s~~~~l~~~~dp--- 185 (518)
.++.+|||+|||+|..+..+++.+ +++|+|+++. ...++++|+.+ |+++++||+|+++.. +++..++
T Consensus 22 ~~~~~vLD~GcG~G~~~~~l~~~~--~v~gvD~s~~~~~~~~~~~~~~~d~~~-~~~~~~fD~i~~n~~-~~~~~~~~~~ 97 (170)
T 3q87_B 22 LEMKIVLDLGTSTGVITEQLRKRN--TVVSTDLNIRALESHRGGNLVRADLLC-SINQESVDVVVFNPP-YVPDTDDPII 97 (170)
T ss_dssp CCSCEEEEETCTTCHHHHHHTTTS--EEEEEESCHHHHHTCSSSCEEECSTTT-TBCGGGCSEEEECCC-CBTTCCCTTT
T ss_pred CCCCeEEEeccCccHHHHHHHhcC--cEEEEECCHHHHhcccCCeEEECChhh-hcccCCCCEEEECCC-CccCCccccc
Confidence 456799999999999999998877 9999999852 23467889887 888899999999876 7765554
Q ss_pred ------HHHHHHHHhcccCCcEEEEEecCCCccCchhHhhhcc--CccEEEEec
Q 010086 186 ------LDFASEIVRTLKPEGFAVVHVRAKDEYSFNSFLDLFN--SCKLVKSRD 231 (518)
Q Consensus 186 ------~~~l~Ei~RVLKPGG~lvi~~~~~~~~s~~~~~~lf~--~~~~v~~~~ 231 (518)
..++.++.+.| |||.+++....... ...+.++++ .|+.+.+..
T Consensus 98 ~~~~~~~~~~~~~~~~l-pgG~l~~~~~~~~~--~~~l~~~l~~~gf~~~~~~~ 148 (170)
T 3q87_B 98 GGGYLGREVIDRFVDAV-TVGMLYLLVIEANR--PKEVLARLEERGYGTRILKV 148 (170)
T ss_dssp BCCGGGCHHHHHHHHHC-CSSEEEEEEEGGGC--HHHHHHHHHHTTCEEEEEEE
T ss_pred cCCcchHHHHHHHHhhC-CCCEEEEEEecCCC--HHHHHHHHHHCCCcEEEEEe
Confidence 57889999999 99999887533221 233444433 456555544
No 122
>2fca_A TRNA (guanine-N(7)-)-methyltransferase; 2.10A {Bacillus subtilis} SCOP: c.66.1.53
Probab=99.09 E-value=1.2e-10 Score=111.44 Aligned_cols=91 Identities=14% Similarity=0.089 Sum_probs=70.6
Q ss_pred CCCeEEEEcCCCCHhHHHHHhc-CCCcEEEEecCCC---------------CCcEEeccCCCCC--CCCCceeEEEEcCc
Q 010086 116 QSAKSLCVETQYGQDVFALKEI-GVEDSIGIFKKSS---------------KPLVISGEGHRIP--FDGNTFDFVFVGGA 177 (518)
Q Consensus 116 ~~~rvLDVGcGtG~~~~~L~~~-g~~~v~gID~s~~---------------~~l~~~~da~~LP--f~D~SFD~V~s~~~ 177 (518)
++.+|||||||+|..+..|++. +..+++|||+++. ...++++|+.+++ |++++||.|++...
T Consensus 38 ~~~~vLDiGcG~G~~~~~la~~~p~~~v~giD~s~~~l~~a~~~~~~~~~~nv~~~~~d~~~l~~~~~~~~~d~v~~~~~ 117 (213)
T 2fca_A 38 DNPIHIEVGTGKGQFISGMAKQNPDINYIGIELFKSVIVTAVQKVKDSEAQNVKLLNIDADTLTDVFEPGEVKRVYLNFS 117 (213)
T ss_dssp CCCEEEEECCTTSHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHSCCSSEEEECCCGGGHHHHCCTTSCCEEEEESC
T ss_pred CCceEEEEecCCCHHHHHHHHHCCCCCEEEEEechHHHHHHHHHHHHcCCCCEEEEeCCHHHHHhhcCcCCcCEEEEECC
Confidence 5789999999999999888775 3368999999841 1235688988887 89999999988653
Q ss_pred eeeccCC--------hHHHHHHHHhcccCCcEEEEEec
Q 010086 178 RLEKASK--------PLDFASEIVRTLKPEGFAVVHVR 207 (518)
Q Consensus 178 ~l~~~~d--------p~~~l~Ei~RVLKPGG~lvi~~~ 207 (518)
..+... ...+++++.|+|||||.+++.+.
T Consensus 118 -~p~~~~~~~~~rl~~~~~l~~~~~~LkpgG~l~~~td 154 (213)
T 2fca_A 118 -DPWPKKRHEKRRLTYSHFLKKYEEVMGKGGSIHFKTD 154 (213)
T ss_dssp -CCCCSGGGGGGSTTSHHHHHHHHHHHTTSCEEEEEES
T ss_pred -CCCcCccccccccCcHHHHHHHHHHcCCCCEEEEEeC
Confidence 222111 24789999999999999999874
No 123
>1yzh_A TRNA (guanine-N(7)-)-methyltransferase; alpha-beta-alpha sandwich, S-adenosylmeth dependent, structural genomics, PSI; 2.02A {Streptococcus pneumoniae} SCOP: c.66.1.53
Probab=99.08 E-value=2.6e-10 Score=108.26 Aligned_cols=92 Identities=15% Similarity=0.134 Sum_probs=72.0
Q ss_pred CCCCeEEEEcCCCCHhHHHHHhcC-CCcEEEEecCCC---------------CCcEEeccCCCCC--CCCCceeEEEEcC
Q 010086 115 SQSAKSLCVETQYGQDVFALKEIG-VEDSIGIFKKSS---------------KPLVISGEGHRIP--FDGNTFDFVFVGG 176 (518)
Q Consensus 115 ~~~~rvLDVGcGtG~~~~~L~~~g-~~~v~gID~s~~---------------~~l~~~~da~~LP--f~D~SFD~V~s~~ 176 (518)
+++.+|||||||+|..+..+++.. ..+++|+|+++. ...++++|+.++| |++++||+|++..
T Consensus 40 ~~~~~vLDiGcG~G~~~~~la~~~p~~~v~gvD~s~~~l~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~D~i~~~~ 119 (214)
T 1yzh_A 40 NDNPIHVEVGSGKGAFVSGMAKQNPDINYIGIDIQKSVLSYALDKVLEVGVPNIKLLWVDGSDLTDYFEDGEIDRLYLNF 119 (214)
T ss_dssp SCCCEEEEESCTTSHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHCCSSEEEEECCSSCGGGTSCTTCCSEEEEES
T ss_pred CCCCeEEEEccCcCHHHHHHHHHCCCCCEEEEEcCHHHHHHHHHHHHHcCCCCEEEEeCCHHHHHhhcCCCCCCEEEEEC
Confidence 467899999999999998887653 368999999741 1235689999888 8999999999976
Q ss_pred ceeeccC--------ChHHHHHHHHhcccCCcEEEEEec
Q 010086 177 ARLEKAS--------KPLDFASEIVRTLKPEGFAVVHVR 207 (518)
Q Consensus 177 ~~l~~~~--------dp~~~l~Ei~RVLKPGG~lvi~~~ 207 (518)
. ..+.. ....+++++.|+|||||++++.+.
T Consensus 120 ~-~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 157 (214)
T 1yzh_A 120 S-DPWPKKRHEKRRLTYKTFLDTFKRILPENGEIHFKTD 157 (214)
T ss_dssp C-CCCCSGGGGGGSTTSHHHHHHHHHHSCTTCEEEEEES
T ss_pred C-CCccccchhhhccCCHHHHHHHHHHcCCCcEEEEEeC
Confidence 4 32221 124789999999999999999764
No 124
>3dxy_A TRNA (guanine-N(7)-)-methyltransferase; rossmann fold methyltransferase, tRNA modification, S-adenosyl-L-methionine, TR processing; HET: SAM; 1.50A {Escherichia coli} PDB: 3dxx_A* 3dxz_A*
Probab=99.08 E-value=7.9e-11 Score=113.61 Aligned_cols=92 Identities=15% Similarity=0.132 Sum_probs=69.8
Q ss_pred CCCCeEEEEcCCCCHhHHHHHhcC-CCcEEEEecCCC---------------CCcEEeccCCCC-C--CCCCceeEEEEc
Q 010086 115 SQSAKSLCVETQYGQDVFALKEIG-VEDSIGIFKKSS---------------KPLVISGEGHRI-P--FDGNTFDFVFVG 175 (518)
Q Consensus 115 ~~~~rvLDVGcGtG~~~~~L~~~g-~~~v~gID~s~~---------------~~l~~~~da~~L-P--f~D~SFD~V~s~ 175 (518)
+++.+|||||||+|..+..+++.. ...++|||+++. ...++++|+.++ | |++++||.|++.
T Consensus 33 ~~~~~vLDiGcG~G~~~~~lA~~~p~~~v~giD~s~~~l~~a~~~~~~~~l~nv~~~~~Da~~~l~~~~~~~~~d~v~~~ 112 (218)
T 3dxy_A 33 REAPVTLEIGFGMGASLVAMAKDRPEQDFLGIEVHSPGVGACLASAHEEGLSNLRVMCHDAVEVLHKMIPDNSLRMVQLF 112 (218)
T ss_dssp SCCCEEEEESCTTCHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHTTCSSEEEECSCHHHHHHHHSCTTCEEEEEEE
T ss_pred CCCCeEEEEeeeChHHHHHHHHHCCCCeEEEEEecHHHHHHHHHHHHHhCCCcEEEEECCHHHHHHHHcCCCChheEEEe
Confidence 367899999999999998888753 358999999841 123467888874 4 899999999997
Q ss_pred CceeeccCCh--------HHHHHHHHhcccCCcEEEEEec
Q 010086 176 GARLEKASKP--------LDFASEIVRTLKPEGFAVVHVR 207 (518)
Q Consensus 176 ~~~l~~~~dp--------~~~l~Ei~RVLKPGG~lvi~~~ 207 (518)
.. ..+.... ..+++++.|+|||||++++.+.
T Consensus 113 ~~-~p~~~~~~~~rr~~~~~~l~~~~r~LkpGG~l~i~td 151 (218)
T 3dxy_A 113 FP-DPWHKARHNKRRIVQVPFAELVKSKLQLGGVFHMATD 151 (218)
T ss_dssp SC-CCCCSGGGGGGSSCSHHHHHHHHHHEEEEEEEEEEES
T ss_pred CC-CCccchhhhhhhhhhHHHHHHHHHHcCCCcEEEEEeC
Confidence 43 2221111 1489999999999999999874
No 125
>2fhp_A Methylase, putative; alpha-beta-alpha sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Enterococcus faecalis} SCOP: c.66.1.46
Probab=99.08 E-value=2e-10 Score=105.53 Aligned_cols=94 Identities=17% Similarity=0.124 Sum_probs=71.5
Q ss_pred CCCCeEEEEcCCCCHhHHHHHhcCCCcEEEEecCCC----------------CCcEEeccCCC----CCCCCCceeEEEE
Q 010086 115 SQSAKSLCVETQYGQDVFALKEIGVEDSIGIFKKSS----------------KPLVISGEGHR----IPFDGNTFDFVFV 174 (518)
Q Consensus 115 ~~~~rvLDVGcGtG~~~~~L~~~g~~~v~gID~s~~----------------~~l~~~~da~~----LPf~D~SFD~V~s 174 (518)
.++.+|||+|||+|..+..+.+.+..+|+|+|+++. ...++.+|+.+ +|+++++||+|++
T Consensus 43 ~~~~~vLD~GcG~G~~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~fD~i~~ 122 (187)
T 2fhp_A 43 FDGGMALDLYSGSGGLAIEAVSRGMDKSICIEKNFAALKVIKENIAITKEPEKFEVRKMDANRALEQFYEEKLQFDLVLL 122 (187)
T ss_dssp CSSCEEEETTCTTCHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHHHHHHHHHHTTCCEEEEEE
T ss_pred cCCCCEEEeCCccCHHHHHHHHcCCCEEEEEECCHHHHHHHHHHHHHhCCCcceEEEECcHHHHHHHHHhcCCCCCEEEE
Confidence 467899999999999998777766679999999741 12345677655 2345889999999
Q ss_pred cCceeeccCChHHHHHHH--HhcccCCcEEEEEecCCC
Q 010086 175 GGARLEKASKPLDFASEI--VRTLKPEGFAVVHVRAKD 210 (518)
Q Consensus 175 ~~~~l~~~~dp~~~l~Ei--~RVLKPGG~lvi~~~~~~ 210 (518)
... ++ ..+....++++ .|+|||||++++......
T Consensus 123 ~~~-~~-~~~~~~~~~~l~~~~~L~~gG~l~~~~~~~~ 158 (187)
T 2fhp_A 123 DPP-YA-KQEIVSQLEKMLERQLLTNEAVIVCETDKTV 158 (187)
T ss_dssp CCC-GG-GCCHHHHHHHHHHTTCEEEEEEEEEEEETTC
T ss_pred CCC-CC-chhHHHHHHHHHHhcccCCCCEEEEEeCCcc
Confidence 875 43 34566777777 999999999999875443
No 126
>3njr_A Precorrin-6Y methylase; methyltransferase, decarboxylase, transferase; HET: SAH PG4; 2.70A {Rhodobacter capsulatus}
Probab=99.07 E-value=5.9e-10 Score=105.95 Aligned_cols=88 Identities=15% Similarity=0.069 Sum_probs=70.3
Q ss_pred CCCCCCeEEEEcCCCCHhHHHHHhcCCCcEEEEecCCC--------------C--CcEEeccCCCCCCCCCceeEEEEcC
Q 010086 113 YLSQSAKSLCVETQYGQDVFALKEIGVEDSIGIFKKSS--------------K--PLVISGEGHRIPFDGNTFDFVFVGG 176 (518)
Q Consensus 113 ll~~~~rvLDVGcGtG~~~~~L~~~g~~~v~gID~s~~--------------~--~l~~~~da~~LPf~D~SFD~V~s~~ 176 (518)
.+.++.+|||+|||+|..+..+++.+ .+|+|+|+++. + ..++.+|+.+.....++||+|++..
T Consensus 52 ~~~~~~~vLDlGcG~G~~~~~la~~~-~~v~~vD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~~~~~~~D~v~~~~ 130 (204)
T 3njr_A 52 APRRGELLWDIGGGSGSVSVEWCLAG-GRAITIEPRADRIENIQKNIDTYGLSPRMRAVQGTAPAALADLPLPEAVFIGG 130 (204)
T ss_dssp CCCTTCEEEEETCTTCHHHHHHHHTT-CEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCTTGGGTTSCCCSEEEECS
T ss_pred CCCCCCEEEEecCCCCHHHHHHHHcC-CEEEEEeCCHHHHHHHHHHHHHcCCCCCEEEEeCchhhhcccCCCCCEEEECC
Confidence 35788999999999999998888775 79999999741 1 2356788887433446899999876
Q ss_pred ceeeccCChHHHHHHHHhcccCCcEEEEEec
Q 010086 177 ARLEKASKPLDFASEIVRTLKPEGFAVVHVR 207 (518)
Q Consensus 177 ~~l~~~~dp~~~l~Ei~RVLKPGG~lvi~~~ 207 (518)
+ + ++. +++++.|+|||||++++...
T Consensus 131 ~-~----~~~-~l~~~~~~LkpgG~lv~~~~ 155 (204)
T 3njr_A 131 G-G----SQA-LYDRLWEWLAPGTRIVANAV 155 (204)
T ss_dssp C-C----CHH-HHHHHHHHSCTTCEEEEEEC
T ss_pred c-c----cHH-HHHHHHHhcCCCcEEEEEec
Confidence 4 4 466 99999999999999998764
No 127
>2ift_A Putative methylase HI0767; NESG, Y767_haein, structural genomics, PSI-2, protein structure initiative; 2.30A {Haemophilus influenzae} SCOP: c.66.1.46
Probab=99.07 E-value=1.5e-10 Score=109.64 Aligned_cols=112 Identities=15% Similarity=0.081 Sum_probs=79.9
Q ss_pred CCCeEEEEcCCCCHhHHHHHhcCCCcEEEEecCCC-----------------CCcEEeccCCCCC--CCCCc-eeEEEEc
Q 010086 116 QSAKSLCVETQYGQDVFALKEIGVEDSIGIFKKSS-----------------KPLVISGEGHRIP--FDGNT-FDFVFVG 175 (518)
Q Consensus 116 ~~~rvLDVGcGtG~~~~~L~~~g~~~v~gID~s~~-----------------~~l~~~~da~~LP--f~D~S-FD~V~s~ 175 (518)
++.+|||+|||+|..+..+...+...|+|+|+++. ...++.+|+.+++ +++++ ||+|++.
T Consensus 53 ~~~~vLDlGcGtG~~~~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~fD~I~~~ 132 (201)
T 2ift_A 53 HQSECLDGFAGSGSLGFEALSRQAKKVTFLELDKTVANQLKKNLQTLKCSSEQAEVINQSSLDFLKQPQNQPHFDVVFLD 132 (201)
T ss_dssp TTCEEEETTCTTCHHHHHHHHTTCSEEEEECSCHHHHHHHHHHHHHTTCCTTTEEEECSCHHHHTTSCCSSCCEEEEEEC
T ss_pred CCCeEEEcCCccCHHHHHHHHccCCEEEEEECCHHHHHHHHHHHHHhCCCccceEEEECCHHHHHHhhccCCCCCEEEEC
Confidence 57899999999999988766666679999999831 1234677876653 24789 9999998
Q ss_pred CceeeccCChHHHHHHH--HhcccCCcEEEEEecCCCccCchhHhhhccCccEEEEeccCCCCCC
Q 010086 176 GARLEKASKPLDFASEI--VRTLKPEGFAVVHVRAKDEYSFNSFLDLFNSCKLVKSRDIDGIDSS 238 (518)
Q Consensus 176 ~~~l~~~~dp~~~l~Ei--~RVLKPGG~lvi~~~~~~~~s~~~~~~lf~~~~~v~~~~v~~~~~~ 238 (518)
.. ++ ..+...+++++ .|+|||||++++...... +..+...+.++..+. |+.+
T Consensus 133 ~~-~~-~~~~~~~l~~~~~~~~LkpgG~l~i~~~~~~------~~~~~~~~~~~~~~~---yG~~ 186 (201)
T 2ift_A 133 PP-FH-FNLAEQAISLLCENNWLKPNALIYVETEKDK------PLITPENWTLLKEKT---TGIV 186 (201)
T ss_dssp CC-SS-SCHHHHHHHHHHHTTCEEEEEEEEEEEESSS------CCCCCTTEEEEEEEE---ETTE
T ss_pred CC-CC-CccHHHHHHHHHhcCccCCCcEEEEEECCCC------CccccchhHHHHHHh---cCCE
Confidence 75 54 45567888999 789999999998765432 112234566666555 5543
No 128
>2p41_A Type II methyltransferase; vizier, viral enzymes involved in replication, dengue virus methyltransferase, structural genomics; HET: G1G SAH CIT; 1.80A {Dengue virus 2} SCOP: c.66.1.25 PDB: 2p1d_A* 1l9k_A* 2p3o_A* 2p3q_A* 2p40_A* 2p3l_A* 1r6a_A*
Probab=99.07 E-value=2.7e-10 Score=115.72 Aligned_cols=96 Identities=10% Similarity=0.039 Sum_probs=70.1
Q ss_pred HHcCCCCCCCeEEEEcCCCCHhHHHHHhcCCCcEEEEec----CCC-------C----C--cEEec-cCCCCCCCCCcee
Q 010086 109 ISEGYLSQSAKSLCVETQYGQDVFALKEIGVEDSIGIFK----KSS-------K----P--LVISG-EGHRIPFDGNTFD 170 (518)
Q Consensus 109 ~~~gll~~~~rvLDVGcGtG~~~~~L~~~g~~~v~gID~----s~~-------~----~--l~~~~-da~~LPf~D~SFD 170 (518)
.+..+++++.+|||||||+|..+..+++. ..|+|||+ ++. . + .++++ |+..+| +++||
T Consensus 75 ~~~~~~~~g~~VLDlGcG~G~~s~~la~~--~~V~gvD~~~~~~~~~~~~~~~~~~~~~~v~~~~~~D~~~l~--~~~fD 150 (305)
T 2p41_A 75 VERNLVTPEGKVVDLGCGRGGWSYYCGGL--KNVREVKGLTKGGPGHEEPIPMSTYGWNLVRLQSGVDVFFIP--PERCD 150 (305)
T ss_dssp HHTTSSCCCEEEEEETCTTSHHHHHHHTS--TTEEEEEEECCCSTTSCCCCCCCSTTGGGEEEECSCCTTTSC--CCCCS
T ss_pred HHcCCCCCCCEEEEEcCCCCHHHHHHHhc--CCEEEEeccccCchhHHHHHHhhhcCCCCeEEEeccccccCC--cCCCC
Confidence 44467788999999999999999988877 48999998 321 0 1 12356 666654 67999
Q ss_pred EEEEcCceee---ccCChH---HHHHHHHhcccCCcEEEEEecCC
Q 010086 171 FVFVGGARLE---KASKPL---DFASEIVRTLKPEGFAVVHVRAK 209 (518)
Q Consensus 171 ~V~s~~~~l~---~~~dp~---~~l~Ei~RVLKPGG~lvi~~~~~ 209 (518)
+|+|..+ ++ +..+.. .++.++.|+|||||.+++.+...
T Consensus 151 ~V~sd~~-~~~g~~~~d~~~~l~~L~~~~~~LkpGG~~v~kv~~~ 194 (305)
T 2p41_A 151 TLLCDIG-ESSPNPTVEAGRTLRVLNLVENWLSNNTQFCVKVLNP 194 (305)
T ss_dssp EEEECCC-CCCSSHHHHHHHHHHHHHHHHHHCCTTCEEEEEESCC
T ss_pred EEEECCc-cccCcchhhHHHHHHHHHHHHHHhCCCCEEEEEeCCC
Confidence 9999764 42 222222 47899999999999998876443
No 129
>2qe6_A Uncharacterized protein TFU_2867; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: NEP SAM; 1.95A {Thermobifida fusca}
Probab=99.07 E-value=6.1e-10 Score=111.09 Aligned_cols=92 Identities=9% Similarity=0.004 Sum_probs=71.3
Q ss_pred CCCeEEEEcCCC---CHhHHHHHhc-CCCcEEEEecCCC-------------CCcEEeccCCCCC-----------CCCC
Q 010086 116 QSAKSLCVETQY---GQDVFALKEI-GVEDSIGIFKKSS-------------KPLVISGEGHRIP-----------FDGN 167 (518)
Q Consensus 116 ~~~rvLDVGcGt---G~~~~~L~~~-g~~~v~gID~s~~-------------~~l~~~~da~~LP-----------f~D~ 167 (518)
...+|||||||+ |..+..+.+. ...+|+|+|+|+. ...++.+|..+.+ ++.+
T Consensus 77 ~~~~vLDlGcG~pt~G~~~~~~~~~~p~~~v~~vD~sp~~l~~Ar~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~d~~ 156 (274)
T 2qe6_A 77 GISQFLDLGSGLPTVQNTHEVAQSVNPDARVVYVDIDPMVLTHGRALLAKDPNTAVFTADVRDPEYILNHPDVRRMIDFS 156 (274)
T ss_dssp CCCEEEEETCCSCCSSCHHHHHHHHCTTCEEEEEESSHHHHHHHHHHHTTCTTEEEEECCTTCHHHHHHSHHHHHHCCTT
T ss_pred CCCEEEEECCCCCCCChHHHHHHHhCCCCEEEEEECChHHHHHHHHhcCCCCCeEEEEeeCCCchhhhccchhhccCCCC
Confidence 347999999999 9887666553 2369999999741 1235677775421 3445
Q ss_pred ceeEEEEcCceeeccCC--hHHHHHHHHhcccCCcEEEEEecC
Q 010086 168 TFDFVFVGGARLEKASK--PLDFASEIVRTLKPEGFAVVHVRA 208 (518)
Q Consensus 168 SFD~V~s~~~~l~~~~d--p~~~l~Ei~RVLKPGG~lvi~~~~ 208 (518)
+||+|++..+ |||+++ +..+++|+.|+|||||++++....
T Consensus 157 ~~d~v~~~~v-lh~~~d~~~~~~l~~~~~~L~pGG~l~i~~~~ 198 (274)
T 2qe6_A 157 RPAAIMLVGM-LHYLSPDVVDRVVGAYRDALAPGSYLFMTSLV 198 (274)
T ss_dssp SCCEEEETTT-GGGSCTTTHHHHHHHHHHHSCTTCEEEEEEEB
T ss_pred CCEEEEEech-hhhCCcHHHHHHHHHHHHhCCCCcEEEEEEec
Confidence 8999999998 999987 789999999999999999987543
No 130
>2pwy_A TRNA (adenine-N(1)-)-methyltransferase; mtase, adoMet, TRMI, tRNA-M1A58; HET: SAH; 1.70A {Thermus thermophilus}
Probab=99.06 E-value=4.3e-10 Score=108.88 Aligned_cols=96 Identities=16% Similarity=0.136 Sum_probs=77.1
Q ss_pred HHHHHcCCCCCCCeEEEEcCCCCHhHHHHHhc-C-CCcEEEEecCCC----------------CCcEEeccCCCCCCCCC
Q 010086 106 QDLISEGYLSQSAKSLCVETQYGQDVFALKEI-G-VEDSIGIFKKSS----------------KPLVISGEGHRIPFDGN 167 (518)
Q Consensus 106 ~~L~~~gll~~~~rvLDVGcGtG~~~~~L~~~-g-~~~v~gID~s~~----------------~~l~~~~da~~LPf~D~ 167 (518)
..++....++++.+|||+|||+|..+..+++. + ..+++++|+++. ...+..+|+.+.|++++
T Consensus 86 ~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~g~~~v~~~~~d~~~~~~~~~ 165 (258)
T 2pwy_A 86 SAMVTLLDLAPGMRVLEAGTGSGGLTLFLARAVGEKGLVESYEARPHHLAQAERNVRAFWQVENVRFHLGKLEEAELEEA 165 (258)
T ss_dssp HHHHHHTTCCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHCCCCCEEEEESCGGGCCCCTT
T ss_pred HHHHHHcCCCCCCEEEEECCCcCHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhcCCCCEEEEECchhhcCCCCC
Confidence 34444445788999999999999999888775 4 479999998731 12346789888899999
Q ss_pred ceeEEEEcCceeeccCChHHHHHHHHhcccCCcEEEEEec
Q 010086 168 TFDFVFVGGARLEKASKPLDFASEIVRTLKPEGFAVVHVR 207 (518)
Q Consensus 168 SFD~V~s~~~~l~~~~dp~~~l~Ei~RVLKPGG~lvi~~~ 207 (518)
+||+|++. .+++..+++++.|+|||||.+++...
T Consensus 166 ~~D~v~~~------~~~~~~~l~~~~~~L~~gG~l~~~~~ 199 (258)
T 2pwy_A 166 AYDGVALD------LMEPWKVLEKAALALKPDRFLVAYLP 199 (258)
T ss_dssp CEEEEEEE------SSCGGGGHHHHHHHEEEEEEEEEEES
T ss_pred CcCEEEEC------CcCHHHHHHHHHHhCCCCCEEEEEeC
Confidence 99999983 35678899999999999999998764
No 131
>3p2e_A 16S rRNA methylase; methyltransferase, transferase, NPMA; HET: SAH; 1.68A {Escherichia coli} PDB: 3p2i_A 3p2k_A* 3pb3_A* 3mte_A*
Probab=99.05 E-value=1.7e-10 Score=111.84 Aligned_cols=92 Identities=15% Similarity=0.092 Sum_probs=66.7
Q ss_pred CCCCCeEEEEcCCCCHhHHHHHhc-CCCcEEEEecCCCCC-------------------cEEeccCCCCCCC-CCceeEE
Q 010086 114 LSQSAKSLCVETQYGQDVFALKEI-GVEDSIGIFKKSSKP-------------------LVISGEGHRIPFD-GNTFDFV 172 (518)
Q Consensus 114 l~~~~rvLDVGcGtG~~~~~L~~~-g~~~v~gID~s~~~~-------------------l~~~~da~~LPf~-D~SFD~V 172 (518)
.+++.+|||||||+|..+..|++. ....|+|||+|+..+ .++++|++++|.. ++.||.|
T Consensus 22 ~~~~~~vLDiGCG~G~~~~~la~~~~~~~v~GvD~s~~~ml~~A~~A~~~~~~~~~~~v~~~~~d~~~l~~~~~d~v~~i 101 (225)
T 3p2e_A 22 GQFDRVHIDLGTGDGRNIYKLAINDQNTFYIGIDPVKENLFDISKKIIKKPSKGGLSNVVFVIAAAESLPFELKNIADSI 101 (225)
T ss_dssp TTCSEEEEEETCTTSHHHHHHHHTCTTEEEEEECSCCGGGHHHHHHHTSCGGGTCCSSEEEECCBTTBCCGGGTTCEEEE
T ss_pred CCCCCEEEEEeccCcHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHHHHHcCCCCeEEEEcCHHHhhhhccCeEEEE
Confidence 467889999999999999888753 336899999993211 2357888888742 3667777
Q ss_pred EEcCceee-----ccCChHHHHHHHHhcccCCcEEEEEe
Q 010086 173 FVGGARLE-----KASKPLDFASEIVRTLKPEGFAVVHV 206 (518)
Q Consensus 173 ~s~~~~l~-----~~~dp~~~l~Ei~RVLKPGG~lvi~~ 206 (518)
.+... .. ...++..+++|+.|+|||||.+++.+
T Consensus 102 ~~~~~-~~~~~~~~~~~~~~~l~~~~r~LkpGG~l~i~~ 139 (225)
T 3p2e_A 102 SILFP-WGTLLEYVIKPNRDILSNVADLAKKEAHFEFVT 139 (225)
T ss_dssp EEESC-CHHHHHHHHTTCHHHHHHHHTTEEEEEEEEEEE
T ss_pred EEeCC-CcHHhhhhhcchHHHHHHHHHhcCCCcEEEEEE
Confidence 76542 11 12344578999999999999998844
No 132
>3ckk_A TRNA (guanine-N(7)-)-methyltransferase; mettl1, S-adenosyl-L-methionine, tRNA Pro structural genomics, structural genomics consortium, SGC; HET: SAM; 1.55A {Homo sapiens}
Probab=99.05 E-value=2.7e-10 Score=111.16 Aligned_cols=94 Identities=11% Similarity=0.085 Sum_probs=69.2
Q ss_pred CCCCCeEEEEcCCCCHhHHHHHhcC-CCcEEEEecCCC-------------------C--CcEEeccCCC-CC--CCCCc
Q 010086 114 LSQSAKSLCVETQYGQDVFALKEIG-VEDSIGIFKKSS-------------------K--PLVISGEGHR-IP--FDGNT 168 (518)
Q Consensus 114 l~~~~rvLDVGcGtG~~~~~L~~~g-~~~v~gID~s~~-------------------~--~l~~~~da~~-LP--f~D~S 168 (518)
..++.+|||||||+|..+..|++.. ...++|||+++. . ..++++|+.. +| |++++
T Consensus 44 ~~~~~~vLDiGcG~G~~~~~la~~~p~~~v~GiDis~~~l~~A~~~~~~l~~~~~~~~~nv~~~~~d~~~~l~~~~~~~~ 123 (235)
T 3ckk_A 44 AQAQVEFADIGCGYGGLLVELSPLFPDTLILGLEIRVKVSDYVQDRIRALRAAPAGGFQNIACLRSNAMKHLPNFFYKGQ 123 (235)
T ss_dssp --CCEEEEEETCTTCHHHHHHGGGSTTSEEEEEESCHHHHHHHHHHHHHHHHSTTCCCTTEEEEECCTTTCHHHHCCTTC
T ss_pred cCCCCeEEEEccCCcHHHHHHHHHCCCCeEEEEECCHHHHHHHHHHHHHHHHHHhcCCCeEEEEECcHHHhhhhhCCCcC
Confidence 4567799999999999998888753 468999999731 1 1256889887 78 89999
Q ss_pred eeEEEEcCceeeccCC--------hHHHHHHHHhcccCCcEEEEEecC
Q 010086 169 FDFVFVGGARLEKASK--------PLDFASEIVRTLKPEGFAVVHVRA 208 (518)
Q Consensus 169 FD~V~s~~~~l~~~~d--------p~~~l~Ei~RVLKPGG~lvi~~~~ 208 (518)
||.|++... -.|... ...+++++.|+|||||.+++.+..
T Consensus 124 ~D~v~~~~~-dp~~k~~h~krr~~~~~~l~~~~~~LkpGG~l~~~td~ 170 (235)
T 3ckk_A 124 LTKMFFLFP-DPHFKRTKHKWRIISPTLLAEYAYVLRVGGLVYTITDV 170 (235)
T ss_dssp EEEEEEESC-C-----------CCCHHHHHHHHHHEEEEEEEEEEESC
T ss_pred eeEEEEeCC-CchhhhhhhhhhhhhHHHHHHHHHHCCCCCEEEEEeCC
Confidence 999987542 222110 136899999999999999998743
No 133
>2ld4_A Anamorsin; methyltransferase-like fold, alpha/beta fold, iron-sulfur PR biogenesis, apoptosis; NMR {Homo sapiens} PDB: 2yui_A
Probab=99.03 E-value=7.4e-11 Score=108.39 Aligned_cols=82 Identities=15% Similarity=0.163 Sum_probs=63.0
Q ss_pred CCCCCeEEEEcCCCCHh--HHH-HH--hcCCCcEEEEecCCCCCcEEeccCCCCCC---CCCceeEEEEcCceeecc-CC
Q 010086 114 LSQSAKSLCVETQYGQD--VFA-LK--EIGVEDSIGIFKKSSKPLVISGEGHRIPF---DGNTFDFVFVGGARLEKA-SK 184 (518)
Q Consensus 114 l~~~~rvLDVGcGtG~~--~~~-L~--~~g~~~v~gID~s~~~~l~~~~da~~LPf---~D~SFD~V~s~~~~l~~~-~d 184 (518)
+++|.+|||||||+... +.. +. +.... ....+..+|++++|+ ++++||+|++..+ +||+ ++
T Consensus 10 ~~~g~~vL~~~~g~v~vD~s~~ml~~a~~~~~---------~~~~~~~~d~~~~~~~~~~~~~fD~V~~~~~-l~~~~~~ 79 (176)
T 2ld4_A 10 ISAGQFVAVVWDKSSPVEALKGLVDKLQALTG---------NEGRVSVENIKQLLQSAHKESSFDIILSGLV-PGSTTLH 79 (176)
T ss_dssp CCTTSEEEEEECTTSCHHHHHHHHHHHHHHTT---------TTSEEEEEEGGGGGGGCCCSSCEEEEEECCS-TTCCCCC
T ss_pred CCCCCEEEEecCCceeeeCCHHHHHHHHHhcc---------cCcEEEEechhcCccccCCCCCEeEEEECCh-hhhcccC
Confidence 68899999999997431 111 11 11000 013456788888887 8999999999887 9999 89
Q ss_pred hHHHHHHHHhcccCCcEEEEE
Q 010086 185 PLDFASEIVRTLKPEGFAVVH 205 (518)
Q Consensus 185 p~~~l~Ei~RVLKPGG~lvi~ 205 (518)
+.++++|++|+|||||++++.
T Consensus 80 ~~~~l~~~~r~LkpgG~l~~~ 100 (176)
T 2ld4_A 80 SAEILAEIARILRPGGCLFLK 100 (176)
T ss_dssp CHHHHHHHHHHEEEEEEEEEE
T ss_pred HHHHHHHHHHHCCCCEEEEEE
Confidence 999999999999999999885
No 134
>3lst_A CALO1 methyltransferase; calicheamicin, enediyne, SAH, STRU genomics, PSI-2, protein structure initiative; HET: SAH; 2.40A {Micromonospora echinospora}
Probab=99.03 E-value=7.8e-10 Score=113.31 Aligned_cols=96 Identities=11% Similarity=0.036 Sum_probs=74.2
Q ss_pred HHHHcCCCCCCCeEEEEcCCCCHhHHHHHhc-CCCcEEEEecCCC-------------CCcEEeccCCCCCCCCCceeEE
Q 010086 107 DLISEGYLSQSAKSLCVETQYGQDVFALKEI-GVEDSIGIFKKSS-------------KPLVISGEGHRIPFDGNTFDFV 172 (518)
Q Consensus 107 ~L~~~gll~~~~rvLDVGcGtG~~~~~L~~~-g~~~v~gID~s~~-------------~~l~~~~da~~LPf~D~SFD~V 172 (518)
.+.+..-++++.+|||||||+|..+..+.+. +..+++++|++.. ...++.+|.. .|+| +||+|
T Consensus 175 ~~~~~~~~~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~~~~~~~~~~~~~~~~~~v~~~~~d~~-~~~p--~~D~v 251 (348)
T 3lst_A 175 ILARAGDFPATGTVADVGGGRGGFLLTVLREHPGLQGVLLDRAEVVARHRLDAPDVAGRWKVVEGDFL-REVP--HADVH 251 (348)
T ss_dssp HHHHHSCCCSSEEEEEETCTTSHHHHHHHHHCTTEEEEEEECHHHHTTCCCCCGGGTTSEEEEECCTT-TCCC--CCSEE
T ss_pred HHHHhCCccCCceEEEECCccCHHHHHHHHHCCCCEEEEecCHHHhhcccccccCCCCCeEEEecCCC-CCCC--CCcEE
Confidence 3444444677889999999999999888764 3357899997410 1124577775 4555 89999
Q ss_pred EEcCceeeccCCh--HHHHHHHHhcccCCcEEEEEe
Q 010086 173 FVGGARLEKASKP--LDFASEIVRTLKPEGFAVVHV 206 (518)
Q Consensus 173 ~s~~~~l~~~~dp--~~~l~Ei~RVLKPGG~lvi~~ 206 (518)
++..+ +||++++ .++++++.|+|||||++++..
T Consensus 252 ~~~~v-lh~~~d~~~~~~L~~~~~~LkpgG~l~i~e 286 (348)
T 3lst_A 252 VLKRI-LHNWGDEDSVRILTNCRRVMPAHGRVLVID 286 (348)
T ss_dssp EEESC-GGGSCHHHHHHHHHHHHHTCCTTCEEEEEE
T ss_pred EEehh-ccCCCHHHHHHHHHHHHHhcCCCCEEEEEE
Confidence 99998 9999988 589999999999999998863
No 135
>4dzr_A Protein-(glutamine-N5) methyltransferase, release specific; structural genomics, PSI-biology; 2.55A {Alicyclobacillus acidocaldarius subsp}
Probab=99.03 E-value=1.9e-10 Score=107.42 Aligned_cols=92 Identities=8% Similarity=-0.060 Sum_probs=65.1
Q ss_pred CCCCeEEEEcCCCCHhHHHHHhcC-CCcEEEEecCCCC--------------CcEEeccCCCCCCCC-----CceeEEEE
Q 010086 115 SQSAKSLCVETQYGQDVFALKEIG-VEDSIGIFKKSSK--------------PLVISGEGHRIPFDG-----NTFDFVFV 174 (518)
Q Consensus 115 ~~~~rvLDVGcGtG~~~~~L~~~g-~~~v~gID~s~~~--------------~l~~~~da~~LPf~D-----~SFD~V~s 174 (518)
.++.+|||+|||+|..+..+++.+ ..+++|+|+++.. ..++++|+.+ ++++ ++||+|++
T Consensus 29 ~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~d~~~-~~~~~~~~~~~fD~i~~ 107 (215)
T 4dzr_A 29 PSGTRVIDVGTGSGCIAVSIALACPGVSVTAVDLSMDALAVARRNAERFGAVVDWAAADGIE-WLIERAERGRPWHAIVS 107 (215)
T ss_dssp CTTEEEEEEESSBCHHHHHHHHHCTTEEEEEEECC-------------------CCHHHHHH-HHHHHHHTTCCBSEEEE
T ss_pred CCCCEEEEecCCHhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHHhCCceEEEEcchHh-hhhhhhhccCcccEEEE
Confidence 678899999999999998888764 3599999998531 1133566665 6776 99999999
Q ss_pred cCceee------ccCCh--------------------HHHHHHHHhcccCCcE-EEEEecC
Q 010086 175 GGARLE------KASKP--------------------LDFASEIVRTLKPEGF-AVVHVRA 208 (518)
Q Consensus 175 ~~~~l~------~~~dp--------------------~~~l~Ei~RVLKPGG~-lvi~~~~ 208 (518)
... ++ ++... ..+++++.|+|||||+ +++.+..
T Consensus 108 npp-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 167 (215)
T 4dzr_A 108 NPP-YIPTGEIDQLEPSVRDYEPRLALDGGEDGLQFYRRMAALPPYVLARGRAGVFLEVGH 167 (215)
T ss_dssp CCC-CCC------------------------CTTHHHHHHHTCCGGGBCSSSEEEEEECTT
T ss_pred CCC-CCCCccccccChhhhccCccccccCCCcHHHHHHHHHHHHHHHhcCCCeEEEEEECC
Confidence 643 22 21111 5778999999999999 6666643
No 136
>2yxe_A Protein-L-isoaspartate O-methyltransferase; rossman-type fold, alpha/beta/alpha sandwich structure, STRU genomics, NPPSFA; 2.00A {Methanocaldococcus jannaschii}
Probab=99.03 E-value=6.6e-10 Score=104.95 Aligned_cols=89 Identities=22% Similarity=0.256 Sum_probs=69.2
Q ss_pred CCCCCCeEEEEcCCCCHhHHHHHhcC-C-CcEEEEecCCC---------------CCcEEeccCCCCCCC-CCceeEEEE
Q 010086 113 YLSQSAKSLCVETQYGQDVFALKEIG-V-EDSIGIFKKSS---------------KPLVISGEGHRIPFD-GNTFDFVFV 174 (518)
Q Consensus 113 ll~~~~rvLDVGcGtG~~~~~L~~~g-~-~~v~gID~s~~---------------~~l~~~~da~~LPf~-D~SFD~V~s 174 (518)
.+.++.+|||||||+|..+..+.+.+ . .+++|+|+++. ...+..+|... +++ +++||+|++
T Consensus 74 ~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~~~-~~~~~~~fD~v~~ 152 (215)
T 2yxe_A 74 DLKPGMKVLEIGTGCGYHAAVTAEIVGEDGLVVSIERIPELAEKAERTLRKLGYDNVIVIVGDGTL-GYEPLAPYDRIYT 152 (215)
T ss_dssp TCCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHTCTTEEEEESCGGG-CCGGGCCEEEEEE
T ss_pred CCCCCCEEEEECCCccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCeEEEECCccc-CCCCCCCeeEEEE
Confidence 46788999999999999998887753 2 68999998741 12245667643 444 789999999
Q ss_pred cCceeeccCChHHHHHHHHhcccCCcEEEEEecCC
Q 010086 175 GGARLEKASKPLDFASEIVRTLKPEGFAVVHVRAK 209 (518)
Q Consensus 175 ~~~~l~~~~dp~~~l~Ei~RVLKPGG~lvi~~~~~ 209 (518)
..+ ++|+. .++.|+|||||++++.+...
T Consensus 153 ~~~-~~~~~------~~~~~~L~pgG~lv~~~~~~ 180 (215)
T 2yxe_A 153 TAA-GPKIP------EPLIRQLKDGGKLLMPVGRY 180 (215)
T ss_dssp SSB-BSSCC------HHHHHTEEEEEEEEEEESSS
T ss_pred CCc-hHHHH------HHHHHHcCCCcEEEEEECCC
Confidence 987 88875 48999999999999987543
No 137
>3i53_A O-methyltransferase; CO-complex, rossmann-like fold; HET: SAH; 2.08A {Streptomyces carzinostaticus subsp} PDB: 3i58_A* 3i5u_A* 3i64_A*
Probab=99.03 E-value=1.1e-09 Score=111.12 Aligned_cols=90 Identities=11% Similarity=0.011 Sum_probs=71.3
Q ss_pred CCCCCeEEEEcCCCCHhHHHHHhc-CCCcEEEEecCC---------------CCCcEEeccCCCCCCCCCceeEEEEcCc
Q 010086 114 LSQSAKSLCVETQYGQDVFALKEI-GVEDSIGIFKKS---------------SKPLVISGEGHRIPFDGNTFDFVFVGGA 177 (518)
Q Consensus 114 l~~~~rvLDVGcGtG~~~~~L~~~-g~~~v~gID~s~---------------~~~l~~~~da~~LPf~D~SFD~V~s~~~ 177 (518)
+++..+|||||||+|..+..+.+. +..+++++|+.. ....++.+|.. .|+|. +||+|++.++
T Consensus 167 ~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~~~~~~~a~~~~~~~~~~~~v~~~~~d~~-~~~p~-~~D~v~~~~v 244 (332)
T 3i53_A 167 WAALGHVVDVGGGSGGLLSALLTAHEDLSGTVLDLQGPASAAHRRFLDTGLSGRAQVVVGSFF-DPLPA-GAGGYVLSAV 244 (332)
T ss_dssp CGGGSEEEEETCTTSHHHHHHHHHCTTCEEEEEECHHHHHHHHHHHHHTTCTTTEEEEECCTT-SCCCC-SCSEEEEESC
T ss_pred CCCCCEEEEeCCChhHHHHHHHHHCCCCeEEEecCHHHHHHHHHhhhhcCcCcCeEEecCCCC-CCCCC-CCcEEEEehh
Confidence 345689999999999999888763 335899999721 01234577776 46776 8999999998
Q ss_pred eeeccCCh--HHHHHHHHhcccCCcEEEEEe
Q 010086 178 RLEKASKP--LDFASEIVRTLKPEGFAVVHV 206 (518)
Q Consensus 178 ~l~~~~dp--~~~l~Ei~RVLKPGG~lvi~~ 206 (518)
+||++++ .++++++.|+|||||++++..
T Consensus 245 -lh~~~~~~~~~~l~~~~~~L~pgG~l~i~e 274 (332)
T 3i53_A 245 -LHDWDDLSAVAILRRCAEAAGSGGVVLVIE 274 (332)
T ss_dssp -GGGSCHHHHHHHHHHHHHHHTTTCEEEEEE
T ss_pred -hccCCHHHHHHHHHHHHHhcCCCCEEEEEe
Confidence 9999886 689999999999999998863
No 138
>1l3i_A Precorrin-6Y methyltransferase/putative decarboxylase; structural genomics, beta barrel, rossmann fold, tetramer; HET: SAH; 1.95A {Methanothermobacterthermautotrophicus} SCOP: c.66.1.22 PDB: 1kxz_A 1l3b_A 1f38_A 1l3c_A*
Probab=99.03 E-value=3.9e-10 Score=103.16 Aligned_cols=88 Identities=17% Similarity=0.188 Sum_probs=70.2
Q ss_pred CCCCCeEEEEcCCCCHhHHHHHhcCCCcEEEEecCCC----------------CCcEEeccCCCCCCCC-CceeEEEEcC
Q 010086 114 LSQSAKSLCVETQYGQDVFALKEIGVEDSIGIFKKSS----------------KPLVISGEGHRIPFDG-NTFDFVFVGG 176 (518)
Q Consensus 114 l~~~~rvLDVGcGtG~~~~~L~~~g~~~v~gID~s~~----------------~~l~~~~da~~LPf~D-~SFD~V~s~~ 176 (518)
+.++.+|||+|||+|..+..+.+.+ .+++|+|+++. ...+..+|..+ ++++ ++||+|++..
T Consensus 31 ~~~~~~vldiG~G~G~~~~~l~~~~-~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~-~~~~~~~~D~v~~~~ 108 (192)
T 1l3i_A 31 PGKNDVAVDVGCGTGGVTLELAGRV-RRVYAIDRNPEAISTTEMNLQRHGLGDNVTLMEGDAPE-ALCKIPDIDIAVVGG 108 (192)
T ss_dssp CCTTCEEEEESCTTSHHHHHHHTTS-SEEEEEESCHHHHHHHHHHHHHTTCCTTEEEEESCHHH-HHTTSCCEEEEEESC
T ss_pred CCCCCEEEEECCCCCHHHHHHHHhc-CEEEEEECCHHHHHHHHHHHHHcCCCcceEEEecCHHH-hcccCCCCCEEEECC
Confidence 5788999999999999998888877 89999999741 11245666655 4444 6899999987
Q ss_pred ceeeccCChHHHHHHHHhcccCCcEEEEEec
Q 010086 177 ARLEKASKPLDFASEIVRTLKPEGFAVVHVR 207 (518)
Q Consensus 177 ~~l~~~~dp~~~l~Ei~RVLKPGG~lvi~~~ 207 (518)
. +++ ...+++++.|+|||||.+++...
T Consensus 109 ~-~~~---~~~~l~~~~~~l~~gG~l~~~~~ 135 (192)
T 1l3i_A 109 S-GGE---LQEILRIIKDKLKPGGRIIVTAI 135 (192)
T ss_dssp C-TTC---HHHHHHHHHHTEEEEEEEEEEEC
T ss_pred c-hHH---HHHHHHHHHHhcCCCcEEEEEec
Confidence 5 554 67899999999999999988754
No 139
>1dl5_A Protein-L-isoaspartate O-methyltransferase; isoaspartyl residues, protein repair, deamidation, post-translational modification; HET: SAH; 1.80A {Thermotoga maritima} SCOP: c.66.1.7 d.197.1.1
Probab=99.02 E-value=4.6e-10 Score=113.81 Aligned_cols=88 Identities=14% Similarity=0.191 Sum_probs=71.5
Q ss_pred CCCCCCeEEEEcCCCCHhHHHHHhcCC--CcEEEEecCCC---------------CCcEEeccCCCCCCCCCceeEEEEc
Q 010086 113 YLSQSAKSLCVETQYGQDVFALKEIGV--EDSIGIFKKSS---------------KPLVISGEGHRIPFDGNTFDFVFVG 175 (518)
Q Consensus 113 ll~~~~rvLDVGcGtG~~~~~L~~~g~--~~v~gID~s~~---------------~~l~~~~da~~LPf~D~SFD~V~s~ 175 (518)
.++++.+|||||||+|..+..+++.+. .+|+|+|+++. ...++.+|..+.+.++++||+|++.
T Consensus 72 ~~~~~~~VLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~g~~~v~~~~~d~~~~~~~~~~fD~Iv~~ 151 (317)
T 1dl5_A 72 GLDKGMRVLEIGGGTGYNAAVMSRVVGEKGLVVSVEYSRKICEIAKRNVERLGIENVIFVCGDGYYGVPEFSPYDVIFVT 151 (317)
T ss_dssp TCCTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCGGGCCGGGCCEEEEEEC
T ss_pred CCCCcCEEEEecCCchHHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHHcCCCCeEEEECChhhccccCCCeEEEEEc
Confidence 467899999999999999988877542 35999999741 1234678888876678899999999
Q ss_pred CceeeccCChHHHHHHHHhcccCCcEEEEEec
Q 010086 176 GARLEKASKPLDFASEIVRTLKPEGFAVVHVR 207 (518)
Q Consensus 176 ~~~l~~~~dp~~~l~Ei~RVLKPGG~lvi~~~ 207 (518)
.. ++|+. +++.|+|||||++++.+.
T Consensus 152 ~~-~~~~~------~~~~~~LkpgG~lvi~~~ 176 (317)
T 1dl5_A 152 VG-VDEVP------ETWFTQLKEGGRVIVPIN 176 (317)
T ss_dssp SB-BSCCC------HHHHHHEEEEEEEEEEBC
T ss_pred CC-HHHHH------HHHHHhcCCCcEEEEEEC
Confidence 87 88875 578999999999999864
No 140
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=99.02 E-value=1.8e-10 Score=126.26 Aligned_cols=89 Identities=13% Similarity=0.119 Sum_probs=73.4
Q ss_pred CCCCeEEEEcCCCCHhHHHHHhcCCCcEEEEecCCC------------C---CcEEeccCCCC--CCCCCceeEEEEcCc
Q 010086 115 SQSAKSLCVETQYGQDVFALKEIGVEDSIGIFKKSS------------K---PLVISGEGHRI--PFDGNTFDFVFVGGA 177 (518)
Q Consensus 115 ~~~~rvLDVGcGtG~~~~~L~~~g~~~v~gID~s~~------------~---~l~~~~da~~L--Pf~D~SFD~V~s~~~ 177 (518)
..+.||||||||+|.++..|++.| .+|+|||+++. . ..+.+++++++ ++++++||+|+|..+
T Consensus 65 ~~~~~vLDvGCG~G~~~~~la~~g-a~V~giD~~~~~i~~a~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~fD~v~~~e~ 143 (569)
T 4azs_A 65 GRPLNVLDLGCAQGFFSLSLASKG-ATIVGIDFQQENINVCRALAEENPDFAAEFRVGRIEEVIAALEEGEFDLAIGLSV 143 (569)
T ss_dssp TSCCEEEEETCTTSHHHHHHHHTT-CEEEEEESCHHHHHHHHHHHHTSTTSEEEEEECCHHHHHHHCCTTSCSEEEEESC
T ss_pred CCCCeEEEECCCCcHHHHHHHhCC-CEEEEECCCHHHHHHHHHHHHhcCCCceEEEECCHHHHhhhccCCCccEEEECcc
Confidence 356799999999999999999999 79999999841 1 12457888888 688999999999998
Q ss_pred eeeccCChHH--HHHHHHhcccCCcEEEEE
Q 010086 178 RLEKASKPLD--FASEIVRTLKPEGFAVVH 205 (518)
Q Consensus 178 ~l~~~~dp~~--~l~Ei~RVLKPGG~lvi~ 205 (518)
|+|+++|.. .+..+.++|+++|..++.
T Consensus 144 -~ehv~~~~~~~~~~~~~~tl~~~~~~~~~ 172 (569)
T 4azs_A 144 -FHHIVHLHGIDEVKRLLSRLADVTQAVIL 172 (569)
T ss_dssp -HHHHHHHHCHHHHHHHHHHHHHHSSEEEE
T ss_pred -hhcCCCHHHHHHHHHHHHHhccccceeeE
Confidence 999998864 356788899999875554
No 141
>3gwz_A MMCR; methyltransferase, mitomycin, S-adenosyl methionine, transferase; HET: MSE SAH; 1.91A {Streptomyces lavendulae} PDB: 3gxo_A*
Probab=99.01 E-value=4.4e-09 Score=108.76 Aligned_cols=96 Identities=11% Similarity=0.063 Sum_probs=75.8
Q ss_pred HHHHHcCCCCCCCeEEEEcCCCCHhHHHHHhcC-CCcEEEEecCCC----------------CCcEEeccCCCCCCCCCc
Q 010086 106 QDLISEGYLSQSAKSLCVETQYGQDVFALKEIG-VEDSIGIFKKSS----------------KPLVISGEGHRIPFDGNT 168 (518)
Q Consensus 106 ~~L~~~gll~~~~rvLDVGcGtG~~~~~L~~~g-~~~v~gID~s~~----------------~~l~~~~da~~LPf~D~S 168 (518)
..+.+.--++++.+|||||||+|..+..+.+.. ..+++++|+ +. ...++.+|.. .|+|+ .
T Consensus 192 ~~l~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~l~~~v~~~~~d~~-~~~p~-~ 268 (369)
T 3gwz_A 192 GQVAAAYDFSGAATAVDIGGGRGSLMAAVLDAFPGLRGTLLER-PPVAEEARELLTGRGLADRCEILPGDFF-ETIPD-G 268 (369)
T ss_dssp HHHHHHSCCTTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHHHHHHHHHHTTCTTTEEEEECCTT-TCCCS-S
T ss_pred HHHHHhCCCccCcEEEEeCCCccHHHHHHHHHCCCCeEEEEcC-HHHHHHHHHhhhhcCcCCceEEeccCCC-CCCCC-C
Confidence 344444345677899999999999998887652 358999997 31 1234577877 67877 8
Q ss_pred eeEEEEcCceeeccCChH--HHHHHHHhcccCCcEEEEE
Q 010086 169 FDFVFVGGARLEKASKPL--DFASEIVRTLKPEGFAVVH 205 (518)
Q Consensus 169 FD~V~s~~~~l~~~~dp~--~~l~Ei~RVLKPGG~lvi~ 205 (518)
||+|++..+ +|+++++. ++++++.|+|||||++++.
T Consensus 269 ~D~v~~~~v-lh~~~d~~~~~~L~~~~~~L~pgG~l~i~ 306 (369)
T 3gwz_A 269 ADVYLIKHV-LHDWDDDDVVRILRRIATAMKPDSRLLVI 306 (369)
T ss_dssp CSEEEEESC-GGGSCHHHHHHHHHHHHTTCCTTCEEEEE
T ss_pred ceEEEhhhh-hccCCHHHHHHHHHHHHHHcCCCCEEEEE
Confidence 999999998 99998876 7999999999999998885
No 142
>1i9g_A Hypothetical protein RV2118C; mtase, adoMet, crystal, structural genomics, protein structure initiative; HET: SAM; 1.98A {Mycobacterium tuberculosis} SCOP: c.66.1.13
Probab=99.01 E-value=8.3e-10 Score=108.64 Aligned_cols=100 Identities=15% Similarity=0.181 Sum_probs=78.3
Q ss_pred HHHHHHHHHcCCCCCCCeEEEEcCCCCHhHHHHHhc-C-CCcEEEEecCCC------------------CCcEEeccCCC
Q 010086 102 SSVFQDLISEGYLSQSAKSLCVETQYGQDVFALKEI-G-VEDSIGIFKKSS------------------KPLVISGEGHR 161 (518)
Q Consensus 102 ~~l~~~L~~~gll~~~~rvLDVGcGtG~~~~~L~~~-g-~~~v~gID~s~~------------------~~l~~~~da~~ 161 (518)
+.....++....++++.+|||+|||+|..+..+++. + ..+++++|+++. ...++.+|+.+
T Consensus 85 ~~~~~~i~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~g~~~~~v~~~~~d~~~ 164 (280)
T 1i9g_A 85 PKDAAQIVHEGDIFPGARVLEAGAGSGALTLSLLRAVGPAGQVISYEQRADHAEHARRNVSGCYGQPPDNWRLVVSDLAD 164 (280)
T ss_dssp HHHHHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHHTSCCTTEEEECSCGGG
T ss_pred HHHHHHHHHHcCCCCCCEEEEEcccccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhcCCCCCcEEEEECchHh
Confidence 333444444445788999999999999999888773 3 469999998731 11346789988
Q ss_pred CCCCCCceeEEEEcCceeeccCChHHHHHHHHhcccCCcEEEEEec
Q 010086 162 IPFDGNTFDFVFVGGARLEKASKPLDFASEIVRTLKPEGFAVVHVR 207 (518)
Q Consensus 162 LPf~D~SFD~V~s~~~~l~~~~dp~~~l~Ei~RVLKPGG~lvi~~~ 207 (518)
+++++++||+|++. .++|..+++++.|+|||||++++.+.
T Consensus 165 ~~~~~~~~D~v~~~------~~~~~~~l~~~~~~L~pgG~l~~~~~ 204 (280)
T 1i9g_A 165 SELPDGSVDRAVLD------MLAPWEVLDAVSRLLVAGGVLMVYVA 204 (280)
T ss_dssp CCCCTTCEEEEEEE------SSCGGGGHHHHHHHEEEEEEEEEEES
T ss_pred cCCCCCceeEEEEC------CcCHHHHHHHHHHhCCCCCEEEEEeC
Confidence 89999999999983 34688999999999999999998764
No 143
>1yb2_A Hypothetical protein TA0852; structural genomics, methyltransferase, thermoplasma acidoph midwest center for structural genomics, MCSG; 2.01A {Thermoplasma acidophilum} SCOP: c.66.1.13
Probab=99.01 E-value=5.7e-10 Score=110.53 Aligned_cols=93 Identities=13% Similarity=0.074 Sum_probs=72.3
Q ss_pred HHHcCCCCCCCeEEEEcCCCCHhHHHHHhc-C-CCcEEEEecCCC-----------C-----CcEEeccCCCCCCCCCce
Q 010086 108 LISEGYLSQSAKSLCVETQYGQDVFALKEI-G-VEDSIGIFKKSS-----------K-----PLVISGEGHRIPFDGNTF 169 (518)
Q Consensus 108 L~~~gll~~~~rvLDVGcGtG~~~~~L~~~-g-~~~v~gID~s~~-----------~-----~l~~~~da~~LPf~D~SF 169 (518)
+.+...++++.+|||+|||+|..+..+++. + ..+++|+|+++. . ..++.+|+.+ ++++++|
T Consensus 102 ~~~~~~~~~~~~VLD~G~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~g~~~v~~~~~d~~~-~~~~~~f 180 (275)
T 1yb2_A 102 IIMRCGLRPGMDILEVGVGSGNMSSYILYALNGKGTLTVVERDEDNLKKAMDNLSEFYDIGNVRTSRSDIAD-FISDQMY 180 (275)
T ss_dssp ----CCCCTTCEEEEECCTTSHHHHHHHHHHTTSSEEEEECSCHHHHHHHHHHHHTTSCCTTEEEECSCTTT-CCCSCCE
T ss_pred HHHHcCCCCcCEEEEecCCCCHHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhcCCCCcEEEEECchhc-cCcCCCc
Confidence 344445678899999999999999888775 2 379999999731 1 2245778877 7888999
Q ss_pred eEEEEcCceeeccCChHHHHHHHHhcccCCcEEEEEec
Q 010086 170 DFVFVGGARLEKASKPLDFASEIVRTLKPEGFAVVHVR 207 (518)
Q Consensus 170 D~V~s~~~~l~~~~dp~~~l~Ei~RVLKPGG~lvi~~~ 207 (518)
|+|++ |++++..+++++.|+|||||++++...
T Consensus 181 D~Vi~------~~~~~~~~l~~~~~~LkpgG~l~i~~~ 212 (275)
T 1yb2_A 181 DAVIA------DIPDPWNHVQKIASMMKPGSVATFYLP 212 (275)
T ss_dssp EEEEE------CCSCGGGSHHHHHHTEEEEEEEEEEES
T ss_pred cEEEE------cCcCHHHHHHHHHHHcCCCCEEEEEeC
Confidence 99998 345788999999999999999998764
No 144
>2fpo_A Methylase YHHF; structural genomics, putative methyltransferase, PSI, protei structure initiative; HET: MSE; 2.05A {Escherichia coli} SCOP: c.66.1.46
Probab=99.00 E-value=4.2e-10 Score=106.58 Aligned_cols=91 Identities=13% Similarity=0.062 Sum_probs=71.7
Q ss_pred CCCeEEEEcCCCCHhHHHHHhcCCCcEEEEecCCC---------------CCcEEeccCCC-CCCCCCceeEEEEcCcee
Q 010086 116 QSAKSLCVETQYGQDVFALKEIGVEDSIGIFKKSS---------------KPLVISGEGHR-IPFDGNTFDFVFVGGARL 179 (518)
Q Consensus 116 ~~~rvLDVGcGtG~~~~~L~~~g~~~v~gID~s~~---------------~~l~~~~da~~-LPf~D~SFD~V~s~~~~l 179 (518)
++.+|||+|||+|..+..+...|..+|+|+|+++. ...++++|+.+ +|+++++||+|++... +
T Consensus 54 ~~~~vLDlgcG~G~~~~~l~~~~~~~V~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~D~~~~~~~~~~~fD~V~~~~p-~ 132 (202)
T 2fpo_A 54 VDAQCLDCFAGSGALGLEALSRYAAGATLIEMDRAVSQQLIKNLATLKAGNARVVNSNAMSFLAQKGTPHNIVFVDPP-F 132 (202)
T ss_dssp TTCEEEETTCTTCHHHHHHHHTTCSEEEEECSCHHHHHHHHHHHHHTTCCSEEEECSCHHHHHSSCCCCEEEEEECCS-S
T ss_pred CCCeEEEeCCCcCHHHHHHHhcCCCEEEEEECCHHHHHHHHHHHHHcCCCcEEEEECCHHHHHhhcCCCCCEEEECCC-C
Confidence 57899999999999998766667679999999841 12356788776 6788899999999764 4
Q ss_pred eccCChHHHHHHHHh--cccCCcEEEEEecC
Q 010086 180 EKASKPLDFASEIVR--TLKPEGFAVVHVRA 208 (518)
Q Consensus 180 ~~~~dp~~~l~Ei~R--VLKPGG~lvi~~~~ 208 (518)
+ ..+...+++++.+ +|||||++++....
T Consensus 133 ~-~~~~~~~l~~l~~~~~L~pgG~l~i~~~~ 162 (202)
T 2fpo_A 133 R-RGLLEETINLLEDNGWLADEALIYVESEV 162 (202)
T ss_dssp S-TTTHHHHHHHHHHTTCEEEEEEEEEEEEG
T ss_pred C-CCcHHHHHHHHHhcCccCCCcEEEEEECC
Confidence 4 4567788888865 69999999987654
No 145
>3g89_A Ribosomal RNA small subunit methyltransferase G; 16S rRNA methyltransferase, translation, cytoplasm, rRNA processing; HET: HIC SAM AMP; 1.50A {Thermus thermophilus} PDB: 3g88_A* 3g8a_A* 3g8b_A*
Probab=99.00 E-value=9.7e-10 Score=108.12 Aligned_cols=89 Identities=11% Similarity=0.056 Sum_probs=71.0
Q ss_pred CCCCeEEEEcCCCCHhHHHHHhc-CCCcEEEEecCCC---------------CCcEEeccCCCCCCC---CCceeEEEEc
Q 010086 115 SQSAKSLCVETQYGQDVFALKEI-GVEDSIGIFKKSS---------------KPLVISGEGHRIPFD---GNTFDFVFVG 175 (518)
Q Consensus 115 ~~~~rvLDVGcGtG~~~~~L~~~-g~~~v~gID~s~~---------------~~l~~~~da~~LPf~---D~SFD~V~s~ 175 (518)
.++.+|||||||+|..+..++.. +..+|+|+|+++. ...++.++++++++. +++||+|+|.
T Consensus 79 ~~~~~vLDiG~G~G~~~i~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~l~~v~~~~~d~~~~~~~~~~~~~fD~I~s~ 158 (249)
T 3g89_A 79 QGPLRVLDLGTGAGFPGLPLKIVRPELELVLVDATRKKVAFVERAIEVLGLKGARALWGRAEVLAREAGHREAYARAVAR 158 (249)
T ss_dssp CSSCEEEEETCTTTTTHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHTCSSEEEEECCHHHHTTSTTTTTCEEEEEEE
T ss_pred CCCCEEEEEcCCCCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhCCCceEEEECcHHHhhcccccCCCceEEEEC
Confidence 56789999999999998887764 3469999999741 123568898888764 5899999997
Q ss_pred CceeeccCChHHHHHHHHhcccCCcEEEEEecC
Q 010086 176 GARLEKASKPLDFASEIVRTLKPEGFAVVHVRA 208 (518)
Q Consensus 176 ~~~l~~~~dp~~~l~Ei~RVLKPGG~lvi~~~~ 208 (518)
.. .+...+++++.|+|||||++++..+.
T Consensus 159 a~-----~~~~~ll~~~~~~LkpgG~l~~~~g~ 186 (249)
T 3g89_A 159 AV-----APLCVLSELLLPFLEVGGAAVAMKGP 186 (249)
T ss_dssp SS-----CCHHHHHHHHGGGEEEEEEEEEEECS
T ss_pred Cc-----CCHHHHHHHHHHHcCCCeEEEEEeCC
Confidence 53 34678899999999999999887653
No 146
>1g8a_A Fibrillarin-like PRE-rRNA processing protein; rRNA binding, RNA binding, structural genomics, BSGC structure funded by NIH; 1.40A {Pyrococcus horikoshii} SCOP: c.66.1.3 PDB: 2nnw_B 3nmu_F* 3nvk_I* 3nvm_B 1pry_A
Probab=99.00 E-value=4.2e-09 Score=100.49 Aligned_cols=119 Identities=13% Similarity=0.156 Sum_probs=79.7
Q ss_pred CCCCCeEEEEcCCCCHhHHHHHhc-C-CCcEEEEecCCC-------------CCcEEeccCCCCC---CCCCceeEEEEc
Q 010086 114 LSQSAKSLCVETQYGQDVFALKEI-G-VEDSIGIFKKSS-------------KPLVISGEGHRIP---FDGNTFDFVFVG 175 (518)
Q Consensus 114 l~~~~rvLDVGcGtG~~~~~L~~~-g-~~~v~gID~s~~-------------~~l~~~~da~~LP---f~D~SFD~V~s~ 175 (518)
++++.+|||+|||+|..+..+++. | ..+|+|+|+++. ...++.+|+.+.+ ..+++||+|++.
T Consensus 71 ~~~~~~vLDlG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~D~v~~~ 150 (227)
T 1g8a_A 71 IKPGKSVLYLGIASGTTASHVSDIVGWEGKIFGIEFSPRVLRELVPIVEERRNIVPILGDATKPEEYRALVPKVDVIFED 150 (227)
T ss_dssp CCTTCEEEEETTTSTTHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHSSCTTEEEEECCTTCGGGGTTTCCCEEEEEEC
T ss_pred CCCCCEEEEEeccCCHHHHHHHHHhCCCeEEEEEECCHHHHHHHHHHHhccCCCEEEEccCCCcchhhcccCCceEEEEC
Confidence 578899999999999999888764 4 369999999851 1234677877631 224689999986
Q ss_pred CceeeccCCh-HHHHHHHHhcccCCcEEEEEecCCCcc--------CchhHhhhccCccEEEEeccCCCC
Q 010086 176 GARLEKASKP-LDFASEIVRTLKPEGFAVVHVRAKDEY--------SFNSFLDLFNSCKLVKSRDIDGID 236 (518)
Q Consensus 176 ~~~l~~~~dp-~~~l~Ei~RVLKPGG~lvi~~~~~~~~--------s~~~~~~lf~~~~~v~~~~v~~~~ 236 (518)
.. + ++. ..++.++.|+|||||++++.+...... +...+..+-..|+++.......|.
T Consensus 151 ~~---~-~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~l~~l~~~f~~~~~~~~~~~~ 216 (227)
T 1g8a_A 151 VA---Q-PTQAKILIDNAEVYLKRGGYGMIAVKSRSIDVTKEPEQVFREVERELSEYFEVIERLNLEPYE 216 (227)
T ss_dssp CC---S-TTHHHHHHHHHHHHEEEEEEEEEEEEGGGTCTTSCHHHHHHHHHHHHHTTSEEEEEEECTTTS
T ss_pred CC---C-HhHHHHHHHHHHHhcCCCCEEEEEEecCCCCCCCChhhhhHHHHHHHHhhceeeeEeccCccc
Confidence 42 2 233 345999999999999998875332210 112233332237788777766553
No 147
>2pjd_A Ribosomal RNA small subunit methyltransferase C; gene duplication, RNA modification, SAM binding; 2.10A {Escherichia coli}
Probab=99.00 E-value=5.7e-10 Score=114.41 Aligned_cols=111 Identities=14% Similarity=0.058 Sum_probs=80.3
Q ss_pred CCCCCeEEEEcCCCCHhHHHHHhcCC-CcEEEEecCCC--------------CCcEEeccCCCCCCCCCceeEEEEcCce
Q 010086 114 LSQSAKSLCVETQYGQDVFALKEIGV-EDSIGIFKKSS--------------KPLVISGEGHRIPFDGNTFDFVFVGGAR 178 (518)
Q Consensus 114 l~~~~rvLDVGcGtG~~~~~L~~~g~-~~v~gID~s~~--------------~~l~~~~da~~LPf~D~SFD~V~s~~~~ 178 (518)
..++.+|||+|||+|..+..+.+.+. .+++|+|+++. ...++.+|..+ +.+++||+|++...
T Consensus 194 ~~~~~~VLDlGcG~G~~~~~la~~~~~~~v~~vD~s~~~l~~a~~~~~~~~~~~~~~~~d~~~--~~~~~fD~Iv~~~~- 270 (343)
T 2pjd_A 194 PHTKGKVLDVGCGAGVLSVAFARHSPKIRLTLCDVSAPAVEASRATLAANGVEGEVFASNVFS--EVKGRFDMIISNPP- 270 (343)
T ss_dssp TTCCSBCCBTTCTTSHHHHHHHHHCTTCBCEEEESBHHHHHHHHHHHHHTTCCCEEEECSTTT--TCCSCEEEEEECCC-
T ss_pred cCCCCeEEEecCccCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhCCCCEEEEccccc--cccCCeeEEEECCC-
Confidence 34577999999999999988887653 48999999741 12245666654 45889999999886
Q ss_pred eec-----cCChHHHHHHHHhcccCCcEEEEEecCCCccCchhHhhhccCccEEE
Q 010086 179 LEK-----ASKPLDFASEIVRTLKPEGFAVVHVRAKDEYSFNSFLDLFNSCKLVK 228 (518)
Q Consensus 179 l~~-----~~dp~~~l~Ei~RVLKPGG~lvi~~~~~~~~s~~~~~~lf~~~~~v~ 228 (518)
||+ ..++.++++++.|+|||||.+++.......+. ..+..+|.+++.+.
T Consensus 271 ~~~g~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~-~~l~~~f~~~~~~~ 324 (343)
T 2pjd_A 271 FHDGMQTSLDAAQTLIRGAVRHLNSGGELRIVANAFLPYP-DVLDETFGFHEVIA 324 (343)
T ss_dssp CCSSSHHHHHHHHHHHHHHGGGEEEEEEEEEEEETTSSHH-HHHHHHHSCCEEEE
T ss_pred cccCccCCHHHHHHHHHHHHHhCCCCcEEEEEEcCCCCcH-HHHHHhcCceEEEe
Confidence 764 33467899999999999999998765433321 23444577665543
No 148
>3gdh_A Trimethylguanosine synthase homolog; M7G, CAP, dimethyltransferase, usnRNA, snoRNA, telomerase, cytoplasm, methyltransferase, nucleus; HET: MGP SAH; 2.00A {Homo sapiens} PDB: 3egi_A*
Probab=98.99 E-value=2.5e-11 Score=116.91 Aligned_cols=87 Identities=16% Similarity=0.145 Sum_probs=73.7
Q ss_pred CCCeEEEEcCCCCHhHHHHHhcCCCcEEEEecCCC----------------CCcEEeccCCCCCCCCCceeEEEEcCcee
Q 010086 116 QSAKSLCVETQYGQDVFALKEIGVEDSIGIFKKSS----------------KPLVISGEGHRIPFDGNTFDFVFVGGARL 179 (518)
Q Consensus 116 ~~~rvLDVGcGtG~~~~~L~~~g~~~v~gID~s~~----------------~~l~~~~da~~LPf~D~SFD~V~s~~~~l 179 (518)
++.+|||+|||+|..+..+++.| .+|+|+|+++. ...++.+|+.+++ ++++||+|++... +
T Consensus 78 ~~~~vLD~gcG~G~~~~~la~~~-~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~-~~~~~D~v~~~~~-~ 154 (241)
T 3gdh_A 78 KCDVVVDAFCGVGGNTIQFALTG-MRVIAIDIDPVKIALARNNAEVYGIADKIEFICGDFLLLA-SFLKADVVFLSPP-W 154 (241)
T ss_dssp CCSEEEETTCTTSHHHHHHHHTT-CEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHG-GGCCCSEEEECCC-C
T ss_pred CCCEEEECccccCHHHHHHHHcC-CEEEEEECCHHHHHHHHHHHHHcCCCcCeEEEECChHHhc-ccCCCCEEEECCC-c
Confidence 78899999999999999998887 89999999841 1235678888877 7889999999887 8
Q ss_pred eccCChHHHHHHHHhcccCCcEEEEE
Q 010086 180 EKASKPLDFASEIVRTLKPEGFAVVH 205 (518)
Q Consensus 180 ~~~~dp~~~l~Ei~RVLKPGG~lvi~ 205 (518)
++..++...+.++.|+|||||++++.
T Consensus 155 ~~~~~~~~~~~~~~~~L~pgG~~i~~ 180 (241)
T 3gdh_A 155 GGPDYATAETFDIRTMMSPDGFEIFR 180 (241)
T ss_dssp SSGGGGGSSSBCTTTSCSSCHHHHHH
T ss_pred CCcchhhhHHHHHHhhcCCcceeHHH
Confidence 88877777888999999999996654
No 149
>1fp1_D Isoliquiritigenin 2'-O-methyltransferase; protein-substrate, protein-product complex; HET: SAH HCC; 1.82A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpq_A*
Probab=98.99 E-value=1.2e-09 Score=112.98 Aligned_cols=96 Identities=11% Similarity=0.066 Sum_probs=75.3
Q ss_pred HHHHHcC-CCCCCCeEEEEcCCCCHhHHHHHhcC-CCcEEEEecCC-------C-CCcEEeccCCCCCCCCCceeEEEEc
Q 010086 106 QDLISEG-YLSQSAKSLCVETQYGQDVFALKEIG-VEDSIGIFKKS-------S-KPLVISGEGHRIPFDGNTFDFVFVG 175 (518)
Q Consensus 106 ~~L~~~g-ll~~~~rvLDVGcGtG~~~~~L~~~g-~~~v~gID~s~-------~-~~l~~~~da~~LPf~D~SFD~V~s~ 175 (518)
..+.+.- .++++.+|||||||+|..+..+.+.+ ...++++|+.. . ...++.+|..+ |+++ ||+|++.
T Consensus 198 ~~l~~~~~~~~~~~~vLDvG~G~G~~~~~l~~~~~~~~~~~~D~~~~~~~a~~~~~v~~~~~d~~~-~~~~--~D~v~~~ 274 (372)
T 1fp1_D 198 KRMLEIYTGFEGISTLVDVGGGSGRNLELIISKYPLIKGINFDLPQVIENAPPLSGIEHVGGDMFA-SVPQ--GDAMILK 274 (372)
T ss_dssp HHHHHHCCTTTTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEECHHHHTTCCCCTTEEEEECCTTT-CCCC--EEEEEEE
T ss_pred HHHHHHhhccCCCCEEEEeCCCCcHHHHHHHHHCCCCeEEEeChHHHHHhhhhcCCCEEEeCCccc-CCCC--CCEEEEe
Confidence 3444432 25677899999999999998887754 35788889721 0 12346788877 8876 9999999
Q ss_pred CceeeccCChH--HHHHHHHhcccCCcEEEEE
Q 010086 176 GARLEKASKPL--DFASEIVRTLKPEGFAVVH 205 (518)
Q Consensus 176 ~~~l~~~~dp~--~~l~Ei~RVLKPGG~lvi~ 205 (518)
.+ |||++++. ++++++.|+|||||++++.
T Consensus 275 ~~-lh~~~d~~~~~~l~~~~~~L~pgG~l~i~ 305 (372)
T 1fp1_D 275 AV-CHNWSDEKCIEFLSNCHKALSPNGKVIIV 305 (372)
T ss_dssp SS-GGGSCHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred cc-cccCCHHHHHHHHHHHHHhcCCCCEEEEE
Confidence 98 99999887 8999999999999998886
No 150
>4dcm_A Ribosomal RNA large subunit methyltransferase G; 23S rRNA (guanine1835-N2)-methyltransferase; HET: SAM; 2.30A {Escherichia coli}
Probab=98.99 E-value=1.6e-09 Score=113.03 Aligned_cols=113 Identities=10% Similarity=0.115 Sum_probs=81.5
Q ss_pred CCCCCeEEEEcCCCCHhHHHHHhcC-CCcEEEEecCCC------------C------CcEEeccCCCCCCCCCceeEEEE
Q 010086 114 LSQSAKSLCVETQYGQDVFALKEIG-VEDSIGIFKKSS------------K------PLVISGEGHRIPFDGNTFDFVFV 174 (518)
Q Consensus 114 l~~~~rvLDVGcGtG~~~~~L~~~g-~~~v~gID~s~~------------~------~l~~~~da~~LPf~D~SFD~V~s 174 (518)
..++.+|||+|||+|..+..+++.+ ..+|+|+|+++. . ..+..+|..+ ++++++||+|++
T Consensus 220 ~~~~~~VLDlGcG~G~~s~~la~~~p~~~V~gvD~s~~al~~Ar~n~~~ngl~~~~~v~~~~~D~~~-~~~~~~fD~Ii~ 298 (375)
T 4dcm_A 220 ENLEGEIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNALS-GVEPFRFNAVLC 298 (375)
T ss_dssp CSCCSEEEEETCTTCHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHCGGGGGGEEEEECSTTT-TCCTTCEEEEEE
T ss_pred ccCCCeEEEEeCcchHHHHHHHHHCCCCEEEEEECcHHHHHHHHHHHHHcCCCcCceEEEEechhhc-cCCCCCeeEEEE
Confidence 3456899999999999998888764 479999999741 0 1235777776 788999999999
Q ss_pred cCceeeccC---C--hHHHHHHHHhcccCCcEEEEEecCCCccCchhHhhhccCccEEEE
Q 010086 175 GGARLEKAS---K--PLDFASEIVRTLKPEGFAVVHVRAKDEYSFNSFLDLFNSCKLVKS 229 (518)
Q Consensus 175 ~~~~l~~~~---d--p~~~l~Ei~RVLKPGG~lvi~~~~~~~~s~~~~~~lf~~~~~v~~ 229 (518)
... ||+.. + ..++++++.|+|||||++++.......|. ..+.++|.+++++..
T Consensus 299 npp-fh~~~~~~~~~~~~~l~~~~~~LkpgG~l~iv~n~~~~~~-~~l~~~fg~~~~~a~ 356 (375)
T 4dcm_A 299 NPP-FHQQHALTDNVAWEMFHHARRCLKINGELYIVANRHLDYF-HKLKKIFGNCTTIAT 356 (375)
T ss_dssp CCC-C-------CCHHHHHHHHHHHHEEEEEEEEEEEETTSCHH-HHHHHHHSCCEEEEE
T ss_pred CCC-cccCcccCHHHHHHHHHHHHHhCCCCcEEEEEEECCcCHH-HHHHHhcCCEEEEee
Confidence 876 76532 2 13679999999999999999765444332 345566777766554
No 151
>1af7_A Chemotaxis receptor methyltransferase CHER; chemotaxis receptor methylation; HET: SAH; 2.00A {Salmonella typhimurium} SCOP: a.58.1.1 c.66.1.8 PDB: 1bc5_A*
Probab=98.99 E-value=7.2e-10 Score=111.14 Aligned_cols=90 Identities=16% Similarity=0.183 Sum_probs=68.5
Q ss_pred CCCeEEEEcCCCCHh----HHHHHhc-C----CCcEEEEecCCC----------C-------------------------
Q 010086 116 QSAKSLCVETQYGQD----VFALKEI-G----VEDSIGIFKKSS----------K------------------------- 151 (518)
Q Consensus 116 ~~~rvLDVGcGtG~~----~~~L~~~-g----~~~v~gID~s~~----------~------------------------- 151 (518)
++.+|||+|||||.. +..|++. + ..+|+|+|+|+. +
T Consensus 105 ~~~rIld~GCgTGee~ysiAi~L~e~~~~~~~~~~I~atDis~~~L~~Ar~~~y~~~~~~~~~~~~~~~~f~~~~~~~~~ 184 (274)
T 1af7_A 105 GEYRVWSAAASTGEEPYSIAITLADALGMAPGRWKVFASDIDTEVLEKARSGIYRLSELKTLSPQQLQRYFMRGTGPHEG 184 (274)
T ss_dssp SCEEEEESCCTTTHHHHHHHHHHHHHHCSCTTSEEEEEEESCHHHHHHHHHTEEEGGGGTTSCHHHHHHHEEECCTTSCS
T ss_pred CCcEEEEeeccCChhHHHHHHHHHHhcccCCCCeEEEEEECCHHHHHHHHhcCCchhhhhcCCHHHHHHHhhccccCCCC
Confidence 457999999999984 4445543 3 148999999731 0
Q ss_pred -----------CcEEeccCCCCCCC-CCceeEEEEcCceeeccCCh--HHHHHHHHhcccCCcEEEEEe
Q 010086 152 -----------PLVISGEGHRIPFD-GNTFDFVFVGGARLEKASKP--LDFASEIVRTLKPEGFAVVHV 206 (518)
Q Consensus 152 -----------~l~~~~da~~LPf~-D~SFD~V~s~~~~l~~~~dp--~~~l~Ei~RVLKPGG~lvi~~ 206 (518)
..+.++|..+.||+ ++.||+|+|.++ ++|++++ .+++++++++|||||++++..
T Consensus 185 ~~~v~~~lr~~V~F~~~dl~~~~~~~~~~fDlI~crnv-liyf~~~~~~~vl~~~~~~L~pgG~L~lg~ 252 (274)
T 1af7_A 185 LVRVRQELANYVEFSSVNLLEKQYNVPGPFDAIFCRNV-MIYFDKTTQEDILRRFVPLLKPDGLLFAGH 252 (274)
T ss_dssp EEEECHHHHTTEEEEECCTTCSSCCCCCCEEEEEECSS-GGGSCHHHHHHHHHHHGGGEEEEEEEEECT
T ss_pred ceeechhhcccCeEEecccCCCCCCcCCCeeEEEECCc-hHhCCHHHHHHHHHHHHHHhCCCcEEEEEe
Confidence 11235677777786 789999999998 9998766 589999999999999998843
No 152
>2r3s_A Uncharacterized protein; methyltransferase domain, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 2.15A {Nostoc punctiforme}
Probab=98.99 E-value=8.8e-10 Score=111.27 Aligned_cols=90 Identities=18% Similarity=0.220 Sum_probs=73.3
Q ss_pred CCCCeEEEEcCCCCHhHHHHHhc-CCCcEEEEecCCC---------------CCcEEeccCCCCCCCCCceeEEEEcCce
Q 010086 115 SQSAKSLCVETQYGQDVFALKEI-GVEDSIGIFKKSS---------------KPLVISGEGHRIPFDGNTFDFVFVGGAR 178 (518)
Q Consensus 115 ~~~~rvLDVGcGtG~~~~~L~~~-g~~~v~gID~s~~---------------~~l~~~~da~~LPf~D~SFD~V~s~~~~ 178 (518)
+++.+|||||||+|..+..+.+. +..+++++|++.. ...++.+|..+.|++++ ||+|++.++
T Consensus 164 ~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~-~D~v~~~~~- 241 (335)
T 2r3s_A 164 IEPLKVLDISASHGLFGIAVAQHNPNAEIFGVDWASVLEVAKENARIQGVASRYHTIAGSAFEVDYGND-YDLVLLPNF- 241 (335)
T ss_dssp CCCSEEEEETCTTCHHHHHHHHHCTTCEEEEEECHHHHHHHHHHHHHHTCGGGEEEEESCTTTSCCCSC-EEEEEEESC-
T ss_pred CCCCEEEEECCCcCHHHHHHHHHCCCCeEEEEecHHHHHHHHHHHHhcCCCcceEEEecccccCCCCCC-CcEEEEcch-
Confidence 67789999999999999888764 2358999998610 12346788888888876 999999997
Q ss_pred eeccCCh--HHHHHHHHhcccCCcEEEEEe
Q 010086 179 LEKASKP--LDFASEIVRTLKPEGFAVVHV 206 (518)
Q Consensus 179 l~~~~dp--~~~l~Ei~RVLKPGG~lvi~~ 206 (518)
+||++++ .++++++.|+|||||.+++..
T Consensus 242 l~~~~~~~~~~~l~~~~~~L~pgG~l~i~e 271 (335)
T 2r3s_A 242 LHHFDVATCEQLLRKIKTALAVEGKVIVFD 271 (335)
T ss_dssp GGGSCHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred hccCCHHHHHHHHHHHHHhCCCCcEEEEEe
Confidence 9998665 589999999999999887763
No 153
>2nxc_A L11 mtase, ribosomal protein L11 methyltransferase; transferase S-adenosly-L-methionine dependent methyltransfer posttranslational modification; 1.59A {Thermus thermophilus} SCOP: c.66.1.39 PDB: 1ufk_A 2nxe_A* 2nxj_A 2nxn_A 2zbp_A* 2zbq_A* 2zbr_A* 3cjq_A* 3cjr_A* 3cju_A* 3egv_A* 3cjt_A*
Probab=98.98 E-value=9.5e-10 Score=108.14 Aligned_cols=112 Identities=18% Similarity=0.184 Sum_probs=80.1
Q ss_pred CCCCCeEEEEcCCCCHhHHHHHhcCCCcEEEEecCCC--------------CCcEEeccCCCCCCCCCceeEEEEcCcee
Q 010086 114 LSQSAKSLCVETQYGQDVFALKEIGVEDSIGIFKKSS--------------KPLVISGEGHRIPFDGNTFDFVFVGGARL 179 (518)
Q Consensus 114 l~~~~rvLDVGcGtG~~~~~L~~~g~~~v~gID~s~~--------------~~l~~~~da~~LPf~D~SFD~V~s~~~~l 179 (518)
++++.+|||+|||+|..+..+++.|. +|+|+|+++. ...+..+|..+ ++++++||+|+++.. .
T Consensus 118 ~~~~~~VLDiGcG~G~l~~~la~~g~-~v~gvDi~~~~v~~a~~n~~~~~~~v~~~~~d~~~-~~~~~~fD~Vv~n~~-~ 194 (254)
T 2nxc_A 118 LRPGDKVLDLGTGSGVLAIAAEKLGG-KALGVDIDPMVLPQAEANAKRNGVRPRFLEGSLEA-ALPFGPFDLLVANLY-A 194 (254)
T ss_dssp CCTTCEEEEETCTTSHHHHHHHHTTC-EEEEEESCGGGHHHHHHHHHHTTCCCEEEESCHHH-HGGGCCEEEEEEECC-H
T ss_pred cCCCCEEEEecCCCcHHHHHHHHhCC-eEEEEECCHHHHHHHHHHHHHcCCcEEEEECChhh-cCcCCCCCEEEECCc-H
Confidence 57889999999999999988888885 9999999752 12344566554 356789999999763 4
Q ss_pred eccCChHHHHHHHHhcccCCcEEEEEecCCCccCchhHhhhcc--CccEEEEeccC
Q 010086 180 EKASKPLDFASEIVRTLKPEGFAVVHVRAKDEYSFNSFLDLFN--SCKLVKSRDID 233 (518)
Q Consensus 180 ~~~~dp~~~l~Ei~RVLKPGG~lvi~~~~~~~~s~~~~~~lf~--~~~~v~~~~v~ 233 (518)
++ ...++.++.|+|||||++++...... ....+..++. .|+++.....+
T Consensus 195 ~~---~~~~l~~~~~~LkpgG~lils~~~~~--~~~~v~~~l~~~Gf~~~~~~~~~ 245 (254)
T 2nxc_A 195 EL---HAALAPRYREALVPGGRALLTGILKD--RAPLVREAMAGAGFRPLEEAAEG 245 (254)
T ss_dssp HH---HHHHHHHHHHHEEEEEEEEEEEEEGG--GHHHHHHHHHHTTCEEEEEEEET
T ss_pred HH---HHHHHHHHHHHcCCCCEEEEEeeccC--CHHHHHHHHHHCCCEEEEEeccC
Confidence 43 45789999999999999988632111 1234444433 47777776654
No 154
>2ip2_A Probable phenazine-specific methyltransferase; pyocyanin, phenazine-1-carboxy PHZM; 1.80A {Pseudomonas aeruginosa}
Probab=98.97 E-value=3.1e-09 Score=107.56 Aligned_cols=95 Identities=8% Similarity=0.054 Sum_probs=74.1
Q ss_pred HHHHHcCCCCCCCeEEEEcCCCCHhHHHHHhc-CCCcEEEEecCCCC----------------CcEEeccCCCCCCCCCc
Q 010086 106 QDLISEGYLSQSAKSLCVETQYGQDVFALKEI-GVEDSIGIFKKSSK----------------PLVISGEGHRIPFDGNT 168 (518)
Q Consensus 106 ~~L~~~gll~~~~rvLDVGcGtG~~~~~L~~~-g~~~v~gID~s~~~----------------~l~~~~da~~LPf~D~S 168 (518)
..+.+..-+++ .+|||||||+|..+..+.+. +..+++++|+ +.. ..++.+|..+ |++ ++
T Consensus 158 ~~~~~~~~~~~-~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~-~~~-~~ 233 (334)
T 2ip2_A 158 HEIPRLLDFRG-RSFVDVGGGSGELTKAILQAEPSARGVMLDR-EGSLGVARDNLSSLLAGERVSLVGGDMLQ-EVP-SN 233 (334)
T ss_dssp HHHHHHSCCTT-CEEEEETCTTCHHHHHHHHHCTTCEEEEEEC-TTCTHHHHHHTHHHHHTTSEEEEESCTTT-CCC-SS
T ss_pred HHHHHhCCCCC-CEEEEeCCCchHHHHHHHHHCCCCEEEEeCc-HHHHHHHHHHHhhcCCCCcEEEecCCCCC-CCC-CC
Confidence 34444333455 89999999999999888764 2358999998 521 1245677766 676 68
Q ss_pred eeEEEEcCceeeccCChH--HHHHHHHhcccCCcEEEEE
Q 010086 169 FDFVFVGGARLEKASKPL--DFASEIVRTLKPEGFAVVH 205 (518)
Q Consensus 169 FD~V~s~~~~l~~~~dp~--~~l~Ei~RVLKPGG~lvi~ 205 (518)
||+|++..+ +||++++. ++++++.|+|||||++++.
T Consensus 234 ~D~v~~~~v-l~~~~~~~~~~~l~~~~~~L~pgG~l~i~ 271 (334)
T 2ip2_A 234 GDIYLLSRI-IGDLDEAASLRLLGNCREAMAGDGRVVVI 271 (334)
T ss_dssp CSEEEEESC-GGGCCHHHHHHHHHHHHHHSCTTCEEEEE
T ss_pred CCEEEEchh-ccCCCHHHHHHHHHHHHHhcCCCCEEEEE
Confidence 999999998 99988776 8999999999999998886
No 155
>3mb5_A SAM-dependent methyltransferase; RNA methyltransferase, M1A, TRMI, intermolecular contacts, R specificity, tetramer, disulfide bond; HET: SAM; 1.60A {Pyrococcus abyssi} PDB: 3lga_A* 3lhd_C*
Probab=98.97 E-value=1.6e-09 Score=105.16 Aligned_cols=97 Identities=14% Similarity=0.137 Sum_probs=75.6
Q ss_pred HHHHHHHcCCCCCCCeEEEEcCCCCHhHHHHHhc-C-CCcEEEEecCCC--------------C--CcEEeccCCCCCCC
Q 010086 104 VFQDLISEGYLSQSAKSLCVETQYGQDVFALKEI-G-VEDSIGIFKKSS--------------K--PLVISGEGHRIPFD 165 (518)
Q Consensus 104 l~~~L~~~gll~~~~rvLDVGcGtG~~~~~L~~~-g-~~~v~gID~s~~--------------~--~l~~~~da~~LPf~ 165 (518)
....+.....++++.+|||+|||+|..+..+++. + ..+++|+|+++. + ..+..+|+.+ +++
T Consensus 81 ~~~~i~~~~~~~~~~~vldiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~-~~~ 159 (255)
T 3mb5_A 81 DAALIVAYAGISPGDFIVEAGVGSGALTLFLANIVGPEGRVVSYEIREDFAKLAWENIKWAGFDDRVTIKLKDIYE-GIE 159 (255)
T ss_dssp HHHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHTCTTTEEEECSCGGG-CCC
T ss_pred HHHHHHHhhCCCCCCEEEEecCCchHHHHHHHHHhCCCeEEEEEecCHHHHHHHHHHHHHcCCCCceEEEECchhh-ccC
Confidence 3334444455788999999999999999888775 4 479999999741 1 2345778775 488
Q ss_pred CCceeEEEEcCceeeccCChHHHHHHHHhcccCCcEEEEEec
Q 010086 166 GNTFDFVFVGGARLEKASKPLDFASEIVRTLKPEGFAVVHVR 207 (518)
Q Consensus 166 D~SFD~V~s~~~~l~~~~dp~~~l~Ei~RVLKPGG~lvi~~~ 207 (518)
+++||+|++. .+++..+++++.|+|||||++++...
T Consensus 160 ~~~~D~v~~~------~~~~~~~l~~~~~~L~~gG~l~~~~~ 195 (255)
T 3mb5_A 160 EENVDHVILD------LPQPERVVEHAAKALKPGGFFVAYTP 195 (255)
T ss_dssp CCSEEEEEEC------SSCGGGGHHHHHHHEEEEEEEEEEES
T ss_pred CCCcCEEEEC------CCCHHHHHHHHHHHcCCCCEEEEEEC
Confidence 9999999984 35678899999999999999988753
No 156
>1x19_A CRTF-related protein; methyltransferase, bacteriochllochlorophyll, BCHU, SAM, SAH, adenosylmethyonine, S-adenosylhomocysteine, ADO-Met; 2.27A {Chlorobium tepidum} PDB: 1x1a_A* 1x1b_A* 1x1c_A* 1x1d_A*
Probab=98.96 E-value=2.4e-09 Score=109.89 Aligned_cols=98 Identities=16% Similarity=0.049 Sum_probs=77.8
Q ss_pred HHHHHHcCCCCCCCeEEEEcCCCCHhHHHHHhcC-CCcEEEEecCCC--------------C--CcEEeccCCCCCCCCC
Q 010086 105 FQDLISEGYLSQSAKSLCVETQYGQDVFALKEIG-VEDSIGIFKKSS--------------K--PLVISGEGHRIPFDGN 167 (518)
Q Consensus 105 ~~~L~~~gll~~~~rvLDVGcGtG~~~~~L~~~g-~~~v~gID~s~~--------------~--~l~~~~da~~LPf~D~ 167 (518)
.+.+++.-.++++.+|||||||+|..+..+.+.. ..+++++|+ +. . ..++.+|..+.|+++.
T Consensus 179 ~~~l~~~~~~~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~ 257 (359)
T 1x19_A 179 IQLLLEEAKLDGVKKMIDVGGGIGDISAAMLKHFPELDSTILNL-PGAIDLVNENAAEKGVADRMRGIAVDIYKESYPEA 257 (359)
T ss_dssp HHHHHHHCCCTTCCEEEEESCTTCHHHHHHHHHCTTCEEEEEEC-GGGHHHHHHHHHHTTCTTTEEEEECCTTTSCCCCC
T ss_pred HHHHHHhcCCCCCCEEEEECCcccHHHHHHHHHCCCCeEEEEec-HHHHHHHHHHHHhcCCCCCEEEEeCccccCCCCCC
Confidence 3445544446778899999999999998887653 358999998 41 1 2346789888888876
Q ss_pred ceeEEEEcCceeeccCC--hHHHHHHHHhcccCCcEEEEEe
Q 010086 168 TFDFVFVGGARLEKASK--PLDFASEIVRTLKPEGFAVVHV 206 (518)
Q Consensus 168 SFD~V~s~~~~l~~~~d--p~~~l~Ei~RVLKPGG~lvi~~ 206 (518)
|+|++..+ +||+++ +.++++++.|+|||||++++..
T Consensus 258 --D~v~~~~v-lh~~~d~~~~~~l~~~~~~L~pgG~l~i~e 295 (359)
T 1x19_A 258 --DAVLFCRI-LYSANEQLSTIMCKKAFDAMRSGGRLLILD 295 (359)
T ss_dssp --SEEEEESC-GGGSCHHHHHHHHHHHHTTCCTTCEEEEEE
T ss_pred --CEEEEech-hccCCHHHHHHHHHHHHHhcCCCCEEEEEe
Confidence 99999998 999987 6789999999999999987753
No 157
>2vdv_E TRNA (guanine-N(7)-)-methyltransferase; S-adenosyl-L-methionine, phosphorylation, M7G, spout MT, tRNA processing; HET: SAM; 2.30A {Saccharomyces cerevisiae} PDB: 2vdu_E
Probab=98.96 E-value=7.9e-10 Score=107.59 Aligned_cols=89 Identities=16% Similarity=0.219 Sum_probs=70.3
Q ss_pred CCCCCCeEEEEcCCCCHhHHHHHhcC-CCcEEEEecCCC-----------------------CCcEEeccCCC-CC--CC
Q 010086 113 YLSQSAKSLCVETQYGQDVFALKEIG-VEDSIGIFKKSS-----------------------KPLVISGEGHR-IP--FD 165 (518)
Q Consensus 113 ll~~~~rvLDVGcGtG~~~~~L~~~g-~~~v~gID~s~~-----------------------~~l~~~~da~~-LP--f~ 165 (518)
.++++.+|||||||+|..+..+++.+ ..+++|||+++. ...++.+|+.+ +| |+
T Consensus 46 ~~~~~~~vLDiGcG~G~~~~~la~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~nv~~~~~D~~~~l~~~~~ 125 (246)
T 2vdv_E 46 QMTKKVTIADIGCGFGGLMIDLSPAFPEDLILGMEIRVQVTNYVEDRIIALRNNTASKHGFQNINVLRGNAMKFLPNFFE 125 (246)
T ss_dssp CBSCCEEEEEETCTTSHHHHHHHHHSTTSEEEEEESCHHHHHHHHHHHHHHHHTC-CCSTTTTEEEEECCTTSCGGGTSC
T ss_pred cCCCCCEEEEEcCCCCHHHHHHHHhCCCCCEEEEEcCHHHHHHHHHHHHHHhhccccccCCCcEEEEeccHHHHHHHhcc
Confidence 35678899999999999998888765 348999998731 11256788886 77 88
Q ss_pred CCceeEEEEcCceeeccCCh-------------HHHHHHHHhcccCCcEEEEEec
Q 010086 166 GNTFDFVFVGGARLEKASKP-------------LDFASEIVRTLKPEGFAVVHVR 207 (518)
Q Consensus 166 D~SFD~V~s~~~~l~~~~dp-------------~~~l~Ei~RVLKPGG~lvi~~~ 207 (518)
+++||.|+... ++| ..+++++.|+|||||++++.+.
T Consensus 126 ~~~~d~v~~~~------p~p~~k~~~~~~r~~~~~~l~~~~~~LkpgG~l~~~td 174 (246)
T 2vdv_E 126 KGQLSKMFFCF------PDPHFKQRKHKARIITNTLLSEYAYVLKEGGVVYTITD 174 (246)
T ss_dssp TTCEEEEEEES------CCCC------CSSCCCHHHHHHHHHHEEEEEEEEEEES
T ss_pred ccccCEEEEEC------CCcccccchhHHhhccHHHHHHHHHHcCCCCEEEEEec
Confidence 99999998643 334 3789999999999999999764
No 158
>2b25_A Hypothetical protein; structural genomics, methyl transferase, SAM, structural GEN consortium, SGC, transferase; HET: SAM; 2.50A {Homo sapiens} SCOP: c.66.1.13
Probab=98.96 E-value=1.2e-09 Score=111.36 Aligned_cols=89 Identities=18% Similarity=0.097 Sum_probs=66.7
Q ss_pred CCCCCCeEEEEcCCCCHhHHHHHhc-CC-CcEEEEecCCC--------------------------CCcEEeccCCCC--
Q 010086 113 YLSQSAKSLCVETQYGQDVFALKEI-GV-EDSIGIFKKSS--------------------------KPLVISGEGHRI-- 162 (518)
Q Consensus 113 ll~~~~rvLDVGcGtG~~~~~L~~~-g~-~~v~gID~s~~--------------------------~~l~~~~da~~L-- 162 (518)
.+.++.+|||+|||+|..+..+++. |. .+|+|+|+++. ...+..+|+.++
T Consensus 102 ~~~~g~~VLDiG~G~G~~~~~la~~~g~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~ln~~~~~~~~v~~~~~d~~~~~~ 181 (336)
T 2b25_A 102 DINPGDTVLEAGSGSGGMSLFLSKAVGSQGRVISFEVRKDHHDLAKKNYKHWRDSWKLSHVEEWPDNVDFIHKDISGATE 181 (336)
T ss_dssp TCCTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEEESSHHHHHHHHHHHHHHHHHHTTTCSSCCCCCEEEEESCTTCCC-
T ss_pred CCCCCCEEEEeCCCcCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHHhhcccccccccccCCceEEEECChHHccc
Confidence 4678999999999999999888775 54 68999999741 123457888877
Q ss_pred CCCCCceeEEEEcCceeeccCChHHHHHHHHhcccCCcEEEEEec
Q 010086 163 PFDGNTFDFVFVGGARLEKASKPLDFASEIVRTLKPEGFAVVHVR 207 (518)
Q Consensus 163 Pf~D~SFD~V~s~~~~l~~~~dp~~~l~Ei~RVLKPGG~lvi~~~ 207 (518)
++++++||+|++.. .+|..++.++.|+|||||++++...
T Consensus 182 ~~~~~~fD~V~~~~------~~~~~~l~~~~~~LkpgG~lv~~~~ 220 (336)
T 2b25_A 182 DIKSLTFDAVALDM------LNPHVTLPVFYPHLKHGGVCAVYVV 220 (336)
T ss_dssp ------EEEEEECS------SSTTTTHHHHGGGEEEEEEEEEEES
T ss_pred ccCCCCeeEEEECC------CCHHHHHHHHHHhcCCCcEEEEEeC
Confidence 67888999999854 3456689999999999999998764
No 159
>1jg1_A PIMT;, protein-L-isoaspartate O-methyltransferase; rossmann methyltransferase, protein repair isomerization; HET: SAH; 1.20A {Pyrococcus furiosus} SCOP: c.66.1.7 PDB: 1jg2_A* 1jg3_A* 1jg4_A*
Probab=98.95 E-value=1.1e-09 Score=105.71 Aligned_cols=89 Identities=24% Similarity=0.275 Sum_probs=69.4
Q ss_pred CCCCCCeEEEEcCCCCHhHHHHHhcCCCcEEEEecCCC---------------CCcEEeccCCCCCCCCCc-eeEEEEcC
Q 010086 113 YLSQSAKSLCVETQYGQDVFALKEIGVEDSIGIFKKSS---------------KPLVISGEGHRIPFDGNT-FDFVFVGG 176 (518)
Q Consensus 113 ll~~~~rvLDVGcGtG~~~~~L~~~g~~~v~gID~s~~---------------~~l~~~~da~~LPf~D~S-FD~V~s~~ 176 (518)
.++++.+|||||||+|..+..+++.+..+++|+|+++. ...+..+|. ..++++++ ||+|++..
T Consensus 88 ~~~~~~~vLdiG~G~G~~~~~la~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~-~~~~~~~~~fD~Ii~~~ 166 (235)
T 1jg1_A 88 NLKPGMNILEVGTGSGWNAALISEIVKTDVYTIERIPELVEFAKRNLERAGVKNVHVILGDG-SKGFPPKAPYDVIIVTA 166 (235)
T ss_dssp TCCTTCCEEEECCTTSHHHHHHHHHHCSCEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCG-GGCCGGGCCEEEEEECS
T ss_pred CCCCCCEEEEEeCCcCHHHHHHHHHhCCEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEECCc-ccCCCCCCCccEEEECC
Confidence 36788999999999999998887653279999998741 122456776 56777665 99999988
Q ss_pred ceeeccCChHHHHHHHHhcccCCcEEEEEecCC
Q 010086 177 ARLEKASKPLDFASEIVRTLKPEGFAVVHVRAK 209 (518)
Q Consensus 177 ~~l~~~~dp~~~l~Ei~RVLKPGG~lvi~~~~~ 209 (518)
+ ++++. .++.|+|||||++++.+...
T Consensus 167 ~-~~~~~------~~~~~~L~pgG~lvi~~~~~ 192 (235)
T 1jg1_A 167 G-APKIP------EPLIEQLKIGGKLIIPVGSY 192 (235)
T ss_dssp B-BSSCC------HHHHHTEEEEEEEEEEECSS
T ss_pred c-HHHHH------HHHHHhcCCCcEEEEEEecC
Confidence 7 88764 47899999999999988643
No 160
>1qzz_A RDMB, aclacinomycin-10-hydroxylase; anthracycline, methyltransferase, polyketide, tailoring enzymes, structural proteomics in E spine; HET: SAM; 2.10A {Streptomyces purpurascens} SCOP: a.4.5.29 c.66.1.12 PDB: 1r00_A* 1xds_A* 1xdu_A*
Probab=98.95 E-value=1.7e-09 Score=111.08 Aligned_cols=95 Identities=19% Similarity=0.068 Sum_probs=73.2
Q ss_pred HHHcCCCCCCCeEEEEcCCCCHhHHHHHhcC-CCcEEEEecCCC----------------CCcEEeccCCCCCCCCCcee
Q 010086 108 LISEGYLSQSAKSLCVETQYGQDVFALKEIG-VEDSIGIFKKSS----------------KPLVISGEGHRIPFDGNTFD 170 (518)
Q Consensus 108 L~~~gll~~~~rvLDVGcGtG~~~~~L~~~g-~~~v~gID~s~~----------------~~l~~~~da~~LPf~D~SFD 170 (518)
+.+..-++++.+|||||||+|..+..+.+.. ..+++++|+ +. ...++.+|..+ +++++ ||
T Consensus 174 ~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~-~~~~~-~D 250 (374)
T 1qzz_A 174 PADAYDWSAVRHVLDVGGGNGGMLAAIALRAPHLRGTLVEL-AGPAERARRRFADAGLADRVTVAEGDFFK-PLPVT-AD 250 (374)
T ss_dssp HHHTSCCTTCCEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHHHHHHHHHHTTCTTTEEEEECCTTS-CCSCC-EE
T ss_pred HHHhCCCCCCCEEEEECCCcCHHHHHHHHHCCCCEEEEEeC-HHHHHHHHHHHHhcCCCCceEEEeCCCCC-cCCCC-CC
Confidence 3333335678899999999999998887753 358999997 31 12346777765 55554 99
Q ss_pred EEEEcCceeeccCChH--HHHHHHHhcccCCcEEEEEe
Q 010086 171 FVFVGGARLEKASKPL--DFASEIVRTLKPEGFAVVHV 206 (518)
Q Consensus 171 ~V~s~~~~l~~~~dp~--~~l~Ei~RVLKPGG~lvi~~ 206 (518)
+|++..+ +||++++. ++++++.|+|||||++++..
T Consensus 251 ~v~~~~v-l~~~~~~~~~~~l~~~~~~L~pgG~l~i~e 287 (374)
T 1qzz_A 251 VVLLSFV-LLNWSDEDALTILRGCVRALEPGGRLLVLD 287 (374)
T ss_dssp EEEEESC-GGGSCHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred EEEEecc-ccCCCHHHHHHHHHHHHHhcCCCcEEEEEe
Confidence 9999998 99998875 89999999999999988753
No 161
>2bm8_A Cephalosporin hydroxylase CMCI; cephamycin biosynthesis; 2.5A {Streptomyces clavuligerus} SCOP: c.66.1.50 PDB: 2bm9_A* 2br5_A* 2br4_A* 2br3_A*
Probab=98.95 E-value=1.7e-09 Score=105.43 Aligned_cols=86 Identities=13% Similarity=0.227 Sum_probs=68.2
Q ss_pred CCCeEEEEcCCCCHhHHHHHhc----C-CCcEEEEecCCCC----------CcEEeccCCCC---CCCC-CceeEEEEcC
Q 010086 116 QSAKSLCVETQYGQDVFALKEI----G-VEDSIGIFKKSSK----------PLVISGEGHRI---PFDG-NTFDFVFVGG 176 (518)
Q Consensus 116 ~~~rvLDVGcGtG~~~~~L~~~----g-~~~v~gID~s~~~----------~l~~~~da~~L---Pf~D-~SFD~V~s~~ 176 (518)
++.+|||||||+|..+..|++. + ..+|+|||+++.. ..++++|+.++ |+.+ ++||+|++..
T Consensus 81 ~~~~VLDiG~GtG~~t~~la~~~~~~~~~~~V~gvD~s~~~l~~a~~~~~~v~~~~gD~~~~~~l~~~~~~~fD~I~~d~ 160 (236)
T 2bm8_A 81 RPRTIVELGVYNGGSLAWFRDLTKIMGIDCQVIGIDRDLSRCQIPASDMENITLHQGDCSDLTTFEHLREMAHPLIFIDN 160 (236)
T ss_dssp CCSEEEEECCTTSHHHHHHHHHHHHTTCCCEEEEEESCCTTCCCCGGGCTTEEEEECCSSCSGGGGGGSSSCSSEEEEES
T ss_pred CCCEEEEEeCCCCHHHHHHHHhhhhcCCCCEEEEEeCChHHHHHHhccCCceEEEECcchhHHHHHhhccCCCCEEEECC
Confidence 4679999999999999888765 2 3699999998631 22467888884 6644 4899999866
Q ss_pred ceeeccCChHHHHHHHHh-cccCCcEEEEE
Q 010086 177 ARLEKASKPLDFASEIVR-TLKPEGFAVVH 205 (518)
Q Consensus 177 ~~l~~~~dp~~~l~Ei~R-VLKPGG~lvi~ 205 (518)
+ | .++..++.|+.| +|||||++++.
