Query 010094
Match_columns 518
No_of_seqs 229 out of 1647
Neff 6.0
Searched_HMMs 29240
Date Mon Mar 25 19:46:20 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/010094.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/010094hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1un8_A Dihydroxyacetone kinase 100.0 3E-142 1E-146 1150.9 44.0 470 1-512 73-551 (552)
2 3ct4_A PTS-dependent dihydroxy 100.0 1E-102 3E-107 794.2 26.6 261 1-266 70-332 (332)
3 1oi2_A Hypothetical protein YC 100.0 1E-102 4E-107 797.1 24.4 267 1-268 78-365 (366)
4 2iu4_A DHA-DHAQ, dihydroxyacet 100.0 9E-103 3E-107 794.6 23.0 262 1-267 66-330 (336)
5 3pnl_B PTS-dependent dihydroxy 100.0 1.5E-53 5E-58 414.1 22.2 207 302-512 4-210 (211)
6 3cr3_A PTS-dependent dihydroxy 100.0 1.9E-50 6.4E-55 386.9 19.1 189 303-511 3-191 (192)
7 3nyi_A FAT acid-binding protei 74.4 11 0.00039 37.4 9.3 94 13-120 67-165 (297)
8 3fdj_A DEGV family protein; GU 73.1 15 0.00051 36.2 9.6 205 13-246 62-276 (278)
9 3pl5_A SMU_165, putative uncha 72.9 11 0.00038 38.0 8.8 199 13-240 98-308 (320)
10 3jr7_A Uncharacterized EGV fam 71.5 12 0.00041 37.3 8.6 195 13-235 82-287 (298)
11 2dt8_A DEGV family protein; fa 56.2 33 0.0011 33.6 8.4 93 12-121 62-157 (280)
12 1pzx_A Hypothetical protein AP 54.7 41 0.0014 33.1 8.8 97 12-122 63-164 (289)
13 3ct6_A PTS-dependent dihydroxy 48.1 29 0.00098 30.3 5.7 79 15-119 45-125 (131)
14 2bz1_A GTP cyclohydrolase II; 46.8 9.1 0.00031 36.1 2.4 56 4-59 53-143 (196)
15 3b48_A Uncharacterized protein 40.4 55 0.0019 28.4 6.4 77 15-113 50-129 (135)
16 3djh_A Macrophage migration in 40.0 18 0.00063 30.3 3.1 40 190-229 57-96 (114)
17 3b64_A Macrophage migration in 37.9 24 0.00081 29.3 3.5 42 189-230 57-98 (112)
18 1uiz_A MIF, macrophage migrati 37.3 24 0.00084 29.3 3.5 41 189-229 57-97 (115)
19 3fwu_A Macrophage migration in 36.6 22 0.00074 31.0 3.1 41 190-230 79-119 (133)
20 4dh4_A MIF; trimer, isomerase; 36.3 19 0.00065 30.1 2.6 40 190-229 58-97 (114)
21 1mgp_A Hypothetical protein TM 35.9 1.3E+02 0.0045 30.0 9.1 93 12-121 89-187 (313)
22 3fys_A Protein DEGV; fatty aci 35.7 1.5E+02 0.0051 29.5 9.5 93 12-120 96-192 (315)
23 2os5_A Acemif; macrophage migr 34.6 32 0.0011 28.8 3.8 42 188-229 56-97 (119)
24 1hfo_A Migration inhibitory fa 34.2 26 0.00087 29.1 3.0 40 190-229 57-96 (113)
25 3lup_A DEGV family protein; PS 32.2 1.2E+02 0.004 29.7 8.0 195 12-246 65-282 (285)
26 2xcz_A Possible ATLS1-like lig 31.0 29 0.00099 28.8 2.9 41 189-229 57-97 (115)
27 3fwt_A Macrophage migration in 30.6 23 0.00077 30.9 2.2 41 190-230 79-119 (133)
28 2lnd_A De novo designed protei 29.4 83 0.0028 25.6 5.1 51 149-212 23-73 (112)
29 3t5s_A Gilaa.00834.A, macropha 28.8 21 0.00073 31.2 1.7 41 189-229 78-118 (135)
30 2wkb_A Macrophage migration in 26.8 30 0.001 29.4 2.3 41 189-229 57-97 (125)
31 2yxd_A Probable cobalt-precorr 23.3 2E+02 0.007 24.2 7.2 56 3-66 102-157 (183)
32 4fbl_A LIPS lipolytic enzyme; 22.7 85 0.0029 29.3 4.8 32 188-225 51-82 (281)
33 2aal_A Malonate semialdehyde d 21.6 66 0.0023 27.3 3.5 39 190-229 67-105 (131)
34 3pnl_B PTS-dependent dihydroxy 20.9 5.1E+02 0.017 24.1 11.5 115 357-474 35-152 (211)
35 3ihu_A Transcriptional regulat 20.1 1.4E+02 0.0048 27.4 5.7 64 161-237 16-83 (222)
No 1
>1un8_A Dihydroxyacetone kinase; transferase; HET: MYY; 2.5A {Citrobacter freundii} SCOP: a.208.1.1 c.119.1.2 PDB: 1un9_A*
Probab=100.00 E-value=3.3e-142 Score=1150.95 Aligned_cols=470 Identities=44% Similarity=0.657 Sum_probs=422.1
Q ss_pred CccccccCCCCCCCCHHHHHHHHHhccCCCCeEEEeeccccccccHHHHHHHHHhcCCcEEEEEecccccCCCCCCCCCc
Q 010094 1 MLTAAICGDVFASPPVDSILAGIHAVTGPMGCLLIVTNYTGDRLNFGLAAEQAKSEGYKVEIVIVGDDCALPPPRGIAGR 80 (518)
Q Consensus 1 mL~aav~G~vFaSP~~~~i~~ai~~~~~~~Gvl~iv~NYtGD~lnFg~A~e~a~~~g~~v~~v~v~DDva~~~~~~~~gR 80 (518)
||||||||+||||||++||++|||++++++|||||||||||||||||||+|+|+++||+|++|+|+||||++++ +||
T Consensus 73 ml~aav~G~vFaSPs~~~i~~ai~a~~~g~Gvl~ivkNYtGD~lnF~~A~e~a~~~gi~v~~v~v~DDva~~~~---~~R 149 (552)
T 1un8_A 73 MLTAAVCGDVFASPSVDAVLTAIQAVTGEAGCLLIVKNYTGDRLNFGLAAEKARRLGYNVEMLIVGDDISLPDN---KHP 149 (552)
T ss_dssp SBSEEEEEEETSCCCHHHHHHHHHHHCCTTCEEEEEESCHHHHHHHHHHHHHHHHTTCCEEEEEECCBCSCTTC---SSC
T ss_pred ccceeeecCcCCCCCHHHHHHHHHhhcCCCCEEEEecccHHHHhhHHHHHHHHHhcCCcEEEEEecCcccCCCC---CCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999864 899
Q ss_pred cccchhhhHHHHHhHHHHcCCCHHHHHHHHHHHHhhhcccceeccccccCCCCCCC-CcCCCceeEeccccCCCCccccc
Q 010094 81 RGLAGTILVNKIAGAAAAAGLSLADVAAEAKRASEMVGTMGVALSVCTLPGQVTSD-RLGPGKMELGLGIHGEPGAAVAD 159 (518)
Q Consensus 81 RG~aG~v~v~KiaGa~A~~G~~l~ev~~~~~~~~~~~~t~gval~~c~~P~~~~~~-~l~~~e~E~G~GiHgEpG~~~~~ 159 (518)
||+|||||||||+||+||+|+||+||+++++++++|++||||+|++||+|+++|+| +|++||||||||||||||++|.+
T Consensus 150 RGvaGtv~v~KiaGAaAe~G~~L~ev~~~a~~~~~~~~s~gval~~ctvP~~~~~f~~l~~~e~E~G~GiHGEpG~~~~~ 229 (552)
T 1un8_A 150 RGIAGTILVHKIAGYFAERGYNLATVLREAQYAASNTFSLGVALSSCHLPQETDAAPRHHPGHAELGMGIHGEPGASVID 229 (552)
T ss_dssp CCCTTHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHTEEEEEEEEECCCCSSCCSSSCCBCTTCEEETCCTTCCCCSEEES
T ss_pred CchhHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHhhceEEEEEcCCccCCCCCCCcccCCCCceEeccccCCCCCccCCC
Confidence 99999999999999999999999999999999999999999999999999999999 99999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHHhcccCCCCCCCCCeEEEEEcCCCCChHHHHHHHHHHHHHhhhhhcCCeEEEeeec--ccccccC
Q 010094 160 LQPVDVVVSHVLKQILSTETNYVPITRGNRVVLMINGLGATPVMELMIAAGKAVPNLQLEHGLAVERVYTG--SFMTSLD 237 (518)
Q Consensus 160 ~~~a~~~v~~ml~~ll~~~~~~~~~~~~~~v~vlvNnlG~ts~~El~~~~~~~~~~L~~~~gi~v~r~~~G--~~~TSl~ 237 (518)
++++++++++|+++|+++ ++++ |+|+|||||||+||+||||++++++.++|+++ | +|+|+| +||||||
T Consensus 230 ~~~a~~~~~~l~~~ll~~----~~~~--~~v~~lvN~lG~t~~~El~i~~~~v~~~L~~~-g---~~~~vG~~~~~Tsld 299 (552)
T 1un8_A 230 TQNSAQVVNLMVDKLLAA----LPET--GRLAVMINNLGGVSVAEMAIITRELASSPLHS-R---IDWLIGPASLVTALD 299 (552)
T ss_dssp CCBHHHHHHHHHHHHHHH----SCSS--CCEEEEEEECBCSCHHHHHHHHHHHHTSTTGG-G---EEEEEEEECSSCCTT
T ss_pred CCCHHHHHHHHHHHHHhh----CCCc--CcEEEEEeCCCCCCHHHHHHHHHHHHHHHHHc-C---CeeeeCCccccCccC
Confidence 999999999999999986 7777 89999999999999999999999999999888 8 999999 9999999
Q ss_pred CCcceEEEeeccHHHHHhhcCcCCCCCCCCCCCCCCCCCCCC--CCCCCCCCCCCCcccCCCccccccHHHHHHHHHHHH
Q 010094 238 MAGFSISIMKADEVILKHLDATTKAPHWPVGVDGNRPPAKIP--VPMPPSHSMKSDESLGRPLQLSQQGHVLEVTIEAAA 315 (518)
Q Consensus 238 m~GfSiTll~ld~~~~~~ldap~~a~~w~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 315 (518)
|+|||||||++|+++++|||+||++|+||+... + ...+ .+... . . . .. ..+.. + ..+++||..+|
T Consensus 300 m~G~SiTll~ld~el~~~ldap~~~~~~~~~~~---~-~~~~~~~~~~~-~-~-~-~~-~~~~~---~-~~l~~~l~~~a 366 (552)
T 1un8_A 300 MKGFSLTAIVLEESIEKALLTEVETSNWPTPVP---P-REITCVVSSHA-S-A-R-VE-FQPSA---N-ALVAGIVELVT 366 (552)
T ss_dssp BEEEEEEEEECCTTHHHHHHSCCCCSSCCCCBC---C-CCCCEECCCCC-C-C-S-CC-CCCBC---C-HHHHHHHHHHH
T ss_pred CCcceEEeecCCHHHHHHhcCCCCCCCCCCccC---c-ccccccccccc-c-c-c-CC-CCcch---h-HHHHHHHHHHH
Confidence 999999999999999999999999999997431 1 0000 00000 0 0 0 00 11111 3 56899999999
Q ss_pred HHHHHhHHhhhhccCCCCCCchhHHHHHHHHHHHHHhhhcC--CCCCHHHHHHHHHHHHHHhcCCchhhHHHHHHHHHHH
Q 010094 316 EAVVNLRDRLNEWDSKVGDGDCGSTMYRGATAILEDKKKYY--PLNDAAETVNEIGASIRRVMGGTSGILYHIFCKAAYA 393 (518)
Q Consensus 316 ~~li~~e~~Ln~LD~~vGDGD~G~tm~~ga~ai~~~l~~~~--~~~~~~~~l~~ia~a~~~~~GGtSG~Lys~~f~~~a~ 393 (518)
+.|++++++||+||+++||||||+||++||+++.+.+++ . +..++.++|+.+++.+++.||||||+|||+||+++++
T Consensus 367 ~~l~~~~d~Ln~LD~~VGDGD~GtNM~~G~~av~~~l~~-~~~~~~~~~~~l~~i~~~ll~~~GG~SG~Lyg~~f~~~ak 445 (552)
T 1un8_A 367 ATLSDLETHLNALDAKVGDGDTGSTFAAAAREIASLLHR-QQLPLNNLATLFALIGERLTVVMGGSSGVLMSIFFTAAGQ 445 (552)
T ss_dssp HHHHHTHHHHHHHHHTTSCSCHHHHHHHHHHHHHHHHHT-TCSBTTCHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHH
T ss_pred HHHHHhHHHHHHhCCCCCCCCHHHHHHHHHHHHHHHHHh-ccCCCCCHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999973 3 4668999999999999999999999999999999999
Q ss_pred HhhccCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCcchhhhhHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHhCcc
Q 010094 394 KLKASSKSGITSKQWAEALEASIAAVSKYGGATAGYRTMLDALIPAAAVLQERLSAGIDPSTAFILSSEAAIAGAESTKH 473 (518)
Q Consensus 394 ~l~~~~~~~~~~~~~~~al~~a~~~i~~~g~A~~GDkTMlDaL~Pa~~al~~~~~~~~~~~~~l~~A~~aA~~gae~T~~ 473 (518)
.++++ ++++ ++|++|++.+++||+++||||||||+|+|+++++++ +.++|++++++|++|+++|++
T Consensus 446 ~l~~~--~~l~-----~al~ag~~~i~~~g~AkpGdkTMLDaL~Paaeal~~-------~~~~l~~a~~AA~~gae~T~~ 511 (552)
T 1un8_A 446 KLEQG--ANVV-----EALNTGLAQMKFYGGADEGDRTMIDALQPALTSLLA-------QPKNLQAAFDAAQAGAERTCL 511 (552)
T ss_dssp HHHTT--CCHH-----HHHHHHHHHHHHHHCCCTTSSSTHHHHHHHHHHHHH-------STTCHHHHHHHHHHHHHHHHH
T ss_pred HhcCC--chHH-----HHHHHHHHHHHHhcCCCCCCCchhhhHHHHHHHHHH-------HHHHHHHHHHHHHHHHHhCcc
Confidence 99864 3433 999999999999999999999999999999999965 345689999999999999999
Q ss_pred h-hhhhccccccCCccC-CCCCCchHHHHHHHHHHHHHHHH
Q 010094 474 M-QAQAGRSTYISPEIL-ASVPDPGAMAAAAWYRAAALAVK 512 (518)
Q Consensus 474 m-~A~~GRAsY~gers~-g~~pDpGA~av~~il~al~~~~~ 512 (518)
| +|++|||||+|||++ |++ ||||+++++||+++++.+.
