Query 010093
Match_columns 518
No_of_seqs 133 out of 1268
Neff 9.6
Searched_HMMs 29240
Date Mon Mar 25 19:45:02 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/010093.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/010093hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3hbf_A Flavonoid 3-O-glucosylt 100.0 3.7E-64 1.3E-68 512.5 36.3 437 29-511 8-453 (454)
2 2vch_A Hydroquinone glucosyltr 100.0 3.6E-60 1.2E-64 491.3 42.8 448 33-514 4-471 (480)
3 2pq6_A UDP-glucuronosyl/UDP-gl 100.0 8.9E-60 3.1E-64 489.9 37.1 447 34-512 7-479 (482)
4 2acv_A Triterpene UDP-glucosyl 100.0 3.4E-58 1.1E-62 474.7 39.0 437 34-510 8-461 (463)
5 2c1x_A UDP-glucose flavonoid 3 100.0 3.8E-58 1.3E-62 473.1 36.8 436 33-511 5-451 (456)
6 2iya_A OLEI, oleandomycin glyc 100.0 1.2E-43 4.1E-48 364.0 33.8 403 33-510 10-419 (424)
7 4amg_A Snogd; transferase, pol 100.0 7.8E-44 2.7E-48 362.5 24.1 371 33-510 20-398 (400)
8 1iir_A Glycosyltransferase GTF 100.0 2.5E-40 8.4E-45 338.3 26.8 380 36-511 1-399 (415)
9 3rsc_A CALG2; TDP, enediyne, s 100.0 1.1E-39 3.7E-44 333.6 27.9 368 33-490 18-396 (415)
10 1rrv_A Glycosyltransferase GTF 100.0 2.4E-39 8.2E-44 331.1 26.4 378 36-511 1-400 (416)
11 3ia7_A CALG4; glycosysltransfe 100.0 1.7E-38 5.9E-43 323.1 32.4 366 33-490 2-381 (402)
12 3h4t_A Glycosyltransferase GTF 100.0 2E-38 7E-43 322.7 28.6 367 36-511 1-381 (404)
13 2iyf_A OLED, oleandomycin glyc 100.0 1.1E-37 3.6E-42 320.4 29.7 370 33-490 5-382 (430)
14 2yjn_A ERYCIII, glycosyltransf 100.0 3.6E-38 1.2E-42 324.8 23.4 387 34-511 19-434 (441)
15 2p6p_A Glycosyl transferase; X 100.0 1.4E-37 4.7E-42 314.7 26.6 367 36-516 1-380 (384)
16 4fzr_A SSFS6; structural genom 100.0 4E-35 1.4E-39 298.1 25.2 357 33-490 13-383 (398)
17 3oti_A CALG3; calicheamicin, T 100.0 7.2E-35 2.4E-39 296.2 23.7 361 33-510 18-395 (398)
18 3tsa_A SPNG, NDP-rhamnosyltran 100.0 7.2E-33 2.5E-37 280.7 26.9 366 35-510 1-386 (391)
19 3otg_A CALG1; calicheamicin, T 100.0 8.9E-31 3.1E-35 267.1 31.0 357 33-490 18-391 (412)
20 3s2u_A UDP-N-acetylglucosamine 100.0 2.1E-26 7.3E-31 230.3 26.4 312 36-480 3-329 (365)
21 2o6l_A UDP-glucuronosyltransfe 99.9 4.1E-27 1.4E-31 209.4 15.4 162 300-490 7-169 (170)
22 1f0k_A MURG, UDP-N-acetylgluco 99.8 1.4E-18 4.6E-23 173.7 28.2 342 36-517 7-361 (364)
23 3hbm_A UDP-sugar hydrolase; PS 99.6 2.7E-13 9.4E-18 128.7 22.4 118 313-447 156-275 (282)
24 2jzc_A UDP-N-acetylglucosamine 99.5 2.2E-14 7.7E-19 130.7 8.9 132 312-469 26-196 (224)
25 2gek_A Phosphatidylinositol ma 99.4 3E-10 1E-14 114.5 28.7 340 34-513 19-383 (406)
26 3okp_A GDP-mannose-dependent a 99.4 4.4E-10 1.5E-14 112.7 28.9 349 34-515 3-381 (394)
27 3c48_A Predicted glycosyltrans 99.4 1.6E-09 5.5E-14 110.4 32.5 340 33-471 18-390 (438)
28 1v4v_A UDP-N-acetylglucosamine 99.3 9.3E-11 3.2E-15 117.2 21.3 134 314-481 198-340 (376)
29 3ot5_A UDP-N-acetylglucosamine 99.3 1.8E-10 6.3E-15 116.0 20.7 136 313-481 223-367 (403)
30 3dzc_A UDP-N-acetylglucosamine 99.3 6.2E-11 2.1E-15 119.3 16.8 136 313-481 229-373 (396)
31 3fro_A GLGA glycogen synthase; 99.2 1.9E-08 6.6E-13 102.2 31.0 113 377-513 311-430 (439)
32 1vgv_A UDP-N-acetylglucosamine 99.2 6.6E-10 2.2E-14 111.3 18.4 135 313-480 204-347 (384)
33 2r60_A Glycosyl transferase, g 99.2 3E-08 1E-12 102.9 30.1 167 316-511 263-457 (499)
34 2jjm_A Glycosyl transferase, g 99.1 8.1E-08 2.8E-12 96.3 32.0 349 36-513 16-385 (394)
35 2x6q_A Trehalose-synthase TRET 99.1 2E-08 7E-13 101.6 24.3 111 376-511 292-412 (416)
36 2iw1_A Lipopolysaccharide core 99.1 1E-07 3.6E-12 94.6 27.8 135 315-482 196-344 (374)
37 2iuy_A Avigt4, glycosyltransfe 99.0 6.8E-09 2.3E-13 102.1 18.5 122 317-471 164-307 (342)
38 3beo_A UDP-N-acetylglucosamine 99.0 1.1E-07 3.7E-12 94.6 27.1 135 313-480 204-347 (375)
39 4hwg_A UDP-N-acetylglucosamine 99.0 1.6E-08 5.3E-13 101.0 19.0 316 34-471 8-341 (385)
40 3s28_A Sucrose synthase 1; gly 98.7 8.3E-07 2.8E-11 96.2 22.5 167 316-511 573-767 (816)
41 1rzu_A Glycogen synthase 1; gl 98.7 6.5E-06 2.2E-10 84.8 25.3 158 316-511 292-473 (485)
42 2qzs_A Glycogen synthase; glyc 98.6 3.1E-06 1.1E-10 87.2 21.7 160 316-513 293-476 (485)
43 3oy2_A Glycosyltransferase B73 98.6 1.6E-05 5.4E-10 80.0 26.1 166 315-513 184-390 (413)
44 2vsy_A XCC0866; transferase, g 98.5 9.9E-05 3.4E-09 77.6 29.5 115 377-511 434-557 (568)
45 2f9f_A First mannosyl transfer 98.3 2.5E-06 8.4E-11 75.2 9.8 140 316-486 24-174 (177)
46 2hy7_A Glucuronosyltransferase 98.2 0.00022 7.7E-09 71.5 23.0 73 376-471 264-351 (406)
47 2xci_A KDO-transferase, 3-deox 98.1 0.0007 2.4E-08 67.1 23.6 96 378-488 261-362 (374)
48 2x0d_A WSAF; GT4 family, trans 98.1 9.7E-05 3.3E-09 74.3 17.1 85 376-481 294-385 (413)
49 4gyw_A UDP-N-acetylglucosamine 97.4 0.0024 8.2E-08 68.8 15.6 125 313-444 521-651 (723)
50 3qhp_A Type 1 capsular polysac 97.3 0.0029 1E-07 54.2 12.0 125 315-471 2-139 (166)
51 3tov_A Glycosyl transferase fa 97.2 0.017 5.9E-07 56.3 18.2 105 34-173 7-115 (349)
52 3q3e_A HMW1C-like glycosyltran 97.2 0.0028 9.5E-08 65.8 12.2 146 315-482 441-595 (631)
53 3rhz_A GTF3, nucleotide sugar 96.9 0.002 6.8E-08 62.6 8.1 110 378-509 215-336 (339)
54 1psw_A ADP-heptose LPS heptosy 96.8 0.065 2.2E-06 51.9 18.4 103 36-173 1-106 (348)
55 2bfw_A GLGA glycogen synthase; 96.3 0.063 2.1E-06 47.2 13.4 76 378-471 96-179 (200)
56 2wqk_A 5'-nucleotidase SURE; S 92.4 0.69 2.4E-05 42.3 9.9 115 35-177 1-128 (251)
57 3vue_A GBSS-I, granule-bound s 92.3 1.2 4E-05 46.0 12.7 171 316-512 328-510 (536)
58 2phj_A 5'-nucleotidase SURE; S 91.9 0.84 2.9E-05 41.5 9.6 115 35-177 1-128 (251)
59 3fgn_A Dethiobiotin synthetase 89.7 4 0.00014 37.3 12.2 52 19-70 10-62 (251)
60 3vue_A GBSS-I, granule-bound s 86.9 0.38 1.3E-05 49.7 3.7 40 34-73 8-53 (536)
61 2ywr_A Phosphoribosylglycinami 85.9 9 0.00031 34.0 11.8 108 35-177 1-111 (216)
62 3auf_A Glycinamide ribonucleot 85.8 12 0.00042 33.4 12.7 109 34-177 21-132 (229)
63 3av3_A Phosphoribosylglycinami 84.1 14 0.00048 32.6 12.2 108 35-177 3-113 (212)
64 1mvl_A PPC decarboxylase athal 80.1 2.1 7.3E-05 37.8 5.1 52 26-79 10-61 (209)
65 1g5t_A COB(I)alamin adenosyltr 80.1 21 0.00072 31.0 11.4 97 35-157 28-130 (196)
66 2bw0_A 10-FTHFDH, 10-formyltet 78.1 8 0.00027 36.8 8.8 40 138-177 90-130 (329)
67 3t5t_A Putative glycosyltransf 75.2 10 0.00036 38.2 9.2 111 378-513 353-473 (496)
68 3iqw_A Tail-anchored protein t 73.7 19 0.00065 34.3 10.2 42 34-75 14-56 (334)
69 3tqr_A Phosphoribosylglycinami 72.5 32 0.0011 30.3 10.7 42 136-177 72-114 (215)
70 3ty2_A 5'-nucleotidase SURE; s 72.3 4.2 0.00014 37.1 4.9 44 33-78 9-52 (261)
71 3zqu_A Probable aromatic acid 72.2 2.9 9.8E-05 37.0 3.7 45 34-79 3-47 (209)
72 3lqk_A Dipicolinate synthase s 70.8 5.5 0.00019 34.9 5.2 43 34-77 6-49 (201)
73 3qjg_A Epidermin biosynthesis 69.4 5.5 0.00019 34.0 4.8 43 36-79 6-48 (175)
74 3ug7_A Arsenical pump-driving 68.9 20 0.00069 34.3 9.3 46 34-80 24-70 (349)
75 1e2b_A Enzyme IIB-cellobiose; 68.9 11 0.00037 29.1 6.0 40 33-72 1-40 (106)
76 3da8_A Probable 5'-phosphoribo 68.7 15 0.00052 32.4 7.7 42 136-177 78-120 (215)
77 4dim_A Phosphoribosylglycinami 68.7 18 0.00063 35.1 9.3 34 34-72 6-39 (403)
78 3vot_A L-amino acid ligase, BL 68.0 29 0.00098 34.1 10.6 34 138-171 66-101 (425)
79 1uqt_A Alpha, alpha-trehalose- 67.9 18 0.0006 36.5 9.0 109 379-513 333-454 (482)
80 3igf_A ALL4481 protein; two-do 67.7 7.9 0.00027 37.6 6.1 37 35-71 1-38 (374)
81 2ejb_A Probable aromatic acid 67.5 4.8 0.00016 34.9 4.1 44 36-80 2-45 (189)
82 1qzu_A Hypothetical protein MD 66.8 5.6 0.00019 35.0 4.4 50 27-79 13-63 (206)
83 4gi5_A Quinone reductase; prot 66.4 8.6 0.0003 35.6 5.8 46 21-70 12-60 (280)
84 1ccw_A Protein (glutamate muta 65.5 9 0.00031 31.1 5.2 39 34-72 2-40 (137)
85 1sbz_A Probable aromatic acid 65.2 4.1 0.00014 35.5 3.2 43 36-79 1-44 (197)
86 1jkx_A GART;, phosphoribosylgl 65.2 71 0.0024 27.9 12.5 107 36-177 1-110 (212)
87 1kjn_A MTH0777; hypotethical p 64.9 5.4 0.00018 32.7 3.5 46 35-80 6-53 (157)
88 4a1f_A DNAB helicase, replicat 63.5 9.3 0.00032 36.5 5.6 42 37-78 48-89 (338)
89 3mcu_A Dipicolinate synthase, 61.1 8.5 0.00029 33.8 4.5 41 34-75 4-45 (207)
90 1g63_A Epidermin modifying enz 60.9 7.3 0.00025 33.5 4.0 43 36-79 3-45 (181)
91 3gpi_A NAD-dependent epimerase 60.8 8.9 0.00031 35.3 4.9 34 34-72 2-35 (286)
92 2gt1_A Lipopolysaccharide hept 60.7 12 0.00041 35.2 6.0 45 36-80 1-47 (326)
93 4ds3_A Phosphoribosylglycinami 58.5 69 0.0023 28.0 9.9 41 137-177 76-117 (209)
94 4b4o_A Epimerase family protei 57.4 10 0.00035 35.2 4.7 34 36-73 1-34 (298)
95 3n7t_A Macrophage binding prot 57.3 19 0.00066 32.5 6.4 38 35-72 9-57 (247)
96 2lpm_A Two-component response 57.2 8.5 0.00029 30.6 3.5 36 140-175 46-86 (123)
97 3nb0_A Glycogen [starch] synth 56.3 18 0.00062 38.0 6.6 34 388-423 513-550 (725)
98 2iz6_A Molybdenum cofactor car 56.3 92 0.0031 26.3 10.6 133 302-471 35-173 (176)
99 2i2c_A Probable inorganic poly 56.1 8.6 0.00029 35.5 3.9 29 395-423 35-69 (272)
100 2r8r_A Sensor protein; KDPD, P 55.4 18 0.00061 32.3 5.6 40 34-73 5-44 (228)
101 3to5_A CHEY homolog; alpha(5)b 54.8 17 0.00059 29.3 5.1 37 142-178 52-97 (134)
102 1id1_A Putative potassium chan 54.3 11 0.00037 31.0 3.9 34 34-72 2-35 (153)
103 1fmt_A Methionyl-tRNA FMet for 54.0 40 0.0014 31.7 8.2 40 138-177 72-112 (314)
104 3kkl_A Probable chaperone prot 53.7 19 0.00065 32.5 5.7 39 34-72 2-51 (244)
105 3gl9_A Response regulator; bet 53.6 23 0.0008 27.2 5.7 38 140-177 39-85 (122)
106 2gt1_A Lipopolysaccharide hept 53.4 7.6 0.00026 36.6 3.1 136 313-471 177-321 (326)
107 3io3_A DEHA2D07832P; chaperone 53.1 47 0.0016 31.7 8.7 41 34-74 16-59 (348)
108 1xmp_A PURE, phosphoribosylami 52.9 1E+02 0.0035 25.8 11.4 147 314-496 11-166 (170)
109 3mc3_A DSRE/DSRF-like family p 52.8 28 0.00094 28.0 6.0 43 35-77 15-60 (134)
110 2vo1_A CTP synthase 1; pyrimid 52.7 14 0.00049 33.6 4.5 43 34-76 21-66 (295)
111 2q6t_A DNAB replication FORK h 52.7 33 0.0011 34.0 7.8 41 37-77 202-243 (444)
112 3l6d_A Putative oxidoreductase 52.6 8.7 0.0003 36.1 3.3 39 28-71 2-40 (306)
113 4egb_A DTDP-glucose 4,6-dehydr 52.3 87 0.003 29.2 10.6 34 34-71 23-58 (346)
114 2xj4_A MIPZ; replication, cell 52.3 15 0.00051 33.9 4.9 40 34-73 2-43 (286)
115 1meo_A Phosophoribosylglycinam 51.6 1.2E+02 0.0042 26.4 11.6 41 137-177 69-110 (209)
116 3nbm_A PTS system, lactose-spe 51.0 23 0.00078 27.4 4.9 37 34-70 5-41 (108)
117 1jx7_A Hypothetical protein YC 50.0 19 0.00066 27.8 4.6 40 36-75 2-46 (117)
118 2a5l_A Trp repressor binding p 50.0 19 0.00066 30.9 5.0 39 34-72 4-43 (200)
119 3bgw_A DNAB-like replicative h 49.8 24 0.00081 35.1 6.2 43 36-78 198-240 (444)
120 2yxb_A Coenzyme B12-dependent 49.3 15 0.0005 30.8 3.9 40 34-73 17-56 (161)
121 3kcq_A Phosphoribosylglycinami 48.8 1.2E+02 0.0039 26.7 9.8 41 137-177 72-113 (215)
122 2l2q_A PTS system, cellobiose- 48.2 25 0.00085 27.1 4.8 38 34-71 3-40 (109)
123 3llv_A Exopolyphosphatase-rela 48.1 12 0.0004 30.2 3.1 34 34-72 5-38 (141)
124 3tqq_A Methionyl-tRNA formyltr 47.1 23 0.00078 33.3 5.3 33 36-73 3-35 (314)
125 2ew2_A 2-dehydropantoate 2-red 46.4 14 0.00047 34.5 3.7 33 34-71 2-34 (316)
126 1tvm_A PTS system, galactitol- 46.2 44 0.0015 25.9 6.0 38 33-70 19-57 (113)
127 3kjh_A CO dehydrogenase/acetyl 46.0 15 0.00051 32.8 3.8 38 36-73 1-38 (254)
128 2hy5_A Putative sulfurtransfer 45.8 29 0.00098 27.6 5.0 39 36-74 1-43 (130)
129 1lss_A TRK system potassium up 45.8 25 0.00087 27.7 4.8 33 34-71 3-35 (140)
130 3t6k_A Response regulator rece 45.5 37 0.0013 26.7 5.7 38 141-178 42-88 (136)
131 1p3y_1 MRSD protein; flavoprot 45.3 9 0.00031 33.3 2.0 44 35-79 8-51 (194)
132 3rfo_A Methionyl-tRNA formyltr 44.9 25 0.00086 33.1 5.1 36 33-73 2-37 (317)
133 1y80_A Predicted cobalamin bin 44.3 25 0.00087 30.7 4.9 41 34-74 87-127 (210)
134 1qgu_B Protein (nitrogenase mo 44.3 1.2E+02 0.0041 30.7 10.5 34 138-174 425-465 (519)
135 2gk4_A Conserved hypothetical 43.8 37 0.0013 30.3 5.8 23 51-73 31-53 (232)
136 1rw7_A YDR533CP; alpha-beta sa 43.6 39 0.0013 30.3 6.1 39 35-73 3-52 (243)
137 2i2x_B MTAC, methyltransferase 43.6 34 0.0012 31.1 5.8 40 34-73 122-161 (258)
138 3f6p_A Transcriptional regulat 43.2 40 0.0014 25.7 5.5 39 139-177 38-82 (120)
139 3m6m_D Sensory/regulatory prot 43.1 31 0.0011 27.4 5.0 38 140-177 51-99 (143)
140 1f0y_A HCDH, L-3-hydroxyacyl-C 42.3 17 0.00058 33.9 3.6 38 28-72 10-47 (302)
141 3trh_A Phosphoribosylaminoimid 42.2 1.5E+02 0.0052 24.7 9.7 145 314-495 6-160 (169)
142 3g0o_A 3-hydroxyisobutyrate de 42.0 15 0.00052 34.2 3.2 33 34-71 6-38 (303)
143 2q62_A ARSH; alpha/beta, flavo 42.0 35 0.0012 30.8 5.5 44 28-71 27-73 (247)
144 2qs7_A Uncharacterized protein 42.0 35 0.0012 27.8 5.0 40 37-76 9-49 (144)
145 1o97_C Electron transferring f 40.8 35 0.0012 31.2 5.3 41 137-177 102-148 (264)
146 2fb6_A Conserved hypothetical 40.2 27 0.00091 27.4 3.9 43 28-73 3-49 (117)
147 1bg6_A N-(1-D-carboxylethyl)-L 40.1 20 0.00069 34.1 3.8 33 34-71 3-35 (359)
148 3pdi_B Nitrogenase MOFE cofact 39.7 25 0.00086 35.1 4.5 34 138-174 366-399 (458)
149 2bln_A Protein YFBG; transfera 39.5 2.3E+02 0.0077 26.3 10.9 40 138-177 66-106 (305)
150 3ouz_A Biotin carboxylase; str 39.3 92 0.0031 30.6 8.7 33 35-72 6-38 (446)
151 1p9o_A Phosphopantothenoylcyst 39.2 20 0.00069 33.6 3.5 38 37-74 38-90 (313)
152 3f6r_A Flavodoxin; FMN binding 39.0 38 0.0013 27.3 4.9 39 35-73 1-40 (148)
153 3qvl_A Putative hydantoin race 38.7 1.5E+02 0.005 26.5 9.1 31 144-174 66-97 (245)
154 3dfu_A Uncharacterized protein 38.5 21 0.00073 31.9 3.4 33 34-71 5-37 (232)
155 3ghy_A Ketopantoate reductase 38.3 19 0.00066 34.1 3.3 34 34-72 2-35 (335)
156 1efv_B Electron transfer flavo 38.2 40 0.0014 30.5 5.3 41 137-177 106-152 (255)
157 2nly_A BH1492 protein, diverge 38.1 1.8E+02 0.006 26.1 9.4 36 136-173 117-155 (245)
158 3rg8_A Phosphoribosylaminoimid 37.8 1.7E+02 0.0059 24.2 10.5 138 316-494 4-151 (159)
159 1q57_A DNA primase/helicase; d 37.5 55 0.0019 33.0 6.8 42 37-78 244-286 (503)
160 3c3m_A Response regulator rece 37.5 55 0.0019 25.6 5.6 37 141-177 41-86 (138)
161 3eag_A UDP-N-acetylmuramate:L- 37.5 32 0.0011 32.4 4.7 34 34-71 3-36 (326)
162 1gsa_A Glutathione synthetase; 37.1 27 0.00094 32.3 4.2 38 35-72 1-41 (316)
163 1qkk_A DCTD, C4-dicarboxylate 36.6 1E+02 0.0035 24.5 7.3 62 414-489 74-135 (155)
164 4iiu_A 3-oxoacyl-[acyl-carrier 36.5 75 0.0026 28.6 7.0 34 36-72 26-59 (267)
165 3gt7_A Sensor protein; structu 36.5 54 0.0018 26.3 5.5 38 140-177 44-90 (154)
166 2hy5_B Intracellular sulfur ox 36.4 38 0.0013 27.3 4.3 42 35-76 5-49 (136)
167 1efp_B ETF, protein (electron 36.0 40 0.0014 30.5 4.9 40 138-177 104-149 (252)
168 2zki_A 199AA long hypothetical 35.9 34 0.0011 29.3 4.3 39 34-73 3-42 (199)
169 2zts_A Putative uncharacterize 35.8 63 0.0022 28.4 6.3 60 14-78 14-74 (251)
170 3czc_A RMPB; alpha/beta sandwi 35.7 38 0.0013 26.1 4.1 38 34-71 17-56 (110)
171 3q9l_A Septum site-determining 35.6 37 0.0013 30.3 4.7 39 35-73 1-41 (260)
172 1hdo_A Biliverdin IX beta redu 35.6 57 0.002 27.6 5.8 33 36-72 4-36 (206)
173 3doj_A AT3G25530, dehydrogenas 35.6 30 0.001 32.3 4.2 33 34-71 20-52 (310)
174 3dfz_A SIRC, precorrin-2 dehyd 35.6 1.3E+02 0.0045 26.4 8.1 150 307-490 26-184 (223)
175 1u0t_A Inorganic polyphosphate 35.4 36 0.0012 31.8 4.6 28 396-423 76-107 (307)
176 3f2v_A General stress protein 35.2 24 0.00083 30.5 3.1 36 35-70 1-37 (192)
177 2h78_A Hibadh, 3-hydroxyisobut 35.1 30 0.001 32.0 4.1 33 34-71 2-34 (302)
178 3o1l_A Formyltetrahydrofolate 35.1 2.4E+02 0.0084 26.0 10.2 107 33-177 103-212 (302)
179 2d1p_B TUSC, hypothetical UPF0 34.9 51 0.0017 25.7 4.8 40 37-76 3-45 (119)
180 1xp8_A RECA protein, recombina 34.9 1.5E+02 0.005 28.4 9.0 40 37-76 76-115 (366)
181 3nhm_A Response regulator; pro 34.8 71 0.0024 24.5 5.9 38 140-177 40-86 (133)
182 1dbw_A Transcriptional regulat 34.8 64 0.0022 24.6 5.5 40 139-178 39-85 (126)
183 2r85_A PURP protein PF1517; AT 34.8 35 0.0012 31.9 4.5 32 36-73 3-34 (334)
184 1g3q_A MIND ATPase, cell divis 34.6 42 0.0014 29.5 4.9 38 36-73 2-41 (237)
185 3dhn_A NAD-dependent epimerase 34.5 49 0.0017 28.7 5.2 34 35-72 4-37 (227)
186 2d1p_A TUSD, hypothetical UPF0 34.4 67 0.0023 26.0 5.5 40 35-74 12-55 (140)
187 3ezx_A MMCP 1, monomethylamine 34.2 45 0.0015 29.3 4.8 45 34-78 91-135 (215)
188 4b4k_A N5-carboxyaminoimidazol 34.0 2.1E+02 0.0073 24.1 13.0 146 313-496 21-177 (181)
189 2q5c_A NTRC family transcripti 33.8 42 0.0014 29.0 4.5 38 139-179 134-171 (196)
190 3a10_A Response regulator; pho 33.3 90 0.0031 23.1 6.1 38 140-177 38-82 (116)
191 2qyt_A 2-dehydropantoate 2-red 33.0 22 0.00074 33.2 2.7 37 28-71 3-45 (317)
192 3q0i_A Methionyl-tRNA formyltr 33.0 61 0.0021 30.4 5.8 35 34-73 6-40 (318)
193 2g1u_A Hypothetical protein TM 32.6 48 0.0017 27.0 4.6 34 34-72 18-51 (155)
194 3k96_A Glycerol-3-phosphate de 32.6 29 0.001 33.3 3.5 34 34-72 28-61 (356)
195 3hr8_A Protein RECA; alpha and 32.5 1.9E+02 0.0064 27.5 9.2 39 38-76 64-102 (356)
196 3eod_A Protein HNR; response r 32.5 63 0.0022 24.7 5.1 39 140-178 44-89 (130)
197 3tov_A Glycosyl transferase fa 32.4 2.2E+02 0.0075 26.7 9.9 99 37-177 187-289 (349)
198 4dll_A 2-hydroxy-3-oxopropiona 32.3 48 0.0016 31.1 5.0 33 34-71 30-62 (320)
199 3grc_A Sensor protein, kinase; 32.3 70 0.0024 24.8 5.5 38 141-178 44-90 (140)
200 3obb_A Probable 3-hydroxyisobu 32.1 46 0.0016 31.0 4.7 31 35-70 3-33 (300)
201 2vqe_B 30S ribosomal protein S 32.1 2.4E+02 0.0083 25.4 9.2 32 146-177 157-190 (256)
202 1cp2_A CP2, nitrogenase iron p 32.0 44 0.0015 30.1 4.6 37 36-72 2-38 (269)
203 3qxc_A Dethiobiotin synthetase 32.0 45 0.0015 29.9 4.5 36 35-70 20-57 (242)
204 3k9g_A PF-32 protein; ssgcid, 32.0 44 0.0015 30.1 4.6 46 26-74 19-66 (267)
205 1evy_A Glycerol-3-phosphate de 31.9 20 0.00069 34.4 2.3 33 35-72 15-47 (366)
206 3l4e_A Uncharacterized peptida 31.7 1.3E+02 0.0045 26.0 7.4 48 302-349 16-63 (206)
207 2rjn_A Response regulator rece 31.7 68 0.0023 25.6 5.3 40 140-179 44-90 (154)
208 1tmy_A CHEY protein, TMY; chem 31.7 69 0.0024 24.0 5.2 37 142-178 42-85 (120)
209 1zgz_A Torcad operon transcrip 31.4 76 0.0026 23.9 5.4 39 139-177 38-82 (122)
210 4huj_A Uncharacterized protein 31.3 28 0.00096 30.6 3.0 32 35-71 23-54 (220)
211 1dhr_A Dihydropteridine reduct 31.2 45 0.0015 29.5 4.4 34 36-72 7-40 (241)
212 1y1p_A ARII, aldehyde reductas 31.2 59 0.002 30.2 5.5 35 34-72 10-44 (342)
213 1ydg_A Trp repressor binding p 31.2 60 0.0021 28.0 5.2 39 34-72 5-44 (211)
214 1pzg_A LDH, lactate dehydrogen 31.1 29 0.00098 32.9 3.2 40 28-72 2-42 (331)
215 1wcv_1 SOJ, segregation protei 30.8 39 0.0013 30.4 4.0 40 34-73 4-45 (257)
216 4e7p_A Response regulator; DNA 30.6 74 0.0025 25.2 5.4 41 137-177 56-103 (150)
217 1u11_A PURE (N5-carboxyaminoim 30.3 2.5E+02 0.0085 23.7 9.6 145 315-497 22-177 (182)
218 3b2n_A Uncharacterized protein 30.2 66 0.0023 24.9 4.9 39 139-177 41-86 (133)
219 3hv2_A Response regulator/HD d 30.2 68 0.0023 25.5 5.1 39 140-178 51-96 (153)
220 1qyd_A Pinoresinol-lariciresin 29.9 50 0.0017 30.4 4.7 35 35-73 4-38 (313)
221 2r6a_A DNAB helicase, replicat 29.8 75 0.0026 31.5 6.2 40 37-76 205-245 (454)
222 1pno_A NAD(P) transhydrogenase 29.8 53 0.0018 27.4 4.0 38 36-73 24-64 (180)
223 2c5m_A CTP synthase; cytidine 29.8 35 0.0012 30.9 3.1 42 35-76 22-66 (294)
224 3icc_A Putative 3-oxoacyl-(acy 29.6 2.8E+02 0.0097 24.1 10.1 34 37-73 8-41 (255)
225 3c1o_A Eugenol synthase; pheny 29.6 50 0.0017 30.6 4.6 35 35-73 4-38 (321)
226 3r6d_A NAD-dependent epimerase 29.5 57 0.002 28.2 4.8 35 35-72 4-39 (221)
227 3rpe_A MDAB, modulator of drug 29.4 77 0.0026 27.9 5.5 39 33-71 23-68 (218)
228 3b6i_A Flavoprotein WRBA; flav 29.4 59 0.002 27.6 4.8 39 35-73 1-41 (198)
229 1d4o_A NADP(H) transhydrogenas 29.3 54 0.0019 27.4 4.0 37 37-73 24-63 (184)
230 2qxy_A Response regulator; reg 29.2 72 0.0025 24.9 5.0 38 139-177 40-84 (142)
231 1t1j_A Hypothetical protein; s 29.2 64 0.0022 25.6 4.4 33 35-67 7-47 (125)
232 3kht_A Response regulator; PSI 29.1 96 0.0033 24.2 5.8 39 139-177 43-90 (144)
233 1xhf_A DYE resistance, aerobic 28.8 95 0.0032 23.3 5.5 38 140-177 40-83 (123)
234 1mio_B Nitrogenase molybdenum 28.6 57 0.0019 32.4 5.0 34 138-174 376-409 (458)
235 2a9o_A Response regulator; ess 28.6 89 0.003 23.2 5.3 37 142-178 40-82 (120)
236 1hyq_A MIND, cell division inh 28.5 49 0.0017 29.7 4.2 38 36-73 2-41 (263)
237 3h7a_A Short chain dehydrogena 28.4 1.4E+02 0.0046 26.6 7.2 34 36-72 7-40 (252)
238 3e18_A Oxidoreductase; dehydro 28.3 3.5E+02 0.012 25.4 10.5 109 316-447 8-124 (359)
239 2afh_E Nitrogenase iron protei 28.2 62 0.0021 29.6 4.9 38 36-73 3-40 (289)
240 2vpq_A Acetyl-COA carboxylase; 28.2 1.2E+02 0.0041 29.7 7.4 32 36-72 2-33 (451)
241 2pl1_A Transcriptional regulat 28.1 1.1E+02 0.0039 22.7 5.9 39 139-177 36-81 (121)
242 3hn2_A 2-dehydropantoate 2-red 28.1 49 0.0017 30.8 4.3 33 36-73 3-35 (312)
243 1ehi_A LMDDL2, D-alanine:D-lac 28.0 51 0.0017 31.7 4.5 39 34-72 2-45 (377)
244 2hmt_A YUAA protein; RCK, KTN, 27.9 37 0.0013 26.9 2.9 33 35-72 6-38 (144)
245 1rcu_A Conserved hypothetical 27.7 2.9E+02 0.0099 23.6 9.6 96 302-422 48-149 (195)
246 3i42_A Response regulator rece 27.7 77 0.0026 24.1 4.8 39 139-177 39-86 (127)
247 1srr_A SPO0F, sporulation resp 27.5 75 0.0026 24.0 4.7 36 142-177 42-84 (124)
248 2e6c_A 5'-nucleotidase SURE; S 27.4 69 0.0024 28.7 4.8 57 36-98 1-57 (244)
249 3cg0_A Response regulator rece 27.4 82 0.0028 24.3 5.0 38 141-178 48-92 (140)
250 4inf_A Metal-dependent hydrola 27.3 1.5E+02 0.0051 28.4 7.6 51 302-352 163-213 (373)
251 2ph1_A Nucleotide-binding prot 27.3 61 0.0021 29.2 4.6 41 35-75 17-59 (262)
252 3pdi_A Nitrogenase MOFE cofact 27.2 48 0.0016 33.3 4.2 36 136-174 390-425 (483)
253 2wm1_A 2-amino-3-carboxymucona 27.1 1.3E+02 0.0045 28.0 7.2 51 302-352 127-177 (336)
254 3cu5_A Two component transcrip 27.1 86 0.0029 24.5 5.1 36 141-176 43-85 (141)
255 3pid_A UDP-glucose 6-dehydroge 27.0 42 0.0015 33.1 3.6 38 29-72 30-67 (432)
256 2vrn_A Protease I, DR1199; cys 26.9 1.2E+02 0.0042 25.4 6.3 39 34-73 8-46 (190)
257 2fsv_C NAD(P) transhydrogenase 26.9 61 0.0021 27.7 4.0 38 36-73 47-87 (203)
258 3cmw_A Protein RECA, recombina 26.8 3.5E+02 0.012 31.9 11.5 42 37-78 734-775 (1706)
259 2qzj_A Two-component response 26.8 82 0.0028 24.5 4.9 38 140-177 41-84 (136)
260 2dpo_A L-gulonate 3-dehydrogen 26.8 43 0.0015 31.5 3.5 35 33-72 4-38 (319)
261 3v8b_A Putative dehydrogenase, 26.7 62 0.0021 29.6 4.6 33 37-72 29-61 (283)
262 3u7q_A Nitrogenase molybdenum- 26.7 49 0.0017 33.3 4.1 35 137-174 407-441 (492)
263 3cz5_A Two-component response 26.6 1.1E+02 0.0039 24.1 5.9 39 140-178 44-89 (153)
264 1mb3_A Cell division response 26.6 77 0.0026 23.8 4.6 37 141-177 39-84 (124)
265 2gas_A Isoflavone reductase; N 26.5 52 0.0018 30.2 4.1 35 35-73 2-36 (307)
266 3ic5_A Putative saccharopine d 26.4 59 0.002 24.5 3.8 33 35-72 5-38 (118)
267 1u7z_A Coenzyme A biosynthesis 26.4 68 0.0023 28.4 4.5 23 50-72 35-57 (226)
268 2etv_A Iron(III) ABC transport 26.4 49 0.0017 31.4 3.9 33 143-175 92-125 (346)
269 3end_A Light-independent proto 26.4 72 0.0025 29.4 5.1 39 35-73 41-79 (307)
270 4hb9_A Similarities with proba 26.4 44 0.0015 32.1 3.7 29 36-69 2-30 (412)
271 2c20_A UDP-glucose 4-epimerase 26.3 48 0.0016 30.8 3.9 34 35-72 1-34 (330)
272 1djl_A Transhydrogenase DIII; 26.3 64 0.0022 27.7 4.0 38 36-73 46-86 (207)
273 3f67_A Putative dienelactone h 26.1 88 0.003 26.8 5.5 36 36-71 32-67 (241)
274 2raf_A Putative dinucleotide-b 26.1 58 0.002 28.2 4.1 34 34-72 18-51 (209)
275 1j9j_A Stationary phase surviV 26.1 74 0.0025 28.6 4.8 42 36-79 1-42 (247)
276 2an1_A Putative kinase; struct 26.1 27 0.00094 32.3 2.0 27 396-422 64-94 (292)
277 3u7q_B Nitrogenase molybdenum- 26.0 68 0.0023 32.5 5.0 34 138-174 429-469 (523)
278 4dzz_A Plasmid partitioning pr 26.0 67 0.0023 27.2 4.5 36 38-73 4-40 (206)
279 3nrb_A Formyltetrahydrofolate 26.0 3.8E+02 0.013 24.5 9.8 107 33-177 86-196 (287)
280 3fet_A Electron transfer flavo 25.9 87 0.003 26.1 4.9 39 137-177 61-102 (166)
281 3afo_A NADH kinase POS5; alpha 25.8 47 0.0016 32.2 3.7 35 387-423 108-147 (388)
282 2lnd_A De novo designed protei 25.8 78 0.0027 22.5 3.7 50 413-471 49-100 (112)
283 3i83_A 2-dehydropantoate 2-red 25.5 54 0.0018 30.7 4.0 33 36-73 3-35 (320)
284 1qkk_A DCTD, C4-dicarboxylate 25.5 85 0.0029 25.0 4.9 41 139-179 39-86 (155)
285 3ius_A Uncharacterized conserv 25.5 66 0.0023 29.1 4.6 34 35-73 5-38 (286)
286 3aek_B Light-independent proto 25.4 52 0.0018 33.4 4.1 35 138-175 340-374 (525)
287 3ea0_A ATPase, para family; al 25.4 53 0.0018 28.9 3.8 41 34-74 2-45 (245)
288 1p6q_A CHEY2; chemotaxis, sign 25.4 94 0.0032 23.6 5.0 38 140-177 44-90 (129)
289 1ydh_A AT5G11950; structural g 25.2 1.9E+02 0.0066 25.2 7.2 97 302-421 31-141 (216)
290 3i4f_A 3-oxoacyl-[acyl-carrier 25.1 84 0.0029 28.0 5.2 35 35-72 6-40 (264)
291 3eul_A Possible nitrate/nitrit 25.0 82 0.0028 25.0 4.7 41 137-177 51-98 (152)
292 3vps_A TUNA, NAD-dependent epi 25.0 80 0.0027 29.0 5.2 34 35-72 7-40 (321)
293 1jbe_A Chemotaxis protein CHEY 25.0 1.2E+02 0.0041 22.8 5.6 38 140-177 42-88 (128)
294 1ks9_A KPA reductase;, 2-dehyd 25.0 57 0.0019 29.7 4.0 32 36-72 1-32 (291)
295 3lte_A Response regulator; str 25.0 1.2E+02 0.0042 23.0 5.6 38 140-177 43-88 (132)
296 2xdq_B Light-independent proto 24.9 54 0.0018 33.2 4.1 35 138-175 363-397 (511)
297 4gbj_A 6-phosphogluconate dehy 24.9 64 0.0022 29.9 4.3 29 37-70 7-35 (297)
298 3mjf_A Phosphoribosylamine--gl 24.9 60 0.0021 31.9 4.4 26 34-64 2-27 (431)
299 3pdu_A 3-hydroxyisobutyrate de 24.9 47 0.0016 30.4 3.4 32 35-71 1-32 (287)
300 3v2h_A D-beta-hydroxybutyrate 24.9 70 0.0024 29.1 4.6 33 36-71 25-57 (281)
301 2c5a_A GDP-mannose-3', 5'-epim 24.9 71 0.0024 30.5 4.8 35 34-72 28-62 (379)
302 1u0t_A Inorganic polyphosphate 24.8 63 0.0022 30.1 4.3 37 35-71 4-41 (307)
303 3jte_A Response regulator rece 24.7 1.1E+02 0.0037 23.8 5.3 34 145-178 47-87 (143)
304 1qyc_A Phenylcoumaran benzylic 24.7 69 0.0023 29.3 4.6 35 35-73 4-38 (308)
305 1z7e_A Protein aRNA; rossmann 24.6 1.2E+02 0.0042 31.6 7.0 40 138-177 66-106 (660)
306 1e4e_A Vancomycin/teicoplanin 24.6 45 0.0015 31.5 3.3 38 34-72 2-44 (343)
307 3g79_A NDP-N-acetyl-D-galactos 24.6 74 0.0025 31.8 5.0 35 34-73 17-53 (478)
308 1iow_A DD-ligase, DDLB, D-ALA\ 24.5 1E+02 0.0034 28.2 5.7 38 36-73 3-44 (306)
309 3gi1_A LBP, laminin-binding pr 24.5 3.2E+02 0.011 24.9 9.0 40 136-175 217-258 (286)
310 4h15_A Short chain alcohol deh 24.5 98 0.0033 28.0 5.4 32 37-71 12-43 (261)
311 1yt5_A Inorganic polyphosphate 24.4 23 0.00079 32.2 1.1 52 396-472 42-96 (258)
312 4e12_A Diketoreductase; oxidor 24.4 61 0.0021 29.7 4.1 33 34-71 3-35 (283)
313 3obi_A Formyltetrahydrofolate 24.4 4.1E+02 0.014 24.3 9.9 107 33-177 87-197 (288)
314 3n53_A Response regulator rece 24.2 71 0.0024 24.9 4.0 38 140-177 39-85 (140)
315 3lrx_A Putative hydrogenase; a 24.2 61 0.0021 26.7 3.7 36 36-74 24-59 (158)
316 3rqi_A Response regulator prot 24.1 69 0.0024 26.7 4.1 39 140-178 44-89 (184)
317 3qsg_A NAD-binding phosphogluc 24.1 43 0.0015 31.3 3.0 33 34-71 23-56 (312)
318 3l4b_C TRKA K+ channel protien 24.0 31 0.0011 30.2 1.9 32 36-72 1-32 (218)
319 1t5b_A Acyl carrier protein ph 24.0 73 0.0025 27.0 4.3 38 35-72 1-44 (201)
320 2ark_A Flavodoxin; FMN, struct 24.0 82 0.0028 26.6 4.6 40 34-73 3-44 (188)
321 1u94_A RECA protein, recombina 23.9 2.8E+02 0.0096 26.3 8.8 40 37-76 65-104 (356)
322 1vhq_A Enhancing lycopene bios 23.9 1.3E+02 0.0046 26.3 6.2 38 35-73 6-48 (232)
323 2pn1_A Carbamoylphosphate synt 23.8 90 0.0031 29.0 5.3 33 34-72 3-37 (331)
324 2bru_C NAD(P) transhydrogenase 23.8 60 0.002 27.2 3.3 38 36-73 31-71 (186)
325 4grd_A N5-CAIR mutase, phospho 23.8 3.2E+02 0.011 22.8 11.8 146 313-495 11-166 (173)
326 1l5x_A SurviVal protein E; str 23.7 85 0.0029 28.8 4.8 42 36-79 1-42 (280)
327 2v4n_A Multifunctional protein 23.6 91 0.0031 28.2 4.9 42 36-79 2-43 (254)
328 3lp6_A Phosphoribosylaminoimid 23.6 3.3E+02 0.011 22.8 9.9 142 315-495 8-159 (174)
329 2pju_A Propionate catabolism o 23.5 91 0.0031 27.5 4.8 30 395-425 63-92 (225)
330 2qr3_A Two-component system re 23.5 1E+02 0.0036 23.7 4.9 38 141-178 41-90 (140)
331 2a33_A Hypothetical protein; s 23.4 1.1E+02 0.0037 26.8 5.3 39 34-72 12-54 (215)
332 3cfy_A Putative LUXO repressor 23.4 1E+02 0.0034 24.0 4.8 36 142-177 43-85 (137)
333 2j48_A Two-component sensor ki 23.4 1.1E+02 0.0038 22.4 4.9 38 140-177 38-84 (119)
334 3hwr_A 2-dehydropantoate 2-red 23.4 57 0.002 30.5 3.7 31 34-69 18-48 (318)
335 3r6w_A FMN-dependent NADH-azor 23.3 75 0.0026 27.5 4.3 37 35-71 1-43 (212)
336 3c97_A Signal transduction his 23.3 1.5E+02 0.005 22.9 5.8 26 141-166 48-75 (140)
337 3psh_A Protein HI_1472; substr 23.2 76 0.0026 29.6 4.6 34 143-176 80-114 (326)
338 4e21_A 6-phosphogluconate dehy 23.2 59 0.002 31.1 3.8 33 34-71 21-53 (358)
339 2pju_A Propionate catabolism o 23.2 75 0.0026 28.1 4.2 31 143-176 150-180 (225)
340 1sb8_A WBPP; epimerase, 4-epim 23.2 68 0.0023 30.1 4.3 34 35-72 27-60 (352)
341 3of5_A Dethiobiotin synthetase 23.2 96 0.0033 27.3 5.0 37 34-70 3-40 (228)
342 3osu_A 3-oxoacyl-[acyl-carrier 23.1 2E+02 0.0069 25.2 7.3 34 36-72 4-37 (246)
343 3fwz_A Inner membrane protein 23.0 45 0.0015 26.6 2.6 32 36-72 8-39 (140)
344 2rdm_A Response regulator rece 23.0 1.4E+02 0.0049 22.5 5.6 37 141-177 43-88 (132)
345 1z82_A Glycerol-3-phosphate de 23.0 61 0.0021 30.5 3.9 32 36-72 15-46 (335)
346 1d1q_A Tyrosine phosphatase (E 22.9 1.2E+02 0.0042 24.9 5.4 31 33-63 5-36 (161)
347 4e3z_A Putative oxidoreductase 22.8 1.7E+02 0.0057 26.2 6.8 34 35-71 25-58 (272)
348 3cmw_A Protein RECA, recombina 22.8 3.8E+02 0.013 31.5 10.8 42 37-78 385-426 (1706)
349 2w36_A Endonuclease V; hypoxan 22.8 61 0.0021 28.7 3.5 39 139-177 93-140 (225)
350 2b4a_A BH3024; flavodoxin-like 22.8 1E+02 0.0034 23.8 4.7 38 138-175 50-95 (138)
351 3qha_A Putative oxidoreductase 22.7 47 0.0016 30.7 3.0 32 35-71 15-46 (296)
352 3l77_A Short-chain alcohol deh 22.6 84 0.0029 27.4 4.6 34 36-72 2-35 (235)
353 4iin_A 3-ketoacyl-acyl carrier 22.5 1E+02 0.0035 27.7 5.3 33 37-72 30-62 (271)
354 2r6j_A Eugenol synthase 1; phe 22.5 69 0.0023 29.6 4.1 33 37-73 13-45 (318)
355 1e6u_A GDP-fucose synthetase; 22.4 59 0.002 30.0 3.6 33 35-71 3-35 (321)
356 3e5n_A D-alanine-D-alanine lig 22.4 52 0.0018 31.8 3.3 41 33-73 20-64 (386)
357 4e5v_A Putative THUA-like prot 22.3 1E+02 0.0035 28.3 5.1 38 34-72 3-43 (281)
358 2r25_B Osmosensing histidine p 22.3 1.6E+02 0.0056 22.5 5.9 32 146-177 51-90 (133)
359 4dad_A Putative pilus assembly 22.3 69 0.0024 25.2 3.6 40 138-177 57-104 (146)
360 1kgs_A DRRD, DNA binding respo 22.3 1.3E+02 0.0044 25.8 5.7 38 141-178 40-84 (225)
361 3nva_A CTP synthase; rossman f 22.2 87 0.003 31.6 4.8 41 36-76 3-46 (535)
362 4fu0_A D-alanine--D-alanine li 22.2 49 0.0017 31.6 3.0 39 33-71 1-43 (357)
363 2q8p_A Iron-regulated surface 22.2 63 0.0022 28.9 3.7 34 143-176 56-90 (260)
364 3f5d_A Protein YDEA; unknow pr 22.2 74 0.0025 27.6 3.9 38 35-73 3-41 (206)
365 4hn9_A Iron complex transport 22.1 66 0.0023 30.2 3.9 34 143-176 112-145 (335)
366 1ybh_A Acetolactate synthase, 22.1 1.8E+02 0.0061 29.8 7.5 27 396-422 76-108 (590)
367 1sqs_A Conserved hypothetical 22.1 80 0.0027 28.0 4.3 37 35-71 1-41 (242)
368 2i87_A D-alanine-D-alanine lig 22.0 44 0.0015 32.0 2.6 39 34-72 2-44 (364)
369 2qv0_A Protein MRKE; structura 22.0 1.4E+02 0.0048 23.1 5.5 29 139-167 47-77 (143)
370 3zq6_A Putative arsenical pump 21.9 1E+02 0.0035 28.8 5.2 45 36-81 14-59 (324)
371 1zi8_A Carboxymethylenebutenol 21.8 1.2E+02 0.004 25.8 5.4 37 35-71 27-63 (236)
372 2hpv_A FMN-dependent NADH-azor 21.7 81 0.0028 27.0 4.2 37 35-71 1-44 (208)
373 3rof_A Low molecular weight pr 21.7 1.1E+02 0.0036 25.4 4.6 31 33-63 4-35 (158)
374 3q9s_A DNA-binding response re 21.6 1.3E+02 0.0044 26.6 5.7 39 140-178 74-118 (249)
375 4dqx_A Probable oxidoreductase 21.6 94 0.0032 28.2 4.8 33 37-72 28-60 (277)
376 1oi4_A Hypothetical protein YH 21.5 1.7E+02 0.0059 24.7 6.2 39 34-73 22-60 (193)
377 3euw_A MYO-inositol dehydrogen 21.5 4.9E+02 0.017 24.1 10.7 110 316-447 7-124 (344)
378 3cky_A 2-hydroxymethyl glutara 21.4 91 0.0031 28.5 4.7 33 34-71 3-35 (301)
379 1yb4_A Tartronic semialdehyde 21.4 64 0.0022 29.5 3.6 32 34-70 2-33 (295)
380 3bfv_A CAPA1, CAPB2, membrane 21.4 98 0.0034 28.1 4.8 42 34-75 80-123 (271)
381 1k68_A Phytochrome response re 21.4 1.5E+02 0.0053 22.5 5.6 33 146-178 54-95 (140)
382 1js1_X Transcarbamylase; alpha 21.3 94 0.0032 29.2 4.6 38 36-73 169-206 (324)
383 2z1m_A GDP-D-mannose dehydrata 21.3 86 0.0029 29.1 4.6 34 35-72 3-36 (345)
384 4g65_A TRK system potassium up 21.2 31 0.0011 34.5 1.4 34 34-72 2-35 (461)
385 2vzf_A NADH-dependent FMN redu 21.1 93 0.0032 26.5 4.4 37 35-71 2-42 (197)
386 3ih5_A Electron transfer flavo 21.1 70 0.0024 28.1 3.5 111 35-175 3-122 (217)
387 2l82_A Designed protein OR32; 21.1 1.8E+02 0.0063 21.9 5.2 35 316-354 3-37 (162)
388 4eg0_A D-alanine--D-alanine li 21.0 1.5E+02 0.0051 27.4 6.2 39 35-73 13-55 (317)
389 3n0v_A Formyltetrahydrofolate 21.0 4.8E+02 0.016 23.8 10.6 107 33-177 88-197 (286)
390 3md9_A Hemin-binding periplasm 21.0 81 0.0028 28.0 4.2 33 143-175 55-89 (255)
391 4hkt_A Inositol 2-dehydrogenas 21.0 4.8E+02 0.016 23.9 9.9 109 316-447 6-122 (331)
392 2q37_A OHCU decarboxylase; 2-O 20.9 2.4E+02 0.0081 23.9 6.7 54 428-490 118-171 (181)
393 3sxp_A ADP-L-glycero-D-mannohe 20.9 1.5E+02 0.0051 27.8 6.3 36 33-72 8-45 (362)
394 3jte_A Response regulator rece 20.9 2.8E+02 0.0097 21.1 8.3 47 414-471 76-122 (143)
395 3guy_A Short-chain dehydrogena 20.8 75 0.0026 27.7 3.8 34 36-72 1-34 (230)
396 3jvi_A Protein tyrosine phosph 20.8 74 0.0025 26.4 3.5 31 33-63 2-33 (161)
397 3orf_A Dihydropteridine reduct 20.8 92 0.0032 27.6 4.5 36 34-72 20-55 (251)
398 4ggj_A Mitochondrial cardiolip 20.7 2E+02 0.0067 24.5 6.4 55 10-73 38-95 (196)
399 1o4v_A Phosphoribosylaminoimid 20.6 3.9E+02 0.013 22.6 12.0 142 314-495 13-165 (183)
400 1kjq_A GART 2, phosphoribosylg 20.6 1.5E+02 0.005 28.3 6.2 39 28-73 6-44 (391)
401 1ys7_A Transcriptional regulat 20.6 1.4E+02 0.0048 25.6 5.7 37 141-177 45-88 (233)
402 3v2g_A 3-oxoacyl-[acyl-carrier 20.5 2.3E+02 0.008 25.3 7.3 33 37-72 32-64 (271)
403 3to5_A CHEY homolog; alpha(5)b 20.4 3.2E+02 0.011 21.5 10.2 108 326-471 19-132 (134)
404 2zay_A Response regulator rece 20.4 1E+02 0.0035 24.1 4.3 39 139-177 44-91 (147)
405 2qv5_A AGR_C_5032P, uncharacte 20.4 2.4E+02 0.0082 25.5 7.0 35 137-173 145-182 (261)
406 3cg4_A Response regulator rece 20.3 1.6E+02 0.0054 22.7 5.5 34 34-71 6-39 (142)
407 1i3c_A Response regulator RCP1 20.3 1.7E+02 0.006 22.8 5.8 33 146-178 60-101 (149)
408 3gem_A Short chain dehydrogena 20.3 81 0.0028 28.3 4.0 34 37-73 28-61 (260)
409 2jk1_A HUPR, hydrogenase trans 20.3 2.6E+02 0.0088 21.4 6.7 47 415-471 72-118 (139)
410 2x7j_A 2-succinyl-5-enolpyruvy 20.2 2.2E+02 0.0074 29.3 7.7 79 331-422 33-127 (604)
411 2z04_A Phosphoribosylaminoimid 20.1 1.1E+02 0.0037 29.0 5.1 34 35-73 1-34 (365)
412 1xgk_A Nitrogen metabolite rep 20.1 92 0.0031 29.5 4.5 35 35-73 5-39 (352)
413 3lyu_A Putative hydrogenase; t 20.0 85 0.0029 25.2 3.7 32 36-69 19-50 (142)
414 2pk3_A GDP-6-deoxy-D-LYXO-4-he 20.0 99 0.0034 28.4 4.7 35 34-72 11-45 (321)
415 4h3k_B RNA polymerase II subun 20.0 4.3E+02 0.015 22.8 8.3 37 34-73 24-60 (214)
No 1
>3hbf_A Flavonoid 3-O-glucosyltransferase; glycosyltransferase, GT-B fold, GT1, phenylpropanoid metabolism; HET: UDP MYC; 2.10A {Medicago truncatula} SCOP: c.87.1.0 PDB: 3hbj_A*
Probab=100.00 E-value=3.7e-64 Score=512.52 Aligned_cols=437 Identities=30% Similarity=0.466 Sum_probs=340.7
Q ss_pred CCCCCCCcEEEEEcCCCccChHHHHHHHHHHHhCC--CeEEEEeCCCCccchhhhhhhhhccCCCeEEEEeeCCCccCCC
Q 010093 29 MGSEIPQLHVFFFPFMAHGHMIPIVDMAKLFATRG--VKASVITTPANAPYVSKSVERANELGIEMDVKTIKFPSVEAGL 106 (518)
Q Consensus 29 m~~~~~~~kIl~~~~~~~GH~~p~l~LA~~L~~rG--H~Vt~~~~~~~~~~~~~~~~~~~~~g~~i~~~~ip~~~~~~~l 106 (518)
|.. .++.||+++|+|++||++|++.||+.|+.+| +.|||++++.+...+.+... .....++|+.+| +++
T Consensus 8 M~~-~~~~hvv~~P~p~~GHi~P~l~Lak~L~~~g~~~~vT~~~t~~~~~~~~~~~~---~~~~~i~~~~ip-----dgl 78 (454)
T 3hbf_A 8 MNG-NNLLHVAVLAFPFGTHAAPLLSLVKKIATEAPKVTFSFFCTTTTNDTLFSRSN---EFLPNIKYYNVH-----DGL 78 (454)
T ss_dssp -----CCCEEEEECCCSSSSHHHHHHHHHHHHHHCTTSEEEEEECHHHHHHSCSSSS---CCCTTEEEEECC-----CCC
T ss_pred ccC-CCCCEEEEEcCCcccHHHHHHHHHHHHHhCCCCEEEEEEeCHHHHHhhhcccc---cCCCCceEEecC-----CCC
Confidence 554 3578999999999999999999999999999 99999999765544432210 012368888886 456
Q ss_pred CCCCCccccccchhhhhhHHHHHHHH-HhhHHHHHHHHhh--CCCCEEEecCCCccHHHHHHHcCCCeEEEecchHHHHH
Q 010093 107 PEGCENLDAITNEVNKGLIVKFFGAT-MKLQEPLEQLLQE--HKPDCLVADTFFPWATDAAAKFGIPRLVFHGTSFFSLC 183 (518)
Q Consensus 107 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~ll~~--~~pDlVI~D~~~~~~~~iA~~lgiP~v~~~~~~~~~~~ 183 (518)
+.+.+.... .. ..+..+...+ ..+.+.+.+++++ .++|+||+|.++.|+..+|+++|||++.++++++..+.
T Consensus 79 p~~~~~~~~-~~----~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~iI~D~~~~w~~~vA~~lgIP~~~f~t~~a~~~~ 153 (454)
T 3hbf_A 79 PKGYVSSGN-PR----EPIFLFIKAMQENFKHVIDEAVAETGKNITCLVTDAFFWFGADLAEEMHAKWVPLWTAGPHSLL 153 (454)
T ss_dssp CTTCCCCSC-TT----HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEETTCTTHHHHHHHTTCEEEEEECSCHHHHH
T ss_pred CCCccccCC-hH----HHHHHHHHHHHHHHHHHHHHHHhhcCCCCcEEEECCcchHHHHHHHHhCCCEEEEeCccHHHHH
Confidence 665544332 11 3344444433 3445556665554 57999999999999999999999999999999998888
Q ss_pred HHhhhhhcCCC-C--CCCCCCCccccCCCCCCccccCCCCCcccccCCCCchHHHHHHHhhhhcccccEEEEcCccccch
Q 010093 184 ASNCLALYEPH-K--KVSSDSEPFVMPHFPGEIKLTRNQLPDFVKQDMGDNDFSRLLKAIDDSDLRSYGVAVNSFYELEP 260 (518)
Q Consensus 184 ~~~~~~~~~~~-~--~~~~~~~~~~~p~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ns~~~L~~ 260 (518)
.+.+....... . ..........+||++. +..++++.++.. .....+..+..+.......++++++||+++||+
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~iPg~p~---~~~~dlp~~~~~-~~~~~~~~~~~~~~~~~~~~~~vl~ns~~eLE~ 229 (454)
T 3hbf_A 154 THVYTDLIREKTGSKEVHDVKSIDVLPGFPE---LKASDLPEGVIK-DIDVPFATMLHKMGLELPRANAVAINSFATIHP 229 (454)
T ss_dssp HHHTHHHHHHTCCHHHHTTSSCBCCSTTSCC---BCGGGSCTTSSS-CTTSHHHHHHHHHHHHGGGSSCEEESSCGGGCH
T ss_pred HHHhhHHHHhhcCCCccccccccccCCCCCC---cChhhCchhhcc-CCchHHHHHHHHHHHhhccCCEEEECChhHhCH
Confidence 77765422111 0 0011122234788875 677788876322 222245666677777788899999999999999
Q ss_pred HHHHHHHHhhCCcEEEeCccccCCcCchhhhhcCCCCCcChhHHhHhhhcCCCCcEEEEecCCcccCCHHHHHHHHHHHH
Q 010093 261 AYADHYRKALGRRAWHIGPVSLCNRNFEDKALRGKQASIDELECLKWLNSKQPYSVVYVCFGSLANFTSAQLMEIATGLE 340 (518)
Q Consensus 261 ~~~~~~~~~~~~~v~~vGpl~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~vIyvslGS~~~~~~~~~~~l~~al~ 340 (518)
++++.++..+ +++++|||++...... ....+.++.+||+.++++++|||||||+...+.+++.+++.+++
T Consensus 230 ~~~~~~~~~~-~~v~~vGPl~~~~~~~---------~~~~~~~~~~wLd~~~~~~vVyvsfGS~~~~~~~~~~el~~~l~ 299 (454)
T 3hbf_A 230 LIENELNSKF-KLLLNVGPFNLTTPQR---------KVSDEHGCLEWLDQHENSSVVYISFGSVVTPPPHELTALAESLE 299 (454)
T ss_dssp HHHHHHHTTS-SCEEECCCHHHHSCCS---------CCCCTTCHHHHHHTSCTTCEEEEECCSSCCCCHHHHHHHHHHHH
T ss_pred HHHHHHHhcC-CCEEEECCcccccccc---------cccchHHHHHHHhcCCCCceEEEecCCCCcCCHHHHHHHHHHHH
Confidence 9988887665 7999999998643211 01135679999999888999999999999988999999999999
Q ss_pred hCCCcEEEEEcCCCCCCCCCCCCCCChhHHHHHhcCCCcEeecCccHHHhhccCCCcccccccCchhHHHHHHhCCceec
Q 010093 341 ASGRNFIWVVSKNKNDGGEGGNEDWLPEGFEKRMEGKGLIIRGWAPQVLILDHEAVGGFVTHCGWNSTLEAVAAGVPLVT 420 (518)
Q Consensus 341 ~~~~~~i~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~nv~~~~~~pq~~lL~~~~~~~~ItHgG~~s~~eal~~GvP~l~ 420 (518)
.++++|||+++... .+.+|++|..+. ++|+++++|+||.++|+|+++++||||||+||++||+++|||||+
T Consensus 300 ~~~~~flw~~~~~~--------~~~lp~~~~~~~-~~~~~vv~w~Pq~~vL~h~~v~~fvtH~G~~S~~Eal~~GvP~i~ 370 (454)
T 3hbf_A 300 ECGFPFIWSFRGDP--------KEKLPKGFLERT-KTKGKIVAWAPQVEILKHSSVGVFLTHSGWNSVLECIVGGVPMIS 370 (454)
T ss_dssp HHCCCEEEECCSCH--------HHHSCTTHHHHT-TTTEEEESSCCHHHHHHSTTEEEEEECCCHHHHHHHHHHTCCEEE
T ss_pred hCCCeEEEEeCCcc--------hhcCCHhHHhhc-CCceEEEeeCCHHHHHhhcCcCeEEecCCcchHHHHHHcCCCEec
Confidence 99999999998643 112777776554 578999999999999999999999999999999999999999999
Q ss_pred CCcccccchhHHHHHHh-hhcceeeccccccccccCccChHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHhcCCCc
Q 010093 421 WPVAAEQFYNEKMVNEI-LKIGVGVGIQKWCRIVGDFVKRETIEKAVNEIMVGDRAEEMRSRAKALGKMAKRAVENGGSS 499 (518)
Q Consensus 421 ~P~~~DQ~~na~~v~e~-~G~G~~l~~~~~~~~~~~~~~~~~l~~av~~ll~~~~~~~~~~~a~~l~~~~~~~~~~~g~~ 499 (518)
+|++.||+.||++++ + +|+|+.+... .+++++|.++|+++|++++.++||++|+++++++++++.+|||+
T Consensus 371 ~P~~~DQ~~Na~~v~-~~~g~Gv~l~~~--------~~~~~~l~~av~~ll~~~~~~~~r~~a~~l~~~~~~a~~~gGsS 441 (454)
T 3hbf_A 371 RPFFGDQGLNTILTE-SVLEIGVGVDNG--------VLTKESIKKALELTMSSEKGGIMRQKIVKLKESAFKAVEQNGTS 441 (454)
T ss_dssp CCCSTTHHHHHHHHH-TTSCSEEECGGG--------SCCHHHHHHHHHHHHSSHHHHHHHHHHHHHHHHHHHHTSTTSHH
T ss_pred CcccccHHHHHHHHH-HhhCeeEEecCC--------CCCHHHHHHHHHHHHCCChHHHHHHHHHHHHHHHHHhhccCCCH
Confidence 999999999999995 7 6999999765 79999999999999983233489999999999999999999999
Q ss_pred HHHHHHHHHHHH
Q 010093 500 YSDLSALIEELR 511 (518)
Q Consensus 500 ~~~~~~~~~~~~ 511 (518)
+.++++||+++.
T Consensus 442 ~~~l~~~v~~i~ 453 (454)
T 3hbf_A 442 AMDFTTLIQIVT 453 (454)
T ss_dssp HHHHHHHHHHHT
T ss_pred HHHHHHHHHHHh
Confidence 999999999874
No 2
>2vch_A Hydroquinone glucosyltransferase; glycosyltransferase, N-glucosyltransferase, UDP-glucose- dependent, plant glycosyltransferase; HET: UDP; 1.45A {Arabidopsis thaliana} SCOP: c.87.1.10 PDB: 2vce_A* 2vg8_A*
Probab=100.00 E-value=3.6e-60 Score=491.27 Aligned_cols=448 Identities=27% Similarity=0.448 Sum_probs=324.2
Q ss_pred CCCcEEEEEcCCCccChHHHHHHHHHHHhC-CCeEEEEeCCC--CccchhhhhhhhhccCCCeEEEEeeCCCccCCCCCC
Q 010093 33 IPQLHVFFFPFMAHGHMIPIVDMAKLFATR-GVKASVITTPA--NAPYVSKSVERANELGIEMDVKTIKFPSVEAGLPEG 109 (518)
Q Consensus 33 ~~~~kIl~~~~~~~GH~~p~l~LA~~L~~r-GH~Vt~~~~~~--~~~~~~~~~~~~~~~g~~i~~~~ip~~~~~~~l~~~ 109 (518)
.+++||+++|+|+.||++|++.||++|++| ||+|||++++. +...+..... ..+.+++|+.+|... .+..
T Consensus 4 ~~~~~vl~~p~p~~GHv~P~l~La~~L~~r~Gh~Vt~~t~~~~~~~~~~~~~~~---~~~~~i~~~~l~~~~----~~~~ 76 (480)
T 2vch_A 4 SKTPHVAIIPSPGMGHLIPLVEFAKRLVHLHGLTVTFVIAGEGPPSKAQRTVLD---SLPSSISSVFLPPVD----LTDL 76 (480)
T ss_dssp --CCEEEEECCSCHHHHHHHHHHHHHHHHHHCCEEEEEECCSSSCC-CHHHHHC----CCTTEEEEECCCCC----CTTS
T ss_pred CCCcEEEEecCcchhHHHHHHHHHHHHHhCCCCEEEEEECCCcchhhhhhhhcc---ccCCCceEEEcCCCC----CCCC
Confidence 466899999999999999999999999998 99999999987 3444443100 002368888876421 1111
Q ss_pred CCccccccchhhhhhHHHHHHHHHhhHHHHHHHHhh----CCC-CEEEecCCCccHHHHHHHcCCCeEEEecchHHHHHH
Q 010093 110 CENLDAITNEVNKGLIVKFFGATMKLQEPLEQLLQE----HKP-DCLVADTFFPWATDAAAKFGIPRLVFHGTSFFSLCA 184 (518)
Q Consensus 110 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~----~~p-DlVI~D~~~~~~~~iA~~lgiP~v~~~~~~~~~~~~ 184 (518)
... . ..+..+......+.+.+++++++ .++ |+||+|.++.|+..+|+++|||++.++++++.....
T Consensus 77 -~~~-----~---~~~~~~~~~~~~~~~~l~~ll~~~~~~~~~pd~vI~D~~~~~~~~vA~~lgiP~v~~~~~~~~~~~~ 147 (480)
T 2vch_A 77 -SSS-----T---RIESRISLTVTRSNPELRKVFDSFVEGGRLPTALVVDLFGTDAFDVAVEFHVPPYIFYPTTANVLSF 147 (480)
T ss_dssp -CTT-----C---CHHHHHHHHHHTTHHHHHHHHHHHHHTTCCCSEEEECTTCGGGHHHHHHTTCCEEEEECSCHHHHHH
T ss_pred -CCc-----h---hHHHHHHHHHHhhhHHHHHHHHHhccCCCCCeEEEECCcchhHHHHHHHcCCCEEEEECccHHHHHH
Confidence 000 0 12222333344455666666665 478 999999998899999999999999999998877666
Q ss_pred HhhhhhcCC--CCCCCCCCCccccCCCCCCccccCCCCCcccccCCCCchHHHHHHHhhhhcccccEEEEcCccccchHH
Q 010093 185 SNCLALYEP--HKKVSSDSEPFVMPHFPGEIKLTRNQLPDFVKQDMGDNDFSRLLKAIDDSDLRSYGVAVNSFYELEPAY 262 (518)
Q Consensus 185 ~~~~~~~~~--~~~~~~~~~~~~~p~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ns~~~L~~~~ 262 (518)
+.+++.... .........+..+|+++. +...+++... ..........+.+.....+...++++|++.+|+++.
T Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~~~Pg~~p---~~~~~l~~~~--~~~~~~~~~~~~~~~~~~~~~~g~~~nt~~ele~~~ 222 (480)
T 2vch_A 148 FLHLPKLDETVSCEFRELTEPLMLPGCVP---VAGKDFLDPA--QDRKDDAYKWLLHNTKRYKEAEGILVNTFFELEPNA 222 (480)
T ss_dssp HHHHHHHHHHCCSCGGGCSSCBCCTTCCC---BCGGGSCGGG--SCTTSHHHHHHHHHHHHGGGCSEEEESCCTTTSHHH
T ss_pred HHHHHHHHhcCCCcccccCCcccCCCCCC---CChHHCchhh--hcCCchHHHHHHHHHHhcccCCEEEEcCHHHHhHHH
Confidence 554432110 000000011223455543 3333344331 111112333333444556677899999999999888
Q ss_pred HHHHHHhh--CCcEEEeCccccCCcCchhhhhcCCCCCcChhHHhHhhhcCCCCcEEEEecCCcccCCHHHHHHHHHHHH
Q 010093 263 ADHYRKAL--GRRAWHIGPVSLCNRNFEDKALRGKQASIDELECLKWLNSKQPYSVVYVCFGSLANFTSAQLMEIATGLE 340 (518)
Q Consensus 263 ~~~~~~~~--~~~v~~vGpl~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~vIyvslGS~~~~~~~~~~~l~~al~ 340 (518)
...+.... .+++++|||+........ .+..+.++.+|++.++++++|||||||+...+.+.+.+++++++
T Consensus 223 ~~~l~~~~~~~~~v~~vGpl~~~~~~~~--------~~~~~~~~~~wLd~~~~~~vvyvs~GS~~~~~~~~~~~~~~al~ 294 (480)
T 2vch_A 223 IKALQEPGLDKPPVYPVGPLVNIGKQEA--------KQTEESECLKWLDNQPLGSVLYVSFGSGGTLTCEQLNELALGLA 294 (480)
T ss_dssp HHHHHSCCTTCCCEEECCCCCCCSCSCC-------------CHHHHHHHTSCTTCEEEEECTTTCCCCHHHHHHHHHHHH
T ss_pred HHHHHhcccCCCcEEEEecccccccccc--------CccchhHHHHHhcCCCCCceEEEecccccCCCHHHHHHHHHHHH
Confidence 77776421 268999999976432100 01135689999999878899999999999888999999999999
Q ss_pred hCCCcEEEEEcCCCCCC--------CCCCCCCCChhHHHHHhcCCCcEeecCccHHHhhccCCCcccccccCchhHHHHH
Q 010093 341 ASGRNFIWVVSKNKNDG--------GEGGNEDWLPEGFEKRMEGKGLIIRGWAPQVLILDHEAVGGFVTHCGWNSTLEAV 412 (518)
Q Consensus 341 ~~~~~~i~~~~~~~~~~--------~~~~~~~~lp~~~~~~~~~~nv~~~~~~pq~~lL~~~~~~~~ItHgG~~s~~eal 412 (518)
.++++|||+++.....+ +..++...+|++|.++.+..++++.+|+||.+||+|++|++||||||+||++||+
T Consensus 295 ~~~~~~lw~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~g~~v~~w~Pq~~vL~h~~v~~fvtHgG~~S~~Eal 374 (480)
T 2vch_A 295 DSEQRFLWVIRSPSGIANSSYFDSHSQTDPLTFLPPGFLERTKKRGFVIPFWAPQAQVLAHPSTGGFLTHCGWNSTLESV 374 (480)
T ss_dssp HTTCEEEEEECCCCSSTTTTTTCC--CSCGGGGSCTTHHHHTTTTEEEEESCCCHHHHHHSTTEEEEEECCCHHHHHHHH
T ss_pred hcCCcEEEEECCccccccccccccccccchhhhcCHHHHHHhCCCeEEEeCccCHHHHhCCCCcCeEEecccchhHHHHH
Confidence 99999999998643000 0012222478888777666677777799999999999999999999999999999
Q ss_pred HhCCceecCCcccccchhHHHHHHhhhcceeeccccccccccCccChHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHH
Q 010093 413 AAGVPLVTWPVAAEQFYNEKMVNEILKIGVGVGIQKWCRIVGDFVKRETIEKAVNEIMVGDRAEEMRSRAKALGKMAKRA 492 (518)
Q Consensus 413 ~~GvP~l~~P~~~DQ~~na~~v~e~~G~G~~l~~~~~~~~~~~~~~~~~l~~av~~ll~~~~~~~~~~~a~~l~~~~~~~ 492 (518)
++|||||++|++.||+.||+++++++|+|+.+... +++.+++++|.++|+++|+++++++||++|++++++++++
T Consensus 375 ~~GvP~i~~P~~~DQ~~na~~l~~~~G~g~~l~~~-----~~~~~~~~~l~~av~~vl~~~~~~~~r~~a~~l~~~~~~a 449 (480)
T 2vch_A 375 VSGIPLIAWPLYAEQKMNAVLLSEDIRAALRPRAG-----DDGLVRREEVARVVKGLMEGEEGKGVRNKMKELKEAACRV 449 (480)
T ss_dssp HHTCCEEECCCSTTHHHHHHHHHHTTCCEECCCCC-----TTSCCCHHHHHHHHHHHHTSTHHHHHHHHHHHHHHHHHHH
T ss_pred HcCCCEEeccccccchHHHHHHHHHhCeEEEeecc-----cCCccCHHHHHHHHHHHhcCcchHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999964599999999652 1236899999999999998666789999999999999999
Q ss_pred HhcCCCcHHHHHHHHHHHHhhh
Q 010093 493 VENGGSSYSDLSALIEELRLSR 514 (518)
Q Consensus 493 ~~~~g~~~~~~~~~~~~~~~~~ 514 (518)
+.+||++++++++||+.+....
T Consensus 450 ~~~gGss~~~~~~~v~~~~~~~ 471 (480)
T 2vch_A 450 LKDDGTSTKALSLVALKWKAHK 471 (480)
T ss_dssp TSTTSHHHHHHHHHHHHHHHHH
T ss_pred HhcCCCHHHHHHHHHHHHHHhH
Confidence 9999999999999999998643
No 3
>2pq6_A UDP-glucuronosyl/UDP-glucosyltransferase; glycosylation, isoflavonoid, uridine diphosphate glycosyltransferase; 2.10A {Medicago truncatula} SCOP: c.87.1.10
Probab=100.00 E-value=8.9e-60 Score=489.92 Aligned_cols=447 Identities=28% Similarity=0.512 Sum_probs=316.7
Q ss_pred CCcEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCCCCccchhhhhhhhhccC-CCeEEEEeeCCCccCCCCCCCCc
Q 010093 34 PQLHVFFFPFMAHGHMIPIVDMAKLFATRGVKASVITTPANAPYVSKSVERANELG-IEMDVKTIKFPSVEAGLPEGCEN 112 (518)
Q Consensus 34 ~~~kIl~~~~~~~GH~~p~l~LA~~L~~rGH~Vt~~~~~~~~~~~~~~~~~~~~~g-~~i~~~~ip~~~~~~~l~~~~~~ 112 (518)
+++||+++|+|+.||++|++.||++|++|||+|||++++.+...+.+........+ .+++|+.+| ++++.....
T Consensus 7 ~~~~vl~~p~p~~GHi~P~l~La~~L~~rG~~VT~v~t~~~~~~~~~~~~~~~~~~~~~i~~~~l~-----~~lp~~~~~ 81 (482)
T 2pq6_A 7 RKPHVVMIPYPVQGHINPLFKLAKLLHLRGFHITFVNTEYNHKRLLKSRGPKAFDGFTDFNFESIP-----DGLTPMEGD 81 (482)
T ss_dssp -CCEEEEECCSSHHHHHHHHHHHHHHHHTTCEEEEEEEHHHHHHHC------------CEEEEEEC-----CCCC-----
T ss_pred CCCEEEEecCccchhHHHHHHHHHHHHhCCCeEEEEeCCchhhhhccccccccccCCCceEEEECC-----CCCCCcccc
Confidence 45799999999999999999999999999999999999876655433211000011 267888876 234431000
Q ss_pred cccccchhhhhhHHHHHHHH-HhhHHHHHHHHhh-------CCCCEEEecCCCccHHHHHHHcCCCeEEEecchHHHHHH
Q 010093 113 LDAITNEVNKGLIVKFFGAT-MKLQEPLEQLLQE-------HKPDCLVADTFFPWATDAAAKFGIPRLVFHGTSFFSLCA 184 (518)
Q Consensus 113 ~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~ll~~-------~~pDlVI~D~~~~~~~~iA~~lgiP~v~~~~~~~~~~~~ 184 (518)
.. .. ..+..+.... ..+.+.+++++++ .+||+||+|.++.|+..+|+++|||++.++++++.....
T Consensus 82 ~~-~~-----~~~~~~~~~~~~~~~~~l~~ll~~l~~~~~~~~~d~vI~D~~~~~~~~vA~~lgiP~v~~~~~~~~~~~~ 155 (482)
T 2pq6_A 82 GD-VS-----QDVPTLCQSVRKNFLKPYCELLTRLNHSTNVPPVTCLVSDCCMSFTIQAAEEFELPNVLYFSSSACSLLN 155 (482)
T ss_dssp ----------CCHHHHHHHHTTSSHHHHHHHHHHHHTCSSSCCCCEEEEETTCTHHHHHHHHTTCCEEEEECSCHHHHHH
T ss_pred cC-cc-----hhHHHHHHHHHHHhhHHHHHHHHHHhhhccCCCceEEEECCcchhHHHHHHHcCCCEEEEecccHHHHHH
Confidence 00 00 1111222222 3344555555542 589999999999999999999999999999998877665
Q ss_pred Hhhhhh-----cCCCCCCC--CC---CC-ccccCCCCCCccccCCCCCcccccCCCCchHHHHHHHhhhhcccccEEEEc
Q 010093 185 SNCLAL-----YEPHKKVS--SD---SE-PFVMPHFPGEIKLTRNQLPDFVKQDMGDNDFSRLLKAIDDSDLRSYGVAVN 253 (518)
Q Consensus 185 ~~~~~~-----~~~~~~~~--~~---~~-~~~~p~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~n 253 (518)
+.+++. +.+..... .. .. ...+|+++. +...+++.++........+..++........+.+++++|
T Consensus 156 ~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vl~n 232 (482)
T 2pq6_A 156 VMHFRSFVERGIIPFKDESYLTNGCLETKVDWIPGLKN---FRLKDIVDFIRTTNPNDIMLEFFIEVADRVNKDTTILLN 232 (482)
T ss_dssp HTTHHHHHHTTCSSCSSGGGGTSSGGGCBCCSSTTCCS---CBGGGSCGGGCCSCTTCHHHHHHHHHHHTCCTTCCEEES
T ss_pred HHHHHHHHhcCCCCCccccccccccccCccccCCCCCC---CchHHCchhhccCCcccHHHHHHHHHHHhhccCCEEEEc
Confidence 544332 11111000 00 00 012344432 233344444211111223444444555666788999999
Q ss_pred CccccchHHHHHHHHhhCCcEEEeCccccC-CcCchhhhhcC--CCCCcChhHHhHhhhcCCCCcEEEEecCCcccCCHH
Q 010093 254 SFYELEPAYADHYRKALGRRAWHIGPVSLC-NRNFEDKALRG--KQASIDELECLKWLNSKQPYSVVYVCFGSLANFTSA 330 (518)
Q Consensus 254 s~~~L~~~~~~~~~~~~~~~v~~vGpl~~~-~~~~~~~~~~~--~~~~~~~~~l~~~l~~~~~~~vIyvslGS~~~~~~~ 330 (518)
++++|++++++.++..+ +++++|||++.. +.......... ...+..+.++.+|++.++++++|||||||+...+.+
T Consensus 233 t~~~le~~~~~~~~~~~-~~v~~VGPl~~~~~~~~~~~~~~~~~~~l~~~~~~~~~wld~~~~~~vv~vs~GS~~~~~~~ 311 (482)
T 2pq6_A 233 TFNELESDVINALSSTI-PSIYPIGPLPSLLKQTPQIHQLDSLDSNLWKEDTECLDWLESKEPGSVVYVNFGSTTVMTPE 311 (482)
T ss_dssp SCGGGGHHHHHHHHTTC-TTEEECCCHHHHHHTSTTGGGGCC---------CHHHHHHTTSCTTCEEEEECCSSSCCCHH
T ss_pred ChHHHhHHHHHHHHHhC-CcEEEEcCCcccccccccccccccccccccccchHHHHHHhcCCCCceEEEecCCcccCCHH
Confidence 99999999888888777 799999999763 11100000000 001112457899999987889999999999888888
Q ss_pred HHHHHHHHHHhCCCcEEEEEcCCCCCCCCCCCCCCChhHHHHHhcCCCcEeecCccHHHhhccCCCcccccccCchhHHH
Q 010093 331 QLMEIATGLEASGRNFIWVVSKNKNDGGEGGNEDWLPEGFEKRMEGKGLIIRGWAPQVLILDHEAVGGFVTHCGWNSTLE 410 (518)
Q Consensus 331 ~~~~l~~al~~~~~~~i~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~nv~~~~~~pq~~lL~~~~~~~~ItHgG~~s~~e 410 (518)
.+.+++.+|+.++++|||+++... ..++.. .+|++|..+. ++|+++++|+||.++|+|+++++||||||+||++|
T Consensus 312 ~~~~~~~~l~~~~~~~l~~~~~~~---~~~~~~-~l~~~~~~~~-~~~~~v~~~~pq~~~L~h~~~~~~vth~G~~s~~E 386 (482)
T 2pq6_A 312 QLLEFAWGLANCKKSFLWIIRPDL---VIGGSV-IFSSEFTNEI-ADRGLIASWCPQDKVLNHPSIGGFLTHCGWNSTTE 386 (482)
T ss_dssp HHHHHHHHHHHTTCEEEEECCGGG---STTTGG-GSCHHHHHHH-TTTEEEESCCCHHHHHTSTTEEEEEECCCHHHHHH
T ss_pred HHHHHHHHHHhcCCcEEEEEcCCc---cccccc-cCcHhHHHhc-CCCEEEEeecCHHHHhcCCCCCEEEecCCcchHHH
Confidence 899999999999999999997542 000111 2677776554 67999999999999999999999999999999999
Q ss_pred HHHhCCceecCCcccccchhHHHHHHhhhcceeeccccccccccCccChHHHHHHHHHHhcCChHH---HHHHHHHHHHH
Q 010093 411 AVAAGVPLVTWPVAAEQFYNEKMVNEILKIGVGVGIQKWCRIVGDFVKRETIEKAVNEIMVGDRAE---EMRSRAKALGK 487 (518)
Q Consensus 411 al~~GvP~l~~P~~~DQ~~na~~v~e~~G~G~~l~~~~~~~~~~~~~~~~~l~~av~~ll~~~~~~---~~~~~a~~l~~ 487 (518)
|+++|||||++|++.||+.||+++++++|+|+.+. . .+++++|.++|+++|+ ++ +||++|+++++
T Consensus 387 al~~GvP~i~~P~~~dQ~~na~~~~~~~G~g~~l~-~--------~~~~~~l~~~i~~ll~---~~~~~~~r~~a~~l~~ 454 (482)
T 2pq6_A 387 SICAGVPMLCWPFFADQPTDCRFICNEWEIGMEID-T--------NVKREELAKLINEVIA---GDKGKKMKQKAMELKK 454 (482)
T ss_dssp HHHHTCCEEECCCSTTHHHHHHHHHHTSCCEEECC-S--------SCCHHHHHHHHHHHHT---SHHHHHHHHHHHHHHH
T ss_pred HHHcCCCEEecCcccchHHHHHHHHHHhCEEEEEC-C--------CCCHHHHHHHHHHHHc---CCcHHHHHHHHHHHHH
Confidence 99999999999999999999999943799999997 4 6999999999999998 55 79999999999
Q ss_pred HHHHHHhcCCCcHHHHHHHHHHHHh
Q 010093 488 MAKRAVENGGSSYSDLSALIEELRL 512 (518)
Q Consensus 488 ~~~~~~~~~g~~~~~~~~~~~~~~~ 512 (518)
++++++.+||+++.++++||+++.+
T Consensus 455 ~~~~a~~~gGss~~~l~~~v~~~~~ 479 (482)
T 2pq6_A 455 KAEENTRPGGCSYMNLNKVIKDVLL 479 (482)
T ss_dssp HHHHHTSTTCHHHHHHHHHHHHTTC
T ss_pred HHHHHHhcCCcHHHHHHHHHHHHHh
Confidence 9999999999999999999998754
No 4
>2acv_A Triterpene UDP-glucosyl transferase UGT71G1; glycosyltransferase; HET: UDP; 2.00A {Medicago truncatula} SCOP: c.87.1.10 PDB: 2acw_A*
Probab=100.00 E-value=3.4e-58 Score=474.73 Aligned_cols=437 Identities=27% Similarity=0.418 Sum_probs=321.0
Q ss_pred CCcEEEEEcCCCccChHHHHHHHHHHHhC--CCeEEEEeCCCCcc-chhhhhhhhhccCCCeEEEEeeCCCccCCCCCCC
Q 010093 34 PQLHVFFFPFMAHGHMIPIVDMAKLFATR--GVKASVITTPANAP-YVSKSVERANELGIEMDVKTIKFPSVEAGLPEGC 110 (518)
Q Consensus 34 ~~~kIl~~~~~~~GH~~p~l~LA~~L~~r--GH~Vt~~~~~~~~~-~~~~~~~~~~~~g~~i~~~~ip~~~~~~~l~~~~ 110 (518)
+++||+++|+|+.||++|++.||+.|++| ||+|||++++.+.. .+..........+.+++|+.+|.. .++. .
T Consensus 8 ~~~~vv~~p~p~~GHi~P~l~La~~L~~r~pG~~Vt~v~t~~~~~~~~~~~~~~~~~~~~~i~~~~lp~~----~~~~-~ 82 (463)
T 2acv_A 8 KNSELIFIPAPGIGHLASALEFAKLLTNHDKNLYITVFCIKFPGMPFADSYIKSVLASQPQIQLIDLPEV----EPPP-Q 82 (463)
T ss_dssp HCEEEEEECCSSTTTHHHHHHHHHHHHHTCTTEEEEEEECCCTTCCCCHHHHHHHHCSCTTEEEEECCCC----CCCC-G
T ss_pred CCCEEEEEcCcccchHHHHHHHHHHHHhcCCCcEEEEEEcCCcchhhhhhhhhhcccCCCCceEEECCCC----CCCc-c
Confidence 45899999999999999999999999999 99999999987532 122211110112246888888632 1221 1
Q ss_pred CccccccchhhhhhHHHHHHHHHhhHHHHHHHHhh---CCCCEEEecCCCccHHHHHHHcCCCeEEEecchHHHHHHHhh
Q 010093 111 ENLDAITNEVNKGLIVKFFGATMKLQEPLEQLLQE---HKPDCLVADTFFPWATDAAAKFGIPRLVFHGTSFFSLCASNC 187 (518)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~---~~pDlVI~D~~~~~~~~iA~~lgiP~v~~~~~~~~~~~~~~~ 187 (518)
+... .. ..+ +........+.+++++++ .+||+||+|.++.|+..+|+++|||++.++++++.....+.+
T Consensus 83 ~~~~---~~---~~~--~~~~~~~~~~~~~~ll~~~~~~~~d~vI~D~~~~~~~~vA~~lgiP~v~~~~~~~~~~~~~~~ 154 (463)
T 2acv_A 83 ELLK---SP---EFY--ILTFLESLIPHVKATIKTILSNKVVGLVLDFFCVSMIDVGNEFGIPSYLFLTSNVGFLSLMLS 154 (463)
T ss_dssp GGGG---SH---HHH--HHHHHHHTHHHHHHHHHHHCCTTEEEEEEEGGGGGGHHHHHHTTCCEEEEESSCHHHHHHHHH
T ss_pred cccC---Cc---cHH--HHHHHHhhhHHHHHHHHhccCCCCeEEEECCcchhHHHHHHHcCCCEEEEeCchHHHHHHHHH
Confidence 1011 11 111 334445556677777776 789999999998899999999999999999998887766655
Q ss_pred hhhcCCCCCCCCCCC---ccccCCC-CCCccccCCCCCcccccCCCCchHHHHHHHhhhhcccccEEEEcCccccchHHH
Q 010093 188 LALYEPHKKVSSDSE---PFVMPHF-PGEIKLTRNQLPDFVKQDMGDNDFSRLLKAIDDSDLRSYGVAVNSFYELEPAYA 263 (518)
Q Consensus 188 ~~~~~~~~~~~~~~~---~~~~p~l-~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ns~~~L~~~~~ 263 (518)
++............. +..+|++ +. +..++++... ... ......+.+.....+..+++++|++++|+++..
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~pg~~~~---~~~~~l~~~~--~~~-~~~~~~~~~~~~~~~~~~~~l~nt~~ele~~~~ 228 (463)
T 2acv_A 155 LKNRQIEEVFDDSDRDHQLLNIPGISNQ---VPSNVLPDAC--FNK-DGGYIAYYKLAERFRDTKGIIVNTFSDLEQSSI 228 (463)
T ss_dssp GGGSCTTCCCCCSSGGGCEECCTTCSSC---EEGGGSCHHH--HCT-TTHHHHHHHHHHHHTTSSEEEESCCHHHHHHHH
T ss_pred HHhhcccCCCCCccccCceeECCCCCCC---CChHHCchhh--cCC-chHHHHHHHHHHhcccCCEEEECCHHHHhHHHH
Confidence 543321111111111 3446676 43 3333444321 111 112233333445567788999999999999888
Q ss_pred HHHHHhh--CCcEEEeCccccCCcCchhhhhcCCCCCcChhHHhHhhhcCCCCcEEEEecCCcc-cCCHHHHHHHHHHHH
Q 010093 264 DHYRKAL--GRRAWHIGPVSLCNRNFEDKALRGKQASIDELECLKWLNSKQPYSVVYVCFGSLA-NFTSAQLMEIATGLE 340 (518)
Q Consensus 264 ~~~~~~~--~~~v~~vGpl~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~vIyvslGS~~-~~~~~~~~~l~~al~ 340 (518)
..+.... ++++++|||+......... . ..+..+.++.+|++..+++++|||||||+. ..+.+.+.+++++|+
T Consensus 229 ~~l~~~~~p~~~v~~vGpl~~~~~~~~~----~-~~~~~~~~~~~wl~~~~~~~vv~vs~GS~~~~~~~~~~~~~~~~l~ 303 (463)
T 2acv_A 229 DALYDHDEKIPPIYAVGPLLDLKGQPNP----K-LDQAQHDLILKWLDEQPDKSVVFLCFGSMGVSFGPSQIREIALGLK 303 (463)
T ss_dssp HHHHHHCTTSCCEEECCCCCCSSCCCBT----T-BCHHHHHHHHHHHHTSCTTCEEEEECCSSCCCCCHHHHHHHHHHHH
T ss_pred HHHHhccccCCcEEEeCCCccccccccc----c-cccccchhHHHHHhcCCCCceEEEEeccccccCCHHHHHHHHHHHH
Confidence 7777655 5799999999864310000 0 000135789999999888899999999999 788889999999999
Q ss_pred hCCCcEEEEEcCCCCCCCCCCCCCCChhHHHHHhc-CCCcEeecCccHHHhhccCCCcccccccCchhHHHHHHhCCcee
Q 010093 341 ASGRNFIWVVSKNKNDGGEGGNEDWLPEGFEKRME-GKGLIIRGWAPQVLILDHEAVGGFVTHCGWNSTLEAVAAGVPLV 419 (518)
Q Consensus 341 ~~~~~~i~~~~~~~~~~~~~~~~~~lp~~~~~~~~-~~nv~~~~~~pq~~lL~~~~~~~~ItHgG~~s~~eal~~GvP~l 419 (518)
..+++|||+++.+. +.+|++|..+.. ++|+++++|+||.++|.|+++++||||||+||++||+++|||||
T Consensus 304 ~~~~~~l~~~~~~~---------~~l~~~~~~~~~~~~~~~v~~w~pq~~vL~h~~~~~fvth~G~~s~~Eal~~GvP~i 374 (463)
T 2acv_A 304 HSGVRFLWSNSAEK---------KVFPEGFLEWMELEGKGMICGWAPQVEVLAHKAIGGFVSHCGWNSILESMWFGVPIL 374 (463)
T ss_dssp HHTCEEEEECCCCG---------GGSCTTHHHHHHHHCSEEEESSCCHHHHHHSTTEEEEEECCCHHHHHHHHHTTCCEE
T ss_pred hCCCcEEEEECCCc---------ccCChhHHHhhccCCCEEEEccCCHHHHhCCCccCeEEecCCchhHHHHHHcCCCee
Confidence 99999999998641 026666654431 45888999999999999999999999999999999999999999
Q ss_pred cCCcccccchhHHHHHHhhhcceeec-cccccccccC--ccChHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHhcC
Q 010093 420 TWPVAAEQFYNEKMVNEILKIGVGVG-IQKWCRIVGD--FVKRETIEKAVNEIMVGDRAEEMRSRAKALGKMAKRAVENG 496 (518)
Q Consensus 420 ~~P~~~DQ~~na~~v~e~~G~G~~l~-~~~~~~~~~~--~~~~~~l~~av~~ll~~~~~~~~~~~a~~l~~~~~~~~~~~ 496 (518)
++|++.||+.||+++++++|+|+.+. .. +++ .+++++|.++|+++|++ +++||++|+++++++++++.+|
T Consensus 375 ~~P~~~dQ~~Na~~lv~~~g~g~~l~~~~-----~~~~~~~~~~~l~~ai~~ll~~--~~~~r~~a~~l~~~~~~a~~~g 447 (463)
T 2acv_A 375 TWPIYAEQQLNAFRLVKEWGVGLGLRVDY-----RKGSDVVAAEEIEKGLKDLMDK--DSIVHKKVQEMKEMSRNAVVDG 447 (463)
T ss_dssp ECCCSTTHHHHHHHHHHTSCCEEESCSSC-----CTTCCCCCHHHHHHHHHHHTCT--TCTHHHHHHHHHHHHHHHTSTT
T ss_pred eccchhhhHHHHHHHHHHcCeEEEEeccc-----CCCCccccHHHHHHHHHHHHhc--cHHHHHHHHHHHHHHHHHHhcC
Confidence 99999999999999425999999983 11 012 58999999999999952 2589999999999999999999
Q ss_pred CCcHHHHHHHHHHH
Q 010093 497 GSSYSDLSALIEEL 510 (518)
Q Consensus 497 g~~~~~~~~~~~~~ 510 (518)
|+++.++++||+++
T Consensus 448 Gss~~~l~~~v~~~ 461 (463)
T 2acv_A 448 GSSLISVGKLIDDI 461 (463)
T ss_dssp SHHHHHHHHHHHHH
T ss_pred CcHHHHHHHHHHHh
Confidence 99999999999987
No 5
>2c1x_A UDP-glucose flavonoid 3-O glycosyltransferase; WINE, catalysis, glycosylation; HET: UDP B3P; 1.9A {Vitis vinifera} SCOP: c.87.1.10 PDB: 2c1z_A* 2c9z_A*
Probab=100.00 E-value=3.8e-58 Score=473.07 Aligned_cols=436 Identities=28% Similarity=0.435 Sum_probs=314.8
Q ss_pred CCCcEEEEEcCCCccChHHHHHHHHHHHhCCCe--EEEEeCCCCccchhhhhhhhhccCCCeEEEEeeCCCccCCCCCCC
Q 010093 33 IPQLHVFFFPFMAHGHMIPIVDMAKLFATRGVK--ASVITTPANAPYVSKSVERANELGIEMDVKTIKFPSVEAGLPEGC 110 (518)
Q Consensus 33 ~~~~kIl~~~~~~~GH~~p~l~LA~~L~~rGH~--Vt~~~~~~~~~~~~~~~~~~~~~g~~i~~~~ip~~~~~~~l~~~~ 110 (518)
++++||+++|+|+.||++|++.||+.|++|||. ||+++++.....+...... ..+.+++|+.++ ++++.+.
T Consensus 5 ~~~~hvv~~p~p~~GHi~P~l~la~~L~~rGh~v~vt~~~t~~~~~~~~~~~~~--~~~~~i~~~~i~-----~glp~~~ 77 (456)
T 2c1x_A 5 TTNPHVAVLAFPFSTHAAPLLAVVRRLAAAAPHAVFSFFSTSQSNASIFHDSMH--TMQCNIKSYDIS-----DGVPEGY 77 (456)
T ss_dssp --CCEEEEECCCSSSSHHHHHHHHHHHHHHCTTSEEEEEECHHHHHHHC---------CTTEEEEECC-----CCCCTTC
T ss_pred CCCCEEEEEcCcccchHHHHHHHHHHHHhCCCCeEEEEEeCchhHHHhhccccc--cCCCceEEEeCC-----CCCCCcc
Confidence 467899999999999999999999999999766 5778886433332221000 002367787775 2444433
Q ss_pred CccccccchhhhhhHHHHHHHH-HhhHHHHHHHHhh--CCCCEEEecCCCccHHHHHHHcCCCeEEEecchHHHHHHHhh
Q 010093 111 ENLDAITNEVNKGLIVKFFGAT-MKLQEPLEQLLQE--HKPDCLVADTFFPWATDAAAKFGIPRLVFHGTSFFSLCASNC 187 (518)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~ll~~--~~pDlVI~D~~~~~~~~iA~~lgiP~v~~~~~~~~~~~~~~~ 187 (518)
+... . .. ..+..+...+ ..+.+.+.+++++ .+||+||+|.++.|+..+|+++|||+|.++++++..+..+.+
T Consensus 78 ~~~~-~-~~---~~~~~~~~~~~~~~~~~l~~l~~~~~~~~d~vI~D~~~~~~~~vA~~lgiP~v~~~~~~~~~~~~~~~ 152 (456)
T 2c1x_A 78 VFAG-R-PQ---EDIELFTRAAPESFRQGMVMAVAETGRPVSCLVADAFIWFAADMAAEMGVAWLPFWTAGPNSLSTHVY 152 (456)
T ss_dssp CCCC-C-TT---HHHHHHHHHHHHHHHHHHHHHHHHHTCCCCEEEEETTSTTHHHHHHHHTCEEEEEECSCHHHHHHHHT
T ss_pred cccC-C-hH---HHHHHHHHHhHHHHHHHHHHHHhccCCCceEEEECCchHhHHHHHHHhCCCEEEEeCccHHHHHHHhh
Confidence 2111 1 11 3333333333 2233444444433 689999999999999999999999999999988776654433
Q ss_pred hhh---cCCCCC-CC-CCCCccccCCCCCCccccCCCCCcccccCCCCchHHHHHHHhhhhcccccEEEEcCccccchHH
Q 010093 188 LAL---YEPHKK-VS-SDSEPFVMPHFPGEIKLTRNQLPDFVKQDMGDNDFSRLLKAIDDSDLRSYGVAVNSFYELEPAY 262 (518)
Q Consensus 188 ~~~---~~~~~~-~~-~~~~~~~~p~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ns~~~L~~~~ 262 (518)
... ...... .. .......+|+++. +..++++..+.+......+..+..+.......++++++|++++|++++
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~pg~~~---~~~~~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~~vl~ns~~~le~~~ 229 (456)
T 2c1x_A 153 IDEIREKIGVSGIQGREDELLNFIPGMSK---VRFRDLQEGIVFGNLNSLFSRMLHRMGQVLPKATAVFINSFEELDDSL 229 (456)
T ss_dssp HHHHHHHHCSSCCTTCTTCBCTTSTTCTT---CBGGGSCTTTSSSCTTSHHHHHHHHHHHHGGGSSCEEESSCGGGCHHH
T ss_pred hHHHHhccCCcccccccccccccCCCCCc---ccHHhCchhhcCCCcccHHHHHHHHHHHhhhhCCEEEECChHHHhHHH
Confidence 221 100000 01 1111224567664 344445543111111123445555555556778899999999999988
Q ss_pred HHHHHHhhCCcEEEeCccccCCcCchhhhhcCCCCCcChhHHhHhhhcCCCCcEEEEecCCcccCCHHHHHHHHHHHHhC
Q 010093 263 ADHYRKALGRRAWHIGPVSLCNRNFEDKALRGKQASIDELECLKWLNSKQPYSVVYVCFGSLANFTSAQLMEIATGLEAS 342 (518)
Q Consensus 263 ~~~~~~~~~~~v~~vGpl~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~vIyvslGS~~~~~~~~~~~l~~al~~~ 342 (518)
.+.++..+ +++++|||+....... ....+.++.+|++..+++++|||||||....+.+.+.+++++++..
T Consensus 230 ~~~~~~~~-~~~~~vGpl~~~~~~~---------~~~~~~~~~~wl~~~~~~~vv~vs~GS~~~~~~~~~~~~~~~l~~~ 299 (456)
T 2c1x_A 230 TNDLKSKL-KTYLNIGPFNLITPPP---------VVPNTTGCLQWLKERKPTSVVYISFGTVTTPPPAEVVALSEALEAS 299 (456)
T ss_dssp HHHHHHHS-SCEEECCCHHHHC------------------CHHHHHHTSCTTCEEEEECCSSCCCCHHHHHHHHHHHHHH
T ss_pred HHHHHhcC-CCEEEecCcccCcccc---------cccchhhHHHHHhcCCCcceEEEecCccccCCHHHHHHHHHHHHhc
Confidence 88777766 6999999987643210 0112356899999887889999999999988889999999999999
Q ss_pred CCcEEEEEcCCCCCCCCCCCCCCChhHHHHHhcCCCcEeecCccHHHhhccCCCcccccccCchhHHHHHHhCCceecCC
Q 010093 343 GRNFIWVVSKNKNDGGEGGNEDWLPEGFEKRMEGKGLIIRGWAPQVLILDHEAVGGFVTHCGWNSTLEAVAAGVPLVTWP 422 (518)
Q Consensus 343 ~~~~i~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~nv~~~~~~pq~~lL~~~~~~~~ItHgG~~s~~eal~~GvP~l~~P 422 (518)
+++|||+++... ...+|++|..+. ++|+++++|+||.++|+|+++++||||||+||++||+++|||||++|
T Consensus 300 ~~~~lw~~~~~~--------~~~l~~~~~~~~-~~~~~v~~w~pq~~vL~h~~~~~fvth~G~~S~~Eal~~GvP~i~~P 370 (456)
T 2c1x_A 300 RVPFIWSLRDKA--------RVHLPEGFLEKT-RGYGMVVPWAPQAEVLAHEAVGAFVTHCGWNSLWESVAGGVPLICRP 370 (456)
T ss_dssp TCCEEEECCGGG--------GGGSCTTHHHHH-TTTEEEESCCCHHHHHTSTTEEEEEECCCHHHHHHHHHHTCCEEECC
T ss_pred CCeEEEEECCcc--------hhhCCHHHHhhc-CCceEEecCCCHHHHhcCCcCCEEEecCCcchHHHHHHhCceEEecC
Confidence 999999997643 112677775543 57999999999999999999999999999999999999999999999
Q ss_pred cccccchhHHHHHHhh-hcceeeccccccccccCccChHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHhcCCCcHH
Q 010093 423 VAAEQFYNEKMVNEIL-KIGVGVGIQKWCRIVGDFVKRETIEKAVNEIMVGDRAEEMRSRAKALGKMAKRAVENGGSSYS 501 (518)
Q Consensus 423 ~~~DQ~~na~~v~e~~-G~G~~l~~~~~~~~~~~~~~~~~l~~av~~ll~~~~~~~~~~~a~~l~~~~~~~~~~~g~~~~ 501 (518)
++.||+.||++++ +. |+|+.+... .+++++|.++|+++|++++.++||++|+++++.+++++.+|||++.
T Consensus 371 ~~~dQ~~Na~~l~-~~~g~g~~l~~~--------~~~~~~l~~~i~~ll~~~~~~~~r~~a~~l~~~~~~a~~~gGsS~~ 441 (456)
T 2c1x_A 371 FFGDQRLNGRMVE-DVLEIGVRIEGG--------VFTKSGLMSCFDQILSQEKGKKLRENLRALRETADRAVGPKGSSTE 441 (456)
T ss_dssp CSTTHHHHHHHHH-HTSCCEEECGGG--------SCCHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHTSTTCHHHH
T ss_pred ChhhHHHHHHHHH-HHhCeEEEecCC--------CcCHHHHHHHHHHHHCCCcHHHHHHHHHHHHHHHHHhhhcCCcHHH
Confidence 9999999999995 77 999999765 7999999999999998221238999999999999999999999999
Q ss_pred HHHHHHHHHH
Q 010093 502 DLSALIEELR 511 (518)
Q Consensus 502 ~~~~~~~~~~ 511 (518)
++++||+++.
T Consensus 442 ~l~~~v~~~~ 451 (456)
T 2c1x_A 442 NFITLVDLVS 451 (456)
T ss_dssp HHHHHHHHHT
T ss_pred HHHHHHHHHH
Confidence 9999999884
No 6
>2iya_A OLEI, oleandomycin glycosyltransferase; carbohydrate, glycosylation, enzyme, macrolide; HET: UDP ZIO; 1.7A {Streptomyces antibioticus}
Probab=100.00 E-value=1.2e-43 Score=363.99 Aligned_cols=403 Identities=18% Similarity=0.221 Sum_probs=267.1
Q ss_pred CCCcEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCCCCccchhhhhhhhhccCCCeEEEEeeCCCccCCCCCCCCc
Q 010093 33 IPQLHVFFFPFMAHGHMIPIVDMAKLFATRGVKASVITTPANAPYVSKSVERANELGIEMDVKTIKFPSVEAGLPEGCEN 112 (518)
Q Consensus 33 ~~~~kIl~~~~~~~GH~~p~l~LA~~L~~rGH~Vt~~~~~~~~~~~~~~~~~~~~~g~~i~~~~ip~~~~~~~l~~~~~~ 112 (518)
|+|+||+|+++++.||++|+++||++|+++||+|+|++++.+.+.+... +++|+.++. .++.+...
T Consensus 10 m~~~~Il~~~~~~~GHv~p~l~la~~L~~~Gh~V~~~~~~~~~~~~~~~---------g~~~~~~~~-----~~~~~~~~ 75 (424)
T 2iya_A 10 VTPRHISFFNIPGHGHVNPSLGIVQELVARGHRVSYAITDEFAAQVKAA---------GATPVVYDS-----ILPKESNP 75 (424)
T ss_dssp -CCCEEEEECCSCHHHHHHHHHHHHHHHHTTCEEEEEECGGGHHHHHHH---------TCEEEECCC-----CSCCTTCT
T ss_pred cccceEEEEeCCCCcccchHHHHHHHHHHCCCeEEEEeCHHHHHHHHhC---------CCEEEecCc-----cccccccc
Confidence 3578999999999999999999999999999999999998876655544 466766642 12221110
Q ss_pred cccccchhhhhhHHHHHHHHHhhHHHHHHHHhhCCCCEEEecCCCccHHHHHHHcCCCeEEEecchHHHHHHHhhhhhcC
Q 010093 113 LDAITNEVNKGLIVKFFGATMKLQEPLEQLLQEHKPDCLVADTFFPWATDAAAKFGIPRLVFHGTSFFSLCASNCLALYE 192 (518)
Q Consensus 113 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~~pDlVI~D~~~~~~~~iA~~lgiP~v~~~~~~~~~~~~~~~~~~~~ 192 (518)
...... .....+..+......+.+.+.+++++.+||+||+|.+..++..+|+++|||++.+++.+..............
T Consensus 76 ~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~l~~~~pD~VI~d~~~~~~~~~A~~lgIP~v~~~~~~~~~~~~~~~~~~~~ 154 (424)
T 2iya_A 76 EESWPE-DQESAMGLFLDEAVRVLPQLEDAYADDRPDLIVYDIASWPAPVLGRKWDIPFVQLSPTFVAYEGFEEDVPAVQ 154 (424)
T ss_dssp TCCCCS-SHHHHHHHHHHHHHHHHHHHHHHTTTSCCSEEEEETTCTHHHHHHHHHTCCEEEEESSCCCCTTHHHHSGGGS
T ss_pred hhhcch-hHHHHHHHHHHHHHHHHHHHHHHHhccCCCEEEEcCcccHHHHHHHhcCCCEEEEeccccccccccccccccc
Confidence 000000 0002233334444556677888888899999999998889999999999999999876531110000000000
Q ss_pred CCCCCCCCCCccccC-CCCCCccccCCCCCcccccCCCCchHHHHHHHh------hhhcccccEEEEcCccccchHHHHH
Q 010093 193 PHKKVSSDSEPFVMP-HFPGEIKLTRNQLPDFVKQDMGDNDFSRLLKAI------DDSDLRSYGVAVNSFYELEPAYADH 265 (518)
Q Consensus 193 ~~~~~~~~~~~~~~p-~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~l~ns~~~L~~~~~~~ 265 (518)
. ........+. .| +........ ...+.+ .++. ..+.....+. .......+.+++++..+++++.
T Consensus 155 ~-~~~~~~~~~~-~~~~~~~~~~~~-~~~~~~-~~~~--~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~l~~~~--- 225 (424)
T 2iya_A 155 D-PTADRGEEAA-APAGTGDAEEGA-EAEDGL-VRFF--TRLSAFLEEHGVDTPATEFLIAPNRCIVALPRTFQIKG--- 225 (424)
T ss_dssp C-CCC-----------------------HHHH-HHHH--HHHHHHHHHTTCCSCHHHHHHCCSSEEESSCTTTSTTG---
T ss_pred c-cccccccccc-cccccccchhhh-ccchhH-HHHH--HHHHHHHHHcCCCCCHHHhccCCCcEEEEcchhhCCCc---
Confidence 0 0000000000 00 000000000 000000 0000 0011111110 0011145678889988887531
Q ss_pred HHHhhCCcEEEeCccccCCcCchhhhhcCCCCCcChhHHhHhhhcCCCCcEEEEecCCcccCCHHHHHHHHHHHHhCCCc
Q 010093 266 YRKALGRRAWHIGPVSLCNRNFEDKALRGKQASIDELECLKWLNSKQPYSVVYVCFGSLANFTSAQLMEIATGLEASGRN 345 (518)
Q Consensus 266 ~~~~~~~~v~~vGpl~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~vIyvslGS~~~~~~~~~~~l~~al~~~~~~ 345 (518)
..+++++++|||+.... .+..+|++..+++++|||++||......+.+..++++++..+++
T Consensus 226 --~~~~~~~~~vGp~~~~~-----------------~~~~~~~~~~~~~~~v~v~~Gs~~~~~~~~~~~~~~al~~~~~~ 286 (424)
T 2iya_A 226 --DTVGDNYTFVGPTYGDR-----------------SHQGTWEGPGDGRPVLLIALGSAFTDHLDFYRTCLSAVDGLDWH 286 (424)
T ss_dssp --GGCCTTEEECCCCCCCC-----------------GGGCCCCCCCSSCCEEEEECCSSSCCCHHHHHHHHHHHTTCSSE
T ss_pred --cCCCCCEEEeCCCCCCc-----------------ccCCCCCccCCCCCEEEEEcCCCCcchHHHHHHHHHHHhcCCcE
Confidence 45778999999975321 12335766555678999999999866678889999999998999
Q ss_pred EEEEEcCCCCCCCCCCCCCCChhHHHHHhcCCCcEeecCccHHHhhccCCCcccccccCchhHHHHHHhCCceecCCccc
Q 010093 346 FIWVVSKNKNDGGEGGNEDWLPEGFEKRMEGKGLIIRGWAPQVLILDHEAVGGFVTHCGWNSTLEAVAAGVPLVTWPVAA 425 (518)
Q Consensus 346 ~i~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~nv~~~~~~pq~~lL~~~~~~~~ItHgG~~s~~eal~~GvP~l~~P~~~ 425 (518)
++|.++.+. +.+.+.. + ++|+.+.+|+||.++|++++ +||||||+||+.||+++|||+|++|...
T Consensus 287 ~~~~~g~~~---~~~~~~~-~---------~~~v~~~~~~~~~~~l~~~d--~~v~~~G~~t~~Ea~~~G~P~i~~p~~~ 351 (424)
T 2iya_A 287 VVLSVGRFV---DPADLGE-V---------PPNVEVHQWVPQLDILTKAS--AFITHAGMGSTMEALSNAVPMVAVPQIA 351 (424)
T ss_dssp EEEECCTTS---CGGGGCS-C---------CTTEEEESSCCHHHHHTTCS--EEEECCCHHHHHHHHHTTCCEEECCCSH
T ss_pred EEEEECCcC---ChHHhcc-C---------CCCeEEecCCCHHHHHhhCC--EEEECCchhHHHHHHHcCCCEEEecCcc
Confidence 999987644 1111111 2 46999999999999998855 5999999999999999999999999999
Q ss_pred ccchhHHHHHHhhhcceeeccccccccccCccChHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHH
Q 010093 426 EQFYNEKMVNEILKIGVGVGIQKWCRIVGDFVKRETIEKAVNEIMVGDRAEEMRSRAKALGKMAKRAVENGGSSYSDLSA 505 (518)
Q Consensus 426 DQ~~na~~v~e~~G~G~~l~~~~~~~~~~~~~~~~~l~~av~~ll~~~~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~ 505 (518)
||+.||+++ ++.|+|+.+... .+++++|.++|+++|+ |++|+++++++++.++ ..+|. ..+.+
T Consensus 352 dQ~~na~~l-~~~g~g~~~~~~--------~~~~~~l~~~i~~ll~---~~~~~~~~~~~~~~~~---~~~~~--~~~~~ 414 (424)
T 2iya_A 352 EQTMNAERI-VELGLGRHIPRD--------QVTAEKLREAVLAVAS---DPGVAERLAAVRQEIR---EAGGA--RAAAD 414 (424)
T ss_dssp HHHHHHHHH-HHTTSEEECCGG--------GCCHHHHHHHHHHHHH---CHHHHHHHHHHHHHHH---TSCHH--HHHHH
T ss_pred chHHHHHHH-HHCCCEEEcCcC--------CCCHHHHHHHHHHHHc---CHHHHHHHHHHHHHHH---hcCcH--HHHHH
Confidence 999999999 599999999765 7899999999999998 7799999999999988 55444 33345
Q ss_pred HHHHH
Q 010093 506 LIEEL 510 (518)
Q Consensus 506 ~~~~~ 510 (518)
.|+.+
T Consensus 415 ~i~~~ 419 (424)
T 2iya_A 415 ILEGI 419 (424)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 55444
No 7
>4amg_A Snogd; transferase, polyketide biosynthesis, GT1 family, nogalamyci; HET: MLY; 2.59A {Streptomyces nogalater} PDB: 4an4_A* 4amb_A*
Probab=100.00 E-value=7.8e-44 Score=362.48 Aligned_cols=371 Identities=16% Similarity=0.172 Sum_probs=231.6
Q ss_pred CCCcEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCCCCccchhhhhhhhhccCCCeEEEEeeCCCccC--CCCCCC
Q 010093 33 IPQLHVFFFPFMAHGHMIPIVDMAKLFATRGVKASVITTPANAPYVSKSVERANELGIEMDVKTIKFPSVEA--GLPEGC 110 (518)
Q Consensus 33 ~~~~kIl~~~~~~~GH~~p~l~LA~~L~~rGH~Vt~~~~~~~~~~~~~~~~~~~~~g~~i~~~~ip~~~~~~--~l~~~~ 110 (518)
.+.|||||+++|+.||++|+++||++|++|||+|||++++.+...... ++.+..+....... ..+...
T Consensus 20 ~~~MRIL~~~~p~~GHv~P~l~LA~~L~~rGh~Vt~~t~~~~~~~~~~----------g~~~~~~~~~~~~~~~~~~~~~ 89 (400)
T 4amg_A 20 FQSMRALFITSPGLSHILPTVPLAQALRALGHEVRYATGGDIRAVAEA----------GLCAVDVSPGVNYAKLFVPDDT 89 (400)
T ss_dssp -CCCEEEEECCSSHHHHGGGHHHHHHHHHTTCEEEEEECSSTHHHHTT----------TCEEEESSTTCCSHHHHSCCC-
T ss_pred CCCCeEEEECCCchhHHHHHHHHHHHHHHCCCEEEEEeCcchhhHHhc----------CCeeEecCCchhHhhhcccccc
Confidence 356899999999999999999999999999999999999876553321 34444442110000 000000
Q ss_pred Cccccccch--hhhhhHHHHHHHHHhhHHHHHHHHhhCCCCEEEecCCCccHHHHHHHcCCCeEEEecchHHHHHHHhhh
Q 010093 111 ENLDAITNE--VNKGLIVKFFGATMKLQEPLEQLLQEHKPDCLVADTFFPWATDAAAKFGIPRLVFHGTSFFSLCASNCL 188 (518)
Q Consensus 111 ~~~~~~~~~--~~~~~~~~~~~~~~~~~~~l~~ll~~~~pDlVI~D~~~~~~~~iA~~lgiP~v~~~~~~~~~~~~~~~~ 188 (518)
......... ........+..........+.+++++++||+||+|.+.+++..+|+.+|||++.+...+......
T Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~pD~Vv~d~~~~~~~~~A~~~gip~~~~~~~~~~~~~~---- 165 (400)
T 4amg_A 90 DVTDPMHSEGLGEGFFAEMFARVSAVAVDGALRTARSWRPDLVVHTPTQGAGPLTAAALQLPCVELPLGPADSEPG---- 165 (400)
T ss_dssp -----------CHHHHHHHHHHHHHHHHHHHHHHHHHHCCSEEEECTTCTHHHHHHHHTTCCEEECCSSTTTCCHH----
T ss_pred ccccccchhhhhHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEECcchHHHHHHHHHcCCCceeecccccccccc----
Confidence 000000000 00011222223334456677778888999999999999999999999999999865442111000
Q ss_pred hhcCCCCCCCCCCCccccCCCCCCccccCCCCCcccccCCCCchHHHHHHHhhhhcccccEEEEcCccccchHHHHHH-H
Q 010093 189 ALYEPHKKVSSDSEPFVMPHFPGEIKLTRNQLPDFVKQDMGDNDFSRLLKAIDDSDLRSYGVAVNSFYELEPAYADHY-R 267 (518)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ns~~~L~~~~~~~~-~ 267 (518)
+.. ... . .+.....+................ +...... +
T Consensus 166 --------------------~~~---~~~----~---------~l~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~ 205 (400)
T 4amg_A 166 --------------------LGA---LIR----R---------AMSKDYERHGVTGEPTGSVRLTTT----PPSVEALLP 205 (400)
T ss_dssp --------------------HHH---HHH----H---------HTHHHHHHTTCCCCCSCEEEEECC----CHHHHHTSC
T ss_pred --------------------hhh---HHH----H---------HHHHHHHHhCCCcccccchhhccc----CchhhccCc
Confidence 000 000 0 011111111111111111111111 1111000 0
Q ss_pred H-hhCCcEEEeCccccCCcCchhhhhcCCCCCcChhHHhHhhhcCCCCcEEEEecCCcccCC--HHHHHHHHHHHHhCCC
Q 010093 268 K-ALGRRAWHIGPVSLCNRNFEDKALRGKQASIDELECLKWLNSKQPYSVVYVCFGSLANFT--SAQLMEIATGLEASGR 344 (518)
Q Consensus 268 ~-~~~~~v~~vGpl~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~vIyvslGS~~~~~--~~~~~~l~~al~~~~~ 344 (518)
. ...+....+.+.... ....+.+|++..+++++|||||||+.... .+.+..+++++++.+.
T Consensus 206 ~~~~~~~~~~~~~~~~~----------------~~~~~~~~l~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~~~~l~~~~~ 269 (400)
T 4amg_A 206 EDRRSPGAWPMRYVPYN----------------GGAVLPDWLPPAAGRRRIAVTLGSIDALSGGIAKLAPLFSEVADVDA 269 (400)
T ss_dssp GGGCCTTCEECCCCCCC----------------CCEECCTTCSCCTTCCEEEECCCSCC--CCSSSTTHHHHHHGGGSSS
T ss_pred ccccCCcccCccccccc----------------ccccCcccccccCCCcEEEEeCCcccccCccHHHHHHHHHHhhccCc
Confidence 0 001222222221111 12345568888888999999999987643 4678889999999999
Q ss_pred cEEEEEcCCCCCCCCCCCCCCChhHHHHHhcCCCcEeecCccHHHhhccCCCcccccccCchhHHHHHHhCCceecCCcc
Q 010093 345 NFIWVVSKNKNDGGEGGNEDWLPEGFEKRMEGKGLIIRGWAPQVLILDHEAVGGFVTHCGWNSTLEAVAAGVPLVTWPVA 424 (518)
Q Consensus 345 ~~i~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~nv~~~~~~pq~~lL~~~~~~~~ItHgG~~s~~eal~~GvP~l~~P~~ 424 (518)
+++|.+++.. .+.... + ++|+++.+|+||.++|+|+ ++||||||+||+.||+++|||+|++|++
T Consensus 270 ~~v~~~~~~~----~~~~~~-~---------~~~v~~~~~~p~~~lL~~~--~~~v~h~G~~s~~Eal~~GvP~v~~P~~ 333 (400)
T 4amg_A 270 EFVLTLGGGD----LALLGE-L---------PANVRVVEWIPLGALLETC--DAIIHHGGSGTLLTALAAGVPQCVIPHG 333 (400)
T ss_dssp EEEEECCTTC----CCCCCC-C---------CTTEEEECCCCHHHHHTTC--SEEEECCCHHHHHHHHHHTCCEEECCC-
T ss_pred eEEEEecCcc----cccccc-C---------CCCEEEEeecCHHHHhhhh--hheeccCCccHHHHHHHhCCCEEEecCc
Confidence 9999987654 112222 3 4599999999999999885 4599999999999999999999999999
Q ss_pred cccchhHHHHHHhhhcceeeccccccccccCccChHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHhcCCCcHHHHH
Q 010093 425 AEQFYNEKMVNEILKIGVGVGIQKWCRIVGDFVKRETIEKAVNEIMVGDRAEEMRSRAKALGKMAKRAVENGGSSYSDLS 504 (518)
Q Consensus 425 ~DQ~~na~~v~e~~G~G~~l~~~~~~~~~~~~~~~~~l~~av~~ll~~~~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~ 504 (518)
.||+.||+++ ++.|+|+.++.. +.++ ++|+++|+ |++||++|++++++++ ...|. +.+.
T Consensus 334 ~dQ~~na~~v-~~~G~g~~l~~~--------~~~~----~al~~lL~---d~~~r~~a~~l~~~~~---~~~~~--~~~a 392 (400)
T 4amg_A 334 SYQDTNRDVL-TGLGIGFDAEAG--------SLGA----EQCRRLLD---DAGLREAALRVRQEMS---EMPPP--AETA 392 (400)
T ss_dssp --CHHHHHHH-HHHTSEEECCTT--------TCSH----HHHHHHHH---CHHHHHHHHHHHHHHH---TSCCH--HHHH
T ss_pred ccHHHHHHHH-HHCCCEEEcCCC--------CchH----HHHHHHHc---CHHHHHHHHHHHHHHH---cCCCH--HHHH
Confidence 9999999999 599999999765 5655 46788998 7899999999999999 66654 3334
Q ss_pred HHHHHH
Q 010093 505 ALIEEL 510 (518)
Q Consensus 505 ~~~~~~ 510 (518)
+.++.|
T Consensus 393 ~~le~l 398 (400)
T 4amg_A 393 AXLVAL 398 (400)
T ss_dssp HHHHHH
T ss_pred HHHHHh
Confidence 555543
No 8
>1iir_A Glycosyltransferase GTFB; rossmann fold; 1.80A {Amycolatopsis orientalis} SCOP: c.87.1.5
Probab=100.00 E-value=2.5e-40 Score=338.26 Aligned_cols=380 Identities=17% Similarity=0.180 Sum_probs=247.0
Q ss_pred cEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCCCCccchhhhhhhhhccCCCeEEEEeeCCCccCCCCCCCCcccc
Q 010093 36 LHVFFFPFMAHGHMIPIVDMAKLFATRGVKASVITTPANAPYVSKSVERANELGIEMDVKTIKFPSVEAGLPEGCENLDA 115 (518)
Q Consensus 36 ~kIl~~~~~~~GH~~p~l~LA~~L~~rGH~Vt~~~~~~~~~~~~~~~~~~~~~g~~i~~~~ip~~~~~~~l~~~~~~~~~ 115 (518)
|||+|++.++.||++|+++||++|++|||+|||++++.+.+.+... +++|+.++.... +.+ .....
T Consensus 1 M~Il~~~~~~~GHv~P~l~la~~L~~~Gh~V~~~~~~~~~~~v~~~---------g~~~~~i~~~~~-~~~----~~~~~ 66 (415)
T 1iir_A 1 MRVLLATCGSRGDTEPLVALAVRVRDLGADVRMCAPPDCAERLAEV---------GVPHVPVGPSAR-API----QRAKP 66 (415)
T ss_dssp CEEEEECCSCHHHHHHHHHHHHHHHHTTCEEEEEECGGGHHHHHHT---------TCCEEECCC------------CCSC
T ss_pred CeEEEEcCCCchhHHHHHHHHHHHHHCCCeEEEEcCHHHHHHHHHc---------CCeeeeCCCCHH-HHh----hcccc
Confidence 6999999999999999999999999999999999998765544433 567777763210 011 01010
Q ss_pred ccchhhhhhHHHHHHHHHhhHHHHHHHHh-hCCCCEEEecC-CCcc--HHHHHHHcCCCeEEEecchHHHHHHHhhhhhc
Q 010093 116 ITNEVNKGLIVKFFGATMKLQEPLEQLLQ-EHKPDCLVADT-FFPW--ATDAAAKFGIPRLVFHGTSFFSLCASNCLALY 191 (518)
Q Consensus 116 ~~~~~~~~~~~~~~~~~~~~~~~l~~ll~-~~~pDlVI~D~-~~~~--~~~iA~~lgiP~v~~~~~~~~~~~~~~~~~~~ 191 (518)
. .. ..+..+.. ......++++.+ ..+||+||+|. +..+ +..+|+++|||++.+++.+.....
T Consensus 67 ~-~~---~~~~~~~~--~~~~~~~~~l~~~~~~pD~vi~d~~~~~~~~~~~~A~~lgiP~v~~~~~~~~~~~-------- 132 (415)
T 1iir_A 67 L-TA---EDVRRFTT--EAIATQFDEIPAAAEGCAAVVTTGLLAAAIGVRSVAEKLGIPYFYAFHCPSYVPS-------- 132 (415)
T ss_dssp C-CH---HHHHHHHH--HHHHHHHHHHHHHTTTCSEEEEESCHHHHHHHHHHHHHHTCCEEEEESSGGGSCC--------
T ss_pred c-ch---HHHHHHHH--HHHHHHHHHHHHHhcCCCEEEECChhHhHhhHHHHHHHhCCCEEEEecCCCcCCC--------
Confidence 0 00 11111111 112233444443 57999999997 5568 899999999999998876532210
Q ss_pred CCCCCCCCCCCccccCCCCCCccccCCCCCcccccCCCC--chHHHHHHHhhhhc------------ccccEEEEcCccc
Q 010093 192 EPHKKVSSDSEPFVMPHFPGEIKLTRNQLPDFVKQDMGD--NDFSRLLKAIDDSD------------LRSYGVAVNSFYE 257 (518)
Q Consensus 192 ~~~~~~~~~~~~~~~p~l~~~~~~~~~~l~~~~~~~~~~--~~~~~~~~~~~~~~------------~~~~~~l~ns~~~ 257 (518)
...+....+. .++.+. ....+... +.... ..+....+...... ... .+++++++.
T Consensus 133 ---~~~p~~~~~~---~~~~~~--~~n~~~~~--~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~-~~l~~~~~~ 201 (415)
T 1iir_A 133 ---PYYPPPPLGE---PSTQDT--IDIPAQWE--RNNQSAYQRYGGLLNSHRDAIGLPPVEDIFTFGYTD-HPWVAADPV 201 (415)
T ss_dssp ---SSSCCCC--------------CHHHHHHH--HHHHHHHHHHHHHHHHHHHHTTCCCCCCHHHHHHCS-SCEECSCTT
T ss_pred ---cccCCccCCc---cccchH--HHHHHHHH--HHHHHHHHHhHHHHHHHHHHcCCCCCCccccccCCC-CEEEeeChh
Confidence 0000000000 010000 00000000 00000 00000111111110 112 467888887
Q ss_pred cch-HHHHHHHHhhCCcEEEeCccccCCcCchhhhhcCCCCCcChhHHhHhhhcCCCCcEEEEecCCcccCCHHHHHHHH
Q 010093 258 LEP-AYADHYRKALGRRAWHIGPVSLCNRNFEDKALRGKQASIDELECLKWLNSKQPYSVVYVCFGSLANFTSAQLMEIA 336 (518)
Q Consensus 258 L~~-~~~~~~~~~~~~~v~~vGpl~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~vIyvslGS~~~~~~~~~~~l~ 336 (518)
+++ + +..+ ++++|||+...+. +..+.++.+|++.. +++|||++||.. ...+.+..++
T Consensus 202 l~~~~-----~~~~--~~~~vG~~~~~~~------------~~~~~~~~~~l~~~--~~~v~v~~Gs~~-~~~~~~~~~~ 259 (415)
T 1iir_A 202 LAPLQ-----PTDL--DAVQTGAWILPDE------------RPLSPELAAFLDAG--PPPVYLGFGSLG-APADAVRVAI 259 (415)
T ss_dssp TSCCC-----CCSS--CCEECCCCCCCCC------------CCCCHHHHHHHHTS--SCCEEEECC----CCHHHHHHHH
T ss_pred hcCCC-----cccC--CeEeeCCCccCcc------------cCCCHHHHHHHhhC--CCeEEEeCCCCC-CcHHHHHHHH
Confidence 774 2 1112 7899999876421 11357899999765 369999999987 5678888899
Q ss_pred HHHHhCCCcEEEEEcCCCCCCCCCCCCCCChhHHHHHhcCCCcEeecCccHHHhhccCCCcccccccCchhHHHHHHhCC
Q 010093 337 TGLEASGRNFIWVVSKNKNDGGEGGNEDWLPEGFEKRMEGKGLIIRGWAPQVLILDHEAVGGFVTHCGWNSTLEAVAAGV 416 (518)
Q Consensus 337 ~al~~~~~~~i~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~nv~~~~~~pq~~lL~~~~~~~~ItHgG~~s~~eal~~Gv 416 (518)
++++.++++++|+++... . +... + ++|+++.+|+||.++|+. +++||||||+||+.||+++||
T Consensus 260 ~al~~~~~~~v~~~g~~~----~-~~~~-~---------~~~v~~~~~~~~~~~l~~--~d~~v~~~G~~t~~Ea~~~G~ 322 (415)
T 1iir_A 260 DAIRAHGRRVILSRGWAD----L-VLPD-D---------GADCFAIGEVNHQVLFGR--VAAVIHHGGAGTTHVAARAGA 322 (415)
T ss_dssp HHHHHTTCCEEECTTCTT----C-CCSS-C---------GGGEEECSSCCHHHHGGG--SSEEEECCCHHHHHHHHHHTC
T ss_pred HHHHHCCCeEEEEeCCCc----c-cccC-C---------CCCEEEeCcCChHHHHhh--CCEEEeCCChhHHHHHHHcCC
Confidence 999999999999987644 1 1111 3 348999999999999955 777999999999999999999
Q ss_pred ceecCCcccccchhHHHHHHhhhcceeeccccccccccCccChHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHhcC
Q 010093 417 PLVTWPVAAEQFYNEKMVNEILKIGVGVGIQKWCRIVGDFVKRETIEKAVNEIMVGDRAEEMRSRAKALGKMAKRAVENG 496 (518)
Q Consensus 417 P~l~~P~~~DQ~~na~~v~e~~G~G~~l~~~~~~~~~~~~~~~~~l~~av~~ll~~~~~~~~~~~a~~l~~~~~~~~~~~ 496 (518)
|+|++|.+.||+.||+++ ++.|+|+.+... ++++++|.++|+++ + |++|+++++++++.++ ..+
T Consensus 323 P~i~~p~~~dQ~~na~~l-~~~g~g~~~~~~--------~~~~~~l~~~i~~l-~---~~~~~~~~~~~~~~~~---~~~ 386 (415)
T 1iir_A 323 PQILLPQMADQPYYAGRV-AELGVGVAHDGP--------IPTFDSLSAALATA-L---TPETHARATAVAGTIR---TDG 386 (415)
T ss_dssp CEEECCCSTTHHHHHHHH-HHHTSEEECSSS--------SCCHHHHHHHHHHH-T---SHHHHHHHHHHHHHSC---SCH
T ss_pred CEEECCCCCccHHHHHHH-HHCCCcccCCcC--------CCCHHHHHHHHHHH-c---CHHHHHHHHHHHHHHh---hcC
Confidence 999999999999999999 699999998765 78999999999999 8 7899999999999887 333
Q ss_pred CCcHHHHHHHHHHHH
Q 010093 497 GSSYSDLSALIEELR 511 (518)
Q Consensus 497 g~~~~~~~~~~~~~~ 511 (518)
|. ..+.+.|+.+.
T Consensus 387 ~~--~~~~~~i~~~~ 399 (415)
T 1iir_A 387 AA--VAARLLLDAVS 399 (415)
T ss_dssp HH--HHHHHHHHHHH
T ss_pred hH--HHHHHHHHHHH
Confidence 33 33455555543
No 9
>3rsc_A CALG2; TDP, enediyne, structural genomics, PSI-2, protein structure initiative, center for eukaryotic structural genomics; HET: TYD C0T; 2.19A {Micromonospora echinospora} PDB: 3iaa_A*
Probab=100.00 E-value=1.1e-39 Score=333.59 Aligned_cols=368 Identities=16% Similarity=0.151 Sum_probs=251.3
Q ss_pred CCCcEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCCCCccchhhhhhhhhccCCCeEEEEeeCCCccCCCCCCCCc
Q 010093 33 IPQLHVFFFPFMAHGHMIPIVDMAKLFATRGVKASVITTPANAPYVSKSVERANELGIEMDVKTIKFPSVEAGLPEGCEN 112 (518)
Q Consensus 33 ~~~~kIl~~~~~~~GH~~p~l~LA~~L~~rGH~Vt~~~~~~~~~~~~~~~~~~~~~g~~i~~~~ip~~~~~~~l~~~~~~ 112 (518)
.+||||+|++.++.||++|+++||++|+++||+|++++++.+.+.+... ++.+..++.. ++.....
T Consensus 18 ~~m~rIl~~~~~~~GHv~p~l~La~~L~~~Gh~V~v~~~~~~~~~~~~~---------G~~~~~~~~~-----~~~~~~~ 83 (415)
T 3rsc_A 18 RHMAHLLIVNVASHGLILPTLTVVTELVRRGHRVSYVTAGGFAEPVRAA---------GATVVPYQSE-----IIDADAA 83 (415)
T ss_dssp -CCCEEEEECCSCHHHHGGGHHHHHHHHHTTCEEEEEECGGGHHHHHHT---------TCEEEECCCS-----TTTCCHH
T ss_pred ccCCEEEEEeCCCccccccHHHHHHHHHHCCCEEEEEeCHHHHHHHHhc---------CCEEEecccc-----ccccccc
Confidence 4688999999999999999999999999999999999998776666543 5667776532 1111000
Q ss_pred --cccccchhhhhhHHH-HHHHHHhhHHHHHHHHhhCCCCEEEec-CCCccHHHHHHHcCCCeEEEecchHHHHHHHhhh
Q 010093 113 --LDAITNEVNKGLIVK-FFGATMKLQEPLEQLLQEHKPDCLVAD-TFFPWATDAAAKFGIPRLVFHGTSFFSLCASNCL 188 (518)
Q Consensus 113 --~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~ll~~~~pDlVI~D-~~~~~~~~iA~~lgiP~v~~~~~~~~~~~~~~~~ 188 (518)
....... ..+.. +..........+.+++++++||+||+| ...+++..+|+.+|||++.+.+......
T Consensus 84 ~~~~~~~~~---~~~~~~~~~~~~~~~~~l~~~l~~~~PDlVi~d~~~~~~~~~aA~~~giP~v~~~~~~~~~~------ 154 (415)
T 3rsc_A 84 EVFGSDDLG---VRPHLMYLRENVSVLRATAEALDGDVPDLVLYDDFPFIAGQLLAARWRRPAVRLSAAFASNE------ 154 (415)
T ss_dssp HHHHSSSSC---HHHHHHHHHHHHHHHHHHHHHHSSSCCSEEEEESTTHHHHHHHHHHTTCCEEEEESSCCCCS------
T ss_pred hhhccccHH---HHHHHHHHHHHHHHHHHHHHHHhccCCCEEEECchhhhHHHHHHHHhCCCEEEEEecccccC------
Confidence 0000000 22222 333444556778888889999999999 7777899999999999999765421000
Q ss_pred hhcCCCCCCCCCCCccccCCCCCCccccCCCCCcccccCCCCchHHHHHHHhh------hhccc-ccEEEEcCccccchH
Q 010093 189 ALYEPHKKVSSDSEPFVMPHFPGEIKLTRNQLPDFVKQDMGDNDFSRLLKAID------DSDLR-SYGVAVNSFYELEPA 261 (518)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~------~~~~~-~~~~l~ns~~~L~~~ 261 (518)
... ..+...+..+ ...+....++ ...+..+..... ..... .+..+......++
T Consensus 155 -------~~~--~~~~~~~~~~-------~~~p~~~~~~--~~~~~~~~~~~g~~~~~~~~~~~~~~~~l~~~~~~~~-- 214 (415)
T 3rsc_A 155 -------HYS--FSQDMVTLAG-------TIDPLDLPVF--RDTLRDLLAEHGLSRSVVDCWNHVEQLNLVFVPKAFQ-- 214 (415)
T ss_dssp -------SCC--HHHHHHHHHT-------CCCGGGCHHH--HHHHHHHHHHTTCCCCHHHHHTCCCSEEEESSCTTTS--
T ss_pred -------ccc--cccccccccc-------cCChhhHHHH--HHHHHHHHHHcCCCCChhhhhcCCCCeEEEEcCcccC--
Confidence 000 0000000000 0000000000 000111111110 00111 1444544433333
Q ss_pred HHHHHHHhhCCcEEEeCccccCCcCchhhhhcCCCCCcChhHHhHhhhcCCCCcEEEEecCCcccCCHHHHHHHHHHHHh
Q 010093 262 YADHYRKALGRRAWHIGPVSLCNRNFEDKALRGKQASIDELECLKWLNSKQPYSVVYVCFGSLANFTSAQLMEIATGLEA 341 (518)
Q Consensus 262 ~~~~~~~~~~~~v~~vGpl~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~vIyvslGS~~~~~~~~~~~l~~al~~ 341 (518)
.....++.++.++||+.... .+..+|....+++++||+++||......+.+..++++++.
T Consensus 215 ---~~~~~~~~~~~~vGp~~~~~-----------------~~~~~~~~~~~~~~~v~v~~Gs~~~~~~~~~~~~~~al~~ 274 (415)
T 3rsc_A 215 ---IAGDTFDDRFVFVGPCFDDR-----------------RFLGEWTRPADDLPVVLVSLGTTFNDRPGFFRDCARAFDG 274 (415)
T ss_dssp ---TTGGGCCTTEEECCCCCCCC-----------------GGGCCCCCCSSCCCEEEEECTTTSCCCHHHHHHHHHHHTT
T ss_pred ---CCcccCCCceEEeCCCCCCc-----------------ccCcCccccCCCCCEEEEECCCCCCChHHHHHHHHHHHhc
Confidence 23355678899999875431 2233455445567899999999987677888999999999
Q ss_pred CCCcEEEEEcCCCCCCCCCCCCCCChhHHHHHhcCCCcEeecCccHHHhhccCCCcccccccCchhHHHHHHhCCceecC
Q 010093 342 SGRNFIWVVSKNKNDGGEGGNEDWLPEGFEKRMEGKGLIIRGWAPQVLILDHEAVGGFVTHCGWNSTLEAVAAGVPLVTW 421 (518)
Q Consensus 342 ~~~~~i~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~nv~~~~~~pq~~lL~~~~~~~~ItHgG~~s~~eal~~GvP~l~~ 421 (518)
.+.+++|.++.+. +.+.+.. + ++|+++.+|+|+.++|++++ +||||||.||+.||+++|+|+|++
T Consensus 275 ~~~~~v~~~g~~~---~~~~l~~-~---------~~~v~~~~~~~~~~ll~~ad--~~v~~~G~~t~~Ea~~~G~P~v~~ 339 (415)
T 3rsc_A 275 QPWHVVMTLGGQV---DPAALGD-L---------PPNVEAHRWVPHVKVLEQAT--VCVTHGGMGTLMEALYWGRPLVVV 339 (415)
T ss_dssp SSCEEEEECTTTS---CGGGGCC-C---------CTTEEEESCCCHHHHHHHEE--EEEESCCHHHHHHHHHTTCCEEEC
T ss_pred CCcEEEEEeCCCC---ChHHhcC-C---------CCcEEEEecCCHHHHHhhCC--EEEECCcHHHHHHHHHhCCCEEEe
Confidence 9999999988653 1112211 2 56999999999999998855 599999999999999999999999
Q ss_pred CcccccchhHHHHHHhhhcceeeccccccccccCccChHHHHHHHHHHhcCChHHHHHHHHHHHHHHHH
Q 010093 422 PVAAEQFYNEKMVNEILKIGVGVGIQKWCRIVGDFVKRETIEKAVNEIMVGDRAEEMRSRAKALGKMAK 490 (518)
Q Consensus 422 P~~~DQ~~na~~v~e~~G~G~~l~~~~~~~~~~~~~~~~~l~~av~~ll~~~~~~~~~~~a~~l~~~~~ 490 (518)
|...||+.||.++ ++.|+|+.+... ++++++|.++|.++|+ |++++++++++++.+.
T Consensus 340 p~~~~q~~~a~~l-~~~g~g~~~~~~--------~~~~~~l~~~i~~ll~---~~~~~~~~~~~~~~~~ 396 (415)
T 3rsc_A 340 PQSFDVQPMARRV-DQLGLGAVLPGE--------KADGDTLLAAVGAVAA---DPALLARVEAMRGHVR 396 (415)
T ss_dssp CCSGGGHHHHHHH-HHHTCEEECCGG--------GCCHHHHHHHHHHHHT---CHHHHHHHHHHHHHHH
T ss_pred CCcchHHHHHHHH-HHcCCEEEcccC--------CCCHHHHHHHHHHHHc---CHHHHHHHHHHHHHHH
Confidence 9999999999999 599999999776 7899999999999998 7899999999999988
No 10
>1rrv_A Glycosyltransferase GTFD; GT-B, glycosyltransferase, rossmann fold, glycopeptide, VACO antibiotic, transferase-antibiotic complex; HET: OMZ GHP OMY 3FG TYD BGC; 2.00A {Amycolatopsis orientalis} SCOP: c.87.1.5
Probab=100.00 E-value=2.4e-39 Score=331.12 Aligned_cols=378 Identities=17% Similarity=0.133 Sum_probs=249.6
Q ss_pred cEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCCCCccchhhhhhhhhccCCCeEEEEeeCCCccCCCCCCCCcccc
Q 010093 36 LHVFFFPFMAHGHMIPIVDMAKLFATRGVKASVITTPANAPYVSKSVERANELGIEMDVKTIKFPSVEAGLPEGCENLDA 115 (518)
Q Consensus 36 ~kIl~~~~~~~GH~~p~l~LA~~L~~rGH~Vt~~~~~~~~~~~~~~~~~~~~~g~~i~~~~ip~~~~~~~l~~~~~~~~~ 115 (518)
|||+|++.++.||++|+++||++|+++||+|+|++++.+.+.+... +++++.++... ...+.. . ...
T Consensus 1 MrIl~~~~~~~GH~~p~l~la~~L~~~Gh~V~~~~~~~~~~~v~~~---------g~~~~~~~~~~-~~~~~~-~--~~~ 67 (416)
T 1rrv_A 1 MRVLLSVCGTRGDVEIGVALADRLKALGVQTRMCAPPAAEERLAEV---------GVPHVPVGLPQ-HMMLQE-G--MPP 67 (416)
T ss_dssp CEEEEEEESCHHHHHHHHHHHHHHHHTTCEEEEEECGGGHHHHHHH---------TCCEEECSCCG-GGCCCT-T--SCC
T ss_pred CeEEEEecCCCccHHHHHHHHHHHHHCCCeEEEEeCHHHHHHHHHc---------CCeeeecCCCH-HHHHhh-c--ccc
Confidence 6999999999999999999999999999999999998766555544 56677775321 111111 0 000
Q ss_pred ccchhhhhhHHHHH-HHHHhhHHHHHHHHhhCCCCEEEecCC-Ccc--HHHHHHHcCCCeEEEecchHHHHHHHhhhhhc
Q 010093 116 ITNEVNKGLIVKFF-GATMKLQEPLEQLLQEHKPDCLVADTF-FPW--ATDAAAKFGIPRLVFHGTSFFSLCASNCLALY 191 (518)
Q Consensus 116 ~~~~~~~~~~~~~~-~~~~~~~~~l~~ll~~~~pDlVI~D~~-~~~--~~~iA~~lgiP~v~~~~~~~~~~~~~~~~~~~ 191 (518)
... ..+..+. .......+.+.+. ..+||+||+|.+ .++ +..+|+.+|||++.+.+.+....
T Consensus 68 -~~~---~~~~~~~~~~~~~~~~~l~~~--~~~pD~vi~d~~~~~~~~~~~~A~~~giP~v~~~~~~~~~~--------- 132 (416)
T 1rrv_A 68 -PPP---EEEQRLAAMTVEMQFDAVPGA--AEGCAAVVAVGDLAAATGVRSVAEKLGLPFFYSVPSPVYLA--------- 132 (416)
T ss_dssp -CCH---HHHHHHHHHHHHHHHHHHHHH--TTTCSEEEEEECHHHHHHHHHHHHHHTCCEEEEESSGGGSC---------
T ss_pred -chh---HHHHHHHHHHHHHHHHHHHHH--hcCCCEEEEcCchHHHHHHHHHHHHcCCCEEEEeCCCCCCC---------
Confidence 000 1111111 1112222222221 578999999973 457 88999999999998877642210
Q ss_pred CCCCCCCCCCCccccCCCCCCccccCCCCCccc--ccCC----C--CchHHHHHHHh--------hhhcccccEEEEcCc
Q 010093 192 EPHKKVSSDSEPFVMPHFPGEIKLTRNQLPDFV--KQDM----G--DNDFSRLLKAI--------DDSDLRSYGVAVNSF 255 (518)
Q Consensus 192 ~~~~~~~~~~~~~~~p~l~~~~~~~~~~l~~~~--~~~~----~--~~~~~~~~~~~--------~~~~~~~~~~l~ns~ 255 (518)
....+ |.+. +......+...+ .... . ......+.... ....... .+++++.
T Consensus 133 --~~~~p--------~~~~--~~~~~~r~~n~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~-~~l~~~~ 199 (416)
T 1rrv_A 133 --SPHLP--------PAYD--EPTTPGVTDIRVLWEERAARFADRYGPTLNRRRAEIGLPPVEDVFGYGHGE-RPLLAAD 199 (416)
T ss_dssp --CSSSC--------CCBC--SCCCTTCCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCSCHHHHTTCS-SCEECSC
T ss_pred --CcccC--------CCCC--CCCCchHHHHHHHHHHHHHHHHHHhHHHHHHHHHHcCCCCCCchhhhccCC-CeEEccC
Confidence 00000 1100 000000000000 0000 0 00001111111 0011122 5788888
Q ss_pred cccchHHHHHHHHhhCCcEEEeCccccCCcCchhhhhcCCCCCcChhHHhHhhhcCCCCcEEEEecCCccc-CCHHHHHH
Q 010093 256 YELEPAYADHYRKALGRRAWHIGPVSLCNRNFEDKALRGKQASIDELECLKWLNSKQPYSVVYVCFGSLAN-FTSAQLME 334 (518)
Q Consensus 256 ~~L~~~~~~~~~~~~~~~v~~vGpl~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~vIyvslGS~~~-~~~~~~~~ 334 (518)
++++++. .. .++++|||+..... +..+.++.+|++.. +++|||++||... ...+.+..
T Consensus 200 ~~l~~~~-----~~--~~~~~vG~~~~~~~------------~~~~~~~~~~l~~~--~~~v~v~~Gs~~~~~~~~~~~~ 258 (416)
T 1rrv_A 200 PVLAPLQ-----PD--VDAVQTGAWLLSDE------------RPLPPELEAFLAAG--SPPVHIGFGSSSGRGIADAAKV 258 (416)
T ss_dssp TTTSCCC-----SS--CCCEECCCCCCCCC------------CCCCHHHHHHHHSS--SCCEEECCTTCCSHHHHHHHHH
T ss_pred ccccCCC-----CC--CCeeeECCCccCcc------------CCCCHHHHHHHhcC--CCeEEEecCCCCccChHHHHHH
Confidence 8887431 11 27899999876421 11357889999765 3699999999864 45677888
Q ss_pred HHHHHHhCCCcEEEEEcCCCCCCCCCCCCCCChhHHHHHhcCCCcEeecCccHHHhhccCCCcccccccCchhHHHHHHh
Q 010093 335 IATGLEASGRNFIWVVSKNKNDGGEGGNEDWLPEGFEKRMEGKGLIIRGWAPQVLILDHEAVGGFVTHCGWNSTLEAVAA 414 (518)
Q Consensus 335 l~~al~~~~~~~i~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~nv~~~~~~pq~~lL~~~~~~~~ItHgG~~s~~eal~~ 414 (518)
++++++..+++++|+++... . +... + ++|+.+.+|+||.++|+. +++||||||+||++||+++
T Consensus 259 ~~~al~~~~~~~v~~~g~~~----~-~~~~-~---------~~~v~~~~~~~~~~ll~~--~d~~v~~~G~~t~~Ea~~~ 321 (416)
T 1rrv_A 259 AVEAIRAQGRRVILSRGWTE----L-VLPD-D---------RDDCFAIDEVNFQALFRR--VAAVIHHGSAGTEHVATRA 321 (416)
T ss_dssp HHHHHHHTTCCEEEECTTTT----C-CCSC-C---------CTTEEEESSCCHHHHGGG--SSEEEECCCHHHHHHHHHH
T ss_pred HHHHHHHCCCeEEEEeCCcc----c-cccC-C---------CCCEEEeccCChHHHhcc--CCEEEecCChhHHHHHHHc
Confidence 99999999999999988654 1 1111 2 459999999999999955 6679999999999999999
Q ss_pred CCceecCCcccccchhHHHHHHhhhcceeeccccccccccCccChHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHh
Q 010093 415 GVPLVTWPVAAEQFYNEKMVNEILKIGVGVGIQKWCRIVGDFVKRETIEKAVNEIMVGDRAEEMRSRAKALGKMAKRAVE 494 (518)
Q Consensus 415 GvP~l~~P~~~DQ~~na~~v~e~~G~G~~l~~~~~~~~~~~~~~~~~l~~av~~ll~~~~~~~~~~~a~~l~~~~~~~~~ 494 (518)
|||+|++|.+.||+.||+++ ++.|+|+.+... ..++++|.++|+++ . |++|++++++++++++ .
T Consensus 322 G~P~i~~p~~~dQ~~na~~l-~~~g~g~~~~~~--------~~~~~~l~~~i~~l-~---~~~~~~~~~~~~~~~~---~ 385 (416)
T 1rrv_A 322 GVPQLVIPRNTDQPYFAGRV-AALGIGVAHDGP--------TPTFESLSAALTTV-L---APETRARAEAVAGMVL---T 385 (416)
T ss_dssp TCCEEECCCSBTHHHHHHHH-HHHTSEEECSSS--------CCCHHHHHHHHHHH-T---SHHHHHHHHHHTTTCC---C
T ss_pred CCCEEEccCCCCcHHHHHHH-HHCCCccCCCCC--------CCCHHHHHHHHHHh-h---CHHHHHHHHHHHHHHh---h
Confidence 99999999999999999999 599999998765 68999999999999 8 7899999999999887 4
Q ss_pred cCCCcHHHHHHHH-HHHH
Q 010093 495 NGGSSYSDLSALI-EELR 511 (518)
Q Consensus 495 ~~g~~~~~~~~~~-~~~~ 511 (518)
.+|. . +.+.| +.+.
T Consensus 386 ~~~~--~-~~~~i~e~~~ 400 (416)
T 1rrv_A 386 DGAA--A-AADLVLAAVG 400 (416)
T ss_dssp CHHH--H-HHHHHHHHHH
T ss_pred cCcH--H-HHHHHHHHHh
Confidence 4443 3 34444 5554
No 11
>3ia7_A CALG4; glycosysltransferase, calicheamicin, enediyne, transf; 1.91A {Micromonospora echinospora}
Probab=100.00 E-value=1.7e-38 Score=323.11 Aligned_cols=366 Identities=19% Similarity=0.183 Sum_probs=248.3
Q ss_pred CCCcEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCCCCccchhhhhhhhhccCCCeEEEEeeCCCccCCCCCCCCc
Q 010093 33 IPQLHVFFFPFMAHGHMIPIVDMAKLFATRGVKASVITTPANAPYVSKSVERANELGIEMDVKTIKFPSVEAGLPEGCEN 112 (518)
Q Consensus 33 ~~~~kIl~~~~~~~GH~~p~l~LA~~L~~rGH~Vt~~~~~~~~~~~~~~~~~~~~~g~~i~~~~ip~~~~~~~l~~~~~~ 112 (518)
|.|+||+|++.++.||++|++.||++|+++||+|++++++.+.+.+... ++.+..++..... .. ....
T Consensus 2 m~M~~il~~~~~~~Ghv~~~~~La~~L~~~GheV~v~~~~~~~~~~~~~---------G~~~~~~~~~~~~--~~-~~~~ 69 (402)
T 3ia7_A 2 MRQRHILFANVQGHGHVYPSLGLVSELARRGHRITYVTTPLFADEVKAA---------GAEVVLYKSEFDT--FH-VPEV 69 (402)
T ss_dssp CCCCEEEEECCSSHHHHHHHHHHHHHHHHTTCEEEEEECHHHHHHHHHT---------TCEEEECCCGGGT--SS-SSSS
T ss_pred CCCCEEEEEeCCCCcccccHHHHHHHHHhCCCEEEEEcCHHHHHHHHHc---------CCEEEeccccccc--cc-cccc
Confidence 3567999999999999999999999999999999999997666555443 5667776532111 00 0000
Q ss_pred cccccchhhhhhHHH-HHHHHHhhHHHHHHHHhhCCCCEEEec-CCCccHHHHHHHcCCCeEEEecchHHHHHHHhhhhh
Q 010093 113 LDAITNEVNKGLIVK-FFGATMKLQEPLEQLLQEHKPDCLVAD-TFFPWATDAAAKFGIPRLVFHGTSFFSLCASNCLAL 190 (518)
Q Consensus 113 ~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~ll~~~~pDlVI~D-~~~~~~~~iA~~lgiP~v~~~~~~~~~~~~~~~~~~ 190 (518)
....... ..+.. +..........+.+++++++||+||+| .+.+++..+|+.+|||++.+.+....... +...
T Consensus 70 ~~~~~~~---~~~~~~~~~~~~~~~~~l~~~l~~~~pD~Vi~d~~~~~~~~~aA~~~giP~v~~~~~~~~~~~-~~~~-- 143 (402)
T 3ia7_A 70 VKQEDAE---TQLHLVYVRENVAILRAAEEALGDNPPDLVVYDVFPFIAGRLLAARWDRPAVRLTGGFAANEH-YSLF-- 143 (402)
T ss_dssp SCCTTHH---HHHHHHHHHHHHHHHHHHHHHHTTCCCSEEEEESTTHHHHHHHHHHHTCCEEEEESSCCCBTT-BCHH--
T ss_pred ccccchH---HHHHHHHHHHHHHHHHHHHHHHhccCCCEEEECchHHHHHHHHHHhhCCCEEEEecccccCcc-cccc--
Confidence 0000001 22222 333344456778888889999999999 67778999999999999988643211000 0000
Q ss_pred cCCCCCCCCCCCccccCCCCCCccccCCCCCcccccCCCCchHHHHHHHhhhh----------cccc-cEEEEcCccccc
Q 010093 191 YEPHKKVSSDSEPFVMPHFPGEIKLTRNQLPDFVKQDMGDNDFSRLLKAIDDS----------DLRS-YGVAVNSFYELE 259 (518)
Q Consensus 191 ~~~~~~~~~~~~~~~~p~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~----------~~~~-~~~l~ns~~~L~ 259 (518)
+...+... ...+.. . ..+.....+.... .... +..+.....+++
T Consensus 144 ------------~~~~~~~~-------~~~~~~---~---~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~l~~~~~~~~ 198 (402)
T 3ia7_A 144 ------------KELWKSNG-------QRHPAD---V---EAVHSVLVDLLGKYGVDTPVKEYWDEIEGLTIVFLPKSFQ 198 (402)
T ss_dssp ------------HHHHHHHT-------CCCGGG---S---HHHHHHHHHHHHTTTCCSCHHHHHTCCCSCEEESSCGGGS
T ss_pred ------------cccccccc-------ccChhh---H---HHHHHHHHHHHHHcCCCCChhhhhcCCCCeEEEEcChHhC
Confidence 00000000 000000 0 0001111111100 0111 334443333333
Q ss_pred hHHHHHHHHhhCCcEEEeCccccCCcCchhhhhcCCCCCcChhHHhHhhhcCCCCcEEEEecCCcccCCHHHHHHHHHHH
Q 010093 260 PAYADHYRKALGRRAWHIGPVSLCNRNFEDKALRGKQASIDELECLKWLNSKQPYSVVYVCFGSLANFTSAQLMEIATGL 339 (518)
Q Consensus 260 ~~~~~~~~~~~~~~v~~vGpl~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~vIyvslGS~~~~~~~~~~~l~~al 339 (518)
.....++.++.++||+.... .+..+|....+++++||+++||......+.+..+++++
T Consensus 199 -----~~~~~~~~~~~~vGp~~~~~-----------------~~~~~~~~~~~~~~~v~v~~G~~~~~~~~~~~~~~~~~ 256 (402)
T 3ia7_A 199 -----PFAETFDERFAFVGPTLTGR-----------------DGQPGWQPPRPDAPVLLVSLGNQFNEHPEFFRACAQAF 256 (402)
T ss_dssp -----TTGGGCCTTEEECCCCCCC---------------------CCCCCSSTTCCEEEEECCSCSSCCHHHHHHHHHHH
T ss_pred -----CccccCCCCeEEeCCCCCCc-----------------ccCCCCcccCCCCCEEEEECCCCCcchHHHHHHHHHHH
Confidence 22345678899999875431 22334554455678999999999877777899999999
Q ss_pred HhCCCcEEEEEcCCCCCCCCCCCCCCChhHHHHHhcCCCcEeecCccHHHhhccCCCcccccccCchhHHHHHHhCCcee
Q 010093 340 EASGRNFIWVVSKNKNDGGEGGNEDWLPEGFEKRMEGKGLIIRGWAPQVLILDHEAVGGFVTHCGWNSTLEAVAAGVPLV 419 (518)
Q Consensus 340 ~~~~~~~i~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~nv~~~~~~pq~~lL~~~~~~~~ItHgG~~s~~eal~~GvP~l 419 (518)
+..+.+++|.++.+. +.+.+.+ .++|+++.+|+|+.++|++++ +||||||.||+.||+++|+|+|
T Consensus 257 ~~~~~~~~~~~g~~~---~~~~~~~----------~~~~v~~~~~~~~~~ll~~ad--~~v~~~G~~t~~Ea~~~G~P~v 321 (402)
T 3ia7_A 257 ADTPWHVVMAIGGFL---DPAVLGP----------LPPNVEAHQWIPFHSVLAHAR--ACLTHGTTGAVLEAFAAGVPLV 321 (402)
T ss_dssp TTSSCEEEEECCTTS---CGGGGCS----------CCTTEEEESCCCHHHHHTTEE--EEEECCCHHHHHHHHHTTCCEE
T ss_pred hcCCcEEEEEeCCcC---ChhhhCC----------CCCcEEEecCCCHHHHHhhCC--EEEECCCHHHHHHHHHhCCCEE
Confidence 999999999988653 1111111 256999999999999998855 5999999999999999999999
Q ss_pred cCCc-ccccchhHHHHHHhhhcceeeccccccccccCccChHHHHHHHHHHhcCChHHHHHHHHHHHHHHHH
Q 010093 420 TWPV-AAEQFYNEKMVNEILKIGVGVGIQKWCRIVGDFVKRETIEKAVNEIMVGDRAEEMRSRAKALGKMAK 490 (518)
Q Consensus 420 ~~P~-~~DQ~~na~~v~e~~G~G~~l~~~~~~~~~~~~~~~~~l~~av~~ll~~~~~~~~~~~a~~l~~~~~ 490 (518)
++|. ..||+.||.++ ++.|+|+.+... +++++.|.++|.++|+ |++++++++++++.+.
T Consensus 322 ~~p~~~~~q~~~a~~~-~~~g~g~~~~~~--------~~~~~~l~~~~~~ll~---~~~~~~~~~~~~~~~~ 381 (402)
T 3ia7_A 322 LVPHFATEAAPSAERV-IELGLGSVLRPD--------QLEPASIREAVERLAA---DSAVRERVRRMQRDIL 381 (402)
T ss_dssp ECGGGCGGGHHHHHHH-HHTTSEEECCGG--------GCSHHHHHHHHHHHHH---CHHHHHHHHHHHHHHH
T ss_pred EeCCCcccHHHHHHHH-HHcCCEEEccCC--------CCCHHHHHHHHHHHHc---CHHHHHHHHHHHHHHh
Confidence 9999 99999999999 599999999876 7899999999999998 7899999999999887
No 12
>3h4t_A Glycosyltransferase GTFA, glycosyltransferase; vancomycin, teicoplanin, ORF1, natural products, antibiotic; HET: UDP; 1.15A {Amycolatopsis orientalis} SCOP: c.87.1.5 PDB: 3h4i_A* 1pn3_A* 1pnv_A*
Probab=100.00 E-value=2e-38 Score=322.67 Aligned_cols=367 Identities=18% Similarity=0.153 Sum_probs=246.5
Q ss_pred cEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCCCCccchhhhhhhhhccCCCeEEEEeeCCCccCCCCCCCCcccc
Q 010093 36 LHVFFFPFMAHGHMIPIVDMAKLFATRGVKASVITTPANAPYVSKSVERANELGIEMDVKTIKFPSVEAGLPEGCENLDA 115 (518)
Q Consensus 36 ~kIl~~~~~~~GH~~p~l~LA~~L~~rGH~Vt~~~~~~~~~~~~~~~~~~~~~g~~i~~~~ip~~~~~~~l~~~~~~~~~ 115 (518)
|||+|++.++.||++|+++||++|++|||+|++++++.+.+.+... ++.+..++..... . .......
T Consensus 1 MrIli~~~gt~Ghv~p~~~La~~L~~~Gh~V~v~~~~~~~~~v~~~---------g~~~~~l~~~~~~--~-~~~~~~~- 67 (404)
T 3h4t_A 1 MGVLITGCGSRGDTEPLVALAARLRELGADARMCLPPDYVERCAEV---------GVPMVPVGRAVRA--G-AREPGEL- 67 (404)
T ss_dssp -CEEEEEESSHHHHHHHHHHHHHHHHTTCCEEEEECGGGHHHHHHT---------TCCEEECSSCSSG--G-GSCTTCC-
T ss_pred CeEEEEeCCCCccHHHHHHHHHHHHHCCCeEEEEeCHHHHHHHHHc---------CCceeecCCCHHH--H-hccccCC-
Confidence 6899999999999999999999999999999999998877666544 5667766522111 1 0000000
Q ss_pred ccchhhhhhHHHHHHHHHhhHHHHHHHHhhCCCCEEEecCCCccH---HHHHHHcCCCeEEEecchHHHHHHHhhhhhcC
Q 010093 116 ITNEVNKGLIVKFFGATMKLQEPLEQLLQEHKPDCLVADTFFPWA---TDAAAKFGIPRLVFHGTSFFSLCASNCLALYE 192 (518)
Q Consensus 116 ~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~~pDlVI~D~~~~~~---~~iA~~lgiP~v~~~~~~~~~~~~~~~~~~~~ 192 (518)
.. .....+........+.+.+++ .+||+||+|..+..+ ..+|+.+|||++.+..++.....
T Consensus 68 --~~---~~~~~~~~~~~~~~~~l~~~~--~~pD~Vi~~~~~~~~~~a~~~A~~lgiP~v~~~~~p~~~~~--------- 131 (404)
T 3h4t_A 68 --PP---GAAEVVTEVVAEWFDKVPAAI--EGCDAVVTTGLLPAAVAVRSMAEKLGIPYRYTVLSPDHLPS--------- 131 (404)
T ss_dssp --CT---TCGGGHHHHHHHHHHHHHHHH--TTCSEEEEEECHHHHHHHHHHHHHHTCCEEEEESSGGGSGG---------
T ss_pred --HH---HHHHHHHHHHHHHHHHHHHHh--cCCCEEEECCchhhhhhhhhHHhhcCCCEEEEEcCCccCCC---------
Confidence 00 111122222333334444444 379999999665533 78999999999998876532100
Q ss_pred CCCCCCCCCCccccCCCCCCccccCCCCCcccccCCCCchHHHHHHHhhhhc-----------ccccEEEEcCccccchH
Q 010093 193 PHKKVSSDSEPFVMPHFPGEIKLTRNQLPDFVKQDMGDNDFSRLLKAIDDSD-----------LRSYGVAVNSFYELEPA 261 (518)
Q Consensus 193 ~~~~~~~~~~~~~~p~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~l~ns~~~L~~~ 261 (518)
+.+.. .... ... . ....+....++..... ...+..+.+..+.+.+.
T Consensus 132 --------------~~~~~--~~~~---~~~---~-~~~~~~~~~~~~~~~lgl~~~~~~~~~~~~~~~l~~~~~~l~p~ 188 (404)
T 3h4t_A 132 --------------EQSQA--ERDM---YNQ---G-ADRLFGDAVNSHRASIGLPPVEHLYDYGYTDQPWLAADPVLSPL 188 (404)
T ss_dssp --------------GSCHH--HHHH---HHH---H-HHHHHHHHHHHHHHHTTCCCCCCHHHHHHCSSCEECSCTTTSCC
T ss_pred --------------hhHHH--HHHH---HHH---H-HHHHhHHHHHHHHHHcCCCCCcchhhccccCCeEEeeCcceeCC
Confidence 00000 0000 000 0 0000000011100000 00112344444445432
Q ss_pred HHHHHHHhhCCcEEEeCccccCCcCchhhhhcCCCCCcChhHHhHhhhcCCCCcEEEEecCCcccCCHHHHHHHHHHHHh
Q 010093 262 YADHYRKALGRRAWHIGPVSLCNRNFEDKALRGKQASIDELECLKWLNSKQPYSVVYVCFGSLANFTSAQLMEIATGLEA 341 (518)
Q Consensus 262 ~~~~~~~~~~~~v~~vGpl~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~vIyvslGS~~~~~~~~~~~l~~al~~ 341 (518)
.++++++.++|++..+.. ...++++.+|++.. +++|||++||+.. ..+.+..++++++.
T Consensus 189 ------~~~~~~~~~~G~~~~~~~------------~~~~~~l~~~l~~~--~~~Vlv~~Gs~~~-~~~~~~~~~~al~~ 247 (404)
T 3h4t_A 189 ------RPTDLGTVQTGAWILPDQ------------RPLSAELEGFLRAG--SPPVYVGFGSGPA-PAEAARVAIEAVRA 247 (404)
T ss_dssp ------CTTCCSCCBCCCCCCCCC------------CCCCHHHHHHHHTS--SCCEEECCTTSCC-CTTHHHHHHHHHHH
T ss_pred ------CCCCCCeEEeCccccCCC------------CCCCHHHHHHHhcC--CCeEEEECCCCCC-cHHHHHHHHHHHHh
Confidence 235678889997765422 12467899999854 5699999999987 77889999999999
Q ss_pred CCCcEEEEEcCCCCCCCCCCCCCCChhHHHHHhcCCCcEeecCccHHHhhccCCCcccccccCchhHHHHHHhCCceecC
Q 010093 342 SGRNFIWVVSKNKNDGGEGGNEDWLPEGFEKRMEGKGLIIRGWAPQVLILDHEAVGGFVTHCGWNSTLEAVAAGVPLVTW 421 (518)
Q Consensus 342 ~~~~~i~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~nv~~~~~~pq~~lL~~~~~~~~ItHgG~~s~~eal~~GvP~l~~ 421 (518)
.++++||+++... .+.+ + + ++|+++.+|+||.++|++ +++||||||.||+.||+++|||+|++
T Consensus 248 ~~~~vv~~~g~~~----~~~~-~-~---------~~~v~~~~~~~~~~ll~~--~d~~v~~gG~~t~~Eal~~GvP~v~~ 310 (404)
T 3h4t_A 248 QGRRVVLSSGWAG----LGRI-D-E---------GDDCLVVGEVNHQVLFGR--VAAVVHHGGAGTTTAVTRAGAPQVVV 310 (404)
T ss_dssp TTCCEEEECTTTT----CCCS-S-C---------CTTEEEESSCCHHHHGGG--SSEEEECCCHHHHHHHHHHTCCEEEC
T ss_pred CCCEEEEEeCCcc----cccc-c-C---------CCCEEEecCCCHHHHHhh--CcEEEECCcHHHHHHHHHcCCCEEEc
Confidence 9999999988644 1111 1 1 569999999999999976 66699999999999999999999999
Q ss_pred CcccccchhHHHHHHhhhcceeeccccccccccCccChHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHhcCCCcHH
Q 010093 422 PVAAEQFYNEKMVNEILKIGVGVGIQKWCRIVGDFVKRETIEKAVNEIMVGDRAEEMRSRAKALGKMAKRAVENGGSSYS 501 (518)
Q Consensus 422 P~~~DQ~~na~~v~e~~G~G~~l~~~~~~~~~~~~~~~~~l~~av~~ll~~~~~~~~~~~a~~l~~~~~~~~~~~g~~~~ 501 (518)
|...||+.||+++ ++.|+|+.+... .++++.|.++|.++|+ ++|+++++++++.++ . +|. .
T Consensus 311 p~~~dQ~~na~~~-~~~G~g~~l~~~--------~~~~~~l~~ai~~ll~----~~~~~~~~~~~~~~~---~-~~~--~ 371 (404)
T 3h4t_A 311 PQKADQPYYAGRV-ADLGVGVAHDGP--------TPTVESLSAALATALT----PGIRARAAAVAGTIR---T-DGT--T 371 (404)
T ss_dssp CCSTTHHHHHHHH-HHHTSEEECSSS--------SCCHHHHHHHHHHHTS----HHHHHHHHHHHTTCC---C-CHH--H
T ss_pred CCcccHHHHHHHH-HHCCCEeccCcC--------CCCHHHHHHHHHHHhC----HHHHHHHHHHHHHHh---h-hHH--H
Confidence 9999999999999 599999999775 7899999999999993 489999999999888 4 332 3
Q ss_pred HHHHHHHHHH
Q 010093 502 DLSALIEELR 511 (518)
Q Consensus 502 ~~~~~~~~~~ 511 (518)
.+.+.|+.+.
T Consensus 372 ~~~~~i~~~~ 381 (404)
T 3h4t_A 372 VAAKLLLEAI 381 (404)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 3445555443
No 13
>2iyf_A OLED, oleandomycin glycosyltransferase; antibiotic resistance, glycosylation, enzyme, macrolide, carbohydrate; HET: ERY UDP; 1.7A {Streptomyces antibioticus}
Probab=100.00 E-value=1.1e-37 Score=320.39 Aligned_cols=370 Identities=18% Similarity=0.218 Sum_probs=244.2
Q ss_pred CCCcEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCCCCccchhhhhhhhhccCCCeEEEEeeCCCccCCCCCCCCc
Q 010093 33 IPQLHVFFFPFMAHGHMIPIVDMAKLFATRGVKASVITTPANAPYVSKSVERANELGIEMDVKTIKFPSVEAGLPEGCEN 112 (518)
Q Consensus 33 ~~~~kIl~~~~~~~GH~~p~l~LA~~L~~rGH~Vt~~~~~~~~~~~~~~~~~~~~~g~~i~~~~ip~~~~~~~l~~~~~~ 112 (518)
|+||||+|++.++.||++|++.||++|+++||+|++++++.+.+.+... ++.+..++.. .+.....
T Consensus 5 m~m~kIl~~~~~~~Gh~~p~~~la~~L~~~G~~V~~~~~~~~~~~~~~~---------g~~~~~~~~~-----~~~~~~~ 70 (430)
T 2iyf_A 5 TTPAHIAMFSIAAHGHVNPSLEVIRELVARGHRVTYAIPPVFADKVAAT---------GPRPVLYHST-----LPGPDAD 70 (430)
T ss_dssp ---CEEEEECCSCHHHHGGGHHHHHHHHHTTCEEEEEECGGGHHHHHTT---------SCEEEECCCC-----SCCTTSC
T ss_pred cccceEEEEeCCCCccccchHHHHHHHHHCCCeEEEEeCHHHHHHHHhC---------CCEEEEcCCc-----Ccccccc
Confidence 4578999999999999999999999999999999999998765443332 5667665421 1111111
Q ss_pred cccccchhhhhhHHHHHHHHHhhHHHHHHHHhhCCCCEEEecCCCccHHHHHHHcCCCeEEEecchHHHHHHHhhhhhcC
Q 010093 113 LDAITNEVNKGLIVKFFGATMKLQEPLEQLLQEHKPDCLVADTFFPWATDAAAKFGIPRLVFHGTSFFSLCASNCLALYE 192 (518)
Q Consensus 113 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~~pDlVI~D~~~~~~~~iA~~lgiP~v~~~~~~~~~~~~~~~~~~~~ 192 (518)
....... ....+..+...+......+.+++++.+||+||+|.+.+++..+|+++|||++.+++....... +.....
T Consensus 71 ~~~~~~~-~~~~~~~~~~~~~~~~~~l~~~l~~~~pD~Vi~d~~~~~~~~~A~~~giP~v~~~~~~~~~~~-~~~~~~-- 146 (430)
T 2iyf_A 71 PEAWGST-LLDNVEPFLNDAIQALPQLADAYADDIPDLVLHDITSYPARVLARRWGVPAVSLSPNLVAWKG-YEEEVA-- 146 (430)
T ss_dssp GGGGCSS-HHHHHHHHHHHHHHHHHHHHHHHTTSCCSEEEEETTCHHHHHHHHHHTCCEEEEESSCCCCTT-HHHHTH--
T ss_pred ccccchh-hHHHHHHHHHHHHHHHHHHHHHhhccCCCEEEECCccHHHHHHHHHcCCCEEEEecccccccc-cccccc--
Confidence 0000000 002222233334455677888888899999999987778999999999999998765320000 000000
Q ss_pred CCCCCCCCCCccccCCCCCCccccCCCCCcccccCCCCchHHHHHHHh------hhhcccccEEEEcCccccchHHHHHH
Q 010093 193 PHKKVSSDSEPFVMPHFPGEIKLTRNQLPDFVKQDMGDNDFSRLLKAI------DDSDLRSYGVAVNSFYELEPAYADHY 266 (518)
Q Consensus 193 ~~~~~~~~~~~~~~p~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~l~ns~~~L~~~~~~~~ 266 (518)
. ++..+. ...+.. .++. .....+..+. .......+.+++++...+++.
T Consensus 147 ---------~-----~~~~~~----~~~~~~-~~~~--~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~~~----- 200 (430)
T 2iyf_A 147 ---------E-----PMWREP----RQTERG-RAYY--ARFEAWLKENGITEHPDTFASHPPRSLVLIPKALQPH----- 200 (430)
T ss_dssp ---------H-----HHHHHH----HHSHHH-HHHH--HHHHHHHHHTTCCSCHHHHHHCCSSEEECSCGGGSTT-----
T ss_pred ---------c-----chhhhh----ccchHH-HHHH--HHHHHHHHHhCCCCCHHHHhcCCCcEEEeCcHHhCCC-----
Confidence 0 000000 000000 0000 0011111110 001113567888888777643
Q ss_pred HHhhCCc-EEEeCccccCCcCchhhhhcCCCCCcChhHHhHhhhcCCCCcEEEEecCCcccCCHHHHHHHHHHHHhC-CC
Q 010093 267 RKALGRR-AWHIGPVSLCNRNFEDKALRGKQASIDELECLKWLNSKQPYSVVYVCFGSLANFTSAQLMEIATGLEAS-GR 344 (518)
Q Consensus 267 ~~~~~~~-v~~vGpl~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~vIyvslGS~~~~~~~~~~~l~~al~~~-~~ 344 (518)
...++++ +++|||..... .+..+|....+++++||+++||......+.+..++++++.. +.
T Consensus 201 ~~~~~~~~v~~vG~~~~~~-----------------~~~~~~~~~~~~~~~v~v~~Gs~~~~~~~~~~~~~~~l~~~~~~ 263 (430)
T 2iyf_A 201 ADRVDEDVYTFVGACQGDR-----------------AEEGGWQRPAGAEKVVLVSLGSAFTKQPAFYRECVRAFGNLPGW 263 (430)
T ss_dssp GGGSCTTTEEECCCCC----------------------CCCCCCCTTCSEEEEEECTTTCC-CHHHHHHHHHHHTTCTTE
T ss_pred cccCCCccEEEeCCcCCCC-----------------CCCCCCccccCCCCeEEEEcCCCCCCcHHHHHHHHHHHhcCCCe
Confidence 1345677 99999854321 11124544444677999999999855678888899999886 78
Q ss_pred cEEEEEcCCCCCCCCCCCCCCChhHHHHHhcCCCcEeecCccHHHhhccCCCcccccccCchhHHHHHHhCCceecCCcc
Q 010093 345 NFIWVVSKNKNDGGEGGNEDWLPEGFEKRMEGKGLIIRGWAPQVLILDHEAVGGFVTHCGWNSTLEAVAAGVPLVTWPVA 424 (518)
Q Consensus 345 ~~i~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~nv~~~~~~pq~~lL~~~~~~~~ItHgG~~s~~eal~~GvP~l~~P~~ 424 (518)
+++|.++.+. +.+.+.. + ++|+.+.+|+||.++|+++++ ||||||+||+.||+++|+|+|++|..
T Consensus 264 ~~~~~~G~~~---~~~~l~~-~---------~~~v~~~~~~~~~~~l~~ad~--~v~~~G~~t~~Ea~~~G~P~i~~p~~ 328 (430)
T 2iyf_A 264 HLVLQIGRKV---TPAELGE-L---------PDNVEVHDWVPQLAILRQADL--FVTHAGAGGSQEGLATATPMIAVPQA 328 (430)
T ss_dssp EEEEECC------CGGGGCS-C---------CTTEEEESSCCHHHHHTTCSE--EEECCCHHHHHHHHHTTCCEEECCCS
T ss_pred EEEEEeCCCC---ChHHhcc-C---------CCCeEEEecCCHHHHhhccCE--EEECCCccHHHHHHHhCCCEEECCCc
Confidence 9989887644 1111111 2 469999999999999988655 99999999999999999999999999
Q ss_pred cccchhHHHHHHhhhcceeeccccccccccCccChHHHHHHHHHHhcCChHHHHHHHHHHHHHHHH
Q 010093 425 AEQFYNEKMVNEILKIGVGVGIQKWCRIVGDFVKRETIEKAVNEIMVGDRAEEMRSRAKALGKMAK 490 (518)
Q Consensus 425 ~DQ~~na~~v~e~~G~G~~l~~~~~~~~~~~~~~~~~l~~av~~ll~~~~~~~~~~~a~~l~~~~~ 490 (518)
.||..||.++ ++.|+|+.+... .+++++|.++|.++|+ |+++++++.++++.+.
T Consensus 329 ~~q~~~a~~~-~~~g~g~~~~~~--------~~~~~~l~~~i~~ll~---~~~~~~~~~~~~~~~~ 382 (430)
T 2iyf_A 329 VDQFGNADML-QGLGVARKLATE--------EATADLLRETALALVD---DPEVARRLRRIQAEMA 382 (430)
T ss_dssp HHHHHHHHHH-HHTTSEEECCCC---------CCHHHHHHHHHHHHH---CHHHHHHHHHHHHHHH
T ss_pred cchHHHHHHH-HHcCCEEEcCCC--------CCCHHHHHHHHHHHHc---CHHHHHHHHHHHHHHH
Confidence 9999999999 599999998765 6899999999999998 7799999999999887
No 14
>2yjn_A ERYCIII, glycosyltransferase; transferase, cytochrome P450; 3.09A {Saccharopolyspora erythraea}
Probab=100.00 E-value=3.6e-38 Score=324.85 Aligned_cols=387 Identities=13% Similarity=0.127 Sum_probs=239.0
Q ss_pred CCcEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCCCCccchhhhhhhhhccCCCeEEEEeeCCCccCCCCCCC-Cc
Q 010093 34 PQLHVFFFPFMAHGHMIPIVDMAKLFATRGVKASVITTPANAPYVSKSVERANELGIEMDVKTIKFPSVEAGLPEGC-EN 112 (518)
Q Consensus 34 ~~~kIl~~~~~~~GH~~p~l~LA~~L~~rGH~Vt~~~~~~~~~~~~~~~~~~~~~g~~i~~~~ip~~~~~~~l~~~~-~~ 112 (518)
+||||+|++.++.||++|+++||++|+++||+|+|++++.+.+.+... ++.+..++......++.... ..
T Consensus 19 ~~mrIl~~~~~~~GHv~p~l~la~~L~~~GheV~~~~~~~~~~~v~~~---------G~~~~~i~~~~~~~~~~~~~~~~ 89 (441)
T 2yjn_A 19 SHMRVVFSSMASKSHLFGLVPLAWAFRAAGHEVRVVASPALTEDITAA---------GLTAVPVGTDVDLVDFMTHAGHD 89 (441)
T ss_dssp CCCEEEEECCSCHHHHTTTHHHHHHHHHTTCEEEEEECGGGHHHHHTT---------TCCEEECSCCCCHHHHHHHTTHH
T ss_pred CccEEEEEcCCCcchHhHHHHHHHHHHHCCCeEEEEeCchhHHHHHhC---------CCceeecCCccchHHHhhhhhcc
Confidence 568999999999999999999999999999999999998765554433 56777775321000000000 00
Q ss_pred c------ccc----cchhhhhhH----HHHHHHHH-----h-hHHHHHHHHhhCCCCEEEecCCCccHHHHHHHcCCCeE
Q 010093 113 L------DAI----TNEVNKGLI----VKFFGATM-----K-LQEPLEQLLQEHKPDCLVADTFFPWATDAAAKFGIPRL 172 (518)
Q Consensus 113 ~------~~~----~~~~~~~~~----~~~~~~~~-----~-~~~~l~~ll~~~~pDlVI~D~~~~~~~~iA~~lgiP~v 172 (518)
. ... ........+ ..+...+. . ....+.+++++++||+||+|.+.+++..+|+.+|||++
T Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~pDlVv~d~~~~~~~~aA~~lgiP~v 169 (441)
T 2yjn_A 90 IIDYVRSLDFSERDPATLTWEHLLGMQTVLTPTFYALMSPDTLIEGMVSFCRKWRPDLVIWEPLTFAAPIAAAVTGTPHA 169 (441)
T ss_dssp HHHHHTTCCCTTCCGGGGSHHHHHHHHHHHHHHTTTTSSCHHHHHHHHHHHHHHCCSEEEECTTCTHHHHHHHHHTCCEE
T ss_pred cccccccccccccCcchhhhhhhhhHHHHHHHHHHhhcchHHHHHHHHHHHHhcCCCEEEecCcchhHHHHHHHcCCCEE
Confidence 0 000 000000111 11111111 1 45566667778999999999877789999999999999
Q ss_pred EEecchHHHHHHHhhhhhcCCCCCCCCCCCccccCCCCCCccccCCCCCcccccCCCCchHHHHHHHhhh-hcc----cc
Q 010093 173 VFHGTSFFSLCASNCLALYEPHKKVSSDSEPFVMPHFPGEIKLTRNQLPDFVKQDMGDNDFSRLLKAIDD-SDL----RS 247 (518)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~-~~~----~~ 247 (518)
.+...+.........+.... ...|.... .... ...+..+..+... ... ..
T Consensus 170 ~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~--------~~~~------~~~l~~~~~~~g~~~~~~~~~~~ 224 (441)
T 2yjn_A 170 RLLWGPDITTRARQNFLGLL-----------PDQPEEHR--------EDPL------AEWLTWTLEKYGGPAFDEEVVVG 224 (441)
T ss_dssp EECSSCCHHHHHHHHHHHHG-----------GGSCTTTC--------CCHH------HHHHHHHHHHTTCCCCCGGGTSC
T ss_pred EEecCCCcchhhhhhhhhhc-----------cccccccc--------cchH------HHHHHHHHHHcCCCCCCccccCC
Confidence 98654422111110000000 00000000 0000 0001122222111 000 11
Q ss_pred cEEEEcCccccchHHHHHHHHhhCCcEEEeCccccCCcCchhhhhcCCCCCcChhHHhHhhhcCCCCcEEEEecCCcccC
Q 010093 248 YGVAVNSFYELEPAYADHYRKALGRRAWHIGPVSLCNRNFEDKALRGKQASIDELECLKWLNSKQPYSVVYVCFGSLANF 327 (518)
Q Consensus 248 ~~~l~ns~~~L~~~~~~~~~~~~~~~v~~vGpl~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~vIyvslGS~~~~ 327 (518)
+..+......++++ ..++ . ..+++.... .+.++.+|++..+++++|||++||....
T Consensus 225 ~~~l~~~~~~~~~~------~~~~-~-~~~~~~~~~----------------~~~~~~~~l~~~~~~~~v~v~~Gs~~~~ 280 (441)
T 2yjn_A 225 QWTIDPAPAAIRLD------TGLK-T-VGMRYVDYN----------------GPSVVPEWLHDEPERRRVCLTLGISSRE 280 (441)
T ss_dssp SSEEECSCGGGSCC------CCCC-E-EECCCCCCC----------------SSCCCCGGGSSCCSSCEEEEEC------
T ss_pred CeEEEecCccccCC------CCCC-C-CceeeeCCC----------------CCcccchHhhcCCCCCEEEEECCCCccc
Confidence 22233222222210 0111 0 112211100 1234668988666678999999998763
Q ss_pred ---CHHHHHHHHHHHHhCCCcEEEEEcCCCCCCCCCCCCCCChhHHHHHhcCCCcEeecCccHHHhhccCCCcccccccC
Q 010093 328 ---TSAQLMEIATGLEASGRNFIWVVSKNKNDGGEGGNEDWLPEGFEKRMEGKGLIIRGWAPQVLILDHEAVGGFVTHCG 404 (518)
Q Consensus 328 ---~~~~~~~l~~al~~~~~~~i~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~nv~~~~~~pq~~lL~~~~~~~~ItHgG 404 (518)
..+.+..++++++..++++||++++.. .+.+.. + ++|+++.+|+||.++|+. +++||||||
T Consensus 281 ~~~~~~~~~~~~~al~~~~~~~v~~~g~~~----~~~l~~-~---------~~~v~~~~~~~~~~ll~~--ad~~V~~~G 344 (441)
T 2yjn_A 281 NSIGQVSIEELLGAVGDVDAEIIATFDAQQ----LEGVAN-I---------PDNVRTVGFVPMHALLPT--CAATVHHGG 344 (441)
T ss_dssp ----CCSTTTTHHHHHTSSSEEEECCCTTT----TSSCSS-C---------CSSEEECCSCCHHHHGGG--CSEEEECCC
T ss_pred ccChHHHHHHHHHHHHcCCCEEEEEECCcc----hhhhcc-C---------CCCEEEecCCCHHHHHhh--CCEEEECCC
Confidence 346677889999999999999987543 112221 2 459999999999999966 666999999
Q ss_pred chhHHHHHHhCCceecCCcccccchhHHHHHHhhhcceeeccccccccccCccChHHHHHHHHHHhcCChHHHHHHHHHH
Q 010093 405 WNSTLEAVAAGVPLVTWPVAAEQFYNEKMVNEILKIGVGVGIQKWCRIVGDFVKRETIEKAVNEIMVGDRAEEMRSRAKA 484 (518)
Q Consensus 405 ~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~e~~G~G~~l~~~~~~~~~~~~~~~~~l~~av~~ll~~~~~~~~~~~a~~ 484 (518)
.||+.||+++|||+|++|...||+.||+++ ++.|+|+.+... ++++++|.++|.++|+ |++|++++++
T Consensus 345 ~~t~~Ea~~~G~P~i~~p~~~dQ~~na~~l-~~~g~g~~~~~~--------~~~~~~l~~~i~~ll~---~~~~~~~~~~ 412 (441)
T 2yjn_A 345 PGSWHTAAIHGVPQVILPDGWDTGVRAQRT-QEFGAGIALPVP--------ELTPDQLRESVKRVLD---DPAHRAGAAR 412 (441)
T ss_dssp HHHHHHHHHTTCCEEECCCSHHHHHHHHHH-HHHTSEEECCTT--------TCCHHHHHHHHHHHHH---CHHHHHHHHH
T ss_pred HHHHHHHHHhCCCEEEeCCcccHHHHHHHH-HHcCCEEEcccc--------cCCHHHHHHHHHHHhc---CHHHHHHHHH
Confidence 999999999999999999999999999999 599999998765 7899999999999998 7899999999
Q ss_pred HHHHHHHHHhcCCCcHHHHHHHHHHHH
Q 010093 485 LGKMAKRAVENGGSSYSDLSALIEELR 511 (518)
Q Consensus 485 l~~~~~~~~~~~g~~~~~~~~~~~~~~ 511 (518)
+++.++ ..+|. +.+.+.|+.+.
T Consensus 413 ~~~~~~---~~~~~--~~~~~~i~~~~ 434 (441)
T 2yjn_A 413 MRDDML---AEPSP--AEVVGICEELA 434 (441)
T ss_dssp HHHHHH---TSCCH--HHHHHHHHHHH
T ss_pred HHHHHH---cCCCH--HHHHHHHHHHH
Confidence 999988 55543 33455555543
No 15
>2p6p_A Glycosyl transferase; X-RAY-diffraction,urdamycina-biosynthesis; 1.88A {Streptomyces fradiae}
Probab=100.00 E-value=1.4e-37 Score=314.66 Aligned_cols=367 Identities=16% Similarity=0.165 Sum_probs=245.9
Q ss_pred cEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCCCCccchhhhhhhhhccCCCeEEEEeeCCCccCCCCC---CCC-
Q 010093 36 LHVFFFPFMAHGHMIPIVDMAKLFATRGVKASVITTPANAPYVSKSVERANELGIEMDVKTIKFPSVEAGLPE---GCE- 111 (518)
Q Consensus 36 ~kIl~~~~~~~GH~~p~l~LA~~L~~rGH~Vt~~~~~~~~~~~~~~~~~~~~~g~~i~~~~ip~~~~~~~l~~---~~~- 111 (518)
|||+|++.++.||++|+++||++|+++||+|++++++.+.+.+... ++.+..++.......+.. ...
T Consensus 1 MrIl~~~~~~~Gh~~p~~~la~~L~~~Gh~V~~~~~~~~~~~~~~~---------g~~~~~~~~~~~~~~~~~~~~~~~~ 71 (384)
T 2p6p_A 1 MRILFVAAGSPATVFALAPLATAARNAGHQVVMAANQDMGPVVTGV---------GLPAVATTDLPIRHFITTDREGRPE 71 (384)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHHHHHTTCEEEEEECGGGHHHHHHT---------TCCEEESCSSCHHHHHHBCTTSCBC
T ss_pred CEEEEEeCCccchHhHHHHHHHHHHHCCCEEEEEeCHHHHHHHHhC---------CCEEEEeCCcchHHHHhhhcccCcc
Confidence 6999999999999999999999999999999999997654444332 466666642110000000 000
Q ss_pred ccccccchhhhhhH-HH-HHHHHHhhHHHHHHHHhhCCCCEEEecCCCccHHHHHHHcCCCeEEEecchHHHHHHHhhhh
Q 010093 112 NLDAITNEVNKGLI-VK-FFGATMKLQEPLEQLLQEHKPDCLVADTFFPWATDAAAKFGIPRLVFHGTSFFSLCASNCLA 189 (518)
Q Consensus 112 ~~~~~~~~~~~~~~-~~-~~~~~~~~~~~l~~ll~~~~pDlVI~D~~~~~~~~iA~~lgiP~v~~~~~~~~~~~~~~~~~ 189 (518)
... ........+ .. +..........+.+++++.+||+||+|.+..++..+|+.+|||++.+.+.+.
T Consensus 72 ~~~--~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~pD~Vi~~~~~~~~~~~a~~~giP~v~~~~~~~---------- 139 (384)
T 2p6p_A 72 AIP--SDPVAQARFTGRWFARMAASSLPRMLDFSRAWRPDLIVGGTMSYVAPLLALHLGVPHARQTWDAV---------- 139 (384)
T ss_dssp CCC--CSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCSEEEEETTCTHHHHHHHHHTCCEEEECCSSC----------
T ss_pred ccC--cchHHHHHHHHHHHHhhHHHHHHHHHHHHhccCCcEEEECcchhhHHHHHHhcCCCEEEeccCCc----------
Confidence 000 000000111 11 1222334456777778889999999998777888999999999998754210
Q ss_pred hcCCCCCCCCCCCccccCCCCCCccccCCCCCcccccCCCCchHHHHHHHhh-hhcccccEEEEcCccccchHHHHHHHH
Q 010093 190 LYEPHKKVSSDSEPFVMPHFPGEIKLTRNQLPDFVKQDMGDNDFSRLLKAID-DSDLRSYGVAVNSFYELEPAYADHYRK 268 (518)
Q Consensus 190 ~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~ns~~~L~~~~~~~~~~ 268 (518)
.. ..+. .. . ......+..+.. ......+.++.++...++++ .
T Consensus 140 ------------~~---~~~~-----------~~---~--~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~------~ 182 (384)
T 2p6p_A 140 ------------DA---DGIH-----------PG---A--DAELRPELSELGLERLPAPDLFIDICPPSLRPA------N 182 (384)
T ss_dssp ------------CC---TTTH-----------HH---H--HHHTHHHHHHTTCSSCCCCSEEEECSCGGGSCT------T
T ss_pred ------------cc---chhh-----------HH---H--HHHHHHHHHHcCCCCCCCCCeEEEECCHHHCCC------C
Confidence 00 0000 00 0 000111111110 00111456777777666532 1
Q ss_pred hhC-CcEEEeCccccCCcCchhhhhcCCCCCcChhHHhHhhhcCCCCcEEEEecCCcccC-----CHHHHHHHHHHHHhC
Q 010093 269 ALG-RRAWHIGPVSLCNRNFEDKALRGKQASIDELECLKWLNSKQPYSVVYVCFGSLANF-----TSAQLMEIATGLEAS 342 (518)
Q Consensus 269 ~~~-~~v~~vGpl~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~vIyvslGS~~~~-----~~~~~~~l~~al~~~ 342 (518)
.++ .++.+++. . .+.++.+|++..+++++|||++||.... +.+.+..++++++..
T Consensus 183 ~~~~~~~~~~~~---~----------------~~~~~~~~l~~~~~~~~v~v~~Gs~~~~~~~~~~~~~~~~~~~al~~~ 243 (384)
T 2p6p_A 183 AAPARMMRHVAT---S----------------RQCPLEPWMYTRDTRQRVLVTSGSRVAKESYDRNFDFLRGLAKDLVRW 243 (384)
T ss_dssp SCCCEECCCCCC---C----------------CCCBCCHHHHCCCSSCEEEEECSSSSSCCSSCCCCTTHHHHHHHHHTT
T ss_pred CCCCCceEecCC---C----------------CCCCCCchhhcCCCCCEEEEECCCCCccccccccHHHHHHHHHHHhcC
Confidence 111 22222211 0 0234557887655677999999998864 457888999999999
Q ss_pred CCcEEEEEcCCCCCCCCCCCCCCChhHHHHHhcCCCcEeecCccHHHhhccCCCcccccccCchhHHHHHHhCCceecCC
Q 010093 343 GRNFIWVVSKNKNDGGEGGNEDWLPEGFEKRMEGKGLIIRGWAPQVLILDHEAVGGFVTHCGWNSTLEAVAAGVPLVTWP 422 (518)
Q Consensus 343 ~~~~i~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~nv~~~~~~pq~~lL~~~~~~~~ItHgG~~s~~eal~~GvP~l~~P 422 (518)
+++++|++++.. . +.+. ..++|+.+ +|+||.++|++ +++||||||+||+.||+++|+|+|++|
T Consensus 244 ~~~~~~~~g~~~-----------~-~~l~--~~~~~v~~-~~~~~~~~l~~--~d~~v~~~G~~t~~Ea~~~G~P~v~~p 306 (384)
T 2p6p_A 244 DVELIVAAPDTV-----------A-EALR--AEVPQARV-GWTPLDVVAPT--CDLLVHHAGGVSTLTGLSAGVPQLLIP 306 (384)
T ss_dssp TCEEEEECCHHH-----------H-HHHH--HHCTTSEE-ECCCHHHHGGG--CSEEEECSCTTHHHHHHHTTCCEEECC
T ss_pred CcEEEEEeCCCC-----------H-HhhC--CCCCceEE-cCCCHHHHHhh--CCEEEeCCcHHHHHHHHHhCCCEEEcc
Confidence 999999976422 1 1221 12679999 99999999976 666999999999999999999999999
Q ss_pred cccccchhHHHHHHhhhcceeeccccccccccCccChHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHhcCCCcHHH
Q 010093 423 VAAEQFYNEKMVNEILKIGVGVGIQKWCRIVGDFVKRETIEKAVNEIMVGDRAEEMRSRAKALGKMAKRAVENGGSSYSD 502 (518)
Q Consensus 423 ~~~DQ~~na~~v~e~~G~G~~l~~~~~~~~~~~~~~~~~l~~av~~ll~~~~~~~~~~~a~~l~~~~~~~~~~~g~~~~~ 502 (518)
...||+.||.++ ++.|+|+.+... ..++++|.++|.++|+ |++++++++++++.++ ..+|.
T Consensus 307 ~~~dq~~~a~~~-~~~g~g~~~~~~--------~~~~~~l~~~i~~ll~---~~~~~~~~~~~~~~~~---~~~~~---- 367 (384)
T 2p6p_A 307 KGSVLEAPARRV-ADYGAAIALLPG--------EDSTEAIADSCQELQA---KDTYARRAQDLSREIS---GMPLP---- 367 (384)
T ss_dssp CSHHHHHHHHHH-HHHTSEEECCTT--------CCCHHHHHHHHHHHHH---CHHHHHHHHHHHHHHH---TSCCH----
T ss_pred CcccchHHHHHH-HHCCCeEecCcC--------CCCHHHHHHHHHHHHc---CHHHHHHHHHHHHHHH---hCCCH----
Confidence 999999999999 599999998765 6899999999999998 7899999999999999 55544
Q ss_pred HHHHHHHHHhhhcc
Q 010093 503 LSALIEELRLSRHQ 516 (518)
Q Consensus 503 ~~~~~~~~~~~~~~ 516 (518)
+++++.+..+-||
T Consensus 368 -~~~~~~i~~~~~~ 380 (384)
T 2p6p_A 368 -ATVVTALEQLAHH 380 (384)
T ss_dssp -HHHHHHHHHHHHH
T ss_pred -HHHHHHHHHHhhh
Confidence 4455555555444
No 16
>4fzr_A SSFS6; structural genomics, PSI-biology, protein structure initiati enzyme discovery for natural product biosynthesis, natPro; 2.40A {Streptomyces SP} PDB: 4g2t_A*
Probab=100.00 E-value=4e-35 Score=298.10 Aligned_cols=357 Identities=16% Similarity=0.154 Sum_probs=219.1
Q ss_pred CCCcEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCCCCccchhhhhhhhhccCCCeEEEEeeCCCccCCCC----C
Q 010093 33 IPQLHVFFFPFMAHGHMIPIVDMAKLFATRGVKASVITTPANAPYVSKSVERANELGIEMDVKTIKFPSVEAGLP----E 108 (518)
Q Consensus 33 ~~~~kIl~~~~~~~GH~~p~l~LA~~L~~rGH~Vt~~~~~~~~~~~~~~~~~~~~~g~~i~~~~ip~~~~~~~l~----~ 108 (518)
..+|||+|++.++.||++|+++||++|.++||+|++++++.+.+.+... ++.+..++.......+. .
T Consensus 13 ~~~MrIl~~~~~~~gh~~~~~~La~~L~~~GheV~v~~~~~~~~~~~~~---------G~~~~~~~~~~~~~~~~~~~~~ 83 (398)
T 4fzr_A 13 GSHMRILVIAGCSEGFVMPLVPLSWALRAAGHEVLVAASENMGPTVTGA---------GLPFAPTCPSLDMPEVLSWDRE 83 (398)
T ss_dssp --CCEEEEECCSSHHHHGGGHHHHHHHHHTTCEEEEEEEGGGHHHHHHT---------TCCEEEEESSCCHHHHHSBCTT
T ss_pred CCceEEEEEcCCCcchHHHHHHHHHHHHHCCCEEEEEcCHHHHHHHHhC---------CCeeEecCCccchHhhhhhhcc
Confidence 3578999999999999999999999999999999999987665555443 45666665211000000 0
Q ss_pred CCCccccccchhh-hhhHHHHHHHHHhhHHHHHHHHhhCCCCEEEecCCCccHHHHHHHcCCCeEEEecchHHHHHHHhh
Q 010093 109 GCENLDAITNEVN-KGLIVKFFGATMKLQEPLEQLLQEHKPDCLVADTFFPWATDAAAKFGIPRLVFHGTSFFSLCASNC 187 (518)
Q Consensus 109 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~ll~~~~pDlVI~D~~~~~~~~iA~~lgiP~v~~~~~~~~~~~~~~~ 187 (518)
............. ......+..........+.+++++++||+||+|...+++..+|+.+|||++.+.............
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~pDlVv~d~~~~~~~~~a~~~giP~v~~~~~~~~~~~~~~~ 163 (398)
T 4fzr_A 84 GNRTTMPREEKPLLEHIGRGYGRLVLRMRDEALALAERWKPDLVLTETYSLTGPLVAATLGIPWIEQSIRLASPELIKSA 163 (398)
T ss_dssp SCBCCCCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCSEEEEETTCTHHHHHHHHHTCCEEEECCSSCCCHHHHHH
T ss_pred CcccccccchhhHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCEEEECccccHHHHHHHhhCCCEEEeccCCCCchhhhHH
Confidence 0000000000000 011122223334556678888889999999999877789999999999999876542110000000
Q ss_pred hhhcCCCCCCCCCCCccccCCCCCCccccCCCCCcccccCCCCchHHHHHHHhhh-hcccccEEEEcCccccchHHHHHH
Q 010093 188 LALYEPHKKVSSDSEPFVMPHFPGEIKLTRNQLPDFVKQDMGDNDFSRLLKAIDD-SDLRSYGVAVNSFYELEPAYADHY 266 (518)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~ns~~~L~~~~~~~~ 266 (518)
+.. .+.....+... .....+..+......+...
T Consensus 164 ---------------------~~~--------------------~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----- 197 (398)
T 4fzr_A 164 ---------------------GVG--------------------ELAPELAELGLTDFPDPLLSIDVCPPSMEAQ----- 197 (398)
T ss_dssp ---------------------HHH--------------------HTHHHHHTTTCSSCCCCSEEEECSCGGGC-------
T ss_pred ---------------------HHH--------------------HHHHHHHHcCCCCCCCCCeEEEeCChhhCCC-----
Confidence 000 00000000000 0011122222222222211
Q ss_pred HHhhCCcEEEeCccccCCcCchhhhhcCCCCCcChhHHhHhhhcCCCCcEEEEecCCcccC--------CHHHHHHHHHH
Q 010093 267 RKALGRRAWHIGPVSLCNRNFEDKALRGKQASIDELECLKWLNSKQPYSVVYVCFGSLANF--------TSAQLMEIATG 338 (518)
Q Consensus 267 ~~~~~~~v~~vGpl~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~vIyvslGS~~~~--------~~~~~~~l~~a 338 (518)
.......+.++++.. .+.++.+|+...+++++||+++||.... ..+.+..++++
T Consensus 198 ~~~~~~~~~~~~~~~------------------~~~~~~~~~~~~~~~~~v~v~~G~~~~~~~~~~~~~~~~~~~~~~~a 259 (398)
T 4fzr_A 198 PKPGTTKMRYVPYNG------------------RNDQVPSWVFEERKQPRLCLTFGTRVPLPNTNTIPGGLSLLQALSQE 259 (398)
T ss_dssp --CCCEECCCCCCCC------------------SSCCCCHHHHSCCSSCEEECC----------------CCSHHHHHHH
T ss_pred CCCCCCCeeeeCCCC------------------CCCCCchhhhcCCCCCEEEEEccCcccccccccccchHHHHHHHHHH
Confidence 000001111111100 1234556776655678999999998753 45678889999
Q ss_pred HHhCCCcEEEEEcCCCCCCCCCCCCCCChhHHHHHhcCCCcEeecCccHHHhhccCCCcccccccCchhHHHHHHhCCce
Q 010093 339 LEASGRNFIWVVSKNKNDGGEGGNEDWLPEGFEKRMEGKGLIIRGWAPQVLILDHEAVGGFVTHCGWNSTLEAVAAGVPL 418 (518)
Q Consensus 339 l~~~~~~~i~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~nv~~~~~~pq~~lL~~~~~~~~ItHgG~~s~~eal~~GvP~ 418 (518)
+++.+.+++|+.++.. .+.+.. .++|+++.+|+|+.++|++ +++||||||.||+.||+++|+|+
T Consensus 260 l~~~~~~~v~~~~~~~----~~~l~~----------~~~~v~~~~~~~~~~ll~~--ad~~v~~gG~~t~~Ea~~~G~P~ 323 (398)
T 4fzr_A 260 LPKLGFEVVVAVSDKL----AQTLQP----------LPEGVLAAGQFPLSAIMPA--CDVVVHHGGHGTTLTCLSEGVPQ 323 (398)
T ss_dssp GGGGTCEEEECCCC----------------------CCTTEEEESCCCHHHHGGG--CSEEEECCCHHHHHHHHHTTCCE
T ss_pred HHhCCCEEEEEeCCcc----hhhhcc----------CCCcEEEeCcCCHHHHHhh--CCEEEecCCHHHHHHHHHhCCCE
Confidence 9999999999887643 111111 2569999999999999988 55599999999999999999999
Q ss_pred ecCCcccccchhHHHHHHhhhcceeeccccccccccCccChHHHHHHHHHHhcCChHHHHHHHHHHHHHHHH
Q 010093 419 VTWPVAAEQFYNEKMVNEILKIGVGVGIQKWCRIVGDFVKRETIEKAVNEIMVGDRAEEMRSRAKALGKMAK 490 (518)
Q Consensus 419 l~~P~~~DQ~~na~~v~e~~G~G~~l~~~~~~~~~~~~~~~~~l~~av~~ll~~~~~~~~~~~a~~l~~~~~ 490 (518)
|++|...||+.||.++ ++.|+|+.+... .++++.|.++|.++|+ |++++++++++++.+.
T Consensus 324 v~~p~~~~q~~~a~~~-~~~g~g~~~~~~--------~~~~~~l~~ai~~ll~---~~~~~~~~~~~~~~~~ 383 (398)
T 4fzr_A 324 VSVPVIAEVWDSARLL-HAAGAGVEVPWE--------QAGVESVLAACARIRD---DSSYVGNARRLAAEMA 383 (398)
T ss_dssp EECCCSGGGHHHHHHH-HHTTSEEECC---------------CHHHHHHHHHH---CTHHHHHHHHHHHHHT
T ss_pred EecCCchhHHHHHHHH-HHcCCEEecCcc--------cCCHHHHHHHHHHHHh---CHHHHHHHHHHHHHHH
Confidence 9999999999999999 599999999876 7899999999999998 7799999999999887
No 17
>3oti_A CALG3; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD C0T; 1.60A {Micromonospora echinospora} PDB: 3d0q_A* 3d0r_A*
Probab=100.00 E-value=7.2e-35 Score=296.19 Aligned_cols=361 Identities=16% Similarity=0.174 Sum_probs=235.0
Q ss_pred CCCcEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCCCCccchhhhhhhhhccCCCeEEEEeeCCCccCCCCC----
Q 010093 33 IPQLHVFFFPFMAHGHMIPIVDMAKLFATRGVKASVITTPANAPYVSKSVERANELGIEMDVKTIKFPSVEAGLPE---- 108 (518)
Q Consensus 33 ~~~~kIl~~~~~~~GH~~p~l~LA~~L~~rGH~Vt~~~~~~~~~~~~~~~~~~~~~g~~i~~~~ip~~~~~~~l~~---- 108 (518)
.++|||+|++.++.||++|+++||++|.++||+|+++++ .+.+.+... ++.+..++..........
T Consensus 18 ~~~MrIl~~~~~~~Ghv~~~~~La~~L~~~GheV~v~~~-~~~~~~~~~---------G~~~~~~~~~~~~~~~~~~~~~ 87 (398)
T 3oti_A 18 GRHMRVLFVSSPGIGHLFPLIQLAWGFRTAGHDVLIAVA-EHADRAAAA---------GLEVVDVAPDYSAVKVFEQVAK 87 (398)
T ss_dssp -CCCEEEEECCSSHHHHGGGHHHHHHHHHTTCEEEEEES-SCHHHHHTT---------TCEEEESSTTCCHHHHHHHHHH
T ss_pred hhcCEEEEEcCCCcchHhHHHHHHHHHHHCCCEEEEecc-chHHHHHhC---------CCeeEecCCccCHHHHhhhccc
Confidence 356899999999999999999999999999999999999 665555433 566666642100000000
Q ss_pred -CC--------CccccccchhhhhhHHHHHHHHHhhHHHHHHHHhhCCCCEEEecCCCccHHHHHHHcCCCeEEEecchH
Q 010093 109 -GC--------ENLDAITNEVNKGLIVKFFGATMKLQEPLEQLLQEHKPDCLVADTFFPWATDAAAKFGIPRLVFHGTSF 179 (518)
Q Consensus 109 -~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~~pDlVI~D~~~~~~~~iA~~lgiP~v~~~~~~~ 179 (518)
.. ...... ......+..........+.+++++++||+||+|...+++..+|+.+|||++.......
T Consensus 88 ~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~l~~~l~~~~pDlVv~d~~~~~~~~aA~~~giP~v~~~~~~~ 162 (398)
T 3oti_A 88 DNPRFAETVATRPAIDL-----EEWGVQIAAVNRPLVDGTMALVDDYRPDLVVYEQGATVGLLAADRAGVPAVQRNQSAW 162 (398)
T ss_dssp HCHHHHHTGGGSCCCSG-----GGGHHHHHHHHGGGHHHHHHHHHHHCCSEEEEETTCHHHHHHHHHHTCCEEEECCTTC
T ss_pred CCccccccccCChhhhH-----HHHHHHHHHHHHHHHHHHHHHHHHcCCCEEEECchhhHHHHHHHHcCCCEEEEeccCC
Confidence 00 000000 0222233444456677888999999999999998888899999999999997653310
Q ss_pred HHHHHHhhhhhcCCCCCCCCCCCccccCCCCCCccccCCCCCcccccCCCCchHHHHHHHhhhhcccccEEEEcCccccc
Q 010093 180 FSLCASNCLALYEPHKKVSSDSEPFVMPHFPGEIKLTRNQLPDFVKQDMGDNDFSRLLKAIDDSDLRSYGVAVNSFYELE 259 (518)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ns~~~L~ 259 (518)
.. ..+.. . +..+ +.....+...........+......+.
T Consensus 163 ~~-------------------------~~~~~----~---~~~~---------l~~~~~~~~~~~~~~~~~~~~~~~~~~ 201 (398)
T 3oti_A 163 RT-------------------------RGMHR----S---IASF---------LTDLMDKHQVSLPEPVATIESFPPSLL 201 (398)
T ss_dssp CC-------------------------TTHHH----H---HHTT---------CHHHHHHTTCCCCCCSEEECSSCGGGG
T ss_pred Cc-------------------------cchhh----H---HHHH---------HHHHHHHcCCCCCCCCeEEEeCCHHHC
Confidence 00 00000 0 0000 111111111111111122211111111
Q ss_pred hHHHHHHHHhhCCcEEEeCccccCCcCchhhhhcCCCCCcChhHHhHhhhcCCCCcEEEEecCCcccC--CHHHHHHHHH
Q 010093 260 PAYADHYRKALGRRAWHIGPVSLCNRNFEDKALRGKQASIDELECLKWLNSKQPYSVVYVCFGSLANF--TSAQLMEIAT 337 (518)
Q Consensus 260 ~~~~~~~~~~~~~~v~~vGpl~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~vIyvslGS~~~~--~~~~~~~l~~ 337 (518)
.+ .......+.++ |. ..+..+.+|+...+++++||+++||.... ..+.+..+++
T Consensus 202 ~~-----~~~~~~~~~~~-~~------------------~~~~~~~~~~~~~~~~~~v~v~~G~~~~~~~~~~~~~~~~~ 257 (398)
T 3oti_A 202 LE-----AEPEGWFMRWV-PY------------------GGGAVLGDRLPPVPARPEVAITMGTIELQAFGIGAVEPIIA 257 (398)
T ss_dssp TT-----SCCCSBCCCCC-CC------------------CCCEECCSSCCCCCSSCEEEECCTTTHHHHHCGGGHHHHHH
T ss_pred CC-----CCCCCCCcccc-CC------------------CCCcCCchhhhcCCCCCEEEEEcCCCccccCcHHHHHHHHH
Confidence 00 00000001111 00 01233445666555678999999999653 6778889999
Q ss_pred HHHhCCCcEEEEEcCCCCCCCCCCCCCCChhHHHHHhcCCCcEeecCccHHHhhccCCCcccccccCchhHHHHHHhCCc
Q 010093 338 GLEASGRNFIWVVSKNKNDGGEGGNEDWLPEGFEKRMEGKGLIIRGWAPQVLILDHEAVGGFVTHCGWNSTLEAVAAGVP 417 (518)
Q Consensus 338 al~~~~~~~i~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~nv~~~~~~pq~~lL~~~~~~~~ItHgG~~s~~eal~~GvP 417 (518)
+++..+.+++|+.++.. .+.+.. + ++|+++.+|+|+.++|++ +++||||||.||+.||+++|+|
T Consensus 258 ~l~~~~~~~v~~~g~~~----~~~l~~-~---------~~~v~~~~~~~~~~ll~~--ad~~v~~~G~~t~~Eal~~G~P 321 (398)
T 3oti_A 258 AAGEVDADFVLALGDLD----ISPLGT-L---------PRNVRAVGWTPLHTLLRT--CTAVVHHGGGGTVMTAIDAGIP 321 (398)
T ss_dssp HHHTSSSEEEEECTTSC----CGGGCS-C---------CTTEEEESSCCHHHHHTT--CSEEEECCCHHHHHHHHHHTCC
T ss_pred HHHcCCCEEEEEECCcC----hhhhcc-C---------CCcEEEEccCCHHHHHhh--CCEEEECCCHHHHHHHHHhCCC
Confidence 99999999999987643 112221 2 569999999999999988 5559999999999999999999
Q ss_pred eecCCcccccchhH--HHHHHhhhcceeeccccccccccCccChHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHhc
Q 010093 418 LVTWPVAAEQFYNE--KMVNEILKIGVGVGIQKWCRIVGDFVKRETIEKAVNEIMVGDRAEEMRSRAKALGKMAKRAVEN 495 (518)
Q Consensus 418 ~l~~P~~~DQ~~na--~~v~e~~G~G~~l~~~~~~~~~~~~~~~~~l~~av~~ll~~~~~~~~~~~a~~l~~~~~~~~~~ 495 (518)
+|++|...||..|| .++ ++.|+|+.+... +.+++.|. ++|+ |++++++++++++.+. ..
T Consensus 322 ~v~~p~~~dq~~~a~~~~~-~~~g~g~~~~~~--------~~~~~~l~----~ll~---~~~~~~~~~~~~~~~~---~~ 382 (398)
T 3oti_A 322 QLLAPDPRDQFQHTAREAV-SRRGIGLVSTSD--------KVDADLLR----RLIG---DESLRTAAREVREEMV---AL 382 (398)
T ss_dssp EEECCCTTCCSSCTTHHHH-HHHTSEEECCGG--------GCCHHHHH----HHHH---CHHHHHHHHHHHHHHH---TS
T ss_pred EEEcCCCchhHHHHHHHHH-HHCCCEEeeCCC--------CCCHHHHH----HHHc---CHHHHHHHHHHHHHHH---hC
Confidence 99999999999999 999 599999999875 67888776 8898 7899999999999988 55
Q ss_pred CCCcHHHHHHHHHHH
Q 010093 496 GGSSYSDLSALIEEL 510 (518)
Q Consensus 496 ~g~~~~~~~~~~~~~ 510 (518)
.+. ..+.+.++.+
T Consensus 383 ~~~--~~~~~~l~~l 395 (398)
T 3oti_A 383 PTP--AETVRRIVER 395 (398)
T ss_dssp CCH--HHHHHHHHHH
T ss_pred CCH--HHHHHHHHHH
Confidence 544 3344444443
No 18
>3tsa_A SPNG, NDP-rhamnosyltransferase; glycosyltransferase; HET: GLC; 1.70A {Saccharopolyspora spinosa} PDB: 3uyk_A* 3uyl_A*
Probab=100.00 E-value=7.2e-33 Score=280.70 Aligned_cols=366 Identities=12% Similarity=0.114 Sum_probs=231.1
Q ss_pred CcEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCCCCccchhhhhhhhhccCCCeEEEEe-eCCCccC-C----CCC
Q 010093 35 QLHVFFFPFMAHGHMIPIVDMAKLFATRGVKASVITTPANAPYVSKSVERANELGIEMDVKTI-KFPSVEA-G----LPE 108 (518)
Q Consensus 35 ~~kIl~~~~~~~GH~~p~l~LA~~L~~rGH~Vt~~~~~~~~~~~~~~~~~~~~~g~~i~~~~i-p~~~~~~-~----l~~ 108 (518)
+|||+|++.++.||++|++.|+++|.++||+|++++++.+.+.+... ++.+..+ ..+.... . ...
T Consensus 1 ~MrIl~~~~~~~gh~~~~~~la~~L~~~GheV~v~~~~~~~~~~~~~---------g~~~~~~~~~~~~~~~~~~~~~~~ 71 (391)
T 3tsa_A 1 HMRVLVVPLPYPTHLMAMVPLCWALQASGHEVLIAAPPELQATAHGA---------GLTTAGIRGNDRTGDTGGTTQLRF 71 (391)
T ss_dssp CCEEEEECCSCHHHHHTTHHHHHHHHHTTCEEEEEECHHHHHHHHHB---------TCEEEEC--------------CCS
T ss_pred CcEEEEEcCCCcchhhhHHHHHHHHHHCCCEEEEecChhhHHHHHhC---------CCceeeecCCccchhhhhhhcccc
Confidence 37999999999999999999999999999999999986554444332 4555555 2110000 0 000
Q ss_pred CCCccccccchhhhhhHHHHHHHHHhh-------HHHHHHHHhhCCCCEEEecCCCccHHHHHHHcCCCeEEEecchHHH
Q 010093 109 GCENLDAITNEVNKGLIVKFFGATMKL-------QEPLEQLLQEHKPDCLVADTFFPWATDAAAKFGIPRLVFHGTSFFS 181 (518)
Q Consensus 109 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~l~~ll~~~~pDlVI~D~~~~~~~~iA~~lgiP~v~~~~~~~~~ 181 (518)
........... .....+......+ ...+.+++++++||+||+|.+.+++..+|+.+|||++.+.......
T Consensus 72 ~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~PD~Vv~~~~~~~~~~aa~~~giP~v~~~~~~~~~ 148 (391)
T 3tsa_A 72 PNPAFGQRDTE---AGRQLWEQTASNVAQSSLDQLPEYLRLAEAWRPSVLLVDVCALIGRVLGGLLDLPVVLHRWGVDPT 148 (391)
T ss_dssp CCGGGGCTTSH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCSEEEEETTCHHHHHHHHHTTCCEEEECCSCCCT
T ss_pred cccccccccch---hHHHHHHHHHHHHhhcchhhHHHHHHHHHhcCCCEEEeCcchhHHHHHHHHhCCCEEEEecCCccc
Confidence 00000000000 1111222222233 6778888889999999999877788889999999999875432000
Q ss_pred HHHHhhhhhcCCCCCCCCCCCccccCCCCCCccccCCCCCcccccCCCCchHHHHHHHhhhh-cccccEEEEcCccccch
Q 010093 182 LCASNCLALYEPHKKVSSDSEPFVMPHFPGEIKLTRNQLPDFVKQDMGDNDFSRLLKAIDDS-DLRSYGVAVNSFYELEP 260 (518)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~ns~~~L~~ 260 (518)
.. .....+.. .+.....++... ....+..+.....+++.
T Consensus 149 -----------------------------~~--~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 188 (391)
T 3tsa_A 149 -----------------------------AG--PFSDRAHE---------LLDPVCRHHGLTGLPTPELILDPCPPSLQA 188 (391)
T ss_dssp -----------------------------TT--HHHHHHHH---------HHHHHHHHTTSSSSCCCSEEEECSCGGGSC
T ss_pred -----------------------------cc--cccchHHH---------HHHHHHHHcCCCCCCCCceEEEecChhhcC
Confidence 00 00000000 011111111100 00112222222222211
Q ss_pred HHHHHHHHhhCCcEEEeCccccCCcCchhhhhcCCCCCcChhHHhHhhhcCCCCcEEEEecCCccc--CC-HHHHHHHHH
Q 010093 261 AYADHYRKALGRRAWHIGPVSLCNRNFEDKALRGKQASIDELECLKWLNSKQPYSVVYVCFGSLAN--FT-SAQLMEIAT 337 (518)
Q Consensus 261 ~~~~~~~~~~~~~v~~vGpl~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~vIyvslGS~~~--~~-~~~~~~l~~ 337 (518)
. .......+.++ |.. .+..+..|+...+++++||+++||... .. .+.+..+++
T Consensus 189 ~-----~~~~~~~~~~~-p~~------------------~~~~~~~~~~~~~~~~~vlv~~G~~~~~~~~~~~~~~~~~~ 244 (391)
T 3tsa_A 189 S-----DAPQGAPVQYV-PYN------------------GSGAFPAWGAARTSARRVCICMGRMVLNATGPAPLLRAVAA 244 (391)
T ss_dssp T-----TSCCCEECCCC-CCC------------------CCEECCGGGSSCCSSEEEEEECCHHHHHHHCSHHHHHHHHH
T ss_pred C-----CCCccCCeeee-cCC------------------CCcCCCchhhcCCCCCEEEEEcCCCCCcccchHHHHHHHHH
Confidence 0 00000111111 100 122344676655567899999999854 23 777888888
Q ss_pred HHHhC-CCcEEEEEcCCCCCCCCCCCCCCChhHHHHHhcCCCcEeecCccHHHhhccCCCcccccccCchhHHHHHHhCC
Q 010093 338 GLEAS-GRNFIWVVSKNKNDGGEGGNEDWLPEGFEKRMEGKGLIIRGWAPQVLILDHEAVGGFVTHCGWNSTLEAVAAGV 416 (518)
Q Consensus 338 al~~~-~~~~i~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~nv~~~~~~pq~~lL~~~~~~~~ItHgG~~s~~eal~~Gv 416 (518)
+ ++. +.+++|..++.. .+.+.. .++|+++.+|+|+.++|+. +++||||||.||+.||+++|+
T Consensus 245 ~-~~~p~~~~v~~~~~~~----~~~l~~----------~~~~v~~~~~~~~~~ll~~--ad~~v~~~G~~t~~Ea~~~G~ 307 (391)
T 3tsa_A 245 A-TELPGVEAVIAVPPEH----RALLTD----------LPDNARIAESVPLNLFLRT--CELVICAGGSGTAFTATRLGI 307 (391)
T ss_dssp H-HTSTTEEEEEECCGGG----GGGCTT----------CCTTEEECCSCCGGGTGGG--CSEEEECCCHHHHHHHHHTTC
T ss_pred h-ccCCCeEEEEEECCcc----hhhccc----------CCCCEEEeccCCHHHHHhh--CCEEEeCCCHHHHHHHHHhCC
Confidence 8 888 789999877532 111111 2569999999999999966 666999999999999999999
Q ss_pred ceecCCcccccchhHHHHHHhhhcceeecc--ccccccccCccChHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHh
Q 010093 417 PLVTWPVAAEQFYNEKMVNEILKIGVGVGI--QKWCRIVGDFVKRETIEKAVNEIMVGDRAEEMRSRAKALGKMAKRAVE 494 (518)
Q Consensus 417 P~l~~P~~~DQ~~na~~v~e~~G~G~~l~~--~~~~~~~~~~~~~~~l~~av~~ll~~~~~~~~~~~a~~l~~~~~~~~~ 494 (518)
|+|++|...||..|+.++ ++.|+|+.+.. . ..+++.|.++|.++|+ |+++++++.++++.+. .
T Consensus 308 P~v~~p~~~~q~~~a~~~-~~~g~g~~~~~~~~--------~~~~~~l~~ai~~ll~---~~~~~~~~~~~~~~~~---~ 372 (391)
T 3tsa_A 308 PQLVLPQYFDQFDYARNL-AAAGAGICLPDEQA--------QSDHEQFTDSIATVLG---DTGFAAAAIKLSDEIT---A 372 (391)
T ss_dssp CEEECCCSTTHHHHHHHH-HHTTSEEECCSHHH--------HTCHHHHHHHHHHHHT---CTHHHHHHHHHHHHHH---T
T ss_pred CEEecCCcccHHHHHHHH-HHcCCEEecCcccc--------cCCHHHHHHHHHHHHc---CHHHHHHHHHHHHHHH---c
Confidence 999999999999999999 59999999976 5 6899999999999998 7799999999999887 5
Q ss_pred cCCCcHHHHHHHHHHH
Q 010093 495 NGGSSYSDLSALIEEL 510 (518)
Q Consensus 495 ~~g~~~~~~~~~~~~~ 510 (518)
.++. ..+.+.|+.+
T Consensus 373 ~~~~--~~~~~~i~~~ 386 (391)
T 3tsa_A 373 MPHP--AALVRTLENT 386 (391)
T ss_dssp SCCH--HHHHHHHHHC
T ss_pred CCCH--HHHHHHHHHH
Confidence 5444 3344444443
No 19
>3otg_A CALG1; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD; 2.08A {Micromonospora echinospora} PDB: 3oth_A*
Probab=100.00 E-value=8.9e-31 Score=267.12 Aligned_cols=357 Identities=19% Similarity=0.250 Sum_probs=232.9
Q ss_pred CCCcEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCCCCccchhhhhhhhhccCCCeEEEEeeCCCccCCC------
Q 010093 33 IPQLHVFFFPFMAHGHMIPIVDMAKLFATRGVKASVITTPANAPYVSKSVERANELGIEMDVKTIKFPSVEAGL------ 106 (518)
Q Consensus 33 ~~~~kIl~~~~~~~GH~~p~l~LA~~L~~rGH~Vt~~~~~~~~~~~~~~~~~~~~~g~~i~~~~ip~~~~~~~l------ 106 (518)
..+|||+|++.++.||++|++.||++|.++||+|++++++.+.+.+... ++.+..++.... .++
T Consensus 18 ~~~MrIl~~~~~~~Gh~~~~~~la~~L~~~GheV~v~~~~~~~~~~~~~---------g~~~~~~~~~~~-~~~~~~~~~ 87 (412)
T 3otg_A 18 GRHMRVLFASLGTHGHTYPLLPLATAARAAGHEVTFATGEGFAGTLRKL---------GFEPVATGMPVF-DGFLAALRI 87 (412)
T ss_dssp CCSCEEEEECCSSHHHHGGGHHHHHHHHHTTCEEEEEECGGGHHHHHHT---------TCEEEECCCCHH-HHHHHHHHH
T ss_pred cceeEEEEEcCCCcccHHHHHHHHHHHHHCCCEEEEEccHHHHHHHHhc---------CCceeecCcccc-cchhhhhhh
Confidence 3578999999999999999999999999999999999997654333332 566666652000 000
Q ss_pred --CC-CCCccccccchhhhhhHHHHHHH-HHhhHHHHHHHHhhCCCCEEEecCCCccHHHHHHHcCCCeEEEecchHHHH
Q 010093 107 --PE-GCENLDAITNEVNKGLIVKFFGA-TMKLQEPLEQLLQEHKPDCLVADTFFPWATDAAAKFGIPRLVFHGTSFFSL 182 (518)
Q Consensus 107 --~~-~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~ll~~~~pDlVI~D~~~~~~~~iA~~lgiP~v~~~~~~~~~~ 182 (518)
.. ........... ......+... .......+.+++++++||+||+|....++..+|+.+|||+|..........
T Consensus 88 ~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~l~~~l~~~~pDvVv~~~~~~~~~~aa~~~giP~v~~~~~~~~~~ 165 (412)
T 3otg_A 88 RFDTDSPEGLTPEQLS--ELPQIVFGRVIPQRVFDELQPVIERLRPDLVVQEISNYGAGLAALKAGIPTICHGVGRDTPD 165 (412)
T ss_dssp HHSCSCCTTCCHHHHT--TSHHHHHHTHHHHHHHHHHHHHHHHHCCSEEEEETTCHHHHHHHHHHTCCEEEECCSCCCCS
T ss_pred hhcccCCccCChhHhh--HHHHHHHhccchHHHHHHHHHHHHhcCCCEEEECchhhHHHHHHHHcCCCEEEecccccCch
Confidence 00 00000000000 0111222222 233456778888889999999997777788899999999988644311000
Q ss_pred HHHhhhhhcCCCCCCCCCCCccccCCCCCCccccCCCCCcccccCCCCchHHHHHHHhhhh------cccccEEEEcCcc
Q 010093 183 CASNCLALYEPHKKVSSDSEPFVMPHFPGEIKLTRNQLPDFVKQDMGDNDFSRLLKAIDDS------DLRSYGVAVNSFY 256 (518)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~l~ns~~ 256 (518)
+... .+.. .+.....+.... ....+.++..+-.
T Consensus 166 -------------------------~~~~-------~~~~---------~~~~~~~~~g~~~~~~~~~~~~d~~i~~~~~ 204 (412)
T 3otg_A 166 -------------------------DLTR-------SIEE---------EVRGLAQRLGLDLPPGRIDGFGNPFIDIFPP 204 (412)
T ss_dssp -------------------------HHHH-------HHHH---------HHHHHHHHTTCCCCSSCCGGGGCCEEECSCG
T ss_pred -------------------------hhhH-------HHHH---------HHHHHHHHcCCCCCcccccCCCCeEEeeCCH
Confidence 0000 0000 001111110000 1223334443333
Q ss_pred ccchHHHHHHHHhhCCcEEEeCccccCCcCchhhhhcCCCCCcChhHHhHh-hhcCCCCcEEEEecCCcccCCHHHHHHH
Q 010093 257 ELEPAYADHYRKALGRRAWHIGPVSLCNRNFEDKALRGKQASIDELECLKW-LNSKQPYSVVYVCFGSLANFTSAQLMEI 335 (518)
Q Consensus 257 ~L~~~~~~~~~~~~~~~v~~vGpl~~~~~~~~~~~~~~~~~~~~~~~l~~~-l~~~~~~~vIyvslGS~~~~~~~~~~~l 335 (518)
.++.. ...+......+-+.... ......+| ....+++++||+++||......+.+..+
T Consensus 205 ~~~~~-----~~~~~~~~~~~~~~~~~----------------~~~~~~~~~~~~~~~~~~vlv~~G~~~~~~~~~~~~~ 263 (412)
T 3otg_A 205 SLQEP-----EFRARPRRHELRPVPFA----------------EQGDLPAWLSSRDTARPLVYLTLGTSSGGTVEVLRAA 263 (412)
T ss_dssp GGSCH-----HHHTCTTEEECCCCCCC----------------CCCCCCGGGGGSCTTSCEEEEECTTTTCSCHHHHHHH
T ss_pred HhcCC-----cccCCCCcceeeccCCC----------------CCCCCCCccccccCCCCEEEEEcCCCCcCcHHHHHHH
Confidence 33311 11111111111111110 01223455 2323457799999999976667888899
Q ss_pred HHHHHhCCCcEEEEEcCCCCCCCCCCCCCCChhHHHHHhcCCCcEeecCccHHHhhccCCCcccccccCchhHHHHHHhC
Q 010093 336 ATGLEASGRNFIWVVSKNKNDGGEGGNEDWLPEGFEKRMEGKGLIIRGWAPQVLILDHEAVGGFVTHCGWNSTLEAVAAG 415 (518)
Q Consensus 336 ~~al~~~~~~~i~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~nv~~~~~~pq~~lL~~~~~~~~ItHgG~~s~~eal~~G 415 (518)
++++++.+.+++|..++.. ..+.+.. + ++|+.+.+|+|+.++|+++++ ||+|||.+|+.||+++|
T Consensus 264 ~~~l~~~~~~~~~~~g~~~---~~~~l~~-~---------~~~v~~~~~~~~~~~l~~ad~--~v~~~g~~t~~Ea~a~G 328 (412)
T 3otg_A 264 IDGLAGLDADVLVASGPSL---DVSGLGE-V---------PANVRLESWVPQAALLPHVDL--VVHHGGSGTTLGALGAG 328 (412)
T ss_dssp HHHHHTSSSEEEEECCSSC---CCTTCCC-C---------CTTEEEESCCCHHHHGGGCSE--EEESCCHHHHHHHHHHT
T ss_pred HHHHHcCCCEEEEEECCCC---Chhhhcc-C---------CCcEEEeCCCCHHHHHhcCcE--EEECCchHHHHHHHHhC
Confidence 9999999999999987654 1222222 2 459999999999999988554 99999999999999999
Q ss_pred CceecCCcccccchhHHHHHHhhhcceeeccccccccccCccChHHHHHHHHHHhcCChHHHHHHHHHHHHHHHH
Q 010093 416 VPLVTWPVAAEQFYNEKMVNEILKIGVGVGIQKWCRIVGDFVKRETIEKAVNEIMVGDRAEEMRSRAKALGKMAK 490 (518)
Q Consensus 416 vP~l~~P~~~DQ~~na~~v~e~~G~G~~l~~~~~~~~~~~~~~~~~l~~av~~ll~~~~~~~~~~~a~~l~~~~~ 490 (518)
+|+|++|...||..|+..+ ++.|+|..+... ..++++|.++|.++|+ |+++++++.+.++++.
