BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 010101
(518 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|255559348|ref|XP_002520694.1| shikimate dehydrogenase, putative [Ricinus communis]
gi|223540079|gb|EEF41656.1| shikimate dehydrogenase, putative [Ricinus communis]
Length = 515
Score = 783 bits (2022), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 398/516 (77%), Positives = 455/516 (88%), Gaps = 1/516 (0%)
Query: 3 VAAKNSLLVCTQLECETTEEMQASIEQAKVEGADLVELCIDSMEFSHISEVDKLIQHPTL 62
+A +N+LLVCT LECET EM + +E+A+ EGADLVEL +DSM FSHIS+V+KLI+ TL
Sbjct: 1 MAFQNNLLVCTPLECETAGEMLSCMEKARGEGADLVELRVDSMSFSHISQVEKLIKLRTL 60
Query: 63 PAIVSYRLKSSRKSSDEACKNTCLQVLRRALDLDVEFVEMDYEVASDPLMSEIIYSRSNT 122
PAIVS+R K+S+ SS+ K TCLQVL ALDLDVEFVEM+YEVASD M+E IY+RS+
Sbjct: 61 PAIVSFRPKTSKISSNGDSKKTCLQVLSLALDLDVEFVEMEYEVASDVSMAEYIYNRSSG 120
Query: 123 KIIVSSYLNGGGKPTTEKLGDVIACMQATGADVMKLEIAVDSITDLAPVFEMLTHCQVPL 182
K+IVSSY+NGG KP+ EKLG++IA +Q+TGADV+KL I VD ITDLAPVF+ML HCQVPL
Sbjct: 121 KLIVSSYVNGG-KPSAEKLGNLIANLQSTGADVIKLVINVDYITDLAPVFKMLAHCQVPL 179
Query: 183 IALAVGSRGLISQLLGPKFGGFLVYGSLGGKSVPGLPTLVSLKQVYQLEHINPDTKIFGL 242
IALAVGSRGLISQLLGPKFGGFLVYGSL K+VPG+PTL SL+ VY+LE+IN DTK+FGL
Sbjct: 180 IALAVGSRGLISQLLGPKFGGFLVYGSLRDKAVPGMPTLFSLRHVYKLEYINSDTKVFGL 239
Query: 243 VSNPVGHSKGPILHNPAFRHTRFNGIYVPMLVDDVKEFFRTYSGTDFAGFSVGIPHKEPA 302
+SNPVGHSKGPILHNPAFRHT +NGIYVPM VDD+KEFFRTY+ TDFAGFSVGIPHKE A
Sbjct: 240 ISNPVGHSKGPILHNPAFRHTGYNGIYVPMQVDDIKEFFRTYTSTDFAGFSVGIPHKEAA 299
Query: 303 VACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALRERQGINGVASHT 362
V+CCDEVHPLAKSIGAVNTI+RRP DGKLVGYNTDCE++I+AIEDALRER+ N A T
Sbjct: 300 VSCCDEVHPLAKSIGAVNTIVRRPTDGKLVGYNTDCEASITAIEDALRERRPTNRGALDT 359
Query: 363 SPIAGKIFVLVGAGGAGRALAFGAKSRGARVIIFNRNYERAKALADAVSGEALHFEYLHE 422
SP+AGK FVL+GAGGAGRALAFGA SRGARV++FNRN+ERAK+LA+AVSGEAL ++ L
Sbjct: 360 SPLAGKTFVLIGAGGAGRALAFGASSRGARVVVFNRNFERAKSLANAVSGEALPYKALDR 419
Query: 423 FFPEKGMILANASAIGMEPNSDQSPVPKEALKAYELVFDAVYTPRNTRLLREAAEVGATV 482
F E MILANASA+GMEPN+ QSPV KEALK+YELVFDAVYTPRNTRLL+EA EVGA V
Sbjct: 420 FQRENDMILANASAVGMEPNTHQSPVSKEALKSYELVFDAVYTPRNTRLLQEAKEVGAVV 479
Query: 483 VSGVEMFIRQALGQFRLFTGGLAPEDFMRKLVLEQF 518
VSGVEMFIRQALGQFRLFTGGLAPE FMRKLVLEQF
Sbjct: 480 VSGVEMFIRQALGQFRLFTGGLAPEAFMRKLVLEQF 515
>gi|224128592|ref|XP_002320370.1| dehydroquinate dehydratase/ shikimate dehydrogenase [Populus
trichocarpa]
gi|222861143|gb|EEE98685.1| dehydroquinate dehydratase/ shikimate dehydrogenase [Populus
trichocarpa]
Length = 504
Score = 779 bits (2012), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 397/516 (76%), Positives = 450/516 (87%), Gaps = 12/516 (2%)
Query: 3 VAAKNSLLVCTQLECETTEEMQASIEQAKVEGADLVELCIDSMEFSHISEVDKLIQHPTL 62
+A KN+LLVCT LECET EM +S+++A+ EGADL EL +DS+ FSH SEV+KLI+ TL
Sbjct: 1 MAFKNNLLVCTPLECETAGEMLSSMKRAETEGADLTELRLDSLSFSHNSEVEKLIKQRTL 60
Query: 63 PAIVSYRLKSSRKSSDEACKNTCLQVLRRALDLDVEFVEMDYEVASDPLMSEIIYSRSNT 122
P+IVS+RL+ SR SS++ KNTCLQVLR A DL+VEFVEMDYEVAS+ M+E +Y+RSNT
Sbjct: 61 PSIVSFRLEPSRISSNKDRKNTCLQVLRLAFDLNVEFVEMDYEVASEDDMAEYVYNRSNT 120
Query: 123 KIIVSSYLNGGGKPTTEKLGDVIACMQATGADVMKLEIAVDSITDLAPVFEMLTHCQVPL 182
K+IVSSY+NG KP+ E+LG +IACMQ+TGADV+KL + V+ ITDLAPVF MLTHCQ+PL
Sbjct: 121 KLIVSSYVNGR-KPSAEELGYLIACMQSTGADVLKLVLDVEKITDLAPVFTMLTHCQIPL 179
Query: 183 IALAVGSRGLISQLLGPKFGGFLVYGSLGGKSVPGLPTLVSLKQVYQLEHINPDTKIFGL 242
IALAVGSRGLISQLLGPKFGGFLVYGSL K+VPG+PTL+SL+Q+Y+LE+IN DTK+FGL
Sbjct: 180 IALAVGSRGLISQLLGPKFGGFLVYGSLSDKAVPGMPTLLSLRQIYKLEYINADTKVFGL 239
Query: 243 VSNPVGHSKGPILHNPAFRHTRFNGIYVPMLVDDVKEFFRTYSGTDFAGFSVGIPHKEPA 302
+SNPVGHSKGP+LHNPAFRHT +NGIYVPM VDDVKEFFRTY+ +DFAGFSVGIPHKE A
Sbjct: 240 ISNPVGHSKGPVLHNPAFRHTGYNGIYVPMQVDDVKEFFRTYTSSDFAGFSVGIPHKEAA 299
Query: 303 VACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALRERQGINGVASHT 362
V CCDEVHPLAKSIGAVNTI+RRP DGKLVGYNTDC+++ISAIEDAL
Sbjct: 300 VGCCDEVHPLAKSIGAVNTIVRRPTDGKLVGYNTDCDASISAIEDAL-----------TA 348
Query: 363 SPIAGKIFVLVGAGGAGRALAFGAKSRGARVIIFNRNYERAKALADAVSGEALHFEYLHE 422
SP++GK FVL+GAGGAGRALAFGAKSRGARVIIFNRNYERA+ALA AVSGEAL +E L
Sbjct: 349 SPLSGKTFVLIGAGGAGRALAFGAKSRGARVIIFNRNYERARALAKAVSGEALPYESLDR 408
Query: 423 FFPEKGMILANASAIGMEPNSDQSPVPKEALKAYELVFDAVYTPRNTRLLREAAEVGATV 482
F P GMILANASAIGMEPNSDQSPV KE LKA ELVFDAVYTPRNTRLLREA EVGA V
Sbjct: 409 FRPVNGMILANASAIGMEPNSDQSPVSKEILKACELVFDAVYTPRNTRLLREAKEVGAVV 468
Query: 483 VSGVEMFIRQALGQFRLFTGGLAPEDFMRKLVLEQF 518
VSGVEMFIRQALGQFRLFTGGLAPE FMRKLVLEQF
Sbjct: 469 VSGVEMFIRQALGQFRLFTGGLAPEAFMRKLVLEQF 504
>gi|255542470|ref|XP_002512298.1| shikimate dehydrogenase, putative [Ricinus communis]
gi|223548259|gb|EEF49750.1| shikimate dehydrogenase, putative [Ricinus communis]
Length = 519
Score = 557 bits (1435), Expect = e-156, Method: Compositional matrix adjust.
Identities = 296/514 (57%), Positives = 385/514 (74%), Gaps = 5/514 (0%)
Query: 7 NSLLVCTQLECETTEEMQASIEQAKVEGADLVELCIDSME-FSHISEVDKLIQHPTLPAI 65
+S++VCT L ++ E+M + + AK +GAD+VE+ +D ++ F ++ ++++ LP I
Sbjct: 9 SSVMVCTPLMAQSVEQMISDMYNAKTQGADVVEVRLDYIDNFQPPQDLQAILRNKPLPVI 68
Query: 66 VSYRLKSSRKSSDEACKNTCLQVLRRALDLDVEFVEMDYEVASDPLMSEIIYSR-SNTKI 124
+ YR KS E + T L+ LR A L ++V+ + +VASD L+ E+ + + +K+
Sbjct: 69 IVYRPKS-EGGLYEGDEPTRLEALRLAYVLGADYVDFELKVASD-LIGELKGTHHTGSKV 126
Query: 125 IVSSYLNGGGKPTTEKLGDVIACMQATGADVMKLEIAVDSITDLAPVFEMLTHCQVPLIA 184
IVS Y+NG PT E L ++A MQATGAD++KL ++IT+L +F ++ HCQVP+IA
Sbjct: 127 IVSCYVNGD-MPTKENLSQLVASMQATGADIIKLVSTANNITELDRIFHLILHCQVPIIA 185
Query: 185 LAVGSRGLISQLLGPKFGGFLVYGSLGGKSVPGLPTLVSLKQVYQLEHINPDTKIFGLVS 244
+VG RGLISQLL PKFGG L+YGS+ G S+PGLPTL SL++ Y++ +IN DTK+FGLVS
Sbjct: 186 YSVGERGLISQLLSPKFGGSLLYGSMEGSSIPGLPTLDSLREAYKVAYINSDTKVFGLVS 245
Query: 245 NPVGHSKGPILHNPAFRHTRFNGIYVPMLVDDVKEFFRTYSGTDFAGFSVGIPHKEPAVA 304
PV HSKGP+LHNP FRH +NG YVPM VDD+KEFF YS DFAGFSVG P+KE V
Sbjct: 246 KPVSHSKGPLLHNPTFRHANYNGTYVPMFVDDLKEFFSVYSSPDFAGFSVGFPYKEAVVE 305
Query: 305 CCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALRERQGINGVASHTSP 364
CDEVHPLAKSIGAVNTIIRRP DGKL+G+NTDCE+AI+AIEDAL+E+ ++G S SP
Sbjct: 306 FCDEVHPLAKSIGAVNTIIRRPGDGKLIGHNTDCEAAITAIEDALKEQGYMDGRTSSNSP 365
Query: 365 IAGKIFVLVGAGGAGRALAFGAKSRGARVIIFNRNYERAKALADAVSGEALHFEYLHEFF 424
+ G+ FVLVGAGGAGRALAFGAKSRGAR++IF+ + ERAK LADAVSGEA FE + F
Sbjct: 366 LTGRQFVLVGAGGAGRALAFGAKSRGARIVIFDIDLERAKFLADAVSGEAQLFENVVNFE 425
Query: 425 PEKGMILANASAIGMEPNSDQSPVPKEALKAYELVFDAVYTPRNTRLLREAAEVGATVVS 484
PE G ILANA+ IGM PN+++ PV + L Y+LVFDAVYTPR TRLL+EA GA +VS
Sbjct: 426 PENGAILANATPIGMHPNTERIPVAEATLGIYQLVFDAVYTPRKTRLLKEAEAAGAIIVS 485
Query: 485 GVEMFIRQALGQFRLFTGGLAPEDFMRKLVLEQF 518
GVEMF+RQA+GQF LFTG AP +FMR++VL +F
Sbjct: 486 GVEMFLRQAMGQFSLFTGREAPTEFMREIVLAKF 519
>gi|116787099|gb|ABK24375.1| unknown [Picea sitchensis]
Length = 514
Score = 553 bits (1425), Expect = e-155, Method: Compositional matrix adjust.
Identities = 294/519 (56%), Positives = 382/519 (73%), Gaps = 11/519 (2%)
Query: 5 AKNSLLVCTQLECETTEEMQASIEQAKVEGADLVELCIDSMEFSHISEVDKLIQHPTLPA 64
A+N LVC+ L ET EEM + ++ AK GAD +E+ +D + +++++L++ LP
Sbjct: 2 AQNGFLVCSPLMAETVEEMLSQMQHAKDVGADCIEIRLDCLNGYATTDLEQLLKARVLPT 61
Query: 65 IVSYRLKS--SRKSSDEACKNTCLQVLRRALDLDVEFVEMDYEVASDPLMSEIIYSRSNT 122
IV+YRLKS + DE + L LR A +L +F++++ +VA D + SN
Sbjct: 62 IVTYRLKSEGGKYEVDEKKR---LDTLRLAHELGADFIDVELQVAFDFVSRIKDKKSSNC 118
Query: 123 KIIVSSYLNGGGKPTTEKLGDVIACMQATGADVMKLEIAVDSITDLAPVFEMLTHCQVPL 182
KIIVS++++G P+TE L ++ MQ+TGAD++K+ +ITD++ VF+++ HCQVP+
Sbjct: 119 KIIVSNHISGR-TPSTEDLSHLVVNMQSTGADILKIVTTATNITDVSRVFQLIPHCQVPI 177
Query: 183 IALAVGSRGLISQLLGPKFGGFLVYGSLG-GK-SVPGLPTLVSLKQVYQLEHINPDTKIF 240
IA G RGLISQLLGPKFGG+L+YGS+G GK S PG P L L Y++ +N DTK+F
Sbjct: 178 IACVTGDRGLISQLLGPKFGGYLIYGSIGSGKDSTPGQPKLADLTGHYKIGRLNSDTKVF 237
Query: 241 GLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLVDDVKEFFRTYSGTDFAGFSVGIPHKE 300
G+++NPVGHSKGPILHN AFR FNG+YVP+LVD++ +F + YS DFAGFSVGIPHKE
Sbjct: 238 GVIANPVGHSKGPILHNQAFRDAGFNGVYVPLLVDNLADFLKVYSAPDFAGFSVGIPHKE 297
Query: 301 PAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALRERQG-INGVA 359
AV CCDEV PLA+SIGAVNTI+RR DGKL+GYNTDCE AISAIED L+ G IN +
Sbjct: 298 AAVTCCDEVQPLAQSIGAVNTIVRRQSDGKLIGYNTDCEGAISAIEDGLKGETGSIN--S 355
Query: 360 SHTSPIAGKIFVLVGAGGAGRALAFGAKSRGARVIIFNRNYERAKALADAVSGEALHFEY 419
+SP+AG+ FVLVGAGGAGRALAFGAK RGA VII NRNYERAK+LA++V GEA+ E
Sbjct: 356 GSSSPLAGRTFVLVGAGGAGRALAFGAKQRGAHVIIANRNYERAKSLANSVGGEAIAVEQ 415
Query: 420 LHEFFPEKGMILANASAIGMEPNSDQSPVPKEALKAYELVFDAVYTPRNTRLLREAAEVG 479
L+ F PE G +LAN SA+GM+PN + +P+ KEAL AY LVFDAVYTPR TRLLREA E G
Sbjct: 416 LNSFRPETGAVLANTSAVGMQPNVNATPLSKEALGAYTLVFDAVYTPRETRLLREAKEAG 475
Query: 480 ATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRKLVLEQF 518
VVSG+EMFIRQA+GQ+ LFTG AP + +RK+V++ F
Sbjct: 476 KIVVSGLEMFIRQAIGQYELFTGKPAPTELIRKIVMKDF 514
>gi|224130894|ref|XP_002328402.1| dehydroquinate dehydratase/ shikimate dehydrogenase [Populus
trichocarpa]
gi|222838117|gb|EEE76482.1| dehydroquinate dehydratase/ shikimate dehydrogenase [Populus
trichocarpa]
Length = 518
Score = 552 bits (1423), Expect = e-154, Method: Compositional matrix adjust.
Identities = 294/514 (57%), Positives = 383/514 (74%), Gaps = 6/514 (1%)
Query: 7 NSLLVCTQLECETTEEMQASIEQAKVEGADLVELCIDSM-EFSHISEVDKLIQHPTLPAI 65
NS++VC L ++ E+M + AK +GAD+VE+ +D + +F +++ +I++ LP I
Sbjct: 9 NSVMVCAPLMAQSVEQMVIDMHSAKAQGADVVEVRLDCISKFQPRQDLETIIRNKPLPVI 68
Query: 66 VSYRLKSSRKSSDEACKNTCLQVLRRALDLDVEFVEMDYEVASDPLMSEIIYSRSNT-KI 124
+ YR K E ++ L+ LR A DL ++++++ +VAS+ L+ E+ N K+
Sbjct: 69 IVYRPKW-EGGQYEGDEHRRLEALRLANDLGADYIDLELKVASE-LIWELKNKHQNGGKV 126
Query: 125 IVSSYLNGGGKPTTEKLGDVIACMQATGADVMKLEIAVDSITDLAPVFEMLTHCQVPLIA 184
IVSSYLNG P+ E L ++A MQAT AD++K+ D IT++ +F +L+HC+VP +A
Sbjct: 127 IVSSYLNGA-TPSKENLSHLVATMQATEADIIKVVSNADDITEMERIFHLLSHCEVPAVA 185
Query: 185 LAVGSRGLISQLLGPKFGGFLVYGSLGGKSVPGLPTLVSLKQVYQLEHINPDTKIFGLVS 244
+VG RGLISQLL PKFGG LVYGS+ G S+PGLPTL SL++ Y+++ IN DTK+FGLVS
Sbjct: 186 YSVGERGLISQLLCPKFGGALVYGSMEGNSIPGLPTLDSLREAYKVDCINSDTKVFGLVS 245
Query: 245 NPVGHSKGPILHNPAFRHTRFNGIYVPMLVDDVKEFFRTYSGTDFAGFSVGIPHKEPAVA 304
PVGHSKGP+LHNP RH FNGIYVPM VDD+K+FF Y+ DFAG+SVG P+KE V
Sbjct: 246 KPVGHSKGPLLHNPTLRHVNFNGIYVPMFVDDLKKFFDVYASPDFAGYSVGFPYKEAVVQ 305
Query: 305 CCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALRERQGINGVASHTSP 364
CDEVHPLAK IGAVNTIIRRP DGKL+GYNTDCE +I+AIEDALR+++ +NG S SP
Sbjct: 306 FCDEVHPLAKCIGAVNTIIRRPCDGKLIGYNTDCEGSITAIEDALRDQKYVNG-RSLNSP 364
Query: 365 IAGKIFVLVGAGGAGRALAFGAKSRGARVIIFNRNYERAKALADAVSGEALHFEYLHEFF 424
+AGK FV+VGAGGAGRA+A GAKSRGAR+IIF+ + ERAK+LA AVSGEA HFE L F
Sbjct: 365 LAGKQFVVVGAGGAGRAIAVGAKSRGARLIIFDIDLERAKSLARAVSGEAQHFESLAHFQ 424
Query: 425 PEKGMILANASAIGMEPNSDQSPVPKEALKAYELVFDAVYTPRNTRLLREAAEVGATVVS 484
PE G ILANA+ IGM P++D+ P +E L Y+LVFDAVYTPR TRLL++A GA VS
Sbjct: 425 PENGAILANATPIGMHPSTDRIPAAEETLGNYQLVFDAVYTPRKTRLLKDADAAGAITVS 484
Query: 485 GVEMFIRQALGQFRLFTGGLAPEDFMRKLVLEQF 518
GVEMF+RQA+GQF LFTG AP+DFMR++VL +F
Sbjct: 485 GVEMFLRQAIGQFNLFTGREAPKDFMREIVLAKF 518
>gi|225451144|ref|XP_002270055.1| PREDICTED: bifunctional 3-dehydroquinate dehydratase/shikimate
dehydrogenase, chloroplastic [Vitis vinifera]
gi|298204989|emb|CBI34296.3| unnamed protein product [Vitis vinifera]
Length = 519
Score = 548 bits (1412), Expect = e-153, Method: Compositional matrix adjust.
Identities = 285/514 (55%), Positives = 384/514 (74%), Gaps = 3/514 (0%)
Query: 6 KNSLLVCTQLECETTEEMQASIEQAKVEGADLVELCIDSME-FSHISEVDKLIQHPTLPA 64
K ++CT L ++ E+M + +AKVEGADLVE+ +D + F +++ ++++ LP
Sbjct: 8 KKETMICTPLMGQSVEQMVRDMHKAKVEGADLVEVRLDYINNFHPQQDLEIILRNKPLPV 67
Query: 65 IVSYRLKSSRKSSDEACKNTCLQVLRRALDLDVEFVEMDYEVASDPLMSEIIYSRSNTKI 124
++ YR K E +++ L+ L A L ++++ + +VASD L + + S+++
Sbjct: 68 MIVYRPKW-EGGQYEGDEHSRLEALHLAEKLGADYIDFELKVASDFLGKQKMDQHSSSRT 126
Query: 125 IVSSYLNGGGKPTTEKLGDVIACMQATGADVMKLEIAVDSITDLAPVFEMLTHCQVPLIA 184
IVS Y++G P E L +A +Q+TGAD++KL I +IT++ +F +L+HCQ+PLIA
Sbjct: 127 IVSCYVDGV-TPPIEDLICRVALLQSTGADMIKLVINATNITEITKIFHLLSHCQMPLIA 185
Query: 185 LAVGSRGLISQLLGPKFGGFLVYGSLGGKSVPGLPTLVSLKQVYQLEHINPDTKIFGLVS 244
++G RG +SQ+L KFGGFLVYGS+ G V GLPTL SL++ Y++++IN DTK+FGL+S
Sbjct: 186 YSIGDRGFMSQILCRKFGGFLVYGSMEGSPVAGLPTLESLREAYKVQYINKDTKVFGLIS 245
Query: 245 NPVGHSKGPILHNPAFRHTRFNGIYVPMLVDDVKEFFRTYSGTDFAGFSVGIPHKEPAVA 304
PVGHSKGPILHNPAFRH +NGIYVPMLVDD+KEFF YS DFAGFSVGIP+KE
Sbjct: 246 KPVGHSKGPILHNPAFRHVNYNGIYVPMLVDDLKEFFSIYSSPDFAGFSVGIPYKEAVTG 305
Query: 305 CCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALRERQGINGVASHTSP 364
CDE+HPLA+SIGAVNTI+RRP DGKL+GYNTDCE++I+AIEDALRER NG A SP
Sbjct: 306 FCDELHPLAQSIGAVNTIMRRPSDGKLIGYNTDCEASITAIEDALRERGLPNGEAPLNSP 365
Query: 365 IAGKIFVLVGAGGAGRALAFGAKSRGARVIIFNRNYERAKALADAVSGEALHFEYLHEFF 424
+ GK FVLVGAGGAGRALAFGA+SRGA+++IF+ +++RA +LA AVSGE +E + F
Sbjct: 366 LTGKQFVLVGAGGAGRALAFGARSRGAQLVIFDLDFDRANSLAHAVSGEVKLYEDVANFQ 425
Query: 425 PEKGMILANASAIGMEPNSDQSPVPKEALKAYELVFDAVYTPRNTRLLREAAEVGATVVS 484
PEKG ILANA+ +GM PN+D+ PV +E L Y+LVFD+VYTPR TRLL+EA GA +VS
Sbjct: 426 PEKGAILANATPVGMHPNTDRIPVAEETLSDYQLVFDSVYTPRKTRLLKEAEAAGAIIVS 485
Query: 485 GVEMFIRQALGQFRLFTGGLAPEDFMRKLVLEQF 518
GVEMF+RQA+GQF LFTGG APE+FMR+++L +F
Sbjct: 486 GVEMFLRQAIGQFNLFTGGEAPEEFMREIILSKF 519
>gi|57920902|gb|AAS90324.2| 3-dehydroquinate dehydratase / shikimate dehydrogenase isoform 2
[Nicotiana tabacum]
Length = 521
Score = 547 bits (1409), Expect = e-153, Method: Compositional matrix adjust.
Identities = 292/516 (56%), Positives = 375/516 (72%), Gaps = 5/516 (0%)
Query: 6 KNSLLVCTQLECETTEEMQASIEQAKVEGADLVELCIDSME-FSHISEVDKLIQHPTLPA 64
KNS +VC L + E++ + QAK +GADLVE+ +D + F ++ L+ + LP
Sbjct: 8 KNSAMVCAPLMAPSVEQLVHGMLQAKAQGADLVEIRLDGINNFQPQKDLQVLLNNNPLPV 67
Query: 65 IVSYR--LKSSRKSSDEACKNTCLQVLRRALDLDVEFVEMDYEVASDPLMSEIIYSRSNT 122
++ YR + + D+ + L+VLR A +L +++E+D ++ASD E S
Sbjct: 68 LIVYRPIWEGNEFEEDDDHIHKQLEVLRWAKELGADYIELDLKIASDFTKKEKPRWSSGC 127
Query: 123 KIIVSSYLNGGGKPTTEKLGDVIACMQATGADVMKLEIAVDSITDLAPVFEMLTHCQVPL 182
K+I S +++ + E L V+A MQ+TGAD++K+ + IT+L +F +L+HCQVPL
Sbjct: 128 KVIASCFVDN--VTSKEDLSQVVAHMQSTGADILKIVTNANDITELEKMFHLLSHCQVPL 185
Query: 183 IALAVGSRGLISQLLGPKFGGFLVYGSLGGKSVPGLPTLVSLKQVYQLEHINPDTKIFGL 242
IA ++G RGLISQLLGPKFG LVYGSL +VPGLPTL SL+Q Y ++ ++ DTK+FGL
Sbjct: 186 IAYSLGERGLISQLLGPKFGSVLVYGSLDCNAVPGLPTLGSLRQAYGVDFMDTDTKVFGL 245
Query: 243 VSNPVGHSKGPILHNPAFRHTRFNGIYVPMLVDDVKEFFRTYSGTDFAGFSVGIPHKEPA 302
+S PVGHSKGPILHNP FRH +NGIYVPM VDD+KEFFR YS DFAGFSVGIP+KE
Sbjct: 246 ISKPVGHSKGPILHNPTFRHVGYNGIYVPMFVDDLKEFFRVYSSPDFAGFSVGIPYKEAV 305
Query: 303 VACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALRERQGINGVASHT 362
V+ CDEV PLAKSIGAVNTII+RP DGKL+GYNTDCE++I+AIEDAL+ NG A
Sbjct: 306 VSFCDEVDPLAKSIGAVNTIIQRPCDGKLIGYNTDCEASITAIEDALKVNGLTNGAAFLP 365
Query: 363 SPIAGKIFVLVGAGGAGRALAFGAKSRGARVIIFNRNYERAKALADAVSGEALHFEYLHE 422
SP+AGK+FVLVGAGGAGRALAFGAKSR A ++IF+ +++RAKALA AVSGEAL FE L
Sbjct: 366 SPLAGKLFVLVGAGGAGRALAFGAKSRRAEIVIFDIDFDRAKALAAAVSGEALPFENLAS 425
Query: 423 FFPEKGMILANASAIGMEPNSDQSPVPKEALKAYELVFDAVYTPRNTRLLREAAEVGATV 482
F PEKG ILANA+ IGM PN D+ PV + +LK Y +VFDAVYTPR T LL++A GA
Sbjct: 426 FQPEKGAILANATPIGMHPNKDRIPVSEASLKDYVVVFDAVYTPRKTTLLKDAEAAGAIT 485
Query: 483 VSGVEMFIRQALGQFRLFTGGLAPEDFMRKLVLEQF 518
VSGVEMF+RQA+GQF LFT APE+FMR +V+ +F
Sbjct: 486 VSGVEMFLRQAIGQFHLFTRTKAPEEFMRDIVMAKF 521
>gi|224125426|ref|XP_002319583.1| dehydroquinate dehydratase/ shikimate dehydrogenase [Populus
trichocarpa]
gi|222857959|gb|EEE95506.1| dehydroquinate dehydratase/ shikimate dehydrogenase [Populus
trichocarpa]
Length = 518
Score = 547 bits (1409), Expect = e-153, Method: Compositional matrix adjust.
Identities = 289/513 (56%), Positives = 381/513 (74%), Gaps = 4/513 (0%)
Query: 7 NSLLVCTQLECETTEEMQASIEQAKVEGADLVELCIDSME-FSHISEVDKLIQHPTLPAI 65
NS +VC L + E+M ++ A+ +GAD VE+ +D + F +++ +I++ LP I
Sbjct: 9 NSTMVCAPLMARSVEQMVIDMQSAEAQGADAVEVRLDYINSFQPSQDLETIIRNKPLPVI 68
Query: 66 VSYRLKSSRKSSDEACKNTCLQVLRRALDLDVEFVEMDYEVASDPLMSEIIYSRSNTKII 125
+ YR + E ++T L+ LR A +L ++++++ +VASD + ++ K+I
Sbjct: 69 IVYRPRW-EGGQYEGDEHTRLEALRLAHELGADYIDVELKVASDLVREVKNKHQTGGKVI 127
Query: 126 VSSYLNGGGKPTTEKLGDVIACMQATGADVMKLEIAVDSITDLAPVFEMLTHCQVPLIAL 185
VSSYL+G P+ E L ++A MQAT AD++K+ + IT+L +F +L+H QVP +A
Sbjct: 128 VSSYLSGA-TPSKEDLSHLVASMQATKADIIKVVSNANDITELDRIFHLLSHMQVPAVAY 186
Query: 186 AVGSRGLISQLLGPKFGGFLVYGSLGGKSVPGLPTLVSLKQVYQLEHINPDTKIFGLVSN 245
++G RGLISQLL PKFGG LVYG++ G S+PGLPTL SL++ Y++E+IN DTK+FGLVS
Sbjct: 187 SLGERGLISQLLCPKFGGALVYGAMEGNSIPGLPTLDSLREAYKVENINSDTKVFGLVSK 246
Query: 246 PVGHSKGPILHNPAFRHTRFNGIYVPMLVDDVKEFFRTYSGTDFAGFSVGIPHKEPAVAC 305
PV HSKGPILHNPAFRH FNGIYVPM VDD+KEFF Y+ DFAG+SVG P+KE V
Sbjct: 247 PVSHSKGPILHNPAFRHANFNGIYVPMFVDDLKEFFEVYASPDFAGYSVGFPYKEAVVQF 306
Query: 306 CDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALRERQGINGVASHTSPI 365
CDEVHPLAKSIGAVNTIIR+P DGKL+GYNTDCE +I++IEDAL++++ ING AS SP+
Sbjct: 307 CDEVHPLAKSIGAVNTIIRKPSDGKLIGYNTDCEGSIASIEDALKDQRYING-ASLNSPL 365
Query: 366 AGKIFVLVGAGGAGRALAFGAKSRGARVIIFNRNYERAKALADAVSGEALHFEYLHEFFP 425
AGK FV+VGAGGAGRA+A GAKSRGARVIIF+ + +RAK+LA VSGEA HF+ L F P
Sbjct: 366 AGKQFVVVGAGGAGRAIAVGAKSRGARVIIFDIDLDRAKSLAQVVSGEAQHFDSLAHFQP 425
Query: 426 EKGMILANASAIGMEPNSDQSPVPKEALKAYELVFDAVYTPRNTRLLREAAEVGATVVSG 485
EKG ILANA+ IGM P++D+ PV + L Y+LVFDAVYTPR TRLL +A GA VSG
Sbjct: 426 EKGAILANATPIGMHPSTDRIPVAEATLGNYQLVFDAVYTPRKTRLLEDADAAGAITVSG 485
Query: 486 VEMFIRQALGQFRLFTGGLAPEDFMRKLVLEQF 518
VEMF++QA+GQF LFTG AP+DFMR++VL +F
Sbjct: 486 VEMFLKQAIGQFSLFTGREAPKDFMREIVLAKF 518
>gi|356504076|ref|XP_003520825.1| PREDICTED: bifunctional 3-dehydroquinate dehydratase/shikimate
dehydrogenase, chloroplastic-like [Glycine max]
Length = 524
Score = 529 bits (1363), Expect = e-147, Method: Compositional matrix adjust.
Identities = 286/519 (55%), Positives = 377/519 (72%), Gaps = 8/519 (1%)
Query: 6 KNSLLVCTQLECE---TTEEMQASIEQAKVEGADLVELCIDSM-EFSHISEVDKLIQHPT 61
K+S++VC + + E++ + QAK EGAD+VEL +D + F ++ ++Q+
Sbjct: 8 KHSVMVCAAITTHQYVSAEQIVNGMHQAKAEGADIVELRLDCITNFHSHHDLKIILQNKP 67
Query: 62 LPAIVSYRLKSSRKSSDEACKNTCLQVLRRALDLDVEFVEMDYEVAS--DPLMSEIIYSR 119
LP ++ R K E +N L+ L+ A++L +F++++ + AS L+ +
Sbjct: 68 LPVLIVNRPKW-EGGLYEGDENKRLEALQLAVELSADFIDVELKAASCLPTLVEHMRNHN 126
Query: 120 SNTKIIVSSYLNGGGKPTTEKLGDVIACMQATGADVMKLEIAVDSITDLAPVFEMLTHCQ 179
S+ KIIVS Y++G P E L ++ MQATGAD++KL IT++ +F + +CQ
Sbjct: 127 SHGKIIVSCYVDGT-TPPHEVLLQLVELMQATGADIIKLVTLAADITEIKRIFSLFLYCQ 185
Query: 180 VPLIALAVGSRGLISQLLGPKFGGFLVYGSLGGKSVPGLPTLVSLKQVYQLEHINPDTKI 239
VPLIA +VG RGLISQLL PKFGGF VYGSL G +PGLP+L S+++ Y+LEH+N DTK+
Sbjct: 186 VPLIAYSVGERGLISQLLSPKFGGFFVYGSLAGNPIPGLPSLDSIQEAYKLEHVNADTKV 245
Query: 240 FGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLVDDVKEFFRTYSGTDFAGFSVGIPHK 299
FGL+S PV HS+GPILHNP+F+ +NGIYVPM VDD+K+FF TY DF+GFSVGIP+K
Sbjct: 246 FGLISKPVSHSRGPILHNPSFKDVNYNGIYVPMFVDDLKKFFSTYPSPDFSGFSVGIPYK 305
Query: 300 EPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALRERQGINGVA 359
E + CDEVHPLA+SIGAVNTIIRRP DGKLVGYNTDCE+AI+AIEDAL E +G A
Sbjct: 306 EEVLRFCDEVHPLAQSIGAVNTIIRRPRDGKLVGYNTDCEAAITAIEDALIEHGCNDGEA 365
Query: 360 SHTSPIAGKIFVLVGAGGAGRALAFGAKSRGARVIIFNRNYERAKALADAVSGEALHFEY 419
S SP+AG++FVLVGAGGAG+ALAFGAKSRGAR++IF+ +++RAK+LA AV GEA F+
Sbjct: 366 SLGSPLAGRLFVLVGAGGAGKALAFGAKSRGARLVIFDIDFDRAKSLACAVFGEAQPFKE 425
Query: 420 LHEFFPEKGMILANASAIGMEPNSDQSPVPKEALKAYELVFDAVYTPRNTRLLREAAEVG 479
L F PEKG ILANA+ +GM PN+D+ PV + L+ Y LVFDAVYTPR TRLL EA G
Sbjct: 426 LVNFQPEKGAILANATPVGMHPNTDRIPVAEATLEDYRLVFDAVYTPRRTRLLNEADAAG 485
Query: 480 ATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRKLVLEQF 518
A V+GVEMF+RQA+GQF LFTG APE+FMR++VL +F
Sbjct: 486 AITVAGVEMFLRQAIGQFNLFTGLEAPEEFMREIVLSKF 524
>gi|224128596|ref|XP_002320371.1| predicted protein [Populus trichocarpa]
gi|222861144|gb|EEE98686.1| predicted protein [Populus trichocarpa]
Length = 337
Score = 528 bits (1359), Expect = e-147, Method: Compositional matrix adjust.
Identities = 279/340 (82%), Positives = 304/340 (89%), Gaps = 3/340 (0%)
Query: 179 QVPLIALAVGSRGLISQLLGPKFGGFLVYGSLGGKSVPGLPTLVSLKQVYQLEHINPDTK 238
Q+PLIALAVGSRGLISQLLGPKFGGFLVYGSL K+VPG+PTL+SL+Q+Y+LE+IN DTK
Sbjct: 1 QIPLIALAVGSRGLISQLLGPKFGGFLVYGSLSDKAVPGMPTLLSLRQIYKLEYINADTK 60
Query: 239 IFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLVDDVKEFFRTYSGTDFAGFSVGIPH 298
+FGL+SNPVGHSKGP+LHNPAFRHT +NGIYVPM VDDVKEFFRTY+ +DFAGFSVGIPH
Sbjct: 61 VFGLISNPVGHSKGPVLHNPAFRHTGYNGIYVPMQVDDVKEFFRTYTSSDFAGFSVGIPH 120
Query: 299 KEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALRERQGINGV 358
KE AV CCDEVHPLAKSIGAVNTI+RRP DGKLVGYNTDC+++ISAIEDAL G +
Sbjct: 121 KEAAVGCCDEVHPLAKSIGAVNTIVRRPTDGKLVGYNTDCDASISAIEDAL---TGTKLI 177
Query: 359 ASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGARVIIFNRNYERAKALADAVSGEALHFE 418
SP++GK FVL+GAGGAGRALAFGAKSRGARVIIFNRNYERA+ALA AVSGEAL +E
Sbjct: 178 ILVPSPLSGKTFVLIGAGGAGRALAFGAKSRGARVIIFNRNYERARALAKAVSGEALPYE 237
Query: 419 YLHEFFPEKGMILANASAIGMEPNSDQSPVPKEALKAYELVFDAVYTPRNTRLLREAAEV 478
L F P GMILANASAIGMEPNSDQSPV KE LKA ELVFDAVYTPRNTRLL+EA EV
Sbjct: 238 SLDRFRPVNGMILANASAIGMEPNSDQSPVSKETLKACELVFDAVYTPRNTRLLQEAKEV 297
Query: 479 GATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRKLVLEQF 518
A VVSGVEMFIRQALGQFRLFTGGLAPE FMRKLVLEQF
Sbjct: 298 VAVVVSGVEMFIRQALGQFRLFTGGLAPEAFMRKLVLEQF 337
>gi|147837952|emb|CAN60563.1| hypothetical protein VITISV_034026 [Vitis vinifera]
Length = 1071
Score = 519 bits (1336), Expect = e-144, Method: Compositional matrix adjust.
Identities = 278/520 (53%), Positives = 371/520 (71%), Gaps = 24/520 (4%)
Query: 6 KNSLLVCTQLECETTEEMQASIEQAKVEGADLVELCIDSME-FSHISEVDKLIQHPTLPA 64
K ++CT L ++ E+M + +AKVEGADLVE+ +D + F +++ ++++ LP
Sbjct: 8 KKETMICTPLMGQSVEQMVRDMHKAKVEGADLVEVRLDYINNFHPQQDLEIILRNKPLPV 67
Query: 65 IVSYRLKSSRKSSDEACKNTCLQVLRRALDLDVEFVEMDYEVASDPLMSEIIYSRSNTKI 124
++ YR K E +++ L+ L A L ++++ + +VASD L + + S+++
Sbjct: 68 MIVYRPKW-EGGQYEGDEHSRLEALHLAEKLGADYIDFELKVASDFLGKQKMDQHSSSRT 126
Query: 125 IVSSYLNGGGKPTTEKLGDVIACMQATGADVMKLEIAVDSITDLAPVFEMLTHCQVPLIA 184
IVS Y++G P E L +A +Q+TGAD++KL I +IT++ +F +L+HCQ+PLIA
Sbjct: 127 IVSCYVDGV-TPPIEDLICRVALLQSTGADMIKLVINATNITEITKIFHLLSHCQMPLIA 185
Query: 185 LAVGSRGLISQLLGPKFGGFLVYGSLGGKSVPGLPTLVSLKQVYQLEHINPDTKIFGLVS 244
++G RG +SQ+L KFGGFLVYGS+ G V GLPTL SL++ Y++++IN DTK+FGL+S
Sbjct: 186 YSIGDRGFMSQILCRKFGGFLVYGSMEGSPVAGLPTLESLREAYKVQYINKDTKVFGLIS 245
Query: 245 NPVGHSKGPILHNPAFRHTRFNGIYVPMLVDDVKEFFRTYSGTDFAGFSVGIPHKEPAVA 304
PVGHSKGPILHNPAFRH +NGIYVPMLVDD+KEFF YS DFAGFSVGIP+KE
Sbjct: 246 KPVGHSKGPILHNPAFRHVNYNGIYVPMLVDDLKEFFSIYSSPDFAGFSVGIPYKEAVTG 305
Query: 305 CCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALRERQGINGVASHTSP 364
CDE+HPLA+SIGAVNTI+RRP DGKL+GYNTDCE++I+AIEDALRER NG A SP
Sbjct: 306 FCDELHPLAQSIGAVNTIMRRPSDGKLIGYNTDCEASITAIEDALRERGLPNGEAPLNSP 365
Query: 365 IAGKIFVLVGAGGAGRALAFGAKSRGARVIIFNRNYE---------------------RA 403
+ GK FVLVGAGGAGRALAFGA+SRGA+++IF+ ++E RA
Sbjct: 366 LTGKQFVLVGAGGAGRALAFGARSRGAQLVIFDLDFEKSIPGRITALLSNLHCSSPKDRA 425
Query: 404 KALADAVSGEALHFEYLHEFFPEKGMILANASAIGMEPNSDQSPVPKEALKAYELVFDAV 463
+LA AVSGE +E + F PEKG ILANA+ +GM PN+D+ PV +E L Y+LVFD+V
Sbjct: 426 NSLAHAVSGEVKLYEDVANFQPEKGAILANATPVGMHPNTDRIPVAEETLSDYQLVFDSV 485
Query: 464 YTPRNTRLLREAAEVGATVVSGVEMFIRQALGQFRLFTGG 503
YTPR TRLL+EA GA +VSGVEMF+RQA+GQF LFTGG
Sbjct: 486 YTPRKTRLLKEAEAAGAIIVSGVEMFLRQAIGQFNLFTGG 525
Score = 469 bits (1208), Expect = e-129, Method: Compositional matrix adjust.
Identities = 245/516 (47%), Positives = 341/516 (66%), Gaps = 17/516 (3%)
Query: 7 NSLLVCTQLECETTEEMQASIEQAKVEGADLVELCIDSME-FSHISEVDKLIQHPTLPAI 65
N +CT L T E+M + +AK GAD+VE+ +D + FS ++ LI+ LP +
Sbjct: 561 NPTFLCTPLMGTTVEQMLTEMRKAKEIGADIVEIRLDCLRNFSPAQDLQILIKQSPLPTL 620
Query: 66 VSYR--LKSSRKSSDEACKNTCLQVLRRALDLDVEFVEMDYEVASDPLMSEIIYSR--SN 121
V+YR + + DE N LR A++L +++++ EVA + + IY + N
Sbjct: 621 VTYRPIWEGGQYEGDE---NKRQDALRLAMELGASYIDVELEVAHE--FNNSIYGKKPQN 675
Query: 122 TKIIVSSYLNGGGKPTTEKLGDVIACMQATGADVMKLEIAVDSITDLAPVFEMLTHCQVP 181
K+IVSS+ N P+TE +G+++A +QA+GAD++K+ ITD+A V ++ H QVP
Sbjct: 676 FKVIVSSH-NFHNTPSTEAIGNLVARIQASGADIVKIATTALDITDVARVLQVTVHSQVP 734
Query: 182 LIALAVGSRGLISQLLGPKFGGFLVYGSL--GGKSVPGLPTLVSLKQVYQLEHINPDTKI 239
IA+ +G RGLIS+LL PKFGG+L YG+L G S PG PT L +Y I PDTK+
Sbjct: 735 TIAIVMGERGLISRLLSPKFGGYLTYGALEAGAISAPGQPTAKDLLDLYNFRLIKPDTKV 794
Query: 240 FGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLVDDVKEFFRTYSGTDF-AGFSVGIPH 298
+G++ PVGHSK P+L N AF+ N +YV +LVDDV++FF TYS DF +G S IPH
Sbjct: 795 YGIIGKPVGHSKSPLLFNAAFKKVGLNAVYVHLLVDDVEKFFNTYSAPDFISGCSCTIPH 854
Query: 299 KEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALRERQGINGV 358
KE A+ C D + P+A+ IGA+N I+R+P DGKL +NTD AI AIED LRE G +
Sbjct: 855 KEVAIKCMDTIDPIARKIGAINNIVRKP-DGKLTAFNTDYIGAIEAIEDGLRESNGSSPA 913
Query: 359 ASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGARVIIFNRNYERAKALADAVSGEALHFE 418
SP+AGK+FV++GAGGAG++LA+GAK +GARV++ NR +ERAK LAD V G+AL
Sbjct: 914 VG--SPLAGKLFVVLGAGGAGKSLAYGAKEKGARVVVANRTFERAKDLADKVGGQALTLA 971
Query: 419 YLHEFFPEKGMILANASAIGMEPNSDQSPVPKEALKAYELVFDAVYTPRNTRLLREAAEV 478
+ F PE+GMILAN +++GM+P + +P+PK ALK Y LVFDA+YTP++TRLLREA E
Sbjct: 972 EIENFHPEEGMILANTTSVGMKPKINDTPIPKHALKHYSLVFDAIYTPKDTRLLREAKES 1031
Query: 479 GATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRKLV 514
G +V G EM IRQ Q++ FTG APE+ R+L+
Sbjct: 1032 GKIIVYGTEMLIRQGFEQYKNFTGLPAPEELFRELM 1067
>gi|148906893|gb|ABR16592.1| unknown [Picea sitchensis]
gi|148907829|gb|ABR17039.1| unknown [Picea sitchensis]
Length = 518
Score = 516 bits (1328), Expect = e-143, Method: Compositional matrix adjust.
Identities = 278/519 (53%), Positives = 371/519 (71%), Gaps = 6/519 (1%)
Query: 1 MEVAAKNSLLVCTQLECETTEEMQASIEQAKVEGADLVELCIDSME-FSHISEVDKLIQH 59
M +N L+C L ++ EEM + +E A++ GAD VEL ID + F+ ++D L++
Sbjct: 1 MAEKVQNDCLLCIPLVGQSMEEMLSQMELARIHGADCVELRIDHVRNFNPRVDLDTLLKA 60
Query: 60 PTLPAIVSYRLKSSRKSSDEACKNTCLQVLRRALDLDVEFVEMDYEVASDPLMSEIIYSR 119
T+PAIV+YR K + E + L VLR A++L ++++++ +VASD + S R
Sbjct: 61 RTMPAIVTYRPKWE-GGAYEGDEGKRLDVLRLAMELGADYIDVELQVASDFIKSISNKKR 119
Query: 120 SNTKIIVSSYLNGGGKPTTEKLGDVIACMQATGADVMKLEIAVDSITDLAPVFEMLTHCQ 179
N+KIIVS++ N P+ E LG ++A +Q+TGAD++K+ ITD+A +F +L +CQ
Sbjct: 120 ENSKIIVSNH-NYQFTPSLEDLGLLVARIQSTGADIVKIATTATDITDVARIFRVLAYCQ 178
Query: 180 VPLIALAVGSRGLISQLLGPKFGGFLVYGSL--GGKSVPGLPTLVSLKQVYQLEHINPDT 237
VP++AL + RGLIS+LL PKFGG+L +GSL G +S PG TL + +Y++ + DT
Sbjct: 179 VPILALVMSERGLISRLLCPKFGGYLTFGSLEAGKESAPGQATLADMLNIYKIRGLGRDT 238
Query: 238 KIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLVDDVKEFFRTYSGTDFAGFSVGIP 297
K+FGL+ NPV HSKGP LHN AF F+ IYVP LVDD+KEF + YS DFAGFSV IP
Sbjct: 239 KVFGLIGNPVSHSKGPTLHNRAFGEIGFDAIYVPFLVDDIKEFLKVYSSPDFAGFSVTIP 298
Query: 298 HKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALRERQGING 357
HKE A+ CCDEV P+A+SIGAVNTI+RR DGKL+GYNTD AISAIEDAL+ + G
Sbjct: 299 HKEAALECCDEVDPIARSIGAVNTIVRRQSDGKLIGYNTDSVGAISAIEDALKGKHNY-G 357
Query: 358 VASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGARVIIFNRNYERAKALADAVSGEALHF 417
+H+SP+AGK+F++VGAGGAG+ALAFGAK +GARV+I NRNYERAKALA V GEA+
Sbjct: 358 DWTHSSPLAGKLFLIVGAGGAGKALAFGAKQKGARVVIANRNYERAKALAIQVEGEAIPL 417
Query: 418 EYLHEFFPEKGMILANASAIGMEPNSDQSPVPKEALKAYELVFDAVYTPRNTRLLREAAE 477
+ L F PE GMILAN +++GM PN Q+P+ KEAL +Y +VFDAVYTP+ TRLL++A
Sbjct: 418 DKLDHFRPETGMILANTTSMGMHPNVSQTPISKEALSSYAVVFDAVYTPKWTRLLQDAEA 477
Query: 478 VGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRKLVLE 516
GA VV G+EMFIRQA+GQF LFTG APE MR++VL+
Sbjct: 478 TGALVVCGLEMFIRQAMGQFELFTGCKAPEKLMREIVLK 516
>gi|356573042|ref|XP_003554674.1| PREDICTED: LOW QUALITY PROTEIN: bifunctional 3-dehydroquinate
dehydratase/shikimate dehydrogenase, chloroplastic-like
[Glycine max]
Length = 524
Score = 487 bits (1254), Expect = e-135, Method: Compositional matrix adjust.
Identities = 273/519 (52%), Positives = 360/519 (69%), Gaps = 8/519 (1%)
Query: 6 KNSLLVC---TQLECETTEEMQASIEQAKVEGADLVELCIDSM-EFSHISEVDKLIQHPT 61
K+S++VC T + + E++ + QAK E AD+VE+ +D + F E+ ++Q+
Sbjct: 8 KHSVMVCAPITTQQSVSVEQIANDMYQAKAEDADIVEVRLDCITNFHPXHELKTILQNKP 67
Query: 62 LPAIVSYRLKSSRKSSDEACKNTCLQVLRRALDLDVEFVEMDYEVAS--DPLMSEIIYSR 119
LP ++ + K E +N L+ L+ A++L +F+E+ + AS L+
Sbjct: 68 LPVLIVNQPKW-EGGLYEGDENMQLEALQLAVELGADFIEVQLKAASCLPTLVEHKRNHN 126
Query: 120 SNTKIIVSSYLNGGGKPTTEKLGDVIACMQATGADVMKLEIAVDSITDLAPVFEMLTHCQ 179
S+ KIIVS Y++G P E+L ++ MQ T AD++KL IT++ +F + +CQ
Sbjct: 127 SHGKIIVSCYVDGI-IPPQEELLQLVELMQGTEADIIKLVTHAADITEIIKIFSLFPYCQ 185
Query: 180 VPLIALAVGSRGLISQLLGPKFGGFLVYGSLGGKSVPGLPTLVSLKQVYQLEHINPDTKI 239
VPLIA +VG RGLISQLL KFGGF VY SL G +PGLP+L ++++ Y+LEH+ DTK+
Sbjct: 186 VPLIAYSVGERGLISQLLSQKFGGFFVYESLAGNPIPGLPSLDNIQEAYKLEHVKADTKV 245
Query: 240 FGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLVDDVKEFFRTYSGTDFAGFSVGIPHK 299
FGL+S P+ HSKGPILHNP FRH +NGIYVPM VDD+KEFF TY DF+GF VGIP+K
Sbjct: 246 FGLISKPISHSKGPILHNPPFRHINYNGIYVPMFVDDLKEFFNTYPCPDFSGFIVGIPYK 305
Query: 300 EPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALRERQGINGVA 359
E + CDEVHPLA+SIGAVNTIIRR GKLVGYNT CE+AI+AIEDAL E +G A
Sbjct: 306 EEILRFCDEVHPLAQSIGAVNTIIRRARHGKLVGYNTHCEAAITAIEDALIEHGCNDGGA 365
Query: 360 SHTSPIAGKIFVLVGAGGAGRALAFGAKSRGARVIIFNRNYERAKALADAVSGEALHFEY 419
S SP+AG++FVLVGAGGAG ALAFG+KSRGA ++IF+ N++RAK+LA AV GEA F+
Sbjct: 366 SLGSPLAGRLFVLVGAGGAGIALAFGSKSRGALLVIFDINFDRAKSLACAVFGEAQPFKE 425
Query: 420 LHEFFPEKGMILANASAIGMEPNSDQSPVPKEALKAYELVFDAVYTPRNTRLLREAAEVG 479
L F PEK ILANA+ +GM PN+D+ PV + L+ LVFDAVY R TRLL+EA G
Sbjct: 426 LVNFQPEKEAILANATPVGMLPNTDRIPVAEATLEDXRLVFDAVYRLRRTRLLKEADAAG 485
Query: 480 ATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRKLVLEQF 518
A V GVEMF+RQA+GQF LFT APE+FMR++VL +F
Sbjct: 486 AITVGGVEMFLRQAIGQFNLFTSLEAPEEFMREIVLSKF 524
>gi|356495945|ref|XP_003516831.1| PREDICTED: bifunctional 3-dehydroquinate dehydratase/shikimate
dehydrogenase, chloroplastic-like [Glycine max]
Length = 527
Score = 486 bits (1250), Expect = e-134, Method: Compositional matrix adjust.
Identities = 258/512 (50%), Positives = 360/512 (70%), Gaps = 7/512 (1%)
Query: 6 KNSLLVCTQLECETTEEMQASIEQAKVEGADLVELCIDSME-FSHISEVDKLIQHPTLPA 64
KN+ L+C + E+ E+M+ +++AK GADLVE+ +DS++ F +++ IQH +LP
Sbjct: 17 KNATLICVPIMGESVEKMEIDVDKAKAGGADLVEIRLDSLKTFDPYRDLNAFIQHRSLPL 76
Query: 65 IVSYRLKSSRKSSDEACKNTCLQVLRRALDLDVEFVEMDYEVASDPLMSEIIYSRSNTKI 124
+ +YR K D +N L LR A++L ++++++ +VA + S + + TK+
Sbjct: 77 LFTYRPKWEGGMYD-GDENKRLDALRLAMELGADYIDIELQVAHEFYDSIRGKTFNKTKV 135
Query: 125 IVSSYLNGGGKPTTEKLGDVIACMQATGADVMKLEIAVDSITDLAPVFEMLTHCQVPLIA 184
IVSS+ N P+ E LG+++A +QATGAD++K+ ITD+A +F+++ H QVP I
Sbjct: 136 IVSSH-NYQLTPSIEDLGNLVARIQATGADIVKIATTALDITDVARMFQIMVHSQVPFIG 194
Query: 185 LAVGSRGLISQLLGPKFGGFLVYGSL--GGKSVPGLPTLVSLKQVYQLEHINPDTKIFGL 242
L +G RGLIS++L KFGG+L +G+L G S PG PTL L +Y L + PDTK+FG+
Sbjct: 195 LVMGDRGLISRILSAKFGGYLTFGTLESGVVSAPGQPTLKDLLYLYNLRQLAPDTKVFGI 254
Query: 243 VSNPVGHSKGPILHNPAFRHTRFNGIYVPMLVDDVKEFFRTYSGTDFAGFSVGIPHKEPA 302
+ PVGHSK PIL N F+ NG+Y+ +LVDD+ F RTYS TDF GFSV IPHKE A
Sbjct: 255 IGKPVGHSKSPILFNEVFKSIGLNGVYLFLLVDDLANFLRTYSSTDFVGFSVTIPHKETA 314
Query: 303 VACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALRERQGINGVASHT 362
+ CCDEV P+AKSIGAVN I+RRP DGKL+GYNTD AI+AIE+ LR + NG ++
Sbjct: 315 LKCCDEVDPVAKSIGAVNCIVRRPTDGKLIGYNTDYVGAITAIENGLRGKH--NGSSTTI 372
Query: 363 SPIAGKIFVLVGAGGAGRALAFGAKSRGARVIIFNRNYERAKALADAVSGEALHFEYLHE 422
SP+AGK+FV++GAGGAG+ALA+GAK++GARV+I NR Y+ A+ LA A+ G+AL L
Sbjct: 373 SPLAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDHARKLAYAIGGDALALADLDN 432
Query: 423 FFPEKGMILANASAIGMEPNSDQSPVPKEALKAYELVFDAVYTPRNTRLLREAAEVGATV 482
+ PE GMILAN ++IGM+P D++PV K ALK Y LVFDAVYTP+ TRLL+EA E GAT+
Sbjct: 433 YHPEDGMILANTTSIGMQPKVDETPVSKHALKYYSLVFDAVYTPKITRLLKEAEESGATI 492
Query: 483 VSGVEMFIRQALGQFRLFTGGLAPEDFMRKLV 514
V+G+EMF+ QA GQ+ FTG AP++ RK++
Sbjct: 493 VTGLEMFMGQAYGQYENFTGLPAPKELFRKIM 524
>gi|302817344|ref|XP_002990348.1| hypothetical protein SELMODRAFT_269650 [Selaginella moellendorffii]
gi|300141910|gb|EFJ08617.1| hypothetical protein SELMODRAFT_269650 [Selaginella moellendorffii]
Length = 536
Score = 483 bits (1243), Expect = e-133, Method: Compositional matrix adjust.
Identities = 269/519 (51%), Positives = 361/519 (69%), Gaps = 20/519 (3%)
Query: 6 KNSLLVCTQLECETTEEMQASIEQAKVEGADLVELCIDSME-FSHISEVDKLIQHPTLPA 64
+N ++C L E+ EEM I+ AK GAD+VEL +D + F ++ +LI+ LP
Sbjct: 23 QNGTMLCAPLVAESVEEMLHQIKAAKASGADVVELRVDYINSFQPRVDLPRLIEGRVLPV 82
Query: 65 IVSYR--LKSSRKSSDEACKNTCLQVLRRALDLDVEFVEMDYEVASDPL-MSEIIYSRSN 121
I++YR + DEA + L + A++L +F++++ +VA D + S S+
Sbjct: 83 IITYRPNWEGGLYEGDEAARVAALSL---AIELQADFIDVELQVAEDFIASQSSKRSSSS 139
Query: 122 TKIIVSSYLNGGGKPTTEKLGDVIACMQATGADVMKLEIAVDSITDLAPVFEMLTHCQ-- 179
T+IIVS++ N P++E++G ++A MQATGAD++K +++ D A VF +L H Q
Sbjct: 140 TRIIVSNH-NYHTTPSSEEIGRLVARMQATGADIIKFVTTANNVVDSANVFRVLAHTQLS 198
Query: 180 --VPLIALAVGSRGLISQLLGPKFGGFLVYGSL--GGKSVPGLPTLVSLKQVYQLEHINP 235
VP IAL +G +GLIS+LL PKFGGFL +G+L G +S PG PTL L + Y+L ++
Sbjct: 199 LKVPTIALVMGQKGLISRLLSPKFGGFLTFGTLSSGKESAPGQPTLTDLVRTYRLREMDC 258
Query: 236 DTKIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLVDDVKEFFRTYSGTDFAGFSVG 295
DT+++G++ NPVGHSKGP LHNPAF +N +Y+P LVD++ EF YS DF GFSV
Sbjct: 259 DTRVYGIIGNPVGHSKGPYLHNPAFEAIGYNAVYLPFLVDNLAEFLSVYSAPDFGGFSVT 318
Query: 296 IPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALRERQGI 355
IP KE A+ CCDEV AK+IGAVNTIIRR DGK VGYNTDCE+AISAIED +RE G
Sbjct: 319 IPFKEDALKCCDEVESSAKAIGAVNTIIRRA-DGKFVGYNTDCEAAISAIEDGVRE-SGY 376
Query: 356 NGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGARVIIFNRNYERAKALADAVSGEAL 415
+G + P++GK+ V++GAGGAG+ALAFGAK RGARV+I NRN+ERAK LA++V EA+
Sbjct: 377 HG----SQPLSGKLCVVIGAGGAGKALAFGAKHRGARVVIANRNFERAKVLAESVGAEAI 432
Query: 416 HFEYLHEFFPEKGMILANASAIGMEPNSDQSPVPKEALKAYELVFDAVYTPRNTRLLREA 475
E L F PE GMILAN++++GM+PN +P+PK ALK Y +VFDAVYTP TRLLREA
Sbjct: 433 SLETLSSFQPENGMILANSTSVGMQPNVQDTPIPKAALKGYSVVFDAVYTPLETRLLREA 492
Query: 476 AEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRKLV 514
E GA VVSG+EMFIRQA+GQF LFTG AP+ MR++V
Sbjct: 493 KESGAVVVSGLEMFIRQAIGQFELFTGQPAPKSVMREIV 531
>gi|58047529|gb|AAW65140.1| 3-dehydroquinate dehydratase/shikimate 5-dehydrogenase [Juglans
regia]
Length = 508
Score = 481 bits (1238), Expect = e-133, Method: Compositional matrix adjust.
Identities = 257/510 (50%), Positives = 356/510 (69%), Gaps = 11/510 (2%)
Query: 10 LVCTQLECETTEEMQASIEQAKVEGADLVELCIDSME-FSHISEVDKLIQHPTLPAIVSY 68
LVC + E+ ++M ++ +AK ADLVE+ +DS++ F+ +++ +I+ LP + +Y
Sbjct: 2 LVCAPIMAESVDKMVINMNKAKQGDADLVEIRLDSLKSFNPSNDLKTIIKASPLPTLFTY 61
Query: 69 RLKSSRKSSDEACKNTCLQVLRRALDLDVEFVEMDYEVASDPLMSEIIYSRS--NTKIIV 126
R K D K L LR A++ ++++++ +VA + ++ IY R N+K+IV
Sbjct: 62 RPKWEGGQYDGDEKKR-LDALRLAMEFGADYIDVELQVACE--FNDSIYGRKPENSKVIV 118
Query: 127 SSYLNGGGKPTTEKLGDVIACMQATGADVMKLEIAVDSITDLAPVFEMLTHCQVPLIALA 186
SS+ N P+ E LG+++A +QATGAD++K+ I D+A +F++ H QVP+I +
Sbjct: 119 SSH-NYQDTPSAEDLGNLVARIQATGADIVKIATTALEIADVARIFQITVHSQVPIIGIV 177
Query: 187 VGSRGLISQLLGPKFGGFLVYGSL--GGKSVPGLPTLVSLKQVYQLEHINPDTKIFGLVS 244
+G RG +S++L PKFGGFL +G++ G S PG PT+ L +Y L I PDTK+FG++
Sbjct: 178 MGERGFMSRILCPKFGGFLTFGTIESGIVSAPGQPTMKDLLHLYNLRRIGPDTKVFGIIG 237
Query: 245 NPVGHSKGPILHNPAFRHTRFNGIYVPMLVDDVKEFFRTYSGTDFAGFSVGIPHKEPAVA 304
PV HSK PIL+N AF+ FNG+Y+P+LVDD+ F +TYS TDFAGFS IPHKE A+
Sbjct: 238 KPVHHSKSPILYNEAFKSVCFNGVYIPLLVDDIANFLQTYSSTDFAGFSCTIPHKEAALK 297
Query: 305 CCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALRERQGINGVASHTSP 364
CCDEV P+AKSIGAVN IIRRP DGKLVGYNTD AISAIED LR N + SP
Sbjct: 298 CCDEVDPVAKSIGAVNCIIRRPTDGKLVGYNTDYVGAISAIEDGLRGSH--NSSNTADSP 355
Query: 365 IAGKIFVLVGAGGAGRALAFGAKSRGARVIIFNRNYERAKALADAVSGEALHFEYLHEFF 424
+AGK+FV++GAGGAG+ALA+GAK +GARV+I NR Y+RA+ LAD + G+AL L F
Sbjct: 356 LAGKLFVVIGAGGAGKALAYGAKEKGARVVIANRTYDRARELADTIGGDALSLADLDNFH 415
Query: 425 PEKGMILANASAIGMEPNSDQSPVPKEALKAYELVFDAVYTPRNTRLLREAAEVGATVVS 484
PE GMILAN+++IGM+P D++P+PK AL++Y LVFDAVYTP+ TRLLREA E GA +V+
Sbjct: 416 PEDGMILANSTSIGMQPKVDETPIPKHALRSYSLVFDAVYTPKMTRLLREAEESGAKIVT 475
Query: 485 GVEMFIRQALGQFRLFTGGLAPEDFMRKLV 514
G+EMFI QA QF FTG AP++ RK++
Sbjct: 476 GLEMFIGQAYEQFERFTGLPAPKELFRKVM 505
>gi|388521847|gb|AFK48985.1| unknown [Medicago truncatula]
Length = 515
Score = 475 bits (1222), Expect = e-131, Method: Compositional matrix adjust.
Identities = 258/515 (50%), Positives = 359/515 (69%), Gaps = 11/515 (2%)
Query: 7 NSLLVCTQLECETTEEMQASIEQAKVEGADLVELCIDSME-FSHISEVDKLIQ-HPTLPA 64
N+ L+C + ET ++M A I++AK+ GADLVE+ +DS++ F+ +++ +Q H +LP
Sbjct: 2 NATLICVPIMGETIQKMIADIQKAKLNGADLVEIRLDSLKTFNPSQDLNTFMQQHHSLPF 61
Query: 65 IVSYRLKSSRKSSDEACKNTCLQVLRRALDLDVEFVEMDYEVASDPLMSEIIYSRSNTKI 124
+ +YR K E +N L LR A++L+ ++++++ +VA S + + TK+
Sbjct: 62 LFTYRPKW-EGGMYEGDENQRLDALRLAMELEADYIDIELKVAHQFYDSIRGKTYNKTKV 120
Query: 125 IVSSYLNGGGKPTTEKLGDVIACMQATGADVMKLEIAVDSITDLAPVFEMLTHCQV---P 181
IVSS+ N P+ E LG+++A +QATGAD++K+ ITD+A +FE++ H QV P
Sbjct: 121 IVSSH-NYQQTPSVEDLGNLVARIQATGADIVKIATTAVEITDVARMFEIMVHSQVRHVP 179
Query: 182 LIALAVGSRGLISQLLGPKFGGFLVYGSL--GGKSVPGLPTLVSLKQVYQLEHINPDTKI 239
I L +G RGLIS++L KFGG+L +G+L G S PG PTL L +Y I PDTK+
Sbjct: 180 FIGLVMGDRGLISRILCAKFGGYLTFGTLESGVVSAPGQPTLKDLLHLYNFRQIGPDTKV 239
Query: 240 FGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLVDDVKEFFRTYSGTDFAGFSVGIPHK 299
+G+V PV HSK PIL N AF+ F+G++V +LVDD+ F RTYS TDF GFSV IPHK
Sbjct: 240 YGIVGKPVSHSKSPILFNEAFKTIGFDGVFVFLLVDDLANFLRTYSSTDFVGFSVTIPHK 299
Query: 300 EPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALRERQGINGVA 359
E A+ CCDEV P+AKSIGAVN ++RRP DGKL+GYNTD AISAIED LR + +G A
Sbjct: 300 EAALKCCDEVDPVAKSIGAVNCVVRRPTDGKLIGYNTDYVGAISAIEDGLRGKHIDSGTA 359
Query: 360 SHTSPIAGKIFVLVGAGGAGRALAFGAKSRGARVIIFNRNYERAKALADAVSGEALHFEY 419
SP+AGK+FV++GAGGAG+ALA+GAK +GAR++I NR Y+RA+ LAD + G+AL
Sbjct: 360 --VSPLAGKLFVVIGAGGAGKALAYGAKEKGARIVIANRTYDRARELADVIGGDALTLND 417
Query: 420 LHEFFPEKGMILANASAIGMEPNSDQSPVPKEALKAYELVFDAVYTPRNTRLLREAAEVG 479
L + PE GMILAN ++IGM+P D++P+ K ALK Y LVFDAVYTP+ TRLL+EA E G
Sbjct: 418 LDNYHPEDGMILANTTSIGMQPKVDETPISKHALKFYSLVFDAVYTPKMTRLLKEAEESG 477
Query: 480 ATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRKLV 514
AT+V+G+EMFI QA Q+ +TG AP++ RK++
Sbjct: 478 ATIVTGLEMFIGQAYRQYEHYTGLPAPKELFRKIM 512
>gi|359477446|ref|XP_002277395.2| PREDICTED: bifunctional 3-dehydroquinate dehydratase/shikimate
dehydrogenase, chloroplastic-like [Vitis vinifera]
Length = 522
Score = 474 bits (1220), Expect = e-131, Method: Compositional matrix adjust.
Identities = 261/518 (50%), Positives = 356/518 (68%), Gaps = 14/518 (2%)
Query: 5 AKNSLLVCTQLECETTEEMQASIEQAKVEGADLVELCIDSME-FSHISEVDKLIQHPTLP 63
+KNS L+C + ET E+M + +AK GADLVE+ +D+++ F+ +++ LI+ LP
Sbjct: 7 SKNSTLICVPIMGETIEKMVVDMSKAKTSGADLVEVRLDTLKRFNPRQDLEVLIRKCPLP 66
Query: 64 AIVSYRLKSSRKSSDEACKNTCLQVLRRALDLDVEFVEMDYEVASDPLMSEIIYSRS--N 121
+ +YR K E +N+ LR A++L ++V+++ +VA + + S I+ R
Sbjct: 67 TLFTYRPKW-EGGQYEGDENSRRDALRLAMELGADYVDIELKVAHEFINS--IHGRKPEK 123
Query: 122 TKIIVSSYLNGGGKPTTEKLGDVIACMQATGADVMKLEIAVDSITDLAPVFEMLTHCQV- 180
K+IVSS+ N P+ E LG+++ +QATGAD++K+ ITD+A +F++ H QV
Sbjct: 124 FKVIVSSH-NYQNTPSVEDLGNLVVSIQATGADIVKIATTALEITDVARIFQITVHSQVS 182
Query: 181 --PLIALAVGSRGLISQLLGPKFGGFLVYGSL--GGKSVPGLPTLVSLKQVYQLEHINPD 236
P+I L +G RGLIS++L PKF G+L +GSL G S PG PT+ L +Y + PD
Sbjct: 183 SVPVIGLVMGERGLISRILCPKFSGYLTFGSLEPGIVSAPGQPTIKDLLNLYNFRQLGPD 242
Query: 237 TKIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLVDDVKEFFRTYSGTDFAGFSVGI 296
TK+FG++ PV HSK P L+N AF+ FNG+YV +LVDD+ +FF TYS DFAGFS I
Sbjct: 243 TKVFGVIGKPVSHSKSPHLYNEAFKSVGFNGVYVHLLVDDIAKFFHTYSAADFAGFSCTI 302
Query: 297 PHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALRERQGIN 356
PHKE A+ CCDEV P+AKSIGAVN IIRRP DGKL GYNTD AISAIED LR+ I+
Sbjct: 303 PHKEAALKCCDEVSPVAKSIGAVNCIIRRPSDGKLFGYNTDYVGAISAIEDGLRDLHKIS 362
Query: 357 GVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGARVIIFNRNYERAKALADAVSGEALH 416
+ SP+AGK+FV++GAGGAG+ALA+GAK +GARV+I NR Y RA+ LADAV G+AL
Sbjct: 363 STSG--SPLAGKLFVVIGAGGAGKALAYGAKEKGARVVIANRTYARARELADAVGGDALS 420
Query: 417 FEYLHEFFPEKGMILANASAIGMEPNSDQSPVPKEALKAYELVFDAVYTPRNTRLLREAA 476
L+ F PE GMILAN ++IGM+P D++P+ K ALK Y LVFDA+YTP+ TRLLREA
Sbjct: 421 LADLNNFHPENGMILANTTSIGMQPKVDETPISKHALKYYSLVFDAIYTPKITRLLREAQ 480
Query: 477 EVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRKLV 514
E GAT+V+G+EMFI QA QF FTG AP++ ++ +
Sbjct: 481 ESGATIVTGLEMFIGQAYEQFERFTGLPAPKELFKQFI 518
>gi|225451146|ref|XP_002270188.1| PREDICTED: bifunctional 3-dehydroquinate dehydratase/shikimate
dehydrogenase, chloroplastic [Vitis vinifera]
gi|298204990|emb|CBI34297.3| unnamed protein product [Vitis vinifera]
Length = 531
Score = 473 bits (1216), Expect = e-130, Method: Compositional matrix adjust.
Identities = 246/516 (47%), Positives = 342/516 (66%), Gaps = 17/516 (3%)
Query: 7 NSLLVCTQLECETTEEMQASIEQAKVEGADLVELCIDSME-FSHISEVDKLIQHPTLPAI 65
N L+CT L T E+M + +AK GAD+VE+ +D + FS ++ LI+ LP +
Sbjct: 21 NPTLLCTPLMGTTVEQMLTEMRKAKEIGADIVEIRLDCLRNFSPAQDLQILIKQSPLPTL 80
Query: 66 VSYR--LKSSRKSSDEACKNTCLQVLRRALDLDVEFVEMDYEVASDPLMSEIIYSR--SN 121
V+YR + + DE N LR A++L +++++ EVA + + IY + N
Sbjct: 81 VTYRPIWEGGQYEGDE---NKRQDALRLAMELGASYIDVELEVAHE--FNNSIYGKKPQN 135
Query: 122 TKIIVSSYLNGGGKPTTEKLGDVIACMQATGADVMKLEIAVDSITDLAPVFEMLTHCQVP 181
K+IVSS+ N P+TE +G+++A +QA+GAD++K+ ITD+A V ++ H QVP
Sbjct: 136 FKVIVSSH-NFHNTPSTEAIGNLVARIQASGADIVKIATTALDITDVARVLQVTVHSQVP 194
Query: 182 LIALAVGSRGLISQLLGPKFGGFLVYGSL--GGKSVPGLPTLVSLKQVYQLEHINPDTKI 239
IA+ +G RGLIS+LL PKFGG+L YG+L G S PG PT L +Y I PDTK+
Sbjct: 195 TIAIVMGERGLISRLLSPKFGGYLTYGALEAGAISAPGQPTAKDLLDLYNFRLIKPDTKV 254
Query: 240 FGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLVDDVKEFFRTYSGTDF-AGFSVGIPH 298
+G++ PVGHSK P+L N AF+ N +YV +LVDDV++FF TYS DF +G S IPH
Sbjct: 255 YGIIGKPVGHSKSPLLFNAAFKKVGLNAVYVHLLVDDVEKFFNTYSAPDFISGCSCTIPH 314
Query: 299 KEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALRERQGINGV 358
KE A+ C D + P+A+ IGA+N I+R+P DGKL +NTD AI AIED LRE G +
Sbjct: 315 KEVAIKCMDTIDPIARKIGAINNIVRKP-DGKLTAFNTDYIGAIEAIEDGLRESNGSSPA 373
Query: 359 ASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGARVIIFNRNYERAKALADAVSGEALHFE 418
SP+AGK+FV++GAGGAG++LA+GAK +GARV++ NR +ERAK LAD V G+AL
Sbjct: 374 VG--SPLAGKLFVVLGAGGAGKSLAYGAKEKGARVVVANRTFERAKDLADKVGGQALTLA 431
Query: 419 YLHEFFPEKGMILANASAIGMEPNSDQSPVPKEALKAYELVFDAVYTPRNTRLLREAAEV 478
+ F PE+GMILAN +++GM+P + +P+PK ALK Y LVFDA+YTP++TRLLREA E
Sbjct: 432 EIENFHPEEGMILANTTSVGMKPKINDTPIPKHALKHYSLVFDAIYTPKDTRLLREAKES 491
Query: 479 GATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRKLV 514
G +V G EM IRQ Q++ FTG APE+ R+L+
Sbjct: 492 GKIIVYGTEMLIRQGFEQYKNFTGLPAPEELFRELM 527
>gi|302795227|ref|XP_002979377.1| hypothetical protein SELMODRAFT_233322 [Selaginella moellendorffii]
gi|300153145|gb|EFJ19785.1| hypothetical protein SELMODRAFT_233322 [Selaginella moellendorffii]
Length = 498
Score = 471 bits (1212), Expect = e-130, Method: Compositional matrix adjust.
Identities = 265/511 (51%), Positives = 355/511 (69%), Gaps = 24/511 (4%)
Query: 10 LVCTQLECETTEEMQASIEQAKVEGADLVELCIDSME-FSHISEVDKLIQHPTLPAIVSY 68
++C L E+ EEM I+ AK GAD+VEL +D + F ++ +LI+ LP I++Y
Sbjct: 1 MLCAPLVAESVEEMLHQIKAAKASGADVVELRVDYINSFQPGVDLPRLIEGRVLPVIITY 60
Query: 69 R--LKSSRKSSDEACKNTCLQVLRRALDLDVEFVEMDYEVASDPL-MSEIIYSRSNTKII 125
R + DEA + L + A++L +F++++ +VA D + S S+T+II
Sbjct: 61 RPNWEGGLYEGDEAARVAALSL---AIELQADFIDVELQVAEDFIASQSSKRSSSSTRII 117
Query: 126 VSSYLNGGGKPTTEKLGDVIACMQATGADVMKLEIAVDSITDLAPVFEMLTHCQVPLIAL 185
VS++ N P++E++G ++A MQATGAD++K +++ D A VF +L H QVP IAL
Sbjct: 118 VSNH-NYHTTPSSEEIGRLVARMQATGADIIKFVTTANNVVDSANVFRVLAHTQVPTIAL 176
Query: 186 AVGSRGLISQLLGPKFGGFLVYGSL--GGKSVPGLPTLVSLKQVYQLEHINPDTKIFGLV 243
+G +GLIS+LL PKFGGFL +G+L G +S PG PTL L + Y+L ++ DT+++G++
Sbjct: 177 VMGQKGLISRLLSPKFGGFLTFGTLSSGKESAPGQPTLTDLVRTYRLREMDCDTRVYGII 236
Query: 244 SNPVGHSKGPILHNPAFRHTRFNGIYVPMLVDDVKEFFRTYSGTDFAGFSVGIPHKEPAV 303
NPVGHSKGP LHNPAF +N +Y+P LVD++ EF YS DF GFSV IP KE A+
Sbjct: 237 GNPVGHSKGPYLHNPAFEAIGYNAVYLPFLVDNLAEFLSVYSAPDFGGFSVTIPFKEDAL 296
Query: 304 ACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALRERQGINGVASHTS 363
CCDEV AK+IGAVNTIIRR DGK VGYNTDCE+AISAIED +RE G +G +
Sbjct: 297 KCCDEVESSAKAIGAVNTIIRRA-DGKFVGYNTDCEAAISAIEDGVRE-SGYHG----SQ 350
Query: 364 PIAGKIFVLVGAGGAGRALAFGAKSRGARVIIFNRNYERAKALADAVSGEALHFEYLHEF 423
P++GK+ V++GAGGAG+ALAFGAK RGARV+I NRN+ERAK LA++V EA+ E L F
Sbjct: 351 PLSGKLCVVIGAGGAGKALAFGAKHRGARVVIANRNFERAKVLAESVGAEAISLETLSSF 410
Query: 424 FPEKGMILANASAIGMEPNSDQSPVPKEALKAYELVFDAVYTPRNTRLLREAAEVGATVV 483
PE GMILAN++++GM+PN+ ALK Y +VFDAVYTP TRLLREA E GA VV
Sbjct: 411 QPETGMILANSTSVGMQPNA--------ALKGYSVVFDAVYTPLETRLLREAKESGAVVV 462
Query: 484 SGVEMFIRQALGQFRLFTGGLAPEDFMRKLV 514
SG+EMFIRQA+GQF LFTG AP+ MR++V
Sbjct: 463 SGLEMFIRQAIGQFELFTGQPAPKSVMREIV 493
>gi|255542472|ref|XP_002512299.1| shikimate dehydrogenase, putative [Ricinus communis]
gi|223548260|gb|EEF49751.1| shikimate dehydrogenase, putative [Ricinus communis]
Length = 524
Score = 467 bits (1201), Expect = e-129, Method: Compositional matrix adjust.
Identities = 243/513 (47%), Positives = 342/513 (66%), Gaps = 17/513 (3%)
Query: 10 LVCTQLECETTEEMQASIEQAKVEGADLVELCIDSM-EFSHISEVDKLIQHPTLPAIVSY 68
L+CT L T ++M + +A AD+VE+ +D + + +++ LI+ LP +V+Y
Sbjct: 17 LLCTPLMGTTVDQMLLEMRKATEISADVVEIRLDCLRNLNPRQDLEILIKQSPLPTLVTY 76
Query: 69 R--LKSSRKSSDEACKNTCLQVLRRALDLDVEFVEMDYEVASDPLMSEIIYSRS--NTKI 124
R + + DE + LR A+ L +V+++ EVA + + IY + N K+
Sbjct: 77 RPIWEGGQYEGDETKRQ---DALRFAMQLGANYVDVELEVAHE--FNNSIYGKKPDNFKV 131
Query: 125 IVSSYLNGGGKPTTEKLGDVIACMQATGADVMKLEIAVDSITDLAPVFEMLTHCQVPLIA 184
IVSS+ N P++E + +++A +QATGAD++K+ ITD A +F+++ HCQVP+I
Sbjct: 132 IVSSH-NFHNTPSSEAIANLVARIQATGADIVKIATTALDITDCARIFQIMVHCQVPVIG 190
Query: 185 LAVGSRGLISQLLGPKFGGFLVYGSL--GGKSVPGLPTLVSLKQVYQLEHINPDTKIFGL 242
+ +G RGLIS+LL PKFGG+L YG+L G S PG PT L +Y I PDTK++G+
Sbjct: 191 IVMGERGLISRLLSPKFGGYLTYGALEAGAISAPGQPTAKDLLDLYNFRLIRPDTKVYGI 250
Query: 243 VSNPVGHSKGPILHNPAFRHTRFNGIYVPMLVDDVKEFFRTYSGTDFA-GFSVGIPHKEP 301
+ PVGHSK P+L N AF+ N +YV LVDDV++FF TYS DFA G S IPHKE
Sbjct: 251 IGKPVGHSKSPLLFNAAFKSVGLNAVYVHFLVDDVEKFFSTYSSVDFASGCSCTIPHKEV 310
Query: 302 AVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALRERQGINGVASH 361
A+ C DE+ P+AK IGA+N IIRRP D L+ YNTD AI AIED LRE G V +
Sbjct: 311 ALKCMDEIDPIAKKIGAINNIIRRP-DATLMAYNTDYIGAIDAIEDGLRELNG--AVPAG 367
Query: 362 TSPIAGKIFVLVGAGGAGRALAFGAKSRGARVIIFNRNYERAKALADAVSGEALHFEYLH 421
TSP+AGK+FV++GAGGAG++LA+GA +GARV++ NR +ERAK LAD V+G+A+ + +
Sbjct: 368 TSPLAGKLFVVLGAGGAGKSLAYGAAQKGARVVVANRTFERAKELADKVNGQAMTLDEVQ 427
Query: 422 EFFPEKGMILANASAIGMEPNSDQSPVPKEALKAYELVFDAVYTPRNTRLLREAAEVGAT 481
F PE+GM+LAN +++GM+PN D +P+ K ALK Y +VFDA+YTP++TRLLREA E GA
Sbjct: 428 NFHPEEGMVLANTTSVGMKPNIDATPLAKHALKHYCVVFDAIYTPKDTRLLREAKESGAV 487
Query: 482 VVSGVEMFIRQALGQFRLFTGGLAPEDFMRKLV 514
+V G EM IRQ Q++ FTG APE+ R+L+
Sbjct: 488 IVYGTEMLIRQGFEQYKNFTGLPAPEELFRQLM 520
>gi|224107417|ref|XP_002314474.1| dehydroquinate dehydratase/ shikimate dehydrogenase [Populus
trichocarpa]
gi|222863514|gb|EEF00645.1| dehydroquinate dehydratase/ shikimate dehydrogenase [Populus
trichocarpa]
Length = 538
Score = 467 bits (1201), Expect = e-129, Method: Compositional matrix adjust.
Identities = 254/516 (49%), Positives = 354/516 (68%), Gaps = 15/516 (2%)
Query: 6 KNSLLVCTQLECETTEEMQASIEQAKVEGADLVELCIDSM-EFSHISEVDKLIQHPTLPA 64
+N L+CT + ++ ++M + +AK GADLVE+ +DS+ +F+ S++ LI H LP
Sbjct: 28 RNPTLICTPIMADSVDKMAILMAEAKSVGADLVEIRLDSLKDFNPNSDIKTLILHSPLPT 87
Query: 65 IVSYR--LKSSRKSSDEACKNTCLQVLRRALDLDVEFVEMDYEVASDPLMSEIIYSRS-- 120
+ +YR + + + DE + L LR A++L ++++++ +VA + +E++
Sbjct: 88 LFTYRPMWEGGQYNGDEKPR---LDALRLAMELGADYIDVELKVAHE--FNELLRGNKPG 142
Query: 121 NTKIIVSSYLNGGGKPTTEKLGDVIACMQATGADVMKLEIAVDSITDLAPVFEMLTHCQV 180
K+IVSS+ N P+ E+LG+++A +QA GAD++K+ I+D+A +F++ H QV
Sbjct: 143 KCKLIVSSH-NYENTPSVEELGNLVARIQAAGADIVKIATTALDISDVARIFQITVHSQV 201
Query: 181 PLIALAVGSRGLISQLLGPKFGGFLVYGSL--GGKSVPGLPTLVSLKQVYQLEHINPDTK 238
P+I L +G RGLIS++L KFGG+L +G+L G S PG PT+ L +Y I PDTK
Sbjct: 202 PIIGLVMGERGLISRILCAKFGGYLTFGTLESGVVSAPGQPTIKDLLDLYNFRLIGPDTK 261
Query: 239 IFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLVDDVKEFFRTYSGTDFAGFSVGIPH 298
+FG++ PVGHSK P+L N AF+ NG+YV +LVDD+ F +TYS TDFAGFS IPH
Sbjct: 262 VFGIIGKPVGHSKSPVLFNEAFKSVGINGVYVHLLVDDIARFLQTYSSTDFAGFSCTIPH 321
Query: 299 KEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALRERQGINGV 358
KE A CCDEVHP+AKSIGAVN IIRR DGKL GYNTD AISAIE+ LR Q ++
Sbjct: 322 KEDAAKCCDEVHPVAKSIGAVNCIIRRQNDGKLFGYNTDYVGAISAIEEGLRASQNVSNT 381
Query: 359 ASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGARVIIFNRNYERAKALADAVSGEALHFE 418
SP+AGK+FV++GAGGAG+ALA+GAK +GARV+I NR YERAK LAD + G+A+
Sbjct: 382 VG--SPLAGKLFVVIGAGGAGKALAYGAKEKGARVVIANRTYERAKVLADIIGGDAITLA 439
Query: 419 YLHEFFPEKGMILANASAIGMEPNSDQSPVPKEALKAYELVFDAVYTPRNTRLLREAAEV 478
L F PE GMILAN ++IGM+P D++PV K AL++Y LVFDAVYTP+ TRLLREA E
Sbjct: 440 DLENFHPEDGMILANTTSIGMQPKVDETPVSKNALRSYSLVFDAVYTPKITRLLREAEES 499
Query: 479 GATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRKLV 514
GA +V+G+EMFI QA QF FT AP++ +K++
Sbjct: 500 GAKIVTGLEMFIGQAYEQFERFTELPAPKELFQKIM 535
>gi|297736925|emb|CBI26126.3| unnamed protein product [Vitis vinifera]
Length = 495
Score = 463 bits (1191), Expect = e-127, Method: Compositional matrix adjust.
Identities = 253/497 (50%), Positives = 344/497 (69%), Gaps = 11/497 (2%)
Query: 23 MQASIEQAKVEGADLVELCIDSME-FSHISEVDKLIQHPTLPAIVSYRLKSSRKSSDEAC 81
M + +AK GADLVE+ +D+++ F+ +++ LI+ LP + +YR K E
Sbjct: 1 MVVDMSKAKTSGADLVEVRLDTLKRFNPRQDLEVLIRKCPLPTLFTYRPKW-EGGQYEGD 59
Query: 82 KNTCLQVLRRALDLDVEFVEMDYEVASDPLMSEIIYSRS--NTKIIVSSYLNGGGKPTTE 139
+N+ LR A++L ++V+++ +VA + + S I+ R K+IVSS+ N P+ E
Sbjct: 60 ENSRRDALRLAMELGADYVDIELKVAHEFINS--IHGRKPEKFKVIVSSH-NYQNTPSVE 116
Query: 140 KLGDVIACMQATGADVMKLEIAVDSITDLAPVFEMLTHCQVPLIALAVGSRGLISQLLGP 199
LG+++ +QATGAD++K+ ITD+A +F++ H QVP+I L +G RGLIS++L P
Sbjct: 117 DLGNLVVSIQATGADIVKIATTALEITDVARIFQITVHSQVPVIGLVMGERGLISRILCP 176
Query: 200 KFGGFLVYGSL--GGKSVPGLPTLVSLKQVYQLEHINPDTKIFGLVSNPVGHSKGPILHN 257
KF G+L +GSL G S PG PT+ L +Y + PDTK+FG++ PV HSK P L+N
Sbjct: 177 KFSGYLTFGSLEPGIVSAPGQPTIKDLLNLYNFRQLGPDTKVFGVIGKPVSHSKSPHLYN 236
Query: 258 PAFRHTRFNGIYVPMLVDDVKEFFRTYSGTDFAGFSVGIPHKEPAVACCDEVHPLAKSIG 317
AF+ FNG+YV +LVDD+ +FF TYS DFAGFS IPHKE A+ CCDEV P+AKSIG
Sbjct: 237 EAFKSVGFNGVYVHLLVDDIAKFFHTYSAADFAGFSCTIPHKEAALKCCDEVSPVAKSIG 296
Query: 318 AVNTIIRRPIDGKLVGYNTDCESAISAIEDALRERQGINGVASHTSPIAGKIFVLVGAGG 377
AVN IIRRP DGKL GYNTD AISAIED LR+ I+ + SP+AGK+FV++GAGG
Sbjct: 297 AVNCIIRRPSDGKLFGYNTDYVGAISAIEDGLRDLHKISSTSG--SPLAGKLFVVIGAGG 354
Query: 378 AGRALAFGAKSRGARVIIFNRNYERAKALADAVSGEALHFEYLHEFFPEKGMILANASAI 437
AG+ALA+GAK +GARV+I NR Y RA+ LADAV G+AL L+ F PE GMILAN ++I
Sbjct: 355 AGKALAYGAKEKGARVVIANRTYARARELADAVGGDALSLADLNNFHPENGMILANTTSI 414
Query: 438 GMEPNSDQSPVPKEALKAYELVFDAVYTPRNTRLLREAAEVGATVVSGVEMFIRQALGQF 497
GM+P D++P+ K ALK Y LVFDA+YTP+ TRLLREA E GAT+V+G+EMFI QA QF
Sbjct: 415 GMQPKVDETPISKHALKYYSLVFDAIYTPKITRLLREAQESGATIVTGLEMFIGQAYEQF 474
Query: 498 RLFTGGLAPEDFMRKLV 514
FTG AP++ ++ +
Sbjct: 475 ERFTGLPAPKELFKQFI 491
>gi|255551621|ref|XP_002516856.1| shikimate dehydrogenase, putative [Ricinus communis]
gi|223543944|gb|EEF45470.1| shikimate dehydrogenase, putative [Ricinus communis]
Length = 539
Score = 462 bits (1188), Expect = e-127, Method: Compositional matrix adjust.
Identities = 251/512 (49%), Positives = 348/512 (67%), Gaps = 7/512 (1%)
Query: 6 KNSLLVCTQLECETTEEMQASIEQAKVEGADLVELCIDSME-FSHISEVDKLIQHPTLPA 64
KN L+C + ++ ++M ++ +AK GADLVE+ +DS++ F+ ++ LI LP
Sbjct: 29 KNPTLICAPIMADSVDKMLINLVKAKENGADLVEIRLDSLKTFNASDDIKTLITRSPLPT 88
Query: 65 IVSYRLKSSRKSSDEACKNTCLQVLRRALDLDVEFVEMDYEVASDPLMSEIIYSRSNTKI 124
+ +YR K D +N L LR A++L ++++++ +VA S + K+
Sbjct: 89 LFTYRPKWEGGEYD-GDENERLDALRLAMELGADYIDVELKVAHKFNDSIRGNKPAKCKV 147
Query: 125 IVSSYLNGGGKPTTEKLGDVIACMQATGADVMKLEIAVDSITDLAPVFEMLTHCQVPLIA 184
IVSS+ N P+ E LG+++A +QA GAD++K+ ITD+A +F++ H QVP+I
Sbjct: 148 IVSSH-NYHNTPSVEDLGNLVADIQAAGADIVKIATTALDITDVARIFQITVHSQVPIIG 206
Query: 185 LAVGSRGLISQLLGPKFGGFLVYGSL--GGKSVPGLPTLVSLKQVYQLEHINPDTKIFGL 242
+ +G RGLIS++L KFGG+L +G+L G S PG P + L +Y I PDTK++G+
Sbjct: 207 IVMGERGLISRILCAKFGGYLTFGTLESGIVSAPGQPMIKDLLDLYNFRQIGPDTKVYGI 266
Query: 243 VSNPVGHSKGPILHNPAFRHTRFNGIYVPMLVDDVKEFFRTYSGTDFAGFSVGIPHKEPA 302
+ PVGHSK P+L+N AF+ FNG+YV +LVDD+ F +T+S TDFAGFS IPHKE A
Sbjct: 267 IGKPVGHSKSPVLYNEAFKSVGFNGVYVHLLVDDIASFLQTFSSTDFAGFSCTIPHKEAA 326
Query: 303 VACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALRERQGINGVASHT 362
V CCD + +A+SIGAVN IIRR DGKL GYNTD + AI+AIE+ LR Q I+G A
Sbjct: 327 VDCCDGIDSVARSIGAVNCIIRRQRDGKLFGYNTDYDGAITAIEEGLRVSQNISGAAD-- 384
Query: 363 SPIAGKIFVLVGAGGAGRALAFGAKSRGARVIIFNRNYERAKALADAVSGEALHFEYLHE 422
SP+AGK+FV++GAGGAG+ALA+GAK +GA+V+I NR YERAK LADAV G A+ L
Sbjct: 385 SPLAGKLFVVIGAGGAGKALAYGAKQKGAKVVIANRTYERAKGLADAVGGVAIALADLGN 444
Query: 423 FFPEKGMILANASAIGMEPNSDQSPVPKEALKAYELVFDAVYTPRNTRLLREAAEVGATV 482
F PE GM+LAN ++IGM+P +++P+PK AL+ Y LVFDAVYTP+ TRLLREA E GA
Sbjct: 445 FRPESGMVLANTTSIGMQPKVEETPIPKHALRNYSLVFDAVYTPKITRLLREAEESGAAT 504
Query: 483 VSGVEMFIRQALGQFRLFTGGLAPEDFMRKLV 514
VSG+EMFI QA QF FTG AP++ RK++
Sbjct: 505 VSGLEMFIGQAYEQFENFTGLPAPKELFRKIM 536
>gi|225451148|ref|XP_002270232.1| PREDICTED: bifunctional 3-dehydroquinate dehydratase/shikimate
dehydrogenase, chloroplastic-like [Vitis vinifera]
Length = 531
Score = 457 bits (1176), Expect = e-126, Method: Compositional matrix adjust.
Identities = 245/521 (47%), Positives = 348/521 (66%), Gaps = 12/521 (2%)
Query: 2 EVAAKNSLLVCTQLECETTEEMQASIEQAKVEGADLVELCIDSME-FSHISEVDKLIQHP 60
E A +NS L+C + ++ ++M I +AK G DLVE+ +D ++ FS ++ L++
Sbjct: 17 EGARRNSTLICVPIMADSVDQMLGQIRKAKEVGGDLVEIRLDYLKNFSPRQDLQFLVKQS 76
Query: 61 TLPAIVSYR--LKSSRKSSDEACKNTCLQVLRRALDLDVEFVEMDYEVASDPLMSEIIYS 118
LP +V+YR + + DE + L LR A++L ++++++ +VA + + S +
Sbjct: 77 PLPTLVTYRPTWEGGQYDGDEGKR---LDALRLAIELGADYIDVELQVAPEFINSIQGKT 133
Query: 119 RSNTKIIVSSYLNGGGKPTTEKLGDVIACMQATGADVMKLEIAVDSITDLAPVFEMLTHC 178
N KIIVSS+ N P+ E+LG+++A +QATGAD++K+ ITD A +F++L H
Sbjct: 134 SGNVKIIVSSH-NYQNSPSAEELGNLVARIQATGADIVKIATTALDITDCARIFQVLAHS 192
Query: 179 QVPLIALAVGSRGLISQLLGPKFGGFLVYGSL--GGKSVPGLPTLVSLKQVYQLEHINPD 236
QVP I +A+ RGLIS++L KFG +L +GSL G S PG PT+ L +Y I PD
Sbjct: 193 QVPTIGIAMAERGLISRILSAKFGSYLTFGSLEAGVVSAPGQPTVKDLLDLYNFRQIGPD 252
Query: 237 TKIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLVDDVKEFFRTYSGTDFAGFSVGI 296
TK+ G++ P+GHSK P L+N AF+ FNGIY+P+LVD VK F TYS DF G+S I
Sbjct: 253 TKVHGVIGKPIGHSKSPHLYNSAFKSVGFNGIYLPLLVDSVKNFLTTYSSPDFVGYSYTI 312
Query: 297 PHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALRERQGIN 356
PHKE + CCDE+ P+A++IGA++ +IRRP DGKL+GYN D AI+AIE+ LR N
Sbjct: 313 PHKEDGLRCCDEIDPIAQAIGAISCMIRRPADGKLMGYNVDYLGAIAAIEEGLRAS---N 369
Query: 357 GVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGARVIIFNRNYERAKALADAVSGEALH 416
G S SP+AGK+FV++GAGGAG+ALA+G K +GARV++ NR +E+AK LA V GEA+
Sbjct: 370 GTTSVGSPLAGKLFVVIGAGGAGKALAYGGKEKGARVVVANRTFEKAKELASKVGGEAMT 429
Query: 417 FEYLHEFFPEKGMILANASAIGMEPNSDQSPVPKEALKAYELVFDAVYTPRNTRLLREAA 476
L F PE GMILAN +++GM+PN D +P+ K+AL Y LVFDA+YTP+ TRLLREA
Sbjct: 430 LAELENFHPEDGMILANTTSVGMKPNIDNTPLSKKALSRYSLVFDAIYTPKLTRLLREAQ 489
Query: 477 EVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRKLVLEQ 517
E GA +V G EMFI QA QF FTG AP++ +R++++
Sbjct: 490 ESGAIIVYGTEMFINQAFVQFERFTGLPAPKELIREVLVRN 530
>gi|298204991|emb|CBI34298.3| unnamed protein product [Vitis vinifera]
Length = 600
Score = 457 bits (1175), Expect = e-126, Method: Compositional matrix adjust.
Identities = 245/521 (47%), Positives = 348/521 (66%), Gaps = 12/521 (2%)
Query: 2 EVAAKNSLLVCTQLECETTEEMQASIEQAKVEGADLVELCIDSME-FSHISEVDKLIQHP 60
E A +NS L+C + ++ ++M I +AK G DLVE+ +D ++ FS ++ L++
Sbjct: 86 EGARRNSTLICVPIMADSVDQMLGQIRKAKEVGGDLVEIRLDYLKNFSPRQDLQFLVKQS 145
Query: 61 TLPAIVSYR--LKSSRKSSDEACKNTCLQVLRRALDLDVEFVEMDYEVASDPLMSEIIYS 118
LP +V+YR + + DE + L LR A++L ++++++ +VA + + S +
Sbjct: 146 PLPTLVTYRPTWEGGQYDGDEGKR---LDALRLAIELGADYIDVELQVAPEFINSIQGKT 202
Query: 119 RSNTKIIVSSYLNGGGKPTTEKLGDVIACMQATGADVMKLEIAVDSITDLAPVFEMLTHC 178
N KIIVSS+ N P+ E+LG+++A +QATGAD++K+ ITD A +F++L H
Sbjct: 203 SGNVKIIVSSH-NYQNSPSAEELGNLVARIQATGADIVKIATTALDITDCARIFQVLAHS 261
Query: 179 QVPLIALAVGSRGLISQLLGPKFGGFLVYGSL--GGKSVPGLPTLVSLKQVYQLEHINPD 236
QVP I +A+ RGLIS++L KFG +L +GSL G S PG PT+ L +Y I PD
Sbjct: 262 QVPTIGIAMAERGLISRILSAKFGSYLTFGSLEAGVVSAPGQPTVKDLLDLYNFRQIGPD 321
Query: 237 TKIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLVDDVKEFFRTYSGTDFAGFSVGI 296
TK+ G++ P+GHSK P L+N AF+ FNGIY+P+LVD VK F TYS DF G+S I
Sbjct: 322 TKVHGVIGKPIGHSKSPHLYNSAFKSVGFNGIYLPLLVDSVKNFLTTYSSPDFVGYSYTI 381
Query: 297 PHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALRERQGIN 356
PHKE + CCDE+ P+A++IGA++ +IRRP DGKL+GYN D AI+AIE+ LR N
Sbjct: 382 PHKEDGLRCCDEIDPIAQAIGAISCMIRRPADGKLMGYNVDYLGAIAAIEEGLRAS---N 438
Query: 357 GVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGARVIIFNRNYERAKALADAVSGEALH 416
G S SP+AGK+FV++GAGGAG+ALA+G K +GARV++ NR +E+AK LA V GEA+
Sbjct: 439 GTTSVGSPLAGKLFVVIGAGGAGKALAYGGKEKGARVVVANRTFEKAKELASKVGGEAMT 498
Query: 417 FEYLHEFFPEKGMILANASAIGMEPNSDQSPVPKEALKAYELVFDAVYTPRNTRLLREAA 476
L F PE GMILAN +++GM+PN D +P+ K+AL Y LVFDA+YTP+ TRLLREA
Sbjct: 499 LAELENFHPEDGMILANTTSVGMKPNIDNTPLSKKALSRYSLVFDAIYTPKLTRLLREAQ 558
Query: 477 EVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRKLVLEQ 517
E GA +V G EMFI QA QF FTG AP++ +R++++
Sbjct: 559 ESGAIIVYGTEMFINQAFVQFERFTGLPAPKELIREVLVRN 599
>gi|147837950|emb|CAN60561.1| hypothetical protein VITISV_034024 [Vitis vinifera]
Length = 531
Score = 455 bits (1170), Expect = e-125, Method: Compositional matrix adjust.
Identities = 244/521 (46%), Positives = 347/521 (66%), Gaps = 12/521 (2%)
Query: 2 EVAAKNSLLVCTQLECETTEEMQASIEQAKVEGADLVELCIDSME-FSHISEVDKLIQHP 60
E A +NS L+C + ++ ++M I +AK G DLVE+ +D ++ FS ++ L++
Sbjct: 17 EGARRNSTLICVPIMADSVDQMLGQIRKAKEVGGDLVEIRLDYLKNFSPRQDLQFLVKQS 76
Query: 61 TLPAIVSYR--LKSSRKSSDEACKNTCLQVLRRALDLDVEFVEMDYEVASDPLMSEIIYS 118
LP +V+YR + + DE + L LR A++L ++++++ +VA + + S +
Sbjct: 77 PLPTLVTYRPTWEGGQYDGDEGKR---LDALRLAIELGADYIDVELQVAPEFINSIQGKT 133
Query: 119 RSNTKIIVSSYLNGGGKPTTEKLGDVIACMQATGADVMKLEIAVDSITDLAPVFEMLTHC 178
KIIVSS+ N P+ E+LG+++A +QATGAD++K+ ITD A +F++L H
Sbjct: 134 SGKVKIIVSSH-NYQNTPSAEELGNLVARIQATGADIVKIATTALDITDCARIFQVLAHS 192
Query: 179 QVPLIALAVGSRGLISQLLGPKFGGFLVYGSL--GGKSVPGLPTLVSLKQVYQLEHINPD 236
QVP I +A+ RGLIS++L KFG +L +GSL G S PG PT+ L +Y I PD
Sbjct: 193 QVPTIGIAMAERGLISRILSAKFGSYLTFGSLEAGVVSAPGQPTVKDLLDLYNFRQIGPD 252
Query: 237 TKIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLVDDVKEFFRTYSGTDFAGFSVGI 296
TK+ G++ P+GHSK P L+N AF+ FNGIY+P+LVD VK F TYS DF G+S I
Sbjct: 253 TKVHGVIGKPIGHSKSPHLYNSAFKSVGFNGIYLPLLVDSVKNFLTTYSSPDFVGYSYTI 312
Query: 297 PHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALRERQGIN 356
PHKE + CCDE+ P+A++IGA++ +IRRP DGKL+GYN D AI+AIE+ LR N
Sbjct: 313 PHKEDGLRCCDEIDPIAQAIGAISCMIRRPADGKLMGYNVDYLGAIAAIEEGLRAS---N 369
Query: 357 GVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGARVIIFNRNYERAKALADAVSGEALH 416
G S SP+AGK+FV++GAGGAG+ALA+G K +GARV++ NR +E+AK LA V GEA+
Sbjct: 370 GTTSVGSPLAGKLFVVIGAGGAGKALAYGGKEKGARVVVANRTFEKAKELASKVGGEAMT 429
Query: 417 FEYLHEFFPEKGMILANASAIGMEPNSDQSPVPKEALKAYELVFDAVYTPRNTRLLREAA 476
L F PE GMILAN +++GM+PN D +P+ K+AL Y LVFDA+YTP+ TRLLREA
Sbjct: 430 LAELENFHPEDGMILANTTSVGMKPNIDNTPLSKKALSRYSLVFDAIYTPKLTRLLREAQ 489
Query: 477 EVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRKLVLEQ 517
E GA +V G EMFI QA QF FTG AP++ +R++++
Sbjct: 490 ESGAIIVYGTEMFINQAFVQFERFTGLPAPKELIREVLVRN 530
>gi|413916609|gb|AFW56541.1| hypothetical protein ZEAMMB73_391045 [Zea mays]
gi|413916610|gb|AFW56542.1| hypothetical protein ZEAMMB73_391045 [Zea mays]
Length = 534
Score = 452 bits (1162), Expect = e-124, Method: Compositional matrix adjust.
Identities = 260/517 (50%), Positives = 350/517 (67%), Gaps = 15/517 (2%)
Query: 10 LVCTQLECETTEEMQASIEQAKVEGADLVELCIDSME-FSHISEVDKLIQHP-TLPAIVS 67
+VC EM A + A GAD+ EL +D + F+ ++ ++ P LPA+V+
Sbjct: 23 MVCVPATARAPREMAAELAAAAALGADVAELRLDCLAGFAPRRDLPVILAKPRPLPALVT 82
Query: 68 YRLKSSRKSSDEACKNTCLQVLRRALDLDVEFVEMDYEVASDPLMSEIIYSRS--NTKII 125
YR K E + + L A++L E+V+++ +VA D M ++I R N K+I
Sbjct: 83 YRPKWE-GGEYEGDDESRFEALLLAMELGAEYVDVELKVA-DKFM-KLISGRKPDNCKLI 139
Query: 126 VSSYLNGGGKPTTEKLGDVIACMQATGADVMKLEIAVDSITDLAPVFEMLTHCQ---VPL 182
VSS+ N P++E+L +++A +QATGAD++K+ I D+A +F++L HCQ VP+
Sbjct: 140 VSSH-NYETTPSSEELANLVAQIQATGADIVKIATTATEIVDVAKMFQILVHCQEKQVPI 198
Query: 183 IALAVGSRGLISQLLGPKFGGFLVYGSL--GGKSVPGLPTLVSLKQVYQLEHINPDTKIF 240
I L + RG IS++L PK+GGFL +GSL G +S P PT L +Y + I PDTK+F
Sbjct: 199 IGLVMNDRGFISRVLCPKYGGFLTFGSLKKGKESAPAQPTAADLINLYNIRQIGPDTKVF 258
Query: 241 GLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLVDDVKEFFRTYSGTDFAGFSVGIPHKE 300
G++ PVGHSK PILHN AFR FN +YVP LVDD+ +F TYS DFAGFS IPHKE
Sbjct: 259 GIIGKPVGHSKSPILHNEAFRSVGFNAVYVPFLVDDLAKFLDTYSSPDFAGFSCTIPHKE 318
Query: 301 PAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALRERQGINGVAS 360
AV CCDEV P+A+ IGAVNTI+RRP DGKLVGYNTD AISAIED ++ +
Sbjct: 319 AAVRCCDEVDPVARDIGAVNTIVRRP-DGKLVGYNTDYVGAISAIEDGIKASES-EPTDP 376
Query: 361 HTSPIAGKIFVLVGAGGAGRALAFGAKSRGARVIIFNRNYERAKALADAVSGEALHFEYL 420
SP+AG++FV++GAGGAG+ALA+GAK +GARV+I NR + RA+ LA+ + G AL L
Sbjct: 377 DKSPLAGRLFVVIGAGGAGKALAYGAKEKGARVVIANRTFARAQELANLIGGPALTLADL 436
Query: 421 HEFFPEKGMILANASAIGMEPNSDQSPVPKEALKAYELVFDAVYTPRNTRLLREAAEVGA 480
+ PE+GMILAN +AIGM PN +++P+ K+AL++Y +VFDAVYTP+ TRLLREAAE GA
Sbjct: 437 ENYHPEEGMILANTTAIGMHPNVNETPLSKQALRSYAVVFDAVYTPKETRLLREAAECGA 496
Query: 481 TVVSGVEMFIRQALGQFRLFTGGLAPEDFMRKLVLEQ 517
TVVSG+EMFIRQA+GQF FTG AP+ MR +VL +
Sbjct: 497 TVVSGLEMFIRQAMGQFEHFTGMPAPDSLMRDIVLTK 533
>gi|46371086|gb|AAS90325.1| 3-dehydroquinate dehydratase / shikimate dehydrogenase isoform 1
[Nicotiana tabacum]
Length = 569
Score = 451 bits (1161), Expect = e-124, Method: Compositional matrix adjust.
Identities = 246/508 (48%), Positives = 351/508 (69%), Gaps = 18/508 (3%)
Query: 2 EVAAKNSLLVCTQLECETTEEMQASIEQAKVEGADLVELCIDSME-FSHISEVDKLIQHP 60
E +N L+C + +T ++M +++AK+ GADLVE+ +DS++ F+ S++D +I+
Sbjct: 15 EAMTRNETLICAPIMADTVDQMLNLMQKAKISGADLVEVRLDSLKSFNPQSDIDTIIKQS 74
Query: 61 TLPAIVSYR--LKSSRKSSDEACKNTCLQVLRRALDLDVEFVEMDYEVASDPLMSEIIYS 118
LP + +YR + + + DE + L LR A++L ++++++ + A D + + +
Sbjct: 75 PLPTLFTYRPTWEGGQYAGDEVSR---LDALRVAMELGADYIDVELK-AIDEFNTALHGN 130
Query: 119 RS-NTKIIVSSYLNGGGKPTTEKLGDVIACMQATGADVMKLEIAVDSITDLAPVFEMLTH 177
+S K+IVSS+ N P++E+LG+++A +QA+GAD++K I D+A VF++ H
Sbjct: 131 KSAKCKVIVSSH-NYDNTPSSEELGNLVARIQASGADIVKFATTALDIMDVARVFQITVH 189
Query: 178 CQVPLIALAVGSRGLISQLLGPKFGGFLVYGSL--GGKSVPGLPTLVSLKQVYQLEHINP 235
QVP+IA+ +G +GL+S++L PKFGG+L +G+L G S PG PT+ L +Y + P
Sbjct: 190 SQVPIIAMVMGEKGLMSRILCPKFGGYLTFGTLEVGKVSAPGQPTIKDLLNIYNFRQLGP 249
Query: 236 DTKIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLVDDVKEFFRTYSGTDFAGFSVG 295
DT+IFG++ PV HSK P+L+N AFR FNG+Y+P+LVDDV FFRTYS DFAG +V
Sbjct: 250 DTRIFGIIGKPVSHSKSPLLYNEAFRSVGFNGVYMPLLVDDVANFFRTYSSLDFAGSAVT 309
Query: 296 IPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALRERQ-G 354
IPHKE V CCDE++P AK IGAVN ++ R +DGKL G NTD AISAIE+AL+ Q
Sbjct: 310 IPHKEAIVDCCDELNPTAKVIGAVNCVVSR-LDGKLFGCNTDYVGAISAIEEALQGSQPS 368
Query: 355 INGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGARVIIFNRNYERAKALADAVSGEA 414
++G SP+AGK+FV++GAGGAG+ALA+GAK +GARV+I NR YERA+ LAD V G+A
Sbjct: 369 MSG-----SPLAGKLFVVIGAGGAGKALAYGAKEKGARVVIANRTYERARELADVVGGQA 423
Query: 415 LHFEYLHEFFPEKGMILANASAIGMEPNSDQSPVPKEALKAYELVFDAVYTPRNTRLLRE 474
L + L F PE MILAN ++IGM+P D +P+ KEAL+ Y LVFDAVYTP+ TRLLRE
Sbjct: 424 LSLDELSNFHPENDMILANTTSIGMQPKVDDTPIFKEALRYYSLVFDAVYTPKITRLLRE 483
Query: 475 AAEVGATVVSGVEMFIRQALGQFRLFTG 502
A E G +V+GVEMFI QA Q+ FTG
Sbjct: 484 AHESGVKIVTGVEMFIGQAYEQYERFTG 511
>gi|535771|gb|AAA34069.1| dehydroquinate dehydratase/shikimate dehydrogenase, partial
[Nicotiana tabacum]
Length = 579
Score = 451 bits (1161), Expect = e-124, Method: Compositional matrix adjust.
Identities = 246/508 (48%), Positives = 351/508 (69%), Gaps = 18/508 (3%)
Query: 2 EVAAKNSLLVCTQLECETTEEMQASIEQAKVEGADLVELCIDSME-FSHISEVDKLIQHP 60
E +N L+C + +T ++M +++AK+ GADLVE+ +DS++ F+ S++D +I+
Sbjct: 25 EAMTRNETLICAPIMADTVDQMLNLMQKAKISGADLVEVRLDSLKSFNPQSDIDTIIKQS 84
Query: 61 TLPAIVSYR--LKSSRKSSDEACKNTCLQVLRRALDLDVEFVEMDYEVASDPLMSEIIYS 118
LP + +YR + + + DE + L LR A++L ++++++ + A D + + +
Sbjct: 85 PLPTLFTYRPTWEGGQYAGDEVSR---LDALRVAMELGADYIDVELK-AIDEFNTALHGN 140
Query: 119 RS-NTKIIVSSYLNGGGKPTTEKLGDVIACMQATGADVMKLEIAVDSITDLAPVFEMLTH 177
+S K+IVSS+ N P++E+LG+++A +QA+GAD++K I D+A VF++ H
Sbjct: 141 KSAKCKVIVSSH-NYDNTPSSEELGNLVARIQASGADIVKFATTALDIMDVARVFQITVH 199
Query: 178 CQVPLIALAVGSRGLISQLLGPKFGGFLVYGSL--GGKSVPGLPTLVSLKQVYQLEHINP 235
QVP+IA+ +G +GL+S++L PKFGG+L +G+L G S PG PT+ L +Y + P
Sbjct: 200 SQVPIIAMVMGEKGLMSRILCPKFGGYLTFGTLEVGKVSAPGQPTIKDLLNIYNFRQLGP 259
Query: 236 DTKIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLVDDVKEFFRTYSGTDFAGFSVG 295
DT+IFG++ PV HSK P+L+N AFR FNG+Y+P+LVDDV FFRTYS DFAG +V
Sbjct: 260 DTRIFGIIGKPVSHSKSPLLYNEAFRSVGFNGVYMPLLVDDVANFFRTYSSLDFAGSAVT 319
Query: 296 IPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALRERQ-G 354
IPHKE V CCDE++P AK IGAVN ++ R +DGKL G NTD AISAIE+AL+ Q
Sbjct: 320 IPHKEAIVDCCDELNPTAKVIGAVNCVVSR-LDGKLFGCNTDYVGAISAIEEALQGSQPS 378
Query: 355 INGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGARVIIFNRNYERAKALADAVSGEA 414
++G SP+AGK+FV++GAGGAG+ALA+GAK +GARV+I NR YERA+ LAD V G+A
Sbjct: 379 MSG-----SPLAGKLFVVIGAGGAGKALAYGAKEKGARVVIANRTYERARELADVVGGQA 433
Query: 415 LHFEYLHEFFPEKGMILANASAIGMEPNSDQSPVPKEALKAYELVFDAVYTPRNTRLLRE 474
L + L F PE MILAN ++IGM+P D +P+ KEAL+ Y LVFDAVYTP+ TRLLRE
Sbjct: 434 LSLDELSNFHPENDMILANTTSIGMQPKVDDTPIFKEALRYYSLVFDAVYTPKITRLLRE 493
Query: 475 AAEVGATVVSGVEMFIRQALGQFRLFTG 502
A E G +V+GVEMFI QA Q+ FTG
Sbjct: 494 AHESGVKIVTGVEMFIGQAYEQYERFTG 521
>gi|242085728|ref|XP_002443289.1| hypothetical protein SORBIDRAFT_08g016970 [Sorghum bicolor]
gi|241943982|gb|EES17127.1| hypothetical protein SORBIDRAFT_08g016970 [Sorghum bicolor]
Length = 541
Score = 451 bits (1160), Expect = e-124, Method: Compositional matrix adjust.
Identities = 255/501 (50%), Positives = 340/501 (67%), Gaps = 15/501 (2%)
Query: 10 LVCTQLECETTEEMQASIEQAKVEGADLVELCIDSME-FSHISEVDKLIQHPT-LPAIVS 67
+VC EM + A GAD+ EL +D + F+ ++ ++ P LPA+V+
Sbjct: 23 MVCVPATARAPREMAEELAAAAALGADVAELRLDCLAGFAPRRDLPVILAKPRPLPALVT 82
Query: 68 YRLKSSRKSSDEACKNTCLQVLRRALDLDVEFVEMDYEVASDPLMSEIIYSR-SNTKIIV 126
YR K E + + L A++L E+V+++++VA D M I + N K+IV
Sbjct: 83 YRPKW-EGGEYEGDDESRFEALLLAMELGAEYVDVEFKVA-DKFMKLISGKKPDNCKLIV 140
Query: 127 SSYLNGGGKPTTEKLGDVIACMQATGADVMKLEIAVDSITDLAPVFEMLTHCQ---VPLI 183
SS+ N P++E+L +++A +QATGAD++K+ I D+A +F++L HCQ VP+I
Sbjct: 141 SSH-NYENTPSSEELANLVAQIQATGADIVKIATTATEIVDVAKMFQILVHCQEKQVPII 199
Query: 184 ALAVGSRGLISQLLGPKFGGFLVYGSL--GGKSVPGLPTLVSLKQVYQLEHINPDTKIFG 241
L + RG IS++L PK+GGFL +GSL G +S P PT L VY + I PDTK+FG
Sbjct: 200 GLVMNDRGFISRVLCPKYGGFLTFGSLKKGKESAPAQPTAADLINVYNIRQIGPDTKVFG 259
Query: 242 LVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLVDDVKEFFRTYSGTDFAGFSVGIPHKEP 301
++ PVGHSK PILHN AFR N +YVP LVDD+ +F TYS DFAGFS IPHKE
Sbjct: 260 IIGKPVGHSKSPILHNEAFRSVGSNAVYVPFLVDDLAKFLNTYSSPDFAGFSCTIPHKEA 319
Query: 302 AVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALRERQGINGVASH 361
AV CCDEV P+A+ IGAVNTI+RRP DGKLVGYNTD AISAIED +R + + S
Sbjct: 320 AVRCCDEVDPIARDIGAVNTIVRRP-DGKLVGYNTDYVGAISAIEDGIRASEQTD---SD 375
Query: 362 TSPIAGKIFVLVGAGGAGRALAFGAKSRGARVIIFNRNYERAKALADAVSGEALHFEYLH 421
TSP+AG++FV++GAGGAG+ALA+GAK +GARV+I NR + RA+ L + + G AL L
Sbjct: 376 TSPLAGRLFVVIGAGGAGKALAYGAKEKGARVVIANRTFARAQELGNLIGGPALTLADLE 435
Query: 422 EFFPEKGMILANASAIGMEPNSDQSPVPKEALKAYELVFDAVYTPRNTRLLREAAEVGAT 481
+ PE+GMILAN +AIGM PN +++P+ K+ALK+Y +VFDAVYTP+ TRLLREAAE GAT
Sbjct: 436 NYHPEEGMILANTTAIGMHPNVNETPLSKQALKSYAVVFDAVYTPKETRLLREAAECGAT 495
Query: 482 VVSGVEMFIRQALGQFRLFTG 502
VVSG+EMFIRQA+GQF FTG
Sbjct: 496 VVSGLEMFIRQAMGQFEHFTG 516
>gi|218186992|gb|EEC69419.1| hypothetical protein OsI_38581 [Oryza sativa Indica Group]
Length = 531
Score = 451 bits (1159), Expect = e-124, Method: Compositional matrix adjust.