T Consensus 512 m~~A~~GRAsYlgers~~Gvv-DpGA~~~~~il~al~~~l~ 551 (552)
T 1un8_A 512 SSKANAGRASYLSSESLLGNM-DPGAQRLAMVFKALAESEL 551 (552)
T ss_dssp SCCCCC--------CCCGGGC-CHHHHHHHHHHHHHHTTC-
T ss_pred cchhhhhhhcccchhhcCCCC-CcCHHHHHHHHHHHHHHhc
Confidence 9 999999999999998 765 9999999999999987654
No 2
>3ct4_A PTS-dependent dihydroxyacetone kinase, dihydroxyacetone-binding subunit DHAK; dihydroxyacetone kinase subunit, tranferase; 2.50A {Lactococcus lactis subsp}
Probab=100.00 E-value=1e-102 Score=794.21 Aligned_cols=261 Identities=36% Similarity=0.588 Sum_probs=247.6
Q ss_pred CccccccCCCCCCCCHHHHHHHHHhccCCCCeEEEeeccccccccHHHHHHHHHhcCCcEEEEEecccccCCCCCCCCCc
Q 010094 1 MLTAAICGDVFASPPVDSILAGIHAVTGPMGCLLIVTNYTGDRLNFGLAAEQAKSEGYKVEIVIVGDDCALPPPRGIAGR 80 (518)
Q Consensus 1 mL~aav~G~vFaSP~~~~i~~ai~~~~~~~Gvl~iv~NYtGD~lnFg~A~e~a~~~g~~v~~v~v~DDva~~~~~~~~gR 80 (518)
||||||||+||||||++||++|||++++++|||+||||||||+||||||+|+|+++||+|++|+|+||||++++.+++||
T Consensus 70 MLdAAv~G~VFaSPs~~qi~~aikav~~g~GvL~ivkNYtGDvlNF~mAaE~a~~eGi~v~~VvV~DDvA~~~~~~~~gR 149 (332)
T 3ct4_A 70 MLSAAVCGAIFTSPTPDQIYEAIKSADEGAGVLLIIKNYLGDVMNFEMAREMAEMEEIKVEQIIVDDDIAVENSLYTQGR 149 (332)
T ss_dssp SBSEEEEEEETCCCCHHHHHHHHHHHCCSSCEEEEEESCHHHHHHHHHHHHHHHHTTCCEEEEEECCBCSSSSCTTCSSS
T ss_pred ccceeeecccCCCCCHHHHHHHHHhhcCCCCEEEEeCCcHHHhhcHHHHHHHHHhcCCcEEEEEeCCcccCCCcCCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999987778999
Q ss_pred cccchhhhHHHHHhHHHHcCCCHHHHHHHHHHHHhhhcccceeccccccCC-CCCCCCcCCCceeEeccccCCCCccccc
Q 010094 81 RGLAGTILVNKIAGAAAAAGLSLADVAAEAKRASEMVGTMGVALSVCTLPG-QVTSDRLGPGKMELGLGIHGEPGAAVAD 159 (518)
Q Consensus 81 RG~aG~v~v~KiaGa~A~~G~~l~ev~~~~~~~~~~~~t~gval~~c~~P~-~~~~~~l~~~e~E~G~GiHgEpG~~~~~ 159 (518)
||+|||||||||+||+||+|+||+||+++++++++|++||||+|++||+|+ ++|+|+|++||||||||||||||++|.+
T Consensus 150 RGvAGtvlv~KIaGAaAe~G~~L~ev~~~a~~~~~~~~SiGval~~ctvP~~g~p~f~l~~~emE~G~GIHGEpG~~r~~ 229 (332)
T 3ct4_A 150 RGVAGTVLVHKILGAAAHQEASLDEIKDLADKVVKNIKTIGLALSAATVPEVGKPGFVLDDNEIEYGVGIHSEPGYRREK 229 (332)
T ss_dssp CCCTTHHHHHHHHHHHHHTTCCHHHHHHHHHHHHTTEEEEEEESSCCCCC----------CCEEEETCCTTSCCCSEEEE
T ss_pred CchhHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHhhceEEEEECCCcCCCCCCCCCCccCCCceEeccccCCCCccccCC
Confidence 999999999999999999999999999999999999999999999999999 8999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHHhcccCCCCCCCCCeEEEEEcCCCCChHHHHHHHHHHHHHhhhhhcCCeEEEeeecccccccCCC
Q 010094 160 LQPVDVVVSHVLKQILSTETNYVPITRGNRVVLMINGLGATPVMELMIAAGKAVPNLQLEHGLAVERVYTGSFMTSLDMA 239 (518)
Q Consensus 160 ~~~a~~~v~~ml~~ll~~~~~~~~~~~~~~v~vlvNnlG~ts~~El~~~~~~~~~~L~~~~gi~v~r~~~G~~~TSl~m~ 239 (518)
++++++++++|+++|+++ +++++||+|+|||||||+||+||||++++++.++|+++ ||+|+|+|+|+|||||||+
T Consensus 230 ~~~a~el~~~m~~~ll~~----~~~~~gd~v~vlVNgLG~t~~~El~i~~~~v~~~L~~~-gi~v~r~~vG~~~TSldM~ 304 (332)
T 3ct4_A 230 MKTSYELATELVGKLKEE----FKFEAGQKYGILVNGMGATPLMEQFIFMNDVAKLLTEE-NIEILFKKVGNYMTSIDMA 304 (332)
T ss_dssp CCCHHHHHHHHHHHHHHH----HTCCTTCEEEEEEEECBSSCHHHHHHHHHHHHHHHHTT-TCEEEEEEEECSSCCTTBC
T ss_pred CCCHHHHHHHHHHHHHhh----cCcCCCCeEEEEEECCCCcCHHHHHHHHHHHHHHHHHC-CCeEEEEEeeccccccCCC
Confidence 999999999999999987 78889999999999999999999999999999999888 9999999999999999999
Q ss_pred cceEEEeeccH-HHHHhhcCcCCCCCCC
Q 010094 240 GFSISIMKADE-VILKHLDATTKAPHWP 266 (518)
Q Consensus 240 GfSiTll~ld~-~~~~~ldap~~a~~w~ 266 (518)
|||||||++|+ ++++|||+||++|+|+
T Consensus 305 G~SiTll~ldd~el~~lldaP~~tp~w~ 332 (332)
T 3ct4_A 305 GLSLTMIKLEDDQWLKNLNEDVKTISWG 332 (332)
T ss_dssp EEEEEEEECCSHHHHHHHTSCCBCSCC-
T ss_pred ccEEEEEECCHHHHHHHhCCCCCCCCCC
Confidence 99999999999 9999999999999994
No 3
>1oi2_A Hypothetical protein YCGT; kinase, dihydroxyacetone kinase; 1.75A {Escherichia coli} SCOP: c.119.1.2 PDB: 1oi3_A 1uod_A* 1uoe_A 3pnl_A* 3pnk_A* 3pno_A 3pnq_A 3pnm_A
Probab=100.00 E-value=1.1e-102 Score=797.15 Aligned_cols=267 Identities=39% Similarity=0.624 Sum_probs=251.1
Q ss_pred CccccccCCCCCCCCHHHHHHHHHhccCCCCeEEEeeccccccccHHHHHHHHHhcCCcEEEEEecccccCCCCCCCCCc
Q 010094 1 MLTAAICGDVFASPPVDSILAGIHAVTGPMGCLLIVTNYTGDRLNFGLAAEQAKSEGYKVEIVIVGDDCALPPPRGIAGR 80 (518)
Q Consensus 1 mL~aav~G~vFaSP~~~~i~~ai~~~~~~~Gvl~iv~NYtGD~lnFg~A~e~a~~~g~~v~~v~v~DDva~~~~~~~~gR 80 (518)
||||||||+||||||++||++|||++++++||||||||||||+||||||+|+|+++||+|++|+|+||||++++.+++||
T Consensus 78 MLdaAv~G~VFaSPs~~qi~~ai~av~~g~GvL~ivkNYtGDvlNF~mA~E~a~~eGi~v~~Vvv~DDvAv~~~~~~~gR 157 (366)
T 1oi2_A 78 MLSGACPGEIFTSPTPDKIFECAMQVDGGEGVLLIIKNYTGDILNFETATELLHDSGVKVTTVVIDDDVAVKDSLYTAGR 157 (366)
T ss_dssp SBSEEEEEEETSCCCHHHHHHHHHHHCCSSCEEEEEESSHHHHHHHHHHHHHHHHTTCCEEEEEECCBCSCBSCTTCSSB
T ss_pred ccceeeecccCCCCCHHHHHHHHHhhcCCCCEEEEeCCcHHHhhcHHHHHHHHHhcCCcEEEEEecCceecCCCCCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999987778999
Q ss_pred cccchhhhHHHHHhHHHHcCCCHHHHHHHHHHHHhhhcccceeccccccCC-CCCCCCcCCCceeEeccccCCCCccccc
Q 010094 81 RGLAGTILVNKIAGAAAAAGLSLADVAAEAKRASEMVGTMGVALSVCTLPG-QVTSDRLGPGKMELGLGIHGEPGAAVAD 159 (518)
Q Consensus 81 RG~aG~v~v~KiaGa~A~~G~~l~ev~~~~~~~~~~~~t~gval~~c~~P~-~~~~~~l~~~e~E~G~GiHgEpG~~~~~ 159 (518)
||+|||||||||+||+||+|+||+||+++++++++|++||||+|++||+|+ ++|+|+|++||||||||||||||++|.+
T Consensus 158 RGvAGtvlv~KiaGAaAe~G~sL~ev~~~a~~~~~~~~SiGvaL~~ctvP~~g~p~F~l~~~emE~G~GIHGEPG~~r~~ 237 (366)
T 1oi2_A 158 RGVANTVLIEKLVGAAAERGDSLDACAELGRKLNNQGHSIGIALGACTVPAAGKPSFTLADNEMEFGVGIHGEPGIDRRP 237 (366)
T ss_dssp CCCTHHHHHHHHHHHHHHHTCCHHHHHHHHHHHHTTEEEEEEEEECC-----------CCTTEEEETCCTTSCCCSEEEE
T ss_pred CchhHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHhhceEEEEECCCcCCCCCCCCCCccCCCceEeccccCCCCccccCC
Confidence 999999999999999999999999999999999999999999999999999 8999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHHhc--------------------ccCCCCCCCCCeEEEEEcCCCCChHHHHHHHHHHHHHhhhhh
Q 010094 160 LQPVDVVVSHVLKQILST--------------------ETNYVPITRGNRVVLMINGLGATPVMELMIAAGKAVPNLQLE 219 (518)
Q Consensus 160 ~~~a~~~v~~ml~~ll~~--------------------~~~~~~~~~~~~v~vlvNnlG~ts~~El~~~~~~~~~~L~~~ 219 (518)
++|+++++++|+++|+++ +|.|+++++||+|+|||||||+||++|||++++++.++|+++
T Consensus 238 ~~sa~elv~~m~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gd~v~vLVNgLG~T~~~El~iv~~~v~~~L~~~ 317 (366)
T 1oi2_A 238 FSSLDQTVDEMFDTLLVNGSYHRTLRFWDYQQGSWQEEQQTKQPLQSGDRVIALVNNLGATPLSELYGVYNRLTTRCQQA 317 (366)
T ss_dssp CCCHHHHHHHHHHHHHHSCCEEEEEEEEETTTTEEEEEEEEECCCCTTCEEEEEEEECBSCCHHHHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHhcccccccccccccccccccccccccCCCCCCCeEEEEEECCCCccHHHHHHHHHHHHHHHHHC
Confidence 999999999999999986 155789999999999999999999999999999999999888
Q ss_pred cCCeEEEeeecccccccCCCcceEEEeeccHHHHHhhcCcCCCCCCCCC
Q 010094 220 HGLAVERVYTGSFMTSLDMAGFSISIMKADEVILKHLDATTKAPHWPVG 268 (518)
Q Consensus 220 ~gi~v~r~~~G~~~TSl~m~GfSiTll~ld~~~~~~ldap~~a~~w~~~ 268 (518)
||+|+|+|+|+|||||||+|||||||++|+++++|||+||++|+|||+
T Consensus 318 -gi~v~r~~vG~y~TSLdM~G~SiTLl~lddel~~lldaP~~tpa~~~g 365 (366)
T 1oi2_A 318 -GLTIERNLIGAYCTSLDMTGFSITLLKVDDETLALWDAPVHTPALNWG 365 (366)
T ss_dssp -TCEEEEEEEECSSCCTTBEEEEEEEEEECHHHHHHHHSCEESSSCEEC
T ss_pred -CCeEEEEeeecccCCCCCCccEEEEEecCHHHHHHhCCCCCCCcCCCC
Confidence 999999999999999999999999999999999999999999999984
No 4
>2iu4_A DHA-DHAQ, dihydroxyacetone kinase; transferase, CO-activa kinase; HET: HIQ; 1.96A {Lactococcus lactis} PDB: 2iu6_A
Probab=100.00 E-value=9.1e-103 Score=794.60 Aligned_cols=262 Identities=32% Similarity=0.497 Sum_probs=256.9
Q ss_pred CccccccCCCCCCCCHHHHHHHHHhccCCCCeEEEeeccccccccHHHHHHHHHhcCCcEEEEEecccccCCCCCCCCCc
Q 010094 1 MLTAAICGDVFASPPVDSILAGIHAVTGPMGCLLIVTNYTGDRLNFGLAAEQAKSEGYKVEIVIVGDDCALPPPRGIAGR 80 (518)
Q Consensus 1 mL~aav~G~vFaSP~~~~i~~ai~~~~~~~Gvl~iv~NYtGD~lnFg~A~e~a~~~g~~v~~v~v~DDva~~~~~~~~gR 80 (518)
||||||||+||||||++||++|||++++++|||+||||||||+||||||+|+|+++||+|++|+|+||||++++.+++||
T Consensus 66 MLdAAv~G~VFaSPs~~qi~~aikav~~g~GvL~ivkNYtGDvlNF~mAaE~a~~eGi~v~~VvV~DDvA~~~~~~~~gR 145 (336)
T 2iu4_A 66 MLAAAVTGPLFIPPKSKNILKAIRQVNSGKGVFVIIKNFEADLKEFNEAIKEARTEGIDVRYIVSHDDISVNAYNFHKRH 145 (336)
T ss_dssp SBSEEEEEEETSCCCHHHHHHHHHHHCSSSCEEEEEESCHHHHHHHHHHHHHHHHTTCCEEEEEECCBCHHHHHTCCSCC
T ss_pred ccceeeecccCCCCCHHHHHHHHHhhcCCCCEEEEeCCcHHHhhcHHHHHHHHHhCCCcEEEEEecCceecCCCCCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999877668999
Q ss_pred cccchhhhHHHHHhHHHHcCCCHHHHHHHHHHHHhhhcccceeccccccCCCCCCCCcCCCceeEeccccCCCCcccccC
Q 010094 81 RGLAGTILVNKIAGAAAAAGLSLADVAAEAKRASEMVGTMGVALSVCTLPGQVTSDRLGPGKMELGLGIHGEPGAAVADL 160 (518)
Q Consensus 81 RG~aG~v~v~KiaGa~A~~G~~l~ev~~~~~~~~~~~~t~gval~~c~~P~~~~~~~l~~~e~E~G~GiHgEpG~~~~~~ 160 (518)
||+|||||||||+||+||+|+||+||+++++++++|++||||+|++||+|+.+|+|+|++||||||||||||||++|.++