T Consensus 329 ~P~v~~p~~~~q~~~~~~v-~~~g~g~~~~~~--------~~~~~~l~~ai~~ll~---~~~~~~~~~~~~~~~~ 391 (412)
T 3otg_A 329 VPQLSFPWAGDSFANAQAV-AQAGAGDHLLPD--------NISPDSVSGAAKRLLA---EESYRAGARAVAAEIA 391 (412)
T ss_dssp CCEEECCCSTTHHHHHHHH-HHHTSEEECCGG--------GCCHHHHHHHHHHHHH---CHHHHHHHHHHHHHHH
T ss_pred CCEEecCCchhHHHHHHHH-HHcCCEEecCcc--------cCCHHHHHHHHHHHHh---CHHHHHHHHHHHHHHh
Confidence 9999999999999999999 599999999876 7899999999999998 7899999999888887
No 20
>3s2u_A UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape pyrophosphoryl-undecaprenol N-acetylglucosamine...; N-acetylglucosaminyl transferase; HET: UD1; 2.23A {Pseudomonas aeruginosa}
Probab=99.95 E-value=2.1e-26 Score=230.31 Aligned_cols=312 Identities=15% Similarity=0.139 Sum_probs=191.5
Q ss_pred cEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCCCCcc--chhhhhhhhhccCCCeEEEEeeCCCccCCCCCCCCcc
Q 010093 36 LHVFFFPFMAHGHMIPIVDMAKLFATRGVKASVITTPANAP--YVSKSVERANELGIEMDVKTIKFPSVEAGLPEGCENL 113 (518)
Q Consensus 36 ~kIl~~~~~~~GH~~p~l~LA~~L~~rGH~Vt~~~~~~~~~--~~~~~~~~~~~~g~~i~~~~ip~~~~~~~l~~~~~~~ 113 (518)
.||+|...++.||++|.++||++|.++||+|+|++++...+ .+++. ++.++.++.. +++... ..
T Consensus 3 ~~i~i~~GGTgGHi~palala~~L~~~g~~V~~vg~~~g~e~~~v~~~---------g~~~~~i~~~----~~~~~~-~~ 68 (365)
T 3s2u_A 3 GNVLIMAGGTGGHVFPALACAREFQARGYAVHWLGTPRGIENDLVPKA---------GLPLHLIQVS----GLRGKG-LK 68 (365)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHHHHHTTCEEEEEECSSSTHHHHTGGG---------TCCEEECC---------------
T ss_pred CcEEEEcCCCHHHHHHHHHHHHHHHhCCCEEEEEECCchHhhchhhhc---------CCcEEEEECC----CcCCCC-HH
Confidence 48999999999999999999999999999999999865321 22222 4566666532 222110 00
Q ss_pred ccccchhhhhhHHHHHHHHHhhHHHHHHHHhhCCCCEEEecCCCc--cHHHHHHHcCCCeEEEecchHHHHHHHhhhhhc
Q 010093 114 DAITNEVNKGLIVKFFGATMKLQEPLEQLLQEHKPDCLVADTFFP--WATDAAAKFGIPRLVFHGTSFFSLCASNCLALY 191 (518)
Q Consensus 114 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~~pDlVI~D~~~~--~~~~iA~~lgiP~v~~~~~~~~~~~~~~~~~~~ 191 (518)
... .....+... .....+++++.+||+||++.... .+..+|+.+|||+++.-.
T Consensus 69 ~~~------~~~~~~~~~----~~~~~~~l~~~~PDvVi~~g~~~s~p~~laA~~~~iP~vihe~--------------- 123 (365)
T 3s2u_A 69 SLV------KAPLELLKS----LFQALRVIRQLRPVCVLGLGGYVTGPGGLAARLNGVPLVIHEQ--------------- 123 (365)
T ss_dssp ----------CHHHHHHH----HHHHHHHHHHHCCSEEEECSSSTHHHHHHHHHHTTCCEEEEEC---------------
T ss_pred HHH------HHHHHHHHH----HHHHHHHHHhcCCCEEEEcCCcchHHHHHHHHHcCCCEEEEec---------------
Confidence 000 111111111 22455678889999999996554 456789999999986311
Q ss_pred CCCCCCCCCCCccccCCCCCCccccCCCCCcccccCCCCchHHHHHHHhhhhcccccEEEEcCccccchHHHHHHHHhhC
Q 010093 192 EPHKKVSSDSEPFVMPHFPGEIKLTRNQLPDFVKQDMGDNDFSRLLKAIDDSDLRSYGVAVNSFYELEPAYADHYRKALG 271 (518)
Q Consensus 192 ~~~~~~~~~~~~~~~p~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ns~~~L~~~~~~~~~~~~~ 271 (518)
..+||+.+ ++.. +.++.+ ...+++..+ ..
T Consensus 124 ------------n~~~G~~n-----------------------r~l~------~~a~~v-~~~~~~~~~---------~~ 152 (365)
T 3s2u_A 124 ------------NAVAGTAN-----------------------RSLA------PIARRV-CEAFPDTFP---------AS 152 (365)
T ss_dssp ------------SSSCCHHH-----------------------HHHG------GGCSEE-EESSTTSSC---------C-
T ss_pred ------------chhhhhHH-----------------------Hhhc------ccccee-eeccccccc---------Cc
Confidence 01122111 1110 111222 222222111 11
Q ss_pred CcEEEeCccccCCcCchhhhhcCCCCCcChhHHhHhhhcCCCCcEEEEecCCcccCCHHHHHHHHHHHHhC----CCcEE
Q 010093 272 RRAWHIGPVSLCNRNFEDKALRGKQASIDELECLKWLNSKQPYSVVYVCFGSLANFTSAQLMEIATGLEAS----GRNFI 347 (518)
Q Consensus 272 ~~v~~vGpl~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~vIyvslGS~~~~~~~~~~~l~~al~~~----~~~~i 347 (518)
.++.++|......... +.. ......+++++|++..||... ....+.+.+++..+ +..++
T Consensus 153 ~k~~~~g~pvr~~~~~-------------~~~--~~~~~~~~~~~ilv~gGs~g~--~~~~~~~~~al~~l~~~~~~~vi 215 (365)
T 3s2u_A 153 DKRLTTGNPVRGELFL-------------DAH--ARAPLTGRRVNLLVLGGSLGA--EPLNKLLPEALAQVPLEIRPAIR 215 (365)
T ss_dssp --CEECCCCCCGGGCC-------------CTT--SSCCCTTSCCEEEECCTTTTC--SHHHHHHHHHHHTSCTTTCCEEE
T ss_pred CcEEEECCCCchhhcc-------------chh--hhcccCCCCcEEEEECCcCCc--cccchhhHHHHHhcccccceEEE
Confidence 4566777433221100 000 011112346689999999764 33344566777765 34677
Q ss_pred EEEcCCCCCCCCCCCCCCChhHHHH--HhcCCCcEeecCccH-HHhhccCCCcccccccCchhHHHHHHhCCceecCCcc
Q 010093 348 WVVSKNKNDGGEGGNEDWLPEGFEK--RMEGKGLIIRGWAPQ-VLILDHEAVGGFVTHCGWNSTLEAVAAGVPLVTWPVA 424 (518)
Q Consensus 348 ~~~~~~~~~~~~~~~~~~lp~~~~~--~~~~~nv~~~~~~pq-~~lL~~~~~~~~ItHgG~~s~~eal~~GvP~l~~P~~ 424 (518)
|.++... . +.... ...+.|+.+.+|+++ .++++.+++ +|||+|.+|+.|++++|+|+|.+|+-
T Consensus 216 ~~~G~~~-----------~-~~~~~~~~~~~~~~~v~~f~~dm~~~l~~aDl--vI~raG~~Tv~E~~a~G~P~Ilip~p 281 (365)
T 3s2u_A 216 HQAGRQH-----------A-EITAERYRTVAVEADVAPFISDMAAAYAWADL--VICRAGALTVSELTAAGLPAFLVPLP 281 (365)
T ss_dssp EECCTTT-----------H-HHHHHHHHHTTCCCEEESCCSCHHHHHHHCSE--EEECCCHHHHHHHHHHTCCEEECC--
T ss_pred EecCccc-----------c-ccccceecccccccccccchhhhhhhhccceE--EEecCCcchHHHHHHhCCCeEEeccC
Confidence 7776543 1 11111 123568999999986 579977555 99999999999999999999999963
Q ss_pred ----cccchhHHHHHHhhhcceeeccccccccccCccChHHHHHHHHHHhcCChHHHHHH
Q 010093 425 ----AEQFYNEKMVNEILKIGVGVGIQKWCRIVGDFVKRETIEKAVNEIMVGDRAEEMRS 480 (518)
Q Consensus 425 ----~DQ~~na~~v~e~~G~G~~l~~~~~~~~~~~~~~~~~l~~av~~ll~~~~~~~~~~ 480 (518)
.+|..||+.+ ++.|+|+.+... +++++.|.++|.++|+ |++.++
T Consensus 282 ~~~~~~Q~~NA~~l-~~~G~a~~l~~~--------~~~~~~L~~~i~~ll~---d~~~~~ 329 (365)
T 3s2u_A 282 HAIDDHQTRNAEFL-VRSGAGRLLPQK--------STGAAELAAQLSEVLM---HPETLR 329 (365)
T ss_dssp ---CCHHHHHHHHH-HTTTSEEECCTT--------TCCHHHHHHHHHHHHH---CTHHHH
T ss_pred CCCCcHHHHHHHHH-HHCCCEEEeecC--------CCCHHHHHHHHHHHHC---CHHHHH
Confidence 5899999999 599999999776 7899999999999998 544443
No 21
>2o6l_A UDP-glucuronosyltransferase 2B7; drug metabolism, rossman, MAD, enzyme, nucleotide binding, sugar,UDP-glucuronosyltransferase, UGT; 1.80A {Homo sapiens}
Probab=99.95 E-value=4.1e-27 Score=209.43 Aligned_cols=162 Identities=23% Similarity=0.350 Sum_probs=140.3
Q ss_pred ChhHHhHhhhcCCCCcEEEEecCCccc-CCHHHHHHHHHHHHhCCCcEEEEEcCCCCCCCCCCCCCCChhHHHHHhcCCC
Q 010093 300 DELECLKWLNSKQPYSVVYVCFGSLAN-FTSAQLMEIATGLEASGRNFIWVVSKNKNDGGEGGNEDWLPEGFEKRMEGKG 378 (518)
Q Consensus 300 ~~~~l~~~l~~~~~~~vIyvslGS~~~-~~~~~~~~l~~al~~~~~~~i~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~n 378 (518)
+++++.+|++..+++++|||++||... ...+.+..++++++..+++++|+.++.. . . .+ ++|
T Consensus 7 l~~~~~~~l~~~~~~~~vlv~~Gs~~~~~~~~~~~~~~~al~~~~~~~~~~~g~~~----~---~-~~---------~~~ 69 (170)
T 2o6l_A 7 LPKEMEDFVQSSGENGVVVFSLGSMVSNMTEERANVIASALAQIPQKVLWRFDGNK----P---D-TL---------GLN 69 (170)
T ss_dssp CCHHHHHHHHTTTTTCEEEEECCSCCTTCCHHHHHHHHHHHTTSSSEEEEECCSSC----C---T-TC---------CTT
T ss_pred CCHHHHHHHHcCCCCCEEEEECCCCcccCCHHHHHHHHHHHHhCCCeEEEEECCcC----c---c-cC---------CCc
Confidence 578999999877667899999999863 5678889999999999999999987543 0 0 12 459
Q ss_pred cEeecCccHHHhhccCCCcccccccCchhHHHHHHhCCceecCCcccccchhHHHHHHhhhcceeeccccccccccCccC
Q 010093 379 LIIRGWAPQVLILDHEAVGGFVTHCGWNSTLEAVAAGVPLVTWPVAAEQFYNEKMVNEILKIGVGVGIQKWCRIVGDFVK 458 (518)
Q Consensus 379 v~~~~~~pq~~lL~~~~~~~~ItHgG~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~e~~G~G~~l~~~~~~~~~~~~~~ 458 (518)
+++.+|+||.+++.|+.+++||||||++|+.||+++|+|+|++|...||..||.++ ++.|+|+.+... +++
T Consensus 70 v~~~~~~~~~~~l~~~~ad~~I~~~G~~t~~Ea~~~G~P~i~~p~~~~Q~~na~~l-~~~g~g~~~~~~--------~~~ 140 (170)
T 2o6l_A 70 TRLYKWIPQNDLLGHPKTRAFITHGGANGIYEAIYHGIPMVGIPLFADQPDNIAHM-KARGAAVRVDFN--------TMS 140 (170)
T ss_dssp EEEESSCCHHHHHTSTTEEEEEECCCHHHHHHHHHHTCCEEECCCSTTHHHHHHHH-HTTTSEEECCTT--------TCC
T ss_pred EEEecCCCHHHHhcCCCcCEEEEcCCccHHHHHHHcCCCEEeccchhhHHHHHHHH-HHcCCeEEeccc--------cCC
Confidence 99999999999998788888999999999999999999999999999999999999 599999999765 789
Q ss_pred hHHHHHHHHHHhcCChHHHHHHHHHHHHHHHH
Q 010093 459 RETIEKAVNEIMVGDRAEEMRSRAKALGKMAK 490 (518)
Q Consensus 459 ~~~l~~av~~ll~~~~~~~~~~~a~~l~~~~~ 490 (518)
.++|.++|.++++ +++|+++++++++.++
T Consensus 141 ~~~l~~~i~~ll~---~~~~~~~a~~~~~~~~ 169 (170)
T 2o6l_A 141 STDLLNALKRVIN---DPSYKENVMKLSRIQH 169 (170)
T ss_dssp HHHHHHHHHHHHH---CHHHHHHHHHHC----
T ss_pred HHHHHHHHHHHHc---CHHHHHHHHHHHHHhh
Confidence 9999999999998 7799999999999887
No 22
>1f0k_A MURG, UDP-N-acetylglucosamine-N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol...; rossmann fold, transferase; 1.90A {Escherichia coli} SCOP: c.87.1.2 PDB: 1nlm_A*
Probab=99.83 E-value=1.4e-18 Score=173.73 Aligned_cols=342 Identities=14% Similarity=0.111 Sum_probs=204.1
Q ss_pred cEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCCCCcc--chhhhhhhhhccCCCeEEEEeeCCCccCCCCCCCCcc
Q 010093 36 LHVFFFPFMAHGHMIPIVDMAKLFATRGVKASVITTPANAP--YVSKSVERANELGIEMDVKTIKFPSVEAGLPEGCENL 113 (518)
Q Consensus 36 ~kIl~~~~~~~GH~~p~l~LA~~L~~rGH~Vt~~~~~~~~~--~~~~~~~~~~~~g~~i~~~~ip~~~~~~~l~~~~~~~ 113 (518)
|||++++.+..||..++..||++|.++||+|++++...... .+.. .++.+..++... +... ..
T Consensus 7 mkIl~~~~~~gG~~~~~~~la~~L~~~G~~V~v~~~~~~~~~~~~~~---------~g~~~~~~~~~~----~~~~--~~ 71 (364)
T 1f0k_A 7 KRLMVMAGGTGGHVFPGLAVAHHLMAQGWQVRWLGTADRMEADLVPK---------HGIEIDFIRISG----LRGK--GI 71 (364)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHHHHTTTCEEEEEECTTSTHHHHGGG---------GTCEEEECCCCC----CTTC--CH
T ss_pred cEEEEEeCCCccchhHHHHHHHHHHHcCCEEEEEecCCcchhhhccc---------cCCceEEecCCc----cCcC--cc
Confidence 89999998877999999999999999999999999865321 1111 145666654321 1110 00
Q ss_pred ccccchhhhhhHHHHHHHHHhhHHHHHHHHhhCCCCEEEecCCCc--cHHHHHHHcCCCeEEEecchHHHHHHHhhhhhc
Q 010093 114 DAITNEVNKGLIVKFFGATMKLQEPLEQLLQEHKPDCLVADTFFP--WATDAAAKFGIPRLVFHGTSFFSLCASNCLALY 191 (518)
Q Consensus 114 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~~pDlVI~D~~~~--~~~~iA~~lgiP~v~~~~~~~~~~~~~~~~~~~ 191 (518)
. ..+...... ......+.+++++.+||+|+++.... .+..++..+|+|++......
T Consensus 72 -----~---~~~~~~~~~-~~~~~~l~~~l~~~~pDvv~~~~~~~~~~~~~~~~~~~~p~v~~~~~~------------- 129 (364)
T 1f0k_A 72 -----K---ALIAAPLRI-FNAWRQARAIMKAYKPDVVLGMGGYVSGPGGLAAWSLGIPVVLHEQNG------------- 129 (364)
T ss_dssp -----H---HHHTCHHHH-HHHHHHHHHHHHHHCCSEEEECSSTTHHHHHHHHHHTTCCEEEEECSS-------------
T ss_pred -----H---HHHHHHHHH-HHHHHHHHHHHHhcCCCEEEEeCCcCchHHHHHHHHcCCCEEEEecCC-------------
Confidence 0 110000000 11234566777888999999986432 45677888999998643210
Q ss_pred CCCCCCCCCCCccccCCCCCCccccCCCCCcccccCCCCchHHHHHHHhhhhcccccEEEEcCccccchHHHHHHHHhhC
Q 010093 192 EPHKKVSSDSEPFVMPHFPGEIKLTRNQLPDFVKQDMGDNDFSRLLKAIDDSDLRSYGVAVNSFYELEPAYADHYRKALG 271 (518)
Q Consensus 192 ~~~~~~~~~~~~~~~p~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ns~~~L~~~~~~~~~~~~~ 271 (518)
.++ . .... ..+..+.+++.+.. . +
T Consensus 130 --------------~~~--------------~---------~~~~------~~~~~d~v~~~~~~-~-----------~- 153 (364)
T 1f0k_A 130 --------------IAG--------------L---------TNKW------LAKIATKVMQAFPG-A-----------F- 153 (364)
T ss_dssp --------------SCC--------------H---------HHHH------HTTTCSEEEESSTT-S-----------S-
T ss_pred --------------CCc--------------H---------HHHH------HHHhCCEEEecChh-h-----------c-
Confidence 000 0 0000 01223444443211 1 2
Q ss_pred CcEEEeCccccCCcCchhhhhcCCCCCcChhHHhHhhhcCCCCcEEEEecCCcccCCHHHHHHHHHHHHhC--CCcEEEE
Q 010093 272 RRAWHIGPVSLCNRNFEDKALRGKQASIDELECLKWLNSKQPYSVVYVCFGSLANFTSAQLMEIATGLEAS--GRNFIWV 349 (518)
Q Consensus 272 ~~v~~vGpl~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~vIyvslGS~~~~~~~~~~~l~~al~~~--~~~~i~~ 349 (518)
+++..+|....... . . + +..-..+ ...+++++|++..|+.. ..+....++++++.+ +.++++.
T Consensus 154 ~~~~~i~n~v~~~~------~-~--~---~~~~~~~-~~~~~~~~il~~~g~~~--~~k~~~~li~a~~~l~~~~~~l~i 218 (364)
T 1f0k_A 154 PNAEVVGNPVRTDV------L-A--L---PLPQQRL-AGREGPVRVLVVGGSQG--ARILNQTMPQVAAKLGDSVTIWHQ 218 (364)
T ss_dssp SSCEECCCCCCHHH------H-T--S---CCHHHHH-TTCCSSEEEEEECTTTC--CHHHHHHHHHHHHHHGGGEEEEEE
T ss_pred CCceEeCCccchhh------c-c--c---chhhhhc-ccCCCCcEEEEEcCchH--hHHHHHHHHHHHHHhcCCcEEEEE
Confidence 24556663221100 0 0 0 0111122 22224557888888875 355556666777765 4566666
Q ss_pred EcCCCCCCCCCCCCCCChhHHHH---HhcCCCcEeecCcc-HHHhhccCCCcccccccCchhHHHHHHhCCceecCCcc-
Q 010093 350 VSKNKNDGGEGGNEDWLPEGFEK---RMEGKGLIIRGWAP-QVLILDHEAVGGFVTHCGWNSTLEAVAAGVPLVTWPVA- 424 (518)
Q Consensus 350 ~~~~~~~~~~~~~~~~lp~~~~~---~~~~~nv~~~~~~p-q~~lL~~~~~~~~ItHgG~~s~~eal~~GvP~l~~P~~- 424 (518)
++.+. . +.+.. +..-+|+.+.+|++ ...++..+++ +|+++|.+++.||+++|+|+|+.|..
T Consensus 219 ~G~~~-----------~-~~l~~~~~~~~~~~v~~~g~~~~~~~~~~~ad~--~v~~sg~~~~~EAma~G~Pvi~~~~~g 284 (364)
T 1f0k_A 219 SGKGS-----------Q-QSVEQAYAEAGQPQHKVTEFIDDMAAAYAWADV--VVCRSGALTVSEIAAAGLPALFVPFQH 284 (364)
T ss_dssp CCTTC-----------H-HHHHHHHHHTTCTTSEEESCCSCHHHHHHHCSE--EEECCCHHHHHHHHHHTCCEEECCCCC
T ss_pred cCCch-----------H-HHHHHHHhhcCCCceEEecchhhHHHHHHhCCE--EEECCchHHHHHHHHhCCCEEEeeCCC
Confidence 66543 1 22222 11225899999995 4789987555 99999999999999999999999987
Q ss_pred --cccchhHHHHHHhhhcceeeccccccccccCccChHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHhcCCCcHHH
Q 010093 425 --AEQFYNEKMVNEILKIGVGVGIQKWCRIVGDFVKRETIEKAVNEIMVGDRAEEMRSRAKALGKMAKRAVENGGSSYSD 502 (518)
Q Consensus 425 --~DQ~~na~~v~e~~G~G~~l~~~~~~~~~~~~~~~~~l~~av~~ll~~~~~~~~~~~a~~l~~~~~~~~~~~g~~~~~ 502 (518)
.||..|+..+. +.|.|..++.. ++++++|.++|.++ + . +.+++. ++..++. .+..+.+..
T Consensus 285 ~~~~q~~~~~~~~-~~g~g~~~~~~--------d~~~~~la~~i~~l-~---~-~~~~~~---~~~~~~~-~~~~~~~~~ 346 (364)
T 1f0k_A 285 KDRQQYWNALPLE-KAGAAKIIEQP--------QLSVDAVANTLAGW-S---R-ETLLTM---AERARAA-SIPDATERV 346 (364)
T ss_dssp TTCHHHHHHHHHH-HTTSEEECCGG--------GCCHHHHHHHHHTC-C---H-HHHHHH---HHHHHHT-CCTTHHHHH
T ss_pred CchhHHHHHHHHH-hCCcEEEeccc--------cCCHHHHHHHHHhc-C---H-HHHHHH---HHHHHHh-hccCHHHHH
Confidence 79999999994 89999988765 56799999999998 4 2 333333 3333322 234556666
Q ss_pred HHHHHHHHHhhhccC
Q 010093 503 LSALIEELRLSRHQS 517 (518)
Q Consensus 503 ~~~~~~~~~~~~~~~ 517 (518)
++.+.+...+.-|||
T Consensus 347 ~~~~~~~y~~~~~~~ 361 (364)
T 1f0k_A 347 ANEVSRVARALEHHH 361 (364)
T ss_dssp HHHHHHHHTTC----
T ss_pred HHHHHHHHHHHHhhc
Confidence 666666666666654
No 23
>3hbm_A UDP-sugar hydrolase; PSEG; 1.80A {Campylobacter jejuni subsp} PDB: 3hbn_A*
Probab=99.57 E-value=2.7e-13 Score=128.74 Aligned_cols=118 Identities=9% Similarity=0.016 Sum_probs=88.5
Q ss_pred CCcEEEEecCCcccCCHHHHHHHHHHHHhCCCcEEEEEcCCCCCCCCCCCCCCChhHHHHH-hcCCCcEeecCccH-HHh
Q 010093 313 PYSVVYVCFGSLANFTSAQLMEIATGLEASGRNFIWVVSKNKNDGGEGGNEDWLPEGFEKR-MEGKGLIIRGWAPQ-VLI 390 (518)
Q Consensus 313 ~~~vIyvslGS~~~~~~~~~~~l~~al~~~~~~~i~~~~~~~~~~~~~~~~~~lp~~~~~~-~~~~nv~~~~~~pq-~~l 390 (518)
+.+.|+|++|... .......+++++.... ++.++++.+. . ..+.+... ...+|+.+..|+++ .++
T Consensus 156 ~~~~ILv~~GG~d--~~~l~~~vl~~L~~~~-~i~vv~G~~~------~----~~~~l~~~~~~~~~v~v~~~~~~m~~~ 222 (282)
T 3hbm_A 156 KKYDFFICMGGTD--IKNLSLQIASELPKTK-IISIATSSSN------P----NLKKLQKFAKLHNNIRLFIDHENIAKL 222 (282)
T ss_dssp CCEEEEEECCSCC--TTCHHHHHHHHSCTTS-CEEEEECTTC------T----THHHHHHHHHTCSSEEEEESCSCHHHH
T ss_pred cCCeEEEEECCCc--hhhHHHHHHHHhhcCC-CEEEEECCCc------h----HHHHHHHHHhhCCCEEEEeCHHHHHHH
Confidence 3558999999754 2345566778876654 5666666544 1 22333322 12459999999986 569
Q ss_pred hccCCCcccccccCchhHHHHHHhCCceecCCcccccchhHHHHHHhhhcceeeccc
Q 010093 391 LDHEAVGGFVTHCGWNSTLEAVAAGVPLVTWPVAAEQFYNEKMVNEILKIGVGVGIQ 447 (518)
Q Consensus 391 L~~~~~~~~ItHgG~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~e~~G~G~~l~~~ 447 (518)
+..+++ +|++|| +|+.|+++.|+|++.+|...+|..||..+ ++.|+|..+..-
T Consensus 223 m~~aDl--vI~~gG-~T~~E~~~~g~P~i~ip~~~~Q~~nA~~l-~~~G~~~~~~~~ 275 (282)
T 3hbm_A 223 MNESNK--LIISAS-SLVNEALLLKANFKAICYVKNQESTATWL-AKKGYEVEYKYL 275 (282)
T ss_dssp HHTEEE--EEEESS-HHHHHHHHTTCCEEEECCSGGGHHHHHHH-HHTTCEEECGGG
T ss_pred HHHCCE--EEECCc-HHHHHHHHcCCCEEEEeCCCCHHHHHHHH-HHCCCEEEcchh
Confidence 977555 999999 89999999999999999999999999999 599999998654
No 24
>2jzc_A UDP-N-acetylglucosamine transferase subunit ALG13; rossmann-like fold, endoplasmic reticulum, glycosyltransferase, structural genomics; NMR {Saccharomyces cerevisiae} PDB: 2ks6_A
Probab=99.52 E-value=2.2e-14 Score=130.66 Aligned_cols=132 Identities=14% Similarity=0.096 Sum_probs=93.1
Q ss_pred CCCcEEEEecCCcccCCHHHHHHH-----HHHHHhCC-CcEEEEEcCCCCCCCCCCCCCCChhHHH-HH---------h-
Q 010093 312 QPYSVVYVCFGSLANFTSAQLMEI-----ATGLEASG-RNFIWVVSKNKNDGGEGGNEDWLPEGFE-KR---------M- 374 (518)
Q Consensus 312 ~~~~vIyvslGS~~~~~~~~~~~l-----~~al~~~~-~~~i~~~~~~~~~~~~~~~~~~lp~~~~-~~---------~- 374 (518)
+++++|||+.||...+ .+.+..+ ++++...+ .++++++|... . + .++... .. +
T Consensus 26 ~~~~~VlVtgGS~~~~-n~li~~vl~~~~l~~L~~~~~~~vv~q~G~~~----~-~----~~~~~~~~~~~~~~~~l~p~ 95 (224)
T 2jzc_A 26 IEEKALFVTCGATVPF-PKLVSCVLSDEFCQELIQYGFVRLIIQFGRNY----S-S----EFEHLVQERGGQRESQKIPI 95 (224)
T ss_dssp CCSCCEEEECCSCCSC-HHHHHHHTSHHHHHHHHTTTCCCEEECCCSSS----C-C----CCCSHHHHHTCEECSCCCSS
T ss_pred CCCCEEEEEcCCchHH-HHHHHHHHHHHHHHHHhcCCCeEEEEEECCCc----h-h----hHHHHHHhhhcccccccccc
Confidence 3567999999997422 3333333 48888877 79999998765 1 0 001000 00 0
Q ss_pred ----------------cCCCcEeecCccH-HHhhc-cCCCcccccccCchhHHHHHHhCCceecCCcc----cccchhHH
Q 010093 375 ----------------EGKGLIIRGWAPQ-VLILD-HEAVGGFVTHCGWNSTLEAVAAGVPLVTWPVA----AEQFYNEK 432 (518)
Q Consensus 375 ----------------~~~nv~~~~~~pq-~~lL~-~~~~~~~ItHgG~~s~~eal~~GvP~l~~P~~----~DQ~~na~ 432 (518)
..-++.+.+|+++ .++|+ .+++ +|||||.||++|++++|+|+|++|.. .||..||+
T Consensus 96 ~~~~~~~~~~~~~~~~~~~~v~v~~f~~~m~~~l~~~Adl--vIshaGagTv~Eal~~G~P~IvVP~~~~~~~HQ~~nA~ 173 (224)
T 2jzc_A 96 DQFGCGDTARQYVLMNGKLKVIGFDFSTKMQSIIRDYSDL--VISHAGTGSILDSLRLNKPLIVCVNDSLMDNHQQQIAD 173 (224)
T ss_dssp CTTCTTCSCEEEESTTTSSEEEECCSSSSHHHHHHHHCSC--EEESSCHHHHHHHHHTTCCCCEECCSSCCCCHHHHHHH
T ss_pred ccccccccccccccccCCceEEEeeccchHHHHHHhcCCE--EEECCcHHHHHHHHHhCCCEEEEcCcccccchHHHHHH
Confidence 0124557788876 47897 7555 99999999999999999999999973 36999999
Q ss_pred HHHHhhhcceeeccccccccccCccChHHHHHHHHHH
Q 010093 433 MVNEILKIGVGVGIQKWCRIVGDFVKRETIEKAVNEI 469 (518)
Q Consensus 433 ~v~e~~G~G~~l~~~~~~~~~~~~~~~~~l~~av~~l 469 (518)
++ ++.|+|+.+ +++.|.++|.++
T Consensus 174 ~l-~~~G~~~~~-------------~~~~L~~~i~~l 196 (224)
T 2jzc_A 174 KF-VELGYVWSC-------------APTETGLIAGLR 196 (224)
T ss_dssp HH-HHHSCCCEE-------------CSCTTTHHHHHH
T ss_pred HH-HHCCCEEEc-------------CHHHHHHHHHHH
Confidence 99 599998654 345677777776
No 25
>2gek_A Phosphatidylinositol mannosyltransferase (PIMA); GT4 glycosyltransferase, rossmann fold, complex; HET: GDP; 2.40A {Mycobacterium smegmatis} PDB: 2gej_A*
Probab=99.38 E-value=3e-10 Score=114.50 Aligned_cols=340 Identities=12% Similarity=0.055 Sum_probs=180.3
Q ss_pred CCcEEEEEcCC---C-ccChHHHHHHHHHHHhCCCeEEEEeCCCCccchhhhhhhhhccCCCeEEEEeeCCCccCCCCCC
Q 010093 34 PQLHVFFFPFM---A-HGHMIPIVDMAKLFATRGVKASVITTPANAPYVSKSVERANELGIEMDVKTIKFPSVEAGLPEG 109 (518)
Q Consensus 34 ~~~kIl~~~~~---~-~GH~~p~l~LA~~L~~rGH~Vt~~~~~~~~~~~~~~~~~~~~~g~~i~~~~ip~~~~~~~l~~~ 109 (518)
+||||+|+... . .|.-..+..+++.|.++||+|++++............. ..+ .+..++..
T Consensus 19 ~~MkIl~i~~~~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~~~~~---~~~---~~~~~~~~--------- 83 (406)
T 2gek_A 19 SHMRIGMVCPYSFDVPGGVQSHVLQLAEVLRDAGHEVSVLAPASPHVKLPDYVV---SGG---KAVPIPYN--------- 83 (406)
T ss_dssp --CEEEEECSSCTTSCCHHHHHHHHHHHHHHHTTCEEEEEESCCTTSCCCTTEE---ECC---CCC--------------
T ss_pred CcceEEEEeccCCCCCCcHHHHHHHHHHHHHHCCCeEEEEecCCccccCCcccc---cCC---cEEecccc---------
Confidence 58999988732 2 56668899999999999999999998754321111100 000 11111100
Q ss_pred CCccccccchhhhhhHHHHHHHHHhhHHHHHHHHhhCCCCEEEecCCCc--cHHHHHHHcCCCeEEEecchHHHHHHHhh
Q 010093 110 CENLDAITNEVNKGLIVKFFGATMKLQEPLEQLLQEHKPDCLVADTFFP--WATDAAAKFGIPRLVFHGTSFFSLCASNC 187 (518)
Q Consensus 110 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~~pDlVI~D~~~~--~~~~iA~~lgiP~v~~~~~~~~~~~~~~~ 187 (518)
. ...... .. ......+.+++++.+||+|++..... .+..++...++|+|.......
T Consensus 84 ~-~~~~~~-----~~--------~~~~~~l~~~l~~~~~Dii~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~-------- 141 (406)
T 2gek_A 84 G-SVARLR-----FG--------PATHRKVKKWIAEGDFDVLHIHEPNAPSLSMLALQAAEGPIVATFHTST-------- 141 (406)
T ss_dssp -------------CC--------HHHHHHHHHHHHHHCCSEEEEECCCSSSHHHHHHHHEESSEEEEECCCC--------
T ss_pred C-Cccccc-----cc--------HHHHHHHHHHHHhcCCCEEEECCccchHHHHHHHHhcCCCEEEEEcCcc--------
Confidence 0 000000 00 01224566677778999999876444 356677778999987544310
Q ss_pred hhhcCCCCCCCCCCCccccCCCCCCccccCCCCCcccccCCCCchHHHHHHHhhhhcccccEEEEcCccccchHHHHHHH
Q 010093 188 LALYEPHKKVSSDSEPFVMPHFPGEIKLTRNQLPDFVKQDMGDNDFSRLLKAIDDSDLRSYGVAVNSFYELEPAYADHYR 267 (518)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ns~~~L~~~~~~~~~ 267 (518)
+.. .+ ...+...+......++.++..+... ...+.
T Consensus 142 ----------------------~~~---------~~---------~~~~~~~~~~~~~~~d~ii~~s~~~-----~~~~~ 176 (406)
T 2gek_A 142 ----------------------TKS---------LT---------LSVFQGILRPYHEKIIGRIAVSDLA-----RRWQM 176 (406)
T ss_dssp ----------------------CSH---------HH---------HHHHHSTTHHHHTTCSEEEESSHHH-----HHHHH
T ss_pred ----------------------hhh---------hh---------HHHHHHHHHHHHhhCCEEEECCHHH-----HHHHH
Confidence 000 00 0000000112234566666655321 12222
Q ss_pred HhhC-CcEEEeCccccCCcCchhhhhcCCCCCcChhHHhHhh--hcCCCCcEEEEecCCc-ccCCHHHHHHHHHHHHhC-
Q 010093 268 KALG-RRAWHIGPVSLCNRNFEDKALRGKQASIDELECLKWL--NSKQPYSVVYVCFGSL-ANFTSAQLMEIATGLEAS- 342 (518)
Q Consensus 268 ~~~~-~~v~~vGpl~~~~~~~~~~~~~~~~~~~~~~~l~~~l--~~~~~~~vIyvslGS~-~~~~~~~~~~l~~al~~~- 342 (518)
..++ .++ .|..-... +....-- ...++...+++..|+. .. .+.+..+++++..+
T Consensus 177 ~~~~~~~~-vi~~~v~~------------------~~~~~~~~~~~~~~~~~~i~~~G~~~~~--~Kg~~~li~a~~~l~ 235 (406)
T 2gek_A 177 EALGSDAV-EIPNGVDV------------------ASFADAPLLDGYPREGRTVLFLGRYDEP--RKGMAVLLAALPKLV 235 (406)
T ss_dssp HHHSSCEE-ECCCCBCH------------------HHHHTCCCCTTCSCSSCEEEEESCTTSG--GGCHHHHHHHHHHHH
T ss_pred HhcCCCcE-EecCCCCh------------------hhcCCCchhhhccCCCeEEEEEeeeCcc--ccCHHHHHHHHHHHH
Confidence 2333 333 44422110 0000000 0000012466777876 42 44455566666654
Q ss_pred ----CCcEEEEEcCCCCCCCCCCCCCCChhHHHHHhc--CCCcEeecCccH---HHhhccCCCccccc----ccCc-hhH
Q 010093 343 ----GRNFIWVVSKNKNDGGEGGNEDWLPEGFEKRME--GKGLIIRGWAPQ---VLILDHEAVGGFVT----HCGW-NST 408 (518)
Q Consensus 343 ----~~~~i~~~~~~~~~~~~~~~~~~lp~~~~~~~~--~~nv~~~~~~pq---~~lL~~~~~~~~It----HgG~-~s~ 408 (518)
+.++ ..+|.+. . +.+..... .+|+.+.+++|+ ..++..+++ +|. +.|+ +++
T Consensus 236 ~~~~~~~l-~i~G~~~-----------~-~~l~~~~~~~~~~v~~~g~~~~~~~~~~~~~adv--~v~ps~~~e~~~~~~ 300 (406)
T 2gek_A 236 ARFPDVEI-LIVGRGD-----------E-DELREQAGDLAGHLRFLGQVDDATKASAMRSADV--YCAPHLGGESFGIVL 300 (406)
T ss_dssp TTSTTCEE-EEESCSC-----------H-HHHHHHTGGGGGGEEECCSCCHHHHHHHHHHSSE--EEECCCSCCSSCHHH
T ss_pred HHCCCeEE-EEEcCCc-----------H-HHHHHHHHhccCcEEEEecCCHHHHHHHHHHCCE--EEecCCCCCCCchHH
Confidence 3343 3344433 2 23332221 578999999997 468877666 552 3444 589
Q ss_pred HHHHHhCCceecCCcccccchhHHHHHHhhhcceeeccccccccccCccChHHHHHHHHHHhcCChHHHHHHHHHHHHHH
Q 010093 409 LEAVAAGVPLVTWPVAAEQFYNEKMVNEILKIGVGVGIQKWCRIVGDFVKRETIEKAVNEIMVGDRAEEMRSRAKALGKM 488 (518)
Q Consensus 409 ~eal~~GvP~l~~P~~~DQ~~na~~v~e~~G~G~~l~~~~~~~~~~~~~~~~~l~~av~~ll~~~~~~~~~~~a~~l~~~ 488 (518)
.||+++|+|+|+.+. ......+ +..+.|..++. .+.+++.++|.++++ ++..+++ +++.
T Consensus 301 ~Ea~a~G~PvI~~~~----~~~~e~i-~~~~~g~~~~~----------~d~~~l~~~i~~l~~---~~~~~~~---~~~~ 359 (406)
T 2gek_A 301 VEAMAAGTAVVASDL----DAFRRVL-ADGDAGRLVPV----------DDADGMAAALIGILE---DDQLRAG---YVAR 359 (406)
T ss_dssp HHHHHHTCEEEECCC----HHHHHHH-TTTTSSEECCT----------TCHHHHHHHHHHHHH---CHHHHHH---HHHH
T ss_pred HHHHHcCCCEEEecC----CcHHHHh-cCCCceEEeCC----------CCHHHHHHHHHHHHc---CHHHHHH---HHHH
Confidence 999999999999765 4455556 45567877754 488999999999997 5454433 3333
Q ss_pred HHHHHhcCCCcHHHHHHHHHHHHhh
Q 010093 489 AKRAVENGGSSYSDLSALIEELRLS 513 (518)
Q Consensus 489 ~~~~~~~~g~~~~~~~~~~~~~~~~ 513 (518)
.++.++ ..+.....+.+.+.++..
T Consensus 360 ~~~~~~-~~s~~~~~~~~~~~~~~~ 383 (406)
T 2gek_A 360 ASERVH-RYDWSVVSAQIMRVYETV 383 (406)
T ss_dssp HHHHGG-GGBHHHHHHHHHHHHHHH
T ss_pred HHHHHH-hCCHHHHHHHHHHHHHHH
Confidence 343334 556666666666655543
No 26
>3okp_A GDP-mannose-dependent alpha-(1-6)-phosphatidylino monomannoside mannosyltransferase...; GT-B fold, alpha-mannosyltransferase; HET: GDD; 2.00A {Corynebacterium glutamicum} PDB: 3okc_A* 3oka_A*
Probab=99.36 E-value=4.4e-10 Score=112.74 Aligned_cols=349 Identities=13% Similarity=0.066 Sum_probs=191.8
Q ss_pred CCcEEEEEcC--C--CccChHHHHHHHHHHHhCCCeEEEEeCCCCccchhhhhhhhhccCCCeEEEEeeCCCccCCCCCC
Q 010093 34 PQLHVFFFPF--M--AHGHMIPIVDMAKLFATRGVKASVITTPANAPYVSKSVERANELGIEMDVKTIKFPSVEAGLPEG 109 (518)
Q Consensus 34 ~~~kIl~~~~--~--~~GH~~p~l~LA~~L~~rGH~Vt~~~~~~~~~~~~~~~~~~~~~g~~i~~~~ip~~~~~~~l~~~ 109 (518)
+||||+++.. + ..|.-..+..+++.| +||+|++++............ ...++.+..++... .
T Consensus 3 ~~mkIl~v~~~~~p~~gG~~~~~~~l~~~L--~g~~v~v~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~-------~ 68 (394)
T 3okp_A 3 ASRKTLVVTNDFPPRIGGIQSYLRDFIATQ--DPESIVVFASTQNAEEAHAYD-----KTLDYEVIRWPRSV-------M 68 (394)
T ss_dssp -CCCEEEEESCCTTSCSHHHHHHHHHHTTS--CGGGEEEEEECSSHHHHHHHH-----TTCSSEEEEESSSS-------C
T ss_pred CCceEEEEeCccCCccchHHHHHHHHHHHh--cCCeEEEEECCCCccchhhhc-----cccceEEEEccccc-------c
Confidence 5789998864 3 467788899999999 799999999876543211110 12356666654210 0
Q ss_pred CCccccccchhhhhhHHHHHHHHHhhHHHHHHHHhhCCCCEEEecCCCc--cHHHHHHHcCCCeEE-EecchHHHHHHHh
Q 010093 110 CENLDAITNEVNKGLIVKFFGATMKLQEPLEQLLQEHKPDCLVADTFFP--WATDAAAKFGIPRLV-FHGTSFFSLCASN 186 (518)
Q Consensus 110 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~~pDlVI~D~~~~--~~~~iA~~lgiP~v~-~~~~~~~~~~~~~ 186 (518)
. ... .....+.+++++.+||+|++..... ....++..+++|.++ .........
T Consensus 69 ---~---------~~~--------~~~~~l~~~~~~~~~Dvv~~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~~---- 124 (394)
T 3okp_A 69 ---L---------PTP--------TTAHAMAEIIREREIDNVWFGAAAPLALMAGTAKQAGASKVIASTHGHEVGW---- 124 (394)
T ss_dssp ---C---------SCH--------HHHHHHHHHHHHTTCSEEEESSCTTGGGGHHHHHHTTCSEEEEECCSTHHHH----
T ss_pred ---c---------cch--------hhHHHHHHHHHhcCCCEEEECCcchHHHHHHHHHhcCCCcEEEEeccchhhh----
Confidence 0 000 1233566778888999999865443 456678889998444 333211100
Q ss_pred hhhhcCCCCCCCCCCCccccCCCCCCccccCCCCCcccccCCCCchHHHHHHHhhhhcccccEEEEcCccccchHHHHHH
Q 010093 187 CLALYEPHKKVSSDSEPFVMPHFPGEIKLTRNQLPDFVKQDMGDNDFSRLLKAIDDSDLRSYGVAVNSFYELEPAYADHY 266 (518)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ns~~~L~~~~~~~~ 266 (518)
. .......... ...+.++.++..+... ...+
T Consensus 125 -----------------------------~------------~~~~~~~~~~---~~~~~~d~ii~~s~~~-----~~~~ 155 (394)
T 3okp_A 125 -----------------------------S------------MLPGSRQSLR---KIGTEVDVLTYISQYT-----LRRF 155 (394)
T ss_dssp -----------------------------T------------TSHHHHHHHH---HHHHHCSEEEESCHHH-----HHHH
T ss_pred -----------------------------h------------hcchhhHHHH---HHHHhCCEEEEcCHHH-----HHHH
Confidence 0 0000111111 1224566666655322 2223
Q ss_pred HHhh--CCcEEEeCccccCCcCchhhhhcCCCCCcChhHHhHhhhcCCCCcEEEEecCCcccCCHHHHHHHHHHHHhC--
Q 010093 267 RKAL--GRRAWHIGPVSLCNRNFEDKALRGKQASIDELECLKWLNSKQPYSVVYVCFGSLANFTSAQLMEIATGLEAS-- 342 (518)
Q Consensus 267 ~~~~--~~~v~~vGpl~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~vIyvslGS~~~~~~~~~~~l~~al~~~-- 342 (518)
...+ ..++..|..-..... ... ........+.+-+.-. ++..+++..|++. ..+.+..++++++.+
T Consensus 156 ~~~~~~~~~~~vi~ngv~~~~-~~~------~~~~~~~~~~~~~~~~-~~~~~i~~~G~~~--~~Kg~~~li~a~~~l~~ 225 (394)
T 3okp_A 156 KSAFGSHPTFEHLPSGVDVKR-FTP------ATPEDKSATRKKLGFT-DTTPVIACNSRLV--PRKGQDSLIKAMPQVIA 225 (394)
T ss_dssp HHHHCSSSEEEECCCCBCTTT-SCC------CCHHHHHHHHHHTTCC-TTCCEEEEESCSC--GGGCHHHHHHHHHHHHH
T ss_pred HHhcCCCCCeEEecCCcCHHH-cCC------CCchhhHHHHHhcCCC-cCceEEEEEeccc--cccCHHHHHHHHHHHHh
Confidence 3322 246666663222111 000 0000012233333222 2335667778864 344455566666543
Q ss_pred ---CCcEEEEEcCCCCCCCCCCCCCCChhHHHHH--hcCCCcEeecCccHHH---hhccCCCccccc-----------cc
Q 010093 343 ---GRNFIWVVSKNKNDGGEGGNEDWLPEGFEKR--MEGKGLIIRGWAPQVL---ILDHEAVGGFVT-----------HC 403 (518)
Q Consensus 343 ---~~~~i~~~~~~~~~~~~~~~~~~lp~~~~~~--~~~~nv~~~~~~pq~~---lL~~~~~~~~It-----------Hg 403 (518)
+.++++. |.+. ..+.+... ...+|+.+.+|+|+.+ ++..+++ +|. -|
T Consensus 226 ~~~~~~l~i~-G~g~-----------~~~~l~~~~~~~~~~v~~~g~~~~~~~~~~~~~ad~--~v~ps~~~~~~~~~e~ 291 (394)
T 3okp_A 226 ARPDAQLLIV-GSGR-----------YESTLRRLATDVSQNVKFLGRLEYQDMINTLAAADI--FAMPARTRGGGLDVEG 291 (394)
T ss_dssp HSTTCEEEEE-CCCT-----------THHHHHHHTGGGGGGEEEEESCCHHHHHHHHHHCSE--EEECCCCBGGGTBCCS
T ss_pred hCCCeEEEEE-cCch-----------HHHHHHHHHhcccCeEEEcCCCCHHHHHHHHHhCCE--EEecCccccccccccc
Confidence 4455544 4332 22223222 1246999999998654 6766665 665 55
Q ss_pred CchhHHHHHHhCCceecCCcccccchhHHHHHHhhhcceeeccccccccccCccChHHHHHHHHHHhcCChHHHHHHHHH
Q 010093 404 GWNSTLEAVAAGVPLVTWPVAAEQFYNEKMVNEILKIGVGVGIQKWCRIVGDFVKRETIEKAVNEIMVGDRAEEMRSRAK 483 (518)
Q Consensus 404 G~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~e~~G~G~~l~~~~~~~~~~~~~~~~~l~~av~~ll~~~~~~~~~~~a~ 483 (518)
..+++.||+++|+|+|+.+.. .....+ ..|.|..+.. .+.+++.++|.++++ ++..+++
T Consensus 292 ~~~~~~Ea~a~G~PvI~~~~~----~~~e~i--~~~~g~~~~~----------~d~~~l~~~i~~l~~---~~~~~~~-- 350 (394)
T 3okp_A 292 LGIVYLEAQACGVPVIAGTSG----GAPETV--TPATGLVVEG----------SDVDKLSELLIELLD---DPIRRAA-- 350 (394)
T ss_dssp SCHHHHHHHHTTCCEEECSST----TGGGGC--CTTTEEECCT----------TCHHHHHHHHHHHHT---CHHHHHH--
T ss_pred cCcHHHHHHHcCCCEEEeCCC----ChHHHH--hcCCceEeCC----------CCHHHHHHHHHHHHh---CHHHHHH--
Confidence 567999999999999997653 333334 2346777754 489999999999997 4443332
Q ss_pred HHHHHHHHHHhcCCCcHHHHHHHHHHHHhhhc
Q 010093 484 ALGKMAKRAVENGGSSYSDLSALIEELRLSRH 515 (518)
Q Consensus 484 ~l~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 515 (518)
+++..++.+.+..+.....+.+.+.++++..
T Consensus 351 -~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~r 381 (394)
T 3okp_A 351 -MGAAGRAHVEAEWSWEIMGERLTNILQSEPR 381 (394)
T ss_dssp -HHHHHHHHHHHHTBHHHHHHHHHHHHHSCCC
T ss_pred -HHHHHHHHHHHhCCHHHHHHHHHHHHHHhcc
Confidence 3333333334456677777777777775543
No 27
>3c48_A Predicted glycosyltransferases; retaining glycosyltransferase, beta alpha beta, substrate AS catalysis; 2.10A {Corynebacterium glutamicum} PDB: 3c4v_A* 3c4q_A*
Probab=99.35 E-value=1.6e-09 Score=110.45 Aligned_cols=340 Identities=13% Similarity=0.075 Sum_probs=168.7
Q ss_pred CCCcEEEEEcC-----------CCccChHHHHHHHHHHHhCCCeEEEEeCCCCccchhhhhhhhhccCCCeEEEEeeCCC
Q 010093 33 IPQLHVFFFPF-----------MAHGHMIPIVDMAKLFATRGVKASVITTPANAPYVSKSVERANELGIEMDVKTIKFPS 101 (518)
Q Consensus 33 ~~~~kIl~~~~-----------~~~GH~~p~l~LA~~L~~rGH~Vt~~~~~~~~~~~~~~~~~~~~~g~~i~~~~ip~~~ 101 (518)
.+||||+|+.. ...|+-..+..|++.|.++||+|++++........... ....++.+..++...
T Consensus 18 ~~mmkIl~i~~~~~p~~~~~~~~~GG~~~~~~~la~~L~~~G~~V~v~~~~~~~~~~~~~-----~~~~~v~v~~~~~~~ 92 (438)
T 3c48_A 18 GSHMRVAMISMHTSPLQQPGTGDSGGMNVYILSTATELAKQGIEVDIYTRATRPSQGEIV-----RVAENLRVINIAAGP 92 (438)
T ss_dssp -CCCEEEEECTTSCTTCC-------CHHHHHHHHHHHHHHTTCEEEEEEECCCGGGCSEE-----EEETTEEEEEECCSC
T ss_pred cchheeeeEEeeccccccCCCCCCCCHHHHHHHHHHHHHhcCCEEEEEecCCCCCCcccc-----cccCCeEEEEecCCC
Confidence 36899999984 23578888999999999999999999876432110000 001246666665321
Q ss_pred ccCCCCCCCCccccccchhhhhhHHHHHHHHHhhHHHHHHH-HhhC-CCCEEEecCCCc--cHHHHHHHcCCCeEEEecc
Q 010093 102 VEAGLPEGCENLDAITNEVNKGLIVKFFGATMKLQEPLEQL-LQEH-KPDCLVADTFFP--WATDAAAKFGIPRLVFHGT 177 (518)
Q Consensus 102 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l-l~~~-~pDlVI~D~~~~--~~~~iA~~lgiP~v~~~~~ 177 (518)
. ... ...... ..+..+ ...+.+. ++.. +||+|++..... .+..++..+++|+|.....
T Consensus 93 ~-----~~~-~~~~~~-----~~~~~~-------~~~~~~~~~~~~~~~Div~~~~~~~~~~~~~~~~~~~~p~v~~~h~ 154 (438)
T 3c48_A 93 Y-----EGL-SKEELP-----TQLAAF-------TGGMLSFTRREKVTYDLIHSHYWLSGQVGWLLRDLWRIPLIHTAHT 154 (438)
T ss_dssp S-----SSC-CGGGGG-----GGHHHH-------HHHHHHHHHHHTCCCSEEEEEHHHHHHHHHHHHHHHTCCEEEECSS
T ss_pred c-----ccc-chhHHH-----HHHHHH-------HHHHHHHHHhccCCCCEEEeCCccHHHHHHHHHHHcCCCEEEEecC
Confidence 0 000 000000 111111 1122222 4433 499999875332 3455778889999876554
Q ss_pred hHHHHHHHhhhhhcCCCCCCCCCCCccccCCCCCCccccCCCCCcccccCCCCchHHHHHHHhhhhcccccEEEEcCccc
Q 010093 178 SFFSLCASNCLALYEPHKKVSSDSEPFVMPHFPGEIKLTRNQLPDFVKQDMGDNDFSRLLKAIDDSDLRSYGVAVNSFYE 257 (518)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ns~~~ 257 (518)
...... ..+.. ...... ....... ......++.+++.+-..
T Consensus 155 ~~~~~~-----------------------~~~~~------~~~~~~--------~~~~~~~--~~~~~~~d~ii~~s~~~ 195 (438)
T 3c48_A 155 LAAVKN-----------------------SYRDD------SDTPES--------EARRICE--QQLVDNADVLAVNTQEE 195 (438)
T ss_dssp CHHHHS-----------------------CC----------CCHHH--------HHHHHHH--HHHHHHCSEEEESSHHH
T ss_pred Cccccc-----------------------ccccc------cCCcch--------HHHHHHH--HHHHhcCCEEEEcCHHH
Confidence 321110 00000 000000 0111111 12234567777766332
Q ss_pred cchHHHHHHHHhhC---CcEEEeCccccCCcCchhhhhcCCCCCcChhHHhHhhhcCCCCcEEEEecCCcccCCHHHHHH
Q 010093 258 LEPAYADHYRKALG---RRAWHIGPVSLCNRNFEDKALRGKQASIDELECLKWLNSKQPYSVVYVCFGSLANFTSAQLME 334 (518)
Q Consensus 258 L~~~~~~~~~~~~~---~~v~~vGpl~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~vIyvslGS~~~~~~~~~~~ 334 (518)
. ..+...++ .++..|+.-..... ... ........+..-+.-. +...+++..|++.. .+.+..
T Consensus 196 ~-----~~~~~~~g~~~~k~~vi~ngvd~~~-~~~------~~~~~~~~~r~~~~~~-~~~~~i~~~G~~~~--~Kg~~~ 260 (438)
T 3c48_A 196 M-----QDLMHHYDADPDRISVVSPGADVEL-YSP------GNDRATERSRRELGIP-LHTKVVAFVGRLQP--FKGPQV 260 (438)
T ss_dssp H-----HHHHHHHCCCGGGEEECCCCCCTTT-SCC------C----CHHHHHHTTCC-SSSEEEEEESCBSG--GGCHHH
T ss_pred H-----HHHHHHhCCChhheEEecCCccccc-cCC------cccchhhhhHHhcCCC-CCCcEEEEEeeecc--cCCHHH
Confidence 2 22222221 35666663322110 000 0000001133323222 22356677788653 344555
Q ss_pred HHHHHHhC-------CCcEEEEEcCCCCCCCCCCCCCCChhHHHHH-hcCCCcEeecCccH---HHhhccCCCcccccc-
Q 010093 335 IATGLEAS-------GRNFIWVVSKNKNDGGEGGNEDWLPEGFEKR-MEGKGLIIRGWAPQ---VLILDHEAVGGFVTH- 402 (518)
Q Consensus 335 l~~al~~~-------~~~~i~~~~~~~~~~~~~~~~~~lp~~~~~~-~~~~nv~~~~~~pq---~~lL~~~~~~~~ItH- 402 (518)
+++++..+ +.++ +.++... ..+...+.+- .+..+ ...+|+.+.+|+|+ ..++..+++ +|.-
T Consensus 261 li~a~~~l~~~~p~~~~~l-~i~G~~~---~~g~~~~~l~-~~~~~~~l~~~v~~~g~~~~~~~~~~~~~adv--~v~ps 333 (438)
T 3c48_A 261 LIKAVAALFDRDPDRNLRV-IICGGPS---GPNATPDTYR-HMAEELGVEKRIRFLDPRPPSELVAVYRAADI--VAVPS 333 (438)
T ss_dssp HHHHHHHHHHHCTTCSEEE-EEECCBC---------CHHH-HHHHHTTCTTTEEEECCCCHHHHHHHHHHCSE--EEECC
T ss_pred HHHHHHHHHhhCCCcceEE-EEEeCCC---CCCcHHHHHH-HHHHHcCCCCcEEEcCCCChHHHHHHHHhCCE--EEECc
Confidence 55555543 2233 3334311 0001111111 11111 12568999999986 457777666 5543
Q ss_pred ---cCchhHHHHHHhCCceecCCcccccchhHHHHHHhhhcceeeccccccccccCccChHHHHHHHHHHhc
Q 010093 403 ---CGWNSTLEAVAAGVPLVTWPVAAEQFYNEKMVNEILKIGVGVGIQKWCRIVGDFVKRETIEKAVNEIMV 471 (518)
Q Consensus 403 ---gG~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~e~~G~G~~l~~~~~~~~~~~~~~~~~l~~av~~ll~ 471 (518)
|..+++.||+++|+|+|+.+. ......+ +..+.|..++. .+.+++.++|.++++
T Consensus 334 ~~e~~~~~~~Eama~G~PvI~~~~----~~~~e~i-~~~~~g~~~~~----------~d~~~la~~i~~l~~ 390 (438)
T 3c48_A 334 FNESFGLVAMEAQASGTPVIAARV----GGLPIAV-AEGETGLLVDG----------HSPHAWADALATLLD 390 (438)
T ss_dssp SCCSSCHHHHHHHHTTCCEEEESC----TTHHHHS-CBTTTEEEESS----------CCHHHHHHHHHHHHH
T ss_pred cccCCchHHHHHHHcCCCEEecCC----CChhHHh-hCCCcEEECCC----------CCHHHHHHHHHHHHc
Confidence 335689999999999998653 3445555 45557777754 488999999999997
No 28
>1v4v_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, two domains, homodimer, riken structural genomics/proteomics initiative, RSGI; HET: MSE; 1.80A {Thermus thermophilus} SCOP: c.87.1.3
Probab=99.33 E-value=9.3e-11 Score=117.22 Aligned_cols=134 Identities=20% Similarity=0.181 Sum_probs=85.0
Q ss_pred CcEEEEecCCcccCCHHHHHHHHHHHHhC-----CCcEEEEEcCCCCCCCCCCCCCCChhHHHHHh-cCCCcEeecCccH
Q 010093 314 YSVVYVCFGSLANFTSAQLMEIATGLEAS-----GRNFIWVVSKNKNDGGEGGNEDWLPEGFEKRM-EGKGLIIRGWAPQ 387 (518)
Q Consensus 314 ~~vIyvslGS~~~~~~~~~~~l~~al~~~-----~~~~i~~~~~~~~~~~~~~~~~~lp~~~~~~~-~~~nv~~~~~~pq 387 (518)
+++|+++.|..... +.+..++++++.+ +.++++..+.+. . +-+.+.... ..+++++.+++++
T Consensus 198 ~~~vl~~~gr~~~~--k~~~~ll~a~~~l~~~~~~~~lv~~~g~~~------~----~~~~l~~~~~~~~~v~~~g~~g~ 265 (376)
T 1v4v_A 198 GPYVTVTMHRRENW--PLLSDLAQALKRVAEAFPHLTFVYPVHLNP------V----VREAVFPVLKGVRNFVLLDPLEY 265 (376)
T ss_dssp SCEEEECCCCGGGG--GGHHHHHHHHHHHHHHCTTSEEEEECCSCH------H----HHHHHHHHHTTCTTEEEECCCCH
T ss_pred CCEEEEEeCcccch--HHHHHHHHHHHHHHhhCCCeEEEEECCCCH------H----HHHHHHHHhccCCCEEEECCCCH
Confidence 45777777765322 2456677777643 345555444321 0 112222221 2358999866654
Q ss_pred ---HHhhccCCCcccccccCchhHHHHHHhCCceecCCcccccchhHHHHHHhhhcceeeccccccccccCccChHHHHH
Q 010093 388 ---VLILDHEAVGGFVTHCGWNSTLEAVAAGVPLVTWPVAAEQFYNEKMVNEILKIGVGVGIQKWCRIVGDFVKRETIEK 464 (518)
Q Consensus 388 ---~~lL~~~~~~~~ItHgG~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~e~~G~G~~l~~~~~~~~~~~~~~~~~l~~ 464 (518)
.++++.+++ ||+.+| |.+.||+++|+|+|+.+..+++.. ++ +.|.|+.+. .++++|.+
T Consensus 266 ~~~~~~~~~ad~--~v~~S~-g~~lEA~a~G~PvI~~~~~~~~~~----~~-~~g~g~lv~-----------~d~~~la~ 326 (376)
T 1v4v_A 266 GSMAALMRASLL--LVTDSG-GLQEEGAALGVPVVVLRNVTERPE----GL-KAGILKLAG-----------TDPEGVYR 326 (376)
T ss_dssp HHHHHHHHTEEE--EEESCH-HHHHHHHHTTCCEEECSSSCSCHH----HH-HHTSEEECC-----------SCHHHHHH
T ss_pred HHHHHHHHhCcE--EEECCc-CHHHHHHHcCCCEEeccCCCcchh----hh-cCCceEECC-----------CCHHHHHH
Confidence 578877555 888874 446699999999999887666654 33 567777652 38899999
Q ss_pred HHHHHhcCChHHHHHHH
Q 010093 465 AVNEIMVGDRAEEMRSR 481 (518)
Q Consensus 465 av~~ll~~~~~~~~~~~ 481 (518)
++.++++ |++.+++
T Consensus 327 ~i~~ll~---d~~~~~~ 340 (376)
T 1v4v_A 327 VVKGLLE---NPEELSR 340 (376)
T ss_dssp HHHHHHT---CHHHHHH
T ss_pred HHHHHHh---ChHhhhh
Confidence 9999997 5554443
No 29
>3ot5_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, center for structural genomics of infec diseases, csgid, alpha beta; HET: PGE; 2.20A {Listeria monocytogenes}
Probab=99.29 E-value=1.8e-10 Score=116.03 Aligned_cols=136 Identities=12% Similarity=0.072 Sum_probs=84.4
Q ss_pred CCcEEEEecCCcccCCHHHHHHHHHHHHhC-----CCcEEEEEcCCCCCCCCCCCCCCChhHHHHH-hcCCCcEeecCcc
Q 010093 313 PYSVVYVCFGSLANFTSAQLMEIATGLEAS-----GRNFIWVVSKNKNDGGEGGNEDWLPEGFEKR-MEGKGLIIRGWAP 386 (518)
Q Consensus 313 ~~~vIyvslGS~~~~~~~~~~~l~~al~~~-----~~~~i~~~~~~~~~~~~~~~~~~lp~~~~~~-~~~~nv~~~~~~p 386 (518)
++++++++.|...... +.+..+++++..+ +.++++..+.+. . +-+..... ...+|+++.++++
T Consensus 223 ~~~~vlv~~~r~~~~~-~~l~~ll~a~~~l~~~~~~~~~v~~~~~~~------~----~~~~l~~~~~~~~~v~l~~~l~ 291 (403)
T 3ot5_A 223 DNRLILMTAHRRENLG-EPMQGMFEAVREIVESREDTELVYPMHLNP------A----VREKAMAILGGHERIHLIEPLD 291 (403)
T ss_dssp TCEEEEECCCCHHHHT-THHHHHHHHHHHHHHHCTTEEEEEECCSCH------H----HHHHHHHHHTTCTTEEEECCCC
T ss_pred CCCEEEEEeCcccccC-cHHHHHHHHHHHHHHhCCCceEEEecCCCH------H----HHHHHHHHhCCCCCEEEeCCCC
Confidence 4557777765432222 2245666666543 346666543321 0 11122221 1246899999986
Q ss_pred H---HHhhccCCCcccccccCchhHHHHHHhCCceecCCcccccchhHHHHHHhhhcceeeccccccccccCccChHHHH
Q 010093 387 Q---VLILDHEAVGGFVTHCGWNSTLEAVAAGVPLVTWPVAAEQFYNEKMVNEILKIGVGVGIQKWCRIVGDFVKRETIE 463 (518)
Q Consensus 387 q---~~lL~~~~~~~~ItHgG~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~e~~G~G~~l~~~~~~~~~~~~~~~~~l~ 463 (518)
+ ..+++.+++ +|+-.|..+ .||.++|+|+|++|-..+++. ++ +.|.|+.+. .++++|.
T Consensus 292 ~~~~~~l~~~ad~--vv~~SGg~~-~EA~a~g~PvV~~~~~~~~~e----~v-~~g~~~lv~-----------~d~~~l~ 352 (403)
T 3ot5_A 292 AIDFHNFLRKSYL--VFTDSGGVQ-EEAPGMGVPVLVLRDTTERPE----GI-EAGTLKLIG-----------TNKENLI 352 (403)
T ss_dssp HHHHHHHHHHEEE--EEECCHHHH-HHGGGTTCCEEECCSSCSCHH----HH-HHTSEEECC-----------SCHHHHH
T ss_pred HHHHHHHHHhcCE--EEECCccHH-HHHHHhCCCEEEecCCCcchh----he-eCCcEEEcC-----------CCHHHHH
Confidence 3 457777555 888765333 699999999999976666553 33 568776652 3789999
Q ss_pred HHHHHHhcCChHHHHHHH
Q 010093 464 KAVNEIMVGDRAEEMRSR 481 (518)
Q Consensus 464 ~av~~ll~~~~~~~~~~~ 481 (518)
+++.++|. ++..+++
T Consensus 353 ~ai~~ll~---~~~~~~~ 367 (403)
T 3ot5_A 353 KEALDLLD---NKESHDK 367 (403)
T ss_dssp HHHHHHHH---CHHHHHH
T ss_pred HHHHHHHc---CHHHHHH
Confidence 99999997 5555543
No 30
>3dzc_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, in diseases, isomerase, center for structural genomics of INFE diseases, csgid; 2.35A {Vibrio cholerae}
Probab=99.28 E-value=6.2e-11 Score=119.30 Aligned_cols=136 Identities=15% Similarity=0.135 Sum_probs=83.8
Q ss_pred CCcEEEEecCCcccCCHHHHHHHHHHHHhC-----CCcEEEEEcCCCCCCCCCCCCCCChhHHHHH-hcCCCcEeecCcc
Q 010093 313 PYSVVYVCFGSLANFTSAQLMEIATGLEAS-----GRNFIWVVSKNKNDGGEGGNEDWLPEGFEKR-MEGKGLIIRGWAP 386 (518)
Q Consensus 313 ~~~vIyvslGS~~~~~~~~~~~l~~al~~~-----~~~~i~~~~~~~~~~~~~~~~~~lp~~~~~~-~~~~nv~~~~~~p 386 (518)
++++|+++.+-...... .+..+++++..+ +.++++.++.+. . +-+.+... ...+|+++.++++
T Consensus 229 ~~~~vlv~~hR~~~~~~-~~~~ll~A~~~l~~~~~~~~~v~~~g~~~------~----~~~~l~~~~~~~~~v~~~~~lg 297 (396)
T 3dzc_A 229 SKKLILVTGHRRESFGG-GFERICQALITTAEQHPECQILYPVHLNP------N----VREPVNKLLKGVSNIVLIEPQQ 297 (396)
T ss_dssp TSEEEEEECSCBCCCTT-HHHHHHHHHHHHHHHCTTEEEEEECCBCH------H----HHHHHHHHTTTCTTEEEECCCC
T ss_pred CCCEEEEEECCcccchh-HHHHHHHHHHHHHHhCCCceEEEEeCCCh------H----HHHHHHHHHcCCCCEEEeCCCC
Confidence 45677776532222222 356677777654 446666544321 0 11122221 1246899987775
Q ss_pred ---HHHhhccCCCcccccccCchhHHHHHHhCCceecCCcccccchhHHHHHHhhhcceeeccccccccccCccChHHHH
Q 010093 387 ---QVLILDHEAVGGFVTHCGWNSTLEAVAAGVPLVTWPVAAEQFYNEKMVNEILKIGVGVGIQKWCRIVGDFVKRETIE 463 (518)
Q Consensus 387 ---q~~lL~~~~~~~~ItHgG~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~e~~G~G~~l~~~~~~~~~~~~~~~~~l~ 463 (518)
...+++.+++ +|+-.| |.+.||.++|+|+|+..-..+++ .++ +.|.++.+ ..++++|.
T Consensus 298 ~~~~~~l~~~ad~--vv~~SG-g~~~EA~a~G~PvV~~~~~~~~~----e~v-~~G~~~lv-----------~~d~~~l~ 358 (396)
T 3dzc_A 298 YLPFVYLMDRAHI--ILTDSG-GIQEEAPSLGKPVLVMRETTERP----EAV-AAGTVKLV-----------GTNQQQIC 358 (396)
T ss_dssp HHHHHHHHHHCSE--EEESCS-GGGTTGGGGTCCEEECCSSCSCH----HHH-HHTSEEEC-----------TTCHHHHH
T ss_pred HHHHHHHHHhcCE--EEECCc-cHHHHHHHcCCCEEEccCCCcch----HHH-HcCceEEc-----------CCCHHHHH
Confidence 3567777555 998887 55679999999999975555543 243 56877544 13689999
Q ss_pred HHHHHHhcCChHHHHHHH
Q 010093 464 KAVNEIMVGDRAEEMRSR 481 (518)
Q Consensus 464 ~av~~ll~~~~~~~~~~~ 481 (518)
+++.++|+ ++..+++
T Consensus 359 ~ai~~ll~---d~~~~~~ 373 (396)
T 3dzc_A 359 DALSLLLT---DPQAYQA 373 (396)
T ss_dssp HHHHHHHH---CHHHHHH
T ss_pred HHHHHHHc---CHHHHHH
Confidence 99999997 5555443
No 31
>3fro_A GLGA glycogen synthase; glycosyltransferase family, UDP/ADP-glucose-glycogen synthas rossman folds, transferase; HET: NHF; 2.50A {Pyrococcus abyssi} SCOP: c.87.1.8 PDB: 2bis_A* 3l01_A*
Probab=99.20 E-value=1.9e-08 Score=102.17 Aligned_cols=113 Identities=12% Similarity=0.015 Sum_probs=73.8
Q ss_pred CCcEeecCccHHH---hhccCCCccccc----ccCchhHHHHHHhCCceecCCcccccchhHHHHHHhhhcceeeccccc
Q 010093 377 KGLIIRGWAPQVL---ILDHEAVGGFVT----HCGWNSTLEAVAAGVPLVTWPVAAEQFYNEKMVNEILKIGVGVGIQKW 449 (518)
Q Consensus 377 ~nv~~~~~~pq~~---lL~~~~~~~~It----HgG~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~e~~G~G~~l~~~~~ 449 (518)
+++.+.+|+|+.+ ++..+++ +|. -|-.+++.||+++|+|+|+... ......+ ..|.|..+..
T Consensus 311 ~~~~~~g~~~~~~~~~~~~~adv--~v~ps~~e~~~~~~~EAma~G~Pvi~s~~----~~~~e~~--~~~~g~~~~~--- 379 (439)
T 3fro_A 311 NVKVITEMLSREFVRELYGSVDF--VIIPSYFEPFGLVALEAMCLGAIPIASAV----GGLRDII--TNETGILVKA--- 379 (439)
T ss_dssp TEEEECSCCCHHHHHHHHTTCSE--EEECBSCCSSCHHHHHHHHTTCEEEEESS----THHHHHC--CTTTCEEECT---
T ss_pred CEEEEcCCCCHHHHHHHHHHCCE--EEeCCCCCCccHHHHHHHHCCCCeEEcCC----CCcceeE--EcCceEEeCC---
Confidence 5666789899854 5766555 552 2334799999999999998643 3444444 3478888754
Q ss_pred cccccCccChHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHhh
Q 010093 450 CRIVGDFVKRETIEKAVNEIMVGDRAEEMRSRAKALGKMAKRAVENGGSSYSDLSALIEELRLS 513 (518)
Q Consensus 450 ~~~~~~~~~~~~l~~av~~ll~~~~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 513 (518)
.+++++.++|.++++.+ .+..+++++..++.+ +..+....++++++.++..
T Consensus 380 -------~d~~~la~~i~~ll~~~-----~~~~~~~~~~~~~~~-~~~s~~~~~~~~~~~~~~~ 430 (439)
T 3fro_A 380 -------GDPGELANAILKALELS-----RSDLSKFRENCKKRA-MSFSWEKSAERYVKAYTGS 430 (439)
T ss_dssp -------TCHHHHHHHHHHHHHHT-----TTTTHHHHHHHHHHH-HTSCHHHHHHHHHHHHHTC
T ss_pred -------CCHHHHHHHHHHHHhcC-----HHHHHHHHHHHHHHH-hhCcHHHHHHHHHHHHHHH
Confidence 48999999999999601 122233444444333 3466777777777766644
No 32
>1vgv_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, isomerase; HET: UD1; 2.31A {Escherichia coli} SCOP: c.87.1.3 PDB: 1f6d_A*
Probab=99.18 E-value=6.6e-10 Score=111.27 Aligned_cols=135 Identities=18% Similarity=0.170 Sum_probs=85.6
Q ss_pred CCcEEEEecCCcccCCHHHHHHHHHHHHhC-----CCcEEEEEcCCCCCCCCCCCCCCChhHHHHH-hcCCCcEeecCcc
Q 010093 313 PYSVVYVCFGSLANFTSAQLMEIATGLEAS-----GRNFIWVVSKNKNDGGEGGNEDWLPEGFEKR-MEGKGLIIRGWAP 386 (518)
Q Consensus 313 ~~~vIyvslGS~~~~~~~~~~~l~~al~~~-----~~~~i~~~~~~~~~~~~~~~~~~lp~~~~~~-~~~~nv~~~~~~p 386 (518)
++++|+++.|...... +.+..+++++..+ +.++++..+.+. . +-+.+... ...+|+.+.++++
T Consensus 204 ~~~~vl~~~gr~~~~~-kg~~~li~a~~~l~~~~~~~~l~i~~g~~~------~----~~~~l~~~~~~~~~v~~~g~~~ 272 (384)
T 1vgv_A 204 DKKMILVTGHRRESFG-RGFEEICHALADIATTHQDIQIVYPVHLNP------N----VREPVNRILGHVKNVILIDPQE 272 (384)
T ss_dssp TSEEEEEECCCBSSCC-HHHHHHHHHHHHHHHHCTTEEEEEECCBCH------H----HHHHHHHHHTTCTTEEEECCCC
T ss_pred CCCEEEEEeCCccccc-hHHHHHHHHHHHHHhhCCCeEEEEEcCCCH------H----HHHHHHHHhhcCCCEEEeCCCC
Confidence 3557888888765322 4456666766643 345555433211 0 11122222 1236899977776
Q ss_pred H---HHhhccCCCcccccccCchhHHHHHHhCCceecCCcccccchhHHHHHHhhhcceeeccccccccccCccChHHHH
Q 010093 387 Q---VLILDHEAVGGFVTHCGWNSTLEAVAAGVPLVTWPVAAEQFYNEKMVNEILKIGVGVGIQKWCRIVGDFVKRETIE 463 (518)
Q Consensus 387 q---~~lL~~~~~~~~ItHgG~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~e~~G~G~~l~~~~~~~~~~~~~~~~~l~ 463 (518)
+ ..++..+++ ||+..|. .+.||+++|+|+|+.+..++. ..++ ..|.|..+. . ++++|.
T Consensus 273 ~~~~~~~~~~ad~--~v~~Sg~-~~lEA~a~G~PvI~~~~~~~~----~e~v-~~g~g~lv~----------~-d~~~la 333 (384)
T 1vgv_A 273 YLPFVWLMNHAWL--ILTDSGG-IQEEAPSLGKPVLVMRDTTER----PEAV-TAGTVRLVG----------T-DKQRIV 333 (384)
T ss_dssp HHHHHHHHHHCSE--EEESSST-GGGTGGGGTCCEEEESSCCSC----HHHH-HHTSEEEEC----------S-SHHHHH
T ss_pred HHHHHHHHHhCcE--EEECCcc-hHHHHHHcCCCEEEccCCCCc----chhh-hCCceEEeC----------C-CHHHHH
Confidence 4 567877665 8888754 488999999999999874443 3343 568887762 2 789999
Q ss_pred HHHHHHhcCChHHHHHH
Q 010093 464 KAVNEIMVGDRAEEMRS 480 (518)
Q Consensus 464 ~av~~ll~~~~~~~~~~ 480 (518)
++|.++++ |++.++
T Consensus 334 ~~i~~ll~---d~~~~~ 347 (384)
T 1vgv_A 334 EEVTRLLK---DENEYQ 347 (384)
T ss_dssp HHHHHHHH---CHHHHH
T ss_pred HHHHHHHh---ChHHHh
Confidence 99999997 554443
No 33
>2r60_A Glycosyl transferase, group 1; rossmann-fold; 1.80A {Halothermothrix orenii} PDB: 2r66_A* 2r68_A*
Probab=99.15 E-value=3e-08 Score=102.94 Aligned_cols=167 Identities=14% Similarity=0.040 Sum_probs=97.0
Q ss_pred EEEEecCCcccCCHHHHHHHHHHHHhCCC-----cEEEEEcCCCCCCCC-CCCCCCC-------hhHHHHH----hcCCC
Q 010093 316 VVYVCFGSLANFTSAQLMEIATGLEASGR-----NFIWVVSKNKNDGGE-GGNEDWL-------PEGFEKR----MEGKG 378 (518)
Q Consensus 316 vIyvslGS~~~~~~~~~~~l~~al~~~~~-----~~i~~~~~~~~~~~~-~~~~~~l-------p~~~~~~----~~~~n 378 (518)
.+++..|.+. ..+.+..++++++.+.. ..++.+|... ++ .+... + -+.+... ...++
T Consensus 263 ~~i~~vGrl~--~~Kg~~~li~a~~~l~~~~~~~~~l~i~G~~~---~~~~~y~~-l~~~~~~y~~~l~~~~~~~~l~~~ 336 (499)
T 2r60_A 263 PAIIASSRLD--QKKNHYGLVEAYVQNKELQDKANLVLTLRGIE---NPFEDYSR-AGQEEKEILGKIIELIDNNDCRGK 336 (499)
T ss_dssp CEEEECSCCC--GGGCHHHHHHHHHTCHHHHHHCEEEEEESSCS---BTTTBCTT-SCHHHHHHHHHHHHHHHHTTCBTT
T ss_pred cEEEEeecCc--cccCHHHHHHHHHHHHHhCCCceEEEEECCCC---Cccccccc-ccccchHHHHHHHHHHHhcCCCce
Confidence 4567778764 35667778888887632 2345555421 00 00000 1 1122211 12568
Q ss_pred cEeecCccHH---HhhccC----CCccccc---c-cCchhHHHHHHhCCceecCCcccccchhHHHHHHhhhcceeeccc
Q 010093 379 LIIRGWAPQV---LILDHE----AVGGFVT---H-CGWNSTLEAVAAGVPLVTWPVAAEQFYNEKMVNEILKIGVGVGIQ 447 (518)
Q Consensus 379 v~~~~~~pq~---~lL~~~----~~~~~It---H-gG~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~e~~G~G~~l~~~ 447 (518)
|.+.+++|+. .++..+ ++ +|. + |-..++.||+++|+|+|+... ......+ +....|..++.
T Consensus 337 V~~~G~v~~~~~~~~~~~a~~~~dv--~v~pS~~Eg~~~~~lEAma~G~PvI~s~~----~g~~e~v-~~~~~g~l~~~- 408 (499)
T 2r60_A 337 VSMFPLNSQQELAGCYAYLASKGSV--FALTSFYEPFGLAPVEAMASGLPAVVTRN----GGPAEIL-DGGKYGVLVDP- 408 (499)
T ss_dssp EEEEECCSHHHHHHHHHHHHHTTCE--EEECCSCBCCCSHHHHHHHTTCCEEEESS----BHHHHHT-GGGTSSEEECT-
T ss_pred EEECCCCCHHHHHHHHHhcCcCCCE--EEECcccCCCCcHHHHHHHcCCCEEEecC----CCHHHHh-cCCceEEEeCC-
Confidence 9999999864 466665 55 552 2 334689999999999998753 3445555 35447888754
Q ss_pred cccccccCccChHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHH
Q 010093 448 KWCRIVGDFVKRETIEKAVNEIMVGDRAEEMRSRAKALGKMAKRAVENGGSSYSDLSALIEELR 511 (518)
Q Consensus 448 ~~~~~~~~~~~~~~l~~av~~ll~~~~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~~~ 511 (518)
.+.+++.++|.++++ ++..+++ +++..++.+.+..+.....+++.+.+.
T Consensus 409 ---------~d~~~la~~i~~ll~---~~~~~~~---~~~~a~~~~~~~fs~~~~~~~~~~~y~ 457 (499)
T 2r60_A 409 ---------EDPEDIARGLLKAFE---SEETWSA---YQEKGKQRVEERYTWQETARGYLEVIQ 457 (499)
T ss_dssp ---------TCHHHHHHHHHHHHS---CHHHHHH---HHHHHHHHHHHHSBHHHHHHHHHHHHH
T ss_pred ---------CCHHHHHHHHHHHHh---CHHHHHH---HHHHHHHHHHHhCCHHHHHHHHHHHHH
Confidence 488999999999997 5444332 333333333344555554555544444
No 34
>2jjm_A Glycosyl transferase, group 1 family protein; anthrax, nucleotide, carbohydrate; 3.10A {Bacillus anthracis} PDB: 3mbo_A*
Probab=99.15 E-value=8.1e-08 Score=96.33 Aligned_cols=349 Identities=12% Similarity=0.060 Sum_probs=180.6
Q ss_pred cEEEEEcCC-CccChHHHHHHHHHHHhCCCeEEEEeCCCCccchhhhhhhhhccCCCeEEEEeeCCCccCCCCCCCCccc
Q 010093 36 LHVFFFPFM-AHGHMIPIVDMAKLFATRGVKASVITTPANAPYVSKSVERANELGIEMDVKTIKFPSVEAGLPEGCENLD 114 (518)
Q Consensus 36 ~kIl~~~~~-~~GH~~p~l~LA~~L~~rGH~Vt~~~~~~~~~~~~~~~~~~~~~g~~i~~~~ip~~~~~~~l~~~~~~~~ 114 (518)
.++....+| ..|.-.-+..|+++|.++||+|++++...... ... ...++.+..++.+. .+. ..
T Consensus 16 ~~~~~~~~p~~GG~~~~~~~la~~L~~~G~~V~v~~~~~~~~-~~~-------~~~~i~~~~~~~~~----~~~----~~ 79 (394)
T 2jjm_A 16 LKIGITCYPSVGGSGVVGTELGKQLAERGHEIHFITSGLPFR-LNK-------VYPNIYFHEVTVNQ----YSV----FQ 79 (394)
T ss_dssp CEEEEECCC--CHHHHHHHHHHHHHHHTTCEEEEECSSCC-----C-------CCTTEEEECCCCC------------CC
T ss_pred eeeehhcCCCCCCHHHHHHHHHHHHHhCCCEEEEEeCCCCCc-ccc-------cCCceEEEeccccc----ccc----cc
Confidence 477766666 45666778899999999999999999853211 111 11245555443221 000 00
Q ss_pred cccchhhhhhHHHHHHHHHhhHHHHHHHHhhCCCCEEEecCCCc--cHHHHHHHc---CCCeEEEecchHHHHHHHhhhh
Q 010093 115 AITNEVNKGLIVKFFGATMKLQEPLEQLLQEHKPDCLVADTFFP--WATDAAAKF---GIPRLVFHGTSFFSLCASNCLA 189 (518)
Q Consensus 115 ~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~~pDlVI~D~~~~--~~~~iA~~l---giP~v~~~~~~~~~~~~~~~~~ 189 (518)
.. . ..+ .....+.+++++.+||+|++..... ....++..+ ++|+|..........
T Consensus 80 ~~-~----~~~--------~~~~~l~~~l~~~~~Dvv~~~~~~~~~~~~~~~~~~~~~~~p~v~~~h~~~~~~------- 139 (394)
T 2jjm_A 80 YP-P----YDL--------ALASKMAEVAQRENLDILHVHYAIPHAICAYLAKQMIGERIKIVTTLHGTDITV------- 139 (394)
T ss_dssp SC-C----HHH--------HHHHHHHHHHHHHTCSEEEECSSTTHHHHHHHHHHHTTTCSEEEEECCHHHHHT-------
T ss_pred cc-c----ccH--------HHHHHHHHHHHHcCCCEEEEcchhHHHHHHHHHHHhhcCCCCEEEEEecCcccc-------
Confidence 00 0 000 1123456667778999999875433 223344433 599887554421100
Q ss_pred hcCCCCCCCCCCCccccCCCCCCccccCCCCCcccccCCCCchHHHHHHHhhhhcccccEEEEcCccccchHHHHHHHHh
Q 010093 190 LYEPHKKVSSDSEPFVMPHFPGEIKLTRNQLPDFVKQDMGDNDFSRLLKAIDDSDLRSYGVAVNSFYELEPAYADHYRKA 269 (518)
Q Consensus 190 ~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ns~~~L~~~~~~~~~~~ 269 (518)
.+... . ....... ....++.++..+.. ....+...
T Consensus 140 -----------------~~~~~-----------~---------~~~~~~~---~~~~ad~ii~~s~~-----~~~~~~~~ 174 (394)
T 2jjm_A 140 -----------------LGSDP-----------S---------LNNLIRF---GIEQSDVVTAVSHS-----LINETHEL 174 (394)
T ss_dssp -----------------TTTCT-----------T---------THHHHHH---HHHHSSEEEESCHH-----HHHHHHHH
T ss_pred -----------------cCCCH-----------H---------HHHHHHH---HHhhCCEEEECCHH-----HHHHHHHh
Confidence 00000 0 0111111 12345666665532 22223333
Q ss_pred hC--CcEEEeCccccCCcCchhhhhcCCCCCcChhHHhHhhhcCCCCcEEEEecCCcccCCHHHHHHHHHHHHhC----C
Q 010093 270 LG--RRAWHIGPVSLCNRNFEDKALRGKQASIDELECLKWLNSKQPYSVVYVCFGSLANFTSAQLMEIATGLEAS----G 343 (518)
Q Consensus 270 ~~--~~v~~vGpl~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~vIyvslGS~~~~~~~~~~~l~~al~~~----~ 343 (518)
++ .++..|+.-..... . .+. ...++..-+.-. ++..+++..|.+.. .+.+..++++++.+ +
T Consensus 175 ~~~~~~~~vi~ngv~~~~-~--------~~~-~~~~~~~~~~~~-~~~~~i~~~G~~~~--~Kg~~~li~a~~~l~~~~~ 241 (394)
T 2jjm_A 175 VKPNKDIQTVYNFIDERV-Y--------FKR-DMTQLKKEYGIS-ESEKILIHISNFRK--VKRVQDVVQAFAKIVTEVD 241 (394)
T ss_dssp TCCSSCEEECCCCCCTTT-C--------CCC-CCHHHHHHTTCC----CEEEEECCCCG--GGTHHHHHHHHHHHHHSSC
T ss_pred hCCcccEEEecCCccHHh-c--------CCc-chHHHHHHcCCC-CCCeEEEEeecccc--ccCHHHHHHHHHHHHhhCC
Confidence 32 46666663322111 0 000 112233322211 12245566787653 44555566666543 4
Q ss_pred CcEEEEEcCCCCCCCCCCCCCCChhHHHHHh----cCCCcEeecCccH-HHhhccCCCcccc----cccCchhHHHHHHh
Q 010093 344 RNFIWVVSKNKNDGGEGGNEDWLPEGFEKRM----EGKGLIIRGWAPQ-VLILDHEAVGGFV----THCGWNSTLEAVAA 414 (518)
Q Consensus 344 ~~~i~~~~~~~~~~~~~~~~~~lp~~~~~~~----~~~nv~~~~~~pq-~~lL~~~~~~~~I----tHgG~~s~~eal~~ 414 (518)
.+++ .+|.+. ..+.+.... ..+||.+.++..+ ..++..+++ +| .-|..+++.||+++
T Consensus 242 ~~l~-i~G~g~-----------~~~~l~~~~~~~~l~~~v~~~g~~~~~~~~~~~adv--~v~ps~~e~~~~~~~EAma~ 307 (394)
T 2jjm_A 242 AKLL-LVGDGP-----------EFCTILQLVKNLHIEDRVLFLGKQDNVAELLAMSDL--MLLLSEKESFGLVLLEAMAC 307 (394)
T ss_dssp CEEE-EECCCT-----------THHHHHHHHHTTTCGGGBCCCBSCSCTHHHHHTCSE--EEECCSCCSCCHHHHHHHHT
T ss_pred CEEE-EECCch-----------HHHHHHHHHHHcCCCCeEEEeCchhhHHHHHHhCCE--EEeccccCCCchHHHHHHhc
Confidence 4443 344333 112222221 1468888887653 678877665 66 45666899999999
Q ss_pred CCceecCCcccccchhHHHHHHhhhcceeeccccccccccCccChHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHh
Q 010093 415 GVPLVTWPVAAEQFYNEKMVNEILKIGVGVGIQKWCRIVGDFVKRETIEKAVNEIMVGDRAEEMRSRAKALGKMAKRAVE 494 (518)
Q Consensus 415 GvP~l~~P~~~DQ~~na~~v~e~~G~G~~l~~~~~~~~~~~~~~~~~l~~av~~ll~~~~~~~~~~~a~~l~~~~~~~~~ 494 (518)
|+|+|+.+.. .....+ +..+.|..++. -+.+++.++|.++++ ++..++ ++++..++.+.
T Consensus 308 G~PvI~~~~~----~~~e~v-~~~~~g~~~~~----------~d~~~la~~i~~l~~---~~~~~~---~~~~~~~~~~~ 366 (394)
T 2jjm_A 308 GVPCIGTRVG----GIPEVI-QHGDTGYLCEV----------GDTTGVADQAIQLLK---DEELHR---NMGERARESVY 366 (394)
T ss_dssp TCCEEEECCT----TSTTTC-CBTTTEEEECT----------TCHHHHHHHHHHHHH---CHHHHH---HHHHHHHHHHH
T ss_pred CCCEEEecCC----ChHHHh-hcCCceEEeCC----------CCHHHHHHHHHHHHc---CHHHHH---HHHHHHHHHHH
Confidence 9999987642 233344 34457777754 378999999999997 444333 33333333334
Q ss_pred cCCCcHHHHHHHHHHHHhh
Q 010093 495 NGGSSYSDLSALIEELRLS 513 (518)
Q Consensus 495 ~~g~~~~~~~~~~~~~~~~ 513 (518)
+..+.+..++.+++.+++.
T Consensus 367 ~~~s~~~~~~~~~~~~~~~ 385 (394)
T 2jjm_A 367 EQFRSEKIVSQYETIYYDV 385 (394)
T ss_dssp HHSCHHHHHHHHHHHHHHT
T ss_pred HhCCHHHHHHHHHHHHHHH
Confidence 4566666666666666543
No 35
>2x6q_A Trehalose-synthase TRET; biosynthetic protein; 2.20A {Pyrococcus horikoshii} PDB: 2x6r_A 2xa1_A 2xa2_A* 2xa9_A* 2xmp_A*
Probab=99.08 E-value=2e-08 Score=101.56 Aligned_cols=111 Identities=14% Similarity=0.006 Sum_probs=71.9
Q ss_pred CCCcEeecCcc---H---HHhhccCCCcccccc----cCchhHHHHHHhCCceecCCcccccchhHHHHHHhhhcceeec
Q 010093 376 GKGLIIRGWAP---Q---VLILDHEAVGGFVTH----CGWNSTLEAVAAGVPLVTWPVAAEQFYNEKMVNEILKIGVGVG 445 (518)
Q Consensus 376 ~~nv~~~~~~p---q---~~lL~~~~~~~~ItH----gG~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~e~~G~G~~l~ 445 (518)
.+||.+.+|++ + ..++..+++ +|.- |..+++.||+++|+|+|+.+. ..+...+ +..+.|..+
T Consensus 292 ~~~V~~~G~~~~~~~~~~~~~~~~ad~--~v~ps~~E~~~~~~lEAma~G~PvI~~~~----~g~~e~i-~~~~~g~l~- 363 (416)
T 2x6q_A 292 DYDVKVLTNLIGVHAREVNAFQRASDV--ILQMSIREGFGLTVTEAMWKGKPVIGRAV----GGIKFQI-VDGETGFLV- 363 (416)
T ss_dssp CTTEEEEEGGGTCCHHHHHHHHHHCSE--EEECCSSCSSCHHHHHHHHTTCCEEEESC----HHHHHHC-CBTTTEEEE-
T ss_pred CCcEEEecccCCCCHHHHHHHHHhCCE--EEECCCcCCCccHHHHHHHcCCCEEEccC----CCChhhe-ecCCCeEEE-
Confidence 47999998776 2 446766555 6543 345789999999999999764 3445555 354567665
Q ss_pred cccccccccCccChHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHH
Q 010093 446 IQKWCRIVGDFVKRETIEKAVNEIMVGDRAEEMRSRAKALGKMAKRAVENGGSSYSDLSALIEELR 511 (518)
Q Consensus 446 ~~~~~~~~~~~~~~~~l~~av~~ll~~~~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~~~ 511 (518)
. +.+++.++|.++++ ++..+++ +++..++.+.+..+....++++++.++
T Consensus 364 ----------~-d~~~la~~i~~ll~---~~~~~~~---~~~~a~~~~~~~fs~~~~~~~~~~~~~ 412 (416)
T 2x6q_A 364 ----------R-DANEAVEVVLYLLK---HPEVSKE---MGAKAKERVRKNFIITKHMERYLDILN 412 (416)
T ss_dssp ----------S-SHHHHHHHHHHHHH---CHHHHHH---HHHHHHHHHHHHTBHHHHHHHHHHHHH
T ss_pred ----------C-CHHHHHHHHHHHHh---CHHHHHH---HHHHHHHHHHHHcCHHHHHHHHHHHHH
Confidence 3 78899999999997 5444333 333333333444565555566655544
No 36
>2iw1_A Lipopolysaccharide core biosynthesis protein RFAG; transferase, lipopolysaccharide biosynthesis, family GT-4, glycosyltransferase, LPS; HET: U2F; 1.5A {Escherichia coli} SCOP: c.87.1.8 PDB: 2iv7_A*
Probab=99.06 E-value=1e-07 Score=94.60 Aligned_cols=135 Identities=14% Similarity=0.161 Sum_probs=90.5
Q ss_pred cEEEEecCCcccCCHHHHHHHHHHHHhCCCc-----EEEEEcCCCCCCCCCCCCCCChhHHHH---H-hcCCCcEeecCc
Q 010093 315 SVVYVCFGSLANFTSAQLMEIATGLEASGRN-----FIWVVSKNKNDGGEGGNEDWLPEGFEK---R-MEGKGLIIRGWA 385 (518)
Q Consensus 315 ~vIyvslGS~~~~~~~~~~~l~~al~~~~~~-----~i~~~~~~~~~~~~~~~~~~lp~~~~~---~-~~~~nv~~~~~~ 385 (518)
..+++..|+.. ..+.+..++++++.+... -++.+|.+. . +.+.. + ...+|+.+.++.
T Consensus 196 ~~~i~~~G~~~--~~K~~~~li~a~~~l~~~~~~~~~l~i~G~g~-----------~-~~~~~~~~~~~~~~~v~~~g~~ 261 (374)
T 2iw1_A 196 QNLLLQVGSDF--GRKGVDRSIEALASLPESLRHNTLLFVVGQDK-----------P-RKFEALAEKLGVRSNVHFFSGR 261 (374)
T ss_dssp CEEEEEECSCT--TTTTHHHHHHHHHTSCHHHHHTEEEEEESSSC-----------C-HHHHHHHHHHTCGGGEEEESCC
T ss_pred CeEEEEeccch--hhcCHHHHHHHHHHhHhccCCceEEEEEcCCC-----------H-HHHHHHHHHcCCCCcEEECCCc
Confidence 36667778764 345677788888876432 334444432 1 12221 1 124689999886
Q ss_pred cH-HHhhccCCCccccc----ccCchhHHHHHHhCCceecCCcccccchhHHHHHHhhhcceeeccccccccccCccChH
Q 010093 386 PQ-VLILDHEAVGGFVT----HCGWNSTLEAVAAGVPLVTWPVAAEQFYNEKMVNEILKIGVGVGIQKWCRIVGDFVKRE 460 (518)
Q Consensus 386 pq-~~lL~~~~~~~~It----HgG~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~e~~G~G~~l~~~~~~~~~~~~~~~~ 460 (518)
.+ ..++..+++ +|. -|..+++.||+++|+|+|+.+. ..+...+ +..+.|..+.. ..+.+
T Consensus 262 ~~~~~~~~~ad~--~v~ps~~e~~~~~~~Ea~a~G~Pvi~~~~----~~~~e~i-~~~~~g~~~~~---------~~~~~ 325 (374)
T 2iw1_A 262 NDVSELMAAADL--LLHPAYQEAAGIVLLEAITAGLPVLTTAV----CGYAHYI-ADANCGTVIAE---------PFSQE 325 (374)
T ss_dssp SCHHHHHHHCSE--EEECCSCCSSCHHHHHHHHHTCCEEEETT----STTTHHH-HHHTCEEEECS---------SCCHH
T ss_pred ccHHHHHHhcCE--EEeccccCCcccHHHHHHHCCCCEEEecC----CCchhhh-ccCCceEEeCC---------CCCHH
Confidence 54 668877666 664 4667899999999999999765 3456677 57788888852 24899
Q ss_pred HHHHHHHHHhcCChHHHHHHHH
Q 010093 461 TIEKAVNEIMVGDRAEEMRSRA 482 (518)
Q Consensus 461 ~l~~av~~ll~~~~~~~~~~~a 482 (518)
++.++|.++++ ++..+++.
T Consensus 326 ~l~~~i~~l~~---~~~~~~~~ 344 (374)
T 2iw1_A 326 QLNEVLRKALT---QSPLRMAW 344 (374)
T ss_dssp HHHHHHHHHHH---CHHHHHHH
T ss_pred HHHHHHHHHHc---ChHHHHHH
Confidence 99999999997 54544433
No 37
>2iuy_A Avigt4, glycosyltransferase; antibiotics, family GT-4, avilamycin A; HET: MES; 2.1A {Streptomyces viridochromogenes} PDB: 2iv3_A*
Probab=99.05 E-value=6.8e-09 Score=102.13 Aligned_cols=122 Identities=18% Similarity=0.218 Sum_probs=81.9
Q ss_pred EEEecCCcccCCHHHHHHHHHHHHhCCCcEEEEEcCCCCCCCCCCCCCCChhHHH---HHhcCCCcEeecCccHH---Hh
Q 010093 317 VYVCFGSLANFTSAQLMEIATGLEASGRNFIWVVSKNKNDGGEGGNEDWLPEGFE---KRMEGKGLIIRGWAPQV---LI 390 (518)
Q Consensus 317 IyvslGS~~~~~~~~~~~l~~al~~~~~~~i~~~~~~~~~~~~~~~~~~lp~~~~---~~~~~~nv~~~~~~pq~---~l 390 (518)
+++..|++. ..+.+..++++++.++.++++. |.+. ..+.+. ... .+|+.+.+|+|+. .+
T Consensus 164 ~i~~vG~~~--~~Kg~~~li~a~~~~~~~l~i~-G~g~-----------~~~~l~~~~~~~-~~~v~~~g~~~~~~l~~~ 228 (342)
T 2iuy_A 164 FLLFMGRVS--PHKGALEAAAFAHACGRRLVLA-GPAW-----------EPEYFDEITRRY-GSTVEPIGEVGGERRLDL 228 (342)
T ss_dssp CEEEESCCC--GGGTHHHHHHHHHHHTCCEEEE-SCCC-----------CHHHHHHHHHHH-TTTEEECCCCCHHHHHHH
T ss_pred EEEEEeccc--cccCHHHHHHHHHhcCcEEEEE-eCcc-----------cHHHHHHHHHHh-CCCEEEeccCCHHHHHHH
Confidence 345567765 4566778888888887776655 3322 112222 222 3799999999975 67
Q ss_pred hccCCCcccc--cc-----------cC-chhHHHHHHhCCceecCCcccccchhHHHHHHh--hhcceeecccccccccc
Q 010093 391 LDHEAVGGFV--TH-----------CG-WNSTLEAVAAGVPLVTWPVAAEQFYNEKMVNEI--LKIGVGVGIQKWCRIVG 454 (518)
Q Consensus 391 L~~~~~~~~I--tH-----------gG-~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~e~--~G~G~~l~~~~~~~~~~ 454 (518)
+..+++ +| +. -| .+++.||+++|+|+|+... ..+...+ +. -+.|..+ .
T Consensus 229 ~~~adv--~v~ps~~~~~~~~~~~~E~~~~~~~EAma~G~PvI~s~~----~~~~e~~-~~~~~~~g~~~--~------- 292 (342)
T 2iuy_A 229 LASAHA--VLAMSQAVTGPWGGIWCEPGATVVSEAAVSGTPVVGTGN----GCLAEIV-PSVGEVVGYGT--D------- 292 (342)
T ss_dssp HHHCSE--EEECCCCCCCTTCSCCCCCCCHHHHHHHHTTCCEEECCT----TTHHHHG-GGGEEECCSSS--C-------
T ss_pred HHhCCE--EEECCcccccccccccccCccHHHHHHHhcCCCEEEcCC----CChHHHh-cccCCCceEEc--C-------
Confidence 877666 55 22 33 4689999999999999875 3345555 34 3456554 2
Q ss_pred CccChHHHHHHHHHHhc
Q 010093 455 DFVKRETIEKAVNEIMV 471 (518)
Q Consensus 455 ~~~~~~~l~~av~~ll~ 471 (518)
. +.+++.++|.++++
T Consensus 293 -~-d~~~l~~~i~~l~~ 307 (342)
T 2iuy_A 293 -F-APDEARRTLAGLPA 307 (342)
T ss_dssp -C-CHHHHHHHHHTSCC
T ss_pred -C-CHHHHHHHHHHHHH
Confidence 5 89999999999984
No 38
>3beo_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, allosteric, regulation, isomerase; HET: UD1 UDP; 1.70A {Bacillus anthracis} PDB: 1o6c_A
Probab=99.04 E-value=1.1e-07 Score=94.57 Aligned_cols=135 Identities=13% Similarity=0.095 Sum_probs=82.3
Q ss_pred CCcEEEEecCCcccCCHHHHHHHHHHHHhC-----CCcEEEEEcCCCCCCCCCCCCCCChhHHHHHh-cCCCcEeecCcc
Q 010093 313 PYSVVYVCFGSLANFTSAQLMEIATGLEAS-----GRNFIWVVSKNKNDGGEGGNEDWLPEGFEKRM-EGKGLIIRGWAP 386 (518)
Q Consensus 313 ~~~vIyvslGS~~~~~~~~~~~l~~al~~~-----~~~~i~~~~~~~~~~~~~~~~~~lp~~~~~~~-~~~nv~~~~~~p 386 (518)
++++++++.|..... .+.+..++++++.+ +.++++ +.+. + . .+-+...... ..+|+++.++++
T Consensus 204 ~~~~vl~~~gr~~~~-~K~~~~li~a~~~l~~~~~~~~~i~--~~g~------~-~-~~~~~~~~~~~~~~~v~~~g~~~ 272 (375)
T 3beo_A 204 NNRLVLMTAHRRENL-GEPMRNMFRAIKRLVDKHEDVQVVY--PVHM------N-P-VVRETANDILGDYGRIHLIEPLD 272 (375)
T ss_dssp TSEEEEEECCCGGGT-THHHHHHHHHHHHHHHHCTTEEEEE--ECCS------C-H-HHHHHHHHHHTTCTTEEEECCCC
T ss_pred CCCeEEEEecccccc-hhHHHHHHHHHHHHHhhCCCeEEEE--eCCC------C-H-HHHHHHHHHhhccCCEEEeCCCC
Confidence 345777777765432 14566777777653 334433 3322 0 0 0111111111 236899978777
Q ss_pred H---HHhhccCCCcccccccCchhHHHHHHhCCceecCCcccccchhHHHHHHhhhcceeeccccccccccCccChHHHH
Q 010093 387 Q---VLILDHEAVGGFVTHCGWNSTLEAVAAGVPLVTWPVAAEQFYNEKMVNEILKIGVGVGIQKWCRIVGDFVKRETIE 463 (518)
Q Consensus 387 q---~~lL~~~~~~~~ItHgG~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~e~~G~G~~l~~~~~~~~~~~~~~~~~l~ 463 (518)
+ ..++..+++ ||+..| +.+.||+++|+|+|+....+.. ..+. ..|.|..+. .++++|.
T Consensus 273 ~~~~~~~~~~ad~--~v~~sg-~~~lEA~a~G~Pvi~~~~~~~~----~e~v-~~g~g~~v~-----------~d~~~la 333 (375)
T 3beo_A 273 VIDFHNVAARSYL--MLTDSG-GVQEEAPSLGVPVLVLRDTTER----PEGI-EAGTLKLAG-----------TDEETIF 333 (375)
T ss_dssp HHHHHHHHHTCSE--EEECCH-HHHHHHHHHTCCEEECSSCCSC----HHHH-HTTSEEECC-----------SCHHHHH
T ss_pred HHHHHHHHHhCcE--EEECCC-ChHHHHHhcCCCEEEecCCCCC----ceee-cCCceEEcC-----------CCHHHHH
Confidence 5 457766555 888763 4588999999999988543332 2343 567777662 2789999
Q ss_pred HHHHHHhcCChHHHHHH
Q 010093 464 KAVNEIMVGDRAEEMRS 480 (518)
Q Consensus 464 ~av~~ll~~~~~~~~~~ 480 (518)
+++.++++ |++.++
T Consensus 334 ~~i~~ll~---~~~~~~ 347 (375)
T 3beo_A 334 SLADELLS---DKEAHD 347 (375)
T ss_dssp HHHHHHHH---CHHHHH
T ss_pred HHHHHHHh---ChHhHh
Confidence 99999997 555444
No 39
>4hwg_A UDP-N-acetylglucosamine 2-epimerase; ssgcid, structural genomics, seattle structural genomics center for infectious disease, isomerase; 2.00A {Rickettsia bellii}
Probab=99.00 E-value=1.6e-08 Score=101.04 Aligned_cols=316 Identities=16% Similarity=0.088 Sum_probs=167.5
Q ss_pred CCcEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCCCCcc-chhhhhhhhhccCCCeEEEEeeCCCccCCCCCCCCc
Q 010093 34 PQLHVFFFPFMAHGHMIPIVDMAKLFATRGVKASVITTPANAP-YVSKSVERANELGIEMDVKTIKFPSVEAGLPEGCEN 112 (518)
Q Consensus 34 ~~~kIl~~~~~~~GH~~p~l~LA~~L~~rGH~Vt~~~~~~~~~-~~~~~~~~~~~~g~~i~~~~ip~~~~~~~l~~~~~~ 112 (518)
+|+|++++ ++++-.+.-+.+|.++|.++ +++.++.+....+ .+.. +-|..+.++.++-.+..+..
T Consensus 8 ~~~~~~~v-~GtRpe~~k~~p~~~~l~~~-~~~~~~~tgqh~~~~~~~-----------~~~~~~~i~~~~~~l~~~~~- 73 (385)
T 4hwg_A 8 HMLKVMTI-VGTRPELIKLCCVISEFDKH-TKHILVHTGQNYAYELNQ-----------VFFDDMGIRKPDYFLEVAAD- 73 (385)
T ss_dssp CCCEEEEE-ECSHHHHHHHHHHHHHHHHH-SEEEEEECSCHHHHHHTH-----------HHHC-CCCCCCSEECCCCCC-
T ss_pred hhhheeEE-EEcCHhHHHHHHHHHHHHhc-CCEEEEEeCCCCChhHHH-----------HHHhhCCCCCCceecCCCCC-
Confidence 57777664 67888888999999999887 9988887764322 2221 11222222111111111110
Q ss_pred cccccchhhhhhHHHHHHHHHhhHHHHHHHHhhCCCCEEEe--cCCCccHHHHHHHcCCCeEEEecchHHHHHHHhhhhh
Q 010093 113 LDAITNEVNKGLIVKFFGATMKLQEPLEQLLQEHKPDCLVA--DTFFPWATDAAAKFGIPRLVFHGTSFFSLCASNCLAL 190 (518)
Q Consensus 113 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~~pDlVI~--D~~~~~~~~iA~~lgiP~v~~~~~~~~~~~~~~~~~~ 190 (518)
.. ..........+.+++++++||+|++ |....++..+|.++|||++.+...
T Consensus 74 ----------~~----~~~~~~~~~~l~~~l~~~kPD~Vlv~gd~~~~~aalaA~~~~IPv~h~eag------------- 126 (385)
T 4hwg_A 74 ----------NT----AKSIGLVIEKVDEVLEKEKPDAVLFYGDTNSCLSAIAAKRRKIPIFHMEAG------------- 126 (385)
T ss_dssp ----------CS----HHHHHHHHHHHHHHHHHHCCSEEEEESCSGGGGGHHHHHHTTCCEEEESCC-------------
T ss_pred ----------CH----HHHHHHHHHHHHHHHHhcCCcEEEEECCchHHHHHHHHHHhCCCEEEEeCC-------------
Confidence 11 1222234557788888899999986 333334478999999997654221
Q ss_pred cCCCCCCCCCCCccccCCCCCCccccCCCCCcccccCCCCchHHHHHHHhhhhcccccEEEEcCccccchHHHHHHHH-h
Q 010093 191 YEPHKKVSSDSEPFVMPHFPGEIKLTRNQLPDFVKQDMGDNDFSRLLKAIDDSDLRSYGVAVNSFYELEPAYADHYRK-A 269 (518)
Q Consensus 191 ~~~~~~~~~~~~~~~~p~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ns~~~L~~~~~~~~~~-~ 269 (518)
+.. .. +.+|.. ..+....+ -++.+++.+- .....+.. .
T Consensus 127 ------------------lrs---~~-~~~pee--------~nR~~~~~------~a~~~~~~te-----~~~~~l~~~G 165 (385)
T 4hwg_A 127 ------------------NRC---FD-QRVPEE--------INRKIIDH------ISDVNITLTE-----HARRYLIAEG 165 (385)
T ss_dssp ------------------CCC---SC-TTSTHH--------HHHHHHHH------HCSEEEESSH-----HHHHHHHHTT
T ss_pred ------------------Ccc---cc-ccCcHH--------HHHHHHHh------hhceeecCCH-----HHHHHHHHcC
Confidence 100 00 001110 01111111 1233333321 11122221 2
Q ss_pred h-CCcEEEeC-ccccCCcCchhhhhcCCCCCcChhHHhHhhhcCCCCcEEEEecCCcccCC-HHHHHHHHHHHHhC----
Q 010093 270 L-GRRAWHIG-PVSLCNRNFEDKALRGKQASIDELECLKWLNSKQPYSVVYVCFGSLANFT-SAQLMEIATGLEAS---- 342 (518)
Q Consensus 270 ~-~~~v~~vG-pl~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~vIyvslGS~~~~~-~~~~~~l~~al~~~---- 342 (518)
. +.+++.+| |........... ....++.+-++-. +++.|+++.|...... .+.+..+++++..+
T Consensus 166 ~~~~~I~vtGnp~~D~~~~~~~~--------~~~~~~~~~lgl~-~~~~iLvt~hr~e~~~~~~~l~~ll~al~~l~~~~ 236 (385)
T 4hwg_A 166 LPAELTFKSGSHMPEVLDRFMPK--------ILKSDILDKLSLT-PKQYFLISSHREENVDVKNNLKELLNSLQMLIKEY 236 (385)
T ss_dssp CCGGGEEECCCSHHHHHHHHHHH--------HHHCCHHHHTTCC-TTSEEEEEECCC-----CHHHHHHHHHHHHHHHHH
T ss_pred CCcCcEEEECCchHHHHHHhhhh--------cchhHHHHHcCCC-cCCEEEEEeCCchhcCcHHHHHHHHHHHHHHHhcC
Confidence 2 24688899 432211000000 0011222223222 3558888888754332 35566777777654
Q ss_pred CCcEEEEEcCCCCCCCCCCCCCCChhHHHHH---h-cCCCcEeecCccH---HHhhccCCCcccccccCchhHHHHHHhC
Q 010093 343 GRNFIWVVSKNKNDGGEGGNEDWLPEGFEKR---M-EGKGLIIRGWAPQ---VLILDHEAVGGFVTHCGWNSTLEAVAAG 415 (518)
Q Consensus 343 ~~~~i~~~~~~~~~~~~~~~~~~lp~~~~~~---~-~~~nv~~~~~~pq---~~lL~~~~~~~~ItHgG~~s~~eal~~G 415 (518)
+..+|+..... +-+..... . ..+|+++.+.+++ ..+++.+++ +|+-.|. .+.||.++|
T Consensus 237 ~~~vv~p~~p~------------~~~~l~~~~~~~~~~~~v~l~~~lg~~~~~~l~~~adl--vvt~SGg-v~~EA~alG 301 (385)
T 4hwg_A 237 NFLIIFSTHPR------------TKKRLEDLEGFKELGDKIRFLPAFSFTDYVKLQMNAFC--ILSDSGT-ITEEASILN 301 (385)
T ss_dssp CCEEEEEECHH------------HHHHHHTSGGGGGTGGGEEECCCCCHHHHHHHHHHCSE--EEECCTT-HHHHHHHTT
T ss_pred CeEEEEECChH------------HHHHHHHHHHHhcCCCCEEEEcCCCHHHHHHHHHhCcE--EEECCcc-HHHHHHHcC
Confidence 56777765321 11111111 1 1358888766654 568877555 9988775 468999999
Q ss_pred CceecCCcccccchhHHHHHHhhhcceeeccccccccccCccChHHHHHHHHHHhc
Q 010093 416 VPLVTWPVAAEQFYNEKMVNEILKIGVGVGIQKWCRIVGDFVKRETIEKAVNEIMV 471 (518)
Q Consensus 416 vP~l~~P~~~DQ~~na~~v~e~~G~G~~l~~~~~~~~~~~~~~~~~l~~av~~ll~ 471 (518)
+|+|.++-..+.+. .+ +.|.++.+ ..++++|.+++.++|+
T Consensus 302 ~Pvv~~~~~ter~e---~v--~~G~~~lv-----------~~d~~~i~~ai~~ll~ 341 (385)
T 4hwg_A 302 LPALNIREAHERPE---GM--DAGTLIMS-----------GFKAERVLQAVKTITE 341 (385)
T ss_dssp CCEEECSSSCSCTH---HH--HHTCCEEC-----------CSSHHHHHHHHHHHHT
T ss_pred CCEEEcCCCccchh---hh--hcCceEEc-----------CCCHHHHHHHHHHHHh
Confidence 99999987544221 23 56877655 2478999999999997
No 40
>3s28_A Sucrose synthase 1; glycosyltransferase, sucrose metabolism, sugar donar complex rossmann fold, GT-B fold, glycosyltansferase, UDP-glucose; HET: UDP LCN NHF; 2.80A {Arabidopsis thaliana} PDB: 3s27_A* 3s29_A*
Probab=98.74 E-value=8.3e-07 Score=96.19 Aligned_cols=167 Identities=9% Similarity=0.026 Sum_probs=95.6
Q ss_pred EEEEecCCcccCCHHHHHHHHHHHHhCC-----CcEEEEEcCCCCCCCCCCCCC-C--ChhHHHH---H-hcCCCcEeec
Q 010093 316 VVYVCFGSLANFTSAQLMEIATGLEASG-----RNFIWVVSKNKNDGGEGGNED-W--LPEGFEK---R-MEGKGLIIRG 383 (518)
Q Consensus 316 vIyvslGS~~~~~~~~~~~l~~al~~~~-----~~~i~~~~~~~~~~~~~~~~~-~--lp~~~~~---~-~~~~nv~~~~ 383 (518)
.+++..|.+. ..+.+..+++|++.+. .+++++-++.. ...... . .-+.+.. + ...++|.+.+
T Consensus 573 ~vIl~vGRl~--~~KGid~LIeA~~~L~~~~~~v~LvIvG~g~~----~~~~~~e~~~~~~~L~~li~~lgL~~~V~flG 646 (816)
T 3s28_A 573 PILFTMARLD--RVKNLSGLVEWYGKNTRLRELANLVVVGGDRR----KESKDNEEKAEMKKMYDLIEEYKLNGQFRWIS 646 (816)
T ss_dssp CEEEEECCCC--TTTTHHHHHHHHHHCHHHHHHCEEEEECCCTT----SCCCCHHHHHHHHHHHHHHHHTTCBBBEEEEC
T ss_pred eEEEEEccCc--ccCCHHHHHHHHHHHHhhCCCeEEEEEeCCCc----ccccchhhHHHHHHHHHHHHHcCCCCcEEEcc
Confidence 5667778765 4666777888887763 34444433220 000000 0 0011111 1 1246888887
Q ss_pred C----ccHHHhhc----cCCCccccc----ccCchhHHHHHHhCCceecCCcccccchhHHHHHHhhhcceeeccccccc
Q 010093 384 W----APQVLILD----HEAVGGFVT----HCGWNSTLEAVAAGVPLVTWPVAAEQFYNEKMVNEILKIGVGVGIQKWCR 451 (518)
Q Consensus 384 ~----~pq~~lL~----~~~~~~~It----HgG~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~e~~G~G~~l~~~~~~~ 451 (518)
+ +|+.++.. .+++ ||. -|-..++.||+++|+|+|+. |.......+ +.-+.|..++.