Identities = 260/517 (50%), Positives = 348/517 (67%), Gaps = 15/517 (2%)
Query: 10 LVCTQLECETTEEMQASIEQAKVEGADLVELCIDSME-FSHISEVDKLIQHP-TLPAIVS 67
L+C EM A + A GAD+ EL +D + F+ ++ L+ P LPA+V+
Sbjct: 21 LLCVPATARAPREMAAELAAAAALGADVAELRLDRLAGFAPRRDLPVLLAQPRPLPALVT 80
Query: 68 YRLKSSRKSSDEACKNTCLQVLRRALDLDVEFVEMDYEVASDPLMSEIIYSRSNT-KIIV 126
YR K E + L A+++ E+V+++ +VA D M I + T K+IV
Sbjct: 81 YRPKW-EGGEYEGDDEPRFEALLLAMEMGAEYVDIELKVA-DKFMKLISGKKPETCKLIV 138
Query: 127 SSYLNGGGKPTTEKLGDVIACMQATGADVMKLEIAVDSITDLAPVFEMLTHCQ---VPLI 183
SS+ N P+TE+L +++A +QATGAD++K+ I D+A +F++L HCQ VP+I
Sbjct: 139 SSH-NFENTPSTEELENLVAQIQATGADIVKIATTATEIVDVAKMFQILVHCQEKQVPII 197
Query: 184 ALAVGSRGLISQLLGPKFGGFLVYGSL--GGKSVPGLPTLVSLKQVYQLEHINPDTKIFG 241
L + RG IS++L PKFGG+L +GSL G +S P PT+ L VY ++ I PDTK++G
Sbjct: 198 GLVMNDRGFISRVLCPKFGGYLTFGSLEKGKESAPAQPTVTDLINVYNIKQIGPDTKVYG 257
Query: 242 LVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLVDDVKEFFRTYSGTDFAGFSVGIPHKEP 301
++ PVGHSK PILHN AFR N +YVP LVDD+ F TYS +FAGFS IPHKE
Sbjct: 258 IIGKPVGHSKSPILHNEAFRSVGLNAVYVPFLVDDLANFLNTYSSPEFAGFSCTIPHKEA 317
Query: 302 AVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALRERQGINGVASH 361
AV CCDEV P+AK IGAVNTIIR+P +GKLVGYNTD AISAIED +R Q + +
Sbjct: 318 AVRCCDEVDPIAKDIGAVNTIIRKP-NGKLVGYNTDYVGAISAIEDGIRASQPTD---TT 373
Query: 362 TSPIAGKIFVLVGAGGAGRALAFGAKSRGARVIIFNRNYERAKALADAVSGEALHFEYLH 421
TSP+AG++FV++GAGGAG+ALA+GAK +GARV+I NR + RA+ L + + AL L
Sbjct: 374 TSPLAGRLFVVIGAGGAGKALAYGAKEKGARVVIANRTFARAQELGNLLGAPALTLAELE 433
Query: 422 EFFPEKGMILANASAIGMEPNSDQSPVPKEALKAYELVFDAVYTPRNTRLLREAAEVGAT 481
+ PE+GMILAN +AIGM PN +++P+ K+ALK+Y +VFDAVYTP+ TRLLREAAE GAT
Sbjct: 434 NYHPEEGMILANTTAIGMHPNVNETPLSKQALKSYAVVFDAVYTPKETRLLREAAECGAT 493
Query: 482 VVSGVEMFIRQALGQFRLFTGGLAPEDFMRKLVLEQF 518
VVSG+EMFIRQA+GQF FTG AP+ MR +VL +
Sbjct: 494 VVSGLEMFIRQAMGQFEHFTGMPAPDSLMRDIVLTKI 530
>gi|326502876|dbj|BAJ99066.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 532
Score = 448 bits (1153), Expect = e-123, Method: Compositional matrix adjust.
Identities = 247/477 (51%), Positives = 327/477 (68%), Gaps = 12/477 (2%)
Query: 47 FSHISEVDKLIQHP-TLPAIVSYRLKSSRKSSDEACKNTCLQVLRRALDLDVEFVEMDYE 105
F+ ++ L+ P TLP +V+YR K E + L+ A++L E+V+++ +
Sbjct: 61 FAPRRDLPALLAKPRTLPTLVTYRPKWE-GGEYEGDDEPRFEALQLAMELGAEYVDIELK 119
Query: 106 VASDPLMSEIIYSRSNTKIIVSSYLNGGGKPTTEKLGDVIACMQATGADVMKLEIAVDSI 165
VA + N K+IVSS+ N P+ E+L ++A +QATGAD++K+ I
Sbjct: 120 VADKFIKFMSGKKPENCKLIVSSH-NYDNTPSAEELASLLAQIQATGADIVKIATTATEI 178
Query: 166 TDLAPVFEMLTHCQ---VPLIALAVGSRGLISQLLGPKFGGFLVYGSL--GGKSVPGLPT 220
D++ +F++L HCQ VP+I L + RG IS++L PKFGG+L +GSL G +S PT
Sbjct: 179 VDVSRMFQILVHCQEKQVPIIGLVMNDRGFISRVLCPKFGGYLTFGSLEKGKESAAAQPT 238
Query: 221 LVSLKQVYQLEHINPDTKIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLVDDVKEF 280
L VY + I PDTK+FG++ NPVGHSK PILHN AFR + +YVP LVDD+ +F
Sbjct: 239 AADLINVYNIRQIGPDTKVFGIIGNPVGHSKSPILHNEAFRSVGLHAVYVPFLVDDLAKF 298
Query: 281 FRTYSGTDFAGFSVGIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCES 340
TYS DFAGFS IPHKE AV CCDEV P+A+ IGAVNTIIR+P DGKLVGYNTD
Sbjct: 299 LSTYSSPDFAGFSCTIPHKEAAVRCCDEVDPIARDIGAVNTIIRKP-DGKLVGYNTDYVG 357
Query: 341 AISAIEDALRERQGINGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGARVIIFNRNY 400
AISAIED +R Q + S TSP+AG++FV++GAGGAG+ALA+GAK +GARV+I NR +
Sbjct: 358 AISAIEDGIRATQPTH---STTSPLAGRLFVVIGAGGAGKALAYGAKEKGARVVIANRTF 414
Query: 401 ERAKALADAVSGEALHFEYLHEFFPEKGMILANASAIGMEPNSDQSPVPKEALKAYELVF 460
RA+ L + + G AL L + PE+GMILAN +AIGM PN +++P+ K+ALK+Y +VF
Sbjct: 415 ARAQELGNLIGGPALTLAELENYHPEEGMILANTTAIGMHPNVNETPLSKQALKSYAVVF 474
Query: 461 DAVYTPRNTRLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRKLVLEQ 517
DAVYTP+ TRLLREAAE GATVVSG+EMFIRQA+GQF FTG AP+ MR +VL +
Sbjct: 475 DAVYTPKETRLLREAAECGATVVSGLEMFIRQAMGQFEHFTGMPAPDSLMRDIVLRK 531
>gi|222617206|gb|EEE53338.1| hypothetical protein OsJ_36349 [Oryza sativa Japonica Group]
Length = 531
Score = 447 bits (1151), Expect = e-123, Method: Compositional matrix adjust.
Identities = 259/517 (50%), Positives = 346/517 (66%), Gaps = 15/517 (2%)
Query: 10 LVCTQLECETTEEMQASIEQAKVEGADLVELCIDSME-FSHISEVDKLIQHP-TLPAIVS 67
L+C EM A A GAD+ EL +D + F+ ++ L+ P LPA+V+
Sbjct: 21 LLCVPATARAPREMAAEFAAAAALGADVAELRLDRLAGFAPRRDLPVLLAQPRPLPALVT 80
Query: 68 YRLKSSRKSSDEACKNTCLQVLRRALDLDVEFVEMDYEVASDPLMSEIIYSRSNT-KIIV 126
YR K E + L A+++ E+V+++ +VA D M I + T K+IV
Sbjct: 81 YRPKW-EGGEYEGDDEPRFEALLLAMEMGAEYVDIELKVA-DKFMKLISGKKPETCKLIV 138
Query: 127 SSYLNGGGKPTTEKLGDVIACMQATGADVMKLEIAVDSITDLAPVFEMLTHCQ---VPLI 183
SS+ N P+TE+L +++A +QATGAD++K+ I D+A +F++L HCQ VP+I
Sbjct: 139 SSH-NFENTPSTEELENLVAQIQATGADIVKIATTATEIVDVAKMFQILVHCQEKQVPII 197
Query: 184 ALAVGSRGLISQLLGPKFGGFLVYGSL--GGKSVPGLPTLVSLKQVYQLEHINPDTKIFG 241
L + RG IS++L PKFGG+L +GSL G +S P PT+ L VY ++ I PDTK++G
Sbjct: 198 GLVMNDRGFISRVLCPKFGGYLTFGSLEKGKESAPAQPTVTDLINVYNIKQIGPDTKVYG 257
Query: 242 LVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLVDDVKEFFRTYSGTDFAGFSVGIPHKEP 301
++ PVGHSK PILHN AFR N +YVP LVDD+ F TYS +FAGFS IPHKE
Sbjct: 258 IIGKPVGHSKSPILHNEAFRSVGLNAVYVPFLVDDLANFLNTYSSPEFAGFSCTIPHKEA 317
Query: 302 AVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALRERQGINGVASH 361
AV CCDEV P+AK IGAVNTIIR+P +GKLVGYNTD AISAIED +R Q + +
Sbjct: 318 AVRCCDEVDPIAKDIGAVNTIIRKP-NGKLVGYNTDYVGAISAIEDGIRASQPTD---TT 373
Query: 362 TSPIAGKIFVLVGAGGAGRALAFGAKSRGARVIIFNRNYERAKALADAVSGEALHFEYLH 421
TSP+AG++FV++GAGGAG+ALA+GAK +GARV+I NR + RA+ L + + AL L
Sbjct: 374 TSPLAGRLFVVIGAGGAGKALAYGAKEKGARVVIANRTFARAQELGNLLGAPALTLAELE 433
Query: 422 EFFPEKGMILANASAIGMEPNSDQSPVPKEALKAYELVFDAVYTPRNTRLLREAAEVGAT 481
+ PE+ MILAN +AIGM PN +++P+ K+ALK+Y +VFDAVYTP+ TRLLREAAE GAT
Sbjct: 434 NYHPEEEMILANTTAIGMHPNVNETPLSKQALKSYAVVFDAVYTPKETRLLREAAECGAT 493
Query: 482 VVSGVEMFIRQALGQFRLFTGGLAPEDFMRKLVLEQF 518
VVSG+EMFIRQA+GQF FTG AP+ MR +VL +
Sbjct: 494 VVSGLEMFIRQAMGQFEHFTGMPAPDSLMRDIVLTKI 530
>gi|281193024|gb|ADA57640.1| dehydroquinate dehydratase [Solanum tuberosum]
Length = 526
Score = 447 bits (1149), Expect = e-123, Method: Compositional matrix adjust.
Identities = 249/520 (47%), Positives = 352/520 (67%), Gaps = 18/520 (3%)
Query: 2 EVAAKNSLLVCTQLECETTEEMQASIEQAKVEGADLVELCIDSME-FSHISEVDKLIQHP 60
E KN L+C + ++ ++M +++AK GADLV + +DS++ F+ ++D LI+
Sbjct: 15 EAMRKNQTLICAPIMADSVDQMLILMQKAKTSGADLVGVRVDSLKSFNPRPDIDALIKQC 74
Query: 61 TLPAIVSYR--LKSSRKSSDEACKNTCLQVLRRALDLDVEFVEMDYEVASDPLMSEIIYS 118
LP + +YR + + + DE + L LR A++L ++++++ + A D + + +
Sbjct: 75 PLPTLFTYRPTWEGGQYAGDEMSR---LDALRLAMELGADYIDVELK-AIDEFNNALHGN 130
Query: 119 RS-NTKIIVSSYLNGGGKPTTEKLGDVIACMQATGADVMKLEIAVDSITDLAPVFEMLTH 177
+S K+IVSS+ N P+ E LG+++A +QA+GAD++K ITD+A VF++ H
Sbjct: 131 KSAKCKLIVSSH-NYESTPSAEDLGNLVARIQASGADIVKFATTAQDITDVARVFQITVH 189
Query: 178 CQVPLIALAVGSRGLISQLLGPKFGGFLVYGSL--GGKSVPGLPTLVSLKQVYQLEHINP 235
QVP+IA+ +G +GL+S++L PKFGG+L +G+L G S PG PT+ L +Y + P
Sbjct: 190 SQVPIIAMVMGEKGLMSRILCPKFGGYLTFGTLEMGKVSAPGQPTVEDLLNLYNFRQLGP 249
Query: 236 DTKIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLVDDVKEFFRTYSGTDFAGFSVG 295
DTKIFG++ PV HSK P+L+N +FR FNG+++ +LVDD+ FFRTYS DFAGFS
Sbjct: 250 DTKIFGIIGKPVSHSKPPLLYNESFRSVGFNGVFMHLLVDDIANFFRTYSSLDFAGFSCT 309
Query: 296 IPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALRERQ-G 354
IPHKE A+ CC E+ P AK+IGAVN IIRRP DGKL G NTD AISAIE+ L+ Q
Sbjct: 310 IPHKEAALDCCAEIDPTAKAIGAVNCIIRRP-DGKLFGCNTDYIGAISAIEEGLQGSQPS 368
Query: 355 INGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGARVIIFNRNYERAKALADAVSGEA 414
I+G SP+AGK+FV++GAGGAG+A+A+GAK +GARV+I NR YERA+ LA V EA
Sbjct: 369 ISG-----SPLAGKLFVVIGAGGAGKAIAYGAKEKGARVVIANRTYERARELAIVVGAEA 423
Query: 415 LHFEYLHEFFPEKGMILANASAIGMEPNSDQSPVPKEALKAYELVFDAVYTPRNTRLLRE 474
L + L F PE MILAN ++IGM+P D +P+ KEALK Y LVFDAVYTP+ TRLLRE
Sbjct: 424 LSLDELSNFHPENDMILANTTSIGMQPKVDDTPISKEALKHYPLVFDAVYTPKITRLLRE 483
Query: 475 AAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRKLV 514
A E GA +V+GVEMFI QA Q+ FTG AP++ + ++
Sbjct: 484 AQESGAKIVTGVEMFIGQAYEQYERFTGLPAPKELFKNIM 523
>gi|195641452|gb|ACG40194.1| shikimate dehydrogenase [Zea mays]
Length = 540
Score = 446 bits (1148), Expect = e-122, Method: Compositional matrix adjust.
Identities = 254/499 (50%), Positives = 342/499 (68%), Gaps = 12/499 (2%)
Query: 10 LVCTQLECETTEEMQASIEQAKVEGADLVELCIDSME-FSHISEVDKLIQHP-TLPAIVS 67
+VC EM A + A GAD+ EL +D + F+ ++ ++ P LPA+V+
Sbjct: 23 MVCVPATARAPREMAAELAAAAALGADVAELRLDCLAGFTPRRDLPVILAKPRPLPALVT 82
Query: 68 YRLKSSRKSSDEACKNTCLQVLRRALDLDVEFVEMDYEVASDPLMSEIIYSR--SNTKII 125
YR K E ++ + L A++L E+V+++ +VA D M ++I R N K+I
Sbjct: 83 YRPKWE-GGEYEGDDDSRFEALLLAMELGAEYVDVELKVA-DKFM-KLISGRKPDNCKLI 139
Query: 126 VSSYLNGGGKPTTEKLGDVIACMQATGADVMKLEIAVDSITDLAPVFEMLTHCQVPLIAL 185
VSS+ N P++E+L +++A +QATGAD++K+ I D+A +F++L HCQVP+I L
Sbjct: 140 VSSH-NYETTPSSEELANLVAQIQATGADIVKIATTATEIVDVAKMFQILVHCQVPIIGL 198
Query: 186 AVGSRGLISQLLGPKFGGFLVYGSL--GGKSVPGLPTLVSLKQVYQLEHINPDTKIFGLV 243
+ RG IS++L PK+GGFL +GSL G +S P PT L +Y + I PDTK+FG++
Sbjct: 199 LMNDRGFISRVLCPKYGGFLTFGSLKKGKESAPAQPTAADLINLYNIRQIGPDTKVFGII 258
Query: 244 SNPVGHSKGPILHNPAFRHTRFNGIYVPMLVDDVKEFFRTYSGTDFAGFSVGIPHKEPAV 303
PVGHSK PILHN AFR FN +YVP LVDD+ +F TYS DFAGFS IPHKE AV
Sbjct: 259 GKPVGHSKSPILHNEAFRSVGFNAVYVPFLVDDLAKFLDTYSSPDFAGFSCTIPHKEAAV 318
Query: 304 ACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALRERQGINGVASHTS 363
CCDEV P+A+ IGAVNTI+RRP DGKLVGYNTD AISAIED ++ + S
Sbjct: 319 RCCDEVDPIARDIGAVNTIVRRP-DGKLVGYNTDYVGAISAIEDGIKASES-EPTDPDKS 376
Query: 364 PIAGKIFVLVGAGGAGRALAFGAKSRGARVIIFNRNYERAKALADAVSGEALHFEYLHEF 423
P+AG++FV++GAGGAG+ALA+GAK +GARV+I NR + RA+ LA+ + G AL L +
Sbjct: 377 PLAGRLFVVIGAGGAGKALAYGAKEKGARVVIANRTFARAQELANLIGGPALTLADLENY 436
Query: 424 FPEKGMILANASAIGMEPNSDQSPVPKEALKAYELVFDAVYTPRNTRLLREAAEVGATVV 483
PE+GMILAN +AIGM PN +++P+ K+AL++Y +VFDAVYTP+ TRLLREAAE GATVV
Sbjct: 437 HPEEGMILANTTAIGMHPNVNETPLSKQALRSYAVVFDAVYTPKETRLLREAAECGATVV 496
Query: 484 SGVEMFIRQALGQFRLFTG 502
SG+EMFIRQA+GQF FTG
Sbjct: 497 SGLEMFIRQAMGQFEHFTG 515
>gi|259479224|dbj|BAI40147.1| dehydroquinate dehydratase/shikimate:NADP oxidoreductase [Diospyros
kaki]
Length = 508
Score = 443 bits (1140), Expect = e-122, Method: Compositional matrix adjust.
Identities = 238/508 (46%), Positives = 339/508 (66%), Gaps = 11/508 (2%)
Query: 10 LVCTQLECETTEEMQASIEQAKVEGADLVELCIDSME-FSHISEVDKLIQHPTLPAIVSY 68
++C + ET E+M + +AK GADLVE+ ID ++ FS ++ LI+ LP I++Y
Sbjct: 1 MICAPVMAETAEQMLGQMRKAKELGADLVEIRIDYLKSFSPQQHLEVLIKQSPLPTIITY 60
Query: 69 R--LKSSRKSSDEACKNTCLQVLRRALDLDVEFVEMDYEVASDPLMSEIIYSRSNTKIIV 126
R + + DE+ + L +A++L ++++++ +VA + S S K+IV
Sbjct: 61 RPTWEGGQYDGDESRRQATLH---QAMELGADYIDIELKVADEFFSSIQERSPKRPKVIV 117
Query: 127 SSYLNGGGKPTTEKLGDVIACMQATGADVMKLEIAVDSITDLAPVFEMLTHCQVPLIALA 186
SS+ N P+ E++G++ A +QATGAD++K+ ITD A + +++ H QVP I LA
Sbjct: 118 SSH-NYENTPSAEEIGNIAARIQATGADIVKIATTALDITDSARILQLIAHSQVPTIGLA 176
Query: 187 VGSRGLISQLLGPKFGGFLVYGSL--GGKSVPGLPTLVSLKQVYQLEHINPDTKIFGLVS 244
+G RGLIS++L KFGGFL +G+L G S PG PTL L +Y I PDTK+ G++
Sbjct: 177 MGERGLISRILCAKFGGFLTFGALESGIHSAPGQPTLRDLLDLYNFRQIEPDTKVHGVIG 236
Query: 245 NPVGHSKGPILHNPAFRHTRFNGIYVPMLVDDVKEFFRTYSGTDFAGFSVGIPHKEPAVA 304
NP+GHSK P L+N AF+ FNGIY+P+LVD+V F TYS DF G+S IPHK +
Sbjct: 237 NPIGHSKSPHLYNTAFKKAAFNGIYLPLLVDNVANFLNTYSSPDFTGYSYTIPHKMAGLE 296
Query: 305 CCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALRERQGINGVASHTSP 364
CCDEV P+AK+IGA++ +I++P DGKL+GYN D AI+AIE+ L + SP
Sbjct: 297 CCDEVDPIAKAIGAISCMIKKPSDGKLIGYNVDYLGAIAAIEEGLGGSS--SASNGSVSP 354
Query: 365 IAGKIFVLVGAGGAGRALAFGAKSRGARVIIFNRNYERAKALADAVSGEALHFEYLHEFF 424
+AG++FV++GAGGA +ALA+G K +GARV++ NR YE+AK LA + GE++ L++F
Sbjct: 355 LAGRLFVVIGAGGAAKALAYGGKEKGARVVVANRTYEKAKDLARKIGGESMPLTELNDFH 414
Query: 425 PEKGMILANASAIGMEPNSDQSPVPKEALKAYELVFDAVYTPRNTRLLREAAEVGATVVS 484
PE GMILANA+++GM+PN+D +P+ KEAL Y LVFDA+YTP+ TRLLREA E GA VV
Sbjct: 415 PEDGMILANATSVGMKPNTDATPISKEALSRYSLVFDAIYTPKWTRLLREAKETGAKVVF 474
Query: 485 GVEMFIRQALGQFRLFTGGLAPEDFMRK 512
G EMF+ QA QF FTG AP+D +R+
Sbjct: 475 GTEMFLNQAFVQFEKFTGLPAPKDLIRE 502
>gi|297833382|ref|XP_002884573.1| EMB3004/MEE32 [Arabidopsis lyrata subsp. lyrata]
gi|297330413|gb|EFH60832.1| EMB3004/MEE32 [Arabidopsis lyrata subsp. lyrata]
Length = 603
Score = 443 bits (1140), Expect = e-121, Method: Compositional matrix adjust.
Identities = 245/512 (47%), Positives = 340/512 (66%), Gaps = 5/512 (0%)
Query: 6 KNSLLVCTQLECETTEEMQASIEQAKVEGADLVELCIDSM-EFSHISEVDKLIQHPTLPA 64
KN L+C + ++ ++M +A GADLVE+ +D + +F+ I ++ +I+ LP
Sbjct: 91 KNPSLICAPVMADSIDKMVIETFKAHELGADLVEIRLDWLKDFNPIEDLKTIIKKSPLPT 150
Query: 65 IVSYRLKSSRKSSDEACKNTCLQVLRRALDLDVEFVEMDYEVASDPLMSEIIYSRSNTKI 124
+ +YR K E +N VLR A++L ++V+++ +VASD + S + ++
Sbjct: 151 LFTYRPKW-EGGQYEGDENERQDVLRLAMELGADYVDVELQVASDFIKSIDGKKPESFRV 209
Query: 125 IVSSYLNGGGKPTTEKLGDVIACMQATGADVMKLEIAVDSITDLAPVFEMLTHCQVPLIA 184
IVSS+ N P+ E L D++A +Q TGAD++K+ I D+A +F + + Q P I
Sbjct: 210 IVSSH-NYQNTPSVEDLNDLVARIQQTGADIVKIATTAVDIADVARMFHITSSAQGPTIG 268
Query: 185 LAVGSRGLISQLLGPKFGGFLVYGSLGGKSV--PGLPTLVSLKQVYQLEHINPDTKIFGL 242
L +G RGL+S++L KFGG+L +G+L V PG PT+ L +Y I PDTK++G+
Sbjct: 269 LVMGERGLMSRILCSKFGGYLTFGTLDSSKVSAPGQPTIKDLLDLYNFRRIGPDTKVYGI 328
Query: 243 VSNPVGHSKGPILHNPAFRHTRFNGIYVPMLVDDVKEFFRTYSGTDFAGFSVGIPHKEPA 302
+ PV HSK PI+HN AF+ F G+YV +LVD++ F + YS +DFAGFS IPHKE A
Sbjct: 329 IGKPVSHSKSPIVHNQAFKSVDFKGVYVHLLVDNLASFLQAYSSSDFAGFSCTIPHKEAA 388
Query: 303 VACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALRERQGINGVASHT 362
+ CCDEV PLAKSIGAVNTI+RR DGKL+GYNTDC +ISAIED LR + S +
Sbjct: 389 LQCCDEVDPLAKSIGAVNTILRRKSDGKLLGYNTDCIGSISAIEDGLRRSGDPSSGPSSS 448
Query: 363 SPIAGKIFVLVGAGGAGRALAFGAKSRGARVIIFNRNYERAKALADAVSGEALHFEYLHE 422
SP+AGK V++GAGGAG+ALA+GAK +GA+V+I NR YERA LA+A+ G AL L
Sbjct: 449 SPLAGKTVVVIGAGGAGKALAYGAKEKGAKVVIANRTYERALELAEAIGGRALSLTDLDN 508
Query: 423 FFPEKGMILANASAIGMEPNSDQSPVPKEALKAYELVFDAVYTPRNTRLLREAAEVGATV 482
F PE GM+LAN +++GM+PN D++P+ K ALK Y LVFDAVYTPR TRLLREA E GA
Sbjct: 509 FHPEDGMVLANTTSMGMQPNVDETPISKHALKHYALVFDAVYTPRITRLLREAEESGAIT 568
Query: 483 VSGVEMFIRQALGQFRLFTGGLAPEDFMRKLV 514
VSG EMF+RQA QF +FTG AP++ +++
Sbjct: 569 VSGSEMFVRQAYEQFEIFTGLPAPKELYWQIM 600
>gi|76782194|gb|ABA54867.1| putative 3-dehydroquinate dehydratase/shikimate dehydrogenase
[Fagus sylvatica]
Length = 536
Score = 442 bits (1138), Expect = e-121, Method: Compositional matrix adjust.
Identities = 250/522 (47%), Positives = 347/522 (66%), Gaps = 25/522 (4%)
Query: 6 KNSLLVCTQLECETTEEMQASIEQAKVEGADLVELCIDSME-FSHISEVDKLIQHPTLPA 64
KN LVC + E+ ++M ++++AK GADLVE+ +DS++ F+ ++ LI+ LP
Sbjct: 24 KNPTLVCAPIMAESVDKMVINMDKAKQGGADLVEIRLDSLKSFNPNGDLKTLIKECPLPT 83
Query: 65 IVSYRLKSSRKSSDEACKNTCLQVLRRALDLDVEFVEMDYEVASDPLMSEIIYSRSNT-- 122
+ +YR K D K L LR A++ ++++++ +VA + +E IY +
Sbjct: 84 LFTYRPKWEGGQYDGDEKKR-LDALRLAMEFGADYIDVELQVAQE--FNESIYGKKPEMF 140
Query: 123 KIIVSSYLNGGGKPTTEKLGDVIACMQATGADVMKLEIAVDSITDLAPVFEMLTHCQV-- 180
K+IVSS+ N P+ E LG+++A +QATGAD++K ITD+A +F+++ H QV
Sbjct: 141 KVIVSSH-NYQNTPSVEDLGNLVARIQATGADIVKFATTALEITDVARIFQIIVHSQVSS 199
Query: 181 -PLIALAVGSRGLISQLLGPKFGGFLVYGSL--GGKSVPGLPTLVSLKQVYQLEHINPDT 237
P+IA+ +G RG IS++L PKFGGFL +G++ G S PG P + L +Y I PDT
Sbjct: 200 VPIIAIVMGERGFISRILCPKFGGFLSFGTIESGIVSAPGQPIMKDLLHLYNFRQIGPDT 259
Query: 238 KIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLVDDVKEFFRTYSGTD-----FAGF 292
K+FG++ PVGHSK PIL+N AF+ FNG+YV + + D FAGF
Sbjct: 260 KVFGIIGKPVGHSKSPILYNEAFKSVGFNGVYV------LSWWMTCKISPDLLILRFAGF 313
Query: 293 SVGIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALRER 352
S+ IPHKE A+ CCDEV P+AKSIGAVN I+RR DGK+ GYNTD AISAIED LR
Sbjct: 314 SITIPHKEAALKCCDEVDPVAKSIGAVNCIVRRSTDGKIFGYNTDYVGAISAIEDGLRGS 373
Query: 353 QGINGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGARVIIFNRNYERAKALADAVSG 412
+ I+ A SP+AGK+FV++GAGGAG+ALA+GAK +GARV+I NR YERAK +AD V G
Sbjct: 374 KNISYAAD--SPLAGKLFVVIGAGGAGKALAYGAKEKGARVVIANRTYERAKEIADTVGG 431
Query: 413 EALHFEYLHEFFPEKGMILANASAIGMEPNSDQSPVPKEALKAYELVFDAVYTPRNTRLL 472
+AL L F PE GMILAN ++IGM+P D++P+PK AL++Y +VFDAVYTP+ TRLL
Sbjct: 432 QALSLADLENFHPEDGMILANTTSIGMQPKVDETPIPKHALRSYSVVFDAVYTPKITRLL 491
Query: 473 REAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRKLV 514
RE+ E GA +V+GVEMFI QA QF FTG AP++ +K++
Sbjct: 492 RESEESGAIIVTGVEMFIGQAFEQFERFTGLPAPKELFKKIM 533
>gi|397911046|gb|AFO68799.1| shikimate dehydrogenase, partial [Pachysandra terminalis]
Length = 490
Score = 441 bits (1135), Expect = e-121, Method: Compositional matrix adjust.
Identities = 247/505 (48%), Positives = 339/505 (67%), Gaps = 18/505 (3%)
Query: 10 LVCTQLECETTEEMQASIEQAKVEGADLVELCIDSME-FSHISEVDKLIQHPTLPAIVSY 68
L+C + E+ ++M + +AK GADLVE+ +D ++ FS ++D LI+ LP +++Y
Sbjct: 1 LICAPVMGESVDDMLMEMRKAKEYGADLVEVRLDYIKNFSPRKDLDTLIRECPLPTLITY 60
Query: 69 RLKSSRKSSDEACKNTCLQVLRRALDLDVEFVEMDYEVASDPLMSEIIYSRSNTKIIVSS 128
R K E +N L LR A++L V++++++ +VA + + S KIIVSS
Sbjct: 61 RPKWE-GGLYEGDENKRLDALRVAMELGVDYIDIELQVAHEFIHSVHAKKPEKFKIIVSS 119
Query: 129 YLNGGGKPTTEKLGDVIACMQATGADVMKLEIAVDSITDLAPVFEMLTHCQVPLIALAVG 188
+ N P+ E +GD++A +QATGAD++K+ ITD+A +F+++ H QVP+I L +G
Sbjct: 120 H-NYQSTPSVEDIGDLVARIQATGADIVKIATTALEITDVARMFQIIVHSQVPIIGLVMG 178
Query: 189 SRGLISQLLGPKFGGFLVYGSL--GGKSVPGLPTLVSLKQVYQLEHINPDTKIFGLVSNP 246
RGL+S+LL PKFGG+L +G++ G S PG PT+ L Y I PDTK+FG++ P
Sbjct: 179 ERGLMSRLLCPKFGGYLTFGAIEAGKLSAPGQPTIKDLLDKYNFRQIGPDTKVFGVIGKP 238
Query: 247 VGHSKGPILHNPAFRHTRFNGIYVPMLVDDVKEFFRTYSGTDFAGFSVGIPHKEPAVACC 306
V SK P+L+N AF+ +NG+YV LVDD+ +F +TY DFAGFS +PHKE A+
Sbjct: 239 VSQSKSPLLYNNAFKSIGYNGVYVQFLVDDIAKFLKTYPSPDFAGFSCTMPHKEAALEYL 298
Query: 307 DEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALRERQGINGVASHTSPIA 366
DE+ P+AK IGAVN I+RR DGKL GYNTD AISAIED LR S +A
Sbjct: 299 DEIDPIAKLIGAVNCIVRRS-DGKLSGYNTDYFGAISAIEDGLR------------SLLA 345
Query: 367 GKIFVLVGAGGAGRALAFGAKSRGARVIIFNRNYERAKALADAVSGEALHFEYLHEFFPE 426
GK+FV++GAGGAG+ALAFGAK +GARV+I NR ++RA LAD V G+A+ L F PE
Sbjct: 346 GKLFVVIGAGGAGKALAFGAKEKGARVVIANRTFDRASKLADIVGGQAISLMELDNFHPE 405
Query: 427 KGMILANASAIGMEPNSDQSPVPKEALKAYELVFDAVYTPRNTRLLREAAEVGATVVSGV 486
GM+LAN ++IGM+P D++P+PK+AL Y LVFDAVYTP+ TRLLREA E GATVVSG+
Sbjct: 406 DGMVLANTTSIGMQPKVDETPIPKKALSNYSLVFDAVYTPKLTRLLREAEECGATVVSGL 465
Query: 487 EMFIRQALGQFRLFTGGLAPEDFMR 511
EMFIRQA Q+ FTG AP++ R
Sbjct: 466 EMFIRQAYEQYERFTGLPAPKELFR 490
>gi|350537731|ref|NP_001234051.1| dehydroquinate dehydratase/shikimate:NADP oxidoreductase [Solanum
lycopersicum]
gi|3169883|gb|AAC17991.1| dehydroquinate dehydratase/shikimate:NADP oxidoreductase [Solanum
lycopersicum]
gi|3169888|gb|AAC17993.1| dehydroquinate dehydratase/shikimate:NADP oxidoreductase [Solanum
lycopersicum]
Length = 545
Score = 441 bits (1133), Expect = e-121, Method: Compositional matrix adjust.
Identities = 246/538 (45%), Positives = 349/538 (64%), Gaps = 35/538 (6%)
Query: 2 EVAAKNSLLVCTQLECETTEEMQASIEQAKVEGADLVELCIDSME-FSHISEVDKLIQHP 60
E KN L+C + ++ ++M +++AK+ GADLVE+ +DS++ F+ ++D LI+
Sbjct: 15 EAMRKNQTLICAPIMADSVDQMLILMQKAKISGADLVEVRVDSLKSFNPRPDIDTLIKQC 74
Query: 61 TLPAIVSYR---------------------LKSSRKSSDEACKNTCLQVLRRALDLDVEF 99
LP + +Y + + + DE + L LR A++L ++
Sbjct: 75 PLPTLFTYSYVLGVGQGILLIRYYKGIGPTWEGGQYAGDEKSR---LDALRLAMELGADY 131
Query: 100 VEMDYEVASDPLMSEIIYSRSNTKIIVSSYLNGGGKPTTEKLGDVIACMQATGADVMKLE 159
++++ + + + + K+IVSS+ N P+ E LG+++A +QA+GAD++K
Sbjct: 132 IDVELKAIGEFNNALHGNKSAKCKLIVSSH-NYESTPSAEDLGNLVARIQASGADIVKFA 190
Query: 160 IAVDSITDLAPVFEMLTHCQVPLIALAVGSRGLISQLLGPKFGGFLVYGSL--GGKSVPG 217
ITD+A VF++ H QVP+IA+ +G +GL+S++L PKFGG+L +G+L G S PG
Sbjct: 191 TTAQDITDVARVFQITVHSQVPIIAMVMGEKGLMSRILCPKFGGYLTFGTLEVGKVSAPG 250
Query: 218 LPTLVSLKQVYQLEHINPDTKIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLVDDV 277
PT+ L +Y + PDTKIFG++ PV HSK P+L+N +FR FNG+++ +LVDD+
Sbjct: 251 QPTVEDLLNLYNFRQLGPDTKIFGIIGKPVSHSKSPLLYNESFRSVGFNGVFMHLLVDDI 310
Query: 278 KEFFRTYSGTDFAGFSVGIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTD 337
FFRTYS DFAGFS IPHKE A+ CC E+ P AK+IGAVN IIRRP DGKL G NTD
Sbjct: 311 ANFFRTYSSLDFAGFSCTIPHKEAALDCCAEIDPTAKAIGAVNCIIRRP-DGKLFGCNTD 369
Query: 338 CESAISAIEDALRERQ-GINGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGARVIIF 396
AISAIE+ L+ Q I+G SP+AGK+FV++GAGGAG+A+A+GAK +GARV+I
Sbjct: 370 YIGAISAIEEGLQGSQPSISG-----SPLAGKLFVVIGAGGAGKAIAYGAKEKGARVVIA 424
Query: 397 NRNYERAKALADAVSGEALHFEYLHEFFPEKGMILANASAIGMEPNSDQSPVPKEALKAY 456
NR YERA+ LA V EAL + L F PE MILAN ++IGM+P D +P+ KEALK Y
Sbjct: 425 NRTYERARELAIVVGAEALSLDELSNFHPENDMILANTTSIGMQPKVDDTPISKEALKHY 484
Query: 457 ELVFDAVYTPRNTRLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRKLV 514
LVFDAVYTP+ TRLLREA E GA +V+GVEMFI QA Q+ FTG AP++ + ++
Sbjct: 485 SLVFDAVYTPKITRLLREAQESGAKIVTGVEMFIGQAYEQYERFTGLPAPKELFKNIM 542
>gi|212274689|ref|NP_001130790.1| shikimate dehydrogenase1 [Zea mays]
gi|194690122|gb|ACF79145.1| unknown [Zea mays]
gi|413916608|gb|AFW56540.1| shikimate dehydrogenase [Zea mays]
Length = 543
Score = 440 bits (1132), Expect = e-121, Method: Compositional matrix adjust.
Identities = 254/502 (50%), Positives = 341/502 (67%), Gaps = 15/502 (2%)
Query: 10 LVCTQLECETTEEMQASIEQAKVEGADLVELCIDSME-FSHISEVDKLIQHP-TLPAIVS 67
+VC EM A + A GAD+ EL +D + F+ ++ ++ P LPA+V+
Sbjct: 23 MVCVPATARAPREMAAELAAAAALGADVAELRLDCLAGFAPRRDLPVILAKPRPLPALVT 82
Query: 68 YRLKSSRKSSDEACKNTCLQVLRRALDLDVEFVEMDYEVASDPLMSEIIYSRS--NTKII 125
YR K E + + L A++L E+V+++ +VA D M ++I R N K+I
Sbjct: 83 YRPKWE-GGEYEGDDESRFEALLLAMELGAEYVDVELKVA-DKFM-KLISGRKPDNCKLI 139
Query: 126 VSSYLNGGGKPTTEKLGDVIACMQATGADVMKLEIAVDSITDLAPVFEMLTHCQ---VPL 182
VSS+ N P++E+L +++A +QATGAD++K+ I D+A +F++L HCQ VP+
Sbjct: 140 VSSH-NYETTPSSEELANLVAQIQATGADIVKIATTATEIVDVAKMFQILVHCQEKQVPI 198
Query: 183 IALAVGSRGLISQLLGPKFGGFLVYGSL--GGKSVPGLPTLVSLKQVYQLEHINPDTKIF 240
I L + RG IS++L PK+GGFL +GSL G +S P PT L +Y + I PDTK+F
Sbjct: 199 IGLVMNDRGFISRVLCPKYGGFLTFGSLKKGKESAPAQPTAADLINLYNIRQIGPDTKVF 258
Query: 241 GLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLVDDVKEFFRTYSGTDFAGFSVGIPHKE 300
G++ PVGHSK PILHN AFR FN +YVP LVDD+ +F TYS DFAGFS IPHKE
Sbjct: 259 GIIGKPVGHSKSPILHNEAFRSVGFNAVYVPFLVDDLAKFLDTYSSPDFAGFSCTIPHKE 318
Query: 301 PAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALRERQGINGVAS 360
AV CCDEV P+A+ IGAVNTI+RRP DGKLVGYNTD AISAIED ++ +
Sbjct: 319 AAVRCCDEVDPVARDIGAVNTIVRRP-DGKLVGYNTDYVGAISAIEDGIKASES-EPTDP 376
Query: 361 HTSPIAGKIFVLVGAGGAGRALAFGAKSRGARVIIFNRNYERAKALADAVSGEALHFEYL 420
SP+AG++FV++GAGGAG+ALA+GAK +GARV+I NR + RA+ LA+ + G AL L
Sbjct: 377 DKSPLAGRLFVVIGAGGAGKALAYGAKEKGARVVIANRTFARAQELANLIGGPALTLADL 436
Query: 421 HEFFPEKGMILANASAIGMEPNSDQSPVPKEALKAYELVFDAVYTPRNTRLLREAAEVGA 480
+ PE+GMILAN +AIGM PN +++P+ K+AL++Y +VFDAVYTP+ TRLLREAAE GA
Sbjct: 437 ENYHPEEGMILANTTAIGMHPNVNETPLSKQALRSYAVVFDAVYTPKETRLLREAAECGA 496
Query: 481 TVVSGVEMFIRQALGQFRLFTG 502
TVVSG+EMFIRQA+GQF FTG
Sbjct: 497 TVVSGLEMFIRQAMGQFEHFTG 518
>gi|194694678|gb|ACF81423.1| unknown [Zea mays]
Length = 428
Score = 439 bits (1130), Expect = e-120, Method: Compositional matrix adjust.
Identities = 236/432 (54%), Positives = 312/432 (72%), Gaps = 12/432 (2%)
Query: 93 LDLDVEFVEMDYEVASDPLMSEIIYSR--SNTKIIVSSYLNGGGKPTTEKLGDVIACMQA 150
++L E+V+++ +VA D M ++I R N K+IVSS+ N P++E+L +++A +QA
Sbjct: 1 MELGAEYVDVELKVA-DKFM-KLISGRKPDNCKLIVSSH-NYETTPSSEELANLVAQIQA 57
Query: 151 TGADVMKLEIAVDSITDLAPVFEMLTHCQ---VPLIALAVGSRGLISQLLGPKFGGFLVY 207
TGAD++K+ I D+A +F++L HCQ VP+I L + RG IS++L PK+GGFL +
Sbjct: 58 TGADIVKIATTATEIVDVAKMFQILVHCQEKQVPIIGLVMNDRGFISRVLCPKYGGFLTF 117
Query: 208 GSL--GGKSVPGLPTLVSLKQVYQLEHINPDTKIFGLVSNPVGHSKGPILHNPAFRHTRF 265
GSL G +S P PT L +Y + I PDTK+FG++ PVGHSK PILHN AFR F
Sbjct: 118 GSLKKGKESAPAQPTAADLINLYNIRQIGPDTKVFGIIGKPVGHSKSPILHNEAFRSVGF 177
Query: 266 NGIYVPMLVDDVKEFFRTYSGTDFAGFSVGIPHKEPAVACCDEVHPLAKSIGAVNTIIRR 325
N +YVP LVDD+ +F TYS DFAGFS IPHKE AV CCDEV P+A+ IGAVNTI+RR
Sbjct: 178 NAVYVPFLVDDLAKFLDTYSSPDFAGFSCTIPHKEAAVRCCDEVDPVARDIGAVNTIVRR 237
Query: 326 PIDGKLVGYNTDCESAISAIEDALRERQGINGVASHTSPIAGKIFVLVGAGGAGRALAFG 385
P DGKLVGYNTD AISAIED ++ + SP+AG++FV++GAGGAG+ALA+G
Sbjct: 238 P-DGKLVGYNTDYVGAISAIEDGIKASES-EPTDPDKSPLAGRLFVVIGAGGAGKALAYG 295
Query: 386 AKSRGARVIIFNRNYERAKALADAVSGEALHFEYLHEFFPEKGMILANASAIGMEPNSDQ 445
AK +GARV+I NR + RA+ LA+ + G AL L + PE+GMILAN +AIGM PN ++
Sbjct: 296 AKEKGARVVIANRTFARAQELANLIGGPALTLADLENYHPEEGMILANTTAIGMHPNVNE 355
Query: 446 SPVPKEALKAYELVFDAVYTPRNTRLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLA 505
+P+ K+AL++Y +VFDAVYTP+ TRLLREAAE GATVVSG+EMFIRQA+GQF FTG A
Sbjct: 356 TPLSKQALRSYAVVFDAVYTPKETRLLREAAECGATVVSGLEMFIRQAMGQFEHFTGMPA 415
Query: 506 PEDFMRKLVLEQ 517
P+ MR +VL +
Sbjct: 416 PDSLMRDIVLTK 427
>gi|449448440|ref|XP_004141974.1| PREDICTED: bifunctional 3-dehydroquinate dehydratase/shikimate
dehydrogenase, chloroplastic-like [Cucumis sativus]
Length = 529
Score = 439 bits (1130), Expect = e-120, Method: Compositional matrix adjust.
Identities = 239/521 (45%), Positives = 343/521 (65%), Gaps = 11/521 (2%)
Query: 2 EVAAKNSLLVCTQLECETTEEMQASIEQAKVEGADLVELCIDSME-FSHISEVDKLIQHP 60
E ++NS L+C + E+ ++M +++A GAD+VE+ +D+++ F+ ++ LI+
Sbjct: 15 EGISRNSTLICVPIMSESIDKMIVDVKKAGENGADIVEIRLDALKIFNPHEDLKLLIKES 74
Query: 61 TLPAIVSYR--LKSSRKSSDEACKNTCLQVLRRALDLDVEFVEMDYEVASDPLMSEIIYS 118
LP + +YR + + DE N L VLR A+ L ++++++ +VA + + S
Sbjct: 75 PLPTLFTYRPNWEGGQYDGDE---NQRLDVLRLAMKLGADYIDVELQVAREFIDSIQQEK 131
Query: 119 RSNTKIIVSSYLNGGGKPTTEKLGDVIACMQATGADVMKLEIAVDSITDLAPVFEMLTHC 178
+N K+IVS++ N P+ E LG ++A +QATGAD++K+ ITD+A +F++L +
Sbjct: 132 PNNFKVIVSNH-NYKKTPSLEDLGSLVAEIQATGADIVKIATTALDITDVARMFQVLVYS 190
Query: 179 QVPLIALAVGSRGLISQLLGPKFGGFLVYGSL--GGKSVPGLPTLVSLKQVYQLEHINPD 236
QVP+I L + RG I +LL PK+GG+L +G+L G S PG PT+ L +Y HI PD
Sbjct: 191 QVPIIGLVMKDRGFICRLLCPKYGGYLTFGTLEEGIVSAPGQPTIKDLLNLYNFRHIGPD 250
Query: 237 TKIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLVDDVKEFFRTYSGTDFAGFSVGI 296
TK+FG++ NPVG SK P L+N F+ + IYVP+LVDD +F TYS +D GFSV I
Sbjct: 251 TKVFGIIGNPVGDSKLPALYNELFKLVGLDAIYVPLLVDDPTKFLDTYSSSDIGGFSVTI 310
Query: 297 PHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALRERQGIN 356
PHKE CDEV +AK+ GAVN ++RR DGKL GYNTDC AISAIED L N
Sbjct: 311 PHKEAVFKYCDEVDSVAKATGAVNFVLRRQSDGKLCGYNTDCYGAISAIEDGLLGLH--N 368
Query: 357 GVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGARVIIFNRNYERAKALADAVSGEALH 416
+ +S +AGK+ V++GAGG G+A+A+GAK +GAR++I NR+++RA+ LAD V G+++
Sbjct: 369 DSFAVSSRLAGKLVVVIGAGGVGKAVAYGAKQKGARIVIANRSFDRARELADRVGGQSVS 428
Query: 417 FEYLHEFFPEKGMILANASAIGMEPNSDQSPVPKEALKAYELVFDAVYTPRNTRLLREAA 476
L F PE GMIL NA+ IGM+P D++P+PK ALK Y LVFDAVYTPR TRLLREA
Sbjct: 429 LADLENFHPEDGMILVNATPIGMQPKVDETPIPKHALKRYSLVFDAVYTPRMTRLLREAE 488
Query: 477 EVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRKLVLEQ 517
E GA +V G+EMF RQA Q+ FTG AP++ +RK + +
Sbjct: 489 ESGAAIVPGLEMFTRQAYEQYEGFTGLPAPKERIRKFLADN 529
>gi|357475825|ref|XP_003608198.1| Dehydroquinate dehydratase/ shikimate dehydrogenase [Medicago
truncatula]
gi|355509253|gb|AES90395.1| Dehydroquinate dehydratase/ shikimate dehydrogenase [Medicago
truncatula]
Length = 506
Score = 439 bits (1129), Expect = e-120, Method: Compositional matrix adjust.
Identities = 240/500 (48%), Positives = 339/500 (67%), Gaps = 23/500 (4%)
Query: 7 NSLLVCTQLECETTEEMQASIEQAKVEGADLVELCIDSME-FSHISEVDKLIQ-HPTLPA 64
N++L+C + ET ++M A I++AK+ GADLVE+ +DS++ F+ +++ +Q H +LP
Sbjct: 2 NAMLICVPIMGETIQKMIADIQKAKLNGADLVEIRLDSLKTFNPSQDLNTFMQQHHSLPF 61
Query: 65 IVSYRLKSSRKSSDEACKNTCLQVLRRALDLDVEFVEMDYEVASDPLMSEIIYSRSNTKI 124
+ +YR K D +N L L+ A++L+ ++++++ +VA S + + TK+
Sbjct: 62 LFTYRPKWEGGMYD-GDENQRLDALQLAMELEADYIDVELKVAHQFYDSIRGKTYNKTKV 120
Query: 125 IVSSYLNGGGKPTTEKLGDVIACMQATGADVMKLEIAVDSITDLAPVFEMLTHCQVPLIA 184
IVSS+ N P+ E LG+++A +QATGAD++K+ ITD+A +F+++ H QVP I
Sbjct: 121 IVSSH-NYQQTPSVEDLGNLVARIQATGADIVKIATTAVEITDVARMFQIMVHSQVPFIG 179
Query: 185 LAVGSRGLISQLLGPKFGGFLVYGSL--GGKSVPGLPTLVSLKQVYQLEHINPDTKIFGL 242
L +G RGLIS++L KFGG+L +G+L G S PG PTL L +Y I P+TK+FG+
Sbjct: 180 LVMGDRGLISRILCAKFGGYLTFGTLESGVVSAPGQPTLKDLLHLYNFRQIGPNTKVFGI 239
Query: 243 VSNPVGHSKGPILHNPAFRHTRFNGIYVPMLVDDVKEFFRTYSGTDFAGFSVGIPHKEPA 302
V P F+G++V +LVDD+ F RTYS TDF GFSV IPHKE A
Sbjct: 240 VGKPT---------------IGFDGVFVFLLVDDLANFLRTYSSTDFVGFSVTIPHKEAA 284
Query: 303 VACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALRERQGINGVASHT 362
+ CCDEV P+AKSIG VN ++RRP DGKL+GYNTD AISAIED LR + +G A
Sbjct: 285 LKCCDEVDPVAKSIGVVNCVVRRPTDGKLIGYNTDYVGAISAIEDGLRGKHNDSGTA--V 342
Query: 363 SPIAGKIFVLVGAGGAGRALAFGAKSRGARVIIFNRNYERAKALADAVSGEALHFEYLHE 422
SP+ GK+FV++GAGGAG+ALA+GAK +GAR++I NR Y+RA+ LAD + G+AL L
Sbjct: 343 SPLVGKLFVVIGAGGAGKALAYGAKEKGARIVIANRTYDRARELADVIGGDALTLNDLDN 402
Query: 423 FFPEKGMILANASAIGMEPNSDQSPVPKEALKAYELVFDAVYTPRNTRLLREAAEVGATV 482
+ PE GMILAN ++IGM+P D++P+ K ALK Y LVFDAVYTP+ TRLL+EA E GAT+
Sbjct: 403 YHPEDGMILANTTSIGMQPKVDETPISKHALKFYSLVFDAVYTPKMTRLLKEAEESGATI 462
Query: 483 VSGVEMFIRQALGQFRLFTG 502
V+G+EMFI QA Q+ +TG
Sbjct: 463 VTGLEMFIGQAYRQYEHYTG 482
>gi|357151512|ref|XP_003575813.1| PREDICTED: bifunctional 3-dehydroquinate dehydratase/shikimate
dehydrogenase, chloroplastic-like [Brachypodium
distachyon]
Length = 549
Score = 438 bits (1127), Expect = e-120, Method: Compositional matrix adjust.
Identities = 254/512 (49%), Positives = 339/512 (66%), Gaps = 15/512 (2%)
Query: 10 LVCTQLECETTEEMQASIEQAKVEGADLVELCIDSME-FSHISEVDKLIQHP-TLPAIVS 67
L+C EM A + A GAD+ EL +D + F+ ++ L+ P LPA+V+
Sbjct: 23 LLCVPATARAPREMAAEVAAAAALGADVAELRLDRLSGFAPRRDLPALLAKPRALPALVT 82
Query: 68 YRLKSSRKSSDEACKNTCLQVLRRALDLDVEFVEMDYEVASDPLMSEIIYSR-SNTKIIV 126
YR K D + L+ A++L E+V+++ +VA D M + + K+IV
Sbjct: 83 YRPKWEGGEYD-GDDEPRFEALQLAMELGAEYVDIELKVA-DKFMKFMSGKKPEKCKLIV 140
Query: 127 SSYLNGGGKPTTEKLGDVIACMQATGADVMKLEIAVDSITDLAPVFEMLTHCQ---VPLI 183
SS+ N P+ E+LG ++A +QATGAD++K+ I D++ +F++L HCQ VP+I
Sbjct: 141 SSH-NYDNTPSAEELGSLLAQIQATGADIVKIATTATEIVDVSRMFQILVHCQEKQVPII 199
Query: 184 ALAVGSRGLISQLLGPKFGGFLVYGSL--GGKSVPGLPTLVSLKQVYQLEHINPDTKIFG 241
L + RG IS++L PKFGG+L +GSL G +S P PT L VY + I PDT++FG
Sbjct: 200 GLVMNDRGFISRVLCPKFGGYLTFGSLAKGKESAPAQPTAADLINVYNIRQIGPDTRVFG 259
Query: 242 LVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLVDDVKEFFRTYSGTDFAGFSVGIPHKEP 301
++ PVGHSK PILHN AFR + +YVP LVDD+ F TYS DFAGFS IPHKE
Sbjct: 260 IIGKPVGHSKSPILHNEAFRSVGMDAVYVPFLVDDLARFLTTYSSPDFAGFSCTIPHKEA 319
Query: 302 AVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALRERQGINGVASH 361
AV CCDEV P+A+ IGAVNTI+RR DGKLVGYNTD AISAIED +R Q + AS
Sbjct: 320 AVRCCDEVDPIARDIGAVNTIVRRS-DGKLVGYNTDYVGAISAIEDGIRASQSTHSTAS- 377
Query: 362 TSPIAGKIFVLVGAGGAGRALAFGAKSRGARVIIFNRNYERAKALADAVSGEALHFEYLH 421
P+AG++FV++GAGGAG+ALA+GAK +GARV+I NR + RA+ LA+ + G AL L
Sbjct: 378 --PLAGRLFVVIGAGGAGKALAYGAKEKGARVVIANRTFARAQELANLIGGPALTLSELE 435
Query: 422 EFFPEKGMILANASAIGMEPNSDQSPVPKEALKAYELVFDAVYTPRNTRLLREAAEVGAT 481
+ PE+GM+LAN +AIGM PN + +P+ K+ALK+Y +VFDAVYTP+ TRLLREAAE GAT
Sbjct: 436 NYHPEEGMVLANTTAIGMHPNVNDTPLSKQALKSYAVVFDAVYTPKETRLLREAAECGAT 495
Query: 482 VVSGVEMFIRQALGQFRLFTGGLAPEDFMRKL 513
VVSG+EMFIRQA+GQF FTG ++ R L
Sbjct: 496 VVSGLEMFIRQAMGQFEHFTGTPVVDNEFRAL 527
>gi|109157947|pdb|2GPT|A Chain A, Crystal Structure Of Arabidopsis Dehydroquinate
Dehydratase- Shikimate Dehydrogenase In Complex With
Tartrate And Shikimate
Length = 523
Score = 435 bits (1119), Expect = e-119, Method: Compositional matrix adjust.
Identities = 242/512 (47%), Positives = 342/512 (66%), Gaps = 5/512 (0%)
Query: 6 KNSLLVCTQLECETTEEMQASIEQAKVEGADLVELCIDSM-EFSHISEVDKLIQHPTLPA 64
KN L+C + ++ ++M +A GADLVE+ +D + +F+ + ++ +I+ LP
Sbjct: 2 KNPSLICAPVMADSIDKMVIETSKAHELGADLVEIRLDWLKDFNPLEDLKTIIKKSPLPT 61
Query: 65 IVSYRLKSSRKSSDEACKNTCLQVLRRALDLDVEFVEMDYEVASDPLMSEIIYSRSNTKI 124
+ +YR K E +N VLR A++L ++++++ +VAS+ + S K+
Sbjct: 62 LFTYRPKW-EGGQYEGDENERRDVLRLAMELGADYIDVELQVASEFIKSIDGKKPGKFKV 120
Query: 125 IVSSYLNGGGKPTTEKLGDVIACMQATGADVMKLEIAVDSITDLAPVFEMLTHCQVPLIA 184
IVSS+ N P+ E L ++A +Q TGAD++K+ I D+A +F + + QVP I
Sbjct: 121 IVSSH-NYQNTPSVEDLDGLVARIQQTGADIVKIATTAVDIADVARMFHITSKAQVPTIG 179
Query: 185 LAVGSRGLISQLLGPKFGGFLVYGSLGGKSV--PGLPTLVSLKQVYQLEHINPDTKIFGL 242
L +G RGL+S++L KFGG+L +G+L V PG PT+ L +Y I PDTK++G+
Sbjct: 180 LVMGERGLMSRILCSKFGGYLTFGTLDSSKVSAPGQPTIKDLLDLYNFRRIGPDTKVYGI 239
Query: 243 VSNPVGHSKGPILHNPAFRHTRFNGIYVPMLVDDVKEFFRTYSGTDFAGFSVGIPHKEPA 302
+ PV HSK PI+HN AF+ FNG+YV +LVD++ F + YS +DFAGFS IPHKE A
Sbjct: 240 IGKPVSHSKSPIVHNQAFKSVDFNGVYVHLLVDNLVSFLQAYSSSDFAGFSCTIPHKEAA 299
Query: 303 VACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALRERQGINGVASHT 362
+ CCDEV PLAKSIGAVNTI+RR DGKL+GYNTDC +ISAIED LR + V S +
Sbjct: 300 LQCCDEVDPLAKSIGAVNTILRRKSDGKLLGYNTDCIGSISAIEDGLRSSGDPSSVPSSS 359
Query: 363 SPIAGKIFVLVGAGGAGRALAFGAKSRGARVIIFNRNYERAKALADAVSGEALHFEYLHE 422
SP+A K V++GAGGAG+ALA+GAK +GA+V+I NR YERA LA+A+ G+AL L
Sbjct: 360 SPLASKTVVVIGAGGAGKALAYGAKEKGAKVVIANRTYERALELAEAIGGKALSLTDLDN 419
Query: 423 FFPEKGMILANASAIGMEPNSDQSPVPKEALKAYELVFDAVYTPRNTRLLREAAEVGATV 482
+ PE GM+LAN +++GM+PN +++P+ K+ALK Y LVFDAVYTPR TRLLREA E GA
Sbjct: 420 YHPEDGMVLANTTSMGMQPNVEETPISKDALKHYALVFDAVYTPRITRLLREAEESGAIT 479
Query: 483 VSGVEMFIRQALGQFRLFTGGLAPEDFMRKLV 514
VSG EMF+RQA QF +FTG AP++ +++
Sbjct: 480 VSGSEMFVRQAYEQFEIFTGLPAPKELYWQIM 511
>gi|15230703|ref|NP_187286.1| Shikimate dehydrogenase [Arabidopsis thaliana]
gi|75207269|sp|Q9SQT8.1|DHQSD_ARATH RecName: Full=Bifunctional 3-dehydroquinate dehydratase/shikimate
dehydrogenase, chloroplastic; Short=DHQ-SDH protein;
AltName: Full=DHQase-SORase; AltName: Full=Protein
EMBRYO DEFECTIVE 3004; Includes: RecName:
Full=Dehydroquinate dehydratase; Short=DHQ; Includes:
RecName: Full=Shikimate dehydrogenase; Short=SDH; Flags:
Precursor
gi|6437552|gb|AAF08579.1|AC011623_12 putative dehydroquinase shikimate dehydrogenase [Arabidopsis
thaliana]
gi|332640860|gb|AEE74381.1| Shikimate dehydrogenase [Arabidopsis thaliana]
Length = 603
Score = 435 bits (1119), Expect = e-119, Method: Compositional matrix adjust.
Identities = 242/512 (47%), Positives = 342/512 (66%), Gaps = 5/512 (0%)
Query: 6 KNSLLVCTQLECETTEEMQASIEQAKVEGADLVELCIDSM-EFSHISEVDKLIQHPTLPA 64
KN L+C + ++ ++M +A GADLVE+ +D + +F+ + ++ +I+ LP
Sbjct: 91 KNPSLICAPVMADSIDKMVIETSKAHELGADLVEIRLDWLKDFNPLEDLKTIIKKSPLPT 150
Query: 65 IVSYRLKSSRKSSDEACKNTCLQVLRRALDLDVEFVEMDYEVASDPLMSEIIYSRSNTKI 124
+ +YR K E +N VLR A++L ++++++ +VAS+ + S K+
Sbjct: 151 LFTYRPKW-EGGQYEGDENERRDVLRLAMELGADYIDVELQVASEFIKSIDGKKPGKFKV 209
Query: 125 IVSSYLNGGGKPTTEKLGDVIACMQATGADVMKLEIAVDSITDLAPVFEMLTHCQVPLIA 184
IVSS+ N P+ E L ++A +Q TGAD++K+ I D+A +F + + QVP I
Sbjct: 210 IVSSH-NYQNTPSVEDLDGLVARIQQTGADIVKIATTAVDIADVARMFHITSKAQVPTIG 268
Query: 185 LAVGSRGLISQLLGPKFGGFLVYGSLGGKSV--PGLPTLVSLKQVYQLEHINPDTKIFGL 242
L +G RGL+S++L KFGG+L +G+L V PG PT+ L +Y I PDTK++G+
Sbjct: 269 LVMGERGLMSRILCSKFGGYLTFGTLDSSKVSAPGQPTIKDLLDLYNFRRIGPDTKVYGI 328
Query: 243 VSNPVGHSKGPILHNPAFRHTRFNGIYVPMLVDDVKEFFRTYSGTDFAGFSVGIPHKEPA 302
+ PV HSK PI+HN AF+ FNG+YV +LVD++ F + YS +DFAGFS IPHKE A
Sbjct: 329 IGKPVSHSKSPIVHNQAFKSVDFNGVYVHLLVDNLVSFLQAYSSSDFAGFSCTIPHKEAA 388
Query: 303 VACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALRERQGINGVASHT 362
+ CCDEV PLAKSIGAVNTI+RR DGKL+GYNTDC +ISAIED LR + V S +
Sbjct: 389 LQCCDEVDPLAKSIGAVNTILRRKSDGKLLGYNTDCIGSISAIEDGLRSSGDPSSVPSSS 448
Query: 363 SPIAGKIFVLVGAGGAGRALAFGAKSRGARVIIFNRNYERAKALADAVSGEALHFEYLHE 422
SP+A K V++GAGGAG+ALA+GAK +GA+V+I NR YERA LA+A+ G+AL L
Sbjct: 449 SPLASKTVVVIGAGGAGKALAYGAKEKGAKVVIANRTYERALELAEAIGGKALSLTDLDN 508
Query: 423 FFPEKGMILANASAIGMEPNSDQSPVPKEALKAYELVFDAVYTPRNTRLLREAAEVGATV 482
+ PE GM+LAN +++GM+PN +++P+ K+ALK Y LVFDAVYTPR TRLLREA E GA
Sbjct: 509 YHPEDGMVLANTTSMGMQPNVEETPISKDALKHYALVFDAVYTPRITRLLREAEESGAIT 568
Query: 483 VSGVEMFIRQALGQFRLFTGGLAPEDFMRKLV 514
VSG EMF+RQA QF +FTG AP++ +++
Sbjct: 569 VSGSEMFVRQAYEQFEIFTGLPAPKELYWQIM 600
>gi|356574916|ref|XP_003555589.1| PREDICTED: bifunctional 3-dehydroquinate dehydratase/shikimate
dehydrogenase, chloroplastic-like [Glycine max]
Length = 630
Score = 434 bits (1115), Expect = e-119, Method: Compositional matrix adjust.
Identities = 238/514 (46%), Positives = 335/514 (65%), Gaps = 9/514 (1%)
Query: 6 KNSLLVCTQLECETTEEMQASIEQAKVEGADLVELCIDSM-EFSHISEVDKLIQHPTLPA 64
+NS L+C E+ EEM + + K GADLVE +D + +F + LI + LP
Sbjct: 117 RNSTLICASTSAESVEEMVFEMVKGKELGADLVEARLDFLNDFHPTQHLPSLINNRPLPI 176
Query: 65 IVSYR--LKSSRKSSDEACKNTCLQVLRRALDLDVEFVEMDYEVASDPLMSEIIYSRSNT 122
+++YR + DE+ + LR A++L EFV+++ +VA + S +
Sbjct: 177 LITYRPIWEGGEYDGDESQRQ---DALRLAIELGSEFVDVELKVADEFYKSIGGKKAESV 233
Query: 123 KIIVSSYLNGGGKPTTEKLGDVIACMQATGADVMKLEIAVDSITDLAPVFEMLTHCQVPL 182
KIIVSS+ N P+ E++G++ A +QATGADV+K+ ITD A +F++L H QVP+
Sbjct: 234 KIIVSSH-NLESTPSVEEIGNLAARIQATGADVVKIATTALDITDCARLFQVLVHSQVPM 292
Query: 183 IALAVGSRGLISQLLGPKFGGFLVYGSL--GGKSVPGLPTLVSLKQVYQLEHINPDTKIF 240
I +A+G +G IS++L KFGGFL +GS+ G S PG T+ L +Y I TK+
Sbjct: 293 IGIAMGEKGFISRVLCAKFGGFLTFGSIEAGAISAPGQTTIKELLDLYNFRQIGVGTKVH 352
Query: 241 GLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLVDDVKEFFRTYSGTDFAGFSVGIPHKE 300
G++ NP+GHSK P L+NPAF+ F+GIY+P+L+D+V +F TYS DF G+S IPHK+
Sbjct: 353 GVIGNPIGHSKSPHLYNPAFKSVGFDGIYLPLLIDNVSDFLNTYSSPDFVGYSYTIPHKQ 412
Query: 301 PAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALRERQGINGVAS 360
+ CCDEV P+AK+IGA++ +I+RP DG+L+GYN D AI+AIE+ L + S
Sbjct: 413 NGLRCCDEVDPIAKAIGAISCMIKRPNDGRLIGYNFDYLGAIAAIEERLHLQDSNGRSIS 472
Query: 361 HTSPIAGKIFVLVGAGGAGRALAFGAKSRGARVIIFNRNYERAKALADAVSGEALHFEYL 420
SP+ GK+FV++GAGGAG+ALA+G K +GARV++ NR Y +AK LA V GEA+ L
Sbjct: 473 GCSPLYGKLFVVMGAGGAGKALAYGGKEKGARVVVANRTYAKAKELATKVGGEAITLSEL 532
Query: 421 HEFFPEKGMILANASAIGMEPNSDQSPVPKEALKAYELVFDAVYTPRNTRLLREAAEVGA 480
F PE+GMILAN +++GM+P D +P+PKEALK Y LVFDA+YTP+ TRLLREA E GA
Sbjct: 533 ESFHPEQGMILANTTSVGMKPKIDLTPIPKEALKHYSLVFDAIYTPKLTRLLREAQETGA 592
Query: 481 TVVSGVEMFIRQALGQFRLFTGGLAPEDFMRKLV 514
+V G EMFI QA QF +FT AP+ MR ++
Sbjct: 593 AIVYGTEMFINQAFMQFEMFTKLPAPKQHMRDVL 626
>gi|58041010|gb|AAW63134.1| dehydroquinate dehydratase/shikimate dehydrogenase [Arabidopsis
thaliana]
Length = 510
Score = 433 bits (1113), Expect = e-118, Method: Compositional matrix adjust.
Identities = 240/508 (47%), Positives = 340/508 (66%), Gaps = 5/508 (0%)
Query: 10 LVCTQLECETTEEMQASIEQAKVEGADLVELCIDSM-EFSHISEVDKLIQHPTLPAIVSY 68
L+C + ++ ++M +A GADLVE+ +D + +F+ + ++ +I+ LP + +Y
Sbjct: 2 LICAPVMADSIDKMVIETSKAHELGADLVEIRLDWLKDFNPLEDLKTIIKKSPLPTLFTY 61
Query: 69 RLKSSRKSSDEACKNTCLQVLRRALDLDVEFVEMDYEVASDPLMSEIIYSRSNTKIIVSS 128
R K E +N VLR A++L ++++++ +VAS+ + S K+IVSS
Sbjct: 62 RPKW-EGGQYEGDENERRDVLRLAMELGADYIDVELQVASEFIKSIDGKKPGKFKVIVSS 120
Query: 129 YLNGGGKPTTEKLGDVIACMQATGADVMKLEIAVDSITDLAPVFEMLTHCQVPLIALAVG 188
+ N P+ E L ++A +Q TGAD++K+ I D+A +F + + QVP I L +G
Sbjct: 121 H-NYQNTPSVEDLDGLVARIQQTGADIVKIATTAVDIADVARMFHITSKAQVPTIGLVMG 179
Query: 189 SRGLISQLLGPKFGGFLVYGSLGGKSV--PGLPTLVSLKQVYQLEHINPDTKIFGLVSNP 246
RGL+S++L KFGG+L +G+L V PG PT+ L +Y I PDTK++G++ P
Sbjct: 180 ERGLMSRILCSKFGGYLTFGTLDSSKVSAPGQPTIKDLLDLYNFRRIGPDTKVYGIIGKP 239
Query: 247 VGHSKGPILHNPAFRHTRFNGIYVPMLVDDVKEFFRTYSGTDFAGFSVGIPHKEPAVACC 306
V HSK PI+HN AF+ FNG+YV +LVD++ F + YS +DFAGFS IPHKE A+ CC
Sbjct: 240 VSHSKSPIVHNQAFKSVDFNGVYVHLLVDNLVSFLQAYSSSDFAGFSCTIPHKEAALQCC 299
Query: 307 DEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALRERQGINGVASHTSPIA 366
DEV PLAKSIGAVNTI+RR DGKL+GYNTDC +ISAIED LR + V S +SP+A
Sbjct: 300 DEVDPLAKSIGAVNTILRRKSDGKLLGYNTDCIGSISAIEDGLRSSGDPSSVPSSSSPLA 359
Query: 367 GKIFVLVGAGGAGRALAFGAKSRGARVIIFNRNYERAKALADAVSGEALHFEYLHEFFPE 426
K V++GAGGAG+ALA+GAK +GA+V+I NR YERA LA+A+ G+AL L + PE
Sbjct: 360 SKTVVVIGAGGAGKALAYGAKEKGAKVVIANRTYERALELAEAIGGKALSLTDLDNYHPE 419
Query: 427 KGMILANASAIGMEPNSDQSPVPKEALKAYELVFDAVYTPRNTRLLREAAEVGATVVSGV 486
GM+LAN +++GM+PN +++P+ K+ALK Y LVFDAVYTPR TRLLREA E GA VSG
Sbjct: 420 DGMVLANTTSMGMQPNVEETPISKDALKHYALVFDAVYTPRITRLLREAEESGAITVSGS 479
Query: 487 EMFIRQALGQFRLFTGGLAPEDFMRKLV 514
EMF+RQA QF +FTG AP++ +++
Sbjct: 480 EMFVRQAYEQFEIFTGLPAPKELYWQIM 507
>gi|226499578|ref|NP_001152357.1| LOC100285997 [Zea mays]
gi|195655441|gb|ACG47188.1| shikimate biosynthesis protein aroDE [Zea mays]
gi|414877457|tpg|DAA54588.1| TPA: shikimate biosynthesis protein aroDE [Zea mays]
Length = 509
Score = 433 bits (1113), Expect = e-118, Method: Compositional matrix adjust.
Identities = 249/514 (48%), Positives = 343/514 (66%), Gaps = 22/514 (4%)
Query: 10 LVCTQLECETTEEMQASIEQAKVEGADLVELCIDSME-FSHISEVDKLIQHPTLPAIVSY 68
L+C L T EEM A G D+VE+ +D ++ F + L++ LPA+V+Y
Sbjct: 3 LLCVPLVGRTVEEMITDAAAAAATGGDMVEIRLDFIQGFRPREHLPPLLRGCPLPALVTY 62
Query: 69 R--LKSSRKSSDEACKNTCLQVLRRALDLDVEFVEMDYEVASDPLMSEII-YSRSNTKII 125
R + + D+ T + LR A++L V++V+++ +VA D MS I + K+I
Sbjct: 63 RPVWEGGQYEGDD---TTRFETLRLAMELGVDYVDIELKVA-DKFMSFIAGHKPEKCKLI 118
Query: 126 VSSYLNGGGKPTTEKLGDVIACMQATGADVMKLEIAVDSITDLAPVFEMLTHCQVPLIAL 185
VSS+ N P+ E++ +++A +QA GAD++K+ I D++ +F+++ HCQVP+I L
Sbjct: 119 VSSH-NYEYTPSCEEITNLVASIQAVGADIVKVATTAKDIVDVSRMFQVMVHCQVPMIGL 177
Query: 186 AVGSRGLISQLLGPKFGGFLVYGSLGGK--SVPGLPTLVSLKQVYQLEHINPDTKIFGLV 243
+ +GL+S++L PKFGG+L +G L S G PT+ L +Y ++ I PDTKI GL+
Sbjct: 178 VMSEKGLMSRVLAPKFGGYLTFGILNATKTSASGQPTVEDLLDIYNIKCIGPDTKILGLI 237
Query: 244 SNPVGHSKGPILHNPAFRHTRFNGIYVPMLVDDVKEFFRTYSGTDFAGFSVGIPHKEPAV 303
+NPV SK PILHN + +N +Y+P+L D++ F TYS DF+GFS +P K AV
Sbjct: 238 ANPVKQSKSPILHNKCLQSIGYNAVYLPLLGDNLASFLETYSSPDFSGFSCSLPFKVDAV 297
Query: 304 ACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALRERQGINGVASH-- 361
CCDE P+AKSIGA+NTIIRRP DGKLVGYNTD AISAIED GI G S
Sbjct: 298 QCCDEHDPVAKSIGAINTIIRRP-DGKLVGYNTDYIGAISAIED------GIGGPGSKDA 350
Query: 362 -TSPIAGKIFVLVGAGGAGRALAFGAKSRGARVIIFNRNYERAKALADAVSGEALHFEYL 420
SP+AG++ V+VGAGGAG+A+A+GAK +GARV+I NR YE+A LA+A+ G+AL E L
Sbjct: 351 VISPLAGRLIVVVGAGGAGKAIAYGAKEKGARVVIANRTYEKAVRLANAIGGQALRLEDL 410
Query: 421 HEFFPEKGMILANASAIGMEPNSDQSPVPKEALKAYELVFDAVYTPRNTRLLREAAEVGA 480
F PE+GMILANA+++GM PN D +P+PK+AL Y++VFDAVY P+ TRLLREA E G
Sbjct: 411 ETFRPEEGMILANATSLGMYPNVDGTPIPKKALGFYDVVFDAVYAPKVTRLLREAEECGV 470
Query: 481 TVVSGVEMFIRQALGQFRLFTGGL-APEDFMRKL 513
VVSGVEMFIRQA+GQF FTGG+ APE MR++
Sbjct: 471 KVVSGVEMFIRQAMGQFEHFTGGIEAPESLMREI 504
>gi|45773760|gb|AAS76684.1| At3g06350 [Arabidopsis thaliana]
Length = 603
Score = 432 bits (1112), Expect = e-118, Method: Compositional matrix adjust.
Identities = 241/512 (47%), Positives = 341/512 (66%), Gaps = 5/512 (0%)
Query: 6 KNSLLVCTQLECETTEEMQASIEQAKVEGADLVELCIDSM-EFSHISEVDKLIQHPTLPA 64
KN L+C + ++ ++M +A GADLVE+ +D + +F+ + ++ +I+ LP
Sbjct: 91 KNPSLICAPVMADSIDKMVIETSKAHELGADLVEIRLDWLKDFNPLEDLKTIIKKSPLPT 150
Query: 65 IVSYRLKSSRKSSDEACKNTCLQVLRRALDLDVEFVEMDYEVASDPLMSEIIYSRSNTKI 124
+ +YR K E +N VLR A++L ++++++ +VAS+ + S K+
Sbjct: 151 LFTYRPKW-EGGQYEGDENERRDVLRLAMELGADYIDVELQVASEFIKSIDGKKPGKFKV 209
Query: 125 IVSSYLNGGGKPTTEKLGDVIACMQATGADVMKLEIAVDSITDLAPVFEMLTHCQVPLIA 184
IVSS+ N P+ E L ++A +Q TGAD++K+ I D+A +F + + QVP I
Sbjct: 210 IVSSH-NYQNTPSVEDLDGLVARIQQTGADIVKIATTAVDIADVARMFHITSKAQVPTIG 268
Query: 185 LAVGSRGLISQLLGPKFGGFLVYGSLGGKSV--PGLPTLVSLKQVYQLEHINPDTKIFGL 242
L +G RGL+S++L KFGG+L +G+L V PG PT+ L +Y I PDTK++G+
Sbjct: 269 LVMGERGLMSRILCSKFGGYLTFGTLDSSKVSAPGQPTIKDLLDLYNFRRIGPDTKVYGI 328
Query: 243 VSNPVGHSKGPILHNPAFRHTRFNGIYVPMLVDDVKEFFRTYSGTDFAGFSVGIPHKEPA 302
+ PV HSK PI+HN AF+ FNG+YV +LVD++ F + YS +DFAGFS IPHKE A
Sbjct: 329 IGKPVSHSKSPIVHNQAFKSVDFNGVYVHLLVDNLVSFLQAYSSSDFAGFSCTIPHKEAA 388
Query: 303 VACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALRERQGINGVASHT 362
+ CCDEV PLAKSIGAVNTI+RR DGKL+GYNTDC +ISAIED LR + V S +
Sbjct: 389 LQCCDEVDPLAKSIGAVNTILRRKSDGKLLGYNTDCIGSISAIEDGLRSSGDPSSVPSSS 448
Query: 363 SPIAGKIFVLVGAGGAGRALAFGAKSRGARVIIFNRNYERAKALADAVSGEALHFEYLHE 422
SP+A K V++GAGGAG+ALA+GAK +GA+V+I NR YERA LA+A+ G+AL L
Sbjct: 449 SPLASKTVVVIGAGGAGKALAYGAKEKGAKVVIANRTYERALELAEAIGGKALSLTDLDN 508
Query: 423 FFPEKGMILANASAIGMEPNSDQSPVPKEALKAYELVFDAVYTPRNTRLLREAAEVGATV 482
+ PE GM+LAN +++GM+PN +++P+ K+ALK Y LVFDAVYTPR TR LREA E GA
Sbjct: 509 YHPEDGMVLANTTSMGMQPNVEETPISKDALKHYALVFDAVYTPRITRQLREAEESGAIT 568
Query: 483 VSGVEMFIRQALGQFRLFTGGLAPEDFMRKLV 514
VSG EMF+RQA QF +FTG AP++ +++
Sbjct: 569 VSGSEMFVRQAYEQFEIFTGLPAPKELYWQIM 600
>gi|224125422|ref|XP_002319582.1| dehydroquinate dehydratase/ shikimate dehydrogenase [Populus
trichocarpa]
gi|222857958|gb|EEE95505.1| dehydroquinate dehydratase/ shikimate dehydrogenase [Populus
trichocarpa]
Length = 521
Score = 432 bits (1110), Expect = e-118, Method: Compositional matrix adjust.
Identities = 238/516 (46%), Positives = 345/516 (66%), Gaps = 16/516 (3%)
Query: 6 KNSLLVCTQLECETTEEMQASIEQAKVEGADLVELCIDSME-FSHISEVDKLIQHPTLPA 64
+NS L+C + E+ ++M +++AK GAD+ E+ +D ++ FS ++++ LI+ LP
Sbjct: 11 RNSTLICAPIMAESVDQMLVQMKRAKELGADVAEVRVDFLKNFSPRNDLEALIKQCPLPT 70
Query: 65 IVSYRLK--SSRKSSDEACKNTCLQVLRRALDLDVEFVEMDYEVASDPLMSEIIYSRS-- 120
+++YR K + DE + LQ+ A++L +F++++ +VA + I +
Sbjct: 71 LITYRPKWEGGQYDGDENKRQKALQI---AMELGADFIDIELKVAQE--FYNFIQGKKPE 125
Query: 121 NTKIIVSSYLNGGGKPTTEKLGDVIACMQATGADVMKLEIAVDSITDLAPVFEMLTHCQV 180
KIIVSS+ N P+ E++GD++A +QATGAD++K+ ITD A +F ++ + QV
Sbjct: 126 KVKIIVSSH-NYECTPSIEEIGDLVARIQATGADIVKVATTALDITDNARMFHIIVNLQV 184
Query: 181 PLIALAVGSRGLISQLLGPKFGGFLVYGSL--GGKSVPGLPTLVSLKQVYQLEHINPDTK 238
P+I L +G RGL+S++L K+G FL +GS+ G S PG PT+ L ++Y L I DTK
Sbjct: 185 PMIGLVMGERGLMSRVLAAKYGAFLTFGSIEAGVVSAPGQPTVKDLLELYNLRQIEADTK 244
Query: 239 IFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLVDDVKEFFRTYSGTDFAGFSVGIPH 298
+ G++ NP+GHSK P L+N AF+ FNGIY+P+LVD V + TYS DFAG+S IPH
Sbjct: 245 VHGVIGNPIGHSKSPHLYNAAFKSVGFNGIYLPLLVDSVANYISTYSSPDFAGYSYTIPH 304
Query: 299 KEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALRERQGINGV 358
KE + CCDEV P+AK IGA++ +IRRP DGKL GYN D AI+AIE+AL NG
Sbjct: 305 KEDGLKCCDEVDPIAKEIGAISCMIRRPDDGKLKGYNVDYLGAIAAIEEALGAS---NGA 361
Query: 359 ASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGARVIIFNRNYERAKALADAVSGEALHFE 418
+ SP+AGK+FV++GAGGAG+ALA+GA +GARV++ NR Y +AK LA V G+A+
Sbjct: 362 PASVSPLAGKLFVVMGAGGAGKALAYGAYEKGARVVVANRTYGKAKELASKVGGQAIALA 421
Query: 419 YLHEFFPEKGMILANASAIGMEPNSDQSPVPKEALKAYELVFDAVYTPRNTRLLREAAEV 478
L +F PE+GMILAN +++GM+P + +P+ KEALK Y LVFDA+YTP+ T LLREA E
Sbjct: 422 KLKDFHPEEGMILANTTSVGMKPRIEDTPLAKEALKHYALVFDAIYTPKLTTLLREAQEA 481
Query: 479 GATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRKLV 514
G+T+V G EMFI QA QF FTG AP+ +R ++
Sbjct: 482 GSTIVYGTEMFINQAFVQFERFTGLPAPKQLIRDVL 517
>gi|449503035|ref|XP_004161812.1| PREDICTED: bifunctional 3-dehydroquinate dehydratase/shikimate
dehydrogenase, chloroplastic-like [Cucumis sativus]
Length = 542
Score = 432 bits (1110), Expect = e-118, Method: Compositional matrix adjust.
Identities = 241/513 (46%), Positives = 341/513 (66%), Gaps = 10/513 (1%)
Query: 6 KNSLLVCTQLECETTEEMQASIEQAKVEGADLVELCIDSME-FSHISEVDKLIQHPTLPA 64
+NS LVC + ++ + M A +AK GADLVE+ +DS++ F+ +++ L++ LP
Sbjct: 30 RNSSLVCVPIMADSADLMIADARKAKTSGADLVEIRLDSLKIFNQQTDLGTLVKECPLPT 89
Query: 65 IVSYRLKSSRKSSDEACKNTCLQVLRRALDLDVEFVEMDYEVASDPLMSEIIYSRSNTKI 124
+ +YR K D +N L+VLR ++L ++V+++ +VA + + S K+
Sbjct: 90 LFTYRPKWEGGQYD-GDENERLEVLRLVMELGADYVDVELQVAREFIDSIRGKKPEKCKV 148
Query: 125 IVSSYLNGGGKPTTEKLGDVIACMQATGADVMKLEIAVDSITDLAPVFEMLTHCQVPLIA 184
IVSS+ N P+ + LG ++A +Q +GAD++K+ ITD++ +F ++ H QVPLI
Sbjct: 149 IVSSH-NYEETPSLDDLGKLVARIQESGADIVKIATTARDITDVSRIFHIIVHSQVPLIG 207
Query: 185 LAVGSRGLISQLLGPKFGGFLVYGSL--GGKSVPGLPTLVSLKQVYQLEHINPDTKIFGL 242
L +G RGLIS++L KFGG+L + +L G S PG PT+ L +Y I PDTK++G+
Sbjct: 208 LVMGERGLISRILCAKFGGYLTFATLEAGIVSAPGQPTIQDLLTLYNFRQIGPDTKVYGI 267
Query: 243 VSNPVGHSKGPILHNPAFRHTRFNGIYVPMLVDDVKEFFRTYSGTDFAGFSVGIPHKEPA 302
+ PVGHSK P+L N AF+ RFNG+YV LVDD+ F +TYS DFAGFS IPHKE A
Sbjct: 268 IGKPVGHSKSPMLFNEAFKSIRFNGVYVHYLVDDIVNFLQTYSSLDFAGFSCTIPHKEAA 327
Query: 303 VACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALRERQG-INGVASH 361
CDEV P+AKSIGAVN I+RR DGK GYNTD AISAIE+ L QG G
Sbjct: 328 AKFCDEVDPVAKSIGAVNCIVRRH-DGKFCGYNTDYVGAISAIEEKL---QGDYTGSPLS 383
Query: 362 TSPIAGKIFVLVGAGGAGRALAFGAKSRGARVIIFNRNYERAKALADAVSGEALHFEYLH 421
SP+ G++FV++GAGGAG+ALA+GAK +GA+V+I NR YERAK LAD + G+A+ L+
Sbjct: 384 GSPLFGRLFVVIGAGGAGKALAYGAKEKGAKVMIANRTYERAKELADTIGGDAITLADLN 443
Query: 422 EFFPEKGMILANASAIGMEPNSDQSPVPKEALKAYELVFDAVYTPRNTRLLREAAEVGAT 481
F PE MILAN ++IGM+P +++P+ K+AL+ Y LVFDAVYTP TRLL++A GA
Sbjct: 444 NFHPEDNMILANTTSIGMQPKVEETPIAKDALRYYSLVFDAVYTPVMTRLLKDAEASGAK 503
Query: 482 VVSGVEMFIRQALGQFRLFTGGLAPEDFMRKLV 514
+V+G+EMF+ QA Q+ FTG AP++ RK++
Sbjct: 504 IVTGLEMFVGQAYEQYERFTGMPAPKELFRKIM 536
>gi|54290767|dbj|BAD61388.1| putative dehydroquinate dehydratase [Oryza sativa Japonica Group]
gi|125570444|gb|EAZ11959.1| hypothetical protein OsJ_01832 [Oryza sativa Japonica Group]
Length = 509
Score = 432 bits (1110), Expect = e-118, Method: Compositional matrix adjust.
Identities = 253/514 (49%), Positives = 346/514 (67%), Gaps = 22/514 (4%)
Query: 10 LVCTQLECETTEEMQASIEQAKVEGADLVELCIDSME-FSHISEVDKLIQHPTLPAIVSY 68
L+C L T E MQA A GADLVE+ +D +E F + L++ LPA+V+Y
Sbjct: 3 LLCVPLVSRTVEAMQADAAAAAAAGADLVEIRLDFIEGFRPREHLPSLLRGCPLPALVTY 62
Query: 69 R--LKSSRKSSDEACKNTCLQVLRRALDLDVEFVEMDYEVASDPLMSEIIYSR-SNTKII 125
R + + D+A + + LR A++L V++V+++ +VA D +S I S+ K+I
Sbjct: 63 RPNWEGGQYDGDDATR---FEALRLAMELGVDYVDIELKVA-DKFISFISGSKPEKCKLI 118
Query: 126 VSSYLNGGGKPTTEKLGDVIACMQATGADVMKLEIAVDSITDLAPVFEMLTHCQVPLIAL 185
VSS+ N P+ E+L D++A +QA G+D++K+ I D++ +F+++ HCQVP+I L
Sbjct: 119 VSSH-NYESTPSCEELADLVARIQAVGSDIVKIATTASDIADVSRMFQVMVHCQVPMIGL 177
Query: 186 AVGSRGLISQLLGPKFGGFLVYGSLGGK--SVPGLPTLVSLKQVYQLEHINPDTKIFGLV 243
+G +GL+S++L PKFGG+L +G+L S PG PT+ L +Y + I PDTK+ GL+
Sbjct: 178 VMGEKGLMSRVLSPKFGGYLTFGTLDATKISAPGQPTVKELLDIYNIRRIGPDTKVLGLI 237
Query: 244 SNPVGHSKGPILHNPAFRHTRFNGIYVPMLVDDVKEFFRTYSGTDFAGFSVGIPHKEPAV 303
+NPV SK PILHN + +N +Y+P+L DD+ F TYS DF+GFS +P K AV
Sbjct: 238 ANPVKQSKSPILHNKCLQSIGYNAVYLPLLADDLARFLSTYSSPDFSGFSCSLPFKVDAV 297
Query: 304 ACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALRERQGINGVASH-- 361
CC E P+AKSIGA+NTIIRRP DGKLVGYNTD AISAIED GI G S
Sbjct: 298 QCCHEHDPVAKSIGAINTIIRRP-DGKLVGYNTDYIGAISAIED------GIGGPGSKDA 350
Query: 362 -TSPIAGKIFVLVGAGGAGRALAFGAKSRGARVIIFNRNYERAKALADAVSGEALHFEYL 420
SP+AG++ V+VGAGGAG+A+A+GAK +GARV++ NR YE+A +LA AV G AL L
Sbjct: 351 AISPLAGRLVVVVGAGGAGKAIAYGAKEKGARVVVANRTYEKAVSLAAAVGGHALRLAEL 410
Query: 421 HEFFPEKGMILANASAIGMEPNSDQSPVPKEALKAYELVFDAVYTPRNTRLLREAAEVGA 480
F PE+GMILANA+++GM PN D +P+PK+AL Y++VFDAVY P+ TRLLREA E G
Sbjct: 411 ETFRPEEGMILANATSLGMYPNVDGTPIPKKALSFYDVVFDAVYAPKVTRLLREAEECGI 470
Query: 481 TVVSGVEMFIRQALGQFRLFTGGL-APEDFMRKL 513
VVSGVEMF+RQA+GQF FTGG+ APE MR++
Sbjct: 471 KVVSGVEMFVRQAMGQFEHFTGGIEAPESLMREI 504
>gi|115436640|ref|NP_001043078.1| Os01g0375200 [Oryza sativa Japonica Group]
gi|113532609|dbj|BAF04992.1| Os01g0375200, partial [Oryza sativa Japonica Group]
Length = 572
Score = 431 bits (1108), Expect = e-118, Method: Compositional matrix adjust.
Identities = 253/514 (49%), Positives = 346/514 (67%), Gaps = 22/514 (4%)
Query: 10 LVCTQLECETTEEMQASIEQAKVEGADLVELCIDSME-FSHISEVDKLIQHPTLPAIVSY 68
L+C L T E MQA A GADLVE+ +D +E F + L++ LPA+V+Y
Sbjct: 66 LLCVPLVSRTVEAMQADAAAAAAAGADLVEIRLDFIEGFRPREHLPSLLRGCPLPALVTY 125
Query: 69 R--LKSSRKSSDEACKNTCLQVLRRALDLDVEFVEMDYEVASDPLMSEIIYSR-SNTKII 125
R + + D+A + + LR A++L V++V+++ +VA D +S I S+ K+I
Sbjct: 126 RPNWEGGQYDGDDATR---FEALRLAMELGVDYVDIELKVA-DKFISFISGSKPEKCKLI 181
Query: 126 VSSYLNGGGKPTTEKLGDVIACMQATGADVMKLEIAVDSITDLAPVFEMLTHCQVPLIAL 185
VSS+ N P+ E+L D++A +QA G+D++K+ I D++ +F+++ HCQVP+I L
Sbjct: 182 VSSH-NYESTPSCEELADLVARIQAVGSDIVKIATTASDIADVSRMFQVMVHCQVPMIGL 240
Query: 186 AVGSRGLISQLLGPKFGGFLVYGSLGGK--SVPGLPTLVSLKQVYQLEHINPDTKIFGLV 243
+G +GL+S++L PKFGG+L +G+L S PG PT+ L +Y + I PDTK+ GL+
Sbjct: 241 VMGEKGLMSRVLSPKFGGYLTFGTLDATKISAPGQPTVKELLDIYNIRRIGPDTKVLGLI 300
Query: 244 SNPVGHSKGPILHNPAFRHTRFNGIYVPMLVDDVKEFFRTYSGTDFAGFSVGIPHKEPAV 303
+NPV SK PILHN + +N +Y+P+L DD+ F TYS DF+GFS +P K AV
Sbjct: 301 ANPVKQSKSPILHNKCLQSIGYNAVYLPLLADDLARFLSTYSSPDFSGFSCSLPFKVDAV 360
Query: 304 ACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALRERQGINGVASH-- 361
CC E P+AKSIGA+NTIIRRP DGKLVGYNTD AISAIED GI G S
Sbjct: 361 QCCHEHDPVAKSIGAINTIIRRP-DGKLVGYNTDYIGAISAIED------GIGGPGSKDA 413
Query: 362 -TSPIAGKIFVLVGAGGAGRALAFGAKSRGARVIIFNRNYERAKALADAVSGEALHFEYL 420
SP+AG++ V+VGAGGAG+A+A+GAK +GARV++ NR YE+A +LA AV G AL L
Sbjct: 414 AISPLAGRLVVVVGAGGAGKAIAYGAKEKGARVVVANRTYEKAVSLAAAVGGHALRLAEL 473
Query: 421 HEFFPEKGMILANASAIGMEPNSDQSPVPKEALKAYELVFDAVYTPRNTRLLREAAEVGA 480
F PE+GMILANA+++GM PN D +P+PK+AL Y++VFDAVY P+ TRLLREA E G
Sbjct: 474 ETFRPEEGMILANATSLGMYPNVDGTPIPKKALSFYDVVFDAVYAPKVTRLLREAEECGI 533
Query: 481 TVVSGVEMFIRQALGQFRLFTGGL-APEDFMRKL 513
VVSGVEMF+RQA+GQF FTGG+ APE MR++
Sbjct: 534 KVVSGVEMFVRQAMGQFEHFTGGIEAPESLMREI 567
>gi|356577650|ref|XP_003556937.1| PREDICTED: LOW QUALITY PROTEIN: bifunctional 3-dehydroquinate
dehydratase/shikimate dehydrogenase, chloroplastic-like
[Glycine max]
Length = 479
Score = 431 bits (1107), Expect = e-118, Method: Compositional matrix adjust.
Identities = 219/442 (49%), Positives = 303/442 (68%), Gaps = 11/442 (2%)
Query: 79 EACKNTCLQVLRRALDLDVEFVEMDYEVASDPLMSEIIYSRSNTKIIVSSYLNGGGKPTT 138
+ +N L LR A++L ++V++ +VA + S + + TK+IVSS+ N P+
Sbjct: 40 DGGENKRLDALRLAMELGADYVDVQLQVAYEFYDSIRGKTFNKTKVIVSSH-NYQLTPSM 98
Query: 139 EKLGDVIACMQATGADVMKLEIAVDSITDLAPVFEMLTHCQVPLIALAVGSRGLISQLLG 198
E LG+++A +QATGAD++K+ ITD+A +F+++ H QVP I L G RGLIS +L
Sbjct: 99 EDLGNLVARIQATGADIVKIATTALDITDVARMFQIMVHSQVPFIGLVCGDRGLISHILC 158
Query: 199 PKFGGFLVYGSLGGK--SVPGLPTLVSLKQVYQLEHIN----PDTKIFGLVSNPVGHSKG 252
KFGG++ +G+L + S G PTL L +Y L ++ PDTK+FG++ PV HSK
Sbjct: 159 AKFGGYVTFGTLESRVVSASGQPTLKDLLYLYNLRQLSNKLTPDTKVFGIIGKPVSHSKS 218
Query: 253 PILHNPAFRHTRFNGIYVPMLVDDVKEFFRTYSGTDFAGFSVGIPHKEPAVACCDEVHPL 312
PIL N F+ NG+YV +LVDD+ F R YS T+F GF V IPHKE A+ CCDEV P+
Sbjct: 219 PILFNEVFKSIGLNGVYVFLLVDDLANFLRAYSSTEFVGFGVTIPHKEAAIKCCDEVDPV 278
Query: 313 AKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALRERQGINGVASHTSPIAGKIFVL 372
AKSIGAVN I+RRP DGKL+GYNTD A++AIED LR + NG ++ SP+A K+FV+
Sbjct: 279 AKSIGAVNCIVRRPTDGKLIGYNTDYVGAVTAIEDGLRGKH--NGSSTTISPLASKLFVV 336
Query: 373 VGAGGAGRALAFGAKSRGARVIIFNRNYERAKALADAVSGEALHFEYLHEFFPEKGMILA 432
+GA AG+ALA+GAK++GARV+I NR ++RA+ LADA+ G+AL L + PE GMIL
Sbjct: 337 IGADVAGKALAYGAKAKGARVVIANRTFDRARELADAIGGDALALSDLDNYHPEDGMILT 396
Query: 433 NASAIGMEPNSDQSPVPKEALKAYELVFDAVYTPRNTRLLREAAEVGATVVSGVEMFIRQ 492
N ++IGM+P D+ PV K ALK Y LVFDAV TP+ TRLL+EA E GAT+V+G+EMF+ +
Sbjct: 397 NTTSIGMQPKVDEKPVSKHALKYYSLVFDAVNTPKITRLLKEAEESGATIVTGLEMFMGR 456
Query: 493 ALGQFRLFTGGLAPEDFMRKLV 514
Q+ FTG AP++ RK++
Sbjct: 457 X--QYENFTGLRAPKELFRKIM 476
>gi|357132175|ref|XP_003567707.1| PREDICTED: bifunctional 3-dehydroquinate dehydratase/shikimate
dehydrogenase, chloroplastic-like [Brachypodium
distachyon]
Length = 509
Score = 430 bits (1106), Expect = e-118, Method: Compositional matrix adjust.
Identities = 245/513 (47%), Positives = 336/513 (65%), Gaps = 20/513 (3%)
Query: 10 LVCTQLECETTEEMQASIEQAKVEGADLVELCIDSME-FSHISEVDKLIQHPTLPAIVSY 68
L+C L T EEM+ A G DLVE+ +D +E F + +L+ LPA+V+Y
Sbjct: 3 LLCVPLVARTVEEMETDAAAAAAAGGDLVEIRLDFIEGFRPREHLPRLLHGCPLPALVTY 62
Query: 69 R--LKSSRKSSDEACKNTCLQVLRRALDLDVEFVEMDYEVASDPLMSEIIYSRSNTKIIV 126
R + R D+A + + LR A++L +V+++ +VA + Y K+IV
Sbjct: 63 RPNWEGGRYDGDDATR---FETLRLAMELGAVYVDIELKVADKFINFLSGYKPEKCKLIV 119
Query: 127 SSYLNGGGKPTTEKLGDVIACMQATGADVMKLEIAVDSITDLAPVFEMLTHCQVPLIALA 186
SS+ N P+ E+L +++A +QA GAD++K+ I D++ +F+++ HCQVP+I L
Sbjct: 120 SSH-NYESTPSCEELANLVARIQAVGADIVKVATTATDIVDVSRMFQVMVHCQVPMIGLV 178
Query: 187 VGSRGLISQLLGPKFGGFLVYGSLG--GKSVPGLPTLVSLKQVYQLEHINPDTKIFGLVS 244
+ RGL+S++L PKFGG+L +G L S G PT+ L +Y + I PDTK+ GLV+
Sbjct: 179 MSERGLMSRVLSPKFGGYLTFGILDTTKTSASGQPTVEELLDIYNIRSIGPDTKVLGLVA 238
Query: 245 NPVGHSKGPILHNPAFRHTRFNGIYVPMLVDDVKEFFRTYSGTDFAGFSVGIPHKEPAVA 304
NPV SK PILHN + ++ +Y+P+L DD+ F TYS DF+GFS +P K AV
Sbjct: 239 NPVKQSKSPILHNKCLQSVGYDAVYLPLLADDLARFLDTYSSPDFSGFSCSLPFKVDAVH 298
Query: 305 CCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALRERQGINGVASH--- 361
CC E +AKSIGA+NTIIR+P DGKLVGYNTD AISAIED GI G S
Sbjct: 299 CCHEHDTVAKSIGAINTIIRKP-DGKLVGYNTDYIGAISAIED------GIGGPGSKDAA 351
Query: 362 TSPIAGKIFVLVGAGGAGRALAFGAKSRGARVIIFNRNYERAKALADAVSGEALHFEYLH 421
SP+AG++ V+VGAGGAG+A+A+GAK +GARV++ NR YE+A LA+AV G+AL L
Sbjct: 352 VSPLAGRLIVVVGAGGAGKAIAYGAKKKGARVVVANRTYEKAVGLANAVGGQALRLADLE 411
Query: 422 EFFPEKGMILANASAIGMEPNSDQSPVPKEALKAYELVFDAVYTPRNTRLLREAAEVGAT 481
F PE GMILANA+++GM PN D +P+PK+AL +Y++VFDAVY P+ TRLLREA E G
Sbjct: 412 NFRPEGGMILANATSLGMYPNVDGTPIPKKALSSYDVVFDAVYAPKVTRLLREAEEQGIK 471
Query: 482 VVSGVEMFIRQALGQFRLFTGGL-APEDFMRKL 513
VVSGVEMF+RQA+GQF FTGG+ APE MR++
Sbjct: 472 VVSGVEMFVRQAMGQFEHFTGGIEAPESLMREI 504
>gi|218188248|gb|EEC70675.1| hypothetical protein OsI_01994 [Oryza sativa Indica Group]
Length = 509
Score = 429 bits (1102), Expect = e-117, Method: Compositional matrix adjust.
Identities = 251/514 (48%), Positives = 345/514 (67%), Gaps = 22/514 (4%)
Query: 10 LVCTQLECETTEEMQASIEQAKVEGADLVELCIDSME-FSHISEVDKLIQHPTLPAIVSY 68
L+C L T E MQA A GADLVE+ +D +E F + L++ +PA+V+Y
Sbjct: 3 LLCVPLVSRTVEAMQADAAAAAAAGADLVEIRLDFIEGFRPREHLPSLLRGCPIPALVTY 62
Query: 69 R--LKSSRKSSDEACKNTCLQVLRRALDLDVEFVEMDYEVASDPLMSEIIYSR-SNTKII 125
R + + D+A + + LR A++L V++V+++ +VA D +S I S+ K+I
Sbjct: 63 RPNWEGGQYDGDDATR---FEALRLAMELGVDYVDIELKVA-DKFISFISGSKPEKCKLI 118
Query: 126 VSSYLNGGGKPTTEKLGDVIACMQATGADVMKLEIAVDSITDLAPVFEMLTHCQVPLIAL 185
VSS+ N P+ E+L D++A +QA G+D++K+ I D++ +F+++ HCQVP+I L
Sbjct: 119 VSSH-NYESTPSCEELADLVARIQAVGSDIVKIATTASDIADVSRMFQVMVHCQVPMIGL 177
Query: 186 AVGSRGLISQLLGPKFGGFLVYGSLGGK--SVPGLPTLVSLKQVYQLEHINPDTKIFGLV 243
+ +GL+S++L PKFGG+L +G+L S PG PT+ L +Y + I PDTK+ GL+
Sbjct: 178 VMSEKGLMSRVLSPKFGGYLTFGTLDATKISAPGQPTVKELLDIYNIRRIGPDTKVLGLI 237
Query: 244 SNPVGHSKGPILHNPAFRHTRFNGIYVPMLVDDVKEFFRTYSGTDFAGFSVGIPHKEPAV 303
+NPV SK PILHN + +N +Y+P+L DD+ F TYS DF+GFS +P K AV
Sbjct: 238 ANPVKQSKSPILHNKCLQSIGYNAVYLPLLADDLARFLSTYSSPDFSGFSCSLPFKVDAV 297
Query: 304 ACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALRERQGINGVASH-- 361
CC E P+AKSIGA+NTIIRRP DGKLVGYNTD AISAIED GI G S
Sbjct: 298 QCCHEHDPVAKSIGAINTIIRRP-DGKLVGYNTDYIGAISAIED------GIGGPGSKDA 350
Query: 362 -TSPIAGKIFVLVGAGGAGRALAFGAKSRGARVIIFNRNYERAKALADAVSGEALHFEYL 420
SP+AG++ V+VGAGGAG+A+A+GAK +GARV++ NR YE+A +LA AV G AL L
Sbjct: 351 AISPLAGRLVVVVGAGGAGKAIAYGAKEKGARVVVANRTYEKAVSLAAAVGGHALRLAEL 410
Query: 421 HEFFPEKGMILANASAIGMEPNSDQSPVPKEALKAYELVFDAVYTPRNTRLLREAAEVGA 480
F PE+GMILANA+++GM PN D +P+PK+AL Y++VFDAVY P+ TRLLREA E G
Sbjct: 411 ETFRPEEGMILANATSLGMYPNVDGTPIPKKALSFYDVVFDAVYAPKVTRLLREAEECGI 470
Query: 481 TVVSGVEMFIRQALGQFRLFTGGL-APEDFMRKL 513
VVSGVEMF+RQA+GQF FTGG+ APE MR++
Sbjct: 471 KVVSGVEMFVRQAMGQFEHFTGGIEAPESLMREI 504
>gi|242053027|ref|XP_002455659.1| hypothetical protein SORBIDRAFT_03g018040 [Sorghum bicolor]
gi|241927634|gb|EES00779.1| hypothetical protein SORBIDRAFT_03g018040 [Sorghum bicolor]
Length = 509
Score = 427 bits (1098), Expect = e-117, Method: Compositional matrix adjust.
Identities = 250/514 (48%), Positives = 345/514 (67%), Gaps = 22/514 (4%)
Query: 10 LVCTQLECETTEEMQASIEQAKVEGADLVELCIDSME-FSHISEVDKLIQHPTLPAIVSY 68
L+C L T EEM A A G D+VE+ +D ++ F + L + LPA+V+Y
Sbjct: 3 LLCVPLVGRTVEEMIADAAAAAATGGDMVEIRLDFIQGFRPREHLPPLFRSCPLPALVTY 62
Query: 69 R--LKSSRKSSDEACKNTCLQVLRRALDLDVEFVEMDYEVASDPLMSEII-YSRSNTKII 125
R + + D+ T + LR A++L V++V+++ +VA D MS I + K+I
Sbjct: 63 RPVWEGGQYEGDD---TTRFETLRLAMELGVDYVDIELKVA-DKFMSFISGHKPEKCKLI 118
Query: 126 VSSYLNGGGKPTTEKLGDVIACMQATGADVMKLEIAVDSITDLAPVFEMLTHCQVPLIAL 185
VSS+ N P+ E++ +++A +QA GAD++K+ I D++ +F+++ HCQVP+I L
Sbjct: 119 VSSH-NYEYTPSCEEITNLVARIQAVGADIVKVATTAKDIVDVSRMFQVMVHCQVPMIGL 177
Query: 186 AVGSRGLISQLLGPKFGGFLVYGSLGGK--SVPGLPTLVSLKQVYQLEHINPDTKIFGLV 243
+ RGL+S++L PKFGG+L +G L S G PT+ L +Y ++ I PDTK+ GL+
Sbjct: 178 VMSERGLMSRVLAPKFGGYLTFGILNATKTSASGQPTVEDLLNIYNIKCIGPDTKVLGLI 237
Query: 244 SNPVGHSKGPILHNPAFRHTRFNGIYVPMLVDDVKEFFRTYSGTDFAGFSVGIPHKEPAV 303
+NPV SK PILHN + +N +Y+P+L D++ F TYS DF+GFS +P K AV
Sbjct: 238 ANPVKQSKSPILHNKCLQSIGYNAVYLPLLGDNLASFLETYSSPDFSGFSCSLPFKVDAV 297
Query: 304 ACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALRERQGINGVASH-- 361
CCDE P+AKSIGA+NTIIRRP DGKLVGYNTD AISAIED GI G S
Sbjct: 298 QCCDEHDPVAKSIGAINTIIRRP-DGKLVGYNTDYIGAISAIED------GIGGPGSKDA 350
Query: 362 -TSPIAGKIFVLVGAGGAGRALAFGAKSRGARVIIFNRNYERAKALADAVSGEALHFEYL 420
+SP+AG++ V+VGAGGAG+A+A+GAK +GARV+I NR YE+A +LA+A+ G+AL E L
Sbjct: 351 ASSPLAGRLVVVVGAGGAGKAIAYGAKEKGARVVIANRTYEKAVSLANAIGGQALRLEDL 410
Query: 421 HEFFPEKGMILANASAIGMEPNSDQSPVPKEALKAYELVFDAVYTPRNTRLLREAAEVGA 480
F PE+GMILANA+++GM PN D +P+PK+AL Y++VFDAVY P+ TRLLREA E G
Sbjct: 411 ETFRPEEGMILANATSLGMYPNVDGTPIPKKALGFYDVVFDAVYAPKVTRLLREAEECGV 470
Query: 481 TVVSGVEMFIRQALGQFRLFTGGL-APEDFMRKL 513
VVSGVEMFIRQA+GQF FTGG+ APE MR++
Sbjct: 471 KVVSGVEMFIRQAMGQFERFTGGIEAPECLMREI 504
>gi|160877702|pdb|2O7Q|A Chain A, Crystal Structure Of The A. Thaliana
Dhq-Dehydroshikimate-Sdh- Shikimate-Nadp(H)
gi|160877703|pdb|2O7S|A Chain A, Crystal Structure Of The A. Thaliana
Dhq-dehydroshikimate-sdh- Shikimate-nadp(h)
Length = 523
Score = 427 bits (1097), Expect = e-117, Method: Compositional matrix adjust.
Identities = 240/512 (46%), Positives = 340/512 (66%), Gaps = 5/512 (0%)
Query: 6 KNSLLVCTQLECETTEEMQASIEQAKVEGADLVELCIDSM-EFSHISEVDKLIQHPTLPA 64
KN L+C + ++ ++M +A GADLVE+ +D + +F+ + ++ +I+ LP
Sbjct: 2 KNPSLICAPVMADSIDKMVIETSKAHELGADLVEIRLDWLKDFNPLEDLKTIIKKSPLPT 61
Query: 65 IVSYRLKSSRKSSDEACKNTCLQVLRRALDLDVEFVEMDYEVASDPLMSEIIYSRSNTKI 124
+ +YR K E +N VLR A++L ++++++ +VAS+ + S K+
Sbjct: 62 LFTYRPKW-EGGQYEGDENERRDVLRLAMELGADYIDVELQVASEFIKSIDGKKPGKFKV 120
Query: 125 IVSSYLNGGGKPTTEKLGDVIACMQATGADVMKLEIAVDSITDLAPVFEMLTHCQVPLIA 184
IVSS+ N P+ E L ++A +Q TGAD++K+ I D+A +F + + QVP I
Sbjct: 121 IVSSH-NYQNTPSVEDLDGLVARIQQTGADIVKIATTAVDIADVARMFHITSKAQVPTIG 179
Query: 185 LAVGSRGLISQLLGPKFGGFLVYGSLGGKSV--PGLPTLVSLKQVYQLEHINPDTKIFGL 242
L +G RGL+S++L KFGG+L +G+L V PG PT+ L +Y I PDTK++G+
Sbjct: 180 LVMGERGLMSRILCSKFGGYLTFGTLDSSKVSAPGQPTIKDLLDLYNFRRIGPDTKVYGI 239
Query: 243 VSNPVGHSKGPILHNPAFRHTRFNGIYVPMLVDDVKEFFRTYSGTDFAGFSVGIPHKEPA 302
+ PV HSK PI+HN AF+ FNG+YV +LVD++ F + YS +DFAGFS IPHKE A
Sbjct: 240 IGKPVSHSKSPIVHNQAFKSVDFNGVYVHLLVDNLVSFLQAYSSSDFAGFSCTIPHKEAA 299
Query: 303 VACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALRERQGINGVASHT 362
+ CDEV PLAKSIGAVNTI+RR DGKL+GYNTD +ISAIED LR + V S +
Sbjct: 300 LQXCDEVDPLAKSIGAVNTILRRKSDGKLLGYNTDXIGSISAIEDGLRSSGDPSSVPSSS 359
Query: 363 SPIAGKIFVLVGAGGAGRALAFGAKSRGARVIIFNRNYERAKALADAVSGEALHFEYLHE 422
SP+A K V++GAGGAG+ALA+GAK +GA+V+I NR YERA LA+A+ G+AL L
Sbjct: 360 SPLASKTVVVIGAGGAGKALAYGAKEKGAKVVIANRTYERALELAEAIGGKALSLTDLDN 419
Query: 423 FFPEKGMILANASAIGMEPNSDQSPVPKEALKAYELVFDAVYTPRNTRLLREAAEVGATV 482
+ PE GM+LAN +++GM+PN +++P+ K+ALK Y LVFDAVYTPR TRLLREA E GA
Sbjct: 420 YHPEDGMVLANTTSMGMQPNVEETPISKDALKHYALVFDAVYTPRITRLLREAEESGAIT 479
Query: 483 VSGVEMFIRQALGQFRLFTGGLAPEDFMRKLV 514
VSG EMF+RQA QF +FTG AP++ +++
Sbjct: 480 VSGSEMFVRQAYEQFEIFTGLPAPKELYWQIM 511
>gi|449461453|ref|XP_004148456.1| PREDICTED: bifunctional 3-dehydroquinate dehydratase/shikimate
dehydrogenase, chloroplastic-like [Cucumis sativus]
Length = 542
Score = 427 bits (1097), Expect = e-117, Method: Compositional matrix adjust.
Identities = 239/513 (46%), Positives = 339/513 (66%), Gaps = 10/513 (1%)
Query: 6 KNSLLVCTQLECETTEEMQASIEQAKVEGADLVELCIDSME-FSHISEVDKLIQHPTLPA 64
+NS LVC + ++ + M A +AK GADLVE+ +DS++ F+ +++ L++ LP
Sbjct: 30 RNSSLVCVPIMADSADLMIADARKAKTSGADLVEIRLDSLKIFNQQTDLGTLVKECPLPT 89
Query: 65 IVSYRLKSSRKSSDEACKNTCLQVLRRALDLDVEFVEMDYEVASDPLMSEIIYSRSNTKI 124
+ +YR K D +N L+VLR ++L ++V+++ +VA + + S K+
Sbjct: 90 LFTYRPKWEGGQYD-GDENERLEVLRLVMELGADYVDVELQVAREFIDSIRGKKPEKCKV 148
Query: 125 IVSSYLNGGGKPTTEKLGDVIACMQATGADVMKLEIAVDSITDLAPVFEMLTHCQVPLIA 184
IVSS+ N P+ + LG ++A +Q +GAD++K+ ITD++ +F ++ H QVPLI
Sbjct: 149 IVSSH-NYEETPSLDDLGKLVARIQESGADIVKIATTARDITDVSRIFHIIVHSQVPLIG 207
Query: 185 LAVGSRGLISQLLGPKFGGFLVYGSL--GGKSVPGLPTLVSLKQVYQLEHINPDTKIFGL 242
L +G RGLIS++L KFGG+L + +L G S PG PT+ L +Y I PDTK++G+
Sbjct: 208 LVMGERGLISRILCAKFGGYLTFATLEAGIVSAPGQPTIQDLLTLYNFRQIGPDTKVYGI 267
Query: 243 VSNPVGHSKGPILHNPAFRHTRFNGIYVPMLVDDVKEFFRTYSGTDFAGFSVGIPHKEPA 302
+ PVGHSK P+L N AF+ RFNG+YV LVDD+ F +TYS DFAGFS IPHKE A
Sbjct: 268 IGKPVGHSKSPMLFNEAFKSIRFNGVYVHYLVDDIVNFLQTYSSLDFAGFSCTIPHKEAA 327
Query: 303 VACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALRERQG-INGVASH 361
CDEV P+AK I AVN I+RR DGK GYNTD AISAIE+ L QG G
Sbjct: 328 AKFCDEVDPVAKVIXAVNCIVRRH-DGKFCGYNTDYVGAISAIEEKL---QGDYTGSPLS 383
Query: 362 TSPIAGKIFVLVGAGGAGRALAFGAKSRGARVIIFNRNYERAKALADAVSGEALHFEYLH 421
SP+ G++FV++GAGGAG+ALA+GAK +GA+V+I NR YERAK LAD + G+A+ L+
Sbjct: 384 GSPLFGRLFVVIGAGGAGKALAYGAKEKGAKVMIANRTYERAKELADTIGGDAITLADLN 443
Query: 422 EFFPEKGMILANASAIGMEPNSDQSPVPKEALKAYELVFDAVYTPRNTRLLREAAEVGAT 481
F PE MILAN ++IGM+P +++P+ K+AL+ Y LVFDAVYTP TRLL++A GA
Sbjct: 444 NFHPEDNMILANTTSIGMQPKVEETPIAKDALRYYSLVFDAVYTPVMTRLLKDAEASGAK 503
Query: 482 VVSGVEMFIRQALGQFRLFTGGLAPEDFMRKLV 514
+V+G+EMF+ QA Q+ FTG AP++ RK++
Sbjct: 504 IVTGLEMFVGQAYEQYERFTGMPAPKELFRKIM 536
>gi|54290768|dbj|BAD61389.1| putative dehydroquinate dehydratase [Oryza sativa Japonica Group]
Length = 657
Score = 424 bits (1091), Expect = e-116, Method: Compositional matrix adjust.
Identities = 244/515 (47%), Positives = 344/515 (66%), Gaps = 23/515 (4%)
Query: 10 LVCTQLECETTEEMQASIEQAKVEGADLVELCIDSM--EFSHISEVDKLIQHPTLPAIVS 67
L+C L T E M+A A GADLVE+ +D + +F ++ +L++ LPAIV+
Sbjct: 86 LLCVPLVARTVEAMRADAAAAAAAGADLVEIRLDFIGSKFRPREDLPRLLRGCPLPAIVT 145
Query: 68 YR--LKSSRKSSDEACKNTCLQVLRRALDLDVEFVEMDYEVASDPLMSEIIYSR-SNTKI 124
YR + + D+A + + LR A++L V +V+++ +VA D +S I S+ K+
Sbjct: 146 YRPNWEGGQYEGDDATR---FEALRLAMELGVNYVDIELKVA-DKFISFIYGSKPEKCKL 201
Query: 125 IVSSYLNGGGKPTTEKLGDVIACMQATGADVMKLEIAVDSITDLAPVFEMLTHCQVPLIA 184
IVS++ N P+ E+L D++A +QA GAD++K+ + I D++ +F+++ HCQVP+I
Sbjct: 202 IVSAH-NYESTPSCEELADLVARIQAVGADIVKIATTANDIVDVSQMFQVMVHCQVPMIG 260
Query: 185 LAVGSRGLISQLLGPKFGGFLVYGSLGGKSV--PGLPTLVSLKQVYQLEHINPDTKIFGL 242
L +G +GL+S++L PKFGG+L +GSL V PG PT+ L +Y + I PDTK+ G+
Sbjct: 261 LVMGEKGLMSRVLSPKFGGYLTFGSLDATKVSAPGQPTVEELIDIYDIRRIGPDTKVLGV 320
Query: 243 VSNPVGHSKGPILHNPAFRHTRFNGIYVPMLVDDVKEFFRTYSGTDFAGFSVGIPHKEPA 302
++NPV SK P+LHN + +N +Y+P+L D++ F TYS DF+GFS +P K A
Sbjct: 321 IANPVKQSKSPVLHNTCLQSVGYNAVYLPLLADNIARFLSTYSSPDFSGFSCSLPFKVDA 380
Query: 303 VACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALRERQGINGVASHT 362
V CC E P+AKSIGA++TIIRRP DGKL+GYN D AI AIED GI G S
Sbjct: 381 VQCCHEHDPVAKSIGAISTIIRRP-DGKLLGYNNDYIGAICAIED------GIGGPGSKN 433
Query: 363 ---SPIAGKIFVLVGAGGAGRALAFGAKSRGARVIIFNRNYERAKALADAVSGEALHFEY 419
+P+AG++ V+VGAGGAG+A+A+GAK +GAR+++ NR YE+A +LA AV G AL
Sbjct: 434 AAVTPLAGRLLVVVGAGGAGKAIAYGAKEKGARIVVANRTYEKAVSLAAAVGGHALRLAE 493
Query: 420 LHEFFPEKGMILANASAIGMEPNSDQSPVPKEALKAYELVFDAVYTPRNTRLLREAAEVG 479
L F PE+GMILANA+++GM PN D +P+PK+AL Y++VFDAVY P+ TRLLREA E G
Sbjct: 494 LETFRPEEGMILANATSLGMYPNVDGTPIPKQALSFYDVVFDAVYAPKVTRLLREAEECG 553
Query: 480 ATVVSGVEMFIRQALGQFRLFTGGL-APEDFMRKL 513
VVSGVEMF+RQALGQF FT G+ APE MR+
Sbjct: 554 VKVVSGVEMFLRQALGQFERFTNGIEAPESLMREF 588
>gi|168017409|ref|XP_001761240.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162687580|gb|EDQ73962.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 519
Score = 414 bits (1065), Expect = e-113, Method: Compositional matrix adjust.