T Consensus 146 RGvAGtvlv~KIaGAaAe~G~~L~ev~~~a~~~~~~~~SiGvaL~~ctvP~~~p~F~l~~~emE~G~GIHGEpG~~r~~~ 225 (336)
T 2iu4_A 146 RGVAGTILLHKILGAFAKEGGSIDEIEQLALSLSPEIYTLGVALAPVHFPHQKTSFVLAEDEVSFGIGIXGEPGYRVEKF 225 (336)
T ss_dssp CCCTTHHHHHHHHHHHHHTTCCHHHHHHHHHHHGGGEEEEEEEEECCEETTTEESSCCCTTEEEESCCCCCCCCSEEEEC
T ss_pred CchhHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHhhceEEEEECCCccCCCCCCCCccCCCceEecccccCCCCccccCC
Confidence 99999999999999999999999999999999999999999999999999998999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHHhcccCCCCCC--CCCeEEEEEcCCCCChHHHHHHHHHHHHHhhhhhcCCeEEEeeecccccccCC
Q 010094 161 QPVDVVVSHVLKQILSTETNYVPIT--RGNRVVLMINGLGATPVMELMIAAGKAVPNLQLEHGLAVERVYTGSFMTSLDM 238 (518)
Q Consensus 161 ~~a~~~v~~ml~~ll~~~~~~~~~~--~~~~v~vlvNnlG~ts~~El~~~~~~~~~~L~~~~gi~v~r~~~G~~~TSl~m 238 (518)
+++++++++|+++|+++ ++++ +||+|+|||||||+||+||||++++++.++|+++ ||+|+|+|+|+|||||||
T Consensus 226 ~~a~el~~~m~~~ll~~----l~~~~~~gd~v~vlVNgLG~t~~~El~i~~~~v~~~L~~~-gi~v~r~~vG~~~TSLdM 300 (336)
T 2iu4_A 226 EGSERIAIELVNKLKAE----INWQKKANKNYILLVNGLGSTTLMELYSFQYDVMRLLELE-GLSVKFCKVGNLMTSCDM 300 (336)
T ss_dssp CCHHHHHHHHHHHHHHH----HCGGGCSCCEEEEEEEECBSSCHHHHHHHHHHHHHHHHHT-TCEEEEEEEECSSCCTTB
T ss_pred CCHHHHHHHHHHHHHhh----CccccCCCCeEEEEEECCCCccHHHHHHHHHHHHHHHHHC-CCeEEEEeeecccCccCC
Confidence 99999999999999986 7887 8999999999999999999999999999999888 999999999999999999
Q ss_pred CcceEEEeeccH-HHHHhhcCcCCCCCCCC
Q 010094 239 AGFSISIMKADE-VILKHLDATTKAPHWPV 267 (518)
Q Consensus 239 ~GfSiTll~ld~-~~~~~ldap~~a~~w~~ 267 (518)
+|||||||++|+ +|++|||+||++|+|+.
T Consensus 301 ~G~SiTll~ldd~el~~lldaP~~tpa~~~ 330 (336)
T 2iu4_A 301 SGISLTLCSVKDPKWLDYLNVPTGAFAWLE 330 (336)
T ss_dssp EEEEEEEEECCSTHHHHHHHSCCCCTTCCC
T ss_pred CccEEEEEECCHHHHHHHhcCCCCCcccch
Confidence 999999999999 99999999999999975
No 5
>3pnl_B PTS-dependent dihydroxyacetone kinase, ADP-bindin DHAL; structural genomics, montreal-kingston bacterial structural initiative, BSGI; HET: ADP; 2.20A {Escherichia coli} SCOP: a.208.1.0 PDB: 2btd_A*
Probab=100.00 E-value=1.5e-53 Score=414.11 Aligned_cols=207 Identities=24% Similarity=0.336 Sum_probs=197.5
Q ss_pred ccHHHHHHHHHHHHHHHHHhHHhhhhccCCCCCCchhHHHHHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHhcCCchh
Q 010094 302 QQGHVLEVTIEAAAEAVVNLRDRLNEWDSKVGDGDCGSTMYRGATAILEDKKKYYPLNDAAETVNEIGASIRRVMGGTSG 381 (518)
Q Consensus 302 ~~~~~~~~~l~~~~~~li~~e~~Ln~LD~~vGDGD~G~tm~~ga~ai~~~l~~~~~~~~~~~~l~~ia~a~~~~~GGtSG 381 (518)
.+...+++||..+|+.|++++++||+||++|||||||+||.+||+++.+.+++ .+..++.++|..+++.+++.||||||
T Consensus 4 ~~~~~~~~~l~~~~~~l~~~~~~L~~LD~~vGDGD~G~nm~~g~~av~~~l~~-~~~~~~~~~l~~~~~~~~~~~gG~SG 82 (211)
T 3pnl_B 4 LSRTQIVNWLTRCGDIFSTESEYLTGLDREIGDADHGLNMNRGFSKVVEKLPA-IADKDIGFILKNTGMTLLSSVGGASG 82 (211)
T ss_dssp EEHHHHHHHHHHHHHHHHHTHHHHHHHHHHTSCSCHHHHHHHHHHHHHHHSGG-GTTSCHHHHHHHHHHHHHTTTCTTHH
T ss_pred CCHHHHHHHHHHHHHHHHHhHHHHHHhCCCCCCCcHHHHHHHHHHHHHHHHHh-CCCCCHHHHHHHHHHHHHHcCCCcHH
Confidence 46788999999999999999999999999999999999999999999999984 56678999999999999999999999
Q ss_pred hHHHHHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCcchhhhhHHHHHHHHHHHHhCCCCHHHHHHHHH
Q 010094 382 ILYHIFCKAAYAKLKASSKSGITSKQWAEALEASIAAVSKYGGATAGYRTMLDALIPAAAVLQERLSAGIDPSTAFILSS 461 (518)
Q Consensus 382 ~Lys~~f~~~a~~l~~~~~~~~~~~~~~~al~~a~~~i~~~g~A~~GDkTMlDaL~Pa~~al~~~~~~~~~~~~~l~~A~ 461 (518)
||||+||+++++.++++ ++++.++|+++|+++++.+++||+++||||||||+|+|+++++++...++.++.++|++++
T Consensus 83 ~L~~~~f~~~a~~l~~~--~~~~~~~~~~al~~a~~~i~~~g~a~~GdkTmlD~l~pa~~a~~~~~~~~~~~~~~l~~a~ 160 (211)
T 3pnl_B 83 PLFGTFFIRAAQATQAR--QSLTLEELYQMFRDGADGVISRGKAEPGDKTMCDVWVPVVESLRQSSEQNLSVPVALEAAS 160 (211)
T ss_dssp HHHHHHHHHHHHHHCSC--SEEEHHHHHHHHHHHHHHHHHHHCCCTTSSSTHHHHHHHHHHHHHHHHTTCCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhccC--CCCCHHHHHHHHHHHHHHHHHhcCCCCCCChHHHhHHHHHHHHHHHHhcCCCHHHHHHHHH
Confidence 99999999999999875 6799999999999999999999999999999999999999999998888999999999999
Q ss_pred HHHHHHHHhCcchhhhhccccccCCccCCCCCCchHHHHHHHHHHHHHHHH
Q 010094 462 EAAIAGAESTKHMQAQAGRSTYISPEILASVPDPGAMAAAAWYRAAALAVK 512 (518)
Q Consensus 462 ~aA~~gae~T~~m~A~~GRAsY~gers~g~~pDpGA~av~~il~al~~~~~ 512 (518)
++|++|+++|++|+|++|||||+|||++|++ ||||+++++||++|++.++
T Consensus 161 ~aA~~g~e~T~~m~a~~GRAsylgers~G~~-DpGA~~~~~il~~l~~~l~ 210 (211)
T 3pnl_B 161 SIAESAAQSTITMQARKGRASYLGERSIGHQ-DPGATSVMFMMQMLALAAK 210 (211)
T ss_dssp HHHHHHHHHGGGSCCCSSGGGGGGGGGTTSC-CHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHhchhhhHHhhhhhhccccccCCC-CCcHHHHHHHHHHHHHHHh
Confidence 9999999999999999999999999999765 9999999999999998764
No 6
>3cr3_A PTS-dependent dihydroxyacetone kinase, ADP- binding subunit DHAL; transient protein-protein complex transferase complex PTS- dependent dihydroxyacetone kinase; HET: ADP; 2.10A {Lactococcus lactis subsp} SCOP: a.208.1.1
Probab=100.00 E-value=1.9e-50 Score=386.86 Aligned_cols=189 Identities=23% Similarity=0.304 Sum_probs=177.0
Q ss_pred cHHHHHHHHHHHHHHHHHhHHhhhhccCCCCCCchhHHHHHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHhcCCchhh
Q 010094 303 QGHVLEVTIEAAAEAVVNLRDRLNEWDSKVGDGDCGSTMYRGATAILEDKKKYYPLNDAAETVNEIGASIRRVMGGTSGI 382 (518)
Q Consensus 303 ~~~~~~~~l~~~~~~li~~e~~Ln~LD~~vGDGD~G~tm~~ga~ai~~~l~~~~~~~~~~~~l~~ia~a~~~~~GGtSG~ 382 (518)
+.+.+++||..+|+.|++++++||+||++|||||||+||.+|++++.+.+++ .+..++.++|+.+++.+++.|||||||
T Consensus 3 ~~~~~~~~l~~~~~~l~~~~~~L~~LD~~vGDGD~G~nm~~g~~a~~~~l~~-~~~~~~~~~l~~~~~~~~~~~gG~SG~ 81 (192)
T 3cr3_A 3 TIDTTIEWLGKFNEKIQENKAYLSELDGPIGDGDHGANMARGMSETMKALEV-SNFGNVSEIFKKVAMTLMSKVGGASGP 81 (192)
T ss_dssp CHHHHHHHHHHHHHHHHHTHHHHHHHTTTTSCSCHHHHHHHHHHHHHHHHHH-CCCSSHHHHHHHHHHHHHHHCCSTHHH
T ss_pred CHHHHHHHHHHHHHHHHHhHHHHHHhCCCCCCCchhHHHHHHHHHHHHHHhc-CCCCCHHHHHHHHHHHHHhcCCCcHHH
Confidence 4677999999999999999999999999999999999999999999999984 566789999999999999999999999
Q ss_pred HHHHHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCcchhhhhHHHHHHHHHHHHhCCCCHHHHHHHHHH
Q 010094 383 LYHIFCKAAYAKLKASSKSGITSKQWAEALEASIAAVSKYGGATAGYRTMLDALIPAAAVLQERLSAGIDPSTAFILSSE 462 (518)
Q Consensus 383 Lys~~f~~~a~~l~~~~~~~~~~~~~~~al~~a~~~i~~~g~A~~GDkTMlDaL~Pa~~al~~~~~~~~~~~~~l~~A~~ 462 (518)
|||+||+++++.+ ++.++|+++|+++++.+++||+++||||||||+|+|+++++++. + ++++
T Consensus 82 L~~~~f~~~a~~l-------~~~~~~a~al~~~~~~i~~~g~a~~gdkTmlDal~pa~~a~~~~----------~-~a~~ 143 (192)
T 3cr3_A 82 LYGSAFLAMSKTA-------IETLDTSELIYAGLEAIQKRGKAQVGEKTMVDIWSAFLNDLQTD----------S-ASKD 143 (192)
T ss_dssp HHHHHHHHHHHHH-------TTCCCHHHHHHHHHHHHHHHHCCCTTSSSTHHHHHHHHHHHHTT----------C-CCHH
T ss_pred HHHHHHHHHHHHh-------CCHHHHHHHHHHHHHHHHHHhCCCCCCChHHHHHHHHHHHHHHH----------H-HHHH
Confidence 9999999999998 45567999999999999999999999999999999999999652 1 6899
Q ss_pred HHHHHHHhCcchhhhhccccccCCccCCCCCCchHHHHHHHHHHHHHHH
Q 010094 463 AAIAGAESTKHMQAQAGRSTYISPEILASVPDPGAMAAAAWYRAAALAV 511 (518)
Q Consensus 463 aA~~gae~T~~m~A~~GRAsY~gers~g~~pDpGA~av~~il~al~~~~ 511 (518)
+|++++++|++|+|++|||||+|||++|+ |||||+++++||+++.+.+
T Consensus 144 aA~~g~e~T~~m~a~~GRAsylgers~G~-~DpGA~~~~~il~~~~~~~ 191 (192)
T 3cr3_A 144 NLEKVVKASAGLLATKGRASYLGERSIGH-IDPGTQSSAYLFETLLEVV 191 (192)
T ss_dssp HHHHHHHHGGGSCCCSSGGGGGGGGGTTS-CCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhhhhhHHHHhhhhhccccccCC-CCccHHHHHHHHHHHHHHh
Confidence 99999999999999999999999999966 5999999999999998865
No 7
>3nyi_A FAT acid-binding protein; stearic acid, DEGV family protein, structural genomics, PSI- protein structure initiative; HET: STE; 1.90A {Eubacterium ventriosum} SCOP: c.119.1.0
Probab=74.41 E-value=11 Score=37.37 Aligned_cols=94 Identities=12% Similarity=0.102 Sum_probs=67.1
Q ss_pred CCCHHHHHHHHHhc-cCCCCeEEEe--eccccccccHHHHHHHHHhc--CCcEEEEEecccccCCCCCCCCCccccchhh
Q 010094 13 SPPVDSILAGIHAV-TGPMGCLLIV--TNYTGDRLNFGLAAEQAKSE--GYKVEIVIVGDDCALPPPRGIAGRRGLAGTI 87 (518)
Q Consensus 13 SP~~~~i~~ai~~~-~~~~Gvl~iv--~NYtGD~lnFg~A~e~a~~~--g~~v~~v~v~DDva~~~~~~~~gRRG~aG~v 87 (518)
-||+.++.++.+.. ..+..||+|- ..-+|=.=+.-+|+++..++ +.+|.+| |- |.--.|.-
T Consensus 67 qps~~~~~~~f~~l~~~g~~ii~i~iSs~LSGTy~sA~~aa~~~~e~~~~~~I~Vi---DS-----------~~~s~g~g 132 (297)
T 3nyi_A 67 LPSVESYADVFRSFVEQGFPVVCFTITTLFSGSYNSAINAKSLVLEDYPDANICVI---DS-----------KQNTVTQA 132 (297)
T ss_dssp CCCHHHHHHHHHHHHTTTCCEEEEESCTTTCSHHHHHHHHHHHHHHHCTTCCEEEE---EC-----------SCCHHHHH
T ss_pred CCCHHHHHHHHHHHHHCCCeEEEEECCCcHhHHHHHHHHHHHHHHhhCCCCeEEEE---eC-----------CchHHHHH
Confidence 48999999999765 3456787775 45677777788888877554 4444433 21 22234444
Q ss_pred hHHHHHhHHHHcCCCHHHHHHHHHHHHhhhccc
Q 010094 88 LVNKIAGAAAAAGLSLADVAAEAKRASEMVGTM 120 (518)
Q Consensus 88 ~v~KiaGa~A~~G~~l~ev~~~~~~~~~~~~t~ 120 (518)
++..-|-.++++|+|++||.+..++..+++++.