T Consensus 161 ~---~-~~~~~~l~~~~r~~LkpGG~lv~~ 186 (236)
T 2bm8_A 161 A---H-ANTFNIMKWAVDHLLEEGDYFIIE 186 (236)
T ss_dssp S---C-SSHHHHHHHHHHHTCCTTCEEEEC
T ss_pred c---h-HhHHHHHHHHHHhhCCCCCEEEEE
Confidence 3 3 367789999998 99999999995
No 162
>2yxd_A Probable cobalt-precorrin-6Y C(15)-methyltransfer [decarboxylating]; alpha and beta protein (A/B) class; HET: MES; 2.30A {Methanocaldococcus jannaschii}
Probab=98.94 E-value=1.9e-09 Score=98.04 Aligned_cols=85 Identities=14% Similarity=0.140 Sum_probs=70.1
Q ss_pred CCCCCeEEEEcCCCCHhHHHHHhcCCCcEEEEecCCC---------------CCcEEeccCCCCCCCCCceeEEEEcCce
Q 010086 114 LSQSAKSLCVETQYGQDVFALKEIGVEDSIGIFKKSS---------------KPLVISGEGHRIPFDGNTFDFVFVGGAR 178 (518)
Q Consensus 114 l~~~~rvLDVGcGtG~~~~~L~~~g~~~v~gID~s~~---------------~~l~~~~da~~LPf~D~SFD~V~s~~~~ 178 (518)
+.++.+|||+|||+|..+..+.+ +..+++|+|+++. ...++.+|..+ ++++++||+|++...
T Consensus 33 ~~~~~~vLdiG~G~G~~~~~l~~-~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~d~~~-~~~~~~~D~i~~~~~- 109 (183)
T 2yxd_A 33 LNKDDVVVDVGCGSGGMTVEIAK-RCKFVYAIDYLDGAIEVTKQNLAKFNIKNCQIIKGRAED-VLDKLEFNKAFIGGT- 109 (183)
T ss_dssp CCTTCEEEEESCCCSHHHHHHHT-TSSEEEEEECSHHHHHHHHHHHHHTTCCSEEEEESCHHH-HGGGCCCSEEEECSC-
T ss_pred CCCCCEEEEeCCCCCHHHHHHHh-cCCeEEEEeCCHHHHHHHHHHHHHcCCCcEEEEECCccc-cccCCCCcEEEECCc-
Confidence 56788999999999999988887 4479999998741 12345778777 888899999999873
Q ss_pred eeccCChHHHHHHHHhcccCCcEEEEEec
Q 010086 179 LEKASKPLDFASEIVRTLKPEGFAVVHVR 207 (518)
Q Consensus 179 l~~~~dp~~~l~Ei~RVLKPGG~lvi~~~ 207 (518)
.++..+++++.|+ |||.+++...
T Consensus 110 ----~~~~~~l~~~~~~--~gG~l~~~~~ 132 (183)
T 2yxd_A 110 ----KNIEKIIEILDKK--KINHIVANTI 132 (183)
T ss_dssp ----SCHHHHHHHHHHT--TCCEEEEEES
T ss_pred ----ccHHHHHHHHhhC--CCCEEEEEec
Confidence 5688999999999 9999999764
No 163
>2ozv_A Hypothetical protein ATU0636; structural genomics, predicted transferase, predicted O-methyltransferase, PFAM PF05175; HET: MSE; 1.70A {Agrobacterium tumefaciens str}
Probab=98.94 E-value=6.7e-09 Score=102.38 Aligned_cols=95 Identities=8% Similarity=-0.010 Sum_probs=71.2
Q ss_pred CCCCCeEEEEcCCCCHhHHHHHhcC-CCcEEEEecCCC--------------C-----CcEEeccCCCC-------CCCC
Q 010086 114 LSQSAKSLCVETQYGQDVFALKEIG-VEDSIGIFKKSS--------------K-----PLVISGEGHRI-------PFDG 166 (518)
Q Consensus 114 l~~~~rvLDVGcGtG~~~~~L~~~g-~~~v~gID~s~~--------------~-----~l~~~~da~~L-------Pf~D 166 (518)
++++.+|||+|||+|..+..+++.. ..+++|+|+++. . ..++.+|..++ ++++
T Consensus 34 ~~~~~~VLDlG~G~G~~~l~la~~~~~~~v~gvDi~~~~~~~a~~n~~~~~~~~l~~~v~~~~~D~~~~~~~~~~~~~~~ 113 (260)
T 2ozv_A 34 DDRACRIADLGAGAGAAGMAVAARLEKAEVTLYERSQEMAEFARRSLELPDNAAFSARIEVLEADVTLRAKARVEAGLPD 113 (260)
T ss_dssp CCSCEEEEECCSSSSHHHHHHHHHCTTEEEEEEESSHHHHHHHHHHTTSGGGTTTGGGEEEEECCTTCCHHHHHHTTCCT
T ss_pred ccCCCEEEEeCChHhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHhhhhCCCcceEEEEeCCHHHHhhhhhhhccCC
Confidence 4577899999999999998887753 368999999731 1 22567888877 4789
Q ss_pred CceeEEEEcCceee----------------c-cCChHHHHHHHHhcccCCcEEEEEecC
Q 010086 167 NTFDFVFVGGARLE----------------K-ASKPLDFASEIVRTLKPEGFAVVHVRA 208 (518)
Q Consensus 167 ~SFD~V~s~~~~l~----------------~-~~dp~~~l~Ei~RVLKPGG~lvi~~~~ 208 (518)
++||+|+++--++. . ......+++++.|+|||||++++....
T Consensus 114 ~~fD~Vv~nPPy~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 172 (260)
T 2ozv_A 114 EHFHHVIMNPPYNDAGDRRTPDALKAEAHAMTEGLFEDWIRTASAIMVSGGQLSLISRP 172 (260)
T ss_dssp TCEEEEEECCCC---------------------CCHHHHHHHHHHHEEEEEEEEEEECG
T ss_pred CCcCEEEECCCCcCCCCCCCcCHHHHHHhhcCcCCHHHHHHHHHHHcCCCCEEEEEEcH
Confidence 99999999732111 1 123567899999999999999887643
No 164
>1i1n_A Protein-L-isoaspartate O-methyltransferase; S-adenosyl homocysteine, protein repair; HET: SAH; 1.50A {Homo sapiens} SCOP: c.66.1.7 PDB: 1kr5_A*
Probab=98.94 E-value=1.4e-09 Score=103.62 Aligned_cols=88 Identities=24% Similarity=0.346 Sum_probs=70.4
Q ss_pred CCCCCeEEEEcCCCCHhHHHHHhc-CC-CcEEEEecCCC--------------------CCcEEeccCCCCCCCCCceeE
Q 010086 114 LSQSAKSLCVETQYGQDVFALKEI-GV-EDSIGIFKKSS--------------------KPLVISGEGHRIPFDGNTFDF 171 (518)
Q Consensus 114 l~~~~rvLDVGcGtG~~~~~L~~~-g~-~~v~gID~s~~--------------------~~l~~~~da~~LPf~D~SFD~ 171 (518)
++++.+|||||||+|..+..+++. |. .+++|+|+++. ...++.+|+...+.++++||+
T Consensus 75 ~~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~ 154 (226)
T 1i1n_A 75 LHEGAKALDVGSGSGILTACFARMVGCTGKVIGIDHIKELVDDSVNNVRKDDPTLLSSGRVQLVVGDGRMGYAEEAPYDA 154 (226)
T ss_dssp SCTTCEEEEETCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHCTHHHHTSSEEEEESCGGGCCGGGCCEEE
T ss_pred CCCCCEEEEEcCCcCHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHhhcccccCCCcEEEEECCcccCcccCCCcCE
Confidence 678899999999999999888764 42 58999998741 123457888777777889999
Q ss_pred EEEcCceeeccCChHHHHHHHHhcccCCcEEEEEecC
Q 010086 172 VFVGGARLEKASKPLDFASEIVRTLKPEGFAVVHVRA 208 (518)
Q Consensus 172 V~s~~~~l~~~~dp~~~l~Ei~RVLKPGG~lvi~~~~ 208 (518)
|++... ++++ ++++.|+|||||++++.+..
T Consensus 155 i~~~~~-~~~~------~~~~~~~LkpgG~lv~~~~~ 184 (226)
T 1i1n_A 155 IHVGAA-APVV------PQALIDQLKPGGRLILPVGP 184 (226)
T ss_dssp EEECSB-BSSC------CHHHHHTEEEEEEEEEEESC
T ss_pred EEECCc-hHHH------HHHHHHhcCCCcEEEEEEec
Confidence 999886 7665 46899999999999998753
No 165
>1ws6_A Methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.50A {Thermus thermophilus} SCOP: c.66.1.46
Probab=98.94 E-value=2.7e-10 Score=102.87 Aligned_cols=92 Identities=13% Similarity=0.136 Sum_probs=69.4
Q ss_pred CCCCeEEEEcCCCCHhHHHHHhcCCCcEEEEecCCC--------------CCcEEeccCCC-CCC-C--CCceeEEEEcC
Q 010086 115 SQSAKSLCVETQYGQDVFALKEIGVEDSIGIFKKSS--------------KPLVISGEGHR-IPF-D--GNTFDFVFVGG 176 (518)
Q Consensus 115 ~~~~rvLDVGcGtG~~~~~L~~~g~~~v~gID~s~~--------------~~l~~~~da~~-LPf-~--D~SFD~V~s~~ 176 (518)
+++.+|||+|||+|..+..+++.+. .++|+|+++. ...++.+|+.+ ++. + +++||+|++..
T Consensus 40 ~~~~~vLD~GcG~G~~~~~l~~~~~-~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~D~i~~~~ 118 (171)
T 1ws6_A 40 PRRGRFLDPFAGSGAVGLEAASEGW-EAVLVEKDPEAVRLLKENVRRTGLGARVVALPVEVFLPEAKAQGERFTVAFMAP 118 (171)
T ss_dssp TTCCEEEEETCSSCHHHHHHHHTTC-EEEEECCCHHHHHHHHHHHHHHTCCCEEECSCHHHHHHHHHHTTCCEEEEEECC
T ss_pred cCCCeEEEeCCCcCHHHHHHHHCCC-eEEEEeCCHHHHHHHHHHHHHcCCceEEEeccHHHHHHhhhccCCceEEEEECC
Confidence 4678999999999999988888774 5999999741 23455677665 332 2 35899999987
Q ss_pred ceeeccCChHHHHHHHH--hcccCCcEEEEEecCCC
Q 010086 177 ARLEKASKPLDFASEIV--RTLKPEGFAVVHVRAKD 210 (518)
Q Consensus 177 ~~l~~~~dp~~~l~Ei~--RVLKPGG~lvi~~~~~~ 210 (518)
. ++ .+...+++++. |+|||||++++......
T Consensus 119 ~-~~--~~~~~~~~~~~~~~~L~~gG~~~~~~~~~~ 151 (171)
T 1ws6_A 119 P-YA--MDLAALFGELLASGLVEAGGLYVLQHPKDL 151 (171)
T ss_dssp C-TT--SCTTHHHHHHHHHTCEEEEEEEEEEEETTS
T ss_pred C-Cc--hhHHHHHHHHHhhcccCCCcEEEEEeCCcc
Confidence 5 54 45667777777 99999999999875443
No 166
>1u2z_A Histone-lysine N-methyltransferase, H3 lysine-79 specific; histone methyltransferase, nucleosome; HET: SAH; 2.20A {Saccharomyces cerevisiae} SCOP: c.66.1.31
Probab=98.93 E-value=1.4e-09 Score=115.75 Aligned_cols=102 Identities=13% Similarity=0.001 Sum_probs=73.6
Q ss_pred HHHHHHHHHcCCCCCCCeEEEEcCCCCHhHHHHHhc-CCCcEEEEecCCC----------------------CC--cEEe
Q 010086 102 SSVFQDLISEGYLSQSAKSLCVETQYGQDVFALKEI-GVEDSIGIFKKSS----------------------KP--LVIS 156 (518)
Q Consensus 102 ~~l~~~L~~~gll~~~~rvLDVGcGtG~~~~~L~~~-g~~~v~gID~s~~----------------------~~--l~~~ 156 (518)
+.++..+++...++++.+|||||||+|..+..+++. |...|+|||+++. .. .++.
T Consensus 228 p~~v~~ml~~l~l~~g~~VLDLGCGsG~la~~LA~~~g~~~V~GVDis~~~l~~A~~Ml~~ar~~~~~~Gl~~~nV~~i~ 307 (433)
T 1u2z_A 228 PNFLSDVYQQCQLKKGDTFMDLGSGVGNCVVQAALECGCALSFGCEIMDDASDLTILQYEELKKRCKLYGMRLNNVEFSL 307 (433)
T ss_dssp HHHHHHHHHHTTCCTTCEEEEESCTTSHHHHHHHHHHCCSEEEEEECCHHHHHHHHHHHHHHHHHHHHTTBCCCCEEEEE
T ss_pred HHHHHHHHHhcCCCCCCEEEEeCCCcCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHhHHHHHHHHHHcCCCCCceEEEE
Confidence 344444555445678999999999999999888874 6568999998742 01 1234
Q ss_pred ccCCCC--CC--CCCceeEEEEcCceeeccCChHHHHHHHHhcccCCcEEEEE
Q 010086 157 GEGHRI--PF--DGNTFDFVFVGGARLEKASKPLDFASEIVRTLKPEGFAVVH 205 (518)
Q Consensus 157 ~da~~L--Pf--~D~SFD~V~s~~~~l~~~~dp~~~l~Ei~RVLKPGG~lvi~ 205 (518)
++.... +| .+++||+|+++.. + +.+++..+++|+.|+|||||++++.
T Consensus 308 gD~~~~~~~~~~~~~~FDvIvvn~~-l-~~~d~~~~L~el~r~LKpGG~lVi~ 358 (433)
T 1u2z_A 308 KKSFVDNNRVAELIPQCDVILVNNF-L-FDEDLNKKVEKILQTAKVGCKIISL 358 (433)
T ss_dssp SSCSTTCHHHHHHGGGCSEEEECCT-T-CCHHHHHHHHHHHTTCCTTCEEEES
T ss_pred cCccccccccccccCCCCEEEEeCc-c-ccccHHHHHHHHHHhCCCCeEEEEe
Confidence 544332 23 3689999999765 4 3356678899999999999999885
No 167
>3mcz_A O-methyltransferase; adomet_mtases, S-adenosylmethionine-dependent methyltransfer structural genomics, PSI-2; HET: MSE; 1.90A {Burkholderia thailandensis}
Probab=98.93 E-value=2.9e-09 Score=108.55 Aligned_cols=98 Identities=12% Similarity=0.066 Sum_probs=75.0
Q ss_pred HHHHcCCCCC-CCeEEEEcCCCCHhHHHHHhc-CCCcEEEEecCCC---------------CCcEEeccCCCCC-CCCCc
Q 010086 107 DLISEGYLSQ-SAKSLCVETQYGQDVFALKEI-GVEDSIGIFKKSS---------------KPLVISGEGHRIP-FDGNT 168 (518)
Q Consensus 107 ~L~~~gll~~-~~rvLDVGcGtG~~~~~L~~~-g~~~v~gID~s~~---------------~~l~~~~da~~LP-f~D~S 168 (518)
.+++.--+.+ +.+|||||||+|..+..+.+. +..+++++|+... ...++.+|..+.+ +.++.
T Consensus 169 ~~l~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~ 248 (352)
T 3mcz_A 169 DVVSELGVFARARTVIDLAGGHGTYLAQVLRRHPQLTGQIWDLPTTRDAARKTIHAHDLGGRVEFFEKNLLDARNFEGGA 248 (352)
T ss_dssp HHHHTCGGGTTCCEEEEETCTTCHHHHHHHHHCTTCEEEEEECGGGHHHHHHHHHHTTCGGGEEEEECCTTCGGGGTTCC
T ss_pred HHHHhCCCcCCCCEEEEeCCCcCHHHHHHHHhCCCCeEEEEECHHHHHHHHHHHHhcCCCCceEEEeCCcccCcccCCCC
Confidence 4444433455 789999999999999888764 3368999998320 0224577877765 24566
Q ss_pred eeEEEEcCceeeccCCh--HHHHHHHHhcccCCcEEEEE
Q 010086 169 FDFVFVGGARLEKASKP--LDFASEIVRTLKPEGFAVVH 205 (518)
Q Consensus 169 FD~V~s~~~~l~~~~dp--~~~l~Ei~RVLKPGG~lvi~ 205 (518)
||+|++..+ +||++++ .++++++.|+|||||++++.
T Consensus 249 ~D~v~~~~v-lh~~~~~~~~~~l~~~~~~L~pgG~l~i~ 286 (352)
T 3mcz_A 249 ADVVMLNDC-LHYFDAREAREVIGHAAGLVKPGGALLIL 286 (352)
T ss_dssp EEEEEEESC-GGGSCHHHHHHHHHHHHHTEEEEEEEEEE
T ss_pred ccEEEEecc-cccCCHHHHHHHHHHHHHHcCCCCEEEEE
Confidence 999999998 9999876 68999999999999998886
No 168
>2xyq_A Putative 2'-O-methyl transferase; transferase-viral protein complex, rossman fold; HET: SAH; 2.00A {Sars coronavirus} PDB: 2xyv_A* 2xyr_A*
Probab=98.92 E-value=6.3e-09 Score=105.21 Aligned_cols=118 Identities=10% Similarity=0.025 Sum_probs=77.4
Q ss_pred HHHHHHHHH-HcCCCCCCCeEEEEcCCC------CHhHHHHHhcC-CCcEEEEecCCC--CCcE-EeccCCCCCCCCCce
Q 010086 101 YSSVFQDLI-SEGYLSQSAKSLCVETQY------GQDVFALKEIG-VEDSIGIFKKSS--KPLV-ISGEGHRIPFDGNTF 169 (518)
Q Consensus 101 ~~~l~~~L~-~~gll~~~~rvLDVGcGt------G~~~~~L~~~g-~~~v~gID~s~~--~~l~-~~~da~~LPf~D~SF 169 (518)
++.+.+.+. ....++++.+|||+|||+ |. ....+..+ ...|+|+|+++. ...+ +++|+.++|++ ++|
T Consensus 47 y~~l~~~l~~~~l~l~~g~~VLDLGcGsg~~~GpGs-~~~a~~~~~~~~V~gvDis~~v~~v~~~i~gD~~~~~~~-~~f 124 (290)
T 2xyq_A 47 YTQLCQYLNTLTLAVPYNMRVIHFGAGSDKGVAPGT-AVLRQWLPTGTLLVDSDLNDFVSDADSTLIGDCATVHTA-NKW 124 (290)
T ss_dssp HHHHHHHHTTSCCCCCTTCEEEEESCCCTTSBCHHH-HHHHHHSCTTCEEEEEESSCCBCSSSEEEESCGGGCCCS-SCE
T ss_pred HHHHHHHHHHhhcCCCCCCEEEEeCCCCCCCCCcHH-HHHHHHcCCCCEEEEEECCCCCCCCEEEEECccccCCcc-Ccc
Confidence 444444432 234578899999999955 55 22223344 368999999974 2346 88999998876 789
Q ss_pred eEEEEcCceeec--------c---CChHHHHHHHHhcccCCcEEEEEecCCCccCchhHhhhccC
Q 010086 170 DFVFVGGARLEK--------A---SKPLDFASEIVRTLKPEGFAVVHVRAKDEYSFNSFLDLFNS 223 (518)
Q Consensus 170 D~V~s~~~~l~~--------~---~dp~~~l~Ei~RVLKPGG~lvi~~~~~~~~s~~~~~~lf~~ 223 (518)
|+|+|..+ .++ . .....+++++.|+|||||.+++.+...... ..+..+++.
T Consensus 125 D~Vvsn~~-~~~~g~~~~d~~~~~~l~~~~l~~a~r~LkpGG~~v~~~~~~~~~--~~l~~~l~~ 186 (290)
T 2xyq_A 125 DLIISDMY-DPRTKHVTKENDSKEGFFTYLCGFIKQKLALGGSIAVKITEHSWN--ADLYKLMGH 186 (290)
T ss_dssp EEEEECCC-CCC---CCSCCCCCCTHHHHHHHHHHHHEEEEEEEEEEECSSSCC--HHHHHHHTT
T ss_pred cEEEEcCC-ccccccccccccchHHHHHHHHHHHHHhcCCCcEEEEEEeccCCH--HHHHHHHHH
Confidence 99999642 111 0 112368999999999999999965433222 345555444
No 169
>3reo_A (ISO)eugenol O-methyltransferase; directed evolution, saturation mutagenesis, regioselectivity transferase; HET: SAH EUG; 1.90A {Clarkia breweri} PDB: 3tky_A* 1kyz_A* 1kyw_A*
Probab=98.92 E-value=6.7e-09 Score=107.53 Aligned_cols=88 Identities=11% Similarity=0.031 Sum_probs=70.8
Q ss_pred CCCCCeEEEEcCCCCHhHHHHHhc-CCCcEEEEecCC------C--CCcEEeccCCCCCCCCCceeEEEEcCceeeccCC
Q 010086 114 LSQSAKSLCVETQYGQDVFALKEI-GVEDSIGIFKKS------S--KPLVISGEGHRIPFDGNTFDFVFVGGARLEKASK 184 (518)
Q Consensus 114 l~~~~rvLDVGcGtG~~~~~L~~~-g~~~v~gID~s~------~--~~l~~~~da~~LPf~D~SFD~V~s~~~~l~~~~d 184 (518)
+++..+|||||||+|..+..+.+. +..+++++|+.. . ...++.+|..+ |+|++ |+|++..+ +||+++
T Consensus 201 ~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~~~~~~~a~~~~~v~~~~~d~~~-~~p~~--D~v~~~~v-lh~~~~ 276 (368)
T 3reo_A 201 FEGLTTIVDVGGGTGAVASMIVAKYPSINAINFDLPHVIQDAPAFSGVEHLGGDMFD-GVPKG--DAIFIKWI-CHDWSD 276 (368)
T ss_dssp TTTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEECHHHHTTCCCCTTEEEEECCTTT-CCCCC--SEEEEESC-GGGBCH
T ss_pred ccCCCEEEEeCCCcCHHHHHHHHhCCCCEEEEEehHHHHHhhhhcCCCEEEecCCCC-CCCCC--CEEEEech-hhcCCH
Confidence 566789999999999999888764 335899999731 0 12356788877 88876 99999998 999987
Q ss_pred hH--HHHHHHHhcccCCcEEEEE
Q 010086 185 PL--DFASEIVRTLKPEGFAVVH 205 (518)
Q Consensus 185 p~--~~l~Ei~RVLKPGG~lvi~ 205 (518)
+. ++++++.|+|||||++++.
T Consensus 277 ~~~~~~l~~~~~~L~pgG~l~i~ 299 (368)
T 3reo_A 277 EHCLKLLKNCYAALPDHGKVIVA 299 (368)
T ss_dssp HHHHHHHHHHHHHSCTTCEEEEE
T ss_pred HHHHHHHHHHHHHcCCCCEEEEE
Confidence 64 6899999999999998886
No 170
>3opn_A Putative hemolysin; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics, nysgxrc; 2.05A {Lactococcus lactis subsp}
Probab=98.92 E-value=2.9e-09 Score=103.84 Aligned_cols=84 Identities=10% Similarity=0.019 Sum_probs=58.6
Q ss_pred CCCCCeEEEEcCCCCHhHHHHHhcCCCcEEEEecCCCC--------CcEE----------e-ccCCCCCCCCCceeEEEE
Q 010086 114 LSQSAKSLCVETQYGQDVFALKEIGVEDSIGIFKKSSK--------PLVI----------S-GEGHRIPFDGNTFDFVFV 174 (518)
Q Consensus 114 l~~~~rvLDVGcGtG~~~~~L~~~g~~~v~gID~s~~~--------~l~~----------~-~da~~LPf~D~SFD~V~s 174 (518)
..++.+|||||||||..+..|.+.|..+|+|||+++.. +.+. . ++....+|++.+||++++
T Consensus 35 ~~~g~~VLDiGcGtG~~t~~la~~g~~~V~gvDis~~ml~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~D~v~~ 114 (232)
T 3opn_A 35 EINGKTCLDIGSSTGGFTDVMLQNGAKLVYALDVGTNQLAWKIRSDERVVVMEQFNFRNAVLADFEQGRPSFTSIDVSFI 114 (232)
T ss_dssp CCTTCEEEEETCTTSHHHHHHHHTTCSEEEEECSSCCCCCHHHHTCTTEEEECSCCGGGCCGGGCCSCCCSEEEECCSSS
T ss_pred CCCCCEEEEEccCCCHHHHHHHhcCCCEEEEEcCCHHHHHHHHHhCccccccccceEEEeCHhHcCcCCCCEEEEEEEhh
Confidence 34567999999999999988888886699999998631 1110 0 122111234455665544
Q ss_pred cCceeeccCChHHHHHHHHhcccCCcEEEEEe
Q 010086 175 GGARLEKASKPLDFASEIVRTLKPEGFAVVHV 206 (518)
Q Consensus 175 ~~~~l~~~~dp~~~l~Ei~RVLKPGG~lvi~~ 206 (518)
. ...+++|+.|+|||||.+++.+
T Consensus 115 ~---------l~~~l~~i~rvLkpgG~lv~~~ 137 (232)
T 3opn_A 115 S---------LDLILPPLYEILEKNGEVAALI 137 (232)
T ss_dssp C---------GGGTHHHHHHHSCTTCEEEEEE
T ss_pred h---------HHHHHHHHHHhccCCCEEEEEE
Confidence 2 2578999999999999998864
No 171
>3dp7_A SAM-dependent methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research; 2.33A {Bacteroides vulgatus}
Probab=98.91 E-value=1.9e-09 Score=111.34 Aligned_cols=89 Identities=10% Similarity=0.048 Sum_probs=71.0
Q ss_pred CCCCeEEEEcCCCCHhHHHHHhc-CCCcEEEEecCC-----------C----CCcEEeccCCCC--CCCCCceeEEEEcC
Q 010086 115 SQSAKSLCVETQYGQDVFALKEI-GVEDSIGIFKKS-----------S----KPLVISGEGHRI--PFDGNTFDFVFVGG 176 (518)
Q Consensus 115 ~~~~rvLDVGcGtG~~~~~L~~~-g~~~v~gID~s~-----------~----~~l~~~~da~~L--Pf~D~SFD~V~s~~ 176 (518)
....+|||||||+|..+..+.+. +..+++++|+.. . ...++.+|..+. |+| ++||+|++..
T Consensus 178 ~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~p-~~~D~v~~~~ 256 (363)
T 3dp7_A 178 HHPKRLLDIGGNTGKWATQCVQYNKEVEVTIVDLPQQLEMMRKQTAGLSGSERIHGHGANLLDRDVPFP-TGFDAVWMSQ 256 (363)
T ss_dssp GCCSEEEEESCTTCHHHHHHHHHSTTCEEEEEECHHHHHHHHHHHTTCTTGGGEEEEECCCCSSSCCCC-CCCSEEEEES
T ss_pred cCCCEEEEeCCCcCHHHHHHHHhCCCCEEEEEeCHHHHHHHHHHHHhcCcccceEEEEccccccCCCCC-CCcCEEEEec
Confidence 35679999999999999888763 235899999731 0 123467888775 677 8899999999
Q ss_pred ceeeccCChH--HHHHHHHhcccCCcEEEEE
Q 010086 177 ARLEKASKPL--DFASEIVRTLKPEGFAVVH 205 (518)
Q Consensus 177 ~~l~~~~dp~--~~l~Ei~RVLKPGG~lvi~ 205 (518)
+ +|+++++. ++++++.|+|||||.+++.
T Consensus 257 v-lh~~~~~~~~~~l~~~~~~L~pgG~l~i~ 286 (363)
T 3dp7_A 257 F-LDCFSEEEVISILTRVAQSIGKDSKVYIM 286 (363)
T ss_dssp C-STTSCHHHHHHHHHHHHHHCCTTCEEEEE
T ss_pred h-hhhCCHHHHHHHHHHHHHhcCCCcEEEEE
Confidence 8 99988764 6799999999999998885
No 172
>2frn_A Hypothetical protein PH0793; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Pyrococcus horikoshii OT3} PDB: 3k6r_A 3a25_A* 3a26_A*
Probab=98.91 E-value=2.1e-09 Score=107.10 Aligned_cols=88 Identities=14% Similarity=0.120 Sum_probs=71.5
Q ss_pred CCCCCeEEEEcCCCCHhHHHHHhcCCCcEEEEecCCC--------------C--CcEEeccCCCCCCCCCceeEEEEcCc
Q 010086 114 LSQSAKSLCVETQYGQDVFALKEIGVEDSIGIFKKSS--------------K--PLVISGEGHRIPFDGNTFDFVFVGGA 177 (518)
Q Consensus 114 l~~~~rvLDVGcGtG~~~~~L~~~g~~~v~gID~s~~--------------~--~l~~~~da~~LPf~D~SFD~V~s~~~ 177 (518)
++++.+|||+|||+|..+..+++.|...|+|+|+++. . ..++.+|+.+++. +++||+|++...
T Consensus 123 ~~~~~~VLDlgcG~G~~~~~la~~~~~~V~~vD~s~~~~~~a~~n~~~n~~~~~v~~~~~D~~~~~~-~~~fD~Vi~~~p 201 (278)
T 2frn_A 123 AKPDELVVDMFAGIGHLSLPIAVYGKAKVIAIEKDPYTFKFLVENIHLNKVEDRMSAYNMDNRDFPG-ENIADRILMGYV 201 (278)
T ss_dssp CCTTCEEEETTCTTTTTHHHHHHHTCCEEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCTTTCCC-CSCEEEEEECCC
T ss_pred CCCCCEEEEecccCCHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEEECCHHHhcc-cCCccEEEECCc
Confidence 5778999999999999999888877447999999841 1 2256899999877 889999998542
Q ss_pred eeeccCChHHHHHHHHhcccCCcEEEEEec
Q 010086 178 RLEKASKPLDFASEIVRTLKPEGFAVVHVR 207 (518)
Q Consensus 178 ~l~~~~dp~~~l~Ei~RVLKPGG~lvi~~~ 207 (518)
.....++.++.|+|||||++++...
T Consensus 202 -----~~~~~~l~~~~~~LkpgG~l~~~~~ 226 (278)
T 2frn_A 202 -----VRTHEFIPKALSIAKDGAIIHYHNT 226 (278)
T ss_dssp -----SSGGGGHHHHHHHEEEEEEEEEEEE
T ss_pred -----hhHHHHHHHHHHHCCCCeEEEEEEe
Confidence 2346789999999999999988643
No 173
>1r18_A Protein-L-isoaspartate(D-aspartate)-O-methyltrans; methyltransferase, isomerization, protein repair, S-adenosyl homocysteine; HET: SAH; 2.20A {Drosophila melanogaster} SCOP: c.66.1.7
Probab=98.90 E-value=3.1e-09 Score=101.69 Aligned_cols=87 Identities=22% Similarity=0.378 Sum_probs=69.2
Q ss_pred CCCCCeEEEEcCCCCHhHHHHHh-cCC------CcEEEEecCCC--------------------CCcEEeccCCCCCCCC
Q 010086 114 LSQSAKSLCVETQYGQDVFALKE-IGV------EDSIGIFKKSS--------------------KPLVISGEGHRIPFDG 166 (518)
Q Consensus 114 l~~~~rvLDVGcGtG~~~~~L~~-~g~------~~v~gID~s~~--------------------~~l~~~~da~~LPf~D 166 (518)
++++.+|||||||+|..+..+++ .+. .+|+|+|+++. ...++.+|+.. ++++
T Consensus 82 ~~~~~~VLdiG~G~G~~~~~la~~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~-~~~~ 160 (227)
T 1r18_A 82 LKPGARILDVGSGSGYLTACFYRYIKAKGVDADTRIVGIEHQAELVRRSKANLNTDDRSMLDSGQLLIVEGDGRK-GYPP 160 (227)
T ss_dssp CCTTCEEEEESCTTSHHHHHHHHHHHHSCCCTTCEEEEEESCHHHHHHHHHHHHHHHHHHHHHTSEEEEESCGGG-CCGG
T ss_pred CCCCCEEEEECCCccHHHHHHHHhcccccCCccCEEEEEEcCHHHHHHHHHHHHhcCccccCCCceEEEECCccc-CCCc
Confidence 67889999999999999988776 332 48999998741 12245677776 6766
Q ss_pred -CceeEEEEcCceeeccCChHHHHHHHHhcccCCcEEEEEecC
Q 010086 167 -NTFDFVFVGGARLEKASKPLDFASEIVRTLKPEGFAVVHVRA 208 (518)
Q Consensus 167 -~SFD~V~s~~~~l~~~~dp~~~l~Ei~RVLKPGG~lvi~~~~ 208 (518)
++||+|++..+ ++|+. +++.++|||||++++.+..
T Consensus 161 ~~~fD~I~~~~~-~~~~~------~~~~~~LkpgG~lvi~~~~ 196 (227)
T 1r18_A 161 NAPYNAIHVGAA-APDTP------TELINQLASGGRLIVPVGP 196 (227)
T ss_dssp GCSEEEEEECSC-BSSCC------HHHHHTEEEEEEEEEEESC
T ss_pred CCCccEEEECCc-hHHHH------HHHHHHhcCCCEEEEEEec
Confidence 89999999887 77753 7899999999999998864
No 174
>1fp2_A Isoflavone O-methyltransferase; protein-product complex; HET: SAH HMO; 1.40A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpx_A* 2qyo_A*
Probab=98.90 E-value=4.2e-09 Score=107.90 Aligned_cols=87 Identities=10% Similarity=0.028 Sum_probs=71.2
Q ss_pred CCCCCeEEEEcCCCCHhHHHHHhc-CCCcEEEEecCCC---------CCcEEeccCCCCCCCCCceeEEEEcCceeeccC
Q 010086 114 LSQSAKSLCVETQYGQDVFALKEI-GVEDSIGIFKKSS---------KPLVISGEGHRIPFDGNTFDFVFVGGARLEKAS 183 (518)
Q Consensus 114 l~~~~rvLDVGcGtG~~~~~L~~~-g~~~v~gID~s~~---------~~l~~~~da~~LPf~D~SFD~V~s~~~~l~~~~ 183 (518)
++++.+|||||||+|..+..+.+. +..+++++|+ +. ...++.+|..+ |+|+ ||+|++..+ |||++
T Consensus 186 ~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~v~~~~~d~~~-~~p~--~D~v~~~~~-lh~~~ 260 (352)
T 1fp2_A 186 FDGLESIVDVGGGTGTTAKIICETFPKLKCIVFDR-PQVVENLSGSNNLTYVGGDMFT-SIPN--ADAVLLKYI-LHNWT 260 (352)
T ss_dssp HTTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHTTCCCBTTEEEEECCTTT-CCCC--CSEEEEESC-GGGSC
T ss_pred cccCceEEEeCCCccHHHHHHHHHCCCCeEEEeeC-HHHHhhcccCCCcEEEeccccC-CCCC--ccEEEeehh-hccCC
Confidence 456789999999999999888764 3358999998 31 12345778766 7764 999999998 99999
Q ss_pred ChH--HHHHHHHhcccC---CcEEEEE
Q 010086 184 KPL--DFASEIVRTLKP---EGFAVVH 205 (518)
Q Consensus 184 dp~--~~l~Ei~RVLKP---GG~lvi~ 205 (518)
++. ++++++.|+||| ||++++.
T Consensus 261 d~~~~~~l~~~~~~L~p~~~gG~l~i~ 287 (352)
T 1fp2_A 261 DKDCLRILKKCKEAVTNDGKRGKVTII 287 (352)
T ss_dssp HHHHHHHHHHHHHHHSGGGCCCEEEEE
T ss_pred HHHHHHHHHHHHHhCCCCCCCcEEEEE
Confidence 887 899999999999 9998886
No 175
>3b3j_A Histone-arginine methyltransferase CARM1; protein arginine methyltransferase 4, APO catalytic domain, regulator, mRNA processing; 2.55A {Rattus norvegicus}
Probab=98.89 E-value=2.1e-09 Score=115.68 Aligned_cols=91 Identities=15% Similarity=0.124 Sum_probs=72.2
Q ss_pred CCCCCeEEEEcCCCCHhHHHHHhcCCCcEEEEecCC---------------CCCcEEeccCCCCCCCCCceeEEEEcCce
Q 010086 114 LSQSAKSLCVETQYGQDVFALKEIGVEDSIGIFKKS---------------SKPLVISGEGHRIPFDGNTFDFVFVGGAR 178 (518)
Q Consensus 114 l~~~~rvLDVGcGtG~~~~~L~~~g~~~v~gID~s~---------------~~~l~~~~da~~LPf~D~SFD~V~s~~~~ 178 (518)
..++.+|||||||+|..+..+++.|..+|+|+|+++ ....++.+|.++++++ ++||+|+|...
T Consensus 156 ~~~~~~VLDiGcGtG~la~~la~~~~~~V~gvD~s~~l~~A~~~~~~~gl~~~v~~~~~d~~~~~~~-~~fD~Ivs~~~- 233 (480)
T 3b3j_A 156 DFKDKIVLDVGCGSGILSFFAAQAGARKIYAVEASTMAQHAEVLVKSNNLTDRIVVIPGKVEEVSLP-EQVDIIISEPM- 233 (480)
T ss_dssp GTTTCEEEEESCSTTHHHHHHHHTTCSEEEEEECHHHHHHHHHHHHHTTCTTTEEEEESCTTTCCCS-SCEEEEECCCC-
T ss_pred hcCCCEEEEecCcccHHHHHHHHcCCCEEEEEEcHHHHHHHHHHHHHcCCCCcEEEEECchhhCccC-CCeEEEEEeCc-
Confidence 456789999999999999888887767999999974 0123568899888876 58999999764
Q ss_pred eeccCCh--HHHHHHHHhcccCCcEEEEEe
Q 010086 179 LEKASKP--LDFASEIVRTLKPEGFAVVHV 206 (518)
Q Consensus 179 l~~~~dp--~~~l~Ei~RVLKPGG~lvi~~ 206 (518)
++|..+. ...+.++.|+|||||++++..
T Consensus 234 ~~~~~~e~~~~~l~~~~~~LkpgG~li~~~ 263 (480)
T 3b3j_A 234 GYMLFNERMLESYLHAKKYLKPSGNMFPTI 263 (480)
T ss_dssp HHHHTCHHHHHHHHHGGGGEEEEEEEESCE
T ss_pred hHhcCcHHHHHHHHHHHHhcCCCCEEEEEe
Confidence 5666544 467789999999999998643
No 176
>1tw3_A COMT, carminomycin 4-O-methyltransferase; anthracycline, methylate, tailoring enzyme, polyketide, S-adenosyl-L-homocystein; HET: SAH ERT; 2.35A {Streptomyces peucetius} SCOP: a.4.5.29 c.66.1.12 PDB: 1tw2_A*
Probab=98.88 E-value=5.3e-09 Score=107.00 Aligned_cols=89 Identities=15% Similarity=0.114 Sum_probs=70.4
Q ss_pred CCCCCCeEEEEcCCCCHhHHHHHhcC-CCcEEEEecCCC----------------CCcEEeccCCCCCCCCCceeEEEEc
Q 010086 113 YLSQSAKSLCVETQYGQDVFALKEIG-VEDSIGIFKKSS----------------KPLVISGEGHRIPFDGNTFDFVFVG 175 (518)
Q Consensus 113 ll~~~~rvLDVGcGtG~~~~~L~~~g-~~~v~gID~s~~----------------~~l~~~~da~~LPf~D~SFD~V~s~ 175 (518)
-++++.+|||||||+|..+..+.+.+ ...++++|+ +. ...++.+|..+ +++++ ||+|++.
T Consensus 180 ~~~~~~~vLDvG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~-~~~~~-~D~v~~~ 256 (360)
T 1tw3_A 180 DWTNVRHVLDVGGGKGGFAAAIARRAPHVSATVLEM-AGTVDTARSYLKDEGLSDRVDVVEGDFFE-PLPRK-ADAIILS 256 (360)
T ss_dssp CCTTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-TTHHHHHHHHHHHTTCTTTEEEEECCTTS-CCSSC-EEEEEEE
T ss_pred CCccCcEEEEeCCcCcHHHHHHHHhCCCCEEEEecC-HHHHHHHHHHHHhcCCCCceEEEeCCCCC-CCCCC-ccEEEEc
Confidence 35678899999999999998887653 358999996 31 12345777755 55554 9999999
Q ss_pred CceeeccCChH--HHHHHHHhcccCCcEEEEE
Q 010086 176 GARLEKASKPL--DFASEIVRTLKPEGFAVVH 205 (518)
Q Consensus 176 ~~~l~~~~dp~--~~l~Ei~RVLKPGG~lvi~ 205 (518)
.+ +||++++. ++++++.|+|||||++++.
T Consensus 257 ~v-l~~~~~~~~~~~l~~~~~~L~pgG~l~i~ 287 (360)
T 1tw3_A 257 FV-LLNWPDHDAVRILTRCAEALEPGGRILIH 287 (360)
T ss_dssp SC-GGGSCHHHHHHHHHHHHHTEEEEEEEEEE
T ss_pred cc-ccCCCHHHHHHHHHHHHHhcCCCcEEEEE
Confidence 98 99998774 7899999999999998876
No 177
>2yvl_A TRMI protein, hypothetical protein; tRNA, methyltransferase, S-adenosylmethionine, structural GE NPPSFA; HET: SAM; 2.20A {Aquifex aeolicus}
Probab=98.88 E-value=5.9e-09 Score=100.23 Aligned_cols=93 Identities=12% Similarity=0.094 Sum_probs=72.8
Q ss_pred HHHcCCCCCCCeEEEEcCCCCHhHHHHHhcCCCcEEEEecCCC----------------CCcEEeccCCCCCCCCCceeE
Q 010086 108 LISEGYLSQSAKSLCVETQYGQDVFALKEIGVEDSIGIFKKSS----------------KPLVISGEGHRIPFDGNTFDF 171 (518)
Q Consensus 108 L~~~gll~~~~rvLDVGcGtG~~~~~L~~~g~~~v~gID~s~~----------------~~l~~~~da~~LPf~D~SFD~ 171 (518)
+.....+.++.+|||+|||+|..+..+++.+ .+++++|+++. ...+..+|..+..+++++||+
T Consensus 83 ~~~~~~~~~~~~vldiG~G~G~~~~~l~~~~-~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~ 161 (248)
T 2yvl_A 83 IALKLNLNKEKRVLEFGTGSGALLAVLSEVA-GEVWTFEAVEEFYKTAQKNLKKFNLGKNVKFFNVDFKDAEVPEGIFHA 161 (248)
T ss_dssp HHHHTTCCTTCEEEEECCTTSHHHHHHHHHS-SEEEEECSCHHHHHHHHHHHHHTTCCTTEEEECSCTTTSCCCTTCBSE
T ss_pred HHHhcCCCCCCEEEEeCCCccHHHHHHHHhC-CEEEEEecCHHHHHHHHHHHHHcCCCCcEEEEEcChhhcccCCCcccE
Confidence 3344446788999999999999998887764 79999998741 122456777775447889999
Q ss_pred EEEcCceeeccCChHHHHHHHHhcccCCcEEEEEec
Q 010086 172 VFVGGARLEKASKPLDFASEIVRTLKPEGFAVVHVR 207 (518)
Q Consensus 172 V~s~~~~l~~~~dp~~~l~Ei~RVLKPGG~lvi~~~ 207 (518)
|++.. ++|..+++++.|+|||||.+++...
T Consensus 162 v~~~~------~~~~~~l~~~~~~L~~gG~l~~~~~ 191 (248)
T 2yvl_A 162 AFVDV------REPWHYLEKVHKSLMEGAPVGFLLP 191 (248)
T ss_dssp EEECS------SCGGGGHHHHHHHBCTTCEEEEEES
T ss_pred EEECC------cCHHHHHHHHHHHcCCCCEEEEEeC
Confidence 99842 4678899999999999999999875
No 178
>3p9c_A Caffeic acid O-methyltransferase; S-adenosylmethionine dependent O-methyltransferase; HET: SAH; 1.80A {Lolium perenne} PDB: 3p9i_A* 3p9k_A*
Probab=98.88 E-value=1.1e-08 Score=105.77 Aligned_cols=88 Identities=13% Similarity=0.081 Sum_probs=71.1
Q ss_pred CCCCCeEEEEcCCCCHhHHHHHhc-CCCcEEEEecCC------C--CCcEEeccCCCCCCCCCceeEEEEcCceeeccCC
Q 010086 114 LSQSAKSLCVETQYGQDVFALKEI-GVEDSIGIFKKS------S--KPLVISGEGHRIPFDGNTFDFVFVGGARLEKASK 184 (518)
Q Consensus 114 l~~~~rvLDVGcGtG~~~~~L~~~-g~~~v~gID~s~------~--~~l~~~~da~~LPf~D~SFD~V~s~~~~l~~~~d 184 (518)
+++..+|||||||+|..+..+.+. +..+++++|+.. . ...++.+|..+ |+|++ |+|++..+ +||+++
T Consensus 199 ~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~~~~~~~a~~~~~v~~~~~D~~~-~~p~~--D~v~~~~v-lh~~~d 274 (364)
T 3p9c_A 199 FEGLGTLVDVGGGVGATVAAIAAHYPTIKGVNFDLPHVISEAPQFPGVTHVGGDMFK-EVPSG--DTILMKWI-LHDWSD 274 (364)
T ss_dssp TTTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEECHHHHTTCCCCTTEEEEECCTTT-CCCCC--SEEEEESC-GGGSCH
T ss_pred ccCCCEEEEeCCCCCHHHHHHHHHCCCCeEEEecCHHHHHhhhhcCCeEEEeCCcCC-CCCCC--CEEEehHH-hccCCH
Confidence 567789999999999999888763 335899999831 0 12356788887 88876 99999998 999876
Q ss_pred hH--HHHHHHHhcccCCcEEEEE
Q 010086 185 PL--DFASEIVRTLKPEGFAVVH 205 (518)
Q Consensus 185 p~--~~l~Ei~RVLKPGG~lvi~ 205 (518)
+. +++++++|+|||||++++.
T Consensus 275 ~~~~~~L~~~~~~L~pgG~l~i~ 297 (364)
T 3p9c_A 275 QHCATLLKNCYDALPAHGKVVLV 297 (364)
T ss_dssp HHHHHHHHHHHHHSCTTCEEEEE
T ss_pred HHHHHHHHHHHHHcCCCCEEEEE
Confidence 53 7899999999999998886
No 179
>2pbf_A Protein-L-isoaspartate O-methyltransferase beta-A methyltransferase; protein repair, isoaspartyl formation, P. falciparum; HET: SAH; 2.00A {Plasmodium falciparum}
Probab=98.88 E-value=3.6e-09 Score=100.81 Aligned_cols=89 Identities=15% Similarity=0.161 Sum_probs=71.1
Q ss_pred CCCCCCeEEEEcCCCCHhHHHHHhcCC------CcEEEEecCCC--------------------CCcEEeccCCCCC---
Q 010086 113 YLSQSAKSLCVETQYGQDVFALKEIGV------EDSIGIFKKSS--------------------KPLVISGEGHRIP--- 163 (518)
Q Consensus 113 ll~~~~rvLDVGcGtG~~~~~L~~~g~------~~v~gID~s~~--------------------~~l~~~~da~~LP--- 163 (518)
.++++.+|||||||+|..+..+++... .+++|+|+++. ...++.+|+.+.+
T Consensus 77 ~~~~~~~VLdiG~G~G~~~~~la~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~ 156 (227)
T 2pbf_A 77 VLKPGSRAIDVGSGSGYLTVCMAIKMNVLENKNSYVIGLERVKDLVNFSLENIKRDKPELLKIDNFKIIHKNIYQVNEEE 156 (227)
T ss_dssp TSCTTCEEEEESCTTSHHHHHHHHHTTTTTCTTCEEEEEESCHHHHHHHHHHHHHHCGGGGSSTTEEEEECCGGGCCHHH
T ss_pred hCCCCCEEEEECCCCCHHHHHHHHHhcccCCCCCEEEEEeCCHHHHHHHHHHHHHcCccccccCCEEEEECChHhccccc
Confidence 367889999999999999988877532 48999998731 1234678887766
Q ss_pred -CCCCceeEEEEcCceeeccCChHHHHHHHHhcccCCcEEEEEecC
Q 010086 164 -FDGNTFDFVFVGGARLEKASKPLDFASEIVRTLKPEGFAVVHVRA 208 (518)
Q Consensus 164 -f~D~SFD~V~s~~~~l~~~~dp~~~l~Ei~RVLKPGG~lvi~~~~ 208 (518)
+++++||+|++... ++++ ++++.++|||||++++.+..
T Consensus 157 ~~~~~~fD~I~~~~~-~~~~------~~~~~~~LkpgG~lv~~~~~ 195 (227)
T 2pbf_A 157 KKELGLFDAIHVGAS-ASEL------PEILVDLLAENGKLIIPIEE 195 (227)
T ss_dssp HHHHCCEEEEEECSB-BSSC------CHHHHHHEEEEEEEEEEEEE
T ss_pred CccCCCcCEEEECCc-hHHH------HHHHHHhcCCCcEEEEEEcc
Confidence 67889999999886 7765 47889999999999998754
No 180
>1o9g_A RRNA methyltransferase; antibiotic resistance, Se-MAD; 1.5A {Streptomyces viridochromogenes} SCOP: c.66.1.29 PDB: 1o9h_A
Probab=98.87 E-value=3.9e-09 Score=102.67 Aligned_cols=89 Identities=10% Similarity=0.041 Sum_probs=65.6
Q ss_pred CCCCeEEEEcCCCCHhHHHHHhc---CCCcEEEEecCCC-----------C-----------------------------
Q 010086 115 SQSAKSLCVETQYGQDVFALKEI---GVEDSIGIFKKSS-----------K----------------------------- 151 (518)
Q Consensus 115 ~~~~rvLDVGcGtG~~~~~L~~~---g~~~v~gID~s~~-----------~----------------------------- 151 (518)
.++.+|||+|||+|..+..+++. +..+++|+|+++. .
T Consensus 50 ~~~~~vLD~gcGsG~~~~~la~~~~~~~~~v~gvDis~~~l~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 129 (250)
T 1o9g_A 50 DGPVTLWDPCCGSGYLLTVLGLLHRRSLRQVIASDVDPAPLELAAKNLALLSPAGLTARELERREQSERFGKPSYLEAAQ 129 (250)
T ss_dssp CSCEEEEETTCTTSHHHHHHHHHTGGGEEEEEEEESCHHHHHHHHHHHHTTSHHHHHHHHHHHHHHHHHHCCHHHHHHHH
T ss_pred CCCCeEEECCCCCCHHHHHHHHHhccCCCeEEEEECCHHHHHHHHHHHHHhhhccccccchhhhhhhhhcccccchhhhh
Confidence 35679999999999998877764 2358999999741 1
Q ss_pred ----Cc-------------EEeccCCCCCC------CCCceeEEEEcCceeeccCC---------hHHHHHHHHhcccCC
Q 010086 152 ----PL-------------VISGEGHRIPF------DGNTFDFVFVGGARLEKASK---------PLDFASEIVRTLKPE 199 (518)
Q Consensus 152 ----~l-------------~~~~da~~LPf------~D~SFD~V~s~~~~l~~~~d---------p~~~l~Ei~RVLKPG 199 (518)
.. +.++|..+ ++ ++++||+|+|... +.+..+ ...+++++.|+||||
T Consensus 130 ~~~~v~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~fD~Iv~npp-~~~~~~~~~~~~~~~~~~~l~~~~~~Lkpg 207 (250)
T 1o9g_A 130 AARRLRERLTAEGGALPCAIRTADVFD-PRALSAVLAGSAPDVVLTDLP-YGERTHWEGQVPGQPVAGLLRSLASALPAH 207 (250)
T ss_dssp HHHHHHHHHHHTTSSCCEEEEECCTTC-GGGHHHHHTTCCCSEEEEECC-GGGSSSSSSCCCHHHHHHHHHHHHHHSCTT
T ss_pred hhhhhhhhccccccccccceeeccccc-ccccccccCCCCceEEEeCCC-eeccccccccccccHHHHHHHHHHHhcCCC
Confidence 11 66677765 33 4558999999764 333322 347899999999999
Q ss_pred cEEEEE
Q 010086 200 GFAVVH 205 (518)
Q Consensus 200 G~lvi~ 205 (518)
|++++.
T Consensus 208 G~l~~~ 213 (250)
T 1o9g_A 208 AVIAVT 213 (250)
T ss_dssp CEEEEE
T ss_pred cEEEEe
Confidence 999983
No 181
>1o54_A SAM-dependent O-methyltransferase; TM0748, structural genomi PSI, protein structure initiative, joint center for structu genomics; 1.65A {Thermotoga maritima} SCOP: c.66.1.13
Probab=98.85 E-value=4.6e-09 Score=103.84 Aligned_cols=95 Identities=13% Similarity=0.119 Sum_probs=74.2
Q ss_pred HHHHHcCCCCCCCeEEEEcCCCCHhHHHHHhc-C-CCcEEEEecCCC----------------CCcEEeccCCCCCCCCC
Q 010086 106 QDLISEGYLSQSAKSLCVETQYGQDVFALKEI-G-VEDSIGIFKKSS----------------KPLVISGEGHRIPFDGN 167 (518)
Q Consensus 106 ~~L~~~gll~~~~rvLDVGcGtG~~~~~L~~~-g-~~~v~gID~s~~----------------~~l~~~~da~~LPf~D~ 167 (518)
..++....+.++.+|||+|||+|..+..+++. + ..+++++|+++. ...+..+|..+. ++++
T Consensus 102 ~~i~~~~~~~~~~~VLDiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~-~~~~ 180 (277)
T 1o54_A 102 SFIAMMLDVKEGDRIIDTGVGSGAMCAVLARAVGSSGKVFAYEKREEFAKLAESNLTKWGLIERVTIKVRDISEG-FDEK 180 (277)
T ss_dssp HHHHHHTTCCTTCEEEEECCTTSHHHHHHHHHTTTTCEEEEECCCHHHHHHHHHHHHHTTCGGGEEEECCCGGGC-CSCC
T ss_pred HHHHHHhCCCCCCEEEEECCcCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHcCCCCCEEEEECCHHHc-ccCC
Confidence 34444445788999999999999999888765 4 469999998741 112456777765 7888
Q ss_pred ceeEEEEcCceeeccCChHHHHHHHHhcccCCcEEEEEec
Q 010086 168 TFDFVFVGGARLEKASKPLDFASEIVRTLKPEGFAVVHVR 207 (518)
Q Consensus 168 SFD~V~s~~~~l~~~~dp~~~l~Ei~RVLKPGG~lvi~~~ 207 (518)
+||+|++. .++|..+++++.|+|||||++++...
T Consensus 181 ~~D~V~~~------~~~~~~~l~~~~~~L~pgG~l~~~~~ 214 (277)
T 1o54_A 181 DVDALFLD------VPDPWNYIDKCWEALKGGGRFATVCP 214 (277)
T ss_dssp SEEEEEEC------CSCGGGTHHHHHHHEEEEEEEEEEES
T ss_pred ccCEEEEC------CcCHHHHHHHHHHHcCCCCEEEEEeC
Confidence 99999983 25688899999999999999998764
No 182
>2b3t_A Protein methyltransferase HEMK; translation termination, methylation, conformational changes; HET: SAH; 3.10A {Escherichia coli} SCOP: c.66.1.30 PDB: 1t43_A*
Probab=98.84 E-value=1.2e-08 Score=100.79 Aligned_cols=93 Identities=13% Similarity=0.155 Sum_probs=68.6
Q ss_pred CCCCeEEEEcCCCCHhHHHHHh-cCCCcEEEEecCCC---------------CCcEEeccCCCCCCCCCceeEEEEcCce
Q 010086 115 SQSAKSLCVETQYGQDVFALKE-IGVEDSIGIFKKSS---------------KPLVISGEGHRIPFDGNTFDFVFVGGAR 178 (518)
Q Consensus 115 ~~~~rvLDVGcGtG~~~~~L~~-~g~~~v~gID~s~~---------------~~l~~~~da~~LPf~D~SFD~V~s~~~~ 178 (518)
.++.+|||+|||+|..+..+++ .+..+++|+|+++. ...++.+|..+ ++++++||+|++..-+
T Consensus 108 ~~~~~vLDlG~GsG~~~~~la~~~~~~~v~~vD~s~~~l~~a~~n~~~~~~~~v~~~~~d~~~-~~~~~~fD~Iv~npPy 186 (276)
T 2b3t_A 108 EQPCRILDLGTGTGAIALALASERPDCEIIAVDRMPDAVSLAQRNAQHLAIKNIHILQSDWFS-ALAGQQFAMIVSNPPY 186 (276)
T ss_dssp SSCCEEEEETCTTSHHHHHHHHHCTTSEEEEECSSHHHHHHHHHHHHHHTCCSEEEECCSTTG-GGTTCCEEEEEECCCC
T ss_pred cCCCEEEEecCCccHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEEcchhh-hcccCCccEEEECCCC
Confidence 5678999999999999988875 34479999999841 12345677765 4567899999997320
Q ss_pred ------------eecc------------CChHHHHHHHHhcccCCcEEEEEecC
Q 010086 179 ------------LEKA------------SKPLDFASEIVRTLKPEGFAVVHVRA 208 (518)
Q Consensus 179 ------------l~~~------------~dp~~~l~Ei~RVLKPGG~lvi~~~~ 208 (518)
++|- .+...+++++.|+|||||++++..+.
T Consensus 187 ~~~~~~~l~~~v~~~~p~~al~~~~~g~~~~~~~l~~~~~~LkpgG~l~~~~~~ 240 (276)
T 2b3t_A 187 IDEQDPHLQQGDVRFEPLTALVAADSGMADIVHIIEQSRNALVSGGFLLLEHGW 240 (276)
T ss_dssp BCTTCHHHHSSGGGSSCSTTTBCHHHHTHHHHHHHHHHGGGEEEEEEEEEECCS
T ss_pred CCccccccChhhhhcCcHHHHcCCCcHHHHHHHHHHHHHHhcCCCCEEEEEECc
Confidence 2221 12357889999999999999998653
No 183
>3bzb_A Uncharacterized protein; RED ALGA, protein structure initiat center for eukaryotic structural genomics, CESG, structural genomics; 2.79A {Cyanidioschyzon merolae}
Probab=98.83 E-value=2.2e-09 Score=107.01 Aligned_cols=118 Identities=14% Similarity=0.095 Sum_probs=74.3
Q ss_pred hhccCChhHHHHHhhHHHHHHHHHHcCCCCCCCeEEEEcCCCCHhHHHHHhcCCCcEEEEec-CCC--------------
Q 010086 86 RDMYTSKEWIKAVNFYSSVFQDLISEGYLSQSAKSLCVETQYGQDVFALKEIGVEDSIGIFK-KSS-------------- 150 (518)
Q Consensus 86 ~~~w~s~~wr~~v~~~~~l~~~L~~~gll~~~~rvLDVGcGtG~~~~~L~~~g~~~v~gID~-s~~-------------- 150 (518)
..+|...-|.....+ .+.+.......++.+|||||||+|..+..+++.|..+|+|+|+ ++.
T Consensus 53 ~~~~g~~~~~~~~~l----~~~l~~~~~~~~~~~vLDlG~G~G~~~~~~a~~~~~~v~~~D~s~~~~~~~a~~n~~~N~~ 128 (281)
T 3bzb_A 53 HPLWTSHVWSGARAL----ADTLCWQPELIAGKTVCELGAGAGLVSIVAFLAGADQVVATDYPDPEILNSLESNIREHTA 128 (281)
T ss_dssp ---------CHHHHH----HHHHHHCGGGTTTCEEEETTCTTSHHHHHHHHTTCSEEEEEECSCHHHHHHHHHHHHTTCC
T ss_pred CCCCCceeecHHHHH----HHHHHhcchhcCCCeEEEecccccHHHHHHHHcCCCEEEEEeCCCHHHHHHHHHHHHHhhh
Confidence 456666666443222 2222232223577899999999999998888887569999999 531
Q ss_pred C-----------CcEEeccCCC-C-CC----CCCceeEEEEcCceeeccCChHHHHHHHHhccc---C--CcEEEEEecC
Q 010086 151 K-----------PLVISGEGHR-I-PF----DGNTFDFVFVGGARLEKASKPLDFASEIVRTLK---P--EGFAVVHVRA 208 (518)
Q Consensus 151 ~-----------~l~~~~da~~-L-Pf----~D~SFD~V~s~~~~l~~~~dp~~~l~Ei~RVLK---P--GG~lvi~~~~ 208 (518)
. ..+...+..+ . .+ ++++||+|++..+ ++|..++..+++++.|+|| | ||++++....
T Consensus 129 ~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~fD~Ii~~dv-l~~~~~~~~ll~~l~~~Lk~~~p~~gG~l~v~~~~ 207 (281)
T 3bzb_A 129 NSCSSETVKRASPKVVPYRWGDSPDSLQRCTGLQRFQVVLLADL-LSFHQAHDALLRSVKMLLALPANDPTAVALVTFTH 207 (281)
T ss_dssp ----------CCCEEEECCTTSCTHHHHHHHSCSSBSEEEEESC-CSCGGGHHHHHHHHHHHBCCTTTCTTCEEEEEECC
T ss_pred hhcccccCCCCCeEEEEecCCCccHHHHhhccCCCCCEEEEeCc-ccChHHHHHHHHHHHHHhcccCCCCCCEEEEEEEe
Confidence 0 0111111111 0 11 4689999999887 8888888899999999999 9 9998776543
No 184
>3dr5_A Putative O-methyltransferase; Q8NRD3, CGL1119, PF01596, CGR117, NESG, structural genomics, PSI-2, protein structure initiative; 2.25A {Corynebacterium glutamicum}
Probab=98.82 E-value=3.6e-09 Score=102.19 Aligned_cols=97 Identities=10% Similarity=0.077 Sum_probs=69.3
Q ss_pred HHHHHHcCCCCCCCeEEEEcCCCCHhHHHHHh-cC-CCcEEEEecCCC--------------C---CcEEeccCCCC-C-
Q 010086 105 FQDLISEGYLSQSAKSLCVETQYGQDVFALKE-IG-VEDSIGIFKKSS--------------K---PLVISGEGHRI-P- 163 (518)
Q Consensus 105 ~~~L~~~gll~~~~rvLDVGcGtG~~~~~L~~-~g-~~~v~gID~s~~--------------~---~l~~~~da~~L-P- 163 (518)
+..|....-.+++.+|||||||+|..+..+++ .+ ..+++++|+++. . ..++.+|+.+. |
T Consensus 45 l~~l~~~~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~~i~~~~gda~~~l~~ 124 (221)
T 3dr5_A 45 LTTLAATTNGNGSTGAIAITPAAGLVGLYILNGLADNTTLTCIDPESEHQRQAKALFREAGYSPSRVRFLLSRPLDVMSR 124 (221)
T ss_dssp HHHHHHHSCCTTCCEEEEESTTHHHHHHHHHHHSCTTSEEEEECSCHHHHHHHHHHHHHTTCCGGGEEEECSCHHHHGGG
T ss_pred HHHHHHhhCCCCCCCEEEEcCCchHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCcCcEEEEEcCHHHHHHH
Confidence 33333332234456999999999999988876 32 369999999741 1 22456776554 3
Q ss_pred CCCCceeEEEEcCceeeccCChHHHHHHHHhcccCCcEEEEE
Q 010086 164 FDGNTFDFVFVGGARLEKASKPLDFASEIVRTLKPEGFAVVH 205 (518)
Q Consensus 164 f~D~SFD~V~s~~~~l~~~~dp~~~l~Ei~RVLKPGG~lvi~ 205 (518)
+++++||+|++... . .+...+++++.|+|||||++++.
T Consensus 125 ~~~~~fD~V~~d~~-~---~~~~~~l~~~~~~LkpGG~lv~d 162 (221)
T 3dr5_A 125 LANDSYQLVFGQVS-P---MDLKALVDAAWPLLRRGGALVLA 162 (221)
T ss_dssp SCTTCEEEEEECCC-T---TTHHHHHHHHHHHEEEEEEEEET
T ss_pred hcCCCcCeEEEcCc-H---HHHHHHHHHHHHHcCCCcEEEEe
Confidence 45899999998653 2 34567899999999999999984
No 185
>3u81_A Catechol O-methyltransferase; neurotransmitter degradation, transferase transferase inhibitor complex; HET: SAH; 1.13A {Rattus norvegicus} SCOP: c.66.1.1 PDB: 3nwe_A* 3oe5_A* 3ozr_A* 3oe4_A* 3ozt_A* 3ozs_A* 3r6t_A* 3hvi_A* 1jr4_A* 1vid_A* 1h1d_A* 2cl5_A* 3hvh_A* 3hvj_A* 3hvk_A* 3nw9_A* 3nwb_A* 3s68_A* 2zlb_A 2zth_A* ...
Probab=98.81 E-value=2.6e-09 Score=101.96 Aligned_cols=89 Identities=12% Similarity=0.131 Sum_probs=66.9
Q ss_pred CCCCeEEEEcCCCCHhHHHHHhc-C-CCcEEEEecCCC----------------CCcEEeccCCC-CCCC-----CCcee
Q 010086 115 SQSAKSLCVETQYGQDVFALKEI-G-VEDSIGIFKKSS----------------KPLVISGEGHR-IPFD-----GNTFD 170 (518)
Q Consensus 115 ~~~~rvLDVGcGtG~~~~~L~~~-g-~~~v~gID~s~~----------------~~l~~~~da~~-LPf~-----D~SFD 170 (518)
.++.+|||||||+|..+..+++. + ..+|+++|+++. ...++.+|+.+ +|.. .++||
T Consensus 57 ~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~l~~~~~~~~~~~fD 136 (221)
T 3u81_A 57 YSPSLVLELGAYCGYSAVRMARLLQPGARLLTMEINPDCAAITQQMLNFAGLQDKVTILNGASQDLIPQLKKKYDVDTLD 136 (221)
T ss_dssp HCCSEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHHHHGGGTTTTSCCCCCS
T ss_pred cCCCEEEEECCCCCHHHHHHHHhCCCCCEEEEEeCChHHHHHHHHHHHHcCCCCceEEEECCHHHHHHHHHHhcCCCceE
Confidence 36789999999999999888873 2 369999999741 12345777644 3432 27999
Q ss_pred EEEEcCceeeccCChHHHHHHHHhcccCCcEEEEE
Q 010086 171 FVFVGGARLEKASKPLDFASEIVRTLKPEGFAVVH 205 (518)
Q Consensus 171 ~V~s~~~~l~~~~dp~~~l~Ei~RVLKPGG~lvi~ 205 (518)
+|++... .++..+..+++.++ |+|||||++++.
T Consensus 137 ~V~~d~~-~~~~~~~~~~~~~~-~~LkpgG~lv~~ 169 (221)
T 3u81_A 137 MVFLDHW-KDRYLPDTLLLEKC-GLLRKGTVLLAD 169 (221)
T ss_dssp EEEECSC-GGGHHHHHHHHHHT-TCCCTTCEEEES
T ss_pred EEEEcCC-cccchHHHHHHHhc-cccCCCeEEEEe
Confidence 9999875 66665555677777 999999999885
No 186
>3tma_A Methyltransferase; thump domain; 2.05A {Thermus thermophilus}
Probab=98.81 E-value=3.4e-08 Score=101.42 Aligned_cols=104 Identities=12% Similarity=-0.016 Sum_probs=77.5
Q ss_pred HHHHHHHcCCCCCCCeEEEEcCCCCHhHHHHHhcC--CCcEEEEecCCC---------------CCcEEeccCCCCCCCC
Q 010086 104 VFQDLISEGYLSQSAKSLCVETQYGQDVFALKEIG--VEDSIGIFKKSS---------------KPLVISGEGHRIPFDG 166 (518)
Q Consensus 104 l~~~L~~~gll~~~~rvLDVGcGtG~~~~~L~~~g--~~~v~gID~s~~---------------~~l~~~~da~~LPf~D 166 (518)
+...++.....+++.++||+|||+|..+..++..+ ...++|+|+++. ...+.++|+.++|+++
T Consensus 191 la~~l~~~~~~~~~~~vLD~gcGsG~~~ie~a~~~~~~~~v~g~Di~~~~i~~a~~n~~~~g~~~i~~~~~D~~~~~~~~ 270 (354)
T 3tma_A 191 LAQALLRLADARPGMRVLDPFTGSGTIALEAASTLGPTSPVYAGDLDEKRLGLAREAALASGLSWIRFLRADARHLPRFF 270 (354)
T ss_dssp HHHHHHHHTTCCTTCCEEESSCTTSHHHHHHHHHHCTTSCEEEEESCHHHHHHHHHHHHHTTCTTCEEEECCGGGGGGTC
T ss_pred HHHHHHHHhCCCCCCEEEeCCCCcCHHHHHHHHhhCCCceEEEEECCHHHHHHHHHHHHHcCCCceEEEeCChhhCcccc
Confidence 33334444456788999999999999997777642 368999999741 2346789999999988
Q ss_pred CceeEEEEcCceeec-cC-------ChHHHHHHHHhcccCCcEEEEEecC
Q 010086 167 NTFDFVFVGGARLEK-AS-------KPLDFASEIVRTLKPEGFAVVHVRA 208 (518)
Q Consensus 167 ~SFD~V~s~~~~l~~-~~-------dp~~~l~Ei~RVLKPGG~lvi~~~~ 208 (518)
++||+|++.-- +.. .. ....+++++.|+|||||.+++.+..
T Consensus 271 ~~~D~Ii~npP-yg~r~~~~~~~~~~~~~~~~~~~~~LkpgG~l~i~t~~ 319 (354)
T 3tma_A 271 PEVDRILANPP-HGLRLGRKEGLFHLYWDFLRGALALLPPGGRVALLTLR 319 (354)
T ss_dssp CCCSEEEECCC-SCC----CHHHHHHHHHHHHHHHHTSCTTCEEEEEESC
T ss_pred CCCCEEEECCC-CcCccCCcccHHHHHHHHHHHHHHhcCCCcEEEEEeCC
Confidence 89999999642 211 11 1256889999999999999998764
No 187
>3ntv_A MW1564 protein; rossmann fold, putative methyltransferase, transferase; HET: MSE; 1.55A {Staphylococcus aureus}
Probab=98.80 E-value=4.9e-09 Score=101.19 Aligned_cols=87 Identities=16% Similarity=0.283 Sum_probs=68.2
Q ss_pred CCCCeEEEEcCCCCHhHHHHHhcC-CCcEEEEecCCC----------------CCcEEeccCCCC-C-CCCCceeEEEEc
Q 010086 115 SQSAKSLCVETQYGQDVFALKEIG-VEDSIGIFKKSS----------------KPLVISGEGHRI-P-FDGNTFDFVFVG 175 (518)
Q Consensus 115 ~~~~rvLDVGcGtG~~~~~L~~~g-~~~v~gID~s~~----------------~~l~~~~da~~L-P-f~D~SFD~V~s~ 175 (518)
.++.+|||||||+|..+..+++.. ..+++|+|+++. ...++.+|+.+. | ..+++||+|++.
T Consensus 70 ~~~~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~fD~V~~~ 149 (232)
T 3ntv_A 70 NNVKNILEIGTAIGYSSMQFASISDDIHVTTIERNETMIQYAKQNLATYHFENQVRIIEGNALEQFENVNDKVYDMIFID 149 (232)
T ss_dssp HTCCEEEEECCSSSHHHHHHHTTCTTCEEEEEECCHHHHHHHHHHHHHTTCTTTEEEEESCGGGCHHHHTTSCEEEEEEE
T ss_pred cCCCEEEEEeCchhHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECCHHHHHHhhccCCccEEEEc
Confidence 367899999999999998888732 479999999741 123567888663 5 558999999986
Q ss_pred CceeeccCChHHHHHHHHhcccCCcEEEEE
Q 010086 176 GARLEKASKPLDFASEIVRTLKPEGFAVVH 205 (518)
Q Consensus 176 ~~~l~~~~dp~~~l~Ei~RVLKPGG~lvi~ 205 (518)
.. ..+...+++++.|+|||||++++.
T Consensus 150 ~~----~~~~~~~l~~~~~~LkpgG~lv~d 175 (232)
T 3ntv_A 150 AA----KAQSKKFFEIYTPLLKHQGLVITD 175 (232)
T ss_dssp TT----SSSHHHHHHHHGGGEEEEEEEEEE
T ss_pred Cc----HHHHHHHHHHHHHhcCCCeEEEEe
Confidence 53 334667899999999999999884
No 188
>3bwc_A Spermidine synthase; SAM, SGPP, structura genomics, PSI, protein structure initiative, structural GEN pathogenic protozoa consortium; HET: MSE SAM; 2.30A {Trypanosoma cruzi} PDB: 3bwb_A*
Probab=98.79 E-value=9.4e-09 Score=103.97 Aligned_cols=93 Identities=18% Similarity=0.225 Sum_probs=68.6
Q ss_pred CCCCCeEEEEcCCCCHhHHHHHhc-CCCcEEEEecCCC-------------------CCcEEeccCCCCCC--CCCceeE
Q 010086 114 LSQSAKSLCVETQYGQDVFALKEI-GVEDSIGIFKKSS-------------------KPLVISGEGHRIPF--DGNTFDF 171 (518)
Q Consensus 114 l~~~~rvLDVGcGtG~~~~~L~~~-g~~~v~gID~s~~-------------------~~l~~~~da~~LPf--~D~SFD~ 171 (518)
.+++.+|||||||+|..+..+.+. +..+++++|+++. ...++.+|+.+.+. ++++||+
T Consensus 93 ~~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~a~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~fDv 172 (304)
T 3bwc_A 93 HPKPERVLIIGGGDGGVLREVLRHGTVEHCDLVDIDGEVMEQSKQHFPQISRSLADPRATVRVGDGLAFVRQTPDNTYDV 172 (304)
T ss_dssp SSSCCEEEEEECTTSHHHHHHHTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHHHSSCTTCEEE
T ss_pred CCCCCeEEEEcCCCCHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHhHHhhcccCCCcEEEEECcHHHHHHhccCCceeE
Confidence 356789999999999999888765 3579999999731 11245778777654 5899999
Q ss_pred EEEcCceeeccCCh----HHHHHHHHhcccCCcEEEEEec
Q 010086 172 VFVGGARLEKASKP----LDFASEIVRTLKPEGFAVVHVR 207 (518)
Q Consensus 172 V~s~~~~l~~~~dp----~~~l~Ei~RVLKPGG~lvi~~~ 207 (518)
|++... .++.+.. ..+++++.|+|||||++++...
T Consensus 173 Ii~d~~-~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~ 211 (304)
T 3bwc_A 173 VIIDTT-DPAGPASKLFGEAFYKDVLRILKPDGICCNQGE 211 (304)
T ss_dssp EEEECC----------CCHHHHHHHHHHEEEEEEEEEEEC
T ss_pred EEECCC-CccccchhhhHHHHHHHHHHhcCCCcEEEEecC
Confidence 999663 3332222 5789999999999999999864
No 189
>4hc4_A Protein arginine N-methyltransferase 6; HRMT1L6, S-adenosyl-L-homocysteine, struc genomics, structural genomics consortium, SGC; HET: SAH; 1.97A {Homo sapiens}
Probab=98.78 E-value=1.3e-08 Score=106.33 Aligned_cols=88 Identities=14% Similarity=0.080 Sum_probs=68.9
Q ss_pred CCCeEEEEcCCCCHhHHHHHhcCCCcEEEEecCCC---------------CCcEEeccCCCCCCCCCceeEEEEcC--ce
Q 010086 116 QSAKSLCVETQYGQDVFALKEIGVEDSIGIFKKSS---------------KPLVISGEGHRIPFDGNTFDFVFVGG--AR 178 (518)
Q Consensus 116 ~~~rvLDVGcGtG~~~~~L~~~g~~~v~gID~s~~---------------~~l~~~~da~~LPf~D~SFD~V~s~~--~~ 178 (518)
+|..|||||||+|.++...++.|..+|+|||.++. ...++.++.+++.+| +.||+|+|-. ..
T Consensus 83 ~~k~VLDvG~GtGiLs~~Aa~aGA~~V~ave~s~~~~~a~~~~~~n~~~~~i~~i~~~~~~~~lp-e~~DvivsE~~~~~ 161 (376)
T 4hc4_A 83 RGKTVLDVGAGTGILSIFCAQAGARRVYAVEASAIWQQAREVVRFNGLEDRVHVLPGPVETVELP-EQVDAIVSEWMGYG 161 (376)
T ss_dssp TTCEEEEETCTTSHHHHHHHHTTCSEEEEEECSTTHHHHHHHHHHTTCTTTEEEEESCTTTCCCS-SCEEEEECCCCBTT
T ss_pred CCCEEEEeCCCccHHHHHHHHhCCCEEEEEeChHHHHHHHHHHHHcCCCceEEEEeeeeeeecCC-ccccEEEeeccccc
Confidence 67899999999999998888888789999998741 123568999999887 6799999843 11
Q ss_pred eeccCChHHHHHHHHhcccCCcEEEE
Q 010086 179 LEKASKPLDFASEIVRTLKPEGFAVV 204 (518)
Q Consensus 179 l~~~~dp~~~l~Ei~RVLKPGG~lvi 204 (518)
+.+-.....++....|.|||||+++-
T Consensus 162 l~~e~~l~~~l~a~~r~Lkp~G~~iP 187 (376)
T 4hc4_A 162 LLHESMLSSVLHARTKWLKEGGLLLP 187 (376)
T ss_dssp BTTTCSHHHHHHHHHHHEEEEEEEES
T ss_pred ccccchhhhHHHHHHhhCCCCceECC
Confidence 44434566788888999999998653
No 190
>3tfw_A Putative O-methyltransferase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Klebsiella pneumoniae subsp}
Probab=98.76 E-value=1e-08 Score=100.14 Aligned_cols=87 Identities=11% Similarity=0.150 Sum_probs=66.4
Q ss_pred CCCCeEEEEcCCCCHhHHHHHhc-C-CCcEEEEecCCC----------------CCcEEeccCCC-CCCC--CCceeEEE
Q 010086 115 SQSAKSLCVETQYGQDVFALKEI-G-VEDSIGIFKKSS----------------KPLVISGEGHR-IPFD--GNTFDFVF 173 (518)
Q Consensus 115 ~~~~rvLDVGcGtG~~~~~L~~~-g-~~~v~gID~s~~----------------~~l~~~~da~~-LPf~--D~SFD~V~ 173 (518)
.++.+|||||||+|..+..+++. + ..+++|+|+++. ...++.+|+.+ +|.. +++||+|+
T Consensus 62 ~~~~~VLdiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~l~~~~~~~~fD~V~ 141 (248)
T 3tfw_A 62 TQAKRILEIGTLGGYSTIWMARELPADGQLLTLEADAHHAQVARENLQLAGVDQRVTLREGPALQSLESLGECPAFDLIF 141 (248)
T ss_dssp HTCSEEEEECCTTSHHHHHHHTTSCTTCEEEEEECCHHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHTCCSCCCCSEEE
T ss_pred cCCCEEEEecCCchHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHhcCCCCCeEEEE
Confidence 46789999999999999888874 2 379999999741 12346777765 4543 35999999
Q ss_pred EcCceeeccCChHHHHHHHHhcccCCcEEEEE
Q 010086 174 VGGARLEKASKPLDFASEIVRTLKPEGFAVVH 205 (518)
Q Consensus 174 s~~~~l~~~~dp~~~l~Ei~RVLKPGG~lvi~ 205 (518)
+... ..+...+++++.|+|||||++++.
T Consensus 142 ~d~~----~~~~~~~l~~~~~~LkpGG~lv~~ 169 (248)
T 3tfw_A 142 IDAD----KPNNPHYLRWALRYSRPGTLIIGD 169 (248)
T ss_dssp ECSC----GGGHHHHHHHHHHTCCTTCEEEEE
T ss_pred ECCc----hHHHHHHHHHHHHhcCCCeEEEEe
Confidence 8653 234567899999999999999886
No 191
>1zg3_A Isoflavanone 4'-O-methyltransferase; rossman fold, plant Pro transferase; HET: 2HI SAH; 2.35A {Medicago truncatula} PDB: 1zga_A* 1zhf_A* 1zgj_A*
Probab=98.75 E-value=1.8e-08 Score=103.37 Aligned_cols=88 Identities=10% Similarity=0.049 Sum_probs=71.1
Q ss_pred CCCCCeEEEEcCCCCHhHHHHHhcC-CCcEEEEecCC-------CC-CcEEeccCCCCCCCCCceeEEEEcCceeeccCC
Q 010086 114 LSQSAKSLCVETQYGQDVFALKEIG-VEDSIGIFKKS-------SK-PLVISGEGHRIPFDGNTFDFVFVGGARLEKASK 184 (518)
Q Consensus 114 l~~~~rvLDVGcGtG~~~~~L~~~g-~~~v~gID~s~-------~~-~l~~~~da~~LPf~D~SFD~V~s~~~~l~~~~d 184 (518)
++++.+|||||||+|..+..+.+.. ..+++++|++. .+ ..++.+|..+ |++ +||+|++..+ |||+++
T Consensus 191 ~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~~~~~~~a~~~~~v~~~~~d~~~-~~~--~~D~v~~~~v-lh~~~d 266 (358)
T 1zg3_A 191 FEGLESLVDVGGGTGGVTKLIHEIFPHLKCTVFDQPQVVGNLTGNENLNFVGGDMFK-SIP--SADAVLLKWV-LHDWND 266 (358)
T ss_dssp HHTCSEEEEETCTTSHHHHHHHHHCTTSEEEEEECHHHHSSCCCCSSEEEEECCTTT-CCC--CCSEEEEESC-GGGSCH
T ss_pred ccCCCEEEEECCCcCHHHHHHHHHCCCCeEEEeccHHHHhhcccCCCcEEEeCccCC-CCC--CceEEEEccc-ccCCCH
Confidence 3466899999999999998887753 35899999741 01 2245778877 777 3999999998 999998
Q ss_pred hH--HHHHHHHhcccC---CcEEEEE
Q 010086 185 PL--DFASEIVRTLKP---EGFAVVH 205 (518)
Q Consensus 185 p~--~~l~Ei~RVLKP---GG~lvi~ 205 (518)
+. ++++++.|+||| ||++++.
T Consensus 267 ~~~~~~l~~~~~~L~p~~~gG~l~i~ 292 (358)
T 1zg3_A 267 EQSLKILKNSKEAISHKGKDGKVIII 292 (358)
T ss_dssp HHHHHHHHHHHHHTGGGGGGCEEEEE
T ss_pred HHHHHHHHHHHHhCCCCCCCcEEEEE
Confidence 87 899999999999 9998875
No 192
>1ne2_A Hypothetical protein TA1320; structural genomics, conserved hypothetical protein, PSI, protein structure initiative; 1.75A {Thermoplasma acidophilum} SCOP: c.66.1.32
Probab=98.73 E-value=3.7e-08 Score=92.08 Aligned_cols=85 Identities=11% Similarity=0.021 Sum_probs=63.6
Q ss_pred CCCCCeEEEEcCCCCHhHHHHHhcCCCcEEEEecCCC----------CCcEEeccCCCCCCCCCceeEEEEcCceeeccC
Q 010086 114 LSQSAKSLCVETQYGQDVFALKEIGVEDSIGIFKKSS----------KPLVISGEGHRIPFDGNTFDFVFVGGARLEKAS 183 (518)
Q Consensus 114 l~~~~rvLDVGcGtG~~~~~L~~~g~~~v~gID~s~~----------~~l~~~~da~~LPf~D~SFD~V~s~~~~l~~~~ 183 (518)
..++.+|||+|||+|..+..+++.|...++|+|+++. ...++++|+.++| ++||+|++... ++|..
T Consensus 49 ~~~~~~vlD~gcG~G~~~~~l~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~d~~~~~---~~~D~v~~~~p-~~~~~ 124 (200)
T 1ne2_A 49 NIGGRSVIDAGTGNGILACGSYLLGAESVTAFDIDPDAIETAKRNCGGVNFMVADVSEIS---GKYDTWIMNPP-FGSVV 124 (200)
T ss_dssp SSBTSEEEEETCTTCHHHHHHHHTTBSEEEEEESCHHHHHHHHHHCTTSEEEECCGGGCC---CCEEEEEECCC-C----
T ss_pred CCCCCEEEEEeCCccHHHHHHHHcCCCEEEEEECCHHHHHHHHHhcCCCEEEECcHHHCC---CCeeEEEECCC-chhcc
Confidence 3577899999999999998888777567999999741 2446788988876 79999999886 77775
Q ss_pred C--hHHHHHHHHhcccCCcEEEE
Q 010086 184 K--PLDFASEIVRTLKPEGFAVV 204 (518)
Q Consensus 184 d--p~~~l~Ei~RVLKPGG~lvi 204 (518)
+ ..++++++.|+| |+++++
T Consensus 125 ~~~~~~~l~~~~~~~--g~~~~~ 145 (200)
T 1ne2_A 125 KHSDRAFIDKAFETS--MWIYSI 145 (200)
T ss_dssp ---CHHHHHHHHHHE--EEEEEE
T ss_pred CchhHHHHHHHHHhc--CcEEEE
Confidence 4 246899999999 554443
No 193
>3adn_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, polyamine biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli} PDB: 3o4f_A
Probab=98.73 E-value=3.3e-08 Score=99.90 Aligned_cols=91 Identities=15% Similarity=0.188 Sum_probs=66.3
Q ss_pred CCCCeEEEEcCCCCHhHHHHHhc-CCCcEEEEecCCC--------------------CCcEEeccCCC-CCCCCCceeEE
Q 010086 115 SQSAKSLCVETQYGQDVFALKEI-GVEDSIGIFKKSS--------------------KPLVISGEGHR-IPFDGNTFDFV 172 (518)
Q Consensus 115 ~~~~rvLDVGcGtG~~~~~L~~~-g~~~v~gID~s~~--------------------~~l~~~~da~~-LPf~D~SFD~V 172 (518)
++..+|||||||+|..+..+.+. +..+|+++|+++. ...++.+|+.+ ++..+++||+|
T Consensus 82 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~V~~VDid~~vi~~ar~~~~~~~~~~~~~~rv~~~~~D~~~~l~~~~~~fDvI 161 (294)
T 3adn_A 82 GHAKHVLIIGGGDGAMLREVTRHKNVESITMVEIDAGVVSFCRQYLPNHNAGSYDDPRFKLVIDDGVNFVNQTSQTFDVI 161 (294)
T ss_dssp TTCCEEEEESCTTCHHHHHHHTCTTCCEEEEECSCTTHHHHHHHHCHHHHSSCTTCTTCCEECSCSCC---CCCCCEEEE
T ss_pred CCCCEEEEEeCChhHHHHHHHhCCCCCEEEEEECCHHHHHHHHHhhhhcccccccCCceEEEEChHHHHHhhcCCCccEE
Confidence 45689999999999999888775 4578999999751 12355778765 35568899999
Q ss_pred EEcCceeeccCCh-----HHHHHHHHhcccCCcEEEEEec
Q 010086 173 FVGGARLEKASKP-----LDFASEIVRTLKPEGFAVVHVR 207 (518)
Q Consensus 173 ~s~~~~l~~~~dp-----~~~l~Ei~RVLKPGG~lvi~~~ 207 (518)
++... +....+ ..+++++.|+|||||++++...
T Consensus 162 i~D~~--~p~~~~~~l~~~~f~~~~~~~LkpgG~lv~~~~ 199 (294)
T 3adn_A 162 ISDCT--DPIGPGESLFTSAFYEGCKRCLNPGGIFVAQNG 199 (294)
T ss_dssp EECC------------CCHHHHHHHHHTEEEEEEEEEEEE
T ss_pred EECCC--CccCcchhccHHHHHHHHHHhcCCCCEEEEecC
Confidence 99652 222111 5789999999999999999864
No 194
>3fzg_A 16S rRNA methylase; methyltransferase, plasmid, transferase; HET: SAM; 2.00A {Escherichia coli}
Probab=98.72 E-value=5.1e-09 Score=99.96 Aligned_cols=91 Identities=8% Similarity=-0.050 Sum_probs=69.9
Q ss_pred CCCCCeEEEEcCCCCHhHHHHHhc-CCCcEEEEecCCC-------------CC-cEEeccCCCCCCCCCceeEEEEcCce
Q 010086 114 LSQSAKSLCVETQYGQDVFALKEI-GVEDSIGIFKKSS-------------KP-LVISGEGHRIPFDGNTFDFVFVGGAR 178 (518)
Q Consensus 114 l~~~~rvLDVGcGtG~~~~~L~~~-g~~~v~gID~s~~-------------~~-l~~~~da~~LPf~D~SFD~V~s~~~~ 178 (518)
+.+.++|||+|||+|..+..+... +..+++|+|+++. .. .+..+|... ..+.++||+|++...
T Consensus 47 l~~~~~VLDlGCG~GplAl~l~~~~p~a~~~A~Di~~~~leiar~~~~~~g~~~~v~~~d~~~-~~~~~~~DvVLa~k~- 124 (200)
T 3fzg_A 47 IKHVSSILDFGCGFNPLALYQWNENEKIIYHAYDIDRAEIAFLSSIIGKLKTTIKYRFLNKES-DVYKGTYDVVFLLKM- 124 (200)
T ss_dssp SCCCSEEEEETCTTHHHHHHHHCSSCCCEEEEECSCHHHHHHHHHHHHHSCCSSEEEEECCHH-HHTTSEEEEEEEETC-
T ss_pred cCCCCeEEEecCCCCHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHHhcCCCccEEEecccc-cCCCCCcChhhHhhH-
Confidence 467889999999999999888654 2359999999841 11 233344433 256789999999998
Q ss_pred eeccCChHHHHHHHHhcccCCcEEEEEe
Q 010086 179 LEKASKPLDFASEIVRTLKPEGFAVVHV 206 (518)
Q Consensus 179 l~~~~dp~~~l~Ei~RVLKPGG~lvi~~ 206 (518)
+|++.+...++..+.+.|||||+++-.-
T Consensus 125 LHlL~~~~~al~~v~~~L~pggvfISfp 152 (200)
T 3fzg_A 125 LPVLKQQDVNILDFLQLFHTQNFVISFP 152 (200)
T ss_dssp HHHHHHTTCCHHHHHHTCEEEEEEEEEE
T ss_pred HHhhhhhHHHHHHHHHHhCCCCEEEEeC
Confidence 9999666677889999999999987653
No 195
>2gpy_A O-methyltransferase; structural genomics, PSI, protein structure initiative, NEW research center for structural genomics, nysgxrc; HET: MSE; 1.90A {Bacillus halodurans}
Probab=98.72 E-value=1.1e-08 Score=98.23 Aligned_cols=87 Identities=15% Similarity=0.227 Sum_probs=68.0
Q ss_pred CCCCeEEEEcCCCCHhHHHHHhc-CCCcEEEEecCCC----------------CCcEEeccCCCC-CCC--CCceeEEEE
Q 010086 115 SQSAKSLCVETQYGQDVFALKEI-GVEDSIGIFKKSS----------------KPLVISGEGHRI-PFD--GNTFDFVFV 174 (518)
Q Consensus 115 ~~~~rvLDVGcGtG~~~~~L~~~-g~~~v~gID~s~~----------------~~l~~~~da~~L-Pf~--D~SFD~V~s 174 (518)
.++.+|||||||+|..+..+++. +..+++++|+++. ...++.+|+.+. |.. +++||+|++
T Consensus 53 ~~~~~vLdiG~G~G~~~~~la~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~fD~I~~ 132 (233)
T 2gpy_A 53 AAPARILEIGTAIGYSAIRMAQALPEATIVSIERDERRYEEAHKHVKALGLESRIELLFGDALQLGEKLELYPLFDVLFI 132 (233)
T ss_dssp HCCSEEEEECCTTSHHHHHHHHHCTTCEEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCGGGSHHHHTTSCCEEEEEE
T ss_pred cCCCEEEEecCCCcHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECCHHHHHHhcccCCCccEEEE
Confidence 46789999999999999888775 2369999999741 123456777663 544 689999999
Q ss_pred cCceeeccCChHHHHHHHHhcccCCcEEEEE
Q 010086 175 GGARLEKASKPLDFASEIVRTLKPEGFAVVH 205 (518)
Q Consensus 175 ~~~~l~~~~dp~~~l~Ei~RVLKPGG~lvi~ 205 (518)
... . .+...+++++.|+|||||++++.
T Consensus 133 ~~~-~---~~~~~~l~~~~~~L~pgG~lv~~ 159 (233)
T 2gpy_A 133 DAA-K---GQYRRFFDMYSPMVRPGGLILSD 159 (233)
T ss_dssp EGG-G---SCHHHHHHHHGGGEEEEEEEEEE
T ss_pred CCC-H---HHHHHHHHHHHHHcCCCeEEEEE
Confidence 764 3 35778999999999999999886
No 196
>1ixk_A Methyltransferase; open beta sheet; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.38
Probab=98.71 E-value=1.4e-08 Score=103.11 Aligned_cols=93 Identities=12% Similarity=0.117 Sum_probs=68.9
Q ss_pred CCCCCeEEEEcCCCCHhHHHHHhc--CCCcEEEEecCCC---------------CCcEEeccCCCCCCCCCceeEEEEcC
Q 010086 114 LSQSAKSLCVETQYGQDVFALKEI--GVEDSIGIFKKSS---------------KPLVISGEGHRIPFDGNTFDFVFVGG 176 (518)
Q Consensus 114 l~~~~rvLDVGcGtG~~~~~L~~~--g~~~v~gID~s~~---------------~~l~~~~da~~LPf~D~SFD~V~s~~ 176 (518)
++++.+|||+|||+|..+..+++. +...|+|+|+++. ...++.+|+..++..+++||.|++..
T Consensus 116 ~~~g~~VLDlg~G~G~~t~~la~~~~~~~~v~avD~s~~~l~~a~~~~~~~g~~~v~~~~~D~~~~~~~~~~fD~Il~d~ 195 (315)
T 1ixk_A 116 PKPGEIVADMAAAPGGKTSYLAQLMRNDGVIYAFDVDENRLRETRLNLSRLGVLNVILFHSSSLHIGELNVEFDKILLDA 195 (315)
T ss_dssp CCTTCEEEECCSSCSHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHHTCCSEEEESSCGGGGGGGCCCEEEEEEEC
T ss_pred CCCCCEEEEeCCCCCHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHHHHhCCCeEEEEECChhhcccccccCCEEEEeC
Confidence 578899999999999999888764 2368999999841 12356788888876678999999831
Q ss_pred -----ceeeccCC----------------hHHHHHHHHhcccCCcEEEEEe
Q 010086 177 -----ARLEKASK----------------PLDFASEIVRTLKPEGFAVVHV 206 (518)
Q Consensus 177 -----~~l~~~~d----------------p~~~l~Ei~RVLKPGG~lvi~~ 206 (518)
..+++.++ ..++++++.|+|||||++++.+
T Consensus 196 Pcsg~g~~~~~p~~~~~~~~~~~~~~~~~q~~~L~~~~~~LkpGG~lv~st 246 (315)
T 1ixk_A 196 PCTGSGTIHKNPERKWNRTMDDIKFCQGLQMRLLEKGLEVLKPGGILVYST 246 (315)
T ss_dssp CTTSTTTCC--------CCHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred CCCCcccccCChhHhhcCCHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEEe
Confidence 11433221 1478899999999999998864
No 197
>3c3p_A Methyltransferase; NP_951602.1, structural genomics, joint for structural genomics, JCSG, protein structure initiative transferase; 1.90A {Geobacter sulfurreducens pca}
Probab=98.71 E-value=1.2e-08 Score=96.29 Aligned_cols=85 Identities=12% Similarity=0.112 Sum_probs=65.9
Q ss_pred CCCeEEEEcCCCCHhHHHHHhc-C-CCcEEEEecCCC----------------CCcEEeccCCCC-CCCCCceeEEEEcC
Q 010086 116 QSAKSLCVETQYGQDVFALKEI-G-VEDSIGIFKKSS----------------KPLVISGEGHRI-PFDGNTFDFVFVGG 176 (518)
Q Consensus 116 ~~~rvLDVGcGtG~~~~~L~~~-g-~~~v~gID~s~~----------------~~l~~~~da~~L-Pf~D~SFD~V~s~~ 176 (518)
++.+|||||||+|..+..+++. + ..+++++|+++. ...++.+|+.+. |..++ ||+|++..
T Consensus 56 ~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~-fD~v~~~~ 134 (210)
T 3c3p_A 56 QPQLVVVPGDGLGCASWWFARAISISSRVVMIDPDRDNVEHARRMLHDNGLIDRVELQVGDPLGIAAGQRD-IDILFMDC 134 (210)
T ss_dssp CCSEEEEESCGGGHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHSGGGGEEEEESCHHHHHTTCCS-EEEEEEET
T ss_pred CCCEEEEEcCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHCCCCceEEEEEecHHHHhccCCC-CCEEEEcC
Confidence 5679999999999999888764 2 369999999741 122457777653 66667 99999864
Q ss_pred ceeeccCChHHHHHHHHhcccCCcEEEEE
Q 010086 177 ARLEKASKPLDFASEIVRTLKPEGFAVVH 205 (518)
Q Consensus 177 ~~l~~~~dp~~~l~Ei~RVLKPGG~lvi~ 205 (518)
. ..+...+++++.|+|||||++++.
T Consensus 135 ~----~~~~~~~l~~~~~~LkpgG~lv~~ 159 (210)
T 3c3p_A 135 D----VFNGADVLERMNRCLAKNALLIAV 159 (210)
T ss_dssp T----TSCHHHHHHHHGGGEEEEEEEEEE
T ss_pred C----hhhhHHHHHHHHHhcCCCeEEEEE
Confidence 2 245678999999999999999885
No 198
>1zq9_A Probable dimethyladenosine transferase; SGC, structural genomics, structural genomics consortium; HET: SAM; 1.90A {Homo sapiens} SCOP: c.66.1.24
Probab=98.71 E-value=9.2e-09 Score=103.11 Aligned_cols=96 Identities=17% Similarity=0.079 Sum_probs=67.3
Q ss_pred HHHHHHcCCCCCCCeEEEEcCCCCHhHHHHHhcCCCcEEEEecCCC----------------CCcEEeccCCCCCCCCCc
Q 010086 105 FQDLISEGYLSQSAKSLCVETQYGQDVFALKEIGVEDSIGIFKKSS----------------KPLVISGEGHRIPFDGNT 168 (518)
Q Consensus 105 ~~~L~~~gll~~~~rvLDVGcGtG~~~~~L~~~g~~~v~gID~s~~----------------~~l~~~~da~~LPf~D~S 168 (518)
.+.+++...+.++.+|||||||+|..+..|.+.+ .+|+|+|+++. ...++.+|+.+++++ +
T Consensus 17 ~~~i~~~~~~~~~~~VLDiG~G~G~lt~~L~~~~-~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~D~~~~~~~--~ 93 (285)
T 1zq9_A 17 INSIIDKAALRPTDVVLEVGPGTGNMTVKLLEKA-KKVVACELDPRLVAELHKRVQGTPVASKLQVLVGDVLKTDLP--F 93 (285)
T ss_dssp HHHHHHHTCCCTTCEEEEECCTTSTTHHHHHHHS-SEEEEEESCHHHHHHHHHHHTTSTTGGGEEEEESCTTTSCCC--C
T ss_pred HHHHHHhcCCCCCCEEEEEcCcccHHHHHHHhhC-CEEEEEECCHHHHHHHHHHHHhcCCCCceEEEEcceecccch--h
Confidence 3344444446788999999999999999998876 69999999741 123568999888876 7
Q ss_pred eeEEEEcCc----------eeeccCChHHHH----HHHH--hcccCCcEEE
Q 010086 169 FDFVFVGGA----------RLEKASKPLDFA----SEIV--RTLKPEGFAV 203 (518)
Q Consensus 169 FD~V~s~~~----------~l~~~~dp~~~l----~Ei~--RVLKPGG~lv 203 (518)
||.|+++.. .++|.+++..++ +|+. |+|||||.++
T Consensus 94 fD~vv~nlpy~~~~~~~~~~l~~~~~~~~~~~m~qkEva~r~vlkPGg~~y 144 (285)
T 1zq9_A 94 FDTCVANLPYQISSPFVFKLLLHRPFFRCAILMFQREFALRLVAKPGDKLY 144 (285)
T ss_dssp CSEEEEECCGGGHHHHHHHHHHCSSCCSEEEEEEEHHHHHHHHCCTTCTTC
T ss_pred hcEEEEecCcccchHHHHHHHhcCcchhhhhhhhhHHHHHHHhcCCCCccc
Confidence 999999642 023333332111 5554 7999999863
No 199
>3a27_A TYW2, uncharacterized protein MJ1557; wybutosine modification, transferase; HET: SAM; 2.00A {Methanocaldococcus jannaschii}
Probab=98.69 E-value=3.1e-08 Score=98.41 Aligned_cols=89 Identities=16% Similarity=0.144 Sum_probs=71.5
Q ss_pred CCCCCCeEEEEcCCCCHhHHHHHhcC-CCcEEEEecCCC---------------CCcEEeccCCCCCCCCCceeEEEEcC
Q 010086 113 YLSQSAKSLCVETQYGQDVFALKEIG-VEDSIGIFKKSS---------------KPLVISGEGHRIPFDGNTFDFVFVGG 176 (518)
Q Consensus 113 ll~~~~rvLDVGcGtG~~~~~L~~~g-~~~v~gID~s~~---------------~~l~~~~da~~LPf~D~SFD~V~s~~ 176 (518)
.++++.+|||+|||+|..+..+++.+ ..+|+|+|+++. ...++.+|+.++|. +++||+|++..
T Consensus 116 ~~~~~~~VLDlgcG~G~~s~~la~~~~~~~V~~vD~s~~av~~a~~n~~~n~l~~~~~~~~d~~~~~~-~~~~D~Vi~d~ 194 (272)
T 3a27_A 116 ISNENEVVVDMFAGIGYFTIPLAKYSKPKLVYAIEKNPTAYHYLCENIKLNKLNNVIPILADNRDVEL-KDVADRVIMGY 194 (272)
T ss_dssp SCCTTCEEEETTCTTTTTHHHHHHHTCCSEEEEEECCHHHHHHHHHHHHHTTCSSEEEEESCGGGCCC-TTCEEEEEECC
T ss_pred hcCCCCEEEEecCcCCHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCEEEEECChHHcCc-cCCceEEEECC
Confidence 36788999999999999998888763 459999999741 12356889888755 78999999976
Q ss_pred ceeeccCChHHHHHHHHhcccCCcEEEEEec
Q 010086 177 ARLEKASKPLDFASEIVRTLKPEGFAVVHVR 207 (518)
Q Consensus 177 ~~l~~~~dp~~~l~Ei~RVLKPGG~lvi~~~ 207 (518)
. . +...++.++.|+|||||++++...
T Consensus 195 p-~----~~~~~l~~~~~~LkpgG~l~~s~~ 220 (272)
T 3a27_A 195 V-H----KTHKFLDKTFEFLKDRGVIHYHET 220 (272)
T ss_dssp C-S----SGGGGHHHHHHHEEEEEEEEEEEE
T ss_pred c-c----cHHHHHHHHHHHcCCCCEEEEEEc
Confidence 4 2 567789999999999999988754
No 200
>1nv8_A HEMK protein; class I adoMet-dependent methyltransferase; HET: SAM MEQ; 2.20A {Thermotoga maritima} SCOP: c.66.1.30 PDB: 1nv9_A* 1vq1_A* 1sg9_A*
Probab=98.69 E-value=6e-08 Score=97.20 Aligned_cols=104 Identities=13% Similarity=0.142 Sum_probs=73.0
Q ss_pred CCCeEEEEcCCCCHhHHHHHhcCCCcEEEEecCCC----------------CCcEEeccCCCCCCCCCce---eEEEEcC
Q 010086 116 QSAKSLCVETQYGQDVFALKEIGVEDSIGIFKKSS----------------KPLVISGEGHRIPFDGNTF---DFVFVGG 176 (518)
Q Consensus 116 ~~~rvLDVGcGtG~~~~~L~~~g~~~v~gID~s~~----------------~~l~~~~da~~LPf~D~SF---D~V~s~~ 176 (518)
++.+|||+|||+|..+..+++.+..+|+|+|+|+. ...++++|..+ +++ ++| |+|+|+-
T Consensus 123 ~~~~vLDlG~GsG~~~~~la~~~~~~v~~vDis~~al~~A~~n~~~~~l~~~v~~~~~D~~~-~~~-~~f~~~D~IvsnP 200 (284)
T 1nv8_A 123 GIKTVADIGTGSGAIGVSVAKFSDAIVFATDVSSKAVEIARKNAERHGVSDRFFVRKGEFLE-PFK-EKFASIEMILSNP 200 (284)
T ss_dssp TCCEEEEESCTTSHHHHHHHHHSSCEEEEEESCHHHHHHHHHHHHHTTCTTSEEEEESSTTG-GGG-GGTTTCCEEEECC
T ss_pred CCCEEEEEeCchhHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHcCCCCceEEEECcchh-hcc-cccCCCCEEEEcC
Confidence 56799999999999998887664469999999841 12356778765 333 589 9999962
Q ss_pred cee----------ecc--------CChHHHHHHHH-hcccCCcEEEEEecCCCccCchhHhhhccCc
Q 010086 177 ARL----------EKA--------SKPLDFASEIV-RTLKPEGFAVVHVRAKDEYSFNSFLDLFNSC 224 (518)
Q Consensus 177 ~~l----------~~~--------~dp~~~l~Ei~-RVLKPGG~lvi~~~~~~~~s~~~~~~lf~~~ 224 (518)
-+. .|- .++..+++++. +.|||||++++.++.... ..+..+|...
T Consensus 201 Pyi~~~~~l~~~v~~ep~~al~~~~dgl~~~~~i~~~~l~pgG~l~~e~~~~q~---~~v~~~~~~~ 264 (284)
T 1nv8_A 201 PYVKSSAHLPKDVLFEPPEALFGGEDGLDFYREFFGRYDTSGKIVLMEIGEDQV---EELKKIVSDT 264 (284)
T ss_dssp CCBCGGGSCTTSCCCSCHHHHBCTTTSCHHHHHHHHHCCCTTCEEEEECCTTCH---HHHTTTSTTC
T ss_pred CCCCcccccChhhccCcHHHhcCCCcHHHHHHHHHHhcCCCCCEEEEEECchHH---HHHHHHHHhC
Confidence 100 021 12337899999 999999999998764332 4566666655
No 201
>3r3h_A O-methyltransferase, SAM-dependent; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.65A {Legionella pneumophila subsp}
Probab=98.68 E-value=1.2e-08 Score=99.77 Aligned_cols=86 Identities=16% Similarity=0.204 Sum_probs=65.5
Q ss_pred CCCeEEEEcCCCCHhHHHHHhc-C-CCcEEEEecCCCC----------------CcEEeccCCCC-CCC-----CCceeE
Q 010086 116 QSAKSLCVETQYGQDVFALKEI-G-VEDSIGIFKKSSK----------------PLVISGEGHRI-PFD-----GNTFDF 171 (518)
Q Consensus 116 ~~~rvLDVGcGtG~~~~~L~~~-g-~~~v~gID~s~~~----------------~l~~~~da~~L-Pf~-----D~SFD~ 171 (518)
++.+|||||||+|..+..+++. + ..+|+++|+++.. ..++.+|+.+. |.. +++||+
T Consensus 60 ~~~~VLDiG~G~G~~t~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gda~~~l~~~~~~~~~~~fD~ 139 (242)
T 3r3h_A 60 RAKKVLELGTFTGYSALAMSLALPDDGQVITCDINEGWTKHAHPYWREAKQEHKIKLRLGPALDTLHSLLNEGGEHQFDF 139 (242)
T ss_dssp TCSEEEEEESCCSHHHHHHHHTSCTTCEEEEEECCCSSCCCSHHHHHHTTCTTTEEEEESCHHHHHHHHHHHHCSSCEEE
T ss_pred CcCEEEEeeCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHhhccCCCCEeE
Confidence 5679999999999999888873 2 3699999998631 12456777554 322 689999
Q ss_pred EEEcCceeeccCChHHHHHHHHhcccCCcEEEEE
Q 010086 172 VFVGGARLEKASKPLDFASEIVRTLKPEGFAVVH 205 (518)
Q Consensus 172 V~s~~~~l~~~~dp~~~l~Ei~RVLKPGG~lvi~ 205 (518)
|++... ..+...+++++.|+|||||++++.
T Consensus 140 V~~d~~----~~~~~~~l~~~~~~LkpGG~lv~d 169 (242)
T 3r3h_A 140 IFIDAD----KTNYLNYYELALKLVTPKGLIAID 169 (242)
T ss_dssp EEEESC----GGGHHHHHHHHHHHEEEEEEEEEE
T ss_pred EEEcCC----hHHhHHHHHHHHHhcCCCeEEEEE
Confidence 998653 234567899999999999999985
No 202
>3evf_A RNA-directed RNA polymerase NS5; NS5 methyltransferase, RNA CAP binding, binding, capsid protein; HET: GTA SAH; 1.45A {Yellow fever virus} SCOP: c.66.1.0 PDB: 3evb_A* 3evc_A* 3evd_A* 3eve_A* 3eva_A*
Probab=98.68 E-value=7.5e-08 Score=96.29 Aligned_cols=125 Identities=12% Similarity=0.045 Sum_probs=85.7
Q ss_pred hhhhhhhccCCCcchhhccCChhHHHHHhhHHHHHHHHHHcCCCCCCCeEEEEcCCCCHhHHHHHh-cCCCcEEEEecCC
Q 010086 71 TANKAVRSNIVSPSRRDMYTSKEWIKAVNFYSSVFQDLISEGYLSQSAKSLCVETQYGQDVFALKE-IGVEDSIGIFKKS 149 (518)
Q Consensus 71 ~a~r~~~~~~~~~~~~~~w~s~~wr~~v~~~~~l~~~L~~~gll~~~~rvLDVGcGtG~~~~~L~~-~g~~~v~gID~s~ 149 (518)
.|.++++. +...-..|+|+.+.|-. ++.+..+++++.+|||+|||+|..++..++ .+...++|+|+..
T Consensus 40 ~ar~~l~~---~~~~~~~YrSRaA~KL~--------ei~ek~~l~~~~~VLDLGaAPGGWSQvAa~~~~~~~v~g~dVGv 108 (277)
T 3evf_A 40 TARRHLAE---GKVDTGVAVSRGTAKLR--------WFHERGYVKLEGRVIDLGCGRGGWCYYAAAQKEVSGVKGFTLGR 108 (277)
T ss_dssp HHHHHHHT---TCCSSCBCSSTHHHHHH--------HHHHTTSSCCCEEEEEETCTTCHHHHHHHTSTTEEEEEEECCCC
T ss_pred HHHHHHhc---CCccCCCccccHHHHHH--------HHHHhCCCCCCCEEEEecCCCCHHHHHHHHhcCCCcceeEEEec
Confidence 35666663 33344568888777732 233446789999999999999999986654 3556778888762
Q ss_pred C----CC---------cEEeccCCCCCCCCCceeEEEEcCceeeccCCh----H---HHHHHHHhcccCC-cEEEEEecC
Q 010086 150 S----KP---------LVISGEGHRIPFDGNTFDFVFVGGARLEKASKP----L---DFASEIVRTLKPE-GFAVVHVRA 208 (518)
Q Consensus 150 ~----~~---------l~~~~da~~LPf~D~SFD~V~s~~~~l~~~~dp----~---~~l~Ei~RVLKPG-G~lvi~~~~ 208 (518)
. +. ...+++.+..+++++.||+|+|..+ .+ .-.+ . ..++.+.++|||| |.+++-+-+
T Consensus 109 Dl~~~pi~~~~~g~~ii~~~~~~dv~~l~~~~~DlVlsD~a-pn-sG~~~~D~~rs~~LL~~a~~~LkpG~G~FV~KVf~ 186 (277)
T 3evf_A 109 DGHEKPMNVQSLGWNIITFKDKTDIHRLEPVKCDTLLCDIG-ES-SSSSVTEGERTVRVLDTVEKWLACGVDNFCVKVLA 186 (277)
T ss_dssp TTCCCCCCCCBTTGGGEEEECSCCTTTSCCCCCSEEEECCC-CC-CSCHHHHHHHHHHHHHHHHHHHTTCCSEEEEEESC
T ss_pred cCcccccccCcCCCCeEEEeccceehhcCCCCccEEEecCc-cC-cCchHHHHHHHHHHHHHHHHHhCCCCCeEEEEecC
Confidence 1 11 1134555667888999999999774 44 2222 1 2468889999999 999997654
No 203
>3tr6_A O-methyltransferase; cellular processes; HET: SAH; 2.70A {Coxiella burnetii} SCOP: c.66.1.0
Probab=98.66 E-value=1.2e-08 Score=96.79 Aligned_cols=87 Identities=14% Similarity=0.092 Sum_probs=65.2
Q ss_pred CCCCeEEEEcCCCCHhHHHHHhc-C-CCcEEEEecCCC----------------CCcEEeccCCCC-CC-CC----Ccee
Q 010086 115 SQSAKSLCVETQYGQDVFALKEI-G-VEDSIGIFKKSS----------------KPLVISGEGHRI-PF-DG----NTFD 170 (518)
Q Consensus 115 ~~~~rvLDVGcGtG~~~~~L~~~-g-~~~v~gID~s~~----------------~~l~~~~da~~L-Pf-~D----~SFD 170 (518)
.++.+|||||||+|..+..+++. + ..+++++|+++. ...++.+|+.+. |. ++ ++||
T Consensus 63 ~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~fD 142 (225)
T 3tr6_A 63 MQAKKVIDIGTFTGYSAIAMGLALPKDGTLITCDVDEKSTALAKEYWEKAGLSDKIGLRLSPAKDTLAELIHAGQAWQYD 142 (225)
T ss_dssp HTCSEEEEECCTTSHHHHHHHTTCCTTCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHHHHTTTCTTCEE
T ss_pred hCCCEEEEeCCcchHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHHCCCCCceEEEeCCHHHHHHHhhhccCCCCcc
Confidence 36789999999999999888874 2 479999999741 123456776432 32 22 8999
Q ss_pred EEEEcCceeeccCChHHHHHHHHhcccCCcEEEEE
Q 010086 171 FVFVGGARLEKASKPLDFASEIVRTLKPEGFAVVH 205 (518)
Q Consensus 171 ~V~s~~~~l~~~~dp~~~l~Ei~RVLKPGG~lvi~ 205 (518)
+|++... ..+...+++++.|+|||||++++.