Identities = 240/515 (46%), Positives = 340/515 (66%), Gaps = 22/515 (4%)
Query: 10 LVCTQLECETTEEMQASIEQAKVEGADLVELCIDSME-FSHISEVDKLIQHPTLPAIVSY 68
L+C L +T ++M +E AK GAD+ EL +D + F +++ L++ LP IV+
Sbjct: 8 LICVPLTAKTVKKMLFQLELAKESGADVAELRVDLISGFDAAADLPVLLKDKPLPVIVTP 67
Query: 69 RLK---SSRKSSDEACKNTCLQVLRRALDLDVEFVEMDYEVASDPLMSEIIYSR---SNT 122
R K K S+E+ ++ +LR A DL ++++++ +VA + + SR S T
Sbjct: 68 RAKWEGGEYKGSEESRQD----ILRMAYDLGADYIDVELKVAGGFIQE--LRSRGKDSTT 121
Query: 123 KIIVSSYLNGGGKPTTEKLGDVIACMQATGADVMKLEIAVDSITDLAPVFEMLTHCQVPL 182
KIIVS++ N P+ E++ I M ATG D++K ITD+A VF L+ + P
Sbjct: 122 KIIVSNH-NWDFTPSDEEIHATIEQMWATGGDIVKYVTTAQDITDVAQVFHFLSESKGPT 180
Query: 183 IALAVGSRGLISQLLGPKFGGFLVYGSL--GGKSVPGLPTLVSLKQVYQLEHINPDTKIF 240
I LA+G G+IS+LL PKFGG+L +G+L G +S PG PT+ L +VY+++ ++ DT ++
Sbjct: 181 IGLAMGPAGMISRLLAPKFGGYLTFGALCKGQESAPGQPTVQDLIEVYRVKSMDRDTMVY 240
Query: 241 GLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLVDDVKEFFRTYSGTDFAGFSVGIPHKE 300
G++ PV HSKGP+LHN F N +YVP+LVDD +F ++ DF GFSV IP+KE
Sbjct: 241 GVIGKPVYHSKGPVLHNKGFEELNLNKVYVPLLVDDFNKFMNVFNRPDFHGFSVTIPYKE 300
Query: 301 PAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALRERQGINGVAS 360
A+ CD V AK IGAVNT++R G+ GYNTDCE A+SAIE LR +G+A+
Sbjct: 301 DALKLCDRVENAAKIIGAVNTVVRETT-GEYQGYNTDCEGALSAIEKGLRH----SGLAN 355
Query: 361 HT-SPIAGKIFVLVGAGGAGRALAFGAKSRGARVIIFNRNYERAKALADAVSGEALHFEY 419
+ +P+ GK+FV++GAGGAG+ALA+GAK R ARV++ NRNYERAKALA++V G+A+ +
Sbjct: 356 NDETPLKGKLFVVIGAGGAGKALAYGAKERHARVVVANRNYERAKALAESVGGKAIELDQ 415
Query: 420 LHEFFPEKGMILANASAIGMEPNSDQSPVPKEALKAYELVFDAVYTPRNTRLLREAAEVG 479
L +F PE GMILAN+++IGMEP +SP+ K+AL AY LVFDAVYTP+ T+LL++AAE+G
Sbjct: 416 LSDFRPETGMILANSTSIGMEPEVTRSPIHKDALSAYALVFDAVYTPKQTQLLKDAAEMG 475
Query: 480 ATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRKLV 514
A VSG EMF QA QFR FT APE MR ++
Sbjct: 476 AVTVSGEEMFYGQAFAQFRYFTDLPAPESAMRDVI 510
>gi|226494502|ref|NP_001140289.1| uncharacterized protein LOC100272333 [Zea mays]
gi|194698862|gb|ACF83515.1| unknown [Zea mays]
gi|414878214|tpg|DAA55345.1| TPA: hypothetical protein ZEAMMB73_777854 [Zea mays]
Length = 532
Score = 405 bits (1042), Expect = e-110, Method: Compositional matrix adjust.
Identities = 222/471 (47%), Positives = 321/471 (68%), Gaps = 18/471 (3%)
Query: 56 LIQHPTLPAIVSYR--LKSSRKSSDEACKNTCLQVLRRALDLDVEFVEMDYEVASDPLMS 113
L Q +LP IV+YR + + + ++ + + L A++L E+V+++++VA D M
Sbjct: 69 LAQPRSLPVIVTYRPNWEGGQYAGEDEPR---FEALLLAMELGAEYVDVEFKVA-DKFMK 124
Query: 114 EIIYSR-SNTKIIVSSYLNGGGKPTTEKLGDVIACMQATGADVMKLEIAVDSITDLAPVF 172
+ + N K+I+S+Y + P+ +L +++A ++ATGAD++K+E I D + +F
Sbjct: 125 YLSGKKPQNCKLIISAY-DYKTTPSVHELLNLVAQIRATGADIVKIETTAADIVDTSRMF 183
Query: 173 EMLTHC---QVPLIALAVGSRGLISQLLGPKFGGFLVYGSL--GGKSVPGLPTLVSLKQV 227
++L HC QVP+I L G IS+++ K+GG+L + SL G +S PT+ L
Sbjct: 184 QVLAHCHEKQVPIIGLVRKEHGFISRIICAKYGGYLTFASLENGKESTTEQPTVADLINK 243
Query: 228 YQLEHINPDTKIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLVDDVKEFFRTYSGT 287
Y++ I PDTK+FG++ NPV HSK PI+ N AFR F+ +++P L DD+ +F T+S
Sbjct: 244 YKIRQIGPDTKVFGIIGNPVSHSKSPIVQNQAFRSVGFDAVFLPFLSDDLVQFLYTFSAP 303
Query: 288 DFAGFSVGIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIED 347
D+AGFS +PHKE A+ CCD+V P+A+ IGA+NTIIRRP DGKLVGYNTD AISAIED
Sbjct: 304 DYAGFSCTMPHKETALRCCDDVDPIARDIGAINTIIRRP-DGKLVGYNTDYSGAISAIED 362
Query: 348 ALRERQGINGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGARVIIFNRNYERAKALA 407
+R Q + + TSP+AG++FV++GAGGAG+ALA+GAK +GARV+I NR + RA+ LA
Sbjct: 363 GIRASQPTDSI---TSPLAGRLFVVIGAGGAGKALAYGAKEKGARVVIANRTFARAQELA 419
Query: 408 DAVSGEALHFEYLHEFFPEKGMILANASAIGMEPNSDQSPVPKEALKAYELVFDAVYTPR 467
+ G AL L + PEKGMILANA+++GM PN D++P+ K ALK+Y +VFDAV+ PR
Sbjct: 420 HIIGGTALTLSELESYHPEKGMILANATSVGMHPNVDETPLSKHALKSYAVVFDAVFVPR 479
Query: 468 NTRLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGL-APEDFMRKLVLEQ 517
TRLLREAA GATV+ G+EM IR + QF+LFTGG+ APE MR+ +L +
Sbjct: 480 ETRLLREAAVCGATVIDGLEMLIRLVMVQFKLFTGGMTAPERLMREAILTK 530
>gi|125525997|gb|EAY74111.1| hypothetical protein OsI_01996 [Oryza sativa Indica Group]
Length = 455
Score = 402 bits (1032), Expect = e-109, Method: Compositional matrix adjust.
Identities = 218/436 (50%), Positives = 302/436 (69%), Gaps = 16/436 (3%)
Query: 84 TCLQVLRRALDLDVEFVEMDYEVASDPLMSEIIYSR-SNTKIIVSSYLNGGGKPTTEKLG 142
T + LR A++L V +V+++ +VA D +S I S+ K+IVS++ N P+ E+L
Sbjct: 18 TRFEALRLAMELGVNYVDIELKVA-DKFISFIYGSKPEKCKLIVSAH-NYESTPSCEELA 75
Query: 143 DVIACMQATGADVMKLEIAVDSITDLAPVFEMLTHCQVPLIALAVGSRGLISQLLGPKFG 202
D++A +QA GAD++K+ + I D++ +F+++ HCQVP+I L +G +GL+S++L PKFG
Sbjct: 76 DLVARIQAVGADIVKIATTANDIVDVSQMFQVMVHCQVPMIGLVMGEKGLMSRVLSPKFG 135
Query: 203 GFLVYGSLGGKSV--PGLPTLVSLKQVYQLEHINPDTKIFGLVSNPVGHSKGPILHNPAF 260
G+L +GSL V PG PT+ L +Y + I PDTK+ G+++NPV SK P+LHN
Sbjct: 136 GYLTFGSLDATKVSAPGQPTVEELLDIYNIRRIGPDTKVLGVIANPVKQSKSPVLHNTCL 195
Query: 261 RHTRFNGIYVPMLVDDVKEFFRTYSGTDFAGFSVGIPHKEPAVACCDEVHPLAKSIGAVN 320
+ +N +Y+P+L D++ F TYS DF+GFS +P K AV CC + P+AKSIGA++
Sbjct: 196 QSVGYNAVYLPLLADNIARFLSTYSSPDFSGFSCSLPFKVDAVQCCHKHDPVAKSIGAIS 255
Query: 321 TIIRRPIDGKLVGYNTDCESAISAIEDALRERQGINGVASHT---SPIAGKIFVLVGAGG 377
TIIRRP DGKLVGYN D AISAIED GI G S +P+AG++ V+VGAGG
Sbjct: 256 TIIRRP-DGKLVGYNNDYIGAISAIED------GIGGPGSKNAAVTPLAGRLLVVVGAGG 308
Query: 378 AGRALAFGAKSRGARVIIFNRNYERAKALADAVSGEALHFEYLHEFFPEKGMILANASAI 437
AG+A+A+GAK +GAR+++ NR YE+A +LA AV G AL L F PE+GMILANA+++
Sbjct: 309 AGKAIAYGAKEKGARIVVANRTYEKAVSLAAAVGGHALRLAELETFRPEEGMILANATSL 368
Query: 438 GMEPNSDQSPVPKEALKAYELVFDAVYTPRNTRLLREAAEVGATVVSGVEMFIRQALGQF 497
GM PN D +P+PK+AL Y++VFDAVY P+ TRLLREA E G VVSGVEMF+RQALG
Sbjct: 369 GMYPNVDGTPIPKQALSFYDVVFDAVYAPKVTRLLREAEECGVKVVSGVEMFLRQALGPL 428
Query: 498 RLFTGGL-APEDFMRK 512
FT G+ APE MR+
Sbjct: 429 ERFTNGIEAPESLMRE 444
>gi|255070969|ref|XP_002507566.1| dehydroquinate dehydratase [Micromonas sp. RCC299]
gi|226522841|gb|ACO68824.1| dehydroquinate dehydratase [Micromonas sp. RCC299]
Length = 517
Score = 362 bits (930), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 220/507 (43%), Positives = 312/507 (61%), Gaps = 26/507 (5%)
Query: 27 IEQAKVEGADLVELCIDSM-EFSHISEVDKLIQHPTLPAIVSYR--LKSSRKSSDEACKN 83
I++A V GAD+VEL ID + +F +V L+ ++P IV+YR + + DE +
Sbjct: 8 IDEAIVAGADIVELRIDFLRDFIAARDVRVLLDACSVPCIVTYRPTWEGGQYKGDEQHR- 66
Query: 84 TCLQVLRRALDLDVEFVEMDYEVASDPLMS--EIIYSRSNTKIIVSSYLNGGGKPTTEKL 141
L VL A++L +V+ + A + + RS TKII+SS+ N P+ +L
Sbjct: 67 --LSVLWTAVELGAAYVDCELRAAGHFFAAAPNGVRERSTTKIILSSH-NYDDVPSEVEL 123
Query: 142 GDVIACMQATGADVMKLEIAVDSITDLAPVFEMLTHCQVPL----IALAVGSRGLISQLL 197
++ A GAD++K+ V IT +A + +L + I L +G G +S+LL
Sbjct: 124 DEIHAQCVVAGADIVKIAAMVKDITQIARLENLLARAKSATGHKTIVLGMGEAGQVSRLL 183
Query: 198 GPKFGGFLVYGSL--GGKSVPGLPTLVSLKQVYQLEHINPDTKIFGLVSNPVGHSKGPIL 255
KFG FL +G+L G +S PG PTL L+ +Y+L+ + +TK+ G++ NP+ SK P+L
Sbjct: 184 AAKFGSFLTFGALRSGAESAPGQPTLSQLRDIYRLQKQSTNTKVMGVIGNPISQSKSPVL 243
Query: 256 HNPAFRHTRFNGIYVPMLVDDVKEFFRT--YSGTDFAGFSVGIPHKEPAVACCDEVHPLA 313
HN + + YVP+LV D+++F T + F GFSV IPHKE AV CC+E+ P+A
Sbjct: 244 HNISLEAAGLDACYVPLLVSDIRKFLSTPLFVSDSFTGFSVTIPHKESAVMCCEELDPVA 303
Query: 314 KSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALRERQGINGVASHTSPI-AGKIFVL 372
K IGAVNT++R P +GK GYNTD +A+ AIE A ++G + I GK V+
Sbjct: 304 KKIGAVNTLVRLP-NGKFKGYNTDYSAAVRAIERAYTSH--LDGDMRDSETILRGKTIVV 360
Query: 373 VGAGGAGRALAFGAKSRGA-RVIIFNRNYERAKALADAVSGEALHFEYLHEFFPEKGMIL 431
VGAGGAGR+LAFGA +GA ++II NR++ERAKALA A GEA+ + L + KG +L
Sbjct: 361 VGAGGAGRSLAFGAAFKGAGKIIIANRSFERAKALAAACGGEAVALDELRD-GALKGDVL 419
Query: 432 ANASAIGMEPNS-DQSPVPKEALKA--YELVFDAVYTPRNTRLLREAAEVGATVVSGVEM 488
AN +++GM P+S D++PVPKEAL+A +++VFDAVY P TRLLREA E G T SG++M
Sbjct: 420 ANTTSLGMYPDSVDETPVPKEALQAAGFKVVFDAVYNPLETRLLREAKECGCTQASGLDM 479
Query: 489 FIRQALGQFRLFTGGLAPEDFMRKLVL 515
F+ QA QF LFTG A E MRK VL
Sbjct: 480 FVGQAAQQFELFTGKKAAESLMRKAVL 506
>gi|115436644|ref|NP_001043080.1| Os01g0375500 [Oryza sativa Japonica Group]
gi|113532611|dbj|BAF04994.1| Os01g0375500 [Oryza sativa Japonica Group]
gi|222618473|gb|EEE54605.1| hypothetical protein OsJ_01836 [Oryza sativa Japonica Group]
Length = 321
Score = 328 bits (842), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 175/323 (54%), Positives = 229/323 (70%), Gaps = 12/323 (3%)
Query: 187 VGSRGLISQLLGPKFGGFLVYGSLGGKSV--PGLPTLVSLKQVYQLEHINPDTKIFGLVS 244
+G +GL+S++L PKFGG+L +GSL V PG PT+ L +Y + I PDTK+ G+++
Sbjct: 1 MGEKGLMSRVLSPKFGGYLTFGSLDATKVSAPGQPTVEELIDIYDIRRIGPDTKVLGVIA 60
Query: 245 NPVGHSKGPILHNPAFRHTRFNGIYVPMLVDDVKEFFRTYSGTDFAGFSVGIPHKEPAVA 304
NPV SK P+LHN + +N +Y+P+L D++ F TYS DF+GFS +P K AV
Sbjct: 61 NPVKQSKSPVLHNTCLQSVGYNAVYLPLLADNIARFLSTYSSPDFSGFSCSLPFKVDAVQ 120
Query: 305 CCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALRERQGINGVASHT-- 362
CC E P+AKSIGA++TIIRRP DGKL+GYN D AI AIED GI G S
Sbjct: 121 CCHEHDPVAKSIGAISTIIRRP-DGKLLGYNNDYIGAICAIED------GIGGPGSKNAA 173
Query: 363 -SPIAGKIFVLVGAGGAGRALAFGAKSRGARVIIFNRNYERAKALADAVSGEALHFEYLH 421
+P+AG++ V+VGAGGAG+A+A+GAK +GAR+++ NR YE+A +LA AV G AL L
Sbjct: 174 VTPLAGRLLVVVGAGGAGKAIAYGAKEKGARIVVANRTYEKAVSLAAAVGGHALRLAELE 233
Query: 422 EFFPEKGMILANASAIGMEPNSDQSPVPKEALKAYELVFDAVYTPRNTRLLREAAEVGAT 481
F PE+GMILANA+++GM PN D +P+PK+AL Y++VFDAVY P+ TRLLREA E G
Sbjct: 234 TFRPEEGMILANATSLGMYPNVDGTPIPKQALSFYDVVFDAVYAPKVTRLLREAEECGVK 293
Query: 482 VVSGVEMFIRQALGQFRLFTGGL 504
VVSGVEMF+RQALGQF FT G+
Sbjct: 294 VVSGVEMFLRQALGQFERFTNGI 316
>gi|302842835|ref|XP_002952960.1| hypothetical protein VOLCADRAFT_82062 [Volvox carteri f.
nagariensis]
gi|300261671|gb|EFJ45882.1| hypothetical protein VOLCADRAFT_82062 [Volvox carteri f.
nagariensis]
Length = 564
Score = 325 bits (832), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 209/527 (39%), Positives = 310/527 (58%), Gaps = 22/527 (4%)
Query: 11 VCTQLECETTEEMQASIEQAKVEGADLVELCIDSM-EFSHISEVDKLIQHPTLPAIVSYR 69
+CT + +E A I++A G D++EL +D + +F + ++ LP IV+YR
Sbjct: 24 ICTSVTATKVDEFIAEIQEAAASGVDIIELRLDFLTDFDPEQHLQRITSSCPLPYIVTYR 83
Query: 70 --LKSSRKSSDEACKNTCLQV--LRRALDLDVEFVEMDYEVASDPLMSEIIYSRSNTKII 125
+ + E + L++ L A +DVEF Y A + S+ +TK+I
Sbjct: 84 PVWEGGKYDGPEPERLAVLKMAALMGAPYVDVEFKASPYFFAGETGWSQGRAVPLSTKVI 143
Query: 126 VSSYLNGGGKPTTEKLGDVIACMQATGADVMKLEIAVDSITDLAPVFEMLTHCQVPLIAL 185
+S Y + P L + + M+A GAD++KL + ITD A + ++L P+IAL
Sbjct: 144 LS-YHDFQQTPEPAVLDRLASAMRAAGADIVKLAAMANDITDAARMLDLLRKKDGPMIAL 202
Query: 186 AVGSRGLISQLLGPKFGGFLVYGSLGGK--SVPGLPTLVSLKQVYQLEHINPDTKIFGLV 243
++G +G I +LL K+GG+L + ++ + S PG P + L ++ P+TK++G++
Sbjct: 203 SMGEKGQIVRLLAAKYGGYLTFAAMSPERASAPGQPDIGKLAGLFGYRRQGPETKVYGII 262
Query: 244 SNPVGHSKGPILHNPAFRHTRFNGIYVPMLVDDVKEFFRTYSG-TDFAGFSVGIPHKEPA 302
NPV HSK P++HN AF+H F+G+YVP+LVDD++ F + DFAGFSV IPHKE A
Sbjct: 263 GNPVSHSKSPLIHNTAFQHVGFDGVYVPLLVDDLERFLTAFKDHEDFAGFSVTIPHKEAA 322
Query: 303 VACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALRERQGING----- 357
+ EV P+A+ IGAVNT++R+P DG G+NTD +AISAIE + G
Sbjct: 323 LRLATEVDPVARQIGAVNTLVRQP-DGSFKGFNTDWLAAISAIEHGVAGEPGRAAAGAVE 381
Query: 358 ---VASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGARVIIFNRNYERAKALADAVSGEA 414
VA SP+ GK V++GAGGAGRALAFGA ++GARV+I NR+ E+A LA A+ A
Sbjct: 382 EAPVAGGKSPLQGKTVVVIGAGGAGRALAFGAATKGARVVIANRSREKADLLAAALGSSA 441
Query: 415 LHFEYLHEFFPEK--GMILANASAIGMEPNSDQSPVPKEALKAYELVFDAVYTPRNTRLL 472
+ + + G +LAN++++GM P+ ++SPV E Y++VFDAVY P TRLL
Sbjct: 442 TSCSW-EDLVSGRVTGDVLANSTSLGMTPHVEESPVGPEVAAKYKVVFDAVYNPLWTRLL 500
Query: 473 REAAEVGATVVSGVEMFIRQALGQFRLFTGGL-APEDFMRKLVLEQF 518
++A GA V G++MF+ QAL QFRLFTGGL P M K V++
Sbjct: 501 QDARAGGAVPVDGLQMFVGQALEQFRLFTGGLEPPAALMEKTVMDNL 547
>gi|397911050|gb|AFO68801.1| shikimate dehydrogenase, partial [Gunnera manicata]
Length = 377
Score = 323 bits (827), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 187/390 (47%), Positives = 258/390 (66%), Gaps = 17/390 (4%)
Query: 11 VCTQLECETTEEMQASIEQAKVEGADLVELCIDSME-FSHISEVDKLIQHPTLPAIVSYR 69
+C L E+ +EM + +AK G DLVE+ +D ++ F+ +++ LI+ LP I ++R
Sbjct: 2 ICVPLTAESVDEMLIGMRKAKESGVDLVEVRLDFLKSFNPPQDLEFLIKECPLPTIFTFR 61
Query: 70 LKSSRKSSDEACKNTCLQVLRRALDLDVEFVEMDYEVASDPLMSEIIYSRSNTKIIVSSY 129
K D +N L LR A++L ++++++ +VA + S K+IVSS+
Sbjct: 62 PKWEGGQYDGE-ENKRLDALRLAMELGADYIDVELQVAREFNNSISAKKPEKFKVIVSSH 120
Query: 130 LNGGGKPTTEKLGDVIACMQATGADVMKLEIAVDSITDLAPVFEMLTHCQVPLIALAVGS 189
N P+ E LG+++A +QATGAD++K+ ITD+A +F++ H QVP+I L +G
Sbjct: 121 -NYENTPSVEDLGNLVAKIQATGADIVKIATTALDITDVARIFQITVHSQVPIIGLVMGE 179
Query: 190 RGLISQLLGPKFGGFLVYGSL--GGKSVPGLPTLVSLKQVYQLEHINPDTKIFGLVSNPV 247
RGLIS+LL PKFGG+L + +L G S PG PT+ L VY I PDTK+FG++ PV
Sbjct: 180 RGLISRLLCPKFGGYLTFATLEAGKVSAPGQPTINDLLNVYNFRLIGPDTKVFGIIGKPV 239
Query: 248 GHSKGPILHNPAFRHTRFNGIYVPMLVDDVKEFFRTYSGTDFAGFSVGIPHKEPAVACCD 307
GHSK P+L+N AF+ FNG+YV +LVDD+ +F +TYS TDF GFSV IPHKE AV CC+
Sbjct: 240 GHSKSPLLYNSAFKSIGFNGVYVHLLVDDIAKFLQTYSSTDFVGFSVTIPHKENAVKCCN 299
Query: 308 EVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALRERQGINGVASHTSPIAG 367
EV P+AKSI AVN II+R DGKL GYNTD AISAIED LR SP+AG
Sbjct: 300 EVDPVAKSIEAVNCIIKRQSDGKLFGYNTDYVGAISAIEDGLR------------SPLAG 347
Query: 368 KIFVLVGAGGAGRALAFGAKSRGARVIIFN 397
K+FV++GAGGAG+ALA+GAK++GARV+I N
Sbjct: 348 KLFVVIGAGGAGKALAYGAKAKGARVVIAN 377
>gi|145352721|ref|XP_001420686.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144580921|gb|ABO98979.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 526
Score = 320 bits (819), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 211/533 (39%), Positives = 309/533 (57%), Gaps = 30/533 (5%)
Query: 1 MEVAAKNSLLVCTQLECETTEEMQASIEQAKVEGADLVELCIDSMEFSHI-----SEVDK 55
M V A+ + + T + E ++ A +GAD+VEL +D + ++
Sbjct: 1 MRVRARAACKLTTSVIAPNLELALRDVDDAVRKGADVVELRVDFLRDDAARGTLGDAIEA 60
Query: 56 LIQHPTLPAIVSYR--LKSSRKSSDEACKNTCLQVLRRALD-----LDVEFVEMDYEVAS 108
LI+ +P IV+ R + + DE+ + L+ L RA + +D E + + A+
Sbjct: 61 LIKASPVPVIVTNRPTWEGGQDDGDESAR---LEALWRAHECGAAYVDCEALAAERFFAA 117
Query: 109 DPLMSEIIYSRSNTKIIVSSYLNGGGKPTTEKLGDVIACMQATGADVMKLEIAVDSITDL 168
P + + TKII+SS+ N P E L ++ A GAD++K+ +++ D+
Sbjct: 118 KPATATL--RNGKTKIILSSH-NYDETPNDEILAEIHAKCVRLGADIVKMASVCNAVEDV 174
Query: 169 APVFEMLTHC--QVPLIALAVGSRGLISQLLGPKFGGFLVYGSL--GGKSVPGLPTLVSL 224
A + ++L ++ I L + G +S+LL KFG FL +G++ G +S PG P L L
Sbjct: 175 ARLEKLLRTKGREIETIVLGMSEHGQVSRLLAAKFGSFLTFGAIRRGEESAPGQPLLEEL 234
Query: 225 KQVYQLEHINPDTKIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLVDDVKEFFRT- 283
+ +Y++ TK+ G++ NP+GHSK P LHNP + YVP+LV D+K F +
Sbjct: 235 RDLYRVPTQTAATKVMGVIGNPIGHSKSPALHNPCLAAAGVDACYVPLLVKDIKTFLASP 294
Query: 284 -YSGTDFAGFSVGIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAI 342
+ DF GFSV IPHKE A+ CC EV P+AK IGAVNT++R+P DG L GYNTD +AI
Sbjct: 295 LFGSKDFVGFSVTIPHKEDALECCAEVDPVAKQIGAVNTLVRQP-DGSLKGYNTDYVAAI 353
Query: 343 SAIEDALRERQGINGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGARVIIFNRNYER 402
AIE+A+ ++ G+ S +AGK V++GAGGAG+ALAFGAK +GA V+I NR+ ER
Sbjct: 354 EAIENAMEKKTGVAAAKS----LAGKTVVVIGAGGAGKALAFGAKFKGANVVIANRSVER 409
Query: 403 AKALADAVSGEALHFEYLHEFFPEKGMILANASAIGMEPNSDQSPVPKEALKAYELVFDA 462
A+ALADA G A+ E L G +LAN++++GM+PN + +P P L + +VFDA
Sbjct: 410 AQALADACGGVAVSLEDLASG-SVVGDVLANSTSVGMQPNVEDTPTPASVLGGFSVVFDA 468
Query: 463 VYTPRNTRLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRKLVL 515
VYTP TRLLREA G + SG++MF+ QA QF LFTG A + MR VL
Sbjct: 469 VYTPLETRLLREAKASGCEIASGLDMFVGQAARQFELFTGKEAEVELMRDAVL 521
>gi|192758420|gb|ACF05190.1| 3-dehydroquinate dehydratase/shikimate 5-dehydrogenase [Spirogyra
varians]
Length = 520
Score = 318 bits (815), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 210/535 (39%), Positives = 316/535 (59%), Gaps = 39/535 (7%)
Query: 5 AKNSLLVCTQLECETTEEMQASIEQAKVEGADLVELCIDSMEFSHISEVDKLIQHPTLPA 64
A N +VC +L + EE+++ I ++K EGAD VE+ +D + + ++ LI + +
Sbjct: 2 APNPCIVCAELTGKNVEEIKSQICRSKSEGADAVEIRLDLIHGFELDQLSSLIPSDII-S 60
Query: 65 IVSYRLKSSRKSSDEACKNTCLQVLRRALDLDVEFVEMDYEVASDPLMSEIIYSR----S 120
+VSYR S E ++ L L +A++L +FVE+DYE+A E +S+ +
Sbjct: 61 VVSYR-------SKEVSEDLKLAALHKAVELGSDFVEVDYELA------EKFFSKPLGGA 107
Query: 121 NTKIIVSSYLNGGGKPTTEKLGDVIACMQATGADVMKLEIAVDSITDLAPVFEMLTHCQV 180
+KIIV+S+ N P ++L + A ++ T AD++K+ A + I+D A +F+ L +
Sbjct: 108 KSKIIVASF-NYESTPPVDELIALAAKLKETKADIVKIITAANDISDTAKIFKFLDTTKT 166
Query: 181 PLIALAVGSRGLISQLLGPKFGGFLVYGSLGGKS--VPGLPTLVSLKQVYQLEHINPDTK 238
P I+ A+ +RG IS+LL PKF FL Y L KS LPT+ VYQ++ + +K
Sbjct: 167 PTISFALAARGEISRLLAPKFNSFLTYAYLDDKSGSAQELPTVYDAVHVYQIKRLTRQSK 226
Query: 239 IFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLVDDVKEFFRTYSGTDF-AGFSVGIP 297
+FG+V NP+ S+G +L+N F+GIY+P LVDDV+ FF+T++ D AG SV P
Sbjct: 227 VFGVVGNPISQSRGYLLYNAGMIAKNFDGIYLPFLVDDVRLFFKTFNMPDLIAGTSVTAP 286
Query: 298 HKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALRERQGING 357
H++ A+ C DEV P AK+IGAV+ I+RRP DG ++GYN D +AI A+E L E G G
Sbjct: 287 HRQIAMDCIDEVDPAAKAIGAVSAILRRP-DGTMIGYNMDWGAAIYAVEQGLLEHSG--G 343
Query: 358 VASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGARVIIFNRNYERAKALADAVSGEALH- 416
A P+ G + VL GAGGAGR LA+G K +G +++ + + +RA+ +A G+
Sbjct: 344 KAEGKGPLEGVLLVLAGAGGAGRGLAYGVKEKGGYLLVADLDLDRAQEVATTFGGDVTSV 403
Query: 417 --------FEYLHEFFP---EKGMILANASAIGMEPNSDQSPVPK-EALKAYELVFDAVY 464
FE + F +K +L +A+ +GM+P+ D++ ALK Y +VFDAVY
Sbjct: 404 KELTAPDAFEKTLKKFCGHLKKAPVLCHATPVGMKPHVDRTIFADVSALKGYSVVFDAVY 463
Query: 465 TPRNTRLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGL-APEDFMRKLVLEQF 518
P TRL REA +G T VSGVEMF+R+A QF LFTGG+ AP R ++L+
Sbjct: 464 NPAETRLQREAKSIGVTTVSGVEMFLREADEQFELFTGGIPAPSQVHRDVLLKNL 518
>gi|308810206|ref|XP_003082412.1| putative dehydroquinate dehydratase (ISS) [Ostreococcus tauri]
gi|116060880|emb|CAL57358.1| putative dehydroquinate dehydratase (ISS) [Ostreococcus tauri]
Length = 809
Score = 315 bits (806), Expect = 5e-83, Method: Compositional matrix adjust.
Identities = 209/510 (40%), Positives = 293/510 (57%), Gaps = 34/510 (6%)
Query: 27 IEQAKVEGADLVELCIDSMEFSHISEVDKLIQHPTLPAIVSYR--LKSSRKSSDEACKNT 84
+E+A GAD+VEL +D +E + L++ PAIV+ R + R DE +
Sbjct: 315 VEEAIELGADVVELRMDFLERRGREATEALLRKCERPAIVTNRPIWEGGRNDGDE---DE 371
Query: 85 CLQVLRRALDLDVEFVEMDYEVASDPLMSEIIYSRS----------NTKIIVSSYLNGGG 134
L L A +L +V+ + L +E ++R+ TKII+SS+ N
Sbjct: 372 RLDSLWEAYELGAAYVDCEL------LAAERFFARAPDSFKSGGNGKTKIILSSH-NYEE 424
Query: 135 KPTTEKLGDVIACMQATGADVMKLEIAVDSITDLAPVFEMLTHCQVP--LIALAVGSRGL 192
P+ +L + A A GAD++K+ I D+ + +L IAL + G
Sbjct: 425 TPSDVELAKIHAACVAAGADIVKIACVCKEIEDVERLERLLRERGGEKETIALGMSEHGQ 484
Query: 193 ISQLLGPKFGGFLVYGSL--GGKSVPGLPTLVSLKQVYQLEHINPDTKIFGLVSNPVGHS 250
+S+LL KFG +L +G++ G +S PG P L L+ +Y++ TK+ G++ NP+GHS
Sbjct: 485 VSRLLAAKFGSYLTFGAIRRGAESAPGQPLLGELRDMYRVPTQTSSTKVMGVIGNPIGHS 544
Query: 251 KGPILHNPAFRHTRFNGIYVPMLVDDVKEFFRT--YSGTDFAGFSVGIPHKEPAVACCDE 308
K P LHNP + YVP+LV D+K+F + + DF GFSV IPHKE A+ C E
Sbjct: 545 KSPALHNPCLAAANVDACYVPLLVKDIKQFLASPLFGSEDFVGFSVTIPHKEAALEACAE 604
Query: 309 VHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALRERQGINGVASHTSPIAGK 368
V P+AK IGAVNT++R+P DG L GYNTD +AI AIE A+ ++ G + + GK
Sbjct: 605 VDPVAKQIGAVNTLVRQP-DGSLKGYNTDYAAAIDAIEVAMEKKTGTPAAKA----LEGK 659
Query: 369 IFVLVGAGGAGRALAFGAKSRGARVIIFNRNYERAKALADAVSGEALHFEYLHEFFPEKG 428
V++GAGGAG+ALAFGAK +GA VII NR+ ERA+ALADA G A+ E L E G
Sbjct: 660 TVVVIGAGGAGKALAFGAKFKGANVIIANRSVERAQALADACGGRAVSLEDLAEGR-ASG 718
Query: 429 MILANASAIGMEPNSDQSPVPKEALKAYELVFDAVYTPRNTRLLREAAEVGATVVSGVEM 488
+LAN +++GM+P +SP P L + +VFDAVYTP +TRLLREA E G + SG++M
Sbjct: 719 DVLANTTSVGMQPYIAESPAPASVLGDFSVVFDAVYTPLDTRLLREAKEAGCEIASGLDM 778
Query: 489 FIRQALGQFRLFTGGLAPEDFMRKLVLEQF 518
F+ QA QF LFTG A MR+ VL
Sbjct: 779 FVGQAARQFELFTGETADISLMREAVLSSM 808
>gi|386813870|ref|ZP_10101094.1| conserved hypothetical protein [planctomycete KSU-1]
gi|386403367|dbj|GAB63975.1| conserved hypothetical protein [planctomycete KSU-1]
Length = 492
Score = 307 bits (786), Expect = 9e-81, Method: Compositional matrix adjust.
Identities = 178/512 (34%), Positives = 289/512 (56%), Gaps = 27/512 (5%)
Query: 10 LVCTQLECETTEEMQASIEQAKVEGADLVELCIDSMEFSHISEVDKLIQHPTLPAIVSYR 69
++C + + E+ I +A E AD+VEL ID ++ ++ +L++ P IV+ R
Sbjct: 1 MICVPIIADNLEDALKDIAEAS-EVADIVELRIDYIKDLNLK---RLLKGCIKPVIVTNR 56
Query: 70 -LKSSRKSSDEACKNTCLQVLRRALDLDVEFVEMDYEVASDPLMSEIIYSRSNTKIIVSS 128
++ K + + + +L+ A++L V++++++++ + + TK IVS
Sbjct: 57 PVREGGKFT--GSEEDRISLLKLAVELQVDYIDVEHDSIQK------VNNTGKTKRIVS- 107
Query: 129 YLNGGGKPTTEKLGDVIACMQATGADVMKLEIAVDSITDLAPVFEMLTHCQVPLIALAVG 188
Y N P + L + ++ +GAD++K+ + ITD ++++L +P I+ +G
Sbjct: 108 YHNFDKTP--DDLTGIFQRLKQSGADIIKIVPYANGITDNVKIYQLLQQVDMPTISFCMG 165
Query: 189 SRGLISQLLGPKFGGFLVYGSL--GGKSVPGLPTLVSLKQVYQLEHINPDTKIFGLVSNP 246
G+IS++L KFG +L + SL G +S PG ++ L Y + + T I+GL+ NP
Sbjct: 166 EYGIISRILYKKFGSYLTFASLQSGKESAPGQVSIHELLNTYHVRRQDKHTSIYGLIGNP 225
Query: 247 VGHSKGPILHNPAFRHTRFNGIYVPMLVDDVKEFFRTYSGTDFAGFSVGIPHKEPAVACC 306
V HS P +HN F+ F+ IYVP VD + F R + G D G+SV IPHKE +
Sbjct: 226 VSHSISPAIHNTLFKEMGFHNIYVPFKVDTIGNFIREFRGLDIKGYSVTIPHKESVMGHL 285
Query: 307 DEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALRERQGINGVASHTSPIA 366
D + +AK IGAVNTI+ R DG+L+G+NTDCE+A+ +ED ++G+A+ +
Sbjct: 286 DGIDQIAKKIGAVNTIVNR--DGRLIGFNTDCEAAVRVLEDI----NNVSGMAAKAGSLQ 339
Query: 367 GKIFVLVGAGGAGRALAFGAKSRGARVIIFNRNYERAKALADAVSGEALHFEYLHEFFPE 426
GK L GAGG RA+AFG K R A++ IFNRNYERA++LA V F L
Sbjct: 340 GKKVTLFGAGGVARAIAFGLKEREAQITIFNRNYERAQSLACEVDCFYRKFSDLPAL--- 396
Query: 427 KGMILANASAIGMEPNSDQSPVPKEALKAYELVFDAVYTPRNTRLLREAAEVGATVVSGV 486
+ I+ NA+++GM P+ ++P+ K LK +VFD VY P TRLLR+A +G V G+
Sbjct: 397 EADIVVNATSVGMFPSVHETPIDKNYLKPNMIVFDTVYNPPETRLLRDAKSLGCRTVGGL 456
Query: 487 EMFIRQALGQFRLFTGGLAPEDFMRKLVLEQF 518
MF+ QA Q++L+TG + + + K+ ++
Sbjct: 457 SMFVHQAAAQYKLWTGQMPSLELIEKIAYKKL 488
>gi|303272087|ref|XP_003055405.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226463379|gb|EEH60657.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 493
Score = 305 bits (781), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 203/500 (40%), Positives = 300/500 (60%), Gaps = 27/500 (5%)
Query: 19 TTEEMQASIEQAKVEGADLVELCIDSMEF--SHISEVDKLIQHPTLPAIVSYR--LKSSR 74
T E I++A GAD+VEL +D + + ++ +++ +P IV+YR + +
Sbjct: 5 TVAEALTEIDEAVAGGADIVELRVDFIPTLDADGKDLTAMLERCPVPCIVTYRPTWEGGQ 64
Query: 75 KSSDEACKNTCLQVLRRALDLDVEFVEMDYEVASDPLMSEI---IYSRSNTKIIVSSYLN 131
+ +E + L L +A++L +V+ + +A++ + I S TKII+SS+ +
Sbjct: 65 YAGEEEPR---LAALWKAVELGAAYVDCEL-LAAERFFAAAPPGIKDASATKIILSSH-D 119
Query: 132 GGGKPTTEKLGDVIACMQATGADVMKLEIAVDSITD---LAPVFEMLTHCQVPLIALAVG 188
P+ ++L ++ A A GADV+K+ V I D L + E + I L +G
Sbjct: 120 YDAVPSYDELAEIRARCVAAGADVVKIAAMVKDIVDVTRLQTLLEDAAGSRQDTIVLGMG 179
Query: 189 SRGLISQLLGPKFGGFLVYGSL--GGKSVPGLPTLVSLKQVYQLEHINPDTKIFGLVSNP 246
G +S+LL KFG FL +G+L G +S PG PTL L+ +Y++ TK+ G++ NP
Sbjct: 180 EAGQVSRLLAAKFGSFLTFGALRAGAESAPGQPTLRQLRDLYRVPTQTRATKVMGVIGNP 239
Query: 247 VGHSKGPILHNPAFRHTRFNGIYVPMLVDDVKEFFR--TYSGTDFAGFSVGIPHKEPAVA 304
+ SK P LHNP+ + YVP+LV+D++ F + T+ G D+ GFSV IPHKE A+
Sbjct: 240 IAQSKSPALHNPSLAAAGVDACYVPLLVNDIEAFLKSATFGGDDYVGFSVTIPHKEAALR 299
Query: 305 CCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALRERQGINGVASHTSP 364
CCDEV P+A IGAVNT+++RP DG GYNTD +AI AIE A+ ++G +
Sbjct: 300 CCDEVDPVAAEIGAVNTLVKRP-DGTFKGYNTDYVAAIDAIEAAMNAKRGT----ASGEV 354
Query: 365 IAGKIFVLVGAGGAGRALAFGAKSRGARVIIFNRNYERAKALADAVSGEALHFEYLHEFF 424
+ GK V+VGAGGAGR LAFGAK +GA VI+ NR+ +RA+ALA A G A+ E L
Sbjct: 355 LRGKTVVVVGAGGAGRGLAFGAKFKGADVIVANRSLDRAQALATACGGVAVTLEALAS-G 413
Query: 425 PEKGMILANASAIGMEPNSDQSPVPKEALKA--YELVFDAVYTPRNTRLLREAAEVGATV 482
KG +LAN +++GM P D++P PK A+ A +++VFDAVY P T+LLR+A EVG +
Sbjct: 414 AVKGDVLANTTSVGMTPKVDETPTPKSAIAAGGFDVVFDAVYNPLETKLLRDAKEVGCEL 473
Query: 483 VSGVEMFIRQALGQFRLFTG 502
SG++MF+ QA QF LFTG
Sbjct: 474 ASGLDMFVGQAALQFELFTG 493
>gi|255542474|ref|XP_002512300.1| 3-dehydroquinate dehydratase, putative [Ricinus communis]
gi|223548261|gb|EEF49752.1| 3-dehydroquinate dehydratase, putative [Ricinus communis]
Length = 368
Score = 300 bits (769), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 154/350 (44%), Positives = 229/350 (65%), Gaps = 9/350 (2%)
Query: 6 KNSLLVCTQLECETTEEMQASIEQAKVEGADLVELCIDSME-FSHISEVDKLIQHPTLPA 64
+NS L+C + ++ + M I +AK GADLVE+ +D +E FS I +++ LI+ LP
Sbjct: 21 RNSTLICAPVMAKSVDGMLVQINKAKELGADLVEIRVDFLENFSPIQDLEILIKQSALPT 80
Query: 65 IVSYRLKSS--RKSSDEACKNTCLQVLRRALDLDVEFVEMDYEVASDPLMSEIIYSRSNT 122
+++YR K DE+ + + LR A++L +F++++ +VA + S
Sbjct: 81 LITYRPKWEVGEYDGDESKRQ---EALRLAIELGSDFIDVELKVAPEFFNSIQGKKPEKV 137
Query: 123 KIIVSSYLNGGGKPTTEKLGDVIACMQATGADVMKLEIAVDSITDLAPVFEMLTHCQVPL 182
KIIVSS+ N P+ E++ +++A +Q+TGAD++K+ ITD A +F++L H QVP+
Sbjct: 138 KIIVSSH-NYENTPSVEEIANLVAKIQSTGADIVKVATTALDITDNARMFQVLVHAQVPM 196
Query: 183 IALAVGSRGLISQLLGPKFGGFLVYGSL--GGKSVPGLPTLVSLKQVYQLEHINPDTKIF 240
I + + RGL+S++L KFGGFL +GS+ G S PG PT+ L +Y L I DTK+
Sbjct: 197 IGIVMAERGLMSRILAAKFGGFLTFGSIEAGVVSAPGQPTITDLLDLYNLRQIGADTKVH 256
Query: 241 GLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLVDDVKEFFRTYSGTDFAGFSVGIPHKE 300
G++ NP+GHSK P L+N AF+ RFNGIY+P+LVD+V + TYS +DF G+S IPHKE
Sbjct: 257 GVIGNPIGHSKSPHLYNSAFKSVRFNGIYLPLLVDNVANYISTYSSSDFVGYSYTIPHKE 316
Query: 301 PAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALR 350
+ CCDEV P+A++IGA++ +IRRP DGKL+GYN D AI AIE+ALR
Sbjct: 317 AGLKCCDEVDPIAQAIGAISCMIRRPSDGKLMGYNVDYLGAIGAIEEALR 366
>gi|159472414|ref|XP_001694346.1| dehydroquinate dehydratase [Chlamydomonas reinhardtii]
gi|158277009|gb|EDP02779.1| dehydroquinate dehydratase [Chlamydomonas reinhardtii]
Length = 554
Score = 295 bits (754), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 212/525 (40%), Positives = 312/525 (59%), Gaps = 32/525 (6%)
Query: 11 VCTQLECETTEEMQASIEQAKVEGADLVELCIDSM-EFSHISEVDKLIQHPTLPAIVSYR 69
+CT + T E A I++A G D++EL +D + +F ++K+I+ LP IV+YR
Sbjct: 37 ICTSVTATTVESFLAEIQEAAASGVDIIELRLDFLTDFDPEQHLEKIIKACPLPYIVTYR 96
Query: 70 LKSSRKSSDEACKNTCLQVLRRALDLDVEFVEMDYEVA----SDPLMSEIIYSRSNTKII 125
E + L VL+ A + +V+++++ + +DP E+ S TK+I
Sbjct: 97 -PVWEGGKYEGPEPERLAVLKMAALMGAPYVDVEFKASPYFFADP--HEVPLS---TKVI 150
Query: 126 VSSYLNGGGKPTTEKLGDVIACMQATGADVMKLEIAVDSITDLAPVFEMLTHCQVPLIAL 185
+S Y + P L + M+ GAD++KL + I D A + ++L + P+IAL
Sbjct: 151 LS-YHDFKQTPDAAVLNKLATAMRQAGADIVKLAAMANDIGDAARMLDLLRNKDGPMIAL 209
Query: 186 AVGSRGLISQLLGPKFGGFLVYGSLGGK--SVPGLPTLVSLKQVYQLEHINPDTKIFGLV 243
++G RG I +LL K+GG L + ++ + S PG P + L ++ + TK+FG++
Sbjct: 210 SMGERGQIVRLLAAKYGGHLTFAAMSPERASAPGQPDIGRLAGLFNYRKQSAATKVFGII 269
Query: 244 SNPVGHSKGPILHNPAFRHTRFNGIYVPMLVDDVKEF---FRTYSGTDFAGFSVGIPHK- 299
NPV SK P++HN AF+H F+G+YVP+LVDD++ F F+ Y DFAGFSV IPHK
Sbjct: 270 GNPVAQSKSPLIHNTAFQHIGFDGVYVPLLVDDLERFLAAFKDYD--DFAGFSVTIPHKV 327
Query: 300 -EPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALRERQGINGV 358
E A+ +V P+A IGAVNT+IR+ DG GYNTD E+AISAIE L G G
Sbjct: 328 REAALRAAKDVDPVAAQIGAVNTLIRQ-ADGSFKGYNTDWEAAISAIERGL---AGNAGT 383
Query: 359 ASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGARVIIFNRNYERAKALADAVSGEALHFE 418
+ SP+ G+ V++GAGGAGRALAFGA +RGARV+I NR+ +RA ALA A++ +
Sbjct: 384 PAAESPLKGRTVVVIGAGGAGRALAFGAAARGARVLIANRSRDRADALAAALAAQYGSAA 443
Query: 419 YLHEFFPE------KGMILANASAIGMEPNSDQSPVPKEALKAYELVFDAVYTPRNTRLL 472
+ + G +LAN++++GM PN+++SPVP +++VFDAVY P TRLL
Sbjct: 444 AAAVSYEDLAGGRVVGDVLANSTSVGMAPNTEESPVPAAVAGQFKVVFDAVYNPLWTRLL 503
Query: 473 REAAEVGATVVSGVEMFIRQALGQFRLFTGGL-APEDFMRKLVLE 516
+A GAT V G++MF+ QAL QFRLFTGG P + M + V E
Sbjct: 504 LDAKAGGATPVDGLQMFVGQALEQFRLFTGGSEPPAELMERTVEE 548
>gi|397911052|gb|AFO68802.1| shikimate dehydrogenase, partial [Gunnera manicata]
Length = 355
Score = 291 bits (746), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 161/372 (43%), Positives = 232/372 (62%), Gaps = 22/372 (5%)
Query: 10 LVCTQLECETTEEMQASIEQAKVEGADLVELCIDSME-FSHISEVDKLIQHPTLPAIVSY 68
L+CT L T ++M + +AK GADLVE+ +D + F+ ++ LI+ LP +V+Y
Sbjct: 1 LLCTPLMGTTVDQMLLEMRKAKDIGADLVEIRLDCLRTFNPGQVLNILIKQCPLPTLVTY 60
Query: 69 R--LKSSRKSSDEACKNTCLQVLRRALDLDVEFVEMDYEVASDPLMSEIIYSRSNTKIIV 126
R + + DE N LR A++L +V+++ EVA+D S KIIV
Sbjct: 61 RPVWEGGQYEGDE---NKRQDALRLAMELGAAYVDIELEVANDFNNSIAAKKPDGFKIIV 117
Query: 127 SSYLNGGGKPTTEKLGDVIACMQATGADVMKLEIAVDSITDLAPVFEMLTHCQVPLIALA 186
SS+ N P+ E +G+++A +QATGAD++K+ ITD A +F++ + Q+P+I +
Sbjct: 118 SSH-NFHNTPSLEGIGNLVARIQATGADIVKIATTALDITDCARIFQITVNSQIPMIGIV 176
Query: 187 VGSRGLISQLLGPKFGGFLVYGSL--GGKSVPGLPTLVSLKQVYQLEHINPDTKIFGLVS 244
+G RGLIS++L PKFGG+L +G+L G S PG PT L ++Y INPDTK++G++
Sbjct: 177 MGERGLISRILSPKFGGYLTFGALEAGAISAPGQPTAKDLVELYNFRLINPDTKVYGIIG 236
Query: 245 NPVGHSKGPILHNPAFRHTRFNGIYVPMLVDDVKEFFRTYSGTDFAGFSVGIPHKEPAVA 304
PVGHSK P+L N +++ N +YV +LVDDV++FF TYS DF GFS IPHKE A+
Sbjct: 237 KPVGHSKSPLLFNESWKSIGLNSVYVHLLVDDVEKFFATYSALDFFGFSCTIPHKEAALK 296
Query: 305 CCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALRERQGINGVASHTSP 364
C E+ P+AK IGA+N I++RP DGK YNTD AI+ IED LR SP
Sbjct: 297 CMAEIDPIAKKIGAINNIVKRP-DGKFKAYNTDYIGAIAGIEDELR------------SP 343
Query: 365 IAGKIFVLVGAG 376
+AGK+FV++GAG
Sbjct: 344 LAGKLFVVLGAG 355
>gi|414877458|tpg|DAA54589.1| TPA: hypothetical protein ZEAMMB73_882303 [Zea mays]
Length = 401
Score = 289 bits (739), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 177/402 (44%), Positives = 255/402 (63%), Gaps = 21/402 (5%)
Query: 10 LVCTQLECETTEEMQASIEQAKVEGADLVELCIDSME-FSHISEVDKLIQHPTLPAIVSY 68
L+C L T EEM A G D+VE+ +D ++ F + L++ LPA+V+Y
Sbjct: 3 LLCVPLVGRTVEEMITDAAAAAATGGDMVEIRLDFIQGFRPREHLPPLLRGCPLPALVTY 62
Query: 69 R--LKSSRKSSDEACKNTCLQVLRRALDLDVEFVEMDYEVASDPLMSEII-YSRSNTKII 125
R + + D+ + + LR A++L V++V+++ +VA D MS I + K+I
Sbjct: 63 RPVWEGGQYEGDDTTR---FETLRLAMELGVDYVDIELKVA-DKFMSFIAGHKPEKCKLI 118
Query: 126 VSSYLNGGGKPTTEKLGDVIACMQATGADVMKLEIAVDSITDLAPVFEMLTHCQVPLIAL 185
VSS+ N P+ E++ +++A +QA GAD++K+ I D++ +F+++ HCQVP+I L
Sbjct: 119 VSSH-NYEYTPSCEEITNLVASIQAVGADIVKVATTAKDIVDVSRMFQVMVHCQVPMIGL 177
Query: 186 AVGSRGLISQLLGPKFGGFLVYGSLGGK--SVPGLPTLVSLKQVYQLEHINPDTKIFGLV 243
+ +GL+S++L PKFGG+L +G L S G PT+ L +Y ++ I PDTKI GL+
Sbjct: 178 VMSEKGLMSRVLAPKFGGYLTFGILNATKTSASGQPTVEDLLDIYNIKCIGPDTKILGLI 237
Query: 244 SNPVGHSKGPILHNPAFRHTRFNGIYVPMLVDDVKEFFRTYSGTDFAGFSVGIPHKEPAV 303
+NPV SK PILHN + +N +Y+P+L D++ F TYS DF+GFS +P K AV
Sbjct: 238 ANPVKQSKSPILHNKCLQSIGYNAVYLPLLGDNLASFLETYSSPDFSGFSCSLPFKVDAV 297
Query: 304 ACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALRERQGINGVASH-- 361
CCDE P+AKSIGA+NTIIRRP DGKLVGYNTD AISAIED GI G S
Sbjct: 298 QCCDEHDPVAKSIGAINTIIRRP-DGKLVGYNTDYIGAISAIED------GIGGPGSKDA 350
Query: 362 -TSPIAGKIFVLVGAGGAGRALAFGAKSRGARVIIFNRNYER 402
SP+AG++ V+VGAGGAG+A+A+GAK +GARV+I NR Y +
Sbjct: 351 VISPLAGRLIVVVGAGGAGKAIAYGAKEKGARVVIANRTYGK 392
>gi|91200495|emb|CAJ73543.1| similar to 3-dehydroquinate dehydratase / shikimate 5-dehydrogenase
[Candidatus Kuenenia stuttgartiensis]
Length = 499
Score = 286 bits (731), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 164/515 (31%), Positives = 285/515 (55%), Gaps = 28/515 (5%)
Query: 6 KNSLLVCTQLECETTEEMQASIEQAKVEGADLVELCIDSMEFSHISEVDKLIQHPTLPAI 65
+N ++C + + +E A + AD VEL ID + H + +++ T P I
Sbjct: 2 QNKPMICVPIVANNNNDAIHDMECAS-KIADAVELRID---YIHDLNLRQILGKCTKPVI 57
Query: 66 VSYRLKSS----RKSSDEACKNTCLQVLRRALDLDVEFVEMDYE-VASDPLMSEIIYSRS 120
V+ R R + +E LQ+L++A+ L ++V+++++ + + +++ S
Sbjct: 58 VTNRPVREGGKFRGTEEER-----LQLLKQAIQLQADYVDIEHDSIRNVKKNGNALFAAS 112
Query: 121 NTKIIVSSYLNGGGKPTTEKLGDVIACMQATGADVMKLEIAVDSITDLAPVFEMLTHCQV 180
TKIIVS + + T E L ++ + +GAD++K+ +SITD ++++L ++
Sbjct: 113 KTKIIVSYH---NFRETPENLSEIYNTLFQSGADIVKIVTHANSITDNIKIYQLLQQSKI 169
Query: 181 PLIALAVGSRGLISQLLGPKFGGFLVYGSL--GGKSVPGLPTLVSLKQVYQLEHINPDTK 238
P+I+ +G G+IS++L FG +L + SL G +S PG + L Y +++ N T
Sbjct: 170 PIISFCMGEYGIISRILYKIFGSYLTFASLQKGKESAPGQINIEELLNRYNIKNQNKHTA 229
Query: 239 IFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLVDDVKEFFRTYSGTDFAGFSVGIPH 298
++GL+ NPV HS P++HN F+ N +YVP VD++ F + + +G+SV IPH
Sbjct: 230 VYGLIGNPVSHSISPVIHNALFKEIGMNCVYVPFKVDEIGRFISEFKKLNISGYSVTIPH 289
Query: 299 KEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALRERQGINGV 358
KE + D+ P+AK IGAVNT++ + + +L+G+NTD E+A++ L E ++G
Sbjct: 290 KESIINYLDDADPIAKKIGAVNTVVNK--NNRLIGFNTDLEAAVT----VLAEVANVSGH 343
Query: 359 ASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGARVIIFNRNYERAKALADAVSGEALHFE 418
+ + K ++GAGG RA+AFG K GA + + +RN+ R ++LA V +
Sbjct: 344 TAADACFKNKHVTIIGAGGVARAIAFGLKMYGADITLVSRNHNRMQSLAGEVGCSFTNKN 403
Query: 419 YLHEFFPEKGMILANASAIGMEPNSDQSPVPKEALKAYELVFDAVYTPRNTRLLREAAEV 478
L + I NA+ +GM P+ +++PV ++ LK +VFD +Y P T+L+++A E+
Sbjct: 404 GLQNLETD---IFVNATPVGMYPSINETPVDRKLLKPNMIVFDTIYNPPETKLIKDAKEI 460
Query: 479 GATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRKL 513
G V G+ MFIRQA QFRL+T P + + +
Sbjct: 461 GCKTVGGMPMFIRQAAAQFRLWTDTEPPLNIIENI 495
>gi|397911048|gb|AFO68800.1| shikimate dehydrogenase, partial [Pachysandra terminalis]
Length = 246
Score = 285 bits (730), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 154/258 (59%), Positives = 190/258 (73%), Gaps = 12/258 (4%)
Query: 254 ILHNPAFRHTRFNGIYVPMLVDDVKEFFRTYSGTDFAGFSVGIPHKEPAVACCDEVHPLA 313
+L+N AF+ F+G+YV +LVDD+ +F RTYS DF GFS IPHKE A+ C DE+ P+A
Sbjct: 1 LLYNQAFKSVGFDGVYVHLLVDDITKFLRTYSSPDFVGFSCTIPHKEAALGCLDEIDPVA 60
Query: 314 KSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALRERQGINGVASHTSPIAGKIFVLV 373
KSIGAVN IIR P DGKL GYNTD AISAIED L+ SP+AGK+FV++
Sbjct: 61 KSIGAVNCIIRSPSDGKLSGYNTDYFGAISAIEDGLQ------------SPLAGKLFVVI 108
Query: 374 GAGGAGRALAFGAKSRGARVIIFNRNYERAKALADAVSGEALHFEYLHEFFPEKGMILAN 433
GAGGAG+ALA+GAK +GAR++I NR YERA+ LA+ V AL L F PE GMILAN
Sbjct: 109 GAGGAGKALAYGAKEKGARIVIANRTYERARELAEIVGARALSLAELDTFHPEDGMILAN 168
Query: 434 ASAIGMEPNSDQSPVPKEALKAYELVFDAVYTPRNTRLLREAAEVGATVVSGVEMFIRQA 493
+++IGM+P D++P+PK+AL Y LVFDAVYTP+ TRLLREA E GATVVSG+EMFIRQA
Sbjct: 169 STSIGMQPKVDETPIPKKALSNYSLVFDAVYTPKLTRLLREAEECGATVVSGLEMFIRQA 228
Query: 494 LGQFRLFTGGLAPEDFMR 511
Q+ FTG AP++ R
Sbjct: 229 YEQYERFTGLPAPKELFR 246
>gi|7488788|pir||S48698 3-dehydroquinate dehydratase (EC 4.2.1.10) / shikimate
5-dehydrogenase (EC 1.1.1.25) precursor - garden pea
(fragment)
Length = 325
Score = 284 bits (726), Expect = 8e-74, Method: Compositional matrix adjust.
Identities = 150/327 (45%), Positives = 215/327 (65%), Gaps = 10/327 (3%)
Query: 6 KNSLLVCTQLECETTEEMQASIEQAKVEGADLVELCIDSME-FSHISEVDKLIQ-HPTLP 63
KN+ L+C + ET E+M I++AK+ GADLVE+ +DS+ F+ +++ IQ H +LP
Sbjct: 2 KNATLICVPIMGETVEKMVVDIQKAKLNGADLVEIRLDSLSTFNPHQDLNTFIQQHHSLP 61
Query: 64 AIVSYR--LKSSRKSSDEACKNTCLQVLRRALDLDVEFVEMDYEVASDPLMSEIIYSRSN 121
+ +YR + + DE N L LR A++L ++V+++ +VA + S +
Sbjct: 62 FLFTYRPIWEGGKYDGDE---NRRLDALRLAVELGADYVDIELKVAHEFYDSIRGKMFNK 118
Query: 122 TKIIVSSYLNGGGKPTTEKLGDVIACMQATGADVMKLEIAVDSITDLAPVFEMLTHCQVP 181
TK+IVSS+ N P+ E LGD++A +QATGAD++K+ ITD+A +F++L H QVP
Sbjct: 119 TKVIVSSH-NYQYTPSVEDLGDLVARIQATGADIVKIATTAVEITDVARMFQILVHSQVP 177
Query: 182 LIALAVGSRGLISQLLGPKFGGFLVYGSL--GGKSVPGLPTLVSLKQVYQLEHINPDTKI 239
I L +G RGL+S++L KFGG+L +G+L G S PG PT+ L +Y + P+TK+
Sbjct: 178 FIGLVMGDRGLVSRVLCAKFGGYLTFGTLESGVVSAPGQPTIKDLLHLYNFRQLGPETKV 237
Query: 240 FGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLVDDVKEFFRTYSGTDFAGFSVGIPHK 299
+G++ PV HSK PIL N AF+ FNG++V +LVDD+ F RTYS TDF GFSV IPHK
Sbjct: 238 YGIIGKPVSHSKSPILFNEAFKTVGFNGVFVFLLVDDLANFLRTYSSTDFVGFSVTIPHK 297
Query: 300 EPAVACCDEVHPLAKSIGAVNTIIRRP 326
E A+ CCDEV P+AKSIGAVN I+R P
Sbjct: 298 ESALKCCDEVDPVAKSIGAVNXIVRXP 324
>gi|452825796|gb|EME32791.1| bifunctional 3-hydroquinate dehydratase/shikimate 5-dehydrogenase
[Galdieria sulphuraria]
Length = 521
Score = 283 bits (723), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 187/528 (35%), Positives = 301/528 (57%), Gaps = 35/528 (6%)
Query: 10 LVCTQLECETTEEMQASIEQAKVEGADLVELCIDSMEFSHISEVDKLIQHPTLPAIVSYR 69
L+C + + +E I++A+ GADLVEL +D ++ + E + L++H +P I + R
Sbjct: 5 LLCVPITAQYVKEAFEQIKEAQRLGADLVELRLDLLDSTE--EWEDLVKHCFVPKIATCR 62
Query: 70 --LKSSRKSSDEACKNTCLQVLRRALDLDVEFVEMDYEVAS---DPLMSEIIYSRSNTKI 124
+ + E+ + L +L A L E+V+++ E + P S +TK+
Sbjct: 63 PHWEGGNYNGSESRR---LSILSEACKLGCEYVDVELEAITRFEKP-------SNCHTKL 112
Query: 125 IVSSYLNGGGKP-TTEKLGDVIACMQATGADVMKLEIAVDSITDLAPVFEMLTHCQVPLI 183
I+S +L +P + ++L + + M + ADV+K+ +D+I +F + +VP I
Sbjct: 113 ILSRHL--WNRPFSHQELANTYSSMLSNQADVIKVACKIDNIEQCEILFHFIAASKVPCI 170
Query: 184 ALAVGSRGLISQLLGPKFGGFLVYGSL--GGKSVPGLPTLVSLKQVYQLEHINPDTKIFG 241
AL +G G IS++L ++G FL + SL G +S PG L Q+Y+L+ ++ TK++G
Sbjct: 171 ALGMGEAGQISRILAGRYGAFLTFASLSKGKESAPGQIELNDCIQMYRLKSLSSSTKLYG 230
Query: 242 LVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLVDDVKEFFRTYSGTDFAGFSVGIPHKEP 301
+V NPV HS P +HN AF + +Y P+ V+D ++ + F G SV IPHKE
Sbjct: 231 VVGNPVAHSMSPAIHNLAFASLSLDCVYCPLAVEDFGSCWKMLNEMGFMGLSVTIPHKET 290
Query: 302 AVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALRERQGINGVASH 361
A DE+ LA IGA+NT+++ ++ GYNTDC +A+SAIED L ++ + ++
Sbjct: 291 AKRYVDELDGLALKIGAINTMVK--LERGWKGYNTDCLAAVSAIEDGLIAQRSSSELSHR 348
Query: 362 TSPIAGK-----IFVLVGAGGAGRALAFGAKSRGARVIIFNRNYERAKALADAVSGEALH 416
T+ + + + +++GAGGA RA+AFG R + + NRNY+R K LA + EA+
Sbjct: 349 TNSFSTQAGAKPLVLILGAGGAARAIAFGLLERSYNIYVVNRNYDRCKKLAAELGIEAIP 408
Query: 417 FEYLHEFFPEKG---MILANASAIGMEPNSDQSPVPKEALKAYE---LVFDAVYTPRNTR 470
+E L F E ++ +++IGM PN +P+ + L++ LVFD VY P TR
Sbjct: 409 WEGLRRFLLEHKDSIDVIIQSTSIGMHPNVHDTPLSFDDLQSLSKKPLVFDVVYNPVETR 468
Query: 471 LLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRKLVLEQF 518
LREA EVG VVSG+EMF+RQA+ QF L+TG AP + MR++VL++
Sbjct: 469 FLREAREVGCYVVSGLEMFVRQAVYQFELWTGSKAPVEQMRQVVLKRL 516
>gi|32474293|ref|NP_867287.1| 3-dehydroquinate dehydratase / shikimate 5-dehydrogenase precursor
[Rhodopirellula baltica SH 1]
gi|417304128|ref|ZP_12091163.1| shikimate 5-dehydrogenase [Rhodopirellula baltica WH47]
gi|32444831|emb|CAD74833.1| 3-dehydroquinate dehydratase / shikimate 5-dehydrogenase precursor
[Rhodopirellula baltica SH 1]
gi|327539589|gb|EGF26198.1| shikimate 5-dehydrogenase [Rhodopirellula baltica WH47]
Length = 496
Score = 264 bits (675), Expect = 8e-68, Method: Compositional matrix adjust.
Identities = 164/511 (32%), Positives = 267/511 (52%), Gaps = 27/511 (5%)
Query: 10 LVCTQLECETTEEMQASIEQAKVEGADLVELCIDSMEFSHISEVDKLIQHPTLPAIVSYR 69
++C L + M A + +GA LVEL +D + S ++ +L+ P + + R
Sbjct: 1 MICVSLGRARHKRMIAEHQFLVEQGAQLVELRLDYI--SRAVDLKRLLNDRPGPVVATVR 58
Query: 70 LKSSRKSSDEACKNTCLQVLRRALDLDVEFVEMDYEVASDPLMSEIIYSRSNTKIIVSSY 129
K + + ++ L +LR + E+V+++ +VA+ I NTK I+S Y
Sbjct: 59 RKEDGGRWERSEQDR-LMLLRSVIAAGAEYVDIEADVAAQ------IPRYGNTKRIIS-Y 110
Query: 130 LNGGGKPTTEKLGDVIACMQATGADVMKLEIAVDSITDLAPVFEMLTHCQVPLIALAVGS 189
+ G P E L ++ M A AD++K+ +S +D + + + ++P I + +G
Sbjct: 111 HDFSGTP--ENLDELHEAMAAEDADIVKIACMANSFSDNIRMINLCKNAKIPTIGICMGE 168
Query: 190 RGLISQLLGPKFGGFLVYGSLGG--KSVPGLPTLVSLKQVYQLEHINPDTKIFGLVSNPV 247
G+++++L + G Y + K PG + VY E I DT +FG++++PV
Sbjct: 169 IGMLTRILANRVGSPFTYATFSSDKKLAPGQLNWKEMNSVYHYETIKEDTALFGVIADPV 228
Query: 248 GHSKGPILHNPAFRHTRFNGIYVPMLV--DDVKEFFRTYSGTDFAGFSVGIPHKEPAVAC 305
HS P++HN AF N Y+P+ V DD+ F RT G S+ IPHKE A+
Sbjct: 229 AHSHSPLIHNAAFVDAGLNARYLPLRVPKDDLPSFMRTCKELGIQGISITIPHKESALQY 288
Query: 306 CDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALRERQGINGVASHTSPI 365
C + IGA+NT+I D +GYNTD +A+ IE++ + +G + +
Sbjct: 289 CTQAESSCTGIGAINTMIFNGDD--RLGYNTDYRAAMDCIEESFKIERGTE------NSL 340
Query: 366 AGKIFVLVGAGGAGRALAFGAKSRGARVIIFNRNYERAKALADAVSGEALHFEYLHEFFP 425
GK +++GAGG RA+A+G + R V I +R ERA+ LA + + +E HE
Sbjct: 341 QGKTALVLGAGGVSRAIAWGLRQRKCDVTISSRTRERAEMLAADIGCRVIDWEERHE--- 397
Query: 426 EKGMILANASAIGMEPNSDQSPVPKEALKAYELVFDAVYTPRNTRLLREAAEVGATVVSG 485
K +L N + IGM P+ D +P + AL + +VFD VY P NT L+++A + + V++G
Sbjct: 398 AKVQLLINGTPIGMHPDVDNTPFNQSALNQFMVVFDTVYNPENTLLIKQATQKQSRVITG 457
Query: 486 VEMFIRQALGQFRLFTGGLAPEDFMRKLVLE 516
V+MF+RQA QF+LFTG A + MRK + E
Sbjct: 458 VDMFVRQAAYQFKLFTGQEASIELMRKKIKE 488
>gi|440716706|ref|ZP_20897210.1| protein containing Quinate/shikimate 5-dehydrogenase domain protein
[Rhodopirellula baltica SWK14]
gi|436438203|gb|ELP31763.1| protein containing Quinate/shikimate 5-dehydrogenase domain protein
[Rhodopirellula baltica SWK14]
Length = 496
Score = 264 bits (674), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 164/511 (32%), Positives = 267/511 (52%), Gaps = 27/511 (5%)
Query: 10 LVCTQLECETTEEMQASIEQAKVEGADLVELCIDSMEFSHISEVDKLIQHPTLPAIVSYR 69
++C L + M A + +GA LVEL +D + S ++ +L+ P + + R
Sbjct: 1 MICVSLGRARHKRMIAEHQFLVEQGAQLVELRLDYI--SRAVDLKRLLNDRPGPVVATVR 58
Query: 70 LKSSRKSSDEACKNTCLQVLRRALDLDVEFVEMDYEVASDPLMSEIIYSRSNTKIIVSSY 129
K + + ++ L +LR + E+V+++ +VA+ I NTK I+S Y
Sbjct: 59 RKEDGGRWERSEQDR-LMLLRSVIAAGAEYVDIEADVAAQ------IPRYGNTKRIIS-Y 110
Query: 130 LNGGGKPTTEKLGDVIACMQATGADVMKLEIAVDSITDLAPVFEMLTHCQVPLIALAVGS 189
+ G P E L ++ M A AD++K+ +S +D + + + ++P I + +G
Sbjct: 111 HDFSGTP--ENLDELHEAMAAEDADIVKIACMANSFSDNIRMINLCKNAKIPTIGICMGE 168
Query: 190 RGLISQLLGPKFGGFLVYGSLGG--KSVPGLPTLVSLKQVYQLEHINPDTKIFGLVSNPV 247
G+++++L + G Y + K PG + VY E I DT +FG++++PV
Sbjct: 169 IGMLTRILANRVGSPFTYATFSSDKKLAPGQLNWKEMNSVYHYETIKEDTALFGVIADPV 228
Query: 248 GHSKGPILHNPAFRHTRFNGIYVPMLV--DDVKEFFRTYSGTDFAGFSVGIPHKEPAVAC 305
HS P++HN AF N Y+P+ V DD+ F RT G S+ IPHKE A+
Sbjct: 229 AHSHSPLIHNAAFVDAGLNARYLPLRVPKDDLPSFMRTCKELGIQGISITIPHKESALQY 288
Query: 306 CDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALRERQGINGVASHTSPI 365
C + IGA+NT+I D +GYNTD +A+ IE++ + +G + +
Sbjct: 289 CTQAESSCTGIGAINTMIFNGDD--RLGYNTDYRAAMDCIEESFKIERGTE------NSL 340
Query: 366 AGKIFVLVGAGGAGRALAFGAKSRGARVIIFNRNYERAKALADAVSGEALHFEYLHEFFP 425
GK +++GAGG RA+A+G + R V I +R ERA+ LA + + +E HE
Sbjct: 341 QGKTALVLGAGGVSRAIAWGLRQRKCDVTISSRTRERAEILAADIGCRVIDWEERHE--- 397
Query: 426 EKGMILANASAIGMEPNSDQSPVPKEALKAYELVFDAVYTPRNTRLLREAAEVGATVVSG 485
K +L N + IGM P+ D +P + AL + +VFD VY P NT L+++A + + V++G
Sbjct: 398 AKVQLLINGTPIGMHPDVDNTPFNQSALNQFMVVFDTVYNPENTLLIKQATQKQSRVITG 457
Query: 486 VEMFIRQALGQFRLFTGGLAPEDFMRKLVLE 516
V+MF+RQA QF+LFTG A + MRK + E
Sbjct: 458 VDMFVRQAAYQFKLFTGQEASIELMRKKIKE 488
>gi|421613663|ref|ZP_16054736.1| protein containing Quinate/shikimate 5-dehydrogenase
[Rhodopirellula baltica SH28]
gi|408495622|gb|EKK00208.1| protein containing Quinate/shikimate 5-dehydrogenase
[Rhodopirellula baltica SH28]
Length = 496
Score = 263 bits (673), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 164/511 (32%), Positives = 266/511 (52%), Gaps = 27/511 (5%)
Query: 10 LVCTQLECETTEEMQASIEQAKVEGADLVELCIDSMEFSHISEVDKLIQHPTLPAIVSYR 69
++C L + M A + +GA LVEL +D + S ++ +L+ P + + R
Sbjct: 1 MICVSLGRARHKRMIAEHQFLVEQGAQLVELRLDYI--SRAVDLKRLLNDRPGPVVATVR 58
Query: 70 LKSSRKSSDEACKNTCLQVLRRALDLDVEFVEMDYEVASDPLMSEIIYSRSNTKIIVSSY 129
K + + ++ L +LR + E+V+++ +VA+ I NTK I+S Y
Sbjct: 59 RKEDGGRWERSEQDR-LMLLRSVIAAGAEYVDIEADVAAQ------IPRYGNTKRIIS-Y 110
Query: 130 LNGGGKPTTEKLGDVIACMQATGADVMKLEIAVDSITDLAPVFEMLTHCQVPLIALAVGS 189
+ G P E L ++ M A AD++K+ +S +D + + + +P I + +G
Sbjct: 111 HDFSGTP--ENLDELHEAMAAEDADIVKIACMANSFSDNIRMINLCKNANIPTIGICMGE 168
Query: 190 RGLISQLLGPKFGGFLVYGSLGG--KSVPGLPTLVSLKQVYQLEHINPDTKIFGLVSNPV 247
G+++++L + G Y + K PG + VY E I DT +FG++++PV
Sbjct: 169 IGMLTRILANRVGSPFTYATFSSDKKLAPGQLNWKEMNSVYHYETIKEDTALFGVIADPV 228
Query: 248 GHSKGPILHNPAFRHTRFNGIYVPMLV--DDVKEFFRTYSGTDFAGFSVGIPHKEPAVAC 305
HS P++HN AF N Y+P+ V DD+ F RT G S+ IPHKE A+
Sbjct: 229 AHSHSPLIHNAAFVDAGLNARYLPLRVPKDDLPSFMRTCKELGIQGISITIPHKESALQY 288
Query: 306 CDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALRERQGINGVASHTSPI 365
C + IGA+NT+I D +GYNTD +A+ IE++ + +G + +
Sbjct: 289 CTQAESSCTGIGAINTMIFNGDD--RLGYNTDYRAAMDCIEESFKIERGTE------NSL 340
Query: 366 AGKIFVLVGAGGAGRALAFGAKSRGARVIIFNRNYERAKALADAVSGEALHFEYLHEFFP 425
GK +++GAGG RA+A+G + R V I +R ERA+ LA + + +E HE
Sbjct: 341 QGKTALVLGAGGVSRAIAWGLRQRKCDVTISSRTRERAEMLAADIGCRVIDWEERHE--- 397
Query: 426 EKGMILANASAIGMEPNSDQSPVPKEALKAYELVFDAVYTPRNTRLLREAAEVGATVVSG 485
K +L N + IGM P+ D +P + AL + +VFD VY P NT L+++A + + V++G
Sbjct: 398 AKVQLLINGTPIGMHPDVDNTPFNQSALNQFMVVFDTVYNPENTLLIKQATQKQSRVITG 457
Query: 486 VEMFIRQALGQFRLFTGGLAPEDFMRKLVLE 516
V+MF+RQA QF+LFTG A + MRK + E
Sbjct: 458 VDMFVRQAAYQFKLFTGQEASIELMRKKIKE 488
>gi|449134129|ref|ZP_21769633.1| protein containing Quinate/shikimate 5-dehydrogenase
[Rhodopirellula europaea 6C]
gi|448887232|gb|EMB17617.1| protein containing Quinate/shikimate 5-dehydrogenase
[Rhodopirellula europaea 6C]
Length = 496
Score = 263 bits (672), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 163/511 (31%), Positives = 267/511 (52%), Gaps = 27/511 (5%)
Query: 10 LVCTQLECETTEEMQASIEQAKVEGADLVELCIDSMEFSHISEVDKLIQHPTLPAIVSYR 69
++C L + M A + +GA LVEL +D + S ++ +L+ P + + R
Sbjct: 1 MICVSLGRARHKRMIAEHQFLVEQGAQLVELRLDYI--SRAVDLKRLLNDRPGPVVATVR 58
Query: 70 LKSSRKSSDEACKNTCLQVLRRALDLDVEFVEMDYEVASDPLMSEIIYSRSNTKIIVSSY 129
K + + ++ L +LR + E+V+++ +VA+ I NTK I+S Y
Sbjct: 59 RKEDGGRWERSEQDR-LMLLRSVIAAGAEYVDIEADVAAQ------IPRYGNTKRIIS-Y 110
Query: 130 LNGGGKPTTEKLGDVIACMQATGADVMKLEIAVDSITDLAPVFEMLTHCQVPLIALAVGS 189
+ G P E L ++ M A AD++K+ +S +D + + + ++P I + +G
Sbjct: 111 HDFSGTP--ENLDELHEAMAAEDADIVKIACMANSFSDNIRMINLCKNAKIPTIGICMGE 168
Query: 190 RGLISQLLGPKFGGFLVYGSLGG--KSVPGLPTLVSLKQVYQLEHINPDTKIFGLVSNPV 247
G+++++L + G Y + K PG + VY E I DT +FG++++PV
Sbjct: 169 IGMLTRILANRVGSPFTYATFSSDKKLAPGQLNWKEMNSVYHYETIKEDTALFGVIADPV 228
Query: 248 GHSKGPILHNPAFRHTRFNGIYVPMLV--DDVKEFFRTYSGTDFAGFSVGIPHKEPAVAC 305
HS P++HN AF N Y+P+ V DD+ F RT G S+ IPHKE A+
Sbjct: 229 AHSHSPLIHNAAFVDAGLNARYLPLRVPKDDLPSFMRTCKELGIQGISITIPHKESALQY 288
Query: 306 CDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALRERQGINGVASHTSPI 365
C + IGA+NT+I D +GYNTD +A+ IE++ + +G + +
Sbjct: 289 CTQAESSCTGIGAINTMIFNGDD--RLGYNTDYRAAMDCIEESFKIERGTE------NSL 340
Query: 366 AGKIFVLVGAGGAGRALAFGAKSRGARVIIFNRNYERAKALADAVSGEALHFEYLHEFFP 425
GK +++GAGG RA+A+G + R V I +R ERA+ LA + + +E HE
Sbjct: 341 QGKTALVLGAGGVSRAIAWGLRQRKCDVTISSRTRERAEMLAADIGCRVIDWEERHE--- 397
Query: 426 EKGMILANASAIGMEPNSDQSPVPKEALKAYELVFDAVYTPRNTRLLREAAEVGATVVSG 485
K +L N + IGM P+ D +P + AL + +VFD VY P NT L+++A + + V++G
Sbjct: 398 AKVQLLINGTPIGMHPDVDNTPFNQSALNQFMVVFDTVYNPENTLLIKQATQKQSRVITG 457
Query: 486 VEMFIRQALGQFRLFTGGLAPEDFMRKLVLE 516
V+MF+RQA Q++LFTG A + MRK + E
Sbjct: 458 VDMFVRQAAYQYKLFTGQEASIELMRKKIKE 488
>gi|449017210|dbj|BAM80612.1| fusion protein of 3-dehydroquinate dehydratase and shikimate
5-dehydrogenase [Cyanidioschyzon merolae strain 10D]
Length = 542
Score = 258 bits (660), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 192/535 (35%), Positives = 293/535 (54%), Gaps = 35/535 (6%)
Query: 10 LVCTQLECETTEEMQASIEQAKVEGADLVELCIDSMEFSHISEVDKLIQHPTLPAIVSYR 69
L+CT + + EE A + +A+ GADLVE D + + ++++ LP + +YR
Sbjct: 11 LICTSITANSAEEAIADMYEARRAGADLVEFRADYL--AEGESWERVVDQRPLPMVFTYR 68
Query: 70 LKSSRKSSDEACKNTCLQVLRRALDLDVEFVEMDYEVASDPL--MSEIIY---SRSNTKI 124
SD + +++L+RA+ VE+V D E+A+ L M E + + + ++
Sbjct: 69 PVCEGGLSDMN-DHERVRLLQRAVQHGVEYV--DVELANMDLFRMPESVQLQDASTRPRL 125
Query: 125 IVSSYLNGGGKPTTE-KLGDVIACMQATGADVMKLEIAVDSITDLAPVFEML--THCQVP 181
IVS + +P TE +L ++ + ATGAD+ K+ + + D A +F +L T P
Sbjct: 126 IVSYH--SFTRPLTEAELAEIYTAIVATGADICKIAMMCHDLCDNARLFALLKRTAGSKP 183
Query: 182 LIALAVGSRGLISQLLGPKFG-GFLVYGSL--GGKSVPGLPTLVSLKQVYQLEHINPDTK 238
IA+ +G G IS++L KFG L + +L S PG + L Y+ +NPDT
Sbjct: 184 TIAIGMGEYGQISRVLAAKFGPAMLTFTTLSEARASAPGQFRIEELIDHYRFHSLNPDTT 243
Query: 239 IFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLVDD---VKEFFRTYSGTDFAGFSVG 295
++G++ PV HS P +HN AF R N +Y+P LV D +++F T + G SV
Sbjct: 244 VYGVIGAPVRHSMSPRIHNHAFGLCRLNHVYLPFLVQDGSKLQKFLDTMTQFGLRGASVT 303
Query: 296 IPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALRERQGI 355
IPHK+ + C DE+ +AK IGAVNTI+ P+ G+ GYNTD ++A+ A+ + L GI
Sbjct: 304 IPHKQRIMECLDELDDVAKQIGAVNTIVVDPLTGRRKGYNTDWQAAVDAVSETLMP--GI 361
Query: 356 NGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGA-RVIIFNRNYERAKALAD------ 408
+ + + + VL+GAGGA RA+AFG G ++ I NR ERA++LA+
Sbjct: 362 EQGQARLTALQRRHVVLLGAGGAARAIAFGVVHCGCGKLTIVNRTLERARSLANDLSPFG 421
Query: 409 -----AVSGEALHFEYLHEFFPEKGMILANASAIGMEPNSDQSPVPKEALKAYELVFDAV 463
A+S E + + E+ IL N+++IGM P+ + PVP+E L+ + LVFDAV
Sbjct: 422 KTELVALSLEDFCQQQRNPATRERIDILMNSTSIGMHPDVNVVPVPEEILEPHCLVFDAV 481
Query: 464 YTPRNTRLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRKLVLEQF 518
Y P TRLL A G V GVEMF+RQA QF ++TG AP MR +VL++
Sbjct: 482 YNPIETRLLSLAKRRGCLTVDGVEMFVRQAAAQFTIWTGLRAPAQEMRNIVLQEL 536
>gi|384250424|gb|EIE23903.1| shikimate 5-dehydrogenase, partial [Coccomyxa subellipsoidea C-169]
Length = 514
Score = 258 bits (660), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 198/529 (37%), Positives = 294/529 (55%), Gaps = 51/529 (9%)
Query: 17 CETTEEMQASIEQAKVEGADLVELCIDSME----FSHISEVDKLIQHPT---LPAIVSYR 69
+T A I + GAD+VEL +D ++ F+ + ++ L+ LPAIV++R
Sbjct: 4 ADTVNGAIAEIREVADFGADVVELRMDFLKDIDLFNPAAFLNPLLDACNAVRLPAIVTFR 63
Query: 70 LKSSRKSSDEACKNTCLQVLRRALDLDVEFVEMDYEVASDPLMSEIIYSRS-------NT 122
D + L VL+ A L +V+++Y A+ SE +++ + T
Sbjct: 64 PNWEGGQYD-GPEPLRLAVLKYAAVLGAPYVDVEYLAANFFFASECMHAGTGEGEVPLTT 122
Query: 123 KIIVSSYLNGGGKPTTEKLGDVIACMQATGADVMKLEIAVDSITDLAPVFEM--LTHCQV 180
K+I+S + + P+ E L ++ M GAD+ K+ I D A + + + +
Sbjct: 123 KVILSHH-DYDETPSDEILEALVKEMFKGGADIAKIATTAQRIEDSARMLALPGKSSGER 181
Query: 181 PLIALAVGSRGLISQLLGPKFGGFLVYGSL--GGKSVPGLPTLVSLKQVYQLEHINPDTK 238
P+IALA+G +GL S++L PKFGG+L +G+L S PG PT+ L+Q+Y+L++ + TK
Sbjct: 182 PVIALAMGEKGLTSRVLAPKFGGYLTFGALSPAKASAPGQPTVTELRQLYRLQNQSSATK 241
Query: 239 IFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLVDDVKEFFRTYSGTDFAGFSVGIPH 298
+FG+V NPV HS+ P LHN A + +YVP+LVD+++ F Y F+G S+ IPH
Sbjct: 242 VFGIVGNPVSHSRSPALHNAALAAAGLDAVYVPLLVDELRPFLDAYP--SFSGISITIPH 299
Query: 299 KEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALRERQGINGV 358
K A+ C D+ P+A IGA NT++R+P G L YNTD +AISA+E AL +
Sbjct: 300 KLAALECADDADPVAARIGAANTLVRQP-GGGLKAYNTDWSAAISAVEAALGGSK----- 353
Query: 359 ASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGARVIIFNRN-----------YERAKALA 407
A S + G V+VGAGGAG+ALAFGA RGA V++ NR + A A
Sbjct: 354 AGGESALKGLRVVVVGAGGAGKALAFGAIERGAEVLVCNRQGHPCTFLIIQWTDMAVEYA 413
Query: 408 DAVSGEALHFEYLHEFFPEKGMILANASAIGMEPNSDQSPVPKEALKAYELVFDAVYTPR 467
D +G+ G +L N+++IGM P +++PV AL Y++VFDAVYTP
Sbjct: 414 DVAAGKV------------AGDVLMNSTSIGMHPKENETPVSAGALGGYKVVFDAVYTPL 461
Query: 468 NTRLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRKLVLE 516
T LL++A + G VSG+EMF+ QA QF LFTG AP D MR+ L+
Sbjct: 462 ETLLLKDAKDQGCITVSGLEMFVGQAAEQFELFTGKPAPLDLMRQATLD 510
>gi|356533611|ref|XP_003535355.1| PREDICTED: LOW QUALITY PROTEIN: bifunctional 3-dehydroquinate
dehydratase/shikimate dehydrogenase, chloroplastic-like
[Glycine max]
Length = 455
Score = 256 bits (654), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 169/436 (38%), Positives = 252/436 (57%), Gaps = 17/436 (3%)
Query: 6 KNSLLVCTQLECETTEEMQASIEQAKVEGADLVELCIDSMEFSHISEVDK-LIQHPTLPA 64
+NS +C E EE + +AK GADLVE +D ++ H ++ + LI + LP
Sbjct: 19 RNSTPICASTTAEWVEEKVFEMVKAKELGADLVEARLDFLKDFHPAQHHQSLINNRPLPI 78
Query: 65 IVSYR--LKSSRKSSDEACKNTCLQVLRRALDLDVEFVEMDYEVASDPLMSEIIYSRSNT 122
+++YR + DE+ + LR+A++L EFV+ D + +
Sbjct: 79 LITYRPIXEGGESDGDESQRQ---DALRQAIELGSEFVDDDRAKGGSXSIGG--KKPESV 133
Query: 123 KIIVSSYLNGGGKPTTEKLGDVIACMQATGADVMKLEIAVDSITDLAPVFEML-----TH 177
KIIVSS+ N P+ E++G++ A +QA+GADV+K+ T + +F +
Sbjct: 134 KIIVSSH-NLERTPSVEEIGNLAARIQASGADVVKIATTAFDNTXILNLFMKIFKKXXKK 192
Query: 178 CQVPLIALAVGSRGLISQLLGPKFGGFLVYGSL--GGKSVPGLPTLVSLKQVYQLEHINP 235
QVP+I +A+ G+ +L KFGGFL +GS+ G S PG T+ L +Y I
Sbjct: 193 KQVPMIGIAMRXEGIFVTVLCAKFGGFLTFGSVEAGAISAPGQXTIKELLDLYNFRQIGV 252
Query: 236 DTKIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLVDDVKEFFRTYSGTDFAGFSVG 295
TK+ G V NP+ SK P L+N F+ F+G+Y+P+LVD+V +F TYS DF G++
Sbjct: 253 GTKVHGAVGNPISDSKSPHLYNATFKSVGFDGVYLPLLVDNVSDFLNTYSSPDFVGYNYT 312
Query: 296 IPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALRERQGI 355
IP KE + CCDE+ P+AK+IGA++ +I+RP DGKL+G N D AI+AIE+ L +
Sbjct: 313 IPPKENGLRCCDEIDPIAKAIGAISCMIKRPNDGKLLGNNFDYLGAIAAIEERLHLQDSN 372
Query: 356 NGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGARVIIFNRNYERAKALADAVSGEAL 415
S SP+ GK+FV++GAGGAG+A+A+G K +GARV++ NR Y +AK L V GEA+
Sbjct: 373 RRSISGCSPLCGKLFVVMGAGGAGKAIAYGGKEKGARVVVANRIYAKAKELVTKVGGEAI 432
Query: 416 HFEYLHEFFPEKGMIL 431
L E F KG++L
Sbjct: 433 TISEL-ESFHTKGLVL 447
>gi|451981182|ref|ZP_21929555.1| Similar to 3-dehydroquinate dehydratase / shikimate 5-dehydrogenase
[Nitrospina gracilis 3/211]
gi|451761592|emb|CCQ90808.1| Similar to 3-dehydroquinate dehydratase / shikimate 5-dehydrogenase
[Nitrospina gracilis 3/211]
Length = 495
Score = 249 bits (637), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 144/434 (33%), Positives = 243/434 (55%), Gaps = 32/434 (7%)
Query: 88 VLRRALDLDVEFVEMDYEVASDP-LMSEIIYSRSNTKIIVSSYLNGGGKPTTEKLGDVIA 146
V+++A++L ++ D E ++ P L+ ++ ++ +K I+S + T +K+ +
Sbjct: 75 VIKQAIELGAMYI--DIETSTPPELLRSVLENKGKSKAILSHH---DFTRTDDKVDALYE 129
Query: 147 CMQATGADVMKLEIAVDSITDLAPVFEMLTHC---QVPLIALAVGSRGLISQLLGPKFGG 203
M ADV+K+ ++D + ++L+ +V LIA +G +G +S++L P +GG
Sbjct: 130 LMTQMPADVLKIITYAQDLSDNLRLLQLLSRARRDEVKLIAFCMGEKGEVSRILSPMYGG 189
Query: 204 FLVYGSL--GGKSVPGLPTLVSLKQVYQLEHINPDTKIFGLVSNPVGHSKGPILHNPAFR 261
+L +GSL G +S PG +LK +Y++ +N D+KIFG++ +PV S G ++HN AF
Sbjct: 190 WLTFGSLDRGKESAPGQIPATTLKHIYRVNELNLDSKIFGVIGDPVNKSMGYLIHNRAFS 249
Query: 262 HTRFNGIYVPMLVDDVKEFFRTYSGTDFAGFSVGIPHKEPAVACCDEVHPLAKSIGAVNT 321
+YVP V + FF TY F G SV +P KE + + + PLA+ IGAVNT
Sbjct: 250 ELNLPNVYVPFWVKSLTRFFNTYQAY-FTGLSVTMPFKEDIMKHMNRIDPLAQKIGAVNT 308
Query: 322 IIRRPIDGKLVGYNTDCESAISAIEDALRERQGINGVASHTSPIAGKIFVLVGAGGAGRA 381
++R D VGYNTD A+SA+ + + + G +++GAGG +A
Sbjct: 309 VVREGND--WVGYNTDVTGALSAL--------------TAVTELKGTRVLIIGAGGTAKA 352
Query: 382 LAFGAKSRGARVII-FNRNYERAKALADAVSGEALHFEYLHEFFPEKGMILANASAIGME 440
+ G +GA + + +NRN E+A+ALA ++ + + + + + I+ N S GM
Sbjct: 353 IGHGVTEQGAALTLTYNRNKEKAEALAQELNAKLIS---IRDIDAHETDIVINCSPAGMT 409
Query: 441 PNSDQSPVPKEALKAYELVFDAVYTPRNTRLLREAAEVGATVVSGVEMFIRQALGQFRLF 500
PN+ +P P LK +VFD+VY P TRL+++A E G TV+ G+E+F+ QA+ Q +L+
Sbjct: 410 PNTKDTPYPARLLKPGMVVFDSVYNPMETRLIKDAREKGCTVIPGIELFVNQAIEQLKLW 469
Query: 501 TGGLAPEDFMRKLV 514
TG P D + ++V
Sbjct: 470 TGTTPPRDPLHEVV 483
>gi|320102191|ref|YP_004177782.1| shikimate 5-dehydrogenase [Isosphaera pallida ATCC 43644]
gi|319749473|gb|ADV61233.1| shikimate 5-dehydrogenase [Isosphaera pallida ATCC 43644]
Length = 527
Score = 249 bits (635), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 168/492 (34%), Positives = 254/492 (51%), Gaps = 30/492 (6%)
Query: 34 GADLVELCIDSMEFSHISEVDKLIQHPTLPAIVSYRL--KSSRKSSDEACKNTCLQVLRR 91
GA LVEL +D + ++ +++ + P +V+ R DE + ++LR
Sbjct: 27 GAQLVELRLDCLRRD--IDLKRILANRYSPCVVTIRRGRDGGIWRQDEERRQ---RLLRE 81
Query: 92 ALDLDVEFVEMDYEVASDPLMSEIIYSRSNTKIIVSSYLNGGGKPTTEKLGDVIACMQAT 151
A+ + V++V+++ ++A + I K I+S + K T ++L D+I M
Sbjct: 82 AIVMGVDYVDIEADIAKE------IRRFGKVKRIISYH---NFKETPKELPDIIQKMATL 132
Query: 152 GADVMKLEIAVDSITDLAPVFEMLTHCQVPLIALAVGSRGLISQLLGPKFGGFLVYGSLG 211
AD++K+ SI D A V + + VP IA+A+G G +++LG K+G L Y S
Sbjct: 133 DADIVKVATIATSIQDAAFVLKTASEAPVPTIAIAMGEVGFFTRILGAKYGAPLTYASFN 192
Query: 212 GKS--VPGLPTLVSLKQVYQLEHINPDTKIFGLVSNPVGHSKGPILHNPAFRHTRFNGIY 269
PGLP LK+ Y+ E I+ T+++G++ +PV S P++HN F H N +Y
Sbjct: 193 PDRSFAPGLPNFRDLKRDYRFEKIDSATEVYGVIGDPVAQSLSPMVHNAIFEHYGQNKVY 252
Query: 270 VPMLVDDVK--EFFRTYSGTDFAGFSVGIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPI 327
VP V + K FF + G SV IPHKE DE + ++ G+ NT+ RP
Sbjct: 253 VPFKVAEGKLPTFFESLDFLKLKGLSVTIPHKEAIRQHLDEEDDIVETTGSCNTVEIRP- 311
Query: 328 DGKLVGYNTDCESAISAIEDALRERQGINGVASHTSPIAGKIFVLVGAGGAGRALAFGAK 387
DG VG+NTD + I +EDAL R SP+ GK +LVGAGG R++A+
Sbjct: 312 DGTRVGHNTDYPAVIETLEDALGGRPN-----PALSPLEGKQALLVGAGGVARSIAYALT 366
Query: 388 SRGARVIIFNRNYERAKALADAVSGEALHFEYLHEFFPEKGMILANASAIGMEPNSDQSP 447
GA V I RN E++KALA+ V + + + + IL NA+ +GM P +++P
Sbjct: 367 RHGAGVTIVARNDEKSKALAEEVGCKFVPWTMRASTLSD---ILINATPVGMHPEVNETP 423
Query: 448 VPKEALKAYELVFDAVYTPRNTRLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPE 507
+P A + LVFD VY P NT L+ E + +GVEMF+RQA Q R F G P
Sbjct: 424 LPPAAFRENILVFDTVYHPENTLFLKLGREHNCKIATGVEMFVRQAARQARFFAGVENPP 483
Query: 508 -DFMRKLVLEQF 518
D +R LV +F
Sbjct: 484 LDVIRGLVRRKF 495
>gi|283781777|ref|YP_003372532.1| shikimate 5-dehydrogenase [Pirellula staleyi DSM 6068]
gi|283440230|gb|ADB18672.1| shikimate 5-dehydrogenase [Pirellula staleyi DSM 6068]
Length = 495
Score = 244 bits (622), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 157/487 (32%), Positives = 256/487 (52%), Gaps = 32/487 (6%)
Query: 34 GADLVELCIDSMEFSHISEVDKLIQHPTLPAIVSYRLKSS--RKSSDEACKNTCLQVLRR 91
GA LVEL +D + S ++ L + PT P +++ R + R S E + +LR+
Sbjct: 26 GAQLVELRLDYI-MSDVNLRRLLPERPT-PVVITVRRQRDGGRWSRSEDQRQV---LLRQ 80
Query: 92 ALDLDVEFVEMDYEVASDPLMSEIIYSRSNTKIIVSSYLNGGGKPTTEKLGDVIACMQAT 151
A+ VE+V+++ ++A I TK IVS Y N + T E L + M
Sbjct: 81 AIASGVEYVDLEEDIAGS------IPRFGKTKRIVS-YHNF--QETPENLAALHERMSKL 131
Query: 152 GADVMKLEIAVDSITDLAPVFEMLTHCQVPLIALAVGSRGLISQLLGPKFGGFLVYGSLG 211
AD++K+ + +D + +++ ++P +A+A+G G S++LG KFG L Y +
Sbjct: 132 DADIVKIATMAHTPSDTTRLVQLMKGAKIPTVAIAMGEIGTPSRILGGKFGSPLTYAAFS 191
Query: 212 GKS--VPGLPTLVSLKQVYQLEHINPDTKIFGLVSNPVGHSKGPILHNPAFRHTRFNGIY 269
PG + ++ VY + IN DT++FG+V++PVGHS P+LHN AFR N +Y
Sbjct: 192 SDRELAPGQLSYEQMRAVYHYDDINADTEVFGVVADPVGHSMSPLLHNAAFRALSMNRVY 251
Query: 270 VPMLV--DDVKEFFRTYSGTDFAGFSVGIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPI 327
+P+ V + + +F + G SV IPHKE + + I A NT+I +
Sbjct: 252 LPLRVPREHLAKFLQDCPELGIKGLSVTIPHKEEVIQHLVKTDDATTEIAACNTVIWK-- 309
Query: 328 DGKLVGYNTDCESAISAIEDALRERQGINGVASHTSPIAGKIFVLVGAGGAGRALAFGAK 387
+GK VGYNTD +++++I+ G S +AGK +L+GAGG +A+A G +
Sbjct: 310 EGKPVGYNTDYRASMASIDRLF-------GGDEKQSGLAGKTALLLGAGGVSKAIACGLR 362
Query: 388 SRGARVIIFNRNYERAKALADAVSGEALHFEYLHEFFPEKGMILANASAIGMEPNSDQSP 447
RG V+I +R E+++ALA + ++ H + ++ N + +GM PN D+SP
Sbjct: 363 RRGCDVVIASRTLEKSEALAKKFKARTIDWKLRHSV---QAHLVVNGTPLGMHPNLDESP 419
Query: 448 VPKEALKAYELVFDAVYTPRNTRLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPE 507
+ + + FD VY P T ++ A E GA ++G++MF+ QA QF+LFT P
Sbjct: 420 IDEGYFSTDMVAFDTVYNPEQTLFIKRAREAGAKTITGIDMFVGQAALQFKLFTAHDPPM 479
Query: 508 DFMRKLV 514
D MR+ +
Sbjct: 480 DLMRQTI 486
>gi|149175942|ref|ZP_01854559.1| 3-dehydroquinate dehydratase / shikimate 5-dehydrogenase precursor
[Planctomyces maris DSM 8797]
gi|148845096|gb|EDL59442.1| 3-dehydroquinate dehydratase / shikimate 5-dehydrogenase precursor
[Planctomyces maris DSM 8797]
Length = 498
Score = 240 bits (612), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 152/490 (31%), Positives = 257/490 (52%), Gaps = 39/490 (7%)
Query: 33 EGADLVELCIDSMEFSHISEVDKLIQHPTLPAIVSYRLKSSRKSSDEACKNTCLQVLRRA 92
+GA+LVEL +D + + +V++LI+ P +++ R + K + +LR A
Sbjct: 24 KGAELVELRLDWI--ARTPDVNRLIKDRPTPVVITCR-RPEDKGRWNKTEEQRQALLRTA 80
Query: 93 LDLDVEFVEMDYEVASDPLMSEIIYSRSNTKIIVSSYLNGGGKPTTEKLGDVIACMQATG 152
+ +VE+V+++ ++A I TK I+S + T + L ++ A M
Sbjct: 81 IVSEVEYVDIEDDIAG------TIPRYGKTKRIISHH---NFDETPDDLEEIHAAMCKKD 131
Query: 153 ADVMKLEIAVDSITDLAPVFEMLTHCQVPLIALAVGSRGLISQLLGPKFGGFLVYGSLGG 212
D++KL +S D + +++ + +VP I +G G+IS++L K+G Y +
Sbjct: 132 PDIVKLVTMANSPGDSVRMLQLVANAKVPTIGFCMGEYGVISRILCGKYGSPFTYATFSR 191
Query: 213 KS--VPGLPTLVSLKQVYQLEHINPDTKIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYV 270
+ PG + ++Y+ + I P+T ++G++ +P+ HS P++HN AF+H + + +Y+
Sbjct: 192 ERELAPGQLAFSEMSRIYRYDEIGPETPVYGVIGDPIAHSLSPLIHNLAFKHDKLDAVYL 251
Query: 271 PMLV--DDVKEFFRTYSGTDFAGFSVGIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPID 328
P + D +KE + + + G+SV IPHK A+ DE +K +G NT+ + D
Sbjct: 252 PFRIPKDRLKETLKEFEWLNVQGYSVTIPHKAGALELADEADEASKKMGVANTLFK---D 308
Query: 329 GK--LVGYNTDCESAISAIEDALRERQGINGVASHTS-PIAGKIFVLVGAGGAGRALAFG 385
K NTD ++A+ +I R G++ T+ PI GK +L+GAGG RA+ G
Sbjct: 309 DKKAWQARNTDYDAALDSI------RLGLDPQGKATADPINGKQVLLLGAGGVSRAIGAG 362
Query: 386 AKSRGARVIIFNRNYERAKALADAVSGEALHFEYLHEFFPEKGM----ILANASAIGMEP 441
+ G + I NR+ R + LA + H + +G IL N +A+GM P
Sbjct: 363 IVAAGGVLTISNRSRTRGEQLAKDLGCN-------HCTWENRGSGRYDILVNGTAVGMYP 415
Query: 442 NSDQSPVPKEALKAYELVFDAVYTPRNTRLLREAAEVGATVVSGVEMFIRQALGQFRLFT 501
N + +P + ++ LVFD VY P NT LL++A E G VSG+EMF+RQA Q++LFT
Sbjct: 416 NVNDTPFAQNFMQEEMLVFDTVYNPENTLLLKQARERGCKTVSGIEMFVRQAAAQYKLFT 475
Query: 502 GGLAPEDFMR 511
G AP + MR
Sbjct: 476 GKEAPLEVMR 485
>gi|449531177|ref|XP_004172564.1| PREDICTED: bifunctional 3-dehydroquinate dehydratase/shikimate
dehydrogenase, chloroplastic-like, partial [Cucumis
sativus]
Length = 328
Score = 236 bits (602), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 128/318 (40%), Positives = 197/318 (61%), Gaps = 9/318 (2%)
Query: 2 EVAAKNSLLVCTQLECETTEEMQASIEQAKVEGADLVELCIDSME-FSHISEVDKLIQHP 60
E ++NS L+C + E+ ++M +++A GAD+VE+ +D+++ F+ ++ LI+
Sbjct: 15 EGISRNSTLICVPIMSESIDKMIVDVKKAGENGADIVEIRLDALKIFNPHEDLKLLIKES 74
Query: 61 TLPAIVSYR--LKSSRKSSDEACKNTCLQVLRRALDLDVEFVEMDYEVASDPLMSEIIYS 118
LP + +YR + + DE N L VLR A+ L ++++++ +VA + + S
Sbjct: 75 PLPTLFTYRPNWEGGQYDGDE---NQRLDVLRLAMKLGADYIDVELQVAREFIDSIQQEK 131
Query: 119 RSNTKIIVSSYLNGGGKPTTEKLGDVIACMQATGADVMKLEIAVDSITDLAPVFEMLTHC 178
+N K+IVS++ N P+ E LG ++A +QATGAD++K+ ITD+A +F++L +
Sbjct: 132 PNNFKVIVSNH-NYKKTPSLEDLGSLVAEIQATGADIVKIATTALDITDVARMFQVLVYS 190
Query: 179 QVPLIALAVGSRGLISQLLGPKFGGFLVYGSL--GGKSVPGLPTLVSLKQVYQLEHINPD 236
QVP+I L + RG I +LL PK+GG+L +G+L G S PG PT+ L +Y HI PD
Sbjct: 191 QVPIIGLVMKDRGFICRLLCPKYGGYLTFGTLEEGIVSAPGQPTIKDLLNLYNFRHIGPD 250
Query: 237 TKIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLVDDVKEFFRTYSGTDFAGFSVGI 296
TK+FG++ NPVG SK P L+N F+ + IYVP+LVDD +F TYS +D GFSV I
Sbjct: 251 TKVFGIIGNPVGDSKLPALYNELFKLVGLDAIYVPLLVDDPTKFLDTYSSSDIGGFSVTI 310
Query: 297 PHKEPAVACCDEVHPLAK 314
PHKE CDEV +AK
Sbjct: 311 PHKEAVFKYCDEVDSVAK 328
>gi|325110056|ref|YP_004271124.1| 3-dehydroquinate dehydratase [Planctomyces brasiliensis DSM 5305]
gi|324970324|gb|ADY61102.1| 3-dehydroquinate dehydratase; shikimate dehydrogenase [Planctomyces
brasiliensis DSM 5305]
Length = 496
Score = 232 bits (591), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 155/510 (30%), Positives = 252/510 (49%), Gaps = 34/510 (6%)
Query: 10 LVCTQLECETTEEMQASIEQAKVEGADLVELCIDSMEFSHISEVDKLIQ-HPTLPAIVSY 68
++C + + M+A E GA LVEL +D ++ H++++ L++ PT I
Sbjct: 1 MICVSVGRTRLKMMRAEHEALSRAGAQLVELRLDWLK--HVNDISLLLKDRPTATVITCR 58
Query: 69 RLKSS---RKSSDEACKNTCLQVLRRALDLDVEFVEMDYEVASDPLMSEIIYSRSNTKII 125
R + R S DE K +LR A+ VEFV+++ ++A I T+ I
Sbjct: 59 RAEDQGKWRGSEDERQK-----LLRAAIVDGVEFVDIEVDIAKS------IPRYGKTRRI 107
Query: 126 VSSYLNGGGKPTTEKLGDVIACMQATGADVMKLEIAVDSITDLAPVFEMLTHCQVPLIAL 185
VS + + T + L ++ + A+ DV K+ +S D + E++ ++P +
Sbjct: 108 VSYH---NFEETPDNLEEIHKQIAASDPDVAKIVTMANSPADGVRMLELVAKSKIPTVGF 164
Query: 186 AVGSRGLISQLLGPKFGGFLVYGSLGGKS--VPGLPTLVSLKQVYQLEHINPDTKIFGLV 243
+G GL +++L K+G Y S + PG + + ++Y+ + I+ DT++FG++
Sbjct: 165 CMGEFGLFTRVLCTKYGAPFTYASFSSERELAPGQISFREMLELYRHDQIDVDTRVFGVL 224
Query: 244 SNPVGHSKGPILHNPAFRHTRFNGIYVPMLVDD--VKEFFRTYSGTDFAGFSVGIPHKEP 301
+P+ HS P LHN AF + N +Y+P + + ++ R + GFS+ IPHKE
Sbjct: 225 GDPIAHSYSPRLHNDAFEAEKINAVYLPFRISEQHFEDSMRALRRLNTEGFSITIPHKER 284
Query: 302 AVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALRERQGINGVASH 361
V D AK IGA NT+ R G NTD E+A++A+ RQ
Sbjct: 285 IVTQADHTDDDAKEIGAANTLYRNQ-KGIWFATNTDFEAAMTAL------RQATKKAGWP 337
Query: 362 TSPIAGKIFVLVGAGGAGRALAFGAKSRGARVIIFNRNYERAKALADAVSGEALHFEYLH 421
+ +++GAGG RA+ G G ++++ R RAK LA+ + + +E
Sbjct: 338 EGGFKDRKVLILGAGGVARAIGHGVVRGGGQLVVTGRTRSRAKELAEKLGCQHCSWENRG 397
Query: 422 EFFPEKGMILANASAIGMEPNSDQSPVPKEALKAYELVFDAVYTPRNTRLLREAAEVGAT 481
PE +L N + IGM PN D++P + + +VFD +Y P NT L+++A E
Sbjct: 398 AQRPE---VLINCTPIGMFPNMDETPYEQHWMTDGMVVFDTIYNPENTLLVKQARERDCH 454
Query: 482 VVSGVEMFIRQALGQFRLFTGGLAPEDFMR 511
+ SG+EMFIRQA QF FTG P D MR
Sbjct: 455 IASGLEMFIRQAAAQFECFTGQNPPLDTMR 484
>gi|424513634|emb|CCO66256.1| predicted protein [Bathycoccus prasinos]
Length = 562
Score = 229 bits (583), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 192/523 (36%), Positives = 271/523 (51%), Gaps = 51/523 (9%)
Query: 36 DLVELCIDSMEFSHISEVDKLIQH-----------PTLPAIVSYR--LKSSRKSSDEACK 82
D+VEL +D +E S S+ K+ + +P +V++R + + DE +
Sbjct: 42 DIVELRVDFLEKSIRSDERKMKEAIGQLVEACEKVAKIPCVVTFRPTWEGGQDDGDEETR 101
Query: 83 NTCLQVLRRA--LDLDVEFVEMDYEVASDPLMSEIIYSRSNTKIIVSSY-------LNGG 133
CL RA +D E + ++ + P + + +I SS+ L+
Sbjct: 102 LRCLWEGFRAGATYVDCELLAIERFAKAKPDERDGVIKGPGQMLICSSHEYELTPSLDVL 161
Query: 134 GKPTTEKLGDVIACMQATGADVMKLEIAVDSITD---LAPVFEMLTHCQVPLIALAVGSR 190
K EK+ C D+ K+ I D LA V E P L +
Sbjct: 162 LKEKYEKIRANDMC------DIAKIACVCQDINDVGRLAKVLEKARGDGYPCAVLGMSEH 215
Query: 191 GLISQLLGPKFGGFLVYGSL--GGKSVPGLPTLVSLKQVYQLEHINP-DTKIFGLVSNPV 247
GLIS+LL K G +L +GS+ G +S PG PTL L ++Y++ +TKI G++ NP+
Sbjct: 216 GLISRLLATKLGSYLTFGSIRAGFESAPGQPTLRDLSELYRVNTSQTRETKILGVMGNPI 275
Query: 248 GHSKGPILHNPAFRHTRFNG-IYVPMLVDDVKEFFRTYS-----GTDFAGFSVGIPHKEP 301
SK P LHN A + + YVP+LV D EF S D+ GFSV IPHKE
Sbjct: 276 AQSKSPQLHNKALISAKVDDKCYVPLLVKDFAEFVENESLFNNKNNDWVGFSVTIPHKES 335
Query: 302 AVACCDE-VHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALRERQGINGVAS 360
A+ C E V P+AK IGAVNT++R+ DG GYNTD +AI AIE AL + +
Sbjct: 336 ALKFCGENVDPVAKQIGAVNTLVRQK-DGSFRGYNTDYVAAIGAIEKALDPTIPRDAAET 394
Query: 361 HTSP-IAGKIFVLVGAGGAGRALAFGAKSRGARVIIFNRNYERAKALADAVSGEALHFEY 419
S + GK +++GAGGA R LAFGAK + A V++ NR+ +RA ALA+A G ++ E
Sbjct: 395 TDSKALKGKTVLVLGAGGAARGLAFGAKFKEANVVVANRSKDRADALAEACGGTSISVED 454
Query: 420 LH--EFFPEKGMILANASAIGM-EPNSDQSPVPKEALKAYELV--FDAVYTPRNTRLLRE 474
+ F K ++AN +++GM +++P PKEA+K V FDAVY P TRLLRE
Sbjct: 455 VASGNFGDLKIDVIANTTSLGMVGERVNETPCPKEAIKKSGAVVCFDAVYNPLETRLLRE 514
Query: 475 AAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDF--MRKLVL 515
A E G TV SG++MF+ QA QF LF G D+ MR+ VL
Sbjct: 515 AKECGLTVASGLDMFVGQAARQFELFNEG-QKADYAGMRETVL 556
>gi|383765626|ref|YP_005444607.1| 3-dehydroquinate dehydratase/shikimate dehydrogenase [Phycisphaera
mikurensis NBRC 102666]
gi|381385894|dbj|BAM02710.1| 3-dehydroquinate dehydratase/shikimate dehydrogenase [Phycisphaera
mikurensis NBRC 102666]
Length = 528
Score = 228 bits (582), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 171/527 (32%), Positives = 256/527 (48%), Gaps = 53/527 (10%)
Query: 10 LVCTQLECETTEEMQASIEQAKVEGADLVELCIDSMEFSHISEVDKLIQHPTLPAIVSYR 69
L+C + ++ A+ +A GADLVE D + +L+ +LP IV+ R
Sbjct: 3 LLCCPITVNDADDALAACGRAAEAGADLVEFRCDRFTDDR-DALARLVADASLPCIVTLR 61
Query: 70 LKSSRKSSDEACKNTCLQVLRRALDLDVEF-----VEMDYEVASDPLMS-----EIIYSR 119
S E + L+ LR L L + +D+E A +S ++ +
Sbjct: 62 HAS------EGGGFSGLESLRVGLLLFLSQQPRPPAYLDFEHARLAALSAGERADLEDAA 115
Query: 120 SNTKIIVSSYLNGGGKPTTEKLGDVIACMQATGADVMKLEIAVDSITDLAPVFEMLTHCQ 179
+ +I+S++ + G+P V+A G V+K A S+ D FE++
Sbjct: 116 TRCGLILSTH-DFAGRPADLDR-RVLAMADTPGVRVLKAAWAARSLRDNLQAFELIERRL 173
Query: 180 VPLIALAVGSRGLISQLLGPKFGGFLVYGSL--GGKSVPGLPTLVSLKQVYQLEHINPDT 237
P AL +G GL S++L KFGGF+ + + + PG PT+ L+ +Y+ + I P T
Sbjct: 174 APTAALCMGDAGLPSRVLARKFGGFVTFAAADRASGTAPGQPTIAELRDLYRWDAIGPAT 233
Query: 238 KIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLVDDVKEFFRT-------YSGTDFA 290
+++G++ +PVGHSK P LHN F + F+G+Y+PM + E + + F
Sbjct: 234 RVYGVIGDPVGHSKSPALHNAGFDASGFDGVYLPMPIPAGYEHLKATLSAWLDHGSLRFR 293
Query: 291 GFSVGIPHKEPAVACCDE----VHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIE 346
G SV IPHK + +E + PLA IGA NT+I DG L NTDC++A+ +
Sbjct: 294 GASVTIPHKADLLRFAEERGATIDPLAARIGAANTLIVGE-DGALAVRNTDCDAALGVV- 351
Query: 347 DALRERQGINGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGARVIIFNRNYERAKAL 406
R+ + GV + G ++GAGG RA+ G G RV +FNR+ ERA++L
Sbjct: 352 -----RRALGGVG-----LRGAAVAVLGAGGVSRAVVAGFADAGCRVTVFNRSVERARSL 401
Query: 407 ADAVSGEALHFEYLHEFFPEKGMILANASAIGME----PNSDQSPVPKE--ALKAYELVF 460
A A EA + + NA++IGME P D SP+P + +VF
Sbjct: 402 AAAFGVEAAPLAEAAAGAAD---VWINATSIGMETAEDPAPDASPLPDPPGSWGPGTVVF 458
Query: 461 DAVYTPRNTRLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPE 507
D VYTP TRLLR+AA G G MF+ QA QF +TG APE
Sbjct: 459 DTVYTPPETRLLRDAAAAGCVTAGGTAMFLAQAAAQFEAWTGVEAPE 505
>gi|430743501|ref|YP_007202630.1| shikimate 5-dehydrogenase [Singulisphaera acidiphila DSM 18658]
gi|430015221|gb|AGA26935.1| shikimate 5-dehydrogenase [Singulisphaera acidiphila DSM 18658]
Length = 497
Score = 228 bits (580), Expect = 8e-57, Method: Compositional matrix adjust.
