BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 010097
(518 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3QZ1|A Chain A, Crystal Structure Of Bovine Steroid Of 21-Hydroxylase
(P450c21)
pdb|3QZ1|B Chain B, Crystal Structure Of Bovine Steroid Of 21-Hydroxylase
(P450c21)
pdb|3QZ1|C Chain C, Crystal Structure Of Bovine Steroid Of 21-Hydroxylase
(P450c21)
pdb|3QZ1|D Chain D, Crystal Structure Of Bovine Steroid Of 21-Hydroxylase
(P450c21)
Length = 496
Score = 125 bits (313), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 111/443 (25%), Positives = 193/443 (43%), Gaps = 45/443 (10%)
Query: 60 PLIGNLLQLKEKKPHMTFTRWAEVYGPIYSIKTGASTMIVLNSADVAKEAMVTRYPSIST 119
PL+ L L + + + GP+Y ++ G ++VLNS +EAM+ ++ +
Sbjct: 32 PLVPGFLHLLQPNLPIHLLSLTQKLGPVYRLRLGLQEVVVLNSKRTIEEAMIRKWVDFAG 91
Query: 120 RKLSNALKMLTSNKCM-VATSDYDEFHKMAKRCLLTNVLGGNAQKRHRIHRDTMMENMST 178
R + K L S +C ++ DY K K+ + +L G R + ++ ++
Sbjct: 92 RPQIPSYK-LVSQRCQDISLGDYSLLWKAHKKLTRSALLLGT-----RSSMEPWVDQLTQ 145
Query: 179 QFHAHIMDNPLQLVNFRKIFESELFAVSMKQAVGKVVESIYVKELGSTLSKDEVFKILVL 238
+F + V +K F ++ G +++ F V
Sbjct: 146 EFCERMRVQAGAPVTIQKEFSLLTCSIICYLTFGNKEDTLV-----------HAFHDCVQ 194
Query: 239 DIME--GAIEVDWRDFFPYLRWVPNKGVEMKIQRLCTRRQAVMDVLISEAKSRIASGQEL 296
D+M+ + D P+LR+ PN G+ ++++ R +++ + K + +GQ
Sbjct: 195 DLMKTWDHWSIQILDMVPFLRFFPNPGL-WRLKQAIENRDHMVEKQLRRHKESMVAGQWR 253
Query: 297 NCYVDHLLSEVK---------SLTEQQISMLLWEPIIETSDTTLVTTEWAMYELAKDPMR 347
+ D++L V L E + M + + I ++TT T WA+ L P
Sbjct: 254 D-MTDYMLQGVGRQRVEEGPGQLLEGHVHMSVVDLFIGGTETTASTLSWAVAFLLHHPEI 312
Query: 348 QDRLFQKIQ----SVCRSNKFTEENIAQVPYLGAVFHETLRKYSPAPIVPLRFAHEDTE- 402
Q RL +++ ++ T ++ A++P L A E LR P+VPL H T
Sbjct: 313 QRRLQEELDRELGPGASCSRVTYKDRARLPLLNATIAEVLRL---RPVVPLALPHRTTRP 369
Query: 403 --IGGYFIPAGSEIAINIYGCNMDKKQWENPDEWKPERFLDGQYDPADLYKTMAFGTGKR 460
I GY IP G + N+ G ++D+ WE P E++P+RFL+ +P+ L AFG G R
Sbjct: 370 SSIFGYDIPEGMVVIPNLQGAHLDETVWEQPHEFRPDRFLEPGANPSAL----AFGCGAR 425
Query: 461 VCAGSLQASLIACTAIGRLVQEF 483
VC G A L + RL+Q F
Sbjct: 426 VCLGESLARLELFVVLARLLQAF 448
>pdb|4I8V|A Chain A, Human Cytochrome P450 1a1 In Complex With
Alpha-naphthoflavone
pdb|4I8V|B Chain B, Human Cytochrome P450 1a1 In Complex With
Alpha-naphthoflavone
pdb|4I8V|C Chain C, Human Cytochrome P450 1a1 In Complex With
Alpha-naphthoflavone
pdb|4I8V|D Chain D, Human Cytochrome P450 1a1 In Complex With
Alpha-naphthoflavone
Length = 491
Score = 113 bits (282), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 105/456 (23%), Positives = 191/456 (41%), Gaps = 28/456 (6%)
Query: 53 PEVPGRLPLIGNLLQLKEKKPHMTFTRWAEVYGPIYSIKTGASTMIVLNSADVAKEAMVT 112
P P PLIG++L L K PH+ +R ++ YG + I+ G++ ++VL+ D ++A+V
Sbjct: 13 PPGPWGWPLIGHMLTLG-KNPHLALSRMSQQYGDVLQIRIGSTPVVVLSGLDTIRQALVR 71
Query: 113 RYPSISTRKLSNALKMLTSNKCMVATSDYDEFHKMAKRCLLTNVLGGNAQKRHRIHRDTM 172
+ R ++++ + M + D +R L N K I D
Sbjct: 72 QGDDFKGRPDLYTFTLISNGQSMSFSPDSGPVWAARRR------LAQNGLKSFSIASDPA 125
Query: 173 MENMSTQFHAHIMDNPLQLVN-FRKIFESELFAVSMKQAVGKVVESIYVKELGSTLSKDE 231
+ S H+ L++ +++ + V V I G +
Sbjct: 126 -SSTSCYLEEHVSKEAEVLISTLQELMAGPGHFNPYRYVVVSVTNVICAICFGRRYDHNH 184
Query: 232 VFKILVLDIMEGAIEV----DWRDFFPYLRWVPNKGVEMKIQRLCTRRQAVMDVLISEAK 287
+ ++++ EV + DF P LR++PN + + L + + M ++ E
Sbjct: 185 QELLSLVNLNNNFGEVVGSGNPADFIPILRYLPNPSLN-AFKDLNEKFYSFMQKMVKEHY 243
Query: 288 SRIASGQELNCYVDHLLSEVK----------SLTEQQISMLLWEPIIETSDTTLVTTEWA 337
G + D L+ + L++++I ++ + DT W+
Sbjct: 244 KTFEKGH-IRDITDSLIEHCQEKQLDENANVQLSDEKIINIVLDLFGAGFDTVTTAISWS 302
Query: 338 MYELAKDPMRQDRLFQKIQSVC-RSNKFTEENIAQVPYLGAVFHETLRKYSPAPIVPLRF 396
+ L +P Q ++ +++ +V RS + + + +PY+ A ET R S P
Sbjct: 303 LMYLVMNPRVQRKIQEELDTVIGRSRRPRLSDRSHLPYMEAFILETFRHSSFVPFTIPHS 362
Query: 397 AHEDTEIGGYFIPAGSEIAINIYGCNMDKKQWENPDEWKPERFL--DGQYDPADLYKTMA 454
DT + G++IP G + +N + N D+K W NP E+ PERFL DG D K +
Sbjct: 363 TTRDTSLKGFYIPKGRCVFVNQWQINHDQKLWVNPSEFLPERFLTPDGAIDKVLSEKVII 422
Query: 455 FGTGKRVCAGSLQASLIACTAIGRLVQEFKWNLREG 490
FG GKR C G A + L+Q ++++ G
Sbjct: 423 FGMGKRKCIGETIARWEVFLFLAILLQRVEFSVPLG 458
>pdb|2HI4|A Chain A, Crystal Structure Of Human Microsomal P450 1a2 In Complex
With Alpha-Naphthoflavone
Length = 495
Score = 113 bits (282), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 110/476 (23%), Positives = 204/476 (42%), Gaps = 46/476 (9%)
Query: 53 PEVPGRLPLIGNLLQLKEKKPHMTFTRWAEVYGPIYSIKTGASTMIVLNSADVAKEAMVT 112
P P PL+G++L L K PH+ +R ++ YG + I+ G++ ++VL+ D ++A+V
Sbjct: 18 PPEPWGWPLLGHVLTLG-KNPHLALSRMSQRYGDVLQIRIGSTPVLVLSRLDTIRQALVR 76
Query: 113 RYPSISTRKLSNALKMLTSNKCMVATSD----YDEFHKMAKRCLLTNVLGGNAQKRHRIH 168
+ R ++T + + ++D + ++A+ L T + + +
Sbjct: 77 QGDDFKGRPDLYTSTLITDGQSLTFSTDSGPVWAARRRLAQNALNTFSIASDPASSSSCY 136
Query: 169 RDTMMENMSTQFHA------HIMDNPLQLVNFRKIFESELFAVSMKQAVGKVVESIYVKE 222
+ E++S + A +M P + ++ VS+ +G + + E
Sbjct: 137 ---LEEHVSKEAKALISRLQELMAGPGHFDPYNQV------VVSVANVIGAMCFGQHFPE 187
Query: 223 LGSTLSKDEVFKIL--VLDIMEGAIEVDWRDFFPYLRWVPNKGVEMKIQRLCTRRQAVMD 280
S DE+ ++ + +E A + DFFP LR++PN +QR Q +
Sbjct: 188 -----SSDEMLSLVKNTHEFVETASSGNPLDFFPILRYLPNPA----LQRFKAFNQRFLW 238
Query: 281 VL----------ISEAKSRIASGQELNCYVDHLLSEVKSLTEQQISMLLWEPIIETSDTT 330
L + R +G + + +++I L+ + DT
Sbjct: 239 FLQKTVQEHYQDFDKNSVRDITGALFKHSKKGPRASGNLIPQEKIVNLVNDIFGAGFDTV 298
Query: 331 LVTTEWAMYELAKDPMRQDRLFQKIQSVC-RSNKFTEENIAQVPYLGAVFHETLRKYSPA 389
W++ L P Q ++ +++ +V R + + Q+PYL A ET R S
Sbjct: 299 TTAISWSLMYLVTKPEIQRKIQKELDTVIGRERRPRLSDRPQLPYLEAFILETFRHSSFL 358
Query: 390 PIVPLRFAHEDTEIGGYFIPAGSEIAINIYGCNMDKKQWENPDEWKPERFL--DGQYDPA 447
P DT + G++IP + +N + N D + WE+P E++PERFL DG
Sbjct: 359 PFTIPHSTTRDTTLNGFYIPKKCCVFVNQWQVNHDPELWEDPSEFRPERFLTADGTAINK 418
Query: 448 DLY-KTMAFGTGKRVCAGSLQASLIACTAIGRLVQEFKWNLREGEEESVDTV-GLT 501
L K M FG GKR C G + A + L+Q+ ++++ G + + + GLT
Sbjct: 419 PLSEKMMLFGMGKRRCIGEVLAKWEIFLFLAILLQQLEFSVPPGVKVDLTPIYGLT 474
>pdb|3RUK|A Chain A, Human Cytochrome P450 Cyp17a1 In Complex With Abiraterone
pdb|3RUK|B Chain B, Human Cytochrome P450 Cyp17a1 In Complex With Abiraterone
pdb|3RUK|C Chain C, Human Cytochrome P450 Cyp17a1 In Complex With Abiraterone
pdb|3RUK|D Chain D, Human Cytochrome P450 Cyp17a1 In Complex With Abiraterone
pdb|3SWZ|A Chain A, Human Cytochrome P450 17a1 In Complex With Tok-001
pdb|3SWZ|B Chain B, Human Cytochrome P450 17a1 In Complex With Tok-001
pdb|3SWZ|C Chain C, Human Cytochrome P450 17a1 In Complex With Tok-001
pdb|3SWZ|D Chain D, Human Cytochrome P450 17a1 In Complex With Tok-001
Length = 494
Score = 109 bits (272), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 109/449 (24%), Positives = 198/449 (44%), Gaps = 43/449 (9%)
Query: 59 LPLIGNLLQL-KEKKPHMTFTRWAEVYGPIYSIKTGASTMIVLNSADVAKEAMVTRYPSI 117
LPL+G+L L + H F + + YGPIYS++ G T +++ +AKE ++ +
Sbjct: 16 LPLVGSLPFLPRHGHMHNNFFKLQKKYGPIYSVRMGTKTTVIVGHHQLAKEVLIKKGKDF 75
Query: 118 STRKLSNALKMLTSNKCMVATSDYDEFHKMAKRCLLTN--VLGGNAQKRHRI---HRDTM 172
S R L + ++N+ +A +D ++ +R + + QK +I T+
Sbjct: 76 SGRPQMATLDIASNNRKGIAFADSGAHWQLHRRLAMATFALFKDGDQKLEKIICQEISTL 135
Query: 173 MENMSTQFHAHIMDNPLQLVNFRKIFESELFAVSMKQAVGKV-VESIYVKELGSTLSKDE 231
+ ++T I + V + F S K ++ V Y + + LSKD
Sbjct: 136 CDMLATHNGQSIDISFPVFVAVTNVISLICFNTSYKNGDPELNVIQNYNEGIIDNLSKDS 195
Query: 232 VFKILVLDIMEGAIEVDWRDFFPYLRWVPNKGVEMKIQRLCTRRQAVMDVLISEAKSRIA 291
+ D P+L+ PNK +E K++ R +++ ++ K +
Sbjct: 196 LV-----------------DLVPWLKIFPNKTLE-KLKSHVKIRNDLLNKILENYKEKFR 237
Query: 292 SGQELNCYVDHLL-----SEVKSLTEQQISMLLWEPIIETS---------DTTLVTTEWA 337
S N +D L+ S+ + Q S LL + I T+ +TT +W
Sbjct: 238 SDSITNM-LDTLMQAKMNSDNGNAGPDQDSELLSDNHILTTIGDIFGAGVETTTSVVKWT 296
Query: 338 MYELAKDPMRQDRLFQKI-QSVCRSNKFTEENIAQVPYLGAVFHETLRKYSPAPIVPLRF 396
+ L +P + +L+++I Q+V S T + ++ L A E LR AP++
Sbjct: 297 LAFLLHNPQVKKKLYEEIDQNVGFSRTPTISDRNRLLLLEATIREVLRLRPVAPMLIPHK 356
Query: 397 AHEDTEIGGYFIPAGSEIAINIYGCNMDKKQWENPDEWKPERFLD--GQYDPADLYKTMA 454
A+ D+ IG + + G+E+ IN++ + ++K+W PD++ PERFL+ G + +
Sbjct: 357 ANVDSSIGEFAVDKGTEVIINLWALHHNEKEWHQPDQFMPERFLNPAGTQLISPSVSYLP 416
Query: 455 FGTGKRVCAGSLQASLIACTAIGRLVQEF 483
FG G R C G + A + L+Q F
Sbjct: 417 FGAGPRSCIGEILARQELFLIMAWLLQRF 445
>pdb|3E4E|A Chain A, Human Cytochrome P450 2e1 In Complex With The Inhibitor 4-
Methylpyrazole
pdb|3E4E|B Chain B, Human Cytochrome P450 2e1 In Complex With The Inhibitor 4-
Methylpyrazole
pdb|3E6I|A Chain A, Human Cytochrome P450 2e1 In Complex With The Inhibitor
Indazole
pdb|3E6I|B Chain B, Human Cytochrome P450 2e1 In Complex With The Inhibitor
Indazole
pdb|3GPH|A Chain A, Human Cytochrome P450 2e1 In Complex With
Omega-Imidazolyl-Decanoic Acid
pdb|3GPH|B Chain B, Human Cytochrome P450 2e1 In Complex With
Omega-Imidazolyl-Decanoic Acid
pdb|3KOH|A Chain A, Cytochrome P450 2e1 With Omega-Imidazolyl Octanoic Acid
pdb|3KOH|B Chain B, Cytochrome P450 2e1 With Omega-Imidazolyl Octanoic Acid
pdb|3LC4|A Chain A, Human Cytochrome P450 2e1 In Complex With
Omega-Imidazolyl-Dodecanoic Acid
pdb|3LC4|B Chain B, Human Cytochrome P450 2e1 In Complex With
Omega-Imidazolyl-Dodecanoic Acid
pdb|3T3Z|A Chain A, Human Cytochrome P450 2e1 In Complex With Pilocarpine
pdb|3T3Z|B Chain B, Human Cytochrome P450 2e1 In Complex With Pilocarpine
pdb|3T3Z|C Chain C, Human Cytochrome P450 2e1 In Complex With Pilocarpine
pdb|3T3Z|D Chain D, Human Cytochrome P450 2e1 In Complex With Pilocarpine
Length = 476
Score = 106 bits (264), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 115/468 (24%), Positives = 195/468 (41%), Gaps = 72/468 (15%)
Query: 48 KLPPVPEVPGRLPLIGNLLQLKEKKPHMTFTRWAEVYGPIYSIKTGASTMIVLNSADVAK 107
KLPP P P LP+IGNL QL+ K +FTR A+ +GP++++ G+ M+V++ K
Sbjct: 10 KLPPGP-FP--LPIIGNLFQLELKNIPKSFTRLAQRFGPVFTLYVGSQRMVVMHGYKAVK 66
Query: 108 EAMVTRYPSISTRKLSNALKMLTSNKCMVATSDYDEFHKMAKRCLLTNVLGGNAQKRHRI 167
EA++ S R D FH R ++ N G K R
Sbjct: 67 EALLDYKDEFSGR------------------GDLPAFHAHRDRGIIFN--NGPTWKDIRR 106
Query: 168 HRDTMMENMS---------TQFHAHIMDNPLQLVNFRKIFESELFAVSMKQAVGKVVESI 218
T + N Q AH + L+ + + L + + + +
Sbjct: 107 FSLTTLRNYGMGKQGNESRIQREAHFLLEALRKTQGQPFDPTFLIGCAPCNVIADI---L 163
Query: 219 YVKELGSTLSKDEVFKILVLDIMEG--AIEVDW----RDFFPYLRWVPNKGVEMKIQRLC 272
+ K DE F L+ E + W +F +L ++P R
Sbjct: 164 FRKHFDYN---DEKFLRLMYLFNENFHLLSTPWLQLYNNFPSFLHYLPGS------HRKV 214
Query: 273 TRRQAVMDVLISEAKSRIASGQELNC---YVDHLLSEVKS--------LTEQQISMLLWE 321
+ A + +SE + NC D LL E++ T I++ + +
Sbjct: 215 IKNVAEVKEYVSERVKEHHQSLDPNCPRDLTDCLLVEMEKEKHSAERLYTMDGITVTVAD 274
Query: 322 PIIETSDTTLVTTEWAMYELAKDPMRQDRLFQKIQSVCRSNKFTE-ENIAQVPYLGAVFH 380
++TT T + + L K P +++L ++I V ++ ++ ++PY+ AV H
Sbjct: 275 LFFAGTETTSTTLRYGLLILMKYPEIEEKLHEEIDRVIGPSRIPAIKDRQEMPYMDAVVH 334
Query: 381 ETLRKYSPAPIVPLRFAHE---DTEIGGYFIPAGSEIAINIYGCNMDKKQWENPDEWKPE 437
E R + +VP HE DT GY IP G+ + + D +++ +P+++KPE
Sbjct: 335 EIQRFIT---LVPSNLPHEATRDTIFRGYLIPKGTVVVPTLDSVLYDNQEFPDPEKFKPE 391
Query: 438 RFL--DGQYDPADLYKTMAFGTGKRVCAGSLQASLIACTAIGRLVQEF 483
FL +G++ +D +K F TGKRVCAG A + + ++Q F
Sbjct: 392 HFLNENGKFKYSDYFK--PFSTGKRVCAGEGLARMELFLLLCAILQHF 437
>pdb|3CZH|A Chain A, Crystal Structure Of Cyp2r1 In Complex With Vitamin D2
pdb|3CZH|B Chain B, Crystal Structure Of Cyp2r1 In Complex With Vitamin D2
Length = 481
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 104/432 (24%), Positives = 179/432 (41%), Gaps = 45/432 (10%)
Query: 73 PHMTFTRWAEVYGPIYSIKTGASTMIVLNSADVAKEAMVTRYPSISTRKLSNALKMLTSN 132
PH+ + ++VYG I+S+ G + +VLN DV KE +V + + R
Sbjct: 36 PHVYMRKQSQVYGEIFSLDLGGISTVVLNGYDVVKECLVHQSEIFADRP----------- 84
Query: 133 KCMVATSDYDEFHKMAKRCLLTNVLGGNAQKRHR---IHRDTMMENMSTQFHAHIMDNPL 189
C+ F KM K L N G HR ++ F + I++
Sbjct: 85 -CLPL------FMKMTKMGGLLNSRYGRGWVDHRRLAVNSFRYFGYGQKSFESKILEETK 137
Query: 190 QLVNFRKIFESELFAVSMKQAVGKVVESIY-VKELGSTLSKDEVFKILVLDIMEGAIE-- 246
+ + ++ F KQ + V +I + G + ++ ++++ +E
Sbjct: 138 FFNDAIETYKGRPF--DFKQLITNAVSNITNLIIFGERFTYEDTDFQHMIELFSENVELA 195
Query: 247 ----VDWRDFFPYLRWVPNKGVEMKIQRLCTRRQAVMDVL--ISEAKSRIASGQELNCYV 300
V + FP++ +P K Q+L V D L + E S Q +V
Sbjct: 196 ASASVFLYNAFPWIGILPFG----KHQQLFRNAAVVYDFLSRLIEKASVNRKPQLPQHFV 251
Query: 301 DHLLSEV--------KSLTEQQISMLLWEPIIETSDTTLVTTEWAMYELAKDPMRQDRLF 352
D L E+ + +++ + + E II ++TT WA+ +A P Q ++
Sbjct: 252 DAYLDEMDQGKNDPSSTFSKENLIFSVGELIIAGTETTTNVLRWAILFMALYPNIQGQVQ 311
Query: 353 QKIQSVCRSN-KFTEENIAQVPYLGAVFHETLRKYSPAPIVPLRFAHEDTEIGGYFIPAG 411
++I + N K + ++ ++PY AV HE LR + P+ ED + GY IP G
Sbjct: 312 KEIDLIMGPNGKPSWDDKCKMPYTEAVLHEVLRFCNIVPLGIFHATSEDAVVRGYSIPKG 371
Query: 412 SEIAINIYGCNMDKKQWENPDEWKPERFLDGQYDPADLYKTMAFGTGKRVCAGSLQASLI 471
+ + N+Y + D+K W +P+ + PERFLD A + F G+R C G A +
Sbjct: 372 TTVITNLYSVHFDEKYWRDPEVFHPERFLDSSGYFAKKEALVPFSLGRRHCLGEHLARME 431
Query: 472 ACTAIGRLVQEF 483
L+Q F
Sbjct: 432 MFLFFTALLQRF 443
>pdb|3C6G|A Chain A, Crystal Structure Of Cyp2r1 In Complex With Vitamin D3
pdb|3C6G|B Chain B, Crystal Structure Of Cyp2r1 In Complex With Vitamin D3
pdb|3DL9|A Chain A, Crystal Structure Of Cyp2r1 In Complex With
1-Alpha-Hydroxy- Vitamin D2
pdb|3DL9|B Chain B, Crystal Structure Of Cyp2r1 In Complex With
1-Alpha-Hydroxy- Vitamin D2
Length = 479
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 103/436 (23%), Positives = 180/436 (41%), Gaps = 45/436 (10%)
Query: 73 PHMTFTRWAEVYGPIYSIKTGASTMIVLNSADVAKEAMVTRYPSISTRKLSNALKMLTSN 132
PH+ + ++VYG I+S+ G + +VLN DV KE +V + ++
Sbjct: 36 PHVYMRKQSQVYGEIFSLDLGGISTVVLNGYDVVKECLV------------HQSEIFADR 83
Query: 133 KCMVATSDYDEFHKMAKRCLLTNVLGGNAQKRHR---IHRDTMMENMSTQFHAHIMDNPL 189
C+ F KM K L N G HR ++ F + I++
Sbjct: 84 PCLPL------FMKMTKMGGLLNSRYGRGWVDHRRLAVNSFRYFGYGQKSFESKILEETK 137
Query: 190 QLVNFRKIFESELFAVSMKQAVGKVVESIY-VKELGSTLSKDEVFKILVLDIMEGAIE-- 246
+ + ++ F KQ + V +I + G + ++ ++++ +E
Sbjct: 138 FFNDAIETYKGRPF--DFKQLITNAVSNITNLIIFGERFTYEDTDFQHMIELFSENVELA 195
Query: 247 ----VDWRDFFPYLRWVPNKGVEMKIQRLCTRRQAVMDVL--ISEAKSRIASGQELNCYV 300
V + FP++ +P K Q+L V D L + E S Q +V
Sbjct: 196 ASASVFLYNAFPWIGILPFG----KHQQLFRNAAVVYDFLSRLIEKASVNRKPQLPQHFV 251
Query: 301 DHLLSEV--------KSLTEQQISMLLWEPIIETSDTTLVTTEWAMYELAKDPMRQDRLF 352
D L E+ + +++ + + E II ++TT WA+ +A P Q ++
Sbjct: 252 DAYLDEMDQGKNDPSSTFSKENLIFSVGELIIAGTETTTNVLRWAILFMALYPNIQGQVQ 311
Query: 353 QKIQSVCRSN-KFTEENIAQVPYLGAVFHETLRKYSPAPIVPLRFAHEDTEIGGYFIPAG 411
++I + N K + ++ ++PY AV HE LR + P+ ED + GY IP G
Sbjct: 312 KEIDLIMGPNGKPSWDDKCKMPYTEAVLHEVLRFCNIVPLGIFHATSEDAVVRGYSIPKG 371
Query: 412 SEIAINIYGCNMDKKQWENPDEWKPERFLDGQYDPADLYKTMAFGTGKRVCAGSLQASLI 471
+ + N+Y + D+K W +P+ + PERFLD A + F G+R C G A +
Sbjct: 372 TTVITNLYSVHFDEKYWRDPEVFHPERFLDSSGYFAKKEALVPFSLGRRHCLGEHLARME 431
Query: 472 ACTAIGRLVQEFKWNL 487
L+Q F +
Sbjct: 432 MFLFFTALLQRFHLHF 447
>pdb|2P85|A Chain A, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|2P85|B Chain B, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|2P85|C Chain C, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|2P85|D Chain D, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|2P85|E Chain E, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|2P85|F Chain F, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|3T3S|A Chain A, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|B Chain B, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|C Chain C, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|D Chain D, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|E Chain E, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|F Chain F, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|G Chain G, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|H Chain H, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|4EJG|A Chain A, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|B Chain B, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|C Chain C, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|D Chain D, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|E Chain E, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|F Chain F, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|G Chain G, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|H Chain H, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJH|A Chain A, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|B Chain B, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|C Chain C, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|D Chain D, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|E Chain E, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|F Chain F, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|G Chain G, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|H Chain H, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJI|A Chain A, Human Cytochrome P450 2a13 In Complex With Two Molecules
Of 4- (Methylnitrosamino)-1-(3-Puridyl)-1-Butanone
Length = 476
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 111/461 (24%), Positives = 191/461 (41%), Gaps = 53/461 (11%)
Query: 48 KLPPVPEVPGRLPLIGNLLQLKEKKPHMTFTRWAEVYGPIYSIKTGASTMIVLNSADVAK 107
KLPP P P LP IGN LQL ++ + + + +E YGP+++I G ++VL D K
Sbjct: 10 KLPPGP-TP--LPFIGNYLQLNTEQMYNSLMKISERYGPVFTIHLGPRRVVVLCGHDAVK 66
Query: 108 EAMVTRYPSISTRKLSNALKMLTSNKCMVATSDYDEFHKMAKRCLLTNVLGGNAQKRHRI 167
EA+V + S R L VA S+ E K +R + + G KR
Sbjct: 67 EALVDQAEEFSGRGEQATFDWLFKGYG-VAFSN-GERAKQLRRFSIATLRGFGVGKRGIE 124
Query: 168 HRDTMMENMSTQFHAHIMDNPLQLVNFRKIFESELFAVSMKQAVGKVVESIYVKELGSTL 227
R Q A + + L+ + I + F + + V V+ SI G
Sbjct: 125 ER--------IQEEAGFLIDALRGTHGANI-DPTFF---LSRTVSNVISSIV---FGDRF 169
Query: 228 SKDEVFKILVLDIMEGAIEVD-------WRDFFPYLRWVPNKGVEMKIQRLCTRRQAVMD 280
++ + +L +M G+ + + F ++ +P Q+ Q + D
Sbjct: 170 DYEDKEFLSLLRMMLGSFQFTATSTGQLYEMFSSVMKHLPGPQ-----QQAFKELQGLED 224
Query: 281 VLIS--EAKSRIASGQELNCYVDHLL-----SEVKSLTE---QQISMLLWEPIIETSDTT 330
+ E R ++D L E TE + + M ++T
Sbjct: 225 FIAKKVEHNQRTLDPNSPRDFIDSFLIRMQEEEKNPNTEFYLKNLVMTTLNLFFAGTETV 284
Query: 331 LVTTEWAMYELAKDPMRQDRLFQKIQSVCRSNKFTE-ENIAQVPYLGAVFHETLRKYSPA 389
T + L K P + ++ ++I V N+ + E+ A++PY AV HE R
Sbjct: 285 STTLRYGFLLLMKHPEVEAKVHEEIDRVIGKNRQPKFEDRAKMPYTEAVIHEIQRF---G 341
Query: 390 PIVPLRFAH---EDTEIGGYFIPAGSEIAINIYGCNMDKKQWENPDEWKPERFLD--GQY 444
++P+ AH +DT+ +F+P G+E+ + D + + NP ++ P+ FLD GQ+
Sbjct: 342 DMLPMGLAHRVNKDTKFRDFFLPKGTEVFPMLGSVLRDPRFFSNPRDFNPQHFLDKKGQF 401
Query: 445 DPADLYKTMAFGTGKRVCAGSLQASLIACTAIGRLVQEFKW 485
+D + + F GKR C G A + ++Q F++
Sbjct: 402 KKSDAF--VPFSIGKRYCFGEGLARMELFLFFTTIMQNFRF 440
>pdb|3PM0|A Chain A, Structural Characterization Of The Complex Between Alpha-
Naphthoflavone And Human Cytochrome P450 1b1 (Cyp1b1)
Length = 507
Score = 92.4 bits (228), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 93/434 (21%), Positives = 171/434 (39%), Gaps = 34/434 (7%)
Query: 53 PEVPGRLPLIGNLLQLKEKKPHMTFTRWAEVYGPIYSIKTGASTMIVLNSADVAKEAMVT 112
P P PLIGN + + H++F R A YG ++ I+ G+ ++VLN +A+V
Sbjct: 11 PPGPFAWPLIGNAAAVGQAA-HLSFARLARRYGDVFQIRLGSCPIVVLNGERAIHQALVQ 69
Query: 113 RYPSISTRKLSNALKMLTSNKCMVATSDYDEFHKMAKRC---LLTNVLGGNAQKRHRIHR 169
+ + + R + ++++ + M A Y E K+ +R ++ N + R +
Sbjct: 70 QGSAFADRPSFASFRVVSGGRSM-AFGHYSEHWKVQRRAAHSMMRNFFTRQPRSRQVLEG 128
Query: 170 DTMMENM--------STQFHAHIMDNPLQLVNFRKIFESELFAVSMKQAVGKVVESI-YV 220
+ E + A + PL +V + + F + E + +
Sbjct: 129 HVLSEARELVALLVRGSADGAFLDPRPLTVVAVANVMSAVCFGCRYSHDDPEFRELLSHN 188
Query: 221 KELGSTLSKDEVFKILV-LDIMEGAIEVDWRDFFPYLRWVPNKGVEMKIQRLCTRRQA-- 277
+E G T+ + ++ L + +R+F R N ++ K R C +
Sbjct: 189 EEFGRTVGAGSLVDVMPWLQYFPNPVRTVFREFEQLNRNFSNFILD-KFLRHCESLRPGA 247
Query: 278 ----VMDVLISEAKSRIASGQELNCYVDHLLSEVKSLTEQQISMLLWEPIIETSDTTLVT 333
+MD I A+ + A L + + + + + DT
Sbjct: 248 APRDMMDAFILSAEKKAAGDSH---------GGGARLDLENVPATITDIFGASQDTLSTA 298
Query: 334 TEWAMYELAKDPMRQDRLFQKI-QSVCRSNKFTEENIAQVPYLGAVFHETLRKYSPAPIV 392
+W + + P Q R+ ++ Q V R + +PY+ A +E +R S P+
Sbjct: 299 LQWLLLLFTRYPDVQTRVQAELDQVVGRDRLPCMGDQPNLPYVLAFLYEAMRFSSFVPVT 358
Query: 393 PLRFAHEDTEIGGYFIPAGSEIAINIYGCNMDKKQWENPDEWKPERFL--DGQYDPADLY 450
+T + GY IP + + +N + N D +W NP+ + P RFL DG +
Sbjct: 359 IPHATTANTSVLGYHIPKDTVVFVNQWSVNHDPLKWPNPENFDPARFLDKDGLINKDLTS 418
Query: 451 KTMAFGTGKRVCAG 464
+ M F GKR C G
Sbjct: 419 RVMIFSVGKRRCIG 432
>pdb|1PQ2|A Chain A, Crystal Structure Of Human Drug Metabolizing Cytochrome
P450 2c8
pdb|1PQ2|B Chain B, Crystal Structure Of Human Drug Metabolizing Cytochrome
P450 2c8
pdb|2NNH|A Chain A, Cyp2c8dh Complexed With 2 Molecules Of 9-Cis Retinoic Acid
pdb|2NNH|B Chain B, Cyp2c8dh Complexed With 2 Molecules Of 9-Cis Retinoic Acid
pdb|2NNI|A Chain A, Cyp2c8dh Complexed With Montelukast
pdb|2NNJ|A Chain A, Cyp2c8dh Complexed With Felodipine
pdb|2VN0|A Chain A, Cyp2c8dh Complexed With Troglitazone
Length = 476
Score = 92.4 bits (228), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 114/475 (24%), Positives = 211/475 (44%), Gaps = 50/475 (10%)
Query: 48 KLPPVPEVPGRLPLIGNLLQLKEKKPHMTFTRWAEVYGPIYSIKTGASTMIVLNSADVAK 107
KLPP P LP+IGN+LQ+ K +FT +++VYGP++++ G + ++V + + K
Sbjct: 10 KLPPGPT---PLPIIGNMLQIDVKDICKSFTNFSKVYGPVFTVYFGMNPIVVFHGYEAVK 66
Query: 108 EAMVTRYPSISTRKLSNALKMLTSNKCMVATSDYDEFHKMAKRCLLTNVLGGNAQKRHRI 167
EA++ S R S + +T +++++ + K +R LT + KR
Sbjct: 67 EALIDNGEEFSGRGNSPISQRITKGLGIISSNG--KRWKEIRRFSLTTLRNFGMGKRSIE 124
Query: 168 HRDTMMENMSTQFHAHIMDNPLQLVNFRKIFESELFAVSMKQAVGKVV---ESIYVKELG 224
R Q AH + L+ + + + + VV Y +
Sbjct: 125 DR--------VQEEAHCLVEELRKTKASPCDPTFILGCAPCNVICSVVFQKRFDYKDQNF 176
Query: 225 STLSK--DEVFKILVLDIMEGAIEVDWRDFFPYL-RWVPNKGVEMKIQRLCTRRQAVMDV 281
TL K +E F+IL + + + FP L P G K+ + ++ +
Sbjct: 177 LTLMKRFNENFRIL------NSPWIQVCNNFPLLIDCFP--GTHNKVLKNVALTRSYIRE 228
Query: 282 LISEAKSRIASGQELNCYVDHLLSEVKSLTEQQISMLLWEPIIET--------SDTTLVT 333
+ E ++ + + ++D L +++ + Q S E ++ T ++TT T
Sbjct: 229 KVKEHQASLDVNNPRD-FIDCFLIKMEQEKDNQKSEFNIENLVGTVADLFVAGTETTSTT 287
Query: 334 TEWAMYELAKDPMRQDRLFQKIQSVC-RSNKFTEENIAQVPYLGAVFHETLRKYSPAPIV 392
+ + L K P ++ ++I V R ++ + +PY AV HE +++YS +V
Sbjct: 288 LRYGLLLLLKHPEVTAKVQEEIDHVIGRHRSPCMQDRSHMPYTDAVVHE-IQRYS--DLV 344
Query: 393 PLRFAHE---DTEIGGYFIPAGSEIAINIYGCNMDKKQWENPDEWKPERFLD--GQYDPA 447
P H DT+ Y IP G+ I + D K++ NP+ + P FLD G + +
Sbjct: 345 PTGVPHAVTTDTKFRNYLIPKGTTIMALLTSVLHDDKEFPNPNIFDPGHFLDKNGNFKKS 404
Query: 448 DLYKTMAFGTGKRVCAGSLQASLIACTAIGRLVQEFKWNLREGEE-ESVDTVGLT 501
D + M F GKR+CAG A + + ++Q F NL+ ++ ++++T +T
Sbjct: 405 DYF--MPFSAGKRICAGEGLARMELFLFLTTILQNF--NLKSVDDLKNLNTTAVT 455
>pdb|1TQN|A Chain A, Crystal Structure Of Human Microsomal P450 3a4
Length = 486
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 106/450 (23%), Positives = 189/450 (42%), Gaps = 45/450 (10%)
Query: 56 PGRLPLIGNLLQLKEKKPHMTFTRWAEVYGPIYSIKTGASTMIVLNSADVAKEAMVTR-Y 114
P LP +GN+L K M + YG ++ G ++ + D+ K +V Y
Sbjct: 20 PTPLPFLGNILSY-HKGFCMFDMECHKKYGKVWGFYDGQQPVLAITDPDMIKTVLVKECY 78
Query: 115 PSISTRKLSNALKMLTSNKCMVATSDYDEFHKMAKRCLLTNVLGGNAQKRH----RIHRD 170
+ R+ + + K ++ ++ +E+ ++ R LL+ K + D
Sbjct: 79 SVFTNRRPFGPVGFM---KSAISIAEDEEWKRL--RSLLSPTFTSGKLKEMVPIIAQYGD 133
Query: 171 TMMENMSTQFHAHIMDNPLQLVNFRKIFESELFAVSMKQAVGKVVESIYVKELGSTLSKD 230
++ N+ + + V + +F + V + G ++S+ + +
Sbjct: 134 VLVRNLRREAETG------KPVTLKDVFGAYSMDVITSTSFGVNIDSLNNPQDPFVENTK 187
Query: 231 EVFKILVLDIMEGAIEVDWRDFFPYLRWVPNKGVEMKIQRLCTRRQAVMDVLISEAK--- 287
++ + LD +I V FP+L + +++ +C + V + L K
Sbjct: 188 KLLRFDFLDPFFLSITV-----FPFLIPI------LEVLNICVFPREVTNFLRKSVKRMK 236
Query: 288 -SRIASGQE-----LNCYVDHLLSEV----KSLTEQQISMLLWEPIIETSDTTLVTTEWA 337
SR+ Q+ L +D S+ K+L++ ++ I +TT +
Sbjct: 237 ESRLEDTQKHRVDFLQLMIDSQNSKETESHKALSDLELVAQSIIFIFAGYETTSSVLSFI 296
Query: 338 MYELAKDPMRQDRLFQKIQSVCRSNKF--TEENIAQVPYLGAVFHETLRKYSPAPIVPLR 395
MYELA P Q +L ++I +V NK T + + Q+ YL V +ETLR + P + R
Sbjct: 297 MYELATHPDVQQKLQEEIDAVL-PNKAPPTYDTVLQMEYLDMVVNETLRLF-PIAMRLER 354
Query: 396 FAHEDTEIGGYFIPAGSEIAINIYGCNMDKKQWENPDEWKPERFLDGQYDPADLYKTMAF 455
+D EI G FIP G + I Y + D K W P+++ PERF D D Y F
Sbjct: 355 VCKKDVEINGMFIPKGVVVMIPSYALHRDPKYWTEPEKFLPERFSKKNKDNIDPYIYTPF 414
Query: 456 GTGKRVCAGSLQASLIACTAIGRLVQEFKW 485
G+G R C G A + A+ R++Q F +
Sbjct: 415 GSGPRNCIGMRFALMNMKLALIRVLQNFSF 444
>pdb|3UA1|A Chain A, Crystal Structure Of The Cytochrome
P4503a4-Bromoergocryptine Complex
pdb|3TJS|A Chain A, Crystal Structure Of The Complex Between Human Cytochrome
P450 3a4 And Desthiazolylmethyloxycarbonyl Ritonavir
Length = 487
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 106/450 (23%), Positives = 189/450 (42%), Gaps = 45/450 (10%)
Query: 56 PGRLPLIGNLLQLKEKKPHMTFTRWAEVYGPIYSIKTGASTMIVLNSADVAKEAMVTR-Y 114
P LP +GN+L K M + YG ++ G ++ + D+ K +V Y
Sbjct: 21 PTPLPFLGNILSY-HKGFCMFDMECHKKYGKVWGFYDGQQPVLAITDPDMIKTVLVKECY 79
Query: 115 PSISTRKLSNALKMLTSNKCMVATSDYDEFHKMAKRCLLTNVLGGNAQKRH----RIHRD 170
+ R+ + + K ++ ++ +E+ ++ R LL+ K + D
Sbjct: 80 SVFTNRRPFGPVGFM---KSAISIAEDEEWKRL--RSLLSPTFTSGKLKEMVPIIAQYGD 134
Query: 171 TMMENMSTQFHAHIMDNPLQLVNFRKIFESELFAVSMKQAVGKVVESIYVKELGSTLSKD 230
++ N+ + + V + +F + V + G ++S+ + +
Sbjct: 135 VLVRNLRREAETG------KPVTLKDVFGAYSMDVITSTSFGVNIDSLNNPQDPFVENTK 188
Query: 231 EVFKILVLDIMEGAIEVDWRDFFPYLRWVPNKGVEMKIQRLCTRRQAVMDVLISEAK--- 287
++ + LD +I V FP+L + +++ +C + V + L K
Sbjct: 189 KLLRFDFLDPFFLSITV-----FPFLIPI------LEVLNICVFPREVTNFLRKSVKRMK 237
Query: 288 -SRIASGQE-----LNCYVDHLLSEV----KSLTEQQISMLLWEPIIETSDTTLVTTEWA 337
SR+ Q+ L +D S+ K+L++ ++ I +TT +
Sbjct: 238 ESRLEDTQKHRVDFLQLMIDSQNSKETESHKALSDLELVAQSIIFIFAGYETTSSVLSFI 297
Query: 338 MYELAKDPMRQDRLFQKIQSVCRSNKF--TEENIAQVPYLGAVFHETLRKYSPAPIVPLR 395
MYELA P Q +L ++I +V NK T + + Q+ YL V +ETLR + P + R
Sbjct: 298 MYELATHPDVQQKLQEEIDAVL-PNKAPPTYDTVLQMEYLDMVVNETLRLF-PIAMRLER 355
Query: 396 FAHEDTEIGGYFIPAGSEIAINIYGCNMDKKQWENPDEWKPERFLDGQYDPADLYKTMAF 455
+D EI G FIP G + I Y + D K W P+++ PERF D D Y F
Sbjct: 356 VCKKDVEINGMFIPKGVVVMIPSYALHRDPKYWTEPEKFLPERFSKKNKDNIDPYIYTPF 415
Query: 456 GTGKRVCAGSLQASLIACTAIGRLVQEFKW 485
G+G R C G A + A+ R++Q F +
Sbjct: 416 GSGPRNCIGMRFALMNMKLALIRVLQNFSF 445
>pdb|1W0E|A Chain A, Crystal Structure Of Human Cytochrome P450 3a4
pdb|1W0F|A Chain A, Crystal Structure Of Human Cytochrome P450 3a4
pdb|1W0G|A Chain A, Crystal Structure Of Human Cytochrome P450 3a4
pdb|2J0D|A Chain A, Crystal Structure Of Human P450 3a4 In Complex With
Erythromycin
pdb|2J0D|B Chain B, Crystal Structure Of Human P450 3a4 In Complex With
Erythromycin
pdb|2V0M|A Chain A, Crystal Structure Of Human P450 3a4 In Complex With
Ketoconazole
pdb|2V0M|B Chain B, Crystal Structure Of Human P450 3a4 In Complex With
Ketoconazole
pdb|2V0M|C Chain C, Crystal Structure Of Human P450 3a4 In Complex With
Ketoconazole
pdb|2V0M|D Chain D, Crystal Structure Of Human P450 3a4 In Complex With
Ketoconazole
pdb|3NXU|A Chain A, Crystal Structure Of Human Cytochrome P4503a4 Bound To An
Inhibitor Ritonavir
pdb|3NXU|B Chain B, Crystal Structure Of Human Cytochrome P4503a4 Bound To An
Inhibitor Ritonavir
Length = 485
Score = 89.4 bits (220), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 106/450 (23%), Positives = 189/450 (42%), Gaps = 45/450 (10%)
Query: 56 PGRLPLIGNLLQLKEKKPHMTFTRWAEVYGPIYSIKTGASTMIVLNSADVAKEAMVTR-Y 114
P LP +GN+L K M + YG ++ G ++ + D+ K +V Y
Sbjct: 19 PTPLPFLGNILSY-HKGFCMFDMECHKKYGKVWGFYDGQQPVLAITDPDMIKTVLVKECY 77
Query: 115 PSISTRKLSNALKMLTSNKCMVATSDYDEFHKMAKRCLLTNVLGGNAQKRH----RIHRD 170
+ R+ + + K ++ ++ +E+ ++ R LL+ K + D
Sbjct: 78 SVFTNRRPFGPVGFM---KSAISIAEDEEWKRL--RSLLSPTFTSGKLKEMVPIIAQYGD 132
Query: 171 TMMENMSTQFHAHIMDNPLQLVNFRKIFESELFAVSMKQAVGKVVESIYVKELGSTLSKD 230
++ N+ + + V + +F + V + G ++S+ + +
Sbjct: 133 VLVRNLRREAETG------KPVTLKDVFGAYSMDVITSTSFGVNIDSLNNPQDPFVENTK 186
Query: 231 EVFKILVLDIMEGAIEVDWRDFFPYLRWVPNKGVEMKIQRLCTRRQAVMDVLISEAK--- 287
++ + LD +I V FP+L + +++ +C + V + L K
Sbjct: 187 KLLRFDFLDPFFLSITV-----FPFLIPI------LEVLNICVFPREVTNFLRKSVKRMK 235
Query: 288 -SRIASGQE-----LNCYVDHLLSEV----KSLTEQQISMLLWEPIIETSDTTLVTTEWA 337
SR+ Q+ L +D S+ K+L++ ++ I +TT +
Sbjct: 236 ESRLEDTQKHRVDFLQLMIDSQNSKETESHKALSDLELVAQSIIFIFAGYETTSSVLSFI 295