T Consensus 143 ~v~~~~~----~~~~~~~l~~~~~~L~pgG~lv~~ 173 (225)
T 3tr6_A 143 LIYIDAD----KANTDLYYEESLKLLREGGLIAVD 173 (225)
T ss_dssp EEEECSC----GGGHHHHHHHHHHHEEEEEEEEEE
T ss_pred EEEECCC----HHHHHHHHHHHHHhcCCCcEEEEe
Confidence 9997553 234678899999999999999985
No 204
>3giw_A Protein of unknown function DUF574; rossmann-fold protein, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 1.45A {Streptomyces avermitilis} PDB: 3go4_A*
Probab=98.66 E-value=4.7e-08 Score=98.15 Aligned_cols=105 Identities=8% Similarity=0.082 Sum_probs=71.5
Q ss_pred hhHHHHHHHHHHcCCCCCCCeEEEEcCCC--CHhHHHH-Hh-cCCCcEEEEecCCC------------C---CcEEeccC
Q 010086 99 NFYSSVFQDLISEGYLSQSAKSLCVETQY--GQDVFAL-KE-IGVEDSIGIFKKSS------------K---PLVISGEG 159 (518)
Q Consensus 99 ~~~~~l~~~L~~~gll~~~~rvLDVGcGt--G~~~~~L-~~-~g~~~v~gID~s~~------------~---~l~~~~da 159 (518)
.|+....+.|..+. ...++||||||+ +..+..+ .+ ....+|+++|.|+. + ..++++|.
T Consensus 64 ~fl~rav~~l~~~~---g~~q~LDLGcG~pT~~~~~~la~~~~P~arVv~VD~sp~mLa~Ar~~l~~~~~~~~~~v~aD~ 140 (277)
T 3giw_A 64 DWMNRAVAHLAKEA---GIRQFLDIGTGIPTSPNLHEIAQSVAPESRVVYVDNDPIVLTLSQGLLASTPEGRTAYVEADM 140 (277)
T ss_dssp HHHHHHHHHHHHTS---CCCEEEEESCCSCCSSCHHHHHHHHCTTCEEEEEECCHHHHHTTHHHHCCCSSSEEEEEECCT
T ss_pred HHHHHHHHHhcccc---CCCEEEEeCCCCCcccHHHHHHHHHCCCCEEEEEeCChHHHHHHHHHhccCCCCcEEEEEecc
Confidence 45555555555321 126899999997 3333333 32 23469999999741 1 23568888
Q ss_pred CCCC------CCCCcee-----EEEEcCceeeccCC---hHHHHHHHHhcccCCcEEEEEec
Q 010086 160 HRIP------FDGNTFD-----FVFVGGARLEKASK---PLDFASEIVRTLKPEGFAVVHVR 207 (518)
Q Consensus 160 ~~LP------f~D~SFD-----~V~s~~~~l~~~~d---p~~~l~Ei~RVLKPGG~lvi~~~ 207 (518)
.+++ ..+++|| .|+++.+ |||+++ |..+++++.++|+|||++++...
T Consensus 141 ~~~~~~l~~~~~~~~~D~~~p~av~~~av-LH~l~d~~~p~~~l~~l~~~L~PGG~Lvls~~ 201 (277)
T 3giw_A 141 LDPASILDAPELRDTLDLTRPVALTVIAI-VHFVLDEDDAVGIVRRLLEPLPSGSYLAMSIG 201 (277)
T ss_dssp TCHHHHHTCHHHHTTCCTTSCCEEEEESC-GGGSCGGGCHHHHHHHHHTTSCTTCEEEEEEE
T ss_pred cChhhhhcccccccccCcCCcchHHhhhh-HhcCCchhhHHHHHHHHHHhCCCCcEEEEEec
Confidence 7752 1246677 5777776 999987 56799999999999999999753
No 205
>3duw_A OMT, O-methyltransferase, putative; alternating of alpha and beta with complex SAH; HET: SAH; 1.20A {Bacillus cereus} PDB: 3dul_A*
Probab=98.65 E-value=1.9e-08 Score=95.56 Aligned_cols=87 Identities=13% Similarity=0.129 Sum_probs=64.6
Q ss_pred CCCCeEEEEcCCCCHhHHHHHhc-C-CCcEEEEecCCC----------------CCcEEeccCCCC-C-CC---CCceeE
Q 010086 115 SQSAKSLCVETQYGQDVFALKEI-G-VEDSIGIFKKSS----------------KPLVISGEGHRI-P-FD---GNTFDF 171 (518)
Q Consensus 115 ~~~~rvLDVGcGtG~~~~~L~~~-g-~~~v~gID~s~~----------------~~l~~~~da~~L-P-f~---D~SFD~ 171 (518)
.++.+|||||||+|..+..+++. + ..+++|+|+++. ...++.+|+.+. | ++ +++||+
T Consensus 57 ~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~fD~ 136 (223)
T 3duw_A 57 QGARNILEIGTLGGYSTIWLARGLSSGGRVVTLEASEKHADIARSNIERANLNDRVEVRTGLALDSLQQIENEKYEPFDF 136 (223)
T ss_dssp HTCSEEEEECCTTSHHHHHHHTTCCSSCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHHHHHTTCCCCSE
T ss_pred hCCCEEEEecCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHHhcCCCCcCE
Confidence 46789999999999999888875 2 369999999741 123456776542 2 22 267999
Q ss_pred EEEcCceeeccCChHHHHHHHHhcccCCcEEEEE
Q 010086 172 VFVGGARLEKASKPLDFASEIVRTLKPEGFAVVH 205 (518)
Q Consensus 172 V~s~~~~l~~~~dp~~~l~Ei~RVLKPGG~lvi~ 205 (518)
|++... . .....+++++.|+|||||++++.
T Consensus 137 v~~d~~-~---~~~~~~l~~~~~~L~pgG~lv~~ 166 (223)
T 3duw_A 137 IFIDAD-K---QNNPAYFEWALKLSRPGTVIIGD 166 (223)
T ss_dssp EEECSC-G---GGHHHHHHHHHHTCCTTCEEEEE
T ss_pred EEEcCC-c---HHHHHHHHHHHHhcCCCcEEEEe
Confidence 998763 2 23467899999999999988885
No 206
>3ajd_A Putative methyltransferase MJ0026; tRNA, M5C, rossmann fold, structural genomics, riken structu genomics/proteomics initiative; 1.27A {Methanocaldococcus jannaschii} PDB: 3a4t_A
Probab=98.64 E-value=2.2e-08 Score=99.39 Aligned_cols=93 Identities=11% Similarity=0.105 Sum_probs=69.1
Q ss_pred CCCCCeEEEEcCCCCHhHHHHHhc--CCCcEEEEecCCC---------------CCcEEeccCCCCCC----CCCceeEE
Q 010086 114 LSQSAKSLCVETQYGQDVFALKEI--GVEDSIGIFKKSS---------------KPLVISGEGHRIPF----DGNTFDFV 172 (518)
Q Consensus 114 l~~~~rvLDVGcGtG~~~~~L~~~--g~~~v~gID~s~~---------------~~l~~~~da~~LPf----~D~SFD~V 172 (518)
++++.+|||+|||+|..+..+++. +...|+|+|+++. ...++.+|+.+++. ++++||.|
T Consensus 81 ~~~g~~VLDlgaG~G~~t~~la~~~~~~~~v~avD~~~~~l~~~~~~~~~~g~~~v~~~~~D~~~~~~~~~~~~~~fD~V 160 (274)
T 3ajd_A 81 PREDDFILDMCAAPGGKTTHLAQLMKNKGTIVAVEISKTRTKALKSNINRMGVLNTIIINADMRKYKDYLLKNEIFFDKI 160 (274)
T ss_dssp CCTTCEEEETTCTTCHHHHHHHHHTTTCSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCHHHHHHHHHHTTCCEEEE
T ss_pred CCCcCEEEEeCCCccHHHHHHHHHcCCCCEEEEECCCHHHHHHHHHHHHHhCCCcEEEEeCChHhcchhhhhccccCCEE
Confidence 568899999999999999888763 3469999999741 12345778877765 37899999
Q ss_pred EEcCc-----eee------------ccCChHHHHHHHHhcccCCcEEEEEe
Q 010086 173 FVGGA-----RLE------------KASKPLDFASEIVRTLKPEGFAVVHV 206 (518)
Q Consensus 173 ~s~~~-----~l~------------~~~dp~~~l~Ei~RVLKPGG~lvi~~ 206 (518)
++..- .++ ......++++++.|+|||||++++.+
T Consensus 161 l~d~Pcs~~g~~~~~p~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~st 211 (274)
T 3ajd_A 161 LLDAPCSGNIIKDKNRNVSEEDIKYCSLRQKELIDIGIDLLKKDGELVYST 211 (274)
T ss_dssp EEEECCC------------HHHHTGGGTCHHHHHHHHHHHEEEEEEEEEEE
T ss_pred EEcCCCCCCcccccCCCCCHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEEE
Confidence 98621 022 11345788999999999999998875
No 207
>2igt_A SAM dependent methyltransferase; alpha-beta sandwich, beta-barrel, structural genomics, PSI-2 structure initiative; HET: MSE SAM GOL; 1.89A {Agrobacterium tumefaciens str} SCOP: c.66.1.51
Probab=98.63 E-value=1.7e-08 Score=103.67 Aligned_cols=94 Identities=12% Similarity=0.100 Sum_probs=69.2
Q ss_pred CCCCeEEEEcCCCCHhHHHHHhcCCCcEEEEecCCC--------------C---CcEEeccCCCCCC----CCCceeEEE
Q 010086 115 SQSAKSLCVETQYGQDVFALKEIGVEDSIGIFKKSS--------------K---PLVISGEGHRIPF----DGNTFDFVF 173 (518)
Q Consensus 115 ~~~~rvLDVGcGtG~~~~~L~~~g~~~v~gID~s~~--------------~---~l~~~~da~~LPf----~D~SFD~V~ 173 (518)
.++.+|||+|||+|..+..+++.|. +|+|+|+++. . ..++++|+.++.. .+++||+|+
T Consensus 152 ~~~~~VLDlgcGtG~~sl~la~~ga-~V~~VD~s~~al~~a~~n~~~~gl~~~~v~~i~~D~~~~l~~~~~~~~~fD~Ii 230 (332)
T 2igt_A 152 DRPLKVLNLFGYTGVASLVAAAAGA-EVTHVDASKKAIGWAKENQVLAGLEQAPIRWICEDAMKFIQREERRGSTYDIIL 230 (332)
T ss_dssp SSCCEEEEETCTTCHHHHHHHHTTC-EEEEECSCHHHHHHHHHHHHHHTCTTSCEEEECSCHHHHHHHHHHHTCCBSEEE
T ss_pred CCCCcEEEcccccCHHHHHHHHcCC-EEEEEECCHHHHHHHHHHHHHcCCCccceEEEECcHHHHHHHHHhcCCCceEEE
Confidence 4678999999999999988888775 9999999841 1 2356777765421 167999999
Q ss_pred EcCc---------eeeccCChHHHHHHHHhcccCCcEEEEEecCC
Q 010086 174 VGGA---------RLEKASKPLDFASEIVRTLKPEGFAVVHVRAK 209 (518)
Q Consensus 174 s~~~---------~l~~~~dp~~~l~Ei~RVLKPGG~lvi~~~~~ 209 (518)
+.-- .+++..+...+++++.|+|||||++++.....
T Consensus 231 ~dPP~~~~~~~~~~~~~~~~~~~ll~~~~~~LkpgG~lli~~~~~ 275 (332)
T 2igt_A 231 TDPPKFGRGTHGEVWQLFDHLPLMLDICREILSPKALGLVLTAYS 275 (332)
T ss_dssp ECCCSEEECTTCCEEEHHHHHHHHHHHHHHTBCTTCCEEEEEECC
T ss_pred ECCccccCCchHHHHHHHHHHHHHHHHHHHhcCcCcEEEEEECCC
Confidence 8421 12333445688999999999999987775443
No 208
>1yub_A Ermam, rRNA methyltransferase; MLS antibiotics; NMR {Streptococcus pneumoniae} SCOP: c.66.1.24
Probab=98.62 E-value=2.3e-09 Score=104.65 Aligned_cols=92 Identities=13% Similarity=0.039 Sum_probs=67.9
Q ss_pred CCCCCCeEEEEcCCCCHhHHHHHhcCCCcEEEEecCCCC-------------CcEEeccCCCCCCCC-CceeEEEEcCc-
Q 010086 113 YLSQSAKSLCVETQYGQDVFALKEIGVEDSIGIFKKSSK-------------PLVISGEGHRIPFDG-NTFDFVFVGGA- 177 (518)
Q Consensus 113 ll~~~~rvLDVGcGtG~~~~~L~~~g~~~v~gID~s~~~-------------~l~~~~da~~LPf~D-~SFD~V~s~~~- 177 (518)
.+.++.+|||||||+|..+..+++.+ .+++|+|+++.. ..++.+|+.++|+++ ++| .|+++.-
T Consensus 26 ~~~~~~~VLDiG~G~G~~~~~l~~~~-~~v~~id~~~~~~~~a~~~~~~~~~v~~~~~D~~~~~~~~~~~f-~vv~n~Py 103 (245)
T 1yub_A 26 NLKETDTVYEIGTGKGHLTTKLAKIS-KQVTSIELDSHLFNLSSEKLKLNTRVTLIHQDILQFQFPNKQRY-KIVGNIPY 103 (245)
T ss_dssp CCCSSEEEEECSCCCSSCSHHHHHHS-SEEEESSSSCSSSSSSSCTTTTCSEEEECCSCCTTTTCCCSSEE-EEEEECCS
T ss_pred CCCCCCEEEEEeCCCCHHHHHHHHhC-CeEEEEECCHHHHHHHHHHhccCCceEEEECChhhcCcccCCCc-EEEEeCCc
Confidence 35678899999999999999888877 799999998521 124578999999984 789 5666421
Q ss_pred ---------eeeccCChHHHH----HHHHhcccCCcEEEEEe
Q 010086 178 ---------RLEKASKPLDFA----SEIVRTLKPEGFAVVHV 206 (518)
Q Consensus 178 ---------~l~~~~dp~~~l----~Ei~RVLKPGG~lvi~~ 206 (518)
.++|..++...+ +++.|+|||||.+++.+
T Consensus 104 ~~~~~~~~~~~~~~~~~~~~lm~q~e~a~rll~~~G~l~v~~ 145 (245)
T 1yub_A 104 HLSTQIIKKVVFESRASDIYLIVEEGFYKRTLDIHRTLGLLL 145 (245)
T ss_dssp SSCHHHHHHHHHHCCCEEEEEEEESSHHHHHHCGGGSHHHHT
T ss_pred cccHHHHHHHHhCCCCCeEEEEeeHHHHHHHhCCCCchhhhh
Confidence 022333444455 77999999999877654
No 209
>4a6d_A Hydroxyindole O-methyltransferase; melatonin, circadian clock; HET: SAM; 2.40A {Homo sapiens} PDB: 4a6e_A*
Probab=98.61 E-value=5.9e-07 Score=92.43 Aligned_cols=96 Identities=14% Similarity=-0.002 Sum_probs=71.8
Q ss_pred HHHHcCCCCCCCeEEEEcCCCCHhHHHHHhc-CCCcEEEEecCC--------------CCCcEEeccCCCCCCCCCceeE
Q 010086 107 DLISEGYLSQSAKSLCVETQYGQDVFALKEI-GVEDSIGIFKKS--------------SKPLVISGEGHRIPFDGNTFDF 171 (518)
Q Consensus 107 ~L~~~gll~~~~rvLDVGcGtG~~~~~L~~~-g~~~v~gID~s~--------------~~~l~~~~da~~LPf~D~SFD~ 171 (518)
.+.+.--++...+|||||||+|..+..+.+. +..+++..|+.. ....++.+|..+.|+++ +|+
T Consensus 170 ~~~~~~~~~~~~~v~DvGgG~G~~~~~l~~~~p~~~~~~~dlp~v~~~a~~~~~~~~~~rv~~~~gD~~~~~~~~--~D~ 247 (353)
T 4a6d_A 170 SVLTAFDLSVFPLMCDLGGGAGALAKECMSLYPGCKITVFDIPEVVWTAKQHFSFQEEEQIDFQEGDFFKDPLPE--ADL 247 (353)
T ss_dssp HHHHSSCGGGCSEEEEETCTTSHHHHHHHHHCSSCEEEEEECHHHHHHHHHHSCC--CCSEEEEESCTTTSCCCC--CSE
T ss_pred HHHHhcCcccCCeEEeeCCCCCHHHHHHHHhCCCceeEeccCHHHHHHHHHhhhhcccCceeeecCccccCCCCC--ceE
Confidence 3444334566789999999999999888764 334677788521 01234578877667664 699
Q ss_pred EEEcCceeeccCChH--HHHHHHHhcccCCcEEEEE
Q 010086 172 VFVGGARLEKASKPL--DFASEIVRTLKPEGFAVVH 205 (518)
Q Consensus 172 V~s~~~~l~~~~dp~--~~l~Ei~RVLKPGG~lvi~ 205 (518)
|++..+ ||+++|+. +.++++.|+|||||.++|.
T Consensus 248 ~~~~~v-lh~~~d~~~~~iL~~~~~al~pgg~lli~ 282 (353)
T 4a6d_A 248 YILARV-LHDWADGKCSHLLERIYHTCKPGGGILVI 282 (353)
T ss_dssp EEEESS-GGGSCHHHHHHHHHHHHHHCCTTCEEEEE
T ss_pred EEeeee-cccCCHHHHHHHHHHHHhhCCCCCEEEEE
Confidence 999998 99998874 6799999999999998876
No 210
>1uir_A Polyamine aminopropyltransferase; spermidien synthase, spermine synthase, riken STR genomics/proteomics initiative, RSGI; 2.00A {Thermus thermophilus} SCOP: c.66.1.17 PDB: 3anx_A*
Probab=98.60 E-value=4.7e-08 Score=99.33 Aligned_cols=91 Identities=13% Similarity=0.252 Sum_probs=68.8
Q ss_pred CCCCeEEEEcCCCCHhHHHHHhc-CCCcEEEEecCCC------------------CC--cEEeccCCC-CCCCCCceeEE
Q 010086 115 SQSAKSLCVETQYGQDVFALKEI-GVEDSIGIFKKSS------------------KP--LVISGEGHR-IPFDGNTFDFV 172 (518)
Q Consensus 115 ~~~~rvLDVGcGtG~~~~~L~~~-g~~~v~gID~s~~------------------~~--l~~~~da~~-LPf~D~SFD~V 172 (518)
+.+.+|||||||+|..+..+.+. +..+++++|+++. .+ .++.+|+.+ ++..+++||+|
T Consensus 76 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~ar~~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fD~I 155 (314)
T 1uir_A 76 PEPKRVLIVGGGEGATLREVLKHPTVEKAVMVDIDGELVEVAKRHMPEWHQGAFDDPRAVLVIDDARAYLERTEERYDVV 155 (314)
T ss_dssp SCCCEEEEEECTTSHHHHHHTTSTTCCEEEEEESCHHHHHHHHHHCHHHHTTGGGCTTEEEEESCHHHHHHHCCCCEEEE
T ss_pred CCCCeEEEEcCCcCHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHhHhhccccccCCceEEEEchHHHHHHhcCCCccEE
Confidence 45689999999999999888765 4579999999731 11 245677765 45568899999
Q ss_pred EEcCceeecc--CC------hHHHHHHHHhcccCCcEEEEEec
Q 010086 173 FVGGARLEKA--SK------PLDFASEIVRTLKPEGFAVVHVR 207 (518)
Q Consensus 173 ~s~~~~l~~~--~d------p~~~l~Ei~RVLKPGG~lvi~~~ 207 (518)
++... .+. .. ...+++++.|+|||||++++...
T Consensus 156 i~d~~--~~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~ 196 (314)
T 1uir_A 156 IIDLT--DPVGEDNPARLLYTVEFYRLVKAHLNPGGVMGMQTG 196 (314)
T ss_dssp EEECC--CCBSTTCGGGGGSSHHHHHHHHHTEEEEEEEEEEEE
T ss_pred EECCC--CcccccCcchhccHHHHHHHHHHhcCCCcEEEEEcc
Confidence 99763 333 12 25789999999999999998753
No 211
>3gjy_A Spermidine synthase; APC62791, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.47A {Corynebacterium glutamicum atcc 13032}
Probab=98.58 E-value=7.6e-08 Score=98.44 Aligned_cols=88 Identities=10% Similarity=0.079 Sum_probs=66.7
Q ss_pred CeEEEEcCCCCHhHHHHHh-cCCCcEEEEecCCC--------------C-CcEEeccCCCC--CCCCCceeEEEEcCcee
Q 010086 118 AKSLCVETQYGQDVFALKE-IGVEDSIGIFKKSS--------------K-PLVISGEGHRI--PFDGNTFDFVFVGGARL 179 (518)
Q Consensus 118 ~rvLDVGcGtG~~~~~L~~-~g~~~v~gID~s~~--------------~-~l~~~~da~~L--Pf~D~SFD~V~s~~~~l 179 (518)
.+|||||||+|..+..+.+ .+..++++||+++. + ..++.+|+.+. .+++++||+|++.. +
T Consensus 91 ~rVLdIG~G~G~la~~la~~~p~~~v~~VEidp~vi~~Ar~~~~~~~~~rv~v~~~Da~~~l~~~~~~~fDvIi~D~--~ 168 (317)
T 3gjy_A 91 LRITHLGGGACTMARYFADVYPQSRNTVVELDAELARLSREWFDIPRAPRVKIRVDDARMVAESFTPASRDVIIRDV--F 168 (317)
T ss_dssp CEEEEESCGGGHHHHHHHHHSTTCEEEEEESCHHHHHHHHHHSCCCCTTTEEEEESCHHHHHHTCCTTCEEEEEECC--S
T ss_pred CEEEEEECCcCHHHHHHHHHCCCcEEEEEECCHHHHHHHHHhccccCCCceEEEECcHHHHHhhccCCCCCEEEECC--C
Confidence 3999999999999988877 43358999999741 1 12467887654 46789999999964 3
Q ss_pred eccCC-----hHHHHHHHHhcccCCcEEEEEec
Q 010086 180 EKASK-----PLDFASEIVRTLKPEGFAVVHVR 207 (518)
Q Consensus 180 ~~~~d-----p~~~l~Ei~RVLKPGG~lvi~~~ 207 (518)
.+... ...+++++.|+|||||++++...
T Consensus 169 ~~~~~~~~L~t~efl~~~~r~LkpgGvlv~~~~ 201 (317)
T 3gjy_A 169 AGAITPQNFTTVEFFEHCHRGLAPGGLYVANCG 201 (317)
T ss_dssp TTSCCCGGGSBHHHHHHHHHHEEEEEEEEEEEE
T ss_pred CccccchhhhHHHHHHHHHHhcCCCcEEEEEec
Confidence 33221 25789999999999999999865
No 212
>1iy9_A Spermidine synthase; rossmann fold, structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacillus subtilis} SCOP: c.66.1.17
Probab=98.58 E-value=6.5e-08 Score=96.47 Aligned_cols=91 Identities=20% Similarity=0.261 Sum_probs=68.7
Q ss_pred CCCCeEEEEcCCCCHhHHHHHhc-CCCcEEEEecCCC-----------------CC--cEEeccCCC-CCCCCCceeEEE
Q 010086 115 SQSAKSLCVETQYGQDVFALKEI-GVEDSIGIFKKSS-----------------KP--LVISGEGHR-IPFDGNTFDFVF 173 (518)
Q Consensus 115 ~~~~rvLDVGcGtG~~~~~L~~~-g~~~v~gID~s~~-----------------~~--l~~~~da~~-LPf~D~SFD~V~ 173 (518)
..+.+|||||||+|..+..+.+. +..+++++|+++. .+ .++.+|+.+ ++..+++||+|+
T Consensus 74 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vEid~~~v~~ar~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~fD~Ii 153 (275)
T 1iy9_A 74 PNPEHVLVVGGGDGGVIREILKHPSVKKATLVDIDGKVIEYSKKFLPSIAGKLDDPRVDVQVDDGFMHIAKSENQYDVIM 153 (275)
T ss_dssp SSCCEEEEESCTTCHHHHHHTTCTTCSEEEEEESCHHHHHHHHHHCHHHHTTTTSTTEEEEESCSHHHHHTCCSCEEEEE
T ss_pred CCCCEEEEECCchHHHHHHHHhCCCCceEEEEECCHHHHHHHHHHhHhhccccCCCceEEEECcHHHHHhhCCCCeeEEE
Confidence 35689999999999999888765 5679999998731 11 245777765 455678999999
Q ss_pred EcCceeeccCC-----hHHHHHHHHhcccCCcEEEEEec
Q 010086 174 VGGARLEKASK-----PLDFASEIVRTLKPEGFAVVHVR 207 (518)
Q Consensus 174 s~~~~l~~~~d-----p~~~l~Ei~RVLKPGG~lvi~~~ 207 (518)
+.. ..+... ...+++++.|+|||||++++...
T Consensus 154 ~d~--~~~~~~~~~l~~~~~~~~~~~~L~pgG~lv~~~~ 190 (275)
T 1iy9_A 154 VDS--TEPVGPAVNLFTKGFYAGIAKALKEDGIFVAQTD 190 (275)
T ss_dssp ESC--SSCCSCCCCCSTTHHHHHHHHHEEEEEEEEEECC
T ss_pred ECC--CCCCCcchhhhHHHHHHHHHHhcCCCcEEEEEcC
Confidence 965 333211 25789999999999999999864
No 213
>2h00_A Methyltransferase 10 domain containing protein; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.54
Probab=98.58 E-value=4.5e-08 Score=95.10 Aligned_cols=88 Identities=9% Similarity=-0.021 Sum_probs=58.2
Q ss_pred CCCeEEEEcCCCCHhHHHHHhc-CCCcEEEEecCCC--------------C--CcEEeccCCCC---CCC---CCceeEE
Q 010086 116 QSAKSLCVETQYGQDVFALKEI-GVEDSIGIFKKSS--------------K--PLVISGEGHRI---PFD---GNTFDFV 172 (518)
Q Consensus 116 ~~~rvLDVGcGtG~~~~~L~~~-g~~~v~gID~s~~--------------~--~l~~~~da~~L---Pf~---D~SFD~V 172 (518)
++.+|||+|||+|..+..+++. +..+++|+|+++. . ..++++|+.+. +++ +++||+|
T Consensus 65 ~~~~vLDlG~G~G~~~~~la~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~fD~i 144 (254)
T 2h00_A 65 TLRRGIDIGTGASCIYPLLGATLNGWYFLATEVDDMCFNYAKKNVEQNNLSDLIKVVKVPQKTLLMDALKEESEIIYDFC 144 (254)
T ss_dssp CCCEEEEESCTTTTHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTCSSTTTSTTCCSCCBSEE
T ss_pred CCCEEEEeCCChhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHHcCCCccEEEEEcchhhhhhhhhhcccCCcccEE
Confidence 5779999999999988777653 2369999999741 1 23567887662 566 4799999
Q ss_pred EEcCceeeccC--------------Ch-HHHHHHHHhcccCCcEEEE
Q 010086 173 FVGGARLEKAS--------------KP-LDFASEIVRTLKPEGFAVV 204 (518)
Q Consensus 173 ~s~~~~l~~~~--------------dp-~~~l~Ei~RVLKPGG~lvi 204 (518)
++..- +++.. .| ..++.+++|+|||||.+.+
T Consensus 145 ~~npp-~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~LkpgG~l~~ 190 (254)
T 2h00_A 145 MCNPP-FFANQLEAKGVNSRNPRRPPPSSVNTGGITEIMAEGGELEF 190 (254)
T ss_dssp EECCC-CC-------------------------CTTTTHHHHTHHHH
T ss_pred EECCC-CccCcchhcccccccccccCCHHHHhhhHHHHEecCCEEEE
Confidence 99853 32221 11 2356889999999997654
No 214
>2hnk_A SAM-dependent O-methyltransferase; modified rossman fold; HET: SAH; 2.30A {Leptospira interrogans}
Probab=98.58 E-value=3.9e-08 Score=94.88 Aligned_cols=88 Identities=15% Similarity=0.200 Sum_probs=65.7
Q ss_pred CCCCeEEEEcCCCCHhHHHHHhc-C-CCcEEEEecCCC------------C----CcEEeccCCC-C-------------
Q 010086 115 SQSAKSLCVETQYGQDVFALKEI-G-VEDSIGIFKKSS------------K----PLVISGEGHR-I------------- 162 (518)
Q Consensus 115 ~~~~rvLDVGcGtG~~~~~L~~~-g-~~~v~gID~s~~------------~----~l~~~~da~~-L------------- 162 (518)
.++.+|||||||+|..+..+++. + ..+++++|+++. . ..++.+|+.+ +
T Consensus 59 ~~~~~VLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~~~~~~~~~~~~~~ 138 (239)
T 2hnk_A 59 SGAKRIIEIGTFTGYSSLCFASALPEDGKILCCDVSEEWTNVARKYWKENGLENKIFLKLGSALETLQVLIDSKSAPSWA 138 (239)
T ss_dssp HTCSEEEEECCTTCHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHCSSCCGGG
T ss_pred hCcCEEEEEeCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCEEEEECCHHHHHHHHHhhccccccc
Confidence 46789999999999999888775 2 369999998741 0 1234555433 2
Q ss_pred -CCCC--CceeEEEEcCceeeccCChHHHHHHHHhcccCCcEEEEEe
Q 010086 163 -PFDG--NTFDFVFVGGARLEKASKPLDFASEIVRTLKPEGFAVVHV 206 (518)
Q Consensus 163 -Pf~D--~SFD~V~s~~~~l~~~~dp~~~l~Ei~RVLKPGG~lvi~~ 206 (518)
.|++ ++||+|++... .+ +...+++++.++|||||++++..
T Consensus 139 ~~f~~~~~~fD~I~~~~~-~~---~~~~~l~~~~~~L~pgG~lv~~~ 181 (239)
T 2hnk_A 139 SDFAFGPSSIDLFFLDAD-KE---NYPNYYPLILKLLKPGGLLIADN 181 (239)
T ss_dssp TTTCCSTTCEEEEEECSC-GG---GHHHHHHHHHHHEEEEEEEEEEC
T ss_pred ccccCCCCCcCEEEEeCC-HH---HHHHHHHHHHHHcCCCeEEEEEc
Confidence 2555 89999999764 33 34578999999999999999863
No 215
>1sui_A Caffeoyl-COA O-methyltransferase; rossmann fold, protein-cofactor-substrate complex; HET: SAH FRE; 2.70A {Medicago sativa} SCOP: c.66.1.1 PDB: 1sus_A*
Probab=98.57 E-value=3.5e-08 Score=96.70 Aligned_cols=87 Identities=11% Similarity=0.172 Sum_probs=66.0
Q ss_pred CCCCeEEEEcCCCCHhHHHHHhc-C-CCcEEEEecCCC-----------C-----CcEEeccCCCC-CC------CCCce
Q 010086 115 SQSAKSLCVETQYGQDVFALKEI-G-VEDSIGIFKKSS-----------K-----PLVISGEGHRI-PF------DGNTF 169 (518)
Q Consensus 115 ~~~~rvLDVGcGtG~~~~~L~~~-g-~~~v~gID~s~~-----------~-----~l~~~~da~~L-Pf------~D~SF 169 (518)
.++.+|||||||+|..+..+++. + ..+++++|+++. . ..++.+|+.+. |. ++++|
T Consensus 78 ~~~~~VLeiG~G~G~~~~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~i~~~~gda~~~l~~l~~~~~~~~~f 157 (247)
T 1sui_A 78 INAKNTMEIGVYTGYSLLATALAIPEDGKILAMDINKENYELGLPVIKKAGVDHKIDFREGPALPVLDEMIKDEKNHGSY 157 (247)
T ss_dssp TTCCEEEEECCGGGHHHHHHHHHSCTTCEEEEEESCCHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHSGGGTTCB
T ss_pred hCcCEEEEeCCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCeEEEECCHHHHHHHHHhccCCCCCE
Confidence 35679999999999999888764 2 369999999852 0 12456777543 42 26899
Q ss_pred eEEEEcCceeeccCChHHHHHHHHhcccCCcEEEEE
Q 010086 170 DFVFVGGARLEKASKPLDFASEIVRTLKPEGFAVVH 205 (518)
Q Consensus 170 D~V~s~~~~l~~~~dp~~~l~Ei~RVLKPGG~lvi~ 205 (518)
|+|++... ..+...+++++.|+|||||++++.
T Consensus 158 D~V~~d~~----~~~~~~~l~~~~~~LkpGG~lv~d 189 (247)
T 1sui_A 158 DFIFVDAD----KDNYLNYHKRLIDLVKVGGVIGYD 189 (247)
T ss_dssp SEEEECSC----STTHHHHHHHHHHHBCTTCCEEEE
T ss_pred EEEEEcCc----hHHHHHHHHHHHHhCCCCeEEEEe
Confidence 99998653 235678899999999999999885
No 216
>2yxl_A PH0851 protein, 450AA long hypothetical FMU protein; FMU-homolog, methyltransferase, structural genomics, NPPSFA; HET: SFG; 2.55A {Pyrococcus horikoshii}
Probab=98.57 E-value=9.9e-08 Score=101.59 Aligned_cols=93 Identities=12% Similarity=0.125 Sum_probs=70.1
Q ss_pred CCCCCeEEEEcCCCCHhHHHHHhc-C-CCcEEEEecCCC---------------CCcEEeccCCCCC--CCCCceeEEEE
Q 010086 114 LSQSAKSLCVETQYGQDVFALKEI-G-VEDSIGIFKKSS---------------KPLVISGEGHRIP--FDGNTFDFVFV 174 (518)
Q Consensus 114 l~~~~rvLDVGcGtG~~~~~L~~~-g-~~~v~gID~s~~---------------~~l~~~~da~~LP--f~D~SFD~V~s 174 (518)
++++.+|||+|||+|..+..+++. + ...++|+|+++. ...++.+|+..++ |++++||.|++
T Consensus 257 ~~~g~~VLDlgaG~G~~t~~la~~~~~~~~v~a~D~s~~~l~~~~~~~~~~g~~~v~~~~~D~~~~~~~~~~~~fD~Vl~ 336 (450)
T 2yxl_A 257 PKPGETVVDLAAAPGGKTTHLAELMKNKGKIYAFDVDKMRMKRLKDFVKRMGIKIVKPLVKDARKAPEIIGEEVADKVLL 336 (450)
T ss_dssp CCTTCEEEESSCTTCHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHTTCCSEEEECSCTTCCSSSSCSSCEEEEEE
T ss_pred CCCcCEEEEeCCCccHHHHHHHHHcCCCCEEEEEcCCHHHHHHHHHHHHHcCCCcEEEEEcChhhcchhhccCCCCEEEE
Confidence 578899999999999999888763 3 268999999841 1234578888887 77789999996
Q ss_pred c-----CceeeccCCh----------------HHHHHHHHhcccCCcEEEEEe
Q 010086 175 G-----GARLEKASKP----------------LDFASEIVRTLKPEGFAVVHV 206 (518)
Q Consensus 175 ~-----~~~l~~~~dp----------------~~~l~Ei~RVLKPGG~lvi~~ 206 (518)
. ...+++.++. ...++++.++|||||++++.+
T Consensus 337 D~Pcsg~g~~~~~pd~~~~~~~~~~~~l~~~q~~iL~~a~~~LkpGG~lvy~t 389 (450)
T 2yxl_A 337 DAPCTSSGTIGKNPELRWRLREDKINEMSQLQRELLESAARLVKPGGRLLYTT 389 (450)
T ss_dssp ECCCCCGGGTTTSTTHHHHCCTTSHHHHHHHHHHHHHHHHTTEEEEEEEEEEE
T ss_pred cCCCCCCeeeccChhhhhhCCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEe
Confidence 2 1124443332 467999999999999998764
No 217
>1sqg_A SUN protein, FMU protein; rossmann-fold, mixed beta sheet, methyltransferase-fold, RNA-binding domain; 1.65A {Escherichia coli} SCOP: a.79.1.3 c.66.1.38 PDB: 1sqf_A
Probab=98.57 E-value=1.3e-07 Score=99.88 Aligned_cols=93 Identities=15% Similarity=0.182 Sum_probs=71.0
Q ss_pred CCCCCeEEEEcCCCCHhHHHHHhcC-CCcEEEEecCCC--------------CCcEEeccCCCCC--CCCCceeEEEEc-
Q 010086 114 LSQSAKSLCVETQYGQDVFALKEIG-VEDSIGIFKKSS--------------KPLVISGEGHRIP--FDGNTFDFVFVG- 175 (518)
Q Consensus 114 l~~~~rvLDVGcGtG~~~~~L~~~g-~~~v~gID~s~~--------------~~l~~~~da~~LP--f~D~SFD~V~s~- 175 (518)
.+++.+|||+|||+|..+..+++.+ ...++|+|+++. ...++.+|+..++ +++++||.|++.
T Consensus 244 ~~~g~~VLDlgaG~G~~t~~la~~~~~~~v~a~D~~~~~l~~~~~~~~~~g~~~~~~~~D~~~~~~~~~~~~fD~Vl~D~ 323 (429)
T 1sqg_A 244 PQNGEHILDLCAAPGGKTTHILEVAPEAQVVAVDIDEQRLSRVYDNLKRLGMKATVKQGDGRYPSQWCGEQQFDRILLDA 323 (429)
T ss_dssp CCTTCEEEEESCTTCHHHHHHHHHCTTCEEEEEESSTTTHHHHHHHHHHTTCCCEEEECCTTCTHHHHTTCCEEEEEEEC
T ss_pred CCCcCeEEEECCCchHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHHHHcCCCeEEEeCchhhchhhcccCCCCEEEEeC
Confidence 5788999999999999998887754 269999999863 1235678888886 778899999962
Q ss_pred ---C-ceeeccCCh----------------HHHHHHHHhcccCCcEEEEEe
Q 010086 176 ---G-ARLEKASKP----------------LDFASEIVRTLKPEGFAVVHV 206 (518)
Q Consensus 176 ---~-~~l~~~~dp----------------~~~l~Ei~RVLKPGG~lvi~~ 206 (518)
. ..+++.++. ...++++.+.|||||++++.+
T Consensus 324 Pcsg~g~~~~~p~~~~~~~~~~~~~l~~~q~~~L~~a~~~LkpGG~lvyst 374 (429)
T 1sqg_A 324 PCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAIWPHLKTGGTLVYAT 374 (429)
T ss_dssp CCCCGGGTTTCTTHHHHCCTTHHHHHHHHHHHHHHHHGGGEEEEEEEEEEE
T ss_pred CCCcccccCCCcchhhcCCHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEE
Confidence 2 124443332 367899999999999998865
No 218
>1xj5_A Spermidine synthase 1; structural genomics, protein structure initiative, CESG, AT1G23820, putrescine aminopropyl transferase, SPDS1; 2.70A {Arabidopsis thaliana} SCOP: c.66.1.17 PDB: 2q41_A
Probab=98.57 E-value=1.3e-07 Score=97.24 Aligned_cols=91 Identities=16% Similarity=0.232 Sum_probs=67.5
Q ss_pred CCCCCeEEEEcCCCCHhHHHHHhc-CCCcEEEEecCCC-------------------CCcEEeccCCCC--CCCCCceeE
Q 010086 114 LSQSAKSLCVETQYGQDVFALKEI-GVEDSIGIFKKSS-------------------KPLVISGEGHRI--PFDGNTFDF 171 (518)
Q Consensus 114 l~~~~rvLDVGcGtG~~~~~L~~~-g~~~v~gID~s~~-------------------~~l~~~~da~~L--Pf~D~SFD~ 171 (518)
.+.+.+|||||||+|..+..+.+. +..+|+++|+++. ...++.+|+.+. .+++++||+
T Consensus 118 ~~~~~~VLdIG~G~G~~a~~la~~~~~~~V~~VDis~~~l~~Ar~~~~~~~~gl~~~rv~~~~~D~~~~l~~~~~~~fDl 197 (334)
T 1xj5_A 118 IPNPKKVLVIGGGDGGVLREVARHASIEQIDMCEIDKMVVDVSKQFFPDVAIGYEDPRVNLVIGDGVAFLKNAAEGSYDA 197 (334)
T ss_dssp SSCCCEEEEETCSSSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGSTTEEEEESCHHHHHHTSCTTCEEE
T ss_pred CCCCCEEEEECCCccHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhhccccCCCcEEEEECCHHHHHHhccCCCccE
Confidence 355689999999999999888765 3579999999731 112457776653 346789999
Q ss_pred EEEcCceeeccC--C---hHHHHHHHHhcccCCcEEEEEe
Q 010086 172 VFVGGARLEKAS--K---PLDFASEIVRTLKPEGFAVVHV 206 (518)
Q Consensus 172 V~s~~~~l~~~~--d---p~~~l~Ei~RVLKPGG~lvi~~ 206 (518)
|++.. .+... + ...+++++.|+|||||++++..
T Consensus 198 Ii~d~--~~p~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~ 235 (334)
T 1xj5_A 198 VIVDS--SDPIGPAKELFEKPFFQSVARALRPGGVVCTQA 235 (334)
T ss_dssp EEECC--CCTTSGGGGGGSHHHHHHHHHHEEEEEEEEEEC
T ss_pred EEECC--CCccCcchhhhHHHHHHHHHHhcCCCcEEEEec
Confidence 99964 22111 1 2578999999999999999974
No 219
>1inl_A Spermidine synthase; beta-barrel, rossman fold, structural genomics, PSI, protein structure initiative; 1.50A {Thermotoga maritima} SCOP: c.66.1.17 PDB: 1jq3_A*
Probab=98.56 E-value=7.6e-08 Score=97.00 Aligned_cols=91 Identities=16% Similarity=0.188 Sum_probs=66.7
Q ss_pred CCCCeEEEEcCCCCHhHHHHHhc-CCCcEEEEecCCC-----------------C--CcEEeccCCC-CCCCCCceeEEE
Q 010086 115 SQSAKSLCVETQYGQDVFALKEI-GVEDSIGIFKKSS-----------------K--PLVISGEGHR-IPFDGNTFDFVF 173 (518)
Q Consensus 115 ~~~~rvLDVGcGtG~~~~~L~~~-g~~~v~gID~s~~-----------------~--~l~~~~da~~-LPf~D~SFD~V~ 173 (518)
..+.+|||||||+|..+..+.+. +..+++++|+++. . ..++.+|+.+ ++..+++||+|+
T Consensus 89 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~~~~a~~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fD~Ii 168 (296)
T 1inl_A 89 PNPKKVLIIGGGDGGTLREVLKHDSVEKAILCEVDGLVIEAARKYLKQTSCGFDDPRAEIVIANGAEYVRKFKNEFDVII 168 (296)
T ss_dssp SSCCEEEEEECTTCHHHHHHTTSTTCSEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHGGGCSSCEEEEE
T ss_pred CCCCEEEEEcCCcCHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHhHhhccccCCCceEEEECcHHHHHhhCCCCceEEE
Confidence 35689999999999999888775 5579999999731 1 1245677655 455678999999
Q ss_pred EcCceeec-cC-----ChHHHHHHHHhcccCCcEEEEEec
Q 010086 174 VGGARLEK-AS-----KPLDFASEIVRTLKPEGFAVVHVR 207 (518)
Q Consensus 174 s~~~~l~~-~~-----dp~~~l~Ei~RVLKPGG~lvi~~~ 207 (518)
+.. .++ .. ....+++++.|+|||||++++...
T Consensus 169 ~d~--~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~ 206 (296)
T 1inl_A 169 IDS--TDPTAGQGGHLFTEEFYQACYDALKEDGVFSAETE 206 (296)
T ss_dssp EEC------------CCSHHHHHHHHHHEEEEEEEEEECC
T ss_pred EcC--CCcccCchhhhhHHHHHHHHHHhcCCCcEEEEEcc
Confidence 854 332 21 125789999999999999999854
No 220
>2pt6_A Spermidine synthase; transferase, structural genomics consor SGC,dcadoMet complex; HET: S4M 1PG; 2.00A {Plasmodium falciparum} PDB: 2pss_A* 2pt9_A*
Probab=98.56 E-value=9.6e-08 Score=97.52 Aligned_cols=91 Identities=21% Similarity=0.254 Sum_probs=67.4
Q ss_pred CCCCeEEEEcCCCCHhHHHHHhc-CCCcEEEEecCCC---------C----------CcEEeccCCC-CCCCCCceeEEE
Q 010086 115 SQSAKSLCVETQYGQDVFALKEI-GVEDSIGIFKKSS---------K----------PLVISGEGHR-IPFDGNTFDFVF 173 (518)
Q Consensus 115 ~~~~rvLDVGcGtG~~~~~L~~~-g~~~v~gID~s~~---------~----------~l~~~~da~~-LPf~D~SFD~V~ 173 (518)
.++.+|||||||+|..+..+.+. +..+++++|+++. + ..++.+|+.+ ++..+++||+|+
T Consensus 115 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDis~~~l~~ar~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fDvIi 194 (321)
T 2pt6_A 115 KEPKNVLVVGGGDGGIIRELCKYKSVENIDICEIDETVIEVSKIYFKNISCGYEDKRVNVFIEDASKFLENVTNTYDVII 194 (321)
T ss_dssp SSCCEEEEEECTTCHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCTTTSGGGGSTTEEEEESCHHHHHHHCCSCEEEEE
T ss_pred CCCCEEEEEcCCccHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhhccccCCCcEEEEEccHHHHHhhcCCCceEEE
Confidence 45689999999999999888765 4579999999731 1 1245677654 344578999999
Q ss_pred EcCceeeccC---C--hHHHHHHHHhcccCCcEEEEEec
Q 010086 174 VGGARLEKAS---K--PLDFASEIVRTLKPEGFAVVHVR 207 (518)
Q Consensus 174 s~~~~l~~~~---d--p~~~l~Ei~RVLKPGG~lvi~~~ 207 (518)
+.. .++.. . ...+++++.|+|||||++++...
T Consensus 195 ~d~--~~p~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~ 231 (321)
T 2pt6_A 195 VDS--SDPIGPAETLFNQNFYEKIYNALKPNGYCVAQCE 231 (321)
T ss_dssp EEC--CCSSSGGGGGSSHHHHHHHHHHEEEEEEEEEEEC
T ss_pred ECC--cCCCCcchhhhHHHHHHHHHHhcCCCcEEEEEcC
Confidence 865 23221 1 15789999999999999999864
No 221
>2cmg_A Spermidine synthase; transferase, putrescine aminopropyltransferase, spermidine biosynthesis, polyamine biosynthesis, SPEE; 2.0A {Helicobacter pylori} PDB: 2cmh_A
Probab=98.55 E-value=2.4e-07 Score=92.00 Aligned_cols=84 Identities=11% Similarity=-0.016 Sum_probs=65.7
Q ss_pred CCCCeEEEEcCCCCHhHHHHHhcCCCcEEEEecCC--------C-C----------CcEEeccCCCCCCCCCceeEEEEc
Q 010086 115 SQSAKSLCVETQYGQDVFALKEIGVEDSIGIFKKS--------S-K----------PLVISGEGHRIPFDGNTFDFVFVG 175 (518)
Q Consensus 115 ~~~~rvLDVGcGtG~~~~~L~~~g~~~v~gID~s~--------~-~----------~l~~~~da~~LPf~D~SFD~V~s~ 175 (518)
..+.+|||||||+|..+..+.+.+ .+++++|+++ . + ..++.+|+.+.+ ++||+|++.
T Consensus 71 ~~~~~VL~iG~G~G~~~~~ll~~~-~~v~~veid~~~i~~ar~~~~~~~~~~~~~rv~~~~~D~~~~~---~~fD~Ii~d 146 (262)
T 2cmg_A 71 KELKEVLIVDGFDLELAHQLFKYD-THIDFVQADEKILDSFISFFPHFHEVKNNKNFTHAKQLLDLDI---KKYDLIFCL 146 (262)
T ss_dssp SCCCEEEEESSCCHHHHHHHTTSS-CEEEEECSCHHHHGGGTTTSTTHHHHHTCTTEEEESSGGGSCC---CCEEEEEES
T ss_pred CCCCEEEEEeCCcCHHHHHHHhCC-CEEEEEECCHHHHHHHHHHHHhhccccCCCeEEEEechHHHHH---hhCCEEEEC
Confidence 355799999999999998776667 8999999873 1 1 123467776654 889999986
Q ss_pred CceeeccCChHHHHHHHHhcccCCcEEEEEecC
Q 010086 176 GARLEKASKPLDFASEIVRTLKPEGFAVVHVRA 208 (518)
Q Consensus 176 ~~~l~~~~dp~~~l~Ei~RVLKPGG~lvi~~~~ 208 (518)
. .+|..+++++.|+|||||++++....
T Consensus 147 ~------~dp~~~~~~~~~~L~pgG~lv~~~~~ 173 (262)
T 2cmg_A 147 Q------EPDIHRIDGLKRMLKEDGVFISVAKH 173 (262)
T ss_dssp S------CCCHHHHHHHHTTEEEEEEEEEEEEC
T ss_pred C------CChHHHHHHHHHhcCCCcEEEEEcCC
Confidence 3 36777999999999999999997543
No 222
>2o07_A Spermidine synthase; structural genomics, structural genomics consortium, SGC, transferase; HET: SPD MTA; 1.89A {Homo sapiens} SCOP: c.66.1.17 PDB: 2o06_A* 2o05_A* 2o0l_A* 3rw9_A*
Probab=98.54 E-value=1.3e-07 Score=95.89 Aligned_cols=90 Identities=13% Similarity=0.183 Sum_probs=66.4
Q ss_pred CCCCeEEEEcCCCCHhHHHHHhc-CCCcEEEEecCCC-----------------C--CcEEeccCCC-CCCCCCceeEEE
Q 010086 115 SQSAKSLCVETQYGQDVFALKEI-GVEDSIGIFKKSS-----------------K--PLVISGEGHR-IPFDGNTFDFVF 173 (518)
Q Consensus 115 ~~~~rvLDVGcGtG~~~~~L~~~-g~~~v~gID~s~~-----------------~--~l~~~~da~~-LPf~D~SFD~V~ 173 (518)
..+.+|||||||+|..+..+.+. +..+++++|+++. . ..++.+|+.+ ++..+++||+|+
T Consensus 94 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~ar~~~~~~~~~~~~~rv~v~~~Da~~~l~~~~~~fD~Ii 173 (304)
T 2o07_A 94 PNPRKVLIIGGGDGGVLREVVKHPSVESVVQCEIDEDVIQVSKKFLPGMAIGYSSSKLTLHVGDGFEFMKQNQDAFDVII 173 (304)
T ss_dssp SSCCEEEEEECTTSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHHHTCSSCEEEEE
T ss_pred CCCCEEEEECCCchHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHhHHhhcccCCCcEEEEECcHHHHHhhCCCCceEEE
Confidence 45689999999999999888775 3579999998731 1 1245677765 456688999999
Q ss_pred EcCceeeccC-----ChHHHHHHHHhcccCCcEEEEEe
Q 010086 174 VGGARLEKAS-----KPLDFASEIVRTLKPEGFAVVHV 206 (518)
Q Consensus 174 s~~~~l~~~~-----dp~~~l~Ei~RVLKPGG~lvi~~ 206 (518)
+... .+.. ....+++++.|+|||||++++..
T Consensus 174 ~d~~--~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~ 209 (304)
T 2o07_A 174 TDSS--DPMGPAESLFKESYYQLMKTALKEDGVLCCQG 209 (304)
T ss_dssp EECC-------------CHHHHHHHHHEEEEEEEEEEE
T ss_pred ECCC--CCCCcchhhhHHHHHHHHHhccCCCeEEEEec
Confidence 9653 3221 12468999999999999999875
No 223
>2qm3_A Predicted methyltransferase; putative methyltransferase, structural genomics, pyrococcus PSI-2, protein structure initiative; HET: MSE; 2.05A {Pyrococcus furiosus dsm 3638}
Probab=98.54 E-value=1.5e-07 Score=97.71 Aligned_cols=91 Identities=11% Similarity=0.032 Sum_probs=69.6
Q ss_pred CCCCeEEEEcCCCCHhHHHHHhcCC-CcEEEEecCCC---------------CCcEEeccCCC-CCC-CCCceeEEEEcC
Q 010086 115 SQSAKSLCVETQYGQDVFALKEIGV-EDSIGIFKKSS---------------KPLVISGEGHR-IPF-DGNTFDFVFVGG 176 (518)
Q Consensus 115 ~~~~rvLDVGcGtG~~~~~L~~~g~-~~v~gID~s~~---------------~~l~~~~da~~-LPf-~D~SFD~V~s~~ 176 (518)
.++.+|||+| |+|..+..++..+. .+|+|+|+++. ...++.+|+.+ +|. .+++||+|++..
T Consensus 171 ~~~~~VLDlG-G~G~~~~~la~~~~~~~v~~vDi~~~~l~~a~~~~~~~g~~~v~~~~~D~~~~l~~~~~~~fD~Vi~~~ 249 (373)
T 2qm3_A 171 LENKDIFVLG-DDDLTSIALMLSGLPKRIAVLDIDERLTKFIEKAANEIGYEDIEIFTFDLRKPLPDYALHKFDTFITDP 249 (373)
T ss_dssp STTCEEEEES-CTTCHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHHHTCCCEEEECCCTTSCCCTTTSSCBSEEEECC
T ss_pred CCCCEEEEEC-CCCHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCEEEEEChhhhhchhhccCCccEEEECC
Confidence 3678999999 99999988887764 69999999741 12356889988 775 578999999976
Q ss_pred ceeeccCChHHHHHHHHhcccCCc-EEEEEecC
Q 010086 177 ARLEKASKPLDFASEIVRTLKPEG-FAVVHVRA 208 (518)
Q Consensus 177 ~~l~~~~dp~~~l~Ei~RVLKPGG-~lvi~~~~ 208 (518)
. ++.. ....+++++.|+||||| ++++.+..
T Consensus 250 p-~~~~-~~~~~l~~~~~~LkpgG~~~~~~~~~ 280 (373)
T 2qm3_A 250 P-ETLE-AIRAFVGRGIATLKGPRCAGYFGITR 280 (373)
T ss_dssp C-SSHH-HHHHHHHHHHHTBCSTTCEEEEEECT
T ss_pred C-CchH-HHHHHHHHHHHHcccCCeEEEEEEec
Confidence 4 4332 24678999999999999 44665543
No 224
>3cbg_A O-methyltransferase; cyanobacterium; HET: SAH FER 4FE; 2.00A {Synechocystis SP}
Probab=98.52 E-value=8.6e-08 Score=92.53 Aligned_cols=86 Identities=14% Similarity=0.155 Sum_probs=64.9
Q ss_pred CCCeEEEEcCCCCHhHHHHHhc-C-CCcEEEEecCCC----------------CCcEEeccCC----CCCCCC--CceeE
Q 010086 116 QSAKSLCVETQYGQDVFALKEI-G-VEDSIGIFKKSS----------------KPLVISGEGH----RIPFDG--NTFDF 171 (518)
Q Consensus 116 ~~~rvLDVGcGtG~~~~~L~~~-g-~~~v~gID~s~~----------------~~l~~~~da~----~LPf~D--~SFD~ 171 (518)
++.+|||||||+|..+..+++. + ..+++++|+++. ...++.+++. .+|+++ ++||+
T Consensus 72 ~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~l~~l~~~~~~~~fD~ 151 (232)
T 3cbg_A 72 GAKQVLEIGVFRGYSALAMALQLPPDGQIIACDQDPNATAIAKKYWQKAGVAEKISLRLGPALATLEQLTQGKPLPEFDL 151 (232)
T ss_dssp TCCEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHHHHHHHHHTSSSCCCEEE
T ss_pred CCCEEEEecCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHHhcCCCCCcCE
Confidence 5679999999999999888764 2 358999999741 1123466653 345555 89999
Q ss_pred EEEcCceeeccCChHHHHHHHHhcccCCcEEEEE
Q 010086 172 VFVGGARLEKASKPLDFASEIVRTLKPEGFAVVH 205 (518)
Q Consensus 172 V~s~~~~l~~~~dp~~~l~Ei~RVLKPGG~lvi~ 205 (518)
|++... . .+...+++++.|+|||||++++.
T Consensus 152 V~~d~~-~---~~~~~~l~~~~~~LkpgG~lv~~ 181 (232)
T 3cbg_A 152 IFIDAD-K---RNYPRYYEIGLNLLRRGGLMVID 181 (232)
T ss_dssp EEECSC-G---GGHHHHHHHHHHTEEEEEEEEEE
T ss_pred EEECCC-H---HHHHHHHHHHHHHcCCCeEEEEe
Confidence 998653 2 34567899999999999999986
No 225
>1mjf_A Spermidine synthase; spermidine synthetase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus furiosus} SCOP: c.66.1.17 PDB: 2e5w_A* 2zsu_A*
Probab=98.52 E-value=8.5e-08 Score=95.77 Aligned_cols=90 Identities=16% Similarity=0.240 Sum_probs=65.8
Q ss_pred CCCCeEEEEcCCCCHhHHHHHhcCCCcEEEEecCCC-----------------------CC--cEEeccCCC-CCCCCCc
Q 010086 115 SQSAKSLCVETQYGQDVFALKEIGVEDSIGIFKKSS-----------------------KP--LVISGEGHR-IPFDGNT 168 (518)
Q Consensus 115 ~~~~rvLDVGcGtG~~~~~L~~~g~~~v~gID~s~~-----------------------~~--l~~~~da~~-LPf~D~S 168 (518)
..+.+|||||||+|..+..+.+.+..+++++|+++. .+ .++.+|+.+ ++. +++
T Consensus 74 ~~~~~VLdiG~G~G~~~~~l~~~~~~~v~~vDid~~~i~~ar~~~~~~~~l~~~~~~~~~~~v~~~~~D~~~~l~~-~~~ 152 (281)
T 1mjf_A 74 PKPKRVLVIGGGDGGTVREVLQHDVDEVIMVEIDEDVIMVSKDLIKIDNGLLEAMLNGKHEKAKLTIGDGFEFIKN-NRG 152 (281)
T ss_dssp SCCCEEEEEECTTSHHHHHHTTSCCSEEEEEESCHHHHHHHHHHTCTTTTHHHHHHTTCCSSEEEEESCHHHHHHH-CCC
T ss_pred CCCCeEEEEcCCcCHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHhhccccccccccCCCCcEEEEECchHHHhcc-cCC
Confidence 456899999999999998887666679999998731 11 234566544 233 689
Q ss_pred eeEEEEcCceeeccCC-----hHHHHHHHHhcccCCcEEEEEec
Q 010086 169 FDFVFVGGARLEKASK-----PLDFASEIVRTLKPEGFAVVHVR 207 (518)
Q Consensus 169 FD~V~s~~~~l~~~~d-----p~~~l~Ei~RVLKPGG~lvi~~~ 207 (518)
||+|++.. .++... ...+++++.|+|||||++++...
T Consensus 153 fD~Ii~d~--~~~~~~~~~l~~~~~l~~~~~~L~pgG~lv~~~~ 194 (281)
T 1mjf_A 153 FDVIIADS--TDPVGPAKVLFSEEFYRYVYDALNNPGIYVTQAG 194 (281)
T ss_dssp EEEEEEEC--CCCC-----TTSHHHHHHHHHHEEEEEEEEEEEE
T ss_pred eeEEEECC--CCCCCcchhhhHHHHHHHHHHhcCCCcEEEEEcC
Confidence 99999865 332211 25689999999999999999754
No 226
>2b2c_A Spermidine synthase; beta-alpha, transferase; 2.50A {Caenorhabditis elegans} SCOP: c.66.1.17
Probab=98.49 E-value=8.8e-08 Score=97.63 Aligned_cols=91 Identities=14% Similarity=0.187 Sum_probs=64.8
Q ss_pred CCCCeEEEEcCCCCHhHHHHHhc-CCCcEEEEecCCC---------C--------C--cEEeccCCC-CCCCCCceeEEE
Q 010086 115 SQSAKSLCVETQYGQDVFALKEI-GVEDSIGIFKKSS---------K--------P--LVISGEGHR-IPFDGNTFDFVF 173 (518)
Q Consensus 115 ~~~~rvLDVGcGtG~~~~~L~~~-g~~~v~gID~s~~---------~--------~--l~~~~da~~-LPf~D~SFD~V~ 173 (518)
..+.+|||||||+|..+..+.+. +..+++++|+++. + + .++.+|+.+ ++..+++||+|+
T Consensus 107 ~~~~~VLdIG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~Ar~~~~~~~~~~~~~rv~~~~~D~~~~l~~~~~~fD~Ii 186 (314)
T 2b2c_A 107 PDPKRVLIIGGGDGGILREVLKHESVEKVTMCEIDEMVIDVAKKFLPGMSCGFSHPKLDLFCGDGFEFLKNHKNEFDVII 186 (314)
T ss_dssp SSCCEEEEESCTTSHHHHHHTTCTTCCEEEEECSCHHHHHHHHHHCTTTSGGGGCTTEEEECSCHHHHHHHCTTCEEEEE
T ss_pred CCCCEEEEEcCCcCHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHHhccccCCCCEEEEEChHHHHHHhcCCCceEEE
Confidence 45679999999999999888765 3579999999731 1 1 235667654 445678999999
Q ss_pred EcCceeeccCCh-----HHHHHHHHhcccCCcEEEEEec
Q 010086 174 VGGARLEKASKP-----LDFASEIVRTLKPEGFAVVHVR 207 (518)
Q Consensus 174 s~~~~l~~~~dp-----~~~l~Ei~RVLKPGG~lvi~~~ 207 (518)
+.. .++...+ ..+++++.|+|||||++++..+
T Consensus 187 ~d~--~~~~~~~~~l~t~~~l~~~~~~LkpgG~lv~~~~ 223 (314)
T 2b2c_A 187 TDS--SDPVGPAESLFGQSYYELLRDALKEDGILSSQGE 223 (314)
T ss_dssp ECC--C-------------HHHHHHHHEEEEEEEEEECC
T ss_pred EcC--CCCCCcchhhhHHHHHHHHHhhcCCCeEEEEECC
Confidence 965 3433211 5789999999999999999763
No 227
>2i7c_A Spermidine synthase; transferase, structural genomics consor; HET: AAT 1PG; 1.71A {Plasmodium falciparum} PDB: 2hte_A* 3b7p_A* 3rie_A* 2pwp_A*
Probab=98.48 E-value=2.3e-07 Score=92.84 Aligned_cols=91 Identities=21% Similarity=0.261 Sum_probs=67.1
Q ss_pred CCCCeEEEEcCCCCHhHHHHHhc-CCCcEEEEecCCC---------C--------C--cEEeccCCC-CCCCCCceeEEE
Q 010086 115 SQSAKSLCVETQYGQDVFALKEI-GVEDSIGIFKKSS---------K--------P--LVISGEGHR-IPFDGNTFDFVF 173 (518)
Q Consensus 115 ~~~~rvLDVGcGtG~~~~~L~~~-g~~~v~gID~s~~---------~--------~--l~~~~da~~-LPf~D~SFD~V~ 173 (518)
+++.+|||||||+|..+..+.+. +..+++++|+++. + + .++.+|+.+ ++..+++||+|+
T Consensus 77 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~a~~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fD~Ii 156 (283)
T 2i7c_A 77 KEPKNVLVVGGGDGGIIRELCKYKSVENIDICEIDETVIEVSKIYFKNISCGYEDKRVNVFIEDASKFLENVTNTYDVII 156 (283)
T ss_dssp SSCCEEEEEECTTSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCTTTSGGGGSTTEEEEESCHHHHHHHCCSCEEEEE
T ss_pred CCCCeEEEEeCCcCHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHhHHhccccCCCcEEEEECChHHHHHhCCCCceEEE
Confidence 45689999999999999888765 3579999999731 1 1 245677655 333478999999
Q ss_pred EcCceeeccCCh-----HHHHHHHHhcccCCcEEEEEec
Q 010086 174 VGGARLEKASKP-----LDFASEIVRTLKPEGFAVVHVR 207 (518)
Q Consensus 174 s~~~~l~~~~dp-----~~~l~Ei~RVLKPGG~lvi~~~ 207 (518)
+.. .++...+ ..+++++.|+|||||++++...
T Consensus 157 ~d~--~~~~~~~~~l~~~~~l~~~~~~L~pgG~lv~~~~ 193 (283)
T 2i7c_A 157 VDS--SDPIGPAETLFNQNFYEKIYNALKPNGYCVAQCE 193 (283)
T ss_dssp EEC--CCTTTGGGGGSSHHHHHHHHHHEEEEEEEEEECC
T ss_pred EcC--CCCCCcchhhhHHHHHHHHHHhcCCCcEEEEECC
Confidence 954 2322111 4789999999999999999854
No 228
>2ih2_A Modification methylase TAQI; DNA, DNA methyltransferase, target base partner, 5-methylpyr 2(1H)-ONE, base flipping; HET: 5PY 6MA NEA; 1.61A {Thermus aquaticus} SCOP: c.66.1.27 d.287.1.1 PDB: 2ibs_A* 2ibt_A* 2ih4_A* 2ih5_A* 2jg3_A* 2np6_A* 2np7_A* 1aqj_A* 1aqi_A* 2adm_A* 1g38_A*
Probab=98.48 E-value=2.1e-06 Score=89.20 Aligned_cols=133 Identities=17% Similarity=0.131 Sum_probs=81.9
Q ss_pred CCCCeEEEEcCCCCHhHHHHHhc--CCCcEEEEecCCCC------CcEEeccCCCCCCCCCceeEEEEcCce--eec---
Q 010086 115 SQSAKSLCVETQYGQDVFALKEI--GVEDSIGIFKKSSK------PLVISGEGHRIPFDGNTFDFVFVGGAR--LEK--- 181 (518)
Q Consensus 115 ~~~~rvLDVGcGtG~~~~~L~~~--g~~~v~gID~s~~~------~l~~~~da~~LPf~D~SFD~V~s~~~~--l~~--- 181 (518)
.++.+|||+|||+|.++..+.+. +..+++|+|+++.. ..++++|....+ +++.||+|+++--+ ..+
T Consensus 38 ~~~~~vLD~gcGtG~~~~~~~~~~~~~~~i~gvDi~~~~~~~a~~~~~~~~D~~~~~-~~~~fD~Ii~NPPy~~~~~~~~ 116 (421)
T 2ih2_A 38 PRGGRVLEPACAHGPFLRAFREAHGTAYRFVGVEIDPKALDLPPWAEGILADFLLWE-PGEAFDLILGNPPYGIVGEASK 116 (421)
T ss_dssp CTTCEEEEETCTTCHHHHHHHHHHCSCSEEEEEESCTTTCCCCTTEEEEESCGGGCC-CSSCEEEEEECCCCCCBSCTTT
T ss_pred CCCCEEEECCCCChHHHHHHHHHhCCCCeEEEEECCHHHHHhCCCCcEEeCChhhcC-ccCCCCEEEECcCccCcccccc
Confidence 45679999999999999877763 34699999998642 224577877654 35789999995210 111
Q ss_pred ----cCCh-------------------HHHHHHHHhcccCCcEEEEEecCCCc--cCchhHhhhcc-C--ccEEEEeccC
Q 010086 182 ----ASKP-------------------LDFASEIVRTLKPEGFAVVHVRAKDE--YSFNSFLDLFN-S--CKLVKSRDID 233 (518)
Q Consensus 182 ----~~dp-------------------~~~l~Ei~RVLKPGG~lvi~~~~~~~--~s~~~~~~lf~-~--~~~v~~~~v~ 233 (518)
+.+. ..+++.+.+.|||||.+++.+...-. -+...+.+++. . ..++.+. .
T Consensus 117 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~~~~Lk~~G~~~~i~p~~~l~~~~~~~lr~~l~~~~~~~i~~l~--~ 194 (421)
T 2ih2_A 117 YPIHVFKAVKDLYKKAFSTWKGKYNLYGAFLEKAVRLLKPGGVLVFVVPATWLVLEDFALLREFLAREGKTSVYYLG--E 194 (421)
T ss_dssp CSBCCCHHHHHHHHHHCTTCCTTCCHHHHHHHHHHHHEEEEEEEEEEEEGGGGTCGGGHHHHHHHHHHSEEEEEEEE--S
T ss_pred cccccCHHHHHHHHHhhhcccCCccHHHHHHHHHHHHhCCCCEEEEEEChHHhcCccHHHHHHHHHhcCCeEEEECC--C
Confidence 1111 14688999999999999887754211 11233443322 1 2445544 3
Q ss_pred CCCCCccceeEEEEeec
Q 010086 234 GIDSSLPYIREIVLKKE 250 (518)
Q Consensus 234 ~~~~~~p~~~~vv~kK~ 250 (518)
.|...-.....++++|.
T Consensus 195 ~F~~~~~~~~il~~~k~ 211 (421)
T 2ih2_A 195 VFPQKKVSAVVIRFQKS 211 (421)
T ss_dssp CSTTCCCCEEEEEEESS
T ss_pred CCCCCCccEEEEEEEeC
Confidence 35433223344666764
No 229
>3lec_A NADB-rossmann superfamily protein; PSI, MCSG, structural genomics, midwest CENT structural genomics, protein structure initiative; 1.80A {Streptococcus agalactiae}
Probab=98.46 E-value=5.1e-07 Score=88.35 Aligned_cols=131 Identities=16% Similarity=0.143 Sum_probs=86.9
Q ss_pred CCCCCCCeEEEEcCCCCHhHHHHHhcC-CCcEEEEecCCC----------------CCcEEeccCCCCCCCCCceeEEEE
Q 010086 112 GYLSQSAKSLCVETQYGQDVFALKEIG-VEDSIGIFKKSS----------------KPLVISGEGHRIPFDGNTFDFVFV 174 (518)
Q Consensus 112 gll~~~~rvLDVGcGtG~~~~~L~~~g-~~~v~gID~s~~----------------~~l~~~~da~~LPf~D~SFD~V~s 174 (518)
.+++++.+|||||||+|..+..+++.| ...|+|+|+++. ...+..+|..+.+.+++.||+|+.
T Consensus 17 ~~v~~g~~VlDIGtGsG~l~i~la~~~~~~~V~AvDi~~~al~~A~~N~~~~gl~~~I~~~~gD~l~~~~~~~~~D~Ivi 96 (230)
T 3lec_A 17 NYVPKGARLLDVGSDHAYLPIFLLQMGYCDFAIAGEVVNGPYQSALKNVSEHGLTSKIDVRLANGLSAFEEADNIDTITI 96 (230)
T ss_dssp TTSCTTEEEEEETCSTTHHHHHHHHTTCEEEEEEEESSHHHHHHHHHHHHHTTCTTTEEEEECSGGGGCCGGGCCCEEEE
T ss_pred HhCCCCCEEEEECCchHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECchhhccccccccCEEEE
Confidence 357889999999999999999988876 458999999841 123567888877766668999887
Q ss_pred cCceeeccCChHHHHHHHHhcccCCcEEEEEecCCCccCchhHhhhccCccEEEEeccCCCCCCccceeEEEEeec
Q 010086 175 GGARLEKASKPLDFASEIVRTLKPEGFAVVHVRAKDEYSFNSFLDLFNSCKLVKSRDIDGIDSSLPYIREIVLKKE 250 (518)
Q Consensus 175 ~~~~l~~~~dp~~~l~Ei~RVLKPGG~lvi~~~~~~~~s~~~~~~lf~~~~~v~~~~v~~~~~~~p~~~~vv~kK~ 250 (518)
.+. --. --...+.+..+.|+++|.++++.... ..++..++. -.+|.++...-+.. +.+ +|..++.++.
T Consensus 97 aGm-Gg~--lI~~IL~~~~~~l~~~~~lIlqp~~~-~~~lr~~L~-~~Gf~i~~E~lv~e-~~~--~Yeii~~~~~ 164 (230)
T 3lec_A 97 CGM-GGR--LIADILNNDIDKLQHVKTLVLQPNNR-EDDLRKWLA-ANDFEIVAEDILTE-NDK--RYEILVVKHG 164 (230)
T ss_dssp EEE-CHH--HHHHHHHHTGGGGTTCCEEEEEESSC-HHHHHHHHH-HTTEEEEEEEEEEC---C--EEEEEEEEEC
T ss_pred eCC-chH--HHHHHHHHHHHHhCcCCEEEEECCCC-hHHHHHHHH-HCCCEEEEEEEEEE-CCE--EEEEEEEEeC
Confidence 653 111 13456888899999999999986432 222222222 14677777553221 112 4555666553
No 230
>2avd_A Catechol-O-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Homo sapiens} SCOP: c.66.1.1
Probab=98.46 E-value=1.2e-07 Score=90.17 Aligned_cols=87 Identities=18% Similarity=0.134 Sum_probs=64.3
Q ss_pred CCCCeEEEEcCCCCHhHHHHHhc-C-CCcEEEEecCCC----------------CCcEEeccCCCC--CCCC----Ccee
Q 010086 115 SQSAKSLCVETQYGQDVFALKEI-G-VEDSIGIFKKSS----------------KPLVISGEGHRI--PFDG----NTFD 170 (518)
Q Consensus 115 ~~~~rvLDVGcGtG~~~~~L~~~-g-~~~v~gID~s~~----------------~~l~~~~da~~L--Pf~D----~SFD 170 (518)
.++.+|||||||+|..+..+++. + ..+++++|+++. ...++.+|+.+. .+++ ++||
T Consensus 68 ~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~~~~~~~~~~~~~~D 147 (229)
T 2avd_A 68 IQAKKALDLGTFTGYSALALALALPADGRVVTCEVDAQPPELGRPLWRQAEAEHKIDLRLKPALETLDELLAAGEAGTFD 147 (229)
T ss_dssp TTCCEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCSHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHHHHHTTCTTCEE
T ss_pred cCCCEEEEEcCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHCCCCCeEEEEEcCHHHHHHHHHhcCCCCCcc
Confidence 46789999999999999888864 2 369999999751 112456665432 1222 7899
Q ss_pred EEEEcCceeeccCChHHHHHHHHhcccCCcEEEEE
Q 010086 171 FVFVGGARLEKASKPLDFASEIVRTLKPEGFAVVH 205 (518)
Q Consensus 171 ~V~s~~~~l~~~~dp~~~l~Ei~RVLKPGG~lvi~ 205 (518)
+|++... ..+...+++++.|.|||||++++.
T Consensus 148 ~v~~d~~----~~~~~~~l~~~~~~L~pgG~lv~~ 178 (229)
T 2avd_A 148 VAVVDAD----KENCSAYYERCLQLLRPGGILAVL 178 (229)
T ss_dssp EEEECSC----STTHHHHHHHHHHHEEEEEEEEEE
T ss_pred EEEECCC----HHHHHHHHHHHHHHcCCCeEEEEE
Confidence 9999653 234567899999999999999885
No 231
>2frx_A Hypothetical protein YEBU; rossmann-type S-adenosylmethionine-dependent methyltransfera domain; 2.90A {Escherichia coli}
Probab=98.45 E-value=1.6e-07 Score=101.03 Aligned_cols=91 Identities=13% Similarity=0.160 Sum_probs=67.7
Q ss_pred CCCeEEEEcCCCCHhHHHHHhc-C-CCcEEEEecCCC---------------CCcEEeccCCCCCC-CCCceeEEEEc--
Q 010086 116 QSAKSLCVETQYGQDVFALKEI-G-VEDSIGIFKKSS---------------KPLVISGEGHRIPF-DGNTFDFVFVG-- 175 (518)
Q Consensus 116 ~~~rvLDVGcGtG~~~~~L~~~-g-~~~v~gID~s~~---------------~~l~~~~da~~LPf-~D~SFD~V~s~-- 175 (518)
++.+|||+|||+|..+..+++. + ...|+|+|+++. ...++.+|+..++. .+++||.|++.
T Consensus 117 ~g~~VLDl~aGpG~kt~~lA~~~~~~g~V~avDis~~~l~~~~~n~~r~g~~nv~~~~~D~~~~~~~~~~~fD~Il~D~P 196 (479)
T 2frx_A 117 APQRVMDVAAAPGSKTTQISARMNNEGAILANEFSASRVKVLHANISRCGISNVALTHFDGRVFGAAVPEMFDAILLDAP 196 (479)
T ss_dssp CCSEEEESSCTTSHHHHHHHHHTTTCSEEEEECSSHHHHHHHHHHHHHHTCCSEEEECCCSTTHHHHSTTCEEEEEEECC
T ss_pred CCCEEEEeCCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCcEEEEeCCHHHhhhhccccCCEEEECCC
Confidence 8899999999999999888764 2 368999999841 12345788888765 67899999972
Q ss_pred --C-ceeeccCC----------------hHHHHHHHHhcccCCcEEEEEe
Q 010086 176 --G-ARLEKASK----------------PLDFASEIVRTLKPEGFAVVHV 206 (518)
Q Consensus 176 --~-~~l~~~~d----------------p~~~l~Ei~RVLKPGG~lvi~~ 206 (518)
+ ..+.+-++ ..+.+.++.|+|||||++++.+
T Consensus 197 cSg~G~~~~~pd~~~~~~~~~~~~l~~~q~~iL~~a~~~LkpGG~LvysT 246 (479)
T 2frx_A 197 CSGEGVVRKDPDALKNWSPESNQEIAATQRELIDSAFHALRPGGTLVYST 246 (479)
T ss_dssp CCCGGGGGTCTTSSSSCCHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred cCCcccccCCHHHHhhcCHhHHHHHHHHHHHHHHHHHHhcCCCCEEEEec
Confidence 1 11333222 1357899999999999998864
No 232
>3tm4_A TRNA (guanine N2-)-methyltransferase TRM14; rossmann fold, thump domain, tRNA methyltransferase; HET: SAM; 1.95A {Pyrococcus furiosus} PDB: 3tlj_A* 3tm5_A*
Probab=98.44 E-value=4e-07 Score=94.54 Aligned_cols=97 Identities=19% Similarity=0.159 Sum_probs=70.3
Q ss_pred HHHHcCCCCCCCeEEEEcCCCCHhHHHHHhcCC-CcEEEEecCCC----------------CCcEEeccCCCCCCCCCce
Q 010086 107 DLISEGYLSQSAKSLCVETQYGQDVFALKEIGV-EDSIGIFKKSS----------------KPLVISGEGHRIPFDGNTF 169 (518)
Q Consensus 107 ~L~~~gll~~~~rvLDVGcGtG~~~~~L~~~g~-~~v~gID~s~~----------------~~l~~~~da~~LPf~D~SF 169 (518)
.++... .+++.+|||+|||+|..+..++..+. .+++|+|+++. ...+.++|+.++|+++++|
T Consensus 209 ~l~~~~-~~~~~~vLD~gCGsG~~~i~~a~~~~~~~v~g~Dis~~~l~~A~~n~~~~gl~~~i~~~~~D~~~~~~~~~~f 287 (373)
T 3tm4_A 209 AMIELA-ELDGGSVLDPMCGSGTILIELALRRYSGEIIGIEKYRKHLIGAEMNALAAGVLDKIKFIQGDATQLSQYVDSV 287 (373)
T ss_dssp HHHHHH-TCCSCCEEETTCTTCHHHHHHHHTTCCSCEEEEESCHHHHHHHHHHHHHTTCGGGCEEEECCGGGGGGTCSCE
T ss_pred HHHHhh-cCCCCEEEEccCcCcHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHHcCCCCceEEEECChhhCCcccCCc
Confidence 333333 67889999999999999988887763 48999999841 2346789999999999999
Q ss_pred eEEEEcCceeec-------cCCh-HHHHHHHHhcccCCcEEEEEec
Q 010086 170 DFVFVGGARLEK-------ASKP-LDFASEIVRTLKPEGFAVVHVR 207 (518)
Q Consensus 170 D~V~s~~~~l~~-------~~dp-~~~l~Ei~RVLKPGG~lvi~~~ 207 (518)
|+|+++-- +.. +.+. ..+++++.|+| ||.+++.+.
T Consensus 288 D~Ii~npP-yg~r~~~~~~~~~ly~~~~~~l~r~l--~g~~~~i~~ 330 (373)
T 3tm4_A 288 DFAISNLP-YGLKIGKKSMIPDLYMKFFNELAKVL--EKRGVFITT 330 (373)
T ss_dssp EEEEEECC-CC------CCHHHHHHHHHHHHHHHE--EEEEEEEES
T ss_pred CEEEECCC-CCcccCcchhHHHHHHHHHHHHHHHc--CCeEEEEEC
Confidence 99999643 221 1111 46789999999 555555443
No 233
>1qam_A ERMC' methyltransferase; rRNA methyltransferase ERMC', cofactor analogs; 2.20A {Bacillus subtilis} SCOP: c.66.1.24 PDB: 1qan_A* 1qao_A* 1qaq_A* 2erc_A
Probab=98.42 E-value=1.7e-07 Score=91.64 Aligned_cols=98 Identities=9% Similarity=0.055 Sum_probs=64.4
Q ss_pred HHHHHHcCCCCCCCeEEEEcCCCCHhHHHHHhcCCCcEEEEecCCC-------------CCcEEeccCCCCCCCC-Ccee
Q 010086 105 FQDLISEGYLSQSAKSLCVETQYGQDVFALKEIGVEDSIGIFKKSS-------------KPLVISGEGHRIPFDG-NTFD 170 (518)
Q Consensus 105 ~~~L~~~gll~~~~rvLDVGcGtG~~~~~L~~~g~~~v~gID~s~~-------------~~l~~~~da~~LPf~D-~SFD 170 (518)
.+.+++...+.++.+|||||||+|..+..|.+.+ .+|+|+|+++. ...++.+|+.++|+++ ..|+
T Consensus 19 ~~~i~~~~~~~~~~~VLDiG~G~G~lt~~l~~~~-~~v~~vD~~~~~~~~a~~~~~~~~~v~~~~~D~~~~~~~~~~~~~ 97 (244)
T 1qam_A 19 IDKIMTNIRLNEHDNIFEIGSGKGHFTLELVQRC-NFVTAIEIDHKLCKTTENKLVDHDNFQVLNKDILQFKFPKNQSYK 97 (244)
T ss_dssp HHHHHTTCCCCTTCEEEEECCTTSHHHHHHHHHS-SEEEEECSCHHHHHHHHHHTTTCCSEEEECCCGGGCCCCSSCCCE
T ss_pred HHHHHHhCCCCCCCEEEEEeCCchHHHHHHHHcC-CeEEEEECCHHHHHHHHHhhccCCCeEEEEChHHhCCcccCCCeE
Confidence 3344444445678999999999999999998877 79999999741 1235789999999985 5665
Q ss_pred EEEEcCc----------eeeccCChHHHH---HH-HHhcccCCcEEEE
Q 010086 171 FVFVGGA----------RLEKASKPLDFA---SE-IVRTLKPEGFAVV 204 (518)
Q Consensus 171 ~V~s~~~----------~l~~~~dp~~~l---~E-i~RVLKPGG~lvi 204 (518)
|+++.- .++|...+..++ .| +.|+|+|||.+.+
T Consensus 98 -vv~nlPy~~~~~~l~~~l~~~~~~~~~lm~q~e~a~rll~~~G~l~v 144 (244)
T 1qam_A 98 -IFGNIPYNISTDIIRKIVFDSIADEIYLIVEYGFAKRLLNTKRSLAL 144 (244)
T ss_dssp -EEEECCGGGHHHHHHHHHHSCCCSEEEEEEEHHHHHHHTCTTSHHHH
T ss_pred -EEEeCCcccCHHHHHHHHhcCCCCeEEEEEEHHHHHHHhcCCcchhH
Confidence 444321 012222232333 34 7788888765433
No 234
>1wy7_A Hypothetical protein PH1948; seven-stranded beta sheet, methyltransferase fold, structura genomics, transferase; HET: SAH; 2.20A {Pyrococcus horikoshii} SCOP: c.66.1.32
Probab=98.42 E-value=1.8e-06 Score=80.72 Aligned_cols=87 Identities=13% Similarity=0.106 Sum_probs=66.3
Q ss_pred CCCCCeEEEEcCCCCHhHHHHHhcCCCcEEEEecCCC--------------CCcEEeccCCCCCCCCCceeEEEEcCcee
Q 010086 114 LSQSAKSLCVETQYGQDVFALKEIGVEDSIGIFKKSS--------------KPLVISGEGHRIPFDGNTFDFVFVGGARL 179 (518)
Q Consensus 114 l~~~~rvLDVGcGtG~~~~~L~~~g~~~v~gID~s~~--------------~~l~~~~da~~LPf~D~SFD~V~s~~~~l 179 (518)
..++.+|||+|||+|..+..+++.|...++|+|+++. ...++.+|+.++| ++||+|++... +
T Consensus 47 ~~~~~~vlD~g~G~G~~~~~l~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~d~~~~~---~~~D~v~~~~p-~ 122 (207)
T 1wy7_A 47 DIEGKVVADLGAGTGVLSYGALLLGAKEVICVEVDKEAVDVLIENLGEFKGKFKVFIGDVSEFN---SRVDIVIMNPP-F 122 (207)
T ss_dssp SSTTCEEEEETCTTCHHHHHHHHTTCSEEEEEESCHHHHHHHHHHTGGGTTSEEEEESCGGGCC---CCCSEEEECCC-C
T ss_pred CCCcCEEEEeeCCCCHHHHHHHHcCCCEEEEEECCHHHHHHHHHHHHHcCCCEEEEECchHHcC---CCCCEEEEcCC-C
Confidence 4567899999999999999888877668999999741 1235678888865 48999999875 5
Q ss_pred eccCC--hHHHHHHHHhcccCCcEEEEEe
Q 010086 180 EKASK--PLDFASEIVRTLKPEGFAVVHV 206 (518)
Q Consensus 180 ~~~~d--p~~~l~Ei~RVLKPGG~lvi~~ 206 (518)
++... ...+++++.|+| ||++++.+
T Consensus 123 ~~~~~~~~~~~l~~~~~~l--~~~~~~~~ 149 (207)
T 1wy7_A 123 GSQRKHADRPFLLKAFEIS--DVVYSIHL 149 (207)
T ss_dssp SSSSTTTTHHHHHHHHHHC--SEEEEEEE
T ss_pred ccccCCchHHHHHHHHHhc--CcEEEEEe
Confidence 55432 246889999999 66665553
No 235
>3m6w_A RRNA methylase; rRNA methyltransferase, 5-methylcytidine, RSMF, adoMet, MULT specific, methyltransferase, transferase; HET: CXM SAM; 1.30A {Thermus thermophilus} PDB: 3m6v_A* 3m6u_A* 3m6x_A*
Probab=98.42 E-value=1.2e-07 Score=101.78 Aligned_cols=93 Identities=16% Similarity=0.147 Sum_probs=68.5
Q ss_pred CCCCCeEEEEcCCCCHhHHHHHhc-C-CCcEEEEecCCC--------------CCcEEeccCCCCC-CCCCceeEEEE--
Q 010086 114 LSQSAKSLCVETQYGQDVFALKEI-G-VEDSIGIFKKSS--------------KPLVISGEGHRIP-FDGNTFDFVFV-- 174 (518)
Q Consensus 114 l~~~~rvLDVGcGtG~~~~~L~~~-g-~~~v~gID~s~~--------------~~l~~~~da~~LP-f~D~SFD~V~s-- 174 (518)
++++.+|||+|||+|..+..+++. + ...|+|+|+++. ...++.+|+.+++ +.+++||.|++
T Consensus 99 ~~~g~~VLDlgaGpG~kt~~LA~~~~~~g~V~AvDis~~~l~~a~~n~~r~G~~v~~~~~Da~~l~~~~~~~FD~Il~D~ 178 (464)
T 3m6w_A 99 PKPGERVLDLAAAPGGKTTHLAARMGGKGLLLANEVDGKRVRGLLENVERWGAPLAVTQAPPRALAEAFGTYFHRVLLDA 178 (464)
T ss_dssp CCTTCEEEESSCTTCHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHHCCCCEEECSCHHHHHHHHCSCEEEEEEEC
T ss_pred cCCCCEEEEEcCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCeEEEEECCHHHhhhhccccCCEEEECC
Confidence 568999999999999999888763 2 358999999841 1335678887776 45789999995
Q ss_pred --cC-ceeeccCCh----------------HHHHHHHHhcccCCcEEEEEe
Q 010086 175 --GG-ARLEKASKP----------------LDFASEIVRTLKPEGFAVVHV 206 (518)
Q Consensus 175 --~~-~~l~~~~dp----------------~~~l~Ei~RVLKPGG~lvi~~ 206 (518)
+. ..+++-++. .+.++++.|+|||||+++..+
T Consensus 179 PcSg~G~~rr~pd~~~~~~~~~~~~l~~~Q~~iL~~a~~~LkpGG~LvysT 229 (464)
T 3m6w_A 179 PCSGEGMFRKDREAARHWGPSAPKRMAEVQKALLAQASRLLGPGGVLVYST 229 (464)
T ss_dssp CCCCGGGTTTCTTSGGGCCTTHHHHHHHHHHHHHHHHHTTEEEEEEEEEEE
T ss_pred CcCCccccccChHHhhhcCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEe
Confidence 21 113322221 568899999999999998864
No 236
>2b78_A Hypothetical protein SMU.776; structure genomics, methyltransferase, caries, structural genomics, unknown function; 2.00A {Streptococcus mutans} SCOP: b.122.1.9 c.66.1.51 PDB: 3ldf_A*
Probab=98.41 E-value=2.2e-07 Score=96.96 Aligned_cols=94 Identities=9% Similarity=0.085 Sum_probs=67.7
Q ss_pred CCCCeEEEEcCCCCHhHHHHHhcCCCcEEEEecCCC-----------------CCcEEeccCCC-CCC---CCCceeEEE
Q 010086 115 SQSAKSLCVETQYGQDVFALKEIGVEDSIGIFKKSS-----------------KPLVISGEGHR-IPF---DGNTFDFVF 173 (518)
Q Consensus 115 ~~~~rvLDVGcGtG~~~~~L~~~g~~~v~gID~s~~-----------------~~l~~~~da~~-LPf---~D~SFD~V~ 173 (518)
.++.+|||+|||+|..+..+++.|...|+|+|+++. ...++++|+.+ ++. .+++||+|+
T Consensus 211 ~~~~~VLDl~cGtG~~sl~la~~ga~~V~~vD~s~~al~~A~~N~~~n~~~~~~v~~~~~D~~~~l~~~~~~~~~fD~Ii 290 (385)
T 2b78_A 211 AAGKTVLNLFSYTAAFSVAAAMGGAMATTSVDLAKRSRALSLAHFEANHLDMANHQLVVMDVFDYFKYARRHHLTYDIII 290 (385)
T ss_dssp TBTCEEEEETCTTTHHHHHHHHTTBSEEEEEESCTTHHHHHHHHHHHTTCCCTTEEEEESCHHHHHHHHHHTTCCEEEEE
T ss_pred cCCCeEEEEeeccCHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHcCCCccceEEEECCHHHHHHHHHHhCCCccEEE
Confidence 578899999999999998888777669999999852 12356777755 332 256899999
Q ss_pred EcCcee----eccCCh----HHHHHHHHhcccCCcEEEEEecC
Q 010086 174 VGGARL----EKASKP----LDFASEIVRTLKPEGFAVVHVRA 208 (518)
Q Consensus 174 s~~~~l----~~~~dp----~~~l~Ei~RVLKPGG~lvi~~~~ 208 (518)
+.--.+ .+..+. .+++.++.++|||||++++....
T Consensus 291 ~DPP~~~~~~~~~~~~~~~~~~ll~~~~~~L~pgG~l~~~~~~ 333 (385)
T 2b78_A 291 IDPPSFARNKKEVFSVSKDYHKLIRQGLEILSENGLIIASTNA 333 (385)
T ss_dssp ECCCCC-----CCCCHHHHHHHHHHHHHHTEEEEEEEEEEECC
T ss_pred ECCCCCCCChhhHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCC
Confidence 853212 233333 34567889999999999987643
No 237
>3b5i_A S-adenosyl-L-methionine:salicylic acid carboxyl methyltransferase-like protein; sabath family, indole-3-acetic acid, S-AD methionine; HET: SAH; 2.75A {Arabidopsis thaliana}
Probab=98.40 E-value=8.8e-07 Score=92.50 Aligned_cols=90 Identities=16% Similarity=0.123 Sum_probs=63.3
Q ss_pred CCeEEEEcCCCCHhHHHH--------Hh----cC----CCcEEEEecCCC---------------------------CCc
Q 010086 117 SAKSLCVETQYGQDVFAL--------KE----IG----VEDSIGIFKKSS---------------------------KPL 153 (518)
Q Consensus 117 ~~rvLDVGcGtG~~~~~L--------~~----~g----~~~v~gID~s~~---------------------------~~l 153 (518)
..+|+|+|||+|..+..+ ++ .| ...|..-|+-.. ++.
T Consensus 53 ~~~IaDlGCssG~Nt~~~v~~ii~~i~~~~~~~~~~~pe~~v~~nDLp~NDFn~lF~~L~~~~~~~~~~~~~~~~~~~~~ 132 (374)
T 3b5i_A 53 PFTAVDLGCSSGANTVHIIDFIVKHISKRFDAAGIDPPEFTAFFSDLPSNDFNTLFQLLPPLVSNTCMEECLAADGNRSY 132 (374)
T ss_dssp CEEEEEETCCSSHHHHHHHHHHHHHHHHHHHHTTCCCCCEEEEEEECTTSCHHHHHHHSCCBCCCC--CCC---CCCBCS
T ss_pred ceEEEecCCCCChhHHHHHHHHHHHHHHHHhhcCCCCCceeEEecCCCccchHHHHhhhhhhhhhcchhhhccccCCCce
Confidence 478999999999887554 11 11 235666665311 112
Q ss_pred EE---eccCCCCCCCCCceeEEEEcCceeeccCChH--------------------------------------HHHHHH
Q 010086 154 VI---SGEGHRIPFDGNTFDFVFVGGARLEKASKPL--------------------------------------DFASEI 192 (518)
Q Consensus 154 ~~---~~da~~LPf~D~SFD~V~s~~~~l~~~~dp~--------------------------------------~~l~Ei 192 (518)
++ -+......||++|||+|+|+.+ |||+++.. .+++..
T Consensus 133 f~~gvpgSFy~rlfP~~S~d~v~Ss~a-LHWls~~p~~l~~~~~~~~nkg~i~~~~~~~~v~~ay~~Qf~~D~~~fL~~r 211 (374)
T 3b5i_A 133 FVAGVPGSFYRRLFPARTIDFFHSAFS-LHWLSQVPESVTDRRSAAYNRGRVFIHGAGEKTTTAYKRQFQADLAEFLRAR 211 (374)
T ss_dssp EEEEEESCTTSCCSCTTCEEEEEEESC-TTBCSSCCGGGGCTTSTTCCTTTSSSSSCCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEecChhhhcccCCCcceEEEEecce-eeeeccCchhhhccccccccCCceEeCCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 22 2344556899999999999998 99987422 257788
Q ss_pred HhcccCCcEEEEEec
Q 010086 193 VRTLKPEGFAVVHVR 207 (518)
Q Consensus 193 ~RVLKPGG~lvi~~~ 207 (518)
+|.|||||++++.+.
T Consensus 212 a~eL~pGG~mvl~~~ 226 (374)
T 3b5i_A 212 AAEVKRGGAMFLVCL 226 (374)
T ss_dssp HHHEEEEEEEEEEEE
T ss_pred HHHhCCCCEEEEEEe
Confidence 999999999999864
No 238
>3c3y_A Pfomt, O-methyltransferase; plant secondary metabolism; HET: SAH; 1.37A {Mesembryanthemum crystallinum}
Probab=98.39 E-value=3e-07 Score=89.15 Aligned_cols=87 Identities=14% Similarity=0.165 Sum_probs=64.9
Q ss_pred CCCCeEEEEcCCCCHhHHHHHhc-C-CCcEEEEecCCC----------------CCcEEeccCCCC-C-C-----CCCce
Q 010086 115 SQSAKSLCVETQYGQDVFALKEI-G-VEDSIGIFKKSS----------------KPLVISGEGHRI-P-F-----DGNTF 169 (518)
Q Consensus 115 ~~~~rvLDVGcGtG~~~~~L~~~-g-~~~v~gID~s~~----------------~~l~~~~da~~L-P-f-----~D~SF 169 (518)
.++.+|||||||+|..+..+++. + ..+++++|+++. ...++.+|+.+. | + ++++|
T Consensus 69 ~~~~~VLeiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gda~~~l~~l~~~~~~~~~f 148 (237)
T 3c3y_A 69 VNAKKTIEVGVFTGYSLLLTALSIPDDGKITAIDFDREAYEIGLPFIRKAGVEHKINFIESDAMLALDNLLQGQESEGSY 148 (237)
T ss_dssp TTCCEEEEECCTTSHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHSTTCTTCE
T ss_pred hCCCEEEEeCCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHHhccCCCCCc
Confidence 35679999999999999888764 2 379999999741 112456776543 3 2 36899
Q ss_pred eEEEEcCceeeccCChHHHHHHHHhcccCCcEEEEE
Q 010086 170 DFVFVGGARLEKASKPLDFASEIVRTLKPEGFAVVH 205 (518)
Q Consensus 170 D~V~s~~~~l~~~~dp~~~l~Ei~RVLKPGG~lvi~ 205 (518)
|+|++... - .+...+++++.|.|||||++++.
T Consensus 149 D~I~~d~~-~---~~~~~~l~~~~~~L~pGG~lv~d 180 (237)
T 3c3y_A 149 DFGFVDAD-K---PNYIKYHERLMKLVKVGGIVAYD 180 (237)
T ss_dssp EEEEECSC-G---GGHHHHHHHHHHHEEEEEEEEEE
T ss_pred CEEEECCc-h---HHHHHHHHHHHHhcCCCeEEEEe
Confidence 99998653 1 24567899999999999999886
No 239
>4dmg_A Putative uncharacterized protein TTHA1493; rRNA, methyltransferase, S-adenosyl-methionine, 23S ribosoma transferase; HET: SAM; 1.70A {Thermus thermophilus}
Probab=98.39 E-value=3.8e-07 Score=95.76 Aligned_cols=93 Identities=19% Similarity=0.200 Sum_probs=66.4
Q ss_pred CCCCCCeEEEEcCCCCHhHHHHHhcCCCcEEEEecCCC--------------CCcEEeccCCCC-CCCCCceeEEEEcCc
Q 010086 113 YLSQSAKSLCVETQYGQDVFALKEIGVEDSIGIFKKSS--------------KPLVISGEGHRI-PFDGNTFDFVFVGGA 177 (518)
Q Consensus 113 ll~~~~rvLDVGcGtG~~~~~L~~~g~~~v~gID~s~~--------------~~l~~~~da~~L-Pf~D~SFD~V~s~~~ 177 (518)
++++|.+|||+|||||..+..+++.|. .|+|+|+|+. ...+.++|+.+. +..++.||+|++.--
T Consensus 211 ~~~~g~~VLDlg~GtG~~sl~~a~~ga-~V~avDis~~al~~a~~n~~~ng~~~~~~~~D~~~~l~~~~~~fD~Ii~dpP 289 (393)
T 4dmg_A 211 MVRPGERVLDVYSYVGGFALRAARKGA-YALAVDKDLEALGVLDQAALRLGLRVDIRHGEALPTLRGLEGPFHHVLLDPP 289 (393)
T ss_dssp TCCTTCEEEEESCTTTHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHTCCCEEEESCHHHHHHTCCCCEEEEEECCC
T ss_pred HhcCCCeEEEcccchhHHHHHHHHcCC-eEEEEECCHHHHHHHHHHHHHhCCCCcEEEccHHHHHHHhcCCCCEEEECCC
Confidence 356799999999999999988888774 4999999841 123456777653 222344999998642
Q ss_pred eeec--------cCChHHHHHHHHhcccCCcEEEEEe
Q 010086 178 RLEK--------ASKPLDFASEIVRTLKPEGFAVVHV 206 (518)
Q Consensus 178 ~l~~--------~~dp~~~l~Ei~RVLKPGG~lvi~~ 206 (518)
+|.. ..+..+++.++.|+|||||++++.+
T Consensus 290 ~f~~~~~~~~~~~~~~~~ll~~a~~~LkpGG~Lv~~s 326 (393)
T 4dmg_A 290 TLVKRPEELPAMKRHLVDLVREALRLLAEEGFLWLSS 326 (393)
T ss_dssp CCCSSGGGHHHHHHHHHHHHHHHHHTEEEEEEEEEEE
T ss_pred cCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEE
Confidence 1221 1123467899999999999998654
No 240
>3gnl_A Uncharacterized protein, DUF633, LMOF2365_1472; structural genomics, PSI-2, protein structure initiative; 1.50A {Listeria monocytogenes str}
Probab=98.39 E-value=3.7e-07 Score=90.06 Aligned_cols=114 Identities=9% Similarity=0.030 Sum_probs=78.9
Q ss_pred CCCCCCCeEEEEcCCCCHhHHHHHhcC-CCcEEEEecCCC----------------CCcEEeccCCCCCCCCCceeEEEE
Q 010086 112 GYLSQSAKSLCVETQYGQDVFALKEIG-VEDSIGIFKKSS----------------KPLVISGEGHRIPFDGNTFDFVFV 174 (518)
Q Consensus 112 gll~~~~rvLDVGcGtG~~~~~L~~~g-~~~v~gID~s~~----------------~~l~~~~da~~LPf~D~SFD~V~s 174 (518)
.+++++.+|||||||+|..+..|++.+ ...|+|+|+++. ...+..+|..+.+.+++.||+|++
T Consensus 17 ~~v~~g~~VlDIGtGsG~l~i~la~~~~~~~V~avDi~~~al~~A~~N~~~~gl~~~I~v~~gD~l~~~~~~~~~D~Ivi 96 (244)
T 3gnl_A 17 SYITKNERIADIGSDHAYLPCFAVKNQTASFAIAGEVVDGPFQSAQKQVRSSGLTEQIDVRKGNGLAVIEKKDAIDTIVI 96 (244)
T ss_dssp TTCCSSEEEEEETCSTTHHHHHHHHTTSEEEEEEEESSHHHHHHHHHHHHHTTCTTTEEEEECSGGGGCCGGGCCCEEEE
T ss_pred HhCCCCCEEEEECCccHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEEecchhhccCccccccEEEE
Confidence 357889999999999999999998876 358999999841 123567888776665557999987
Q ss_pred cCceeeccCChHHHHHHHHhcccCCcEEEEEecCCCccCchhHhhhccCccEEEEe
Q 010086 175 GGARLEKASKPLDFASEIVRTLKPEGFAVVHVRAKDEYSFNSFLDLFNSCKLVKSR 230 (518)
Q Consensus 175 ~~~~l~~~~dp~~~l~Ei~RVLKPGG~lvi~~~~~~~~s~~~~~~lf~~~~~v~~~ 230 (518)
.+. --. --...+.+..+.|+++|.++++-.. ...+...++.- .+|.++...
T Consensus 97 agm-Gg~--lI~~IL~~~~~~L~~~~~lIlq~~~-~~~~lr~~L~~-~Gf~i~~E~ 147 (244)
T 3gnl_A 97 AGM-GGT--LIRTILEEGAAKLAGVTKLILQPNI-AAWQLREWSEQ-NNWLITSEA 147 (244)
T ss_dssp EEE-CHH--HHHHHHHHTGGGGTTCCEEEEEESS-CHHHHHHHHHH-HTEEEEEEE
T ss_pred eCC-chH--HHHHHHHHHHHHhCCCCEEEEEcCC-ChHHHHHHHHH-CCCEEEEEE
Confidence 653 111 1245688899999999999998643 22222222221 457765544
No 241
>2as0_A Hypothetical protein PH1915; RNA methyltransferase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus horikoshii} SCOP: b.122.1.9 c.66.1.51
Probab=98.36 E-value=8.4e-08 Score=100.14 Aligned_cols=94 Identities=19% Similarity=0.180 Sum_probs=69.3
Q ss_pred CCCCCeEEEEcCCCCHhHHHHHhcCCCcEEEEecCCC----------------CCcEEeccCCCCCC----CCCceeEEE
Q 010086 114 LSQSAKSLCVETQYGQDVFALKEIGVEDSIGIFKKSS----------------KPLVISGEGHRIPF----DGNTFDFVF 173 (518)
Q Consensus 114 l~~~~rvLDVGcGtG~~~~~L~~~g~~~v~gID~s~~----------------~~l~~~~da~~LPf----~D~SFD~V~ 173 (518)
.+++.+|||+|||+|..+..+++.|..+|+|+|+++. ...++.+|+.+++. ++++||+|+
T Consensus 215 ~~~~~~VLDl~~G~G~~~~~la~~g~~~v~~vD~s~~~l~~a~~n~~~n~~~~~v~~~~~d~~~~~~~~~~~~~~fD~Vi 294 (396)
T 2as0_A 215 VQPGDRVLDVFTYTGGFAIHAAIAGADEVIGIDKSPRAIETAKENAKLNGVEDRMKFIVGSAFEEMEKLQKKGEKFDIVV 294 (396)
T ss_dssp CCTTCEEEETTCTTTHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHTTCCEEEEE
T ss_pred hhCCCeEEEecCCCCHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHcCCCccceEEECCHHHHHHHHHhhCCCCCEEE
Confidence 3578999999999999998888877679999999741 12346777765422 367999999
Q ss_pred EcCcee--------eccCChHHHHHHHHhcccCCcEEEEEec
Q 010086 174 VGGARL--------EKASKPLDFASEIVRTLKPEGFAVVHVR 207 (518)
Q Consensus 174 s~~~~l--------~~~~dp~~~l~Ei~RVLKPGG~lvi~~~ 207 (518)
+.--.+ ++..+...++.++.++|||||++++...
T Consensus 295 ~dpP~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~~~~ 336 (396)
T 2as0_A 295 LDPPAFVQHEKDLKAGLRAYFNVNFAGLNLVKDGGILVTCSC 336 (396)
T ss_dssp ECCCCSCSSGGGHHHHHHHHHHHHHHHHTTEEEEEEEEEEEC
T ss_pred ECCCCCCCCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEEC
Confidence 953211 1113345788999999999999888754
No 242
>3kr9_A SAM-dependent methyltransferase; class I rossmann-like methyltransferase fold; 2.00A {Streptococcus pneumoniae} PDB: 3ku1_A*
Probab=98.36 E-value=1.1e-06 Score=85.65 Aligned_cols=113 Identities=17% Similarity=0.140 Sum_probs=75.8
Q ss_pred CCCCCCCeEEEEcCCCCHhHHHHHhcC-CCcEEEEecCCC----------------CCcEEeccCCCCCCCCC-ceeEEE
Q 010086 112 GYLSQSAKSLCVETQYGQDVFALKEIG-VEDSIGIFKKSS----------------KPLVISGEGHRIPFDGN-TFDFVF 173 (518)
Q Consensus 112 gll~~~~rvLDVGcGtG~~~~~L~~~g-~~~v~gID~s~~----------------~~l~~~~da~~LPf~D~-SFD~V~ 173 (518)
.+++++.+|||||||+|..+..+++.+ ...|+|+|+++. ...+..+|..+ +++.+ .||+|+
T Consensus 11 ~~v~~g~~VlDIGtGsG~l~i~la~~~~~~~V~avDi~~~al~~A~~N~~~~gl~~~i~~~~~d~l~-~l~~~~~~D~Iv 89 (225)
T 3kr9_A 11 SFVSQGAILLDVGSDHAYLPIELVERGQIKSAIAGEVVEGPYQSAVKNVEAHGLKEKIQVRLANGLA-AFEETDQVSVIT 89 (225)
T ss_dssp TTSCTTEEEEEETCSTTHHHHHHHHTTSEEEEEEEESSHHHHHHHHHHHHHTTCTTTEEEEECSGGG-GCCGGGCCCEEE
T ss_pred HhCCCCCEEEEeCCCcHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEEECchhh-hcccCcCCCEEE
Confidence 357889999999999999999888876 358999999841 12345677632 33433 699998
Q ss_pred EcCceeeccCChHHHHHHHHhcccCCcEEEEEecCCCccCchhHhhhccCccEEEEe
Q 010086 174 VGGARLEKASKPLDFASEIVRTLKPEGFAVVHVRAKDEYSFNSFLDLFNSCKLVKSR 230 (518)
Q Consensus 174 s~~~~l~~~~dp~~~l~Ei~RVLKPGG~lvi~~~~~~~~s~~~~~~lf~~~~~v~~~ 230 (518)
..+. --. --...+.+..+.|+|+|+++++-.. ...+...++. -..|.++...
T Consensus 90 iaG~-Gg~--~i~~Il~~~~~~L~~~~~lVlq~~~-~~~~vr~~L~-~~Gf~i~~e~ 141 (225)
T 3kr9_A 90 IAGM-GGR--LIARILEEGLGKLANVERLILQPNN-REDDLRIWLQ-DHGFQIVAES 141 (225)
T ss_dssp EEEE-CHH--HHHHHHHHTGGGCTTCCEEEEEESS-CHHHHHHHHH-HTTEEEEEEE
T ss_pred EcCC-ChH--HHHHHHHHHHHHhCCCCEEEEECCC-CHHHHHHHHH-HCCCEEEEEE
Confidence 7653 111 1346788999999999999997543 2222222221 1457776654
No 243
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=98.35 E-value=2.9e-07 Score=103.48 Aligned_cols=93 Identities=12% Similarity=0.175 Sum_probs=70.8
Q ss_pred CCCeEEEEcCCCCHhHHHHHhcCCCcEEEEecCCC-----------------CCcEEeccCCC-CCCCCCceeEEEEcCc
Q 010086 116 QSAKSLCVETQYGQDVFALKEIGVEDSIGIFKKSS-----------------KPLVISGEGHR-IPFDGNTFDFVFVGGA 177 (518)
Q Consensus 116 ~~~rvLDVGcGtG~~~~~L~~~g~~~v~gID~s~~-----------------~~l~~~~da~~-LPf~D~SFD~V~s~~~ 177 (518)
++.+|||+|||||..+..++..|..+|+++|+|+. ...++++|+.+ ++..+++||+|++.--
T Consensus 539 ~g~~VLDlg~GtG~~sl~aa~~ga~~V~aVD~s~~al~~a~~N~~~ngl~~~~v~~i~~D~~~~l~~~~~~fD~Ii~DPP 618 (703)
T 3v97_A 539 KGKDFLNLFSYTGSATVHAGLGGARSTTTVDMSRTYLEWAERNLRLNGLTGRAHRLIQADCLAWLREANEQFDLIFIDPP 618 (703)
T ss_dssp TTCEEEEESCTTCHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHTTCCSTTEEEEESCHHHHHHHCCCCEEEEEECCC
T ss_pred CCCcEEEeeechhHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHcCCCccceEEEecCHHHHHHhcCCCccEEEECCc
Confidence 68899999999999998887777667999999841 12356788766 4666789999998541
Q ss_pred e----------eeccCChHHHHHHHHhcccCCcEEEEEecC
Q 010086 178 R----------LEKASKPLDFASEIVRTLKPEGFAVVHVRA 208 (518)
Q Consensus 178 ~----------l~~~~dp~~~l~Ei~RVLKPGG~lvi~~~~ 208 (518)
+ ++...+..+.+.++.|+|||||++++....