Identities = 148/484 (30%), Positives = 246/484 (50%), Gaps = 29/484 (5%)
Query: 34 GADLVELCIDSMEFSHISEVDKLIQHPTLPAIVSYRLKSSRKSSDEACKNTCLQVLRRAL 93
G +LVEL +D + ++ +++ + P + + R + ++ Q+LR A+
Sbjct: 25 GVELVELRLDCLRRE--PDLKRILANRPTPLVFTIR-RGVDGGIWRGSEDRRQQLLREAI 81
Query: 94 DLDVEFVEMDYEVASDPLMSEIIYSRSNTKIIVSSYLNGGGKPTTEKLGDVIACMQATGA 153
L V++V+++ ++A I TK IVS + K T +L ++ A
Sbjct: 82 ALGVDYVDLEMDIAPK------IRRFGKTKRIVSYH---NLKKTPAELIEIAEQCDEMDA 132
Query: 154 DVMKLEIAVDSITDLAPVFEMLTHCQVPLIALAVGSRGLISQLLGPKFGGFLVYGSLGGK 213
DV+K+ +S+ D V + T VP + +A+G G +++LG K+ Y + +
Sbjct: 133 DVVKIATKAESLADALRVLSLGTRAVVPTVTIAMGELGFFTRVLGAKYKAPFTYAGINPE 192
Query: 214 SV--PGLPTLVSLKQVYQLEHINPDTKIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVP 271
PG+PT LK Y + IN +T+++ ++ +P+ S P +HN AFRH N + VP
Sbjct: 193 RTFAPGMPTFQVLKNDYAYDMINAETEVYAVIGDPIEQSLSPAIHNAAFRHLGLNKVLVP 252
Query: 272 MLV--DDVKEFFRTYSGTDFAGFSVGIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDG 329
+L+ ++ + + GFSV IPHKE V D+ + G+ NT++ + G
Sbjct: 253 LLIPAGTLEASLKELEVLNIQGFSVTIPHKEELVKLLDQKDGAVERTGSCNTLVFQ--KG 310
Query: 330 KLVGYNTDCESAISAIEDALRERQGINGVAS-HTSPIAGKIFVLVGAGGAGRALAFGAKS 388
K +G+NTD +A+ +E G+ G+ SP+ K +++GAGGA R+++FG
Sbjct: 311 KKIGHNTDYRAAMDTLE------AGMGGLKEGGASPLMDKQVLILGAGGAARSISFGCSR 364
Query: 389 RGARVIIFNRNYERAKALADAVSGEALHFEYLHEFFPEKGMILANASAIGMEPNSDQSPV 448
RGA V I NR+ RA LA+ V + + E I+ N + +GM PN D +PV
Sbjct: 365 RGASVTITNRHDARATKLAEEVGCRTVSWAQRASTLAE---IVVNCTPVGMHPNVDDTPV 421
Query: 449 PKEALKAYELV-FDAVYTPRNTRLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPE 507
P ++ FD +Y P NT L+ A E ++GV+MF+ QA QF+L+TG AP+
Sbjct: 422 PPATFSTPGMIAFDTIYHPENTMFLKLARERECIPINGVDMFVGQAAEQFKLYTGMDAPK 481
Query: 508 DFMR 511
D MR
Sbjct: 482 DIMR 485
>gi|406829999|ref|ZP_11089593.1| 3-dehydroquinate dehydratase [Schlesneria paludicola DSM 18645]
Length = 492
Score = 226 bits (575), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 160/509 (31%), Positives = 258/509 (50%), Gaps = 34/509 (6%)
Query: 10 LVCTQLECETTEEMQASIEQAKVE-GADLVELCIDSMEFSHISEVDKLIQHPTLPAIVSY 68
++C + T M + A E GA LVEL ID + + +V +L++ P IV+
Sbjct: 1 MICVSI-ARTRHRMMIAEHHALAERGAQLVELRIDWL--ARDPDVPRLLKDRPTPVIVTC 57
Query: 69 RLKSSRKSSDEACKNTCLQVLRRALDLDVEFVEMDYEVASDPLMSEIIYSRSNTKIIVSS 128
R ++ + +++LR A+ ++V+++ ++AS I TK IVS
Sbjct: 58 R-RAQDGGKWRGTEEARIRLLRTAIVSGADYVDLEDDIASS------IPRYGKTKRIVSH 110
Query: 129 Y-LNGGGKPTTEKLGDVIACMQATGADVMKLEIAVDSITDLAPVFEMLTHCQVPLIALAV 187
+ NG T + + +V A + D++K+ +S +D + +++ ++P +A +
Sbjct: 111 HDFNG----TPDHIEEVWAEIAEMNPDIIKVVTLANSPSDCVRMLKLVKDAKIPTVAFCM 166
Query: 188 GSRGLISQLLGPKFGGFLVYGSLGGKS--VPGLPTLVSLKQVYQLEHINPDTKIFGLVSN 245
G G+ S++ K G Y + PG + +K +Y E IN T++FG++ +
Sbjct: 167 GDFGVWSRVACGKLGSPFTYATFSQDREVAPGQLSFQDMKHIYHYETINAKTQLFGVIGD 226
Query: 246 PVGHSKGPILHNPAFRHTRFNGIYVPMLV--DDVKEFFRTYSGTDFAGFSVGIPHKEPAV 303
P+GHS P+LHN A R FNG+YVP+ V D + + DF G SV IPHKE +
Sbjct: 227 PIGHSLSPLLHNEAMRKIGFNGVYVPLRVARDQLTQTLADLETLDFRGLSVTIPHKEAVL 286
Query: 304 ACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALRERQGINGVASHTS 363
A + IGA NT+ R D + +NTD ++A+ +++ AL
Sbjct: 287 AKFPRCEEFVRQIGAANTLFRGS-DNQWQSFNTDYQAALDSVKLAL----------PTGD 335
Query: 364 PIAGKIFVLVGAGGAGRALAFGAKSRGARVIIFNRNYERAKALADAVSGEALHFEYLHEF 423
+ GK +L+GAGGA RA+ G G ++I +R RAK LA+ ++ + +E
Sbjct: 336 TLEGKRVLLLGAGGAARAIGMGITRAGGALVITSRTSARAKTLAEQLNCRHVTWENRGAE 395
Query: 424 FPEKGMILANASAIGMEPNSDQSPVPKEALKAYELVFDAVYTPRNTRLLREAAEVGATVV 483
+ + IL N + +GM P DQ+P + L+ +VFD +YTP NT L++EA G V
Sbjct: 396 YAD---ILINCTPVGMYPEMDQTPFQQNWLREGMIVFDTIYTPENTLLIKEAQVRGCKTV 452
Query: 484 SGVEMFIRQALGQFRLFTGGLAPEDFMRK 512
SG+EMFIRQA QF FTG A D +R+
Sbjct: 453 SGIEMFIRQAAAQFERFTGKPASLDDLRE 481
>gi|87311736|ref|ZP_01093851.1| 3-dehydroquinate dehydratase / shikimate 5-dehydrogenase precursor
[Blastopirellula marina DSM 3645]
gi|87285520|gb|EAQ77439.1| 3-dehydroquinate dehydratase / shikimate 5-dehydrogenase precursor
[Blastopirellula marina DSM 3645]
Length = 495
Score = 215 bits (548), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 150/487 (30%), Positives = 253/487 (51%), Gaps = 38/487 (7%)
Query: 34 GADLVELCIDSMEFSHISEVDKLIQHPTLPAIVSYRLKSS--RKSSDEACKNTCLQVLRR 91
G LVEL +D + + ++ +L+ P +V+ R + R + EA + VLR
Sbjct: 25 GVKLVELRLDYINGT--IKLKRLLNDRPGPVLVTCRREQDGGRWAGMEAERQ---MVLRT 79
Query: 92 ALDLDVEFVEMDYEVASDPLMSEIIYSRSNTKIIVSSYLNGGGKPTTEKLGDVIACMQAT 151
A+ ++V+++ ++A++ I TK I+S + + T + ++ M
Sbjct: 80 AIVDGADYVDIEEDIAAN------IPRYGTTKRIISYH---NFRETPADIEEIHERMCKL 130
Query: 152 GADVMKLEIAVDSITDLAPVFEMLTHCQVPLIALAVGSRGLISQLLGPKFGGFLVYGSLG 211
D++KL +S D + ++ VP IAL +G G +++LG K+G + Y +
Sbjct: 131 DPDIVKLATMANSPHDNIRMLKLAQRNNVPTIALCMGDMGTPTRILGAKYGVPITYSTYS 190
Query: 212 GKSV--PGLPTLVSLKQVYQLEHINPDTKIFGLVSNPVGHSKGPILHNPAFRHTRFNGIY 269
+ PG +++VY + IN +T+I+G++++P+GHS P LHN FR N Y
Sbjct: 191 NERTLAPGQIGYQQMREVYGYDQINAETEIYGVIADPIGHSLSPQLHNACFRDQGSNRCY 250
Query: 270 VPMLVDDVKEFFRTYSGTD-----FAGFSVGIPHKEPAVACCDEVHPLAKSIGAVNTIIR 324
+P V +E ++ D G SV IPHKE V + + + IGA NT++
Sbjct: 251 LPFRVP--REHLASFIQEDCPALEIKGLSVTIPHKETIVRMIKKPNAAVQGIGAANTVLF 308
Query: 325 RPIDGKLVGYNTDCESAISAIEDALRERQGINGVASHTSPIAGKIFVLVGAGGAGRALAF 384
+G G+N+DC++A++++ AL + +P K +++G+GG +A+A+
Sbjct: 309 D--EGGPSGFNSDCDAALASLSTALPQ--------DVANPYENKTALVLGSGGVAKAIAW 358
Query: 385 GAKSRGARVIIFNRNYERAKALADAVSGEALHFEYLHEFFPEKGMILANASAIGMEPNSD 444
G K+RG VII +R E A LA + + +E + E+ IL N + +GM PN +
Sbjct: 359 GLKNRGVDVIIASRTDENADDLAKGLGCRMVSWE---DRGLERVDILINGTPVGMHPNVN 415
Query: 445 QSPVPKEALKAYELVFDAVYTPRNTRLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGL 504
+SP+ K L+A +VFD VY P T L++EA + VV+GV+MF+RQA Q++LFTG
Sbjct: 416 ESPIDKVRLRAGMVVFDTVYNPEQTLLIKEARQRECRVVTGVDMFVRQAALQYQLFTGSE 475
Query: 505 APEDFMR 511
D MR
Sbjct: 476 PSRDLMR 482
>gi|296122090|ref|YP_003629868.1| 3-dehydroquinate dehydratase [Planctomyces limnophilus DSM 3776]
gi|296014430|gb|ADG67669.1| 3-dehydroquinate dehydratase, type I [Planctomyces limnophilus DSM
3776]
Length = 517
Score = 215 bits (547), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 152/496 (30%), Positives = 255/496 (51%), Gaps = 43/496 (8%)
Query: 18 ETTEEMQASIEQAKVE-GADLVELCIDSMEFSHISEVDKLIQHPTLPAIVSYRLKSSR-- 74
T +M + QA + GA+LVEL +D + S ++ +L+ P IV+ R + R
Sbjct: 11 RTRHQMMIAEHQALAQKGAELVELRVDYL--SRTPDMKRLLADRPTPTIVTCRRVADRGR 68
Query: 75 -KSSDEACKNTCLQVLRRALDLDVEFVEMDYEVASDPLMSEIIYSRSNTKIIVSSYLNGG 133
+ ++E + +LR A+ ++V+++ ++A I TK I+S +
Sbjct: 69 FRGTEEERQT----ILRTAILSGADYVDIEADIAPQ------IRRYGKTKRIISHH---D 115
Query: 134 GKPTTEKLGDVIACMQATGADVMKLEIAVDSITDLAPVFEMLTHCQVPLIALAVGSRGLI 193
T + L + A M AD++K+ + D + +++ QVP + +G +G++
Sbjct: 116 FDQTPDDLEEKYAQMCKLDADLVKIVTMANRAEDCVRMLKLVEGAQVPTVGFCMGEKGML 175
Query: 194 SQLLGPKFGGFLVYGSLGGKS--VPGLPTLVSLKQVYQLEHINPDTKIFGLVSNPVGHSK 251
+++L FG Y + + PG + ++++++ E I T + G++ +PV HS
Sbjct: 176 TRVLCGAFGSPFTYATFNKERELAPGQFSFDEMRKMFRYEQITRKTILLGVLGDPVAHSL 235
Query: 252 GPILHNPAFRHTRFNGIYVPMLVD--DVKEFFRTYSGTDFAGFSVGIPHKEPAVA---CC 306
P+LHN R F+G+Y+P+ V ++ E Y F G+S IPHKE + C
Sbjct: 236 SPLLHNTLMRKAGFDGVYLPLRVSASELSETLDAYEQLGFTGYSATIPHKESVLQKYPMC 295
Query: 307 DEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALRERQGINGVASHTSPIA 366
D+ ++IGA NT+ R G NTD ++A+ AI L+ + + G
Sbjct: 296 DD---FVRAIGAANTVYRDQA-GHWACSNTDYQAALDAILSGLKPGESLTG--------- 342
Query: 367 GKIFVLVGAGGAGRALAFGAKSRGARVIIFNRNYERAKALADAVSGEALHFEYLHEFFPE 426
K +L+GAGGA +A+ + A ++ +R +R++ALAD + G A+ +E F +
Sbjct: 343 -KRVLLLGAGGAAKAIGMAMQKSEAITVVASRTLKRSQALADQIGGRAITWENRGSEFAD 401
Query: 427 KGMILANASAIGMEPNSDQSPVPKEALKAYELVFDAVYTPRNTRLLREAAEVGATVVSGV 486
IL N + +GM PN ++SP P L+ LVFD +YTP T L+++A + G T V+GV
Sbjct: 402 ---ILINCTPVGMHPNLNESPFPIHWLREGMLVFDTIYTPERTLLIKDARDRGCTTVTGV 458
Query: 487 EMFIRQALGQFRLFTG 502
EMFIRQA QFRLFTG
Sbjct: 459 EMFIRQATAQFRLFTG 474
>gi|337292890|emb|CCB90890.1| Bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase,
chloroplastic [Waddlia chondrophila 2032/99]
Length = 456
Score = 209 bits (533), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 153/513 (29%), Positives = 243/513 (47%), Gaps = 71/513 (13%)
Query: 11 VCTQLECETTEEMQASIEQAKVEGADLVELCIDSMEFSHISEVDKLIQHPTLPAIVSYRL 70
VC + T E I A A+++EL +D ++ +++L+Q P I +YR
Sbjct: 3 VCVPITARTLPEALKEISFA-CSIAEMIELRLDYLDHPSPEGINELVQACEKPVIATYRK 61
Query: 71 KSSRKSSDEACKNTCLQVLRRALDLDVEFVEMDYEVASDPLMSEIIYSRSNTKIIVSSYL 130
K+ + +L+ ALD ++V+++ S PL + I S +L
Sbjct: 62 KNP------------VPLLKAALDAGADYVDVEEINTSLPL----------ERCIYSIHL 99
Query: 131 NGGGKPTTEKLGDVIACMQATGADVMKLEIAVDSITDLAPVFEMLT-HCQVPLIALAVGS 189
T L ++ M+A+GA ++K+ S D + +L + + LIA +G
Sbjct: 100 Q-----ETPPLEELYQSMKASGAAIIKIVPTARSFIDNIAILNLLKKYPEDRLIAFCMGE 154
Query: 190 RGLISQLLGPKFGGFLVYGSL--GGKSVPGLPTLVSLKQVYQLEHINPDTKIFGLVSNPV 247
+GL+S+ P +G F +G++ G KS PG P L++ +T + G++ +P+
Sbjct: 155 KGLLSRYFAPAYGSFCTFGAIAEGKKSAPGQPLATHLRKW----KAQVNTTLCGVIGDPI 210
Query: 248 GHSKGPILHNPAFRHTRFNGIYVPMLV--DDVKEFFRTYSGTDFAGFSVGIPHKEPAVAC 305
HS P +H A+ N +++P +D+ + G +V IPHKE +
Sbjct: 211 THSLSPAIHQAAYEADGLNFLFLPFHTTKEDLPKILDLMRQFPLKGLAVTIPHKESVIPM 270
Query: 306 CDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALRERQGINGVASHTSPI 365
DEV A++IGAVNTII GKL GYNTD A+ ++ R
Sbjct: 271 LDEVDVEAQAIGAVNTIINH--GGKLTGYNTDVFGAVQPLQKRTDLR------------- 315
Query: 366 AGKIFVLVGAGGAGRALAFGAKSRGARVIIFNRNYERAKALADAVSGEALHFEYLHEFFP 425
GK ++G GGA +A A+G + G+ V +F RN E+ K E L E
Sbjct: 316 -GKRVAILGNGGAAKAFAYGLQKEGSVVTLFGRNLEKLK-------------EQLME--- 358
Query: 426 EKGMILANASAIGMEPNSDQSPVPKEALKAYELVFDAVYTPRNTRLLREAAEVGATVVSG 485
IL + +GM PN+D++ VP + L LVFD VY P T+LL++A + G +SG
Sbjct: 359 --SEILIQTTPVGMAPNTDKTLVPPDFLHQNLLVFDCVYNPLKTQLLKDAEKAGCRTISG 416
Query: 486 VEMFIRQALGQFRLFTGGLAPEDFMRKLVLEQF 518
+EMF+ QA Q++ FT A E+ M+K L F
Sbjct: 417 LEMFMIQAREQYKFFTSQEANEEAMKKAALNAF 449
>gi|297621526|ref|YP_003709663.1| bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase
[Waddlia chondrophila WSU 86-1044]
gi|297376827|gb|ADI38657.1| bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase
[Waddlia chondrophila WSU 86-1044]
Length = 456
Score = 209 bits (531), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 152/513 (29%), Positives = 243/513 (47%), Gaps = 71/513 (13%)
Query: 11 VCTQLECETTEEMQASIEQAKVEGADLVELCIDSMEFSHISEVDKLIQHPTLPAIVSYRL 70
VC + T E I A A+++EL +D ++ +++L+Q P I +YR
Sbjct: 3 VCVPITARTLPEALKEISFA-CSIAEMIELRLDYLDHPSPEGINELVQACEKPVIATYRK 61
Query: 71 KSSRKSSDEACKNTCLQVLRRALDLDVEFVEMDYEVASDPLMSEIIYSRSNTKIIVSSYL 130
K+ + +L+ ALD ++V+++ S PL + I S +L
Sbjct: 62 KNP------------VPLLKAALDAGADYVDVEEINTSLPL----------ERCIYSIHL 99
Query: 131 NGGGKPTTEKLGDVIACMQATGADVMKLEIAVDSITDLAPVFEMLT-HCQVPLIALAVGS 189
T L ++ M+A+GA ++K+ S D + +L + + LIA +G
Sbjct: 100 Q-----ETPPLEELYQSMKASGAAIIKIVPTARSFIDNIAILNLLKKYPEDRLIAFCMGE 154
Query: 190 RGLISQLLGPKFGGFLVYGSL--GGKSVPGLPTLVSLKQVYQLEHINPDTKIFGLVSNPV 247
+GL+S+ P +G F +G++ G KS PG P L++ +T + G++ +P+
Sbjct: 155 KGLLSRYFAPAYGSFCTFGAIAEGKKSAPGQPLATHLRKW----KAQVNTTLCGVIGDPI 210
Query: 248 GHSKGPILHNPAFRHTRFNGIYVPMLV--DDVKEFFRTYSGTDFAGFSVGIPHKEPAVAC 305
HS P +H A+ N +++P +D+ + G +V +PHKE +
Sbjct: 211 THSLSPAIHQAAYEADGLNFLFLPFHTTKEDLPKILDLMRQFPLRGLAVTVPHKESVIPM 270
Query: 306 CDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALRERQGINGVASHTSPI 365
DEV A++IGAVNTII GKL GYNTD A+ ++ R
Sbjct: 271 LDEVDVEAQAIGAVNTIINH--GGKLTGYNTDVFGAVQPLQKRTDLR------------- 315
Query: 366 AGKIFVLVGAGGAGRALAFGAKSRGARVIIFNRNYERAKALADAVSGEALHFEYLHEFFP 425
GK ++G GGA +A A+G + G+ V +F RN E+ K E L E
Sbjct: 316 -GKRVAILGNGGAAKAFAYGLQKEGSVVTLFGRNLEKLK-------------EQLME--- 358
Query: 426 EKGMILANASAIGMEPNSDQSPVPKEALKAYELVFDAVYTPRNTRLLREAAEVGATVVSG 485
IL + +GM PN+D++ VP + L LVFD VY P T+LL++A + G +SG
Sbjct: 359 --SEILIQTTPVGMAPNTDKTLVPPDFLHQNLLVFDCVYNPLKTQLLKDAEKAGCRTISG 416
Query: 486 VEMFIRQALGQFRLFTGGLAPEDFMRKLVLEQF 518
+EMF+ QA Q++ FT A E+ M+K L F
Sbjct: 417 LEMFMIQAREQYKFFTSQEANEEAMKKAALNAF 449
>gi|449497737|ref|XP_004160503.1| PREDICTED: bifunctional 3-dehydroquinate dehydratase/shikimate
dehydrogenase, chloroplastic-like [Cucumis sativus]
Length = 213
Score = 207 bits (526), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 116/210 (55%), Positives = 151/210 (71%), Gaps = 6/210 (2%)
Query: 309 VHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALRERQGI-NGVASHTSPIAG 367
V PLA GAVN ++RR DGKL GYNTDC AISAIED L G+ N + +S +AG
Sbjct: 9 VDPLA--TGAVNFVLRRQSDGKLCGYNTDCYGAISAIEDGL---LGLHNDSFAVSSRLAG 63
Query: 368 KIFVLVGAGGAGRALAFGAKSRGARVIIFNRNYERAKALADAVSGEALHFEYLHEFFPEK 427
K+ V++GAGG G+A+A+GAK +GAR++I NR+++RA+ LAD V G+++ L F PE
Sbjct: 64 KLVVVIGAGGVGKAVAYGAKQKGARIVIANRSFDRARELADRVGGQSVSLADLENFHPED 123
Query: 428 GMILANASAIGMEPNSDQSPVPKEALKAYELVFDAVYTPRNTRLLREAAEVGATVVSGVE 487
GMIL NA+ IGM+P D++P+PK ALK Y LVFDAVYTPR TRLLREA E GA +V G+E
Sbjct: 124 GMILVNATPIGMQPKVDETPIPKHALKRYSLVFDAVYTPRMTRLLREAEESGAAIVPGLE 183
Query: 488 MFIRQALGQFRLFTGGLAPEDFMRKLVLEQ 517
MF RQA Q+ FTG AP++ +RK + +
Sbjct: 184 MFTRQAYEQYEGFTGLPAPKERIRKFLADN 213
>gi|390986545|gb|AFM35792.1| hypothetical protein, partial [Oryza eichingeri]
Length = 156
Score = 203 bits (516), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 99/157 (63%), Positives = 114/157 (72%), Gaps = 3/157 (1%)
Query: 196 LLGPKFGGFLVYGSL--GGKSVPGLPTLVSLKQVYQLEHINPDTKIFGLVSNPVGHSKGP 253
+L PKFGGFL +GSL G +S P PT L VY + I PDTK++G++ PVGHSK P
Sbjct: 1 VLCPKFGGFLTFGSLEKGKESAPAQPTATDLINVYNIRQIGPDTKVYGIIGKPVGHSKSP 60
Query: 254 ILHNPAFRHTRFNGIYVPMLVDDVKEFFRTYSGTDFAGFSVGIPHKEPAVACCDEVHPLA 313
ILHN AFR N +YVP LVDD+ F TYS T+FAGFS IPHKE AV CCDEV P+A
Sbjct: 61 ILHNEAFRSVGLNAVYVPFLVDDLSNFLNTYSSTEFAGFSCTIPHKEAAVRCCDEVDPIA 120
Query: 314 KSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALR 350
K IGAVNTIIR+P +GKLVGYNTD AISAIED +R
Sbjct: 121 KDIGAVNTIIRKP-NGKLVGYNTDYVGAISAIEDGIR 156
>gi|168699805|ref|ZP_02732082.1| 3-dehydroquinate dehydratase / shikimate 5-dehydrogenase precursor
[Gemmata obscuriglobus UQM 2246]
Length = 520
Score = 197 bits (502), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 150/500 (30%), Positives = 241/500 (48%), Gaps = 35/500 (7%)
Query: 25 ASIEQAKVEGADLVELCIDSMEFSHISEVDKLIQHPTLPAIVSYRLKSS--RKSSDEACK 82
A +++A GA +EL +D + + + +L P + + R + R S +E +
Sbjct: 20 AELQEAVKRGAKFIELRLDFL--AKAVDFKRLTPLKQCPWVATLRRPADGGRFSGNEQER 77
Query: 83 NTCLQVLRRALDLDV-EFVEMDYEVASDPLMSEIIYSRSNTKIIVSSYLNGGGKPTTEKL 141
+ ++R+A+ E+V+++ ++A + K IVS Y N P L
Sbjct: 78 ---MMIIRQAIASGAFEWVDLETDIAG------AVPRYGKVKRIVS-YHNTAETPAN--L 125
Query: 142 GDVIACMQATGADVMKLEIAVDSITDLAPVFEMLTHCQVPLIALAVGSRGLISQLLGPKF 201
D+ A M ADV K+ +A S D+A V + P +A +G G ++ L KF
Sbjct: 126 DDIFADMLKQDADVYKIAVAAQSPADVAKVLHLQRTAPKPTVAFCMGDIGQPTRFLALKF 185
Query: 202 GGFLVYGSLGGKS--VPGLPTLVSLKQVYQLEHINPDTKIFGLVSNPVGHSKGPILHNPA 259
G +Y + + PGLP+ + Y ++ I DT+IFG++ +PVGHS P+LHN
Sbjct: 186 GAPWIYAAFNKERGIAPGLPSFDEFRTTYPVQEITADTQIFGVLGDPVGHSLSPLLHNHM 245
Query: 260 FRHTRFNGIYVPMLVD--DVKEFFRTYSGTDFAGFSVGIPHKEPAVACCDEVHPLAKSIG 317
+R N +Y+P V + + Y G+SV IPHKE A A + P G
Sbjct: 246 YRKLGVNALYLPFQVPRGQLSQALEVYGQIPVRGYSVTIPHKEAAAALAKQAEPTVPFTG 305
Query: 318 AVNTIIRRPIDGKLVGYNTDCESAISAIEDALRERQGINGVASHTSPIA--GKIFVLVGA 375
+ NT++RR DG NTD + + +++ L ++ S P ++ VL+
Sbjct: 306 SANTLVRRD-DGAFAAANTDLGAILDSLKAHLAQK-------SKDGPFVQLSQLSVLILG 357
Query: 376 GGAGRALAFGAKSR-GARVIIFNRNYERAKALADAVSGEALHFEYLHEFFPEKGMILANA 434
G A R GA++ I R Y+RA+ LA+ V +A+ + H + +L N
Sbjct: 358 AGGAARSAAYGMHREGAQITISARTYDRAQKLAEDVKCKAVDWHARHNVNFD---VLINC 414
Query: 435 SAIGMEPNSDQSPVPKEALKAYELVFDAVYTPRNTRLLREAAEVGATVVSGVEMFIRQAL 494
+ +GM PN D+SP LK +VFD +Y P T L+REA G ++GV+MF+RQA
Sbjct: 415 TPVGMHPNVDESPCHFSVLKPGAIVFDTIYRPETTLLIREARARGCDTITGVDMFVRQAA 474
Query: 495 GQFRLFTGGLAPEDFMRKLV 514
Q LFTG + + MR ++
Sbjct: 475 RQIELFTGHVPDTETMRTIM 494
>gi|255291825|dbj|BAH89264.1| putative 3-dehydroquinate dehydratase/shikimate 5-dehydrogenase
fragment [Diospyros kaki]
Length = 188
Score = 197 bits (500), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 93/169 (55%), Positives = 120/169 (71%), Gaps = 2/169 (1%)
Query: 181 PLIALAVGSRGLISQLLGPKFGGFLVYGSL--GGKSVPGLPTLVSLKQVYQLEHINPDTK 238
P I LA+G RGLIS++L KFGGFL +G+L G S PG PTL L +Y I PDTK
Sbjct: 1 PTIGLAMGERGLISRILCAKFGGFLTFGALESGIHSAPGQPTLRDLLDLYNFRQIGPDTK 60
Query: 239 IFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLVDDVKEFFRTYSGTDFAGFSVGIPH 298
+ G++ NP+GHSK P L+N AF+ FNGIY+P+LVD+V F TYS DF G+S IPH
Sbjct: 61 VHGVIGNPIGHSKSPHLYNTAFKKAAFNGIYLPLLVDNVANFLNTYSSPDFTGYSYTIPH 120
Query: 299 KEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIED 347
K + CCDEV P+AK+IGA++ +I++P DGKL+GYN D AI+AIE+
Sbjct: 121 KMAGLECCDEVDPIAKAIGAISCVIKKPSDGKLIGYNVDYLGAIAAIEE 169
>gi|320106134|ref|YP_004181724.1| shikimate 5-dehydrogenase [Terriglobus saanensis SP1PR4]
gi|319924655|gb|ADV81730.1| shikimate 5-dehydrogenase [Terriglobus saanensis SP1PR4]
Length = 706
Score = 194 bits (494), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 132/422 (31%), Positives = 215/422 (50%), Gaps = 26/422 (6%)
Query: 98 EFVEMDYEVASDPLMSEIIYSRSNTKIIVSSYLNGGGKPTTEKLGDVIACMQATGADVMK 157
+ V+M+ E A + + R +++ S+ + G P + + D +A D K
Sbjct: 109 QIVDMEVETAEALKATALDKLRDAGCVVMLSFHDFKGTPDLDAVYDRMAKF---SPDFYK 165
Query: 158 LEIAVDSITDLAPVFEML-THCQ-VPLIALAVGSRGLISQLLGPKFGGFLVYG--SLGGK 213
+ S+ D V +L H + ++ALA+G+ G+++++LGP+FG +G ++G +
Sbjct: 166 IVPTAKSLPDNLKVTALLEKHAEDANVVALAMGNFGVLTRILGPRFGSVFTFGAATVGEE 225
Query: 214 SVPGLPTLVSLKQVYQLEHINPDTKIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPML 273
+ PG +L ++Y+++ I T+I+G+ +PV S P++ N AFR N +YV +
Sbjct: 226 TAPGQVAARTLTELYRMDGIEASTRIYGVAGSPVTSSLSPLMINTAFRRETVNAVYVALE 285
Query: 274 VDDVKEFFRTYSGTDFAGFSVGIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVG 333
DVK+ + G SV +P K +A ++ PL+ IGA NT++R DGKL G
Sbjct: 286 TGDVKDLLKVMEKLPIHGVSVTMPLKTDILAHLEKTDPLSAKIGACNTVVRAQ-DGKLYG 344
Query: 334 YNTDCESAISAIEDALRERQGINGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGARV 393
+NTD GI G P+ G +++GAGG RA FG K +GA V
Sbjct: 345 FNTDV--------------GGIVGPLERRVPLRGAKVLVLGAGGVARAAVFGLKDKGAEV 390
Query: 394 IIFNRNYERAKALADAVSGEALHFEYLHEFFPEKGMILANASAIGMEPNSDQSPVPKEAL 453
I NR E+A+ LA + + + L + + ++ NA+ GM +P+ E L
Sbjct: 391 SILNRTPEKAQKLARQAGAKVMRRDQLAK---TRFDVVINATPYGMLGQKIAAPISAEEL 447
Query: 454 KAYELVFDAVYTPRNTRLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRKL 513
L+FD VY P T L+R A VV GVEMF++Q QF ++TG AP++ M ++
Sbjct: 448 NT-GLLFDLVYNPIETPLVRLARSKNIAVVLGVEMFVQQGARQFEIWTGKPAPQEEMLRV 506
Query: 514 VL 515
VL
Sbjct: 507 VL 508
>gi|242085730|ref|XP_002443290.1| hypothetical protein SORBIDRAFT_08g016980 [Sorghum bicolor]
gi|241943983|gb|EES17128.1| hypothetical protein SORBIDRAFT_08g016980 [Sorghum bicolor]
Length = 164
Score = 192 bits (487), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 90/162 (55%), Positives = 117/162 (72%), Gaps = 3/162 (1%)
Query: 190 RGLISQLLGPKFGGFLVYGSL--GGKSVPGLPTLVSLKQVYQLEHINPDTKIFGLVSNPV 247
+G IS++L K+GG+L + SL G +S PG PT+ L Y++ I PDTK+FG++ NPV
Sbjct: 4 QGFISRILCAKYGGYLTFASLEKGKESAPGQPTVSDLINKYKIRQIGPDTKVFGIIGNPV 63
Query: 248 GHSKGPILHNPAFRHTRFNGIYVPMLVDDVKEFFRTYSGTDFAGFSVGIPHKEPAVACCD 307
HSK PI+ N AFR F+ +++P L DD+ EF T+S D+AGFS +PHKE A+ CCD
Sbjct: 64 NHSKSPIVQNQAFRSVGFDAVFLPFLSDDLVEFLSTFSAPDYAGFSCTMPHKETALRCCD 123
Query: 308 EVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDAL 349
+V P+A+ IGA+NTIIRRP DGKLVGYNTD AISAIED L
Sbjct: 124 DVDPIARDIGAINTIIRRP-DGKLVGYNTDYSGAISAIEDGL 164
>gi|384247564|gb|EIE21050.1| aldolase [Coccomyxa subellipsoidea C-169]
Length = 528
Score = 191 bits (486), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 180/535 (33%), Positives = 273/535 (51%), Gaps = 53/535 (9%)
Query: 18 ETTEEMQASIEQAKVEGADLVELCIDSMEFSHISEVDKLIQHPTL------------PAI 65
+T + A I +A GADLVEL +D ++++D L P L PA+
Sbjct: 7 DTVDGALAEIGEAAHLGADLVELRLD-----FLTDIDLLDPTPMLERMLGACETALLPAL 61
Query: 66 VSYR--LKSSRKSSDEACKNTCLQVLRRALDLDVEFVEMDYEVASDPLMSEIIYSRSNTK 123
V++R + + S + + L VL+ A +++++++ A SE S+T
Sbjct: 62 VTFRPMWEGGQYSGPDLPR---LAVLKAAAGAGAQYIDVEHLAAGSFFSSEGEVP-SSTA 117
Query: 124 IIVSSYLNGGGKPTTEKLGDVIACMQATGADVMKLEIAVDSITDLAPVFEMLTHCQVP-- 181
+I+S + N P+ E L ++ M GAD+ K+ + D A + + + P
Sbjct: 118 VIISHH-NYSETPSDEALEALVEDMFDEGADIAKIATTAKCVEDSARMLALPG--KAPGG 174
Query: 182 --LIALAVGSRGLISQLLGPKFGGFLVYGSLGGK--SVPGLPTLVSLKQVYQLEHINPDT 237
+IALA+G GL ++LL PKFGG+L++G+L + S G T+ L+++Y++ DT
Sbjct: 175 WLVIALAMGEAGLPTRLLAPKFGGYLIFGALSAEESSATGQSTIAELRRLYRVHSQTEDT 234
Query: 238 KIFGLVSNPVGHSKGP----ILHNPAFRHTRFNGIYVPMLVDDVKEFFRTYSGTDFAGFS 293
K+FG+V +P +GP +LHN A + IYVP+ DD++ + F+GF
Sbjct: 235 KVFGIVDSPAAAVRGPPWSAVLHNAALAAAGMDTIYVPLCADDLRSCLDAFPC--FSGFC 292
Query: 294 VGIPHKE-PAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALRER 352
+ PH+ A+ C DE A IGA +T+ +R DG+L YNT+ +A+SA+E AL
Sbjct: 293 LTAPHQVLAALECADEADRSAARIGAADTL-QRQTDGRLQAYNTEWAAAVSALEAALGGA 351
Query: 353 QGINGVASH-TSPIAGKIFVLVGAGGAGRALAFGAKSRGARVIIFNRNY-------ERAK 404
G S + GK V+VGAGGAGRALAFG +GARVI+ +R + A
Sbjct: 352 WCNAGSPQKGESALRGKCVVVVGAGGAGRALAFGVVEKGARVIVCDRQVTSSALQQQMAG 411
Query: 405 ALADAVSGEALHFEYLHEFFPE-KGMILANASAIGMEPNSDQSPVPKEALKAYELVFDAV 463
LA ++ A ++ G +L N+ ME +S V AL Y +V DA
Sbjct: 412 ILAISLGSGASAVKHADVAAGRVAGDVLINSMPACME----ESLVSAAALSCYRVVLDAT 467
Query: 464 YTPRNTRLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRKLVLEQF 518
T TRLLREA E+G VSG+E+ + QA QF L TG AP MR+ LE+
Sbjct: 468 CTSLQTRLLREAQELGCATVSGLEISVTQAAQQFELLTGAPAPVALMRQATLERM 522
>gi|225873819|ref|YP_002755278.1| 3-dehydroquinate dehydratase [Acidobacterium capsulatum ATCC 51196]
gi|225794474|gb|ACO34564.1| 3-dehydroquinate dehydratase, type I domain/shikimate
5-dehydrogenase domain protein [Acidobacterium
capsulatum ATCC 51196]
Length = 800
Score = 190 bits (483), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 134/437 (30%), Positives = 224/437 (51%), Gaps = 32/437 (7%)
Query: 86 LQVLRRALDLDVEFVEMDYEVASDPLMSEIIYSRSNTKIIVSSYLNGGGKPTTEKLGDVI 145
+Q+L +A+ + ++++ E A +E+ RS ++ SY + T L +
Sbjct: 153 IQILEKAIAAGCDLIDIEIETAEKLKAAELARIRSLGAALIISYHDFKA---TRDLDRMF 209
Query: 146 ACMQATGADVMKLEIAVDSITDLAPVFEMLTHCQ-----VPLIALAVGSRGLISQLLGPK 200
+Q D +K+ V + T LA M+ + ++ + +G +GLIS++LG +
Sbjct: 210 EKIQRYSPDFVKM---VSTATCLADNLAMMHFLERSSDAANVVGICMGEQGLISRVLGVR 266
Query: 201 FGGFLVYGSL--GGKSVPGLPTLVSLKQVYQLEHINPDTKIFGLVSNPVGHSKGPILHNP 258
G + S G ++ PG +L ++++++ ++P T+++G+V NPV HS P++HN
Sbjct: 267 AGSVFTFASAQAGEETGPGQIAARTLHEIFRIDQVSPATRVYGVVGNPVMHSLSPLIHNL 326
Query: 259 AFRHTRFNGIYVPMLVDDVKEFFRTYSGTDFAGFSVGIPHKEPAVACCDEVHPLAKSIGA 318
AFR N +++P+ + + + R G +V +P K + L++ IGA
Sbjct: 327 AFRRETVNAVFLPLQANTLSDVLRLVKEVPLHGLAVTMPFKGEILKHLTNTDALSEKIGA 386
Query: 319 VNTIIRRPIDGKLVGYNTDCESAISAIEDALRERQGINGVASHTSPIAGKIFVLVGAGGA 378
NT++ R +DG L G+NTD + + +E L P+ +++GAGGA
Sbjct: 387 CNTVV-RALDGNLYGFNTDVAAVVRPLERRL--------------PLRDARVLVIGAGGA 431
Query: 379 GRALAFGAKSRGARVIIFNRNYERAKALADAVSGEALHFEYLHEFFPEKGMILANASAIG 438
RA FG K +GA V I NR E A+ LA + +E L + + ++ NA+ IG
Sbjct: 432 ARAAVFGLKDKGADVTIVNRTPETAQKLARQAKARTIRYEQLAKASFD---VILNATPIG 488
Query: 439 MEPNSDQSPVPKEALKAYELVFDAVYTPRNTRLLREAAEVGATVVSGVEMFIRQALGQFR 498
M + QS + + L A LVFD VY P T LLR A E G V++GVEMF++Q QF
Sbjct: 489 MHGHKQQSWLKPDQLNA-RLVFDMVYNPIETPLLRMAREKGLPVITGVEMFVQQGARQFE 547
Query: 499 LFTGGLAPEDFMRKLVL 515
++TG APED M + V+
Sbjct: 548 IWTGKPAPEDEMLRAVV 564
>gi|85859660|ref|YP_461862.1| shikimate 5-dehydrogenase [Syntrophus aciditrophicus SB]
gi|85722751|gb|ABC77694.1| shikimate 5-dehydrogenase [Syntrophus aciditrophicus SB]
Length = 292
Score = 190 bits (483), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 110/280 (39%), Positives = 150/280 (53%), Gaps = 19/280 (6%)
Query: 239 IFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLVDDVKEFFRTYSGTDFAGFSVGIPH 298
+ L+ +PVGHS P++H+ A +H G Y V D+ + F G SV IP+
Sbjct: 24 LLALLGHPVGHSLSPLMHSTALKHLHLEGRYEAWDVSDLSQAMVDLKRKGFRGASVTIPY 83
Query: 299 KEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALRERQGINGV 358
K ++ D++ A+SIGAVNT+IRR DG VG NTD E I A+
Sbjct: 84 KRDIMSFLDDIDEQARSIGAVNTLIRRG-DG-FVGANTDWEGLIRALRSV---------- 131
Query: 359 ASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGARVIIFNRNYERAKALADAVSGEALHFE 418
+ I G+ FV++GAGG RA +G G ++ NR +R + LAD +
Sbjct: 132 ----TSIRGRRFVVLGAGGTARAALYGILGEGGGAVVVNRTEKRGRELADDFGCPSYP-- 185
Query: 419 YLHEFFPEKGMILANASAIGMEPNSDQSPVPKEALKAYELVFDAVYTPRNTRLLREAAEV 478
L E +G +L N + +GM PN++ SPVP L + LV D +YTP TRLLREA
Sbjct: 186 -LTEIDTLQGDVLINTTPVGMTPNTEVSPVPSAVLSRFSLVADVIYTPLRTRLLREAERA 244
Query: 479 GATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRKLVLEQF 518
G TV+SGVEMF+ Q QFRL+TG P D MR++V Q
Sbjct: 245 GCTVLSGVEMFVEQGAAQFRLWTGLEPPVDLMRQVVRNQL 284
>gi|322436187|ref|YP_004218399.1| shikimate 5-dehydrogenase [Granulicella tundricola MP5ACTX9]
gi|321163914|gb|ADW69619.1| shikimate 5-dehydrogenase [Granulicella tundricola MP5ACTX9]
Length = 571
Score = 190 bits (482), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 128/438 (29%), Positives = 220/438 (50%), Gaps = 28/438 (6%)
Query: 86 LQVLRRALDLDVEFVEMDYEVASDPLMSEIIYSRSNTKIIVSSYLNGGGKPTTEKLGDVI 145
L++L A + + V+++ E A + I R+ + ++ S+ + P +K+ I
Sbjct: 92 LEILVEAANSGFQIVDLELESAEALKSAGIDKIRATSAGLIVSWHDFEKTPDLDKVYARI 151
Query: 146 ACMQATGADVMKLEIAVDSITDLAPVFEMLTHC--QVPLIALAVGSRGLISQLLGPKFGG 203
A + D +K+ +TD + + + ++ + +G G+IS++LG + G
Sbjct: 152 APFEP---DFVKIVPTAQCLTDNVKLMRFIERMSDEASIVGVCMGDSGIISRVLGVRAGS 208
Query: 204 FLVYG--SLGGKSVPGLPTLVSLKQVYQLEHINPDTKIFGLVSNPVGHSKGPILHNPAFR 261
+ ++G ++ PG +L + Y++ ++ TK++G+ +PV S P++ N AFR
Sbjct: 209 TFTFAAATVGEETAPGQILARTLLETYRIAEVDAATKVYGVAGDPVNKSLSPLMMNTAFR 268
Query: 262 HTRFNGIYVPMLVDDVKEFFRTYSGTDFAGFSVGIPHKEPAVACCDEVHPLAKSIGAVNT 321
N +Y+ + DV + + G S+ +PHK+ +A PL+ IGA NT
Sbjct: 269 RETVNAVYLALQATDVTDLVKLIQEIPIQGVSITMPHKQSIMAHLAHTDPLSAKIGACNT 328
Query: 322 IIRRPID----GKLVGYNTDCESAISAIEDALRERQGINGVASHTSPIAGKIFVLVGAGG 377
++R P KL G+NTD + I L++R + G K VL GAGG
Sbjct: 329 VLRVPPSAGEPAKLYGFNTD----VQGILIPLQKRIELKG---------AKALVL-GAGG 374
Query: 378 AGRALAFGAKSRGARVIIFNRNYERAKALADAVSGEALHFEYLHEFFPEKGMILANASAI 437
+ RA F + +GA V I NR E A LA + + E L + + ++ NA+ +
Sbjct: 375 SARAAVFALRDKGAEVFILNRTLETAAKLAKQSGAKVIKREALLKSTFD---VIINATPV 431
Query: 438 GMEPNSDQSPVPKEALKAYELVFDAVYTPRNTRLLREAAEVGATVVSGVEMFIRQALGQF 497
GM S + + LK +LVFD VY P +T LL++A +G +V++GVEMF++Q QF
Sbjct: 432 GMSGQSVEPILTAAELKTTKLVFDLVYNPVDTPLLKQARSLGLSVITGVEMFVQQGARQF 491
Query: 498 RLFTGGLAPEDFMRKLVL 515
++TG APED M K+V+
Sbjct: 492 EIWTGKPAPEDEMLKVVI 509
>gi|116626199|ref|YP_828355.1| shikimate dehydrogenase [Candidatus Solibacter usitatus Ellin6076]
gi|116229361|gb|ABJ88070.1| shikimate dehydrogenase / 3-dehydroquinate dehydratase [Candidatus
Solibacter usitatus Ellin6076]
Length = 509
Score = 188 bits (478), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 136/429 (31%), Positives = 218/429 (50%), Gaps = 36/429 (8%)
Query: 92 ALDLDVEFVEMDYEVASDPLMSEIIYSRSNTKIIVSSYLNGGGKPTTEKLGDVIACMQAT 151
A+D+++E E +A D L R T++IVS Y N P + + + + +QA
Sbjct: 100 AIDVEIETAE----IAQDRLNQ----FRGRTQVIVS-YHNFEATPPMDTVVNRVMKVQAD 150
Query: 152 GADVMKLEIAVDSITDLAPVFEMLTHCQVPLIALAVGSRGLISQLLGPKFGGFLVYGS-- 209
++ + V + LT +V I LA+G G +++L P FGG Y +
Sbjct: 151 AYKIVSTARKPSDNVRVLAVAKALTKHRV--IVLAMGELGFPTRVLSPVFGGVFTYAAPI 208
Query: 210 LGGKSVPGLPTLVSLKQVYQLEHINPDTKIFGLVSNPVGHSKGPILHNPAFRHTRFNGIY 269
+ G + L+ +Y++E + KI+G++++P+ HS P +HN AF+ R + +Y
Sbjct: 209 YAEGTAAGQVSARYLRHLYRVEKLGKSAKIYGVIADPIRHSISPAVHNRAFQSRRVDAVY 268
Query: 270 VPMLVDD--VKEFFRTYSGTDFAGFSVGIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPI 327
+P LV +++FF + +GFSV IPHK+ + D V PLA+ IGAVNT+ R+
Sbjct: 269 LPFLVAPACLRDFFSLAAKLPLSGFSVTIPHKQKIIRYLDIVDPLARRIGAVNTVWRKA- 327
Query: 328 DGKLVGYNTDCESAISAIEDALRERQGINGVASHTSPIAGKIFVLVGAGGAGRALAFGAK 387
GK G NTD G+ G S I+ ++VG GGA R+ A
Sbjct: 328 -GKWRGTNTDA--------------AGVTGPLSRLLKISKASVLIVGNGGAARSAACALS 372
Query: 388 SRGARVIIFNRNYERAKALADAVSGEALHFEYLHEFFPEKGMILANASAIGMEPNSDQSP 447
GA++ + RN +R +AL+ E+L E L + + +A+ +GM P+ ++
Sbjct: 373 DAGAKISLVGRNPDRVRALSKICGAESLLREQLDSRHFDA---VVHATPLGMFPHVNECF 429
Query: 448 VPKEALKAYELVFDAVYTPRNTRLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPE 507
++ + A ++VFD VY P T L++ A E G VV G++MFI QA+ QF ++TG AP
Sbjct: 430 F-EDKIPA-DIVFDMVYNPLETVLVQRAKEQGKIVVPGLDMFIEQAVRQFEIWTGETAPR 487
Query: 508 DFMRKLVLE 516
M K LE
Sbjct: 488 PVMLKAALE 496
>gi|94263740|ref|ZP_01287547.1| Quinate/Shikimate 5-dehydrogenase [delta proteobacterium MLMS-1]
gi|93455840|gb|EAT06003.1| Quinate/Shikimate 5-dehydrogenase [delta proteobacterium MLMS-1]
Length = 273
Score = 188 bits (478), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 107/283 (37%), Positives = 157/283 (55%), Gaps = 19/283 (6%)
Query: 233 INPDTKIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLVDDVKEFFRTYSGTDFAGF 292
I+ T+++G++ NPV HS P++HN AF N Y+P D + AG
Sbjct: 4 IDGQTEVYGIIGNPVRHSLSPLIHNAAFAACGLNKAYLPFPALDAAAAVAALRALEIAGV 63
Query: 293 SVGIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALRER 352
SV IPHK+ +A D++ P+A +IGAVNTI+R+ DG+L GYNTD A A+E L
Sbjct: 64 SVTIPHKQAVMAALDDIDPVAAAIGAVNTIVRQ--DGRLHGYNTDWLGANRALEAELA-- 119
Query: 353 QGINGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGARVIIFNRNYERAKALADAVSG 412
+AG +++GAGG+ RA+ FG K GAR+ + +R E + LA +
Sbjct: 120 ------------LAGASILVLGAGGSARAIGFGLKEAGARLTLASRTPESGRQLAAQLGC 167
Query: 413 EALHFEYLHEFFPEKGMILANASAIGMEPNSDQSPVPKEALKAYELVFDAVYTPRNTRLL 472
L L E + L NA+++GM P +DQSP+P AL + +V D VY+P T+LL
Sbjct: 168 PWLP---LAEAGDRQADALVNATSVGMSPAADQSPLPAAALGNFPVVMDIVYSPLATKLL 224
Query: 473 REAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRKLVL 515
+EA G + G++M + Q QF L+TG AP + MR+ +L
Sbjct: 225 QEARAAGCRTIDGLQMLLHQGAAQFELWTGQQAPLEVMRESML 267
>gi|325971052|ref|YP_004247243.1| 3-dehydroquinate dehydratase [Sphaerochaeta globus str. Buddy]
gi|324026290|gb|ADY13049.1| 3-dehydroquinate dehydratase [Sphaerochaeta globus str. Buddy]
Length = 494
Score = 188 bits (477), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 142/514 (27%), Positives = 242/514 (47%), Gaps = 42/514 (8%)
Query: 10 LVCTQLECETTEEMQASIEQAKVEGADLVELCIDSMEFSHISEVDKLIQHPT---LPAIV 66
++C L T EE +A +E+ + + L EL +D + H E P+ +P I+
Sbjct: 1 MLCLTLTGSTLEENRALVERNR-KWISLAELRLD---YLHPDEQKIASSFPSTVDVPVIL 56
Query: 67 SYRLKSSRKSSDEACKNTCLQVLRRALDLDVEFVEMDYEVAS------DPLMSEIIYSRS 120
+ R +SS S + LQ+L A D +V+++ +V DPL + +
Sbjct: 57 TLR-RSSDGGSCTLSEKQRLQLLYEAAKGDFAYVDIEDDVKKTDLKFKDPLFEQKVDLEQ 115
Query: 121 NTK----IIVSSYLNGGGKPTTEKLGDVIACMQATGADVMKLEIAVDSITDLAPVFEM-- 174
+ K I+ SY N P + I+ + A G D+ K+ + S+ D+ +F +
Sbjct: 116 SLKQRHIKIIRSYHNFECVPA--DIFGRISKLAAKG-DIPKVAVTPKSMMDVITLFRVEQ 172
Query: 175 -LTHCQVPLIALAVGSRGLISQLLGPKFGGFLVYGSLGGKSVPGLPTLVSLKQVYQLEHI 233
L + + ++ + +G G+ +++L K G FL + S ++ PG + ++ +Y+ + +
Sbjct: 173 ELANLKEKIV-IGMGEYGICTRILYKKCGSFLSFCS-DSQAAPGHLSAQTMSTLYRADKL 230
Query: 234 NPDTKIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLVDDVKEFFRTYSGTDFAGFS 293
+ T IFG++ NPV H+ P +HNP F R+N +YVP LVD V+ FF+ GFS
Sbjct: 231 DEKTHIFGIIGNPVYHTASPKIHNPGFEAIRYNAVYVPFLVDSVRAFFKLAEMLQIHGFS 290
Query: 294 VGIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALRERQ 353
V +PHK + K IG+ NT++R I G NTD ++ I + L + +
Sbjct: 291 VTVPHKRSVQPYLGRITREVKQIGSCNTVVR--IQNMWKGTNTDYYGFLAPISEQLGKGE 348
Query: 354 GINGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGARVIIFNRNYERAKALADAVSGE 413
N ++VGAGGA RA+ + + G +V I NR+ E A+ LA
Sbjct: 349 IKNA-------------LVVGAGGAARAVVWALHNHGVKVTILNRSMEHARTLASETMST 395
Query: 414 ALHFEYLHEFFPEKGMILANASAIGMEPNSDQSPVPKEALKAYELVFDAVYTPRNTRLLR 473
E H + ++ +++GM ++ +P E+ ++ VY P+ T L+
Sbjct: 396 FDTLENAH-LYNGNCELVVQTTSVGMGNLGNEECIPSFNFTGKEIAYELVYNPKETLFLK 454
Query: 474 EAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPE 507
A E G T++ G +M + Q QF FTG P
Sbjct: 455 RAMEAGCTIIGGSQMLMEQGKLQFEAFTGYHYPH 488
>gi|94266091|ref|ZP_01289808.1| Quinate/Shikimate 5-dehydrogenase [delta proteobacterium MLMS-1]
gi|93453336|gb|EAT03770.1| Quinate/Shikimate 5-dehydrogenase [delta proteobacterium MLMS-1]
Length = 273
Score = 187 bits (474), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 107/283 (37%), Positives = 156/283 (55%), Gaps = 19/283 (6%)
Query: 233 INPDTKIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLVDDVKEFFRTYSGTDFAGF 292
I+ T+++G++ NPV HS P++HN AF N Y+P D + AG
Sbjct: 4 IDGQTEVYGIIGNPVRHSLSPLIHNAAFAACGLNKAYLPFPALDAAAAVAALRALEIAGV 63
Query: 293 SVGIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALRER 352
SV IPHK+ +A D++ P+A +IGAVNTI+R+ DG+L GYNTD A A+E L
Sbjct: 64 SVTIPHKQAVMAALDDIDPVAAAIGAVNTIVRQ--DGRLHGYNTDWLGANRALEAELA-- 119
Query: 353 QGINGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGARVIIFNRNYERAKALADAVSG 412
+AG +++GAGG+ RA+ FG K GAR+ + +R E + LA +
Sbjct: 120 ------------LAGASILVLGAGGSARAIGFGLKEAGARLTLASRTPESGRQLAAQLGC 167
Query: 413 EALHFEYLHEFFPEKGMILANASAIGMEPNSDQSPVPKEALKAYELVFDAVYTPRNTRLL 472
L L E + L NA+++GM P +DQSP+P AL + +V D VY+P TRLL
Sbjct: 168 PWLP---LAEAGDRQADALVNATSVGMSPAADQSPLPAAALGNFPVVMDIVYSPLATRLL 224
Query: 473 REAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRKLVL 515
+EA G + G++M + Q QF L+T AP + MR+ +L
Sbjct: 225 QEARAAGCRTIDGLQMLLHQGAAQFELWTDQQAPLEVMRESML 267
>gi|218779608|ref|YP_002430926.1| shikimate 5-dehydrogenase [Desulfatibacillum alkenivorans AK-01]
gi|218760992|gb|ACL03458.1| shikimate 5-dehydrogenase [Desulfatibacillum alkenivorans AK-01]
Length = 274
Score = 186 bits (473), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 105/283 (37%), Positives = 147/283 (51%), Gaps = 19/283 (6%)
Query: 232 HINPDTKIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLVDDVKEFFRTYSGTDFAG 291
IN T+++ + +PV HS P +HN AF H N Y+ V DV+ R D G
Sbjct: 4 EINSLTRLYAVFGDPVAHSLSPAMHNRAFTHIGENAAYMAFRVKDVQGAVRAIRAFDMGG 63
Query: 292 FSVGIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALRE 351
SV IPHK + DEV A+++GAVNTI+ G+L+G N+DC A+ AI++
Sbjct: 64 ASVTIPHKISVMEHLDEVDETARAMGAVNTIVND--QGRLIGKNSDCLGAVKAIQE---- 117
Query: 352 RQGINGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGARVIIFNRNYERAKALADAVS 411
+P+ GK V++GAGGA RA+ +G K GARV I NR E+ LA+ +
Sbjct: 118 ----------KTPVKGKDVVVIGAGGAARAVIYGLKQEGARVTIVNRTMEKGAQLAEEL- 166
Query: 412 GEALHFEYLHEFFPEKGMILANASAIGMEPNSDQSPVPKEALKAYELVFDAVYTPRNTRL 471
+ F+ + + I NA+++GM PN SP P L D VY P TR
Sbjct: 167 --GVDFQPMEDLGKLDCRIAVNATSVGMVPNVQDSPAPASLFNKEMLAMDIVYRPLLTRF 224
Query: 472 LREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRKLV 514
L +A + G T+V G+ MF+ Q QF +TG AP MR+ V
Sbjct: 225 LSDARDAGCTIVDGIAMFVYQGASQFEWWTGKEAPVAQMRETV 267
>gi|386346035|ref|YP_006044284.1| 3-dehydroquinate dehydratase [Spirochaeta thermophila DSM 6578]
gi|339411002|gb|AEJ60567.1| 3-dehydroquinate dehydratase [Spirochaeta thermophila DSM 6578]
Length = 491
Score = 186 bits (473), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 154/511 (30%), Positives = 233/511 (45%), Gaps = 54/511 (10%)
Query: 11 VCTQLECETTEEMQASIEQAKVEGADLVELCIDSMEFSHISEVDKLIQHPTLPAIVSYR- 69
VC L T EE + + + + E DLVE+ D M+ S + + LPAI++ R
Sbjct: 5 VCLSLTGRTKEEAEEQLARWR-EKVDLVEVRADCMDESAWEGLGEWASGLGLPAILTLRS 63
Query: 70 ------LKSSRKSSDEACKNTCLQVLRRALDLDVEFVEMDYEVASDPLMSEIIYSRSNTK 123
+ + DEA Q +D++ A+D L+ E+ R
Sbjct: 64 DRDGGFFEGTEDVHDEALGELVRQGGWAYVDVEA--------WAADWLVDEV--RRRGMH 113
Query: 124 IIVSSYLNGGGKPTTEK---------LGDVIACMQATGADVMKLEIAVDSIT--DLAPVF 172
+I S ++ G E L ACM D+++L IT L P
Sbjct: 114 VIRSRHVMDGVPEDLEHWMVETAGQGLVPKAACMLGGTEDLLRLVRLHRRITAEGLPPGS 173
Query: 173 EMLTHCQVPLIALAVGSRGLISQLLGPKFGGFLVYGSLGGKSV-PGLPTLVSLKQVYQLE 231
+L L +G G+ S++L +G L + S G++ PG + +Y++
Sbjct: 174 YIL---------LGMGPYGVPSRILSLAWGSLLTFSSDPGRTAAPGHLDPGVMADLYRVR 224
Query: 232 HINPDTKIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLVDDVKEFFRTYSGTDFAG 291
++ T +FG++ NPV HS+ P LHNP +R + +Y+P+ VDD+ F G
Sbjct: 225 ELSESTVLFGVIGNPVLHSRSPHLHNPVYRREGMDAVYLPIQVDDLTSFMDLADELSLQG 284
Query: 292 FSVGIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALRE 351
SV IPHKE + P+ +++G+ NT++RR DG G +TD E + LRE
Sbjct: 285 LSVTIPHKEGVIPFLTVRDPVVQAVGSCNTMVRR--DGGWFGTSTDVEGFLR----PLRE 338
Query: 352 RQGINGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGARVIIFNRNYERAKALAD--A 409
+A P+ K V++GAGGA RA+ +G G RV++ NR ERA+ LA+
Sbjct: 339 E-----IARGGDPVM-KAAVVLGAGGAARAVVYGLVQEGFRVLVLNRTEERARVLAEEFG 392
Query: 410 VSGEALHFEYLHEFFPEKGMILANASAIGMEPNSDQSPVPKEALKAYELVFDAVYTPRNT 469
V AL E +G+I+ S +GME SPVP + E+ +D VYTPR T
Sbjct: 393 VDWGALSPESAERMREFRGLIVQTTS-VGMEGKEPASPVPWYRFEGDEICYDIVYTPRIT 451
Query: 470 RLLREAAEVGATVVSGVEMFIRQALGQFRLF 500
L A G +++G M QA Q RLF
Sbjct: 452 PFLEAARRAGCRIITGDRMLEAQAEEQMRLF 482
>gi|51246864|ref|YP_066748.1| shikimate 5-dehydrogenase [Desulfotalea psychrophila LSv54]
gi|50877901|emb|CAG37741.1| probable shikimate 5-dehydrogenase [Desulfotalea psychrophila
LSv54]
Length = 296
Score = 185 bits (470), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 106/277 (38%), Positives = 148/277 (53%), Gaps = 19/277 (6%)
Query: 237 TKIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLVDDVKEFFRTYSGTDFAGFSVGI 296
T ++G++ NPV HS P++HN AF + +YVP V+DV+ + G + G SV I
Sbjct: 19 TAVYGIIGNPVSHSMSPLMHNAAFESLGIDAVYVPFRVEDVESAVQGLRGLNICGVSVTI 78
Query: 297 PHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGK--LVGYNTDCESAISAIEDALRERQG 354
PHKE + DEV P+A IGAVNTI+ DG+ L G+NTD A A++ +
Sbjct: 79 PHKEAVIPLLDEVDPVAGKIGAVNTIVSSMRDGRPFLKGFNTDWIGANRALQAVV----- 133
Query: 355 INGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGARVIIFNRNYERAKALADAVSGEA 414
+ GK +L+GAGG+ RA+ FG GA VI+ +R R + LAD
Sbjct: 134 ---------SLKGKQVLLLGAGGSARAIGFGLLEAGAEVILCSRTPSRGRQLADEFGCLW 184
Query: 415 LHFEYLHEFFPEKGMILANASAIGMEPNSDQSPVPKEALKAYELVFDAVYTPRNTRLLRE 474
L E + + I+ NA+++GM P D S + E L E V D VY+P TRLL
Sbjct: 185 LSLEDIGSV---RADIVVNATSVGMAPQEDVSLMTVEQLSGVEAVMDIVYSPHRTRLLAN 241
Query: 475 AAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMR 511
A + G +VSG+EM + Q + QF L+ G AP MR
Sbjct: 242 ADKAGCAIVSGLEMLLYQGVQQFELWQGREAPLAVMR 278
>gi|328952377|ref|YP_004369711.1| shikimate dehydrogenase [Desulfobacca acetoxidans DSM 11109]
gi|328452701|gb|AEB08530.1| Shikimate dehydrogenase [Desulfobacca acetoxidans DSM 11109]
Length = 275
Score = 184 bits (467), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 103/284 (36%), Positives = 152/284 (53%), Gaps = 19/284 (6%)
Query: 233 INPDTKIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLVDDVKEFFRTYSGTDFAGF 292
I T IFG++ PV HS P +HN AF N +YVP V D+ + G + G
Sbjct: 2 ITGATIIFGILGRPVAHSLSPAMHNAAFAALGLNAVYVPFAVQDLVAAVQGLRGLNIGGV 61
Query: 293 SVGIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALRER 352
SV IP KE + DEV A++IGAVNT++ R G L G NTD + A++ +++ +
Sbjct: 62 SVTIPFKEEIIPLLDEVDEEAQTIGAVNTVVNR--QGWLWGCNTDWQGALTPLQEQI--- 116
Query: 353 QGINGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGARVIIFNRNYERAKALADAVSG 412
++G+ +++GAGGAGRA+ + + V + + N +RA+ LA
Sbjct: 117 -----------ALSGQQIMVLGAGGAGRAIVYAVRRAAGLVTVADLNPDRARNLAQEFGV 165
Query: 413 EALHFEYLHEFFPEKGMILANASAIGMEPNSDQSPVPKEALKAYELVFDAVYTPRNTRLL 472
L E + + +L NAS +GM P+ + +P+P L +++V D VY P TRLL
Sbjct: 166 ACLPLEEIDQ---STATVLINASPVGMAPHIEATPLPARCLDRFQVVMDIVYQPLQTRLL 222
Query: 473 REAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRKLVLE 516
REAA GA + G++M I Q QF LFTG +P + MR+ LE
Sbjct: 223 REAAARGARTIDGLQMLIHQGARQFELFTGQPSPVETMRRAALE 266
>gi|224369347|ref|YP_002603511.1| hypothetical protein HRM2_22490 [Desulfobacterium autotrophicum
HRM2]
gi|223692064|gb|ACN15347.1| AroE1 [Desulfobacterium autotrophicum HRM2]
Length = 271
Score = 183 bits (465), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 115/286 (40%), Positives = 163/286 (56%), Gaps = 19/286 (6%)
Query: 233 INPDTKIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLVDDVKEFFRTYSGTDFAGF 292
+N DT+++ L +PV HS GP++HN AF+ NG+Y+ V + + + AG
Sbjct: 2 LNSDTRLYALFGDPVAHSLGPVMHNAAFQKANINGVYLAFRVPRIDDAIASMKALGIAGA 61
Query: 293 SVGIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALRER 352
SV IPHKE + D + PLA+ +GAVNTII R DG L GYNTDC A+ +E
Sbjct: 62 SVTIPHKETVIPLLDRIDPLARGMGAVNTIINR--DGMLFGYNTDCMGAVDPLE------ 113
Query: 353 QGINGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGARVIIFNRNYERAKALADAVSG 412
GV + G+ V++GAGGA RA+AFG + +GA I NR+ +R + LAD +
Sbjct: 114 ----GVCD----LKGRRVVVLGAGGAARAVAFGIRQQGAIPFIVNRSIKRGRTLADELGA 165
Query: 413 EALHFEYLHEFFPEKGMILANASAIGMEPNSDQSPVPKEALKAYELVFDAVYTPRNTRLL 472
+ + P+ I+ NA+AIGM P++D P+ E LK +V D VYTP T L+
Sbjct: 166 AFIPKADIATVDPD---IIVNATAIGMAPDNDAIPLDPEILKPGMVVMDIVYTPVRTALI 222
Query: 473 REAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRKLVLEQF 518
+ AAE G TV+ G+ MF+ Q QF LFTG AP M+ ++L+
Sbjct: 223 KAAAERGCTVIDGMAMFVNQGALQFELFTGKKAPIQTMKSVLLKAL 268
>gi|451945874|ref|YP_007466469.1| shikimate dehydrogenase [Desulfocapsa sulfexigens DSM 10523]
gi|451905222|gb|AGF76816.1| shikimate dehydrogenase [Desulfocapsa sulfexigens DSM 10523]
Length = 273
Score = 181 bits (459), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 102/286 (35%), Positives = 152/286 (53%), Gaps = 23/286 (8%)
Query: 233 INPDTKIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLVDDVKEFFRTYSGTDFAGF 292
I+ T ++G++ NPV HS P +HN A + +Y+P D+ G G
Sbjct: 3 ISGTTVLYGIIGNPVTHSLSPAMHNAALAALGIDAVYLPFPASDIAAAVTGIRGLGIQGL 62
Query: 293 SVGIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALRER 352
SV IPHKE +A D V P+A IGAVNTI+ + L G NTD A A+E+ +
Sbjct: 63 SVTIPHKESVMALLDTVDPVAVKIGAVNTIVNT--EKVLTGLNTDWLGATRALEEEI--- 117
Query: 353 QGINGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGARVIIFNRNYERAKALADAVSG 412
++G V++GAGG+ RA+ FG +GA + + +R R + LAD
Sbjct: 118 -----------DLSGAHAVILGAGGSARAIGFGLLEKGASITLCSRTESRGRRLADE--- 163
Query: 413 EALHFEY--LHEFFPEKGMILANASAIGMEPNSDQSPVPKEALKAYELVFDAVYTPRNTR 470
LH + L E +G +L NA+++GM P + +PV +E +++V D VY P TR
Sbjct: 164 --LHCPWISLEESDRLRGDVLINATSVGMVPQIENTPVSEEVTSQFQVVMDIVYAPMKTR 221
Query: 471 LLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRKLVLE 516
LLREA G +++G+EM + Q + QF ++TG AP MRK ++E
Sbjct: 222 LLREAEAGGCKIINGLEMLLYQGVAQFEIWTGKDAPVSVMRKALVE 267
>gi|94971136|ref|YP_593184.1| 3-dehydroquinate dehydratase [Candidatus Koribacter versatilis
Ellin345]
gi|94553186|gb|ABF43110.1| 3-dehydroquinate dehydratase / shikimate dehydrogenase [Candidatus
Koribacter versatilis Ellin345]
Length = 613
Score = 181 bits (458), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 148/514 (28%), Positives = 244/514 (47%), Gaps = 31/514 (6%)
Query: 11 VCTQLECETTEEMQASIEQAKVEGADLVELCIDSME--FSHISEVDKLIQHPTLPAIVSY 68
VC + T EEM A E E +E +D + + + +V +L++ I+
Sbjct: 19 VCVAVIGATPEEMIAKAEGIIRENP-FLEFRLDYLTNPAAALPKVKRLLETRPDAVIIGT 77
Query: 69 RLKSSRKSSDEACKNTCLQVLRRALDLDVEFVEMDYEVASDPLMSEIIYSRSNTKIIVSS 128
++ + + L++L +A + ++++ E A SE+ R II+S
Sbjct: 78 CRRAVNGGKFKGSASAQLEILAKAAAAGCQLLDVELETAESVKASELQKLREAASIILSF 137
Query: 129 YLNGGGKPTTEKLGDVIACMQATGADVMKLEIAVDSITDLAPVFEMLTHC--QVPLIALA 186
+ T+KL D++A M + K+ S+ D + + L LI L
Sbjct: 138 H----DFKATKKLDDILARMVKIHVEYYKVVSTATSLYDNVQMMKFLEKHGHDYWLIGLC 193
Query: 187 VGSRGLISQLLGPKFGGFLVYG--SLGGKSVPGLPTLVSLKQVYQLEHINPDTKIFGLVS 244
+G +G+IS++L + G + S G ++ PG T L+ ++++H++ T ++G+
Sbjct: 194 MGEQGIISRVLSVRAGSVFTFAAASAGEETAPGQVTYRDLRSTFRIDHVDAATHVYGVAG 253
Query: 245 NPVGHSKGPILHNPAFRHTRFNGIYVPMLVDDVKEFFRTYSGTDFAGFSVGIPHKEPAVA 304
+PV HS P + N AFR NG+Y+ + + G S+ +PHKE V
Sbjct: 254 DPVAHSLSPAMMNLAFRRENVNGVYLALHTKKTDDLMACIRDIPLRGLSITMPHKEEMVK 313
Query: 305 CCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALRERQGINGVASHTSP 364
L + IGAVNTI+R DGKL G+NTD GI G S
Sbjct: 314 HLANTDDLVRKIGAVNTIVRAQ-DGKLYGFNTDV--------------AGIVGPLSDRIT 358
Query: 365 IAGKIFVLVGAGGAGRALAFGAKSRGARVIIFNRNYERAKALADAVSGEALHFEYLHEFF 424
+ G ++VGAGGA RA FG +RGA + I NR +A+ LA + + L +
Sbjct: 359 VTGAKILVVGAGGAARAAVFGLAARGAHISIVNRTVPKAQKLAKEAGAKVVKRADLKKLD 418
Query: 425 PEKGMILANASAIGMEPNSDQSPVPKEALKAYELVFDAVYTPRNTRLLREAAEVGATVVS 484
+ ++ NA+++GM N SP+ + L+A +VFD VY P NTRL++ A G +
Sbjct: 419 FD---VIINATSVGMM-NPKVSPLEADELRA-RIVFDMVYNPVNTRLIQLAKAKGLATIP 473
Query: 485 GVEMFIRQALGQFRLFTGGLAPEDFMRKLVLEQF 518
G EMF++Q QF +++G AP + MR +V++
Sbjct: 474 GYEMFVQQGARQFEIWSGKPAPVEEMRGIVMKAL 507
>gi|374315064|ref|YP_005061492.1| shikimate 5-dehydrogenase [Sphaerochaeta pleomorpha str. Grapes]
gi|359350708|gb|AEV28482.1| shikimate 5-dehydrogenase [Sphaerochaeta pleomorpha str. Grapes]
Length = 497
Score = 178 bits (451), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 137/519 (26%), Positives = 236/519 (45%), Gaps = 49/519 (9%)
Query: 10 LVCTQLECETTEEMQASIEQAKVEGADLVELCIDSMEFSHISEVDKLIQHPTLPAIVSYR 69
++C L T EE +A + + + + L EL +D + E +P I++ R
Sbjct: 1 MLCLTLTGSTLEEDRALVVKNR-KWISLAELRLDYLNPEEQEEAAVFPNMVDIPVILTLR 59
Query: 70 LKSSRKSSDEAC---KNTCLQVLRRALDLDVEFVEMDYEVASDPLMSEIIYSRSNTKI-- 124
R S C + LQ+L D +V+++ ++ ++ + S T+I
Sbjct: 60 ----RVSDGGRCTLGEKQRLQLLYNTAKGDFAYVDIEEDIKK----CDLKFKESGTEIKV 111
Query: 125 ------------IVSSYLNGGGKPTTEKLGDVIACMQATGADVMKLEIAVDSITDLAPVF 172
I+ SY + P + I+ + A G D+ K+ + S+ D+ +F
Sbjct: 112 DLESSLRMRNIKIIRSYHDFEKVPA--DIYGHISKLAAKG-DIPKIAVTPKSMIDVISLF 168
Query: 173 EMLTHCQ--VPLIALAVGSRGLISQLLGPKFGGFLVYGSLGGKSVP--GLPTLVSLKQVY 228
+ Q I + +G G+ +++L K G L + + + VP G + ++ ++Y
Sbjct: 169 RVQQELQGIKDKIIIGMGDFGIPTRILYKKCGSMLTFCTDSSEKVPAPGQLSAQTMSELY 228
Query: 229 QLEHINPDTKIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLVDDVKEFFRTYSGTD 288
+ + ++ T I+G++ NPV H+ P++HNP F +N +YVP LVD V+ FF+
Sbjct: 229 RSDKLDDRTHIYGIIGNPVYHTSSPLIHNPGFLAIHYNAVYVPFLVDSVRAFFKLAEMLQ 288
Query: 289 FAGFSVGIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDA 348
GFSV +PHK + K IGA NT+ R I G NTD ++ I +
Sbjct: 289 IHGFSVTVPHKRDVQPYLGRITREVKQIGACNTVTR--IQNMWKGTNTDYYGFLAPIAEE 346
Query: 349 LRERQGINGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGARVIIFNRNYERAKALAD 408
++ H++ +++GAGGA RA+ + + G +V + NR+ + AK++A
Sbjct: 347 ------VSKGTIHSA-------LVIGAGGASRAVIWALHNHGVKVTVINRSLDHAKSIAS 393
Query: 409 AVSGEALHFEYLHEFFPEKGMILANASAIGMEPNSDQSPVPKEALKAYELVFDAVYTPRN 468
E + + +++ S +GM PN + PVP ELV++ +Y PR
Sbjct: 394 ETMSSYDSLENCSRYSGKVDLVVQTTS-VGMTPNDTEDPVPALRFLGNELVYELIYHPRE 452
Query: 469 TRLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPE 507
T L+ A G TVV G +M + Q QF FTG P
Sbjct: 453 TVFLKRAIAAGCTVVQGRDMLMEQGKLQFEAFTGYHYPH 491
>gi|338733093|ref|YP_004671566.1| bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase
[Simkania negevensis Z]
gi|336482476|emb|CCB89075.1| bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase,
chloroplastic [Simkania negevensis Z]
Length = 493
Score = 177 bits (450), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 149/488 (30%), Positives = 250/488 (51%), Gaps = 43/488 (8%)
Query: 24 QASIEQAKVEGADLVELCIDSM-EFSHISEVDKLIQHPTLPAIVSYRLKSSR---KSSDE 79
+ +IE+A +G + +EL +D + + H+S++ L + LP I + R K+ + S++
Sbjct: 14 KKAIEEANNKG-EAIELRLDLLKDLEHVSKLKSLCK---LPVIFTLRKKAQGGEFQGSEQ 69
Query: 80 ACKNTCLQVLRRALDLDVEFVEMDYEVASDPLMSEIIYSRSNTKIIVSSYLNGGGKPTTE 139
+ L++ L L ++V+++++V DP ++ ++ I+ SY + P +
Sbjct: 70 EREAKLLEL----LTLKPDYVDLEFDV--DPSFAKKVHQSFPDVAIICSYHDFDKTP--D 121
Query: 140 KLGDVIACMQATGADVMKLEIAVDSITDLAPVFEMLTHCQ---VPLIALAVGSRGLISQL 196
L +V+ M A + K+ +S D + + + + L +++G G I+++
Sbjct: 122 NLENVLTQMTQMRASIYKIATFANSSLDSLRMLSFILQKRREGISLAGMSMGPHGDITRI 181
Query: 197 LGPKFGGFLVYGSLGG--KSVPGLPTLVSLKQVYQLEHINPDTKIFGLVSNPVGHSKGPI 254
L P L Y SL K+ PG + +L+++Y+ +N TK++ L+ +PV S G
Sbjct: 182 LAPIVDSLLTYTSLSSEEKTAPGQVPVDTLEKIYRFSTLNQQTKVYALIGDPVEQSIGHF 241
Query: 255 LHNPAFRHTRFNGIYVPMLV--DDVKEFFRTYSGTDFAGFSVGIPHKEPAVACCDEVHPL 312
HN F+ + N +YV +LV ++V FF+ F GFSV +P KE D ++P
Sbjct: 242 AHNTLFKKLKENAVYVKILVRSEEVGPFFQLLKTLPFHGFSVTMPLKEKVGEHLDHINPQ 301
Query: 313 AKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALRERQGINGVASHTSPIAGKIFVL 372
AK IGA+NT+ +G+ G+NTD A+ AIE+ +RQ +AGK V+
Sbjct: 302 AKKIGAINTLNLN--EGRWEGFNTDASGALDAIEE---KRQ-----------VAGKKVVI 345
Query: 373 VGAGGAGRALAFGAKSRGARVIIFNRNYERAKALADAVSGEALHFEYLHEFFPEKGMILA 432
+GAGGA RALA+ RG V+I NR E+AK LA + E + E + IL
Sbjct: 346 LGAGGAARALAYETIERGGEVLIVNRTEEKAKKLARQLGCEGVALE---RWTKPSYDILM 402
Query: 433 NASAIGMEPNSDQSPVPKEALKAYELVFDAVYTPRNTRLLREAAEVGATVVSGVEMFIRQ 492
N + +GM S + ++AL +VFDA+ P+ T LL A G +V G EMF RQ
Sbjct: 403 NTTPVGM-TTKGLSLISEKALLKNAVVFDAIMYPKETPLLILAKNKGCQIVYGNEMFTRQ 461
Query: 493 ALGQFRLF 500
A+ Q ++
Sbjct: 462 AVKQAEIW 469
>gi|307718011|ref|YP_003873543.1| 3-dehydroquinate dehydratase [Spirochaeta thermophila DSM 6192]
gi|306531736|gb|ADN01270.1| 3-dehydroquinate dehydratase, type 1 [Spirochaeta thermophila DSM
6192]
Length = 491
Score = 177 bits (448), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 152/517 (29%), Positives = 235/517 (45%), Gaps = 66/517 (12%)
Query: 11 VCTQLECETTEEMQASIEQAKVEGADLVELCIDSMEFSHISEVDKLIQHPTLPAIVSYR- 69
VC L T +E + + + + E DL+E+ D M+ + + LPAI++ R
Sbjct: 5 VCLSLTGRTRKEAETQLARWREE-VDLLEVRADCMDEGEWEGLGEWASGLGLPAILTLRS 63
Query: 70 ------LKSSRKSSDEACKNTCLQVLRRALDLDVEFVEMDYEVASDPLMSEIIYSRSNTK 123
+ + DEA Q +D++ A+D L+ E R
Sbjct: 64 DRDGGFFEGTEDVHDEALGELIRQGGWAYVDVEA--------WAADWLVDEA--RRRGMY 113
Query: 124 IIVSSYLNGGGKPTTEKLGDVI------------ACMQATGADVMKLEIAVDSIT--DLA 169
+I S ++ G E L D + ACM D+++L +T L
Sbjct: 114 VIRSRHVMDG---VPEDLEDWMVETVGQGLVPKAACMLGGTEDLLRLVRLHRRLTARGLP 170
Query: 170 PVFEMLTHCQVPLIALAVGSRGLISQLLGPKFGGFLVYGSLGGKSV-PGLPTLVSLKQVY 228
P +L L +G G+ +++L +G L + S G++ PG + +Y
Sbjct: 171 PGSYIL---------LGMGPYGVPTRILSLAWGSLLTFTSDPGRTAAPGHLDPGVMADLY 221
Query: 229 QLEHINPDTKIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLVDDVKEFFRTYSGTD 288
++ ++ T +FG++ NPV HS+ P LHNP +R + +Y+P+ VD++ F
Sbjct: 222 RVRELSESTVLFGVIGNPVLHSRSPHLHNPVYRREGMDAVYLPIQVDELASFMDLADELP 281
Query: 289 FAGFSVGIPHKE---PAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAI 345
G SV IPHKE P + CD P+ +++G+ NT++RR DG G +TD E +
Sbjct: 282 LQGLSVTIPHKEGVIPFLTVCD---PVVQAVGSCNTMVRR--DGGWFGTSTDVEGFLR-- 334
Query: 346 EDALRERQGINGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGARVIIFNRNYERAKA 405
LRE +A P+ K V++GAGGA RA+ +G G RV++ NR ERA+
Sbjct: 335 --PLREE-----IARGGDPVM-KAAVVLGAGGAARAVVYGLVQEGFRVLVLNRTEERARV 386
Query: 406 LAD--AVSGEALHFEYLHEFFPEKGMILANASAIGMEPNSDQSPVPKEALKAYELVFDAV 463
LA V AL E +G+I+ S +GME SPVP + E+ +D V
Sbjct: 387 LAGEFGVDWGALSPESAERMREFRGLIVQTTS-VGMEGKEPASPVPWYRFEGDEICYDIV 445
Query: 464 YTPRNTRLLREAAEVGATVVSGVEMFIRQALGQFRLF 500
YTPR T L A G +++G M QA Q RLF
Sbjct: 446 YTPRITPFLEAARRAGCRIITGDRMLEAQAEEQMRLF 482
>gi|357512135|ref|XP_003626356.1| Dehydroquinate dehydratase/ shikimate dehydrogenase [Medicago
truncatula]
gi|355501371|gb|AES82574.1| Dehydroquinate dehydratase/ shikimate dehydrogenase [Medicago
truncatula]
Length = 224
Score = 176 bits (447), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 99/231 (42%), Positives = 134/231 (58%), Gaps = 51/231 (22%)
Query: 123 KIIVSSYLNGGGKPTTEKLGDVIACMQATGADVMKLEIAVDSITDLAPVFEMLTHCQVPL 182
KII S +++G P TE+L ++A MQATG D++KL IT++ +F + +CQVPL
Sbjct: 14 KIIASCFVDGI-TPPTEELLQLVALMQATGTDIIKLVAHAADITEITRIFSLFPYCQVPL 72
Query: 183 IALAVGSRGLISQLLGPKFGGFLVYGSLGGKSVPGLPTLVSLKQVYQLEHINPDTKIFGL 242
IA ++G GLISQ L PKFGGF V GSL +PGLP+L SL++ Y+LEH+N +T++FGL
Sbjct: 73 IAYSIGESGLISQFLCPKFGGFFVCGSLARNPIPGLPSLHSLQEAYKLEHVNANTEVFGL 132
Query: 243 VS--NPVGHSKGPILHNPAFRHTRFNGIYVPMLVDDVKEFFRTYSGTDFAGFSVGIPHKE 300
+S N + +K +KE
Sbjct: 133 ISSQNQLATAK----------------------------------------------YKE 146
Query: 301 PAVACCDEVHPLAKSI--GAVNTIIRRPIDGKLVGYNTDCESAISAIEDAL 349
+ CDE+HPLA+ + AVNTI R P DGKLVGYNTDCE++I+AIEDAL
Sbjct: 147 EVLRFCDEIHPLAQLVLYRAVNTITREPRDGKLVGYNTDCEASITAIEDAL 197
>gi|339500912|ref|YP_004698947.1| 3-dehydroquinate dehydratase [Spirochaeta caldaria DSM 7334]
gi|338835261|gb|AEJ20439.1| 3-dehydroquinate dehydratase [Spirochaeta caldaria DSM 7334]
Length = 498
Score = 172 bits (437), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 133/492 (27%), Positives = 221/492 (44%), Gaps = 43/492 (8%)
Query: 36 DLVELCIDSMEFSHISEVDKLIQHPTLPAIVSYRLK--SSRKSSDEACKNTCLQVLRRAL 93
D+VEL +D ++ + + +P I++ R K E + L
Sbjct: 28 DVVELRVDFLDPDERFYIRRFPALAGIPTILTVRRKIDGGNFKEGEGARIVLLAAGLAFA 87
Query: 94 DLDVE--FVEMDYEVASD-PLMSEIIYSRSNTKIIVSSYLNGGGKPTTEKLGDVIACMQA 150
D D F +D E D P + E +R+ I+ SY N G E L + ++
Sbjct: 88 DTDQRRNFAYVDLEEDLDVPSLEEA--ARTFGTKIIRSYHNFHG--VDENLEQKLRSLRR 143
Query: 151 TGADVMKLEIAVDSITDLAPVFEMLTHCQ-VPLIALAVGSRGLISQLLGPKFGGFLVYGS 209
TG ++ K+ + + D+A +F++ + + I +A+G G+ +++L + G L + S
Sbjct: 144 TGDEIAKVAVMPHNYDDVARLFKVADSTKDMEKILIAMGPHGVSTRILAERLGSHLSFTS 203
Query: 210 LGGK---------SVPGLPTLVSLKQVYQLEHINPDTKIFGLVSNPVGHSKGPILHNPAF 260
+ + PG +L Y+ +N TK++G++ P+ + P +HN +
Sbjct: 204 PIAEIESDSEIQVAGPGQLDPRTLVDTYRFRSLNHKTKVYGIIGYPLSATASPQIHNEGY 263
Query: 261 RHTRFNGIYVPMLVDDVKEFFRTYSGTDFAGFSVGIPHKEPAVACCDEVHPLAKSIGAVN 320
+ N +Y+P V D+ FF + G SV IPHKE + C + P IG+ N
Sbjct: 264 SRLKMNAVYIPFPVQDLSSFFNLAETLNIQGLSVTIPHKEAVLTYCSQRSPEVDRIGSCN 323
Query: 321 TIIRRPIDGKLVGYNTDCESAISAIEDALRERQGINGVASHTSPIAGKIFVLVGAGGAGR 380
T++R P YNTD + D+L E G + K ++GAGG +
Sbjct: 324 TLVRAP--QGWAAYNTDAQ----GFSDSLLEFIG-------KPNLLFKRVTIIGAGGVAK 370
Query: 381 ALAFGAKSRGARVIIFNRNYERAKALADAVSGEALHFEYLH------EFFPEKGMILANA 434
A+A R ++ NR RAK +A E L+F + E I+
Sbjct: 371 AVASEIHRLKGRALVLNRTPLRAKEIA-----EPLNFAWAGLDARGIELIDHYRDIIIQT 425
Query: 435 SAIGMEPNSDQSPVPKEALKAYELVFDAVYTPRNTRLLREAAEVGATVVSGVEMFIRQAL 494
+++GMEPN D+ P+ + E+V D +Y P T+LL+ AA+ G ++G +M +RQA
Sbjct: 426 TSVGMEPNIDEDPIELYKFRGKEVVMDLIYKPEETKLLKRAAKAGCKTLNGYDMLLRQAK 485
Query: 495 GQFRLFTGGLAP 506
QF LFTG P
Sbjct: 486 LQFSLFTGQEYP 497
>gi|302339344|ref|YP_003804550.1| shikimate 5-dehydrogenase [Spirochaeta smaragdinae DSM 11293]
gi|301636529|gb|ADK81956.1| shikimate 5-dehydrogenase [Spirochaeta smaragdinae DSM 11293]
Length = 492
Score = 172 bits (435), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 133/476 (27%), Positives = 228/476 (47%), Gaps = 32/476 (6%)
Query: 45 MEFSHI--SEVDKLIQHPT---LPAIVSYRLKSSRKSSDEACKNTCLQVLRRALDLDVEF 99
+ F H+ E +K + P+ LP I + RL E + + +LR+A + F
Sbjct: 30 IRFDHLVPEEREKALILPSCSDLPLIATARLPKDGGVWKEG-EEERIDLLRKAAESGFAF 88
Query: 100 VEMDYEVASDPLMSEIIYSRSNTKIIVSSYLNGGGKPTTEKLGDVIACMQATGADVMKLE 159
V+++ + L S + +++S+ + L ++ + GA + K
Sbjct: 89 VDLEADQPRSLLRSFVELLSGYGGRLIASFHDFTSFTDERTLFSMVEEAEGLGA-IPKAA 147
Query: 160 IAVD-SITDLAPVFEMLTHCQVPL--IALAVGSRGLISQLLGPKFGGFLVYGSLGGK-SV 215
+ +D S++ LA L + P I +A+GS G+ ++ FG L + + K +
Sbjct: 148 VMIDGSVSLLAFTRAALKLKERPAERILVAMGSFGVPVRIAYRHFGSMLTFCAPAEKIAA 207
Query: 216 PGLPTLVSLKQVYQLEHINPDTKIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLVD 275
PG + +L Y L I+ +++FG++ NPV H++ P +HN AFR F+G+Y+P D
Sbjct: 208 PGQLSAEALAFPYALSRISDKSRLFGIIGNPVLHTRSPEIHNSAFRSIGFDGLYLPFPTD 267
Query: 276 DVKEFFRTYSGTDFAGFSVGIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYN 335
D F + GFSV +P KE + EV ++IG+ NT+ RR + G N
Sbjct: 268 DTVAFMEIARLLEIGGFSVTVPFKEEIIGRLHEVDENVRAIGSCNTVFRR--GHEFHGTN 325
Query: 336 TDCESAISAIEDALRERQGINGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGARVII 395
TD + ++ ++ L +R G +++G+GGA R++A +S V++
Sbjct: 326 TDYDGFLAPLKIRLGKRGGRA--------------LMIGSGGAARSVAVALRSLFDSVVV 371
Query: 396 FNRNYERAKALADAVSGEALHF---EYLHEFFPEKGMILANASAIGMEPNSDQSPVPKEA 452
NR + RA+ L++A+ GE H E P + ++ +++GM P+ D P+P
Sbjct: 372 ANRTHSRAQRLSEALLGEKGHVCSPEEAGSLGPYR--VIVQTTSVGMSPHIDDDPLPSYC 429
Query: 453 LKAYELVFDAVYTPRNTRLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPED 508
ELV+D +Y P T L+ A G ++ G EM + QA QF LFTG P+D
Sbjct: 430 FTGDELVYDIIYIPEKTHFLQRAEASGCDIIGGKEMLLGQAERQFELFTGLRYPKD 485
>gi|297568001|ref|YP_003689345.1| shikimate 5-dehydrogenase [Desulfurivibrio alkaliphilus AHT2]
gi|296923916|gb|ADH84726.1| shikimate 5-dehydrogenase [Desulfurivibrio alkaliphilus AHT2]
Length = 270
Score = 172 bits (435), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 108/286 (37%), Positives = 155/286 (54%), Gaps = 19/286 (6%)
Query: 233 INPDTKIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLVDDVKEFFRTYSGTDFAGF 292
I+ T+++G++ NPV HS+ P +HN AF N +YVP+ D AG
Sbjct: 4 IDGSTEVYGIIGNPVRHSRSPAMHNAAFAACGLNKVYVPLPALDGAAAVAAIRTLGIAGA 63
Query: 293 SVGIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALRER 352
SV IPHKE + D+V P+A IGAVNTI+RR +L G NTD A A+ +AL
Sbjct: 64 SVTIPHKETVIEQLDKVDPVAARIGAVNTIVRR--GDELHGANTDWLGANQALGEALE-- 119
Query: 353 QGINGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGARVIIFNRNYERAKALADAVSG 412
+AG +L+GAGG+ RA+ FG + GA+VI+ +R ER + LA +
Sbjct: 120 ------------LAGAKVLLLGAGGSARAIGFGLREAGAKVILASRTPERGQELAQQLD- 166
Query: 413 EALHFEYLHEFFPEKGMILANASAIGMEPNSDQSPVPKEALKAYELVFDAVYTPRNTRLL 472
+ L + + L NA+++GM P ++QSP+P AL A+ +V D VY+P TRLL
Sbjct: 167 --CPWVPLEQAAEQAANALVNATSVGMAPLAEQSPLPAAALAAFPVVMDIVYSPLQTRLL 224
Query: 473 REAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRKLVLEQF 518
REA G + G+ M + Q QF ++T AP MR+ +LE
Sbjct: 225 REAEAAGCHCIDGLAMLLYQGAAQFTMWTNQEAPLAIMRQTLLENL 270
>gi|115488882|ref|NP_001066928.1| Os12g0534000 [Oryza sativa Japonica Group]
gi|113649435|dbj|BAF29947.1| Os12g0534000, partial [Oryza sativa Japonica Group]
Length = 148
Score = 171 bits (434), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 82/140 (58%), Positives = 106/140 (75%)
Query: 379 GRALAFGAKSRGARVIIFNRNYERAKALADAVSGEALHFEYLHEFFPEKGMILANASAIG 438
G+ALA+GAK +GARV+I NR + RA+ L + + AL L + PE+ MILAN +AIG
Sbjct: 8 GKALAYGAKEKGARVVIANRTFARAQELGNLLGAPALTLAELENYHPEEEMILANTTAIG 67
Query: 439 MEPNSDQSPVPKEALKAYELVFDAVYTPRNTRLLREAAEVGATVVSGVEMFIRQALGQFR 498
M PN +++P+ K+ALK+Y +VFDAVYTP+ TRLLREAAE GATVVSG+EMFIRQA+GQF
Sbjct: 68 MHPNVNETPLSKQALKSYAVVFDAVYTPKETRLLREAAECGATVVSGLEMFIRQAMGQFE 127
Query: 499 LFTGGLAPEDFMRKLVLEQF 518
FTG AP+ MR +VL +
Sbjct: 128 HFTGMPAPDSLMRDIVLTKI 147
>gi|307109521|gb|EFN57759.1| hypothetical protein CHLNCDRAFT_143054 [Chlorella variabilis]
Length = 375
Score = 171 bits (433), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 106/281 (37%), Positives = 157/281 (55%), Gaps = 7/281 (2%)
Query: 11 VCTQLECETTEEMQASIEQAKVEGADLVELCIDSME-FSHISEVDKLIQHPTLPAIVSYR 69
+CT L T E M A ++A+ GAD+VEL +D ++ F+ +++ +L+Q LPAIV+YR
Sbjct: 23 LCTSLVAPTVEGMLAEAQEAEQNGADIVELRLDYLQQFAPEADLSRLLQACPLPAIVTYR 82
Query: 70 LKSSRKSSDEACKNTCLQVLRRALDLDVEFVEMDYEVASDPLMSEIIYSRSNTKIIVSSY 129
+ + + L LR A +V+++ +VA P + +IVSS+
Sbjct: 83 -PTWEGGKYDGPEPQRLAALRLAALSGAAYVDVELKVA--PAFFAGTQPWAGGAVIVSSH 139
Query: 130 LNGGGKPTTEKLGDVIACMQATGADVMKLEIAVDSITDLAPVFEMLTHCQVPLIALAVGS 189
+ + E+L ++ GAD++K + ITD V +L C VP IALA+G
Sbjct: 140 -DYERTASEEELMALVERCHGAGADIVKFATMANDITDAHRVLSVLRRCPVPCIALAMGE 198
Query: 190 RGLISQLLGPKFGGFLVYGSLGGK--SVPGLPTLVSLKQVYQLEHINPDTKIFGLVSNPV 247
RG IS+LL PK+GGFL +G+L S PG PTL L +Y L+ DT + G+V NPV
Sbjct: 199 RGQISRLLAPKYGGFLTFGALSPDRASAPGQPTLQQLSGMYGLKQQRRDTAVLGIVGNPV 258
Query: 248 GHSKGPILHNPAFRHTRFNGIYVPMLVDDVKEFFRTYSGTD 288
HS+ P +HN A R NG+YVP+LVDD+ F T++G D
Sbjct: 259 SHSRSPAIHNAALRQAGLNGVYVPLLVDDMPSFLATFTGED 299
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 44/75 (58%), Positives = 53/75 (70%)
Query: 444 DQSPVPKEALKAYELVFDAVYTPRNTRLLREAAEVGATVVSGVEMFIRQALGQFRLFTGG 503
D++PVP AL Y LVFDAVYTP +TRLLR+AA G VV+G MF+ QA QFRLFTG
Sbjct: 299 DETPVPATALGGYRLVFDAVYTPLHTRLLRDAATAGCAVVTGDTMFVGQAADQFRLFTGV 358
Query: 504 LAPEDFMRKLVLEQF 518
AP + MR +VL+
Sbjct: 359 EAPVELMRSVVLDSL 373
>gi|423406241|ref|ZP_17383390.1| shikimate dehydrogenase [Bacillus cereus BAG2X1-3]
gi|401660235|gb|EJS77717.1| shikimate dehydrogenase [Bacillus cereus BAG2X1-3]
Length = 277
Score = 171 bits (433), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 103/290 (35%), Positives = 160/290 (55%), Gaps = 26/290 (8%)
Query: 238 KIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLVDD--VKEFFRTYSGTDFAGFSVG 295
+++G++ NP+GHS P++HN AF H + Y LV++ + E R +GF+V
Sbjct: 3 QLYGVIGNPIGHSLSPVMHNDAFEHLDMDAHYHAFLVEEEVLGEAVRGLKALGISGFNVT 62
Query: 296 IPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALRERQGI 355
PHK + DE+ PLA+ IGAVNT++ + DGKL+GYNTD + A++
Sbjct: 63 TPHKVAIMDYLDEIDPLARQIGAVNTVVHK--DGKLIGYNTDGIGFVRALQ--------- 111
Query: 356 NGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGARVI-IFNRNYERAKALADA----V 410
A + P+ GK +L+GAGGA RA+ F G I + NR ++AK L A V
Sbjct: 112 ---AVSSEPLQGKRILLLGAGGASRAIYFSLADVGVEEIDVANRTVDKAKELIAACTANV 168
Query: 411 SGEALHFEYLHEFFPEKGM--ILANASAIGMEPNSDQSPVPKEALKAYELVFDAVYTPRN 468
+ AL E E E+G I+ + IGM P+ + +P+ +LK +V D +Y P
Sbjct: 169 NSVALSLEKATE---EQGNYDIIIQTTTIGMHPHVEHTPLHISSLKKGTIVSDIIYNPFE 225
Query: 469 TRLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRKLVLEQF 518
TR+L EA E GA + +G++MF+ Q F ++TG + D M++LV+++
Sbjct: 226 TRILCEAKEQGAIIQNGIDMFVYQGALAFEMWTGRVPNIDRMKQLVIKKL 275
>gi|326526517|dbj|BAJ97275.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 294
Score = 171 bits (432), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 98/267 (36%), Positives = 158/267 (59%), Gaps = 11/267 (4%)
Query: 10 LVCTQLECETTEEMQASIEQAKVEGADLVELCIDSME-FSHISEVDKLIQHPTLPAIVSY 68
L+C L T EEM+ A G DLVE+ +D +E F ++ +L+ LP +V+Y
Sbjct: 10 LLCVPLVGRTVEEMKIDAAAAAAAGGDLVEIRLDYIEGFRPREDLPRLLHSCPLPVLVTY 69
Query: 69 R--LKSSRKSSDEACKNTCLQVLRRALDLDVEFVEMDYEVASDPLMSEIIYSRSN-TKII 125
R + R D+A + + L A++L V++V+++ +VA D + + ++ + K+I
Sbjct: 70 RPNWEGGRYEGDDATR---FETLSLAMELGVDYVDIELKVA-DKFVDFLSGTKPDKCKLI 125
Query: 126 VSSYLNGGGKPTTEKLGDVIACMQATGADVMKLEIAVDSITDLAPVFEMLTHCQVPLIAL 185
VSS+ N P+ E+L +++A +Q GAD++K+ I D++ +F+++ HCQVP+I L
Sbjct: 126 VSSH-NYESTPSCEELANLVARIQEVGADIVKVATTATDIVDVSRMFQVMVHCQVPMIGL 184
Query: 186 AVGSRGLISQLLGPKFGGFLVYGSLGG--KSVPGLPTLVSLKQVYQLEHINPDTKIFGLV 243
+ RGL+S++L PKFGG+L +G L S PG PTL L +Y + I PDTK+ GL+
Sbjct: 185 VMSERGLMSRVLSPKFGGYLTFGILDATKTSAPGQPTLEELLDIYNIRCIGPDTKVLGLI 244
Query: 244 SNPVGHSKGPILHNPAFRHTRFNGIYV 270
+NPV SK PILHN + +N + V
Sbjct: 245 ANPVKQSKSPILHNKCLQSVGYNAMQV 271
>gi|423395366|ref|ZP_17372567.1| shikimate dehydrogenase [Bacillus cereus BAG2X1-1]
gi|401654777|gb|EJS72316.1| shikimate dehydrogenase [Bacillus cereus BAG2X1-1]
Length = 277
Score = 170 bits (431), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 102/290 (35%), Positives = 159/290 (54%), Gaps = 26/290 (8%)
Query: 238 KIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLVDD--VKEFFRTYSGTDFAGFSVG 295
+++G++ NP+GHS P++HN AF H + Y LV++ + E R +GF+V
Sbjct: 3 QLYGVIGNPIGHSLSPVMHNDAFEHLDMDAHYHAFLVEEEVLGEAVRGLKALGISGFNVT 62
Query: 296 IPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALRERQGI 355
PHK + DE+ PLA+ IGAVNT++ + DGKL+GYNTD + A++
Sbjct: 63 TPHKVAIMDYLDEIDPLARQIGAVNTVVHK--DGKLIGYNTDGIGFVRALQ--------- 111
Query: 356 NGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGARVI-IFNRNYERAKALADAVSGE- 413
A + P+ GK +L+GAGGA RA+ F G I + NR ++AK L A +
Sbjct: 112 ---AVSSEPLQGKRILLLGAGGASRAIYFSLADVGVEEIDVANRTVDKAKELIAACTAND 168
Query: 414 ---ALHFEYLHEFFPEKGM--ILANASAIGMEPNSDQSPVPKEALKAYELVFDAVYTPRN 468
AL E E E+G I+ + IGM P+ + +P+ +LK +V D +Y P
Sbjct: 169 NSVALSLEKATE---EQGNYDIIIQTTTIGMHPHVEHTPLHISSLKKGTIVSDIIYNPFE 225
Query: 469 TRLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRKLVLEQF 518
TR+L EA E GA + +G++MF+ Q F ++TG + D M++LV+++
Sbjct: 226 TRILCEAKEQGAIIQNGIDMFVYQGALAFEMWTGRVPNIDRMKQLVIKKL 275
>gi|228941501|ref|ZP_04104051.1| Shikimate dehydrogenase [Bacillus thuringiensis serovar berliner
ATCC 10792]
gi|228974431|ref|ZP_04134999.1| Shikimate dehydrogenase [Bacillus thuringiensis serovar
thuringiensis str. T01001]
gi|228981026|ref|ZP_04141328.1| Shikimate dehydrogenase [Bacillus thuringiensis Bt407]
gi|384188408|ref|YP_005574304.1| shikimate 5-dehydrogenase [Bacillus thuringiensis serovar chinensis
CT-43]
gi|410676723|ref|YP_006929094.1| shikimate dehydrogenase AroE [Bacillus thuringiensis Bt407]
gi|452200800|ref|YP_007480881.1| Shikimate 5-dehydrogenase I alpha [Bacillus thuringiensis serovar
thuringiensis str. IS5056]
gi|228778686|gb|EEM26951.1| Shikimate dehydrogenase [Bacillus thuringiensis Bt407]
gi|228785267|gb|EEM33278.1| Shikimate dehydrogenase [Bacillus thuringiensis serovar
thuringiensis str. T01001]
gi|228818151|gb|EEM64226.1| Shikimate dehydrogenase [Bacillus thuringiensis serovar berliner
ATCC 10792]
gi|326942117|gb|AEA18013.1| shikimate 5-dehydrogenase [Bacillus thuringiensis serovar chinensis
CT-43]
gi|409175852|gb|AFV20157.1| shikimate dehydrogenase AroE [Bacillus thuringiensis Bt407]
gi|452106193|gb|AGG03133.1| Shikimate 5-dehydrogenase I alpha [Bacillus thuringiensis serovar
thuringiensis str. IS5056]
Length = 277
Score = 169 bits (427), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 101/290 (34%), Positives = 160/290 (55%), Gaps = 26/290 (8%)
Query: 238 KIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLVDD--VKEFFRTYSGTDFAGFSVG 295
+++G++ NP+GHS P++HN AF H + Y LV++ + E R +GF+V
Sbjct: 3 QLYGVIGNPIGHSLSPVMHNDAFEHLNMDAHYHAFLVEEEALGEAVRGLKALGISGFNVT 62
Query: 296 IPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALRERQGI 355
PHK + DE+ PLA+ IGAVNT++ + +G+L+GYNTD + A++ E
Sbjct: 63 TPHKVAIMEYLDEIDPLARKIGAVNTVVHK--NGRLIGYNTDGIGFVRALQSISNE---- 116
Query: 356 NGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGARVI-IFNRNYERAKALADA----V 410
P+ GK +L+GAGGA RA+ F G + I + NR ++AK L A V
Sbjct: 117 --------PLQGKRILLLGAGGASRAIYFSLADVGVKEIDVANRTVDKAKELIAARTADV 168
Query: 411 SGEALHFEYLHEFFPEKGM--ILANASAIGMEPNSDQSPVPKEALKAYELVFDAVYTPRN 468
+ AL E E E+G I+ + IGM P+ + +P+ +LK +V D +Y P
Sbjct: 169 NSVALSLEKATE---EQGNYDIIIQTTTIGMHPHVEHTPLQMCSLKKGTIVSDIIYNPFE 225
Query: 469 TRLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRKLVLEQF 518
T++L EA E GA + +G++MF+ Q F ++TG + D M++LV+E+
Sbjct: 226 TKILCEAKEQGAIIQNGIDMFVYQGALAFEMWTGRVPNIDRMKQLVIEKL 275
>gi|423527807|ref|ZP_17504252.1| shikimate dehydrogenase [Bacillus cereus HuB1-1]
gi|402451470|gb|EJV83289.1| shikimate dehydrogenase [Bacillus cereus HuB1-1]
Length = 277
Score = 168 bits (426), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 100/290 (34%), Positives = 160/290 (55%), Gaps = 26/290 (8%)
Query: 238 KIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLVDD--VKEFFRTYSGTDFAGFSVG 295
+++G++ NP+GHS P++HN AF H + Y LV++ + E R +GF+V
Sbjct: 3 QLYGVIGNPIGHSLSPVMHNDAFEHLNMDAHYHAFLVEEEALGEAVRGLKALGISGFNVT 62
Query: 296 IPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALRERQGI 355
PHK + DE+ PLA+ IGAVNT++ + +G+L+GYNTD + A++ E
Sbjct: 63 TPHKVAIMEYLDEIDPLARKIGAVNTVVHK--NGRLIGYNTDGIGFVRALQSISNE---- 116
Query: 356 NGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGARVI-IFNRNYERAKALADAVSGE- 413
P+ GK +L+GAGGA RA+ F G + I + NR ++AK L A + +
Sbjct: 117 --------PLQGKRILLLGAGGASRAIYFSLADVGVKEIDVANRTVDKAKELIAARTADV 168
Query: 414 ---ALHFEYLHEFFPEKGM--ILANASAIGMEPNSDQSPVPKEALKAYELVFDAVYTPRN 468
AL E E E+G I+ + IGM P+ + +P+ +LK +V D +Y P
Sbjct: 169 HSVALSLEKATE---EQGNYDIIIQTTTIGMHPHVEHTPLQMCSLKKGTIVSDIIYNPFE 225
Query: 469 TRLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRKLVLEQF 518
T++L EA E GA + +G++MF+ Q F ++TG + D M++LV+E+
Sbjct: 226 TKILCEAKEQGAIIQNGIDMFVYQGALAFEMWTGRVPNIDRMKQLVIEKL 275
>gi|228902860|ref|ZP_04067003.1| Shikimate dehydrogenase [Bacillus thuringiensis IBL 4222]
gi|434377502|ref|YP_006612146.1| shikimate 5-dehydrogenase [Bacillus thuringiensis HD-789]
gi|228856784|gb|EEN01301.1| Shikimate dehydrogenase [Bacillus thuringiensis IBL 4222]
gi|401876059|gb|AFQ28226.1| shikimate 5-dehydrogenase [Bacillus thuringiensis HD-789]
Length = 277
Score = 168 bits (425), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 101/290 (34%), Positives = 159/290 (54%), Gaps = 26/290 (8%)
Query: 238 KIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLVDD--VKEFFRTYSGTDFAGFSVG 295
+++G++ NP+GHS P++HN AF H N Y LV++ + E R +GF+V
Sbjct: 3 QLYGVIGNPIGHSLSPVMHNNAFEHLNMNAHYHAFLVEEEVLGEAVRGLKALGISGFNVT 62
Query: 296 IPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALRERQGI 355
PHK + DE+ PLA+ IGAVNT++ + +G+L+GYNTD + A++ E
Sbjct: 63 TPHKVAIMEYLDEIDPLARKIGAVNTVVHK--NGRLIGYNTDGIGFVRALQSISHE---- 116
Query: 356 NGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGARVI-IFNRNYERAKALADA----V 410
P+ GK +L+GAGGA RA+ F G + I + NR ++AK L A V
Sbjct: 117 --------PLQGKRILLLGAGGASRAIYFSLADVGVKEIDVANRTVDKAKELIAARTADV 168
Query: 411 SGEALHFEYLHEFFPEKGM--ILANASAIGMEPNSDQSPVPKEALKAYELVFDAVYTPRN 468
+ AL E E E+G I+ + IGM P+ + +P+ +LK +V D +Y P
Sbjct: 169 NSVALSLEKATE---EQGNYDIIIQTTTIGMHPHVEHTPLQICSLKKGTIVSDIIYNPFE 225
Query: 469 TRLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRKLVLEQF 518
T++L EA E GA + +G++MF+ Q F ++TG + M++LV+E+
Sbjct: 226 TKILCEAKEQGAIIQNGIDMFVYQGALAFEMWTGSVPNIGRMKQLVIEKL 275
>gi|228993077|ref|ZP_04153000.1| Shikimate dehydrogenase [Bacillus pseudomycoides DSM 12442]
gi|228999127|ref|ZP_04158709.1| Shikimate dehydrogenase [Bacillus mycoides Rock3-17]
gi|228760744|gb|EEM09708.1| Shikimate dehydrogenase [Bacillus mycoides Rock3-17]
gi|228766725|gb|EEM15365.1| Shikimate dehydrogenase [Bacillus pseudomycoides DSM 12442]
Length = 277
Score = 167 bits (424), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 100/290 (34%), Positives = 158/290 (54%), Gaps = 26/290 (8%)
Query: 238 KIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLVDD--VKEFFRTYSGTDFAGFSVG 295
+++G++ NP+GHS P++HN AF H + Y LV++ + E + +GF+V
Sbjct: 3 QLYGVIGNPIGHSLSPLMHNDAFEHLNIDAHYHAFLVEEETLGEAVKGLKALGVSGFNVT 62
Query: 296 IPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALRERQGI 355
PHK + DE+ PLAK IGAVNT++ R DGKL+GYNTD + +++ +E
Sbjct: 63 TPHKVSIMKYLDEIDPLAKQIGAVNTVVHR--DGKLIGYNTDGIGYVRSLQSISKE---- 116
Query: 356 NGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGARVI-IFNRNYERAKALADA----V 410
P+ K +L+GAGGA RA+ F G + I I NR E+A L +
Sbjct: 117 --------PLYQKRILLLGAGGACRAIYFSLADAGVKEIDIANRTVEKANHLLSGCQAKI 168
Query: 411 SGEALHFEYLHEFFPEKGM--ILANASAIGMEPNSDQSPVPKEALKAYELVFDAVYTPRN 468
+ +AL E E E+G I+ + + IGM P+ +P+ +LK +V D +Y P
Sbjct: 169 TSQALSLEQATE---EQGNYDIIIHTTTIGMHPHIQNTPLQIRSLKQGTIVSDIIYNPFE 225
Query: 469 TRLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRKLVLEQF 518
T+LL++A GA V +G++MF+ Q F L+TG + + M++LV+ +
Sbjct: 226 TKLLQDAKAKGAIVQNGIDMFVYQGALAFELWTGRMPNIEKMKQLVMRKL 275
>gi|163942090|ref|YP_001646974.1| shikimate 5-dehydrogenase [Bacillus weihenstephanensis KBAB4]
gi|226697482|sp|A9VHW1.1|AROE_BACWK RecName: Full=Shikimate dehydrogenase
gi|163864287|gb|ABY45346.1| shikimate 5-dehydrogenase [Bacillus weihenstephanensis KBAB4]
Length = 277
Score = 167 bits (424), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 98/288 (34%), Positives = 158/288 (54%), Gaps = 22/288 (7%)
Query: 238 KIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLVDD--VKEFFRTYSGTDFAGFSVG 295
+++G++ NP+GHS P++HN AF H + Y+ LV++ + E + +GF+V
Sbjct: 3 QLYGVIGNPIGHSLSPVMHNDAFEHLNMDAHYLAFLVEEEALGEAVKGLKALGISGFNVT 62
Query: 296 IPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALRERQGI 355
PHK + DE+ PLA+ IGAVNT++ R DGKL+GYNTD + A++ +
Sbjct: 63 TPHKVAIMEYLDEIAPLARQIGAVNTVVHR--DGKLIGYNTDGIGFVRALQSISED---- 116
Query: 356 NGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGARVI-IFNRNYERAKAL----ADAV 410
P+ K +L+GAGGA RA+ F G + I I NR ++AK L + V
Sbjct: 117 --------PLQEKRILLIGAGGASRAIYFSLADVGVKEIDIANRTRDKAKNLISGCMENV 168
Query: 411 SGEALHFEYLHEFFPEKGMILANASAIGMEPNSDQSPVPKEALKAYELVFDAVYTPRNTR 470
+ AL E E E +I+ + IGM P+ + +P+ +LK +V D +Y P T+
Sbjct: 169 NSHALSLECAAENQGEYDIII-QTTTIGMHPHVEYTPLEIRSLKQGTIVSDIIYNPFETK 227
Query: 471 LLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRKLVLEQF 518
+L +A E GA + +G++MF+ Q F ++TG + D M++LV+ +
Sbjct: 228 ILGDAKEQGAIIQNGIDMFVYQGALAFEMWTGCVPNIDRMKQLVMREL 275
>gi|423585186|ref|ZP_17561273.1| shikimate dehydrogenase [Bacillus cereus VD045]
gi|401233829|gb|EJR40315.1| shikimate dehydrogenase [Bacillus cereus VD045]
Length = 277
Score = 167 bits (424), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 100/290 (34%), Positives = 160/290 (55%), Gaps = 26/290 (8%)
Query: 238 KIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLVDD--VKEFFRTYSGTDFAGFSVG 295
+++G++ NP+GHS P++HN AF H + Y LV++ + E R +GF+V
Sbjct: 3 QLYGVIGNPIGHSLSPVMHNDAFEHLNMDAHYHAFLVEEELLGEAVRGLKALGISGFNVT 62
Query: 296 IPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALRERQGI 355
PHK + DE+ PLA+ IGAVNT++ + DG+L+GYNTD + A++ E
Sbjct: 63 TPHKVAIMEYLDEIDPLARKIGAVNTVVHK--DGRLIGYNTDGIGFVRALQSISNE---- 116
Query: 356 NGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGARVI-IFNRNYERAKALADA----V 410
P+ GK +L+G+GGA RA+ F G + I + NR ++AK L A V
Sbjct: 117 --------PLQGKRILLLGSGGASRAIYFSLADVGVKEIDVANRTVDKAKELIAARTADV 168
Query: 411 SGEALHFEYLHEFFPEKGM--ILANASAIGMEPNSDQSPVPKEALKAYELVFDAVYTPRN 468
+ AL E E E+G I+ + IGM P+ + +P+ +LK +V D +Y P
Sbjct: 169 NSVALSLEKATE---EQGNYDIIIQTTTIGMHPHVEHTPLQICSLKKGMIVSDIIYNPFE 225
Query: 469 TRLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRKLVLEQF 518
T++L EA E GA + +G++MF+ Q F ++TG + + M++LV+E+
Sbjct: 226 TKILCEAKEQGAIIQNGIDMFVYQGALAFEMWTGRMPNIERMKQLVIEKL 275
>gi|423385836|ref|ZP_17363092.1| shikimate dehydrogenase [Bacillus cereus BAG1X1-2]
gi|401635892|gb|EJS53647.1| shikimate dehydrogenase [Bacillus cereus BAG1X1-2]
Length = 277
Score = 167 bits (423), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 100/290 (34%), Positives = 159/290 (54%), Gaps = 26/290 (8%)
Query: 238 KIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLVDD--VKEFFRTYSGTDFAGFSVG 295
+++G++ NP+GHS P++HN AF H + Y LV++ + E R +GF+V
Sbjct: 3 QLYGVIGNPIGHSLSPVMHNDAFEHLNMDAHYHAFLVEEEALGEAVRGLKALGISGFNVT 62
Query: 296 IPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALRERQGI 355
PHK + DE+ PLA+ IGAVNT++ + +G+L+GYNTD + A++ E
Sbjct: 63 TPHKVAIMEYLDEIDPLARKIGAVNTVVHK--NGRLIGYNTDGIGFVRALQSISNE---- 116
Query: 356 NGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGARVI-IFNRNYERAKALADAVSGE- 413
P+ GK +L+GAGGA RA+ F G + I + NR ++AK L A + +
Sbjct: 117 --------PLQGKRILLLGAGGASRAIYFSLADVGVKEIDVANRTVDKAKELIAARTADV 168
Query: 414 ---ALHFEYLHEFFPEKGM--ILANASAIGMEPNSDQSPVPKEALKAYELVFDAVYTPRN 468
AL E E E+G I+ + IGM P+ + +P+ LK +V D +Y P
Sbjct: 169 HSVALSLEKATE---EQGNYDIIIQTTTIGMHPHVEHTPLQMCLLKKGTIVSDIIYNPFE 225
Query: 469 TRLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRKLVLEQF 518
T++L EA E GA + +G++MF+ Q F ++TG + D M++LV+E+
Sbjct: 226 TKILCEAKEQGAIIQNGIDMFVYQGALAFEMWTGRVPNIDRMKQLVIEKL 275
>gi|374313118|ref|YP_005059548.1| shikimate 5-dehydrogenase [Granulicella mallensis MP5ACTX8]
gi|358755128|gb|AEU38518.1| shikimate 5-dehydrogenase [Granulicella mallensis MP5ACTX8]
Length = 592
Score = 167 bits (423), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 126/443 (28%), Positives = 213/443 (48%), Gaps = 28/443 (6%)
Query: 79 EACKNTCLQVLRRALDLDVEFVEMDYEVASDPLMSEIIYSRSNTKIIVSSYLNGGGKPTT 138
E L VL +A + + V+++ E + + R ++ S+ + G T
Sbjct: 88 EGSNTGALDVLLKAAESGFQLVDIELEAIEKLPKTTMDRLREAGAAVIISHHDFHG---T 144
Query: 139 EKLGDVIACMQATGADVMKLEIAVDSITDLAPVFEMLTH----CQVPLIALAVGSRGLIS 194
+ L V ++ D +K+ S++D + L + ++ + +G G+IS
Sbjct: 145 KDLDAVYNRIEPFAPDFIKVVPTAKSLSDNLTLMRFLERMEDRSKSSIVGICMGEAGIIS 204
Query: 195 QLLGPKFGGFLVYGSL--GGKSVPGLPTLVSLKQVYQLEHINPDTKIFGLVSNPVGHSKG 252
++LG + G + + G ++ PG +L + Y+++ ++ TK++G+ NP+ S
Sbjct: 205 RVLGLRAGSAFTFAAANAGEETAPGQIAARTLIEDYRIDQVDAATKVYGVAGNPIRSSLS 264
Query: 253 PILHNPAFRHTRFNGIYVPMLVDDVKEFFRTYSGTDFAGFSVGIPHKEPAVACCDEVHPL 312
P++ N AFR N +Y+ + V + F+ G SV +P KE + + PL
Sbjct: 265 PLMMNTAFRRETVNAVYLALQATKVDDLFKLVREIPIQGLSVTMPLKEAIMPLLERTDPL 324
Query: 313 AKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALRERQGINGVASHTSPIAGKIFVL 372
+ IGAVNT++R DGK G+NTD ++ I L R + G K+ VL
Sbjct: 325 SAKIGAVNTVLRAQ-DGKFYGFNTD----VAGIVGPLERRLSLKG---------AKVLVL 370
Query: 373 VGAGGAGRALAFGAKSRGARVIIFNRNYERAKALADAVSGEALHFEYLHEFFPEKGMILA 432
G A A+ FG + +GA V I NR E A+ LA + + + + + + ++
Sbjct: 371 GAGGAARAAV-FGCRDKGAEVWILNRTPETAQKLARQAGAKTIKRDAVAKMGFD---VII 426
Query: 433 NASAIGMEPNSDQSPVPKEALKAYELVFDAVYTPRNTRLLREAAEVGATVVSGVEMFIRQ 492
NA+ +GM + E L A +VFD VY P T LLR A + G T +SGVEMF++Q
Sbjct: 427 NATPVGMTGQKAAPLLQPEDLVA-RIVFDLVYNPIETPLLRLARQKGLTAISGVEMFVQQ 485
Query: 493 ALGQFRLFTGGLAPEDFMRKLVL 515
QF ++TG APE+ M ++VL
Sbjct: 486 GARQFEIWTGKPAPEEEMLRVVL 508
>gi|423417741|ref|ZP_17394830.1| shikimate dehydrogenase [Bacillus cereus BAG3X2-1]
gi|401106912|gb|EJQ14869.1| shikimate dehydrogenase [Bacillus cereus BAG3X2-1]
Length = 277
Score = 167 bits (422), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 98/288 (34%), Positives = 158/288 (54%), Gaps = 22/288 (7%)
Query: 238 KIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLVDD--VKEFFRTYSGTDFAGFSVG 295
+++G++ NP+GHS P++HN AF H + Y LV++ + E + +GF+V
Sbjct: 3 QLYGVIGNPIGHSLSPVMHNDAFEHLNMDAHYHAFLVEEAALGEAVKGLKALGISGFNVT 62
Query: 296 IPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALRERQGI 355
PHK + DEV PLA+ IGAVNT++ R DGKL+GYNTD + A++ +E
Sbjct: 63 TPHKVAIMEYLDEVAPLAEQIGAVNTVVHR--DGKLIGYNTDGIGFVRALQSISKE---- 116
Query: 356 NGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGARVI-IFNRNYERAKALADA----V 410
P+ K +L+GAGGA RA+ F G + I I NR ++A+ L V
Sbjct: 117 --------PLQEKRILLLGAGGASRAIYFSLADVGVKAIDIANRTRDKAENLVAGCLANV 168
Query: 411 SGEALHFEYLHEFFPEKGMILANASAIGMEPNSDQSPVPKEALKAYELVFDAVYTPRNTR 470
+ AL E+ + E +I+ + IGM P+ + +P+ +LK +V D +Y P T+
Sbjct: 169 NSHALSLEHAAKAQGEYDIII-QTTTIGMHPHVEHTPLEIRSLKKGAIVSDIIYNPFETK 227
Query: 471 LLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRKLVLEQF 518
+L +A E GA + +G++MF+ Q F ++TG + D M++LV+ +
Sbjct: 228 ILGDAKEQGAIIQNGIDMFVYQGALAFEMWTGCVPNIDRMKQLVMREL 275
>gi|308271588|emb|CBX28196.1| hypothetical protein N47_G35200 [uncultured Desulfobacterium sp.]