Query: 338 MYELAKDPMRQDRLFQKIQSVCRSNKF--TEENIAQVPYLGAVFHETLRKYSPAPIVPLR 395
MYELA P Q +L ++I +V NK T + + Q+ YL V +ETLR + P + R
Sbjct: 296 MYELATHPDVQQKLQEEIDAVL-PNKAPPTYDTVLQMEYLDMVVNETLRLF-PIAMRLER 353
Query: 396 FAHEDTEIGGYFIPAGSEIAINIYGCNMDKKQWENPDEWKPERFLDGQYDPADLYKTMAF 455
+D EI G FIP G + I Y + D K W P+++ PERF D D Y F
Sbjct: 354 VCKKDVEINGMFIPKGVVVMIPSYALHRDPKYWTEPEKFLPERFSKKNKDNIDPYIYTPF 413
Query: 456 GTGKRVCAGSLQASLIACTAIGRLVQEFKW 485
G+G R C G A + A+ R++Q F +
Sbjct: 414 GSGPRNCIGMRFALMNMKLALIRVLQNFSF 443
>pdb|3DBG|A Chain A, Crystal Structure Of Cytochrome P450 170a1 (Cyp170a1) From
Streptomyces Coelicolor
pdb|3DBG|B Chain B, Crystal Structure Of Cytochrome P450 170a1 (Cyp170a1) From
Streptomyces Coelicolor
pdb|3EL3|A Chain A, Distinct Monooxygenase And Farnesene Synthase Active Sites
In Cytochrome P450 170a1
pdb|3EL3|B Chain B, Distinct Monooxygenase And Farnesene Synthase Active Sites
In Cytochrome P450 170a1
Length = 467
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 71/243 (29%), Positives = 118/243 (48%), Gaps = 16/243 (6%)
Query: 278 VMDVLISEAKSRIASGQELNCYVDHLLSEVKS-----LTEQQISMLLWEPIIETSDTTLV 332
++D +I+E R ASGQ+ + + LL E K + EQ+I + + S+T
Sbjct: 226 LVDEIIAE---RRASGQKPDDLLTALL-EAKDDNGDPIGEQEIHDQVVAILTPGSETIAS 281
Query: 333 TTEWAMYELAKDPMRQDRLFQKIQSVCRSNKFTEENIAQVPYLGAVFHETLRKYSPAPIV 392
T W + LA P DR+ ++++V E++ ++ + G V E +R PA V
Sbjct: 282 TIMWLLQALADHPEHADRIRDEVEAVTGGRPVAFEDVRKLRHTGNVIVEAMR-LRPAVWV 340
Query: 393 PLRFAHEDTEIGGYFIPAGSEIAINIYGCNMDKKQWENPDEWKPERFLDGQYDPADLYKT 452
R A ++E+GGY IPAG++I + Y D K +++ E+ P+R+L + Y
Sbjct: 341 LTRRAVAESELGGYRIPAGADIIYSPYAIQRDPKSYDDNLEFDPDRWLPERAANVPKYAM 400
Query: 453 MAFGTGKRVCAGSLQASLIACTAI-GRLVQEFKWNLREGEEESVDTVGLTTHKLHPLHAI 511
F GKR C S S+ T I L ++++ G ++V VG+T L P +
Sbjct: 401 KPFSAGKRKCP-SDHFSMAQLTLITAALATKYRFEQVAGSNDAV-RVGIT---LRPHDLL 455
Query: 512 IRP 514
+RP
Sbjct: 456 VRP 458
>pdb|3K9V|A Chain A, Crystal Structure Of Rat Mitochondrial P450 24a1 S57d In
Complex With Chaps
pdb|3K9V|B Chain B, Crystal Structure Of Rat Mitochondrial P450 24a1 S57d In
Complex With Chaps
pdb|3K9Y|A Chain A, Crystal Structure Of Rat Mitochondrial P450 24a1 S57d In
Complex With Cymal-5
pdb|3K9Y|B Chain B, Crystal Structure Of Rat Mitochondrial P450 24a1 S57d In
Complex With Cymal-5
Length = 482
Score = 78.6 bits (192), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 110/214 (51%), Gaps = 19/214 (8%)
Query: 293 GQELNCYV---DHLLSE--VKSLTEQQISMLLWEPIIETSDTTLVTTEWAMYELAKDPMR 347
G + C + DHL + ++TE Q++ +ET+ +L+ W +Y L+++P
Sbjct: 266 GADFLCDIYQQDHLSKKELYAAVTELQLA------AVETTANSLM---WILYNLSRNPQA 316
Query: 348 QDRLFQKIQSVCRSNKFTE-ENIAQVPYLGAVFHETLRKYSPAPIVPLRFAHEDTEIGGY 406
Q RL Q++QSV N+ E++ +PYL A E++R +P+ R + T +G Y
Sbjct: 317 QRRLLQEVQSVLPDNQTPRAEDLRNMPYLKACLKESMR-LTPSVPFTTRTLDKPTVLGEY 375
Query: 407 FIPAGSEIAINIYGCNMDKKQWENPDEWKPERFLDGQYDPADLYKTMAFGTGKRVCAGSL 466
+P G+ + +N + +E+ +++PER+L + + + + FG GKR+C G
Sbjct: 376 ALPKGTVLTLNTQVLGSSEDNFEDSHKFRPERWLQKE-KKINPFAHLPFGIGKRMCIGRR 434
Query: 467 QASLIACTAIGRLVQEFKWNLREGEEESVDTVGL 500
A L A+ ++Q K+++ + E V+ + L
Sbjct: 435 LAELQLHLALCWIIQ--KYDIVATDNEPVEMLHL 466
Score = 30.4 bits (67), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 32/60 (53%), Gaps = 6/60 (10%)
Query: 52 VPEVPG--RLPLIGNLLQL----KEKKPHMTFTRWAEVYGPIYSIKTGASTMIVLNSADV 105
V ++PG PL+G+LL++ KK H T + + YG I+ +K G+ + L S +
Sbjct: 23 VTDLPGPTNWPLLGSLLEIFWKGGLKKQHDTLAEYHKKYGQIFRMKLGSFDSVHLGSPSL 82
>pdb|1SMI|A Chain A, A Single Mutation Of P450 Bm3 Induces The Conformational
Rearrangement Seen Upon Substrate-Binding In Wild-Type
Enzyme
pdb|1SMI|B Chain B, A Single Mutation Of P450 Bm3 Induces The Conformational
Rearrangement Seen Upon Substrate-Binding In Wild-Type
Enzyme
pdb|1SMJ|A Chain A, Structure Of The A264e Mutant Of Cytochrome P450 Bm3
Complexed With Palmitoleate
pdb|1SMJ|B Chain B, Structure Of The A264e Mutant Of Cytochrome P450 Bm3
Complexed With Palmitoleate
pdb|1SMJ|C Chain C, Structure Of The A264e Mutant Of Cytochrome P450 Bm3
Complexed With Palmitoleate
pdb|1SMJ|D Chain D, Structure Of The A264e Mutant Of Cytochrome P450 Bm3
Complexed With Palmitoleate
Length = 471
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 108/216 (50%), Gaps = 11/216 (5%)
Query: 278 VMDVLISEA-KSRIASGQELNCYVDHLLS-----EVKSLTEQQISMLLWEPIIETSDTTL 331
VM+ L+ + R ASG++ + + H+L+ + L ++ I + +IE +TT
Sbjct: 211 VMNDLVDKIIADRKASGEQSDDLLTHMLNGKDPETGEPLDDENIRYQIITFLIEGHETTS 270
Query: 332 VTTEWAMYELAKDPMRQDRLFQKIQSVCRSNKFTEENIAQVPYLGAVFHETLRKYSPAPI 391
+A+Y L K+P + ++ V + + + Q+ Y+G V +E LR + AP
Sbjct: 271 GLLSFALYFLVKNPHVLQKAAEEAARVLVDPVPSYKQVKQLKYVGMVLNEALRLWPTAPA 330
Query: 392 VPLRFAHEDTEIGG-YFIPAGSEIAINIYGCNMDKKQW-ENPDEWKPERFLDGQYDPADL 449
L +A EDT +GG Y + G E+ + I + DK W ++ +E++PERF + P
Sbjct: 331 FSL-YAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQHA 389
Query: 450 YKTMAFGTGKRVCAGSLQASLIACTAIGRLVQEFKW 485
+K FG G+R C G A A +G +++ F +
Sbjct: 390 FK--PFGNGQRACIGQQFALHEATLVLGMMLKHFDF 423
>pdb|4DUC|A Chain A, Cytochrome P450 Bm3h-2g9 Mri Sensor, No Ligand
pdb|4DUC|B Chain B, Cytochrome P450 Bm3h-2g9 Mri Sensor, No Ligand
Length = 472
Score = 75.5 bits (184), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 113/473 (23%), Positives = 193/473 (40%), Gaps = 81/473 (17%)
Query: 45 LAVKLPPVPEVPGRLPLIGNLLQLKEKKPHMTFTRWAEVYGPIYSIKTGASTMIVLNSAD 104
+ +K P P+ G L NL L KP + A+ G I+ + L+S
Sbjct: 1 MTIKEMPQPKTFGEL---KNLPLLNTDKPVQALMKIADELGEIFKFEAPGRVTCYLSSQR 57
Query: 105 VAKEAMVTRYPSISTRKLSNALKMLTSNKCMVATSDYDEFHKMAKRCLLTN-VLGGNAQK 163
+ KEA S + LS ALK + A LLT+ N +K
Sbjct: 58 LIKEACDE---SRFDKNLSQALKFVRD---------------FAGDGLLTSWTHEKNWKK 99
Query: 164 RHRIHRDTMMENMSTQFHAHIMDNPLQLVNFRKIFESELFAVSMKQAVGKVVESIYVKEL 223
H I + + +HA ++D +QLV + ++ E I V E
Sbjct: 100 AHNILLPSFSQQAMKGYHAMMVDIAVQLVQKWERLNAD--------------EHIEVPED 145
Query: 224 GSTLSKDEVFKILVLDIMEGAIEVDWRDFFPYLRWVPNKGVEM----------KIQRLC- 272
+ L+ D + G ++R F + R P+ + K+QR
Sbjct: 146 MTRLTLDTI----------GLCGFNYR-FNSFYRDQPHPFITSMVRALDEAMNKLQRANP 194
Query: 273 -------TRRQ-----AVMDVLISEA-KSRIASGQELNCYVDHLLS-----EVKSLTEQQ 314
+RQ VM+ L+ + R ASG++ + + H+L+ + L ++
Sbjct: 195 DDPAYDENKRQFQEDIKVMNDLVDKIIADRKASGEQSDDLLTHMLNGKDPETGEPLDDEN 254
Query: 315 ISMLLWEPIIETSDTTLVTTEWAMYELAKDPMRQDRLFQKIQSVCRSNKFTEENIAQVPY 374
I + +I ++T +A+Y L K+P + ++ V + + + Q+ Y
Sbjct: 255 IRYQIITFLIAGHESTSGLLSFALYFLVKNPHVLQKAAEEAARVLVDPVPSYKQVKQLKY 314
Query: 375 LGAVFHETLRKYSPAPIVPLRFAHEDTEIGG-YFIPAGSEIAINIYGCNMDKKQW-ENPD 432
+G V +E LR + AP L +A EDT +GG Y + G E+ + I + DK W ++ +
Sbjct: 315 VGMVLNEALRLWPTAPAFSL-YAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVE 373
Query: 433 EWKPERFLDGQYDPADLYKTMAFGTGKRVCAGSLQASLIACTAIGRLVQEFKW 485
E++PERF + P +K FG G+R C G A A +G +++ F +
Sbjct: 374 EFRPERFENPSAIPQHAFK--PFGNGQRACIGQQFALHEATLVLGMMLKHFDF 424
>pdb|3EKF|A Chain A, Crystal Structure Of The A264q Heme Domain Of Cytochrome
P450 Bm3
pdb|3EKF|B Chain B, Crystal Structure Of The A264q Heme Domain Of Cytochrome
P450 Bm3
Length = 470
Score = 75.5 bits (184), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 108/216 (50%), Gaps = 11/216 (5%)
Query: 278 VMDVLISEA-KSRIASGQELNCYVDHLLS-----EVKSLTEQQISMLLWEPIIETSDTTL 331
VM+ L+ + R ASG++ + + H+L+ + L ++ I + +I+ +TT
Sbjct: 211 VMNDLVDKIIADRKASGEQSDDLLTHMLNGKDPETGEPLDDENIRYQIITFLIQGHETTS 270
Query: 332 VTTEWAMYELAKDPMRQDRLFQKIQSVCRSNKFTEENIAQVPYLGAVFHETLRKYSPAPI 391
+A+Y L K+P + ++ V + + + Q+ Y+G V +E LR + AP
Sbjct: 271 GLLSFALYFLVKNPHVLQKAAEEAARVLVDPVPSYKQVKQLKYVGMVLNEALRLWPTAPA 330
Query: 392 VPLRFAHEDTEIGG-YFIPAGSEIAINIYGCNMDKKQW-ENPDEWKPERFLDGQYDPADL 449
L +A EDT +GG Y + G E+ + I + DK W ++ +E++PERF + P
Sbjct: 331 FSL-YAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQHA 389
Query: 450 YKTMAFGTGKRVCAGSLQASLIACTAIGRLVQEFKW 485
+K FG G+R C G A A +G +++ F +
Sbjct: 390 FK--PFGNGQRACIGQQFALHEATLVLGMMLKHFDF 423
>pdb|3KX5|A Chain A, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
pdb|3KX5|B Chain B, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
Length = 470
Score = 75.1 bits (183), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 107/216 (49%), Gaps = 11/216 (5%)
Query: 278 VMDVLISEA-KSRIASGQELNCYVDHLLS-----EVKSLTEQQISMLLWEPIIETSDTTL 331
VM+ L+ + R ASG++ + + H+L+ + L ++ I + +I +TT
Sbjct: 211 VMNDLVDKIIADRKASGEQSDDLLTHMLNGKDPETGEPLDDENIRYQIITELIAGHETTS 270
Query: 332 VTTEWAMYELAKDPMRQDRLFQKIQSVCRSNKFTEENIAQVPYLGAVFHETLRKYSPAPI 391
+A+Y L K+P + ++ V + + + Q+ Y+G V +E LR + AP
Sbjct: 271 GLLSFALYFLVKNPHVLQKAAEEAARVLVDPVPSYKQVKQLKYVGMVLNEALRLWPTAPA 330
Query: 392 VPLRFAHEDTEIGG-YFIPAGSEIAINIYGCNMDKKQW-ENPDEWKPERFLDGQYDPADL 449
L +A EDT +GG Y + G E+ + I + DK W ++ +E++PERF + P
Sbjct: 331 FSL-YAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQHA 389
Query: 450 YKTMAFGTGKRVCAGSLQASLIACTAIGRLVQEFKW 485
+K FG G+R C G A A +G +++ F +
Sbjct: 390 FK--PFGNGQRACIGQQFALHEATLVLGMMLKHFDF 423
>pdb|2IJ4|A Chain A, Structure Of The A264k Mutant Of Cytochrome P450 Bm3
pdb|2IJ4|B Chain B, Structure Of The A264k Mutant Of Cytochrome P450 Bm3
Length = 470
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 108/216 (50%), Gaps = 11/216 (5%)
Query: 278 VMDVLISEA-KSRIASGQELNCYVDHLLS-----EVKSLTEQQISMLLWEPIIETSDTTL 331
VM+ L+ + R ASG++ + + H+L+ + L ++ I + +I+ +TT
Sbjct: 211 VMNDLVDKIIADRKASGEQSDDLLTHMLNGKDPETGEPLDDENIRYQIITFLIKGHETTS 270
Query: 332 VTTEWAMYELAKDPMRQDRLFQKIQSVCRSNKFTEENIAQVPYLGAVFHETLRKYSPAPI 391
+A+Y L K+P + ++ V + + + Q+ Y+G V +E LR + AP
Sbjct: 271 GLLSFALYFLVKNPHVLQKAAEEAARVLVDPVPSYKQVKQLKYVGMVLNEALRLWPTAPA 330
Query: 392 VPLRFAHEDTEIGG-YFIPAGSEIAINIYGCNMDKKQW-ENPDEWKPERFLDGQYDPADL 449
L +A EDT +GG Y + G E+ + I + DK W ++ +E++PERF + P
Sbjct: 331 FSL-YAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQHA 389
Query: 450 YKTMAFGTGKRVCAGSLQASLIACTAIGRLVQEFKW 485
+K FG G+R C G A A +G +++ F +
Sbjct: 390 FK--PFGNGQRACIGQQFALHEATLVLGMMLKHFDF 423
>pdb|4DUF|A Chain A, Cytochrome P450 Bm3h-2g9 Mri Sensor Bound To Serotonin
pdb|4DUF|B Chain B, Cytochrome P450 Bm3h-2g9 Mri Sensor Bound To Serotonin
pdb|4DUF|C Chain C, Cytochrome P450 Bm3h-2g9 Mri Sensor Bound To Serotonin
pdb|4DUF|D Chain D, Cytochrome P450 Bm3h-2g9 Mri Sensor Bound To Serotonin
Length = 471
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 113/471 (23%), Positives = 192/471 (40%), Gaps = 81/471 (17%)
Query: 47 VKLPPVPEVPGRLPLIGNLLQLKEKKPHMTFTRWAEVYGPIYSIKTGASTMIVLNSADVA 106
+K P P+ G L NL L KP + A+ G I+ + L+S +
Sbjct: 2 IKEMPQPKTFGEL---KNLPLLNTDKPVQALMKIADELGEIFKFEAPGRVTCYLSSQRLI 58
Query: 107 KEAMVTRYPSISTRKLSNALKMLTSNKCMVATSDYDEFHKMAKRCLLTN-VLGGNAQKRH 165
KEA S + LS ALK + A LLT+ N +K H
Sbjct: 59 KEACDE---SRFDKNLSQALKFVRD---------------FAGDGLLTSWTHEKNWKKAH 100
Query: 166 RIHRDTMMENMSTQFHAHIMDNPLQLVNFRKIFESELFAVSMKQAVGKVVESIYVKELGS 225
I + + +HA ++D +QLV + ++ E I V E +
Sbjct: 101 NILLPSFSQQAMKGYHAMMVDIAVQLVQKWERLNAD--------------EHIEVPEDMT 146
Query: 226 TLSKDEVFKILVLDIMEGAIEVDWRDFFPYLRWVPNKGVEM----------KIQRLC--- 272
L+ D + G ++R F + R P+ + K+QR
Sbjct: 147 RLTLDTI----------GLCGFNYR-FNSFYRDQPHPFITSMVRALDEAMNKLQRANPDD 195
Query: 273 -----TRRQ-----AVMDVLISEA-KSRIASGQELNCYVDHLLS-----EVKSLTEQQIS 316
+RQ VM+ L+ + R ASG++ + + H+L+ + L ++ I
Sbjct: 196 PAYDENKRQFQEDIKVMNDLVDKIIADRKASGEQSDDLLTHMLNGKDPETGEPLDDENIR 255
Query: 317 MLLWEPIIETSDTTLVTTEWAMYELAKDPMRQDRLFQKIQSVCRSNKFTEENIAQVPYLG 376
+ +I ++T +A+Y L K+P + ++ V + + + Q+ Y+G
Sbjct: 256 YQIITFLIAGHESTSGLLSFALYFLVKNPHVLQKAAEEAARVLVDPVPSYKQVKQLKYVG 315
Query: 377 AVFHETLRKYSPAPIVPLRFAHEDTEIGG-YFIPAGSEIAINIYGCNMDKKQW-ENPDEW 434
V +E LR + AP L +A EDT +GG Y + G E+ + I + DK W ++ +E+
Sbjct: 316 MVLNEALRLWPTAPAFSL-YAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEF 374
Query: 435 KPERFLDGQYDPADLYKTMAFGTGKRVCAGSLQASLIACTAIGRLVQEFKW 485
+PERF + P +K FG G+R C G A A +G +++ F +
Sbjct: 375 RPERFENPSAIPQHAFK--PFGNGQRACIGQQFALHEATLVLGMMLKHFDF 423
>pdb|2IJ3|A Chain A, Structure Of The A264h Mutant Of Cytochrome P450 Bm3
pdb|2IJ3|B Chain B, Structure Of The A264h Mutant Of Cytochrome P450 Bm3
Length = 470
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 107/216 (49%), Gaps = 11/216 (5%)
Query: 278 VMDVLISEA-KSRIASGQELNCYVDHLLS-----EVKSLTEQQISMLLWEPIIETSDTTL 331
VM+ L+ + R ASG++ + + H+L+ + L ++ I + +I +TT
Sbjct: 211 VMNDLVDKIIADRKASGEQSDDLLTHMLNGKDPETGEPLDDENIRYQIITFLIHGHETTS 270
Query: 332 VTTEWAMYELAKDPMRQDRLFQKIQSVCRSNKFTEENIAQVPYLGAVFHETLRKYSPAPI 391
+A+Y L K+P + ++ V + + + Q+ Y+G V +E LR + AP
Sbjct: 271 GLLSFALYFLVKNPHVLQKAAEEAARVLVDPVPSYKQVKQLKYVGMVLNEALRLWPTAPA 330
Query: 392 VPLRFAHEDTEIGG-YFIPAGSEIAINIYGCNMDKKQW-ENPDEWKPERFLDGQYDPADL 449
L +A EDT +GG Y + G E+ + I + DK W ++ +E++PERF + P
Sbjct: 331 FSL-YAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQHA 389
Query: 450 YKTMAFGTGKRVCAGSLQASLIACTAIGRLVQEFKW 485
+K FG G+R C G A A +G +++ F +
Sbjct: 390 FK--PFGNGQRACIGQQFALHEATLVLGMMLKHFDF 423
>pdb|4DUD|A Chain A, Cytochrome P450 Bm3h-2g9c6 Mri Sensor, No Ligand
pdb|4DUD|B Chain B, Cytochrome P450 Bm3h-2g9c6 Mri Sensor, No Ligand
pdb|4DUE|A Chain A, Cytochrome P450 Bm3h-2g9c6 Mri Sensor Bound To Serotonin
pdb|4DUE|B Chain B, Cytochrome P450 Bm3h-2g9c6 Mri Sensor Bound To Serotonin
Length = 471
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 113/471 (23%), Positives = 192/471 (40%), Gaps = 81/471 (17%)
Query: 47 VKLPPVPEVPGRLPLIGNLLQLKEKKPHMTFTRWAEVYGPIYSIKTGASTMIVLNSADVA 106
+K P P+ G L NL L KP + A+ G I+ + L+S +
Sbjct: 2 IKEMPQPKTFGEL---KNLPLLNTDKPVQALMKIADELGEIFKFEAPGRVTCYLSSQRLI 58
Query: 107 KEAMVTRYPSISTRKLSNALKMLTSNKCMVATSDYDEFHKMAKRCLLTN-VLGGNAQKRH 165
KEA S + LS ALK + A LLT+ N +K H
Sbjct: 59 KEACDE---SRFDKNLSQALKFVRD---------------FAGDGLLTSWTHEKNWKKAH 100
Query: 166 RIHRDTMMENMSTQFHAHIMDNPLQLVNFRKIFESELFAVSMKQAVGKVVESIYVKELGS 225
I + + +HA ++D +QLV + ++ E I V E +
Sbjct: 101 NILLPSFSQQAMKGYHAMMVDIAVQLVQKWERLNAD--------------EHIEVPEDMT 146
Query: 226 TLSKDEVFKILVLDIMEGAIEVDWRDFFPYLRWVPNKGVEM----------KIQRLC--- 272
L+ D + G ++R F + R P+ + K+QR
Sbjct: 147 RLTLDTI----------GLCGFNYR-FNSFYRDQPHPFITSMVRALDEAMNKLQRANPDD 195
Query: 273 -----TRRQ-----AVMDVLISEA-KSRIASGQELNCYVDHLLS-----EVKSLTEQQIS 316
+RQ VM+ L+ + R ASG++ + + H+L+ + L ++ I
Sbjct: 196 PAYDENKRQFQEDIKVMNDLVDKIIADRKASGEQSDDLLTHMLNGKDPETGEPLDDENIR 255
Query: 317 MLLWEPIIETSDTTLVTTEWAMYELAKDPMRQDRLFQKIQSVCRSNKFTEENIAQVPYLG 376
+ +I ++T +A+Y L K+P + ++ V + + + Q+ Y+G
Sbjct: 256 YQIITFLIAGHESTSGLLSFALYFLVKNPHVLQKAAEEAARVLVDPVPSYKQVKQLKYVG 315
Query: 377 AVFHETLRKYSPAPIVPLRFAHEDTEIGG-YFIPAGSEIAINIYGCNMDKKQW-ENPDEW 434
V +E LR + AP L +A EDT +GG Y + G E+ + I + DK W ++ +E+
Sbjct: 316 MVLNEALRLWPTAPAFSL-YAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEF 374
Query: 435 KPERFLDGQYDPADLYKTMAFGTGKRVCAGSLQASLIACTAIGRLVQEFKW 485
+PERF + P +K FG G+R C G A A +G +++ F +
Sbjct: 375 RPERFENPSAIPQHAFK--PFGNGQRACIGQQFALHEATLVLGMMLKHFDF 423
>pdb|3HF2|A Chain A, Crystal Structure Of The I401p Mutant Of Cytochrome P450
Bm3
pdb|3HF2|B Chain B, Crystal Structure Of The I401p Mutant Of Cytochrome P450
Bm3
Length = 482
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 107/216 (49%), Gaps = 11/216 (5%)
Query: 278 VMDVLISEA-KSRIASGQELNCYVDHLLS-----EVKSLTEQQISMLLWEPIIETSDTTL 331
VM+ L+ + R ASG++ + + H+L+ + L ++ I + +I +TT
Sbjct: 212 VMNDLVDKIIADRKASGEQSDDLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHETTS 271
Query: 332 VTTEWAMYELAKDPMRQDRLFQKIQSVCRSNKFTEENIAQVPYLGAVFHETLRKYSPAPI 391
+A+Y L K+P + ++ V + + + Q+ Y+G V +E LR + AP
Sbjct: 272 GLLSFALYFLVKNPHVLQKAAEEAARVLVDPVPSYKQVKQLKYVGMVLNEALRLWPTAPA 331
Query: 392 VPLRFAHEDTEIGG-YFIPAGSEIAINIYGCNMDKKQW-ENPDEWKPERFLDGQYDPADL 449
L +A EDT +GG Y + G E+ + I + DK W ++ +E++PERF + P
Sbjct: 332 FSL-YAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQHA 390
Query: 450 YKTMAFGTGKRVCAGSLQASLIACTAIGRLVQEFKW 485
+K FG G+R C G A A +G +++ F +
Sbjct: 391 FK--PFGNGQRACPGQQFALHEATLVLGMMLKHFDF 424
>pdb|1BVY|A Chain A, Complex Of The Heme And Fmn-Binding Domains Of The
Cytochrome P450(Bm-3)
pdb|1BVY|B Chain B, Complex Of The Heme And Fmn-Binding Domains Of The
Cytochrome P450(Bm-3)
Length = 458
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 107/216 (49%), Gaps = 11/216 (5%)
Query: 278 VMDVLISEA-KSRIASGQELNCYVDHLLS-----EVKSLTEQQISMLLWEPIIETSDTTL 331
VM+ L+ + R ASG++ + + H+L+ + L ++ I + +I +TT
Sbjct: 211 VMNDLVDKIIADRKASGEQSDDLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHETTS 270
Query: 332 VTTEWAMYELAKDPMRQDRLFQKIQSVCRSNKFTEENIAQVPYLGAVFHETLRKYSPAPI 391
+A+Y L K+P + ++ V + + + Q+ Y+G V +E LR + AP
Sbjct: 271 GLLSFALYFLVKNPHVLQKAAEEAARVLVDPVPSYKQVKQLKYVGMVLNEALRLWPTAPA 330
Query: 392 VPLRFAHEDTEIGG-YFIPAGSEIAINIYGCNMDKKQW-ENPDEWKPERFLDGQYDPADL 449
L +A EDT +GG Y + G E+ + I + DK W ++ +E++PERF + P
Sbjct: 331 FSL-YAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQHA 389
Query: 450 YKTMAFGTGKRVCAGSLQASLIACTAIGRLVQEFKW 485
+K FG G+R C G A A +G +++ F +
Sbjct: 390 FK--PFGNGQRACIGQQFALHEATLVLGMMLKHFDF 423
>pdb|1JPZ|A Chain A, Crystal Structure Of A Complex Of The Heme Domain Of
P450bm- 3 With N-Palmitoylglycine
pdb|1JPZ|B Chain B, Crystal Structure Of A Complex Of The Heme Domain Of
P450bm- 3 With N-Palmitoylglycine
pdb|1ZO9|A Chain A, Crystal Structure Of The Wild Type Heme Domain Of P450bm-3
With N- Palmitoylmethionine
pdb|1ZO9|B Chain B, Crystal Structure Of The Wild Type Heme Domain Of P450bm-3
With N- Palmitoylmethionine
Length = 473
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 113/473 (23%), Positives = 192/473 (40%), Gaps = 81/473 (17%)
Query: 45 LAVKLPPVPEVPGRLPLIGNLLQLKEKKPHMTFTRWAEVYGPIYSIKTGASTMIVLNSAD 104
+ +K P P+ G L NL L KP + A+ G I+ + L+S
Sbjct: 3 MTIKEMPQPKTFGEL---KNLPLLNTDKPVQALMKIADELGEIFKFEAPGRVTRYLSSQR 59
Query: 105 VAKEAMVTRYPSISTRKLSNALKMLTSNKCMVATSDYDEFHKMAKRCLLTN-VLGGNAQK 163
+ KEA S + LS ALK + A L T+ N +K
Sbjct: 60 LIKEACDE---SRFDKNLSQALKFVRD---------------FAGDGLFTSWTHEKNWKK 101
Query: 164 RHRIHRDTMMENMSTQFHAHIMDNPLQLVNFRKIFESELFAVSMKQAVGKVVESIYVKEL 223
H I + + +HA ++D +QLV + ++ E I V E
Sbjct: 102 AHNILLPSFSQQAMKGYHAMMVDIAVQLVQKWERLNAD--------------EHIEVPED 147
Query: 224 GSTLSKDEVFKILVLDIMEGAIEVDWRDFFPYLRWVPNKGVEM----------KIQRLC- 272
+ L+ D + G ++R F + R P+ + K+QR
Sbjct: 148 MTRLTLDTI----------GLCGFNYR-FNSFYRDQPHPFITSMVRALDEAMNKLQRANP 196
Query: 273 -------TRRQ-----AVMDVLISEA-KSRIASGQELNCYVDHLLS-----EVKSLTEQQ 314
+RQ VM+ L+ + R ASG++ + + H+L+ + L ++
Sbjct: 197 DDPAYDENKRQFQEDIKVMNDLVDKIIADRKASGEQSDDLLTHMLNGKDPETGEPLDDEN 256
Query: 315 ISMLLWEPIIETSDTTLVTTEWAMYELAKDPMRQDRLFQKIQSVCRSNKFTEENIAQVPY 374
I + +I +TT +A+Y L K+P + ++ V + + + Q+ Y
Sbjct: 257 IRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVLVDPVPSYKQVKQLKY 316
Query: 375 LGAVFHETLRKYSPAPIVPLRFAHEDTEIGG-YFIPAGSEIAINIYGCNMDKKQW-ENPD 432
+G V +E LR + AP L +A EDT +GG Y + G E+ + I + DK W ++ +
Sbjct: 317 VGMVLNEALRLWPTAPAFSL-YAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVE 375
Query: 433 EWKPERFLDGQYDPADLYKTMAFGTGKRVCAGSLQASLIACTAIGRLVQEFKW 485
E++PERF + P +K FG G+R C G A A +G +++ F +
Sbjct: 376 EFRPERFENPSAIPQHAFK--PFGNGQRACIGQQFALHEATLVLGMMLKHFDF 426
>pdb|3BEN|A Chain A, Structure Of N-(12-Imidazolyl-Dodecanoyl)-L-Leucine
Inhibitor Bound To The Heme Domain Of Cytochrome
P450-Bm3
pdb|3BEN|B Chain B, Structure Of N-(12-Imidazolyl-Dodecanoyl)-L-Leucine
Inhibitor Bound To The Heme Domain Of Cytochrome
P450-Bm3
Length = 470
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 113/473 (23%), Positives = 192/473 (40%), Gaps = 81/473 (17%)
Query: 45 LAVKLPPVPEVPGRLPLIGNLLQLKEKKPHMTFTRWAEVYGPIYSIKTGASTMIVLNSAD 104
+ +K P P+ G L NL L KP + A+ G I+ + L+S
Sbjct: 1 MTIKEMPQPKTFGEL---KNLPLLNTDKPVQALMKIADELGEIFKFEAPGRVTRYLSSQR 57
Query: 105 VAKEAMVTRYPSISTRKLSNALKMLTSNKCMVATSDYDEFHKMAKRCLLTN-VLGGNAQK 163
+ KEA S + LS ALK + A L T+ N +K
Sbjct: 58 LIKEACDE---SRFDKNLSQALKFVRD---------------FAGDGLFTSWTHEKNWKK 99
Query: 164 RHRIHRDTMMENMSTQFHAHIMDNPLQLVNFRKIFESELFAVSMKQAVGKVVESIYVKEL 223
H I + + +HA ++D +QLV + ++ E I V E
Sbjct: 100 AHNILLPSFSQQAMKGYHAMMVDIAVQLVQKWERLNAD--------------EHIEVPED 145
Query: 224 GSTLSKDEVFKILVLDIMEGAIEVDWRDFFPYLRWVPNKGVEM----------KIQRLC- 272
+ L+ D + G ++R F + R P+ + K+QR
Sbjct: 146 MTRLTLDTI----------GLCGFNYR-FNSFYRDQPHPFITSMVRALDEAMNKLQRANP 194
Query: 273 -------TRRQ-----AVMDVLISEA-KSRIASGQELNCYVDHLLS-----EVKSLTEQQ 314
+RQ VM+ L+ + R ASG++ + + H+L+ + L ++
Sbjct: 195 DDPAYDENKRQFQEDIKVMNDLVDKIIADRKASGEQSDDLLTHMLNGKDPETGEPLDDEN 254
Query: 315 ISMLLWEPIIETSDTTLVTTEWAMYELAKDPMRQDRLFQKIQSVCRSNKFTEENIAQVPY 374
I + +I +TT +A+Y L K+P + ++ V + + + Q+ Y
Sbjct: 255 IRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVLVDPVPSYKQVKQLKY 314
Query: 375 LGAVFHETLRKYSPAPIVPLRFAHEDTEIGG-YFIPAGSEIAINIYGCNMDKKQW-ENPD 432
+G V +E LR + AP L +A EDT +GG Y + G E+ + I + DK W ++ +
Sbjct: 315 VGMVLNEALRLWPTAPAFSL-YAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVE 373
Query: 433 EWKPERFLDGQYDPADLYKTMAFGTGKRVCAGSLQASLIACTAIGRLVQEFKW 485
E++PERF + P +K FG G+R C G A A +G +++ F +
Sbjct: 374 EFRPERFENPSAIPQHAFK--PFGNGQRACIGQQFALHEATLVLGMMLKHFDF 424
>pdb|2UWH|A Chain A, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
pdb|2UWH|B Chain B, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
pdb|2UWH|C Chain C, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
pdb|2UWH|D Chain D, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
pdb|2UWH|E Chain E, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
pdb|2UWH|F Chain F, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
Length = 458
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 107/216 (49%), Gaps = 11/216 (5%)
Query: 278 VMDVLISEA-KSRIASGQELNCYVDHLLS-----EVKSLTEQQISMLLWEPIIETSDTTL 331
VM+ L+ + R ASG++ + + H+L+ + L ++ I + +I +TT
Sbjct: 211 VMNDLVDKIIADRKASGEQSDDLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHETTS 270
Query: 332 VTTEWAMYELAKDPMRQDRLFQKIQSVCRSNKFTEENIAQVPYLGAVFHETLRKYSPAPI 391
+A+Y L K+P + ++ V + + + Q+ Y+G V +E LR + AP
Sbjct: 271 GLLSFALYFLVKNPHVLQKAAEEAARVLVDPVPSYKQVKQLKYVGMVLNEALRLWPTAPA 330
Query: 392 VPLRFAHEDTEIGG-YFIPAGSEIAINIYGCNMDKKQW-ENPDEWKPERFLDGQYDPADL 449
L +A EDT +GG Y + G E+ + I + DK W ++ +E++PERF + P
Sbjct: 331 FSL-YAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQHA 389
Query: 450 YKTMAFGTGKRVCAGSLQASLIACTAIGRLVQEFKW 485
+K FG G+R C G A A +G +++ F +
Sbjct: 390 FK--PFGNGQRACIGQQFALHEATLVLGMMLKHFDF 423
>pdb|3KX4|A Chain A, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
pdb|3KX4|B Chain B, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
Length = 470
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 107/216 (49%), Gaps = 11/216 (5%)
Query: 278 VMDVLISEA-KSRIASGQELNCYVDHLLS-----EVKSLTEQQISMLLWEPIIETSDTTL 331
VM+ L+ + R ASG++ + + H+L+ + L ++ I + +I +TT
Sbjct: 211 VMNDLVDKIIADRKASGEQSDDLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHETTS 270
Query: 332 VTTEWAMYELAKDPMRQDRLFQKIQSVCRSNKFTEENIAQVPYLGAVFHETLRKYSPAPI 391
+A+Y L K+P + ++ V + + + Q+ Y+G V +E LR + AP
Sbjct: 271 GLLSFALYFLVKNPHVLQKAAEEAARVLVDPVPSYKQVKQLKYVGMVLNEALRLWPTAPA 330
Query: 392 VPLRFAHEDTEIGG-YFIPAGSEIAINIYGCNMDKKQW-ENPDEWKPERFLDGQYDPADL 449
L +A EDT +GG Y + G E+ + I + DK W ++ +E++PERF + P
Sbjct: 331 FSL-YAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQHA 389
Query: 450 YKTMAFGTGKRVCAGSLQASLIACTAIGRLVQEFKW 485
+K FG G+R C G A A +G +++ F +
Sbjct: 390 FK--PFGNGQRACEGQQFALHEATLVLGMMLKHFDF 423
>pdb|2BMH|A Chain A, Modeling Protein-Substrate Interactions In The Heme Domain
Of Cytochrome P450bm-3
pdb|2BMH|B Chain B, Modeling Protein-Substrate Interactions In The Heme Domain
Of Cytochrome P450bm-3
pdb|1BU7|A Chain A, Cryogenic Structure Of Cytochrome P450bm-3 Heme Domain
pdb|1BU7|B Chain B, Cryogenic Structure Of Cytochrome P450bm-3 Heme Domain
pdb|2J1M|A Chain A, P450 Bm3 Heme Domain In Complex With Dmso
pdb|2J1M|B Chain B, P450 Bm3 Heme Domain In Complex With Dmso
pdb|2J4S|A Chain A, P450 Bm3 Heme Domain In Complex With Dmso
pdb|2J4S|B Chain B, P450 Bm3 Heme Domain In Complex With Dmso
Length = 455
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 107/216 (49%), Gaps = 11/216 (5%)
Query: 278 VMDVLISEA-KSRIASGQELNCYVDHLLS-----EVKSLTEQQISMLLWEPIIETSDTTL 331
VM+ L+ + R ASG++ + + H+L+ + L ++ I + +I +TT
Sbjct: 211 VMNDLVDKIIADRKASGEQSDDLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHETTS 270
Query: 332 VTTEWAMYELAKDPMRQDRLFQKIQSVCRSNKFTEENIAQVPYLGAVFHETLRKYSPAPI 391
+A+Y L K+P + ++ V + + + Q+ Y+G V +E LR + AP
Sbjct: 271 GLLSFALYFLVKNPHVLQKAAEEAARVLVDPVPSYKQVKQLKYVGMVLNEALRLWPTAPA 330
Query: 392 VPLRFAHEDTEIGG-YFIPAGSEIAINIYGCNMDKKQW-ENPDEWKPERFLDGQYDPADL 449
L +A EDT +GG Y + G E+ + I + DK W ++ +E++PERF + P
Sbjct: 331 FSL-YAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQHA 389
Query: 450 YKTMAFGTGKRVCAGSLQASLIACTAIGRLVQEFKW 485
+K FG G+R C G A A +G +++ F +
Sbjct: 390 FK--PFGNGQRACIGQQFALHEATLVLGMMLKHFDF 423
>pdb|2X7Y|A Chain A, P450 Bm3 F87a In Complex With Dmso
pdb|2X7Y|B Chain B, P450 Bm3 F87a In Complex With Dmso
pdb|2X80|A Chain A, P450 Bm3 F87a In Complex With Dmso
pdb|2X80|B Chain B, P450 Bm3 F87a In Complex With Dmso
Length = 455
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 107/216 (49%), Gaps = 11/216 (5%)
Query: 278 VMDVLISEA-KSRIASGQELNCYVDHLLS-----EVKSLTEQQISMLLWEPIIETSDTTL 331
VM+ L+ + R ASG++ + + H+L+ + L ++ I + +I +TT
Sbjct: 211 VMNDLVDKIIADRKASGEQSDDLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHETTS 270
Query: 332 VTTEWAMYELAKDPMRQDRLFQKIQSVCRSNKFTEENIAQVPYLGAVFHETLRKYSPAPI 391
+A+Y L K+P + ++ V + + + Q+ Y+G V +E LR + AP
Sbjct: 271 GLLSFALYFLVKNPHVLQKAAEEAARVLVDPVPSYKQVKQLKYVGMVLNEALRLWPTAPA 330
Query: 392 VPLRFAHEDTEIGG-YFIPAGSEIAINIYGCNMDKKQW-ENPDEWKPERFLDGQYDPADL 449
L +A EDT +GG Y + G E+ + I + DK W ++ +E++PERF + P
Sbjct: 331 FSL-YAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQHA 389
Query: 450 YKTMAFGTGKRVCAGSLQASLIACTAIGRLVQEFKW 485
+K FG G+R C G A A +G +++ F +
Sbjct: 390 FK--PFGNGQRACIGQQFALHEATLVLGMMLKHFDF 423
>pdb|3NPL|A Chain A, Structure Of Ru(Bpy)2(A-Phen)(K97c) P450 Bm3 Heme Domain,
A Ruthenium Modified P450 Bm3 Mutant
pdb|3NPL|B Chain B, Structure Of Ru(Bpy)2(A-Phen)(K97c) P450 Bm3 Heme Domain,
A Ruthenium Modified P450 Bm3 Mutant
Length = 470
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 107/216 (49%), Gaps = 11/216 (5%)
Query: 278 VMDVLISEA-KSRIASGQELNCYVDHLLS-----EVKSLTEQQISMLLWEPIIETSDTTL 331
VM+ L+ + R ASG++ + + H+L+ + L ++ I + +I +TT
Sbjct: 212 VMNDLVDKIIADRKASGEQSDDLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHETTS 271
Query: 332 VTTEWAMYELAKDPMRQDRLFQKIQSVCRSNKFTEENIAQVPYLGAVFHETLRKYSPAPI 391
+A+Y L K+P + ++ V + + + Q+ Y+G V +E LR + AP
Sbjct: 272 GLLSFALYFLVKNPHVLQKAAEEAARVLVDPVPSYKQVKQLKYVGMVLNEALRLWPTAPA 331
Query: 392 VPLRFAHEDTEIGG-YFIPAGSEIAINIYGCNMDKKQW-ENPDEWKPERFLDGQYDPADL 449
L +A EDT +GG Y + G E+ + I + DK W ++ +E++PERF + P
Sbjct: 332 FSL-YAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQHA 390
Query: 450 YKTMAFGTGKRVCAGSLQASLIACTAIGRLVQEFKW 485
+K FG G+R C G A A +G +++ F +
Sbjct: 391 FK--PFGNGQRACIGQQFALHEATLVLGMMLKHFDF 424
>pdb|2NNB|A Chain A, The Q403k Mutnat Heme Domain Of Flavocytochrome P450 Bm3
pdb|2NNB|B Chain B, The Q403k Mutnat Heme Domain Of Flavocytochrome P450 Bm3
Length = 471
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 107/216 (49%), Gaps = 11/216 (5%)
Query: 278 VMDVLISEA-KSRIASGQELNCYVDHLLS-----EVKSLTEQQISMLLWEPIIETSDTTL 331
VM+ L+ + R ASG++ + + H+L+ + L ++ I + +I +TT
Sbjct: 211 VMNDLVDKIIADRKASGEQSDDLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHETTS 270
Query: 332 VTTEWAMYELAKDPMRQDRLFQKIQSVCRSNKFTEENIAQVPYLGAVFHETLRKYSPAPI 391
+A+Y L K+P + ++ V + + + Q+ Y+G V +E LR + AP
Sbjct: 271 GLLSFALYFLVKNPHVLQKAAEEAARVLVDPVPSYKQVKQLKYVGMVLNEALRLWPTAPA 330
Query: 392 VPLRFAHEDTEIGG-YFIPAGSEIAINIYGCNMDKKQW-ENPDEWKPERFLDGQYDPADL 449