T Consensus 619 ~f~~~~~~~~~~~~~~~~~~ll~~a~~~LkpgG~L~~s~~~ 659 (703)
T 3v97_A 619 TFSNSKRMEDAFDVQRDHLALMKDLKRLLRAGGTIMFSNNK 659 (703)
T ss_dssp SBC-------CCBHHHHHHHHHHHHHHHEEEEEEEEEEECC
T ss_pred cccCCccchhHHHHHHHHHHHHHHHHHhcCCCcEEEEEECC
Confidence 1 222334456789999999999999987654
No 244
>2f8l_A Hypothetical protein LMO1582; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE SAM; 2.20A {Listeria monocytogenes} SCOP: c.66.1.45
Probab=98.34 E-value=1.2e-06 Score=89.45 Aligned_cols=91 Identities=13% Similarity=0.070 Sum_probs=67.0
Q ss_pred CCCCeEEEEcCCCCHhHHHHHhcC-C-----CcEEEEecCCC--------------CCcEEeccCCCCCCCCCceeEEEE
Q 010086 115 SQSAKSLCVETQYGQDVFALKEIG-V-----EDSIGIFKKSS--------------KPLVISGEGHRIPFDGNTFDFVFV 174 (518)
Q Consensus 115 ~~~~rvLDVGcGtG~~~~~L~~~g-~-----~~v~gID~s~~--------------~~l~~~~da~~LPf~D~SFD~V~s 174 (518)
.++.+|||+|||+|.++..+.+.. . ..++|+|+++. ...+..+|... +.+++.||+|++
T Consensus 129 ~~~~~VlDp~cGsG~~l~~~~~~~~~~~~~~~~v~GiDi~~~~~~~a~~n~~~~g~~~~i~~~D~l~-~~~~~~fD~Ii~ 207 (344)
T 2f8l_A 129 KKNVSILDPACGTANLLTTVINQLELKGDVDVHASGVDVDDLLISLALVGADLQRQKMTLLHQDGLA-NLLVDPVDVVIS 207 (344)
T ss_dssp CSEEEEEETTCTTSHHHHHHHHHHHTTSSCEEEEEEEESCHHHHHHHHHHHHHHTCCCEEEESCTTS-CCCCCCEEEEEE
T ss_pred CCCCEEEeCCCCccHHHHHHHHHHHHhcCCCceEEEEECCHHHHHHHHHHHHhCCCCceEEECCCCC-ccccCCccEEEE
Confidence 356799999999999987665432 1 57999999742 23356777655 446789999999
Q ss_pred cCceeeccCChH------------------HHHHHHHhcccCCcEEEEEec
Q 010086 175 GGARLEKASKPL------------------DFASEIVRTLKPEGFAVVHVR 207 (518)
Q Consensus 175 ~~~~l~~~~dp~------------------~~l~Ei~RVLKPGG~lvi~~~ 207 (518)
+-- |.+.+... .+++++.+.|||||++++.+.
T Consensus 208 NPP-fg~~~~~~~~~~~~~~~~~g~~~~~~~~l~~~~~~Lk~gG~~~~v~p 257 (344)
T 2f8l_A 208 DLP-VGYYPDDENAKTFELCREEGHSFAHFLFIEQGMRYTKPGGYLFFLVP 257 (344)
T ss_dssp ECC-CSEESCHHHHTTSTTCCSSSCEEHHHHHHHHHHHTEEEEEEEEEEEE
T ss_pred CCC-CCCcCchhhhhhccccCCCCcchHHHHHHHHHHHHhCCCCEEEEEEC
Confidence 865 54443221 478999999999999988774
No 245
>2jjq_A Uncharacterized RNA methyltransferase pyrab10780; metal-binding, tRNA methyltransferase, S-adenosyl-L-methionine, iron, 4Fe-4S, iron-sulfur; HET: SAH; 1.8A {Pyrococcus abyssi} PDB: 2vs1_A*
Probab=98.33 E-value=3e-06 Score=89.80 Aligned_cols=114 Identities=13% Similarity=0.110 Sum_probs=78.8
Q ss_pred CCCCCeEEEEcCCCCHhHHHHHhcCCCcEEEEecCCC--------------CCcEEeccCCCCCCCCCceeEEEEcCcee
Q 010086 114 LSQSAKSLCVETQYGQDVFALKEIGVEDSIGIFKKSS--------------KPLVISGEGHRIPFDGNTFDFVFVGGARL 179 (518)
Q Consensus 114 l~~~~rvLDVGcGtG~~~~~L~~~g~~~v~gID~s~~--------------~~l~~~~da~~LPf~D~SFD~V~s~~~~l 179 (518)
+.++.+|||+|||+|.++..|++.+ .+|+|+|+++. ...++.+|+.+++.. +||+|++.-- .
T Consensus 288 ~~~~~~VLDlgcG~G~~sl~la~~~-~~V~gvD~s~~ai~~A~~n~~~ngl~v~~~~~d~~~~~~~--~fD~Vv~dPP-r 363 (425)
T 2jjq_A 288 LVEGEKILDMYSGVGTFGIYLAKRG-FNVKGFDSNEFAIEMARRNVEINNVDAEFEVASDREVSVK--GFDTVIVDPP-R 363 (425)
T ss_dssp HCCSSEEEEETCTTTHHHHHHHHTT-CEEEEEESCHHHHHHHHHHHHHHTCCEEEEECCTTTCCCT--TCSEEEECCC-T
T ss_pred cCCCCEEEEeeccchHHHHHHHHcC-CEEEEEECCHHHHHHHHHHHHHcCCcEEEEECChHHcCcc--CCCEEEEcCC-c
Confidence 4678899999999999999888775 69999999841 123568888887532 8999998542 1
Q ss_pred eccCChHHHHHHHHhcccCCcEEEEEecCCCccCchhHhhhccCccEEEEeccCCCCCC
Q 010086 180 EKASKPLDFASEIVRTLKPEGFAVVHVRAKDEYSFNSFLDLFNSCKLVKSRDIDGIDSS 238 (518)
Q Consensus 180 ~~~~dp~~~l~Ei~RVLKPGG~lvi~~~~~~~~s~~~~~~lf~~~~~v~~~~v~~~~~~ 238 (518)
.. -...+++.+ +.|||||++++..... +. ...+.. +. |++..+.-+|.|-.+
T Consensus 364 ~g--~~~~~~~~l-~~l~p~givyvsc~p~-tl-arDl~~-l~-y~l~~~~~~DmFP~T 415 (425)
T 2jjq_A 364 AG--LHPRLVKRL-NREKPGVIVYVSCNPE-TF-ARDVKM-LD-YRIDEIVALDMFPHT 415 (425)
T ss_dssp TC--SCHHHHHHH-HHHCCSEEEEEESCHH-HH-HHHHHH-SS-CCEEEEEEECCSTTS
T ss_pred cc--hHHHHHHHH-HhcCCCcEEEEECChH-HH-HhHHhh-Ce-EEEEEEEEECcCCCC
Confidence 11 112355555 4599999999875321 11 122333 34 999999998886554
No 246
>1uwv_A 23S rRNA (uracil-5-)-methyltransferase RUMA; RNA modification, iron-sulfur cluster, RNA processing; 1.95A {Escherichia coli} SCOP: b.40.4.12 c.66.1.40 PDB: 2bh2_A*
Probab=98.29 E-value=1.7e-06 Score=91.60 Aligned_cols=117 Identities=14% Similarity=0.153 Sum_probs=79.6
Q ss_pred CCCCCeEEEEcCCCCHhHHHHHhcCCCcEEEEecCCC---------------CCcEEeccCCC----CCCCCCceeEEEE
Q 010086 114 LSQSAKSLCVETQYGQDVFALKEIGVEDSIGIFKKSS---------------KPLVISGEGHR----IPFDGNTFDFVFV 174 (518)
Q Consensus 114 l~~~~rvLDVGcGtG~~~~~L~~~g~~~v~gID~s~~---------------~~l~~~~da~~----LPf~D~SFD~V~s 174 (518)
+.++.+|||+|||+|..+..|++.+ .+|+|+|+++. ...++.+|+.+ +|+++++||+|++
T Consensus 284 ~~~~~~VLDlgcG~G~~~~~la~~~-~~V~gvD~s~~al~~A~~n~~~~~~~~v~f~~~d~~~~l~~~~~~~~~fD~Vv~ 362 (433)
T 1uwv_A 284 VQPEDRVLDLFCGMGNFTLPLATQA-ASVVGVEGVPALVEKGQQNARLNGLQNVTFYHENLEEDVTKQPWAKNGFDKVLL 362 (433)
T ss_dssp CCTTCEEEEESCTTTTTHHHHHTTS-SEEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCTTSCCSSSGGGTTCCSEEEE
T ss_pred CCCCCEEEECCCCCCHHHHHHHhhC-CEEEEEeCCHHHHHHHHHHHHHcCCCceEEEECCHHHHhhhhhhhcCCCCEEEE
Confidence 4677899999999999999998774 79999999841 12356788876 5678899999998
Q ss_pred cCceeeccCChHHHHHHHHhcccCCcEEEEEecCCCccCchhHhhhc-cCccEEEEeccCCCCCC
Q 010086 175 GGARLEKASKPLDFASEIVRTLKPEGFAVVHVRAKDEYSFNSFLDLF-NSCKLVKSRDIDGIDSS 238 (518)
Q Consensus 175 ~~~~l~~~~dp~~~l~Ei~RVLKPGG~lvi~~~~~~~~s~~~~~~lf-~~~~~v~~~~v~~~~~~ 238 (518)
.-- ... ...+++.+. -++|++++++....... ......+. ..|++..+.-++.|-.+
T Consensus 363 dPP-r~g---~~~~~~~l~-~~~p~~ivyvsc~p~tl--ard~~~l~~~Gy~~~~~~~~d~Fp~t 420 (433)
T 1uwv_A 363 DPA-RAG---AAGVMQQII-KLEPIRIVYVSCNPATL--ARDSEALLKAGYTIARLAMLDMFPHT 420 (433)
T ss_dssp CCC-TTC---CHHHHHHHH-HHCCSEEEEEESCHHHH--HHHHHHHHHTTCEEEEEEEECCSTTS
T ss_pred CCC-Ccc---HHHHHHHHH-hcCCCeEEEEECChHHH--HhhHHHHHHCCcEEEEEEEeccCCCC
Confidence 542 111 123444444 37999998886532111 12222233 46999998888876543
No 247
>2h1r_A Dimethyladenosine transferase, putative; SGC toronto dimethyladenosine transferase, structural genomics, structural genomics consortium; 1.89A {Plasmodium falciparum}
Probab=98.29 E-value=9e-07 Score=89.23 Aligned_cols=62 Identities=19% Similarity=0.162 Sum_probs=46.4
Q ss_pred CCCCCCeEEEEcCCCCHhHHHHHhcCCCcEEEEecCCC---------------CCcEEeccCCCCCCCCCceeEEEEcCc
Q 010086 113 YLSQSAKSLCVETQYGQDVFALKEIGVEDSIGIFKKSS---------------KPLVISGEGHRIPFDGNTFDFVFVGGA 177 (518)
Q Consensus 113 ll~~~~rvLDVGcGtG~~~~~L~~~g~~~v~gID~s~~---------------~~l~~~~da~~LPf~D~SFD~V~s~~~ 177 (518)
.+.++.+|||||||+|..+..|++.+ .+|+|+|+++. ...++.+|+.++|++ +||.|++...
T Consensus 39 ~~~~~~~VLDiG~G~G~lt~~La~~~-~~v~~vDi~~~~~~~a~~~~~~~~~~~v~~~~~D~~~~~~~--~~D~Vv~n~p 115 (299)
T 2h1r_A 39 KIKSSDIVLEIGCGTGNLTVKLLPLA-KKVITIDIDSRMISEVKKRCLYEGYNNLEVYEGDAIKTVFP--KFDVCTANIP 115 (299)
T ss_dssp CCCTTCEEEEECCTTSTTHHHHTTTS-SEEEEECSCHHHHHHHHHHHHHTTCCCEEC----CCSSCCC--CCSEEEEECC
T ss_pred CCCCcCEEEEEcCcCcHHHHHHHhcC-CEEEEEECCHHHHHHHHHHHHHcCCCceEEEECchhhCCcc--cCCEEEEcCC
Confidence 35788999999999999999998775 69999999741 122457888888775 8999999753
No 248
>3k6r_A Putative transferase PH0793; structural genomics, PSI structure initiative, midwest center for structural genomic unknown function; 2.10A {Pyrococcus horikoshii} PDB: 3a25_A* 3a26_A*
Probab=98.29 E-value=1.2e-06 Score=88.03 Aligned_cols=86 Identities=14% Similarity=0.164 Sum_probs=67.9
Q ss_pred CCCCCeEEEEcCCCCHhHHHHHhcCCCcEEEEecCCC----------------CCcEEeccCCCCCCCCCceeEEEEcCc
Q 010086 114 LSQSAKSLCVETQYGQDVFALKEIGVEDSIGIFKKSS----------------KPLVISGEGHRIPFDGNTFDFVFVGGA 177 (518)
Q Consensus 114 l~~~~rvLDVGcGtG~~~~~L~~~g~~~v~gID~s~~----------------~~l~~~~da~~LPf~D~SFD~V~s~~~ 177 (518)
+++|.+|||+|||+|.++..++..|..+|+++|+++. ...+.++|+.+++ +.+.||.|++..
T Consensus 123 ~~~g~~VlD~~aG~G~~~i~~a~~g~~~V~avD~np~a~~~~~~N~~~N~v~~~v~~~~~D~~~~~-~~~~~D~Vi~~~- 200 (278)
T 3k6r_A 123 AKPDELVVDMFAGIGHLSLPIAVYGKAKVIAIEKDPYTFKFLVENIHLNKVEDRMSAYNMDNRDFP-GENIADRILMGY- 200 (278)
T ss_dssp CCTTCEEEETTCTTTTTTHHHHHHTCCEEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCTTTCC-CCSCEEEEEECC-
T ss_pred cCCCCEEEEecCcCcHHHHHHHHhcCCeEEEEECCHHHHHHHHHHHHHcCCCCcEEEEeCcHHHhc-cccCCCEEEECC-
Confidence 6789999999999999998777777679999999841 1234678988875 367899999864
Q ss_pred eeeccCChHHHHHHHHhcccCCcEEEEE
Q 010086 178 RLEKASKPLDFASEIVRTLKPEGFAVVH 205 (518)
Q Consensus 178 ~l~~~~dp~~~l~Ei~RVLKPGG~lvi~ 205 (518)
. .....++.++.+.|||||++.+.
T Consensus 201 -p---~~~~~~l~~a~~~lk~gG~ih~~ 224 (278)
T 3k6r_A 201 -V---VRTHEFIPKALSIAKDGAIIHYH 224 (278)
T ss_dssp -C---SSGGGGHHHHHHHEEEEEEEEEE
T ss_pred -C---CcHHHHHHHHHHHcCCCCEEEEE
Confidence 2 23456788999999999998664
No 249
>2yx1_A Hypothetical protein MJ0883; methyl transferase, tRNA modification enzyme, transferase; HET: SFG; 2.20A {Methanocaldococcus jannaschii} PDB: 2zzn_A* 3ay0_A* 2zzm_A*
Probab=98.29 E-value=1.3e-06 Score=89.35 Aligned_cols=83 Identities=11% Similarity=0.019 Sum_probs=65.2
Q ss_pred CCCCCeEEEEcCCCCHhHHHHHhcCCCcEEEEecCCC----------------CCcEEeccCCCCCCCCCceeEEEEcCc
Q 010086 114 LSQSAKSLCVETQYGQDVFALKEIGVEDSIGIFKKSS----------------KPLVISGEGHRIPFDGNTFDFVFVGGA 177 (518)
Q Consensus 114 l~~~~rvLDVGcGtG~~~~~L~~~g~~~v~gID~s~~----------------~~l~~~~da~~LPf~D~SFD~V~s~~~ 177 (518)
+.++.+|||+|||+|..+.. ++ +...|+|+|+++. ...++.+|+.+.+ ++||+|++..-
T Consensus 193 ~~~~~~VLDlg~G~G~~~l~-a~-~~~~V~~vD~s~~ai~~a~~n~~~n~l~~~v~~~~~D~~~~~---~~fD~Vi~dpP 267 (336)
T 2yx1_A 193 VSLNDVVVDMFAGVGPFSIA-CK-NAKKIYAIDINPHAIELLKKNIKLNKLEHKIIPILSDVREVD---VKGNRVIMNLP 267 (336)
T ss_dssp CCTTCEEEETTCTTSHHHHH-TT-TSSEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCGGGCC---CCEEEEEECCT
T ss_pred cCCCCEEEEccCccCHHHHh-cc-CCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECChHHhc---CCCcEEEECCc
Confidence 46789999999999999987 66 5579999999741 1235678888766 89999999631
Q ss_pred eeeccCChHHHHHHHHhcccCCcEEEEEe
Q 010086 178 RLEKASKPLDFASEIVRTLKPEGFAVVHV 206 (518)
Q Consensus 178 ~l~~~~dp~~~l~Ei~RVLKPGG~lvi~~ 206 (518)
. ....++.++.++|||||++++..
T Consensus 268 --~---~~~~~l~~~~~~L~~gG~l~~~~ 291 (336)
T 2yx1_A 268 --K---FAHKFIDKALDIVEEGGVIHYYT 291 (336)
T ss_dssp --T---TGGGGHHHHHHHEEEEEEEEEEE
T ss_pred --H---hHHHHHHHHHHHcCCCCEEEEEE
Confidence 1 13478999999999999988863
No 250
>2efj_A 3,7-dimethylxanthine methyltransferase; SAM-dependant methyltransferase, SAH, theobromine; HET: SAH 37T; 2.00A {Coffea canephora} PDB: 2eg5_A*
Probab=98.28 E-value=1.8e-06 Score=90.37 Aligned_cols=91 Identities=11% Similarity=-0.081 Sum_probs=62.0
Q ss_pred CCeEEEEcCCCCHhHHHHHhc------------------CCCcEEEEecCC------------------------CCCcE
Q 010086 117 SAKSLCVETQYGQDVFALKEI------------------GVEDSIGIFKKS------------------------SKPLV 154 (518)
Q Consensus 117 ~~rvLDVGcGtG~~~~~L~~~------------------g~~~v~gID~s~------------------------~~~l~ 154 (518)
.-+|+|+||++|..+..+... ....|+.-|+-. .++.+
T Consensus 53 ~~~IaDlGCssG~NT~~~v~~ii~~i~~~~~~~~~~~~~pe~~v~~nDLp~NDFN~lF~~L~~~~~~~~~~~g~~~~~~f 132 (384)
T 2efj_A 53 CFKVGDLGCASGPNTFSTVRDIVQSIDKVGQEKKNELERPTIQIFLNDLFQNDFNSVFKLLPSFYRNLEKENGRKIGSCL 132 (384)
T ss_dssp EEEEEEETCCSSHHHHHHHHHHHHHHTCC----------CEEEEEEECCTTSCHHHHHHHHHHHHHHHHHHTCCCTTSEE
T ss_pred ceEEEecCCCCCchHHHHHHHHHHHHHHHhhhcccCCCCCceEEEecCCCccchHHHHhhhhhhHhhhhhhccCCCCceE
Confidence 478999999999887544321 112455556431 01234
Q ss_pred Eec---cCCCCCCCCCceeEEEEcCceeeccCChHHH---------------------------------------HHHH
Q 010086 155 ISG---EGHRIPFDGNTFDFVFVGGARLEKASKPLDF---------------------------------------ASEI 192 (518)
Q Consensus 155 ~~~---da~~LPf~D~SFD~V~s~~~~l~~~~dp~~~---------------------------------------l~Ei 192 (518)
+.| ......||++|||+|+|+.+ |||+.+.... ++-.
T Consensus 133 ~~gvpgSFy~rlfp~~S~d~v~Ss~a-LHWls~~p~~l~~~~s~~~nkg~i~i~~~sp~~v~~ay~~Qf~~D~~~FL~~R 211 (384)
T 2efj_A 133 IGAMPGSFYSRLFPEESMHFLHSCYC-LHWLSQVPSGLVTELGISVNKGCIYSSKASRPPIQKAYLDQFTKDFTTFLRIH 211 (384)
T ss_dssp EEECCSCTTSCCSCTTCEEEEEEESC-TTBCSSSCCC------CCCCTTCSSSCTTSCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEecchhhhhccCCCCceEEEEecce-eeecCCCchhhhccccccccCCceEecCCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 443 44557899999999999998 9998754322 3333
Q ss_pred HhcccCCcEEEEEecC
Q 010086 193 VRTLKPEGFAVVHVRA 208 (518)
Q Consensus 193 ~RVLKPGG~lvi~~~~ 208 (518)
+|.|||||++++.+..
T Consensus 212 a~eL~pGG~mvl~~~g 227 (384)
T 2efj_A 212 SEELISRGRMLLTFIC 227 (384)
T ss_dssp HHHEEEEEEEEEEEEC
T ss_pred HHHhccCCeEEEEEec
Confidence 8999999999998643
No 251
>3c0k_A UPF0064 protein YCCW; PUA domain, adoMet dependent methyltransferase fold; 2.00A {Escherichia coli K12}
Probab=98.28 E-value=5.9e-07 Score=93.79 Aligned_cols=93 Identities=11% Similarity=0.136 Sum_probs=68.9
Q ss_pred CCCCeEEEEcCCCCHhHHHHHhcCCCcEEEEecCCC-----------------CCcEEeccCCCCCC----CCCceeEEE
Q 010086 115 SQSAKSLCVETQYGQDVFALKEIGVEDSIGIFKKSS-----------------KPLVISGEGHRIPF----DGNTFDFVF 173 (518)
Q Consensus 115 ~~~~rvLDVGcGtG~~~~~L~~~g~~~v~gID~s~~-----------------~~l~~~~da~~LPf----~D~SFD~V~ 173 (518)
.++.+|||+|||+|..+..+++.|...|+|+|+++. ...++.+|+.+..- .+++||+|+
T Consensus 219 ~~~~~VLDl~cG~G~~sl~la~~g~~~V~~vD~s~~al~~a~~n~~~ngl~~~~v~~~~~D~~~~~~~~~~~~~~fD~Ii 298 (396)
T 3c0k_A 219 VENKRVLNCFSYTGGFAVSALMGGCSQVVSVDTSQEALDIARQNVELNKLDLSKAEFVRDDVFKLLRTYRDRGEKFDVIV 298 (396)
T ss_dssp CTTCEEEEESCTTCSHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEESCHHHHHHHHHHTTCCEEEEE
T ss_pred hCCCeEEEeeccCCHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHcCCCccceEEEECCHHHHHHHHHhcCCCCCEEE
Confidence 478899999999999999888877679999999841 11245777765421 257899999
Q ss_pred EcCce--------eeccCChHHHHHHHHhcccCCcEEEEEec
Q 010086 174 VGGAR--------LEKASKPLDFASEIVRTLKPEGFAVVHVR 207 (518)
Q Consensus 174 s~~~~--------l~~~~dp~~~l~Ei~RVLKPGG~lvi~~~ 207 (518)
+.--. .+........+.++.+.|||||++++...
T Consensus 299 ~dpP~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 340 (396)
T 3c0k_A 299 MDPPKFVENKSQLMGACRGYKDINMLAIQLLNEGGILLTFSC 340 (396)
T ss_dssp ECCSSTTTCSSSSSCCCTHHHHHHHHHHHTEEEEEEEEEEEC
T ss_pred ECCCCCCCChhHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeC
Confidence 96310 12223445788999999999999998764
No 252
>3m4x_A NOL1/NOP2/SUN family protein; mtase domain, PUA domain, RRM motif, transferase; 2.28A {Enterococcus faecium}
Probab=98.23 E-value=3.9e-07 Score=97.54 Aligned_cols=93 Identities=15% Similarity=0.113 Sum_probs=66.2
Q ss_pred CCCCCeEEEEcCCCCHhHHHHHhc--CCCcEEEEecCCC---------------CCcEEeccCCCCC-CCCCceeEEEEc
Q 010086 114 LSQSAKSLCVETQYGQDVFALKEI--GVEDSIGIFKKSS---------------KPLVISGEGHRIP-FDGNTFDFVFVG 175 (518)
Q Consensus 114 l~~~~rvLDVGcGtG~~~~~L~~~--g~~~v~gID~s~~---------------~~l~~~~da~~LP-f~D~SFD~V~s~ 175 (518)
++++.+|||+|||+|..+..+++. +...|+++|+++. ...++.+|+..++ +.+++||.|++.
T Consensus 103 ~~~g~~VLDlcaGpGgkt~~lA~~~~~~g~V~AvDis~~rl~~~~~n~~r~g~~nv~v~~~Da~~l~~~~~~~FD~Il~D 182 (456)
T 3m4x_A 103 AKPGEKVLDLCAAPGGKSTQLAAQMKGKGLLVTNEIFPKRAKILSENIERWGVSNAIVTNHAPAELVPHFSGFFDRIVVD 182 (456)
T ss_dssp CCTTCEEEESSCTTCHHHHHHHHHHTTCSEEEEECSSHHHHHHHHHHHHHHTCSSEEEECCCHHHHHHHHTTCEEEEEEE
T ss_pred CCCCCEEEEECCCcCHHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHcCCCceEEEeCCHHHhhhhccccCCEEEEC
Confidence 578999999999999988777763 2368999999841 1224567877765 457899999973
Q ss_pred C-----ceeeccCC----------------hHHHHHHHHhcccCCcEEEEEe
Q 010086 176 G-----ARLEKASK----------------PLDFASEIVRTLKPEGFAVVHV 206 (518)
Q Consensus 176 ~-----~~l~~~~d----------------p~~~l~Ei~RVLKPGG~lvi~~ 206 (518)
. ..+.+-++ ..+.+.++.+.|||||+++..+
T Consensus 183 aPCSg~G~~rr~p~~~~~~~~~~~~~l~~~Q~~iL~~a~~~LkpGG~LvYsT 234 (456)
T 3m4x_A 183 APCSGEGMFRKDPNAIKEWTEESPLYCQKRQQEILSSAIKMLKNKGQLIYST 234 (456)
T ss_dssp CCCCCGGGTTTCHHHHHHCCTTHHHHHHHHHHHHHHHHHHTEEEEEEEEEEE
T ss_pred CCCCCccccccCHHHhhhcCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEE
Confidence 2 11222110 1267899999999999998864
No 253
>1wxx_A TT1595, hypothetical protein TTHA1280; thermus thermophillus, methyltransferase, adoMet, structural genomics; 1.80A {Thermus thermophilus} SCOP: b.122.1.9 c.66.1.51 PDB: 1wxw_A 2cww_A*
Probab=98.22 E-value=2.6e-07 Score=96.10 Aligned_cols=91 Identities=13% Similarity=0.164 Sum_probs=66.6
Q ss_pred CCCeEEEEcCCCCHhHHHHHhcCCCcEEEEecCCC---------------CCcEEeccCCCCCC----CCCceeEEEEcC
Q 010086 116 QSAKSLCVETQYGQDVFALKEIGVEDSIGIFKKSS---------------KPLVISGEGHRIPF----DGNTFDFVFVGG 176 (518)
Q Consensus 116 ~~~rvLDVGcGtG~~~~~L~~~g~~~v~gID~s~~---------------~~l~~~~da~~LPf----~D~SFD~V~s~~ 176 (518)
++.+|||+|||+|..+..+++. ..+|+|+|+++. ...++.+|+.+... .+++||+|++.-
T Consensus 209 ~~~~VLDlg~G~G~~~~~la~~-~~~v~~vD~s~~~~~~a~~n~~~n~~~~~~~~~~d~~~~~~~~~~~~~~fD~Ii~dp 287 (382)
T 1wxx_A 209 RGERALDVFSYAGGFALHLALG-FREVVAVDSSAEALRRAEENARLNGLGNVRVLEANAFDLLRRLEKEGERFDLVVLDP 287 (382)
T ss_dssp CEEEEEEETCTTTHHHHHHHHH-EEEEEEEESCHHHHHHHHHHHHHTTCTTEEEEESCHHHHHHHHHHTTCCEEEEEECC
T ss_pred CCCeEEEeeeccCHHHHHHHHh-CCEEEEEECCHHHHHHHHHHHHHcCCCCceEEECCHHHHHHHHHhcCCCeeEEEECC
Confidence 7789999999999999888776 479999999741 12356777766422 267999999853
Q ss_pred cee--------eccCChHHHHHHHHhcccCCcEEEEEec
Q 010086 177 ARL--------EKASKPLDFASEIVRTLKPEGFAVVHVR 207 (518)
Q Consensus 177 ~~l--------~~~~dp~~~l~Ei~RVLKPGG~lvi~~~ 207 (518)
-.+ +.......++.++.++|||||++++...
T Consensus 288 P~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 326 (382)
T 1wxx_A 288 PAFAKGKKDVERAYRAYKEVNLRAIKLLKEGGILATASC 326 (382)
T ss_dssp CCSCCSTTSHHHHHHHHHHHHHHHHHTEEEEEEEEEEEC
T ss_pred CCCCCChhHHHHHHHHHHHHHHHHHHhcCCCCEEEEEEC
Confidence 101 1112335688999999999999988764
No 254
>3gru_A Dimethyladenosine transferase; rossman fold, ribosomal assem adenosyl-L-methionine, rRNA, methyltransferase, RNA-binding processing; HET: AMP; 1.60A {Methanocaldococcus jannaschii} PDB: 3grr_A* 3grv_A* 3gry_A* 3fyd_A 3fyc_A*
Probab=98.17 E-value=2.8e-06 Score=85.97 Aligned_cols=73 Identities=14% Similarity=0.099 Sum_probs=58.5
Q ss_pred HHHHHHHcCCCCCCCeEEEEcCCCCHhHHHHHhcCCCcEEEEecCCC-------------CCcEEeccCCCCCCCCCcee
Q 010086 104 VFQDLISEGYLSQSAKSLCVETQYGQDVFALKEIGVEDSIGIFKKSS-------------KPLVISGEGHRIPFDGNTFD 170 (518)
Q Consensus 104 l~~~L~~~gll~~~~rvLDVGcGtG~~~~~L~~~g~~~v~gID~s~~-------------~~l~~~~da~~LPf~D~SFD 170 (518)
+.+.+++...+.++.+|||||||+|..+..|.+.+ .+|+|||+++. ...++.+|+.++++++.+||
T Consensus 38 i~~~Iv~~l~~~~~~~VLEIG~G~G~lT~~La~~~-~~V~aVEid~~li~~a~~~~~~~~~v~vi~gD~l~~~~~~~~fD 116 (295)
T 3gru_A 38 FVNKAVESANLTKDDVVLEIGLGKGILTEELAKNA-KKVYVIEIDKSLEPYANKLKELYNNIEIIWGDALKVDLNKLDFN 116 (295)
T ss_dssp HHHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHHS-SEEEEEESCGGGHHHHHHHHHHCSSEEEEESCTTTSCGGGSCCS
T ss_pred HHHHHHHhcCCCCcCEEEEECCCchHHHHHHHhcC-CEEEEEECCHHHHHHHHHHhccCCCeEEEECchhhCCcccCCcc
Confidence 34444444456788999999999999999998875 79999999852 12357899999999999999
Q ss_pred EEEEcCc
Q 010086 171 FVFVGGA 177 (518)
Q Consensus 171 ~V~s~~~ 177 (518)
.|+++..
T Consensus 117 ~Iv~NlP 123 (295)
T 3gru_A 117 KVVANLP 123 (295)
T ss_dssp EEEEECC
T ss_pred EEEEeCc
Confidence 9998763
No 255
>3frh_A 16S rRNA methylase; methyltransferase domain, helical N-terminal domain, methyltransferase, plasmid, transferase; HET: SAH; 1.20A {Escherichia coli} PDB: 3fri_A* 3b89_A*
Probab=98.16 E-value=3.6e-06 Score=83.00 Aligned_cols=102 Identities=11% Similarity=0.071 Sum_probs=73.1
Q ss_pred HHhhHHHHHHHHHHcCCCCCCCeEEEEcCCCCHhHHHHHhcCCCcEEEEecCCC--------------CCcEEeccCCCC
Q 010086 97 AVNFYSSVFQDLISEGYLSQSAKSLCVETQYGQDVFALKEIGVEDSIGIFKKSS--------------KPLVISGEGHRI 162 (518)
Q Consensus 97 ~v~~~~~l~~~L~~~gll~~~~rvLDVGcGtG~~~~~L~~~g~~~v~gID~s~~--------------~~l~~~~da~~L 162 (518)
....+..+.+.+.+. .+..+|||||||+|.++..+. +...++|+|+++. +..+..+|...-
T Consensus 89 rLp~ld~fY~~i~~~---~~p~~VLDlGCG~gpLal~~~--~~~~y~a~DId~~~i~~ar~~~~~~g~~~~~~v~D~~~~ 163 (253)
T 3frh_A 89 RLAELDTLYDFIFSA---ETPRRVLDIACGLNPLALYER--GIASVWGCDIHQGLGDVITPFAREKDWDFTFALQDVLCA 163 (253)
T ss_dssp HGGGHHHHHHHHTSS---CCCSEEEEETCTTTHHHHHHT--TCSEEEEEESBHHHHHHHHHHHHHTTCEEEEEECCTTTS
T ss_pred HhhhHHHHHHHHhcC---CCCCeEEEecCCccHHHHHhc--cCCeEEEEeCCHHHHHHHHHHHHhcCCCceEEEeecccC
Confidence 345555555444433 567899999999999997766 5579999999841 112456787777
Q ss_pred CCCCCceeEEEEcCceeeccCChH-HHHHHHHhcccCCcEEEEE
Q 010086 163 PFDGNTFDFVFVGGARLEKASKPL-DFASEIVRTLKPEGFAVVH 205 (518)
Q Consensus 163 Pf~D~SFD~V~s~~~~l~~~~dp~-~~l~Ei~RVLKPGG~lvi~ 205 (518)
|+++ +||+|++.-+ +||+++.. ...-.+..-|+|+|+++-.
T Consensus 164 ~~~~-~~DvvLllk~-lh~LE~q~~~~~~~ll~aL~~~~vvVsf 205 (253)
T 3frh_A 164 PPAE-AGDLALIFKL-LPLLEREQAGSAMALLQSLNTPRMAVSF 205 (253)
T ss_dssp CCCC-BCSEEEEESC-HHHHHHHSTTHHHHHHHHCBCSEEEEEE
T ss_pred CCCC-CcchHHHHHH-HHHhhhhchhhHHHHHHHhcCCCEEEEc
Confidence 8766 8999999876 78875432 2344888899999887664
No 256
>3gcz_A Polyprotein; flavivirus, RNA capping, methyltransferase, viral enzyme STR ATP-binding, nucleotide-binding, RNA replication, structura genomics; HET: SAM; 1.70A {Yokose virus}
Probab=98.14 E-value=5e-06 Score=83.27 Aligned_cols=112 Identities=8% Similarity=-0.019 Sum_probs=76.2
Q ss_pred hccCChhHHHHHhhHHHHHHHHHHcCCCCCCCeEEEEcCCCCHhHHHHH-hcCCCcEEEEecCCC----CCc--------
Q 010086 87 DMYTSKEWIKAVNFYSSVFQDLISEGYLSQSAKSLCVETQYGQDVFALK-EIGVEDSIGIFKKSS----KPL-------- 153 (518)
Q Consensus 87 ~~w~s~~wr~~v~~~~~l~~~L~~~gll~~~~rvLDVGcGtG~~~~~L~-~~g~~~v~gID~s~~----~~l-------- 153 (518)
..|+|+.+-|-. ++.+..+++++.+|||||||+|..++... +.+...|+|+|+... +..
T Consensus 69 g~YrSRAAfKL~--------ei~eK~~Lk~~~~VLDLGaAPGGWsQvAa~~~gv~sV~GvdvG~d~~~~pi~~~~~g~~i 140 (282)
T 3gcz_A 69 GIAVSRGSAKLR--------WMEERGYVKPTGIVVDLGCGRGGWSYYAASLKNVKKVMAFTLGVQGHEKPIMRTTLGWNL 140 (282)
T ss_dssp SBCSSTHHHHHH--------HHHHTTSCCCCEEEEEETCTTCHHHHHHHTSTTEEEEEEECCCCTTSCCCCCCCBTTGGG
T ss_pred CCEecHHHHHHH--------HHHHhcCCCCCCEEEEeCCCCCHHHHHHHHhcCCCeeeeEEeccCccccccccccCCCce
Confidence 667777666632 23344578999999999999999998655 456678999998632 111
Q ss_pred E-EeccCCCCCCCCCceeEEEEcCceeeccCChH-------HHHHHHHhcccCC--cEEEEEecC
Q 010086 154 V-ISGEGHRIPFDGNTFDFVFVGGARLEKASKPL-------DFASEIVRTLKPE--GFAVVHVRA 208 (518)
Q Consensus 154 ~-~~~da~~LPf~D~SFD~V~s~~~~l~~~~dp~-------~~l~Ei~RVLKPG--G~lvi~~~~ 208 (518)
+ ...+..-..++++.+|+|+|..+ .+ .-.+. ..+.-+.++|||| |.+++-+-+
T Consensus 141 i~~~~~~dv~~l~~~~~DvVLSDmA-pn-sG~~~~D~~rs~~LL~~A~~~Lk~g~~G~Fv~KvF~ 203 (282)
T 3gcz_A 141 IRFKDKTDVFNMEVIPGDTLLCDIG-ES-SPSIAVEEQRTLRVLNCAKQWLQEGNYTEFCIKVLC 203 (282)
T ss_dssp EEEECSCCGGGSCCCCCSEEEECCC-CC-CSCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEESC
T ss_pred EEeeCCcchhhcCCCCcCEEEecCc-cC-CCChHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEec
Confidence 1 12222333567899999999876 44 32221 2466678999999 999997654
No 257
>2okc_A Type I restriction enzyme stysji M protein; NP_813429.1, N-6 DNA methylase, type I restriction enzyme ST protein; HET: SAM; 2.20A {Bacteroides thetaiotaomicron vpi-5482} SCOP: c.66.1.45
Probab=98.08 E-value=6.3e-06 Score=87.41 Aligned_cols=92 Identities=11% Similarity=0.095 Sum_probs=66.4
Q ss_pred CCCCCeEEEEcCCCCHhHHHHHhc--------------CCCcEEEEecCCC-----------------CCcEEeccCCCC
Q 010086 114 LSQSAKSLCVETQYGQDVFALKEI--------------GVEDSIGIFKKSS-----------------KPLVISGEGHRI 162 (518)
Q Consensus 114 l~~~~rvLDVGcGtG~~~~~L~~~--------------g~~~v~gID~s~~-----------------~~l~~~~da~~L 162 (518)
..++.+|||.|||+|.++..+.+. ....++|+|+++. ...+.++|....
T Consensus 169 ~~~~~~VlDpacGsG~fl~~~~~~l~~~~~~~~~~~~~~~~~i~G~Ei~~~~~~lA~~nl~l~g~~~~~~~i~~gD~l~~ 248 (445)
T 2okc_A 169 PQMGETVCDPACGTGGFLLTAYDYMKGQSASKEKRDFLRDKALHGVDNTPLVVTLASMNLYLHGIGTDRSPIVCEDSLEK 248 (445)
T ss_dssp CCTTCCEEETTCTTCHHHHHHHHHHHTCC-CCHHHHHHHHTTEEEEESCHHHHHHHHHHHHHTTCCSSCCSEEECCTTTS
T ss_pred CCCCCEEeccCCCcchHHHHHHHHHHHhcCCHHHHHhhcCeEEEEEeCCHHHHHHHHHHHHHhCCCcCCCCEeeCCCCCC
Confidence 356789999999999988655432 1257999998731 234678888776
Q ss_pred CCCCCceeEEEEcCceeeccCC-----------------hHHHHHHHHhcccCCcEEEEEec
Q 010086 163 PFDGNTFDFVFVGGARLEKASK-----------------PLDFASEIVRTLKPEGFAVVHVR 207 (518)
Q Consensus 163 Pf~D~SFD~V~s~~~~l~~~~d-----------------p~~~l~Ei~RVLKPGG~lvi~~~ 207 (518)
+... .||+|+++-- +.+... ...+++++.+.|||||++++.+.
T Consensus 249 ~~~~-~fD~Iv~NPP-f~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~~~~Lk~gG~~a~V~p 308 (445)
T 2okc_A 249 EPST-LVDVILANPP-FGTRPAGSVDINRPDFYVETKNNQLNFLQHMMLMLKTGGRAAVVLP 308 (445)
T ss_dssp CCSS-CEEEEEECCC-SSCCCTTCCCCCCTTSSSCCSCHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred cccC-CcCEEEECCC-CCCcccccchhhHhhcCCCCcchHHHHHHHHHHHhccCCEEEEEEC
Confidence 6543 8999999753 333211 13689999999999999888764
No 258
>3eld_A Methyltransferase; flavivirus, RNA capping, guanylyltransfer viral enzyme structure; HET: SFG; 1.90A {Wesselsbron virus} PDB: 3elu_A* 3elw_A* 3ely_A* 3emb_A* 3emd_A*
Probab=98.02 E-value=2.3e-05 Score=79.08 Aligned_cols=124 Identities=15% Similarity=0.093 Sum_probs=81.8
Q ss_pred hhhhhhccCCCcchhhccCChhHHHHHhhHHHHHHHHHHcCCCCCCCeEEEEcCCCCHhHHHHHh-cCCCcEEEEecCCC
Q 010086 72 ANKAVRSNIVSPSRRDMYTSKEWIKAVNFYSSVFQDLISEGYLSQSAKSLCVETQYGQDVFALKE-IGVEDSIGIFKKSS 150 (518)
Q Consensus 72 a~r~~~~~~~~~~~~~~w~s~~wr~~v~~~~~l~~~L~~~gll~~~~rvLDVGcGtG~~~~~L~~-~g~~~v~gID~s~~ 150 (518)
|.++++. +...-..|+|+.+.|-. ++. +.++++++.+|||+||++|..++.+.+ .|...|+|+|+...
T Consensus 48 ar~~l~~---~~~~~g~yrSRaa~KL~----ei~----ek~l~~~g~~vlDLGaaPGgWsqva~~~~gv~sV~Gvdlg~~ 116 (300)
T 3eld_A 48 ARRYLKE---GRTDVGISVSRGAAKIR----WLH----ERGYLRITGRVLDLGCGRGGWSYYAAAQKEVMSVKGYTLGIE 116 (300)
T ss_dssp HHHHHHH---TCSSSCCCSSTTHHHHH----HHH----HHTSCCCCEEEEEETCTTCHHHHHHHTSTTEEEEEEECCCCT
T ss_pred HHHHHHc---CCccCCCccchHHHHHH----HHH----HhCCCCCCCEEEEcCCCCCHHHHHHHHhcCCceeeeEEeccc
Confidence 5566653 22233578888777733 222 226789999999999999999988876 46668899998631
Q ss_pred ----CCc--------E-EeccCCCCCCCCCceeEEEEcCceeeccCCh-------HHHHHHHHhcccCC-cEEEEEecC
Q 010086 151 ----KPL--------V-ISGEGHRIPFDGNTFDFVFVGGARLEKASKP-------LDFASEIVRTLKPE-GFAVVHVRA 208 (518)
Q Consensus 151 ----~~l--------~-~~~da~~LPf~D~SFD~V~s~~~~l~~~~dp-------~~~l~Ei~RVLKPG-G~lvi~~~~ 208 (518)
|.. + ......-.-++.+.+|+|+|..+ .+ .-.+ ...+.-+.++|||| |.+++-+-.
T Consensus 117 ~~~~P~~~~~~~~~iv~~~~~~di~~l~~~~~DlVlsD~A-Pn-sG~~~~D~~rs~~LL~~A~~~LkpG~G~FV~KvF~ 193 (300)
T 3eld_A 117 GHEKPIHMQTLGWNIVKFKDKSNVFTMPTEPSDTLLCDIG-ES-SSNPLVERDRTMKVLENFERWKHVNTENFCVKVLA 193 (300)
T ss_dssp TSCCCCCCCBTTGGGEEEECSCCTTTSCCCCCSEEEECCC-CC-CSSHHHHHHHHHHHHHHHHHHCCTTCCEEEEEESS
T ss_pred cccccccccccCCceEEeecCceeeecCCCCcCEEeecCc-CC-CCCHHHHHHHHHHHHHHHHHHhcCCCCcEEEEecc
Confidence 111 1 12222223456789999999765 43 3222 13466678999999 999997654
No 259
>3bt7_A TRNA (uracil-5-)-methyltransferase; methyluridine, methyltransferase, TRMA, RUMT; HET: 5MU; 2.43A {Escherichia coli}
Probab=97.96 E-value=1.3e-05 Score=83.01 Aligned_cols=112 Identities=13% Similarity=0.105 Sum_probs=74.3
Q ss_pred CCeEEEEcCCCCHhHHHHHhcCCCcEEEEecCCC---------------CCcEEeccCCCCC--CCC-------------
Q 010086 117 SAKSLCVETQYGQDVFALKEIGVEDSIGIFKKSS---------------KPLVISGEGHRIP--FDG------------- 166 (518)
Q Consensus 117 ~~rvLDVGcGtG~~~~~L~~~g~~~v~gID~s~~---------------~~l~~~~da~~LP--f~D------------- 166 (518)
+.+|||+|||+|.++..+++. ..+|+|+|+++. ...++.+|+.++. +.+
T Consensus 214 ~~~vLDl~cG~G~~~l~la~~-~~~V~gvd~~~~ai~~a~~n~~~ng~~~v~~~~~d~~~~~~~~~~~~~~~~l~~~~~~ 292 (369)
T 3bt7_A 214 KGDLLELYCGNGNFSLALARN-FDRVLATEIAKPSVAAAQYNIAANHIDNVQIIRMAAEEFTQAMNGVREFNRLQGIDLK 292 (369)
T ss_dssp CSEEEEESCTTSHHHHHHGGG-SSEEEEECCCHHHHHHHHHHHHHTTCCSEEEECCCSHHHHHHHSSCCCCTTGGGSCGG
T ss_pred CCEEEEccCCCCHHHHHHHhc-CCEEEEEECCHHHHHHHHHHHHHcCCCceEEEECCHHHHHHHHhhccccccccccccc
Confidence 578999999999999988874 479999999841 1234567766541 222
Q ss_pred -CceeEEEEcCceeeccCChH-HHHHHHHhcccCCcEEEEEecCCCccCchhHhhhccCccEEEEeccCCCCCC
Q 010086 167 -NTFDFVFVGGARLEKASKPL-DFASEIVRTLKPEGFAVVHVRAKDEYSFNSFLDLFNSCKLVKSRDIDGIDSS 238 (518)
Q Consensus 167 -~SFD~V~s~~~~l~~~~dp~-~~l~Ei~RVLKPGG~lvi~~~~~~~~s~~~~~~lf~~~~~v~~~~v~~~~~~ 238 (518)
++||+|+..- |. .+..++.+.|+|+|.++...-...+ ....+..|-..|++..+.-++.|-.+
T Consensus 293 ~~~fD~Vv~dP--------Pr~g~~~~~~~~l~~~g~ivyvsc~p~t-~ard~~~l~~~y~~~~~~~~D~FP~T 357 (369)
T 3bt7_A 293 SYQCETIFVDP--------PRSGLDSETEKMVQAYPRILYISCNPET-LCKNLETLSQTHKVERLALFDQFPYT 357 (369)
T ss_dssp GCCEEEEEECC--------CTTCCCHHHHHHHTTSSEEEEEESCHHH-HHHHHHHHHHHEEEEEEEEECCSTTS
T ss_pred cCCCCEEEECc--------CccccHHHHHHHHhCCCEEEEEECCHHH-HHHHHHHHhhCcEEEEEEeeccCCCC
Confidence 4899998743 11 2356788899999987765422211 11233333346999999988875443
No 260
>1m6e_X S-adenosyl-L-methionnine:salicylic acid carboxyl methyltransferase; rossmann fold, protein-small molecule complex; HET: SAH SAL; 3.00A {Clarkia breweri} SCOP: c.66.1.35
Probab=97.96 E-value=7.5e-06 Score=85.04 Aligned_cols=90 Identities=17% Similarity=0.062 Sum_probs=63.3
Q ss_pred CCeEEEEcCCCCHhHHHHH--------h----cC-----CCcEEEEecCCC----------------CCcEEe---ccCC
Q 010086 117 SAKSLCVETQYGQDVFALK--------E----IG-----VEDSIGIFKKSS----------------KPLVIS---GEGH 160 (518)
Q Consensus 117 ~~rvLDVGcGtG~~~~~L~--------~----~g-----~~~v~gID~s~~----------------~~l~~~---~da~ 160 (518)
.-+|+|+||++|..+..+. + .+ ...|+.-|+-.. ++.++. +...
T Consensus 52 ~~~IaDlGCs~G~Nt~~~v~~ii~~i~~~~~~~~~~~~pe~~v~~nDLp~NDFntlF~~L~~~~~~~~~~f~~gvpgSFy 131 (359)
T 1m6e_X 52 RLAIADLGCSSGPNALFAVTELIKTVEELRKKMGRENSPEYQIFLNDLPGNDFNAIFRSLPIENDVDGVCFINGVPGSFY 131 (359)
T ss_dssp EECCEEESCCSSTTTTTGGGTTHHHHHHHHHSSSCSSCCEEEEEEEECTTSCHHHHHTTTTTSCSCTTCEEEEEEESCSS
T ss_pred ceEEEecCCCCCcchHHHHHHHHHHHHHHHHhcCCCCCCceEEEecCCCchHHHHHHHhcchhcccCCCEEEEecchhhh
Confidence 4689999999997663322 1 12 135777776321 123444 4555
Q ss_pred CCCCCCCceeEEEEcCceeeccCChH---------------------------------HHHHHHHhcccCCcEEEEEec
Q 010086 161 RIPFDGNTFDFVFVGGARLEKASKPL---------------------------------DFASEIVRTLKPEGFAVVHVR 207 (518)
Q Consensus 161 ~LPf~D~SFD~V~s~~~~l~~~~dp~---------------------------------~~l~Ei~RVLKPGG~lvi~~~ 207 (518)
...||++|||+|+|+.+ |||+.+.. .+++-.+|.|||||++++.+.
T Consensus 132 ~rlfp~~S~d~v~Ss~a-LHWls~~p~~l~~nkg~i~~~~~~p~~v~~ay~~Qf~~D~~~FL~~Ra~EL~pGG~mvl~~~ 210 (359)
T 1m6e_X 132 GRLFPRNTLHFIHSSYS-LMWLSQVPIGIESNKGNIYMANTCPQSVLNAYYKQFQEDHALFLRCRAQEVVPGGRMVLTIL 210 (359)
T ss_dssp SCCSCTTCBSCEEEESC-TTBCSSCCSCCCCCTTTTSSCSSSCCTTSCCSHHHHHHHHHHHHHHHHHHBCTTCEEEEEEE
T ss_pred hccCCCCceEEEEehhh-hhhcccCchhhhccCCceEecCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCceEEEEEe
Confidence 68999999999999998 99987522 137777999999999999853
No 261
>3k0b_A Predicted N6-adenine-specific DNA methylase; methylase,PF01170, putative RNA methylase, PSI,MCSG, structu genomics; 1.50A {Listeria monocytogenes str}
Probab=97.86 E-value=3.2e-05 Score=81.05 Aligned_cols=108 Identities=10% Similarity=-0.089 Sum_probs=74.0
Q ss_pred HHHHHHHHHcCCCCCCCeEEEEcCCCCHhHHHHHhcCC---------------------------------------CcE
Q 010086 102 SSVFQDLISEGYLSQSAKSLCVETQYGQDVFALKEIGV---------------------------------------EDS 142 (518)
Q Consensus 102 ~~l~~~L~~~gll~~~~rvLDVGcGtG~~~~~L~~~g~---------------------------------------~~v 142 (518)
..+...++.....+++..+||.+||+|.++..++..+. ..+
T Consensus 187 e~lAa~ll~l~~~~~~~~vlDp~CGSGt~~ieaa~~~~~~apg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~V 266 (393)
T 3k0b_A 187 ETMAAALVLLTSWHPDRPFYDPVCGSGTIPIEAALIGQNIAPGFNREFVSETWDWMPKQVWADARQEAEDLANYDQPLNI 266 (393)
T ss_dssp HHHHHHHHHHSCCCTTSCEEETTCTTSHHHHHHHHHHTTCCTTTTSCCGGGGCTTSCHHHHHHHHHHHHHHCCTTCCCCE
T ss_pred HHHHHHHHHHhCCCCCCeEEEcCCCCCHHHHHHHHHhcCcCCCccccchhhccccCCHHHHHHHHHHHHHhhcccCCceE
Confidence 34555555555567889999999999998755544221 359
Q ss_pred EEEecCCC----------------CCcEEeccCCCCCCCCCceeEEEEcCceeecc---CChHHHHHHHHhcccC--CcE
Q 010086 143 IGIFKKSS----------------KPLVISGEGHRIPFDGNTFDFVFVGGARLEKA---SKPLDFASEIVRTLKP--EGF 201 (518)
Q Consensus 143 ~gID~s~~----------------~~l~~~~da~~LPf~D~SFD~V~s~~~~l~~~---~dp~~~l~Ei~RVLKP--GG~ 201 (518)
+|+|+++. ...+.++|+.+++.++ +||+|+++--+-..+ .+...+++++.++||+ ||.
T Consensus 267 ~GvDid~~al~~Ar~Na~~~gl~~~I~~~~~D~~~~~~~~-~fD~Iv~NPPYg~rl~~~~~l~~ly~~lg~~lk~~~g~~ 345 (393)
T 3k0b_A 267 IGGDIDARLIEIAKQNAVEAGLGDLITFRQLQVADFQTED-EYGVVVANPPYGERLEDEEAVRQLYREMGIVYKRMPTWS 345 (393)
T ss_dssp EEEESCHHHHHHHHHHHHHTTCTTCSEEEECCGGGCCCCC-CSCEEEECCCCCCSHHHHHHHHHHHHHHHHHHHTCTTCE
T ss_pred EEEECCHHHHHHHHHHHHHcCCCCceEEEECChHhCCCCC-CCCEEEECCCCccccCCchhHHHHHHHHHHHHhcCCCCE
Confidence 99999841 1346789999998765 899999984201112 1223567777788877 999
Q ss_pred EEEEecCCC
Q 010086 202 AVVHVRAKD 210 (518)
Q Consensus 202 lvi~~~~~~ 210 (518)
+++.++..+
T Consensus 346 ~~iit~~~~ 354 (393)
T 3k0b_A 346 VYVLTSYEL 354 (393)
T ss_dssp EEEEECCTT
T ss_pred EEEEECCHH
Confidence 988876543
No 262
>3tqs_A Ribosomal RNA small subunit methyltransferase A; protein synthesis; 1.98A {Coxiella burnetii} SCOP: c.66.1.0
Probab=97.83 E-value=2.7e-05 Score=76.95 Aligned_cols=69 Identities=9% Similarity=0.001 Sum_probs=52.2
Q ss_pred HHHHHcCCCCCCCeEEEEcCCCCHhHHHHHhcCCCcEEEEecCCC-------------CCcEEeccCCCCCCCC----Cc
Q 010086 106 QDLISEGYLSQSAKSLCVETQYGQDVFALKEIGVEDSIGIFKKSS-------------KPLVISGEGHRIPFDG----NT 168 (518)
Q Consensus 106 ~~L~~~gll~~~~rvLDVGcGtG~~~~~L~~~g~~~v~gID~s~~-------------~~l~~~~da~~LPf~D----~S 168 (518)
+.+++...+.++.+|||||||+|..+..|.+.+ .+|+|+|+++. ...++++|+.+++|++ +.
T Consensus 19 ~~iv~~~~~~~~~~VLEIG~G~G~lt~~La~~~-~~V~avEid~~~~~~~~~~~~~~~~v~~i~~D~~~~~~~~~~~~~~ 97 (255)
T 3tqs_A 19 QKIVSAIHPQKTDTLVEIGPGRGALTDYLLTEC-DNLALVEIDRDLVAFLQKKYNQQKNITIYQNDALQFDFSSVKTDKP 97 (255)
T ss_dssp HHHHHHHCCCTTCEEEEECCTTTTTHHHHTTTS-SEEEEEECCHHHHHHHHHHHTTCTTEEEEESCTTTCCGGGSCCSSC
T ss_pred HHHHHhcCCCCcCEEEEEcccccHHHHHHHHhC-CEEEEEECCHHHHHHHHHHHhhCCCcEEEEcchHhCCHHHhccCCC
Confidence 334444346788999999999999999998877 79999999741 1235789999998864 57
Q ss_pred eeEEEEcC
Q 010086 169 FDFVFVGG 176 (518)
Q Consensus 169 FD~V~s~~ 176 (518)
|| |+++.
T Consensus 98 ~~-vv~Nl 104 (255)
T 3tqs_A 98 LR-VVGNL 104 (255)
T ss_dssp EE-EEEEC
T ss_pred eE-EEecC
Confidence 99 55543
No 263
>3lcv_B Sisomicin-gentamicin resistance methylase SGM; antibiotic resistance, methyltransferase, transferase; HET: SAM; 2.00A {Micromonospora zionensis} PDB: 3lcu_A*
Probab=97.83 E-value=2e-05 Score=78.68 Aligned_cols=105 Identities=7% Similarity=-0.022 Sum_probs=72.0
Q ss_pred HHhhHHHHHHHHHHcCCCCCCCeEEEEcCCCCHhHHHHHhc-CCCcEEEEecCCC--------------CCcEEeccCCC
Q 010086 97 AVNFYSSVFQDLISEGYLSQSAKSLCVETQYGQDVFALKEI-GVEDSIGIFKKSS--------------KPLVISGEGHR 161 (518)
Q Consensus 97 ~v~~~~~l~~~L~~~gll~~~~rvLDVGcGtG~~~~~L~~~-g~~~v~gID~s~~--------------~~l~~~~da~~ 161 (518)
....+..+...+.+. +.+..+|||||||+|-++..+... +...++++|+++. ...+...|...
T Consensus 115 RLp~lD~fY~~i~~~--i~~p~~VLDLGCG~GpLAl~~~~~~p~a~y~a~DId~~~le~a~~~l~~~g~~~~~~v~D~~~ 192 (281)
T 3lcv_B 115 RLPHLDEFYRELFRH--LPRPNTLRDLACGLNPLAAPWMGLPAETVYIASDIDARLVGFVDEALTRLNVPHRTNVADLLE 192 (281)
T ss_dssp HGGGHHHHHHHHGGG--SCCCSEEEETTCTTGGGCCTTTTCCTTCEEEEEESBHHHHHHHHHHHHHTTCCEEEEECCTTT
T ss_pred HhHhHHHHHHHHHhc--cCCCceeeeeccCccHHHHHHHhhCCCCEEEEEeCCHHHHHHHHHHHHhcCCCceEEEeeecc
Confidence 344455544433332 355779999999999998777654 5579999999841 11123444333
Q ss_pred CCCCCCceeEEEEcCceeeccCChHH-HHHHHHhcccCCcEEEEE
Q 010086 162 IPFDGNTFDFVFVGGARLEKASKPLD-FASEIVRTLKPEGFAVVH 205 (518)
Q Consensus 162 LPf~D~SFD~V~s~~~~l~~~~dp~~-~l~Ei~RVLKPGG~lvi~ 205 (518)
+-+.+.+|+|++.-+ ++|+++..+ ..-++...|+|||+++-.
T Consensus 193 -~~p~~~~DvaL~lkt-i~~Le~q~kg~g~~ll~aL~~~~vvVSf 235 (281)
T 3lcv_B 193 -DRLDEPADVTLLLKT-LPCLETQQRGSGWEVIDIVNSPNIVVTF 235 (281)
T ss_dssp -SCCCSCCSEEEETTC-HHHHHHHSTTHHHHHHHHSSCSEEEEEE
T ss_pred -cCCCCCcchHHHHHH-HHHhhhhhhHHHHHHHHHhCCCCEEEec
Confidence 336788999999987 899865432 333999999999998775
No 264
>3fut_A Dimethyladenosine transferase; methyltransferase, dimethyltransferase, dual-specific methyltransferase, 16S rRNA methyltransferase; 1.52A {Thermus thermophilus} PDB: 3fuu_A* 3fuv_A 3fuw_A* 3fux_A*
Probab=97.82 E-value=2.4e-05 Score=78.05 Aligned_cols=67 Identities=13% Similarity=0.083 Sum_probs=53.0
Q ss_pred HHHcCCCCCCCeEEEEcCCCCHhHHHHHhcCCCcEEEEecCCC------------CCcEEeccCCCCCCCCC-ceeEEEE
Q 010086 108 LISEGYLSQSAKSLCVETQYGQDVFALKEIGVEDSIGIFKKSS------------KPLVISGEGHRIPFDGN-TFDFVFV 174 (518)
Q Consensus 108 L~~~gll~~~~rvLDVGcGtG~~~~~L~~~g~~~v~gID~s~~------------~~l~~~~da~~LPf~D~-SFD~V~s 174 (518)
+++...+.++ +|||||||+|..+..|.+.+ .+|+|+|+++. ...++.+|+.++++++. .||.|++
T Consensus 39 Iv~~~~~~~~-~VLEIG~G~G~lt~~L~~~~-~~V~avEid~~~~~~l~~~~~~~~v~vi~~D~l~~~~~~~~~~~~iv~ 116 (271)
T 3fut_A 39 IVEAARPFTG-PVFEVGPGLGALTRALLEAG-AEVTAIEKDLRLRPVLEETLSGLPVRLVFQDALLYPWEEVPQGSLLVA 116 (271)
T ss_dssp HHHHHCCCCS-CEEEECCTTSHHHHHHHHTT-CCEEEEESCGGGHHHHHHHTTTSSEEEEESCGGGSCGGGSCTTEEEEE
T ss_pred HHHhcCCCCC-eEEEEeCchHHHHHHHHHcC-CEEEEEECCHHHHHHHHHhcCCCCEEEEECChhhCChhhccCccEEEe
Confidence 3333346778 99999999999999998887 79999999852 12357899999998764 7899998
Q ss_pred cC
Q 010086 175 GG 176 (518)
Q Consensus 175 ~~ 176 (518)
+.
T Consensus 117 Nl 118 (271)
T 3fut_A 117 NL 118 (271)
T ss_dssp EE
T ss_pred cC
Confidence 75
No 265
>2qfm_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC; HET: SPD MTA; 1.80A {Homo sapiens} PDB: 3c6k_A* 3c6m_A*
Probab=97.78 E-value=1.9e-05 Score=81.95 Aligned_cols=93 Identities=14% Similarity=0.197 Sum_probs=63.7
Q ss_pred CCCeEEEEcCCCCHhHHHHHhcCCCcEEEEecCCC---------C--------------CcEEeccCCCCC--C--CCCc
Q 010086 116 QSAKSLCVETQYGQDVFALKEIGVEDSIGIFKKSS---------K--------------PLVISGEGHRIP--F--DGNT 168 (518)
Q Consensus 116 ~~~rvLDVGcGtG~~~~~L~~~g~~~v~gID~s~~---------~--------------~l~~~~da~~LP--f--~D~S 168 (518)
.+.+||+||||+|..+..+.+.+..+|+.||+++. + ..++.+|+.+.. + ++++
T Consensus 188 ~pkrVL~IGgG~G~~arellk~~~~~Vt~VEID~~vie~Ar~~~~~l~~~~l~dp~~~rv~vi~~Da~~~L~~~~~~~~~ 267 (364)
T 2qfm_A 188 TGKDVLILGGGDGGILCEIVKLKPKMVTMVEIDQMVIDGCKKYMRKTCGDVLDNLKGDCYQVLIEDCIPVLKRYAKEGRE 267 (364)
T ss_dssp TTCEEEEEECTTCHHHHHHHTTCCSEEEEEESCHHHHHHHHHHCCC----CCSSSEETTEEEEESCHHHHHHHHHHHTCC
T ss_pred CCCEEEEEECChhHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhccccccccCCCcEEEEECcHHHHHHhhhccCCC
Confidence 46799999999999998777666678999999731 1 123456655421 1 3678
Q ss_pred eeEEEEcCceeeccCCh-----HHHHHHH----HhcccCCcEEEEEecC
Q 010086 169 FDFVFVGGARLEKASKP-----LDFASEI----VRTLKPEGFAVVHVRA 208 (518)
Q Consensus 169 FD~V~s~~~~l~~~~dp-----~~~l~Ei----~RVLKPGG~lvi~~~~ 208 (518)
||+|++.......-..| ..+++++ .|+|||||++++....
T Consensus 268 fDvII~D~~d~P~~~~p~~L~t~eFy~~~~~~~~~~L~pgGilv~qs~s 316 (364)
T 2qfm_A 268 FDYVINDLTAVPISTSPEEDSTWEFLRLILDLSMKVLKQDGKYFTQGNC 316 (364)
T ss_dssp EEEEEEECCSSCCCCC----CHHHHHHHHHHHHHHTEEEEEEEEEEEEE
T ss_pred ceEEEECCCCcccCcCchhhhHHHHHHHHHHHHHhhCCCCcEEEEEcCC
Confidence 99999865200111123 4667777 8999999999998643
No 266
>3ldu_A Putative methylase; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE GTP; 1.70A {Clostridium difficile}
Probab=97.75 E-value=5.2e-05 Score=79.19 Aligned_cols=107 Identities=10% Similarity=0.027 Sum_probs=74.8
Q ss_pred HHHHHHHHHcCCCCCCCeEEEEcCCCCHhHHHHHhcCC---------------------------------------CcE
Q 010086 102 SSVFQDLISEGYLSQSAKSLCVETQYGQDVFALKEIGV---------------------------------------EDS 142 (518)
Q Consensus 102 ~~l~~~L~~~gll~~~~rvLDVGcGtG~~~~~L~~~g~---------------------------------------~~v 142 (518)
..+...++.....+++.++||.+||+|.++..++..+. ..|
T Consensus 181 e~lAa~ll~~~~~~~~~~vlDp~CGSGt~lieaa~~~~~~apg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~V 260 (385)
T 3ldu_A 181 ETLAAGLIYLTPWKAGRVLVDPMCGSGTILIEAAMIGINMAPGLNREFISEKWRTLDKKIWWDVRKDAFNKIDNESKFKI 260 (385)
T ss_dssp HHHHHHHHHTSCCCTTSCEEETTCTTCHHHHHHHHHHTTCCTTTTSCCGGGGCTTSCHHHHHHHHHHHHHHSCCSCCCCE
T ss_pred HHHHHHHHHhhCCCCCCeEEEcCCCCCHHHHHHHHHHhhhCCCcccccchhhcccCCHHHHHHHHHHHHHHhhccCCceE
Confidence 44555556655567889999999999998865544321 369
Q ss_pred EEEecCCC----------------CCcEEeccCCCCCCCCCceeEEEEcCceeecc---CChHHHHHHHHhcccC--CcE
Q 010086 143 IGIFKKSS----------------KPLVISGEGHRIPFDGNTFDFVFVGGARLEKA---SKPLDFASEIVRTLKP--EGF 201 (518)
Q Consensus 143 ~gID~s~~----------------~~l~~~~da~~LPf~D~SFD~V~s~~~~l~~~---~dp~~~l~Ei~RVLKP--GG~ 201 (518)
+|+|+++. ...+.++|+.+++.+ ++||+|+++--+.... .+...+++++.++||+ ||.
T Consensus 261 ~GvDid~~ai~~Ar~Na~~~gl~~~i~~~~~D~~~l~~~-~~~D~Iv~NPPyg~rl~~~~~l~~ly~~lg~~lk~~~g~~ 339 (385)
T 3ldu_A 261 YGYDIDEESIDIARENAEIAGVDEYIEFNVGDATQFKSE-DEFGFIITNPPYGERLEDKDSVKQLYKELGYAFRKLKNWS 339 (385)
T ss_dssp EEEESCHHHHHHHHHHHHHHTCGGGEEEEECCGGGCCCS-CBSCEEEECCCCCCSHHHHHHHHHHHHHHHHHHHTSBSCE
T ss_pred EEEECCHHHHHHHHHHHHHcCCCCceEEEECChhhcCcC-CCCcEEEECCCCcCccCCHHHHHHHHHHHHHHHhhCCCCE
Confidence 99999841 123568899988875 4899999975312222 1234577888889988 888
Q ss_pred EEEEecCC
Q 010086 202 AVVHVRAK 209 (518)
Q Consensus 202 lvi~~~~~ 209 (518)
+++.++..
T Consensus 340 ~~iit~~~ 347 (385)
T 3ldu_A 340 YYLITSYE 347 (385)
T ss_dssp EEEEESCT
T ss_pred EEEEECCH
Confidence 88887654
No 267
>2px2_A Genome polyprotein [contains: capsid protein C (core protein); envelope protein M...; methyltransferase, SAH; HET: SAH; 2.00A {Murray valley encephalitis virus} PDB: 2px4_A* 2px5_A* 2pxa_A* 2pxc_A* 2px8_A* 2oy0_A*
Probab=97.74 E-value=0.00016 Score=71.54 Aligned_cols=111 Identities=10% Similarity=0.032 Sum_probs=71.9
Q ss_pred hccCChhHHHHHhhHHHHHHHHHHcCCCCCCCeEEEEcCCCCHhHHHHHhc-CC----CcEEEEe--cCCCCC-----cE
Q 010086 87 DMYTSKEWIKAVNFYSSVFQDLISEGYLSQSAKSLCVETQYGQDVFALKEI-GV----EDSIGIF--KKSSKP-----LV 154 (518)
Q Consensus 87 ~~w~s~~wr~~v~~~~~l~~~L~~~gll~~~~rvLDVGcGtG~~~~~L~~~-g~----~~v~gID--~s~~~~-----l~ 154 (518)
..|+|+.+-| +.++.+..+++++.+|||+||++|..++..++. ++ +.++|+| +.+-.+ .+
T Consensus 52 g~yRSRAayK--------L~EIdeK~likpg~~VVDLGaAPGGWSQvAa~~~~vg~V~G~vig~D~~~~P~~~~~~Gv~~ 123 (269)
T 2px2_A 52 GHPVSRGTAK--------LRWLVERRFVQPIGKVVDLGCGRGGWSYYAATMKNVQEVRGYTKGGPGHEEPMLMQSYGWNI 123 (269)
T ss_dssp SCCSSTHHHH--------HHHHHHTTSCCCCEEEEEETCTTSHHHHHHTTSTTEEEEEEECCCSTTSCCCCCCCSTTGGG
T ss_pred CCcccHHHHH--------HHHHHHcCCCCCCCEEEEcCCCCCHHHHHHhhhcCCCCceeEEEccccccCCCcccCCCceE
Confidence 4577775555 234455568999999999999999999877664 22 2445566 222211 12
Q ss_pred Ee---c-cCCCCCCCCCceeEEEEcCceeeccCChH-------HHHHHHHhcccCCc-EEEEEecCC
Q 010086 155 IS---G-EGHRIPFDGNTFDFVFVGGARLEKASKPL-------DFASEIVRTLKPEG-FAVVHVRAK 209 (518)
Q Consensus 155 ~~---~-da~~LPf~D~SFD~V~s~~~~l~~~~dp~-------~~l~Ei~RVLKPGG-~lvi~~~~~ 209 (518)
++ + |..++ +...+|+|+|-.+ .+..++. .++.-+.++||||| .+++=+-+.
T Consensus 124 i~~~~G~Df~~~--~~~~~DvVLSDMA--PnSG~~~vD~~Rs~~aL~~A~~~Lk~gG~~FvvKVFqg 186 (269)
T 2px2_A 124 VTMKSGVDVFYK--PSEISDTLLCDIG--ESSPSAEIEEQRTLRILEMVSDWLSRGPKEFCIKILCP 186 (269)
T ss_dssp EEEECSCCGGGS--CCCCCSEEEECCC--CCCSCHHHHHHHHHHHHHHHHHHHTTCCSEEEEEESCT
T ss_pred EEeeccCCccCC--CCCCCCEEEeCCC--CCCCccHHHHHHHHHHHHHHHHHhhcCCcEEEEEECCC
Confidence 23 6 87764 3568999999764 2332321 24555669999999 888866554
No 268
>3ldg_A Putative uncharacterized protein SMU.472; YPSC, methyltransferase, transferase; HET: SAH; 1.96A {Streptococcus mutans}
Probab=97.73 E-value=6.7e-05 Score=78.48 Aligned_cols=108 Identities=10% Similarity=-0.049 Sum_probs=74.5
Q ss_pred HHHHHHHHHcCCCCCCCeEEEEcCCCCHhHHHHHhcCC---------------------------------------CcE
Q 010086 102 SSVFQDLISEGYLSQSAKSLCVETQYGQDVFALKEIGV---------------------------------------EDS 142 (518)
Q Consensus 102 ~~l~~~L~~~gll~~~~rvLDVGcGtG~~~~~L~~~g~---------------------------------------~~v 142 (518)
..+...++.....+++..+||.+||+|.++...+..+. ..+
T Consensus 180 e~LAaall~l~~~~~~~~llDp~CGSGt~lIEAa~~a~~iapg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~v 259 (384)
T 3ldg_A 180 ENMAAAIILLSNWFPDKPFVDPTCGSGTFCIEAAMIGMNIAPGFNRDFAFEEWPWVDEALVTRVRNEADEQADYDIQLDI 259 (384)
T ss_dssp HHHHHHHHHHTTCCTTSCEEETTCTTSHHHHHHHHHHTTCCTTTTCCCGGGGCTTSCHHHHHHHHHHHHHHCCTTCCCCE
T ss_pred HHHHHHHHHHhCCCCCCeEEEeCCcCCHHHHHHHHHhcCcCCCccccchhhhhccCCHHHHHHHHHHHHHhhhccCCceE
Confidence 34555555555567889999999999998755543221 359
Q ss_pred EEEecCCC----------------CCcEEeccCCCCCCCCCceeEEEEcCceeeccC---ChHHHHHHHHhcccC--CcE
Q 010086 143 IGIFKKSS----------------KPLVISGEGHRIPFDGNTFDFVFVGGARLEKAS---KPLDFASEIVRTLKP--EGF 201 (518)
Q Consensus 143 ~gID~s~~----------------~~l~~~~da~~LPf~D~SFD~V~s~~~~l~~~~---dp~~~l~Ei~RVLKP--GG~ 201 (518)
+|+|+++. ...+.++|+.+++.++ +||+|+++-=+-..+. +...+++++.++||+ ||.
T Consensus 260 ~GvDid~~al~~Ar~Na~~~gl~~~I~~~~~D~~~l~~~~-~fD~Iv~NPPYG~rl~~~~~l~~ly~~lg~~lk~~~g~~ 338 (384)
T 3ldg_A 260 SGFDFDGRMVEIARKNAREVGLEDVVKLKQMRLQDFKTNK-INGVLISNPPYGERLLDDKAVDILYNEMGETFAPLKTWS 338 (384)
T ss_dssp EEEESCHHHHHHHHHHHHHTTCTTTEEEEECCGGGCCCCC-CSCEEEECCCCTTTTSCHHHHHHHHHHHHHHHTTCTTSE
T ss_pred EEEECCHHHHHHHHHHHHHcCCCCceEEEECChHHCCccC-CcCEEEECCchhhccCCHHHHHHHHHHHHHHHhhCCCcE
Confidence 99999741 1235789999998765 8999999742011222 234577888888887 999
Q ss_pred EEEEecCCC
Q 010086 202 AVVHVRAKD 210 (518)
Q Consensus 202 lvi~~~~~~ 210 (518)
+++.++..+
T Consensus 339 ~~iit~~~~ 347 (384)
T 3ldg_A 339 QFILTNDTD 347 (384)
T ss_dssp EEEEESCTT
T ss_pred EEEEECCHH
Confidence 988887543
No 269
>2b9e_A NOL1/NOP2/SUN domain family, member 5 isoform 2; methytransferase, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.65A {Homo sapiens} SCOP: c.66.1.38
Probab=97.68 E-value=0.00012 Score=74.31 Aligned_cols=92 Identities=4% Similarity=-0.040 Sum_probs=61.7
Q ss_pred CCCCCeEEEEcCCCCHhHHHHHhc--CCCcEEEEecCCC---------------CCcEEeccCCCCCCCC---CceeEEE
Q 010086 114 LSQSAKSLCVETQYGQDVFALKEI--GVEDSIGIFKKSS---------------KPLVISGEGHRIPFDG---NTFDFVF 173 (518)
Q Consensus 114 l~~~~rvLDVGcGtG~~~~~L~~~--g~~~v~gID~s~~---------------~~l~~~~da~~LPf~D---~SFD~V~ 173 (518)
++++.+|||+|||+|..+..+++. +...|+++|+++. ...++.+|+.+++..+ ++||.|+
T Consensus 100 ~~~g~~VLDlcaG~G~kt~~la~~~~~~g~V~a~D~~~~~l~~~~~n~~r~g~~~v~~~~~D~~~~~~~~~~~~~fD~Vl 179 (309)
T 2b9e_A 100 PPPGSHVIDACAAPGNKTSHLAALLKNQGKIFAFDLDAKRLASMATLLARAGVSCCELAEEDFLAVSPSDPRYHEVHYIL 179 (309)
T ss_dssp CCTTCEEEESSCTTCHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCGGGSCTTCGGGTTEEEEE
T ss_pred CCCCCEEEEeCCChhHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCCeEEEEeCChHhcCccccccCCCCEEE
Confidence 578999999999999999877763 3468999999741 1234678888876543 5899999
Q ss_pred Ec----C-ceeeccC-----------Ch-------HHHHHHHHhcccCCcEEEEEe
Q 010086 174 VG----G-ARLEKAS-----------KP-------LDFASEIVRTLKPEGFAVVHV 206 (518)
Q Consensus 174 s~----~-~~l~~~~-----------dp-------~~~l~Ei~RVLKPGG~lvi~~ 206 (518)
+. . ..+..-+ +. .+.+..+.+.|| ||+++..+
T Consensus 180 ~D~PcSg~G~~~r~pd~~~~~~~~~~~~~~l~~~Q~~iL~~a~~~l~-gG~lvYsT 234 (309)
T 2b9e_A 180 LDPSCSGSGMPSRQLEEPGAGTPSPVRLHALAGFQQRALCHALTFPS-LQRLVYST 234 (309)
T ss_dssp ECCCCCC------------------CCHHHHHHHHHHHHHHHTTCTT-CCEEEEEE
T ss_pred EcCCcCCCCCCccCCChhhhccCCHHHHHHHHHHHHHHHHHHHhccC-CCEEEEEC
Confidence 62 1 1132211 11 135677778887 99887754
No 270
>2k4m_A TR8_protein, UPF0146 protein MTH_1000; alpha+beta, rossman fold, structural genomics, PSI-2; NMR {Methanothermobacterthermautotrophicus str}
Probab=97.67 E-value=0.00028 Score=64.38 Aligned_cols=89 Identities=6% Similarity=-0.056 Sum_probs=62.5
Q ss_pred CCCCeEEEEcCCCC-HhHHHHHh-cCCCcEEEEecCCCCCcEEeccCCCCCCCC--CceeEEEEcCceeeccCChHHHHH
Q 010086 115 SQSAKSLCVETQYG-QDVFALKE-IGVEDSIGIFKKSSKPLVISGEGHRIPFDG--NTFDFVFVGGARLEKASKPLDFAS 190 (518)
Q Consensus 115 ~~~~rvLDVGcGtG-~~~~~L~~-~g~~~v~gID~s~~~~l~~~~da~~LPf~D--~SFD~V~s~~~~l~~~~dp~~~l~ 190 (518)
+++.+||+||||.| ..+..|++ .| .+|+++|+++....++++|.-+ |..+ ..||+|++..- -++....+.
T Consensus 34 ~~~~rVlEVG~G~g~~vA~~La~~~g-~~V~atDInp~Av~~v~dDiF~-P~~~~Y~~~DLIYsirP----P~El~~~i~ 107 (153)
T 2k4m_A 34 GPGTRVVEVGAGRFLYVSDYIRKHSK-VDLVLTDIKPSHGGIVRDDITS-PRMEIYRGAALIYSIRP----PAEIHSSLM 107 (153)
T ss_dssp CSSSEEEEETCTTCCHHHHHHHHHSC-CEEEEECSSCSSTTEECCCSSS-CCHHHHTTEEEEEEESC----CTTTHHHHH
T ss_pred CCCCcEEEEccCCChHHHHHHHHhCC-CeEEEEECCccccceEEccCCC-CcccccCCcCEEEEcCC----CHHHHHHHH
Confidence 46689999999999 68999987 77 5899999998766688888876 5544 48999998652 122334455
Q ss_pred HHHhcccCCcEEEEEecCCCc
Q 010086 191 EIVRTLKPEGFAVVHVRAKDE 211 (518)
Q Consensus 191 Ei~RVLKPGG~lvi~~~~~~~ 211 (518)
++.+- -|.-++|..-.++.
T Consensus 108 ~lA~~--v~adliI~pL~~E~ 126 (153)
T 2k4m_A 108 RVADA--VGARLIIKPLTGED 126 (153)
T ss_dssp HHHHH--HTCEEEEECBTTBC
T ss_pred HHHHH--cCCCEEEEcCCCCc
Confidence 55553 25557776433443
No 271
>4auk_A Ribosomal RNA large subunit methyltransferase M; YGDE; HET: TLA PGE; 1.90A {Escherichia coli} PDB: 4atn_A* 4b17_A*
Probab=97.65 E-value=9.2e-05 Score=77.06 Aligned_cols=81 Identities=10% Similarity=0.051 Sum_probs=67.5
Q ss_pred CCCCCCeEEEEcCCCCHhHHHHHhcCCCcEEEEecCCCC------C--cEEeccCCCCCCCCCceeEEEEcCceeeccCC
Q 010086 113 YLSQSAKSLCVETQYGQDVFALKEIGVEDSIGIFKKSSK------P--LVISGEGHRIPFDGNTFDFVFVGGARLEKASK 184 (518)
Q Consensus 113 ll~~~~rvLDVGcGtG~~~~~L~~~g~~~v~gID~s~~~------~--l~~~~da~~LPf~D~SFD~V~s~~~~l~~~~d 184 (518)
.+++|.++||+||.+|..+..|.+.| ..|+|||+.+-. + ..+++|+.....+++.||.|+|-.+ .+
T Consensus 208 ~l~~G~~vlDLGAaPGGWT~~l~~rg-~~V~aVD~~~l~~~l~~~~~V~~~~~d~~~~~~~~~~~D~vvsDm~-----~~ 281 (375)
T 4auk_A 208 RLANGMWAVDLGACPGGWTYQLVKRN-MWVYSVDNGPMAQSLMDTGQVTWLREDGFKFRPTRSNISWMVCDMV-----EK 281 (375)
T ss_dssp HSCTTCEEEEETCTTCHHHHHHHHTT-CEEEEECSSCCCHHHHTTTCEEEECSCTTTCCCCSSCEEEEEECCS-----SC
T ss_pred cCCCCCEEEEeCcCCCHHHHHHHHCC-CEEEEEEhhhcChhhccCCCeEEEeCccccccCCCCCcCEEEEcCC-----CC
Confidence 47899999999999999999998887 799999986521 2 2468899888888889999999654 46
Q ss_pred hHHHHHHHHhcccCC
Q 010086 185 PLDFASEIVRTLKPE 199 (518)
Q Consensus 185 p~~~l~Ei~RVLKPG 199 (518)
|.+.+.-+.+.|..|
T Consensus 282 p~~~~~l~~~wl~~~ 296 (375)
T 4auk_A 282 PAKVAALMAQWLVNG 296 (375)
T ss_dssp HHHHHHHHHHHHHTT
T ss_pred hHHhHHHHHHHHhcc
Confidence 888888888888887
No 272
>2r6z_A UPF0341 protein in RSP 3' region; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 1.80A {Neisseria gonorrhoeae}
Probab=97.64 E-value=6.1e-06 Score=81.66 Aligned_cols=65 Identities=14% Similarity=0.212 Sum_probs=49.8
Q ss_pred CCCCeEEEEcCCCCHhHHHHHhcCCCcEEEEecCC-------C----------------CCcEEeccCCCC-C-CCC--C
Q 010086 115 SQSAKSLCVETQYGQDVFALKEIGVEDSIGIFKKS-------S----------------KPLVISGEGHRI-P-FDG--N 167 (518)
Q Consensus 115 ~~~~rvLDVGcGtG~~~~~L~~~g~~~v~gID~s~-------~----------------~~l~~~~da~~L-P-f~D--~ 167 (518)
.++.+|||+|||+|..+..|++.| .+|+|+|+++ . ...++++|+.++ + +++ +
T Consensus 82 ~~~~~VLDlgcG~G~~a~~lA~~g-~~V~~vD~s~~~~~ll~~~l~~a~~n~~~~~~~~ri~~~~~d~~~~l~~~~~~~~ 160 (258)
T 2r6z_A 82 TAHPTVWDATAGLGRDSFVLASLG-LTVTAFEQHPAVACLLSDGIRRALLNPETQDTAARINLHFGNAAEQMPALVKTQG 160 (258)
T ss_dssp GGCCCEEETTCTTCHHHHHHHHTT-CCEEEEECCHHHHHHHHHHHHHHHHSHHHHHHHTTEEEEESCHHHHHHHHHHHHC
T ss_pred CCcCeEEEeeCccCHHHHHHHHhC-CEEEEEECChhhhHHHHHHHHHHHhHHHhhCCccCeEEEECCHHHHHHhhhccCC
Confidence 467899999999999999888876 6999999987 2 123567887764 4 666 8
Q ss_pred ceeEEEEcCceeec
Q 010086 168 TFDFVFVGGARLEK 181 (518)
Q Consensus 168 SFD~V~s~~~~l~~ 181 (518)
+||+|++.-. +++
T Consensus 161 ~fD~V~~dP~-~~~ 173 (258)
T 2r6z_A 161 KPDIVYLDPM-YPE 173 (258)
T ss_dssp CCSEEEECCC-C--
T ss_pred CccEEEECCC-CCC
Confidence 9999999764 444
No 273
>2ar0_A M.ecoki, type I restriction enzyme ecoki M protein; structural genomics, protein structure initiative, nysgxrc; 2.80A {Escherichia coli} SCOP: c.66.1.45 PDB: 2y7c_B 2y7h_B*
Probab=97.51 E-value=9e-05 Score=80.80 Aligned_cols=94 Identities=16% Similarity=0.054 Sum_probs=64.8
Q ss_pred CCCCCeEEEEcCCCCHhHHHHHh----cC---------------CCcEEEEecCCC--------------C------CcE
Q 010086 114 LSQSAKSLCVETQYGQDVFALKE----IG---------------VEDSIGIFKKSS--------------K------PLV 154 (518)
Q Consensus 114 l~~~~rvLDVGcGtG~~~~~L~~----~g---------------~~~v~gID~s~~--------------~------~l~ 154 (518)
..++.+|||.+||+|.++..+.+ .+ ...++|+|+++. . ..+
T Consensus 167 p~~~~~VlDPaCGSG~fLi~a~~~l~~~~~~~~~~~~~~~~~~~~~~i~GiEid~~~~~lA~~nl~l~gi~~~~~~~~~I 246 (541)
T 2ar0_A 167 PQPREVVQDPAAGTAGFLIEADRYVKSQTNDLDDLDGDTQDFQIHRAFIGLELVPGTRRLALMNCLLHDIEGNLDHGGAI 246 (541)
T ss_dssp CCTTCCEEETTCTTTHHHHHHHHHHHTTTTTTTTSCHHHHHHHHHTSEEEEESCHHHHHHHHHHHHTTTCCCBGGGTBSE
T ss_pred cCCCCeEecCCcccchHHHHHHHHHHHhhcccccCCHHHHhhhhcceEEEEcCCHHHHHHHHHHHHHhCCCccccccCCe
Confidence 35678999999999998754432 11 137999998731 1 345
Q ss_pred EeccCCCCC-CCCCceeEEEEcCceeeccCC--------------hHHHHHHHHhcccCCcEEEEEecC
Q 010086 155 ISGEGHRIP-FDGNTFDFVFVGGARLEKASK--------------PLDFASEIVRTLKPEGFAVVHVRA 208 (518)
Q Consensus 155 ~~~da~~LP-f~D~SFD~V~s~~~~l~~~~d--------------p~~~l~Ei~RVLKPGG~lvi~~~~ 208 (518)
.++|....+ ++++.||+|+++-- +..... ...++..+.+.|||||++++.+..
T Consensus 247 ~~gDtL~~~~~~~~~fD~Vv~NPP-f~~~~~~~~~~~~~~~~~~~~~~Fl~~~l~~Lk~gGr~a~V~p~ 314 (541)
T 2ar0_A 247 RLGNTLGSDGENLPKAHIVATNPP-FGSAAGTNITRTFVHPTSNKQLCFMQHIIETLHPGGRAAVVVPD 314 (541)
T ss_dssp EESCTTSHHHHTSCCEEEEEECCC-CTTCSSCCCCSCCSSCCSCHHHHHHHHHHHHEEEEEEEEEEEEH
T ss_pred EeCCCcccccccccCCeEEEECCC-cccccchhhHhhcCCCCCchHHHHHHHHHHHhCCCCEEEEEecC
Confidence 677765543 56789999999752 222111 126889999999999998887643
No 274
>3r24_A NSP16, 2'-O-methyl transferase; methyltransferase, zinc-finger, transferase, viral protein; HET: SAM; 2.00A {Sars coronavirus}
Probab=97.50 E-value=0.00099 Score=67.19 Aligned_cols=129 Identities=12% Similarity=0.061 Sum_probs=82.3
Q ss_pred HHhhHHHHHHHHHH-cCCCCCCCeEEEEcC------CCCHhHHHHHhcCC--CcEEEEecCCCC---CcEEeccCCCCCC
Q 010086 97 AVNFYSSVFQDLIS-EGYLSQSAKSLCVET------QYGQDVFALKEIGV--EDSIGIFKKSSK---PLVISGEGHRIPF 164 (518)
Q Consensus 97 ~v~~~~~l~~~L~~-~gll~~~~rvLDVGc------GtG~~~~~L~~~g~--~~v~gID~s~~~---~l~~~~da~~LPf 164 (518)
.+.-|+++.+.|-. .--++.|.+|||+|+ -+|. ..+++.+. ..++++|+.+.. ...++||...+..
T Consensus 89 nv~kytqlcqyl~~~~~~vp~gmrVLDLGA~s~kg~APGS--~VLr~~~p~g~~VVavDL~~~~sda~~~IqGD~~~~~~ 166 (344)
T 3r24_A 89 NVAKYTQLCQYLNTLTLAVPYNMRVIHFGAGSDKGVAPGT--AVLRQWLPTGTLLVDSDLNDFVSDADSTLIGDCATVHT 166 (344)
T ss_dssp HHHHHHHHHHHHTTSCCCCCTTCEEEEESCCCTTSBCHHH--HHHHHHSCTTCEEEEEESSCCBCSSSEEEESCGGGEEE
T ss_pred eHHHHHHHHHHhccccEeecCCCEEEeCCCCCCCCCCCcH--HHHHHhCCCCcEEEEeeCcccccCCCeEEEcccccccc
Confidence 45678899988843 234677999999997 4455 34555432 389999998742 3457899765433
Q ss_pred CCCceeEEEEcCc--eeecc--CC-----h-HHHHHHHHhcccCCcEEEEEecCCCccCchhHhhhccCccEEEEe
Q 010086 165 DGNTFDFVFVGGA--RLEKA--SK-----P-LDFASEIVRTLKPEGFAVVHVRAKDEYSFNSFLDLFNSCKLVKSR 230 (518)
Q Consensus 165 ~D~SFD~V~s~~~--~l~~~--~d-----p-~~~l~Ei~RVLKPGG~lvi~~~~~~~~s~~~~~~lf~~~~~v~~~ 230 (518)
.+.||+|+|-.+ .--+. +. . +.++.-+.++|||||.+++=+-++... ..+.++.+.|+.|+.+
T Consensus 167 -~~k~DLVISDMAPNtTG~~D~d~~Rs~~L~ElALdfA~~~LkpGGsFvVKVFQGsg~--~~L~~lrk~F~~VK~f 239 (344)
T 3r24_A 167 -ANKWDLIISDMYDPRTKHVTKENDSKEGFFTYLCGFIKQKLALGGSIAVKITEHSWN--ADLYKLMGHFSWWTAF 239 (344)
T ss_dssp -SSCEEEEEECCCCTTSCSSCSCCCCCCTHHHHHHHHHHHHEEEEEEEEEEECSSSCC--HHHHHHHTTEEEEEEE
T ss_pred -CCCCCEEEecCCCCcCCccccchhHHHHHHHHHHHHHHHhCcCCCEEEEEEecCCCH--HHHHHHHhhCCeEEEE
Confidence 478999999654 00111 11 1 245566778999999999976555442 3354555556555544
No 275
>2oyr_A UPF0341 protein YHIQ; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Shigella flexneri 2A} SCOP: c.66.1.55 PDB: 2pgx_A 2pkw_A
Probab=97.47 E-value=3.9e-05 Score=76.12 Aligned_cols=84 Identities=10% Similarity=0.127 Sum_probs=58.5
Q ss_pred CCCC--CeEEEEcCCCCHhHHHHHhcCCCcEEEEecCCC------------------------CCcEEeccCCC-CCCCC
Q 010086 114 LSQS--AKSLCVETQYGQDVFALKEIGVEDSIGIFKKSS------------------------KPLVISGEGHR-IPFDG 166 (518)
Q Consensus 114 l~~~--~rvLDVGcGtG~~~~~L~~~g~~~v~gID~s~~------------------------~~l~~~~da~~-LPf~D 166 (518)
++++ .+|||++||+|..+..++..| .+|+++|+++. ...++.+|+.+ |+...
T Consensus 84 l~~g~~~~VLDl~~G~G~dal~lA~~g-~~V~~vE~~~~~~~l~~~~l~~a~~~~~~~~~l~~~i~~~~~D~~~~L~~~~ 162 (258)
T 2oyr_A 84 IKGDYLPDVVDATAGLGRDAFVLASVG-CRVRMLERNPVVAALLDDGLARGYADAEIGGWLQERLQLIHASSLTALTDIT 162 (258)
T ss_dssp CBTTBCCCEEETTCTTCHHHHHHHHHT-CCEEEEECCHHHHHHHHHHHHHHHHCTTTHHHHHHHEEEEESCHHHHSTTCS
T ss_pred ccCCCCCEEEEcCCcCCHHHHHHHHcC-CEEEEEECCHHHHHHHHHHHHHHHhhHhhhhhhhcCEEEEECCHHHHHHhCc
Confidence 4566 899999999999998888877 58999999851 01245677765 45323
Q ss_pred CceeEEEEcCceeeccCChHHHHHHHHhcccCCc
Q 010086 167 NTFDFVFVGGARLEKASKPLDFASEIVRTLKPEG 200 (518)
Q Consensus 167 ~SFD~V~s~~~~l~~~~dp~~~l~Ei~RVLKPGG 200 (518)
++||+|++.-. +++- ....++++..|+||+.+
T Consensus 163 ~~fDvV~lDP~-y~~~-~~saavkk~~~~lr~l~ 194 (258)
T 2oyr_A 163 PRPQVVYLDPM-FPHK-QKSALVKKEMRVFQSLV 194 (258)
T ss_dssp SCCSEEEECCC-CCCC-CC-----HHHHHHHHHS
T ss_pred ccCCEEEEcCC-CCCc-ccchHHHHHHHHHHHhh
Confidence 47999999876 6552 23356778889998866
No 276
>3ftd_A Dimethyladenosine transferase; KSGA, rossmann-like fold, RNA methyltransferase, mtase, anti resistance, methyltransferase, RNA-binding; 1.44A {Aquifex aeolicus} PDB: 3ftc_A 3fte_A 3ftf_A* 3r9x_B*
Probab=97.46 E-value=0.00012 Score=71.78 Aligned_cols=61 Identities=15% Similarity=0.091 Sum_probs=47.2
Q ss_pred HHHHcCCCCCCCeEEEEcCCCCHhHHHHHhcCCCcEEEEecCC--------C---CCcEEeccCCCCCCCCC
Q 010086 107 DLISEGYLSQSAKSLCVETQYGQDVFALKEIGVEDSIGIFKKS--------S---KPLVISGEGHRIPFDGN 167 (518)
Q Consensus 107 ~L~~~gll~~~~rvLDVGcGtG~~~~~L~~~g~~~v~gID~s~--------~---~~l~~~~da~~LPf~D~ 167 (518)
.+++...+.++.+|||||||+|..+..|.+.|..+++|+|+++ . ...++.+|+.++||++.
T Consensus 22 ~iv~~~~~~~~~~VLDiG~G~G~lt~~L~~~~~~~v~avEid~~~~~~~~~~~~~~v~~i~~D~~~~~~~~~ 93 (249)
T 3ftd_A 22 KIAEELNIEEGNTVVEVGGGTGNLTKVLLQHPLKKLYVIELDREMVENLKSIGDERLEVINEDASKFPFCSL 93 (249)
T ss_dssp HHHHHTTCCTTCEEEEEESCHHHHHHHHTTSCCSEEEEECCCHHHHHHHTTSCCTTEEEECSCTTTCCGGGS
T ss_pred HHHHhcCCCCcCEEEEEcCchHHHHHHHHHcCCCeEEEEECCHHHHHHHHhccCCCeEEEEcchhhCChhHc
Confidence 3344444668899999999999999999887657999999973 1 11357899999998864
No 277
>3p8z_A Mtase, non-structural protein 5; methyltransferase, RNA, ER, transferase-transferase inhibito; HET: 36A SAH; 1.70A {Dengue virus 3} SCOP: c.66.1.25 PDB: 3p97_A* 2xbm_A* 3evg_A*
Probab=97.39 E-value=0.00094 Score=65.44 Aligned_cols=119 Identities=14% Similarity=0.128 Sum_probs=79.8
Q ss_pred hhhhhhhccCCCcchhhccCChhHHHHHhhHHHHHHHHHHcCCCCCCCeEEEEcCCCCHhHHHHH-hcCCCcEEEEecCC
Q 010086 71 TANKAVRSNIVSPSRRDMYTSKEWIKAVNFYSSVFQDLISEGYLSQSAKSLCVETQYGQDVFALK-EIGVEDSIGIFKKS 149 (518)
Q Consensus 71 ~a~r~~~~~~~~~~~~~~w~s~~wr~~v~~~~~l~~~L~~~gll~~~~rvLDVGcGtG~~~~~L~-~~g~~~v~gID~s~ 149 (518)
.|+++++. +... ..|.|+.+-|- .++.+..+++++.+|||+||++|..++..+ +.|...|+|+|+-.
T Consensus 45 ~ar~~l~~---g~~~-g~yrSRa~~KL--------~ei~ek~~l~~g~~VvDLGaapGGWSq~~a~~~g~~~V~avdvG~ 112 (267)
T 3p8z_A 45 EAKEGLKR---GETT-HHAVSRGSAKL--------QWFVERNMVIPEGRVIDLGCGRGGWSYYCAGLKKVTEVRGYTKGG 112 (267)
T ss_dssp HHHHHHHT---TCCS-SCCSSTHHHHH--------HHHHHTTSSCCCEEEEEESCTTSHHHHHHHTSTTEEEEEEECCCS
T ss_pred HHHHHHhc---CCcC-CCccchHHHHH--------HHHHHhcCCCCCCEEEEcCCCCCcHHHHHHHhcCCCEEEEEecCC
Confidence 36666764 3333 67788766662 234455578999999999999999998554 45777999999863
Q ss_pred C----CCc----------EEec-cCCCCCCCCCceeEEEEcCceeeccCChH-------HHHHHHHhcccCCcEEEEEe
Q 010086 150 S----KPL----------VISG-EGHRIPFDGNTFDFVFVGGARLEKASKPL-------DFASEIVRTLKPEGFAVVHV 206 (518)
Q Consensus 150 ~----~~l----------~~~~-da~~LPf~D~SFD~V~s~~~~l~~~~dp~-------~~l~Ei~RVLKPGG~lvi~~ 206 (518)
. |.+ +.++ |...+|= ..+|.|+|--+ +..++|. +++.-+.+.|++ |-+++-+
T Consensus 113 ~ghe~P~~~~s~gwn~v~fk~gvDv~~~~~--~~~DtllcDIg--eSs~~~~vE~~RtlrvLela~~wL~~-~~fc~KV 186 (267)
T 3p8z_A 113 PGHEEPVPMSTYGWNIVKLMSGKDVFYLPP--EKCDTLLCDIG--ESSPSPTVEESRTIRVLKMVEPWLKN-NQFCIKV 186 (267)
T ss_dssp TTSCCCCCCCCTTTTSEEEECSCCGGGCCC--CCCSEEEECCC--CCCSCHHHHHHHHHHHHHHHGGGCSS-CEEEEEE
T ss_pred CCccCcchhhhcCcCceEEEeccceeecCC--ccccEEEEecC--CCCCChhhhhhHHHHHHHHHHHhccc-CCEEEEE
Confidence 2 111 3456 7655532 56999999765 4444553 255556788899 6776654
No 278
>2qy6_A UPF0209 protein YFCK; structural genomics, unknown function, PSI-2, protein struct initiative; 2.00A {Escherichia coli}
Probab=97.37 E-value=0.00012 Score=72.53 Aligned_cols=88 Identities=16% Similarity=0.109 Sum_probs=59.6
Q ss_pred CCCCeEEEEcCCCCHhHHHHHhc-------CC------CcEEEEecCCC--------------------------C----
Q 010086 115 SQSAKSLCVETQYGQDVFALKEI-------GV------EDSIGIFKKSS--------------------------K---- 151 (518)
Q Consensus 115 ~~~~rvLDVGcGtG~~~~~L~~~-------g~------~~v~gID~s~~--------------------------~---- 151 (518)
++..+||+||+|+|..+..+.+. +. .++++++..+- +
T Consensus 59 ~~~~~ILEiGfGtG~n~l~~~~~~~~~~~~~p~~~~~~l~~isiE~~p~~~~~l~~a~~~~p~l~~~a~~l~~~w~~~~~ 138 (257)
T 2qy6_A 59 HPLFVVAESGFGTGLNFLTLWQAFDQFREAHPQAQLQRLHFISFEKFPLTRADLALAHQHWPELAPWAEQLQAQWPMPLP 138 (257)
T ss_dssp SSEEEEEESCCTTSHHHHHHHHHHHHHHHHCTTSSCCEEEEEEEESSCCCHHHHHHHHTTCGGGHHHHHHHHHTCCCSCS
T ss_pred CCCCEEEEECCChHHHHHHHHHHHHhhhhhCCCCCcceeEEEEEECCcCCHHHHHHHHhcChhHHHHHHHHHHhcccccc
Confidence 34579999999999987554321 21 47999997540 0
Q ss_pred ---------C----cEEeccCCC-CCCCCC----ceeEEEEcCceeeccCCh----HHHHHHHHhcccCCcEEEE
Q 010086 152 ---------P----LVISGEGHR-IPFDGN----TFDFVFVGGARLEKASKP----LDFASEIVRTLKPEGFAVV 204 (518)
Q Consensus 152 ---------~----l~~~~da~~-LPf~D~----SFD~V~s~~~~l~~~~dp----~~~l~Ei~RVLKPGG~lvi 204 (518)
. .++.+|+.+ ||--++ .||+||.-. |.-..+| ..+++++.|.|||||+++.
T Consensus 139 g~~r~~~~~~~~~l~l~~GDa~~~l~~~~~~~~~~~D~iflD~--fsp~~~p~lw~~~~l~~l~~~L~pGG~l~t 211 (257)
T 2qy6_A 139 GCHRLLLDEGRVTLDLWFGDINELISQLDDSLNQKVDAWFLDG--FAPAKNPDMWTQNLFNAMARLARPGGTLAT 211 (257)
T ss_dssp EEEEEEEC--CEEEEEEESCHHHHGGGSCGGGTTCEEEEEECS--SCTTTCGGGCCHHHHHHHHHHEEEEEEEEE
T ss_pred chhheeccCCceEEEEEECcHHHHHhhcccccCCeEEEEEECC--CCcccChhhcCHHHHHHHHHHcCCCcEEEE
Confidence 0 024677766 554333 799999854 4433344 3689999999999999884
No 279
>3lkz_A Non-structural protein 5; flavivirus, methyltransferase, inhibitor, P nucleotide-binding, RNA replication, viral protein; HET: SFG; 2.00A {West nile virus}
Probab=97.37 E-value=0.00068 Score=68.33 Aligned_cols=98 Identities=17% Similarity=0.136 Sum_probs=68.9
Q ss_pred HHHHHcCCCCCCCeEEEEcCCCCHhHHHHH-hcCCCcEEEEecCCC----CCc----------EEec-cCCCCCCCCCce
Q 010086 106 QDLISEGYLSQSAKSLCVETQYGQDVFALK-EIGVEDSIGIFKKSS----KPL----------VISG-EGHRIPFDGNTF 169 (518)
Q Consensus 106 ~~L~~~gll~~~~rvLDVGcGtG~~~~~L~-~~g~~~v~gID~s~~----~~l----------~~~~-da~~LPf~D~SF 169 (518)
.++.+..+++++.+||||||++|..++..+ +.|...|+|+|+-.. |.+ +..+ |...++- ..+
T Consensus 84 ~ei~~~~~l~~~~~VlDLGaapGGwsq~~~~~~gv~~V~avdvG~~~he~P~~~~ql~w~lV~~~~~~Dv~~l~~--~~~ 161 (321)
T 3lkz_A 84 RWLVERRFLEPVGKVIDLGCGRGGWCYYMATQKRVQEVRGYTKGGPGHEEPQLVQSYGWNIVTMKSGVDVFYRPS--ECC 161 (321)
T ss_dssp HHHHHTTSCCCCEEEEEETCTTCHHHHHHTTCTTEEEEEEECCCSTTSCCCCCCCBTTGGGEEEECSCCTTSSCC--CCC
T ss_pred HHHHHhcCCCCCCEEEEeCCCCCcHHHHHHhhcCCCEEEEEEcCCCCccCcchhhhcCCcceEEEeccCHhhCCC--CCC
Confidence 344556788999999999999999998544 457778999998642 211 1234 6666643 569
Q ss_pred eEEEEcCceeeccCChH-------HHHHHHHhcccCC-cEEEEEec
Q 010086 170 DFVFVGGARLEKASKPL-------DFASEIVRTLKPE-GFAVVHVR 207 (518)
Q Consensus 170 D~V~s~~~~l~~~~dp~-------~~l~Ei~RVLKPG-G~lvi~~~ 207 (518)
|+|+|--+ +..++|. +++.-+.+.|++| |-+++-+-
T Consensus 162 D~ivcDig--eSs~~~~ve~~Rtl~vLel~~~wL~~~~~~f~~KVl 205 (321)
T 3lkz_A 162 DTLLCDIG--ESSSSAEVEEHRTIRVLEMVEDWLHRGPREFCVKVL 205 (321)
T ss_dssp SEEEECCC--CCCSCHHHHHHHHHHHHHHHHHHHTTCCCEEEEEES
T ss_pred CEEEEECc--cCCCChhhhhhHHHHHHHHHHHHhccCCCcEEEEEc
Confidence 99999654 5555653 2555667888999 88777553
No 280
>3uzu_A Ribosomal RNA small subunit methyltransferase A; ssgcid, seattle structural genomics center for infectio disease; 1.75A {Burkholderia pseudomallei}
Probab=97.31 E-value=0.00018 Score=72.00 Aligned_cols=53 Identities=6% Similarity=-0.041 Sum_probs=42.4
Q ss_pred CCCCCCeEEEEcCCCCHhHHHHHhcCCCc----EEEEecCCC-----------CCcEEeccCCCCCCCC
Q 010086 113 YLSQSAKSLCVETQYGQDVFALKEIGVED----SIGIFKKSS-----------KPLVISGEGHRIPFDG 166 (518)
Q Consensus 113 ll~~~~rvLDVGcGtG~~~~~L~~~g~~~----v~gID~s~~-----------~~l~~~~da~~LPf~D 166 (518)
.+.++.+|||||||+|..+..|.+.+ .. |+|+|+++. ...++.+|+.++||++
T Consensus 39 ~~~~~~~VLEIG~G~G~lt~~La~~~-~~~~~~V~avDid~~~l~~a~~~~~~~v~~i~~D~~~~~~~~ 106 (279)
T 3uzu_A 39 RPERGERMVEIGPGLGALTGPVIARL-ATPGSPLHAVELDRDLIGRLEQRFGELLELHAGDALTFDFGS 106 (279)
T ss_dssp CCCTTCEEEEECCTTSTTHHHHHHHH-CBTTBCEEEEECCHHHHHHHHHHHGGGEEEEESCGGGCCGGG
T ss_pred CCCCcCEEEEEccccHHHHHHHHHhC-CCcCCeEEEEECCHHHHHHHHHhcCCCcEEEECChhcCChhH
Confidence 46788999999999999999888765 34 999999841 1235789999999865
No 281
>2dul_A N(2),N(2)-dimethylguanosine tRNA methyltransferas; tRNA modification enzyme, guanine 26, N(2),N(2)-dimethyltran structural genomics; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.58 PDB: 2ejt_A* 2eju_A* 2ytz_A*
Probab=97.29 E-value=0.00017 Score=75.14 Aligned_cols=86 Identities=14% Similarity=0.129 Sum_probs=62.1
Q ss_pred CCCeEEEEcCCCCHhHHHHHhc-CCCcEEEEecCCC---------------------------C---CcEEeccCCCCCC
Q 010086 116 QSAKSLCVETQYGQDVFALKEI-GVEDSIGIFKKSS---------------------------K---PLVISGEGHRIPF 164 (518)
Q Consensus 116 ~~~rvLDVGcGtG~~~~~L~~~-g~~~v~gID~s~~---------------------------~---~l~~~~da~~LPf 164 (518)
++.+|||+|||+|..+..++.. +...|+++|+++. . ..++++|+..+..
T Consensus 47 ~~~~VLDl~aGtG~~~l~~a~~~~~~~V~avDi~~~av~~a~~N~~~n~~~~~~~~~~~~~~~gl~~i~v~~~Da~~~~~ 126 (378)
T 2dul_A 47 NPKIVLDALSATGIRGIRFALETPAEEVWLNDISEDAYELMKRNVMLNFDGELRESKGRAILKGEKTIVINHDDANRLMA 126 (378)
T ss_dssp CCSEEEESSCTTSHHHHHHHHHSSCSEEEEEESCHHHHHHHHHHHHHHCCSCCEECSSEEEEESSSEEEEEESCHHHHHH
T ss_pred CCCEEEECCCchhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHHhcccccccccccccccCCCceEEEcCcHHHHHH
Confidence 5789999999999998777664 5468999999741 1 1234667655421
Q ss_pred -CCCceeEEEEcCceeeccCChHHHHHHHHhcccCCcEEEEEe
Q 010086 165 -DGNTFDFVFVGGARLEKASKPLDFASEIVRTLKPEGFAVVHV 206 (518)
Q Consensus 165 -~D~SFD~V~s~~~~l~~~~dp~~~l~Ei~RVLKPGG~lvi~~ 206 (518)
..+.||+|+..- +. .+..++..+.|.|||||+++++.
T Consensus 127 ~~~~~fD~I~lDP--~~---~~~~~l~~a~~~lk~gG~l~vt~ 164 (378)
T 2dul_A 127 ERHRYFHFIDLDP--FG---SPMEFLDTALRSAKRRGILGVTA 164 (378)
T ss_dssp HSTTCEEEEEECC--SS---CCHHHHHHHHHHEEEEEEEEEEE
T ss_pred hccCCCCEEEeCC--CC---CHHHHHHHHHHhcCCCCEEEEEe
Confidence 146899999643 21 24678999999999999887764
No 282
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=97.22 E-value=0.0005 Score=77.24 Aligned_cols=106 Identities=7% Similarity=-0.008 Sum_probs=68.3
Q ss_pred HHHHHHHHcCCCCCCCeEEEEcCCCCHhHHHHHhcC-------------------------------------------C
Q 010086 103 SVFQDLISEGYLSQSAKSLCVETQYGQDVFALKEIG-------------------------------------------V 139 (518)
Q Consensus 103 ~l~~~L~~~gll~~~~rvLDVGcGtG~~~~~L~~~g-------------------------------------------~ 139 (518)
.+...++.....+++..+||.+||+|.++...+..+ .