T Consensus 133 ~~v~~A~~l~~~G~s~~eI~~~l~~~~~~~~~~ 165 (297)
T 3nyi_A 133 LLIDQFVRMLEDGLSFEQAMSKLDALMASARIF 165 (297)
T ss_dssp HHHHHHHHHHHTTCCHHHHHHHHHHHHHHCEEE
T ss_pred HHHHHHHHHHHcCCCHHHHHHHHHHHHhhcEEE
Confidence 555557889999999999999999999887765
No 8
>3fdj_A DEGV family protein; GUT microbiome, structural genomics, PSI-2, protein ST initiative, midwest center for structural genomics, MCSG; HET: MSE P6G PG4; 1.80A {Eubacterium eligens} SCOP: c.119.1.0
Probab=73.09 E-value=15 Score=36.19 Aligned_cols=205 Identities=10% Similarity=0.082 Sum_probs=109.1
Q ss_pred CCCHHHHHHHHHhccCCCCeEEEe--eccccccccHHHHHHHHHhcCCcEEEEEecccccCCCCCCCCCccccchhhhHH
Q 010094 13 SPPVDSILAGIHAVTGPMGCLLIV--TNYTGDRLNFGLAAEQAKSEGYKVEIVIVGDDCALPPPRGIAGRRGLAGTILVN 90 (518)
Q Consensus 13 SP~~~~i~~ai~~~~~~~Gvl~iv--~NYtGD~lnFg~A~e~a~~~g~~v~~v~v~DDva~~~~~~~~gRRG~aG~v~v~ 90 (518)
.||+.++.++.+ +...||+|- ..-+|=.=+.-+|+++..++--+.++.+|+- |.--.|.-++.
T Consensus 62 qps~~~~~~~f~---~~~~ii~i~iSs~LSGTy~sA~~aa~~~~ee~~~~~I~ViDS------------~~~s~g~g~~v 126 (278)
T 3fdj_A 62 CPGIDAWLEAFG---DDDEIFVVTITAGMSGTYNSAMAARAVYLEEHPQAKVRVIDS------------KSTGPQMRIIL 126 (278)
T ss_dssp CCCHHHHHHHHT---TCSEEEEEESCTTTCSHHHHHHHHHHHHHTTCTTCEEEEEEC------------SSCTHHHHHHH
T ss_pred CCCHHHHHHHHh---cCCcEEEEECCCcHhHHHHHHHHHHHHHHhhCCCCeEEEEcC------------CchhHHHHHHH
Confidence 488888888886 345677665 4466766678888888766522233333322 22334555666
Q ss_pred HHHhHHHHcCCCHHHHHHHHHHHHhhhcccceec--cccccCCCCC-CCCcCCCceeEeccccC-CCCc--ccccCCCHH
Q 010094 91 KIAGAAAAAGLSLADVAAEAKRASEMVGTMGVAL--SVCTLPGQVT-SDRLGPGKMELGLGIHG-EPGA--AVADLQPVD 164 (518)
Q Consensus 91 KiaGa~A~~G~~l~ev~~~~~~~~~~~~t~gval--~~c~~P~~~~-~~~l~~~e~E~G~GiHg-EpG~--~~~~~~~a~ 164 (518)
.-|-.++++|+|++||.+..++..+++++.=+-= ..=.-=|+=. .--+=-+-+-|=-=+|= +-|. -..+..+.+
T Consensus 127 ~~A~~~~~~G~s~~eI~~~l~~~~~~~~~~f~v~~L~~L~kGGRis~~~a~ig~lL~IKPIl~~~~~G~l~~~~KvRg~k 206 (278)
T 3fdj_A 127 EQLQQMIEEGKKFEEIDGAIDAYMQKTRLFCSLKSLHNLAQNGRVSKVVASAAEVLGISVIGTASSHGTLEAIGKCRGDK 206 (278)
T ss_dssp HHHHHHHHTTCCHHHHHHHHHHHHTTEEEEEEESCCHHHHHTTSSCHHHHHGGGSTTEEEEEEECTTSSEEEEEEEESHH
T ss_pred HHHHHHHHcCCCHHHHHHHHHHHHhcceEEEEECChHHHHHCCcchHHHHHHHHhhCcEEEEEEccCCeEEEeeeecCHH
Confidence 6677899999999999999999998887653310 0000001100 00000000111111232 3342 234556667
Q ss_pred HHHHHHHHHHHhcccCCCCCCCCCeEEEEEcCCCCChHHHHHHHHHHHHHhhhhhcC-CeEEEeeeccccc-ccCCCcce
Q 010094 165 VVVSHVLKQILSTETNYVPITRGNRVVLMINGLGATPVMELMIAAGKAVPNLQLEHG-LAVERVYTGSFMT-SLDMAGFS 242 (518)
Q Consensus 165 ~~v~~ml~~ll~~~~~~~~~~~~~~v~vlvNnlG~ts~~El~~~~~~~~~~L~~~~g-i~v~r~~~G~~~T-Sl~m~GfS 242 (518)
..+++|++.+.+. .. ...++. +.+. + . .|. +.++.+.|+++++ .++.-..+|.-++ =.+-.|+.
T Consensus 207 ka~~~l~~~~~~~-----~~-~~~~v~-i~h~-~-~--~e~---a~~l~~~l~~~~~~~~i~i~~~g~vi~~h~G~gal~ 272 (278)
T 3fdj_A 207 KLLVKLQALLDDA-----GY-EGGKLR-ICHV-E-N--EAL---ADKIADMIKQAYGTTDVCVYKAGGLCSYYAERGGII 272 (278)
T ss_dssp HHHHHHHHHHHHH-----TC-CSCCEE-EEES-S-C--HHH---HHHHHHHHHHHHCCCCEEEEECCHHHHHHHCTTCEE
T ss_pred HHHHHHHHHHHHh-----CC-CCcEEE-EEec-C-C--HHH---HHHHHHHHHHhCCCCcEEEEEeCcEEEEEECCCeEE
Confidence 7888888877653 11 233444 3332 1 2 232 3444555555544 3444445565554 34555565
Q ss_pred EEEe
Q 010094 243 ISIM 246 (518)
Q Consensus 243 iTll 246 (518)
|...
T Consensus 273 i~~~ 276 (278)
T 3fdj_A 273 LSCE 276 (278)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 5543
No 9
>3pl5_A SMU_165, putative uncharacterized protein; fatty acid binding protein, lipid binding protein; HET: PLM; 2.04A {Streptococcus mutans}
Probab=72.94 E-value=11 Score=38.00 Aligned_cols=199 Identities=15% Similarity=0.111 Sum_probs=109.6
Q ss_pred CCCHHHHHHHHHhc-cCCCCeEEEe--eccccccccHHHHHHHHHhc--CCcEEEEEecccccCCCCCCCCCccccchhh
Q 010094 13 SPPVDSILAGIHAV-TGPMGCLLIV--TNYTGDRLNFGLAAEQAKSE--GYKVEIVIVGDDCALPPPRGIAGRRGLAGTI 87 (518)
Q Consensus 13 SP~~~~i~~ai~~~-~~~~Gvl~iv--~NYtGD~lnFg~A~e~a~~~--g~~v~~v~v~DDva~~~~~~~~gRRG~aG~v 87 (518)
.||+.++.++.+.. ..+..||+|- ..-+|=.=+.-+|+++..++ +.+|.+ | |- +.--.|.-
T Consensus 98 qPs~~~~~~~f~~l~~~g~~Ii~I~iSS~LSGTy~sA~~Aa~~~~e~~~~~~I~V--i-DS-----------~~~s~g~g 163 (320)
T 3pl5_A 98 QVNVGQFESYFRQSAENGQEVLYIAFSSVLSGTYQSAVMARDIVLEEYPQASIEI--V-DT-----------LAATGGEG 163 (320)
T ss_dssp CCCHHHHHHHHHHHHHTTCCEEEEECCTTTCTHHHHHHHHHHHHHHHCTTCCEEE--E-EC-----------CCCHHHHH
T ss_pred CCCHHHHHHHHHHHHHCCCeEEEEecCchHhHHHHHHHHHHHHHHhhCCCCeEEE--E-cC-----------CchHHHHH
Confidence 48999999998765 3456777775 45677777788888887654 344443 3 21 22334555
Q ss_pred hHHHHHhHHHHcCCCHHHHHHHHHHHHhhhcccceecc--ccccCCC-CCCCCcCCCceeEeccccCC-CCc--ccccCC
Q 010094 88 LVNKIAGAAAAAGLSLADVAAEAKRASEMVGTMGVALS--VCTLPGQ-VTSDRLGPGKMELGLGIHGE-PGA--AVADLQ 161 (518)
Q Consensus 88 ~v~KiaGa~A~~G~~l~ev~~~~~~~~~~~~t~gval~--~c~~P~~-~~~~~l~~~e~E~G~GiHgE-pG~--~~~~~~ 161 (518)
++..-|-.++++|+|++||.+..++..+++.+.=+-=+ .=.-=|+ .+.--+=-+-+-|=-=+|=+ -|. -..+..