L +A EDT +GG Y + G E+ + I + DK W ++ +E++PERF + P
Sbjct: 331 FSL-YAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQHA 389
Query: 450 YKTMAFGTGKRVCAGSLQASLIACTAIGRLVQEFKW 485
+K FG G+R C G A A +G +++ F +
Sbjct: 390 FK--PFGNGQRACIGKQFALHEATLVLGMMLKHFDF 423
>pdb|2HPD|A Chain A, Crystal Structure Of Hemoprotein Domain Of P450bm-3, A
Prototype For Microsomal P450's
pdb|2HPD|B Chain B, Crystal Structure Of Hemoprotein Domain Of P450bm-3, A
Prototype For Microsomal P450's
pdb|1FAG|A Chain A, Structure Of Cytochrome P450
pdb|1FAG|B Chain B, Structure Of Cytochrome P450
pdb|1FAG|C Chain C, Structure Of Cytochrome P450
pdb|1FAG|D Chain D, Structure Of Cytochrome P450
Length = 471
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 107/216 (49%), Gaps = 11/216 (5%)
Query: 278 VMDVLISEA-KSRIASGQELNCYVDHLLS-----EVKSLTEQQISMLLWEPIIETSDTTL 331
VM+ L+ + R ASG++ + + H+L+ + L ++ I + +I +TT
Sbjct: 211 VMNDLVDKIIADRKASGEQSDDLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHETTS 270
Query: 332 VTTEWAMYELAKDPMRQDRLFQKIQSVCRSNKFTEENIAQVPYLGAVFHETLRKYSPAPI 391
+A+Y L K+P + ++ V + + + Q+ Y+G V +E LR + AP
Sbjct: 271 GLLSFALYFLVKNPHVLQKAAEEAARVLVDPVPSYKQVKQLKYVGMVLNEALRLWPTAPA 330
Query: 392 VPLRFAHEDTEIGG-YFIPAGSEIAINIYGCNMDKKQW-ENPDEWKPERFLDGQYDPADL 449
L +A EDT +GG Y + G E+ + I + DK W ++ +E++PERF + P
Sbjct: 331 FSL-YAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQHA 389
Query: 450 YKTMAFGTGKRVCAGSLQASLIACTAIGRLVQEFKW 485
+K FG G+R C G A A +G +++ F +
Sbjct: 390 FK--PFGNGQRACIGQQFALHEATLVLGMMLKHFDF 423
>pdb|2IJ2|A Chain A, Atomic Structure Of The Heme Domain Of Flavocytochrome
P450- Bm3
pdb|2IJ2|B Chain B, Atomic Structure Of The Heme Domain Of Flavocytochrome
P450- Bm3
Length = 470
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 107/216 (49%), Gaps = 11/216 (5%)
Query: 278 VMDVLISEA-KSRIASGQELNCYVDHLLS-----EVKSLTEQQISMLLWEPIIETSDTTL 331
VM+ L+ + R ASG++ + + H+L+ + L ++ I + +I +TT
Sbjct: 211 VMNDLVDKIIADRKASGEQSDDLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHETTS 270
Query: 332 VTTEWAMYELAKDPMRQDRLFQKIQSVCRSNKFTEENIAQVPYLGAVFHETLRKYSPAPI 391
+A+Y L K+P + ++ V + + + Q+ Y+G V +E LR + AP
Sbjct: 271 GLLSFALYFLVKNPHVLQKAAEEAARVLVDPVPSYKQVKQLKYVGMVLNEALRLWPTAPA 330
Query: 392 VPLRFAHEDTEIGG-YFIPAGSEIAINIYGCNMDKKQW-ENPDEWKPERFLDGQYDPADL 449
L +A EDT +GG Y + G E+ + I + DK W ++ +E++PERF + P
Sbjct: 331 FSL-YAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQHA 389
Query: 450 YKTMAFGTGKRVCAGSLQASLIACTAIGRLVQEFKW 485
+K FG G+R C G A A +G +++ F +
Sbjct: 390 FK--PFGNGQRACIGQQFALHEATLVLGMMLKHFDF 423
>pdb|3KX3|A Chain A, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
pdb|3KX3|B Chain B, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
Length = 470
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 107/216 (49%), Gaps = 11/216 (5%)
Query: 278 VMDVLISEA-KSRIASGQELNCYVDHLLS-----EVKSLTEQQISMLLWEPIIETSDTTL 331
VM+ L+ + R ASG++ + + H+L+ + L ++ I + +I +TT
Sbjct: 211 VMNDLVDKIIADRKASGEQSDDLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHETTS 270
Query: 332 VTTEWAMYELAKDPMRQDRLFQKIQSVCRSNKFTEENIAQVPYLGAVFHETLRKYSPAPI 391
+A+Y L K+P + ++ V + + + Q+ Y+G V +E LR + AP
Sbjct: 271 GLLSFALYFLVKNPHVLQKAAEEAARVLVDPVPSYKQVKQLKYVGMVLNEALRLWPTAPA 330
Query: 392 VPLRFAHEDTEIGG-YFIPAGSEIAINIYGCNMDKKQW-ENPDEWKPERFLDGQYDPADL 449
L +A EDT +GG Y + G E+ + I + DK W ++ +E++PERF + P
Sbjct: 331 FSL-YAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQHA 389
Query: 450 YKTMAFGTGKRVCAGSLQASLIACTAIGRLVQEFKW 485
+K FG G+R C G A A +G +++ F +
Sbjct: 390 FK--PFGNGQRACIGQQFALHEATLVLGMMLKHFDF 423
>pdb|3QI8|B Chain B, Evolved Variant Of Cytochrome P450 (Bm3, Cyp102a1)
pdb|3QI8|A Chain A, Evolved Variant Of Cytochrome P450 (Bm3, Cyp102a1)
Length = 472
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 106/216 (49%), Gaps = 11/216 (5%)
Query: 278 VMDVLISEA-KSRIASGQELNCYVDHLL-----SEVKSLTEQQISMLLWEPIIETSDTTL 331
VM+ L+ + R ASG++ + + H+L + L ++ I + +I +TT
Sbjct: 212 VMNDLVDKIIADRKASGEQSDDLLTHMLHGKDPETGEPLDDENIRYQIITFLIAGHETTS 271
Query: 332 VTTEWAMYELAKDPMRQDRLFQKIQSVCRSNKFTEENIAQVPYLGAVFHETLRKYSPAPI 391
+A+Y L K+P + ++ V + + + Q+ Y+G V +E LR + AP
Sbjct: 272 GLLTFALYFLVKNPHVLQKAAEEAARVLVDPVPSYKQVKQLKYVGMVLNEALRIWPTAPA 331
Query: 392 VPLRFAHEDTEIGG-YFIPAGSEIAINIYGCNMDKKQW-ENPDEWKPERFLDGQYDPADL 449
L +A EDT +GG Y + G E+ + I + DK W ++ +E++PERF + P
Sbjct: 332 FSL-YAKEDTMLGGEYPLEKGDELMVLIPQLHRDKTVWGDDVEEFRPERFENPSAIPQHA 390
Query: 450 YKTMAFGTGKRVCAGSLQASLIACTAIGRLVQEFKW 485
+K FG G+R C G A A +G +++ F +
Sbjct: 391 FK--PFGNGQRACIGQQFALHEATLVLGMMLKHFDF 424
>pdb|3QM4|A Chain A, Human Cytochrome P450 (Cyp) 2d6 - Prinomastat Complex
pdb|3QM4|B Chain B, Human Cytochrome P450 (Cyp) 2d6 - Prinomastat Complex
pdb|3TBG|A Chain A, Human Cytochrome P450 2d6 With Two Thioridazines Bound In
Active Site
pdb|3TBG|B Chain B, Human Cytochrome P450 2d6 With Two Thioridazines Bound In
Active Site
pdb|3TBG|C Chain C, Human Cytochrome P450 2d6 With Two Thioridazines Bound In
Active Site
pdb|3TBG|D Chain D, Human Cytochrome P450 2d6 With Two Thioridazines Bound In
Active Site
pdb|3TDA|A Chain A, Competitive Replacement Of Thioridazine By Prinomastat In
Crystals Of Cytochrome P450 2d6
pdb|3TDA|B Chain B, Competitive Replacement Of Thioridazine By Prinomastat In
Crystals Of Cytochrome P450 2d6
pdb|3TDA|C Chain C, Competitive Replacement Of Thioridazine By Prinomastat In
Crystals Of Cytochrome P450 2d6
pdb|3TDA|D Chain D, Competitive Replacement Of Thioridazine By Prinomastat In
Crystals Of Cytochrome P450 2d6
Length = 479
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 51/167 (30%), Positives = 73/167 (43%), Gaps = 7/167 (4%)
Query: 329 TTLVTTEWAMYELAKDPMRQDRLFQKIQSVCRSNKFTE-ENIAQVPYLGAVFHETLRKYS 387
TT T W + + P Q R+ Q+I V + E + A +PY AV HE R
Sbjct: 287 TTSTTLAWGLLLMILHPDVQRRVQQEIDDVIGQVRRPEMGDQAHMPYTTAVIHEVQRF-- 344
Query: 388 PAPIVPLRFAH---EDTEIGGYFIPAGSEIAINIYGCNMDKKQWENPDEWKPERFLDGQY 444
IVPL H D E+ G+ IP G+ + N+ D+ WE P + PE FLD Q
Sbjct: 345 -GDIVPLGVTHMTSRDIEVQGFRIPKGTTLITNLSSVLKDEAVWEKPFRFHPEHFLDAQG 403
Query: 445 DPADLYKTMAFGTGKRVCAGSLQASLIACTAIGRLVQEFKWNLREGE 491
+ F G+R C G A + L+Q F +++ G+
Sbjct: 404 HFVKPEAFLPFSAGRRACLGEPLARMELFLFFTSLLQHFSFSVPTGQ 450
>pdb|2F9Q|A Chain A, Crystal Structure Of Human Cytochrome P450 2d6
pdb|2F9Q|B Chain B, Crystal Structure Of Human Cytochrome P450 2d6
pdb|2F9Q|C Chain C, Crystal Structure Of Human Cytochrome P450 2d6
pdb|2F9Q|D Chain D, Crystal Structure Of Human Cytochrome P450 2d6
Length = 479
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 51/167 (30%), Positives = 73/167 (43%), Gaps = 7/167 (4%)
Query: 329 TTLVTTEWAMYELAKDPMRQDRLFQKIQSVCRSNKFTE-ENIAQVPYLGAVFHETLRKYS 387
TT T W + + P Q R+ Q+I V + E + A +PY AV HE R
Sbjct: 287 TTSTTLAWGLLLMILHPDVQRRVQQEIDDVIGQVRRPEMGDQAHMPYTTAVIHEVQRF-- 344
Query: 388 PAPIVPLRFAH---EDTEIGGYFIPAGSEIAINIYGCNMDKKQWENPDEWKPERFLDGQY 444
IVPL H D E+ G+ IP G+ + N+ D+ WE P + PE FLD Q
Sbjct: 345 -GDIVPLGMTHMTSRDIEVQGFRIPKGTTLITNLSSVLKDEAVWEKPFRFHPEHFLDAQG 403
Query: 445 DPADLYKTMAFGTGKRVCAGSLQASLIACTAIGRLVQEFKWNLREGE 491
+ F G+R C G A + L+Q F +++ G+
Sbjct: 404 HFVKPEAFLPFSAGRRACLGEPLARMELFLFFTSLLQHFSFSVPTGQ 450
>pdb|3EKD|A Chain A, Crystal Structure Of The A264m Heme Domain Of Cytochrome
P450 Bm3
pdb|3EKD|B Chain B, Crystal Structure Of The A264m Heme Domain Of Cytochrome
P450 Bm3
Length = 470
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 107/216 (49%), Gaps = 11/216 (5%)
Query: 278 VMDVLISEA-KSRIASGQELNCYVDHLLS-----EVKSLTEQQISMLLWEPIIETSDTTL 331
VM+ L+ + R ASG++ + + H+L+ + L ++ I + +I +TT
Sbjct: 211 VMNDLVDKIIADRKASGEQSDDLLTHMLNGKDPETGEPLDDENIRYQIITFLIMGHETTS 270
Query: 332 VTTEWAMYELAKDPMRQDRLFQKIQSVCRSNKFTEENIAQVPYLGAVFHETLRKYSPAPI 391
+A+Y L K+P + ++ V + + + Q+ Y+G V +E LR + AP
Sbjct: 271 GLLSFALYFLVKNPHVLQKAAEEAARVLVDPVPSYKQVKQLKYVGMVLNEALRLWPTAPA 330
Query: 392 VPLRFAHEDTEIGG-YFIPAGSEIAINIYGCNMDKKQW-ENPDEWKPERFLDGQYDPADL 449
L +A EDT +GG Y + G E+ + I + DK W ++ +E++PERF + P
Sbjct: 331 FSL-YAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQHA 389
Query: 450 YKTMAFGTGKRVCAGSLQASLIACTAIGRLVQEFKW 485
+K FG G+R C G A A +G +++ F +
Sbjct: 390 FK--PFGNGQRACIGQQFALHEATLVLGMMLKHFDF 423
>pdb|3M4V|A Chain A, Crystal Structure Of The A330p Mutant Of Cytochrome P450
Bm3
pdb|3M4V|B Chain B, Crystal Structure Of The A330p Mutant Of Cytochrome P450
Bm3
Length = 482
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 107/216 (49%), Gaps = 11/216 (5%)
Query: 278 VMDVLISEA-KSRIASGQELNCYVDHLLS-----EVKSLTEQQISMLLWEPIIETSDTTL 331
VM+ L+ + R ASG++ + + H+L+ + L ++ I + +I +TT
Sbjct: 212 VMNDLVDKIIADRKASGEQSDDLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHETTS 271
Query: 332 VTTEWAMYELAKDPMRQDRLFQKIQSVCRSNKFTEENIAQVPYLGAVFHETLRKYSPAPI 391
+A+Y L K+P + ++ V + + + Q+ Y+G V +E LR + AP
Sbjct: 272 GLLSFALYFLVKNPHVLQKAAEEAARVLVDPVPSYKQVKQLKYVGMVLNEALRLWPTAPP 331
Query: 392 VPLRFAHEDTEIGG-YFIPAGSEIAINIYGCNMDKKQW-ENPDEWKPERFLDGQYDPADL 449
L +A EDT +GG Y + G E+ + I + DK W ++ +E++PERF + P
Sbjct: 332 FSL-YAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQHA 390
Query: 450 YKTMAFGTGKRVCAGSLQASLIACTAIGRLVQEFKW 485
+K FG G+R C G A A +G +++ F +
Sbjct: 391 FK--PFGNGQRACIGQQFALHEATLVLGMMLKHFDF 424
>pdb|3PSX|A Chain A, Crystal Structure Of The Kt2 Mutant Of Cytochrome P450 Bm3
pdb|3PSX|B Chain B, Crystal Structure Of The Kt2 Mutant Of Cytochrome P450 Bm3
Length = 487
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 113/473 (23%), Positives = 190/473 (40%), Gaps = 81/473 (17%)
Query: 45 LAVKLPPVPEVPGRLPLIGNLLQLKEKKPHMTFTRWAEVYGPIYSIKTGASTMIVLNSAD 104
+ +K P P+ G L NL L KP + A+ G I+ + L+S
Sbjct: 6 MTIKEMPQPKTFGEL---KNLPLLNTDKPVQALMKIADELGEIFKFEAPGRVTRYLSSQR 62
Query: 105 VAKEAMVTRYPSISTRKLSNALKMLTSNKCMVATSDYDEFHKMAKRCLLTN-VLGGNAQK 163
+ KEA S + LS ALK + A L T+ N +K
Sbjct: 63 LIKEACDE---SRFDKNLSQALKFVRD---------------FAGDGLFTSWTHEKNWKK 104
Query: 164 RHRIHRDTMMENMSTQFHAHIMDNPLQLVNFRKIFESELFAVSMKQAVGKVVESIYVKEL 223
H I + + +HA ++D +QLV + ++ E I V E
Sbjct: 105 AHNILLPSFSQQAMKGYHAMMVDIAVQLVQKWERLNAD--------------EHIEVPED 150
Query: 224 GSTLSKDEVFKILVLDIMEGAIEVDWRDFFPYLRWVPNKGVEM----------KIQRLC- 272
+ L+ D + G ++R F + R P+ + K+QR
Sbjct: 151 MTRLTLDTI----------GLCGFNYR-FNSFYRDQPHPFITSMVRALDEAMNKLQRTNP 199
Query: 273 -------TRRQ-----AVMDVLISEA-KSRIASGQELNCYVDHLL-----SEVKSLTEQQ 314
+RQ VM+ L+ + R ASG++ + + H+L + L ++
Sbjct: 200 DDPAYDENKRQFQEDIKVMNDLVDKIIADRKASGEQSDDLLTHMLHGKDPETGEPLDDEN 259
Query: 315 ISMLLWEPIIETSDTTLVTTEWAMYELAKDPMRQDRLFQKIQSVCRSNKFTEENIAQVPY 374
I + +I +TT + +Y L K+P + ++ V + + + Q+ Y
Sbjct: 260 IRYQIVTFLIAGHETTSGLLSFTLYFLVKNPHVLQKAAEEAARVLVDPVPSYKQVKQLKY 319
Query: 375 LGAVFHETLRKYSPAPIVPLRFAHEDTEIGG-YFIPAGSEIAINIYGCNMDKKQW-ENPD 432
+G V +E LR + AP L +A EDT +GG Y + G EI + I + DK W ++ +
Sbjct: 320 VGMVLNEALRLWPTAPAFSL-YAKEDTVLGGEYPLEKGDEIMVLIPQLHRDKTIWGDDVE 378
Query: 433 EWKPERFLDGQYDPADLYKTMAFGTGKRVCAGSLQASLIACTAIGRLVQEFKW 485
E++PERF + P +K FG G+R C G A A +G +++ F +
Sbjct: 379 EFRPERFENPSAIPQHAFK--PFGNGQRACIGQQFALHEATLVLGMMLKHFDF 429
>pdb|1ZO4|A Chain A, Crystal Structure Of A328s Mutant Of The Heme Domain Of
P450bm-3
pdb|1ZO4|B Chain B, Crystal Structure Of A328s Mutant Of The Heme Domain Of
P450bm-3
Length = 473
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 112/473 (23%), Positives = 192/473 (40%), Gaps = 81/473 (17%)
Query: 45 LAVKLPPVPEVPGRLPLIGNLLQLKEKKPHMTFTRWAEVYGPIYSIKTGASTMIVLNSAD 104
+ +K P P+ G L NL L KP + A+ G I+ + L+S
Sbjct: 3 MTIKEMPQPKTFGEL---KNLPLLNTDKPVQALMKIADELGEIFKFEAPGRVTRYLSSQR 59
Query: 105 VAKEAMVTRYPSISTRKLSNALKMLTSNKCMVATSDYDEFHKMAKRCLLTN-VLGGNAQK 163
+ KEA S + LS ALK + A L T+ N +K
Sbjct: 60 LIKEACDE---SRFDKNLSQALKFVRD---------------FAGDGLFTSWTHEKNWKK 101
Query: 164 RHRIHRDTMMENMSTQFHAHIMDNPLQLVNFRKIFESELFAVSMKQAVGKVVESIYVKEL 223
H I + + +HA ++D +QLV + ++ E I V E
Sbjct: 102 AHNILLPSFSQQAMKGYHAMMVDIAVQLVQKWERLNAD--------------EHIEVPED 147
Query: 224 GSTLSKDEVFKILVLDIMEGAIEVDWRDFFPYLRWVPNKGVEM----------KIQRLC- 272
+ L+ D + G ++R F + R P+ + K+QR
Sbjct: 148 MTRLTLDTI----------GLCGFNYR-FNSFYRDQPHPFITSMVRALDEAMNKLQRANP 196
Query: 273 -------TRRQ-----AVMDVLISEA-KSRIASGQELNCYVDHLLS-----EVKSLTEQQ 314
+RQ VM+ L+ + R ASG++ + + H+L+ + L ++
Sbjct: 197 DDPAYDENKRQFQEDIKVMNDLVDKIIADRKASGEQSDDLLTHMLNGKDPETGEPLDDEN 256
Query: 315 ISMLLWEPIIETSDTTLVTTEWAMYELAKDPMRQDRLFQKIQSVCRSNKFTEENIAQVPY 374
I + +I +TT +A+Y L K+P + ++ V + + + Q+ Y
Sbjct: 257 IRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVLVDPVPSYKQVKQLKY 316
Query: 375 LGAVFHETLRKYSPAPIVPLRFAHEDTEIGG-YFIPAGSEIAINIYGCNMDKKQW-ENPD 432
+G V +E LR + +P L +A EDT +GG Y + G E+ + I + DK W ++ +
Sbjct: 317 VGMVLNEALRLWPTSPAFSL-YAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVE 375
Query: 433 EWKPERFLDGQYDPADLYKTMAFGTGKRVCAGSLQASLIACTAIGRLVQEFKW 485
E++PERF + P +K FG G+R C G A A +G +++ F +
Sbjct: 376 EFRPERFENPSAIPQHAFK--PFGNGQRACIGQQFALHEATLVLGMMLKHFDF 426
>pdb|3CBD|A Chain A, Directed Evolution Of Cytochrome P450 Bm3, To Octane
Monoxygenase 139-3
pdb|3CBD|B Chain B, Directed Evolution Of Cytochrome P450 Bm3, To Octane
Monoxygenase 139-3
Length = 455
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 107/216 (49%), Gaps = 11/216 (5%)
Query: 278 VMDVLISEA-KSRIASGQELNCYVDHLLS-----EVKSLTEQQISMLLWEPIIETSDTTL 331
VM+ L+ + R ASG++ + + +L+ + L + IS + +I +TT
Sbjct: 211 VMNDLVDKIIADRKASGEQSDDLLTQMLNGKDPETGEPLDDGNISYQIITFLIAGHETTS 270
Query: 332 VTTEWAMYELAKDPMRQDRLFQKIQSVCRSNKFTEENIAQVPYLGAVFHETLRKYSPAPI 391
+A+Y L K+P ++ ++ V + + + Q+ Y+G V +E LR + AP
Sbjct: 271 GLLSFALYFLVKNPHVLQKVAEEATRVLVDPVPSYKQVKQLKYVGMVLNEALRLWPTAPA 330
Query: 392 VPLRFAHEDTEIGG-YFIPAGSEIAINIYGCNMDKKQW-ENPDEWKPERFLDGQYDPADL 449
L +A EDT +GG Y + G E+ + I + DK W ++ +E++PERF + P
Sbjct: 331 FSL-YAKEDTVLGGEYPLEKGDEVMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQHA 389
Query: 450 YKTMAFGTGKRVCAGSLQASLIACTAIGRLVQEFKW 485
+K FG G+R C G A A +G +++ F +
Sbjct: 390 FK--PFGNGQRACIGQQFALHEATLVLGMMLKHFDF 423
>pdb|1P0X|A Chain A, F393y Mutant Heme Domain Of Flavocytochrome P450 Bm3
pdb|1P0X|B Chain B, F393y Mutant Heme Domain Of Flavocytochrome P450 Bm3
Length = 455
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 107/216 (49%), Gaps = 11/216 (5%)
Query: 278 VMDVLISEA-KSRIASGQELNCYVDHLLS-----EVKSLTEQQISMLLWEPIIETSDTTL 331
VM+ L+ + R ASG++ + + H+L+ + L ++ I + +I +TT
Sbjct: 211 VMNDLVDKIIADRKASGEQSDDLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHETTS 270
Query: 332 VTTEWAMYELAKDPMRQDRLFQKIQSVCRSNKFTEENIAQVPYLGAVFHETLRKYSPAPI 391
+A+Y L K+P + ++ V + + + Q+ Y+G V +E LR + AP
Sbjct: 271 GLLSFALYFLVKNPHVLQKAAEEAARVLVDPVPSYKQVKQLKYVGMVLNEALRLWPTAPA 330
Query: 392 VPLRFAHEDTEIGG-YFIPAGSEIAINIYGCNMDKKQW-ENPDEWKPERFLDGQYDPADL 449
L +A EDT +GG Y + G E+ + I + DK W ++ +E++PERF + P
Sbjct: 331 FSL-YAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQHA 389
Query: 450 YKTMAFGTGKRVCAGSLQASLIACTAIGRLVQEFKW 485
+K +G G+R C G A A +G +++ F +
Sbjct: 390 FK--PYGNGQRACIGQQFALHEATLVLGMMLKHFDF 423
>pdb|3MZS|A Chain A, Crystal Structure Of Cytochrome P450 Cyp11a1 In Complex
With 22- Hydroxy-Cholesterol
pdb|3MZS|B Chain B, Crystal Structure Of Cytochrome P450 Cyp11a1 In Complex
With 22- Hydroxy-Cholesterol
pdb|3MZS|C Chain C, Crystal Structure Of Cytochrome P450 Cyp11a1 In Complex
With 22- Hydroxy-Cholesterol
pdb|3MZS|D Chain D, Crystal Structure Of Cytochrome P450 Cyp11a1 In Complex
With 22- Hydroxy-Cholesterol
Length = 486
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 52/189 (27%), Positives = 93/189 (49%), Gaps = 6/189 (3%)
Query: 328 DTTLVTTEWAMYELAKDPMRQDRLFQKIQSVCRSNKFTEENIAQ-VPYLGAVFHETLRKY 386
+TT +T +W +YE+A+ Q+ L +++ + R + + Q VP L A ETLR +
Sbjct: 290 NTTSMTLQWHLYEMARSLNVQEMLREEVLNARRQAEGDISKMLQMVPLLKASIKETLRLH 349
Query: 387 SPAPIVPLRFAHEDTEIGGYFIPAGSEIAINIYGCNMDKKQWENPDEWKPERFLDGQYDP 446
P + R+ D + Y IPA + + + IY D + +PD++ P R+L D
Sbjct: 350 -PISVTLQRYPESDLVLQDYLIPAKTLVQVAIYAMGRDPAFFSSPDKFDPTRWLSKDKDL 408
Query: 447 ADLYKTMAFGTGKRVCAGSLQASLIACTAIGRLVQEFKWNLRE-GEEESVDTVGLTTHKL 505
++ + FG G R C G A L + +++ FK ++ G+ +++ + LT K
Sbjct: 409 IH-FRNLGFGWGVRQCVGRRIAELEMTLFLIHILENFKVEMQHIGDVDTIFNLILTPDK- 466
Query: 506 HPLHAIIRP 514
P+ + RP
Sbjct: 467 -PIFLVFRP 474
>pdb|3EKB|A Chain A, Crystal Structure Of The A264c Mutant Heme Domain Of
Cytochrome P450 Bm3
pdb|3EKB|B Chain B, Crystal Structure Of The A264c Mutant Heme Domain Of
Cytochrome P450 Bm3
Length = 470
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 107/216 (49%), Gaps = 11/216 (5%)
Query: 278 VMDVLISEA-KSRIASGQELNCYVDHLLS-----EVKSLTEQQISMLLWEPIIETSDTTL 331
VM+ L+ + R ASG++ + + H+L+ + L ++ I + +I +TT
Sbjct: 211 VMNDLVDKIIADRKASGEQSDDLLTHMLNGKDPETGEPLDDENIRYQIITFLICGHETTS 270
Query: 332 VTTEWAMYELAKDPMRQDRLFQKIQSVCRSNKFTEENIAQVPYLGAVFHETLRKYSPAPI 391
+A+Y L K+P + ++ V + + + Q+ Y+G V +E LR + AP
Sbjct: 271 GLLSFALYFLVKNPHVLQKAAEEAARVLVDPVPSYKQVKQLKYVGMVLNEALRLWPTAPA 330
Query: 392 VPLRFAHEDTEIGG-YFIPAGSEIAINIYGCNMDKKQW-ENPDEWKPERFLDGQYDPADL 449
L +A EDT +GG Y + G E+ + I + DK W ++ +E++PERF + P
Sbjct: 331 FSL-YAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQHA 389
Query: 450 YKTMAFGTGKRVCAGSLQASLIACTAIGRLVQEFKW 485
+K FG G+R C G A A +G +++ F +
Sbjct: 390 FK--PFGNGQRACIGQQFALHEATLVLGMMLKHFDF 423
>pdb|1ZOA|A Chain A, Crystal Structure Of A328v Mutant Of The Heme Domain Of
P450bm-3 With N-Palmitoylglycine
pdb|1ZOA|B Chain B, Crystal Structure Of A328v Mutant Of The Heme Domain Of
P450bm-3 With N-Palmitoylglycine
Length = 473
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 112/473 (23%), Positives = 191/473 (40%), Gaps = 81/473 (17%)
Query: 45 LAVKLPPVPEVPGRLPLIGNLLQLKEKKPHMTFTRWAEVYGPIYSIKTGASTMIVLNSAD 104
+ +K P P+ G L NL L KP + A+ G I+ + L+S
Sbjct: 3 MTIKEMPQPKTFGEL---KNLPLLNTDKPVQALMKIADELGEIFKFEAPGRVTRYLSSQR 59
Query: 105 VAKEAMVTRYPSISTRKLSNALKMLTSNKCMVATSDYDEFHKMAKRCLLTN-VLGGNAQK 163
+ KEA S + LS ALK + A L T+ N +K
Sbjct: 60 LIKEACDE---SRFDKNLSQALKFVRD---------------FAGDGLFTSWTHEKNWKK 101
Query: 164 RHRIHRDTMMENMSTQFHAHIMDNPLQLVNFRKIFESELFAVSMKQAVGKVVESIYVKEL 223
H I + + +HA ++D +QLV + ++ E I V E
Sbjct: 102 AHNILLPSFSQQAMKGYHAMMVDIAVQLVQKWERLNAD--------------EHIEVPED 147
Query: 224 GSTLSKDEVFKILVLDIMEGAIEVDWRDFFPYLRWVPNKGVEM----------KIQRLC- 272
+ L+ D + G ++R F + R P+ + K+QR
Sbjct: 148 MTRLTLDTI----------GLCGFNYR-FNSFYRDQPHPFITSMVRALDEAMNKLQRANP 196
Query: 273 -------TRRQ-----AVMDVLISEA-KSRIASGQELNCYVDHLLS-----EVKSLTEQQ 314
+RQ VM+ L+ + R ASG++ + + H+L+ + L ++
Sbjct: 197 DDPAYDENKRQFQEDIKVMNDLVDKIIADRKASGEQSDDLLTHMLNGKDPETGEPLDDEN 256
Query: 315 ISMLLWEPIIETSDTTLVTTEWAMYELAKDPMRQDRLFQKIQSVCRSNKFTEENIAQVPY 374
I + +I +TT +A+Y L K+P + ++ V + + + Q+ Y
Sbjct: 257 IRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVLVDPVPSYKQVKQLKY 316
Query: 375 LGAVFHETLRKYSPAPIVPLRFAHEDTEIGG-YFIPAGSEIAINIYGCNMDKKQW-ENPD 432
+G V +E LR + P L +A EDT +GG Y + G E+ + I + DK W ++ +
Sbjct: 317 VGMVLNEALRLWPTVPAFSL-YAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVE 375
Query: 433 EWKPERFLDGQYDPADLYKTMAFGTGKRVCAGSLQASLIACTAIGRLVQEFKW 485
E++PERF + P +K FG G+R C G A A +G +++ F +
Sbjct: 376 EFRPERFENPSAIPQHAFK--PFGNGQRACIGQQFALHEATLVLGMMLKHFDF 426
>pdb|1YQP|A Chain A, T268n Mutant Cytochrome Domain Of Flavocytochrome P450 Bm3
pdb|1YQP|B Chain B, T268n Mutant Cytochrome Domain Of Flavocytochrome P450 Bm3
Length = 455
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 106/216 (49%), Gaps = 11/216 (5%)
Query: 278 VMDVLISEA-KSRIASGQELNCYVDHLLS-----EVKSLTEQQISMLLWEPIIETSDTTL 331
VM+ L+ + R ASG++ + + H+L+ + L ++ I + +I + T
Sbjct: 211 VMNDLVDKIIADRKASGEQSDDLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHENTS 270
Query: 332 VTTEWAMYELAKDPMRQDRLFQKIQSVCRSNKFTEENIAQVPYLGAVFHETLRKYSPAPI 391
+A+Y L K+P + ++ V + + + Q+ Y+G V +E LR + AP
Sbjct: 271 GLLSFALYFLVKNPHVLQKAAEEAARVLVDPVPSYKQVKQLKYVGMVLNEALRLWPTAPA 330
Query: 392 VPLRFAHEDTEIGG-YFIPAGSEIAINIYGCNMDKKQW-ENPDEWKPERFLDGQYDPADL 449
L +A EDT +GG Y + G E+ + I + DK W ++ +E++PERF + P
Sbjct: 331 FSL-YAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQHA 389
Query: 450 YKTMAFGTGKRVCAGSLQASLIACTAIGRLVQEFKW 485
+K FG G+R C G A A +G +++ F +
Sbjct: 390 FK--PFGNGQRACIGQQFALHEATLVLGMMLKHFDF 423
>pdb|1YQO|A Chain A, T268a Mutant Heme Domain Of Flavocytochrome P450 Bm3
pdb|1YQO|B Chain B, T268a Mutant Heme Domain Of Flavocytochrome P450 Bm3
Length = 455
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 106/216 (49%), Gaps = 11/216 (5%)
Query: 278 VMDVLISEA-KSRIASGQELNCYVDHLLS-----EVKSLTEQQISMLLWEPIIETSDTTL 331
VM+ L+ + R ASG++ + + H+L+ + L ++ I + +I + T
Sbjct: 211 VMNDLVDKIIADRKASGEQSDDLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHEATS 270
Query: 332 VTTEWAMYELAKDPMRQDRLFQKIQSVCRSNKFTEENIAQVPYLGAVFHETLRKYSPAPI 391
+A+Y L K+P + ++ V + + + Q+ Y+G V +E LR + AP
Sbjct: 271 GLLSFALYFLVKNPHVLQKAAEEAARVLVDPVPSYKQVKQLKYVGMVLNEALRLWPTAPA 330
Query: 392 VPLRFAHEDTEIGG-YFIPAGSEIAINIYGCNMDKKQW-ENPDEWKPERFLDGQYDPADL 449
L +A EDT +GG Y + G E+ + I + DK W ++ +E++PERF + P
Sbjct: 331 FSL-YAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQHA 389
Query: 450 YKTMAFGTGKRVCAGSLQASLIACTAIGRLVQEFKW 485
+K FG G+R C G A A +G +++ F +
Sbjct: 390 FK--PFGNGQRACIGQQFALHEATLVLGMMLKHFDF 423
>pdb|4DU2|B Chain B, Cytochrome P450 Bm3h-B7 Mri Sensor Bound To Dopamine
pdb|4DU2|A Chain A, Cytochrome P450 Bm3h-B7 Mri Sensor Bound To Dopamine
Length = 470
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 105/216 (48%), Gaps = 11/216 (5%)
Query: 278 VMDVLISEA-KSRIASGQELNCYVDHLLS-----EVKSLTEQQISMLLWEPIIETSDTTL 331
VM+ L+ + R ASG++ + + H+L+ + L ++ I + + + T
Sbjct: 212 VMNDLVDKIIADRKASGEQSDDLLTHMLNGKDPETGEPLDDENIRYQIITFLAAGHEATS 271
Query: 332 VTTEWAMYELAKDPMRQDRLFQKIQSVCRSNKFTEENIAQVPYLGAVFHETLRKYSPAPI 391
+A+Y L K+P + ++ V + + + Q+ Y+G V +E LR + AP
Sbjct: 272 GLLSFALYFLVKNPHELQKAAEEAARVLVDPVPSHKQVKQLKYVGMVLNEALRLWPTAPA 331
Query: 392 VPLRFAHEDTEIGG-YFIPAGSEIAINIYGCNMDKKQW-ENPDEWKPERFLDGQYDPADL 449
L +A EDT +GG Y + G E+ + I + DK W ++ +E++PERF + P
Sbjct: 332 FSL-YAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTVWGDDVEEFRPERFENPSAIPQHA 390
Query: 450 YKTMAFGTGKRVCAGSLQASLIACTAIGRLVQEFKW 485
+K FG G+R C G A A +G +++ F +
Sbjct: 391 FK--PFGNGQRACIGQQFALHEATLVLGMMLKHFDF 424
>pdb|3DGI|A Chain A, Crystal Structure Of F87aT268A MUTANT OF CYP BM3
pdb|3DGI|B Chain B, Crystal Structure Of F87aT268A MUTANT OF CYP BM3
Length = 461
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 106/216 (49%), Gaps = 11/216 (5%)
Query: 278 VMDVLISEA-KSRIASGQELNCYVDHLLS-----EVKSLTEQQISMLLWEPIIETSDTTL 331
VM+ L+ + R ASG++ + + H+L+ + L ++ I + +I + T
Sbjct: 211 VMNDLVDKIIADRKASGEQSDDLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHEATS 270
Query: 332 VTTEWAMYELAKDPMRQDRLFQKIQSVCRSNKFTEENIAQVPYLGAVFHETLRKYSPAPI 391
+A+Y L K+P + ++ V + + + Q+ Y+G V +E LR + AP
Sbjct: 271 GLLSFALYFLVKNPHVLQKAAEEAARVLVDPVPSYKQVKQLKYVGMVLNEALRLWPTAPA 330
Query: 392 VPLRFAHEDTEIGG-YFIPAGSEIAINIYGCNMDKKQW-ENPDEWKPERFLDGQYDPADL 449
L +A EDT +GG Y + G E+ + I + DK W ++ +E++PERF + P
Sbjct: 331 FSL-YAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQHA 389
Query: 450 YKTMAFGTGKRVCAGSLQASLIACTAIGRLVQEFKW 485
+K FG G+R C G A A +G +++ F +
Sbjct: 390 FK--PFGNGQRACIGQQFALHEATLVLGMMLKHFDF 423
>pdb|1FAH|A Chain A, Structure Of Cytochrome P450
pdb|1FAH|B Chain B, Structure Of Cytochrome P450
Length = 471
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 106/216 (49%), Gaps = 11/216 (5%)
Query: 278 VMDVLISEA-KSRIASGQELNCYVDHLLS-----EVKSLTEQQISMLLWEPIIETSDTTL 331
VM+ L+ + R ASG++ + + H+L+ + L ++ I + +I + T
Sbjct: 211 VMNDLVDKIIADRKASGEQSDDLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHEATS 270
Query: 332 VTTEWAMYELAKDPMRQDRLFQKIQSVCRSNKFTEENIAQVPYLGAVFHETLRKYSPAPI 391
+A+Y L K+P + ++ V + + + Q+ Y+G V +E LR + AP
Sbjct: 271 GLLSFALYFLVKNPHVLQKAAEEAARVLVDPVPSYKQVKQLKYVGMVLNEALRLWPTAPA 330
Query: 392 VPLRFAHEDTEIGG-YFIPAGSEIAINIYGCNMDKKQW-ENPDEWKPERFLDGQYDPADL 449
L +A EDT +GG Y + G E+ + I + DK W ++ +E++PERF + P
Sbjct: 331 FSL-YAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQHA 389
Query: 450 YKTMAFGTGKRVCAGSLQASLIACTAIGRLVQEFKW 485
+K FG G+R C G A A +G +++ F +
Sbjct: 390 FK--PFGNGQRACIGQQFALHEATLVLGMMLKHFDF 423
>pdb|1P0W|A Chain A, F393w Mutant Heme Domain Of Flavocytochrome P450 Bm3
pdb|1P0W|B Chain B, F393w Mutant Heme Domain Of Flavocytochrome P450 Bm3
Length = 455
Score = 72.0 bits (175), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 107/216 (49%), Gaps = 11/216 (5%)
Query: 278 VMDVLISEA-KSRIASGQELNCYVDHLLS-----EVKSLTEQQISMLLWEPIIETSDTTL 331
VM+ L+ + R ASG++ + + H+L+ + L ++ I + +I +TT
Sbjct: 211 VMNDLVDKIIADRKASGEQSDDLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHETTS 270
Query: 332 VTTEWAMYELAKDPMRQDRLFQKIQSVCRSNKFTEENIAQVPYLGAVFHETLRKYSPAPI 391
+A+Y L K+P + ++ V + + + Q+ Y+G V +E LR + AP
Sbjct: 271 GLLSFALYFLVKNPHVLQKAAEEAARVLVDPVPSYKQVKQLKYVGMVLNEALRLWPTAPA 330
Query: 392 VPLRFAHEDTEIGG-YFIPAGSEIAINIYGCNMDKKQW-ENPDEWKPERFLDGQYDPADL 449
L +A EDT +GG Y + G E+ + I + DK W ++ +E++PERF + P
Sbjct: 331 FSL-YAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQHA 389
Query: 450 YKTMAFGTGKRVCAGSLQASLIACTAIGRLVQEFKW 485
+K +G G+R C G A A +G +++ F +
Sbjct: 390 FK--PWGNGQRACIGQQFALHEATLVLGMMLKHFDF 423
>pdb|1JME|A Chain A, Crystal Structure Of Phe393his Cytochrome P450 Bm3
pdb|1JME|B Chain B, Crystal Structure Of Phe393his Cytochrome P450 Bm3
Length = 455
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 106/216 (49%), Gaps = 11/216 (5%)
Query: 278 VMDVLISEA-KSRIASGQELNCYVDHLLS-----EVKSLTEQQISMLLWEPIIETSDTTL 331
VM+ L+ + R ASG++ + + H+L+ + L ++ I + +I +TT
Sbjct: 211 VMNDLVDKIIADRKASGEQSDDLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHETTS 270
Query: 332 VTTEWAMYELAKDPMRQDRLFQKIQSVCRSNKFTEENIAQVPYLGAVFHETLRKYSPAPI 391
+A+Y L K+P + ++ V + + + Q+ Y+G V +E LR + AP
Sbjct: 271 GLLSFALYFLVKNPHVLQKAAEEAARVLVDPVPSYKQVKQLKYVGMVLNEALRLWPTAPA 330
Query: 392 VPLRFAHEDTEIGG-YFIPAGSEIAINIYGCNMDKKQW-ENPDEWKPERFLDGQYDPADL 449
L +A EDT +GG Y + G E+ + I + DK W ++ +E++PERF + P
Sbjct: 331 FSL-YAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQHA 389
Query: 450 YKTMAFGTGKRVCAGSLQASLIACTAIGRLVQEFKW 485
+K G G+R C G A A +G +++ F +
Sbjct: 390 FK--PHGNGQRACIGQQFALHEATLVLGMMLKHFDF 423
>pdb|1P0V|A Chain A, F393a Mutant Heme Domain Of Flavocytochrome P450 Bm3
pdb|1P0V|B Chain B, F393a Mutant Heme Domain Of Flavocytochrome P450 Bm3
Length = 455
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 106/216 (49%), Gaps = 11/216 (5%)
Query: 278 VMDVLISEA-KSRIASGQELNCYVDHLLS-----EVKSLTEQQISMLLWEPIIETSDTTL 331
VM+ L+ + R ASG++ + + H+L+ + L ++ I + +I +TT
Sbjct: 211 VMNDLVDKIIADRKASGEQSDDLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHETTS 270
Query: 332 VTTEWAMYELAKDPMRQDRLFQKIQSVCRSNKFTEENIAQVPYLGAVFHETLRKYSPAPI 391
+A+Y L K+P + ++ V + + + Q+ Y+G V +E LR + AP
Sbjct: 271 GLLSFALYFLVKNPHVLQKAAEEAARVLVDPVPSYKQVKQLKYVGMVLNEALRLWPTAPA 330
Query: 392 VPLRFAHEDTEIGG-YFIPAGSEIAINIYGCNMDKKQW-ENPDEWKPERFLDGQYDPADL 449
L +A EDT +GG Y + G E+ + I + DK W ++ +E++PERF + P
Sbjct: 331 FSL-YAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQHA 389
Query: 450 YKTMAFGTGKRVCAGSLQASLIACTAIGRLVQEFKW 485
+K G G+R C G A A +G +++ F +
Sbjct: 390 FKPA--GNGQRACIGQQFALHEATLVLGMMLKHFDF 423
>pdb|4DTW|B Chain B, Cytochrome P450 Bm3h-8c8 Mri Sensor Bound To Serotonin
pdb|4DTW|A Chain A, Cytochrome P450 Bm3h-8c8 Mri Sensor Bound To Serotonin
pdb|4DTY|B Chain B, Cytochrome P450 Bm3h-8c8 Mri Sensor, No Ligand
pdb|4DTY|A Chain A, Cytochrome P450 Bm3h-8c8 Mri Sensor, No Ligand
pdb|4DTZ|A Chain A, Cytochrome P450 Bm3h-8c8 Mri Sensor Bound To Dopamine
pdb|4DTZ|B Chain B, Cytochrome P450 Bm3h-8c8 Mri Sensor Bound To Dopamine
Length = 469
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 105/216 (48%), Gaps = 11/216 (5%)