T Consensus 647 ~~~~~v~~~eL~~~~~~aaDv--fV~PS~~EgfglvllEAMA~G~PVIas----d~GG~~EiV-~dg~~Gllv~p----- 714 (816)
T 3s28_A 647 SQMDRVRNGELYRYICDTKGA--FVQPALYEAFGLTVVEAMTCGLPTFAT----CKGGPAEII-VHGKSGFHIDP----- 714 (816)
T ss_dssp CCCCHHHHHHHHHHHHHTTCE--EEECCSCBSSCHHHHHHHHTTCCEEEE----SSBTHHHHC-CBTTTBEEECT-----
T ss_pred CccccCCHHHHHHHHHhcCeE--EEECCCccCccHHHHHHHHcCCCEEEe----CCCChHHHH-ccCCcEEEeCC-----
Confidence 4 44555554 2233 552 23356999999999999995 444555555 45567888865
Q ss_pred cccCccChHHHHHHHHHHh----cCChHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHH
Q 010093 452 IVGDFVKRETIEKAVNEIM----VGDRAEEMRSRAKALGKMAKRAVENGGSSYSDLSALIEELR 511 (518)
Q Consensus 452 ~~~~~~~~~~l~~av~~ll----~~~~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~~~ 511 (518)
.+++++.++|.+++ . |+..+ +++++..++.+.+..+-...++++++-..
T Consensus 715 -----~D~e~LA~aI~~lL~~Ll~---d~~~~---~~m~~~ar~~a~~~fSwe~~a~~ll~lY~ 767 (816)
T 3s28_A 715 -----YHGDQAADTLADFFTKCKE---DPSHW---DEISKGGLQRIEEKYTWQIYSQRLLTLTG 767 (816)
T ss_dssp -----TSHHHHHHHHHHHHHHHHH---CTHHH---HHHHHHHHHHHHHSCCHHHHHHHHHHHHH
T ss_pred -----CCHHHHHHHHHHHHHHhcc---CHHHH---HHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Confidence 38889999997776 5 33333 33444444444556776666666666444
No 41
>1rzu_A Glycogen synthase 1; glycosyl-transferase, GT-B fold, rossmann fold, ADP-binding, transferase; HET: ADP; 2.30A {Agrobacterium tumefaciens} SCOP: c.87.1.8 PDB: 1rzv_A
Probab=98.65 E-value=6.5e-06 Score=84.85 Aligned_cols=158 Identities=11% Similarity=0.038 Sum_probs=92.9
Q ss_pred EEEEecCCcccCCHHHHHHHHHHHHhC---CCcEEEEEcCCCCCCCCCCCCCCChhHHHHH--hcCCCcE-eecCccH--
Q 010093 316 VVYVCFGSLANFTSAQLMEIATGLEAS---GRNFIWVVSKNKNDGGEGGNEDWLPEGFEKR--MEGKGLI-IRGWAPQ-- 387 (518)
Q Consensus 316 vIyvslGS~~~~~~~~~~~l~~al~~~---~~~~i~~~~~~~~~~~~~~~~~~lp~~~~~~--~~~~nv~-~~~~~pq-- 387 (518)
.+++..|.+. ..+.+..++++++.+ +.++++.-.+.. . +-+.+... ..++|+. +.++...
T Consensus 292 ~~i~~vGrl~--~~Kg~~~li~a~~~l~~~~~~l~ivG~g~~------~----~~~~l~~~~~~~~~~v~~~~g~~~~~~ 359 (485)
T 1rzu_A 292 PLFCVISRLT--WQKGIDLMAEAVDEIVSLGGRLVVLGAGDV------A----LEGALLAAASRHHGRVGVAIGYNEPLS 359 (485)
T ss_dssp CEEEEESCBS--TTTTHHHHHTTHHHHHHTTCEEEEEECBCH------H----HHHHHHHHHHHTTTTEEEEESCCHHHH
T ss_pred eEEEEEccCc--cccCHHHHHHHHHHHHhcCceEEEEeCCch------H----HHHHHHHHHHhCCCcEEEecCCCHHHH
Confidence 4667788875 344555566666544 566655533311 0 11222221 1246887 6788333
Q ss_pred HHhhccCCCccccc----ccCchhHHHHHHhCCceecCCcccccchhHHHHHHhh---------hcceeecccccccccc
Q 010093 388 VLILDHEAVGGFVT----HCGWNSTLEAVAAGVPLVTWPVAAEQFYNEKMVNEIL---------KIGVGVGIQKWCRIVG 454 (518)
Q Consensus 388 ~~lL~~~~~~~~It----HgG~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~e~~---------G~G~~l~~~~~~~~~~ 454 (518)
..++..+++ +|. -|...++.||+++|+|+|+... ......+ +.. +.|..++.
T Consensus 360 ~~~~~~adv--~v~pS~~E~~~~~~lEAma~G~PvI~s~~----gg~~e~v-~~~~~~~~~~~~~~G~l~~~-------- 424 (485)
T 1rzu_A 360 HLMQAGCDA--IIIPSRFEPCGLTQLYALRYGCIPVVART----GGLADTV-IDANHAALASKAATGVQFSP-------- 424 (485)
T ss_dssp HHHHHHCSE--EEECCSCCSSCSHHHHHHHHTCEEEEESS----HHHHHHC-CBCCHHHHHTTCCCBEEESS--------
T ss_pred HHHHhcCCE--EEECcccCCCCHHHHHHHHCCCCEEEeCC----CChhhee-cccccccccccCCcceEeCC--------
Confidence 257877665 652 2445689999999999999764 2344444 232 57777754
Q ss_pred CccChHHHHHHHHHHh---cCChHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHH
Q 010093 455 DFVKRETIEKAVNEIM---VGDRAEEMRSRAKALGKMAKRAVENGGSSYSDLSALIEELR 511 (518)
Q Consensus 455 ~~~~~~~l~~av~~ll---~~~~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~~~ 511 (518)
.++++|.++|.+++ + ++..++ ++++..+ ++..+-+..++++++..+
T Consensus 425 --~d~~~la~~i~~ll~~~~---~~~~~~---~~~~~~~---~~~fs~~~~~~~~~~~y~ 473 (485)
T 1rzu_A 425 --VTLDGLKQAIRRTVRYYH---DPKLWT---QMQKLGM---KSDVSWEKSAGLYAALYS 473 (485)
T ss_dssp --CSHHHHHHHHHHHHHHHT---CHHHHH---HHHHHHH---TCCCBHHHHHHHHHHHHH
T ss_pred --CCHHHHHHHHHHHHHHhC---CHHHHH---HHHHHHH---HHhCChHHHHHHHHHHHH
Confidence 48899999999999 5 444333 3333333 456666665566555544
No 42
>2qzs_A Glycogen synthase; glycosyl-transferase, GT-B fold, rossmann fold, closed-form, ADP and glucose binding, glycogen biosynthesis; HET: GLC ADP 250; 2.20A {Escherichia coli} PDB: 2r4t_A* 2r4u_A* 3guh_A* 3cx4_A* 3cop_A* 3d1j_A
Probab=98.61 E-value=3.1e-06 Score=87.23 Aligned_cols=160 Identities=12% Similarity=-0.004 Sum_probs=94.9
Q ss_pred EEEEecCCcccCCHHHHHHHHHHHHhC---CCcEEEEEcCCCCCCCCCCCCCCChhHHHHH--hcCCCcE-eecCccH--
Q 010093 316 VVYVCFGSLANFTSAQLMEIATGLEAS---GRNFIWVVSKNKNDGGEGGNEDWLPEGFEKR--MEGKGLI-IRGWAPQ-- 387 (518)
Q Consensus 316 vIyvslGS~~~~~~~~~~~l~~al~~~---~~~~i~~~~~~~~~~~~~~~~~~lp~~~~~~--~~~~nv~-~~~~~pq-- 387 (518)
.+++..|.+. ..+.+..++++++.+ +.+++++-.+.. . +-+.+... ..++++. +.++...
T Consensus 293 ~~i~~vGrl~--~~Kg~~~li~a~~~l~~~~~~l~ivG~g~~------~----~~~~l~~~~~~~~~~v~~~~g~~~~~~ 360 (485)
T 2qzs_A 293 PLFAVVSRLT--SQKGLDLVLEALPGLLEQGGQLALLGAGDP------V----LQEGFLAAAAEYPGQVGVQIGYHEAFS 360 (485)
T ss_dssp CEEEEEEEES--GGGCHHHHHHHHHHHHHTTCEEEEEEEECH------H----HHHHHHHHHHHSTTTEEEEESCCHHHH
T ss_pred eEEEEeccCc--cccCHHHHHHHHHHHhhCCcEEEEEeCCch------H----HHHHHHHHHHhCCCcEEEeCCCCHHHH
Confidence 5556667764 345566666666654 566655543321 0 11222221 1236886 7788433
Q ss_pred HHhhccCCCccccc----ccCchhHHHHHHhCCceecCCcccccchhHHHHHHhh---------hcceeecccccccccc
Q 010093 388 VLILDHEAVGGFVT----HCGWNSTLEAVAAGVPLVTWPVAAEQFYNEKMVNEIL---------KIGVGVGIQKWCRIVG 454 (518)
Q Consensus 388 ~~lL~~~~~~~~It----HgG~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~e~~---------G~G~~l~~~~~~~~~~ 454 (518)
..++..+++ +|. -|...++.||+++|+|+|+... ......+ +.. +.|..+..
T Consensus 361 ~~~~~~adv--~v~pS~~E~~g~~~lEAma~G~PvI~s~~----gg~~e~v-~~~~~~~~~~~~~~G~l~~~-------- 425 (485)
T 2qzs_A 361 HRIMGGADV--ILVPSRFEPCGLTQLYGLKYGTLPLVRRT----GGLADTV-SDCSLENLADGVASGFVFED-------- 425 (485)
T ss_dssp HHHHHHCSE--EEECCSCCSSCSHHHHHHHHTCEEEEESS----HHHHHHC-CBCCHHHHHTTCCCBEEECS--------
T ss_pred HHHHHhCCE--EEECCccCCCcHHHHHHHHCCCCEEECCC----CCcccee-ccCccccccccccceEEECC--------
Confidence 357877666 552 2345688999999999998754 2344444 232 57777754
Q ss_pred CccChHHHHHHHHHHh---cCChHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHhh
Q 010093 455 DFVKRETIEKAVNEIM---VGDRAEEMRSRAKALGKMAKRAVENGGSSYSDLSALIEELRLS 513 (518)
Q Consensus 455 ~~~~~~~l~~av~~ll---~~~~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 513 (518)
.++++|.++|.+++ . ++..++ ++++..+ ++..+-...++++++..+..
T Consensus 426 --~d~~~la~~i~~ll~~~~---~~~~~~---~~~~~~~---~~~fs~~~~~~~~~~ly~~~ 476 (485)
T 2qzs_A 426 --SNAWSLLRAIRRAFVLWS---RPSLWR---FVQRQAM---AMDFSWQVAAKSYRELYYRL 476 (485)
T ss_dssp --SSHHHHHHHHHHHHHHHT---SHHHHH---HHHHHHH---HCCCCHHHHHHHHHHHHHHH
T ss_pred --CCHHHHHHHHHHHHHHcC---CHHHHH---HHHHHHH---hhcCCHHHHHHHHHHHHHHh
Confidence 48999999999999 5 444433 3333333 46677666666666655543
No 43
>3oy2_A Glycosyltransferase B736L; rossmann fold, GDP-mannose, sugar, VIRU proteins, viral protein,transferase; 2.31A {Paramecium bursaria chlorella virus NY} PDB: 3oy7_A*
Probab=98.60 E-value=1.6e-05 Score=80.02 Aligned_cols=166 Identities=15% Similarity=0.107 Sum_probs=96.8
Q ss_pred cEEEEecCCcccCCHHHHHHHHHHHHhC-----CCcEEEEEcCCCCCCCCCCCCCCChhHHHH---Hh-cCCC-------
Q 010093 315 SVVYVCFGSLANFTSAQLMEIATGLEAS-----GRNFIWVVSKNKNDGGEGGNEDWLPEGFEK---RM-EGKG------- 378 (518)
Q Consensus 315 ~vIyvslGS~~~~~~~~~~~l~~al~~~-----~~~~i~~~~~~~~~~~~~~~~~~lp~~~~~---~~-~~~n------- 378 (518)
..+++..|.+. ..+.+..++++++.+ +.++++.-.+.. . ...+ +-+.+.. +. ..++
T Consensus 184 ~~~il~vGr~~--~~Kg~~~li~a~~~l~~~~~~~~l~ivG~g~~----~-~~~~-l~~~~~~~~~~~~l~~~v~~l~~v 255 (413)
T 3oy2_A 184 DVLFLNMNRNT--ARKRLDIYVLAAARFISKYPDAKVRFLCNSHH----E-SKFD-LHSIALRELVASGVDNVFTHLNKI 255 (413)
T ss_dssp SEEEECCSCSS--GGGTHHHHHHHHHHHHHHCTTCCEEEEEECCT----T-CSCC-HHHHHHHHHHHHTCSCHHHHHTTE
T ss_pred ceEEEEcCCCc--hhcCcHHHHHHHHHHHHhCCCcEEEEEeCCcc----c-chhh-HHHHHHHHHHHcCcccccccccce
Confidence 36777888854 345566666666653 456666544432 0 1000 1122222 12 1232
Q ss_pred cEeecCccHH---HhhccCCCccccc----ccCchhHHHHHHhCCceecCCcccccchhHHHHHHhhhc-----------
Q 010093 379 LIIRGWAPQV---LILDHEAVGGFVT----HCGWNSTLEAVAAGVPLVTWPVAAEQFYNEKMVNEILKI----------- 440 (518)
Q Consensus 379 v~~~~~~pq~---~lL~~~~~~~~It----HgG~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~e~~G~----------- 440 (518)
+.+.+|+|+. .++..+++ +|. -|...++.||+++|+|+|+... ......+ ..|.
T Consensus 256 v~~~g~~~~~~~~~~~~~adv--~v~pS~~E~~~~~~lEAma~G~PvI~s~~----~g~~e~v--~~~~~~~i~~~~~~~ 327 (413)
T 3oy2_A 256 MINRTVLTDERVDMMYNACDV--IVNCSSGEGFGLCSAEGAVLGKPLIISAV----GGADDYF--SGDCVYKIKPSAWIS 327 (413)
T ss_dssp EEECSCCCHHHHHHHHHHCSE--EEECCSCCSSCHHHHHHHTTTCCEEEECC----HHHHHHS--CTTTSEEECCCEEEE
T ss_pred eeccCcCCHHHHHHHHHhCCE--EEeCCCcCCCCcHHHHHHHcCCCEEEcCC----CChHHHH--ccCcccccccccccc
Confidence 7777999854 46766665 552 2334689999999999998653 2333333 2233
Q ss_pred -----ce--eeccccccccccCccChHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHhh
Q 010093 441 -----GV--GVGIQKWCRIVGDFVKRETIEKAVNEIMVGDRAEEMRSRAKALGKMAKRAVENGGSSYSDLSALIEELRLS 513 (518)
Q Consensus 441 -----G~--~l~~~~~~~~~~~~~~~~~l~~av~~ll~~~~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 513 (518)
|. .+.. .+.+++.++| ++++ ++..++ ++++..++.+.+..+-+..++++.+.+++.
T Consensus 328 ~~~~~G~~gl~~~----------~d~~~la~~i-~l~~---~~~~~~---~~~~~a~~~~~~~fs~~~~~~~~~~~~~~~ 390 (413)
T 3oy2_A 328 VDDRDGIGGIEGI----------IDVDDLVEAF-TFFK---DEKNRK---EYGKRVQDFVKTKPTWDDISSDIIDFFNSL 390 (413)
T ss_dssp CTTTCSSCCEEEE----------CCHHHHHHHH-HHTT---SHHHHH---HHHHHHHHHHTTSCCHHHHHHHHHHHHHHH
T ss_pred cccccCcceeeCC----------CCHHHHHHHH-HHhc---CHHHHH---HHHHHHHHHHHHhCCHHHHHHHHHHHHHHH
Confidence 44 4432 4899999999 9997 545443 444444444456677777777776666644
No 44
>2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A*
Probab=98.49 E-value=9.9e-05 Score=77.55 Aligned_cols=115 Identities=11% Similarity=0.017 Sum_probs=74.1
Q ss_pred CCcEeecCccHH---HhhccCCCcccc---cccCchhHHHHHHhCCceecCCcccccchh-HHHHHHhhhcceeeccccc
Q 010093 377 KGLIIRGWAPQV---LILDHEAVGGFV---THCGWNSTLEAVAAGVPLVTWPVAAEQFYN-EKMVNEILKIGVGVGIQKW 449 (518)
Q Consensus 377 ~nv~~~~~~pq~---~lL~~~~~~~~I---tHgG~~s~~eal~~GvP~l~~P~~~DQ~~n-a~~v~e~~G~G~~l~~~~~ 449 (518)
++|++.+++|+. .++..+++ || ..|+.+++.||+++|+|+|++|...=.... +..+ +..|+...+
T Consensus 434 ~~v~~~g~~~~~~~~~~~~~adv--~v~ps~~~~g~~~lEAma~G~Pvv~~~g~~~~s~~~~~~l-~~~g~~e~v----- 505 (568)
T 2vsy_A 434 QRLVFMPKLPHPQYLARYRHADL--FLDTHPYNAHTTASDALWTGCPVLTTPGETFAARVAGSLN-HHLGLDEMN----- 505 (568)
T ss_dssp GGEEEECCCCHHHHHHHGGGCSE--EECCSSSCCSHHHHHHHHTTCCEEBCCCSSGGGSHHHHHH-HHHTCGGGB-----
T ss_pred hHEEeeCCCCHHHHHHHHhcCCE--EeeCCCCCCcHHHHHHHhCCCCEEeccCCCchHHHHHHHH-HHCCChhhh-----
Confidence 689999999854 45766655 55 226678999999999999998743111112 3445 466666554
Q ss_pred cccccCccChHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHH--hcCCCcHHHHHHHHHHHH
Q 010093 450 CRIVGDFVKRETIEKAVNEIMVGDRAEEMRSRAKALGKMAKRAV--ENGGSSYSDLSALIEELR 511 (518)
Q Consensus 450 ~~~~~~~~~~~~l~~av~~ll~~~~~~~~~~~a~~l~~~~~~~~--~~~g~~~~~~~~~~~~~~ 511 (518)
..+++++.+++.++++ |+..++ ++++..++.+ .+..+.....+.+.+.+.
T Consensus 506 ------~~~~~~la~~i~~l~~---~~~~~~---~~~~~~~~~~~~~~~f~~~~~~~~~~~~y~ 557 (568)
T 2vsy_A 506 ------VADDAAFVAKAVALAS---DPAALT---ALHARVDVLRRASGVFHMDGFADDFGALLQ 557 (568)
T ss_dssp ------CSSHHHHHHHHHHHHH---CHHHHH---HHHHHHHHHHHHSSTTCHHHHHHHHHHHHH
T ss_pred ------cCCHHHHHHHHHHHhc---CHHHHH---HHHHHHHHhhhcCCCCCHHHHHHHHHHHHH
Confidence 2388999999999997 555444 3444444333 455665555555554444
No 45
>2f9f_A First mannosyl transferase (WBAZ-1); alpha-beta protein, structural genomics, PSI, protein struct initiative; 1.80A {Archaeoglobus fulgidus} SCOP: c.87.1.8
Probab=98.30 E-value=2.5e-06 Score=75.19 Aligned_cols=140 Identities=9% Similarity=0.011 Sum_probs=90.0
Q ss_pred EEEEecCCcccCCHHHHHHHHHHHHhCC-CcEEEEEcCCCCCCCCCCCCCCChhHHH--HHhcCCCcEeecCccH---HH
Q 010093 316 VVYVCFGSLANFTSAQLMEIATGLEASG-RNFIWVVSKNKNDGGEGGNEDWLPEGFE--KRMEGKGLIIRGWAPQ---VL 389 (518)
Q Consensus 316 vIyvslGS~~~~~~~~~~~l~~al~~~~-~~~i~~~~~~~~~~~~~~~~~~lp~~~~--~~~~~~nv~~~~~~pq---~~ 389 (518)
.+++..|++. ..+.+..++++++.++ .++++. +.+. ..+. +-+-.. .....+|+.+.+|+|+ ..
T Consensus 24 ~~i~~~G~~~--~~Kg~~~li~a~~~l~~~~l~i~-G~~~---~~~~----l~~~~~~~~~~l~~~v~~~g~~~~~e~~~ 93 (177)
T 2f9f_A 24 DFWLSVNRIY--PEKRIELQLEVFKKLQDEKLYIV-GWFS---KGDH----AERYARKIMKIAPDNVKFLGSVSEEELID 93 (177)
T ss_dssp SCEEEECCSS--GGGTHHHHHHHHHHCTTSCEEEE-BCCC---TTST----HHHHHHHHHHHSCTTEEEEESCCHHHHHH
T ss_pred CEEEEEeccc--cccCHHHHHHHHHhCCCcEEEEE-ecCc---cHHH----HHHHHHhhhcccCCcEEEeCCCCHHHHHH
Confidence 3456677765 3566778888988874 455554 4333 1111 211111 1223569999999997 56
Q ss_pred hhccCCCccccc---ccC-chhHHHHHHhCCceecCCcccccchhHHHHHHhhhcceeeccccccccccCccChHHHHHH
Q 010093 390 ILDHEAVGGFVT---HCG-WNSTLEAVAAGVPLVTWPVAAEQFYNEKMVNEILKIGVGVGIQKWCRIVGDFVKRETIEKA 465 (518)
Q Consensus 390 lL~~~~~~~~It---HgG-~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~e~~G~G~~l~~~~~~~~~~~~~~~~~l~~a 465 (518)
++..+++ +|. +.| ..++.||+++|+|+|+... ..+...+ +..+.|..+ . .+.+++.++
T Consensus 94 ~~~~adi--~v~ps~~e~~~~~~~Eama~G~PvI~~~~----~~~~e~i-~~~~~g~~~-~----------~d~~~l~~~ 155 (177)
T 2f9f_A 94 LYSRCKG--LLCTAKDEDFGLTPIEAMASGKPVIAVNE----GGFKETV-INEKTGYLV-N----------ADVNEIIDA 155 (177)
T ss_dssp HHHHCSE--EEECCSSCCSCHHHHHHHHTTCCEEEESS----HHHHHHC-CBTTTEEEE-C----------SCHHHHHHH
T ss_pred HHHhCCE--EEeCCCcCCCChHHHHHHHcCCcEEEeCC----CCHHHHh-cCCCccEEe-C----------CCHHHHHHH
Confidence 7877666 665 334 4599999999999998753 4455555 455678777 4 378999999
Q ss_pred HHHHhcCChHHHH-HHHHHHHH
Q 010093 466 VNEIMVGDRAEEM-RSRAKALG 486 (518)
Q Consensus 466 v~~ll~~~~~~~~-~~~a~~l~ 486 (518)
|.++++ ++.. ++++++.+
T Consensus 156 i~~l~~---~~~~~~~~~~~~a 174 (177)
T 2f9f_A 156 MKKVSK---NPDKFKKDCFRRA 174 (177)
T ss_dssp HHHHHH---CTTTTHHHHHHHH
T ss_pred HHHHHh---CHHHHHHHHHHHH
Confidence 999997 3333 44444433
No 46
>2hy7_A Glucuronosyltransferase GUMK; glycosyltransferases, xanthan, membrane-associated proteins; 1.90A {Xanthomonas campestris} PDB: 2q6v_A* 3cv3_A* 3cuy_A*
Probab=98.21 E-value=0.00022 Score=71.51 Aligned_cols=73 Identities=12% Similarity=0.008 Sum_probs=54.7
Q ss_pred CCCcEeecCccHH---HhhccCCCccccc---ccC-chhHHHHH-------HhCCceecCCcccccchhHHHHHHhhhcc
Q 010093 376 GKGLIIRGWAPQV---LILDHEAVGGFVT---HCG-WNSTLEAV-------AAGVPLVTWPVAAEQFYNEKMVNEILKIG 441 (518)
Q Consensus 376 ~~nv~~~~~~pq~---~lL~~~~~~~~It---HgG-~~s~~eal-------~~GvP~l~~P~~~DQ~~na~~v~e~~G~G 441 (518)
.+||.+.+++|+. .++..+++ +|. +-| .+++.||+ ++|+|+|+... + +.-..|
T Consensus 264 ~~~V~f~G~~~~~~l~~~~~~adv--~v~ps~~E~~~~~~lEAm~Kl~eYla~G~PVIas~~----------v-~~~~~G 330 (406)
T 2hy7_A 264 GDNVIVYGEMKHAQTIGYIKHARF--GIAPYASEQVPVYLADSSMKLLQYDFFGLPAVCPNA----------V-VGPYKS 330 (406)
T ss_dssp CTTEEEECCCCHHHHHHHHHTCSE--EECCBSCSCCCTTHHHHCHHHHHHHHHTCCEEEEGG----------G-TCSCSS
T ss_pred CCCEEEcCCCCHHHHHHHHHhcCE--EEECCCcccCchHHHHHHHHHHHHhhCCCcEEEehh----------c-ccCcce
Confidence 4599999999865 46766665 542 334 46789999 99999999765 5 344557
Q ss_pred ee-eccccccccccCccChHHHHHHHHHHhc
Q 010093 442 VG-VGIQKWCRIVGDFVKRETIEKAVNEIMV 471 (518)
Q Consensus 442 ~~-l~~~~~~~~~~~~~~~~~l~~av~~ll~ 471 (518)
.. +.. -++++|.++|.++++
T Consensus 331 ~l~v~~----------~d~~~la~ai~~ll~ 351 (406)
T 2hy7_A 331 RFGYTP----------GNADSVIAAITQALE 351 (406)
T ss_dssp EEEECT----------TCHHHHHHHHHHHHH
T ss_pred EEEeCC----------CCHHHHHHHHHHHHh
Confidence 76 654 489999999999997
No 47
>2xci_A KDO-transferase, 3-deoxy-D-manno-2-octulosonic acid transferase; KDTA, GSEA, glycosyltransferase superfamily B,; HET: PG4; 2.00A {Aquifex aeolicus} PDB: 2xcu_A*
Probab=98.09 E-value=0.0007 Score=67.07 Aligned_cols=96 Identities=11% Similarity=0.167 Sum_probs=62.6
Q ss_pred CcEeecCcc-HHHhhccCCCccccc---c--cCchhHHHHHHhCCceecCCcccccchhHHHHHHhhhcceeeccccccc
Q 010093 378 GLIIRGWAP-QVLILDHEAVGGFVT---H--CGWNSTLEAVAAGVPLVTWPVAAEQFYNEKMVNEILKIGVGVGIQKWCR 451 (518)
Q Consensus 378 nv~~~~~~p-q~~lL~~~~~~~~It---H--gG~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~e~~G~G~~l~~~~~~~ 451 (518)
++++.++.. -..+++.+++ ++. . +|..++.||+++|+|+|+-|..++.......+ ...|.++..
T Consensus 261 ~v~~~~~~~dl~~~y~~aDv--~vl~ss~~e~gg~~~lEAmA~G~PVI~~~~~~~~~e~~~~~-~~~G~l~~~------- 330 (374)
T 2xci_A 261 DVILVDRFGILKELYPVGKI--AIVGGTFVNIGGHNLLEPTCWGIPVIYGPYTHKVNDLKEFL-EKEGAGFEV------- 330 (374)
T ss_dssp SEEECCSSSCHHHHGGGEEE--EEECSSSSSSCCCCCHHHHTTTCCEEECSCCTTSHHHHHHH-HHTTCEEEC-------
T ss_pred cEEEECCHHHHHHHHHhCCE--EEECCcccCCCCcCHHHHHHhCCCEEECCCccChHHHHHHH-HHCCCEEEe-------
Confidence 466656544 3667877655 443 1 34578999999999999877777766666655 355655543
Q ss_pred cccCccChHHHHHHHHHHhcCChHHHHHHHHHHHHHH
Q 010093 452 IVGDFVKRETIEKAVNEIMVGDRAEEMRSRAKALGKM 488 (518)
Q Consensus 452 ~~~~~~~~~~l~~av~~ll~~~~~~~~~~~a~~l~~~ 488 (518)
-++++|.+++.++++++....+.+++++..+.
T Consensus 331 -----~d~~~La~ai~~ll~d~~r~~mg~~ar~~~~~ 362 (374)
T 2xci_A 331 -----KNETELVTKLTELLSVKKEIKVEEKSREIKGC 362 (374)
T ss_dssp -----CSHHHHHHHHHHHHHSCCCCCHHHHHHHHHHH
T ss_pred -----CCHHHHHHHHHHHHhHHHHHHHHHHHHHHHHh
Confidence 26789999999999721113455555555444
No 48
>2x0d_A WSAF; GT4 family, transferase; HET: MSE; 2.28A {Geobacillus stearothermophilus} PDB: 2x0f_A* 2x0e_A*
Probab=98.08 E-value=9.7e-05 Score=74.33 Aligned_cols=85 Identities=16% Similarity=0.102 Sum_probs=55.8
Q ss_pred CCCcEeecCccHHH---hhccCCCccccc--c-cCc-hhHHHHHHhCCceecCCcccccchhHHHHHHhhhcceeecccc
Q 010093 376 GKGLIIRGWAPQVL---ILDHEAVGGFVT--H-CGW-NSTLEAVAAGVPLVTWPVAAEQFYNEKMVNEILKIGVGVGIQK 448 (518)
Q Consensus 376 ~~nv~~~~~~pq~~---lL~~~~~~~~It--H-gG~-~s~~eal~~GvP~l~~P~~~DQ~~na~~v~e~~G~G~~l~~~~ 448 (518)
.+|+.+.+++|+.+ ++..+++ ||. . =|. .++.||+++|+|+|+ -..+ ....+ +.-..|+.+..
T Consensus 294 ~~~v~f~G~~~~~~l~~~~~~adv--~v~pS~~E~~g~~~lEAmA~G~PVV~-~~~g----~~e~v-~~~~~G~lv~~-- 363 (413)
T 2x0d_A 294 GIHLNSLGKLTLEDYADLLKRSSI--GISLMISPHPSYPPLEMAHFGLRVIT-NKYE----NKDLS-NWHSNIVSLEQ-- 363 (413)
T ss_dssp TEEEEEEESCCHHHHHHHHHHCCE--EECCCSSSSCCSHHHHHHHTTCEEEE-ECBT----TBCGG-GTBTTEEEESS--
T ss_pred cCcEEEcCCCCHHHHHHHHHhCCE--EEEecCCCCCCcHHHHHHhCCCcEEE-eCCC----cchhh-hcCCCEEEeCC--
Confidence 34889999998654 6766665 553 2 133 578999999999997 3222 12233 34346777754
Q ss_pred ccccccCccChHHHHHHHHHHhcCChHHHHHHH
Q 010093 449 WCRIVGDFVKRETIEKAVNEIMVGDRAEEMRSR 481 (518)
Q Consensus 449 ~~~~~~~~~~~~~l~~av~~ll~~~~~~~~~~~ 481 (518)
.++++|.++|.++++ |+..+++
T Consensus 364 --------~d~~~la~ai~~ll~---~~~~~~~ 385 (413)
T 2x0d_A 364 --------LNPENIAETLVELCM---SFNNRDV 385 (413)
T ss_dssp --------CSHHHHHHHHHHHHH---HTC----
T ss_pred --------CCHHHHHHHHHHHHc---CHHHHHH
Confidence 489999999999998 6565555
No 49
>4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A*
Probab=97.39 E-value=0.0024 Score=68.80 Aligned_cols=125 Identities=16% Similarity=0.182 Sum_probs=85.0
Q ss_pred CCcEEEEecCCcccCCHHHHHHHHHHHHhCCCcEEEEEcCCCCCCCCCCCCCCChhHHHHH-hcCCCcEeecCccHHHhh
Q 010093 313 PYSVVYVCFGSLANFTSAQLMEIATGLEASGRNFIWVVSKNKNDGGEGGNEDWLPEGFEKR-MEGKGLIIRGWAPQVLIL 391 (518)
Q Consensus 313 ~~~vIyvslGS~~~~~~~~~~~l~~al~~~~~~~i~~~~~~~~~~~~~~~~~~lp~~~~~~-~~~~nv~~~~~~pq~~lL 391 (518)
+..+||.||......+++.+..-++-|++.+--++|...... .....+-..+... ..++.+++.+.+|..+-|
T Consensus 521 ~~~v~f~~fN~~~Ki~p~~~~~W~~IL~~vP~S~L~Ll~~~~------~~~~~l~~~~~~~gi~~~r~~f~~~~~~~~~l 594 (723)
T 4gyw_A 521 EDAIVYCNFNQLYKIDPSTLQMWANILKRVPNSVLWLLRFPA------VGEPNIQQYAQNMGLPQNRIIFSPVAPKEEHV 594 (723)
T ss_dssp TTSEEEECCSCGGGCCHHHHHHHHHHHHHCSSEEEEEEETTG------GGHHHHHHHHHHTTCCGGGEEEEECCCHHHHH
T ss_pred CCCEEEEeCCccccCCHHHHHHHHHHHHhCCCCeEEEEeCcH------HHHHHHHHHHHhcCCCcCeEEECCCCCHHHHH
Confidence 456999999999889999999999999999999999987644 1000011111111 135678888998865543
Q ss_pred c-cCCCccccc---ccCchhHHHHHHhCCceecCCc-ccccchhHHHHHHhhhcceee
Q 010093 392 D-HEAVGGFVT---HCGWNSTLEAVAAGVPLVTWPV-AAEQFYNEKMVNEILKIGVGV 444 (518)
Q Consensus 392 ~-~~~~~~~It---HgG~~s~~eal~~GvP~l~~P~-~~DQ~~na~~v~e~~G~G~~l 444 (518)
. +..+++++- .+|.+|+.|||..|||+|++|- ..=...-+..+ +.+|+...+
T Consensus 595 ~~~~~~Di~LDt~p~~g~tT~~eal~~GvPvvt~~g~~~~sR~~~s~l-~~~gl~e~i 651 (723)
T 4gyw_A 595 RRGQLADVCLDTPLCNGHTTGMDVLWAGTPMVTMPGETLASRVAASQL-TCLGCLELI 651 (723)
T ss_dssp HHGGGCSEEECCSSSCCSHHHHHHHHTTCCEEBCCCSSGGGTHHHHHH-HHHTCGGGB
T ss_pred HHhCCCeEEeCCCCcCCHHHHHHHHHcCCCEEEccCCCccHhHHHHHH-HHcCCcccc
Confidence 2 233444654 8899999999999999999993 22223334455 467776555
No 50
>3qhp_A Type 1 capsular polysaccharide biosynthesis prote (CAPJ); rossmann fold, glycosyltransferase, transferase; 1.50A {Helicobacter pylori}
Probab=97.26 E-value=0.0029 Score=54.20 Aligned_cols=125 Identities=10% Similarity=0.103 Sum_probs=75.2
Q ss_pred cEEEEecCCcccCCHHHHHHHHHHHHhCCC--cE-EEEEcCCCCCCCCCCCCCCChhHHHHHh--cCCCcEeecCccHH-
Q 010093 315 SVVYVCFGSLANFTSAQLMEIATGLEASGR--NF-IWVVSKNKNDGGEGGNEDWLPEGFEKRM--EGKGLIIRGWAPQV- 388 (518)
Q Consensus 315 ~vIyvslGS~~~~~~~~~~~l~~al~~~~~--~~-i~~~~~~~~~~~~~~~~~~lp~~~~~~~--~~~nv~~~~~~pq~- 388 (518)
+++++..|.+. ..+.+..+++++..+.. .+ ++.+|.+. ..+.+.... ...++++ +|+|+.
T Consensus 2 ~~~i~~~G~~~--~~Kg~~~li~a~~~l~~~~~~~l~i~G~g~-----------~~~~~~~~~~~~~~~v~~-g~~~~~~ 67 (166)
T 3qhp_A 2 PFKIAMVGRYS--NEKNQSVLIKAVALSKYKQDIVLLLKGKGP-----------DEKKIKLLAQKLGVKAEF-GFVNSNE 67 (166)
T ss_dssp CEEEEEESCCS--TTTTHHHHHHHHHTCTTGGGEEEEEECCST-----------THHHHHHHHHHHTCEEEC-CCCCHHH
T ss_pred ceEEEEEeccc--hhcCHHHHHHHHHHhccCCCeEEEEEeCCc-----------cHHHHHHHHHHcCCeEEE-eecCHHH
Confidence 46778888875 45667778888887642 23 23334332 112222211 1337888 999864
Q ss_pred --HhhccCCCccccc----ccCchhHHHHHHhCC-ceecCCcccccchhHHHHHHhhhcceeeccccccccccCccChHH
Q 010093 389 --LILDHEAVGGFVT----HCGWNSTLEAVAAGV-PLVTWPVAAEQFYNEKMVNEILKIGVGVGIQKWCRIVGDFVKRET 461 (518)
Q Consensus 389 --~lL~~~~~~~~It----HgG~~s~~eal~~Gv-P~l~~P~~~DQ~~na~~v~e~~G~G~~l~~~~~~~~~~~~~~~~~ 461 (518)
.++..+++ +|. -|...++.||+++|+ |+|+....+. ....+ +..+. .+. ..+.++
T Consensus 68 ~~~~~~~adv--~v~ps~~e~~~~~~~Eama~G~vPvi~~~~~~~---~~~~~-~~~~~--~~~----------~~~~~~ 129 (166)
T 3qhp_A 68 LLEILKTCTL--YVHAANVESEAIACLEAISVGIVPVIANSPLSA---TRQFA-LDERS--LFE----------PNNAKD 129 (166)
T ss_dssp HHHHHTTCSE--EEECCCSCCCCHHHHHHHHTTCCEEEECCTTCG---GGGGC-SSGGG--EEC----------TTCHHH
T ss_pred HHHHHHhCCE--EEECCcccCccHHHHHHHhcCCCcEEeeCCCCc---hhhhc-cCCce--EEc----------CCCHHH
Confidence 46766555 664 244569999999996 9999332211 11122 22222 332 358999
Q ss_pred HHHHHHHHhc
Q 010093 462 IEKAVNEIMV 471 (518)
Q Consensus 462 l~~av~~ll~ 471 (518)
+.++|.++++
T Consensus 130 l~~~i~~l~~ 139 (166)
T 3qhp_A 130 LSAKIDWWLE 139 (166)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHh
Confidence 9999999997
No 51
>3tov_A Glycosyl transferase family 9; structural genomics, PSI-BIOL protein structure initiative, midwest center for structural genomics, MCSG; 2.98A {Veillonella parvula}
Probab=97.20 E-value=0.017 Score=56.30 Aligned_cols=105 Identities=10% Similarity=0.064 Sum_probs=72.5
Q ss_pred CCcEEEEEcCCCccChHHHHHHHHHHHhC--CCeEEEEeCCCCccchhhhhhhhhccCCCeE-EEEeeCCCccCCCCCCC
Q 010093 34 PQLHVFFFPFMAHGHMIPIVDMAKLFATR--GVKASVITTPANAPYVSKSVERANELGIEMD-VKTIKFPSVEAGLPEGC 110 (518)
Q Consensus 34 ~~~kIl~~~~~~~GH~~p~l~LA~~L~~r--GH~Vt~~~~~~~~~~~~~~~~~~~~~g~~i~-~~~ip~~~~~~~l~~~~ 110 (518)
.++||+++-....|++.-+.++.+.|+++ +.+|++++.+.+.+.++.. +.|+ ++.++.. .
T Consensus 7 ~~~~iLvi~~~~lGD~i~~~P~l~~L~~~~P~a~I~~l~~~~~~~l~~~~--------p~vd~vi~~~~~--------~- 69 (349)
T 3tov_A 7 DYKRIVVTFLMHLGDVILTTPFLEVLRKAAPHSHITYVIDEKLQQVMEYN--------PNIDELIVVDKK--------G- 69 (349)
T ss_dssp TTCEEEEECCCCHHHHHTTHHHHHHHHHHCTTSEEEEEEEGGGGGGTSSC--------TTCSEEEEECCS--------S-
T ss_pred CCCEEEEEecCcccHHHHHHHHHHHHHHHCCCCEEEEEECcchhHHHhcC--------CCccEEEEeCcc--------c-
Confidence 46799999999999999999999999997 9999999999887766643 2342 4444310 0
Q ss_pred CccccccchhhhhhHHHHHHHHHhhHHHHHHHHhhCCC-CEEEecCCCccHHHHHHHcCCCeEE
Q 010093 111 ENLDAITNEVNKGLIVKFFGATMKLQEPLEQLLQEHKP-DCLVADTFFPWATDAAAKFGIPRLV 173 (518)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~~p-DlVI~D~~~~~~~~iA~~lgiP~v~ 173 (518)
. . ..+..+ -.+.+.+++.+| |++|.=....-...++...|+|..+
T Consensus 70 --~----~----~~~~~~--------~~l~~~Lr~~~y~D~vidl~~~~rs~~l~~~~~a~~ri 115 (349)
T 3tov_A 70 --R----H----NSISGL--------NEVAREINAKGKTDIVINLHPNERTSYLAWKIHAPITT 115 (349)
T ss_dssp --H----H----HHHHHH--------HHHHHHHHHHCCCCEEEECCCSHHHHHHHHHHCCSEEE
T ss_pred --c----c----ccHHHH--------HHHHHHHhhCCCCeEEEECCCChHHHHHHHHhCCCeEE
Confidence 0 0 011111 123344566789 9999665555566688889999765
No 52
>3q3e_A HMW1C-like glycosyltransferase; N-glycosylation; 2.10A {Actinobacillus pleuropneumoniae serovaorganism_taxid} PDB: 3q3h_A* 3q3i_A
Probab=97.15 E-value=0.0028 Score=65.78 Aligned_cols=146 Identities=12% Similarity=0.042 Sum_probs=90.7
Q ss_pred cEEEEecCCcccCCHHHHHHHHHHHHhCCCcEEEEE--cCCCCCCCCCCCCCCChhHHHHHhcCCCcEeecCccHHHhh-
Q 010093 315 SVVYVCFGSLANFTSAQLMEIATGLEASGRNFIWVV--SKNKNDGGEGGNEDWLPEGFEKRMEGKGLIIRGWAPQVLIL- 391 (518)
Q Consensus 315 ~vIyvslGS~~~~~~~~~~~l~~al~~~~~~~i~~~--~~~~~~~~~~~~~~~lp~~~~~~~~~~nv~~~~~~pq~~lL- 391 (518)
.++|.+|+......++.+....+-+++.+..++|.. +... .....+-+.+...--.+.+.+.+.+|+.+.+
T Consensus 441 ~v~Fg~fn~~~Ki~p~~l~~WarIL~~vP~s~L~l~~~g~~~------g~~~~~~~~~~~~GI~~Rv~F~g~~p~~e~la 514 (631)
T 3q3e_A 441 VVNIGIASTTMKLNPYFLEALKAIRDRAKVKVHFHFALGQSN------GITHPYVERFIKSYLGDSATAHPHSPYHQYLR 514 (631)
T ss_dssp EEEEEEEECSTTCCHHHHHHHHHHHHHCSSEEEEEEEESSCC------GGGHHHHHHHHHHHHGGGEEEECCCCHHHHHH
T ss_pred eEEEEECCccccCCHHHHHHHHHHHHhCCCcEEEEEecCCCc------hhhHHHHHHHHHcCCCccEEEcCCCCHHHHHH
Confidence 589999999888889999999999999888877753 3221 1110011122111113578888999976544
Q ss_pred --ccCCCcccc---cccCchhHHHHHHhCCceecCCccc-ccchhHHHHHHhhhcceeeccccccccccCccChHHHHHH
Q 010093 392 --DHEAVGGFV---THCGWNSTLEAVAAGVPLVTWPVAA-EQFYNEKMVNEILKIGVGVGIQKWCRIVGDFVKRETIEKA 465 (518)
Q Consensus 392 --~~~~~~~~I---tHgG~~s~~eal~~GvP~l~~P~~~-DQ~~na~~v~e~~G~G~~l~~~~~~~~~~~~~~~~~l~~a 465 (518)
...++ |+ ..+|..|+.||+++|||+|+.+--. -...-+..+ +..|+...+- ..+.++..+.
T Consensus 515 ~y~~aDI--fLDpfpy~GgtTtlEALwmGVPVVTl~G~~~asRvgaSlL-~~~GLpE~LI----------A~d~eeYv~~ 581 (631)
T 3q3e_A 515 ILHNCDM--MVNPFPFGNTNGIIDMVTLGLVGVCKTGAEVHEHIDEGLF-KRLGLPEWLI----------ANTVDEYVER 581 (631)
T ss_dssp HHHTCSE--EECCSSSCCSHHHHHHHHTTCCEEEECCSSHHHHHHHHHH-HHTTCCGGGE----------ESSHHHHHHH
T ss_pred HHhcCcE--EEeCCcccCChHHHHHHHcCCCEEeccCCcHHHHhHHHHH-HhcCCCccee----------cCCHHHHHHH
Confidence 55444 43 3478899999999999999987421 111112233 3445543211 2367778777
Q ss_pred HHHHhcCChHHHHHHHH
Q 010093 466 VNEIMVGDRAEEMRSRA 482 (518)
Q Consensus 466 v~~ll~~~~~~~~~~~a 482 (518)
.-++.+ |+..+++.
T Consensus 582 Av~La~---D~~~l~~L 595 (631)
T 3q3e_A 582 AVRLAE---NHQERLEL 595 (631)
T ss_dssp HHHHHH---CHHHHHHH
T ss_pred HHHHhC---CHHHHHHH
Confidence 778887 55555443
No 53
>3rhz_A GTF3, nucleotide sugar synthetase-like protein; glycosyltransferase, transferase; HET: UDP; 1.90A {Streptococcus parasanguinis} PDB: 3qkw_A*
Probab=96.90 E-value=0.002 Score=62.65 Aligned_cols=110 Identities=15% Similarity=0.146 Sum_probs=76.3
Q ss_pred CcEeecCccHHHhh---ccCCCcccccccC---------chhHHHHHHhCCceecCCcccccchhHHHHHHhhhcceeec
Q 010093 378 GLIIRGWAPQVLIL---DHEAVGGFVTHCG---------WNSTLEAVAAGVPLVTWPVAAEQFYNEKMVNEILKIGVGVG 445 (518)
Q Consensus 378 nv~~~~~~pq~~lL---~~~~~~~~ItHgG---------~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~e~~G~G~~l~ 445 (518)
||.+.+|+|+.++. ..++..++..-+. -+-+.|++++|+|+|+.+ ...++..+ ++.|+|..++
T Consensus 215 nV~f~G~~~~~el~~~l~~~~~~lv~~~~~~~~y~~~~~P~Kl~eymA~G~PVI~~~----~~~~~~~v-~~~~~G~~~~ 289 (339)
T 3rhz_A 215 NVHKINYRPDEQLLMEMSQGGFGLVWMDDKDKEYQSLYCSYKLGSFLAAGIPVIVQE----GIANQELI-ENNGLGWIVK 289 (339)
T ss_dssp TEEEEECCCHHHHHHHHHTEEEEECCCCGGGHHHHTTCCCHHHHHHHHHTCCEEEET----TCTTTHHH-HHHTCEEEES
T ss_pred CEEEeCCCCHHHHHHHHHhCCEEEEECCCchhHHHHhcChHHHHHHHHcCCCEEEcc----ChhHHHHH-HhCCeEEEeC
Confidence 99999999987754 3344544442332 235789999999999744 56777888 6999999873
Q ss_pred cccccccccCccChHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHH
Q 010093 446 IQKWCRIVGDFVKRETIEKAVNEIMVGDRAEEMRSRAKALGKMAKRAVENGGSSYSDLSALIEE 509 (518)
Q Consensus 446 ~~~~~~~~~~~~~~~~l~~av~~ll~~~~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~ 509 (518)
+.+++.+++.++.. ++...+++++++.+++++ .|.-...++.+.+.+
T Consensus 290 ------------~~~e~~~~i~~l~~-~~~~~m~~na~~~a~~~~----~~~f~k~~l~~~~~~ 336 (339)
T 3rhz_A 290 ------------DVEEAIMKVKNVNE-DEYIELVKNVRSFNPILR----KGFFTRRLLTESVFQ 336 (339)
T ss_dssp ------------SHHHHHHHHHHCCH-HHHHHHHHHHHHHTHHHH----TTHHHHHHHHHHHHH
T ss_pred ------------CHHHHHHHHHHhCH-HHHHHHHHHHHHHHHHhh----ccHHHHHHHHHHHHH
Confidence 35788888888764 334678888888888777 344445555555443
No 54
>1psw_A ADP-heptose LPS heptosyltransferase II; structural genomics, NYSGXRC, LPS biosynthetic pathway, PSI, protein structure initiative; 2.00A {Escherichia coli} SCOP: c.87.1.7
Probab=96.81 E-value=0.065 Score=51.94 Aligned_cols=103 Identities=16% Similarity=0.110 Sum_probs=67.0
Q ss_pred cEEEEEcCCCccChHHHHHHHHHHHhC--CCeEEEEeCCCCccchhhhhhhhhccCCCe-EEEEeeCCCccCCCCCCCCc
Q 010093 36 LHVFFFPFMAHGHMIPIVDMAKLFATR--GVKASVITTPANAPYVSKSVERANELGIEM-DVKTIKFPSVEAGLPEGCEN 112 (518)
Q Consensus 36 ~kIl~~~~~~~GH~~p~l~LA~~L~~r--GH~Vt~~~~~~~~~~~~~~~~~~~~~g~~i-~~~~ip~~~~~~~l~~~~~~ 112 (518)
|||+++.....|++.-..++.++|+++ |.+|++++.+.+.+.+... ..+ ++..++.. ...
T Consensus 1 mkILii~~~~~GD~i~~~p~l~~Lk~~~P~~~i~~l~~~~~~~l~~~~--------p~i~~v~~~~~~-------~~~-- 63 (348)
T 1psw_A 1 MKILVIGPSWVGDMMMSQSLYRTLQARYPQAIIDVMAPAWCRPLLSRM--------PEVNEAIPMPLG-------HGA-- 63 (348)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHHHHHHSTTCEEEEEECGGGHHHHTTC--------TTEEEEEEC---------------
T ss_pred CeEEEEeccccCHHHHHHHHHHHHHHHCCCCEEEEEECcchhHHHhcC--------CccCEEEEecCC-------ccc--
Confidence 589999999999999999999999987 9999999998766544432 123 23333210 000
Q ss_pred cccccchhhhhhHHHHHHHHHhhHHHHHHHHhhCCCCEEEecCCCccHHHHHHHcCCCeEE
Q 010093 113 LDAITNEVNKGLIVKFFGATMKLQEPLEQLLQEHKPDCLVADTFFPWATDAAAKFGIPRLV 173 (518)
Q Consensus 113 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~~pDlVI~D~~~~~~~~iA~~lgiP~v~ 173 (518)
..+. ....+.+.+++.+||++|.=....-...++...|+|...
T Consensus 64 ----------~~~~--------~~~~l~~~l~~~~~D~vid~~~~~~sa~~~~~~~~~~~i 106 (348)
T 1psw_A 64 ----------LEIG--------ERRKLGHSLREKRYDRAYVLPNSFKSALVPLFAGIPHRT 106 (348)
T ss_dssp -----------CHH--------HHHHHHHHTTTTTCSEEEECSCCSGGGHHHHHTTCSEEE
T ss_pred ----------cchH--------HHHHHHHHHHhcCCCEEEECCCChHHHHHHHHhCCCEEe
Confidence 0000 112344556778999999333334456678888999754
No 55
>2bfw_A GLGA glycogen synthase; glycosyltransferase family 5 UDP/ADP-glucose-glycogen syntha rossman folds, transferase; 1.8A {Pyrococcus abyssi} SCOP: c.87.1.8
Probab=96.33 E-value=0.063 Score=47.20 Aligned_cols=76 Identities=11% Similarity=0.033 Sum_probs=53.8
Q ss_pred CcEe-ecCccH---HHhhccCCCcccccc----cCchhHHHHHHhCCceecCCcccccchhHHHHHHhhhcceeeccccc
Q 010093 378 GLII-RGWAPQ---VLILDHEAVGGFVTH----CGWNSTLEAVAAGVPLVTWPVAAEQFYNEKMVNEILKIGVGVGIQKW 449 (518)
Q Consensus 378 nv~~-~~~~pq---~~lL~~~~~~~~ItH----gG~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~e~~G~G~~l~~~~~ 449 (518)
|+++ .+++++ ..++..+++ +|.- |...++.||+++|+|+|+.... .....+ ..+.|..+..
T Consensus 96 ~v~~~~g~~~~~~~~~~~~~ad~--~l~ps~~e~~~~~~~Ea~a~G~PvI~~~~~----~~~e~~--~~~~g~~~~~--- 164 (200)
T 2bfw_A 96 NVKVITEMLSREFVRELYGSVDF--VIIPSYFEPFGLVALEAMCLGAIPIASAVG----GLRDII--TNETGILVKA--- 164 (200)
T ss_dssp TEEEECSCCCHHHHHHHHTTCSE--EEECCSCCSSCHHHHHHHHTTCEEEEESCH----HHHHHC--CTTTCEEECT---
T ss_pred CEEEEeccCCHHHHHHHHHHCCE--EEECCCCCCccHHHHHHHHCCCCEEEeCCC----ChHHHc--CCCceEEecC---
Confidence 8999 999985 457766555 5532 2346899999999999987542 222222 3456777643
Q ss_pred cccccCccChHHHHHHHHHHhc
Q 010093 450 CRIVGDFVKRETIEKAVNEIMV 471 (518)
Q Consensus 450 ~~~~~~~~~~~~l~~av~~ll~ 471 (518)
.+.+++.++|.++++
T Consensus 165 -------~~~~~l~~~i~~l~~ 179 (200)
T 2bfw_A 165 -------GDPGELANAILKALE 179 (200)
T ss_dssp -------TCHHHHHHHHHHHHH
T ss_pred -------CCHHHHHHHHHHHHh
Confidence 488999999999984
No 56
>2wqk_A 5'-nucleotidase SURE; SURE protein, putative acid phosphatase, structural genomics, 3-D structure, mixed alpha/beta protein, NPPSFA; 1.50A {Aquifex aeolicus}
Probab=92.45 E-value=0.69 Score=42.31 Aligned_cols=115 Identities=15% Similarity=0.185 Sum_probs=64.6
Q ss_pred CcEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCCCCccchhhhhhhhhccCCCeEEEEeeCCCccCCCCCCCCccc
Q 010093 35 QLHVFFFPFMAHGHMIPIVDMAKLFATRGVKASVITTPANAPYVSKSVERANELGIEMDVKTIKFPSVEAGLPEGCENLD 114 (518)
Q Consensus 35 ~~kIl~~~~~~~GH~~p~l~LA~~L~~rGH~Vt~~~~~~~~~~~~~~~~~~~~~g~~i~~~~ip~~~~~~~l~~~~~~~~ 114 (518)
|.|||+..--+. +---+..|+++|.+.| +|+++.|...+.-+..... ...++++..+... .....+
T Consensus 1 Mp~ILlTNDDGi-~apGi~~L~~~l~~~g-~V~VvAP~~~~Sg~g~siT----~~~pl~~~~~~~~--------~~~~v~ 66 (251)
T 2wqk_A 1 MPTFLLVNDDGY-FSPGINALREALKSLG-RVVVVAPDRNLSGVGHSLT----FTEPLKMRKIDTD--------FYTVID 66 (251)
T ss_dssp -CEEEEECSSCT-TCHHHHHHHHHHTTTS-EEEEEEESSCCTTSCCSCC----CSSCEEEEEEETT--------EEEETT
T ss_pred CCEEEEEcCCCC-CcHHHHHHHHHHHhCC-CEEEEeeCCCCcccccCcC----CCCCceeEEeecc--------ceeecC
Confidence 568888876554 3345788999999998 5999998766554332211 1123444433210 000011
Q ss_pred cccchhhhhhHHHHHHHHHhhHHHHHHHHhhCCCCEEEecC----------CCc---cHHHHHHHcCCCeEEEecc
Q 010093 115 AITNEVNKGLIVKFFGATMKLQEPLEQLLQEHKPDCLVADT----------FFP---WATDAAAKFGIPRLVFHGT 177 (518)
Q Consensus 115 ~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~~pDlVI~D~----------~~~---~~~~iA~~lgiP~v~~~~~ 177 (518)
..+ - +-..-.+..++...+||+||+.. ++. .+..=|..+|||.|.++..
T Consensus 67 GTP-------a-------DCV~lal~~~l~~~~PDLVvSGIN~G~N~g~dv~ySGTVgAA~Ea~~~GipaIA~S~~ 128 (251)
T 2wqk_A 67 GTP-------A-------DCVHLGYRVILEEKKPDLVLSGINEGPNLGEDITYSGTVSGAMEGRILGIPSIAFSAF 128 (251)
T ss_dssp CCH-------H-------HHHHHHHHTTTTTCCCSEEEEEEESSCCCGGGGGGCHHHHHHHHHHHTTCCEEEEEEE
T ss_pred CCh-------H-------HHHhhhhhhhcCCCCCCEEEeCccCCCccccceecchHHHHHHHHHhcCCCeEEEEcc
Confidence 111 0 11112344556667999999832 222 4556677889999998753
No 57
>3vue_A GBSS-I, granule-bound starch synthase 1, chloroplastic/amyloplastic; rossmann fold, glycosyltransferase, transferase; 2.70A {Oryza sativa japonica group} PDB: 3vuf_A*
Probab=92.32 E-value=1.2 Score=46.00 Aligned_cols=171 Identities=11% Similarity=-0.019 Sum_probs=90.6
Q ss_pred EEEEecCCcccCCHHHHHHHHHHHHhC---CCcEEEEEcCCCCCCCCCCCCCCChhHHH--HHhcCCCcEeecCccHH--
Q 010093 316 VVYVCFGSLANFTSAQLMEIATGLEAS---GRNFIWVVSKNKNDGGEGGNEDWLPEGFE--KRMEGKGLIIRGWAPQV-- 388 (518)
Q Consensus 316 vIyvslGS~~~~~~~~~~~l~~al~~~---~~~~i~~~~~~~~~~~~~~~~~~lp~~~~--~~~~~~nv~~~~~~pq~-- 388 (518)
++++..|.+. ..+.+..+++|+..+ +.++++...+.. . ....+. ....+.++.+..+.++.
T Consensus 328 p~i~~vgRl~--~~Kg~~~li~a~~~l~~~~~~l~l~G~G~~------~----~~~~~~~~~~~~~~~v~~~~~~~~~~~ 395 (536)
T 3vue_A 328 PLIAFIGRLE--EQKGPDVMAAAIPELMQEDVQIVLLGTGKK------K----FEKLLKSMEEKYPGKVRAVVKFNAPLA 395 (536)
T ss_dssp CEEEEECCBS--GGGCHHHHHHHHHHHTTSSCEEEEECCBCH------H----HHHHHHHHHHHSTTTEEEECSCCHHHH
T ss_pred cEEEEEeecc--ccCChHHHHHHHHHhHhhCCeEEEEeccCc------h----HHHHHHHHHhhcCCceEEEEeccHHHH
Confidence 4556667664 456677777777654 456555533322 0 111121 12246788888877754
Q ss_pred -HhhccCCCccccc---ccCc-hhHHHHHHhCCceecCCcccccchhHHHHHHhhhcceeeccccccccccCccChHHHH
Q 010093 389 -LILDHEAVGGFVT---HCGW-NSTLEAVAAGVPLVTWPVAAEQFYNEKMVNEILKIGVGVGIQKWCRIVGDFVKRETIE 463 (518)
Q Consensus 389 -~lL~~~~~~~~It---HgG~-~s~~eal~~GvP~l~~P~~~DQ~~na~~v~e~~G~G~~l~~~~~~~~~~~~~~~~~l~ 463 (518)
.+++.+++ ||. +=|+ .+++||+++|+|+|+.... .....| +.-.-|.......-.-.-=+..++++|.
T Consensus 396 ~~~~~~aD~--~v~PS~~E~fgl~~lEAma~G~PvI~s~~g----G~~e~V-~dg~~G~~~~~~~~~g~l~~~~d~~~la 468 (536)
T 3vue_A 396 HLIMAGADV--LAVPSRFEPCGLIQLQGMRYGTPCACASTG----GLVDTV-IEGKTGFHMGRLSVDCKVVEPSDVKKVA 468 (536)
T ss_dssp HHHHHHCSE--EEECCSCCSSCSHHHHHHHTTCCEEECSCT----HHHHHC-CBTTTEEECCCCCSCTTCCCHHHHHHHH
T ss_pred HHHHHhhhe--eecccccCCCCHHHHHHHHcCCCEEEcCCC----Cchhee-eCCCCccccccCCCceeEECCCCHHHHH
Confidence 35666555 553 1233 4899999999999986542 333333 2322333221110000000124788999
Q ss_pred HHHHHHhcCChHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHh
Q 010093 464 KAVNEIMVGDRAEEMRSRAKALGKMAKRAVENGGSSYSDLSALIEELRL 512 (518)
Q Consensus 464 ~av~~ll~~~~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~~~~ 512 (518)
++|+++|.-..++.+ +++.+.++++.-|=+...++-.+-..+
T Consensus 469 ~ai~ral~~~~~~~~-------~~~~~~am~~~fSW~~~A~~y~~ly~~ 510 (536)
T 3vue_A 469 ATLKRAIKVVGTPAY-------EEMVRNCMNQDLSWKGPAKNWENVLLG 510 (536)
T ss_dssp HHHHHHHHHTTSHHH-------HHHHHHHHHSCCSSHHHHHHHHHHHHT
T ss_pred HHHHHHHHhcCcHHH-------HHHHHHHHHhcCCHHHHHHHHHHHHHH
Confidence 999998851112232 333444556667766655555554443
No 58
>2phj_A 5'-nucleotidase SURE; SURE protein, putative acid phosphatase, structural genomics, 3-D structure, mixed alpha/beta protein, NPPSFA; 1.50A {Aquifex aeolicus VF5} PDB: 2wqk_A
Probab=91.91 E-value=0.84 Score=41.51 Aligned_cols=115 Identities=15% Similarity=0.208 Sum_probs=65.9
Q ss_pred CcEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCCCCccchhhhhhhhhccCCCeEEEEeeCCCccCCCCCCCCccc
Q 010093 35 QLHVFFFPFMAHGHMIPIVDMAKLFATRGVKASVITTPANAPYVSKSVERANELGIEMDVKTIKFPSVEAGLPEGCENLD 114 (518)
Q Consensus 35 ~~kIl~~~~~~~GH~~p~l~LA~~L~~rGH~Vt~~~~~~~~~~~~~~~~~~~~~g~~i~~~~ip~~~~~~~l~~~~~~~~ 114 (518)
|||||+..--+. +---+..|+++|.+.| +|+++.+...+.-...... ....+++..+.. .. ....+
T Consensus 1 ~M~ILlTNDDGi-~apGi~aL~~~l~~~g-~V~VVAP~~~~Sg~g~sit----~~~pl~~~~~~~-----~~---~~~v~ 66 (251)
T 2phj_A 1 MPTFLLVNDDGY-FSPGINALREALKSLG-RVVVVAPDRNLSGVGHSLT----FTEPLKMRKIDT-----DF---YTVID 66 (251)
T ss_dssp -CEEEEECSSCT-TCHHHHHHHHHHTTTS-EEEEEEESSCCTTSCCSCC----CSSCEEEEEEET-----TE---EEETT
T ss_pred CCEEEEECCCCC-CCHHHHHHHHHHHhcC-CEEEEecCCCccCCcccee----cCCCeEEEEecC-----CC---eEEEC
Confidence 579999886664 4456889999999988 9999999876654433211 122344444421 00 01111
Q ss_pred cccchhhhhhHHHHHHHHHhhHHHHHHHHhhCCCCEEEecC----------CCc---cHHHHHHHcCCCeEEEecc
Q 010093 115 AITNEVNKGLIVKFFGATMKLQEPLEQLLQEHKPDCLVADT----------FFP---WATDAAAKFGIPRLVFHGT 177 (518)
Q Consensus 115 ~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~~pDlVI~D~----------~~~---~~~~iA~~lgiP~v~~~~~ 177 (518)
..+ -.. ..-.+..++...+||+||+.. ++. .+..-|..+|||.|.++..
T Consensus 67 GTP-------aDC-------V~lal~~l~~~~~PDLVvSGIN~G~Nlg~dv~ySGTVgAA~Ea~~~GiPaIA~S~~ 128 (251)
T 2phj_A 67 GTP-------ADC-------VHLGYRVILEEKKPDLVLSGINEGPNLGEDITYSGTVSGAMEGRILGIPSIAFSAF 128 (251)
T ss_dssp CCH-------HHH-------HHHHHHTTTTTCCCSEEEEEEESSCCCGGGGGGCHHHHHHHHHHHTTCCEEEEEEE
T ss_pred CCH-------HHH-------HHHHHHHhcCCCCCCEEEECCcCCCcCCCCCccchHHHHHHHHHHcCCCeEEEEcC
Confidence 111 111 111333444446899999742 222 2445577789999998764
No 59
>3fgn_A Dethiobiotin synthetase; biotin biosynthesis, BIOD, ATP-BIND ligase, magnesium, nucleotide-binding; 1.85A {Mycobacterium tuberculosis} PDB: 3fmf_A* 3fmi_A* 3fpa_A*
Probab=89.72 E-value=4 Score=37.27 Aligned_cols=52 Identities=15% Similarity=0.022 Sum_probs=30.1
Q ss_pred chHHhhhhccCCCCCCCcEEEEEcCC-CccChHHHHHHHHHHHhCCCeEEEEe
Q 010093 19 LSSYLIRKLNMGSEIPQLHVFFFPFM-AHGHMIPIVDMAKLFATRGVKASVIT 70 (518)
Q Consensus 19 ~~~~~~~~~~m~~~~~~~kIl~~~~~-~~GH~~p~l~LA~~L~~rGH~Vt~~~ 70 (518)
-||=|+++|.+-..++|..|++.... .-|=..-.+.|++.|.++|++|.++=
T Consensus 10 ~~~~~~~~~~~~~~~~m~~i~Itgt~t~vGKT~vt~gL~~~l~~~G~~V~~fK 62 (251)
T 3fgn_A 10 HSSGLQGTENLYFQSHMTILVVTGTGTGVGKTVVCAALASAARQAGIDVAVCK 62 (251)
T ss_dssp ------------CCSSCEEEEEEESSTTSCHHHHHHHHHHHHHHTTCCEEEEE
T ss_pred ccchhhHHHHHhcccCCCEEEEEeCCCCCcHHHHHHHHHHHHHHCCCeEEEEe
Confidence 35677888886664343344444443 78899999999999999999999874
No 60
>3vue_A GBSS-I, granule-bound starch synthase 1, chloroplastic/amyloplastic; rossmann fold, glycosyltransferase, transferase; 2.70A {Oryza sativa japonica group} PDB: 3vuf_A*
Probab=86.94 E-value=0.38 Score=49.71 Aligned_cols=40 Identities=18% Similarity=0.179 Sum_probs=29.6
Q ss_pred CCcEEEEEcCC------CccChHHHHHHHHHHHhCCCeEEEEeCCC
Q 010093 34 PQLHVFFFPFM------AHGHMIPIVDMAKLFATRGVKASVITTPA 73 (518)
Q Consensus 34 ~~~kIl~~~~~------~~GH~~p~l~LA~~L~~rGH~Vt~~~~~~ 73 (518)
+.|||+|++.- +.|=-.-...|+++|+++||+|++++|.+
T Consensus 8 ~~MkIl~vs~E~~P~~K~GGLadvv~~L~~aL~~~G~~V~Vi~P~Y 53 (536)
T 3vue_A 8 HHMNVVFVGAEMAPWSKTGGLGDVLGGLPPAMAANGHRVMVISPRY 53 (536)
T ss_dssp CCCEEEEECSCBTTTBCSSHHHHHHHHHHHHHHTTTCEEEEEEECC
T ss_pred CCcEEEEEEEeccchhccCcHHHHHHHHHHHHHHcCCeEEEEecCc
Confidence 56999999632 12222346789999999999999999643
No 61
>2ywr_A Phosphoribosylglycinamide formyltransferase; rossmann fold, structural genomics, NPPSFA; 1.77A {Aquifex aeolicus}
Probab=85.87 E-value=9 Score=33.95 Aligned_cols=108 Identities=10% Similarity=0.150 Sum_probs=59.1
Q ss_pred CcEEEEEcCCCccChHHHHHHHHHHHhCCC--eEEEEeCCCCccchhhhhhhhhccCCCeEEEEeeCCCccCCCCCCCCc
Q 010093 35 QLHVFFFPFMAHGHMIPIVDMAKLFATRGV--KASVITTPANAPYVSKSVERANELGIEMDVKTIKFPSVEAGLPEGCEN 112 (518)
Q Consensus 35 ~~kIl~~~~~~~GH~~p~l~LA~~L~~rGH--~Vt~~~~~~~~~~~~~~~~~~~~~g~~i~~~~ip~~~~~~~l~~~~~~ 112 (518)
|+||+|+..++.+ .+.++.++|.+.+| +|..+.+............ .. ++.+..++ +...
T Consensus 1 m~rI~vl~SG~g~---~~~~~l~~l~~~~~~~~i~~Vvs~~~~~~~~~~A~---~~--gIp~~~~~--------~~~~-- 62 (216)
T 2ywr_A 1 MLKIGVLVSGRGS---NLQAIIDAIESGKVNASIELVISDNPKAYAIERCK---KH--NVECKVIQ--------RKEF-- 62 (216)
T ss_dssp CEEEEEEECSCCH---HHHHHHHHHHTTSSCEEEEEEEESCTTCHHHHHHH---HH--TCCEEECC--------GGGS--
T ss_pred CCEEEEEEeCCcH---HHHHHHHHHHhCCCCCeEEEEEeCCCChHHHHHHH---Hc--CCCEEEeC--------cccc--
Confidence 4699988777643 46778888888888 7765544322111211111 11 34343332 0000
Q ss_pred cccccchhhhhhHHHHHHHHHhhHHHHHHHHhhCCCCEEEecCCCc-cHHHHHHHcCCCeEEEecc
Q 010093 113 LDAITNEVNKGLIVKFFGATMKLQEPLEQLLQEHKPDCLVADTFFP-WATDAAAKFGIPRLVFHGT 177 (518)
Q Consensus 113 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~~pDlVI~D~~~~-~~~~iA~~lgiP~v~~~~~ 177 (518)
. .. +...+.+.+.+++.++|+||+-.+.. ....+-......++-++++
T Consensus 63 -~---~r-------------~~~~~~~~~~l~~~~~Dliv~a~y~~il~~~~l~~~~~~~iNiHpS 111 (216)
T 2ywr_A 63 -P---SK-------------KEFEERMALELKKKGVELVVLAGFMRILSHNFLKYFPNKVINIHPS 111 (216)
T ss_dssp -S---SH-------------HHHHHHHHHHHHHTTCCEEEESSCCSCCCHHHHTTSTTCEEEEESS
T ss_pred -c---ch-------------hhhhHHHHHHHHhcCCCEEEEeCchhhCCHHHHhhccCCeEEEcCC
Confidence 0 00 11234566778889999999887654 4444445555566666554
No 62
>3auf_A Glycinamide ribonucleotide transformylase 1; structural genomics, riken structural genomics/proteomics in RSGI, rossmann fold; 2.07A {Symbiobacterium toebii}
Probab=85.83 E-value=12 Score=33.41 Aligned_cols=109 Identities=10% Similarity=0.076 Sum_probs=62.3
Q ss_pred CCcEEEEEcCCCccChHHHHHHHHHHHhC--CCeEEEEeCCCCccchhhhhhhhhccCCCeEEEEeeCCCccCCCCCCCC
Q 010093 34 PQLHVFFFPFMAHGHMIPIVDMAKLFATR--GVKASVITTPANAPYVSKSVERANELGIEMDVKTIKFPSVEAGLPEGCE 111 (518)
Q Consensus 34 ~~~kIl~~~~~~~GH~~p~l~LA~~L~~r--GH~Vt~~~~~~~~~~~~~~~~~~~~~g~~i~~~~ip~~~~~~~l~~~~~ 111 (518)
+|+||+|+..++.+ .+.++.++|.+. +|+|..+.+..-......... ..++.+..++ +...
T Consensus 21 ~~~rI~~l~SG~g~---~~~~~l~~l~~~~~~~~I~~Vvt~~~~~~~~~~A~-----~~gIp~~~~~--------~~~~- 83 (229)
T 3auf_A 21 HMIRIGVLISGSGT---NLQAILDGCREGRIPGRVAVVISDRADAYGLERAR-----RAGVDALHMD--------PAAY- 83 (229)
T ss_dssp TCEEEEEEESSCCH---HHHHHHHHHHTTSSSEEEEEEEESSTTCHHHHHHH-----HTTCEEEECC--------GGGS-
T ss_pred CCcEEEEEEeCCcH---HHHHHHHHHHhCCCCCeEEEEEcCCCchHHHHHHH-----HcCCCEEEEC--------cccc-
Confidence 57899999777632 467778888876 688876654422111111111 1245444432 1110
Q ss_pred ccccccchhhhhhHHHHHHHHHhhHHHHHHHHhhCCCCEEEecCCCc-cHHHHHHHcCCCeEEEecc
Q 010093 112 NLDAITNEVNKGLIVKFFGATMKLQEPLEQLLQEHKPDCLVADTFFP-WATDAAAKFGIPRLVFHGT 177 (518)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~~pDlVI~D~~~~-~~~~iA~~lgiP~v~~~~~ 177 (518)
. .. +...+++.+.+++.+||+||+-.|.. ....+-..+...++-++++
T Consensus 84 --~---~r-------------~~~~~~~~~~l~~~~~Dliv~agy~~IL~~~~l~~~~~~~iNiHpS 132 (229)
T 3auf_A 84 --P---SR-------------TAFDAALAERLQAYGVDLVCLAGYMRLVRGPMLTAFPNRILNIHPS 132 (229)
T ss_dssp --S---SH-------------HHHHHHHHHHHHHTTCSEEEESSCCSCCCHHHHHHSTTCEEEEESS
T ss_pred --c---ch-------------hhccHHHHHHHHhcCCCEEEEcChhHhCCHHHHhhccCCEEEEccC
Confidence 0 00 11234566778889999999887654 4555556666667766654
No 63
>3av3_A Phosphoribosylglycinamide formyltransferase; structural genomics, riken structural genomics/proteomics in RSGI, rossmann fold; HET: MSE; 1.70A {Geobacillus kaustophilus}
Probab=84.13 E-value=14 Score=32.56 Aligned_cols=108 Identities=6% Similarity=0.064 Sum_probs=61.2
Q ss_pred CcEEEEEcCCCccChHHHHHHHHHHHhC--CCeEEEEeCCCCccchhhhhhhhhccCCCeEEEEeeCCCccCCCCCCCCc
Q 010093 35 QLHVFFFPFMAHGHMIPIVDMAKLFATR--GVKASVITTPANAPYVSKSVERANELGIEMDVKTIKFPSVEAGLPEGCEN 112 (518)
Q Consensus 35 ~~kIl~~~~~~~GH~~p~l~LA~~L~~r--GH~Vt~~~~~~~~~~~~~~~~~~~~~g~~i~~~~ip~~~~~~~l~~~~~~ 112 (518)
|+||+++..++.+ .+.++.++|.+. +|+|..+.+..-...+..... ..++.+..++ +...
T Consensus 3 m~ki~vl~sG~g~---~~~~~l~~l~~~~l~~~I~~Vit~~~~~~v~~~A~-----~~gIp~~~~~--------~~~~-- 64 (212)
T 3av3_A 3 MKRLAVFASGSGT---NFQAIVDAAKRGDLPARVALLVCDRPGAKVIERAA-----RENVPAFVFS--------PKDY-- 64 (212)
T ss_dssp CEEEEEECCSSCH---HHHHHHHHHHTTCCCEEEEEEEESSTTCHHHHHHH-----HTTCCEEECC--------GGGS--
T ss_pred CcEEEEEEECCcH---HHHHHHHHHHhCCCCCeEEEEEeCCCCcHHHHHHH-----HcCCCEEEeC--------cccc--
Confidence 6789888777643 366777888877 789876665422111211111 1134443332 0000
Q ss_pred cccccchhhhhhHHHHHHHHHhhHHHHHHHHhhCCCCEEEecCCCc-cHHHHHHHcCCCeEEEecc
Q 010093 113 LDAITNEVNKGLIVKFFGATMKLQEPLEQLLQEHKPDCLVADTFFP-WATDAAAKFGIPRLVFHGT 177 (518)
Q Consensus 113 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~~pDlVI~D~~~~-~~~~iA~~lgiP~v~~~~~ 177 (518)
. .. +...+.+.+.+++.+||+||+-.|.. ....+-..+...++-++++
T Consensus 65 -~---~~-------------~~~~~~~~~~l~~~~~Dliv~a~y~~il~~~~l~~~~~~~iNiHpS 113 (212)
T 3av3_A 65 -P---SK-------------AAFESEILRELKGRQIDWIALAGYMRLIGPTLLSAYEGKIVNIHPS 113 (212)
T ss_dssp -S---SH-------------HHHHHHHHHHHHHTTCCEEEESSCCSCCCHHHHHHTTTCEEEEESS
T ss_pred -c---ch-------------hhhHHHHHHHHHhcCCCEEEEchhhhhCCHHHHhhhcCCEEEEecC
Confidence 0 00 11234566778889999999887654 4555556666677776654
No 64
>1mvl_A PPC decarboxylase athal3A; flavoprotein, active site mutant C175S; HET: FMN; 2.00A {Arabidopsis thaliana} SCOP: c.34.1.1 PDB: 1mvn_A* 1e20_A*
Probab=80.13 E-value=2.1 Score=37.79 Aligned_cols=52 Identities=6% Similarity=0.157 Sum_probs=36.6
Q ss_pred hccCCCCCCCcEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCCCCccchh
Q 010093 26 KLNMGSEIPQLHVFFFPFMAHGHMIPIVDMAKLFATRGVKASVITTPANAPYVS 79 (518)
Q Consensus 26 ~~~m~~~~~~~kIl~~~~~~~GH~~p~l~LA~~L~~rGH~Vt~~~~~~~~~~~~ 79 (518)
.++|..+.++.||++...++.+-+. ...+.+.|.++| +|.++.++.....+.
T Consensus 10 ~~~~~~~l~~k~IllgvTGsiaa~k-~~~ll~~L~~~g-~V~vv~T~~A~~fv~ 61 (209)
T 1mvl_A 10 DMEVNTTPRKPRVLLAASGSVAAIK-FGNLCHCFTEWA-EVRAVVTKSSLHFLD 61 (209)
T ss_dssp ---------CCEEEEEECSSGGGGG-HHHHHHHHHTTS-EEEEEECTGGGGTCC
T ss_pred hcccccccCCCEEEEEEeCcHHHHH-HHHHHHHHhcCC-CEEEEEcchHHHhcC
Confidence 3455544456799999999988776 899999999999 999999987665544
No 65
>1g5t_A COB(I)alamin adenosyltransferase; P-loop protein, cobalamin biosynthesis, RECA fold; HET: ATP; 1.80A {Salmonella typhimurium} SCOP: c.37.1.11 PDB: 1g5r_A* 1g64_A*
Probab=80.07 E-value=21 Score=30.99 Aligned_cols=97 Identities=12% Similarity=0.108 Sum_probs=59.9
Q ss_pred CcEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCCCCc------cchhhhhhhhhccCCCeEEEEeeCCCccCCCCC
Q 010093 35 QLHVFFFPFMAHGHMIPIVDMAKLFATRGVKASVITTPANA------PYVSKSVERANELGIEMDVKTIKFPSVEAGLPE 108 (518)
Q Consensus 35 ~~kIl~~~~~~~GH~~p~l~LA~~L~~rGH~Vt~~~~~~~~------~~~~~~~~~~~~~g~~i~~~~ip~~~~~~~l~~ 108 (518)
+-.|+++...+.|-..-.+.+|-..+.+|+.|.|+..-... ..+.+. ++.+.... .++.
T Consensus 28 ~g~i~v~tG~GkGKTTaA~GlalRA~g~G~rV~~vQF~Kg~~~~gE~~~l~~L---------~v~~~~~g-----~gf~- 92 (196)
T 1g5t_A 28 RGIIIVFTGNGKGKTTAAFGTAARAVGHGKNVGVVQFIKGTWPNGERNLLEPH---------GVEFQVMA-----TGFT- 92 (196)
T ss_dssp CCCEEEEESSSSCHHHHHHHHHHHHHHTTCCEEEEESSCCSSCCHHHHHHGGG---------TCEEEECC-----TTCC-
T ss_pred CceEEEECCCCCCHHHHHHHHHHHHHHCCCeEEEEEeeCCCCCccHHHHHHhC---------CcEEEEcc-----cccc-
Confidence 35688888888999999999999999999999999664421 111211 35555542 1111
Q ss_pred CCCccccccchhhhhhHHHHHHHHHhhHHHHHHHHhhCCCCEEEecCCC
Q 010093 109 GCENLDAITNEVNKGLIVKFFGATMKLQEPLEQLLQEHKPDCLVADTFF 157 (518)
Q Consensus 109 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~~pDlVI~D~~~ 157 (518)
. . . +....-...........++.+.+.++|+||.|.+.
T Consensus 93 ---~-~-~------~~~~~~~~~a~~~l~~a~~~l~~~~yDlvILDEi~ 130 (196)
T 1g5t_A 93 ---W-E-T------QNREADTAACMAVWQHGKRMLADPLLDMVVLDELT 130 (196)
T ss_dssp ---C-C-G------GGHHHHHHHHHHHHHHHHHHTTCTTCSEEEEETHH
T ss_pred ---c-C-C------CCcHHHHHHHHHHHHHHHHHHhcCCCCEEEEeCCC
Confidence 1 1 0 11111112223345566666777899999999654
No 66
>2bw0_A 10-FTHFDH, 10-formyltetrahydrofolate dehydrogenase; nucleotide biosynthesis, oxidoreductase; 1.7A {Homo sapiens} SCOP: b.46.1.1 c.65.1.1 PDB: 2cfi_A* 1s3i_A
Probab=78.05 E-value=8 Score=36.81 Aligned_cols=40 Identities=8% Similarity=-0.011 Sum_probs=25.8
Q ss_pred HHHHHHhhCCCCEEEecCCCc-cHHHHHHHcCCCeEEEecc
Q 010093 138 PLEQLLQEHKPDCLVADTFFP-WATDAAAKFGIPRLVFHGT 177 (518)
Q Consensus 138 ~l~~ll~~~~pDlVI~D~~~~-~~~~iA~~lgiP~v~~~~~ 177 (518)
++.+.++..++|++|+-.+.. ....+-......++-++++
T Consensus 90 ~~~~~l~~~~~Dliv~a~y~~ilp~~il~~~~~g~iNiHpS 130 (329)
T 2bw0_A 90 DVVAKYQALGAELNVLPFCSQFIPMEIISAPRHGSIIYHPS 130 (329)
T ss_dssp HHHHHHHTTCCSEEEESSCSSCCCHHHHTCSTTCEEEEESS
T ss_pred HHHHHHHhcCCCEEEEeehhhhCCHHHHhhCcCCEEEEcCC
Confidence 455667788999999887654 3334444445556666654
No 67
>3t5t_A Putative glycosyltransferase; GTB fold, pseudoglycosyltransferase; 1.70A {Streptomyces hygroscopicus} PDB: 4f97_A* 4f96_B* 4f9f_A* 3t7d_A*
Probab=75.22 E-value=10 Score=38.24 Aligned_cols=111 Identities=13% Similarity=0.053 Sum_probs=71.8
Q ss_pred CcEeecCccHH---HhhccCCCccccc---ccCch-hHHHHHHhC---CceecCCcccccchhHHHHHHhhhcceeeccc
Q 010093 378 GLIIRGWAPQV---LILDHEAVGGFVT---HCGWN-STLEAVAAG---VPLVTWPVAAEQFYNEKMVNEILKIGVGVGIQ 447 (518)
Q Consensus 378 nv~~~~~~pq~---~lL~~~~~~~~It---HgG~~-s~~eal~~G---vP~l~~P~~~DQ~~na~~v~e~~G~G~~l~~~ 447 (518)
.|++...+|+. .++..+++ |+. .=|+| +..||+++| .|+|. .+--..+..+ . .-|+.+++
T Consensus 353 ~V~f~g~v~~~el~aly~~ADv--~vv~SlrEGfgLv~~EamA~~~~~g~lVl----Se~aGa~~~l-~--~~allVnP- 422 (496)
T 3t5t_A 353 TVRIDNDNDVNHTIACFRRADL--LIFNSTVDGQNLSTFEAPLVNERDADVIL----SETCGAAEVL-G--EYCRSVNP- 422 (496)
T ss_dssp SEEEEECCCHHHHHHHHHHCSE--EEECCSSBSCCSHHHHHHHHCSSCCEEEE----ETTBTTHHHH-G--GGSEEECT-
T ss_pred CEEEeCCCCHHHHHHHHHhccE--EEECcccccCChhHHHHHHhCCCCCCEEE----eCCCCCHHHh-C--CCEEEECC-
Confidence 57777788864 45555666 432 45877 568999996 44433 3333333333 1 24788866
Q ss_pred cccccccCccChHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHhh
Q 010093 448 KWCRIVGDFVKRETIEKAVNEIMVGDRAEEMRSRAKALGKMAKRAVENGGSSYSDLSALIEELRLS 513 (518)
Q Consensus 448 ~~~~~~~~~~~~~~l~~av~~ll~~~~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 513 (518)
.+.+++.++|.++|+ .+.++-+++.+++.+.++ .-+...-.+.+++.|...
T Consensus 423 ---------~D~~~lA~AI~~aL~-m~~~er~~r~~~~~~~V~-----~~d~~~W~~~fl~~L~~~ 473 (496)
T 3t5t_A 423 ---------FDLVEQAEAISAALA-AGPRQRAEAAARRRDAAR-----PWTLEAWVQAQLDGLAAD 473 (496)
T ss_dssp ---------TBHHHHHHHHHHHHH-CCHHHHHHHHHHHHHHHT-----TCBHHHHHHHHHHHHHHH
T ss_pred ---------CCHHHHHHHHHHHHc-CCHHHHHHHHHHHHHHHH-----HCCHHHHHHHHHHHHhhc
Confidence 489999999999997 333455566666666655 356677788888888754
No 68
>3iqw_A Tail-anchored protein targeting factor GET3; ATPase, Zn binding, protein transport; HET: ANP; 3.00A {Chaetomium thermophilum} PDB: 3iqx_A* 3ibg_A*
Probab=73.66 E-value=19 Score=34.27 Aligned_cols=42 Identities=14% Similarity=0.086 Sum_probs=34.8
Q ss_pred CCcEEEEEc-CCCccChHHHHHHHHHHHhCCCeEEEEeCCCCc
Q 010093 34 PQLHVFFFP-FMAHGHMIPIVDMAKLFATRGVKASVITTPANA 75 (518)
Q Consensus 34 ~~~kIl~~~-~~~~GH~~p~l~LA~~L~~rGH~Vt~~~~~~~~ 75 (518)
++++|+|++ -++-|-..-...+|..|+++|++|.++..+...
T Consensus 14 ~~~~i~~~sgkGGvGKTt~a~~lA~~la~~g~~vllid~D~~~ 56 (334)
T 3iqw_A 14 RSLRWIFVGGKGGVGKTTTSCSLAIQLAKVRRSVLLLSTDPAH 56 (334)
T ss_dssp TTCCEEEEECSTTSSHHHHHHHHHHHHTTSSSCEEEEECCSSC
T ss_pred CCeEEEEEeCCCCccHHHHHHHHHHHHHhCCCcEEEEECCCCC
Confidence 446776555 669999999999999999999999999987543
No 69
>3tqr_A Phosphoribosylglycinamide formyltransferase; purines, pyrimidines, nucleosides, nucleotides; HET: NHE; 1.97A {Coxiella burnetii} SCOP: c.65.1.0
Probab=72.55 E-value=32 Score=30.33 Aligned_cols=42 Identities=12% Similarity=0.265 Sum_probs=29.8
Q ss_pred HHHHHHHHhhCCCCEEEecCCCc-cHHHHHHHcCCCeEEEecc
Q 010093 136 QEPLEQLLQEHKPDCLVADTFFP-WATDAAAKFGIPRLVFHGT 177 (518)
Q Consensus 136 ~~~l~~ll~~~~pDlVI~D~~~~-~~~~iA~~lgiP~v~~~~~ 177 (518)
.+++.+.+++.++|+||+-.+.. ....+-..+.-.++-++++
T Consensus 72 d~~~~~~l~~~~~Dliv~agy~~il~~~~l~~~~~~~iNiHpS 114 (215)
T 3tqr_A 72 ESTLQKTIDHYDPKLIVLAGFMRKLGKAFVSHYSGRMINIHPS 114 (215)
T ss_dssp HHHHHHHHHTTCCSEEEESSCCSCCCHHHHHHTTTSEEEEESS
T ss_pred HHHHHHHHHhcCCCEEEEccchhhCCHHHHhhccCCeEEeCcc
Confidence 34677788899999999887654 4555556666667766654
No 70
>3ty2_A 5'-nucleotidase SURE; surviVal protein, phosphatase, hydrolase; HET: MSE; 1.89A {Coxiella burnetii} SCOP: c.106.1.0
Probab=72.25 E-value=4.2 Score=37.07 Aligned_cols=44 Identities=16% Similarity=0.077 Sum_probs=33.7
Q ss_pred CCCcEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCCCCccch
Q 010093 33 IPQLHVFFFPFMAHGHMIPIVDMAKLFATRGVKASVITTPANAPYV 78 (518)
Q Consensus 33 ~~~~kIl~~~~~~~GH~~p~l~LA~~L~~rGH~Vt~~~~~~~~~~~ 78 (518)
+|+||||+..--+. +---+..|+++|.+ +|+|+++.|...+.-.
T Consensus 9 ~~~m~ILlTNDDGi-~apGi~aL~~~l~~-~~~V~VVAP~~~~Sg~ 52 (261)
T 3ty2_A 9 TPKLRLLLSNDDGV-YAKGLAILAKTLAD-LGEVDVVAPDRNRSGA 52 (261)
T ss_dssp --CCEEEEECSSCT-TCHHHHHHHHHHTT-TSEEEEEEESSCCTTC
T ss_pred CCCCeEEEEcCCCC-CCHHHHHHHHHHHh-cCCEEEEecCCCCcCc
Confidence 57799999986665 45568888999987 8999999998766544
No 71
>3zqu_A Probable aromatic acid decarboxylase; lyase; HET: FNR; 1.50A {Pseudomonas aeruginosa} SCOP: c.34.1.0
Probab=72.20 E-value=2.9 Score=36.96 Aligned_cols=45 Identities=7% Similarity=-0.015 Sum_probs=37.5
Q ss_pred CCcEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCCCCccchh
Q 010093 34 PQLHVFFFPFMAHGHMIPIVDMAKLFATRGVKASVITTPANAPYVS 79 (518)
Q Consensus 34 ~~~kIl~~~~~~~GH~~p~l~LA~~L~~rGH~Vt~~~~~~~~~~~~ 79 (518)
++.||++...|+.|-+. ...|.+.|.++|++|.++.++.....+.
T Consensus 3 ~~k~IllgvTGaiaa~k-~~~ll~~L~~~g~eV~vv~T~~A~~fi~ 47 (209)
T 3zqu_A 3 GPERITLAMTGASGAQY-GLRLLDCLVQEEREVHFLISKAAQLVMA 47 (209)
T ss_dssp SCSEEEEEECSSSCHHH-HHHHHHHHHHTTCEEEEEECHHHHHHHH
T ss_pred CCCEEEEEEECHHHHHH-HHHHHHHHHHCCCEEEEEECccHHHHHH
Confidence 45799999999877777 8899999999999999999976555443
No 72
>3lqk_A Dipicolinate synthase subunit B; flavoprotein, PSI2, MCSG, structural protein structure initiative, midwest center for structural genomics; 2.10A {Bacillus halodurans}
Probab=70.78 E-value=5.5 Score=34.88 Aligned_cols=43 Identities=14% Similarity=0.015 Sum_probs=35.1
Q ss_pred CCcEEEEEcCCCccChH-HHHHHHHHHHhCCCeEEEEeCCCCccc
Q 010093 34 PQLHVFFFPFMAHGHMI-PIVDMAKLFATRGVKASVITTPANAPY 77 (518)
Q Consensus 34 ~~~kIl~~~~~~~GH~~-p~l~LA~~L~~rGH~Vt~~~~~~~~~~ 77 (518)
++.||++...|+ +..+ -...+.+.|.++|++|.++.++.....
T Consensus 6 ~~k~I~lgiTGs-~aa~~k~~~ll~~L~~~g~eV~vv~T~~A~~~ 49 (201)
T 3lqk_A 6 AGKHVGFGLTGS-HCTYHEVLPQMERLVELGAKVTPFVTHTVQTT 49 (201)
T ss_dssp TTCEEEEECCSC-GGGGGGTHHHHHHHHHTTCEEEEECSSCSCCT
T ss_pred CCCEEEEEEECh-HHHHHHHHHHHHHHhhCCCEEEEEEChhHHHH
Confidence 456899998888 4455 789999999999999999999765543
No 73
>3qjg_A Epidermin biosynthesis protein EPID; structural genomics, center for structural genomics of infec diseases, csgid, oxidoreductase; HET: FMN; 2.04A {Staphylococcus aureus} SCOP: c.34.1.0
Probab=69.43 E-value=5.5 Score=34.04 Aligned_cols=43 Identities=9% Similarity=0.090 Sum_probs=35.9
Q ss_pred cEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCCCCccchh
Q 010093 36 LHVFFFPFMAHGHMIPIVDMAKLFATRGVKASVITTPANAPYVS 79 (518)
Q Consensus 36 ~kIl~~~~~~~GH~~p~l~LA~~L~~rGH~Vt~~~~~~~~~~~~ 79 (518)
.||++...++.|=+. ...+.+.|.++|++|.++.++.....+.
T Consensus 6 k~IllgvTGs~aa~k-~~~ll~~L~~~g~~V~vv~T~~A~~fi~ 48 (175)
T 3qjg_A 6 ENVLICLCGSVNSIN-ISHYIIELKSKFDEVNVIASTNGRKFIN 48 (175)
T ss_dssp CEEEEEECSSGGGGG-HHHHHHHHTTTCSEEEEEECTGGGGGSC
T ss_pred CEEEEEEeCHHHHHH-HHHHHHHHHHCCCEEEEEECcCHHHHhh
Confidence 489988888866664 8899999999999999999987666554
No 74
>3ug7_A Arsenical pump-driving ATPase; tail-anchored, membrane protein, targeting factor, ATP-bindi TRC40, ARSA, nucleotide-binding; HET: ADP; 2.90A {Methanocaldococcus jannaschii} PDB: 3ug6_A*
Probab=68.89 E-value=20 Score=34.29 Aligned_cols=46 Identities=15% Similarity=0.183 Sum_probs=36.8
Q ss_pred CCcEEEEEc-CCCccChHHHHHHHHHHHhCCCeEEEEeCCCCccchhh
Q 010093 34 PQLHVFFFP-FMAHGHMIPIVDMAKLFATRGVKASVITTPANAPYVSK 80 (518)
Q Consensus 34 ~~~kIl~~~-~~~~GH~~p~l~LA~~L~~rGH~Vt~~~~~~~~~~~~~ 80 (518)
+|.+|+|++ -++-|-..-...+|..|+++|++|.++..+. ...+..
T Consensus 24 ~~~~i~v~sgKGGvGKTTvA~~LA~~lA~~G~rVLlvD~D~-~~~l~~ 70 (349)
T 3ug7_A 24 DGTKYIMFGGKGGVGKTTMSAATGVYLAEKGLKVVIVSTDP-AHSLRD 70 (349)
T ss_dssp CSCEEEEEECSSSTTHHHHHHHHHHHHHHSSCCEEEEECCT-TCHHHH
T ss_pred CCCEEEEEeCCCCccHHHHHHHHHHHHHHCCCeEEEEeCCC-CCCHHH
Confidence 556776555 5699999999999999999999999999876 333433
No 75
>1e2b_A Enzyme IIB-cellobiose; phosphotransferase system, transferas transport, phosphorylation; NMR {Escherichia coli} SCOP: c.44.2.1 PDB: 1iib_A 1h9c_A* 2wwv_D 2wy2_D
Probab=68.88 E-value=11 Score=29.14 Aligned_cols=40 Identities=13% Similarity=0.226 Sum_probs=32.7
Q ss_pred CCCcEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCC
Q 010093 33 IPQLHVFFFPFMAHGHMIPIVDMAKLFATRGVKASVITTP 72 (518)
Q Consensus 33 ~~~~kIl~~~~~~~GH~~p~l~LA~~L~~rGH~Vt~~~~~ 72 (518)
|+|+||+++|..+.|--.-...+=+.+.++|.++.+-...
T Consensus 1 M~mkkIll~Cg~G~sTS~l~~k~~~~~~~~gi~~~i~a~~ 40 (106)
T 1e2b_A 1 MEKKHIYLFSSAGMSTSLLVSKMRAQAEKYEVPVIIEAFP 40 (106)
T ss_dssp CCCEEEEEECSSSTTTHHHHHHHHHHHHHSCCSEEEEEEC
T ss_pred CCCcEEEEECCCchhHHHHHHHHHHHHHHCCCCeEEEEec
Confidence 3568999999888888888888889999999988766554
No 76
>3da8_A Probable 5'-phosphoribosylglycinamide formyltransferase PURN; glycinamide ribonucleotide transformylase, structure; 1.30A {Mycobacterium tuberculosis} PDB: 3dcj_A*
Probab=68.67 E-value=15 Score=32.42 Aligned_cols=42 Identities=19% Similarity=0.262 Sum_probs=28.3
Q ss_pred HHHHHHHHhhCCCCEEEecCCCc-cHHHHHHHcCCCeEEEecc
Q 010093 136 QEPLEQLLQEHKPDCLVADTFFP-WATDAAAKFGIPRLVFHGT 177 (518)
Q Consensus 136 ~~~l~~ll~~~~pDlVI~D~~~~-~~~~iA~~lgiP~v~~~~~ 177 (518)
.+++.+.+++.++|+||+-.+.. ....+-..+.-.++-++++
T Consensus 78 d~~~~~~l~~~~~Dlivlagy~~iL~~~~l~~~~~~~iNiHpS 120 (215)
T 3da8_A 78 DVAITAATAAHEPDLVVSAGFMRILGPQFLSRFYGRTLNTHPA 120 (215)
T ss_dssp HHHHHHHHHTTCCSEEEEEECCSCCCHHHHHHHTTTEEEEESS
T ss_pred hHHHHHHHHhhCCCEEEEcCchhhCCHHHHhhccCCeEEeCcc
Confidence 44677788899999999876654 4444555555556666554
No 77
>4dim_A Phosphoribosylglycinamide synthetase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, ligase; 2.61A {Anaerococcus prevotii}
Probab=68.67 E-value=18 Score=35.13 Aligned_cols=34 Identities=12% Similarity=0.078 Sum_probs=27.6
Q ss_pred CCcEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCC
Q 010093 34 PQLHVFFFPFMAHGHMIPIVDMAKLFATRGVKASVITTP 72 (518)
Q Consensus 34 ~~~kIl~~~~~~~GH~~p~l~LA~~L~~rGH~Vt~~~~~ 72 (518)
+++||+++-.+.. .+.+++++++.|++|.++..+
T Consensus 6 ~~~~ilI~g~g~~-----~~~~~~a~~~~G~~~v~v~~~ 39 (403)
T 4dim_A 6 DNKRLLILGAGRG-----QLGLYKAAKELGIHTIAGTMP 39 (403)
T ss_dssp CCCEEEEECCCGG-----GHHHHHHHHHHTCEEEEEECS
T ss_pred CCCEEEEECCcHh-----HHHHHHHHHHCCCEEEEEcCC
Confidence 5679999877754 366999999999999999764
No 78
>3vot_A L-amino acid ligase, BL00235; ATP-grAsp motif, ATP-binding; HET: ADP PG4; 1.80A {Bacillus licheniformis}
Probab=67.99 E-value=29 Score=34.09 Aligned_cols=34 Identities=21% Similarity=0.325 Sum_probs=24.0
Q ss_pred HHHHHHhhCCCCEEEec--CCCccHHHHHHHcCCCe
Q 010093 138 PLEQLLQEHKPDCLVAD--TFFPWATDAAAKFGIPR 171 (518)
Q Consensus 138 ~l~~ll~~~~pDlVI~D--~~~~~~~~iA~~lgiP~ 171 (518)
.+.++.++.++|.|+.- .....+..+|+.+|+|.
T Consensus 66 ~~~~~~~~~~id~V~~~~e~~~~~~a~l~e~lglpg 101 (425)
T 3vot_A 66 VVRQTFVEFPFDGVMTLFEPALPFTAKAAEALNLPG 101 (425)
T ss_dssp HHHHHHHHSCCSEEECCCGGGHHHHHHHHHHTTCSS
T ss_pred HHHHhhhhcCCCEEEECCchhHHHHHHHHHHcCCCC
Confidence 45566667899999854 22335667889999994
No 79
>1uqt_A Alpha, alpha-trehalose-phosphate synthase; glycosyltransferase, transferase; HET: U2F; 2.0A {Escherichia coli} SCOP: c.87.1.6 PDB: 1uqu_A* 2wtx_A* 1gz5_A*
Probab=67.90 E-value=18 Score=36.51 Aligned_cols=109 Identities=18% Similarity=0.109 Sum_probs=67.3
Q ss_pred cE-eecCccHHH---hhccCCCccccc---ccCc-hhHHHHHHhCC-----ceecCCcccccchhHHHHHHhhhcceeec
Q 010093 379 LI-IRGWAPQVL---ILDHEAVGGFVT---HCGW-NSTLEAVAAGV-----PLVTWPVAAEQFYNEKMVNEILKIGVGVG 445 (518)
Q Consensus 379 v~-~~~~~pq~~---lL~~~~~~~~It---HgG~-~s~~eal~~Gv-----P~l~~P~~~DQ~~na~~v~e~~G~G~~l~ 445 (518)
++ +.+++|+.+ ++..+++ ||. .=|+ .++.||+++|+ |+|+--..+ .+..+ .-|+.++
T Consensus 333 v~~~~g~v~~~el~~ly~~ADv--~v~pS~~EGfgLv~lEAmA~g~~~~~gpvV~S~~~G----~~~~l----~~g~lv~ 402 (482)
T 1uqt_A 333 LYYLNQHFDRKLLMKIFRYSDV--GLVTPLRDGMNLVAKEYVAAQDPANPGVLVLSQFAG----AANEL----TSALIVN 402 (482)
T ss_dssp EEEECSCCCHHHHHHHHHHCSE--EEECCSSBSCCHHHHHHHHHSCTTSCCEEEEETTBG----GGGTC----TTSEEEC
T ss_pred EEEeCCCCCHHHHHHHHHHccE--EEECCCcccCCchHHHHHHhCCCCCCCCEEEECCCC----CHHHh----CCeEEEC
Confidence 44 457888755 5655665 553 3455 48999999998 555543222 22212 2467775
Q ss_pred cccccccccCccChHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHhh
Q 010093 446 IQKWCRIVGDFVKRETIEKAVNEIMVGDRAEEMRSRAKALGKMAKRAVENGGSSYSDLSALIEELRLS 513 (518)
Q Consensus 446 ~~~~~~~~~~~~~~~~l~~av~~ll~~~~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 513 (518)
+ .+.+++.++|.++|+ ++.+.-+++.++..+.++ + .+...-.+.+++.++..
T Consensus 403 p----------~d~~~lA~ai~~lL~-~~~~~r~~~~~~~~~~v~----~-~s~~~~a~~~l~~l~~~ 454 (482)
T 1uqt_A 403 P----------YDRDEVAAALDRALT-MSLAERISRHAEMLDVIV----K-NDINHWQECFISDLKQI 454 (482)
T ss_dssp T----------TCHHHHHHHHHHHHT-CCHHHHHHHHHHHHHHHH----H-TCHHHHHHHHHHHHHHS
T ss_pred C----------CCHHHHHHHHHHHHc-CCHHHHHHHHHHHHHHHH----h-CCHHHHHHHHHHHHHhc
Confidence 5 478999999999996 222233444444444443 3 46777778888887765
No 80
>3igf_A ALL4481 protein; two-domained protein consisting of the N-terminal alpha-beta the C-terminal all beta domain., structural genomics; 2.00A {Nostoc SP}
Probab=67.69 E-value=7.9 Score=37.60 Aligned_cols=37 Identities=16% Similarity=0.143 Sum_probs=31.4
Q ss_pred CcEEEEEc-CCCccChHHHHHHHHHHHhCCCeEEEEeC
Q 010093 35 QLHVFFFP-FMAHGHMIPIVDMAKLFATRGVKASVITT 71 (518)
Q Consensus 35 ~~kIl~~~-~~~~GH~~p~l~LA~~L~~rGH~Vt~~~~ 71 (518)
|++|+|+. -++.|-..-...+|..|+++|+.|.++..
T Consensus 1 M~~i~~~~gkGG~GKTt~a~~la~~la~~g~~vllvd~ 38 (374)
T 3igf_A 1 MALILTFLGKSGVARTKIAIAAAKLLASQGKRVLLAGL 38 (374)
T ss_dssp -CEEEEEECSBHHHHHHHHHHHHHHHHHTTCCEEEEEC
T ss_pred CcEEEEEeCCCCCcHHHHHHHHHHHHHHCCCCeEEEeC
Confidence 56877665 45888999999999999999999999988
No 81
>2ejb_A Probable aromatic acid decarboxylase; phenylacrylic acid decarboxylase, X-RAY diffraction, structural genomics, NPPSFA; 2.15A {Aquifex aeolicus}
Probab=67.54 E-value=4.8 Score=34.91 Aligned_cols=44 Identities=5% Similarity=0.060 Sum_probs=36.3
Q ss_pred cEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCCCCccchhh
Q 010093 36 LHVFFFPFMAHGHMIPIVDMAKLFATRGVKASVITTPANAPYVSK 80 (518)
Q Consensus 36 ~kIl~~~~~~~GH~~p~l~LA~~L~~rGH~Vt~~~~~~~~~~~~~ 80 (518)
.||++...|+.|-+ =...+.+.|.++|++|.++.++.....+..
T Consensus 2 k~IllgvTGs~aa~-k~~~l~~~L~~~g~~V~vv~T~~A~~~i~~ 45 (189)
T 2ejb_A 2 QKIALCITGASGVI-YGIKLLQVLEELDFSVDLVISRNAKVVLKE 45 (189)
T ss_dssp CEEEEEECSSTTHH-HHHHHHHHHHHTTCEEEEEECHHHHHHHHH
T ss_pred CEEEEEEECHHHHH-HHHHHHHHHHHCCCEEEEEEChhHHHHhhH
Confidence 58999999988855 578999999999999999999876555543
No 82
>1qzu_A Hypothetical protein MDS018; alpha-beta sandwich, lyase; HET: FMN; 2.91A {Homo sapiens} SCOP: c.34.1.1
Probab=66.81 E-value=5.6 Score=35.02 Aligned_cols=50 Identities=14% Similarity=0.147 Sum_probs=35.9
Q ss_pred ccCCCCCCCcEEEEEcCCCccChHHHHHHHHHHHh-CCCeEEEEeCCCCccchh
Q 010093 27 LNMGSEIPQLHVFFFPFMAHGHMIPIVDMAKLFAT-RGVKASVITTPANAPYVS 79 (518)
Q Consensus 27 ~~m~~~~~~~kIl~~~~~~~GH~~p~l~LA~~L~~-rGH~Vt~~~~~~~~~~~~ 79 (518)
+.|.. ++.||++...++.+-+. ...+.+.|.+ +|++|.++.++.....+.
T Consensus 13 ~~~~l--~~k~IllgvTGsiaa~k-~~~lv~~L~~~~g~~V~vv~T~~A~~fi~ 63 (206)
T 1qzu_A 13 APLME--RKFHVLVGVTGSVAALK-LPLLVSKLLDIPGLEVAVVTTERAKHFYS 63 (206)
T ss_dssp ---CC--SSEEEEEEECSSGGGGT-HHHHHHHHC---CEEEEEEECTGGGGSSC
T ss_pred hhccc--CCCEEEEEEeChHHHHH-HHHHHHHHhcccCCEEEEEECHhHHHHhC
Confidence 34443 56789999988877554 5899999999 899999999987665554
No 83
>4gi5_A Quinone reductase; protein structure initiative, FAD bound, structural genomics, PSI-biology; HET: FAD; 1.75A {Klebsiella pneumoniae subsp}
Probab=66.41 E-value=8.6 Score=35.61 Aligned_cols=46 Identities=11% Similarity=0.077 Sum_probs=25.2
Q ss_pred HHhhhhccCCCCCCCcEEE-EEcCCCccChHH--HHHHHHHHHhCCCeEEEEe
Q 010093 21 SYLIRKLNMGSEIPQLHVF-FFPFMAHGHMIP--IVDMAKLFATRGVKASVIT 70 (518)
Q Consensus 21 ~~~~~~~~m~~~~~~~kIl-~~~~~~~GH~~p--~l~LA~~L~~rGH~Vt~~~ 70 (518)
++-..++.|.+ |||| |..+|-...++- .-.+.+.|.++||+|+++-
T Consensus 12 ~~~t~~~~m~~----MKiLII~aHP~~~S~n~aL~~~~~~~l~~~G~eV~v~D 60 (280)
T 4gi5_A 12 DLGTENLYFQS----MKVLLIYAHPEPRSLNGALKNFAIRHLQQAGHEVQVSD 60 (280)
T ss_dssp ----------C----CEEEEEECCSCTTSHHHHHHHHHHHHHHHTTCEEEEEE
T ss_pred ccCCCcchhhC----CeEEEEEeCCCCccHHHHHHHHHHHHHHHCCCeEEEEE
Confidence 33344555654 7887 666775554444 3356788889999999874
No 84
>1ccw_A Protein (glutamate mutase); coenzyme B12, radical reaction, TIM-barrel rossman-fold, isomerase; HET: CNC TAR; 1.60A {Clostridium cochlearium} SCOP: c.23.6.1 PDB: 1cb7_A* 1b1a_A 1i9c_A* 1be1_A 1fmf_A 1id8_A*
Probab=65.52 E-value=9 Score=31.11 Aligned_cols=39 Identities=10% Similarity=0.060 Sum_probs=34.5
Q ss_pred CCcEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCC
Q 010093 34 PQLHVFFFPFMAHGHMIPIVDMAKLFATRGVKASVITTP 72 (518)
Q Consensus 34 ~~~kIl~~~~~~~GH~~p~l~LA~~L~~rGH~Vt~~~~~ 72 (518)
++.||++.+.++-.|-....-++..|..+|++|......
T Consensus 2 ~~~~vvla~~~~d~HdiG~~~v~~~l~~~G~~Vi~lG~~ 40 (137)
T 1ccw_A 2 EKKTIVLGVIGSDCHAVGNKILDHAFTNAGFNVVNIGVL 40 (137)
T ss_dssp CCCEEEEEEETTCCCCHHHHHHHHHHHHTTCEEEEEEEE
T ss_pred CCCEEEEEeCCCchhHHHHHHHHHHHHHCCCEEEECCCC
Confidence 346899999999999999999999999999999977663
No 85
>1sbz_A Probable aromatic acid decarboxylase; FMN binding, PAD1, UBIX, montreal-kingston bacterial structu genomics initiative, BSGI; HET: FMN; 2.00A {Escherichia coli} SCOP: c.34.1.1
Probab=65.24 E-value=4.1 Score=35.54 Aligned_cols=43 Identities=9% Similarity=0.073 Sum_probs=36.0
Q ss_pred cEEEEEcCCCccChHHHHHHHHHHHhC-CCeEEEEeCCCCccchh
Q 010093 36 LHVFFFPFMAHGHMIPIVDMAKLFATR-GVKASVITTPANAPYVS 79 (518)
Q Consensus 36 ~kIl~~~~~~~GH~~p~l~LA~~L~~r-GH~Vt~~~~~~~~~~~~ 79 (518)
|||++...|+.|-+. ...+.+.|.++ |++|.++.++.....+.
T Consensus 1 ~~IllgvTGsiaa~k-~~~ll~~L~~~~g~~V~vv~T~~A~~fi~ 44 (197)
T 1sbz_A 1 MKLIVGMTGATGAPL-GVALLQALREMPNVETHLVMSKWAKTTIE 44 (197)
T ss_dssp CEEEEEECSSSCHHH-HHHHHHHHHTCTTCEEEEEECHHHHHHHH
T ss_pred CEEEEEEeChHHHHH-HHHHHHHHHhccCCEEEEEECchHHHHhH
Confidence 589988888877765 89999999999 99999999987665554
No 86
>1jkx_A GART;, phosphoribosylglycinamide formyltransferase; purine biosynthesis, anti-cancer agent; HET: 138; 1.60A {Escherichia coli} SCOP: c.65.1.1 PDB: 1cdd_A 1cde_A* 1c2t_A* 1grc_A 1gar_A* 2gar_A 3gar_A 1c3e_A*
Probab=65.16 E-value=71 Score=27.95 Aligned_cols=107 Identities=9% Similarity=0.112 Sum_probs=59.9
Q ss_pred cEEEEEcCCCccChHHHHHHHHHHHhC--CCeEEEEeCCCCccchhhhhhhhhccCCCeEEEEeeCCCccCCCCCCCCcc
Q 010093 36 LHVFFFPFMAHGHMIPIVDMAKLFATR--GVKASVITTPANAPYVSKSVERANELGIEMDVKTIKFPSVEAGLPEGCENL 113 (518)
Q Consensus 36 ~kIl~~~~~~~GH~~p~l~LA~~L~~r--GH~Vt~~~~~~~~~~~~~~~~~~~~~g~~i~~~~ip~~~~~~~l~~~~~~~ 113 (518)
+||+++..+..+ .+.+|.+.+.+. +|+|..+.+............ ..++.+..++ +...
T Consensus 1 ~ri~vl~Sg~gs---nl~ali~~~~~~~~~~~i~~Vis~~~~~~~~~~A~-----~~gIp~~~~~--------~~~~--- 61 (212)
T 1jkx_A 1 MNIVVLISGNGS---NLQAIIDACKTNKIKGTVRAVFSNKADAFGLERAR-----QAGIATHTLI--------ASAF--- 61 (212)
T ss_dssp CEEEEEESSCCH---HHHHHHHHHHTTSSSSEEEEEEESCTTCHHHHHHH-----HTTCEEEECC--------GGGC---
T ss_pred CEEEEEEECCcH---HHHHHHHHHHcCCCCceEEEEEeCCCchHHHHHHH-----HcCCcEEEeC--------cccc---
Confidence 478877777643 367777777765 689876655432222211111 1245444432 0000
Q ss_pred ccccchhhhhhHHHHHHHHHhhHHHHHHHHhhCCCCEEEecCCCc-cHHHHHHHcCCCeEEEecc
Q 010093 114 DAITNEVNKGLIVKFFGATMKLQEPLEQLLQEHKPDCLVADTFFP-WATDAAAKFGIPRLVFHGT 177 (518)
Q Consensus 114 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~~pDlVI~D~~~~-~~~~iA~~lgiP~v~~~~~ 177 (518)
. .. +...+.+.+.+++.+||+||+-.+.. ....+-..+...++-++++
T Consensus 62 ~---~r-------------~~~~~~~~~~l~~~~~Dliv~agy~~il~~~~l~~~~~~~iNiHpS 110 (212)
T 1jkx_A 62 D---SR-------------EAYDRELIHEIDMYAPDVVVLAGFMRILSPAFVSHYAGRLLNIHPS 110 (212)
T ss_dssp S---SH-------------HHHHHHHHHHHGGGCCSEEEESSCCSCCCHHHHHHTTTSEEEEESS
T ss_pred c---ch-------------hhccHHHHHHHHhcCCCEEEEeChhhhCCHHHHhhccCCEEEEccC
Confidence 0 00 12234566778889999999887654 4555556666677776654
No 87
>1kjn_A MTH0777; hypotethical protein, structural genomics, PSI, protein structure initiative; 2.20A {Methanothermobacterthermautotrophicus} SCOP: c.115.1.1
Probab=64.93 E-value=5.4 Score=32.65 Aligned_cols=46 Identities=11% Similarity=0.146 Sum_probs=34.0
Q ss_pred CcEEEE-EcCC-CccChHHHHHHHHHHHhCCCeEEEEeCCCCccchhh
Q 010093 35 QLHVFF-FPFM-AHGHMIPIVDMAKLFATRGVKASVITTPANAPYVSK 80 (518)
Q Consensus 35 ~~kIl~-~~~~-~~GH~~p~l~LA~~L~~rGH~Vt~~~~~~~~~~~~~ 80 (518)
.||+++ +-.| ....+--.+-++..|.++||+|++++.+.....++-
T Consensus 6 ~m~~LilLGCPE~Pvq~p~~lYl~~~Lk~~G~~v~VA~npAAlkLlev 53 (157)
T 1kjn_A 6 TGKALMVLGCPESPVQIPLAIYTSHKLKKKGFRVTVTANPAALRLVQV 53 (157)
T ss_dssp CCEEEEECCCSCSTTHHHHHHHHHHHHHHTTCEEEEEECHHHHHHHHH
T ss_pred ceeeeEEecCCCCcchhhHHHHHHHHHHhcCCeeEEecCHHHHhheec
Confidence 466653 3355 556666688899999999999999999875554443
No 88
>4a1f_A DNAB helicase, replicative DNA helicase; hydrolase, DNA replication, ATPase; HET: FLC; 2.50A {Helicobacter pylori}
Probab=63.51 E-value=9.3 Score=36.51 Aligned_cols=42 Identities=12% Similarity=0.026 Sum_probs=36.1
Q ss_pred EEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCCCCccch
Q 010093 37 HVFFFPFMAHGHMIPIVDMAKLFATRGVKASVITTPANAPYV 78 (518)
Q Consensus 37 kIl~~~~~~~GH~~p~l~LA~~L~~rGH~Vt~~~~~~~~~~~ 78 (518)
-+++..-|+.|-...++.+|..++..|..|.|++.+.....+
T Consensus 48 LiiIaG~pG~GKTt~al~ia~~~a~~g~~Vl~fSlEms~~ql 89 (338)
T 4a1f_A 48 LVIIGARPSMGKTSLMMNMVLSALNDDRGVAVFSLEMSAEQL 89 (338)
T ss_dssp EEEEEECTTSCHHHHHHHHHHHHHHTTCEEEEEESSSCHHHH
T ss_pred EEEEEeCCCCCHHHHHHHHHHHHHHcCCeEEEEeCCCCHHHH
Confidence 467778889999999999999999999999999998655443
No 89
>3mcu_A Dipicolinate synthase, B chain; NESG, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.30A {Bacillus cereus}
Probab=61.13 E-value=8.5 Score=33.82 Aligned_cols=41 Identities=5% Similarity=-0.061 Sum_probs=31.7
Q ss_pred CCcEEEEEcCCCccChHH-HHHHHHHHHhCCCeEEEEeCCCCc
Q 010093 34 PQLHVFFFPFMAHGHMIP-IVDMAKLFATRGVKASVITTPANA 75 (518)
Q Consensus 34 ~~~kIl~~~~~~~GH~~p-~l~LA~~L~~rGH~Vt~~~~~~~~ 75 (518)
+..||++...|+ +..+- ...+.+.|.++|++|.++.++...