Length = 289
Score = 167 bits (422), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 103/301 (34%), Positives = 160/301 (53%), Gaps = 27/301 (8%)
Query: 229 QLEHINPDTKIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLVDDVKEFFRTYSG-T 287
+L I +TK+ ++ NP+ HS P +HN + + +YV V+D+K
Sbjct: 3 KLTSIGTNTKLCAVIGNPISHSLSPAIHNAGYDALDLDFVYVSFRVEDIKNALAGMRALE 62
Query: 288 DFAGFSVGIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIED 347
+F G SV IPHK + DE+ L ++IG++NT+I GKL+G TD A+ AI D
Sbjct: 63 NFRGMSVTIPHKIAIIDLVDEISDLDRNIGSINTVINEK--GKLIGLGTDGPGALKAIRD 120
Query: 348 ALRERQGINGVASHTSPIAGKIFVLVGAGGAGRALAFG-AKSRGARVI--------IFNR 398
A G+N + G+ +++G+GGA RA+AF A++ G + + N+
Sbjct: 121 A-----GVN--------LEGQKVLMIGSGGAARAIAFTLAQNAGLEKLTLLDIDAAMMNK 167
Query: 399 NYERAKALADAV-SGEALHFEYLHEFFPEKGMILANASAIGMEPNSDQSPVPKEALKAYE 457
KA A+ + L L + +++ + + +GM P D S VP + K +
Sbjct: 168 LASDLKAGTKAIIESDMLTDTSLSANMKQADLVI-HCTPVGMHPKEDASLVPPQLFKPGQ 226
Query: 458 LVFDAVYTPRNTRLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRKLVLEQ 517
++FD VYTP T+LL+EA G +SGVEMFI QA+ QF FTG APE+ MR++V+E+
Sbjct: 227 VIFDVVYTPLKTKLLKEAQMHGLKTISGVEMFINQAVLQFERFTGADAPEEVMRRVVMER 286
Query: 518 F 518
Sbjct: 287 L 287
>gi|423512448|ref|ZP_17488979.1| shikimate dehydrogenase [Bacillus cereus HuA2-1]
gi|402449419|gb|EJV81256.1| shikimate dehydrogenase [Bacillus cereus HuA2-1]
Length = 277
Score = 167 bits (422), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 101/292 (34%), Positives = 158/292 (54%), Gaps = 30/292 (10%)
Query: 238 KIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLVDD--VKEFFRTYSGTDFAGFSVG 295
+++G++ NP+GHS P++HN AF H + Y LV++ + E + +GF+V
Sbjct: 3 QLYGVIGNPIGHSLSPVMHNDAFEHLNMDAHYHAFLVEEEALGEAVKGLKALGISGFNVT 62
Query: 296 IPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAI----EDALRE 351
PHK + DE+ PLA+ IGAVNT++ R DGKL+GYNTD + A+ ED L+E
Sbjct: 63 TPHKVAIMEYLDEIAPLARQIGAVNTVVHR--DGKLIGYNTDGIGFVRALQSISEDPLQE 120
Query: 352 RQGINGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGARVI-IFNRNYERAKALADA- 409
R+ +L+GAGGA RA+ F G + I I NR ++AK L
Sbjct: 121 RR----------------ILLIGAGGASRAIYFSLADVGVKEIDIANRTRDKAKNLISGC 164
Query: 410 ---VSGEALHFEYLHEFFPEKGMILANASAIGMEPNSDQSPVPKEALKAYELVFDAVYTP 466
V+ AL E E E +I+ + IGM P+ + +P+ +LK +V D +Y P
Sbjct: 165 MANVNSHALSLECAAENQGEYDIII-QTTTIGMHPHVEYTPLEIRSLKQGTIVSDIIYNP 223
Query: 467 RNTRLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRKLVLEQF 518
T++L +A E GA + +G++MF+ Q F ++TG + D M++LV+ +
Sbjct: 224 FETKILGDAKEQGAIIQNGIDMFVYQGALAFEMWTGCVPNIDRMKQLVMREL 275
>gi|30022412|ref|NP_834043.1| shikimate 5-dehydrogenase [Bacillus cereus ATCC 14579]
gi|206969455|ref|ZP_03230409.1| shikimate 5-dehydrogenase [Bacillus cereus AH1134]
gi|218234390|ref|YP_002369144.1| shikimate 5-dehydrogenase [Bacillus cereus B4264]
gi|228960604|ref|ZP_04122251.1| Shikimate dehydrogenase [Bacillus thuringiensis serovar pakistani
str. T13001]
gi|229048041|ref|ZP_04193616.1| Shikimate dehydrogenase [Bacillus cereus AH676]
gi|229111808|ref|ZP_04241354.1| Shikimate dehydrogenase [Bacillus cereus Rock1-15]
gi|229129615|ref|ZP_04258583.1| Shikimate dehydrogenase [Bacillus cereus BDRD-Cer4]
gi|229146906|ref|ZP_04275270.1| Shikimate dehydrogenase [Bacillus cereus BDRD-ST24]
gi|229152538|ref|ZP_04280728.1| Shikimate dehydrogenase [Bacillus cereus m1550]
gi|229180612|ref|ZP_04307953.1| Shikimate dehydrogenase [Bacillus cereus 172560W]
gi|296504827|ref|YP_003666527.1| shikimate 5-dehydrogenase [Bacillus thuringiensis BMB171]
gi|365158876|ref|ZP_09355066.1| shikimate dehydrogenase [Bacillus sp. 7_6_55CFAA_CT2]
gi|423411869|ref|ZP_17388989.1| shikimate dehydrogenase [Bacillus cereus BAG3O-2]
gi|423432345|ref|ZP_17409349.1| shikimate dehydrogenase [Bacillus cereus BAG4O-1]
gi|423631057|ref|ZP_17606804.1| shikimate dehydrogenase [Bacillus cereus VD154]
gi|423640585|ref|ZP_17616203.1| shikimate dehydrogenase [Bacillus cereus VD166]
gi|423657290|ref|ZP_17632589.1| shikimate dehydrogenase [Bacillus cereus VD200]
gi|81580465|sp|Q818D0.1|AROE_BACCR RecName: Full=Shikimate dehydrogenase
gi|226724116|sp|B7HCW1.1|AROE_BACC4 RecName: Full=Shikimate dehydrogenase
gi|29897970|gb|AAP11244.1| Shikimate 5-dehydrogenase [Bacillus cereus ATCC 14579]
gi|206735143|gb|EDZ52311.1| shikimate 5-dehydrogenase [Bacillus cereus AH1134]
gi|218162347|gb|ACK62339.1| shikimate dehydrogenase [Bacillus cereus B4264]
gi|228602855|gb|EEK60335.1| Shikimate dehydrogenase [Bacillus cereus 172560W]
gi|228630904|gb|EEK87543.1| Shikimate dehydrogenase [Bacillus cereus m1550]
gi|228636505|gb|EEK92971.1| Shikimate dehydrogenase [Bacillus cereus BDRD-ST24]
gi|228653732|gb|EEL09602.1| Shikimate dehydrogenase [Bacillus cereus BDRD-Cer4]
gi|228671564|gb|EEL26862.1| Shikimate dehydrogenase [Bacillus cereus Rock1-15]
gi|228723285|gb|EEL74655.1| Shikimate dehydrogenase [Bacillus cereus AH676]
gi|228799083|gb|EEM46053.1| Shikimate dehydrogenase [Bacillus thuringiensis serovar pakistani
str. T13001]
gi|296325879|gb|ADH08807.1| shikimate 5-dehydrogenase [Bacillus thuringiensis BMB171]
gi|363626246|gb|EHL77243.1| shikimate dehydrogenase [Bacillus sp. 7_6_55CFAA_CT2]
gi|401103937|gb|EJQ11914.1| shikimate dehydrogenase [Bacillus cereus BAG3O-2]
gi|401117101|gb|EJQ24939.1| shikimate dehydrogenase [Bacillus cereus BAG4O-1]
gi|401264424|gb|EJR70536.1| shikimate dehydrogenase [Bacillus cereus VD154]
gi|401279646|gb|EJR85568.1| shikimate dehydrogenase [Bacillus cereus VD166]
gi|401290033|gb|EJR95737.1| shikimate dehydrogenase [Bacillus cereus VD200]
Length = 277
Score = 167 bits (422), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 100/290 (34%), Positives = 159/290 (54%), Gaps = 26/290 (8%)
Query: 238 KIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLVDD--VKEFFRTYSGTDFAGFSVG 295
+++G++ NP+GHS P++HN AF H + Y LV++ + E R +GF+V
Sbjct: 3 QLYGVIGNPIGHSLSPVMHNDAFEHLNMDAHYHAFLVEEELLGEAVRGLKALGISGFNVT 62
Query: 296 IPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALRERQGI 355
PHK + DE+ PLA+ IGAVNT++ + DG+L+GYNTD + A++ E
Sbjct: 63 TPHKVAIMEYLDEIDPLARKIGAVNTVVHK--DGRLIGYNTDGIGFVRALQSISNE---- 116
Query: 356 NGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGARVI-IFNRNYERAKALADA----V 410
P+ GK +L+G+GGA RA+ F G + I + NR ++AK L A V
Sbjct: 117 --------PLQGKRILLLGSGGASRAIYFSLADVGVKEIDVANRTVDKAKELIAARTADV 168
Query: 411 SGEALHFEYLHEFFPEKGM--ILANASAIGMEPNSDQSPVPKEALKAYELVFDAVYTPRN 468
+ AL E E E+G I+ + IGM P+ + +P+ +LK +V D +Y P
Sbjct: 169 NSVALSLEKATE---EQGNYDIIIQTTTIGMHPHVEHTPLQICSLKKGTIVSDIIYNPFE 225
Query: 469 TRLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRKLVLEQF 518
T++L EA E GA + +G++MF+ Q F ++TG + M++LV+E+
Sbjct: 226 TKILCEAKEQGAIIQNGIDMFVYQGALAFEMWTGRTPNIERMKQLVIEKL 275
>gi|423673876|ref|ZP_17648815.1| shikimate dehydrogenase [Bacillus cereus VDM062]
gi|401310242|gb|EJS15567.1| shikimate dehydrogenase [Bacillus cereus VDM062]
Length = 277
Score = 166 bits (421), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 98/288 (34%), Positives = 156/288 (54%), Gaps = 22/288 (7%)
Query: 238 KIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLVDD--VKEFFRTYSGTDFAGFSVG 295
+++G++ NP+GHS P++HN AF H + Y LV++ + E + +GF+V
Sbjct: 3 QLYGVIGNPIGHSLSPVMHNDAFEHLNMDAHYYAFLVEEEALGEAVKGLKALGISGFNVT 62
Query: 296 IPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALRERQGI 355
PHK + DE+ PLA+ IGAVNT++ R DGKL+GYNTD + A++ +
Sbjct: 63 TPHKVAIMEYLDEIAPLARQIGAVNTVVHR--DGKLIGYNTDGIGFVRALQSISED---- 116
Query: 356 NGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGARVI-IFNRNYERAKALADA----V 410
P+ K +L+GAGGA RA+ F G + I I NR ++AK L V
Sbjct: 117 --------PLQEKRILLIGAGGASRAIYFSLADVGVKEIDIANRTRDKAKNLISGCMANV 168
Query: 411 SGEALHFEYLHEFFPEKGMILANASAIGMEPNSDQSPVPKEALKAYELVFDAVYTPRNTR 470
+ AL E E E +I+ + IGM P+ + +P+ +LK +V D +Y P T+
Sbjct: 169 NSHALSLECAAENQGEYDIII-QTTTIGMHPHVEYTPLEIRSLKQGTIVSDIIYNPFETK 227
Query: 471 LLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRKLVLEQF 518
+L +A E GA + +G++MF+ Q F ++TG + D M++LV+ +
Sbjct: 228 ILGDAKEQGAIIQNGIDMFVYQGALAFEMWTGCVPNIDRMKQLVMREL 275
>gi|337287267|ref|YP_004626740.1| shikimate 5-dehydrogenase [Thermodesulfatator indicus DSM 15286]
gi|335360095|gb|AEH45776.1| shikimate 5-dehydrogenase [Thermodesulfatator indicus DSM 15286]
Length = 273
Score = 166 bits (421), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 102/275 (37%), Positives = 152/275 (55%), Gaps = 23/275 (8%)
Query: 240 FGLVSNPVGHSKGPILHNPAFRHTRFNGIY--VPMLVDDVKEFFRTYSGTDFAGFSVGIP 297
+G++ PV HS P +HN AF+ +Y +P+ +++ E + + G SV +P
Sbjct: 4 YGIIGWPVAHSLSPAMHNAAFKSLGIRAVYGLLPLAPENLAEGIKGIRALNIKGVSVTVP 63
Query: 298 HKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALRERQGING 357
HKE + DE+ P+A IGAVNTI+ + DG+L+G+NTD A+E+ +
Sbjct: 64 HKETVMPLLDEIDPVASEIGAVNTIVNK--DGRLLGFNTDWIGVKKALEEKI-------- 113
Query: 358 VASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGARVIIFNRNYERAKALADAVSGEALHF 417
I+G+ V+VGAGGA +A+ + GA V I+NR +E+AK LA + G AL +
Sbjct: 114 ------AISGQKAVVVGAGGAAKAVVYALIKEGASVAIYNRTFEKAKRLAQTLGGVALPW 167
Query: 418 EYLHEFFPEKGMILANASAIGMEPNSDQSPVPKEALKAYELVFDAVYTPRNTRLLREAAE 477
E E G IL +++G++ D+SPVPKE L ++LV D VY P TRLLREA E
Sbjct: 168 E---ELASASGDILIQTTSVGLK--EDKSPVPKEVLSRFKLVMDIVYQPLKTRLLREAEE 222
Query: 478 VGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRK 512
G + G+ M + Q + QF L+ G MR+
Sbjct: 223 AGCETIDGLSMLVYQGIEQFYLWFGARPQASLMRE 257
>gi|229006675|ref|ZP_04164309.1| Shikimate dehydrogenase [Bacillus mycoides Rock1-4]
gi|228754536|gb|EEM03947.1| Shikimate dehydrogenase [Bacillus mycoides Rock1-4]
Length = 277
Score = 166 bits (421), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 99/290 (34%), Positives = 159/290 (54%), Gaps = 26/290 (8%)
Query: 238 KIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLVDD--VKEFFRTYSGTDFAGFSVG 295
+++G++ NP+GHS P++HN AF + + Y LV++ + E + +GF+V
Sbjct: 3 QLYGVIGNPIGHSLSPLMHNDAFEYLNIDAHYHAFLVEEETLGEAVKGLKALGVSGFNVT 62
Query: 296 IPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALRERQGI 355
PHK + DE+ PLAK IGAVNT++ R DGKL+GYNTD + +++ +E
Sbjct: 63 TPHKVSIMKYLDEIDPLAKQIGAVNTVVHR--DGKLIGYNTDGIGYVRSLQSISKE---- 116
Query: 356 NGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGARVI-IFNRNYERAKALADA----V 410
P+ K +L+GAGGA RA+ F G + I I NR E+A L +
Sbjct: 117 --------PLYQKRILLLGAGGACRAIYFSLADAGVKEIDIANRTVEKANHLLSGCQAKI 168
Query: 411 SGEALHFEYLHEFFPEKGM--ILANASAIGMEPNSDQSPVPKEALKAYELVFDAVYTPRN 468
+ +AL E E E+G I+ + + IGM P+ +P+ ++LK +V D +Y P
Sbjct: 169 TSQALSLEQATE---EQGNYDIIIHTTTIGMHPHIQNTPLQIQSLKQGTIVSDIIYNPFE 225
Query: 469 TRLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRKLVLEQF 518
T+LL++A GA V +G++MF+ Q F L+TG + + M++LV+ +
Sbjct: 226 TKLLQDAKAKGAIVQNGIDMFVYQGALAFELWTGRMPNIEKMKQLVMRKL 275
>gi|229198462|ref|ZP_04325166.1| Shikimate dehydrogenase [Bacillus cereus m1293]
gi|423573986|ref|ZP_17550105.1| shikimate dehydrogenase [Bacillus cereus MSX-D12]
gi|423604016|ref|ZP_17579909.1| shikimate dehydrogenase [Bacillus cereus VD102]
gi|228584965|gb|EEK43079.1| Shikimate dehydrogenase [Bacillus cereus m1293]
gi|401212555|gb|EJR19298.1| shikimate dehydrogenase [Bacillus cereus MSX-D12]
gi|401245702|gb|EJR52055.1| shikimate dehydrogenase [Bacillus cereus VD102]
Length = 277
Score = 166 bits (420), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 100/288 (34%), Positives = 153/288 (53%), Gaps = 22/288 (7%)
Query: 238 KIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLVDD--VKEFFRTYSGTDFAGFSVG 295
+++G++ NP+GHS P++HN AF H + Y LV + + E R +GF+V
Sbjct: 3 QLYGVIGNPIGHSLSPVMHNDAFEHLNMDAYYHAFLVKEEVLGEAVRGLKALGISGFNVT 62
Query: 296 IPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALRERQGI 355
PHK + DE+ PLAK IGAVNT++ + DGKL+GYNTD + A++ E
Sbjct: 63 TPHKVAIMDYLDEIDPLAKQIGAVNTVVHK--DGKLIGYNTDGIGFVKALQSISSE---- 116
Query: 356 NGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGARVI-IFNRNYERAKALADA----V 410
P+ K +L+GAGGA RA+ F G + I + NR ++AK L A V
Sbjct: 117 --------PLQEKRILLLGAGGASRAIYFSLADVGVKEIDVANRTVDKAKELITACTATV 168
Query: 411 SGEALHFEYLHEFFPEKGMILANASAIGMEPNSDQSPVPKEALKAYELVFDAVYTPRNTR 470
AL E E E I+ + IGM P + +P+ +LK +V D +Y P T+
Sbjct: 169 HSVALSLEEATEE-QENYDIIIQTTTIGMHPRVEHTPLQISSLKKGTIVSDIIYNPFETK 227
Query: 471 LLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRKLVLEQF 518
+L EA E GA + +G++MF+ Q F ++TG + + M++LV+ +
Sbjct: 228 ILCEAKEQGAIIQNGIDMFVYQGALAFEMWTGCVPNIERMKQLVIRKL 275
>gi|229163283|ref|ZP_04291237.1| Shikimate dehydrogenase [Bacillus cereus R309803]
gi|228620190|gb|EEK77062.1| Shikimate dehydrogenase [Bacillus cereus R309803]
Length = 277
Score = 166 bits (420), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 100/288 (34%), Positives = 156/288 (54%), Gaps = 22/288 (7%)
Query: 238 KIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLVDD--VKEFFRTYSGTDFAGFSVG 295
+++G++ NP+GHS P++HN AF H + Y LV++ + E R +GF+V
Sbjct: 3 QLYGVIGNPIGHSLSPVMHNDAFEHLNMDAHYHAFLVEEEVLGEAVRGLKALGISGFNVT 62
Query: 296 IPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALRERQGI 355
PHK + DE+ PLA IGAVNT++ + DGKL+GYNTD + A++ E
Sbjct: 63 TPHKVAIMEYLDEIDPLAMQIGAVNTVVHK--DGKLIGYNTDGIGFVRALQSISSE---- 116
Query: 356 NGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGARVI-IFNRNYERAKALADA----V 410
P+ GK +L+GAGGA RA+ F G + I + NR ++A+ L A V
Sbjct: 117 --------PLQGKRILLLGAGGASRAIYFSLADIGVKEIDVANRTVDKAEELIAACKAHV 168
Query: 411 SGEALHFEYLHEFFPEKGMILANASAIGMEPNSDQSPVPKEALKAYELVFDAVYTPRNTR 470
+ AL E E E I+ + IGM P + +P+ +LK +V D +Y P T+
Sbjct: 169 TSVALSLEKATEE-QENYDIIIQTTTIGMHPYVEHTPLQICSLKKGTIVSDIIYNPFETK 227
Query: 471 LLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRKLVLEQF 518
+L EA E GA + +G++MF+ Q F ++TG + D M++LV+++
Sbjct: 228 ILCEAKEQGAIIQNGIDMFVYQGALAFEMWTGRIPNIDRMKQLVIKKL 275
>gi|423400819|ref|ZP_17377992.1| shikimate dehydrogenase [Bacillus cereus BAG2X1-2]
gi|423478476|ref|ZP_17455191.1| shikimate dehydrogenase [Bacillus cereus BAG6X1-1]
gi|401653809|gb|EJS71352.1| shikimate dehydrogenase [Bacillus cereus BAG2X1-2]
gi|402428638|gb|EJV60735.1| shikimate dehydrogenase [Bacillus cereus BAG6X1-1]
Length = 277
Score = 166 bits (420), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 102/290 (35%), Positives = 155/290 (53%), Gaps = 26/290 (8%)
Query: 238 KIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLVDD--VKEFFRTYSGTDFAGFSVG 295
+++G++ NP+GHS P++HN AF H + Y LV + + E R +GF+V
Sbjct: 3 QLYGVIGNPIGHSLSPVMHNDAFEHLNMDAHYHAFLVKEEVLGEAVRGLKALGISGFNVT 62
Query: 296 IPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALRERQGI 355
PHK + DE+ PLAK IGAVNT++ DGKL+GYNTD + A++ E
Sbjct: 63 TPHKVAIMDYLDEIDPLAKKIGAVNTVVHN--DGKLIGYNTDGIGFVRALQSISSE---- 116
Query: 356 NGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGARVI-IFNRNYERAKALADA----V 410
P+ K +L+GAGGA RA+ F G + I + NR ++AK L A V
Sbjct: 117 --------PLQEKRILLLGAGGASRAIYFSLADVGVKEIDVANRTVDKAKELIAACTATV 168
Query: 411 SGEALHFEYLHEFFPEKGM--ILANASAIGMEPNSDQSPVPKEALKAYELVFDAVYTPRN 468
+ AL E E E+G I+ + IGM P + +P+ +LK +V D +Y P
Sbjct: 169 NSVALSLEKATE---EQGNYDIIIQTTTIGMHPRVEHTPLQISSLKKGTIVSDIIYNPFE 225
Query: 469 TRLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRKLVLEQF 518
T++L EA E GA + +G++MF+ Q F ++TG + D M++LV+ +
Sbjct: 226 TKILCEAKEQGAMIQNGIDMFVYQGALAFEMWTGRVPNIDRMKQLVIRKL 275
>gi|218899502|ref|YP_002447913.1| shikimate 5-dehydrogenase [Bacillus cereus G9842]
gi|228967401|ref|ZP_04128434.1| Shikimate dehydrogenase [Bacillus thuringiensis serovar sotto str.
T04001]
gi|402564189|ref|YP_006606913.1| shikimate 5-dehydrogenase [Bacillus thuringiensis HD-771]
gi|226724115|sp|B7IYI7.1|AROE_BACC2 RecName: Full=Shikimate dehydrogenase
gi|218543181|gb|ACK95575.1| shikimate 5-dehydrogenase [Bacillus cereus G9842]
gi|228792289|gb|EEM39858.1| Shikimate dehydrogenase [Bacillus thuringiensis serovar sotto str.
T04001]
gi|401792841|gb|AFQ18880.1| shikimate 5-dehydrogenase [Bacillus thuringiensis HD-771]
Length = 277
Score = 166 bits (420), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 100/290 (34%), Positives = 159/290 (54%), Gaps = 26/290 (8%)
Query: 238 KIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLVDD--VKEFFRTYSGTDFAGFSVG 295
+++G++ NP+GHS P++HN AF H + Y LV++ + E R +GF+V
Sbjct: 3 QLYGVIGNPIGHSLSPVMHNNAFEHLNMDAHYHAFLVEEEVLGEAVRGLKALGISGFNVT 62
Query: 296 IPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALRERQGI 355
PHK + DE+ PLA+ IGAVNT++ + +G+L+GYNTD + A++ E
Sbjct: 63 TPHKVAIMEYLDEIDPLARKIGAVNTVVHK--NGRLIGYNTDGIGFVRALQSISHE---- 116
Query: 356 NGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGARVI-IFNRNYERAKALADA----V 410
P+ GK +L+GAGGA RA+ F G + I + NR ++AK L A V
Sbjct: 117 --------PLQGKRILLLGAGGASRAIYFSLADVGVKEIDVANRTVDKAKELIAARTADV 168
Query: 411 SGEALHFEYLHEFFPEKGM--ILANASAIGMEPNSDQSPVPKEALKAYELVFDAVYTPRN 468
+ AL E E E+G I+ + IGM P+ + +P+ +LK +V D +Y P
Sbjct: 169 NSVALSLEKATE---EQGNYDIIIQTTTIGMHPHVEHTPLQICSLKKGTIVSDIIYNPFE 225
Query: 469 TRLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRKLVLEQF 518
T++L EA E GA + +G++MF+ Q F ++TG + M++LV+E+
Sbjct: 226 TKILCEAKEQGAIIQNGIDMFVYQGALAFEMWTGSVPNIGRMKQLVIEKL 275
>gi|423650199|ref|ZP_17625769.1| shikimate dehydrogenase [Bacillus cereus VD169]
gi|401282617|gb|EJR88516.1| shikimate dehydrogenase [Bacillus cereus VD169]
Length = 277
Score = 166 bits (420), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 100/290 (34%), Positives = 159/290 (54%), Gaps = 26/290 (8%)
Query: 238 KIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLVDD--VKEFFRTYSGTDFAGFSVG 295
+++G++ NP+GHS P++HN AF H + Y LV++ + E R +GF+V
Sbjct: 3 QLYGVIGNPIGHSLSPVMHNDAFEHLNMDAHYHAFLVEEELLGEAVRGLKALGISGFNVT 62
Query: 296 IPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALRERQGI 355
PHK + DE+ PLA+ IGAVNT++ + DG+L+GYNTD + A++ E
Sbjct: 63 TPHKVAIMEYLDEIDPLARKIGAVNTVVHK--DGRLIGYNTDGIGFVRALQSISNE---- 116
Query: 356 NGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGARVI-IFNRNYERAKALADA----V 410
P+ GK +L+G+GGA RA+ F G + I + NR ++AK L A V
Sbjct: 117 --------PLQGKRILLLGSGGASRAIYFSLADVGVKEIDVANRTVDKAKELIAARTADV 168
Query: 411 SGEALHFEYLHEFFPEKGM--ILANASAIGMEPNSDQSPVPKEALKAYELVFDAVYTPRN 468
+ AL E E E+G I+ + IGM P+ + +P+ +LK +V D +Y P
Sbjct: 169 NSVALSLEKATE---EQGNYDIIIQTTTIGMHPHVEHTPLQICSLKKGMIVSDIIYNPFE 225
Query: 469 TRLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRKLVLEQF 518
T++L EA E GA + +G++MF+ Q F ++TG + M++LV+E+
Sbjct: 226 TKILCEAKEQGAIIQNGIDMFVYQGALAFEMWTGRTPNIERMKQLVIEKL 275
>gi|229175009|ref|ZP_04302528.1| Shikimate dehydrogenase [Bacillus cereus MM3]
gi|423457417|ref|ZP_17434214.1| shikimate dehydrogenase [Bacillus cereus BAG5X2-1]
gi|228608470|gb|EEK65773.1| Shikimate dehydrogenase [Bacillus cereus MM3]
gi|401147801|gb|EJQ55294.1| shikimate dehydrogenase [Bacillus cereus BAG5X2-1]
Length = 277
Score = 166 bits (420), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 102/290 (35%), Positives = 156/290 (53%), Gaps = 26/290 (8%)
Query: 238 KIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLVDD--VKEFFRTYSGTDFAGFSVG 295
+++G++ NP+GHS P++HN AF H + Y LV + + E R +GF+V
Sbjct: 3 QLYGVIGNPIGHSLSPVMHNDAFEHLNMDAHYHAFLVKEEVLGEAVRGLKALGISGFNVT 62
Query: 296 IPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALRERQGI 355
PHK + DE+ PLAK IGAVNT++ + DGKL+GYNTD + A++ E
Sbjct: 63 TPHKVAIMDYLDEIDPLAKQIGAVNTVVHK--DGKLIGYNTDGIGFVRALQSISSE---- 116
Query: 356 NGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGARVI-IFNRNYERAKALADA----V 410
P+ K +L+GAGGA RA+ F G + I + NR ++AK L A V
Sbjct: 117 --------PLQEKRILLLGAGGASRAIYFSLADVGVKEIDVANRTADKAKELIAACTATV 168
Query: 411 SGEALHFEYLHEFFPEKGM--ILANASAIGMEPNSDQSPVPKEALKAYELVFDAVYTPRN 468
+ AL E E E+G I+ + IGM P + +P+ +LK +V D +Y P
Sbjct: 169 NSVALSLEKATE---EQGNYDIIIQTTTIGMHPRVEYTPLQISSLKKGTIVSDIIYNPFE 225
Query: 469 TRLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRKLVLEQF 518
T++L EA E GA + +G++MF+ Q F ++TG + D M++LV+ +
Sbjct: 226 TKILCEAKEQGAMIQNGIDMFVYQGALAFEMWTGRVPNIDRMKQLVIRKL 275
>gi|229135160|ref|ZP_04263960.1| Shikimate dehydrogenase [Bacillus cereus BDRD-ST196]
gi|228648288|gb|EEL04323.1| Shikimate dehydrogenase [Bacillus cereus BDRD-ST196]
Length = 277
Score = 166 bits (420), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 98/288 (34%), Positives = 157/288 (54%), Gaps = 22/288 (7%)
Query: 238 KIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLVDD--VKEFFRTYSGTDFAGFSVG 295
+++G++ NP+GHS P++HN AF H + Y LV++ + E + +GF+V
Sbjct: 3 QLYGVIGNPIGHSLSPVMHNDAFEHLNMDAHYHAFLVEEEALGEAVKGLKALGISGFNVT 62
Query: 296 IPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALRERQGI 355
PHK + DE+ PLA+ IGAVNT++ R DGKL+GYNTD + A++ +
Sbjct: 63 TPHKVAIMEYLDEIAPLARQIGAVNTVVHR--DGKLIGYNTDGIGFVRALQSISED---- 116
Query: 356 NGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGARVI-IFNRNYERAKAL----ADAV 410
P+ K +L+GAGGA RA+ F G + I I NR ++AK L + V
Sbjct: 117 --------PLQEKRILLIGAGGASRAIYFSLADVGVKEIDIANRTRDKAKNLISGCMENV 168
Query: 411 SGEALHFEYLHEFFPEKGMILANASAIGMEPNSDQSPVPKEALKAYELVFDAVYTPRNTR 470
+ AL E E E +I+ + IGM P+ + +P+ +LK +V D +Y P T+
Sbjct: 169 NSHALSLECAAENQGEYDIII-QTTTIGMHPHVEYTPLEIRSLKQGTIVSDIIYNPFETK 227
Query: 471 LLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRKLVLEQF 518
+L +A E GA + +G++MF+ Q F ++TG + D M++LV+ +
Sbjct: 228 ILGDAKEQGAIIQNGIDMFVYQGALAFEMWTGCVPNIDRMKQLVMREL 275
>gi|423561197|ref|ZP_17537473.1| shikimate dehydrogenase [Bacillus cereus MSX-A1]
gi|401201454|gb|EJR08319.1| shikimate dehydrogenase [Bacillus cereus MSX-A1]
Length = 277
Score = 166 bits (419), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 100/290 (34%), Positives = 159/290 (54%), Gaps = 26/290 (8%)
Query: 238 KIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLVDD--VKEFFRTYSGTDFAGFSVG 295
+++G++ NP+GHS P++HN AF H + Y LV++ + E R +GF+V
Sbjct: 3 QLYGVIGNPIGHSLSPVMHNNAFEHLNMDAHYHAFLVEEEVLGEAVRGLKALGISGFNVT 62
Query: 296 IPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALRERQGI 355
PHK + DE+ PLA+ IGAVNT++ + +G+L+GYNTD + A++ E
Sbjct: 63 TPHKVAIMEYLDEIDPLARKIGAVNTVVHK--NGRLIGYNTDGIGFVRALQSISHE---- 116
Query: 356 NGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGAR-VIIFNRNYERAKALADA----V 410
P+ GK +L+GAGGA RA+ F G + V + NR ++AK L A V
Sbjct: 117 --------PLQGKRILLLGAGGASRAIYFSLADVGVKEVDVANRTVDKAKELIAARTADV 168
Query: 411 SGEALHFEYLHEFFPEKGM--ILANASAIGMEPNSDQSPVPKEALKAYELVFDAVYTPRN 468
+ AL E E E+G I+ + IGM P+ + +P+ +LK +V D +Y P
Sbjct: 169 NSVALSLEKATE---EQGNYDIIIQTTTIGMHPHVEHTPLQICSLKKGTIVSDIIYNPFE 225
Query: 469 TRLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRKLVLEQF 518
T++L EA E GA + +G++MF+ Q F ++TG + M++LV+E+
Sbjct: 226 TKILCEAKEQGAIIQNGIDMFVYQGALAFEMWTGSVPNIGRMKQLVIEKL 275
>gi|229013555|ref|ZP_04170688.1| Shikimate dehydrogenase [Bacillus mycoides DSM 2048]
gi|229062033|ref|ZP_04199358.1| Shikimate dehydrogenase [Bacillus cereus AH603]
gi|229169082|ref|ZP_04296797.1| Shikimate dehydrogenase [Bacillus cereus AH621]
gi|423519034|ref|ZP_17495515.1| shikimate dehydrogenase [Bacillus cereus HuA2-4]
gi|423591670|ref|ZP_17567701.1| shikimate dehydrogenase [Bacillus cereus VD048]
gi|423598349|ref|ZP_17574349.1| shikimate dehydrogenase [Bacillus cereus VD078]
gi|423660821|ref|ZP_17635990.1| shikimate dehydrogenase [Bacillus cereus VDM022]
gi|423669920|ref|ZP_17644949.1| shikimate dehydrogenase [Bacillus cereus VDM034]
gi|228614310|gb|EEK71420.1| Shikimate dehydrogenase [Bacillus cereus AH621]
gi|228717185|gb|EEL68860.1| Shikimate dehydrogenase [Bacillus cereus AH603]
gi|228747715|gb|EEL97585.1| Shikimate dehydrogenase [Bacillus mycoides DSM 2048]
gi|401160089|gb|EJQ67468.1| shikimate dehydrogenase [Bacillus cereus HuA2-4]
gi|401231803|gb|EJR38305.1| shikimate dehydrogenase [Bacillus cereus VD048]
gi|401236619|gb|EJR43076.1| shikimate dehydrogenase [Bacillus cereus VD078]
gi|401299047|gb|EJS04647.1| shikimate dehydrogenase [Bacillus cereus VDM034]
gi|401300862|gb|EJS06451.1| shikimate dehydrogenase [Bacillus cereus VDM022]
Length = 277
Score = 166 bits (419), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 98/288 (34%), Positives = 156/288 (54%), Gaps = 22/288 (7%)
Query: 238 KIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLVDD--VKEFFRTYSGTDFAGFSVG 295
+++G++ NP+GHS P++HN AF H + Y LV++ + E + +GF+V
Sbjct: 3 QLYGVIGNPIGHSLSPVMHNDAFEHLNMDAHYHAFLVEEEALGEAVKGLKALGISGFNVT 62
Query: 296 IPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALRERQGI 355
PHK + DE+ PLA+ IGAVNT++ R DGKL+GYNTD + A++ +
Sbjct: 63 TPHKVAIMEYLDEIAPLARQIGAVNTVVHR--DGKLIGYNTDGIGFVRALQSISED---- 116
Query: 356 NGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGARVI-IFNRNYERAKALADA----V 410
P+ K +L+GAGGA RA+ F G + I I NR ++AK L V
Sbjct: 117 --------PLQEKRILLIGAGGASRAIYFSLADVGVKEIDIANRTRDKAKNLISGCMANV 168
Query: 411 SGEALHFEYLHEFFPEKGMILANASAIGMEPNSDQSPVPKEALKAYELVFDAVYTPRNTR 470
+ AL E E E +I+ + IGM P+ + +P+ +LK +V D +Y P T+
Sbjct: 169 NSHALSLECAAENQGEYDIII-QTTTIGMHPHVEYTPLEIRSLKQGTIVSDIIYNPFETK 227
Query: 471 LLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRKLVLEQF 518
+L +A E GA + +G++MF+ Q F ++TG + D M++LV+ +
Sbjct: 228 ILGDAKEQGAIIQNGIDMFVYQGALAFEMWTGCVPNIDRMKQLVMREL 275
>gi|406996985|gb|EKE15179.1| hypothetical protein ACD_12C00117G0002 [uncultured bacterium]
Length = 273
Score = 166 bits (419), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 94/289 (32%), Positives = 154/289 (53%), Gaps = 22/289 (7%)
Query: 233 INPDTKIFGLVSNPVGHSKGPILHNPAFR----HTRFNGIYVPMLVDDVKEFFRTYSGTD 288
I+ TKI ++ +PV HS P +HN + +F + + + DV ++
Sbjct: 3 ISAKTKICLIIGDPVTHSLSPAMHNAGYEALGIEDKFVFLGANVNIKDVGVTIQSMRKMG 62
Query: 289 FAGFSVGIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDA 348
G + IPHK + DE+ AK IGAVNT++ + +GKL+G+NTD A+ +E
Sbjct: 63 IHGLTCTIPHKIEVMKLLDEIDDTAKMIGAVNTVLNQ--NGKLIGFNTDWLGAVIPLEK- 119
Query: 349 LRERQGINGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGARVIIFNRNYERAKALAD 408
+ ++ K +++GAGGA RA+ FG R A V IFNR E+A LA
Sbjct: 120 -------------ITTLSEKKVLVLGAGGAARAVIFGMLKRKAMVTIFNRTKEKATKLAK 166
Query: 409 AVSGEALHFEYLHEFFPEKGMILANASAIGMEPNSDQSPVPKEALKAYELVFDAVYTPRN 468
+ + + E + I+ N +++GM+P D++P+ + + ++VFD VY P
Sbjct: 167 EFNCQMTDLKIESEI--KNFDIIINTTSVGMKPLEDKTPISIKFITNKQIVFDIVYVPFE 224
Query: 469 TRLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRKLVLEQ 517
T+LLREA + GA ++ G EM + Q QF ++TG APE+ MR++++ +
Sbjct: 225 TKLLREAKKRGAKIIHGTEMLLHQGTAQFEIYTGHKAPEEVMRRILINK 273
>gi|228954621|ref|ZP_04116645.1| Shikimate dehydrogenase [Bacillus thuringiensis serovar kurstaki
str. T03a001]
gi|229192547|ref|ZP_04319508.1| Shikimate dehydrogenase [Bacillus cereus ATCC 10876]
gi|423426468|ref|ZP_17403499.1| shikimate dehydrogenase [Bacillus cereus BAG3X2-2]
gi|423502980|ref|ZP_17479572.1| shikimate dehydrogenase [Bacillus cereus HD73]
gi|449091298|ref|YP_007423739.1| Shikimate dehydrogenase [Bacillus thuringiensis serovar kurstaki
str. HD73]
gi|228590854|gb|EEK48712.1| Shikimate dehydrogenase [Bacillus cereus ATCC 10876]
gi|228805067|gb|EEM51662.1| Shikimate dehydrogenase [Bacillus thuringiensis serovar kurstaki
str. T03a001]
gi|401111215|gb|EJQ19114.1| shikimate dehydrogenase [Bacillus cereus BAG3X2-2]
gi|402459201|gb|EJV90938.1| shikimate dehydrogenase [Bacillus cereus HD73]
gi|449025055|gb|AGE80218.1| Shikimate dehydrogenase [Bacillus thuringiensis serovar kurstaki
str. HD73]
Length = 277
Score = 166 bits (419), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 100/290 (34%), Positives = 159/290 (54%), Gaps = 26/290 (8%)
Query: 238 KIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLVDD--VKEFFRTYSGTDFAGFSVG 295
+++G++ NP+GHS P++HN AF H + Y LV++ + E R +GF+V
Sbjct: 3 QLYGVIGNPIGHSLSPVMHNDAFEHLNMDAHYHAFLVEEELLGEAVRGLKALGISGFNVT 62
Query: 296 IPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALRERQGI 355
PHK + DE+ PLA+ IGAVNT++ + DG+L+GYNTD + A++ E
Sbjct: 63 TPHKVAIMEYLDEIDPLARKIGAVNTVVHK--DGRLIGYNTDGIGFVRALQSISNE---- 116
Query: 356 NGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGARVI-IFNRNYERAKALADA----V 410
P+ GK +L+G+GGA RA+ F G + I + NR ++AK L A V
Sbjct: 117 --------PLQGKRILLLGSGGASRAIYFSLADVGVKEIDVANRTVDKAKELIAARTADV 168
Query: 411 SGEALHFEYLHEFFPEKGM--ILANASAIGMEPNSDQSPVPKEALKAYELVFDAVYTPRN 468
+ AL E E E+G I+ + IGM P+ + +P+ +LK +V D +Y P
Sbjct: 169 NSVALSLEKATE---EQGNYDIIIQTTTIGMHPHVEYTPLQICSLKKGTIVSDIIYNPFE 225
Query: 469 TRLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRKLVLEQF 518
T++L EA E GA + +G++MF+ Q F ++TG + M++LV+E+
Sbjct: 226 TKILCEAKEQGAIIQNGIDMFVYQGALAFEMWTGRTPNIERMKQLVIEKL 275
>gi|423368385|ref|ZP_17345817.1| shikimate dehydrogenase [Bacillus cereus VD142]
gi|401080712|gb|EJP88996.1| shikimate dehydrogenase [Bacillus cereus VD142]
Length = 277
Score = 166 bits (419), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 98/288 (34%), Positives = 156/288 (54%), Gaps = 22/288 (7%)
Query: 238 KIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLVDD--VKEFFRTYSGTDFAGFSVG 295
+++G++ NP+GHS P++HN AF H + Y LV++ + E + +GF+V
Sbjct: 3 QLYGVIGNPIGHSLSPVMHNDAFEHLNMDAHYHAFLVEEEALGEAVKGLKALGISGFNVT 62
Query: 296 IPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALRERQGI 355
PHK + DE+ PLA+ IGAVNT++ R DGKL+GYNTD + A++ +
Sbjct: 63 TPHKVTIMEYLDEIAPLARQIGAVNTVVHR--DGKLIGYNTDGIGFVRALQSISED---- 116
Query: 356 NGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGARVI-IFNRNYERAKALADA----V 410
P+ K +L+GAGGA RA+ F G + I I NR ++AK L V
Sbjct: 117 --------PLQEKRILLIGAGGASRAIYFSLADVGVKEIDIANRTRDKAKNLISGCMANV 168
Query: 411 SGEALHFEYLHEFFPEKGMILANASAIGMEPNSDQSPVPKEALKAYELVFDAVYTPRNTR 470
+ AL E E E +I+ + IGM P+ + +P+ +LK +V D +Y P T+
Sbjct: 169 NSHALSLECAAENQGEYDIII-QTTTIGMHPHVEYTPLEIRSLKQGTIVSDIIYNPFETK 227
Query: 471 LLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRKLVLEQF 518
+L +A E GA + +G++MF+ Q F ++TG + D M++LV+ +
Sbjct: 228 ILGDAKEQGAIIQNGIDMFVYQGALAFEMWTGCVPNIDRMKQLVMREL 275
>gi|229071841|ref|ZP_04205054.1| Shikimate dehydrogenase [Bacillus cereus F65185]
gi|423437780|ref|ZP_17414761.1| shikimate dehydrogenase [Bacillus cereus BAG4X12-1]
gi|228711271|gb|EEL63233.1| Shikimate dehydrogenase [Bacillus cereus F65185]
gi|401120935|gb|EJQ28731.1| shikimate dehydrogenase [Bacillus cereus BAG4X12-1]
Length = 277
Score = 165 bits (418), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 100/290 (34%), Positives = 158/290 (54%), Gaps = 26/290 (8%)
Query: 238 KIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLVDD--VKEFFRTYSGTDFAGFSVG 295
+++G++ NP+GHS P++HN AF H + Y LV++ + E R +GF+V
Sbjct: 3 QLYGVIGNPIGHSLSPVMHNDAFEHLNMDAHYHAFLVEEELLGEAVRGLKALGISGFNVT 62
Query: 296 IPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALRERQGI 355
PHK + DE+ PLA+ IGAVNT++ + DG+L+GYNTD + A++ E
Sbjct: 63 TPHKVAIMEYLDEIDPLARKIGAVNTVVHK--DGRLIGYNTDGIGFVRALQSISNE---- 116
Query: 356 NGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGARVI-IFNRNYERAKALADA----V 410
P+ GK +L+G+GGA RA+ F G + I + NR +AK L A V
Sbjct: 117 --------PLQGKRILLLGSGGASRAIYFSLADVGVKEIDVANRTVNKAKELIAARTADV 168
Query: 411 SGEALHFEYLHEFFPEKGM--ILANASAIGMEPNSDQSPVPKEALKAYELVFDAVYTPRN 468
+ AL E E E+G I+ + IGM P+ + +P+ +LK +V D +Y P
Sbjct: 169 NSVALSLEKATE---EQGNYDIIIQTTTIGMHPHVEYTPLQICSLKKGTIVSDIIYNPFQ 225
Query: 469 TRLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRKLVLEQF 518
T++L EA E GA + +G++MF+ Q F ++TG + M++LV+E+
Sbjct: 226 TKILCEAKEQGAIIQNGIDMFVYQGALAFEMWTGRTPNIERMKQLVIEKL 275
>gi|423489518|ref|ZP_17466200.1| shikimate dehydrogenase [Bacillus cereus BtB2-4]
gi|423495241|ref|ZP_17471885.1| shikimate dehydrogenase [Bacillus cereus CER057]
gi|423497965|ref|ZP_17474582.1| shikimate dehydrogenase [Bacillus cereus CER074]
gi|401151334|gb|EJQ58786.1| shikimate dehydrogenase [Bacillus cereus CER057]
gi|401161252|gb|EJQ68619.1| shikimate dehydrogenase [Bacillus cereus CER074]
gi|402431754|gb|EJV63818.1| shikimate dehydrogenase [Bacillus cereus BtB2-4]
Length = 278
Score = 165 bits (418), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 98/289 (33%), Positives = 156/289 (53%), Gaps = 23/289 (7%)
Query: 238 KIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLVDD---VKEFFRTYSGTDFAGFSV 294
+++G++ NP+GHS P++HN AF H + Y LV++ + E + +GF+V
Sbjct: 3 QLYGVIGNPIGHSLSPVMHNDAFEHLNMDAHYHAFLVEEEEALGEAVKGLKALGISGFNV 62
Query: 295 GIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALRERQG 354
PHK + DE+ PLA+ IGAVNT++ R DGKL+GYNTD + A++ +
Sbjct: 63 TTPHKVAIMEYLDEIAPLARQIGAVNTVVHR--DGKLIGYNTDGIGFVRALQSISED--- 117
Query: 355 INGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGARVI-IFNRNYERAKALADA---- 409
P+ K +L+GAGGA RA+ F G + I I NR ++AK L
Sbjct: 118 ---------PLQEKRILLIGAGGASRAIYFSLADVGVKEIDIANRTRDKAKNLISGCMAN 168
Query: 410 VSGEALHFEYLHEFFPEKGMILANASAIGMEPNSDQSPVPKEALKAYELVFDAVYTPRNT 469
V+ AL E E E +I+ + IGM P+ + +P+ +LK +V D +Y P T
Sbjct: 169 VNSHALSLECAAENQGEYDIII-QTTTIGMHPHVEYTPLEIRSLKQGTIVSDIIYNPFET 227
Query: 470 RLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRKLVLEQF 518
++L +A E GA + +G++MF+ Q F ++TG + D M++LV+ +
Sbjct: 228 KILGDAKEQGAIIQNGIDMFVYQGALAFEMWTGCVPNIDRMKQLVMREL 276
>gi|229019559|ref|ZP_04176375.1| Shikimate dehydrogenase [Bacillus cereus AH1273]
gi|229025800|ref|ZP_04182199.1| Shikimate dehydrogenase [Bacillus cereus AH1272]
gi|228735508|gb|EEL86104.1| Shikimate dehydrogenase [Bacillus cereus AH1272]
gi|228741725|gb|EEL91909.1| Shikimate dehydrogenase [Bacillus cereus AH1273]
Length = 277
Score = 165 bits (418), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 98/288 (34%), Positives = 157/288 (54%), Gaps = 22/288 (7%)
Query: 238 KIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLVDD--VKEFFRTYSGTDFAGFSVG 295
+++G++ NP+GHS P++HN AF H + Y LV++ + E + +GF+V
Sbjct: 3 QLYGVIGNPIGHSLSPVMHNDAFEHLNMDAHYHAFLVEEAALGEAVKGLKALGISGFNVT 62
Query: 296 IPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALRERQGI 355
PHK + DEV PLA+ IGAVNT++ R DGKL+GYNTD + A++ +E
Sbjct: 63 TPHKVAIMEYLDEVAPLAEQIGAVNTVVHR--DGKLIGYNTDGIGFVRALQSISKE---- 116
Query: 356 NGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGARVI-IFNRNYERAKALADA----V 410
P+ K +L+GAGGA RA+ F G + I I NR ++A+ L V
Sbjct: 117 --------PLQEKRILLLGAGGASRAIYFSLADVGVKAIDIANRTRDKAENLVAGCLANV 168
Query: 411 SGEALHFEYLHEFFPEKGMILANASAIGMEPNSDQSPVPKEALKAYELVFDAVYTPRNTR 470
+ AL E+ + E +I+ + IGM P+ + +P+ +LK +V D +Y P T+
Sbjct: 169 NSHALSLEHAAKAQGEYDIII-QTTTIGMHPHVEHTPLEIRSLKKGAIVSDIIYNPFETK 227
Query: 471 LLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRKLVLEQF 518
+L A E GA + +G++MF+ Q F ++TG + D M++LV+ +
Sbjct: 228 ILGGAKEQGAIIQNGIDMFVYQGALAFEMWTGCVPNIDRMKQLVMREL 275
>gi|228910172|ref|ZP_04073991.1| Shikimate dehydrogenase [Bacillus thuringiensis IBL 200]
gi|423358629|ref|ZP_17336132.1| shikimate dehydrogenase [Bacillus cereus VD022]
gi|228849455|gb|EEM94290.1| Shikimate dehydrogenase [Bacillus thuringiensis IBL 200]
gi|401084501|gb|EJP92747.1| shikimate dehydrogenase [Bacillus cereus VD022]
Length = 277
Score = 165 bits (418), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 100/290 (34%), Positives = 159/290 (54%), Gaps = 26/290 (8%)
Query: 238 KIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLVDD--VKEFFRTYSGTDFAGFSVG 295
+++G++ NP+GHS P++HN AF H + Y LV++ + E R +GF+V
Sbjct: 3 QLYGVIGNPIGHSLSPVMHNNAFEHLNMDAHYHAFLVEEEVLGEAVRGLKALGISGFNVT 62
Query: 296 IPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALRERQGI 355
PHK + DE+ PLA+ IGAVNT++ + +G+L+GYNTD + A++ E
Sbjct: 63 TPHKVAIMEYLDEIDPLARKIGAVNTVVHK--NGRLIGYNTDGIGFVRALQSISHE---- 116
Query: 356 NGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGARVI-IFNRNYERAKALADA----V 410
P+ GK +L+GAGGA RA+ F G + I + NR ++AK L A V
Sbjct: 117 --------PLQGKRILLLGAGGASRAIYFSLADVGVKEIDVANRTVDKAKELIAARTADV 168
Query: 411 SGEALHFEYLHEFFPEKGM--ILANASAIGMEPNSDQSPVPKEALKAYELVFDAVYTPRN 468
+ AL E E E+G I+ + IGM P+ + +P+ +LK +V D +Y P
Sbjct: 169 NSVALSLEKATE---EQGNYDIIIQTTTIGMHPHVEHTPLQICSLKKGTIVSDIIYNPFE 225
Query: 469 TRLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRKLVLEQF 518
T++L EA E GA + +G++MF+ Q F ++TG + M++LV+E+
Sbjct: 226 TKILCEAKEQGAIIQNGIDMFVYQGALAFEMWTGRVPNIGRMKQLVIEKL 275
>gi|229081598|ref|ZP_04214094.1| Shikimate dehydrogenase [Bacillus cereus Rock4-2]
gi|228701704|gb|EEL54194.1| Shikimate dehydrogenase [Bacillus cereus Rock4-2]
Length = 277
Score = 165 bits (418), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 100/290 (34%), Positives = 158/290 (54%), Gaps = 26/290 (8%)
Query: 238 KIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLVDD--VKEFFRTYSGTDFAGFSVG 295
+++G++ NP+GHS P++HN AF H + Y LV++ + E R +GF+V
Sbjct: 3 QLYGVIGNPIGHSLSPVMHNDAFEHLNMDAHYHAFLVEEELLGEAVRGLKALGISGFNVT 62
Query: 296 IPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALRERQGI 355
PHK + DE+ PLA+ IGAVNT++ + DG+L+GYNTD + A++ E
Sbjct: 63 TPHKVAIMEYLDEIDPLARKIGAVNTVVHK--DGRLIGYNTDGIGFVRALQSISNE---- 116
Query: 356 NGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGARVI-IFNRNYERAKALADA----V 410
P+ GK +L+G+GGA RA+ F G + I + NR +AK L A V
Sbjct: 117 --------PLQGKRILLLGSGGASRAIYFSLADVGVKDIDVANRTVNKAKELIAARTADV 168
Query: 411 SGEALHFEYLHEFFPEKGM--ILANASAIGMEPNSDQSPVPKEALKAYELVFDAVYTPRN 468
+ AL E E E+G I+ + IGM P+ + +P+ +LK +V D +Y P
Sbjct: 169 NSVALSLEKATE---EQGNYDIIIQTTTIGMHPHVEYTPLQICSLKKGTIVSDIIYNPFQ 225
Query: 469 TRLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRKLVLEQF 518
T++L EA E GA + +G++MF+ Q F ++TG + M++LV+E+
Sbjct: 226 TKILCEAKEQGAIIQNGIDMFVYQGALAFEMWTGRTPNIERMKQLVIEKL 275
>gi|165873244|ref|ZP_02217854.1| shikimate 5-dehydrogenase [Bacillus anthracis str. A0488]
gi|227817111|ref|YP_002817120.1| shikimate 5-dehydrogenase [Bacillus anthracis str. CDC 684]
gi|254750915|ref|ZP_05202954.1| shikimate 5-dehydrogenase [Bacillus anthracis str. Vollum]
gi|254806730|sp|C3L5T8.1|AROE_BACAC RecName: Full=Shikimate dehydrogenase
gi|164711003|gb|EDR16570.1| shikimate 5-dehydrogenase [Bacillus anthracis str. A0488]
gi|227006413|gb|ACP16156.1| shikimate dehydrogenase [Bacillus anthracis str. CDC 684]
Length = 277
Score = 165 bits (417), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 100/290 (34%), Positives = 156/290 (53%), Gaps = 26/290 (8%)
Query: 238 KIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLVDD--VKEFFRTYSGTDFAGFSVG 295
+++G++ NP+GHS P++HN AF H + + Y LV + + E R +GF+V
Sbjct: 3 RLYGVIGNPIGHSLSPVMHNDAFEHLKMDAHYHAFLVKEEVLGEAVRGLKALGISGFNVT 62
Query: 296 IPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALRERQGI 355
PHK + DE+ PLAK IGAVNT++ + DGKL+GYNTD + A++ E
Sbjct: 63 TPHKVAIMDYLDEIDPLAKQIGAVNTVVHK--DGKLIGYNTDGIGFVRALQSISSE---- 116
Query: 356 NGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGARVI-IFNRNYERAKALADA----V 410
P+ K +L+GAGGA RA+ F G + I + NR ++AK L A V
Sbjct: 117 --------PLQEKRILLLGAGGASRAIYFSLADAGVKEIDVANRTVDKAKELIAACTATV 168
Query: 411 SGEALHFEYLHEFFPEKGM--ILANASAIGMEPNSDQSPVPKEALKAYELVFDAVYTPRN 468
AL E + E+G I+ + IGM P + +P+ +LK +V D +Y P
Sbjct: 169 HSVALSLE---KATKEQGNYDIIIQTTTIGMHPRVEHTPLQISSLKKGTIVSDIIYNPFE 225
Query: 469 TRLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRKLVLEQF 518
T++L EA E GA + +G++MF+ Q F ++TG + + M++LV+ +
Sbjct: 226 TKILCEAKEQGAIIQNGIDMFVYQGALAFEMWTGCVPNIERMKQLVIRKL 275
>gi|389581076|ref|ZP_10171103.1| shikimate 5-dehydrogenase [Desulfobacter postgatei 2ac9]
gi|389402711|gb|EIM64933.1| shikimate 5-dehydrogenase [Desulfobacter postgatei 2ac9]
Length = 266
Score = 165 bits (417), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 104/285 (36%), Positives = 156/285 (54%), Gaps = 24/285 (8%)
Query: 233 INPDTKIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLVDDVKEFFRTYSGTDFAGF 292
I+ T+++ L NP HSKGP++HN AF+ N +Y+ V D + D G
Sbjct: 2 IDAATRLYCLFGNPARHSKGPVIHNAAFKDKDINAVYLAFEVQDAAGAAQAVRTLDIKGA 61
Query: 293 SVGIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALRER 352
SV IP KE + D + P A++IGAVNTI+ +G L GYNTDC++A++ +
Sbjct: 62 SVTIPFKESIMEHIDWIDPTARAIGAVNTIVNE--NGVLKGYNTDCQAAVAPL------- 112
Query: 353 QGINGVASHTSP--IAGKIFVLVGAGGAGRALAFGAKSRGARVIIFNRNYERAKALADAV 410
P I+GK +VGAGGA RA+A G +++ +II NR ++ +ALA+ V
Sbjct: 113 ----------VPFGISGKTVCIVGAGGAARAVAHGIEAQNGDIIITNRTEQKGRALAETV 162
Query: 411 SGEALHFEYLHEFFPEKGMILANASAIGMEPNSDQSPVPKEALKAYELVFDAVYTPRNTR 470
+ + E + + ++ N ++IGM P ++ P EAL++ +V D VYTP TR
Sbjct: 163 NARFIPAEEMENI---QADVIINTTSIGMTPKENEISFPPEALRSEMVVMDVVYTPLRTR 219
Query: 471 LLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRKLVL 515
LL A + G T + G+ MFI QA QF L+TG + D MR ++
Sbjct: 220 LLEAAEQKGCTTIDGLSMFIAQAAAQFELWTGIIPDTDLMRNTII 264
>gi|206976069|ref|ZP_03236979.1| shikimate 5-dehydrogenase [Bacillus cereus H3081.97]
gi|217961824|ref|YP_002340394.1| shikimate 5-dehydrogenase [Bacillus cereus AH187]
gi|222097779|ref|YP_002531836.1| shikimate 5-dehydrogenase [Bacillus cereus Q1]
gi|229141072|ref|ZP_04269614.1| Shikimate dehydrogenase [Bacillus cereus BDRD-ST26]
gi|375286341|ref|YP_005106780.1| shikimate 5-dehydrogenase [Bacillus cereus NC7401]
gi|423354827|ref|ZP_17332452.1| shikimate dehydrogenase [Bacillus cereus IS075]
gi|423373787|ref|ZP_17351126.1| shikimate dehydrogenase [Bacillus cereus AND1407]
gi|423570574|ref|ZP_17546819.1| shikimate dehydrogenase [Bacillus cereus MSX-A12]
gi|226726289|sp|B7HPN3.1|AROE_BACC7 RecName: Full=Shikimate dehydrogenase
gi|254806732|sp|B9IYA1.1|AROE_BACCQ RecName: Full=Shikimate dehydrogenase
gi|206745821|gb|EDZ57218.1| shikimate 5-dehydrogenase [Bacillus cereus H3081.97]
gi|217067575|gb|ACJ81825.1| shikimate 5-dehydrogenase [Bacillus cereus AH187]
gi|221241837|gb|ACM14547.1| shikimate 5-dehydrogenase [Bacillus cereus Q1]
gi|228642350|gb|EEK98639.1| Shikimate dehydrogenase [Bacillus cereus BDRD-ST26]
gi|358354868|dbj|BAL20040.1| shikimate 5-dehydrogenase [Bacillus cereus NC7401]
gi|401085831|gb|EJP94065.1| shikimate dehydrogenase [Bacillus cereus IS075]
gi|401095188|gb|EJQ03248.1| shikimate dehydrogenase [Bacillus cereus AND1407]
gi|401203770|gb|EJR10605.1| shikimate dehydrogenase [Bacillus cereus MSX-A12]
Length = 277
Score = 164 bits (416), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 100/288 (34%), Positives = 152/288 (52%), Gaps = 22/288 (7%)
Query: 238 KIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLVDD--VKEFFRTYSGTDFAGFSVG 295
+++G++ NP+GHS P++HN AF H + Y LV + + E R +GF+V
Sbjct: 3 QLYGVIGNPIGHSLSPVMHNDAFEHLNMDAHYHAFLVKEEVLGEAVRGLKALGISGFNVT 62
Query: 296 IPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALRERQGI 355
PHK + DE+ PLAK IGAVNT++ + DGKL+GYNTD + A++ E
Sbjct: 63 TPHKVAIMDYLDEIDPLAKQIGAVNTVVHK--DGKLIGYNTDGIGFVKALQSISSE---- 116
Query: 356 NGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGARVI-IFNRNYERAKALADA----V 410
P+ K +L+GAGGA RA+ F G + I + NR ++AK L A V
Sbjct: 117 --------PLQEKRILLLGAGGASRAIYFSLADVGVKEIDVANRTVDKAKELITACTATV 168
Query: 411 SGEALHFEYLHEFFPEKGMILANASAIGMEPNSDQSPVPKEALKAYELVFDAVYTPRNTR 470
AL E E E I+ + IGM P + +P+ +LK +V D +Y P T+
Sbjct: 169 HSVALSLEEATEE-QENYDIIIQTTTIGMHPRVEHTPLQISSLKKGTIVSDIIYNPFETK 227
Query: 471 LLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRKLVLEQF 518
+L EA E GA + +G++MF+ Q F ++TG + M++LV+ +
Sbjct: 228 ILCEAKEQGAMIQNGIDMFVYQGALAFEMWTGRTPNIERMKQLVIRKL 275
>gi|49187228|ref|YP_030480.1| shikimate 5-dehydrogenase [Bacillus anthracis str. Sterne]
gi|167634541|ref|ZP_02392861.1| shikimate 5-dehydrogenase [Bacillus anthracis str. A0442]
gi|167638665|ref|ZP_02396941.1| shikimate 5-dehydrogenase [Bacillus anthracis str. A0193]
gi|170687435|ref|ZP_02878652.1| shikimate 5-dehydrogenase [Bacillus anthracis str. A0465]
gi|177653290|ref|ZP_02935542.1| shikimate 5-dehydrogenase [Bacillus anthracis str. A0174]
gi|190566996|ref|ZP_03019912.1| shikimate 5-dehydrogenase [Bacillus anthracis str. Tsiankovskii-I]
gi|196034558|ref|ZP_03101967.1| shikimate 5-dehydrogenase [Bacillus cereus W]
gi|228948048|ref|ZP_04110333.1| Shikimate dehydrogenase [Bacillus thuringiensis serovar monterrey
BGSC 4AJ1]
gi|254684091|ref|ZP_05147951.1| shikimate 5-dehydrogenase [Bacillus anthracis str. CNEVA-9066]
gi|254721925|ref|ZP_05183714.1| shikimate 5-dehydrogenase [Bacillus anthracis str. A1055]
gi|254736439|ref|ZP_05194145.1| shikimate 5-dehydrogenase [Bacillus anthracis str. Western North
America USA6153]
gi|254741476|ref|ZP_05199163.1| shikimate 5-dehydrogenase [Bacillus anthracis str. Kruger B]
gi|254757757|ref|ZP_05209784.1| shikimate 5-dehydrogenase [Bacillus anthracis str. Australia 94]
gi|421506588|ref|ZP_15953511.1| shikimate 5-dehydrogenase [Bacillus anthracis str. UR-1]
gi|421638409|ref|ZP_16079005.1| shikimate 5-dehydrogenase [Bacillus anthracis str. BF1]
gi|49181155|gb|AAT56531.1| shikimate 5-dehydrogenase [Bacillus anthracis str. Sterne]
gi|167513513|gb|EDR88883.1| shikimate 5-dehydrogenase [Bacillus anthracis str. A0193]
gi|167529993|gb|EDR92728.1| shikimate 5-dehydrogenase [Bacillus anthracis str. A0442]
gi|170668630|gb|EDT19376.1| shikimate 5-dehydrogenase [Bacillus anthracis str. A0465]
gi|172081572|gb|EDT66644.1| shikimate 5-dehydrogenase [Bacillus anthracis str. A0174]
gi|190561987|gb|EDV15956.1| shikimate 5-dehydrogenase [Bacillus anthracis str. Tsiankovskii-I]
gi|195993100|gb|EDX57059.1| shikimate 5-dehydrogenase [Bacillus cereus W]
gi|228811634|gb|EEM57970.1| Shikimate dehydrogenase [Bacillus thuringiensis serovar monterrey
BGSC 4AJ1]
gi|401823581|gb|EJT22728.1| shikimate 5-dehydrogenase [Bacillus anthracis str. UR-1]
gi|403394835|gb|EJY92075.1| shikimate 5-dehydrogenase [Bacillus anthracis str. BF1]
Length = 277
Score = 164 bits (416), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 100/290 (34%), Positives = 156/290 (53%), Gaps = 26/290 (8%)
Query: 238 KIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLVDD--VKEFFRTYSGTDFAGFSVG 295
+++G++ NP+GHS P++HN AF H + + Y LV + + E R +GF+V
Sbjct: 3 QLYGVIGNPIGHSLSPVMHNDAFEHLKMDAHYHAFLVKEEVLGEAVRGLKALGISGFNVT 62
Query: 296 IPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALRERQGI 355
PHK + DE+ PLAK IGAVNT++ + DGKL+GYNTD + A++ E
Sbjct: 63 TPHKVAIMDYLDEIDPLAKQIGAVNTVVHK--DGKLIGYNTDGIGFVRALQSISSE---- 116
Query: 356 NGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGARVI-IFNRNYERAKALADA----V 410
P+ K +L+GAGGA RA+ F G + I + NR ++AK L A V
Sbjct: 117 --------PLQEKRILLLGAGGASRAIYFSLADAGVKEIDVANRTVDKAKELIAACTATV 168
Query: 411 SGEALHFEYLHEFFPEKGM--ILANASAIGMEPNSDQSPVPKEALKAYELVFDAVYTPRN 468
AL E + E+G I+ + IGM P + +P+ +LK +V D +Y P
Sbjct: 169 HSVALSLE---KATKEQGNYDIIIQTTTIGMHPRVEHTPLQISSLKKGTIVSDIIYNPFE 225
Query: 469 TRLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRKLVLEQF 518
T++L EA E GA + +G++MF+ Q F ++TG + + M++LV+ +
Sbjct: 226 TKILCEAKEQGAIIQNGIDMFVYQGALAFEMWTGCVPNIERMKQLVIRKL 275
>gi|384182154|ref|YP_005567916.1| shikimate 5-dehydrogenase [Bacillus thuringiensis serovar finitimus
YBT-020]
gi|324328238|gb|ADY23498.1| shikimate 5-dehydrogenase [Bacillus thuringiensis serovar finitimus
YBT-020]
Length = 277
Score = 164 bits (416), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 100/288 (34%), Positives = 152/288 (52%), Gaps = 22/288 (7%)
Query: 238 KIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLVDD--VKEFFRTYSGTDFAGFSVG 295
+++G++ NP+GHS P++HN AF H + Y LV + + E R +GF+V
Sbjct: 3 QLYGVIGNPIGHSLSPVMHNDAFEHLNMDAHYHAFLVKEEVLGEAVRGLKALGISGFNVT 62
Query: 296 IPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALRERQGI 355
PHK + DE+ PLAK IGAVNT++ + DGKL+GYNTD + A++ E
Sbjct: 63 TPHKVAIMDYLDEIDPLAKQIGAVNTVVHK--DGKLIGYNTDGIGFVRALQSISSE---- 116
Query: 356 NGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGARVI-IFNRNYERAKALADA----V 410
P+ K +L+GAGGA RA+ F G + I + NR ++AK L A V
Sbjct: 117 --------PLQEKRILLLGAGGASRAIYFSLADVGVKEIDVANRTVDKAKELITACMATV 168
Query: 411 SGEALHFEYLHEFFPEKGMILANASAIGMEPNSDQSPVPKEALKAYELVFDAVYTPRNTR 470
AL E E E I+ + IGM P + +P+ +LK +V D +Y P T+
Sbjct: 169 HSVALSLEKATEE-QENYDIIIQTTTIGMHPRVEHTPLQISSLKKGTIVSDIIYNPFETK 227
Query: 471 LLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRKLVLEQF 518
+L EA E GA + +G++MF+ Q F ++TG + M++LV+ +
Sbjct: 228 ILCEAKEQGAMIQNGIDMFVYQGALAFEMWTGRTPNIERMKQLVIRKL 275
>gi|229157949|ref|ZP_04286021.1| Shikimate dehydrogenase [Bacillus cereus ATCC 4342]
gi|228625509|gb|EEK82264.1| Shikimate dehydrogenase [Bacillus cereus ATCC 4342]
Length = 277
Score = 164 bits (416), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 101/288 (35%), Positives = 151/288 (52%), Gaps = 22/288 (7%)
Query: 238 KIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLVDD--VKEFFRTYSGTDFAGFSVG 295
+++G++ NP+GHS P++HN AF H + Y LV + + E R +GF+V
Sbjct: 3 QLYGVIGNPIGHSLSPVMHNDAFEHLNMDAHYHAFLVKEEVLGEAVRGLKALGISGFNVT 62
Query: 296 IPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALRERQGI 355
PHK + DE+ PLAK IGAVNT++ + DGKL+GYNTD + A++ E
Sbjct: 63 TPHKVAIMNYLDEIDPLAKQIGAVNTVVHK--DGKLIGYNTDGIGFVRALQSISSE---- 116
Query: 356 NGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGARVI-IFNRNYERAKALADA----V 410
P+ K +L+GAGGA RA+ F G R I + NR ++AK L A V
Sbjct: 117 --------PLQEKRILLLGAGGASRAIYFSLADVGVREIDVANRTVDKAKELIAACTATV 168
Query: 411 SGEALHFEYLHEFFPEKGMILANASAIGMEPNSDQSPVPKEALKAYELVFDAVYTPRNTR 470
AL E E E I+ + IGM P +P+ +LK +V D +Y P T+
Sbjct: 169 HSVALSLEKATEE-QENYDIIIQTTTIGMHPRVQHTPLQISSLKKGTIVSDIIYNPFETK 227
Query: 471 LLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRKLVLEQF 518
+L EA E GA + +G++MF+ Q F ++TG + M++LV+ +
Sbjct: 228 ILCEAKEQGAMIQNGIDMFVYQGALAFEMWTGRTPNIERMKQLVIRKL 275
>gi|229031985|ref|ZP_04187970.1| Shikimate dehydrogenase [Bacillus cereus AH1271]
gi|228729340|gb|EEL80332.1| Shikimate dehydrogenase [Bacillus cereus AH1271]
Length = 277
Score = 164 bits (416), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 101/290 (34%), Positives = 154/290 (53%), Gaps = 26/290 (8%)
Query: 238 KIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLVDD--VKEFFRTYSGTDFAGFSVG 295
+++G++ NP+GHS P++HN AF H + Y LV + + E R +GF+V
Sbjct: 3 QLYGVIGNPIGHSLSPVMHNDAFEHLNMDAHYHAFLVKEEVLGEAVRGLKALGISGFNVT 62
Query: 296 IPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALRERQGI 355
PHK + D++ PLAK IGAVNT++ + DGKL+GYNTD + A++ E
Sbjct: 63 TPHKVAIMDYLDKIDPLAKKIGAVNTVVHK--DGKLIGYNTDGIGFVRALQSISSE---- 116
Query: 356 NGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGARVI-IFNRNYERAKAL----ADAV 410
P+ K +L+GAGGA RA+ F G + I + NR ++AK L V
Sbjct: 117 --------PLQEKRILLLGAGGASRAIYFSLADVGVKEIDVANRTVDKAKELIASCTATV 168
Query: 411 SGEALHFEYLHEFFPEKGM--ILANASAIGMEPNSDQSPVPKEALKAYELVFDAVYTPRN 468
AL E E E+G I+ + IGM P + +P+ +LK +V D +Y P
Sbjct: 169 HSVALSLEKATE---EQGNYDIIIQTTTIGMHPRVEHTPLQISSLKKGTIVSDIIYNPFE 225
Query: 469 TRLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRKLVLEQF 518
T++L EA E GA V +G++MF+ Q F ++TG + D M++LV+ +
Sbjct: 226 TKILCEAKEQGAVVQNGIDMFVYQGALAFEMWTGCVPNIDRMKQLVIRKL 275
>gi|423389348|ref|ZP_17366574.1| shikimate dehydrogenase [Bacillus cereus BAG1X1-3]
gi|401641439|gb|EJS59156.1| shikimate dehydrogenase [Bacillus cereus BAG1X1-3]
Length = 277
Score = 164 bits (416), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 98/288 (34%), Positives = 156/288 (54%), Gaps = 22/288 (7%)
Query: 238 KIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLVDD--VKEFFRTYSGTDFAGFSVG 295
+++G++ NP+GHS P++HN AF H + Y LV++ + E + +GF+V
Sbjct: 3 QLYGVIGNPIGHSLSPVMHNDAFEHLNMDAHYHAFLVEEAALGEAVKGLKALGISGFNVT 62
Query: 296 IPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALRERQGI 355
PHK + DEV PLAK IGAVNT++ R DGKL+GYNTD + A++ +E
Sbjct: 63 TPHKVAIMEYLDEVAPLAKQIGAVNTVVHR--DGKLIGYNTDGIGFVRALQSISKE---- 116
Query: 356 NGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGARVI-IFNRNYERAKALADA----V 410
P+ K +L+GAGGA RA+ F G + I I NR ++A+ L V
Sbjct: 117 --------PLQEKRILLLGAGGASRAIYFSLADVGVKAIDIANRTRDKAENLVAGCLANV 168
Query: 411 SGEALHFEYLHEFFPEKGMILANASAIGMEPNSDQSPVPKEALKAYELVFDAVYTPRNTR 470
+ AL E + E +I+ + IGM P+ + +P+ +LK +V D +Y P T+
Sbjct: 169 NSHALSLEQAAKAQGEYDIII-QTTTIGMHPHVEHTPLEIRSLKKGAIVSDIIYNPFETK 227
Query: 471 LLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRKLVLEQF 518
+L +A E GA + +G++MF+ Q F ++T + D M++LV+ +
Sbjct: 228 ILGDAKEQGAIIQNGIDMFVYQGALAFEMWTECVPNIDRMKQLVMREL 275
>gi|62319331|dbj|BAD94599.1| putative dehydroquinase shikimate dehydrogenase [Arabidopsis
thaliana]
Length = 139
Score = 164 bits (416), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 77/136 (56%), Positives = 103/136 (75%)
Query: 379 GRALAFGAKSRGARVIIFNRNYERAKALADAVSGEALHFEYLHEFFPEKGMILANASAIG 438
G+ALA+GAK +GA+V+I NR YERA LA+A+ G+AL L + PE GM+LAN +++G
Sbjct: 1 GKALAYGAKEKGAKVVIANRTYERALKLAEAIGGKALSLTDLDNYHPEDGMVLANTTSMG 60
Query: 439 MEPNSDQSPVPKEALKAYELVFDAVYTPRNTRLLREAAEVGATVVSGVEMFIRQALGQFR 498
M+PN +++P+ K+ALK Y LVFDAVYTPR TRLLREA E GA VSG EMF+RQA QF
Sbjct: 61 MQPNVEETPISKDALKHYALVFDAVYTPRITRLLREAEESGAITVSGSEMFVRQAYEQFE 120
Query: 499 LFTGGLAPEDFMRKLV 514
+FTG AP++ +++
Sbjct: 121 IFTGLPAPKELYWQIM 136
>gi|315230187|ref|YP_004070623.1| shikimate 5-dehydrogenase I alpha [Thermococcus barophilus MP]
gi|315183215|gb|ADT83400.1| shikimate 5-dehydrogenase I alpha [Thermococcus barophilus MP]
Length = 272
Score = 164 bits (416), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 106/285 (37%), Positives = 163/285 (57%), Gaps = 21/285 (7%)
Query: 233 INPDTKIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLVDDVKEFFRTYSGTDFAGF 292
IN T+++GL+ PV HS P++HN F+ N +Y+ VDD++ + +G
Sbjct: 2 INAKTRLYGLIGKPVEHSLSPVIHNALFKRYNINAVYLAFDVDDLESAVKGVKALGISGL 61
Query: 293 SVGIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALRER 352
+V +P+KE + DE+ A++IG+VNT++ R +GKL+GYNTD A+ A++
Sbjct: 62 NVTMPYKEQILEFLDELSEEARAIGSVNTVVNR--EGKLIGYNTDGIGALKALK------ 113
Query: 353 QGINGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGARVIIFNRNYERAKALAD-AVS 411
+ + GK +L+GAGGAG+A+A+ SR A+V++ NR +AK L V
Sbjct: 114 --------RFTEVEGKRVLLLGAGGAGKAIAY-TLSRLAKVVVLNRTERKAKELEKFGVK 164
Query: 412 GEALHFEYLHEFFPEKGMILANASAIGMEPNSDQSPVPKEALKAYELVFDAVYTPRNTRL 471
G L E L + +++ NA+++GM N D+SP+PK L+ +VFD VY+P T L
Sbjct: 165 GGKLSKENLKRYLSWADIVI-NATSLGM--NEDRSPIPKGLLRENLVVFDIVYSPLETNL 221
Query: 472 LREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRKLVLE 516
LREA EVG + G+ M I Q FRL+TG +FMR+ L+
Sbjct: 222 LREAREVGCLTIDGLWMLIHQGAESFRLWTGVKPDVEFMRREALK 266
>gi|228987587|ref|ZP_04147703.1| Shikimate dehydrogenase [Bacillus thuringiensis serovar
tochigiensis BGSC 4Y1]
gi|228772128|gb|EEM20578.1| Shikimate dehydrogenase [Bacillus thuringiensis serovar
tochigiensis BGSC 4Y1]
Length = 277
Score = 164 bits (415), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 101/288 (35%), Positives = 151/288 (52%), Gaps = 22/288 (7%)
Query: 238 KIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLVDD--VKEFFRTYSGTDFAGFSVG 295
+++G++ NP+GHS P++HN AF H + Y LV + + E R +GF+V
Sbjct: 3 QLYGVIGNPIGHSLSPVMHNDAFEHLNMDAHYHAFLVKEEVLGEAVRGLKALGISGFNVT 62
Query: 296 IPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALRERQGI 355
PHK + DE+ PLAK IGAVNT++ + DGKL+GYNTD + A++ E
Sbjct: 63 TPHKVAIMNYLDEIAPLAKQIGAVNTVVHK--DGKLIGYNTDGIGFVRALQSISSE---- 116
Query: 356 NGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGARVI-IFNRNYERAKALADA----V 410
P+ K +L+GAGGA RA+ F G R I + NR ++AK L A V
Sbjct: 117 --------PLQEKRILLLGAGGASRAIYFSLADVGVREIDVANRTVDKAKELIAACTATV 168
Query: 411 SGEALHFEYLHEFFPEKGMILANASAIGMEPNSDQSPVPKEALKAYELVFDAVYTPRNTR 470
AL E E E I+ + IGM P +P+ +LK +V D +Y P T+
Sbjct: 169 HSVALSLEKATEE-QENYDIIIQTTTIGMHPRVQHTPLQISSLKKGTIVSDIIYNPFETK 227
Query: 471 LLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRKLVLEQF 518
+L EA E GA + +G++MF+ Q F ++TG + M++LV+ +
Sbjct: 228 ILCEAKEQGAMIQNGIDMFVYQGALAFEMWTGRTPNIERMKQLVIRKL 275
>gi|30264406|ref|NP_846783.1| shikimate 5-dehydrogenase [Bacillus anthracis str. Ames]
gi|47529857|ref|YP_021206.1| shikimate 5-dehydrogenase [Bacillus anthracis str. 'Ames Ancestor']
gi|65321706|ref|ZP_00394665.1| COG0169: Shikimate 5-dehydrogenase [Bacillus anthracis str. A2012]
gi|170707392|ref|ZP_02897846.1| shikimate 5-dehydrogenase [Bacillus anthracis str. A0389]
gi|229603912|ref|YP_002868624.1| shikimate 5-dehydrogenase [Bacillus anthracis str. A0248]
gi|30259064|gb|AAP28269.1| shikimate dehydrogenase [Bacillus anthracis str. Ames]
gi|47505005|gb|AAT33681.1| shikimate 5-dehydrogenase [Bacillus anthracis str. 'Ames Ancestor']
gi|170127636|gb|EDS96509.1| shikimate 5-dehydrogenase [Bacillus anthracis str. A0389]
gi|229268320|gb|ACQ49957.1| shikimate dehydrogenase [Bacillus anthracis str. A0248]
Length = 308
Score = 164 bits (415), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 100/290 (34%), Positives = 155/290 (53%), Gaps = 26/290 (8%)
Query: 238 KIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLVDD--VKEFFRTYSGTDFAGFSVG 295
+++G++ NP+GHS P++HN AF H + + Y LV + + E R +GF+V
Sbjct: 3 QLYGVIGNPIGHSLSPVMHNDAFEHLKMDAHYHAFLVKEEVLGEAVRGLKALGISGFNVT 62
Query: 296 IPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALRERQGI 355
PHK + DE+ PLAK IGAVNT++ + DGKL+GYNTD + A++ E
Sbjct: 63 TPHKVAIMDYLDEIDPLAKQIGAVNTVVHK--DGKLIGYNTDGIGFVRALQSISSE---- 116
Query: 356 NGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGARVI-IFNRNYERAKALADA----V 410
P+ K +L+GAGGA RA+ F G + I + NR ++AK L A V
Sbjct: 117 --------PLQEKRILLLGAGGASRAIYFSLADAGVKEIDVANRTVDKAKELIAACTATV 168
Query: 411 SGEALHFEYLHEFFPEKGM--ILANASAIGMEPNSDQSPVPKEALKAYELVFDAVYTPRN 468
AL E + E+G I+ + IGM P + +P+ +LK +V D +Y P
Sbjct: 169 HSVALSLE---KATKEQGNYDIIIQTTTIGMHPRVEHTPLQISSLKKGTIVSDIIYNPFE 225
Query: 469 TRLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRKLVLEQF 518
T++L EA E GA + +G++MF+ Q F ++TG + + M++LV+
Sbjct: 226 TKILCEAKEQGAIIQNGIDMFVYQGALAFEMWTGCVPNIERMKQLVIRNL 275
>gi|49481393|ref|YP_038388.1| shikimate 5-dehydrogenase [Bacillus thuringiensis serovar konkukian
str. 97-27]
gi|196039231|ref|ZP_03106537.1| shikimate dehydrogenase [Bacillus cereus NVH0597-99]
gi|81696659|sp|Q6HDI8.1|AROE_BACHK RecName: Full=Shikimate dehydrogenase
gi|49332949|gb|AAT63595.1| shikimate 5-dehydrogenase [Bacillus thuringiensis serovar konkukian
str. 97-27]
gi|196029858|gb|EDX68459.1| shikimate dehydrogenase [Bacillus cereus NVH0597-99]
Length = 277
Score = 164 bits (414), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 100/290 (34%), Positives = 155/290 (53%), Gaps = 26/290 (8%)
Query: 238 KIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLVDD--VKEFFRTYSGTDFAGFSVG 295
+++G++ NP+GHS P++HN AF H + Y LV + + E R +GF+V
Sbjct: 3 QLYGVIGNPIGHSLSPVMHNDAFEHLNMDAHYHAFLVKEEVLGEAVRGLKALGISGFNVT 62
Query: 296 IPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALRERQGI 355
PHK + DE+ PLAK IGAVNT++ + DGKL+GYNTD + A++ E
Sbjct: 63 TPHKVAIMDYLDEIDPLAKQIGAVNTVVHK--DGKLIGYNTDGIGFVRALQSISSE---- 116
Query: 356 NGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGARVI-IFNRNYERAKALADA----V 410
P+ K +L+GAGGA RA+ F G + I + NR ++AK L A V
Sbjct: 117 --------PLQEKRILLLGAGGASRAIYFSLADAGVKEIDVANRTVDKAKELIAACTATV 168
Query: 411 SGEALHFEYLHEFFPEKGM--ILANASAIGMEPNSDQSPVPKEALKAYELVFDAVYTPRN 468
AL E + E+G I+ + IGM P + +P+ +LK +V D +Y P
Sbjct: 169 HSVALSLE---KATKEQGSYDIIIQTTTIGMHPRVEHTPLQISSLKKGTIVSDIIYNPFE 225
Query: 469 TRLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRKLVLEQF 518
T++L EA E GA + +G++MF+ Q F ++TG + + M++LV+ +
Sbjct: 226 TKILCEAKEQGAIIQNGIDMFVYQGALAFEMWTGCVPNIERMKQLVIRKL 275
>gi|52141171|ref|YP_085659.1| shikimate 5-dehydrogenase [Bacillus cereus E33L]
gi|81686158|sp|Q634K8.1|AROE_BACCZ RecName: Full=Shikimate dehydrogenase
gi|51974640|gb|AAU16190.1| shikimate 5-dehydrogenase [Bacillus cereus E33L]
Length = 277
Score = 164 bits (414), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 100/290 (34%), Positives = 155/290 (53%), Gaps = 26/290 (8%)
Query: 238 KIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLVDD--VKEFFRTYSGTDFAGFSVG 295
+++G++ NP+GHS P++HN AF H + Y LV + + E R +GF+V
Sbjct: 3 QLYGVIGNPIGHSLSPVMHNDAFEHLNMDAHYHAFLVKEEVLGEAVRGLKALGISGFNVT 62
Query: 296 IPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALRERQGI 355
PHK + DE+ PLAK IGAVNT++ + DGKL+GYNTD + A++ E
Sbjct: 63 TPHKVAIMDYLDEIDPLAKQIGAVNTVVHK--DGKLIGYNTDGIGFVRALQSISNE---- 116
Query: 356 NGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGARVI-IFNRNYERAKALADA----V 410
P+ K +L+GAGGA RA+ F G + I + NR ++AK L A V
Sbjct: 117 --------PLQEKRILLLGAGGASRAIYFSLADVGVKEIDVANRTVDKAKELIAACTATV 168
Query: 411 SGEALHFEYLHEFFPEKGM--ILANASAIGMEPNSDQSPVPKEALKAYELVFDAVYTPRN 468
AL E + E+G I+ + IGM P + +P+ +LK +V D +Y P
Sbjct: 169 HSVALSLE---KATKEQGNYDIIIQTTTIGMHPRVEHTPLQISSLKKGTIVSDIIYNPFE 225
Query: 469 TRLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRKLVLEQF 518
T++L EA E GA + +G++MF+ Q F ++TG + + M++LV+ +
Sbjct: 226 TKILCEAKEQGAIIQNGIDMFVYQGALAFEMWTGCVPNIERMKQLVIRKL 275
>gi|47569330|ref|ZP_00240014.1| shikimate 5-dehydrogenase [Bacillus cereus G9241]
gi|47554001|gb|EAL12368.1| shikimate 5-dehydrogenase [Bacillus cereus G9241]
Length = 277
Score = 164 bits (414), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 101/288 (35%), Positives = 151/288 (52%), Gaps = 22/288 (7%)
Query: 238 KIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLVDD--VKEFFRTYSGTDFAGFSVG 295
+++G++ NP+GHS P++HN AF H + Y LV + + E R +GF+V
Sbjct: 3 QLYGVIGNPIGHSLSPVMHNDAFEHLNMDAHYHAFLVKEEVLGEAVRGLKALGISGFNVT 62
Query: 296 IPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALRERQGI 355
PHK + DE+ PLAK IGAVNT++ + DGKL+GYNTD + A++ E
Sbjct: 63 TPHKVAIMNYLDEIDPLAKQIGAVNTVVHK--DGKLIGYNTDGIGFVRALQSISSE---- 116
Query: 356 NGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGARVI-IFNRNYERAKALADA----V 410
P+ K +L+GAGGA RA+ F G R I + NR ++AK L A V
Sbjct: 117 --------PLQEKRILLLGAGGASRAIYFSLADVGVREIDVANRTVDKAKELIAACTATV 168
Query: 411 SGEALHFEYLHEFFPEKGMILANASAIGMEPNSDQSPVPKEALKAYELVFDAVYTPRNTR 470
AL E E E I+ + IGM P +P+ +LK +V D +Y P T+
Sbjct: 169 HSVALSLEKATEE-QENYDIIIQTTTIGMHPRVQYTPLQISSLKKGTIVSDIIYNPFETK 227
Query: 471 LLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRKLVLEQF 518
+L EA E GA + +G++MF+ Q F ++TG + M++LV+ +
Sbjct: 228 ILCEAKEQGAMIQNGIDMFVYQGALAFEMWTGRTPNIERMKQLVIRKL 275
>gi|218905471|ref|YP_002453305.1| shikimate 5-dehydrogenase [Bacillus cereus AH820]
gi|228929379|ref|ZP_04092402.1| Shikimate dehydrogenase [Bacillus thuringiensis serovar
pondicheriensis BGSC 4BA1]
gi|229123873|ref|ZP_04253066.1| Shikimate dehydrogenase [Bacillus cereus 95/8201]
gi|226724114|sp|B7JNW6.1|AROE_BACC0 RecName: Full=Shikimate dehydrogenase
gi|218536842|gb|ACK89240.1| shikimate 5-dehydrogenase [Bacillus cereus AH820]
gi|228659587|gb|EEL15234.1| Shikimate dehydrogenase [Bacillus cereus 95/8201]
gi|228830285|gb|EEM75899.1| Shikimate dehydrogenase [Bacillus thuringiensis serovar
pondicheriensis BGSC 4BA1]
Length = 277
Score = 164 bits (414), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 100/290 (34%), Positives = 155/290 (53%), Gaps = 26/290 (8%)
Query: 238 KIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLVDD--VKEFFRTYSGTDFAGFSVG 295
+++G++ NP+GHS P++HN AF H + Y LV + + E R +GF+V
Sbjct: 3 QLYGVIGNPIGHSLSPVMHNDAFEHLNMDAHYHAFLVKEEVLGEAVRGLKALGISGFNVT 62
Query: 296 IPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALRERQGI 355
PHK + DE+ PLAK IGAVNT++ + DGKL+GYNTD + A++ E
Sbjct: 63 TPHKVAIMDYLDEIDPLAKQIGAVNTVVHK--DGKLIGYNTDGIGFVRALQSISSE---- 116
Query: 356 NGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGARVI-IFNRNYERAKALADA----V 410
P+ K +L+GAGGA RA+ F G + I + NR ++AK L A V
Sbjct: 117 --------PLQEKRILLLGAGGASRAIYFSLADAGVKEIDVANRTVDKAKELIAACTATV 168
Query: 411 SGEALHFEYLHEFFPEKGM--ILANASAIGMEPNSDQSPVPKEALKAYELVFDAVYTPRN 468
AL E + E+G I+ + IGM P + +P+ +LK +V D +Y P
Sbjct: 169 HSVALSLE---KATKEQGNYDIIIQTTTIGMHPRVEHTPLQISSLKKGTIVSDIIYNPFE 225
Query: 469 TRLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRKLVLEQF 518
T++L EA E GA + +G++MF+ Q F ++TG + + M++LV+ +
Sbjct: 226 TKILCEAKEQGAIIQNGIDMFVYQGALAFEMWTGCVPNIERMKQLVIRKL 275
>gi|229117832|ref|ZP_04247196.1| Shikimate dehydrogenase [Bacillus cereus Rock1-3]
gi|423377808|ref|ZP_17355092.1| shikimate dehydrogenase [Bacillus cereus BAG1O-2]
gi|423547637|ref|ZP_17523995.1| shikimate dehydrogenase [Bacillus cereus HuB5-5]
gi|423622578|ref|ZP_17598356.1| shikimate dehydrogenase [Bacillus cereus VD148]
gi|228665629|gb|EEL21107.1| Shikimate dehydrogenase [Bacillus cereus Rock1-3]
gi|401179358|gb|EJQ86531.1| shikimate dehydrogenase [Bacillus cereus HuB5-5]
gi|401260698|gb|EJR66866.1| shikimate dehydrogenase [Bacillus cereus VD148]
gi|401636074|gb|EJS53828.1| shikimate dehydrogenase [Bacillus cereus BAG1O-2]
Length = 276
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 99/289 (34%), Positives = 157/289 (54%), Gaps = 25/289 (8%)
Query: 238 KIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLVDD-VKEFFRTYSGTDFAGFSVGI 296
+++G++ NP+GHS P++HN AF H + Y LV++ + E R +GF+V
Sbjct: 3 QLYGVIGNPIGHSLSPVMHNDAFEHLNMDAHYHAFLVEEGLGEAVRGLKALGISGFNVTT 62
Query: 297 PHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALRERQGIN 356
PHK + DE+ PLA+ IGAVNT++ + DGKL+GYNTD + A++ E
Sbjct: 63 PHKVAIMDYLDEIDPLARQIGAVNTVVHK--DGKLIGYNTDGIGFVRALQSISSE----- 115
Query: 357 GVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGARVI-IFNRNYERAKALADAVSGE-- 413
P+ K +L+GAGGA RA+ F G + I + NR ++AK L A + +
Sbjct: 116 -------PLQEKRILLLGAGGASRAIYFSLADVGVKEIDVANRTVDKAKELIAACAADVH 168
Query: 414 --ALHFEYLHEFFPEKGM--ILANASAIGMEPNSDQSPVPKEALKAYELVFDAVYTPRNT 469
AL E E E+G I+ + GM P+ + +P+ +LK +V D +Y P T
Sbjct: 169 SVALSLEKATE---EQGNYDIIIQTTTRGMHPHVEHTPLQICSLKEATIVSDIIYNPFET 225
Query: 470 RLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRKLVLEQF 518
++L EA E GA + +G++MF+ Q F ++TG + D M++LV+ +
Sbjct: 226 KILCEAKEQGAIIQNGIDMFVYQGALAFEMWTGRVPNIDRMKQLVMRKL 274
>gi|228916966|ref|ZP_04080527.1| Shikimate dehydrogenase [Bacillus thuringiensis serovar pulsiensis
BGSC 4CC1]
gi|228842687|gb|EEM87774.1| Shikimate dehydrogenase [Bacillus thuringiensis serovar pulsiensis
BGSC 4CC1]
Length = 277
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 100/290 (34%), Positives = 155/290 (53%), Gaps = 26/290 (8%)
Query: 238 KIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLVDD--VKEFFRTYSGTDFAGFSVG 295
+++G++ NP+GHS P++HN AF H + Y LV + + E R +GF+V
Sbjct: 3 QLYGVIGNPIGHSLSPVMHNDAFEHLNMDAHYHAFLVKEEVLGEAVRGLKALGISGFNVT 62
Query: 296 IPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALRERQGI 355
PHK + DE+ PLAK IGAVNT++ + DGKL+GYNTD + A++ E
Sbjct: 63 TPHKVAIMDYLDEIDPLAKQIGAVNTVVHK--DGKLIGYNTDGIGFVRALQSISSE---- 116
Query: 356 NGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGARVI-IFNRNYERAKALADA----V 410
P+ K +L+GAGGA RA+ F G + I + NR ++AK L A V
Sbjct: 117 --------PLQEKRILLLGAGGASRAIYFSLADAGVKEIDVANRTVDKAKELIAACTATV 168
Query: 411 SGEALHFEYLHEFFPEKGM--ILANASAIGMEPNSDQSPVPKEALKAYELVFDAVYTPRN 468
AL E + E+G I+ + IGM P + +P+ +LK +V D +Y P
Sbjct: 169 HSVALSLE---KATKEQGNYDIIIQTTTIGMHPRVEHTPLQISSLKNGTIVSDIIYNPFE 225
Query: 469 TRLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRKLVLEQF 518
T++L EA E GA + +G++MF+ Q F ++TG + + M++LV+ +
Sbjct: 226 TKILCEAKEQGAIIQNGIDMFVYQGALAFEMWTGCVPNIERMKQLVIRKL 275
>gi|381179077|ref|ZP_09887939.1| Shikimate dehydrogenase substrate binding domain protein [Treponema
saccharophilum DSM 2985]
gi|380769025|gb|EIC03002.1| Shikimate dehydrogenase substrate binding domain protein [Treponema
saccharophilum DSM 2985]
Length = 502
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 145/514 (28%), Positives = 239/514 (46%), Gaps = 49/514 (9%)
Query: 10 LVCTQLECETTEEMQASIEQAKVEGADLVEL---CIDSMEFSHISEVDKLIQHPTLPAIV 66
LVC L +T +E I + + D+VEL C++ E +I + L++ P L I
Sbjct: 5 LVCLCLTGKTIDE-DVRIAEEYIRYIDMVELRADCLEEDERLNIRDFPSLVKVPCLLTI- 62
Query: 67 SYRLKSSRKSSDEACKNTCLQVLRRAL-----DLDVEFVEMDYEVASDPLMSEIIYSRS- 120
R+ K + + L RAL D F +D+E D + + +
Sbjct: 63 -RRVADGGKYEEGEASRSML--FARALAFADEDKRKNFAYVDFE---DDFIVPGLQDAAL 116
Query: 121 --NTKIIVSSY-LNGGGKPTTEKLGDVIACMQATGADVMKLEIAVDSITDLAPVF-EMLT 176
T+II S + +N K ++L M+ TG ++ K+ S++D+ +F E
Sbjct: 117 AFGTRIIRSFHDMNNPVKNIAQRLSK----MRMTGFEIPKIAFMPKSLSDITDLFKEASA 172
Query: 177 HCQVPLIALAVGSRGLISQLLGPKFGGFLVYGSLGG--KSVPGLPTL--VSLKQVYQLEH 232
I A+ + GL +++L +F +L + S ++V GL + VSL +Y+
Sbjct: 173 LSGTEQIICAMSAFGLPTRVLAQRFNSYLSFTSPAELMENVKGLGHVDPVSLSSLYRFRS 232
Query: 233 INPDTKIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLVDDVKEFFRTYSGTDFAGF 292
I+ +T++FG+ P+ + P +HN F N +YVP + +E F + GF
Sbjct: 233 IDSETRLFGITGFPLVATSSPKIHNTIFGENEMNAVYVPFKAEKAEEAFEFANTMGVCGF 292
Query: 293 SVGIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALRER 352
SV +PHKE + D V + +GA NT++R DGK +G+NTDC E A++E
Sbjct: 293 SVTVPHKETIIPLLDSVDKGVQEMGACNTVVRE--DGKWLGFNTDC----IGFELAIKEF 346
Query: 353 QGINGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGARVIIFNRNYERAKALADAV-- 410
G + ++G ++GAGGA +A+ + K+ GA IFNR +A+ LA+ V
Sbjct: 347 TGRDS-------LSGMKVSVIGAGGAAKAIVYALKNLGADACIFNRTSVKARKLAEKVGF 399
Query: 411 SGEALHFEYLHEFFPEKGMILANASAIGM----EPNSDQSPVPKEALKAYELVFDAVYTP 466
+ L + + + +I+ S GM EPN P+ EL++D VY P
Sbjct: 400 NYSGLGSDCIMKLQSYSDLIVQTTSK-GMNSTDEPNETNDPIWFYDFTGNELLYDIVYEP 458
Query: 467 RNTRLLREAAEVGATVVSGVEMFIRQALGQFRLF 500
T +++ AA G V +G+ M Q Q R+F
Sbjct: 459 NVTPVMKRAAAAGCRVANGLSMLRYQGEEQARIF 492
>gi|423612545|ref|ZP_17588406.1| shikimate dehydrogenase [Bacillus cereus VD107]
gi|401246134|gb|EJR52486.1| shikimate dehydrogenase [Bacillus cereus VD107]
Length = 277
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 98/288 (34%), Positives = 156/288 (54%), Gaps = 22/288 (7%)
Query: 238 KIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLVDD--VKEFFRTYSGTDFAGFSVG 295
+++G++ NP+GHS P++HN AF H + Y LV++ + E + +GF+V
Sbjct: 3 QLYGVIGNPIGHSLSPVMHNDAFEHLNMDAHYHAFLVEEEALGEAVKGLKALGISGFNVT 62
Query: 296 IPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALRERQGI 355
PHK + DEV PLA+ IGAVNT++ R DGKL+GYNTD + A++ +
Sbjct: 63 TPHKVAIMEYLDEVAPLAEQIGAVNTVVHR--DGKLIGYNTDGIGFVRALQSISED---- 116
Query: 356 NGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGARVI-IFNRNYERAKALADA----V 410
P+ K +L+GAGGA RA+ F G + I I NR ++A+ L V
Sbjct: 117 --------PLQEKRILLIGAGGASRAIYFSLADVGVKEIDIANRTVDKAENLIAGCMANV 168
Query: 411 SGEALHFEYLHEFFPEKGMILANASAIGMEPNSDQSPVPKEALKAYELVFDAVYTPRNTR 470
+ AL E E E +I+ + IGM P+ + +P+ +LK +V D +Y P T+
Sbjct: 169 NSHALSLECAAENQGEYDIII-QTTTIGMHPHVEYTPLEIRSLKQGTIVSDIIYNPFETK 227
Query: 471 LLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRKLVLEQF 518
+L +A E GA + +G++MF+ Q F ++TG + D M++LV+ +
Sbjct: 228 ILGDAKEQGAIIQNGIDMFVYQGALAFEMWTGCVPNIDRMKQLVMRKL 275
>gi|228935655|ref|ZP_04098469.1| Shikimate dehydrogenase [Bacillus thuringiensis serovar
andalousiensis BGSC 4AW1]
gi|228824015|gb|EEM69833.1| Shikimate dehydrogenase [Bacillus thuringiensis serovar
andalousiensis BGSC 4AW1]
Length = 277
Score = 163 bits (412), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 100/290 (34%), Positives = 155/290 (53%), Gaps = 26/290 (8%)
Query: 238 KIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLVDD--VKEFFRTYSGTDFAGFSVG 295
+++G++ NP+GHS P++HN AF H + Y LV + + E R +GF+V
Sbjct: 3 QLYGVIGNPIGHSLSPVMHNDAFEHLNMDAHYHAFLVKEEVLGEAVRGLKALGISGFNVT 62
Query: 296 IPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALRERQGI 355
PHK + DE+ PLAK IGAVNT++ + DGKL+GYNTD + A++ E
Sbjct: 63 TPHKVAIMDYLDEIDPLAKQIGAVNTVVHK--DGKLIGYNTDGIGFVRALQSISSE---- 116
Query: 356 NGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGARVI-IFNRNYERAKALADA----V 410
P+ K +L+GAGGA RA+ F G + I + NR ++AK L A V
Sbjct: 117 --------PLQEKRILLLGAGGASRAIYFSLADAGVKEIDVANRTVDKAKELIAACTATV 168
Query: 411 SGEALHFEYLHEFFPEKGM--ILANASAIGMEPNSDQSPVPKEALKAYELVFDAVYTPRN 468
AL E + E+G I+ + IGM P + +P+ +LK +V D +Y P
Sbjct: 169 HSVALSLE---KATKEQGNYDIIIQTTTIGMHPCVEHTPLQISSLKKGTIVSDIIYNPFE 225
Query: 469 TRLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRKLVLEQF 518
T++L EA E GA + +G++MF+ Q F ++TG + + M++LV+ +
Sbjct: 226 TKILCEAKEQGAIIQNGIDMFVYQGALAFEMWTGCVPNIERMKQLVIRKL 275
>gi|301055826|ref|YP_003794037.1| shikimate 5-dehydrogenase [Bacillus cereus biovar anthracis str.
CI]
gi|423549924|ref|ZP_17526251.1| shikimate dehydrogenase [Bacillus cereus ISP3191]
gi|300377995|gb|ADK06899.1| shikimate 5-dehydrogenase [Bacillus cereus biovar anthracis str.