Query: 278 VMDVLISEA-KSRIASGQELNCYVDHLLS-----EVKSLTEQQISMLLWEPIIETSDTTL 331
VM+ L+ + R ASG++ + + H+L+ + L ++ I + + + T
Sbjct: 211 VMNDLVDKIIADRKASGEQSDDLLTHMLNGKDPETGEPLDDENIRYQIITFLAAGHEATS 270
Query: 332 VTTEWAMYELAKDPMRQDRLFQKIQSVCRSNKFTEENIAQVPYLGAVFHETLRKYSPAPI 391
+A+Y L K+P + ++ V + + + Q+ Y+G V +E LR + AP
Sbjct: 271 GLLSFALYFLVKNPHELQKAAEEAARVLVDPVPSYKQVKQLKYVGMVLNEALRLWPTAPA 330
Query: 392 VPLRFAHEDTEIGG-YFIPAGSEIAINIYGCNMDKKQW-ENPDEWKPERFLDGQYDPADL 449
L +A EDT +GG Y + G E+ + I + DK W ++ +E++PERF + P
Sbjct: 331 FSL-YAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQHA 389
Query: 450 YKTMAFGTGKRVCAGSLQASLIACTAIGRLVQEFKW 485
+K FG G+R C G A A +G +++ F +
Sbjct: 390 FK--PFGNGQRACIGQQFALHEATLVLGMMLKHFDF 423
>pdb|3LD6|A Chain A, Crystal Structure Of Human Lanosterol 14alpha-Demethylase
(C Complex With Ketoconazole
pdb|3LD6|B Chain B, Crystal Structure Of Human Lanosterol 14alpha-Demethylase
(C Complex With Ketoconazole
pdb|3JUS|A Chain A, Crystal Structure Of Human Lanosterol 14alpha-Demethylase
(Cyp51) In Complex With Econazole
pdb|3JUS|B Chain B, Crystal Structure Of Human Lanosterol 14alpha-Demethylase
(Cyp51) In Complex With Econazole
pdb|3JUV|A Chain A, Crystal Structure Of Human Lanosterol 14alpha-Demethylase
(C
Length = 461
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 102/484 (21%), Positives = 195/484 (40%), Gaps = 49/484 (10%)
Query: 46 AVKLPPVPEVPGRLPLIGNLLQLKEKKPHMTFTRWAEVYGPIYSIKTGASTMIVLNSADV 105
VK PP P +P +G+ + K P E YGP++S T L +D
Sbjct: 9 GVKSPPYIFSP--IPFLGHAIAFG-KSPIEFLENAYEKYGPVFSFTMVGKTFTYLLGSDA 65
Query: 106 AKEAMVTRYPSISTRKLSNALKMLTSNKCM---VATSDYDEFHKMAKRCLLTNVLGGNAQ 162
A ++ ++ + + L K + V + E KM K L N+
Sbjct: 66 AALLFNSKNEDLNAEDVYSRLTTPVFGKGVAYDVPNPVFLEQKKMLKSGL--NIA----- 118
Query: 163 KRHRIHRDTMMENMSTQFHAHIMDNPLQLVNFRKIFE--SELFAVSMKQAVGKVVESIYV 220
H +++E + ++ ++ + +FE SEL ++ ++
Sbjct: 119 --HFKQHVSIIEKETKEYFESWGES-----GEKNVFEALSELIILTASHC-------LHG 164
Query: 221 KELGSTLSKDEVFKILVLDIMEGAIEVDWRDFFPYLRWVPNKGVEMKIQRLCTRRQAVMD 280
KE+ S L +E L D+ G W P W+P +R + + D
Sbjct: 165 KEIRSQL--NEKVAQLYADLDGGFSHAAW--LLP--GWLPLPS----FRRRDRAHREIKD 214
Query: 281 VLISEAKSRIASGQELNCYVDHLLS----EVKSLTEQQISMLLWEPIIETSDTTLVTTEW 336
+ + R S ++++ + LL + + LT+ +++ +L ++ T+ T+ W
Sbjct: 215 IFYKAIQKRRQSQEKIDDILQTLLDATYKDGRPLTDDEVAGMLIGLLLAGQHTSSTTSAW 274
Query: 337 AMYELAKDPMRQDRLFQKIQSVCRSN--KFTEENIAQVPYLGAVFHETLRKYSPAPIVPL 394
+ LA+D Q + + + ++VC N T + + + L ETLR P I+ +
Sbjct: 275 MGFFLARDKTLQKKCYLEQKTVCGENLPPLTYDQLKDLNLLDRCIKETLRLRPPIMIM-M 333
Query: 395 RFAHEDTEIGGYFIPAGSEIAINIYGCNMDKKQWENPDEWKPERFLDGQYDPADLYKTMA 454
R A + GY IP G ++ ++ K W ++ P+R+L + + +
Sbjct: 334 RMARTPQTVAGYTIPPGHQVCVSPTVNQRLKDSWVERLDFNPDRYLQDNPASGEKFAYVP 393
Query: 455 FGTGKRVCAGSLQASLIACTAIGRLVQEFKWNLREGEEESVDTVGLTTHKLHPLHAIIRP 514
FG G+ C G A + T +++ ++++L +G TV TT P + +IR
Sbjct: 394 FGAGRHRCIGENFAYVQIKTIWSTMLRLYEFDLIDG---YFPTVNYTTMIHTPENPVIRY 450
Query: 515 RPRN 518
+ R+
Sbjct: 451 KRRS 454
>pdb|3EQM|A Chain A, Crystal Structure Of Human Placental Aromatase Cytochrome
P450 In Complex With Androstenedione
pdb|3S79|A Chain A, Human Placental Aromatase Cytochrome P450 (Cyp19a1)
Refined At 2.75 Angstrom
pdb|3S7S|A Chain A, Crystal Structure Of Human Placental Aromatase Complexed
With Breast Cancer Drug Exemestane
pdb|4GL5|A Chain A, Structure Of Human Placental Aromatase Complexed With
Designed Inhibitor Hddg029 (Compound 4)
pdb|4GL7|A Chain A, Structure Of Human Placental Aromatase Complexed With
Designed Inhibitor Hddg046 (Compound 5)
Length = 503
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 71/277 (25%), Positives = 134/277 (48%), Gaps = 25/277 (9%)
Query: 251 DFFPYLRWVPNKGVEMKIQRLCTRRQAVMDVLISEAKSRIASGQELNCYVDH----LLSE 306
D F + W+ K E ++ L + ++VLI+E + RI++ ++L +D +L+E
Sbjct: 232 DIFFKISWLYKK-YEKSVKDL----KDAIEVLIAEKRRRISTEEKLEECMDFATELILAE 286
Query: 307 VKS-LTEQQISMLLWEPIIETSDTTLVTTEWAMYELAKDPMRQDRLFQKIQSVCRSNKFT 365
+ LT + ++ + E +I DT V+ + ++ +AK P ++ + ++IQ+V
Sbjct: 287 KRGDLTRENVNQCILEMLIAAPDTMSVSLFFMLFLIAKHPNVEEAIIKEIQTVIGERDIK 346
Query: 366 EENIAQVPYLGAVFHETLRKYSPAPIVPLRFAHEDTEIGGYFIPAGSEIAINIYGCNMDK 425
++I ++ + +E++R Y P + +R A ED I GY + G+ I +NI G
Sbjct: 347 IDDIQKLKVMENFIYESMR-YQPVVDLVMRKALEDDVIDGYPVKKGTNIILNI-GRMHRL 404
Query: 426 KQWENPDEWKPERFLDGQYDPADLYKTMAFGTGKRVCAGSLQASLIACTAIGRLVQEFKW 485
+ + P+E+ E F + P ++ FG G R CAG A ++ + L++ F
Sbjct: 405 EFFPKPNEFTLENF--AKNVPYRYFQ--PFGFGPRGCAGKYIAMVMMKAILVTLLRRFHV 460
Query: 486 NLREGE-EESVDTVGLTTHKLHP------LHAIIRPR 515
+G+ ES+ + + LHP L I PR
Sbjct: 461 KTLQGQCVESIQKIHDLS--LHPDETKNMLEMIFTPR 495
>pdb|2Q9F|A Chain A, Crystal Structure Of Human Cytochrome P450 46a1 In Complex
With Cholesterol-3-Sulphate
pdb|2Q9G|A Chain A, Crystal Structure Of Human Cytochrome P450 46a1
pdb|3MDM|A Chain A, Thioperamide Complex Of Cytochrome P450 46a1
pdb|3MDR|A Chain A, Tranylcypromine Complex Of Cytochrome P450 46a1
pdb|3MDR|B Chain B, Tranylcypromine Complex Of Cytochrome P450 46a1
pdb|3MDT|A Chain A, Voriconazole Complex Of Cytochrome P450 46a1
pdb|3MDT|B Chain B, Voriconazole Complex Of Cytochrome P450 46a1
pdb|3MDV|A Chain A, Clotrimazole Complex Of Cytochrome P450 46a1
pdb|3MDV|B Chain B, Clotrimazole Complex Of Cytochrome P450 46a1
pdb|4ENH|A Chain A, Crystal Structure Of Human Cytochrome P450 Cyp46a1 With
Fluvoxamine Bound
pdb|4FIA|A Chain A, Crystal Structure Of Human Cyp46a1 P450 With Bicalutamide
Bound
Length = 456
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 97/456 (21%), Positives = 177/456 (38%), Gaps = 47/456 (10%)
Query: 77 FTRWAEVYGPIYSIKTGASTMIVLNSAD-VAKEAMVTRYPSIST--RKLSNALKMLTSNK 133
F WA+ YGP+ + T +++ S + V K M T+Y S R L +
Sbjct: 16 FLDWAKKYGPVVRVNVFHKTSVIVTSPESVKKFLMSTKYNKDSKMYRALQTVFGERLFGQ 75
Query: 134 CMVATSDYDEFHKMAKRCLLTNVLGGNAQKRHRIHRDTMMENMSTQFHAHIMDNPLQLVN 193
+V+ +Y+ +HK + L R +++ M T + QLV
Sbjct: 76 GLVSECNYERWHKQRRVIDLA------------FSRSSLVSLMET-----FNEKAEQLVE 118
Query: 194 FRKIFESELFAVSMKQAVGKVVESIYVKE---------LGSTLSKDEVFKILVLDIMEGA 244
+ VSM+ + I K LG+ + K+++ I
Sbjct: 119 ILEAKADGQTPVSMQDMLTYTAMDILAKAAFGMETSMLLGAQKPLSQAVKLMLEGITASR 178
Query: 245 IEVDWRDFFPYLRWVPNKGVEMKIQRLCTR--RQAVMDVLISEAKSRIASGQEL--NCYV 300
+ +++P K +++ R R RQ D + + + G+E+ +
Sbjct: 179 NTL--------AKFLPGKRKQLREVRESIRFLRQVGRD-WVQRRREALKRGEEVPADILT 229
Query: 301 DHLLSEVKSLTEQQISMLLWEPIIETSDTTLVTTEWAMYELAKDPMRQDRLFQKIQSVCR 360
L +E + ++ + I +T+ + + EL++ P RL ++ V
Sbjct: 230 QILKAEEGAQDDEGLLDNFVTFFIAGHETSANHLAFTVMELSRQPEIVARLQAEVDEVIG 289
Query: 361 SNKFTE-ENIAQVPYLGAVFHETLRKYSPAPIVPLRFAHEDTEIGGYFIPAGSEIAINIY 419
S ++ + E++ ++ YL V E+LR Y PA R E+T I G +P + + + Y
Sbjct: 290 SKRYLDFEDLGRLQYLSQVLKESLRLYPPA-WGTFRLLEEETLIDGVRVPGNTPLLFSTY 348
Query: 420 GCNMDKKQWENPDEWKPERFLDGQYDPADLYKTMAFGTGKRVCAGSLQASLIACTAIGRL 479
+E+P + P+RF G P Y F G R C G A + + +L
Sbjct: 349 VMGRMDTYFEDPLTFNPDRFGPGAPKPRFTY--FPFSLGHRSCIGQQFAQMEVKVVMAKL 406
Query: 480 VQEFKWNLREGEEESVDTVGLTTHKLHPLHAIIRPR 515
+Q ++ L G+ + T L P+ +RPR
Sbjct: 407 LQRLEFRLVPGQRFGLQEQA-TLKPLDPVLCTLRPR 441
>pdb|4DUB|A Chain A, Cytochrome P450 Bm3h-9d7 Mri Sensor Bound To Dopamine
pdb|4DUB|B Chain B, Cytochrome P450 Bm3h-9d7 Mri Sensor Bound To Dopamine
Length = 472
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 110/473 (23%), Positives = 189/473 (39%), Gaps = 81/473 (17%)
Query: 45 LAVKLPPVPEVPGRLPLIGNLLQLKEKKPHMTFTRWAEVYGPIYSIKTGASTMIVLNSAD 104
+ +K P P+ G L NL L KP + A+ G I+ + L+S
Sbjct: 1 MTIKEMPQPKTFGEL---KNLPLLNTDKPVQALMKIADELGEIFKFEAPGRVTRYLSSQR 57
Query: 105 VAKEAMVTRYPSISTRKLSNALKMLTSNKCMVATSDYDEFHKMAKRCLLTN-VLGGNAQK 163
+ KEA S + LS ALK + A L T+ N +K
Sbjct: 58 LIKEACDE---SRFDKNLSQALKFVRD---------------FAGDGLFTSWTHEKNWKK 99
Query: 164 RHRIHRDTMMENMSTQFHAHIMDNPLQLVNFRKIFESELFAVSMKQAVGKVVESIYVKEL 223
H I + + +HA ++D +QLV + ++ E I V E
Sbjct: 100 AHNILLPSFSQQAMKGYHAMMVDIAVQLVQKWERLNAD--------------EHIEVPED 145
Query: 224 GSTLSKDEVFKILVLDIMEGAIEVDWRDFFPYLRWVPNKGVEM----------KIQRLC- 272
+ L+ D + G ++R F + R P+ + K+QR
Sbjct: 146 MTRLTLDTI----------GLCGFNYR-FNSFYRDQPHPFITSMVRALDEAMNKLQRANP 194
Query: 273 -------TRRQ-----AVMDVLISEA-KSRIASGQELNCYVDHLLS-----EVKSLTEQQ 314
+RQ VM+ L+ + R ASG++ + + H+L+ + L ++
Sbjct: 195 DDPAYDENKRQFQEDIKVMNDLVDKIIADRKASGEQSDDLLTHMLNGKDPETGEPLDDEN 254
Query: 315 ISMLLWEPIIETSDTTLVTTEWAMYELAKDPMRQDRLFQKIQSVCRSNKFTEENIAQVPY 374
I + + + T +A+Y L K+P + ++ V + + + Q+ Y
Sbjct: 255 IRYQIITFLAAGHEATSGLLSFALYFLVKNPHVLQKAAEEAARVLVDPVPSYKQVKQLKY 314
Query: 375 LGAVFHETLRKYSPAPIVPLRFAHEDTEIGG-YFIPAGSEIAINIYGCNMDKKQW-ENPD 432
+G V +E LR + P L +A EDT +GG Y + G E+ + I + DK W ++ +
Sbjct: 315 VGMVLNEALRLWPTGPAFSL-YAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVE 373
Query: 433 EWKPERFLDGQYDPADLYKTMAFGTGKRVCAGSLQASLIACTAIGRLVQEFKW 485
E++PERF + P +K FG G+R C G A A +G +++ F +
Sbjct: 374 EFRPERFENPSAIPQHAFK--PFGNGQRACIGQQFALHEATLVLGMMLKHFDF 424
>pdb|4DUA|A Chain A, Cytochrome P450 Bm3h-9d7 Mri Sensor, No Ligand
pdb|4DUA|B Chain B, Cytochrome P450 Bm3h-9d7 Mri Sensor, No Ligand
Length = 471
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 104/216 (48%), Gaps = 11/216 (5%)
Query: 278 VMDVLISEA-KSRIASGQELNCYVDHLLS-----EVKSLTEQQISMLLWEPIIETSDTTL 331
VM+ L+ + R ASG++ + + H+L+ + L ++ I + + + T
Sbjct: 211 VMNDLVDKIIADRKASGEQSDDLLTHMLNGKDPETGEPLDDENIRYQIITFLAAGHEATS 270
Query: 332 VTTEWAMYELAKDPMRQDRLFQKIQSVCRSNKFTEENIAQVPYLGAVFHETLRKYSPAPI 391
+A+Y L K+P + ++ V + + + Q+ Y+G V +E LR + P
Sbjct: 271 GLLSFALYFLVKNPHVLQKAAEEAARVLVDPVPSYKQVKQLKYVGMVLNEALRLWPTGPA 330
Query: 392 VPLRFAHEDTEIGG-YFIPAGSEIAINIYGCNMDKKQW-ENPDEWKPERFLDGQYDPADL 449
L +A EDT +GG Y + G E+ + I + DK W ++ +E++PERF + P
Sbjct: 331 FSL-YAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQHA 389
Query: 450 YKTMAFGTGKRVCAGSLQASLIACTAIGRLVQEFKW 485
+K FG G+R C G A A +G +++ F +
Sbjct: 390 FK--PFGNGQRACIGQQFALHEATLVLGMMLKHFDF 423
>pdb|1DT6|A Chain A, Structure Of Mammalian Cytochrome P450 2c5
pdb|1N6B|A Chain A, Microsomal Cytochrome P450 2c5/3lvdh Complex With A
Dimethyl Derivative Of Sulfaphenazole
pdb|1NR6|A Chain A, Microsomal Cytochrome P450 2c53LVDH COMPLEX WITH
DICLOFENAC
Length = 473
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 89/199 (44%), Gaps = 20/199 (10%)
Query: 299 YVDHLLSEVKSLTEQQISMLLWEPIIETSD-------TTLVTTEWAMYELAKDPMRQDRL 351
++D L +K E + L +I SD TT T +++ L K P R+
Sbjct: 245 FIDCFL--IKMEQENNLEFTLESLVIAVSDLFGAGTETTSTTLRYSLLLLLKHPEVAARV 302
Query: 352 FQKIQSVC-RSNKFTEENIAQVPYLGAVFHETLRKYSPAPIVPLRFAH---EDTEIGGYF 407
++I+ V R ++ +++PY AV HE R ++P H D YF
Sbjct: 303 QEEIERVIGRHRSPCMQDRSRMPYTDAVIHEIQRFID---LLPTNLPHAVTRDVRFRNYF 359
Query: 408 IPAGSEIAINIYGCNMDKKQWENPDEWKPERFLD--GQYDPADLYKTMAFGTGKRVCAGS 465
IP G++I ++ D+K + NP + P FLD G + +D + M F GKR+C G
Sbjct: 360 IPKGTDIITSLTSVLHDEKAFPNPKVFDPGHFLDESGNFKKSDYF--MPFSAGKRMCVGE 417
Query: 466 LQASLIACTAIGRLVQEFK 484
A + + ++Q FK
Sbjct: 418 GLARMELFLFLTSILQNFK 436
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 48/92 (52%), Gaps = 10/92 (10%)
Query: 48 KLPPVPEVPGRLPLIGNLLQLKEKKPHMTFTRWAEVYGPIYSIKTGASTMIVLNSADVAK 107
KLPP P P+IGN+LQ+ K + T+++E YGP++++ G +VL+ + K
Sbjct: 10 KLPPGPT---PFPIIGNILQIDAKDISKSLTKFSECYGPVFTVYLGMKPTVVLHGYEAVK 66
Query: 108 EAMVTRYPSISTR-------KLSNALKMLTSN 132
EA+V + R K+S L + SN
Sbjct: 67 EALVDLGEEFAGRGSVPILEKVSKGLGIAFSN 98
>pdb|2PG5|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 N297q
pdb|2PG5|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 N297q
pdb|2PG5|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 N297q
pdb|2PG5|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 N297q
Length = 476
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 45/175 (25%), Positives = 83/175 (47%), Gaps = 5/175 (2%)
Query: 313 QQISMLLWEPIIETSDTTLVTTEWAMYELAKDPMRQDRLFQKIQSVCRSNKFTE-ENIAQ 371
+ + M + I ++T T + L K P + ++ ++I V N+ + E+ A+
Sbjct: 267 KNLVMTTLQLFIGGTETVSTTLRYGFLLLMKHPEVEAKVHEEIDRVIGKNRQPKFEDRAK 326
Query: 372 VPYLGAVFHETLRKYSPAPIVPLRFAHEDTEIGGYFIPAGSEIAINIYGCNMDKKQWENP 431
+PY+ AV HE R P+ R +DT+ +F+P G+E+ + D + NP
Sbjct: 327 MPYMEAVIHEIQRFGDVIPMSLARRVKKDTKFRDFFLPKGTEVYPMLGSVLRDPSFFSNP 386
Query: 432 DEWKPERFLD--GQYDPADLYKTMAFGTGKRVCAGSLQASLIACTAIGRLVQEFK 484
++ P+ FL+ GQ+ +D + + F GKR C G A + ++Q F+
Sbjct: 387 QDFNPQHFLNEKGQFKKSDAF--VPFSIGKRNCFGEGLARMELFLFFTTVMQNFR 439
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 42/73 (57%), Gaps = 3/73 (4%)
Query: 48 KLPPVPEVPGRLPLIGNLLQLKEKKPHMTFTRWAEVYGPIYSIKTGASTMIVLNSADVAK 107
KLPP P P LP IGN LQL ++ + + + +E YGP+++I G ++VL D +
Sbjct: 10 KLPPGP-TP--LPFIGNYLQLNTEQMYNSLMKISERYGPVFTIHLGPRRVVVLCGHDAVR 66
Query: 108 EAMVTRYPSISTR 120
EA+V + S R
Sbjct: 67 EALVDQAEEFSGR 79
>pdb|2PG6|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 L240cN297Q
pdb|2PG6|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 L240cN297Q
pdb|2PG6|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 L240cN297Q
pdb|2PG6|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 L240cN297Q
Length = 476
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 45/175 (25%), Positives = 83/175 (47%), Gaps = 5/175 (2%)
Query: 313 QQISMLLWEPIIETSDTTLVTTEWAMYELAKDPMRQDRLFQKIQSVCRSNKFTE-ENIAQ 371
+ + M + I ++T T + L K P + ++ ++I V N+ + E+ A+
Sbjct: 267 KNLVMTTLQLFIGGTETVSTTLRYGFLLLMKHPEVEAKVHEEIDRVIGKNRQPKFEDRAK 326
Query: 372 VPYLGAVFHETLRKYSPAPIVPLRFAHEDTEIGGYFIPAGSEIAINIYGCNMDKKQWENP 431
+PY+ AV HE R P+ R +DT+ +F+P G+E+ + D + NP
Sbjct: 327 MPYMEAVIHEIQRFGDVIPMSLARRVKKDTKFRDFFLPKGTEVYPMLGSVLRDPSFFSNP 386
Query: 432 DEWKPERFLD--GQYDPADLYKTMAFGTGKRVCAGSLQASLIACTAIGRLVQEFK 484
++ P+ FL+ GQ+ +D + + F GKR C G A + ++Q F+
Sbjct: 387 QDFNPQHFLNEKGQFKKSDAF--VPFSIGKRNCFGEGLARMELFLFFTTVMQNFR 439
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 42/73 (57%), Gaps = 3/73 (4%)
Query: 48 KLPPVPEVPGRLPLIGNLLQLKEKKPHMTFTRWAEVYGPIYSIKTGASTMIVLNSADVAK 107
KLPP P P LP IGN LQL ++ + + + +E YGP+++I G ++VL D +
Sbjct: 10 KLPPGP-TP--LPFIGNYLQLNTEQMYNSLMKISERYGPVFTIHLGPRRVVVLCGHDAVR 66
Query: 108 EAMVTRYPSISTR 120
EA+V + S R
Sbjct: 67 EALVDQAEEFSGR 79
>pdb|1Z10|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 With
Coumarin Bound
pdb|1Z10|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 With
Coumarin Bound
pdb|1Z10|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 With
Coumarin Bound
pdb|1Z10|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 With
Coumarin Bound
pdb|1Z11|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 With
Methoxsalen Bound
pdb|1Z11|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 With
Methoxsalen Bound
pdb|1Z11|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 With
Methoxsalen Bound
pdb|1Z11|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 With
Methoxsalen Bound
pdb|2FDU|A Chain A, Microsomal P450 2a6 With The Inhibitor N,N-Dimethyl(5-
(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDU|B Chain B, Microsomal P450 2a6 With The Inhibitor N,N-Dimethyl(5-
(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDU|C Chain C, Microsomal P450 2a6 With The Inhibitor N,N-Dimethyl(5-
(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDU|D Chain D, Microsomal P450 2a6 With The Inhibitor N,N-Dimethyl(5-
(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDV|A Chain A, Microsomal P450 2a6 With The Inhibitor
N-Methyl(5-(Pyridin- 3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDV|B Chain B, Microsomal P450 2a6 With The Inhibitor
N-Methyl(5-(Pyridin- 3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDV|C Chain C, Microsomal P450 2a6 With The Inhibitor
N-Methyl(5-(Pyridin- 3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDV|D Chain D, Microsomal P450 2a6 With The Inhibitor
N-Methyl(5-(Pyridin- 3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDW|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 With The
Inhibitor (5-(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDW|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 With The
Inhibitor (5-(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDW|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 With The
Inhibitor (5-(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDW|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 With The
Inhibitor (5-(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDY|A Chain A, Microsomal P450 2a6 With The Inhibitor Adrithiol Bound
pdb|2FDY|B Chain B, Microsomal P450 2a6 With The Inhibitor Adrithiol Bound
pdb|2FDY|C Chain C, Microsomal P450 2a6 With The Inhibitor Adrithiol Bound
pdb|2FDY|D Chain D, Microsomal P450 2a6 With The Inhibitor Adrithiol Bound
pdb|3T3R|A Chain A, Human Cytochrome P450 2a6 In Complex With Pilocarpine
pdb|3T3R|B Chain B, Human Cytochrome P450 2a6 In Complex With Pilocarpine
pdb|3T3R|C Chain C, Human Cytochrome P450 2a6 In Complex With Pilocarpine
pdb|3T3R|D Chain D, Human Cytochrome P450 2a6 In Complex With Pilocarpine
pdb|4EJJ|A Chain A, Human Cytochrome P450 2a6 In Complex With Nicotine
pdb|4EJJ|B Chain B, Human Cytochrome P450 2a6 In Complex With Nicotine
pdb|4EJJ|C Chain C, Human Cytochrome P450 2a6 In Complex With Nicotine
pdb|4EJJ|D Chain D, Human Cytochrome P450 2a6 In Complex With Nicotine
Length = 476
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 79/165 (47%), Gaps = 5/165 (3%)
Query: 323 IIETSDTTLVTTEWAMYELAKDPMRQDRLFQKIQSVCRSNKFTE-ENIAQVPYLGAVFHE 381
I ++T T + L K P + ++ ++I V N+ + E+ A++PY+ AV HE
Sbjct: 277 FIGGTETVSTTLRYGFLLLMKHPEVEAKVHEEIDRVIGKNRQPKFEDRAKMPYMEAVIHE 336
Query: 382 TLRKYSPAPIVPLRFAHEDTEIGGYFIPAGSEIAINIYGCNMDKKQWENPDEWKPERFLD 441
R P+ R +DT+ +F+P G+E+ + D + NP ++ P+ FL+
Sbjct: 337 IQRFGDVIPMSLARRVKKDTKFRDFFLPKGTEVYPMLGSVLRDPSFFSNPQDFNPQHFLN 396
Query: 442 --GQYDPADLYKTMAFGTGKRVCAGSLQASLIACTAIGRLVQEFK 484
GQ+ +D + + F GKR C G A + ++Q F+
Sbjct: 397 EKGQFKKSDAF--VPFSIGKRNCFGEGLARMELFLFFTTVMQNFR 439
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 42/73 (57%), Gaps = 3/73 (4%)
Query: 48 KLPPVPEVPGRLPLIGNLLQLKEKKPHMTFTRWAEVYGPIYSIKTGASTMIVLNSADVAK 107
KLPP P P LP IGN LQL ++ + + + +E YGP+++I G ++VL D +
Sbjct: 10 KLPPGP-TP--LPFIGNYLQLNTEQMYNSLMKISERYGPVFTIHLGPRRVVVLCGHDAVR 66
Query: 108 EAMVTRYPSISTR 120
EA+V + S R
Sbjct: 67 EALVDQAEEFSGR 79
>pdb|2PG7|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 N297qI300V
pdb|2PG7|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 N297qI300V
pdb|2PG7|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 N297qI300V
pdb|2PG7|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 N297qI300V
Length = 476
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 44/175 (25%), Positives = 83/175 (47%), Gaps = 5/175 (2%)
Query: 313 QQISMLLWEPIIETSDTTLVTTEWAMYELAKDPMRQDRLFQKIQSVCRSNKFTE-ENIAQ 371
+ + M + + ++T T + L K P + ++ ++I V N+ + E+ A+
Sbjct: 267 KNLVMTTLQLFVGGTETVSTTLRYGFLLLMKHPEVEAKVHEEIDRVIGKNRQPKFEDRAK 326
Query: 372 VPYLGAVFHETLRKYSPAPIVPLRFAHEDTEIGGYFIPAGSEIAINIYGCNMDKKQWENP 431
+PY+ AV HE R P+ R +DT+ +F+P G+E+ + D + NP
Sbjct: 327 MPYMEAVIHEIQRFGDVIPMSLARRVKKDTKFRDFFLPKGTEVYPMLGSVLRDPSFFSNP 386
Query: 432 DEWKPERFLD--GQYDPADLYKTMAFGTGKRVCAGSLQASLIACTAIGRLVQEFK 484
++ P+ FL+ GQ+ +D + + F GKR C G A + ++Q F+
Sbjct: 387 QDFNPQHFLNEKGQFKKSDAF--VPFSIGKRNCFGEGLARMELFLFFTTVMQNFR 439
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 42/73 (57%), Gaps = 3/73 (4%)
Query: 48 KLPPVPEVPGRLPLIGNLLQLKEKKPHMTFTRWAEVYGPIYSIKTGASTMIVLNSADVAK 107
KLPP P P LP IGN LQL ++ + + + +E YGP+++I G ++VL D +
Sbjct: 10 KLPPGP-TP--LPFIGNYLQLNTEQMYNSLMKISERYGPVFTIHLGPRRVVVLCGHDAVR 66
Query: 108 EAMVTRYPSISTR 120
EA+V + S R
Sbjct: 67 EALVDQAEEFSGR 79
>pdb|3EBS|A Chain A, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
With Phenacetin
pdb|3EBS|B Chain B, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
With Phenacetin
pdb|3EBS|C Chain C, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
With Phenacetin
pdb|3EBS|D Chain D, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
With Phenacetin
pdb|3T3Q|A Chain A, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
WITH Pilocarpine
pdb|3T3Q|B Chain B, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
WITH Pilocarpine
pdb|3T3Q|C Chain C, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
WITH Pilocarpine
pdb|3T3Q|D Chain D, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
WITH Pilocarpine
Length = 476
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 78/161 (48%), Gaps = 5/161 (3%)
Query: 327 SDTTLVTTEWAMYELAKDPMRQDRLFQKIQSVCRSNKFTE-ENIAQVPYLGAVFHETLRK 385
++T T + L K P + ++ ++I V N+ + E+ A++PY+ AV HE R
Sbjct: 281 TETVSTTLRYGFLLLMKHPEVEAKVHEEIDRVIGKNRQPKFEDRAKMPYMEAVIHEIQRF 340
Query: 386 YSPAPIVPLRFAHEDTEIGGYFIPAGSEIAINIYGCNMDKKQWENPDEWKPERFLD--GQ 443
P+ R +DT+ +F+P G+E+ + D + NP ++ P+ FL+ GQ
Sbjct: 341 GDVIPMGLARRVKKDTKFRDFFLPKGTEVYPMLGSVLRDPSFFSNPQDFNPQHFLNEKGQ 400
Query: 444 YDPADLYKTMAFGTGKRVCAGSLQASLIACTAIGRLVQEFK 484
+ +D + + F GKR C G A + ++Q F+
Sbjct: 401 FKKSDAF--VPFSIGKRNCFGEGLARMELFLFFTTVMQNFR 439
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 42/73 (57%), Gaps = 3/73 (4%)
Query: 48 KLPPVPEVPGRLPLIGNLLQLKEKKPHMTFTRWAEVYGPIYSIKTGASTMIVLNSADVAK 107
KLPP P P LP IGN LQL ++ + + + +E YGP+++I G ++VL D +
Sbjct: 10 KLPPGP-TP--LPFIGNYLQLNTEQMYNSLMKISERYGPVFTIHLGPRRVVVLCGHDAVR 66
Query: 108 EAMVTRYPSISTR 120
EA+V + S R
Sbjct: 67 EALVDQAEEFSGR 79
>pdb|1OG2|A Chain A, Structure Of Human Cytochrome P450 Cyp2c9
pdb|1OG2|B Chain B, Structure Of Human Cytochrome P450 Cyp2c9
pdb|1OG5|A Chain A, Structure Of Human Cytochrome P450 Cyp2c9
pdb|1OG5|B Chain B, Structure Of Human Cytochrome P450 Cyp2c9
Length = 475
Score = 65.1 bits (157), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 89/199 (44%), Gaps = 19/199 (9%)
Query: 299 YVDHLLSEVKSLTEQQISMLLWEPIIET--------SDTTLVTTEWAMYELAKDPMRQDR 350
++D L +++ Q S E + T ++TT T +A+ L K P +
Sbjct: 244 FIDCFLMKMEKEKHNQPSEFTIESLENTAVDLFGAGTETTSTTLRYALLLLLKHPEVTAK 303
Query: 351 LFQKIQSVCRSNKF-TEENIAQVPYLGAVFHETLRKYSPAPIVPLRFAHE---DTEIGGY 406
+ ++I+ V N+ ++ + +PY AV HE R ++P H D + Y
Sbjct: 304 VQEEIERVIGRNRSPCMQDRSHMPYTDAVVHEVQRYID---LLPTSLPHAVTCDIKFRNY 360
Query: 407 FIPAGSEIAINIYGCNMDKKQWENPDEWKPERFLD--GQYDPADLYKTMAFGTGKRVCAG 464
IP G+ I I++ D K++ NP+ + P FLD G + + + M F GKR+C G
Sbjct: 361 LIPKGTTILISLTSVLHDNKEFPNPEMFDPHHFLDEGGNFKKSKYF--MPFSAGKRICVG 418
Query: 465 SLQASLIACTAIGRLVQEF 483
A + + ++Q F
Sbjct: 419 EALAGMELFLFLTSILQNF 437
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 40/70 (57%)
Query: 53 PEVPGRLPLIGNLLQLKEKKPHMTFTRWAEVYGPIYSIKTGASTMIVLNSADVAKEAMVT 112
P P LP+IGN+LQ+ K + T ++VYGP++++ G ++VL+ + KEA++
Sbjct: 11 PPGPTPLPVIGNILQIGIKDISKSLTNLSKVYGPVFTLYFGLKPIVVLHGYEAVKEALID 70
Query: 113 RYPSISTRKL 122
S R +
Sbjct: 71 LGEEFSGRGI 80
>pdb|1R9O|A Chain A, Crystal Structure Of P4502c9 With Flurbiprofen Bound
Length = 477
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 89/199 (44%), Gaps = 19/199 (9%)
Query: 299 YVDHLLSEVKSLTEQQISMLLWEPIIET--------SDTTLVTTEWAMYELAKDPMRQDR 350
++D L +++ Q S E + T ++TT T +A+ L K P +
Sbjct: 246 FIDCFLMKMEKEKHNQPSEFTIESLENTAVDLFGAGTETTSTTLRYALLLLLKHPEVTAK 305
Query: 351 LFQKIQSVCRSNKF-TEENIAQVPYLGAVFHETLRKYSPAPIVPLRFAHE---DTEIGGY 406
+ ++I+ V N+ ++ + +PY AV HE R ++P H D + Y
Sbjct: 306 VQEEIERVIGRNRSPCMQDRSHMPYTDAVVHEVQRYID---LLPTSLPHAVTCDIKFRNY 362
Query: 407 FIPAGSEIAINIYGCNMDKKQWENPDEWKPERFLD--GQYDPADLYKTMAFGTGKRVCAG 464
IP G+ I I++ D K++ NP+ + P FLD G + + + M F GKR+C G
Sbjct: 363 LIPKGTTILISLTSVLHDNKEFPNPEMFDPHHFLDEGGNFKKSKYF--MPFSAGKRICVG 420
Query: 465 SLQASLIACTAIGRLVQEF 483
A + + ++Q F
Sbjct: 421 EALAGMELFLFLTSILQNF 439
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 43/75 (57%), Gaps = 3/75 (4%)
Query: 48 KLPPVPEVPGRLPLIGNLLQLKEKKPHMTFTRWAEVYGPIYSIKTGASTMIVLNSADVAK 107
KLPP P LP+IGN+LQ+ K + T ++VYGP++++ G ++VL+ + K
Sbjct: 11 KLPPGPT---PLPVIGNILQIGIKDISKSLTNLSKVYGPVFTLYFGLKPIVVLHGYEAVK 67
Query: 108 EAMVTRYPSISTRKL 122
EA++ S R +
Sbjct: 68 EALIDLGEEFSGRGI 82
>pdb|2VE3|A Chain A, Retinoic Acid Bound Cyanobacterial Cyp120a1
pdb|2VE3|B Chain B, Retinoic Acid Bound Cyanobacterial Cyp120a1
pdb|2VE4|A Chain A, Substrate Free Cyanobacterial Cyp120a1
pdb|2VE4|B Chain B, Substrate Free Cyanobacterial Cyp120a1
Length = 444
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 42/145 (28%), Positives = 67/145 (46%), Gaps = 2/145 (1%)
Query: 348 QDRLFQKIQSVCRSNKFTEENIAQVPYLGAVFHETLRKYSPAPIVPLRFAHEDTEIGGYF 407
++R+ Q+ + S + T E + ++PYL V E LR P R +D + G+
Sbjct: 277 RERVRQEQNKLQLSQELTAETLKKMPYLDQVLQEVLRLIPPVG-GGFRELIQDCQFQGFH 335
Query: 408 IPAGSEIAINIYGCNMDKKQWENPDEWKPERFL-DGQYDPADLYKTMAFGTGKRVCAGSL 466
P G ++ I + D + +P+++ PERF DG + + FG G R C G
Sbjct: 336 FPKGWLVSYQISQTHADPDLYPDPEKFDPERFTPDGSATHNPPFAHVPFGGGLRECLGKE 395
Query: 467 QASLIACTAIGRLVQEFKWNLREGE 491
A L RL+Q+F W L G+
Sbjct: 396 FARLEMKLFATRLIQQFDWTLLPGQ 420
>pdb|4GQS|A Chain A, Structure Of Human Microsomal Cytochrome P450 (cyp) 2c19
pdb|4GQS|B Chain B, Structure Of Human Microsomal Cytochrome P450 (cyp) 2c19
pdb|4GQS|C Chain C, Structure Of Human Microsomal Cytochrome P450 (cyp) 2c19
pdb|4GQS|D Chain D, Structure Of Human Microsomal Cytochrome P450 (cyp) 2c19
Length = 477
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 90/199 (45%), Gaps = 19/199 (9%)
Query: 299 YVDHLLSEVKSLTEQQISMLLWEPIIET--------SDTTLVTTEWAMYELAKDPMRQDR 350
++D L +++ + Q S E ++ T ++TT T +A+ L K P +
Sbjct: 246 FIDCFLIKMEKEKQNQQSEFTIENLVITAADLLGAGTETTSTTLRYALLLLLKHPEVTAK 305
Query: 351 LFQKIQSVCRSNKF-TEENIAQVPYLGAVFHETLRKYSPAPIVPLRFAHE---DTEIGGY 406
+ ++I+ V N+ ++ +PY AV HE R ++P H D + Y
Sbjct: 306 VQEEIERVVGRNRSPCMQDRGHMPYTDAVVHEVQRYID---LIPTSLPHAVTCDVKFRNY 362
Query: 407 FIPAGSEIAINIYGCNMDKKQWENPDEWKPERFLD--GQYDPADLYKTMAFGTGKRVCAG 464
IP G+ I ++ D K++ NP+ + P FLD G + ++ + M F GKR+C G
Sbjct: 363 LIPKGTTILTSLTSVLHDNKEFPNPEMFDPRHFLDEGGNFKKSNYF--MPFSAGKRICVG 420
Query: 465 SLQASLIACTAIGRLVQEF 483
A + + ++Q F
Sbjct: 421 EGLARMELFLFLTFILQNF 439
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 43/73 (58%), Gaps = 3/73 (4%)
Query: 48 KLPPVPEVPGRLPLIGNLLQLKEKKPHMTFTRWAEVYGPIYSIKTGASTMIVLNSADVAK 107
KLPP P LP+IGN+LQ+ K + T +++YGP++++ G M+VL+ +V K
Sbjct: 11 KLPPGPT---PLPVIGNILQIDIKDVSKSLTNLSKIYGPVFTLYFGLERMVVLHGYEVVK 67
Query: 108 EAMVTRYPSISTR 120
EA++ S R
Sbjct: 68 EALIDLGEEFSGR 80
>pdb|3TK3|A Chain A, Cytochrome P450 2b4 Mutant L437a In Complex With
4-(4-Chlorophenyl) Imidazole
pdb|3TK3|B Chain B, Cytochrome P450 2b4 Mutant L437a In Complex With
4-(4-Chlorophenyl) Imidazole
pdb|3TK3|C Chain C, Cytochrome P450 2b4 Mutant L437a In Complex With
4-(4-Chlorophenyl) Imidazole
pdb|3TK3|D Chain D, Cytochrome P450 2b4 Mutant L437a In Complex With
4-(4-Chlorophenyl) Imidazole
Length = 476
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 72/157 (45%), Gaps = 7/157 (4%)
Query: 312 EQQISMLLWEPIIETSDTTLVTTEWAMYELAKDPMRQDRLFQKIQSVCRSNKFTE-ENIA 370
Q + + + ++TT T + + K P +R+ ++I+ V S++ ++ A
Sbjct: 266 HQNLILTVLSLFFAGTETTSTTLRYGFLLMLKYPHVTERVQKEIEQVIGSHRPPALDDRA 325
Query: 371 QVPYLGAVFHETLRKYSPAPIVPLRFAH---EDTEIGGYFIPAGSEIAINIYGCNMDKKQ 427
++PY AV HE R ++P H +DT+ GY IP +E+ + D +
Sbjct: 326 KMPYTDAVIHEIQRL---GDLIPFGVPHTVTKDTQFRGYVIPKNTEVFPVLSSALHDPRY 382
Query: 428 WENPDEWKPERFLDGQYDPADLYKTMAFGTGKRVCAG 464
+E P+ + P FLD M F GKR+CAG
Sbjct: 383 FETPNTFNPGHFLDANGALKRNEGFMPFSLGKRICAG 419
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 42/73 (57%), Gaps = 3/73 (4%)
Query: 48 KLPPVPEVPGRLPLIGNLLQLKEKKPHMTFTRWAEVYGPIYSIKTGASTMIVLNSADVAK 107
KLPP P LP++GNLLQ+ K +F R E YG ++++ G+ ++VL D +
Sbjct: 10 KLPPGPSP---LPVLGNLLQMDRKGLLRSFLRLREKYGDVFTVYLGSRPVVVLCGTDAIR 66
Query: 108 EAMVTRYPSISTR 120
EA+V + + S R
Sbjct: 67 EALVDQAEAFSGR 79
>pdb|3IBD|A Chain A, Crystal Structure Of A Cytochrome P450 2b6 Genetic Variant
In Complex With The Inhibitor
4-(4-Chlorophenyl)imidazole
pdb|3QOA|A Chain A, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-Benzylpyridine.