T Consensus 164 ~lv~~Aa~l~~~G~s~eeI~~~le~~~~~~~~~f~v~~L~yL~kGGRIs~~~a~iG~lL~IKPIl~~~~dG~l~~~~KvR 243 (320)
T 3pl5_A 164 YLAMLAAQAREEGKSLKETKELILDVGPRLRTFFLVDNLYHLMRGGRLSKTSAIVGSLVNIKPLLWLDASGKLVPIAKLR 243 (320)
T ss_dssp HHHHHHHHHHHTTCCHHHHHHHHHHHGGGEEEEEECSCSHHHHHHTCCC--------CTTEEEEEEECTTSCEEEEEEEE
T ss_pred HHHHHHHHHHhcCCCHHHHHHHHHHHHhhceEEEEECChHHHHhCCCccHHHHHHHhhhCceEEEEEccCCeEEEEeeec
Confidence 56666678999999999999999999998877633100 0000011 00000000111111112222 342 235566
Q ss_pred CHHHHHHHHHHHHHhcccCCCCCCCCCeEEEEEcCCCCChHHHHHHHHHHHHHhhhhhcCC-eEEEeeecccccccCCCc
Q 010094 162 PVDVVVSHVLKQILSTETNYVPITRGNRVVLMINGLGATPVMELMIAAGKAVPNLQLEHGL-AVERVYTGSFMTSLDMAG 240 (518)
Q Consensus 162 ~a~~~v~~ml~~ll~~~~~~~~~~~~~~v~vlvNnlG~ts~~El~~~~~~~~~~L~~~~gi-~v~r~~~G~~~TSl~m~G 240 (518)
+.+..+++|++.+.+. .. ..+ +.+.+. + . .|. +.++.+.|+++++. .+.-..+|+-+.+==.+|
T Consensus 244 g~kka~~~lv~~~~~~----~~---~~~-v~I~h~-~-~--~e~---a~~l~~~l~~~~~~~~i~i~~ig~vIg~H~GpG 308 (320)
T 3pl5_A 244 GRKKGMKEMLKRATAD----VA---HDT-AVVAYA-N-D--SEA---AENLKEQLLANEKIKNVVTLPLGPVISTHVGPN 308 (320)
T ss_dssp SHHHHHHHHHHHHTSS----CC---SSE-EEEEES-S-C--HHH---HHHHHHHHHTSTTCCEEEEEECCHHHHHHHCTT
T ss_pred CHHHHHHHHHHHHHHh----cC---CCE-EEEEeC-C-C--HHH---HHHHHHHHHhhcCCCcEEEEEeccEEEEEecCC
Confidence 7778889999888653 22 233 334443 2 1 233 35666777777664 333344565554433333
No 10
>3jr7_A Uncharacterized EGV family protein COG1307; structural genomics, PSI2, MCSG, protein struct initiative; HET: PG6; 2.00A {Ruminococcus gnavus}
Probab=71.50 E-value=12 Score=37.32 Aligned_cols=195 Identities=14% Similarity=0.165 Sum_probs=108.2
Q ss_pred CCCHHHHHHHHHhccCCCCeEEEe--eccccccccHHHHHHHHHhc--CCcEEEEEecccccCCCCCCCCCccccchhhh
Q 010094 13 SPPVDSILAGIHAVTGPMGCLLIV--TNYTGDRLNFGLAAEQAKSE--GYKVEIVIVGDDCALPPPRGIAGRRGLAGTIL 88 (518)
Q Consensus 13 SP~~~~i~~ai~~~~~~~Gvl~iv--~NYtGD~lnFg~A~e~a~~~--g~~v~~v~v~DDva~~~~~~~~gRRG~aG~v~ 88 (518)
.||+.++.++.+. ....||+|- ..-+|=.=+.-+|+++..++ +.+|. +|+- |.--.|.=+
T Consensus 82 qps~~~~~~~f~~--~~~~Ii~i~iSs~LSGTy~sA~~Aa~~~~e~~~~~~I~--ViDS------------~~~s~g~g~ 145 (298)
T 3jr7_A 82 CPSPERYMESYHC--DAERIYVVTLSAELSGSYNSAVLGKNLYEEEYGEKQIH--VFNS------------RSASVGETL 145 (298)
T ss_dssp CCCHHHHHHHHCS--SCSEEEEEESCTTTCSHHHHHHHHHHHHHHHHCCCEEE--EEEC------------SSCTHHHHH
T ss_pred CCCHHHHHHHHHh--cCCeEEEEECCcchhHHHHHHHHHHHHHHhhCCCCeEE--EECC------------CchhHHHHH
Confidence 4899999999884 455677664 45667666778888877654 33433 3322 222345555
Q ss_pred HHHHHhHHHHcCCCHHHHHHHHHHHHhhhccccee--ccccccCCC-CCCCCcCCCceeEeccc-cCCCCc--ccccCCC
Q 010094 89 VNKIAGAAAAAGLSLADVAAEAKRASEMVGTMGVA--LSVCTLPGQ-VTSDRLGPGKMELGLGI-HGEPGA--AVADLQP 162 (518)
Q Consensus 89 v~KiaGa~A~~G~~l~ev~~~~~~~~~~~~t~gva--l~~c~~P~~-~~~~~l~~~e~E~G~Gi-HgEpG~--~~~~~~~ 162 (518)
+..-|-.++++|.|++||.+..++..+++++.=+- |..=.-=|+ .+.--+=.+-+-|=-=+ +.+-|. -..+..+
T Consensus 146 lv~~Aa~l~~~G~s~eeI~~~l~~~~~~~~~~f~v~~L~~L~kGGRis~~~a~ig~lL~IKPIl~~~~~G~l~~~~KvRg 225 (298)
T 3jr7_A 146 IALKVQQCEKAGMTFEEVVESVECYIEEQHTYFVLENLDTLRKNGRLTGIKSLVAGALNIKPIMGSTPQGTICQKEKARG 225 (298)
T ss_dssp HHHHHHHHHHTTCCHHHHHHHHHHHHHHCCEEEECSCCHHHHHTTCSTTCCC--CCCTTEEEEEEECTTSCEEEEEEEES
T ss_pred HHHHHHHHHHcCCCHHHHHHHHHHHHhhCeEEEEeCChHHHHhCCeehHHHHHHHhhcCcEEEEEEccCCeEEEeeecCC
Confidence 66666789999999999999999999988876331 111111111 01100111112222223 244553 2356667
Q ss_pred HHHHHHHHHHHHHhcccCCCCCCCCCeEEEEEcCCCCChHHHHHHHHHHHHHhhhhhcCC-eEEEeeecccccc
Q 010094 163 VDVVVSHVLKQILSTETNYVPITRGNRVVLMINGLGATPVMELMIAAGKAVPNLQLEHGL-AVERVYTGSFMTS 235 (518)
Q Consensus 163 a~~~v~~ml~~ll~~~~~~~~~~~~~~v~vlvNnlG~ts~~El~~~~~~~~~~L~~~~gi-~v~r~~~G~~~TS 235 (518)
-+..+++|++.+.+. .. +.....+.+.+. +. .|. +.++.+.|+++++. ++.-..+|+-+.+
T Consensus 226 ~kka~~~l~~~~~~~----~~-~~~~~~v~I~h~-~~---~e~---a~~l~~~l~~~~~~~~i~i~~~g~vig~ 287 (298)
T 3jr7_A 226 MKKALVKMADCVAAD----VV-NAGDKILAIAHC-NC---EER---AKEVQRLLKERFAVKSSFIVDTSGISTV 287 (298)
T ss_dssp HHHHHHHHHHHHHHH----CC-SGGGCEEEEEES-SC---HHH---HHHHHHHHHHHCCCSEEEEEECCHHHHH
T ss_pred HHHHHHHHHHHHHHH----hc-cCCCcEEEEEeC-CC---HHH---HHHHHHHHHhhcCCCcEEEEEEccEEEE
Confidence 778888888888764 22 112233334432 22 232 33555666666653 4444456665554
No 11
>2dt8_A DEGV family protein; fatty acid binding, structural genomics, NPPSFA, natio project on protein structural and functional analyses; HET: PLM; 1.48A {Thermus thermophilus}
Probab=56.21 E-value=33 Score=33.64 Aligned_cols=93 Identities=19% Similarity=0.099 Sum_probs=57.2
Q ss_pred CCCCHHHHHHHHHhcc-CCCCeEEEee--ccccccccHHHHHHHHHhcCCcEEEEEecccccCCCCCCCCCccccchhhh
Q 010094 12 ASPPVDSILAGIHAVT-GPMGCLLIVT--NYTGDRLNFGLAAEQAKSEGYKVEIVIVGDDCALPPPRGIAGRRGLAGTIL 88 (518)
Q Consensus 12 aSP~~~~i~~ai~~~~-~~~Gvl~iv~--NYtGD~lnFg~A~e~a~~~g~~v~~v~v~DDva~~~~~~~~gRRG~aG~v~ 88 (518)
+.||+.++.++.+..- .+..||+|-- .-+|=.=|.-+|+++ -..+|. +| | -|..-.|.=+
T Consensus 62 Sqps~~~~~~~f~~l~~~~~~ii~i~lSs~LSGTy~sA~~aa~~---~~~~I~--Vi-D-----------S~~~s~g~g~ 124 (280)
T 2dt8_A 62 SQPSPEDFARVYREALEEADHVLSLHISGKLSGTVQSAELAAQE---FPGRVT--VV-D-----------TQAASLGVGM 124 (280)
T ss_dssp ECCCHHHHHHHHHHHTTSCSEEEEEESCTTTCTHHHHHHHHHTT---STTSEE--EE-E-----------CSCCTHHHHH
T ss_pred CCCCHHHHHHHHHHHHhCCCeEEEEECCCcHhHHHHHHHHHHHh---CCCCEE--EE-C-----------CchhHHHHHH
Confidence 3589999999997764 3355666532 223332233333322 111222 22 2 1223355556
Q ss_pred HHHHHhHHHHcCCCHHHHHHHHHHHHhhhcccc
Q 010094 89 VNKIAGAAAAAGLSLADVAAEAKRASEMVGTMG 121 (518)
Q Consensus 89 v~KiaGa~A~~G~~l~ev~~~~~~~~~~~~t~g 121 (518)
+..-|-.++++|+|++||.+..++..+++++.=
T Consensus 125 ~v~~a~~l~~~G~s~eei~~~l~~~~~~~~~~f 157 (280)
T 2dt8_A 125 MVLRAKELLEEGQSLEAVLAELERLRRDHFVRF 157 (280)
T ss_dssp HHHHHHHHHHHTCCHHHHHHHHHHHHHSCEEEE
T ss_pred HHHHHHHHHHcCCCHHHHHHHHHHHHhhcEEEE
Confidence 666777889999999999999999999888763
No 12
>1pzx_A Hypothetical protein APC36103; structural genomics, two domains containing mixed alpha/beta structures, PSI; HET: PLM; 2.00A {Geobacillus stearothermophilus} SCOP: c.119.1.1
Probab=54.72 E-value=41 Score=33.11 Aligned_cols=97 Identities=13% Similarity=0.088 Sum_probs=65.4
Q ss_pred CCCCHHHHHHHHHhc-cCCCCeEEEee--ccccccccHHHHHHHHHhc--CCcEEEEEecccccCCCCCCCCCccccchh
Q 010094 12 ASPPVDSILAGIHAV-TGPMGCLLIVT--NYTGDRLNFGLAAEQAKSE--GYKVEIVIVGDDCALPPPRGIAGRRGLAGT 86 (518)
Q Consensus 12 aSP~~~~i~~ai~~~-~~~~Gvl~iv~--NYtGD~lnFg~A~e~a~~~--g~~v~~v~v~DDva~~~~~~~~gRRG~aG~ 86 (518)
+.||+.++.++.+.. ..+..||+|-- .-+|=.=+.-+|+++..++ +.+|.+ | | -|..-.|.
T Consensus 63 Sqps~~~~~~~f~~l~~~g~~ii~i~iSs~LSGTy~sA~~aa~~~~ee~~~~~I~V--i-D-----------S~~~s~g~ 128 (289)
T 1pzx_A 63 AQPSPLAMKELFLPYAKENRPCLYIAFSSKLSGTYQTAMAVRSELLDEYPEFRLTI--I-D-----------SKCASLGQ 128 (289)
T ss_dssp ECCCHHHHHHHHHHHHHTTCCEEEEECCTTTCSHHHHHHHHHHHHHHHSTTCCEEE--E-E-----------CCCCHHHH
T ss_pred CCCCHHHHHHHHHHHHhCCCeEEEEECCCchhHHHHHHHHHHHhhHhhCCCCeEEE--E-c-----------CchhhHHH
Confidence 358999999999765 44456777642 3455555666777765432 334332 2 2 12333555
Q ss_pred hhHHHHHhHHHHcCCCHHHHHHHHHHHHhhhcccce
Q 010094 87 ILVNKIAGAAAAAGLSLADVAAEAKRASEMVGTMGV 122 (518)
Q Consensus 87 v~v~KiaGa~A~~G~~l~ev~~~~~~~~~~~~t~gv 122 (518)
-++..-|-.++++|+|++||.+..++..+++++.=+
T Consensus 129 g~~v~~A~~l~~~G~s~eeI~~~l~~~~~~~~~~f~ 164 (289)
T 1pzx_A 129 GLAVMKAVELAKQNTPYNLLCETIESYCRHMEHIFT 164 (289)
T ss_dssp HHHHHHHHHHHHTTCCHHHHHHHHHHHHHTEEEEEE
T ss_pred HHHHHHHHHHHHcCCCHHHHHHHHHHHHhcCEEEEE
Confidence 566666778899999999999999999998887643
No 13
>3ct6_A PTS-dependent dihydroxyacetone kinase, phosphotransferase subunit DHAM; mixed alpha beta structure, glycerol metabolism; 1.10A {Lactococcus lactis} SCOP: c.54.1.2 PDB: 3cr3_C*
Probab=48.10 E-value=29 Score=30.35 Aligned_cols=79 Identities=16% Similarity=0.245 Sum_probs=53.0
Q ss_pred CHHHHHHHHHhccCCCCeEEEeeccccccccHHHHHHHHHhcCCcEEEEEecccccCCCCCCCCCccccchhhhHHHHHh
Q 010094 15 PVDSILAGIHAVTGPMGCLLIVTNYTGDRLNFGLAAEQAKSEGYKVEIVIVGDDCALPPPRGIAGRRGLAGTILVNKIAG 94 (518)
Q Consensus 15 ~~~~i~~ai~~~~~~~Gvl~iv~NYtGD~lnFg~A~e~a~~~g~~v~~v~v~DDva~~~~~~~~gRRG~aG~v~v~KiaG 94 (518)
...+|.++|+.++ +.|||+++== -|=.+|-.++.+... -+|+++ ..| +|.-..-
T Consensus 45 ~~~~i~~ai~~~~-~dgVlvltDL-Ggsp~N~~~al~~~~---~~v~vi------NlP---------------mvega~~ 98 (131)
T 3ct6_A 45 SFDRVMNAIEENE-ADNLLTFFDL-GSARMNLDLVSEMTD---KELTIF------NVP---------------LIEGAYT 98 (131)
T ss_dssp CHHHHHHHHHHSS-CSEEEEEESS-GGGHHHHHHHHHTCS---SEEEEC------CSC---------------HHHHHHH
T ss_pred HHHHHHHHHHhCC-CCCEEEEEeC-CCChHHHHHHHHhcC---CCEEEE------Ehh---------------HHHHHHH
Confidence 4789999999998 6899887765 777788777777532 256554 222 3332222
Q ss_pred H--HHHcCCCHHHHHHHHHHHHhhhcc
Q 010094 95 A--AAAAGLSLADVAAEAKRASEMVGT 119 (518)
Q Consensus 95 a--~A~~G~~l~ev~~~~~~~~~~~~t 119 (518)
| .+..|.+++|+.+.+.....+-||
T Consensus 99 aa~~~~~~~~l~el~~~~~~~~~~~~~ 125 (131)
T 3ct6_A 99 ASALLEAGATFEAIKEQLEKMLIEKRS 125 (131)
T ss_dssp HHHHHHTTCCHHHHHHHHGGGCCCCCC
T ss_pred HHHHhhcCCCHHHHHHHHHHHHhCccc
Confidence 2 346799999998888776555443
No 14
>2bz1_A GTP cyclohydrolase II; riboflavin biosynthesis, catalytic zinc, magnesium; 1.54A {Escherichia coli} SCOP: c.144.1.1 PDB: 2bz0_A
Probab=46.82 E-value=9.1 Score=36.11 Aligned_cols=56 Identities=23% Similarity=0.250 Sum_probs=41.8
Q ss_pred ccccCCCCCCCC---HHHHHHHHHhcc-CCCCeEEEeecc-------------------------------ccccccHHH
Q 010094 4 AAICGDVFASPP---VDSILAGIHAVT-GPMGCLLIVTNY-------------------------------TGDRLNFGL 48 (518)
Q Consensus 4 aav~G~vFaSP~---~~~i~~ai~~~~-~~~Gvl~iv~NY-------------------------------tGD~lnFg~ 48 (518)
-+..||||-|.. -.|+-+|++.+. .+.|||+....= ..|-=+||+
T Consensus 53 ec~tgDvfgs~rcdcg~qL~~Al~~I~~~G~GVlvyLrqegrgigL~~kl~ay~lqd~g~dt~~an~~lg~~~d~R~ygi 132 (196)
T 2bz1_A 53 ECLTGDALFSLRCDCGFQLEAALTQIAEEGRGILLYHRQEGRNIGLLNKIRAYALQDQGYDTVEANHQLGFAADERDFTL 132 (196)
T ss_dssp CCHHHHTSCCSSCSHHHHHHHHHHHHHHHTSEEEEEECCHHHHTCHHHHHHHHHHHHTTCCHHHHHHHTTCCSCCCCTHH
T ss_pred cCChHHHhCCCCCCChHHHHHHHHHHHHhCCEEEEEECCCCcchhHHHHHHHHhhhccCCcccccccccCCCCccccHHH
Confidence 456799999984 569999999987 466999887421 125568888
Q ss_pred HHHHHHhcCCc
Q 010094 49 AAEQAKSEGYK 59 (518)
Q Consensus 49 A~e~a~~~g~~ 59 (518)
+++..+.-|++
T Consensus 133 gAqIL~dLGV~ 143 (196)
T 2bz1_A 133 CADMFKLLGVN 143 (196)
T ss_dssp HHHHHHHTTCC
T ss_pred HHHHHHHcCCC
Confidence 88888888864
No 15
>3b48_A Uncharacterized protein; enterococcus faecalis V583, structural genomics, PSI-2, PROT structure initiative; 2.21A {Enterococcus faecalis} SCOP: c.54.1.2
Probab=40.36 E-value=55 Score=28.43 Aligned_cols=77 Identities=21% Similarity=0.214 Sum_probs=52.7
Q ss_pred CHHHHHHHHHhccCCCCeEEEeeccccccccHHHHHHHHHhc-CCcEEEEEecccccCCCCCCCCCccccchhhhHHHHH
Q 010094 15 PVDSILAGIHAVTGPMGCLLIVTNYTGDRLNFGLAAEQAKSE-GYKVEIVIVGDDCALPPPRGIAGRRGLAGTILVNKIA 93 (518)
Q Consensus 15 ~~~~i~~ai~~~~~~~Gvl~iv~NYtGD~lnFg~A~e~a~~~-g~~v~~v~v~DDva~~~~~~~~gRRG~aG~v~v~Kia 93 (518)
...+|.++|+.++.+.|||+++== -|=.+|-.++.+....+ .-+|+++ ..| +|.+..