CI]
gi|401189540|gb|EJQ96590.1| shikimate dehydrogenase [Bacillus cereus ISP3191]
Length = 277
Score = 163 bits (412), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 100/290 (34%), Positives = 155/290 (53%), Gaps = 26/290 (8%)
Query: 238 KIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLVDD--VKEFFRTYSGTDFAGFSVG 295
+++G++ NP+GHS P++HN AF H + Y LV + + E R +GF+V
Sbjct: 3 QLYGVIGNPIGHSLSPVMHNDAFEHLNMDAHYHAFLVKEEVLGEAVRGLKALGISGFNVT 62
Query: 296 IPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALRERQGI 355
PHK + DE+ PLAK IGAVNT++ + DGKL+GYNTD + A++ E
Sbjct: 63 TPHKVAIMDYLDEIDPLAKQIGAVNTVVHK--DGKLIGYNTDGIGFVRALQSISSE---- 116
Query: 356 NGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGARVI-IFNRNYERAKALADA----V 410
P+ K +L+GAGGA RA+ F G + I + NR ++AK L A V
Sbjct: 117 --------PLREKRILLLGAGGASRAIYFSLVDAGVKEIAVANRTVDKAKELIAACTATV 168
Query: 411 SGEALHFEYLHEFFPEKGM--ILANASAIGMEPNSDQSPVPKEALKAYELVFDAVYTPRN 468
AL E + E+G I+ + IGM P + +P+ +LK +V D +Y P
Sbjct: 169 HSVALSLE---KATKEQGNYDIIIQTTTIGMHPRVEHTPLQISSLKKGTIVSDIIYNPFE 225
Query: 469 TRLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRKLVLEQF 518
T++L EA E GA + +G++MF+ Q F ++TG + + M++LV+ +
Sbjct: 226 TKILCEAKEQGAIIQNGIDMFVYQGALAFEMWTGCVPNIERMKQLVIRKL 275
>gi|229076009|ref|ZP_04208982.1| Shikimate dehydrogenase [Bacillus cereus Rock4-18]
gi|229098806|ref|ZP_04229744.1| Shikimate dehydrogenase [Bacillus cereus Rock3-29]
gi|229104966|ref|ZP_04235622.1| Shikimate dehydrogenase [Bacillus cereus Rock3-28]
gi|407706862|ref|YP_006830447.1| stage IV sporulation protein FB [Bacillus thuringiensis MC28]
gi|423440916|ref|ZP_17417822.1| shikimate dehydrogenase [Bacillus cereus BAG4X2-1]
gi|423448916|ref|ZP_17425795.1| shikimate dehydrogenase [Bacillus cereus BAG5O-1]
gi|423533344|ref|ZP_17509762.1| shikimate dehydrogenase [Bacillus cereus HuB2-9]
gi|423541401|ref|ZP_17517792.1| shikimate dehydrogenase [Bacillus cereus HuB4-10]
gi|423615324|ref|ZP_17591158.1| shikimate dehydrogenase [Bacillus cereus VD115]
gi|228678460|gb|EEL32681.1| Shikimate dehydrogenase [Bacillus cereus Rock3-28]
gi|228684650|gb|EEL38590.1| Shikimate dehydrogenase [Bacillus cereus Rock3-29]
gi|228707121|gb|EEL59321.1| Shikimate dehydrogenase [Bacillus cereus Rock4-18]
gi|401129510|gb|EJQ37193.1| shikimate dehydrogenase [Bacillus cereus BAG5O-1]
gi|401172589|gb|EJQ79810.1| shikimate dehydrogenase [Bacillus cereus HuB4-10]
gi|401261003|gb|EJR67170.1| shikimate dehydrogenase [Bacillus cereus VD115]
gi|402417577|gb|EJV49877.1| shikimate dehydrogenase [Bacillus cereus BAG4X2-1]
gi|402463563|gb|EJV95263.1| shikimate dehydrogenase [Bacillus cereus HuB2-9]
Length = 276
Score = 163 bits (412), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 99/289 (34%), Positives = 157/289 (54%), Gaps = 25/289 (8%)
Query: 238 KIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLVDD-VKEFFRTYSGTDFAGFSVGI 296
+++G++ NP+GHS P++HN AF H + Y LV++ + E R +GF+V
Sbjct: 3 QLYGVIGNPIGHSLSPVMHNDAFEHLNMDAHYHAFLVEEGLGEAVRGLKALGISGFNVTT 62
Query: 297 PHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALRERQGIN 356
PHK + DE+ PLA+ IGAVNT++ + DGKL+GYNTD + A++ E
Sbjct: 63 PHKVAIMDYLDEIDPLARQIGAVNTVVHK--DGKLIGYNTDGIGFVRALQSISSE----- 115
Query: 357 GVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGARVI-IFNRNYERAKALADAVSGE-- 413
P+ K +L+GAGGA RA+ F G + I + NR ++AK L A + +
Sbjct: 116 -------PLQEKRILLLGAGGASRAIYFSLADVGVKEIDVANRTVDKAKELIAACAADVH 168
Query: 414 --ALHFEYLHEFFPEKGM--ILANASAIGMEPNSDQSPVPKEALKAYELVFDAVYTPRNT 469
AL E E E+G I+ + GM P+ + +P+ +LK +V D +Y P T
Sbjct: 169 SVALSLEKATE---EQGNYDIIIQTTTRGMHPHVEHTPLQICSLKEGTIVSDIIYNPFET 225
Query: 470 RLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRKLVLEQF 518
++L EA E GA + +G++MF+ Q F ++TG + D M++LV+ +
Sbjct: 226 KILCEAKEQGAIIQNGIDMFVYQGALAFEMWTGRVPNIDRMKQLVMRKL 274
>gi|423558082|ref|ZP_17534384.1| shikimate dehydrogenase [Bacillus cereus MC67]
gi|401191350|gb|EJQ98372.1| shikimate dehydrogenase [Bacillus cereus MC67]
Length = 277
Score = 162 bits (411), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 98/288 (34%), Positives = 155/288 (53%), Gaps = 22/288 (7%)
Query: 238 KIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLVDD--VKEFFRTYSGTDFAGFSVG 295
+++G++ NP+GHS P++HN AF H + Y LV++ + E + +GF+V
Sbjct: 3 QLYGVIGNPIGHSLSPVMHNDAFEHLNMDAHYHAFLVEEEALGEAVKGLKALGISGFNVT 62
Query: 296 IPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALRERQGI 355
PHK + DEV PLA+ IGAVNT++ R DGKL+GYNTD + A++ +
Sbjct: 63 TPHKVAVMEYLDEVAPLARQIGAVNTVVHR--DGKLIGYNTDGIGFVRALQSISED---- 116
Query: 356 NGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGARVI-IFNRNYERAKALADA----V 410
P+ K +L+GAGGA RA+ F G + I I NR ++A+ L V
Sbjct: 117 --------PLQEKRILLIGAGGASRAIYFSLADVGVKEIDIANRTRDKAENLIAGCMANV 168
Query: 411 SGEALHFEYLHEFFPEKGMILANASAIGMEPNSDQSPVPKEALKAYELVFDAVYTPRNTR 470
+ AL E E E +I+ + IGM P+ +P+ +LK +V D +Y P T+
Sbjct: 169 NSHALSLECAAENQGEYDIII-QTTTIGMHPHVAYTPLEIRSLKQGTIVSDIIYNPFETK 227
Query: 471 LLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRKLVLEQF 518
+L +A E GA + +G++MF+ Q F ++TG + D M++LV+ +
Sbjct: 228 ILGDAKEQGAIIQNGIDMFVYQGALAFEMWTGCVPNIDRMKQLVMREL 275
>gi|229093404|ref|ZP_04224509.1| Shikimate dehydrogenase [Bacillus cereus Rock3-42]
gi|228689998|gb|EEL43801.1| Shikimate dehydrogenase [Bacillus cereus Rock3-42]
Length = 277
Score = 162 bits (411), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 100/290 (34%), Positives = 154/290 (53%), Gaps = 26/290 (8%)
Query: 238 KIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLVDD--VKEFFRTYSGTDFAGFSVG 295
+++G++ NP+GHS P++HN AF H Y LV + + E R +GF+V
Sbjct: 3 QLYGVIGNPIGHSLSPVMHNDAFEHLNMGAHYHAFLVKEEVLGEAVRGLKALGISGFNVT 62
Query: 296 IPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALRERQGI 355
PHK + DE+ PLAK IGAVNT++ + DGKL+GYNTD + A++ E
Sbjct: 63 TPHKVAIMDYLDEIDPLAKQIGAVNTVVHK--DGKLIGYNTDGIGFVRALQSISSE---- 116
Query: 356 NGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGARVI-IFNRNYERAKALADA----V 410
P+ K +L+GAGGA RA+ F G + I + NR ++AK L A V
Sbjct: 117 --------PLQEKRILLLGAGGASRAIYFSLADAGVKEIDVANRTVDKAKELIAACTATV 168
Query: 411 SGEALHFEYLHEFFPEKGM--ILANASAIGMEPNSDQSPVPKEALKAYELVFDAVYTPRN 468
AL E + E+G I+ + IGM P + +P+ +LK +V D +Y P
Sbjct: 169 HSVALSLE---KATKEQGNYDIIIQTTTIGMHPRVEHTPLQISSLKNGTIVSDIIYNPFE 225
Query: 469 TRLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRKLVLEQF 518
T++L EA E GA + +G++MF+ Q F ++TG + + M++LV+ +
Sbjct: 226 TKILCEAKEQGAIIQNGIDMFVYQGALAFEMWTGCVPNIERMKQLVIRKL 275
>gi|402555531|ref|YP_006596802.1| shikimate 5-dehydrogenase [Bacillus cereus FRI-35]
gi|401796741|gb|AFQ10600.1| shikimate 5-dehydrogenase [Bacillus cereus FRI-35]
Length = 277
Score = 162 bits (411), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 100/290 (34%), Positives = 153/290 (52%), Gaps = 26/290 (8%)
Query: 238 KIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLVDD--VKEFFRTYSGTDFAGFSVG 295
+++G++ NP+GHS P++HN AF H + Y LV + + E R +GF+V
Sbjct: 3 QLYGVIGNPIGHSLSPVMHNDAFEHLNMDAHYHAFLVKEEVLGEAVRGLKALGISGFNVT 62
Query: 296 IPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALRERQGI 355
PHK + DE+ PLAK IGAVNT++ + DGKL+GYNTD + A++ E
Sbjct: 63 TPHKVAIMDYLDEIDPLAKQIGAVNTVVHK--DGKLIGYNTDGIGFVRALQSISSE---- 116
Query: 356 NGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGARVI-IFNRNYERAKALADA----V 410
P+ K +L+GAGGA RA+ F G + I + NR ++AK L A V
Sbjct: 117 --------PLQEKRILLLGAGGASRAIYFSLADVGVKEIDVANRTVDKAKELITACKATV 168
Query: 411 SGEALHFEYLHEFFPEKGM--ILANASAIGMEPNSDQSPVPKEALKAYELVFDAVYTPRN 468
AL E E E+G I+ + IGM P + +P+ +L +V D +Y P
Sbjct: 169 HSVALSLEKATE---EQGNYDIIIQTTTIGMHPRVEHTPLQISSLNKGTIVSDIIYNPFE 225
Query: 469 TRLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRKLVLEQF 518
T++L EA E GA + +G++MF+ Q F ++TG + M++LV+ +
Sbjct: 226 TKILCEAKEQGAMIQNGIDMFVYQGALAFEMWTGRTPNIERMKQLVIRKL 275
>gi|423483917|ref|ZP_17460607.1| shikimate dehydrogenase [Bacillus cereus BAG6X1-2]
gi|401141468|gb|EJQ49023.1| shikimate dehydrogenase [Bacillus cereus BAG6X1-2]
Length = 277
Score = 162 bits (411), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 97/288 (33%), Positives = 156/288 (54%), Gaps = 22/288 (7%)
Query: 238 KIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLVDD--VKEFFRTYSGTDFAGFSVG 295
+++G++ NP+GHS P++HN AF H + Y LV++ + E + +GF+V
Sbjct: 3 QLYGVIGNPIGHSLSPVMHNDAFEHLNMDAHYHAFLVEEEALGEAVKGLKALGISGFNVT 62
Query: 296 IPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALRERQGI 355
PHK + DEV PLA+ IGAVNT++ R DGKL+GYNTD + A++ +
Sbjct: 63 TPHKVAIMEYLDEVDPLARQIGAVNTVVHR--DGKLIGYNTDGIGFVRALQSISED---- 116
Query: 356 NGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGARVI-IFNRNYERAKALADA----V 410
P+ K +L+GAGGA RA+ F G + I I NR ++A+ L V
Sbjct: 117 --------PLQEKRILLIGAGGASRAIYFSLVDVGVKEIDIANRTRDKAENLIAGCMANV 168
Query: 411 SGEALHFEYLHEFFPEKGMILANASAIGMEPNSDQSPVPKEALKAYELVFDAVYTPRNTR 470
+ AL E E E +I+ + IGM P+ + +P+ +LK +V D +Y P T+
Sbjct: 169 NSHALSLECAAENQGEYDIII-QTTTIGMHPHVEYTPLEIRSLKQGTIVSDIIYNPFETK 227
Query: 471 LLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRKLVLEQF 518
+L +A E GA + +G++MF+ Q F ++TG + D M+++V+ +
Sbjct: 228 ILGDAKEQGAIIQNGIDMFVYQGALAFEMWTGCVPNIDRMKQVVMREL 275
>gi|320352426|ref|YP_004193765.1| shikimate dehydrogenase [Desulfobulbus propionicus DSM 2032]
gi|320120928|gb|ADW16474.1| shikimate dehydrogenase [Desulfobulbus propionicus DSM 2032]
Length = 278
Score = 162 bits (410), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 107/289 (37%), Positives = 155/289 (53%), Gaps = 20/289 (6%)
Query: 233 INPDTKIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLVDDVKEFFRTYSGTDFAGF 292
IN T++FG++ NPV HS P +HN AF H NG+Y+PM D+ + FR F G
Sbjct: 2 INGQTQLFGIIGNPVEHSLSPAMHNAAFAHLGLNGVYIPMRPADLGDGFRGLKSLGFVGV 61
Query: 293 SVGIPHKEPAVACCDEVHPLAKSIGAVNTII-RRPIDG--KLVGYNTDCESAISAIEDAL 349
SV +P K + DEV P+A+ IGAVNT++ RR DG + +GYNTD + A+ +AL
Sbjct: 62 SVTVPFKVAVMDYIDEVDPVARKIGAVNTLLFRRDQDGQNRCLGYNTDWLGSNQALAEAL 121
Query: 350 RERQGINGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGARVIIFNRNYERAKALADA 409
+A +++GAGGA RA+ FG GARV++ NR + + LA
Sbjct: 122 --------------DLATSTVLIIGAGGAARAVGFGLIEAGARVLVTNRTESKGRDLARQ 167
Query: 410 VSGEALHFEYLHEFFPEKGMILANASAIGMEPNSDQSPVPKEALKAYELVFDAVYTPRNT 469
++ F HE + L N +++GM P + P+ L + +V D VY P +T
Sbjct: 168 LN---CPFLSAHELPTAQADALINTTSVGMAPKKEAVPIDPALLARFPVVMDIVYAPLST 224
Query: 470 RLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRKLVLEQF 518
RLL EA + G + G++M Q QF L+TG AP MR+ +LE+
Sbjct: 225 RLLVEAKQRGCRTIDGLKMLQYQGAAQFILWTGREAPHAVMRQALLEEL 273
>gi|423452362|ref|ZP_17429215.1| shikimate dehydrogenase [Bacillus cereus BAG5X1-1]
gi|423470556|ref|ZP_17447300.1| shikimate dehydrogenase [Bacillus cereus BAG6O-2]
gi|423521807|ref|ZP_17498280.1| shikimate dehydrogenase [Bacillus cereus HuA4-10]
gi|401140000|gb|EJQ47557.1| shikimate dehydrogenase [Bacillus cereus BAG5X1-1]
gi|401176469|gb|EJQ83664.1| shikimate dehydrogenase [Bacillus cereus HuA4-10]
gi|402436222|gb|EJV68254.1| shikimate dehydrogenase [Bacillus cereus BAG6O-2]
Length = 277
Score = 162 bits (410), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 98/288 (34%), Positives = 155/288 (53%), Gaps = 22/288 (7%)
Query: 238 KIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLVDD--VKEFFRTYSGTDFAGFSVG 295
+++G++ NP+GHS P++HN AF H + Y LV++ + E + +GF+V
Sbjct: 3 QLYGVIGNPIGHSLSPVMHNDAFEHLNMDAHYHAFLVEEEALGEAVKGLKALGISGFNVT 62
Query: 296 IPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALRERQGI 355
PHK + DEV PLA+ IGAVNT++ R DGKL+GYNTD + A++ +
Sbjct: 63 TPHKVAIMEYLDEVAPLARQIGAVNTVVHR--DGKLIGYNTDGIGFVRALQSISED---- 116
Query: 356 NGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGARVI-IFNRNYERAKALADA----V 410
P+ K +L+GAGGA RA+ F G + I I NR ++A+ L V
Sbjct: 117 --------PLQEKRILLIGAGGASRAIYFSLADVGVKEIDIANRTRDKAENLIAGCMANV 168
Query: 411 SGEALHFEYLHEFFPEKGMILANASAIGMEPNSDQSPVPKEALKAYELVFDAVYTPRNTR 470
+ AL E E E +I+ + IGM P+ +P+ +LK +V D +Y P T+
Sbjct: 169 NSHALSLECAAENQGEYDIII-QTTTIGMHPHVAYTPLEIRSLKQGTIVSDIIYNPFETK 227
Query: 471 LLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRKLVLEQF 518
+L +A E GA + +G++MF+ Q F ++TG + D M++LV+ +
Sbjct: 228 ILGDAKEQGAIIQNGIDMFVYQGALAFEMWTGCVPNIDRMKQLVMREL 275
>gi|423463981|ref|ZP_17440749.1| shikimate dehydrogenase [Bacillus cereus BAG6O-1]
gi|402420248|gb|EJV52519.1| shikimate dehydrogenase [Bacillus cereus BAG6O-1]
Length = 276
Score = 162 bits (410), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 99/289 (34%), Positives = 157/289 (54%), Gaps = 25/289 (8%)
Query: 238 KIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLVDD-VKEFFRTYSGTDFAGFSVGI 296
+++G++ NP+GHS P++HN AF H + Y LV++ + E R +GF+V
Sbjct: 3 QLYGVIGNPIGHSLSPVMHNDAFEHLNMDAHYHAFLVEEGLGEAVRGLKTLGISGFNVTT 62
Query: 297 PHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALRERQGIN 356
PHK + DE+ PLA+ IGAVNT++ + DGKL+GYNTD + A++ E
Sbjct: 63 PHKVAIMDYLDEIDPLARQIGAVNTVVHK--DGKLIGYNTDGIGFVRALQSISSE----- 115
Query: 357 GVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGARVI-IFNRNYERAKALADAVSGE-- 413
P+ K +L+GAGGA RA+ F G + I + NR ++AK L A + +
Sbjct: 116 -------PLQEKRILLLGAGGASRAIYFSLADVGVKEIDVANRTVDKAKELIAACAADVH 168
Query: 414 --ALHFEYLHEFFPEKGM--ILANASAIGMEPNSDQSPVPKEALKAYELVFDAVYTPRNT 469
AL E E E+G I+ + GM P+ + +P+ +LK +V D +Y P T
Sbjct: 169 SVALSLEKATE---EQGNYDIIIQTTTRGMHPHVEHTPLQICSLKEGTIVSDIIYNPFET 225
Query: 470 RLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRKLVLEQF 518
++L EA E GA + +G++MF+ Q F ++TG + D M++LV+ +
Sbjct: 226 KILCEAKEQGAIIQNGIDMFVYQGALAFEMWTGRVPNIDRMKQLVMRKL 274
>gi|118479500|ref|YP_896651.1| shikimate 5-dehydrogenase [Bacillus thuringiensis str. Al Hakam]
gi|196044711|ref|ZP_03111945.1| shikimate 5-dehydrogenase [Bacillus cereus 03BB108]
gi|229186574|ref|ZP_04313735.1| Shikimate dehydrogenase [Bacillus cereus BGSC 6E1]
gi|376268232|ref|YP_005120944.1| shikimate 5-dehydrogenase [Bacillus cereus F837/76]
gi|166219218|sp|A0RIV1.1|AROE_BACAH RecName: Full=Shikimate dehydrogenase
gi|118418725|gb|ABK87144.1| shikimate dehydrogenase [Bacillus thuringiensis str. Al Hakam]
gi|196024199|gb|EDX62872.1| shikimate 5-dehydrogenase [Bacillus cereus 03BB108]
gi|228596833|gb|EEK54492.1| Shikimate dehydrogenase [Bacillus cereus BGSC 6E1]
gi|364514032|gb|AEW57431.1| Shikimate 5-dehydrogenase I alpha [Bacillus cereus F837/76]
Length = 277
Score = 162 bits (410), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 99/290 (34%), Positives = 155/290 (53%), Gaps = 26/290 (8%)
Query: 238 KIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLVDD--VKEFFRTYSGTDFAGFSVG 295
+++G++ NP+GHS P++HN AF H + Y LV + + E R +GF+V
Sbjct: 3 QLYGVIGNPIGHSLSPVMHNDAFEHLNMDAHYHAFLVKEEVLGEAVRGLKALGISGFNVT 62
Query: 296 IPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALRERQGI 355
PHK + DE+ PLAK IGAVNT++ + +GKL+GYNTD + A++ E
Sbjct: 63 TPHKVAIMDYLDEIDPLAKQIGAVNTVVHK--NGKLIGYNTDGIGFVRALQSISSE---- 116
Query: 356 NGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGARVI-IFNRNYERAKALADA----V 410
P+ K +L+GAGGA RA+ F G + I + NR ++AK L A V
Sbjct: 117 --------PLQEKRILLLGAGGASRAIYFSLADAGVKEIDVANRTVDKAKELIAACTATV 168
Query: 411 SGEALHFEYLHEFFPEKGM--ILANASAIGMEPNSDQSPVPKEALKAYELVFDAVYTPRN 468
AL E + E+G I+ + IGM P + +P+ +LK +V D +Y P
Sbjct: 169 HSVALSLE---KATKEQGSYDIIIQTTTIGMHPRVEHTPLQISSLKKGTIVSDIIYNPFE 225
Query: 469 TRLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRKLVLEQF 518
T++L EA E GA + +G++MF+ Q F ++TG + + M++LV+ +
Sbjct: 226 TKILCEAKEQGAIIQNGIDMFVYQGALAFEMWTGCVPNIERMKQLVIRKL 275
>gi|42783461|ref|NP_980708.1| shikimate 5-dehydrogenase [Bacillus cereus ATCC 10987]
gi|81699667|sp|Q730K1.1|AROE_BACC1 RecName: Full=Shikimate dehydrogenase
gi|42739390|gb|AAS43316.1| shikimate 5-dehydrogenase [Bacillus cereus ATCC 10987]
Length = 277
Score = 162 bits (409), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 99/290 (34%), Positives = 154/290 (53%), Gaps = 26/290 (8%)
Query: 238 KIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLVDD--VKEFFRTYSGTDFAGFSVG 295
+++G++ NP+GHS P++HN AF H + Y LV + + E R +GF+V
Sbjct: 3 QLYGVIGNPIGHSLSPVMHNDAFEHLNMDAHYHAFLVKEEVLGEAVRGLKALGISGFNVT 62
Query: 296 IPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALRERQGI 355
PHK + DE+ PLAK IGAVNT++ + DGKL+GYNTD + A++
Sbjct: 63 TPHKVAIMDYLDEIDPLAKQIGAVNTVVHK--DGKLIGYNTDGIGFVRALQ--------- 111
Query: 356 NGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGARVI-IFNRNYERAKALADA----V 410
+ + P+ K +L+GAGGA RA+ F G + I + NR ++AK L A V
Sbjct: 112 ---SISSKPLQEKRILLLGAGGASRAIYFSLADVGVKEIDVANRTVDKAKELITACKATV 168
Query: 411 SGEALHFEYLHEFFPEKGM--ILANASAIGMEPNSDQSPVPKEALKAYELVFDAVYTPRN 468
AL E E E+G I+ + IGM P + +P+ +L +V D +Y P
Sbjct: 169 HSVALSLEKATE---EQGNYDIIIQTTTIGMHPRVEHTPLQISSLNKGTIVSDIIYNPFE 225
Query: 469 TRLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRKLVLEQF 518
T++L EA E GA + +G++MF+ Q F ++TG + M++LV+ +
Sbjct: 226 TKILCEAKEQGAMIQNGIDMFVYQGALAFEMWTGRTPNIERMKQLVIRKL 275
>gi|386738224|ref|YP_006211405.1| shikimate dehydrogenase [Bacillus anthracis str. H9401]
gi|384388076|gb|AFH85737.1| Shikimate dehydrogenase [Bacillus anthracis str. H9401]
Length = 277
Score = 162 bits (409), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 99/290 (34%), Positives = 155/290 (53%), Gaps = 26/290 (8%)
Query: 238 KIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLVDD--VKEFFRTYSGTDFAGFSVG 295
+++G++ NP+GHS P++HN AF H + + Y LV + + E R +GF+V
Sbjct: 3 QLYGVIGNPIGHSLSPVMHNDAFEHLKMDAHYHAFLVKEEVLGEAVRGLKALGISGFNVT 62
Query: 296 IPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALRERQGI 355
PHK + DE+ PLAK IGAVNT++ + DGKL+GYNTD + A++ E
Sbjct: 63 TPHKVAIMDYLDEIDPLAKQIGAVNTVVHK--DGKLIGYNTDGIGFVRALQSISSE---- 116
Query: 356 NGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGARVI-IFNRNYERAKALADA----V 410
P+ K +L+GAGGA RA+ F G + I + NR ++AK L A V
Sbjct: 117 --------PLQEKRILLLGAGGASRAIYFSLADAGVKEIDVANRTVDKAKELIAACTATV 168
Query: 411 SGEALHFEYLHEFFPEKGM--ILANASAIGMEPNSDQSPVPKEALKAYELVFDAVYTPRN 468
AL E + E+G I+ + I M P + +P+ +LK +V D +Y P
Sbjct: 169 HSVALSLE---KATKEQGNYDIIIQTTTICMHPRVEHTPLQISSLKKGTIVSDIIYNPFE 225
Query: 469 TRLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRKLVLEQF 518
T++L EA E GA + +G++MF+ Q F ++TG + + M++LV+ +
Sbjct: 226 TKILCEAKEQGAIIQNGIDMFVYQGALAFEMWTGCVPNIERMKQLVIRKL 275
>gi|300118673|ref|ZP_07056401.1| shikimate 5-dehydrogenase [Bacillus cereus SJ1]
gi|298723922|gb|EFI64636.1| shikimate 5-dehydrogenase [Bacillus cereus SJ1]
Length = 277
Score = 162 bits (409), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 99/290 (34%), Positives = 155/290 (53%), Gaps = 26/290 (8%)
Query: 238 KIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLVDD--VKEFFRTYSGTDFAGFSVG 295
+++G++ +P+GHS P++HN AF H + Y LV + + E R +GF+V
Sbjct: 3 QLYGVIGDPIGHSLSPVMHNDAFEHLNMDAHYHAFLVKEEVLGEAVRGLKALGISGFNVT 62
Query: 296 IPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALRERQGI 355
PHK + DE+ PLAK IGAVNT++ + DGKL+GYNTD + A++ E
Sbjct: 63 TPHKVAIMDYLDEIDPLAKQIGAVNTVVHK--DGKLIGYNTDGIGFVRALQSISSE---- 116
Query: 356 NGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGARVI-IFNRNYERAKALADA----V 410
P+ K +L+GAGGA RA+ F G + I + NR ++AK L A V
Sbjct: 117 --------PLQEKRILLLGAGGASRAIYFSLADAGVKEIDVANRTVDKAKELIAACTATV 168
Query: 411 SGEALHFEYLHEFFPEKGM--ILANASAIGMEPNSDQSPVPKEALKAYELVFDAVYTPRN 468
AL E + E+G I+ + IGM P + +P+ +LK +V D +Y P
Sbjct: 169 HSVALSLE---KATKEQGNYDIIIQTTTIGMHPRVEHTPLQISSLKNGTIVSDIIYNPFE 225
Query: 469 TRLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRKLVLEQF 518
T++L EA E GA + +G++MF+ Q F ++TG + + M++LV+ +
Sbjct: 226 TKILCEAKEQGAIIQNGIDMFVYQGALAFEMWTGCVPNIERMKQLVIRKL 275
>gi|225866315|ref|YP_002751693.1| shikimate 5-dehydrogenase [Bacillus cereus 03BB102]
gi|254806731|sp|C1ESM8.1|AROE_BACC3 RecName: Full=Shikimate dehydrogenase
gi|225789755|gb|ACO29972.1| shikimate dehydrogenase [Bacillus cereus 03BB102]
Length = 277
Score = 161 bits (408), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 99/290 (34%), Positives = 154/290 (53%), Gaps = 26/290 (8%)
Query: 238 KIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLVDD--VKEFFRTYSGTDFAGFSVG 295
+++G++ NP+GHS P++HN AF H + Y LV + + E R +GF+V
Sbjct: 3 QLYGVIGNPIGHSLSPVMHNDAFEHLNMDAHYHAFLVKEEVLGEAVRGLKALGISGFNVT 62
Query: 296 IPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALRERQGI 355
PHK + DE+ PLAK IGAVNT++ + +GKL GYNTD + A++ E
Sbjct: 63 TPHKVAIMDYLDEIDPLAKQIGAVNTVVHK--NGKLTGYNTDGIGFVRALQSISSE---- 116
Query: 356 NGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGARVI-IFNRNYERAKALADA----V 410
P+ K +L+GAGGA RA+ F G + I + NR ++AK L A V
Sbjct: 117 --------PLQEKRILLLGAGGASRAIYFSLADAGVKEIDVANRTVDKAKELIAACTATV 168
Query: 411 SGEALHFEYLHEFFPEKGM--ILANASAIGMEPNSDQSPVPKEALKAYELVFDAVYTPRN 468
AL E + E+G I+ + IGM P + +P+ +LK +V D +Y P
Sbjct: 169 HSVALSLE---KATKEQGSYDIIIQTTTIGMHPRVEHTPLQISSLKKGTIVSDIIYNPFE 225
Query: 469 TRLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRKLVLEQF 518
T++L EA E GA + +G++MF+ Q F ++TG + + M++LV+ +
Sbjct: 226 TKILCEAKEQGAIIQNGIDMFVYQGALAFEMWTGCVPNIERMKQLVIRKL 275
>gi|262181533|gb|ACY29657.1| 3-dehydroquinate dehydratase 02 [Vitis vinifera]
Length = 187
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 83/189 (43%), Positives = 125/189 (66%), Gaps = 7/189 (3%)
Query: 93 LDLDVEFVEMDYEVASDPLMSEIIYSRS--NTKIIVSSYLNGGGKPTTEKLGDVIACMQA 150
++L ++V+++ +VA + + S I+ R K+IVSS+ N P+ E LG+++ +QA
Sbjct: 1 MELGADYVDIELKVAHEFINS--IHGRKPEKFKVIVSSH-NYQNTPSVEDLGNLVVSIQA 57
Query: 151 TGADVMKLEIAVDSITDLAPVFEMLTHCQVPLIALAVGSRGLISQLLGPKFGGFLVYGSL 210
TGAD++K+ ITD+A +F++ H QVP+I L +G RGLIS++L PKF G+L +GSL
Sbjct: 58 TGADIVKIATTALEITDVARIFQITVHSQVPVIGLVMGERGLISRILCPKFSGYLTFGSL 117
Query: 211 --GGKSVPGLPTLVSLKQVYQLEHINPDTKIFGLVSNPVGHSKGPILHNPAFRHTRFNGI 268
G S PG PT+ L +Y + PDTK+FG++ PV HSK P L+N AF+ FNG+
Sbjct: 118 EPGIVSAPGQPTIKDLLNLYNFRQLGPDTKVFGVIGKPVSHSKSPHLYNEAFKSVGFNGV 177
Query: 269 YVPMLVDDV 277
YV +LVDD+
Sbjct: 178 YVHLLVDDI 186
>gi|330836654|ref|YP_004411295.1| 3-dehydroquinate dehydratase [Sphaerochaeta coccoides DSM 17374]
gi|329748557|gb|AEC01913.1| 3-dehydroquinate dehydratase [Sphaerochaeta coccoides DSM 17374]
Length = 485
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 146/508 (28%), Positives = 235/508 (46%), Gaps = 41/508 (8%)
Query: 10 LVCTQLECETTEEMQASIEQAKVEGADLVELCIDSMEFSHISEVDKLIQHPTLPAIVSYR 69
++C L T E + E+ K + VEL +D +E S L + +P I++ R
Sbjct: 1 MLCLTLTGRTLLENISQYERNK-DWVGAVELRLDYLEESEARLAGSLPEQFPVPMILTCR 59
Query: 70 LKSSRKSSDEACKNT---CLQVLRRALDLDVEFVEMDYEVASDPLMSEIIYSRSNTKIIV 126
R+S C +T L +++ LD F +D E +E + R +II
Sbjct: 60 ----RESDGGLCTSTERKRLSLMKEVLDRGA-FAYVDLEDDLKKTEAEQLARRKGIRIIR 114
Query: 127 SSYLNGGGKPTTEKLGDVIACMQATGA--DVMKLEIAVDSITDLAPVFEMLTHC--QVPL 182
S + + G P D+ A M A D+ KL + ++ D+ +F +
Sbjct: 115 SHH-DFSGMP-----ADIYARMARILAKGDIPKLAVTPHTVEDVIRLFRIKDEIPGSTEK 168
Query: 183 IALAVGSRGLISQLLGPKFGGFLVYG-SLGGKSV-PGLPTLVSLKQVYQLEHINPDTKIF 240
I + +G G+ +++L K G +++ +SV PG+ + L +VY + ++ +T+IF
Sbjct: 169 IVIGMGVLGIPTRILYRKIGSSMMFCCDEAAESVAPGMLSARVLSEVYGADKVDAETEIF 228
Query: 241 GLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLVDDVKEFFRTYSGTDFAGFSVGIPHKE 300
G++ NPV S P++HNP FR + N IY VD V+ FFR D GFSV +P K
Sbjct: 229 GIIGNPVSQSASPLIHNPGFRAIKKNAIYSLFPVDAVRPFFRLADVLDIRGFSVTVPFKR 288
Query: 301 PAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALRERQGINGVAS 360
+ + K IG+ NT++R + G NTD +S + A+
Sbjct: 289 DVIPYLGTISREVKQIGSCNTVVR--VKDLWKGINTDYHGFLSQLMPAI----------- 335
Query: 361 HTSPIAGKI--FVLVGAGGAGRALAFGAKSRGARVIIFNRNYERAKALADAVSGEALHFE 418
+G++ +++GAGGA RA+A+ + ++ I NR+ E A+ LA E
Sbjct: 336 ----TSGRVRTALILGAGGAARAVAWALHNHSVKITILNRSAEAARKLAAETMAGWDVLE 391
Query: 419 YLHEFFPEKGMILANASAIGMEPNSDQSPVPKEALKAYELVFDAVYTPRNTRLLREAAEV 478
+ E+ + MI+ S +GM P+SD+ P E+ +D VY P TR L AAE
Sbjct: 392 NISEYSGKSDMIVQTTS-VGMTPDSDEDPSAGYVFSGKEIAYDLVYKPHQTRFLLRAAEA 450
Query: 479 GATVVSGVEMFIRQALGQFRLFTGGLAP 506
G V+ G +M + Q QF FTG P
Sbjct: 451 GCEVIYGAQMLLEQGKLQFEAFTGYHYP 478
>gi|228923087|ref|ZP_04086379.1| Shikimate dehydrogenase [Bacillus thuringiensis serovar
huazhongensis BGSC 4BD1]
gi|423634842|ref|ZP_17610495.1| shikimate dehydrogenase [Bacillus cereus VD156]
gi|228836585|gb|EEM81934.1| Shikimate dehydrogenase [Bacillus thuringiensis serovar
huazhongensis BGSC 4BD1]
gi|401278828|gb|EJR84758.1| shikimate dehydrogenase [Bacillus cereus VD156]
Length = 277
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 96/287 (33%), Positives = 152/287 (52%), Gaps = 20/287 (6%)
Query: 238 KIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLV--DDVKEFFRTYSGTDFAGFSVG 295
+++G++ NP+GHS P++HN AF H + Y LV +++ E R +GF+V
Sbjct: 3 QLYGVIGNPIGHSLSPVMHNDAFEHLNMDAHYHAFLVKEEELGEAVRGLKALGISGFNVT 62
Query: 296 IPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALRERQGI 355
PHK + DE+ PLAK IGAVNT++ + GKL+GYNTD + A++ E
Sbjct: 63 TPHKVAIMDYLDEIDPLAKQIGAVNTVVHK--GGKLIGYNTDGIGFVRALQSVSSE---- 116
Query: 356 NGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGARVI-IFNRNYERAKALADAVSGEA 414
P+ K +L+GAGGA RA+ F G + I + NR ++AK L A +
Sbjct: 117 --------PLQEKRILLLGAGGASRAIYFSLADVGVKEIDVANRTVDKAKELIAACTATV 168
Query: 415 LHFEY-LHEFFPEKGM--ILANASAIGMEPNSDQSPVPKEALKAYELVFDAVYTPRNTRL 471
L + E+G I+ + IGM P + +P+ +LK +V D +Y P T++
Sbjct: 169 HSVPLSLEKATEEQGNYDIIIQTTTIGMHPRVEHTPLQISSLKKGTIVSDIIYNPFETKI 228
Query: 472 LREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRKLVLEQF 518
L EA E GA + +G++MF+ Q F ++TG + M++LV+ +
Sbjct: 229 LCEAKEQGAIIQNGIDMFVYQGALAFEMWTGRAPNIERMKQLVIRKL 275
>gi|423582542|ref|ZP_17558653.1| shikimate dehydrogenase [Bacillus cereus VD014]
gi|401213421|gb|EJR20162.1| shikimate dehydrogenase [Bacillus cereus VD014]
Length = 277
Score = 159 bits (402), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 97/288 (33%), Positives = 151/288 (52%), Gaps = 22/288 (7%)
Query: 238 KIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLV--DDVKEFFRTYSGTDFAGFSVG 295
+++G++ NP+GHS P++HN AF H + Y LV +++ E R +GF+V
Sbjct: 3 QLYGVIGNPIGHSLSPVMHNDAFEHLNMDAHYHAFLVKEEELGEAVRGLKALGISGFNVT 62
Query: 296 IPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALRERQGI 355
PHK + DE+ PLAK IGAVNT++ + GKL+GYNTD + A++ E
Sbjct: 63 TPHKVAIMDYLDEIDPLAKQIGAVNTVVHK--GGKLIGYNTDGIGFVRALQSVSSE---- 116
Query: 356 NGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGARVI-IFNRNYERAKALADAVSGEA 414
P+ K +L+GAGGA RA+ F G + I + NR ++AK L A +
Sbjct: 117 --------PLQEKRILLLGAGGASRAIYFSLADVGVKEIDVANRTVDKAKELIAACTATV 168
Query: 415 ----LHFEYLHEFFPEKGMILANASAIGMEPNSDQSPVPKEALKAYELVFDAVYTPRNTR 470
L E E E I+ + IGM P + +P+ +LK +V D +Y P T+
Sbjct: 169 HSVPLSLEKATEE-QENYDIIIQTTTIGMHPRVEHTPLQISSLKKGTIVSDIIYNPFETK 227
Query: 471 LLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRKLVLEQF 518
+L EA E GA + +G++MF+ Q F ++TG + M++LV+ +
Sbjct: 228 ILCEAKEQGAIIQNGIDMFVYQGALAFEMWTGRAPNIERMKQLVIRKL 275
>gi|229086905|ref|ZP_04219064.1| Shikimate dehydrogenase [Bacillus cereus Rock3-44]
gi|228696415|gb|EEL49241.1| Shikimate dehydrogenase [Bacillus cereus Rock3-44]
Length = 277
Score = 159 bits (402), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 95/288 (32%), Positives = 156/288 (54%), Gaps = 22/288 (7%)
Query: 238 KIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLVDDVK--EFFRTYSGTDFAGFSVG 295
+++G++ NP+GHS P++HN AF + + Y LV+++ E + +GF+V
Sbjct: 3 QLYGVIGNPIGHSLSPLMHNDAFENCSIDAHYHAFLVEEMALGEAVKGLKALGVSGFNVT 62
Query: 296 IPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALRERQGI 355
PHK + DE+ PLAK IGAVNT+++R D KL+GYNTD + +++ ++
Sbjct: 63 TPHKVSIMKYLDEIDPLAKQIGAVNTVVQR--DEKLIGYNTDGIGYVRSLQSISKD---- 116
Query: 356 NGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGARVI-IFNRNYERAKALADAVSGE- 413
P+ K +L+GAGGA RA+ F G + I I NR E+A L G+
Sbjct: 117 --------PLDQKRILLLGAGGACRAIYFSLADAGVKEIDIANRTVEKANQLIAGCQGKI 168
Query: 414 ---ALHFEYLHEFFPEKGMILANASAIGMEPNSDQSPVPKEALKAYELVFDAVYTPRNTR 470
AL E E +I+ + + IGM P+ +P+ ++LK +V D +Y P T+
Sbjct: 169 TSHALSLEQATEKQKNYDIII-HTTTIGMYPHVQSTPLQIQSLKQGTIVSDIIYNPFETK 227
Query: 471 LLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRKLVLEQF 518
LL++A GA V +G++MF+ Q F ++TG + + M++LV+ +
Sbjct: 228 LLQDAKAQGAIVQNGIDMFVYQGALAFEMWTGRIPNIERMKQLVMRKL 275
>gi|379012573|ref|YP_005270385.1| shikimate dehydrogenase [Acetobacterium woodii DSM 1030]
gi|375303362|gb|AFA49496.1| shikimate dehydrogenase AroE [Acetobacterium woodii DSM 1030]
Length = 286
Score = 159 bits (402), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 93/295 (31%), Positives = 164/295 (55%), Gaps = 24/295 (8%)
Query: 232 HINPDTKIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLV--DDVKEFFRTYSGTDF 289
I+ DTKI+ ++ +P+ S P LHN F+ + +Y+P+ V ++++ + + +F
Sbjct: 2 KISVDTKIYAVIGDPIAQSLSPQLHNGLFKEAGVDALYLPIAVKSENLENLIKGFRVMNF 61
Query: 290 AGFSVGIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDAL 349
GF++ PHK + DE+ PLA+ IGAVNT++ R DGK+ GYNTD I +IE+ +
Sbjct: 62 GGFNITKPHKMEIIKYLDELDPLAQKIGAVNTVVYR--DGKMKGYNTDGFGFIKSIENKI 119
Query: 350 RERQGINGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRG-ARVIIFNRNYERAKALA- 407
++ P +++G GGA +++A G +V+I NR E+A+ LA
Sbjct: 120 VDQ-----------PKEKLNILILGCGGAVKSVAMALADWGINQVMIANRTMEKAETLAA 168
Query: 408 ---DAVSGEALHFEYLHEFFPE---KGMILANASAIGMEPNSDQSPVPKEALKAYELVFD 461
D G+A+ E + I+ N +++GM + ++P+P+ + +L++D
Sbjct: 169 QINDNWPGKAVAIAMETEELKKAAATATIIVNGTSLGMADTATRTPLPQALITKEQLIYD 228
Query: 462 AVYTPRNTRLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRKLVLE 516
+Y+P T+L+++A EVGA +G+EM + Q L F L+T G+ P+ + K +LE
Sbjct: 229 MIYSPAVTQLMKDAREVGAQTENGLEMLLYQGLLAFELWT-GIFPDPQLGKNLLE 282
>gi|398818042|ref|ZP_10576641.1| shikimate 5-dehydrogenase [Brevibacillus sp. BC25]
gi|398028840|gb|EJL22343.1| shikimate 5-dehydrogenase [Brevibacillus sp. BC25]
Length = 283
Score = 159 bits (401), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 114/302 (37%), Positives = 157/302 (51%), Gaps = 40/302 (13%)
Query: 233 INPDTKIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLVD--DVKEFFRTYSGTDFA 290
I TK+ GL +PV HS+ P++HN AF T Y V+ ++++
Sbjct: 2 ITSKTKLVGLFGHPVSHSQSPMMHNTAFSETGLGFAYAAFDVEPENLEDAVAGIRALGLK 61
Query: 291 GFSVGIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALR 350
G +V IPHK + DE+ PLAK IGAVNT++ R DG+L+GYNTD + + L
Sbjct: 62 GINVTIPHKVAIMPMLDEIDPLAKRIGAVNTVVSR--DGRLIGYNTDGMGYVRS----LV 115
Query: 351 ERQGINGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGARVI-IFNRNYERAKALADA 409
E GI + ++ +VGAGGA RA+AF +G R I I NR+ ERA LA
Sbjct: 116 EETGI--------VLEKQVVTMVGAGGAARAVAFTLAEQGVREIRIINRSRERAAVLA-- 165
Query: 410 VSGEALHFEYLHEFFPEK-------------GMILANASAIGMEPNSDQSPVPKEALKAY 456
E++ P K +L N ++IGM PN ++PVP E L +
Sbjct: 166 --------EHVGTIVPTKIVEQGEGAAAIADSSLLINTTSIGMLPNVQETPVPAEWLHSG 217
Query: 457 ELVFDAVYTPRNTRLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRKLVLE 516
V D +Y P TRLL+EA +GATV SG+ MF+ Q F L+TG AP MR++VL+
Sbjct: 218 LTVSDLIYNPLETRLLKEARAIGATVHSGIGMFVNQGALAFELWTGERAPTGVMREVVLQ 277
Query: 517 QF 518
Q
Sbjct: 278 QL 279
>gi|433545542|ref|ZP_20501895.1| shikimate 5-dehydrogenase [Brevibacillus agri BAB-2500]
gi|432183197|gb|ELK40745.1| shikimate 5-dehydrogenase [Brevibacillus agri BAB-2500]
Length = 283
Score = 158 bits (400), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 113/296 (38%), Positives = 161/296 (54%), Gaps = 28/296 (9%)
Query: 233 INPDTKIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYV-----PMLVDDVKEFFRTYSGT 287
I T++ GL +PV HS+ P++HN AF T + Y P ++D R
Sbjct: 2 ITSKTQLVGLFGHPVSHSQSPMMHNAAFAETGLDFAYSAFDVEPEALEDAVAGIRALG-- 59
Query: 288 DFAGFSVGIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIED 347
G +V IPHK + DE+ PLAK IGAVNT++ + DG+L+GYNTD + +
Sbjct: 60 -LRGINVTIPHKVAIMPMLDEIDPLAKRIGAVNTVVSK--DGRLIGYNTDGMGYVRS--- 113
Query: 348 ALRERQGINGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGARVI-IFNRNYERAKAL 406
L E GI + +I ++GAGGA RA+AF +G + I I NR+ ERA L
Sbjct: 114 -LVEETGI--------VLDKQIVTMMGAGGAARAVAFTLAEKGVKEIRIINRSRERAAVL 164
Query: 407 ADAVSGEALHFEYLHEFFPEKGM----ILANASAIGMEPNSDQSPVPKEALKAYELVFDA 462
A+ V G + + + + + +L N ++IGM PN +PVP + L + +V D
Sbjct: 165 AEHV-GTIVPTRIVEQGEGKDAIADSSLLINTTSIGMLPNVQDTPVPADWLHSGLIVSDL 223
Query: 463 VYTPRNTRLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRKLVLEQF 518
+Y P TRLLREA +GATV SGV MF+ Q F L+TG AP + MR++VL+Q
Sbjct: 224 IYNPLETRLLREAQAIGATVHSGVGMFVNQGALAFELWTGTDAPTEVMREVVLQQL 279
>gi|226311576|ref|YP_002771470.1| shikimate 5-dehydrogenase [Brevibacillus brevis NBRC 100599]
gi|254806733|sp|C0ZB07.1|AROE_BREBN RecName: Full=Shikimate dehydrogenase
gi|226094524|dbj|BAH42966.1| shikimate 5-dehydrogenase [Brevibacillus brevis NBRC 100599]
Length = 283
Score = 158 bits (399), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 112/293 (38%), Positives = 161/293 (54%), Gaps = 22/293 (7%)
Query: 233 INPDTKIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLVD--DVKEFFRTYSGTDFA 290
I T++ GL +PV HS+ P++HN AF T Y V+ ++++
Sbjct: 2 ITSKTQLVGLFGHPVSHSQSPMMHNTAFLETGLGFAYAAFDVEPENLEDAVAGIRALGLK 61
Query: 291 GFSVGIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALR 350
G +V IPHK + DE+ PLAK IGAVNT++ R DG+L+GYNTD + + L
Sbjct: 62 GINVTIPHKVAIMPMLDEIDPLAKRIGAVNTVVSR--DGRLIGYNTDGMGYVRS----LV 115
Query: 351 ERQGINGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGARVI-IFNRNYERAKALADA 409
E GI + ++ +VGAGGA RA+AF +G + I I NR+ ERA LA+
Sbjct: 116 EETGI--------VLEKQVVTMVGAGGAARAVAFTLAEQGVKEIRIINRSRERAAVLAEH 167
Query: 410 VSGEALHFEYLHEFFPEKGM----ILANASAIGMEPNSDQSPVPKEALKAYELVFDAVYT 465
V G + + + + E + +L N ++IGM PN ++PVP E L + V D +Y
Sbjct: 168 V-GMIVPTKIVEQGEGEAAIADSSLLINTTSIGMLPNVQETPVPAEWLHSGLTVSDLIYN 226
Query: 466 PRNTRLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRKLVLEQF 518
P TRLL+EA +GATV SG+ MF+ Q F L+TG AP MR++VL+Q
Sbjct: 227 PLETRLLKEARAIGATVHSGIGMFVNQGALAFELWTGEQAPTGVMREVVLQQL 279
>gi|452994696|emb|CCQ93699.1| Shikimate dehydrogenase [Clostridium ultunense Esp]
Length = 287
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 100/294 (34%), Positives = 153/294 (52%), Gaps = 24/294 (8%)
Query: 233 INPDTKIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLV--DDVKEFFRTYSGTDFA 290
++ T ++GL NPV HS P++ AF FN +Y+ + + +KE
Sbjct: 7 VDSKTSLYGLFGNPVAHSLSPVMQQAAFMERGFNAVYLAFAIQKEKLKEAVEAIRALSIQ 66
Query: 291 GFSVGIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALR 350
G +V IP+K + DEV A IGAVNTI + G+L GYNTD + I ++E+
Sbjct: 67 GVNVTIPYKVEVIPFLDEVEEEASIIGAVNTI--KNEGGRLRGYNTDGKGFIRSLEEEFH 124
Query: 351 -ERQGINGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGA-RVIIFNRNYERAKALAD 408
+ +NG ++GAGGA R++A +G R+ I NRN E+A+ LA
Sbjct: 125 PDWSSMNGT-------------ILGAGGAVRSVAVALARKGVKRITIVNRNREKAEELAR 171
Query: 409 AVSG----EALHFEYLHEFFPEKGMILANASAIGMEPNSDQSPVPKEALKAYELVFDAVY 464
+S + +E L +++ N + IGM P+ +++PV +EAL +V + VY
Sbjct: 172 LISAWTSVQVEGWERLSSTLKGSNLLI-NGTPIGMHPHVEETPVAQEALHQDLIVSELVY 230
Query: 465 TPRNTRLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRKLVLEQF 518
TP TRLLREA E GA + G+ MF+ Q F ++TG AP + M ++V E+
Sbjct: 231 TPLYTRLLREAKEKGAKIHPGLMMFVYQGAIAFEIWTGKTAPVNLMEQVVRERL 284
>gi|347755767|ref|YP_004863331.1| shikimate 5-dehydrogenase [Candidatus Chloracidobacterium
thermophilum B]
gi|347588285|gb|AEP12815.1| shikimate 5-dehydrogenase [Candidatus Chloracidobacterium
thermophilum B]
Length = 514
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 141/524 (26%), Positives = 246/524 (46%), Gaps = 48/524 (9%)
Query: 10 LVCTQLECETTEEMQASIEQAKVEGADLVELCIDSMEFSHISEVDKLIQH----PTLPAI 65
++CT + T +++ A++ A AD +EL +D++ + V + + H P +
Sbjct: 1 MICTPIAASTPDDLLAALPVAAAA-ADWLELRLDALHNLSVEAVLRALHHVLPRRPRPVV 59
Query: 66 VSYRLKSSRKSSDEACKNTCLQVLRRALDLDVEFVEMDYEVASDPLMSEIIYSRSNTKII 125
V++R + D + + L+ AL E +++ ++ + L + +++
Sbjct: 60 VTFRPREQGGFRDLSHADR-LRFWHSALTTPAEAFDLETDLIAQLLPTYPPDHPVWARVV 118
Query: 126 VSSYLNGGGKPTTEKLGDVIACMQATGADVMKLEIAVDSITDLAPVFEMLTHCQVPL--- 182
VS + + T + A +KL + V+ D+ +F+ LT
Sbjct: 119 VSHH---DFQATPADIHAFALAHFPPHAGTVKLAVKVNQPDDVCRLFDWLTGTPSATPST 175
Query: 183 ---IALAVGSRGLISQLLGPKFGGFLVY--GSLGGKSVPGLPTLVSLKQVYQLEHINPDT 237
I + +G G+++++LGP +G Y G G PG T L++ ++L ++ T
Sbjct: 176 WQKIPVGMGGLGVLTRILGPAYGARWTYSTGHDGRAVAPGQLTATELRETFRLSSLDRHT 235
Query: 238 KIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLV--DDVKEFFR--TYSGT-----D 288
+ GL+ PV HS LHN AF H N +Y+P+ V DD+ F R + T
Sbjct: 236 IVAGLLGCPVAHSLSKDLHNAAFAHLGLNWVYIPVEVSPDDLAPFLRDAIHPRTRRLPWT 295
Query: 289 FAGFSVGIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGK-LVGYNTDCESAISAIED 347
G+SV +PHK + D + A +GAVNTI+ + G+ L+G NTD A+
Sbjct: 296 VGGYSVTLPHKVAILPYLDRLTATAARVGAVNTIL---VSGQELIGDNTDVAGAMRP--- 349
Query: 348 ALRERQGINGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGARVIIFNRNYERAKALA 407
L++R + G P+A ++GAGGA +A+ G + GA+V +F R+ RA+ L
Sbjct: 350 -LQQRFAVEG-----EPVA-----VLGAGGAAQAVVCGLVAAGAQVTVFARHPARAQDLG 398
Query: 408 DAVSGEALHFEYLHEFFPEKGMILANASAIGMEPNSDQS-PVPKEALKAYELVFDAVYTP 466
+ L +F + + L N + +GM ++ + PVP E L+ V+D +Y P
Sbjct: 399 ARFD---VPIVPLDDFHGRRFVGLVNTTPVGMAGYAEGACPVPPERLEGLAWVYDLIYRP 455
Query: 467 RNTRLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFM 510
R+T LL+ A++ G + G+ M I QA Q +TG PE +
Sbjct: 456 RHTALLQAASQQGIATLDGLPMLIAQAAEQLARWTGRDVPETIL 499
>gi|399046902|ref|ZP_10739090.1| shikimate 5-dehydrogenase [Brevibacillus sp. CF112]
gi|398055052|gb|EJL47144.1| shikimate 5-dehydrogenase [Brevibacillus sp. CF112]
Length = 283
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 113/296 (38%), Positives = 160/296 (54%), Gaps = 28/296 (9%)
Query: 233 INPDTKIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYV-----PMLVDDVKEFFRTYSGT 287
I T++ GL +PV HS P++HN AF T + Y P ++D R
Sbjct: 2 ITSKTQLVGLFGHPVSHSLSPMMHNAAFAETGLDFAYSAFDVEPEALEDAVAGIRALG-- 59
Query: 288 DFAGFSVGIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIED 347
G +V IPHK + DE+ PLAK IGAVNT++ + DG+L+GYNTD + +
Sbjct: 60 -LRGINVTIPHKVAIMPMLDEIDPLAKRIGAVNTVVSK--DGRLIGYNTDGMGYVRS--- 113
Query: 348 ALRERQGINGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGARVI-IFNRNYERAKAL 406
L E GI + +I ++GAGGA RA+AF +G + I I NR+ ERA L
Sbjct: 114 -LVEETGI--------VLDKQIVTMMGAGGAARAVAFTLAEKGVKEIRIINRSRERAAVL 164
Query: 407 ADAVSGEALHFEYLHEFFPEKGM----ILANASAIGMEPNSDQSPVPKEALKAYELVFDA 462
A+ V G + + + + + +L N ++IGM PN +PVP + L + +V D
Sbjct: 165 AEHV-GTIVPTRIVEQGEGKDAIADSSLLINTTSIGMLPNVQDTPVPADWLHSGLIVSDL 223
Query: 463 VYTPRNTRLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRKLVLEQF 518
+Y P TRLLREA +GATV SGV MF+ Q F L+TG AP + MR++VL+Q
Sbjct: 224 IYNPLETRLLREAQAIGATVHSGVGMFVNQGALAFELWTGTDAPTEVMREVVLQQL 279
>gi|152976764|ref|YP_001376281.1| shikimate 5-dehydrogenase [Bacillus cytotoxicus NVH 391-98]
gi|189046305|sp|A7GT28.1|AROE_BACCN RecName: Full=Shikimate dehydrogenase
gi|152025516|gb|ABS23286.1| shikimate 5-dehydrogenase [Bacillus cytotoxicus NVH 391-98]
Length = 277
Score = 154 bits (390), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 97/288 (33%), Positives = 152/288 (52%), Gaps = 22/288 (7%)
Query: 238 KIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLVDD--VKEFFRTYSGTDFAGFSVG 295
+++G++ NP+GHS P++HN AF H + Y LV++ + E + +G +V
Sbjct: 3 QLYGVIGNPIGHSLSPLMHNDAFEHLGIDAHYHAFLVEEEMLGEAVKGLKALGVSGINVT 62
Query: 296 IPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALRERQGI 355
PHK + DE+ PLAK IGAVNT++ R +GKLVGYNTD + +++ +E
Sbjct: 63 TPHKVAIMKYLDEIDPLAKQIGAVNTVVHR--NGKLVGYNTDGIGYVRSLQAISKE---- 116
Query: 356 NGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGARVI-IFNRNYERAKAL----ADAV 410
P+ K +L+GAGGA RA+ + G + I I NR E AK L + V
Sbjct: 117 --------PLRHKRMLLLGAGGACRAIYCSLVAAGVKEIDIANRTVETAKQLIASSKERV 168
Query: 411 SGEALHFEYLHEFFPEKGMILANASAIGMEPNSDQSPVPKEALKAYELVFDAVYTPRNTR 470
+AL E E E +L + IGM P+ +P+ +LK +V D +Y P T+
Sbjct: 169 VSKALSLEKATEA-QENYDVLIQTTTIGMHPHVQHTPMQIGSLKQGAIVSDIIYNPFETK 227
Query: 471 LLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRKLVLEQF 518
L +A GA V +G++MF+ Q F ++TG + + M++LV+ +
Sbjct: 228 FLHDAKLSGAIVQNGIDMFVYQGALAFEMWTGMMPDINRMKQLVIRKL 275
>gi|158523119|ref|YP_001530989.1| shikimate 5-dehydrogenase [Desulfococcus oleovorans Hxd3]
gi|158511945|gb|ABW68912.1| shikimate 5-dehydrogenase [Desulfococcus oleovorans Hxd3]
Length = 286
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 101/301 (33%), Positives = 155/301 (51%), Gaps = 29/301 (9%)
Query: 230 LEHINPDTKIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLVDDVKEFFRTYSG-TD 288
+ ++ T++ ++ NPV HS P +HN AF N +YV V+DV +
Sbjct: 1 MHSVDTATRLCAVIGNPVEHSLSPAIHNAAFAARNLNFVYVAFRVNDVGPALAGMRALEN 60
Query: 289 FAGFSVGIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDA 348
F G S+ IPHK A+ DE+ L +++GA+NT++ G+L G NTD A+ A+++A
Sbjct: 61 FRGMSITIPHKISAIGHVDEITDLDRAMGAINTVVNE--KGRLTGSNTDGPGALKALKNA 118
Query: 349 LRERQGINGVASHTSPIAGKIFVLVGAGGAGRALAF--GAKSRGARVIIFNRNYE-RAKA 405
GV + +GK +++GAGG RA+AF ++ A +++ + + R +
Sbjct: 119 --------GVET-----SGKTVLMLGAGGVARAIAFTLAWQADIAELVLLDIDSALREQL 165
Query: 406 LADAVSGEALHFEYLHEFFPEKGMILANASA--------IGMEPNSDQSPVPKEALKAYE 457
+D +G + F K + A A A +GM P +D S VP + +
Sbjct: 166 SSDLKNGTSATITA--AGFENKALAHAMARADIVIHCTPVGMHPKTDASLVPPDLFRPGM 223
Query: 458 LVFDAVYTPRNTRLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRKLVLEQ 517
VFD VY P T+LL EAA G VSGVE+F+ QA+ QF FTG P D MR++V+E
Sbjct: 224 AVFDVVYNPLETKLLTEAAAFGLKTVSGVELFVNQAVLQFEKFTGETGPADVMRRVVMEH 283
Query: 518 F 518
Sbjct: 284 L 284
>gi|336234612|ref|YP_004587228.1| shikimate dehydrogenase [Geobacillus thermoglucosidasius C56-YS93]
gi|335361467|gb|AEH47147.1| Shikimate dehydrogenase [Geobacillus thermoglucosidasius C56-YS93]
Length = 277
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 98/288 (34%), Positives = 147/288 (51%), Gaps = 22/288 (7%)
Query: 238 KIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLVD--DVKEFFRTYSGTDFAGFSVG 295
K++ L PV HS P++HN AF+H Y V+ +K+ +G +V
Sbjct: 3 KLYALFGCPVHHSLSPLMHNDAFQHMNIAARYHAFHVEPKHLKDAINGVRALGISGLNVT 62
Query: 296 IPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALRERQGI 355
IPHK + D++ P+A+ IGAVNTI+ +G+L+GYNTD + A+E+ +
Sbjct: 63 IPHKTAVIPLLDDIDPVARRIGAVNTIVNE--NGRLIGYNTDGPGYVQALEEEV------ 114
Query: 356 NGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGARVI-IFNRNYERAKALAD----AV 410
H I GK +++GAGGA R + F +GA+ I I NR +AK L D AV
Sbjct: 115 -----HID-IKGKRILVIGAGGAARGIYFSLVDKGAKQIDICNRTVSKAKQLIDECDAAV 168
Query: 411 SGEALHFEYLHEFFPEKGMILANASAIGMEPNSDQSPVPKEALKAYELVFDAVYTPRNTR 470
S A E E IL N +++GM P+ ++ P+ +K +V D +Y P T+
Sbjct: 169 SSAACSLNEAEERLGEYD-ILINTTSVGMYPHMEEMPLSLANMKEGTVVSDIIYNPLETK 227
Query: 471 LLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRKLVLEQF 518
L+EA A V +GV MF+ Q F +TG + M+K+V+EQ
Sbjct: 228 WLKEARRRKAIVQNGVGMFVYQGALAFEKWTGAFPDVERMKKIVMEQL 275
>gi|337289037|ref|YP_004628509.1| Shikimate dehydrogenase [Thermodesulfobacterium sp. OPB45]
gi|334902775|gb|AEH23581.1| Shikimate dehydrogenase [Thermodesulfobacterium geofontis OPF15]
Length = 274
Score = 152 bits (385), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 91/283 (32%), Positives = 151/283 (53%), Gaps = 24/283 (8%)
Query: 238 KIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLV--DDVKEFFRTYSGTDFAGFSVG 295
+++G++ +PV HS PI+HN AFR +Y V D + + + G SV
Sbjct: 3 EVYGIIGDPVSHSLSPIMHNLAFREKNIRAVYGAFRVSADQLAKAVEGIKALNIKGLSVT 62
Query: 296 IPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALRERQGI 355
IPHKE + DE+ +A IGAVNT++ + +G L GYNTD I A E +
Sbjct: 63 IPHKEKIIEYLDEIDEIAYEIGAVNTVLNK--EGILKGYNTDWIGVIKAFE--------V 112
Query: 356 NGVASHTSPIAGKIFVLVGAGGAGRALAFG-AKSRGARVIIFNRNYERAKALADAVSGEA 414
NGV I V++GAGGA +A+ + KS+ ++ ++NR +E+AK L + A
Sbjct: 113 NGVELRDKKI-----VVIGAGGASKAVIYALIKSKAKKIHVYNRTFEKAKILEEKFKIIA 167
Query: 415 LHFEYLHEFFPEKGMILANASAIGMEPNSDQSPVPKEALKAYELVFDAVYTPRNTRLLRE 474
+E E +G I+ +++G++ S ++PV +E + +++ D VY P T+ L
Sbjct: 168 KPWE---ELKNAEGDIIIQTTSVGLK--SWETPVEEEIISRFKVAMDIVYLPLKTKFLSI 222
Query: 475 AAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRKLVLEQ 517
A G ++ G++M + Q + QF+L+TG P + M+K + E+
Sbjct: 223 AERYG-KIIDGLQMLLYQGVEQFKLWTGIEPPVELMKKALYEE 264
>gi|312110148|ref|YP_003988464.1| shikimate 5-dehydrogenase [Geobacillus sp. Y4.1MC1]
gi|423719183|ref|ZP_17693365.1| shikimate 5-dehydrogenase [Geobacillus thermoglucosidans
TNO-09.020]
gi|311215249|gb|ADP73853.1| shikimate 5-dehydrogenase [Geobacillus sp. Y4.1MC1]
gi|383368086|gb|EID45361.1| shikimate 5-dehydrogenase [Geobacillus thermoglucosidans
TNO-09.020]
Length = 277
Score = 152 bits (385), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 98/288 (34%), Positives = 146/288 (50%), Gaps = 22/288 (7%)
Query: 238 KIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLVD--DVKEFFRTYSGTDFAGFSVG 295
K++ L PV HS P++HN AF+H Y V+ +K+ +G +V
Sbjct: 3 KLYALFGCPVHHSLSPLMHNDAFQHMNIAARYHAFHVEPKQLKDAINGVRALGISGLNVT 62
Query: 296 IPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALRERQGI 355
IPHK + D++ P A+ IGAVNTI+ +G+L+GYNTD + A+E+ +
Sbjct: 63 IPHKTAVIPLLDDIDPAARRIGAVNTIVNE--NGRLIGYNTDGPGYVQALEEEV------ 114
Query: 356 NGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGARVI-IFNRNYERAKALAD----AV 410
H I GK +++GAGGA R + F +GA+ I I NR +AK L D AV
Sbjct: 115 -----HID-IKGKRILVIGAGGAARGIYFSLVDKGAKQIDICNRTVSKAKQLIDECDAAV 168
Query: 411 SGEALHFEYLHEFFPEKGMILANASAIGMEPNSDQSPVPKEALKAYELVFDAVYTPRNTR 470
S A E E IL N +++GM P+ ++ P+ +K +V D +Y P T+
Sbjct: 169 SSAACSLNEAEERLGEYD-ILINTTSVGMYPHMEEMPLSLANMKEGTVVSDIIYNPLETK 227
Query: 471 LLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRKLVLEQF 518
L+EA A V +GV MF+ Q F +TG + M+K+V+EQ
Sbjct: 228 WLKEARRRKAIVQNGVGMFVYQGALAFEKWTGAFPDVERMKKIVMEQL 275
>gi|298675580|ref|YP_003727330.1| shikimate 5-dehydrogenase [Methanohalobium evestigatum Z-7303]
gi|298288568|gb|ADI74534.1| shikimate 5-dehydrogenase [Methanohalobium evestigatum Z-7303]
Length = 275
Score = 152 bits (385), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 102/287 (35%), Positives = 149/287 (51%), Gaps = 24/287 (8%)
Query: 239 IFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLVDDVKEFFRTYSGTD---FAGFSVG 295
+FG+ +PV HS P +HN AF + IY VD K +G + F G ++
Sbjct: 4 VFGVFGDPVEHSLSPDMHNAAFSELGMDSIYHAFRVDK-KSLEYALNGANAMGFGGVNIT 62
Query: 296 IPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALRERQGI 355
+P K+ A+ + PLA IGAVNTI R + ++GYNTD A AI DA G+
Sbjct: 63 VPLKQEALKFVN-TDPLASKIGAVNTIDFRN-ENDMIGYNTDGVGARRAIADA-----GV 115
Query: 356 NGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGARVIIFNRNYERAKALADAV----S 411
+ + K +++GAGGA RA+ F + GA +II NR +A LA+ V +
Sbjct: 116 D--------VKNKNILILGAGGASRAICFQFANDGADLIIANRTESKALELAEDVKSVGN 167
Query: 412 GEALHFEYLHEFFPEKGMILANASAIGMEPNSDQSPVPKEALKAYELVFDAVYTPRNTRL 471
+ F L E E IL N + +GM PN+ + + E + + +VFD VY P TRL
Sbjct: 168 ARGIGFSNLEELIAESD-ILINTTTVGMHPNTKDTIITSEHMHSGLVVFDIVYNPLETRL 226
Query: 472 LREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRKLVLEQF 518
L+EA GA V+G+ MF+ Q F+++TG P + M+ VLE+
Sbjct: 227 LKEAKSAGAIPVNGLMMFVYQGAEAFKIWTGENPPIEVMKNTVLEEL 273
>gi|20093557|ref|NP_613404.1| shikimate 5-dehydrogenase [Methanopyrus kandleri AV19]
gi|24211502|sp|Q8TZ24.1|AROE_METKA RecName: Full=Shikimate dehydrogenase
gi|19886404|gb|AAM01334.1| Shikimate 5-dehydrogenase [Methanopyrus kandleri AV19]
Length = 290
Score = 152 bits (384), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 109/299 (36%), Positives = 157/299 (52%), Gaps = 29/299 (9%)
Query: 233 INPDTKIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLV--DDVKEFFRTYSGTDFA 290
++ +T + GL+ +PV HS P +HN AF+ N +Y+ V + ++ R +
Sbjct: 7 VDAETNVVGLIGHPVEHSLSPAMHNAAFKELGLNYVYLAFDVPPERLEGAVRGAADLGIV 66
Query: 291 GFSVGIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALR 350
G +V IPHKE + CDE+ A+ IGAVNT+ R GK+ G+NTD E + A LR
Sbjct: 67 GLNVTIPHKEAVMELCDELDRDAELIGAVNTV--RFSRGKIEGFNTDGEGFLRA----LR 120
Query: 351 ERQGINGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGA-RVIIFNRNYERAKALAD- 408
E ++ P G V++GAGGA RA++F + GA ++I NR +RA+ LA+
Sbjct: 121 EE-------TYFDP-RGTKSVILGAGGAARAVSFKLATEGADEIVIANRTVDRAERLAEE 172
Query: 409 -----AVSGEALHF---EYLHEFFPEKGMILANASAIGMEPNSDQSP-VPKEALKAYELV 459
V A+ E E +L +A+ +GM PN D+ P V + + +V
Sbjct: 173 LKEKVGVKARAIGLDGDEIEREL--RDADLLVDATPVGMYPNEDEPPLVTADQMHEDLIV 230
Query: 460 FDAVYTPRNTRLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRKLVLEQF 518
D VY P TRLL EA + GAT VSGV M + Q F L+TG AP + MR+ VLE
Sbjct: 231 NDLVYNPPRTRLLEEAEKAGATPVSGVGMLVYQGALAFELWTGEEAPVEVMREAVLEHL 289
>gi|20807710|ref|NP_622881.1| shikimate 5-dehydrogenase [Thermoanaerobacter tengcongensis MB4]
gi|254479120|ref|ZP_05092471.1| shikimate 5-dehydrogenase [Carboxydibrachium pacificum DSM 12653]
gi|24211499|sp|Q8RAG2.1|AROE_THETN RecName: Full=Shikimate dehydrogenase
gi|20516261|gb|AAM24485.1| Shikimate 5-dehydrogenase [Thermoanaerobacter tengcongensis MB4]
gi|214034934|gb|EEB75657.1| shikimate 5-dehydrogenase [Carboxydibrachium pacificum DSM 12653]
Length = 280
Score = 152 bits (384), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 98/289 (33%), Positives = 149/289 (51%), Gaps = 30/289 (10%)
Query: 233 INPDTKIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYV-----PMLVDDVKEFFRTYSGT 287
I+ TK+FGL+ +PV HS P++HN +F FNG+YV P L+++ +
Sbjct: 3 IDSTTKVFGLIGHPVKHSLSPLIHNSSFEKLNFNGVYVVFDVAPELLENA---VKGLKAL 59
Query: 288 DFAGFSVGIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIED 347
GF+V +PHKE + D V A+ IGAVNT++ +G L GYNTD + I D
Sbjct: 60 GIKGFNVTVPHKESVMNYLDFVTEEAEKIGAVNTVVNE--NGILKGYNTDVQGFI----D 113
Query: 348 ALRERQGINGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGAR-VIIFNRNYERAKAL 406
+L+E + + G+ ++GAGGA +A+ F G ++I NR +AKAL
Sbjct: 114 SLKELK---------EDVRGRKAFVLGAGGASKAICFALAREGVESIVIANRTLNKAKAL 164
Query: 407 ADAVSGE-ALHFEYLH----EFFPEKGMILANASAIGMEPNSDQSPVPKEALKAYELVFD 461
A+ + E + +Y E F E IL N +++GM P SPV +E + V+D
Sbjct: 165 AEYIREEFKMKCDYCSIEEVEKFNEID-ILINTTSVGMHPEVGNSPVSEEVVAKANFVYD 223
Query: 462 AVYTPRNTRLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFM 510
+Y P T L+ A + G +G+ M + QA F L+TG +DF+
Sbjct: 224 LIYNPSETLFLKYARKNGVKSANGLSMLVNQASYAFYLWTGEFFDKDFV 272
>gi|408419445|ref|YP_006760859.1| shikimate dehydrogenase AroE [Desulfobacula toluolica Tol2]
gi|405106658|emb|CCK80155.1| AroE: shikimate dehydrogenase [Desulfobacula toluolica Tol2]
Length = 281
Score = 152 bits (383), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 93/295 (31%), Positives = 149/295 (50%), Gaps = 27/295 (9%)
Query: 233 INPDTKIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLVDDVKEFFRTYSGTDFAGF 292
I+ TK++ + PV HSK P++HN F+ N +Y+ +D++ + + + G
Sbjct: 2 IDSKTKLYCIFGKPVTHSKSPLIHNACFQKHHMNSVYLAFEIDEISDGVKAMRTLNIKGA 61
Query: 293 SVGIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALRER 352
SV IP KE + DE+ A SIGAVNT++ R +GKL+GYNTD ++A+S LR
Sbjct: 62 SVTIPFKESIMKYLDEIDEEALSIGAVNTVVNR--NGKLIGYNTDYKAAVS----PLRPF 115
Query: 353 QGINGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGARVIIFNRNYERAKALADAVSG 412
+N K+ ++ G A K +G +++I NRN ER K LA +
Sbjct: 116 CIMN----------KKVCIIGAGGAAQAVAYGIHKEKG-KLVIINRNKERGKKLASKYNA 164
Query: 413 EALHFEYLHEFFPEKGM----------ILANASAIGMEPNSDQSPVPKEALKAYELVFDA 462
E + + +++ K I+ N ++IGM P+ + P L + +V D
Sbjct: 165 EFISMDKMNQTEINKDAINKTGIINADIIINTTSIGMSPDIETCAFPSTLLDSRMIVMDI 224
Query: 463 VYTPRNTRLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRKLVLEQ 517
VYTP T+LL A G T + G+ MF+ Q QF+L+T L MR+ ++++
Sbjct: 225 VYTPLKTKLLSIAQSKGCTTIDGLSMFLHQGAAQFKLWTDILPDIKLMRQTIIKE 279
>gi|18978065|ref|NP_579422.1| shikimate 5-dehydrogenase [Pyrococcus furiosus DSM 3638]
gi|397652658|ref|YP_006493239.1| shikimate 5-dehydrogenase [Pyrococcus furiosus COM1]
gi|24211503|sp|Q8U0A6.1|AROE_PYRFU RecName: Full=Shikimate dehydrogenase
gi|18893854|gb|AAL81817.1| shikimate 5-dehydrogenase [Pyrococcus furiosus DSM 3638]
gi|393190249|gb|AFN04947.1| shikimate 5-dehydrogenase [Pyrococcus furiosus COM1]
Length = 271
Score = 152 bits (383), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 100/285 (35%), Positives = 147/285 (51%), Gaps = 24/285 (8%)
Query: 233 INPDTKIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLVD-DVKEFFRTYSGTDFAG 291
IN +TKI+G++ NPV HS PI+HN F+ N IYVP V D+K D G
Sbjct: 2 INGETKIYGIIGNPVKHSLSPIMHNALFKKFGINAIYVPFEVKKDLKNAINGVKALDIQG 61
Query: 292 FSVGIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALRE 351
+V +P+KE + DE+ +++IG+VNT++ ++GKLVGY TD A A+E +
Sbjct: 62 VNVTMPYKEEVIKFLDELSEDSQNIGSVNTVVN--LEGKLVGYTTDGIGARRALE-RFTQ 118
Query: 352 RQGINGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGARVIIFNRNYERAKALAD-AV 410
G N +L+ G S+ A V++ NR E+AK L +
Sbjct: 119 VDGAN--------------ILILGAGGAGKAIAYELSKVANVVVLNRTIEKAKRLEKFGI 164
Query: 411 SGEALHFEYLHEFFPEKGMILANASAIGMEPNSDQSPVPKEALKAYELVFDAVYTPRNTR 470
G++L ++ E IL NA+++GM N ++S VPK L+ +V D VY P NT
Sbjct: 165 VGDSLE---ALPYYVEWADILINATSVGM--NEEKSLVPKNLLRPGLVVMDIVYKPLNTL 219
Query: 471 LLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRKLVL 515
LLR A E G + G+ M + Q FRL+TG + MR++ L
Sbjct: 220 LLRYAQEKGCIAIDGLWMLVYQGAESFRLWTGEEGDVELMRRVAL 264
>gi|373859117|ref|ZP_09601849.1| shikimate 5-dehydrogenase [Bacillus sp. 1NLA3E]
gi|372451208|gb|EHP24687.1| shikimate 5-dehydrogenase [Bacillus sp. 1NLA3E]
Length = 279
Score = 151 bits (382), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 94/288 (32%), Positives = 148/288 (51%), Gaps = 23/288 (7%)
Query: 238 KIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLV--DDVKEFFRTYSGTDFAGFSVG 295
K+FG++ +P+ HS PI+ N F++ + Y P V +++ + + +GF++
Sbjct: 3 KLFGVIGDPIAHSMSPIMQNDLFQNYSMDAHYFPFHVKKEELVDAIKGLKSLGVSGFNIT 62
Query: 296 IPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALRERQGI 355
+PHK + D++ PLA +IGAVNT++ IDGKL G+NTD +
Sbjct: 63 VPHKVAIIPLLDQIDPLASAIGAVNTVVN--IDGKLTGFNTDGNGYV------------- 107
Query: 356 NGVASHTSPIAGKIFVLVGAGGAGRALAFG-AKSRGARVIIFNRNYERAKALADA----V 410
G+ + + K +++GAGGA RAL F AK+ R+ I NR +A L + V
Sbjct: 108 RGLTEQITNLQDKSVLMIGAGGAARALYFSLAKAGVKRLDICNRTKVKAYTLIEECPYHV 167
Query: 411 SGEALHFEYLHEFFPEKGMILANASAIGMEPNSDQSPVPKEALKAYELVFDAVYTPRNTR 470
A + E E +I+ S IGM P+++ P+ E LKA V D +Y P T
Sbjct: 168 DSTAYEMKEAEERLGEYDVIIQTTS-IGMSPHTEDIPLSLEHLKAGTFVSDIIYNPLETA 226
Query: 471 LLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRKLVLEQF 518
LLREA + GA + +G++MF+ Q F ++TG D M+ +V Q
Sbjct: 227 LLREAKQKGAIIQNGLDMFVFQGALAFEIWTGIFPDTDRMKNIVEMQL 274
>gi|297616585|ref|YP_003701744.1| shikimate 5-dehydrogenase [Syntrophothermus lipocalidus DSM 12680]
gi|297144422|gb|ADI01179.1| shikimate 5-dehydrogenase [Syntrophothermus lipocalidus DSM 12680]
Length = 291
Score = 151 bits (382), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 101/296 (34%), Positives = 159/296 (53%), Gaps = 28/296 (9%)
Query: 232 HINPDTKIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLVDD--VKEFFRTYSGTDF 289
+ DT++ G++ NP+GHS P +HN A H R N +YVP +VD+ +KE
Sbjct: 2 QVKADTRVLGIIGNPLGHSLSPQMHNRALEHLRLNYVYVPFVVDNHALKEAVDGIRALGI 61
Query: 290 AGFSVGIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDAL 349
G +V IP KE + D++ A+ GA N + + GKLVGYNTD ++++++
Sbjct: 62 DGVNVTIPFKEAVIGYLDDLSEEARWCGAANVV--KNCGGKLVGYNTDGAGFMASLQE-- 117
Query: 350 RERQGINGVASHTSPIAGKIFVLVGAGGAGRALAFG-AKSRGARVIIFNRNYERAKALAD 408
QG+ P G+ V++GAGGA RA+ + ++ +++ NR+ +RA+ALA
Sbjct: 118 ---QGV-------LP-GGQRVVVLGAGGAARAITYHLVQAEVESLVLINRSVDRAEALAG 166
Query: 409 AVSG------EALHFEY--LHEFFPEKGMILANASAIGMEPN-SDQSPVPKEALKAYELV 459
+ G +A+ +E L E E +++ N ++IGM P + P+ E +V
Sbjct: 167 ELEGIGDVPVKAVGWERACLQEAIEEADLLI-NTTSIGMYPWIREMPPLDPEWFHPGLVV 225
Query: 460 FDAVYTPRNTRLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRKLVL 515
D VY P TRLL EA+ G V+GV MF+ Q F+L TG AP + MR++V+
Sbjct: 226 CDIVYNPIQTRLLMEASMRGLKTVNGVGMFVHQGALAFQLLTGVAAPLEVMREVVI 281
>gi|365157945|ref|ZP_09354189.1| shikimate 5-dehydrogenase [Bacillus smithii 7_3_47FAA]
gi|363622355|gb|EHL73521.1| shikimate 5-dehydrogenase [Bacillus smithii 7_3_47FAA]
Length = 282
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 96/288 (33%), Positives = 148/288 (51%), Gaps = 22/288 (7%)
Query: 238 KIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLV--DDVKEFFRTYSGTDFAGFSVG 295
K++G++ +P+ HS P +HN AF Y P V +D+K+ GF+V
Sbjct: 3 KLYGVIGDPIAHSMSPAMHNDAFSRLGIPAYYHPFHVKPNDLKKAVEGMKAIGVEGFNVT 62
Query: 296 IPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALRERQGI 355
IPHK + DE+ PLA++IGAVNT++R+ + + +GYNTD + + +++ L
Sbjct: 63 IPHKTAIIPLLDELDPLAEAIGAVNTVVRK--NDRWIGYNTDGDGFVRGLKETL------ 114
Query: 356 NGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGARVI-IFNRNYERAKALADAVSGEA 414
G H I +++GAGGA RA+ + S R+I I NR E+A LA+ E
Sbjct: 115 -GRDLHLDHI-----LIIGAGGAARAIYYTLASEHVRLIDIANRTMEKAARLAEQCPFET 168
Query: 415 LHFEYLHEFFPEKGM----ILANASAIGMEPNSDQSPVPKEALKAYELVFDAVYTPRNTR 470
L E+ M I+ ++IGM P +D+ P+ LK V D +Y P T+
Sbjct: 169 -KTNVLSISEAEQRMGNYSIVIQTTSIGMSPKTDEMPLSLSLLKKGTFVSDIIYNPLETK 227
Query: 471 LLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRKLVLEQF 518
L EA + GA +G++MF+ Q + F +TG + M K+VLEQ
Sbjct: 228 FLAEAKKQGAITQNGIKMFVYQGVSAFEKWTGVSPDANRMEKIVLEQL 275
>gi|125973371|ref|YP_001037281.1| shikimate dehydrogenase [Clostridium thermocellum ATCC 27405]
gi|256004347|ref|ZP_05429328.1| shikimate 5-dehydrogenase [Clostridium thermocellum DSM 2360]
gi|385778715|ref|YP_005687880.1| shikimate 5-dehydrogenase [Clostridium thermocellum DSM 1313]
gi|419722931|ref|ZP_14250067.1| shikimate 5-dehydrogenase [Clostridium thermocellum AD2]
gi|419724721|ref|ZP_14251780.1| shikimate 5-dehydrogenase [Clostridium thermocellum YS]
gi|125713596|gb|ABN52088.1| shikimate 5-dehydrogenase [Clostridium thermocellum ATCC 27405]
gi|255991631|gb|EEU01732.1| shikimate 5-dehydrogenase [Clostridium thermocellum DSM 2360]
gi|316940395|gb|ADU74429.1| shikimate 5-dehydrogenase [Clostridium thermocellum DSM 1313]
gi|380771940|gb|EIC05801.1| shikimate 5-dehydrogenase [Clostridium thermocellum YS]
gi|380780988|gb|EIC10650.1| shikimate 5-dehydrogenase [Clostridium thermocellum AD2]
Length = 298
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 96/299 (32%), Positives = 152/299 (50%), Gaps = 28/299 (9%)
Query: 232 HINPDTKIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLV--DDVKEFFRTYSGTDF 289
+ TK+ GLV NPV HS P LHN + +Y+P+ V +D++ + DF
Sbjct: 6 RVTGKTKLLGLVGNPVEHSISPQLHNTLSSLLGLDIVYIPLAVGKEDLETVVKALKALDF 65
Query: 290 AGFSVGIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDAL 349
GF+V IP+K + DE A +GAVNT+ + IDG+L GYNTD E + +
Sbjct: 66 IGFNVTIPYKRDIMKYLDENSKEAILMGAVNTV--KKIDGRLYGYNTDAEGFLRS----F 119
Query: 350 RERQGINGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGA-RVIIFNRNYERAKALAD 408
+E G+ GK VL+GAGG RA+A S A ++ + NR E++ LA+
Sbjct: 120 KEEAGVG--------FKGKKVVLIGAGGVARAIAVKIASEDAEKISVVNRTVEKSVELAE 171
Query: 409 AVSGEALHFEYLHEF--------FPEKGMILANASAIGMEPNSDQSPVP-KEALKAYELV 459
V+ ++ F F E +I+ N +++GM P + ++PV E ++V
Sbjct: 172 VVNENIKEIVQVYNFEDKTFRMAFEESDIII-NTTSVGMYPKTRETPVKFTECFNKNQIV 230
Query: 460 FDAVYTPRNTRLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRKLVLEQF 518
+D +Y P T+ L +A + GA +++G+ M Q + + ++TG ED + K V E F
Sbjct: 231 YDVIYNPEKTKFLNDAEKRGAKIINGLGMLFYQGISAYEIWTGVKFTEDKL-KSVYESF 288
>gi|390956953|ref|YP_006420710.1| 3-dehydroquinate dehydratase [Terriglobus roseus DSM 18391]
gi|390411871|gb|AFL87375.1| 3-dehydroquinate dehydratase [Terriglobus roseus DSM 18391]
Length = 512
Score = 150 bits (379), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 121/438 (27%), Positives = 206/438 (47%), Gaps = 32/438 (7%)
Query: 86 LQVLRRALDLDVEFVEMDYEVASDPLMSEIIYSRSNTKIIVSSYLNGGGKPTTEKLGDVI 145
+ +LR A V+++ E A + + + R ++ S+ + P E V+
Sbjct: 96 IAILREAALAGCRLVDIEVETAEELGQAALEELRGAGAAVILSWHDFQATPELEP---VL 152
Query: 146 ACMQATGADVMKLEIAVDSITDLAPVFEMLTH--CQVPLIALAVGSRGLISQLLGPKFGG 203
M+ DV K+ ++ D + ++L + L+A+++G +G ++++LGP+FG
Sbjct: 153 ERMRPFAPDVYKIVPTAKTLRDALRLIDVLEKHGGEGNLVAMSMGFKGTLTRVLGPRFGS 212
Query: 204 FLVYGSLGGK--SVPGLPTLVSLKQVYQLEHINPDTKIFGLVSNPVGHSKGPILHNPAFR 261
+ S G + PG ++ L+++Y+++ I+ T I+ + P+ S P + N AF
Sbjct: 213 LFTFASADGHGGTAPGQVSVSVLRELYRVDEISSQTAIYAVAGEPITGSMSPRMQNTAFA 272
Query: 262 HTRFNGIYVPMLVDDVKEFFRTYSGTDFAGFSVGIPHKE---PAVACCDEVHPLAKSIGA 318
+ +Y+P+ D KE + G S+ +P KE P +A D + GA
Sbjct: 273 DAGMDAVYLPLETSDPKELLEVAERLNIRGLSITMPLKELVMPLLAFRDRS---VEQAGA 329
Query: 319 VNTIIRRPIDGKLVGYNTDCESAISAIEDALRERQGINGVASHTSPIAGKIFVLVGAGGA 378
NT++R DGKL G+NTD I+ I + L R + G ++ VL G A
Sbjct: 330 CNTLLRHR-DGKLAGFNTD----IAGIVEPLARRITLKG---------ARVLVLGAGGAA 375
Query: 379 GRALAFGAKSRGARVIIFNRNYERAKALADAVSGEALHFEYLHEFFPEKGMILANASAIG 438
A+ +G RGA V + NR ERA+ LA E L E + + + N++ G
Sbjct: 376 RAAV-YGLVERGATVFLLNRTTERAEMLAAESGARVQARETLAETYFDA---ILNSTPYG 431
Query: 439 MEPNSDQSPVPKEALKAYELVFDAVYTPRNTRLLREAAEVGATVVSGVEMFIRQALGQFR 498
M + +P+ + + + FD VY P T L+ A GA ++ GV MF+ Q QF
Sbjct: 432 MRGQTMDAPITQAEMNC-RVFFDLVYNPLETPLIVAARARGAEIIPGVAMFVEQGARQFS 490
Query: 499 LFTGGLAPEDFMRKLVLE 516
L+T APE M ++V E
Sbjct: 491 LWTERAAPEGEMLRVVRE 508
>gi|73668461|ref|YP_304476.1| shikimate dehydrogenase [Methanosarcina barkeri str. Fusaro]
gi|121718714|sp|Q46DZ6.1|AROE_METBF RecName: Full=Shikimate dehydrogenase
gi|72395623|gb|AAZ69896.1| shikimate dehydrogenase [Methanosarcina barkeri str. Fusaro]
Length = 280
Score = 150 bits (379), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 101/290 (34%), Positives = 143/290 (49%), Gaps = 23/290 (7%)
Query: 238 KIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLV--DDVKEFFRTYSGTDFAGFSVG 295
++FG+ +P+ HS P +HN AF + IY V + +++ F G ++
Sbjct: 3 QVFGVFGDPIAHSLSPAMHNAAFSALGMDCIYHAFRVKPEKLEKAILGAEAMGFGGLNLT 62
Query: 296 IPHKEPAVAC-CDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALRERQG 354
+P KE A+ C + PLA+ IGAVNTI+ G++ GYNTD A A++++ E +G
Sbjct: 63 VPLKETALKLDCIKPDPLAEKIGAVNTIVFGET-GEIKGYNTDGLGAKQALQNSAVEMEG 121
Query: 355 INGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGARVIIFNRNYERAKALADAVSGEA 414
V+ GAGGA R++AF + GA + I NR RA LA +S +
Sbjct: 122 SK-------------IVVTGAGGAARSIAFQLAADGAEITIVNRTEGRAIELAKDISAAS 168
Query: 415 LHFEYLHEFFP------EKGMILANASAIGMEPNSDQSPVPKEALKAYELVFDAVYTPRN 468
L + + IL N + +GM PN D + E L VFD VY P
Sbjct: 169 LSGNVTGKGLSGLKNLLQDANILINTTTLGMHPNVDTAIATAEDLHPDLTVFDIVYNPLE 228
Query: 469 TRLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRKLVLEQF 518
TRLLREA GA VSGV M + Q F+L+TG P + M+K VLE
Sbjct: 229 TRLLREAKASGAKTVSGVLMLVYQGAEAFKLWTGIEPPVELMKKTVLEAL 278
>gi|332708016|ref|ZP_08428014.1| shikimate dehydrogenase [Moorea producens 3L]
gi|332353241|gb|EGJ32783.1| shikimate dehydrogenase [Moorea producens 3L]
Length = 291
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 93/300 (31%), Positives = 149/300 (49%), Gaps = 29/300 (9%)
Query: 232 HINPDTKIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLVD--DVKEFFRTYSGTDF 289
I TK+ G++ +PV HS P++HN A + +Y+P+ V D+K +
Sbjct: 3 QITGTTKLLGVIGDPVEHSLSPLMHNQAIASLGVDYVYLPLPVKSADLKNAIAGFEAIGL 62
Query: 290 AGFSVGIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDAL 349
GFS+ IPHK+ + E+ +A+ +GAVNT+ R D +G NTD E I+ +
Sbjct: 63 VGFSITIPHKQTIIPLLSEISTVAQGVGAVNTVYRN--DHGWIGTNTDIEGFITPL---- 116
Query: 350 RERQGINGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGARVI-IFNRNYERAKALAD 408
QG + + T+ V++G GGA RA+ G G I + RN ++ +
Sbjct: 117 ---QGYDRDWTQTT------VVILGCGGAARAVVVGCAELGCTEIHVVGRNQDKLGQFKE 167
Query: 409 -------AVSGEALHFEYLHEFFPEKGMILANASAIGMEPNSDQSPVPKEA---LKAYEL 458
A++ +E L E + + L NA+ +GM PN +QSPV + A L +
Sbjct: 168 SWINSDLAITIHTHAWEQLPELIGQANL-LVNATPVGMYPNIEQSPVDQLAMARLPENAI 226
Query: 459 VFDAVYTPRNTRLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRKLVLEQF 518
+D +YTP T+ LR+A E GA + G+EM ++Q F+++ G P D MR + E+
Sbjct: 227 AYDLIYTPNPTQFLRQAKERGAIAIDGLEMLVQQGAAAFKIWLGQTPPVDIMRHALQEKL 286
>gi|255542476|ref|XP_002512301.1| shikimate dehydrogenase, putative [Ricinus communis]
gi|223548262|gb|EEF49753.1| shikimate dehydrogenase, putative [Ricinus communis]
Length = 146
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 70/126 (55%), Positives = 93/126 (73%)
Query: 389 RGARVIIFNRNYERAKALADAVSGEALHFEYLHEFFPEKGMILANASAIGMEPNSDQSPV 448
+GARV++ NR++++AK LA V G+A+ L +F PE+GMILAN +++GM+P D +P+
Sbjct: 17 KGARVVVANRSFDKAKELASKVGGQAMTLAELKDFHPEEGMILANTTSVGMKPRIDDTPL 76
Query: 449 PKEALKAYELVFDAVYTPRNTRLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPED 508
PKEALK Y LVFDA+YTP+ TRLLREA E GAT V G EMFI QA QF FTG AP+
Sbjct: 77 PKEALKHYSLVFDAIYTPKLTRLLREAQECGATTVYGTEMFINQAFVQFERFTGLPAPKQ 136
Query: 509 FMRKLV 514
+R ++
Sbjct: 137 LIRDVL 142
>gi|251798006|ref|YP_003012737.1| shikimate 5-dehydrogenase [Paenibacillus sp. JDR-2]
gi|247545632|gb|ACT02651.1| shikimate 5-dehydrogenase [Paenibacillus sp. JDR-2]
Length = 293
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 98/306 (32%), Positives = 154/306 (50%), Gaps = 22/306 (7%)
Query: 220 TLVSLKQVYQLEHINPDTKIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLV--DDV 277
T+ +L I+ T ++G++ +PV HSK PI+ N AFR T NG Y+ + D +
Sbjct: 2 TVSALDNGITGNRIDSQTVLYGVIGDPVRHSKSPIMMNRAFRETGINGAYMAFHISPDKL 61
Query: 278 KEFFRTYSGTDFAGFSVGIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTD 337
EF G +V IPHK + DE+ A++IGAVNTI+ +G+L GYNTD
Sbjct: 62 GEFVAGIRAMGIRGVNVTIPHKLDIMKYMDEIDAGAQAIGAVNTIVND--NGRLTGYNTD 119
Query: 338 CESAISAIEDALRERQGINGVASHTSPIAGKIFVLVGAGGAGRALAFG-AKSRGARVIIF 396
+ ++++ +AGK +++GAGGA R + + A + + + I
Sbjct: 120 GIGYVRSLKEEAEPE------------LAGKRILVIGAGGASRGIVYALAGEQPSGITIA 167
Query: 397 NRNYERAKALADAVSG----EALHFEYLHEFFPEKGMILANASAIGMEPNSDQSPVPKEA 452
NR+ ERA+ LA + A+ + L E +++ N +++GM PN+D +P+
Sbjct: 168 NRSVERAEELAQSFRSLADIRAIANDGLQAACKEADIVI-NTTSVGMHPNTDATPIDAAW 226
Query: 453 LKAYELVFDAVYTPRNTRLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRK 512
LK + D +Y P T+ L +A G V G+ MFI Q F +TG AP MR+
Sbjct: 227 LKPGAVASDLIYNPLRTKFLLDAERHGCRVHGGLGMFIYQGAYAFEYWTGQQAPAAAMRE 286
Query: 513 LVLEQF 518
VL+
Sbjct: 287 TVLQSL 292
>gi|433444334|ref|ZP_20409253.1| shikimate dehydrogenase [Anoxybacillus flavithermus TNO-09.006]
gi|432001626|gb|ELK22499.1| shikimate dehydrogenase [Anoxybacillus flavithermus TNO-09.006]
Length = 276
Score = 149 bits (376), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 97/284 (34%), Positives = 143/284 (50%), Gaps = 18/284 (6%)
Query: 238 KIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLVDD--VKEFFRTYSGTDFAGFSVG 295
K+FGL+ PV HS P++HN AF+ + Y V+ +KE + AGF+V
Sbjct: 3 KLFGLIGCPVHHSLSPLMHNDAFQSLHIDAHYHAFHVEPHMLKEAVQGLKALQCAGFNVT 62
Query: 296 IPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALRERQGI 355
IPHK + DE+ AK +GAVNT++ +GK VGYNTD E + A L E+ I
Sbjct: 63 IPHKTAVMEYMDELDETAKQMGAVNTVVNE--NGKWVGYNTDGEGFVRA----LCEQMNI 116
Query: 356 NGVASHTSPIAGKIFVLVGAGGAGRALAFGA-KSRGARVIIFNRNYERAKALADAVSGEA 414
++G +++GAGGA R + F K A + + NR E+A+A
Sbjct: 117 E--------LSGARILIIGAGGAARGIYFTLLKHEAAAIDVCNRTMEKAEAFIQKERSAV 168
Query: 415 LHFEYLHEFFPEKGMILANASAIGMEPNSDQSPVPKEALKAYELVFDAVYTPRNTRLLRE 474
E E +I+ N +++GM P+ D P+ + LK +V D +Y P T+ L+E
Sbjct: 169 YSLEQAEERLGAYDIII-NTTSVGMYPHVDTMPISLQTLKTGTIVSDIIYNPLMTKFLQE 227
Query: 475 AAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRKLVLEQF 518
A E GA V +GV MF+ Q F +TG M +LV++Q
Sbjct: 228 AKEKGARVQNGVGMFVYQGALAFEKWTGIFPNTKRMEQLVIQQL 271
>gi|393233433|gb|EJD41005.1| Pentafunctional AroM protein [Auricularia delicata TFB-10046 SS5]
Length = 1557
Score = 148 bits (373), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 145/509 (28%), Positives = 234/509 (45%), Gaps = 56/509 (11%)
Query: 34 GADLVELCID---SMEFSHISEVDKLIQHPT-LPAIVSYRLKSSRKSSDEACKNTCLQVL 89
GAD VEL +D S + +++ E L++ T LP + + R K+ + + L ++
Sbjct: 1075 GADAVELRVDLLASTDHAYVREQVALLRGATSLPIVYTVRTKAQGGAFPDEKTKEALDLI 1134
Query: 90 RRALDLDVEF--VEMDYEVASDPLMSEIIYSRSNTKIIVSSYLNGGGKPTTEKLGDVIA- 146
L E+ VE+ VA + ++ ++ +K+I +S+ + GK + DV A
Sbjct: 1135 ELGRRLACEYLDVELSLPVAG---VDTLVKNKGKSKVI-ASWHDWSGKMRWDG-PDVKAK 1189
Query: 147 -CMQATGADVMKLEIAVDSITDLAPVFEMLTHC----QVPLIALAVGSRGLISQLLGPKF 201
+ A D++K+ A +SI D + + + P++A+ +G+ G +S++L P
Sbjct: 1190 YALAAAFGDIVKIVGAANSIQDNFALRRFVDSVSGPGRPPVLAINMGAAGQMSRILNPVL 1249
Query: 202 GGFLVYGSLGGKSVPGLPTLVSLKQVYQLEHINPDTKIFGLVSNPVGHSKGPILHNPAFR 261
+ + L ++ PG ++ ++Q L + P + F L P+ S P LHN F+
Sbjct: 1250 SP-VTHPLLPTRAAPGQLSVAQIQQALHLLGLLPARQFF-LFGTPISKSMSPTLHNTGFK 1307
Query: 262 HTRFNGIYVPMLVDDVKEFFRT-YSGTDFAGFSVGIPHKEPAVACCDEVHPLAKSIGAVN 320
Y + +V E R F G SV IPHK + D V P A++IGAVN
Sbjct: 1308 ELGLPHTYGLLETAEVDETIRAALKDNAFGGASVTIPHKLAIIPLLDAVSPHAQAIGAVN 1367
Query: 321 TIIRRPIDGKLVGYNTDCESAISAIEDALRERQGINGVASHTSPIAGKIFVLVGAGGAGR 380
T+IR+ DG L G NTD ++ + T P ++GAGG R
Sbjct: 1368 TVIRQ-ADGSLYGDNTDWRGIVACV---------------GTPPQGEWTGCVLGAGGTAR 1411
Query: 381 ALAFGAKSRGA-RVIIFNRNYERAKALADAVSGEALHFEYLHEFFPE-KGMILANASAIG 438
A + K+ GA RV + NR A +LA A+ G +H + + +I++ A G
Sbjct: 1412 AAVYALKALGASRVWVVNRTRANADSLAAAL-GPGVHAANVADLASAPPAVIVSTVPAAG 1470
Query: 439 MEPNSDQSPVPKEALKAYEL--------VFDAVYTPRNTRLLREA-AEVGATVVSGVEMF 489
E + LKA EL V D Y P T LL+ A A+ G VV G+E+
Sbjct: 1471 TESAA--------WLKARELFARAEGGVVVDMAYAPLETPLLKLAKAQAGWRVVPGIEVL 1522
Query: 490 IRQALGQFRLFTGGLAPEDFMRKLVLEQF 518
+ Q QF L+TG AP+ +R+ VL +
Sbjct: 1523 LEQGYCQFELWTGRRAPKGVVRETVLNAY 1551
>gi|167037479|ref|YP_001665057.1| shikimate 5-dehydrogenase [Thermoanaerobacter pseudethanolicus ATCC
33223]
gi|320115893|ref|YP_004186052.1| shikimate 5-dehydrogenase [Thermoanaerobacter brockii subsp. finnii
Ako-1]
gi|166856313|gb|ABY94721.1| shikimate 5-dehydrogenase [Thermoanaerobacter pseudethanolicus ATCC
33223]
gi|319928984|gb|ADV79669.1| shikimate 5-dehydrogenase [Thermoanaerobacter brockii subsp. finnii
Ako-1]
Length = 284
Score = 148 bits (373), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 93/292 (31%), Positives = 156/292 (53%), Gaps = 24/292 (8%)
Query: 233 INPDTKIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYV--PMLVDDVKEFFRTYSGTDFA 290
IN +TK++GL+ +PV HS P++HN AF+ N +Y +L + +++
Sbjct: 3 INSNTKLYGLIGHPVEHSLSPLIHNYAFKSLNLNCVYTVFDVLPEKLEDAVNGVKSLGIK 62
Query: 291 GFSVGIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALR 350
G +V +PHKE + D V A IGAVNT++ +G L GYNTD I ++ + +
Sbjct: 63 GVNVTVPHKEKIIKYLDVVSEEALKIGAVNTVVNE--EGILKGYNTDVYGFIDSLTEVGK 120
Query: 351 ERQGINGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGA-RVIIFNRNYERAKALADA 409
+ I G+ V++GAGGA +A+ +G +II NR+ ERAK L++
Sbjct: 121 K-------------IEGRKAVVLGAGGASKAVCVALALKGIDSIIIANRSVERAKDLSEY 167
Query: 410 VSGE-ALHFEY--LHEF--FPEKGMILANASAIGMEPNSDQSPVPKEALKAYELVFDAVY 464
+ E + +Y ++E PE IL N +++GM PN++ SP ++ + + V+D +Y
Sbjct: 168 IKKEFKIQCDYCSINEVKELPEID-ILVNTTSVGMYPNTEDSPADEKVVLKAKFVYDLIY 226
Query: 465 TPRNTRLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRKLVLE 516
P T LL+ A + G +G+ M + QA F+L+TGG ++ + + + E
Sbjct: 227 NPFETALLKHAKKNGIKYSNGLSMLVNQANYSFKLWTGGFFDKNLVYRYLKE 278
>gi|301057611|ref|ZP_07198691.1| shikimate dehydrogenase [delta proteobacterium NaphS2]
gi|300448335|gb|EFK12020.1| shikimate dehydrogenase [delta proteobacterium NaphS2]
Length = 272
Score = 148 bits (373), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 102/277 (36%), Positives = 141/277 (50%), Gaps = 19/277 (6%)
Query: 238 KIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLVDDVKEFFRTYSGTDFAGFSVGIP 297
KI+G++ NPVGHS P +HN AF Y D+K R +G S+ IP
Sbjct: 7 KIYGVLGNPVGHSLSPAMHNAAFEALDIPSFYGAFKTTDLKGCIRGMRALGISGMSITIP 66
Query: 298 HKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALRERQGING 357
K +A D + PLA+ IGAVNTI+ +G L GYNTD A+ A+E +
Sbjct: 67 FKTDVMAYLDALDPLAEQIGAVNTIVNE--NGLLRGYNTDGAGAMKALEAVV-------- 116
Query: 358 VASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGARVIIFNRNYERAKALADAVSGEALHF 417
P+ GK VLVGAGGA R + F A G ++ + NR+ R + LAD + F
Sbjct: 117 -----DPV-GKRCVLVGAGGAARGIGFMAVKNGMKLTVSNRSENRGRTLADFLE---CPF 167
Query: 418 EYLHEFFPEKGMILANASAIGMEPNSDQSPVPKEALKAYELVFDAVYTPRNTRLLREAAE 477
L E +L + +GM P + SPV + + +V DAVY P T++L++A
Sbjct: 168 VPLSEIKSLDTDVLIQTTPVGMFPRENASPVSADMFREGMVVMDAVYNPMETKMLKDARS 227
Query: 478 VGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRKLV 514
G + G+EMFI Q QF+L+TG AP MR +V
Sbjct: 228 RGCETIGGLEMFIHQGALQFQLWTGLEAPLKVMRAVV 264
>gi|428308139|ref|YP_007144964.1| shikimate dehydrogenase [Crinalium epipsammum PCC 9333]
gi|428249674|gb|AFZ15454.1| shikimate dehydrogenase [Crinalium epipsammum PCC 9333]
Length = 291
Score = 148 bits (373), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 86/288 (29%), Positives = 143/288 (49%), Gaps = 27/288 (9%)
Query: 237 TKIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLV--DDVKEFFRTYSGTDFAGFSV 294
TK+ G++ +P+ HS P++HN A H + +Y+P + +D++ ++ D GFSV
Sbjct: 8 TKLLGVIGSPIEHSLSPVMHNAAITHLGLDYVYLPFPIKPEDLEIAIAGFAAIDLVGFSV 67
Query: 295 GIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALRERQG 354
IPHK+ + E+ P+A+++GAVNT+ R G NTD E I+ + D R Q
Sbjct: 68 TIPHKQAIMPLLSEISPVAQAVGAVNTVWRN--HNGWSGTNTDVEGFIAPLRDHNRNWQ- 124
Query: 355 INGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRG-ARVIIFNRNYERAKALADAVSGE 413
+ V++G GGA RA+ G G ++V + RN ++ D+ +
Sbjct: 125 ------------ESVAVILGNGGASRAVVAGCAQLGFSKVQVVGRNQDKLNQFLDSFTNS 172
Query: 414 ALHFEY-LHEF--FPE---KGMILANASAIGMEPNSDQSPVPKE---ALKAYELVFDAVY 464
L +H++ P + +L N + IGM P+ + SPV E L + +D +Y
Sbjct: 173 PLDVNLSVHQWEELPNLISQANLLVNTTPIGMHPHVNDSPVDAELMAKLPTDAIAYDIIY 232
Query: 465 TPRNTRLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRK 512
TP+ T+ L+ A GA + G+EM I Q +++ P D MR+
Sbjct: 233 TPKPTQFLKAAQNFGAITIDGLEMLIYQGAAALKIWLNQPIPVDIMRQ 280
>gi|157693067|ref|YP_001487529.1| shikimate 5-dehydrogenase [Bacillus pumilus SAFR-032]
gi|157681825|gb|ABV62969.1| shikimate dehydrogenase [Bacillus pumilus SAFR-032]
Length = 280
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 96/287 (33%), Positives = 150/287 (52%), Gaps = 22/287 (7%)
Query: 239 IFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLV--DDVKEFFRTYSGTDFAGFSVGI 296
++G++ NPVGHS P +HN A + +G Y V DD+K+ +GF+V +
Sbjct: 4 LYGVIGNPVGHSMSPDIHNAALKDAGIDGHYHGFQVENDDLKDAINGMKALGISGFNVTV 63
Query: 297 PHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALRERQGIN 356
PHK + D++ A+ + AVNT+ R +G+LVGYNTD E + ++ +AL +
Sbjct: 64 PHKVDIMQYLDKIDVTAERLRAVNTV--RLEEGQLVGYNTDGEGFLHSLLEALDQ----- 116
Query: 357 GVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGARVI-IFNRNYERAKALADAVSGE-- 413
P+ F+L+GAGGA RA+ + I NR E+A+AL + G
Sbjct: 117 -------PLTELSFLLIGAGGAARAIYTTIADYAPKSFDITNRTIEKAEALIKSADGNIT 169
Query: 414 --ALHFEYLHEFFPEKGMILANASAIGMEPNSDQSPVPKEALKAYELVFDAVYTPRNTRL 471
A+ + E E +I+ + ++IGM PN +++P+ K +V D VY P T+L
Sbjct: 170 SSAITLKTAEEQLGEYDVII-HTTSIGMHPNVEETPISLANAKKTAVVCDIVYNPIETKL 228
Query: 472 LREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRKLVLEQF 518
LREAA +G V GV MF+ QA F L+TG M+ +V+++
Sbjct: 229 LREAAGLGLKTVDGVGMFVGQAARAFELWTGITPDVRKMKSIVIQKL 275
>gi|239827796|ref|YP_002950420.1| shikimate 5-dehydrogenase [Geobacillus sp. WCH70]
gi|259585283|sp|C5D4W2.1|AROE_GEOSW RecName: Full=Shikimate dehydrogenase
gi|239808089|gb|ACS25154.1| shikimate 5-dehydrogenase [Geobacillus sp. WCH70]
Length = 277
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 97/287 (33%), Positives = 143/287 (49%), Gaps = 20/287 (6%)
Query: 238 KIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLVD--DVKEFFRTYSGTDFAGFSVG 295
K++ L PV HS PI+HN AF++ Y V+ +K+ +G +V
Sbjct: 3 KLYALFGCPVHHSLSPIMHNDAFQNMNIAAHYHAFHVEPERLKDAIAGVRALGISGVNVT 62
Query: 296 IPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALRERQGI 355
IPHK + DEV P A+ IGAVNTI+ R +G+L+GYNTD + A+E+ +
Sbjct: 63 IPHKTAVMPLLDEVDPTARRIGAVNTIVNR--NGRLIGYNTDGPGYVRALEEEI------ 114
Query: 356 NGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGARVI-IFNRNYERAKALADAVSGEA 414
I K +L+GAGGA R + RGA+ I I NR +AK L D +
Sbjct: 115 ------NVDIKEKRILLIGAGGAARGIYVSLADRGAKQIDICNRTVSKAKQLIDECNASV 168
Query: 415 LHFEY-LHEFFPEKGM--ILANASAIGMEPNSDQSPVPKEALKAYELVFDAVYTPRNTRL 471
Y L+E G IL N +++GM PN ++ P+ +K +V D +Y P T+
Sbjct: 169 SSVVYSLNEAEERLGEYDILINTTSVGMYPNMEEMPLSLANMKEETIVSDIIYNPLETKW 228
Query: 472 LREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRKLVLEQF 518
L+EA + + +GV MF+ Q F +TG M+K+V+EQ
Sbjct: 229 LKEARKRNGIIQNGVGMFVYQGALAFEKWTGIFPDVQRMKKIVIEQL 275
>gi|220928114|ref|YP_002505023.1| shikimate 5-dehydrogenase [Clostridium cellulolyticum H10]
gi|219998442|gb|ACL75043.1| shikimate 5-dehydrogenase [Clostridium cellulolyticum H10]
Length = 294
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 86/286 (30%), Positives = 143/286 (50%), Gaps = 29/286 (10%)
Query: 230 LEHINPDTKIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLVD--DVKEFFRTYSGT 287
+E +N T+++G++ NPV H+K P +HN F+ N IY+P+ VD +++ +
Sbjct: 4 IEVVNGKTQLYGVLGNPVQHTKSPFIHNTLFKEFEINAIYLPIHVDKGKLEQVMDGFRAI 63
Query: 288 DFAGFSVGIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIED 347
F+GF+V +P K+ + DEV K +GA+NT+I + DG+ +GYNTD E + D
Sbjct: 64 KFSGFNVTVPFKKDIINHLDEVSAEGKLMGAINTVINK--DGRFIGYNTDAEGFVRDFSD 121
Query: 348 ALRERQGINGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRG-ARVIIFNRNYERAKAL 406
+ GK +L+GAGG RA+A S G + I NR A+++
Sbjct: 122 GFE------------TTFKGKRVMLLGAGGTSRAIAVRLASEGIEHLTIVNRTEANAQSI 169
Query: 407 ADAVSGEALHFEYLHEFFPEKGM---------ILANASAIGMEPNSDQSPVPKE-ALKAY 456
++ V+ + + PEK + I+ N + GM D +P +
Sbjct: 170 SNLVNSN--FGDIVSTILPEKEILDRELENNHIIVNTTPAGMSTYLDSTPFDLDFNFNGT 227
Query: 457 ELVFDAVYTPRNTRLLREAAEVGATVVSGVEMFIRQALGQFRLFTG 502
+LV+D +Y P+ TR L +A + G + +G M I Q + F ++TG
Sbjct: 228 QLVYDVLYVPKKTRFLEQAEKTGCKIRNGFGMLINQGVSAFEIWTG 273
>gi|46446516|ref|YP_007881.1| 3-phosphoshikimate
1-carboxyvinyltransferase(5-enolpyruvylshikimate-3-
phosphat e synthase, EPSP synthase) [Candidatus
Protochlamydia amoebophila UWE25]
gi|46400157|emb|CAF23606.1| putative 3-phosphoshikimate
1-carboxyvinyltransferase(5-enolpyruvylshikimate-3-
phosphate synthase, EPSP synthase) [Candidatus
Protochlamydia amoebophila UWE25]
Length = 939
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 137/521 (26%), Positives = 232/521 (44%), Gaps = 48/521 (9%)
Query: 7 NSLLVCTQLECETTEEMQASIEQAKVEGADLVELCIDSMEFSHISEVDKLIQHPTLPAIV 66
+S +C L T + I+Q + DL+E+ +D + +E+D+L + P I
Sbjct: 16 HSCQLCVSLIDLTCDAFIYQIQQLPSQ-VDLIEIRLDKLLKIDFAELDRLKEIAHRPLIW 74
Query: 67 SYRLKSSRKSSDEACKNTCLQVLRRALDLDVEFVEMDYEVASDPLMSEIIYSRSNTKIIV 126
+ R KS + + L + + +FV+++ ++ + L E+ T+ I+
Sbjct: 75 TLRKKSQGGNFLGNIQKQFL-IFKELAKRQPDFVDIEADIPLEWL-QELQKISPQTQWII 132
Query: 127 SSYLNGGGKPTTEKLGDVIACMQATGADVMKLEIAVDSITDLAPVFEMLT----HCQVPL 182
S + T L + + A + KL SI D + EM H + L
Sbjct: 133 SWH----EVKETPHLKTCLDQLYALPGNYYKLACYTHSIIDSLKLLEMAQQENKHSR-RL 187
Query: 183 IALAVGSRGLISQLLGPKFGGFLVYGSL--GGKSVPGLPTLVSLKQVYQLEHINPDTKIF 240
+ +G +G +++L P G + SL G +S PG + +L Q Y+ + ++ T+IF
Sbjct: 188 CTIGLGMKGQCTRILAPVTGQPFTFASLKEGLESAPGQISFQTLFQTYRFKKLSQQTEIF 247
Query: 241 GLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLVDD--VKEFFRTYSGTDFAGFSVGIPH 298
GL+ +P+ S + HN H N +Y+ V++ ++ FF+ GFSV +PH
Sbjct: 248 GLIGHPIDKSLSHLTHNAVLDHLNQNAVYIKFDVEETELELFFQHIQRFSVRGFSVTMPH 307
Query: 299 KEP-----AVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALRERQ 353
KE A+ DE H ++ ++II G NTD A+ A++
Sbjct: 308 KERVKKILALNMDDESHLACNTLLFSSSIIN--------GTNTDGIGALKALK------- 352
Query: 354 GINGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGARVIIFNRNYERAKALADAVSGE 413
+ K +L+GAGG +A+A+ AK RGA V I NR RAK +A+ + +
Sbjct: 353 --------VEDLKDKKLILLGAGGTSQAIAYEAKKRGAEVTILNRTVLRAKDVAEKIQVK 404
Query: 414 ALHFEYLHEFFPEKGMILANASAIGMEPNSDQSPVPKEALKAYELVFDAVYTPRNTRLLR 473
FE L E + IL +++GM P+ D V + + D + P T L+
Sbjct: 405 WGGFEQLKEAKKNECDILIQTTSVGMSPHVDALVVSADWIPQQITALDVISHPFETLFLQ 464
Query: 474 EAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRKLV 514
+A G + G+E+FI QA QF G + F +KL+
Sbjct: 465 KARLKGCEIHHGIELFIHQAAFQF----GFWFNKQFDQKLI 501
>gi|167040141|ref|YP_001663126.1| shikimate 5-dehydrogenase [Thermoanaerobacter sp. X514]
gi|307724540|ref|YP_003904291.1| shikimate 5-dehydrogenase [Thermoanaerobacter sp. X513]
gi|166854381|gb|ABY92790.1| shikimate 5-dehydrogenase [Thermoanaerobacter sp. X514]
gi|307581601|gb|ADN55000.1| shikimate 5-dehydrogenase [Thermoanaerobacter sp. X513]
Length = 284
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 96/292 (32%), Positives = 155/292 (53%), Gaps = 24/292 (8%)
Query: 233 INPDTKIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYV--PMLVDDVKEFFRTYSGTDFA 290
IN +TK++GL+ +PV HS P++HN AF+ N +Y +L + +++
Sbjct: 3 INSNTKLYGLIGHPVEHSLSPLIHNYAFKSLNLNCVYTVFDVLPEKLEDAVNGVKALGIK 62
Query: 291 GFSVGIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALR 350
G +V +PHKE + D V A IGAVNT++ +G L GYNTD I D+L
Sbjct: 63 GVNVTVPHKEKIIKYLDVVSEEALKIGAVNTVVNE--EGILKGYNTDVYGFI----DSLT 116
Query: 351 ERQGINGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGA-RVIIFNRNYERAKALADA 409
E I G+ V++GAGGA +A+ +G +II NR+ ERAK L++
Sbjct: 117 EVG---------EKIEGRKAVVLGAGGASKAVCVALALKGIDSIIIANRSVERAKDLSEY 167
Query: 410 VSGE-ALHFEY--LHEF--FPEKGMILANASAIGMEPNSDQSPVPKEALKAYELVFDAVY 464
+ E + +Y ++E PE IL N +++GM PN++ SP ++ + + V+D +Y
Sbjct: 168 IKKEFKIQCDYCSINEVKELPEID-ILVNTTSVGMYPNTEDSPADEKVVLKAKFVYDLIY 226
Query: 465 TPRNTRLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRKLVLE 516
P T LL+ A + G +G+ M + QA F+L+TGG ++ + + + E
Sbjct: 227 NPFETALLKHAKKNGIKYSNGLSMLVNQANYSFKLWTGGFFDKNLVYRYLKE 278
>gi|300914225|ref|ZP_07131541.1| shikimate 5-dehydrogenase [Thermoanaerobacter sp. X561]
gi|300889160|gb|EFK84306.1| shikimate 5-dehydrogenase [Thermoanaerobacter sp. X561]
Length = 292
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 96/301 (31%), Positives = 159/301 (52%), Gaps = 25/301 (8%)
Query: 224 LKQVYQLEHINPDTKIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYV--PMLVDDVKEFF 281
LK + +E IN +TK++GL+ +PV HS P++HN AF+ N +Y +L + +++
Sbjct: 3 LKGLRDME-INSNTKLYGLIGHPVEHSLSPLIHNYAFKSLNLNCVYTVFDVLPEKLEDAV 61
Query: 282 RTYSGTDFAGFSVGIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESA 341
G +V +PHKE + D V A IGAVNT++ +G L GYNTD
Sbjct: 62 NGVKALGIKGVNVTVPHKEKIIKYLDVVSEEALKIGAVNTVVNE--EGILKGYNTDVYGF 119
Query: 342 ISAIEDALRERQGINGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGA-RVIIFNRNY 400
I ++ + I G+ V++GAGGA +A+ +G +II NR+
Sbjct: 120 IDSLTEV-------------GEKIEGRKAVVLGAGGASKAVCVALALKGIDSIIIANRSV 166
Query: 401 ERAKALADAVSGE-ALHFEY--LHEF--FPEKGMILANASAIGMEPNSDQSPVPKEALKA 455
ERAK L++ + E + +Y ++E PE IL N +++GM PN++ SP ++ +
Sbjct: 167 ERAKDLSEYIKKEFKIQCDYCSINEVKELPEID-ILVNTTSVGMYPNTEDSPADEKVVLK 225
Query: 456 YELVFDAVYTPRNTRLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRKLVL 515
+ V+D +Y P T LL+ A + G +G+ M + QA F+L+TGG ++ + + +
Sbjct: 226 AKFVYDLIYNPFETALLKHAKKNGIKYSNGLSMLVNQANYSFKLWTGGFFDKNLVYRYLK 285
Query: 516 E 516
E
Sbjct: 286 E 286
>gi|222445470|ref|ZP_03607985.1| hypothetical protein METSMIALI_01109 [Methanobrevibacter smithii
DSM 2375]
gi|222435035|gb|EEE42200.1| shikimate dehydrogenase [Methanobrevibacter smithii DSM 2375]
Length = 281
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 102/290 (35%), Positives = 148/290 (51%), Gaps = 28/290 (9%)
Query: 233 INPDTKIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLV--DDVKEFFRTYSGTDFA 290
IN TKI GL+ +PV HS P +HN AF + YVP V +++K +
Sbjct: 2 INGSTKIVGLIGHPVEHSFSPPMHNAAFEELGLDYAYVPFNVCPENLKSAILGAKSLNIK 61
Query: 291 GFSVGIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALR 350
GF+V IPHK + D++ P+AK IGAVNTI + ++ GYNTD I AI
Sbjct: 62 GFNVTIPHKINVMKYLDKLDPIAKLIGAVNTIDFK----EMKGYNTDGIGCIKAI----- 112
Query: 351 ERQGINGVASHTSPIAGKIFVLVGAGGAGRALAFG-AKSRGARVIIFNRNYERAKALADA 409
+ I K V+ GAGGA RA++F A+ + I NR+ +AK+LA+
Sbjct: 113 ---------GEVTSIKDKNIVVAGAGGASRAISFYLARENPQSIHILNRDINKAKSLAED 163
Query: 410 VSGEAL----HFEYLHEF--FPEKGMILANASAIGMEPN-SDQSPVPKEALKAYELVFDA 462
V L F+ + + + IL + + +GM P+ +D++ V E + + +V D
Sbjct: 164 VKNSKLTDNVDFDSIDKIVGYVSDADILIDTTPVGMSPHVNDEAIVKAEDMHSDLVVNDI 223
Query: 463 VYTPRNTRLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRK 512
VY P T LL EA + GAT V G++M + Q F ++TG AP D M K
Sbjct: 224 VYNPNETVLLSEAIKAGATPVYGIKMLLYQGAESFEIWTGEKAPVDVMEK 273
>gi|256752529|ref|ZP_05493385.1| shikimate 5-dehydrogenase [Thermoanaerobacter ethanolicus CCSD1]
gi|256748595|gb|EEU61643.1| shikimate 5-dehydrogenase [Thermoanaerobacter ethanolicus CCSD1]
Length = 292
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 96/301 (31%), Positives = 159/301 (52%), Gaps = 25/301 (8%)
Query: 224 LKQVYQLEHINPDTKIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYV--PMLVDDVKEFF 281
LK + +E IN +TK++GL+ +PV HS P++HN AF N +Y +L + ++E
Sbjct: 3 LKGLRDME-INANTKLYGLIGHPVEHSLSPLIHNYAFNSLDLNCVYTVFDVLPEKLEEAV 61
Query: 282 RTYSGTDFAGFSVGIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESA 341
+ G +V +PHKE + D + A IGAVNT++ +G L GYNTD
Sbjct: 62 KGVKALGIRGVNVTVPHKEKIIKYLDVISEEALKIGAVNTVVNE--EGILKGYNTDVYGF 119
Query: 342 ISAIEDALRERQGINGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGA-RVIIFNRNY 400
I ++ + I G+ V++GAGGA +A+ +G +II NR+
Sbjct: 120 IDSLTEV-------------GEKIEGRKAVVLGAGGASKAVCVALALKGIDSIIIANRSV 166
Query: 401 ERAKALADAVSGE-ALHFEY--LHEF--FPEKGMILANASAIGMEPNSDQSPVPKEALKA 455
ERAK L++ + E + +Y ++E PE IL N +++GM PN++ SP ++ +
Sbjct: 167 ERAKDLSEYIKKEFKIQCDYCSINEVKELPEID-ILVNTTSVGMYPNTEDSPADEKVVLK 225
Query: 456 YELVFDAVYTPRNTRLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRKLVL 515
+ V+D +Y P T LL+ A + G +G+ M + QA F+L+TGG ++ + + +
Sbjct: 226 AKFVYDLIYNPFETALLKHAKKNGIKYSNGLSMLVNQANYSFKLWTGGFFDKNLVYRYLK 285
Query: 516 E 516
E
Sbjct: 286 E 286
>gi|317128280|ref|YP_004094562.1| shikimate 5-dehydrogenase [Bacillus cellulosilyticus DSM 2522]
gi|315473228|gb|ADU29831.1| shikimate 5-dehydrogenase [Bacillus cellulosilyticus DSM 2522]
Length = 281
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 92/287 (32%), Positives = 152/287 (52%), Gaps = 20/287 (6%)
Query: 238 KIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLV--DDVKEFFRTYSGTDFAGFSVG 295
+I G++ +P+GHS P +HN A+R N Y V + ++ + G G +V
Sbjct: 3 QIIGVIGDPIGHSLSPHMHNAAYRELGINMEYHAFHVKREQLENALKGVRGLGIKGLNVT 62
Query: 296 IPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALRERQGI 355
IPHK + DEV LA+ +GAVNTI+ DGKL+G+NTD E + ++ + ++
Sbjct: 63 IPHKVNVLPYLDEVDELARHLGAVNTIVNE--DGKLIGFNTDGEGYLQSLYEFIQ----- 115
Query: 356 NGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGAR-VIIFNRNYERAKALA-DAVSGE 413
+ K +++GAGGA RA+ + G + +I+ NR E+ + L D
Sbjct: 116 -------GDLQTKRVLMIGAGGASRAVTLTIANSGVKEIIVTNRTAEKGEELVKDCKKFC 168
Query: 414 ALHFEYLHEFFP--EKGMILANASAIGMEPNSDQSPVPKEALKAYELVFDAVYTPRNTRL 471
F L E E+ ++ N ++IGM P+ ++ P+ + +K+ +V D +YTP T+
Sbjct: 169 PSSFMSLEEVEKNLERFDVVINTTSIGMAPHLNKLPISLDKVKSDTIVSDLIYTPFKTKF 228
Query: 472 LREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRKLVLEQF 518
L EA + G V++G++MF+ Q F+ +TG AP MR+ VL+Q
Sbjct: 229 LIEAEKKGCRVLNGLDMFVYQGALAFKRWTGINAPTQVMREAVLQQL 275
>gi|421873988|ref|ZP_16305597.1| shikimate 5-dehydrogenase [Brevibacillus laterosporus GI-9]
gi|372457099|emb|CCF15146.1| shikimate 5-dehydrogenase [Brevibacillus laterosporus GI-9]
Length = 277
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 106/286 (37%), Positives = 153/286 (53%), Gaps = 20/286 (6%)
Query: 239 IFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLVDD--VKEFFRTYSGTDFAGFSVGI 296
+ GL PVGHS P++HN AF + Y V+D +KE G +V I
Sbjct: 1 MVGLFGRPVGHSLSPVMHNTAFEQKQLPFAYAAFEVNDDQIKEAVEAIRALGMRGANVTI 60
Query: 297 PHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALRERQGIN 356
PHK + D++ PLA+ IGAVNTI+ DG L+GYNTD + + L E GI+
Sbjct: 61 PHKVAVIPYLDKIDPLAERIGAVNTIVNE--DGTLIGYNTDGTGYVRS----LLEETGID 114
Query: 357 GVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGARVI-IFNRNYERAKALADAVSGEA- 414
+ + L+GAGGA RA+A RG + I I NR+ ERA+ LA A+ +
Sbjct: 115 --------LTEQTVTLLGAGGAARAVACTLVERGVKEIRIVNRSLERAELLALALGSQIP 166
Query: 415 -LHFEYLH-EFFPEKGMILANASAIGMEPNSDQSPVPKEALKAYELVFDAVYTPRNTRLL 472
+ + H E + +L N ++IGM P+ + PV ++ L+ +V D +Y P T+LL
Sbjct: 167 IRVYSFAHAELAIQDSTLLINTTSIGMYPHIHEMPVDRKCLRPDLIVSDLIYNPLETQLL 226
Query: 473 REAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRKLVLEQF 518
+ A E+GAT SG+ MFI Q + L+TG AP D MR++VL+
Sbjct: 227 QCAKEIGATHHSGLGMFINQGALAYELWTGEAAPTDKMREIVLQHL 272
>gi|374299531|ref|YP_005051170.1| shikimate dehydrogenase [Desulfovibrio africanus str. Walvis Bay]
gi|332552467|gb|EGJ49511.1| Shikimate dehydrogenase [Desulfovibrio africanus str. Walvis Bay]
Length = 305
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 96/284 (33%), Positives = 149/284 (52%), Gaps = 25/284 (8%)
Query: 239 IFGLVSNPVGHSKGPILHNPAFRHTRFNGIYV--PMLVDDVKEFFRTYSGTDFAGFSVGI 296
+ G++ NP+GHS P+LHN AFR G Y+ PM + + +F G SV I
Sbjct: 39 LCGIIGNPLGHSLSPVLHNWAFREVGVAGTYMAWPMAPESLDDFMAAVLTLPIWGVSVTI 98
Query: 297 PHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALRERQGIN 356
PHK + C+E+ ++ GAVNT+ + G L G NTD + ++ + + GI
Sbjct: 99 PHKTGIMKFCEELSGRCRAAGAVNTLHWK--KGLLCGENTDVQGFLAPLAEI-----GIK 151
Query: 357 GVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGARVI-IFNRNYERAKALADAVSGEAL 415
++ +++GAGGA RA+ G + G R I + NR E A+ L + + + +
Sbjct: 152 PASA----------LILGAGGAARAVIAGLREWGVRSIHVANRTPEAARTLCNHMRCQGV 201
Query: 416 HFEYLHEFFPEKGMILANASAIGM-EPNSDQSPVPKEALKAYELVFDAVYTPRNTRLLRE 474
+E E + +L NA+ +GM D +P P E+ ++V+D +Y P +TR L E
Sbjct: 202 AWE---ERTGVQAELLVNATPLGMLGERQDATPWPVESFTRGQIVYDLIYNPIDTRFLVE 258
Query: 475 AAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRKLVLEQF 518
A + G V+ G+EMF+ QA QFRL+T P D R+LV +QF
Sbjct: 259 ARQAGCAVIPGLEMFLHQAAAQFRLWTDEELPLDGARRLV-KQF 301
>gi|240103652|ref|YP_002959961.1| shikimate 5-dehydrogenase [Thermococcus gammatolerans EJ3]
gi|239911206|gb|ACS34097.1| Shikimate 5-dehydrogenase (aroE) [Thermococcus gammatolerans EJ3]
Length = 272
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 100/287 (34%), Positives = 145/287 (50%), Gaps = 24/287 (8%)
Query: 233 INPDTKIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLV--DDVKEFFRTYSGTDFA 290
++ +T+++GL+ P HS P +HN AFR N +Y+ V + +K G
Sbjct: 1 MDAETRLYGLIGFPARHSLSPAMHNAAFRELGMNAVYLAFEVAPERLKMAVDGVRGLGIH 60
Query: 291 GFSVGIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALR 350
G +V +PHK + D + A+ IG+VNTI+ DG+L+GYNTD A A+E
Sbjct: 61 GLNVTMPHKTTVIEHLDGLSGEAEEIGSVNTIVN---DGELIGYNTDGVGARRALE---- 113
Query: 351 ERQGINGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGARVIIFNRNYERAKALAD-A 409
+ + GK VL+ G A S+ + V++ NR E+A+AL
Sbjct: 114 ----------MVTSLRGK-NVLIIGAGGAGRAIAYALSKVSEVVVLNRTPEKARALERFG 162
Query: 410 VSGEALHFEYLHEFFPEKGMILANASAIGMEPNSDQSPVPKEALKAYELVFDAVYTPRNT 469
V+G+ L E L + +L NA+ +GM NSD+SPVP E L+ +V D VY P T
Sbjct: 163 VTGDRLTPENLRRYLANAD-VLINATPVGM--NSDESPVPAELLREGLVVMDIVYKPLKT 219
Query: 470 RLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRKLVLE 516
RLLREA G V G+ M + Q FRL+TG + MR+ LE
Sbjct: 220 RLLREAERRGCVTVDGLWMLVHQGAESFRLWTGKSVDPELMRRAALE 266
>gi|428301034|ref|YP_007139340.1| shikimate dehydrogenase [Calothrix sp. PCC 6303]
gi|428237578|gb|AFZ03368.1| shikimate dehydrogenase [Calothrix sp. PCC 6303]
Length = 306
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 91/308 (29%), Positives = 150/308 (48%), Gaps = 34/308 (11%)
Query: 230 LEHINPDTKIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLVD--DVKEFFRTYSGT 287
L+ I TK+ G++ +PVGHS P++HN A + +Y+P + ++++ ++
Sbjct: 12 LKMITGTTKLLGVIGDPVGHSLSPLMHNAAINTLGLDYVYLPFPIKPHNLRDAIACFAAI 71
Query: 288 DFAGFSVGIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIED 347
GFSV IPHK+ + EV LAK +GAVNT+ + D VG NTD IS ++
Sbjct: 72 GVLGFSVTIPHKQAIIPFLSEVSDLAKVVGAVNTVFYQ--DHHWVGTNTDVTGFISPLKT 129
Query: 348 ALRERQGINGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRG-ARVIIFNRNYERAKAL 406
N S TS V++G GGA RA+ G G + + R+ E+
Sbjct: 130 TY------NRDWSQTS------VVILGNGGAARAIVVGCTELGCGEIHVVGRDVEKIALF 177
Query: 407 ADAVSGEAL-------HFEYLHEFFPEKGMILANASAIGMEPNSDQSPVPKEALKAYE-- 457
D+ L H++ L + P+ + L N + +GM P ++SP+ E K +
Sbjct: 178 RDSWQNSTLVGNLQVHHWDMLPKLLPQANL-LVNTTPVGMHPQIERSPLTIEEFKQFAVA 236
Query: 458 ------LVFDAVYTPRNTRLLREAAEVGATVVSGVEMFIRQALGQFRLFTG-GLAPEDFM 510
+ +D Y P T+ L++AA VGAT ++G+EM ++Q +++ P D M
Sbjct: 237 SSINPPIAYDLTYNPSPTKFLQQAASVGATTINGLEMLVQQGAAALKIWLQRDTVPVDVM 296
Query: 511 RKLVLEQF 518
R+ +L+
Sbjct: 297 RQTLLQHL 304
>gi|302035827|ref|YP_003796149.1| shikimate 5-dehydrogenase [Candidatus Nitrospira defluvii]
gi|300603891|emb|CBK40223.1| Shikimate 5-dehydrogenase [Candidatus Nitrospira defluvii]
Length = 284
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 99/289 (34%), Positives = 146/289 (50%), Gaps = 11/289 (3%)
Query: 233 INPDTKIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLVDDVKEFFRTYSGTDFA-G 291
I T+ G++ NPV HS P +HN AF+ + +Y+ V+ + + + A G
Sbjct: 3 ITTQTQWCGIIGNPVEHSLSPAIHNAAFQRMGLDLVYLAFRVEALGDALKGVRALGNARG 62
Query: 292 FSVGIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIED--AL 349
FSV IPHK A+ DEV P AK IGA+NTI+ +GKL GYNTD A+ A+++ AL
Sbjct: 63 FSVTIPHKVAAIPFLDEVEPTAKHIGAINTIVVE--EGKLKGYNTDASGALRALKEGGAL 120
Query: 350 RERQGINGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGARVIIFNRNYERAKALADA 409
+ + + S + A + G G AG L G R + ++A
Sbjct: 121 LDGHRVLILGSGGAARAIAFALATGTGIAG--LTILGIEEGERQKLVKDLRDKANI---P 175
Query: 410 VSGEALHFEYLHEFFPEKGMILANASAIGMEPNSDQSPVPKEALKAYELVFDAVYTPRNT 469
+ L + L + P L + + +GM P D+S VP + V D VY PR T
Sbjct: 176 IEDGPLTLDMLRNWVPHV-RTLIHCTPVGMSPRIDESCVPTNLFRPELTVMDIVYNPRET 234
Query: 470 RLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRKLVLEQF 518
+LL+EA G +SG+EMF+ QA+ QF L+T AP D MR+++ +F
Sbjct: 235 KLLQEAKAAGCRTISGLEMFLNQAVLQFELWTKQPAPADVMRRVLESRF 283
>gi|288555655|ref|YP_003427590.1| shikimate 5-dehydrogenase [Bacillus pseudofirmus OF4]
gi|288546815|gb|ADC50698.1| shikimate 5-dehydrogenase [Bacillus pseudofirmus OF4]
Length = 278
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 99/289 (34%), Positives = 145/289 (50%), Gaps = 23/289 (7%)
Query: 238 KIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLVD--DVKEFFRTYSGTDFAGFSVG 295
K FGL+ +PV HS P +HN AFR + Y + V+ D++E G +V
Sbjct: 3 KRFGLIGHPVAHSMSPQMHNDAFRACEIDADYEAIDVEAGDLEEVMEKIRIGVLDGVNVT 62
Query: 296 IPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDAL-RERQG 354
IPHK ++ DE+ A+ IGAVNTI+R +GKLVGYNTD + +IE L
Sbjct: 63 IPHKVAIMSFIDEIDREAERIGAVNTIVRN--NGKLVGYNTDGAGYMQSIEPYLPSNLHD 120
Query: 355 INGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRG-ARVIIFNRNYERAKALADAVSGE 413
IN +++GAGGA RA+ G + +++ NR E+A L + +S +
Sbjct: 121 IN-------------VLVIGAGGAARAVCASFLGAGVSSLVVANRTKEKADTLLNLISTK 167
Query: 414 ALHFEYLHEFFPEKGM----ILANASAIGMEPNSDQSPVPKEALKAYELVFDAVYTPRNT 469
+ EKG+ I+ N +++GM P ++Q P+ LK +V D +Y P T
Sbjct: 168 QDQTNAMTLSEAEKGLERFDIIVNTTSVGMSPYTEQKPISLTKLKDKAIVSDLIYNPLET 227
Query: 470 RLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRKLVLEQF 518
L+EAAE GA V+GV MF+ Q F +TG M +VL+
Sbjct: 228 AFLKEAAERGAITVNGVGMFVNQGALSFEYWTGIKPDRKRMTNIVLKTL 276
>gi|350271939|ref|YP_004883247.1| shikimate dehydrogenase [Oscillibacter valericigenes Sjm18-20]
gi|348596781|dbj|BAL00742.1| shikimate dehydrogenase [Oscillibacter valericigenes Sjm18-20]
Length = 286
Score = 145 bits (367), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 95/303 (31%), Positives = 148/303 (48%), Gaps = 35/303 (11%)
Query: 230 LEHINPDTKIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLV---DDVKEFFRTYSG 286
+ +I DTK+ GL+ P+ S L N + + Y+P+ V D +
Sbjct: 1 MHYITVDTKMIGLLGTPLRQSVSYKLQNRVYEQAGLDYFYLPIEVSTEDRLPAVVEGIRA 60
Query: 287 TDFAGFSVGIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIE 346
+FAGF++ P+KE + DE L +GA NT+ R DGKL+GYNTD + ++E
Sbjct: 61 MNFAGFAITKPYKETILKYLDERDDLVTKMGACNTVAVR--DGKLIGYNTDGIGCVRSLE 118
Query: 347 DALRERQGINGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGARVIIFNRNYERAKAL 406
++G I GK F GAGGA RA+ F RGA+ I+ + +R + L
Sbjct: 119 --------VDGGLD----IKGKTFFSFGAGGAARAVCFELACRGAKQIVISSASQRCEHL 166
Query: 407 ADAV-------------SGEALHFEYLHEFFPEKGMILANASAIGMEPNSDQSPVPKEAL 453
A+ + + E +EY+ + +L N S IGM P+ +SP+ K+
Sbjct: 167 AEDINRLFPGLCVPVRLTDEERMYEYIRQ-----ADVLLNMSGIGMAPHLGESPMKKDRF 221
Query: 454 KAYELVFDAVYTPRNTRLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRKL 513
+ ++L +DAVY P TR L++A +++G+ M I Q L Q +++TG AP M
Sbjct: 222 QPHQLCYDAVYDPEKTRFLQDAEAARCRILNGLGMVIYQGLEQIKIWTGVDAPAQIMFDA 281
Query: 514 VLE 516
V E
Sbjct: 282 VRE 284
>gi|17229549|ref|NP_486097.1| shikimate 5-dehydrogenase [Nostoc sp. PCC 7120]
gi|24211460|sp|Q8YVC1.1|AROE_ANASP RecName: Full=Shikimate dehydrogenase
gi|17131148|dbj|BAB73756.1| shikimate 5-dehydrogenase [Nostoc sp. PCC 7120]
Length = 289
Score = 145 bits (367), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 86/300 (28%), Positives = 156/300 (52%), Gaps = 29/300 (9%)
Query: 233 INPDTKIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLV--DDVKEFFRTYSGTDFA 290
I TK+ G++ +PV HS P++HN A + +Y+P + D+++ +
Sbjct: 2 ITGKTKLLGVIGHPVEHSLSPVMHNAAIAQLGLDYVYLPFPIAPDNLEAAIALLATIGVV 61
Query: 291 GFSVGIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALR 350
GFSV IPHK+ + E+ P+A++IGAVNT+ R+ + + VG NTD E I+ ++ +
Sbjct: 62 GFSVTIPHKQAIIPLLSEISPVAQAIGAVNTVTRQ--NNQWVGTNTDIEGFIAPLQTTYK 119
Query: 351 ERQGINGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRG-ARVIIFNRNYERAK----A 405
+ +I V++G GGA RA+ G G A + + RN +R + +
Sbjct: 120 RDW------------SQQIAVILGNGGAARAVVAGCYQLGFAEIHVVGRNVQRLEEFRHS 167
Query: 406 LADAVSGEALH---FEYLHEFFPEKGMILANASAIGMEPNSDQSPVPKEALKAYE---LV 459
++ E L ++YL + P+ + L N + IGM P D+SP+ E L + +
Sbjct: 168 WENSPIAENLQVHTWDYLAKLIPQANL-LVNTTPIGMYPQVDESPLSAEELVNLQTGTIA 226
Query: 460 FDAVYTPRNTRLLREAAEVGATVVSGVEMFIRQALGQFRLF-TGGLAPEDFMRKLVLEQF 518
+D +Y P+ T+ L++A + GA ++ G+EM ++Q + +++ P D MR+ +++
Sbjct: 227 YDLIYIPKPTQFLQKAQQQGAIIIDGLEMLVQQGVAALKIWLQQDDIPVDVMRQALIKHL 286
>gi|148643239|ref|YP_001273752.1| shikimate 5-dehydrogenase, AroE [Methanobrevibacter smithii ATCC
35061]
gi|166219474|sp|A5UMF6.1|AROE_METS3 RecName: Full=Shikimate dehydrogenase
gi|148552256|gb|ABQ87384.1| shikimate 5-dehydrogenase, AroE [Methanobrevibacter smithii ATCC
35061]
Length = 281
Score = 145 bits (367), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 101/290 (34%), Positives = 148/290 (51%), Gaps = 28/290 (9%)
Query: 233 INPDTKIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLV--DDVKEFFRTYSGTDFA 290
IN TKI GL+ +PV HS P +HN AF + YVP V +++K +
Sbjct: 2 INGSTKIVGLIGHPVEHSFSPPMHNAAFEELGLDYAYVPFNVCPENLKSAILGAKSLNIK 61
Query: 291 GFSVGIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALR 350
GF+V IPHK + D++ P+AK IGAVNTI + ++ GYNTD I AI
Sbjct: 62 GFNVTIPHKINVMKYLDKLDPIAKLIGAVNTIDFK----EMKGYNTDGIGCIKAI----- 112
Query: 351 ERQGINGVASHTSPIAGKIFVLVGAGGAGRALAFG-AKSRGARVIIFNRNYERAKALADA 409
+ I K V+ GAGGA RA++F A+ + I NR+ +AK+LA+
Sbjct: 113 ---------GEVTSIKDKNIVVAGAGGASRAISFYLARENPQSIHILNRDINKAKSLAED 163
Query: 410 VSGEAL----HFEYLHEF--FPEKGMILANASAIGMEPN-SDQSPVPKEALKAYELVFDA 462
+ L F+ + + + IL + + +GM P+ +D++ V E + + +V D
Sbjct: 164 LKNSKLTDNVDFDSIDKIVGYVSDADILIDTTPVGMSPHVNDEAIVKAEDMHSDLVVNDI 223
Query: 463 VYTPRNTRLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRK 512
VY P T LL EA + GAT V G++M + Q F ++TG AP D M K
Sbjct: 224 VYNPNETVLLSEAIKAGATPVYGIKMLLYQGAESFEIWTGEKAPVDVMEK 273
>gi|354568130|ref|ZP_08987296.1| Shikimate dehydrogenase [Fischerella sp. JSC-11]
gi|353541095|gb|EHC10565.1| Shikimate dehydrogenase [Fischerella sp. JSC-11]
Length = 287
Score = 145 bits (366), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 83/294 (28%), Positives = 149/294 (50%), Gaps = 30/294 (10%)
Query: 233 INPDTKIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLV--DDVKEFFRTYSGTDFA 290
I TK+ G++ P+ HS P++HN A + +Y+P + +D+ + ++
Sbjct: 2 ITGKTKLLGVIGYPIEHSLSPVMHNAAIAQLGIDYVYLPFPIKPEDLHTAIQGFAAIGVV 61
Query: 291 GFSVGIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALR 350
GFSV IPHK+ + V P+A+++GAVNT+I++ + +G NTD E ++ ++
Sbjct: 62 GFSVTIPHKQAILRSLSAVEPIAQAVGAVNTVIKK--NNSWIGTNTDIEGFLAPLQ---- 115
Query: 351 ERQGINGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRG-ARVIIFNRNYERAKALADA 409
+H + KI V++G GGA RA+ G G A + + RN +R + + +
Sbjct: 116 ---------AHQQNWSQKIAVILGNGGAARAVVAGCAKLGCAEIHVVGRNVQRLRDFSQS 166
Query: 410 VSGEALH-------FEYLHEFFPEKGMILANASAIGMEPNSDQSPVPKEA---LKAYELV 459
L ++ L E P+ + L N + IGM P D+SP+ L + +
Sbjct: 167 WENSPLQVNLNVHRWDELPELIPQADL-LVNTTPIGMYPKIDESPLSAAEMANLSSQAIA 225
Query: 460 FDAVYTPRNTRLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLA-PEDFMRK 512
+D +YTP T+ L++A ++G T + G+EM ++Q +++ + P D MR+
Sbjct: 226 YDLIYTPNPTKFLQQAQQIGVTAIDGLEMLVQQGAAALKIWLQRESVPVDVMRQ 279
>gi|289578257|ref|YP_003476884.1| shikimate 5-dehydrogenase [Thermoanaerobacter italicus Ab9]
gi|297544537|ref|YP_003676839.1| shikimate 5-dehydrogenase [Thermoanaerobacter mathranii subsp.