pdb|3QU8|A Chain A, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3QU8|B Chain B, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3QU8|C Chain C, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3QU8|D Chain D, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3QU8|E Chain E, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3QU8|F Chain F, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3UA5|A Chain A, Crystal Structure Of P450 2b6 (Y226hK262R) IN COMPLEX WITH
TWO Molecules Of Amlodipine
pdb|3UA5|B Chain B, Crystal Structure Of P450 2b6 (Y226hK262R) IN COMPLEX WITH
TWO Molecules Of Amlodipine
Length = 476
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 45/177 (25%), Positives = 80/177 (45%), Gaps = 11/177 (6%)
Query: 296 LNCYVDHLLSEVKS----LTEQQISMLLWEPIIETSDTTLVTTEWAMYELAKDPMRQDRL 351
++ Y+ H+ E + + Q +++ ++TT T + + K P +R+
Sbjct: 246 IDTYLLHMEKEKSNAHSEFSHQNLNLNTLSLFFAGTETTSTTLRYGFLLMLKYPHVAERV 305
Query: 352 FQKIQSVCRSNKFTE-ENIAQVPYLGAVFHETLRKYSPAPIVPLRFAHEDTEIGGYFIPA 410
+++I+ V ++ E + A++PY AV +E R P+ + T GY IP
Sbjct: 306 YREIEQVIGPHRPPELHDRAKMPYTEAVIYEIQRFSDLLPMGVPHIVTQHTSFRGYIIPK 365
Query: 411 GSEIAINIYGCNMDKKQWENPDEWKPERFLDGQYDPADLYKTMA---FGTGKRVCAG 464
+E+ + + D +E PD + P+ FLD L KT A F GKR+C G
Sbjct: 366 DTEVFLILSTALHDPHYFEKPDAFNPDHFLDAN---GALKKTEAFIPFSLGKRICLG 419
Score = 37.4 bits (85), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 16/57 (28%), Positives = 32/57 (56%)
Query: 64 NLLQLKEKKPHMTFTRWAEVYGPIYSIKTGASTMIVLNSADVAKEAMVTRYPSISTR 120
NLLQ+ + +F R+ E YG ++++ G +++L + +EA+V + + S R
Sbjct: 23 NLLQMDRRGLLKSFLRFREKYGDVFTVHLGPRPVVMLCGVEAIREALVDKAEAFSGR 79
>pdb|3NA0|A Chain A, Crystal Structure Of Human Cyp11a1 In Complex With 20,22-
Dihydroxycholesterol
pdb|3NA0|B Chain B, Crystal Structure Of Human Cyp11a1 In Complex With 20,22-
Dihydroxycholesterol
Length = 471
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 42/158 (26%), Positives = 75/158 (47%), Gaps = 3/158 (1%)
Query: 328 DTTLVTTEWAMYELAKDPMRQDRLFQKIQSVCRSNKFTEENIAQ-VPYLGAVFHETLRKY 386
DTT +T +W +YE+A++ QD L ++ + + + Q VP L A ETLR +
Sbjct: 286 DTTSMTLQWHLYEMARNLKVQDMLRAEVLAARHQAQGDMATMLQLVPLLKASIKETLRLH 345
Query: 387 SPAPIVPLRFAHEDTEIGGYFIPAGSEIAINIYGCNMDKKQWENPDEWKPERFLDGQYDP 446
P + R+ D + Y IPA + + + IY + + +P+ + P R+L +
Sbjct: 346 -PISVTLQRYLVNDLVLRDYMIPAKTLVQVAIYALGREPTFFFDPENFDPTRWLSKDKN- 403
Query: 447 ADLYKTMAFGTGKRVCAGSLQASLIACTAIGRLVQEFK 484
++ + FG G R C G A L + +++ F+
Sbjct: 404 ITYFRNLGFGWGVRQCLGRRIAELEMTIFLINMLENFR 441
>pdb|3N9Y|A Chain A, Crystal Structure Of Human Cyp11a1 In Complex With
Cholesterol
pdb|3N9Y|B Chain B, Crystal Structure Of Human Cyp11a1 In Complex With
Cholesterol
pdb|3N9Z|A Chain A, Crystal Structure Of Human Cyp11a1 In Complex With 22-
Hydroxycholesterol
pdb|3N9Z|B Chain B, Crystal Structure Of Human Cyp11a1 In Complex With 22-
Hydroxycholesterol
pdb|3NA1|A Chain A, Crystal Structure Of Human Cyp11a1 In Complex With 20-
Hydroxycholesterol
pdb|3NA1|B Chain B, Crystal Structure Of Human Cyp11a1 In Complex With 20-
Hydroxycholesterol
Length = 487
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/158 (26%), Positives = 75/158 (47%), Gaps = 3/158 (1%)
Query: 328 DTTLVTTEWAMYELAKDPMRQDRLFQKIQSVCRSNKFTEENIAQ-VPYLGAVFHETLRKY 386
DTT +T +W +YE+A++ QD L ++ + + + Q VP L A ETLR +
Sbjct: 289 DTTSMTLQWHLYEMARNLKVQDMLRAEVLAARHQAQGDMATMLQLVPLLKASIKETLRLH 348
Query: 387 SPAPIVPLRFAHEDTEIGGYFIPAGSEIAINIYGCNMDKKQWENPDEWKPERFLDGQYDP 446
P + R+ D + Y IPA + + + IY + + +P+ + P R+L +
Sbjct: 349 -PISVTLQRYLVNDLVLRDYMIPAKTLVQVAIYALGREPTFFFDPENFDPTRWLSKDKN- 406
Query: 447 ADLYKTMAFGTGKRVCAGSLQASLIACTAIGRLVQEFK 484
++ + FG G R C G A L + +++ F+
Sbjct: 407 ITYFRNLGFGWGVRQCLGRRIAELEMTIFLINMLENFR 444
>pdb|1PO5|A Chain A, Structure Of Mammalian Cytochrome P450 2b4
Length = 476
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 71/157 (45%), Gaps = 7/157 (4%)
Query: 312 EQQISMLLWEPIIETSDTTLVTTEWAMYELAKDPMRQDRLFQKIQSVCRSNKFTE-ENIA 370
Q + + + ++TT T + + K P +R+ ++I+ V S++ ++ A
Sbjct: 266 HQNLILTVLSLFFAGTETTSTTLRYGFLLMLKYPHVTERVQKEIEQVIGSHRPPALDDRA 325
Query: 371 QVPYLGAVFHETLRKYSPAPIVPLRFAH---EDTEIGGYFIPAGSEIAINIYGCNMDKKQ 427
++PY AV HE R ++P H +DT+ GY IP +E+ + D +
Sbjct: 326 KMPYTDAVIHEIQRL---GDLIPFGVPHTVTKDTQFRGYVIPKNTEVFPVLSSALHDPRY 382
Query: 428 WENPDEWKPERFLDGQYDPADLYKTMAFGTGKRVCAG 464
+E P+ + P FLD M F GKR+C G
Sbjct: 383 FETPNTFNPGHFLDANGALKRNEGFMPFSLGKRICLG 419
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 42/73 (57%), Gaps = 3/73 (4%)
Query: 48 KLPPVPEVPGRLPLIGNLLQLKEKKPHMTFTRWAEVYGPIYSIKTGASTMIVLNSADVAK 107
KLPP P LP++GNLLQ+ K +F R E YG ++++ G+ ++VL D +
Sbjct: 10 KLPPGPSP---LPVLGNLLQMDRKGLLRSFLRLREKYGDVFTVYLGSRPVVVLCGTDAIR 66
Query: 108 EAMVTRYPSISTR 120
EA+V + + S R
Sbjct: 67 EALVDQAEAFSGR 79
>pdb|1SUO|A Chain A, Structure Of Mammalian Cytochrome P450 2b4 With Bound
4-(4- Chlorophenyl)imidazole
pdb|2BDM|A Chain A, Structure Of Cytochrome P450 2b4 With Bound Bifonazole
pdb|3G5N|A Chain A, Triple Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G5N|B Chain B, Triple Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G5N|C Chain C, Triple Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G5N|D Chain D, Triple Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G93|A Chain A, Single Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G93|B Chain B, Single Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G93|C Chain C, Single Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G93|D Chain D, Single Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3KW4|A Chain A, Crystal Structure Of Cytochrome 2b4 In Complex With The
Anti-Platelet Drug Ticlopidine
pdb|3ME6|A Chain A, Crystal Structure Of Cytochrome 2b4 In Complex With The
Anti-Platelet Drug Clopidogrel
pdb|3ME6|B Chain B, Crystal Structure Of Cytochrome 2b4 In Complex With The
Anti-Platelet Drug Clopidogrel
pdb|3ME6|C Chain C, Crystal Structure Of Cytochrome 2b4 In Complex With The
Anti-Platelet Drug Clopidogrel
pdb|3ME6|D Chain D, Crystal Structure Of Cytochrome 2b4 In Complex With The
Anti-Platelet Drug Clopidogrel
pdb|3MVR|A Chain A, Crystal Structure Of Cytochrome P450 2b4-H226y In A Closed
Conformation
pdb|3MVR|B Chain B, Crystal Structure Of Cytochrome P450 2b4-H226y In A Closed
Conformation
pdb|3R1A|A Chain A, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|B Chain B, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|C Chain C, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|D Chain D, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|E Chain E, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|F Chain F, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|G Chain G, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|H Chain H, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1B|A Chain A, Open Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1B|B Chain B, Open Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1B|C Chain C, Open Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1B|D Chain D, Open Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3TMZ|A Chain A, Crystal Structure Of P450 2b4(H226y) In Complex With
Amlodipine
pdb|3UAS|A Chain A, Cytochrome P450 2b4 Covalently Bound To The
Mechanism-based Inactivator 9-ethynylphenanthrene
Length = 476
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 71/157 (45%), Gaps = 7/157 (4%)
Query: 312 EQQISMLLWEPIIETSDTTLVTTEWAMYELAKDPMRQDRLFQKIQSVCRSNKFTE-ENIA 370
Q + + + ++TT T + + K P +R+ ++I+ V S++ ++ A
Sbjct: 266 HQNLILTVLSLFFAGTETTSTTLRYGFLLMLKYPHVTERVQKEIEQVIGSHRPPALDDRA 325
Query: 371 QVPYLGAVFHETLRKYSPAPIVPLRFAH---EDTEIGGYFIPAGSEIAINIYGCNMDKKQ 427
++PY AV HE R ++P H +DT+ GY IP +E+ + D +
Sbjct: 326 KMPYTDAVIHEIQRL---GDLIPFGVPHTVTKDTQFRGYVIPKNTEVFPVLSSALHDPRY 382
Query: 428 WENPDEWKPERFLDGQYDPADLYKTMAFGTGKRVCAG 464
+E P+ + P FLD M F GKR+C G
Sbjct: 383 FETPNTFNPGHFLDANGALKRNEGFMPFSLGKRICLG 419
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 42/73 (57%), Gaps = 3/73 (4%)
Query: 48 KLPPVPEVPGRLPLIGNLLQLKEKKPHMTFTRWAEVYGPIYSIKTGASTMIVLNSADVAK 107
KLPP P LP++GNLLQ+ K +F R E YG ++++ G+ ++VL D +
Sbjct: 10 KLPPGPSP---LPVLGNLLQMDRKGLLRSFLRLREKYGDVFTVYLGSRPVVVLCGTDAIR 66
Query: 108 EAMVTRYPSISTR 120
EA+V + + S R
Sbjct: 67 EALVDQAEAFSGR 79
>pdb|2Q6N|A Chain A, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|B Chain B, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|C Chain C, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|D Chain D, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|E Chain E, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|F Chain F, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|G Chain G, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
Length = 478
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/156 (26%), Positives = 71/156 (45%), Gaps = 7/156 (4%)
Query: 313 QQISMLLWEPIIETSDTTLVTTEWAMYELAKDPMRQDRLFQKIQSVCRSNKFTE-ENIAQ 371
Q + + + ++TT T + + K P +R+ ++I+ V S++ ++ A+
Sbjct: 267 QNLILTVLSLFFAGTETTSTTLRYGFLLMLKYPHVTERVQKEIEQVIGSHRPPALDDRAK 326
Query: 372 VPYLGAVFHETLRKYSPAPIVPLRFAH---EDTEIGGYFIPAGSEIAINIYGCNMDKKQW 428
+PY AV HE R ++P H +DT+ GY IP +E+ + D + +
Sbjct: 327 MPYTDAVIHEIQRL---GDLIPFGVPHTVTKDTQFRGYVIPKNTEVFPVLSSALHDPRYF 383
Query: 429 ENPDEWKPERFLDGQYDPADLYKTMAFGTGKRVCAG 464
E P+ + P FLD M F GKR+C G
Sbjct: 384 ETPNTFNPGHFLDANGALKRNEGFMPFSLGKRICLG 419
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 42/73 (57%), Gaps = 3/73 (4%)
Query: 48 KLPPVPEVPGRLPLIGNLLQLKEKKPHMTFTRWAEVYGPIYSIKTGASTMIVLNSADVAK 107
KLPP P LP++GNLLQ+ K +F R E YG ++++ G+ ++VL D +
Sbjct: 10 KLPPGPSP---LPVLGNLLQMDRKGLLRSFLRLREKYGDVFTVYLGSRPVVVLCGTDAIR 66
Query: 108 EAMVTRYPSISTR 120
EA+V + + S R
Sbjct: 67 EALVDQAEAFSGR 79
>pdb|4H1N|A Chain A, Crystal Structure Of P450 2b4 F297a Mutant In Complex With
Anti- Platelet Drug Clopidogrel
Length = 479
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 40/142 (28%), Positives = 67/142 (47%), Gaps = 7/142 (4%)
Query: 327 SDTTLVTTEWAMYELAKDPMRQDRLFQKIQSVCRSNKFTE-ENIAQVPYLGAVFHETLRK 385
++TT T + + K P +R+ ++I+ V S++ ++ A++PY AV HE R
Sbjct: 281 TETTSTTLRYGFLLMLKYPHVTERVQKEIEQVIGSHRPPALDDRAKMPYTDAVIHEIQRL 340
Query: 386 YSPAPIVPLRFAH---EDTEIGGYFIPAGSEIAINIYGCNMDKKQWENPDEWKPERFLDG 442
++P H +DT+ GY IP +E+ + D + +E P+ + P FLD
Sbjct: 341 ---GDLIPFGVPHTVTKDTQFRGYVIPKNTEVFPVLSSALHDPRYFETPNTFNPGHFLDA 397
Query: 443 QYDPADLYKTMAFGTGKRVCAG 464
M F GKR+C G
Sbjct: 398 NGALKRNEGFMPFSLGKRICLG 419
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 42/73 (57%), Gaps = 3/73 (4%)
Query: 48 KLPPVPEVPGRLPLIGNLLQLKEKKPHMTFTRWAEVYGPIYSIKTGASTMIVLNSADVAK 107
KLPP P LP++GNLLQ+ K +F R E YG ++++ G+ ++VL D +
Sbjct: 10 KLPPGPSP---LPVLGNLLQMDRKGLLRSFLRLREKYGDVFTVYLGSRPVVVLCGTDAIR 66
Query: 108 EAMVTRYPSISTR 120
EA+V + + S R
Sbjct: 67 EALVDQAEAFSGR 79
>pdb|4DVQ|A Chain A, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|B Chain B, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|C Chain C, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|D Chain D, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|E Chain E, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|F Chain F, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|G Chain G, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|H Chain H, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|I Chain I, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|J Chain J, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|K Chain K, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|L Chain L, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4FDH|A Chain A, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|B Chain B, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|C Chain C, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|D Chain D, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|E Chain E, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|F Chain F, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|G Chain G, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|H Chain H, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|I Chain I, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|J Chain J, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|K Chain K, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|L Chain L, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
Length = 483
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 39/138 (28%), Positives = 67/138 (48%), Gaps = 3/138 (2%)
Query: 328 DTTLVTTEWAMYELAKDPMRQDRLFQKIQSVCRS-NKFTEENIAQVPYLGAVFHETLRKY 386
DTT ++ELA++P Q L Q+ + S ++ ++ ++P L A ETLR Y
Sbjct: 291 DTTAFPLLMTLFELARNPDVQQILRQESLAAAASISEHPQKATTELPLLRAALKETLRLY 350
Query: 387 SPAPIVPLRFAHEDTEIGGYFIPAGSEIAINIYGCNMDKKQWENPDEWKPERFLDGQYDP 446
P + R D + Y IPAG+ + + +Y + + P+ + P+R+LD +
Sbjct: 351 -PVGLFLERVVSSDLVLQNYHIPAGTLVQVFLYSLGRNAALFPRPERYNPQRWLDIRGSG 409
Query: 447 ADLYKTMAFGTGKRVCAG 464
+ + + FG G R C G
Sbjct: 410 RNFHH-VPFGFGMRQCLG 426
>pdb|2RFB|A Chain A, Crystal Structure Of A Cytochrome P450 From The
Thermoacidophilic Archaeon Picrophilus Torridus
pdb|2RFB|B Chain B, Crystal Structure Of A Cytochrome P450 From The
Thermoacidophilic Archaeon Picrophilus Torridus
pdb|2RFB|C Chain C, Crystal Structure Of A Cytochrome P450 From The
Thermoacidophilic Archaeon Picrophilus Torridus
pdb|2RFC|A Chain A, Ligand Bound (4-Phenylimidazole) Crystal Structure Of A
Cytochrome P450 From The Thermoacidophilic Archaeon
Picrophilus Torridus
pdb|2RFC|B Chain B, Ligand Bound (4-Phenylimidazole) Crystal Structure Of A
Cytochrome P450 From The Thermoacidophilic Archaeon
Picrophilus Torridus
pdb|2RFC|C Chain C, Ligand Bound (4-Phenylimidazole) Crystal Structure Of A
Cytochrome P450 From The Thermoacidophilic Archaeon
Picrophilus Torridus
pdb|2RFC|D Chain D, Ligand Bound (4-Phenylimidazole) Crystal Structure Of A
Cytochrome P450 From The Thermoacidophilic Archaeon
Picrophilus Torridus
Length = 343
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/104 (32%), Positives = 53/104 (50%), Gaps = 10/104 (9%)
Query: 381 ETLRKYSPAPIVPLRFAHEDTEIGGYFIPAGSEIAINIYGCNMDKKQWENPDEWKPERFL 440
ETLR YSP +P RFA ED+ I I G ++ + + N D+ ++ PD +K R
Sbjct: 224 ETLRYYSPIQFLPHRFAAEDSYINNKKIKKGDQVIVYLGSANRDETFFDEPDLFKIGR-- 281
Query: 441 DGQYDPADLYKTMAFGTGKRVCAGSLQASLIACTAIGRLVQEFK 484
+++ +AFG G +C G+ A L A A+ ++ FK
Sbjct: 282 ------REMH--LAFGIGIHMCLGAPLARLEASIALNDILNHFK 317
>pdb|3K1O|A Chain A, Crystal Structure Of Sterol 14-alpha Demethylase (cyp51)
From Trypanosoma Cruzi In Complex With A Potential
Antichagasic Drug, Posaconazole
pdb|3KSW|A Chain A, Crystal Structure Of Sterol 14alpha-demethylase (cyp51)
From Trypanosoma Cruzi In Complex With An Inhibitor Vnf
((4-(4-
Chlorophenyl)-n-[2-(1h-imidazol-1-yl)-1-
phenylethyl]benzamide)
Length = 458
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 77/166 (46%), Gaps = 12/166 (7%)
Query: 329 TTLVTTEWAMYEL--AKDPMRQDRLFQKIQSVCRSNKFTEENIA-QVPYLGAVFHETLRK 385
T+ +TT W+M L K+ D+L ++I + +N+ ++P+ E++R+
Sbjct: 266 TSTITTSWSMLHLMHPKNKKWLDKLHKEIDEF--PAQLNYDNVMDEMPFAERCVRESIRR 323
Query: 386 YSPAPIVPLRFAHEDTEIGGYFIPAGSEIAINIYGCNMDKKQWENPDEWKPERFLDGQYD 445
P +V +R + ++G Y +P G IA + + D++ + NP W PER D + D
Sbjct: 324 DPPLLMV-MRMVKAEVKVGSYVVPKGDIIACSPLLSHHDEEAFPNPRLWDPER--DEKVD 380
Query: 446 PADLYKTMAFGTGKRVCAGSLQASLIACTAIGRLVQEFKWNLREGE 491
A + FG G C G A L T + +E+ + L E
Sbjct: 381 GA----FIGFGAGVHKCIGQKFALLQVKTILATAFREYDFQLLRDE 422
>pdb|2WUZ|A Chain A, X-Ray Structure Of Cyp51 From Trypanosoma Cruzi In Complex
With Fluconazole In Alternative Conformation
pdb|2WUZ|B Chain B, X-Ray Structure Of Cyp51 From Trypanosoma Cruzi In Complex
With Fluconazole In Alternative Conformation
pdb|2WX2|A Chain A, X-Ray Structure Of Cyp51 From The Human Pathogen
Trypanosoma Cruzi In Complex With Fluconazole
pdb|2WX2|B Chain B, X-Ray Structure Of Cyp51 From The Human Pathogen
Trypanosoma Cruzi In Complex With Fluconazole
Length = 473
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 78/171 (45%), Gaps = 12/171 (7%)
Query: 329 TTLVTTEWAMYEL--AKDPMRQDRLFQKIQSVCRSNKFTEENIA-QVPYLGAVFHETLRK 385
T+ +TT W+M L K+ D+L ++I + +N+ ++P+ E++R+
Sbjct: 281 TSTITTSWSMLHLMHPKNKKWLDKLHKEIDEF--PAQLNYDNVMDEMPFAERCVRESIRR 338
Query: 386 YSPAPIVPLRFAHEDTEIGGYFIPAGSEIAINIYGCNMDKKQWENPDEWKPERFLDGQYD 445
P +V +R + ++G Y +P G IA + + D++ + NP W PER D + D
Sbjct: 339 DPPLLMV-MRMVKAEVKVGSYVVPKGDIIACSPLLSHHDEEAFPNPRLWDPER--DEKVD 395
Query: 446 PADLYKTMAFGTGKRVCAGSLQASLIACTAIGRLVQEFKWNLREGEEESVD 496
A + FG G C G A L T + +E+ + L E D
Sbjct: 396 GA----FIGFGAGVHKCIGQKFALLQVKTILATAFREYDFQLLRDEVPDPD 442
>pdb|3KHM|A Chain A, Crystal Structure Of Sterol 14alpha-Demethylase (Cyp51)
From Trypanosoma Cruzi In Complex With Inhibitor
Fluconazole
Length = 464
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 78/171 (45%), Gaps = 12/171 (7%)
Query: 329 TTLVTTEWAMYEL--AKDPMRQDRLFQKIQSVCRSNKFTEENIA-QVPYLGAVFHETLRK 385
T+ +TT W+M L K+ D+L ++I + +N+ ++P+ E++R+
Sbjct: 272 TSTITTSWSMLHLMHPKNKKWLDKLHKEIDEF--PAQLNYDNVMDEMPFAERCVRESIRR 329
Query: 386 YSPAPIVPLRFAHEDTEIGGYFIPAGSEIAINIYGCNMDKKQWENPDEWKPERFLDGQYD 445
P +V +R + ++G Y +P G IA + + D++ + NP W PER D + D
Sbjct: 330 DPPLLMV-MRMVKAEVKVGSYVVPKGDIIACSPLLSHHDEEAFPNPRLWDPER--DEKVD 386
Query: 446 PADLYKTMAFGTGKRVCAGSLQASLIACTAIGRLVQEFKWNLREGEEESVD 496
A + FG G C G A L T + +E+ + L E D
Sbjct: 387 GA----FIGFGAGVHKCIGQKFALLQVKTILATAFREYDFQLLRDEVPDPD 433
>pdb|3L4D|A Chain A, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Leishmania Infantum In Complex With Fluconazole
pdb|3L4D|B Chain B, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Leishmania Infantum In Complex With Fluconazole
pdb|3L4D|C Chain C, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Leishmania Infantum In Complex With Fluconazole
pdb|3L4D|D Chain D, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Leishmania Infantum In Complex With Fluconazole
Length = 453
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 39/183 (21%), Positives = 84/183 (45%), Gaps = 15/183 (8%)
Query: 310 LTEQQISMLLWEPIIETSDTTLVTTEWAMYELAKDPMRQDRLFQKIQSVCR-SNKFTEEN 368
+++ ++ ++ + T+ +TT W++ L DP + L + Q + + +N
Sbjct: 248 MSQHEVCGMIVAAMFAGQHTSTITTTWSLLHLM-DPRNKRHLAKLHQEIDEFPAQLNYDN 306
Query: 369 I-AQVPYLGAVFHETLRKYSPAPIVPLRFAHEDTEIGGYFIPAGSEIAINIYGCNMDKKQ 427
+ ++P+ E++R+ P ++ +R + ++G Y +P G IA + + D++
Sbjct: 307 VMEEMPFAEQCARESIRR-DPPLVMLMRKVLKPVQVGKYVVPEGDIIACSPLLSHQDEEA 365
Query: 428 WENPDEWKPER---FLDGQYDPADLYKTMAFGTGKRVCAGSLQASLIACTAIGRLVQEFK 484
+ NP EW PER +DG + FG G C G L T + +++++
Sbjct: 366 FPNPREWNPERNMKLVDGAF--------CGFGAGVHKCIGEKFGLLQVKTVLATVLRDYD 417
Query: 485 WNL 487
+ L
Sbjct: 418 FEL 420
>pdb|2WIV|A Chain A, Cytochrome-P450 Xpla Heme Domain P21
pdb|2WIV|B Chain B, Cytochrome-P450 Xpla Heme Domain P21
pdb|2WIY|A Chain A, Cytochrome P450 Xpla Heme Domain P21212
Length = 394
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 51/109 (46%), Gaps = 8/109 (7%)
Query: 376 GAVFHETLRKYSPAPIVPLRFAHEDTEIGGYFIPAGSEIAINIYGCNMDKKQWENPDEWK 435
A+ +E +R P + LRF ED EIGG I AGS I I N D + +++PD +
Sbjct: 267 AAIINEMVR-MDPPQLSFLRFPTEDVEIGGVLIEAGSPIRFMIGAANRDPEVFDDPDVFD 325
Query: 436 PERFLDGQYDPADLYKTMAFGTGKRVCAGSLQASLIACTAIGRLVQEFK 484
R P + ++FG G CAG + + A T L + ++
Sbjct: 326 HTR-------PPAASRNLSFGLGPHSCAGQIISRAEATTVFAVLAERYE 367
>pdb|2FR7|A Chain A, Crystal Structure Of Cytochrome P450 Cyp199a2
pdb|4DNJ|A Chain A, The Crystal Structures Of 4-Methoxybenzoate Bound Cyp199a2
Length = 412
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/243 (23%), Positives = 94/243 (38%), Gaps = 32/243 (13%)
Query: 231 EVFKILVLDIMEGAIEVDWRDFFPYLRWVPNK-GVEMKIQRLCTRRQAVMDVLISEAKSR 289
E + + V G + + PY V N G ++++ R A ++E R
Sbjct: 156 EAYPLSVFPDAMGLKQEGRENLLPYAGLVFNAFGPPNELRQSAIERSAPHQAYVAEQCQR 215
Query: 290 --IASGQELNCYVDHLLSEVKSLTEQQISMLLWEPIIETSDTTLVTTEWAMYELAKDPMR 347
+A G C H S+ +T ++ +L+ + DTT+ A+Y LA+ P
Sbjct: 216 PNLAPGGFGACI--HAFSDTGEITPEEAPLLVRSLLSAGLDTTVNGIAAAVYCLARFPDE 273
Query: 348 QDRLFQKIQSVCRSNKFTEENIAQVPYLGAVFHETLRKYSPAPIVPLRFAHEDTEIGGYF 407
RL R++ N F E +R SP R D E+ G
Sbjct: 274 FARL--------RADPSLARN---------AFEEAVRFESPVQTF-FRTTTRDVELAGAT 315
Query: 408 IPAGSEIAINIYGCNMDKKQWENPDEWKPERFLDGQYDPADLYKTMAFGTGKRVCAGSLQ 467
I G ++ + + N D ++W++PD + R G + FG+G +C G L
Sbjct: 316 IGEGEKVLMFLGSANRDPRRWDDPDRYDITRKTSGH---------VGFGSGVHMCVGQLV 366
Query: 468 ASL 470
A L
Sbjct: 367 ARL 369
>pdb|4EP6|A Chain A, Crystal Structure Of The Xpla Heme Domain In Complex With
Imidazole And Peg
Length = 392
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 51/109 (46%), Gaps = 8/109 (7%)
Query: 376 GAVFHETLRKYSPAPIVPLRFAHEDTEIGGYFIPAGSEIAINIYGCNMDKKQWENPDEWK 435
A+ +E +R P + LRF ED EIGG I AGS I I N D + +++PD +
Sbjct: 265 AAIINEMVR-MDPPQLSFLRFPTEDVEIGGVLIEAGSPIRFMIGAANRDPEVFDDPDVFD 323
Query: 436 PERFLDGQYDPADLYKTMAFGTGKRVCAGSLQASLIACTAIGRLVQEFK 484
R P + ++FG G CAG + + A T L + ++
Sbjct: 324 HTR-------PPAASRNLSFGLGPHSCAGQIISRAEATTVFAVLAERYE 365
>pdb|4DNZ|A Chain A, The Crystal Structures Of Cyp199a4
pdb|4DNZ|B Chain B, The Crystal Structures Of Cyp199a4
pdb|4DNZ|C Chain C, The Crystal Structures Of Cyp199a4
pdb|4DNZ|D Chain D, The Crystal Structures Of Cyp199a4
pdb|4DO1|A Chain A, The Crystal Structures Of 4-Methoxybenzoate Bound Cyp199a4
pdb|4DO1|B Chain B, The Crystal Structures Of 4-Methoxybenzoate Bound Cyp199a4
pdb|4DO1|C Chain C, The Crystal Structures Of 4-Methoxybenzoate Bound Cyp199a4
pdb|4DO1|D Chain D, The Crystal Structures Of 4-Methoxybenzoate Bound Cyp199a4
pdb|4EGM|A Chain A, The X-ray Crystal Structure Of Cyp199a4 In Complex With
4-ethylbenzoic Acid
pdb|4EGM|B Chain B, The X-ray Crystal Structure Of Cyp199a4 In Complex With
4-ethylbenzoic Acid
pdb|4EGM|C Chain C, The X-ray Crystal Structure Of Cyp199a4 In Complex With
4-ethylbenzoic Acid
pdb|4EGM|D Chain D, The X-ray Crystal Structure Of Cyp199a4 In Complex With
4-ethylbenzoic Acid
pdb|4EGN|A Chain A, The X-ray Crystal Structure Of Cyp199a4 In Complex With
Veratric Acid
pdb|4EGN|B Chain B, The X-ray Crystal Structure Of Cyp199a4 In Complex With
Veratric Acid
pdb|4EGN|C Chain C, The X-ray Crystal Structure Of Cyp199a4 In Complex With
Veratric Acid
pdb|4EGN|D Chain D, The X-ray Crystal Structure Of Cyp199a4 In Complex With
Veratric Acid
pdb|4EGO|A Chain A, The X-ray Crystal Structure Of Cyp199a4 In Complex With
Indole-6- Carboxylic Acid
pdb|4EGO|B Chain B, The X-ray Crystal Structure Of Cyp199a4 In Complex With
Indole-6- Carboxylic Acid
pdb|4EGO|C Chain C, The X-ray Crystal Structure Of Cyp199a4 In Complex With
Indole-6- Carboxylic Acid
pdb|4EGO|D Chain D, The X-ray Crystal Structure Of Cyp199a4 In Complex With
Indole-6- Carboxylic Acid
pdb|4EGP|A Chain A, The X-ray Crystal Structure Of Cyp199a4 In Complex With
2-naphthoic Acid
pdb|4EGP|B Chain B, The X-ray Crystal Structure Of Cyp199a4 In Complex With
2-naphthoic Acid
Length = 410
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 60/256 (23%), Positives = 98/256 (38%), Gaps = 35/256 (13%)
Query: 231 EVFKILVLDIMEGAIEVDWRDFFPYLRWVPNK-GVEMKIQRLCTRRQAVMDVLISEAKSR 289
E + + V G + PY V N G ++++ R A ++E R
Sbjct: 154 EAYPLSVFPDAMGLKQEGREHLLPYAGLVFNAFGPPNELRQTAIERSAPHQAYVNEQCQR 213
Query: 290 --IASGQELNCYVDHLLSEVKSLTEQQISMLLWEPIIETSDTTLVTTEWAMYELAKDPMR 347
+A G C H ++ +T + +L+ + DTT+ A+Y LA+ P
Sbjct: 214 PNLAPGGFGACI--HAFTDTGEITPDEAPLLVRSLLSAGLDTTVNGIGAAVYCLARFPGE 271
Query: 348 QDRLFQKIQSVCRSNKFTEENIAQVPYLGAVFHETLRKYSPAPIVPLRFAHEDTEIGGYF 407
RL RS+ N F E +R SP R + E+GG
Sbjct: 272 LQRL--------RSDPTLARN---------AFEEAVRFESPVQTF-FRTTTREVELGGAV 313
Query: 408 IPAGSEIAINIYGCNMDKKQWENPDEWKPERFLDGQYDPADLYKTMAFGTGKRVCAGSLQ 467
I G ++ + + N D ++W +PD + R G + FG+G +C G L
Sbjct: 314 IGEGEKVLMFLGSANRDPRRWSDPDLYDITRKTSGH---------VGFGSGVHMCVGQLV 364
Query: 468 ASL---IACTAIGRLV 480
A L + +A+ R V
Sbjct: 365 ARLEGEVMLSALARKV 380
>pdb|3AWP|A Chain A, Cytochrome P450sp Alpha (Cyp152b1) Mutant F288g
Length = 415
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 40/72 (55%), Gaps = 2/72 (2%)
Query: 369 IAQVPYLGAVFHETLRKYSP-APIVPLRFAHEDTEIGGYFIPAGSEIAINIYGCNMDKKQ 427
+ Q P +F + +R++ P P V R A +D E G P G ++ +++YG N D
Sbjct: 267 LVQQPDYAELFVQEVRRFYPFGPAVVAR-ASQDFEWEGMAFPEGRQVVLDLYGSNHDAAT 325
Query: 428 WENPDEWKPERF 439
W +P E++PERF
Sbjct: 326 WADPQEFRPERF 337
>pdb|3A4Z|A Chain A, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution
pdb|3A4Z|B Chain B, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution
pdb|3A4Z|C Chain C, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution
pdb|3A4Z|D Chain D, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution
pdb|3A4Z|E Chain E, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution
pdb|3A50|A Chain A, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution With Bound Vitamin D3
pdb|3A50|B Chain B, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution With Bound Vitamin D3
pdb|3A50|C Chain C, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution With Bound Vitamin D3
pdb|3A50|D Chain D, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution With Bound Vitamin D3
pdb|3A50|E Chain E, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution With Bound Vitamin D3
pdb|3A51|A Chain A, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution With Bound 25-Hydroxyvitamin D3
pdb|3A51|B Chain B, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution With Bound 25-Hydroxyvitamin D3
pdb|3A51|C Chain C, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution With Bound 25-Hydroxyvitamin D3
pdb|3A51|D Chain D, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution With Bound 25-Hydroxyvitamin D3
pdb|3A51|E Chain E, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution With Bound 25-Hydroxyvitamin D3
Length = 411
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/115 (31%), Positives = 46/115 (40%), Gaps = 10/115 (8%)
Query: 369 IAQVPYL-GAVFHETLRKYSPAPIVPLRFAHEDTEIGGYFIPAGSEIAINIYGCNMDKKQ 427
+A+ P L + E LR SP P+RF ED G IPAG + + + N D
Sbjct: 262 LAEDPSLISSAVEEFLRFDSPVSQAPIRFTAEDVTYSGVTIPAGEMVMLGLAAANRDADW 321
Query: 428 WENPDEWKPERFLDGQYDPADLYKTMAFGTGKRVCAGSLQASLIACTAIGRLVQE 482