T Consensus 4 ~~k~IllgiTGs-iaayk~~~~ll~~L~~~g~eV~vv~T~~A~ 45 (207)
T 3mcu_A 4 KGKRIGFGFTGS-HCTYEEVMPHLEKLIAEGAEVRPVVSYTVQ 45 (207)
T ss_dssp TTCEEEEEECSC-GGGGTTSHHHHHHHHHTTCEEEEEECC---
T ss_pred CCCEEEEEEECh-HHHHHHHHHHHHHHHhCCCEEEEEEehHHH
Confidence 346899888887 44554 789999999999999999997654
No 90
>1g63_A Epidermin modifying enzyme EPID; alpha, beta protein, rossmann like fold, oxidoreductase; HET: FMN; 2.50A {Staphylococcus epidermidis} SCOP: c.34.1.1 PDB: 1g5q_A*
Probab=60.94 E-value=7.3 Score=33.46 Aligned_cols=43 Identities=5% Similarity=0.096 Sum_probs=35.2
Q ss_pred cEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCCCCccchh
Q 010093 36 LHVFFFPFMAHGHMIPIVDMAKLFATRGVKASVITTPANAPYVS 79 (518)
Q Consensus 36 ~kIl~~~~~~~GH~~p~l~LA~~L~~rGH~Vt~~~~~~~~~~~~ 79 (518)
.||++...|+.+=+ -...+.+.|.++|++|.++.++.....+.
T Consensus 3 k~IllgvTGs~aa~-k~~~l~~~L~~~g~~V~vv~T~~A~~fi~ 45 (181)
T 1g63_A 3 GKLLICATASINVI-NINHYIVELKQHFDEVNILFSPSSKNFIN 45 (181)
T ss_dssp CCEEEEECSCGGGG-GHHHHHHHHTTTSSCEEEEECGGGGGTSC
T ss_pred CEEEEEEECHHHHH-HHHHHHHHHHHCCCEEEEEEchhHHHHHH
Confidence 37888888886666 67899999999999999999987665544
No 91
>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}
Probab=60.76 E-value=8.9 Score=35.27 Aligned_cols=34 Identities=9% Similarity=0.158 Sum_probs=26.9
Q ss_pred CCcEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCC
Q 010093 34 PQLHVFFFPFMAHGHMIPIVDMAKLFATRGVKASVITTP 72 (518)
Q Consensus 34 ~~~kIl~~~~~~~GH~~p~l~LA~~L~~rGH~Vt~~~~~ 72 (518)
+|+||++. |+ | .--..|++.|.++||+|+.++-.
T Consensus 2 ~~~~ilVt--Ga-G--~iG~~l~~~L~~~g~~V~~~~r~ 35 (286)
T 3gpi_A 2 SLSKILIA--GC-G--DLGLELARRLTAQGHEVTGLRRS 35 (286)
T ss_dssp CCCCEEEE--CC-S--HHHHHHHHHHHHTTCCEEEEECT
T ss_pred CCCcEEEE--CC-C--HHHHHHHHHHHHCCCEEEEEeCC
Confidence 45788877 34 6 45678999999999999999764
No 92
>2gt1_A Lipopolysaccharide heptosyltransferase-1; GT-B fold; 1.90A {Escherichia coli UTI89} PDB: 2h1f_A* 2h1h_A*
Probab=60.75 E-value=12 Score=35.21 Aligned_cols=45 Identities=13% Similarity=0.107 Sum_probs=40.0
Q ss_pred cEEEEEcCCCccChHHHHHHHHHHHhC--CCeEEEEeCCCCccchhh
Q 010093 36 LHVFFFPFMAHGHMIPIVDMAKLFATR--GVKASVITTPANAPYVSK 80 (518)
Q Consensus 36 ~kIl~~~~~~~GH~~p~l~LA~~L~~r--GH~Vt~~~~~~~~~~~~~ 80 (518)
|||+++-....|++.-..++.++|+++ +.+|++++.+.+.+.+..
T Consensus 1 ~~ILii~~~~iGD~i~~~p~l~~Lk~~~P~a~I~~l~~~~~~~l~~~ 47 (326)
T 2gt1_A 1 MRVLIVKTSSMGDVLHTLPALTDAQQAIPGIKFDWVVEEGFAQIPSW 47 (326)
T ss_dssp CEEEEECCCCHHHHHHHHHHHHHHHHHSTTCEEEEEEEGGGTHHHHT
T ss_pred CeEEEEeccccchHHhHHHHHHHHHHhCCCCEEEEEEehhhhHHHhc
Confidence 589999999999999999999999987 999999999877665543
No 93
>4ds3_A Phosphoribosylglycinamide formyltransferase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.85A {Brucella melitensis BV}
Probab=58.49 E-value=69 Score=28.00 Aligned_cols=41 Identities=17% Similarity=0.213 Sum_probs=28.2
Q ss_pred HHHHHHHhhCCCCEEEecCCCc-cHHHHHHHcCCCeEEEecc
Q 010093 137 EPLEQLLQEHKPDCLVADTFFP-WATDAAAKFGIPRLVFHGT 177 (518)
Q Consensus 137 ~~l~~ll~~~~pDlVI~D~~~~-~~~~iA~~lgiP~v~~~~~ 177 (518)
+++.+.+++.+||+||+-.+.. ....+-..+.-.++-++++
T Consensus 76 ~~~~~~l~~~~~Dliv~agy~~il~~~~l~~~~~~~iNiHpS 117 (209)
T 4ds3_A 76 DAILAALDVLKPDIICLAGYMRLLSGRFIAPYEGRILNIHPS 117 (209)
T ss_dssp HHHHHHHHHHCCSEEEESSCCSCCCHHHHGGGTTCEEEEESS
T ss_pred HHHHHHHHhcCCCEEEEeccccCcCHHHHhhccCCeEEECCc
Confidence 4667778888999999887654 4445555555566666554
No 94
>4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens}
Probab=57.38 E-value=10 Score=35.18 Aligned_cols=34 Identities=15% Similarity=0.333 Sum_probs=25.0
Q ss_pred cEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCCC
Q 010093 36 LHVFFFPFMAHGHMIPIVDMAKLFATRGVKASVITTPA 73 (518)
Q Consensus 36 ~kIl~~~~~~~GH~~p~l~LA~~L~~rGH~Vt~~~~~~ 73 (518)
|||++. |+.|-+ -..|++.|.++||+|+.++-..
T Consensus 1 MkILVT--GatGfI--G~~L~~~L~~~G~~V~~l~R~~ 34 (298)
T 4b4o_A 1 MRVLVG--GGTGFI--GTALTQLLNARGHEVTLVSRKP 34 (298)
T ss_dssp CEEEEE--TTTSHH--HHHHHHHHHHTTCEEEEEESSC
T ss_pred CEEEEE--CCCCHH--HHHHHHHHHHCCCEEEEEECCC
Confidence 677654 444544 4678999999999999987543
No 95
>3n7t_A Macrophage binding protein; seattle structural genomics center for infectious disease, S macrophage, pathogenic fungus, coccidioidomycosis; 2.10A {Coccidioides immitis} SCOP: c.23.16.0
Probab=57.32 E-value=19 Score=32.52 Aligned_cols=38 Identities=13% Similarity=0.159 Sum_probs=28.6
Q ss_pred CcEEEEEcCCCc----------c-ChHHHHHHHHHHHhCCCeEEEEeCC
Q 010093 35 QLHVFFFPFMAH----------G-HMIPIVDMAKLFATRGVKASVITTP 72 (518)
Q Consensus 35 ~~kIl~~~~~~~----------G-H~~p~l~LA~~L~~rGH~Vt~~~~~ 72 (518)
|.||+|+-.... | ...=+..-...|.++|++|+++++.
T Consensus 9 mkkvlvvlt~~~~~~~~~g~~tG~~~~E~~~p~~~l~~aG~~V~~aSp~ 57 (247)
T 3n7t_A 9 PRKALLAITSAHPPFWPDGKRTGLFFSEALHPFNELTAAGFEVDVASET 57 (247)
T ss_dssp CSEEEEECCCCCCBCSTTSCBCCBCHHHHHHHHHHHHHTTCEEEEEESS
T ss_pred CCeEEEEECCCCcccCCCCCCCcccHHHHHHHHHHHHHCCCEEEEEeCC
Confidence 568987766532 2 2444777788999999999999984
No 96
>2lpm_A Two-component response regulator; transcription regulator; NMR {Sinorhizobium meliloti}
Probab=57.19 E-value=8.5 Score=30.63 Aligned_cols=36 Identities=11% Similarity=0.048 Sum_probs=25.5
Q ss_pred HHHHhhCCCCEEEecCCCc--cHHHHHHH---cCCCeEEEe
Q 010093 140 EQLLQEHKPDCLVADTFFP--WATDAAAK---FGIPRLVFH 175 (518)
Q Consensus 140 ~~ll~~~~pDlVI~D~~~~--~~~~iA~~---lgiP~v~~~ 175 (518)
.+++++.+||+||.|..++ -|..+++. .++|+|.++
T Consensus 46 l~~~~~~~~DlvllDi~mP~~~G~el~~~lr~~~ipvI~lT 86 (123)
T 2lpm_A 46 LDIARKGQFDIAIIDVNLDGEPSYPVADILAERNVPFIFAT 86 (123)
T ss_dssp HHHHHHCCSSEEEECSSSSSCCSHHHHHHHHHTCCSSCCBC
T ss_pred HHHHHhCCCCEEEEecCCCCCCHHHHHHHHHcCCCCEEEEe
Confidence 3456678999999998777 45656554 478876653
No 97
>3nb0_A Glycogen [starch] synthase isoform 2; glycogen synthase, glucose-6-phosphate, yeast, allosteric AC transferase; HET: G6P; 2.41A {Saccharomyces cerevisiae} PDB: 3rt1_A* 3nch_A 3naz_A 3o3c_A* 3rsz_A*
Probab=56.29 E-value=18 Score=38.00 Aligned_cols=34 Identities=24% Similarity=0.192 Sum_probs=24.0
Q ss_pred HHhhccCCCccccc---ccCc-hhHHHHHHhCCceecCCc
Q 010093 388 VLILDHEAVGGFVT---HCGW-NSTLEAVAAGVPLVTWPV 423 (518)
Q Consensus 388 ~~lL~~~~~~~~It---HgG~-~s~~eal~~GvP~l~~P~ 423 (518)
.+++..+++ ||. +=|+ .+.+||+++|+|+|+.-.
T Consensus 513 ~~~~~~adv--fV~PS~~EgfGl~~LEAmA~G~PvI~s~~ 550 (725)
T 3nb0_A 513 DEFVRGCHL--GVFPSYYEPWGYTPAECTVMGVPSITTNV 550 (725)
T ss_dssp HHHHHHCSE--EECCCSSBSSCHHHHHHHHTTCCEEEETT
T ss_pred HHHHhhceE--EEeccccCCCCHHHHHHHHcCCCEEEeCC
Confidence 456766555 543 2333 589999999999998654
No 98
>2iz6_A Molybdenum cofactor carrier protein; metal transport; 1.60A {Chlamydomonas reinhardtii} PDB: 2iz5_A 2iz7_A
Probab=56.28 E-value=92 Score=26.33 Aligned_cols=133 Identities=18% Similarity=0.097 Sum_probs=67.8
Q ss_pred hHHhHhhhcCCCCcEEEEecCC-cccCCHHHHHHHHHHHHhCCCcEEEEEcCCCCCCCCCCCCCCChhHHHHHhcCCCcE
Q 010093 302 LECLKWLNSKQPYSVVYVCFGS-LANFTSAQLMEIATGLEASGRNFIWVVSKNKNDGGEGGNEDWLPEGFEKRMEGKGLI 380 (518)
Q Consensus 302 ~~l~~~l~~~~~~~vIyvslGS-~~~~~~~~~~~l~~al~~~~~~~i~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~nv~ 380 (518)
.++-.+|...+ ..+||=|. .. ......++..+.+-++|-+++... . + ++... -...+
T Consensus 35 ~~lg~~La~~g---~~lVsGGg~~G-----im~aa~~gAl~~gG~tigVlP~~~----~-~----~~~~~-----~~~~i 92 (176)
T 2iz6_A 35 NELGKQIATHG---WILLTGGRSLG-----VMHEAMKGAKEAGGTTIGVLPGPD----T-S----EISDA-----VDIPI 92 (176)
T ss_dssp HHHHHHHHHTT---CEEEEECSSSS-----HHHHHHHHHHHTTCCEEEEECC--------------CCTT-----CSEEE
T ss_pred HHHHHHHHHCC---CEEEECCCccC-----HhHHHHHHHHHcCCEEEEEeCchh----h-h----hhccC-----CceeE
Confidence 56667776653 45555554 33 223344555556667777765321 0 1 11100 01234
Q ss_pred eecCccH-HHhh-ccCCCcccccccCchhHHHH---HHhCCceecCCcccccchhHHHHHHhhhcceeeccccccccccC
Q 010093 381 IRGWAPQ-VLIL-DHEAVGGFVTHCGWNSTLEA---VAAGVPLVTWPVAAEQFYNEKMVNEILKIGVGVGIQKWCRIVGD 455 (518)
Q Consensus 381 ~~~~~pq-~~lL-~~~~~~~~ItHgG~~s~~ea---l~~GvP~l~~P~~~DQ~~na~~v~e~~G~G~~l~~~~~~~~~~~ 455 (518)
++...++ +.++ ..++. .++-=||.||..|+ +.+++|++.+|.|. .....+ ..........
T Consensus 93 ~~~~~~~Rk~~m~~~sda-~IvlpGg~GTL~E~~~al~~~kpV~~l~~~~---~~~gfi-~~~~~~~i~~---------- 157 (176)
T 2iz6_A 93 VTGLGSARDNINALSSNV-LVAVGMGPGTAAEVALALKAKKPVVLLGTQP---EAEKFF-TSLDAGLVHV---------- 157 (176)
T ss_dssp ECCCCSSSCCCCGGGCSE-EEEESCCHHHHHHHHHHHHTTCCEEEESCCH---HHHHHH-HHHCTTTEEE----------
T ss_pred EcCCHHHHHHHHHHhCCE-EEEecCCccHHHHHHHHHHhCCcEEEEcCcc---cccccC-ChhhcCeEEE----------
Confidence 4555554 3333 23333 45556888876655 77999999999843 111222 1211111111
Q ss_pred ccChHHHHHHHHHHhc
Q 010093 456 FVKRETIEKAVNEIMV 471 (518)
Q Consensus 456 ~~~~~~l~~av~~ll~ 471 (518)
..+++++.+.+.+.+.
T Consensus 158 ~~~~~e~~~~l~~~~~ 173 (176)
T 2iz6_A 158 AADVAGAIAAVKQLLA 173 (176)
T ss_dssp ESSHHHHHHHHHHHHH
T ss_pred cCCHHHHHHHHHHHHH
Confidence 3477888777776653
No 99
>2i2c_A Probable inorganic polyphosphate/ATP-NAD kinase 1; NADP bound of lmnadk1, transferase; HET: DTA PG4; 1.85A {Listeria monocytogenes egd-e} PDB: 2i1w_A* 2i2a_A* 2i2b_A* 2i29_A* 2i2d_A* 2i2e_A* 3v7u_A* 3v7w_A* 3v7y_A* 3v80_A* 3v8m_A* 3v8n_A* 3v8p_A* 4dy6_A* 2i2f_A* 2q5f_A* 3v8q_A* 3v8r_A*
Probab=56.11 E-value=8.6 Score=35.46 Aligned_cols=29 Identities=10% Similarity=0.047 Sum_probs=24.7
Q ss_pred CCcccccccCchhHHHHHHh------CCceecCCc
Q 010093 395 AVGGFVTHCGWNSTLEAVAA------GVPLVTWPV 423 (518)
Q Consensus 395 ~~~~~ItHgG~~s~~eal~~------GvP~l~~P~ 423 (518)
.++++|.=||-||+.+++.. ++|++++|.
T Consensus 35 ~~D~vv~lGGDGT~l~aa~~~~~~~~~~PilGIn~ 69 (272)
T 2i2c_A 35 EPEIVISIGGDGTFLSAFHQYEERLDEIAFIGIHT 69 (272)
T ss_dssp SCSEEEEEESHHHHHHHHHHTGGGTTTCEEEEEES
T ss_pred CCCEEEEEcCcHHHHHHHHHHhhcCCCCCEEEEeC
Confidence 35669999999999999875 889999875
No 100
>2r8r_A Sensor protein; KDPD, PFAM02702, MCSG, structural genomics, protein structure initiative, midwest center for structural genomics, kinase; 2.30A {Pseudomonas syringae PV}
Probab=55.38 E-value=18 Score=32.28 Aligned_cols=40 Identities=18% Similarity=0.193 Sum_probs=35.8
Q ss_pred CCcEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCCC
Q 010093 34 PQLHVFFFPFMAHGHMIPIVDMAKLFATRGVKASVITTPA 73 (518)
Q Consensus 34 ~~~kIl~~~~~~~GH~~p~l~LA~~L~~rGH~Vt~~~~~~ 73 (518)
-+++|++..-|+.|-..-++.+|..|+++|+.|.++..+.
T Consensus 5 g~l~I~~~~kgGvGKTt~a~~la~~l~~~G~~V~v~d~D~ 44 (228)
T 2r8r_A 5 GRLKVFLGAAPGVGKTYAMLQAAHAQLRQGVRVMAGVVET 44 (228)
T ss_dssp CCEEEEEESSTTSSHHHHHHHHHHHHHHTTCCEEEEECCC
T ss_pred ceEEEEEECCCCCcHHHHHHHHHHHHHHCCCCEEEEEeCC
Confidence 3578999999999999999999999999999998887754
No 101
>3to5_A CHEY homolog; alpha(5)beta(5), chemotaxis, FLIM, phosphorylation, motor AC signaling protein; 1.65A {Vibrio cholerae}
Probab=54.84 E-value=17 Score=29.27 Aligned_cols=37 Identities=22% Similarity=0.339 Sum_probs=27.6
Q ss_pred HHhhCCCCEEEecCCCc--cHHHHHHHc-------CCCeEEEecch
Q 010093 142 LLQEHKPDCLVADTFFP--WATDAAAKF-------GIPRLVFHGTS 178 (518)
Q Consensus 142 ll~~~~pDlVI~D~~~~--~~~~iA~~l-------giP~v~~~~~~ 178 (518)
.+++.+||+||.|..++ -|..+++.+ ++|++.++...
T Consensus 52 ~~~~~~~DlillD~~MP~mdG~el~~~ir~~~~~~~ipvI~lTa~~ 97 (134)
T 3to5_A 52 MLKKGDFDFVVTDWNMPGMQGIDLLKNIRADEELKHLPVLMITAEA 97 (134)
T ss_dssp HHHHHCCSEEEEESCCSSSCHHHHHHHHHHSTTTTTCCEEEEESSC
T ss_pred HHHhCCCCEEEEcCCCCCCCHHHHHHHHHhCCCCCCCeEEEEECCC
Confidence 34556899999999887 577777754 58888876643
No 102
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=54.26 E-value=11 Score=31.05 Aligned_cols=34 Identities=18% Similarity=0.284 Sum_probs=26.5
Q ss_pred CCcEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCC
Q 010093 34 PQLHVFFFPFMAHGHMIPIVDMAKLFATRGVKASVITTP 72 (518)
Q Consensus 34 ~~~kIl~~~~~~~GH~~p~l~LA~~L~~rGH~Vt~~~~~ 72 (518)
+..||+++= .|++- ..+++.|.++||+|+++...
T Consensus 2 ~~~~vlI~G---~G~vG--~~la~~L~~~g~~V~vid~~ 35 (153)
T 1id1_A 2 RKDHFIVCG---HSILA--INTILQLNQRGQNVTVISNL 35 (153)
T ss_dssp CCSCEEEEC---CSHHH--HHHHHHHHHTTCCEEEEECC
T ss_pred CCCcEEEEC---CCHHH--HHHHHHHHHCCCCEEEEECC
Confidence 456888883 35443 78999999999999999874
No 103
>1fmt_A Methionyl-tRNA FMet formyltransferase; initiator tRNA, translation initiation; 2.00A {Escherichia coli} SCOP: b.46.1.1 c.65.1.1 PDB: 2fmt_A* 3r8x_A
Probab=54.01 E-value=40 Score=31.67 Aligned_cols=40 Identities=18% Similarity=0.187 Sum_probs=26.7
Q ss_pred HHHHHHhhCCCCEEEecCCCc-cHHHHHHHcCCCeEEEecc
Q 010093 138 PLEQLLQEHKPDCLVADTFFP-WATDAAAKFGIPRLVFHGT 177 (518)
Q Consensus 138 ~l~~ll~~~~pDlVI~D~~~~-~~~~iA~~lgiP~v~~~~~ 177 (518)
++.+.+++.+||++|+-.+.. ....+-......++-++++
T Consensus 72 ~~~~~l~~~~~Dliv~~~y~~ilp~~il~~~~~g~iNiHpS 112 (314)
T 1fmt_A 72 ENQQLVAELQADVMVVVAYGLILPKAVLEMPRLGCINVHGS 112 (314)
T ss_dssp HHHHHHHHTTCSEEEEESCCSCCCHHHHHSSTTCEEEEESS
T ss_pred HHHHHHHhcCCCEEEEeeccccCCHHHHhhccCCEEEEcCC
Confidence 455667788999999876644 4444445556667776665
No 104
>3kkl_A Probable chaperone protein HSP33; peptidase, heat shock protein, hydrolase, protease, stress response; 2.03A {Saccharomyces cerevisiae} PDB: 3mii_A*
Probab=53.68 E-value=19 Score=32.49 Aligned_cols=39 Identities=13% Similarity=0.251 Sum_probs=27.9
Q ss_pred CCcEEEEEcCCCcc-----------ChHHHHHHHHHHHhCCCeEEEEeCC
Q 010093 34 PQLHVFFFPFMAHG-----------HMIPIVDMAKLFATRGVKASVITTP 72 (518)
Q Consensus 34 ~~~kIl~~~~~~~G-----------H~~p~l~LA~~L~~rGH~Vt~~~~~ 72 (518)
.|.||+|+.....+ ...=+......|.++|++|+++++.
T Consensus 2 ~m~kvlivlt~~~~~~~~~g~~tG~~~~E~~~p~~~l~~aG~~V~iaS~~ 51 (244)
T 3kkl_A 2 TPKRALISLTSYHGPFYKDGAKTGVFVVEILRSFDTFEKHGFEVDFVSET 51 (244)
T ss_dssp -CCEEEEECCCCCCCCSTTSCCCCBCHHHHHHHHHHHHTTTCEEEEEESS
T ss_pred CCCEEEEEECCCCcccCCCCCcCcccHHHHHHHHHHHHHCCCEEEEEeCC
Confidence 35688877665322 2244777788899999999999985
No 105
>3gl9_A Response regulator; beta-sheet, surrounded by alpha helices, BOTH sides, signaling protein; HET: BFD; 1.80A {Thermotoga maritima} SCOP: c.23.1.0 PDB: 3dgf_C 3dge_C
Probab=53.58 E-value=23 Score=27.21 Aligned_cols=38 Identities=26% Similarity=0.396 Sum_probs=27.1
Q ss_pred HHHHhhCCCCEEEecCCCc--cHHHHHHHc-------CCCeEEEecc
Q 010093 140 EQLLQEHKPDCLVADTFFP--WATDAAAKF-------GIPRLVFHGT 177 (518)
Q Consensus 140 ~~ll~~~~pDlVI~D~~~~--~~~~iA~~l-------giP~v~~~~~ 177 (518)
.+.+++.+||+||.|..++ .+..+.+.+ ++|++.++..
T Consensus 39 l~~l~~~~~dlvllD~~~p~~~g~~~~~~l~~~~~~~~~pii~~s~~ 85 (122)
T 3gl9_A 39 LEKLSEFTPDLIVLXIMMPVMDGFTVLKKLQEKEEWKRIPVIVLTAK 85 (122)
T ss_dssp HHHHTTBCCSEEEECSCCSSSCHHHHHHHHHTSTTTTTSCEEEEESC
T ss_pred HHHHHhcCCCEEEEeccCCCCcHHHHHHHHHhcccccCCCEEEEecC
Confidence 3445667899999998666 466666554 5788887764
No 106
>2gt1_A Lipopolysaccharide heptosyltransferase-1; GT-B fold; 1.90A {Escherichia coli UTI89} PDB: 2h1f_A* 2h1h_A*
Probab=53.41 E-value=7.6 Score=36.64 Aligned_cols=136 Identities=9% Similarity=-0.037 Sum_probs=73.4
Q ss_pred CCcEEEEecCCccc---CCHHHHHHHHHHHHhCCCcEEEEEcCCCCCCCCCCCCCCChhHHHHHhcCCCcEeecC--cc-
Q 010093 313 PYSVVYVCFGSLAN---FTSAQLMEIATGLEASGRNFIWVVSKNKNDGGEGGNEDWLPEGFEKRMEGKGLIIRGW--AP- 386 (518)
Q Consensus 313 ~~~vIyvslGS~~~---~~~~~~~~l~~al~~~~~~~i~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~nv~~~~~--~p- 386 (518)
+++.|.+.-|+... .+.+.+.++++.+.+.++++++..+... +.. +-+.+. ...+++.+.+- +.
T Consensus 177 ~~~~i~l~pga~~~~k~wp~~~~~~l~~~L~~~~~~vvl~~g~~~------e~~--~~~~i~--~~~~~~~l~g~~sl~e 246 (326)
T 2gt1_A 177 AGEYAVFLHATTRDDKHWPEEHWRELIGLLADSGIRIKLPWGAPH------EEE--RAKRLA--EGFAYVEVLPKMSLEG 246 (326)
T ss_dssp TTSEEEEECCCSSGGGSCCHHHHHHHHHHTTTTCCEEEECCSSHH------HHH--HHHHHH--TTCTTEEECCCCCHHH
T ss_pred CCCEEEEEeCCCCccccCCHHHHHHHHHHHHHCCCcEEEecCCHH------HHH--HHHHHH--hhCCcccccCCCCHHH
Confidence 45578888887542 6788888888888766777666534321 000 001111 11234434333 22
Q ss_pred HHHhhccCCCcccccccCchhHHHHHHhCCceecC--CcccccchhHHHHHHhhhcc-eeeccccccccccCccChHHHH
Q 010093 387 QVLILDHEAVGGFVTHCGWNSTLEAVAAGVPLVTW--PVAAEQFYNEKMVNEILKIG-VGVGIQKWCRIVGDFVKRETIE 463 (518)
Q Consensus 387 q~~lL~~~~~~~~ItHgG~~s~~eal~~GvP~l~~--P~~~DQ~~na~~v~e~~G~G-~~l~~~~~~~~~~~~~~~~~l~ 463 (518)
-.+++.+ ++++|+.-. |++.=|.+.|+|+|++ |. +..+-. =.|-. ..+.....|. ..++++++.
T Consensus 247 l~ali~~--a~l~I~~DS-G~~HlAaa~g~P~v~lfg~t------~p~~~~-P~~~~~~~~~~~~~cm---~~I~~~~V~ 313 (326)
T 2gt1_A 247 VARVLAG--AKFVVSVDT-GLSHLTAALDRPNITVYGPT------DPGLIG-GYGKNQMVCRAPGNEL---SQLTANAVK 313 (326)
T ss_dssp HHHHHHT--CSEEEEESS-HHHHHHHHTTCCEEEEESSS------CHHHHC-CCSSSEEEEECGGGCG---GGCCHHHHH
T ss_pred HHHHHHh--CCEEEecCC-cHHHHHHHcCCCEEEEECCC------ChhhcC-CCCCCceEecCCcccc---cCCCHHHHH
Confidence 3668877 555999932 3333366699999987 32 111110 11111 1111000010 168999999
Q ss_pred HHHHHHhc
Q 010093 464 KAVNEIMV 471 (518)
Q Consensus 464 ~av~~ll~ 471 (518)
+++.++|+
T Consensus 314 ~~i~~~l~ 321 (326)
T 2gt1_A 314 QFIEENAE 321 (326)
T ss_dssp HHHHHTTT
T ss_pred HHHHHHHH
Confidence 99999996
No 107
>3io3_A DEHA2D07832P; chaperone, membrane traffic, ATPase; HET: ADP; 1.80A {Debaryomyces hansenii}
Probab=53.10 E-value=47 Score=31.68 Aligned_cols=41 Identities=17% Similarity=0.103 Sum_probs=34.1
Q ss_pred CCcEEEEEc-CCCccChHHHHHHHHHHH--hCCCeEEEEeCCCC
Q 010093 34 PQLHVFFFP-FMAHGHMIPIVDMAKLFA--TRGVKASVITTPAN 74 (518)
Q Consensus 34 ~~~kIl~~~-~~~~GH~~p~l~LA~~L~--~rGH~Vt~~~~~~~ 74 (518)
+.++|+|++ -++-|-..-...+|..|+ ++|++|.++.....
T Consensus 16 ~~~~i~~~~gkGGvGKTt~a~~lA~~la~~~~g~~vllid~D~~ 59 (348)
T 3io3_A 16 DSLKWIFVGGKGGVGKTTTSSSVAVQLALAQPNEQFLLISTDPA 59 (348)
T ss_dssp TTCSEEEEECSTTSSHHHHHHHHHHHHHHHCTTSCEEEEECCSS
T ss_pred CCcEEEEEeCCCCCcHHHHHHHHHHHHHHhcCCCeEEEEECCCC
Confidence 345776555 679999999999999999 89999999998743
No 108
>1xmp_A PURE, phosphoribosylaminoimidazole carboxylase; purine biosynthesis, spine, lyase; 1.80A {Bacillus anthracis} SCOP: c.23.8.1
Probab=52.87 E-value=1e+02 Score=25.82 Aligned_cols=147 Identities=12% Similarity=0.118 Sum_probs=78.6
Q ss_pred CcEEEEecCCcccCCHHHHHHHHHHHHhCCCcEEEEEcCCCCCCCCCCCCCCChhHHHHHhcCCCcEeecCccHHHhhcc
Q 010093 314 YSVVYVCFGSLANFTSAQLMEIATGLEASGRNFIWVVSKNKNDGGEGGNEDWLPEGFEKRMEGKGLIIRGWAPQVLILDH 393 (518)
Q Consensus 314 ~~vIyvslGS~~~~~~~~~~~l~~al~~~~~~~i~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~nv~~~~~~pq~~lL~~ 393 (518)
+|.|-|=.||.+ +-...++....++.++..+-..+-+.- ..|+.+....+ + ...
T Consensus 11 ~~~V~IimGS~S--D~~v~~~a~~~L~~~Gi~~dv~V~SaH----------R~p~~l~~~~~-----------~---a~~ 64 (170)
T 1xmp_A 11 KSLVGVIMGSTS--DWETMKYACDILDELNIPYEKKVVSAH----------RTPDYMFEYAE-----------T---ARE 64 (170)
T ss_dssp CCSEEEEESSGG--GHHHHHHHHHHHHHTTCCEEEEECCTT----------TSHHHHHHHHH-----------H---TTT
T ss_pred CCcEEEEECcHH--HHHHHHHHHHHHHHcCCCEEEEEEecc----------CCHHHHHHHHH-----------H---HHh
Confidence 456777778765 566777788888888887644443321 15554322110 0 000
Q ss_pred CCCcccccccCchhHHHHH---HhCCceecCCcccc---cchhHHHHHHh--hhcceee-ccccccccccCccChHHHHH
Q 010093 394 EAVGGFVTHCGWNSTLEAV---AAGVPLVTWPVAAE---QFYNEKMVNEI--LKIGVGV-GIQKWCRIVGDFVKRETIEK 464 (518)
Q Consensus 394 ~~~~~~ItHgG~~s~~eal---~~GvP~l~~P~~~D---Q~~na~~v~e~--~G~G~~l-~~~~~~~~~~~~~~~~~l~~ 464 (518)
..++.+|.=+|.-.-.-.+ ..-+|+|.+|.... ..+--.-++ + .|+.+.. ... +.+.+++.-+..
T Consensus 65 ~g~~ViIa~AG~aa~LpgvvA~~t~~PVIgVP~~~~~l~G~daLlSiv-qmP~GvpVatV~I~-----~a~~~nAallAa 138 (170)
T 1xmp_A 65 RGLKVIIAGAGGAAHLPGMVAAKTNLPVIGVPVQSKALNGLDSLLSIV-QMPGGVPVATVAIG-----KAGSTNAGLLAA 138 (170)
T ss_dssp TTCCEEEEEEESSCCHHHHHHTTCCSCEEEEEECCTTTTTHHHHHHHH-CCCTTCCCEECCSS-----HHHHHHHHHHHH
T ss_pred CCCcEEEEECCchhhhHHHHHhccCCCEEEeeCCCCCCCcHHHHHHHh-cCCCCCeeEEEecC-----CcchHHHHHHHH
Confidence 1133466666643333332 34579999998542 111112232 4 4554322 221 001345555554
Q ss_pred HHHHHhcCChHHHHHHHHHHHHHHHHHHHhcC
Q 010093 465 AVNEIMVGDRAEEMRSRAKALGKMAKRAVENG 496 (518)
Q Consensus 465 av~~ll~~~~~~~~~~~a~~l~~~~~~~~~~~ 496 (518)
.|.. +. |+.++++.+.+++..++.+.+.
T Consensus 139 qIla-~~---d~~l~~kl~~~r~~~~~~v~~~ 166 (170)
T 1xmp_A 139 QILG-SF---HDDIHDALELRREAIEKDVREG 166 (170)
T ss_dssp HHHH-TT---CHHHHHHHHHHHHHHHHHHHC-
T ss_pred HHHc-cC---CHHHHHHHHHHHHHHHHHHHhc
Confidence 4442 33 6699999999999998776653
No 109
>3mc3_A DSRE/DSRF-like family protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MLY MSE; 1.49A {Sulfolobus solfataricus}
Probab=52.80 E-value=28 Score=27.99 Aligned_cols=43 Identities=12% Similarity=0.034 Sum_probs=31.2
Q ss_pred CcEEE-EEcCC--CccChHHHHHHHHHHHhCCCeEEEEeCCCCccc
Q 010093 35 QLHVF-FFPFM--AHGHMIPIVDMAKLFATRGVKASVITTPANAPY 77 (518)
Q Consensus 35 ~~kIl-~~~~~--~~GH~~p~l~LA~~L~~rGH~Vt~~~~~~~~~~ 77 (518)
+.|++ ++..+ ........+.+|...+..||+|+++-..+-...
T Consensus 15 ~~kl~ii~~sgP~~~~~~~~al~lA~~A~a~g~eV~vFf~~dGV~~ 60 (134)
T 3mc3_A 15 XXXILIVVTHGPEDLDRTYAPLFMASISASMEYETSVFFMIXGPXL 60 (134)
T ss_dssp CCEEEEEECCCGGGTHHHHHHHHHHHHHHHTTCEEEEEECTTGGGG
T ss_pred cceEEEEEccCCCCHHHHHHHHHHHHHHHHCCCCEEEEEEeCcHHH
Confidence 45665 34444 456777888999999999999998888654443
No 110
>2vo1_A CTP synthase 1; pyrimidine biosynthesis, glutamine amidotransferase, phosphorylation, amidotransferase, cytidine 5-prime triphos synthetase, UTP; 2.8A {Homo sapiens} SCOP: c.37.1.10 PDB: 3ihl_A*
Probab=52.67 E-value=14 Score=33.55 Aligned_cols=43 Identities=9% Similarity=0.114 Sum_probs=35.3
Q ss_pred CCcEEEEEcCC---CccChHHHHHHHHHHHhCCCeEEEEeCCCCcc
Q 010093 34 PQLHVFFFPFM---AHGHMIPIVDMAKLFATRGVKASVITTPANAP 76 (518)
Q Consensus 34 ~~~kIl~~~~~---~~GH~~p~l~LA~~L~~rGH~Vt~~~~~~~~~ 76 (518)
.+||.+|++.+ +.|-=.-...|+..|..||+.||+.=-+++.+
T Consensus 21 ~~~KyIfVTGGVvS~lGKGi~aaSlg~lLk~~G~~Vt~~K~DPYlN 66 (295)
T 2vo1_A 21 QSMKYILVTGGVISGIGKGIIASSVGTILKSCGLHVTSIKIDPYIN 66 (295)
T ss_dssp CCCEEEEEEECSSSSSSHHHHHHHHHHHHHHTTCCEEEEEEECSSC
T ss_pred ccceEEEEcCCcccccccHHHHHHHHHHHHHCCCcceeeeccccee
Confidence 45899999866 66677888999999999999999997666544
No 111
>2q6t_A DNAB replication FORK helicase; hydrolase; 2.90A {Thermus aquaticus}
Probab=52.67 E-value=33 Score=34.00 Aligned_cols=41 Identities=17% Similarity=0.066 Sum_probs=34.2
Q ss_pred EEEEEcCCCccChHHHHHHHHHHHh-CCCeEEEEeCCCCccc
Q 010093 37 HVFFFPFMAHGHMIPIVDMAKLFAT-RGVKASVITTPANAPY 77 (518)
Q Consensus 37 kIl~~~~~~~GH~~p~l~LA~~L~~-rGH~Vt~~~~~~~~~~ 77 (518)
-+++.--|+.|-...++.+|...+. .|..|.+++.+.....
T Consensus 202 l~ii~G~pg~GKT~lal~ia~~~a~~~g~~vl~~slE~~~~~ 243 (444)
T 2q6t_A 202 LNIIAARPAMGKTAFALTIAQNAALKEGVGVGIYSLEMPAAQ 243 (444)
T ss_dssp EEEEEECTTSCHHHHHHHHHHHHHHTTCCCEEEEESSSCHHH
T ss_pred EEEEEeCCCCCHHHHHHHHHHHHHHhCCCeEEEEECCCCHHH
Confidence 4677778899999999999999987 4899999999865443
No 112
>3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, oxidoredu PSI-2; HET: MSE; 1.90A {Pseudomonas putida}
Probab=52.57 E-value=8.7 Score=36.07 Aligned_cols=39 Identities=18% Similarity=0.275 Sum_probs=28.9
Q ss_pred cCCCCCCCcEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeC
Q 010093 28 NMGSEIPQLHVFFFPFMAHGHMIPIVDMAKLFATRGVKASVITT 71 (518)
Q Consensus 28 ~m~~~~~~~kIl~~~~~~~GH~~p~l~LA~~L~~rGH~Vt~~~~ 71 (518)
+|..+..++||.|+=.+..| ..+|+.|+++||+|++...
T Consensus 2 ~m~~~~~~~~IgiIG~G~mG-----~~~A~~l~~~G~~V~~~dr 40 (306)
T 3l6d_A 2 SLSDESFEFDVSVIGLGAMG-----TIMAQVLLKQGKRVAIWNR 40 (306)
T ss_dssp CCCCCCCSCSEEEECCSHHH-----HHHHHHHHHTTCCEEEECS
T ss_pred CCCcccCCCeEEEECCCHHH-----HHHHHHHHHCCCEEEEEeC
Confidence 45544567899998655444 5789999999999988743
No 113
>4egb_A DTDP-glucose 4,6-dehydratase; rhamnose pathway, center for structural genomics of infectio diseases, csgid, niaid; HET: NAD SUC; 3.00A {Bacillus anthracis}
Probab=52.30 E-value=87 Score=29.22 Aligned_cols=34 Identities=6% Similarity=0.053 Sum_probs=21.4
Q ss_pred CCcEEEEEcCCCccChHHHHHHHHHHHhCC--CeEEEEeC
Q 010093 34 PQLHVFFFPFMAHGHMIPIVDMAKLFATRG--VKASVITT 71 (518)
Q Consensus 34 ~~~kIl~~~~~~~GH~~p~l~LA~~L~~rG--H~Vt~~~~ 71 (518)
++|+|++. |+.|.+ -..|++.|.++| |+|+....
T Consensus 23 ~~~~vlVt--GatG~i--G~~l~~~L~~~g~~~~v~~~~~ 58 (346)
T 4egb_A 23 NAMNILVT--GGAGFI--GSNFVHYMLQSYETYKIINFDA 58 (346)
T ss_dssp -CEEEEEE--TTTSHH--HHHHHHHHHHHCTTEEEEEEEC
T ss_pred CCCeEEEE--CCccHH--HHHHHHHHHhhCCCcEEEEEec
Confidence 56787665 333433 468899999999 45554443
No 114
>2xj4_A MIPZ; replication, cell division, ATPase, WACA; 1.60A {Caulobacter vibrioides} PDB: 2xj9_A* 2xit_A
Probab=52.29 E-value=15 Score=33.92 Aligned_cols=40 Identities=18% Similarity=0.150 Sum_probs=31.5
Q ss_pred CCcEEEEEc--CCCccChHHHHHHHHHHHhCCCeEEEEeCCC
Q 010093 34 PQLHVFFFP--FMAHGHMIPIVDMAKLFATRGVKASVITTPA 73 (518)
Q Consensus 34 ~~~kIl~~~--~~~~GH~~p~l~LA~~L~~rGH~Vt~~~~~~ 73 (518)
+|+|++.+. -++-|-..-...||..|+++|+.|.++=.+.
T Consensus 2 ~M~kvI~v~s~KGGvGKTT~a~nLA~~La~~G~~VlliD~D~ 43 (286)
T 2xj4_A 2 AETRVIVVGNEKGGAGKSTIAVHLVTALLYGGAKVAVIDLDL 43 (286)
T ss_dssp --CEEEEECCSSSCTTHHHHHHHHHHHHHHTTCCEEEEECCT
T ss_pred CCCeEEEEEcCCCCCCHHHHHHHHHHHHHHCCCcEEEEECCC
Confidence 467766544 4688999999999999999999999986655
No 115
>1meo_A Phosophoribosylglycinamide formyltransferase; purine biosynthesis; 1.72A {Homo sapiens} SCOP: c.65.1.1 PDB: 1njs_A* 1rbm_A* 1rbq_A* 1rby_A* 1rbz_A* 1rc0_A* 1rc1_A* 1zly_A* 1zlx_A* 1mej_B 1men_A*
Probab=51.65 E-value=1.2e+02 Score=26.36 Aligned_cols=41 Identities=17% Similarity=0.235 Sum_probs=28.0
Q ss_pred HHHHHHHhhCCCCEEEecCCCc-cHHHHHHHcCCCeEEEecc
Q 010093 137 EPLEQLLQEHKPDCLVADTFFP-WATDAAAKFGIPRLVFHGT 177 (518)
Q Consensus 137 ~~l~~ll~~~~pDlVI~D~~~~-~~~~iA~~lgiP~v~~~~~ 177 (518)
+.+.+.++..+||+||+-.+.. ....+-..+...++-++++
T Consensus 69 ~~~~~~l~~~~~Dliv~a~y~~il~~~~l~~~~~~~iNiHpS 110 (209)
T 1meo_A 69 SAIDLVLEEFSIDIVCLAGFMRILSGPFVQKWNGKMLNIHPS 110 (209)
T ss_dssp HHHHHHHHHTTCCEEEEESCCSCCCHHHHHHTTTSEEEEESS
T ss_pred HHHHHHHHhcCCCEEEEcchhhhCCHHHHhhhcCCEEEEccC
Confidence 3566778889999999876654 4444555666667766654
No 116
>3nbm_A PTS system, lactose-specific IIBC components; PTS_IIB_LACTOSE, phosphoenolpyruvate:carbohydrate system, P- phosphorylation; HET: MSE; 1.30A {Streptococcus pneumoniae}
Probab=50.96 E-value=23 Score=27.38 Aligned_cols=37 Identities=8% Similarity=-0.071 Sum_probs=29.7
Q ss_pred CCcEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEe
Q 010093 34 PQLHVFFFPFMAHGHMIPIVDMAKLFATRGVKASVIT 70 (518)
Q Consensus 34 ~~~kIl~~~~~~~GH~~p~l~LA~~L~~rGH~Vt~~~ 70 (518)
++|||+++|..+.|--.-...+=++..++|.+|.+..
T Consensus 5 ~~mkIlL~C~aGmSTsllv~km~~~a~~~gi~v~i~a 41 (108)
T 3nbm_A 5 KELKVLVLCAGSGTSAQLANAINEGANLTEVRVIANS 41 (108)
T ss_dssp CCEEEEEEESSSSHHHHHHHHHHHHHHHHTCSEEEEE
T ss_pred cCceEEEECCCCCCHHHHHHHHHHHHHHCCCceEEEE
Confidence 6799999998888777766777777777899998855
No 117
>1jx7_A Hypothetical protein YCHN; NEW fold, hexamer, structural genomics, BSGC structure funded by NIH, protein structure initiative, PSI; 2.80A {Escherichia coli} SCOP: c.114.1.1
Probab=50.03 E-value=19 Score=27.77 Aligned_cols=40 Identities=3% Similarity=-0.007 Sum_probs=28.1
Q ss_pred cEEEE-EcCC--CccChHHHHHHHHHHHhC-CC-eEEEEeCCCCc
Q 010093 36 LHVFF-FPFM--AHGHMIPIVDMAKLFATR-GV-KASVITTPANA 75 (518)
Q Consensus 36 ~kIl~-~~~~--~~GH~~p~l~LA~~L~~r-GH-~Vt~~~~~~~~ 75 (518)
+|++| +..+ +.......+.+|..+++. || +|+++-..+..
T Consensus 2 ~k~~ii~~~~p~~~~~~~~al~~a~~~~~~~g~~~v~vff~~dgV 46 (117)
T 1jx7_A 2 QKIVIVANGAPYGSESLFNSLRLAIALREQESNLDLRLFLMSDAV 46 (117)
T ss_dssp CEEEEEECCCTTTCSHHHHHHHHHHHHHHHCTTCEEEEEECGGGG
T ss_pred cEEEEEEcCCCCCcHHHHHHHHHHHHHHhcCCCccEEEEEEchHH
Confidence 45553 3333 345566789999999999 99 99988876543
No 118
>2a5l_A Trp repressor binding protein WRBA; APC5760, PA0949, protein structure initiative, PSI, structural genomics; 1.70A {Pseudomonas aeruginosa} SCOP: c.23.5.8 PDB: 1zwk_A 1zwl_A*
Probab=50.01 E-value=19 Score=30.88 Aligned_cols=39 Identities=21% Similarity=0.345 Sum_probs=26.5
Q ss_pred CCcEEEEEcCCCccChHHHH-HHHHHHHhCCCeEEEEeCC
Q 010093 34 PQLHVFFFPFMAHGHMIPIV-DMAKLFATRGVKASVITTP 72 (518)
Q Consensus 34 ~~~kIl~~~~~~~GH~~p~l-~LA~~L~~rGH~Vt~~~~~ 72 (518)
.|+||+++-....|+..-+. .+++.|.+.|++|.++.-.
T Consensus 4 ~M~kilii~~S~~g~T~~la~~i~~~l~~~g~~v~~~~l~ 43 (200)
T 2a5l_A 4 SSPYILVLYYSRHGATAEMARQIARGVEQGGFEARVRTVP 43 (200)
T ss_dssp -CCEEEEEECCSSSHHHHHHHHHHHHHHHTTCEEEEEBCC
T ss_pred CcceEEEEEeCCCChHHHHHHHHHHHHhhCCCEEEEEEhh
Confidence 35788866655577765544 4567777789999887654
No 119
>3bgw_A DNAB-like replicative helicase; ATPase, replication; 3.91A {Bacillus phage SPP1}
Probab=49.77 E-value=24 Score=35.08 Aligned_cols=43 Identities=9% Similarity=-0.050 Sum_probs=36.8
Q ss_pred cEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCCCCccch
Q 010093 36 LHVFFFPFMAHGHMIPIVDMAKLFATRGVKASVITTPANAPYV 78 (518)
Q Consensus 36 ~kIl~~~~~~~GH~~p~l~LA~~L~~rGH~Vt~~~~~~~~~~~ 78 (518)
--+++..-|+.|=...++.+|...+.+|..|.+++.+...+.+
T Consensus 198 ~liiIaG~pG~GKTtlal~ia~~~a~~g~~vl~fSlEms~~ql 240 (444)
T 3bgw_A 198 NFVLIAARPSMGKTAFALKQAKNMSDNDDVVNLHSLEMGKKEN 240 (444)
T ss_dssp CEEEEEECSSSSHHHHHHHHHHHHHHTTCEEEEECSSSCTTHH
T ss_pred cEEEEEeCCCCChHHHHHHHHHHHHHcCCEEEEEECCCCHHHH
Confidence 3577888899999999999999999999999999998655443
No 120
>2yxb_A Coenzyme B12-dependent mutase; alpha/beta, structural genomics, NPPSFA, national project on structural and functional analyses; 1.80A {Aeropyrum pernix}
Probab=49.27 E-value=15 Score=30.83 Aligned_cols=40 Identities=13% Similarity=0.081 Sum_probs=35.6
Q ss_pred CCcEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCCC
Q 010093 34 PQLHVFFFPFMAHGHMIPIVDMAKLFATRGVKASVITTPA 73 (518)
Q Consensus 34 ~~~kIl~~~~~~~GH~~p~l~LA~~L~~rGH~Vt~~~~~~ 73 (518)
++.||++.+.++-.|-....-++..|..+|++|.+.....
T Consensus 17 ~~~~vlla~~~gd~HdiG~~~va~~l~~~G~eVi~lG~~~ 56 (161)
T 2yxb_A 17 RRYKVLVAKMGLDGHDRGAKVVARALRDAGFEVVYTGLRQ 56 (161)
T ss_dssp CSCEEEEEEESSSSCCHHHHHHHHHHHHTTCEEECCCSBC
T ss_pred CCCEEEEEeCCCCccHHHHHHHHHHHHHCCCEEEECCCCC
Confidence 4679999999999999999999999999999999886643
No 121
>3kcq_A Phosphoribosylglycinamide formyltransferase; structural genomics, niaid, seattle structural center for infectious disease, ssgcid; 2.20A {Anaplasma phagocytophilum} SCOP: c.65.1.0
Probab=48.78 E-value=1.2e+02 Score=26.67 Aligned_cols=41 Identities=17% Similarity=0.293 Sum_probs=29.1
Q ss_pred HHHHHHHhhCCCCEEEecCCCc-cHHHHHHHcCCCeEEEecc
Q 010093 137 EPLEQLLQEHKPDCLVADTFFP-WATDAAAKFGIPRLVFHGT 177 (518)
Q Consensus 137 ~~l~~ll~~~~pDlVI~D~~~~-~~~~iA~~lgiP~v~~~~~ 177 (518)
+++.+.+++.++|+||+-.+.. ....+-..+.-.++-++++
T Consensus 72 ~~~~~~L~~~~~Dlivlagy~~IL~~~~l~~~~~~~iNiHpS 113 (215)
T 3kcq_A 72 EHISTVLREHDVDLVCLAGFMSILPEKFVTDWHHKIINIHPS 113 (215)
T ss_dssp HHHHHHHHHTTCSEEEESSCCSCCCHHHHHHTTTSEEEEESS
T ss_pred HHHHHHHHHhCCCEEEEeCCceEeCHHHHhhccCCeEEECcc
Confidence 4667778889999999887654 4555556666667766654
No 122
>2l2q_A PTS system, cellobiose-specific IIB component (CE; cellobiose-specific phosphotransferase IIB component, struct genomics; NMR {Borrelia burgdorferi}
Probab=48.15 E-value=25 Score=27.09 Aligned_cols=38 Identities=5% Similarity=0.142 Sum_probs=30.1
Q ss_pred CCcEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeC
Q 010093 34 PQLHVFFFPFMAHGHMIPIVDMAKLFATRGVKASVITT 71 (518)
Q Consensus 34 ~~~kIl~~~~~~~GH~~p~l~LA~~L~~rGH~Vt~~~~ 71 (518)
+.|||+++|..+.|+-.-...+-+.+.++|.++.+-..
T Consensus 3 ~~mkIlvvC~~G~~TSll~~kl~~~~~~~gi~~~i~~~ 40 (109)
T 2l2q_A 3 GSMNILLVCGAGMSTSMLVQRIEKYAKSKNINATIEAI 40 (109)
T ss_dssp CCEEEEEESSSSCSSCHHHHHHHHHHHHHTCSEEEEEE
T ss_pred CceEEEEECCChHhHHHHHHHHHHHHHHCCCCeEEEEe
Confidence 45899999999888887777888888889987665443
No 123
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=48.08 E-value=12 Score=30.19 Aligned_cols=34 Identities=9% Similarity=0.098 Sum_probs=25.3
Q ss_pred CCcEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCC
Q 010093 34 PQLHVFFFPFMAHGHMIPIVDMAKLFATRGVKASVITTP 72 (518)
Q Consensus 34 ~~~kIl~~~~~~~GH~~p~l~LA~~L~~rGH~Vt~~~~~ 72 (518)
+|+||+++=. |. --..+|+.|.++||+|+++...
T Consensus 5 ~~~~v~I~G~---G~--iG~~la~~L~~~g~~V~~id~~ 38 (141)
T 3llv_A 5 GRYEYIVIGS---EA--AGVGLVRELTAAGKKVLAVDKS 38 (141)
T ss_dssp -CCSEEEECC---SH--HHHHHHHHHHHTTCCEEEEESC
T ss_pred CCCEEEEECC---CH--HHHHHHHHHHHCCCeEEEEECC
Confidence 3567888744 44 3568999999999999988763
No 124
>3tqq_A Methionyl-tRNA formyltransferase; protein synthesis; 2.00A {Coxiella burnetii}
Probab=47.08 E-value=23 Score=33.34 Aligned_cols=33 Identities=12% Similarity=0.132 Sum_probs=25.1
Q ss_pred cEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCCC
Q 010093 36 LHVFFFPFMAHGHMIPIVDMAKLFATRGVKASVITTPA 73 (518)
Q Consensus 36 ~kIl~~~~~~~GH~~p~l~LA~~L~~rGH~Vt~~~~~~ 73 (518)
|||+|+-.+..+ .+..++|.++||+|..+.+..
T Consensus 3 mrivf~Gtp~fa-----~~~L~~L~~~~~~v~~Vvt~p 35 (314)
T 3tqq_A 3 LKIVFAGTPQFA-----VPTLRALIDSSHRVLAVYTQP 35 (314)
T ss_dssp CEEEEEECSGGG-----HHHHHHHHHSSSEEEEEECCC
T ss_pred cEEEEECCCHHH-----HHHHHHHHHCCCeEEEEEeCC
Confidence 699999877554 355688889999998776643
No 125
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=46.45 E-value=14 Score=34.47 Aligned_cols=33 Identities=12% Similarity=0.177 Sum_probs=25.0
Q ss_pred CCcEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeC
Q 010093 34 PQLHVFFFPFMAHGHMIPIVDMAKLFATRGVKASVITT 71 (518)
Q Consensus 34 ~~~kIl~~~~~~~GH~~p~l~LA~~L~~rGH~Vt~~~~ 71 (518)
+||||+|+=.+..| ..+|..|.++||+|+++..
T Consensus 2 ~~m~i~iiG~G~~G-----~~~a~~l~~~g~~V~~~~r 34 (316)
T 2ew2_A 2 NAMKIAIAGAGAMG-----SRLGIMLHQGGNDVTLIDQ 34 (316)
T ss_dssp --CEEEEECCSHHH-----HHHHHHHHHTTCEEEEECS
T ss_pred CCCeEEEECcCHHH-----HHHHHHHHhCCCcEEEEEC
Confidence 46799988665544 5678999999999999865
No 126
>1tvm_A PTS system, galactitol-specific IIB component; phosphotransferase system (PTS), P-loop; NMR {Escherichia coli}
Probab=46.19 E-value=44 Score=25.89 Aligned_cols=38 Identities=8% Similarity=-0.002 Sum_probs=31.1
Q ss_pred CCCcEEEEEcCCCccChHH-HHHHHHHHHhCCCeEEEEe
Q 010093 33 IPQLHVFFFPFMAHGHMIP-IVDMAKLFATRGVKASVIT 70 (518)
Q Consensus 33 ~~~~kIl~~~~~~~GH~~p-~l~LA~~L~~rGH~Vt~~~ 70 (518)
.+|.||+++|..+.|.-.- ...|-+.+.++|.++.+-.
T Consensus 19 ~~~kkIlvvC~sG~gTS~ll~~kl~~~~~~~gi~~~V~~ 57 (113)
T 1tvm_A 19 GSKRKIIVACGGAVATSTMAAEEIKELCQSHNIPVELIQ 57 (113)
T ss_dssp CSSEEEEEESCSCSSHHHHHHHHHHHHHHHTTCCEEEEE
T ss_pred ccccEEEEECCCCHHHHHHHHHHHHHHHHHcCCeEEEEE
Confidence 4678999999999999885 6778888889999865544
No 127
>3kjh_A CO dehydrogenase/acetyl-COA synthase complex, accessory protein COOC; Zn-bound dimer, nickel binding protein, ATPase; 1.90A {Carboxydothermus hydrogenoformans} PDB: 3kjg_A* 3kje_A 3kji_A*
Probab=46.04 E-value=15 Score=32.77 Aligned_cols=38 Identities=11% Similarity=0.028 Sum_probs=33.4
Q ss_pred cEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCCC
Q 010093 36 LHVFFFPFMAHGHMIPIVDMAKLFATRGVKASVITTPA 73 (518)
Q Consensus 36 ~kIl~~~~~~~GH~~p~l~LA~~L~~rGH~Vt~~~~~~ 73 (518)
|||+|..-++-|=..-...||..|+++|++|.++=...
T Consensus 1 mkI~vs~kGGvGKTt~a~~LA~~la~~g~~VlliD~D~ 38 (254)
T 3kjh_A 1 MKLAVAGKGGVGKTTVAAGLIKIMASDYDKIYAVDGDP 38 (254)
T ss_dssp CEEEEECSSSHHHHHHHHHHHHHHTTTCSCEEEEEECT
T ss_pred CEEEEecCCCCCHHHHHHHHHHHHHHCCCeEEEEeCCC
Confidence 57888778899999999999999999999999986554
No 128
>2hy5_A Putative sulfurtransferase DSRE; DSRE, DSRF, sulfur, structural genomics, PSI, protein initiative, berkeley structural genomics center, BSGC, TRAN; 1.72A {Allochromatium vinosum} SCOP: c.114.1.1 PDB: 2hyb_A
Probab=45.81 E-value=29 Score=27.65 Aligned_cols=39 Identities=10% Similarity=-0.074 Sum_probs=27.7
Q ss_pred cEEE-EEcCCCcc--ChHHHHHHHHHHHhCCCeE-EEEeCCCC
Q 010093 36 LHVF-FFPFMAHG--HMIPIVDMAKLFATRGVKA-SVITTPAN 74 (518)
Q Consensus 36 ~kIl-~~~~~~~G--H~~p~l~LA~~L~~rGH~V-t~~~~~~~ 74 (518)
||++ ++..+.+| .....+.+|..+.+.||+| +++-..+-
T Consensus 1 mk~~iiv~~~p~~~~~~~~al~~a~a~~~~g~~v~~vff~~dG 43 (130)
T 2hy5_A 1 MKFALQINEGPYQHQASDSAYQFAKAALEKGHEIFRVFFYHDG 43 (130)
T ss_dssp CEEEEEECSCTTTSTHHHHHHHHHHHHHHTTCEEEEEEECGGG
T ss_pred CEEEEEEeCCCCCcHHHHHHHHHHHHHHhcCCeeCEEEEechH
Confidence 3554 44454454 4566789999999999999 88877543
No 129
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=45.77 E-value=25 Score=27.74 Aligned_cols=33 Identities=15% Similarity=0.216 Sum_probs=24.1
Q ss_pred CCcEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeC
Q 010093 34 PQLHVFFFPFMAHGHMIPIVDMAKLFATRGVKASVITT 71 (518)
Q Consensus 34 ~~~kIl~~~~~~~GH~~p~l~LA~~L~~rGH~Vt~~~~ 71 (518)
+.|||+++= .|.+ -..+|+.|.++||+|+++..
T Consensus 3 ~~m~i~IiG---~G~i--G~~~a~~L~~~g~~v~~~d~ 35 (140)
T 1lss_A 3 HGMYIIIAG---IGRV--GYTLAKSLSEKGHDIVLIDI 35 (140)
T ss_dssp --CEEEEEC---CSHH--HHHHHHHHHHTTCEEEEEES
T ss_pred CCCEEEEEC---CCHH--HHHHHHHHHhCCCeEEEEEC
Confidence 347888882 2555 34689999999999998865
No 130
>3t6k_A Response regulator receiver; flavodoxin-like, structural genomics, joint center for struc genomics, JCSG, protein structure initiative; HET: MSE; 1.86A {Chloroflexus aurantiacus} SCOP: c.23.1.0
Probab=45.50 E-value=37 Score=26.66 Aligned_cols=38 Identities=21% Similarity=0.434 Sum_probs=26.1
Q ss_pred HHHhhCCCCEEEecCCCc--cHHHHHHHc-------CCCeEEEecch
Q 010093 141 QLLQEHKPDCLVADTFFP--WATDAAAKF-------GIPRLVFHGTS 178 (518)
Q Consensus 141 ~ll~~~~pDlVI~D~~~~--~~~~iA~~l-------giP~v~~~~~~ 178 (518)
+.+...+||+||+|..++ .+..+.+.+ ++|++.++...
T Consensus 42 ~~~~~~~~dlvl~D~~lp~~~g~~~~~~lr~~~~~~~~pii~~t~~~ 88 (136)
T 3t6k_A 42 QQIYKNLPDALICDVLLPGIDGYTLCKRVRQHPLTKTLPILMLTAQG 88 (136)
T ss_dssp HHHHHSCCSEEEEESCCSSSCHHHHHHHHHHSGGGTTCCEEEEECTT
T ss_pred HHHHhCCCCEEEEeCCCCCCCHHHHHHHHHcCCCcCCccEEEEecCC
Confidence 345567899999998765 355555443 57888877643
No 131
>1p3y_1 MRSD protein; flavoprotein, FMN, rossmann fold, HFCD family, oxdidative decarboxylation, cystein, lantibiotics, mersacidin, oxidore; HET: FAD; 2.54A {Bacillus SP} SCOP: c.34.1.1
Probab=45.28 E-value=9 Score=33.29 Aligned_cols=44 Identities=9% Similarity=-0.017 Sum_probs=35.9
Q ss_pred CcEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCCCCccchh
Q 010093 35 QLHVFFFPFMAHGHMIPIVDMAKLFATRGVKASVITTPANAPYVS 79 (518)
Q Consensus 35 ~~kIl~~~~~~~GH~~p~l~LA~~L~~rGH~Vt~~~~~~~~~~~~ 79 (518)
..||++...|+.|-+. ...+.+.|.++|++|.++.++.....+.
T Consensus 8 ~k~IllgvTGs~aa~k-~~~l~~~L~~~g~~V~vv~T~~A~~fi~ 51 (194)
T 1p3y_1 8 DKKLLIGICGSISSVG-ISSYLLYFKSFFKEIRVVMTKTAEDLIP 51 (194)
T ss_dssp GCEEEEEECSCGGGGG-THHHHHHHTTTSSEEEEEECHHHHHHSC
T ss_pred CCEEEEEEECHHHHHH-HHHHHHHHHHCCCEEEEEEchhHHHHHH
Confidence 3589988888877665 7899999999999999999986655443
No 132
>3rfo_A Methionyl-tRNA formyltransferase; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta structure, cytosol; HET: PGE; 2.40A {Bacillus anthracis}
Probab=44.88 E-value=25 Score=33.13 Aligned_cols=36 Identities=14% Similarity=0.158 Sum_probs=27.4
Q ss_pred CCCcEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCCC
Q 010093 33 IPQLHVFFFPFMAHGHMIPIVDMAKLFATRGVKASVITTPA 73 (518)
Q Consensus 33 ~~~~kIl~~~~~~~GH~~p~l~LA~~L~~rGH~Vt~~~~~~ 73 (518)
.+||||+|+-.+..+ ....++|.++||+|..+.+..
T Consensus 2 ~~mmrIvf~Gtp~fa-----~~~L~~L~~~~~~v~~Vvt~p 37 (317)
T 3rfo_A 2 NAMIKVVFMGTPDFS-----VPVLRRLIEDGYDVIGVVTQP 37 (317)
T ss_dssp CTTSEEEEECCSTTH-----HHHHHHHHHTTCEEEEEECCC
T ss_pred CCceEEEEEeCCHHH-----HHHHHHHHHCCCcEEEEEeCC
Confidence 378999999877544 355678888999998776654
No 133
>1y80_A Predicted cobalamin binding protein; corrinoid, factor IIIM, methyl transferase, structural genomics, PSI, protein structure initiative; HET: B1M; 1.70A {Moorella thermoacetica}
Probab=44.31 E-value=25 Score=30.68 Aligned_cols=41 Identities=10% Similarity=-0.003 Sum_probs=36.4
Q ss_pred CCcEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCCCC
Q 010093 34 PQLHVFFFPFMAHGHMIPIVDMAKLFATRGVKASVITTPAN 74 (518)
Q Consensus 34 ~~~kIl~~~~~~~GH~~p~l~LA~~L~~rGH~Vt~~~~~~~ 74 (518)
+..+|++.+.++-.|-....-++..|..+|++|.++....-
T Consensus 87 ~~~~vll~~~~gd~H~iG~~~va~~l~~~G~~v~~LG~~vp 127 (210)
T 1y80_A 87 SVGKIVLGTVKGDLHDIGKNLVAMMLESGGFTVYNLGVDIE 127 (210)
T ss_dssp CCCEEEEEEBTTCCCCHHHHHHHHHHHHTTCEEEECCSSBC
T ss_pred CCCEEEEEeCCCcccHHHHHHHHHHHHHCCCEEEECCCCCC
Confidence 35689999999999999999999999999999999887543
No 134
>1qgu_B Protein (nitrogenase molybdenum iron protein); biological nitrogen fixation, nitrogen metabolism, molybdoenzymes, electron transfer; HET: HCA CFM CLF; 1.60A {Klebsiella pneumoniae} SCOP: c.92.2.3 PDB: 1h1l_B* 1qh1_B* 1qh8_B*
Probab=44.27 E-value=1.2e+02 Score=30.69 Aligned_cols=34 Identities=12% Similarity=0.361 Sum_probs=26.6
Q ss_pred HHHHHHhhCCCCEEEecCCCccHHHHHHHc-------CCCeEEE
Q 010093 138 PLEQLLQEHKPDCLVADTFFPWATDAAAKF-------GIPRLVF 174 (518)
Q Consensus 138 ~l~~ll~~~~pDlVI~D~~~~~~~~iA~~l-------giP~v~~ 174 (518)
++.+++++.+||++|.+. .+..+|+++ |||++.+
T Consensus 425 ~l~~~i~~~~pDLiig~~---~~~~~a~~~~~~g~~~gip~v~i 465 (519)
T 1qgu_B 425 HFRSLMFTRQPDFMIGNS---YGKFIQRDTLAKGKAFEVPLIRL 465 (519)
T ss_dssp HHHHHHHHHCCSEEEECG---GGHHHHHHHHHHCGGGCCCEEEC
T ss_pred HHHHHHhhcCCCEEEECc---chHHHHHHhhcccccCCCCeEEe
Confidence 456667777999999985 356788888 9999875
No 135
>2gk4_A Conserved hypothetical protein; alpha-beta-alpha sandwich, flavoprotein, structural genomics protein structure initiative; 1.83A {Streptococcus pneumoniae}
Probab=43.84 E-value=37 Score=30.31 Aligned_cols=23 Identities=17% Similarity=0.131 Sum_probs=20.2
Q ss_pred HHHHHHHHHHhCCCeEEEEeCCC
Q 010093 51 PIVDMAKLFATRGVKASVITTPA 73 (518)
Q Consensus 51 p~l~LA~~L~~rGH~Vt~~~~~~ 73 (518)
.-..||++|+++|++|++++.+.
T Consensus 31 mG~aiA~~~~~~Ga~V~lv~~~~ 53 (232)
T 2gk4_A 31 LGKIITETLLSAGYEVCLITTKR 53 (232)
T ss_dssp HHHHHHHHHHHTTCEEEEEECTT
T ss_pred HHHHHHHHHHHCCCEEEEEeCCc
Confidence 46789999999999999998864
No 136
>1rw7_A YDR533CP; alpha-beta sandwich, DJ-1/THIJ/PFPI superfamily, unknown function; 1.80A {Saccharomyces cerevisiae} SCOP: c.23.16.2 PDB: 1qvv_A* 1qvz_A 1qvw_A
Probab=43.64 E-value=39 Score=30.27 Aligned_cols=39 Identities=8% Similarity=0.123 Sum_probs=28.4
Q ss_pred CcEEEEEcCCCc-----------cChHHHHHHHHHHHhCCCeEEEEeCCC
Q 010093 35 QLHVFFFPFMAH-----------GHMIPIVDMAKLFATRGVKASVITTPA 73 (518)
Q Consensus 35 ~~kIl~~~~~~~-----------GH~~p~l~LA~~L~~rGH~Vt~~~~~~ 73 (518)
|.||+|+..... -...=+....+.|.++|++|+++++..
T Consensus 3 m~kvLivls~~~~~~~~~~~~~G~~~~E~~~p~~vl~~ag~~v~~~s~~g 52 (243)
T 1rw7_A 3 PKKVLLALTSYNDVFYSDGAKTGVFVVEALHPFNTFRKEGFEVDFVSETG 52 (243)
T ss_dssp CCEEEEECCCCCCBCSTTSCBCCBCHHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred CceEEEEECCCCcccCCCCCCCccCHHHHHHHHHHHHHCCCEEEEECCCC
Confidence 468887775421 134567777888999999999999853
No 137
>2i2x_B MTAC, methyltransferase 1; TIM barrel and helix bundle (MTAB), rossman fold and helix B (MTAC); HET: B13; 2.50A {Methanosarcina barkeri}
Probab=43.55 E-value=34 Score=31.05 Aligned_cols=40 Identities=13% Similarity=0.001 Sum_probs=36.0
Q ss_pred CCcEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCCC
Q 010093 34 PQLHVFFFPFMAHGHMIPIVDMAKLFATRGVKASVITTPA 73 (518)
Q Consensus 34 ~~~kIl~~~~~~~GH~~p~l~LA~~L~~rGH~Vt~~~~~~ 73 (518)
+..+|++.+.++-.|-....-++..|..+|++|.++....
T Consensus 122 ~~~~vlla~~~gd~HdiG~~iva~~L~~~G~~Vi~LG~~v 161 (258)
T 2i2x_B 122 TKGTVVCHVAEGDVHDIGKNIVTALLRANGYNVVDLGRDV 161 (258)
T ss_dssp CSCEEEEEECTTCCCCHHHHHHHHHHHHTTCEEEEEEEEC
T ss_pred CCCeEEEEeCCCCccHHHHHHHHHHHHHCCCEEEECCCCC
Confidence 4678999999999999999999999999999999887643
No 138
>3f6p_A Transcriptional regulatory protein YYCF; unphosphorelated, receiver domain, cytoplasm, DNA-binding, phosphoprotein, transcription regulation; 1.95A {Bacillus subtilis} SCOP: c.23.1.1 PDB: 2zwm_A
Probab=43.20 E-value=40 Score=25.69 Aligned_cols=39 Identities=15% Similarity=0.483 Sum_probs=26.4
Q ss_pred HHHHHhhCCCCEEEecCCCc--cHHHHHHH----cCCCeEEEecc
Q 010093 139 LEQLLQEHKPDCLVADTFFP--WATDAAAK----FGIPRLVFHGT 177 (518)
Q Consensus 139 l~~ll~~~~pDlVI~D~~~~--~~~~iA~~----lgiP~v~~~~~ 177 (518)
..+.++..+||+||.|..++ .+..+.+. .++|.+.++..
T Consensus 38 al~~~~~~~~dlii~D~~~p~~~g~~~~~~lr~~~~~~ii~~t~~ 82 (120)
T 3f6p_A 38 AVEMVEELQPDLILLDIMLPNKDGVEVCREVRKKYDMPIIMLTAK 82 (120)
T ss_dssp HHHHHHTTCCSEEEEETTSTTTHHHHHHHHHHTTCCSCEEEEEES
T ss_pred HHHHHhhCCCCEEEEeCCCCCCCHHHHHHHHHhcCCCCEEEEECC
Confidence 34455667899999998665 35444443 47888877654
No 139
>3m6m_D Sensory/regulatory protein RPFC; RPFF, REC, enoyl-COA hydratase, lyase-transferase COMP; 2.50A {Xanthomonas campestris PV}
Probab=43.08 E-value=31 Score=27.44 Aligned_cols=38 Identities=18% Similarity=0.296 Sum_probs=26.0
Q ss_pred HHHHhhCCCCEEEecCCCc--cHHHHHHHc---------CCCeEEEecc
Q 010093 140 EQLLQEHKPDCLVADTFFP--WATDAAAKF---------GIPRLVFHGT 177 (518)
Q Consensus 140 ~~ll~~~~pDlVI~D~~~~--~~~~iA~~l---------giP~v~~~~~ 177 (518)
.+.++..+||+||.|..++ .+..+.+.+ .+|++.++..
T Consensus 51 l~~~~~~~~dlvl~D~~mp~~~g~~~~~~lr~~~~~~~~~~pii~~s~~ 99 (143)
T 3m6m_D 51 LDAMAEEDYDAVIVDLHMPGMNGLDMLKQLRVMQASGMRYTPVVVLSAD 99 (143)
T ss_dssp HHHHHHSCCSEEEEESCCSSSCHHHHHHHHHHHHHTTCCCCCEEEEESC
T ss_pred HHHHhcCCCCEEEEeCCCCCCCHHHHHHHHHhchhccCCCCeEEEEeCC
Confidence 3345567899999997665 466665544 2788877654
No 140
>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*
Probab=42.34 E-value=17 Score=33.88 Aligned_cols=38 Identities=16% Similarity=0.073 Sum_probs=27.8
Q ss_pred cCCCCCCCcEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCC
Q 010093 28 NMGSEIPQLHVFFFPFMAHGHMIPIVDMAKLFATRGVKASVITTP 72 (518)
Q Consensus 28 ~m~~~~~~~kIl~~~~~~~GH~~p~l~LA~~L~~rGH~Vt~~~~~ 72 (518)
.|.. +|+||.|+=.+..|+ .||..|+++||+|+++...
T Consensus 10 ~~~~--~~~~I~VIG~G~mG~-----~iA~~la~~G~~V~~~d~~ 47 (302)
T 1f0y_A 10 AKKI--IVKHVTVIGGGLMGA-----GIAQVAAATGHTVVLVDQT 47 (302)
T ss_dssp --CC--CCCEEEEECCSHHHH-----HHHHHHHHTTCEEEEECSC
T ss_pred cccc--cCCEEEEECCCHHHH-----HHHHHHHhCCCeEEEEECC
Confidence 3544 567899987766654 6899999999999987653
No 141
>3trh_A Phosphoribosylaminoimidazole carboxylase carboxyltransferase subunit; purines, pyrimidines, nucleosides, nucleotides, lyase; 2.20A {Coxiella burnetii}
Probab=42.16 E-value=1.5e+02 Score=24.75 Aligned_cols=145 Identities=13% Similarity=0.124 Sum_probs=75.0
Q ss_pred CcEEEEecCCcccCCHHHHHHHHHHHHhCCCcEEEEEcC-CCCCCCCCCCCCCChhHHHHHhcCCCcEeecCccHHHhhc
Q 010093 314 YSVVYVCFGSLANFTSAQLMEIATGLEASGRNFIWVVSK-NKNDGGEGGNEDWLPEGFEKRMEGKGLIIRGWAPQVLILD 392 (518)
Q Consensus 314 ~~vIyvslGS~~~~~~~~~~~l~~al~~~~~~~i~~~~~-~~~~~~~~~~~~~lp~~~~~~~~~~nv~~~~~~pq~~lL~ 392 (518)
+|.|-|=.||.+ +-...++....++.++..+-..+-+ .. .|+.+... +-.- .
T Consensus 6 ~~~V~IimgS~S--D~~v~~~a~~~l~~~gi~~ev~V~SaHR-----------~p~~~~~~-----------~~~a---~ 58 (169)
T 3trh_A 6 KIFVAILMGSDS--DLSTMETAFTELKSLGIPFEAHILSAHR-----------TPKETVEF-----------VENA---D 58 (169)
T ss_dssp CCEEEEEESCGG--GHHHHHHHHHHHHHTTCCEEEEECCTTT-----------SHHHHHHH-----------HHHH---H
T ss_pred CCcEEEEECcHH--hHHHHHHHHHHHHHcCCCEEEEEEcccC-----------CHHHHHHH-----------HHHH---H
Confidence 345666677755 5666777888888888876544433 22 55533221 1000 0
Q ss_pred cCCCcccccccCchhHHH---HHHhCCceecCCccc-ccchhH--HHHHHh--hhccee-eccccccccccCccChHHHH
Q 010093 393 HEAVGGFVTHCGWNSTLE---AVAAGVPLVTWPVAA-EQFYNE--KMVNEI--LKIGVG-VGIQKWCRIVGDFVKRETIE 463 (518)
Q Consensus 393 ~~~~~~~ItHgG~~s~~e---al~~GvP~l~~P~~~-DQ~~na--~~v~e~--~G~G~~-l~~~~~~~~~~~~~~~~~l~ 463 (518)
...++.+|.=+|...-.- |-..-+|+|++|... +-.... .-++ + -|+.+. +... +.+.+++.-+.
T Consensus 59 ~~g~~ViIa~AG~aa~LpgvvA~~t~~PVIgVP~~~~~l~G~dsLlS~v-qmp~GvPVatV~I~-----~a~~~nAa~lA 132 (169)
T 3trh_A 59 NRGCAVFIAAAGLAAHLAGTIAAHTLKPVIGVPMAGGSLGGLDALLSTV-QMPGGVPVACTAIG-----KAGAKNAAILA 132 (169)
T ss_dssp HTTEEEEEEEECSSCCHHHHHHHTCSSCEEEEECCCSTTTTHHHHHHHH-CCCTTSCCEECCST-----HHHHHHHHHHH
T ss_pred hCCCcEEEEECChhhhhHHHHHhcCCCCEEEeecCCCCCCCHHHHHHhh-cCCCCCceEEEecC-----CccchHHHHHH
Confidence 012334777666532222 233457999999753 221222 2222 2 344322 2211 00123444444
Q ss_pred HHHHHHhcCChHHHHHHHHHHHHHHHHHHHhc
Q 010093 464 KAVNEIMVGDRAEEMRSRAKALGKMAKRAVEN 495 (518)
Q Consensus 464 ~av~~ll~~~~~~~~~~~a~~l~~~~~~~~~~ 495 (518)
. ++|. -.|+.++++.+..++..++.+.+
T Consensus 133 a---~Il~-~~d~~l~~kl~~~r~~~~~~v~~ 160 (169)
T 3trh_A 133 A---QIIA-LQDKSIAQKLVQQRTAKRETLKK 160 (169)
T ss_dssp H---HHHH-TTCHHHHHHHHHHHHHHHHHHHH
T ss_pred H---HHHc-CCCHHHHHHHHHHHHHHHHHHHH
Confidence 3 4443 11669999999999998865544
No 142
>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}
Probab=42.01 E-value=15 Score=34.25 Aligned_cols=33 Identities=15% Similarity=0.135 Sum_probs=25.5
Q ss_pred CCcEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeC
Q 010093 34 PQLHVFFFPFMAHGHMIPIVDMAKLFATRGVKASVITT 71 (518)
Q Consensus 34 ~~~kIl~~~~~~~GH~~p~l~LA~~L~~rGH~Vt~~~~ 71 (518)
.++||.|+=.+..| ..+|+.|+++||+|+++..
T Consensus 6 ~~~~I~iIG~G~mG-----~~~a~~l~~~G~~V~~~dr 38 (303)
T 3g0o_A 6 TDFHVGIVGLGSMG-----MGAARSCLRAGLSTWGADL 38 (303)
T ss_dssp -CCEEEEECCSHHH-----HHHHHHHHHTTCEEEEECS
T ss_pred CCCeEEEECCCHHH-----HHHHHHHHHCCCeEEEEEC
Confidence 46799999555544 5789999999999998854
No 143
>2q62_A ARSH; alpha/beta, flavoprotein; 1.80A {Sinorhizobium meliloti}
Probab=42.00 E-value=35 Score=30.77 Aligned_cols=44 Identities=7% Similarity=0.013 Sum_probs=27.5
Q ss_pred cCCCCCCCcEEEEEcCCC--ccChHHHHH-HHHHHHhCCCeEEEEeC
Q 010093 28 NMGSEIPQLHVFFFPFMA--HGHMIPIVD-MAKLFATRGVKASVITT 71 (518)
Q Consensus 28 ~m~~~~~~~kIl~~~~~~--~GH~~p~l~-LA~~L~~rGH~Vt~~~~ 71 (518)
.+.+.+.||||+++.... .|...-+.. +++.|.+.|++|.++--
T Consensus 27 ~~~~~~~~mkIliI~GS~r~~s~t~~La~~~~~~l~~~g~eve~idL 73 (247)
T 2q62_A 27 RPAFSTHRPRILILYGSLRTVSYSRLLAEEARRLLEFFGAEVKVFDP 73 (247)
T ss_dssp CCCCCCSCCEEEEEECCCCSSCHHHHHHHHHHHHHHHTTCEEEECCC
T ss_pred hhhccCCCCeEEEEEccCCCCCHHHHHHHHHHHHHhhCCCEEEEEEh
Confidence 333334678998666443 355544444 56677778999887654
No 144
>2qs7_A Uncharacterized protein; putative oxidoreductase of the DSRE/DSRF-like family, struct genomics, joint center for structural genomics; HET: MSE EPE; 2.09A {Sulfolobus solfataricus P2}
Probab=41.95 E-value=35 Score=27.81 Aligned_cols=40 Identities=10% Similarity=0.007 Sum_probs=31.6
Q ss_pred EEE-EEcCCCccChHHHHHHHHHHHhCCCeEEEEeCCCCcc
Q 010093 37 HVF-FFPFMAHGHMIPIVDMAKLFATRGVKASVITTPANAP 76 (518)
Q Consensus 37 kIl-~~~~~~~GH~~p~l~LA~~L~~rGH~Vt~~~~~~~~~ 76 (518)
|++ ++..+..-.+.+.+.+|...+..|++|+++.+.....
T Consensus 9 kl~II~~sg~~d~~~~a~~lA~~Aaa~g~eV~iF~t~~gv~ 49 (144)
T 2qs7_A 9 KLSIIVFSGTIDKLMPVGILTSGAAASGYEVNLFFTFWGLQ 49 (144)
T ss_dssp EEEEEECCCSHHHHHHHHHHHHHHHHTTCEEEEEECHHHHH
T ss_pred CEEEEEEcCCHHHHHHHHHHHHHHHHcCCcEEEEEehHHHH
Confidence 554 5555677888999999999999999999998865443
No 145
>1o97_C Electron transferring flavoprotein beta-subunit; FAD binding; HET: AMP FAD; 1.6A {Methylophilus methylotrophus} SCOP: c.26.2.3 PDB: 1o95_C* 1o96_A* 1o94_C* 3clr_C* 3cls_C* 3clt_C* 3clu_C*
Probab=40.78 E-value=35 Score=31.18 Aligned_cols=41 Identities=15% Similarity=0.215 Sum_probs=31.6
Q ss_pred HHHHHHHhhCCCCEEEecCCCc------cHHHHHHHcCCCeEEEecc
Q 010093 137 EPLEQLLQEHKPDCLVADTFFP------WATDAAAKFGIPRLVFHGT 177 (518)
Q Consensus 137 ~~l~~ll~~~~pDlVI~D~~~~------~~~~iA~~lgiP~v~~~~~ 177 (518)
..+.+++++.+||+|++..-.. .+..+|..+|+|.+...+.
T Consensus 102 ~~La~~i~~~~~dlVl~G~~s~d~~~~~v~p~lA~~L~~~~vt~v~~ 148 (264)
T 1o97_C 102 RILTEVIKKEAPDMVFAGVQSSDQAYASTGISVASYLNWPHAAVVAD 148 (264)
T ss_dssp HHHHHHHHHHCCSEEEEESCCTTTCCCCHHHHHHHHHTCCEEEEEEE
T ss_pred HHHHHHHHhcCCCEEEEcCCccCCchhhHHHHHHHHhCCCcccceEE
Confidence 3455566666899999886442 6899999999999987654
No 146
>2fb6_A Conserved hypothetical protein; structural genomics, PSI, protein STRU initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.46A {Bacteroides thetaiotaomicron}
Probab=40.22 E-value=27 Score=27.42 Aligned_cols=43 Identities=14% Similarity=0.016 Sum_probs=29.6
Q ss_pred cCCCCCCCcEEEEEcCCC-ccCh-HHHHHHHHHHHhCC--CeEEEEeCCC
Q 010093 28 NMGSEIPQLHVFFFPFMA-HGHM-IPIVDMAKLFATRG--VKASVITTPA 73 (518)
Q Consensus 28 ~m~~~~~~~kIl~~~~~~-~GH~-~p~l~LA~~L~~rG--H~Vt~~~~~~ 73 (518)
+|.+ .+|++|+-+-. .-.. +..+.+|...+++| |+|.++....
T Consensus 3 ~~~~---~~K~~ivi~s~d~~~~~~~al~~A~~a~~~G~~~eV~i~~~G~ 49 (117)
T 2fb6_A 3 AMSA---NDKLTILWTTDNKDTVFNMLAMYALNSKNRGWWKHINIILWGA 49 (117)
T ss_dssp CSST---TSEEEEEECCCCHHHHHHTHHHHHHHHHHHTSCSEEEEEECSH
T ss_pred cccc---CCeEEEEEEcCChHHHHHHHHHHHHHHHHcCCCCcEEEEEECC
Confidence 3555 37877655443 2222 45788899999999 8999998754
No 147
>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6
Probab=40.08 E-value=20 Score=34.12 Aligned_cols=33 Identities=12% Similarity=0.061 Sum_probs=25.2
Q ss_pred CCcEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeC
Q 010093 34 PQLHVFFFPFMAHGHMIPIVDMAKLFATRGVKASVITT 71 (518)
Q Consensus 34 ~~~kIl~~~~~~~GH~~p~l~LA~~L~~rGH~Vt~~~~ 71 (518)
++|||+|+=.+..| ..+|..|.++||+|+++..
T Consensus 3 ~~mki~iiG~G~~G-----~~~a~~L~~~g~~V~~~~r 35 (359)
T 1bg6_A 3 ESKTYAVLGLGNGG-----HAFAAYLALKGQSVLAWDI 35 (359)
T ss_dssp -CCEEEEECCSHHH-----HHHHHHHHHTTCEEEEECS
T ss_pred CcCeEEEECCCHHH-----HHHHHHHHhCCCEEEEEeC
Confidence 46899998665544 4578899999999998854
No 148
>3pdi_B Nitrogenase MOFE cofactor biosynthesis protein NI; nitrogenase cofactor maturation, NIFB, nifdk, NIFH; HET: CZL; 2.40A {Azotobacter vinelandii}
Probab=39.67 E-value=25 Score=35.06 Aligned_cols=34 Identities=21% Similarity=0.385 Sum_probs=27.7
Q ss_pred HHHHHHhhCCCCEEEecCCCccHHHHHHHcCCCeEEE
Q 010093 138 PLEQLLQEHKPDCLVADTFFPWATDAAAKFGIPRLVF 174 (518)
Q Consensus 138 ~l~~ll~~~~pDlVI~D~~~~~~~~iA~~lgiP~v~~ 174 (518)
++++++++.+||++|.+.. ...+|+++|||++.+
T Consensus 366 ~le~~i~~~~pDllig~~~---~~~~a~k~gip~~~~ 399 (458)
T 3pdi_B 366 DLEHAARAGQAQLVIGNSH---ALASARRLGVPLLRA 399 (458)
T ss_dssp HHHHHHHHHTCSEEEECTT---HHHHHHHTTCCEEEC
T ss_pred HHHHHHHhcCCCEEEEChh---HHHHHHHcCCCEEEe
Confidence 4566777889999999843 567999999999875
No 149
>2bln_A Protein YFBG; transferase, formyltransferase, L-ARA4N biosynthesis, methyltransferase; HET: FON U5P; 1.2A {Escherichia coli} SCOP: b.46.1.1 c.65.1.1 PDB: 1yrw_A
Probab=39.52 E-value=2.3e+02 Score=26.26 Aligned_cols=40 Identities=10% Similarity=0.096 Sum_probs=25.8
Q ss_pred HHHHHHhhCCCCEEEecCCCc-cHHHHHHHcCCCeEEEecc
Q 010093 138 PLEQLLQEHKPDCLVADTFFP-WATDAAAKFGIPRLVFHGT 177 (518)
Q Consensus 138 ~l~~ll~~~~pDlVI~D~~~~-~~~~iA~~lgiP~v~~~~~ 177 (518)
.+.+.+++.+||++|+-.+.. ....+-......++-++++
T Consensus 66 ~~~~~l~~~~~Dliv~~~y~~ilp~~il~~~~~g~iNiHpS 106 (305)
T 2bln_A 66 LWVERIAQLSPDVIFSFYYRHLIYDEILQLAPAGAFNLHGS 106 (305)
T ss_dssp HHHHHHHHTCCSEEEEESCCSCCCHHHHTTCTTCEEEEESS
T ss_pred HHHHHHHhcCCCEEEEeccccccCHHHHhcCcCCEEEecCC
Confidence 345667788999999876644 3444444455556766665
No 150
>3ouz_A Biotin carboxylase; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta fold, cytosol, LIG; HET: MSE ADP SRT TLA; 1.90A {Campylobacter jejuni subsp} PDB: 3ouu_A*
Probab=39.26 E-value=92 Score=30.61 Aligned_cols=33 Identities=12% Similarity=0.101 Sum_probs=24.3
Q ss_pred CcEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCC
Q 010093 35 QLHVFFFPFMAHGHMIPIVDMAKLFATRGVKASVITTP 72 (518)
Q Consensus 35 ~~kIl~~~~~~~GH~~p~l~LA~~L~~rGH~Vt~~~~~ 72 (518)
|.||++.-. |. ....+++++++.|++|..+.+.
T Consensus 6 ~~kiLI~g~---g~--~a~~i~~aa~~~G~~~v~v~~~ 38 (446)
T 3ouz_A 6 IKSILIANR---GE--IALRALRTIKEMGKKAICVYSE 38 (446)
T ss_dssp CCEEEECCC---HH--HHHHHHHHHHHTTCEEEEEEEG
T ss_pred cceEEEECC---CH--HHHHHHHHHHHcCCEEEEEEcC
Confidence 457777532 22 5679999999999999888654
No 151
>1p9o_A Phosphopantothenoylcysteine synthetase; ligase; 2.30A {Homo sapiens} SCOP: c.72.3.1
Probab=39.25 E-value=20 Score=33.64 Aligned_cols=38 Identities=11% Similarity=-0.014 Sum_probs=30.5
Q ss_pred E-EEEEcCCCccCh--------------HHHHHHHHHHHhCCCeEEEEeCCCC
Q 010093 37 H-VFFFPFMAHGHM--------------IPIVDMAKLFATRGVKASVITTPAN 74 (518)
Q Consensus 37 k-Il~~~~~~~GH~--------------~p~l~LA~~L~~rGH~Vt~~~~~~~ 74 (518)
| |++.+.|+.=.+ ..-.+||+++.++|++||+++.+..
T Consensus 38 ~~VLITaGgT~EpID~DpVRfItN~SSGkmG~aiAe~~~~~Ga~V~lv~g~~s 90 (313)
T 1p9o_A 38 RVVLVTSGGTKVPLEARPVRFLDNFSSGRRGATSAEAFLAAGYGVLFLYRARS 90 (313)
T ss_dssp CEEEEEESBCEEESSSSCSEEEEECCCCHHHHHHHHHHHHTTCEEEEEEETTS
T ss_pred eEEEEeCCCcccccCCCceeEecCCCCcHHHHHHHHHHHHCCCEEEEEecCCC
Confidence 5 777777776555 2677899999999999999988643
No 152
>3f6r_A Flavodoxin; FMN binding, oxidized, electron transport, flavoprotein, FMN, transport; HET: FMN; 2.00A {Desulfovibrio desulfuricans} SCOP: c.23.5.0 PDB: 3f6s_A* 3f90_A* 3kap_A* 3kaq_A*
Probab=38.96 E-value=38 Score=27.35 Aligned_cols=39 Identities=13% Similarity=0.187 Sum_probs=26.1
Q ss_pred CcEEEEEcCCCccChHH-HHHHHHHHHhCCCeEEEEeCCC
Q 010093 35 QLHVFFFPFMAHGHMIP-IVDMAKLFATRGVKASVITTPA 73 (518)
Q Consensus 35 ~~kIl~~~~~~~GH~~p-~l~LA~~L~~rGH~Vt~~~~~~ 73 (518)
|+||+++-....|+.-- ...|++.|.++|++|.++....
T Consensus 1 M~ki~I~y~S~tGnT~~~A~~ia~~l~~~g~~v~~~~~~~ 40 (148)
T 3f6r_A 1 MSKVLIVFGSSTGNTESIAQKLEELIAAGGHEVTLLNAAD 40 (148)
T ss_dssp -CEEEEEEECSSSHHHHHHHHHHHHHHTTTCEEEEEETTT
T ss_pred CCeEEEEEECCCchHHHHHHHHHHHHHhCCCeEEEEehhh
Confidence 45766555555677654 4446777888899999887654
No 153
>3qvl_A Putative hydantoin racemase; isomerase; HET: 5HY; 1.82A {Klebsiella pneumoniae subsp} PDB: 3qvk_A* 3qvj_A
Probab=38.72 E-value=1.5e+02 Score=26.54 Aligned_cols=31 Identities=19% Similarity=-0.005 Sum_probs=21.6
Q ss_pred hhCCCCEEEecCCCcc-HHHHHHHcCCCeEEE
Q 010093 144 QEHKPDCLVADTFFPW-ATDAAAKFGIPRLVF 174 (518)
Q Consensus 144 ~~~~pDlVI~D~~~~~-~~~iA~~lgiP~v~~ 174 (518)
+..++|+||.-.++.. ...+.+.+++|++-+
T Consensus 66 ~~~g~d~iviaCnt~~~l~~lr~~~~iPvigi 97 (245)
T 3qvl_A 66 REQGVDGHVIASFGDPGLLAARELAQGPVIGI 97 (245)
T ss_dssp HHHTCSEEEEC-CCCTTHHHHHHHCSSCEEEH
T ss_pred HHCCCCEEEEeCCChhHHHHHHHHcCCCEECc
Confidence 3468999998876663 345566779998864
No 154
>3dfu_A Uncharacterized protein from 6-phosphogluconate dehydrogenase-like family; putative rossmann-like dehydrogenase, structural genomics; HET: MSE; 2.07A {Corynebacterium glutamicum}
Probab=38.54 E-value=21 Score=31.86 Aligned_cols=33 Identities=24% Similarity=0.292 Sum_probs=28.1
Q ss_pred CCcEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeC
Q 010093 34 PQLHVFFFPFMAHGHMIPIVDMAKLFATRGVKASVITT 71 (518)
Q Consensus 34 ~~~kIl~~~~~~~GH~~p~l~LA~~L~~rGH~Vt~~~~ 71 (518)
.+|||.|+=.+..|- .||+.|+++||+|+.+..
T Consensus 5 ~~mkI~IIG~G~~G~-----sLA~~L~~~G~~V~~~~~ 37 (232)
T 3dfu_A 5 PRLRVGIFDDGSSTV-----NMAEKLDSVGHYVTVLHA 37 (232)
T ss_dssp CCCEEEEECCSCCCS-----CHHHHHHHTTCEEEECSS
T ss_pred CCcEEEEEeeCHHHH-----HHHHHHHHCCCEEEEecC
Confidence 568999999888774 689999999999988766
No 155
>3ghy_A Ketopantoate reductase protein; oxidoreductase, NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 2.00A {Ralstonia solanacearum}
Probab=38.33 E-value=19 Score=34.10 Aligned_cols=34 Identities=15% Similarity=0.077 Sum_probs=27.3
Q ss_pred CCcEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCC
Q 010093 34 PQLHVFFFPFMAHGHMIPIVDMAKLFATRGVKASVITTP 72 (518)
Q Consensus 34 ~~~kIl~~~~~~~GH~~p~l~LA~~L~~rGH~Vt~~~~~ 72 (518)
++|||+|+=.+..| ..+|..|+++||+|+++...
T Consensus 2 ~~mkI~IiGaG~~G-----~~~a~~L~~~g~~V~~~~r~ 35 (335)
T 3ghy_A 2 SLTRICIVGAGAVG-----GYLGARLALAGEAINVLARG 35 (335)
T ss_dssp CCCCEEEESCCHHH-----HHHHHHHHHTTCCEEEECCH
T ss_pred CCCEEEEECcCHHH-----HHHHHHHHHCCCEEEEEECh
Confidence 45799998666555 56789999999999999864
No 156
>1efv_B Electron transfer flavoprotein; electron transport, glutaric acidemia type II; HET: FAD AMP; 2.10A {Homo sapiens} SCOP: c.26.2.3 PDB: 1t9g_S* 2a1u_B* 2a1t_S*
Probab=38.24 E-value=40 Score=30.55 Aligned_cols=41 Identities=17% Similarity=0.130 Sum_probs=31.0
Q ss_pred HHHHHHHhhCCCCEEEecCCCc------cHHHHHHHcCCCeEEEecc
Q 010093 137 EPLEQLLQEHKPDCLVADTFFP------WATDAAAKFGIPRLVFHGT 177 (518)
Q Consensus 137 ~~l~~ll~~~~pDlVI~D~~~~------~~~~iA~~lgiP~v~~~~~ 177 (518)
..+.+++++.+||+|++..-.. .+..+|..+|+|.+...+.
T Consensus 106 ~~La~~i~~~~~dlVl~G~~s~d~d~~~v~p~lA~~L~~~~vt~v~~ 152 (255)
T 1efv_B 106 RVLAKLAEKEKVDLVLLGKQAIDDDCNQTGQMTAGFLDWPQGTFASQ 152 (255)
T ss_dssp HHHHHHHHHHTCSEEEEESCCTTTCCCCHHHHHHHHHTCCEEEEEEE
T ss_pred HHHHHHHHhcCCCEEEEeCcccCCchhhHHHHHHHHhCCCcccceEE
Confidence 3455556656899999886442 6899999999999986553
No 157
>2nly_A BH1492 protein, divergent polysaccharide deacetylase hypothetical; PFAM04748, structural PSI, protein structure initiative; 2.50A {Bacillus halodurans} SCOP: c.6.2.7
Probab=38.15 E-value=1.8e+02 Score=26.07 Aligned_cols=36 Identities=11% Similarity=0.258 Sum_probs=26.5
Q ss_pred HHHHHHHHhhCCCCEEEecCCCc---cHHHHHHHcCCCeEE
Q 010093 136 QEPLEQLLQEHKPDCLVADTFFP---WATDAAAKFGIPRLV 173 (518)
Q Consensus 136 ~~~l~~ll~~~~pDlVI~D~~~~---~~~~iA~~lgiP~v~ 173 (518)
.+.+.+.+++. .+++.|..+. .+..+|..+|+|++.
T Consensus 117 m~~vm~~l~~~--gL~fvDS~Ts~~S~a~~~A~~~gvp~~~ 155 (245)
T 2nly_A 117 MRAILEVVKEK--NAFIIDSGTSPHSLIPQLAEELEVPYAT 155 (245)
T ss_dssp HHHHHHHHHHT--TCEEEECCCCSSCSHHHHHHHTTCCEEE
T ss_pred HHHHHHHHHHC--CCEEEcCCCCcccHHHHHHHHcCCCeEE
Confidence 33444555544 5999998753 689999999999987
No 158
>3rg8_A Phosphoribosylaminoimidazole carboxylase, PURE PR; purine biosynthesis, lyase; 1.74A {Treponema denticola} SCOP: c.23.8.0 PDB: 3rgg_A*
Probab=37.84 E-value=1.7e+02 Score=24.16 Aligned_cols=138 Identities=12% Similarity=0.092 Sum_probs=72.8
Q ss_pred EEEEecCCcccCCHHHHHHHHHHHHhCCCcEEEEEcC-CCCCCCCCCCCCCChhHHHHHhcCCCcEeecCccHHHhhccC
Q 010093 316 VVYVCFGSLANFTSAQLMEIATGLEASGRNFIWVVSK-NKNDGGEGGNEDWLPEGFEKRMEGKGLIIRGWAPQVLILDHE 394 (518)
Q Consensus 316 vIyvslGS~~~~~~~~~~~l~~al~~~~~~~i~~~~~-~~~~~~~~~~~~~lp~~~~~~~~~~nv~~~~~~pq~~lL~~~ 394 (518)
.|-|-.||.+ +-...++....++.++..+-..+-+ .. .|+.+.... ..-. ...
T Consensus 4 ~V~Iimgs~S--D~~v~~~a~~~l~~~gi~~ev~V~saHR-----------~p~~~~~~~-----------~~a~--~~~ 57 (159)
T 3rg8_A 4 LVIILMGSSS--DMGHAEKIASELKTFGIEYAIRIGSAHK-----------TAEHVVSML-----------KEYE--ALD 57 (159)
T ss_dssp EEEEEESSGG--GHHHHHHHHHHHHHTTCEEEEEECCTTT-----------CHHHHHHHH-----------HHHH--TSC
T ss_pred eEEEEECcHH--HHHHHHHHHHHHHHcCCCEEEEEEcccC-----------CHHHHHHHH-----------HHhh--hcC
Confidence 4556667654 4666777888888888865444433 22 555432211 0000 000
Q ss_pred CCcccccccCch----hHHHHHHhCCceecCCccc---ccchhHHHHHHhh--hcceeeccccccccccCccChHHHHHH
Q 010093 395 AVGGFVTHCGWN----STLEAVAAGVPLVTWPVAA---EQFYNEKMVNEIL--KIGVGVGIQKWCRIVGDFVKRETIEKA 465 (518)
Q Consensus 395 ~~~~~ItHgG~~----s~~eal~~GvP~l~~P~~~---DQ~~na~~v~e~~--G~G~~l~~~~~~~~~~~~~~~~~l~~a 465 (518)
.++.+|.=+|.- ++..+ ..-+|+|.+|... +..+ -.-++ +. |+.+.-- . +.+++.-+..
T Consensus 58 ~~~ViIa~AG~aa~LpgvvA~-~t~~PVIgVP~~~~~l~G~d-LlS~v-qmp~GvpVatv-~-------~~~nAa~lA~- 125 (159)
T 3rg8_A 58 RPKLYITIAGRSNALSGFVDG-FVKGATIACPPPSDSFAGAD-IYSSL-RMPSGISPALV-L-------EPKNAALLAA- 125 (159)
T ss_dssp SCEEEEEECCSSCCHHHHHHH-HSSSCEEECCCCCCGGGGTH-HHHHH-CCCTTCCCEEC-C-------SHHHHHHHHH-
T ss_pred CCcEEEEECCchhhhHHHHHh-ccCCCEEEeeCCCCCCCCcc-HHHHH-hCCCCCceEEe-c-------CchHHHHHHH-
Confidence 234477666643 33333 3668999999532 2333 23232 23 4443321 1 1345544443
Q ss_pred HHHHhcCChHHHHHHHHHHHHHHHHHHHh
Q 010093 466 VNEIMVGDRAEEMRSRAKALGKMAKRAVE 494 (518)
Q Consensus 466 v~~ll~~~~~~~~~~~a~~l~~~~~~~~~ 494 (518)
++|. -.|+.++++.+..++..++.+.
T Consensus 126 --~Il~-~~d~~l~~kl~~~r~~~~~~v~ 151 (159)
T 3rg8_A 126 --RIFS-LYDKEIADSVKSYMESNAQKII 151 (159)
T ss_dssp --HHHT-TTCHHHHHHHHHHHHHHHHHHH
T ss_pred --HHHh-CCCHHHHHHHHHHHHHHHHHHH
Confidence 4443 2266999999998888775543
No 159
>1q57_A DNA primase/helicase; dntpase, DNA replication, transferase; HET: DNA; 3.45A {Enterobacteria phage T7} SCOP: c.37.1.11 e.13.1.2
Probab=37.55 E-value=55 Score=32.95 Aligned_cols=42 Identities=10% Similarity=-0.046 Sum_probs=35.2
Q ss_pred EEEEEcCCCccChHHHHHHHHHHHhC-CCeEEEEeCCCCccch
Q 010093 37 HVFFFPFMAHGHMIPIVDMAKLFATR-GVKASVITTPANAPYV 78 (518)
Q Consensus 37 kIl~~~~~~~GH~~p~l~LA~~L~~r-GH~Vt~~~~~~~~~~~ 78 (518)
=+++.-.|+.|=...++.+|..++.+ |..|.+++.+...+.+
T Consensus 244 l~li~G~pG~GKT~lal~~a~~~a~~~g~~vl~~s~E~s~~~l 286 (503)
T 1q57_A 244 VIMVTSGSGMVMSTFVRQQALQWGTAMGKKVGLAMLEESVEET 286 (503)
T ss_dssp EEEEEESSCHHHHHHHHHHHHHHTTTSCCCEEEEESSSCHHHH
T ss_pred EEEEeecCCCCchHHHHHHHHHHHHhcCCcEEEEeccCCHHHH
Confidence 45677788999999999999999987 9999999998755433
No 160
>3c3m_A Response regulator receiver protein; structural genomics, unknown function, PSI-2, protein struct initiative; HET: MSE; 1.70A {Methanoculleus marisnigri JR1}
Probab=37.48 E-value=55 Score=25.56 Aligned_cols=37 Identities=19% Similarity=0.357 Sum_probs=24.7
Q ss_pred HHHhhCCCCEEEecCCCc--cHHHHHHHc-------CCCeEEEecc
Q 010093 141 QLLQEHKPDCLVADTFFP--WATDAAAKF-------GIPRLVFHGT 177 (518)
Q Consensus 141 ~ll~~~~pDlVI~D~~~~--~~~~iA~~l-------giP~v~~~~~ 177 (518)
+.+...+||+||+|.... .+..+.+.+ .+|++.++..
T Consensus 41 ~~l~~~~~dlvi~D~~l~~~~g~~~~~~l~~~~~~~~~~ii~ls~~ 86 (138)
T 3c3m_A 41 EALNATPPDLVLLDIMMEPMDGWETLERIKTDPATRDIPVLMLTAK 86 (138)
T ss_dssp HHHHHSCCSEEEEESCCSSSCHHHHHHHHHHSTTTTTSCEEEEESS
T ss_pred HHHhccCCCEEEEeCCCCCCCHHHHHHHHHcCcccCCCCEEEEECC
Confidence 345567899999997665 355555443 5788877653
No 161
>3eag_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME diaminopimelate ligase; UDP-N-acetylmuramate:L-alanyl-G glutamyl-MESO-diaminopimelate ligase; 2.55A {Neisseria meningitidis MC58}
Probab=37.46 E-value=32 Score=32.40 Aligned_cols=34 Identities=12% Similarity=0.090 Sum_probs=28.6
Q ss_pred CCcEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeC
Q 010093 34 PQLHVFFFPFMAHGHMIPIVDMAKLFATRGVKASVITT 71 (518)
Q Consensus 34 ~~~kIl~~~~~~~GH~~p~l~LA~~L~~rGH~Vt~~~~ 71 (518)
.|+||.|+=.++.| |-.+|+-|+++||+|+..=.
T Consensus 3 ~~~~i~~iGiGg~G----ms~~A~~L~~~G~~V~~~D~ 36 (326)
T 3eag_A 3 AMKHIHIIGIGGTF----MGGLAAIAKEAGFEVSGCDA 36 (326)
T ss_dssp CCCEEEEESCCSHH----HHHHHHHHHHTTCEEEEEES
T ss_pred CCcEEEEEEECHHH----HHHHHHHHHhCCCEEEEEcC
Confidence 46799999988877 55799999999999998754
No 162
>1gsa_A Glutathione synthetase; ligase; HET: ADP GSH; 2.00A {Escherichia coli} SCOP: c.30.1.3 d.142.1.1 PDB: 1gsh_A 2glt_A 1glv_A
Probab=37.08 E-value=27 Score=32.27 Aligned_cols=38 Identities=8% Similarity=-0.127 Sum_probs=28.3
Q ss_pred CcEEEEEcCCCccC---hHHHHHHHHHHHhCCCeEEEEeCC
Q 010093 35 QLHVFFFPFMAHGH---MIPIVDMAKLFATRGVKASVITTP 72 (518)
Q Consensus 35 ~~kIl~~~~~~~GH---~~p~l~LA~~L~~rGH~Vt~~~~~ 72 (518)
||||+|+..+.... ......++++|.++||+|.++.+.
T Consensus 1 mm~i~il~~~~~~~~~~~~s~~~l~~a~~~~G~~v~~~d~~ 41 (316)
T 1gsa_A 1 MIKLGIVMDPIANINIKKDSSFAMLLEAQRRGYELHYMEMG 41 (316)
T ss_dssp CCEEEEECSCGGGCCTTTCHHHHHHHHHHHTTCEEEEECGG
T ss_pred CceEEEEeCcHHhCCcCCChHHHHHHHHHHCCCEEEEEchh
Confidence 36999988774221 234567999999999999988764
No 163
>1qkk_A DCTD, C4-dicarboxylate transport transcriptional regulatory protein; receiver domain, 2-component signal transduction; 1.7A {Sinorhizobium meliloti} SCOP: c.23.1.1 PDB: 1l5z_A 1l5y_A
Probab=36.56 E-value=1e+02 Score=24.47 Aligned_cols=62 Identities=5% Similarity=-0.059 Sum_probs=38.2
Q ss_pred hCCceecCCcccccchhHHHHHHhhhcceeeccccccccccCccChHHHHHHHHHHhcCChHHHHHHHHHHHHHHH
Q 010093 414 AGVPLVTWPVAAEQFYNEKMVNEILKIGVGVGIQKWCRIVGDFVKRETIEKAVNEIMVGDRAEEMRSRAKALGKMA 489 (518)
Q Consensus 414 ~GvP~l~~P~~~DQ~~na~~v~e~~G~G~~l~~~~~~~~~~~~~~~~~l~~av~~ll~~~~~~~~~~~a~~l~~~~ 489 (518)
..+|+|++--..+. ....... +.|+--.+.+ -++.++|..+|++++. ...++...+++++.+
T Consensus 74 ~~~pii~ls~~~~~-~~~~~~~-~~g~~~~l~k---------P~~~~~L~~~i~~~~~---~~~~~~~~~~~~~~~ 135 (155)
T 1qkk_A 74 PDLPMILVTGHGDI-PMAVQAI-QDGAYDFIAK---------PFAADRLVQSARRAEE---KRRLVMENRSLRRAA 135 (155)
T ss_dssp TTSCEEEEECGGGH-HHHHHHH-HTTCCEEEES---------SCCHHHHHHHHHHHHH---HHHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCCh-HHHHHHH-hcCCCeEEeC---------CCCHHHHHHHHHHHHH---HHHHHHHHHHHHHHH
Confidence 46888877554443 3344442 5676555544 4799999999999997 445544444443333
No 164
>4iiu_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAP; 2.10A {Escherichia coli} PDB: 4iiv_A*
Probab=36.54 E-value=75 Score=28.55 Aligned_cols=34 Identities=15% Similarity=0.088 Sum_probs=25.4
Q ss_pred cEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCC
Q 010093 36 LHVFFFPFMAHGHMIPIVDMAKLFATRGVKASVITTP 72 (518)
Q Consensus 36 ~kIl~~~~~~~GH~~p~l~LA~~L~~rGH~Vt~~~~~ 72 (518)
.|.+++..++.| --..+|+.|+++|++|.++...
T Consensus 26 ~k~vlVTGas~g---IG~~la~~l~~~G~~v~i~~~r 59 (267)
T 4iiu_A 26 SRSVLVTGASKG---IGRAIARQLAADGFNIGVHYHR 59 (267)
T ss_dssp CCEEEETTTTSH---HHHHHHHHHHHTTCEEEEEESS
T ss_pred CCEEEEECCCCh---HHHHHHHHHHHCCCEEEEEeCC
Confidence 466777766533 3578999999999999887654
No 165
>3gt7_A Sensor protein; structural genomics, signal receiver domain, kinase, PSI-2, protein structure initiative; 2.30A {Syntrophus aciditrophicus SB}
Probab=36.52 E-value=54 Score=26.32 Aligned_cols=38 Identities=18% Similarity=0.293 Sum_probs=25.5
Q ss_pred HHHHhhCCCCEEEecCCCc--cHHHHHHH-------cCCCeEEEecc
Q 010093 140 EQLLQEHKPDCLVADTFFP--WATDAAAK-------FGIPRLVFHGT 177 (518)
Q Consensus 140 ~~ll~~~~pDlVI~D~~~~--~~~~iA~~-------lgiP~v~~~~~ 177 (518)
.+.++..+||+||.|.... .+..+.+. -++|++.++..
T Consensus 44 l~~l~~~~~dlii~D~~l~~~~g~~~~~~lr~~~~~~~~pii~~s~~ 90 (154)
T 3gt7_A 44 VRFLSLTRPDLIISDVLMPEMDGYALCRWLKGQPDLRTIPVILLTIL 90 (154)
T ss_dssp HHHHTTCCCSEEEEESCCSSSCHHHHHHHHHHSTTTTTSCEEEEECC
T ss_pred HHHHHhCCCCEEEEeCCCCCCCHHHHHHHHHhCCCcCCCCEEEEECC
Confidence 3445667899999997655 35555443 36788887654
No 166
>2hy5_B Intracellular sulfur oxidation protein DSRF; DSRE, DSRF, sulfur, structural genomics, PSI, protein initiative, berkeley structural genomics center, BSGC, TRAN; 1.72A {Allochromatium vinosum} SCOP: c.114.1.1 PDB: 2hyb_B
Probab=36.44 E-value=38 Score=27.33 Aligned_cols=42 Identities=7% Similarity=-0.011 Sum_probs=29.0
Q ss_pred CcEEE-EEcCCCccChHH--HHHHHHHHHhCCCeEEEEeCCCCcc
Q 010093 35 QLHVF-FFPFMAHGHMIP--IVDMAKLFATRGVKASVITTPANAP 76 (518)
Q Consensus 35 ~~kIl-~~~~~~~GH~~p--~l~LA~~L~~rGH~Vt~~~~~~~~~ 76 (518)
|.|++ ++..+.+|+... .+.+|..+...||+|.++-..+-..
T Consensus 5 Mkk~~ivv~~~P~g~~~~~~al~~a~a~~a~~~~v~Vff~~DGV~ 49 (136)
T 2hy5_B 5 VKKFMYLNRKAPYGTIYAWEALEVVLIGAAFDQDVCVLFLDDGVY 49 (136)
T ss_dssp CCEEEEEECSCTTTSSHHHHHHHHHHHHGGGCCEEEEEECGGGGG
T ss_pred hhEEEEEEeCCCCCcHHHHHHHHHHHHHHhCCCCEEEEEEhHHHH
Confidence 33565 445556666444 5777999999999999887765443
No 167
>1efp_B ETF, protein (electron transfer flavoprotein); electron transport, glutaric acidemia type II; HET: FAD AMP; 2.60A {Paracoccus denitrificans} SCOP: c.26.2.3
Probab=36.05 E-value=40 Score=30.48 Aligned_cols=40 Identities=15% Similarity=0.123 Sum_probs=30.5
Q ss_pred HHHHHHhhCCCCEEEecCCCc------cHHHHHHHcCCCeEEEecc
Q 010093 138 PLEQLLQEHKPDCLVADTFFP------WATDAAAKFGIPRLVFHGT 177 (518)
Q Consensus 138 ~l~~ll~~~~pDlVI~D~~~~------~~~~iA~~lgiP~v~~~~~ 177 (518)
.+.+++++.+||+|++..-.. .+..+|..+|+|.+...+.
T Consensus 104 ~La~~i~~~~~dlVl~G~~s~d~~~~~v~p~lA~~L~~~~vt~v~~ 149 (252)
T 1efp_B 104 ILAAVARAEGTELIIAGKQAIDNDMNATGQMLAAILGWAQATFASK 149 (252)
T ss_dssp HHHHHHHHHTCSEEEEESCCTTTCCCCHHHHHHHHHTCEEEEEEEE
T ss_pred HHHHHHHhcCCCEEEEcCCccCCchhhHHHHHHHHhCCCccccEEE
Confidence 444555556899999886442 6899999999999986553
No 168
>2zki_A 199AA long hypothetical Trp repressor binding protein; alpha/beta structure, transcription; 2.90A {Sulfolobus tokodaii}
Probab=35.89 E-value=34 Score=29.31 Aligned_cols=39 Identities=8% Similarity=0.186 Sum_probs=27.2
Q ss_pred CCcEEEEEcCCCccChHHHHH-HHHHHHhCCCeEEEEeCCC
Q 010093 34 PQLHVFFFPFMAHGHMIPIVD-MAKLFATRGVKASVITTPA 73 (518)
Q Consensus 34 ~~~kIl~~~~~~~GH~~p~l~-LA~~L~~rGH~Vt~~~~~~ 73 (518)
+||||+++... .|+..-+.. +++.|.+.|++|.++.-..