T Consensus 177 ~LAa~ll~~~~~~~~~~llDP~CGSGt~lIeAa~~a~~~apG~~R~~f~fe~w~~~~~~~w~~~~~ea~~~~~~~~~~~~ 256 (703)
T 3v97_A 177 TLAAAIVMRSGWQPGTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIWQEVKAEAQTRARKGLAEYS 256 (703)
T ss_dssp HHHHHHHHHTTCCTTSCEEETTCTTSHHHHHHHHHHTTCCTTTTCCCCTTTTBTTCCHHHHHHHHHHHHHHHHHHHHHCC
T ss_pred HHHHHHHHhhCCCCCCeEEecCCCCcHHHHHHHHHHhhcCCCCCccccchhhcccCCHHHHHHHHHHHHHHhhhccccCC
Confidence 444445555456778899999999999875443321 1
Q ss_pred CcEEEEecCCC----------------CCcEEeccCCCC--CCCCCceeEEEEcCc-eeeccCC--hH---HHHHHHHhc
Q 010086 140 EDSIGIFKKSS----------------KPLVISGEGHRI--PFDGNTFDFVFVGGA-RLEKASK--PL---DFASEIVRT 195 (518)
Q Consensus 140 ~~v~gID~s~~----------------~~l~~~~da~~L--Pf~D~SFD~V~s~~~-~l~~~~d--p~---~~l~Ei~RV 195 (518)
..++|+|+++. ...+.++|+.++ |+++++||+|+++-= ....-.. .. +.+.++.|.
T Consensus 257 ~~i~G~Did~~av~~A~~N~~~agv~~~i~~~~~D~~~~~~~~~~~~~d~Iv~NPPYG~Rlg~~~~l~~ly~~l~~~lk~ 336 (703)
T 3v97_A 257 SHFYGSDSDARVIQRARTNARLAGIGELITFEVKDVAQLTNPLPKGPYGTVLSNPPYGERLDSEPALIALHSLLGRIMKN 336 (703)
T ss_dssp CCEEEEESCHHHHHHHHHHHHHTTCGGGEEEEECCGGGCCCSCTTCCCCEEEECCCCCC---CCHHHHHHHHHHHHHHHH
T ss_pred ccEEEEECCHHHHHHHHHHHHHcCCCCceEEEECChhhCccccccCCCCEEEeCCCccccccchhHHHHHHHHHHHHHHh
Confidence 37999999741 123568888887 555669999999731 0111111 12 335566666
Q ss_pred ccCCcEEEEEecC
Q 010086 196 LKPEGFAVVHVRA 208 (518)
Q Consensus 196 LKPGG~lvi~~~~ 208 (518)
++|||.+++.++.
T Consensus 337 ~~~g~~~~ilt~~ 349 (703)
T 3v97_A 337 QFGGWNLSLFSAS 349 (703)
T ss_dssp HCTTCEEEEEESC
T ss_pred hCCCCeEEEEeCC
Confidence 7789999888754
No 283
>1qyr_A KSGA, high level kasugamycin resistance protein, S-adenosylMet; adenosine dimethyltransferase, rRNA modification, transferase, translation; 2.10A {Escherichia coli} SCOP: c.66.1.24 PDB: 4adv_V 3tpz_A
Probab=97.20 E-value=0.00017 Score=71.01 Aligned_cols=66 Identities=8% Similarity=-0.158 Sum_probs=47.5
Q ss_pred HHHcCCCCCCCeEEEEcCCCCHhHHHHHhcCCCc--EEEEecCCC---------C----CcEEeccCCCCCCCCC-----
Q 010086 108 LISEGYLSQSAKSLCVETQYGQDVFALKEIGVED--SIGIFKKSS---------K----PLVISGEGHRIPFDGN----- 167 (518)
Q Consensus 108 L~~~gll~~~~rvLDVGcGtG~~~~~L~~~g~~~--v~gID~s~~---------~----~l~~~~da~~LPf~D~----- 167 (518)
+++...+.++.+|||||||+|..+. +++ + .+ |+|+|+++. . ..++++|+..++|++.
T Consensus 13 iv~~~~~~~~~~VLEIG~G~G~lt~-l~~-~-~~~~v~avEid~~~~~~a~~~~~~~~~v~~i~~D~~~~~~~~~~~~~~ 89 (252)
T 1qyr_A 13 IVSAINPQKGQAMVEIGPGLAALTE-PVG-E-RLDQLTVIELDRDLAARLQTHPFLGPKLTIYQQDAMTFNFGELAEKMG 89 (252)
T ss_dssp HHHHHCCCTTCCEEEECCTTTTTHH-HHH-T-TCSCEEEECCCHHHHHHHHTCTTTGGGEEEECSCGGGCCHHHHHHHHT
T ss_pred HHHhcCCCCcCEEEEECCCCcHHHH-hhh-C-CCCeEEEEECCHHHHHHHHHHhccCCceEEEECchhhCCHHHhhcccC
Confidence 3333346788999999999999999 765 4 46 999999731 1 2356899999887643
Q ss_pred ceeEEEEcC
Q 010086 168 TFDFVFVGG 176 (518)
Q Consensus 168 SFD~V~s~~ 176 (518)
..|.|+++.
T Consensus 90 ~~~~vvsNl 98 (252)
T 1qyr_A 90 QPLRVFGNL 98 (252)
T ss_dssp SCEEEEEEC
T ss_pred CceEEEECC
Confidence 356777765
No 284
>3axs_A Probable N(2),N(2)-dimethylguanosine tRNA methylt TRM1; structural genomics, riken structural genomics/proteomics in RSGI; HET: SFG; 2.16A {Aquifex aeolicus} PDB: 3axt_A*
Probab=97.17 E-value=0.00023 Score=74.61 Aligned_cols=87 Identities=16% Similarity=0.110 Sum_probs=62.6
Q ss_pred CCCCeEEEEcCCCCHhHHHHHhc--CCCcEEEEecCCC--------------C---CcEEeccCCCC-C-CCCCceeEEE
Q 010086 115 SQSAKSLCVETQYGQDVFALKEI--GVEDSIGIFKKSS--------------K---PLVISGEGHRI-P-FDGNTFDFVF 173 (518)
Q Consensus 115 ~~~~rvLDVGcGtG~~~~~L~~~--g~~~v~gID~s~~--------------~---~l~~~~da~~L-P-f~D~SFD~V~ 173 (518)
+++.+|||++||+|..+..++.. |...|+++|+++. . ..++.+|+.++ . -..+.||+|+
T Consensus 51 ~~g~~VLDlfaGtG~~sl~aa~~~~ga~~V~avDi~~~av~~~~~N~~~Ngl~~~~v~v~~~Da~~~l~~~~~~~fD~V~ 130 (392)
T 3axs_A 51 GRPVKVADPLSASGIRAIRFLLETSCVEKAYANDISSKAIEIMKENFKLNNIPEDRYEIHGMEANFFLRKEWGFGFDYVD 130 (392)
T ss_dssp CSCEEEEESSCTTSHHHHHHHHHCSCEEEEEEECSCHHHHHHHHHHHHHTTCCGGGEEEECSCHHHHHHSCCSSCEEEEE
T ss_pred CCCCEEEECCCcccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHhCCCCceEEEEeCCHHHHHHHhhCCCCcEEE
Confidence 46789999999999998766653 4468999999741 1 23456676443 1 1246799999
Q ss_pred EcCceeeccCChHHHHHHHHhcccCCcEEEEEe
Q 010086 174 VGGARLEKASKPLDFASEIVRTLKPEGFAVVHV 206 (518)
Q Consensus 174 s~~~~l~~~~dp~~~l~Ei~RVLKPGG~lvi~~ 206 (518)
..- + -.+..++..+.+.|||||+++++.
T Consensus 131 lDP--~---g~~~~~l~~a~~~Lk~gGll~~t~ 158 (392)
T 3axs_A 131 LDP--F---GTPVPFIESVALSMKRGGILSLTA 158 (392)
T ss_dssp ECC--S---SCCHHHHHHHHHHEEEEEEEEEEE
T ss_pred ECC--C---cCHHHHHHHHHHHhCCCCEEEEEe
Confidence 854 2 124568899999999999888765
No 285
>3khk_A Type I restriction-modification system methylation subunit; structural genomics, PSI-2, protein structure initiative; 2.55A {Methanosarcina mazei}
Probab=97.04 E-value=0.0022 Score=69.89 Aligned_cols=131 Identities=11% Similarity=0.069 Sum_probs=75.9
Q ss_pred CeEEEEcCCCCHhHHHHHh----c----C--------CCcEEEEecCCC--------------CCcE--EeccCCCCC-C
Q 010086 118 AKSLCVETQYGQDVFALKE----I----G--------VEDSIGIFKKSS--------------KPLV--ISGEGHRIP-F 164 (518)
Q Consensus 118 ~rvLDVGcGtG~~~~~L~~----~----g--------~~~v~gID~s~~--------------~~l~--~~~da~~LP-f 164 (518)
.+|||.+||+|.++..+.+ . + ...++|+|+++. ...+ .++|.-..| +
T Consensus 246 ~~VlDPaCGSG~fLi~a~~~l~~~~~~~~~~~~~~~~~~~i~G~Eid~~~~~lA~~Nl~l~gi~~~i~i~~gDtL~~~~~ 325 (544)
T 3khk_A 246 GRVYDPAMGSGGFFVSSDKFIEKHANVKHYNASEQKKQISVYGQESNPTTWKLAAMNMVIRGIDFNFGKKNADSFLDDQH 325 (544)
T ss_dssp EEEEESSCTTCHHHHHHHHHHHHHHHHHTSCHHHHGGGEEEEECCCCHHHHHHHHHHHHHTTCCCBCCSSSCCTTTSCSC
T ss_pred CeEeCcccCcCcHHHHHHHHHHHhccccccchHHHhhhceEEEEeCCHHHHHHHHHHHHHhCCCcccceeccchhcCccc
Confidence 4999999999988744321 1 0 247999998741 1112 456655444 6
Q ss_pred CCCceeEEEEcCceeec-------------------------cC---Ch-HHHHHHHHhcccCCcEEEEEecCCCccC--
Q 010086 165 DGNTFDFVFVGGARLEK-------------------------AS---KP-LDFASEIVRTLKPEGFAVVHVRAKDEYS-- 213 (518)
Q Consensus 165 ~D~SFD~V~s~~~~l~~-------------------------~~---dp-~~~l~Ei~RVLKPGG~lvi~~~~~~~~s-- 213 (518)
++..||+|+++-= +.. .+ +. ..+++.+.+.|||||++++.+.+.-..+
T Consensus 326 ~~~~fD~Iv~NPP-f~~~~~~~~~~~~d~r~~~g~~~~~~~~~~~~~~~~~~Fl~~~l~~Lk~gGr~aiVlP~g~L~~~~ 404 (544)
T 3khk_A 326 PDLRADFVMTNPP-FNMKDWWHEKLADDPRWTINTNGEKRILTPPTGNANFAWMLHMLYHLAPTGSMALLLANGSMSSNT 404 (544)
T ss_dssp TTCCEEEEEECCC-SSCCSCCCGGGTTCGGGEECCC--CEECCCCTTCTHHHHHHHHHHTEEEEEEEEEEEETHHHHCCG
T ss_pred ccccccEEEECCC-cCCccccchhhhhhhhhhcCcccccccccCCCcchhHHHHHHHHHHhccCceEEEEecchhhhcCc
Confidence 7889999999642 211 11 00 1578999999999999888775432211
Q ss_pred --chhHhh-hccCccEEEEeccCC--C-CCCccceeEEEEeec
Q 010086 214 --FNSFLD-LFNSCKLVKSRDIDG--I-DSSLPYIREIVLKKE 250 (518)
Q Consensus 214 --~~~~~~-lf~~~~~v~~~~v~~--~-~~~~p~~~~vv~kK~ 250 (518)
...+++ |..++.+..+-.... | +-.+|+. .++++|.
T Consensus 405 ~~~~~iRk~Lle~~~l~aII~LP~~lF~~t~i~t~-Ilvl~K~ 446 (544)
T 3khk_A 405 NNEGEIRKTLVEQDLVECMVALPGQLFTNTQIPAC-IWFLTKD 446 (544)
T ss_dssp GGHHHHHHHHHHTTCEEEEEECCTTBCCSCSSCEE-EEEEESC
T ss_pred chHHHHHHHHHhCCcHhEEEECCCCCCCCCCCCeE-EEEEecC
Confidence 123333 345555544433221 2 2234332 4666665
No 286
>4gqb_A Protein arginine N-methyltransferase 5; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens} PDB: 4g56_A*
Probab=96.97 E-value=0.0011 Score=73.41 Aligned_cols=81 Identities=16% Similarity=0.120 Sum_probs=56.0
Q ss_pred CeEEEEcCCCCHhHHHH----HhcCC-CcEEEEecCCC---------------CCcEEeccCCCCCCCCCceeEEEEcCc
Q 010086 118 AKSLCVETQYGQDVFAL----KEIGV-EDSIGIFKKSS---------------KPLVISGEGHRIPFDGNTFDFVFVGGA 177 (518)
Q Consensus 118 ~rvLDVGcGtG~~~~~L----~~~g~-~~v~gID~s~~---------------~~l~~~~da~~LPf~D~SFD~V~s~~~ 177 (518)
..|||||||+|-++..- ++.+. .+|++|+.++. ...+++++.+++..| +.+|+|+|--
T Consensus 359 ~vVldVGaGrGpLv~~al~A~a~~~~~vkVyAVEknp~A~~a~~~v~~N~~~dkVtVI~gd~eev~LP-EKVDIIVSEw- 436 (637)
T 4gqb_A 359 QVLMVLGAGRGPLVNASLRAAKQADRRIKLYAVEKNPNAVVTLENWQFEEWGSQVTVVSSDMREWVAP-EKADIIVSEL- 436 (637)
T ss_dssp EEEEEESCTTSHHHHHHHHHHHHTTCEEEEEEEESCHHHHHHHHHHHHHTTGGGEEEEESCTTTCCCS-SCEEEEECCC-
T ss_pred cEEEEECCCCcHHHHHHHHHHHhcCCCcEEEEEECCHHHHHHHHHHHhccCCCeEEEEeCcceeccCC-cccCEEEEEc-
Confidence 46999999999885322 22221 26899998741 233678999998776 5799999854
Q ss_pred eeeccC----ChHHHHHHHHhcccCCcEE
Q 010086 178 RLEKAS----KPLDFASEIVRTLKPEGFA 202 (518)
Q Consensus 178 ~l~~~~----dp~~~l~Ei~RVLKPGG~l 202 (518)
+..+- -| .++.-..|.|||||++
T Consensus 437 -MG~fLl~E~ml-evL~Ardr~LKPgGim 463 (637)
T 4gqb_A 437 -LGSFADNELSP-ECLDGAQHFLKDDGVS 463 (637)
T ss_dssp -CBTTBGGGCHH-HHHHHHGGGEEEEEEE
T ss_pred -CcccccccCCH-HHHHHHHHhcCCCcEE
Confidence 22211 13 4667778999999974
No 287
>3ua3_A Protein arginine N-methyltransferase 5; TIM-barrel, rossmann fold, beta-barrel, symmetric arginine dimethylase, SAM binding; HET: SAH; 3.00A {Caenorhabditis elegans} PDB: 3ua4_A
Probab=96.96 E-value=0.0008 Score=75.13 Aligned_cols=84 Identities=13% Similarity=0.051 Sum_probs=58.6
Q ss_pred CCeEEEEcCCCCHhHHH-H---HhcC----------CCcEEEEecCC---------------CCCcEEeccCCCCCCC--
Q 010086 117 SAKSLCVETQYGQDVFA-L---KEIG----------VEDSIGIFKKS---------------SKPLVISGEGHRIPFD-- 165 (518)
Q Consensus 117 ~~rvLDVGcGtG~~~~~-L---~~~g----------~~~v~gID~s~---------------~~~l~~~~da~~LPf~-- 165 (518)
+..|||||||+|-++.. + +..| ..+|++||.++ ....+++++.+++.+|
T Consensus 410 ~~VVldVGaGtGpLs~~al~A~~~a~~~~~~~~~~~~~kVyAVEknp~A~~~l~~~~~Ng~~d~VtVI~gd~eev~lp~~ 489 (745)
T 3ua3_A 410 TVVIYLLGGGRGPIGTKILKSEREYNNTFRQGQESLKVKLYIVEKNPNAIVTLKYMNVRTWKRRVTIIESDMRSLPGIAK 489 (745)
T ss_dssp EEEEEEESCTTCHHHHHHHHHHHHHHHHHSTTSCCCEEEEEEEECCHHHHHHHHHHHHHTTTTCSEEEESCGGGHHHHHH
T ss_pred CcEEEEECCCCCHHHHHHHHHHHHhCccccccccccccEEEEEeCChHHHHHHHHHHhcCCCCeEEEEeCchhhcccccc
Confidence 34799999999998632 2 1122 13899999874 1244678999988774
Q ss_pred ---CCceeEEEEcCceeeccCC---hHHHHHHHHhcccCCcEE
Q 010086 166 ---GNTFDFVFVGGARLEKASK---PLDFASEIVRTLKPEGFA 202 (518)
Q Consensus 166 ---D~SFD~V~s~~~~l~~~~d---p~~~l~Ei~RVLKPGG~l 202 (518)
.+.+|+|+|-. +-.+-+ -..++.-+.|.|||||++
T Consensus 490 ~~~~ekVDIIVSEl--mGsfl~nEL~pe~Ld~v~r~Lkp~Gi~ 530 (745)
T 3ua3_A 490 DRGFEQPDIIVSEL--LGSFGDNELSPECLDGVTGFLKPTTIS 530 (745)
T ss_dssp HTTCCCCSEEEECC--CBTTBGGGSHHHHHHTTGGGSCTTCEE
T ss_pred cCCCCcccEEEEec--cccccchhccHHHHHHHHHhCCCCcEE
Confidence 67899999975 333321 124677778999999974
No 288
>3o4f_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, P biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli}
Probab=96.94 E-value=0.0034 Score=63.33 Aligned_cols=92 Identities=15% Similarity=0.157 Sum_probs=66.4
Q ss_pred CCCCeEEEEcCCCCHhHHHHHhc-CCCcEEEEecCCC-------------------C-CcEEeccCCCC-CCCCCceeEE
Q 010086 115 SQSAKSLCVETQYGQDVFALKEI-GVEDSIGIFKKSS-------------------K-PLVISGEGHRI-PFDGNTFDFV 172 (518)
Q Consensus 115 ~~~~rvLDVGcGtG~~~~~L~~~-g~~~v~gID~s~~-------------------~-~l~~~~da~~L-Pf~D~SFD~V 172 (518)
+...+||-||.|.|..+..+.+. +..+++.+|+.+. + ..++.+|+... --.+++||+|
T Consensus 82 p~pk~VLIiGgGdG~~~revlk~~~v~~v~~VEID~~Vv~~a~~~lp~~~~~~~~dpRv~v~~~Dg~~~l~~~~~~yDvI 161 (294)
T 3o4f_A 82 GHAKHVLIIGGGDGAMLREVTRHKNVESITMVEIDAGVVSFCRQYLPNHNAGSYDDPRFKLVIDDGVNFVNQTSQTFDVI 161 (294)
T ss_dssp SCCCEEEEESCTTSHHHHHHHTCTTCCEEEEEESCHHHHHHHHHHCHHHHTTGGGCTTEEEEESCTTTTTSCSSCCEEEE
T ss_pred CCCCeEEEECCCchHHHHHHHHcCCcceEEEEcCCHHHHHHHHhcCccccccccCCCcEEEEechHHHHHhhccccCCEE
Confidence 44579999999999999777664 5678999998631 1 12456776553 4467899999
Q ss_pred EEcCceeeccC-----ChHHHHHHHHhcccCCcEEEEEecC
Q 010086 173 FVGGARLEKAS-----KPLDFASEIVRTLKPEGFAVVHVRA 208 (518)
Q Consensus 173 ~s~~~~l~~~~-----dp~~~l~Ei~RVLKPGG~lvi~~~~ 208 (518)
+.-. .+-.. .-..+++.+.|.|||||+++.+.+.
T Consensus 162 i~D~--~dp~~~~~~L~t~eFy~~~~~~L~p~Gv~v~q~~s 200 (294)
T 3o4f_A 162 ISDC--TDPIGPGESLFTSAFYEGCKRCLNPGGIFVAQNGV 200 (294)
T ss_dssp EESC--CCCCCTTCCSSCCHHHHHHHHTEEEEEEEEEEEEE
T ss_pred EEeC--CCcCCCchhhcCHHHHHHHHHHhCCCCEEEEecCC
Confidence 9854 22211 1236899999999999999998653
No 289
>1m6y_A S-adenosyl-methyltransferase MRAW; SAM-dependent methyltransferase fold, protein-cofactor product complex, structural genomics, PSI; HET: SAH; 1.90A {Thermotoga maritima} SCOP: a.60.13.1 c.66.1.23 PDB: 1n2x_A*
Probab=96.92 E-value=0.00048 Score=69.67 Aligned_cols=64 Identities=14% Similarity=-0.037 Sum_probs=44.0
Q ss_pred CCCCCCeEEEEcCCCCHhHHHHHhc-CCCcEEEEecCCC--------------CCcEEeccCCCCC--CC---CCceeEE
Q 010086 113 YLSQSAKSLCVETQYGQDVFALKEI-GVEDSIGIFKKSS--------------KPLVISGEGHRIP--FD---GNTFDFV 172 (518)
Q Consensus 113 ll~~~~rvLDVGcGtG~~~~~L~~~-g~~~v~gID~s~~--------------~~l~~~~da~~LP--f~---D~SFD~V 172 (518)
-++++.++||+|||+|..+..+.+. +...|+|+|+++. ...++++|..++| ++ .++||.|
T Consensus 23 ~~~~g~~vLD~g~G~G~~s~~la~~~~~~~VigvD~d~~al~~A~~~~~~~g~~v~~v~~d~~~l~~~l~~~g~~~~D~V 102 (301)
T 1m6y_A 23 KPEDEKIILDCTVGEGGHSRAILEHCPGCRIIGIDVDSEVLRIAEEKLKEFSDRVSLFKVSYREADFLLKTLGIEKVDGI 102 (301)
T ss_dssp CCCTTCEEEETTCTTSHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHTGGGTTTEEEEECCGGGHHHHHHHTTCSCEEEE
T ss_pred CCCCCCEEEEEeCCcCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEECCHHHHHHHHHhcCCCCCCEE
Confidence 3578899999999999999887765 2369999999741 1124566666654 12 1467777
Q ss_pred EEcC
Q 010086 173 FVGG 176 (518)
Q Consensus 173 ~s~~ 176 (518)
++..
T Consensus 103 l~D~ 106 (301)
T 1m6y_A 103 LMDL 106 (301)
T ss_dssp EEEC
T ss_pred EEcC
Confidence 7643
No 290
>3lkd_A Type I restriction-modification system methyltransferase subunit; Q5M500_STRT2, STU0711, NESG, SUR80, structural genomics, PSI-2; 2.25A {Streptococcus thermophilus}
Probab=96.73 E-value=0.0041 Score=67.81 Aligned_cols=95 Identities=15% Similarity=0.117 Sum_probs=64.5
Q ss_pred CCCCeEEEEcCCCCHhHHHHHhc----CCCcEEEEecCCC-----------------CCcEEeccCCCC--C-CCCCcee
Q 010086 115 SQSAKSLCVETQYGQDVFALKEI----GVEDSIGIFKKSS-----------------KPLVISGEGHRI--P-FDGNTFD 170 (518)
Q Consensus 115 ~~~~rvLDVGcGtG~~~~~L~~~----g~~~v~gID~s~~-----------------~~l~~~~da~~L--P-f~D~SFD 170 (518)
.++.+|||.+||+|.+...+.+. +...++|+|+++. ...+.++|.-.. | +++..||
T Consensus 220 ~~~~~VlDPaCGSG~fLi~a~~~l~~~~~~~i~G~Eid~~~~~lA~~Nl~l~gi~~~~~~I~~gDtL~~d~p~~~~~~fD 299 (542)
T 3lkd_A 220 KQGFTLYDATMGSGSLLLNAKRYSRQPQTVVYFGQELNTSTYNLARMNMILHGVPIENQFLHNADTLDEDWPTQEPTNFD 299 (542)
T ss_dssp CTTCEEEETTCTTSTTGGGHHHHCSCTTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEESCTTTSCSCCSSCCCBS
T ss_pred CCCCEEeecccchhHHHHHHHHHHHhccCceEEEEECcHHHHHHHHHHHHHcCCCcCccceEecceeccccccccccccc
Confidence 46789999999999987544332 3468999998741 112557777665 4 5678999
Q ss_pred EEEEcCc-eeec------cCCh---------------HHHHHHHHhccc-CCcEEEEEecCC
Q 010086 171 FVFVGGA-RLEK------ASKP---------------LDFASEIVRTLK-PEGFAVVHVRAK 209 (518)
Q Consensus 171 ~V~s~~~-~l~~------~~dp---------------~~~l~Ei~RVLK-PGG~lvi~~~~~ 209 (518)
+|+++-= .-.+ ..++ ..+++.+.+.|| |||++++.+.+.
T Consensus 300 ~IvaNPPf~~~~~~~~~~~~d~rf~~~G~~~~~s~~~~~Fl~~~l~~Lk~~gGr~a~VlP~g 361 (542)
T 3lkd_A 300 GVLMNPPYSAKWSASSGFMDDPRFSPFGKLAPKSKADFAFLLHGYYHLKQDNGVMAIVLPHG 361 (542)
T ss_dssp EEEECCCTTCCCCCCGGGGGSTTTGGGSSCCCTTCCHHHHHHHHHHTBCTTTCEEEEEEETH
T ss_pred EEEecCCcCCccccchhhhhhhhhhhhhhcCCCchhhHHHHHHHHHHhCCCceeEEEEecch
Confidence 9998731 0111 0010 137899999999 999998877543
No 291
>3s1s_A Restriction endonuclease bpusi; PD--(D/E)XK catalytic motif, gamma-N6M-adenosine methyltrans S-adenosyl-methionine binding, hydrolase; HET: SAH; 2.35A {Bacillus pumilus}
Probab=96.68 E-value=0.015 Score=65.96 Aligned_cols=136 Identities=8% Similarity=-0.054 Sum_probs=80.0
Q ss_pred CCCCCeEEEEcCCCCHhHHHHHhc-C---CCcEEEEecCCCCC---------------------cEEeccCCCC-CCCCC
Q 010086 114 LSQSAKSLCVETQYGQDVFALKEI-G---VEDSIGIFKKSSKP---------------------LVISGEGHRI-PFDGN 167 (518)
Q Consensus 114 l~~~~rvLDVGcGtG~~~~~L~~~-g---~~~v~gID~s~~~~---------------------l~~~~da~~L-Pf~D~ 167 (518)
.+++.+|||.|||+|.++.++++. + ...++|+|+++... .+..++.... +.+..
T Consensus 319 l~~g~rVLDPaCGSG~FLIaaA~~l~ei~~~~IyGvEIDp~Al~LAK~RlNL~lN~LlhGi~~~~I~~dD~L~~~~~~~~ 398 (878)
T 3s1s_A 319 LTEDEVISDPAAGSGNLLATVSAGFNNVMPRQIWANDIETLFLELLSIRLGLLFPQLVSSNNAPTITGEDVCSLNPEDFA 398 (878)
T ss_dssp CCTTCEEEETTCTTSHHHHHHHHTSTTCCGGGEEEECSCGGGHHHHHHHHHTTSTTTCBTTBCCEEECCCGGGCCGGGGT
T ss_pred CCCCCEEEECCCCccHHHHHHHHHhcccCCCeEEEEECCHHHHHHHHHHHHHHHhhhhcCCCcceEEecchhcccccccC
Confidence 346789999999999998776653 2 24799999875210 1112233222 33567
Q ss_pred ceeEEEEcCceeeccCC----------------------------hHHHHHHHHhcccCCcEEEEEecCCCcc--C--ch
Q 010086 168 TFDFVFVGGARLEKASK----------------------------PLDFASEIVRTLKPEGFAVVHVRAKDEY--S--FN 215 (518)
Q Consensus 168 SFD~V~s~~~~l~~~~d----------------------------p~~~l~Ei~RVLKPGG~lvi~~~~~~~~--s--~~ 215 (518)
.||+|+++-=+...... -..+++.+.+.|||||++++.+.+.-.. + ..
T Consensus 399 kFDVVIgNPPYg~~~~~~~e~kd~~~r~~~g~p~~p~s~~G~~DLy~aFIe~Al~lLKpGGrLAfIlP~s~Lf~sg~~~k 478 (878)
T 3s1s_A 399 NVSVVVMNPPYVSGVTDPAIKRKFAHKIIQLTGNRPQTLFGQIGVEALFLELVTELVQDGTVISAIMPKQYLTAQGNESK 478 (878)
T ss_dssp TEEEEEECCBCCSSCCCHHHHHHHHHHHHHHHSSCCSSCSSSCCHHHHHHHHHHHHSCTTCEEEEEEETHHHHCCSHHHH
T ss_pred CCCEEEECCCccccccchhhhhhHHHHhhhhccccccccccccchHHHHHHHHHHhcCCCcEEEEEEChHHhccCChHHH
Confidence 89999997521111111 1236788999999999998887543221 1 13
Q ss_pred hHhh-hccCccEEEEeccC---CCCC-CccceeEEEEeec
Q 010086 216 SFLD-LFNSCKLVKSRDID---GIDS-SLPYIREIVLKKE 250 (518)
Q Consensus 216 ~~~~-lf~~~~~v~~~~v~---~~~~-~~p~~~~vv~kK~ 250 (518)
.+++ |..++.+..+-... .|.. ..|+ ..++++|.
T Consensus 479 kLRk~LLe~~~I~aIIdLP~~~~F~~asv~T-~ILIlrK~ 517 (878)
T 3s1s_A 479 AFREFLVGNFGLEHIFLYPREGLFEEVIKDT-VVFVGRKG 517 (878)
T ss_dssp HHHHHHTTTTCEEEEEECCBCCSSCSCBCCE-EEEEEETT
T ss_pred HHHHHHHhCCCeEEEEECCCccccCCCCCcE-EEEEEEcC
Confidence 3444 35666665554433 2532 2332 35667775
No 292
>3ll7_A Putative methyltransferase; methytransferase, structural genomics, MCSG, PSI-2, protein initiative; HET: MSE; 1.80A {Porphyromonas gingivalis}
Probab=96.64 E-value=0.00034 Score=73.77 Aligned_cols=92 Identities=15% Similarity=0.204 Sum_probs=60.3
Q ss_pred CCCCCCeEEEEcCCCCHhHHHHHhcCCCcEEEEecCCC--------------C---CcEEeccCCCC-CC-CCCceeEEE
Q 010086 113 YLSQSAKSLCVETQYGQDVFALKEIGVEDSIGIFKKSS--------------K---PLVISGEGHRI-PF-DGNTFDFVF 173 (518)
Q Consensus 113 ll~~~~rvLDVGcGtG~~~~~L~~~g~~~v~gID~s~~--------------~---~l~~~~da~~L-Pf-~D~SFD~V~ 173 (518)
.+++|.+|||+|||+|..+..|++.+ .+|+|+|+++. . ..++++|+.+. +. ++++||+|+
T Consensus 90 ~l~~g~~VLDLgcG~G~~al~LA~~g-~~V~~VD~s~~~l~~Ar~N~~~~~~gl~~i~~i~~Da~~~L~~~~~~~fDvV~ 168 (410)
T 3ll7_A 90 FIREGTKVVDLTGGLGIDFIALMSKA-SQGIYIERNDETAVAARHNIPLLLNEGKDVNILTGDFKEYLPLIKTFHPDYIY 168 (410)
T ss_dssp GSCTTCEEEESSCSSSHHHHHHHTTC-SEEEEEESCHHHHHHHHHHHHHHSCTTCEEEEEESCGGGSHHHHHHHCCSEEE
T ss_pred hcCCCCEEEEeCCCchHHHHHHHhcC-CEEEEEECCHHHHHHHHHhHHHhccCCCcEEEEECcHHHhhhhccCCCceEEE
Confidence 35568999999999999999998876 79999999741 1 23567888763 43 457899999
Q ss_pred EcCceeec-----cCChH---HHHHHHHhcccCC-cEEEEEe
Q 010086 174 VGGARLEK-----ASKPL---DFASEIVRTLKPE-GFAVVHV 206 (518)
Q Consensus 174 s~~~~l~~-----~~dp~---~~l~Ei~RVLKPG-G~lvi~~ 206 (518)
+.-. ... +-+++ --+.++.++|+.. ..+++-.
T Consensus 169 lDPP-rr~~~~grv~~led~~P~l~~~~~~l~~~~~~~~vK~ 209 (410)
T 3ll7_A 169 VDPA-RRSGADKRVYAIADCEPDLIPLATELLPFCSSILAKL 209 (410)
T ss_dssp ECCE-EC-----CCCCGGGEESCHHHHHHHHGGGSSEEEEEE
T ss_pred ECCC-CcCCCCceEEehhhcCCCHHHHHHHHHhhCCcEEEEc
Confidence 8532 111 00111 1356677766544 3455544
No 293
>3cvo_A Methyltransferase-like protein of unknown functio; rossman fold, structural genomics, joint center for structur genomics, JCSG; HET: MSE PG4; 1.80A {Silicibacter pomeroyi dss-3}
Probab=96.07 E-value=0.013 Score=55.96 Aligned_cols=82 Identities=10% Similarity=0.021 Sum_probs=55.5
Q ss_pred CCCeEEEEcCCCCHhHHHHHhcCCCcEEEEecCC------------CC------CcEEeccCCC---------------C
Q 010086 116 QSAKSLCVETQYGQDVFALKEIGVEDSIGIFKKS------------SK------PLVISGEGHR---------------I 162 (518)
Q Consensus 116 ~~~rvLDVGcGtG~~~~~L~~~g~~~v~gID~s~------------~~------~l~~~~da~~---------------L 162 (518)
+..+||++||| ..+..+++...++|+.||.++ .. ..++.+++.+ +
T Consensus 30 ~a~~VLEiGtG--ySTl~lA~~~~g~VvtvE~d~~~~~~ar~~l~~~g~~~~~~I~~~~gda~~~~~wg~p~~~~~~~~l 107 (202)
T 3cvo_A 30 EAEVILEYGSG--GSTVVAAELPGKHVTSVESDRAWARMMKAWLAANPPAEGTEVNIVWTDIGPTGDWGHPVSDAKWRSY 107 (202)
T ss_dssp HCSEEEEESCS--HHHHHHHTSTTCEEEEEESCHHHHHHHHHHHHHSCCCTTCEEEEEECCCSSBCGGGCBSSSTTGGGT
T ss_pred CCCEEEEECch--HHHHHHHHcCCCEEEEEeCCHHHHHHHHHHHHHcCCCCCCceEEEEeCchhhhcccccccchhhhhH
Confidence 55799999986 555666664137999999863 11 1234566543 2
Q ss_pred C--------C-CCCceeEEEEcCceeeccCChHHHHHHHHhcccCCcEEEEE
Q 010086 163 P--------F-DGNTFDFVFVGGARLEKASKPLDFASEIVRTLKPEGFAVVH 205 (518)
Q Consensus 163 P--------f-~D~SFD~V~s~~~~l~~~~dp~~~l~Ei~RVLKPGG~lvi~ 205 (518)
| . .+++||+||.-.. . ....+.++.+.|||||++++-
T Consensus 108 ~~~~~~i~~~~~~~~fDlIfIDg~-k-----~~~~~~~~l~~l~~GG~Iv~D 153 (202)
T 3cvo_A 108 PDYPLAVWRTEGFRHPDVVLVDGR-F-----RVGCALATAFSITRPVTLLFD 153 (202)
T ss_dssp THHHHGGGGCTTCCCCSEEEECSS-S-----HHHHHHHHHHHCSSCEEEEET
T ss_pred HHHhhhhhccccCCCCCEEEEeCC-C-----chhHHHHHHHhcCCCeEEEEe
Confidence 2 2 2478999999763 2 235677788999999999763
No 294
>2wk1_A NOVP; transferase, O-methyltransferase, novobiocin, TYLF superfamily; HET: SAH; 1.40A {Streptomyces caeruleus}
Probab=95.73 E-value=0.028 Score=56.26 Aligned_cols=105 Identities=11% Similarity=0.111 Sum_probs=69.4
Q ss_pred HHHHhhHHHHHHHHHHcCCCCCCCeEEEEcCCCCHhHHHHHh----cC--CCcEEEEecCCC------------------
Q 010086 95 IKAVNFYSSVFQDLISEGYLSQSAKSLCVETQYGQDVFALKE----IG--VEDSIGIFKKSS------------------ 150 (518)
Q Consensus 95 r~~v~~~~~l~~~L~~~gll~~~~rvLDVGcGtG~~~~~L~~----~g--~~~v~gID~s~~------------------ 150 (518)
.+....+..+++.+...+ ...+||++|+..|..+..+++ .| ..+++++|..+.
T Consensus 88 ~~r~~~L~~l~~~v~~~~---~pg~IlEiGv~~G~Sai~ma~~l~~~g~~~~kI~~~DtfeG~pe~~~~~~~~d~~~~~~ 164 (282)
T 2wk1_A 88 IKRLENIRQCVEDVIGNN---VPGDLVETGVWRGGACILMRGILRAHDVRDRTVWVADSFQGIPDVGEDGYAGDRKMALH 164 (282)
T ss_dssp HHHHHHHHHHHHHHHHTT---CCCEEEEECCTTSHHHHHHHHHHHHTTCCSCCEEEEECSSCSCCCCTTSCHHHHHHCGG
T ss_pred HHHHHHHHHHHHHHHhcC---CCCcEEEeecCchHHHHHHHHHhHhcCCCCCEEEEEECCCCCCcccccccccccccccc
Confidence 334555566666655433 346899999999998766654 22 368999995310
Q ss_pred -------------------------CCcEEeccCCC-CC-CCCCceeEEEEcCceeeccCChHHHHHHHHhcccCCcEEE
Q 010086 151 -------------------------KPLVISGEGHR-IP-FDGNTFDFVFVGGARLEKASKPLDFASEIVRTLKPEGFAV 203 (518)
Q Consensus 151 -------------------------~~l~~~~da~~-LP-f~D~SFD~V~s~~~~l~~~~dp~~~l~Ei~RVLKPGG~lv 203 (518)
...++.|++.+ || +++++||+|+.-.. +...-...+..+.+.|+|||+++
T Consensus 165 ~~~~~~~~~~~~ar~n~~~~gl~~~~I~li~Gda~etL~~~~~~~~d~vfIDaD---~y~~~~~~Le~~~p~L~pGGiIv 241 (282)
T 2wk1_A 165 RRNSVLAVSEEEVRRNFRNYDLLDEQVRFLPGWFKDTLPTAPIDTLAVLRMDGD---LYESTWDTLTNLYPKVSVGGYVI 241 (282)
T ss_dssp GGHHHHCCCHHHHHHHHHHTTCCSTTEEEEESCHHHHSTTCCCCCEEEEEECCC---SHHHHHHHHHHHGGGEEEEEEEE
T ss_pred cccccchhHHHHHHHHHHHcCCCcCceEEEEeCHHHHHhhCCCCCEEEEEEcCC---ccccHHHHHHHHHhhcCCCEEEE
Confidence 01235666543 44 56789999998653 21222467899999999999998
Q ss_pred EE
Q 010086 204 VH 205 (518)
Q Consensus 204 i~ 205 (518)
+-
T Consensus 242 ~D 243 (282)
T 2wk1_A 242 VD 243 (282)
T ss_dssp ES
T ss_pred Ec
Confidence 85
No 295
>4fzv_A Putative methyltransferase NSUN4; mterf fold, methyltransferase fold, rRNA methyltransferase, mitochondria, transferase; HET: MSE SAM; 2.00A {Homo sapiens} PDB: 4fp9_A*
Probab=95.61 E-value=0.01 Score=61.44 Aligned_cols=93 Identities=22% Similarity=0.256 Sum_probs=62.9
Q ss_pred CCCCCeEEEEcCCCCHhHHHHHhcC-CCcEEEEecCCC---------------------CCcEEeccCCCCC-CCCCcee
Q 010086 114 LSQSAKSLCVETQYGQDVFALKEIG-VEDSIGIFKKSS---------------------KPLVISGEGHRIP-FDGNTFD 170 (518)
Q Consensus 114 l~~~~rvLDVGcGtG~~~~~L~~~g-~~~v~gID~s~~---------------------~~l~~~~da~~LP-f~D~SFD 170 (518)
.++|.+|||+++|+|.-+..+++.+ ...++++|+++. ...+...|+..++ +..+.||
T Consensus 146 ~~pg~~VLD~CAaPGGKT~~la~~~~~~~l~A~D~~~~R~~~l~~~l~r~~~~~~~~~~~v~v~~~D~~~~~~~~~~~fD 225 (359)
T 4fzv_A 146 LQPGDIVLDLCAAPGGKTLALLQTGCCRNLAANDLSPSRIARLQKILHSYVPEEIRDGNQVRVTSWDGRKWGELEGDTYD 225 (359)
T ss_dssp CCTTEEEEESSCTTCHHHHHHHHTTCEEEEEEECSCHHHHHHHHHHHHHHSCTTTTTSSSEEEECCCGGGHHHHSTTCEE
T ss_pred CCCCCEEEEecCCccHHHHHHHHhcCCCcEEEEcCCHHHHHHHHHHHHHhhhhhhccCCceEEEeCchhhcchhccccCC
Confidence 6789999999999999887887764 247999998731 0113356666653 4568999
Q ss_pred EEEE----cC---ceeeccC------Ch----------HHHHHHHHhcccCCcEEEEEe
Q 010086 171 FVFV----GG---ARLEKAS------KP----------LDFASEIVRTLKPEGFAVVHV 206 (518)
Q Consensus 171 ~V~s----~~---~~l~~~~------dp----------~~~l~Ei~RVLKPGG~lvi~~ 206 (518)
.|+. ++ ..++.-+ .+ .+.+..+.+.|||||+++-.+
T Consensus 226 ~VLlDaPCSg~g~g~~r~~~~~~~~~~~~~~~~l~~lQ~~iL~~a~~~lkpGG~LVYsT 284 (359)
T 4fzv_A 226 RVLVDVPCTTDRHSLHEEENNIFKRSRKKERQILPVLQVQLLAAGLLATKPGGHVVYST 284 (359)
T ss_dssp EEEEECCCCCHHHHTTCCTTCTTSGGGHHHHHTHHHHHHHHHHHHHHTEEEEEEEEEEE
T ss_pred EEEECCccCCCCCcccccChhhhhhCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEEEEe
Confidence 9994 32 1011101 11 245677889999999987764
No 296
>3c6k_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC, phosphoprotein; HET: SPD MTA; 1.95A {Homo sapiens} PDB: 3c6m_A*
Probab=95.13 E-value=0.02 Score=59.67 Aligned_cols=91 Identities=12% Similarity=0.102 Sum_probs=60.2
Q ss_pred CCCCeEEEEcCCCCHhHHHHHhcCCCcEEEEecCCC---------CC--------------cEEeccCCCC----CCCCC
Q 010086 115 SQSAKSLCVETQYGQDVFALKEIGVEDSIGIFKKSS---------KP--------------LVISGEGHRI----PFDGN 167 (518)
Q Consensus 115 ~~~~rvLDVGcGtG~~~~~L~~~g~~~v~gID~s~~---------~~--------------l~~~~da~~L----Pf~D~ 167 (518)
.+..+||-||.|.|..+..+.+.+...++.+|+.+. +. .++.+|+... +=.++
T Consensus 204 ~~pkrVLIIGgGdG~~~revlkh~~~~V~~VEIDp~VVe~ar~yfp~~~~~~~d~pr~~rv~vii~Da~~fl~~~~~~~~ 283 (381)
T 3c6k_A 204 YTGKDVLILGGGDGGILCEIVKLKPKMVTMVEIDQMVIDGCKKYMRKTCGDVLDNLKGDCYQVLIEDCIPVLKRYAKEGR 283 (381)
T ss_dssp CTTCEEEEEECTTCHHHHHHHTTCCSEEEEEESCHHHHHHHHHHCCC----CCSSSEETTEEEEESCHHHHHHHHHHHTC
T ss_pred CCCCeEEEECCCcHHHHHHHHhcCCceeEEEccCHHHHHHHHhhchhhhhhhhccccccceeeehHHHHHHHHhhhhccC
Confidence 345799999999999998777666678999998631 10 1223443211 01245
Q ss_pred ceeEEEEcCceeec--cCCh---------HHHHHHHHhcccCCcEEEEEec
Q 010086 168 TFDFVFVGGARLEK--ASKP---------LDFASEIVRTLKPEGFAVVHVR 207 (518)
Q Consensus 168 SFD~V~s~~~~l~~--~~dp---------~~~l~Ei~RVLKPGG~lvi~~~ 207 (518)
.||+|+.-. ++. ..+| ..+++.+.|+|||||+++.+.+
T Consensus 284 ~yDvIIvDl--~D~~~s~~p~g~a~~Lft~eFy~~~~~~L~p~GVlv~Q~~ 332 (381)
T 3c6k_A 284 EFDYVINDL--TAVPISTSPEEDSTWEFLRLILDLSMKVLKQDGKYFTQGN 332 (381)
T ss_dssp CEEEEEEEC--CSSCCCCC----CHHHHHHHHHHHHHHTEEEEEEEEEEEE
T ss_pred ceeEEEECC--CCCcccCcccCcchHHHHHHHHHHHHHhcCCCCEEEEecC
Confidence 799999753 222 1122 2567889999999999998753
No 297
>2zig_A TTHA0409, putative modification methylase; methyltransferase, S- adenosylmethionine, structural genomics, NPPSFA; 2.10A {Thermus thermophilus} PDB: 2zie_A* 2zif_A
Probab=94.49 E-value=0.037 Score=55.14 Aligned_cols=46 Identities=13% Similarity=0.035 Sum_probs=37.2
Q ss_pred HHHHHHHHHcCCCCCCCeEEEEcCCCCHhHHHHHhcCCCcEEEEecCC
Q 010086 102 SSVFQDLISEGYLSQSAKSLCVETQYGQDVFALKEIGVEDSIGIFKKS 149 (518)
Q Consensus 102 ~~l~~~L~~~gll~~~~rvLDVGcGtG~~~~~L~~~g~~~v~gID~s~ 149 (518)
..+++.++...- .+++.|||++||+|..+.++.+.| .+++|+|+++
T Consensus 222 ~~l~~~~i~~~~-~~~~~vlD~f~GsGt~~~~a~~~g-~~~~g~e~~~ 267 (297)
T 2zig_A 222 LELAERLVRMFS-FVGDVVLDPFAGTGTTLIAAARWG-RRALGVELVP 267 (297)
T ss_dssp HHHHHHHHHHHC-CTTCEEEETTCTTTHHHHHHHHTT-CEEEEEESCH
T ss_pred HHHHHHHHHHhC-CCCCEEEECCCCCCHHHHHHHHcC-CeEEEEeCCH
Confidence 356666665433 688999999999999998888888 6999999874
No 298
>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*
Probab=94.23 E-value=0.038 Score=70.11 Aligned_cols=90 Identities=21% Similarity=0.164 Sum_probs=40.8
Q ss_pred CCCCeEEEEcCCCCHhHHH-HHhcC-----CCcEEEEecCCCCC-----c-----EEec--cCCC-CCCCCCceeEEEEc
Q 010086 115 SQSAKSLCVETQYGQDVFA-LKEIG-----VEDSIGIFKKSSKP-----L-----VISG--EGHR-IPFDGNTFDFVFVG 175 (518)
Q Consensus 115 ~~~~rvLDVGcGtG~~~~~-L~~~g-----~~~v~gID~s~~~~-----l-----~~~~--da~~-LPf~D~SFD~V~s~ 175 (518)
.+..+||+||.|+|..+.. +..++ +.+.+-.|+|.... . +..+ |... .+|..++||+|++.
T Consensus 1239 ~~~~~ilEigagtg~~t~~il~~l~~~~~~~~~yt~td~s~~~~~~a~~~f~~~di~~~~~d~~~~~~~~~~~ydlvia~ 1318 (2512)
T 2vz8_A 1239 SPKMKVVEVLAGDGQLYSRIPALLNTQPVMDLDYTATDRNPQALEAAQAKLEQLHVTQGQWDPANPAPGSLGKADLLVCN 1318 (2512)
T ss_dssp SSEEEEEEESCSSSCCTTTHHHHTTTSSSCEEEEEEECSSSSSTTTTTTTHHHHTEEEECCCSSCCCC-----CCEEEEE
T ss_pred CCCceEEEECCCccHHHHHHHHhhcccCcccceEEEecCChHHHHHHHHHhhhcccccccccccccccCCCCceeEEEEc
Confidence 4567999999999976533 22222 23677788874211 0 1111 2222 25677889999999
Q ss_pred CceeeccCChHHHHHHHHhcccCCcEEEEE
Q 010086 176 GARLEKASKPLDFASEIVRTLKPEGFAVVH 205 (518)
Q Consensus 176 ~~~l~~~~dp~~~l~Ei~RVLKPGG~lvi~ 205 (518)
++ +|-..+....++.+.+.|||||.+++.
T Consensus 1319 ~v-l~~t~~~~~~l~~~~~lL~p~G~l~~~ 1347 (2512)
T 2vz8_A 1319 CA-LATLGDPAVAVGNMAATLKEGGFLLLH 1347 (2512)
T ss_dssp CC---------------------CCEEEEE
T ss_pred cc-ccccccHHHHHHHHHHhcCCCcEEEEE
Confidence 97 877778888999999999999998775
No 299
>1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1
Probab=93.11 E-value=0.21 Score=50.79 Aligned_cols=93 Identities=14% Similarity=0.104 Sum_probs=59.4
Q ss_pred HHHHHcCCCCCCCeEEEEcCCC-CHhHHHHHh-cCCCcEEEEecCCCC---------CcEEeccCCC----C-CCCCCce
Q 010086 106 QDLISEGYLSQSAKSLCVETQY-GQDVFALKE-IGVEDSIGIFKKSSK---------PLVISGEGHR----I-PFDGNTF 169 (518)
Q Consensus 106 ~~L~~~gll~~~~rvLDVGcGt-G~~~~~L~~-~g~~~v~gID~s~~~---------~l~~~~da~~----L-Pf~D~SF 169 (518)
+.+.+..-++++.+||.+|+|. |..+..+++ .|...|+++|.++.. ..++.....+ + ...++.|
T Consensus 180 ~al~~~~~~~~g~~VlV~GaG~vG~~a~qlak~~Ga~~Vi~~~~~~~~~~~a~~lGa~~vi~~~~~~~~~~~~~~~~gg~ 259 (371)
T 1f8f_A 180 GACINALKVTPASSFVTWGAGAVGLSALLAAKVCGASIIIAVDIVESRLELAKQLGATHVINSKTQDPVAAIKEITDGGV 259 (371)
T ss_dssp HHHHTTTCCCTTCEEEEESCSHHHHHHHHHHHHHTCSEEEEEESCHHHHHHHHHHTCSEEEETTTSCHHHHHHHHTTSCE
T ss_pred HHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHHHcCCCEEecCCccCHHHHHHHhcCCCC
Confidence 3344555678999999999987 776655554 675579999976421 1112111111 0 1112369
Q ss_pred eEEEEcCceeeccCChHHHHHHHHhcccCCcEEEEE
Q 010086 170 DFVFVGGARLEKASKPLDFASEIVRTLKPEGFAVVH 205 (518)
Q Consensus 170 D~V~s~~~~l~~~~dp~~~l~Ei~RVLKPGG~lvi~ 205 (518)
|+|+.... ....+++..+.|||||.+++.
T Consensus 260 D~vid~~g-------~~~~~~~~~~~l~~~G~iv~~ 288 (371)
T 1f8f_A 260 NFALESTG-------SPEILKQGVDALGILGKIAVV 288 (371)
T ss_dssp EEEEECSC-------CHHHHHHHHHTEEEEEEEEEC
T ss_pred cEEEECCC-------CHHHHHHHHHHHhcCCEEEEe
Confidence 99997653 124678999999999998774
No 300
>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A*
Probab=91.36 E-value=0.57 Score=47.76 Aligned_cols=89 Identities=12% Similarity=0.094 Sum_probs=57.7
Q ss_pred HcCCCCCCCeEEEEcCCC-CHhHHHHHh-cCCCcEEEEecCCCC---------CcEEeccCCC--------CCCCCCcee
Q 010086 110 SEGYLSQSAKSLCVETQY-GQDVFALKE-IGVEDSIGIFKKSSK---------PLVISGEGHR--------IPFDGNTFD 170 (518)
Q Consensus 110 ~~gll~~~~rvLDVGcGt-G~~~~~L~~-~g~~~v~gID~s~~~---------~l~~~~da~~--------LPf~D~SFD 170 (518)
...-+++|.+||-+|+|. |..+..+++ .|...|+++|.++.. ..++.....+ ....++.||
T Consensus 176 ~~~~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~lGa~~vi~~~~~~~~~~i~~~~~~~~gg~D 255 (370)
T 4ej6_A 176 DLSGIKAGSTVAILGGGVIGLLTVQLARLAGATTVILSTRQATKRRLAEEVGATATVDPSAGDVVEAIAGPVGLVPGGVD 255 (370)
T ss_dssp HHHTCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCHHHHHHHHHHTCSEEECTTSSCHHHHHHSTTSSSTTCEE
T ss_pred HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHcCCCEEECCCCcCHHHHHHhhhhccCCCCC
Confidence 444578999999999976 666655554 675589999876311 1111110000 012234799
Q ss_pred EEEEcCceeeccCChHHHHHHHHhcccCCcEEEEE
Q 010086 171 FVFVGGARLEKASKPLDFASEIVRTLKPEGFAVVH 205 (518)
Q Consensus 171 ~V~s~~~~l~~~~dp~~~l~Ei~RVLKPGG~lvi~ 205 (518)
+|+.... -...++++.+.|+|||.+++.
T Consensus 256 vvid~~G-------~~~~~~~~~~~l~~~G~vv~~ 283 (370)
T 4ej6_A 256 VVIECAG-------VAETVKQSTRLAKAGGTVVIL 283 (370)
T ss_dssp EEEECSC-------CHHHHHHHHHHEEEEEEEEEC
T ss_pred EEEECCC-------CHHHHHHHHHHhccCCEEEEE
Confidence 9997653 134688999999999998775
No 301
>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A
Probab=91.05 E-value=0.24 Score=50.15 Aligned_cols=89 Identities=11% Similarity=0.080 Sum_probs=56.2
Q ss_pred HcCCCCCCCeEEEEcCCC-CHhHHHHHh-cCCCcEEEEecCCCC---------CcEEecc---CC----CC-CCCCCcee
Q 010086 110 SEGYLSQSAKSLCVETQY-GQDVFALKE-IGVEDSIGIFKKSSK---------PLVISGE---GH----RI-PFDGNTFD 170 (518)
Q Consensus 110 ~~gll~~~~rvLDVGcGt-G~~~~~L~~-~g~~~v~gID~s~~~---------~l~~~~d---a~----~L-Pf~D~SFD 170 (518)
...-+++|.+||-+|+|. |..+..+++ .|..+|+++|.++.. ..++..+ .. .+ ...+..||
T Consensus 165 ~~~~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~lGa~~vi~~~~~~~~~~~~~i~~~~~~g~D 244 (356)
T 1pl8_A 165 RRGGVTLGHKVLVCGAGPIGMVTLLVAKAMGAAQVVVTDLSATRLSKAKEIGADLVLQISKESPQEIARKVEGQLGCKPE 244 (356)
T ss_dssp HHHTCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTTCSEEEECSSCCHHHHHHHHHHHHTSCCS
T ss_pred HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhCCCEEEcCcccccchHHHHHHHHhCCCCC
Confidence 344578999999999986 776655554 675589999976421 1111111 00 00 00014689
Q ss_pred EEEEcCceeeccCChHHHHHHHHhcccCCcEEEEE
Q 010086 171 FVFVGGARLEKASKPLDFASEIVRTLKPEGFAVVH 205 (518)
Q Consensus 171 ~V~s~~~~l~~~~dp~~~l~Ei~RVLKPGG~lvi~ 205 (518)
+|+.... -...+++..+.|+|||+++..
T Consensus 245 ~vid~~g-------~~~~~~~~~~~l~~~G~iv~~ 272 (356)
T 1pl8_A 245 VTIECTG-------AEASIQAGIYATRSGGTLVLV 272 (356)
T ss_dssp EEEECSC-------CHHHHHHHHHHSCTTCEEEEC
T ss_pred EEEECCC-------ChHHHHHHHHHhcCCCEEEEE
Confidence 9997653 124578899999999998774
No 302
>3ufb_A Type I restriction-modification system methyltran subunit; methyltransferase activity, transferase; 1.80A {Vibrio vulnificus}
Probab=91.02 E-value=0.74 Score=49.77 Aligned_cols=135 Identities=16% Similarity=0.140 Sum_probs=75.5
Q ss_pred CCCCCeEEEEcCCCCHhHHHHH----hcC----------CCcEEEEecCCC---------------CCcEEeccCCCCCC
Q 010086 114 LSQSAKSLCVETQYGQDVFALK----EIG----------VEDSIGIFKKSS---------------KPLVISGEGHRIPF 164 (518)
Q Consensus 114 l~~~~rvLDVGcGtG~~~~~L~----~~g----------~~~v~gID~s~~---------------~~l~~~~da~~LPf 164 (518)
..++.+|+|-+||+|.+..... +.+ ...++|+|+.+. .+.+..+|.-..|+
T Consensus 215 p~~~~~I~DPacGsGgfL~~a~~~l~~~~~~~~~~~~~~~~~i~G~E~~~~~~~la~mNl~lhg~~~~~I~~~dtL~~~~ 294 (530)
T 3ufb_A 215 PQLGESVLDPACGTGGFLVEAFEHLERQCKTVEDREVLQESSIFGGEAKSLPYLLVQMNLLLHGLEYPRIDPENSLRFPL 294 (530)
T ss_dssp CCTTCCEEETTCTTTHHHHHHHHHHHTTCCSHHHHHHHHTCCEEEECCSHHHHHHHHHHHHHHTCSCCEEECSCTTCSCG
T ss_pred cCCCCEEEeCCCCcchHHHHHHHHHHHhccchhHHHHHhhhhhhhhhccHHHHHHHHHHHHhcCCccccccccccccCch
Confidence 3567899999999999874332 111 135899998641 23344566554443
Q ss_pred C----CCceeEEEEcCcee--ec-------c------CCh-HHHHHHHHhccc-------CCcEEEEEecCCCccCc---
Q 010086 165 D----GNTFDFVFVGGARL--EK-------A------SKP-LDFASEIVRTLK-------PEGFAVVHVRAKDEYSF--- 214 (518)
Q Consensus 165 ~----D~SFD~V~s~~~~l--~~-------~------~dp-~~~l~Ei~RVLK-------PGG~lvi~~~~~~~~s~--- 214 (518)
. +..||+|+++-= | .+ . .+. ..+++.+.+.|| |||++++.+.++-.++.
T Consensus 295 ~~~~~~~~fD~Il~NPP-f~~~~~~~~~~~~~~~~~~~~~~~~Fl~~~l~~Lk~~~~~l~~gGr~avVlP~g~Lf~~~~~ 373 (530)
T 3ufb_A 295 REMGDKDRVDVILTNPP-FGGEEEKGILGNFPEDMQTAETAMLFLQLIMRKLKRPGHGSDNGGRAAVVVPNGTLFSDGIS 373 (530)
T ss_dssp GGCCGGGCBSEEEECCC-SSCBCCHHHHTTSCGGGCCCBHHHHHHHHHHHHBCCTTSSSSSCCEEEEEEEHHHHHCCTHH
T ss_pred hhhcccccceEEEecCC-CCccccccccccCchhcccchhHHHHHHHHHHHhhhhhhccCCCceEEEEecchhhhccchH
Confidence 2 457999999752 2 11 0 011 135678888887 79999888754322111
Q ss_pred hhHhh-hccCccEEEEecc--CCC-C-CCccceeEEEEeec
Q 010086 215 NSFLD-LFNSCKLVKSRDI--DGI-D-SSLPYIREIVLKKE 250 (518)
Q Consensus 215 ~~~~~-lf~~~~~v~~~~v--~~~-~-~~~p~~~~vv~kK~ 250 (518)
..+++ |..++.+..+-.. +.| . -.+|+. .++++|+
T Consensus 374 ~~iRk~Lle~~~l~aII~LP~~~F~~~tgi~t~-Il~~~K~ 413 (530)
T 3ufb_A 374 ARIKEELLKNFNLHTIVRLPEGVFAPYTDIAGN-LLFFDRS 413 (530)
T ss_dssp HHHHHHHHHHSEEEEEEECCTTTTTTTCCCCEE-EEEEESS
T ss_pred HHHHHHHhhcCEEEEEEECCcccCcCCCCCcEE-EEEEECC
Confidence 12322 3455655554332 113 2 124443 4667765
No 303
>1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A*
Probab=90.84 E-value=0.35 Score=49.26 Aligned_cols=94 Identities=11% Similarity=0.070 Sum_probs=59.0
Q ss_pred HHHHHHcCCCCCCCeEEEEcCCC-CHhHHHHHh-cCCCcEEEEecCCCCC---------cEEeccC--CCC-----CCCC
Q 010086 105 FQDLISEGYLSQSAKSLCVETQY-GQDVFALKE-IGVEDSIGIFKKSSKP---------LVISGEG--HRI-----PFDG 166 (518)
Q Consensus 105 ~~~L~~~gll~~~~rvLDVGcGt-G~~~~~L~~-~g~~~v~gID~s~~~~---------l~~~~da--~~L-----Pf~D 166 (518)
++.+....-+++|++||-+|+|. |..+..+++ .|..+|+++|.++... .++.... .++ ...+
T Consensus 184 ~~~l~~~~~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~lGa~~vi~~~~~~~~~~~~v~~~~~ 263 (376)
T 1e3i_A 184 YGAAINTAKVTPGSTCAVFGLGCVGLSAIIGCKIAGASRIIAIDINGEKFPKAKALGATDCLNPRELDKPVQDVITELTA 263 (376)
T ss_dssp HHHHHTTSCCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHTTCSEEECGGGCSSCHHHHHHHHHT
T ss_pred HHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHhCCcEEEccccccchHHHHHHHHhC
Confidence 33444556688999999999876 666655554 6755899999764211 1111110 000 0112
Q ss_pred CceeEEEEcCceeeccCChHHHHHHHHhcccCC-cEEEEE
Q 010086 167 NTFDFVFVGGARLEKASKPLDFASEIVRTLKPE-GFAVVH 205 (518)
Q Consensus 167 ~SFD~V~s~~~~l~~~~dp~~~l~Ei~RVLKPG-G~lvi~ 205 (518)
+.+|+|+.... -...+++..+.|+|| |.+++.
T Consensus 264 ~g~Dvvid~~G-------~~~~~~~~~~~l~~~~G~iv~~ 296 (376)
T 1e3i_A 264 GGVDYSLDCAG-------TAQTLKAAVDCTVLGWGSCTVV 296 (376)
T ss_dssp SCBSEEEESSC-------CHHHHHHHHHTBCTTTCEEEEC
T ss_pred CCccEEEECCC-------CHHHHHHHHHHhhcCCCEEEEE
Confidence 36999997653 124678999999999 998764
No 304
>3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana}
Probab=90.76 E-value=0.27 Score=50.21 Aligned_cols=93 Identities=14% Similarity=0.130 Sum_probs=59.9
Q ss_pred HHHHHcCCCCCCCeEEEEcCCC-CHhHHHHHh-cCCCcEEEEecCCCC---------CcEEecc--CCCC-----CCCCC
Q 010086 106 QDLISEGYLSQSAKSLCVETQY-GQDVFALKE-IGVEDSIGIFKKSSK---------PLVISGE--GHRI-----PFDGN 167 (518)
Q Consensus 106 ~~L~~~gll~~~~rvLDVGcGt-G~~~~~L~~-~g~~~v~gID~s~~~---------~l~~~~d--a~~L-----Pf~D~ 167 (518)
+.+.....++++.+||-+|+|. |..+..+++ .|..+|+++|.++.. ..++... ..++ ...++
T Consensus 183 ~al~~~~~~~~g~~VlV~GaG~vG~~a~q~a~~~Ga~~Vi~~~~~~~~~~~a~~lGa~~vi~~~~~~~~~~~~i~~~~~g 262 (378)
T 3uko_A 183 GAVWNTAKVEPGSNVAIFGLGTVGLAVAEGAKTAGASRIIGIDIDSKKYETAKKFGVNEFVNPKDHDKPIQEVIVDLTDG 262 (378)
T ss_dssp HHHHTTTCCCTTCCEEEECCSHHHHHHHHHHHHHTCSCEEEECSCTTHHHHHHTTTCCEEECGGGCSSCHHHHHHHHTTS
T ss_pred HHHHhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHcCCcEEEccccCchhHHHHHHHhcCC
Confidence 3355566788999999999976 666655554 675589999977531 1111111 0100 01233
Q ss_pred ceeEEEEcCceeeccCChHHHHHHHHhcccCC-cEEEEE
Q 010086 168 TFDFVFVGGARLEKASKPLDFASEIVRTLKPE-GFAVVH 205 (518)
Q Consensus 168 SFD~V~s~~~~l~~~~dp~~~l~Ei~RVLKPG-G~lvi~ 205 (518)
.||+|+.... -...+.+..+.|+|| |++++.
T Consensus 263 g~D~vid~~g-------~~~~~~~~~~~l~~g~G~iv~~ 294 (378)
T 3uko_A 263 GVDYSFECIG-------NVSVMRAALECCHKGWGTSVIV 294 (378)
T ss_dssp CBSEEEECSC-------CHHHHHHHHHTBCTTTCEEEEC
T ss_pred CCCEEEECCC-------CHHHHHHHHHHhhccCCEEEEE
Confidence 6999997653 124678999999997 998775
No 305
>2zig_A TTHA0409, putative modification methylase; methyltransferase, S- adenosylmethionine, structural genomics, NPPSFA; 2.10A {Thermus thermophilus} PDB: 2zie_A* 2zif_A
Probab=90.41 E-value=0.098 Score=52.04 Aligned_cols=54 Identities=19% Similarity=0.238 Sum_probs=36.2
Q ss_pred EEeccCCC-CC-CCCCceeEEEEcCceeec-------------------cCChHHHHHHHHhcccCCcEEEEEec
Q 010086 154 VISGEGHR-IP-FDGNTFDFVFVGGARLEK-------------------ASKPLDFASEIVRTLKPEGFAVVHVR 207 (518)
Q Consensus 154 ~~~~da~~-LP-f~D~SFD~V~s~~~~l~~-------------------~~dp~~~l~Ei~RVLKPGG~lvi~~~ 207 (518)
++++|..+ ++ +++++||+|++.-=+... +......++|+.|+|||||.+++.++
T Consensus 24 i~~gD~~~~l~~l~~~s~DlIvtdPPY~~~~~y~~~~~~~~~~~~~~~~l~~l~~~~~~~~rvLk~~G~l~i~~~ 98 (297)
T 2zig_A 24 LHVGDAREVLASFPEASVHLVVTSPPYWTLKRYEDTPGQLGHIEDYEAFLDELDRVWREVFRLLVPGGRLVIVVG 98 (297)
T ss_dssp EEESCHHHHHTTSCTTCEEEEEECCCCCCCC-------CCHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred EEECcHHHHHhhCCCCceeEEEECCCCCCccccCCChhhhcccccHHHHHHHHHHHHHHHHHHcCCCcEEEEEEC
Confidence 45677655 33 578899999987521111 00123467899999999999988765
No 306
>1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A*
Probab=90.20 E-value=0.31 Score=49.54 Aligned_cols=93 Identities=11% Similarity=0.112 Sum_probs=58.9
Q ss_pred HHHHHcCCCCCCCeEEEEcCCC-CHhHHHHHh-cCCCcEEEEecCCCC---------CcEEeccC--CCC-----CCCCC
Q 010086 106 QDLISEGYLSQSAKSLCVETQY-GQDVFALKE-IGVEDSIGIFKKSSK---------PLVISGEG--HRI-----PFDGN 167 (518)
Q Consensus 106 ~~L~~~gll~~~~rvLDVGcGt-G~~~~~L~~-~g~~~v~gID~s~~~---------~l~~~~da--~~L-----Pf~D~ 167 (518)
+.+....-+++|++||-+|+|. |..+..+++ .|..+|+++|.++.. ..++.... .++ ...++
T Consensus 181 ~~l~~~~~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~lGa~~vi~~~~~~~~~~~~i~~~t~g 260 (373)
T 1p0f_A 181 GAAVNTAKVTPGSTCAVFGLGGVGFSAIVGCKAAGASRIIGVGTHKDKFPKAIELGATECLNPKDYDKPIYEVICEKTNG 260 (373)
T ss_dssp HHHHTTTCCCTTCEEEEECCSHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHHHTTCSEEECGGGCSSCHHHHHHHHTTS
T ss_pred HHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHHHcCCcEEEecccccchHHHHHHHHhCC
Confidence 3344556688999999999876 666655554 675589999976421 11111110 000 01123
Q ss_pred ceeEEEEcCceeeccCChHHHHHHHHhcccCC-cEEEEE
Q 010086 168 TFDFVFVGGARLEKASKPLDFASEIVRTLKPE-GFAVVH 205 (518)
Q Consensus 168 SFD~V~s~~~~l~~~~dp~~~l~Ei~RVLKPG-G~lvi~ 205 (518)
.||+|+.... -...+++..+.|+|| |.+++.
T Consensus 261 g~Dvvid~~g-------~~~~~~~~~~~l~~~~G~iv~~ 292 (373)
T 1p0f_A 261 GVDYAVECAG-------RIETMMNALQSTYCGSGVTVVL 292 (373)
T ss_dssp CBSEEEECSC-------CHHHHHHHHHTBCTTTCEEEEC
T ss_pred CCCEEEECCC-------CHHHHHHHHHHHhcCCCEEEEE
Confidence 6999997653 124678999999999 998764
No 307
>2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida}
Probab=90.19 E-value=0.64 Score=47.77 Aligned_cols=99 Identities=10% Similarity=0.017 Sum_probs=60.6
Q ss_pred HHHHHHcCCCCCCCeEEEEcCCC-CHhHHHHHh-cCCCcEEEEecCCCC--------CcEEeccCCCC------CC-CCC
Q 010086 105 FQDLISEGYLSQSAKSLCVETQY-GQDVFALKE-IGVEDSIGIFKKSSK--------PLVISGEGHRI------PF-DGN 167 (518)
Q Consensus 105 ~~~L~~~gll~~~~rvLDVGcGt-G~~~~~L~~-~g~~~v~gID~s~~~--------~l~~~~da~~L------Pf-~D~ 167 (518)
++-+ ...-+++|++||.+|+|. |..+..+++ .|..+|+++|.++.. ..++.....+. .. +..
T Consensus 175 ~~al-~~~~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~lGa~~i~~~~~~~~~~~~~~~~~g~ 253 (398)
T 2dph_A 175 FHGC-VSAGVKPGSHVYIAGAGPVGRCAAAGARLLGAACVIVGDQNPERLKLLSDAGFETIDLRNSAPLRDQIDQILGKP 253 (398)
T ss_dssp HHHH-HHTTCCTTCEEEEECCSHHHHHHHHHHHHHTCSEEEEEESCHHHHHHHHTTTCEEEETTSSSCHHHHHHHHHSSS
T ss_pred HHHH-HHcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHcCCcEEcCCCcchHHHHHHHHhCCC
Confidence 3344 445678999999999987 777655554 675589999976321 11121111110 00 122
Q ss_pred ceeEEEEcCceeecc--------CChHHHHHHHHhcccCCcEEEEE
Q 010086 168 TFDFVFVGGARLEKA--------SKPLDFASEIVRTLKPEGFAVVH 205 (518)
Q Consensus 168 SFD~V~s~~~~l~~~--------~dp~~~l~Ei~RVLKPGG~lvi~ 205 (518)
.||+|+.... -... ..+...++++.+.|||||++++.
T Consensus 254 g~Dvvid~~g-~~~~~~~~~~~~~~~~~~~~~~~~~l~~gG~iv~~ 298 (398)
T 2dph_A 254 EVDCGVDAVG-FEAHGLGDEANTETPNGALNSLFDVVRAGGAIGIP 298 (398)
T ss_dssp CEEEEEECSC-TTCBCSGGGTTSBCTTHHHHHHHHHEEEEEEEECC
T ss_pred CCCEEEECCC-CccccccccccccccHHHHHHHHHHHhcCCEEEEe
Confidence 6999997653 2110 01335789999999999998764
No 308
>1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1
Probab=90.16 E-value=0.33 Score=49.36 Aligned_cols=92 Identities=10% Similarity=0.083 Sum_probs=58.0
Q ss_pred HHHHcCCCCCCCeEEEEcCCC-CHhHHHHHh-cCCCcEEEEecCCCCC---------cEEeccC--CCC-----CCCCCc
Q 010086 107 DLISEGYLSQSAKSLCVETQY-GQDVFALKE-IGVEDSIGIFKKSSKP---------LVISGEG--HRI-----PFDGNT 168 (518)
Q Consensus 107 ~L~~~gll~~~~rvLDVGcGt-G~~~~~L~~-~g~~~v~gID~s~~~~---------l~~~~da--~~L-----Pf~D~S 168 (518)
.+....-+++|++||-+|+|. |..+..+++ .|..+|+++|.++... .++.... .++ ...++.
T Consensus 183 ~l~~~~~~~~g~~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~~~~~~~~~g 262 (374)
T 1cdo_A 183 AAVNTAKVEPGSTCAVFGLGAVGLAAVMGCHSAGAKRIIAVDLNPDKFEKAKVFGATDFVNPNDHSEPISQVLSKMTNGG 262 (374)
T ss_dssp HHHTTTCCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHTTCCEEECGGGCSSCHHHHHHHHHTSC
T ss_pred HHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHhCCceEEeccccchhHHHHHHHHhCCC
Confidence 344556678999999999876 666655554 6755899999764211 1111110 000 011236
Q ss_pred eeEEEEcCceeeccCChHHHHHHHHhcccCC-cEEEEE
Q 010086 169 FDFVFVGGARLEKASKPLDFASEIVRTLKPE-GFAVVH 205 (518)
Q Consensus 169 FD~V~s~~~~l~~~~dp~~~l~Ei~RVLKPG-G~lvi~ 205 (518)
+|+|+.... ....+++..+.|||| |.+++.
T Consensus 263 ~D~vid~~g-------~~~~~~~~~~~l~~~~G~iv~~ 293 (374)
T 1cdo_A 263 VDFSLECVG-------NVGVMRNALESCLKGWGVSVLV 293 (374)
T ss_dssp BSEEEECSC-------CHHHHHHHHHTBCTTTCEEEEC
T ss_pred CCEEEECCC-------CHHHHHHHHHHhhcCCcEEEEE
Confidence 999997653 124678999999999 998764
No 309
>1wg8_A Predicted S-adenosylmethionine-dependent methyltransferase; S-adenosyl-methyltransferase, MRAW; HET: SAM; 2.00A {Thermus thermophilus} SCOP: a.60.13.1 c.66.1.23
Probab=90.05 E-value=0.22 Score=49.92 Aligned_cols=43 Identities=12% Similarity=0.034 Sum_probs=33.8
Q ss_pred HHHHHcCCCCCCCeEEEEcCCCCHhHHHHHhcCCCcEEEEecCC
Q 010086 106 QDLISEGYLSQSAKSLCVETQYGQDVFALKEIGVEDSIGIFKKS 149 (518)
Q Consensus 106 ~~L~~~gll~~~~rvLDVGcGtG~~~~~L~~~g~~~v~gID~s~ 149 (518)
+++++.-.+++++.+||.+||.|..+..+.+.+ ..|+|+|.++
T Consensus 12 ~e~le~L~~~~gg~~VD~T~G~GGHS~~il~~~-g~VigiD~Dp 54 (285)
T 1wg8_A 12 QEALDLLAVRPGGVYVDATLGGAGHARGILERG-GRVIGLDQDP 54 (285)
T ss_dssp HHHHHHHTCCTTCEEEETTCTTSHHHHHHHHTT-CEEEEEESCH
T ss_pred HHHHHhhCCCCCCEEEEeCCCCcHHHHHHHHCC-CEEEEEeCCH
Confidence 333433346789999999999999998887764 6999999864
No 310
>1kol_A Formaldehyde dehydrogenase; oxidoreductase; HET: NAD; 1.65A {Pseudomonas putida} SCOP: b.35.1.2 c.2.1.1
Probab=90.03 E-value=0.22 Score=51.15 Aligned_cols=94 Identities=10% Similarity=0.026 Sum_probs=60.1
Q ss_pred cCCCCCCCeEEEEcCCC-CHhHHHHHh-cCCCcEEEEecCCCC--------CcEEeccCCC-----C-CC-CCCceeEEE
Q 010086 111 EGYLSQSAKSLCVETQY-GQDVFALKE-IGVEDSIGIFKKSSK--------PLVISGEGHR-----I-PF-DGNTFDFVF 173 (518)
Q Consensus 111 ~gll~~~~rvLDVGcGt-G~~~~~L~~-~g~~~v~gID~s~~~--------~l~~~~da~~-----L-Pf-~D~SFD~V~ 173 (518)
..-+++|.+||-+|+|. |..+..+++ .|...|+++|.++.. ...+.....+ + .. ....+|+|+
T Consensus 180 ~~~~~~g~~VlV~GaG~vG~~aiqlAk~~Ga~~Vi~~~~~~~~~~~a~~lGa~~i~~~~~~~~~~~v~~~t~g~g~Dvvi 259 (398)
T 1kol_A 180 TAGVGPGSTVYVAGAGPVGLAAAASARLLGAAVVIVGDLNPARLAHAKAQGFEIADLSLDTPLHEQIAALLGEPEVDCAV 259 (398)
T ss_dssp HTTCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTTCEEEETTSSSCHHHHHHHHHSSSCEEEEE
T ss_pred HcCCCCCCEEEEECCcHHHHHHHHHHHHCCCCeEEEEcCCHHHHHHHHHcCCcEEccCCcchHHHHHHHHhCCCCCCEEE
Confidence 44578999999999887 777766655 675579999976421 1111111100 0 00 123699999
Q ss_pred EcCcee---------eccCChHHHHHHHHhcccCCcEEEEE
Q 010086 174 VGGARL---------EKASKPLDFASEIVRTLKPEGFAVVH 205 (518)
Q Consensus 174 s~~~~l---------~~~~dp~~~l~Ei~RVLKPGG~lvi~ 205 (518)
.... - .|.+++...+++..+.|||||.+++.
T Consensus 260 d~~G-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~iv~~ 299 (398)
T 1kol_A 260 DAVG-FEARGHGHEGAKHEAPATVLNSLMQVTRVAGKIGIP 299 (398)
T ss_dssp ECCC-TTCBCSSTTGGGSBCTTHHHHHHHHHEEEEEEEEEC
T ss_pred ECCC-CcccccccccccccchHHHHHHHHHHHhcCCEEEEe
Confidence 7653 1 13345556889999999999998764
No 311
>1g60_A Adenine-specific methyltransferase MBOIIA; structural genomics, DNA methylation, S- adenosylmethionine, PSI, protein structure initiative; HET: SAM; 1.74A {Moraxella bovis} SCOP: c.66.1.11
Probab=89.76 E-value=0.31 Score=47.36 Aligned_cols=45 Identities=16% Similarity=0.201 Sum_probs=36.8
Q ss_pred HHHHHHHHcCCCCCCCeEEEEcCCCCHhHHHHHhcCCCcEEEEecCC
Q 010086 103 SVFQDLISEGYLSQSAKSLCVETQYGQDVFALKEIGVEDSIGIFKKS 149 (518)
Q Consensus 103 ~l~~~L~~~gll~~~~rvLDVGcGtG~~~~~L~~~g~~~v~gID~s~ 149 (518)
.+++.++... ..+++.|||..||+|..+.+..+.| .+++|+|+++
T Consensus 200 ~l~~~~i~~~-~~~~~~vlD~f~GsGtt~~~a~~~g-r~~ig~e~~~ 244 (260)
T 1g60_A 200 DLIERIIRAS-SNPNDLVLDCFMGSGTTAIVAKKLG-RNFIGCDMNA 244 (260)
T ss_dssp HHHHHHHHHH-CCTTCEEEESSCTTCHHHHHHHHTT-CEEEEEESCH
T ss_pred HHHHHHHHHh-CCCCCEEEECCCCCCHHHHHHHHcC-CeEEEEeCCH
Confidence 5666666553 4789999999999999998888888 7999999864
No 312
>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}
Probab=89.73 E-value=0.64 Score=46.75 Aligned_cols=81 Identities=10% Similarity=0.060 Sum_probs=55.5
Q ss_pred CCCCCCeEEEEcCCC-CHhHHHHHh-cCCCcEEEEecCCCCC---------cEEeccCCCCCCCCCceeEEEEcCceeec
Q 010086 113 YLSQSAKSLCVETQY-GQDVFALKE-IGVEDSIGIFKKSSKP---------LVISGEGHRIPFDGNTFDFVFVGGARLEK 181 (518)
Q Consensus 113 ll~~~~rvLDVGcGt-G~~~~~L~~-~g~~~v~gID~s~~~~---------l~~~~da~~LPf~D~SFD~V~s~~~~l~~ 181 (518)
-+++|++||-+|+|. |..+..+++ .| .+|++++.++... .++ .+... +.. .+|+|+.... -.
T Consensus 173 ~~~~g~~VlV~GaG~vG~~a~qla~~~G-a~Vi~~~~~~~~~~~~~~lGa~~v~-~~~~~--~~~-~~D~vid~~g-~~- 245 (348)
T 3two_A 173 KVTKGTKVGVAGFGGLGSMAVKYAVAMG-AEVSVFARNEHKKQDALSMGVKHFY-TDPKQ--CKE-ELDFIISTIP-TH- 245 (348)
T ss_dssp TCCTTCEEEEESCSHHHHHHHHHHHHTT-CEEEEECSSSTTHHHHHHTTCSEEE-SSGGG--CCS-CEEEEEECCC-SC-
T ss_pred CCCCCCEEEEECCcHHHHHHHHHHHHCC-CeEEEEeCCHHHHHHHHhcCCCeec-CCHHH--Hhc-CCCEEEECCC-cH-
Confidence 578999999999986 776655554 57 5899999875321 122 22222 222 7999997653 11
Q ss_pred cCChHHHHHHHHhcccCCcEEEEE
Q 010086 182 ASKPLDFASEIVRTLKPEGFAVVH 205 (518)
Q Consensus 182 ~~dp~~~l~Ei~RVLKPGG~lvi~ 205 (518)
..+++..+.|+|||.+++.
T Consensus 246 -----~~~~~~~~~l~~~G~iv~~ 264 (348)
T 3two_A 246 -----YDLKDYLKLLTYNGDLALV 264 (348)
T ss_dssp -----CCHHHHHTTEEEEEEEEEC
T ss_pred -----HHHHHHHHHHhcCCEEEEE
Confidence 2477889999999998875
No 313
>2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A*
Probab=89.47 E-value=0.36 Score=49.06 Aligned_cols=93 Identities=15% Similarity=0.135 Sum_probs=58.7
Q ss_pred HHHHHcCCCCCCCeEEEEcCCC-CHhHHHHHh-cCCCcEEEEecCCCCC---------cEEeccC--CCC-----CCCCC
Q 010086 106 QDLISEGYLSQSAKSLCVETQY-GQDVFALKE-IGVEDSIGIFKKSSKP---------LVISGEG--HRI-----PFDGN 167 (518)
Q Consensus 106 ~~L~~~gll~~~~rvLDVGcGt-G~~~~~L~~-~g~~~v~gID~s~~~~---------l~~~~da--~~L-----Pf~D~ 167 (518)
+.+....-+++|++||-+|+|. |..+..+++ .|..+|+++|.++... .++.... .++ ...++
T Consensus 180 ~~l~~~~~~~~g~~VlV~GaG~vG~~avqla~~~Ga~~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~~v~~~~~~ 259 (373)
T 2fzw_A 180 GAAVNTAKLEPGSVCAVFGLGGVGLAVIMGCKVAGASRIIGVDINKDKFARAKEFGATECINPQDFSKPIQEVLIEMTDG 259 (373)
T ss_dssp HHHHTTTCCCTTCEEEEECCSHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHHHHTCSEEECGGGCSSCHHHHHHHHTTS
T ss_pred HHHHhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHcCCceEeccccccccHHHHHHHHhCC
Confidence 3344556678999999999876 666655544 6755899999764211 1111110 000 01123
Q ss_pred ceeEEEEcCceeeccCChHHHHHHHHhcccCC-cEEEEE
Q 010086 168 TFDFVFVGGARLEKASKPLDFASEIVRTLKPE-GFAVVH 205 (518)
Q Consensus 168 SFD~V~s~~~~l~~~~dp~~~l~Ei~RVLKPG-G~lvi~ 205 (518)
.+|+|+.... ....+++..+.|+|| |.+++.
T Consensus 260 g~D~vid~~g-------~~~~~~~~~~~l~~~~G~iv~~ 291 (373)
T 2fzw_A 260 GVDYSFECIG-------NVKVMRAALEACHKGWGVSVVV 291 (373)
T ss_dssp CBSEEEECSC-------CHHHHHHHHHTBCTTTCEEEEC
T ss_pred CCCEEEECCC-------cHHHHHHHHHhhccCCcEEEEE
Confidence 6999997653 124678999999999 998764
No 314
>2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ...
Probab=89.18 E-value=0.42 Score=48.62 Aligned_cols=93 Identities=16% Similarity=0.171 Sum_probs=58.5
Q ss_pred HHHHHcCCCCCCCeEEEEcCCC-CHhHHHHHh-cCCCcEEEEecCCCC---------CcEEeccC--CCC-----CCCCC
Q 010086 106 QDLISEGYLSQSAKSLCVETQY-GQDVFALKE-IGVEDSIGIFKKSSK---------PLVISGEG--HRI-----PFDGN 167 (518)
Q Consensus 106 ~~L~~~gll~~~~rvLDVGcGt-G~~~~~L~~-~g~~~v~gID~s~~~---------~l~~~~da--~~L-----Pf~D~ 167 (518)
+.+....-++++++||-+|+|. |..+..+++ .|..+|+++|.++.. ..++.... .++ ...++
T Consensus 181 ~~l~~~~~~~~g~~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~~~~~~~~~ 260 (374)
T 2jhf_A 181 GSAVKVAKVTQGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGATECVNPQDYKKPIQEVLTEMSNG 260 (374)
T ss_dssp HHHHTTTCCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHTTCSEEECGGGCSSCHHHHHHHHTTS
T ss_pred HHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHhCCceEecccccchhHHHHHHHHhCC
Confidence 3344556678999999999876 666655554 674489999976421 11111110 000 01123
Q ss_pred ceeEEEEcCceeeccCChHHHHHHHHhcccCC-cEEEEE
Q 010086 168 TFDFVFVGGARLEKASKPLDFASEIVRTLKPE-GFAVVH 205 (518)
Q Consensus 168 SFD~V~s~~~~l~~~~dp~~~l~Ei~RVLKPG-G~lvi~ 205 (518)
.+|+|+.... ....+++..+.|||| |.+++.
T Consensus 261 g~D~vid~~g-------~~~~~~~~~~~l~~~~G~iv~~ 292 (374)
T 2jhf_A 261 GVDFSFEVIG-------RLDTMVTALSCCQEAYGVSVIV 292 (374)
T ss_dssp CBSEEEECSC-------CHHHHHHHHHHBCTTTCEEEEC
T ss_pred CCcEEEECCC-------CHHHHHHHHHHhhcCCcEEEEe
Confidence 6999997653 124678899999999 998764
No 315
>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa}
Probab=89.14 E-value=0.33 Score=49.08 Aligned_cols=89 Identities=12% Similarity=0.010 Sum_probs=56.2
Q ss_pred HcCCCCCCCeEEEEcCCC-CHhHHHHHh-cCCCcEEEEecCCCCC--------cEE--ecc---CCC----C--CCCCCc
Q 010086 110 SEGYLSQSAKSLCVETQY-GQDVFALKE-IGVEDSIGIFKKSSKP--------LVI--SGE---GHR----I--PFDGNT 168 (518)
Q Consensus 110 ~~gll~~~~rvLDVGcGt-G~~~~~L~~-~g~~~v~gID~s~~~~--------l~~--~~d---a~~----L--Pf~D~S 168 (518)
....+++|.+||-+|+|. |..+..+++ .|...|+++|.++... .++ ..+ ..+ + -.....
T Consensus 173 ~~~~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~l~~~~~~~~~~~~~~~~~~~~v~~~t~g~g 252 (363)
T 3m6i_A 173 QRAGVRLGDPVLICGAGPIGLITMLCAKAAGACPLVITDIDEGRLKFAKEICPEVVTHKVERLSAEESAKKIVESFGGIE 252 (363)
T ss_dssp HHHTCCTTCCEEEECCSHHHHHHHHHHHHTTCCSEEEEESCHHHHHHHHHHCTTCEEEECCSCCHHHHHHHHHHHTSSCC
T ss_pred HHcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhchhcccccccccchHHHHHHHHHHhCCCC
Confidence 445578999999999976 676655554 6755699999764210 000 000 000 0 012346
Q ss_pred eeEEEEcCceeeccCChHHHHHHHHhcccCCcEEEEE
Q 010086 169 FDFVFVGGARLEKASKPLDFASEIVRTLKPEGFAVVH 205 (518)
Q Consensus 169 FD~V~s~~~~l~~~~dp~~~l~Ei~RVLKPGG~lvi~ 205 (518)
+|+|+.... -...+++..+.|+|||.+++.
T Consensus 253 ~Dvvid~~g-------~~~~~~~~~~~l~~~G~iv~~ 282 (363)
T 3m6i_A 253 PAVALECTG-------VESSIAAAIWAVKFGGKVFVI 282 (363)
T ss_dssp CSEEEECSC-------CHHHHHHHHHHSCTTCEEEEC
T ss_pred CCEEEECCC-------ChHHHHHHHHHhcCCCEEEEE
Confidence 899987653 124678899999999998875
No 316
>3vyw_A MNMC2; tRNA wobble uridine, modification enzyme, genetic CODE, 5- methylaminomethyl-2-thiouridine, methyltransferase; HET: SAM; 2.49A {Aquifex aeolicus} PDB: 2e58_A*
Probab=88.79 E-value=0.81 Score=46.29 Aligned_cols=86 Identities=24% Similarity=0.287 Sum_probs=55.8
Q ss_pred CCeEEEEcCCCCHhHH-HH---HhcC-C--CcEEEEecCCC------CC-----------------------cEEeccCC
Q 010086 117 SAKSLCVETQYGQDVF-AL---KEIG-V--EDSIGIFKKSS------KP-----------------------LVISGEGH 160 (518)
Q Consensus 117 ~~rvLDVGcGtG~~~~-~L---~~~g-~--~~v~gID~s~~------~~-----------------------l~~~~da~ 160 (518)
.-+|||+|-|||..+. .+ .+.+ . -+.+.++..+- +. .+..||+.
T Consensus 97 ~~~IlE~GFGTGLNfl~t~~~~~~~~~~~~L~~iS~Ek~pl~~~~~~~~~~~~l~~~l~~~~p~~~~~~v~L~l~~GDa~ 176 (308)
T 3vyw_A 97 VIRILDVGFGLGYNLAVALKHLWEVNPKLRVEIISFEKELLKEFPILPEPYREIHEFLLERVPEYEGERLSLKVLLGDAR 176 (308)
T ss_dssp EEEEEEECCTTSHHHHHHHHHHHHHCTTCEEEEEEEESSCCSCCCCCCTTSHHHHHHHHHHCSEEECSSEEEEEEESCHH
T ss_pred CcEEEEeCCCccHHHHHHHHHHHHhCCCcceEEEeecHHHHHhhHhchHhHHHHHHHHHHhCccccCCcEEEEEEechHH
Confidence 3479999999998652 22 2222 1 24567775320 00 01246664
Q ss_pred C-CC-CCCCceeEEEEcCceeeccCChH----HHHHHHHhcccCCcEEEE
Q 010086 161 R-IP-FDGNTFDFVFVGGARLEKASKPL----DFASEIVRTLKPEGFAVV 204 (518)
Q Consensus 161 ~-LP-f~D~SFD~V~s~~~~l~~~~dp~----~~l~Ei~RVLKPGG~lvi 204 (518)
+ +| +++..||+|+--. |.=-.+|+ .+++.|+|.++|||+++-
T Consensus 177 ~~l~~l~~~~~Da~flDg--FsP~kNPeLWs~e~f~~l~~~~~pgg~laT 224 (308)
T 3vyw_A 177 KRIKEVENFKADAVFHDA--FSPYKNPELWTLDFLSLIKERIDEKGYWVS 224 (308)
T ss_dssp HHGGGCCSCCEEEEEECC--SCTTTSGGGGSHHHHHHHHTTEEEEEEEEE
T ss_pred HHHhhhcccceeEEEeCC--CCcccCcccCCHHHHHHHHHHhCCCcEEEE
Confidence 3 33 4566899999854 65555774 789999999999998874
No 317
>4dvj_A Putative zinc-dependent alcohol dehydrogenase Pro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.99A {Rhizobium etli}
Probab=88.68 E-value=0.81 Score=46.49 Aligned_cols=89 Identities=17% Similarity=0.113 Sum_probs=58.0
Q ss_pred HHHcCCCC-----CCCeEEEEc-CCC-CHhHHHHHhc-CCCcEEEEecCCCC---------CcEEec------cCCCCCC
Q 010086 108 LISEGYLS-----QSAKSLCVE-TQY-GQDVFALKEI-GVEDSIGIFKKSSK---------PLVISG------EGHRIPF 164 (518)
Q Consensus 108 L~~~gll~-----~~~rvLDVG-cGt-G~~~~~L~~~-g~~~v~gID~s~~~---------~l~~~~------da~~LPf 164 (518)
|.+..-++ +|.+||-+| +|. |..+..+++. +..+|++++.++.. ..++.. ...+ .
T Consensus 158 l~~~~~~~~~~~~~g~~VlV~Ga~G~vG~~a~qlak~~~g~~Vi~~~~~~~~~~~~~~lGad~vi~~~~~~~~~v~~--~ 235 (363)
T 4dvj_A 158 FFDRLDVNKPVPGAAPAILIVGGAGGVGSIAVQIARQRTDLTVIATASRPETQEWVKSLGAHHVIDHSKPLAAEVAA--L 235 (363)
T ss_dssp HHTTSCTTSCCTTSEEEEEEESTTSHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHHHTTCSEEECTTSCHHHHHHT--T
T ss_pred HHHhhCcCcCcCCCCCEEEEECCCCHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHHHHcCCCEEEeCCCCHHHHHHH--h
Confidence 44445566 788999999 665 7777777664 44799999976310 111110 1111 1
Q ss_pred CCCceeEEEEcCceeeccCChHHHHHHHHhcccCCcEEEEE
Q 010086 165 DGNTFDFVFVGGARLEKASKPLDFASEIVRTLKPEGFAVVH 205 (518)
Q Consensus 165 ~D~SFD~V~s~~~~l~~~~dp~~~l~Ei~RVLKPGG~lvi~ 205 (518)
..+.+|+|+.... -...++++.+.|+|||.+++.
T Consensus 236 ~~~g~Dvvid~~g-------~~~~~~~~~~~l~~~G~iv~~ 269 (363)
T 4dvj_A 236 GLGAPAFVFSTTH-------TDKHAAEIADLIAPQGRFCLI 269 (363)
T ss_dssp CSCCEEEEEECSC-------HHHHHHHHHHHSCTTCEEEEC
T ss_pred cCCCceEEEECCC-------chhhHHHHHHHhcCCCEEEEE
Confidence 3457999997653 234678999999999998875
No 318
>3goh_A Alcohol dehydrogenase, zinc-containing; NP_718042.1, alcohol dehydrogenase superfamily protein, ALCO dehydrogenase groes-like domain; 1.55A {Shewanella oneidensis}
Probab=88.46 E-value=0.62 Score=46.10 Aligned_cols=88 Identities=15% Similarity=0.116 Sum_probs=56.8
Q ss_pred HHHHHHHHcCCCCCCCeEEEEcCCC-CHhHHHHHh-cCCCcEEEEecCCCCCc---------EEeccCCCCCCCCCceeE
Q 010086 103 SVFQDLISEGYLSQSAKSLCVETQY-GQDVFALKE-IGVEDSIGIFKKSSKPL---------VISGEGHRIPFDGNTFDF 171 (518)
Q Consensus 103 ~l~~~L~~~gll~~~~rvLDVGcGt-G~~~~~L~~-~g~~~v~gID~s~~~~l---------~~~~da~~LPf~D~SFD~ 171 (518)
..++-| ...-+++|.+||-.|+|. |..+..+++ .|. +|++++ ++.... ++. |.+++ ...+|+
T Consensus 130 ta~~al-~~~~~~~g~~VlV~GaG~vG~~a~qlak~~Ga-~Vi~~~-~~~~~~~~~~lGa~~v~~-d~~~v---~~g~Dv 202 (315)
T 3goh_A 130 TAWQAF-EKIPLTKQREVLIVGFGAVNNLLTQMLNNAGY-VVDLVS-ASLSQALAAKRGVRHLYR-EPSQV---TQKYFA 202 (315)
T ss_dssp HHHHHH-TTSCCCSCCEEEEECCSHHHHHHHHHHHHHTC-EEEEEC-SSCCHHHHHHHTEEEEES-SGGGC---CSCEEE
T ss_pred HHHHHH-hhcCCCCCCEEEEECCCHHHHHHHHHHHHcCC-EEEEEE-ChhhHHHHHHcCCCEEEc-CHHHh---CCCccE
Confidence 334445 566788999999999975 776655554 674 999999 653211 121 23344 567999
Q ss_pred EEEcCceeeccCChHHHHHHHHhcccCCcEEEEE
Q 010086 172 VFVGGARLEKASKPLDFASEIVRTLKPEGFAVVH 205 (518)
Q Consensus 172 V~s~~~~l~~~~dp~~~l~Ei~RVLKPGG~lvi~ 205 (518)
|+.... - ..+.+..+.|+|||+++..
T Consensus 203 v~d~~g-~-------~~~~~~~~~l~~~G~~v~~ 228 (315)
T 3goh_A 203 IFDAVN-S-------QNAAALVPSLKANGHIICI 228 (315)
T ss_dssp EECC---------------TTGGGEEEEEEEEEE
T ss_pred EEECCC-c-------hhHHHHHHHhcCCCEEEEE
Confidence 997543 1 1235678999999998876
No 319
>3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A
Probab=88.31 E-value=0.94 Score=45.56 Aligned_cols=89 Identities=15% Similarity=0.107 Sum_probs=57.4
Q ss_pred HcCCCCCCCeEEEEcCCC-CHhHHHHHh-cCCCcEEEEecCCCC---------CcEEeccCCCC-----C-CCCCceeEE
Q 010086 110 SEGYLSQSAKSLCVETQY-GQDVFALKE-IGVEDSIGIFKKSSK---------PLVISGEGHRI-----P-FDGNTFDFV 172 (518)
Q Consensus 110 ~~gll~~~~rvLDVGcGt-G~~~~~L~~-~g~~~v~gID~s~~~---------~l~~~~da~~L-----P-f~D~SFD~V 172 (518)
+..-+++|++||-+|+|. |..+..+++ .|..+|+++|.++.. ..++.....++ . .....||+|
T Consensus 160 ~~~~~~~g~~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~v~~~t~g~g~D~v 239 (352)
T 3fpc_A 160 ELANIKLGDTVCVIGIGPVGLMSVAGANHLGAGRIFAVGSRKHCCDIALEYGATDIINYKNGDIVEQILKATDGKGVDKV 239 (352)
T ss_dssp HHTTCCTTCCEEEECCSHHHHHHHHHHHTTTCSSEEEECCCHHHHHHHHHHTCCEEECGGGSCHHHHHHHHTTTCCEEEE
T ss_pred HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHhCCceEEcCCCcCHHHHHHHHcCCCCCCEE
Confidence 455678999999999987 776655555 575589999976421 11111111100 0 122369999
Q ss_pred EEcCceeeccCChHHHHHHHHhcccCCcEEEEE
Q 010086 173 FVGGARLEKASKPLDFASEIVRTLKPEGFAVVH 205 (518)
Q Consensus 173 ~s~~~~l~~~~dp~~~l~Ei~RVLKPGG~lvi~ 205 (518)
+.... - ...+++..+.|+|||.++..
T Consensus 240 ~d~~g-~------~~~~~~~~~~l~~~G~~v~~ 265 (352)
T 3fpc_A 240 VIAGG-D------VHTFAQAVKMIKPGSDIGNV 265 (352)
T ss_dssp EECSS-C------TTHHHHHHHHEEEEEEEEEC
T ss_pred EECCC-C------hHHHHHHHHHHhcCCEEEEe
Confidence 97653 1 14588899999999998775
No 320
>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A*
Probab=88.30 E-value=0.45 Score=47.63 Aligned_cols=88 Identities=8% Similarity=0.023 Sum_probs=56.0
Q ss_pred HcCCCCCCCeEEEEcCCC-CHhHHHHHh-cCCCcEEEEecCCCC---------CcEEeccCCCCC--C--CCCceeEEEE
Q 010086 110 SEGYLSQSAKSLCVETQY-GQDVFALKE-IGVEDSIGIFKKSSK---------PLVISGEGHRIP--F--DGNTFDFVFV 174 (518)
Q Consensus 110 ~~gll~~~~rvLDVGcGt-G~~~~~L~~-~g~~~v~gID~s~~~---------~l~~~~da~~LP--f--~D~SFD~V~s 174 (518)
....+++|++||-.|+|. |..+..+++ .| .+|+++|.++.. ..++.....++. . ..+.+|.|+.
T Consensus 160 ~~~~~~~g~~VlV~GaG~vG~~a~qla~~~G-a~Vi~~~~~~~~~~~~~~lGa~~~i~~~~~~~~~~~~~~~g~~d~vid 238 (340)
T 3s2e_A 160 KVTDTRPGQWVVISGIGGLGHVAVQYARAMG-LRVAAVDIDDAKLNLARRLGAEVAVNARDTDPAAWLQKEIGGAHGVLV 238 (340)
T ss_dssp HTTTCCTTSEEEEECCSTTHHHHHHHHHHTT-CEEEEEESCHHHHHHHHHTTCSEEEETTTSCHHHHHHHHHSSEEEEEE
T ss_pred HHcCCCCCCEEEEECCCHHHHHHHHHHHHCC-CeEEEEeCCHHHHHHHHHcCCCEEEeCCCcCHHHHHHHhCCCCCEEEE
Confidence 445678999999999986 777755554 67 499999976421 111111110000 0 0125898887
Q ss_pred cCceeeccCChHHHHHHHHhcccCCcEEEEE
Q 010086 175 GGARLEKASKPLDFASEIVRTLKPEGFAVVH 205 (518)
Q Consensus 175 ~~~~l~~~~dp~~~l~Ei~RVLKPGG~lvi~ 205 (518)
... -...+++..+.|+|||.+++.
T Consensus 239 ~~g-------~~~~~~~~~~~l~~~G~iv~~ 262 (340)
T 3s2e_A 239 TAV-------SPKAFSQAIGMVRRGGTIALN 262 (340)
T ss_dssp SSC-------CHHHHHHHHHHEEEEEEEEEC
T ss_pred eCC-------CHHHHHHHHHHhccCCEEEEe
Confidence 542 135688899999999998775
No 321
>1boo_A Protein (N-4 cytosine-specific methyltransferase PVU II); type II DNA-(cytosine N4) methyltransferase, amino methylation, selenomethionine; HET: SAH; 2.80A {Proteus vulgaris} SCOP: c.66.1.11
Probab=87.77 E-value=0.26 Score=49.68 Aligned_cols=54 Identities=22% Similarity=0.334 Sum_probs=37.5
Q ss_pred EEeccCCC-CC-CCCCceeEEEEcCceeec-------------cCChHHHHHHHHhcccCCcEEEEEec
Q 010086 154 VISGEGHR-IP-FDGNTFDFVFVGGARLEK-------------ASKPLDFASEIVRTLKPEGFAVVHVR 207 (518)
Q Consensus 154 ~~~~da~~-LP-f~D~SFD~V~s~~~~l~~-------------~~dp~~~l~Ei~RVLKPGG~lvi~~~ 207 (518)
++.+|+.+ |+ +++++||+|++.-=+... .......+.|+.|+|||||.+++...
T Consensus 17 ii~gD~~~~l~~l~~~svDlI~tDPPY~~~~~~~y~~~~~~~~~~~l~~~l~~~~rvLk~~G~i~i~~~ 85 (323)
T 1boo_A 17 MYIGDSLELLESFPEESISLVMTSPPFALQRKKEYGNLEQHEYVDWFLSFAKVVNKKLKPDGSFVVDFG 85 (323)
T ss_dssp EEESCHHHHGGGSCSSCEEEEEECCCCSSSCSCSSCSCHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred EEeCcHHHHHhhCCCCCeeEEEECCCCCCCcccccCCcCHHHHHHHHHHHHHHHHHHCcCCcEEEEEEC
Confidence 45677653 43 678999999987420110 11245788999999999999999865
No 322
>2b5w_A Glucose dehydrogenase; nucleotide binding motif, oxidoreductase; HET: FLC NAP; 1.60A {Haloferax mediterranei} PDB: 2b5v_A* 2vwg_A* 2vwh_A* 2vwp_A* 2vwq_A*
Probab=87.35 E-value=2 Score=43.22 Aligned_cols=85 Identities=19% Similarity=0.303 Sum_probs=55.1
Q ss_pred CCCCC------CeEEEEcCCC-CHhH-HHHH-h-cCCCcEEEEecCCC---CCc-E------EeccCCCCCCC-----CC
Q 010086 113 YLSQS------AKSLCVETQY-GQDV-FALK-E-IGVEDSIGIFKKSS---KPL-V------ISGEGHRIPFD-----GN 167 (518)
Q Consensus 113 ll~~~------~rvLDVGcGt-G~~~-~~L~-~-~g~~~v~gID~s~~---~~l-~------~~~da~~LPf~-----D~ 167 (518)
-+++| .+||-+|+|. |..+ ..++ + .|..+|+++|.++. ... . .. +..+-.+. ++
T Consensus 163 ~~~~g~~~~~~~~VlV~GaG~vG~~a~iqla~k~~Ga~~Vi~~~~~~~~~~~~~~~~~lGa~~v-~~~~~~~~~i~~~~g 241 (357)
T 2b5w_A 163 YASRSAFDWDPSSAFVLGNGSLGLLTLAMLKVDDKGYENLYCLGRRDRPDPTIDIIEELDATYV-DSRQTPVEDVPDVYE 241 (357)
T ss_dssp HHTTTTSCCCCCEEEEECCSHHHHHHHHHHHHCTTCCCEEEEEECCCSSCHHHHHHHHTTCEEE-ETTTSCGGGHHHHSC
T ss_pred CCCCCcccCCCCEEEEECCCHHHHHHHHHHHHHHcCCcEEEEEeCCcccHHHHHHHHHcCCccc-CCCccCHHHHHHhCC
Confidence 35678 9999999976 7766 6666 5 56444999998754 111 0 11 22211111 13
Q ss_pred ceeEEEEcCceeeccCChHHHHHHHHhcccCCcEEEEE
Q 010086 168 TFDFVFVGGARLEKASKPLDFASEIVRTLKPEGFAVVH 205 (518)
Q Consensus 168 SFD~V~s~~~~l~~~~dp~~~l~Ei~RVLKPGG~lvi~ 205 (518)
.||+|+.... -...++++.+.|+|||+++..
T Consensus 242 g~Dvvid~~g-------~~~~~~~~~~~l~~~G~iv~~ 272 (357)
T 2b5w_A 242 QMDFIYEATG-------FPKHAIQSVQALAPNGVGALL 272 (357)
T ss_dssp CEEEEEECSC-------CHHHHHHHHHHEEEEEEEEEC
T ss_pred CCCEEEECCC-------ChHHHHHHHHHHhcCCEEEEE
Confidence 6999997653 124578999999999998775
No 323
>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1
Probab=86.76 E-value=1.6 Score=39.77 Aligned_cols=88 Identities=23% Similarity=0.194 Sum_probs=54.0
Q ss_pred HHHcCCCCCCCeEEEEcCCC--CHhH-HHHHhcCCCcEEEEecCCCC--------CcEEeccCCCCC--------CCCCc
Q 010086 108 LISEGYLSQSAKSLCVETQY--GQDV-FALKEIGVEDSIGIFKKSSK--------PLVISGEGHRIP--------FDGNT 168 (518)
Q Consensus 108 L~~~gll~~~~rvLDVGcGt--G~~~-~~L~~~g~~~v~gID~s~~~--------~l~~~~da~~LP--------f~D~S 168 (518)
+.+.+-++++.+||..|++. |..+ ..++..| .+|+++|.++.. ...+ .|..+-. .....
T Consensus 30 l~~~~~~~~g~~vlV~Ga~ggiG~~~~~~~~~~G-~~V~~~~~~~~~~~~~~~~g~~~~-~d~~~~~~~~~~~~~~~~~~ 107 (198)
T 1pqw_A 30 LCEVGRLSPGERVLIHSATGGVGMAAVSIAKMIG-ARIYTTAGSDAKREMLSRLGVEYV-GDSRSVDFADEILELTDGYG 107 (198)
T ss_dssp HHTTSCCCTTCEEEETTTTSHHHHHHHHHHHHHT-CEEEEEESSHHHHHHHHTTCCSEE-EETTCSTHHHHHHHHTTTCC
T ss_pred HHHHhCCCCCCEEEEeeCCChHHHHHHHHHHHcC-CEEEEEeCCHHHHHHHHHcCCCEE-eeCCcHHHHHHHHHHhCCCC
Confidence 43445678999999999533 5544 4444567 589999976310 0011 1111100 11236
Q ss_pred eeEEEEcCceeeccCChHHHHHHHHhcccCCcEEEEE
Q 010086 169 FDFVFVGGARLEKASKPLDFASEIVRTLKPEGFAVVH 205 (518)
Q Consensus 169 FD~V~s~~~~l~~~~dp~~~l~Ei~RVLKPGG~lvi~ 205 (518)
+|+|+.... ...+++..+.|||||++++.
T Consensus 108 ~D~vi~~~g--------~~~~~~~~~~l~~~G~~v~~ 136 (198)
T 1pqw_A 108 VDVVLNSLA--------GEAIQRGVQILAPGGRFIEL 136 (198)
T ss_dssp EEEEEECCC--------THHHHHHHHTEEEEEEEEEC
T ss_pred CeEEEECCc--------hHHHHHHHHHhccCCEEEEE
Confidence 999997542 14578899999999988774
No 324
>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1
Probab=86.16 E-value=0.96 Score=45.49 Aligned_cols=88 Identities=6% Similarity=0.017 Sum_probs=55.1
Q ss_pred HcCCCCCCCeEEEEcCCC-CHhHHHHHh-cCCCcEEEEecCCCC---------CcEEeccC-CCCC------CC---CCc
Q 010086 110 SEGYLSQSAKSLCVETQY-GQDVFALKE-IGVEDSIGIFKKSSK---------PLVISGEG-HRIP------FD---GNT 168 (518)
Q Consensus 110 ~~gll~~~~rvLDVGcGt-G~~~~~L~~-~g~~~v~gID~s~~~---------~l~~~~da-~~LP------f~---D~S 168 (518)
...-+++|.+||-+|+|. |..+..+++ .| .+|+++|.++.. ..++..+. .+.. .+ ...
T Consensus 162 ~~~~~~~g~~VlV~GaG~vG~~a~qla~~~G-a~Vi~~~~~~~~~~~~~~lGa~~~~~~~~~~~~~~~i~~~~~~~~g~g 240 (352)
T 1e3j_A 162 RRAGVQLGTTVLVIGAGPIGLVSVLAAKAYG-AFVVCTARSPRRLEVAKNCGADVTLVVDPAKEEESSIIERIRSAIGDL 240 (352)
T ss_dssp HHHTCCTTCEEEEECCSHHHHHHHHHHHHTT-CEEEEEESCHHHHHHHHHTTCSEEEECCTTTSCHHHHHHHHHHHSSSC
T ss_pred HhcCCCCCCEEEEECCCHHHHHHHHHHHHcC-CEEEEEcCCHHHHHHHHHhCCCEEEcCcccccHHHHHHHHhccccCCC
Confidence 344578999999999876 666655544 67 459999976321 11111110 1110 01 246
Q ss_pred eeEEEEcCceeeccCChHHHHHHHHhcccCCcEEEEE
Q 010086 169 FDFVFVGGARLEKASKPLDFASEIVRTLKPEGFAVVH 205 (518)
Q Consensus 169 FD~V~s~~~~l~~~~dp~~~l~Ei~RVLKPGG~lvi~ 205 (518)
||+|+.... ....+++..+.|+|||.++..