PD R D + FG G C G+ A L AIGRL +
Sbjct: 322 MPEPDRLDITR---------DASGGVFFGHGIHFCLGAQLARLEGRVAIGRLFAD 367
>pdb|3A4G|A Chain A, Structure Of Cytochrome P450 Vdh From Pseudonocardia
Autotrophica (Trigonal Crystal Form)
pdb|3A4H|A Chain A, Structure Of Cytochrome P450 Vdh From Pseudonocardia
Autotrophica (Orthorhombic Crystal Form)
Length = 411
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/115 (31%), Positives = 46/115 (40%), Gaps = 10/115 (8%)
Query: 369 IAQVPYL-GAVFHETLRKYSPAPIVPLRFAHEDTEIGGYFIPAGSEIAINIYGCNMDKKQ 427
+A+ P L + E LR SP P+RF ED G IPAG + + + N D
Sbjct: 262 LAEDPSLISSAVEEFLRFDSPVSQAPIRFTAEDVTYSGVTIPAGEMVMLGLAAANRDADW 321
Query: 428 WENPDEWKPERFLDGQYDPADLYKTMAFGTGKRVCAGSLQASLIACTAIGRLVQE 482
PD R D + FG G C G+ A L AIGRL +
Sbjct: 322 MPEPDRLDITR---------DASGGVFFGHGIHFCLGAQLARLEGRVAIGRLFAD 367
>pdb|3VM4|A Chain A, Cytochrome P450sp Alpha (Cyp152b1) In Complex With
(R)-Ibuprophen
Length = 407
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 40/72 (55%), Gaps = 2/72 (2%)
Query: 369 IAQVPYLGAVFHETLRKYSPA-PIVPLRFAHEDTEIGGYFIPAGSEIAINIYGCNMDKKQ 427
+ Q P +F + +R++ P P V R A +D E G P G ++ +++YG N D
Sbjct: 259 LVQQPDYAELFVQEVRRFYPFFPAVVAR-ASQDFEWEGMAFPEGRQVVLDLYGSNHDAAT 317
Query: 428 WENPDEWKPERF 439
W +P E++PERF
Sbjct: 318 WADPQEFRPERF 329
>pdb|3VOO|A Chain A, Cytochrome P450sp Alpha (cyp152b1) Mutant A245e
Length = 407
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 40/72 (55%), Gaps = 2/72 (2%)
Query: 369 IAQVPYLGAVFHETLRKYSPA-PIVPLRFAHEDTEIGGYFIPAGSEIAINIYGCNMDKKQ 427
+ Q P +F + +R++ P P V R A +D E G P G ++ +++YG N D
Sbjct: 259 LVQQPDYAELFVQEVRRFYPFFPAVVAR-ASQDFEWEGMAFPEGRQVVLDLYGSNHDAAT 317
Query: 428 WENPDEWKPERF 439
W +P E++PERF
Sbjct: 318 WADPQEFRPERF 329
>pdb|3VNO|A Chain A, Cytochrome P450sp Alpha (cyp152b1) Mutant R241e
Length = 407
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 40/72 (55%), Gaps = 2/72 (2%)
Query: 369 IAQVPYLGAVFHETLRKYSPA-PIVPLRFAHEDTEIGGYFIPAGSEIAINIYGCNMDKKQ 427
+ Q P +F + +R++ P P V R A +D E G P G ++ +++YG N D
Sbjct: 259 LVQQPDYAELFVQEVRRFYPFFPAVVAR-ASQDFEWEGMAFPEGRQVVLDLYGSNHDAAT 317
Query: 428 WENPDEWKPERF 439
W +P E++PERF
Sbjct: 318 WADPQEFRPERF 329
>pdb|3AWM|A Chain A, Cytochrome P450sp Alpha (Cyp152b1) Wild-Type With Palmitic
Acid
Length = 415
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 40/72 (55%), Gaps = 2/72 (2%)
Query: 369 IAQVPYLGAVFHETLRKYSPA-PIVPLRFAHEDTEIGGYFIPAGSEIAINIYGCNMDKKQ 427
+ Q P +F + +R++ P P V R A +D E G P G ++ +++YG N D
Sbjct: 267 LVQQPDYAELFVQEVRRFYPFFPAVVAR-ASQDFEWEGMAFPEGRQVVLDLYGSNHDAAT 325
Query: 428 WENPDEWKPERF 439
W +P E++PERF
Sbjct: 326 WADPQEFRPERF 337
>pdb|3AWQ|A Chain A, Cytochrome P450sp Alpha (Cyp152b1) Mutant L78f
Length = 415
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 40/72 (55%), Gaps = 2/72 (2%)
Query: 369 IAQVPYLGAVFHETLRKYSPA-PIVPLRFAHEDTEIGGYFIPAGSEIAINIYGCNMDKKQ 427
+ Q P +F + +R++ P P V R A +D E G P G ++ +++YG N D
Sbjct: 267 LVQQPDYAELFVQEVRRFYPFFPAVVAR-ASQDFEWEGMAFPEGRQVVLDLYGSNHDAAT 325
Query: 428 WENPDEWKPERF 439
W +P E++PERF
Sbjct: 326 WADPQEFRPERF 337
>pdb|3TYW|A Chain A, Crystal Structure Of Cyp105n1 From Streptomyces Coelicolor
A3(2)
pdb|3TYW|B Chain B, Crystal Structure Of Cyp105n1 From Streptomyces Coelicolor
A3(2)
pdb|3TYW|C Chain C, Crystal Structure Of Cyp105n1 From Streptomyces Coelicolor
A3(2)
pdb|3TYW|D Chain D, Crystal Structure Of Cyp105n1 From Streptomyces Coelicolor
A3(2)
pdb|4FXB|A Chain A, Crystal Structure Of Cyp105n1 From Streptomyces
Coelicolor: A Cytochrome P450 Oxidase In The Coelibactin
Siderophore Biosynthetic Pathway
pdb|4FXB|B Chain B, Crystal Structure Of Cyp105n1 From Streptomyces
Coelicolor: A Cytochrome P450 Oxidase In The Coelibactin
Siderophore Biosynthetic Pathway
Length = 417
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 53/123 (43%), Gaps = 17/123 (13%)
Query: 377 AVFHETLRKYSPAPIVPLRFAHEDTEIGGYFIPAGSEIAINIYGCNMDKKQWENPDEWKP 436
A E LR S A +PLR A ED E+ G +PA + + G N D +Q+++P+
Sbjct: 284 AAVDELLRVLSVADSIPLRVAAEDIELSGRTVPADDGVIALLAGANHDPEQFDDPER--- 340
Query: 437 ERFLDGQYDPADLYKT----MAFGTGKRVCAGSLQASLIACTAIGRLVQEFKWNLREGEE 492
D ++T +AFG G C G A L A+ L++ GE
Sbjct: 341 ----------VDFHRTDNHHVAFGYGVHQCVGQHLARLELEVALETLLRRVPTLRLAGER 390
Query: 493 ESV 495
+ V
Sbjct: 391 DQV 393
>pdb|3EJB|B Chain B, Crystal Structure Of P450bioi In Complex With
Tetradecanoic Acid Ligated Acyl Carrier Protein
pdb|3EJB|D Chain D, Crystal Structure Of P450bioi In Complex With
Tetradecanoic Acid Ligated Acyl Carrier Protein
pdb|3EJB|F Chain F, Crystal Structure Of P450bioi In Complex With
Tetradecanoic Acid Ligated Acyl Carrier Protein
pdb|3EJB|H Chain H, Crystal Structure Of P450bioi In Complex With
Tetradecanoic Acid Ligated Acyl Carrier Protein
pdb|3EJD|B Chain B, Crystal Structure Of P450bioi In Complex With Hexadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
pdb|3EJD|D Chain D, Crystal Structure Of P450bioi In Complex With Hexadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
pdb|3EJD|F Chain F, Crystal Structure Of P450bioi In Complex With Hexadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
pdb|3EJD|H Chain H, Crystal Structure Of P450bioi In Complex With Hexadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
pdb|3EJE|B Chain B, Crystal Structure Of P450bioi In Complex With Octadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
pdb|3EJE|D Chain D, Crystal Structure Of P450bioi In Complex With Octadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
pdb|3EJE|F Chain F, Crystal Structure Of P450bioi In Complex With Octadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
pdb|3EJE|H Chain H, Crystal Structure Of P450bioi In Complex With Octadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
Length = 404
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 37/122 (30%), Positives = 52/122 (42%), Gaps = 18/122 (14%)
Query: 375 LGAVFHETLRKYSPAPIVPLRFAHEDTEIGGYFIPAGSEIAINIYGCNMDKKQWENPDEW 434
+G E LR SP + R A ED +I G I G ++ + + N D + NPD +
Sbjct: 267 IGTAVEECLRYESPTQMTA-RVASEDIDICGVTIRQGEQVYLLLGAANRDPSIFTNPDVF 325
Query: 435 KPERFLDGQYDPADLYKTMAFGTGKRVCAGSLQASLIACTAIGRLVQ--------EFKWN 486
R + ++FG G VC GS A L A AI L+Q +F+W
Sbjct: 326 DITRSPNPH---------LSFGHGHHVCLGSSLARLEAQIAINTLLQRMPSLNLADFEWR 376
Query: 487 LR 488
R
Sbjct: 377 YR 378
>pdb|1GWI|A Chain A, The 1.92 A Structure Of Streptomyces Coelicolor A3(2)
Cyp154c1: A New Monooxygenase That Functionalizes
Macrolide Ring Systems
pdb|1GWI|B Chain B, The 1.92 A Structure Of Streptomyces Coelicolor A3(2)
Cyp154c1: A New Monooxygenase That Functionalizes
Macrolide Ring Systems
Length = 411
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/112 (32%), Positives = 52/112 (46%), Gaps = 17/112 (15%)
Query: 377 AVFHETLRKYSPAPIVPLRFAHEDTEIGGYFIPAGSEIAINIYGCNMDKKQWENPDEWKP 436
AV ETLR +P V +RFA ED +G IPAG + ++ YG ++ P
Sbjct: 277 AVVEETLRFSTPTSHVLIRFAAEDVPVGDRVIPAGDALIVS-YGALGRDERAHGP---TA 332
Query: 437 ERFLDGQYDPADLYKT-----MAFGTGKRVCAGSLQASLIACTAIGRLVQEF 483
+RF DL +T ++FG G VC G+ + + A A+ L F
Sbjct: 333 DRF--------DLTRTSGNRHISFGHGPHVCPGAALSRMEAGVALPALYARF 376
>pdb|3R9C|A Chain A, Crystal Structure Of Mycobacterium Smegmatis Cyp164a2 With
Econazole Bound
pdb|3R9B|A Chain A, Crystal Structure Of Mycobacterium Smegmatis Cyp164a2 In
Ligand Free State
pdb|3R9B|B Chain B, Crystal Structure Of Mycobacterium Smegmatis Cyp164a2 In
Ligand Free State
pdb|3R9B|C Chain C, Crystal Structure Of Mycobacterium Smegmatis Cyp164a2 In
Ligand Free State
Length = 418
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/138 (26%), Positives = 55/138 (39%), Gaps = 18/138 (13%)
Query: 377 AVFHETLRKYSPAPIVPLRFAHEDTEIGGYFIPAGSEIAINIYGCNMDKKQWENPDEWKP 436
AV ET+R P +V R+A +D IG + +P G + + + + D PD + P
Sbjct: 291 AVIEETMRYDPPVQLVS-RYAGDDLTIGTHTVPKGDTMLLLLAAAHRDPTIVGAPDRFDP 349
Query: 437 ERFLDGQYDPADLYKTMAFGTGKRVCAGSLQASLIACTAIGRLVQEFKWNLREGEEE--- 493
+R + + FG G C G+ A L A A+ L F GE E
Sbjct: 350 DRA---------QIRHLGFGKGAHFCLGAPLARLEATVALPALAARFPEARLSGEPEYKR 400
Query: 494 -----SVDTVGLTTHKLH 506
+ T+ + H H
Sbjct: 401 NLTLRGMSTLSIAVHHHH 418
>pdb|1Z8P|A Chain A, Ferrous Dioxygen Complex Of The A245s Cytochrome P450eryf
Length = 404
Score = 45.4 bits (106), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 42/103 (40%), Gaps = 9/103 (8%)
Query: 381 ETLRKYSPAPIVPLRFAHEDTEIGGYFIPAGSEIAINIYGCNMDKKQWENPDEWKPERFL 440
E + +Y P RFA E+ EIGG IP S + + N D KQ+ +P + R
Sbjct: 279 EEILRYIAPPETTTRFAAEEVEIGGVAIPQYSTVLVANGAANRDPKQFPDPHRFDVTR-- 336
Query: 441 DGQYDPADLYKTMAFGTGKRVCAGSLQASLIACTAIGRLVQEF 483
D ++FG G C G A L A+ L F
Sbjct: 337 -------DTRGHLSFGQGIHFCMGRPLAKLEGEVALRALFGRF 372
>pdb|1Z8Q|A Chain A, Ferrous Dioxygen Complex Of The A245t Cytochrome P450eryf
Length = 404
Score = 45.4 bits (106), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 42/103 (40%), Gaps = 9/103 (8%)
Query: 381 ETLRKYSPAPIVPLRFAHEDTEIGGYFIPAGSEIAINIYGCNMDKKQWENPDEWKPERFL 440
E + +Y P RFA E+ EIGG IP S + + N D KQ+ +P + R
Sbjct: 279 EEILRYIAPPETTTRFAAEEVEIGGVAIPQYSTVLVANGAANRDPKQFPDPHRFDVTR-- 336
Query: 441 DGQYDPADLYKTMAFGTGKRVCAGSLQASLIACTAIGRLVQEF 483
D ++FG G C G A L A+ L F
Sbjct: 337 -------DTRGHLSFGQGIHFCMGRPLAKLEGEVALRALFGRF 372
>pdb|1Z8O|A Chain A, Ferrous Dioxygen Complex Of The Wild-Type Cytochrome
P450eryf
Length = 404
Score = 45.4 bits (106), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 42/103 (40%), Gaps = 9/103 (8%)
Query: 381 ETLRKYSPAPIVPLRFAHEDTEIGGYFIPAGSEIAINIYGCNMDKKQWENPDEWKPERFL 440
E + +Y P RFA E+ EIGG IP S + + N D KQ+ +P + R
Sbjct: 279 EEILRYIAPPETTTRFAAEEVEIGGVAIPQYSTVLVANGAANRDPKQFPDPHRFDVTR-- 336
Query: 441 DGQYDPADLYKTMAFGTGKRVCAGSLQASLIACTAIGRLVQEF 483
D ++FG G C G A L A+ L F
Sbjct: 337 -------DTRGHLSFGQGIHFCMGRPLAKLEGEVALRALFGRF 372
>pdb|1JIP|A Chain A, P450eryf(A245s)KETOCONAZOLE
Length = 403
Score = 45.4 bits (106), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 42/103 (40%), Gaps = 9/103 (8%)
Query: 381 ETLRKYSPAPIVPLRFAHEDTEIGGYFIPAGSEIAINIYGCNMDKKQWENPDEWKPERFL 440
E + +Y P RFA E+ EIGG IP S + + N D KQ+ +P + R
Sbjct: 278 EEILRYIAPPETTTRFAAEEVEIGGVAIPQYSTVLVANGAANRDPKQFPDPHRFDVTR-- 335
Query: 441 DGQYDPADLYKTMAFGTGKRVCAGSLQASLIACTAIGRLVQEF 483
D ++FG G C G A L A+ L F
Sbjct: 336 -------DTRGHLSFGQGIHFCMGRPLAKLEGEVALRALFGRF 371
>pdb|1JIO|A Chain A, P450eryf/6deb
Length = 403
Score = 45.4 bits (106), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 42/103 (40%), Gaps = 9/103 (8%)
Query: 381 ETLRKYSPAPIVPLRFAHEDTEIGGYFIPAGSEIAINIYGCNMDKKQWENPDEWKPERFL 440
E + +Y P RFA E+ EIGG IP S + + N D KQ+ +P + R
Sbjct: 278 EEILRYIAPPETTTRFAAEEVEIGGVAIPQYSTVLVANGAANRDPKQFPDPHRFDVTR-- 335
Query: 441 DGQYDPADLYKTMAFGTGKRVCAGSLQASLIACTAIGRLVQEF 483
D ++FG G C G A L A+ L F
Sbjct: 336 -------DTRGHLSFGQGIHFCMGRPLAKLEGEVALRALFGRF 371
>pdb|3GW9|A Chain A, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei Bound To An Inhibitor N-(1-(2,4-
Dichlorophenyl)-2-(1h-Imidazol-1-Yl)ethyl)-4-(5-Phenyl-
1,3, 4-Oxaziazol-2-Yl)benzamide
pdb|3GW9|B Chain B, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei Bound To An Inhibitor N-(1-(2,4-
Dichlorophenyl)-2-(1h-Imidazol-1-Yl)ethyl)-4-(5-Phenyl-
1,3, 4-Oxaziazol-2-Yl)benzamide
pdb|3GW9|C Chain C, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei Bound To An Inhibitor N-(1-(2,4-
Dichlorophenyl)-2-(1h-Imidazol-1-Yl)ethyl)-4-(5-Phenyl-
1,3, 4-Oxaziazol-2-Yl)benzamide
pdb|3GW9|D Chain D, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei Bound To An Inhibitor N-(1-(2,4-
Dichlorophenyl)-2-(1h-Imidazol-1-Yl)ethyl)-4-(5-Phenyl-
1,3, 4-Oxaziazol-2-Yl)benzamide
Length = 450
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/212 (20%), Positives = 89/212 (41%), Gaps = 28/212 (13%)
Query: 280 DVLISEAKSRIASGQELNCYVDHLLSEV----KSLTEQQISMLLWEPIIETSDTTLVTTE 335
+++I+ + + + + LLS V ++ ++ ++ + T+ +TT
Sbjct: 215 EIIIARKEEEVNKDSSTSDLLSGLLSAVYRDGTPMSLHEVCGMIVAAMFAGQHTSSITTT 274
Query: 336 WAMYELAK-------DPMRQDRLFQKIQSVCRSNKFTEENIAQVPYLGAVFHETLRKYSP 388
W+M L + +R++ ++ + N +E +P+ E++R+ P
Sbjct: 275 WSMLHLMHPANVKHLEALRKE--IEEFPAQLNYNNVMDE----MPFAERCARESIRR-DP 327
Query: 389 APIVPLRFAHEDTEIGGYFIPAGSEIAINIYGCNMDKKQWENPDEWKPERFLDGQYDPAD 448
++ +R D ++G Y +P G IA + + D++ + P W PER D + + A
Sbjct: 328 PLLMLMRKVMADVKVGSYVVPKGDIIACSPLLSHHDEEAFPEPRRWDPER--DEKVEGA- 384
Query: 449 LYKTMAFGTGKRVCAGS----LQASLIACTAI 476
+ FG G C G LQ I TA
Sbjct: 385 ---FIGFGAGVHKCIGQKFGLLQVKTILATAF 413
>pdb|3G1Q|A Chain A, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei In Ligand Free State
pdb|3G1Q|B Chain B, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei In Ligand Free State
pdb|3G1Q|C Chain C, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei In Ligand Free State
pdb|3G1Q|D Chain D, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei In Ligand Free State
Length = 450
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/212 (20%), Positives = 89/212 (41%), Gaps = 28/212 (13%)
Query: 280 DVLISEAKSRIASGQELNCYVDHLLSEV----KSLTEQQISMLLWEPIIETSDTTLVTTE 335
+++I+ + + + + LLS V ++ ++ ++ + T+ +TT
Sbjct: 216 EIIIARKEEEVNKDSSTSDLLSGLLSAVYRDGTPMSLHEVCGMIVAAMFAGQHTSSITTT 275
Query: 336 WAMYELAK-------DPMRQDRLFQKIQSVCRSNKFTEENIAQVPYLGAVFHETLRKYSP 388
W+M L + +R++ ++ + N +E +P+ E++R+ P
Sbjct: 276 WSMLHLMHPANVKHLEALRKE--IEEFPAQLNYNNVMDE----MPFAERCARESIRR-DP 328
Query: 389 APIVPLRFAHEDTEIGGYFIPAGSEIAINIYGCNMDKKQWENPDEWKPERFLDGQYDPAD 448
++ +R D ++G Y +P G IA + + D++ + P W PER D + + A
Sbjct: 329 PLLMLMRKVMADVKVGSYVVPKGDIIACSPLLSHHDEEAFPEPRRWDPER--DEKVEGA- 385
Query: 449 LYKTMAFGTGKRVCAGS----LQASLIACTAI 476
+ FG G C G LQ I TA
Sbjct: 386 ---FIGFGAGVHKCIGQKFGLLQVKTILATAF 414
>pdb|2W0A|A Chain A, Cyp51 Of M. Tuberculosis Bound To An Inhibitor
N-[(1s)-2-Methyl-1-(Pyridin-4-Ylcarbamoyl)propyl]
Cyclohexanecarboxamide
Length = 455
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/182 (21%), Positives = 80/182 (43%), Gaps = 7/182 (3%)
Query: 310 LTEQQISMLLWEPIIETSDTTLVTTEWAMYELAKDPMRQDRLFQKIQSV---CRSNKFTE 366
+ +I+ + + T+ T W + EL + + ++ + RS F
Sbjct: 241 FSADEITGMFISMMFAGHHTSSGTASWTLIELMRHRDAYAAVIDELDELYGDGRSVSF-- 298
Query: 367 ENIAQVPYLGAVFHETLRKYSPAPIVPLRFAHEDTEIGGYFIPAGSEIAINIYGCNMDKK 426
+ Q+P L V ETLR + P I+ +R A + E+ G+ I G +A + N +
Sbjct: 299 HALRQIPQLENVLKETLRLHPPL-IILMRVAKGEFEVQGHRIHEGDLVAASPAISNRIPE 357
Query: 427 QWENPDEWKPERFLD-GQYDPADLYKTMAFGTGKRVCAGSLQASLIACTAIGRLVQEFKW 485
+ +P ++ P R+ Q D + + + FG G+ C G+ A + L++E+++
Sbjct: 358 DFPDPHDFVPARYEQPRQEDLLNRWTWIPFGAGRHRCVGAAFAIMQIKAIFSVLLREYEF 417
Query: 486 NL 487
+
Sbjct: 418 EM 419
>pdb|1EA1|A Chain A, Cytochrome P450 14 Alpha-Sterol Demethylase (Cyp51) From
Mycobacterium Tuberculosis In Complex With Fluconazole
pdb|1E9X|A Chain A, Cytochrome P450 14 Alpha-Sterol Demethylase (Cyp51) From
Mycobacterium Tuberculosis In Complex With 4-
Phenylimidazole
pdb|1H5Z|A Chain A, Cytochrome P450 14 Alpha-Sterol Demethylase (Cyp51) From
Mycobacterium Tuberculosis In Ferric Low-Spin State
Length = 455
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/182 (21%), Positives = 80/182 (43%), Gaps = 7/182 (3%)
Query: 310 LTEQQISMLLWEPIIETSDTTLVTTEWAMYELAKDPMRQDRLFQKIQSV---CRSNKFTE 366
+ +I+ + + T+ T W + EL + + ++ + RS F
Sbjct: 241 FSADEITGMFISMMFAGHHTSSGTASWTLIELMRHRDAYAAVIDELDELYGDGRSVSF-- 298
Query: 367 ENIAQVPYLGAVFHETLRKYSPAPIVPLRFAHEDTEIGGYFIPAGSEIAINIYGCNMDKK 426
+ Q+P L V ETLR + P I+ +R A + E+ G+ I G +A + N +
Sbjct: 299 HALRQIPQLENVLKETLRLHPPL-IILMRVAKGEFEVQGHRIHEGDLVAASPAISNRIPE 357
Query: 427 QWENPDEWKPERFLD-GQYDPADLYKTMAFGTGKRVCAGSLQASLIACTAIGRLVQEFKW 485
+ +P ++ P R+ Q D + + + FG G+ C G+ A + L++E+++
Sbjct: 358 DFPDPHDFVPARYEQPRQEDLLNRWTWIPFGAGRHRCVGAAFAIMQIKAIFSVLLREYEF 417
Query: 486 NL 487
+
Sbjct: 418 EM 419
>pdb|1X8V|A Chain A, Estriol-Bound And Ligand-Free Structures Of Sterol
14alpha- Demethylase (Cyp51)
pdb|2BZ9|A Chain A, Ligand-Free Structure Of Sterol 14alpha-Demethylase From
Mycobacterium Tuberculosis In P2(1) Space Group
pdb|2BZ9|B Chain B, Ligand-Free Structure Of Sterol 14alpha-Demethylase From
Mycobacterium Tuberculosis In P2(1) Space Group
pdb|2CI0|A Chain A, High Throughput Screening And X-Ray Crystallography
Assisted Evaluation Of Small Molecule Scaffolds For
Cyp51 Inhibitors
pdb|2CIB|A Chain A, High Throughput Screening And X-Ray Crystallography
Assisted Evaluation Of Small Molecule Scaffolds For
Cyp51 Inhibitors
pdb|2VKU|A Chain A, 4,4'-Dihydroxybenzophenone Mimics Sterol Substrate In The
Binding Site Of Sterol 14alpha-Demethylase (Cyp51) In
The X-Ray Structure Of The Complex
pdb|2W09|A Chain A, Cyp51 Of M. Tuberculosis Bound To An Inhibitor Cis-4-
Methyl-N-[(1s)-3-(Methylsulfanyl)-1-(Pyridin-4-
Ylcarbamoyl)propyl]cyclohexanecarboxamide
pdb|2W0B|A Chain A, Cyp51 Of M. Tuberculosis Bound To An Inhibitor 3-{[(4-
Methylphenyl)sulfonyl]amino}propyl Pyridin-4-Ylcarbamate
Length = 455
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/182 (21%), Positives = 80/182 (43%), Gaps = 7/182 (3%)
Query: 310 LTEQQISMLLWEPIIETSDTTLVTTEWAMYELAKDPMRQDRLFQKIQSV---CRSNKFTE 366
+ +I+ + + T+ T W + EL + + ++ + RS F
Sbjct: 241 FSADEITGMFISMMFAGHHTSSGTASWTLIELMRHRDAYAAVIDELDELYGDGRSVSF-- 298
Query: 367 ENIAQVPYLGAVFHETLRKYSPAPIVPLRFAHEDTEIGGYFIPAGSEIAINIYGCNMDKK 426
+ Q+P L V ETLR + P I+ +R A + E+ G+ I G +A + N +
Sbjct: 299 HALRQIPQLENVLKETLRLHPPL-IILMRVAKGEFEVQGHRIHEGDLVAASPAISNRIPE 357
Query: 427 QWENPDEWKPERFLD-GQYDPADLYKTMAFGTGKRVCAGSLQASLIACTAIGRLVQEFKW 485
+ +P ++ P R+ Q D + + + FG G+ C G+ A + L++E+++
Sbjct: 358 DFPDPHDFVPARYEQPRQEDLLNRWTWIPFGAGRHRCVGAAFAIMQIKAIFSVLLREYEF 417
Query: 486 NL 487
+
Sbjct: 418 EM 419
>pdb|1U13|A Chain A, Crystal Structure Analysis Of The C37lC151TC442A-Triple
Mutant Of Cyp51 From Mycobacterium Tuberculosis
Length = 455
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/182 (21%), Positives = 80/182 (43%), Gaps = 7/182 (3%)
Query: 310 LTEQQISMLLWEPIIETSDTTLVTTEWAMYELAKDPMRQDRLFQKIQSV---CRSNKFTE 366
+ +I+ + + T+ T W + EL + + ++ + RS F
Sbjct: 241 FSADEITGMFISMMFAGHHTSSGTASWTLIELMRHRDAYAAVIDELDELYGDGRSVSF-- 298
Query: 367 ENIAQVPYLGAVFHETLRKYSPAPIVPLRFAHEDTEIGGYFIPAGSEIAINIYGCNMDKK 426
+ Q+P L V ETLR + P I+ +R A + E+ G+ I G +A + N +
Sbjct: 299 HALRQIPQLENVLKETLRLHPPL-IILMRVAKGEFEVQGHRIHEGDLVAASPAISNRIPE 357
Query: 427 QWENPDEWKPERFLD-GQYDPADLYKTMAFGTGKRVCAGSLQASLIACTAIGRLVQEFKW 485
+ +P ++ P R+ Q D + + + FG G+ C G+ A + L++E+++
Sbjct: 358 DFPDPHDFVPARYEQPRQEDLLNRWTWIPFGAGRHRCVGAAFAIMQIKAIFSVLLREYEF 417
Query: 486 NL 487
+
Sbjct: 418 EM 419
>pdb|3TIK|A Chain A, Sterol 14-Alpha Demethylase (Cyp51) From Trypanosoma
Brucei In Complex With The Tipifarnib Derivative
6-((4-Chlorophenyl)(Methoxy)(1-Methyl-
1h-Imidazol-5-Yl)methyl)-4-(2,
6-Difluorophenyl)-1-Methylquinolin- 2(1h)-One
pdb|3TIK|B Chain B, Sterol 14-Alpha Demethylase (Cyp51) From Trypanosoma
Brucei In Complex With The Tipifarnib Derivative
6-((4-Chlorophenyl)(Methoxy)(1-Methyl-
1h-Imidazol-5-Yl)methyl)-4-(2,
6-Difluorophenyl)-1-Methylquinolin- 2(1h)-One
pdb|3TIK|C Chain C, Sterol 14-Alpha Demethylase (Cyp51) From Trypanosoma
Brucei In Complex With The Tipifarnib Derivative
6-((4-Chlorophenyl)(Methoxy)(1-Methyl-
1h-Imidazol-5-Yl)methyl)-4-(2,
6-Difluorophenyl)-1-Methylquinolin- 2(1h)-One
pdb|3TIK|D Chain D, Sterol 14-Alpha Demethylase (Cyp51) From Trypanosoma
Brucei In Complex With The Tipifarnib Derivative
6-((4-Chlorophenyl)(Methoxy)(1-Methyl-
1h-Imidazol-5-Yl)methyl)-4-(2,
6-Difluorophenyl)-1-Methylquinolin- 2(1h)-One
Length = 454
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/212 (20%), Positives = 89/212 (41%), Gaps = 28/212 (13%)
Query: 280 DVLISEAKSRIASGQELNCYVDHLLSEV----KSLTEQQISMLLWEPIIETSDTTLVTTE 335
+++I+ + + + + LLS V ++ ++ ++ + T+ +TT
Sbjct: 215 EIIIARKEEEVNKDSSTSDLLSGLLSAVYRDGTPMSLHEVCGMIVAAMFAGQHTSSITTT 274
Query: 336 WAMYELAK-------DPMRQDRLFQKIQSVCRSNKFTEENIAQVPYLGAVFHETLRKYSP 388
W+M L + +R++ ++ + N +E +P+ E++R+ P
Sbjct: 275 WSMLHLMHPANVKHLEALRKE--IEEFPAQLNYNNVMDE----MPFAERCARESIRR-DP 327
Query: 389 APIVPLRFAHEDTEIGGYFIPAGSEIAINIYGCNMDKKQWENPDEWKPERFLDGQYDPAD 448
++ +R D ++G Y +P G IA + + D++ + P W PER D + + A
Sbjct: 328 PLLMLMRKVMADVKVGSYVVPKGDIIACSPLLSHHDEEAFPEPRRWDPER--DEKVEGA- 384
Query: 449 LYKTMAFGTGKRVCAGS----LQASLIACTAI 476
+ FG G C G LQ I TA
Sbjct: 385 ---FIGFGAGVHKCIGQKFGLLQVKTILATAF 413
>pdb|2WV2|A Chain A, X-Ray Structure Of Cyp51 From The Human Pathogen
Trypanosoma Brucei In Complex With Fluconazole
Length = 475
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/212 (20%), Positives = 89/212 (41%), Gaps = 28/212 (13%)
Query: 280 DVLISEAKSRIASGQELNCYVDHLLSEV----KSLTEQQISMLLWEPIIETSDTTLVTTE 335
+++I+ + + + + LLS V ++ ++ ++ + T+ +TT
Sbjct: 228 EIIIARKEEEVNKDSSTSDLLSGLLSAVYRDGTPMSLHEVCGMIVAAMFAGQHTSSITTT 287
Query: 336 WAMYELAK-------DPMRQDRLFQKIQSVCRSNKFTEENIAQVPYLGAVFHETLRKYSP 388
W+M L + +R++ ++ + N +E +P+ E++R+ P
Sbjct: 288 WSMLHLMHPANVKHLEALRKE--IEEFPAQLNYNNVMDE----MPFAERCARESIRR-DP 340
Query: 389 APIVPLRFAHEDTEIGGYFIPAGSEIAINIYGCNMDKKQWENPDEWKPERFLDGQYDPAD 448
++ +R D ++G Y +P G IA + + D++ + P W PER D + + A
Sbjct: 341 PLLMLMRKVMADVKVGSYVVPKGDIIACSPLLSHHDEEAFPEPRRWDPER--DEKVEGA- 397
Query: 449 LYKTMAFGTGKRVCAGS----LQASLIACTAI 476
+ FG G C G LQ I TA
Sbjct: 398 ---FIGFGAGVHKCIGQKFGLLQVKTILATAF 426
>pdb|3P99|A Chain A, Sterol 14alpha-Demethylase (Cyp51) From Trypanosoma Brucei
In Complex With
Delta7-14alpha-Methylene-Cyclopropyl-Dihydrolanosterol
pdb|3P99|B Chain B, Sterol 14alpha-Demethylase (Cyp51) From Trypanosoma Brucei
In Complex With
Delta7-14alpha-Methylene-Cyclopropyl-Dihydrolanosterol
pdb|3P99|C Chain C, Sterol 14alpha-Demethylase (Cyp51) From Trypanosoma Brucei
In Complex With
Delta7-14alpha-Methylene-Cyclopropyl-Dihydrolanosterol
pdb|3P99|D Chain D, Sterol 14alpha-Demethylase (Cyp51) From Trypanosoma Brucei
In Complex With
Delta7-14alpha-Methylene-Cyclopropyl-Dihydrolanosterol
Length = 453
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/212 (20%), Positives = 89/212 (41%), Gaps = 28/212 (13%)
Query: 280 DVLISEAKSRIASGQELNCYVDHLLSEV----KSLTEQQISMLLWEPIIETSDTTLVTTE 335
+++I+ + + + + LLS V ++ ++ ++ + T+ +TT
Sbjct: 214 EIIIARKEEEVNKDSSTSDLLSGLLSAVYRDGTPMSLHEVCGMIVAAMFAGQHTSSITTT 273
Query: 336 WAMYELAK-------DPMRQDRLFQKIQSVCRSNKFTEENIAQVPYLGAVFHETLRKYSP 388
W+M L + +R++ ++ + N +E +P+ E++R+ P
Sbjct: 274 WSMLHLMHPANVKHLEALRKE--IEEFPAQLNYNNVMDE----MPFAERCARESIRR-DP 326
Query: 389 APIVPLRFAHEDTEIGGYFIPAGSEIAINIYGCNMDKKQWENPDEWKPERFLDGQYDPAD 448
++ +R D ++G Y +P G IA + + D++ + P W PER D + + A
Sbjct: 327 PLLMLMRKVMADVKVGSYVVPKGDIIACSPLLSHHDEEAFPEPRRWDPER--DEKVEGA- 383
Query: 449 LYKTMAFGTGKRVCAGS----LQASLIACTAI 476
+ FG G C G LQ I TA
Sbjct: 384 ---FIGFGAGVHKCIGQKFGLLQVKTILATAF 412
>pdb|2X2N|A Chain A, X-Ray Structure Of Cyp51 From Trypanosoma Brucei In
Complex With Posaconazole In Two Different Conformations
pdb|2X2N|B Chain B, X-Ray Structure Of Cyp51 From Trypanosoma Brucei In
Complex With Posaconazole In Two Different Conformations
pdb|2X2N|C Chain C, X-Ray Structure Of Cyp51 From Trypanosoma Brucei In
Complex With Posaconazole In Two Different Conformations
pdb|2X2N|D Chain D, X-Ray Structure Of Cyp51 From Trypanosoma Brucei In
Complex With Posaconazole In Two Different Conformations
Length = 475
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/212 (20%), Positives = 89/212 (41%), Gaps = 28/212 (13%)
Query: 280 DVLISEAKSRIASGQELNCYVDHLLSEV----KSLTEQQISMLLWEPIIETSDTTLVTTE 335
+++I+ + + + + LLS V ++ ++ ++ + T+ +TT
Sbjct: 228 EIIIARKAAAVNKDSSTSDLLSGLLSAVYRDGTPMSLHEVCGMIVAAMFAGQHTSSITTT 287
Query: 336 WAMYELAK-------DPMRQDRLFQKIQSVCRSNKFTEENIAQVPYLGAVFHETLRKYSP 388
W+M L + +R++ ++ + N +E +P+ E++R+ P
Sbjct: 288 WSMLHLMHPANVKHLEALRKE--IEEFPAQLNYNNVMDE----MPFAERCARESIRR-DP 340
Query: 389 APIVPLRFAHEDTEIGGYFIPAGSEIAINIYGCNMDKKQWENPDEWKPERFLDGQYDPAD 448
++ +R D ++G Y +P G IA + + D++ + P W PER D + + A
Sbjct: 341 PLLMLMRKVMADVKVGSYVVPKGDIIACSPLLSHHDEEAFPEPRRWDPER--DEKVEGA- 397
Query: 449 LYKTMAFGTGKRVCAGS----LQASLIACTAI 476
+ FG G C G LQ I TA
Sbjct: 398 ---FIGFGAGVHKCIGQKFGLLQVKTILATAF 426
>pdb|2Z3T|A Chain A, Crystal Structure Of Substrate Free Cytochrome P450 Stap
(cyp245a1)
pdb|2Z3T|B Chain B, Crystal Structure Of Substrate Free Cytochrome P450 Stap
(cyp245a1)
pdb|2Z3T|C Chain C, Crystal Structure Of Substrate Free Cytochrome P450 Stap
(cyp245a1)
pdb|2Z3T|D Chain D, Crystal Structure Of Substrate Free Cytochrome P450 Stap
(cyp245a1)
pdb|2Z3U|A Chain A, Crystal Structure Of Chromopyrrolic Acid Bound Cytochrome
P450 Stap (Cyp245a1)
pdb|3A1L|A Chain A, Crystal Structure Of 11,11'-Dichlorochromopyrrolic Acid
Bound Cytochrome P450 Stap (Cyp245a1)
Length = 425
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/115 (26%), Positives = 48/115 (41%), Gaps = 19/115 (16%)
Query: 381 ETLRKYSPAPIVPLRFAHEDTEIGGYFIPAGSEIAINIYGCNMDKKQWENPDEWKPERFL 440
E L +Y P R+A+ED +G + IP GS + + N D ++ +PD R
Sbjct: 292 EELMRYDPPVQAVTRWAYEDIRLGDHDIPRGSRVVALLGSANRDPARFPDPDVLDVHRAA 351
Query: 441 DGQYDPADLYKTMAFGTGKRVCAGS----------LQASLIACTAIGRLVQEFKW 485
+ Q + FG G C G+ L+A L A+GR E ++
Sbjct: 352 ERQ---------VGFGLGIHYCLGATLARAEAEIGLRALLDGIPALGRGAHEVEY 397
>pdb|1EGY|A Chain A, Cytochrome P450eryf With 9-Aminophenanthrene Bound
pdb|1EUP|A Chain A, X-Ray Crystal Structure Of Cytochrome P450eryf With
Androstendione Bound
pdb|1JIN|A Chain A, P450eryfKETOCONAZOLE
pdb|1OXA|A Chain A, Cytochrome P450 (Donor:o2 Oxidoreductase)
Length = 403
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 42/103 (40%), Gaps = 10/103 (9%)
Query: 381 ETLRKYSPAPIVPLRFAHEDTEIGGYFIPAGSEIAINIYGCNMDKKQWENPDEWKPERFL 440
E LR +P P RFA E+ EIGG IP S + + N D Q+ +P + R
Sbjct: 279 EILRYIAP-PETTTRFAAEEVEIGGVAIPQYSTVLVANGAANRDPSQFPDPHRFDVTR-- 335
Query: 441 DGQYDPADLYKTMAFGTGKRVCAGSLQASLIACTAIGRLVQEF 483
D ++FG G C G A L A+ L F
Sbjct: 336 -------DTRGHLSFGQGIHFCMGRPLAKLEGEVALRALFGRF 371
>pdb|3ABB|A Chain A, Crystal Structure Of Cyp105d6
Length = 408
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 43/174 (24%), Positives = 66/174 (37%), Gaps = 27/174 (15%)
Query: 306 EVKSLTEQQISMLLWEPIIETSDTTLVTTEWAMYELAKDPMRQDRLFQKIQSVCRSNKFT 365
E L ++ M+ ++ +TT+ L + P + D L + +V
Sbjct: 224 EEGDLDHDEVVMIALVLLVAGHETTVNAIALGALTLIQHPEQIDVLLRDPGAVS------ 277
Query: 366 EENIAQVPYLGAVFHETLRKYSPAPIVPLRFAHEDTEIGGYFIPAGSEIAINIYGCNMDK 425