T Consensus 50 ~~~~i~~ai~~~~~~dgVlvltDL-Ggsp~N~~~~~~~~~~~~~~~v~vv------NlP---------------mv~~~l 107 (135)
T 3b48_A 50 DPMKIIDTINEADSDREFLIFADL-GSAVLSSELAFDMLEEDQQKHYHLV------DAP---------------LVEGAF 107 (135)
T ss_dssp CHHHHHHHHHHSCSSCEEEEEECS-HHHHHHHHHHHHHSCHHHHTTEEEC------CSC---------------HHHHHH
T ss_pred HHHHHHHHHHhcCCCCCEEEEEeC-CCChhHHHHHHHHhcccccCCEEEE------EHH---------------HHHHHH
Confidence 578999999999998999998765 67778877887766432 2256653 222 455544
Q ss_pred hH--HHHcCCCHHHHHHHHHHH
Q 010094 94 GA--AAAAGLSLADVAAEAKRA 113 (518)
Q Consensus 94 Ga--~A~~G~~l~ev~~~~~~~ 113 (518)
-| .+..|.+++|+.+.+...
T Consensus 108 ~aa~~~~~~~~l~el~~~a~~~ 129 (135)
T 3b48_A 108 ASAITAGVSDDLTQILAEAQNA 129 (135)
T ss_dssp HHHHHHC-CCCHHHHHHHHHTC
T ss_pred HHHHHhhcCCCHHHHHHHHHHH
Confidence 33 345699999998877643
No 16
>3djh_A Macrophage migration inhibitory factor; homotrimer, cytokine, inflammatory response, isomerase, phosphoprotein; 1.25A {Homo sapiens} SCOP: d.80.1.3 PDB: 1ca7_A* 1ljt_A* 2ooh_A* 2ooz_A* 3b9s_A* 2oow_A* 3ce4_A 3dji_A* 3ijg_A* 3ijj_A* 3smb_A* 3smc_A* 3u18_A* 4f2k_A* 1gd0_A* 1gcz_A* 3jsf_A* 3jsg_A* 3jtu_A* 3l5p_A* ...
Probab=40.04 E-value=18 Score=30.32 Aligned_cols=40 Identities=13% Similarity=0.085 Sum_probs=35.8
Q ss_pred EEEEEcCCCCChHHHHHHHHHHHHHhhhhhcCCeEEEeee
Q 010094 190 VVLMINGLGATPVMELMIAAGKAVPNLQLEHGLAVERVYT 229 (518)
Q Consensus 190 v~vlvNnlG~ts~~El~~~~~~~~~~L~~~~gi~v~r~~~ 229 (518)
..+-|..+|+++..+---++..+.+.|++.+||.+.|+|+
T Consensus 57 a~~~v~sig~~~~~~n~~~s~~i~~~l~~~Lgi~~~riyI 96 (114)
T 3djh_A 57 ALCSLHSIGKIGGAQNRSYSKLLCGLLAERLRISPDRVYI 96 (114)
T ss_dssp EEEEEEESSCCSHHHHHHHHHHHHHHHHHHHCCCGGGEEE
T ss_pred EEEEEEEccCCCHHHHHHHHHHHHHHHHHHhCcCcceEEE
Confidence 4556889999999777889999999999999999999998
No 17
>3b64_A Macrophage migration inhibitory factor-like protein; cytokine, MIF, LM1740MIF, lmmif, unknown function; 1.03A {Leishmania major}
Probab=37.92 E-value=24 Score=29.31 Aligned_cols=42 Identities=14% Similarity=0.218 Sum_probs=36.7
Q ss_pred eEEEEEcCCCCChHHHHHHHHHHHHHhhhhhcCCeEEEeeec
Q 010094 189 RVVLMINGLGATPVMELMIAAGKAVPNLQLEHGLAVERVYTG 230 (518)
Q Consensus 189 ~v~vlvNnlG~ts~~El~~~~~~~~~~L~~~~gi~v~r~~~G 230 (518)
-+.+=|...|+.+..+.--+++++.+.|++.+|+.+.|+|+=
T Consensus 57 ~~~i~i~~~~g~~~eqk~~l~~~i~~~l~~~lgi~~~~v~I~ 98 (112)
T 3b64_A 57 VACVRVEALGGYGPSEPEKVTSIVTAAITKECGIVADRIFVL 98 (112)
T ss_dssp CEEEEEECTTCCCTTHHHHHHHHHHHHHHHHHCCCGGGEEEE
T ss_pred EEEEEEEEcCCCCHHHHHHHHHHHHHHHHHHhCcCcceEEEE
Confidence 355668899999988888999999999999999999999873
No 18
>1uiz_A MIF, macrophage migration inhibitory factor; cytokine, tautomerase; 2.50A {Xenopus laevis} SCOP: d.80.1.3
Probab=37.33 E-value=24 Score=29.33 Aligned_cols=41 Identities=15% Similarity=0.071 Sum_probs=36.1
Q ss_pred eEEEEEcCCCCChHHHHHHHHHHHHHhhhhhcCCeEEEeee
Q 010094 189 RVVLMINGLGATPVMELMIAAGKAVPNLQLEHGLAVERVYT 229 (518)
Q Consensus 189 ~v~vlvNnlG~ts~~El~~~~~~~~~~L~~~~gi~v~r~~~ 229 (518)
-+.+=|..+|+.+..+.-.+++++.+.|++.+|+.+.|+||
T Consensus 57 ~~~v~i~~~~g~~~eqk~~l~~~i~~~l~~~lgi~~~~v~I 97 (115)
T 1uiz_A 57 CAVCSLCSIGKIGGPQNKSYTKLLCDILTKQLNIPANRVYI 97 (115)
T ss_dssp CEEEEEEESSCCSHHHHHHHHHHHHHHHHHHHCCCGGGEEE
T ss_pred eEEEEEEEecCCCHHHHHHHHHHHHHHHHHHhCcCcceEEE
Confidence 35566888999998888899999999999999999999887
No 19
>3fwu_A Macrophage migration inhibitory factor-like protein; homotrimer, tautomerase, cytokine; 1.80A {Leishmania major}
Probab=36.61 E-value=22 Score=31.04 Aligned_cols=41 Identities=15% Similarity=0.239 Sum_probs=36.2
Q ss_pred EEEEEcCCCCChHHHHHHHHHHHHHhhhhhcCCeEEEeeec
Q 010094 190 VVLMINGLGATPVMELMIAAGKAVPNLQLEHGLAVERVYTG 230 (518)
Q Consensus 190 v~vlvNnlG~ts~~El~~~~~~~~~~L~~~~gi~v~r~~~G 230 (518)
+.+-|..+|+.+..+--.+++.+.+.|++.+||.+.|+|+=
T Consensus 79 a~v~i~sig~~~~e~n~~~s~~i~~~l~~~LgI~~~riyI~ 119 (133)
T 3fwu_A 79 ACVRVEALGGYGPSEPEKVTSIVTAAITKECGIVADRIFVL 119 (133)
T ss_dssp EEEEEECTTCCCTTHHHHHHHHHHHHHHHHHCCCGGGEEEE
T ss_pred EEEEEEEcCCCCHHHHHHHHHHHHHHHHHHhCcChhhEEEE
Confidence 55668899999887778899999999999999999999983
No 20
>4dh4_A MIF; trimer, isomerase; 1.82A {Toxoplasma gondii}
Probab=36.28 E-value=19 Score=30.11 Aligned_cols=40 Identities=15% Similarity=0.230 Sum_probs=35.5
Q ss_pred EEEEEcCCCCChHHHHHHHHHHHHHhhhhhcCCeEEEeee
Q 010094 190 VVLMINGLGATPVMELMIAAGKAVPNLQLEHGLAVERVYT 229 (518)
Q Consensus 190 v~vlvNnlG~ts~~El~~~~~~~~~~L~~~~gi~v~r~~~ 229 (518)
..+-|..+|+.+...---+...+.+.|++.+|+.+.|+|+
T Consensus 58 a~v~i~~ig~~~~e~~~~l~~~i~~~l~~~Lgi~~~riyI 97 (114)
T 4dh4_A 58 AFIRVASIGGITSSTNCKIAAALSAACERHLGVPKNRIYT 97 (114)
T ss_dssp EEEEEEEESCCCHHHHHHHHHHHHHHHHHHHCCCGGGEEE
T ss_pred EEEEEEEEcCCCHHHHHHHHHHHHHHHHHHhCcCcccEEE
Confidence 5566888999999777789999999999999999999997
No 21
>1mgp_A Hypothetical protein TM841; two domain structure with mixed alpha/beta structures in BOTH domains, structural genomics; HET: PLM; 2.00A {Thermotoga maritima} SCOP: c.119.1.1 PDB: 1vpv_A*
Probab=35.89 E-value=1.3e+02 Score=29.97 Aligned_cols=93 Identities=13% Similarity=0.122 Sum_probs=57.8
Q ss_pred CCCCHHHHHHHHHhcc-CC-CCeEEEee--ccccccccHHHHHHHHHhcCCcEEEEEecccccCCCCCCCCCccccchhh
Q 010094 12 ASPPVDSILAGIHAVT-GP-MGCLLIVT--NYTGDRLNFGLAAEQAKSEGYKVEIVIVGDDCALPPPRGIAGRRGLAGTI 87 (518)
Q Consensus 12 aSP~~~~i~~ai~~~~-~~-~Gvl~iv~--NYtGD~lnFg~A~e~a~~~g~~v~~v~v~DDva~~~~~~~~gRRG~aG~v 87 (518)
+.||+.++.++.+..- .+ ..||+|-- .-+|=.=+.-+|+++. +.+| .+|+- +..-.|.-
T Consensus 89 SqPs~~~~~e~f~~l~~~g~d~Ii~I~iSs~LSGTy~sA~~Aa~~~---~~~I--~ViDS------------~~~s~g~g 151 (313)
T 1mgp_A 89 SQPSVEDFKKRYLKYKEEDYDVVLVLTLSSKLSGTYNSAVLASKEV---DIPV--YVVDT------------LLASGAIP 151 (313)
T ss_dssp ECCCHHHHHHHHHHHHHTTCSEEEEEESCTTTCSHHHHHHHHHHHS---SSCE--EEEEC------------SCCGGGTH
T ss_pred CCcCHHHHHHHHHHHHHcCCCeEEEEECCccHhHHHHHHHHHHhcC---CCeE--EEEeC------------CcchHHHH
Confidence 3589999999997653 33 25666642 2344333444444432 2222 22221 22234445
Q ss_pred hHHHHHhHHHHcCCCHHHHHHHHHHHHh--hhcccc
Q 010094 88 LVNKIAGAAAAAGLSLADVAAEAKRASE--MVGTMG 121 (518)
Q Consensus 88 ~v~KiaGa~A~~G~~l~ev~~~~~~~~~--~~~t~g 121 (518)
++..-|-.++++|+|++||.+..++..+ ++++.=
T Consensus 152 ~lv~~Aa~l~~~G~s~eeI~~~l~~~~~~~~~~~~f 187 (313)
T 1mgp_A 152 LPARVAREMLENGATIEEVLKKLDERMKNKDFKAIF 187 (313)
T ss_dssp HHHHHHHHHHHTTCCHHHHHHHHHHHHHTTCEEEEE
T ss_pred HHHHHHHHHHhcCCCHHHHHHHHHHHhhhCceEEEE
Confidence 5666677889999999999999999999 877653
No 22
>3fys_A Protein DEGV; fatty acid-binding, EDD fold, fatty acid-binding protein; HET: PLM; 2.50A {Bacillus subtilis}
Probab=35.70 E-value=1.5e+02 Score=29.54 Aligned_cols=93 Identities=14% Similarity=0.134 Sum_probs=58.3
Q ss_pred CCCCHHHHHHHHHhccC-CCCeEEEe--eccccccccHHHHHHHHHhcCCcEEEEEecccccCCCCCCCCCccccchhhh
Q 010094 12 ASPPVDSILAGIHAVTG-PMGCLLIV--TNYTGDRLNFGLAAEQAKSEGYKVEIVIVGDDCALPPPRGIAGRRGLAGTIL 88 (518)
Q Consensus 12 aSP~~~~i~~ai~~~~~-~~Gvl~iv--~NYtGD~lnFg~A~e~a~~~g~~v~~v~v~DDva~~~~~~~~gRRG~aG~v~ 88 (518)
+-||+.++.++.+..-. ...||+|- ..-+|=.=+.-+|+++. .+.+ +.+| | -|..-.|.-+
T Consensus 96 SqPs~~~~~~~fe~l~~~~~~Ii~I~iSS~LSGTy~sA~~Aa~~~--~~~~--I~Vi-D-----------S~~~s~g~g~ 159 (315)
T 3fys_A 96 SQPPIGELVALYEELGKSYDAVISIHLSSGISGTFSSAAAADSMV--DNID--VYPF-D-----------SEISCLAQGF 159 (315)
T ss_dssp ECCCHHHHHHHHHHHTTTCSEEEEEESCTTTCSHHHHHHHGGGGC--SSCE--EEEE-E-----------CSSCHHHHHH
T ss_pred CCCCHHHHHHHHHHHHhcCCcEEEEeCCCcHhHHHHHHHHHHHhC--CCCC--EEEE-C-----------CchhHHHHHH
Confidence 35899999999977643 45566664 33444333333333221 2222 2222 2 1233445556
Q ss_pred HHHHHhHHHHcCC-CHHHHHHHHHHHHhhhccc
Q 010094 89 VNKIAGAAAAAGL-SLADVAAEAKRASEMVGTM 120 (518)
Q Consensus 89 v~KiaGa~A~~G~-~l~ev~~~~~~~~~~~~t~ 120 (518)
+..-|-.++++|+ |++||.+..++..+++++.