T Consensus 3 ~mmkilii~~S-~g~T~~la~~i~~~l~~~g~~v~~~~l~~ 42 (199)
T 2zki_A 3 CKPNILVLFYG-YGSIVELAKEIGKGAEEAGAEVKIRRVRE 42 (199)
T ss_dssp CCCEEEEEECC-SSHHHHHHHHHHHHHHHHSCEEEEEECCC
T ss_pred CCcEEEEEEeC-ccHHHHHHHHHHHHHHhCCCEEEEEehhH
Confidence 36799877766 787665443 4666667899998886543
No 169
>2zts_A Putative uncharacterized protein PH0186; KAIC like protein, ATP-binding, nucleotide-binding, ATP- binding protein; HET: ADP; 2.07A {Pyrococcus horikoshii}
Probab=35.77 E-value=63 Score=28.40 Aligned_cols=60 Identities=10% Similarity=0.050 Sum_probs=41.7
Q ss_pred cCCCcchHHhhhhccCCCCCCCcEEEEEcCCCccChHHHHHHHHH-HHhCCCeEEEEeCCCCccch
Q 010093 14 TNNSSLSSYLIRKLNMGSEIPQLHVFFFPFMAHGHMIPIVDMAKL-FATRGVKASVITTPANAPYV 78 (518)
Q Consensus 14 ~~~~~~~~~~~~~~~m~~~~~~~kIl~~~~~~~GH~~p~l~LA~~-L~~rGH~Vt~~~~~~~~~~~ 78 (518)
|-...|-..|-+=+.-.. -+++.--|+.|-...++.+|.. +.+.|..|.+++.+...+.+
T Consensus 14 TGi~~LD~~l~GGl~~G~-----l~~i~G~pG~GKT~l~l~~~~~~~~~~~~~v~~~s~E~~~~~~ 74 (251)
T 2zts_A 14 SGIPGFDELIEGGFPEGT-----TVLLTGGTGTGKTTFAAQFIYKGAEEYGEPGVFVTLEERARDL 74 (251)
T ss_dssp CSCTTTGGGTTTSEETTC-----EEEEECCTTSSHHHHHHHHHHHHHHHHCCCEEEEESSSCHHHH
T ss_pred CCcHHHHHhhcCCCCCCe-----EEEEEeCCCCCHHHHHHHHHHHHHHhcCCCceeecccCCHHHH
Confidence 344556655554343332 5678888899999999998866 45668899999988765544
No 170
>3czc_A RMPB; alpha/beta sandwich, phosphotransferase system, transferase, transport; 2.02A {Streptococcus mutans}
Probab=35.65 E-value=38 Score=26.05 Aligned_cols=38 Identities=13% Similarity=0.081 Sum_probs=30.5
Q ss_pred CCcEEEEEcCCCccChHHHH-HHHHHHHhCCCe-EEEEeC
Q 010093 34 PQLHVFFFPFMAHGHMIPIV-DMAKLFATRGVK-ASVITT 71 (518)
Q Consensus 34 ~~~kIl~~~~~~~GH~~p~l-~LA~~L~~rGH~-Vt~~~~ 71 (518)
+|+||+++|..+.|.-.-+. .|-+.+.++|.+ +.+-..
T Consensus 17 ~~~kIlvvC~sG~gTS~m~~~kl~~~~~~~gi~~~~i~~~ 56 (110)
T 3czc_A 17 SMVKVLTACGNGMGSSMVIKMKVENALRQLGVSDIESASC 56 (110)
T ss_dssp -CEEEEEECCCCHHHHHHHHHHHHHHHHHTTCCCEEEEEE
T ss_pred CCcEEEEECCCcHHHHHHHHHHHHHHHHHcCCCeEEEEEe
Confidence 56889999999999999888 777888889988 654444
No 171
>3q9l_A Septum site-determining protein MIND; ATPase, bacterial cell division inhibitor, MINC, MINE, cell hydrolase; HET: ATP; 2.34A {Escherichia coli} PDB: 3r9i_A* 3r9j_A*
Probab=35.63 E-value=37 Score=30.32 Aligned_cols=39 Identities=18% Similarity=0.167 Sum_probs=30.9
Q ss_pred CcEEEEE-c-CCCccChHHHHHHHHHHHhCCCeEEEEeCCC
Q 010093 35 QLHVFFF-P-FMAHGHMIPIVDMAKLFATRGVKASVITTPA 73 (518)
Q Consensus 35 ~~kIl~~-~-~~~~GH~~p~l~LA~~L~~rGH~Vt~~~~~~ 73 (518)
|+|++.+ . -++-|-..-...||..|+++|++|.++=...
T Consensus 1 M~~vi~v~s~kgGvGKTt~a~~LA~~la~~g~~VlliD~D~ 41 (260)
T 3q9l_A 1 MARIIVVTSGKGGVGKTTSSAAIATGLAQKGKKTVVIDFAI 41 (260)
T ss_dssp -CEEEEEECSSTTSSHHHHHHHHHHHHHHTTCCEEEEECCC
T ss_pred CCeEEEEECCCCCCcHHHHHHHHHHHHHhCCCcEEEEECCC
Confidence 3565543 3 5588999999999999999999999986654
No 172
>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*
Probab=35.61 E-value=57 Score=27.57 Aligned_cols=33 Identities=15% Similarity=0.185 Sum_probs=24.3
Q ss_pred cEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCC
Q 010093 36 LHVFFFPFMAHGHMIPIVDMAKLFATRGVKASVITTP 72 (518)
Q Consensus 36 ~kIl~~~~~~~GH~~p~l~LA~~L~~rGH~Vt~~~~~ 72 (518)
++|++. ++.|- --..|++.|.++||+|+.+.-.
T Consensus 4 ~~ilVt--GatG~--iG~~l~~~l~~~g~~V~~~~r~ 36 (206)
T 1hdo_A 4 KKIAIF--GATGQ--TGLTTLAQAVQAGYEVTVLVRD 36 (206)
T ss_dssp CEEEEE--STTSH--HHHHHHHHHHHTTCEEEEEESC
T ss_pred CEEEEE--cCCcH--HHHHHHHHHHHCCCeEEEEEeC
Confidence 577665 33343 3578899999999999988764
No 173
>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}
Probab=35.58 E-value=30 Score=32.31 Aligned_cols=33 Identities=21% Similarity=0.237 Sum_probs=26.1
Q ss_pred CCcEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeC
Q 010093 34 PQLHVFFFPFMAHGHMIPIVDMAKLFATRGVKASVITT 71 (518)
Q Consensus 34 ~~~kIl~~~~~~~GH~~p~l~LA~~L~~rGH~Vt~~~~ 71 (518)
+||||.|+=.+..| ..+|+.|+++||+|+++..
T Consensus 20 ~m~~I~iIG~G~mG-----~~~A~~l~~~G~~V~~~dr 52 (310)
T 3doj_A 20 HMMEVGFLGLGIMG-----KAMSMNLLKNGFKVTVWNR 52 (310)
T ss_dssp CSCEEEEECCSHHH-----HHHHHHHHHTTCEEEEECS
T ss_pred cCCEEEEECccHHH-----HHHHHHHHHCCCeEEEEeC
Confidence 56899998555444 6789999999999998754
No 174
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=35.56 E-value=1.3e+02 Score=26.44 Aligned_cols=150 Identities=12% Similarity=0.026 Sum_probs=77.0
Q ss_pred hhhcCCCCcEEEEecCCcccCCHHHHHHHHHHHHhCCCcEEEEEcCCCCCCCCCCCCCCChhHHHHHhcCCCcEeecCcc
Q 010093 307 WLNSKQPYSVVYVCFGSLANFTSAQLMEIATGLEASGRNFIWVVSKNKNDGGEGGNEDWLPEGFEKRMEGKGLIIRGWAP 386 (518)
Q Consensus 307 ~l~~~~~~~vIyvslGS~~~~~~~~~~~l~~al~~~~~~~i~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~nv~~~~~~p 386 (518)
|++-. .+.+++|..|.++ ...+..|...+..+.+.-+. +.+.+.......++.+....-
T Consensus 26 fl~L~-gk~VLVVGgG~va-------~~ka~~Ll~~GA~VtVvap~-------------~~~~l~~l~~~~~i~~i~~~~ 84 (223)
T 3dfz_A 26 MLDLK-GRSVLVVGGGTIA-------TRRIKGFLQEGAAITVVAPT-------------VSAEINEWEAKGQLRVKRKKV 84 (223)
T ss_dssp EECCT-TCCEEEECCSHHH-------HHHHHHHGGGCCCEEEECSS-------------CCHHHHHHHHTTSCEEECSCC
T ss_pred EEEcC-CCEEEEECCCHHH-------HHHHHHHHHCCCEEEEECCC-------------CCHHHHHHHHcCCcEEEECCC
Confidence 34433 4669999888654 44556777778887776432 112233222234455443333
Q ss_pred HHHhhccCCCcccccccCchhHHHHHHh----CCceecCCcccccchhH-----HHHHHhhhcceeeccccccccccCcc
Q 010093 387 QVLILDHEAVGGFVTHCGWNSTLEAVAA----GVPLVTWPVAAEQFYNE-----KMVNEILKIGVGVGIQKWCRIVGDFV 457 (518)
Q Consensus 387 q~~lL~~~~~~~~ItHgG~~s~~eal~~----GvP~l~~P~~~DQ~~na-----~~v~e~~G~G~~l~~~~~~~~~~~~~ 457 (518)
+...|.. +.++|.--|.-.+.+.++. |+|+-+ .|.+..+ ..+ ++-++-+.+... ...-.
T Consensus 85 ~~~dL~~--adLVIaAT~d~~~N~~I~~~ak~gi~VNv----vD~p~~~~f~~Paiv-~rg~l~iaIST~-----G~sP~ 152 (223)
T 3dfz_A 85 GEEDLLN--VFFIVVATNDQAVNKFVKQHIKNDQLVNM----ASSFSDGNIQIPAQF-SRGRLSLAISTD-----GASPL 152 (223)
T ss_dssp CGGGSSS--CSEEEECCCCTHHHHHHHHHSCTTCEEEC---------CCSEECCEEE-EETTEEEEEECT-----TSCHH
T ss_pred CHhHhCC--CCEEEECCCCHHHHHHHHHHHhCCCEEEE----eCCcccCeEEEeeEE-EeCCEEEEEECC-----CCCcH
Confidence 3445644 5558887777666655543 555432 2332222 223 233344444332 00112
Q ss_pred ChHHHHHHHHHHhcCChHHHHHHHHHHHHHHHH
Q 010093 458 KRETIEKAVNEIMVGDRAEEMRSRAKALGKMAK 490 (518)
Q Consensus 458 ~~~~l~~av~~ll~~~~~~~~~~~a~~l~~~~~ 490 (518)
-+..|++.|.++|. ..-..+.+.+.+++++++
T Consensus 153 la~~iR~~ie~~lp-~~~~~~~~~~~~~R~~vk 184 (223)
T 3dfz_A 153 LTKRIKEDLSSNYD-ESYTQYTQFLYECRVLIH 184 (223)
T ss_dssp HHHHHHHHHHHHSC-THHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcc-HHHHHHHHHHHHHHHHHH
Confidence 35567777777773 333466666666666666
No 175
>1u0t_A Inorganic polyphosphate/ATP-NAD kinase; alpha-beta, beta sandwich, structural genomics, PSI, protein structure initiative; 2.30A {Mycobacterium tuberculosis} SCOP: e.52.1.1 PDB: 1u0r_A 1y3i_A* 1y3h_A
Probab=35.36 E-value=36 Score=31.81 Aligned_cols=28 Identities=14% Similarity=0.139 Sum_probs=23.9
Q ss_pred CcccccccCchhHHHHHHh----CCceecCCc
Q 010093 396 VGGFVTHCGWNSTLEAVAA----GVPLVTWPV 423 (518)
Q Consensus 396 ~~~~ItHgG~~s~~eal~~----GvP~l~~P~ 423 (518)
++++|.-||-||+.+++.. ++|+++++.
T Consensus 76 ~d~vi~~GGDGT~l~a~~~~~~~~~pvlgi~~ 107 (307)
T 1u0t_A 76 CELVLVLGGDGTFLRAAELARNASIPVLGVNL 107 (307)
T ss_dssp CCCEEEEECHHHHHHHHHHHHHHTCCEEEEEC
T ss_pred CCEEEEEeCCHHHHHHHHHhccCCCCEEEEeC
Confidence 5569999999999999754 899999874
No 176
>3f2v_A General stress protein 14; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; HET: FMN; 2.00A {Treponema denticola}
Probab=35.16 E-value=24 Score=30.46 Aligned_cols=36 Identities=3% Similarity=-0.086 Sum_probs=22.3
Q ss_pred CcEEEE-EcCCCccChHHHHHHHHHHHhCCCeEEEEe
Q 010093 35 QLHVFF-FPFMAHGHMIPIVDMAKLFATRGVKASVIT 70 (518)
Q Consensus 35 ~~kIl~-~~~~~~GH~~p~l~LA~~L~~rGH~Vt~~~ 70 (518)
||||++ ..+|-.+.-.-...+++.+.+.|++|+++-
T Consensus 1 MmkiLiI~gsp~~~~s~l~~~l~~~~~~~g~ev~~~d 37 (192)
T 3f2v_A 1 MPKTLIILAHPNISQSTVHKHWSDAVRQHTDRFTVHE 37 (192)
T ss_dssp -CCEEEEECCTTGGGCSHHHHHHHHHTTCTTTEEEEE
T ss_pred CCEEEEEEeCCCccHHHHHHHHHHHHHhCCCeEEEEE
Confidence 568774 445544332345566777777888887764
No 177
>2h78_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC6014, pseudomonas aeruginosa PA01, PSI-2, structural genomics; HET: PG4; 2.20A {Pseudomonas aeruginosa} PDB: 3cum_A 3obb_A* 3q3c_A*
Probab=35.06 E-value=30 Score=32.01 Aligned_cols=33 Identities=18% Similarity=0.173 Sum_probs=26.3
Q ss_pred CCcEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeC
Q 010093 34 PQLHVFFFPFMAHGHMIPIVDMAKLFATRGVKASVITT 71 (518)
Q Consensus 34 ~~~kIl~~~~~~~GH~~p~l~LA~~L~~rGH~Vt~~~~ 71 (518)
+|+||.|+=.+..| ..+|+.|+++||+|+++..
T Consensus 2 ~m~~I~iiG~G~mG-----~~~a~~l~~~G~~V~~~d~ 34 (302)
T 2h78_A 2 HMKQIAFIGLGHMG-----APMATNLLKAGYLLNVFDL 34 (302)
T ss_dssp -CCEEEEECCSTTH-----HHHHHHHHHTTCEEEEECS
T ss_pred CCCEEEEEeecHHH-----HHHHHHHHhCCCeEEEEcC
Confidence 47899999776666 4789999999999998854
No 178
>3o1l_A Formyltetrahydrofolate deformylase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 2.20A {Pseudomonas syringae PV}
Probab=35.06 E-value=2.4e+02 Score=26.04 Aligned_cols=107 Identities=7% Similarity=0.095 Sum_probs=0.0
Q ss_pred CCCcEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeC--CCCccchhhhhhhhhccCCCeEEEEeeCCCccCCCCCCC
Q 010093 33 IPQLHVFFFPFMAHGHMIPIVDMAKLFATRGVKASVITT--PANAPYVSKSVERANELGIEMDVKTIKFPSVEAGLPEGC 110 (518)
Q Consensus 33 ~~~~kIl~~~~~~~GH~~p~l~LA~~L~~rGH~Vt~~~~--~~~~~~~~~~~~~~~~~g~~i~~~~ip~~~~~~~l~~~~ 110 (518)
.+++||+++..+. ||-.-.+--+..--+-+.+|..+.+ +......++. ++.+..+| ....
T Consensus 103 ~~~~ri~vl~Sg~-g~nl~~ll~~~~~g~l~~~I~~Visn~~~~~~~A~~~---------gIp~~~~~--------~~~~ 164 (302)
T 3o1l_A 103 AQKKRVVLMASRE-SHCLADLLHRWHSDELDCDIACVISNHQDLRSMVEWH---------DIPYYHVP--------VDPK 164 (302)
T ss_dssp TSCCEEEEEECSC-CHHHHHHHHHHHTTCSCSEEEEEEESSSTTHHHHHTT---------TCCEEECC--------CCSS
T ss_pred CCCcEEEEEEeCC-chhHHHHHHHHHCCCCCcEEEEEEECcHHHHHHHHHc---------CCCEEEcC--------CCcC
Q ss_pred CccccccchhhhhhHHHHHHHHHhhHHHHHHHHhhCCCCEEEecCCCc-cHHHHHHHcCCCeEEEecc
Q 010093 111 ENLDAITNEVNKGLIVKFFGATMKLQEPLEQLLQEHKPDCLVADTFFP-WATDAAAKFGIPRLVFHGT 177 (518)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~~pDlVI~D~~~~-~~~~iA~~lgiP~v~~~~~ 177 (518)
.. ....+.+.+++++.++|+||+-.++. ....+-..+.-.++-++++
T Consensus 165 ~r--------------------~~~~~~~~~~l~~~~~DliVlagym~IL~~~~l~~~~~~~INiHpS 212 (302)
T 3o1l_A 165 DK--------------------EPAFAEVSRLVGHHQADVVVLARYMQILPPQLCREYAHQVINIHHS 212 (302)
T ss_dssp CC--------------------HHHHHHHHHHHHHTTCSEEEESSCCSCCCTTHHHHTTTCEEEEESS
T ss_pred CH--------------------HHHHHHHHHHHHHhCCCEEEHhHhhhhcCHHHHhhhhCCeEEeCcc
No 179
>2d1p_B TUSC, hypothetical UPF0116 protein YHEM; tRNA modification, sulfur transfer, structural genomics, translation; 2.15A {Escherichia coli} SCOP: c.114.1.1
Probab=34.95 E-value=51 Score=25.70 Aligned_cols=40 Identities=13% Similarity=0.034 Sum_probs=28.6
Q ss_pred EEE-EEcCCCccCh--HHHHHHHHHHHhCCCeEEEEeCCCCcc
Q 010093 37 HVF-FFPFMAHGHM--IPIVDMAKLFATRGVKASVITTPANAP 76 (518)
Q Consensus 37 kIl-~~~~~~~GH~--~p~l~LA~~L~~rGH~Vt~~~~~~~~~ 76 (518)
|++ ++..+.+|+. .-.+.+|.++...||+|.++-..+-..
T Consensus 3 k~~~vv~~~P~g~~~~~~al~~a~a~~a~~~~v~vff~~DGV~ 45 (119)
T 2d1p_B 3 RIAFVFSTAPHGTAAGREGLDALLATSALTDDLAVFFIADGVF 45 (119)
T ss_dssp CEEEEECSCTTTSTHHHHHHHHHHHHHTTCSCEEEEECGGGGG
T ss_pred EEEEEEcCCCCCcHHHHHHHHHHHHHHhCCCCEEEEEehHHHH
Confidence 454 4445566665 557888999999999999887765443
No 180
>1xp8_A RECA protein, recombinase A; recombination, radioresistance, DNA-repair, ATPase, DNA-BIND protein, DNA binding protein; HET: AGS; 2.50A {Deinococcus radiodurans} SCOP: c.37.1.11 d.48.1.1
Probab=34.88 E-value=1.5e+02 Score=28.41 Aligned_cols=40 Identities=8% Similarity=0.007 Sum_probs=34.0
Q ss_pred EEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCCCCcc
Q 010093 37 HVFFFPFMAHGHMIPIVDMAKLFATRGVKASVITTPANAP 76 (518)
Q Consensus 37 kIl~~~~~~~GH~~p~l~LA~~L~~rGH~Vt~~~~~~~~~ 76 (518)
-++++--++.|-..-.+.+|..+..+|..|.|+..+....
T Consensus 76 li~I~G~pGsGKTtlal~la~~~~~~g~~vlyi~~E~s~~ 115 (366)
T 1xp8_A 76 ITEIYGPESGGKTTLALAIVAQAQKAGGTCAFIDAEHALD 115 (366)
T ss_dssp EEEEEESTTSSHHHHHHHHHHHHHHTTCCEEEEESSCCCC
T ss_pred EEEEEcCCCCChHHHHHHHHHHHHHCCCeEEEEECCCChh
Confidence 4566777799999999999999999999999999986443
No 181
>3nhm_A Response regulator; protein structure initiative II(PSI II), NYSGXRC, structural genomics; 2.19A {Myxococcus xanthus}
Probab=34.81 E-value=71 Score=24.49 Aligned_cols=38 Identities=24% Similarity=0.263 Sum_probs=24.3
Q ss_pred HHHHhhCCCCEEEecCCCc--cHHHHHHH-------cCCCeEEEecc
Q 010093 140 EQLLQEHKPDCLVADTFFP--WATDAAAK-------FGIPRLVFHGT 177 (518)
Q Consensus 140 ~~ll~~~~pDlVI~D~~~~--~~~~iA~~-------lgiP~v~~~~~ 177 (518)
.+.+.+.+||+||.|.... .+..+.+. -++|++.++..
T Consensus 40 ~~~l~~~~~dlvi~d~~l~~~~g~~~~~~l~~~~~~~~~pii~~s~~ 86 (133)
T 3nhm_A 40 LQQALAHPPDVLISDVNMDGMDGYALCGHFRSEPTLKHIPVIFVSGY 86 (133)
T ss_dssp HHHHHHSCCSEEEECSSCSSSCHHHHHHHHHHSTTTTTCCEEEEESC
T ss_pred HHHHhcCCCCEEEEeCCCCCCCHHHHHHHHHhCCccCCCCEEEEeCC
Confidence 3445567899999997654 34444332 26788877653
No 182
>1dbw_A Transcriptional regulatory protein FIXJ; doubly wound five-stranded beta/alpha fold, nitrogen fixatio regulation; HET: 15P; 1.60A {Sinorhizobium meliloti} SCOP: c.23.1.1 PDB: 1dck_A* 1dcm_A 1d5w_A*
Probab=34.80 E-value=64 Score=24.58 Aligned_cols=40 Identities=20% Similarity=0.374 Sum_probs=26.5
Q ss_pred HHHHHhhCCCCEEEecCCCc--cHHHHHHHc-----CCCeEEEecch
Q 010093 139 LEQLLQEHKPDCLVADTFFP--WATDAAAKF-----GIPRLVFHGTS 178 (518)
Q Consensus 139 l~~ll~~~~pDlVI~D~~~~--~~~~iA~~l-----giP~v~~~~~~ 178 (518)
..+.+...+||+||.|...+ .+..+.+.+ ++|++.++...
T Consensus 39 ~~~~~~~~~~dlvi~D~~l~~~~g~~~~~~l~~~~~~~~ii~~s~~~ 85 (126)
T 1dbw_A 39 FLAFAPDVRNGVLVTDLRMPDMSGVELLRNLGDLKINIPSIVITGHG 85 (126)
T ss_dssp HHHHGGGCCSEEEEEECCSTTSCHHHHHHHHHHTTCCCCEEEEECTT
T ss_pred HHHHHhcCCCCEEEEECCCCCCCHHHHHHHHHhcCCCCCEEEEECCC
Confidence 34455667899999997654 355554443 67888876643
No 183
>2r85_A PURP protein PF1517; ATP-grAsp superfamily, unknown function; HET: AMP; 1.70A {Pyrococcus furiosus} SCOP: c.30.1.8 d.142.1.9 PDB: 2r84_A* 2r86_A* 2r87_A*
Probab=34.77 E-value=35 Score=31.93 Aligned_cols=32 Identities=6% Similarity=0.112 Sum_probs=26.7
Q ss_pred cEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCCC
Q 010093 36 LHVFFFPFMAHGHMIPIVDMAKLFATRGVKASVITTPA 73 (518)
Q Consensus 36 ~kIl~~~~~~~GH~~p~l~LA~~L~~rGH~Vt~~~~~~ 73 (518)
|||+++..+ ....++++|.++||+|.++.+..
T Consensus 3 m~Ililg~g------~~~~l~~a~~~~G~~v~~~~~~~ 34 (334)
T 2r85_A 3 VRIATYASH------SALQILKGAKDEGFETIAFGSSK 34 (334)
T ss_dssp SEEEEESST------THHHHHHHHHHTTCCEEEESCGG
T ss_pred eEEEEECCh------hHHHHHHHHHhCCCEEEEEECCC
Confidence 689988776 56789999999999999887753
No 184
>1g3q_A MIND ATPase, cell division inhibitor; alpha-beta-alpha layered, protein-ADP complex, cell cycle, hydrolase; HET: ADP; 2.00A {Pyrococcus furiosus} SCOP: c.37.1.10 PDB: 1g3r_A* 1ion_A*
Probab=34.58 E-value=42 Score=29.46 Aligned_cols=38 Identities=11% Similarity=0.136 Sum_probs=30.7
Q ss_pred cEEE-EEc-CCCccChHHHHHHHHHHHhCCCeEEEEeCCC
Q 010093 36 LHVF-FFP-FMAHGHMIPIVDMAKLFATRGVKASVITTPA 73 (518)
Q Consensus 36 ~kIl-~~~-~~~~GH~~p~l~LA~~L~~rGH~Vt~~~~~~ 73 (518)
+|++ |+. -++-|-..-...||..|+++|++|.++-...
T Consensus 2 ~~~i~v~s~kgGvGKTt~a~~LA~~la~~g~~VlliD~D~ 41 (237)
T 1g3q_A 2 GRIISIVSGKGGTGKTTVTANLSVALGDRGRKVLAVDGDL 41 (237)
T ss_dssp CEEEEEECSSTTSSHHHHHHHHHHHHHHTTCCEEEEECCT
T ss_pred ceEEEEecCCCCCCHHHHHHHHHHHHHhcCCeEEEEeCCC
Confidence 4544 444 4588999999999999999999999997654
No 185
>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}
Probab=34.47 E-value=49 Score=28.72 Aligned_cols=34 Identities=12% Similarity=0.134 Sum_probs=25.2
Q ss_pred CcEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCC
Q 010093 35 QLHVFFFPFMAHGHMIPIVDMAKLFATRGVKASVITTP 72 (518)
Q Consensus 35 ~~kIl~~~~~~~GH~~p~l~LA~~L~~rGH~Vt~~~~~ 72 (518)
|+||++. |+.|. --..|++.|.++||+|+.+.-.
T Consensus 4 m~~ilIt--GatG~--iG~~l~~~L~~~g~~V~~~~r~ 37 (227)
T 3dhn_A 4 VKKIVLI--GASGF--VGSALLNEALNRGFEVTAVVRH 37 (227)
T ss_dssp CCEEEEE--TCCHH--HHHHHHHHHHTTTCEEEEECSC
T ss_pred CCEEEEE--cCCch--HHHHHHHHHHHCCCEEEEEEcC
Confidence 5787765 33343 3468899999999999998764
No 186
>2d1p_A TUSD, hypothetical UPF0163 protein YHEN; tRNA modification, sulfur transfer, structural genomics, translation; 2.15A {Escherichia coli} SCOP: c.114.1.1
Probab=34.39 E-value=67 Score=26.00 Aligned_cols=40 Identities=15% Similarity=0.090 Sum_probs=28.4
Q ss_pred CcEEE-EEcCCCccChHH--HHHHHHHHHhCCCeE-EEEeCCCC
Q 010093 35 QLHVF-FFPFMAHGHMIP--IVDMAKLFATRGVKA-SVITTPAN 74 (518)
Q Consensus 35 ~~kIl-~~~~~~~GH~~p--~l~LA~~L~~rGH~V-t~~~~~~~ 74 (518)
.||++ ++..+.+|+-.. .+.+|.++.+.||+| .++-..+.
T Consensus 12 ~~~~~ivv~~~Pyg~~~a~~Al~~A~aala~g~eV~~VFf~~DG 55 (140)
T 2d1p_A 12 SMRFAIVVTGPAYGTQQASSAFQFAQALIADGHELSSVFFYREG 55 (140)
T ss_dssp CCEEEEEECSCSSSSSHHHHHHHHHHHHHHTTCEEEEEEECGGG
T ss_pred ceEEEEEEcCCCCCcHHHHHHHHHHHHHHHCCCccCEEEEechH
Confidence 36766 455556665554 567799999999999 87766543
No 187
>3ezx_A MMCP 1, monomethylamine corrinoid protein 1; N terminal all helical bundle C terminal rossmann fold, cobalt, metal-binding; HET: HCB; 2.56A {Methanosarcina barkeri}
Probab=34.18 E-value=45 Score=29.29 Aligned_cols=45 Identities=11% Similarity=-0.014 Sum_probs=37.9
Q ss_pred CCcEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCCCCccch
Q 010093 34 PQLHVFFFPFMAHGHMIPIVDMAKLFATRGVKASVITTPANAPYV 78 (518)
Q Consensus 34 ~~~kIl~~~~~~~GH~~p~l~LA~~L~~rGH~Vt~~~~~~~~~~~ 78 (518)
++.||++.+.++-.|-....-++..|..+|++|..+...--.+.+
T Consensus 91 ~~~~vll~~v~gd~HdiG~~iv~~~l~~~G~~Vi~LG~~vp~e~i 135 (215)
T 3ezx_A 91 EAGLAITFVAEGDIHDIGHRLVTTMLGANGFQIVDLGVDVLNENV 135 (215)
T ss_dssp -CCEEEEEECTTCCCCHHHHHHHHHHHHTSCEEEECCSSCCHHHH
T ss_pred CCCeEEEEeCCCChhHHHHHHHHHHHHHCCCeEEEcCCCCCHHHH
Confidence 457999999999999999999999999999999998775433333
No 188
>4b4k_A N5-carboxyaminoimidazole ribonucleotide mutase; isomerase; 2.50A {Bacillus anthracis}
Probab=33.99 E-value=2.1e+02 Score=24.10 Aligned_cols=146 Identities=14% Similarity=0.135 Sum_probs=79.7
Q ss_pred CCcEEEEecCCcccCCHHHHHHHHHHHHhCCCcEEEEEcC-CCCCCCCCCCCCCChhHHHHHhcCCCcEeecCccHHHhh
Q 010093 313 PYSVVYVCFGSLANFTSAQLMEIATGLEASGRNFIWVVSK-NKNDGGEGGNEDWLPEGFEKRMEGKGLIIRGWAPQVLIL 391 (518)
Q Consensus 313 ~~~vIyvslGS~~~~~~~~~~~l~~al~~~~~~~i~~~~~-~~~~~~~~~~~~~lp~~~~~~~~~~nv~~~~~~pq~~lL 391 (518)
-+|.|-|=+||.. +-...++..+.|+.++..+-..+-. .. .|+.+....+ -.
T Consensus 21 mkp~V~IimGS~S--D~~v~~~a~~~L~~~gI~~e~~V~SAHR-----------tp~~l~~~~~--------------~a 73 (181)
T 4b4k_A 21 MKSLVGVIMGSTS--DWETMKYACDILDELNIPYEKKVVSAHR-----------TPDYMFEYAE--------------TA 73 (181)
T ss_dssp -CCSEEEEESSGG--GHHHHHHHHHHHHHTTCCEEEEECCTTT-----------SHHHHHHHHH--------------HT
T ss_pred CCccEEEEECCHh--HHHHHHHHHHHHHHcCCCeeEEEEcccc-----------ChHHHHHHHH--------------HH
Confidence 3567778888876 4667788888999998876544433 33 5554322110 00
Q ss_pred ccCCCcccccccCch----hHHHHHHhCCceecCCcccc---cchhHHHHHHhhhcceeeccccccccccCccC---hHH
Q 010093 392 DHEAVGGFVTHCGWN----STLEAVAAGVPLVTWPVAAE---QFYNEKMVNEILKIGVGVGIQKWCRIVGDFVK---RET 461 (518)
Q Consensus 392 ~~~~~~~~ItHgG~~----s~~eal~~GvP~l~~P~~~D---Q~~na~~v~e~~G~G~~l~~~~~~~~~~~~~~---~~~ 461 (518)
....++.+|.=.|.- ++. |-..-+|++++|.... ..+.-.-++ +.=-|+-+..- ... +..
T Consensus 74 ~~~g~~ViIa~AG~aahLpGvv-Aa~T~~PVIGVPv~s~~l~G~DsLlSiv-QMP~GvpVaTv--------aig~~ga~N 143 (181)
T 4b4k_A 74 RERGLKVIIAGAGGAAHLPGMV-AAKTNLPVIGVPVQSKALNGLDSLLSIV-QMPGGVPVATV--------AIGKAGSTN 143 (181)
T ss_dssp TTTTCCEEEEEECSSCCHHHHH-HTTCCSCEEEEECCCTTTTTHHHHHHHH-TCCTTCCCEEC--------CSSHHHHHH
T ss_pred HhcCceEEEEeccccccchhhH-HhcCCCCEEEEecCCCCccchhhHHHHH-hCCCCCceEEE--------ecCCccHHH
Confidence 011234466655543 333 3345679999998543 333333343 33334433221 111 122
Q ss_pred HHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHhcC
Q 010093 462 IEKAVNEIMVGDRAEEMRSRAKALGKMAKRAVENG 496 (518)
Q Consensus 462 l~~av~~ll~~~~~~~~~~~a~~l~~~~~~~~~~~ 496 (518)
-.-...++|. -.|+.++++.+..++..++.+.+.
T Consensus 144 AallA~qILa-~~d~~l~~kl~~~r~~~~~~v~~~ 177 (181)
T 4b4k_A 144 AGLLAAQILG-SFHDDIHDALELRREAIEKDVREG 177 (181)
T ss_dssp HHHHHHHHHT-TTCHHHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHc-cCCHHHHHHHHHHHHHHHHHHHHh
Confidence 2222335564 236699999999998888776653
No 189
>2q5c_A NTRC family transcriptional regulator; structural genomics, protein structure initiative; HET: SO4 GOL; 1.49A {Clostridium acetobutylicum atcc 824}
Probab=33.83 E-value=42 Score=28.99 Aligned_cols=38 Identities=18% Similarity=0.120 Sum_probs=29.6
Q ss_pred HHHHHhhCCCCEEEecCCCccHHHHHHHcCCCeEEEecchH
Q 010093 139 LEQLLQEHKPDCLVADTFFPWATDAAAKFGIPRLVFHGTSF 179 (518)
Q Consensus 139 l~~ll~~~~pDlVI~D~~~~~~~~iA~~lgiP~v~~~~~~~ 179 (518)
..+-++..++|+||.|. .+..+|+++|+|.+.+.++.-
T Consensus 134 ~i~~l~~~G~~vvVG~~---~~~~~A~~~Gl~~vli~sg~e 171 (196)
T 2q5c_A 134 LISKVKTENIKIVVSGK---TVTDEAIKQGLYGETINSGEE 171 (196)
T ss_dssp HHHHHHHTTCCEEEECH---HHHHHHHHTTCEEEECCCCHH
T ss_pred HHHHHHHCCCeEEECCH---HHHHHHHHcCCcEEEEecCHH
Confidence 33345568999999983 468899999999999888543
No 190
>3a10_A Response regulator; phosphoacceptor, signaling protein; HET: MSE PG4; 1.63A {Thermotoga maritima} PDB: 3a0r_B* 3a0u_A*
Probab=33.34 E-value=90 Score=23.12 Aligned_cols=38 Identities=11% Similarity=0.123 Sum_probs=24.6
Q ss_pred HHHHhhCCCCEEEecCCCc--cHHHHHHHc-----CCCeEEEecc
Q 010093 140 EQLLQEHKPDCLVADTFFP--WATDAAAKF-----GIPRLVFHGT 177 (518)
Q Consensus 140 ~~ll~~~~pDlVI~D~~~~--~~~~iA~~l-----giP~v~~~~~ 177 (518)
.+.+...+||+||.|.... .+..+.+.+ ++|.+.++..
T Consensus 38 ~~~~~~~~~dlvl~D~~l~~~~g~~~~~~l~~~~~~~~ii~~s~~ 82 (116)
T 3a10_A 38 LKKFFSGNYDLVILDIEMPGISGLEVAGEIRKKKKDAKIILLTAY 82 (116)
T ss_dssp HHHHHHSCCSEEEECSCCSSSCHHHHHHHHHHHCTTCCEEEEESC
T ss_pred HHHHhcCCCCEEEEECCCCCCCHHHHHHHHHccCCCCeEEEEECC
Confidence 3445567899999997654 354444433 5788777654
No 191
>2qyt_A 2-dehydropantoate 2-reductase; APC81190, porphyromonas gingi W83, structural genomics, PSI-2; HET: MSE; 2.15A {Porphyromonas gingivalis}
Probab=33.05 E-value=22 Score=33.20 Aligned_cols=37 Identities=22% Similarity=0.322 Sum_probs=26.1
Q ss_pred cCCCCCCCcEEEEEcCCCccChHHHHHHHHHHHhC-----C-CeEEEEeC
Q 010093 28 NMGSEIPQLHVFFFPFMAHGHMIPIVDMAKLFATR-----G-VKASVITT 71 (518)
Q Consensus 28 ~m~~~~~~~kIl~~~~~~~GH~~p~l~LA~~L~~r-----G-H~Vt~~~~ 71 (518)
+|.. .+|||+|+=.+..| ..+|..|+++ | |+|+++..
T Consensus 3 ~m~~--~~m~I~iiG~G~mG-----~~~a~~L~~~~~~~~g~~~V~~~~r 45 (317)
T 2qyt_A 3 AMNQ--QPIKIAVFGLGGVG-----GYYGAMLALRAAATDGLLEVSWIAR 45 (317)
T ss_dssp ------CCEEEEEECCSHHH-----HHHHHHHHHHHHHTTSSEEEEEECC
T ss_pred CCCC--CCCEEEEECcCHHH-----HHHHHHHHhCccccCCCCCEEEEEc
Confidence 3554 56899998766666 3668888888 9 99999865
No 192
>3q0i_A Methionyl-tRNA formyltransferase; structural genomics, center for structural genomics of infec diseases, csgid; 1.89A {Vibrio cholerae}
Probab=32.96 E-value=61 Score=30.43 Aligned_cols=35 Identities=9% Similarity=-0.008 Sum_probs=25.5
Q ss_pred CCcEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCCC
Q 010093 34 PQLHVFFFPFMAHGHMIPIVDMAKLFATRGVKASVITTPA 73 (518)
Q Consensus 34 ~~~kIl~~~~~~~GH~~p~l~LA~~L~~rGH~Vt~~~~~~ 73 (518)
++|||+|+-.+. ......++|.++||+|..+.+..
T Consensus 6 ~~mrivf~Gt~~-----fa~~~L~~L~~~~~~v~~Vvt~p 40 (318)
T 3q0i_A 6 QSLRIVFAGTPD-----FAARHLAALLSSEHEIIAVYTQP 40 (318)
T ss_dssp -CCEEEEECCSH-----HHHHHHHHHHTSSSEEEEEECCC
T ss_pred cCCEEEEEecCH-----HHHHHHHHHHHCCCcEEEEEcCC
Confidence 578999986663 34566788889999998776643
No 193
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=32.62 E-value=48 Score=26.97 Aligned_cols=34 Identities=18% Similarity=0.236 Sum_probs=25.4
Q ss_pred CCcEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCC
Q 010093 34 PQLHVFFFPFMAHGHMIPIVDMAKLFATRGVKASVITTP 72 (518)
Q Consensus 34 ~~~kIl~~~~~~~GH~~p~l~LA~~L~~rGH~Vt~~~~~ 72 (518)
+.++|+++=. |.+ -..+|+.|.++|++|+++...
T Consensus 18 ~~~~v~IiG~---G~i--G~~la~~L~~~g~~V~vid~~ 51 (155)
T 2g1u_A 18 KSKYIVIFGC---GRL--GSLIANLASSSGHSVVVVDKN 51 (155)
T ss_dssp CCCEEEEECC---SHH--HHHHHHHHHHTTCEEEEEESC
T ss_pred CCCcEEEECC---CHH--HHHHHHHHHhCCCeEEEEECC
Confidence 4578888843 433 356899999999999998764
No 194
>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}
Probab=32.61 E-value=29 Score=33.27 Aligned_cols=34 Identities=15% Similarity=0.167 Sum_probs=28.1
Q ss_pred CCcEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCC
Q 010093 34 PQLHVFFFPFMAHGHMIPIVDMAKLFATRGVKASVITTP 72 (518)
Q Consensus 34 ~~~kIl~~~~~~~GH~~p~l~LA~~L~~rGH~Vt~~~~~ 72 (518)
.+|||.|+=.+..| ..+|..|++.||+|++....
T Consensus 28 ~~mkI~VIGaG~mG-----~alA~~La~~G~~V~l~~r~ 61 (356)
T 3k96_A 28 FKHPIAILGAGSWG-----TALALVLARKGQKVRLWSYE 61 (356)
T ss_dssp CCSCEEEECCSHHH-----HHHHHHHHTTTCCEEEECSC
T ss_pred cCCeEEEECccHHH-----HHHHHHHHHCCCeEEEEeCC
Confidence 46899998777665 56899999999999998774
No 195
>3hr8_A Protein RECA; alpha and beta proteins (A/B, A+B), ATP-binding, cytoplasm, damage, DNA recombination, DNA repair, DNA-binding; 1.95A {Thermotoga maritima}
Probab=32.51 E-value=1.9e+02 Score=27.54 Aligned_cols=39 Identities=15% Similarity=0.043 Sum_probs=31.7
Q ss_pred EEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCCCCcc
Q 010093 38 VFFFPFMAHGHMIPIVDMAKLFATRGVKASVITTPANAP 76 (518)
Q Consensus 38 Il~~~~~~~GH~~p~l~LA~~L~~rGH~Vt~~~~~~~~~ 76 (518)
++++-.++.|=..-++.++..+...|..|.|+..+....
T Consensus 64 ~~I~GppGsGKSTLal~la~~~~~~gg~VlyId~E~s~~ 102 (356)
T 3hr8_A 64 VEIFGQESSGKTTLALHAIAEAQKMGGVAAFIDAEHALD 102 (356)
T ss_dssp EEEEESTTSSHHHHHHHHHHHHHHTTCCEEEEESSCCCC
T ss_pred EEEECCCCCCHHHHHHHHHHHHHhcCCeEEEEecccccc
Confidence 445556688889999999999999999999998876443
No 196
>3eod_A Protein HNR; response regulator, phosphoprotein, two-component regulatory system, signaling protein; 1.75A {Escherichia coli K12}
Probab=32.48 E-value=63 Score=24.72 Aligned_cols=39 Identities=26% Similarity=0.330 Sum_probs=23.7
Q ss_pred HHHHhhCCCCEEEecCCCc--cHHHHHHH-----cCCCeEEEecch
Q 010093 140 EQLLQEHKPDCLVADTFFP--WATDAAAK-----FGIPRLVFHGTS 178 (518)
Q Consensus 140 ~~ll~~~~pDlVI~D~~~~--~~~~iA~~-----lgiP~v~~~~~~ 178 (518)
.+.++..+||+||+|.... .+..+.+. -++|++.++...
T Consensus 44 ~~~l~~~~~dlvi~d~~l~~~~g~~~~~~l~~~~~~~~ii~~t~~~ 89 (130)
T 3eod_A 44 LELLGGFTPDLMICDIAMPRMNGLKLLEHIRNRGDQTPVLVISATE 89 (130)
T ss_dssp HHHHTTCCCSEEEECCC-----CHHHHHHHHHTTCCCCEEEEECCC
T ss_pred HHHHhcCCCCEEEEecCCCCCCHHHHHHHHHhcCCCCCEEEEEcCC
Confidence 3445677899999997654 23333333 257888876643
No 197
>3tov_A Glycosyl transferase family 9; structural genomics, PSI-BIOL protein structure initiative, midwest center for structural genomics, MCSG; 2.98A {Veillonella parvula}
Probab=32.44 E-value=2.2e+02 Score=26.75 Aligned_cols=99 Identities=16% Similarity=0.148 Sum_probs=57.2
Q ss_pred EEEEEcCCCcc--C--hHHHHHHHHHHHhCCCeEEEEeCCCCccchhhhhhhhhccCCCeEEEEeeCCCccCCCCCCCCc
Q 010093 37 HVFFFPFMAHG--H--MIPIVDMAKLFATRGVKASVITTPANAPYVSKSVERANELGIEMDVKTIKFPSVEAGLPEGCEN 112 (518)
Q Consensus 37 kIl~~~~~~~G--H--~~p~l~LA~~L~~rGH~Vt~~~~~~~~~~~~~~~~~~~~~g~~i~~~~ip~~~~~~~l~~~~~~ 112 (518)
-|+|.|..+.. . ..-+..+++.|.++|++|.++..+...+..+.... . +......
T Consensus 187 ~i~i~pga~~~~k~wp~~~~~~l~~~l~~~g~~vvl~g~~~e~~~~~~i~~-----~----------------~~~~~~~ 245 (349)
T 3tov_A 187 LIGFNIGSAVPEKRWPAERFAHVADYFGRLGYKTVFFGGPMDLEMVQPVVE-----Q----------------METKPIV 245 (349)
T ss_dssp EEEEECCCSSGGGCCCHHHHHHHHHHHHHHTCEEEECCCTTTHHHHHHHHH-----T----------------CSSCCEE
T ss_pred EEEEeCCCCCccCCCCHHHHHHHHHHHHhCCCeEEEEeCcchHHHHHHHHH-----h----------------cccccEE
Confidence 46677765432 2 34589999999999999988776654443332211 0 0000000
Q ss_pred cccccchhhhhhHHHHHHHHHhhHHHHHHHHhhCCCCEEEecCCCccHHHHHHHcCCCeEEEecc
Q 010093 113 LDAITNEVNKGLIVKFFGATMKLQEPLEQLLQEHKPDCLVADTFFPWATDAAAKFGIPRLVFHGT 177 (518)
Q Consensus 113 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~~pDlVI~D~~~~~~~~iA~~lgiP~v~~~~~ 177 (518)
.... ....++..+++ +.|++|+.- .....+|..+|+|+|.++..
T Consensus 246 l~g~-----------------~sl~e~~ali~--~a~~~i~~D--sG~~HlAaa~g~P~v~lfg~ 289 (349)
T 3tov_A 246 ATGK-----------------FQLGPLAAAMN--RCNLLITND--SGPMHVGISQGVPIVALYGP 289 (349)
T ss_dssp CTTC-----------------CCHHHHHHHHH--TCSEEEEES--SHHHHHHHTTTCCEEEECSS
T ss_pred eeCC-----------------CCHHHHHHHHH--hCCEEEECC--CCHHHHHHhcCCCEEEEECC
Confidence 0000 01224555666 679999752 34566788899999998653
No 198
>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}
Probab=32.33 E-value=48 Score=31.06 Aligned_cols=33 Identities=18% Similarity=0.206 Sum_probs=27.1
Q ss_pred CCcEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeC
Q 010093 34 PQLHVFFFPFMAHGHMIPIVDMAKLFATRGVKASVITT 71 (518)
Q Consensus 34 ~~~kIl~~~~~~~GH~~p~l~LA~~L~~rGH~Vt~~~~ 71 (518)
++|||.|+=.+..| ..+|+.|+++||+|+++..
T Consensus 30 ~~~~I~iIG~G~mG-----~~~a~~l~~~G~~V~~~dr 62 (320)
T 4dll_A 30 YARKITFLGTGSMG-----LPMARRLCEAGYALQVWNR 62 (320)
T ss_dssp CCSEEEEECCTTTH-----HHHHHHHHHTTCEEEEECS
T ss_pred CCCEEEEECccHHH-----HHHHHHHHhCCCeEEEEcC
Confidence 56899999776666 6789999999999998754
No 199
>3grc_A Sensor protein, kinase; protein structure initiative II(PSI II), NYSGXRC, 11025B, structural genomics; 2.21A {Polaromonas SP}
Probab=32.29 E-value=70 Score=24.85 Aligned_cols=38 Identities=8% Similarity=0.086 Sum_probs=24.9
Q ss_pred HHHhhCCCCEEEecCCCc--cHHHHHHH-------cCCCeEEEecch
Q 010093 141 QLLQEHKPDCLVADTFFP--WATDAAAK-------FGIPRLVFHGTS 178 (518)
Q Consensus 141 ~ll~~~~pDlVI~D~~~~--~~~~iA~~-------lgiP~v~~~~~~ 178 (518)
+.++..+||+||+|.... .+..+.+. -++|++.++...
T Consensus 44 ~~l~~~~~dlvi~d~~l~~~~g~~~~~~l~~~~~~~~~~ii~~s~~~ 90 (140)
T 3grc_A 44 EQVARRPYAAMTVDLNLPDQDGVSLIRALRRDSRTRDLAIVVVSANA 90 (140)
T ss_dssp HHHHHSCCSEEEECSCCSSSCHHHHHHHHHTSGGGTTCEEEEECTTH
T ss_pred HHHHhCCCCEEEEeCCCCCCCHHHHHHHHHhCcccCCCCEEEEecCC
Confidence 345567899999997655 35554443 257877776653
No 200
>3obb_A Probable 3-hydroxyisobutyrate dehydrogenase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics; HET: EPE; 2.20A {Pseudomonas aeruginosa} PDB: 3q3c_A*
Probab=32.14 E-value=46 Score=30.98 Aligned_cols=31 Identities=19% Similarity=0.209 Sum_probs=26.6
Q ss_pred CcEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEe
Q 010093 35 QLHVFFFPFMAHGHMIPIVDMAKLFATRGVKASVIT 70 (518)
Q Consensus 35 ~~kIl~~~~~~~GH~~p~l~LA~~L~~rGH~Vt~~~ 70 (518)
|.||.|+=.+..| .++|+.|+++||+|++.-
T Consensus 3 M~kIgfIGlG~MG-----~~mA~~L~~~G~~v~v~d 33 (300)
T 3obb_A 3 MKQIAFIGLGHMG-----APMATNLLKAGYLLNVFD 33 (300)
T ss_dssp CCEEEEECCSTTH-----HHHHHHHHHTTCEEEEEC
T ss_pred cCEEEEeeehHHH-----HHHHHHHHhCCCeEEEEc
Confidence 5589999988887 478999999999999874
No 201
>2vqe_B 30S ribosomal protein S2; tRNA-binding, rRNA-binding, metal-binding, zinc-finger, translation; HET: TM2 PAR; 2.5A {Thermus thermophilus} SCOP: c.23.15.1 PDB: 1gix_E* 1hnw_B* 1hnx_B* 1hnz_B* 1hr0_B 1ibk_B* 1ibl_B* 1ibm_B 1j5e_B 1jgo_E* 1jgp_E* 1jgq_E* 1ml5_E* 1n32_B* 1n33_B* 1n34_B 1n36_B 1xmo_B* 1xmq_B* 1xnq_B* ...
Probab=32.07 E-value=2.4e+02 Score=25.35 Aligned_cols=32 Identities=28% Similarity=0.329 Sum_probs=24.6
Q ss_pred CCCCEEE-ecCCCc-cHHHHHHHcCCCeEEEecc
Q 010093 146 HKPDCLV-ADTFFP-WATDAAAKFGIPRLVFHGT 177 (518)
Q Consensus 146 ~~pDlVI-~D~~~~-~~~~iA~~lgiP~v~~~~~ 177 (518)
..||+|| +|+..- -+..=|.++|||+|.+.-+
T Consensus 157 ~~Pdll~V~Dp~~e~~Ai~EA~~l~IPvIaivDT 190 (256)
T 2vqe_B 157 RLPDAIFVVDPTKEAIAVREARKLFIPVIALADT 190 (256)
T ss_dssp SCCSEEEESCTTTTHHHHHHHHHTTCCCEECCCT
T ss_pred cCCCEEEEeCCccchHHHHHHHHcCCCEEEEecC
Confidence 4799988 555444 6788899999999997654
No 202
>1cp2_A CP2, nitrogenase iron protein; oxidoreductase; 1.93A {Clostridium pasteurianum} SCOP: c.37.1.10
Probab=32.01 E-value=44 Score=30.09 Aligned_cols=37 Identities=11% Similarity=0.072 Sum_probs=31.1
Q ss_pred cEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCC
Q 010093 36 LHVFFFPFMAHGHMIPIVDMAKLFATRGVKASVITTP 72 (518)
Q Consensus 36 ~kIl~~~~~~~GH~~p~l~LA~~L~~rGH~Vt~~~~~ 72 (518)
..|.|..-++-|-..-...||..|+++|++|.++=..
T Consensus 2 ~vI~vs~KGGvGKTT~a~nLA~~la~~G~~VlliD~D 38 (269)
T 1cp2_A 2 RQVAIYGKGGIGKSTTTQNLTSGLHAMGKTIMVVGCD 38 (269)
T ss_dssp EEEEEEECTTSSHHHHHHHHHHHHHTTTCCEEEEEEC
T ss_pred cEEEEecCCCCcHHHHHHHHHHHHHHCCCcEEEEcCC
Confidence 3566766778999999999999999999999988544
No 203
>3qxc_A Dethiobiotin synthetase; DTBS, structural genomics, ATP BIND biology, protein structure initiative, midwest center for S genomics, MCSG; HET: ATP; 1.34A {Helicobacter pylori} PDB: 3mle_A* 3qxh_A* 3qxj_A* 3qxs_A* 3qxx_A* 3qy0_A* 2qmo_A
Probab=31.99 E-value=45 Score=29.94 Aligned_cols=36 Identities=22% Similarity=0.264 Sum_probs=29.0
Q ss_pred CcEEEEEc--CCCccChHHHHHHHHHHHhCCCeEEEEe
Q 010093 35 QLHVFFFP--FMAHGHMIPIVDMAKLFATRGVKASVIT 70 (518)
Q Consensus 35 ~~kIl~~~--~~~~GH~~p~l~LA~~L~~rGH~Vt~~~ 70 (518)
|+|.+|+. ...-|=..-.+.|++.|.++|.+|.++=
T Consensus 20 m~k~i~ItgT~t~vGKT~vs~gL~~~L~~~G~~V~~fK 57 (242)
T 3qxc_A 20 QGHMLFISATNTNAGKTTCARLLAQYCNACGVKTILLK 57 (242)
T ss_dssp CCEEEEEEESSTTSSHHHHHHHHHHHHHHTTCCEEEEC
T ss_pred cCcEEEEEeCCCCCcHHHHHHHHHHHHHhCCCceEEEe
Confidence 45655444 3478889999999999999999999884
No 204
>3k9g_A PF-32 protein; ssgcid, SBRI, decode biostructures, UW, NIH, niaid, borellia burgdorferi, plasmid partition protein, iodide; 2.25A {Borrelia burgdorferi} PDB: 3k9h_A
Probab=31.99 E-value=44 Score=30.11 Aligned_cols=46 Identities=13% Similarity=0.145 Sum_probs=31.1
Q ss_pred hccCCCCCCCcEEEEEc--CCCccChHHHHHHHHHHHhCCCeEEEEeCCCC
Q 010093 26 KLNMGSEIPQLHVFFFP--FMAHGHMIPIVDMAKLFATRGVKASVITTPAN 74 (518)
Q Consensus 26 ~~~m~~~~~~~kIl~~~--~~~~GH~~p~l~LA~~L~~rGH~Vt~~~~~~~ 74 (518)
..+|.. +++||+.+. -++-|-..-...||..|+ +|++|.++=....
T Consensus 19 ~~~~~~--~~~~vI~v~s~kGGvGKTT~a~~LA~~la-~g~~VlliD~D~~ 66 (267)
T 3k9g_A 19 PGSMDN--KKPKIITIASIKGGVGKSTSAIILATLLS-KNNKVLLIDMDTQ 66 (267)
T ss_dssp ---------CCEEEEECCSSSSSCHHHHHHHHHHHHT-TTSCEEEEEECTT
T ss_pred cccCCC--CCCeEEEEEeCCCCchHHHHHHHHHHHHH-CCCCEEEEECCCC
Confidence 445665 566766443 558899999999999999 9999999966543
No 205
>1evy_A Glycerol-3-phosphate dehydrogenase; rossmann fold, oxidoreductase; HET: MYS; 1.75A {Leishmania mexicana} SCOP: a.100.1.6 c.2.1.6 PDB: 1evz_A* 1jdj_A* 1m66_A* 1m67_A* 1n1e_A* 1n1g_A*
Probab=31.94 E-value=20 Score=34.40 Aligned_cols=33 Identities=15% Similarity=0.130 Sum_probs=26.1
Q ss_pred CcEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCC
Q 010093 35 QLHVFFFPFMAHGHMIPIVDMAKLFATRGVKASVITTP 72 (518)
Q Consensus 35 ~~kIl~~~~~~~GH~~p~l~LA~~L~~rGH~Vt~~~~~ 72 (518)
|+||.|+=.+..| ..+|..|+++||+|+++...
T Consensus 15 M~kI~iIG~G~mG-----~~la~~L~~~G~~V~~~~r~ 47 (366)
T 1evy_A 15 LNKAVVFGSGAFG-----TALAMVLSKKCREVCVWHMN 47 (366)
T ss_dssp EEEEEEECCSHHH-----HHHHHHHTTTEEEEEEECSC
T ss_pred cCeEEEECCCHHH-----HHHHHHHHhCCCEEEEEECC
Confidence 4599998766555 56899999999999988653
No 206
>3l4e_A Uncharacterized peptidase LMO0363; hypothetical protein LMO0363, csgid, similar to peptidase E, hydrolase, protease, serine protease; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=31.75 E-value=1.3e+02 Score=26.03 Aligned_cols=48 Identities=13% Similarity=-0.027 Sum_probs=34.7
Q ss_pred hHHhHhhhcCCCCcEEEEecCCcccCCHHHHHHHHHHHHhCCCcEEEE
Q 010093 302 LECLKWLNSKQPYSVVYVCFGSLANFTSAQLMEIATGLEASGRNFIWV 349 (518)
Q Consensus 302 ~~l~~~l~~~~~~~vIyvslGS~~~~~~~~~~~l~~al~~~~~~~i~~ 349 (518)
+-+.+|+.....+.++||..+|......+.+..+.++++.+|..+.+.
T Consensus 16 ~~~~~f~~~~~~~~i~~Ip~As~~~~~~~~~~s~~~a~~~lG~~v~~~ 63 (206)
T 3l4e_A 16 PLFTEFESNLQGKTVTFIPTASTVEEVTFYVEAGKKALESLGLLVEEL 63 (206)
T ss_dssp HHHHHHSCCCTTCEEEEECGGGGGCSCCHHHHHHHHHHHHTTCEEEEC
T ss_pred HHHHHHHHHcCCCEEEEECCCCCCCCHHHHHHHHHHHHHHcCCeEEEE
Confidence 446667644444669999988765444567888999999999986654
No 207
>2rjn_A Response regulator receiver:metal-dependent phosphohydrolase, HD subdomain; structural genomics, oceanospirillum SP. MED92; 2.10A {Neptuniibacter caesariensis}
Probab=31.72 E-value=68 Score=25.57 Aligned_cols=40 Identities=18% Similarity=0.194 Sum_probs=26.1
Q ss_pred HHHHhhCCCCEEEecCCCc--cHHHHHHHc-----CCCeEEEecchH
Q 010093 140 EQLLQEHKPDCLVADTFFP--WATDAAAKF-----GIPRLVFHGTSF 179 (518)
Q Consensus 140 ~~ll~~~~pDlVI~D~~~~--~~~~iA~~l-----giP~v~~~~~~~ 179 (518)
.+.+...+||+||+|.... .+..+.+.+ ++|++.++....
T Consensus 44 ~~~l~~~~~dlvi~d~~l~~~~g~~~~~~l~~~~~~~~ii~ls~~~~ 90 (154)
T 2rjn_A 44 LEALKGTSVQLVISDMRMPEMGGEVFLEQVAKSYPDIERVVISGYAD 90 (154)
T ss_dssp HHHHTTSCCSEEEEESSCSSSCHHHHHHHHHHHCTTSEEEEEECGGG
T ss_pred HHHHhcCCCCEEEEecCCCCCCHHHHHHHHHHhCCCCcEEEEecCCC
Confidence 3445567899999997554 344444433 688888876543
No 208
>1tmy_A CHEY protein, TMY; chemotaxis, phosphoryl transfer, signal transduction; 1.90A {Thermotoga maritima} SCOP: c.23.1.1 PDB: 2tmy_A 3tmy_A 4tmy_A 1u0s_Y
Probab=31.68 E-value=69 Score=24.00 Aligned_cols=37 Identities=24% Similarity=0.310 Sum_probs=24.5
Q ss_pred HHhhCCCCEEEecCCCc--cHHHHHHHc-----CCCeEEEecch
Q 010093 142 LLQEHKPDCLVADTFFP--WATDAAAKF-----GIPRLVFHGTS 178 (518)
Q Consensus 142 ll~~~~pDlVI~D~~~~--~~~~iA~~l-----giP~v~~~~~~ 178 (518)
.+...+||+||.|...+ .+..+.+.+ ++|.+.++...
T Consensus 42 ~~~~~~~dlil~D~~l~~~~g~~~~~~l~~~~~~~~ii~~s~~~ 85 (120)
T 1tmy_A 42 KYKELKPDIVTMDITMPEMNGIDAIKEIMKIDPNAKIIVCSAMG 85 (120)
T ss_dssp HHHHHCCSEEEEECSCGGGCHHHHHHHHHHHCTTCCEEEEECTT
T ss_pred HHHhcCCCEEEEeCCCCCCcHHHHHHHHHhhCCCCeEEEEeCCC
Confidence 34456899999997665 355444433 67888876643
No 209
>1zgz_A Torcad operon transcriptional regulatory protein; two-component system, gene regulation, transcription factor, respiratory system; 1.80A {Escherichia coli} SCOP: c.23.1.1
Probab=31.36 E-value=76 Score=23.85 Aligned_cols=39 Identities=15% Similarity=0.290 Sum_probs=25.8
Q ss_pred HHHHHhhCCCCEEEecCCCc--cHHHHHHHc----CCCeEEEecc
Q 010093 139 LEQLLQEHKPDCLVADTFFP--WATDAAAKF----GIPRLVFHGT 177 (518)
Q Consensus 139 l~~ll~~~~pDlVI~D~~~~--~~~~iA~~l----giP~v~~~~~ 177 (518)
..+.++..+||+||.|.... .+..+.+.+ .+|.+.++..
T Consensus 38 ~~~~~~~~~~dlvi~d~~l~~~~g~~~~~~l~~~~~~~ii~~s~~ 82 (122)
T 1zgz_A 38 LREIMQNQSVDLILLDINLPDENGLMLTRALRERSTVGIILVTGR 82 (122)
T ss_dssp HHHHHHHSCCSEEEEESCCSSSCHHHHHHHHHTTCCCEEEEEESS
T ss_pred HHHHHhcCCCCEEEEeCCCCCCChHHHHHHHHhcCCCCEEEEECC
Confidence 34455667899999997655 355555544 5777777654
No 210
>4huj_A Uncharacterized protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, dinucleotide-binding; 1.77A {Sinorhizobium meliloti}
Probab=31.30 E-value=28 Score=30.59 Aligned_cols=32 Identities=16% Similarity=0.130 Sum_probs=24.9
Q ss_pred CcEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeC
Q 010093 35 QLHVFFFPFMAHGHMIPIVDMAKLFATRGVKASVITT 71 (518)
Q Consensus 35 ~~kIl~~~~~~~GH~~p~l~LA~~L~~rGH~Vt~~~~ 71 (518)
||||.|+=.+..| ..+|+.|.+.||+|+++..
T Consensus 23 mmkI~IIG~G~mG-----~~la~~l~~~g~~V~~v~~ 54 (220)
T 4huj_A 23 MTTYAIIGAGAIG-----SALAERFTAAQIPAIIANS 54 (220)
T ss_dssp SCCEEEEECHHHH-----HHHHHHHHHTTCCEEEECT
T ss_pred CCEEEEECCCHHH-----HHHHHHHHhCCCEEEEEEC
Confidence 5799988655444 5789999999999998554
No 211
>1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1dir_A* 1hdr_A*
Probab=31.24 E-value=45 Score=29.55 Aligned_cols=34 Identities=9% Similarity=-0.146 Sum_probs=24.5
Q ss_pred cEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCC
Q 010093 36 LHVFFFPFMAHGHMIPIVDMAKLFATRGVKASVITTP 72 (518)
Q Consensus 36 ~kIl~~~~~~~GH~~p~l~LA~~L~~rGH~Vt~~~~~ 72 (518)
.|.+++...+. .--..+|+.|+++|++|+++...
T Consensus 7 ~k~vlVTGas~---gIG~~ia~~l~~~G~~V~~~~r~ 40 (241)
T 1dhr_A 7 ARRVLVYGGRG---ALGSRCVQAFRARNWWVASIDVV 40 (241)
T ss_dssp CCEEEEETTTS---HHHHHHHHHHHTTTCEEEEEESS
T ss_pred CCEEEEECCCc---HHHHHHHHHHHhCCCEEEEEeCC
Confidence 45556655443 24578999999999999988653
No 212
>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A
Probab=31.23 E-value=59 Score=30.23 Aligned_cols=35 Identities=14% Similarity=0.123 Sum_probs=24.7
Q ss_pred CCcEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCC
Q 010093 34 PQLHVFFFPFMAHGHMIPIVDMAKLFATRGVKASVITTP 72 (518)
Q Consensus 34 ~~~kIl~~~~~~~GH~~p~l~LA~~L~~rGH~Vt~~~~~ 72 (518)
+.++|++. |+.|.+ -..|++.|+++||+|+.+.-.
T Consensus 10 ~~~~vlVT--GatG~i--G~~l~~~L~~~g~~V~~~~r~ 44 (342)
T 1y1p_A 10 EGSLVLVT--GANGFV--ASHVVEQLLEHGYKVRGTARS 44 (342)
T ss_dssp TTCEEEEE--TTTSHH--HHHHHHHHHHTTCEEEEEESS
T ss_pred CCCEEEEE--CCccHH--HHHHHHHHHHCCCEEEEEeCC
Confidence 44666654 333433 467899999999999988753
No 213
>1ydg_A Trp repressor binding protein WRBA; tetramer, structural genomics, PSI, protein structure initiative; 2.00A {Deinococcus radiodurans} SCOP: c.23.5.8 PDB: 1yrh_A*
Probab=31.19 E-value=60 Score=28.00 Aligned_cols=39 Identities=8% Similarity=0.164 Sum_probs=26.8
Q ss_pred CCcEEEEEcCCCccChHHHH-HHHHHHHhCCCeEEEEeCC
Q 010093 34 PQLHVFFFPFMAHGHMIPIV-DMAKLFATRGVKASVITTP 72 (518)
Q Consensus 34 ~~~kIl~~~~~~~GH~~p~l-~LA~~L~~rGH~Vt~~~~~ 72 (518)
+||||+++-....|+..-+. .+++.|.+.|++|.++--.
T Consensus 5 ~mmkilii~~S~~g~T~~la~~i~~~l~~~g~~v~~~~l~ 44 (211)
T 1ydg_A 5 APVKLAIVFYSSTGTGYAMAQEAAEAGRAAGAEVRLLKVR 44 (211)
T ss_dssp CCCEEEEEECCSSSHHHHHHHHHHHHHHHTTCEEEEEECC
T ss_pred CCCeEEEEEECCCChHHHHHHHHHHHHhcCCCEEEEEecc
Confidence 46798866655577765544 4566677789999877654
No 214
>1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A*
Probab=31.08 E-value=29 Score=32.91 Aligned_cols=40 Identities=15% Similarity=0.032 Sum_probs=26.8
Q ss_pred cCCCCCCCcEEEEEcCCCccChHHHHHHHHHHHhCCC-eEEEEeCC
Q 010093 28 NMGSEIPQLHVFFFPFMAHGHMIPIVDMAKLFATRGV-KASVITTP 72 (518)
Q Consensus 28 ~m~~~~~~~kIl~~~~~~~GH~~p~l~LA~~L~~rGH-~Vt~~~~~ 72 (518)
+|++.++++||.++=. |++-- .+|..|+..|| +|+++-..
T Consensus 2 ~~~~~~~~~kI~VIGa---G~vG~--~lA~~la~~g~~~V~L~D~~ 42 (331)
T 1pzg_A 2 APALVQRRKKVAMIGS---GMIGG--TMGYLCALRELADVVLYDVV 42 (331)
T ss_dssp -CCCCSCCCEEEEECC---SHHHH--HHHHHHHHHTCCEEEEECSS
T ss_pred CcCcCCCCCEEEEECC---CHHHH--HHHHHHHhCCCCeEEEEECC
Confidence 3444346689988854 44433 38999999999 98877654
No 215
>1wcv_1 SOJ, segregation protein; ATPase, bacterial, chromosome segregation; 1.6A {Thermus thermophilus} PDB: 2bej_A* 2bek_A*
Probab=30.84 E-value=39 Score=30.35 Aligned_cols=40 Identities=10% Similarity=0.174 Sum_probs=31.1
Q ss_pred CCcEEE-EE-cCCCccChHHHHHHHHHHHhCCCeEEEEeCCC
Q 010093 34 PQLHVF-FF-PFMAHGHMIPIVDMAKLFATRGVKASVITTPA 73 (518)
Q Consensus 34 ~~~kIl-~~-~~~~~GH~~p~l~LA~~L~~rGH~Vt~~~~~~ 73 (518)
+++|++ |+ .-++-|-..-...||..|+++|++|.++=...
T Consensus 4 ~~~~vI~v~s~kGGvGKTt~a~~LA~~la~~g~~VlliD~D~ 45 (257)
T 1wcv_1 4 AKVRRIALANQKGGVGKTTTAINLAAYLARLGKRVLLVDLDP 45 (257)
T ss_dssp -CCCEEEECCSSCCHHHHHHHHHHHHHHHHTTCCEEEEECCT
T ss_pred CCCEEEEEEeCCCCchHHHHHHHHHHHHHHCCCCEEEEECCC
Confidence 345654 44 35588899999999999999999999996654
No 216
>4e7p_A Response regulator; DNA binding, cytosol, transcription regulator; 1.89A {Streptococcus pneumoniae} PDB: 4e7o_A
Probab=30.57 E-value=74 Score=25.23 Aligned_cols=41 Identities=17% Similarity=0.136 Sum_probs=27.3
Q ss_pred HHHHHHHhhCCCCEEEecCCCc--cHHHHHHHc-----CCCeEEEecc
Q 010093 137 EPLEQLLQEHKPDCLVADTFFP--WATDAAAKF-----GIPRLVFHGT 177 (518)
Q Consensus 137 ~~l~~ll~~~~pDlVI~D~~~~--~~~~iA~~l-----giP~v~~~~~ 177 (518)
.+..+.++..+||+||.|.... .+..+.+.+ ++|++.++..
T Consensus 56 ~~al~~l~~~~~dlii~D~~l~~~~g~~~~~~l~~~~~~~~ii~ls~~ 103 (150)
T 4e7p_A 56 QEAIQLLEKESVDIAILDVEMPVKTGLEVLEWIRSEKLETKVVVVTTF 103 (150)
T ss_dssp HHHHHHHTTSCCSEEEECSSCSSSCHHHHHHHHHHTTCSCEEEEEESC
T ss_pred HHHHHHhhccCCCEEEEeCCCCCCcHHHHHHHHHHhCCCCeEEEEeCC
Confidence 3445566778899999997654 355554432 6788877664
No 217
>1u11_A PURE (N5-carboxyaminoimidazole ribonucleotide MUT; acidophIle, protein stability, lyase; HET: CIT; 1.55A {Acetobacter aceti} SCOP: c.23.8.1 PDB: 2fwj_A* 2fw1_A* 2fwb_A 2fwa_A 2fw9_A 2fw7_A 2fw6_A 2fwp_A* 2fwi_A* 2fw8_A
Probab=30.34 E-value=2.5e+02 Score=23.74 Aligned_cols=145 Identities=12% Similarity=0.132 Sum_probs=78.3
Q ss_pred cEEEEecCCcccCCHHHHHHHHHHHHhCCCcEEEEEcC-CCCCCCCCCCCCCChhHHHHHhcCCCcEeecCccHHHhhcc
Q 010093 315 SVVYVCFGSLANFTSAQLMEIATGLEASGRNFIWVVSK-NKNDGGEGGNEDWLPEGFEKRMEGKGLIIRGWAPQVLILDH 393 (518)
Q Consensus 315 ~vIyvslGS~~~~~~~~~~~l~~al~~~~~~~i~~~~~-~~~~~~~~~~~~~lp~~~~~~~~~~nv~~~~~~pq~~lL~~ 393 (518)
+.|-|=.||.. +-....+....++.++..+-..+-+ .. .|+.+....+ + ...
T Consensus 22 ~~V~IimGS~S--D~~v~~~a~~~L~~~Gi~~dv~V~SaHR-----------~p~~l~~~~~-----------~---a~~ 74 (182)
T 1u11_A 22 PVVGIIMGSQS--DWETMRHADALLTELEIPHETLIVSAHR-----------TPDRLADYAR-----------T---AAE 74 (182)
T ss_dssp CSEEEEESSGG--GHHHHHHHHHHHHHTTCCEEEEECCTTT-----------CHHHHHHHHH-----------H---TTT
T ss_pred CEEEEEECcHH--HHHHHHHHHHHHHHcCCCeEEEEEcccC-----------CHHHHHHHHH-----------H---HHh
Confidence 34666677755 5667777888888888875444433 22 5554322110 0 000
Q ss_pred CCCcccccccCc----hhHHHHHHhCCceecCCcccc---cchhHHHHHHh--hhccee-eccccccccccCccChHHHH
Q 010093 394 EAVGGFVTHCGW----NSTLEAVAAGVPLVTWPVAAE---QFYNEKMVNEI--LKIGVG-VGIQKWCRIVGDFVKRETIE 463 (518)
Q Consensus 394 ~~~~~~ItHgG~----~s~~eal~~GvP~l~~P~~~D---Q~~na~~v~e~--~G~G~~-l~~~~~~~~~~~~~~~~~l~ 463 (518)
..++.+|.=+|. .++..+ ..-+|+|++|.... ..+--.-++ + .|+.+. +... +.+.+++.-+.
T Consensus 75 ~g~~ViIa~AG~aa~LpgvvA~-~t~~PVIgVP~~~~~l~G~dsLlSiv-qmP~GvpVatV~I~-----~a~~~nAallA 147 (182)
T 1u11_A 75 RGLNVIIAGAGGAAHLPGMCAA-WTRLPVLGVPVESRALKGMDSLLSIV-QMPGGVPVGTLAIG-----ASGAKNAALLA 147 (182)
T ss_dssp TTCCEEEEEEESSCCHHHHHHH-HCSSCEEEEEECCTTTTTHHHHHHHH-CCCTTSCCEECCSS-----HHHHHHHHHHH
T ss_pred CCCcEEEEecCchhhhHHHHHh-ccCCCEEEeeCCCCCCCcHHHHHHHh-cCCCCCceEEEecC-----CccchHHHHHH
Confidence 113346665554 234433 45789999998542 111112232 4 455542 2221 00134555555
Q ss_pred HHHHHHhcCChHHHHHHHHHHHHHHHHHHHhcCC
Q 010093 464 KAVNEIMVGDRAEEMRSRAKALGKMAKRAVENGG 497 (518)
Q Consensus 464 ~av~~ll~~~~~~~~~~~a~~l~~~~~~~~~~~g 497 (518)
..|.. +. |+.++++.+..++..++.+.+..
T Consensus 148 aqIla-~~---d~~l~~kL~~~r~~~~~~v~~~~ 177 (182)
T 1u11_A 148 ASILA-LY---NPALAARLETWRALQTASVPNSP 177 (182)
T ss_dssp HHHHG-GG---CHHHHHHHHHHHHHHHHHSCSSC
T ss_pred HHHHc-cC---CHHHHHHHHHHHHHHHHHHHHhh
Confidence 44432 23 67999999999999987766543
No 218
>3b2n_A Uncharacterized protein Q99UF4; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics; 2.04A {Staphylococcus aureus}
Probab=30.19 E-value=66 Score=24.86 Aligned_cols=39 Identities=18% Similarity=0.326 Sum_probs=25.2
Q ss_pred HHHHHhhCCCCEEEecCCCc--cHHHHHHHc-----CCCeEEEecc
Q 010093 139 LEQLLQEHKPDCLVADTFFP--WATDAAAKF-----GIPRLVFHGT 177 (518)
Q Consensus 139 l~~ll~~~~pDlVI~D~~~~--~~~~iA~~l-----giP~v~~~~~ 177 (518)
..+.++..+||+||.|...+ .+..+.+.+ ++|++.++..
T Consensus 41 al~~~~~~~~dlvilD~~lp~~~g~~~~~~l~~~~~~~~ii~ls~~ 86 (133)
T 3b2n_A 41 AMKLIEEYNPNVVILDIEMPGMTGLEVLAEIRKKHLNIKVIIVTTF 86 (133)
T ss_dssp HHHHHHHHCCSEEEECSSCSSSCHHHHHHHHHHTTCSCEEEEEESC
T ss_pred HHHHHhhcCCCEEEEecCCCCCCHHHHHHHHHHHCCCCcEEEEecC
Confidence 33445556899999997665 355444443 5788877654
No 219
>3hv2_A Response regulator/HD domain protein; PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.50A {Pseudomonas fluorescens pf-5}
Probab=30.16 E-value=68 Score=25.55 Aligned_cols=39 Identities=21% Similarity=0.336 Sum_probs=25.4
Q ss_pred HHHHhhCCCCEEEecCCCc--cHHHHHHH-----cCCCeEEEecch
Q 010093 140 EQLLQEHKPDCLVADTFFP--WATDAAAK-----FGIPRLVFHGTS 178 (518)
Q Consensus 140 ~~ll~~~~pDlVI~D~~~~--~~~~iA~~-----lgiP~v~~~~~~ 178 (518)
.+.++..+||+||+|.... .+..+.+. -++|+|.++...
T Consensus 51 ~~~l~~~~~dlvi~D~~l~~~~g~~~~~~l~~~~~~~~ii~~s~~~ 96 (153)
T 3hv2_A 51 LQLLASREVDLVISAAHLPQMDGPTLLARIHQQYPSTTRILLTGDP 96 (153)
T ss_dssp HHHHHHSCCSEEEEESCCSSSCHHHHHHHHHHHCTTSEEEEECCCC
T ss_pred HHHHHcCCCCEEEEeCCCCcCcHHHHHHHHHhHCCCCeEEEEECCC
Confidence 3445667899999997655 35444443 267888776543
No 220
>1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2
Probab=29.86 E-value=50 Score=30.40 Aligned_cols=35 Identities=14% Similarity=0.150 Sum_probs=25.2
Q ss_pred CcEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCCC
Q 010093 35 QLHVFFFPFMAHGHMIPIVDMAKLFATRGVKASVITTPA 73 (518)
Q Consensus 35 ~~kIl~~~~~~~GH~~p~l~LA~~L~~rGH~Vt~~~~~~ 73 (518)
|++|++. ++.|.+ -..|+++|.++||+|+.++-..
T Consensus 4 ~~~ilVt--GatG~i--G~~l~~~L~~~g~~V~~~~R~~ 38 (313)
T 1qyd_A 4 KSRVLIV--GGTGYI--GKRIVNASISLGHPTYVLFRPE 38 (313)
T ss_dssp CCCEEEE--STTSTT--HHHHHHHHHHTTCCEEEECCSC
T ss_pred CCEEEEE--cCCcHH--HHHHHHHHHhCCCcEEEEECCC
Confidence 4566655 444554 4678999999999999887653
No 221
>2r6a_A DNAB helicase, replicative helicase; replication, DNAB; 2.90A {Geobacillus stearothermophilus} PDB: 2r6c_A 2r6d_A 2r6e_A 2vyf_A 2vye_A
Probab=29.81 E-value=75 Score=31.46 Aligned_cols=40 Identities=13% Similarity=0.118 Sum_probs=33.9
Q ss_pred EEEEEcCCCccChHHHHHHHHHHHh-CCCeEEEEeCCCCcc
Q 010093 37 HVFFFPFMAHGHMIPIVDMAKLFAT-RGVKASVITTPANAP 76 (518)
Q Consensus 37 kIl~~~~~~~GH~~p~l~LA~~L~~-rGH~Vt~~~~~~~~~ 76 (518)
-+++.-.|+.|=...++.+|..++. .|..|.+++.+....
T Consensus 205 liiI~G~pG~GKTtl~l~ia~~~~~~~g~~Vl~~s~E~s~~ 245 (454)
T 2r6a_A 205 LIIVAARPSVGKTAFALNIAQNVATKTNENVAIFSLEMSAQ 245 (454)
T ss_dssp EEEEECCTTSCHHHHHHHHHHHHHHHSSCCEEEEESSSCHH
T ss_pred EEEEECCCCCCHHHHHHHHHHHHHHhCCCcEEEEECCCCHH
Confidence 5677788899999999999999986 699999999876544
No 222
>1pno_A NAD(P) transhydrogenase subunit beta; nucleotide binding fold, oxidoreductase; HET: NAP; 2.10A {Rhodospirillum rubrum} SCOP: c.31.1.4 PDB: 1pnq_A* 1xlt_C* 2oor_C* 1ptj_C* 2oo5_C*
Probab=29.80 E-value=53 Score=27.39 Aligned_cols=38 Identities=21% Similarity=0.291 Sum_probs=29.7
Q ss_pred cEEEEEcCCC--c-cChHHHHHHHHHHHhCCCeEEEEeCCC
Q 010093 36 LHVFFFPFMA--H-GHMIPIVDMAKLFATRGVKASVITTPA 73 (518)
Q Consensus 36 ~kIl~~~~~~--~-GH~~p~l~LA~~L~~rGH~Vt~~~~~~ 73 (518)
-+|+++|.=+ . ---.+...|++.|.++|.+|.|+.+|-
T Consensus 24 ~~ViIvPGYGmAvAqAQ~~v~el~~~L~~~G~~V~faIHPV 64 (180)
T 1pno_A 24 SKVIIVPGYGMAVAQAQHALREMADVLKKEGVEVSYAIHPV 64 (180)
T ss_dssp SEEEEEECHHHHHHTCHHHHHHHHHHHHHTTCEEEEEECTT
T ss_pred CeEEEECChHHHHHHHHHHHHHHHHHHHHCCCeEEEEeccc
Confidence 3788888432 1 134688999999999999999999974
No 223
>2c5m_A CTP synthase; cytidine 5-prime triphosphate synthetase, CTP synthetase, UTP, glutamine, amidotransferase, ligase, phosphorylation; 2.80A {Homo sapiens} PDB: 2vo1_A 3ihl_A*
Probab=29.78 E-value=35 Score=30.89 Aligned_cols=42 Identities=10% Similarity=0.118 Sum_probs=33.3
Q ss_pred CcEEEEEcCC---CccChHHHHHHHHHHHhCCCeEEEEeCCCCcc
Q 010093 35 QLHVFFFPFM---AHGHMIPIVDMAKLFATRGVKASVITTPANAP 76 (518)
Q Consensus 35 ~~kIl~~~~~---~~GH~~p~l~LA~~L~~rGH~Vt~~~~~~~~~ 76 (518)
+||.+|++.+ +.|-=.-...|+.-|..||++||.+=-+++.+
T Consensus 22 ~mKyIfVTGGVvSglGKGi~aaSlG~LLk~rG~~Vt~~KiDPYlN 66 (294)
T 2c5m_A 22 SMKYILVTGGVISGIGKGIIASSVGTILKSCGLHVTSIKIDPYIN 66 (294)
T ss_dssp CCEEEEEEECSSTTSCHHHHHHHHHHHHHTTTCCEECCEEECBCC
T ss_pred ceEEEEEcCccccccchHHHHHHHHHHHHHCCCeeEEEecCCcee
Confidence 4699999866 55666778999999999999999886655443
No 224
>3icc_A Putative 3-oxoacyl-(acyl carrier protein) reducta; structural genomics, putative 3-oxoacyl-(acyl carrier protei reductase, oxidoreductase; HET: NAP MES; 1.87A {Bacillus anthracis str}
Probab=29.63 E-value=2.8e+02 Score=24.15 Aligned_cols=34 Identities=18% Similarity=0.096 Sum_probs=26.1
Q ss_pred EEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCCC
Q 010093 37 HVFFFPFMAHGHMIPIVDMAKLFATRGVKASVITTPA 73 (518)
Q Consensus 37 kIl~~~~~~~GH~~p~l~LA~~L~~rGH~Vt~~~~~~ 73 (518)
|++++..++.| --..+|+.|+++|++|.++....
T Consensus 8 k~vlITGas~g---IG~~~a~~l~~~G~~v~~~~~~~ 41 (255)
T 3icc_A 8 KVALVTGASRG---IGRAIAKRLANDGALVAIHYGNR 41 (255)
T ss_dssp CEEEETTCSSH---HHHHHHHHHHHTTCEEEEEESSC
T ss_pred CEEEEECCCCh---HHHHHHHHHHHCCCeEEEEeCCc
Confidence 67777777654 46789999999999998875543
No 225
>3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri}
Probab=29.60 E-value=50 Score=30.61 Aligned_cols=35 Identities=9% Similarity=0.049 Sum_probs=25.3
Q ss_pred CcEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCCC
Q 010093 35 QLHVFFFPFMAHGHMIPIVDMAKLFATRGVKASVITTPA 73 (518)
Q Consensus 35 ~~kIl~~~~~~~GH~~p~l~LA~~L~~rGH~Vt~~~~~~ 73 (518)
|++|++. ++.|.+ -..|+++|+++||+|+.++-..
T Consensus 4 ~~~ilVt--GatG~i--G~~l~~~L~~~g~~V~~~~R~~ 38 (321)
T 3c1o_A 4 MEKIIIY--GGTGYI--GKFMVRASLSFSHPTFIYARPL 38 (321)
T ss_dssp CCCEEEE--TTTSTT--HHHHHHHHHHTTCCEEEEECCC
T ss_pred ccEEEEE--cCCchh--HHHHHHHHHhCCCcEEEEECCc
Confidence 4566654 444554 4578999999999999988753
No 226
>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*
Probab=29.53 E-value=57 Score=28.22 Aligned_cols=35 Identities=3% Similarity=-0.052 Sum_probs=23.8
Q ss_pred CcEEEEEcCCCccChHHHHHHHHHHH-hCCCeEEEEeCC
Q 010093 35 QLHVFFFPFMAHGHMIPIVDMAKLFA-TRGVKASVITTP 72 (518)
Q Consensus 35 ~~kIl~~~~~~~GH~~p~l~LA~~L~-~rGH~Vt~~~~~ 72 (518)
|||.+++... .|- --..+++.|+ ++||+|+.+.-.
T Consensus 4 mmk~vlVtGa-sg~--iG~~~~~~l~~~~g~~V~~~~r~ 39 (221)
T 3r6d_A 4 MYXYITILGA-AGQ--IAQXLTATLLTYTDMHITLYGRQ 39 (221)
T ss_dssp SCSEEEEEST-TSH--HHHHHHHHHHHHCCCEEEEEESS
T ss_pred eEEEEEEEeC-CcH--HHHHHHHHHHhcCCceEEEEecC
Confidence 5664444432 232 3578999999 899999988764
No 227
>3rpe_A MDAB, modulator of drug activity B; structural genomics, center for structural genomics of infec diseases, csgid, flavodoxin-like fold; HET: FAD; 1.10A {Yersinia pestis}
Probab=29.40 E-value=77 Score=27.88 Aligned_cols=39 Identities=13% Similarity=0.173 Sum_probs=23.2
Q ss_pred CCCcEEEEEc-CCCc----cChHH-H-HHHHHHHHhCCCeEEEEeC
Q 010093 33 IPQLHVFFFP-FMAH----GHMIP-I-VDMAKLFATRGVKASVITT 71 (518)
Q Consensus 33 ~~~~kIl~~~-~~~~----GH~~p-~-l~LA~~L~~rGH~Vt~~~~ 71 (518)
.+||||+++. +|-. +-++- + ..+++.|.+.||+|.++-.
T Consensus 23 ~~M~kiLiI~gsp~~~~s~~s~n~~L~~~~~~~l~~~g~ev~~~dL 68 (218)
T 3rpe_A 23 NAMSNVLIINAMKEFAHSKGALNLTLTNVAADFLRESGHQVKITTV 68 (218)
T ss_dssp -CCCCEEEEECCCCBTTBCSHHHHHHHHHHHHHHHHTTCCEEEEEG
T ss_pred ccCcceEEEEeCCCcccCCChHHHHHHHHHHHHHhhCCCEEEEEEC
Confidence 4678987554 6643 22333 2 2355666678999987654
No 228
>3b6i_A Flavoprotein WRBA; flavoproteins, NADH:quinone oxidoreductase, FMN; HET: FMN 15P; 1.66A {Escherichia coli} PDB: 2r96_A* 2r97_A 2rg1_A* 3b6j_A* 3b6k_A* 3b6m_A*
Probab=29.39 E-value=59 Score=27.58 Aligned_cols=39 Identities=18% Similarity=0.288 Sum_probs=26.3
Q ss_pred CcEEEEEcCCCccChHHHH-HHHHHHHh-CCCeEEEEeCCC
Q 010093 35 QLHVFFFPFMAHGHMIPIV-DMAKLFAT-RGVKASVITTPA 73 (518)
Q Consensus 35 ~~kIl~~~~~~~GH~~p~l-~LA~~L~~-rGH~Vt~~~~~~ 73 (518)
||||+++-....|+..-+. .+++.|.+ .|++|.++--..
T Consensus 1 Mmkilii~~S~~g~t~~la~~i~~~l~~~~g~~v~~~~l~~ 41 (198)
T 3b6i_A 1 MAKVLVLYYSMYGHIETMARAVAEGASKVDGAEVVVKRVPE 41 (198)
T ss_dssp -CEEEEEECCSSSHHHHHHHHHHHHHHTSTTCEEEEEECCC
T ss_pred CCeEEEEEeCCCcHHHHHHHHHHHHHhhcCCCEEEEEEccc
Confidence 4688766655677766544 45666776 899998876543
No 229
>1d4o_A NADP(H) transhydrogenase; nucleotide-binding fold, protein-NADP(H) complex, inverted binding of NADP(H), oxidoreductase; HET: NAP; 1.21A {Bos taurus} SCOP: c.31.1.4
Probab=29.34 E-value=54 Score=27.43 Aligned_cols=37 Identities=22% Similarity=0.387 Sum_probs=29.3
Q ss_pred EEEEEcCC--Ccc-ChHHHHHHHHHHHhCCCeEEEEeCCC
Q 010093 37 HVFFFPFM--AHG-HMIPIVDMAKLFATRGVKASVITTPA 73 (518)
Q Consensus 37 kIl~~~~~--~~G-H~~p~l~LA~~L~~rGH~Vt~~~~~~ 73 (518)
+|+++|.= +.. --.+...|++.|.++|.+|.|+.+|-
T Consensus 24 ~ViIvPGYGmAvAqAQ~~v~el~~~L~~~G~~V~faIHPV 63 (184)
T 1d4o_A 24 SIIITPGYGLCAAKAQYPIADLVKMLSEQGKKVRFGIHPV 63 (184)
T ss_dssp EEEEEECHHHHHTTTHHHHHHHHHHHHHTTCEEEEEECTT
T ss_pred eEEEECChHHHHHHHHHHHHHHHHHHHHCCCeEEEEeccc
Confidence 78888843 112 34688999999999999999999974
No 230
>2qxy_A Response regulator; regulation of transcription, NYSGXRC, protein structure initiative II (PSI II), structural genomics; 1.95A {Thermotoga maritima}
Probab=29.23 E-value=72 Score=24.88 Aligned_cols=38 Identities=16% Similarity=0.164 Sum_probs=24.5
Q ss_pred HHHHHhhCCCCEEEecCCCc--cHHHHHHHc-----CCCeEEEecc
Q 010093 139 LEQLLQEHKPDCLVADTFFP--WATDAAAKF-----GIPRLVFHGT 177 (518)
Q Consensus 139 l~~ll~~~~pDlVI~D~~~~--~~~~iA~~l-----giP~v~~~~~ 177 (518)
..+.++..+||+||+|. .. .+..+.+.+ ++|++.++..
T Consensus 40 a~~~l~~~~~dlvi~d~-~~~~~g~~~~~~l~~~~~~~pii~ls~~ 84 (142)
T 2qxy_A 40 AFTFLRREKIDLVFVDV-FEGEESLNLIRRIREEFPDTKVAVLSAY 84 (142)
T ss_dssp HHHHHTTSCCSEEEEEC-TTTHHHHHHHHHHHHHCTTCEEEEEESC
T ss_pred HHHHHhccCCCEEEEeC-CCCCcHHHHHHHHHHHCCCCCEEEEECC
Confidence 33445667899999998 54 233333332 5888887664
No 231
>1t1j_A Hypothetical protein; structural genomics, PSI, protein structure initiative, MIDW center for structural genomics, MCSG; 1.70A {Pseudomonas aeruginosa} SCOP: c.23.14.2
Probab=29.17 E-value=64 Score=25.57 Aligned_cols=33 Identities=9% Similarity=0.044 Sum_probs=22.3
Q ss_pred CcEEEEEcCCCccChH--------HHHHHHHHHHhCCCeEE
Q 010093 35 QLHVFFFPFMAHGHMI--------PIVDMAKLFATRGVKAS 67 (518)
Q Consensus 35 ~~kIl~~~~~~~GH~~--------p~l~LA~~L~~rGH~Vt 67 (518)
+||.++++.|-.|... -+.+.|..|.++||-+.
T Consensus 7 ~M~~IYIagPysg~~~n~~~~n~~~~~r~A~~l~~~G~ip~ 47 (125)
T 1t1j_A 7 HMRKIFLACPYSHADAEVVEQRFRACNEVAATIVRAGHVVF 47 (125)
T ss_dssp CCCEEEEECCCCCSSHHHHHHHHHHHHHHHHHHHHTTCEEE
T ss_pred hhhheeEECCCCCCcchHHHHHHHHHHHHHHHHHHCCCeee
Confidence 4566777777666632 34556777889999663
No 232
>3kht_A Response regulator; PSI-II, 11023K, structural genomics, Pro structure initiative, NEW YORK SGX research center for STRU genomics, nysgxrc; 2.10A {Hahella chejuensis} SCOP: c.23.1.0
Probab=29.08 E-value=96 Score=24.19 Aligned_cols=39 Identities=15% Similarity=0.172 Sum_probs=25.5
Q ss_pred HHHHHhhCCCCEEEecCCCc--cHHHHHHH-------cCCCeEEEecc
Q 010093 139 LEQLLQEHKPDCLVADTFFP--WATDAAAK-------FGIPRLVFHGT 177 (518)
Q Consensus 139 l~~ll~~~~pDlVI~D~~~~--~~~~iA~~-------lgiP~v~~~~~ 177 (518)
..+.++..+||+||+|.... .+..+.+. -++|++.++..
T Consensus 43 a~~~l~~~~~dlii~D~~l~~~~g~~~~~~lr~~~~~~~~pii~~s~~ 90 (144)
T 3kht_A 43 ALYQVQQAKYDLIILDIGLPIANGFEVMSAVRKPGANQHTPIVILTDN 90 (144)
T ss_dssp HHHHHTTCCCSEEEECTTCGGGCHHHHHHHHHSSSTTTTCCEEEEETT
T ss_pred HHHHhhcCCCCEEEEeCCCCCCCHHHHHHHHHhcccccCCCEEEEeCC
Confidence 33445667899999997665 34444433 35788887654
No 233
>1xhf_A DYE resistance, aerobic respiration control protein ARCA; two-component system, gene regulation, transcription factor, anoxic redox control; 2.15A {Escherichia coli} SCOP: c.23.1.1 PDB: 1xhe_A
Probab=28.82 E-value=95 Score=23.30 Aligned_cols=38 Identities=18% Similarity=0.253 Sum_probs=24.9
Q ss_pred HHHHhhCCCCEEEecCCCc--cHHHHHHH----cCCCeEEEecc
Q 010093 140 EQLLQEHKPDCLVADTFFP--WATDAAAK----FGIPRLVFHGT 177 (518)
Q Consensus 140 ~~ll~~~~pDlVI~D~~~~--~~~~iA~~----lgiP~v~~~~~ 177 (518)
.+.+...+||+||.|.... .+..+.+. -++|.+.++..
T Consensus 40 ~~~~~~~~~dlvi~D~~l~~~~g~~~~~~l~~~~~~~ii~~s~~ 83 (123)
T 1xhf_A 40 HQILSEYDINLVIMDINLPGKNGLLLARELREQANVALMFLTGR 83 (123)
T ss_dssp HHHHHHSCCSEEEECSSCSSSCHHHHHHHHHHHCCCEEEEEESC
T ss_pred HHHHhcCCCCEEEEcCCCCCCCHHHHHHHHHhCCCCcEEEEECC
Confidence 3445567899999997654 35444444 36788777654
No 234
>1mio_B Nitrogenase molybdenum iron protein (beta chain); HET: HCA CFM CLP; 3.00A {Clostridium pasteurianum} SCOP: c.92.2.3
Probab=28.65 E-value=57 Score=32.45 Aligned_cols=34 Identities=24% Similarity=0.358 Sum_probs=26.8
Q ss_pred HHHHHHhhCCCCEEEecCCCccHHHHHHHcCCCeEEE
Q 010093 138 PLEQLLQEHKPDCLVADTFFPWATDAAAKFGIPRLVF 174 (518)
Q Consensus 138 ~l~~ll~~~~pDlVI~D~~~~~~~~iA~~lgiP~v~~ 174 (518)
++.+++++.+||++|.+. ....+|+++|||++.+
T Consensus 376 ~l~~~i~~~~pDl~ig~~---~~~~~a~k~gip~~~~ 409 (458)
T 1mio_B 376 DVHQWIKNEGVDLLISNT---YGKFIAREENIPFVRF 409 (458)
T ss_dssp HHHHHHHHSCCSEEEESG---GGHHHHHHHTCCEEEC
T ss_pred HHHHHHHhcCCCEEEeCc---chHHHHHHcCCCEEEe
Confidence 456667778999999885 3567889999999875
No 235
>2a9o_A Response regulator; essential protein, YYCF/YYCG homolog, signaling protein; 1.65A {Streptococcus pneumoniae} SCOP: c.23.1.1 PDB: 1nxo_A 1nxs_A 1nxv_A 1nxw_A 1nxx_A 1nxp_A 2a9p_A 2a9q_A 1nxt_A* 2a9r_A*
Probab=28.62 E-value=89 Score=23.25 Aligned_cols=37 Identities=19% Similarity=0.432 Sum_probs=24.3
Q ss_pred HHhhCCCCEEEecCCCc--cHHHHHHH----cCCCeEEEecch
Q 010093 142 LLQEHKPDCLVADTFFP--WATDAAAK----FGIPRLVFHGTS 178 (518)
Q Consensus 142 ll~~~~pDlVI~D~~~~--~~~~iA~~----lgiP~v~~~~~~ 178 (518)
.+...+||+||.|...+ .+..+.+. -.+|.+.++...
T Consensus 40 ~~~~~~~dlvl~D~~l~~~~g~~~~~~l~~~~~~~ii~~s~~~ 82 (120)
T 2a9o_A 40 QFEAEQPDIIILDLMLPEIDGLEVAKTIRKTSSVPILMLSAKD 82 (120)
T ss_dssp HHHHHCCSEEEECSSCSSSCHHHHHHHHHHHCCCCEEEEESCC
T ss_pred HHHhCCCCEEEEeccCCCCCHHHHHHHHHhCCCCCEEEEecCC
Confidence 34456899999997654 34444433 468888876643
No 236
>1hyq_A MIND, cell division inhibitor (MIND-1); MINC, FTSZ, bacterial cell division, cell cycle; 2.60A {Archaeoglobus fulgidus} SCOP: c.37.1.10
Probab=28.46 E-value=49 Score=29.67 Aligned_cols=38 Identities=8% Similarity=0.086 Sum_probs=30.7
Q ss_pred cEE-EEE-cCCCccChHHHHHHHHHHHhCCCeEEEEeCCC
Q 010093 36 LHV-FFF-PFMAHGHMIPIVDMAKLFATRGVKASVITTPA 73 (518)
Q Consensus 36 ~kI-l~~-~~~~~GH~~p~l~LA~~L~~rGH~Vt~~~~~~ 73 (518)
+|+ .|+ .-++-|-..-...||..|+++|+.|.++=...
T Consensus 2 ~~~I~v~s~kgGvGKTt~a~~LA~~la~~g~~VlliD~D~ 41 (263)
T 1hyq_A 2 VRTITVASGKGGTGKTTITANLGVALAQLGHDVTIVDADI 41 (263)
T ss_dssp CEEEEEEESSSCSCHHHHHHHHHHHHHHTTCCEEEEECCC
T ss_pred CeEEEEECCCCCCCHHHHHHHHHHHHHhCCCcEEEEECCC
Confidence 354 443 46688999999999999999999999997654
No 237
>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}
Probab=28.36 E-value=1.4e+02 Score=26.57 Aligned_cols=34 Identities=15% Similarity=-0.066 Sum_probs=25.3
Q ss_pred cEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCC
Q 010093 36 LHVFFFPFMAHGHMIPIVDMAKLFATRGVKASVITTP 72 (518)
Q Consensus 36 ~kIl~~~~~~~GH~~p~l~LA~~L~~rGH~Vt~~~~~ 72 (518)
-|++++..++.| --..+|+.|+++|++|.++.-.
T Consensus 7 ~k~vlVTGas~G---IG~aia~~l~~~G~~V~~~~r~ 40 (252)
T 3h7a_A 7 NATVAVIGAGDY---IGAEIAKKFAAEGFTVFAGRRN 40 (252)
T ss_dssp SCEEEEECCSSH---HHHHHHHHHHHTTCEEEEEESS
T ss_pred CCEEEEECCCch---HHHHHHHHHHHCCCEEEEEeCC
Confidence 356666665533 4678999999999999888653
No 238
>3e18_A Oxidoreductase; dehydrogenase, NAD-binding, structural genom protein structure initiative, PSI, NEW YORK structural GENO research consortium; HET: NAD; 1.95A {Listeria innocua}
Probab=28.33 E-value=3.5e+02 Score=25.43 Aligned_cols=109 Identities=21% Similarity=0.175 Sum_probs=62.2
Q ss_pred EEEEecCCcccCCHHHHHHHHHHHHhC-CCcEEEEEcCCCCCCCCCCCCCCChhHHHHHhcCCCcEeecCccHHHhhccC
Q 010093 316 VVYVCFGSLANFTSAQLMEIATGLEAS-GRNFIWVVSKNKNDGGEGGNEDWLPEGFEKRMEGKGLIIRGWAPQVLILDHE 394 (518)
Q Consensus 316 vIyvslGS~~~~~~~~~~~l~~al~~~-~~~~i~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~nv~~~~~~pq~~lL~~~ 394 (518)
+.+|.+|.+.. ..+.++... +.+++.+..... +... .....++ ..+-...++|..+
T Consensus 8 vgiiG~G~~g~-------~~~~~l~~~~~~~l~av~d~~~-------------~~~~-~a~~~g~--~~~~~~~~ll~~~ 64 (359)
T 3e18_A 8 LVIVGYGGMGS-------YHVTLASAADNLEVHGVFDILA-------------EKRE-AAAQKGL--KIYESYEAVLADE 64 (359)
T ss_dssp EEEECCSHHHH-------HHHHHHHTSTTEEEEEEECSSH-------------HHHH-HHHTTTC--CBCSCHHHHHHCT
T ss_pred EEEECcCHHHH-------HHHHHHHhCCCcEEEEEEcCCH-------------HHHH-HHHhcCC--ceeCCHHHHhcCC
Confidence 78888887652 234556655 445555544322 1111 1112243 2344678899877
Q ss_pred CCcccccccCch----hHHHHHHhCCceec-CCcc--cccchhHHHHHHhhhcceeeccc
Q 010093 395 AVGGFVTHCGWN----STLEAVAAGVPLVT-WPVA--AEQFYNEKMVNEILKIGVGVGIQ 447 (518)
Q Consensus 395 ~~~~~ItHgG~~----s~~eal~~GvP~l~-~P~~--~DQ~~na~~v~e~~G~G~~l~~~ 447 (518)
++++++--.... -+.+|+.+|+++++ -|+. .++-.-...++++.|+-+.+...
T Consensus 65 ~~D~V~i~tp~~~h~~~~~~al~aGkhVl~EKP~a~~~~ea~~l~~~a~~~g~~~~v~~~ 124 (359)
T 3e18_A 65 KVDAVLIATPNDSHKELAISALEAGKHVVCEKPVTMTSEDLLAIMDVAKRVNKHFMVHQN 124 (359)
T ss_dssp TCCEEEECSCGGGHHHHHHHHHHTTCEEEEESSCCSSHHHHHHHHHHHHHHTCCEEEECG
T ss_pred CCCEEEEcCCcHHHHHHHHHHHHCCCCEEeeCCCcCCHHHHHHHHHHHHHhCCeEEEEee
Confidence 777776544333 46788999999987 4543 34443333444677776666543
No 239
>2afh_E Nitrogenase iron protein 1; nitrogen fixation, iron-sulfur, metal-binding, molybdenum, oxidoreductase; HET: HCA CFN CLF PGE PG4 P6G 1PE; 2.10A {Azotobacter vinelandii} SCOP: c.37.1.10 PDB: 1g1m_A 1g5p_A 1m1y_E* 1m34_E* 1n2c_E* 1nip_A* 1fp6_A* 2afi_E* 2afk_E* 2nip_A 1de0_A 1xcp_A* 1xdb_A 1xd8_A 1xd9_A* 1g20_E* 1g21_E* 2c8v_A* 1rw4_A
Probab=28.19 E-value=62 Score=29.58 Aligned_cols=38 Identities=11% Similarity=0.116 Sum_probs=31.7
Q ss_pred cEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCCC
Q 010093 36 LHVFFFPFMAHGHMIPIVDMAKLFATRGVKASVITTPA 73 (518)
Q Consensus 36 ~kIl~~~~~~~GH~~p~l~LA~~L~~rGH~Vt~~~~~~ 73 (518)
..|.|..-|+-|-..-...||..|+++|++|.++=...
T Consensus 3 kvIavs~KGGvGKTT~a~nLA~~La~~G~rVlliD~D~ 40 (289)
T 2afh_E 3 RQCAIYGKGGIGKSTTTQNLVAALAEMGKKVMIVGCDP 40 (289)
T ss_dssp EEEEEEECTTSSHHHHHHHHHHHHHHTTCCEEEEEECS
T ss_pred eEEEEeCCCcCcHHHHHHHHHHHHHHCCCeEEEEecCC
Confidence 35667667799999999999999999999999885443
No 240
>2vpq_A Acetyl-COA carboxylase; bacteria, ATP-grAsp domain, biotin carboxylase, ligase; HET: ANP; 2.1A {Staphylococcus aureus}
Probab=28.16 E-value=1.2e+02 Score=29.74 Aligned_cols=32 Identities=16% Similarity=0.165 Sum_probs=24.0
Q ss_pred cEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCC
Q 010093 36 LHVFFFPFMAHGHMIPIVDMAKLFATRGVKASVITTP 72 (518)
Q Consensus 36 ~kIl~~~~~~~GH~~p~l~LA~~L~~rGH~Vt~~~~~ 72 (518)
.||+++-. | .....+++++.+.|++|+++.+.
T Consensus 2 k~ilI~g~---g--~~~~~i~~a~~~~G~~vv~v~~~ 33 (451)
T 2vpq_A 2 KKVLIANR---G--EIAVRIIRACRDLGIQTVAIYSE 33 (451)
T ss_dssp CEEEECCC---H--HHHHHHHHHHHHTTCEEEEEEEG
T ss_pred ceEEEeCC---C--HHHHHHHHHHHHcCCEEEEEecc
Confidence 47777642 2 25668999999999999988753
No 241
>2pl1_A Transcriptional regulatory protein PHOP; CHEY-like fold, response regulator, beryllium fluoride, transcription factor, activated, virulence; 1.90A {Escherichia coli} SCOP: c.23.1.1 PDB: 2pkx_A
Probab=28.12 E-value=1.1e+02 Score=22.65 Aligned_cols=39 Identities=26% Similarity=0.390 Sum_probs=25.4
Q ss_pred HHHHHhhCCCCEEEecCCCc--cHHHHHHH-----cCCCeEEEecc
Q 010093 139 LEQLLQEHKPDCLVADTFFP--WATDAAAK-----FGIPRLVFHGT 177 (518)
Q Consensus 139 l~~ll~~~~pDlVI~D~~~~--~~~~iA~~-----lgiP~v~~~~~ 177 (518)
..+.++..+||+||.|.... .+..+.+. -.+|++.++..
T Consensus 36 a~~~~~~~~~dlil~D~~l~~~~g~~~~~~l~~~~~~~~ii~~s~~ 81 (121)
T 2pl1_A 36 ADYYLNEHIPDIAIVDLGLPDEDGLSLIRRWRSNDVSLPILVLTAR 81 (121)
T ss_dssp HHHHHHHSCCSEEEECSCCSSSCHHHHHHHHHHTTCCSCEEEEESC
T ss_pred HHHHHhccCCCEEEEecCCCCCCHHHHHHHHHhcCCCCCEEEEecC
Confidence 34445667899999997654 34444443 25788887664
No 242
>3hn2_A 2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, structural GE protein structure initiative; 2.50A {Geobacter metallireducens}
Probab=28.10 E-value=49 Score=30.81 Aligned_cols=33 Identities=15% Similarity=0.162 Sum_probs=26.9
Q ss_pred cEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCCC
Q 010093 36 LHVFFFPFMAHGHMIPIVDMAKLFATRGVKASVITTPA 73 (518)
Q Consensus 36 ~kIl~~~~~~~GH~~p~l~LA~~L~~rGH~Vt~~~~~~ 73 (518)
|||+|+=.++.| ..+|..|.++||+|+++....
T Consensus 3 mkI~IiGaGaiG-----~~~a~~L~~~g~~V~~~~r~~ 35 (312)
T 3hn2_A 3 LRIAIVGAGALG-----LYYGALLQRSGEDVHFLLRRD 35 (312)
T ss_dssp -CEEEECCSTTH-----HHHHHHHHHTSCCEEEECSTT
T ss_pred CEEEEECcCHHH-----HHHHHHHHHCCCeEEEEEcCc
Confidence 589999777777 456889999999999998765
No 243
>1ehi_A LMDDL2, D-alanine:D-lactate ligase; ATP-binding. grAsp motif for ATP.; HET: ADP PHY; 2.38A {Leuconostoc mesenteroides} SCOP: c.30.1.2 d.142.1.1
Probab=28.03 E-value=51 Score=31.72 Aligned_cols=39 Identities=13% Similarity=-0.005 Sum_probs=28.7
Q ss_pred CCcEEEEEcCCCcc-C---hHHHHHHHHHH-HhCCCeEEEEeCC
Q 010093 34 PQLHVFFFPFMAHG-H---MIPIVDMAKLF-ATRGVKASVITTP 72 (518)
Q Consensus 34 ~~~kIl~~~~~~~G-H---~~p~l~LA~~L-~~rGH~Vt~~~~~ 72 (518)
.++||+++..+..+ | +.-...++++| .++||+|+.+...
T Consensus 2 ~k~~v~vl~gG~s~E~~vSl~s~~~v~~al~~~~g~~v~~i~~~ 45 (377)
T 1ehi_A 2 TKKRVALIFGGNSSEHDVSKRSAQNFYNAIEATGKYEIIVFAIA 45 (377)
T ss_dssp -CEEEEEEEECSSTTHHHHHHHHHHHHHHHHHHSSEEEEEEEEC
T ss_pred CCcEEEEEeCCCCCCcceeHHHHHHHHHHhCcccCcEEEEEEEc
Confidence 45899988765333 3 33578899999 9999999988643
No 244
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=27.86 E-value=37 Score=26.88 Aligned_cols=33 Identities=9% Similarity=0.087 Sum_probs=23.8
Q ss_pred CcEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCC
Q 010093 35 QLHVFFFPFMAHGHMIPIVDMAKLFATRGVKASVITTP 72 (518)
Q Consensus 35 ~~kIl~~~~~~~GH~~p~l~LA~~L~~rGH~Vt~~~~~ 72 (518)
+.||+++-. |.+ -..+++.|.++|++|+++...
T Consensus 6 ~~~v~I~G~---G~i--G~~~a~~l~~~g~~v~~~d~~ 38 (144)
T 2hmt_A 6 NKQFAVIGL---GRF--GGSIVKELHRMGHEVLAVDIN 38 (144)
T ss_dssp CCSEEEECC---SHH--HHHHHHHHHHTTCCCEEEESC
T ss_pred CCcEEEECC---CHH--HHHHHHHHHHCCCEEEEEeCC
Confidence 456877754 433 356789999999999988653
No 245
>1rcu_A Conserved hypothetical protein VT76; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.50A {Thermotoga maritima} SCOP: c.129.1.1
Probab=27.74 E-value=2.9e+02 Score=23.64 Aligned_cols=96 Identities=14% Similarity=0.147 Sum_probs=0.0
Q ss_pred hHHhHhhhcCCCCcEEEEecCCcccCCHHHHHHHHHHHHhCCCcEEEEEcCCCCCCCCCCCCCCChhHHHHHhcCCCcEe
Q 010093 302 LECLKWLNSKQPYSVVYVCFGSLANFTSAQLMEIATGLEASGRNFIWVVSKNKNDGGEGGNEDWLPEGFEKRMEGKGLII 381 (518)
Q Consensus 302 ~~l~~~l~~~~~~~vIyvslGS~~~~~~~~~~~l~~al~~~~~~~i~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~nv~~ 381 (518)
.++-++|...+ ..+|| |. ..-......++....+-.+|-+++... ...+ ...+.+
T Consensus 48 ~~lg~~LA~~G---~~vVs-Gg----~~GiM~aa~~gAl~~GG~~iGVlP~e~------~~~~-----------~~~~~~ 102 (195)
T 1rcu_A 48 LELGRTLAKKG---YLVFN-GG----RDGVMELVSQGVREAGGTVVGILPDEE------AGNP-----------YLSVAV 102 (195)
T ss_dssp HHHHHHHHHTT---CEEEE-CC----SSHHHHHHHHHHHHTTCCEEEEESTTC------CCCT-----------TCSEEE
T ss_pred HHHHHHHHHCC---CEEEe-CC----HHHHHHHHHHHHHHcCCcEEEEeCCcc------cCCC-----------Ccceee
Q ss_pred e--cCcc-HHHhhccCCCcccccccCchhHHHH---HHhCCceecCC
Q 010093 382 R--GWAP-QVLILDHEAVGGFVTHCGWNSTLEA---VAAGVPLVTWP 422 (518)
Q Consensus 382 ~--~~~p-q~~lL~~~~~~~~ItHgG~~s~~ea---l~~GvP~l~~P 422 (518)
. ...+ .+.++..-+-..++-=||.||..|+ +.+|+|++.++
T Consensus 103 ~~~~~f~~Rk~~m~~~sda~IvlpGG~GTL~E~~eal~~~kPV~lln 149 (195)
T 1rcu_A 103 KTGLDFQMRSFVLLRNADVVVSIGGEIGTAIEILGAYALGKPVILLR 149 (195)
T ss_dssp ECCCCHHHHHHHHHTTCSEEEEESCCHHHHHHHHHHHHTTCCEEEET
T ss_pred ecCCCHHHHHHHHHHhCCEEEEecCCCcHHHHHHHHHhcCCCEEEEC
No 246
>3i42_A Response regulator receiver domain protein (CHEY- like); structural genomics, PSI-2, protein structure initiative; 2.15A {Methylobacillus flagellatus KT} SCOP: c.23.1.0
Probab=27.69 E-value=77 Score=24.07 Aligned_cols=39 Identities=10% Similarity=0.031 Sum_probs=24.4
Q ss_pred HHHHHhhCCCCEEEecCCCc--cHHHHHHH-------cCCCeEEEecc
Q 010093 139 LEQLLQEHKPDCLVADTFFP--WATDAAAK-------FGIPRLVFHGT 177 (518)
Q Consensus 139 l~~ll~~~~pDlVI~D~~~~--~~~~iA~~-------lgiP~v~~~~~ 177 (518)
..+.+++.+||+||.|.... .+..+.+. .++|++.++..
T Consensus 39 a~~~l~~~~~dlii~D~~l~~~~g~~~~~~l~~~~~~~~~~ii~~s~~ 86 (127)
T 3i42_A 39 ALHAMSTRGYDAVFIDLNLPDTSGLALVKQLRALPMEKTSKFVAVSGF 86 (127)
T ss_dssp HHHHHHHSCCSEEEEESBCSSSBHHHHHHHHHHSCCSSCCEEEEEECC
T ss_pred HHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHhhhccCCCCEEEEECC
Confidence 33445667899999997554 35444443 34677776543
No 247
>1srr_A SPO0F, sporulation response regulatory protein; aspartate pocket, two component system; 1.90A {Bacillus subtilis} SCOP: c.23.1.1 PDB: 1pey_A 3q15_C 2ftk_E* 1fsp_A 1nat_A 1pux_A 2fsp_A 2jvj_A 2jvk_A 2jvi_A 1f51_E
Probab=27.55 E-value=75 Score=24.00 Aligned_cols=36 Identities=14% Similarity=0.354 Sum_probs=23.5
Q ss_pred HHhhCCCCEEEecCCCc--cHHHHHHHc-----CCCeEEEecc
Q 010093 142 LLQEHKPDCLVADTFFP--WATDAAAKF-----GIPRLVFHGT 177 (518)
Q Consensus 142 ll~~~~pDlVI~D~~~~--~~~~iA~~l-----giP~v~~~~~ 177 (518)
.++..+||+||.|...+ .+..+.+.+ ++|++.++..
T Consensus 42 ~~~~~~~dlvl~D~~l~~~~g~~~~~~l~~~~~~~~ii~~s~~ 84 (124)
T 1srr_A 42 IVTKERPDLVLLDMKIPGMDGIEILKRMKVIDENIRVIIMTAY 84 (124)
T ss_dssp HHHHHCCSEEEEESCCTTCCHHHHHHHHHHHCTTCEEEEEESS
T ss_pred HHhccCCCEEEEecCCCCCCHHHHHHHHHHhCCCCCEEEEEcc
Confidence 34455899999997654 354444433 6788887654
No 248
>2e6c_A 5'-nucleotidase SURE; SURE protein, cowith manganese ION and AMP hydrolase; 2.05A {Thermus thermophilus} PDB: 2e6b_A 2e69_A 2e6e_A 2e6g_A 2e6h_A
Probab=27.44 E-value=69 Score=28.74 Aligned_cols=57 Identities=5% Similarity=-0.004 Sum_probs=37.8
Q ss_pred cEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCCCCccchhhhhhhhhccCCCeEEEEee
Q 010093 36 LHVFFFPFMAHGHMIPIVDMAKLFATRGVKASVITTPANAPYVSKSVERANELGIEMDVKTIK 98 (518)
Q Consensus 36 ~kIl~~~~~~~GH~~p~l~LA~~L~~rGH~Vt~~~~~~~~~~~~~~~~~~~~~g~~i~~~~ip 98 (518)
||||+..--+. +---+..|+++|.+.| +|+++.|...+.-+..... ...++++..++
T Consensus 1 M~ILlTNDDGi-~apGi~aL~~~l~~~g-~V~VVAP~~~~Sg~g~siT----l~~pl~~~~~~ 57 (244)
T 2e6c_A 1 MRILVTNDDGI-YSPGLWALAEAASQFG-EVFVAAPDTEQSAAGHAIT----IAHPVRAYPHP 57 (244)
T ss_dssp CEEEEECSSCT-TCHHHHHHHHHHTTTS-EEEEEEECSSCCCCCSSCC----CSSCBEEEECC
T ss_pred CeEEEEcCCCC-CcHhHHHHHHHHHhCC-CEEEEecCCCCcCCccccc----CCCCeEEEEec
Confidence 57887775554 4445888999999988 8999999877665443211 12245565553
No 249
>3cg0_A Response regulator receiver modulated diguanylate with PAS/PAC sensor; signal receiver domain, diguanylate cyclase; 2.15A {Desulfovibrio desulfuricans subsp}
Probab=27.40 E-value=82 Score=24.34 Aligned_cols=38 Identities=16% Similarity=0.335 Sum_probs=24.6
Q ss_pred HHHhhCCCCEEEecCCCc---cHHHHHHH----cCCCeEEEecch
Q 010093 141 QLLQEHKPDCLVADTFFP---WATDAAAK----FGIPRLVFHGTS 178 (518)
Q Consensus 141 ~ll~~~~pDlVI~D~~~~---~~~~iA~~----lgiP~v~~~~~~ 178 (518)
+.++..+||+||+|.... .+..+.+. .++|++.++...