V E LR S + + +R A ED E+GG I AG + ++I N D
Sbjct: 278 -----------GVVEELLRFTSVSDHI-VRMAKEDIEVGGATIKAGDAVLVSITLMNRDA 325
Query: 426 KQWENPDEWKPERFLDGQYDPADLYKTMAFGTGKRVCAGSLQASLIACTAIGRL 479
K +ENPD + R + + FG G C G A A+G L
Sbjct: 326 KAYENPDIFDARR---------NARHHVGFGHGIHQCLGQNLARAELEIALGGL 370
>pdb|1EHE|A Chain A, Crystal Structures Of Cytochrome P450nor And Its Mutants
(Ser286 Val, Thr) In The Ferric Resting State At
Cryogenic Temperature: A Comparative Analysis With
Monooxygenase Cytochrome P450s
pdb|1GEI|A Chain A, Structural Characterization Of N-Butyl-Isocyanide
Complexes Of Cytochromes P450nor And P450cam
pdb|1GED|A Chain A, A Positive Charge Route For The Access Of Nadh To Heme
Formed In The Distal Heme Pocket Of Cytochrome P450nor
pdb|1GEJ|A Chain A, Structural Characterization Of N-Butyl-Isocyanide
Complexes Of Cytochromes P450nor And P450cam
pdb|1ROM|A Chain A, Crystal Structure Of Nitric Reductase From Denitrifying
Fungus Fusarium Oxysporum
pdb|2ROM|A Chain A, Crystal Structure Of Nitric Reductase From Denitrifying
Fungus Fusarium Oxysporum Complex With Carbon Monoxide
Length = 403
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 34/112 (30%), Positives = 47/112 (41%), Gaps = 8/112 (7%)
Query: 373 PYLGAVFHETLRKYSPAPIVPL-RFAHEDTEIGGYFIPAGSEIAINIYGCNMDKKQWENP 431
P L F E L +Y A + + R A ED IG + A I + N D++ +ENP
Sbjct: 269 PSLAPQFVEELCRYHTASALAIKRTAKEDVMIGDKLVRANEGIIASNQSANRDEEVFENP 328
Query: 432 DEWKPERFLDGQYDPADLYKTMAFGTGKRVCAGSLQASLIACTAIGRLVQEF 483
DE+ R ++ P D + FG G C A T L Q+F
Sbjct: 329 DEFNMNR----KWPPQD---PLGFGFGDHRCIAEHLAKAELTTVFSTLYQKF 373
>pdb|1F26|A Chain A, Crystal Structure Of No Complex Of Thr243val Mutants Of
Cytochrome P450nor
Length = 402
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 34/112 (30%), Positives = 47/112 (41%), Gaps = 8/112 (7%)
Query: 373 PYLGAVFHETLRKYSPAPIVPL-RFAHEDTEIGGYFIPAGSEIAINIYGCNMDKKQWENP 431
P L F E L +Y A + + R A ED IG + A I + N D++ +ENP
Sbjct: 268 PSLAPQFVEELCRYHTASALAIKRTAKEDVMIGDKLVRANEGIIASNQSANRDEEVFENP 327
Query: 432 DEWKPERFLDGQYDPADLYKTMAFGTGKRVCAGSLQASLIACTAIGRLVQEF 483
DE+ R ++ P D + FG G C A T L Q+F
Sbjct: 328 DEFNMNR----KWPPQD---PLGFGFGDHRCIAEHLAKAELTTVFSTLYQKF 372
>pdb|1IZO|A Chain A, Cytochrome P450 Bs Beta Complexed With Fatty Acid
pdb|1IZO|B Chain B, Cytochrome P450 Bs Beta Complexed With Fatty Acid
pdb|1IZO|C Chain C, Cytochrome P450 Bs Beta Complexed With Fatty Acid
pdb|2ZQX|A Chain A, Cytochrome P450bsbeta Cocrystallized With Heptanoic Acid
pdb|2ZQX|B Chain B, Cytochrome P450bsbeta Cocrystallized With Heptanoic Acid
pdb|2ZQX|C Chain C, Cytochrome P450bsbeta Cocrystallized With Heptanoic Acid
pdb|2ZQJ|A Chain A, Substrate-Free Form Of Cytochrome P450bsbeta
pdb|2ZQJ|B Chain B, Substrate-Free Form Of Cytochrome P450bsbeta
pdb|2ZQJ|C Chain C, Substrate-Free Form Of Cytochrome P450bsbeta
Length = 417
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 47/196 (23%), Positives = 85/196 (43%), Gaps = 41/196 (20%)
Query: 267 KIQRLCTRRQAVMDVLISEAKS---RIASGQELNCYVDHLLSEVKSLTEQQISMLL---W 320
K +R R + ++V+I +A++ + SG L+ H + L + ++ L
Sbjct: 182 KGRRARPRAEEWIEVMIEDARAGLLKTTSGTALHEMAFHTQEDGSQLDSRMAAIELINVL 241
Query: 321 EPIIETSDTTLVTTEWAMYE-------LAKDPMRQDRLFQKIQSVCRSNKFTEENIAQVP 373
PI+ S LV + A++E L R+ +F +Q V R F P
Sbjct: 242 RPIVAIS-YFLVFSALALHEHPKYKEWLRSGNSREREMF--VQEVRRYYPFG-------P 291
Query: 374 YLGAVFHETLRKYSPAPIVPLRFAHEDTEIGGYFIPAGSEIAINIYGCNMDKKQWENPDE 433
+LGA +V F + E G+ + +++YG N D + W++PDE
Sbjct: 292 FLGA-------------LVKKDFVWNNCEF-----KKGTSVLLDLYGTNHDPRLWDHPDE 333
Query: 434 WKPERFLDGQYDPADL 449
++PERF + + + D+
Sbjct: 334 FRPERFAEREENLFDM 349
>pdb|1JFB|A Chain A, X-Ray Structure Of Nitric Oxide Reductase (Cytochrome
P450nor) In The Ferric Resting State At Atomic
Resolution
pdb|1JFC|A Chain A, X-ray Structure Of Nitric Oxide Reductase (cytochrome
P450nor) In The Ferrous Co State At Atomic Resolution
Length = 404
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 34/112 (30%), Positives = 47/112 (41%), Gaps = 8/112 (7%)
Query: 373 PYLGAVFHETLRKYSPAPIVPL-RFAHEDTEIGGYFIPAGSEIAINIYGCNMDKKQWENP 431
P L F E L +Y A + + R A ED IG + A I + N D++ +ENP
Sbjct: 270 PSLAPQFVEELCRYHTASALAIKRTAKEDVMIGDKLVRANEGIIASNQSANRDEEVFENP 329
Query: 432 DEWKPERFLDGQYDPADLYKTMAFGTGKRVCAGSLQASLIACTAIGRLVQEF 483
DE+ R ++ P D + FG G C A T L Q+F
Sbjct: 330 DEFNMNR----KWPPQD---PLGFGFGDHRCIAEHLAKAELTTVFSTLYQKF 374
>pdb|1CL6|A Chain A, Crystal Structures Of Ferric-No Complexes Of Fungal Nitric
Oxide Reductase And Its Ser286 Mutants At Cryogenic
Temperature
Length = 402
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 34/112 (30%), Positives = 47/112 (41%), Gaps = 8/112 (7%)
Query: 373 PYLGAVFHETLRKYSPAPIVPL-RFAHEDTEIGGYFIPAGSEIAINIYGCNMDKKQWENP 431
P L F E L +Y A + + R A ED IG + A I + N D++ +ENP
Sbjct: 268 PSLAPQFVEELCRYHTASALAIKRTAKEDVMIGDKLVRANEGIIASNQSANRDEEVFENP 327
Query: 432 DEWKPERFLDGQYDPADLYKTMAFGTGKRVCAGSLQASLIACTAIGRLVQEF 483
DE+ R ++ P D + FG G C A T L Q+F
Sbjct: 328 DEFNMNR----KWPPQD---PLGFGFGDHRCIAEHLAKAELTTVFSTLYQKF 372
>pdb|1F25|A Chain A, Crystal Structure Of No Complex Of Thr243asn Mutants Of
Cytochrome P450nor
Length = 402
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 34/112 (30%), Positives = 47/112 (41%), Gaps = 8/112 (7%)
Query: 373 PYLGAVFHETLRKYSPAPIVPL-RFAHEDTEIGGYFIPAGSEIAINIYGCNMDKKQWENP 431
P L F E L +Y A + + R A ED IG + A I + N D++ +ENP
Sbjct: 268 PSLAPQFVEELCRYHTASALAIKRTAKEDVMIGDKLVRANEGIIASNQSANRDEEVFENP 327
Query: 432 DEWKPERFLDGQYDPADLYKTMAFGTGKRVCAGSLQASLIACTAIGRLVQEF 483
DE+ R ++ P D + FG G C A T L Q+F
Sbjct: 328 DEFNMNR----KWPPQD---PLGFGFGDHRCIAEHLAKAELTTVFSTLYQKF 372
>pdb|1F24|A Chain A, Crystal Structure Of No Complex Of Thr243ala Mutants Of
Cytochrome P450nor
Length = 402
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 34/112 (30%), Positives = 47/112 (41%), Gaps = 8/112 (7%)
Query: 373 PYLGAVFHETLRKYSPAPIVPL-RFAHEDTEIGGYFIPAGSEIAINIYGCNMDKKQWENP 431
P L F E L +Y A + + R A ED IG + A I + N D++ +ENP
Sbjct: 268 PSLAPQFVEELCRYHTASALAIKRTAKEDVMIGDKLVRANEGIIASNQSANRDEEVFENP 327
Query: 432 DEWKPERFLDGQYDPADLYKTMAFGTGKRVCAGSLQASLIACTAIGRLVQEF 483
DE+ R ++ P D + FG G C A T L Q+F
Sbjct: 328 DEFNMNR----KWPPQD---PLGFGFGDHRCIAEHLAKAELTTVFSTLYQKF 372
>pdb|1CMJ|A Chain A, Crystal Structures Of Ferric-No Complexes Of Fungal Nitric
Oxide Reductase And Their Ser286 Mutants At Cryogenic
Temperature
Length = 402
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 34/112 (30%), Positives = 47/112 (41%), Gaps = 8/112 (7%)
Query: 373 PYLGAVFHETLRKYSPAPIVPL-RFAHEDTEIGGYFIPAGSEIAINIYGCNMDKKQWENP 431
P L F E L +Y A + + R A ED IG + A I + N D++ +ENP
Sbjct: 268 PSLAPQFVEELCRYHTATALAIKRTAKEDVMIGDKLVRANEGIIASNQSANRDEEVFENP 327
Query: 432 DEWKPERFLDGQYDPADLYKTMAFGTGKRVCAGSLQASLIACTAIGRLVQEF 483
DE+ R ++ P D + FG G C A T L Q+F
Sbjct: 328 DEFNMNR----KWPPQD---PLGFGFGDHRCIAEHLAKAELTTVFSTLYQKF 372
>pdb|1EHF|A Chain A, Crystal Structures Of Cytochrome P450nor And Its Mutants
(Ser286 Val, Thr) In The Ferric Resting State At
Cryogenic Temperature: A Comparative Analysis With
Monooxygenase Cytochrome P450s
Length = 403
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 34/112 (30%), Positives = 47/112 (41%), Gaps = 8/112 (7%)
Query: 373 PYLGAVFHETLRKYSPAPIVPL-RFAHEDTEIGGYFIPAGSEIAINIYGCNMDKKQWENP 431
P L F E L +Y A + + R A ED IG + A I + N D++ +ENP
Sbjct: 269 PSLAPQFVEELCRYHTATALAIKRTAKEDVMIGDKLVRANEGIIASNQSANRDEEVFENP 328
Query: 432 DEWKPERFLDGQYDPADLYKTMAFGTGKRVCAGSLQASLIACTAIGRLVQEF 483
DE+ R ++ P D + FG G C A T L Q+F
Sbjct: 329 DEFNMNR----KWPPQD---PLGFGFGDHRCIAEHLAKAELTTVFSTLYQKF 373
>pdb|1XQD|A Chain A, Crystal Structure Of P450nor Complexed With 3-
Pyridinealdehyde Adenine Dinucleotide
Length = 403
Score = 42.4 bits (98), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 34/112 (30%), Positives = 47/112 (41%), Gaps = 8/112 (7%)
Query: 373 PYLGAVFHETLRKYSPAPIVPL-RFAHEDTEIGGYFIPAGSEIAINIYGCNMDKKQWENP 431
P L F E L +Y A + + R A ED IG + A I + N D++ +ENP
Sbjct: 269 PSLAPQFVEELCRYHTASALAIKRTAKEDVMIGDKLVRANEGIIASNQSANRDEEVFENP 328
Query: 432 DEWKPERFLDGQYDPADLYKTMAFGTGKRVCAGSLQASLIACTAIGRLVQEF 483
DE+ R ++ P D + FG G C A T L Q+F
Sbjct: 329 DEFNMNR----KWPPQD---PLGFGFGDHRCIAEHLAKAELTTVFSTLYQKF 373
>pdb|1ULW|A Chain A, Crystal Structure Of P450nor Ser73gly/ser75gly Mutant
Length = 402
Score = 42.0 bits (97), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 34/112 (30%), Positives = 47/112 (41%), Gaps = 8/112 (7%)
Query: 373 PYLGAVFHETLRKYSPAPIVPL-RFAHEDTEIGGYFIPAGSEIAINIYGCNMDKKQWENP 431
P L F E L +Y A + + R A ED IG + A I + N D++ +ENP
Sbjct: 268 PSLAPQFVEELCRYHTASALAIKRTAKEDVMIGDKLVRANEGIIASNQSANRDEEVFENP 327
Query: 432 DEWKPERFLDGQYDPADLYKTMAFGTGKRVCAGSLQASLIACTAIGRLVQEF 483
DE+ R ++ P D + FG G C A T L Q+F
Sbjct: 328 DEFNMNR----KWPPQD---PLGFGFGDHRCIAEHLAKAELTTVFSTLYQKF 372
>pdb|1EHG|A Chain A, Crystal Structures Of Cytochrome P450nor And Its Mutants
(Ser286 Val, Thr) In The Ferric Resting State At
Cryogenic Temperature: A Comparative Analysis With
Monooxygenase Cytochrome P450s
Length = 403
Score = 42.0 bits (97), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 34/112 (30%), Positives = 47/112 (41%), Gaps = 8/112 (7%)
Query: 373 PYLGAVFHETLRKYSPAPIVPL-RFAHEDTEIGGYFIPAGSEIAINIYGCNMDKKQWENP 431
P L F E L +Y A + + R A ED IG + A I + N D++ +ENP
Sbjct: 269 PSLAPQFVEELCRYHTAVALAIKRTAKEDVMIGDKLVRANEGIIASNQSANRDEEVFENP 328
Query: 432 DEWKPERFLDGQYDPADLYKTMAFGTGKRVCAGSLQASLIACTAIGRLVQEF 483
DE+ R ++ P D + FG G C A T L Q+F
Sbjct: 329 DEFNMNR----KWPPQD---PLGFGFGDHRCIAEHLAKAELTTVFSTLYQKF 373
>pdb|1CMN|A Chain A, Crystal Structures Of Ferric-No Complexes Of Fungal Nitric
Oxide Reductase And Their Ser286 Mutants At Cryogenic
Temperature
Length = 402
Score = 42.0 bits (97), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 34/112 (30%), Positives = 47/112 (41%), Gaps = 8/112 (7%)
Query: 373 PYLGAVFHETLRKYSPAPIVPL-RFAHEDTEIGGYFIPAGSEIAINIYGCNMDKKQWENP 431
P L F E L +Y A + + R A ED IG + A I + N D++ +ENP
Sbjct: 268 PSLAPQFVEELCRYHTAVALAIKRTAKEDVMIGDKLVRANEGIIASNQSANRDEEVFENP 327
Query: 432 DEWKPERFLDGQYDPADLYKTMAFGTGKRVCAGSLQASLIACTAIGRLVQEF 483
DE+ R ++ P D + FG G C A T L Q+F
Sbjct: 328 DEFNMNR----KWPPQD---PLGFGFGDHRCIAEHLAKAELTTVFSTLYQKF 372
>pdb|1N97|A Chain A, Crystal Stucture Of Cyp175a1 From Thermus Thermophillus
Strain Hb27
pdb|1N97|B Chain B, Crystal Stucture Of Cyp175a1 From Thermus Thermophillus
Strain Hb27
Length = 389
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 50/106 (47%), Gaps = 5/106 (4%)
Query: 379 FHETLRKYSPAPIVPLRFAHEDTEIGGYFIPAGSEIAINIYGCNMDKKQWENPDEWKPER 438
F E LR Y PA I+ R +G +P G+ + ++ Y + + + + ++PER
Sbjct: 258 FQEALRLYPPAWILTRRL-ERPLLLGEDRLPPGTTLVLSPYVTQ--RLHFPDGEAFRPER 314
Query: 439 FLDGQYDPADLYKTMAFGTGKRVCAGSLQASLIACTAIGRLVQEFK 484
FL+ + P+ Y FG G+R+C G A L + + F+
Sbjct: 315 FLEERGTPSGRY--FPFGLGQRLCLGRDFALLEGPIVLRAFFRRFR 358
>pdb|2JJN|A Chain A, Structure Of Closed Cytochrome P450 Eryk
pdb|2JJO|A Chain A, Structure Of Cytochrome P450 Eryk In Complex With Its
Natural Substrate Erd
pdb|2JJP|A Chain A, Structure Of Cytochrome P450 Eryk In Complex With
Inhibitor Ketoconazole (Kc)
pdb|2XFH|A Chain A, Structure Of Cytochrome P450 Eryk Cocrystallized With
Inhibitor Clotrimazole
Length = 411
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/117 (26%), Positives = 49/117 (41%), Gaps = 11/117 (9%)
Query: 367 ENIAQVPYLGAVFHETLRKYSPAPIVPLRFAHEDTEIGGYFIPAGSEIAINIYGCNMDKK 426
E+ ++P A+ E LR P P + R + TE+ G IPA + + N D
Sbjct: 269 EDPGRIP---AIVEEVLRYRPPFPQM-QRTTTKATEVAGVPIPADVMVNTWVLSANRDSD 324
Query: 427 QWENPDEWKPERFLDGQYDPADLYKTMAFGTGKRVCAGSLQASLIACTAIGRLVQEF 483
++PD + P R G ++FG G C G+ A L A+ ++ F
Sbjct: 325 AHDDPDRFDPSRKSGGA-------AQLSFGHGVHFCLGAPLARLENRVALEEIIARF 374
>pdb|2VRV|A Chain A, Structure Of Histidine Tagged Cytochrome P450 Eryk In
Complex With Inhibitor Clotrimazole (Clt)
pdb|2WIO|A Chain A, Structure Of The Histidine Tagged, Open Cytochrome P450
Eryk From S. Erythraea
Length = 431
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/117 (26%), Positives = 49/117 (41%), Gaps = 11/117 (9%)
Query: 367 ENIAQVPYLGAVFHETLRKYSPAPIVPLRFAHEDTEIGGYFIPAGSEIAINIYGCNMDKK 426
E+ ++P A+ E LR P P + R + TE+ G IPA + + N D
Sbjct: 289 EDPGRIP---AIVEEVLRYRPPFPQM-QRTTTKATEVAGVPIPADVMVNTWVLSANRDSD 344
Query: 427 QWENPDEWKPERFLDGQYDPADLYKTMAFGTGKRVCAGSLQASLIACTAIGRLVQEF 483
++PD + P R G ++FG G C G+ A L A+ ++ F
Sbjct: 345 AHDDPDRFDPSRKSGGA-------AQLSFGHGVHFCLGAPLARLENRVALEEIIARF 394
>pdb|1UE8|A Chain A, Crystal Structure Of Thermophilic Cytochrome P450 From
Sulfolobus Tokodaii
pdb|3B4X|A Chain A, Crystal Structure Analysis Of Sulfolobus Tokodaii Strain7
Cytochrom P450
Length = 367
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/105 (25%), Positives = 50/105 (47%), Gaps = 10/105 (9%)
Query: 380 HETLRKYSPAPIVPLRFAHEDTEIGGYFIPAGSEIAINIYGCNMDKKQWENPDEWKPERF 439
E LR +SP + +R E +I I G + + I N D++ +++PD + P+R
Sbjct: 245 EEALR-FSPPVMRTIRVTKEKVKIRDQVIDEGELVRVWIASANRDEEVFKDPDSFIPDRT 303
Query: 440 LDGQYDPADLYKTMAFGTGKRVCAGSLQASLIACTAIGRLVQEFK 484
+ ++FG+G +C G+ A L A A+ ++F+
Sbjct: 304 PNPH---------LSFGSGIHLCLGAPLARLEARIALEEFAKKFR 339
>pdb|2Z36|A Chain A, Crystal Structure Of Cytochrome P450 Moxa From Nonomuraea
Recticatena (Cyp105)
pdb|2Z36|B Chain B, Crystal Structure Of Cytochrome P450 Moxa From Nonomuraea
Recticatena (Cyp105)
Length = 413
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 37/84 (44%), Gaps = 9/84 (10%)
Query: 381 ETLRKYSPAPIVPLRFAHEDTEIGGYFIPAGSEIAINIYGCNMDKKQWENPDEWKPERFL 440
E LR ++ A V R A ED EIGG I AG + +++ N D +++P ER
Sbjct: 284 ELLRYFTIADGVTSRLATEDVEIGGVSIKAGEGVIVSMLSANWDPAVFKDPAVLDVER-- 341
Query: 441 DGQYDPADLYKTMAFGTGKRVCAG 464
+AFG G C G
Sbjct: 342 -------GARHHLAFGFGPHQCLG 358
>pdb|3SN5|A Chain A, Crystal Structure Of Human Cyp7a1 In Complex With
Cholest-4-En-3-One
pdb|3SN5|B Chain B, Crystal Structure Of Human Cyp7a1 In Complex With
Cholest-4-En-3-One
pdb|3V8D|A Chain A, Crystal Structure Of Human Cyp7a1 In Complex With
7-Ketocholesterol
pdb|3V8D|B Chain B, Crystal Structure Of Human Cyp7a1 In Complex With
7-Ketocholesterol
Length = 491
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 63/291 (21%), Positives = 119/291 (40%), Gaps = 55/291 (18%)
Query: 214 VVESIYVKELGSTLSKDEVFKILVLDIMEGAIEVDWRDFFPYLRWVPNKGVEMKIQRLC- 272
+ E+ Y+ G L++ + K +L+ ++ + D FP L G+ + + R
Sbjct: 162 MFEAGYLTIFGRDLTRRDTQKAHILNNLDNFKQFD--KVFPALV----AGLPIHMFRTAH 215
Query: 273 TRRQAVMDVLISEAKSRIASGQEL---NCYVDHLLSEVKSLTEQQISML-LWEPIIETSD 328
R+ + + L E + S EL +++ LS L + + ++ LW +
Sbjct: 216 NAREKLAESLRHENLQKRESISELISLRMFLNDTLSTFDDLEKAKTHLVVLWA----SQA 271
Query: 329 TTLVTTEWAMYELAKDPMRQDRLFQKIQSVCRSNKFTEENIAQ----------------- 371
T+ T W+++++ ++P + +++ K T EN Q
Sbjct: 272 NTIPATFWSLFQMIRNP-------EAMKAATEEVKRTLENAGQKVSLEGNPICLSQAELN 324
Query: 372 -VPYLGAVFHETLRKYSPAPIVPLRFAHED----TEIGGYFIPAGSEIAINIYGCNMDKK 426
+P L ++ E+LR S + + +R A ED E G Y I IA+ ++D +
Sbjct: 325 DLPVLDSIIKESLRLSSAS--LNIRTAKEDFTLHLEDGSYNIRKDDIIALYPQLMHLDPE 382
Query: 427 QWENPDEWKPERFLDGQYDPADL---------YKTMAFGTGKRVCAGSLQA 468
+ +P +K +R+LD Y M FG+G +C G L A
Sbjct: 383 IYPDPLTFKYDRYLDENGKTKTTFYCNGLKLKYYYMPFGSGATICPGRLFA 433
>pdb|3DAX|A Chain A, Crystal Structure Of Human Cyp7a1
pdb|3DAX|B Chain B, Crystal Structure Of Human Cyp7a1
Length = 491
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 63/291 (21%), Positives = 119/291 (40%), Gaps = 55/291 (18%)
Query: 214 VVESIYVKELGSTLSKDEVFKILVLDIMEGAIEVDWRDFFPYLRWVPNKGVEMKIQRLC- 272
+ E+ Y+ G L++ + K +L+ ++ + D FP L G+ + + R
Sbjct: 162 MFEAGYLTIFGRDLTRRDTQKAHILNNLDNFKQFD--KVFPALV----AGLPIHMFRTAH 215
Query: 273 TRRQAVMDVLISEAKSRIASGQEL---NCYVDHLLSEVKSLTEQQISML-LWEPIIETSD 328
R+ + + L E + S EL +++ LS L + + ++ LW +
Sbjct: 216 NAREKLAESLRHENLQKRESISELISLRMFLNDTLSTFDDLEKAKTHLVVLWA----SQA 271
Query: 329 TTLVTTEWAMYELAKDPMRQDRLFQKIQSVCRSNKFTEENIAQ----------------- 371
T+ T W+++++ ++P + +++ K T EN Q
Sbjct: 272 NTIPATFWSLFQMIRNP-------EAMKAATEEVKRTLENAGQKVSLEGNPICLSQAELN 324
Query: 372 -VPYLGAVFHETLRKYSPAPIVPLRFAHED----TEIGGYFIPAGSEIAINIYGCNMDKK 426
+P L ++ E+LR S + + +R A ED E G Y I IA+ ++D +
Sbjct: 325 DLPVLDSIIKESLRLSSAS--LNIRTAKEDFTLHLEDGSYNIRKDDIIALYPQLMHLDPE 382
Query: 427 QWENPDEWKPERFLDGQYDPADL---------YKTMAFGTGKRVCAGSLQA 468
+ +P +K +R+LD Y M FG+G +C G L A
Sbjct: 383 IYPDPLTFKYDRYLDENGKTKTTFYCNGLKLKYYYMPFGSGATICPGRLFA 433
>pdb|1IO8|A Chain A, Thermophilic Cytochrome P450 (Cyp119) From Sulfolobus
Solfataricus: High Resolution Structural Origin Of Its
Thermostability And Functional Properties
pdb|1IO8|B Chain B, Thermophilic Cytochrome P450 (Cyp119) From Sulfolobus
Solfataricus: High Resolution Structural Origin Of Its
Thermostability And Functional Properties
Length = 368
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/122 (27%), Positives = 59/122 (48%), Gaps = 15/122 (12%)
Query: 363 KFTEENIAQVPYLGAVFHETLRKYSPAPIVPLRFAHEDTEIGGYFIPAGSEIAINIYGCN 422
+ EEN+ YL A+ E LR YSP + +R E ++G I G + + I N
Sbjct: 233 RIREENL----YLKAI-EEALR-YSPPVMRTVRKTKERVKLGDQTIEEGEYVRVWIASAN 286
Query: 423 MDKKQWENPDEWKPERFLDGQYDPADLYKTMAFGTGKRVCAGSLQASLIACTAIGRLVQE 482
D++ + + +++ P+R +P ++FG+G +C G+ A L A AI +
Sbjct: 287 RDEEVFHDGEKFIPDR------NPN---PHLSFGSGIHLCLGAPLARLEARIAIEEFSKR 337
Query: 483 FK 484
F+
Sbjct: 338 FR 339
>pdb|1F4T|A Chain A, Thermophilic P450: Cyp119 From Sulfolobus Solfactaricus
With 4- Phenylimidazole Bound
pdb|1F4T|B Chain B, Thermophilic P450: Cyp119 From Sulfolobus Solfactaricus
With 4- Phenylimidazole Bound
pdb|1F4U|A Chain A, Thermophilic P450: Cyp119 From Sulfolobus Solfactaricus
pdb|1F4U|B Chain B, Thermophilic P450: Cyp119 From Sulfolobus Solfactaricus
pdb|1IO9|A Chain A, Thermophilic Cytochrome P450 (cyp119) From Sulfolobus
Solfataricus: High Resolution Structural Origin Of Its
Thermostability And Functional Properties
pdb|1IO9|B Chain B, Thermophilic Cytochrome P450 (cyp119) From Sulfolobus
Solfataricus: High Resolution Structural Origin Of Its
Thermostability And Functional Properties
pdb|1IO7|A Chain A, Thermophilic Cytochrome P450 (Cyp119) From Sulfolobus
Solfataricus: High Resolution Structural Origin Of Its
Thermostability And Functional Properties
pdb|1IO7|B Chain B, Thermophilic Cytochrome P450 (Cyp119) From Sulfolobus
Solfataricus: High Resolution Structural Origin Of Its
Thermostability And Functional Properties
Length = 368
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/122 (27%), Positives = 59/122 (48%), Gaps = 15/122 (12%)
Query: 363 KFTEENIAQVPYLGAVFHETLRKYSPAPIVPLRFAHEDTEIGGYFIPAGSEIAINIYGCN 422
+ EEN+ YL A+ E LR YSP + +R E ++G I G + + I N
Sbjct: 233 RIREENL----YLKAI-EEALR-YSPPVMRTVRKTKERVKLGDQTIEEGEYVRVWIASAN 286
Query: 423 MDKKQWENPDEWKPERFLDGQYDPADLYKTMAFGTGKRVCAGSLQASLIACTAIGRLVQE 482
D++ + + +++ P+R +P ++FG+G +C G+ A L A AI +
Sbjct: 287 RDEEVFHDGEKFIPDR------NPN---PHLSFGSGIHLCLGAPLARLEARIAIEEFSKR 337
Query: 483 FK 484
F+
Sbjct: 338 FR 339
>pdb|3TKT|A Chain A, Crystal Structure Of Cyp108d1 From Novosphingobium
Aromaticivorans Dsm12444
Length = 450
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 41/90 (45%), Gaps = 10/90 (11%)
Query: 375 LGAVFHETLRKYSPAPIVPLRFAHEDTEIGGYFIPAGSEIAINIYGCNMDKKQWENPDEW 434
L + E +R +P +R A DTE+ G I AG + +N N D Q+ P ++
Sbjct: 322 LPGIVEEAIRWTTPVQHF-MRTAATDTELCGQKIAAGDWLMLNYVAANHDPAQFPEPRKF 380
Query: 435 KPERFLDGQYDPADLYKTMAFGTGKRVCAG 464
P R PA+ + +AFG G C G
Sbjct: 381 DPTR-------PAN--RHLAFGAGSHQCLG 401
>pdb|3MGX|A Chain A, Crystal Structure Of P450 Oxyd That Is Involved In The
Biosynthesis Of Vancomycin-Type Antibiotics
pdb|3MGX|B Chain B, Crystal Structure Of P450 Oxyd That Is Involved In The
Biosynthesis Of Vancomycin-Type Antibiotics
Length = 415
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 42/93 (45%), Gaps = 10/93 (10%)
Query: 378 VFHETLRKYSPAPIVPLRFAHEDTEIGGYFIPAGSEIAINIYGCNMDKKQWENPDEWKPE 437
V E LR SPA V LR D I G +P+G+ + + N D ++++PD + P
Sbjct: 290 VVEEVLRWTSPAMHV-LRVTTADVTINGRDLPSGTPVVAWLPAANRDPAEFDDPDTFLPG 348
Query: 438 RFLDGQYDPADLYKTMAFGTGKRVCAGSLQASL 470
R + + + FG G C GS A +
Sbjct: 349 RKPN---------RHITFGHGMHHCLGSALARI 372
>pdb|1CPT|A Chain A, Crystal Structure And Refinement Of Cytochrome P450-Terp
At 2.3 Angstroms Resolution
Length = 428
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 36/77 (46%), Gaps = 9/77 (11%)
Query: 394 LRFAHEDTEIGGYFIPAGSEIAINIYGCNMDKKQWENPDEWKPERFLDGQYDPADLYKTM 453
+R A DTE+ G I G I ++ N D++ + NPDE+ RF + + +
Sbjct: 318 MRTALADTEVRGQNIKRGDRIMLSYPSANRDEEVFSNPDEFDITRFPN---------RHL 368
Query: 454 AFGTGKRVCAGSLQASL 470
FG G +C G A L
Sbjct: 369 GFGWGAHMCLGQHLAKL 385
>pdb|1PKF|A Chain A, Crystal Structure Of Epothilone D-Bound Cytochrome
P450epok
Length = 419
Score = 38.9 bits (89), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 41/174 (23%), Positives = 69/174 (39%), Gaps = 26/174 (14%)
Query: 310 LTEQQISMLLWEPIIETSDTTLVTTEWAMYELAKDPMRQDRLFQKIQSVCRSNKFTEENI 369
L+ +++ L+ I +DTT+ +A+ L + P + ++ V
Sbjct: 239 LSTKELVALVGAIIAAGTDTTIYLIAFAVLNLLRSP-------EALELVK---------- 281
Query: 370 AQVPYLGAVFHETLRKYSPAPIVPLRFAHEDTEIGGYFIPAGSEIAINIYGCNMDKKQWE 429
A+ + E LR + I +RFA +D E G I G + + I D +
Sbjct: 282 AEPGLMRNALDEVLRFENILRIGTVRFARQDLEYCGASIKKGEMVFLLIPSALRDGTVFS 341
Query: 430 NPDEWKPERFLDGQYDPADLYKTMAFGTGKRVCAGSLQASLIACTAIGRLVQEF 483
PD + R D ++A+G G VC G A L A A+G + + F
Sbjct: 342 RPDVFDVRR---------DTSASLAYGRGPHVCPGVSLARLEAEIAVGTIFRRF 386
>pdb|3NC3|A Chain A, Cyp134a1 Structure With A Closed Substrate Binding Loop
pdb|3NC3|B Chain B, Cyp134a1 Structure With A Closed Substrate Binding Loop
pdb|3NC5|A Chain A, Cyp134a1 Structure With An Open Substrate Binding Loop
pdb|3NC5|B Chain B, Cyp134a1 Structure With An Open Substrate Binding Loop
pdb|3NC6|A Chain A, Cyp134a1 1-Phenylimidazole Bound Structure
pdb|3NC6|B Chain B, Cyp134a1 1-Phenylimidazole Bound Structure
pdb|3NC7|A Chain A, Cyp134a1 2-Phenylimidazole Bound Structure
pdb|3NC7|B Chain B, Cyp134a1 2-Phenylimidazole Bound Structure
Length = 441
Score = 38.9 bits (89), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 53/255 (20%), Positives = 98/255 (38%), Gaps = 27/255 (10%)
Query: 216 ESIYVKELGSTLSKDEVFKILVLDIMEGAIEVDWR----DFFPYLRWVPNKGVEMKIQRL 271
+S V + G T + +L LD + +W DF + P E + L
Sbjct: 160 KSDLVNDFGKTFAVCVTMDMLGLDKRDHEKISEWHSGVADFITSISQSP----EARAHSL 215
Query: 272 CTRRQAVMDVLISEAKSRIASGQELNCYVDHLLSEVKSLTEQQISMLLWEPIIETSDTTL 331
Q ++ + R+ G +L + E +L+++ I L+ ++ ++
Sbjct: 216 WCSEQLSQYLMPVIKERRVNPGSDLISILCTSEYEGMALSDKDILALILNVLLAATEPAD 275
Query: 332 VTTEWAMYELAKDPMRQDRLFQKIQSVCRSNKFTEENIAQVPYLGAVFHETLRKYSPAPI 391
T +Y L +P +++ V IA ETLR P +
Sbjct: 276 KTLALMIYHLLNNP-------EQMNDVLADRSLVPRAIA----------ETLRYKPPVQL 318
Query: 392 VPLRFAHEDTEIGGYFIPAGSEIAINIYGCNMDKKQWENPDEWKPER-FLDGQYDPADLY 450
+P + + +DT +GG I + + I N D + +E PD + R L + +
Sbjct: 319 IPRQLS-QDTVVGGMEIKKDTIVFCMIGAANRDPEAFEQPDVFNIHREDLGIKSAFSGAA 377
Query: 451 KTMAFGTGKRVCAGS 465
+ +AFG+G C G+
Sbjct: 378 RHLAFGSGIHNCVGT 392
>pdb|1Q5D|A Chain A, Epothilone B-Bound Cytochrome P450epok
pdb|1Q5E|A Chain A, Substrate-Free Cytochrome P450epok
Length = 419
Score = 38.5 bits (88), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 41/174 (23%), Positives = 69/174 (39%), Gaps = 26/174 (14%)
Query: 310 LTEQQISMLLWEPIIETSDTTLVTTEWAMYELAKDPMRQDRLFQKIQSVCRSNKFTEENI 369
L+ +++ L+ I +DTT+ +A+ L + P + ++ V
Sbjct: 239 LSTKELVALVGAIIAAGTDTTIYLIAFAVLNLLRSP-------EALELVK---------- 281
Query: 370 AQVPYLGAVFHETLRKYSPAPIVPLRFAHEDTEIGGYFIPAGSEIAINIYGCNMDKKQWE 429
A+ + E LR + I +RFA +D E G I G + + I D +
Sbjct: 282 AEPGLMRNALDEVLRFDNILRIGTVRFARQDLEYCGASIKKGEMVFLLIPSALRDGTVFS 341
Query: 430 NPDEWKPERFLDGQYDPADLYKTMAFGTGKRVCAGSLQASLIACTAIGRLVQEF 483
PD + R D ++A+G G VC G A L A A+G + + F
Sbjct: 342 RPDVFDVRR---------DTSASLAYGRGPHVCPGVSLARLEAEIAVGTIFRRF 386
>pdb|2DKK|A Chain A, Structure/function Studies Of Cytochrome P450 158a1 From
Streptomyces Coelicolor A3(2)
Length = 411
Score = 38.1 bits (87), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 33/109 (30%), Positives = 46/109 (42%), Gaps = 14/109 (12%)
Query: 376 GAVFHETLRKYSPAPIVPL-RFAHEDTEIGGYFIPAGSEIAINIYGCNMDKKQWENPDEW 434
G E LR S V L R A ED E+ G I AG + ++ N D + +PD
Sbjct: 278 GTALDELLRWISHRTSVGLARIALEDVEVHGTRIAAGEPVYVSYLAANRDPDVFPDPDR- 336
Query: 435 KPERFLDGQYDPADLYKTMAFGTGKRVCAGS----LQASLIACTAIGRL 479
+D DP +A+G G C G+ +Q L+ T + RL
Sbjct: 337 -----IDLDRDP---NPHLAYGNGHHFCTGAVLARMQTELLVDTLLERL 377
>pdb|2NZ5|A Chain A, Structure And Function Studies Of Cytochrome P450 158a1
From Streptomyces Coelicolor A3(2)
pdb|2NZ5|B Chain B, Structure And Function Studies Of Cytochrome P450 158a1
From Streptomyces Coelicolor A3(2)
pdb|2NZA|A Chain A, Structure And Function Studies Of Cytochrome P450 158a1
From Streptomyces Coelicolor A3(2)
pdb|2NZA|B Chain B, Structure And Function Studies Of Cytochrome P450 158a1
From Streptomyces Coelicolor A3(2)
Length = 413
Score = 38.1 bits (87), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 33/109 (30%), Positives = 46/109 (42%), Gaps = 14/109 (12%)
Query: 376 GAVFHETLRKYSPAPIVPL-RFAHEDTEIGGYFIPAGSEIAINIYGCNMDKKQWENPDEW 434
G E LR S V L R A ED E+ G I AG + ++ N D + +PD
Sbjct: 278 GTALDELLRWISHRTSVGLARIALEDVEVHGTRIAAGEPVYVSYLAANRDPDVFPDPDR- 336
Query: 435 KPERFLDGQYDPADLYKTMAFGTGKRVCAGS----LQASLIACTAIGRL 479
+D DP +A+G G C G+ +Q L+ T + RL
Sbjct: 337 -----IDLDRDP---NPHLAYGNGHHFCTGAVLARMQTELLVDTLLERL 377
>pdb|2X9P|A Chain A, X-Ray Structure Of The Substrate-Free Cytochrome P450 Pimd
- A Polyene Macrolide Antibiotic Pimaricin Epoxidase
pdb|2XBK|A Chain A, X-Ray Structure Of The Substrate-Bound Cytochrome P450
Pimd - A Polyene Macrolide Antibiotic Pimaricin
Epoxidase
Length = 404
Score = 38.1 bits (87), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 37/80 (46%), Gaps = 9/80 (11%)
Query: 391 IVPLRFAHEDTEIGGYFIPAGSEIAINIYGCNMDKKQWENPDEWKPERFLDGQYDPADLY 450
++P R+A ED E GG I AG + ++ N D++ + P+E+ R +
Sbjct: 291 VLPPRYASEDMEFGGVTIRAGDLVLFDLGLPNFDERAFTGPEEFDAARTPNPH------- 343
Query: 451 KTMAFGTGKRVCAGSLQASL 470
+ FG G C G+ A L
Sbjct: 344 --LTFGHGIWHCIGAPLARL 361
>pdb|1UED|A Chain A, Crystal Structure Of Oxyc A Cytochrome P450 Implicated In
An Oxidative C-C Coupling Reaction During Vancomycin
Biosynthesis.