T Consensus 160 lv~~Aa~l~~~G~~s~eeI~~~l~~~~~~~~~~ 192 (315)
T 3fys_A 160 YALKAAELIKNGASSPEDIIKELEEMKKTVRAY 192 (315)
T ss_dssp HHHHHHHHHHTTCCCHHHHHHHHHHHTTTCEEE
T ss_pred HHHHHHHHHHcCCCCHHHHHHHHHHHHhccEEE
Confidence 6666778999999 9999999999999887765
No 23
>2os5_A Acemif; macrophage migration inhibitory factor, cytokine, nematode,; 1.60A {Ancylostoma ceylanicum} PDB: 3rf4_A* 3rf5_A*
Probab=34.65 E-value=32 Score=28.83 Aligned_cols=42 Identities=17% Similarity=0.131 Sum_probs=36.8
Q ss_pred CeEEEEEcCCCCChHHHHHHHHHHHHHhhhhhcCCeEEEeee
Q 010094 188 NRVVLMINGLGATPVMELMIAAGKAVPNLQLEHGLAVERVYT 229 (518)
Q Consensus 188 ~~v~vlvNnlG~ts~~El~~~~~~~~~~L~~~~gi~v~r~~~ 229 (518)
+-+.+=|..+|+.+..+.-.+++++.+.|++.+|+.+.|+|+
T Consensus 56 ~~~~i~I~~~~g~~~eqk~~l~~~i~~~l~~~lgi~~~~v~I 97 (119)
T 2os5_A 56 PVAVIKVESIGALSADDNIRHTQKITQFCQDTLKLPKDKVII 97 (119)
T ss_dssp SCEEEEEEESSCCCHHHHHHHHHHHHHHHHHHHCCCGGGEEE
T ss_pred CeEEEEEEEecCCCHHHHHHHHHHHHHHHHHHhCcCcccEEE
Confidence 345566888999998888899999999999999999999887
No 24
>1hfo_A Migration inhibitory factor; tautomerase; 1.65A {Trichinella spiralis} SCOP: d.80.1.3
Probab=34.15 E-value=26 Score=29.06 Aligned_cols=40 Identities=15% Similarity=0.187 Sum_probs=35.7
Q ss_pred EEEEEcCCCCChHHHHHHHHHHHHHhhhhhcCCeEEEeee
Q 010094 190 VVLMINGLGATPVMELMIAAGKAVPNLQLEHGLAVERVYT 229 (518)
Q Consensus 190 v~vlvNnlG~ts~~El~~~~~~~~~~L~~~~gi~v~r~~~ 229 (518)
+.+=|..+||.+..+.-.+++++.+.|++.+|+.+.|+|+
T Consensus 57 ~~i~i~~~~g~~~eqk~~l~~~i~~~l~~~lgi~~~~v~I 96 (113)
T 1hfo_A 57 AFGTLMSIGGIEPSRNRDHSAKLFDHLNTKLGIPKNRMYI 96 (113)
T ss_dssp EEEEEEESSSCSHHHHHHHHHHHHHHHHHHHCCCGGGEEE
T ss_pred EEEEEEEecCCCHHHHHHHHHHHHHHHHHHhCcCcCeEEE
Confidence 5566888999998888899999999999999999999887
No 25
>3lup_A DEGV family protein; PSI-2, MCSG, structural genomics, fatty acid binding, protei structure initiative; HET: ELA; 2.65A {Streptococcus agalactiae} SCOP: c.119.1.0
Probab=32.16 E-value=1.2e+02 Score=29.74 Aligned_cols=195 Identities=11% Similarity=0.069 Sum_probs=102.5
Q ss_pred CCCCHHHHHHHHHhccC-C-CCeEEEe--eccccccccHHHHHHHHHhcCCcEEEEEecccccCCCCCCCCCccccchhh
Q 010094 12 ASPPVDSILAGIHAVTG-P-MGCLLIV--TNYTGDRLNFGLAAEQAKSEGYKVEIVIVGDDCALPPPRGIAGRRGLAGTI 87 (518)
Q Consensus 12 aSP~~~~i~~ai~~~~~-~-~Gvl~iv--~NYtGD~lnFg~A~e~a~~~g~~v~~v~v~DDva~~~~~~~~gRRG~aG~v 87 (518)
+.||+.++.++.+..-. + ..||+|- ..-+|=.=+.-+|+|+. .+.+| .|=| -|..-.|.-
T Consensus 65 Sqps~~~~~~~f~~l~~~g~d~ii~i~iSs~LSGTy~sA~~a~~~~--~~~~I---~ViD-----------S~~~s~g~g 128 (285)
T 3lup_A 65 SQPSLAELDDLLCQLEKEGYTHVLGLFIAAGISGFWQNIQFLIEEH--PNLTI---AFPD-----------TKITSAPQG 128 (285)
T ss_dssp CCCCHHHHHHHHHHHHHTTCCEEEECCSCGGGCTHHHHHTTHHHHC--TTSEE---ECCC-----------CCCCHHHHH
T ss_pred CCCCHHHHHHHHHHHHHcCCCeEEEEeCCCchhHHHHHHHHHHHhC--CCCCE---EEEc-----------CCchHHHHH
Confidence 45899999999976643 3 3566654 33445433333443321 12222 2222 233445666
Q ss_pred hHHHHHhHHHHcCCCHHHHHHHHHHHHhhhcccceec--ccc--------------ccCCCCCCCCcC-CCceeEecccc
Q 010094 88 LVNKIAGAAAAAGLSLADVAAEAKRASEMVGTMGVAL--SVC--------------TLPGQVTSDRLG-PGKMELGLGIH 150 (518)
Q Consensus 88 ~v~KiaGa~A~~G~~l~ev~~~~~~~~~~~~t~gval--~~c--------------~~P~~~~~~~l~-~~e~E~G~GiH 150 (518)
++..-|-.++++|+|++||.+..++..+++++.=+-= ..= ++-.=+|-..+. +|+++
T Consensus 129 ~~v~~A~~l~~~G~s~eeI~~~l~~~~~~~~~~f~v~~L~~L~kGGRis~~~a~ig~lL~IKPIl~~~~~G~l~------ 202 (285)
T 3lup_A 129 NLVRNALMCSREGMDFDVIVNKIQSQIEKIEGFIVVNDLNHLVKGGRLSNGSAIIGNLLSIKPVLHFNEEGKIV------ 202 (285)
T ss_dssp HHHHHHHHHHTTTCCHHHHHHHHHHHHTTCEEEEECSCTHHHHHHTCBTTHHHHHHHHTTSCCEEEECTTSCEE------
T ss_pred HHHHHHHHHHHcCCCHHHHHHHHHHHHhhcEEEEEECChHHHhhCCCccHHHHHHHHhhCcEEEEEEccCceEE------
Confidence 6666777899999999999999999998887653210 000 000112333333 33333
Q ss_pred CCCCcccccCCCHHHHHHHHHHHHHhcccCCCCCCCCCeEEEEEcCCCCChHHHHHHHHHHHHHhhhhhcC-CeEEEeee
Q 010094 151 GEPGAAVADLQPVDVVVSHVLKQILSTETNYVPITRGNRVVLMINGLGATPVMELMIAAGKAVPNLQLEHG-LAVERVYT 229 (518)
Q Consensus 151 gEpG~~~~~~~~a~~~v~~ml~~ll~~~~~~~~~~~~~~v~vlvNnlG~ts~~El~~~~~~~~~~L~~~~g-i~v~r~~~ 229 (518)
-..+..+-+..+++|++.+.+. .. ....++ .+.+. + . .|. +.++.+.|++++. ..+.-..+
T Consensus 203 -----~~~KvRg~kka~~~l~~~~~~~----~~-~~~~~v-~i~h~-~-~--~e~---a~~l~~~l~~~~~~~~i~i~~i 264 (285)
T 3lup_A 203 -----VYEKVRTEKKALKRLAEIVKEM----TA-DGEYDI-AIIHS-R-A--QDK---AEQLYNLLAKAGLKDDLEIVSF 264 (285)
T ss_dssp -----EEECCSSHHHHHHHHHHHHHHH----GG-GSCEEE-EEEES-S-C--HHH---HHHHHHHHHHTTCGGGEEEEEC
T ss_pred -----EeeecCCHHHHHHHHHHHHHHh----hc-CCCcEE-EEEeC-C-C--HHH---HHHHHHHHHhhCCCCeEEEEEE
Confidence 2355666777788888877653 22 112233 33332 2 2 232 2344555555533 23444556
Q ss_pred cccccccCCCc-ceEEEe
Q 010094 230 GSFMTSLDMAG-FSISIM 246 (518)
Q Consensus 230 G~~~TSl~m~G-fSiTll 246 (518)
|+-+.+==.+| +.|..+
T Consensus 265 g~vig~H~Gpg~igi~~~ 282 (285)
T 3lup_A 265 GGVIATHLGEGAVAFGIT 282 (285)
T ss_dssp CHHHHHHHCTTCEEEEEE
T ss_pred CcEEEEEecCCeEEEEEE
Confidence 66555443444 444443
No 26
>2xcz_A Possible ATLS1-like light-inducible protein; cytokine, tautomerase, immune system, cyanobacterium; 1.64A {Prochlorococcus marinus}
Probab=31.03 E-value=29 Score=28.85 Aligned_cols=41 Identities=12% Similarity=0.251 Sum_probs=36.0
Q ss_pred eEEEEEcCCCCChHHHHHHHHHHHHHhhhhhcCCeEEEeee
Q 010094 189 RVVLMINGLGATPVMELMIAAGKAVPNLQLEHGLAVERVYT 229 (518)
Q Consensus 189 ~v~vlvNnlG~ts~~El~~~~~~~~~~L~~~~gi~v~r~~~ 229 (518)
-+.+=|..+|+.+..+.-.+++++.+.|++.+|+.+.|+||
T Consensus 57 ~~~v~i~~~~g~t~eqk~~l~~~i~~~l~~~lgi~~~~v~I 97 (115)
T 2xcz_A 57 TCYVEVKSIGALDGSRTQEVSELVCGHIEQNLGIPADRIYI 97 (115)
T ss_dssp CEEEEEEESSCCCTTHHHHHHHHHHHHHHHHHCCCGGGEEE
T ss_pred EEEEEEEEecCCCHHHHHHHHHHHHHHHHHHhCcCcccEEE
Confidence 35556788999999999999999999999999999999887
No 27
>3fwt_A Macrophage migration inhibitory factor-like protein; homotrimer, tautomerase, cytokine; 1.90A {Leishmania major}
Probab=30.65 E-value=23 Score=30.90 Aligned_cols=41 Identities=15% Similarity=0.259 Sum_probs=35.3
Q ss_pred EEEEEcCCCCChHHHHHHHHHHHHHhhhhhcCCeEEEeeec
Q 010094 190 VVLMINGLGATPVMELMIAAGKAVPNLQLEHGLAVERVYTG 230 (518)
Q Consensus 190 v~vlvNnlG~ts~~El~~~~~~~~~~L~~~~gi~v~r~~~G 230 (518)
+.+-|..+|+.+..+--.++.++.+.|++.+||.+.|+|+=
T Consensus 79 a~v~v~sig~~~~e~n~~~s~~i~~~l~~~LgI~~~rvyI~ 119 (133)
T 3fwt_A 79 AYVRVESWGEYAPSKPKMMTPRIAAAITKECGIPAERIYVF 119 (133)
T ss_dssp EEEEEEEEECCCTHHHHHHHHHHHHHHHHHHCCCGGGEEEE
T ss_pred EEEEEEECCCCCHHHHHHHHHHHHHHHHHHhCcChhhEEEE
Confidence 45557778888887788899999999999999999999983
No 28
>2lnd_A De novo designed protein, PFK fold; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Artificial gene}
Probab=29.35 E-value=83 Score=25.56 Aligned_cols=51 Identities=18% Similarity=0.341 Sum_probs=32.1
Q ss_pred ccCCCCcccccCCCHHHHHHHHHHHHHhcccCCCCCCCCCeEEEEEcCCCCChHHHHHHHHHHH
Q 010094 149 IHGEPGAAVADLQPVDVVVSHVLKQILSTETNYVPITRGNRVVLMINGLGATPVMELMIAAGKA 212 (518)
Q Consensus 149 iHgEpG~~~~~~~~a~~~v~~ml~~ll~~~~~~~~~~~~~~v~vlvNnlG~ts~~El~~~~~~~ 212 (518)
-|+=||.......+..++ +.+++.+. +.|...+|+||+ .|+-..+-+-+++
T Consensus 23 khnypgryirtatssqdi-rdiiksmk---------dngkplvvfvng---asqndvnefqnea 73 (112)
T 2lnd_A 23 KHNYPGRYIRTATSSQDI-RDIIKSMK---------DNGKPLVVFVNG---ASQNDVNEFQNEA 73 (112)
T ss_dssp HHHSCTTTEEEECSHHHH-HHHHHHHT---------TCCSCEEEEECS---CCHHHHHHHHHHH
T ss_pred hcCCCCceeeeccchhhH-HHHHHHHH---------hcCCeEEEEecC---cccccHHHHHHHH