mathranii str. A3]
gi|289527970|gb|ADD02322.1| shikimate 5-dehydrogenase [Thermoanaerobacter italicus Ab9]
gi|296842312|gb|ADH60828.1| shikimate 5-dehydrogenase [Thermoanaerobacter mathranii subsp.
mathranii str. A3]
Length = 284
Score = 145 bits (366), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 94/292 (32%), Positives = 151/292 (51%), Gaps = 24/292 (8%)
Query: 233 INPDTKIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLV--DDVKEFFRTYSGTDFA 290
IN TK+FGL+ +PV HS P++HN AF+ N +Y V + +++ +
Sbjct: 3 INSKTKLFGLIGHPVEHSLSPLIHNYAFKSLNLNYVYTVFDVFPEKLEDAVKGIKALGIK 62
Query: 291 GFSVGIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALR 350
G +V IPHKE + D V A IGAVNT++ +G L GYNTD I ++ +
Sbjct: 63 GVNVTIPHKEKIIKYLDVVSEEALKIGAVNTLVNE--EGILKGYNTDVYGFIDSLTEV-- 118
Query: 351 ERQGINGVASHTSPIAGKIFVLVGAGGAGRALAFG-AKSRGARVIIFNRNYERAKALADA 409
I GK V++GAGGA +A+ A + ++I NRN E+AK L++
Sbjct: 119 -----------GEKIKGKKAVVLGAGGASKAVCVALALEKINEIVIANRNVEKAKELSEY 167
Query: 410 VSGE---ALHFEYLHEF--FPEKGMILANASAIGMEPNSDQSPVPKEALKAYELVFDAVY 464
+ E + ++ ++E PE IL N +++GM PN + SPV ++ + + V+D +Y
Sbjct: 168 IKREFKVSCNYCSINEVEKIPEMD-ILVNTTSVGMYPNVEDSPVCEKVVSRAKFVYDVIY 226
Query: 465 TPRNTRLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRKLVLE 516
P T L+ A G +G+ M + QA F+L+TGG ++ + + + E
Sbjct: 227 NPFETVFLKYAKRNGIKYSNGLSMLVNQANYSFKLWTGGFFDKNLVYRRLKE 278
>gi|428313606|ref|YP_007124583.1| shikimate dehydrogenase [Microcoleus sp. PCC 7113]
gi|428255218|gb|AFZ21177.1| shikimate dehydrogenase [Microcoleus sp. PCC 7113]
Length = 293
Score = 145 bits (366), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 87/296 (29%), Positives = 146/296 (49%), Gaps = 29/296 (9%)
Query: 230 LEHINPDTKIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLVD--DVKEFFRTYSGT 287
+ I TK+ G++ +P+ HS P++HN A + IY+P + D+ ++
Sbjct: 1 MSQITGKTKLLGVIGDPIEHSLSPVMHNAAIAEMGLDYIYLPFPIKTADLGVAIAGFAAI 60
Query: 288 DFAGFSVGIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIED 347
GFSV IPHK+ ++ EV +AK GAVNT+ R + G NTD E ++ +
Sbjct: 61 GVQGFSVTIPHKQAIISLLSEVSAIAKLTGAVNTVWRT--EQGWSGTNTDVEGFVAPL-- 116
Query: 348 ALRERQGINGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRG-ARVIIFNRNYERAKAL 406
Q +N S ++P V++G GGA RA+ G G A + + RN ++
Sbjct: 117 -----QALNRDWSQSTP------VILGHGGAARAVVVGCTQLGCAEIHVVGRNVQKLSQF 165
Query: 407 ADAVSGEAL-------HFEYLHEFFPEKGMILANASAIGMEPNSDQSPV---PKEALKAY 456
+ L ++ L E P+ +++ N++ +GM PN DQSP+ E L+
Sbjct: 166 QQSWVNAPLPITLNVHRWDELPELLPQADLVV-NSTPVGMYPNVDQSPLDAAAMELLRPD 224
Query: 457 ELVFDAVYTPRNTRLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRK 512
+ +D +YTP T+ L++A E GA + G+EM ++Q +++ P D MR+
Sbjct: 225 AIAYDLIYTPNPTQFLQQAQEQGAVAIDGLEMLVQQGAAALKIWVEQTPPVDIMRR 280
>gi|402815730|ref|ZP_10865322.1| shikimate dehydrogenase AroE [Paenibacillus alvei DSM 29]
gi|402506770|gb|EJW17293.1| shikimate dehydrogenase AroE [Paenibacillus alvei DSM 29]
Length = 298
Score = 145 bits (366), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 95/296 (32%), Positives = 157/296 (53%), Gaps = 21/296 (7%)
Query: 230 LEHINPDTKIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLV--DDVKEFFRTYSGT 287
+ +++ +K++ ++ +P+ HSK P++HN A + NG+Y V + ++
Sbjct: 13 VRNLDTSSKVYAVIGDPIAHSKSPLMHNAALQEMEVNGVYTAFHVKPEQLEHAVAGIRAL 72
Query: 288 DFAGFSVGIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIED 347
G +V IPHKE +A DE+ + IGAVNTI+ +GKL GYNTD + ++++
Sbjct: 73 GLGGVNVTIPHKEQVMAYLDEIDESTRVIGAVNTIVH--CEGKLYGYNTDGLGYVRSLQE 130
Query: 348 ALRERQGINGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGAR-VIIFNRNYERAKAL 406
++ + I V++GAGGA R +A+ + G + + I NR ERA AL
Sbjct: 131 EMQ------------ADIPSSRIVIIGAGGAARGIAYALLAEGCKELTIANRTVERAHAL 178
Query: 407 ADAVSG----EALHFEYLHEFFPEKGMILANASAIGMEPNSDQSPVPKEALKAYELVFDA 462
A+ +SG ++ P+ I+ +++GM P+ D+ PV KE L+++ LV D
Sbjct: 179 AEDLSGFGKVRSVMLNDTPAIPPQDVDIVIQTTSVGMHPHIDEMPVAKEWLQSHMLVSDI 238
Query: 463 VYTPRNTRLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRKLVLEQF 518
+Y P T LL+ A G + +G+ MF+ Q F L+TG AP + MR+ VLE
Sbjct: 239 IYNPLETALLQAAKAQGCRIHNGLGMFVHQGAIAFELWTGMKAPTELMRQKVLETL 294
>gi|428207318|ref|YP_007091671.1| shikimate dehydrogenase [Chroococcidiopsis thermalis PCC 7203]
gi|428009239|gb|AFY87802.1| shikimate dehydrogenase [Chroococcidiopsis thermalis PCC 7203]
Length = 294
Score = 145 bits (366), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 87/298 (29%), Positives = 152/298 (51%), Gaps = 17/298 (5%)
Query: 233 INPDTKIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLV--DDVKEFFRTYSGTDFA 290
I TK+ G++ +PV HS P +HN A H + +Y+P+ V +D+ + ++
Sbjct: 2 ITGKTKLLGVIGHPVEHSLSPAMHNAAIAHLGLDYVYLPLPVKPEDLAAALQGFAAIGLV 61
Query: 291 GFSVGIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALR 350
GF+ IPHK+ + EV P+A+++GAVNT+ R D G NTD E ++ + + +
Sbjct: 62 GFNATIPHKQAILPFLSEVSPVAQAVGAVNTVWRT--DEGWAGTNTDVEGFLAPLLEKSK 119
Query: 351 ERQGINGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRG-ARVIIFNRNYERAKALADA 409
+ + + S SP +I V++G GGA RA+ G G A + + RN + + +
Sbjct: 120 VKSQKSKIDSPDSP---QIAVILGNGGAARAVVAGCSQLGCAEICVVGRNEVKLQEFYTS 176
Query: 410 VSGEALHFE---YLHEFFPE---KGMILANASAIGMEPNSDQSPVP---KEALKAYELVF 460
S + Y + P+ + +L N + IGM P+ D+SP+ LK + +
Sbjct: 177 WSNSQVQANLQVYTWDKLPDLIARADLLVNTTPIGMYPHVDRSPLSLSEMAVLKQGAIAY 236
Query: 461 DAVYTPRNTRLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRKLVLEQF 518
D +YTPR T L++A + GA + G+EM ++Q +++ P + MR+ + +Q
Sbjct: 237 DLIYTPRPTLFLQQAQQQGARTIDGLEMLVQQGAAALKIWLQQPVPVEIMRQALQQQL 294
>gi|282898783|ref|ZP_06306770.1| Quinate/Shikimate 5-dehydrogenase [Cylindrospermopsis raciborskii
CS-505]
gi|281196310|gb|EFA71220.1| Quinate/Shikimate 5-dehydrogenase [Cylindrospermopsis raciborskii
CS-505]
Length = 308
Score = 145 bits (365), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 86/285 (30%), Positives = 144/285 (50%), Gaps = 32/285 (11%)
Query: 233 INPDTKIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLV--DDVKEFFRTYSGTDFA 290
I TKI G++ PV HS P++HN A H + +Y+P + D++++ ++
Sbjct: 12 ITGKTKIMGVIGYPVEHSLSPLMHNAALHHLGLDYVYLPFPIAPDNLQQAIAGFASIGVV 71
Query: 291 GFSVGIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALR 350
GF+V IPHK+ + E+ P+A++IGAVNT+IR + + +G NTD I+ ++
Sbjct: 72 GFNVTIPHKQAIIPLLHEISPVAQAIGAVNTVIR--VGERWIGTNTDVAGFIAPLQTTYN 129
Query: 351 ERQGINGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRG-ARVIIFNRNYERAKALADA 409
+ K V++G GGA RA+ G G A + + RN E+ K L +
Sbjct: 130 QNW------------HEKKAVVIGNGGAARAVVAGCIQLGMAEIHLVGRNIEKLKQLEQS 177
Query: 410 VSGEAL-----------HFEYLHEFFPEKGMILANASAIGMEPNSDQSPVPKEALK---A 455
L ++ L + P+ + L N + IGM PN D+SPV ++ L +
Sbjct: 178 WIDSPLAHELTNKLKTHSWDQLPQLIPQCNL-LVNTTPIGMYPNIDESPVTEDQLHKLPS 236
Query: 456 YELVFDAVYTPRNTRLLREAAEVGATVVSGVEMFIRQALGQFRLF 500
+ + +D +YTP+ TR L+ A GA + G+EM ++Q +L+
Sbjct: 237 HAIAYDLIYTPKPTRFLQLAQAQGAIALDGLEMLVQQGAAALKLW 281
>gi|303249289|ref|ZP_07335521.1| Shikimate dehydrogenase substrate binding domain protein
[Desulfovibrio fructosovorans JJ]
gi|302489295|gb|EFL49252.1| Shikimate dehydrogenase substrate binding domain protein
[Desulfovibrio fructosovorans JJ]
Length = 270
Score = 144 bits (364), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 96/282 (34%), Positives = 145/282 (51%), Gaps = 24/282 (8%)
Query: 237 TKIFGLVSNPVGHSKGPILHNPAFRHTRFNGIY--VPMLVDDVKEFFRTYSGTDFAGFSV 294
+++FG++ +P+GH+ P++HN F+ Y P L +++ F T G SV
Sbjct: 2 SRVFGIIGHPLGHTLSPLVHNWGFKRFGIKARYEAWPTLPEELGAFMVRLRETPVEGLSV 61
Query: 295 GIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALRERQG 354
IPHK P +A D V L +S+GAVNT+ R DG+L NTD E +
Sbjct: 62 TIPHKTPVMAYVDAVTDLGRSVGAVNTLYWR--DGELWAENTDVEGFCRPLV-------- 111
Query: 355 INGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGA-RVIIFNRNYERAKALADAVSGE 413
+ G+A + +++G GG RA G G R+ + R+ E+A LA E
Sbjct: 112 LRGIAPRAA-------LILGCGGVARAAVAGLVRLGVERLAVTGRSAEKAAVLAGEFGLE 164
Query: 414 ALHFEYLHEFFPEKGMILANASAIGMEPNSDQ-SPVPKEALKAYELVFDAVYTPRNTRLL 472
+ ++ +F +L NA+ +GM + SP P EAL +V+D VYTP T
Sbjct: 165 RVDWDRRADF---PAGLLVNATPMGMTGRLEGLSPYPAEALGPDHVVYDLVYTPDPTHFG 221
Query: 473 REAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRKLV 514
+A G VVSG+EMF+ QA+ QFRL+TG + P+D +R L+
Sbjct: 222 ADALAAGGLVVSGMEMFLYQAVEQFRLWTGRILPDDELRTLL 263
>gi|339010605|ref|ZP_08643175.1| shikimate dehydrogenase [Brevibacillus laterosporus LMG 15441]
gi|338772760|gb|EGP32293.1| shikimate dehydrogenase [Brevibacillus laterosporus LMG 15441]
Length = 277
Score = 144 bits (364), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 106/286 (37%), Positives = 151/286 (52%), Gaps = 20/286 (6%)
Query: 239 IFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLVDD--VKEFFRTYSGTDFAGFSVGI 296
+ GL PVGHS P++HN AF + Y V+D +KE G +V I
Sbjct: 1 MVGLFGRPVGHSLSPVMHNTAFEQKQLPFAYAAFEVNDDQIKEAVEAIRALGMRGANVTI 60
Query: 297 PHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALRERQGIN 356
PHK + D++ PLA+ IGAVNTI+ DG L+GYNTD + + L E GI+
Sbjct: 61 PHKVAVIPYLDKIDPLAERIGAVNTIVNE--DGTLIGYNTDGTGYVRS----LLEETGID 114
Query: 357 GVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGARVI-IFNRNYERAKALADAVSGEAL 415
+ + L+GAGGA RA+A RG + I I NR+ ERA+ LA A+ +
Sbjct: 115 --------LTEQTVTLLGAGGAARAVACTLVERGVKEIRIVNRSLERAELLAMALGSQIP 166
Query: 416 HFEY---LHEFFPEKGMILANASAIGMEPNSDQSPVPKEALKAYELVFDAVYTPRNTRLL 472
Y E + +L N ++IGM P+ + PV ++ L+ +V D +Y P T+LL
Sbjct: 167 IRVYSFAQAELAIQDSTLLINTTSIGMYPHIHEMPVDRKCLRPDLIVSDLIYNPLETQLL 226
Query: 473 REAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRKLVLEQF 518
+ A E+GAT SG+ MFI Q + L+TG AP D MR++VL+
Sbjct: 227 QCAKEIGATHHSGLGMFINQGALAYELWTGEAAPTDKMREIVLQHL 272
>gi|212638656|ref|YP_002315176.1| shikimate 5-dehydrogenase [Anoxybacillus flavithermus WK1]
gi|212560136|gb|ACJ33191.1| Shikimate 5-dehydrogenase [Anoxybacillus flavithermus WK1]
Length = 299
Score = 144 bits (364), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 95/284 (33%), Positives = 141/284 (49%), Gaps = 18/284 (6%)
Query: 238 KIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLVDD--VKEFFRTYSGTDFAGFSVG 295
K+F L+ PV HS P++HN AF+ + Y V+ +KE AGF+V
Sbjct: 26 KLFALIGCPVHHSLSPLMHNDAFQSLHIDAHYHAFHVEPHMLKEAVEGLKALQCAGFNVT 85
Query: 296 IPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALRERQGI 355
IPHK + DE+ AK +GAVNT++ +GK VGYNTD E + A L E+ I
Sbjct: 86 IPHKTAVMEYMDELDETAKQMGAVNTVVNE--NGKWVGYNTDGEGFVRA----LCEQMNI 139
Query: 356 NGVASHTSPIAGKIFVLVGAGGAGRALAFGA-KSRGARVIIFNRNYERAKALADAVSGEA 414
++G +++GAGGA R + F K A + + NR E+A+
Sbjct: 140 E--------LSGARILIIGAGGAARGIYFTLLKHEAATIDVCNRTPEKAETFIQKERSAV 191
Query: 415 LHFEYLHEFFPEKGMILANASAIGMEPNSDQSPVPKEALKAYELVFDAVYTPRNTRLLRE 474
E E +I+ N +++GM P+ D P+ + LK+ +V D +Y P T+ L+E
Sbjct: 192 YSLEQAEERLGAYDIII-NTTSVGMYPHVDTMPISLQTLKSGTIVSDIIYNPLMTKFLQE 250
Query: 475 AAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRKLVLEQF 518
A E GA V +GV MF+ Q F +TG M +LV++Q
Sbjct: 251 AKEKGARVQNGVGMFVYQGALAFEKWTGIFPNTKRMEQLVIQQL 294
>gi|428772149|ref|YP_007163937.1| shikimate dehydrogenase [Cyanobacterium stanieri PCC 7202]
gi|428686428|gb|AFZ46288.1| shikimate dehydrogenase [Cyanobacterium stanieri PCC 7202]
Length = 286
Score = 144 bits (364), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 91/298 (30%), Positives = 153/298 (51%), Gaps = 29/298 (9%)
Query: 232 HINPDTKIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLV--DDVKEFFRTYSGTDF 289
+I TK+ G++ NP+ HS PI+ N A + IYVP V D ++ + D
Sbjct: 2 NITGKTKVLGIIGNPIEHSLSPIIQNRAIAFLNLDYIYVPFPVMGDSLQVALDGFRAIDV 61
Query: 290 AGFSVGIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDAL 349
GF+V IPHK+ + E+ A+ IGAVNT+ + P G NTD + I+ ++
Sbjct: 62 QGFNVTIPHKQAVMPFLSEISDTAQLIGAVNTVWQTPEGWH--GTNTDIDGFIAPLKALN 119
Query: 350 RERQGINGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGARVI-IFNRNYERAKALAD 408
R+ + + +PI ++G GGA RA+ G G R I + R+ ++ + +
Sbjct: 120 RDWEDV-------TPI------ILGNGGASRAVVVGCAQLGCREIKVVGRSLDKLQQFKN 166
Query: 409 AVSGEALH-------FEYLHEFFPEKGMILANASAIGMEPNSDQSPVPKEA---LKAYEL 458
+ + L + L++ P +I+ N + +GM P+ D+SP+ + LK +
Sbjct: 167 SWDEQLLQAKITIHPWSDLNDTLPHSELIV-NTTPLGMSPHVDKSPLDDQQISLLKLGAI 225
Query: 459 VFDAVYTPRNTRLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRKLVLE 516
V+D +YTPR T LL++A GA ++ G EM ++Q F+++T AP D MR+ +L+
Sbjct: 226 VYDLIYTPRPTLLLQKAQNQGAIIIDGTEMLVQQGAVGFQIWTEKNAPVDVMRQALLD 283
>gi|420263280|ref|ZP_14765918.1| shikimate dehydrogenase [Enterococcus sp. C1]
gi|394769568|gb|EJF49413.1| shikimate dehydrogenase [Enterococcus sp. C1]
Length = 289
Score = 144 bits (364), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 91/299 (30%), Positives = 150/299 (50%), Gaps = 30/299 (10%)
Query: 231 EHINPDTKIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLV--DDVKEFFRTYSGTD 288
+ I T++ L + P HS P +HN +F + +Y+ V DD+ ++ D
Sbjct: 3 QMITGHTRLAALFAKPAKHSISPAMHNLSFEEQGIDAVYLAFDVEPDDLAASIQSIRQLD 62
Query: 289 FAGFSVGIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDA 348
G ++ +PHK AV DE P A+ IGA+NTI+ + +G+L+G+NTD + A+ED
Sbjct: 63 LLGVNLSMPHKMAAVPLMDECSPAAELIGAINTIVNQ--EGRLIGHNTDGIGFMRALEDI 120
Query: 349 LRERQGINGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGARVI-IFNRN-------Y 400
I GK ++GAGGA A+ A G + I +FNR
Sbjct: 121 -------------QVSIIGKTMTVIGAGGAATAIISQAALDGVKTIRVFNRKDEFYPIIQ 167
Query: 401 ERAKALADAVSGEA----LHFEYLHEFFPEKGMILANASAIGMEPNSDQSPVPKEALKAY 456
E+ +A+ + E L + + ++ +L NA+ +GM+PN SP+ + L
Sbjct: 168 EKLTQIAEKTASEITLTDLEDQTALKTAIDQSSLLVNATGVGMKPNDTVSPLKDKTLLRE 227
Query: 457 EL-VFDAVYTPRNTRLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRKLV 514
L V+D +Y PR ++LL++A EVGA +G+ M + Q F+L+TG P + ++ L+
Sbjct: 228 SLAVYDVIYNPRESQLLKDAKEVGAKTANGLSMLLYQGAAAFKLWTGQEMPVEKVKALI 286
>gi|194017689|ref|ZP_03056299.1| shikimate 5-dehydrogenase [Bacillus pumilus ATCC 7061]
gi|194010589|gb|EDW20161.1| shikimate 5-dehydrogenase [Bacillus pumilus ATCC 7061]
Length = 280
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 94/287 (32%), Positives = 151/287 (52%), Gaps = 22/287 (7%)
Query: 239 IFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLV--DDVKEFFRTYSGTDFAGFSVGI 296
++G++ NPVGHS P +HN A + +G Y V DD+K+ +GF+V +
Sbjct: 4 LYGVIGNPVGHSMSPDIHNAALKDAGIDGHYHGFQVENDDLKDAISGMKALGISGFNVTV 63
Query: 297 PHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALRERQGIN 356
PHK + D++ A+ + AVNT+ R G+LVGYNTD E + ++ +AL +
Sbjct: 64 PHKVDIMQYLDKIDVTAERLRAVNTV--RLEGGQLVGYNTDGEGFLHSLLEALDQ----- 116
Query: 357 GVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGARVI-IFNRNYERAKALADAVSGE-- 413
P++ F+++GAGGA A+ + I NR E+A+AL ++ +G
Sbjct: 117 -------PLSELSFLMIGAGGAANAIYTTIADYAPKSFDITNRTIEKAEALIESANGNFT 169
Query: 414 --ALHFEYLHEFFPEKGMILANASAIGMEPNSDQSPVPKEALKAYELVFDAVYTPRNTRL 471
A+ + E E +I+ + ++IGM PN +++P+ K +V D VY P T+L
Sbjct: 170 SSAITLKTAEEQLGEYDVII-HTTSIGMHPNVEETPISLVNAKKTAVVCDIVYNPIETKL 228
Query: 472 LREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRKLVLEQF 518
LREAA +G V GV MF+ QA F L+TG M+ +V+++
Sbjct: 229 LREAAGLGLKTVDGVGMFVGQAARAFELWTGITPDARKMKSIVIQKL 275
>gi|270307833|ref|YP_003329891.1| shikimate 5-dehydrogenase [Dehalococcoides sp. VS]
gi|270153725|gb|ACZ61563.1| shikimate 5-dehydrogenase [Dehalococcoides sp. VS]
Length = 286
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 96/288 (33%), Positives = 145/288 (50%), Gaps = 27/288 (9%)
Query: 235 PDTKIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLV--DDVKEFFRTYSGTDFAGF 292
PD +FG++ PV HS P + N AF++ + N +Y+ + +D++ + + G
Sbjct: 5 PDA-LFGIIGYPVSHSISPAMQNAAFKYCKLNYLYLTIAAKPEDLQNVIASMRPLNIRGL 63
Query: 293 SVGIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALRER 352
+V IPHK + D + P AK IGAVNTI+ +G L GYNTD + +E
Sbjct: 64 NVTIPHKIEVIKYIDVLDPAAKKIGAVNTIVNE--NGVLKGYNTDFGGFVRLLEH----- 116
Query: 353 QGINGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGARVIIFNRNYERAKALADAV-- 410
+ +P A F L+GAGG+ A+A + G R+ + R E+AK LA +
Sbjct: 117 -------NRIAP-AKHCFALLGAGGSAHAIALAICTLGGRLTVLARQEEKAKDLASKMCL 168
Query: 411 --SGEALHFEY----LHEFFPEKGMILANASAIGMEPNSDQSPVPKEALKAYELVFDAVY 464
+G+A E L E E +I+ N + +GM + QS VP L+ V DA+Y
Sbjct: 169 RFNGKAQGLELNDTNLEEVLAETDIIV-NCTPVGMGNLAGQSLVPARFLRPDLTVIDAIY 227
Query: 465 TPRNTRLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRK 512
P TRLL+EA GA +++G+EM + Q F ++T AP M K
Sbjct: 228 NPCKTRLLKEAENKGAKIINGLEMLVWQGAMSFEIWTSQKAPFRVMMK 275
>gi|374295740|ref|YP_005045931.1| shikimate dehydrogenase [Clostridium clariflavum DSM 19732]
gi|359825234|gb|AEV68007.1| shikimate dehydrogenase [Clostridium clariflavum DSM 19732]
Length = 293
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 88/288 (30%), Positives = 147/288 (51%), Gaps = 26/288 (9%)
Query: 237 TKIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLVD--DVKEFFRTYSGTDFAGFSV 294
TK+ GL+ NPV HS P LHN + + IYVP+ VD D++ + T+F GF+V
Sbjct: 11 TKLLGLIGNPVEHSISPQLHNSLSKILGLDLIYVPLRVDKEDLETLVKALKATEFVGFNV 70
Query: 295 GIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALRERQG 354
+P+K + D A +G+VNT+ + IDG+L GYNTD E + A ++A
Sbjct: 71 TVPYKREIMKFLDGNTKEAILMGSVNTV--KKIDGRLYGYNTDGEGFLRAFKEA------ 122
Query: 355 INGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGA-RVIIFNRNYERAKALADAVSGE 413
+ GK V++GAGGA R +A GA ++ + NR +++ LA+ V+
Sbjct: 123 ------AGTDFKGKKVVMLGAGGAARPIAVKIALEGAEKISLVNRTTQKSVELAEVVNEN 176
Query: 414 ALHFEYLHEF--------FPEKGMILANASAIGMEPNSDQSPVPKEALKAYELVFDAVYT 465
++ F F E +I+ N +++GM P+ D S + + ++V+D +Y
Sbjct: 177 IAEIVQVYNFEDKTLKLAFEESDIII-NTTSVGMSPDIDNSLISDTSYFNGQIVYDIIYN 235
Query: 466 PRNTRLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRKL 513
P T+ L +A G +++G+ M Q + + ++TG E+ +R L
Sbjct: 236 PVKTKFLADAESRGCKIINGLGMLFYQGINAYEIWTGVKISEEILRDL 283
>gi|389571866|ref|ZP_10161954.1| shikimate 5-dehydrogenase [Bacillus sp. M 2-6]
gi|388428352|gb|EIL86149.1| shikimate 5-dehydrogenase [Bacillus sp. M 2-6]
Length = 280
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 96/287 (33%), Positives = 152/287 (52%), Gaps = 22/287 (7%)
Query: 239 IFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLV--DDVKEFFRTYSGTDFAGFSVGI 296
++G++ NPVGHS P +HN A + +G Y V DD+K+ +G +V +
Sbjct: 4 LYGVIGNPVGHSMSPDIHNAALKDAGIDGHYHGFQVENDDLKDAISGMKALGISGINVTV 63
Query: 297 PHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALRERQGIN 356
PHK + D++ A+ +GAVNT+ R +LVGYNTD E + ++ +AL +
Sbjct: 64 PHKVEIMKYLDKIDVTAERLGAVNTV--RLEGDQLVGYNTDGEGFLHSLLEALDQ----- 116
Query: 357 GVASHTSPIAGKIFVLVGAGGAGRALAFG-AKSRGARVIIFNRNYERAKALADAVSGE-- 413
P++ F+L+GAGGA RA+ A+ + I NR E+A+AL ++ G+
Sbjct: 117 -------PLSELSFLLLGAGGAARAIYTTIAEYAPKQFDIANRTIEKAEALIESADGKIT 169
Query: 414 --ALHFEYLHEFFPEKGMILANASAIGMEPNSDQSPVPKEALKAYELVFDAVYTPRNTRL 471
A+ E E +I+ + ++IGM PN +++P+ K +V D VY P T+L
Sbjct: 170 SRAIALNTAEERLGEYDVII-HTTSIGMYPNVEETPISLANAKKTAVVCDIVYNPIETKL 228
Query: 472 LREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRKLVLEQF 518
L EAA +G V GV MF+ QA+ F L+TG M+ +V+E+
Sbjct: 229 LSEAAGLGLKTVDGVGMFVGQAVRAFELWTGITPDARKMKSIVIEKL 275
>gi|350266770|ref|YP_004878077.1| shikimate dehydrogenase [Bacillus subtilis subsp. spizizenii
TU-B-10]
gi|349599657|gb|AEP87445.1| shikimate dehydrogenase [Bacillus subtilis subsp. spizizenii
TU-B-10]
Length = 280
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 98/287 (34%), Positives = 152/287 (52%), Gaps = 26/287 (9%)
Query: 238 KIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLV--DDVKEFFRTYSGTDFAGFSVG 295
K+FG++ NP+GHS P +HN + + +G Y V DD+++ + G +V
Sbjct: 3 KLFGVIGNPIGHSMSPDIHNASLKDLSLDGHYHAFKVEEDDLEDAVKGIRALGVHGINVT 62
Query: 296 IPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALRERQGI 355
+PHK + D + AK IGAVNT+ RR D KLVGYNTD E + ++ L +
Sbjct: 63 VPHKVSIMDYLDHIDDSAKVIGAVNTV-RREGD-KLVGYNTDGEGFVKSLMKVLDK---- 116
Query: 356 NGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGA--RVIIFNRNYERAKALADAV--- 410
PI+ F+++GAGGA RA+ F +R + I NR E+AK L ++
Sbjct: 117 --------PISELSFLMIGAGGAARAI-FTTIARNVPKKFDICNRTLEKAKQLTESTPSF 167
Query: 411 -SGEALHFEYLHEFFPEKGMILANASAIGMEPNSDQSPVPKEALKAYELVFDAVYTPRNT 469
+ E L + E + +I+ + +++GM PN D P+ + + +V D VY P T
Sbjct: 168 HNKEVLSIKEAEERLEQYDVII-HTTSVGMYPNVDDVPISLQRAASSAVVCDIVYNPIQT 226
Query: 470 RLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPE-DFMRKLVL 515
LL+EA + G + GV MF+ QA F+L+T GL P+ + MR +V+
Sbjct: 227 ALLKEAHQKGLKTLDGVGMFVEQAALSFQLWT-GLEPDIEKMRSIVI 272
>gi|296333275|ref|ZP_06875728.1| shikimate 5-dehydrogenase [Bacillus subtilis subsp. spizizenii ATCC
6633]
gi|305675221|ref|YP_003866893.1| shikimate 5-dehydrogenase [Bacillus subtilis subsp. spizizenii str.
W23]
gi|296149473|gb|EFG90369.1| shikimate 5-dehydrogenase [Bacillus subtilis subsp. spizizenii ATCC
6633]
gi|305413465|gb|ADM38584.1| shikimate 5-dehydrogenase [Bacillus subtilis subsp. spizizenii str.
W23]
Length = 280
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 95/286 (33%), Positives = 150/286 (52%), Gaps = 24/286 (8%)
Query: 238 KIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLV--DDVKEFFRTYSGTDFAGFSVG 295
K++G++ NP+GHS P +HN + + +G Y V DD+++ + G +V
Sbjct: 3 KLYGVIGNPIGHSMSPDIHNASLKDLSLDGHYHAFKVEEDDLEDAVKGIRALGVHGINVT 62
Query: 296 IPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALRERQGI 355
+PHK + D + AK IGAVNT+ RR D KLVGYNTD E + ++ L +
Sbjct: 63 VPHKVSIMDYLDHIDDSAKVIGAVNTV-RREGD-KLVGYNTDGEGFVKSLMKVLDK---- 116
Query: 356 NGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGA--RVIIFNRNYERAKALADAV--- 410
PI+ F+++GAGGA RA+ F +R + I NR E+AK L ++
Sbjct: 117 --------PISELSFLMIGAGGAARAI-FTTIARNVPKKFDICNRTLEKAKQLTESTPSF 167
Query: 411 -SGEALHFEYLHEFFPEKGMILANASAIGMEPNSDQSPVPKEALKAYELVFDAVYTPRNT 469
+ E L + E + +I+ + +++GM PN D+ P+ + + +V D VY P T
Sbjct: 168 HNKEVLSIKEAEERLKQYDVII-HTTSVGMYPNVDEVPISLQRAASSAVVCDIVYNPIQT 226
Query: 470 RLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRKLVL 515
LL+EA + G + GV MF+ QA F+L+TG + MR +V+
Sbjct: 227 ALLKEANQKGLKTLDGVGMFVEQAALSFQLWTGQEPDIEKMRSIVI 272
>gi|325570234|ref|ZP_08146100.1| shikimate dehydrogenase [Enterococcus casseliflavus ATCC 12755]
gi|325156717|gb|EGC68891.1| shikimate dehydrogenase [Enterococcus casseliflavus ATCC 12755]
Length = 292
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 93/306 (30%), Positives = 153/306 (50%), Gaps = 32/306 (10%)
Query: 224 LKQVYQLEHINPDTKIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLV--DDVKEFF 281
+ Q+ Q+ I T++ L + P HS P +HN +F + +Y+ V DD+
Sbjct: 1 MNQMKQM--ITGHTRLAALFAKPAKHSISPAMHNLSFEEQGIDAVYLAFDVEPDDLAASI 58
Query: 282 RTYSGTDFAGFSVGIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESA 341
++ D G ++ +PHK AV DE P A+ IGA+NTI+ + +G+L+G+NTD
Sbjct: 59 QSIRQLDLLGVNLSMPHKMAAVPLMDECSPAAELIGAINTIVNQ--EGRLIGHNTDGIGF 116
Query: 342 ISAIEDALRERQGINGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGARVI-IFNRN- 399
+ A+ED I GK ++GAGGA A+ A G + I +FNR
Sbjct: 117 MRALEDI-------------QVSIIGKTMTVIGAGGAATAIISQAALDGVKTIRVFNRKD 163
Query: 400 ------YERAKALADAVSGEA----LHFEYLHEFFPEKGMILANASAIGMEPNSDQSPVP 449
E+ +A+ + E L + + ++ +L NA+ +GM+PN SP+
Sbjct: 164 EFYPIIQEKLTQIAEKTASEITLTDLEDQTALKTAIDQSSLLVNATGVGMKPNDTVSPLK 223
Query: 450 KEALKAYEL-VFDAVYTPRNTRLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPED 508
+ L L V+D +Y PR T+LL++A VGA +G+ M + Q F+L+TG P +
Sbjct: 224 DKTLLRESLAVYDIIYNPRETQLLKDAKAVGAKTANGLSMLLYQGAAAFKLWTGQEMPVE 283
Query: 509 FMRKLV 514
++ L+
Sbjct: 284 KVKALI 289
>gi|333995685|ref|YP_004528298.1| putative 3-dehydroquinate dehydratase, type 1/shikimate
5-dehydrogenase [Treponema azotonutricium ZAS-9]
gi|333734548|gb|AEF80497.1| putative 3-dehydroquinate dehydratase, type 1/shikimate
5-dehydrogenase [Treponema azotonutricium ZAS-9]
Length = 504
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 137/531 (25%), Positives = 229/531 (43%), Gaps = 63/531 (11%)
Query: 17 CETTEEMQASIE--QAKVEGADLVELCIDSMEFSHISEVDKLIQHPTLPAIVSYR--LKS 72
C T + + IE Q + D+ EL D ++ + + + LP I++ R L
Sbjct: 7 CLTGKTLARDIEVLQKYQKYVDIAELRADCLDPDERFLIRRFPEMAGLPVILTIRRSLDG 66
Query: 73 SRKSSDEACKNTCL-------QVLRRALDLDVEFVEMDYEVASDPLMSEIIYSRSNTKII 125
+ E + T L + RR + +V+++ ++ P + E +R+ I
Sbjct: 67 GKYVGGEGARITLLSKGLAFAEADRRR---NFAYVDLEDDLYV-PSLEEA--ARTYGTRI 120
Query: 126 VSSYLNGGGKPTTEKLGDVIACMQATGADVMKLEIAVDSITDLAPVFEMLTHC-QVPLIA 184
+ SY N G L + ++ G +++K + S+ D V++ + I
Sbjct: 121 IRSYHNMNG--VDHDLAAKLRELRRVGDELVKAAVMPQSLDDTIRVYQAAKETSDLEKIL 178
Query: 185 LAVGSRGLISQLLGPKFGGFLVYGSLGGKSVPGLPTLVS-------LKQVYQLEHINPDT 237
L +G G+ +++L G +L Y ++ G+ P +P S L + + I T
Sbjct: 179 LCMGDYGVSTRILAEPMGSYLSYTTVKGE--PDMPAGASGQLDPRELAEQFHFREITGKT 236
Query: 238 KIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLVDDVKEFFRTYSGTDFAGFSVGIP 297
KIFG+ P+ S P N F + + +Y+P D + R +G SV +P
Sbjct: 237 KIFGVTGFPLKVSASPHFFNTVFDIEKTDAVYIPFPADSIHSLIRLAEEIRISGVSVTVP 296
Query: 298 HKE---PAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALRERQG 354
+KE P + C + L +SIGA NTI+ DG +GYNTD + D+L E G
Sbjct: 297 YKESVLPFLFCKSD---LVQSIGACNTIVSSA-DG-WMGYNTDAQ----GFTDSLLEFSG 347
Query: 355 INGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGARVIIFNRNYERAKALADAVSGEA 414
+ GK +VGAGG RA+A + +I NR RA+ +A
Sbjct: 348 -------RKDLRGKRVTIVGAGGVSRAVAAEVYRLKGKALILNRTAVRARDVA------- 393
Query: 415 LHFEYLHEFFPEKGM--------ILANASAIGMEPNSDQSPVPKEALKAYELVFDAVYTP 466
L +++ KG+ I+ +++GMEP D P+ ELV D +Y P
Sbjct: 394 LPYKFAWASLDNKGIEMMEKYADIIIQTTSVGMEPLPDADPIEFYHFTGKELVMDLIYKP 453
Query: 467 RNTRLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRKLVLEQ 517
TR L A G +++G +M IRQA Q+ F G P + ++ L++
Sbjct: 454 AKTRCLVRAEASGCRILNGYDMLIRQARYQYTYFMGKEFPPSLISRVKLQE 504
>gi|326390171|ref|ZP_08211732.1| shikimate 5-dehydrogenase [Thermoanaerobacter ethanolicus JW 200]
gi|325993819|gb|EGD52250.1| shikimate 5-dehydrogenase [Thermoanaerobacter ethanolicus JW 200]
Length = 292
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 99/299 (33%), Positives = 153/299 (51%), Gaps = 29/299 (9%)
Query: 224 LKQVYQLEHINPDTKIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVP--MLVDDVKEFF 281
LK + +E IN TK++GL+ +PV HS P++HN AF+ N +Y +L + +++
Sbjct: 3 LKGLRDME-INSSTKLYGLIGHPVEHSLSPLIHNYAFKSLNLNCVYTAFDVLPEKLEDAV 61
Query: 282 RTYSGTDFAGFSVGIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESA 341
+ GF+V +PHKE + D V A IGAVNT++ G L GYNTD
Sbjct: 62 KGAKALGIKGFNVTVPHKEKIIKYLDVVSEEALKIGAVNTVVNE--GGILKGYNTDVYGF 119
Query: 342 ISAIEDALRERQGINGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGA-RVIIFNRNY 400
I ++ + I G+ V++GAGGA +A+ +G +II NR+
Sbjct: 120 IDSLTEV-------------GEKIEGRKAVVLGAGGASKAVCVALALKGIDSIIIANRSV 166
Query: 401 ERAKALADAVSGE-ALHFEYLH----EFFPEKGMILANASAIGMEPNSDQSPVPKEALKA 455
ERAK L++ + E + +Y E PE M L N +++GM PN + SPV + +
Sbjct: 167 ERAKDLSEYIKREFKVQCDYCSINEVEEIPEIAM-LVNTTSMGMYPNVEDSPVSERVVSK 225
Query: 456 YELVFDAVYTPRNTRLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRKLV 514
+ V+D +Y P T L+ A + G +G+ M + QA F+L+TG E F + LV
Sbjct: 226 AKFVYDLIYNPFETTFLKHAKKNGIKYSNGLFMLLNQANYSFKLWTG----EFFDKNLV 280
>gi|333987942|ref|YP_004520549.1| shikimate dehydrogenase [Methanobacterium sp. SWAN-1]
gi|333826086|gb|AEG18748.1| Shikimate dehydrogenase [Methanobacterium sp. SWAN-1]
Length = 283
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 98/300 (32%), Positives = 149/300 (49%), Gaps = 34/300 (11%)
Query: 233 INPDTKIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLVDDVKEFFRTY----SGTD 288
I T IFG++ +PV HS P +HN F + +YVP V K + ++
Sbjct: 2 ITGKTSIFGIMGDPVEHSLSPPMHNTTFSKLAIDSVYVPFHVK--KGYLQSAMVGARSMG 59
Query: 289 FAGFSVGIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDA 348
G +V IPHK + D + AK IGAVNT+ + + ++ GYNTD A+ AIE+
Sbjct: 60 IKGLNVTIPHKTAVIEYLDSLDTAAKLIGAVNTV--KFDENEVKGYNTDGLGAVKAIEEV 117
Query: 349 LRERQGINGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGAR-VIIFNRNYERAKALA 407
+ + K V++GAGGA RA++F GA ++I NR +E+A L
Sbjct: 118 --------------TTVKNKKVVILGAGGAARAISFQILLEGAESLVIANRTFEKAIELK 163
Query: 408 DAVSGE--------ALHFEYLHEFFPEKGMILANASAIGMEPNSDQSP-VPKEALKAYEL 458
+ ++G+ L F+ +E + IL N + IGM PN +Q P V + + +
Sbjct: 164 EDLAGKLDVNVKTVTLGFDLENEL--KNADILINTTPIGMYPNVNQKPLVTADMMHGGLV 221
Query: 459 VFDAVYTPRNTRLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRKLVLEQF 518
V D VY P T LL+EA + GA +SG +M I Q + FR++TG P D ++ +
Sbjct: 222 VNDVVYNPLETGLLKEARKAGAQTISGTKMLIYQGVEAFRIWTGIEPPVDIFEMALMNEL 281
>gi|282895773|ref|ZP_06303860.1| aroK (Quinate/Shikimate 5-dehydrogenase) [Raphidiopsis brookii D9]
gi|281199273|gb|EFA74139.1| aroK (Quinate/Shikimate 5-dehydrogenase) [Raphidiopsis brookii D9]
Length = 303
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 88/281 (31%), Positives = 144/281 (51%), Gaps = 32/281 (11%)
Query: 237 TKIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLV--DDVKEFFRTYSGTDFAGFSV 294
TKI G++ PV HS P++HN A H + +Y+P + D+++E ++ GF+V
Sbjct: 16 TKIMGVIGYPVEHSLSPLMHNAALDHLGLDYVYLPFPIAPDNLQEAIACFASIGVVGFNV 75
Query: 295 GIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALRERQG 354
IPHK+ + ++ P+A++IGAVNT+IR + K VG NTD I+ ++ +
Sbjct: 76 TIPHKQAIIPLLHDLSPIAQAIGAVNTVIR--VGEKWVGTNTDVAGFIAPLQSTYNQNW- 132
Query: 355 INGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGARVI-IFNRNYERAK--------- 404
K V++G GGA +A+ G G I + RN E+ K
Sbjct: 133 -----------HEKKAVVIGNGGAAKAVVAGCIQLGMTEIHLVGRNIEKLKQFEQSWIDS 181
Query: 405 ALADAVSGE-ALH-FEYLHEFFPEKGMILANASAIGMEPNSDQSPVPKEALK---AYELV 459
LAD + + +H +E L + P+ + L N + IGM PN D+SPV ++ L ++ +
Sbjct: 182 TLADKFTNKLKIHSWEKLPQLIPQSNL-LVNTTPIGMYPNIDESPVTEDQLHQLPSHAIA 240
Query: 460 FDAVYTPRNTRLLREAAEVGATVVSGVEMFIRQALGQFRLF 500
+D +Y P+ TR L A GA + G+EM ++Q +L+
Sbjct: 241 YDLIYIPKPTRFLELAQTQGAIALDGLEMLVQQGAAALKLW 281
>gi|336476220|ref|YP_004615361.1| shikimate 5-dehydrogenase [Methanosalsum zhilinae DSM 4017]
gi|335929601|gb|AEH60142.1| shikimate 5-dehydrogenase [Methanosalsum zhilinae DSM 4017]
Length = 272
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 98/285 (34%), Positives = 141/285 (49%), Gaps = 24/285 (8%)
Query: 238 KIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLV--DDVKEFFRTYSGTDFAGFSVG 295
K+F + +PV HS P++HN A FNG+Y V D+++ F G ++
Sbjct: 2 KVFAVFGDPVKHSLSPMMHNAAMLELGFNGVYHAFQVKSSDLRDAIYGAKAMGFGGVNLT 61
Query: 296 IPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALRERQGI 355
+PHKE A+ PLA IGAVNTI R + GYNTD A+ + D+ GI
Sbjct: 62 VPHKEKALEFI-RPDPLAAKIGAVNTIDFRE---GITGYNTDGIGALRTLLDS-----GI 112
Query: 356 NGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGARVIIFNRNYERAKALADAVS---- 411
+ I ++VGAGGA RA++F S GA + I NR ERA LA+ V+
Sbjct: 113 D--------IRNASVLIVGAGGAARAISFQLASEGAHITIANRTQERALKLAEEVNEVGR 164
Query: 412 GEALHFEYLHEFFPEKGMILANASAIGMEPNSDQSPVPKEALKAYELVFDAVYTPRNTRL 471
+ E L E IL N + +GM P D + + + VFD VY P T+L
Sbjct: 165 AKGAGLEDLKNLIKEAD-ILINTTTVGMYPAVDDTIATADMMHPDLTVFDIVYNPLETKL 223
Query: 472 LREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRKLVLE 516
L+EA + G+ ++GV M + Q F ++T P + M++ VLE
Sbjct: 224 LKEAKKAGSNAINGVMMLVYQGAEAFEIWTDIRPPVNIMKQAVLE 268
>gi|319651634|ref|ZP_08005761.1| shikimate 5-dehydrogenase [Bacillus sp. 2_A_57_CT2]
gi|317396701|gb|EFV77412.1| shikimate 5-dehydrogenase [Bacillus sp. 2_A_57_CT2]
Length = 279
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 96/289 (33%), Positives = 147/289 (50%), Gaps = 25/289 (8%)
Query: 238 KIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLV--DDVKEFFRTYSGTDFAGFSVG 295
K+FG++ +P+ HS P +HN F + Y + +++ + + AGF+V
Sbjct: 3 KLFGVIGDPISHSMSPAMHNDLFAAYSLDAHYQAFHISRENLTDAIIGFRAMGIAGFNVT 62
Query: 296 IPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALRERQGI 355
+PHKE + DE+ PLA++IGAVNT++ + GKL+GYNTD + + L ++Q I
Sbjct: 63 VPHKEAIIPLLDELDPLAEAIGAVNTVVNQ--TGKLIGYNTDGSGYVKGL---LNQKQSI 117
Query: 356 NGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGARVI-IFNRNYERAKALAD----AV 410
K ++VGAGGA RA+ F G ++ I NR +RA+ + + V
Sbjct: 118 KD----------KKVLIVGAGGAARAIYFTIAKEGPELLDICNRTPKRAEQIINDCPFRV 167
Query: 411 SGEALHFEYLHEFFPEKGMILANASAIGMEPNSDQSPVPKEALKAYELVFDAVYTPRNTR 470
L +I+ S IGM P QSP+ LK V D +Y P T+
Sbjct: 168 PARVLSRPDAEGSLETYDLIVQTTS-IGMHPEIGQSPLSVHKLKPGAFVSDIIYNPLETK 226
Query: 471 LLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPE-DFMRKLVLEQF 518
LL EAAE GA + +G++MF+ Q F ++T G+ P+ + MR VL Q
Sbjct: 227 LLTEAAEKGAGIQNGIDMFVYQGALAFEMWT-GIGPDIERMRHKVLNQL 274
>gi|75909313|ref|YP_323609.1| shikimate 5-dehydrogenase [Anabaena variabilis ATCC 29413]
gi|123609023|sp|Q3M8H2.1|AROE_ANAVT RecName: Full=Shikimate dehydrogenase
gi|75703038|gb|ABA22714.1| shikimate dehydrogenase [Anabaena variabilis ATCC 29413]
Length = 289
Score = 143 bits (360), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 84/294 (28%), Positives = 149/294 (50%), Gaps = 29/294 (9%)
Query: 233 INPDTKIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLV--DDVKEFFRTYSGTDFA 290
I TK+ G++ +PV HS P++HN A + +Y+P + D+++ +
Sbjct: 2 ITGKTKLLGVIGHPVEHSLSPVMHNAAIAQLGLDYVYLPFPIAPDNLEAAIALLATIGVV 61
Query: 291 GFSVGIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALR 350
GFSV IPHK+ + E+ P+A++IGAVNT+ R+ + + VG NTD E I+ ++ +
Sbjct: 62 GFSVTIPHKQAIIPLLAEISPVAQAIGAVNTVTRQ--NNQWVGTNTDIEGFIAPLQTTYK 119
Query: 351 ERQGINGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRG-ARVIIFNRNYERAKALADA 409
+ +I V++G GGA RA+ G G A + + RN +R + +
Sbjct: 120 RDW------------SQQIAVILGNGGAARAVVAGCYQLGFAEIHVVGRNVQRLEEFRHS 167
Query: 410 VSGEAL-------HFEYLHEFFPEKGMILANASAIGMEPNSDQSPVPKEALKAYE---LV 459
+ ++YL + P+ + L N + IGM P D+SP+ E L + +
Sbjct: 168 WDNSPIAENLQVHTWDYLAKLVPQANL-LVNTTPIGMYPQVDESPLSTEELANLQTGAIA 226
Query: 460 FDAVYTPRNTRLLREAAEVGATVVSGVEMFIRQALGQFRLF-TGGLAPEDFMRK 512
+D +Y P+ T+ L++A + GA + G+EM ++Q + +++ P D MR+
Sbjct: 227 YDLIYIPKPTQFLQKAQQQGAIAIDGLEMLVQQGVAALKIWLQQDDIPVDVMRQ 280
>gi|312137431|ref|YP_004004768.1| shikimate dehydrogenase [Methanothermus fervidus DSM 2088]
gi|311225150|gb|ADP78006.1| shikimate dehydrogenase [Methanothermus fervidus DSM 2088]
Length = 281
Score = 142 bits (359), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 102/296 (34%), Positives = 158/296 (53%), Gaps = 27/296 (9%)
Query: 233 INPDTKIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLV--DDVKEFFRTYSGTDFA 290
I TK+ G++ +PV HS P++HN AF + + +YVP V +++K+ + +
Sbjct: 2 ITGKTKVVGVIGDPVEHSLSPVMHNAAFEYYGLDYVYVPFHVKKENLKDAIKGSKALNIK 61
Query: 291 GFSVGIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALR 350
G +V IPHK + D + AK IGA+NTI + D + G+NTD + A+ A+++
Sbjct: 62 GLNVTIPHKRNVIKYLDWIDDAAKLIGAINTI--KFEDDGIKGFNTDGKGAVMALKEV-- 117
Query: 351 ERQGINGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGARVI-IFNRNYERAKALAD- 408
+ I K +++GAGGA RA+AF GA+ I I NR E+A+ LA
Sbjct: 118 ------------TEIKNKKILILGAGGAARAVAFQLALEGAKNICILNRTVEKAEELAKD 165
Query: 409 -----AVSGEALHFEYLHEFFPEKGMILANASAIGMEPNSDQSPVPK-EALKAYELVFDA 462
V + E + + + IL +A+ +GM PN +Q P+ K E + +V D
Sbjct: 166 INKKTGVKTNSGSLELIEKEIKDTD-ILIDATPVGMYPNVNQEPLVKAEMMHENLIVNDL 224
Query: 463 VYTPRNTRLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRKLVLEQF 518
VY P T LL+EA + GA +SGVEM + Q F+++TG AP D MR+ VL++
Sbjct: 225 VYNPIKTTLLKEAEKAGAKTISGVEMLVYQGAEAFKIWTGMEAPIDVMRQSVLKEL 280
>gi|427736701|ref|YP_007056245.1| shikimate dehydrogenase [Rivularia sp. PCC 7116]
gi|427371742|gb|AFY55698.1| shikimate dehydrogenase [Rivularia sp. PCC 7116]
Length = 290
Score = 142 bits (359), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 85/303 (28%), Positives = 148/303 (48%), Gaps = 33/303 (10%)
Query: 233 INPDTKIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLVD--DVKEFFRTYSGTDFA 290
I +TK+ G++ +PV HS P++HN A R + +Y+P ++ ++ ++
Sbjct: 2 ITGNTKLLGVIGHPVEHSLSPLMHNAALEKLRLDYVYLPFPIEPQNLATALDGFAAIGVV 61
Query: 291 GFSVGIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALR 350
GF+ IPHK+ V + P+A+++GAVNT++R+ D K +G NTD E I+ ++ R
Sbjct: 62 GFNATIPHKQAIVPKLSNIEPIARAVGAVNTVVRK--DDKWIGTNTDVEGFIAPLQSLDR 119
Query: 351 ERQGINGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRG-ARVIIFNRNYERAKALADA 409
+ N +++G GGA RA+ G G A V + RN ++ + D+
Sbjct: 120 DWSQTNA-------------LVLGNGGAARAVVAGCTQLGCASVRVVGRNLQKLEEFRDS 166
Query: 410 VSGEAL----------HFEYLHEFFPEKGMILANASAIGMEPNSDQSPVPKEA---LKAY 456
L + Y+ E E +++ N + IGM P D SP+ + L
Sbjct: 167 WQDSPLSPLKVNVQVHEWGYIPEIIKEANLLI-NTTPIGMYPKIDNSPINADLFLHLPKD 225
Query: 457 ELVFDAVYTPRNTRLLREAAEVGATVVSGVEMFIRQALGQFRLFTGG-LAPEDFMRKLVL 515
+V+D +YTP T+ L+ A + T + G+EM ++Q +++ P D MRK +
Sbjct: 226 TIVYDLIYTPSPTKFLQYAQQADKTAIDGLEMLVQQGAAALKIWLRRETVPVDVMRKTLQ 285
Query: 516 EQF 518
+Q
Sbjct: 286 QQL 288
>gi|427727930|ref|YP_007074167.1| shikimate 5-dehydrogenase [Nostoc sp. PCC 7524]
gi|427363849|gb|AFY46570.1| shikimate 5-dehydrogenase [Nostoc sp. PCC 7524]
Length = 292
Score = 142 bits (359), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 87/290 (30%), Positives = 147/290 (50%), Gaps = 29/290 (10%)
Query: 237 TKIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLV--DDVKEFFRTYSGTDFAGFSV 294
TK+ G++ +PV HS P++HN A + IY+P + ++++ + D GFSV
Sbjct: 6 TKLLGVIGHPVEHSLSPVMHNAAIAQLGLDYIYLPFPIKPENLEVAIAGLAAIDVVGFSV 65
Query: 295 GIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALRERQG 354
IPHK+ + E+ P+A++IGAVNT+ R + + VG NTD E IS ++ ++
Sbjct: 66 TIPHKQAIIPLLAEISPIAQAIGAVNTVTRH--NNQWVGTNTDIEGFISPLQTTYQQDW- 122
Query: 355 INGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRG-ARVIIFNRNYERAKALADAVSGE 413
+ K V++G GGA RA+ G G A + + RN +R K +
Sbjct: 123 -----------SQKTAVILGNGGAARAVVAGCYQLGFAEIHVIGRNPQRLKEFQHSWESS 171
Query: 414 ALH-------FEYLHEFFPEKGMILANASAIGMEPNSDQSPVPKEA---LKAYELVFDAV 463
+ ++ L + PE + L N + IGM P+ D+SPV E L+ + +D +
Sbjct: 172 PIADNLQVHPWDNLAKLIPEANL-LVNTTPIGMYPHVDESPVSVEEMANLQTGAIAYDLI 230
Query: 464 YTPRNTRLLREAAEVGATVVSGVEMFIRQALGQFRLFTG-GLAPEDFMRK 512
Y P+ T+ L+ A + GA + G+EM ++Q + +++ P D MR+
Sbjct: 231 YIPQPTKFLQYAQQQGAIAIDGLEMLVQQGVAALKIWLQRETLPVDVMRQ 280
>gi|289432356|ref|YP_003462229.1| shikimate 5-dehydrogenase [Dehalococcoides sp. GT]
gi|452203313|ref|YP_007483446.1| shikimate 5-dehydrogenase [Dehalococcoides mccartyi DCMB5]
gi|288946076|gb|ADC73773.1| shikimate 5-dehydrogenase [Dehalococcoides sp. GT]
gi|452110372|gb|AGG06104.1| shikimate 5-dehydrogenase [Dehalococcoides mccartyi DCMB5]
Length = 286
Score = 142 bits (359), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 94/288 (32%), Positives = 143/288 (49%), Gaps = 27/288 (9%)
Query: 235 PDTKIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLV--DDVKEFFRTYSGTDFAGF 292
PD +FG++ PV HS P + N AF+H + N +Y+ + +D++ + + G
Sbjct: 5 PDA-LFGIIGYPVSHSVSPAMQNAAFKHCKLNYLYLTIAAKPEDLQNVIASMRPLNIRGL 63
Query: 293 SVGIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALRER 352
+V IPHK + D + P AK IGAVNTI+ +G+L GYNTD + +E
Sbjct: 64 NVTIPHKIEVIKYIDTLDPAAKKIGAVNTIVNE--NGQLKGYNTDFGGFVRLLEH----- 116
Query: 353 QGINGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGARVIIFNRNYERAKALADAV-- 410
N +A A F L+GAGG+ A++ + G + + R E+AK LA +
Sbjct: 117 ---NRIAP-----AKHRFALLGAGGSAHAISLAICTLGGHLTVLARQEEKAKDLAAKMCL 168
Query: 411 ------SGEALHFEYLHEFFPEKGMILANASAIGMEPNSDQSPVPKEALKAYELVFDAVY 464
G L+ L E E +I+ N + IGM + QS +P L+ V DA+Y
Sbjct: 169 RFKGKAQGLELNEANLEETLAESNIIV-NCTPIGMGNLAGQSLIPPRLLRPDLTVIDAIY 227
Query: 465 TPRNTRLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRK 512
P TRLL +A + GA +++G+EM + Q F ++T AP M K
Sbjct: 228 NPCKTRLLEDAEKKGAKIINGLEMLVWQGAMSFEIWTSQKAPFRVMMK 275
>gi|428280059|ref|YP_005561794.1| shikimate 5-dehydrogenase [Bacillus subtilis subsp. natto BEST195]
gi|291485016|dbj|BAI86091.1| shikimate 5-dehydrogenase [Bacillus subtilis subsp. natto BEST195]
Length = 280
Score = 142 bits (358), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 96/286 (33%), Positives = 149/286 (52%), Gaps = 24/286 (8%)
Query: 238 KIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLV--DDVKEFFRTYSGTDFAGFSVG 295
K++G++ NP+GHS P +HN + + +G Y V DD+++ + G +V
Sbjct: 3 KLYGVIGNPIGHSMSPDIHNASLKDLGLDGHYHAFKVEEDDLEDAVKGIRALGVQGINVT 62
Query: 296 IPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALRERQGI 355
+PHK + D + AK IGAVNT+ RR D KLVGYNTD E + ++ L +
Sbjct: 63 VPHKVSIMDYLDHIDESAKVIGAVNTV-RREGD-KLVGYNTDGEGFVKSLMKVLDK---- 116
Query: 356 NGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGA--RVIIFNRNYERAKALADAV--- 410
PI+ F+++GAGGA RA+ F R + I NR E+AK L +A
Sbjct: 117 --------PISELSFLMIGAGGAARAI-FTTIVRNTPKKFDICNRTLEKAKRLTEATPSF 167
Query: 411 -SGEALHFEYLHEFFPEKGMILANASAIGMEPNSDQSPVPKEALKAYELVFDAVYTPRNT 469
+ E L + E + +I+ + +++GM PN D P+ + + +V D VY P T
Sbjct: 168 HNKEVLSIKEAEERLEQYDVII-HTTSVGMYPNVDDVPLSLQRAASSAVVCDIVYNPIQT 226
Query: 470 RLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRKLVL 515
LL+EA++ G + GV MF+ QA F+L+TG + MR +V+
Sbjct: 227 ALLKEASQKGLKTLDGVGMFVEQAALSFQLWTGQEPDIEKMRSIVI 272
>gi|257866088|ref|ZP_05645741.1| shikimate 5-dehydrogenase [Enterococcus casseliflavus EC30]
gi|257872419|ref|ZP_05652072.1| shikimate 5-dehydrogenase [Enterococcus casseliflavus EC10]
gi|257800022|gb|EEV29074.1| shikimate 5-dehydrogenase [Enterococcus casseliflavus EC30]
gi|257806583|gb|EEV35405.1| shikimate 5-dehydrogenase [Enterococcus casseliflavus EC10]
Length = 286
Score = 142 bits (358), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 91/297 (30%), Positives = 147/297 (49%), Gaps = 30/297 (10%)
Query: 233 INPDTKIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLV--DDVKEFFRTYSGTDFA 290
I T++ L + P HS P +HN +F + +Y+ V DD+ ++ D
Sbjct: 2 ITGHTRLAALFAKPAKHSISPAMHNLSFEEQGTDAVYLAFDVEPDDLAASIQSIRQLDLL 61
Query: 291 GFSVGIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALR 350
G ++ +PHK AVA DE P A+ IGA+NTI+ + +G+L+G+NTD + A+ED
Sbjct: 62 GVNLSMPHKMAAVALMDECSPAAELIGAINTIVNQ--EGRLIGHNTDGIGFMRALEDI-- 117
Query: 351 ERQGINGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGARVI-IFNRNYER------- 402
I G ++GAGGA A+ A G + I +FNR E
Sbjct: 118 -----------QVSILGDTMTVIGAGGAATAIISQAALDGVKTIHVFNRKDEFYPIIQEK 166
Query: 403 ----AKALADAVSGEALHFEYLHEFFPEKGMILANASAIGMEPNSDQSPVPKEALKAYEL 458
A+ A ++ L + + ++ +L NA+ +GM+PN +SP+ + L L
Sbjct: 167 LTQIAQKTACEITLTDLEDQMALKTAIDQSSLLVNATGVGMKPNDTESPLKDKTLLRESL 226
Query: 459 -VFDAVYTPRNTRLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRKLV 514
V+D +Y PR T+LL++A VGA +G+ M + Q F L+TG P + ++ L+
Sbjct: 227 AVYDVIYNPRETQLLKDAKAVGAKTANGLSMLLYQGAAAFELWTGKAMPVEKVKALI 283
>gi|392941090|ref|ZP_10306734.1| shikimate 5-dehydrogenase [Thermoanaerobacter siderophilus SR4]
gi|392292840|gb|EIW01284.1| shikimate 5-dehydrogenase [Thermoanaerobacter siderophilus SR4]
Length = 292
Score = 142 bits (358), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 96/290 (33%), Positives = 148/290 (51%), Gaps = 28/290 (9%)
Query: 233 INPDTKIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVP--MLVDDVKEFFRTYSGTDFA 290
IN +TK++GL+ +PV HS P++HN AF N +Y +L + +++ +
Sbjct: 11 INANTKLYGLIGHPVEHSLSPLIHNYAFNSLDLNCVYTAFDVLPEKLEDAVKGAKALGIK 70
Query: 291 GFSVGIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALR 350
GF+V +PHKE + D V A IGAVNT++ G L GYNTD I ++ +
Sbjct: 71 GFNVTVPHKEKIIKYLDVVSEEALKIGAVNTVVNE--GGILKGYNTDVYGFIDSLTEV-- 126
Query: 351 ERQGINGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGA-RVIIFNRNYERAKALADA 409
I G+ V++GAGGA +A+ +G +II NR+ ERAK L++
Sbjct: 127 -----------GEKIEGRKAVVLGAGGASKAVCVALALKGIDSIIIANRSVERAKDLSEY 175
Query: 410 VSGE-ALHFEYLH----EFFPEKGMILANASAIGMEPNSDQSPVPKEALKAYELVFDAVY 464
+ E + +Y E PE M L N +++GM PN + SPV + + + V+D +Y
Sbjct: 176 IKREFKIQCDYCSINEVEEIPEIDM-LVNTTSMGMYPNVEDSPVSERVVSKAKFVYDLIY 234
Query: 465 TPRNTRLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRKLV 514
P T L+ A + G +G+ M + QA F+L+TG E F + LV
Sbjct: 235 NPFETTFLKHAKKNGIKYSNGLFMLLNQANYSFKLWTG----EFFDKNLV 280
>gi|167043755|gb|ABZ08447.1| putative Shikimate / quinate 5-dehydrogenase [uncultured marine
crenarchaeote HF4000_APKG3B16]
Length = 273
Score = 142 bits (358), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 89/284 (31%), Positives = 147/284 (51%), Gaps = 26/284 (9%)
Query: 240 FGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLV--DDVKEFFRTYSGTDFAGFSVGIP 297
+ ++ +P+ HS P +HN AFRH + + Y+ + ++ AGF+V IP
Sbjct: 5 YAVIGDPIDHSLSPNIHNAAFRHLKLDHTYIAYKIPAGELSAGIEALKAIKIAGFNVTIP 64
Query: 298 HKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALRERQGING 357
HK + DE+ K IGAVNT++ DGKL GYNTD + D ++++
Sbjct: 65 HKIEMMKFLDEMDTTCKIIGAVNTVLNE--DGKLKGYNTD----MIGFLDPIKKKN---- 114
Query: 358 VASHTSPIAGKIFVLVGAGGAGRALAFG-AKSRGARVIIFNRNYERAKALAD---AVSGE 413
I +L+GAGGA RA+ K + +++ I NR E A LA+ + G
Sbjct: 115 -----LTIKDSQVLLLGAGGAARAIVTAMVKEKASKITIVNRTMENANKLAEFAKKIGGN 169
Query: 414 A--LHFEYLHEFFPEKGMILANASAIGMEPNSDQSPVPKEALKAYELVFDAVYTPRNTRL 471
A + + ++ + I+ N+++IGM ++ SP+ E + +V+D VY P NT L
Sbjct: 170 ADTVSIQEANKLIADYKFII-NSTSIGMR--NEPSPISTENISKDSIVYDIVYQPINTDL 226
Query: 472 LREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRKLVL 515
++++ E GAT++ G EM + QA F ++ AP D M+K++L
Sbjct: 227 IKKSKENGATIIYGYEMLLSQAACSFEIWHKMEAPYDVMKKMLL 270
>gi|402300002|ref|ZP_10819555.1| shikimate 5-dehydrogenase [Bacillus alcalophilus ATCC 27647]
gi|401724793|gb|EJS98122.1| shikimate 5-dehydrogenase [Bacillus alcalophilus ATCC 27647]
Length = 282
Score = 142 bits (358), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 95/288 (32%), Positives = 142/288 (49%), Gaps = 22/288 (7%)
Query: 238 KIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLV--DDVKEFFRTYSGTDFAGFSVG 295
K++GL PVGHS PI+H AF+ Y V D ++E + G +V
Sbjct: 3 KVYGLFGYPVGHSMSPIMHEAAFKELGQKANYHAFNVKPDKIEEAVMAIRALELGGCNVT 62
Query: 296 IPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALRERQGI 355
IPHK + DE+ P A IGAVNTI+ + GKL G+NTD + ++ +
Sbjct: 63 IPHKVNVMNYLDEIDPEAAEIGAVNTIVNQ--GGKLKGFNTDGRGYLQSLLEI------- 113
Query: 356 NGVASHTSPIAGKIFVLVGAGGAGRAL-AFGAKSRGARVIIFNRNYERAKALADAVSGEA 414
+HT + GK ++GAGGA RA+ +R+++ NR +A+ L + +A
Sbjct: 114 ----AHT--LEGKSVAIIGAGGAARAIVTVLVHESVSRLVVANRTKIKAEQLIERHKSKA 167
Query: 415 LHFEYLH----EFFPEKGMILANASAIGMEPNSDQSPVPKEALKAYELVFDAVYTPRNTR 470
+ E+ I+ N +++GM PN+D+ P+ LK +V D +Y P T+
Sbjct: 168 TELGVMDMRELEYELASFDIIINTTSVGMSPNTDECPLSLNNLKKETIVSDLIYNPLKTK 227
Query: 471 LLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRKLVLEQF 518
LL EA GA V++GV MF+ Q F +TG M K+VLEQ
Sbjct: 228 LLIEAESRGAKVLNGVGMFVNQGALSFEYWTGLKPDRKVMTKIVLEQL 275
>gi|73748307|ref|YP_307546.1| shikimate 5-dehydrogenase [Dehalococcoides sp. CBDB1]
gi|123620202|sp|Q3ZZN3.1|AROE_DEHSC RecName: Full=Shikimate dehydrogenase
gi|73660023|emb|CAI82630.1| shikimate 5-dehydrogenase [Dehalococcoides sp. CBDB1]
Length = 286
Score = 142 bits (357), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 94/288 (32%), Positives = 143/288 (49%), Gaps = 27/288 (9%)
Query: 235 PDTKIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLV--DDVKEFFRTYSGTDFAGF 292
PD +FG++ PV HS P + N AF+H + N +Y+ + +D++ + + G
Sbjct: 5 PDA-LFGIIGYPVSHSVSPAMQNAAFKHCKLNYLYLTIAAKPEDLQNVIASMRPLNIRGL 63
Query: 293 SVGIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALRER 352
+V IPHK + D + P AK IGAVNTI+ +G+L GYNTD + +E
Sbjct: 64 NVTIPHKIEVIKYIDTLDPAAKKIGAVNTIVNE--NGQLKGYNTDFGGFVRLLEH----- 116
Query: 353 QGINGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGARVIIFNRNYERAKALADAV-- 410
N +A A F L+GAGG+ A++ + G + + R E+AK LA +
Sbjct: 117 ---NRIAP-----AKHRFALLGAGGSAHAISLAICTLGGHLTVLARQEEKAKDLAAKMCL 168
Query: 411 ------SGEALHFEYLHEFFPEKGMILANASAIGMEPNSDQSPVPKEALKAYELVFDAVY 464
G L+ L E E +I+ N + IGM + QS +P L+ V DA+Y
Sbjct: 169 RFKGKAQGLELNEANLEETLAESDIIV-NCTPIGMGNLAGQSLIPPRLLRPDLTVIDAIY 227
Query: 465 TPRNTRLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRK 512
P TRLL +A + GA +++G+EM + Q F ++T AP M K
Sbjct: 228 NPCKTRLLEDAEKKGAKIINGLEMLVWQGAMSFEIWTSQKAPFRVMMK 275
>gi|149183163|ref|ZP_01861612.1| shikimate 5-dehydrogenase [Bacillus sp. SG-1]
gi|148849146|gb|EDL63347.1| shikimate 5-dehydrogenase [Bacillus sp. SG-1]
Length = 277
Score = 142 bits (357), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 84/287 (29%), Positives = 148/287 (51%), Gaps = 22/287 (7%)
Query: 239 IFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLV--DDVKEFFRTYSGTDFAGFSVGI 296
++G++ NP+GHS P++HN AF+ + Y P LV +D+++ + GF+V I
Sbjct: 4 LYGVIGNPIGHSMSPLMHNDAFQEKGIDSHYQPFLVKSEDIEKAVKALKVLGVQGFNVTI 63
Query: 297 PHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALRERQGIN 356
PHK + DEV PLA++IGAVNT++R+ + +G+NTD I ++E+
Sbjct: 64 PHKRAIMPLLDEVDPLAEAIGAVNTVVRK--GDRFIGFNTDGMGFIRSLEE--------- 112
Query: 357 GVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGARVI-IFNRNYERAKALAD----AVS 411
S P+ K +++GAGGA RA+ + + G + I I NR E+ + + +
Sbjct: 113 ---SCPFPLDNKAVLIIGAGGAARAIFYSMAASGIKNIDICNRTPEKGEDIIKDCPFPCT 169
Query: 412 GEALHFEYLHEFFPEKGMILANASAIGMEPNSDQSPVPKEALKAYELVFDAVYTPRNTRL 471
+L + + E I+ +++GM P ++ P+ +K + D +Y P T++
Sbjct: 170 SASLSLQQAEQSM-ELYDIIVQTTSVGMHPETNAMPLNVTRIKEGAFISDIIYNPLETKI 228
Query: 472 LREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRKLVLEQF 518
++ +G +G+ MF+ Q F L+TG + D MR +V +Q
Sbjct: 229 MKTFCALGGKGDNGIGMFVHQGALAFELWTGIIPDSDRMRNIVQQQL 275
>gi|448318951|ref|ZP_21508461.1| shikimate 5-dehydrogenase [Natronococcus jeotgali DSM 18795]
gi|445597479|gb|ELY51554.1| shikimate 5-dehydrogenase [Natronococcus jeotgali DSM 18795]
Length = 266
Score = 142 bits (357), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 101/278 (36%), Positives = 134/278 (48%), Gaps = 22/278 (7%)
Query: 238 KIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPM--LVDDVKEFFRTYSGTDFAGFSVG 295
++GL+ NPVGHS P +H A+ YV D+++ R G +V
Sbjct: 2 DVYGLLGNPVGHSLSPPMHEAAYDELALEARYVTFEPAPDELEAAIRGAGALGIRGLNVT 61
Query: 296 IPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALRERQGI 355
IP K + E LA IGA NTI + G+NTD A+ A+ D
Sbjct: 62 IPFKRDVLEFV-EPDELASRIGAANTIDFS--GAEPTGHNTDAAGALRALRD-------- 110
Query: 356 NGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGARVIIFNRNYERAKALADAVSG-EA 414
H + G ++VGAGGAGRA++FG GA V I NR A+ LA V G +
Sbjct: 111 -----HGVALEGADALVVGAGGAGRAISFGLADAGAAVTIANRTASTARELAAEVPGADG 165
Query: 415 LHFEYLHEFFPEKGMILANASAIGMEPNSDQSPVPKEALKAYELVFDAVYTPRNTRLLRE 474
E L + + +L NA+++GME D +PVP E L V DAVY P TRLLR+
Sbjct: 166 RGLEDLEDAV-DDADVLVNATSVGME--EDATPVPSEVLHGELAVLDAVYRPLETRLLRD 222
Query: 475 AAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRK 512
AA GAT V G M + Q + F L+T AP D M +
Sbjct: 223 AAAAGATTVDGAWMLLYQGVEAFELWTDRTAPVDEMNE 260
>gi|186684355|ref|YP_001867551.1| shikimate 5-dehydrogenase [Nostoc punctiforme PCC 73102]
gi|186466807|gb|ACC82608.1| shikimate 5-dehydrogenase [Nostoc punctiforme PCC 73102]
Length = 295
Score = 142 bits (357), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 87/300 (29%), Positives = 152/300 (50%), Gaps = 29/300 (9%)
Query: 233 INPDTKIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLV--DDVKEFFRTYSGTDFA 290
I TK+ G++ +PV HS P +HN A + + +Y+P + ++++ ++
Sbjct: 7 ITGKTKLLGVIGHPVEHSLSPAMHNAAIANLGLDYVYLPFPIAPENLEVAIAGFAVIGVV 66
Query: 291 GFSVGIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALR 350
GFSV IPHK+ + E+ PLA+ IGAVNT+ R+ + + VG NTD E I+ ++ +
Sbjct: 67 GFSVTIPHKQAIMPLLSEITPLAQMIGAVNTVSRQ--NNQWVGTNTDIEGFIAPLQTTYK 124
Query: 351 ERQGINGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRG-ARVIIFNRNYERAKALADA 409
+ + K+ V++G GGA RA+ G G A++ + RN +R + D+
Sbjct: 125 QDW------------SQKVAVILGNGGAARAVVAGCHQLGFAKIHVVGRNVQRLQEFRDS 172
Query: 410 VSGEAL-------HFEYLHEFFPEKGMILANASAIGMEPNSDQSPVPKEA---LKAYELV 459
S + +E L + P+ + L N + IGM P D+SP+ E L +
Sbjct: 173 WSNSPISENLQVHQWEELSKLIPQANL-LVNTTPIGMYPKVDESPLSIEEIANLPTGAIA 231
Query: 460 FDAVYTPRNTRLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGL-APEDFMRKLVLEQF 518
+D +Y P+ T+ L A + GA + G+EM ++Q + +++ P + MR+ +L Q
Sbjct: 232 YDLIYIPKPTQFLELAQKQGAIAIDGLEMLVQQGVAALKIWLQQENIPVEVMRQALLNQL 291
>gi|334137627|ref|ZP_08511056.1| shikimate dehydrogenase [Paenibacillus sp. HGF7]
gi|333604791|gb|EGL16176.1| shikimate dehydrogenase [Paenibacillus sp. HGF7]
Length = 289
Score = 142 bits (357), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 98/295 (33%), Positives = 150/295 (50%), Gaps = 24/295 (8%)
Query: 233 INPDTKIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVP--MLVDDVKEFFRTYSGTDFA 290
++ T ++G+ +PV HS+ PI+ N AF NG Y +L + ++E F
Sbjct: 7 LDSGTILYGVFGDPVRHSRSPIMMNRAFGEAGINGAYAAFHVLPEQLEEAVAGIRALGFG 66
Query: 291 GFSVGIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALR 350
G +V IPHK + DE+ A+++GAVNT++ R GKL+GYNTD + + L+
Sbjct: 67 GVNVTIPHKVNVMKYLDEIDADAQALGAVNTVVNR--GGKLIGYNTDGIGYVRS----LK 120
Query: 351 ERQGINGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGARVI-IFNRNYERAKALADA 409
E G++ + GK +L+GAGGA R +++ G I I NR E+A+ LA
Sbjct: 121 EETGMD--------LRGKKVLLIGAGGAARGISYALAKEGPSFIAIANRTAEKAQELAST 172
Query: 410 VSGE----ALHFEYLHEFFPEKGMILANASAIGMEPNSDQSPVPKEA--LKAYELVFDAV 463
V E + L + +I+ N+++ GM PN ++ P+ + L+ +V D V
Sbjct: 173 VRAETSAVGMGLHELGNIISDADLII-NSTSSGMYPNIEEMPLDLDGHRLREGAVVSDLV 231
Query: 464 YTPRNTRLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRKLVLEQF 518
Y P TR L+EA GA G+ MFI Q F +TG AP MR+ V + F
Sbjct: 232 YNPLETRFLKEAKARGAVTHGGLGMFIYQGAYAFEYWTGVPAPAAAMRQAVEQSF 286
>gi|345017564|ref|YP_004819917.1| shikimate dehydrogenase [Thermoanaerobacter wiegelii Rt8.B1]
gi|344032907|gb|AEM78633.1| Shikimate dehydrogenase [Thermoanaerobacter wiegelii Rt8.B1]
Length = 292
Score = 142 bits (357), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 96/290 (33%), Positives = 152/290 (52%), Gaps = 28/290 (9%)
Query: 233 INPDTKIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYV--PMLVDDVKEFFRTYSGTDFA 290
IN +TK++GL+ +PV HS P++HN AF+ N +Y +L + ++E +
Sbjct: 11 INANTKLYGLIGHPVEHSLSPLIHNYAFKSLNLNCVYTVFDVLPEKLEEAVKGVKALGIR 70
Query: 291 GFSVGIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALR 350
G +V +PHKE + D V A IGAVNT++ G L GYNTD I ++ +
Sbjct: 71 GVNVTVPHKEKIIKYLDVVSEEALKIGAVNTVVNE--GGILKGYNTDVYGFIDSLTEV-- 126
Query: 351 ERQGINGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGA-RVIIFNRNYERAKALADA 409
I G+ V++GAGGA +A+ +G +II NR+ ERAK L++
Sbjct: 127 -----------GEKIEGRKAVVLGAGGASKAVCVALALKGIDSIIIANRSVERAKDLSEY 175
Query: 410 VSGE-ALHFEY--LHEF--FPEKGMILANASAIGMEPNSDQSPVPKEALKAYELVFDAVY 464
+ E + +Y ++E PE IL N +++GM PN++ SP ++ + + V+D +Y
Sbjct: 176 IKREFKIQCDYCSINEVKELPEID-ILVNTTSVGMYPNTEDSPADEKVVLKAKFVYDLIY 234
Query: 465 TPRNTRLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRKLV 514
P T LL+ A + G +G+ M + QA F+L+TG E F + LV
Sbjct: 235 NPFETALLKHAKKNGIKYSNGLFMLLNQANYSFKLWTG----EFFDKNLV 280
>gi|56963403|ref|YP_175134.1| shikimate 5-dehydrogenase [Bacillus clausii KSM-K16]
gi|81600933|sp|Q5WHI2.1|AROE_BACSK RecName: Full=Shikimate dehydrogenase
gi|56909646|dbj|BAD64173.1| shikimate 5-dehydrogenase [Bacillus clausii KSM-K16]
Length = 275
Score = 141 bits (356), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 83/282 (29%), Positives = 146/282 (51%), Gaps = 17/282 (6%)
Query: 237 TKIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLV--DDVKEFFRTYSGTDFAGFSV 294
T+ FGL+ +P+GHSK P++H A++ + +Y + ++ RT GF+V
Sbjct: 2 TRQFGLIGHPLGHSKSPVMHEAAYKDMGLDAVYCAYDISPQELGNAIRTMKAQGIDGFNV 61
Query: 295 GIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALRERQG 354
IPHK + DE+ A+++GAVNT++ + DG+ VG NTD + I ++ + ++
Sbjct: 62 TIPHKVAIIDYLDEIDEDAEAMGAVNTVVCQ--DGRWVGKNTDADGYIESLLPVVSDQS- 118
Query: 355 INGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGARVIIFNRNYERAKALADAVSGEA 414
+ G+ +++GAGGA RA+ + A + + NR E+A+ LA S
Sbjct: 119 ----------LTGRRVLVIGAGGAARAVIHALGKQRATISVSNRTAEKAQELAQLFSHLT 168
Query: 415 LHFEYLHEFFPEKGM--ILANASAIGMEPNSDQSPVPKEALKAYELVFDAVYTPRNTRLL 472
+ L+E G +L N +++GM P++ + P+ + LK +V D +Y P T LL
Sbjct: 169 IEAIPLNEAESTLGTYDVLINTTSVGMYPDTSKQPIALDRLKQATIVSDLIYNPYETALL 228
Query: 473 REAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRKLV 514
+EA + G +++G+ MF+ Q +TG M ++V
Sbjct: 229 QEAKQRGNRILNGIGMFVNQGALSIEHWTGRKPNRKCMERVV 270
>gi|119511936|ref|ZP_01631034.1| shikimate 5-dehydrogenase [Nodularia spumigena CCY9414]
gi|119463432|gb|EAW44371.1| shikimate 5-dehydrogenase [Nodularia spumigena CCY9414]
Length = 294
Score = 141 bits (356), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 84/294 (28%), Positives = 153/294 (52%), Gaps = 29/294 (9%)
Query: 233 INPDTKIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLV--DDVKEFFRTYSGTDFA 290
I T++ G++ +PV HS P++HN A + IY+P + ++++ + +
Sbjct: 6 ITGKTQLLGVIGHPVEHSLSPVMHNAALAQLGLDYIYLPFPIKPENLEVAIAGLAAINVV 65
Query: 291 GFSVGIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALR 350
GFSV IPHK+ + E+ P A++IGAVNT+ R+ + + VG NTD E I+ ++ +
Sbjct: 66 GFSVTIPHKQAIMPLLSEISPTAQAIGAVNTVSRQ--NNQWVGTNTDIEGFIAPLQTTYQ 123
Query: 351 ERQGINGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRG-ARVIIFNRNYERAKALADA 409
+ + KI V++G GGA RA+ G + G A++ + RN ++ A ++
Sbjct: 124 QDW------------SQKIAVILGHGGAARAVVAGCQQLGFAQIHVVGRNMQKLTAFGNS 171
Query: 410 VSGEALH-------FEYLHEFFPEKGMILANASAIGMEPNSDQSPVP---KEALKAYELV 459
L ++ L + P+ + L N + +GM P ++SPV + L + +
Sbjct: 172 WGSSPLAEKLQVHIWDDLAKLIPQANL-LVNTTPVGMYPLVNESPVSLADMQKLSSGAIA 230
Query: 460 FDAVYTPRNTRLLREAAEVGATVVSGVEMFIRQALGQFRLFTGG-LAPEDFMRK 512
+D +YTP T+ L++A + GA V+ G+EM ++Q + +++ P D MR+
Sbjct: 231 YDLIYTPNPTQFLQQAQKHGAIVIDGLEMLVQQGVAALKIWLQQETLPVDVMRQ 284
>gi|443631865|ref|ZP_21116045.1| shikimate 5-dehydrogenase [Bacillus subtilis subsp. inaquosorum
KCTC 13429]
gi|443347980|gb|ELS62037.1| shikimate 5-dehydrogenase [Bacillus subtilis subsp. inaquosorum
KCTC 13429]
Length = 280
Score = 141 bits (356), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 95/289 (32%), Positives = 150/289 (51%), Gaps = 24/289 (8%)
Query: 238 KIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLV--DDVKEFFRTYSGTDFAGFSVG 295
K++G++ NP+GHS P +HN + + +G Y V DD+++ + G +V
Sbjct: 3 KLYGVIGNPIGHSMSPDIHNASLKDLGLDGHYHAFKVEEDDLEDAVKGIRALGIQGINVT 62
Query: 296 IPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALRERQGI 355
+PHK + D + AK IGAVNT+ RR D KLVGYNTD E + ++ L +
Sbjct: 63 VPHKVSIMDYLDHIDESAKVIGAVNTV-RREGD-KLVGYNTDGEGFVKSLMKVLDK---- 116
Query: 356 NGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRG--ARVIIFNRNYERAKALADAV--- 410
PI+ F+++GAGGA RA+ F +R + I NR E+AK L ++
Sbjct: 117 --------PISELSFLMIGAGGAARAI-FTTIARDIPKKFDICNRTLEKAKQLTESTPSF 167
Query: 411 -SGEALHFEYLHEFFPEKGMILANASAIGMEPNSDQSPVPKEALKAYELVFDAVYTPRNT 469
+ E L + E + +I+ + +++GM PN D P+ + + +V D VY P T
Sbjct: 168 HNKEVLSIKEAEERLEQYDVII-HTTSVGMYPNVDDVPLSLQRAASSAVVCDIVYNPIQT 226
Query: 470 RLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRKLVLEQF 518
LL++A + G + GV MF+ QA F+L+TG + MR +V+ Q
Sbjct: 227 ALLKQANQKGLKTLDGVGMFVEQAALSFQLWTGREPDIEKMRSIVIGQL 275
>gi|257875721|ref|ZP_05655374.1| shikimate 5-dehydrogenase [Enterococcus casseliflavus EC20]
gi|257809887|gb|EEV38707.1| shikimate 5-dehydrogenase [Enterococcus casseliflavus EC20]
Length = 286
Score = 141 bits (356), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 91/297 (30%), Positives = 146/297 (49%), Gaps = 30/297 (10%)
Query: 233 INPDTKIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLV--DDVKEFFRTYSGTDFA 290
I T++ L + P HS P +HN +F + +Y+ V DD+ ++ D
Sbjct: 2 ITGHTRLAALFAKPAKHSISPAMHNLSFEEQGIDAVYLAFDVEPDDLAASIQSIRQLDLL 61
Query: 291 GFSVGIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALR 350
G ++ +PHK AVA DE P A+ IGA+NTI+ + +G+L+G+NTD + A+ED
Sbjct: 62 GVNLSMPHKMAAVALMDECSPAAELIGAINTIVNQ--EGRLIGHNTDGIGFMRALEDI-- 117
Query: 351 ERQGINGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGARVI-IFNRNYE-------- 401
I G ++GAGGA A+ A G + I +FNR E
Sbjct: 118 -----------QVSIIGDTMTVIGAGGAATAIISQAALDGVKTIHVFNRKDEFYPIIQEK 166
Query: 402 ---RAKALADAVSGEALHFEYLHEFFPEKGMILANASAIGMEPNSDQSPVPKEALKAYEL 458
A+ A ++ L + + ++ +L NA+ +GM+PN SP+ + L L
Sbjct: 167 LTQIAQKTACEITLTDLEDQMALKTAIDQSSLLVNATGVGMKPNDTVSPLKDKTLLRESL 226
Query: 459 -VFDAVYTPRNTRLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRKLV 514
V+D +Y PR T+LL++A VGA +G+ M + Q F L+TG P + ++ L+
Sbjct: 227 AVYDVIYNPRETQLLKDAKAVGAKTANGLSMLLYQGAAAFELWTGKAMPVEKVKALI 283
>gi|333896985|ref|YP_004470859.1| shikimate dehydrogenase [Thermoanaerobacterium xylanolyticum LX-11]
gi|333112250|gb|AEF17187.1| Shikimate dehydrogenase [Thermoanaerobacterium xylanolyticum LX-11]
Length = 283
Score = 141 bits (356), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 97/292 (33%), Positives = 159/292 (54%), Gaps = 26/292 (8%)
Query: 232 HINPDTKIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLVD--DVKEFFRTYSGTDF 289
+IN T I+G++ +P+GHS P++HN AF + FN +YV V+ D+K+
Sbjct: 2 NINSKTSIYGIIGHPIGHSLSPLIHNYAFENLDFNSVYVSFDVNEEDLKDAIIGIKALGI 61
Query: 290 AGFSVGIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDAL 349
G +V +PHKE + D + AK IGAVNTI G L GYNTD ++ ++L
Sbjct: 62 KGLNVTVPHKESVIKYLDRISDEAKLIGAVNTIKNNS--GSLEGYNTD----VTGFMESL 115
Query: 350 RERQGINGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGARVI-IFNRNYERAKALA- 407
+E H + GK V++GAGGA +A+A G GA+ I + NR+ ++AK L+
Sbjct: 116 KE---------HNVDVVGKNAVILGAGGAAKAVAVGLALLGAKSIYVCNRSIDKAKELSI 166
Query: 408 ---DAVSGEALHFEYLHEFFPEKGMILANASAIGMEPNSDQSPVPKEALKAYELVFDAVY 464
+ + ++L Y ++ IL NA+++GM PN D SP+ ++ + + V+D +Y
Sbjct: 167 HMENNFNIKSLGISYNDLNMLDEIDILINATSVGMHPNVDVSPIGEDVVAKAKFVYDIIY 226
Query: 465 TPRNTRLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRKLVLE 516
P T L A + ++G++M I QA+ F+++TG +F +K++L
Sbjct: 227 NPEKTLFLSYAEKYRIKYINGLDMLINQAIDSFKIWTGA----NFDKKIILN 274
>gi|452204749|ref|YP_007484878.1| shikimate 5-dehydrogenase [Dehalococcoides mccartyi BTF08]
gi|452111805|gb|AGG07536.1| shikimate 5-dehydrogenase [Dehalococcoides mccartyi BTF08]
Length = 286
Score = 141 bits (355), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 94/288 (32%), Positives = 143/288 (49%), Gaps = 27/288 (9%)
Query: 235 PDTKIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLV--DDVKEFFRTYSGTDFAGF 292
PD +FG++ PV HS P + N AF+H + N +Y+ + +D++ + + G
Sbjct: 5 PDA-LFGIIGYPVSHSVSPAMQNAAFKHCKLNYLYLTIAAKPEDLQNVIASMRPLNIRGL 63
Query: 293 SVGIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALRER 352
+V IPHK + D + P AK IGAVNTI+ +G+L GYNTD + +E
Sbjct: 64 NVTIPHKIEIIKYIDTLDPAAKKIGAVNTIVNE--NGQLKGYNTDFGGFVRLLEH----- 116
Query: 353 QGINGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGARVIIFNRNYERAKALADAV-- 410
N +A A F L+GAGG+ A++ + G + + R E+AK LA +
Sbjct: 117 ---NRIAP-----AKHRFALLGAGGSAHAISLAICTLGGHLTVLARQEEKAKDLAAKMCL 168
Query: 411 ------SGEALHFEYLHEFFPEKGMILANASAIGMEPNSDQSPVPKEALKAYELVFDAVY 464
G L+ L E E +I+ N + IGM + QS +P L+ V DA+Y
Sbjct: 169 RFKGKAQGLELNEANLEETLAESDIIV-NCTPIGMGNLAGQSLIPPRLLRPDLTVIDAIY 227
Query: 465 TPRNTRLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRK 512
P TRLL +A + GA +++G+EM + Q F ++T AP M K
Sbjct: 228 NPCKTRLLEDAEKKGAKIINGLEMLVWQGAMSFEIWTSQKAPFRVMMK 275
>gi|340624235|ref|YP_004742688.1| shikimate 5-dehydrogenase [Methanococcus maripaludis X1]
gi|339904503|gb|AEK19945.1| shikimate 5-dehydrogenase [Methanococcus maripaludis X1]
Length = 278
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 92/294 (31%), Positives = 158/294 (53%), Gaps = 25/294 (8%)
Query: 233 INPDTKIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLV--DDVKEFFRTYSGTDFA 290
IN TK+ GL+ +PV HS P++HN A + + N Y V +++K+ +F
Sbjct: 2 INSKTKLVGLIGHPVDHSFSPLMHNAAIKDLKINYRYFAFDVSEENLKDVVAGAKAFNFR 61
Query: 291 GFSVGIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALR 350
GF++ IPHK + DE+ A++IGAVNT+ + +GK +GYNTD ++ AL
Sbjct: 62 GFNITIPHKMNIMKYLDEIDSDAEAIGAVNTV--KIENGKAIGYNTDG----IGVKKALE 115
Query: 351 ERQGINGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGARVIIFNRNYERAKALADAV 410
E+ GI + K +++G+GGA RA++F ++ + I NRN E+A+ L+ +
Sbjct: 116 EKTGI---------LYDKNILIIGSGGASRAVSFEL-AKDNNLTIVNRNIEKAENLSKEI 165
Query: 411 SGEALHFEYLH----EFFPEKGMILANASAIGMEPNSDQSPV-PKEALKAYELVFDAVYT 465
SG+ L+ + E I+ N + +GM P+++ PV P +K +V D +Y
Sbjct: 166 SGKLKKENPLNYGGLDINIENFDIIINTTPVGMYPHTEVEPVIPLNNIKKDAVVMDLIYN 225
Query: 466 PRNTRLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDF-MRKLVLEQF 518
P L+EA + GA ++G+ M + Q F ++T G+ P+ + M+K ++ +
Sbjct: 226 PLEPVFLKEAKKYGAKTINGIGMLVYQGAVSFEIWT-GVKPDIYVMKKSIISKI 278
>gi|158319101|ref|YP_001511608.1| shikimate 5-dehydrogenase [Alkaliphilus oremlandii OhILAs]
gi|166988268|sp|A8MEE1.1|AROE_ALKOO RecName: Full=Shikimate dehydrogenase
gi|158139300|gb|ABW17612.1| shikimate 5-dehydrogenase [Alkaliphilus oremlandii OhILAs]
Length = 286
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 96/292 (32%), Positives = 152/292 (52%), Gaps = 27/292 (9%)
Query: 233 INPDTKIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLV--DDVKEFFRTYSGTDFA 290
I +TK+ G++ P+ S P +HN AF++ N IY+P V D+ + F
Sbjct: 5 ITDETKLTGIIGRPIKQSFSPKIHNGAFQYLNLNYIYIPFEVVQQDLSKTVEAMKVLKFR 64
Query: 291 GFSVGIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALR 350
GF+V +PHK + DEV AK IGAVNT++ + +GKLVG+NTD + + ++ED
Sbjct: 65 GFNVTMPHKREVMNYLDEVSENAKIIGAVNTVVNQ--NGKLVGHNTDGKGYVQSLED--- 119
Query: 351 ERQGINGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGAR-VIIFNRNYERAKALADA 409
+GI + K FV+ GAGGA R++A GA+ + I NR ++A +A
Sbjct: 120 --EGI--------YVKEKTFVIAGAGGAARSVAVQLALDGAKKITILNRTIDKAHDIAQL 169
Query: 410 V--SGEALHFEY--LHEFFPEKGM----ILANASAIGMEPNSDQSPVPKEALKAYELVF- 460
+ S +H E L K + +L N +++GM ++S + +E + LV
Sbjct: 170 IGMSIPNVHIEINCLENKTLAKAVEEADVLINTTSLGMYSMEEESIIGEEKVLPSNLVVS 229
Query: 461 DAVYTPRNTRLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRK 512
D +Y P T+LL++A G ++G+ M I QA F L+T P D+++K
Sbjct: 230 DLIYNPAKTKLLQQAESRGCKTINGLGMLIGQAAIAFELWTEVAMPIDYIKK 281
>gi|383791883|ref|YP_005476457.1| shikimate 5-dehydrogenase [Spirochaeta africana DSM 8902]
gi|383108417|gb|AFG38750.1| shikimate 5-dehydrogenase [Spirochaeta africana DSM 8902]
Length = 509
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 110/372 (29%), Positives = 167/372 (44%), Gaps = 44/372 (11%)
Query: 146 ACMQATGADVMKLEIAVDSITDLAPVFEMLTHCQVPLIALAVGSRGLISQLLGPKFGGFL 205
A M + AD+++L + P F+++ L +G G+ S++ FG
Sbjct: 151 AVMPGSTADLLQL---LQFARSFRPGFQVI---------LGMGEWGIPSRICPRVFGSCW 198
Query: 206 VYGSLGGKSV--PGLPTLVSLKQVYQLEHINPDTKIFGLVSNPVGHSKGPILHNPAFRHT 263
Y + +S PG L + Y+ +PDT+ F + NPV HSK P HN F
Sbjct: 199 TYAAETARSAAAPGQLGAAELARKYRTHLHHPDTRYFAIFGNPVMHSKSPEFHNERFAEA 258
Query: 264 RFNGIYVPMLVDDVKEFFRTYSGTDFAGFSVGIPHKEPAVAC-CDEVHPLAKSIGAVNTI 322
+ Y+P + D + G S+ IPHK A+ E P +++GA NT
Sbjct: 259 GKDAAYIPFPLSDATLGEQVIRQWPLQGVSITIPHKHGALGWESAEPVPAVQAVGAANTA 318
Query: 323 IRRPIDGKLVGYNTDCESAISAIEDALRERQGINGVASHTSPIAGKIFVLVGAGGAGRAL 382
+ +L+ NTD E + +++ +G+N + G +++GAGGA RA+
Sbjct: 319 VVAGHGIELL--NTDVEGFLHPLQE-----RGLN--------LRGMHCLVIGAGGAARAI 363
Query: 383 AFGAKSRGARVIIFNRNYERAKALADAVSGEALHFEYLHEFFPEKGMI------------ 430
+G S GA+V++ NR RA LA A+ H L P G +
Sbjct: 364 VYGLLSSGAQVLVLNRTASRADDLAAAMMQTVPHSTVLAAELPSDGDVRRVCAECWGQDP 423
Query: 431 --LANASAIGMEPNSDQSPVPKEALKAYELVFDAVYTPRNTRLLREAAEVGATVVSGVEM 488
+ + +GMEP D P+ ELV+D +YTP +T LLR AA G V++G M
Sbjct: 424 GLIVQTTQVGMEPAIDADPISGYRFSGDELVYDIIYTPEHTALLRRAAGAGCPVITGRMM 483
Query: 489 FIRQALGQFRLF 500
FI QA Q R F
Sbjct: 484 FIAQAEAQSRRF 495
>gi|403384196|ref|ZP_10926253.1| shikimate dehydrogenase [Kurthia sp. JC30]
Length = 277
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 90/286 (31%), Positives = 146/286 (51%), Gaps = 19/286 (6%)
Query: 238 KIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLV--DDVKEFFRTYSGTDFAGFSVG 295
K + ++ +P+ HS P++HN +G Y+P+ + +++ E F +GF+V
Sbjct: 3 KWYAVIGDPIEHSMSPLMHNTWMNAEERDGTYIPLHITKENLVEGFNGMKLLGCSGFNVT 62
Query: 296 IPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALRERQGI 355
IPHKE + D++ PLA+ +GAVNT++R+ +DG GYNTD + ++EDA
Sbjct: 63 IPHKEAIIPLLDDIDPLAQKMGAVNTVVRQ-LDGTYKGYNTDGLGFVKSLEDA------- 114
Query: 356 NGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRG-ARVIIFNRNYERAKALADA--VSG 412
V +H K +++GAGGA R + F G ++ I NR +A+A+ D V
Sbjct: 115 --VGTHHKD---KRVLVIGAGGASRGICFALAQEGYTKLSIANRTVAKAQAICDELDVVA 169
Query: 413 EALHFEYLHEFFPEKGMILANASAIGMEPNSDQSPVPKEALKAYELVFDAVYTPRNTRLL 472
A E E G+I+ SA G+ ++ P+ E L +V D VY P T L
Sbjct: 170 TAYSLEEAAASLDEFGIIIQTTSA-GLNNSAFSLPLSLEKLSNTAIVADIVYNPLMTPFL 228
Query: 473 REAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRKLVLEQF 518
++ + GATVV+G+ MFI Q + + D ++ ++LEQ
Sbjct: 229 AQSQQKGATVVTGLGMFIHQGALAYSYWNDVYPTADTVKPVLLEQL 274
>gi|330444737|ref|YP_004377724.1| 3-dehydroquinate dehydratase/shikimate 5-dehydrogenase
[Chlamydophila pecorum E58]
gi|328807847|gb|AEB42020.1| 3-dehydroquinate dehydratase/shikimate 5-dehydrogenase
[Chlamydophila pecorum E58]
Length = 480
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 146/501 (29%), Positives = 221/501 (44%), Gaps = 59/501 (11%)
Query: 10 LVCTQLECETTEEMQASIEQAKVEGADLVELCIDSMEFSHISEVDKLIQHPTLPAIVSYR 69
L+C + T + + I + + D +EL +DS+ S + L+ P I++Y+
Sbjct: 4 LLCATINGPTFSQAKQQILDS-LPFVDSIELRVDSLSTLSPSALSFLLAMAKAP-ILTYK 61
Query: 70 LKSSRKSSDEACKNTCLQVLRRA-LDLDVEFVEMDYEVASDPLMSEIIYSRSNTKIIVSS 128
SS K L L LD+D++F + D L +I S + KII+S
Sbjct: 62 KPQGLSSSAWVEKILSLAALSPTYLDVDIQFPQ-------DAL-RKIRLSYPDIKIILSH 113
Query: 129 YLNGGGKPTTEKLGDVIACMQATGADVMKLEIAVDSITDLAPVFEMLTHCQVP--LIALA 186
+ T E + M +T A K I S T L + + +P AL
Sbjct: 114 HTE-----TYEDPHHIYHKMHSTPAHYYK--IVTYSETPLQTLRFVHAARSLPPQATALC 166
Query: 187 VGSRGLISQLLGPKFGGFLVY--GSLGGKSVPGLPTLVSLKQVYQLEHINPDTKIFGLVS 244
+G L S++L P G + Y G + PG P L L Y ++++ + +I+ L+
Sbjct: 167 LGEHSLASRVLSPLMGNAMNYAAGRHASPAAPGQPHLDDL-LAYNYKNLSQEAEIYALIG 225
Query: 245 NPVGHSKGPILHNPAFRHTRFNGIYV--PMLVDDVKEFFRTYSGTDFAGFSVGIPHKEPA 302
NPV S I HN F Y+ P+ + + EFF F G SV +P K P
Sbjct: 226 NPVDRSPSHITHNKFFSKLLIKASYIKIPLSPEQLTEFFIILRTLPFRGLSVTMPLKVPV 285
Query: 303 VACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALRERQGINGVASHT 362
+ D + P A+ GAVNTI+ + L GYNTD + A + L R+G+
Sbjct: 286 MDYMDILDPSAQLCGAVNTILFH--EDVLYGYNTDGQGAFN-----LLVRKGVA------ 332
Query: 363 SPIAGKIFVLVGAGGAGRALAFGAKSRGARVIIFNRNYERAKALADAVSGEALHFEYLHE 422
I K ++GAGGA R+LA GA + IFNR ++ A++LA +G A + L
Sbjct: 333 --IKNKHVAILGAGGAARSLAVTLAHHGAYIHIFNRTFQNAESLAKLCNGTAHPLKDLRG 390
Query: 423 FFPEKGMILANASAIGMEPNSDQSPVPKEALKAYE---LVFDAVYTPRNTRLLREAAEVG 479
F + +L N +P E +E ++ D P+NT L +A ++G
Sbjct: 391 FASD---LLINT-------------LPPEIGFPWEFPPIILDINTFPKNTPYLLKAQQLG 434
Query: 480 ATVVSGVEMFIRQALGQFRLF 500
V G EMFI QAL QF L+
Sbjct: 435 VRVFHGYEMFIEQALLQFSLW 455
>gi|402571542|ref|YP_006620885.1| shikimate dehydrogenase [Desulfosporosinus meridiei DSM 13257]
gi|402252739|gb|AFQ43014.1| shikimate dehydrogenase [Desulfosporosinus meridiei DSM 13257]
Length = 279
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 89/286 (31%), Positives = 144/286 (50%), Gaps = 22/286 (7%)
Query: 238 KIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLVDD--VKEFFRTYSGTDFAGFSVG 295
K F ++ NP+ HS P +HN + N Y V++ ++E + FAG++V
Sbjct: 3 KQFAVIGNPIKHSLSPAMHNAGYETLGINAEYQRFRVEEHCLEEAVKGLRALGFAGWNVT 62
Query: 296 IPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALRERQGI 355
+PHKE V+ D + P A+ GAVNT+ + +G+L+G+NTD + + ++E+ LR
Sbjct: 63 LPHKEAIVSFMDTLTPEAEKAGAVNTVKNQ--NGRLIGHNTDGKGFVRSVENDLR----- 115
Query: 356 NGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGARVIIFNRNYERAKALAD---AVSG 412
+ GK VL+GAGGA + +A +G + I NRN E+AK L +V G
Sbjct: 116 --------GLKGKKAVLLGAGGASKGIAMALAQQGMNLHILNRNPEKAKTLVQIIHSVGG 167
Query: 413 EALHFEYLHEFFPEKGMILANASAIGMEPNSDQSPVPKEALKAYELVFDAVYTPRNTRLL 472
A E+ + E +L +++G+ N + P E + LV D ++ P T L
Sbjct: 168 TATFGEFEPGDWLENLDLLVQTTSVGL--NKEPFPFSLEGIDKEALVVDIIFNPLETSFL 225
Query: 473 REAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRKLVLEQF 518
REA ++G +G+EM + Q + + G AP D MR+ + Q
Sbjct: 226 REAKKLGCRTQNGLEMLLYQGALAWEFWLGEQAPLDAMRQALKNQL 271
>gi|89100813|ref|ZP_01173665.1| shikimate 5-dehydrogenase [Bacillus sp. NRRL B-14911]
gi|89084459|gb|EAR63608.1| shikimate 5-dehydrogenase [Bacillus sp. NRRL B-14911]
Length = 279
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 99/288 (34%), Positives = 150/288 (52%), Gaps = 23/288 (7%)
Query: 238 KIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLV--DDVKEFFRTYSGTDFAGFSVG 295
K+F ++ +P+GHS P +HN F + YVP+ V +D+ + + AGF+V
Sbjct: 3 KLFAVIGDPIGHSMSPAMHNDLFGIYGLDACYVPLKVRREDLGDAVKGLRAIGVAGFNVT 62
Query: 296 IPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALRERQGI 355
+PHK + DE+ LA++IGAVNT++ + DGKL+GYNTD E +
Sbjct: 63 VPHKTEIMPFLDEIDQLAEAIGAVNTVLNK--DGKLIGYNTDGEGYV------------- 107
Query: 356 NGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGARVI-IFNRNYERAKALADA----V 410
G+AS + K ++ GAGGA +A+ + +G + I I NR +A+ALAD V
Sbjct: 108 RGLASEVPDFSRKKILIAGAGGAAKAIYYTLAQKGVQAIDICNRTAAKAEALADKCPFPV 167
Query: 411 SGEALHFEYLHEFFPEKGMILANASAIGMEPNSDQSPVPKEALKAYELVFDAVYTPRNTR 470
+AL F+ E E +I+ + IGM P+ + P LKA V D +Y P T+
Sbjct: 168 RTDALGFQQAEEKLAEYDIII-QTTPIGMLPDVNALPFGLYNLKAGAFVSDIIYNPLETK 226
Query: 471 LLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRKLVLEQF 518
LREA GA++ +G++MF+ Q F +TG D M V+ Q
Sbjct: 227 FLREAKNKGASIQNGLKMFVCQGALAFERWTGTFPDTDRMEAGVITQL 274
>gi|257457569|ref|ZP_05622736.1| putative 3-dehydroquinate dehydratase, type 1/shikimate
5-dehydrogenase [Treponema vincentii ATCC 35580]
gi|257444955|gb|EEV20031.1| putative 3-dehydroquinate dehydratase, type 1/shikimate
5-dehydrogenase [Treponema vincentii ATCC 35580]
Length = 496
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 96/366 (26%), Positives = 166/366 (45%), Gaps = 29/366 (7%)
Query: 148 MQATGADVMKLEIAVDSITDLAPVFEMLTHCQVPLIALAVGSRGLISQLLGPKFGGFLVY 207
++ T +++K+ D++ ++ +F+ +A+G G+ S++L PK VY
Sbjct: 142 IRRTDEEIVKIAYKADNLAEVTALFKQAQQLNGQNTLIAMGKYGIPSRILAPKLHSSFVY 201
Query: 208 GSLGGKSVPGLPTL------VSLKQVYQLEHINPDTKIFGLVSNPVGHSKGPILHNPAFR 261
++ + + ++L ++Y+ IN T I+G+ S P +HN F
Sbjct: 202 -TMPREYIAKYHLEQEYIDPITLTELYRFRAINDQTGIYGVAGADTTKSLSPAIHNRGFE 260
Query: 262 HTRFNGIYVPMLVDDVKEFFRTYSGTDFAGFSVGIPHKEPAVACCDEVHPLAKSIGAVNT 321
N +Y+P+ +++E T AG S+ P K + D + P++ + GAVNT
Sbjct: 261 KKELNAVYIPISGTNIQEVIEFAKCTGIAGLSITHPFKFDVIPFLDSLGPVSTACGAVNT 320
Query: 322 IIRRPIDGKLVGYNTDCESAISAIEDALRERQGINGVASHTSPIAGKIFVLVGAGGAGRA 381
++ GK G NTD + I A+++ L H + K ++G GGA A
Sbjct: 321 VLFN--GGKRQGLNTDIDGFIRALQEFL-----------HVRNLRFKHVAIIGTGGAAHA 367
Query: 382 LAFGAKSRGARVIIFNRNYERAKALADAVSGEALHFEYLH----EFFPEKGMILANASAI 437
+A + +F R+ E+AK LAD + +E L + I+ ++++
Sbjct: 368 IANAVHQLHGKACVFGRSAEKAKKLADRYN---FQWEILDLASVRILKKYSEIIIQSTSV 424
Query: 438 GMEPNSDQSPVPKEALKAYELVFDAVYTPRNTRLLREAAEVGATVVSGVEMFIRQALGQF 497
GM D P+ + E VFD +Y P T LL+ A G + +G +M QA QF
Sbjct: 425 GMHEGED--PLEFYSFSGNEKVFDVIYVPEKTTLLKRAEAAGCHICNGYDMLRYQAYKQF 482
Query: 498 RLFTGG 503
LFTGG
Sbjct: 483 ELFTGG 488
>gi|50555858|ref|XP_505337.1| YALI0F12639p [Yarrowia lipolytica]
gi|74632651|sp|Q6C1X5.1|ARO1_YARLI RecName: Full=Pentafunctional AROM polypeptide; Includes: RecName:
Full=3-dehydroquinate synthase; Short=DHQS; Includes:
RecName: Full=3-phosphoshikimate
1-carboxyvinyltransferase; AltName:
Full=5-enolpyruvylshikimate-3-phosphate synthase;
Short=EPSP synthase; Short=EPSPS; Includes: RecName:
Full=Shikimate kinase; Short=SK; Includes: RecName:
Full=3-dehydroquinate dehydratase;
Short=3-dehydroquinase; Includes: RecName: Full=Shikimate
dehydrogenase
gi|49651207|emb|CAG78144.1| YALI0F12639p [Yarrowia lipolytica CLIB122]
Length = 1556
Score = 140 bits (353), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 147/509 (28%), Positives = 231/509 (45%), Gaps = 47/509 (9%)
Query: 33 EGADLVELCIDSM---------EFSHISEVDKLIQHPTLPAIVSYRLKSS--RKSSDEAC 81
EG +EL +D + E +S++ L Q+ LP + + R K+ R D+
Sbjct: 1067 EGCSALELRVDLLNENDEAIPSEEYVLSQLAILRQNVDLPILYTVRTKAQGGRFPDDKPV 1126
Query: 82 KNTCLQVLRRALDLDVEFVEMDYEVASDPLMSEIIYSRSNTKIIVSSY-LNGGGKPTTEK 140
+ L L +++ VE+ Y L+S + SR TK++ S + G ++ +
Sbjct: 1127 ELANLVNLGLKTAVELLDVELTYPAE---LVSSVGASRGYTKLLGSHHDFPGALNWSSLE 1183
Query: 141 LGDVIACMQATGADVMKLEIAVDSITDLAPVFEML-THCQVPLIALAVGSRGLISQ---- 195
++ A +A DV+KL S +D + H PL+A+ +GS G +S+
Sbjct: 1184 WENMYARAEAVPVDVVKLVGMAKSFSDNFALENFREAHTSSPLLAINMGSHGQLSRVTNT 1243
Query: 196 LLGPKFGGFLVYGSLGGKSVPGLPTLVSLKQVYQLEHINPDTKIFGLVSNPVGHSKGPIL 255
LL P + + L + PG ++ + Q + F +V P+GHSK PIL
Sbjct: 1244 LLTP-----VTHADLPVAAAPGQLSVEEINQTRSTIGMFNKNLSFFIVGTPIGHSKSPIL 1298
Query: 256 HNPAFRHTRFNGIYVPMLVDDVKEFFRT----YSGTDFAGFSVGIPHKEPAVACCDEVHP 311
HN F+ Y DD + + G SV IP K+ + DEV P
Sbjct: 1299 HNTMFKKLGLPYEYSRFKTDDAAAVNAKARALLAQGNLGGISVTIPLKQDIIPFLDEVSP 1358
Query: 312 LAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALRERQGINGVASHTSPIAGKIFV 371
LA+ IGAVNTII P +G L G NTD ++A+ R G N + T+ +
Sbjct: 1359 LAQQIGAVNTIIPGP-NGTLKGDNTDILGLVNAL-----TRFGANSLDKKTA-------L 1405
Query: 372 LVGAGGAGRALAFGAKSRG-ARVIIFNRNYERAKALADAVSG-EALHFEYL--HEFFPEK 427
+VGAGG A G +S G A+++I NR +A+A+AD EA+ + +++ P
Sbjct: 1406 IVGAGGTSLAAVHGLRSLGFAKILIANRTLSKAEAIADKFDNVEAVTLDSFVANKYTPSV 1465
Query: 428 GMILANASAIGMEPNSDQSPVPKEALKAYELVFDAVYTPRNTRLLREAAEV-GATVVSGV 486
+ A+ M S++ A LV +A Y+ T LL++ +V G +SG+
Sbjct: 1466 IVSCVPATTFSMLDESNKLVSAALAASPKGLVLEAAYSAEATPLLKQVMDVEGWEFISGL 1525
Query: 487 EMFIRQALGQFRLFTGGLAPEDFMRKLVL 515
M Q QFRL+TG AP++ K VL
Sbjct: 1526 YMLTEQGFEQFRLWTGIPAPKEVGEKAVL 1554
>gi|332157961|ref|YP_004423240.1| shikimate 5-dehydrogenase [Pyrococcus sp. NA2]
gi|331033424|gb|AEC51236.1| shikimate 5-dehydrogenase [Pyrococcus sp. NA2]
Length = 273
Score = 140 bits (353), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 104/287 (36%), Positives = 153/287 (53%), Gaps = 25/287 (8%)
Query: 233 INPDTKIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLVD--DVKEFFRTYSGTDFA 290
IN TK++GL+ PV HS PI+HN F N +Y+ V+ +++
Sbjct: 3 INAKTKVYGLIGKPVRHSLSPIMHNALFEKYNINAVYLAFEVELGRLRDAIMGAKALGIM 62
Query: 291 GFSVGIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALR 350
G +V +PHK DE+ A+ IG+VNTI DG+LVGYNTD A A+E
Sbjct: 63 GLNVTMPHKVEVTKFLDELSDEAREIGSVNTIANE--DGRLVGYNTDGIGARKALE---- 116
Query: 351 ERQGINGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGARVIIFNRNYERAKALAD-A 409
+ + G +++GAGGAGRA+A+ S+ A V++ NR E+AK L
Sbjct: 117 ----------RVTEVEGSKVLILGAGGAGRAIAY-ELSKVAEVVVLNRTLEKAKELEKFG 165
Query: 410 VSGEALHFEYLHEFFPEKGMILANASAIGMEPNSDQSPVPKEALKAYELVFDAVYTPRNT 469
V G++L E L ++ E IL NA+++GM ++S VPK L+ +V D VY P T
Sbjct: 166 VKGDSL--EEL-PYYIEWADILINATSVGM--GEERSIVPKNLLRPSLVVMDIVYKPLLT 220
Query: 470 RLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRKLVLE 516
RLLR+A +G V G+ M + Q F+++TG +FMR++ LE
Sbjct: 221 RLLRDARSMGCVTVDGLWMLVYQGAESFKIWTGVEVDVEFMRRVALE 267
>gi|328950649|ref|YP_004367984.1| shikimate dehydrogenase [Marinithermus hydrothermalis DSM 14884]
gi|328450973|gb|AEB11874.1| Shikimate dehydrogenase [Marinithermus hydrothermalis DSM 14884]
Length = 270
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 101/271 (37%), Positives = 137/271 (50%), Gaps = 31/271 (11%)
Query: 240 FGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPM------LVDDVKEFFRTYSGTDFAGFS 293
GL+ P+ HS P +H A + GIY + L V E R Y G +
Sbjct: 3 LGLIGYPLAHSVSPAMHRAALQAAGLEGIYRLLETPPDELESRVMEVRRGYRGVN----- 57
Query: 294 VGIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALRERQ 353
V +PHK + DEV P ++IGAVNTI+ +G+LVG+NTD A+E A
Sbjct: 58 VTVPHKVAVLPYLDEVSPEVQAIGAVNTIVNE--EGRLVGHNTDAPGFTRALEAA----- 110
Query: 354 GINGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGARVIIFNRNYERAKALADAVSGE 413
GV + G V++GAGGA RA+ + GARV + NR + RAKALA+ E
Sbjct: 111 ---GVTAR-----GLRAVVLGAGGAARAVVYALVQAGARVRVANRTFARAKALAEVFGAE 162
Query: 414 ALHFEYLHEFFP--EKGMILANASAIGMEPNSDQSPVPKEALKAYELVFDAVYTPRNTRL 471
A+ FE EF + +L NA+++G+ + SP+P E + E V D VY P TRL
Sbjct: 163 AVPFEG-PEFVRAVREADLLVNATSVGLN-DPGASPIP-EGVWPREAVVDIVYNPLETRL 219
Query: 472 LREAAEVGATVVSGVEMFIRQALGQFRLFTG 502
LREA G V G+ M + Q F L+TG
Sbjct: 220 LREARAAGLVAVDGLGMLVWQGALAFELWTG 250
>gi|288560500|ref|YP_003423986.1| shikimate 5-dehydrogenase AroE [Methanobrevibacter ruminantium M1]
gi|288543210|gb|ADC47094.1| shikimate 5-dehydrogenase AroE [Methanobrevibacter ruminantium M1]
Length = 298
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 94/304 (30%), Positives = 145/304 (47%), Gaps = 39/304 (12%)
Query: 237 TKIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLV--DDVKEFFRTYSGTDFAGFSV 294
TKI G++ +P+ H+ P + N N IY+P V D++ G +V
Sbjct: 6 TKILGVIGDPIEHTFSPAMQNAGLEALNLNYIYLPFHVKSDNLNSAIEGAKTLGIRGLNV 65
Query: 295 GIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLV---GYNTDCESAISAIEDALRE 351
IPHK + C DEV P+A IGAVNTI + + + GYNTD + AIE+
Sbjct: 66 TIPHKREVITCLDEVDPIANMIGAVNTIKFDYDENEGISTKGYNTDAYGCLRAIEE---- 121
Query: 352 RQGINGVASHTSPIAGKIFVLVGAGGAGRALAFG-AKSRGARVIIFNRNYERAKALADAV 410
+ + K +VGAGGA RA+AF A S + I NRN+ +A++LA+ +
Sbjct: 122 ----------KASVKDKKITIVGAGGASRAIAFQMASSDIGELSILNRNFNKAESLANDI 171
Query: 411 SGEALHFEYLHEFFP---------------EKGMILANASAIGMEPNSDQSPVPKEALKA 455
+ + L++ F ++ IL + + IGM PN + P+ +
Sbjct: 172 KS---NLKQLNDNFNLNINAYDMDSLKREIQESEILIDTTPIGMYPNINDKPIASADMMH 228
Query: 456 YELVF-DAVYTPRNTRLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRKLV 514
+L+ D VYTP T L++EA + A VV G +M + Q + F ++ G AP M +
Sbjct: 229 DDLIVNDIVYTPMETSLIKEAKKANAEVVYGYKMLLYQGIRSFEIWLGEEAPVKEMENAL 288
Query: 515 LEQF 518
L+ F
Sbjct: 289 LKVF 292
>gi|386759165|ref|YP_006232381.1| shikimate 5-dehydrogenase [Bacillus sp. JS]
gi|384932447|gb|AFI29125.1| shikimate 5-dehydrogenase [Bacillus sp. JS]
Length = 280
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 93/286 (32%), Positives = 151/286 (52%), Gaps = 24/286 (8%)
Query: 238 KIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLV--DDVKEFFRTYSGTDFAGFSVG 295
K++G++ NP+GHS P +HN + + +G Y V +D+++ + G +V
Sbjct: 3 KLYGVIGNPIGHSMSPDIHNASLKDLGLDGHYHAFKVEENDLEDAVKGIKALGVQGINVT 62
Query: 296 IPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALRERQGI 355
+PHK + D + AK +GAVNT+ RR D KLVGYNTD E + ++ L +
Sbjct: 63 VPHKVSIMDYLDHIDESAKVLGAVNTV-RREGD-KLVGYNTDGEGFVKSLMKVLDK---- 116
Query: 356 NGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGA--RVIIFNRNYERAKALADAV--- 410
PI+ F+++GAGGA RA+ F R + + I NR E+AK L ++
Sbjct: 117 --------PISELSFLMIGAGGAARAI-FTTIVRNSPKKFDICNRTLEKAKRLTESTPSF 167
Query: 411 -SGEALHFEYLHEFFPEKGMILANASAIGMEPNSDQSPVPKEALKAYELVFDAVYTPRNT 469
+ E L + E + +I+ + +++GM PN D+ P+ + + +V D VY P T
Sbjct: 168 HNKEVLSLKEAEERLEQYDVII-HTTSVGMYPNVDEVPLSLQRAASSAVVCDIVYNPIQT 226
Query: 470 RLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRKLVL 515
LL+EA++ G + GV MF+ QA F+L+TG + MR +V+
Sbjct: 227 ALLKEASQKGLKTLDGVGMFVEQAALSFQLWTGQEPDIEKMRTIVI 272
>gi|435846092|ref|YP_007308342.1| shikimate dehydrogenase [Natronococcus occultus SP4]
gi|433672360|gb|AGB36552.1| shikimate dehydrogenase [Natronococcus occultus SP4]
Length = 266
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 104/279 (37%), Positives = 141/279 (50%), Gaps = 24/279 (8%)
Query: 238 KIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPM--LVDDVKEFFRTYSGTDFAGFSVG 295
++GL+ NPVGHS P +H A+ + YV D+++ R G +V
Sbjct: 2 DVYGLIGNPVGHSLSPPMHEAAYDELGIDARYVTFEPAPDELEAAIRGAEALGVCGLNVT 61
Query: 296 IPHKEPAVACCDEVHPLAKSIGAVNTI-IRRPIDGKLVGYNTDCESAISAIEDALRERQG 354
IP K + E LA IGAVNTI P + G+NTD A+ A LRE
Sbjct: 62 IPFKRDVLEFV-EPDELAGRIGAVNTIDFSGP---EPTGHNTDAAGALRA----LRE--- 110
Query: 355 INGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGARVIIFNRNYERAKALADAVSG-E 413
+GV + + ++VGAGGAGRA++FG GA V I NR A+ LA V G +
Sbjct: 111 -DGVVLEDADV-----LVVGAGGAGRAISFGLADAGAAVTIANRTASTARELAADVPGAD 164
Query: 414 ALHFEYLHEFFPEKGMILANASAIGMEPNSDQSPVPKEALKAYELVFDAVYTPRNTRLLR 473
E L + + +L NA+++GME D +PVP EAL V DAVY P TRLLR
Sbjct: 165 GRGLEDLGDVLADAD-VLVNATSVGME--EDATPVPAEALHGELAVLDAVYRPLETRLLR 221
Query: 474 EAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRK 512
+A + GAT V G M + Q + F L+T AP + M +
Sbjct: 222 DAEDAGATTVDGAWMLLYQGVEAFELWTDRTAPVEEMNE 260
>gi|134298882|ref|YP_001112378.1| shikimate 5-dehydrogenase [Desulfotomaculum reducens MI-1]
gi|170652868|sp|A4J3A0.1|AROE_DESRM RecName: Full=Shikimate dehydrogenase
gi|134051582|gb|ABO49553.1| shikimate dehydrogenase [Desulfotomaculum reducens MI-1]
Length = 291
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 105/296 (35%), Positives = 155/296 (52%), Gaps = 25/296 (8%)
Query: 233 INPDTKIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLV--DDVKEFFRTYSGTDFA 290
IN T++ GL PV HS P +HN AF+ N YVP V D++K+ + A
Sbjct: 6 INGKTQVCGLFGFPVEHSFSPAMHNAAFQQLDLNWTYVPFRVHPDNLKQAVTGIFSLNMA 65
Query: 291 GFSVGIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALR 350
G +V +PHK+ + DE+ P A+ IGAVNTI+ +GKLVGYNTD + + A+ + R
Sbjct: 66 GVNVTVPHKQRVMPFLDELEPAARIIGAVNTIVNN--NGKLVGYNTDGKGFVRALTEEAR 123
Query: 351 ERQGINGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGARVI-IFNRNYERAKALA-- 407
+P+ GK +L+GAGGA RA+A G R I I NRN E+A+ LA
Sbjct: 124 -----------FNPL-GKSAILIGAGGAARAVAVQLALSGLRTIYITNRNQEKAEELARD 171
Query: 408 --DAVSGEALHFEYLHEFFPEKGM---ILANASAIGMEPNSDQSP-VPKEALKAYELVFD 461
++ A + + ++ + ++ A+ +GM P DQ P P + L LV D
Sbjct: 172 ILESTDTSASMIPWGNNLLGKRMVEVDLVVQATPLGMSPEVDQVPEFPFQMLTPQHLVCD 231
Query: 462 AVYTPRNTRLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRKLVLEQ 517
+Y P T LR A G+ ++G+ M + Q + F L+TG AP D MR ++ +Q
Sbjct: 232 LIYNPEQTCFLRRAKSRGSKTMNGLAMLLYQGVLAFELWTGFTAPVDVMRNVLHKQ 287
>gi|403237574|ref|ZP_10916160.1| shikimate 5-dehydrogenase [Bacillus sp. 10403023]
Length = 281
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 95/286 (33%), Positives = 141/286 (49%), Gaps = 25/286 (8%)
Query: 238 KIFGLVSNPVGHSKGPILHNPAFR----HTRFNGIYVPMLVDDVKEFFRTYSGTDFAGFS 293
K++G++ NP+ HS P + N F R++ +V VK G G +
Sbjct: 3 KVYGVIGNPISHSMSPAMLNDMFETYHIEARYHAFHVQ--TGQVKAAIEGIRGLGVYGIN 60
Query: 294 VGIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALRERQ 353
V IPHK + DEV +A +IGAVNTI+ +GKL+GYNTD I +
Sbjct: 61 VTIPHKVEVIDYLDEVEEVAANIGAVNTIVNE--NGKLIGYNTDGNGFI----------R 108
Query: 354 GINGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRG-ARVIIFNRNYERAKALAD---- 408
+N V S+ + + + VGAGGA R + + G +++ I NR ERAK + D
Sbjct: 109 SLNRVISNEELRSANVLI-VGAGGAARGIFISLAAMGVSKIDIVNRTIERAKGIIDDCRF 167
Query: 409 AVSGEALHFEYLHEFFPEKGMILANASAIGMEPNSDQSPVPKEALKAYELVFDAVYTPRN 468
V L F+ E K ++ N +++GM PN D +P+ E L +V D +Y P
Sbjct: 168 EVESHPLSFKEA-EASLSKYQVVVNTTSVGMHPNVDDTPLSVENLAPKTIVSDIIYNPFE 226
Query: 469 TRLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRKLV 514
T+ LR+AA+ GA +G+ MF+ Q F +TG D M +LV
Sbjct: 227 TKFLRDAAKYGAITQNGIGMFVYQGALAFEKWTGIFPDTDRMERLV 272
>gi|376261037|ref|YP_005147757.1| shikimate 5-dehydrogenase [Clostridium sp. BNL1100]
gi|373945031|gb|AEY65952.1| shikimate 5-dehydrogenase [Clostridium sp. BNL1100]
Length = 294
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 83/286 (29%), Positives = 142/286 (49%), Gaps = 29/286 (10%)
Query: 230 LEHINPDTKIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLVDDVK--EFFRTYSGT 287
+E +N T+++G++ NP+ H+K P +HN F+ N +Y+P+LV++ K + G
Sbjct: 4 VEIVNGKTQLYGVLGNPIEHTKSPFIHNTLFKKFGVNAVYLPVLVENGKLEQVMDGLKGI 63
Query: 288 DFAGFSVGIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIED 347
+F GF+V +P+K+ + DEV +GA+NT+ ++ +G+ +G NTD E + D
Sbjct: 64 NFLGFNVTVPYKKDVIKYLDEVSAEGMLMGAINTVKKQ--NGRFIGTNTDAEGFVRDFCD 121
Query: 348 ALRERQGINGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRG-ARVIIFNRNYERAKAL 406
+ GK +L+GAGG RA+A + G + I NR AK++
Sbjct: 122 GFE------------TTFKGKRVMLLGAGGTSRAIAVKLATEGIEHLTIVNRTEANAKSI 169
Query: 407 ADAVSGEALHFEYLHEFFPEK---------GMILANASAIGMEPNSDQSPVPKE-ALKAY 456
+D V+ + ++ PEK I+ N + GM D +P +
Sbjct: 170 SDLVNSNFGNI--VNTMLPEKDKLDKELENNQIVINTTPAGMSTYLDSTPFDIDFNFNGT 227
Query: 457 ELVFDAVYTPRNTRLLREAAEVGATVVSGVEMFIRQALGQFRLFTG 502
+LV+D +Y P+ TR L +A G + +G M I Q + F ++TG
Sbjct: 228 QLVYDVLYVPKKTRFLIQAENAGCKIRNGFGMLINQGVSSFEIWTG 273
>gi|384176190|ref|YP_005557575.1| shikimate dehydrogenase [Bacillus subtilis subsp. subtilis str.