T Consensus 48 ~~~~~~~~dlii~d~~~~~~~~g~~~~~~l~~~~~~~ii~ls~~~ 92 (140)
T 3cg0_A 48 RCAPDLRPDIALVDIMLCGALDGVETAARLAAGCNLPIIFITSSQ 92 (140)
T ss_dssp HHHHHHCCSEEEEESSCCSSSCHHHHHHHHHHHSCCCEEEEECCC
T ss_pred HHHHhCCCCEEEEecCCCCCCCHHHHHHHHHhCCCCCEEEEecCC
Confidence 334456799999996542 34444443 479998887643
No 250
>4inf_A Metal-dependent hydrolase; amidohydrolase, metal binding site, enzyme functi initiative, EFI; 1.48A {Novosphingobium aromaticivorans} PDB: 4ing_A*
Probab=27.31 E-value=1.5e+02 Score=28.42 Aligned_cols=51 Identities=6% Similarity=-0.141 Sum_probs=32.0
Q ss_pred hHHhHhhhcCCCCcEEEEecCCcccCCHHHHHHHHHHHHhCCCcEEEEEcC
Q 010093 302 LECLKWLNSKQPYSVVYVCFGSLANFTSAQLMEIATGLEASGRNFIWVVSK 352 (518)
Q Consensus 302 ~~l~~~l~~~~~~~vIyvslGS~~~~~~~~~~~l~~al~~~~~~~i~~~~~ 352 (518)
+++.+..+..+=+++.+-+...-...+...+..+.+++++.+..+..=.+.
T Consensus 163 ~EL~r~~~~~G~~Gv~l~~~~~g~~l~d~~~~pi~~~~~e~g~pV~iH~g~ 213 (373)
T 4inf_A 163 REIHRGARELGFKGIQINSHTQGRYLDEEFFDPIFRALVEVDQPLYIHPAT 213 (373)
T ss_dssp HHHHHHHHTSCCCCEEECSCBTTBCTTSGGGHHHHHHHHHHTCCEEECCCC
T ss_pred HHHHHHHhhcCceEEEECCCCCCCCCCCcchHHHHHHHHHcCCeEEECCCC
Confidence 567777765344556543322112245567888999999999887665543
No 251
>2ph1_A Nucleotide-binding protein; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; 2.70A {Archaeoglobus fulgidus dsm 4304} PDB: 3kb1_A*
Probab=27.30 E-value=61 Score=29.15 Aligned_cols=41 Identities=12% Similarity=0.037 Sum_probs=31.7
Q ss_pred CcEE-EEEc-CCCccChHHHHHHHHHHHhCCCeEEEEeCCCCc
Q 010093 35 QLHV-FFFP-FMAHGHMIPIVDMAKLFATRGVKASVITTPANA 75 (518)
Q Consensus 35 ~~kI-l~~~-~~~~GH~~p~l~LA~~L~~rGH~Vt~~~~~~~~ 75 (518)
|+|+ +|+. -++-|=..-...||..|+++|++|.++=.....
T Consensus 17 ~~~vI~v~s~kGGvGKTT~a~nLA~~la~~G~~VlliD~D~~~ 59 (262)
T 2ph1_A 17 IKSRIAVMSGKGGVGKSTVTALLAVHYARQGKKVGILDADFLG 59 (262)
T ss_dssp CSCEEEEECSSSCTTHHHHHHHHHHHHHHTTCCEEEEECCSSC
T ss_pred CCeEEEEEcCCCCCCHHHHHHHHHHHHHHCCCeEEEEeCCCCC
Confidence 3454 4443 558899999999999999999999998665443
No 252
>3pdi_A Nitrogenase MOFE cofactor biosynthesis protein NI; nitrogenase cofactor maturation, NIFB, nifdk, NIFH; HET: CZL; 2.40A {Azotobacter vinelandii}
Probab=27.24 E-value=48 Score=33.28 Aligned_cols=36 Identities=25% Similarity=0.195 Sum_probs=28.0
Q ss_pred HHHHHHHHhhCCCCEEEecCCCccHHHHHHHcCCCeEEE
Q 010093 136 QEPLEQLLQEHKPDCLVADTFFPWATDAAAKFGIPRLVF 174 (518)
Q Consensus 136 ~~~l~~ll~~~~pDlVI~D~~~~~~~~iA~~lgiP~v~~ 174 (518)
..++.+++++.+||++|... ....+|+++|||++.+
T Consensus 390 ~~el~~~i~~~~pDL~ig~~---~~~~~a~k~gIP~~~~ 425 (483)
T 3pdi_A 390 ARVLLKTVDEYQADILIAGG---RNMYTALKGRVPFLDI 425 (483)
T ss_dssp HHHHHHHHHHTTCSEEECCG---GGHHHHHHTTCCBCCC
T ss_pred HHHHHHHHHhcCCCEEEECC---chhHHHHHcCCCEEEe
Confidence 34566777789999999874 3567899999998754
No 253
>2wm1_A 2-amino-3-carboxymuconate-6-semialdehyde decarboxylase; neurological disorders, metal-dependent amidohydrolase, kynurenine pathway; HET: 13P; 2.01A {Homo sapiens}
Probab=27.14 E-value=1.3e+02 Score=27.97 Aligned_cols=51 Identities=8% Similarity=-0.084 Sum_probs=30.9
Q ss_pred hHHhHhhhcCCCCcEEEEecCCcccCCHHHHHHHHHHHHhCCCcEEEEEcC
Q 010093 302 LECLKWLNSKQPYSVVYVCFGSLANFTSAQLMEIATGLEASGRNFIWVVSK 352 (518)
Q Consensus 302 ~~l~~~l~~~~~~~vIyvslGS~~~~~~~~~~~l~~al~~~~~~~i~~~~~ 352 (518)
+++..+++..+-+++-+-.-+.-.....+.+..+.+.+++.+..+++=.+.
T Consensus 127 ~el~~~~~~~g~~Gv~l~~~~~~~~l~d~~~~~~~~~~~e~~lpv~iH~~~ 177 (336)
T 2wm1_A 127 KEMERCVKELGFPGVQIGTHVNEWDLNAQELFPVYAAAERLKCSLFVHPWD 177 (336)
T ss_dssp HHHHHHHHTSCCSEEEEESEETTEETTCGGGHHHHHHHHHHTCEEEEECCS
T ss_pred HHHHHHHHccCCeEEEECCcCCCCCCCCccHHHHHHHHHHcCCEEEECCCC
Confidence 567777755444555332211111245567888999999999887766543
No 254
>3cu5_A Two component transcriptional regulator, ARAC FAM; structural genomics, protein structure initiative; 2.60A {Clostridium phytofermentans isdg}
Probab=27.14 E-value=86 Score=24.54 Aligned_cols=36 Identities=19% Similarity=0.393 Sum_probs=23.4
Q ss_pred HHHhhCCCCEEEecCCCc--cHHHHHHHc-----CCCeEEEec
Q 010093 141 QLLQEHKPDCLVADTFFP--WATDAAAKF-----GIPRLVFHG 176 (518)
Q Consensus 141 ~ll~~~~pDlVI~D~~~~--~~~~iA~~l-----giP~v~~~~ 176 (518)
+.+...+||+||.|...+ .+..+.+.+ ++|++.++.
T Consensus 43 ~~~~~~~~dlvllD~~lp~~~g~~l~~~l~~~~~~~~ii~ls~ 85 (141)
T 3cu5_A 43 QIALKHPPNVLLTDVRMPRMDGIELVDNILKLYPDCSVIFMSG 85 (141)
T ss_dssp HHHTTSCCSEEEEESCCSSSCHHHHHHHHHHHCTTCEEEEECC
T ss_pred HHHhcCCCCEEEEeCCCCCCCHHHHHHHHHhhCCCCcEEEEeC
Confidence 345567899999997654 355554433 577776654
No 255
>3pid_A UDP-glucose 6-dehydrogenase; rossmann fold, oxidoreductase; 1.40A {Klebsiella pneumoniae} PDB: 3pln_A* 3pjg_A* 3phl_A* 3plr_A*
Probab=27.00 E-value=42 Score=33.08 Aligned_cols=38 Identities=13% Similarity=0.073 Sum_probs=25.0
Q ss_pred CCCCCCCcEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCC
Q 010093 29 MGSEIPQLHVFFFPFMAHGHMIPIVDMAKLFATRGVKASVITTP 72 (518)
Q Consensus 29 m~~~~~~~kIl~~~~~~~GH~~p~l~LA~~L~~rGH~Vt~~~~~ 72 (518)
|..++++|||.|+=.+..| +++|..|++ ||+|+.+-..
T Consensus 30 ~~r~~~~mkIaVIGlG~mG-----~~lA~~La~-G~~V~~~D~~ 67 (432)
T 3pid_A 30 MGRGSEFMKITISGTGYVG-----LSNGVLIAQ-NHEVVALDIV 67 (432)
T ss_dssp -----CCCEEEEECCSHHH-----HHHHHHHHT-TSEEEEECSC
T ss_pred cccccCCCEEEEECcCHHH-----HHHHHHHHc-CCeEEEEecC
Confidence 4444677899998665544 467778887 9999987653
No 256
>2vrn_A Protease I, DR1199; cysteine sulfenic acid, DJ-1/THIJ/PFPI superfamily, protease hydrolase, stress response; 2.15A {Deinococcus radiodurans}
Probab=26.92 E-value=1.2e+02 Score=25.44 Aligned_cols=39 Identities=8% Similarity=0.048 Sum_probs=30.1
Q ss_pred CCcEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCCC
Q 010093 34 PQLHVFFFPFMAHGHMIPIVDMAKLFATRGVKASVITTPA 73 (518)
Q Consensus 34 ~~~kIl~~~~~~~GH~~p~l~LA~~L~~rGH~Vt~~~~~~ 73 (518)
+++||+|+.+++.. ..-+....+.|...|++|+++++..
T Consensus 8 ~~~~v~il~~~g~~-~~e~~~~~~~l~~ag~~v~~vs~~~ 46 (190)
T 2vrn_A 8 TGKKIAILAADGVE-EIELTSPRAAIEAAGGTTELISLEP 46 (190)
T ss_dssp TTCEEEEECCTTCB-HHHHHHHHHHHHHTTCEEEEEESSS
T ss_pred CCCEEEEEeCCCCC-HHHHHHHHHHHHHCCCEEEEEecCC
Confidence 45799998876654 4456667788899999999999854
No 257
>2fsv_C NAD(P) transhydrogenase subunit beta; NAD(P) transhydrogenase subunits, oxidoreductas; HET: NAD NAP; 2.30A {Rhodospirillum rubrum} SCOP: c.31.1.4 PDB: 1e3t_A* 1hzz_C* 1nm5_C* 1u28_C* 1u2d_C* 1u2g_C* 2fr8_C* 2frd_C*
Probab=26.91 E-value=61 Score=27.66 Aligned_cols=38 Identities=21% Similarity=0.301 Sum_probs=29.6
Q ss_pred cEEEEEcCCC---ccChHHHHHHHHHHHhCCCeEEEEeCCC
Q 010093 36 LHVFFFPFMA---HGHMIPIVDMAKLFATRGVKASVITTPA 73 (518)
Q Consensus 36 ~kIl~~~~~~---~GH~~p~l~LA~~L~~rGH~Vt~~~~~~ 73 (518)
-+|+|+|.-+ .=--++...|++.|.++|.+|.|..+|-
T Consensus 47 ~~ViIVPGYGmAVAqAQ~~v~el~~~L~~~G~~V~faIHPV 87 (203)
T 2fsv_C 47 SKVIIVPGYGMAVAQAQHALREMADVLKKEGVEVSYAIHPV 87 (203)
T ss_dssp SEEEEEECHHHHHHTCHHHHHHHHHHHHHTTCEEEEEECTT
T ss_pred CcEEEEcCchHhHHHHHHHHHHHHHHHHHcCCeEEEEeccc
Confidence 3788988431 1134578999999999999999999974
No 258
>3cmw_A Protein RECA, recombinase A; homologous recombination, recombination/DNA complex; HET: DNA ADP; 2.80A {Escherichia coli} PDB: 3cmt_A* 3cmx_A* 3cmv_A*
Probab=26.84 E-value=3.5e+02 Score=31.85 Aligned_cols=42 Identities=10% Similarity=0.061 Sum_probs=36.3
Q ss_pred EEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCCCCccch
Q 010093 37 HVFFFPFMAHGHMIPIVDMAKLFATRGVKASVITTPANAPYV 78 (518)
Q Consensus 37 kIl~~~~~~~GH~~p~l~LA~~L~~rGH~Vt~~~~~~~~~~~ 78 (518)
-|++.--|+.|-..-++.+|..+..+|..|.|++.+.....+
T Consensus 734 lVlI~G~PG~GKTtLal~lA~~aa~~g~~VlyiS~Ees~~ql 775 (1706)
T 3cmw_A 734 IVEIYGPESSGKTTLTLQVIAAAQREGKTCAFIDAEHALDPI 775 (1706)
T ss_dssp EEEEECSTTSSHHHHHHHHHHHHHHTTCCEEEECTTSCCCHH
T ss_pred eEEEECCCCCCcHHHHHHHHHHHHHcCCCeEEEeccchHHHH
Confidence 567777889999999999999999999999999998765544
No 259
>2qzj_A Two-component response regulator; 11017X, PSI-II, structural genomics; 2.89A {Clostridium difficile}
Probab=26.83 E-value=82 Score=24.49 Aligned_cols=38 Identities=11% Similarity=0.017 Sum_probs=25.4
Q ss_pred HHHHhhCCCCEEEecCCCc--cHHHHHHHc----CCCeEEEecc
Q 010093 140 EQLLQEHKPDCLVADTFFP--WATDAAAKF----GIPRLVFHGT 177 (518)
Q Consensus 140 ~~ll~~~~pDlVI~D~~~~--~~~~iA~~l----giP~v~~~~~ 177 (518)
.+.+...+||+||.|..++ .+..+.+.+ .+|++.++..
T Consensus 41 l~~~~~~~~dlvllD~~l~~~~g~~l~~~l~~~~~~~ii~ls~~ 84 (136)
T 2qzj_A 41 IGKIFSNKYDLIFLEIILSDGDGWTLCKKIRNVTTCPIVYMTYI 84 (136)
T ss_dssp HHHHHHCCCSEEEEESEETTEEHHHHHHHHHTTCCCCEEEEESC
T ss_pred HHHHHhcCCCEEEEeCCCCCCCHHHHHHHHccCCCCCEEEEEcC
Confidence 3445567899999997554 355555443 6788887654
No 260
>2dpo_A L-gulonate 3-dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Oryctolagus cuniculus} PDB: 2ep9_A* 3ado_A 3a97_A 3adp_A* 3f3s_A*
Probab=26.76 E-value=43 Score=31.50 Aligned_cols=35 Identities=20% Similarity=0.169 Sum_probs=25.7
Q ss_pred CCCcEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCC
Q 010093 33 IPQLHVFFFPFMAHGHMIPIVDMAKLFATRGVKASVITTP 72 (518)
Q Consensus 33 ~~~~kIl~~~~~~~GH~~p~l~LA~~L~~rGH~Vt~~~~~ 72 (518)
+++.||.|+=.+..| ..+|..|+++||+|++.-..
T Consensus 4 ~~~~kI~vIGaG~MG-----~~iA~~la~~G~~V~l~d~~ 38 (319)
T 2dpo_A 4 PAAGDVLIVGSGLVG-----RSWAMLFASGGFRVKLYDIE 38 (319)
T ss_dssp ---CEEEEECCSHHH-----HHHHHHHHHTTCCEEEECSC
T ss_pred CCCceEEEEeeCHHH-----HHHHHHHHHCCCEEEEEeCC
Confidence 456789988665544 67899999999999988653
No 261
>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti}
Probab=26.71 E-value=62 Score=29.55 Aligned_cols=33 Identities=18% Similarity=0.105 Sum_probs=25.4
Q ss_pred EEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCC
Q 010093 37 HVFFFPFMAHGHMIPIVDMAKLFATRGVKASVITTP 72 (518)
Q Consensus 37 kIl~~~~~~~GH~~p~l~LA~~L~~rGH~Vt~~~~~ 72 (518)
|++++..++.| --..+|+.|+++|++|.++...
T Consensus 29 k~~lVTGas~G---IG~aia~~la~~G~~V~~~~r~ 61 (283)
T 3v8b_A 29 PVALITGAGSG---IGRATALALAADGVTVGALGRT 61 (283)
T ss_dssp CEEEEESCSSH---HHHHHHHHHHHTTCEEEEEESS
T ss_pred CEEEEECCCCH---HHHHHHHHHHHCCCEEEEEeCC
Confidence 67777766543 4578999999999999887653
No 262
>3u7q_A Nitrogenase molybdenum-iron protein alpha chain; multiple rossmann fold domains, reductase, nitrogen fixing, oxidoreductase; HET: HCA ICS 1CL CLF; 1.00A {Azotobacter vinelandii} SCOP: c.92.2.3 PDB: 1g21_A* 1g20_A* 1fp4_A* 1m1n_A* 1l5h_A* 1m1y_A* 1m34_A* 1n2c_A* 2afh_A* 2afi_A* 2afk_A* 2min_A* 3min_A* 3k1a_A* 1h1l_A* 1qgu_A* 1qh1_A* 1qh8_A*
Probab=26.68 E-value=49 Score=33.28 Aligned_cols=35 Identities=23% Similarity=0.266 Sum_probs=27.3
Q ss_pred HHHHHHHhhCCCCEEEecCCCccHHHHHHHcCCCeEEE
Q 010093 137 EPLEQLLQEHKPDCLVADTFFPWATDAAAKFGIPRLVF 174 (518)
Q Consensus 137 ~~l~~ll~~~~pDlVI~D~~~~~~~~iA~~lgiP~v~~ 174 (518)
.++.+++++.+||++|... ....+|+++|||++.+
T Consensus 407 ~el~~~i~~~~pDL~ig~~---~~~~ia~k~gIP~~~~ 441 (492)
T 3u7q_A 407 YEFEEFVKRIKPDLIGSGI---KEKFIFQKMGIPFREM 441 (492)
T ss_dssp HHHHHHHHHHCCSEEEECH---HHHHHHHHTTCCEEES
T ss_pred HHHHHHHHhcCCcEEEeCc---chhHHHHHcCCCEEec
Confidence 3556667778999999973 4567999999999864
No 263
>3cz5_A Two-component response regulator, LUXR family; structural genomics, protein structure initiative; 2.70A {Aurantimonas SP}
Probab=26.59 E-value=1.1e+02 Score=24.06 Aligned_cols=39 Identities=26% Similarity=0.319 Sum_probs=25.0
Q ss_pred HHHHhhCCCCEEEecCCCc--cHHHHHHH-----cCCCeEEEecch
Q 010093 140 EQLLQEHKPDCLVADTFFP--WATDAAAK-----FGIPRLVFHGTS 178 (518)
Q Consensus 140 ~~ll~~~~pDlVI~D~~~~--~~~~iA~~-----lgiP~v~~~~~~ 178 (518)
.+.++..+||+||+|.... .+..+.+. -++|++.++...
T Consensus 44 ~~~l~~~~~dlii~D~~l~~~~g~~~~~~l~~~~~~~~ii~ls~~~ 89 (153)
T 3cz5_A 44 YRLYRETTPDIVVMDLTLPGPGGIEATRHIRQWDGAARILIFTMHQ 89 (153)
T ss_dssp HHHHHTTCCSEEEECSCCSSSCHHHHHHHHHHHCTTCCEEEEESCC
T ss_pred HHHHhcCCCCEEEEecCCCCCCHHHHHHHHHHhCCCCeEEEEECCC
Confidence 3445567899999997554 34444433 268888876543
No 264
>1mb3_A Cell division response regulator DIVK; signal transduction protein, structural proteomics in europe, spine, structural genomics; 1.41A {Caulobacter vibrioides} SCOP: c.23.1.1 PDB: 1m5u_A 1mav_A 1mb0_A 1m5t_A
Probab=26.56 E-value=77 Score=23.84 Aligned_cols=37 Identities=22% Similarity=0.386 Sum_probs=22.8
Q ss_pred HHHhhCCCCEEEecCCCc--cHHHHHHHc-------CCCeEEEecc
Q 010093 141 QLLQEHKPDCLVADTFFP--WATDAAAKF-------GIPRLVFHGT 177 (518)
Q Consensus 141 ~ll~~~~pDlVI~D~~~~--~~~~iA~~l-------giP~v~~~~~ 177 (518)
+.++..+||+||.|..+. .+..+.+.+ .+|++.++..
T Consensus 39 ~~~~~~~~dlvi~D~~l~~~~g~~~~~~l~~~~~~~~~~ii~~s~~ 84 (124)
T 1mb3_A 39 SIARENKPDLILMDIQLPEISGLEVTKWLKEDDDLAHIPVVAVTAF 84 (124)
T ss_dssp HHHHHHCCSEEEEESBCSSSBHHHHHHHHHHSTTTTTSCEEEEC--
T ss_pred HHHhcCCCCEEEEeCCCCCCCHHHHHHHHHcCccccCCcEEEEECC
Confidence 344556899999997654 355554433 5787776553
No 265
>2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa}
Probab=26.52 E-value=52 Score=30.19 Aligned_cols=35 Identities=6% Similarity=0.051 Sum_probs=24.9
Q ss_pred CcEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCCC
Q 010093 35 QLHVFFFPFMAHGHMIPIVDMAKLFATRGVKASVITTPA 73 (518)
Q Consensus 35 ~~kIl~~~~~~~GH~~p~l~LA~~L~~rGH~Vt~~~~~~ 73 (518)
|++|++. ++.|.+ -..|+++|+++||+|+.++-..
T Consensus 2 ~~~vlVt--GatG~i--G~~l~~~L~~~g~~V~~~~R~~ 36 (307)
T 2gas_A 2 ENKILIL--GPTGAI--GRHIVWASIKAGNPTYALVRKT 36 (307)
T ss_dssp CCCEEEE--STTSTT--HHHHHHHHHHHTCCEEEEECCS
T ss_pred CcEEEEE--CCCchH--HHHHHHHHHhCCCcEEEEECCC
Confidence 4566654 444554 4578999999999999887653
No 266
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=26.44 E-value=59 Score=24.49 Aligned_cols=33 Identities=18% Similarity=0.214 Sum_probs=24.0
Q ss_pred CcEEEEEcCCCccChHHHHHHHHHHHhCC-CeEEEEeCC
Q 010093 35 QLHVFFFPFMAHGHMIPIVDMAKLFATRG-VKASVITTP 72 (518)
Q Consensus 35 ~~kIl~~~~~~~GH~~p~l~LA~~L~~rG-H~Vt~~~~~ 72 (518)
+++|+++= + |.+ -..+++.|.++| |+|+++...
T Consensus 5 ~~~v~I~G--~-G~i--G~~~~~~l~~~g~~~v~~~~r~ 38 (118)
T 3ic5_A 5 RWNICVVG--A-GKI--GQMIAALLKTSSNYSVTVADHD 38 (118)
T ss_dssp CEEEEEEC--C-SHH--HHHHHHHHHHCSSEEEEEEESC
T ss_pred cCeEEEEC--C-CHH--HHHHHHHHHhCCCceEEEEeCC
Confidence 46788773 3 433 357899999999 999887653
No 267
>1u7z_A Coenzyme A biosynthesis bifunctional protein coabc; ligase; HET: PMT; 2.30A {Escherichia coli} SCOP: c.72.3.1 PDB: 1u7w_A* 1u7u_A* 1u80_A*
Probab=26.42 E-value=68 Score=28.43 Aligned_cols=23 Identities=22% Similarity=0.301 Sum_probs=19.7
Q ss_pred HHHHHHHHHHHhCCCeEEEEeCC
Q 010093 50 IPIVDMAKLFATRGVKASVITTP 72 (518)
Q Consensus 50 ~p~l~LA~~L~~rGH~Vt~~~~~ 72 (518)
-.-.++|++|+++|++|+++..+
T Consensus 35 ~iG~aiA~~~~~~Ga~V~l~~~~ 57 (226)
T 1u7z_A 35 KMGFAIAAAAARRGANVTLVSGP 57 (226)
T ss_dssp HHHHHHHHHHHHTTCEEEEEECS
T ss_pred HHHHHHHHHHHHCCCEEEEEECC
Confidence 45678999999999999998764
No 268
>2etv_A Iron(III) ABC transporter, periplasmic iron-bindi protein, putative; periplasmic iron-binding protein, structural genomics; HET: MLY; 1.70A {Thermotoga maritima} SCOP: c.92.2.4
Probab=26.41 E-value=49 Score=31.39 Aligned_cols=33 Identities=27% Similarity=0.275 Sum_probs=22.6
Q ss_pred HhhCCCCEEEecCCCc-cHHHHHHHcCCCeEEEe
Q 010093 143 LQEHKPDCLVADTFFP-WATDAAAKFGIPRLVFH 175 (518)
Q Consensus 143 l~~~~pDlVI~D~~~~-~~~~iA~~lgiP~v~~~ 175 (518)
+.+.+||+||+..... ....+.+.+|||++.+.
T Consensus 92 Ilal~PDLIi~~~~~~~~~~~~~~~~GiPvv~~~ 125 (346)
T 2etv_A 92 LITLQPDVVFITYVDRXTAXDIQEXTGIPVVVLS 125 (346)
T ss_dssp HHHHCCSEEEEESCCHHHHHHHHHHHTSCEEEEC
T ss_pred HhcCCCCEEEEeCCccchHHHHHHhcCCcEEEEe
Confidence 3346999999875432 23345677899999864
No 269
>3end_A Light-independent protochlorophyllide reductase iron-sulfur ATP-binding protein; BCHL, electron donor, DPOR, Fe protein, nitrogenase; HET: ADP; 1.63A {Rhodobacter sphaeroides 2} PDB: 3fwy_A*
Probab=26.41 E-value=72 Score=29.41 Aligned_cols=39 Identities=10% Similarity=0.062 Sum_probs=32.1
Q ss_pred CcEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCCC
Q 010093 35 QLHVFFFPFMAHGHMIPIVDMAKLFATRGVKASVITTPA 73 (518)
Q Consensus 35 ~~kIl~~~~~~~GH~~p~l~LA~~L~~rGH~Vt~~~~~~ 73 (518)
+..|+|+.-++-|=..-...||..|+++|+.|.++=...
T Consensus 41 ~~vI~v~~KGGvGKTT~a~nLA~~La~~G~~VlliD~D~ 79 (307)
T 3end_A 41 AKVFAVYGKGGIGKSTTSSNLSAAFSILGKRVLQIGCDP 79 (307)
T ss_dssp CEEEEEECSTTSSHHHHHHHHHHHHHHTTCCEEEEEESS
T ss_pred ceEEEEECCCCccHHHHHHHHHHHHHHCCCeEEEEeCCC
Confidence 334567777789999999999999999999999996543
No 270
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=26.36 E-value=44 Score=32.07 Aligned_cols=29 Identities=21% Similarity=0.268 Sum_probs=23.6
Q ss_pred cEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEE
Q 010093 36 LHVFFFPFMAHGHMIPIVDMAKLFATRGVKASVI 69 (518)
Q Consensus 36 ~kIl~~~~~~~GH~~p~l~LA~~L~~rGH~Vt~~ 69 (518)
|||+|+=.+-.| +.+|..|+++||+|+++
T Consensus 2 m~V~IVGaGpaG-----l~~A~~L~~~G~~v~v~ 30 (412)
T 4hb9_A 2 MHVGIIGAGIGG-----TCLAHGLRKHGIKVTIY 30 (412)
T ss_dssp CEEEEECCSHHH-----HHHHHHHHHTTCEEEEE
T ss_pred CEEEEECcCHHH-----HHHHHHHHhCCCCEEEE
Confidence 688888655433 77889999999999998
No 271
>2c20_A UDP-glucose 4-epimerase; carbohydrate metabolism, galactose metabolism, isomerase, NAD, spine; HET: NAD; 2.7A {Bacillus anthracis}
Probab=26.34 E-value=48 Score=30.81 Aligned_cols=34 Identities=12% Similarity=0.093 Sum_probs=23.2
Q ss_pred CcEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCC
Q 010093 35 QLHVFFFPFMAHGHMIPIVDMAKLFATRGVKASVITTP 72 (518)
Q Consensus 35 ~~kIl~~~~~~~GH~~p~l~LA~~L~~rGH~Vt~~~~~ 72 (518)
||+|++. ++.|- --..|++.|+++||+|+.+...
T Consensus 1 M~~ilVt--GatG~--iG~~l~~~L~~~g~~V~~~~r~ 34 (330)
T 2c20_A 1 MNSILIC--GGAGY--IGSHAVKKLVDEGLSVVVVDNL 34 (330)
T ss_dssp -CEEEEE--TTTSH--HHHHHHHHHHHTTCEEEEEECC
T ss_pred CCEEEEE--CCCcH--HHHHHHHHHHhCCCEEEEEeCC
Confidence 4566654 23333 3478899999999999988653
No 272
>1djl_A Transhydrogenase DIII; rossmann fold dinucleotide binding fold reverse binding of N oxidoreductase; HET: NAP; 2.00A {Homo sapiens} SCOP: c.31.1.4 PDB: 1pt9_A* 1u31_A*
Probab=26.32 E-value=64 Score=27.66 Aligned_cols=38 Identities=21% Similarity=0.332 Sum_probs=29.7
Q ss_pred cEEEEEcCCC---ccChHHHHHHHHHHHhCCCeEEEEeCCC
Q 010093 36 LHVFFFPFMA---HGHMIPIVDMAKLFATRGVKASVITTPA 73 (518)
Q Consensus 36 ~kIl~~~~~~---~GH~~p~l~LA~~L~~rGH~Vt~~~~~~ 73 (518)
-+|+|+|.-+ .=--++...|++.|.++|.+|.|+.+|-
T Consensus 46 ~~ViIVPGYGmAVAqAQ~~v~el~~~L~~~G~~V~faIHPV 86 (207)
T 1djl_A 46 NSIIITPGYGLCAAKAQYPIADLVKMLTEQGKKVRFGIHPV 86 (207)
T ss_dssp SEEEEEECHHHHHHTCHHHHHHHHHHHHHTTCEEEEEECTT
T ss_pred CeEEEECCchHHHHHHhHHHHHHHHHHHHCCCeEEEEeCcc
Confidence 3788988431 1234678999999999999999999974
No 273
>3f67_A Putative dienelactone hydrolase; alpha-beta-alpha sandwich, structural genomics, PSI-2, prote structure initiative; 1.74A {Klebsiella pneumoniae subsp}
Probab=26.13 E-value=88 Score=26.82 Aligned_cols=36 Identities=19% Similarity=0.139 Sum_probs=29.7
Q ss_pred cEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeC
Q 010093 36 LHVFFFPFMAHGHMIPIVDMAKLFATRGVKASVITT 71 (518)
Q Consensus 36 ~kIl~~~~~~~GH~~p~l~LA~~L~~rGH~Vt~~~~ 71 (518)
..++++.++..|+-.-+..+++.|+++|+.|..+-.
T Consensus 32 ~p~vv~~HG~~g~~~~~~~~~~~l~~~G~~v~~~d~ 67 (241)
T 3f67_A 32 LPIVIVVQEIFGVHEHIRDLCRRLAQEGYLAIAPEL 67 (241)
T ss_dssp EEEEEEECCTTCSCHHHHHHHHHHHHTTCEEEEECT
T ss_pred CCEEEEEcCcCccCHHHHHHHHHHHHCCcEEEEecc
Confidence 457777778778888899999999999998876654
No 274
>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}
Probab=26.11 E-value=58 Score=28.24 Aligned_cols=34 Identities=12% Similarity=0.173 Sum_probs=25.3
Q ss_pred CCcEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCC
Q 010093 34 PQLHVFFFPFMAHGHMIPIVDMAKLFATRGVKASVITTP 72 (518)
Q Consensus 34 ~~~kIl~~~~~~~GH~~p~l~LA~~L~~rGH~Vt~~~~~ 72 (518)
.++||.|+=.+..| ..+|..|+++||+|+++...
T Consensus 18 ~~~~I~iiG~G~mG-----~~la~~l~~~g~~V~~~~~~ 51 (209)
T 2raf_A 18 QGMEITIFGKGNMG-----QAIGHNFEIAGHEVTYYGSK 51 (209)
T ss_dssp --CEEEEECCSHHH-----HHHHHHHHHTTCEEEEECTT
T ss_pred CCCEEEEECCCHHH-----HHHHHHHHHCCCEEEEEcCC
Confidence 45789988655544 67899999999999988553
No 275
>1j9j_A Stationary phase surviVal protein; SURE protein, unknown function; 1.90A {Thermotoga maritima} SCOP: c.106.1.1 PDB: 1ilv_A 1j9k_A* 1j9l_A*
Probab=26.09 E-value=74 Score=28.61 Aligned_cols=42 Identities=10% Similarity=0.101 Sum_probs=31.6
Q ss_pred cEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCCCCccchh
Q 010093 36 LHVFFFPFMAHGHMIPIVDMAKLFATRGVKASVITTPANAPYVS 79 (518)
Q Consensus 36 ~kIl~~~~~~~GH~~p~l~LA~~L~~rGH~Vt~~~~~~~~~~~~ 79 (518)
||||+..--+. |---+..|+++|.+.| +|+++.|...++-+.
T Consensus 1 M~ILlTNDDGi-~apGi~aL~~~l~~~g-~V~VVAP~~~~Sg~g 42 (247)
T 1j9j_A 1 MRILVTNDDGI-QSKGIIVLAELLSEEH-EVFVVAPDKERSATG 42 (247)
T ss_dssp CEEEEECSSCT-TCHHHHHHHHHHTTTS-EEEEEEESSCCTTCT
T ss_pred CeEEEEcCCCC-CcHhHHHHHHHHHhCC-CEEEEecCCCCcCCc
Confidence 57877775554 4445888999999988 899999987665543
No 276
>2an1_A Putative kinase; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG, transferase; 2.00A {Salmonella typhimurium}
Probab=26.08 E-value=27 Score=32.28 Aligned_cols=27 Identities=15% Similarity=0.053 Sum_probs=0.0
Q ss_pred CcccccccCchhHHHHHHh----CCceecCC
Q 010093 396 VGGFVTHCGWNSTLEAVAA----GVPLVTWP 422 (518)
Q Consensus 396 ~~~~ItHgG~~s~~eal~~----GvP~l~~P 422 (518)
++++|.-||-||+.+++.. ++|+++++
T Consensus 64 ~D~vi~~GGDGT~l~a~~~~~~~~~P~lGI~ 94 (292)
T 2an1_A 64 ADLAVVVGGDGNMLGAARTLARYDINVIGIN 94 (292)
T ss_dssp CSEEEECSCHHHHHHHHHHHTTSSCEEEEBC
T ss_pred CCEEEEEcCcHHHHHHHHHhhcCCCCEEEEE
No 277
>3u7q_B Nitrogenase molybdenum-iron protein beta chain; multiple rossmann fold domains, reductase, nitrogen fixing, oxidoreductase; HET: HCA ICS 1CL CLF; 1.00A {Azotobacter vinelandii} SCOP: c.92.2.3 PDB: 1fp4_B* 1g21_B* 1g20_B* 1m1n_B* 1l5h_B* 1m1y_B* 1m34_B* 1n2c_B* 2afh_B* 2afi_B* 2afk_B* 2min_B* 3k1a_B* 3min_B*
Probab=26.03 E-value=68 Score=32.54 Aligned_cols=34 Identities=18% Similarity=0.385 Sum_probs=25.3
Q ss_pred HHHHHHhhCCCCEEEecCCCccHHHHHHHc-------CCCeEEE
Q 010093 138 PLEQLLQEHKPDCLVADTFFPWATDAAAKF-------GIPRLVF 174 (518)
Q Consensus 138 ~l~~ll~~~~pDlVI~D~~~~~~~~iA~~l-------giP~v~~ 174 (518)
++.+++++.+||+||.... +..+|+++ |||++.+
T Consensus 429 ~l~~~i~~~~pDLlig~s~---~k~~a~~~~~~~~~~giP~iri 469 (523)
T 3u7q_B 429 HLRSLVFTDKPDFMIGNSY---GKFIQRDTLHKGKEFEVPLIRI 469 (523)
T ss_dssp HHHHHHHHTCCSEEEECTT---HHHHHHHHHHHCGGGCCCEEEC
T ss_pred HHHHHHHhcCCCEEEECcc---HHHHHHHhhcccccCCCceEEe
Confidence 4555666789999999953 34577777 9999875
No 278
>4dzz_A Plasmid partitioning protein PARF; deviant walker BOX, DNA segregation, unknown function; HET: ADP; 1.80A {Escherichia coli} PDB: 4e03_A* 4e07_A* 4e09_A*
Probab=26.00 E-value=67 Score=27.25 Aligned_cols=36 Identities=19% Similarity=0.434 Sum_probs=30.0
Q ss_pred EEEE-cCCCccChHHHHHHHHHHHhCCCeEEEEeCCC
Q 010093 38 VFFF-PFMAHGHMIPIVDMAKLFATRGVKASVITTPA 73 (518)
Q Consensus 38 Il~~-~~~~~GH~~p~l~LA~~L~~rGH~Vt~~~~~~ 73 (518)
|.|+ +-++-|-..-...||..|+++|++|.++-...
T Consensus 4 i~v~s~kgG~GKTt~a~~la~~la~~g~~vlliD~D~ 40 (206)
T 4dzz_A 4 ISFLNPKGGSGKTTAVINIATALSRSGYNIAVVDTDP 40 (206)
T ss_dssp EEECCSSTTSSHHHHHHHHHHHHHHTTCCEEEEECCT
T ss_pred EEEEeCCCCccHHHHHHHHHHHHHHCCCeEEEEECCC
Confidence 4455 35688999999999999999999999997753
No 279
>3nrb_A Formyltetrahydrofolate deformylase; N-terminal ACT domain, structural genomics, joint center for structural genomics, JCSG; HET: MSE FLC; 2.05A {Pseudomonas putida}
Probab=25.97 E-value=3.8e+02 Score=24.48 Aligned_cols=107 Identities=7% Similarity=0.071 Sum_probs=0.0
Q ss_pred CCCcEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCCCCc---cchhhhhhhhhccCCCeEEEEeeCCCccCCCCCC
Q 010093 33 IPQLHVFFFPFMAHGHMIPIVDMAKLFATRGVKASVITTPANA---PYVSKSVERANELGIEMDVKTIKFPSVEAGLPEG 109 (518)
Q Consensus 33 ~~~~kIl~~~~~~~GH~~p~l~LA~~L~~rGH~Vt~~~~~~~~---~~~~~~~~~~~~~g~~i~~~~ip~~~~~~~l~~~ 109 (518)
.+++||+++..+. ||-.-.+--+..--+-..+|..+.+..-. ...++. ++.+..+|
T Consensus 86 ~~~~ri~vl~Sg~-g~nl~~ll~~~~~g~l~~~i~~Visn~~~a~~~~A~~~---------gIp~~~~~----------- 144 (287)
T 3nrb_A 86 TDRKKVVIMVSKF-DHCLGDLLYRHRLGELDMEVVGIISNHPREALSVSLVG---------DIPFHYLP----------- 144 (287)
T ss_dssp TCCCEEEEEECSC-CHHHHHHHHHHHHTSSCCEEEEEEESSCGGGCCCCCCT---------TSCEEECC-----------
T ss_pred CCCcEEEEEEeCC-CcCHHHHHHHHHCCCCCeEEEEEEeCChHHHHHHHHHc---------CCCEEEEe-----------
Q ss_pred CCccccccchhhhhhHHHHHHHHHhhHHHHHHHHhhCCCCEEEecCCCc-cHHHHHHHcCCCeEEEecc
Q 010093 110 CENLDAITNEVNKGLIVKFFGATMKLQEPLEQLLQEHKPDCLVADTFFP-WATDAAAKFGIPRLVFHGT 177 (518)
Q Consensus 110 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~~pDlVI~D~~~~-~~~~iA~~lgiP~v~~~~~ 177 (518)
... ..-....+.+.+++++.++|+||.-.|+. ....+-..+.-.++-++++
T Consensus 145 -------------~~~----~~r~~~~~~~~~~l~~~~~Dlivlagym~il~~~~l~~~~~~~iNiHpS 196 (287)
T 3nrb_A 145 -------------VTP----ATKAAQESQIKNIVTQSQADLIVLARYMQILSDDLSAFLSGRCINIHHS 196 (287)
T ss_dssp -------------CCG----GGHHHHHHHHHHHHHHHTCSEEEESSCCSCCCHHHHHHHTTSEEEEESS
T ss_pred -------------ccC----cchhhHHHHHHHHHHHhCCCEEEhhhhhhhcCHHHHhhccCCeEEECcc
No 280
>3fet_A Electron transfer flavoprotein subunit alpha RELA protein; alpha-beta-alpha sandwich, structural genomics, PSI-2; HET: MSE; 2.05A {Thermoplasma acidophilum}
Probab=25.85 E-value=87 Score=26.15 Aligned_cols=39 Identities=13% Similarity=-0.079 Sum_probs=29.7
Q ss_pred HHHHHHHhhCCCCEEEecCCCc---cHHHHHHHcCCCeEEEecc
Q 010093 137 EPLEQLLQEHKPDCLVADTFFP---WATDAAAKFGIPRLVFHGT 177 (518)
Q Consensus 137 ~~l~~ll~~~~pDlVI~D~~~~---~~~~iA~~lgiP~v~~~~~ 177 (518)
+.+.++++ +||+|++..... .+..+|.++|+|.+.-.+.
T Consensus 61 ~~l~~~~~--~p~~Vl~g~t~~g~~vaprlAa~L~~~~~sdv~~ 102 (166)
T 3fet_A 61 EGILKIAG--NYDYIAIGSTEVGREIAGYLSFKTGFYTATEIFS 102 (166)
T ss_dssp HHHHHHHT--TCSEEEEECSHHHHHHHHHHHHHHCCCEEEEEEE
T ss_pred HHHHHHHc--CCCEEEEcCCCccccHHHHHHHHhCCCceeeEEE
Confidence 34555565 899999986443 4788999999999986654
No 281
>3afo_A NADH kinase POS5; alpha/beta+BETA sandwich, ATP-binding, mitochondrion NADP, nucleotide-binding, transferase, transit peptide; HET: NAI; 2.00A {Saccharomyces cerevisiae}
Probab=25.78 E-value=47 Score=32.19 Aligned_cols=35 Identities=23% Similarity=0.342 Sum_probs=25.7
Q ss_pred HHHhhccCCCcccccccCchhHHHHHHh----CC-ceecCCc
Q 010093 387 QVLILDHEAVGGFVTHCGWNSTLEAVAA----GV-PLVTWPV 423 (518)
Q Consensus 387 q~~lL~~~~~~~~ItHgG~~s~~eal~~----Gv-P~l~~P~ 423 (518)
..++-.. ++++|+=||-||+..|+.. ++ |++++..
T Consensus 108 ~~~~~~~--~DlVIvlGGDGTlL~aa~~~~~~~vpPiLGIN~ 147 (388)
T 3afo_A 108 EQDIVNR--TDLLVTLGGDGTILHGVSMFGNTQVPPVLAFAL 147 (388)
T ss_dssp HHHHHHH--CSEEEEEESHHHHHHHHHTTTTSCCCCEEEEEC
T ss_pred hhhcccC--CCEEEEEeCcHHHHHHHHHhcccCCCeEEEEEC
Confidence 3444444 4559999999999999754 57 7888863
No 282
>2lnd_A De novo designed protein, PFK fold; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Artificial gene}
Probab=25.76 E-value=78 Score=22.51 Aligned_cols=50 Identities=22% Similarity=0.205 Sum_probs=32.7
Q ss_pred HhCCceecCCcccccchhHHHHH--HhhhcceeeccccccccccCccChHHHHHHHHHHhc
Q 010093 413 AAGVPLVTWPVAAEQFYNEKMVN--EILKIGVGVGIQKWCRIVGDFVKRETIEKAVNEIMV 471 (518)
Q Consensus 413 ~~GvP~l~~P~~~DQ~~na~~v~--e~~G~G~~l~~~~~~~~~~~~~~~~~l~~av~~ll~ 471 (518)
-.|+|.+++-....|.+.-..-. +.-|+.-.+-+ ..++++|.+.+++.|.
T Consensus 49 dngkplvvfvngasqndvnefqneakkegvsydvlk---------stdpeeltqrvreflk 100 (112)
T 2lnd_A 49 DNGKPLVVFVNGASQNDVNEFQNEAKKEGVSYDVLK---------STDPEELTQRVREFLK 100 (112)
T ss_dssp TCCSCEEEEECSCCHHHHHHHHHHHHHHTCEEEEEE---------CCCHHHHHHHHHHHHH
T ss_pred hcCCeEEEEecCcccccHHHHHHHHHhcCcchhhhc---------cCCHHHHHHHHHHHHH
Confidence 36889888877666644322111 34466655544 5799999999998885
No 283
>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus}
Probab=25.54 E-value=54 Score=30.66 Aligned_cols=33 Identities=24% Similarity=0.260 Sum_probs=27.0
Q ss_pred cEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCCC
Q 010093 36 LHVFFFPFMAHGHMIPIVDMAKLFATRGVKASVITTPA 73 (518)
Q Consensus 36 ~kIl~~~~~~~GH~~p~l~LA~~L~~rGH~Vt~~~~~~ 73 (518)
|||+|+=.++.| ..+|..|.+.||+|+++....
T Consensus 3 mkI~IiGaGaiG-----~~~a~~L~~~g~~V~~~~r~~ 35 (320)
T 3i83_A 3 LNILVIGTGAIG-----SFYGALLAKTGHCVSVVSRSD 35 (320)
T ss_dssp CEEEEESCCHHH-----HHHHHHHHHTTCEEEEECSTT
T ss_pred CEEEEECcCHHH-----HHHHHHHHhCCCeEEEEeCCh
Confidence 689998666655 467889999999999998865
No 284
>1qkk_A DCTD, C4-dicarboxylate transport transcriptional regulatory protein; receiver domain, 2-component signal transduction; 1.7A {Sinorhizobium meliloti} SCOP: c.23.1.1 PDB: 1l5z_A 1l5y_A
Probab=25.46 E-value=85 Score=24.96 Aligned_cols=41 Identities=15% Similarity=0.143 Sum_probs=26.7
Q ss_pred HHHHHhhCCCCEEEecCCCc--cHHHHHHHc-----CCCeEEEecchH
Q 010093 139 LEQLLQEHKPDCLVADTFFP--WATDAAAKF-----GIPRLVFHGTSF 179 (518)
Q Consensus 139 l~~ll~~~~pDlVI~D~~~~--~~~~iA~~l-----giP~v~~~~~~~ 179 (518)
..+.+...+||+||+|.... .+..+.+.+ ++|++.++....
T Consensus 39 a~~~l~~~~~dliild~~l~~~~g~~~~~~l~~~~~~~pii~ls~~~~ 86 (155)
T 1qkk_A 39 ALAGLSADFAGIVISDIRMPGMDGLALFRKILALDPDLPMILVTGHGD 86 (155)
T ss_dssp HHHTCCTTCCSEEEEESCCSSSCHHHHHHHHHHHCTTSCEEEEECGGG
T ss_pred HHHHHHhCCCCEEEEeCCCCCCCHHHHHHHHHhhCCCCCEEEEECCCC
Confidence 34445567899999997554 344444432 789988876543
No 285
>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}
Probab=25.45 E-value=66 Score=29.07 Aligned_cols=34 Identities=12% Similarity=0.094 Sum_probs=25.5
Q ss_pred CcEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCCC
Q 010093 35 QLHVFFFPFMAHGHMIPIVDMAKLFATRGVKASVITTPA 73 (518)
Q Consensus 35 ~~kIl~~~~~~~GH~~p~l~LA~~L~~rGH~Vt~~~~~~ 73 (518)
||||++. |+ |.+ -..|++.|.++||+|+.++-..
T Consensus 5 ~~~ilVt--Ga-G~i--G~~l~~~L~~~g~~V~~~~r~~ 38 (286)
T 3ius_A 5 TGTLLSF--GH-GYT--ARVLSRALAPQGWRIIGTSRNP 38 (286)
T ss_dssp CCEEEEE--TC-CHH--HHHHHHHHGGGTCEEEEEESCG
T ss_pred cCcEEEE--CC-cHH--HHHHHHHHHHCCCEEEEEEcCh
Confidence 3577776 34 544 4678999999999999987643
No 286
>3aek_B Light-independent protochlorophyllide reductase S; iron/sulfur cluster, oxidoreductase, bacteriochlorophyll biosynthesis; HET: PMR; 2.30A {Rhodobacter capsulatus} PDB: 3aeq_B* 3aer_B 3aes_B* 3aeu_B 3aet_B
Probab=25.39 E-value=52 Score=33.39 Aligned_cols=35 Identities=20% Similarity=0.454 Sum_probs=26.7
Q ss_pred HHHHHHhhCCCCEEEecCCCccHHHHHHHcCCCeEEEe
Q 010093 138 PLEQLLQEHKPDCLVADTFFPWATDAAAKFGIPRLVFH 175 (518)
Q Consensus 138 ~l~~ll~~~~pDlVI~D~~~~~~~~iA~~lgiP~v~~~ 175 (518)
++.+++++.+||++|.+. ....+|+++|||++.+.
T Consensus 340 el~~~i~~~~pDL~ig~~---~~~~~a~~~giP~~~i~ 374 (525)
T 3aek_B 340 EVEKAIEAAAPELILGTQ---MERNIAKKLGLPCAVIS 374 (525)
T ss_dssp HHHHHHHHHCCSEEEECH---HHHHHHHHHTCCEEECS
T ss_pred HHHHHHhhcCCCEEEecc---hhHHHHHHcCCCEEEec
Confidence 455566667999999873 46778899999998743
No 287
>3ea0_A ATPase, para family; alpha-beta-alpha sandwich, structural genomics, PSI-2, prote structure initiative; HET: ATP; 2.20A {Chlorobium tepidum}
Probab=25.38 E-value=53 Score=28.92 Aligned_cols=41 Identities=12% Similarity=0.137 Sum_probs=32.2
Q ss_pred CCcEEE-EE-cCCCccChHHHHHHHHHHHhC-CCeEEEEeCCCC
Q 010093 34 PQLHVF-FF-PFMAHGHMIPIVDMAKLFATR-GVKASVITTPAN 74 (518)
Q Consensus 34 ~~~kIl-~~-~~~~~GH~~p~l~LA~~L~~r-GH~Vt~~~~~~~ 74 (518)
+++||+ |+ +-++-|-..-...||..|+++ |+.|.++=....
T Consensus 2 ~~~~vI~v~s~kGGvGKTt~a~~LA~~la~~~g~~VlliD~D~~ 45 (245)
T 3ea0_A 2 NAKRVFGFVSAKGGDGGSCIAANFAFALSQEPDIHVLAVDISLP 45 (245)
T ss_dssp -CCEEEEEEESSTTSSHHHHHHHHHHHHTTSTTCCEEEEECCTT
T ss_pred CCCeEEEEECCCCCcchHHHHHHHHHHHHhCcCCCEEEEECCCC
Confidence 456654 44 356899999999999999999 999999976543
No 288
>1p6q_A CHEY2; chemotaxis, signal transduction, response regulator, structural proteomics in europe, spine, structural genomics; NMR {Sinorhizobium meliloti} SCOP: c.23.1.1 PDB: 1p6u_A
Probab=25.37 E-value=94 Score=23.57 Aligned_cols=38 Identities=5% Similarity=0.126 Sum_probs=24.3
Q ss_pred HHHHhhCCCCEEEecCCCc--cHHHHHHHc-------CCCeEEEecc
Q 010093 140 EQLLQEHKPDCLVADTFFP--WATDAAAKF-------GIPRLVFHGT 177 (518)
Q Consensus 140 ~~ll~~~~pDlVI~D~~~~--~~~~iA~~l-------giP~v~~~~~ 177 (518)
.+.++..+||+||.|...+ .+..+.+.+ ++|++.++..
T Consensus 44 ~~~~~~~~~dlvl~D~~l~~~~g~~~~~~l~~~~~~~~~~ii~~s~~ 90 (129)
T 1p6q_A 44 MKIMAQNPHHLVISDFNMPKMDGLGLLQAVRANPATKKAAFIILTAQ 90 (129)
T ss_dssp HHHHHTSCCSEEEECSSSCSSCHHHHHHHHTTCTTSTTCEEEECCSC
T ss_pred HHHHHcCCCCEEEEeCCCCCCCHHHHHHHHhcCccccCCCEEEEeCC
Confidence 3445567899999997665 455555544 4566665543
No 289
>1ydh_A AT5G11950; structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG; 2.15A {Arabidopsis thaliana} SCOP: c.129.1.1 PDB: 2q4d_A
Probab=25.16 E-value=1.9e+02 Score=25.23 Aligned_cols=97 Identities=11% Similarity=0.054 Sum_probs=0.0
Q ss_pred hHHhHhhhcCCCCcEEEEecCCcccCCHHHHHHHHHHHHhCCCcEEEEEcCCCCCCCCCCCCCCChhHHHHHhcCCC---
Q 010093 302 LECLKWLNSKQPYSVVYVCFGSLANFTSAQLMEIATGLEASGRNFIWVVSKNKNDGGEGGNEDWLPEGFEKRMEGKG--- 378 (518)
Q Consensus 302 ~~l~~~l~~~~~~~vIyvslGS~~~~~~~~~~~l~~al~~~~~~~i~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~n--- 378 (518)
.++-+++..++ ..+|+=|. +.-......++....+-++|-+ +|+.+.....+.|
T Consensus 31 ~~lg~~LA~~g---~~lV~GGg----~~GlM~aa~~gA~~~GG~~iGv----------------~p~~l~~~e~~~~~~~ 87 (216)
T 1ydh_A 31 IELGNELVKRK---IDLVYGGG----SVGLMGLISRRVYEGGLHVLGI----------------IPKALMPIEISGETVG 87 (216)
T ss_dssp HHHHHHHHHTT---CEEEECCC----SSHHHHHHHHHHHHTTCCEEEE----------------EEGGGHHHHCCSSCCS
T ss_pred HHHHHHHHHCC---CEEEECCC----cccHhHHHHHHHHHcCCcEEEE----------------echhcCccccccCCCC
Q ss_pred -cEeecCcc-HHHhhccCCCcccccccCchhHHHHH---------HhCCceecC
Q 010093 379 -LIIRGWAP-QVLILDHEAVGGFVTHCGWNSTLEAV---------AAGVPLVTW 421 (518)
Q Consensus 379 -v~~~~~~p-q~~lL~~~~~~~~ItHgG~~s~~eal---------~~GvP~l~~ 421 (518)
+.+++.++ .+.++..-+-..++--||.||.-|.. .+++|++.+
T Consensus 88 ~~~~~~~~~~Rk~~~~~~sda~I~lpGG~GTLdElfE~lt~~qlg~~~kPvvll 141 (216)
T 1ydh_A 88 DVRVVADMHERKAAMAQEAEAFIALPGGYGTMEELLEMITWSQLGIHKKTVGLL 141 (216)
T ss_dssp EEEEESSHHHHHHHHHHHCSEEEECSCSHHHHHHHHHHHHHHHHTSCCCEEEEE
T ss_pred cccccCCHHHHHHHHHHhCCEEEEeCCCccHHHHHHHHHHHHHhcccCCCEEEe
No 290
>3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, 3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus thuringiensis serovar kurstakorganism_taxid} SCOP: c.2.1.0
Probab=25.13 E-value=84 Score=28.04 Aligned_cols=35 Identities=6% Similarity=-0.040 Sum_probs=26.4
Q ss_pred CcEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCC
Q 010093 35 QLHVFFFPFMAHGHMIPIVDMAKLFATRGVKASVITTP 72 (518)
Q Consensus 35 ~~kIl~~~~~~~GH~~p~l~LA~~L~~rGH~Vt~~~~~ 72 (518)
++|.+++..++. .--..+|+.|+++|++|.++...
T Consensus 6 ~~k~vlVTGas~---gIG~~~a~~l~~~G~~v~~~~~~ 40 (264)
T 3i4f_A 6 FVRHALITAGTK---GLGKQVTEKLLAKGYSVTVTYHS 40 (264)
T ss_dssp CCCEEEETTTTS---HHHHHHHHHHHHTTCEEEEEESS
T ss_pred ccCEEEEeCCCc---hhHHHHHHHHHHCCCEEEEEcCC
Confidence 467777776653 23578999999999999988654
No 291
>3eul_A Possible nitrate/nitrite response transcriptional regulatory protein NARL (DNA-binding...; central beta strand flanked by alpha helices; 1.90A {Mycobacterium tuberculosis}
Probab=25.04 E-value=82 Score=24.96 Aligned_cols=41 Identities=22% Similarity=0.276 Sum_probs=26.4
Q ss_pred HHHHHHHhhCCCCEEEecCCCc--cHHHHHHHc-----CCCeEEEecc
Q 010093 137 EPLEQLLQEHKPDCLVADTFFP--WATDAAAKF-----GIPRLVFHGT 177 (518)
Q Consensus 137 ~~l~~ll~~~~pDlVI~D~~~~--~~~~iA~~l-----giP~v~~~~~ 177 (518)
.+..+.++..+||+||.|.... .+..+.+.+ ++|++.++..
T Consensus 51 ~~a~~~l~~~~~dlii~d~~l~~~~g~~~~~~l~~~~~~~~ii~~s~~ 98 (152)
T 3eul_A 51 AAALELIKAHLPDVALLDYRMPGMDGAQVAAAVRSYELPTRVLLISAH 98 (152)
T ss_dssp HHHHHHHHHHCCSEEEEETTCSSSCHHHHHHHHHHTTCSCEEEEEESC
T ss_pred HHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHhcCCCCeEEEEEcc
Confidence 3445556667899999997654 344444433 5777777654
No 292
>3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis}
Probab=25.03 E-value=80 Score=28.96 Aligned_cols=34 Identities=12% Similarity=0.173 Sum_probs=24.6
Q ss_pred CcEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCC
Q 010093 35 QLHVFFFPFMAHGHMIPIVDMAKLFATRGVKASVITTP 72 (518)
Q Consensus 35 ~~kIl~~~~~~~GH~~p~l~LA~~L~~rGH~Vt~~~~~ 72 (518)
+++|++. |+.|. --..|++.|.++||+|+.+.-.
T Consensus 7 ~~~vlVt--GatG~--iG~~l~~~L~~~g~~V~~~~r~ 40 (321)
T 3vps_A 7 KHRILIT--GGAGF--IGGHLARALVASGEEVTVLDDL 40 (321)
T ss_dssp CCEEEEE--TTTSH--HHHHHHHHHHHTTCCEEEECCC
T ss_pred CCeEEEE--CCCCh--HHHHHHHHHHHCCCEEEEEecC
Confidence 4677665 33343 3568999999999999998764
No 293
>1jbe_A Chemotaxis protein CHEY; signaling protein; 1.08A {Escherichia coli} SCOP: c.23.1.1 PDB: 3chy_A 1a0o_A 1cey_A 1bdj_A 1eay_A 1f4v_A 1ffg_A 1ffs_A 1ffw_A 1fqw_A 2b1j_A 1chn_A 1djm_A 1kmi_Y* 1d4z_A 3olx_A 3olw_A 1cye_A 2che_A 2chf_A ...
Probab=25.02 E-value=1.2e+02 Score=22.85 Aligned_cols=38 Identities=16% Similarity=0.171 Sum_probs=25.0
Q ss_pred HHHHhhCCCCEEEecCCCc--cHHHHHHHc-------CCCeEEEecc
Q 010093 140 EQLLQEHKPDCLVADTFFP--WATDAAAKF-------GIPRLVFHGT 177 (518)
Q Consensus 140 ~~ll~~~~pDlVI~D~~~~--~~~~iA~~l-------giP~v~~~~~ 177 (518)
.+.+...+||+||.|...+ .+..+.+.+ .+|++.++..
T Consensus 42 ~~~~~~~~~dlvi~D~~l~~~~g~~l~~~l~~~~~~~~~~ii~~s~~ 88 (128)
T 1jbe_A 42 LNKLQAGGYGFVISDWNMPNMDGLELLKTIRAXXAMSALPVLMVTAE 88 (128)
T ss_dssp HHHHTTCCCCEEEEESCCSSSCHHHHHHHHHC--CCTTCCEEEEESS
T ss_pred HHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHhhcccCCCcEEEEecC
Confidence 3445567899999997665 455555543 4677777654
No 294
>1ks9_A KPA reductase;, 2-dehydropantoate 2-reductase; PANE, APBA, ketopantoate reductase, rossman fold, monomer, APO, oxidoreductase; 1.70A {Escherichia coli} SCOP: a.100.1.7 c.2.1.6 PDB: 1yon_A* 1yjq_A* 2ofp_A*
Probab=25.02 E-value=57 Score=29.67 Aligned_cols=32 Identities=9% Similarity=0.009 Sum_probs=24.5
Q ss_pred cEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCC
Q 010093 36 LHVFFFPFMAHGHMIPIVDMAKLFATRGVKASVITTP 72 (518)
Q Consensus 36 ~kIl~~~~~~~GH~~p~l~LA~~L~~rGH~Vt~~~~~ 72 (518)
|||+|+=.+..| ..+|..|.++||+|+++...
T Consensus 1 m~i~iiG~G~~G-----~~~a~~l~~~g~~V~~~~r~ 32 (291)
T 1ks9_A 1 MKITVLGCGALG-----QLWLTALCKQGHEVQGWLRV 32 (291)
T ss_dssp CEEEEECCSHHH-----HHHHHHHHHTTCEEEEECSS
T ss_pred CeEEEECcCHHH-----HHHHHHHHhCCCCEEEEEcC
Confidence 477777555544 47899999999999998654
No 295
>3lte_A Response regulator; structural genomics, PSI, protein structure initiative, NYSG YORK structural genomix research consortium, nysgxrc; 2.00A {Bermanella marisrubri}
Probab=25.02 E-value=1.2e+02 Score=22.99 Aligned_cols=38 Identities=16% Similarity=0.250 Sum_probs=23.0
Q ss_pred HHHHhhCCCCEEEecCCCc--cHHHHHHHc------CCCeEEEecc
Q 010093 140 EQLLQEHKPDCLVADTFFP--WATDAAAKF------GIPRLVFHGT 177 (518)
Q Consensus 140 ~~ll~~~~pDlVI~D~~~~--~~~~iA~~l------giP~v~~~~~ 177 (518)
.+.++..+||+||+|.... .+..+.+.+ ..|.+.+.+.
T Consensus 43 ~~~l~~~~~dlii~d~~l~~~~g~~~~~~l~~~~~~~~~~ii~~~~ 88 (132)
T 3lte_A 43 GIKLSTFEPAIMTLDLSMPKLDGLDVIRSLRQNKVANQPKILVVSG 88 (132)
T ss_dssp HHHHHHTCCSEEEEESCBTTBCHHHHHHHHHTTTCSSCCEEEEECC
T ss_pred HHHHHhcCCCEEEEecCCCCCCHHHHHHHHHhcCccCCCeEEEEeC
Confidence 3345567899999997665 355555443 3455555443
No 296
>2xdq_B Light-independent protochlorophyllide reductase S; oxidoreductase, DPOR, (bacterio)chlorophyll biosynthesis, photosynthesis; 2.40A {Thermosynechococcus elongatus}
Probab=24.94 E-value=54 Score=33.16 Aligned_cols=35 Identities=11% Similarity=0.242 Sum_probs=26.2
Q ss_pred HHHHHHhhCCCCEEEecCCCccHHHHHHHcCCCeEEEe
Q 010093 138 PLEQLLQEHKPDCLVADTFFPWATDAAAKFGIPRLVFH 175 (518)
Q Consensus 138 ~l~~ll~~~~pDlVI~D~~~~~~~~iA~~lgiP~v~~~ 175 (518)
++.+++++.+||++|.+ .....+|+++|||++.+.
T Consensus 363 el~~~i~~~~pDl~ig~---~~~r~~a~k~gip~~~i~ 397 (511)
T 2xdq_B 363 VVGDAIARVEPAAIFGT---QMERHVGKRLNIPCGVIA 397 (511)
T ss_dssp HHHHHHHHHCCSEEEEC---HHHHHHHHHHTCCEEECS
T ss_pred HHHHHHHhcCCCEEEec---cchHHHHHhcCCCeEecc
Confidence 45556666789999987 346678899999998753
No 297
>4gbj_A 6-phosphogluconate dehydrogenase NAD-binding; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.05A {Dyadobacter fermentans}
Probab=24.94 E-value=64 Score=29.89 Aligned_cols=29 Identities=17% Similarity=0.307 Sum_probs=24.4
Q ss_pred EEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEe
Q 010093 37 HVFFFPFMAHGHMIPIVDMAKLFATRGVKASVIT 70 (518)
Q Consensus 37 kIl~~~~~~~GH~~p~l~LA~~L~~rGH~Vt~~~ 70 (518)
||.|+=.+..| .++|+.|+++||+|++.-
T Consensus 7 kIgfIGLG~MG-----~~mA~~L~~~G~~V~v~d 35 (297)
T 4gbj_A 7 KIAFLGLGNLG-----TPIAEILLEAGYELVVWN 35 (297)
T ss_dssp EEEEECCSTTH-----HHHHHHHHHTTCEEEEC-
T ss_pred cEEEEecHHHH-----HHHHHHHHHCCCeEEEEe
Confidence 89999888777 578999999999998763
No 298
>3mjf_A Phosphoribosylamine--glycine ligase; structural genomics, CEN structural genomics of infectious diseases, csgid; HET: MSE PGE; 1.47A {Yersinia pestis} PDB: 1gso_A
Probab=24.92 E-value=60 Score=31.92 Aligned_cols=26 Identities=4% Similarity=-0.052 Sum_probs=19.7
Q ss_pred CCcEEEEEcCCCccChHHHHHHHHHHHhCCC
Q 010093 34 PQLHVFFFPFMAHGHMIPIVDMAKLFATRGV 64 (518)
Q Consensus 34 ~~~kIl~~~~~~~GH~~p~l~LA~~L~~rGH 64 (518)
.|||||++-.+++ -.+||+.|++.+.
T Consensus 2 ~~mkvlviG~ggr-----e~ala~~l~~s~~ 27 (431)
T 3mjf_A 2 NAMNILIIGNGGR-----EHALGWKAAQSPL 27 (431)
T ss_dssp -CEEEEEEECSHH-----HHHHHHHHTTCTT
T ss_pred CCcEEEEECCCHH-----HHHHHHHHHhCCC
Confidence 3689999977754 4478999998875
No 299
>3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens}
Probab=24.91 E-value=47 Score=30.44 Aligned_cols=32 Identities=19% Similarity=0.135 Sum_probs=25.1
Q ss_pred CcEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeC
Q 010093 35 QLHVFFFPFMAHGHMIPIVDMAKLFATRGVKASVITT 71 (518)
Q Consensus 35 ~~kIl~~~~~~~GH~~p~l~LA~~L~~rGH~Vt~~~~ 71 (518)
|+||.|+=.+..| ..+|+.|+++||+|++...
T Consensus 1 M~~I~iiG~G~mG-----~~~a~~l~~~G~~V~~~dr 32 (287)
T 3pdu_A 1 MTTYGFLGLGIMG-----GPMAANLVRAGFDVTVWNR 32 (287)
T ss_dssp CCCEEEECCSTTH-----HHHHHHHHHHTCCEEEECS
T ss_pred CCeEEEEccCHHH-----HHHHHHHHHCCCeEEEEcC
Confidence 4688888666655 4678999999999998754
No 300
>3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti}
Probab=24.89 E-value=70 Score=29.12 Aligned_cols=33 Identities=12% Similarity=0.049 Sum_probs=25.4
Q ss_pred cEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeC
Q 010093 36 LHVFFFPFMAHGHMIPIVDMAKLFATRGVKASVITT 71 (518)
Q Consensus 36 ~kIl~~~~~~~GH~~p~l~LA~~L~~rGH~Vt~~~~ 71 (518)
.|++++..++.| --..+|+.|+++|++|.++..
T Consensus 25 ~k~~lVTGas~G---IG~~ia~~la~~G~~V~~~~r 57 (281)
T 3v2h_A 25 TKTAVITGSTSG---IGLAIARTLAKAGANIVLNGF 57 (281)
T ss_dssp TCEEEEETCSSH---HHHHHHHHHHHTTCEEEEECC
T ss_pred CCEEEEeCCCcH---HHHHHHHHHHHCCCEEEEEeC
Confidence 467777766543 457899999999999988765
No 301
>2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A*
Probab=24.88 E-value=71 Score=30.52 Aligned_cols=35 Identities=14% Similarity=0.059 Sum_probs=25.3
Q ss_pred CCcEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCC
Q 010093 34 PQLHVFFFPFMAHGHMIPIVDMAKLFATRGVKASVITTP 72 (518)
Q Consensus 34 ~~~kIl~~~~~~~GH~~p~l~LA~~L~~rGH~Vt~~~~~ 72 (518)
+|++|++. ++.|- --..|++.|+++||+|+.+.-.
T Consensus 28 ~~~~vlVt--GatG~--iG~~l~~~L~~~g~~V~~~~r~ 62 (379)
T 2c5a_A 28 ENLKISIT--GAGGF--IASHIARRLKHEGHYVIASDWK 62 (379)
T ss_dssp SCCEEEEE--TTTSH--HHHHHHHHHHHTTCEEEEEESS
T ss_pred cCCeEEEE--CCccH--HHHHHHHHHHHCCCeEEEEECC
Confidence 45677665 33343 3567899999999999988764
No 302
>1u0t_A Inorganic polyphosphate/ATP-NAD kinase; alpha-beta, beta sandwich, structural genomics, PSI, protein structure initiative; 2.30A {Mycobacterium tuberculosis} SCOP: e.52.1.1 PDB: 1u0r_A 1y3i_A* 1y3h_A
Probab=24.81 E-value=63 Score=30.09 Aligned_cols=37 Identities=8% Similarity=0.173 Sum_probs=28.5
Q ss_pred CcEEEEEcCCCccChH-HHHHHHHHHHhCCCeEEEEeC
Q 010093 35 QLHVFFFPFMAHGHMI-PIVDMAKLFATRGVKASVITT 71 (518)
Q Consensus 35 ~~kIl~~~~~~~GH~~-p~l~LA~~L~~rGH~Vt~~~~ 71 (518)
|.||+++..+..++.. ....+.+.|.++|++|.+..+
T Consensus 4 m~ki~iI~n~~~~~~~~~~~~l~~~L~~~g~~v~~~~~ 41 (307)
T 1u0t_A 4 HRSVLLVVHTGRDEATETARRVEKVLGDNKIALRVLSA 41 (307)
T ss_dssp -CEEEEEESSSGGGGSHHHHHHHHHHHTTTCEEEEEC-
T ss_pred CCEEEEEEeCCCHHHHHHHHHHHHHHHHCCCEEEEecc
Confidence 5689999998777654 477888999999999887644
No 303
>3jte_A Response regulator receiver protein; structural genomics, nysgrc, response regulator receiver DOM target 11226E, PSI-2; 1.90A {Clostridium thermocellum atcc 27405}
Probab=24.74 E-value=1.1e+02 Score=23.78 Aligned_cols=34 Identities=15% Similarity=0.300 Sum_probs=23.0
Q ss_pred hCCCCEEEecCCCc--cHHHHHHHc-----CCCeEEEecch
Q 010093 145 EHKPDCLVADTFFP--WATDAAAKF-----GIPRLVFHGTS 178 (518)
Q Consensus 145 ~~~pDlVI~D~~~~--~~~~iA~~l-----giP~v~~~~~~ 178 (518)
..+||+||+|.... .+..+.+.+ ++|++.++...
T Consensus 47 ~~~~dlvi~d~~l~~~~g~~~~~~l~~~~~~~~ii~ls~~~ 87 (143)
T 3jte_A 47 CNSIDVVITDMKMPKLSGMDILREIKKITPHMAVIILTGHG 87 (143)
T ss_dssp TTTCCEEEEESCCSSSCHHHHHHHHHHHCTTCEEEEEECTT
T ss_pred CCCCCEEEEeCCCCCCcHHHHHHHHHHhCCCCeEEEEECCC
Confidence 46899999997655 354444433 67888776643
No 304
>1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2
Probab=24.68 E-value=69 Score=29.32 Aligned_cols=35 Identities=14% Similarity=0.136 Sum_probs=24.4
Q ss_pred CcEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCCC
Q 010093 35 QLHVFFFPFMAHGHMIPIVDMAKLFATRGVKASVITTPA 73 (518)
Q Consensus 35 ~~kIl~~~~~~~GH~~p~l~LA~~L~~rGH~Vt~~~~~~ 73 (518)
|++|++. |+.|.+ -..|++.|+++||+|+.++-..
T Consensus 4 ~~~ilVt--GatG~i--G~~l~~~L~~~g~~V~~l~R~~ 38 (308)
T 1qyc_A 4 RSRILLI--GATGYI--GRHVAKASLDLGHPTFLLVRES 38 (308)
T ss_dssp CCCEEEE--STTSTT--HHHHHHHHHHTTCCEEEECCCC
T ss_pred CCEEEEE--cCCcHH--HHHHHHHHHhCCCCEEEEECCc
Confidence 4566654 333444 3578999999999999877643
No 305
>1z7e_A Protein aRNA; rossmann fold, OB-like fold, hydrolase; HET: ATP UGA; 3.00A {Escherichia coli} SCOP: b.46.1.1 c.2.1.2 c.65.1.1
Probab=24.61 E-value=1.2e+02 Score=31.56 Aligned_cols=40 Identities=10% Similarity=0.096 Sum_probs=26.9
Q ss_pred HHHHHHhhCCCCEEEecCCCc-cHHHHHHHcCCCeEEEecc
Q 010093 138 PLEQLLQEHKPDCLVADTFFP-WATDAAAKFGIPRLVFHGT 177 (518)
Q Consensus 138 ~l~~ll~~~~pDlVI~D~~~~-~~~~iA~~lgiP~v~~~~~ 177 (518)
.+.+.+++.+||+||+-.+.. ....+-......++-++++
T Consensus 66 ~~~~~l~~~~~d~iv~~~~~~il~~~~l~~~~~~~iNiH~s 106 (660)
T 1z7e_A 66 LWVERIAQLSPDVIFSFYYRHLIYDEILQLAPAGAFNLHGS 106 (660)
T ss_dssp HHHHHHHHHCCSEEEEESCCSCCCHHHHTTCTTCEEEEESS
T ss_pred HHHHHHHhcCCCEEEEcCcccccCHHHHhcCCCCeEEecCC
Confidence 345566777999999876654 4445555556667777765
No 306
>1e4e_A Vancomycin/teicoplanin A-type resistance protein; ligase, cell WALL, antibiotic resistance, membrane, peptidog synthesis; HET: ADP PHY; 2.5A {Enterococcus faecium} SCOP: c.30.1.2 d.142.1.1 PDB: 1e4e_B*
Probab=24.58 E-value=45 Score=31.54 Aligned_cols=38 Identities=11% Similarity=0.062 Sum_probs=27.5
Q ss_pred CCcEEEEEcCCCcc--C---hHHHHHHHHHHHhCCCeEEEEeCC
Q 010093 34 PQLHVFFFPFMAHG--H---MIPIVDMAKLFATRGVKASVITTP 72 (518)
Q Consensus 34 ~~~kIl~~~~~~~G--H---~~p~l~LA~~L~~rGH~Vt~~~~~ 72 (518)
+++||+++..+ .| | +.-...++++|.+.||+|..+...
T Consensus 2 ~~~~v~vl~gG-~s~E~~vs~~s~~~v~~al~~~g~~v~~i~~~ 44 (343)
T 1e4e_A 2 NRIKVAILFGG-CSEEHDVSVKSAIEIAANINKEKYEPLYIGIT 44 (343)
T ss_dssp CCEEEEEEEEC-SSTTHHHHHHHHHHHHHHSCTTTEEEEEEEEC
T ss_pred CCcEEEEEeCC-CCCCcchhHHHHHHHHHHhhhcCCEEEEEEEc
Confidence 46788877644 34 2 225677899999999999988653
No 307
>3g79_A NDP-N-acetyl-D-galactosaminuronic acid dehydrogen; structural genomics, protein structure initiative; 2.40A {Methanosarcina mazei GO1}
Probab=24.57 E-value=74 Score=31.81 Aligned_cols=35 Identities=20% Similarity=0.148 Sum_probs=28.9
Q ss_pred CCcEEEEEcCCCccChHHHHHHHHHHHhC-CC-eEEEEeCCC
Q 010093 34 PQLHVFFFPFMAHGHMIPIVDMAKLFATR-GV-KASVITTPA 73 (518)
Q Consensus 34 ~~~kIl~~~~~~~GH~~p~l~LA~~L~~r-GH-~Vt~~~~~~ 73 (518)
++|||.|+=.+..| +++|..|+++ || +|+++-...
T Consensus 17 ~~mkIaVIGlG~mG-----~~lA~~la~~~G~~~V~~~D~~~ 53 (478)
T 3g79_A 17 PIKKIGVLGMGYVG-----IPAAVLFADAPCFEKVLGFQRNS 53 (478)
T ss_dssp SCCEEEEECCSTTH-----HHHHHHHHHSTTCCEEEEECCCC
T ss_pred CCCEEEEECcCHHH-----HHHHHHHHHhCCCCeEEEEECCh
Confidence 46899999777776 5789999999 99 999986654
No 308
>1iow_A DD-ligase, DDLB, D-ALA\:D-Ala ligase; glycogen phosphorylase, cell WALL, peptidoglycan synthesis, vancomycin, ADP binding; HET: ADP PHY; 1.90A {Escherichia coli} SCOP: c.30.1.2 d.142.1.1 PDB: 1iov_A* 2dln_A* 3v4z_A*
Probab=24.54 E-value=1e+02 Score=28.19 Aligned_cols=38 Identities=5% Similarity=-0.065 Sum_probs=27.6
Q ss_pred cEEEEEcCCC-ccChH---HHHHHHHHHHhCCCeEEEEeCCC
Q 010093 36 LHVFFFPFMA-HGHMI---PIVDMAKLFATRGVKASVITTPA 73 (518)
Q Consensus 36 ~kIl~~~~~~-~GH~~---p~l~LA~~L~~rGH~Vt~~~~~~ 73 (518)
+||+++..+. .-|-. ....++++|.++||+|.++....
T Consensus 3 ~~i~il~gg~s~e~~~s~~~~~~l~~al~~~G~~v~~~~~~~ 44 (306)
T 1iow_A 3 DKIAVLLGGTSAEREVSLNSGAAVLAGLREGGIDAYPVDPKE 44 (306)
T ss_dssp CEEEEECCCSSTTHHHHHHHHHHHHHHHHHTTCEEEEECTTT
T ss_pred cEEEEEeCCCCccceEcHHhHHHHHHHHHHCCCeEEEEecCc
Confidence 5888887543 22322 44689999999999999988763
No 309
>3gi1_A LBP, laminin-binding protein of group A streptococci; zinc-binding receptor, metal-binding, helical backbone, alpha/beta domains; 2.45A {Streptococcus pyogenes} PDB: 3hjt_A
Probab=24.48 E-value=3.2e+02 Score=24.91 Aligned_cols=40 Identities=13% Similarity=0.138 Sum_probs=32.6
Q ss_pred HHHHHHHHhhCCCCEEEecCCCc--cHHHHHHHcCCCeEEEe
Q 010093 136 QEPLEQLLQEHKPDCLVADTFFP--WATDAAAKFGIPRLVFH 175 (518)
Q Consensus 136 ~~~l~~ll~~~~pDlVI~D~~~~--~~~~iA~~lgiP~v~~~ 175 (518)
...+.+.+++.+..+|+++..+. .+-.+|+..|++++.+.
T Consensus 217 l~~l~~~ik~~~v~~if~e~~~~~~~~~~la~~~g~~v~~l~ 258 (286)
T 3gi1_A 217 LKEIQDFVKEYNVKTIFAEDNVNPKIAHAIAKSTGAKVKTLS 258 (286)
T ss_dssp HHHHHHHHHHTTCCEEEECTTSCTHHHHHHHHTTTCEEEECC
T ss_pred HHHHHHHHHHcCCCEEEEeCCCChHHHHHHHHHhCCeEEEec
Confidence 45677778889999999998665 56788999999988753
No 310
>4h15_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, nysgrc; HET: MSE; 1.45A {Sinorhizobium meliloti} PDB: 4h16_A*
Probab=24.47 E-value=98 Score=27.97 Aligned_cols=32 Identities=13% Similarity=0.107 Sum_probs=26.7
Q ss_pred EEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeC
Q 010093 37 HVFFFPFMAHGHMIPIVDMAKLFATRGVKASVITT 71 (518)
Q Consensus 37 kIl~~~~~~~GH~~p~l~LA~~L~~rGH~Vt~~~~ 71 (518)
|+++++.++.| --.++|+.|+++|++|.+..-
T Consensus 12 K~alVTGas~G---IG~aia~~la~~Ga~V~~~~r 43 (261)
T 4h15_A 12 KRALITAGTKG---AGAATVSLFLELGAQVLTTAR 43 (261)
T ss_dssp CEEEESCCSSH---HHHHHHHHHHHTTCEEEEEES
T ss_pred CEEEEeccCcH---HHHHHHHHHHHcCCEEEEEEC
Confidence 78889887765 457899999999999988765
No 311
>1yt5_A Inorganic polyphosphate/ATP-NAD kinase; domain 1: alpha/beta domain2: beta sandwich, structural genomics, PSI, protein structure initiative; 2.30A {Thermotoga maritima}
Probab=24.44 E-value=23 Score=32.18 Aligned_cols=52 Identities=17% Similarity=0.197 Sum_probs=36.7
Q ss_pred CcccccccCchhHHHHHHh---CCceecCCcccccchhHHHHHHhhhcceeeccccccccccCccChHHHHHHHHHHhcC
Q 010093 396 VGGFVTHCGWNSTLEAVAA---GVPLVTWPVAAEQFYNEKMVNEILKIGVGVGIQKWCRIVGDFVKRETIEKAVNEIMVG 472 (518)
Q Consensus 396 ~~~~ItHgG~~s~~eal~~---GvP~l~~P~~~DQ~~na~~v~e~~G~G~~l~~~~~~~~~~~~~~~~~l~~av~~ll~~ 472 (518)
++++|+-||-||+.+++.. ++|+++++. + ..|.-. .+.++++.++++++++|
T Consensus 42 ~D~vv~~GGDGTll~~a~~~~~~~PilGIn~-G-----------~~Gfl~-------------~~~~~~~~~al~~i~~g 96 (258)
T 1yt5_A 42 ADLIVVVGGDGTVLKAAKKAADGTPMVGFKA-G-----------RLGFLT-------------SYTLDEIDRFLEDLRNW 96 (258)
T ss_dssp CSEEEEEECHHHHHHHHTTBCTTCEEEEEES-S-----------SCCSSC-------------CBCGGGHHHHHHHHHTT
T ss_pred CCEEEEEeCcHHHHHHHHHhCCCCCEEEEEC-C-----------CCCccC-------------cCCHHHHHHHHHHHHcC
Confidence 5569999999999999887 788888863 2 011111 24567788888888763
No 312
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=24.43 E-value=61 Score=29.67 Aligned_cols=33 Identities=12% Similarity=-0.085 Sum_probs=25.1
Q ss_pred CCcEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeC
Q 010093 34 PQLHVFFFPFMAHGHMIPIVDMAKLFATRGVKASVITT 71 (518)
Q Consensus 34 ~~~kIl~~~~~~~GH~~p~l~LA~~L~~rGH~Vt~~~~ 71 (518)
.+.||.|+=.+.. -..+|..|+++||+|+++..
T Consensus 3 ~~~kV~VIGaG~m-----G~~iA~~la~~G~~V~l~d~ 35 (283)
T 4e12_A 3 GITNVTVLGTGVL-----GSQIAFQTAFHGFAVTAYDI 35 (283)
T ss_dssp SCCEEEEECCSHH-----HHHHHHHHHHTTCEEEEECS
T ss_pred CCCEEEEECCCHH-----HHHHHHHHHhCCCeEEEEeC
Confidence 3568998844443 36799999999999998754
No 313
>3obi_A Formyltetrahydrofolate deformylase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 1.95A {Rhodopseudomonas palustris}
Probab=24.38 E-value=4.1e+02 Score=24.27 Aligned_cols=107 Identities=7% Similarity=0.086 Sum_probs=0.0
Q ss_pred CCCcEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCCC---CccchhhhhhhhhccCCCeEEEEeeCCCccCCCCCC
Q 010093 33 IPQLHVFFFPFMAHGHMIPIVDMAKLFATRGVKASVITTPA---NAPYVSKSVERANELGIEMDVKTIKFPSVEAGLPEG 109 (518)
Q Consensus 33 ~~~~kIl~~~~~~~GH~~p~l~LA~~L~~rGH~Vt~~~~~~---~~~~~~~~~~~~~~~g~~i~~~~ip~~~~~~~l~~~ 109 (518)
.+++||+++..+. ||-.-.+--+..--+-..+|..+.+.. .....++. ++.+..+| ...
T Consensus 87 ~~~~ri~vl~Sg~-g~nl~~ll~~~~~g~l~~~i~~Visn~p~~~~~~A~~~---------gIp~~~~~--------~~~ 148 (288)
T 3obi_A 87 ETRRKVMLLVSQS-DHCLADILYRWRVGDLHMIPTAIVSNHPRETFSGFDFG---------DIPFYHFP--------VNK 148 (288)
T ss_dssp TSCEEEEEEECSC-CHHHHHHHHHHHTTSSCEEEEEEEESSCGGGSCCTTTT---------TCCEEECC--------CCT
T ss_pred CCCcEEEEEEcCC-CCCHHHHHHHHHCCCCCeEEEEEEcCCChhHHHHHHHc---------CCCEEEeC--------CCc
Q ss_pred CCccccccchhhhhhHHHHHHHHHhhHHHHHHHHhhCCCCEEEecCCCc-cHHHHHHHcCCCeEEEecc
Q 010093 110 CENLDAITNEVNKGLIVKFFGATMKLQEPLEQLLQEHKPDCLVADTFFP-WATDAAAKFGIPRLVFHGT 177 (518)
Q Consensus 110 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~~pDlVI~D~~~~-~~~~iA~~lgiP~v~~~~~ 177 (518)
... ....+.+.+.+++.++|+||.-.++. ....+-..+.-.++-++++
T Consensus 149 ~~r--------------------~~~~~~~~~~l~~~~~Dlivlagy~~il~~~~l~~~~~~~iNiHpS 197 (288)
T 3obi_A 149 DTR--------------------RQQEAAITALIAQTHTDLVVLARYMQILSDEMSARLAGRCINIHHS 197 (288)
T ss_dssp TTH--------------------HHHHHHHHHHHHHHTCCEEEESSCCSCCCHHHHHHTTTSEEEEEEE
T ss_pred ccH--------------------HHHHHHHHHHHHhcCCCEEEhhhhhhhCCHHHHhhhcCCeEEeCcc
No 314
>3n53_A Response regulator receiver modulated diguanylate; diguanylate cyclase, protein structure I II(PSI II), NYSGXRC, structural genomics; 2.20A {Pelobacter carbinolicus} SCOP: c.23.1.0
Probab=24.22 E-value=71 Score=24.88 Aligned_cols=38 Identities=16% Similarity=0.314 Sum_probs=22.0
Q ss_pred HHHHhhCCCCEEEecCCCc--cHHHHHHH-------cCCCeEEEecc
Q 010093 140 EQLLQEHKPDCLVADTFFP--WATDAAAK-------FGIPRLVFHGT 177 (518)
Q Consensus 140 ~~ll~~~~pDlVI~D~~~~--~~~~iA~~-------lgiP~v~~~~~ 177 (518)
.+.++..+||+||+|.... .+..+.+. -++|++.++..
T Consensus 39 ~~~~~~~~~dlvi~D~~l~~~~g~~~~~~l~~~~~~~~~~ii~~s~~ 85 (140)
T 3n53_A 39 LEQIDHHHPDLVILDMDIIGENSPNLCLKLKRSKGLKNVPLILLFSS 85 (140)
T ss_dssp HHHHHHHCCSEEEEETTC------CHHHHHHTSTTCTTCCEEEEECC
T ss_pred HHHHhcCCCCEEEEeCCCCCCcHHHHHHHHHcCcccCCCCEEEEecC
Confidence 3445556899999997554 23333322 46788877654
No 315
>3lrx_A Putative hydrogenase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.60A {Pyrococcus furiosus}
Probab=24.16 E-value=61 Score=26.68 Aligned_cols=36 Identities=11% Similarity=0.205 Sum_probs=29.2
Q ss_pred cEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCCCC
Q 010093 36 LHVFFFPFMAHGHMIPIVDMAKLFATRGVKASVITTPAN 74 (518)
Q Consensus 36 ~kIl~~~~~~~GH~~p~l~LA~~L~~rGH~Vt~~~~~~~ 74 (518)
.+++++..+. | +.|++++++.|.++|.+|+++ ....
T Consensus 24 ~~~llIaGG~-G-ItPl~sm~~~l~~~~~~v~l~-g~r~ 59 (158)
T 3lrx_A 24 GKILAIGAYT-G-IVEVYPIAKAWQEIGNDVTTL-HVTF 59 (158)
T ss_dssp SEEEEEEETT-H-HHHHHHHHHHHHHHTCEEEEE-EECB
T ss_pred CeEEEEEccC-c-HHHHHHHHHHHHhcCCcEEEE-EeCC
Confidence 4788887765 3 999999999999999999998 5443
No 316
>3rqi_A Response regulator protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PHD CIT; 1.70A {Burkholderia pseudomallei}
Probab=24.14 E-value=69 Score=26.70 Aligned_cols=39 Identities=15% Similarity=0.070 Sum_probs=25.6
Q ss_pred HHHHhhCCCCEEEecCCCc--cHHHHHHH-----cCCCeEEEecch
Q 010093 140 EQLLQEHKPDCLVADTFFP--WATDAAAK-----FGIPRLVFHGTS 178 (518)
Q Consensus 140 ~~ll~~~~pDlVI~D~~~~--~~~~iA~~-----lgiP~v~~~~~~ 178 (518)
.+.++..+||+||+|..++ .+..+++. -++|++.++...
T Consensus 44 l~~~~~~~~dlvl~D~~lp~~~g~~~~~~l~~~~~~~~ii~lt~~~ 89 (184)
T 3rqi_A 44 LKLAGAEKFEFITVXLHLGNDSGLSLIAPLCDLQPDARILVLTGYA 89 (184)
T ss_dssp HHHHTTSCCSEEEECSEETTEESHHHHHHHHHHCTTCEEEEEESSC
T ss_pred HHHHhhCCCCEEEEeccCCCccHHHHHHHHHhcCCCCCEEEEeCCC
Confidence 3445667899999997655 34444443 367888776643
No 317
>3qsg_A NAD-binding phosphogluconate dehydrogenase-like P; structural genomics, PSI-biology, midwest center for structu genomics; 1.90A {Alicyclobacillus acidocaldarius subsp}
Probab=24.13 E-value=43 Score=31.29 Aligned_cols=33 Identities=12% Similarity=0.166 Sum_probs=25.6
Q ss_pred CCcEEEEEcCCCccChHHHHHHHHHHHhCCC-eEEEEeC
Q 010093 34 PQLHVFFFPFMAHGHMIPIVDMAKLFATRGV-KASVITT 71 (518)
Q Consensus 34 ~~~kIl~~~~~~~GH~~p~l~LA~~L~~rGH-~Vt~~~~ 71 (518)
.||||.|+=.+..| ..+|+.|+++|| +|+++..
T Consensus 23 ~~~~I~iIG~G~mG-----~~~A~~L~~~G~~~V~~~dr 56 (312)
T 3qsg_A 23 NAMKLGFIGFGEAA-----SAIASGLRQAGAIDMAAYDA 56 (312)
T ss_dssp --CEEEEECCSHHH-----HHHHHHHHHHSCCEEEEECS
T ss_pred CCCEEEEECccHHH-----HHHHHHHHHCCCCeEEEEcC
Confidence 57899999666555 588999999999 9988765
No 318
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=24.02 E-value=31 Score=30.16 Aligned_cols=32 Identities=13% Similarity=0.129 Sum_probs=23.8
Q ss_pred cEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCC
Q 010093 36 LHVFFFPFMAHGHMIPIVDMAKLFATRGVKASVITTP 72 (518)
Q Consensus 36 ~kIl~~~~~~~GH~~p~l~LA~~L~~rGH~Vt~~~~~ 72 (518)
|||+++=. | .--..+|+.|.++||+|+++...
T Consensus 1 M~iiIiG~---G--~~G~~la~~L~~~g~~v~vid~~ 32 (218)
T 3l4b_C 1 MKVIIIGG---E--TTAYYLARSMLSRKYGVVIINKD 32 (218)
T ss_dssp CCEEEECC---H--HHHHHHHHHHHHTTCCEEEEESC
T ss_pred CEEEEECC---C--HHHHHHHHHHHhCCCeEEEEECC
Confidence 46666643 3 23568999999999999999764
No 319
>1t5b_A Acyl carrier protein phosphodiesterase; structural genomics, FMN, alpha/beta/alpha sandwich, PSI, protein structure initiative; HET: FMN; 1.40A {Salmonella typhimurium} SCOP: c.23.5.3 PDB: 1tik_A 2z98_A* 2d5i_A* 1v4b_A* 2z9b_A* 2z9c_A* 2z9d_A*
Probab=24.01 E-value=73 Score=27.02 Aligned_cols=38 Identities=8% Similarity=0.066 Sum_probs=24.1
Q ss_pred CcEEEEEc-CCC--ccChHHHHH-HHHHHHhCC--CeEEEEeCC
Q 010093 35 QLHVFFFP-FMA--HGHMIPIVD-MAKLFATRG--VKASVITTP 72 (518)
Q Consensus 35 ~~kIl~~~-~~~--~GH~~p~l~-LA~~L~~rG--H~Vt~~~~~ 72 (518)
||||+++. .+. .|+..-+.. +++.|.++| |+|.++--.
T Consensus 1 Mmkilii~~S~~~~~s~t~~la~~~~~~l~~~g~~~~v~~~dl~ 44 (201)
T 1t5b_A 1 MSKVLVLKSSILAGYSQSGQLTDYFIEQWREKHVADEITVRDLA 44 (201)
T ss_dssp CCEEEEEECCSSGGGCHHHHHHHHHHHHHHHHCTTCEEEEEETT
T ss_pred CCeEEEEEeCCCCCCChHHHHHHHHHHHHHHhCCCCeEEEEecc
Confidence 56887554 444 266665553 566677766 888877653
No 320
>2ark_A Flavodoxin; FMN, structural genomics, PSI, structure initiative, midwest center for structural genomic electron transport; 2.40A {Aquifex aeolicus} SCOP: c.23.5.8
Probab=23.97 E-value=82 Score=26.59 Aligned_cols=40 Identities=10% Similarity=0.021 Sum_probs=28.4
Q ss_pred CCcEEEEEcCCCccChHHHH-HHHHHHHh-CCCeEEEEeCCC
Q 010093 34 PQLHVFFFPFMAHGHMIPIV-DMAKLFAT-RGVKASVITTPA 73 (518)
Q Consensus 34 ~~~kIl~~~~~~~GH~~p~l-~LA~~L~~-rGH~Vt~~~~~~ 73 (518)
.|+||+++-....|+..-+. .|++.|.+ .|++|.++....
T Consensus 3 ~M~kiliiy~S~~GnT~~~a~~i~~~l~~~~g~~v~~~~l~~ 44 (188)
T 2ark_A 3 AMGKVLVIYDTRTGNTKKMAELVAEGARSLEGTEVRLKHVDE 44 (188)
T ss_dssp CCEEEEEEECCSSSHHHHHHHHHHHHHHTSTTEEEEEEETTT
T ss_pred CCCEEEEEEECCCcHHHHHHHHHHHHHhhcCCCeEEEEEhhh
Confidence 46788877666677766544 45677777 899999887654
No 321
>1u94_A RECA protein, recombinase A; homologous recombination, ATPase, DNA repair, DNA binding protein; 1.90A {Escherichia coli} SCOP: c.37.1.11 d.48.1.1 PDB: 1u98_A 1u99_A 1xms_A* 1xmv_A* 2rec_A 2reb_A 1n03_A* 1rea_A 1aa3_A
Probab=23.93 E-value=2.8e+02 Score=26.26 Aligned_cols=40 Identities=10% Similarity=0.064 Sum_probs=34.0
Q ss_pred EEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCCCCcc
Q 010093 37 HVFFFPFMAHGHMIPIVDMAKLFATRGVKASVITTPANAP 76 (518)
Q Consensus 37 kIl~~~~~~~GH~~p~l~LA~~L~~rGH~Vt~~~~~~~~~ 76 (518)
-+++.--|+.|-..-.+.+|..+..+|..|.|+..+...+
T Consensus 65 ii~I~G~pGsGKTtLal~la~~~~~~g~~vlyid~E~s~~ 104 (356)
T 1u94_A 65 IVEIYGPESSGKTTLTLQVIAAAQREGKTCAFIDAEHALD 104 (356)
T ss_dssp EEEEECSTTSSHHHHHHHHHHHHHHTTCCEEEEESSCCCC
T ss_pred EEEEECCCCCCHHHHHHHHHHHHHHCCCeEEEEeCCCCcc
Confidence 4667777899999999999999999999999999976433
No 322
>1vhq_A Enhancing lycopene biosynthesis protein 2; structural genomics, unknown function; 1.65A {Escherichia coli} SCOP: c.23.16.2 PDB: 1oy1_A
Probab=23.87 E-value=1.3e+02 Score=26.33 Aligned_cols=38 Identities=8% Similarity=-0.047 Sum_probs=28.8
Q ss_pred CcEEEEEcC-----CCccChHHHHHHHHHHHhCCCeEEEEeCCC
Q 010093 35 QLHVFFFPF-----MAHGHMIPIVDMAKLFATRGVKASVITTPA 73 (518)
Q Consensus 35 ~~kIl~~~~-----~~~GH~~p~l~LA~~L~~rGH~Vt~~~~~~ 73 (518)
|+||+|+.. ++. ...=+....+.|.+.|++|+++++..
T Consensus 6 m~kv~ill~~~~~~~g~-~~~E~~~p~~~l~~ag~~v~~~s~~g 48 (232)
T 1vhq_A 6 MKKIGVILSGCGVYDGS-EIHEAVLTLLAISRSGAQAVCFAPDK 48 (232)
T ss_dssp CCEEEEECCSBSTTTSB-CHHHHHHHHHHHHHTTCEEEEEECSS
T ss_pred CCeEEEEEccCCCCCCe-eHHHHHHHHHHHHHCCCEEEEEecCC
Confidence 468998877 543 44556667788999999999999854
No 323
>2pn1_A Carbamoylphosphate synthase large subunit; ZP_00538348.1, ATP-grAsp domain, carbamoylphosphate synthase subunit (split gene in MJ); 2.00A {Exiguobacterium sibiricum}
Probab=23.83 E-value=90 Score=28.99 Aligned_cols=33 Identities=9% Similarity=0.145 Sum_probs=24.7
Q ss_pred CCcEEEEEcCCCccChHHHHHHHHHHHhC-C-CeEEEEeCC
Q 010093 34 PQLHVFFFPFMAHGHMIPIVDMAKLFATR-G-VKASVITTP 72 (518)
Q Consensus 34 ~~~kIl~~~~~~~GH~~p~l~LA~~L~~r-G-H~Vt~~~~~ 72 (518)
+++||+++..+.. .++++.|++. | ++|..+...
T Consensus 3 ~~~~Ili~g~g~~------~~l~~~l~~~~~~~~v~~~d~~ 37 (331)
T 2pn1_A 3 QKPHLLITSAGRR------AKLVEYFVKEFKTGRVSTADCS 37 (331)
T ss_dssp TCCEEEEESCTTC------HHHHHHHHHHCCSSEEEEEESC
T ss_pred ccceEEEecCCch------HHHHHHHHHhcCCCEEEEEeCC
Confidence 4579999866554 4789999886 7 888777654
No 324
>2bru_C NAD(P) transhydrogenase subunit beta; paramagnetic transhydrogenase, inner membrane, membrane, oxidoreductase, transmembrane; HET: NAD NAP; NMR {Escherichia coli}
Probab=23.78 E-value=60 Score=27.17 Aligned_cols=38 Identities=16% Similarity=0.308 Sum_probs=29.9
Q ss_pred cEEEEEcCCC--cc-ChHHHHHHHHHHHhCCCeEEEEeCCC
Q 010093 36 LHVFFFPFMA--HG-HMIPIVDMAKLFATRGVKASVITTPA 73 (518)
Q Consensus 36 ~kIl~~~~~~--~G-H~~p~l~LA~~L~~rGH~Vt~~~~~~ 73 (518)
-+|+|+|.=+ .. --.+...|++.|.++|.+|.|+.+|-
T Consensus 31 ~~ViIVPGYGmAVAqAQ~~v~el~~~L~~~G~~V~faIHPV 71 (186)
T 2bru_C 31 HSVIITPGYGMAVAQAQYPVAEITEKLRARGINVRFGIHPV 71 (186)
T ss_dssp SEEEEECSBHHHHTTTHHHHHHHHHHHHHHCCEEEEEECSS
T ss_pred CeEEEECChHHHHHHHHHHHHHHHHHHHHCCCeEEEEeccc
Confidence 3788888432 11 34688999999999999999999974
No 325
>4grd_A N5-CAIR mutase, phosphoribosylaminoimidazole carboxylase catalyti; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures; 1.85A {Burkholderia cenocepacia}
Probab=23.76 E-value=3.2e+02 Score=22.84 Aligned_cols=146 Identities=14% Similarity=0.136 Sum_probs=77.4
Q ss_pred CCcEEEEecCCcccCCHHHHHHHHHHHHhCCCcEEEEEcC-CCCCCCCCCCCCCChhHHHHHhcCCCcEeecCccHHHhh
Q 010093 313 PYSVVYVCFGSLANFTSAQLMEIATGLEASGRNFIWVVSK-NKNDGGEGGNEDWLPEGFEKRMEGKGLIIRGWAPQVLIL 391 (518)
Q Consensus 313 ~~~vIyvslGS~~~~~~~~~~~l~~al~~~~~~~i~~~~~-~~~~~~~~~~~~~lp~~~~~~~~~~nv~~~~~~pq~~lL 391 (518)
+.|.|-|=.||.+ +-...++....++.++..+-..+-+ +. .|+.+.... -. .
T Consensus 11 ~~P~V~IimGS~S--D~~v~~~a~~~l~~~gi~~ev~V~saHR-----------~p~~l~~~~-----------~~---a 63 (173)
T 4grd_A 11 SAPLVGVLMGSSS--DWDVMKHAVAILQEFGVPYEAKVVSAHR-----------MPDEMFDYA-----------EK---A 63 (173)
T ss_dssp SSCSEEEEESSGG--GHHHHHHHHHHHHHTTCCEEEEECCTTT-----------SHHHHHHHH-----------HH---H
T ss_pred CCCeEEEEeCcHh--HHHHHHHHHHHHHHcCCCEEEEEEcccc-----------CHHHHHHHH-----------HH---H
Confidence 4566778888866 5666777888888888875444433 33 555432211 00 0
Q ss_pred ccCCCcccccccCc----hhHHHHHHhCCceecCCcccc---cchhHHHHHHhh--hcceeeccccccccccCccChHHH
Q 010093 392 DHEAVGGFVTHCGW----NSTLEAVAAGVPLVTWPVAAE---QFYNEKMVNEIL--KIGVGVGIQKWCRIVGDFVKRETI 462 (518)
Q Consensus 392 ~~~~~~~~ItHgG~----~s~~eal~~GvP~l~~P~~~D---Q~~na~~v~e~~--G~G~~l~~~~~~~~~~~~~~~~~l 462 (518)
....++.+|.=.|. .++.- -..-+|+|++|.-.. ..+--.-++ +. |+.+..-.-. .++.+++.-+
T Consensus 64 ~~~g~~ViIa~AG~aahLpgvvA-~~t~~PVIgVPv~~~~l~G~dsLlSiv-qMP~Gvpvatv~i~----~~~a~NAall 137 (173)
T 4grd_A 64 RERGLRAIIAGAGGAAHLPGMLA-AKTTVPVLGVPVASKYLKGVDSLHSIV-QMPKGVPVATFAIG----EAGAANAALF 137 (173)
T ss_dssp TTTTCSEEEEEEESSCCHHHHHH-HHCCSCEEEEEECCTTTTTHHHHHHHH-CCCTTSCCEECCSS----HHHHHHHHHH
T ss_pred HhcCCeEEEEeccccccchhhhe-ecCCCCEEEEEcCCCCCCchhHHHHHH-hCCCCCCceEEecC----CcchHHHHHH
Confidence 00123335554443 23433 356789999997433 222222222 22 4444321110 0012233333
Q ss_pred HHHHHHHhcCChHHHHHHHHHHHHHHHHHHHhc
Q 010093 463 EKAVNEIMVGDRAEEMRSRAKALGKMAKRAVEN 495 (518)
Q Consensus 463 ~~av~~ll~~~~~~~~~~~a~~l~~~~~~~~~~ 495 (518)
. .++|. -.|+.++++.++++++.++.+.+
T Consensus 138 A---~~ILa-~~d~~l~~kl~~~r~~~~~~v~~ 166 (173)
T 4grd_A 138 A---VSILS-GNSVDYANRLAAFRVRQNEAAHA 166 (173)
T ss_dssp H---HHHHT-TSCHHHHHHHHHHHHHHHHHHHH
T ss_pred H---HHHHc-CCCHHHHHHHHHHHHHHHHHHHc
Confidence 3 35554 22669999999999998876655
No 326
>1l5x_A SurviVal protein E; structural genomics, putative acid phosphatase, mixed alpha/ protein, N-terminal rossmann-fold like; 2.00A {Pyrobaculum aerophilum} SCOP: c.106.1.1
Probab=23.72 E-value=85 Score=28.82 Aligned_cols=42 Identities=7% Similarity=0.053 Sum_probs=31.6
Q ss_pred cEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCCCCccchh
Q 010093 36 LHVFFFPFMAHGHMIPIVDMAKLFATRGVKASVITTPANAPYVS 79 (518)
Q Consensus 36 ~kIl~~~~~~~GH~~p~l~LA~~L~~rGH~Vt~~~~~~~~~~~~ 79 (518)
||||+..--+. +---+..|+++|.+.| +|+++.|...+.-+.
T Consensus 1 M~ILlTNDDGi-~ApGi~aL~~aL~~~g-~V~VVAP~~~qSg~g 42 (280)
T 1l5x_A 1 MKILVTNDDGV-HSPGLRLLYQFALSLG-DVDVVAPESPKSATG 42 (280)
T ss_dssp CEEEEECSSCT-TCHHHHHHHHHHGGGS-EEEEEEESSCTTTSC
T ss_pred CeEEEEcCCCC-CcHhHHHHHHHHHhCC-CEEEEecCCCCcCCc
Confidence 57887775554 3445888999999988 999999987665443
No 327
>2v4n_A Multifunctional protein SUR E; hydrolase, surviVal protein, stationary phase, phosph mononucleotidase, divalent metal ION; 1.7A {Salmonella typhimurium} PDB: 2v4o_A
Probab=23.63 E-value=91 Score=28.15 Aligned_cols=42 Identities=17% Similarity=0.127 Sum_probs=32.2
Q ss_pred cEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCCCCccchh
Q 010093 36 LHVFFFPFMAHGHMIPIVDMAKLFATRGVKASVITTPANAPYVS 79 (518)
Q Consensus 36 ~kIl~~~~~~~GH~~p~l~LA~~L~~rGH~Vt~~~~~~~~~~~~ 79 (518)
||||+..--+. |---+..|+++|.+.| +|+++.|...++-+.
T Consensus 2 M~ILlTNDDGi-~apGi~aL~~~L~~~g-~V~VVAP~~~~Sg~g 43 (254)
T 2v4n_A 2 MRILLSNDDGV-HAPGIQTLAKALREFA-DVQVVAPDRNRSGAS 43 (254)
T ss_dssp CEEEEECSSCT-TCHHHHHHHHHHTTTS-EEEEEEESSCCTTCT
T ss_pred CeEEEEcCCCC-CCHHHHHHHHHHHhCC-cEEEEeeCCCCcCcc
Confidence 68888886655 4455888999998876 999999987665443
No 328
>3lp6_A Phosphoribosylaminoimidazole carboxylase catalyti; alpha and beta protein, structural genomics, PSI-2, protein initiative; 1.70A {Mycobacterium tuberculosis} SCOP: c.23.8.0
Probab=23.56 E-value=3.3e+02 Score=22.84 Aligned_cols=142 Identities=15% Similarity=0.116 Sum_probs=74.6
Q ss_pred cEEEEecCCcccCCHHHHHHHHHHHHhCCCcEEEEEcC-CCCCCCCCCCCCCChhHHHHHhcCCCcEeecCccHHHhhcc
Q 010093 315 SVVYVCFGSLANFTSAQLMEIATGLEASGRNFIWVVSK-NKNDGGEGGNEDWLPEGFEKRMEGKGLIIRGWAPQVLILDH 393 (518)
Q Consensus 315 ~vIyvslGS~~~~~~~~~~~l~~al~~~~~~~i~~~~~-~~~~~~~~~~~~~lp~~~~~~~~~~nv~~~~~~pq~~lL~~ 393 (518)
+.|-|-.||.+ +-...++....++.++..+=..+-+ .. .|+.+... +-.- ..
T Consensus 8 ~~V~IimgS~S--D~~v~~~a~~~L~~~gi~~ev~V~SaHR-----------~p~~~~~~-----------~~~a---~~ 60 (174)
T 3lp6_A 8 PRVGVIMGSDS--DWPVMADAAAALAEFDIPAEVRVVSAHR-----------TPEAMFSY-----------ARGA---AA 60 (174)
T ss_dssp CSEEEEESCGG--GHHHHHHHHHHHHHTTCCEEEEECCTTT-----------CHHHHHHH-----------HHHH---HH
T ss_pred CeEEEEECcHH--hHHHHHHHHHHHHHcCCCEEEEEECCCC-----------CHHHHHHH-----------HHHH---Hh
Confidence 34556667755 5666777888888888875444433 22 55533221 0000 00
Q ss_pred CCCcccccccCc----hhHHHHHHhCCceecCCcccccc-hhH--HHHHH-hhhcceee-ccccccccccCccChHHHHH
Q 010093 394 EAVGGFVTHCGW----NSTLEAVAAGVPLVTWPVAAEQF-YNE--KMVNE-ILKIGVGV-GIQKWCRIVGDFVKRETIEK 464 (518)
Q Consensus 394 ~~~~~~ItHgG~----~s~~eal~~GvP~l~~P~~~DQ~-~na--~~v~e-~~G~G~~l-~~~~~~~~~~~~~~~~~l~~ 464 (518)
..++++|.=+|. .++..+ ..-+|+|++|...-.. ... .-+++ =.|+.+.. ... +.+++.-+..
T Consensus 61 ~g~~ViIa~AG~aa~LpgvvA~-~t~~PVIgVP~~~~~l~G~daLlS~vqmp~GvpVatV~I~-------~~~nAa~lAa 132 (174)
T 3lp6_A 61 RGLEVIIAGAGGAAHLPGMVAA-ATPLPVIGVPVPLGRLDGLDSLLSIVQMPAGVPVATVSIG-------GAGNAGLLAV 132 (174)
T ss_dssp HTCCEEEEEEESSCCHHHHHHH-HCSSCEEEEEECCSSGGGHHHHHHHHCCCTTCCCEECCTT-------CHHHHHHHHH
T ss_pred CCCCEEEEecCchhhhHHHHHh-ccCCCEEEeeCCCCCCCCHHHHHHHhhCCCCCeeEEEEcC-------cchHHHHHHH
Confidence 113346666554 244433 4668999999753211 111 12211 12332322 221 2345555544
Q ss_pred HHHHHhcCChHHHHHHHHHHHHHHHHHHHhc
Q 010093 465 AVNEIMVGDRAEEMRSRAKALGKMAKRAVEN 495 (518)
Q Consensus 465 av~~ll~~~~~~~~~~~a~~l~~~~~~~~~~ 495 (518)
.|-.+ + |+.++++.+..+++.++.+.+
T Consensus 133 ~Il~~--~--d~~l~~kl~~~r~~~~~~v~~ 159 (174)
T 3lp6_A 133 RMLGA--A--NPQLRARIVAFQDRLADVVAA 159 (174)
T ss_dssp HHHHT--T--CHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHhC--C--CHHHHHHHHHHHHHHHHHHHH
Confidence 44332 2 669999999999998866544
No 329
>2pju_A Propionate catabolism operon regulatory protein; structural genomics, PRPR, transcriptional regulation, PSI- 2, protein structure initiative; 2.10A {Escherichia coli} SCOP: c.92.3.1
Probab=23.52 E-value=91 Score=27.54 Aligned_cols=30 Identities=10% Similarity=0.155 Sum_probs=24.2
Q ss_pred CCcccccccCchhHHHHHHhCCceecCCccc
Q 010093 395 AVGGFVTHCGWNSTLEAVAAGVPLVTWPVAA 425 (518)
Q Consensus 395 ~~~~~ItHgG~~s~~eal~~GvP~l~~P~~~ 425 (518)
.++++|+.||........ ..+|+|-++..+
T Consensus 63 ~~dVIISRGgta~~Lr~~-~~iPVV~I~vs~ 92 (225)
T 2pju_A 63 RCDAIIAAGSNGAYLKSR-LSVPVILIKPSG 92 (225)
T ss_dssp CCSEEEEEHHHHHHHHTT-CSSCEEEECCCH
T ss_pred CCeEEEeCChHHHHHHhh-CCCCEEEecCCH
Confidence 466799999998888874 689999988644
No 330
>2qr3_A Two-component system response regulator; structural genomics, signal receiver, PSI-2, protein structu initiative; 1.80A {Bacteroides fragilis}
Probab=23.49 E-value=1e+02 Score=23.70 Aligned_cols=38 Identities=18% Similarity=0.302 Sum_probs=24.4
Q ss_pred HHHhhCCCCEEEecCCCc-------cHHHHHHH-----cCCCeEEEecch
Q 010093 141 QLLQEHKPDCLVADTFFP-------WATDAAAK-----FGIPRLVFHGTS 178 (518)
Q Consensus 141 ~ll~~~~pDlVI~D~~~~-------~~~~iA~~-----lgiP~v~~~~~~ 178 (518)
+.++..+||+||+|.... .+..+.+. -++|++.++...
T Consensus 41 ~~l~~~~~dlvi~d~~~~~~~~~~~~g~~~~~~l~~~~~~~~ii~ls~~~ 90 (140)
T 2qr3_A 41 TVLREENPEVVLLDMNFTSGINNGNEGLFWLHEIKRQYRDLPVVLFTAYA 90 (140)
T ss_dssp HHHHHSCEEEEEEETTTTC-----CCHHHHHHHHHHHCTTCCEEEEEEGG
T ss_pred HHHHcCCCCEEEEeCCcCCCCCCCccHHHHHHHHHhhCcCCCEEEEECCC
Confidence 345567899999997543 34433333 268988887654
No 331
>2a33_A Hypothetical protein; structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG, AT2G37210; 1.95A {Arabidopsis thaliana} SCOP: c.129.1.1 PDB: 2q4o_A
Probab=23.43 E-value=1.1e+02 Score=26.83 Aligned_cols=39 Identities=13% Similarity=0.098 Sum_probs=27.8
Q ss_pred CCcEEEEEcCCCccC----hHHHHHHHHHHHhCCCeEEEEeCC
Q 010093 34 PQLHVFFFPFMAHGH----MIPIVDMAKLFATRGVKASVITTP 72 (518)
Q Consensus 34 ~~~kIl~~~~~~~GH----~~p~l~LA~~L~~rGH~Vt~~~~~ 72 (518)
+|.+|.+++....+. ..-...|++.|+++|+.|+.-...
T Consensus 12 ~m~~IaV~cGS~~~~~~~y~~~A~~lg~~LA~~G~~vVsGGg~ 54 (215)
T 2a33_A 12 KFRRICVFCGSSQGKKSSYQDAAVDLGNELVSRNIDLVYGGGS 54 (215)
T ss_dssp SCSEEEEECCSSCCSSHHHHHHHHHHHHHHHHTTCEEEECCCS
T ss_pred CCCeEEEEECCCCCCchHHHHHHHHHHHHHHHCCCEEEECCCh
Confidence 455799997665543 335678899999999988766553
No 332
>3cfy_A Putative LUXO repressor protein; structural genomics, unknown function, uncharacterized protein, signal receiver domain; 2.50A {Vibrio parahaemolyticus rimd 2210633}
Probab=23.43 E-value=1e+02 Score=23.97 Aligned_cols=36 Identities=14% Similarity=0.269 Sum_probs=23.1
Q ss_pred HHhhCCCCEEEecCCCc--cHHHHHHHc-----CCCeEEEecc
Q 010093 142 LLQEHKPDCLVADTFFP--WATDAAAKF-----GIPRLVFHGT 177 (518)
Q Consensus 142 ll~~~~pDlVI~D~~~~--~~~~iA~~l-----giP~v~~~~~ 177 (518)
.++..+||+||.|.... .+..+.+.+ .+|++.++..