Confidence 388999875555555554 33344432 347899999998 5665555555544
No 29
>3t5s_A Gilaa.00834.A, macrophage migration inhibitory factor; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 2.30A {Giardia lamblia}
Probab=28.79 E-value=21 Score=31.19 Aligned_cols=41 Identities=15% Similarity=0.097 Sum_probs=31.9
Q ss_pred eEEEEEcCCCCChHHHHHHHHHHHHHhhhhhcCCeEEEeee
Q 010094 189 RVVLMINGLGATPVMELMIAAGKAVPNLQLEHGLAVERVYT 229 (518)
Q Consensus 189 ~v~vlvNnlG~ts~~El~~~~~~~~~~L~~~~gi~v~r~~~ 229 (518)
-+.+-|..+|+.+..+---+++.+.+.|++.+||.+.|+|+
T Consensus 78 ~a~v~i~sig~~t~e~n~~~s~~i~~~l~~~Lgi~~~riyI 118 (135)
T 3t5s_A 78 CCFVDFYCIGVISQAKNPSISAAITGCLTQHFKVKPERVYI 118 (135)
T ss_dssp CEEEEEECCC-----CCHHHHHHHHHHHHHHHCCCGGGEEE
T ss_pred EEEEEEEEEEEEeccCCchHHHHHHHHHHHhcccCccEEEE
Confidence 35566889999988888889999999999999999999998
No 30
>2wkb_A Macrophage migration inhibitory factor; cytokine; HET: CME; 1.78A {Plasmodium berghei} PDB: 3gad_A 3gac_A 2wkf_A*
Probab=26.78 E-value=30 Score=29.38 Aligned_cols=41 Identities=17% Similarity=0.182 Sum_probs=31.6
Q ss_pred eEEEEEcCCCCChHHHHHHHHHHHHHhhhhhcCCeEEEeee
Q 010094 189 RVVLMINGLGATPVMELMIAAGKAVPNLQLEHGLAVERVYT 229 (518)
Q Consensus 189 ~v~vlvNnlG~ts~~El~~~~~~~~~~L~~~~gi~v~r~~~ 229 (518)
-+.+=|..+||.+..+.-.+++++.+.|.+.+|+.+.|+||
T Consensus 57 ~~~v~I~~~~g~t~eqk~~l~~~i~~~l~~~lgi~~~~v~I 97 (125)
T 2wkb_A 57 YCFVRLTSIGGINRSNNSLLADKITKILSNHLSVKPRRVYI 97 (125)
T ss_dssp CEEEEEECC-----CTHHHHHHHHHHHHHHHHCCCGGGEEE
T ss_pred cEEEEEEECCCCCHHHHHHHHHHHHHHHHHHhCcCcceEEE
Confidence 35566889999999888899999999999999999999887
No 31
>2yxd_A Probable cobalt-precorrin-6Y C(15)-methyltransfer [decarboxylating]; alpha and beta protein (A/B) class; HET: MES; 2.30A {Methanocaldococcus jannaschii}
Probab=23.28 E-value=2e+02 Score=24.23 Aligned_cols=56 Identities=18% Similarity=0.217 Sum_probs=39.2
Q ss_pred cccccCCCCCCCCHHHHHHHHHhccCCCCeEEEeeccccccccHHHHHHHHHhcCCcEEEEEec
Q 010094 3 TAAICGDVFASPPVDSILAGIHAVTGPMGCLLIVTNYTGDRLNFGLAAEQAKSEGYKVEIVIVG 66 (518)
Q Consensus 3 ~aav~G~vFaSP~~~~i~~ai~~~~~~~Gvl~iv~NYtGD~lnFg~A~e~a~~~g~~v~~v~v~ 66 (518)
|.+++..+ +...+++..++.+ +.|.|++......+ +.-..+..+..|.+++.+-+.
T Consensus 102 D~i~~~~~---~~~~~~l~~~~~~--~gG~l~~~~~~~~~---~~~~~~~l~~~g~~~~~~~~~ 157 (183)
T 2yxd_A 102 NKAFIGGT---KNIEKIIEILDKK--KINHIVANTIVLEN---AAKIINEFESRGYNVDAVNVF 157 (183)
T ss_dssp SEEEECSC---SCHHHHHHHHHHT--TCCEEEEEESCHHH---HHHHHHHHHHTTCEEEEEEEE
T ss_pred cEEEECCc---ccHHHHHHHHhhC--CCCEEEEEeccccc---HHHHHHHHHHcCCeEEEEEee
Confidence 44555555 6778888888887 88888887744333 445677778889888877543
No 32
>4fbl_A LIPS lipolytic enzyme; thermostable, structural genomics, enzyme function initiativ structural proteomics in europe, spine; HET: SPD; 1.99A {Unidentified} PDB: 4fbm_A
Probab=22.72 E-value=85 Score=29.34 Aligned_cols=32 Identities=19% Similarity=0.223 Sum_probs=24.9
Q ss_pred CeEEEEEcCCCCChHHHHHHHHHHHHHhhhhhcCCeEE
Q 010094 188 NRVVLMINGLGATPVMELMIAAGKAVPNLQLEHGLAVE 225 (518)
Q Consensus 188 ~~v~vlvNnlG~ts~~El~~~~~~~~~~L~~~~gi~v~ 225 (518)
..-|||+-|+|+++.. ++.+.++|.++ |+.|.
T Consensus 51 ~~~VlllHG~~~s~~~-----~~~la~~La~~-Gy~Vi 82 (281)
T 4fbl_A 51 RIGVLVSHGFTGSPQS-----MRFLAEGFARA-GYTVA 82 (281)
T ss_dssp SEEEEEECCTTCCGGG-----GHHHHHHHHHT-TCEEE
T ss_pred CceEEEECCCCCCHHH-----HHHHHHHHHHC-CCEEE
Confidence 3448999999998763 45677889888 98876
No 33
>2aal_A Malonate semialdehyde decarboxylase; tautomerase superfamily, beta-alpha-beta, homotrimeric, LYAS; 1.65A {Pseudomonas pavonaceae} SCOP: d.80.1.6 PDB: 2aag_A 2aaj_A
Probab=21.60 E-value=66 Score=27.34 Aligned_cols=39 Identities=13% Similarity=0.091 Sum_probs=32.6
Q ss_pred EEEEEcCCCCChHHHHHHHHHHHHHhhhhhcCCeEEEeee
Q 010094 190 VVLMINGLGATPVMELMIAAGKAVPNLQLEHGLAVERVYT 229 (518)
Q Consensus 190 v~vlvNnlG~ts~~El~~~~~~~~~~L~~~~gi~v~r~~~ 229 (518)
+.+-|. ..|.+..+.-.+++++.+.|.+.+|+.+.++||
T Consensus 67 ~~I~i~-~~grt~eqK~~l~~~l~~~l~~~lg~~~~~v~I 105 (131)
T 2aal_A 67 VLLTVI-SRPRSEEQKVCFYKLLTGALERDCGISPDDVIV 105 (131)
T ss_dssp EEEEEE-ESCCCHHHHHHHHHHHHHHHHHHHCCCGGGEEE
T ss_pred EEEEEE-eCCCCHHHHHHHHHHHHHHHHHHhCcCcccEEE
Confidence 445577 667788888899999999999988999988876
No 34
>3pnl_B PTS-dependent dihydroxyacetone kinase, ADP-bindin DHAL; structural genomics, montreal-kingston bacterial structural initiative, BSGI; HET: ADP; 2.20A {Escherichia coli} SCOP: a.208.1.0 PDB: 2btd_A*
Probab=20.93 E-value=5.1e+02 Score=24.06 Aligned_cols=115 Identities=10% Similarity=0.015 Sum_probs=70.2
Q ss_pred CCCCHHHHHHHHHHHHHHhcCCchhhHHHHHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCcchhhhhH
Q 010094 357 PLNDAAETVNEIGASIRRVMGGTSGILYHIFCKAAYAKLKASSKSGITSKQWAEALEASIAAVSKYGGATAGYRTMLDAL 436 (518)
Q Consensus 357 ~~~~~~~~l~~ia~a~~~~~GGtSG~Lys~~f~~~a~~l~~~~~~~~~~~~~~~al~~a~~~i~~~g~A~~GDkTMlDaL 436 (518)
+..|-..-+..-..++..........=.+.+|..++..+...- --.+--.|...|..+.+.+.. +.++.-..+.++|
T Consensus 35 GDGD~G~nm~~g~~av~~~l~~~~~~~~~~~l~~~~~~~~~~~-gG~SG~L~~~~f~~~a~~l~~--~~~~~~~~~~~al 111 (211)
T 3pnl_B 35 GDADHGLNMNRGFSKVVEKLPAIADKDIGFILKNTGMTLLSSV-GGASGPLFGTFFIRAAQATQA--RQSLTLEELYQMF 111 (211)
T ss_dssp SCSCHHHHHHHHHHHHHHHSGGGTTSCHHHHHHHHHHHHHTTT-CTTHHHHHHHHHHHHHHHHCS--CSEEEHHHHHHHH
T ss_pred CCCcHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHcC-CCcHHHHHHHHHHHHHHHhcc--CCCCCHHHHHHHH
Confidence 3445555454444444443322211225677888888776421 122345578888887777643 3344556788888
Q ss_pred HHHHHHHHHHH--hC-CCCHHHHHHHHHHHHHHHHHhCcch
Q 010094 437 IPAAAVLQERL--SA-GIDPSTAFILSSEAAIAGAESTKHM 474 (518)
Q Consensus 437 ~Pa~~al~~~~--~~-~~~~~~~l~~A~~aA~~gae~T~~m 474 (518)
..+++.+++.. +. ..++.++|.-++++.++..+...++
T Consensus 112 ~~a~~~i~~~g~a~~GdkTmlD~l~pa~~a~~~~~~~~~~~ 152 (211)
T 3pnl_B 112 RDGADGVISRGKAEPGDKTMCDVWVPVVESLRQSSEQNLSV 152 (211)
T ss_dssp HHHHHHHHHHHCCCTTSSSTHHHHHHHHHHHHHHHHTTCCH
T ss_pred HHHHHHHHHhcCCCCCCChHHHhHHHHHHHHHHHHhcCCCH
Confidence 88888887532 11 3678899999999888877655543
No 35
>3ihu_A Transcriptional regulator, GNTR family; YP_298823.1, DNA binding protein, structural genomics, joint for structural genomics, JCSG; HET: MSE; 1.92A {Ralstonia eutropha}
Probab=20.09 E-value=1.4e+02 Score=27.36 Aligned_cols=64 Identities=17% Similarity=0.239 Sum_probs=46.7
Q ss_pred CCHHHHHHHHHHHHHhcccCCCCCCCCCeEEEEEcCCCCChHHHHHH----HHHHHHHhhhhhcCCeEEEeeeccccccc
Q 010094 161 QPVDVVVSHVLKQILSTETNYVPITRGNRVVLMINGLGATPVMELMI----AAGKAVPNLQLEHGLAVERVYTGSFMTSL 236 (518)
Q Consensus 161 ~~a~~~v~~ml~~ll~~~~~~~~~~~~~~v~vlvNnlG~ts~~El~~----~~~~~~~~L~~~~gi~v~r~~~G~~~TSl 236 (518)
+-.+.+.+.+.+.|++- .+++|+++- .+ ...|.+- -.|++++.|+.. |+-..+...|.|++.+
T Consensus 16 ~~~~~v~~~l~~~I~~g-----~l~pG~~L~--E~-----~La~~lgVSRtpVREAl~~L~~e-Glv~~~~~~G~~V~~~ 82 (222)
T 3ihu_A 16 SASDTVFFGIMSGLELG-----TFVPGQRLV--ET-----DLVAHFGVGRNSVREALQRLAAE-GIVDLQRHRGAVIRRL 82 (222)
T ss_dssp CHHHHHHHHHHHHHHHT-----SSCTTCEEC--HH-----HHHHHHTCCHHHHHHHHHHHHHT-TSEEECSTTCEEECCC
T ss_pred cHHHHHHHHHHHHHHhC-----CCCCCCccC--HH-----HHHHHHCCCHHHHHHHHHHHHHC-CCEEEecCCCeEEecC
Confidence 34566888888888873 577898753 21 1222222 579999999999 9988888899999876
Q ss_pred C
Q 010094 237 D 237 (518)
Q Consensus 237 ~ 237 (518)
+
T Consensus 83 ~ 83 (222)
T 3ihu_A 83 S 83 (222)
T ss_dssp C
T ss_pred C
Confidence 4
Done!