T Consensus 241 ~D~vid~~g-------~~~~~~~~~~~l~~~G~iv~~ 270 (352)
T 1e3j_A 241 PNVTIDCSG-------NEKCITIGINITRTGGTLMLV 270 (352)
T ss_dssp CSEEEECSC-------CHHHHHHHHHHSCTTCEEEEC
T ss_pred CCEEEECCC-------CHHHHHHHHHHHhcCCEEEEE
Confidence 999997653 124578899999999998774
No 325
>3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A*
Probab=85.05 E-value=0.44 Score=47.78 Aligned_cols=93 Identities=9% Similarity=0.095 Sum_probs=58.8
Q ss_pred HHHHHH-cCCCCCCCeEEEEcCCC-CHhHHHHHh-cCCCcEEEEecCCCC---------CcEEeccCCCC-----CC-CC
Q 010086 105 FQDLIS-EGYLSQSAKSLCVETQY-GQDVFALKE-IGVEDSIGIFKKSSK---------PLVISGEGHRI-----PF-DG 166 (518)
Q Consensus 105 ~~~L~~-~gll~~~~rvLDVGcGt-G~~~~~L~~-~g~~~v~gID~s~~~---------~l~~~~da~~L-----Pf-~D 166 (518)
++-+.. .+.++++++||-+|+|. |..+..+++ .|..+|+++|.++.. ..++..+. ++ .. ..
T Consensus 159 ~~~l~~~~~~~~~g~~vlv~GaG~vG~~a~qla~~~g~~~Vi~~~~~~~~~~~~~~lGa~~~i~~~~-~~~~~v~~~t~g 237 (345)
T 3jv7_A 159 YHAISRVLPLLGPGSTAVVIGVGGLGHVGIQILRAVSAARVIAVDLDDDRLALAREVGADAAVKSGA-GAADAIRELTGG 237 (345)
T ss_dssp HHHHHTTGGGCCTTCEEEEECCSHHHHHHHHHHHHHCCCEEEEEESCHHHHHHHHHTTCSEEEECST-THHHHHHHHHGG
T ss_pred HHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHcCCCEEEcCCC-cHHHHHHHHhCC
Confidence 334444 33578999999999976 776666654 555799999976421 11111110 00 00 11
Q ss_pred CceeEEEEcCceeeccCChHHHHHHHHhcccCCcEEEEE
Q 010086 167 NTFDFVFVGGARLEKASKPLDFASEIVRTLKPEGFAVVH 205 (518)
Q Consensus 167 ~SFD~V~s~~~~l~~~~dp~~~l~Ei~RVLKPGG~lvi~ 205 (518)
..+|+|+.... -...+++..+.|+|||.+++.
T Consensus 238 ~g~d~v~d~~G-------~~~~~~~~~~~l~~~G~iv~~ 269 (345)
T 3jv7_A 238 QGATAVFDFVG-------AQSTIDTAQQVVAVDGHISVV 269 (345)
T ss_dssp GCEEEEEESSC-------CHHHHHHHHHHEEEEEEEEEC
T ss_pred CCCeEEEECCC-------CHHHHHHHHHHHhcCCEEEEE
Confidence 26999987653 124688999999999998775
No 326
>2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A*
Probab=84.52 E-value=1.1 Score=44.96 Aligned_cols=92 Identities=10% Similarity=-0.007 Sum_probs=55.0
Q ss_pred HHHHHcCCCCCCCeEEEEcCCC-CHhHHHHHh-cCCCcEEEEecCCCC-----CcE-EeccCCCCCCC-------CCcee
Q 010086 106 QDLISEGYLSQSAKSLCVETQY-GQDVFALKE-IGVEDSIGIFKKSSK-----PLV-ISGEGHRIPFD-------GNTFD 170 (518)
Q Consensus 106 ~~L~~~gll~~~~rvLDVGcGt-G~~~~~L~~-~g~~~v~gID~s~~~-----~l~-~~~da~~LPf~-------D~SFD 170 (518)
+-+....-+ +|.+||-+|+|. |..+..+++ .|..+|++++.++.. .+. ..-+..+-.+. ...+|
T Consensus 155 ~~l~~~~~~-~g~~VlV~GaG~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~~~~~la~~v~~~~~~~~~~~~~~~~~~g~D 233 (343)
T 2dq4_A 155 HTVYAGSGV-SGKSVLITGAGPIGLMAAMVVRASGAGPILVSDPNPYRLAFARPYADRLVNPLEEDLLEVVRRVTGSGVE 233 (343)
T ss_dssp HHHHSTTCC-TTSCEEEECCSHHHHHHHHHHHHTTCCSEEEECSCHHHHGGGTTTCSEEECTTTSCHHHHHHHHHSSCEE
T ss_pred HHHHHhCCC-CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhHHhccCcCccCHHHHHHHhcCCCCC
Confidence 334324445 899999999965 666655544 674489999976311 010 00011110000 23589
Q ss_pred EEEEcCceeeccCChHHHHHHHHhcccCCcEEEEE
Q 010086 171 FVFVGGARLEKASKPLDFASEIVRTLKPEGFAVVH 205 (518)
Q Consensus 171 ~V~s~~~~l~~~~dp~~~l~Ei~RVLKPGG~lvi~ 205 (518)
+|+.... ....+++..+.|+|||.++..
T Consensus 234 ~vid~~g-------~~~~~~~~~~~l~~~G~iv~~ 261 (343)
T 2dq4_A 234 VLLEFSG-------NEAAIHQGLMALIPGGEARIL 261 (343)
T ss_dssp EEEECSC-------CHHHHHHHHHHEEEEEEEEEC
T ss_pred EEEECCC-------CHHHHHHHHHHHhcCCEEEEE
Confidence 9987653 124578899999999987764
No 327
>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima}
Probab=84.48 E-value=1.2 Score=45.78 Aligned_cols=87 Identities=10% Similarity=0.049 Sum_probs=52.5
Q ss_pred CCCCCCeEEEEcCCC-CHhHHHHHh-cCCCcEEEEecCCCC---------CcEEeccCCCC-----C-CCCCceeEEEEc
Q 010086 113 YLSQSAKSLCVETQY-GQDVFALKE-IGVEDSIGIFKKSSK---------PLVISGEGHRI-----P-FDGNTFDFVFVG 175 (518)
Q Consensus 113 ll~~~~rvLDVGcGt-G~~~~~L~~-~g~~~v~gID~s~~~---------~l~~~~da~~L-----P-f~D~SFD~V~s~ 175 (518)
.+++|++||-+|+|. |..+..+++ .|...|+++|.++.. ..++.....++ . .....+|+|+..
T Consensus 210 ~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~i~~~t~g~g~D~vid~ 289 (404)
T 3ip1_A 210 GIRPGDNVVILGGGPIGLAAVAILKHAGASKVILSEPSEVRRNLAKELGADHVIDPTKENFVEAVLDYTNGLGAKLFLEA 289 (404)
T ss_dssp CCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCHHHHHHHHHHTCSEEECTTTSCHHHHHHHHTTTCCCSEEEEC
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHcCCCEEEcCCCCCHHHHHHHHhCCCCCCEEEEC
Confidence 578999999999976 666655554 675589999976421 11111111100 0 112369999976
Q ss_pred CceeeccCChHHHHHHHHhcc----cCCcEEEEE
Q 010086 176 GARLEKASKPLDFASEIVRTL----KPEGFAVVH 205 (518)
Q Consensus 176 ~~~l~~~~dp~~~l~Ei~RVL----KPGG~lvi~ 205 (518)
.. .+...+..+.+.| +|||.+++.
T Consensus 290 ~g------~~~~~~~~~~~~l~~~~~~~G~iv~~ 317 (404)
T 3ip1_A 290 TG------VPQLVWPQIEEVIWRARGINATVAIV 317 (404)
T ss_dssp SS------CHHHHHHHHHHHHHHCSCCCCEEEEC
T ss_pred CC------CcHHHHHHHHHHHHhccCCCcEEEEe
Confidence 53 2333445555555 999998875
No 328
>1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1
Probab=84.03 E-value=0.52 Score=48.16 Aligned_cols=88 Identities=18% Similarity=0.132 Sum_probs=54.9
Q ss_pred cCC-CCCCCeEEEEcCCC-CHhHHHHHh-cCCCcEEEEecCCCC---------CcEEecc---CC----CC-CC-CCCce
Q 010086 111 EGY-LSQSAKSLCVETQY-GQDVFALKE-IGVEDSIGIFKKSSK---------PLVISGE---GH----RI-PF-DGNTF 169 (518)
Q Consensus 111 ~gl-l~~~~rvLDVGcGt-G~~~~~L~~-~g~~~v~gID~s~~~---------~l~~~~d---a~----~L-Pf-~D~SF 169 (518)
..- +++|.+||-+|+|. |..+..+++ .|..+|++++.++.. ..++... .. .+ .. +...+
T Consensus 189 ~~~~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~~~v~~~~~g~g~ 268 (380)
T 1vj0_A 189 EYPESFAGKTVVIQGAGPLGLFGVVIARSLGAENVIVIAGSPNRLKLAEEIGADLTLNRRETSVEERRKAIMDITHGRGA 268 (380)
T ss_dssp TCSSCCBTCEEEEECCSHHHHHHHHHHHHTTBSEEEEEESCHHHHHHHHHTTCSEEEETTTSCHHHHHHHHHHHTTTSCE
T ss_pred hcCCCCCCCEEEEECcCHHHHHHHHHHHHcCCceEEEEcCCHHHHHHHHHcCCcEEEeccccCcchHHHHHHHHhCCCCC
Confidence 345 78899999999776 666655554 564589999976321 1111111 00 00 01 12369
Q ss_pred eEEEEcCceeeccCChHHHHHHHHhcccCCcEEEEE
Q 010086 170 DFVFVGGARLEKASKPLDFASEIVRTLKPEGFAVVH 205 (518)
Q Consensus 170 D~V~s~~~~l~~~~dp~~~l~Ei~RVLKPGG~lvi~ 205 (518)
|+|+.... - ...+++..+.|+|||.++..
T Consensus 269 Dvvid~~g-~------~~~~~~~~~~l~~~G~iv~~ 297 (380)
T 1vj0_A 269 DFILEATG-D------SRALLEGSELLRRGGFYSVA 297 (380)
T ss_dssp EEEEECSS-C------TTHHHHHHHHEEEEEEEEEC
T ss_pred cEEEECCC-C------HHHHHHHHHHHhcCCEEEEE
Confidence 99997653 1 13578899999999998764
No 329
>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*
Probab=83.30 E-value=1.1 Score=44.95 Aligned_cols=88 Identities=16% Similarity=0.095 Sum_probs=54.4
Q ss_pred HcCCCCCCCeEEEEcCCC-CHhHHHHH-hcCCCcEEEEecCCCC---------CcEEeccCCCC-----C-CCCCceeEE
Q 010086 110 SEGYLSQSAKSLCVETQY-GQDVFALK-EIGVEDSIGIFKKSSK---------PLVISGEGHRI-----P-FDGNTFDFV 172 (518)
Q Consensus 110 ~~gll~~~~rvLDVGcGt-G~~~~~L~-~~g~~~v~gID~s~~~---------~l~~~~da~~L-----P-f~D~SFD~V 172 (518)
...-+ +|.+||-+|+|. |..+..++ ..|..+|+++|.++.. ..++..+..++ . .....+|+|
T Consensus 162 ~~~~~-~g~~VlV~GaG~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~~~~~~Ga~~~~~~~~~~~~~~v~~~~~g~g~D~v 240 (348)
T 2d8a_A 162 LAGPI-SGKSVLITGAGPLGLLGIAVAKASGAYPVIVSEPSDFRRELAKKVGADYVINPFEEDVVKEVMDITDGNGVDVF 240 (348)
T ss_dssp TTSCC-TTCCEEEECCSHHHHHHHHHHHHTTCCSEEEECSCHHHHHHHHHHTCSEEECTTTSCHHHHHHHHTTTSCEEEE
T ss_pred HhcCC-CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhCCCEEECCCCcCHHHHHHHHcCCCCCCEE
Confidence 34446 899999999965 66654444 4674489999976321 01111110100 0 012369999
Q ss_pred EEcCceeeccCChHHHHHHHHhcccCCcEEEEE
Q 010086 173 FVGGARLEKASKPLDFASEIVRTLKPEGFAVVH 205 (518)
Q Consensus 173 ~s~~~~l~~~~dp~~~l~Ei~RVLKPGG~lvi~ 205 (518)
+.... ....++++.+.|+|||.++..
T Consensus 241 id~~g-------~~~~~~~~~~~l~~~G~iv~~ 266 (348)
T 2d8a_A 241 LEFSG-------APKALEQGLQAVTPAGRVSLL 266 (348)
T ss_dssp EECSC-------CHHHHHHHHHHEEEEEEEEEC
T ss_pred EECCC-------CHHHHHHHHHHHhcCCEEEEE
Confidence 98653 124678899999999998775
No 330
>1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A*
Probab=83.13 E-value=0.7 Score=45.99 Aligned_cols=92 Identities=14% Similarity=0.094 Sum_probs=56.1
Q ss_pred HHHHHHcCCCCCCCeEEEEcCCC--CHhH-HHHHhcCCCcEEEEecCCCC-------CcEEeccCCC-CC-------CCC
Q 010086 105 FQDLISEGYLSQSAKSLCVETQY--GQDV-FALKEIGVEDSIGIFKKSSK-------PLVISGEGHR-IP-------FDG 166 (518)
Q Consensus 105 ~~~L~~~gll~~~~rvLDVGcGt--G~~~-~~L~~~g~~~v~gID~s~~~-------~l~~~~da~~-LP-------f~D 166 (518)
++-+.+.+.++++.+||..|++. |..+ ..++..| .+|+++|.++.. ......|..+ -. ...
T Consensus 134 ~~al~~~~~~~~g~~vlV~Ga~ggiG~~~~~~~~~~G-~~V~~~~~~~~~~~~~~~~g~~~~~d~~~~~~~~~~~~~~~~ 212 (333)
T 1v3u_A 134 YFGLLEVCGVKGGETVLVSAAAGAVGSVVGQIAKLKG-CKVVGAAGSDEKIAYLKQIGFDAAFNYKTVNSLEEALKKASP 212 (333)
T ss_dssp HHHHHTTSCCCSSCEEEEESTTBHHHHHHHHHHHHTT-CEEEEEESSHHHHHHHHHTTCSEEEETTSCSCHHHHHHHHCT
T ss_pred HHHHHHhhCCCCCCEEEEecCCCcHHHHHHHHHHHCC-CEEEEEeCCHHHHHHHHhcCCcEEEecCCHHHHHHHHHHHhC
Confidence 33444555678999999999843 5544 3444567 489999975310 0000111111 00 011
Q ss_pred CceeEEEEcCceeeccCChHHHHHHHHhcccCCcEEEEE
Q 010086 167 NTFDFVFVGGARLEKASKPLDFASEIVRTLKPEGFAVVH 205 (518)
Q Consensus 167 ~SFD~V~s~~~~l~~~~dp~~~l~Ei~RVLKPGG~lvi~ 205 (518)
+.+|+|+.+.. ...+.+..+.|||||.+++.
T Consensus 213 ~~~d~vi~~~g--------~~~~~~~~~~l~~~G~~v~~ 243 (333)
T 1v3u_A 213 DGYDCYFDNVG--------GEFLNTVLSQMKDFGKIAIC 243 (333)
T ss_dssp TCEEEEEESSC--------HHHHHHHHTTEEEEEEEEEC
T ss_pred CCCeEEEECCC--------hHHHHHHHHHHhcCCEEEEE
Confidence 46999998764 13478889999999998764
No 331
>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021}
Probab=82.30 E-value=0.6 Score=47.37 Aligned_cols=92 Identities=13% Similarity=0.082 Sum_probs=57.9
Q ss_pred HHHHHHcCCCCCCCeEEEEcCCC-CHhHHHHHh-cCCCcEEEEecCCCC---------CcEEeccCCCC-----C-CCCC
Q 010086 105 FQDLISEGYLSQSAKSLCVETQY-GQDVFALKE-IGVEDSIGIFKKSSK---------PLVISGEGHRI-----P-FDGN 167 (518)
Q Consensus 105 ~~~L~~~gll~~~~rvLDVGcGt-G~~~~~L~~-~g~~~v~gID~s~~~---------~l~~~~da~~L-----P-f~D~ 167 (518)
++-+.+.+-+++|.+||-+|+|. |..+..+++ .| .+|+++|.++.. ..++..+..++ . ..+.
T Consensus 178 ~~al~~~~~~~~g~~VlV~G~G~vG~~a~qla~~~G-a~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~v~~~~~g~ 256 (363)
T 3uog_A 178 WFALVEKGHLRAGDRVVVQGTGGVALFGLQIAKATG-AEVIVTSSSREKLDRAFALGADHGINRLEEDWVERVYALTGDR 256 (363)
T ss_dssp HHHHTTTTCCCTTCEEEEESSBHHHHHHHHHHHHTT-CEEEEEESCHHHHHHHHHHTCSEEEETTTSCHHHHHHHHHTTC
T ss_pred HHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcC-CEEEEEecCchhHHHHHHcCCCEEEcCCcccHHHHHHHHhCCC
Confidence 34444556688999999999886 666655544 67 589999976311 11111110110 0 1233
Q ss_pred ceeEEEEcCceeeccCChHHHHHHHHhcccCCcEEEEE
Q 010086 168 TFDFVFVGGARLEKASKPLDFASEIVRTLKPEGFAVVH 205 (518)
Q Consensus 168 SFD~V~s~~~~l~~~~dp~~~l~Ei~RVLKPGG~lvi~ 205 (518)
.+|+|+.... ...+.+..+.|+|||.+++.
T Consensus 257 g~D~vid~~g--------~~~~~~~~~~l~~~G~iv~~ 286 (363)
T 3uog_A 257 GADHILEIAG--------GAGLGQSLKAVAPDGRISVI 286 (363)
T ss_dssp CEEEEEEETT--------SSCHHHHHHHEEEEEEEEEE
T ss_pred CceEEEECCC--------hHHHHHHHHHhhcCCEEEEE
Confidence 6999997643 12477888999999998876
No 332
>4eez_A Alcohol dehydrogenase 1; site-saturation mutagenesis, directed evolution, isobutyraldehyde, biofuel, oxidoreductase; HET: PG4; 1.90A {Lactococcus lactis subsp} PDB: 4eex_A*
Probab=82.10 E-value=3.8 Score=40.75 Aligned_cols=88 Identities=15% Similarity=0.003 Sum_probs=53.0
Q ss_pred cCCCCCCCeEEEEcCCCC-HhH-HHHHhcCCCcEEEEecCCCC---------CcEEeccCCC----C-C-CCCCceeEEE
Q 010086 111 EGYLSQSAKSLCVETQYG-QDV-FALKEIGVEDSIGIFKKSSK---------PLVISGEGHR----I-P-FDGNTFDFVF 173 (518)
Q Consensus 111 ~gll~~~~rvLDVGcGtG-~~~-~~L~~~g~~~v~gID~s~~~---------~l~~~~da~~----L-P-f~D~SFD~V~ 173 (518)
...+++|++||-+|+|++ ..+ ..++..+..+|+++|.++.. ..++.....+ + . ....-+|.++
T Consensus 158 ~~~~~~g~~VlV~GaG~~g~~a~~~a~~~~g~~Vi~~~~~~~r~~~~~~~Ga~~~i~~~~~~~~~~v~~~t~g~g~d~~~ 237 (348)
T 4eez_A 158 VSGVKPGDWQVIFGAGGLGNLAIQYAKNVFGAKVIAVDINQDKLNLAKKIGADVTINSGDVNPVDEIKKITGGLGVQSAI 237 (348)
T ss_dssp HHTCCTTCEEEEECCSHHHHHHHHHHHHTSCCEEEEEESCHHHHHHHHHTTCSEEEEC-CCCHHHHHHHHTTSSCEEEEE
T ss_pred ccCCCCCCEEEEEcCCCccHHHHHHHHHhCCCEEEEEECcHHHhhhhhhcCCeEEEeCCCCCHHHHhhhhcCCCCceEEE
Confidence 334689999999999873 333 44445555799999976421 1111110000 0 0 1223467776
Q ss_pred EcCceeeccCChHHHHHHHHhcccCCcEEEEE
Q 010086 174 VGGARLEKASKPLDFASEIVRTLKPEGFAVVH 205 (518)
Q Consensus 174 s~~~~l~~~~dp~~~l~Ei~RVLKPGG~lvi~ 205 (518)
.... -...+....+.|+|||.+++.
T Consensus 238 ~~~~-------~~~~~~~~~~~l~~~G~~v~~ 262 (348)
T 4eez_A 238 VCAV-------ARIAFEQAVASLKPMGKMVAV 262 (348)
T ss_dssp ECCS-------CHHHHHHHHHTEEEEEEEEEC
T ss_pred Eecc-------CcchhheeheeecCCceEEEE
Confidence 5432 235678889999999998775
No 333
>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis}
Probab=81.84 E-value=1.3 Score=44.32 Aligned_cols=91 Identities=14% Similarity=0.064 Sum_probs=56.3
Q ss_pred HHHHHcCCCCCCCeEEEEcCCC--CHhHHHHH-hcCCCcEEEEecCCCCCc---------EEeccCCCC------CCCCC
Q 010086 106 QDLISEGYLSQSAKSLCVETQY--GQDVFALK-EIGVEDSIGIFKKSSKPL---------VISGEGHRI------PFDGN 167 (518)
Q Consensus 106 ~~L~~~gll~~~~rvLDVGcGt--G~~~~~L~-~~g~~~v~gID~s~~~~l---------~~~~da~~L------Pf~D~ 167 (518)
..+.+..-+++|.+||-+|+|+ |..+..++ ..| .+|+++|.++.... ++.....++ -....
T Consensus 134 ~~~~~~~~~~~g~~VlV~Ga~g~iG~~~~~~a~~~G-a~Vi~~~~~~~~~~~~~~lga~~~~~~~~~~~~~~~~~~~~~~ 212 (340)
T 3gms_A 134 VTCTETLNLQRNDVLLVNACGSAIGHLFAQLSQILN-FRLIAVTRNNKHTEELLRLGAAYVIDTSTAPLYETVMELTNGI 212 (340)
T ss_dssp HHHHTTSCCCTTCEEEESSTTSHHHHHHHHHHHHHT-CEEEEEESSSTTHHHHHHHTCSEEEETTTSCHHHHHHHHTTTS
T ss_pred HHHHHhcccCCCCEEEEeCCccHHHHHHHHHHHHcC-CEEEEEeCCHHHHHHHHhCCCcEEEeCCcccHHHHHHHHhCCC
Confidence 3455666789999999999985 55554444 467 58999998753211 111111100 01224
Q ss_pred ceeEEEEcCceeeccCChHHHHHHHHhcccCCcEEEEE
Q 010086 168 TFDFVFVGGARLEKASKPLDFASEIVRTLKPEGFAVVH 205 (518)
Q Consensus 168 SFD~V~s~~~~l~~~~dp~~~l~Ei~RVLKPGG~lvi~ 205 (518)
.+|+|+.... - ....+..+.|||||.++..
T Consensus 213 g~Dvvid~~g-~-------~~~~~~~~~l~~~G~iv~~ 242 (340)
T 3gms_A 213 GADAAIDSIG-G-------PDGNELAFSLRPNGHFLTI 242 (340)
T ss_dssp CEEEEEESSC-H-------HHHHHHHHTEEEEEEEEEC
T ss_pred CCcEEEECCC-C-------hhHHHHHHHhcCCCEEEEE
Confidence 7999998653 1 2244566899999998775
No 334
>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=81.61 E-value=3.8 Score=41.63 Aligned_cols=82 Identities=17% Similarity=0.167 Sum_probs=53.7
Q ss_pred CCCCCCeEEEEcCCC-CHhHHHHHh-cCCCcEEEEecCCCC---------CcEEecc----CCCCCCCCCceeEEEEcCc
Q 010086 113 YLSQSAKSLCVETQY-GQDVFALKE-IGVEDSIGIFKKSSK---------PLVISGE----GHRIPFDGNTFDFVFVGGA 177 (518)
Q Consensus 113 ll~~~~rvLDVGcGt-G~~~~~L~~-~g~~~v~gID~s~~~---------~l~~~~d----a~~LPf~D~SFD~V~s~~~ 177 (518)
.+++|++||-+|+|. |..+..+++ .| .+|++++.++.. ..++... .+++. +.||+|+....
T Consensus 191 ~~~~g~~VlV~GaG~vG~~aiqlak~~G-a~Vi~~~~~~~~~~~a~~lGa~~vi~~~~~~~~~~~~---~g~Dvvid~~g 266 (369)
T 1uuf_A 191 QAGPGKKVGVVGIGGLGHMGIKLAHAMG-AHVVAFTTSEAKREAAKALGADEVVNSRNADEMAAHL---KSFDFILNTVA 266 (369)
T ss_dssp TCCTTCEEEEECCSHHHHHHHHHHHHTT-CEEEEEESSGGGHHHHHHHTCSEEEETTCHHHHHTTT---TCEEEEEECCS
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHCC-CEEEEEeCCHHHHHHHHHcCCcEEeccccHHHHHHhh---cCCCEEEECCC
Confidence 478999999999986 666655554 57 479999976421 1111110 11221 46999997653
Q ss_pred eeeccCChHHHHHHHHhcccCCcEEEEE
Q 010086 178 RLEKASKPLDFASEIVRTLKPEGFAVVH 205 (518)
Q Consensus 178 ~l~~~~dp~~~l~Ei~RVLKPGG~lvi~ 205 (518)
-. ..+++..+.|+|||.++..
T Consensus 267 -~~------~~~~~~~~~l~~~G~iv~~ 287 (369)
T 1uuf_A 267 -AP------HNLDDFTTLLKRDGTMTLV 287 (369)
T ss_dssp -SC------CCHHHHHTTEEEEEEEEEC
T ss_pred -CH------HHHHHHHHHhccCCEEEEe
Confidence 11 2367889999999998764
No 335
>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A
Probab=81.42 E-value=1.6 Score=43.60 Aligned_cols=84 Identities=7% Similarity=-0.028 Sum_probs=52.8
Q ss_pred CCCCCCeEEEEcCCC-CHhHHHHH-hcCCCcEEEEecCCCC--------CcEEeccCCCCCCCC------CceeEEEEcC
Q 010086 113 YLSQSAKSLCVETQY-GQDVFALK-EIGVEDSIGIFKKSSK--------PLVISGEGHRIPFDG------NTFDFVFVGG 176 (518)
Q Consensus 113 ll~~~~rvLDVGcGt-G~~~~~L~-~~g~~~v~gID~s~~~--------~l~~~~da~~LPf~D------~SFD~V~s~~ 176 (518)
-++++.+||-+|+|. |..+..++ ..| .+|++++.++.. ...+ -|..+-.+.+ +.+|+|+...
T Consensus 161 ~~~~g~~VlV~GaG~vG~~~~~~a~~~G-a~Vi~~~~~~~~~~~~~~lGa~~~-~d~~~~~~~~~~~~~~~~~d~vid~~ 238 (339)
T 1rjw_A 161 GAKPGEWVAIYGIGGLGHVAVQYAKAMG-LNVVAVDIGDEKLELAKELGADLV-VNPLKEDAAKFMKEKVGGVHAAVVTA 238 (339)
T ss_dssp TCCTTCEEEEECCSTTHHHHHHHHHHTT-CEEEEECSCHHHHHHHHHTTCSEE-ECTTTSCHHHHHHHHHSSEEEEEESS
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcC-CEEEEEeCCHHHHHHHHHCCCCEE-ecCCCccHHHHHHHHhCCCCEEEECC
Confidence 478899999999975 66554444 467 599999976321 0000 1111101100 3589998765
Q ss_pred ceeeccCChHHHHHHHHhcccCCcEEEEE
Q 010086 177 ARLEKASKPLDFASEIVRTLKPEGFAVVH 205 (518)
Q Consensus 177 ~~l~~~~dp~~~l~Ei~RVLKPGG~lvi~ 205 (518)
. ....+++..+.|+|||.++..
T Consensus 239 g-------~~~~~~~~~~~l~~~G~~v~~ 260 (339)
T 1rjw_A 239 V-------SKPAFQSAYNSIRRGGACVLV 260 (339)
T ss_dssp C-------CHHHHHHHHHHEEEEEEEEEC
T ss_pred C-------CHHHHHHHHHHhhcCCEEEEe
Confidence 3 124678899999999988764
No 336
>2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus}
Probab=81.19 E-value=0.75 Score=46.14 Aligned_cols=83 Identities=10% Similarity=0.065 Sum_probs=52.9
Q ss_pred CCCCCCeEEEEcCCC-CHhHHHHHh-c--CCCcEEEEecCCCC---------CcEEec-c----CCCCCCCCCceeEEEE
Q 010086 113 YLSQSAKSLCVETQY-GQDVFALKE-I--GVEDSIGIFKKSSK---------PLVISG-E----GHRIPFDGNTFDFVFV 174 (518)
Q Consensus 113 ll~~~~rvLDVGcGt-G~~~~~L~~-~--g~~~v~gID~s~~~---------~l~~~~-d----a~~LPf~D~SFD~V~s 174 (518)
-+ +|++||-+|+|. |..+..+++ . | .+|+++|.++.. ..++.. + ..++. ....||+|+.
T Consensus 168 ~~-~g~~VlV~GaG~vG~~aiqlak~~~~G-a~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~~~-~g~g~D~vid 244 (344)
T 2h6e_A 168 KF-AEPVVIVNGIGGLAVYTIQILKALMKN-ITIVGISRSKKHRDFALELGADYVSEMKDAESLINKLT-DGLGASIAID 244 (344)
T ss_dssp TC-SSCEEEEECCSHHHHHHHHHHHHHCTT-CEEEEECSCHHHHHHHHHHTCSEEECHHHHHHHHHHHH-TTCCEEEEEE
T ss_pred CC-CCCEEEEECCCHHHHHHHHHHHHhcCC-CEEEEEeCCHHHHHHHHHhCCCEEeccccchHHHHHhh-cCCCccEEEE
Confidence 35 899999999975 666655544 5 7 579999976321 111110 0 00110 1236999998
Q ss_pred cCceeeccCChHHHHHHHHhcccCCcEEEEE
Q 010086 175 GGARLEKASKPLDFASEIVRTLKPEGFAVVH 205 (518)
Q Consensus 175 ~~~~l~~~~dp~~~l~Ei~RVLKPGG~lvi~ 205 (518)
... -...++++.+.|+|||.++..
T Consensus 245 ~~g-------~~~~~~~~~~~l~~~G~iv~~ 268 (344)
T 2h6e_A 245 LVG-------TEETTYNLGKLLAQEGAIILV 268 (344)
T ss_dssp SSC-------CHHHHHHHHHHEEEEEEEEEC
T ss_pred CCC-------ChHHHHHHHHHhhcCCEEEEe
Confidence 653 124678899999999998764
No 337
>4df3_A Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; NADP rossmann superfamily, S-adenosyl-L-M (SAM) binding, nucleolus; HET: SAM; 1.73A {Aeropyrum pernix}
Probab=81.16 E-value=1.8 Score=41.86 Aligned_cols=57 Identities=14% Similarity=0.296 Sum_probs=41.0
Q ss_pred cccccCCceEEEEeCCCCCCcchhhhhhhhC-CCCCcceEEEEEcCCccchHhh----ccCCceEEEe
Q 010086 312 ADISFKNRYVYVDVGARSYGSSIGSWFKKQY-PKQNKTFDVYAIEADKTFHEEY----KVKKKVKLLP 374 (518)
Q Consensus 312 ~d~s~~~r~V~iD~GAn~~g~sv~~~F~~~Y-P~~~~~f~V~afE~np~~~~~~----~~~~~V~~~~ 374 (518)
-.+.++|+..++|+|++. |... ..+.+.- |.+ .||++|.+|...+.. .+.+||+.+-
T Consensus 71 ~~l~ikpG~~VldlG~G~-G~~~-~~la~~VG~~G----~V~avD~s~~~~~~l~~~a~~~~ni~~V~ 132 (233)
T 4df3_A 71 IELPVKEGDRILYLGIAS-GTTA-SHMSDIIGPRG----RIYGVEFAPRVMRDLLTVVRDRRNIFPIL 132 (233)
T ss_dssp SCCCCCTTCEEEEETCTT-SHHH-HHHHHHHCTTC----EEEEEECCHHHHHHHHHHSTTCTTEEEEE
T ss_pred hhcCCCCCCEEEEecCcC-CHHH-HHHHHHhCCCc----eEEEEeCCHHHHHHHHHhhHhhcCeeEEE
Confidence 356789999999999994 8644 6666654 654 799999999875543 2456776544
No 338
>3dxy_A TRNA (guanine-N(7)-)-methyltransferase; rossmann fold methyltransferase, tRNA modification, S-adenosyl-L-methionine, TR processing; HET: SAM; 1.50A {Escherichia coli} PDB: 3dxx_A* 3dxz_A*
Probab=80.54 E-value=3.3 Score=38.92 Aligned_cols=65 Identities=17% Similarity=0.185 Sum_probs=43.7
Q ss_pred ccCCcccccc---cCCceEEEEeCCCCCCcchhhhhhhhCCCCCcceEEEEEcCCccchHh----h--ccCCceEEEeec
Q 010086 306 KYLPSMADIS---FKNRYVYVDVGARSYGSSIGSWFKKQYPKQNKTFDVYAIEADKTFHEE----Y--KVKKKVKLLPYA 376 (518)
Q Consensus 306 ~ylp~~~d~s---~~~r~V~iD~GAn~~g~sv~~~F~~~YP~~~~~f~V~afE~np~~~~~----~--~~~~~V~~~~~A 376 (518)
.|-+...|.. .+++.+++|+|+| .|. ++..+.+.+|.. .|+++|.++...+. . ...+||+++..-
T Consensus 19 ~~~~~~~d~~~~f~~~~~~vLDiGcG-~G~-~~~~lA~~~p~~----~v~giD~s~~~l~~a~~~~~~~~l~nv~~~~~D 92 (218)
T 3dxy_A 19 EFSEDMLDFPALFGREAPVTLEIGFG-MGA-SLVAMAKDRPEQ----DFLGIEVHSPGVGACLASAHEEGLSNLRVMCHD 92 (218)
T ss_dssp CCCSSCCCHHHHHSSCCCEEEEESCT-TCH-HHHHHHHHCTTS----EEEEECSCHHHHHHHHHHHHHTTCSSEEEECSC
T ss_pred CCCCCCCCHHHHcCCCCCeEEEEeee-ChH-HHHHHHHHCCCC----eEEEEEecHHHHHHHHHHHHHhCCCcEEEEECC
Confidence 3444444443 2368899999999 486 436777788843 89999999985432 2 134688887763
No 339
>1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D
Probab=79.39 E-value=0.97 Score=44.35 Aligned_cols=87 Identities=14% Similarity=0.086 Sum_probs=55.4
Q ss_pred HHHHHHHcCCCCCCCeEEEEcC-CC-CHhHHHHH-hcCCCcEEEEecCCCCCc---------EEecc-----CCCCCCCC
Q 010086 104 VFQDLISEGYLSQSAKSLCVET-QY-GQDVFALK-EIGVEDSIGIFKKSSKPL---------VISGE-----GHRIPFDG 166 (518)
Q Consensus 104 l~~~L~~~gll~~~~rvLDVGc-Gt-G~~~~~L~-~~g~~~v~gID~s~~~~l---------~~~~d-----a~~LPf~D 166 (518)
.++-+...+ +++|.+||-+|+ |. |..+..++ ..| .+|++++.++.... ++... .+.+
T Consensus 114 a~~~l~~~~-~~~g~~vlV~Ga~G~vG~~~~~~a~~~G-a~Vi~~~~~~~~~~~~~~~ga~~~~~~~~~~~~~~~~---- 187 (302)
T 1iz0_A 114 AYLALKRAQ-ARPGEKVLVQAAAGALGTAAVQVARAMG-LRVLAAASRPEKLALPLALGAEEAATYAEVPERAKAW---- 187 (302)
T ss_dssp HHHHHHHTT-CCTTCEEEESSTTBHHHHHHHHHHHHTT-CEEEEEESSGGGSHHHHHTTCSEEEEGGGHHHHHHHT----
T ss_pred HHHHHHHhc-CCCCCEEEEECCCcHHHHHHHHHHHHCC-CEEEEEeCCHHHHHHHHhcCCCEEEECCcchhHHHHh----
Confidence 334454556 899999999998 33 66554444 467 58999997642111 11110 0111
Q ss_pred CceeEEEEcCceeeccCChHHHHHHHHhcccCCcEEEEE
Q 010086 167 NTFDFVFVGGARLEKASKPLDFASEIVRTLKPEGFAVVH 205 (518)
Q Consensus 167 ~SFD~V~s~~~~l~~~~dp~~~l~Ei~RVLKPGG~lvi~ 205 (518)
+.+|+|+. .. - ..+++..+.|+|||.++..
T Consensus 188 ~~~d~vid-~g-~-------~~~~~~~~~l~~~G~~v~~ 217 (302)
T 1iz0_A 188 GGLDLVLE-VR-G-------KEVEESLGLLAHGGRLVYI 217 (302)
T ss_dssp TSEEEEEE-CS-C-------TTHHHHHTTEEEEEEEEEC
T ss_pred cCceEEEE-CC-H-------HHHHHHHHhhccCCEEEEE
Confidence 46999998 54 1 2478889999999988764
No 340
>3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus}
Probab=79.31 E-value=1.7 Score=43.63 Aligned_cols=92 Identities=15% Similarity=0.195 Sum_probs=55.6
Q ss_pred HHHHcCCCC------CCCeEEEE-cCCC-CHhHHHHHh-cCCCcEEEEecCCCC---------CcEEeccC---CCC-CC
Q 010086 107 DLISEGYLS------QSAKSLCV-ETQY-GQDVFALKE-IGVEDSIGIFKKSSK---------PLVISGEG---HRI-PF 164 (518)
Q Consensus 107 ~L~~~gll~------~~~rvLDV-GcGt-G~~~~~L~~-~g~~~v~gID~s~~~---------~l~~~~da---~~L-Pf 164 (518)
-|.+..-++ +|.+||-+ |+|. |..+..+++ .| .+|++++.++.. ..++..+. +.+ ..
T Consensus 135 ~l~~~~~~~~~~~~~~g~~VlV~gg~G~vG~~a~qla~~~G-a~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~~~ 213 (346)
T 3fbg_A 135 TLFDVFGISRNRNENEGKTLLIINGAGGVGSIATQIAKAYG-LRVITTASRNETIEWTKKMGADIVLNHKESLLNQFKTQ 213 (346)
T ss_dssp HHHTTSCCCSSHHHHTTCEEEEESTTSHHHHHHHHHHHHTT-CEEEEECCSHHHHHHHHHHTCSEEECTTSCHHHHHHHH
T ss_pred HHHHhcCCccccccCCCCEEEEEcCCCHHHHHHHHHHHHcC-CEEEEEeCCHHHHHHHHhcCCcEEEECCccHHHHHHHh
Confidence 344455566 89999999 4555 666655544 67 499999975311 01111000 000 01
Q ss_pred CCCceeEEEEcCceeeccCChHHHHHHHHhcccCCcEEEEEe
Q 010086 165 DGNTFDFVFVGGARLEKASKPLDFASEIVRTLKPEGFAVVHV 206 (518)
Q Consensus 165 ~D~SFD~V~s~~~~l~~~~dp~~~l~Ei~RVLKPGG~lvi~~ 206 (518)
....||+|+.... ....+++..+.|+|||.++...
T Consensus 214 ~~~g~Dvv~d~~g-------~~~~~~~~~~~l~~~G~iv~~~ 248 (346)
T 3fbg_A 214 GIELVDYVFCTFN-------TDMYYDDMIQLVKPRGHIATIV 248 (346)
T ss_dssp TCCCEEEEEESSC-------HHHHHHHHHHHEEEEEEEEESS
T ss_pred CCCCccEEEECCC-------chHHHHHHHHHhccCCEEEEEC
Confidence 2346999998653 2345788999999999987643
No 341
>4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A*
Probab=79.05 E-value=1.1 Score=44.52 Aligned_cols=94 Identities=12% Similarity=0.075 Sum_probs=58.0
Q ss_pred HHHHHHHHcCCCCCCCeEEEEcCCC--CHhHHHH-HhcCCCcEEEEecCCCC---------C-cEEeccCCCC-----CC
Q 010086 103 SVFQDLISEGYLSQSAKSLCVETQY--GQDVFAL-KEIGVEDSIGIFKKSSK---------P-LVISGEGHRI-----PF 164 (518)
Q Consensus 103 ~l~~~L~~~gll~~~~rvLDVGcGt--G~~~~~L-~~~g~~~v~gID~s~~~---------~-l~~~~da~~L-----Pf 164 (518)
..++-|.+.+.++++.+||-.|++. |..+..+ +..| .+|++++.++.. . .++.....++ ..
T Consensus 136 tA~~al~~~~~~~~g~~vlI~Ga~g~iG~~~~~~a~~~G-a~Vi~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 214 (336)
T 4b7c_A 136 TAYFALLDVGQPKNGETVVISGAAGAVGSVAGQIARLKG-CRVVGIAGGAEKCRFLVEELGFDGAIDYKNEDLAAGLKRE 214 (336)
T ss_dssp HHHHHHHHTTCCCTTCEEEESSTTSHHHHHHHHHHHHTT-CEEEEEESSHHHHHHHHHTTCCSEEEETTTSCHHHHHHHH
T ss_pred HHHHHHHHhcCCCCCCEEEEECCCCHHHHHHHHHHHHCC-CEEEEEeCCHHHHHHHHHHcCCCEEEECCCHHHHHHHHHh
Confidence 3344455666789999999999933 6655444 4467 499999976310 0 0111000000 00
Q ss_pred CCCceeEEEEcCceeeccCChHHHHHHHHhcccCCcEEEEE
Q 010086 165 DGNTFDFVFVGGARLEKASKPLDFASEIVRTLKPEGFAVVH 205 (518)
Q Consensus 165 ~D~SFD~V~s~~~~l~~~~dp~~~l~Ei~RVLKPGG~lvi~ 205 (518)
..+.+|+|+.... ...+.+..+.|+|||.+++.
T Consensus 215 ~~~~~d~vi~~~g--------~~~~~~~~~~l~~~G~iv~~ 247 (336)
T 4b7c_A 215 CPKGIDVFFDNVG--------GEILDTVLTRIAFKARIVLC 247 (336)
T ss_dssp CTTCEEEEEESSC--------HHHHHHHHTTEEEEEEEEEC
T ss_pred cCCCceEEEECCC--------cchHHHHHHHHhhCCEEEEE
Confidence 1246999998653 13688899999999998774
No 342
>4a2c_A Galactitol-1-phosphate 5-dehydrogenase; oxidoreductase, metal binding-site; 1.87A {Escherichia coli}
Probab=78.27 E-value=1.7 Score=43.33 Aligned_cols=90 Identities=9% Similarity=0.036 Sum_probs=54.6
Q ss_pred HHcCCCCCCCeEEEEcCCC-CHhHHHH-HhcCCCcEEEEecCCCC---------CcEEeccCCCCC-----C-CCCceeE
Q 010086 109 ISEGYLSQSAKSLCVETQY-GQDVFAL-KEIGVEDSIGIFKKSSK---------PLVISGEGHRIP-----F-DGNTFDF 171 (518)
Q Consensus 109 ~~~gll~~~~rvLDVGcGt-G~~~~~L-~~~g~~~v~gID~s~~~---------~l~~~~da~~LP-----f-~D~SFD~ 171 (518)
.....++++.+||-.|+|. |..+..+ +..|...++++|.++.. ..++.......+ . ...-+|+
T Consensus 153 ~~~~~~~~g~~VlV~GaG~vG~~aiq~ak~~G~~~vi~~~~~~~k~~~a~~lGa~~~i~~~~~~~~~~~~~~~~~~g~d~ 232 (346)
T 4a2c_A 153 FHLAQGCENKNVIIIGAGTIGLLAIQCAVALGAKSVTAIDISSEKLALAKSFGAMQTFNSSEMSAPQMQSVLRELRFNQL 232 (346)
T ss_dssp HHHTTCCTTSEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTTCSEEEETTTSCHHHHHHHHGGGCSSEE
T ss_pred HHHhccCCCCEEEEECCCCcchHHHHHHHHcCCcEEEEEechHHHHHHHHHcCCeEEEeCCCCCHHHHHHhhcccCCccc
Confidence 3445578999999999987 4444444 44676677899976421 111111100000 0 1234788
Q ss_pred EEEcCceeeccCChHHHHHHHHhcccCCcEEEEE
Q 010086 172 VFVGGARLEKASKPLDFASEIVRTLKPEGFAVVH 205 (518)
Q Consensus 172 V~s~~~~l~~~~dp~~~l~Ei~RVLKPGG~lvi~ 205 (518)
|+.... -...++...+.|+|||.+++.
T Consensus 233 v~d~~G-------~~~~~~~~~~~l~~~G~~v~~ 259 (346)
T 4a2c_A 233 ILETAG-------VPQTVELAVEIAGPHAQLALV 259 (346)
T ss_dssp EEECSC-------SHHHHHHHHHHCCTTCEEEEC
T ss_pred cccccc-------ccchhhhhhheecCCeEEEEE
Confidence 876543 124678889999999998875
No 343
>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A
Probab=77.45 E-value=0.75 Score=46.53 Aligned_cols=87 Identities=17% Similarity=0.064 Sum_probs=53.4
Q ss_pred CCCCCCCeEEEEcCCC-CHhHHHHHh-cCCCcEEEEecCCCCC---------cEEeccCC-CC--CCCCCceeEEEEcCc
Q 010086 112 GYLSQSAKSLCVETQY-GQDVFALKE-IGVEDSIGIFKKSSKP---------LVISGEGH-RI--PFDGNTFDFVFVGGA 177 (518)
Q Consensus 112 gll~~~~rvLDVGcGt-G~~~~~L~~-~g~~~v~gID~s~~~~---------l~~~~da~-~L--Pf~D~SFD~V~s~~~ 177 (518)
.-+++|.+||-+|+|. |..+..+++ .| .+|++++.++... .++..... ++ ... +.||+|+....
T Consensus 175 ~~~~~g~~VlV~GaG~vG~~~~qlak~~G-a~Vi~~~~~~~~~~~~~~lGa~~v~~~~~~~~~~~~~~-~~~D~vid~~g 252 (360)
T 1piw_A 175 NGCGPGKKVGIVGLGGIGSMGTLISKAMG-AETYVISRSSRKREDAMKMGADHYIATLEEGDWGEKYF-DTFDLIVVCAS 252 (360)
T ss_dssp TTCSTTCEEEEECCSHHHHHHHHHHHHHT-CEEEEEESSSTTHHHHHHHTCSEEEEGGGTSCHHHHSC-SCEEEEEECCS
T ss_pred cCCCCCCEEEEECCCHHHHHHHHHHHHCC-CEEEEEcCCHHHHHHHHHcCCCEEEcCcCchHHHHHhh-cCCCEEEECCC
Confidence 4578999999999965 666655544 67 4799999875321 11111111 10 011 46999997653
Q ss_pred eeeccCChHHHHHHHHhcccCCcEEEEE
Q 010086 178 RLEKASKPLDFASEIVRTLKPEGFAVVH 205 (518)
Q Consensus 178 ~l~~~~dp~~~l~Ei~RVLKPGG~lvi~ 205 (518)
-. +...+++..+.|+|||+++..
T Consensus 253 -~~----~~~~~~~~~~~l~~~G~iv~~ 275 (360)
T 1piw_A 253 -SL----TDIDFNIMPKAMKVGGRIVSI 275 (360)
T ss_dssp -CS----TTCCTTTGGGGEEEEEEEEEC
T ss_pred -CC----cHHHHHHHHHHhcCCCEEEEe
Confidence 10 012356678999999988764
No 344
>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus}
Probab=76.78 E-value=1.5 Score=43.98 Aligned_cols=93 Identities=19% Similarity=0.252 Sum_probs=57.9
Q ss_pred HHHHHHHHcCCCCCCCeEEEEcC-CC-CHhHHHHH-hcCCCcEEEEecCCCC---------CcEEeccCCCC-----C-C
Q 010086 103 SVFQDLISEGYLSQSAKSLCVET-QY-GQDVFALK-EIGVEDSIGIFKKSSK---------PLVISGEGHRI-----P-F 164 (518)
Q Consensus 103 ~l~~~L~~~gll~~~~rvLDVGc-Gt-G~~~~~L~-~~g~~~v~gID~s~~~---------~l~~~~da~~L-----P-f 164 (518)
..+.-+...+.+++|.+||-.|+ |. |..+..++ ..| .+|++++.++.. ..++..+ .++ . .
T Consensus 146 ta~~~l~~~~~~~~g~~VlV~Gasg~iG~~~~~~a~~~G-a~Vi~~~~~~~~~~~~~~~ga~~v~~~~-~~~~~~v~~~~ 223 (342)
T 4eye_A 146 TMYFAYARRGQLRAGETVLVLGAAGGIGTAAIQIAKGMG-AKVIAVVNRTAATEFVKSVGADIVLPLE-EGWAKAVREAT 223 (342)
T ss_dssp HHHHHHHTTSCCCTTCEEEESSTTSHHHHHHHHHHHHTT-CEEEEEESSGGGHHHHHHHTCSEEEESS-TTHHHHHHHHT
T ss_pred HHHHHHHHhcCCCCCCEEEEECCCCHHHHHHHHHHHHcC-CEEEEEeCCHHHHHHHHhcCCcEEecCc-hhHHHHHHHHh
Confidence 34444556667889999999998 33 66654444 467 599999976421 1111111 110 0 1
Q ss_pred CCCceeEEEEcCceeeccCChHHHHHHHHhcccCCcEEEEE
Q 010086 165 DGNTFDFVFVGGARLEKASKPLDFASEIVRTLKPEGFAVVH 205 (518)
Q Consensus 165 ~D~SFD~V~s~~~~l~~~~dp~~~l~Ei~RVLKPGG~lvi~ 205 (518)
....+|+|+.... - ..+.+..+.|+|||.+++.
T Consensus 224 ~~~g~Dvvid~~g-~-------~~~~~~~~~l~~~G~iv~~ 256 (342)
T 4eye_A 224 GGAGVDMVVDPIG-G-------PAFDDAVRTLASEGRLLVV 256 (342)
T ss_dssp TTSCEEEEEESCC----------CHHHHHHTEEEEEEEEEC
T ss_pred CCCCceEEEECCc-h-------hHHHHHHHhhcCCCEEEEE
Confidence 2236999998654 1 1477889999999998774
No 345
>4dcm_A Ribosomal RNA large subunit methyltransferase G; 23S rRNA (guanine1835-N2)-methyltransferase; HET: SAM; 2.30A {Escherichia coli}
Probab=76.74 E-value=22 Score=36.19 Aligned_cols=84 Identities=10% Similarity=-0.025 Sum_probs=49.3
Q ss_pred CCCeEEEEcCCCCHhHHHHHhcCCCcEEEEecCC--------------CCC-cEEeccCCCCCCCCCceeEEEEcCceee
Q 010086 116 QSAKSLCVETQYGQDVFALKEIGVEDSIGIFKKS--------------SKP-LVISGEGHRIPFDGNTFDFVFVGGARLE 180 (518)
Q Consensus 116 ~~~rvLDVGcGtG~~~~~L~~~g~~~v~gID~s~--------------~~~-l~~~~da~~LPf~D~SFD~V~s~~~~l~ 180 (518)
.+.+||.|+.+-|.++..|...+ ++.+.-|- ... .+...+ .+.=..+.+|+|+...- .
T Consensus 38 ~~~~~~~~~d~~gal~~~~~~~~---~~~~~ds~~~~~~~~~n~~~~~~~~~~~~~~~--~~~~~~~~~~~v~~~lp--k 110 (375)
T 4dcm_A 38 IRGPVLILNDAFGALSCALAEHK---PYSIGDSYISELATRENLRLNGIDESSVKFLD--STADYPQQPGVVLIKVP--K 110 (375)
T ss_dssp CCSCEEEECCSSSHHHHHTGGGC---CEEEESCHHHHHHHHHHHHHTTCCGGGSEEEE--TTSCCCSSCSEEEEECC--S
T ss_pred CCCCEEEECCCCCHHHHhhccCC---ceEEEhHHHHHHHHHHHHHHcCCCccceEecc--cccccccCCCEEEEEcC--C
Confidence 55789999999999988886443 34442120 000 011111 11122457899887542 2
Q ss_pred ccCChHHHHHHHHhcccCCcEEEEEe
Q 010086 181 KASKPLDFASEIVRTLKPEGFAVVHV 206 (518)
Q Consensus 181 ~~~dp~~~l~Ei~RVLKPGG~lvi~~ 206 (518)
+.......+..+...|+||+.+++.-
T Consensus 111 ~~~~l~~~L~~l~~~l~~~~~i~~~g 136 (375)
T 4dcm_A 111 TLALLEQQLRALRKVVTSDTRIIAGA 136 (375)
T ss_dssp CHHHHHHHHHHHHTTCCTTSEEEEEE
T ss_pred CHHHHHHHHHHHHhhCCCCCEEEEEe
Confidence 22223346788999999999986654
No 346
>3jwh_A HEN1; methyltransferase; HET: SAH; 2.20A {Anabaena variabilis} PDB: 3jwj_A
Probab=76.72 E-value=2 Score=39.51 Aligned_cols=40 Identities=15% Similarity=0.159 Sum_probs=30.7
Q ss_pred CCceEEEEeCCCCCCcchhhhhhhhCCCCCcceEEEEEcCCccchH
Q 010086 317 KNRYVYVDVGARSYGSSIGSWFKKQYPKQNKTFDVYAIEADKTFHE 362 (518)
Q Consensus 317 ~~r~V~iD~GAn~~g~sv~~~F~~~YP~~~~~f~V~afE~np~~~~ 362 (518)
.+..-++|+|++ .|. ++.++.+.+|.. +|+++|.+|...+
T Consensus 28 ~~~~~vLDiGcG-~G~-~~~~l~~~~~~~----~v~gvD~s~~~~~ 67 (217)
T 3jwh_A 28 SNARRVIDLGCG-QGN-LLKILLKDSFFE----QITGVDVSYRSLE 67 (217)
T ss_dssp TTCCEEEEETCT-TCH-HHHHHHHCTTCS----EEEEEESCHHHHH
T ss_pred cCCCEEEEeCCC-CCH-HHHHHHhhCCCC----EEEEEECCHHHHH
Confidence 456689999999 485 546777777743 8999999998654
No 347
>1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A*
Probab=76.71 E-value=4.2 Score=40.62 Aligned_cols=86 Identities=20% Similarity=0.148 Sum_probs=53.7
Q ss_pred CCCCCCCeEEEEcCCC--CHhH-HHHHhc-CCCcEEEEecCCCC---------CcEEeccCCC----C-CCCC-CceeEE
Q 010086 112 GYLSQSAKSLCVETQY--GQDV-FALKEI-GVEDSIGIFKKSSK---------PLVISGEGHR----I-PFDG-NTFDFV 172 (518)
Q Consensus 112 gll~~~~rvLDVGcGt--G~~~-~~L~~~-g~~~v~gID~s~~~---------~l~~~~da~~----L-Pf~D-~SFD~V 172 (518)
.-++++.+||..|+|. |..+ +.++.. | .+|+++|.++.. ..++.....+ + ...+ +.+|+|
T Consensus 166 ~~~~~g~~vlV~Gagg~iG~~~~~~a~~~~G-a~Vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~v 244 (347)
T 1jvb_A 166 ASLDPTKTLLVVGAGGGLGTMAVQIAKAVSG-ATIIGVDVREEAVEAAKRAGADYVINASMQDPLAEIRRITESKGVDAV 244 (347)
T ss_dssp TTCCTTCEEEEETTTSHHHHHHHHHHHHHTC-CEEEEEESSHHHHHHHHHHTCSEEEETTTSCHHHHHHHHTTTSCEEEE
T ss_pred cCCCCCCEEEEECCCccHHHHHHHHHHHcCC-CeEEEEcCCHHHHHHHHHhCCCEEecCCCccHHHHHHHHhcCCCceEE
Confidence 5578999999999985 4444 344456 7 589999976311 1111111000 0 0111 479999
Q ss_pred EEcCceeeccCChHHHHHHHHhcccCCcEEEEE
Q 010086 173 FVGGARLEKASKPLDFASEIVRTLKPEGFAVVH 205 (518)
Q Consensus 173 ~s~~~~l~~~~dp~~~l~Ei~RVLKPGG~lvi~ 205 (518)
+.... ....+++..+.|+|||.+++.
T Consensus 245 i~~~g-------~~~~~~~~~~~l~~~G~iv~~ 270 (347)
T 1jvb_A 245 IDLNN-------SEKTLSVYPKALAKQGKYVMV 270 (347)
T ss_dssp EESCC-------CHHHHTTGGGGEEEEEEEEEC
T ss_pred EECCC-------CHHHHHHHHHHHhcCCEEEEE
Confidence 98653 124677889999999988764
No 348
>2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A*
Probab=76.48 E-value=4.7 Score=40.60 Aligned_cols=78 Identities=14% Similarity=0.085 Sum_probs=50.5
Q ss_pred CCeEEEEcCCC-CHhHHHH-HhcCCCcEEEEecCC---CCCc-------EEeccCCCCCCCC------CceeEEEEcCce
Q 010086 117 SAKSLCVETQY-GQDVFAL-KEIGVEDSIGIFKKS---SKPL-------VISGEGHRIPFDG------NTFDFVFVGGAR 178 (518)
Q Consensus 117 ~~rvLDVGcGt-G~~~~~L-~~~g~~~v~gID~s~---~~~l-------~~~~da~~LPf~D------~SFD~V~s~~~~ 178 (518)
+.+||-+|+|. |..+..+ +..|. +|+++|.++ .... -.. | .+ .+.+ +.+|+|+....
T Consensus 181 g~~VlV~GaG~vG~~~~q~a~~~Ga-~Vi~~~~~~~~~~~~~~~~~~ga~~v-~-~~-~~~~~~~~~~~~~d~vid~~g- 255 (366)
T 2cdc_A 181 CRKVLVVGTGPIGVLFTLLFRTYGL-EVWMANRREPTEVEQTVIEETKTNYY-N-SS-NGYDKLKDSVGKFDVIIDATG- 255 (366)
T ss_dssp TCEEEEESCHHHHHHHHHHHHHHTC-EEEEEESSCCCHHHHHHHHHHTCEEE-E-CT-TCSHHHHHHHCCEEEEEECCC-
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCC-EEEEEeCCccchHHHHHHHHhCCcee-c-hH-HHHHHHHHhCCCCCEEEECCC-
Confidence 99999999954 5555333 44674 999999865 2110 011 3 22 2221 45999998654
Q ss_pred eeccCChHHHH-HHHHhcccCCcEEEEE
Q 010086 179 LEKASKPLDFA-SEIVRTLKPEGFAVVH 205 (518)
Q Consensus 179 l~~~~dp~~~l-~Ei~RVLKPGG~lvi~ 205 (518)
- + ..+ +++.+.|+|||.+++.
T Consensus 256 ~-----~-~~~~~~~~~~l~~~G~iv~~ 277 (366)
T 2cdc_A 256 A-----D-VNILGNVIPLLGRNGVLGLF 277 (366)
T ss_dssp C-----C-THHHHHHGGGEEEEEEEEEC
T ss_pred C-----h-HHHHHHHHHHHhcCCEEEEE
Confidence 1 1 246 8899999999998775
No 349
>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A*
Probab=76.28 E-value=4.8 Score=39.76 Aligned_cols=90 Identities=18% Similarity=0.138 Sum_probs=56.2
Q ss_pred HHHHcCCCCCCCeEEEEc-CCC-CHhHHHHH-hcCCCcEEEEecCCCC---------CcEEeccCCCC------CCCCCc
Q 010086 107 DLISEGYLSQSAKSLCVE-TQY-GQDVFALK-EIGVEDSIGIFKKSSK---------PLVISGEGHRI------PFDGNT 168 (518)
Q Consensus 107 ~L~~~gll~~~~rvLDVG-cGt-G~~~~~L~-~~g~~~v~gID~s~~~---------~l~~~~da~~L------Pf~D~S 168 (518)
.+...+-+++|.+||-.| +|. |..+..++ ..| .+|++++.++.. ..++.....++ -.....
T Consensus 131 ~l~~~~~~~~g~~VlV~Ga~g~iG~~~~~~a~~~G-a~Vi~~~~~~~~~~~~~~~Ga~~~~~~~~~~~~~~~~~~~~~~g 209 (325)
T 3jyn_A 131 LLRQTYQVKPGEIILFHAAAGGVGSLACQWAKALG-AKLIGTVSSPEKAAHAKALGAWETIDYSHEDVAKRVLELTDGKK 209 (325)
T ss_dssp HHHTTSCCCTTCEEEESSTTSHHHHHHHHHHHHHT-CEEEEEESSHHHHHHHHHHTCSEEEETTTSCHHHHHHHHTTTCC
T ss_pred HHHHhcCCCCCCEEEEEcCCcHHHHHHHHHHHHCC-CEEEEEeCCHHHHHHHHHcCCCEEEeCCCccHHHHHHHHhCCCC
Confidence 344556688999999999 443 66654444 467 589999976311 11111111100 012347
Q ss_pred eeEEEEcCceeeccCChHHHHHHHHhcccCCcEEEEE
Q 010086 169 FDFVFVGGARLEKASKPLDFASEIVRTLKPEGFAVVH 205 (518)
Q Consensus 169 FD~V~s~~~~l~~~~dp~~~l~Ei~RVLKPGG~lvi~ 205 (518)
+|+|+.... - ..+.+..+.|+|||.+++.
T Consensus 210 ~Dvvid~~g-~-------~~~~~~~~~l~~~G~iv~~ 238 (325)
T 3jyn_A 210 CPVVYDGVG-Q-------DTWLTSLDSVAPRGLVVSF 238 (325)
T ss_dssp EEEEEESSC-G-------GGHHHHHTTEEEEEEEEEC
T ss_pred ceEEEECCC-h-------HHHHHHHHHhcCCCEEEEE
Confidence 999998654 1 3477889999999998875
No 350
>1i4w_A Mitochondrial replication protein MTF1; mitochondrial transcription factor, transcription initiation; 2.60A {Saccharomyces cerevisiae} SCOP: c.66.1.24
Probab=76.22 E-value=2.5 Score=43.45 Aligned_cols=34 Identities=15% Similarity=-0.023 Sum_probs=28.2
Q ss_pred CCCeEEEEcCCCCHhHHHHHhc-CCCcEEEEecCC
Q 010086 116 QSAKSLCVETQYGQDVFALKEI-GVEDSIGIFKKS 149 (518)
Q Consensus 116 ~~~rvLDVGcGtG~~~~~L~~~-g~~~v~gID~s~ 149 (518)
++..||+||.|.|.++..|.+. ...++++|++.+
T Consensus 58 ~~~~VlEIGPG~G~LT~~Ll~~~~~~~vvavE~D~ 92 (353)
T 1i4w_A 58 EELKVLDLYPGVGIQSAIFYNKYCPRQYSLLEKRS 92 (353)
T ss_dssp TTCEEEEESCTTCHHHHHHHHHHCCSEEEEECCCH
T ss_pred CCCEEEEECCCCCHHHHHHHhhCCCCEEEEEecCH
Confidence 3589999999999999998874 336899999864
No 351
>3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii}
Probab=75.49 E-value=1.8 Score=42.88 Aligned_cols=87 Identities=17% Similarity=0.080 Sum_probs=52.8
Q ss_pred HcCCCCCCCeEEEEc-CCC-CHhHHHHHh-cCCCcEEEEecCCCC--------CcEEeccCCC-CCCCCCceeEEEEcCc
Q 010086 110 SEGYLSQSAKSLCVE-TQY-GQDVFALKE-IGVEDSIGIFKKSSK--------PLVISGEGHR-IPFDGNTFDFVFVGGA 177 (518)
Q Consensus 110 ~~gll~~~~rvLDVG-cGt-G~~~~~L~~-~g~~~v~gID~s~~~--------~l~~~~da~~-LPf~D~SFD~V~s~~~ 177 (518)
+..-+++|.+||-+| +|. |..+..+++ .| .+|++++..+.. ..++.....+ +.-.-..+|+|+....
T Consensus 146 ~~~~~~~g~~vlV~Ga~G~vG~~a~q~a~~~G-a~vi~~~~~~~~~~~~~lGa~~~i~~~~~~~~~~~~~g~D~v~d~~g 224 (321)
T 3tqh_A 146 NQAEVKQGDVVLIHAGAGGVGHLAIQLAKQKG-TTVITTASKRNHAFLKALGAEQCINYHEEDFLLAISTPVDAVIDLVG 224 (321)
T ss_dssp HHTTCCTTCEEEESSTTSHHHHHHHHHHHHTT-CEEEEEECHHHHHHHHHHTCSEEEETTTSCHHHHCCSCEEEEEESSC
T ss_pred HhcCCCCCCEEEEEcCCcHHHHHHHHHHHHcC-CEEEEEeccchHHHHHHcCCCEEEeCCCcchhhhhccCCCEEEECCC
Confidence 556689999999997 665 776655554 57 588888743210 0111111100 0000035999997653
Q ss_pred eeeccCChHHHHHHHHhcccCCcEEEEE
Q 010086 178 RLEKASKPLDFASEIVRTLKPEGFAVVH 205 (518)
Q Consensus 178 ~l~~~~dp~~~l~Ei~RVLKPGG~lvi~ 205 (518)
...+.+..+.|+|||.++..
T Consensus 225 --------~~~~~~~~~~l~~~G~iv~~ 244 (321)
T 3tqh_A 225 --------GDVGIQSIDCLKETGCIVSV 244 (321)
T ss_dssp --------HHHHHHHGGGEEEEEEEEEC
T ss_pred --------cHHHHHHHHhccCCCEEEEe
Confidence 12348899999999998874
No 352
>3e05_A Precorrin-6Y C5,15-methyltransferase (decarboxyla; porphyrin metabolism, S-adenosyl-methionine; 1.80A {Geobacter metallireducens} SCOP: c.66.1.0
Probab=74.61 E-value=3.7 Score=37.32 Aligned_cols=55 Identities=22% Similarity=0.361 Sum_probs=38.5
Q ss_pred ccCCceEEEEeCCCCCCcchhhhhhhhCCCCCcceEEEEEcCCccchHhhc------cCCceEEEee
Q 010086 315 SFKNRYVYVDVGARSYGSSIGSWFKKQYPKQNKTFDVYAIEADKTFHEEYK------VKKKVKLLPY 375 (518)
Q Consensus 315 s~~~r~V~iD~GAn~~g~sv~~~F~~~YP~~~~~f~V~afE~np~~~~~~~------~~~~V~~~~~ 375 (518)
..+++..++|+|++. |. ++..+.+.+|.. +|+++|.+|...+..+ ..++++++..
T Consensus 37 ~~~~~~~vLDiG~G~-G~-~~~~la~~~~~~----~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~ 97 (204)
T 3e05_A 37 RLQDDLVMWDIGAGS-AS-VSIEASNLMPNG----RIFALERNPQYLGFIRDNLKKFVARNVTLVEA 97 (204)
T ss_dssp TCCTTCEEEEETCTT-CH-HHHHHHHHCTTS----EEEEEECCHHHHHHHHHHHHHHTCTTEEEEEC
T ss_pred CCCCCCEEEEECCCC-CH-HHHHHHHHCCCC----EEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeC
Confidence 345678899999994 75 556777778743 8999999998644322 2356766653
No 353
>3mq2_A 16S rRNA methyltransferase; methyltranferase, ribosomal, antibiotic resistance, aminoglycoside, S-adenosyl-L-methionine; HET: SAH; 1.69A {Streptomyces SP}
Probab=74.46 E-value=5.5 Score=36.45 Aligned_cols=41 Identities=32% Similarity=0.267 Sum_probs=32.5
Q ss_pred cCCceEEEEeCCCCCCcchhhhhhhhCCCCCcceEEEEEcCCccchH
Q 010086 316 FKNRYVYVDVGARSYGSSIGSWFKKQYPKQNKTFDVYAIEADKTFHE 362 (518)
Q Consensus 316 ~~~r~V~iD~GAn~~g~sv~~~F~~~YP~~~~~f~V~afE~np~~~~ 362 (518)
.+++..++|+|++ .|. ++..+.+.+|. .+|+++|.++...+
T Consensus 25 ~~~~~~vLDiGcG-~G~-~~~~la~~~p~----~~v~gvD~s~~~l~ 65 (218)
T 3mq2_A 25 SQYDDVVLDVGTG-DGK-HPYKVARQNPS----RLVVALDADKSRME 65 (218)
T ss_dssp TTSSEEEEEESCT-TCH-HHHHHHHHCTT----EEEEEEESCGGGGH
T ss_pred ccCCCEEEEecCC-CCH-HHHHHHHHCCC----CEEEEEECCHHHHH
Confidence 4678889999999 485 55788888884 38999999998433
No 354
>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae}
Probab=74.17 E-value=1.5 Score=44.02 Aligned_cols=85 Identities=14% Similarity=0.014 Sum_probs=52.6
Q ss_pred CCCCCCeEEEEcCC--CCHhHH-HHHhcCCCcEEEEecCCCCCcE-------EeccCC---CCC-----CCCCceeEEEE
Q 010086 113 YLSQSAKSLCVETQ--YGQDVF-ALKEIGVEDSIGIFKKSSKPLV-------ISGEGH---RIP-----FDGNTFDFVFV 174 (518)
Q Consensus 113 ll~~~~rvLDVGcG--tG~~~~-~L~~~g~~~v~gID~s~~~~l~-------~~~da~---~LP-----f~D~SFD~V~s 174 (518)
-++++.+||.+|++ .|..+. .++..| .+|+++|.++..... ..-|.. ++. ..++.+|+|+.
T Consensus 166 ~~~~g~~vlV~Ga~ggiG~~~~~~a~~~G-a~V~~~~~~~~~~~~~~~~g~~~~~d~~~~~~~~~~~~~~~~~~~D~vi~ 244 (347)
T 2hcy_A 166 NLMAGHWVAISGAAGGLGSLAVQYAKAMG-YRVLGIDGGEGKEELFRSIGGEVFIDFTKEKDIVGAVLKATDGGAHGVIN 244 (347)
T ss_dssp TCCTTCEEEEETTTSHHHHHHHHHHHHTT-CEEEEEECSTTHHHHHHHTTCCEEEETTTCSCHHHHHHHHHTSCEEEEEE
T ss_pred CCCCCCEEEEECCCchHHHHHHHHHHHCC-CcEEEEcCCHHHHHHHHHcCCceEEecCccHhHHHHHHHHhCCCCCEEEE
Confidence 47889999999994 355553 344467 589999976421000 001111 100 00125899988
Q ss_pred cCceeeccCChHHHHHHHHhcccCCcEEEEE
Q 010086 175 GGARLEKASKPLDFASEIVRTLKPEGFAVVH 205 (518)
Q Consensus 175 ~~~~l~~~~dp~~~l~Ei~RVLKPGG~lvi~ 205 (518)
... ....++++.+.|+|||.++..
T Consensus 245 ~~g-------~~~~~~~~~~~l~~~G~iv~~ 268 (347)
T 2hcy_A 245 VSV-------SEAAIEASTRYVRANGTTVLV 268 (347)
T ss_dssp CSS-------CHHHHHHHTTSEEEEEEEEEC
T ss_pred CCC-------cHHHHHHHHHHHhcCCEEEEE
Confidence 654 124678899999999988764
No 355
>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A*
Probab=73.99 E-value=1.5 Score=43.59 Aligned_cols=89 Identities=18% Similarity=0.124 Sum_probs=54.7
Q ss_pred HHHcCCCCCCCeEEEEcC-CC-CHhHHHHH-hcCCCcEEEEecCCCC---------CcEEeccCCCC-----C-CCCCce
Q 010086 108 LISEGYLSQSAKSLCVET-QY-GQDVFALK-EIGVEDSIGIFKKSSK---------PLVISGEGHRI-----P-FDGNTF 169 (518)
Q Consensus 108 L~~~gll~~~~rvLDVGc-Gt-G~~~~~L~-~~g~~~v~gID~s~~~---------~l~~~~da~~L-----P-f~D~SF 169 (518)
+...+-+++|.+||-+|+ |. |..+..+. ..| .+|++++.++.. ..++.....++ . .....+
T Consensus 140 l~~~~~~~~g~~vlV~Ga~g~iG~~~~~~a~~~G-a~Vi~~~~~~~~~~~~~~~ga~~~~~~~~~~~~~~~~~~~~~~g~ 218 (334)
T 3qwb_A 140 TNEAYHVKKGDYVLLFAAAGGVGLILNQLLKMKG-AHTIAVASTDEKLKIAKEYGAEYLINASKEDILRQVLKFTNGKGV 218 (334)
T ss_dssp HHTTSCCCTTCEEEESSTTBHHHHHHHHHHHHTT-CEEEEEESSHHHHHHHHHTTCSEEEETTTSCHHHHHHHHTTTSCE
T ss_pred HHHhccCCCCCEEEEECCCCHHHHHHHHHHHHCC-CEEEEEeCCHHHHHHHHHcCCcEEEeCCCchHHHHHHHHhCCCCc
Confidence 444456789999999995 33 65554444 467 589999975311 11111111100 0 113469
Q ss_pred eEEEEcCceeeccCChHHHHHHHHhcccCCcEEEEE
Q 010086 170 DFVFVGGARLEKASKPLDFASEIVRTLKPEGFAVVH 205 (518)
Q Consensus 170 D~V~s~~~~l~~~~dp~~~l~Ei~RVLKPGG~lvi~ 205 (518)
|+|+.... - ..++...+.|+|||.++..
T Consensus 219 D~vid~~g-~-------~~~~~~~~~l~~~G~iv~~ 246 (334)
T 3qwb_A 219 DASFDSVG-K-------DTFEISLAALKRKGVFVSF 246 (334)
T ss_dssp EEEEECCG-G-------GGHHHHHHHEEEEEEEEEC
T ss_pred eEEEECCC-h-------HHHHHHHHHhccCCEEEEE
Confidence 99998654 1 3577888999999998775
No 356
>1nt2_A Fibrillarin-like PRE-rRNA processing protein; adeMet, binding motif, RNA binding protein; HET: SAM; 2.90A {Archaeoglobus fulgidus} SCOP: c.66.1.3
Probab=73.47 E-value=4.7 Score=37.52 Aligned_cols=54 Identities=19% Similarity=0.194 Sum_probs=36.6
Q ss_pred cccCCceEEEEeCCCCCCcchhhhhhhhCCCCCcceEEEEEcCCccch----HhhccCCceEEE
Q 010086 314 ISFKNRYVYVDVGARSYGSSIGSWFKKQYPKQNKTFDVYAIEADKTFH----EEYKVKKKVKLL 373 (518)
Q Consensus 314 ~s~~~r~V~iD~GAn~~g~sv~~~F~~~YP~~~~~f~V~afE~np~~~----~~~~~~~~V~~~ 373 (518)
+.++++..++|+|++. |. ++.++.+.+|. .+|+++|.+|... +.-+..+||+++
T Consensus 53 ~~~~~g~~VLDlGcGt-G~-~~~~la~~~~~----~~V~gvD~s~~~l~~~~~~a~~~~~v~~~ 110 (210)
T 1nt2_A 53 LKLRGDERVLYLGAAS-GT-TVSHLADIVDE----GIIYAVEYSAKPFEKLLELVRERNNIIPL 110 (210)
T ss_dssp CCCCSSCEEEEETCTT-SH-HHHHHHHHTTT----SEEEEECCCHHHHHHHHHHHHHCSSEEEE
T ss_pred cCCCCCCEEEEECCcC-CH-HHHHHHHHcCC----CEEEEEECCHHHHHHHHHHHhcCCCeEEE
Confidence 3456778899999994 85 54678877772 2799999999742 222234566544
No 357
>1g8a_A Fibrillarin-like PRE-rRNA processing protein; rRNA binding, RNA binding, structural genomics, BSGC structure funded by NIH; 1.40A {Pyrococcus horikoshii} SCOP: c.66.1.3 PDB: 2nnw_B 3nmu_F* 3nvk_I* 3nvm_B 1pry_A
Probab=72.99 E-value=5.2 Score=36.97 Aligned_cols=54 Identities=13% Similarity=0.113 Sum_probs=36.3
Q ss_pred cCCceEEEEeCCCCCCcchhhhhhhhCCCCCcceEEEEEcCCccch----HhhccCCceEEEe
Q 010086 316 FKNRYVYVDVGARSYGSSIGSWFKKQYPKQNKTFDVYAIEADKTFH----EEYKVKKKVKLLP 374 (518)
Q Consensus 316 ~~~r~V~iD~GAn~~g~sv~~~F~~~YP~~~~~f~V~afE~np~~~----~~~~~~~~V~~~~ 374 (518)
++++..++|+|++. |. ++.++.+.++.+ .+|+++|.+|... +.....++|+++.
T Consensus 71 ~~~~~~vLDlG~G~-G~-~~~~la~~~~~~---~~v~~vD~s~~~~~~~~~~~~~~~~v~~~~ 128 (227)
T 1g8a_A 71 IKPGKSVLYLGIAS-GT-TASHVSDIVGWE---GKIFGIEFSPRVLRELVPIVEERRNIVPIL 128 (227)
T ss_dssp CCTTCEEEEETTTS-TT-HHHHHHHHHCTT---SEEEEEESCHHHHHHHHHHHSSCTTEEEEE
T ss_pred CCCCCEEEEEeccC-CH-HHHHHHHHhCCC---eEEEEEECCHHHHHHHHHHHhccCCCEEEE
Confidence 55778899999994 75 556777665321 2799999999643 2233346777655
No 358
>1g60_A Adenine-specific methyltransferase MBOIIA; structural genomics, DNA methylation, S- adenosylmethionine, PSI, protein structure initiative; HET: SAM; 1.74A {Moraxella bovis} SCOP: c.66.1.11
Probab=72.92 E-value=2.3 Score=41.08 Aligned_cols=21 Identities=10% Similarity=0.284 Sum_probs=18.2
Q ss_pred HHHHHHHHhcccCCcEEEEEe
Q 010086 186 LDFASEIVRTLKPEGFAVVHV 206 (518)
Q Consensus 186 ~~~l~Ei~RVLKPGG~lvi~~ 206 (518)
...+.|+.|+|||||.+++..
T Consensus 54 ~~~l~~~~~~Lk~~g~i~v~~ 74 (260)
T 1g60_A 54 YRWIDKVLDKLDKDGSLYIFN 74 (260)
T ss_dssp HHHHHHHHHHEEEEEEEEEEE
T ss_pred HHHHHHHHHHhcCCeEEEEEc
Confidence 467899999999999998875
No 359
>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A*
Probab=72.89 E-value=3.1 Score=42.06 Aligned_cols=83 Identities=14% Similarity=0.082 Sum_probs=49.8
Q ss_pred CC-CCCeEEEEcCCC-CHhHHHHH-hcCCCcEEEEecCCCCC----------cEEec-cCCCC-CCCCCceeEEEEcCce
Q 010086 114 LS-QSAKSLCVETQY-GQDVFALK-EIGVEDSIGIFKKSSKP----------LVISG-EGHRI-PFDGNTFDFVFVGGAR 178 (518)
Q Consensus 114 l~-~~~rvLDVGcGt-G~~~~~L~-~~g~~~v~gID~s~~~~----------l~~~~-da~~L-Pf~D~SFD~V~s~~~~ 178 (518)
++ +|.+||-+|+|. |..+..++ ..| .+|++++.++... .++.. +...+ ... +.+|+|+....
T Consensus 184 ~~~~g~~VlV~GaG~vG~~~~q~a~~~G-a~Vi~~~~~~~~~~~~~~~lGa~~v~~~~~~~~~~~~~-~~~D~vid~~g- 260 (366)
T 1yqd_A 184 LDEPGKHIGIVGLGGLGHVAVKFAKAFG-SKVTVISTSPSKKEEALKNFGADSFLVSRDQEQMQAAA-GTLDGIIDTVS- 260 (366)
T ss_dssp CCCTTCEEEEECCSHHHHHHHHHHHHTT-CEEEEEESCGGGHHHHHHTSCCSEEEETTCHHHHHHTT-TCEEEEEECCS-
T ss_pred cCCCCCEEEEECCCHHHHHHHHHHHHCC-CEEEEEeCCHHHHHHHHHhcCCceEEeccCHHHHHHhh-CCCCEEEECCC-
Confidence 45 899999999875 66554444 467 5899999764210 01110 00000 011 36999997653
Q ss_pred eeccCChHHHHHHHHhcccCCcEEEEE
Q 010086 179 LEKASKPLDFASEIVRTLKPEGFAVVH 205 (518)
Q Consensus 179 l~~~~dp~~~l~Ei~RVLKPGG~lvi~ 205 (518)
-. ..+++..+.|+|||.++..
T Consensus 261 ~~------~~~~~~~~~l~~~G~iv~~ 281 (366)
T 1yqd_A 261 AV------HPLLPLFGLLKSHGKLILV 281 (366)
T ss_dssp SC------CCSHHHHHHEEEEEEEEEC
T ss_pred cH------HHHHHHHHHHhcCCEEEEE
Confidence 11 1256778899999987765
No 360
>2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A*
Probab=72.69 E-value=3.1 Score=41.73 Aligned_cols=92 Identities=9% Similarity=0.056 Sum_probs=56.1
Q ss_pred HHHHHHcCCCCCC--CeEEEEcCCC--CHhH-HHHHhcCCCcEEEEecCCCC---------CcEEeccCCCCC-------
Q 010086 105 FQDLISEGYLSQS--AKSLCVETQY--GQDV-FALKEIGVEDSIGIFKKSSK---------PLVISGEGHRIP------- 163 (518)
Q Consensus 105 ~~~L~~~gll~~~--~rvLDVGcGt--G~~~-~~L~~~g~~~v~gID~s~~~---------~l~~~~da~~LP------- 163 (518)
++-|...+.++++ .+||-.|++. |..+ +.++..|..+|++++.++.. ...+ .|..+-.
T Consensus 147 ~~al~~~~~~~~g~~~~vlI~GasggiG~~~~~~a~~~Ga~~Vi~~~~~~~~~~~~~~~~g~~~~-~d~~~~~~~~~~~~ 225 (357)
T 2zb4_A 147 LIGIQEKGHITAGSNKTMVVSGAAGACGSVAGQIGHFLGCSRVVGICGTHEKCILLTSELGFDAA-INYKKDNVAEQLRE 225 (357)
T ss_dssp HHHHHHHSCCCTTSCCEEEESSTTBHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTSCCSEE-EETTTSCHHHHHHH
T ss_pred HHHHHHhcCCCCCCccEEEEECCCcHHHHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHcCCceE-EecCchHHHHHHHH
Confidence 3344455667899 9999999843 5544 33444674489999976310 0011 1111100
Q ss_pred CCCCceeEEEEcCceeeccCChHHHHHHHHhcccCCcEEEEE
Q 010086 164 FDGNTFDFVFVGGARLEKASKPLDFASEIVRTLKPEGFAVVH 205 (518)
Q Consensus 164 f~D~SFD~V~s~~~~l~~~~dp~~~l~Ei~RVLKPGG~lvi~ 205 (518)
...+.+|+|+.... ...+++..+.|+|||++++.
T Consensus 226 ~~~~~~d~vi~~~G--------~~~~~~~~~~l~~~G~iv~~ 259 (357)
T 2zb4_A 226 SCPAGVDVYFDNVG--------GNISDTVISQMNENSHIILC 259 (357)
T ss_dssp HCTTCEEEEEESCC--------HHHHHHHHHTEEEEEEEEEC
T ss_pred hcCCCCCEEEECCC--------HHHHHHHHHHhccCcEEEEE
Confidence 01126999998653 14678899999999998764
No 361
>2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A*
Probab=72.53 E-value=1.9 Score=43.45 Aligned_cols=84 Identities=13% Similarity=0.166 Sum_probs=51.0
Q ss_pred CCC-CCCeEEEEcCCC-CHhHHHHHh-cCCCcEEEEecCCCCC----------cEEec-cCCCC-CCCCCceeEEEEcCc
Q 010086 113 YLS-QSAKSLCVETQY-GQDVFALKE-IGVEDSIGIFKKSSKP----------LVISG-EGHRI-PFDGNTFDFVFVGGA 177 (518)
Q Consensus 113 ll~-~~~rvLDVGcGt-G~~~~~L~~-~g~~~v~gID~s~~~~----------l~~~~-da~~L-Pf~D~SFD~V~s~~~ 177 (518)
-++ +|++||-+|+|. |..+..+++ .| .+|++++.++... .++.. +...+ .. .+.+|+|+....
T Consensus 176 ~~~~~g~~VlV~GaG~vG~~a~qlak~~G-a~Vi~~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~-~~g~D~vid~~g 253 (357)
T 2cf5_A 176 GLKQPGLRGGILGLGGVGHMGVKIAKAMG-HHVTVISSSNKKREEALQDLGADDYVIGSDQAKMSEL-ADSLDYVIDTVP 253 (357)
T ss_dssp STTSTTCEEEEECCSHHHHHHHHHHHHHT-CEEEEEESSTTHHHHHHTTSCCSCEEETTCHHHHHHS-TTTEEEEEECCC
T ss_pred CCCCCCCEEEEECCCHHHHHHHHHHHHCC-CeEEEEeCChHHHHHHHHHcCCceeeccccHHHHHHh-cCCCCEEEECCC
Confidence 356 899999999876 666655544 67 5899999864210 01110 00000 01 135999997653
Q ss_pred eeeccCChHHHHHHHHhcccCCcEEEEE
Q 010086 178 RLEKASKPLDFASEIVRTLKPEGFAVVH 205 (518)
Q Consensus 178 ~l~~~~dp~~~l~Ei~RVLKPGG~lvi~ 205 (518)
-. ..+++..+.|+|||.++..
T Consensus 254 -~~------~~~~~~~~~l~~~G~iv~~ 274 (357)
T 2cf5_A 254 -VH------HALEPYLSLLKLDGKLILM 274 (357)
T ss_dssp -SC------CCSHHHHTTEEEEEEEEEC
T ss_pred -Ch------HHHHHHHHHhccCCEEEEe
Confidence 11 1256778999999998774
No 362
>3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A
Probab=71.76 E-value=9.6 Score=39.70 Aligned_cols=85 Identities=15% Similarity=0.123 Sum_probs=53.4
Q ss_pred CCCCCCCeEEEEcC-CC-CHhHHHHHh-cCCCcEEEEecCCCC---------CcEEeccCCCCC----------------
Q 010086 112 GYLSQSAKSLCVET-QY-GQDVFALKE-IGVEDSIGIFKKSSK---------PLVISGEGHRIP---------------- 163 (518)
Q Consensus 112 gll~~~~rvLDVGc-Gt-G~~~~~L~~-~g~~~v~gID~s~~~---------~l~~~~da~~LP---------------- 163 (518)
.-+++|.+||-+|+ |. |..+..+++ .| .++++++.++.. ..++.....+..
T Consensus 224 ~~~~~g~~VlV~GasG~vG~~avqlak~~G-a~vi~~~~~~~~~~~~~~lGa~~vi~~~~~d~~~~~~~~~~~~~~~~~~ 302 (456)
T 3krt_A 224 AGMKQGDNVLIWGASGGLGSYATQFALAGG-ANPICVVSSPQKAEICRAMGAEAIIDRNAEGYRFWKDENTQDPKEWKRF 302 (456)
T ss_dssp TCCCTTCEEEETTTTSHHHHHHHHHHHHTT-CEEEEEESSHHHHHHHHHHTCCEEEETTTTTCCSEEETTEECHHHHHHH
T ss_pred cCCCCCCEEEEECCCCHHHHHHHHHHHHcC-CeEEEEECCHHHHHHHHhhCCcEEEecCcCcccccccccccchHHHHHH
Confidence 45789999999998 54 666655554 56 588888865310 111111111111
Q ss_pred -------CCCCceeEEEEcCceeeccCChHHHHHHHHhcccCCcEEEEE
Q 010086 164 -------FDGNTFDFVFVGGARLEKASKPLDFASEIVRTLKPEGFAVVH 205 (518)
Q Consensus 164 -------f~D~SFD~V~s~~~~l~~~~dp~~~l~Ei~RVLKPGG~lvi~ 205 (518)
.....+|+|+.... ...+....+.|+|||.+++.
T Consensus 303 ~~~i~~~t~g~g~Dvvid~~G--------~~~~~~~~~~l~~~G~iv~~ 343 (456)
T 3krt_A 303 GKRIRELTGGEDIDIVFEHPG--------RETFGASVFVTRKGGTITTC 343 (456)
T ss_dssp HHHHHHHHTSCCEEEEEECSC--------HHHHHHHHHHEEEEEEEEES
T ss_pred HHHHHHHhCCCCCcEEEEcCC--------chhHHHHHHHhhCCcEEEEE
Confidence 01247999987653 14678889999999998874
No 363
>2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A*
Probab=71.74 E-value=2.3 Score=42.34 Aligned_cols=91 Identities=14% Similarity=0.030 Sum_probs=55.9
Q ss_pred HHHHHHcCCCCCCCeEEEEcC-C-CCHhHHHH-HhcCCCcEEEEecCCCC---------CcEEeccCCCC-CC-------
Q 010086 105 FQDLISEGYLSQSAKSLCVET-Q-YGQDVFAL-KEIGVEDSIGIFKKSSK---------PLVISGEGHRI-PF------- 164 (518)
Q Consensus 105 ~~~L~~~gll~~~~rvLDVGc-G-tG~~~~~L-~~~g~~~v~gID~s~~~---------~l~~~~da~~L-Pf------- 164 (518)
++-+.+..-++++.+||..|+ | .|..+..+ +..| .+|++++.++.. ...+ .|..+. .+
T Consensus 144 ~~al~~~~~~~~g~~vlI~Ga~g~iG~~~~~~a~~~G-~~V~~~~~~~~~~~~~~~~~g~~~~-~d~~~~~~~~~~~~~~ 221 (345)
T 2j3h_A 144 YAGFYEVCSPKEGETVYVSAASGAVGQLVGQLAKMMG-CYVVGSAGSKEKVDLLKTKFGFDDA-FNYKEESDLTAALKRC 221 (345)
T ss_dssp HHHHHTTSCCCTTCEEEESSTTSHHHHHHHHHHHHTT-CEEEEEESSHHHHHHHHHTSCCSEE-EETTSCSCSHHHHHHH
T ss_pred HHHHHHHhCCCCCCEEEEECCCcHHHHHHHHHHHHCC-CEEEEEeCCHHHHHHHHHHcCCceE-EecCCHHHHHHHHHHH
Confidence 334445556789999999998 3 36655443 4467 589999976310 0011 111110 11
Q ss_pred CCCceeEEEEcCceeeccCChHHHHHHHHhcccCCcEEEEE
Q 010086 165 DGNTFDFVFVGGARLEKASKPLDFASEIVRTLKPEGFAVVH 205 (518)
Q Consensus 165 ~D~SFD~V~s~~~~l~~~~dp~~~l~Ei~RVLKPGG~lvi~ 205 (518)
..+.+|+|+.... ...+++..+.|+|||.+++.
T Consensus 222 ~~~~~d~vi~~~g--------~~~~~~~~~~l~~~G~~v~~ 254 (345)
T 2j3h_A 222 FPNGIDIYFENVG--------GKMLDAVLVNMNMHGRIAVC 254 (345)
T ss_dssp CTTCEEEEEESSC--------HHHHHHHHTTEEEEEEEEEC
T ss_pred hCCCCcEEEECCC--------HHHHHHHHHHHhcCCEEEEE
Confidence 1146999998654 13678899999999998764
No 364
>3tka_A Ribosomal RNA small subunit methyltransferase H; HET: SAM CTN PG4; 2.25A {Escherichia coli}
Probab=71.17 E-value=3.2 Score=42.51 Aligned_cols=48 Identities=6% Similarity=0.018 Sum_probs=36.4
Q ss_pred HHHHHHHHHcCCCCCCCeEEEEcCCCCHhHHHHHhc-C-CCcEEEEecCC
Q 010086 102 SSVFQDLISEGYLSQSAKSLCVETQYGQDVFALKEI-G-VEDSIGIFKKS 149 (518)
Q Consensus 102 ~~l~~~L~~~gll~~~~rvLDVGcGtG~~~~~L~~~-g-~~~v~gID~s~ 149 (518)
+-++++.++.-.+++|+.++|..||.|..+.++.+. | .+.|+|+|.++
T Consensus 43 pVLl~Evl~~L~i~pggiyVD~TlG~GGHS~~iL~~lg~~GrVig~D~Dp 92 (347)
T 3tka_A 43 TVLLDEAVNGLNIRPDGIYIDGTFGRGGHSRLILSQLGEEGRLLAIDRDP 92 (347)
T ss_dssp CTTTHHHHHHTCCCTTCEEEESCCTTSHHHHHHHTTCCTTCEEEEEESCH
T ss_pred cccHHHHHHhhCCCCCCEEEEeCcCCCHHHHHHHHhCCCCCEEEEEECCH
Confidence 345555555545789999999999999999877653 4 46899999864
No 365
>1fbn_A MJ fibrillarin homologue; MJ proteins, ribosomal RNA processing, snoRNP, structural genomics, BSGC structure funded by NIH; 1.60A {Methanocaldococcus jannaschii} SCOP: c.66.1.3 PDB: 1g8s_A
Probab=70.78 E-value=6.4 Score=36.68 Aligned_cols=53 Identities=23% Similarity=0.221 Sum_probs=36.8
Q ss_pred cCCceEEEEeCCCCCCcchhhhhhhhCCCCCcceEEEEEcCCccchHhh----ccCCceEEEe
Q 010086 316 FKNRYVYVDVGARSYGSSIGSWFKKQYPKQNKTFDVYAIEADKTFHEEY----KVKKKVKLLP 374 (518)
Q Consensus 316 ~~~r~V~iD~GAn~~g~sv~~~F~~~YP~~~~~f~V~afE~np~~~~~~----~~~~~V~~~~ 374 (518)
++++..++|+|++. |. ++.++.+.+|.. +|+++|.+|...+.. ...++|+++.
T Consensus 72 ~~~~~~VLDlGcG~-G~-~~~~la~~~~~~----~v~gvD~s~~~~~~a~~~~~~~~~v~~~~ 128 (230)
T 1fbn_A 72 IKRDSKILYLGASA-GT-TPSHVADIADKG----IVYAIEYAPRIMRELLDACAERENIIPIL 128 (230)
T ss_dssp CCTTCEEEEESCCS-SH-HHHHHHHHTTTS----EEEEEESCHHHHHHHHHHTTTCTTEEEEE
T ss_pred CCCCCEEEEEcccC-CH-HHHHHHHHcCCc----EEEEEECCHHHHHHHHHHhhcCCCeEEEE
Confidence 45778899999994 85 557888888732 799999999754322 2235555443
No 366
>2fpo_A Methylase YHHF; structural genomics, putative methyltransferase, PSI, protei structure initiative; HET: MSE; 2.05A {Escherichia coli} SCOP: c.66.1.46
Probab=69.92 E-value=24 Score=32.07 Aligned_cols=38 Identities=24% Similarity=0.242 Sum_probs=26.8
Q ss_pred CceEEEEeCCCCCCcchhhhhhhhCCCCCcceEEEEEcCCccchH
Q 010086 318 NRYVYVDVGARSYGSSIGSWFKKQYPKQNKTFDVYAIEADKTFHE 362 (518)
Q Consensus 318 ~r~V~iD~GAn~~g~sv~~~F~~~YP~~~~~f~V~afE~np~~~~ 362 (518)
++..++|+|++. |. ++-++.+.... +|+++|.+|...+
T Consensus 54 ~~~~vLDlgcG~-G~-~~~~l~~~~~~-----~V~~vD~s~~~l~ 91 (202)
T 2fpo_A 54 VDAQCLDCFAGS-GA-LGLEALSRYAA-----GATLIEMDRAVSQ 91 (202)
T ss_dssp TTCEEEETTCTT-CH-HHHHHHHTTCS-----EEEEECSCHHHHH
T ss_pred CCCeEEEeCCCc-CH-HHHHHHhcCCC-----EEEEEECCHHHHH
Confidence 356789999994 74 43455554432 7999999998654
No 367
>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli}
Probab=69.75 E-value=2.3 Score=42.75 Aligned_cols=92 Identities=13% Similarity=0.164 Sum_probs=55.1
Q ss_pred HHHHHHcCCCCCCCeEEEEcC-CC-CHhHHHH-HhcCCCcEEEEecCCCC---------CcEEeccCCCCC-----CCCC
Q 010086 105 FQDLISEGYLSQSAKSLCVET-QY-GQDVFAL-KEIGVEDSIGIFKKSSK---------PLVISGEGHRIP-----FDGN 167 (518)
Q Consensus 105 ~~~L~~~gll~~~~rvLDVGc-Gt-G~~~~~L-~~~g~~~v~gID~s~~~---------~l~~~~da~~LP-----f~D~ 167 (518)
+.-+.+..-++++.+||-.|+ |. |..+..+ +..| .+|++++.++.. ..++.....++. ....
T Consensus 156 ~~~l~~~~~~~~g~~VlV~Gg~g~iG~~~~~~a~~~G-a~Vi~~~~~~~~~~~~~~lGa~~~~~~~~~~~~~~~~~~~~~ 234 (353)
T 4dup_A 156 WANLFQMAGLTEGESVLIHGGTSGIGTTAIQLARAFG-AEVYATAGSTGKCEACERLGAKRGINYRSEDFAAVIKAETGQ 234 (353)
T ss_dssp HHHHTTTTCCCTTCEEEESSTTSHHHHHHHHHHHHTT-CEEEEEESSHHHHHHHHHHTCSEEEETTTSCHHHHHHHHHSS
T ss_pred HHHHHHhcCCCCCCEEEEEcCCCHHHHHHHHHHHHcC-CEEEEEeCCHHHHHHHHhcCCCEEEeCCchHHHHHHHHHhCC
Confidence 334445566889999999954 43 6655444 4467 589999976321 111111100000 0024
Q ss_pred ceeEEEEcCceeeccCChHHHHHHHHhcccCCcEEEEE
Q 010086 168 TFDFVFVGGARLEKASKPLDFASEIVRTLKPEGFAVVH 205 (518)
Q Consensus 168 SFD~V~s~~~~l~~~~dp~~~l~Ei~RVLKPGG~lvi~ 205 (518)
.+|+|+.... - ..+.+..+.|+|||.+++.
T Consensus 235 g~Dvvid~~g-~-------~~~~~~~~~l~~~G~iv~~ 264 (353)
T 4dup_A 235 GVDIILDMIG-A-------AYFERNIASLAKDGCLSII 264 (353)
T ss_dssp CEEEEEESCC-G-------GGHHHHHHTEEEEEEEEEC
T ss_pred CceEEEECCC-H-------HHHHHHHHHhccCCEEEEE
Confidence 6999998654 1 2477889999999998775
No 368
>1eg2_A Modification methylase RSRI; rossmann fold, exocyclic amino DNA methyltransferase RSRI, D binding, DNA modification, DNA methylation; HET: MTA; 1.75A {Rhodobacter sphaeroides} SCOP: c.66.1.11 PDB: 1nw5_A* 1nw6_A* 1nw7_A* 1nw8_A
Probab=69.70 E-value=2.6 Score=42.44 Aligned_cols=23 Identities=22% Similarity=0.276 Sum_probs=19.5
Q ss_pred HHHHHHHHhcccCCcEEEEEecC
Q 010086 186 LDFASEIVRTLKPEGFAVVHVRA 208 (518)
Q Consensus 186 ~~~l~Ei~RVLKPGG~lvi~~~~ 208 (518)
...+.|+.|+|||||.+++....
T Consensus 86 ~~~l~~~~rvLk~~G~i~i~~~~ 108 (319)
T 1eg2_A 86 KRWLAEAERVLSPTGSIAIFGGL 108 (319)
T ss_dssp HHHHHHHHHHEEEEEEEEEEECS
T ss_pred HHHHHHHHHHcCCCeEEEEEcCc
Confidence 46789999999999999998653
No 369
>1yzh_A TRNA (guanine-N(7)-)-methyltransferase; alpha-beta-alpha sandwich, S-adenosylmeth dependent, structural genomics, PSI; 2.02A {Streptococcus pneumoniae} SCOP: c.66.1.53
Probab=69.03 E-value=7.2 Score=35.72 Aligned_cols=54 Identities=24% Similarity=0.254 Sum_probs=38.4
Q ss_pred CCceEEEEeCCCCCCcchhhhhhhhCCCCCcceEEEEEcCCccchHh----hc--cCCceEEEeec
Q 010086 317 KNRYVYVDVGARSYGSSIGSWFKKQYPKQNKTFDVYAIEADKTFHEE----YK--VKKKVKLLPYA 376 (518)
Q Consensus 317 ~~r~V~iD~GAn~~g~sv~~~F~~~YP~~~~~f~V~afE~np~~~~~----~~--~~~~V~~~~~A 376 (518)
+++..++|+|+|. |. ++..+.+.+|.. +|+++|.++...+. .. +.++|+++...
T Consensus 40 ~~~~~vLDiGcG~-G~-~~~~la~~~p~~----~v~gvD~s~~~l~~a~~~~~~~~~~~v~~~~~d 99 (214)
T 1yzh_A 40 NDNPIHVEVGSGK-GA-FVSGMAKQNPDI----NYIGIDIQKSVLSYALDKVLEVGVPNIKLLWVD 99 (214)
T ss_dssp SCCCEEEEESCTT-SH-HHHHHHHHCTTS----EEEEEESCHHHHHHHHHHHHHHCCSSEEEEECC
T ss_pred CCCCeEEEEccCc-CH-HHHHHHHHCCCC----CEEEEEcCHHHHHHHHHHHHHcCCCCEEEEeCC
Confidence 3578899999994 75 446777788843 89999999986432 11 23688877653
No 370
>4a27_A Synaptic vesicle membrane protein VAT-1 homolog-L; oxidoreductase; 2.10A {Homo sapiens}
Probab=68.77 E-value=2.9 Score=41.92 Aligned_cols=90 Identities=17% Similarity=0.106 Sum_probs=50.6
Q ss_pred HHHHcCCCCCCCeEEEEcCC-C-CHhHHHHHh-cCCCcEEEEecCCCC-------CcEEeccCCCC-----CCCCCceeE
Q 010086 107 DLISEGYLSQSAKSLCVETQ-Y-GQDVFALKE-IGVEDSIGIFKKSSK-------PLVISGEGHRI-----PFDGNTFDF 171 (518)
Q Consensus 107 ~L~~~gll~~~~rvLDVGcG-t-G~~~~~L~~-~g~~~v~gID~s~~~-------~l~~~~da~~L-----Pf~D~SFD~ 171 (518)
-+.+.+.+++|.+||-.|++ . |..+..+++ .|...|++++..... ..++. ...++ ....+.+|+
T Consensus 133 ~l~~~~~~~~g~~VlV~Ga~G~vG~~a~qla~~~g~~~V~~~~~~~~~~~~~~ga~~~~~-~~~~~~~~~~~~~~~g~Dv 211 (349)
T 4a27_A 133 MLFEVANLREGMSVLVHSAGGGVGQAVAQLCSTVPNVTVFGTASTFKHEAIKDSVTHLFD-RNADYVQEVKRISAEGVDI 211 (349)
T ss_dssp HHHTTSCCCTTCEEEESSTTSHHHHHHHHHHTTSTTCEEEEEECGGGHHHHGGGSSEEEE-TTSCHHHHHHHHCTTCEEE
T ss_pred HHHHhcCCCCCCEEEEEcCCcHHHHHHHHHHHHcCCcEEEEeCCHHHHHHHHcCCcEEEc-CCccHHHHHHHhcCCCceE
Confidence 34455678999999999994 3 666666655 454688888732110 00111 00000 011346999
Q ss_pred EEEcCceeeccCChHHHHHHHHhcccCCcEEEEE
Q 010086 172 VFVGGARLEKASKPLDFASEIVRTLKPEGFAVVH 205 (518)
Q Consensus 172 V~s~~~~l~~~~dp~~~l~Ei~RVLKPGG~lvi~ 205 (518)
|+.... - ..+.+..+.|+|||++++.
T Consensus 212 v~d~~g-~-------~~~~~~~~~l~~~G~~v~~ 237 (349)
T 4a27_A 212 VLDCLC-G-------DNTGKGLSLLKPLGTYILY 237 (349)
T ss_dssp EEEECC---------------CTTEEEEEEEEEE
T ss_pred EEECCC-c-------hhHHHHHHHhhcCCEEEEE
Confidence 986543 1 1246788999999998775
No 371
>3nx4_A Putative oxidoreductase; csgid, structural genomics, center for struc genomics of infectious diseases, PSI, protein structure INI; HET: MSE NAP; 1.90A {Salmonella enterica subsp} PDB: 1o89_A 1o8c_A*
Probab=68.71 E-value=15 Score=36.01 Aligned_cols=83 Identities=11% Similarity=0.123 Sum_probs=52.0
Q ss_pred CCCCC-eEEEEcC-CC-CHhHHHHHh-cCCCcEEEEecCCCC---------CcEEec-cCC-CCCCCCCceeEEEEcCce
Q 010086 114 LSQSA-KSLCVET-QY-GQDVFALKE-IGVEDSIGIFKKSSK---------PLVISG-EGH-RIPFDGNTFDFVFVGGAR 178 (518)
Q Consensus 114 l~~~~-rvLDVGc-Gt-G~~~~~L~~-~g~~~v~gID~s~~~---------~l~~~~-da~-~LPf~D~SFD~V~s~~~~ 178 (518)
++++. +||-.|+ |. |..+..+++ .| .+|++++.++.. ..++.. +.. ...+..+.+|+|+....
T Consensus 143 ~~~~~g~VlV~Ga~G~vG~~aiqla~~~G-a~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~~~~~~d~v~d~~g- 220 (324)
T 3nx4_A 143 IRPQDGEVVVTGASGGVGSTAVALLHKLG-YQVAAVSGRESTHGYLKSLGANRILSRDEFAESRPLEKQLWAGAIDTVG- 220 (324)
T ss_dssp CCGGGCCEEESSTTSHHHHHHHHHHHHTT-CCEEEEESCGGGHHHHHHHTCSEEEEGGGSSCCCSSCCCCEEEEEESSC-
T ss_pred cCCCCCeEEEECCCcHHHHHHHHHHHHcC-CEEEEEeCCHHHHHHHHhcCCCEEEecCCHHHHHhhcCCCccEEEECCC-
Confidence 45532 5999998 43 666655554 67 499999976421 111211 111 11233467999887543
Q ss_pred eeccCChHHHHHHHHhcccCCcEEEEE
Q 010086 179 LEKASKPLDFASEIVRTLKPEGFAVVH 205 (518)
Q Consensus 179 l~~~~dp~~~l~Ei~RVLKPGG~lvi~ 205 (518)
...+.+..+.|+|||+++..
T Consensus 221 -------~~~~~~~~~~l~~~G~iv~~ 240 (324)
T 3nx4_A 221 -------DKVLAKVLAQMNYGGCVAAC 240 (324)
T ss_dssp -------HHHHHHHHHTEEEEEEEEEC
T ss_pred -------cHHHHHHHHHHhcCCEEEEE
Confidence 12688999999999998875
No 372
>2ipx_A RRNA 2'-O-methyltransferase fibrillarin; FBL, structural genomics, structural genomics consortium, SGC; HET: MTA; 1.82A {Homo sapiens}
Probab=68.58 E-value=5.9 Score=36.87 Aligned_cols=54 Identities=22% Similarity=0.175 Sum_probs=35.9
Q ss_pred ccCCceEEEEeCCCCCCcchhhhhhhhC-CCCCcceEEEEEcCCccchH----hhccCCceEEEe
Q 010086 315 SFKNRYVYVDVGARSYGSSIGSWFKKQY-PKQNKTFDVYAIEADKTFHE----EYKVKKKVKLLP 374 (518)
Q Consensus 315 s~~~r~V~iD~GAn~~g~sv~~~F~~~Y-P~~~~~f~V~afE~np~~~~----~~~~~~~V~~~~ 374 (518)
.++++..++|+|++. |. ++.++.+.+ |.. +|+++|.+|...+ .-...++|+++.
T Consensus 74 ~~~~~~~vLDlG~G~-G~-~~~~la~~~g~~~----~v~gvD~s~~~i~~~~~~a~~~~~v~~~~ 132 (233)
T 2ipx_A 74 HIKPGAKVLYLGAAS-GT-TVSHVSDIVGPDG----LVYAVEFSHRSGRDLINLAKKRTNIIPVI 132 (233)
T ss_dssp CCCTTCEEEEECCTT-SH-HHHHHHHHHCTTC----EEEEECCCHHHHHHHHHHHHHCTTEEEEC
T ss_pred cCCCCCEEEEEcccC-CH-HHHHHHHHhCCCc----EEEEEECCHHHHHHHHHHhhccCCeEEEE
Confidence 356678899999994 85 556777776 433 7999999986422 222335665544
No 373
>2fca_A TRNA (guanine-N(7)-)-methyltransferase; 2.10A {Bacillus subtilis} SCOP: c.66.1.53
Probab=68.21 E-value=6.8 Score=36.26 Aligned_cols=52 Identities=29% Similarity=0.307 Sum_probs=37.8
Q ss_pred CceEEEEeCCCCCCcchhhhhhhhCCCCCcceEEEEEcCCccchHh----hc--cCCceEEEee
Q 010086 318 NRYVYVDVGARSYGSSIGSWFKKQYPKQNKTFDVYAIEADKTFHEE----YK--VKKKVKLLPY 375 (518)
Q Consensus 318 ~r~V~iD~GAn~~g~sv~~~F~~~YP~~~~~f~V~afE~np~~~~~----~~--~~~~V~~~~~ 375 (518)
++..++|+|++. |. ++..+.+.+|.. +|+++|.++...+. .. +.+||+++..
T Consensus 38 ~~~~vLDiGcG~-G~-~~~~la~~~p~~----~v~giD~s~~~l~~a~~~~~~~~~~nv~~~~~ 95 (213)
T 2fca_A 38 DNPIHIEVGTGK-GQ-FISGMAKQNPDI----NYIGIELFKSVIVTAVQKVKDSEAQNVKLLNI 95 (213)
T ss_dssp CCCEEEEECCTT-SH-HHHHHHHHCTTS----EEEEECSCHHHHHHHHHHHHHSCCSSEEEECC
T ss_pred CCceEEEEecCC-CH-HHHHHHHHCCCC----CEEEEEechHHHHHHHHHHHHcCCCCEEEEeC
Confidence 577899999994 85 446777788843 89999999986432 21 3467887765
No 374
>1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1
Probab=67.03 E-value=3.2 Score=41.81 Aligned_cols=91 Identities=14% Similarity=0.107 Sum_probs=56.2
Q ss_pred HHHHHHHcCCCCCCCeEEEEcCCC--CHhH-HHHHhcCCCcEEEEecCCCC---------CcEEeccCCCCC--------
Q 010086 104 VFQDLISEGYLSQSAKSLCVETQY--GQDV-FALKEIGVEDSIGIFKKSSK---------PLVISGEGHRIP-------- 163 (518)
Q Consensus 104 l~~~L~~~gll~~~~rvLDVGcGt--G~~~-~~L~~~g~~~v~gID~s~~~---------~l~~~~da~~LP-------- 163 (518)
.++-|...+-++++.+||-.|++. |..+ +.++..| .+|++++.++.. ..++ |..+-.
T Consensus 158 a~~al~~~~~~~~g~~vlV~GasggiG~~~~~~a~~~G-a~Vi~~~~~~~~~~~~~~~ga~~~~--d~~~~~~~~~~~~~ 234 (351)
T 1yb5_A 158 AYRALIHSACVKAGESVLVHGASGGVGLAACQIARAYG-LKILGTAGTEEGQKIVLQNGAHEVF--NHREVNYIDKIKKY 234 (351)
T ss_dssp HHHHHHTTSCCCTTCEEEEETCSSHHHHHHHHHHHHTT-CEEEEEESSHHHHHHHHHTTCSEEE--ETTSTTHHHHHHHH
T ss_pred HHHHHHHhhCCCCcCEEEEECCCChHHHHHHHHHHHCC-CEEEEEeCChhHHHHHHHcCCCEEE--eCCCchHHHHHHHH
Confidence 334444456678999999999833 5554 3344567 589999976311 0111 111101
Q ss_pred CCCCceeEEEEcCceeeccCChHHHHHHHHhcccCCcEEEEE
Q 010086 164 FDGNTFDFVFVGGARLEKASKPLDFASEIVRTLKPEGFAVVH 205 (518)
Q Consensus 164 f~D~SFD~V~s~~~~l~~~~dp~~~l~Ei~RVLKPGG~lvi~ 205 (518)
.....+|+|+.... ...+.+..+.|+|||.+++.