pdb|1UED|B Chain B, Crystal Structure Of Oxyc A Cytochrome P450 Implicated In
An Oxidative C-C Coupling Reaction During Vancomycin
Biosynthesis
Length = 406
Score = 37.7 bits (86), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 48/223 (21%), Positives = 78/223 (34%), Gaps = 43/223 (19%)
Query: 263 GVEMKIQRLCTRRQAVMDVLISEAKSRIASGQELNCYVDHLLSEVKS------------- 309
G+ QR RR L K+R A N Y+D+LL+ ++
Sbjct: 166 GIPRDDQREFVRRIRRNADLSRGLKARAADSAAFNRYLDNLLARQRADPDDGLLGMIVRD 225
Query: 310 ----LTEQQISMLLWEPIIETSDTTLVTTEWAMYELAKDPMRQDRLFQKIQSVCRSNKFT 365
+T++++ L I+ +T + + L +P + + LF+ + R
Sbjct: 226 HGDNVTDEELKGLCTALILGGVETVAGMIGFGVLALLDNPGQIELLFESPEKAER----- 280
Query: 366 EENIAQVPYLGAVFHETLRKYSPAPIVPLRFAHEDTEIGGYFIPAGSEIAINIYGCNMDK 425
V +E +R SP R A +D I G I AG + +I N D+
Sbjct: 281 ------------VVNELVRYLSPVQAPNPRLAIKDVVIDGQLIKAGDYVLCSILMANRDE 328
Query: 426 KQWENPDEWKPERFLDGQYDPADLYKTMAFGTGKRVCAGSLQA 468
+PD R + FG G C G+ A
Sbjct: 329 ALTPDPDVLDANRA---------AVSDVGFGHGIHYCVGAALA 362
>pdb|1WIY|A Chain A, Crystal Structure Analysis Of A 6-Coordinated Cytochorome
P450 From Thermus Thermophilus Hb8
pdb|1WIY|B Chain B, Crystal Structure Analysis Of A 6-Coordinated Cytochorome
P450 From Thermus Thermophilus Hb8
Length = 389
Score = 37.7 bits (86), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 48/106 (45%), Gaps = 5/106 (4%)
Query: 379 FHETLRKYSPAPIVPLRFAHEDTEIGGYFIPAGSEIAINIYGCNMDKKQWENPDEWKPER 438
F E LR Y PA I+ R +G +P G+ + ++ Y + + + ++PER
Sbjct: 258 FQEALRLYPPAWILTRRL-ERPLLLGEDRLPQGTTLVLSPYVTQ--RLYFPEGEAFQPER 314
Query: 439 FLDGQYDPADLYKTMAFGTGKRVCAGSLQASLIACTAIGRLVQEFK 484
FL + P+ Y FG G+R+C G A L + + F+
Sbjct: 315 FLAERGTPSGRY--FPFGLGQRLCLGRDFALLEGPIVLRAFFRRFR 358
>pdb|2BVJ|A Chain A, Ligand-Free Structure Of Cytochrome P450 Pikc (Cyp107l1)
pdb|2BVJ|B Chain B, Ligand-Free Structure Of Cytochrome P450 Pikc (Cyp107l1)
pdb|2C6H|A Chain A, Crystal Structure Of Yc-17-Bound Cytochrome P450 Pikc
(Cyp107l1)
pdb|2C6H|B Chain B, Crystal Structure Of Yc-17-Bound Cytochrome P450 Pikc
(Cyp107l1)
pdb|2C7X|A Chain A, Crystal Structure Of Narbomycin-Bound Cytochrome P450 Pikc
(Cyp107l1)
pdb|2CA0|A Chain A, Crystal Structure Of Yc-17-Bound Cytochrome P450 Pikc
(Cyp107l1)
pdb|2CA0|B Chain B, Crystal Structure Of Yc-17-Bound Cytochrome P450 Pikc
(Cyp107l1)
pdb|2CD8|A Chain A, Crystal Structure Of Yc-17-Bound Cytochrome P450 Pikc
(Cyp107l1)
pdb|2CD8|B Chain B, Crystal Structure Of Yc-17-Bound Cytochrome P450 Pikc
(Cyp107l1)
Length = 436
Score = 37.7 bits (86), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 28/112 (25%), Positives = 45/112 (40%), Gaps = 9/112 (8%)
Query: 370 AQVPYLGAVFHETLRKYSPAPIVPLRFAHEDTEIGGYFIPAGSEIAINIYGCNMDKKQWE 429
A + L E LR P RF E ++ G IPAG + + + + +++
Sbjct: 291 ADMTLLDGAVEEMLRYEGPVESATYRFPVEPVDLDGTVIPAGDTVLVVLADAHRTPERFP 350
Query: 430 NPDEWKPERFLDGQYDPADLYKTMAFGTGKRVCAGSLQASLIACTAIGRLVQ 481
+P + R D +AFG G C G+ A L A A+ L++
Sbjct: 351 DPHRFDIRR---------DTAGHLAFGHGIHFCIGAPLARLEARIAVRALLE 393
>pdb|2VZ7|A Chain A, Crystal Structure Of The Yc-17-Bound Pikc D50n Mutant
pdb|2VZ7|B Chain B, Crystal Structure Of The Yc-17-Bound Pikc D50n Mutant
pdb|2VZM|A Chain A, Crystal Structure Of The Narbomycin-Bound Pikc D50n Mutant
pdb|2VZM|B Chain B, Crystal Structure Of The Narbomycin-Bound Pikc D50n Mutant
Length = 436
Score = 37.7 bits (86), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 28/112 (25%), Positives = 45/112 (40%), Gaps = 9/112 (8%)
Query: 370 AQVPYLGAVFHETLRKYSPAPIVPLRFAHEDTEIGGYFIPAGSEIAINIYGCNMDKKQWE 429
A + L E LR P RF E ++ G IPAG + + + + +++
Sbjct: 291 ADMTLLDGAVEEMLRYEGPVESATYRFPVEPVDLDGTVIPAGDTVLVVLADAHRTPERFP 350
Query: 430 NPDEWKPERFLDGQYDPADLYKTMAFGTGKRVCAGSLQASLIACTAIGRLVQ 481
+P + R D +AFG G C G+ A L A A+ L++
Sbjct: 351 DPHRFDIRR---------DTAGHLAFGHGIHFCIGAPLARLEARIAVRALLE 393
>pdb|2WHW|A Chain A, Selective Oxidation Of Carbolide C-H Bonds By Engineered
Macrolide P450 Monooxygenase
pdb|2WHW|B Chain B, Selective Oxidation Of Carbolide C-H Bonds By Engineered
Macrolide P450 Monooxygenase
pdb|2WI9|A Chain A, Selective Oxidation Of Carbolide C-H Bonds By Engineered
Macrolide P450 Monooxygenase
pdb|2WI9|B Chain B, Selective Oxidation Of Carbolide C-H Bonds By Engineered
Macrolide P450 Monooxygenase
Length = 436
Score = 37.7 bits (86), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 28/112 (25%), Positives = 45/112 (40%), Gaps = 9/112 (8%)
Query: 370 AQVPYLGAVFHETLRKYSPAPIVPLRFAHEDTEIGGYFIPAGSEIAINIYGCNMDKKQWE 429
A + L E LR P RF E ++ G IPAG + + + + +++
Sbjct: 291 ADMTLLDGAVEEMLRYEGPVESATYRFPVEPVDLDGTVIPAGDTVLVVLADAHRTPERFP 350
Query: 430 NPDEWKPERFLDGQYDPADLYKTMAFGTGKRVCAGSLQASLIACTAIGRLVQ 481
+P + R D +AFG G C G+ A L A A+ L++
Sbjct: 351 DPHRFDIRR---------DTAGHLAFGHGIHFCIGAPLARLEARIAVRALLE 393
>pdb|3P3L|A Chain A, Crystal Structure Of The Cytochrome P450 Monooxygenase
Aurh (Wildtype) From Streptomyces Thioluteus
pdb|3P3L|B Chain B, Crystal Structure Of The Cytochrome P450 Monooxygenase
Aurh (Wildtype) From Streptomyces Thioluteus
Length = 406
Score = 37.4 bits (85), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 43/194 (22%), Positives = 79/194 (40%), Gaps = 28/194 (14%)
Query: 287 KSRIASGQELNCYVDHLLSEVKSLTEQQISMLLWEPIIETSDTTLVTTEWAMYELAKDPM 346
K ++ G +L + + L + ++ L+ ++ +TT AMY+ A+ P
Sbjct: 206 KRKVEPGDDLTSDIVRAFHD-GVLDDYELRTLVATVLVAGYETTNHQLALAMYDFAQHPD 264
Query: 347 RQDRLFQKIQSVCRSNKFTEENIAQVPYLGAVFHETLRKYSPA-PIVPLRFAHEDTEIGG 405
+ + KI+ EN P L E + ++SP P+ R A ED E+ G
Sbjct: 265 Q----WMKIK----------EN----PELAPQAVEEVLRWSPTLPVTATRVAAEDFEVNG 306
Query: 406 YFIPAGSEIAINIYGCNMDKKQWENPDEWKPERFLDGQYDPADLYKTMAFGTGKRVCAGS 465
IP G+ + + + + D + + + D + + ++AFG G C G+
Sbjct: 307 VRIPTGTPVFMCAHVAHRDPRVFADADRFDITVKREA--------PSIAFGGGPHFCLGT 358
Query: 466 LQASLIACTAIGRL 479
A L A+ L
Sbjct: 359 ALARLELTEAVAAL 372
>pdb|3P3O|A Chain A, Crystal Structure Of The Cytochrome P450 Monooxygenase
Aurh (Ntermii) From Streptomyces Thioluteus
pdb|3P3X|A Chain A, Crystal Structure Of The Cytochrome P450 Monooxygenase
Aurh (Nterm- Aurh-I) From Streptomyces Thioluteus
pdb|3P3X|B Chain B, Crystal Structure Of The Cytochrome P450 Monooxygenase
Aurh (Nterm- Aurh-I) From Streptomyces Thioluteus
pdb|3P3Z|A Chain A, Crystal Structure Of The Cytochrome P450 Monooxygenase
Aurh From Streptomyces Thioluteus In Complex With
Ancymidol
Length = 416
Score = 37.0 bits (84), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 47/221 (21%), Positives = 93/221 (42%), Gaps = 32/221 (14%)
Query: 261 NKGVEMKIQRLCTRRQAVMDVLISE-AKSRIASGQELNCYVDHLLSEVKSLTEQQISMLL 319
++ + +K+++ R + D L++ K ++ G +L + + L + ++ L+
Sbjct: 192 DQDILVKVEQGLGR---MFDYLVAAIEKRKVEPGDDLTSDIVRAFHD-GVLDDYELRTLV 247
Query: 320 WEPIIETSDTTLVTTEWAMYELAKDPMRQDRLFQKIQSVCRSNKFTEENIAQVPYLGAVF 379
++ +TT AMY+ A+ P + + KI+ EN P L
Sbjct: 248 ATVLVAGYETTNHQLALAMYDFAQHPDQ----WMKIK----------EN----PELAPQA 289
Query: 380 HETLRKYSPA-PIVPLRFAHEDTEIGGYFIPAGSEIAINIYGCNMDKKQWENPDEWKPER 438
E + ++SP P+ R A ED E+ G IP G+ + + + + D + + + D +
Sbjct: 290 VEEVLRWSPTLPVTATRVAAEDFEVNGVRIPTGTPVFMCAHVAHRDPRVFADADRFDITV 349
Query: 439 FLDGQYDPADLYKTMAFGTGKRVCAGSLQASLIACTAIGRL 479
+ ++AFG G C G+ A L A+ L
Sbjct: 350 KREA--------PSIAFGGGPHFCLGTALARLELTEAVAAL 382
>pdb|1SE6|A Chain A, Crystal Structure Of Streptomyces Coelicolor A3(2)
Cyp158a2 From Antibiotic Biosynthetic Pathways
pdb|1SE6|B Chain B, Crystal Structure Of Streptomyces Coelicolor A3(2)
Cyp158a2 From Antibiotic Biosynthetic Pathways
Length = 406
Score = 36.6 bits (83), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 33/76 (43%), Gaps = 9/76 (11%)
Query: 395 RFAHEDTEIGGYFIPAGSEIAINIYGCNMDKKQWENPDEWKPERFLDGQYDPADLYKTMA 454
R A ED EI G I AG + ++ N D + + +PD ER + ++
Sbjct: 295 RIALEDVEIKGVRIRAGDAVYVSYLAANRDPEVFPDPDRIDFERSPNPH---------VS 345
Query: 455 FGTGKRVCAGSLQASL 470
FG G C G + A L
Sbjct: 346 FGFGPHYCPGGMLARL 361
>pdb|3TNK|A Chain A, Crystal Structure Of Mutant I87r In Cyp158a2
pdb|3TNK|B Chain B, Crystal Structure Of Mutant I87r In Cyp158a2
Length = 407
Score = 36.6 bits (83), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 33/76 (43%), Gaps = 9/76 (11%)
Query: 395 RFAHEDTEIGGYFIPAGSEIAINIYGCNMDKKQWENPDEWKPERFLDGQYDPADLYKTMA 454
R A ED EI G I AG + ++ N D + + +PD ER + ++
Sbjct: 295 RIALEDVEIKGVRIRAGDAVYVSYLAANRDPEVFPDPDRIDFERSPNPH---------VS 345
Query: 455 FGTGKRVCAGSLQASL 470
FG G C G + A L
Sbjct: 346 FGFGPHYCPGGMLARL 361
>pdb|2D0E|A Chain A, Substrate Assited In Oxygen Activation In Cytochrome P450
158a2
Length = 407
Score = 36.6 bits (83), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 33/76 (43%), Gaps = 9/76 (11%)
Query: 395 RFAHEDTEIGGYFIPAGSEIAINIYGCNMDKKQWENPDEWKPERFLDGQYDPADLYKTMA 454
R A ED EI G I AG + ++ N D + + +PD ER + ++
Sbjct: 295 RIALEDVEIKGVRIRAGDAVYVSYLAANRDPEVFPDPDRIDFERSPNPH---------VS 345
Query: 455 FGTGKRVCAGSLQASL 470
FG G C G + A L
Sbjct: 346 FGFGPHYCPGGMLARL 361
>pdb|3TZO|A Chain A, The Role Of I87 Of Cyp158a2 In Oxidative Coupling Reaction
pdb|3TZO|B Chain B, The Role Of I87 Of Cyp158a2 In Oxidative Coupling Reaction
Length = 410
Score = 36.6 bits (83), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 33/76 (43%), Gaps = 9/76 (11%)
Query: 395 RFAHEDTEIGGYFIPAGSEIAINIYGCNMDKKQWENPDEWKPERFLDGQYDPADLYKTMA 454
R A ED EI G I AG + ++ N D + + +PD ER + ++
Sbjct: 295 RIALEDVEIKGVRIRAGDAVYVSYLAANRDPEVFPDPDRIDFERSPNPH---------VS 345
Query: 455 FGTGKRVCAGSLQASL 470
FG G C G + A L
Sbjct: 346 FGFGPHYCPGGMLARL 361
>pdb|1S1F|A Chain A, Crystal Structure Of Streptomyces Coelicolor A3(2)
Cyp158a2 From Antibiotic Biosynthetic Pathways
Length = 406
Score = 36.6 bits (83), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 33/76 (43%), Gaps = 9/76 (11%)
Query: 395 RFAHEDTEIGGYFIPAGSEIAINIYGCNMDKKQWENPDEWKPERFLDGQYDPADLYKTMA 454
R A ED EI G I AG + ++ N D + + +PD ER + ++
Sbjct: 295 RIALEDVEIKGVRIRAGDAVYVSYLAANRDPEVFPDPDRIDFERSPNPH---------VS 345
Query: 455 FGTGKRVCAGSLQASL 470
FG G C G + A L
Sbjct: 346 FGFGPHYCPGGMLARL 361
>pdb|1T93|A Chain A, Evidence For Multiple Substrate Recognition And Molecular
Mechanism Of C-C Reaction By Cytochrome P450 Cyp158a2
From Streptomyces Coelicolor A3(2)
Length = 406
Score = 36.6 bits (83), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 33/76 (43%), Gaps = 9/76 (11%)
Query: 395 RFAHEDTEIGGYFIPAGSEIAINIYGCNMDKKQWENPDEWKPERFLDGQYDPADLYKTMA 454
R A ED EI G I AG + ++ N D + + +PD ER + ++
Sbjct: 295 RIALEDVEIKGVRIRAGDAVYVSYLAANRDPEVFPDPDRIDFERSPNPH---------VS 345
Query: 455 FGTGKRVCAGSLQASL 470
FG G C G + A L
Sbjct: 346 FGFGPHYCPGGMLARL 361
>pdb|2D09|A Chain A, A Role For Active Site Water Molecules And Hydroxyl Groups
Of Substrate For Oxygen Activation In Cytochrome P450
158a2
Length = 407
Score = 36.6 bits (83), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 33/76 (43%), Gaps = 9/76 (11%)
Query: 395 RFAHEDTEIGGYFIPAGSEIAINIYGCNMDKKQWENPDEWKPERFLDGQYDPADLYKTMA 454
R A ED EI G I AG + ++ N D + + +PD ER + ++
Sbjct: 295 RIALEDVEIKGVRIRAGDAVYVSYLAANRDPEVFPDPDRIDFERSPNPH---------VS 345
Query: 455 FGTGKRVCAGSLQASL 470
FG G C G + A L
Sbjct: 346 FGFGPHYCPGGMLARL 361
>pdb|3CXZ|A Chain A, Crystal Structure Of Cytochrome P450 Cyp121 R386l Mutant
From M. Tuberculosis
Length = 396
Score = 35.8 bits (81), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 18/71 (25%), Positives = 30/71 (42%), Gaps = 8/71 (11%)
Query: 395 RFAHEDTEIGGYFIPAGSEIAINIYGCNMDKKQWENPDEWKPERFLDGQYDPADLYKTMA 454
R A D ++G + G + + + G N D + + NP + D + +A
Sbjct: 286 RLATADIQVGDVLVRKGELVLVLLEGANFDPEHFPNPGSI--------ELDRPNPTSHLA 337
Query: 455 FGTGKRVCAGS 465
FG G+ C GS
Sbjct: 338 FGRGQHFCPGS 348
>pdb|1N40|A Chain A, Atomic Structure Of Cyp121, A Mycobacterial P450
pdb|1N4G|A Chain A, Structure Of Cyp121, A Mycobacterial P450, In Complex With
Iodopyrazole
pdb|2IJ5|A Chain A, Crystal Structure Of Cytochrome P450 Cyp121, P212121 Space
Group
pdb|2IJ5|B Chain B, Crystal Structure Of Cytochrome P450 Cyp121, P212121 Space
Group
pdb|2IJ5|C Chain C, Crystal Structure Of Cytochrome P450 Cyp121, P212121 Space
Group
pdb|2IJ5|D Chain D, Crystal Structure Of Cytochrome P450 Cyp121, P212121 Space
Group
pdb|2IJ5|E Chain E, Crystal Structure Of Cytochrome P450 Cyp121, P212121 Space
Group
pdb|2IJ5|F Chain F, Crystal Structure Of Cytochrome P450 Cyp121, P212121 Space
Group
pdb|2IJ7|A Chain A, Structure Of Mycobacterium Tuberculosis Cyp121 In Complex
With The Antifungal Drug Fluconazole
pdb|2IJ7|B Chain B, Structure Of Mycobacterium Tuberculosis Cyp121 In Complex
With The Antifungal Drug Fluconazole
pdb|2IJ7|C Chain C, Structure Of Mycobacterium Tuberculosis Cyp121 In Complex
With The Antifungal Drug Fluconazole
pdb|2IJ7|D Chain D, Structure Of Mycobacterium Tuberculosis Cyp121 In Complex
With The Antifungal Drug Fluconazole
pdb|2IJ7|E Chain E, Structure Of Mycobacterium Tuberculosis Cyp121 In Complex
With The Antifungal Drug Fluconazole
pdb|2IJ7|F Chain F, Structure Of Mycobacterium Tuberculosis Cyp121 In Complex
With The Antifungal Drug Fluconazole
pdb|3G5F|A Chain A, Crystallographic Analysis Of Cytochrome P450 Cyp121
pdb|3G5H|A Chain A, Crystallographic Analysis Of Cytochrome P450 Cyp121
pdb|4G44|A Chain A, Structure Of P450 Cyp121 In Complex With Lead Compound
Mb286, 3-((1h- 1,2,4-Triazol-1-Yl)methyl)aniline
pdb|4G45|A Chain A, Structure Of Cytochrome Cyp121 In Complex With
2-Methylquinolin-6- Amine
pdb|4G46|A Chain A, Structure Of Cytochrome P450 Cyp121 In Complex With
4-Oxo-4,5,6,7- Tetrahydrobenzofuran-3-Carboxylate
pdb|4G47|A Chain A, Structure Of Cytochrome P450 Cyp121 In Complex With
4-(1h-1,2,4- Triazol-1-Yl)phenol
pdb|4G48|A Chain A, Structure Of Cyp121 In Complex With
4-(4-Phenoxy-1h-Pyrazol-3-Yl) Benzene-1,3-Diol
Length = 396
Score = 35.8 bits (81), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 18/71 (25%), Positives = 30/71 (42%), Gaps = 8/71 (11%)
Query: 395 RFAHEDTEIGGYFIPAGSEIAINIYGCNMDKKQWENPDEWKPERFLDGQYDPADLYKTMA 454
R A D ++G + G + + + G N D + + NP + D + +A
Sbjct: 286 RLATADIQVGDVLVRKGELVLVLLEGANFDPEHFPNPGSI--------ELDRPNPTSHLA 337
Query: 455 FGTGKRVCAGS 465
FG G+ C GS
Sbjct: 338 FGRGQHFCPGS 348
>pdb|3CY1|A Chain A, Crystal Structure Of The Cytochrome P450 Cyp121 S279a
Mutant From M. Tuberculosis
Length = 396
Score = 35.8 bits (81), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 18/71 (25%), Positives = 30/71 (42%), Gaps = 8/71 (11%)
Query: 395 RFAHEDTEIGGYFIPAGSEIAINIYGCNMDKKQWENPDEWKPERFLDGQYDPADLYKTMA 454
R A D ++G + G + + + G N D + + NP + D + +A
Sbjct: 286 RLATADIQVGDVLVRKGELVLVLLEGANFDPEHFPNPGSI--------ELDRPNPTSHLA 337
Query: 455 FGTGKRVCAGS 465
FG G+ C GS
Sbjct: 338 FGRGQHFCPGS 348
>pdb|3CY0|A Chain A, Crystal Structure Of Cytochrome P450 Cyp121 S237a Mutant
From Mycobacterium Tuberculosis
Length = 396
Score = 35.8 bits (81), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 18/71 (25%), Positives = 30/71 (42%), Gaps = 8/71 (11%)
Query: 395 RFAHEDTEIGGYFIPAGSEIAINIYGCNMDKKQWENPDEWKPERFLDGQYDPADLYKTMA 454
R A D ++G + G + + + G N D + + NP + D + +A
Sbjct: 286 RLATADIQVGDVLVRKGELVLVLLEGANFDPEHFPNPGSI--------ELDRPNPTSHLA 337
Query: 455 FGTGKRVCAGS 465
FG G+ C GS
Sbjct: 338 FGRGQHFCPGS 348
>pdb|4G1X|A Chain A, Crystal Structure Of Mycobacterium Tuberculosis Cyp121 In
Complex With 4-(1h-1,2,4-Triazol-1-Yl)quinolin-6-Amine
pdb|4G2G|A Chain A, Crystal Structure Of Mycobacterium Tuberculosis Cyp121 In
Complex With 4,4'-(1h-1,2,3-Triazole-1,5-Diyl)diphenol
Length = 395
Score = 35.8 bits (81), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 18/71 (25%), Positives = 30/71 (42%), Gaps = 8/71 (11%)
Query: 395 RFAHEDTEIGGYFIPAGSEIAINIYGCNMDKKQWENPDEWKPERFLDGQYDPADLYKTMA 454
R A D ++G + G + + + G N D + + NP + D + +A
Sbjct: 285 RLATADIQVGDVLVRKGELVLVLLEGANFDPEHFPNPGSI--------ELDRPNPTSHLA 336
Query: 455 FGTGKRVCAGS 465
FG G+ C GS
Sbjct: 337 FGRGQHFCPGS 347
>pdb|3CXV|A Chain A, Crystal Structure Of The Cytochrome P450 Cyp121 A233g
Mutant From Mycobacterium Tuberculosis
Length = 396
Score = 35.8 bits (81), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 18/71 (25%), Positives = 30/71 (42%), Gaps = 8/71 (11%)
Query: 395 RFAHEDTEIGGYFIPAGSEIAINIYGCNMDKKQWENPDEWKPERFLDGQYDPADLYKTMA 454
R A D ++G + G + + + G N D + + NP + D + +A
Sbjct: 286 RLATADIQVGDVLVRKGELVLVLLEGANFDPEHFPNPGSI--------ELDRPNPTSHLA 337
Query: 455 FGTGKRVCAGS 465
FG G+ C GS
Sbjct: 338 FGRGQHFCPGS 348
>pdb|3CXY|A Chain A, Crystal Structure Of The Cytochrome P450 Cyp121 P346l
Mutant From M. Tuberculosis
Length = 396
Score = 35.4 bits (80), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 18/71 (25%), Positives = 30/71 (42%), Gaps = 8/71 (11%)
Query: 395 RFAHEDTEIGGYFIPAGSEIAINIYGCNMDKKQWENPDEWKPERFLDGQYDPADLYKTMA 454
R A D ++G + G + + + G N D + + NP + D + +A
Sbjct: 286 RLATADIQVGDVLVRKGELVLVLLEGANFDPEHFPNPGSI--------ELDRPNPTSHLA 337
Query: 455 FGTGKRVCAGS 465
FG G+ C GS
Sbjct: 338 FGRGQHFCLGS 348
>pdb|2YOO|A Chain A, Cholest-4-en-3-one Bound Structure Of Cyp142 From
Mycobacterium Smegmatis
pdb|2YOO|B Chain B, Cholest-4-en-3-one Bound Structure Of Cyp142 From
Mycobacterium Smegmatis
pdb|2YOO|C Chain C, Cholest-4-en-3-one Bound Structure Of Cyp142 From
Mycobacterium Smegmatis
pdb|2YOO|D Chain D, Cholest-4-en-3-one Bound Structure Of Cyp142 From
Mycobacterium Smegmatis
pdb|3ZBY|A Chain A, Ligand-free Structure Of Cyp142 From Mycobacterium
Smegmatis
pdb|3ZBY|B Chain B, Ligand-free Structure Of Cyp142 From Mycobacterium
Smegmatis
pdb|3ZBY|C Chain C, Ligand-free Structure Of Cyp142 From Mycobacterium
Smegmatis
pdb|3ZBY|D Chain D, Ligand-free Structure Of Cyp142 From Mycobacterium
Smegmatis
pdb|3ZBY|E Chain E, Ligand-free Structure Of Cyp142 From Mycobacterium
Smegmatis
pdb|3ZBY|F Chain F, Ligand-free Structure Of Cyp142 From Mycobacterium
Smegmatis
Length = 407
Score = 35.0 bits (79), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 28/102 (27%), Positives = 42/102 (41%), Gaps = 10/102 (9%)
Query: 369 IAQVPYLGAVFHETLRKYSPAPIVPLRFAHEDTEIGGYFIPAGSEIAINIYGCNMDKKQW 428
+A V L E LR SP + R DT G + AG +I + N D+ +
Sbjct: 260 VADVDLLPGAIEEMLRWTSPVKNM-CRTLTADTVFHGTELRAGEKIMLMFESANFDESVF 318
Query: 429 ENPDEWKPERFLDGQYDPADLYKTMAFGTGKRVCAGSLQASL 470
+PD ++ +R + +AFG G C G+ A L
Sbjct: 319 GDPDNFRIDRNPNSH---------VAFGFGTHFCLGNQLARL 351
>pdb|3ABA|A Chain A, Crystal Structure Of Cyp105p1 In Complex With Filipin I
Length = 403
Score = 34.3 bits (77), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 37/90 (41%), Gaps = 9/90 (10%)
Query: 375 LGAVFHETLRKYSPAPIVPLRFAHEDTEIGGYFIPAGSEIAINIYGCNMDKKQWENPDEW 434
+G E LR + R A D E+GG I G ++ ++ + D E
Sbjct: 270 VGNAVEELLRYLTIGQFGGERVATRDVELGGVRIAKGEQVVAHVLAADFDPAFVE----- 324
Query: 435 KPERFLDGQYDPADLYKTMAFGTGKRVCAG 464
+PERF D PA +AFG G C G
Sbjct: 325 EPERF-DITRRPA---PHLAFGFGAHQCIG 350
>pdb|3E5L|A Chain A, Crystal Structure Of Cyp105p1 H72a Mutant
Length = 403
Score = 34.3 bits (77), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 37/90 (41%), Gaps = 9/90 (10%)
Query: 375 LGAVFHETLRKYSPAPIVPLRFAHEDTEIGGYFIPAGSEIAINIYGCNMDKKQWENPDEW 434
+G E LR + R A D E+GG I G ++ ++ + D E
Sbjct: 270 VGNAVEELLRYLTIGQFGGERVATRDVELGGVRIAKGEQVVAHVLAADFDPAFVE----- 324
Query: 435 KPERFLDGQYDPADLYKTMAFGTGKRVCAG 464
+PERF D PA +AFG G C G
Sbjct: 325 EPERF-DITRRPA---PHLAFGFGAHQCIG 350
>pdb|3E5J|A Chain A, Crystal Structure Of Cyp105p1 Wild-type Ligand-free Form
pdb|3E5K|A Chain A, Crystal Structure Of Cyp105p1 Wild-Type 4-Phenylimidazole
Complex
Length = 403
Score = 34.3 bits (77), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 37/90 (41%), Gaps = 9/90 (10%)
Query: 375 LGAVFHETLRKYSPAPIVPLRFAHEDTEIGGYFIPAGSEIAINIYGCNMDKKQWENPDEW 434
+G E LR + R A D E+GG I G ++ ++ + D E
Sbjct: 270 VGNAVEELLRYLTIGQFGGERVATRDVELGGVRIAKGEQVVAHVLAADFDPAFVE----- 324
Query: 435 KPERFLDGQYDPADLYKTMAFGTGKRVCAG 464
+PERF D PA +AFG G C G
Sbjct: 325 EPERF-DITRRPA---PHLAFGFGAHQCIG 350
>pdb|2ZBX|A Chain A, Crystal Structure Of Vitamin D Hydroxylase Cytochrome P450
105a1 (Wild Type) With Imidazole Bound
Length = 412
Score = 33.9 bits (76), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 37/95 (38%), Gaps = 10/95 (10%)
Query: 376 GAVFHETLRKYSPAPIVPLRFAHEDTEIGGYFIPAGSEIAINIYGCNMDKKQWENPDEWK 435
GAV E LR + A I R A D E+ G I AG + + N D +E+PD
Sbjct: 279 GAV-EELLRYLAIADIAGGRVATADIEVEGQLIRAGEGVIVVNSIANRDGTVYEDPDALD 337
Query: 436 PERFLDGQYDPADLYKTMAFGTGKRVCAGSLQASL 470
R +AFG G C G A L
Sbjct: 338 IHR---------SARHHLAFGFGVHQCLGQNLARL 363
>pdb|3CV8|A Chain A, Crystal Structure Of Vitamin D Hydroxylase Cytochrome P450
105a1 (R84f Mutant)
Length = 412
Score = 33.9 bits (76), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 37/95 (38%), Gaps = 10/95 (10%)
Query: 376 GAVFHETLRKYSPAPIVPLRFAHEDTEIGGYFIPAGSEIAINIYGCNMDKKQWENPDEWK 435
GAV E LR + A I R A D E+ G I AG + + N D +E+PD
Sbjct: 279 GAV-EELLRYLAIADIAGGRVATADIEVEGQLIRAGEGVIVVNSIANRDGTVYEDPDALD 337
Query: 436 PERFLDGQYDPADLYKTMAFGTGKRVCAGSLQASL 470
R +AFG G C G A L
Sbjct: 338 IHR---------SARHHLAFGFGVHQCLGQNLARL 363
>pdb|2ZBY|A Chain A, Crystal Structure Of Vitamin D Hydroxylase Cytochrome P450
105a1 (R84a Mutant)
pdb|2ZBZ|A Chain A, Crystal Structure Of Vitamin D Hydroxylase Cytochrome P450
105a1 (R84a Mutant) In Complex With
1,25-Dihydroxyvitamin D3
Length = 412
Score = 33.9 bits (76), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 37/95 (38%), Gaps = 10/95 (10%)
Query: 376 GAVFHETLRKYSPAPIVPLRFAHEDTEIGGYFIPAGSEIAINIYGCNMDKKQWENPDEWK 435
GAV E LR + A I R A D E+ G I AG + + N D +E+PD
Sbjct: 279 GAV-EELLRYLAIADIAGGRVATADIEVEGQLIRAGEGVIVVNSIANRDGTVYEDPDALD 337
Query: 436 PERFLDGQYDPADLYKTMAFGTGKRVCAGSLQASL 470
R +AFG G C G A L
Sbjct: 338 IHR---------SARHHLAFGFGVHQCLGQNLARL 363
>pdb|3CV9|A Chain A, Crystal Structure Of Vitamin D Hydroxylase Cytochrome P450
105a1 (R73aR84A MUTANT) IN COMPLEX WITH 1ALPHA,25-
Dihydroxyvitamin D3
Length = 412
Score = 33.9 bits (76), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 37/95 (38%), Gaps = 10/95 (10%)
Query: 376 GAVFHETLRKYSPAPIVPLRFAHEDTEIGGYFIPAGSEIAINIYGCNMDKKQWENPDEWK 435
GAV E LR + A I R A D E+ G I AG + + N D +E+PD
Sbjct: 279 GAV-EELLRYLAIADIAGGRVATADIEVEGQLIRAGEGVIVVNSIANRDGTVYEDPDALD 337
Query: 436 PERFLDGQYDPADLYKTMAFGTGKRVCAGSLQASL 470
R +AFG G C G A L
Sbjct: 338 IHR---------SARHHLAFGFGVHQCLGQNLARL 363
>pdb|3BUJ|A Chain A, Crystal Structure Of Calo2
Length = 397
Score = 33.1 bits (74), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 24/48 (50%), Gaps = 9/48 (18%)
Query: 421 CNMDKKQWENPDEWKPERFLDGQYDPADLYKTMAFGTGKRVCAGSLQA 468
N D ++++ PD++ ER D +M+FG G R C GS A
Sbjct: 311 ANRDPRRYDRPDDFDIER---------DPVPSMSFGAGMRYCLGSYLA 349
>pdb|3CXX|A Chain A, Crystal Structure Of Cytochrome P450 Cyp121 F338h From M.
Tuberculosis
Length = 396
Score = 32.7 bits (73), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 17/71 (23%), Positives = 29/71 (40%), Gaps = 8/71 (11%)
Query: 395 RFAHEDTEIGGYFIPAGSEIAINIYGCNMDKKQWENPDEWKPERFLDGQYDPADLYKTMA 454
R A D ++G + G + + + G N D + + NP + D + +A
Sbjct: 286 RLATADIQVGDVLVRKGELVLVLLEGANFDPEHFPNPGSI--------ELDRPNPTSHLA 337
Query: 455 FGTGKRVCAGS 465
G G+ C GS
Sbjct: 338 HGRGQHFCPGS 348
>pdb|3RWL|A Chain A, Structure Of P450pyr Hydroxylase
Length = 426
Score = 31.6 bits (70), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 21/76 (27%), Positives = 36/76 (47%), Gaps = 8/76 (10%)
Query: 395 RFAHEDTEIGGYFIPAGSEIAINIYGCNMDKKQWENPDEWKPERFLDGQYDPADLYKTMA 454
R A D+E+GG I G ++ + Y N D + + P+E+ +R Q+ ++
Sbjct: 317 RTAIADSELGGKTIRKGDKVVMWYYSGNRDDEVIDRPEEFIIDRPRPRQH--------LS 368
Query: 455 FGTGKRVCAGSLQASL 470
FG G C G+ A +
Sbjct: 369 FGFGIHRCVGNRLAEM 384
>pdb|4APY|A Chain A, Ethylene Glycol-bound Form Of P450 Cyp125a3 From
Mycobacterium Smegmatis
Length = 433
Score = 29.6 bits (65), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 13/37 (35%), Positives = 21/37 (56%)
Query: 395 RFAHEDTEIGGYFIPAGSEIAINIYGCNMDKKQWENP 431
R A ED E+GG I G + ++ N D++ +E+P
Sbjct: 301 RTALEDVELGGVQIKKGQRVVMSYRSANFDEEVFEDP 337
>pdb|3PSI|A Chain A, Crystal Structure Of The Spt6 Core Domain From
Saccharomyces Cerevisiae, Form Spt6(239-1451)
Length = 1219
Score = 29.3 bits (64), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 19/77 (24%), Positives = 37/77 (48%), Gaps = 7/77 (9%)
Query: 319 LWEPIIETSDTTLVTTEWAMYELAKDPMRQDRLFQKIQSVCRSN--KFTEENIAQVPYLG 376
L++ +ET++T+ + EW + D++FQ I + N K ++ +A+
Sbjct: 437 LFQIALETTNTSDIAIEWNNFRKLAFNQAMDKIFQDISQEVKDNLTKNCQKLVAKT---- 492
Query: 377 AVFHETLRKYSPAPIVP 393
V H+ + K AP +P
Sbjct: 493 -VRHKFMTKLDQAPFIP 508
>pdb|3PSF|A Chain A, Crystal Structure Of The Spt6 Core Domain From
Saccharomyces Cerevisiae, Form Spt6(236-1259)
Length = 1030
Score = 29.3 bits (64), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 19/77 (24%), Positives = 37/77 (48%), Gaps = 7/77 (9%)
Query: 319 LWEPIIETSDTTLVTTEWAMYELAKDPMRQDRLFQKIQSVCRSN--KFTEENIAQVPYLG 376
L++ +ET++T+ + EW + D++FQ I + N K ++ +A+
Sbjct: 440 LFQIALETTNTSDIAIEWNNFRKLAFNQAMDKIFQDISQEVKDNLTKNCQKLVAKT---- 495
Query: 377 AVFHETLRKYSPAPIVP 393
V H+ + K AP +P
Sbjct: 496 -VRHKFMTKLDQAPFIP 511
>pdb|1LFK|A Chain A, Crystal Structure Of Oxyb, A Cytochrome P450 Implicated In
An Oxidative Phenol Coupling Reaction During Vancomycin
Biosynthesis
pdb|1LG9|A Chain A, Crystal Structure Of Oxyb, A Cytochrome P450 Implicated In
An Oxidative Phenol Coupling Reaction During Vancomycin
Biosynthesis
pdb|1LGF|A Chain A, Crystal Structure Of Oxyb, A Cytochrome P450 Implicated In
An Oxidative Phenol Coupling Reaction During Vancomycin
Biosynthesis
Length = 398
Score = 29.3 bits (64), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 37/98 (37%), Gaps = 13/98 (13%)
Query: 386 YSPAPIVPLRFAHEDTEIGGYFIPAGSEIAINIYGCNMDKKQWENPDEWKPERFLDGQYD 445
YSP P R A ED + G I G + ++ N D + D LD +
Sbjct: 284 YSPTP----RIAREDLTLAGQEIKKGDSVICSLPAANRDPALAPDVDR------LDVTRE 333
Query: 446 PADLYKTMAFGTGKRVCAGSLQASLIACTAIGRLVQEF 483
P +AFG G C G+ A L T L + F
Sbjct: 334 P---IPHVAFGHGVHHCLGAALARLELRTVFTELWRRF 368
>pdb|1AG9|A Chain A, Flavodoxins That Are Required For Enzyme Activation: The
Structure Of Oxidized Flavodoxin From Escherichia Coli
At 1.8 Angstroms Resolution.
pdb|1AG9|B Chain B, Flavodoxins That Are Required For Enzyme Activation: The
Structure Of Oxidized Flavodoxin From Escherichia Coli
At 1.8 Angstroms Resolution.
pdb|1AHN|A Chain A, E. Coli Flavodoxin At 2.6 Angstroms Resolution
Length = 175
Score = 28.9 bits (63), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 35/68 (51%), Gaps = 6/68 (8%)
Query: 200 SELFAVSMKQAVGKVVESIYVKELGSTLSKD-EVFKILVLDI---MEGAIEVDWRDFFPY 255
+E A +++ +GK V ++ ++ + +D E + IL+L I G + DW DFFP
Sbjct: 14 TENIAKMIQKQLGKDVADVH--DIAKSSKEDLEAYDILLLGIPTWYYGEAQCDWDDFFPT 71
Query: 256 LRWVPNKG 263
L + G
Sbjct: 72 LEEIDFNG 79
>pdb|3RKT|A Chain A, Crystal Structure Of The Manihot Esculenta Hydroxynitrile
Lyase (Mehnl) 3kp Triple Mutant
pdb|3RKT|B Chain B, Crystal Structure Of The Manihot Esculenta Hydroxynitrile
Lyase (Mehnl) 3kp Triple Mutant
pdb|3RKT|C Chain C, Crystal Structure Of The Manihot Esculenta Hydroxynitrile
Lyase (Mehnl) 3kp Triple Mutant
pdb|3RKT|D Chain D, Crystal Structure Of The Manihot Esculenta Hydroxynitrile
Lyase (Mehnl) 3kp Triple Mutant
pdb|3RKT|E Chain E, Crystal Structure Of The Manihot Esculenta Hydroxynitrile
Lyase (Mehnl) 3kp Triple Mutant
pdb|3RKT|F Chain F, Crystal Structure Of The Manihot Esculenta Hydroxynitrile
Lyase (Mehnl) 3kp Triple Mutant
pdb|3RKT|G Chain G, Crystal Structure Of The Manihot Esculenta Hydroxynitrile
Lyase (Mehnl) 3kp Triple Mutant
pdb|3RKT|H Chain H, Crystal Structure Of The Manihot Esculenta Hydroxynitrile
Lyase (Mehnl) 3kp Triple Mutant
Length = 258
Score = 28.9 bits (63), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 15/35 (42%), Positives = 20/35 (57%), Gaps = 2/35 (5%)
Query: 339 YELAKDPMRQDRLFQKIQSVCRSNKFTEENIAQVP 373
YELAK MR LFQ + + + KFTE+ +P
Sbjct: 167 YELAKMVMRPGSLFQNV--LAQRPKFTEKGYGSIP 199
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.320 0.134 0.398
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 14,108,768
Number of Sequences: 62578
Number of extensions: 550337
Number of successful extensions: 1506
Number of sequences better than 100.0: 191
Number of HSP's better than 100.0 without gapping: 140
Number of HSP's successfully gapped in prelim test: 51
Number of HSP's that attempted gapping in prelim test: 1130
Number of HSP's gapped (non-prelim): 303
length of query: 518
length of database: 14,973,337
effective HSP length: 103
effective length of query: 415
effective length of database: 8,527,803
effective search space: 3539038245
effective search space used: 3539038245
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 54 (25.4 bits)