T Consensus 43 ~l~~~~~dlvllD~~l~~~~g~~l~~~l~~~~~~~~ii~ls~~ 85 (137)
T 3cfy_A 43 FIERSKPQLIILDLKLPDMSGEDVLDWINQNDIPTSVIIATAH 85 (137)
T ss_dssp HHHHHCCSEEEECSBCSSSBHHHHHHHHHHTTCCCEEEEEESS
T ss_pred HHHhcCCCEEEEecCCCCCCHHHHHHHHHhcCCCCCEEEEEec
Confidence 34456899999997654 355444443 5677777654
No 333
>2j48_A Two-component sensor kinase; pseudo-receiver, circadian clock, transferase, response regulator, histidine protein kinase; NMR {Synechococcus elongatus}
Probab=23.37 E-value=1.1e+02 Score=22.37 Aligned_cols=38 Identities=16% Similarity=0.044 Sum_probs=23.6
Q ss_pred HHHHhhCCCCEEEecCCCc--cHHHHHHH-------cCCCeEEEecc
Q 010093 140 EQLLQEHKPDCLVADTFFP--WATDAAAK-------FGIPRLVFHGT 177 (518)
Q Consensus 140 ~~ll~~~~pDlVI~D~~~~--~~~~iA~~-------lgiP~v~~~~~ 177 (518)
.+.+...+||+||+|.... .+..+.+. -++|++.++..
T Consensus 38 ~~~l~~~~~dlii~d~~~~~~~~~~~~~~l~~~~~~~~~~ii~~~~~ 84 (119)
T 2j48_A 38 LDQLDLLQPIVILMAWPPPDQSCLLLLQHLREHQADPHPPLVLFLGE 84 (119)
T ss_dssp HHHHHHHCCSEEEEECSTTCCTHHHHHHHHHHTCCCSSCCCEEEESS
T ss_pred HHHHHhcCCCEEEEecCCCCCCHHHHHHHHHhccccCCCCEEEEeCC
Confidence 3444556899999997554 33333332 36788877654
No 334
>3hwr_A 2-dehydropantoate 2-reductase; YP_299159.1, PANE/APBA family ketopantoate reductase, struct genomics, joint center for structural genomics; HET: NDP BCN; 2.15A {Ralstonia eutropha}
Probab=23.37 E-value=57 Score=30.48 Aligned_cols=31 Identities=19% Similarity=0.198 Sum_probs=24.8
Q ss_pred CCcEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEE
Q 010093 34 PQLHVFFFPFMAHGHMIPIVDMAKLFATRGVKASVI 69 (518)
Q Consensus 34 ~~~kIl~~~~~~~GH~~p~l~LA~~L~~rGH~Vt~~ 69 (518)
.++||+|+=.+..| ..+|..|++.||+|+++
T Consensus 18 ~~~kI~IiGaGa~G-----~~~a~~L~~~G~~V~l~ 48 (318)
T 3hwr_A 18 QGMKVAIMGAGAVG-----CYYGGMLARAGHEVILI 48 (318)
T ss_dssp --CEEEEESCSHHH-----HHHHHHHHHTTCEEEEE
T ss_pred cCCcEEEECcCHHH-----HHHHHHHHHCCCeEEEE
Confidence 35799999776665 56789999999999999
No 335
>3r6w_A FMN-dependent NADH-azoreductase 1; nitrofurazone, P. aeruginosa, nitroreductase, flavodoxin, oxidoreductase; HET: FMN NFZ; 2.08A {Pseudomonas aeruginosa} PDB: 3lt5_A* 2v9c_A* 3keg_A*
Probab=23.27 E-value=75 Score=27.47 Aligned_cols=37 Identities=0% Similarity=-0.047 Sum_probs=22.2
Q ss_pred CcEEEEEcCCCc---cChHHHH-HHHHHHHhC--CCeEEEEeC
Q 010093 35 QLHVFFFPFMAH---GHMIPIV-DMAKLFATR--GVKASVITT 71 (518)
Q Consensus 35 ~~kIl~~~~~~~---GH~~p~l-~LA~~L~~r--GH~Vt~~~~ 71 (518)
||||+++....+ |+..-+. .+++.|.++ ||+|+++--
T Consensus 1 MmkiLii~gSpr~~~s~t~~l~~~~~~~~~~~~~g~~v~~~dL 43 (212)
T 3r6w_A 1 MSRILAVHASPRGERSQSRRLAEVFLAAYREAHPQARVARREV 43 (212)
T ss_dssp CCCEEEEECCSCSTTCHHHHHHHHHHHHHHHHCTTCCEEEEES
T ss_pred CCEEEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCCeEEEEEC
Confidence 578875554333 3444333 456666666 899987754
No 336
>3c97_A Signal transduction histidine kinase; structural genomics, signaling, PSI-2, protein structure initiative; 1.70A {Aspergillus oryzae RIB40}
Probab=23.27 E-value=1.5e+02 Score=22.94 Aligned_cols=26 Identities=23% Similarity=0.329 Sum_probs=17.2
Q ss_pred HHHhhCCCCEEEecCCCc--cHHHHHHH
Q 010093 141 QLLQEHKPDCLVADTFFP--WATDAAAK 166 (518)
Q Consensus 141 ~ll~~~~pDlVI~D~~~~--~~~~iA~~ 166 (518)
+.+...+||+||.|...+ .+..+.+.
T Consensus 48 ~~l~~~~~dlvllD~~lp~~~g~~~~~~ 75 (140)
T 3c97_A 48 QAYQNRQFDVIIMDIQMPVMDGLEAVSE 75 (140)
T ss_dssp HHHHHSCCSEEEECTTCCSSCHHHHHHH
T ss_pred HHHhcCCCCEEEEeCCCCCCcHHHHHHH
Confidence 344567899999997654 35555444
No 337
>3psh_A Protein HI_1472; substrate binding protein, periplasmic binding protein, MOLY binding protein, metal transport; 1.50A {Haemophilus influenzae} PDB: 3psa_A
Probab=23.24 E-value=76 Score=29.58 Aligned_cols=34 Identities=21% Similarity=0.323 Sum_probs=23.2
Q ss_pred HhhCCCCEEEecCCCc-cHHHHHHHcCCCeEEEec
Q 010093 143 LQEHKPDCLVADTFFP-WATDAAAKFGIPRLVFHG 176 (518)
Q Consensus 143 l~~~~pDlVI~D~~~~-~~~~iA~~lgiP~v~~~~ 176 (518)
+.+.+||+||...... ....--++.|||++.+..
T Consensus 80 i~~l~PDlIi~~~~~~~~~~~~L~~~Gipvv~~~~ 114 (326)
T 3psh_A 80 LLALKPDVVFVTNYAPSEMIKQISDVNIPVVAISL 114 (326)
T ss_dssp HHHTCCSEEEEETTCCHHHHHHHHTTTCCEEEECS
T ss_pred HHccCCCEEEEeCCCChHHHHHHHHcCCCEEEEec
Confidence 4457999999875443 233444677999998754
No 338
>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}
Probab=23.22 E-value=59 Score=31.10 Aligned_cols=33 Identities=15% Similarity=0.234 Sum_probs=25.5
Q ss_pred CCcEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeC
Q 010093 34 PQLHVFFFPFMAHGHMIPIVDMAKLFATRGVKASVITT 71 (518)
Q Consensus 34 ~~~kIl~~~~~~~GH~~p~l~LA~~L~~rGH~Vt~~~~ 71 (518)
++|||.|+=.+..| ..+|+.|+++||+|+++..
T Consensus 21 ~~mkIgiIGlG~mG-----~~~A~~L~~~G~~V~v~dr 53 (358)
T 4e21_A 21 QSMQIGMIGLGRMG-----ADMVRRLRKGGHECVVYDL 53 (358)
T ss_dssp -CCEEEEECCSHHH-----HHHHHHHHHTTCEEEEECS
T ss_pred cCCEEEEECchHHH-----HHHHHHHHhCCCEEEEEeC
Confidence 46899998655443 5789999999999998754
No 339
>2pju_A Propionate catabolism operon regulatory protein; structural genomics, PRPR, transcriptional regulation, PSI- 2, protein structure initiative; 2.10A {Escherichia coli} SCOP: c.92.3.1
Probab=23.20 E-value=75 Score=28.13 Aligned_cols=31 Identities=19% Similarity=0.317 Sum_probs=26.2
Q ss_pred HhhCCCCEEEecCCCccHHHHHHHcCCCeEEEec
Q 010093 143 LQEHKPDCLVADTFFPWATDAAAKFGIPRLVFHG 176 (518)
Q Consensus 143 l~~~~pDlVI~D~~~~~~~~iA~~lgiP~v~~~~ 176 (518)
++..++|+||.|. ....+|+++|+|.+.+.+
T Consensus 150 l~~~G~~vVVG~~---~~~~~A~~~Gl~~vlI~s 180 (225)
T 2pju_A 150 LKANGTEAVVGAG---LITDLAEEAGMTGIFIYS 180 (225)
T ss_dssp HHHTTCCEEEESH---HHHHHHHHTTSEEEESSC
T ss_pred HHHCCCCEEECCH---HHHHHHHHcCCcEEEECC
Confidence 4458999999983 468899999999999885
No 340
>1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A*
Probab=23.17 E-value=68 Score=30.13 Aligned_cols=34 Identities=6% Similarity=-0.069 Sum_probs=24.6
Q ss_pred CcEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCC
Q 010093 35 QLHVFFFPFMAHGHMIPIVDMAKLFATRGVKASVITTP 72 (518)
Q Consensus 35 ~~kIl~~~~~~~GH~~p~l~LA~~L~~rGH~Vt~~~~~ 72 (518)
|++|++. |+.|-+ -..|++.|+++||+|+.+.-.
T Consensus 27 ~~~vlVt--GatG~i--G~~l~~~L~~~g~~V~~~~r~ 60 (352)
T 1sb8_A 27 PKVWLIT--GVAGFI--GSNLLETLLKLDQKVVGLDNF 60 (352)
T ss_dssp CCEEEEE--TTTSHH--HHHHHHHHHHTTCEEEEEECC
T ss_pred CCeEEEE--CCCcHH--HHHHHHHHHHCCCEEEEEeCC
Confidence 4677665 333433 567899999999999998764
No 341
>3of5_A Dethiobiotin synthetase; structural genomics, center for structural genomics of infec diseases, csgid, ligase; 1.52A {Francisella tularensis subsp}
Probab=23.17 E-value=96 Score=27.32 Aligned_cols=37 Identities=8% Similarity=0.151 Sum_probs=29.0
Q ss_pred CCcEEEEEcC-CCccChHHHHHHHHHHHhCCCeEEEEe
Q 010093 34 PQLHVFFFPF-MAHGHMIPIVDMAKLFATRGVKASVIT 70 (518)
Q Consensus 34 ~~~kIl~~~~-~~~GH~~p~l~LA~~L~~rGH~Vt~~~ 70 (518)
+|..|++... ..-|-..-...|++.|+++|++|.++=
T Consensus 3 ~mk~i~Itgt~t~vGKT~vt~~L~~~l~~~G~~V~~~K 40 (228)
T 3of5_A 3 AMKKFFIIGTDTEVGKTYISTKLIEVCEHQNIKSLCLK 40 (228)
T ss_dssp TCEEEEEEESSSSSCHHHHHHHHHHHHHHTTCCEEEEC
T ss_pred CCcEEEEEeCCCCCCHHHHHHHHHHHHHHCCCeeEEec
Confidence 3444554444 488999999999999999999999863
No 342
>3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} SCOP: c.2.1.0 PDB: 3sj7_A*
Probab=23.13 E-value=2e+02 Score=25.15 Aligned_cols=34 Identities=12% Similarity=-0.076 Sum_probs=25.3
Q ss_pred cEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCC
Q 010093 36 LHVFFFPFMAHGHMIPIVDMAKLFATRGVKASVITTP 72 (518)
Q Consensus 36 ~kIl~~~~~~~GH~~p~l~LA~~L~~rGH~Vt~~~~~ 72 (518)
.|.+++..++. .--..+|+.|+++|++|.++...
T Consensus 4 ~k~~lVTGas~---gIG~~ia~~l~~~G~~V~~~~~~ 37 (246)
T 3osu_A 4 TKSALVTGASR---GIGRSIALQLAEEGYNVAVNYAG 37 (246)
T ss_dssp SCEEEETTCSS---HHHHHHHHHHHHTTCEEEEEESS
T ss_pred CCEEEEECCCC---hHHHHHHHHHHHCCCEEEEEeCC
Confidence 46677766553 24578999999999999887653
No 343
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=23.04 E-value=45 Score=26.64 Aligned_cols=32 Identities=13% Similarity=0.099 Sum_probs=25.3
Q ss_pred cEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCC
Q 010093 36 LHVFFFPFMAHGHMIPIVDMAKLFATRGVKASVITTP 72 (518)
Q Consensus 36 ~kIl~~~~~~~GH~~p~l~LA~~L~~rGH~Vt~~~~~ 72 (518)
.||+++=.+.. ...+|+.|.++||+|+++...
T Consensus 8 ~~viIiG~G~~-----G~~la~~L~~~g~~v~vid~~ 39 (140)
T 3fwz_A 8 NHALLVGYGRV-----GSLLGEKLLASDIPLVVIETS 39 (140)
T ss_dssp SCEEEECCSHH-----HHHHHHHHHHTTCCEEEEESC
T ss_pred CCEEEECcCHH-----HHHHHHHHHHCCCCEEEEECC
Confidence 47888865443 458899999999999999875
No 344
>2rdm_A Response regulator receiver protein; structural genomics, unknown function, PSI-2, protein struct initiative; HET: MSE; 1.76A {Sinorhizobium medicae}
Probab=22.99 E-value=1.4e+02 Score=22.54 Aligned_cols=37 Identities=22% Similarity=0.232 Sum_probs=23.2
Q ss_pred HHHhhC-CCCEEEecCCCc---cHHHHHHHc-----CCCeEEEecc
Q 010093 141 QLLQEH-KPDCLVADTFFP---WATDAAAKF-----GIPRLVFHGT 177 (518)
Q Consensus 141 ~ll~~~-~pDlVI~D~~~~---~~~~iA~~l-----giP~v~~~~~ 177 (518)
+.+... +||+||+|.... .+..+.+.+ ++|++.++..
T Consensus 43 ~~l~~~~~~dlvi~d~~l~~~~~g~~~~~~l~~~~~~~~ii~~s~~ 88 (132)
T 2rdm_A 43 EMLKSGAAIDGVVTDIRFCQPPDGWQVARVAREIDPNMPIVYISGH 88 (132)
T ss_dssp HHHHTTCCCCEEEEESCCSSSSCHHHHHHHHHHHCTTCCEEEEESS
T ss_pred HHHHcCCCCCEEEEeeeCCCCCCHHHHHHHHHhcCCCCCEEEEeCC
Confidence 344555 899999997543 244444332 6888887654
No 345
>1z82_A Glycerol-3-phosphate dehydrogenase; TM0378, structural genom joint center for structural genomics, JCSG, protein structu initiative, PSI; HET: MSE NDP G3H G3P; 2.00A {Thermotoga maritima}
Probab=22.97 E-value=61 Score=30.48 Aligned_cols=32 Identities=13% Similarity=0.237 Sum_probs=26.2
Q ss_pred cEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCC
Q 010093 36 LHVFFFPFMAHGHMIPIVDMAKLFATRGVKASVITTP 72 (518)
Q Consensus 36 ~kIl~~~~~~~GH~~p~l~LA~~L~~rGH~Vt~~~~~ 72 (518)
+||.|+=.+..| ..+|..|++.||+|+++...
T Consensus 15 ~kI~iIG~G~mG-----~ala~~L~~~G~~V~~~~r~ 46 (335)
T 1z82_A 15 MRFFVLGAGSWG-----TVFAQMLHENGEEVILWARR 46 (335)
T ss_dssp CEEEEECCSHHH-----HHHHHHHHHTTCEEEEECSS
T ss_pred CcEEEECcCHHH-----HHHHHHHHhCCCeEEEEeCC
Confidence 589998766655 57899999999999988653
No 346
>1d1q_A Tyrosine phosphatase (E.C.3.1.3.48); beta-alpha-beta, hydrolase; HET: 4NP; 1.70A {Saccharomyces cerevisiae} SCOP: c.44.1.1 PDB: 1d2a_A* 1d1p_A*
Probab=22.94 E-value=1.2e+02 Score=24.93 Aligned_cols=31 Identities=13% Similarity=0.042 Sum_probs=21.3
Q ss_pred CCCcEEEEEcCCCccChHHHHHHHHHHHh-CC
Q 010093 33 IPQLHVFFFPFMAHGHMIPIVDMAKLFAT-RG 63 (518)
Q Consensus 33 ~~~~kIl~~~~~~~GH~~p~l~LA~~L~~-rG 63 (518)
++++||||+|.+-..=--..-.|++.+.. +|
T Consensus 5 ~~~~~VLFVCtgN~cRSpmAEal~~~~~~~~g 36 (161)
T 1d1q_A 5 KPKISVAFIALGNFCRSPMAEAIFKHEVEKAN 36 (161)
T ss_dssp SCCEEEEEEESSSSSHHHHHHHHHHHHHHHTT
T ss_pred CCCCEEEEEcCCcHHHHHHHHHHHHHHHHHcC
Confidence 45689999999855544555667777764 45
No 347
>4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli}
Probab=22.82 E-value=1.7e+02 Score=26.22 Aligned_cols=34 Identities=18% Similarity=0.132 Sum_probs=25.7
Q ss_pred CcEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeC
Q 010093 35 QLHVFFFPFMAHGHMIPIVDMAKLFATRGVKASVITT 71 (518)
Q Consensus 35 ~~kIl~~~~~~~GH~~p~l~LA~~L~~rGH~Vt~~~~ 71 (518)
+.|++++..++.| --..+|++|+++|++|.+...
T Consensus 25 ~~k~vlITGas~g---IG~a~a~~l~~~G~~V~~~~~ 58 (272)
T 4e3z_A 25 DTPVVLVTGGSRG---IGAAVCRLAARQGWRVGVNYA 58 (272)
T ss_dssp CSCEEEETTTTSH---HHHHHHHHHHHTTCEEEEEES
T ss_pred CCCEEEEECCCch---HHHHHHHHHHHCCCEEEEEcC
Confidence 3567777766543 457899999999999987754
No 348
>3cmw_A Protein RECA, recombinase A; homologous recombination, recombination/DNA complex; HET: DNA ADP; 2.80A {Escherichia coli} PDB: 3cmt_A* 3cmx_A* 3cmv_A*
Probab=22.81 E-value=3.8e+02 Score=31.55 Aligned_cols=42 Identities=10% Similarity=0.061 Sum_probs=36.2
Q ss_pred EEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCCCCccch
Q 010093 37 HVFFFPFMAHGHMIPIVDMAKLFATRGVKASVITTPANAPYV 78 (518)
Q Consensus 37 kIl~~~~~~~GH~~p~l~LA~~L~~rGH~Vt~~~~~~~~~~~ 78 (518)
-+++.--|+.|-..-.+.+|...+.+|..|.|++.+...+.+
T Consensus 385 lilI~G~pGsGKTtLaLq~a~~~~~~G~~vlyis~E~s~~~~ 426 (1706)
T 3cmw_A 385 IVEIYGPESSGKTTLTLQVIAAAQREGKTCAFIDAEHALDPI 426 (1706)
T ss_dssp EEEEECSTTSSHHHHHHHHHHHHHHTTCCEEEECTTSCCCHH
T ss_pred EEEEEeCCCCCHHHHHHHHHHHHHHhCCCeEEEEccCchHHH
Confidence 466777889999999999999999999999999998765543
No 349
>2w36_A Endonuclease V; hypoxanthine, endonuclease, endonucleasev, hydrolase, inosine, DNA damage, DNA repair; HET: BRU; 2.10A {Thermotoga maritima} PDB: 2w35_A 3hd0_A
Probab=22.80 E-value=61 Score=28.66 Aligned_cols=39 Identities=18% Similarity=0.150 Sum_probs=24.9
Q ss_pred HHHHHhh--CCCCEEEecCCCcc---H----HHHHHHcCCCeEEEecc
Q 010093 139 LEQLLQE--HKPDCLVADTFFPW---A----TDAAAKFGIPRLVFHGT 177 (518)
Q Consensus 139 l~~ll~~--~~pDlVI~D~~~~~---~----~~iA~~lgiP~v~~~~~ 177 (518)
+.+.+++ .+||+|++|..... . ..+...+++|+|-+.-.
T Consensus 93 ~l~al~~L~~~PdlllvDG~Gi~HpR~~GlA~HlGv~l~~PtIGVAK~ 140 (225)
T 2w36_A 93 FLKAWEKLRTKPDVVVFDGQGLAHPRKLGIASHMGLFIEIPTIGVAKS 140 (225)
T ss_dssp HHHHHTTCCSCCSEEEEESCSSSSTTSCCHHHHHHHHHTSCEEEEESS
T ss_pred HHHHHHhcCCCCCEEEEeCeEEEcCCCCCchhhhhhhhCCCEEEEEec
Confidence 3344443 47999999976553 3 33455558999876543
No 350
>2b4a_A BH3024; flavodoxin-like fold, structural genomics, joint center for structural genomics, JCSG, protein structure initiative; 2.42A {Bacillus halodurans} SCOP: c.23.1.1
Probab=22.77 E-value=1e+02 Score=23.84 Aligned_cols=38 Identities=11% Similarity=-0.021 Sum_probs=26.0
Q ss_pred HHHHHHhh-CCCCEEEecCCCc--cHHHHHHHc-----CCCeEEEe
Q 010093 138 PLEQLLQE-HKPDCLVADTFFP--WATDAAAKF-----GIPRLVFH 175 (518)
Q Consensus 138 ~l~~ll~~-~~pDlVI~D~~~~--~~~~iA~~l-----giP~v~~~ 175 (518)
+..+.++. .+||+||.|.... .+..+.+.+ ++|++.++
T Consensus 50 ~al~~l~~~~~~dlvilD~~l~~~~g~~~~~~l~~~~~~~~ii~ls 95 (138)
T 2b4a_A 50 AFFQHRSQLSTCDLLIVSDQLVDLSIFSLLDIVKEQTKQPSVLILT 95 (138)
T ss_dssp HHHHTGGGGGSCSEEEEETTCTTSCHHHHHHHHTTSSSCCEEEEEE
T ss_pred HHHHHHHhCCCCCEEEEeCCCCCCCHHHHHHHHHhhCCCCCEEEEE
Confidence 44455666 7899999997655 455555554 57777765
No 351
>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}
Probab=22.70 E-value=47 Score=30.68 Aligned_cols=32 Identities=19% Similarity=0.149 Sum_probs=25.9
Q ss_pred CcEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeC
Q 010093 35 QLHVFFFPFMAHGHMIPIVDMAKLFATRGVKASVITT 71 (518)
Q Consensus 35 ~~kIl~~~~~~~GH~~p~l~LA~~L~~rGH~Vt~~~~ 71 (518)
++||.|+=.+..| ..+|+.|+++||+|+++..
T Consensus 15 ~~~I~vIG~G~mG-----~~~A~~l~~~G~~V~~~dr 46 (296)
T 3qha_A 15 QLKLGYIGLGNMG-----APMATRMTEWPGGVTVYDI 46 (296)
T ss_dssp CCCEEEECCSTTH-----HHHHHHHTTSTTCEEEECS
T ss_pred CCeEEEECcCHHH-----HHHHHHHHHCCCeEEEEeC
Confidence 4689999776666 4789999999999998854
No 352
>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A*
Probab=22.61 E-value=84 Score=27.44 Aligned_cols=34 Identities=15% Similarity=0.122 Sum_probs=24.8
Q ss_pred cEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCC
Q 010093 36 LHVFFFPFMAHGHMIPIVDMAKLFATRGVKASVITTP 72 (518)
Q Consensus 36 ~kIl~~~~~~~GH~~p~l~LA~~L~~rGH~Vt~~~~~ 72 (518)
+|++++..++.| --..+|+.|+++|++|.++...
T Consensus 2 ~k~vlITGas~g---IG~~ia~~l~~~G~~V~~~~r~ 35 (235)
T 3l77_A 2 MKVAVITGASRG---IGEAIARALARDGYALALGARS 35 (235)
T ss_dssp CCEEEEESCSSH---HHHHHHHHHHHTTCEEEEEESC
T ss_pred CCEEEEECCCcH---HHHHHHHHHHHCCCEEEEEeCC
Confidence 356666655532 4578999999999999887653
No 353
>4iin_A 3-ketoacyl-acyl carrier protein reductase (FABG); structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.40A {Helicobacter pylori} PDB: 4ijk_A
Probab=22.46 E-value=1e+02 Score=27.66 Aligned_cols=33 Identities=18% Similarity=0.181 Sum_probs=25.2
Q ss_pred EEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCC
Q 010093 37 HVFFFPFMAHGHMIPIVDMAKLFATRGVKASVITTP 72 (518)
Q Consensus 37 kIl~~~~~~~GH~~p~l~LA~~L~~rGH~Vt~~~~~ 72 (518)
|.+++..++.| --..+|+.|+++|++|.++...
T Consensus 30 k~vlITGas~g---IG~~la~~l~~~G~~V~~~~r~ 62 (271)
T 4iin_A 30 KNVLITGASKG---IGAEIAKTLASMGLKVWINYRS 62 (271)
T ss_dssp CEEEETTCSSH---HHHHHHHHHHHTTCEEEEEESS
T ss_pred CEEEEECCCcH---HHHHHHHHHHHCCCEEEEEeCC
Confidence 56666666543 4578999999999999988763
No 354
>2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A*
Probab=22.45 E-value=69 Score=29.58 Aligned_cols=33 Identities=24% Similarity=0.252 Sum_probs=23.9
Q ss_pred EEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCCC
Q 010093 37 HVFFFPFMAHGHMIPIVDMAKLFATRGVKASVITTPA 73 (518)
Q Consensus 37 kIl~~~~~~~GH~~p~l~LA~~L~~rGH~Vt~~~~~~ 73 (518)
+|++. |+.|.+ -..|+++|.++||+|+.++-..
T Consensus 13 ~ilVt--GatG~i--G~~l~~~L~~~g~~V~~l~R~~ 45 (318)
T 2r6j_A 13 KILIF--GGTGYI--GNHMVKGSLKLGHPTYVFTRPN 45 (318)
T ss_dssp CEEEE--TTTSTT--HHHHHHHHHHTTCCEEEEECTT
T ss_pred eEEEE--CCCchH--HHHHHHHHHHCCCcEEEEECCC
Confidence 55554 444544 4678999999999999887654
No 355
>1e6u_A GDP-fucose synthetase; epimerase/reductase, SDR, RED; HET: NAP; 1.45A {Escherichia coli} SCOP: c.2.1.2 PDB: 1e7q_A* 1bsv_A* 1fxs_A* 1gfs_A 1e7s_A* 1bws_A* 1e7r_A*
Probab=22.43 E-value=59 Score=30.02 Aligned_cols=33 Identities=21% Similarity=0.255 Sum_probs=23.3
Q ss_pred CcEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeC
Q 010093 35 QLHVFFFPFMAHGHMIPIVDMAKLFATRGVKASVITT 71 (518)
Q Consensus 35 ~~kIl~~~~~~~GH~~p~l~LA~~L~~rGH~Vt~~~~ 71 (518)
+|+|++. ++.|.+ -..|++.|.++||+|+.+..
T Consensus 3 ~~~ilVt--GatG~i--G~~l~~~L~~~g~~v~~~~r 35 (321)
T 1e6u_A 3 KQRVFIA--GHRGMV--GSAIRRQLEQRGDVELVLRT 35 (321)
T ss_dssp CEEEEEE--TTTSHH--HHHHHHHHTTCTTEEEECCC
T ss_pred CCEEEEE--CCCcHH--HHHHHHHHHhCCCeEEEEec
Confidence 4677665 444444 46789999999999887653
No 356
>3e5n_A D-alanine-D-alanine ligase A; bacterial blight; 2.00A {Xanthomonas oryzae PV} PDB: 3r5f_A* 3rfc_A*
Probab=22.39 E-value=52 Score=31.85 Aligned_cols=41 Identities=5% Similarity=-0.009 Sum_probs=29.1
Q ss_pred CCCcEEEEEcCCCccCh----HHHHHHHHHHHhCCCeEEEEeCCC
Q 010093 33 IPQLHVFFFPFMAHGHM----IPIVDMAKLFATRGVKASVITTPA 73 (518)
Q Consensus 33 ~~~~kIl~~~~~~~GH~----~p~l~LA~~L~~rGH~Vt~~~~~~ 73 (518)
|+++||+++..+.-+-- .-...++++|.+.||+|+.+-...
T Consensus 20 m~~~~v~vl~GG~S~E~evSl~Sa~~v~~al~~~~~~v~~i~i~~ 64 (386)
T 3e5n_A 20 MRKIRVGLIFGGKSAEHEVSLQSARNILDALDPQRFEPVLIGIDK 64 (386)
T ss_dssp -CCEEEEEEEECSSTTHHHHHHHHHHHHHHSCTTTEEEEEEEECT
T ss_pred cCCceEEEEeccCCCCchhHHHHHHHHHHHhCccCCEEEEEEECC
Confidence 34689988887643332 345588899989999999887543
No 357
>4e5v_A Putative THUA-like protein; THUA-like proteins, trehalose utilisation, structural genomi center for structural genomics, JCSG; 1.75A {Parabacteroides merdae}
Probab=22.31 E-value=1e+02 Score=28.26 Aligned_cols=38 Identities=11% Similarity=0.348 Sum_probs=28.8
Q ss_pred CCcEEEEEcCCCccChHHH--HHHHHHHHhCC-CeEEEEeCC
Q 010093 34 PQLHVFFFPFMAHGHMIPI--VDMAKLFATRG-VKASVITTP 72 (518)
Q Consensus 34 ~~~kIl~~~~~~~GH~~p~--l~LA~~L~~rG-H~Vt~~~~~ 72 (518)
++.|||++. +..+|-.+. ..|++.|.+.| ++|++...+
T Consensus 3 ~~~kvLiv~-G~~~H~~~~~~~~l~~~l~~~g~f~V~~~~d~ 43 (281)
T 4e5v_A 3 KPIKTLLIT-GQNNHNWQVSHVVLKQILENSGRFDVDFVISP 43 (281)
T ss_dssp CCEEEEEEE-SCCSSCHHHHHHHHHHHHHHTTSEEEEEEECC
T ss_pred CceEEEEEc-CCCCCChHHHHHHHHHHHHhcCCEEEEEEeCC
Confidence 678999994 444786443 57788888888 999999874
No 358
>2r25_B Osmosensing histidine protein kinase SLN1; alpha5-BETA5, response regulator, four helix bundle, histidine phosphotransfer (HPT) protein; 1.70A {Saccharomyces cerevisiae} SCOP: c.23.1.1 PDB: 1oxk_B 1oxb_B
Probab=22.30 E-value=1.6e+02 Score=22.49 Aligned_cols=32 Identities=9% Similarity=0.086 Sum_probs=21.5
Q ss_pred CCCCEEEecCCCc--cHHHHHHHc------CCCeEEEecc
Q 010093 146 HKPDCLVADTFFP--WATDAAAKF------GIPRLVFHGT 177 (518)
Q Consensus 146 ~~pDlVI~D~~~~--~~~~iA~~l------giP~v~~~~~ 177 (518)
.+||+||.|..++ .+..+++.+ .+|++.++..
T Consensus 51 ~~~dlvllD~~mp~~~G~~~~~~lr~~~~~~~~ii~lt~~ 90 (133)
T 2r25_B 51 ENYNMIFMDVQMPKVDGLLSTKMIRRDLGYTSPIVALTAF 90 (133)
T ss_dssp CCCSEEEECSCCSSSCHHHHHHHHHHHSCCCSCEEEEESC
T ss_pred CCCCEEEEeCCCCCCChHHHHHHHHhhcCCCCCEEEEECC
Confidence 6799999998665 355444332 4687777654
No 359
>4dad_A Putative pilus assembly-related protein; response regulator receiver domain, CHEY-related protein, ST genomics; 2.50A {Burkholderia pseudomallei} PDB: 4dn6_A
Probab=22.29 E-value=69 Score=25.17 Aligned_cols=40 Identities=20% Similarity=0.125 Sum_probs=25.4
Q ss_pred HHHHHHhh-CCCCEEEecCCCc--cHHHHHHHc-----CCCeEEEecc
Q 010093 138 PLEQLLQE-HKPDCLVADTFFP--WATDAAAKF-----GIPRLVFHGT 177 (518)
Q Consensus 138 ~l~~ll~~-~~pDlVI~D~~~~--~~~~iA~~l-----giP~v~~~~~ 177 (518)
.+..+.+. ..||+||+|..+. .+..+.+.+ ++|+|.++..
T Consensus 57 ~~~~~~~~~~~~dlvi~D~~l~~~~g~~~~~~l~~~~~~~~ii~lt~~ 104 (146)
T 4dad_A 57 QIVQRTDGLDAFDILMIDGAALDTAELAAIEKLSRLHPGLTCLLVTTD 104 (146)
T ss_dssp HHTTCHHHHTTCSEEEEECTTCCHHHHHHHHHHHHHCTTCEEEEEESC
T ss_pred HHHHHHhcCCCCCEEEEeCCCCCccHHHHHHHHHHhCCCCcEEEEeCC
Confidence 34444445 7899999997665 344444332 6788877664
No 360
>1kgs_A DRRD, DNA binding response regulator D; DNA-binding protein, ALPH-beta sandwich, winged-helix, helix helix, DNA binding protein; HET: DNA MSE; 1.50A {Thermotoga maritima} SCOP: a.4.6.1 c.23.1.1 PDB: 3nnn_A*
Probab=22.28 E-value=1.3e+02 Score=25.77 Aligned_cols=38 Identities=16% Similarity=0.237 Sum_probs=25.6
Q ss_pred HHHhhCCCCEEEecCCCc--cHHHHHHHc-----CCCeEEEecch
Q 010093 141 QLLQEHKPDCLVADTFFP--WATDAAAKF-----GIPRLVFHGTS 178 (518)
Q Consensus 141 ~ll~~~~pDlVI~D~~~~--~~~~iA~~l-----giP~v~~~~~~ 178 (518)
+.+...+||+||.|...+ .+..+.+.+ ++|++.++...
T Consensus 40 ~~~~~~~~dlvllD~~l~~~~g~~~~~~lr~~~~~~~ii~ls~~~ 84 (225)
T 1kgs_A 40 YMALNEPFDVVILDIMLPVHDGWEILKSMRESGVNTPVLMLTALS 84 (225)
T ss_dssp HHHHHSCCSEEEEESCCSSSCHHHHHHHHHHTTCCCCEEEEESSC
T ss_pred HHHhcCCCCEEEEeCCCCCCCHHHHHHHHHhcCCCCCEEEEeCCC
Confidence 345567899999997665 354444433 68988887654
No 361
>3nva_A CTP synthase; rossman fold, nucleotide binding, LIG; 2.50A {Sulfolobus solfataricus}
Probab=22.20 E-value=87 Score=31.63 Aligned_cols=41 Identities=10% Similarity=0.096 Sum_probs=33.3
Q ss_pred cEEEEEcCC---CccChHHHHHHHHHHHhCCCeEEEEeCCCCcc
Q 010093 36 LHVFFFPFM---AHGHMIPIVDMAKLFATRGVKASVITTPANAP 76 (518)
Q Consensus 36 ~kIl~~~~~---~~GH~~p~l~LA~~L~~rGH~Vt~~~~~~~~~ 76 (518)
+|.+|++.+ +.|-=.-...|+..|..||++||++=-+++.+
T Consensus 3 ~k~i~vtggv~s~lgkgi~~as~g~ll~~~g~~v~~~k~dpyln 46 (535)
T 3nva_A 3 NKYIVVTGGVLSSVGKGTLVASIGMLLKRRGYNVTAVKIDPYIN 46 (535)
T ss_dssp CEEEEEECCCSTTTTHHHHHHHHHHHHHHTTCCEEEEEEECSSS
T ss_pred ceEEEEeCccccCcchHHHHHHHHHHHHHCCceEEEEecCccee
Confidence 688898876 55666778999999999999999987666544
No 362
>4fu0_A D-alanine--D-alanine ligase 7; vancomycin resistance, peptidoglycan synthesis, D-Ala:D-Ser ATP-grAsp domain; HET: ADP; 2.35A {Enterococcus faecalis}
Probab=22.20 E-value=49 Score=31.56 Aligned_cols=39 Identities=5% Similarity=-0.128 Sum_probs=26.6
Q ss_pred CCCcEEEEEcCCCcc-C---hHHHHHHHHHHHhCCCeEEEEeC
Q 010093 33 IPQLHVFFFPFMAHG-H---MIPIVDMAKLFATRGVKASVITT 71 (518)
Q Consensus 33 ~~~~kIl~~~~~~~G-H---~~p~l~LA~~L~~rGH~Vt~~~~ 71 (518)
|++.||+++..|.-+ | +.-...++++|.+.||+|+.+..
T Consensus 1 M~kkkv~vl~GG~S~E~evSl~Sa~~v~~aL~~~gy~v~~i~i 43 (357)
T 4fu0_A 1 MQNKKIAVIFGGNSTEYEVSLQSASAVFENINTNKFDIIPIGI 43 (357)
T ss_dssp -CCEEEEEEEECSSTTHHHHHHHHHHHHHHSCTTTEEEEEEEE
T ss_pred CCCCEEEEEECCCccchHHHHHHHHHHHHHHhHhCCEEEEEEE
Confidence 345699887544222 3 34456789999999999998743
No 363
>2q8p_A Iron-regulated surface determinant E; helical backbone metal receptor superfamily, metal transport; HET: HEM; 1.95A {Staphylococcus aureus subsp} PDB: 2q8q_A*
Probab=22.20 E-value=63 Score=28.88 Aligned_cols=34 Identities=6% Similarity=0.083 Sum_probs=22.8
Q ss_pred HhhCCCCEEEecCCCc-cHHHHHHHcCCCeEEEec
Q 010093 143 LQEHKPDCLVADTFFP-WATDAAAKFGIPRLVFHG 176 (518)
Q Consensus 143 l~~~~pDlVI~D~~~~-~~~~iA~~lgiP~v~~~~ 176 (518)
+.+.+||+||+..... .....-++.|||++.+..
T Consensus 56 i~~l~PDLIi~~~~~~~~~~~~L~~~gipvv~~~~ 90 (260)
T 2q8p_A 56 VKKLKPTHVLSVSTIKDEMQPFYKQLNMKGYFYDF 90 (260)
T ss_dssp HHHTCCSEEEEEGGGHHHHHHHHHHHTSCCEEECC
T ss_pred HHhcCCCEEEecCccCHHHHHHHHHcCCcEEEecC
Confidence 4457999999864332 234445678999988643
No 364
>3f5d_A Protein YDEA; unknow protein, PSI-II, nysgrc, structural genomics, protein structure initiative; 2.06A {Bacillus subtilis}
Probab=22.15 E-value=74 Score=27.60 Aligned_cols=38 Identities=11% Similarity=0.057 Sum_probs=29.5
Q ss_pred CcEEEEEcCCCccChHHHHHHHHHHHhC-CCeEEEEeCCC
Q 010093 35 QLHVFFFPFMAHGHMIPIVDMAKLFATR-GVKASVITTPA 73 (518)
Q Consensus 35 ~~kIl~~~~~~~GH~~p~l~LA~~L~~r-GH~Vt~~~~~~ 73 (518)
|.||+|+-.++...+- +...++.|.++ |++|+++++..
T Consensus 3 m~kV~ill~~g~~~~E-~~~~~~~l~~~~~~~v~~vs~~~ 41 (206)
T 3f5d_A 3 LKKALFLILDQYADWE-GVYLASALNQREDWSVHTVSLDP 41 (206)
T ss_dssp CEEEEEECCSSBCTTT-SHHHHHHHHTSTTEEEEEEESSS
T ss_pred ccEEEEEEcCCCcHHH-HHHHHHHHhccCCeEEEEEECCC
Confidence 5689888888776654 44667788887 99999999864
No 365
>4hn9_A Iron complex transport system substrate-binding P; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 1.85A {Eubacterium eligens}
Probab=22.13 E-value=66 Score=30.22 Aligned_cols=34 Identities=18% Similarity=0.240 Sum_probs=22.9
Q ss_pred HhhCCCCEEEecCCCccHHHHHHHcCCCeEEEec
Q 010093 143 LQEHKPDCLVADTFFPWATDAAAKFGIPRLVFHG 176 (518)
Q Consensus 143 l~~~~pDlVI~D~~~~~~~~iA~~lgiP~v~~~~ 176 (518)
+.+.+||+||..........--++.|||++.+..
T Consensus 112 i~al~PDLIi~~~~~~~~~~~L~~~gipvv~~~~ 145 (335)
T 4hn9_A 112 CVAATPDVVFLPMKLKKTADTLESLGIKAVVVNP 145 (335)
T ss_dssp HHHTCCSEEEEEGGGHHHHHHHHHTTCCEEEECC
T ss_pred HHhcCCCEEEEeCcchhHHHHHHHcCCCEEEEcC
Confidence 4457999999875432333344677999998743
No 366
>1ybh_A Acetolactate synthase, chloroplast; acetohydroxyacid synthase, herbicide, sulfonylurea, thiamin diphosphate, FAD, inhibitor; HET: CIE NHE FAD P22; 2.50A {Arabidopsis thaliana} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 1yhy_A* 1yhz_A* 1yi0_A* 1yi1_A* 1z8n_A* 3ea4_A* 3e9y_A*
Probab=22.09 E-value=1.8e+02 Score=29.83 Aligned_cols=27 Identities=26% Similarity=0.322 Sum_probs=22.0
Q ss_pred CcccccccCch------hHHHHHHhCCceecCC
Q 010093 396 VGGFVTHCGWN------STLEAVAAGVPLVTWP 422 (518)
Q Consensus 396 ~~~~ItHgG~~------s~~eal~~GvP~l~~P 422 (518)
..++++|.|.| .+.||-+.++|+|++-
T Consensus 76 p~v~~~TsGpG~~N~~~gv~~A~~~~vPll~it 108 (590)
T 1ybh_A 76 PGICIATSGPGATNLVSGLADALLDSVPLVAIT 108 (590)
T ss_dssp CEEEEECTTHHHHTTHHHHHHHHHHTCCEEEEE
T ss_pred CEEEEeccCchHHHHHHHHHHHHhhCCCEEEEe
Confidence 44588888855 7889999999999974
No 367
>1sqs_A Conserved hypothetical protein; structural genomics, alpha beta protein, PSI, protein struct initiative; HET: TLA; 1.50A {Streptococcus pneumoniae} SCOP: c.23.5.5 PDB: 2oys_A*
Probab=22.07 E-value=80 Score=27.99 Aligned_cols=37 Identities=14% Similarity=0.305 Sum_probs=24.1
Q ss_pred CcEEEEEcCCCc--cChHHHHH-HHHHHHhC-CCeEEEEeC
Q 010093 35 QLHVFFFPFMAH--GHMIPIVD-MAKLFATR-GVKASVITT 71 (518)
Q Consensus 35 ~~kIl~~~~~~~--GH~~p~l~-LA~~L~~r-GH~Vt~~~~ 71 (518)
||||+++....+ |+..-+.. +++.|.++ |++|.++..
T Consensus 1 MmkIliI~gS~r~~s~T~~la~~i~~~l~~~~g~~v~~~dl 41 (242)
T 1sqs_A 1 MNKIFIYAGVRNHNSKTLEYTKRLSSIISSRNNVDISFRTP 41 (242)
T ss_dssp CCEEEEEECCCCTTCHHHHHHHHHHHHHHHHSCCEEEEECT
T ss_pred CCeEEEEECCCCCCChHHHHHHHHHHHHHHhcCCeEEEEEc
Confidence 468886654433 66555544 56667777 999988754
No 368
>2i87_A D-alanine-D-alanine ligase; APO; 2.00A {Staphylococcus aureus subsp} PDB: 2i8c_A* 3n8d_A* 2i80_A*
Probab=22.01 E-value=44 Score=31.98 Aligned_cols=39 Identities=5% Similarity=0.056 Sum_probs=27.0
Q ss_pred CCcEEEEEcCCCcc-C---hHHHHHHHHHHHhCCCeEEEEeCC
Q 010093 34 PQLHVFFFPFMAHG-H---MIPIVDMAKLFATRGVKASVITTP 72 (518)
Q Consensus 34 ~~~kIl~~~~~~~G-H---~~p~l~LA~~L~~rGH~Vt~~~~~ 72 (518)
.++||+++..+..+ | +.-...++++|.++||+|..+...
T Consensus 2 ~~~~v~vl~gg~s~E~~vs~~s~~~v~~al~~~g~~v~~i~~~ 44 (364)
T 2i87_A 2 TKENICIVFGGKSAEHEVSILTAQNVLNAIDKDKYHVDIIYIT 44 (364)
T ss_dssp -CEEEEEEEECSSSCHHHHHHHHHHHHHTSCTTTEEEEEEEEC
T ss_pred CCcEEEEEECCCCccchhHHHHHHHHHHHHhhcCCEEEEEEEc
Confidence 45788877754222 2 234578899999999999988653
No 369
>2qv0_A Protein MRKE; structural genomics, transcription, PSI-2, protein structure initiative; 2.40A {Klebsiella pneumoniae}
Probab=21.99 E-value=1.4e+02 Score=23.08 Aligned_cols=29 Identities=24% Similarity=0.264 Sum_probs=19.5
Q ss_pred HHHHHhhCCCCEEEecCCCc--cHHHHHHHc
Q 010093 139 LEQLLQEHKPDCLVADTFFP--WATDAAAKF 167 (518)
Q Consensus 139 l~~ll~~~~pDlVI~D~~~~--~~~~iA~~l 167 (518)
..+.++..+||+||+|.... .+..+++.+
T Consensus 47 al~~l~~~~~dlvi~d~~l~~~~g~~~~~~l 77 (143)
T 2qv0_A 47 VLKFLQHNKVDAIFLDINIPSLDGVLLAQNI 77 (143)
T ss_dssp HHHHHHHCCCSEEEECSSCSSSCHHHHHHHH
T ss_pred HHHHHHhCCCCEEEEecCCCCCCHHHHHHHH
Confidence 33445567899999997654 466666655
No 370
>3zq6_A Putative arsenical pump-driving ATPase; tail-anchored, membrane protein; HET: ADP; 2.11A {Methanothermobacter thermautotrophicusorganism_taxid}
Probab=21.87 E-value=1e+02 Score=28.77 Aligned_cols=45 Identities=27% Similarity=0.183 Sum_probs=35.7
Q ss_pred cEEEEEc-CCCccChHHHHHHHHHHHhCCCeEEEEeCCCCccchhhh
Q 010093 36 LHVFFFP-FMAHGHMIPIVDMAKLFATRGVKASVITTPANAPYVSKS 81 (518)
Q Consensus 36 ~kIl~~~-~~~~GH~~p~l~LA~~L~~rGH~Vt~~~~~~~~~~~~~~ 81 (518)
.+|+|+. -++-|-..-...||..|+++|++|.++..+. ...+...
T Consensus 14 ~~i~v~sgKGGvGKTTvA~~LA~~lA~~G~rVLlvD~D~-~~~l~~~ 59 (324)
T 3zq6_A 14 TTFVFIGGKGGVGKTTISAATALWMARSGKKTLVISTDP-AHSLSDS 59 (324)
T ss_dssp CEEEEEEESTTSSHHHHHHHHHHHHHHTTCCEEEEECCS-SCCHHHH
T ss_pred eEEEEEeCCCCchHHHHHHHHHHHHHHCCCcEEEEeCCC-CcCHHHH
Confidence 4666554 6699999999999999999999999999876 4444433
No 371
>1zi8_A Carboxymethylenebutenolidase; alpha and beta proteins, 3-D structure, serine esterase, HYD aromatic hydrocarbons, catabolism; 1.40A {Pseudomonas putida} PDB: 1zj5_A* 1zi9_A 1zi6_A 1zj4_A* 1din_A 1ziy_A* 1zic_A 1zix_A 1ggv_A*
Probab=21.76 E-value=1.2e+02 Score=25.83 Aligned_cols=37 Identities=11% Similarity=0.029 Sum_probs=28.6
Q ss_pred CcEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeC
Q 010093 35 QLHVFFFPFMAHGHMIPIVDMAKLFATRGVKASVITT 71 (518)
Q Consensus 35 ~~kIl~~~~~~~GH~~p~l~LA~~L~~rGH~Vt~~~~ 71 (518)
...++++.++..|...-+..+++.|.++|+.|..+-.
T Consensus 27 ~~p~vv~~hG~~~~~~~~~~~~~~l~~~g~~v~~~d~ 63 (236)
T 1zi8_A 27 PAPVIVIAQDIFGVNAFMRETVSWLVDQGYAAVCPDL 63 (236)
T ss_dssp SEEEEEEECCTTBSCHHHHHHHHHHHHTTCEEEEECG
T ss_pred CCCEEEEEcCCCCCCHHHHHHHHHHHhCCcEEEeccc
Confidence 3456666677777777899999999999998866543
No 372
>2hpv_A FMN-dependent NADH-azoreductase; structural genomics, PS protein structure initiative, southeast collaboratory for S genomics, secsg; HET: FMN; 2.00A {Enterococcus faecalis}
Probab=21.73 E-value=81 Score=27.04 Aligned_cols=37 Identities=0% Similarity=0.093 Sum_probs=23.1
Q ss_pred CcEEEEE-cCCC---ccChHHHHH-HHHHHHhCC--CeEEEEeC
Q 010093 35 QLHVFFF-PFMA---HGHMIPIVD-MAKLFATRG--VKASVITT 71 (518)
Q Consensus 35 ~~kIl~~-~~~~---~GH~~p~l~-LA~~L~~rG--H~Vt~~~~ 71 (518)
||||+++ .++- .|+..-+.. +++.|.++| |+|.++--
T Consensus 1 M~kilii~gS~r~~~~s~t~~la~~~~~~~~~~g~~~~v~~~dL 44 (208)
T 2hpv_A 1 MSKLLVVKAHPLTKEESRSVRALETFLASYRETNPSDEIEILDV 44 (208)
T ss_dssp -CEEEEEECCSSCTTTCHHHHHHHHHHHHHHHHCTTSEEEEEET
T ss_pred CCeEEEEEecCCCCCCCHHHHHHHHHHHHHHHhCCCCeEEEeeC
Confidence 4687744 4555 366665543 567777777 88887754
No 373
>3rof_A Low molecular weight protein-tyrosine-phosphatase; phosphatase, hydrolase; 1.03A {Staphylococcus aureus}
Probab=21.71 E-value=1.1e+02 Score=25.36 Aligned_cols=31 Identities=10% Similarity=-0.087 Sum_probs=21.5
Q ss_pred CCCcEEEEEcCCCccChHHHHHHHHHHHh-CC
Q 010093 33 IPQLHVFFFPFMAHGHMIPIVDMAKLFAT-RG 63 (518)
Q Consensus 33 ~~~~kIl~~~~~~~GH~~p~l~LA~~L~~-rG 63 (518)
|.|+||||+|.+-..---..-.|.+.+.+ +|
T Consensus 4 ~~m~~vLFVC~gN~cRSpmAE~i~~~~~~~~g 35 (158)
T 3rof_A 4 QGMVDVAFVCLGNICRSPMAEAIMRQRLKDRN 35 (158)
T ss_dssp CSCEEEEEEESSSSSHHHHHHHHHHHHHHHTT
T ss_pred CCCCEEEEEeCCchhHHHHHHHHHHHHHHHcC
Confidence 45789999999865555555667777753 44
No 374
>3q9s_A DNA-binding response regulator; DNA binding protein; 2.40A {Deinococcus radiodurans}
Probab=21.62 E-value=1.3e+02 Score=26.58 Aligned_cols=39 Identities=21% Similarity=0.351 Sum_probs=26.3
Q ss_pred HHHHhhCCCCEEEecCCCc--cHHHHHHHc----CCCeEEEecch
Q 010093 140 EQLLQEHKPDCLVADTFFP--WATDAAAKF----GIPRLVFHGTS 178 (518)
Q Consensus 140 ~~ll~~~~pDlVI~D~~~~--~~~~iA~~l----giP~v~~~~~~ 178 (518)
.+.+...+||+||.|..++ .+..+.+.+ ++|++.++...
T Consensus 74 l~~~~~~~~DlvllD~~lp~~~G~~l~~~lr~~~~~~iI~lt~~~ 118 (249)
T 3q9s_A 74 LIKAREDHPDLILLDLGLPDFDGGDVVQRLRKNSALPIIVLTARD 118 (249)
T ss_dssp HHHHHHSCCSEEEEECCSCHHHHHHHHHHHHTTCCCCEEEEESCC
T ss_pred HHHHhcCCCCEEEEcCCCCCCCHHHHHHHHHcCCCCCEEEEECCC
Confidence 3445567899999998766 355555443 68888876643
No 375
>4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli}
Probab=21.60 E-value=94 Score=28.19 Aligned_cols=33 Identities=24% Similarity=0.158 Sum_probs=25.2
Q ss_pred EEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCC
Q 010093 37 HVFFFPFMAHGHMIPIVDMAKLFATRGVKASVITTP 72 (518)
Q Consensus 37 kIl~~~~~~~GH~~p~l~LA~~L~~rGH~Vt~~~~~ 72 (518)
|++++..++.| --..+|+.|+++|++|.++...
T Consensus 28 k~vlVTGas~G---IG~aia~~l~~~G~~V~~~~r~ 60 (277)
T 4dqx_A 28 RVCIVTGGGSG---IGRATAELFAKNGAYVVVADVN 60 (277)
T ss_dssp CEEEEETTTSH---HHHHHHHHHHHTTCEEEEEESS
T ss_pred CEEEEECCCcH---HHHHHHHHHHHCCCEEEEEeCC
Confidence 66777766543 4578999999999999887653
No 376
>1oi4_A Hypothetical protein YHBO; PFPI/THIJ family, complete proteome, PFPI, THIJ, bacterial targets at IGS-CNRS, france, BIGS, structural genomics; 2.03A {Escherichia coli} SCOP: c.23.16.2
Probab=21.48 E-value=1.7e+02 Score=24.71 Aligned_cols=39 Identities=13% Similarity=0.008 Sum_probs=30.0
Q ss_pred CCcEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCCC
Q 010093 34 PQLHVFFFPFMAHGHMIPIVDMAKLFATRGVKASVITTPA 73 (518)
Q Consensus 34 ~~~kIl~~~~~~~GH~~p~l~LA~~L~~rGH~Vt~~~~~~ 73 (518)
+++||+|+.+++.. ..-+....+.|...|++|+++++..
T Consensus 22 ~~~kV~ill~~g~~-~~e~~~~~~~l~~ag~~v~~vs~~~ 60 (193)
T 1oi4_A 22 LSKKIAVLITDEFE-DSEFTSPADEFRKAGHEVITIEKQA 60 (193)
T ss_dssp CCCEEEEECCTTBC-THHHHHHHHHHHHTTCEEEEEESST
T ss_pred cCCEEEEEECCCCC-HHHHHHHHHHHHHCCCEEEEEECCC
Confidence 35689988887655 3445667788889999999999864
No 377
>3euw_A MYO-inositol dehydrogenase; protein structure initiative II (PSI II), NYSGXRC, MYO-inosi dehydrogenase, oxidoreductase, tetramer; 2.30A {Corynebacterium glutamicum}
Probab=21.45 E-value=4.9e+02 Score=24.05 Aligned_cols=110 Identities=15% Similarity=0.138 Sum_probs=61.2
Q ss_pred EEEEecCCcccCCHHHHHHHHHHHHhC-CCcEEEEEcCCCCCCCCCCCCCCChhHHHHHhcCCCcEeecCccHHHhhccC
Q 010093 316 VVYVCFGSLANFTSAQLMEIATGLEAS-GRNFIWVVSKNKNDGGEGGNEDWLPEGFEKRMEGKGLIIRGWAPQVLILDHE 394 (518)
Q Consensus 316 vIyvslGS~~~~~~~~~~~l~~al~~~-~~~~i~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~nv~~~~~~pq~~lL~~~ 394 (518)
+.+|.+|.+.. ..+.++... +..++....... + --+.+.. .-++. .+-...+++..+
T Consensus 7 vgiiG~G~~g~-------~~~~~l~~~~~~~l~av~d~~~------~----~~~~~a~---~~g~~--~~~~~~~~l~~~ 64 (344)
T 3euw_A 7 IALFGAGRIGH-------VHAANIAANPDLELVVIADPFI------E----GAQRLAE---ANGAE--AVASPDEVFARD 64 (344)
T ss_dssp EEEECCSHHHH-------HHHHHHHHCTTEEEEEEECSSH------H----HHHHHHH---TTTCE--EESSHHHHTTCS
T ss_pred EEEECCcHHHH-------HHHHHHHhCCCcEEEEEECCCH------H----HHHHHHH---HcCCc--eeCCHHHHhcCC
Confidence 77888887652 355566655 455555554322 0 0111111 11222 234567888866
Q ss_pred CCcccccccCch----hHHHHHHhCCceec-CCccc--ccchhHHHHHHhhhcceeeccc
Q 010093 395 AVGGFVTHCGWN----STLEAVAAGVPLVT-WPVAA--EQFYNEKMVNEILKIGVGVGIQ 447 (518)
Q Consensus 395 ~~~~~ItHgG~~----s~~eal~~GvP~l~-~P~~~--DQ~~na~~v~e~~G~G~~l~~~ 447 (518)
++++++---... -+.+|+.+|+++++ -|+.. ++-.-...++++.|+-+.+...
T Consensus 65 ~~D~V~i~tp~~~h~~~~~~al~~gk~v~~EKP~~~~~~~~~~l~~~a~~~g~~~~v~~~ 124 (344)
T 3euw_A 65 DIDGIVIGSPTSTHVDLITRAVERGIPALCEKPIDLDIEMVRACKEKIGDGASKVMLGFN 124 (344)
T ss_dssp CCCEEEECSCGGGHHHHHHHHHHTTCCEEECSCSCSCHHHHHHHHHHHGGGGGGEEECCG
T ss_pred CCCEEEEeCCchhhHHHHHHHHHcCCcEEEECCCCCCHHHHHHHHHHHHhcCCeEEecch
Confidence 777676544333 46788999999886 46433 3433333333677877776543
No 378
>3cky_A 2-hydroxymethyl glutarate dehydrogenase; rossmann fold, two domain enzyme, oxidoreductase; 2.30A {Eubacterium barkeri}
Probab=21.44 E-value=91 Score=28.54 Aligned_cols=33 Identities=21% Similarity=0.248 Sum_probs=24.7
Q ss_pred CCcEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeC
Q 010093 34 PQLHVFFFPFMAHGHMIPIVDMAKLFATRGVKASVITT 71 (518)
Q Consensus 34 ~~~kIl~~~~~~~GH~~p~l~LA~~L~~rGH~Vt~~~~ 71 (518)
++|||+|+=.+..|. .+|+.|.+.||+|+++..
T Consensus 3 ~~~~i~iiG~G~~G~-----~~a~~l~~~g~~V~~~~~ 35 (301)
T 3cky_A 3 KSIKIGFIGLGAMGK-----PMAINLLKEGVTVYAFDL 35 (301)
T ss_dssp -CCEEEEECCCTTHH-----HHHHHHHHTTCEEEEECS
T ss_pred CCCEEEEECccHHHH-----HHHHHHHHCCCeEEEEeC
Confidence 367999996666554 568889999999987643
No 379
>1yb4_A Tartronic semialdehyde reductase; structural genomics, oxidoreductase, salmonella typhimurium LT2, PSI, protein ST initiative; 2.40A {Salmonella typhimurium}
Probab=21.40 E-value=64 Score=29.48 Aligned_cols=32 Identities=25% Similarity=0.237 Sum_probs=23.4
Q ss_pred CCcEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEe
Q 010093 34 PQLHVFFFPFMAHGHMIPIVDMAKLFATRGVKASVIT 70 (518)
Q Consensus 34 ~~~kIl~~~~~~~GH~~p~l~LA~~L~~rGH~Vt~~~ 70 (518)
.||||+|+=.+..|. .+|+.|.+.||+|+++.
T Consensus 2 ~~m~i~iiG~G~~G~-----~~a~~l~~~g~~V~~~~ 33 (295)
T 1yb4_A 2 NAMKLGFIGLGIMGS-----PMAINLARAGHQLHVTT 33 (295)
T ss_dssp --CEEEECCCSTTHH-----HHHHHHHHTTCEEEECC
T ss_pred CCCEEEEEccCHHHH-----HHHHHHHhCCCEEEEEc
Confidence 357999886666553 57888999999998664
No 380
>3bfv_A CAPA1, CAPB2, membrane protein CAPA1, protein tyrosine kinase; chimerical protein, P-loop protein, capsule biogenesis/degradation; HET: ADP; 1.80A {Staphylococcus aureus} PDB: 2ved_A*
Probab=21.39 E-value=98 Score=28.08 Aligned_cols=42 Identities=12% Similarity=0.173 Sum_probs=32.9
Q ss_pred CCcEEE-EEc-CCCccChHHHHHHHHHHHhCCCeEEEEeCCCCc
Q 010093 34 PQLHVF-FFP-FMAHGHMIPIVDMAKLFATRGVKASVITTPANA 75 (518)
Q Consensus 34 ~~~kIl-~~~-~~~~GH~~p~l~LA~~L~~rGH~Vt~~~~~~~~ 75 (518)
+++|++ |.+ .++-|-..-...||..|+++|..|.++-.+...
T Consensus 80 ~~~kvI~vts~kgG~GKTt~a~nLA~~lA~~G~rVLLID~D~~~ 123 (271)
T 3bfv_A 80 SAVQSIVITSEAPGAGKSTIAANLAVAYAQAGYKTLIVDGDMRK 123 (271)
T ss_dssp CCCCEEEEECSSTTSSHHHHHHHHHHHHHHTTCCEEEEECCSSS
T ss_pred CCCeEEEEECCCCCCcHHHHHHHHHHHHHhCCCeEEEEeCCCCC
Confidence 445655 443 468899999999999999999999999776443
No 381
>1k68_A Phytochrome response regulator RCPA; phosphorylated aspartate, CHEY homologue, homodimer, (beta/alpha)5, signaling protein; HET: PHD; 1.90A {Tolypothrix SP} SCOP: c.23.1.1
Probab=21.37 E-value=1.5e+02 Score=22.48 Aligned_cols=33 Identities=21% Similarity=0.341 Sum_probs=22.4
Q ss_pred CCCCEEEecCCCc--cHHHHHHH-------cCCCeEEEecch
Q 010093 146 HKPDCLVADTFFP--WATDAAAK-------FGIPRLVFHGTS 178 (518)
Q Consensus 146 ~~pDlVI~D~~~~--~~~~iA~~-------lgiP~v~~~~~~ 178 (518)
..||+||.|.... .+..+.+. -++|++.++...
T Consensus 54 ~~~dlvi~d~~~~~~~g~~~~~~l~~~~~~~~~pii~ls~~~ 95 (140)
T 1k68_A 54 SRPDLILLXLNLPKKDGREVLAEIKSDPTLKRIPVVVLSTSI 95 (140)
T ss_dssp CCCSEEEECSSCSSSCHHHHHHHHHHSTTGGGSCEEEEESCC
T ss_pred CCCcEEEEecCCCcccHHHHHHHHHcCcccccccEEEEecCC
Confidence 6899999997654 34444433 367888877643
No 382
>1js1_X Transcarbamylase; alpha/beta topology, two domains, transferase; 2.00A {Bacteroides fragilis} SCOP: c.78.1.1 c.78.1.1 PDB: 2fg6_X* 2fg7_X* 2g7m_X*
Probab=21.32 E-value=94 Score=29.21 Aligned_cols=38 Identities=5% Similarity=-0.033 Sum_probs=19.0
Q ss_pred cEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCCC
Q 010093 36 LHVFFFPFMAHGHMIPIVDMAKLFATRGVKASVITTPA 73 (518)
Q Consensus 36 ~kIl~~~~~~~GH~~p~l~LA~~L~~rGH~Vt~~~~~~ 73 (518)
++|.+.|+|..|+-+-...++..|..-|.+|++++|+.
T Consensus 169 l~ia~a~~~~vGD~rva~Sl~~~~~~~G~~v~~~~P~~ 206 (324)
T 1js1_X 169 VVMTWAPHPRPLPQAVPNSFAEWMNATDYEFVITHPEG 206 (324)
T ss_dssp EEEECCCCSSCCCSHHHHHHHHHHHTSSSEEEEECCTT
T ss_pred EEEEEEcccccCCcchHHHHHHHHHHCCCEEEEeCCcc
Confidence 34455555555554444444555544555555555543
No 383
>2z1m_A GDP-D-mannose dehydratase; short-chain dehydrogenase/reductase, lyase, structural genom NPPSFA; HET: NDP GDP; 2.00A {Aquifex aeolicus} PDB: 2z95_A*
Probab=21.28 E-value=86 Score=29.10 Aligned_cols=34 Identities=15% Similarity=0.079 Sum_probs=23.8
Q ss_pred CcEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCC
Q 010093 35 QLHVFFFPFMAHGHMIPIVDMAKLFATRGVKASVITTP 72 (518)
Q Consensus 35 ~~kIl~~~~~~~GH~~p~l~LA~~L~~rGH~Vt~~~~~ 72 (518)
.++|++. |+.|.+ -..|++.|+++||+|+.+.-.
T Consensus 3 ~~~vlVt--GatG~i--G~~l~~~L~~~G~~V~~~~r~ 36 (345)
T 2z1m_A 3 GKRALIT--GIRGQD--GAYLAKLLLEKGYEVYGADRR 36 (345)
T ss_dssp CCEEEEE--TTTSHH--HHHHHHHHHHTTCEEEEECSC
T ss_pred CCEEEEE--CCCChH--HHHHHHHHHHCCCEEEEEECC
Confidence 3566654 333433 467899999999999988654
No 384
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=21.25 E-value=31 Score=34.46 Aligned_cols=34 Identities=6% Similarity=0.129 Sum_probs=27.2
Q ss_pred CCcEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCC
Q 010093 34 PQLHVFFFPFMAHGHMIPIVDMAKLFATRGVKASVITTP 72 (518)
Q Consensus 34 ~~~kIl~~~~~~~GH~~p~l~LA~~L~~rGH~Vt~~~~~ 72 (518)
..|||+++=.+-.| ..||+.|.+.||+|+++=..
T Consensus 2 ~~M~iiI~G~G~vG-----~~la~~L~~~~~~v~vId~d 35 (461)
T 4g65_A 2 NAMKIIILGAGQVG-----GTLAENLVGENNDITIVDKD 35 (461)
T ss_dssp CCEEEEEECCSHHH-----HHHHHHTCSTTEEEEEEESC
T ss_pred CcCEEEEECCCHHH-----HHHHHHHHHCCCCEEEEECC
Confidence 35899988776554 46999999999999998653
No 385
>2vzf_A NADH-dependent FMN reductase; oxidoreductase; 2.50A {Edta-degrading bacterium BNC1} PDB: 2vzh_A* 2vzj_A*
Probab=21.14 E-value=93 Score=26.50 Aligned_cols=37 Identities=5% Similarity=0.030 Sum_probs=24.1
Q ss_pred CcEEEEEcCCC--ccChHHHHH-HHHH-HHhCCCeEEEEeC
Q 010093 35 QLHVFFFPFMA--HGHMIPIVD-MAKL-FATRGVKASVITT 71 (518)
Q Consensus 35 ~~kIl~~~~~~--~GH~~p~l~-LA~~-L~~rGH~Vt~~~~ 71 (518)
||||+++.... .|+..-+.. +++. |.++|++|.++--
T Consensus 2 Mmkilii~gS~r~~g~t~~la~~i~~~~l~~~g~~v~~~dl 42 (197)
T 2vzf_A 2 TYSIVAISGSPSRNSTTAKLAEYALAHVLARSDSQGRHIHV 42 (197)
T ss_dssp CEEEEEEECCSSTTCHHHHHHHHHHHHHHHHSSEEEEEEEG
T ss_pred CceEEEEECCCCCCChHHHHHHHHHHHHHHHCCCeEEEEEc
Confidence 46888666443 466555554 4566 7778999887653
No 386
>3ih5_A Electron transfer flavoprotein alpha-subunit; alpha-beta-alpha sandwich, structural genomics, PSI-2, protein structure initiative; 2.60A {Bacteroides thetaiotaomicron}
Probab=21.10 E-value=70 Score=28.11 Aligned_cols=111 Identities=9% Similarity=0.145 Sum_probs=62.7
Q ss_pred CcEEEEEcCCCccChHH----HHHHHHHHHhC-CCeEEEEeCCC-CccchhhhhhhhhccCCCeEEEEeeCCCccCCCCC
Q 010093 35 QLHVFFFPFMAHGHMIP----IVDMAKLFATR-GVKASVITTPA-NAPYVSKSVERANELGIEMDVKTIKFPSVEAGLPE 108 (518)
Q Consensus 35 ~~kIl~~~~~~~GH~~p----~l~LA~~L~~r-GH~Vt~~~~~~-~~~~~~~~~~~~~~~g~~i~~~~ip~~~~~~~l~~ 108 (518)
|..|+++.--..|.++| ++.-|++|++. |-+|+.++-.. ..+..+.... .|.. +.+.+.. .
T Consensus 3 m~~ilV~~E~~~g~l~~~s~ell~~A~~La~~~g~~v~av~~G~~~~~~~~~~~~----~Gad-~v~~v~~--------~ 69 (217)
T 3ih5_A 3 ANNLFVYCEIEEGIVADVSLELLTKGRSLANELNCQLEAVVAGTGLKEIEKQILP----YGVD-KLHVFDA--------E 69 (217)
T ss_dssp CCCEEEECCEETTEECHHHHHHHHHHHHHHHHHTCCEEEEEEESCCTTTHHHHGG----GTCS-EEEEEEC--------G
T ss_pred cccEEEEEECcCCEECHHHHHHHHHHHHHHHhcCCeEEEEEECCCHHHHHHHHHh----cCCC-EEEEecC--------c
Confidence 45688888666666655 57778888764 77777554332 2222332211 1321 1222220 0
Q ss_pred CCCccccccchhhhhhHHHHHHHHHhhHHHHHHHHhhCCCCEEEecCCCc---cHHHHHHHcCCCeEEEe
Q 010093 109 GCENLDAITNEVNKGLIVKFFGATMKLQEPLEQLLQEHKPDCLVADTFFP---WATDAAAKFGIPRLVFH 175 (518)
Q Consensus 109 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~~pDlVI~D~~~~---~~~~iA~~lgiP~v~~~ 175 (518)
....... ....+.+.+++++.+||+|++..... .+..+|.++++|.+.-.
T Consensus 70 ~~~~~~~-----------------~~~a~~l~~~i~~~~p~~Vl~g~t~~G~~laprlAa~L~~~~~sdv 122 (217)
T 3ih5_A 70 GLYPYTS-----------------LPHTSILVNLFKEEQPQICLMGATVIGRDLGPRVSSALTSGLTADC 122 (217)
T ss_dssp GGSSCCH-----------------HHHHHHHHHHHHHHCCSEEEEECSHHHHHHHHHHHHHTTCCCBCSC
T ss_pred ccccCCH-----------------HHHHHHHHHHHHhcCCCEEEEeCCcchhhHHHHHHHHhCCCccceE
Confidence 0111100 12233556667777999999987554 47889999999988643
No 387
>2l82_A Designed protein OR32; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, de novo protein; NMR {Artificial gene}
Probab=21.05 E-value=1.8e+02 Score=21.94 Aligned_cols=35 Identities=23% Similarity=0.412 Sum_probs=27.8
Q ss_pred EEEEecCCcccCCHHHHHHHHHHHHhCCCcEEEEEcCCC
Q 010093 316 VVYVCFGSLANFTSAQLMEIATGLEASGRNFIWVVSKNK 354 (518)
Q Consensus 316 vIyvslGS~~~~~~~~~~~l~~al~~~~~~~i~~~~~~~ 354 (518)
-||+-|.| +++.+++|+.-++..|.+++..++...
T Consensus 3 qifvvfss----dpeilkeivreikrqgvrvvllysdqd 37 (162)
T 2l82_A 3 QIFVVFSS----DPEILKEIVREIKRQGVRVVLLYSDQD 37 (162)
T ss_dssp EEEEEEES----CHHHHHHHHHHHHHTTCEEEEEECCSC
T ss_pred eEEEEecC----CHHHHHHHHHHHHhCCeEEEEEecCch
Confidence 46665544 789999999999999999998887543
No 388
>4eg0_A D-alanine--D-alanine ligase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.65A {Burkholderia ambifaria} PDB: 4egq_A 4egj_A
Probab=21.04 E-value=1.5e+02 Score=27.35 Aligned_cols=39 Identities=8% Similarity=-0.103 Sum_probs=29.4
Q ss_pred CcEEEEEcCCCcc-C---hHHHHHHHHHHHhCCCeEEEEeCCC
Q 010093 35 QLHVFFFPFMAHG-H---MIPIVDMAKLFATRGVKASVITTPA 73 (518)
Q Consensus 35 ~~kIl~~~~~~~G-H---~~p~l~LA~~L~~rGH~Vt~~~~~~ 73 (518)
++||+++..+..+ | +.-...++++|.++||+|..+.+..
T Consensus 13 ~~~v~vl~gg~s~E~~vsl~s~~~v~~al~~~g~~v~~i~~~~ 55 (317)
T 4eg0_A 13 FGKVAVLFGGESAEREVSLTSGRLVLQGLRDAGIDAHPFDPAE 55 (317)
T ss_dssp GCEEEEECCCSSTTHHHHHHHHHHHHHHHHHTTCEEEEECTTT
T ss_pred cceEEEEECCCCCcceeeHHHHHHHHHHHHHCCCEEEEEeCCC
Confidence 3688888765322 2 4467899999999999999998544
No 389
>3n0v_A Formyltetrahydrofolate deformylase; formyl transferase, ACT domain, structural genomics, joint C structural genomics, JCSG; HET: MSE; 2.25A {Pseudomonas putida}
Probab=21.00 E-value=4.8e+02 Score=23.79 Aligned_cols=107 Identities=8% Similarity=0.120 Sum_probs=0.0
Q ss_pred CCCcEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEe--CCCCccchhhhhhhhhccCCCeEEEEeeCCCccCCCCCCC
Q 010093 33 IPQLHVFFFPFMAHGHMIPIVDMAKLFATRGVKASVIT--TPANAPYVSKSVERANELGIEMDVKTIKFPSVEAGLPEGC 110 (518)
Q Consensus 33 ~~~~kIl~~~~~~~GH~~p~l~LA~~L~~rGH~Vt~~~--~~~~~~~~~~~~~~~~~~g~~i~~~~ip~~~~~~~l~~~~ 110 (518)
.+++||+++..+. ||..-.+--+..--+-..+|..+. .+......++. ++.+..+| ....
T Consensus 88 ~~~~ri~vl~Sg~-g~~l~~ll~~~~~g~l~~~i~~Visn~~~~~~~A~~~---------gIp~~~~~--------~~~~ 149 (286)
T 3n0v_A 88 NHRPKVVIMVSKA-DHCLNDLLYRQRIGQLGMDVVAVVSNHPDLEPLAHWH---------KIPYYHFA--------LDPK 149 (286)
T ss_dssp TCCCEEEEEESSC-CHHHHHHHHHHHTTSSCCEEEEEEESSSTTHHHHHHT---------TCCEEECC--------CBTT
T ss_pred CCCcEEEEEEeCC-CCCHHHHHHHHHCCCCCcEEEEEEeCcHHHHHHHHHc---------CCCEEEeC--------CCcC
Q ss_pred CccccccchhhhhhHHHHHHHHHhhHHHHHHHHhhCCCCEEEecCCCc-cHHHHHHHcCCCeEEEecc
Q 010093 111 ENLDAITNEVNKGLIVKFFGATMKLQEPLEQLLQEHKPDCLVADTFFP-WATDAAAKFGIPRLVFHGT 177 (518)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~~pDlVI~D~~~~-~~~~iA~~lgiP~v~~~~~ 177 (518)
.. ....+.+.+.+++.++|+||+-.++. ....+-..+.-.++-++++
T Consensus 150 ~r--------------------~~~~~~~~~~l~~~~~Dlivla~y~~il~~~~l~~~~~~~iNiHpS 197 (286)
T 3n0v_A 150 DK--------------------PGQERKVLQVIEETGAELVILARYMQVLSPELCRRLDGWAINIHHS 197 (286)
T ss_dssp BH--------------------HHHHHHHHHHHHHHTCSEEEESSCCSCCCHHHHHHTTTSEEEEEEC
T ss_pred CH--------------------HHHHHHHHHHHHhcCCCEEEecccccccCHHHHhhhcCCeEEeccc
No 390
>3md9_A Hemin-binding periplasmic protein HMUT; transport protein, alpha beta protein, rigid helical backbon substrate-free, heme transport; 1.50A {Yersinia pestis} PDB: 3nu1_A*
Probab=20.97 E-value=81 Score=28.05 Aligned_cols=33 Identities=15% Similarity=0.204 Sum_probs=23.2
Q ss_pred HhhCCCCEEEecCCCc--cHHHHHHHcCCCeEEEe
Q 010093 143 LQEHKPDCLVADTFFP--WATDAAAKFGIPRLVFH 175 (518)
Q Consensus 143 l~~~~pDlVI~D~~~~--~~~~iA~~lgiP~v~~~ 175 (518)
+.+.+||+||+..... ....--++.|||++.+.
T Consensus 55 i~~l~PDlIi~~~~~~~~~~~~~L~~~gipvv~~~ 89 (255)
T 3md9_A 55 ILAMKPTMLLVSELAQPSLVLTQIASSGVNVVTVP 89 (255)
T ss_dssp HHTTCCSEEEEETTCSCHHHHHHHHHTTCEEEEEC
T ss_pred HHccCCCEEEEcCCcCchhHHHHHHHcCCcEEEeC
Confidence 4568999999886543 23344467799999874
No 391
>4hkt_A Inositol 2-dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium, oxidoreductase; HET: MSE; 2.00A {Sinorhizobium meliloti}
Probab=20.95 E-value=4.8e+02 Score=23.92 Aligned_cols=109 Identities=15% Similarity=0.063 Sum_probs=61.1
Q ss_pred EEEEecCCcccCCHHHHHHHHHHHHhC-CCcEEEEEcCCCCCCCCCCCCCCChhHHHHHhcCCCcEeecCccHHHhhccC
Q 010093 316 VVYVCFGSLANFTSAQLMEIATGLEAS-GRNFIWVVSKNKNDGGEGGNEDWLPEGFEKRMEGKGLIIRGWAPQVLILDHE 394 (518)
Q Consensus 316 vIyvslGS~~~~~~~~~~~l~~al~~~-~~~~i~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~nv~~~~~~pq~~lL~~~ 394 (518)
+.+|.+|.+.. ..+.++... +..++....... + --+.+..+ -++. +-...+++..+
T Consensus 6 vgiiG~G~~g~-------~~~~~l~~~~~~~l~av~d~~~------~----~~~~~~~~---~~~~---~~~~~~~l~~~ 62 (331)
T 4hkt_A 6 FGLLGAGRIGK-------VHAKAVSGNADARLVAVADAFP------A----AAEAIAGA---YGCE---VRTIDAIEAAA 62 (331)
T ss_dssp EEEECCSHHHH-------HHHHHHHHCTTEEEEEEECSSH------H----HHHHHHHH---TTCE---ECCHHHHHHCT
T ss_pred EEEECCCHHHH-------HHHHHHhhCCCcEEEEEECCCH------H----HHHHHHHH---hCCC---cCCHHHHhcCC
Confidence 67788887652 355566665 455555544322 0 01122221 1333 45678888876
Q ss_pred CCcccccccC----chhHHHHHHhCCceec-CCc--ccccchhHHHHHHhhhcceeeccc
Q 010093 395 AVGGFVTHCG----WNSTLEAVAAGVPLVT-WPV--AAEQFYNEKMVNEILKIGVGVGIQ 447 (518)
Q Consensus 395 ~~~~~ItHgG----~~s~~eal~~GvP~l~-~P~--~~DQ~~na~~v~e~~G~G~~l~~~ 447 (518)
++++++---. .--+.+|+.+|+++++ -|+ ..++-.-...++++.|+-+.+...
T Consensus 63 ~~D~V~i~tp~~~h~~~~~~al~~gk~v~~EKP~~~~~~~~~~l~~~a~~~g~~~~v~~~ 122 (331)
T 4hkt_A 63 DIDAVVICTPTDTHADLIERFARAGKAIFCEKPIDLDAERVRACLKVVSDTKAKLMVGFN 122 (331)
T ss_dssp TCCEEEECSCGGGHHHHHHHHHHTTCEEEECSCSCSSHHHHHHHHHHHHHTTCCEEECCG
T ss_pred CCCEEEEeCCchhHHHHHHHHHHcCCcEEEecCCCCCHHHHHHHHHHHHHcCCeEEEccc
Confidence 7776664322 2357788999999887 354 334433333333677877777554
No 392
>2q37_A OHCU decarboxylase; 2-OXO-4-hydroxy-4-carboxy-5-ureidoimidazoline, plant protein, lyase; HET: 3AL; 2.50A {Arabidopsis thaliana} SCOP: a.288.1.1
Probab=20.93 E-value=2.4e+02 Score=23.88 Aligned_cols=54 Identities=11% Similarity=-0.042 Sum_probs=44.3
Q ss_pred chhHHHHHHhhhcceeeccccccccccCccChHHHHHHHHHHhcCChHHHHHHHHHHHHHHHH
Q 010093 428 FYNEKMVNEILKIGVGVGIQKWCRIVGDFVKRETIEKAVNEIMVGDRAEEMRSRAKALGKMAK 490 (518)
Q Consensus 428 ~~na~~v~e~~G~G~~l~~~~~~~~~~~~~~~~~l~~av~~ll~~~~~~~~~~~a~~l~~~~~ 490 (518)
..|+++- ++.|.=-.+-.. ..+.++|.+++.+=|.+++..+.+..+.++.++.+
T Consensus 118 ~LN~~Ye-~kFGfpFVi~v~--------G~s~~~IL~~l~~RL~N~~~~E~~~Al~Ev~kIa~ 171 (181)
T 2q37_A 118 EWNVLYK-KKFGFIFIICAS--------GRTHAEMLHALKERYENRPIVELEIAAMEQMKITE 171 (181)
T ss_dssp HHHHHHH-HHHSSCCCCCCS--------SCCHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHH-HHcCCeEEEEeC--------CCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
Confidence 4688888 588877776665 57889999999999998888888988888888876
No 393
>3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori}
Probab=20.93 E-value=1.5e+02 Score=27.80 Aligned_cols=36 Identities=14% Similarity=0.125 Sum_probs=25.6
Q ss_pred CCCcEEEEEcCCCccChHHHHHHHHHHHh--CCCeEEEEeCC
Q 010093 33 IPQLHVFFFPFMAHGHMIPIVDMAKLFAT--RGVKASVITTP 72 (518)
Q Consensus 33 ~~~~kIl~~~~~~~GH~~p~l~LA~~L~~--rGH~Vt~~~~~ 72 (518)
+++++|++. |+.| .--..|++.|++ +||+|+.+.-.
T Consensus 8 ~~~~~vlVT--GatG--~IG~~l~~~L~~~~~g~~V~~~~r~ 45 (362)
T 3sxp_A 8 LENQTILIT--GGAG--FVGSNLAFHFQENHPKAKVVVLDKF 45 (362)
T ss_dssp CTTCEEEEE--TTTS--HHHHHHHHHHHHHCTTSEEEEEECC
T ss_pred cCCCEEEEE--CCCC--HHHHHHHHHHHhhCCCCeEEEEECC
Confidence 356777766 2223 234688999999 99999998753
No 394
>3jte_A Response regulator receiver protein; structural genomics, nysgrc, response regulator receiver DOM target 11226E, PSI-2; 1.90A {Clostridium thermocellum atcc 27405}
Probab=20.85 E-value=2.8e+02 Score=21.13 Aligned_cols=47 Identities=9% Similarity=-0.041 Sum_probs=30.9
Q ss_pred hCCceecCCcccccchhHHHHHHhhhcceeeccccccccccCccChHHHHHHHHHHhc
Q 010093 414 AGVPLVTWPVAAEQFYNEKMVNEILKIGVGVGIQKWCRIVGDFVKRETIEKAVNEIMV 471 (518)
Q Consensus 414 ~GvP~l~~P~~~DQ~~na~~v~e~~G~G~~l~~~~~~~~~~~~~~~~~l~~av~~ll~ 471 (518)
..+|++++--..|. ....+.. +.|+--.+.+ -++.++|..+|++++.
T Consensus 76 ~~~~ii~ls~~~~~-~~~~~~~-~~g~~~~l~k---------p~~~~~l~~~l~~~~~ 122 (143)
T 3jte_A 76 PHMAVIILTGHGDL-DNAILAM-KEGAFEYLRK---------PVTAQDLSIAINNAIN 122 (143)
T ss_dssp TTCEEEEEECTTCH-HHHHHHH-HTTCSEEEES---------SCCHHHHHHHHHHHHH
T ss_pred CCCeEEEEECCCCH-HHHHHHH-HhCcceeEeC---------CCCHHHHHHHHHHHHH
Confidence 36777776544433 3344442 5676555554 4899999999999996
No 395
>3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus}
Probab=20.84 E-value=75 Score=27.71 Aligned_cols=34 Identities=12% Similarity=0.147 Sum_probs=23.6
Q ss_pred cEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCC
Q 010093 36 LHVFFFPFMAHGHMIPIVDMAKLFATRGVKASVITTP 72 (518)
Q Consensus 36 ~kIl~~~~~~~GH~~p~l~LA~~L~~rGH~Vt~~~~~ 72 (518)
||++++..++. .--..+|+.|+++|++|.++...
T Consensus 1 Mk~vlVTGas~---gIG~~~a~~l~~~G~~V~~~~r~ 34 (230)
T 3guy_A 1 MSLIVITGASS---GLGAELAKLYDAEGKATYLTGRS 34 (230)
T ss_dssp --CEEEESTTS---HHHHHHHHHHHHTTCCEEEEESC
T ss_pred CCEEEEecCCc---hHHHHHHHHHHHCCCEEEEEeCC
Confidence 35556665543 24578999999999999888653
No 396
>3jvi_A Protein tyrosine phosphatase; niaid, ssgcid, seattle structural genomics center for infect disease, parasitic protozoan, dysentery; 1.80A {Entamoeba histolytica} PDB: 3js5_A* 3ily_A 3ido_A*
Probab=20.84 E-value=74 Score=26.39 Aligned_cols=31 Identities=6% Similarity=-0.045 Sum_probs=20.6
Q ss_pred CCCcEEEEEcCCCccChHHHHHHHHHHHh-CC
Q 010093 33 IPQLHVFFFPFMAHGHMIPIVDMAKLFAT-RG 63 (518)
Q Consensus 33 ~~~~kIl~~~~~~~GH~~p~l~LA~~L~~-rG 63 (518)
++|+||||+|.+-..---..-.|++.+.. +|
T Consensus 2 ~~m~~vLFVC~gN~cRSpmAE~~~~~~~~~~g 33 (161)
T 3jvi_A 2 PGSMKLLFVCLGNICRSPAAEAVMKKVIQNHH 33 (161)
T ss_dssp --CEEEEEEESSSSSHHHHHHHHHHHHHHHTT
T ss_pred CCCcEEEEECCCchhHHHHHHHHHHHHHHHcC
Confidence 36889999999855554555667777764 44
No 397
>3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum}
Probab=20.77 E-value=92 Score=27.65 Aligned_cols=36 Identities=8% Similarity=-0.021 Sum_probs=25.6
Q ss_pred CCcEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCC
Q 010093 34 PQLHVFFFPFMAHGHMIPIVDMAKLFATRGVKASVITTP 72 (518)
Q Consensus 34 ~~~kIl~~~~~~~GH~~p~l~LA~~L~~rGH~Vt~~~~~ 72 (518)
.|.|.+++..++.| --..||+.|+++|++|.++.-.
T Consensus 20 ~m~k~vlITGas~g---IG~~la~~l~~~G~~V~~~~r~ 55 (251)
T 3orf_A 20 HMSKNILVLGGSGA---LGAEVVKFFKSKSWNTISIDFR 55 (251)
T ss_dssp --CCEEEEETTTSH---HHHHHHHHHHHTTCEEEEEESS
T ss_pred ccCCEEEEECCCCH---HHHHHHHHHHHCCCEEEEEeCC
Confidence 34466677665532 4578999999999999888754
No 398
>4ggj_A Mitochondrial cardiolipin hydrolase; piRNA pathway, protein-RNA interactions, piRNA RNAI, HKD MOT zinc finger, nuclease, nucleic acid binding; 1.75A {Mus musculus} PDB: 4ggk_A
Probab=20.67 E-value=2e+02 Score=24.51 Aligned_cols=55 Identities=25% Similarity=0.381 Sum_probs=31.0
Q ss_pred eEEEcCCCcchHHhhhhccCCCCCCCcEEEEEcCCCccChHHHHHHHHHH---HhCCCeEEEEeCCC
Q 010093 10 KVAFTNNSSLSSYLIRKLNMGSEIPQLHVFFFPFMAHGHMIPIVDMAKLF---ATRGVKASVITTPA 73 (518)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~m~~~~~~~kIl~~~~~~~GH~~p~l~LA~~L---~~rGH~Vt~~~~~~ 73 (518)
.+.|+++-+.-.-++..|.-+. +..+|.++.+. + -.|+++| ++||.+|.++....
T Consensus 38 ~~~~~~~~~~~~~ll~~I~~A~--~sI~i~~y~~~---~----~~i~~aL~~aa~rGV~Vrii~D~~ 95 (196)
T 4ggj_A 38 PCSLPHSESSLSRLLRALLAAR--SSLELCLFAFS---S----PQLGRAVQLLHQRGVRVRVITDCD 95 (196)
T ss_dssp CCSSCCSCCHHHHHHHHHHTCS--SEEEEEESCBC---C----HHHHHHHHHHHHTTCEEEEEESSC
T ss_pred eeecCCcHHHHHHHHHHHHHhh--eEEEEEEEEeC---C----HHHHHHHHHHHHcCCcEEEEEecc
Confidence 3445665544444555666564 44455443332 2 1344444 56899999998654
No 399
>1o4v_A Phosphoribosylaminoimidazole mutase PURE; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; 1.77A {Thermotoga maritima} SCOP: c.23.8.1
Probab=20.62 E-value=3.9e+02 Score=22.59 Aligned_cols=142 Identities=13% Similarity=0.198 Sum_probs=78.4
Q ss_pred CcEEEEecCCcccCCHHHHHHHHHHHHhCCCcEEEEEcC-CCCCCCCCCCCCCChhHHHHHhcCCCcEeecCccHHHhhc
Q 010093 314 YSVVYVCFGSLANFTSAQLMEIATGLEASGRNFIWVVSK-NKNDGGEGGNEDWLPEGFEKRMEGKGLIIRGWAPQVLILD 392 (518)
Q Consensus 314 ~~vIyvslGS~~~~~~~~~~~l~~al~~~~~~~i~~~~~-~~~~~~~~~~~~~lp~~~~~~~~~~nv~~~~~~pq~~lL~ 392 (518)
-|.|-|-.||.+ +-....+....++.++..+=..+-+ .. .|+.+....+ + ..
T Consensus 13 ~~~V~IimGS~S--D~~v~~~a~~~L~~~Gi~~dv~V~SaHR-----------~p~~l~~~~~-----------~---a~ 65 (183)
T 1o4v_A 13 VPRVGIIMGSDS--DLPVMKQAAEILEEFGIDYEITIVSAHR-----------TPDRMFEYAK-----------N---AE 65 (183)
T ss_dssp -CEEEEEESCGG--GHHHHHHHHHHHHHTTCEEEEEECCTTT-----------CHHHHHHHHH-----------H---TT
T ss_pred CCeEEEEeccHH--HHHHHHHHHHHHHHcCCCeEEEEEcccC-----------CHHHHHHHHH-----------H---HH
Confidence 346777778765 5667777888888888876444433 22 5554332110 0 00
Q ss_pred cCCCcccccccCc----hhHHHHHHhCCceecCCccccc-c-hhH-HHHHHhh--hcceee-ccccccccccCccChHHH
Q 010093 393 HEAVGGFVTHCGW----NSTLEAVAAGVPLVTWPVAAEQ-F-YNE-KMVNEIL--KIGVGV-GIQKWCRIVGDFVKRETI 462 (518)
Q Consensus 393 ~~~~~~~ItHgG~----~s~~eal~~GvP~l~~P~~~DQ-~-~na-~~v~e~~--G~G~~l-~~~~~~~~~~~~~~~~~l 462 (518)
...++.+|.=+|. .++..++ .-+|+|.+|....- . ..+ .-++ +. |+.+.. ... +.+++.-+
T Consensus 66 ~~g~~ViIa~AG~aa~LpgvvA~~-t~~PVIgVP~~~~~l~G~dsLlSiv-qmP~GvpVatV~Id-------~~~nAa~l 136 (183)
T 1o4v_A 66 ERGIEVIIAGAGGAAHLPGMVASI-THLPVIGVPVKTSTLNGLDSLFSIV-QMPGGVPVATVAIN-------NAKNAGIL 136 (183)
T ss_dssp TTTCCEEEEEEESSCCHHHHHHHH-CSSCEEEEEECCTTTTTHHHHHHHH-TCCTTCCCEECCTT-------CHHHHHHH
T ss_pred hCCCcEEEEecCcccccHHHHHhc-cCCCEEEeeCCCCCCCcHHHHHHHh-cCCCCCeeEEEecC-------CchHHHHH
Confidence 0113346665553 3444443 67899999974421 1 112 1232 44 544332 222 24555555
Q ss_pred HHHHHHHhcCChHHHHHHHHHHHHHHHHHHHhc
Q 010093 463 EKAVNEIMVGDRAEEMRSRAKALGKMAKRAVEN 495 (518)
Q Consensus 463 ~~av~~ll~~~~~~~~~~~a~~l~~~~~~~~~~ 495 (518)
...|.. +. |+.++++.+..++..++.+.+
T Consensus 137 AaqIla-~~---d~~l~~kL~~~r~~~~~~v~~ 165 (183)
T 1o4v_A 137 AASILG-IK---YPEIARKVKEYKERMKREVLE 165 (183)
T ss_dssp HHHHHH-TT---CHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHh-cC---CHHHHHHHHHHHHHHHHHHHH
Confidence 554443 23 669999999999988866655
No 400
>1kjq_A GART 2, phosphoribosylglycinamide formyltransferase 2, 5'-; ATP-grAsp, purine biosynthesis, nucleotide; HET: ADP MPO; 1.05A {Escherichia coli} SCOP: b.84.2.1 c.30.1.1 d.142.1.2 PDB: 1kj9_A* 1kji_A* 1kjj_A* 1kj8_A* 1eyz_A* 1ez1_A*
Probab=20.60 E-value=1.5e+02 Score=28.32 Aligned_cols=39 Identities=13% Similarity=0.014 Sum_probs=28.5
Q ss_pred cCCCCCCCcEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCCC
Q 010093 28 NMGSEIPQLHVFFFPFMAHGHMIPIVDMAKLFATRGVKASVITTPA 73 (518)
Q Consensus 28 ~m~~~~~~~kIl~~~~~~~GH~~p~l~LA~~L~~rGH~Vt~~~~~~ 73 (518)
+|.. +++||+++-.+ .....+++++.+.||+|..+....
T Consensus 6 pm~~--~~~~ili~g~g-----~~~~~~~~a~~~~G~~v~~~~~~~ 44 (391)
T 1kjq_A 6 ALRP--AATRVMLLGSG-----ELGKEVAIECQRLGVEVIAVDRYA 44 (391)
T ss_dssp TTST--TCCEEEEESCS-----HHHHHHHHHHHTTTCEEEEEESST
T ss_pred CCCC--CCCEEEEECCC-----HHHHHHHHHHHHcCCEEEEEECCC
Confidence 3554 56899998443 235778999999999998887643
No 401
>1ys7_A Transcriptional regulatory protein PRRA; response regulator, DNA binding domain, phosphorylation; 1.58A {Mycobacterium tuberculosis} SCOP: a.4.6.1 c.23.1.1 PDB: 1ys6_A
Probab=20.59 E-value=1.4e+02 Score=25.64 Aligned_cols=37 Identities=22% Similarity=0.404 Sum_probs=24.3
Q ss_pred HHHhhCCCCEEEecCCCc--cHHHHHHHc-----CCCeEEEecc
Q 010093 141 QLLQEHKPDCLVADTFFP--WATDAAAKF-----GIPRLVFHGT 177 (518)
Q Consensus 141 ~ll~~~~pDlVI~D~~~~--~~~~iA~~l-----giP~v~~~~~ 177 (518)
+.+...+||+||.|..++ .+..+.+.+ ++|++.++..
T Consensus 45 ~~~~~~~~dlvllD~~l~~~~g~~~~~~l~~~~~~~~ii~lt~~ 88 (233)
T 1ys7_A 45 RSATENRPDAIVLDINMPVLDGVSVVTALRAMDNDVPVCVLSAR 88 (233)
T ss_dssp HHHHHSCCSEEEEESSCSSSCHHHHHHHHHHTTCCCCEEEEECC
T ss_pred HHHHhCCCCEEEEeCCCCCCCHHHHHHHHHhcCCCCCEEEEEcC
Confidence 344567899999997655 354444433 6888877653
No 402
>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti}
Probab=20.47 E-value=2.3e+02 Score=25.32 Aligned_cols=33 Identities=15% Similarity=0.023 Sum_probs=25.1
Q ss_pred EEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCC
Q 010093 37 HVFFFPFMAHGHMIPIVDMAKLFATRGVKASVITTP 72 (518)
Q Consensus 37 kIl~~~~~~~GH~~p~l~LA~~L~~rGH~Vt~~~~~ 72 (518)
|++++..++. ---..+|+.|+++|++|.++...
T Consensus 32 k~~lVTGas~---GIG~aia~~la~~G~~V~~~~~~ 64 (271)
T 3v2g_A 32 KTAFVTGGSR---GIGAAIAKRLALEGAAVALTYVN 64 (271)
T ss_dssp CEEEEETTTS---HHHHHHHHHHHHTTCEEEEEESS
T ss_pred CEEEEeCCCc---HHHHHHHHHHHHCCCEEEEEeCC
Confidence 6677776654 24578999999999999888553
No 403
>3to5_A CHEY homolog; alpha(5)beta(5), chemotaxis, FLIM, phosphorylation, motor AC signaling protein; 1.65A {Vibrio cholerae}
Probab=20.41 E-value=3.2e+02 Score=21.49 Aligned_cols=108 Identities=9% Similarity=0.048 Sum_probs=64.1
Q ss_pred cCCHHHHHHHHHHHHhCCCcEEEEEcCCCCCCCCCCCCCCChhHHHH-HhcCCCcEeecCccHHHhhccCCCcccccccC
Q 010093 326 NFTSAQLMEIATGLEASGRNFIWVVSKNKNDGGEGGNEDWLPEGFEK-RMEGKGLIIRGWAPQVLILDHEAVGGFVTHCG 404 (518)
Q Consensus 326 ~~~~~~~~~l~~al~~~~~~~i~~~~~~~~~~~~~~~~~~lp~~~~~-~~~~~nv~~~~~~pq~~lL~~~~~~~~ItHgG 404 (518)
-.++.....+...++..|+.++.....+. +.+.. +..+..+++.+|- -|.+ .
T Consensus 19 DD~~~~r~~l~~~L~~~G~~~v~~a~~g~-------------~al~~~~~~~~DlillD~~-------MP~m-------d 71 (134)
T 3to5_A 19 DDFSTMRRIVKNLLRDLGFNNTQEADDGL-------------TALPMLKKGDFDFVVTDWN-------MPGM-------Q 71 (134)
T ss_dssp CSCHHHHHHHHHHHHHTTCCCEEEESSHH-------------HHHHHHHHHCCSEEEEESC-------CSSS-------C
T ss_pred eCCHHHHHHHHHHHHHcCCcEEEEECCHH-------------HHHHHHHhCCCCEEEEcCC-------CCCC-------C
Confidence 44566666677888888987655443322 12211 1224566666651 1222 1
Q ss_pred chhHHHHHH-----hCCceecCCcccccchhHHHHHHhhhcceeeccccccccccCccChHHHHHHHHHHhc
Q 010093 405 WNSTLEAVA-----AGVPLVTWPVAAEQFYNEKMVNEILKIGVGVGIQKWCRIVGDFVKRETIEKAVNEIMV 471 (518)
Q Consensus 405 ~~s~~eal~-----~GvP~l~~P~~~DQ~~na~~v~e~~G~G~~l~~~~~~~~~~~~~~~~~l~~av~~ll~ 471 (518)
.-.+.+.+. ..+|+|++-...+.. ...+. .+.|+--.+.+ -++.++|.++|+++++
T Consensus 72 G~el~~~ir~~~~~~~ipvI~lTa~~~~~-~~~~~-~~~Ga~~yl~K---------P~~~~~L~~~i~~~l~ 132 (134)
T 3to5_A 72 GIDLLKNIRADEELKHLPVLMITAEAKRE-QIIEA-AQAGVNGYIVK---------PFTAATLKEKLDKIFE 132 (134)
T ss_dssp HHHHHHHHHHSTTTTTCCEEEEESSCCHH-HHHHH-HHTTCCEEEES---------SCCHHHHHHHHHHHCC
T ss_pred HHHHHHHHHhCCCCCCCeEEEEECCCCHH-HHHHH-HHCCCCEEEEC---------CCCHHHHHHHHHHHHh
Confidence 123444443 468888887666554 34445 36787777765 3899999999999985
No 404
>2zay_A Response regulator receiver protein; structural genomics, NYSGXRC, target 11006U, protein structure initiative; 2.00A {Desulfuromonas acetoxidans}
Probab=20.37 E-value=1e+02 Score=24.08 Aligned_cols=39 Identities=15% Similarity=0.310 Sum_probs=24.8
Q ss_pred HHHHHhhCCCCEEEecCCCc--cHHHHHHH-------cCCCeEEEecc
Q 010093 139 LEQLLQEHKPDCLVADTFFP--WATDAAAK-------FGIPRLVFHGT 177 (518)
Q Consensus 139 l~~ll~~~~pDlVI~D~~~~--~~~~iA~~-------lgiP~v~~~~~ 177 (518)
..+.++..+||+||+|.... .+..+.+. .++|++.++..
T Consensus 44 a~~~l~~~~~dlii~d~~l~~~~g~~~~~~l~~~~~~~~~pii~ls~~ 91 (147)
T 2zay_A 44 AVPVAVKTHPHLIITEANMPKISGMDLFNSLKKNPQTASIPVIALSGR 91 (147)
T ss_dssp HHHHHHHHCCSEEEEESCCSSSCHHHHHHHHHTSTTTTTSCEEEEESS
T ss_pred HHHHHHcCCCCEEEEcCCCCCCCHHHHHHHHHcCcccCCCCEEEEeCC
Confidence 33445556899999997554 34444433 35788887664
No 405
>2qv5_A AGR_C_5032P, uncharacterized protein ATU2773; structural genomics, unknown function, PSI-2, protein struct initiative; 1.90A {Agrobacterium tumefaciens str}
Probab=20.37 E-value=2.4e+02 Score=25.48 Aligned_cols=35 Identities=17% Similarity=0.143 Sum_probs=26.4
Q ss_pred HHHHHHHhhCCCCEEEecCCC---ccHHHHHHHcCCCeEE
Q 010093 137 EPLEQLLQEHKPDCLVADTFF---PWATDAAAKFGIPRLV 173 (518)
Q Consensus 137 ~~l~~ll~~~~pDlVI~D~~~---~~~~~iA~~lgiP~v~ 173 (518)
+.+.+.+++ -.+++.|..+ ..+..+|.++|+|++.
T Consensus 145 ~~vm~~L~~--~gL~FlDS~Ts~~S~a~~~A~~~gvp~~~ 182 (261)
T 2qv5_A 145 EPVMRDIGK--RGLLFLDDGSSAQSLSGGIAKAISAPQGF 182 (261)
T ss_dssp HHHHHHHHH--TTCEEEECSCCTTCCHHHHHHHHTCCEEE
T ss_pred HHHHHHHHH--CCCEEEcCCCCcccHHHHHHHHcCCCeEE
Confidence 344444554 3799999877 3689999999999987
No 406
>3cg4_A Response regulator receiver domain protein (CHEY-; structural genomics, unknown function; HET: MSE; 1.61A {Methanospirillum hungatei jf-1}
Probab=20.33 E-value=1.6e+02 Score=22.66 Aligned_cols=34 Identities=6% Similarity=0.091 Sum_probs=24.8
Q ss_pred CCcEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeC
Q 010093 34 PQLHVFFFPFMAHGHMIPIVDMAKLFATRGVKASVITT 71 (518)
Q Consensus 34 ~~~kIl~~~~~~~GH~~p~l~LA~~L~~rGH~Vt~~~~ 71 (518)
++++|+++- .+-.-...|.+.|...|++|..+..
T Consensus 6 ~~~~iLivd----d~~~~~~~l~~~L~~~g~~v~~~~~ 39 (142)
T 3cg4_A 6 HKGDVMIVD----DDAHVRIAVKTILSDAGFHIISADS 39 (142)
T ss_dssp CCCEEEEEC----SCHHHHHHHHHHHHHTTCEEEEESS
T ss_pred CCCeEEEEc----CCHHHHHHHHHHHHHCCeEEEEeCC
Confidence 678898875 4556667788888888998765544
No 407
>1i3c_A Response regulator RCP1; phytochrome, signaling protein; 1.90A {Synechocystis SP} SCOP: c.23.1.1 PDB: 1jlk_A
Probab=20.33 E-value=1.7e+02 Score=22.85 Aligned_cols=33 Identities=21% Similarity=0.407 Sum_probs=22.3
Q ss_pred CCCCEEEecCCCc--cHHHHHHHc-------CCCeEEEecch
Q 010093 146 HKPDCLVADTFFP--WATDAAAKF-------GIPRLVFHGTS 178 (518)
Q Consensus 146 ~~pDlVI~D~~~~--~~~~iA~~l-------giP~v~~~~~~ 178 (518)
.+||+||.|..++ .+..+.+.+ ++|++.++...
T Consensus 60 ~~~dlillD~~lp~~~g~~l~~~l~~~~~~~~~piiils~~~ 101 (149)
T 1i3c_A 60 PRPNLILLDLNLPKKDGREVLAEIKQNPDLKRIPVVVLTTSH 101 (149)
T ss_dssp CCCSEEEECSCCSSSCHHHHHHHHHHCTTTTTSCEEEEESCC
T ss_pred CCCCEEEEeCCCCCCcHHHHHHHHHhCcCcCCCeEEEEECCC
Confidence 5799999997665 355444433 57888876643
No 408
>3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV}
Probab=20.32 E-value=81 Score=28.32 Aligned_cols=34 Identities=6% Similarity=-0.035 Sum_probs=25.6
Q ss_pred EEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCCC
Q 010093 37 HVFFFPFMAHGHMIPIVDMAKLFATRGVKASVITTPA 73 (518)
Q Consensus 37 kIl~~~~~~~GH~~p~l~LA~~L~~rGH~Vt~~~~~~ 73 (518)
|++++..++.| --..+|+.|+++|++|.++.-..
T Consensus 28 k~vlVTGas~g---IG~aia~~l~~~G~~V~~~~r~~ 61 (260)
T 3gem_A 28 APILITGASQR---VGLHCALRLLEHGHRVIISYRTE 61 (260)
T ss_dssp CCEEESSTTSH---HHHHHHHHHHHTTCCEEEEESSC
T ss_pred CEEEEECCCCH---HHHHHHHHHHHCCCEEEEEeCCh
Confidence 56666665543 45789999999999999887643
No 409
>2jk1_A HUPR, hydrogenase transcriptional regulatory protein HU; nucleotide-binding, transcription regulation; 2.10A {Rhodobacter capsulatus} PDB: 2vui_B 2vuh_B
Probab=20.26 E-value=2.6e+02 Score=21.36 Aligned_cols=47 Identities=4% Similarity=-0.190 Sum_probs=27.7
Q ss_pred CCceecCCcccccchhHHHHHHhhhcceeeccccccccccCccChHHHHHHHHHHhc
Q 010093 415 GVPLVTWPVAAEQFYNEKMVNEILKIGVGVGIQKWCRIVGDFVKRETIEKAVNEIMV 471 (518)
Q Consensus 415 GvP~l~~P~~~DQ~~na~~v~e~~G~G~~l~~~~~~~~~~~~~~~~~l~~av~~ll~ 471 (518)
..|++++--..|.......+ +..|+--.+.+ -++.++|..+|++++.
T Consensus 72 ~~~ii~~s~~~~~~~~~~~~-~~~ga~~~l~K---------P~~~~~L~~~i~~~~~ 118 (139)
T 2jk1_A 72 ETVRIIITGYTDSASMMAAI-NDAGIHQFLTK---------PWHPEQLLSSARNAAR 118 (139)
T ss_dssp TSEEEEEESCTTCHHHHHHH-HHTTCCEEEES---------SCCHHHHHHHHHHHHH
T ss_pred CCcEEEEeCCCChHHHHHHH-HhhchhhhccC---------CCCHHHHHHHHHHHHH
Confidence 56776664444433333333 22344334433 4799999999999996
No 410
>2x7j_A 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene -1-carboxylate synthase; transferase, metal-binding; HET: TPP; 2.35A {Bacillus subtilis}
Probab=20.25 E-value=2.2e+02 Score=29.27 Aligned_cols=79 Identities=11% Similarity=0.031 Sum_probs=45.8
Q ss_pred HHHHHHHHHHhCCCcEEEEEcCCCCCCCCCCCCCCCh--hHHHHHhcCCCcEeecCcc-HHHh-------hccCCCcccc
Q 010093 331 QLMEIATGLEASGRNFIWVVSKNKNDGGEGGNEDWLP--EGFEKRMEGKGLIIRGWAP-QVLI-------LDHEAVGGFV 400 (518)
Q Consensus 331 ~~~~l~~al~~~~~~~i~~~~~~~~~~~~~~~~~~lp--~~~~~~~~~~nv~~~~~~p-q~~l-------L~~~~~~~~I 400 (518)
.-+.+++.|++.|.+.|..+++.. .+| +.+. +.+.+..+.-.- |... .......+++
T Consensus 33 ~a~~lv~~L~~~GV~~vFg~PG~~----------~~~l~dal~---~~~~i~~i~~~hE~~Aa~aA~GyAr~tgkpgv~~ 99 (604)
T 2x7j_A 33 YIGSFIDEFALSGITDAVVCPGSR----------STPLAVLCA---AHPDISVHVQIDERSAGFFALGLAKAKQRPVLLI 99 (604)
T ss_dssp HHHHHHHHHHHHTCCEEEECCCST----------THHHHHHHH---HCTTCEEEECSSHHHHHHHHHHHHHHHTSCEEEE
T ss_pred HHHHHHHHHHHcCCCEEEECcCcc----------cHHHHHHHH---hCCCceEEEecChHHHHHHHHHHHHhhCCCEEEE
Confidence 345577777778887777776654 132 2221 122344322211 2111 1113344588
Q ss_pred cccCc------hhHHHHHHhCCceecCC
Q 010093 401 THCGW------NSTLEAVAAGVPLVTWP 422 (518)
Q Consensus 401 tHgG~------~s~~eal~~GvP~l~~P 422 (518)
+|.|- +.+.||-+.++|+|++-
T Consensus 100 ~TsGpG~~N~~~gia~A~~~~vPlv~It 127 (604)
T 2x7j_A 100 CTSGTAAANFYPAVVEAHYSRVPIIVLT 127 (604)
T ss_dssp ECSSHHHHTTHHHHHHHHHHTCCEEEEE
T ss_pred ECChhHHHHHHHHHHHHhhcCCCEEEEe
Confidence 88886 57889999999999874
No 411
>2z04_A Phosphoribosylaminoimidazole carboxylase ATPase subunit; purine nucleotide biosynthetic pathway, structural genomics, NPPSFA; 2.35A {Aquifex aeolicus}
Probab=20.15 E-value=1.1e+02 Score=28.97 Aligned_cols=34 Identities=15% Similarity=-0.213 Sum_probs=25.7
Q ss_pred CcEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCCC
Q 010093 35 QLHVFFFPFMAHGHMIPIVDMAKLFATRGVKASVITTPA 73 (518)
Q Consensus 35 ~~kIl~~~~~~~GH~~p~l~LA~~L~~rGH~Vt~~~~~~ 73 (518)
|.||+++..+ .....++++|.+.||+|.++.+..
T Consensus 1 M~~Ililg~g-----~~~~~~~~a~~~~G~~v~~~~~~~ 34 (365)
T 2z04_A 1 MLTVGILGGG-----QLGWMTILEGRKLGFKFHVLEDKE 34 (365)
T ss_dssp -CEEEEECCS-----HHHHHHHHHHGGGTCEEEEECSSS
T ss_pred CCEEEEECCC-----HHHHHHHHHHHHCCCEEEEEeCCC
Confidence 3578888543 446788999999999999887653
No 412
>1xgk_A Nitrogen metabolite repression regulator NMRA; rossmann fold, transcriptional regulation, short chain dehyd reductase, NADP binding; 1.40A {Emericella nidulans} SCOP: c.2.1.2 PDB: 1k6x_A* 1k6j_A 1k6i_A* 1ti7_A* 2vus_A 2vut_A* 2vuu_A*
Probab=20.09 E-value=92 Score=29.48 Aligned_cols=35 Identities=11% Similarity=0.082 Sum_probs=24.6
Q ss_pred CcEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCCC
Q 010093 35 QLHVFFFPFMAHGHMIPIVDMAKLFATRGVKASVITTPA 73 (518)
Q Consensus 35 ~~kIl~~~~~~~GH~~p~l~LA~~L~~rGH~Vt~~~~~~ 73 (518)
+++|++. ++.|.+ -..|++.|+++||+|+.++-..
T Consensus 5 ~~~ilVt--GatG~i--G~~l~~~L~~~g~~V~~~~R~~ 39 (352)
T 1xgk_A 5 KKTIAVV--GATGRQ--GASLIRVAAAVGHHVRAQVHSL 39 (352)
T ss_dssp CCCEEEE--STTSHH--HHHHHHHHHHTTCCEEEEESCS
T ss_pred CCEEEEE--CCCCHH--HHHHHHHHHhCCCEEEEEECCC
Confidence 3566654 444544 4678899999999999987543
No 413
>3lyu_A Putative hydrogenase; the C-terminal has AN alpha-beta fold, structural genomics, PSI-2, protein structure initiative; 2.30A {Pyrococcus furiosus}
Probab=20.04 E-value=85 Score=25.21 Aligned_cols=32 Identities=9% Similarity=0.196 Sum_probs=27.5
Q ss_pred cEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEE
Q 010093 36 LHVFFFPFMAHGHMIPIVDMAKLFATRGVKASVI 69 (518)
Q Consensus 36 ~kIl~~~~~~~GH~~p~l~LA~~L~~rGH~Vt~~ 69 (518)
-+++++..+. =+.|++++++.|.++|.+|+++
T Consensus 19 ~~~llIaGG~--GiaPl~sm~~~l~~~~~~v~l~ 50 (142)
T 3lyu_A 19 GKILAIGAYT--GIVEVYPIAKAWQEIGNDVTTL 50 (142)
T ss_dssp SEEEEEEETT--HHHHHHHHHHHHHHTTCEEEEE
T ss_pred CeEEEEECcC--cHHHHHHHHHHHHhcCCcEEEE
Confidence 4788877664 4899999999999999999998
No 414
>2pk3_A GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, short-chain dehydrogenase/reductase, rossmann fold, oxidoreductase; HET: A2R GDD; 1.82A {Aneurinibacillus thermoaerophilus}
Probab=20.04 E-value=99 Score=28.38 Aligned_cols=35 Identities=9% Similarity=0.047 Sum_probs=23.3
Q ss_pred CCcEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCC
Q 010093 34 PQLHVFFFPFMAHGHMIPIVDMAKLFATRGVKASVITTP 72 (518)
Q Consensus 34 ~~~kIl~~~~~~~GH~~p~l~LA~~L~~rGH~Vt~~~~~ 72 (518)
++++|++. ++.|-+ -..|++.|+++||+|+.+.-.
T Consensus 11 ~~~~vlVT--GatG~i--G~~l~~~L~~~G~~V~~~~r~ 45 (321)
T 2pk3_A 11 GSMRALIT--GVAGFV--GKYLANHLTEQNVEVFGTSRN 45 (321)
T ss_dssp --CEEEEE--TTTSHH--HHHHHHHHHHTTCEEEEEESC
T ss_pred CcceEEEE--CCCChH--HHHHHHHHHHCCCEEEEEecC
Confidence 44555544 333433 467899999999999988754
No 415
>4h3k_B RNA polymerase II subunit A C-terminal domain PHO SSU72; heat repeat, phosphatase, RNA polymerase II, hydrolase; HET: SEP; 2.00A {Homo sapiens} PDB: 3o2q_B* 4h3h_B* 3o2s_B
Probab=20.00 E-value=4.3e+02 Score=22.83 Aligned_cols=37 Identities=14% Similarity=0.184 Sum_probs=28.9
Q ss_pred CCcEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCCC
Q 010093 34 PQLHVFFFPFMAHGHMIPIVDMAKLFATRGVKASVITTPA 73 (518)
Q Consensus 34 ~~~kIl~~~~~~~GH~~p~l~LA~~L~~rGH~Vt~~~~~~ 73 (518)
..+|+.+++. +..|.-..-=..|.++|++|.-+++..
T Consensus 24 ~~Lr~avVCa---SN~NRSMEAH~~L~k~Gf~V~SfGTGs 60 (214)
T 4h3k_B 24 SPLRVAVVSS---SNQNRSMEAHNILSKRGFSVRSFGTGT 60 (214)
T ss_dssp --CEEEEEES---SSSSHHHHHHHHHHHTTCEEEEEECSS
T ss_pred CCCeEEEECC---CCcchhHHHHHHHHHCCCceEeecCCC
Confidence 4688887774 677888888888999999999888853
Done!