T Consensus 235 ~~~~~~D~vi~~~G--------~~~~~~~~~~l~~~G~iv~~ 268 (351)
T 1yb5_A 235 VGEKGIDIIIEMLA--------NVNLSKDLSLLSHGGRVIVV 268 (351)
T ss_dssp HCTTCEEEEEESCH--------HHHHHHHHHHEEEEEEEEEC
T ss_pred cCCCCcEEEEECCC--------hHHHHHHHHhccCCCEEEEE
Confidence 11236999998653 13577889999999998764
No 375
>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=66.32 E-value=2.2 Score=42.17 Aligned_cols=92 Identities=17% Similarity=0.111 Sum_probs=55.2
Q ss_pred HHHHHHcCCCCCCCeEEEEcCCC--CHhH-HHHHhcCCCcEEEEecCCCC---------CcEEeccCCC----C--CCCC
Q 010086 105 FQDLISEGYLSQSAKSLCVETQY--GQDV-FALKEIGVEDSIGIFKKSSK---------PLVISGEGHR----I--PFDG 166 (518)
Q Consensus 105 ~~~L~~~gll~~~~rvLDVGcGt--G~~~-~~L~~~g~~~v~gID~s~~~---------~l~~~~da~~----L--Pf~D 166 (518)
++-|...+-++++.+||-.|++. |..+ +.++..| .+|+++|.++.. ..++.....+ + -...
T Consensus 129 ~~al~~~~~~~~g~~vlV~Ga~ggiG~~~~~~a~~~G-~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 207 (327)
T 1qor_A 129 YYLLRKTYEIKPDEQFLFHAAAGGVGLIACQWAKALG-AKLIGTVGTAQKAQSALKAGAWQVINYREEDLVERLKEITGG 207 (327)
T ss_dssp HHHHHTTSCCCTTCEEEESSTTBHHHHHHHHHHHHHT-CEEEEEESSHHHHHHHHHHTCSEEEETTTSCHHHHHHHHTTT
T ss_pred HHHHHHhhCCCCCCEEEEECCCCHHHHHHHHHHHHcC-CEEEEEeCCHHHHHHHHHcCCCEEEECCCccHHHHHHHHhCC
Confidence 33444455678999999999533 5544 3344567 589999976310 1111100000 0 0112
Q ss_pred CceeEEEEcCceeeccCChHHHHHHHHhcccCCcEEEEE
Q 010086 167 NTFDFVFVGGARLEKASKPLDFASEIVRTLKPEGFAVVH 205 (518)
Q Consensus 167 ~SFD~V~s~~~~l~~~~dp~~~l~Ei~RVLKPGG~lvi~ 205 (518)
..+|+|+.... ...++++.+.|+|||.+++.
T Consensus 208 ~~~D~vi~~~g--------~~~~~~~~~~l~~~G~iv~~ 238 (327)
T 1qor_A 208 KKVRVVYDSVG--------RDTWERSLDCLQRRGLMVSF 238 (327)
T ss_dssp CCEEEEEECSC--------GGGHHHHHHTEEEEEEEEEC
T ss_pred CCceEEEECCc--------hHHHHHHHHHhcCCCEEEEE
Confidence 36999998653 23578889999999998765
No 376
>1xa0_A Putative NADPH dependent oxidoreductases; structural genomics, protein structure initiative, MCSG; HET: DTY; 2.80A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1
Probab=66.02 E-value=9.6 Score=37.51 Aligned_cols=85 Identities=13% Similarity=0.101 Sum_probs=52.0
Q ss_pred CCCCCCC-eEEEEcC-CC-CHhHHHHH-hcCCCcEEEEecCCCC---------CcEEec-cC--CC-CCCCCCceeEEEE
Q 010086 112 GYLSQSA-KSLCVET-QY-GQDVFALK-EIGVEDSIGIFKKSSK---------PLVISG-EG--HR-IPFDGNTFDFVFV 174 (518)
Q Consensus 112 gll~~~~-rvLDVGc-Gt-G~~~~~L~-~~g~~~v~gID~s~~~---------~l~~~~-da--~~-LPf~D~SFD~V~s 174 (518)
.-++++. +||-.|+ |. |..+..++ ..| .+|++++.++.. ..++.. +. .. .....+.+|+|+.
T Consensus 144 ~~~~~g~~~VlV~Ga~G~vG~~~~q~a~~~G-a~vi~~~~~~~~~~~~~~lGa~~~i~~~~~~~~~~~~~~~~~~d~vid 222 (328)
T 1xa0_A 144 HGLTPERGPVLVTGATGGVGSLAVSMLAKRG-YTVEASTGKAAEHDYLRVLGAKEVLAREDVMAERIRPLDKQRWAAAVD 222 (328)
T ss_dssp TTCCGGGCCEEESSTTSHHHHHHHHHHHHTT-CCEEEEESCTTCHHHHHHTTCSEEEECC---------CCSCCEEEEEE
T ss_pred cCCCCCCceEEEecCCCHHHHHHHHHHHHCC-CEEEEEECCHHHHHHHHHcCCcEEEecCCcHHHHHHHhcCCcccEEEE
Confidence 3467775 8999998 43 66664444 467 589999986421 111111 10 11 1123356999987
Q ss_pred cCceeeccCChHHHHHHHHhcccCCcEEEEE
Q 010086 175 GGARLEKASKPLDFASEIVRTLKPEGFAVVH 205 (518)
Q Consensus 175 ~~~~l~~~~dp~~~l~Ei~RVLKPGG~lvi~ 205 (518)
... . ..+.+..+.|+|||.+++.
T Consensus 223 ~~g------~--~~~~~~~~~l~~~G~~v~~ 245 (328)
T 1xa0_A 223 PVG------G--RTLATVLSRMRYGGAVAVS 245 (328)
T ss_dssp CST------T--TTHHHHHHTEEEEEEEEEC
T ss_pred CCc------H--HHHHHHHHhhccCCEEEEE
Confidence 653 1 2477889999999998764
No 377
>3p9n_A Possible methyltransferase (methylase); RV2966C, adoMet binding, RNA methylase, RSMD, SAM-fold, RNA methyltransferase; 1.90A {Mycobacterium tuberculosis}
Probab=65.99 E-value=60 Score=28.66 Aligned_cols=38 Identities=21% Similarity=0.183 Sum_probs=26.1
Q ss_pred CceEEEEeCCCCCCcchhhhhhhhCCCCCcceEEEEEcCCccchH
Q 010086 318 NRYVYVDVGARSYGSSIGSWFKKQYPKQNKTFDVYAIEADKTFHE 362 (518)
Q Consensus 318 ~r~V~iD~GAn~~g~sv~~~F~~~YP~~~~~f~V~afE~np~~~~ 362 (518)
+...++|+|++. |. ++.++.+ .+.. +|+++|.||...+
T Consensus 44 ~~~~vLDlgcG~-G~-~~~~~~~-~~~~----~v~~vD~~~~~~~ 81 (189)
T 3p9n_A 44 TGLAVLDLYAGS-GA-LGLEALS-RGAA----SVLFVESDQRSAA 81 (189)
T ss_dssp TTCEEEEETCTT-CH-HHHHHHH-TTCS----EEEEEECCHHHHH
T ss_pred CCCEEEEeCCCc-CH-HHHHHHH-CCCC----eEEEEECCHHHHH
Confidence 456789999994 74 4344544 2322 7999999998644
No 378
>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus}
Probab=65.93 E-value=11 Score=37.38 Aligned_cols=87 Identities=10% Similarity=0.085 Sum_probs=53.7
Q ss_pred HHHcCCCCCCCeEEEEcC--CCCHhHHHH-HhcCCCcEEEEecCCCC---------CcEEeccCCCCC--------CCCC
Q 010086 108 LISEGYLSQSAKSLCVET--QYGQDVFAL-KEIGVEDSIGIFKKSSK---------PLVISGEGHRIP--------FDGN 167 (518)
Q Consensus 108 L~~~gll~~~~rvLDVGc--GtG~~~~~L-~~~g~~~v~gID~s~~~---------~l~~~~da~~LP--------f~D~ 167 (518)
+...+-++++.+||..|+ |.|..+..+ +..| .+|++++.++.. ..++ |..+-. ....
T Consensus 158 l~~~~~~~~g~~vlV~Gasg~iG~~~~~~a~~~G-~~Vi~~~~~~~~~~~~~~~ga~~~~--d~~~~~~~~~~~~~~~~~ 234 (343)
T 2eih_A 158 VVDKLGVRPGDDVLVMAAGSGVSVAAIQIAKLFG-ARVIATAGSEDKLRRAKALGADETV--NYTHPDWPKEVRRLTGGK 234 (343)
T ss_dssp HTTTSCCCTTCEEEECSTTSTTHHHHHHHHHHTT-CEEEEEESSHHHHHHHHHHTCSEEE--ETTSTTHHHHHHHHTTTT
T ss_pred HHHhcCCCCCCEEEEECCCchHHHHHHHHHHHCC-CEEEEEeCCHHHHHHHHhcCCCEEE--cCCcccHHHHHHHHhCCC
Confidence 333345788999999998 346665444 4467 589999976311 1111 111101 1124
Q ss_pred ceeEEEEcCceeeccCChHHHHHHHHhcccCCcEEEEE
Q 010086 168 TFDFVFVGGARLEKASKPLDFASEIVRTLKPEGFAVVH 205 (518)
Q Consensus 168 SFD~V~s~~~~l~~~~dp~~~l~Ei~RVLKPGG~lvi~ 205 (518)
.+|+|+.... . ..++++.+.|+|||.++..
T Consensus 235 ~~d~vi~~~g--~------~~~~~~~~~l~~~G~~v~~ 264 (343)
T 2eih_A 235 GADKVVDHTG--A------LYFEGVIKATANGGRIAIA 264 (343)
T ss_dssp CEEEEEESSC--S------SSHHHHHHHEEEEEEEEES
T ss_pred CceEEEECCC--H------HHHHHHHHhhccCCEEEEE
Confidence 6999998653 1 2467888999999987764
No 379
>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A*
Probab=65.76 E-value=4 Score=41.18 Aligned_cols=91 Identities=21% Similarity=0.132 Sum_probs=55.9
Q ss_pred HHHHHcCCCCCCCeEEEEcC-CC-CHhHHHHH-hcCCCcEEEEecCCCC---------CcEEeccCCCC-----CCCCCc
Q 010086 106 QDLISEGYLSQSAKSLCVET-QY-GQDVFALK-EIGVEDSIGIFKKSSK---------PLVISGEGHRI-----PFDGNT 168 (518)
Q Consensus 106 ~~L~~~gll~~~~rvLDVGc-Gt-G~~~~~L~-~~g~~~v~gID~s~~~---------~l~~~~da~~L-----Pf~D~S 168 (518)
..+...+-++++.+||-.|+ |. |..+..++ ..| .+|++++.++.. ..++..+..++ ......
T Consensus 153 ~al~~~~~~~~g~~VlV~Ga~G~iG~~~~q~a~~~G-a~Vi~~~~~~~~~~~~~~~Ga~~~~~~~~~~~~~~~~~~~~~g 231 (362)
T 2c0c_A 153 ISLKELGGLSEGKKVLVTAAAGGTGQFAMQLSKKAK-CHVIGTCSSDEKSAFLKSLGCDRPINYKTEPVGTVLKQEYPEG 231 (362)
T ss_dssp HHHHHHTCCCTTCEEEETTTTBTTHHHHHHHHHHTT-CEEEEEESSHHHHHHHHHTTCSEEEETTTSCHHHHHHHHCTTC
T ss_pred HHHHHhcCCCCCCEEEEeCCCcHHHHHHHHHHHhCC-CEEEEEECCHHHHHHHHHcCCcEEEecCChhHHHHHHHhcCCC
Confidence 33444556789999999993 43 66664444 467 489999976311 11111111100 001246
Q ss_pred eeEEEEcCceeeccCChHHHHHHHHhcccCCcEEEEE
Q 010086 169 FDFVFVGGARLEKASKPLDFASEIVRTLKPEGFAVVH 205 (518)
Q Consensus 169 FD~V~s~~~~l~~~~dp~~~l~Ei~RVLKPGG~lvi~ 205 (518)
+|+|+.... ...++++.+.|+|||.+++.
T Consensus 232 ~D~vid~~g--------~~~~~~~~~~l~~~G~iv~~ 260 (362)
T 2c0c_A 232 VDVVYESVG--------GAMFDLAVDALATKGRLIVI 260 (362)
T ss_dssp EEEEEECSC--------THHHHHHHHHEEEEEEEEEC
T ss_pred CCEEEECCC--------HHHHHHHHHHHhcCCEEEEE
Confidence 999998653 14678899999999988764
No 380
>1tt7_A YHFP; alcohol dehydrogenase, Zn-dependent, NAD, structural genomics, protein structure initiative, PSI; 2.70A {Bacillus subtilis} SCOP: b.35.1.2 c.2.1.1 PDB: 1y9e_A*
Probab=65.08 E-value=14 Score=36.38 Aligned_cols=85 Identities=13% Similarity=0.092 Sum_probs=53.6
Q ss_pred CCCCCCC-eEEEEcC-CC-CHhHHHHH-hcCCCcEEEEecCCCC---------CcEEec-c--CCCC-CCCCCceeEEEE
Q 010086 112 GYLSQSA-KSLCVET-QY-GQDVFALK-EIGVEDSIGIFKKSSK---------PLVISG-E--GHRI-PFDGNTFDFVFV 174 (518)
Q Consensus 112 gll~~~~-rvLDVGc-Gt-G~~~~~L~-~~g~~~v~gID~s~~~---------~l~~~~-d--a~~L-Pf~D~SFD~V~s 174 (518)
.-++++. +||-.|+ |. |..+..++ ..| .+|++++.++.. ..++.. + ...+ ....+.+|+|+.
T Consensus 145 ~~~~~g~~~VlV~Ga~G~vG~~~~q~a~~~G-a~vi~~~~~~~~~~~~~~lGa~~v~~~~~~~~~~~~~~~~~~~d~vid 223 (330)
T 1tt7_A 145 NGLSPEKGSVLVTGATGGVGGIAVSMLNKRG-YDVVASTGNREAADYLKQLGASEVISREDVYDGTLKALSKQQWQGAVD 223 (330)
T ss_dssp TTCCGGGCCEEEESTTSHHHHHHHHHHHHHT-CCEEEEESSSSTHHHHHHHTCSEEEEHHHHCSSCCCSSCCCCEEEEEE
T ss_pred cCcCCCCceEEEECCCCHHHHHHHHHHHHCC-CEEEEEeCCHHHHHHHHHcCCcEEEECCCchHHHHHHhhcCCccEEEE
Confidence 3467775 9999998 43 66554444 467 579999986432 111111 1 1111 223457999987
Q ss_pred cCceeeccCChHHHHHHHHhcccCCcEEEEE
Q 010086 175 GGARLEKASKPLDFASEIVRTLKPEGFAVVH 205 (518)
Q Consensus 175 ~~~~l~~~~dp~~~l~Ei~RVLKPGG~lvi~ 205 (518)
... . ..+.+..+.|+|||++++.
T Consensus 224 ~~g------~--~~~~~~~~~l~~~G~iv~~ 246 (330)
T 1tt7_A 224 PVG------G--KQLASLLSKIQYGGSVAVS 246 (330)
T ss_dssp SCC------T--HHHHHHHTTEEEEEEEEEC
T ss_pred CCc------H--HHHHHHHHhhcCCCEEEEE
Confidence 653 1 3588899999999998764
No 381
>3mgg_A Methyltransferase; NYSGXRC, PSI-II, protein structure initiative, structural genomics, NEW YORK SGX research center for structural genomics; 1.86A {Methanosarcina mazei}
Probab=64.56 E-value=6.9 Score=37.13 Aligned_cols=54 Identities=19% Similarity=0.258 Sum_probs=38.9
Q ss_pred cCCceEEEEeCCCCCCcchhhhhhhhCCCCCcceEEEEEcCCccchHhhc------cCCceEEEee
Q 010086 316 FKNRYVYVDVGARSYGSSIGSWFKKQYPKQNKTFDVYAIEADKTFHEEYK------VKKKVKLLPY 375 (518)
Q Consensus 316 ~~~r~V~iD~GAn~~g~sv~~~F~~~YP~~~~~f~V~afE~np~~~~~~~------~~~~V~~~~~ 375 (518)
++++..++|+|+| .|. ++..+.+.+|.. +|+++|++|...+.-+ ..++++++..
T Consensus 35 ~~~~~~vLDiG~G-~G~-~~~~l~~~~~~~----~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~ 94 (276)
T 3mgg_A 35 YPPGAKVLEAGCG-IGA-QTVILAKNNPDA----EITSIDISPESLEKARENTEKNGIKNVKFLQA 94 (276)
T ss_dssp CCTTCEEEETTCT-TSH-HHHHHHHHCTTS----EEEEEESCHHHHHHHHHHHHHTTCCSEEEEEC
T ss_pred CCCCCeEEEecCC-CCH-HHHHHHHhCCCC----EEEEEECCHHHHHHHHHHHHHcCCCCcEEEEc
Confidence 4577889999999 485 557888888853 8999999998654322 2356776664
No 382
>1jsx_A Glucose-inhibited division protein B; methyltransferase fold, structural genomics, PSI, protein structure initiative; 2.40A {Escherichia coli} SCOP: c.66.1.20
Probab=63.47 E-value=11 Score=33.98 Aligned_cols=52 Identities=12% Similarity=0.116 Sum_probs=35.4
Q ss_pred CceEEEEeCCCCCCcchhhhhhhhCCCCCcceEEEEEcCCccchHhhc------cCCceEEEee
Q 010086 318 NRYVYVDVGARSYGSSIGSWFKKQYPKQNKTFDVYAIEADKTFHEEYK------VKKKVKLLPY 375 (518)
Q Consensus 318 ~r~V~iD~GAn~~g~sv~~~F~~~YP~~~~~f~V~afE~np~~~~~~~------~~~~V~~~~~ 375 (518)
++..++|+|++. |. ++..+.+.+|.. +|+++|.+|...+..+ ..++|+++..
T Consensus 65 ~~~~vLDiG~G~-G~-~~~~l~~~~~~~----~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~ 122 (207)
T 1jsx_A 65 QGERFIDVGTGP-GL-PGIPLSIVRPEA----HFTLLDSLGKRVRFLRQVQHELKLENIEPVQS 122 (207)
T ss_dssp CSSEEEEETCTT-TT-THHHHHHHCTTS----EEEEEESCHHHHHHHHHHHHHTTCSSEEEEEC
T ss_pred CCCeEEEECCCC-CH-HHHHHHHHCCCC----EEEEEeCCHHHHHHHHHHHHHcCCCCeEEEec
Confidence 356799999994 75 446777777743 8999999998643221 2345666553
No 383
>2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A*
Probab=63.36 E-value=14 Score=37.02 Aligned_cols=91 Identities=13% Similarity=0.016 Sum_probs=54.3
Q ss_pred HHHHHcCCCCCCCeEEEEcCCC--CHhHH-HHHhcCCCcEEEEecCCCC---------CcEEeccCCC----C--CCCCC
Q 010086 106 QDLISEGYLSQSAKSLCVETQY--GQDVF-ALKEIGVEDSIGIFKKSSK---------PLVISGEGHR----I--PFDGN 167 (518)
Q Consensus 106 ~~L~~~gll~~~~rvLDVGcGt--G~~~~-~L~~~g~~~v~gID~s~~~---------~l~~~~da~~----L--Pf~D~ 167 (518)
+-|...+-++++.+||-.|++. |..+. .++..| .+|+++|.++.. ...+..+..+ + -....
T Consensus 152 ~al~~~~~~~~g~~vlV~Ga~ggiG~~~~~~a~~~G-a~Vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 230 (354)
T 2j8z_A 152 QLLHLVGNVQAGDYVLIHAGLSGVGTAAIQLTRMAG-AIPLVTAGSQKKLQMAEKLGAAAGFNYKKEDFSEATLKFTKGA 230 (354)
T ss_dssp HHHTTTSCCCTTCEEEESSTTSHHHHHHHHHHHHTT-CEEEEEESCHHHHHHHHHHTCSEEEETTTSCHHHHHHHHTTTS
T ss_pred HHHHHhcCCCCCCEEEEECCccHHHHHHHHHHHHcC-CEEEEEeCCHHHHHHHHHcCCcEEEecCChHHHHHHHHHhcCC
Confidence 3343455678999999999533 55543 344467 589999976311 1111110000 0 01124
Q ss_pred ceeEEEEcCceeeccCChHHHHHHHHhcccCCcEEEEE
Q 010086 168 TFDFVFVGGARLEKASKPLDFASEIVRTLKPEGFAVVH 205 (518)
Q Consensus 168 SFD~V~s~~~~l~~~~dp~~~l~Ei~RVLKPGG~lvi~ 205 (518)
.+|+|+.... - ..+.+..+.|||||.+++.
T Consensus 231 ~~d~vi~~~G-~-------~~~~~~~~~l~~~G~iv~~ 260 (354)
T 2j8z_A 231 GVNLILDCIG-G-------SYWEKNVNCLALDGRWVLY 260 (354)
T ss_dssp CEEEEEESSC-G-------GGHHHHHHHEEEEEEEEEC
T ss_pred CceEEEECCC-c-------hHHHHHHHhccCCCEEEEE
Confidence 6999998654 1 2477889999999998775
No 384
>2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens}
Probab=63.19 E-value=5.2 Score=40.45 Aligned_cols=84 Identities=10% Similarity=0.022 Sum_probs=49.7
Q ss_pred CCCCCeEEEEc-CCC-CHhHHHHHh-cCCCcEEEEecCCCC---------CcEEeccCCCC--CC-CCCceeEEEEcCce
Q 010086 114 LSQSAKSLCVE-TQY-GQDVFALKE-IGVEDSIGIFKKSSK---------PLVISGEGHRI--PF-DGNTFDFVFVGGAR 178 (518)
Q Consensus 114 l~~~~rvLDVG-cGt-G~~~~~L~~-~g~~~v~gID~s~~~---------~l~~~~da~~L--Pf-~D~SFD~V~s~~~~ 178 (518)
+++|.+||-.| +|. |..+..+++ .| .+|++++ ++.. ..++..+..++ .. ....+|+|+....
T Consensus 181 ~~~g~~VlV~Ga~G~vG~~~~qla~~~G-a~Vi~~~-~~~~~~~~~~lGa~~v~~~~~~~~~~~~~~~~g~D~vid~~g- 257 (375)
T 2vn8_A 181 NCTGKRVLILGASGGVGTFAIQVMKAWD-AHVTAVC-SQDASELVRKLGADDVIDYKSGSVEEQLKSLKPFDFILDNVG- 257 (375)
T ss_dssp TCTTCEEEEETTTSHHHHHHHHHHHHTT-CEEEEEE-CGGGHHHHHHTTCSEEEETTSSCHHHHHHTSCCBSEEEESSC-
T ss_pred cCCCCEEEEECCCCHHHHHHHHHHHhCC-CEEEEEe-ChHHHHHHHHcCCCEEEECCchHHHHHHhhcCCCCEEEECCC-
Confidence 78899999999 454 666654444 67 5899888 3211 01111110000 00 0135899987653
Q ss_pred eeccCChHHHHHHHHhcccCCcEEEEE
Q 010086 179 LEKASKPLDFASEIVRTLKPEGFAVVH 205 (518)
Q Consensus 179 l~~~~dp~~~l~Ei~RVLKPGG~lvi~ 205 (518)
.+...+.+..+.|+|||.++..
T Consensus 258 -----~~~~~~~~~~~~l~~~G~iv~~ 279 (375)
T 2vn8_A 258 -----GSTETWAPDFLKKWSGATYVTL 279 (375)
T ss_dssp -----TTHHHHGGGGBCSSSCCEEEES
T ss_pred -----ChhhhhHHHHHhhcCCcEEEEe
Confidence 1223457788999999998764
No 385
>3g7u_A Cytosine-specific methyltransferase; DNA-binding, NAD-binding, structural GENO protein structure initiative, PSI; 1.75A {Escherichia coli O157}
Probab=62.09 E-value=7.9 Score=39.82 Aligned_cols=58 Identities=9% Similarity=0.076 Sum_probs=44.2
Q ss_pred CeEEEEcCCCCHhHHHHHhcCCCcEEEEecCCC---------C-CcEEeccCCCCCC--------CCCceeEEEEc
Q 010086 118 AKSLCVETQYGQDVFALKEIGVEDSIGIFKKSS---------K-PLVISGEGHRIPF--------DGNTFDFVFVG 175 (518)
Q Consensus 118 ~rvLDVGcGtG~~~~~L~~~g~~~v~gID~s~~---------~-~l~~~~da~~LPf--------~D~SFD~V~s~ 175 (518)
.+++|+-||.|.+...+.+.|+..+.++|+++. + ..++.+|..++.. ....+|+|+..
T Consensus 3 ~~vidLFsG~GGlslG~~~aG~~~v~avE~d~~a~~t~~~N~~~~~~~~~DI~~~~~~~~~~~~~~~~~~D~i~gg 78 (376)
T 3g7u_A 3 LNVIDLFSGVGGLSLGAARAGFDVKMAVEIDQHAINTHAINFPRSLHVQEDVSLLNAEIIKGFFKNDMPIDGIIGG 78 (376)
T ss_dssp CEEEEETCTTSHHHHHHHHHTCEEEEEECSCHHHHHHHHHHCTTSEEECCCGGGCCHHHHHHHHCSCCCCCEEEEC
T ss_pred CeEEEEccCcCHHHHHHHHCCCcEEEEEeCCHHHHHHHHHhCCCCceEecChhhcCHHHHHhhcccCCCeeEEEec
Confidence 489999999999999999889777889998741 2 2345677776632 34679999954
No 386
>1zsy_A Mitochondrial 2-enoyl thioester reductase; medium-chain dehydrogenase/reductase, oxidoreductase, 2-ENOY thioester reductase; 1.75A {Homo sapiens} PDB: 2vcy_A
Probab=61.57 E-value=44 Score=33.22 Aligned_cols=92 Identities=17% Similarity=0.205 Sum_probs=51.6
Q ss_pred HHHHHHcCCCCCCCeEEEEcC-CC-CHhHHHHHh-cCCCcEEEE-ecCCC------------CCcEEecc---CCCC-CC
Q 010086 105 FQDLISEGYLSQSAKSLCVET-QY-GQDVFALKE-IGVEDSIGI-FKKSS------------KPLVISGE---GHRI-PF 164 (518)
Q Consensus 105 ~~~L~~~gll~~~~rvLDVGc-Gt-G~~~~~L~~-~g~~~v~gI-D~s~~------------~~l~~~~d---a~~L-Pf 164 (518)
++-|...+-+++|.+||-+|+ |. |..+..+++ .| .+++++ +..+. ...++..+ ...+ ..
T Consensus 156 ~~~l~~~~~~~~g~~VlV~Ga~G~vG~~aiqlak~~G-a~vi~~~~~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~~~ 234 (357)
T 1zsy_A 156 YRMLMDFEQLQPGDSVIQNASNSGVGQAVIQIAAALG-LRTINVVRDRPDIQKLSDRLKSLGAEHVITEEELRRPEMKNF 234 (357)
T ss_dssp HHHHHHSSCCCTTCEEEESSTTSHHHHHHHHHHHHHT-CEEEEEECCCSCHHHHHHHHHHTTCSEEEEHHHHHSGGGGGT
T ss_pred HHHHHHHhccCCCCEEEEeCCcCHHHHHHHHHHHHcC-CEEEEEecCccchHHHHHHHHhcCCcEEEecCcchHHHHHHH
Confidence 344545566889999999998 43 666655554 57 455544 33221 01111110 1111 11
Q ss_pred CCC--ceeEEEEcCceeeccCChHHHHHHHHhcccCCcEEEEE
Q 010086 165 DGN--TFDFVFVGGARLEKASKPLDFASEIVRTLKPEGFAVVH 205 (518)
Q Consensus 165 ~D~--SFD~V~s~~~~l~~~~dp~~~l~Ei~RVLKPGG~lvi~ 205 (518)
-++ .+|+|+.... .....+..+.|+|||.++..
T Consensus 235 ~~~~~~~Dvvid~~g--------~~~~~~~~~~l~~~G~iv~~ 269 (357)
T 1zsy_A 235 FKDMPQPRLALNCVG--------GKSSTELLRQLARGGTMVTY 269 (357)
T ss_dssp TSSSCCCSEEEESSC--------HHHHHHHHTTSCTTCEEEEC
T ss_pred HhCCCCceEEEECCC--------cHHHHHHHHhhCCCCEEEEE
Confidence 111 4899987643 11235688999999998774
No 387
>4hg2_A Methyltransferase type 11; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MES; 1.60A {Anaeromyxobacter dehalogenans}
Probab=61.13 E-value=10 Score=36.61 Aligned_cols=48 Identities=15% Similarity=0.077 Sum_probs=35.1
Q ss_pred eEEEEeCCCCCCcchhhhhhhhCCCCCcceEEEEEcCCccchHhhccCCceEEEee
Q 010086 320 YVYVDVGARSYGSSIGSWFKKQYPKQNKTFDVYAIEADKTFHEEYKVKKKVKLLPY 375 (518)
Q Consensus 320 ~V~iD~GAn~~g~sv~~~F~~~YP~~~~~f~V~afE~np~~~~~~~~~~~V~~~~~ 375 (518)
.-++|+|++. |. .+..+.+.+ .+|+++|+++...+.-...++|+++..
T Consensus 41 ~~vLDvGcGt-G~-~~~~l~~~~------~~v~gvD~s~~ml~~a~~~~~v~~~~~ 88 (257)
T 4hg2_A 41 GDALDCGCGS-GQ-ASLGLAEFF------ERVHAVDPGEAQIRQALRHPRVTYAVA 88 (257)
T ss_dssp SEEEEESCTT-TT-THHHHHTTC------SEEEEEESCHHHHHTCCCCTTEEEEEC
T ss_pred CCEEEEcCCC-CH-HHHHHHHhC------CEEEEEeCcHHhhhhhhhcCCceeehh
Confidence 3578999994 85 445666544 279999999987666666788887764
No 388
>3tqs_A Ribosomal RNA small subunit methyltransferase A; protein synthesis; 1.98A {Coxiella burnetii} SCOP: c.66.1.0
Probab=60.98 E-value=7.9 Score=37.52 Aligned_cols=52 Identities=12% Similarity=0.250 Sum_probs=37.1
Q ss_pred cCCceEEEEeCCCCCCcchhhhhhhhCCCCCcceEEEEEcCCccchHhh----ccCCceEEEee
Q 010086 316 FKNRYVYVDVGARSYGSSIGSWFKKQYPKQNKTFDVYAIEADKTFHEEY----KVKKKVKLLPY 375 (518)
Q Consensus 316 ~~~r~V~iD~GAn~~g~sv~~~F~~~YP~~~~~f~V~afE~np~~~~~~----~~~~~V~~~~~ 375 (518)
..++..++|+|+| .|. ++..+.+.. .+|+++|.|+.+.+.. ...++++++..
T Consensus 27 ~~~~~~VLEIG~G-~G~-lt~~La~~~------~~V~avEid~~~~~~~~~~~~~~~~v~~i~~ 82 (255)
T 3tqs_A 27 PQKTDTLVEIGPG-RGA-LTDYLLTEC------DNLALVEIDRDLVAFLQKKYNQQKNITIYQN 82 (255)
T ss_dssp CCTTCEEEEECCT-TTT-THHHHTTTS------SEEEEEECCHHHHHHHHHHHTTCTTEEEEES
T ss_pred CCCcCEEEEEccc-ccH-HHHHHHHhC------CEEEEEECCHHHHHHHHHHHhhCCCcEEEEc
Confidence 4567889999999 585 655666543 2899999999876543 33467887765
No 389
>3eey_A Putative rRNA methylase; rRNA methylation, S-adenosyl-methionine, structural genomics structure initiative, PSI; HET: SAM; 2.20A {Clostridium thermocellum atcc 27405}
Probab=60.61 E-value=6.7 Score=35.18 Aligned_cols=55 Identities=13% Similarity=0.149 Sum_probs=37.3
Q ss_pred ccCCceEEEEeCCCCCCcchhhhhhhhC-CCCCcceEEEEEcCCccchHh----hcc---CCceEEEee
Q 010086 315 SFKNRYVYVDVGARSYGSSIGSWFKKQY-PKQNKTFDVYAIEADKTFHEE----YKV---KKKVKLLPY 375 (518)
Q Consensus 315 s~~~r~V~iD~GAn~~g~sv~~~F~~~Y-P~~~~~f~V~afE~np~~~~~----~~~---~~~V~~~~~ 375 (518)
.++++..++|+|++. |. ++..+.+.+ |.. +|+++|.+|...+. +.. .++++++..
T Consensus 19 ~~~~~~~vLDlGcG~-G~-~~~~l~~~~~~~~----~v~~vD~s~~~~~~a~~~~~~~~~~~~v~~~~~ 81 (197)
T 3eey_A 19 FVKEGDTVVDATCGN-GN-DTAFLASLVGENG----RVFGFDIQDKAIANTTKKLTDLNLIDRVTLIKD 81 (197)
T ss_dssp HCCTTCEEEESCCTT-SH-HHHHHHHHHCTTC----EEEEECSCHHHHHHHHHHHHHTTCGGGEEEECS
T ss_pred cCCCCCEEEEcCCCC-CH-HHHHHHHHhCCCC----EEEEEECCHHHHHHHHHHHHHcCCCCCeEEEEC
Confidence 356778999999994 75 546677665 433 79999999986442 221 256776664
No 390
>3hm2_A Precorrin-6Y C5,15-methyltransferase; alpha-beta-sandwich, structural genomics, PSI-2, protein structure initiative; 2.21A {Corynebacterium diphtheriae}
Probab=60.42 E-value=6.8 Score=34.22 Aligned_cols=41 Identities=24% Similarity=0.265 Sum_probs=31.5
Q ss_pred cCCceEEEEeCCCCCCcchhhhhhhhCCCCCcceEEEEEcCCccchH
Q 010086 316 FKNRYVYVDVGARSYGSSIGSWFKKQYPKQNKTFDVYAIEADKTFHE 362 (518)
Q Consensus 316 ~~~r~V~iD~GAn~~g~sv~~~F~~~YP~~~~~f~V~afE~np~~~~ 362 (518)
.+++..++|+|++. |. ++..+.+.+|. .+|+++|.+|...+
T Consensus 23 ~~~~~~vldiG~G~-G~-~~~~l~~~~~~----~~v~~vD~~~~~~~ 63 (178)
T 3hm2_A 23 PKPHETLWDIGGGS-GS-IAIEWLRSTPQ----TTAVCFEISEERRE 63 (178)
T ss_dssp CCTTEEEEEESTTT-TH-HHHHHHTTSSS----EEEEEECSCHHHHH
T ss_pred ccCCCeEEEeCCCC-CH-HHHHHHHHCCC----CeEEEEeCCHHHHH
Confidence 46788999999994 75 54677777763 48999999997543
No 391
>3a27_A TYW2, uncharacterized protein MJ1557; wybutosine modification, transferase; HET: SAM; 2.00A {Methanocaldococcus jannaschii}
Probab=60.36 E-value=11 Score=36.35 Aligned_cols=54 Identities=24% Similarity=0.084 Sum_probs=36.7
Q ss_pred cCCceEEEEeCCCCCCcchhhhhhhhCCCCCcceEEEEEcCCccchHhh------ccCCceEEEee
Q 010086 316 FKNRYVYVDVGARSYGSSIGSWFKKQYPKQNKTFDVYAIEADKTFHEEY------KVKKKVKLLPY 375 (518)
Q Consensus 316 ~~~r~V~iD~GAn~~g~sv~~~F~~~YP~~~~~f~V~afE~np~~~~~~------~~~~~V~~~~~ 375 (518)
++++..++|+|++ .|. ++..+.+..+.. +|+++|.||...+.. ++.++++++..
T Consensus 117 ~~~~~~VLDlgcG-~G~-~s~~la~~~~~~----~V~~vD~s~~av~~a~~n~~~n~l~~~~~~~~ 176 (272)
T 3a27_A 117 SNENEVVVDMFAG-IGY-FTIPLAKYSKPK----LVYAIEKNPTAYHYLCENIKLNKLNNVIPILA 176 (272)
T ss_dssp CCTTCEEEETTCT-TTT-THHHHHHHTCCS----EEEEEECCHHHHHHHHHHHHHTTCSSEEEEES
T ss_pred cCCCCEEEEecCc-CCH-HHHHHHHhCCCC----EEEEEeCCHHHHHHHHHHHHHcCCCCEEEEEC
Confidence 3467789999999 475 556677766632 799999999864422 23356665553
No 392
>2plw_A Ribosomal RNA methyltransferase, putative; malaria, SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Plasmodium falciparum}
Probab=60.19 E-value=8 Score=34.69 Aligned_cols=50 Identities=14% Similarity=0.165 Sum_probs=34.7
Q ss_pred cCCceEEEEeCCCCCCcchhhhhhhhCCCCCcceEEEEEcCCccchHhhccCCceEEEe
Q 010086 316 FKNRYVYVDVGARSYGSSIGSWFKKQYPKQNKTFDVYAIEADKTFHEEYKVKKKVKLLP 374 (518)
Q Consensus 316 ~~~r~V~iD~GAn~~g~sv~~~F~~~YP~~~~~f~V~afE~np~~~~~~~~~~~V~~~~ 374 (518)
+++...++|+|++. |. ++..+.+.+|. ...+|+++|.+|.. ..++|+++.
T Consensus 20 ~~~~~~vLDlGcG~-G~-~~~~l~~~~~~--~~~~v~gvD~s~~~-----~~~~v~~~~ 69 (201)
T 2plw_A 20 LKKNKIILDIGCYP-GS-WCQVILERTKN--YKNKIIGIDKKIMD-----PIPNVYFIQ 69 (201)
T ss_dssp CCTTEEEEEESCTT-CH-HHHHHHHHTTT--SCEEEEEEESSCCC-----CCTTCEEEE
T ss_pred CCCCCEEEEeCCCC-CH-HHHHHHHHcCC--CCceEEEEeCCccC-----CCCCceEEE
Confidence 35677899999994 74 66788888873 12389999999852 234555544
No 393
>4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A
Probab=59.51 E-value=24 Score=36.39 Aligned_cols=85 Identities=19% Similarity=0.109 Sum_probs=52.2
Q ss_pred CCCCCCCeEEEEcC-CC-CHhHHHHHh-cCCCcEEEEecCCCC---------CcEEeccCCCCCC---------------
Q 010086 112 GYLSQSAKSLCVET-QY-GQDVFALKE-IGVEDSIGIFKKSSK---------PLVISGEGHRIPF--------------- 164 (518)
Q Consensus 112 gll~~~~rvLDVGc-Gt-G~~~~~L~~-~g~~~v~gID~s~~~---------~l~~~~da~~LPf--------------- 164 (518)
.-+++|.+||-.|+ |. |..+..+++ .| .++++++.++.. ..++.....+...
T Consensus 216 ~~~~~g~~VlV~GasG~iG~~a~qla~~~G-a~vi~~~~~~~~~~~~~~lGa~~~i~~~~~~~~~~~~~~~~~~~~~~~~ 294 (447)
T 4a0s_A 216 AQMKQGDIVLIWGASGGLGSYAIQFVKNGG-GIPVAVVSSAQKEAAVRALGCDLVINRAELGITDDIADDPRRVVETGRK 294 (447)
T ss_dssp TCCCTTCEEEETTTTSHHHHHHHHHHHHTT-CEEEEEESSHHHHHHHHHTTCCCEEEHHHHTCCTTGGGCHHHHHHHHHH
T ss_pred cCCCCCCEEEEECCCCHHHHHHHHHHHHcC-CEEEEEeCCHHHHHHHHhcCCCEEEecccccccccccccccccchhhhH
Confidence 55789999999998 43 666555544 56 588888865310 1111111001000
Q ss_pred --------CCCceeEEEEcCceeeccCChHHHHHHHHhcccCCcEEEEE
Q 010086 165 --------DGNTFDFVFVGGARLEKASKPLDFASEIVRTLKPEGFAVVH 205 (518)
Q Consensus 165 --------~D~SFD~V~s~~~~l~~~~dp~~~l~Ei~RVLKPGG~lvi~ 205 (518)
....+|+|+.... ...+++..+.|+|||.+++.
T Consensus 295 ~~~~v~~~~g~g~Dvvid~~G--------~~~~~~~~~~l~~~G~iv~~ 335 (447)
T 4a0s_A 295 LAKLVVEKAGREPDIVFEHTG--------RVTFGLSVIVARRGGTVVTC 335 (447)
T ss_dssp HHHHHHHHHSSCCSEEEECSC--------HHHHHHHHHHSCTTCEEEES
T ss_pred HHHHHHHHhCCCceEEEECCC--------chHHHHHHHHHhcCCEEEEE
Confidence 0235899987654 13577888999999998875
No 394
>1m6y_A S-adenosyl-methyltransferase MRAW; SAM-dependent methyltransferase fold, protein-cofactor product complex, structural genomics, PSI; HET: SAH; 1.90A {Thermotoga maritima} SCOP: a.60.13.1 c.66.1.23 PDB: 1n2x_A*
Probab=58.82 E-value=8.6 Score=38.32 Aligned_cols=55 Identities=15% Similarity=0.184 Sum_probs=39.2
Q ss_pred cCCceEEEEeCCCCCCcchhhhhhhhCCCCCcceEEEEEcCCccchHh----hccC-CceEEEeec
Q 010086 316 FKNRYVYVDVGARSYGSSIGSWFKKQYPKQNKTFDVYAIEADKTFHEE----YKVK-KKVKLLPYA 376 (518)
Q Consensus 316 ~~~r~V~iD~GAn~~g~sv~~~F~~~YP~~~~~f~V~afE~np~~~~~----~~~~-~~V~~~~~A 376 (518)
.+++..++|+|++ .|. .+..+.+.+|. .+|+++|.||...+. .... .+|+++...
T Consensus 24 ~~~g~~vLD~g~G-~G~-~s~~la~~~~~----~~VigvD~d~~al~~A~~~~~~~g~~v~~v~~d 83 (301)
T 1m6y_A 24 PEDEKIILDCTVG-EGG-HSRAILEHCPG----CRIIGIDVDSEVLRIAEEKLKEFSDRVSLFKVS 83 (301)
T ss_dssp CCTTCEEEETTCT-TSH-HHHHHHHHCTT----CEEEEEESCHHHHHHHHHHTGGGTTTEEEEECC
T ss_pred CCCCCEEEEEeCC-cCH-HHHHHHHHCCC----CEEEEEECCHHHHHHHHHHHHhcCCcEEEEECC
Confidence 4577899999999 474 55678888873 389999999986432 2221 678887753
No 395
>3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans}
Probab=58.67 E-value=5.4 Score=39.87 Aligned_cols=88 Identities=15% Similarity=0.143 Sum_probs=53.8
Q ss_pred HHHHcCCCCCCCeEEEEcC-CC-CHhHHHHHh-cCCCcEEEEecCCCC--------CcEEeccCCCCC------CCCCce
Q 010086 107 DLISEGYLSQSAKSLCVET-QY-GQDVFALKE-IGVEDSIGIFKKSSK--------PLVISGEGHRIP------FDGNTF 169 (518)
Q Consensus 107 ~L~~~gll~~~~rvLDVGc-Gt-G~~~~~L~~-~g~~~v~gID~s~~~--------~l~~~~da~~LP------f~D~SF 169 (518)
-|.+..-+++|.+||-+|+ |. |..+..+++ .| .+|+++ .++.. ...+. +..++. .....+
T Consensus 141 ~l~~~~~~~~g~~VlV~Ga~g~iG~~~~q~a~~~G-a~Vi~~-~~~~~~~~~~~lGa~~i~-~~~~~~~~~~~~~~~~g~ 217 (343)
T 3gaz_A 141 GLVDRAQVQDGQTVLIQGGGGGVGHVAIQIALARG-ARVFAT-ARGSDLEYVRDLGATPID-ASREPEDYAAEHTAGQGF 217 (343)
T ss_dssp HHTTTTCCCTTCEEEEETTTSHHHHHHHHHHHHTT-CEEEEE-ECHHHHHHHHHHTSEEEE-TTSCHHHHHHHHHTTSCE
T ss_pred HHHHhcCCCCCCEEEEecCCCHHHHHHHHHHHHCC-CEEEEE-eCHHHHHHHHHcCCCEec-cCCCHHHHHHHHhcCCCc
Confidence 3445567889999999994 43 666644444 57 488888 44210 00111 111100 012469
Q ss_pred eEEEEcCceeeccCChHHHHHHHHhcccCCcEEEEE
Q 010086 170 DFVFVGGARLEKASKPLDFASEIVRTLKPEGFAVVH 205 (518)
Q Consensus 170 D~V~s~~~~l~~~~dp~~~l~Ei~RVLKPGG~lvi~ 205 (518)
|+|+.... ...+.+..+.|+|||.++..
T Consensus 218 D~vid~~g--------~~~~~~~~~~l~~~G~iv~~ 245 (343)
T 3gaz_A 218 DLVYDTLG--------GPVLDASFSAVKRFGHVVSC 245 (343)
T ss_dssp EEEEESSC--------THHHHHHHHHEEEEEEEEES
T ss_pred eEEEECCC--------cHHHHHHHHHHhcCCeEEEE
Confidence 99987653 14678889999999998875
No 396
>3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH, oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora spinosa}
Probab=58.62 E-value=4.4 Score=45.85 Aligned_cols=87 Identities=18% Similarity=0.155 Sum_probs=53.9
Q ss_pred HcCCCCCCCeEEEEcC-CC-CHhHHHHHh-cCCCcEEEEecCCCCCcEEe-----ccCCCCCC--------CCCceeEEE
Q 010086 110 SEGYLSQSAKSLCVET-QY-GQDVFALKE-IGVEDSIGIFKKSSKPLVIS-----GEGHRIPF--------DGNTFDFVF 173 (518)
Q Consensus 110 ~~gll~~~~rvLDVGc-Gt-G~~~~~L~~-~g~~~v~gID~s~~~~l~~~-----~da~~LPf--------~D~SFD~V~ 173 (518)
+.+-+++|.+||-.|+ |. |..+..+++ .| .+|++++.++....... .+.....| ...-+|+|+
T Consensus 339 ~~a~l~~G~~VLI~gaaGgvG~~aiqlAk~~G-a~V~~t~~~~k~~~l~lga~~v~~~~~~~~~~~i~~~t~g~GvDvVl 417 (795)
T 3slk_A 339 DLAGLRPGESLLVHSAAGGVGMAAIQLARHLG-AEVYATASEDKWQAVELSREHLASSRTCDFEQQFLGATGGRGVDVVL 417 (795)
T ss_dssp CCTCCCTTCCEEEESTTBHHHHHHHHHHHHTT-CCEEEECCGGGGGGSCSCGGGEECSSSSTHHHHHHHHSCSSCCSEEE
T ss_pred HHhCCCCCCEEEEecCCCHHHHHHHHHHHHcC-CEEEEEeChHHhhhhhcChhheeecCChhHHHHHHHHcCCCCeEEEE
Confidence 4456789999999995 43 777766665 56 58999885431110000 11111122 123589999
Q ss_pred EcCceeeccCChHHHHHHHHhcccCCcEEEEE
Q 010086 174 VGGARLEKASKPLDFASEIVRTLKPEGFAVVH 205 (518)
Q Consensus 174 s~~~~l~~~~dp~~~l~Ei~RVLKPGG~lvi~ 205 (518)
.+.. ...+.+..+.|+|||+++..
T Consensus 418 d~~g--------g~~~~~~l~~l~~~Gr~v~i 441 (795)
T 3slk_A 418 NSLA--------GEFADASLRMLPRGGRFLEL 441 (795)
T ss_dssp ECCC--------TTTTHHHHTSCTTCEEEEEC
T ss_pred ECCC--------cHHHHHHHHHhcCCCEEEEe
Confidence 7543 12467889999999998774
No 397
>4gua_A Non-structural polyprotein; viral precursor polyprotein, protease, zinc-binding, hydrola; HET: MES; 2.85A {Sindbis virus}
Probab=58.60 E-value=12 Score=40.91 Aligned_cols=70 Identities=20% Similarity=0.228 Sum_probs=45.8
Q ss_pred CCCCCCceeEEEEcCc---eeeccC---Ch----HHHHHHHHhcccCCcEEEEE-ecCCCccCchhHhhhccCccEEEEe
Q 010086 162 IPFDGNTFDFVFVGGA---RLEKAS---KP----LDFASEIVRTLKPEGFAVVH-VRAKDEYSFNSFLDLFNSCKLVKSR 230 (518)
Q Consensus 162 LPf~D~SFD~V~s~~~---~l~~~~---dp----~~~l~Ei~RVLKPGG~lvi~-~~~~~~~s~~~~~~lf~~~~~v~~~ 230 (518)
+| +++.||+||..-. ..||.. |- ...-....+.|||||.+++. -+..|-.|.+-+..+-+.|+-+++-
T Consensus 216 ~p-~~~ryDlvfvn~~t~yr~HHyqQCeDHa~~l~ml~~~al~~l~pGGt~v~~~YGyADr~sE~vv~alaRkF~~~rv~ 294 (670)
T 4gua_A 216 FP-PQARYDLVFINIGTKYRNHHFQQCEDHAATLKTLSRSALNCLNPGGTLVVKSYGYADRNSEDVVTALARKFVRVSAA 294 (670)
T ss_dssp CC-CCCCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHTEEEEEEEEEEESCCCSHHHHHHHHHHHHTEEEEEEE
T ss_pred CC-CCCcccEEEEecCCCcccchHHHHHHHHHHHHHHhHHHHhhcCCCceEEEEEeeccccchHHHHHHHHhheeeeeee
Confidence 45 4689999998652 246653 21 12347788999999998775 5666655545555665666666655
Q ss_pred cc
Q 010086 231 DI 232 (518)
Q Consensus 231 ~v 232 (518)
+.
T Consensus 295 ~p 296 (670)
T 4gua_A 295 RP 296 (670)
T ss_dssp CC
T ss_pred CC
Confidence 54
No 398
>1qam_A ERMC' methyltransferase; rRNA methyltransferase ERMC', cofactor analogs; 2.20A {Bacillus subtilis} SCOP: c.66.1.24 PDB: 1qan_A* 1qao_A* 1qaq_A* 2erc_A
Probab=58.56 E-value=11 Score=35.88 Aligned_cols=52 Identities=15% Similarity=0.142 Sum_probs=36.7
Q ss_pred cCCceEEEEeCCCCCCcchhhhhhhhCCCCCcceEEEEEcCCccchHhh----ccCCceEEEee
Q 010086 316 FKNRYVYVDVGARSYGSSIGSWFKKQYPKQNKTFDVYAIEADKTFHEEY----KVKKKVKLLPY 375 (518)
Q Consensus 316 ~~~r~V~iD~GAn~~g~sv~~~F~~~YP~~~~~f~V~afE~np~~~~~~----~~~~~V~~~~~ 375 (518)
..++..++|+|+| .|. ++..+.+.. .+|+++|.|+...+.. ...++++++..
T Consensus 28 ~~~~~~VLDiG~G-~G~-lt~~l~~~~------~~v~~vD~~~~~~~~a~~~~~~~~~v~~~~~ 83 (244)
T 1qam_A 28 LNEHDNIFEIGSG-KGH-FTLELVQRC------NFVTAIEIDHKLCKTTENKLVDHDNFQVLNK 83 (244)
T ss_dssp CCTTCEEEEECCT-TSH-HHHHHHHHS------SEEEEECSCHHHHHHHHHHTTTCCSEEEECC
T ss_pred CCCCCEEEEEeCC-chH-HHHHHHHcC------CeEEEEECCHHHHHHHHHhhccCCCeEEEEC
Confidence 3567789999999 485 656666654 2799999999875433 23357777764
No 399
>1boo_A Protein (N-4 cytosine-specific methyltransferase PVU II); type II DNA-(cytosine N4) methyltransferase, amino methylation, selenomethionine; HET: SAH; 2.80A {Proteus vulgaris} SCOP: c.66.1.11
Probab=58.39 E-value=9 Score=38.29 Aligned_cols=45 Identities=7% Similarity=-0.124 Sum_probs=36.4
Q ss_pred HHHHHHHHcCCCCCCCeEEEEcCCCCHhHHHHHhcCCCcEEEEecCC
Q 010086 103 SVFQDLISEGYLSQSAKSLCVETQYGQDVFALKEIGVEDSIGIFKKS 149 (518)
Q Consensus 103 ~l~~~L~~~gll~~~~rvLDVGcGtG~~~~~L~~~g~~~v~gID~s~ 149 (518)
.+++.++... .++|+.|||--||+|..+.+..+.| .+.+|+|+.+
T Consensus 240 ~l~~~~i~~~-~~~~~~VlDpF~GsGtt~~aa~~~g-r~~ig~e~~~ 284 (323)
T 1boo_A 240 KLPEFFIRML-TEPDDLVVDIFGGSNTTGLVAERES-RKWISFEMKP 284 (323)
T ss_dssp HHHHHHHHHH-CCTTCEEEETTCTTCHHHHHHHHTT-CEEEEEESCH
T ss_pred HHHHHHHHHh-CCCCCEEEECCCCCCHHHHHHHHcC-CCEEEEeCCH
Confidence 5666666543 4789999999999999988877788 7999999864
No 400
>3ckk_A TRNA (guanine-N(7)-)-methyltransferase; mettl1, S-adenosyl-L-methionine, tRNA Pro structural genomics, structural genomics consortium, SGC; HET: SAM; 1.55A {Homo sapiens}
Probab=58.14 E-value=14 Score=34.97 Aligned_cols=129 Identities=14% Similarity=0.078 Sum_probs=68.8
Q ss_pred cCCceEEEEeCCCCCCcchhhhhhhhCCCCCcceEEEEEcCCccchHh-------h-----ccCCceEEEeecee-----
Q 010086 316 FKNRYVYVDVGARSYGSSIGSWFKKQYPKQNKTFDVYAIEADKTFHEE-------Y-----KVKKKVKLLPYAAW----- 378 (518)
Q Consensus 316 ~~~r~V~iD~GAn~~g~sv~~~F~~~YP~~~~~f~V~afE~np~~~~~-------~-----~~~~~V~~~~~Av~----- 378 (518)
..++..++|+|.| .|. ++..+.+.+|.. .|+++|.++...+. + ...+||+++..-+-
T Consensus 44 ~~~~~~vLDiGcG-~G~-~~~~la~~~p~~----~v~GiDis~~~l~~A~~~~~~l~~~~~~~~~nv~~~~~d~~~~l~~ 117 (235)
T 3ckk_A 44 AQAQVEFADIGCG-YGG-LLVELSPLFPDT----LILGLEIRVKVSDYVQDRIRALRAAPAGGFQNIACLRSNAMKHLPN 117 (235)
T ss_dssp --CCEEEEEETCT-TCH-HHHHHGGGSTTS----EEEEEESCHHHHHHHHHHHHHHHHSTTCCCTTEEEEECCTTTCHHH
T ss_pred cCCCCeEEEEccC-CcH-HHHHHHHHCCCC----eEEEEECCHHHHHHHHHHHHHHHHHHhcCCCeEEEEECcHHHhhhh
Confidence 3467889999999 486 436777788843 89999999975431 1 13467887765321
Q ss_pred -ecCCceEEEecCCCCcchhhcccCCccccccccCCCCCCCCCcceeecccHHHHHhhcCCCCCeEEEEeeccchhhhhH
Q 010086 379 -VRNETLSFQINHDPDKEVVVKGRGMGRIQPVQSLSDGGFDGEVDRIQGFDFADWLKNTVTDKDFVVMKMDVEGTEFDLI 457 (518)
Q Consensus 379 -~~~~tl~f~~~~~~~~~~~~~~~g~~~i~p~~~~~~~~~~g~~~~v~~vd~s~wl~~~v~~~D~VVlKMDIEGaE~~vL 457 (518)
..++++....-.-++ |.. +.. ... ..+..-.+.+-+...++++=.+++..|.+..-..++
T Consensus 118 ~~~~~~~D~v~~~~~d--------------p~~--k~~--h~k-rr~~~~~~l~~~~~~LkpGG~l~~~td~~~~~~~~~ 178 (235)
T 3ckk_A 118 FFYKGQLTKMFFLFPD--------------PHF--KRT--KHK-WRIISPTLLAEYAYVLRVGGLVYTITDVLELHDWMC 178 (235)
T ss_dssp HCCTTCEEEEEEESCC------------------------------CCCHHHHHHHHHHEEEEEEEEEEESCHHHHHHHH
T ss_pred hCCCcCeeEEEEeCCC--------------chh--hhh--hhh-hhhhhHHHHHHHHHHCCCCCEEEEEeCCHHHHHHHH
Confidence 112322211000000 000 000 000 001112344444555666677889999887556677
Q ss_pred HHHHhcCCcccc
Q 010086 458 PRLFETGAICLI 469 (518)
Q Consensus 458 ~~l~~~g~i~~I 469 (518)
+.|.+.+.+..+
T Consensus 179 ~~l~~~~~f~~~ 190 (235)
T 3ckk_A 179 THFEEHPLFERV 190 (235)
T ss_dssp HHHHTSTTEEEE
T ss_pred HHHHHCCCcccc
Confidence 777776654443
No 401
>2yxd_A Probable cobalt-precorrin-6Y C(15)-methyltransfer [decarboxylating]; alpha and beta protein (A/B) class; HET: MES; 2.30A {Methanocaldococcus jannaschii}
Probab=57.80 E-value=11 Score=32.78 Aligned_cols=51 Identities=27% Similarity=0.173 Sum_probs=33.2
Q ss_pred CCceEEEEeCCCCCCcchhhhhhhhCCCCCcceEEEEEcCCccchHhhc------cCCceEEEee
Q 010086 317 KNRYVYVDVGARSYGSSIGSWFKKQYPKQNKTFDVYAIEADKTFHEEYK------VKKKVKLLPY 375 (518)
Q Consensus 317 ~~r~V~iD~GAn~~g~sv~~~F~~~YP~~~~~f~V~afE~np~~~~~~~------~~~~V~~~~~ 375 (518)
.++..++|+|++ .|. ++..+.+ +. .+|+++|.+|...+... ..++++++..
T Consensus 34 ~~~~~vLdiG~G-~G~-~~~~l~~--~~----~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~ 90 (183)
T 2yxd_A 34 NKDDVVVDVGCG-SGG-MTVEIAK--RC----KFVYAIDYLDGAIEVTKQNLAKFNIKNCQIIKG 90 (183)
T ss_dssp CTTCEEEEESCC-CSH-HHHHHHT--TS----SEEEEEECSHHHHHHHHHHHHHTTCCSEEEEES
T ss_pred CCCCEEEEeCCC-CCH-HHHHHHh--cC----CeEEEEeCCHHHHHHHHHHHHHcCCCcEEEEEC
Confidence 456789999999 475 4345554 32 38999999998654322 2256666553
No 402
>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP}
Probab=57.00 E-value=5.6 Score=39.37 Aligned_cols=90 Identities=17% Similarity=0.145 Sum_probs=55.6
Q ss_pred HHHHHHcCCCCCCCeEEEEcC--CCCHhH-HHHHhcCCCcEEEEecCCCC---------CcEEeccCCCCC--------C
Q 010086 105 FQDLISEGYLSQSAKSLCVET--QYGQDV-FALKEIGVEDSIGIFKKSSK---------PLVISGEGHRIP--------F 164 (518)
Q Consensus 105 ~~~L~~~gll~~~~rvLDVGc--GtG~~~-~~L~~~g~~~v~gID~s~~~---------~l~~~~da~~LP--------f 164 (518)
++-|...+-++++.+||-.|+ |.|..+ +.++..| .+|+++|.++.. ...+ |..+-. .
T Consensus 134 ~~~l~~~~~~~~g~~vlV~Ga~ggiG~~~~~~a~~~G-~~Vi~~~~~~~~~~~~~~~g~~~~~--d~~~~~~~~~i~~~~ 210 (333)
T 1wly_A 134 QYLLHQTHKVKPGDYVLIHAAAGGMGHIMVPWARHLG-ATVIGTVSTEEKAETARKLGCHHTI--NYSTQDFAEVVREIT 210 (333)
T ss_dssp HHHHHTTSCCCTTCEEEETTTTSTTHHHHHHHHHHTT-CEEEEEESSHHHHHHHHHHTCSEEE--ETTTSCHHHHHHHHH
T ss_pred HHHHHHhhCCCCCCEEEEECCccHHHHHHHHHHHHCC-CEEEEEeCCHHHHHHHHHcCCCEEE--ECCCHHHHHHHHHHh
Confidence 344444556789999999996 336655 3444567 589999976410 1111 111100 0
Q ss_pred CCCceeEEEEcCceeeccCChHHHHHHHHhcccCCcEEEEE
Q 010086 165 DGNTFDFVFVGGARLEKASKPLDFASEIVRTLKPEGFAVVH 205 (518)
Q Consensus 165 ~D~SFD~V~s~~~~l~~~~dp~~~l~Ei~RVLKPGG~lvi~ 205 (518)
....+|+|+.... - ..++++.+.|+|||.++..
T Consensus 211 ~~~~~d~vi~~~g-~-------~~~~~~~~~l~~~G~iv~~ 243 (333)
T 1wly_A 211 GGKGVDVVYDSIG-K-------DTLQKSLDCLRPRGMCAAY 243 (333)
T ss_dssp TTCCEEEEEECSC-T-------TTHHHHHHTEEEEEEEEEC
T ss_pred CCCCCeEEEECCc-H-------HHHHHHHHhhccCCEEEEE
Confidence 1235999998654 1 3477889999999988764
No 403
>2vdv_E TRNA (guanine-N(7)-)-methyltransferase; S-adenosyl-L-methionine, phosphorylation, M7G, spout MT, tRNA processing; HET: SAM; 2.30A {Saccharomyces cerevisiae} PDB: 2vdu_E
Probab=56.70 E-value=16 Score=34.34 Aligned_cols=40 Identities=13% Similarity=0.340 Sum_probs=31.0
Q ss_pred cCCceEEEEeCCCCCCcchhhhhhhhCCCCCcceEEEEEcCCccch
Q 010086 316 FKNRYVYVDVGARSYGSSIGSWFKKQYPKQNKTFDVYAIEADKTFH 361 (518)
Q Consensus 316 ~~~r~V~iD~GAn~~g~sv~~~F~~~YP~~~~~f~V~afE~np~~~ 361 (518)
++++..++|+|++ .|. .+..+.+.+|.. +|+++|.++...
T Consensus 47 ~~~~~~vLDiGcG-~G~-~~~~la~~~~~~----~v~gvD~s~~~l 86 (246)
T 2vdv_E 47 MTKKVTIADIGCG-FGG-LMIDLSPAFPED----LILGMEIRVQVT 86 (246)
T ss_dssp BSCCEEEEEETCT-TSH-HHHHHHHHSTTS----EEEEEESCHHHH
T ss_pred CCCCCEEEEEcCC-CCH-HHHHHHHhCCCC----CEEEEEcCHHHH
Confidence 4578899999999 475 446777778743 899999999754
No 404
>3dtn_A Putative methyltransferase MM_2633; structural genomics, unknown function, PSI-2, protein structure initiative; 2.09A {Methanosarcina mazei}
Probab=56.59 E-value=16 Score=33.56 Aligned_cols=54 Identities=19% Similarity=0.323 Sum_probs=38.3
Q ss_pred cCCceEEEEeCCCCCCcchhhhhhhhCCCCCcceEEEEEcCCccchHh----hccCCceEEEee
Q 010086 316 FKNRYVYVDVGARSYGSSIGSWFKKQYPKQNKTFDVYAIEADKTFHEE----YKVKKKVKLLPY 375 (518)
Q Consensus 316 ~~~r~V~iD~GAn~~g~sv~~~F~~~YP~~~~~f~V~afE~np~~~~~----~~~~~~V~~~~~ 375 (518)
.+++.-++|+|++ .|. ++..+.+.+|. .+|+++|.+|...+. +...++|+++..
T Consensus 42 ~~~~~~vLDiG~G-~G~-~~~~l~~~~~~----~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~ 99 (234)
T 3dtn_A 42 DTENPDILDLGAG-TGL-LSAFLMEKYPE----ATFTLVDMSEKMLEIAKNRFRGNLKVKYIEA 99 (234)
T ss_dssp SCSSCEEEEETCT-TSH-HHHHHHHHCTT----CEEEEEESCHHHHHHHHHHTCSCTTEEEEES
T ss_pred CCCCCeEEEecCC-CCH-HHHHHHHhCCC----CeEEEEECCHHHHHHHHHhhccCCCEEEEeC
Confidence 3456789999999 485 55778888874 389999999986543 333346766654
No 405
>3gru_A Dimethyladenosine transferase; rossman fold, ribosomal assem adenosyl-L-methionine, rRNA, methyltransferase, RNA-binding processing; HET: AMP; 1.60A {Methanocaldococcus jannaschii} PDB: 3grr_A* 3grv_A* 3gry_A* 3fyd_A 3fyc_A*
Probab=56.18 E-value=15 Score=36.48 Aligned_cols=52 Identities=19% Similarity=0.293 Sum_probs=37.6
Q ss_pred cCCceEEEEeCCCCCCcchhhhhhhhCCCCCcceEEEEEcCCccchHh----hccCCceEEEee
Q 010086 316 FKNRYVYVDVGARSYGSSIGSWFKKQYPKQNKTFDVYAIEADKTFHEE----YKVKKKVKLLPY 375 (518)
Q Consensus 316 ~~~r~V~iD~GAn~~g~sv~~~F~~~YP~~~~~f~V~afE~np~~~~~----~~~~~~V~~~~~ 375 (518)
.+++..++|+|+| .|. ++..+.+. . .+|+++|.|+.+.+. +...++|+++..
T Consensus 48 ~~~~~~VLEIG~G-~G~-lT~~La~~-~-----~~V~aVEid~~li~~a~~~~~~~~~v~vi~g 103 (295)
T 3gru_A 48 LTKDDVVLEIGLG-KGI-LTEELAKN-A-----KKVYVIEIDKSLEPYANKLKELYNNIEIIWG 103 (295)
T ss_dssp CCTTCEEEEECCT-TSH-HHHHHHHH-S-----SEEEEEESCGGGHHHHHHHHHHCSSEEEEES
T ss_pred CCCcCEEEEECCC-chH-HHHHHHhc-C-----CEEEEEECCHHHHHHHHHHhccCCCeEEEEC
Confidence 3567789999999 585 65666654 2 279999999997654 334578888775
No 406
>1i4w_A Mitochondrial replication protein MTF1; mitochondrial transcription factor, transcription initiation; 2.60A {Saccharomyces cerevisiae} SCOP: c.66.1.24
Probab=56.17 E-value=10 Score=38.85 Aligned_cols=53 Identities=13% Similarity=0.222 Sum_probs=39.9
Q ss_pred CceEEEEeCCCCCCcchhhhhhhhC-CCCCcceEEEEEcCCccchHhhc---cCCceEEEeece
Q 010086 318 NRYVYVDVGARSYGSSIGSWFKKQY-PKQNKTFDVYAIEADKTFHEEYK---VKKKVKLLPYAA 377 (518)
Q Consensus 318 ~r~V~iD~GAn~~g~sv~~~F~~~Y-P~~~~~f~V~afE~np~~~~~~~---~~~~V~~~~~Av 377 (518)
++..+|+||.| .|. ++..+.+.. |+ .|+++|.|+.+.+.+. ..+++++++.-+
T Consensus 58 ~~~~VlEIGPG-~G~-LT~~Ll~~~~~~-----~vvavE~D~~l~~~L~~~~~~~~l~ii~~D~ 114 (353)
T 1i4w_A 58 EELKVLDLYPG-VGI-QSAIFYNKYCPR-----QYSLLEKRSSLYKFLNAKFEGSPLQILKRDP 114 (353)
T ss_dssp TTCEEEEESCT-TCH-HHHHHHHHHCCS-----EEEEECCCHHHHHHHHHHTTTSSCEEECSCT
T ss_pred CCCEEEEECCC-CCH-HHHHHHhhCCCC-----EEEEEecCHHHHHHHHHhccCCCEEEEECCc
Confidence 46899999999 684 877777643 43 6999999999765543 347899998754
No 407
>3uzu_A Ribosomal RNA small subunit methyltransferase A; ssgcid, seattle structural genomics center for infectio disease; 1.75A {Burkholderia pseudomallei}
Probab=56.14 E-value=7.6 Score=38.23 Aligned_cols=56 Identities=13% Similarity=0.120 Sum_probs=38.3
Q ss_pred cCCceEEEEeCCCCCCcchhhhhhhhCCCCCcceEEEEEcCCccchHhhcc--CCceEEEee
Q 010086 316 FKNRYVYVDVGARSYGSSIGSWFKKQYPKQNKTFDVYAIEADKTFHEEYKV--KKKVKLLPY 375 (518)
Q Consensus 316 ~~~r~V~iD~GAn~~g~sv~~~F~~~YP~~~~~f~V~afE~np~~~~~~~~--~~~V~~~~~ 375 (518)
.+++..++|+|+| .|. ++..+.+..+.. +.+|+++|.|+.+.+.... .++++++..
T Consensus 40 ~~~~~~VLEIG~G-~G~-lt~~La~~~~~~--~~~V~avDid~~~l~~a~~~~~~~v~~i~~ 97 (279)
T 3uzu_A 40 PERGERMVEIGPG-LGA-LTGPVIARLATP--GSPLHAVELDRDLIGRLEQRFGELLELHAG 97 (279)
T ss_dssp CCTTCEEEEECCT-TST-THHHHHHHHCBT--TBCEEEEECCHHHHHHHHHHHGGGEEEEES
T ss_pred CCCcCEEEEEccc-cHH-HHHHHHHhCCCc--CCeEEEEECCHHHHHHHHHhcCCCcEEEEC
Confidence 3467789999999 585 656776655420 1249999999987654432 357777765
No 408
>3mti_A RRNA methylase; SAM-dependent, PSI, MCSG, structural genomics, midwest cente structural genomics, protein structure initiative; 1.95A {Streptococcus thermophilus} PDB: 3lby_A*
Probab=56.03 E-value=15 Score=32.44 Aligned_cols=51 Identities=14% Similarity=0.227 Sum_probs=34.6
Q ss_pred cCCceEEEEeCCCCCCcchhhhhhhhCCCCCcceEEEEEcCCccchHh----hc--cCCceEEEe
Q 010086 316 FKNRYVYVDVGARSYGSSIGSWFKKQYPKQNKTFDVYAIEADKTFHEE----YK--VKKKVKLLP 374 (518)
Q Consensus 316 ~~~r~V~iD~GAn~~g~sv~~~F~~~YP~~~~~f~V~afE~np~~~~~----~~--~~~~V~~~~ 374 (518)
++++..++|+|++. |. ++.++.+. ..+|+++|.+|...+. .. +.++|+++.
T Consensus 20 ~~~~~~vLDiGcG~-G~-~~~~la~~------~~~v~~vD~s~~~l~~a~~~~~~~~~~~v~~~~ 76 (185)
T 3mti_A 20 LDDESIVVDATMGN-GN-DTAFLAGL------SKKVYAFDVQEQALGKTSQRLSDLGIENTELIL 76 (185)
T ss_dssp CCTTCEEEESCCTT-SH-HHHHHHTT------SSEEEEEESCHHHHHHHHHHHHHHTCCCEEEEE
T ss_pred CCCCCEEEEEcCCC-CH-HHHHHHHh------CCEEEEEECCHHHHHHHHHHHHHcCCCcEEEEe
Confidence 45778899999994 75 54555543 2389999999986432 22 236677665
No 409
>3g89_A Ribosomal RNA small subunit methyltransferase G; 16S rRNA methyltransferase, translation, cytoplasm, rRNA processing; HET: HIC SAM AMP; 1.50A {Thermus thermophilus} PDB: 3g88_A* 3g8a_A* 3g8b_A*
Probab=55.71 E-value=19 Score=34.33 Aligned_cols=53 Identities=17% Similarity=0.098 Sum_probs=36.2
Q ss_pred CCceEEEEeCCCCCCcchhhhhhhhCCCCCcceEEEEEcCCccchHhh------ccCCceEEEee
Q 010086 317 KNRYVYVDVGARSYGSSIGSWFKKQYPKQNKTFDVYAIEADKTFHEEY------KVKKKVKLLPY 375 (518)
Q Consensus 317 ~~r~V~iD~GAn~~g~sv~~~F~~~YP~~~~~f~V~afE~np~~~~~~------~~~~~V~~~~~ 375 (518)
++..-++|+|++. |. ++-.+...+|.. +|+++|.++...+.. .+..||+++..
T Consensus 79 ~~~~~vLDiG~G~-G~-~~i~la~~~~~~----~v~~vD~s~~~~~~a~~~~~~~~l~~v~~~~~ 137 (249)
T 3g89_A 79 QGPLRVLDLGTGA-GF-PGLPLKIVRPEL----ELVLVDATRKKVAFVERAIEVLGLKGARALWG 137 (249)
T ss_dssp CSSCEEEEETCTT-TT-THHHHHHHCTTC----EEEEEESCHHHHHHHHHHHHHHTCSSEEEEEC
T ss_pred CCCCEEEEEcCCC-CH-HHHHHHHHCCCC----EEEEEECCHHHHHHHHHHHHHhCCCceEEEEC
Confidence 4567899999994 74 434566677853 899999999754321 13456877764
No 410
>3id6_C Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; C/D guide RNA, 2'-O-methylation, coiled-coil, methyltransfer binding, rRNA processing; HET: SAM; 2.60A {Sulfolobus solfataricus} SCOP: c.66.1.0 PDB: 3id5_B* 3pla_E*
Probab=55.56 E-value=15 Score=35.05 Aligned_cols=55 Identities=16% Similarity=0.137 Sum_probs=37.2
Q ss_pred cccCCceEEEEeCCCCCCcchhhhhhhhC-CCCCcceEEEEEcCCccchHh----hccCCceEEEe
Q 010086 314 ISFKNRYVYVDVGARSYGSSIGSWFKKQY-PKQNKTFDVYAIEADKTFHEE----YKVKKKVKLLP 374 (518)
Q Consensus 314 ~s~~~r~V~iD~GAn~~g~sv~~~F~~~Y-P~~~~~f~V~afE~np~~~~~----~~~~~~V~~~~ 374 (518)
+.++++..++|+|++. |. .+..+.+.- |.. .|+++|.+|...+. -...+||+++.
T Consensus 72 ~~l~~g~~VLDlG~Gt-G~-~t~~la~~v~~~G----~V~avD~s~~~l~~l~~~a~~r~nv~~i~ 131 (232)
T 3id6_C 72 NPIRKGTKVLYLGAAS-GT-TISHVSDIIELNG----KAYGVEFSPRVVRELLLVAQRRPNIFPLL 131 (232)
T ss_dssp CSCCTTCEEEEETCTT-SH-HHHHHHHHHTTTS----EEEEEECCHHHHHHHHHHHHHCTTEEEEE
T ss_pred cCCCCCCEEEEEeecC-CH-HHHHHHHHhCCCC----EEEEEECcHHHHHHHHHHhhhcCCeEEEE
Confidence 5578899999999985 75 445665543 433 79999999964322 22346777654
No 411
>2gpy_A O-methyltransferase; structural genomics, PSI, protein structure initiative, NEW research center for structural genomics, nysgxrc; HET: MSE; 1.90A {Bacillus halodurans}
Probab=55.49 E-value=11 Score=34.78 Aligned_cols=40 Identities=18% Similarity=0.252 Sum_probs=31.1
Q ss_pred CCceEEEEeCCCCCCcchhhhhhhhCCCCCcceEEEEEcCCccchH
Q 010086 317 KNRYVYVDVGARSYGSSIGSWFKKQYPKQNKTFDVYAIEADKTFHE 362 (518)
Q Consensus 317 ~~r~V~iD~GAn~~g~sv~~~F~~~YP~~~~~f~V~afE~np~~~~ 362 (518)
.+...++|+|++ .|. .+.++.+.+|. .+|+++|.+|...+
T Consensus 53 ~~~~~vLdiG~G-~G~-~~~~la~~~~~----~~v~~vD~~~~~~~ 92 (233)
T 2gpy_A 53 AAPARILEIGTA-IGY-SAIRMAQALPE----ATIVSIERDERRYE 92 (233)
T ss_dssp HCCSEEEEECCT-TSH-HHHHHHHHCTT----CEEEEECCCHHHHH
T ss_pred cCCCEEEEecCC-CcH-HHHHHHHHCCC----CEEEEEECCHHHHH
Confidence 356689999999 585 44788888883 38999999998644
No 412
>1xdz_A Methyltransferase GIDB; MCSG, protein structure initiative, structural genomics, methyltransferase fold, PSI; 1.60A {Bacillus subtilis} SCOP: c.66.1.20
Probab=54.89 E-value=18 Score=33.79 Aligned_cols=53 Identities=15% Similarity=0.090 Sum_probs=35.2
Q ss_pred CCceEEEEeCCCCCCcchhhhhhhhCCCCCcceEEEEEcCCccchHh----hc--cCCceEEEee
Q 010086 317 KNRYVYVDVGARSYGSSIGSWFKKQYPKQNKTFDVYAIEADKTFHEE----YK--VKKKVKLLPY 375 (518)
Q Consensus 317 ~~r~V~iD~GAn~~g~sv~~~F~~~YP~~~~~f~V~afE~np~~~~~----~~--~~~~V~~~~~ 375 (518)
++...++|+|++. |. ++-++...+|. .+|+++|.++...+. .. +.++|+++..
T Consensus 69 ~~~~~vLDiG~G~-G~-~~~~la~~~~~----~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~ 127 (240)
T 1xdz_A 69 NQVNTICDVGAGA-GF-PSLPIKICFPH----LHVTIVDSLNKRITFLEKLSEALQLENTTFCHD 127 (240)
T ss_dssp GGCCEEEEECSSS-CT-THHHHHHHCTT----CEEEEEESCHHHHHHHHHHHHHHTCSSEEEEES
T ss_pred CCCCEEEEecCCC-CH-HHHHHHHhCCC----CEEEEEeCCHHHHHHHHHHHHHcCCCCEEEEec
Confidence 4567899999994 74 43566655664 389999999964332 11 3356777764
No 413
>3qv2_A 5-cytosine DNA methyltransferase; DNMT2, ehmeth; HET: SAH; 2.15A {Entamoeba histolytica}
Probab=54.58 E-value=14 Score=37.19 Aligned_cols=81 Identities=11% Similarity=0.054 Sum_probs=54.2
Q ss_pred CCeEEEEcCCCCHhHHHHHhcCC--CcE-EEEecCCC---------CCcEEeccCCCCC---CCCCceeEEEEcCc--ee
Q 010086 117 SAKSLCVETQYGQDVFALKEIGV--EDS-IGIFKKSS---------KPLVISGEGHRIP---FDGNTFDFVFVGGA--RL 179 (518)
Q Consensus 117 ~~rvLDVGcGtG~~~~~L~~~g~--~~v-~gID~s~~---------~~l~~~~da~~LP---f~D~SFD~V~s~~~--~l 179 (518)
.-+++|+-||.|.....+.+.|+ ..+ .++|+++. +.....+|..++. +++..+|+++...= .|
T Consensus 10 ~~~vidLFaG~GG~~~G~~~aG~~~~~v~~a~e~d~~a~~ty~~N~~~~~~~~DI~~~~~~~i~~~~~Dil~ggpPCQ~f 89 (327)
T 3qv2_A 10 QVNVIEFFSGIGGLRSSYERSSININATFIPFDINEIANKIYSKNFKEEVQVKNLDSISIKQIESLNCNTWFMSPPCQPY 89 (327)
T ss_dssp CEEEEEETCTTTHHHHHHHHSSCCCCEEEEEECCCHHHHHHHHHHHCCCCBCCCTTTCCHHHHHHTCCCEEEECCCCTTC
T ss_pred CCEEEEECCChhHHHHHHHHcCCCceEEEEEEECCHHHHHHHHHHCCCCcccCChhhcCHHHhccCCCCEEEecCCccCc
Confidence 45899999999999999998885 456 69998741 2234567777764 23336899985431 13
Q ss_pred --e------ccCChH-HHHHHHHh-ccc
Q 010086 180 --E------KASKPL-DFASEIVR-TLK 197 (518)
Q Consensus 180 --~------~~~dp~-~~l~Ei~R-VLK 197 (518)
. ...|+. ..+.|+.| +++
T Consensus 90 s~S~ag~~~~~~d~r~~L~~~~~r~~i~ 117 (327)
T 3qv2_A 90 NNSIMSKHKDINDPRAKSVLHLYRDILP 117 (327)
T ss_dssp SHHHHTTTCTTTCGGGHHHHHHHHTTGG
T ss_pred ccccCCCCCCCccccchhHHHHHHHHHH
Confidence 1 223444 56788888 664
No 414
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=54.56 E-value=6.4 Score=43.42 Aligned_cols=37 Identities=24% Similarity=0.421 Sum_probs=27.5
Q ss_pred CCceeEEEEcCceeeccCCh----HHHHHHHHhcccCCcEEEE
Q 010086 166 GNTFDFVFVGGARLEKASKP----LDFASEIVRTLKPEGFAVV 204 (518)
Q Consensus 166 D~SFD~V~s~~~~l~~~~dp----~~~l~Ei~RVLKPGG~lvi 204 (518)
++.||++|.-. |.-..|| ..++.++.|.+||||.+.-
T Consensus 169 ~~~~da~flD~--f~p~~np~~w~~~~~~~l~~~~~~g~~~~t 209 (689)
T 3pvc_A 169 NNQVDAWFLDG--FAPAKNPDMWNEQLFNAMARMTRPGGTFST 209 (689)
T ss_dssp TTCEEEEEECS--SCC--CCTTCSHHHHHHHHHHEEEEEEEEE
T ss_pred CCceeEEEECC--CCCCCChhhhhHHHHHHHHHHhCCCCEEEe
Confidence 57899999854 4333345 4688999999999998764
No 415
>2bm8_A Cephalosporin hydroxylase CMCI; cephamycin biosynthesis; 2.5A {Streptomyces clavuligerus} SCOP: c.66.1.50 PDB: 2bm9_A* 2br5_A* 2br4_A* 2br3_A*
Probab=54.45 E-value=15 Score=34.60 Aligned_cols=50 Identities=18% Similarity=0.245 Sum_probs=33.3
Q ss_pred ceEEEEeCCCCCCcchhhhhhhh----CCCCCcceEEEEEcCCccchHhhcc-CCceEEEe
Q 010086 319 RYVYVDVGARSYGSSIGSWFKKQ----YPKQNKTFDVYAIEADKTFHEEYKV-KKKVKLLP 374 (518)
Q Consensus 319 r~V~iD~GAn~~g~sv~~~F~~~----YP~~~~~f~V~afE~np~~~~~~~~-~~~V~~~~ 374 (518)
...++|+|++. |. .+.++.+. +|.. +|+++|.+|...+.-+. .++|+++.
T Consensus 82 ~~~VLDiG~Gt-G~-~t~~la~~~~~~~~~~----~V~gvD~s~~~l~~a~~~~~~v~~~~ 136 (236)
T 2bm8_A 82 PRTIVELGVYN-GG-SLAWFRDLTKIMGIDC----QVIGIDRDLSRCQIPASDMENITLHQ 136 (236)
T ss_dssp CSEEEEECCTT-SH-HHHHHHHHHHHTTCCC----EEEEEESCCTTCCCCGGGCTTEEEEE
T ss_pred CCEEEEEeCCC-CH-HHHHHHHhhhhcCCCC----EEEEEeCChHHHHHHhccCCceEEEE
Confidence 45789999994 75 43677765 6643 89999999986432211 24566554
No 416
>3ujc_A Phosphoethanolamine N-methyltransferase; parasite; HET: PC; 1.19A {Plasmodium falciparum} PDB: 3uj9_A* 3uj6_A* 3uj7_A* 3uj8_A* 3uja_A 3ujb_A* 4fgz_A* 3ujd_A*
Probab=54.20 E-value=15 Score=34.12 Aligned_cols=54 Identities=11% Similarity=0.166 Sum_probs=37.4
Q ss_pred ccCCceEEEEeCCCCCCcchhhhhhhhCCCCCcceEEEEEcCCccchHhhc----cCCceEEEee
Q 010086 315 SFKNRYVYVDVGARSYGSSIGSWFKKQYPKQNKTFDVYAIEADKTFHEEYK----VKKKVKLLPY 375 (518)
Q Consensus 315 s~~~r~V~iD~GAn~~g~sv~~~F~~~YP~~~~~f~V~afE~np~~~~~~~----~~~~V~~~~~ 375 (518)
.++++.-++|+|++ .|. ++..+.+.+. .+|+++|.+|...+..+ ..++|+++..
T Consensus 52 ~~~~~~~vLdiG~G-~G~-~~~~l~~~~~-----~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~ 109 (266)
T 3ujc_A 52 ELNENSKVLDIGSG-LGG-GCMYINEKYG-----AHTHGIDICSNIVNMANERVSGNNKIIFEAN 109 (266)
T ss_dssp CCCTTCEEEEETCT-TSH-HHHHHHHHHC-----CEEEEEESCHHHHHHHHHTCCSCTTEEEEEC
T ss_pred CCCCCCEEEEECCC-CCH-HHHHHHHHcC-----CEEEEEeCCHHHHHHHHHHhhcCCCeEEEEC
Confidence 35567789999999 585 5467777663 28999999998654433 2256776654
No 417
>3ftd_A Dimethyladenosine transferase; KSGA, rossmann-like fold, RNA methyltransferase, mtase, anti resistance, methyltransferase, RNA-binding; 1.44A {Aquifex aeolicus} PDB: 3ftc_A 3fte_A 3ftf_A* 3r9x_B*
Probab=54.17 E-value=11 Score=36.27 Aligned_cols=53 Identities=21% Similarity=0.400 Sum_probs=36.0
Q ss_pred cCCceEEEEeCCCCCCcchhhhhhhhCCCCCcceEEEEEcCCccchHhhcc--CCceEEEee
Q 010086 316 FKNRYVYVDVGARSYGSSIGSWFKKQYPKQNKTFDVYAIEADKTFHEEYKV--KKKVKLLPY 375 (518)
Q Consensus 316 ~~~r~V~iD~GAn~~g~sv~~~F~~~YP~~~~~f~V~afE~np~~~~~~~~--~~~V~~~~~ 375 (518)
..++..++|+|+| .|. ++..+.+. +. .+|+++|.|+.+.+.... ..+++++..
T Consensus 29 ~~~~~~VLDiG~G-~G~-lt~~L~~~-~~----~~v~avEid~~~~~~~~~~~~~~v~~i~~ 83 (249)
T 3ftd_A 29 IEEGNTVVEVGGG-TGN-LTKVLLQH-PL----KKLYVIELDREMVENLKSIGDERLEVINE 83 (249)
T ss_dssp CCTTCEEEEEESC-HHH-HHHHHTTS-CC----SEEEEECCCHHHHHHHTTSCCTTEEEECS
T ss_pred CCCcCEEEEEcCc-hHH-HHHHHHHc-CC----CeEEEEECCHHHHHHHHhccCCCeEEEEc
Confidence 3467789999999 474 65555543 32 289999999997665443 346666654
No 418
>3tos_A CALS11; methyltransferase, calicheamicin, structural genomic protein structure initiative, PSI, natPro; HET: MSE SAH GLU; 1.55A {Micromonospora echinospora} PDB: 4gf5_A*
Probab=53.58 E-value=38 Score=33.03 Aligned_cols=38 Identities=5% Similarity=0.014 Sum_probs=26.2
Q ss_pred CCCceeEEEEcCceeeccCChHHHHHHHHhcccCCcEEEEE
Q 010086 165 DGNTFDFVFVGGARLEKASKPLDFASEIVRTLKPEGFAVVH 205 (518)
Q Consensus 165 ~D~SFD~V~s~~~~l~~~~dp~~~l~Ei~RVLKPGG~lvi~ 205 (518)
+..+||+|+.-. ++...-...+..+...|+|||++++-
T Consensus 179 ~~~~~dlv~ID~---D~Y~~t~~~le~~~p~l~~GGvIv~D 216 (257)
T 3tos_A 179 PQTVIALAYFDL---DLYEPTKAVLEAIRPYLTKGSIVAFD 216 (257)
T ss_dssp TTCCEEEEEECC---CCHHHHHHHHHHHGGGEEEEEEEEES
T ss_pred CCCceEEEEEcC---cccchHHHHHHHHHHHhCCCcEEEEc
Confidence 455788888754 22122235678888999999999985
No 419
>1eg2_A Modification methylase RSRI; rossmann fold, exocyclic amino DNA methyltransferase RSRI, D binding, DNA modification, DNA methylation; HET: MTA; 1.75A {Rhodobacter sphaeroides} SCOP: c.66.1.11 PDB: 1nw5_A* 1nw6_A* 1nw7_A* 1nw8_A
Probab=53.33 E-value=15 Score=36.79 Aligned_cols=46 Identities=15% Similarity=0.068 Sum_probs=36.7
Q ss_pred HHHHHHHHHcCCCCCCCeEEEEcCCCCHhHHHHHhcCCCcEEEEecCC
Q 010086 102 SSVFQDLISEGYLSQSAKSLCVETQYGQDVFALKEIGVEDSIGIFKKS 149 (518)
Q Consensus 102 ~~l~~~L~~~gll~~~~rvLDVGcGtG~~~~~L~~~g~~~v~gID~s~ 149 (518)
..+++.++... ..+|+.|||-=||+|..+.+..+.| .+.+|+|+.+
T Consensus 229 ~~l~~~~i~~~-~~~~~~vlDpF~GsGtt~~aa~~~~-r~~ig~e~~~ 274 (319)
T 1eg2_A 229 AAVIERLVRAL-SHPGSTVLDFFAGSGVTARVAIQEG-RNSICTDAAP 274 (319)
T ss_dssp HHHHHHHHHHH-SCTTCEEEETTCTTCHHHHHHHHHT-CEEEEEESST
T ss_pred HHHHHHHHHHh-CCCCCEEEecCCCCCHHHHHHHHcC-CcEEEEECCc
Confidence 45666666543 4789999999999999988777787 7999999865
No 420
>3k6r_A Putative transferase PH0793; structural genomics, PSI structure initiative, midwest center for structural genomic unknown function; 2.10A {Pyrococcus horikoshii} PDB: 3a25_A* 3a26_A*
Probab=52.99 E-value=14 Score=36.48 Aligned_cols=40 Identities=33% Similarity=0.229 Sum_probs=27.4
Q ss_pred CCceEEEEeCCCCCCcchhhhhhhhCCCCCcceEEEEEcCCccchHh
Q 010086 317 KNRYVYVDVGARSYGSSIGSWFKKQYPKQNKTFDVYAIEADKTFHEE 363 (518)
Q Consensus 317 ~~r~V~iD~GAn~~g~sv~~~F~~~YP~~~~~f~V~afE~np~~~~~ 363 (518)
+++.+++|+||| .|. . +......+.. +|+++|.||...+.
T Consensus 124 ~~g~~VlD~~aG-~G~-~-~i~~a~~g~~----~V~avD~np~a~~~ 163 (278)
T 3k6r_A 124 KPDELVVDMFAG-IGH-L-SLPIAVYGKA----KVIAIEKDPYTFKF 163 (278)
T ss_dssp CTTCEEEETTCT-TTT-T-THHHHHHTCC----EEEEECCCHHHHHH
T ss_pred CCCCEEEEecCc-CcH-H-HHHHHHhcCC----eEEEEECCHHHHHH
Confidence 578899999999 474 4 2223333422 79999999986543
No 421
>2pwy_A TRNA (adenine-N(1)-)-methyltransferase; mtase, adoMet, TRMI, tRNA-M1A58; HET: SAH; 1.70A {Thermus thermophilus}
Probab=52.90 E-value=17 Score=33.85 Aligned_cols=54 Identities=15% Similarity=0.130 Sum_probs=36.4
Q ss_pred cCCceEEEEeCCCCCCcchhhhhhhh-CCCCCcceEEEEEcCCccchHhhc-------cCCceEEEee
Q 010086 316 FKNRYVYVDVGARSYGSSIGSWFKKQ-YPKQNKTFDVYAIEADKTFHEEYK-------VKKKVKLLPY 375 (518)
Q Consensus 316 ~~~r~V~iD~GAn~~g~sv~~~F~~~-YP~~~~~f~V~afE~np~~~~~~~-------~~~~V~~~~~ 375 (518)
.+++..++|+|++. |. ++..+.+. .|.. +|+++|.+|...+..+ ..++|+++..
T Consensus 94 ~~~~~~vLdiG~G~-G~-~~~~l~~~~~~~~----~v~~~D~~~~~~~~a~~~~~~~~g~~~v~~~~~ 155 (258)
T 2pwy_A 94 LAPGMRVLEAGTGS-GG-LTLFLARAVGEKG----LVESYEARPHHLAQAERNVRAFWQVENVRFHLG 155 (258)
T ss_dssp CCTTCEEEEECCTT-SH-HHHHHHHHHCTTS----EEEEEESCHHHHHHHHHHHHHHCCCCCEEEEES
T ss_pred CCCCCEEEEECCCc-CH-HHHHHHHHhCCCC----EEEEEeCCHHHHHHHHHHHHHhcCCCCEEEEEC
Confidence 46788999999994 75 44566665 5543 8999999998644321 1356666553
No 422
>3mb5_A SAM-dependent methyltransferase; RNA methyltransferase, M1A, TRMI, intermolecular contacts, R specificity, tetramer, disulfide bond; HET: SAM; 1.60A {Pyrococcus abyssi} PDB: 3lga_A* 3lhd_C*
Probab=52.87 E-value=16 Score=34.14 Aligned_cols=41 Identities=20% Similarity=0.315 Sum_probs=31.0
Q ss_pred cCCceEEEEeCCCCCCcchhhhhhhh-CCCCCcceEEEEEcCCccchH
Q 010086 316 FKNRYVYVDVGARSYGSSIGSWFKKQ-YPKQNKTFDVYAIEADKTFHE 362 (518)
Q Consensus 316 ~~~r~V~iD~GAn~~g~sv~~~F~~~-YP~~~~~f~V~afE~np~~~~ 362 (518)
.+++..++|+|++. |. ++..+.+. .|.. +|+++|.+|...+
T Consensus 91 ~~~~~~vldiG~G~-G~-~~~~l~~~~~~~~----~v~~~D~~~~~~~ 132 (255)
T 3mb5_A 91 ISPGDFIVEAGVGS-GA-LTLFLANIVGPEG----RVVSYEIREDFAK 132 (255)
T ss_dssp CCTTCEEEEECCTT-SH-HHHHHHHHHCTTS----EEEEECSCHHHHH
T ss_pred CCCCCEEEEecCCc-hH-HHHHHHHHhCCCe----EEEEEecCHHHHH
Confidence 45778899999994 75 54667666 6643 8999999998643
No 423
>3dh0_A SAM dependent methyltransferase; cystal structure, PSI-2, NYSGXRC, structural genomics, protein structure initiative; HET: SAM; 2.72A {Aquifex aeolicus}
Probab=52.84 E-value=12 Score=33.81 Aligned_cols=54 Identities=26% Similarity=0.268 Sum_probs=36.5
Q ss_pred cCCceEEEEeCCCCCCcchhhhhhhhC-CCCCcceEEEEEcCCccchHhhc------cCCceEEEee
Q 010086 316 FKNRYVYVDVGARSYGSSIGSWFKKQY-PKQNKTFDVYAIEADKTFHEEYK------VKKKVKLLPY 375 (518)
Q Consensus 316 ~~~r~V~iD~GAn~~g~sv~~~F~~~Y-P~~~~~f~V~afE~np~~~~~~~------~~~~V~~~~~ 375 (518)
.+++..++|+|++ .|. ++.++.+.+ |. .+|+++|.++...+..+ ..++|+++..
T Consensus 35 ~~~~~~vLDiG~G-~G~-~~~~l~~~~~~~----~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~ 95 (219)
T 3dh0_A 35 LKEGMTVLDVGTG-AGF-YLPYLSKMVGEK----GKVYAIDVQEEMVNYAWEKVNKLGLKNVEVLKS 95 (219)
T ss_dssp CCTTCEEEESSCT-TCT-THHHHHHHHTTT----CEEEEEESCHHHHHHHHHHHHHHTCTTEEEEEC
T ss_pred CCCCCEEEEEecC-CCH-HHHHHHHHhCCC----cEEEEEECCHHHHHHHHHHHHHcCCCcEEEEec
Confidence 4567789999999 475 446777766 43 38999999998644221 2346766653
No 424
>3g07_A 7SK snRNA methylphosphate capping enzyme; structural genomics consortium (SGC), methyltransferase, phosphoprotein, S-adenosyl-L-methionine; HET: SAM; 2.65A {Homo sapiens}
Probab=52.66 E-value=17 Score=35.25 Aligned_cols=39 Identities=10% Similarity=0.194 Sum_probs=30.6
Q ss_pred CceEEEEeCCCCCCcchhhhhhhhCCCCCcceEEEEEcCCccchH
Q 010086 318 NRYVYVDVGARSYGSSIGSWFKKQYPKQNKTFDVYAIEADKTFHE 362 (518)
Q Consensus 318 ~r~V~iD~GAn~~g~sv~~~F~~~YP~~~~~f~V~afE~np~~~~ 362 (518)
++..++|+|+|. |. ++..+.+.||.. .|+++|.++...+
T Consensus 46 ~~~~VLDiGCG~-G~-~~~~la~~~~~~----~v~gvDis~~~i~ 84 (292)
T 3g07_A 46 RGRDVLDLGCNV-GH-LTLSIACKWGPS----RMVGLDIDSRLIH 84 (292)
T ss_dssp TTSEEEEESCTT-CH-HHHHHHHHTCCS----EEEEEESCHHHHH
T ss_pred CCCcEEEeCCCC-CH-HHHHHHHHcCCC----EEEEECCCHHHHH
Confidence 456789999994 85 556788888753 8999999998654
No 425
>1zq9_A Probable dimethyladenosine transferase; SGC, structural genomics, structural genomics consortium; HET: SAM; 1.90A {Homo sapiens} SCOP: c.66.1.24
Probab=52.57 E-value=14 Score=36.02 Aligned_cols=52 Identities=21% Similarity=0.237 Sum_probs=35.9
Q ss_pred cCCceEEEEeCCCCCCcchhhhhhhhCCCCCcceEEEEEcCCccchHhhc----c---CCceEEEee
Q 010086 316 FKNRYVYVDVGARSYGSSIGSWFKKQYPKQNKTFDVYAIEADKTFHEEYK----V---KKKVKLLPY 375 (518)
Q Consensus 316 ~~~r~V~iD~GAn~~g~sv~~~F~~~YP~~~~~f~V~afE~np~~~~~~~----~---~~~V~~~~~ 375 (518)
.++...++|+|++ .|. ++..+.+... +|+++|.|+...+... . .++++++..
T Consensus 26 ~~~~~~VLDiG~G-~G~-lt~~L~~~~~------~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~ 84 (285)
T 1zq9_A 26 LRPTDVVLEVGPG-TGN-MTVKLLEKAK------KVVACELDPRLVAELHKRVQGTPVASKLQVLVG 84 (285)
T ss_dssp CCTTCEEEEECCT-TST-THHHHHHHSS------EEEEEESCHHHHHHHHHHHTTSTTGGGEEEEES
T ss_pred CCCCCEEEEEcCc-ccH-HHHHHHhhCC------EEEEEECCHHHHHHHHHHHHhcCCCCceEEEEc
Confidence 3567789999999 485 5466666532 7999999998654322 1 157777765
No 426
>3fut_A Dimethyladenosine transferase; methyltransferase, dimethyltransferase, dual-specific methyltransferase, 16S rRNA methyltransferase; 1.52A {Thermus thermophilus} PDB: 3fuu_A* 3fuv_A 3fuw_A* 3fux_A*
Probab=52.30 E-value=17 Score=35.47 Aligned_cols=51 Identities=20% Similarity=0.133 Sum_probs=36.0
Q ss_pred cCCceEEEEeCCCCCCcchhhhhhhhCCCCCcceEEEEEcCCccchHhhcc---CCceEEEee
Q 010086 316 FKNRYVYVDVGARSYGSSIGSWFKKQYPKQNKTFDVYAIEADKTFHEEYKV---KKKVKLLPY 375 (518)
Q Consensus 316 ~~~r~V~iD~GAn~~g~sv~~~F~~~YP~~~~~f~V~afE~np~~~~~~~~---~~~V~~~~~ 375 (518)
.+++ .++|+|+| .|. ++..+.+.. .+|+++|.|+.+.+.... ..+++++..
T Consensus 45 ~~~~-~VLEIG~G-~G~-lt~~L~~~~------~~V~avEid~~~~~~l~~~~~~~~v~vi~~ 98 (271)
T 3fut_A 45 PFTG-PVFEVGPG-LGA-LTRALLEAG------AEVTAIEKDLRLRPVLEETLSGLPVRLVFQ 98 (271)
T ss_dssp CCCS-CEEEECCT-TSH-HHHHHHHTT------CCEEEEESCGGGHHHHHHHTTTSSEEEEES
T ss_pred CCCC-eEEEEeCc-hHH-HHHHHHHcC------CEEEEEECCHHHHHHHHHhcCCCCEEEEEC
Confidence 3456 89999999 584 766666543 279999999998664432 256777764
No 427
>2km1_A Protein DRE2; yeast, antiapoptotic, protein binding; NMR {Saccharomyces cerevisiae}
Probab=51.78 E-value=8 Score=34.42 Aligned_cols=43 Identities=19% Similarity=0.288 Sum_probs=32.2
Q ss_pred CCCCCCceeEEEEcCcee-eccCChHHHHHHHHhcccCCcEEEE
Q 010086 162 IPFDGNTFDFVFVGGARL-EKASKPLDFASEIVRTLKPEGFAVV 204 (518)
Q Consensus 162 LPf~D~SFD~V~s~~~~l-~~~~dp~~~l~Ei~RVLKPGG~lvi 204 (518)
.-+|+++||.|.-..-.= ++..-|..+++-+.+-|||||.+.-
T Consensus 53 VsLp~stYD~V~~lt~~~~~~~~l~r~li~~l~~aLkpgG~L~g 96 (136)
T 2km1_A 53 ITLENAKYETVHYLTPEAQTDIKFPKKLISVLADSLKPNGSLIG 96 (136)
T ss_dssp CCCCSSSCCSEEEECCCSSCSCCCCHHHHHHHHTTCCTTCCEEC
T ss_pred ccCCcccccEEEEecCCccchhhcCHHHHHHHHHHhCCCCEEEe
Confidence 346899999998654201 2234567899999999999999886
No 428
>3trk_A Nonstructural polyprotein; hydrolase; 2.40A {Chikungunya virus}
Probab=51.53 E-value=15 Score=36.50 Aligned_cols=67 Identities=16% Similarity=0.181 Sum_probs=45.0
Q ss_pred CceeEEEEcCc---eeeccC---ChH----HHHHHHHhcccCCcEEEEE-ecCCCccCchhHhhhccCccEEEEeccC
Q 010086 167 NTFDFVFVGGA---RLEKAS---KPL----DFASEIVRTLKPEGFAVVH-VRAKDEYSFNSFLDLFNSCKLVKSRDID 233 (518)
Q Consensus 167 ~SFD~V~s~~~---~l~~~~---dp~----~~l~Ei~RVLKPGG~lvi~-~~~~~~~s~~~~~~lf~~~~~v~~~~v~ 233 (518)
+.||+||..-. -.||.. |-+ ..-....+.|||||.+++. -+..|-.|..-+..+-+.|+-+++-++.
T Consensus 210 grYDlVfvNv~TpyR~HHYQQCeDHA~~l~mL~~~al~~L~pGGtlv~~aYGyADR~SE~vV~alARkF~~~rv~~P~ 287 (324)
T 3trk_A 210 GRYDLVVINIHTPFRIHHYQQCVDHAMKLQMLGGDSLRLLKPGGSLLIRAYGYADRTSERVICVLGRKFRSSRALKPP 287 (324)
T ss_dssp CCEEEEEEECCCCCCSSHHHHHHHHHHHHHHHHHHGGGGEEEEEEEEEEECCCCSHHHHHHHHHHHTTEEEEEEECCT
T ss_pred CceeEEEEecCCccccchHHHHHHHHHHHHHHHHHHHhhcCCCceEEEEeecccccchHHHHHHHHhhheeeeeecCc
Confidence 79999998752 246643 211 2346788999999998775 5666655555566666667666666653
No 429
>3ubt_Y Modification methylase HAEIII; protein-DNA complex, DNA cytosine-5 methyltransferase, DNA B S-adenosyl methionine binding; HET: ATP 2PE; 2.50A {Haemophilus aegyptius} PDB: 1dct_A*
Probab=51.05 E-value=22 Score=35.00 Aligned_cols=87 Identities=17% Similarity=0.152 Sum_probs=56.5
Q ss_pred CeEEEEcCCCCHhHHHHHhcCCCcEEEEecCCC---------CCcEEeccCCCCCCC-CCceeEEEEcCc--ee------
Q 010086 118 AKSLCVETQYGQDVFALKEIGVEDSIGIFKKSS---------KPLVISGEGHRIPFD-GNTFDFVFVGGA--RL------ 179 (518)
Q Consensus 118 ~rvLDVGcGtG~~~~~L~~~g~~~v~gID~s~~---------~~l~~~~da~~LPf~-D~SFD~V~s~~~--~l------ 179 (518)
.++||+=||.|.+...|.+.|+.-+.++|+++. +..++.+|..++... -..+|+++...= .|
T Consensus 1 mkvidLFsG~GG~~~G~~~aG~~~v~a~e~d~~a~~ty~~N~~~~~~~~DI~~i~~~~~~~~D~l~ggpPCQ~fS~ag~~ 80 (331)
T 3ubt_Y 1 MNLISLFSGAGGLDLGFQKAGFRIICANEYDKSIWKTYESNHSAKLIKGDISKISSDEFPKCDGIIGGPPSQSWSEGGSL 80 (331)
T ss_dssp CEEEEESCTTCHHHHHHHHTTCEEEEEEECCTTTHHHHHHHCCSEEEESCGGGCCGGGSCCCSEEECCCCGGGTEETTEE
T ss_pred CeEEEeCcCccHHHHHHHHCCCEEEEEEeCCHHHHHHHHHHCCCCcccCChhhCCHhhCCcccEEEecCCCCCcCCCCCc
Confidence 379999999999999999999878889999753 334567787776421 125899884320 02
Q ss_pred eccCChH-HHHHHHHhc---ccCCcEEEEE
Q 010086 180 EKASKPL-DFASEIVRT---LKPEGFAVVH 205 (518)
Q Consensus 180 ~~~~dp~-~~l~Ei~RV---LKPGG~lvi~ 205 (518)
....|+. ..+.|+.|+ +||- ++++.
T Consensus 81 ~g~~d~R~~L~~~~~r~i~~~~Pk-~~~~E 109 (331)
T 3ubt_Y 81 RGIDDPRGKLFYEYIRILKQKKPI-FFLAE 109 (331)
T ss_dssp CCTTCGGGHHHHHHHHHHHHHCCS-EEEEE
T ss_pred cCCCCchhHHHHHHHHHHhccCCe-EEEee
Confidence 1234553 455555554 6885 34443
No 430
>3i9f_A Putative type 11 methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.50A {Sulfolobus solfataricus}
Probab=50.71 E-value=15 Score=31.78 Aligned_cols=51 Identities=22% Similarity=0.180 Sum_probs=35.7
Q ss_pred cCCceEEEEeCCCCCCcchhhhhhhhCCCCCcceEEEEEcCCccchHhhcc-CCceEEEe
Q 010086 316 FKNRYVYVDVGARSYGSSIGSWFKKQYPKQNKTFDVYAIEADKTFHEEYKV-KKKVKLLP 374 (518)
Q Consensus 316 ~~~r~V~iD~GAn~~g~sv~~~F~~~YP~~~~~f~V~afE~np~~~~~~~~-~~~V~~~~ 374 (518)
.+++..++|+|++ .|. ++.++.+.+ .+|+++|.++...+..+. .++|+++.
T Consensus 15 ~~~~~~vLDiG~G-~G~-~~~~l~~~~------~~v~~vD~s~~~~~~a~~~~~~v~~~~ 66 (170)
T 3i9f_A 15 EGKKGVIVDYGCG-NGF-YCKYLLEFA------TKLYCIDINVIALKEVKEKFDSVITLS 66 (170)
T ss_dssp SSCCEEEEEETCT-TCT-THHHHHTTE------EEEEEECSCHHHHHHHHHHCTTSEEES
T ss_pred cCCCCeEEEECCC-CCH-HHHHHHhhc------CeEEEEeCCHHHHHHHHHhCCCcEEEe
Confidence 4577889999999 475 435666544 289999999987654432 45666555
No 431
>2p35_A Trans-aconitate 2-methyltransferase; SAM dependent methyltrans agrobacterium tumefaciens, structural genomics, PSI-2; HET: SAH; 1.95A {Agrobacterium tumefaciens str}
Probab=50.02 E-value=12 Score=34.71 Aligned_cols=53 Identities=13% Similarity=0.125 Sum_probs=37.5
Q ss_pred CCceEEEEeCCCCCCcchhhhhhhhCCCCCcceEEEEEcCCccchHhhcc-CCceEEEee
Q 010086 317 KNRYVYVDVGARSYGSSIGSWFKKQYPKQNKTFDVYAIEADKTFHEEYKV-KKKVKLLPY 375 (518)
Q Consensus 317 ~~r~V~iD~GAn~~g~sv~~~F~~~YP~~~~~f~V~afE~np~~~~~~~~-~~~V~~~~~ 375 (518)
++..-++|+|++ .|. ++..+.+.+|.. +|+++|.+|...+..+. .++++++..
T Consensus 32 ~~~~~vLdiG~G-~G~-~~~~l~~~~~~~----~v~~~D~s~~~~~~a~~~~~~~~~~~~ 85 (259)
T 2p35_A 32 ERVLNGYDLGCG-PGN-STELLTDRYGVN----VITGIDSDDDMLEKAADRLPNTNFGKA 85 (259)
T ss_dssp SCCSSEEEETCT-TTH-HHHHHHHHHCTT----SEEEEESCHHHHHHHHHHSTTSEEEEC
T ss_pred CCCCEEEEecCc-CCH-HHHHHHHhCCCC----EEEEEECCHHHHHHHHHhCCCcEEEEC
Confidence 455678999999 475 546777777743 79999999987554332 466776654
No 432
>3gqv_A Enoyl reductase; medium-chain reductase (MDR superfamily), rossmann fold, NAD binding, oxidoreductase; HET: NAP; 1.74A {Aspergillus terreus} PDB: 3b6z_A* 3b70_A*
Probab=49.29 E-value=14 Score=37.23 Aligned_cols=82 Identities=10% Similarity=0.084 Sum_probs=49.0
Q ss_pred CCCCeEEEEcCC--CCHhHHHHHh-cCCCcEEEEecCCCC---------CcEEeccCCCC-----CCCCCceeEEEEcCc
Q 010086 115 SQSAKSLCVETQ--YGQDVFALKE-IGVEDSIGIFKKSSK---------PLVISGEGHRI-----PFDGNTFDFVFVGGA 177 (518)
Q Consensus 115 ~~~~rvLDVGcG--tG~~~~~L~~-~g~~~v~gID~s~~~---------~l~~~~da~~L-----Pf~D~SFD~V~s~~~ 177 (518)
++|.+||-+|++ .|..+..+++ .| .+|+++. ++.. ..++.....++ ...++.+|+|+....
T Consensus 163 ~~g~~VlV~Ga~G~vG~~a~qla~~~G-a~Vi~~~-~~~~~~~~~~lGa~~vi~~~~~~~~~~v~~~t~g~~d~v~d~~g 240 (371)
T 3gqv_A 163 SKPVYVLVYGGSTATATVTMQMLRLSG-YIPIATC-SPHNFDLAKSRGAEEVFDYRAPNLAQTIRTYTKNNLRYALDCIT 240 (371)
T ss_dssp SSCCEEEEESTTSHHHHHHHHHHHHTT-CEEEEEE-CGGGHHHHHHTTCSEEEETTSTTHHHHHHHHTTTCCCEEEESSC
T ss_pred CCCcEEEEECCCcHHHHHHHHHHHHCC-CEEEEEe-CHHHHHHHHHcCCcEEEECCCchHHHHHHHHccCCccEEEECCC
Confidence 789999999994 3776655554 56 4888875 4311 01111111100 011234999987653
Q ss_pred eeeccCChHHHHHHHHhcc-cCCcEEEEE
Q 010086 178 RLEKASKPLDFASEIVRTL-KPEGFAVVH 205 (518)
Q Consensus 178 ~l~~~~dp~~~l~Ei~RVL-KPGG~lvi~ 205 (518)
-...+..+.+.| |+||+++..
T Consensus 241 -------~~~~~~~~~~~l~~~~G~iv~~ 262 (371)
T 3gqv_A 241 -------NVESTTFCFAAIGRAGGHYVSL 262 (371)
T ss_dssp -------SHHHHHHHHHHSCTTCEEEEES
T ss_pred -------chHHHHHHHHHhhcCCCEEEEE
Confidence 124577888888 799998764
No 433
>3tr6_A O-methyltransferase; cellular processes; HET: SAH; 2.70A {Coxiella burnetii} SCOP: c.66.1.0
Probab=49.23 E-value=17 Score=33.20 Aligned_cols=41 Identities=15% Similarity=0.123 Sum_probs=30.8
Q ss_pred CCceEEEEeCCCCCCcchhhhhhhhCCCCCcceEEEEEcCCccchH
Q 010086 317 KNRYVYVDVGARSYGSSIGSWFKKQYPKQNKTFDVYAIEADKTFHE 362 (518)
Q Consensus 317 ~~r~V~iD~GAn~~g~sv~~~F~~~YP~~~~~f~V~afE~np~~~~ 362 (518)
.+...++|+|++ .|. .+.++.+.+|. +.+|+++|.+|...+
T Consensus 63 ~~~~~vLdiG~G-~G~-~~~~la~~~~~---~~~v~~vD~~~~~~~ 103 (225)
T 3tr6_A 63 MQAKKVIDIGTF-TGY-SAIAMGLALPK---DGTLITCDVDEKSTA 103 (225)
T ss_dssp HTCSEEEEECCT-TSH-HHHHHHTTCCT---TCEEEEEESCHHHHH
T ss_pred hCCCEEEEeCCc-chH-HHHHHHHhCCC---CCEEEEEeCCHHHHH
Confidence 356689999999 485 44788888873 238999999997543
No 434
>1o54_A SAM-dependent O-methyltransferase; TM0748, structural genomi PSI, protein structure initiative, joint center for structu genomics; 1.65A {Thermotoga maritima} SCOP: c.66.1.13
Probab=49.10 E-value=17 Score=34.67 Aligned_cols=41 Identities=22% Similarity=0.341 Sum_probs=30.5
Q ss_pred cCCceEEEEeCCCCCCcchhhhhhhh-CCCCCcceEEEEEcCCccchH
Q 010086 316 FKNRYVYVDVGARSYGSSIGSWFKKQ-YPKQNKTFDVYAIEADKTFHE 362 (518)
Q Consensus 316 ~~~r~V~iD~GAn~~g~sv~~~F~~~-YP~~~~~f~V~afE~np~~~~ 362 (518)
.+++..++|+|++. |. ++..+.+. .|.. +|+++|.+|...+
T Consensus 110 ~~~~~~VLDiG~G~-G~-~~~~la~~~~~~~----~v~~vD~s~~~~~ 151 (277)
T 1o54_A 110 VKEGDRIIDTGVGS-GA-MCAVLARAVGSSG----KVFAYEKREEFAK 151 (277)
T ss_dssp CCTTCEEEEECCTT-SH-HHHHHHHHTTTTC----EEEEECCCHHHHH
T ss_pred CCCCCEEEEECCcC-CH-HHHHHHHHhCCCc----EEEEEECCHHHHH
Confidence 45778899999995 75 54566666 5643 8999999998644
No 435
>1ve3_A Hypothetical protein PH0226; dimer, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function, NPPSFA; HET: SAM; 2.10A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=49.09 E-value=17 Score=32.86 Aligned_cols=49 Identities=12% Similarity=0.152 Sum_probs=33.5
Q ss_pred ceEEEEeCCCCCCcchhhhhhhhCCCCCcceEEEEEcCCccchHhh----c-cCCceEEEee
Q 010086 319 RYVYVDVGARSYGSSIGSWFKKQYPKQNKTFDVYAIEADKTFHEEY----K-VKKKVKLLPY 375 (518)
Q Consensus 319 r~V~iD~GAn~~g~sv~~~F~~~YP~~~~~f~V~afE~np~~~~~~----~-~~~~V~~~~~ 375 (518)
...++|+|++ -|. ++..+.+.+| +|+++|.+|...+.. . ..++|+++..
T Consensus 39 ~~~vLDlG~G-~G~-~~~~l~~~~~------~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~ 92 (227)
T 1ve3_A 39 RGKVLDLACG-VGG-FSFLLEDYGF------EVVGVDISEDMIRKAREYAKSRESNVEFIVG 92 (227)
T ss_dssp CCEEEEETCT-TSH-HHHHHHHTTC------EEEEEESCHHHHHHHHHHHHHTTCCCEEEEC
T ss_pred CCeEEEEecc-CCH-HHHHHHHcCC------EEEEEECCHHHHHHHHHHHHhcCCCceEEEC
Confidence 5578999999 475 5467776665 799999999864432 2 1256766653
No 436
>1gu7_A Enoyl-[acyl-carrier-protein] reductase [NADPH, B-specific] 1,mitochondrial; oxidoreductase, thioester reduction, fatty acids; 1.70A {Candida tropicalis} SCOP: b.35.1.2 c.2.1.1 PDB: 1guf_A* 1n9g_B* 1n9g_A* 1gyr_A 1h0k_A
Probab=48.78 E-value=14 Score=36.96 Aligned_cols=92 Identities=13% Similarity=0.165 Sum_probs=53.0
Q ss_pred HHHHHHcCCCCCC-CeEEEEcC-CC-CHhHHHHHh-cCCCcEEEEecCCCC-----Cc--------EEeccC---CCC--
Q 010086 105 FQDLISEGYLSQS-AKSLCVET-QY-GQDVFALKE-IGVEDSIGIFKKSSK-----PL--------VISGEG---HRI-- 162 (518)
Q Consensus 105 ~~~L~~~gll~~~-~rvLDVGc-Gt-G~~~~~L~~-~g~~~v~gID~s~~~-----~l--------~~~~da---~~L-- 162 (518)
++-|...+-+++| .+||-.|+ |. |..+..+++ .| .+++++..++.. .. ++..+. .++
T Consensus 155 ~~~l~~~~~~~~g~~~VlV~Ga~G~vG~~aiqlak~~G-a~vi~~~~~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~~ 233 (364)
T 1gu7_A 155 YLMLTHYVKLTPGKDWFIQNGGTSAVGKYASQIGKLLN-FNSISVIRDRPNLDEVVASLKELGATQVITEDQNNSREFGP 233 (364)
T ss_dssp HHHHHSSSCCCTTTCEEEESCTTSHHHHHHHHHHHHHT-CEEEEEECCCTTHHHHHHHHHHHTCSEEEEHHHHHCGGGHH
T ss_pred HHHHHHhhccCCCCcEEEECCCCcHHHHHHHHHHHHCC-CEEEEEecCccccHHHHHHHHhcCCeEEEecCccchHHHHH
Confidence 3344444567899 99999998 44 666655554 57 577777644321 00 111110 110
Q ss_pred ---CC---CCCceeEEEEcCceeeccCChHHHHHHHHhcccCCcEEEEE
Q 010086 163 ---PF---DGNTFDFVFVGGARLEKASKPLDFASEIVRTLKPEGFAVVH 205 (518)
Q Consensus 163 ---Pf---~D~SFD~V~s~~~~l~~~~dp~~~l~Ei~RVLKPGG~lvi~ 205 (518)
.. ....+|+|+.... - + . ..+..+.|+|||+++..
T Consensus 234 ~i~~~t~~~~~g~Dvvid~~G-~-----~-~-~~~~~~~l~~~G~~v~~ 274 (364)
T 1gu7_A 234 TIKEWIKQSGGEAKLALNCVG-G-----K-S-STGIARKLNNNGLMLTY 274 (364)
T ss_dssp HHHHHHHHHTCCEEEEEESSC-H-----H-H-HHHHHHTSCTTCEEEEC
T ss_pred HHHHHhhccCCCceEEEECCC-c-----h-h-HHHHHHHhccCCEEEEe
Confidence 00 1236999997653 1 1 2 33778999999998774
No 437
>2pt6_A Spermidine synthase; transferase, structural genomics consor SGC,dcadoMet complex; HET: S4M 1PG; 2.00A {Plasmodium falciparum} PDB: 2pss_A* 2pt9_A*
Probab=48.71 E-value=1.2e+02 Score=30.06 Aligned_cols=38 Identities=24% Similarity=0.101 Sum_probs=27.1
Q ss_pred ceEEEEeCCCCCCcchhhhhhhhCCCCCcceEEEEEcCCccchH
Q 010086 319 RYVYVDVGARSYGSSIGSWFKKQYPKQNKTFDVYAIEADKTFHE 362 (518)
Q Consensus 319 r~V~iD~GAn~~g~sv~~~F~~~YP~~~~~f~V~afE~np~~~~ 362 (518)
..-++|+|++. |. ++..+.+..|. .+|+++|.||...+
T Consensus 117 ~~~VLdiG~G~-G~-~~~~l~~~~~~----~~v~~vDis~~~l~ 154 (321)
T 2pt6_A 117 PKNVLVVGGGD-GG-IIRELCKYKSV----ENIDICEIDETVIE 154 (321)
T ss_dssp CCEEEEEECTT-CH-HHHHHTTCTTC----CEEEEEESCHHHHH
T ss_pred CCEEEEEcCCc-cH-HHHHHHHcCCC----CEEEEEECCHHHHH
Confidence 34689999994 75 44566655553 38999999998644
No 438
>2avd_A Catechol-O-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Homo sapiens} SCOP: c.66.1.1
Probab=48.66 E-value=21 Score=32.69 Aligned_cols=41 Identities=22% Similarity=0.102 Sum_probs=30.5
Q ss_pred CCceEEEEeCCCCCCcchhhhhhhhCCCCCcceEEEEEcCCccchH
Q 010086 317 KNRYVYVDVGARSYGSSIGSWFKKQYPKQNKTFDVYAIEADKTFHE 362 (518)
Q Consensus 317 ~~r~V~iD~GAn~~g~sv~~~F~~~YP~~~~~f~V~afE~np~~~~ 362 (518)
.+...++|+|++ .|.+. .++.+..|. +.+|+++|.+|...+
T Consensus 68 ~~~~~vLdiG~G-~G~~~-~~la~~~~~---~~~v~~vD~~~~~~~ 108 (229)
T 2avd_A 68 IQAKKALDLGTF-TGYSA-LALALALPA---DGRVVTCEVDAQPPE 108 (229)
T ss_dssp TTCCEEEEECCT-TSHHH-HHHHTTSCT---TCEEEEEESCSHHHH
T ss_pred cCCCEEEEEcCC-ccHHH-HHHHHhCCC---CCEEEEEECCHHHHH
Confidence 456789999999 58643 677777763 238999999998643
No 439
>3g5t_A Trans-aconitate 3-methyltransferase; structural genomics, protein structure initiative, PSI, center for eukaryotic structural genomics; HET: MSE SAH T8N; 1.12A {Saccharomyces cerevisiae}
Probab=48.60 E-value=23 Score=34.11 Aligned_cols=53 Identities=19% Similarity=0.199 Sum_probs=36.9
Q ss_pred CCceEEEEeCCCCCCcchhhhhhhhC-CCCCcceEEEEEcCCccchHhhc--------cCCceEEEee
Q 010086 317 KNRYVYVDVGARSYGSSIGSWFKKQY-PKQNKTFDVYAIEADKTFHEEYK--------VKKKVKLLPY 375 (518)
Q Consensus 317 ~~r~V~iD~GAn~~g~sv~~~F~~~Y-P~~~~~f~V~afE~np~~~~~~~--------~~~~V~~~~~ 375 (518)
+++..++|+|++ .|. ++..+.+.+ |. .+|+++|++|...+..+ ..++|+++..
T Consensus 35 ~~~~~vLDiGcG-~G~-~~~~la~~~~~~----~~v~gvD~s~~~~~~a~~~~~~~~~~~~~v~~~~~ 96 (299)
T 3g5t_A 35 GERKLLVDVGCG-PGT-ATLQMAQELKPF----EQIIGSDLSATMIKTAEVIKEGSPDTYKNVSFKIS 96 (299)
T ss_dssp SCCSEEEEETCT-TTH-HHHHHHHHSSCC----SEEEEEESCHHHHHHHHHHHHHCC-CCTTEEEEEC
T ss_pred CCCCEEEEECCC-CCH-HHHHHHHhCCCC----CEEEEEeCCHHHHHHHHHHHHhccCCCCceEEEEc
Confidence 367889999999 485 446677666 43 38999999998644322 1467777664
No 440
>2py6_A Methyltransferase FKBM; YP_546752.1, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; 2.15A {Methylobacillus flagellatus KT} SCOP: c.66.1.56
Probab=47.94 E-value=14 Score=38.30 Aligned_cols=36 Identities=22% Similarity=0.175 Sum_probs=28.2
Q ss_pred CCCCCeEEEEcCCCCHhHHHHH-hc-C-CCcEEEEecCC
Q 010086 114 LSQSAKSLCVETQYGQDVFALK-EI-G-VEDSIGIFKKS 149 (518)
Q Consensus 114 l~~~~rvLDVGcGtG~~~~~L~-~~-g-~~~v~gID~s~ 149 (518)
++++..++|||++.|..+..++ +. + ..+|++++.++
T Consensus 224 l~~~~~viDvGAn~G~~s~~~a~~~~~~~~~V~afEP~p 262 (409)
T 2py6_A 224 FSDSEKMVDCGASIGESLAGLIGVTKGKFERVWMIEPDR 262 (409)
T ss_dssp CCSSCEEEEETCTTSHHHHHHHHHHTSCCSEEEEECCCH
T ss_pred cCCCCEEEECCCCcCHHHHHHHHHhcCCCCEEEEEcCCH
Confidence 3788999999999999987766 43 3 36899998653
No 441
>2yxe_A Protein-L-isoaspartate O-methyltransferase; rossman-type fold, alpha/beta/alpha sandwich structure, STRU genomics, NPPSFA; 2.00A {Methanocaldococcus jannaschii}
Probab=47.38 E-value=20 Score=32.49 Aligned_cols=53 Identities=15% Similarity=0.043 Sum_probs=35.2
Q ss_pred CCceEEEEeCCCCCCcchhhhhhhhC-CCCCcceEEEEEcCCccchHhhc------cCCceEEEee
Q 010086 317 KNRYVYVDVGARSYGSSIGSWFKKQY-PKQNKTFDVYAIEADKTFHEEYK------VKKKVKLLPY 375 (518)
Q Consensus 317 ~~r~V~iD~GAn~~g~sv~~~F~~~Y-P~~~~~f~V~afE~np~~~~~~~------~~~~V~~~~~ 375 (518)
+++.-++|+|++ .|. ++..+.+.+ |. .+|+++|.+|...+.-+ ..++++++..
T Consensus 76 ~~~~~vLdiG~G-~G~-~~~~l~~~~~~~----~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~ 135 (215)
T 2yxe_A 76 KPGMKVLEIGTG-CGY-HAAVTAEIVGED----GLVVSIERIPELAEKAERTLRKLGYDNVIVIVG 135 (215)
T ss_dssp CTTCEEEEECCT-TSH-HHHHHHHHHCTT----SEEEEEESCHHHHHHHHHHHHHHTCTTEEEEES
T ss_pred CCCCEEEEECCC-ccH-HHHHHHHHhCCC----CEEEEEeCCHHHHHHHHHHHHHcCCCCeEEEEC
Confidence 456788999999 475 446666666 42 28999999998654322 2356666553
No 442
>3ntv_A MW1564 protein; rossmann fold, putative methyltransferase, transferase; HET: MSE; 1.55A {Staphylococcus aureus}
Probab=47.34 E-value=19 Score=33.57 Aligned_cols=40 Identities=20% Similarity=0.256 Sum_probs=30.5
Q ss_pred CCceEEEEeCCCCCCcchhhhhhhhCCCCCcceEEEEEcCCccchH
Q 010086 317 KNRYVYVDVGARSYGSSIGSWFKKQYPKQNKTFDVYAIEADKTFHE 362 (518)
Q Consensus 317 ~~r~V~iD~GAn~~g~sv~~~F~~~YP~~~~~f~V~afE~np~~~~ 362 (518)
.+...++|+|++ .|. .+.++.+.+|. .+|+++|.+|...+
T Consensus 70 ~~~~~vLDiG~G-~G~-~~~~la~~~~~----~~v~~vD~~~~~~~ 109 (232)
T 3ntv_A 70 NNVKNILEIGTA-IGY-SSMQFASISDD----IHVTTIERNETMIQ 109 (232)
T ss_dssp HTCCEEEEECCS-SSH-HHHHHHTTCTT----CEEEEEECCHHHHH
T ss_pred cCCCEEEEEeCc-hhH-HHHHHHHhCCC----CEEEEEECCHHHHH
Confidence 467789999999 485 33677777773 38999999998643
No 443
>4hc4_A Protein arginine N-methyltransferase 6; HRMT1L6, S-adenosyl-L-homocysteine, struc genomics, structural genomics consortium, SGC; HET: SAH; 1.97A {Homo sapiens}
Probab=47.20 E-value=17 Score=37.49 Aligned_cols=51 Identities=33% Similarity=0.473 Sum_probs=33.7
Q ss_pred CceEEEEeCCCCCCcchhhhhhhhCCCCCcceEEEEEcCCccch--Hhh---cc-CCceEEEee
Q 010086 318 NRYVYVDVGARSYGSSIGSWFKKQYPKQNKTFDVYAIEADKTFH--EEY---KV-KKKVKLLPY 375 (518)
Q Consensus 318 ~r~V~iD~GAn~~g~sv~~~F~~~YP~~~~~f~V~afE~np~~~--~~~---~~-~~~V~~~~~ 375 (518)
++++++|+|+|. |- + +.|....... .|||+|.++... .+. ++ ...|+++..
T Consensus 83 ~~k~VLDvG~Gt-Gi-L-s~~Aa~aGA~----~V~ave~s~~~~~a~~~~~~n~~~~~i~~i~~ 139 (376)
T 4hc4_A 83 RGKTVLDVGAGT-GI-L-SIFCAQAGAR----RVYAVEASAIWQQAREVVRFNGLEDRVHVLPG 139 (376)
T ss_dssp TTCEEEEETCTT-SH-H-HHHHHHTTCS----EEEEEECSTTHHHHHHHHHHTTCTTTEEEEES
T ss_pred CCCEEEEeCCCc-cH-H-HHHHHHhCCC----EEEEEeChHHHHHHHHHHHHcCCCceEEEEee
Confidence 578999999984 63 4 6776655432 799999998431 111 12 246888765
No 444
>1xxl_A YCGJ protein; structural genomics, protein structure initiative, PSI, NEW YORK SGX research center for structural genomics, nysgxrc; 2.10A {Bacillus subtilis} SCOP: c.66.1.41 PDB: 2glu_A*
Probab=47.14 E-value=20 Score=33.20 Aligned_cols=52 Identities=17% Similarity=0.206 Sum_probs=35.7
Q ss_pred cCCceEEEEeCCCCCCcchhhhhhhhCCCCCcceEEEEEcCCccchHhhc------cCCceEEEee
Q 010086 316 FKNRYVYVDVGARSYGSSIGSWFKKQYPKQNKTFDVYAIEADKTFHEEYK------VKKKVKLLPY 375 (518)
Q Consensus 316 ~~~r~V~iD~GAn~~g~sv~~~F~~~YP~~~~~f~V~afE~np~~~~~~~------~~~~V~~~~~ 375 (518)
.++..-++|+|++. |. ++..+.+.++ +|+++|.+|...+..+ ..++|+++..
T Consensus 19 ~~~~~~vLDiGcG~-G~-~~~~l~~~~~------~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~ 76 (239)
T 1xxl_A 19 CRAEHRVLDIGAGA-GH-TALAFSPYVQ------ECIGVDATKEMVEVASSFAQEKGVENVRFQQG 76 (239)
T ss_dssp CCTTCEEEEESCTT-SH-HHHHHGGGSS------EEEEEESCHHHHHHHHHHHHHHTCCSEEEEEC
T ss_pred cCCCCEEEEEccCc-CH-HHHHHHHhCC------EEEEEECCHHHHHHHHHHHHHcCCCCeEEEec
Confidence 45778899999994 75 4456666554 7999999998654322 2356776654
No 445
>3p2e_A 16S rRNA methylase; methyltransferase, transferase, NPMA; HET: SAH; 1.68A {Escherichia coli} PDB: 3p2i_A 3p2k_A* 3pb3_A* 3mte_A*
Probab=47.06 E-value=29 Score=32.44 Aligned_cols=38 Identities=16% Similarity=-0.002 Sum_probs=28.3
Q ss_pred cCCceEEEEeCCCCCCcchhhhhhhhCCCCCcceEEEEEcCCcc
Q 010086 316 FKNRYVYVDVGARSYGSSIGSWFKKQYPKQNKTFDVYAIEADKT 359 (518)
Q Consensus 316 ~~~r~V~iD~GAn~~g~sv~~~F~~~YP~~~~~f~V~afE~np~ 359 (518)
.+++..++|+|++. |. ++..+.+.+|. .+|+++|.+|.
T Consensus 22 ~~~~~~vLDiGCG~-G~-~~~~la~~~~~----~~v~GvD~s~~ 59 (225)
T 3p2e_A 22 GQFDRVHIDLGTGD-GR-NIYKLAINDQN----TFYIGIDPVKE 59 (225)
T ss_dssp TTCSEEEEEETCTT-SH-HHHHHHHTCTT----EEEEEECSCCG
T ss_pred CCCCCEEEEEeccC-cH-HHHHHHHhCCC----CEEEEEeCCHH
Confidence 45788999999994 75 43566655663 48999999954
No 446
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=46.67 E-value=44 Score=29.53 Aligned_cols=85 Identities=20% Similarity=0.184 Sum_probs=50.2
Q ss_pred CCeEEEEcCCC-CHh-HHHHHhc-CCCcEEEEecCCC--------CCcEEeccCCCC----CC-CCCceeEEEEcCceee
Q 010086 117 SAKSLCVETQY-GQD-VFALKEI-GVEDSIGIFKKSS--------KPLVISGEGHRI----PF-DGNTFDFVFVGGARLE 180 (518)
Q Consensus 117 ~~rvLDVGcGt-G~~-~~~L~~~-g~~~v~gID~s~~--------~~l~~~~da~~L----Pf-~D~SFD~V~s~~~~l~ 180 (518)
+.+++-+|+|. |.. +..|.+. | .+|+++|.++. ...++.+|..+. .. .-+.+|+|+....
T Consensus 39 ~~~v~IiG~G~~G~~~a~~L~~~~g-~~V~vid~~~~~~~~~~~~g~~~~~gd~~~~~~l~~~~~~~~ad~vi~~~~--- 114 (183)
T 3c85_A 39 HAQVLILGMGRIGTGAYDELRARYG-KISLGIEIREEAAQQHRSEGRNVISGDATDPDFWERILDTGHVKLVLLAMP--- 114 (183)
T ss_dssp TCSEEEECCSHHHHHHHHHHHHHHC-SCEEEEESCHHHHHHHHHTTCCEEECCTTCHHHHHTBCSCCCCCEEEECCS---
T ss_pred CCcEEEECCCHHHHHHHHHHHhccC-CeEEEEECCHHHHHHHHHCCCCEEEcCCCCHHHHHhccCCCCCCEEEEeCC---
Confidence 56899999986 543 3667777 7 58999998642 122345554331 11 1245898887532
Q ss_pred ccCChHHHHHHHHhcccCCcEEEEEe
Q 010086 181 KASKPLDFASEIVRTLKPEGFAVVHV 206 (518)
Q Consensus 181 ~~~dp~~~l~Ei~RVLKPGG~lvi~~ 206 (518)
. ......+.++.|-+.|++.++...
T Consensus 115 ~-~~~~~~~~~~~~~~~~~~~ii~~~ 139 (183)
T 3c85_A 115 H-HQGNQTALEQLQRRNYKGQIAAIA 139 (183)
T ss_dssp S-HHHHHHHHHHHHHTTCCSEEEEEE
T ss_pred C-hHHHHHHHHHHHHHCCCCEEEEEE
Confidence 1 011233445667777777776654
No 447
>1wg8_A Predicted S-adenosylmethionine-dependent methyltransferase; S-adenosyl-methyltransferase, MRAW; HET: SAM; 2.00A {Thermus thermophilus} SCOP: a.60.13.1 c.66.1.23
Probab=46.56 E-value=21 Score=35.58 Aligned_cols=52 Identities=12% Similarity=0.091 Sum_probs=35.9
Q ss_pred ccCCceEEEEeCCCCCCcchhhhhhhhCCCCCcceEEEEEcCCccchH---hhccCCceEEEee
Q 010086 315 SFKNRYVYVDVGARSYGSSIGSWFKKQYPKQNKTFDVYAIEADKTFHE---EYKVKKKVKLLPY 375 (518)
Q Consensus 315 s~~~r~V~iD~GAn~~g~sv~~~F~~~YP~~~~~f~V~afE~np~~~~---~~~~~~~V~~~~~ 375 (518)
+.+++.+||||+.|. |. -+..+.+. +..|++||-||...+ .+.. ++|+++..
T Consensus 19 ~~~~gg~~VD~T~G~-GG-HS~~il~~------~g~VigiD~Dp~Ai~~A~~L~~-~rv~lv~~ 73 (285)
T 1wg8_A 19 AVRPGGVYVDATLGG-AG-HARGILER------GGRVIGLDQDPEAVARAKGLHL-PGLTVVQG 73 (285)
T ss_dssp TCCTTCEEEETTCTT-SH-HHHHHHHT------TCEEEEEESCHHHHHHHHHTCC-TTEEEEES
T ss_pred CCCCCCEEEEeCCCC-cH-HHHHHHHC------CCEEEEEeCCHHHHHHHHhhcc-CCEEEEEC
Confidence 457889999999983 53 33455554 238999999998643 2333 57887775
No 448
>2nyu_A Putative ribosomal RNA methyltransferase 2; SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.76A {Homo sapiens}
Probab=46.14 E-value=22 Score=31.53 Aligned_cols=42 Identities=12% Similarity=0.085 Sum_probs=30.2
Q ss_pred cCCceEEEEeCCCCCCcchhhhhhhhCCCC-----CcceEEEEEcCCcc
Q 010086 316 FKNRYVYVDVGARSYGSSIGSWFKKQYPKQ-----NKTFDVYAIEADKT 359 (518)
Q Consensus 316 ~~~r~V~iD~GAn~~g~sv~~~F~~~YP~~-----~~~f~V~afE~np~ 359 (518)
++++..++|+|++. |. ++..+.+.+|.. ..+.+|+++|.+|.
T Consensus 20 ~~~~~~vLDlGcG~-G~-~~~~la~~~~~~~~~~~~~~~~v~~vD~s~~ 66 (196)
T 2nyu_A 20 LRPGLRVLDCGAAP-GA-WSQVAVQKVNAAGTDPSSPVGFVLGVDLLHI 66 (196)
T ss_dssp CCTTCEEEEETCCS-CH-HHHHHHHHTTTTCCCTTSCCCEEEEECSSCC
T ss_pred CCCCCEEEEeCCCC-CH-HHHHHHHHhccccccccCCCceEEEEechhc
Confidence 35677899999995 75 556777777641 11138999999985
No 449
>3orh_A Guanidinoacetate N-methyltransferase; structura genomics, structural genomics consortium, SGC; HET: SAH; 1.86A {Homo sapiens} PDB: 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=46.10 E-value=17 Score=34.15 Aligned_cols=52 Identities=15% Similarity=0.105 Sum_probs=35.4
Q ss_pred cCCceEEEEeCCCCCCcchhhhhhhhCCCCCcceEEEEEcCCccchHhh----c-cCCceEEEe
Q 010086 316 FKNRYVYVDVGARSYGSSIGSWFKKQYPKQNKTFDVYAIEADKTFHEEY----K-VKKKVKLLP 374 (518)
Q Consensus 316 ~~~r~V~iD~GAn~~g~sv~~~F~~~YP~~~~~f~V~afE~np~~~~~~----~-~~~~V~~~~ 374 (518)
.+++.=++|+|.+ .|.+. .++.+.+|. +|+++|++|...+.- . ...+++++.
T Consensus 58 ~~~G~rVLdiG~G-~G~~~-~~~~~~~~~-----~v~~id~~~~~~~~a~~~~~~~~~~~~~~~ 114 (236)
T 3orh_A 58 SSKGGRVLEVGFG-MAIAA-SKVQEAPID-----EHWIIECNDGVFQRLRDWAPRQTHKVIPLK 114 (236)
T ss_dssp TTTCEEEEEECCT-TSHHH-HHHTTSCEE-----EEEEEECCHHHHHHHHHHGGGCSSEEEEEE
T ss_pred ccCCCeEEEECCC-ccHHH-HHHHHhCCc-----EEEEEeCCHHHHHHHHHHHhhCCCceEEEe
Confidence 3566678999999 58643 677776664 799999999865432 2 234566554
No 450
>3ce6_A Adenosylhomocysteinase; protein-substrate complex, dimer of dimers, NAD binding DOMA amino acid insertional region, hydrolase; HET: ADN NAD; 1.60A {Mycobacterium tuberculosis} PDB: 3dhy_A* 2zj0_A* 2ziz_A* 2zj1_A*
Probab=46.05 E-value=6.7 Score=42.05 Aligned_cols=87 Identities=14% Similarity=0.018 Sum_probs=50.9
Q ss_pred CCCCCCCeEEEEcCCC-CHhH-HHHHhcCCCcEEEEecCCCCCcE-EeccCCCCCCC--CCceeEEEEcCceeeccCChH
Q 010086 112 GYLSQSAKSLCVETQY-GQDV-FALKEIGVEDSIGIFKKSSKPLV-ISGEGHRIPFD--GNTFDFVFVGGARLEKASKPL 186 (518)
Q Consensus 112 gll~~~~rvLDVGcGt-G~~~-~~L~~~g~~~v~gID~s~~~~l~-~~~da~~LPf~--D~SFD~V~s~~~~l~~~~dp~ 186 (518)
+...+|.+|+-+|+|. |..+ ..++..| .+|+++|.++..... ....+...++. -...|+|+..-. -.++-+
T Consensus 269 ~~~l~GktV~IiG~G~IG~~~A~~lka~G-a~Viv~d~~~~~~~~A~~~Ga~~~~l~e~l~~aDvVi~atg-t~~~i~-- 344 (494)
T 3ce6_A 269 DALIGGKKVLICGYGDVGKGCAEAMKGQG-ARVSVTEIDPINALQAMMEGFDVVTVEEAIGDADIVVTATG-NKDIIM-- 344 (494)
T ss_dssp CCCCTTCEEEEECCSHHHHHHHHHHHHTT-CEEEEECSCHHHHHHHHHTTCEECCHHHHGGGCSEEEECSS-SSCSBC--
T ss_pred CCCCCcCEEEEEccCHHHHHHHHHHHHCC-CEEEEEeCCHHHHHHHHHcCCEEecHHHHHhCCCEEEECCC-CHHHHH--
Confidence 3466899999999987 5544 5555677 589999976421000 00000001111 135799987643 233221
Q ss_pred HHHHHHHhcccCCcEEEEE
Q 010086 187 DFASEIVRTLKPEGFAVVH 205 (518)
Q Consensus 187 ~~l~Ei~RVLKPGG~lvi~ 205 (518)
.+..+.+||||+++..
T Consensus 345 ---~~~l~~mk~ggilvnv 360 (494)
T 3ce6_A 345 ---LEHIKAMKDHAILGNI 360 (494)
T ss_dssp ---HHHHHHSCTTCEEEEC
T ss_pred ---HHHHHhcCCCcEEEEe
Confidence 3667889999988764
No 451
>2b3t_A Protein methyltransferase HEMK; translation termination, methylation, conformational changes; HET: SAH; 3.10A {Escherichia coli} SCOP: c.66.1.30 PDB: 1t43_A*
Probab=46.01 E-value=27 Score=33.29 Aligned_cols=52 Identities=15% Similarity=0.247 Sum_probs=35.6
Q ss_pred CceEEEEeCCCCCCcchhhhhhhhCCCCCcceEEEEEcCCccchHhhc------cCCceEEEee
Q 010086 318 NRYVYVDVGARSYGSSIGSWFKKQYPKQNKTFDVYAIEADKTFHEEYK------VKKKVKLLPY 375 (518)
Q Consensus 318 ~r~V~iD~GAn~~g~sv~~~F~~~YP~~~~~f~V~afE~np~~~~~~~------~~~~V~~~~~ 375 (518)
+...++|+|++. |. ++..+.+.+|.. +|+++|.+|...+.-+ ..++|+++..
T Consensus 109 ~~~~vLDlG~Gs-G~-~~~~la~~~~~~----~v~~vD~s~~~l~~a~~n~~~~~~~~v~~~~~ 166 (276)
T 2b3t_A 109 QPCRILDLGTGT-GA-IALALASERPDC----EIIAVDRMPDAVSLAQRNAQHLAIKNIHILQS 166 (276)
T ss_dssp SCCEEEEETCTT-SH-HHHHHHHHCTTS----EEEEECSSHHHHHHHHHHHHHHTCCSEEEECC
T ss_pred CCCEEEEecCCc-cH-HHHHHHHhCCCC----EEEEEECCHHHHHHHHHHHHHcCCCceEEEEc
Confidence 455789999994 75 546677777743 8999999998643211 2346777664
No 452
>3ege_A Putative methyltransferase from antibiotic biosyn pathway; YP_324569.1, putative methyltransferase from antibiotic BIOS pathway; 2.40A {Anabaena variabilis atcc 29413}
Probab=45.93 E-value=23 Score=33.37 Aligned_cols=51 Identities=22% Similarity=0.278 Sum_probs=35.5
Q ss_pred CCceEEEEeCCCCCCcchhhhhhhhCCCCCcceEEEEEcCCccchHhhccCCceEEEee
Q 010086 317 KNRYVYVDVGARSYGSSIGSWFKKQYPKQNKTFDVYAIEADKTFHEEYKVKKKVKLLPY 375 (518)
Q Consensus 317 ~~r~V~iD~GAn~~g~sv~~~F~~~YP~~~~~f~V~afE~np~~~~~~~~~~~V~~~~~ 375 (518)
++..-++|+|++ -|. ++..+.+ | +.+|+++|++|...+.-+..++++++..
T Consensus 33 ~~~~~vLDiGcG-~G~-~~~~l~~--~----~~~v~gvD~s~~~~~~a~~~~~~~~~~~ 83 (261)
T 3ege_A 33 PKGSVIADIGAG-TGG-YSVALAN--Q----GLFVYAVEPSIVMRQQAVVHPQVEWFTG 83 (261)
T ss_dssp CTTCEEEEETCT-TSH-HHHHHHT--T----TCEEEEECSCHHHHHSSCCCTTEEEECC
T ss_pred CCCCEEEEEcCc-ccH-HHHHHHh--C----CCEEEEEeCCHHHHHHHHhccCCEEEEC
Confidence 566789999999 475 4455554 3 2489999999977665555557776654
No 453
>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}
Probab=45.86 E-value=8.6 Score=39.84 Aligned_cols=88 Identities=16% Similarity=0.217 Sum_probs=50.5
Q ss_pred CCCeEEEEcCCC-CHhH-HHHHhcCCCcEEEEecCCCCCc-EEe--ccCCCCC------------------------CCC
Q 010086 116 QSAKSLCVETQY-GQDV-FALKEIGVEDSIGIFKKSSKPL-VIS--GEGHRIP------------------------FDG 166 (518)
Q Consensus 116 ~~~rvLDVGcGt-G~~~-~~L~~~g~~~v~gID~s~~~~l-~~~--~da~~LP------------------------f~D 166 (518)
++.+|+-+|+|. |..+ ..+...| .+|+++|.++.... ... ++...++ +.+
T Consensus 183 ~~~kV~ViG~G~iG~~aa~~a~~lG-a~V~v~D~~~~~l~~~~~lGa~~~~l~~~~~~~~gya~~~~~~~~~~~~~~l~e 261 (381)
T 3p2y_A 183 KPASALVLGVGVAGLQALATAKRLG-AKTTGYDVRPEVAEQVRSVGAQWLDLGIDAAGEGGYARELSEAERAQQQQALED 261 (381)
T ss_dssp CCCEEEEESCSHHHHHHHHHHHHHT-CEEEEECSSGGGHHHHHHTTCEECCCC-------------CHHHHHHHHHHHHH
T ss_pred CCCEEEEECchHHHHHHHHHHHHCC-CEEEEEeCCHHHHHHHHHcCCeEEeccccccccccchhhhhHHHHhhhHHHHHH
Confidence 568999999997 5544 4455678 58999998742100 000 0000000 111
Q ss_pred --CceeEEEEcCceeeccCChHHHHHHHHhcccCCcEEEEE
Q 010086 167 --NTFDFVFVGGARLEKASKPLDFASEIVRTLKPEGFAVVH 205 (518)
Q Consensus 167 --~SFD~V~s~~~~l~~~~dp~~~l~Ei~RVLKPGG~lvi~ 205 (518)
...|+|+.... ...-..|.-+-+|+.+-+|||.+++-.
T Consensus 262 ~l~~aDIVI~tv~-iPg~~ap~Lvt~emv~~MkpGsVIVDv 301 (381)
T 3p2y_A 262 AITKFDIVITTAL-VPGRPAPRLVTAAAATGMQPGSVVVDL 301 (381)
T ss_dssp HHTTCSEEEECCC-CTTSCCCCCBCHHHHHTSCTTCEEEET
T ss_pred HHhcCCEEEECCC-CCCcccceeecHHHHhcCCCCcEEEEE
Confidence 56899997531 221112322347999999999877654
No 454
>2ift_A Putative methylase HI0767; NESG, Y767_haein, structural genomics, PSI-2, protein structure initiative; 2.30A {Haemophilus influenzae} SCOP: c.66.1.46
Probab=45.72 E-value=18 Score=32.85 Aligned_cols=38 Identities=32% Similarity=0.226 Sum_probs=26.6
Q ss_pred CceEEEEeCCCCCCcchhhhhhhhCCCCCcceEEEEEcCCccchH
Q 010086 318 NRYVYVDVGARSYGSSIGSWFKKQYPKQNKTFDVYAIEADKTFHE 362 (518)
Q Consensus 318 ~r~V~iD~GAn~~g~sv~~~F~~~YP~~~~~f~V~afE~np~~~~ 362 (518)
++..++|+|++. |. ++..+.+..+. +|+++|.||...+
T Consensus 53 ~~~~vLDlGcGt-G~-~~~~~~~~~~~-----~v~gvD~s~~~l~ 90 (201)
T 2ift_A 53 HQSECLDGFAGS-GS-LGFEALSRQAK-----KVTFLELDKTVAN 90 (201)
T ss_dssp TTCEEEETTCTT-CH-HHHHHHHTTCS-----EEEEECSCHHHHH
T ss_pred CCCeEEEcCCcc-CH-HHHHHHHccCC-----EEEEEECCHHHHH
Confidence 356789999994 74 43444554432 7999999998654
No 455
>3tfw_A Putative O-methyltransferase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Klebsiella pneumoniae subsp}
Probab=45.36 E-value=20 Score=33.80 Aligned_cols=41 Identities=20% Similarity=0.385 Sum_probs=31.2
Q ss_pred CCceEEEEeCCCCCCcchhhhhhhhCCCCCcceEEEEEcCCccchH
Q 010086 317 KNRYVYVDVGARSYGSSIGSWFKKQYPKQNKTFDVYAIEADKTFHE 362 (518)
Q Consensus 317 ~~r~V~iD~GAn~~g~sv~~~F~~~YP~~~~~f~V~afE~np~~~~ 362 (518)
.+..-++|+|++ .|.+. .++.+.+|. +.+|+++|.+|...+
T Consensus 62 ~~~~~VLdiG~G-~G~~~-~~la~~~~~---~~~v~~vD~s~~~~~ 102 (248)
T 3tfw_A 62 TQAKRILEIGTL-GGYST-IWMARELPA---DGQLLTLEADAHHAQ 102 (248)
T ss_dssp HTCSEEEEECCT-TSHHH-HHHHTTSCT---TCEEEEEECCHHHHH
T ss_pred cCCCEEEEecCC-chHHH-HHHHHhCCC---CCEEEEEECCHHHHH
Confidence 466789999999 48643 688888873 238999999998643
No 456
>1ws6_A Methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.50A {Thermus thermophilus} SCOP: c.66.1.46
Probab=45.36 E-value=19 Score=30.89 Aligned_cols=37 Identities=19% Similarity=0.102 Sum_probs=27.4
Q ss_pred CceEEEEeCCCCCCcchhhhhhhhCCCCCcceEEEEEcCCccchH
Q 010086 318 NRYVYVDVGARSYGSSIGSWFKKQYPKQNKTFDVYAIEADKTFHE 362 (518)
Q Consensus 318 ~r~V~iD~GAn~~g~sv~~~F~~~YP~~~~~f~V~afE~np~~~~ 362 (518)
+...++|+|++ .|. ++..+.+..+ .|+++|.||...+
T Consensus 41 ~~~~vLD~GcG-~G~-~~~~l~~~~~------~v~~vD~~~~~~~ 77 (171)
T 1ws6_A 41 RRGRFLDPFAG-SGA-VGLEAASEGW------EAVLVEKDPEAVR 77 (171)
T ss_dssp TCCEEEEETCS-SCH-HHHHHHHTTC------EEEEECCCHHHHH
T ss_pred CCCeEEEeCCC-cCH-HHHHHHHCCC------eEEEEeCCHHHHH
Confidence 46679999999 475 4456666544 4999999998654
No 457
>1yb2_A Hypothetical protein TA0852; structural genomics, methyltransferase, thermoplasma acidoph midwest center for structural genomics, MCSG; 2.01A {Thermoplasma acidophilum} SCOP: c.66.1.13
Probab=45.27 E-value=24 Score=33.72 Aligned_cols=41 Identities=17% Similarity=0.257 Sum_probs=30.7
Q ss_pred cCCceEEEEeCCCCCCcchhhhhhhh-CCCCCcceEEEEEcCCccchH
Q 010086 316 FKNRYVYVDVGARSYGSSIGSWFKKQ-YPKQNKTFDVYAIEADKTFHE 362 (518)
Q Consensus 316 ~~~r~V~iD~GAn~~g~sv~~~F~~~-YP~~~~~f~V~afE~np~~~~ 362 (518)
.+++..++|+|++ .|. ++..+.+. +|.. +|+++|.+|...+
T Consensus 108 ~~~~~~VLD~G~G-~G~-~~~~la~~~~~~~----~v~~vD~s~~~~~ 149 (275)
T 1yb2_A 108 LRPGMDILEVGVG-SGN-MSSYILYALNGKG----TLTVVERDEDNLK 149 (275)
T ss_dssp CCTTCEEEEECCT-TSH-HHHHHHHHHTTSS----EEEEECSCHHHHH
T ss_pred CCCcCEEEEecCC-CCH-HHHHHHHHcCCCC----EEEEEECCHHHHH
Confidence 4677889999999 475 54566665 6643 8999999998644
No 458
>2ozv_A Hypothetical protein ATU0636; structural genomics, predicted transferase, predicted O-methyltransferase, PFAM PF05175; HET: MSE; 1.70A {Agrobacterium tumefaciens str}
Probab=44.54 E-value=17 Score=34.68 Aligned_cols=40 Identities=23% Similarity=0.285 Sum_probs=30.7
Q ss_pred CCceEEEEeCCCCCCcchhhhhhhhCCCCCcceEEEEEcCCccchH
Q 010086 317 KNRYVYVDVGARSYGSSIGSWFKKQYPKQNKTFDVYAIEADKTFHE 362 (518)
Q Consensus 317 ~~r~V~iD~GAn~~g~sv~~~F~~~YP~~~~~f~V~afE~np~~~~ 362 (518)
++...++|+|++. |. ++..+.+.+|. .+|+++|.+|...+
T Consensus 35 ~~~~~VLDlG~G~-G~-~~l~la~~~~~----~~v~gvDi~~~~~~ 74 (260)
T 2ozv_A 35 DRACRIADLGAGA-GA-AGMAVAARLEK----AEVTLYERSQEMAE 74 (260)
T ss_dssp CSCEEEEECCSSS-SH-HHHHHHHHCTT----EEEEEEESSHHHHH
T ss_pred cCCCEEEEeCChH-hH-HHHHHHHhCCC----CeEEEEECCHHHHH
Confidence 4567899999994 74 55677777874 48999999998643
No 459
>2c7p_A Modification methylase HHAI; DNA methyltransferase, methyltransferase, base flipping, restriction system, transferase; HET: 5CM A1P SAH EPE CIT; 1.7A {Haemophilus haemolyticus} SCOP: c.66.1.26 PDB: 10mh_A* 1m0e_A* 1mht_A* 1hmy_A* 1skm_A* 2c7o_A* 2c7q_A* 2hmy_B* 2hr1_A* 3eeo_A* 3mht_A* 4mht_A* 5mht_A* 6mht_A* 7mht_A* 8mht_A* 9mht_A* 2zcj_A* 2z6u_A* 2z6q_A* ...
Probab=44.54 E-value=19 Score=36.23 Aligned_cols=59 Identities=14% Similarity=0.014 Sum_probs=41.6
Q ss_pred CCeEEEEcCCCCHhHHHHHhcCCCcEEEEecCCCC--------CcEEeccCCCCCCC-CCceeEEEEc
Q 010086 117 SAKSLCVETQYGQDVFALKEIGVEDSIGIFKKSSK--------PLVISGEGHRIPFD-GNTFDFVFVG 175 (518)
Q Consensus 117 ~~rvLDVGcGtG~~~~~L~~~g~~~v~gID~s~~~--------~l~~~~da~~LPf~-D~SFD~V~s~ 175 (518)
+.+++|+.||.|.+...+.+.|+..+.++|+++.. +....+|..++.-. -..+|+|+..
T Consensus 11 ~~~~~dLFaG~Gg~~~g~~~aG~~~v~~~e~d~~a~~t~~~N~~~~~~~Di~~~~~~~~~~~D~l~~g 78 (327)
T 2c7p_A 11 GLRFIDLFAGLGGFRLALESCGAECVYSNEWDKYAQEVYEMNFGEKPEGDITQVNEKTIPDHDILCAG 78 (327)
T ss_dssp TCEEEEETCTTTHHHHHHHHTTCEEEEEECCCHHHHHHHHHHHSCCCBSCGGGSCGGGSCCCSEEEEE
T ss_pred CCcEEEECCCcCHHHHHHHHCCCeEEEEEeCCHHHHHHHHHHcCCCCcCCHHHcCHhhCCCCCEEEEC
Confidence 46899999999999999998998889999987420 11115666655311 1248999965
No 460
>3bkx_A SAM-dependent methyltransferase; YP_807781.1, cyclopropane-fatty-acyl-phospholipid synthase-L protein, methyltransferase domain; 1.85A {Lactobacillus casei}
Probab=44.41 E-value=21 Score=33.63 Aligned_cols=39 Identities=15% Similarity=0.211 Sum_probs=29.3
Q ss_pred ccCCceEEEEeCCCCCCcchhhhhhhhC-CCCCcceEEEEEcCCcc
Q 010086 315 SFKNRYVYVDVGARSYGSSIGSWFKKQY-PKQNKTFDVYAIEADKT 359 (518)
Q Consensus 315 s~~~r~V~iD~GAn~~g~sv~~~F~~~Y-P~~~~~f~V~afE~np~ 359 (518)
.++++.-++|+|++ -|. ++..+.+.+ |. .+|+++|+++.
T Consensus 40 ~~~~~~~vLDiGcG-~G~-~~~~l~~~~g~~----~~v~gvD~s~~ 79 (275)
T 3bkx_A 40 QVKPGEKILEIGCG-QGD-LSAVLADQVGSS----GHVTGIDIASP 79 (275)
T ss_dssp TCCTTCEEEEESCT-TSH-HHHHHHHHHCTT----CEEEEECSSCT
T ss_pred CCCCCCEEEEeCCC-CCH-HHHHHHHHhCCC----CEEEEEECCcc
Confidence 34677789999999 475 446777776 42 28999999996
No 461
>3njr_A Precorrin-6Y methylase; methyltransferase, decarboxylase, transferase; HET: SAH PG4; 2.70A {Rhodobacter capsulatus}
Probab=44.09 E-value=23 Score=32.32 Aligned_cols=52 Identities=15% Similarity=0.088 Sum_probs=34.0
Q ss_pred cCCceEEEEeCCCCCCcchhhhhhhhCCCCCcceEEEEEcCCccchHh----hc--cCC-ceEEEee
Q 010086 316 FKNRYVYVDVGARSYGSSIGSWFKKQYPKQNKTFDVYAIEADKTFHEE----YK--VKK-KVKLLPY 375 (518)
Q Consensus 316 ~~~r~V~iD~GAn~~g~sv~~~F~~~YP~~~~~f~V~afE~np~~~~~----~~--~~~-~V~~~~~ 375 (518)
.+++..++|+|++. |. ++..+.+. . .+|+++|.+|...+. .. ..+ +|+++..
T Consensus 53 ~~~~~~vLDlGcG~-G~-~~~~la~~-~-----~~v~~vD~s~~~~~~a~~~~~~~g~~~~v~~~~~ 111 (204)
T 3njr_A 53 PRRGELLWDIGGGS-GS-VSVEWCLA-G-----GRAITIEPRADRIENIQKNIDTYGLSPRMRAVQG 111 (204)
T ss_dssp CCTTCEEEEETCTT-CH-HHHHHHHT-T-----CEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEES
T ss_pred CCCCCEEEEecCCC-CH-HHHHHHHc-C-----CEEEEEeCCHHHHHHHHHHHHHcCCCCCEEEEeC
Confidence 45678899999994 74 43455543 2 389999999986442 21 234 6776653
No 462
>3g5l_A Putative S-adenosylmethionine dependent methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.35A {Listeria monocytogenes str}
Probab=43.86 E-value=27 Score=32.42 Aligned_cols=51 Identities=20% Similarity=0.205 Sum_probs=35.4
Q ss_pred CceEEEEeCCCCCCcchhhhhhhhCCCCCcceEEEEEcCCccchHhhc---cCCceEEEee
Q 010086 318 NRYVYVDVGARSYGSSIGSWFKKQYPKQNKTFDVYAIEADKTFHEEYK---VKKKVKLLPY 375 (518)
Q Consensus 318 ~r~V~iD~GAn~~g~sv~~~F~~~YP~~~~~f~V~afE~np~~~~~~~---~~~~V~~~~~ 375 (518)
++.-++|+|++ .|. ++..+.+.++. +|+++|.++...+..+ ..++|+++..
T Consensus 44 ~~~~vLD~GcG-~G~-~~~~l~~~~~~-----~v~~vD~s~~~~~~a~~~~~~~~~~~~~~ 97 (253)
T 3g5l_A 44 NQKTVLDLGCG-FGW-HCIYAAEHGAK-----KVLGIDLSERMLTEAKRKTTSPVVCYEQK 97 (253)
T ss_dssp TTCEEEEETCT-TCH-HHHHHHHTTCS-----EEEEEESCHHHHHHHHHHCCCTTEEEEEC
T ss_pred CCCEEEEECCC-CCH-HHHHHHHcCCC-----EEEEEECCHHHHHHHHHhhccCCeEEEEc
Confidence 56789999999 475 54677766553 7999999998654332 2456666653
No 463
>3ajd_A Putative methyltransferase MJ0026; tRNA, M5C, rossmann fold, structural genomics, riken structu genomics/proteomics initiative; 1.27A {Methanocaldococcus jannaschii} PDB: 3a4t_A
Probab=43.73 E-value=27 Score=33.50 Aligned_cols=54 Identities=15% Similarity=0.138 Sum_probs=37.1
Q ss_pred CCceEEEEeCCCCCCcchhhhhhhhCCCCCcceEEEEEcCCccchHhhc------cCCceEEEee
Q 010086 317 KNRYVYVDVGARSYGSSIGSWFKKQYPKQNKTFDVYAIEADKTFHEEYK------VKKKVKLLPY 375 (518)
Q Consensus 317 ~~r~V~iD~GAn~~g~sv~~~F~~~YP~~~~~f~V~afE~np~~~~~~~------~~~~V~~~~~ 375 (518)
+++..++|+|++. |. .+..+.+.++.. .+|+++|.++...+..+ +.++|+++..
T Consensus 82 ~~g~~VLDlgaG~-G~-~t~~la~~~~~~---~~v~avD~~~~~l~~~~~~~~~~g~~~v~~~~~ 141 (274)
T 3ajd_A 82 REDDFILDMCAAP-GG-KTTHLAQLMKNK---GTIVAVEISKTRTKALKSNINRMGVLNTIIINA 141 (274)
T ss_dssp CTTCEEEETTCTT-CH-HHHHHHHHTTTC---SEEEEEESCHHHHHHHHHHHHHTTCCSEEEEES
T ss_pred CCcCEEEEeCCCc-cH-HHHHHHHHcCCC---CEEEEECCCHHHHHHHHHHHHHhCCCcEEEEeC
Confidence 4677899999994 74 546677766531 37999999998544322 2357877765
No 464
>1nkv_A Hypothetical protein YJHP; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.90A {Escherichia coli} SCOP: c.66.1.21
Probab=43.70 E-value=26 Score=32.50 Aligned_cols=53 Identities=15% Similarity=0.209 Sum_probs=36.2
Q ss_pred cCCceEEEEeCCCCCCcchhhhhhhhCCCCCcceEEEEEcCCccchHhh----c--c-CCceEEEee
Q 010086 316 FKNRYVYVDVGARSYGSSIGSWFKKQYPKQNKTFDVYAIEADKTFHEEY----K--V-KKKVKLLPY 375 (518)
Q Consensus 316 ~~~r~V~iD~GAn~~g~sv~~~F~~~YP~~~~~f~V~afE~np~~~~~~----~--~-~~~V~~~~~ 375 (518)
++++.-++|+|++. |. ++..+.+.++. +|+++|++|...+.- . . .++|+++..
T Consensus 34 ~~~~~~VLDiGcG~-G~-~~~~la~~~~~-----~v~gvD~s~~~l~~a~~~~~~~~~~~~v~~~~~ 93 (256)
T 1nkv_A 34 MKPGTRILDLGSGS-GE-MLCTWARDHGI-----TGTGIDMSSLFTAQAKRRAEELGVSERVHFIHN 93 (256)
T ss_dssp CCTTCEEEEETCTT-CH-HHHHHHHHTCC-----EEEEEESCHHHHHHHHHHHHHTTCTTTEEEEES
T ss_pred CCCCCEEEEECCCC-CH-HHHHHHHhcCC-----eEEEEeCCHHHHHHHHHHHHhcCCCcceEEEEC
Confidence 45777899999994 75 44567766643 799999999864432 1 1 246777654
No 465
>2hwk_A Helicase NSP2; rossman fold, alpha/beta/alpha, multi-domain, hydrolase; 2.45A {Venezuelan equine encephalitis virus}
Probab=43.29 E-value=53 Score=32.94 Aligned_cols=67 Identities=13% Similarity=0.119 Sum_probs=41.5
Q ss_pred CceeEEEEcCc---eeec-c--CChH----HHHHHHHhcccCCcEEEEEecCCC-ccCchhHhhhccCccEEEEeccC
Q 010086 167 NTFDFVFVGGA---RLEK-A--SKPL----DFASEIVRTLKPEGFAVVHVRAKD-EYSFNSFLDLFNSCKLVKSRDID 233 (518)
Q Consensus 167 ~SFD~V~s~~~---~l~~-~--~dp~----~~l~Ei~RVLKPGG~lvi~~~~~~-~~s~~~~~~lf~~~~~v~~~~v~ 233 (518)
+.+|+|+|..+ .-|| - .|-+ -++.-+.++|||||.+++-+.... -.+..-...|-+.|+.|+.-++.
T Consensus 205 ~k~DvV~SDMApn~sGh~yqQC~DHarii~Lal~fA~~vLkPGGtfV~KvyggaDr~se~lv~~LaR~F~~Vr~vKP~ 282 (320)
T 2hwk_A 205 PKYDIIFVNVRTPYKYHHYQQCEDHAIKLSMLTKKACLHLNPGGTCVSIGYGYADRASESIIGAIARQFKFSRVCKPK 282 (320)
T ss_dssp CCEEEEEEECCCCCCSCHHHHHHHHHHHHHHTHHHHGGGEEEEEEEEEEECCCCSHHHHHHHHHHHTTEEEEEEECCT
T ss_pred CcCCEEEEcCCCCCCCccccccchHHHHHHHHHHHHHHhcCCCceEEEEEecCCcccHHHHHHHHHHhcceeeeeCCC
Confidence 66999998763 2344 1 2222 256788999999999999765443 12222233445667777766653
No 466
>4dzr_A Protein-(glutamine-N5) methyltransferase, release specific; structural genomics, PSI-biology; 2.55A {Alicyclobacillus acidocaldarius subsp}
Probab=43.25 E-value=19 Score=32.09 Aligned_cols=40 Identities=23% Similarity=0.244 Sum_probs=27.9
Q ss_pred CCceEEEEeCCCCCCcchhhhhhhhCCCCCcceEEEEEcCCccchH
Q 010086 317 KNRYVYVDVGARSYGSSIGSWFKKQYPKQNKTFDVYAIEADKTFHE 362 (518)
Q Consensus 317 ~~r~V~iD~GAn~~g~sv~~~F~~~YP~~~~~f~V~afE~np~~~~ 362 (518)
++...++|+|++. |. ++..+.+.+|. .+|+++|.+|...+
T Consensus 29 ~~~~~vLDiG~G~-G~-~~~~l~~~~~~----~~v~~vD~~~~~~~ 68 (215)
T 4dzr_A 29 PSGTRVIDVGTGS-GC-IAVSIALACPG----VSVTAVDLSMDALA 68 (215)
T ss_dssp CTTEEEEEEESSB-CH-HHHHHHHHCTT----EEEEEEECC-----
T ss_pred CCCCEEEEecCCH-hH-HHHHHHHhCCC----CeEEEEECCHHHHH
Confidence 5678899999994 75 54677777773 48999999998644
No 467
>1l3i_A Precorrin-6Y methyltransferase/putative decarboxylase; structural genomics, beta barrel, rossmann fold, tetramer; HET: SAH; 1.95A {Methanothermobacterthermautotrophicus} SCOP: c.66.1.22 PDB: 1kxz_A 1l3b_A 1f38_A 1l3c_A*
Probab=42.99 E-value=26 Score=30.48 Aligned_cols=39 Identities=26% Similarity=0.263 Sum_probs=28.5
Q ss_pred cCCceEEEEeCCCCCCcchhhhhhhhCCCCCcceEEEEEcCCccchH
Q 010086 316 FKNRYVYVDVGARSYGSSIGSWFKKQYPKQNKTFDVYAIEADKTFHE 362 (518)
Q Consensus 316 ~~~r~V~iD~GAn~~g~sv~~~F~~~YP~~~~~f~V~afE~np~~~~ 362 (518)
.+++..++|+|++. |. ++..+.+.+ .+|+++|.+|...+
T Consensus 31 ~~~~~~vldiG~G~-G~-~~~~l~~~~------~~v~~~D~~~~~~~ 69 (192)
T 1l3i_A 31 PGKNDVAVDVGCGT-GG-VTLELAGRV------RRVYAIDRNPEAIS 69 (192)
T ss_dssp CCTTCEEEEESCTT-SH-HHHHHHTTS------SEEEEEESCHHHHH
T ss_pred CCCCCEEEEECCCC-CH-HHHHHHHhc------CEEEEEECCHHHHH
Confidence 45677899999994 75 445565544 28999999998644
No 468
>1h2b_A Alcohol dehydrogenase; oxidoreductase, archaea, hyperthermophIle, zinc; HET: OCA NAJ; 1.62A {Aeropyrum pernix} SCOP: b.35.1.2 c.2.1.1
Probab=42.93 E-value=17 Score=36.44 Aligned_cols=37 Identities=19% Similarity=0.052 Sum_probs=27.6
Q ss_pred CCCCCCCeEEEEcCCC-CHhHHHHHh-c-CCCcEEEEecCC
Q 010086 112 GYLSQSAKSLCVETQY-GQDVFALKE-I-GVEDSIGIFKKS 149 (518)
Q Consensus 112 gll~~~~rvLDVGcGt-G~~~~~L~~-~-g~~~v~gID~s~ 149 (518)
.-+++|++||-+|+|. |..+..+++ . | .+|+++|.++
T Consensus 182 ~~~~~g~~VlV~GaG~vG~~avqlak~~~G-a~Vi~~~~~~ 221 (359)
T 1h2b_A 182 RTLYPGAYVAIVGVGGLGHIAVQLLKVMTP-ATVIALDVKE 221 (359)
T ss_dssp TTCCTTCEEEEECCSHHHHHHHHHHHHHCC-CEEEEEESSH
T ss_pred cCCCCCCEEEEECCCHHHHHHHHHHHHcCC-CeEEEEeCCH
Confidence 5578999999999975 555544444 6 7 5899999763
No 469
>3kr9_A SAM-dependent methyltransferase; class I rossmann-like methyltransferase fold; 2.00A {Streptococcus pneumoniae} PDB: 3ku1_A*
Probab=42.89 E-value=15 Score=34.99 Aligned_cols=40 Identities=13% Similarity=0.020 Sum_probs=30.6
Q ss_pred CCceEEEEeCCCCCCcchhhhhhhhCCCCCcceEEEEEcCCccchH
Q 010086 317 KNRYVYVDVGARSYGSSIGSWFKKQYPKQNKTFDVYAIEADKTFHE 362 (518)
Q Consensus 317 ~~r~V~iD~GAn~~g~sv~~~F~~~YP~~~~~f~V~afE~np~~~~ 362 (518)
+++..++|+|++ .|. ++-...+..|.. .|+|+|.||...+
T Consensus 14 ~~g~~VlDIGtG-sG~-l~i~la~~~~~~----~V~avDi~~~al~ 53 (225)
T 3kr9_A 14 SQGAILLDVGSD-HAY-LPIELVERGQIK----SAIAGEVVEGPYQ 53 (225)
T ss_dssp CTTEEEEEETCS-TTH-HHHHHHHTTSEE----EEEEEESSHHHHH
T ss_pred CCCCEEEEeCCC-cHH-HHHHHHHhCCCC----EEEEEECCHHHHH
Confidence 467899999999 484 655666677754 8999999998643
No 470
>3dou_A Ribosomal RNA large subunit methyltransferase J; cell division, structural genomics, protein structure initiative, PSI; HET: SAM; 1.45A {Thermoplasma volcanium} SCOP: c.66.1.0
Probab=42.70 E-value=31 Score=31.30 Aligned_cols=47 Identities=9% Similarity=0.169 Sum_probs=33.0
Q ss_pred cCCceEEEEeCCCCCCcchhhhhhhhCCCCCcceEEEEEcCCccchHhhccCCceEEEee
Q 010086 316 FKNRYVYVDVGARSYGSSIGSWFKKQYPKQNKTFDVYAIEADKTFHEEYKVKKKVKLLPY 375 (518)
Q Consensus 316 ~~~r~V~iD~GAn~~g~sv~~~F~~~YP~~~~~f~V~afE~np~~~~~~~~~~~V~~~~~ 375 (518)
++++..++|+|++ -|. ++..+.+. ...|+++|.+|.. ..++|+++..
T Consensus 23 ~~~g~~VLDlG~G-~G~-~s~~la~~------~~~V~gvD~~~~~-----~~~~v~~~~~ 69 (191)
T 3dou_A 23 VRKGDAVIEIGSS-PGG-WTQVLNSL------ARKIISIDLQEME-----EIAGVRFIRC 69 (191)
T ss_dssp SCTTCEEEEESCT-TCH-HHHHHTTT------CSEEEEEESSCCC-----CCTTCEEEEC
T ss_pred CCCCCEEEEEeec-CCH-HHHHHHHc------CCcEEEEeccccc-----cCCCeEEEEc
Confidence 3567889999999 474 65555544 2389999999862 2457777654
No 471
>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*
Probab=42.63 E-value=12 Score=38.31 Aligned_cols=33 Identities=15% Similarity=0.181 Sum_probs=24.8
Q ss_pred CCCeEEEEcCCC-CHhH-HHHHhcCCCcEEEEecCC
Q 010086 116 QSAKSLCVETQY-GQDV-FALKEIGVEDSIGIFKKS 149 (518)
Q Consensus 116 ~~~rvLDVGcGt-G~~~-~~L~~~g~~~v~gID~s~ 149 (518)
++.+|+-+|+|. |..+ ..++..| .+|+..|.++
T Consensus 171 ~g~~V~ViGaG~iG~~aa~~a~~~G-a~V~~~d~~~ 205 (384)
T 1l7d_A 171 PPARVLVFGVGVAGLQAIATAKRLG-AVVMATDVRA 205 (384)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTT-CEEEEECSCS
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCC-CEEEEEeCCH
Confidence 578999999997 5544 4445578 4799999875
No 472
>3jwg_A HEN1, methyltransferase type 12; 1.90A {Clostridium thermocellum} PDB: 3jwi_A
Probab=41.92 E-value=21 Score=32.42 Aligned_cols=40 Identities=18% Similarity=0.188 Sum_probs=30.2
Q ss_pred CCceEEEEeCCCCCCcchhhhhhhhCCCCCcceEEEEEcCCccchH
Q 010086 317 KNRYVYVDVGARSYGSSIGSWFKKQYPKQNKTFDVYAIEADKTFHE 362 (518)
Q Consensus 317 ~~r~V~iD~GAn~~g~sv~~~F~~~YP~~~~~f~V~afE~np~~~~ 362 (518)
.+..-++|+|++ .|. ++.++.+.+|. .+|+++|.+|...+
T Consensus 28 ~~~~~vLDiGcG-~G~-~~~~l~~~~~~----~~v~gvD~s~~~~~ 67 (219)
T 3jwg_A 28 VNAKKVIDLGCG-EGN-LLSLLLKDKSF----EQITGVDVSYSVLE 67 (219)
T ss_dssp TTCCEEEEETCT-TCH-HHHHHHTSTTC----CEEEEEESCHHHHH
T ss_pred cCCCEEEEecCC-CCH-HHHHHHhcCCC----CEEEEEECCHHHHH
Confidence 345678999999 485 54677777763 38999999998654
No 473
>1vl5_A Unknown conserved protein BH2331; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: MSE; 1.95A {Bacillus halodurans} SCOP: c.66.1.41
Probab=41.89 E-value=27 Score=32.67 Aligned_cols=52 Identities=15% Similarity=0.165 Sum_probs=35.3
Q ss_pred cCCceEEEEeCCCCCCcchhhhhhhhCCCCCcceEEEEEcCCccchHhhc------cCCceEEEee
Q 010086 316 FKNRYVYVDVGARSYGSSIGSWFKKQYPKQNKTFDVYAIEADKTFHEEYK------VKKKVKLLPY 375 (518)
Q Consensus 316 ~~~r~V~iD~GAn~~g~sv~~~F~~~YP~~~~~f~V~afE~np~~~~~~~------~~~~V~~~~~ 375 (518)
.++..-++|+|++ .|. ++..+.+.++ +|+++|.+|...+.-+ ..++|+++..
T Consensus 35 ~~~~~~vLDiGcG-~G~-~~~~l~~~~~------~v~gvD~s~~~l~~a~~~~~~~~~~~v~~~~~ 92 (260)
T 1vl5_A 35 LKGNEEVLDVATG-GGH-VANAFAPFVK------KVVAFDLTEDILKVARAFIEGNGHQQVEYVQG 92 (260)
T ss_dssp CCSCCEEEEETCT-TCH-HHHHHGGGSS------EEEEEESCHHHHHHHHHHHHHTTCCSEEEEEC
T ss_pred CCCCCEEEEEeCC-CCH-HHHHHHHhCC------EEEEEeCCHHHHHHHHHHHHhcCCCceEEEEe
Confidence 3466789999999 475 5456666554 7999999998644321 2356776654
No 474
>3ggd_A SAM-dependent methyltransferase; YP_325210.1, structural GEN joint center for structural genomics, JCSG; HET: SAH; 2.11A {Anabaena variabilis atcc 29413}
Probab=41.68 E-value=27 Score=32.24 Aligned_cols=51 Identities=14% Similarity=0.270 Sum_probs=35.3
Q ss_pred cCCceEEEEeCCCCCCcchhhhhhhhCCCCCcceEEEEEcCCccchHhhc---cCCceEEEe
Q 010086 316 FKNRYVYVDVGARSYGSSIGSWFKKQYPKQNKTFDVYAIEADKTFHEEYK---VKKKVKLLP 374 (518)
Q Consensus 316 ~~~r~V~iD~GAn~~g~sv~~~F~~~YP~~~~~f~V~afE~np~~~~~~~---~~~~V~~~~ 374 (518)
++++.-++|+|++ .|. ++..+.+.++ +|+++|.+|...+..+ ...+|+++.
T Consensus 54 ~~~~~~vLD~GcG-~G~-~~~~la~~~~------~v~gvD~s~~~~~~a~~~~~~~~~~~~~ 107 (245)
T 3ggd_A 54 FNPELPLIDFACG-NGT-QTKFLSQFFP------RVIGLDVSKSALEIAAKENTAANISYRL 107 (245)
T ss_dssp SCTTSCEEEETCT-TSH-HHHHHHHHSS------CEEEEESCHHHHHHHHHHSCCTTEEEEE
T ss_pred cCCCCeEEEEcCC-CCH-HHHHHHHhCC------CEEEEECCHHHHHHHHHhCcccCceEEE
Confidence 3566679999999 475 5467777776 5999999998654332 234566554
No 475
>3ofk_A Nodulation protein S; NODS, N-methyltransferase, SAH, SAM, NOD factor, fixation, symbiosis, alpha/beta structure; HET: SAH; 1.85A {Bradyrhizobium SP} PDB: 3ofj_A*
Probab=41.56 E-value=31 Score=31.09 Aligned_cols=52 Identities=8% Similarity=-0.034 Sum_probs=35.4
Q ss_pred cCCceEEEEeCCCCCCcchhhhhhhhCCCCCcceEEEEEcCCccchHh----hccCCceEEEee
Q 010086 316 FKNRYVYVDVGARSYGSSIGSWFKKQYPKQNKTFDVYAIEADKTFHEE----YKVKKKVKLLPY 375 (518)
Q Consensus 316 ~~~r~V~iD~GAn~~g~sv~~~F~~~YP~~~~~f~V~afE~np~~~~~----~~~~~~V~~~~~ 375 (518)
..+..-++|+|++ .|. ++..+.+.. .+|+++|.++...+. +...++|+++..
T Consensus 49 ~~~~~~vLDiGcG-~G~-~~~~l~~~~------~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~ 104 (216)
T 3ofk_A 49 SGAVSNGLEIGCA-AGA-FTEKLAPHC------KRLTVIDVMPRAIGRACQRTKRWSHISWAAT 104 (216)
T ss_dssp TSSEEEEEEECCT-TSH-HHHHHGGGE------EEEEEEESCHHHHHHHHHHTTTCSSEEEEEC
T ss_pred cCCCCcEEEEcCC-CCH-HHHHHHHcC------CEEEEEECCHHHHHHHHHhcccCCCeEEEEc
Confidence 4567889999999 475 445665542 489999999986543 334456776654
No 476
>1kpg_A CFA synthase;, cyclopropane-fatty-acyl-phospholipid synthase 1; mixed alpha beta fold, structural genomics, PSI; HET: SAH 16A; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kp9_A* 1kph_A* 1tpy_A* 1l1e_A*
Probab=41.28 E-value=24 Score=33.59 Aligned_cols=53 Identities=15% Similarity=0.216 Sum_probs=36.1
Q ss_pred cCCceEEEEeCCCCCCcchhhhhhhhCCCCCcceEEEEEcCCccchHh----hcc---CCceEEEee
Q 010086 316 FKNRYVYVDVGARSYGSSIGSWFKKQYPKQNKTFDVYAIEADKTFHEE----YKV---KKKVKLLPY 375 (518)
Q Consensus 316 ~~~r~V~iD~GAn~~g~sv~~~F~~~YP~~~~~f~V~afE~np~~~~~----~~~---~~~V~~~~~ 375 (518)
++++.-++|+|++ .|. ++..+.+.++. +|+++|.+|...+. +.. .++|+++..
T Consensus 62 ~~~~~~vLDiGcG-~G~-~~~~l~~~~~~-----~v~gvd~s~~~~~~a~~~~~~~~~~~~~~~~~~ 121 (287)
T 1kpg_A 62 LQPGMTLLDVGCG-WGA-TMMRAVEKYDV-----NVVGLTLSKNQANHVQQLVANSENLRSKRVLLA 121 (287)
T ss_dssp CCTTCEEEEETCT-TSH-HHHHHHHHHCC-----EEEEEESCHHHHHHHHHHHHTCCCCSCEEEEES
T ss_pred CCCcCEEEEECCc-ccH-HHHHHHHHcCC-----EEEEEECCHHHHHHHHHHHHhcCCCCCeEEEEC
Confidence 4567789999999 475 44667766764 79999999986443 221 246766553
No 477
>3gu3_A Methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; HET: SAH; 2.30A {Bacillus cereus} SCOP: c.66.1.49 PDB: 2gh1_A
Probab=41.21 E-value=37 Score=32.46 Aligned_cols=55 Identities=20% Similarity=0.324 Sum_probs=37.8
Q ss_pred cCCceEEEEeCCCCCCcchhhhhhhhCCCCCcceEEEEEcCCccchHh----hcc-CCceEEEee
Q 010086 316 FKNRYVYVDVGARSYGSSIGSWFKKQYPKQNKTFDVYAIEADKTFHEE----YKV-KKKVKLLPY 375 (518)
Q Consensus 316 ~~~r~V~iD~GAn~~g~sv~~~F~~~YP~~~~~f~V~afE~np~~~~~----~~~-~~~V~~~~~ 375 (518)
+.+..-++|+|++ .|. ++..+.+.+|. +.+|+++|.+|...+. +.. .++|+++..
T Consensus 20 ~~~~~~vLDiGcG-~G~-~~~~l~~~~~~---~~~v~gvD~s~~~~~~a~~~~~~~~~~v~~~~~ 79 (284)
T 3gu3_A 20 ITKPVHIVDYGCG-YGY-LGLVLMPLLPE---GSKYTGIDSGETLLAEARELFRLLPYDSEFLEG 79 (284)
T ss_dssp CCSCCEEEEETCT-TTH-HHHHHTTTSCT---TCEEEEEESCHHHHHHHHHHHHSSSSEEEEEES
T ss_pred cCCCCeEEEecCC-CCH-HHHHHHHhCCC---CCEEEEEECCHHHHHHHHHHHHhcCCceEEEEc
Confidence 3467789999999 485 55778888884 2489999999986432 222 236766654
No 478
>1qyr_A KSGA, high level kasugamycin resistance protein, S-adenosylMet; adenosine dimethyltransferase, rRNA modification, transferase, translation; 2.10A {Escherichia coli} SCOP: c.66.1.24 PDB: 4adv_V 3tpz_A
Probab=41.13 E-value=22 Score=34.29 Aligned_cols=52 Identities=12% Similarity=0.128 Sum_probs=34.9
Q ss_pred cCCceEEEEeCCCCCCcchhhhhhhhCCCCCcceEEEEEcCCccchHhhcc----CCceEEEee
Q 010086 316 FKNRYVYVDVGARSYGSSIGSWFKKQYPKQNKTFDVYAIEADKTFHEEYKV----KKKVKLLPY 375 (518)
Q Consensus 316 ~~~r~V~iD~GAn~~g~sv~~~F~~~YP~~~~~f~V~afE~np~~~~~~~~----~~~V~~~~~ 375 (518)
.+++..++|+|+| .|. ++. + +..+. .+|+++|.||.+.+..+. .++++++..
T Consensus 19 ~~~~~~VLEIG~G-~G~-lt~-l-~~~~~----~~v~avEid~~~~~~a~~~~~~~~~v~~i~~ 74 (252)
T 1qyr_A 19 PQKGQAMVEIGPG-LAA-LTE-P-VGERL----DQLTVIELDRDLAARLQTHPFLGPKLTIYQQ 74 (252)
T ss_dssp CCTTCCEEEECCT-TTT-THH-H-HHTTC----SCEEEECCCHHHHHHHHTCTTTGGGEEEECS
T ss_pred CCCcCEEEEECCC-CcH-HHH-h-hhCCC----CeEEEEECCHHHHHHHHHHhccCCceEEEEC
Confidence 3567789999999 485 645 4 43321 139999999998665432 257777764
No 479
>1wy7_A Hypothetical protein PH1948; seven-stranded beta sheet, methyltransferase fold, structura genomics, transferase; HET: SAH; 2.20A {Pyrococcus horikoshii} SCOP: c.66.1.32
Probab=40.97 E-value=31 Score=30.93 Aligned_cols=52 Identities=25% Similarity=0.140 Sum_probs=33.3
Q ss_pred CCceEEEEeCCCCCCcchhhhhhhhCCCCCcceEEEEEcCCccchHhhc----cCC-ceEEEee
Q 010086 317 KNRYVYVDVGARSYGSSIGSWFKKQYPKQNKTFDVYAIEADKTFHEEYK----VKK-KVKLLPY 375 (518)
Q Consensus 317 ~~r~V~iD~GAn~~g~sv~~~F~~~YP~~~~~f~V~afE~np~~~~~~~----~~~-~V~~~~~ 375 (518)
.++..++|+|++ .|. ++..+.+..+. +|+++|.||...+... ... +++++..
T Consensus 48 ~~~~~vlD~g~G-~G~-~~~~l~~~~~~-----~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~ 104 (207)
T 1wy7_A 48 IEGKVVADLGAG-TGV-LSYGALLLGAK-----EVICVEVDKEAVDVLIENLGEFKGKFKVFIG 104 (207)
T ss_dssp STTCEEEEETCT-TCH-HHHHHHHTTCS-----EEEEEESCHHHHHHHHHHTGGGTTSEEEEES
T ss_pred CCcCEEEEeeCC-CCH-HHHHHHHcCCC-----EEEEEECCHHHHHHHHHHHHHcCCCEEEEEC
Confidence 356789999999 475 54455544221 7999999998654322 111 6776664
No 480
>3kkz_A Uncharacterized protein Q5LES9; putative methyltransferase, BFR250, NESG, structural genomics, PSI-2; HET: SAM; 1.68A {Bacteroides fragilis nctc 9343} PDB: 3e7p_A 3t7s_A* 3t7r_A* 3t7t_A*
Probab=40.62 E-value=27 Score=32.89 Aligned_cols=53 Identities=11% Similarity=0.181 Sum_probs=35.4
Q ss_pred cCCceEEEEeCCCCCCcchhhhhhhhCCCCCcceEEEEEcCCccchHhh----c---cCCceEEEee
Q 010086 316 FKNRYVYVDVGARSYGSSIGSWFKKQYPKQNKTFDVYAIEADKTFHEEY----K---VKKKVKLLPY 375 (518)
Q Consensus 316 ~~~r~V~iD~GAn~~g~sv~~~F~~~YP~~~~~f~V~afE~np~~~~~~----~---~~~~V~~~~~ 375 (518)
++++.-++|+|+| -|. ++..+.+. |. .+|+++|++|...+.. . ..++|+++..
T Consensus 44 ~~~~~~vLDiGcG-~G~-~~~~la~~-~~----~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~ 103 (267)
T 3kkz_A 44 LTEKSLIADIGCG-TGG-QTMVLAGH-VT----GQVTGLDFLSGFIDIFNRNARQSGLQNRVTGIVG 103 (267)
T ss_dssp CCTTCEEEEETCT-TCH-HHHHHHTT-CS----SEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEEC
T ss_pred CCCCCEEEEeCCC-CCH-HHHHHHhc-cC----CEEEEEeCCHHHHHHHHHHHHHcCCCcCcEEEEc
Confidence 4567889999999 475 44566655 43 2899999999864432 2 1245776664
No 481
>3reo_A (ISO)eugenol O-methyltransferase; directed evolution, saturation mutagenesis, regioselectivity transferase; HET: SAH EUG; 1.90A {Clarkia breweri} PDB: 3tky_A* 1kyz_A* 1kyw_A*
Probab=40.34 E-value=29 Score=34.90 Aligned_cols=52 Identities=21% Similarity=0.317 Sum_probs=37.1
Q ss_pred cCCceEEEEeCCCCCCcchhhhhhhhCCCCCcceEEEEEcCCccchHhhccCCceEEEe
Q 010086 316 FKNRYVYVDVGARSYGSSIGSWFKKQYPKQNKTFDVYAIEADKTFHEEYKVKKKVKLLP 374 (518)
Q Consensus 316 ~~~r~V~iD~GAn~~g~sv~~~F~~~YP~~~~~f~V~afE~np~~~~~~~~~~~V~~~~ 374 (518)
+.+..-++|+|++ .|. ++..+.+.||.- +++.+|. |...+.-...++|+++.
T Consensus 201 ~~~~~~vlDvG~G-~G~-~~~~l~~~~p~~----~~~~~D~-~~~~~~a~~~~~v~~~~ 252 (368)
T 3reo_A 201 FEGLTTIVDVGGG-TGA-VASMIVAKYPSI----NAINFDL-PHVIQDAPAFSGVEHLG 252 (368)
T ss_dssp TTTCSEEEEETCT-TSH-HHHHHHHHCTTC----EEEEEEC-HHHHTTCCCCTTEEEEE
T ss_pred ccCCCEEEEeCCC-cCH-HHHHHHHhCCCC----EEEEEeh-HHHHHhhhhcCCCEEEe
Confidence 4456789999999 486 447888899954 7899998 76554444446666655
No 482
>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}
Probab=40.29 E-value=11 Score=39.35 Aligned_cols=88 Identities=14% Similarity=0.165 Sum_probs=50.4
Q ss_pred CCCeEEEEcCCC-CHhH-HHHHhcCCCcEEEEecCCCCCcEE-e--ccCCCCC------------CCC------------
Q 010086 116 QSAKSLCVETQY-GQDV-FALKEIGVEDSIGIFKKSSKPLVI-S--GEGHRIP------------FDG------------ 166 (518)
Q Consensus 116 ~~~rvLDVGcGt-G~~~-~~L~~~g~~~v~gID~s~~~~l~~-~--~da~~LP------------f~D------------ 166 (518)
++.+|+-+|+|. |..+ ..+...| .+|++.|.++...... . ++...++ |..
T Consensus 189 ~~~kV~ViG~G~iG~~aa~~a~~lG-a~V~v~D~~~~~l~~~~~~G~~~~~~~~~~~~d~~~~~~ya~e~s~~~~~~~~~ 267 (405)
T 4dio_A 189 PAAKIFVMGAGVAGLQAIATARRLG-AVVSATDVRPAAKEQVASLGAKFIAVEDEEFKAAETAGGYAKEMSGEYQVKQAA 267 (405)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTT-CEEEEECSSTTHHHHHHHTTCEECCCCC-----------------CHHHHHHHH
T ss_pred CCCEEEEECCcHHHHHHHHHHHHCC-CEEEEEcCCHHHHHHHHHcCCceeecccccccccccccchhhhcchhhhhhhHh
Confidence 568999999997 6554 4445578 5899999875310000 0 0001111 111
Q ss_pred ------CceeEEEEcCceeeccCChHHHHHHHHhcccCCcEEEEE
Q 010086 167 ------NTFDFVFVGGARLEKASKPLDFASEIVRTLKPEGFAVVH 205 (518)
Q Consensus 167 ------~SFD~V~s~~~~l~~~~dp~~~l~Ei~RVLKPGG~lvi~ 205 (518)
...|+|+.... ..--..|.-+-+|+.+.+|||.+++-.
T Consensus 268 ~l~e~l~~aDVVI~tvl-ipg~~ap~Lvt~emv~~Mk~GsVIVDv 311 (405)
T 4dio_A 268 LVAEHIAKQDIVITTAL-IPGRPAPRLVTREMLDSMKPGSVVVDL 311 (405)
T ss_dssp HHHHHHHTCSEEEECCC-CSSSCCCCCBCHHHHTTSCTTCEEEET
T ss_pred HHHHHhcCCCEEEECCc-CCCCCCCEEecHHHHhcCCCCCEEEEE
Confidence 35799987531 121122333457999999999887764
No 483
>3tka_A Ribosomal RNA small subunit methyltransferase H; HET: SAM CTN PG4; 2.25A {Escherichia coli}
Probab=40.28 E-value=17 Score=37.15 Aligned_cols=55 Identities=15% Similarity=0.129 Sum_probs=36.1
Q ss_pred ccCCceEEEEeCCCCCCcchhhhhhhh-CCCCCcceEEEEEcCCccchHhhc--cCCceEEEee
Q 010086 315 SFKNRYVYVDVGARSYGSSIGSWFKKQ-YPKQNKTFDVYAIEADKTFHEEYK--VKKKVKLLPY 375 (518)
Q Consensus 315 s~~~r~V~iD~GAn~~g~sv~~~F~~~-YP~~~~~f~V~afE~np~~~~~~~--~~~~V~~~~~ 375 (518)
..+|+.+||||..|. |. -+..+.+. .|.. .||+||-||...+.-. ...+|+++..
T Consensus 54 ~i~pggiyVD~TlG~-GG-HS~~iL~~lg~~G----rVig~D~Dp~Al~~A~rL~~~Rv~lv~~ 111 (347)
T 3tka_A 54 NIRPDGIYIDGTFGR-GG-HSRLILSQLGEEG----RLLAIDRDPQAIAVAKTIDDPRFSIIHG 111 (347)
T ss_dssp CCCTTCEEEESCCTT-SH-HHHHHHTTCCTTC----EEEEEESCHHHHHHHTTCCCTTEEEEES
T ss_pred CCCCCCEEEEeCcCC-CH-HHHHHHHhCCCCC----EEEEEECCHHHHHHHHhhcCCcEEEEeC
Confidence 457899999999884 43 32345554 4644 7999999998644211 2356777754
No 484
>3l8d_A Methyltransferase; structural genomics, PSI, nysgrc, protein structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Bacillus thuringiensis}
Probab=40.27 E-value=35 Score=31.20 Aligned_cols=50 Identities=12% Similarity=0.176 Sum_probs=33.9
Q ss_pred CCceEEEEeCCCCCCcchhhhhhhhCCCCCcceEEEEEcCCccchHhhcc---CCceEEEe
Q 010086 317 KNRYVYVDVGARSYGSSIGSWFKKQYPKQNKTFDVYAIEADKTFHEEYKV---KKKVKLLP 374 (518)
Q Consensus 317 ~~r~V~iD~GAn~~g~sv~~~F~~~YP~~~~~f~V~afE~np~~~~~~~~---~~~V~~~~ 374 (518)
+++.-++|+|++ .|. ++..+.+. +.+|+++|++|...+.... .++++++.
T Consensus 52 ~~~~~vLDiG~G-~G~-~~~~l~~~------~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~ 104 (242)
T 3l8d_A 52 KKEAEVLDVGCG-DGY-GTYKLSRT------GYKAVGVDISEVMIQKGKERGEGPDLSFIK 104 (242)
T ss_dssp CTTCEEEEETCT-TSH-HHHHHHHT------TCEEEEEESCHHHHHHHHTTTCBTTEEEEE
T ss_pred CCCCeEEEEcCC-CCH-HHHHHHHc------CCeEEEEECCHHHHHHHHhhcccCCceEEE
Confidence 356789999999 475 44566553 2389999999987654432 35666555
No 485
>3duw_A OMT, O-methyltransferase, putative; alternating of alpha and beta with complex SAH; HET: SAH; 1.20A {Bacillus cereus} PDB: 3dul_A*
Probab=40.15 E-value=22 Score=32.43 Aligned_cols=41 Identities=15% Similarity=0.262 Sum_probs=31.1
Q ss_pred CCceEEEEeCCCCCCcchhhhhhhhCCCCCcceEEEEEcCCccchH
Q 010086 317 KNRYVYVDVGARSYGSSIGSWFKKQYPKQNKTFDVYAIEADKTFHE 362 (518)
Q Consensus 317 ~~r~V~iD~GAn~~g~sv~~~F~~~YP~~~~~f~V~afE~np~~~~ 362 (518)
.+...++|+|++ .|. .+.++.+.+|.+ .+|+++|.+|...+
T Consensus 57 ~~~~~vLdiG~G-~G~-~~~~la~~~~~~---~~v~~vD~~~~~~~ 97 (223)
T 3duw_A 57 QGARNILEIGTL-GGY-STIWLARGLSSG---GRVVTLEASEKHAD 97 (223)
T ss_dssp HTCSEEEEECCT-TSH-HHHHHHTTCCSS---CEEEEEESCHHHHH
T ss_pred hCCCEEEEecCC-ccH-HHHHHHHhCCCC---CEEEEEECCHHHHH
Confidence 456788999999 486 447888888732 38999999997643
No 486
>2esr_A Methyltransferase; structural genomics, hypothetical protein, streptococcus PYO PSI, protein structure initiative; HET: GLC; 1.80A {Streptococcus pyogenes} SCOP: c.66.1.46
Probab=39.86 E-value=28 Score=30.35 Aligned_cols=39 Identities=13% Similarity=0.017 Sum_probs=27.4
Q ss_pred CCceEEEEeCCCCCCcchhhhhhhhCCCCCcceEEEEEcCCccchH
Q 010086 317 KNRYVYVDVGARSYGSSIGSWFKKQYPKQNKTFDVYAIEADKTFHE 362 (518)
Q Consensus 317 ~~r~V~iD~GAn~~g~sv~~~F~~~YP~~~~~f~V~afE~np~~~~ 362 (518)
.+...++|+|++ .|. ++..+.+. +.. +|+++|.|+...+
T Consensus 30 ~~~~~vLDlGcG-~G~-~~~~l~~~-~~~----~v~~vD~~~~~~~ 68 (177)
T 2esr_A 30 FNGGRVLDLFAG-SGG-LAIEAVSR-GMS----AAVLVEKNRKAQA 68 (177)
T ss_dssp CCSCEEEEETCT-TCH-HHHHHHHT-TCC----EEEEECCCHHHHH
T ss_pred cCCCeEEEeCCC-CCH-HHHHHHHc-CCC----EEEEEECCHHHHH
Confidence 356689999999 475 43455544 432 8999999998654
No 487
>1yub_A Ermam, rRNA methyltransferase; MLS antibiotics; NMR {Streptococcus pneumoniae} SCOP: c.66.1.24
Probab=39.73 E-value=21 Score=33.64 Aligned_cols=52 Identities=19% Similarity=0.259 Sum_probs=34.7
Q ss_pred cCCceEEEEeCCCCCCcchhhhhhhhCCCCCcceEEEEEcCCccchHhhc----cCCceEEEee
Q 010086 316 FKNRYVYVDVGARSYGSSIGSWFKKQYPKQNKTFDVYAIEADKTFHEEYK----VKKKVKLLPY 375 (518)
Q Consensus 316 ~~~r~V~iD~GAn~~g~sv~~~F~~~YP~~~~~f~V~afE~np~~~~~~~----~~~~V~~~~~ 375 (518)
.+++..++|+|+| .|. ++..+.+.. .+|+++|.|+...+... ..++|+++..
T Consensus 27 ~~~~~~VLDiG~G-~G~-~~~~l~~~~------~~v~~id~~~~~~~~a~~~~~~~~~v~~~~~ 82 (245)
T 1yub_A 27 LKETDTVYEIGTG-KGH-LTTKLAKIS------KQVTSIELDSHLFNLSSEKLKLNTRVTLIHQ 82 (245)
T ss_dssp CCSSEEEEECSCC-CSS-CSHHHHHHS------SEEEESSSSCSSSSSSSCTTTTCSEEEECCS
T ss_pred CCCCCEEEEEeCC-CCH-HHHHHHHhC------CeEEEEECCHHHHHHHHHHhccCCceEEEEC
Confidence 3567889999999 475 545666543 27999999998654332 2345666553
No 488
>1ej0_A FTSJ; methyltransferase, adoMet, adenosyl methionine, heat shock proteins, 23S ribosomal RNA; HET: SAM; 1.50A {Escherichia coli} SCOP: c.66.1.2 PDB: 1eiz_A*
Probab=39.49 E-value=27 Score=29.68 Aligned_cols=47 Identities=23% Similarity=0.229 Sum_probs=32.1
Q ss_pred CCceEEEEeCCCCCCcchhhhhhhhC-CCCCcceEEEEEcCCccchHhhccCCceEEEe
Q 010086 317 KNRYVYVDVGARSYGSSIGSWFKKQY-PKQNKTFDVYAIEADKTFHEEYKVKKKVKLLP 374 (518)
Q Consensus 317 ~~r~V~iD~GAn~~g~sv~~~F~~~Y-P~~~~~f~V~afE~np~~~~~~~~~~~V~~~~ 374 (518)
+++..++|+|++. |. ++.++.+.+ |. .+|+++|.++ ..+ .++++++.
T Consensus 21 ~~~~~vLd~G~G~-G~-~~~~l~~~~~~~----~~v~~~D~~~-~~~----~~~~~~~~ 68 (180)
T 1ej0_A 21 KPGMTVVDLGAAP-GG-WSQYVVTQIGGK----GRIIACDLLP-MDP----IVGVDFLQ 68 (180)
T ss_dssp CTTCEEEEESCTT-CH-HHHHHHHHHCTT----CEEEEEESSC-CCC----CTTEEEEE
T ss_pred CCCCeEEEeCCCC-CH-HHHHHHHHhCCC----CeEEEEECcc-ccc----cCcEEEEE
Confidence 4667899999994 75 446777765 42 3899999999 432 24555544
No 489
>1fp2_A Isoflavone O-methyltransferase; protein-product complex; HET: SAH HMO; 1.40A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpx_A* 2qyo_A*
Probab=39.28 E-value=28 Score=34.57 Aligned_cols=51 Identities=16% Similarity=0.234 Sum_probs=35.4
Q ss_pred CCceEEEEeCCCCCCcchhhhhhhhCCCCCcceEEEEEcCCccchHhhccCCceEEEe
Q 010086 317 KNRYVYVDVGARSYGSSIGSWFKKQYPKQNKTFDVYAIEADKTFHEEYKVKKKVKLLP 374 (518)
Q Consensus 317 ~~r~V~iD~GAn~~g~sv~~~F~~~YP~~~~~f~V~afE~np~~~~~~~~~~~V~~~~ 374 (518)
.+..-++|+|++ .|. .+..+.+.||.. +++++|. |...+.-+..++|+++.
T Consensus 187 ~~~~~vlDvG~G-~G~-~~~~l~~~~p~~----~~~~~D~-~~~~~~a~~~~~v~~~~ 237 (352)
T 1fp2_A 187 DGLESIVDVGGG-TGT-TAKIICETFPKL----KCIVFDR-PQVVENLSGSNNLTYVG 237 (352)
T ss_dssp TTCSEEEEETCT-TSH-HHHHHHHHCTTC----EEEEEEC-HHHHTTCCCBTTEEEEE
T ss_pred ccCceEEEeCCC-ccH-HHHHHHHHCCCC----eEEEeeC-HHHHhhcccCCCcEEEe
Confidence 345679999999 485 447888889843 7999999 77654333345555554
No 490
>3f4k_A Putative methyltransferase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacteroides thetaiotaomicron} PDB: 3t0i_A* 3svz_A* 3sxj_A*
Probab=39.27 E-value=26 Score=32.52 Aligned_cols=40 Identities=15% Similarity=0.218 Sum_probs=31.5
Q ss_pred cCCceEEEEeCCCCCCcchhhhhhhhCCCCCcceEEEEEcCCccchH
Q 010086 316 FKNRYVYVDVGARSYGSSIGSWFKKQYPKQNKTFDVYAIEADKTFHE 362 (518)
Q Consensus 316 ~~~r~V~iD~GAn~~g~sv~~~F~~~YP~~~~~f~V~afE~np~~~~ 362 (518)
++++.-++|+|++ .|. ++..+.+.+|. +|+++|.+|...+
T Consensus 44 ~~~~~~vLDiG~G-~G~-~~~~l~~~~~~-----~v~~vD~s~~~~~ 83 (257)
T 3f4k_A 44 LTDDAKIADIGCG-TGG-QTLFLADYVKG-----QITGIDLFPDFIE 83 (257)
T ss_dssp CCTTCEEEEETCT-TSH-HHHHHHHHCCS-----EEEEEESCHHHHH
T ss_pred CCCCCeEEEeCCC-CCH-HHHHHHHhCCC-----eEEEEECCHHHHH
Confidence 4566789999999 485 55788888874 7999999998654
No 491
>3hp7_A Hemolysin, putative; structural genomics, APC64019, PSI-2, protein STR initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.53A {Streptococcus thermophilus}
Probab=39.05 E-value=37 Score=33.67 Aligned_cols=48 Identities=17% Similarity=0.340 Sum_probs=32.2
Q ss_pred CceEEEEeCCCCCCcchhhhhhhhCCCCCcceEEEEEcCCccchH-hhccCCceEE
Q 010086 318 NRYVYVDVGARSYGSSIGSWFKKQYPKQNKTFDVYAIEADKTFHE-EYKVKKKVKL 372 (518)
Q Consensus 318 ~r~V~iD~GAn~~g~sv~~~F~~~YP~~~~~f~V~afE~np~~~~-~~~~~~~V~~ 372 (518)
++..++|+|++. |. ++.++.+. +.. +||++|.++.... .....+++..
T Consensus 85 ~g~~vLDiGcGT-G~-~t~~L~~~-ga~----~V~aVDvs~~mL~~a~r~~~rv~~ 133 (291)
T 3hp7_A 85 EDMITIDIGAST-GG-FTDVMLQN-GAK----LVYAVDVGTNQLVWKLRQDDRVRS 133 (291)
T ss_dssp TTCEEEEETCTT-SH-HHHHHHHT-TCS----EEEEECSSSSCSCHHHHTCTTEEE
T ss_pred cccEEEecCCCc-cH-HHHHHHhC-CCC----EEEEEECCHHHHHHHHHhCcccce
Confidence 467899999984 74 55566654 322 7999999997543 3455555543
No 492
>3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti}
Probab=38.66 E-value=18 Score=35.91 Aligned_cols=82 Identities=10% Similarity=0.069 Sum_probs=45.2
Q ss_pred CCC-CeEEEE-cCCC-CHhHHHHH-hcCCCcEEEEecCCCCCcEE-------eccCCCCCCC--------CCceeEEEEc
Q 010086 115 SQS-AKSLCV-ETQY-GQDVFALK-EIGVEDSIGIFKKSSKPLVI-------SGEGHRIPFD--------GNTFDFVFVG 175 (518)
Q Consensus 115 ~~~-~rvLDV-GcGt-G~~~~~L~-~~g~~~v~gID~s~~~~l~~-------~~da~~LPf~--------D~SFD~V~s~ 175 (518)
+++ ..+|-. |+|. |..+..++ ..| .+|++++.++...... .-+...-.+. ...+|+|+..
T Consensus 162 ~~g~~~vli~gg~g~vG~~a~qla~~~G-a~Vi~~~~~~~~~~~~~~~Ga~~~~~~~~~~~~~~v~~~~~~~g~D~vid~ 240 (349)
T 3pi7_A 162 QEGEKAFVMTAGASQLCKLIIGLAKEEG-FRPIVTVRRDEQIALLKDIGAAHVLNEKAPDFEATLREVMKAEQPRIFLDA 240 (349)
T ss_dssp HHCCSEEEESSTTSHHHHHHHHHHHHHT-CEEEEEESCGGGHHHHHHHTCSEEEETTSTTHHHHHHHHHHHHCCCEEEES
T ss_pred hCCCCEEEEeCCCcHHHHHHHHHHHHCC-CEEEEEeCCHHHHHHHHHcCCCEEEECCcHHHHHHHHHHhcCCCCcEEEEC
Confidence 355 455544 4443 55554443 467 5999999764211000 0011111111 1258999976
Q ss_pred CceeeccCChHHHHHHHHhcccCCcEEEEE
Q 010086 176 GARLEKASKPLDFASEIVRTLKPEGFAVVH 205 (518)
Q Consensus 176 ~~~l~~~~dp~~~l~Ei~RVLKPGG~lvi~ 205 (518)
.. - ..+.++.+.|+|||.+++.
T Consensus 241 ~g-~-------~~~~~~~~~l~~~G~iv~~ 262 (349)
T 3pi7_A 241 VT-G-------PLASAIFNAMPKRARWIIY 262 (349)
T ss_dssp SC-H-------HHHHHHHHHSCTTCEEEEC
T ss_pred CC-C-------hhHHHHHhhhcCCCEEEEE
Confidence 53 1 2357788999999998875
No 493
>3lbf_A Protein-L-isoaspartate O-methyltransferase; modified rossman-type fold, S-adenosyl-L- methionine; HET: SAH; 1.80A {Escherichia coli}
Probab=38.26 E-value=46 Score=29.78 Aligned_cols=52 Identities=13% Similarity=0.082 Sum_probs=35.0
Q ss_pred cCCceEEEEeCCCCCCcchhhhhhhhCCCCCcceEEEEEcCCccchHh----hc--cCCceEEEee
Q 010086 316 FKNRYVYVDVGARSYGSSIGSWFKKQYPKQNKTFDVYAIEADKTFHEE----YK--VKKKVKLLPY 375 (518)
Q Consensus 316 ~~~r~V~iD~GAn~~g~sv~~~F~~~YP~~~~~f~V~afE~np~~~~~----~~--~~~~V~~~~~ 375 (518)
.++...++|+|++ .|. .+..+.+. ..+|+++|.+|...+. +. ..++++++..
T Consensus 75 ~~~~~~vLdiG~G-~G~-~~~~la~~------~~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~ 132 (210)
T 3lbf_A 75 LTPQSRVLEIGTG-SGY-QTAILAHL------VQHVCSVERIKGLQWQARRRLKNLDLHNVSTRHG 132 (210)
T ss_dssp CCTTCEEEEECCT-TSH-HHHHHHHH------SSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEES
T ss_pred CCCCCEEEEEcCC-CCH-HHHHHHHh------CCEEEEEecCHHHHHHHHHHHHHcCCCceEEEEC
Confidence 3567789999999 475 44566655 1389999999986542 22 2346776654
No 494
>3pfg_A N-methyltransferase; N,N-dimethyltransferase, SAM binding, DTDP-linked sugar BIND transferase; HET: SAM TLO; 1.35A {Streptomyces fradiae} PDB: 3pfh_A* 3px3_A* 3px2_A*
Probab=38.19 E-value=34 Score=31.94 Aligned_cols=51 Identities=12% Similarity=0.041 Sum_probs=33.9
Q ss_pred CCceEEEEeCCCCCCcchhhhhhhhCCCCCcceEEEEEcCCccchHhhc-cCCceEEEee
Q 010086 317 KNRYVYVDVGARSYGSSIGSWFKKQYPKQNKTFDVYAIEADKTFHEEYK-VKKKVKLLPY 375 (518)
Q Consensus 317 ~~r~V~iD~GAn~~g~sv~~~F~~~YP~~~~~f~V~afE~np~~~~~~~-~~~~V~~~~~ 375 (518)
.+...++|+|++ .|. ++..+.+..+ +|+++|.+|...+.-+ ..++|+++..
T Consensus 49 ~~~~~vLDiGcG-~G~-~~~~l~~~~~------~v~gvD~s~~~~~~a~~~~~~~~~~~~ 100 (263)
T 3pfg_A 49 PKAASLLDVACG-TGM-HLRHLADSFG------TVEGLELSADMLAIARRRNPDAVLHHG 100 (263)
T ss_dssp TTCCEEEEETCT-TSH-HHHHHTTTSS------EEEEEESCHHHHHHHHHHCTTSEEEEC
T ss_pred CCCCcEEEeCCc-CCH-HHHHHHHcCC------eEEEEECCHHHHHHHHhhCCCCEEEEC
Confidence 345679999999 475 4456655433 7999999998755433 2346666553
No 495
>2y1w_A Histone-arginine methyltransferase CARM1; histone modification; HET: SFG 849; 2.10A {Homo sapiens} PDB: 2y1x_A* 3b3f_A* 3b3g_A 2v74_B* 2v7e_A
Probab=38.07 E-value=19 Score=36.05 Aligned_cols=53 Identities=21% Similarity=0.274 Sum_probs=33.3
Q ss_pred cCCceEEEEeCCCCCCcchhhhhhhhCCCCCcceEEEEEcCCccch---Hhhc--cC-CceEEEee
Q 010086 316 FKNRYVYVDVGARSYGSSIGSWFKKQYPKQNKTFDVYAIEADKTFH---EEYK--VK-KKVKLLPY 375 (518)
Q Consensus 316 ~~~r~V~iD~GAn~~g~sv~~~F~~~YP~~~~~f~V~afE~np~~~---~~~~--~~-~~V~~~~~ 375 (518)
..++..++|+|+|. |. ++.++.+ .+.. +|+++|.++... +..+ +. ++|+++..
T Consensus 48 ~~~~~~VLDiGcGt-G~-ls~~la~-~g~~----~V~~vD~s~~~~~a~~~~~~~~l~~~v~~~~~ 106 (348)
T 2y1w_A 48 DFKDKIVLDVGCGS-GI-LSFFAAQ-AGAR----KIYAVEASTMAQHAEVLVKSNNLTDRIVVIPG 106 (348)
T ss_dssp GTTTCEEEEETCTT-SH-HHHHHHH-TTCS----EEEEEECSTHHHHHHHHHHHTTCTTTEEEEES
T ss_pred cCCcCEEEEcCCCc-cH-HHHHHHh-CCCC----EEEEECCHHHHHHHHHHHHHcCCCCcEEEEEc
Confidence 44678999999994 74 5344444 3432 899999997431 1111 22 57887765
No 496
>4fsd_A Arsenic methyltransferase; rossmann fold; 1.75A {Cyanidioschyzon SP} PDB: 4fr0_A* 4fs8_A 3p7e_A 3qnh_A 3qhu_A
Probab=37.77 E-value=33 Score=34.68 Aligned_cols=41 Identities=15% Similarity=0.022 Sum_probs=30.5
Q ss_pred cCCceEEEEeCCCCCCcchhhhhhhhC-CCCCcceEEEEEcCCccchH
Q 010086 316 FKNRYVYVDVGARSYGSSIGSWFKKQY-PKQNKTFDVYAIEADKTFHE 362 (518)
Q Consensus 316 ~~~r~V~iD~GAn~~g~sv~~~F~~~Y-P~~~~~f~V~afE~np~~~~ 362 (518)
..++.-++|+|++. |. ++..+.+.+ |. .+|+++|.+|...+
T Consensus 81 ~~~~~~VLDlGcG~-G~-~~~~la~~~~~~----~~v~gvD~s~~~l~ 122 (383)
T 4fsd_A 81 SLEGATVLDLGCGT-GR-DVYLASKLVGEH----GKVIGVDMLDNQLE 122 (383)
T ss_dssp GGTTCEEEEESCTT-SH-HHHHHHHHHTTT----CEEEEEECCHHHHH
T ss_pred CCCCCEEEEecCcc-CH-HHHHHHHHhCCC----CEEEEEECCHHHHH
Confidence 45678899999994 75 445677666 43 38999999998644
No 497
>2hnk_A SAM-dependent O-methyltransferase; modified rossman fold; HET: SAH; 2.30A {Leptospira interrogans}
Probab=37.76 E-value=27 Score=32.45 Aligned_cols=41 Identities=10% Similarity=0.237 Sum_probs=30.9
Q ss_pred CCceEEEEeCCCCCCcchhhhhhhhCCCCCcceEEEEEcCCccchH
Q 010086 317 KNRYVYVDVGARSYGSSIGSWFKKQYPKQNKTFDVYAIEADKTFHE 362 (518)
Q Consensus 317 ~~r~V~iD~GAn~~g~sv~~~F~~~YP~~~~~f~V~afE~np~~~~ 362 (518)
.+...++|+|++ .|. .+.++.+.+|.. .+|+++|.+|...+
T Consensus 59 ~~~~~VLdiG~G-~G~-~~~~la~~~~~~---~~v~~vD~~~~~~~ 99 (239)
T 2hnk_A 59 SGAKRIIEIGTF-TGY-SSLCFASALPED---GKILCCDVSEEWTN 99 (239)
T ss_dssp HTCSEEEEECCT-TCH-HHHHHHHHSCTT---CEEEEEESCHHHHH
T ss_pred hCcCEEEEEeCC-CCH-HHHHHHHhCCCC---CEEEEEECCHHHHH
Confidence 456778999999 486 446888888732 38999999998643
No 498
>2b25_A Hypothetical protein; structural genomics, methyl transferase, SAM, structural GEN consortium, SGC, transferase; HET: SAM; 2.50A {Homo sapiens} SCOP: c.66.1.13
Probab=37.52 E-value=29 Score=34.24 Aligned_cols=41 Identities=20% Similarity=0.371 Sum_probs=30.0
Q ss_pred cCCceEEEEeCCCCCCcchhhhhhhhC-CCCCcceEEEEEcCCccchH
Q 010086 316 FKNRYVYVDVGARSYGSSIGSWFKKQY-PKQNKTFDVYAIEADKTFHE 362 (518)
Q Consensus 316 ~~~r~V~iD~GAn~~g~sv~~~F~~~Y-P~~~~~f~V~afE~np~~~~ 362 (518)
.+++..++|+|++. |. ++..+.+.+ |.. +|+++|.+|...+
T Consensus 103 ~~~g~~VLDiG~G~-G~-~~~~la~~~g~~~----~v~~vD~~~~~~~ 144 (336)
T 2b25_A 103 INPGDTVLEAGSGS-GG-MSLFLSKAVGSQG----RVISFEVRKDHHD 144 (336)
T ss_dssp CCTTCEEEEECCTT-SH-HHHHHHHHHCTTC----EEEEEESSHHHHH
T ss_pred CCCCCEEEEeCCCc-CH-HHHHHHHHhCCCc----eEEEEeCCHHHHH
Confidence 45778899999994 74 545666654 532 8999999998643
No 499
>4gek_A TRNA (CMO5U34)-methyltransferase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, rossmann fold; HET: GEK; 1.50A {Escherichia coli} PDB: 1im8_A*
Probab=37.41 E-value=45 Score=31.96 Aligned_cols=56 Identities=14% Similarity=0.205 Sum_probs=37.5
Q ss_pred cCCceEEEEeCCCCCCcchhhhhhhhCCCCCcceEEEEEcCCccchHh----h---ccCCceEEEee
Q 010086 316 FKNRYVYVDVGARSYGSSIGSWFKKQYPKQNKTFDVYAIEADKTFHEE----Y---KVKKKVKLLPY 375 (518)
Q Consensus 316 ~~~r~V~iD~GAn~~g~sv~~~F~~~YP~~~~~f~V~afE~np~~~~~----~---~~~~~V~~~~~ 375 (518)
++++.-++|+|++ -|. .+..+.+.++. .+++|+++|.+|...+. . ....+|+++..
T Consensus 68 ~~~~~~vLDlGcG-tG~-~~~~la~~~~~--~~~~v~gvD~s~~ml~~A~~~~~~~~~~~~v~~~~~ 130 (261)
T 4gek_A 68 VQPGTQVYDLGCS-LGA-ATLSVRRNIHH--DNCKIIAIDNSPAMIERCRRHIDAYKAPTPVDVIEG 130 (261)
T ss_dssp CCTTCEEEEETCT-TTH-HHHHHHHTCCS--SSCEEEEEESCHHHHHHHHHHHHTSCCSSCEEEEES
T ss_pred CCCCCEEEEEeCC-CCH-HHHHHHHhcCC--CCCEEEEEECCHHHHHHHHHHHHhhccCceEEEeec
Confidence 5678889999998 475 43456666543 34689999999986432 2 22346776653
No 500
>3p9c_A Caffeic acid O-methyltransferase; S-adenosylmethionine dependent O-methyltransferase; HET: SAH; 1.80A {Lolium perenne} PDB: 3p9i_A* 3p9k_A*
Probab=37.12 E-value=35 Score=34.28 Aligned_cols=53 Identities=19% Similarity=0.145 Sum_probs=37.2
Q ss_pred cCCceEEEEeCCCCCCcchhhhhhhhCCCCCcceEEEEEcCCccchHhhccCCceEEEee
Q 010086 316 FKNRYVYVDVGARSYGSSIGSWFKKQYPKQNKTFDVYAIEADKTFHEEYKVKKKVKLLPY 375 (518)
Q Consensus 316 ~~~r~V~iD~GAn~~g~sv~~~F~~~YP~~~~~f~V~afE~np~~~~~~~~~~~V~~~~~ 375 (518)
+.+...++|+|++ .|. ++..+.+.||.- ++..+|. |...+.-...++|+++..
T Consensus 199 ~~~~~~vlDvG~G-~G~-~~~~l~~~~p~~----~~~~~D~-~~~~~~a~~~~~v~~~~~ 251 (364)
T 3p9c_A 199 FEGLGTLVDVGGG-VGA-TVAAIAAHYPTI----KGVNFDL-PHVISEAPQFPGVTHVGG 251 (364)
T ss_dssp TTTCSEEEEETCT-TSH-HHHHHHHHCTTC----EEEEEEC-HHHHTTCCCCTTEEEEEC
T ss_pred ccCCCEEEEeCCC-CCH-HHHHHHHHCCCC----eEEEecC-HHHHHhhhhcCCeEEEeC
Confidence 4567789999999 486 447888899953 7899998 665443334456666553
Done!