RO-NN-1]
gi|349595414|gb|AEP91601.1| shikimate dehydrogenase [Bacillus subtilis subsp. subtilis str.
RO-NN-1]
Length = 280
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 95/286 (33%), Positives = 149/286 (52%), Gaps = 24/286 (8%)
Query: 238 KIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLV--DDVKEFFRTYSGTDFAGFSVG 295
K++G++ NP+GHS P +HN + + +G Y V +D+++ + G +V
Sbjct: 3 KLYGVIGNPIGHSMSPDIHNASLKDLGLDGHYHAFKVEENDLEDAVKGIRALGVQGINVT 62
Query: 296 IPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALRERQGI 355
+PHK + D + AK IGAVNT+ RR D KLVGYNTD E + ++ L +
Sbjct: 63 VPHKVSIMDYLDHIDESAKVIGAVNTV-RREGD-KLVGYNTDGEGFVKSLMKVLDK---- 116
Query: 356 NGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGA--RVIIFNRNYERAKALADAV--- 410
PI+ F+++GAGGA RA+ F R + I NR E+AK L +A
Sbjct: 117 --------PISELSFLMIGAGGAARAI-FTTIVRNTPKKFDICNRTLEKAKRLTEATPSF 167
Query: 411 -SGEALHFEYLHEFFPEKGMILANASAIGMEPNSDQSPVPKEALKAYELVFDAVYTPRNT 469
+ E L + E + +I+ + +++GM PN D P+ + + +V D VY P T
Sbjct: 168 HNKEVLSIKEAEERLGQYDVII-HTTSVGMYPNVDDVPLSLQRAASSAVVCDIVYNPIQT 226
Query: 470 RLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRKLVL 515
LL+EA++ G + GV MF+ QA F+L+TG + MR +V+
Sbjct: 227 ALLKEASQKGLKTLDGVGMFVEQAALSFQLWTGQEPDIEKMRSIVI 272
>gi|334341634|ref|YP_004546614.1| shikimate 5-dehydrogenase [Desulfotomaculum ruminis DSM 2154]
gi|334092988|gb|AEG61328.1| shikimate 5-dehydrogenase [Desulfotomaculum ruminis DSM 2154]
Length = 293
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 98/296 (33%), Positives = 148/296 (50%), Gaps = 25/296 (8%)
Query: 233 INPDTKIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLV--DDVKEFFRTYSGTDFA 290
+N TKI GL PV HS P +HN AF N +YVP + D +K+ ++ +
Sbjct: 6 LNGKTKICGLFGFPVEHSFSPAMHNAAFEELGLNWVYVPFCISPDRLKQAMQSITSLGLT 65
Query: 291 GFSVGIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALR 350
G +V +PHK+ + DE+HP A IGAVNTI+ G+LVG+NTD + ++ D
Sbjct: 66 GINVTVPHKQAVLPLLDEIHPTAGIIGAVNTIVND--QGRLVGHNTDGAGFVKSLTDE-- 121
Query: 351 ERQGINGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGARVIIFNRNYERAKALA--- 407
+ SP + +L G A A S + I NR+ +A+ALA
Sbjct: 122 ---------TGFSPRGQGVLILGAGGAARAVAVQLALSGAGPLYIANRSPAKAEALARDL 172
Query: 408 ---DAVSGEALHF--EYLHEFFPEKGMILANASAIGMEPNSDQSP-VPKEALKAYELVFD 461
V AL + E E E G+++ + +GM P ++Q P P +A++ ++V D
Sbjct: 173 QQATGVRAAALPWGRELPQEKVNEVGLVV-QTTPMGMAPKAEQCPDFPFQAIRTGQVVCD 231
Query: 462 AVYTPRNTRLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRKLVLEQ 517
+Y P T L+EAA GA ++G+ M + Q + F L+TG AP MR+ +L Q
Sbjct: 232 LIYNPGQTLFLKEAAVRGAVPLNGLGMLLYQGVLAFELWTGKTAPVAVMREALLRQ 287
>gi|427720930|ref|YP_007068924.1| shikimate dehydrogenase [Calothrix sp. PCC 7507]
gi|427353366|gb|AFY36090.1| shikimate dehydrogenase [Calothrix sp. PCC 7507]
Length = 301
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 88/296 (29%), Positives = 149/296 (50%), Gaps = 34/296 (11%)
Query: 237 TKIFGLVSNPVGHSKGPILHNPAFRHTR-------FNGIYVPMLVD--DVKEFFRTYSGT 287
TKI G++ +PV HS P++HN A + +Y+P ++ ++ ++
Sbjct: 10 TKILGVIGHPVEHSLSPLMHNAALAQMVEDIAQLGLDYVYLPFPIEPQNLAVAIAGFAAV 69
Query: 288 DFAGFSVGIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIED 347
GF+V IPHK+ + E+ PLA+S+GAVNT+ R+ + + VG NTD E I ++
Sbjct: 70 GVVGFNVTIPHKQAIIPLLSEISPLAQSVGAVNTVTRQ--NNQWVGTNTDVEGFIVPLQT 127
Query: 348 ALRERQGINGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRG-ARVIIFNRNYERAKAL 406
+ + KI V++G GGA RA+ G G A + I RN+E+ A
Sbjct: 128 TYHQDW------------SQKIAVILGNGGAARAVVAGCHQLGFAEIHIVGRNHEKLTAF 175
Query: 407 ADAVSGEALHFEY-LHEFFPEKGMI-----LANASAIGMEPNSDQSPVPKE---ALKAYE 457
++ S L+ +HE+ +I L N + IGM P + SP+ E +L
Sbjct: 176 RNSWSNSPLNENLQVHEWLELPKLIPQADLLVNTTPIGMYPKINDSPLSAEEMSSLSPNA 235
Query: 458 LVFDAVYTPRNTRLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLA-PEDFMRK 512
+ +D +Y P+ T+ L++A + GA + G+EM ++Q + +++ A P D MR+
Sbjct: 236 IAYDLIYIPQPTQFLQQAQKQGAITIDGLEMLVQQGVAALKIWLQREAIPVDVMRQ 291
>gi|326203602|ref|ZP_08193466.1| shikimate 5-dehydrogenase [Clostridium papyrosolvens DSM 2782]
gi|325986422|gb|EGD47254.1| shikimate 5-dehydrogenase [Clostridium papyrosolvens DSM 2782]
Length = 294
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 83/286 (29%), Positives = 142/286 (49%), Gaps = 29/286 (10%)
Query: 230 LEHINPDTKIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLVD--DVKEFFRTYSGT 287
+E +N T+++G++ NP+ H+K P +HN F+ NG+Y+P+LV+ +++ G
Sbjct: 4 VEFVNGKTQLYGVLGNPIEHTKSPFIHNTLFKKFGVNGVYLPVLVETGKLEQVMNGLKGI 63
Query: 288 DFAGFSVGIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIED 347
+F GF+V +P+K+ + DEV +GA+NT+ ++ +G+ +G NTD E + D
Sbjct: 64 NFLGFNVTVPYKKDVINYLDEVSAEGMLMGAINTVKKQ--NGRFIGSNTDAEGFVRDFCD 121
Query: 348 ALRERQGINGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRG-ARVIIFNRNYERAKAL 406
+ GK +L+GAGG RA+A G + I NR AK++
Sbjct: 122 GF------------GTTFKGKRVMLLGAGGTSRAIAVRLAMEGIEHLTIVNRTEANAKSI 169
Query: 407 ADAVSGEALHFEYLHEFFPEK---------GMILANASAIGMEPNSDQSPVPKE-ALKAY 456
++ V+G + + PEK I+ N + GM D +P +
Sbjct: 170 SNLVNGNFGNL--VSTMLPEKDKLDKAIENSQIVINTTPAGMSTYLDSTPFDIDFNFNGT 227
Query: 457 ELVFDAVYTPRNTRLLREAAEVGATVVSGVEMFIRQALGQFRLFTG 502
+LV+D +Y P+ TR L +A G + +G M I Q + F ++TG
Sbjct: 228 QLVYDVLYVPKKTRFLIQAENAGCKIRNGFGMLINQGVSSFEIWTG 273
>gi|150400882|ref|YP_001324648.1| shikimate 5-dehydrogenase [Methanococcus aeolicus Nankai-3]
gi|166219472|sp|A6UU64.1|AROE_META3 RecName: Full=Shikimate dehydrogenase
gi|150013585|gb|ABR56036.1| shikimate 5-dehydrogenase [Methanococcus aeolicus Nankai-3]
Length = 278
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 87/291 (29%), Positives = 151/291 (51%), Gaps = 23/291 (7%)
Query: 233 INPDTKIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLVD--DVKEFFRTYSGTDFA 290
IN TK+ GL+ +PV HS P +HN A + N +Y+ V+ ++K+ +
Sbjct: 2 INSKTKLLGLIGHPVEHSLSPTMHNEAIKDKDLNYVYLAFDVESENLKDVVNGAKAIGWK 61
Query: 291 GFSVGIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALR 350
GF++ IPHK + D++ AK IGAVNT+ + + K +GYNTD A +IE+ +
Sbjct: 62 GFNITIPHKIEIMKYLDKIDNDAKLIGAVNTV--KIENNKAIGYNTDGIGARLSIEEIIG 119
Query: 351 ERQGINGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGARVIIFNRNYERAKALADAV 410
E + N +++GAGG+ RA+ ++ + I NR E+A+ +A+ +
Sbjct: 120 EVKDYN-------------ILVIGAGGSSRAVCCEL-AKNNNLTIINRTVEKAEIIANDL 165
Query: 411 SGE---ALHFEYL-HEFFPEKGMILANASAIGMEPNSDQSP-VPKEALKAYELVFDAVYT 465
S + A+++ L H + I+ N +++GM PN D P + + +K +V D +Y
Sbjct: 166 SNKLNNAVYYGGLNHNYNMANFDIIINTTSLGMYPNVDNKPPISMQNIKKDAVVMDLIYN 225
Query: 466 PRNTRLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRKLVLE 516
P+ T L+EA E G ++G+ M I Q F ++TG + M+ +++
Sbjct: 226 PKETLFLKEAKEKGCATINGLGMLIYQGAKSFEIWTGVKPDINIMKNAIID 276
>gi|443309942|ref|ZP_21039617.1| shikimate 5-dehydrogenase [Synechocystis sp. PCC 7509]
gi|442779995|gb|ELR90213.1| shikimate 5-dehydrogenase [Synechocystis sp. PCC 7509]
Length = 291
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 86/293 (29%), Positives = 143/293 (48%), Gaps = 28/293 (9%)
Query: 233 INPDTKIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLV--DDVKEFFRTYSGTDFA 290
I TK+ G++ +PV HS PI+HN A H + +Y+P+ V D+++ ++ D
Sbjct: 5 ITGKTKLLGVIGHPVEHSLSPIMHNAAIAHLGLDYVYLPLPVHPDNLQAAISGFAAIDLV 64
Query: 291 GFSVGIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALR 350
GF++ IPHK+ E+ AK+IGA+NT+ R G NTD E I+ ++
Sbjct: 65 GFNITIPHKQAITPLITEISATAKAIGAINTVWRTS-SSIWAGTNTDVEGFITPLQ---- 119
Query: 351 ERQGINGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGAR-VIIFNRNYERAKALADA 409
++ + K +++G GGA RA+ G G + + RN + +
Sbjct: 120 ---------TYAQNWSEKTALVLGNGGAARAVVAGCAQLGFKETYVVGRNPTKLAEFIAS 170
Query: 410 VSGEAL-------HFEYLHEFFPEKGMILANASAIGMEPNSDQSPVPKEA---LKAYELV 459
AL ++ L P+ +I+ N + IGM PN +SP+ E L A +
Sbjct: 171 WGNSALATQLLVRSWDKLPLLIPQAKVII-NTTPIGMYPNVRESPLSDEEMGLLAADAIA 229
Query: 460 FDAVYTPRNTRLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRK 512
+D +YTP T+ L++A GAT + G+EM ++Q +++ AP D MR+
Sbjct: 230 YDLIYTPSPTKFLQQAQAKGATAIDGLEMLVQQGAAALKIWLQQPAPIDVMRQ 282
>gi|448310668|ref|ZP_21500466.1| shikimate 5-dehydrogenase [Natronolimnobius innermongolicus JCM
12255]
gi|445607408|gb|ELY61289.1| shikimate 5-dehydrogenase [Natronolimnobius innermongolicus JCM
12255]
Length = 269
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 108/283 (38%), Positives = 144/283 (50%), Gaps = 29/283 (10%)
Query: 238 KIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLVDD--VKEFFRTYSGTDFAGFSVG 295
+FGL+ NPVGHS P +H A+ + YV D +++ + G +V
Sbjct: 2 DVFGLIGNPVGHSLSPPMHEAAYDALEMDARYVTFEPDPDAIEDAIDGAAALGVTGLNVT 61
Query: 296 IPHKEPAVACCDEVHPLAKSIGAVNTII---RRPIDGKLVGYNTDCESAISAIEDALRER 352
IP K+ A+ C E PLA IGAVNTI RP G+NTD A+ ++ D
Sbjct: 62 IPFKQDALECV-EADPLASRIGAVNTIDFTGERP-----TGHNTDAGGALRSLRD----- 110
Query: 353 QGINGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGARVIIFNRNYERAKALADAV-- 410
H + G+ V+VGAGGAGRA+AFG A V I NR A LAD V
Sbjct: 111 --------HDVAVDGERAVVVGAGGAGRAIAFGLADADATVEIANRTESTAHELADDVPG 162
Query: 411 -SGEALHFEYLHEFFPEKGMILANASAIGMEPNSDQSPVPKEALKAYELVFDAVYTPRNT 469
+G L L + + IL NA+++GM+ + D++PVP AL V DAVY+P T
Sbjct: 163 ATGHGLESGTLADLLADAD-ILVNATSVGMD-DGDETPVPAAALHGELAVLDAVYSPLET 220
Query: 470 RLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRK 512
RLLREAA+ GAT + G M + Q + F +TG AP D M
Sbjct: 221 RLLREAADAGATTIDGAWMLLYQGVEAFEHWTGRDAPVDAMND 263
>gi|221310491|ref|ZP_03592338.1| shikimate 5-dehydrogenase [Bacillus subtilis subsp. subtilis str.
168]
gi|221314815|ref|ZP_03596620.1| shikimate 5-dehydrogenase [Bacillus subtilis subsp. subtilis str.
NCIB 3610]
gi|221319737|ref|ZP_03601031.1| shikimate 5-dehydrogenase [Bacillus subtilis subsp. subtilis str.
JH642]
gi|221324015|ref|ZP_03605309.1| shikimate 5-dehydrogenase [Bacillus subtilis subsp. subtilis str.
SMY]
gi|255767590|ref|NP_390444.2| shikimate 5-dehydrogenase [Bacillus subtilis subsp. subtilis str.
168]
gi|418032255|ref|ZP_12670738.1| shikimate 5-dehydrogenase [Bacillus subtilis subsp. subtilis str.
SC-8]
gi|430756355|ref|YP_007208894.1| shikimate dehydrogenase [Bacillus subtilis subsp. subtilis str.
BSP1]
gi|452915012|ref|ZP_21963638.1| shikimate dehydrogenase [Bacillus subtilis MB73/2]
gi|251757241|sp|P54374.2|AROE_BACSU RecName: Full=Shikimate dehydrogenase
gi|225185218|emb|CAB14508.2| shikimate 5-dehydrogenase [Bacillus subtilis subsp. subtilis str.
168]
gi|351471118|gb|EHA31239.1| shikimate 5-dehydrogenase [Bacillus subtilis subsp. subtilis str.
SC-8]
gi|407959814|dbj|BAM53054.1| shikimate 5-dehydrogenase [Bacillus subtilis BEST7613]
gi|407965389|dbj|BAM58628.1| shikimate 5-dehydrogenase [Bacillus subtilis BEST7003]
gi|430020875|gb|AGA21481.1| Shikimate dehydrogenase [Bacillus subtilis subsp. subtilis str.
BSP1]
gi|452115360|gb|EME05756.1| shikimate dehydrogenase [Bacillus subtilis MB73/2]
Length = 280
Score = 139 bits (350), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 94/286 (32%), Positives = 149/286 (52%), Gaps = 24/286 (8%)
Query: 238 KIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLV--DDVKEFFRTYSGTDFAGFSVG 295
K++G++ NP+GHS P +HN + + +G Y V +D+++ + G +V
Sbjct: 3 KLYGVIGNPIGHSMSPDIHNASLKDLGLDGHYHAFKVEENDLEDAVKGIRALGVQGINVT 62
Query: 296 IPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALRERQGI 355
+PHK + D + AK +GAVNT+ RR D KLVGYNTD E + ++ L +
Sbjct: 63 VPHKVSIMDYLDHIDESAKVLGAVNTV-RREGD-KLVGYNTDGEGFVKSLMKVLDK---- 116
Query: 356 NGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGA--RVIIFNRNYERAKALADAV--- 410
PI+ F+++GAGGA RA+ F R + I NR E+AK L +A
Sbjct: 117 --------PISELSFLMIGAGGAARAI-FTTIVRNTPKKFDICNRTLEKAKRLTEATPSF 167
Query: 411 -SGEALHFEYLHEFFPEKGMILANASAIGMEPNSDQSPVPKEALKAYELVFDAVYTPRNT 469
+ E L + E + +I+ + +++GM PN D P+ + + +V D VY P T
Sbjct: 168 HNKEVLSIKEAEERLEQYDVII-HTTSVGMYPNVDDVPLSLQRAASSAVVCDIVYNPIQT 226
Query: 470 RLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRKLVL 515
LL+EA++ G + GV MF+ QA F+L+TG + MR +V+
Sbjct: 227 ALLKEASQKGLKTLDGVGMFVEQAALSFQLWTGQEPNIEKMRSIVI 272
>gi|389853036|ref|YP_006355270.1| shikimate 5-dehydrogenase [Pyrococcus sp. ST04]
gi|388250342|gb|AFK23195.1| shikimate 5-dehydrogenase [Pyrococcus sp. ST04]
Length = 273
Score = 139 bits (350), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 92/287 (32%), Positives = 148/287 (51%), Gaps = 23/287 (8%)
Query: 233 INPDTKIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLV--DDVKEFFRTYSGTDFA 290
+N +TK++ ++ PV HS P++HN F+ N +YV V + +++ A
Sbjct: 1 MNGETKVYAVIGKPVRHSLSPVMHNALFKKYGINAVYVAFEVFPEQLRDAILGVRALGIA 60
Query: 291 GFSVGIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALR 350
G +V +PHKE + D+V P +K+I +VNT+I +G+L+GY TD A A+E
Sbjct: 61 GLNVTMPHKEKIIEYLDKVSPDSKAISSVNTVINS--NGELIGYTTDGTGARKALE---- 114
Query: 351 ERQGINGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGARVIIFNRNYERAKALAD-A 409
T+ ++ +L G AK + V++ NR E+A+AL
Sbjct: 115 ---------RFTNVEGSRVLILGAGGAGKAIAYELAKY--SDVVVLNRTPEKARALEKFG 163
Query: 410 VSGEALHFEYLHEFFPEKGMILANASAIGMEPNSDQSPVPKEALKAYELVFDAVYTPRNT 469
+ G+AL E L ++ E IL NA+++GM +S VPKE L+ +V D VY P T
Sbjct: 164 IKGDALTMENL-SYYIEWADILINATSVGM--GKYESLVPKELLREGLVVMDIVYKPIKT 220
Query: 470 RLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRKLVLE 516
+LL++A + G V G+ M + Q F+L+TG + MR++ LE
Sbjct: 221 KLLKDAEKAGCLTVDGLWMLVYQGAESFKLWTGIHPDVELMRRVALE 267
>gi|261349968|ref|ZP_05975385.1| shikimate dehydrogenase [Methanobrevibacter smithii DSM 2374]
gi|288860751|gb|EFC93049.1| shikimate dehydrogenase [Methanobrevibacter smithii DSM 2374]
Length = 281
Score = 139 bits (350), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 99/290 (34%), Positives = 145/290 (50%), Gaps = 28/290 (9%)
Query: 233 INPDTKIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLV--DDVKEFFRTYSGTDFA 290
IN TKI GL+ +PV HS P +HN AF + YVP V +++K +
Sbjct: 2 INGSTKIVGLIGHPVEHSFSPPMHNAAFEELGLDYAYVPFNVCPENLKSAILGAKSLNIK 61
Query: 291 GFSVGIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALR 350
GF+V IPHK + D++ +AK IGAVNTI + ++ GYNTD I AI
Sbjct: 62 GFNVTIPHKINVMKYLDKLDSIAKLIGAVNTIDFK----EMKGYNTDGIGCIKAI----- 112
Query: 351 ERQGINGVASHTSPIAGKIFVLVGAGGAGRALAFG-AKSRGARVIIFNRNYERAKALADA 409
+ I K V+ GAGGA RA++F A+ + I NR+ +AK+LA+
Sbjct: 113 ---------GEVTSIKDKNIVVAGAGGASRAISFYLARENPQSIHILNRDINKAKSLAED 163
Query: 410 VSGEAL----HFEYLHEF--FPEKGMILANASAIGMEPNSDQSPVPK-EALKAYELVFDA 462
V L F+ + + + IL + + +GM + ++ + K E + + +V D
Sbjct: 164 VKNSKLTDNVDFDSIDKIVGYVSDADILIDTTPVGMSSHVNEEAIVKAEDMHSDLVVNDI 223
Query: 463 VYTPRNTRLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRK 512
VY P T LL EA + GAT V G++M + Q F ++TG AP D M K
Sbjct: 224 VYNPNETVLLSEAIKAGATPVYGIKMLLYQGAESFEIWTGEKAPVDVMEK 273
>gi|410456866|ref|ZP_11310717.1| shikimate 5-dehydrogenase [Bacillus bataviensis LMG 21833]
gi|409927248|gb|EKN64391.1| shikimate 5-dehydrogenase [Bacillus bataviensis LMG 21833]
Length = 277
Score = 139 bits (349), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 93/288 (32%), Positives = 144/288 (50%), Gaps = 23/288 (7%)
Query: 238 KIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLV--DDVKEFFRTYSGTDFAGFSVG 295
K++ ++ +P+GHS P++ N F + + Y+P V +D+ + + GF+V
Sbjct: 3 KLYAVLGDPIGHSMSPVMLNDLFSFYQIDAHYLPFQVKTEDLGDAVKGLRAIGVGGFNVT 62
Query: 296 IPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALRERQGI 355
IPHK + D V LA SIGAVNT++ GKL+GYNTD + ++
Sbjct: 63 IPHKSTIIPFLDVVDELALSIGAVNTVVND--GGKLIGYNTDGPGFLRSLN--------- 111
Query: 356 NGVASHTSPIAGKIFVLVGAGGAGRALAFG-AKSRGARVIIFNRNYERAKAL-ADA---V 410
+ ++G+ +++GAGGA R + F AK + + I NR ERA L AD +
Sbjct: 112 ----PYVPSVSGQRILVIGAGGAARGIYFAMAKEKPLVIDIANRTLERAVNLIADCPYDI 167
Query: 411 SGEALHFEYLHEFFPEKGMILANASAIGMEPNSDQSPVPKEALKAYELVFDAVYTPRNTR 470
S +AL + E E +I+ + IGM P P+ + L +V D +Y P T+
Sbjct: 168 SSKALSLQEASEIIGEYDLII-QTTMIGMSPRMADQPLNLDNLAKQSIVCDIIYNPLETQ 226
Query: 471 LLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRKLVLEQF 518
LL++AA GA +GV+MF+ Q F +TG + MR VL Q
Sbjct: 227 LLQDAASKGARTQTGVDMFVYQGALAFEKWTGIFPDVERMRNNVLLQL 274
>gi|253574706|ref|ZP_04852046.1| shikimate 5-dehydrogenase [Paenibacillus sp. oral taxon 786 str.
D14]
gi|251845752|gb|EES73760.1| shikimate 5-dehydrogenase [Paenibacillus sp. oral taxon 786 str.
D14]
Length = 301
Score = 139 bits (349), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 95/288 (32%), Positives = 141/288 (48%), Gaps = 24/288 (8%)
Query: 239 IFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLV--DDVKEFFRTYSGTDFAGFSVGI 296
+ G++ +P+ HSK P++H A + G Y+P V + ++E R F G +V +
Sbjct: 28 LLGVIGDPIQHSKSPVMHTAALQACGLTGAYLPFHVKGNRLEEAIRGIRALGFRGINVTV 87
Query: 297 PHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAI-EDALRERQGI 355
PHK + D + A+ IGAVNTI+ DG L GYNTD I ++ E+A E
Sbjct: 88 PHKVEVMNYLDHIDESARLIGAVNTIVND--DGVLTGYNTDGIGYIRSLKEEAAPE---- 141
Query: 356 NGVASHTSPIAGKIFVLVGAGGAGRALAFGA-KSRGARVIIFNRNYERAKALADAVSG-- 412
+ GK +++G GGA R + + + RV I NR E+A+ LA SG
Sbjct: 142 ---------LKGKRVLVLGCGGAARGIVYALLQEEPGRVTIANRTGEKAQELAAEWSGLG 192
Query: 413 --EALHFEYLHEFFPEKGMILANASAIGMEPNSDQSPVPKEALKAYELVFDAVYTPRNTR 470
+ L E PE +I+ N +++GM P+ P+ + +V D +Y P T
Sbjct: 193 SLTGCGMDELAEVLPEVDLII-NTTSVGMHPHVSDCPLDARLIPEGIVVSDLIYNPLKTE 251
Query: 471 LLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRKLVLEQF 518
LL +A G T+ SG+ MFI Q F +TG +AP MR VLE
Sbjct: 252 LLVQAEAKGCTIHSGLGMFIYQGAYAFERWTGLIAPVGAMRAAVLESM 299
>gi|167768014|ref|ZP_02440067.1| hypothetical protein CLOSS21_02557 [Clostridium sp. SS2/1]
gi|317498392|ref|ZP_07956687.1| shikimate 5-dehydrogenase [Lachnospiraceae bacterium 5_1_63FAA]
gi|167710343|gb|EDS20922.1| shikimate dehydrogenase [Clostridium sp. SS2/1]
gi|316894286|gb|EFV16473.1| shikimate 5-dehydrogenase [Lachnospiraceae bacterium 5_1_63FAA]
Length = 291
Score = 139 bits (349), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 97/297 (32%), Positives = 148/297 (49%), Gaps = 31/297 (10%)
Query: 232 HINPDTKIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLV--DDVKEFFRTYSGTDF 289
I+ TK+FGL+ +PV HS P + N F+ +G Y+ + ++V EF ++ +
Sbjct: 4 RISGTTKLFGLIGSPVSHSASPAMQNYGFQACGVDGAYLAFDIKEEEVPEFVKSMRLLNI 63
Query: 290 AGFSVGIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDAL 349
G +V +P+K A DE+ P A+ IGAVNTI+ R DGKL G+ TD E ++ ++D
Sbjct: 64 QGCNVTMPNKTAAAQNMDELSPAAELIGAVNTIVNR--DGKLYGHITDGEGFVANLKD-- 119
Query: 350 RERQGINGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGARVI-IFNRN---YERAKA 405
H + GK V+ GAGGA A+ GA+ I IFN +ERA+
Sbjct: 120 -----------HGIGVEGKDIVIFGAGGAATAIQVQCALDGAKSITIFNPRDPFFERAQK 168
Query: 406 LADAVSGEALHFEY-LHEFFPEKGM--------ILANASAIGMEPNSDQSPVPKEALKAY 456
+ + + + + L++ + M IL N + +GM+P D + + +
Sbjct: 169 MVEKIKAKVPECQVELYDLDAKDTMREKIDAADILVNGTLLGMKPKEDTTVISDTTMFHE 228
Query: 457 ELVF-DAVYTPRNTRLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRK 512
LV D VY P TR LREA E G V G M + Q + F+LFTG P D +++
Sbjct: 229 GLVVADVVYNPEETRFLREAKEHGCITVPGKGMLLWQGVASFKLFTGKDMPVDEVKE 285
>gi|321312051|ref|YP_004204338.1| shikimate 5-dehydrogenase [Bacillus subtilis BSn5]
gi|320018325|gb|ADV93311.1| shikimate 5-dehydrogenase [Bacillus subtilis BSn5]
Length = 280
Score = 139 bits (349), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 94/286 (32%), Positives = 149/286 (52%), Gaps = 24/286 (8%)
Query: 238 KIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLV--DDVKEFFRTYSGTDFAGFSVG 295
K++G++ NP+GHS P +HN + + +G Y V +D+++ + G +V
Sbjct: 3 KLYGVIGNPIGHSMSPDIHNASLKDLGLDGHYHAFKVEENDLEDAVKGIRALGVQGINVT 62
Query: 296 IPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALRERQGI 355
+PHK + D + AK +GAVNT+ RR D KLVGYNTD E + ++ L +
Sbjct: 63 VPHKISIMDYLDHIDESAKLLGAVNTV-RREGD-KLVGYNTDGEGFVKSLMKVLDK---- 116
Query: 356 NGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGA--RVIIFNRNYERAKALADAV--- 410
PI+ F+++GAGGA RA+ F R + I NR E+AK L +A
Sbjct: 117 --------PISELSFLMIGAGGAARAI-FTTIVRNTPKKFDICNRTLEKAKRLTEATPSF 167
Query: 411 -SGEALHFEYLHEFFPEKGMILANASAIGMEPNSDQSPVPKEALKAYELVFDAVYTPRNT 469
+ E L + E + +I+ + +++GM PN D P+ + + +V D VY P T
Sbjct: 168 HNKEVLSIKEAEERLEQYDVII-HTTSVGMYPNVDDVPLSLQRAASSAVVCDIVYNPIQT 226
Query: 470 RLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRKLVL 515
LL+EA++ G + GV MF+ QA F+L+TG + MR +V+
Sbjct: 227 ALLKEASQKGLKTLDGVGMFVEQAALSFQLWTGQEPDIEKMRSIVI 272
>gi|449095061|ref|YP_007427552.1| shikimate 5-dehydrogenase [Bacillus subtilis XF-1]
gi|449028976|gb|AGE64215.1| shikimate 5-dehydrogenase [Bacillus subtilis XF-1]
Length = 280
Score = 139 bits (349), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 94/286 (32%), Positives = 148/286 (51%), Gaps = 24/286 (8%)
Query: 238 KIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLV--DDVKEFFRTYSGTDFAGFSVG 295
K++G++ NP+GHS P +HN + + +G Y V +D++ + G +V
Sbjct: 3 KLYGVIGNPIGHSMSPDIHNASLKDLGLDGHYHAFKVEENDLENAVKGIRALGVQGINVT 62
Query: 296 IPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALRERQGI 355
+PHK + D + AK +GAVNT+ RR D KLVGYNTD E + ++ L +
Sbjct: 63 VPHKVSIMDYLDHIDESAKVLGAVNTV-RREGD-KLVGYNTDGEGFVKSLMKVLDK---- 116
Query: 356 NGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGA--RVIIFNRNYERAKALADAV--- 410
PI+ F+++GAGGA RA+ F R + I NR E+AK L +A
Sbjct: 117 --------PISELSFLMIGAGGAARAI-FTTIVRNTPKKFDICNRTLEKAKRLTEATPSF 167
Query: 411 -SGEALHFEYLHEFFPEKGMILANASAIGMEPNSDQSPVPKEALKAYELVFDAVYTPRNT 469
+ E L + E + +I+ + +++GM PN D P+ + + +V D VY P T
Sbjct: 168 HNKEVLSIKEAEERLEQYDVII-HTTSVGMYPNVDDVPLSLQRAASSAVVCDIVYNPIQT 226
Query: 470 RLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRKLVL 515
LL+EA++ G + GV MF+ QA F+L+TG + MR +V+
Sbjct: 227 ALLKEASQKGLKTLDGVGMFVEQAALSFQLWTGQEPDIEKMRSIVI 272
>gi|1303789|dbj|BAA12445.1| AroD [Bacillus subtilis]
Length = 280
Score = 139 bits (349), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 92/285 (32%), Positives = 149/285 (52%), Gaps = 22/285 (7%)
Query: 238 KIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLV--DDVKEFFRTYSGTDFAGFSVG 295
K++G++ NP+GHS P +HN + + +G Y V +D+++ + G +V
Sbjct: 3 KLYGVIGNPIGHSMSPDIHNASLKDLGLDGHYHAFKVEENDLEDAVKGIRALGVQGINVT 62
Query: 296 IPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALRERQGI 355
+PHK + D + AK +GAVNT+ RR D KLVGYNTD E + ++ L +
Sbjct: 63 VPHKVSIMDYLDHIDESAKVLGAVNTV-RREGD-KLVGYNTDGEGFVKSLMKVLDK---- 116
Query: 356 NGVASHTSPIAGKIFVLVGAGGAGRAL-AFGAKSRGARVIIFNRNYERAKALADAV---- 410
PI+ F+++GAGGA RA+ ++ + I NR E+AK L +A
Sbjct: 117 --------PISELSFLMIGAGGAARAIFTTFVRNTPKKFDICNRTLEKAKRLTEATPSFH 168
Query: 411 SGEALHFEYLHEFFPEKGMILANASAIGMEPNSDQSPVPKEALKAYELVFDAVYTPRNTR 470
+ E L + E + +I+ + +++GM PN D P+ + + +V D VY P T
Sbjct: 169 NKEVLSIKEAEERLEQYDVII-HTTSVGMYPNVDDVPLSLQRAASSAVVCDIVYNPIQTA 227
Query: 471 LLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRKLVL 515
LL+EA++ G + GV MF+ QA F+L+TG + MR +V+
Sbjct: 228 LLKEASQKGLKTLDGVGMFVEQAALSFQLWTGQEPNIEKMRSIVI 272
>gi|57640200|ref|YP_182678.1| shikimate 5-dehydrogenase [Thermococcus kodakarensis KOD1]
gi|73914165|sp|Q5JFT1.1|AROE_PYRKO RecName: Full=Shikimate dehydrogenase
gi|57158524|dbj|BAD84454.1| Shikimate 5-dehydrogenase [Thermococcus kodakarensis KOD1]
Length = 272
Score = 139 bits (349), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 101/286 (35%), Positives = 156/286 (54%), Gaps = 23/286 (8%)
Query: 234 NPDTKIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLV--DDVKEFFRTYSGTDFAG 291
+ +T+++G++ P HS P++HN AFR N +Y+ V +++ E +G
Sbjct: 3 DAETRLYGVIGFPARHSLSPVMHNAAFRALGINAVYLAFEVPPEELGEAIGGAKALGISG 62
Query: 292 FSVGIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALRE 351
+V +PHKE + D + + IG+VNT++ R G+L G+ TD A A+E A+
Sbjct: 63 LNVTMPHKEAVIHFLDSLSEDSGEIGSVNTVVNR--KGRLEGHTTDGLGARRALERAIE- 119
Query: 352 RQGINGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGARVIIFNRNYERAKALAD-AV 410
+ G+ +++GAGGAG+A+A+ SR V++ NR E+AKAL +
Sbjct: 120 -------------LGGRRILIIGAGGAGKAIAY-ELSRDNEVVVLNRTPEKAKALERFGI 165
Query: 411 SGEALHFEYLHEFFPEKGMILANASAIGMEPNSDQSPVPKEALKAYELVFDAVYTPRNTR 470
+G+AL+ E L E+ E +L NA+++GM NS ++PVP E L+ +V D VY P TR
Sbjct: 166 TGDALNRENLGEYL-EWAEVLINATSVGM--NSWETPVPAELLRRDLVVMDIVYKPLKTR 222
Query: 471 LLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRKLVLE 516
LL EA G V G+ M + Q + FRL+TG E MR LE
Sbjct: 223 LLTEAELRGCKTVDGLWMLVYQGIESFRLWTGFKPDEGLMRGAALE 268
>gi|375082963|ref|ZP_09730003.1| shikimate 5-dehydrogenase [Thermococcus litoralis DSM 5473]
gi|374742310|gb|EHR78708.1| shikimate 5-dehydrogenase [Thermococcus litoralis DSM 5473]
Length = 272
Score = 139 bits (349), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 103/289 (35%), Positives = 157/289 (54%), Gaps = 29/289 (10%)
Query: 234 NPDTKIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYV-----PMLVDDVKEFFRTYSGTD 288
+ +T+++G++ PV HS P++HN AF+ N IY+ P + D E R
Sbjct: 3 DAETRLYGVIGFPVRHSLSPVMHNAAFKALGINAIYLAFEVPPERLGDAMEGVRALG--- 59
Query: 289 FAGFSVGIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDA 348
+G +V +PHKE + D + + IG+VNT++ R GKL G+ TD A A+E A
Sbjct: 60 ISGLNVTMPHKEAVIHFLDSLSEDSGEIGSVNTVVNR--KGKLEGHTTDGLGARRALERA 117
Query: 349 LRERQGINGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGARVIIFNRNYERAKALAD 408
+ + G+ +++GAGGAG+A+A+ S+ V++ NR E+AKAL
Sbjct: 118 IE--------------LGGRRILIIGAGGAGKAIAY-ELSKDNEVVVLNRTPEKAKALER 162
Query: 409 -AVSGEALHFEYLHEFFPEKGMILANASAIGMEPNSDQSPVPKEALKAYELVFDAVYTPR 467
+ GEAL+ E L ++ E +L NA+++GM NS ++PVP E L+ +V D VY P
Sbjct: 163 FGIMGEALNRENLGKYL-EWAEVLINATSVGM--NSWETPVPGEMLRKDLVVMDIVYKPL 219
Query: 468 NTRLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRKLVLE 516
TRLL EA +G V G+ M + Q + F+L+TG E MR LE
Sbjct: 220 KTRLLTEAELMGCKTVDGLWMLVYQGIESFKLWTGFKPDEGLMRGAALE 268
>gi|428775357|ref|YP_007167144.1| shikimate dehydrogenase [Halothece sp. PCC 7418]
gi|428689636|gb|AFZ42930.1| shikimate dehydrogenase [Halothece sp. PCC 7418]
Length = 283
Score = 139 bits (349), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 86/292 (29%), Positives = 144/292 (49%), Gaps = 28/292 (9%)
Query: 233 INPDTKIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLVD--DVKEFFRTYSGTDFA 290
I TK+ G++ +PV HS P++HN H + +Y+P+ V D++ ++ D
Sbjct: 2 ITGKTKLLGVIGDPVEHSLSPVMHNAVLNHLGLDYVYLPLPVKKGDLERALAGFTAIDLV 61
Query: 291 GFSVGIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALR 350
GF+ IPHK+ + + + P A+ +GAVNT+ R + G NTD + I+ ++ +
Sbjct: 62 GFNATIPHKQAIIPYLNRITPEAQQVGAVNTVWRT--EAGWEGTNTDVDGFIAPLKSLDQ 119
Query: 351 ERQGINGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRG-ARVIIFNRNYERAKALADA 409
+ S+ +P V++G GGA RA+ G G + + + RN E+ + +
Sbjct: 120 DW-------SNITP------VILGNGGAARAVIVGCAKLGCSEIAVVGRNQEKLEQFKSS 166
Query: 410 VSGEALHF---EYLHEFFPE---KGMILANASAIGMEPNSDQSPVPKEALKAY---ELVF 460
+ + YL E P + +L N + IGM P++D SPV +E LK + +
Sbjct: 167 WANTGVSAAIKTYLWEELPHLVSQTQLLVNTTPIGMSPDADASPVEREILKELPNCAIAY 226
Query: 461 DAVYTPRNTRLLREAAE-VGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMR 511
D +YTPR TRLL+ A + A G+EM I+Q ++ P + MR
Sbjct: 227 DLIYTPRPTRLLQLAQDNANAVTFDGLEMLIQQGAAALEIWLQQPIPVEIMR 278
>gi|57234701|ref|YP_181209.1| shikimate 5-dehydrogenase [Dehalococcoides ethenogenes 195]
gi|123618900|sp|Q3Z990.1|AROE_DEHE1 RecName: Full=Shikimate dehydrogenase
gi|57225149|gb|AAW40206.1| shikimate 5-dehydrogenase [Dehalococcoides ethenogenes 195]
Length = 286
Score = 138 bits (348), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 92/288 (31%), Positives = 144/288 (50%), Gaps = 27/288 (9%)
Query: 235 PDTKIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLV--DDVKEFFRTYSGTDFAGF 292
PD +FGL+ PV HS P + N AF+H + + +Y+ + ++++ + + G
Sbjct: 5 PDA-LFGLIGFPVSHSVSPAMQNAAFKHCKLDYLYLTIAAKPEELQNVIASMGPLNIRGL 63
Query: 293 SVGIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALRER 352
+V IPHK + D + P A+ IGAVNTI+ +G+L GYNTD + +E
Sbjct: 64 NVTIPHKIEVIKYIDSLDPAAEKIGAVNTIVNE--NGRLKGYNTDFGGFVRLLEH----- 116
Query: 353 QGINGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGARVIIFNRNYERAKALADAV-- 410
N +A A + F L+GAGG+ A+A + G + + R E+AK LA +
Sbjct: 117 ---NRIAP-----AKQRFTLLGAGGSAHAIALAVCNLGGHLTVLARQEEKAKDLAGKMCL 168
Query: 411 ------SGEALHFEYLHEFFPEKGMILANASAIGMEPNSDQSPVPKEALKAYELVFDAVY 464
G L+ L E + +I+ N + +GM + QS VP L+ V DA+Y
Sbjct: 169 RLSGKTQGLELNDTNLEEALADTDVIV-NCTPVGMGNLAGQSLVPPRLLRPDLTVIDAIY 227
Query: 465 TPRNTRLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRK 512
P TRLL +A + GA +++G+EM + Q F ++T AP M K
Sbjct: 228 NPCKTRLLEDAEKRGARIINGLEMLVWQGAMSFEIWTNQKAPFRLMMK 275
>gi|337748424|ref|YP_004642586.1| shikimate 5-dehydrogenase [Paenibacillus mucilaginosus KNP414]
gi|336299613|gb|AEI42716.1| shikimate 5-dehydrogenase [Paenibacillus mucilaginosus KNP414]
Length = 299
Score = 138 bits (348), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 104/294 (35%), Positives = 156/294 (53%), Gaps = 23/294 (7%)
Query: 233 INPDTKIFGLVSNPVGHSKGPILHNPAFRHTRFNGIY--VPMLVDDVKEFFRTYSGTDFA 290
++ T ++G+ +PV HSK P++ N AF N Y +L +K+ F
Sbjct: 12 LDSHTILYGVFGDPVRHSKSPVMLNRAFDVAGINAAYGAFHILPGTLKDAVAGIRALGFR 71
Query: 291 GFSVGIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALR 350
G +V +PHK ++ DE+ A+ IGAVNT++ G+L+GYNTD I + L+
Sbjct: 72 GVNVTVPHKLEVMSYLDEIDEGARVIGAVNTVVNE--GGRLIGYNTDGIGYIRS----LK 125
Query: 351 ERQGINGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGA-RVIIFNRNYERAKALADA 409
E GI + G+ +++GAGGA R + + GA + I NR E+A LADA
Sbjct: 126 EETGIE--------LKGRKVLMIGAGGAARGVGYALAQEGAEHIYIANRTKEKALDLADA 177
Query: 410 VSG----EALHFEYLHEFFPEKGMILANASAIGMEPNSDQSPVPKEALKAYELVFDAVYT 465
+ G + +HE + +I+ N + +GM PN D+ P+ ++ ++V D +Y
Sbjct: 178 LGGYGSISGHGLDEIHELVGDAALIVNN-TLVGMYPNVDEVPMDISLIREDQVVSDLIYN 236
Query: 466 PRNTRLLREAAEV-GATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRKLVLEQF 518
P TRLLREA E+ GATV SG+ MFI Q F +TG AP + MRK VL+ F
Sbjct: 237 PLETRLLREAREMRGATVHSGLGMFIYQGAYAFEYWTGQPAPVEAMRKAVLDSF 290
>gi|428768969|ref|YP_007160759.1| shikimate dehydrogenase [Cyanobacterium aponinum PCC 10605]
gi|428683248|gb|AFZ52715.1| shikimate dehydrogenase [Cyanobacterium aponinum PCC 10605]
Length = 287
Score = 138 bits (348), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 89/298 (29%), Positives = 144/298 (48%), Gaps = 28/298 (9%)
Query: 232 HINPDTKIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLVD--DVKEFFRTYSGTDF 289
I TK+ G++ NP+ HS P+ N A + IYVP V+ +++E F T+
Sbjct: 2 QITGKTKLLGIIGNPIEHSMSPVFQNSAIASLNLDYIYVPFAVEKENLQELFNTFKAVKI 61
Query: 290 AGFSVGIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDAL 349
GF+V IPHKE + D + AK IGAVNT+ + + G NTD + IS ++
Sbjct: 62 RGFNVTIPHKENVLPFLDYITETAKIIGAVNTVWLTE-NNQWHGTNTDIDGFISPLKSLD 120
Query: 350 RERQGINGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGARVI-IFNRNYERAKALAD 408
+ I +P+ ++G GGA RA+ G G R I I RN ++ K
Sbjct: 121 KNWANI-------TPL------VLGNGGASRAVIVGCSELGCREIKIVGRNLDKLKQFKA 167
Query: 409 AVSGEALH-------FEYLHEFFPEKGMILANASAIGMEPNSDQSPVPKEALKAY---EL 458
+ + L ++ L + P +I+ N + +GM P+ QSP+ + +
Sbjct: 168 SFANTTLKAEISIYTWDELTDLIPHSQLIV-NTTPMGMYPHISQSPLTSSQAQLICEDAI 226
Query: 459 VFDAVYTPRNTRLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRKLVLE 516
+D +Y PR T L++A + GA ++ G EM ++Q F ++T AP MR+ +L+
Sbjct: 227 AYDLIYNPRPTLFLQQAEKQGAKIIDGSEMLVQQGAVAFEIWTHHPAPVAVMRESLLQ 284
>gi|300087348|ref|YP_003757870.1| shikimate 5-dehydrogenase [Dehalogenimonas lykanthroporepellens
BL-DC-9]
gi|299527081|gb|ADJ25549.1| shikimate 5-dehydrogenase [Dehalogenimonas lykanthroporepellens
BL-DC-9]
Length = 276
Score = 138 bits (348), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 88/262 (33%), Positives = 129/262 (49%), Gaps = 20/262 (7%)
Query: 245 NPVGHSKGPILHNPAFRHTRFNGIYVPMLVD--DVKEFFRTYSGTDFAGFSVGIPHKEPA 302
+PV HS P +HN A + +Y+ V + G ++ IPHK A
Sbjct: 14 DPVAHSVSPAMHNAAIDRLGLDYVYLAFRVTPAGLAGALNGVRALGIRGVNLTIPHKTAA 73
Query: 303 VACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALRERQGINGVASHT 362
+ DEV A+ +GAVNT++ G+L GYNTD ++A++ H
Sbjct: 74 LGLLDEVDEAARRVGAVNTVVNDA--GRLTGYNTDIAGFLAALK-------------KHG 118
Query: 363 SPIAGKIFVLVGAGGAGRALAFGAKSRGARVIIFNRNYERAKALADAVSGEALHFEY--L 420
AG+ V++GAGGA RA+ F + GA V+I NR+ E+A LA A+ L
Sbjct: 119 FAPAGQKAVVLGAGGAARAVVFALRDAGAEVVIANRSIEKADTLAADTGATAVSTTETEL 178
Query: 421 HEFFPEKGMILANASAIGMEPNSDQSPVPKEALKAYELVFDAVYTPRNTRLLREAAEVGA 480
+ G+ L NA+ +G+ P++ +PVP L VFD +Y PR TRLL EA G
Sbjct: 179 QKALDGAGL-LVNATPVGLFPDTGVTPVPGSLLHPGLTVFDTIYRPRRTRLLTEAEAAGC 237
Query: 481 TVVSGVEMFIRQALGQFRLFTG 502
V+ G++M + Q F L+TG
Sbjct: 238 RVIDGLDMLVEQGATAFELWTG 259
>gi|147669087|ref|YP_001213905.1| shikimate 5-dehydrogenase [Dehalococcoides sp. BAV1]
gi|189046312|sp|A5FRZ5.1|AROE_DEHSB RecName: Full=Shikimate dehydrogenase
gi|146270035|gb|ABQ17027.1| shikimate dehydrogenase [Dehalococcoides sp. BAV1]
Length = 286
Score = 138 bits (347), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 92/288 (31%), Positives = 142/288 (49%), Gaps = 27/288 (9%)
Query: 235 PDTKIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLV--DDVKEFFRTYSGTDFAGF 292
PD +FG++ PV HS P + N AF+H + N +Y+ + +D++ + + G
Sbjct: 5 PDA-LFGIIGYPVSHSVSPAMQNAAFKHCKLNYLYLTIAAKPEDLQNVIASMRPLNIRGL 63
Query: 293 SVGIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALRER 352
+V IPHK + D + P AK IGAVNTI+ +G++ GYNTD + +E
Sbjct: 64 NVTIPHKIEVIKYIDTLDPAAKKIGAVNTIVNE--NGQMKGYNTDFGGFVRLLEH----- 116
Query: 353 QGINGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGARVIIFNRNYERAKALADAV-- 410
N +A A F L+GAGG+ A++ + G + + R E+AK LA +
Sbjct: 117 ---NRIAP-----AKHRFALLGAGGSAHAISLAICTLGGHLTVLARQEEKAKDLAAKMCL 168
Query: 411 ------SGEALHFEYLHEFFPEKGMILANASAIGMEPNSDQSPVPKEALKAYELVFDAVY 464
G L+ L E E +I+ N + IGM + QS + L+ V DA+Y
Sbjct: 169 RFKGKAQGLELNEANLEETLAESDIIV-NCTPIGMGNLAGQSLISPRLLRPDLTVIDAIY 227
Query: 465 TPRNTRLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRK 512
P TRLL +A + GA +++G+EM + Q F ++T AP M K
Sbjct: 228 NPCKTRLLEDAEKKGAKIINGLEMLVWQGAMSFEIWTSQKAPFRVMMK 275
>gi|332298817|ref|YP_004440739.1| 3-dehydroquinate dehydratase [Treponema brennaborense DSM 12168]
gi|332181920|gb|AEE17608.1| 3-dehydroquinate dehydratase [Treponema brennaborense DSM 12168]
Length = 501
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 115/375 (30%), Positives = 169/375 (45%), Gaps = 35/375 (9%)
Query: 145 IACMQATGADVMKLEIAVDSITDLAPVF-EMLTHCQVPLIALAVGSRGLISQLLGPKFGG 203
+A M+ TG ++ KL S++D+ +F E + I A+G GL S++L +
Sbjct: 144 LAKMRTTGFEIPKLACMPHSLSDVTHMFAEAASLADSEHILCAMGPLGLPSRILAGRLHS 203
Query: 204 FLVYGS----LGGKSVPGLPTLVSLKQVYQLEHINPDTKIFGLVSNPVGHSKGPILHNPA 259
FL Y S GG G V+L ++Y I+ +TK++G+ P+ + P +HN
Sbjct: 204 FLTYTSPKEPTGGMQQIGHIDPVTLNEIYNFRAIDANTKLYGITGYPLAATDSPRIHNEG 263
Query: 260 FRHTRFNGIYVPMLVDDVKEFFRTYSGTDFAGFSVGIPHKEPAVACCDEVHPLAKSIGAV 319
+R N YVP+ V E + T G SV IPHKE + +V I A
Sbjct: 264 YRKHGMNAAYVPVRAATVSEALEFAAETGIQGLSVTIPHKEKVLEYLPQVSAEVGEIDAC 323
Query: 320 NTIIRRPIDGKLVGYNTDCESAISAIEDALRERQGINGVASHTSPIAGKIFVLVGAGGAG 379
NTI+R D GYNTD A+ D + + +A ++G+GGA
Sbjct: 324 NTIVRTESD--WFGYNTDAYGLSRAVCDFMNVKN-----------LAHCKVAIIGSGGAA 370
Query: 380 RALAFGAKSRGARVIIFNRNYERAKALADAVSGEALHFEYLHEFFPEKGMILANASAI-- 437
+A AF K + IFNR +AK +A E +F++ PE +L S +
Sbjct: 371 KAAAFAVKQLRGKACIFNRTVSKAKQIA-----ENFNFKWA-PLGPESADLLEKYSDLII 424
Query: 438 -----GM---EPNSDQS-PVPKEALKAYELVFDAVYTPRNTRLLREAAEVGATVVSGVEM 488
GM P ++Q+ P+ K YE V+D VY P T ++ A G V +G M
Sbjct: 425 QTTPKGMGAAPPATEQNDPIFFYDFKGYEAVYDVVYVPEITPVMARAKAAGCKVSNGHTM 484
Query: 489 FIRQALGQFRLFTGG 503
QA QF LFTG
Sbjct: 485 LEYQAYKQFELFTGA 499
>gi|429761248|ref|ZP_19293678.1| shikimate dehydrogenase [Anaerostipes hadrus DSM 3319]
gi|429184272|gb|EKY25295.1| shikimate dehydrogenase [Anaerostipes hadrus DSM 3319]
Length = 291
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 96/297 (32%), Positives = 148/297 (49%), Gaps = 31/297 (10%)
Query: 232 HINPDTKIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLV--DDVKEFFRTYSGTDF 289
I+ TK+FGL+ +PV HS P + N F+ +G Y+ + ++V EF ++ +
Sbjct: 4 RISGTTKLFGLIGSPVSHSASPAMQNYGFQACGVDGAYLAFDIKEEEVPEFVKSMRLLNI 63
Query: 290 AGFSVGIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDAL 349
G +V +P+K A DE+ P A+ IGAVNTI+ R DGKL G+ TD E ++ ++D
Sbjct: 64 QGCNVTMPNKTAAAQNMDELSPAAELIGAVNTIVNR--DGKLYGHITDGEGFVANLKD-- 119
Query: 350 RERQGINGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGARVI-IFNRN---YERAKA 405
H + GK V+ GAGGA A+ GA+ I IFN +ERA+
Sbjct: 120 -----------HGIGVEGKDIVIFGAGGAATAIQVQCALDGAKSITIFNPRDPFFERAQK 168
Query: 406 LADAVSGEALHFEY-LHEFFPEKGM--------ILANASAIGMEPNSDQSPVPKEALKAY 456
+ + + + + L++ + M IL N + +GM+P D + + +
Sbjct: 169 MVEKIKAKVPECQVELYDLDAKDTMREKIDAADILVNGTLLGMKPKEDTTVISDTTMFHE 228
Query: 457 ELVF-DAVYTPRNTRLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRK 512
LV D VY P T+ LREA E G V G M + Q + F+LFTG P D +++
Sbjct: 229 GLVVADVVYNPEETKFLREAKEHGCITVPGKGMLLWQGVASFKLFTGKDMPVDEVKE 285
>gi|304314453|ref|YP_003849600.1| shikimate 5-dehydrogenase [Methanothermobacter marburgensis str.
Marburg]
gi|302587912|gb|ADL58287.1| shikimate 5-dehydrogenase [Methanothermobacter marburgensis str.
Marburg]
Length = 297
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 105/294 (35%), Positives = 150/294 (51%), Gaps = 24/294 (8%)
Query: 233 INPDTKIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLV--DDVKEFFRTYSGTDFA 290
I +T++ G++ P+ HS P +HN AF+ + YVP V ++E R +
Sbjct: 17 ITGNTQLTGIIGYPLTHSLSPQMHNAAFKALGMDWAYVPFPVKPSGLEEAVRGLRALNVR 76
Query: 291 GFSVGIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALR 350
G +V IPHKE + EV A IGAVNT+ + D ++GYNTD + A+E+
Sbjct: 77 GVNVTIPHKESVLEYIGEVDETASLIGAVNTL--KFEDETIMGYNTDASGCLRALEE--- 131
Query: 351 ERQGINGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGARVIIFNRNYERAKALADAV 410
+ + G +++GAGGA RA AF RGA V I NR ERA+ALA+ +
Sbjct: 132 -----------VTSVDGSSVIILGAGGAARACAFQLAVRGASVTILNRTPERARALAEDI 180
Query: 411 SGEA-LHFEYL-HEFFP---EKGMILANASAIGMEPNSDQSPVPKEALKAYELV-FDAVY 464
G + +Y +E P E IL + + +GM P+ D P+ K L LV +D VY
Sbjct: 181 KGALDIRVKYGGYELIPACVEGADILIDTTPVGMYPHMDDEPLVKAELMHEGLVVYDLVY 240
Query: 465 TPRNTRLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRKLVLEQF 518
P T LLREA GA VSG+ M + Q FR+++G P D M K +L+
Sbjct: 241 NPPETCLLREARAAGAVPVSGLRMLLYQGAEAFRIWSGREPPLDVMEKALLDAL 294
>gi|145577901|gb|ABP82669.1| shikimate 5-dehydrogenase [Bacillus mycoides]
Length = 238
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 88/253 (34%), Positives = 133/253 (52%), Gaps = 26/253 (10%)
Query: 250 SKGPILHNPAFRHTRFNGIYVPMLVDD--VKEFFRTYSGTDFAGFSVGIPHKEPAVACCD 307
S P++HN AF H + Y LV++ + E + +GF+V PHK + D
Sbjct: 1 SLSPLMHNDAFEHLNIDAHYHAFLVEEETLGEAVKGLKALGVSGFNVTTPHKVSIMKYLD 60
Query: 308 EVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALRERQGINGVASHTSPIAG 367
E+ PLAK IGAVNT++ R DGKL+GYNTD + +++ +E P+
Sbjct: 61 EIDPLAKQIGAVNTVVHR--DGKLIGYNTDGIGYVRSLQSISKE------------PLYQ 106
Query: 368 KIFVLVGAGGAGRALAFGAKSRGARVI-IFNRNYERAKALADA----VSGEALHFEYLHE 422
K +L+GAGGA RA+ F G + I I NR E+A L ++ +AL E E
Sbjct: 107 KRILLLGAGGACRAIYFSLADAGVKEIDIANRTVEKANHLLSGCQAKITSQALSLERATE 166
Query: 423 FFPEKGM--ILANASAIGMEPNSDQSPVPKEALKAYELVFDAVYTPRNTRLLREAAEVGA 480
E+G I+ + + IGM P+ +P+ +LK +V D +Y P T+LL++A GA
Sbjct: 167 ---EQGNYDIIIHTTTIGMHPHIQNTPLQIRSLKQGTIVSDIIYNPFETKLLQDAKAKGA 223
Query: 481 TVVSGVEMFIRQA 493
V +G++MF+ Q
Sbjct: 224 IVQNGIDMFVYQG 236
>gi|376007198|ref|ZP_09784399.1| Shikimate dehydrogenase [Arthrospira sp. PCC 8005]
gi|375324390|emb|CCE20152.1| Shikimate dehydrogenase [Arthrospira sp. PCC 8005]
Length = 285
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 92/288 (31%), Positives = 139/288 (48%), Gaps = 26/288 (9%)
Query: 237 TKIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLV--DDVKEFFRTYSGTDFAGFSV 294
TK+ G+V PV HS PI+HN A H + +YVP V D + +R + GF++
Sbjct: 6 TKLLGIVGYPVEHSMSPIMHNAAIAHLGVDYVYVPFPVAPDQLASAYRGFQAIGVQGFNL 65
Query: 295 GIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALRERQG 354
IPHK+ + D V LA ++GAVNT+ D G NTD ++ ++D
Sbjct: 66 TIPHKQAIIPLLDNVSKLATAVGAVNTVWYS--DQGWSGTNTDVAGFLAPLKD------- 116
Query: 355 INGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRG-ARVIIFNRNYERAKALADAVSGE 413
+N H KI V++G GGA RA+ G G A + I RN ++ + +
Sbjct: 117 LNFPNWHE-----KIAVILGNGGASRAVVAGCAELGMAEIHIVGRNPQKLEEFRQSWLHS 171
Query: 414 AL----HFEYLHEFFP--EKGMILANASAIGMEPNSDQSPVPKE---ALKAYELVFDAVY 464
L + E P ++ +L N + +GM P+ D+SPV E LK+ + +D +Y
Sbjct: 172 PLPIKVNVHNWQELNPLIKQADLLVNTTPVGMSPHIDRSPVDAENFEGLKSGAIAYDLIY 231
Query: 465 TPRNTRLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRK 512
TPR TR L+ A GA + G+EM I+Q ++ P MR+
Sbjct: 232 TPRPTRFLQLAKNQGAVAIDGLEMLIQQGAAALEIWLQQPIPISVMRQ 279
>gi|434396815|ref|YP_007130819.1| Shikimate dehydrogenase [Stanieria cyanosphaera PCC 7437]
gi|428267912|gb|AFZ33853.1| Shikimate dehydrogenase [Stanieria cyanosphaera PCC 7437]
Length = 288
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 86/290 (29%), Positives = 143/290 (49%), Gaps = 30/290 (10%)
Query: 237 TKIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLV--DDVKEFFRTYSGTDFAGFSV 294
TK+ G++ +PV HS P++HN A + +Y+P V +++ ++ D GFSV
Sbjct: 8 TKLLGIIGDPVEHSLSPVMHNAAIEQMGIDYVYIPFPVKPNNLAIAIAGFATIDLIGFSV 67
Query: 295 GIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALRERQG 354
IPHK+ + EV P A+ IGAVNT+ R + + G NTD ++ +++ R
Sbjct: 68 TIPHKQAIIPLLSEVTPEAEMIGAVNTVWRTKVGWQ--GTNTDVIGFVAPLQNLERNWH- 124
Query: 355 INGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGARVI-IFNRN-------YERAKAL 406
+P V++G GGA RA+ G G + I I RN Y+ +
Sbjct: 125 ------QVTP------VILGNGGAARAVIVGLIQLGCQEIHIVGRNKDKMAQFYQSWQDN 172
Query: 407 ADAVSGEALHF-EYLHEFFPEKGMILANASAIGMEPNSDQSPVPKEALKAYE---LVFDA 462
+ + +H+ E L+ P + L N + IGM P +QSP+ + K +V+D
Sbjct: 173 REIIKKLKIHYWEGLNALLPAAEL-LINTTPIGMYPQVEQSPIDAQLFKKLSSDAIVYDL 231
Query: 463 VYTPRNTRLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRK 512
+YTP T+ L+ A + GA ++ G+EM ++Q + ++ P D MR+
Sbjct: 232 IYTPNPTKFLQLAQKQGAIIIDGLEMLVQQGVAALEIWLQQPVPVDVMRQ 281
>gi|209524414|ref|ZP_03272963.1| shikimate 5-dehydrogenase [Arthrospira maxima CS-328]
gi|209495205|gb|EDZ95511.1| shikimate 5-dehydrogenase [Arthrospira maxima CS-328]
Length = 285
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 92/288 (31%), Positives = 139/288 (48%), Gaps = 26/288 (9%)
Query: 237 TKIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLV--DDVKEFFRTYSGTDFAGFSV 294
TK+ G+V PV HS PI+HN A H + +YVP V D + +R + GF++
Sbjct: 6 TKLLGIVGYPVEHSMSPIMHNAAIAHLGVDYVYVPFPVAPDQLASAYRGFQAIGVQGFNL 65
Query: 295 GIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALRERQG 354
IPHK+ + D V LA ++GAVNT+ D G NTD ++ ++D
Sbjct: 66 TIPHKQAIIPLLDNVSKLATAVGAVNTVWYS--DKGWSGTNTDVAGFLAPLKD------- 116
Query: 355 INGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRG-ARVIIFNRNYERAKALADAVSGE 413
+N H KI V++G GGA RA+ G G A + I RN ++ + +
Sbjct: 117 LNFPNWHE-----KIAVILGNGGASRAVVAGCAELGMAEIHIVGRNPQKLEEFRQSWLHS 171
Query: 414 AL----HFEYLHEFFP--EKGMILANASAIGMEPNSDQSPVPKE---ALKAYELVFDAVY 464
L + E P ++ +L N + +GM P+ D+SPV E LK+ + +D +Y
Sbjct: 172 PLPIKVNVHNWQELNPLIKQADLLVNTTPVGMSPHIDRSPVDAENFEGLKSGAIAYDLIY 231
Query: 465 TPRNTRLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRK 512
TPR TR L+ A GA + G+EM I+Q ++ P MR+
Sbjct: 232 TPRPTRFLQLAKNQGAVAIDGLEMLIQQGAAALEIWLQQPIPISVMRQ 279
>gi|434403542|ref|YP_007146427.1| shikimate dehydrogenase [Cylindrospermum stagnale PCC 7417]
gi|428257797|gb|AFZ23747.1| shikimate dehydrogenase [Cylindrospermum stagnale PCC 7417]
Length = 294
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 86/296 (29%), Positives = 149/296 (50%), Gaps = 33/296 (11%)
Query: 233 INPDTKIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLV--DDVKEFFRTYSGTDFA 290
I TK+ G++ +PV HS P++HN A + +Y+P+ + +++ ++
Sbjct: 7 ITGKTKLLGVIGHPVEHSLSPVMHNVALGEMGLDYVYLPLPIAPQNLEIAIAGFAAIGVV 66
Query: 291 GFSVGIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALR 350
GFSV IPHK+ + E+ P+A++IGAVNT+ R+ DGK VG NTD E I+ ++
Sbjct: 67 GFSVTIPHKQAILPLLSEITPVAQAIGAVNTVTRQ--DGKWVGTNTDVEGFIAPLQTTYH 124
Query: 351 E--RQGINGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRG-ARVIIFNRNYERAKALA 407
+ RQ K+ V++G GGA R++ G G A + + RN ++ +
Sbjct: 125 QDWRQ--------------KVAVILGNGGAARSVVAGCIQLGFASIHVVGRNVQKLEEFR 170
Query: 408 DAVSGEAL-------HFEYLHEFFPEKGMILANASAIGMEPNSDQSPVPKEA---LKAYE 457
+ L +E L + P+ + L N + +GM P + SP+ E L A
Sbjct: 171 HSWGNSPLKEKFQVHQWEELPQLIPQADL-LVNTTPVGMYPQVEASPLSVEEMADLPADA 229
Query: 458 LVFDAVYTPRNTRLLREAAEVGATVVSGVEMFIRQALGQFRLFTG-GLAPEDFMRK 512
+ +D +Y P+ T L++A + GA + G+EM ++Q +++ + P D MR+
Sbjct: 230 IAYDLIYIPKPTLFLQQAEKQGAIAIDGLEMLVQQGAAALKIWLQRPIVPVDAMRQ 285
>gi|452852866|ref|YP_007494550.1| Shikimate dehydrogenase [Desulfovibrio piezophilus]
gi|451896520|emb|CCH49399.1| Shikimate dehydrogenase [Desulfovibrio piezophilus]
Length = 272
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 97/280 (34%), Positives = 137/280 (48%), Gaps = 22/280 (7%)
Query: 239 IFGLVSNPVGHSKGPILHNPAFRHTRFNGIYV--PMLVDDVKEFFRTYSGTDFAGFSVGI 296
++G++ P+GH+ P LHN FR + + Y P+ D + +F R F G SV I
Sbjct: 4 LYGIIGWPLGHTMSPTLHNWGFRQSGADAAYAAYPLEPDQIPDFMRRVRDEPFLGLSVTI 63
Query: 297 PHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALRERQGIN 356
PHK + D + A +GAVNT+ +GKL G NTD I+ +
Sbjct: 64 PHKRTVMEFLDHMTDRAVRVGAVNTLYWD--EGKLCGENTDVLGLIAPLR---------- 111
Query: 357 GVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGARVIIFNRNYERAKALADAVSGEALH 416
H P+ +L G A A+ + A + I NR E+A+ALA+ S A+
Sbjct: 112 ----HMQPLPASAMILGAGGAARAAVVGFKELGIADIAIANRTGEKAEALAEEFSIRAVA 167
Query: 417 FEYLHEFFPEKGMILANASAIGMEPNSDQ-SPVPKEALKAYELVFDAVYTPRNTRLLREA 475
+E E E+ ++ N + +GM + SP + A V+D VY P TRLLREA
Sbjct: 168 WESRME---EEPALICNTTPLGMSGTMETFSPWDAKRFPAGCTVYDIVYNPLETRLLREA 224
Query: 476 AEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRKLVL 515
A VG VSG+EMF+ Q L QFRL+TG E R L+L
Sbjct: 225 AAVGCGTVSGLEMFLHQGLAQFRLWTGKDMDEAGARALLL 264
>gi|145577931|gb|ABP82684.1| shikimate 5-dehydrogenase [Bacillus thuringiensis serovar
roskildiensis]
Length = 238
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 90/250 (36%), Positives = 127/250 (50%), Gaps = 22/250 (8%)
Query: 250 SKGPILHNPAFRHTRFNGIYVPMLVDD--VKEFFRTYSGTDFAGFSVGIPHKEPAVACCD 307
S P++HN AF H + Y LV + + E R +GF+V PHK + D
Sbjct: 1 SLSPVMHNDAFEHLNMDARYHAFLVKEEVLGEAVRGLKALGISGFNVTTPHKVAIMNYLD 60
Query: 308 EVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALRERQGINGVASHTSPIAG 367
E+ PLAK IGAVNT++ + DGKL+GYNTD + A++ E P+
Sbjct: 61 EIDPLAKQIGAVNTVVHK--DGKLIGYNTDGIGFVRALQSISSE------------PLQE 106
Query: 368 KIFVLVGAGGAGRALAFGAKSRGARVI-IFNRNYERAKALADA----VSGEALHFEYLHE 422
K +L+GAGGA RA+ F G R I + NR ++AK L A V AL E E
Sbjct: 107 KRILLLGAGGASRAIYFSLADVGVREIDVANRTVDKAKELIAACTATVHSVALSLEKATE 166
Query: 423 FFPEKGMILANASAIGMEPNSDQSPVPKEALKAYELVFDAVYTPRNTRLLREAAEVGATV 482
E I+ + IGM P +P+ +LK +V D +Y P T++L EA E GA +
Sbjct: 167 E-QENYDIIIQTTTIGMHPRVQHTPLQISSLKKGTIVSDIIYNPFETKILCEAKEQGAMI 225
Query: 483 VSGVEMFIRQ 492
+G++MF+ Q
Sbjct: 226 QNGIDMFVYQ 235
>gi|145577941|gb|ABP82689.1| shikimate 5-dehydrogenase [Bacillus thuringiensis serovar
azorensis]
gi|145577953|gb|ABP82695.1| shikimate 5-dehydrogenase [Bacillus thuringiensis serovar
zhaodongensis]
Length = 238
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 88/252 (34%), Positives = 134/252 (53%), Gaps = 26/252 (10%)
Query: 250 SKGPILHNPAFRHTRFNGIYVPMLVDD--VKEFFRTYSGTDFAGFSVGIPHKEPAVACCD 307
S P++HN AF H + Y LV++ + E R +GF+V PHK + D
Sbjct: 1 SLSPVMHNDAFEHLNMDAHYHAFLVEEELLGEAVRGLKALGISGFNVTTPHKVAIMEYLD 60
Query: 308 EVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALRERQGINGVASHTSPIAG 367
E+ PLA+ IGAVNT++ + DG+L+GYNTD + A++ E P+ G
Sbjct: 61 EIDPLARKIGAVNTVVHK--DGRLIGYNTDGIGFVRALQSISNE------------PLQG 106
Query: 368 KIFVLVGAGGAGRALAFGAKSRGARVI-IFNRNYERAKALADA----VSGEALHFEYLHE 422
K +L+G+GGA RA+ F G + I + NR ++AK L A V+ AL E E
Sbjct: 107 KRILLLGSGGASRAIYFSLADVGVKEIDVANRTVDKAKELIAARTADVNSVALSLEKATE 166
Query: 423 FFPEKGM--ILANASAIGMEPNSDQSPVPKEALKAYELVFDAVYTPRNTRLLREAAEVGA 480
E+G I+ + IGM P+ + +P+ +LK +V D +Y P T++L EA E GA
Sbjct: 167 ---EQGNYDIIIQTTTIGMHPHVEHTPLQICSLKKGTIVSDIIYNPFETKILCEAKEQGA 223
Query: 481 TVVSGVEMFIRQ 492
+ +G++MF+ Q
Sbjct: 224 IIQNGIDMFVYQ 235
>gi|423063524|ref|ZP_17052314.1| putative shikimate 5-dehydrogenase [Arthrospira platensis C1]
gi|406714956|gb|EKD10114.1| putative shikimate 5-dehydrogenase [Arthrospira platensis C1]
Length = 285
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 92/288 (31%), Positives = 138/288 (47%), Gaps = 26/288 (9%)
Query: 237 TKIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLV--DDVKEFFRTYSGTDFAGFSV 294
TK+ G+V PV HS PI+HN A H + +YVP V D + +R + GF++
Sbjct: 6 TKLLGIVGYPVEHSMSPIMHNAAIAHLGVDYVYVPFPVTPDQLASAYRGFQAIGVQGFNL 65
Query: 295 GIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALRERQG 354
IPHK+ + D V LA ++GAVNT+ D G NTD ++ ++D
Sbjct: 66 TIPHKQAIIPLLDNVSKLATAVGAVNTVWYS--DKGWSGTNTDVAGFLAPLKD------- 116
Query: 355 INGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRG-ARVIIFNRNYERAKALADAVSGE 413
+N H KI V++G GGA RA+ G G A + I RN ++ + +
Sbjct: 117 LNFPNWHE-----KIAVILGNGGASRAVVAGCAELGMAEIHIVGRNPQKLEEFRQSWLHS 171
Query: 414 AL----HFEYLHEFFP--EKGMILANASAIGMEPNSDQSPVPKE---ALKAYELVFDAVY 464
L + E P + +L N + +GM P+ D+SPV E LK+ + +D +Y
Sbjct: 172 PLPIKVNVHNWQELNPLIRQADLLVNTTPVGMSPHIDRSPVDAENFEGLKSGAIAYDLIY 231
Query: 465 TPRNTRLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRK 512
TPR TR L+ A GA + G+EM I+Q ++ P MR+
Sbjct: 232 TPRPTRFLQLAKNQGAVAIDGLEMLIQQGAAALEIWLQQPIPISVMRQ 279
>gi|375086215|ref|ZP_09732637.1| shikimate 5-dehydrogenase [Megamonas funiformis YIT 11815]
gi|374566077|gb|EHR37330.1| shikimate 5-dehydrogenase [Megamonas funiformis YIT 11815]
Length = 286
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 95/286 (33%), Positives = 142/286 (49%), Gaps = 26/286 (9%)
Query: 237 TKIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLV--DDVKEFFRTYSGTDFAGFSV 294
TK G++ P+ HS P++ N A + + Y+ M + +D+++ +F GF+V
Sbjct: 7 TKNLGVIGYPIKHSLSPVIQNTAIQEAGIDYAYIAMPIAPEDLEKAVIGLKALNFTGFNV 66
Query: 295 GIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALRERQG 354
IPHK + DE+ +AK IGAVNT+ + DGKL GYNTD AI I L+E
Sbjct: 67 TIPHKVNIMQYLDEIDEMAKLIGAVNTVHIK--DGKLYGYNTD---AIGFINPLLKEN-- 119
Query: 355 INGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGARVIIFN-RNYERAKALADAVSGE 413
I K V++GAGGA RA+ G +G + II RN +A+ LA+ +
Sbjct: 120 --------VEIKDKTAVILGAGGACRAVVCGLIKQGIKNIILAVRNLAKAQLLANDFNDL 171
Query: 414 A------LHFEYLHEFFPEKGMILANASAIGMEPNSD-QSPVPKEALKAYELVFDAVYTP 466
H E ++ + + L N + +GME N D + PV E++K V+D VY P
Sbjct: 172 VDIKVCDWHSEEFKQYLAQADL-LVNTTPLGMEGNIDSKPPVDWESVKKSAFVYDIVYIP 230
Query: 467 RNTRLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRK 512
T+ L+EA E G +++G M Q + L+T D M K
Sbjct: 231 AETKFLQEAKEYGHKILNGERMLAEQGVAALHLWTDKDINVDIMVK 276
>gi|302671210|ref|YP_003831170.1| shikimate 5-dehydrogenase/shikimate kinase [Butyrivibrio
proteoclasticus B316]
gi|302395683|gb|ADL34588.1| shikimate 5-dehydrogenase/shikimate kinase [Butyrivibrio
proteoclasticus B316]
Length = 510
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 94/301 (31%), Positives = 149/301 (49%), Gaps = 52/301 (17%)
Query: 236 DTKIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLV--DDVKEFFRTYSGTDFAGFS 293
+T + GL+ NPV H+ P++HN T N +YVP V DV + + G +
Sbjct: 8 NTNVCGLIGNPVRHTLSPLIHNSLAEITGINMVYVPFEVAEGDVSDAVKGALALGVRGLN 67
Query: 294 VGIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALRERQ 353
V IP+K + C +++ PLAK+IGAVNT++R P +G GYNTD +++D +
Sbjct: 68 VTIPYKSDVIPCLEDIDPLAKAIGAVNTLVRTP-NGGFKGYNTDMTGLYHSMQD-----E 121
Query: 354 GINGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGA-RVIIFNRNYERA--------K 404
G+ + G+ V++GAGG R AF S+GA +V I NR YERA +
Sbjct: 122 GVE--------LEGRTVVILGAGGVARPAAFLCASKGAKKVYILNRTYERAMDVAGEVNR 173
Query: 405 AL----------ADAVSGEA-----------LHFEYLHEFFPEK-GMILANASAIGMEPN 442
AL AD ++ E + E + + EK I +++G+ P+
Sbjct: 174 ALFDLSREDLVTADGINAEGDPLDIPEIVVPMKIENYRDLYEEKEKFITLQCTSVGLFPD 233
Query: 443 SDQSPVPKEALKAYELV---FDAVYTPRNTRLLREAAEVGATVVSGVEMFIRQALGQFRL 499
+ + + E + YE + D VY P T+ ++ AE GA VSG++M + QA+ + L
Sbjct: 234 VNSAII--EDSEFYEHISVGIDMVYRPLETKFMKLTAEAGAKAVSGLKMLLYQAIDAYEL 291
Query: 500 F 500
+
Sbjct: 292 W 292
>gi|145577907|gb|ABP82672.1| shikimate 5-dehydrogenase [Bacillus thuringiensis serovar
entomocidus]
Length = 238
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 88/252 (34%), Positives = 134/252 (53%), Gaps = 26/252 (10%)
Query: 250 SKGPILHNPAFRHTRFNGIYVPMLVDD--VKEFFRTYSGTDFAGFSVGIPHKEPAVACCD 307
S P++HN AF H + Y LV++ + E R +GF+V PHK + D
Sbjct: 1 SLSPVMHNDAFEHLNMDARYHAFLVEEELLGEAVRGLKALGISGFNVTTPHKVAIMEYLD 60
Query: 308 EVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALRERQGINGVASHTSPIAG 367
E+ PLA+ IGAVNT++ + DG+L+GYNTD + A++ E P+ G
Sbjct: 61 EIDPLARKIGAVNTVVHK--DGRLIGYNTDGIGFVRALQSISNE------------PLQG 106
Query: 368 KIFVLVGAGGAGRALAFGAKSRGARVI-IFNRNYERAKALADA----VSGEALHFEYLHE 422
K +L+G+GGA RA+ F G + I + NR ++AK L A V+ AL E E
Sbjct: 107 KRILLLGSGGASRAIYFSLADVGVKEIDVANRTVDKAKELIAARTADVNSVALSLEKATE 166
Query: 423 FFPEKGM--ILANASAIGMEPNSDQSPVPKEALKAYELVFDAVYTPRNTRLLREAAEVGA 480
E+G I+ + IGM P+ + +P+ +LK +V D +Y P T++L EA E GA
Sbjct: 167 ---EQGNYDIIIQTTTIGMHPHVEHTPLQICSLKKGTIVSDIIYNPFETKILCEAKEQGA 223
Query: 481 TVVSGVEMFIRQ 492
+ +G++MF+ Q
Sbjct: 224 IIQNGIDMFVYQ 235
>gi|145577893|gb|ABP82665.1| shikimate 5-dehydrogenase [Bacillus thuringiensis serovar
finitimus]
gi|145577895|gb|ABP82666.1| shikimate 5-dehydrogenase [Bacillus thuringiensis serovar
finitimus]
Length = 238
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 89/250 (35%), Positives = 128/250 (51%), Gaps = 22/250 (8%)
Query: 250 SKGPILHNPAFRHTRFNGIYVPMLVDD--VKEFFRTYSGTDFAGFSVGIPHKEPAVACCD 307
S P++HN AF H + Y LV + + E R +GF+V PHK + D
Sbjct: 1 SLSPVMHNDAFEHLNMDAHYHAFLVKEEVLGEAVRGLKALGISGFNVTTPHKVAIMDYLD 60
Query: 308 EVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALRERQGINGVASHTSPIAG 367
E+ PLAK IGAVNT++ + DGKL+GYNTD + A++ E P+
Sbjct: 61 EIDPLAKQIGAVNTVVHK--DGKLIGYNTDGIGFVRALQSISSE------------PLQE 106
Query: 368 KIFVLVGAGGAGRALAFGAKSRGARVI-IFNRNYERAKALADA----VSGEALHFEYLHE 422
K +L+GAGGA RA+ F G + I + NR ++AK L A V AL E E
Sbjct: 107 KRILLLGAGGASRAIYFSLADVGVKEIDVANRTVDKAKELITACMATVHSVALSLEKATE 166
Query: 423 FFPEKGMILANASAIGMEPNSDQSPVPKEALKAYELVFDAVYTPRNTRLLREAAEVGATV 482
E I+ + IGM P + +P+ +LK +V D +Y P T++L EA E GA +
Sbjct: 167 E-QENYDIIIQTTTIGMHPRVEHTPLQISSLKKGTIVSDIIYNPFETKILCEAKEQGAMI 225
Query: 483 VSGVEMFIRQ 492
+G++MF+ Q
Sbjct: 226 QNGIDMFVYQ 235
>gi|430750627|ref|YP_007213535.1| shikimate 5-dehydrogenase [Thermobacillus composti KWC4]
gi|430734592|gb|AGA58537.1| shikimate 5-dehydrogenase [Thermobacillus composti KWC4]
Length = 294
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 97/295 (32%), Positives = 151/295 (51%), Gaps = 24/295 (8%)
Query: 233 INPDTKIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLV--DDVKEFFRTYSGTDFA 290
I+ T ++G++ +P+ HSK P++ + AFR T N +Y+ V + + F
Sbjct: 13 IDSHTVLYGVIGDPIRHSKSPVMLSRAFRETGVNAVYLAFHVTAERLAAFAEGARAMGMG 72
Query: 291 GFSVGIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALR 350
GF+V IPHK +A DE+ P A++ GAVNT++RR + KL+GYNTD + +L+
Sbjct: 73 GFNVTIPHKTAIMAHLDEIDPTAEAAGAVNTVVRR--EDKLIGYNTDGIGYVR----SLK 126
Query: 351 ERQGINGVASHTSPIAGKIFVLVGAGGAGRALAFG-AKSRGARVIIFNRN----YERAKA 405
E G + ++G+ V++GAGGA R + A + A + + NR A+A
Sbjct: 127 EEAG--------AELSGRRIVVLGAGGAARGILHALALEKPAHIAVVNRTAARAEALAQA 178
Query: 406 LADAVSGEALHFEYLHEFFPEKGMILANASAIGMEPNSDQSPVPKEA--LKAYELVFDAV 463
L V AL + L E + +++ N ++ GM PN+D+ P+ +A +K + D V
Sbjct: 179 LPADVPKAALGPDDLREACADADIVI-NTTSAGMSPNTDELPLGIDASWMKPGAVASDIV 237
Query: 464 YTPRNTRLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRKLVLEQF 518
Y P TR L EA G G+ MFI Q F +TG AP MR+ V+
Sbjct: 238 YNPMRTRFLEEAERAGCRTHGGLGMFIYQGAYAFEYWTGQAAPVAAMRETVIRAL 292
>gi|409994164|ref|ZP_11277283.1| shikimate 5-dehydrogenase [Arthrospira platensis str. Paraca]
gi|409934994|gb|EKN76539.1| shikimate 5-dehydrogenase [Arthrospira platensis str. Paraca]
Length = 285
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 91/288 (31%), Positives = 138/288 (47%), Gaps = 26/288 (9%)
Query: 237 TKIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLV--DDVKEFFRTYSGTDFAGFSV 294
TK+ G+V PV HS PI+HN A H + +YVP V D + +R + GF++
Sbjct: 6 TKLLGIVGYPVEHSMSPIMHNAAIAHLGVDYVYVPFPVAPDQLASAYRGFQAIGIQGFNL 65
Query: 295 GIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALRERQG 354
IPHK+ + D V LA ++GAVNT+ D G NTD ++ + +
Sbjct: 66 TIPHKQAIIPLLDNVSKLATAVGAVNTVWYS--DKGWSGTNTDVAGFLAPL-------KA 116
Query: 355 INGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRG-ARVIIFNRNYERAKALADAVSGE 413
+N H KI V++G GGA RA+ G G A + I RN ++ + +
Sbjct: 117 LNRPNWHE-----KIAVILGNGGASRAVVAGCAELGMAEIHIVGRNPQKLEEFKQSWLNS 171
Query: 414 AL----HFEYLHEFFP--EKGMILANASAIGMEPNSDQSPVPKE---ALKAYELVFDAVY 464
L + E P ++ +L N + +GM P+ D+SPV E LK+ + +D +Y
Sbjct: 172 PLPIKVNVHNWQELNPLIKQADLLVNTTPVGMSPHIDRSPVDAENFEGLKSGAIAYDLIY 231
Query: 465 TPRNTRLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRK 512
TPR TR L+ A GA + G+EM I+Q ++ P MR+
Sbjct: 232 TPRPTRFLQLAKNQGAVAIDGLEMLIQQGAAALEIWLQQPIPISVMRQ 279
>gi|291571861|dbj|BAI94133.1| shikimate 5-dehydrogenase [Arthrospira platensis NIES-39]
Length = 285
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 91/288 (31%), Positives = 138/288 (47%), Gaps = 26/288 (9%)
Query: 237 TKIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLV--DDVKEFFRTYSGTDFAGFSV 294
TK+ G+V PV HS PI+HN A H + +YVP V D + +R + GF++
Sbjct: 6 TKLLGIVGYPVEHSMSPIMHNAAIAHLGVDYVYVPFPVAPDQLASAYRGFQAIGIQGFNL 65
Query: 295 GIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALRERQG 354
IPHK+ + D V LA ++GAVNT+ D G NTD ++ + +
Sbjct: 66 TIPHKQAIIPLLDNVSKLATAVGAVNTVWYS--DKGWSGTNTDVAGFLAPL-------KA 116
Query: 355 INGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRG-ARVIIFNRNYERAKALADAVSGE 413
+N H KI V++G GGA RA+ G G A + I RN ++ + +
Sbjct: 117 LNCPNWHE-----KIAVILGNGGASRAVVAGCAELGMAEIHIVGRNPQKLEEFKQSWLNS 171
Query: 414 AL----HFEYLHEFFP--EKGMILANASAIGMEPNSDQSPVPKE---ALKAYELVFDAVY 464
L + E P ++ +L N + +GM P+ D+SPV E LK+ + +D +Y
Sbjct: 172 PLPIKVNVHNWQELNPLIKQADLLVNTTPVGMSPHIDRSPVDAENFEGLKSGAIAYDLIY 231
Query: 465 TPRNTRLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRK 512
TPR TR L+ A GA + G+EM I+Q ++ P MR+
Sbjct: 232 TPRPTRFLQLAKNQGAVAIDGLEMLIQQGAAALEIWLQQPIPISVMRQ 279
>gi|284161990|ref|YP_003400613.1| shikimate 5-dehydrogenase [Archaeoglobus profundus DSM 5631]
gi|284011987|gb|ADB57940.1| shikimate 5-dehydrogenase [Archaeoglobus profundus DSM 5631]
Length = 271
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 99/282 (35%), Positives = 145/282 (51%), Gaps = 25/282 (8%)
Query: 240 FGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLV--DDVKEFFRTYSGTDFAGFSVGIP 297
FG++ +P+GHS PI+HN FR + IY+P V +++K+ F G +V IP
Sbjct: 4 FGVIGHPIGHSASPIMHNTVFRTLNIDAIYLPFDVKPENLKDAVYGARALGFKGLNVTIP 63
Query: 298 HKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALRERQGING 357
HKE V LA+ IGAVNT + P KL GYNTD A+ +E
Sbjct: 64 HKEEITKYVKPVG-LAERIGAVNT-VDVP---KLEGYNTDAIGALRTLE----------- 107
Query: 358 VASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGARVIIFNRNYERAKALADAVS--GEAL 415
++ GK+ ++VGAGG RA+AF + + +II NR R LA+ V GE +
Sbjct: 108 --AYNVDYEGKVVLIVGAGGVARAIAFALAGK-STLIITNRTASRGLKLAEDVRKYGECI 164
Query: 416 HFEYLH-EFFPEKGMILANASAIGMEPNSDQSPVPKEALKAYELVFDAVYTPRNTRLLRE 474
+ Y E K IL N + +GM+ ++ PVP E+L +VFD VY P T L++
Sbjct: 165 FYPYERVEELKGKFDILINCTPLGMKGFEEKLPVP-ESLIENVVVFDTVYNPIETPLIKL 223
Query: 475 AAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRKLVLE 516
A + G V+ G++M + Q F+++ G P MR V+E
Sbjct: 224 AKKRGCKVIYGLDMLVYQGAEAFKIWFGFDPPILVMRDAVVE 265
>gi|329925883|ref|ZP_08280593.1| shikimate dehydrogenase [Paenibacillus sp. HGF5]
gi|328939534|gb|EGG35883.1| shikimate dehydrogenase [Paenibacillus sp. HGF5]
Length = 286
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 94/296 (31%), Positives = 144/296 (48%), Gaps = 24/296 (8%)
Query: 233 INP----DTKIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLV--DDVKEFFRTYSG 286
+NP D + G++ +P+GHSK P +H+ A +G YVP+ + + + +
Sbjct: 1 MNPMNERDYLLLGVMGDPIGHSKSPAMHDAAINALGLSGAYVPLHIRPQGLGDAIQAVKA 60
Query: 287 TDFAGFSVGIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIE 346
F G +V IPHK + D V A+ IGAVNTI+ +GKL GYNTD + +++
Sbjct: 61 LGFRGVNVTIPHKVEVMKYLDVVDEGAQRIGAVNTIVND--NGKLTGYNTDGIGYVRSLK 118
Query: 347 DALRERQGINGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGA-RVIIFNRNYERAKA 405
D + GK V++GAGGA R + + G ++ I NR +A A
Sbjct: 119 D------------EACPDLKGKRIVVIGAGGAARGIIYALIGEGPEKISIVNRTSAKALA 166
Query: 406 LADAVSGEALHFEYLHEFFPE---KGMILANASAIGMEPNSDQSPVPKEALKAYELVFDA 462
LA+ S A Y E E ++ N +++GM P + P+P E+++ +V D
Sbjct: 167 LAEEWSSLADLRGYGEEDAGEALSDADVIINTTSVGMFPRISELPIPPESIREGIVVSDL 226
Query: 463 VYTPRNTRLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRKLVLEQF 518
+Y P T LLR+ T+ G+ MFI Q F +TG AP M++ VL F
Sbjct: 227 IYNPLKTELLRQGELRRCTIHGGLGMFINQGAYAFEYWTGLTAPVQAMKEAVLTSF 282
>gi|397690320|ref|YP_006527574.1| shikimate 5-dehydrogenase [Melioribacter roseus P3M]
gi|395811812|gb|AFN74561.1| shikimate 5-dehydrogenase [Melioribacter roseus P3M]
Length = 293
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 92/297 (30%), Positives = 149/297 (50%), Gaps = 34/297 (11%)
Query: 234 NPDTKIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLVDD--VKEFFRTYSGTDFAG 291
N +TKI G++ +P+ HS P++HN AF T+ N IY+P V +K+ + G
Sbjct: 8 NHNTKIIGIIGHPIKHSFSPLMHNLAFELTKLNYIYLPFDVPPTLLKDSLKGMIALGIKG 67
Query: 292 FSVGIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALRE 351
F+V IP KE + ++ A IGAVNTI+ +G L GYNTD I ++ E
Sbjct: 68 FNVTIPLKEKVIPLLKDISEEANIIGAVNTIVND--EGVLRGYNTDVLGVIESLNPYKEE 125
Query: 352 RQGINGVASHTSPIAGKIFVLVGAGGAGRALAFGA--KSRGARVIIFNRNYERAKALADA 409
Q ++GAGGA R++ + + R+ I NR + A++L +
Sbjct: 126 LQN-------------SAVTVIGAGGAARSVIYALIRHFKVERINIVNRTEQIAESLKEY 172
Query: 410 VSGEALHF----------EYLHEFFPEKGMILANASAIGMEPNSDQ--SPVPKEALKAYE 457
S + L + ++ F K ++ N +++GM P+ D + +P E+ +
Sbjct: 173 FSTKMLFNNIKAYPLMPPDLVNTFNSSK--LIVNTTSMGMFPDIDDAATTIP-ESFNKEQ 229
Query: 458 LVFDAVYTPRNTRLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRKLV 514
+VFD VYTP T+LL+ A GA +++G+ MF+ Q F L+TG P+D + K +
Sbjct: 230 IVFDVVYTPIKTKLLKLAESRGARIITGLRMFVEQGAKSFELWTGEEMPKDEIYKAI 286
>gi|145577951|gb|ABP82694.1| shikimate 5-dehydrogenase [Bacillus thuringiensis serovar
tolworthi]
Length = 238
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 88/252 (34%), Positives = 134/252 (53%), Gaps = 26/252 (10%)
Query: 250 SKGPILHNPAFRHTRFNGIYVPMLVDD--VKEFFRTYSGTDFAGFSVGIPHKEPAVACCD 307
S P++HN AF H + Y LV++ + E R +GF+V PHK + D
Sbjct: 1 SLSPVMHNDAFEHLNMDAHYHAFLVEEELLGEAVRGLKALGISGFNVTTPHKVAIMEYLD 60
Query: 308 EVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALRERQGINGVASHTSPIAG 367
E+ PLA+ IGAVNT++ + DG+L+GYNTD + A++ E P+ G
Sbjct: 61 EIDPLARKIGAVNTVVHK--DGRLIGYNTDGIGFVRALQSISNE------------PLQG 106
Query: 368 KIFVLVGAGGAGRALAFGAKSRGARVI-IFNRNYERAKALADA----VSGEALHFEYLHE 422
K +L+G+GGA RA+ F G + I + NR ++AK L A V+ AL E E
Sbjct: 107 KRILLLGSGGASRAIYFSLADVGVKEIDVANRTVDKAKELIAARTADVNSVALSLEKATE 166
Query: 423 FFPEKGM--ILANASAIGMEPNSDQSPVPKEALKAYELVFDAVYTPRNTRLLREAAEVGA 480
E+G I+ + IGM P+ + +P+ +LK +V D +Y P T++L EA E GA
Sbjct: 167 ---EQGNYDIIIQTTTIGMHPHVEHTPLQICSLKKGMIVSDIIYNPFETKILCEAKEQGA 223
Query: 481 TVVSGVEMFIRQ 492
+ +G++MF+ Q
Sbjct: 224 IIQNGIDMFVYQ 235
>gi|268315725|ref|YP_003289444.1| shikimate 5-dehydrogenase [Rhodothermus marinus DSM 4252]
gi|262333259|gb|ACY47056.1| shikimate 5-dehydrogenase [Rhodothermus marinus DSM 4252]
Length = 297
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 101/291 (34%), Positives = 144/291 (49%), Gaps = 29/291 (9%)
Query: 233 INPDTKIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLV--DDVKEFFRTYSGTDFA 290
I T+ L+ +PV HS P++HN F+ + +Y+ V D + E FA
Sbjct: 9 IRATTRPIALLGDPVAHSFSPLIHNTGFQTQGLDFVYLACRVPKDALPEAIAGLRALGFA 68
Query: 291 GFSVGIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDG----KLVGYNTDCESAISAIE 346
G +V IPHKE D P A++IGAVNTI+ R DG +L+G NTD E + ++
Sbjct: 69 GANVTIPHKEAVRPLLDRCTPRAEAIGAVNTIVCR-ADGSGAVELIGDNTDVEGFLEPLQ 127
Query: 347 DALRERQGINGVASHTSPIAGKIFVLVGAGGAGRALAFG--AKSRGARVIIFNRNYERAK 404
+L +R +AG V++GAGGA RA+ + + R R+ I R R +
Sbjct: 128 -SLADR------------LAGAEMVVLGAGGAARAVVYALLTEFRPTRLTIVARTPARGE 174
Query: 405 ALADAVSG----EALHFEYLHEFFP--EKGMILANASAIGMEPNSDQSPVPK-EALKAYE 457
ALA + AL E P ++ NA+ +GM P+ SP P E +
Sbjct: 175 ALAADFATYDTRRALQVMAPDEAAPAVRSACLIVNATPVGMHPHVAASPWPHAEDFGPEQ 234
Query: 458 LVFDAVYTPRNTRLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPED 508
+V+D VY P TRLLREAA GAT + G+ M I QA +R +TG P +
Sbjct: 235 IVYDLVYNPVRTRLLREAAARGATTIDGLTMLIGQAAAAYRQWTGRELPRE 285
>gi|398307025|ref|ZP_10510611.1| shikimate 5-dehydrogenase [Bacillus vallismortis DV1-F-3]
Length = 280
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 95/287 (33%), Positives = 150/287 (52%), Gaps = 26/287 (9%)
Query: 238 KIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLV--DDVKEFFRTYSGTDFAGFSVG 295
K++G++ NP+GHS P +HN + + +G Y V +D+++ + G +V
Sbjct: 3 KLYGVIGNPIGHSMSPDIHNASLKDLGLDGYYHAFKVEENDLEDAVKGIRALGVQGINVT 62
Query: 296 IPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALRERQGI 355
+PHK + D + AK IGAVNT+ RR D KLVGYNTD E + ++ L +
Sbjct: 63 VPHKVSIMNYLDHIDESAKVIGAVNTV-RREGD-KLVGYNTDGEGFVKSLMKVLDK---- 116
Query: 356 NGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRG--ARVIIFNRNYERAKALADAVSGE 413
PI+ F+++GAGGA RA+ F +R + I NR E+AK L + S
Sbjct: 117 --------PISELSFLMIGAGGAARAI-FTTIARDIPKKFDICNRTLEKAKQLTE--SAP 165
Query: 414 ALHF-EYLHEFFPEKGM----ILANASAIGMEPNSDQSPVPKEALKAYELVFDAVYTPRN 468
+ H E L EK + ++ + +++GM PN + +P+ + + +V D VY P
Sbjct: 166 SFHNKEVLSMTEAEKRLEQYDVIIHTTSVGMYPNVEDAPLSLQHAASCAVVCDIVYNPIQ 225
Query: 469 TRLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRKLVL 515
T LL+EA + G + GV MF+ QA F+L+TG + MR +V+
Sbjct: 226 TALLKEANQNGLKTLDGVGMFVEQAALSFQLWTGKEPDIEKMRSIVI 272
>gi|145577899|gb|ABP82668.1| shikimate 5-dehydrogenase [Bacillus cereus]
Length = 238
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 88/252 (34%), Positives = 134/252 (53%), Gaps = 26/252 (10%)
Query: 250 SKGPILHNPAFRHTRFNGIYVPMLVDD--VKEFFRTYSGTDFAGFSVGIPHKEPAVACCD 307
S P++HN AF H + Y LV++ + E R +GF+V PHK + D
Sbjct: 1 SLSPVMHNDAFEHLNMDAHYHAFLVEEELLGEAVRGLKALGISGFNVTTPHKVAIMEYLD 60
Query: 308 EVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALRERQGINGVASHTSPIAG 367
E+ PLA+ IGAVNT++ + DG+L+GYNTD + A++ E P+ G
Sbjct: 61 EIDPLARKIGAVNTVVHK--DGRLIGYNTDGIGFVRALQSISNE------------PLQG 106
Query: 368 KIFVLVGAGGAGRALAFGAKSRGARVI-IFNRNYERAKALADA----VSGEALHFEYLHE 422
K +L+G+GGA RA+ F G + I + NR ++AK L A V+ AL E E
Sbjct: 107 KRILLLGSGGASRAIYFSLADVGVKEIDVANRTVDKAKELIAARTADVNSVALSLEKATE 166
Query: 423 FFPEKGM--ILANASAIGMEPNSDQSPVPKEALKAYELVFDAVYTPRNTRLLREAAEVGA 480
E+G I+ + IGM P+ + +P+ +LK +V D +Y P T++L EA E GA
Sbjct: 167 ---EQGNYDIIIQTTTIGMRPHVEHTPLQICSLKKGMIVSDIIYNPFETKILCEAKEQGA 223
Query: 481 TVVSGVEMFIRQ 492
+ +G++MF+ Q
Sbjct: 224 IIQNGIDMFVYQ 235
>gi|150388897|ref|YP_001318946.1| shikimate 5-dehydrogenase [Alkaliphilus metalliredigens QYMF]
gi|166988267|sp|A6TM69.1|AROE_ALKMQ RecName: Full=Shikimate dehydrogenase
gi|149948759|gb|ABR47287.1| shikimate 5-dehydrogenase [Alkaliphilus metalliredigens QYMF]
Length = 286
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 91/294 (30%), Positives = 153/294 (52%), Gaps = 29/294 (9%)
Query: 237 TKIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLV--DDVKEFFRTYSGTDFAGFSV 294
T++ GL+ PV HS P++HN AF+H + +Y+ V D++KE D AGF+V
Sbjct: 9 TRLVGLLGYPVRHSLSPLMHNMAFQHLGLDYVYLVFEVKEDNLKEAVDAMKTLDVAGFNV 68
Query: 295 GIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALRERQG 354
+P+K+ + DE+ A+ IG+VNT++ + +G L GYNTD + + + D +G
Sbjct: 69 TMPNKQKIIPLLDEISEEARLIGSVNTVVNK--NGHLKGYNTDGKGYVMGLAD-----EG 121
Query: 355 INGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGAR-VIIFNRNYERAKALADAV--- 410
I SP GK V+ GAGGA +++A GA+ + I NR E A+ + + +
Sbjct: 122 I-------SP-EGKTIVIAGAGGASKSVAIQLALEGAKEITILNRTVEAAEEICNIINKN 173
Query: 411 ------SGEALHFEYLHEFFPEKGMILANASAIGMEPNSDQSPVPK-EALKAYELVFDAV 463
S L + E + + N + +GM + ++S + + L +V D V
Sbjct: 174 IPTCKTSATGYEDNELKQQLKEADLFI-NCTNLGMGSHEEKSIISSTDILHPDLIVSDVV 232
Query: 464 YTPRNTRLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRKLVLEQ 517
Y P T+LL A EVG ++G+ M I Q F+L+TG P +++++++L +
Sbjct: 233 YAPPKTKLLHMAEEVGCKTINGLGMIIGQGALAFKLWTGEDMPIEYIKRIILSK 286
>gi|452975134|gb|EME74953.1| shikimate 5-dehydrogenase [Bacillus sonorensis L12]
Length = 278
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 93/285 (32%), Positives = 143/285 (50%), Gaps = 20/285 (7%)
Query: 239 IFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLV--DDVKEFFRTYSGTDFAGFSVGI 296
I+GL+ NPV HS P +HN A + +G Y V DD+++ + GF+V +
Sbjct: 4 IYGLIGNPVAHSMSPDIHNAALKDLSLDGYYHAFRVENDDLEDAVKGMRALGIQGFNVTV 63
Query: 297 PHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALRERQGIN 356
PHK + D + A+ +GAVNT+ R +LVGYNTD E + +++ +L +
Sbjct: 64 PHKVAIMKYLDRIDESARVLGAVNTVRRE--KEELVGYNTDGEGFLKSLKPSLDK----- 116
Query: 357 GVASHTSPIAGKIFVLVGAGGAGRAL-AFGAKSRGARVIIFNRNYERAKALADAVSGE-- 413
P++ +++GAGGA RA+ A R R+ + NR E+A+A SG+
Sbjct: 117 -------PVSELSILIIGAGGAARAIFTTLASERPKRLDVANRTPEKAEAFIQLYSGQTK 169
Query: 414 ALHFEYLHEFFPEKGMILANASAIGMEPNSDQSPVPKEALKAYELVFDAVYTPRNTRLLR 473
A+ E E +L +++GM P+ D P+ K LV D +Y P T LL+
Sbjct: 170 AVSLAEAEEHL-EAYDVLIQTTSVGMHPHVDDVPLSLARAKETCLVCDIIYNPLKTALLK 228
Query: 474 EAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRKLVLEQF 518
EA G ++GV MFI QA F L+TG + M+ +VL +
Sbjct: 229 EAEAKGLHTLNGVGMFIGQAALSFGLWTGHEPDMEKMKSIVLRKL 273
>gi|433654873|ref|YP_007298581.1| shikimate 5-dehydrogenase [Thermoanaerobacterium
thermosaccharolyticum M0795]
gi|433293062|gb|AGB18884.1| shikimate 5-dehydrogenase [Thermoanaerobacterium
thermosaccharolyticum M0795]
Length = 283
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 99/294 (33%), Positives = 157/294 (53%), Gaps = 30/294 (10%)
Query: 232 HINPDTKIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLV--DDVKEFFRTYSGTDF 289
H+N T I+G++ +P+GHS P+LHN AF N +Y+ V +++K+
Sbjct: 2 HVNAKTDIYGIIGHPIGHSLSPLLHNAAFESINLNSVYISFDVYEENLKDAILGIKALGI 61
Query: 290 AGFSVGIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDAL 349
G +V +PHKE + D V AK IGAVNTI + +G L GYNTD ++ +++
Sbjct: 62 KGINVTVPHKENVIKYLDYVSDEAKLIGAVNTI--KNNNGILEGYNTD----VTGFTESI 115
Query: 350 RERQGINGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGAR-VIIFNRNYERAKALAD 408
+E H + GK V++GAGGA RA+A G G R +II NR+ ERAK L+D
Sbjct: 116 KE---------HGMEVEGKNAVILGAGGAARAIAVGLSLTGVRSIIIANRSKERAKNLSD 166
Query: 409 AVSGEA------LHFEYLHEFFPEKGMILANASAIGMEPNSDQSPVPKEALKAYELVFDA 462
+ + ++ L+E ++ IL NA+++GM PN + SPV + + + V+D
Sbjct: 167 YIKNNLDINCTDVTYDDLNEL--KEIDILINATSVGMSPNINLSPVDENVVVKAKFVYDI 224
Query: 463 VYTPRNTRLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRKLVLE 516
+Y P T L A + ++G +M I QA F+++TG +F + ++L
Sbjct: 225 IYNPEKTLFLSYAEKHKIRNLNGFDMLINQANHSFKIWTG----VNFNKNIILN 274
>gi|16332159|ref|NP_442887.1| shikimate 5-dehydrogenase [Synechocystis sp. PCC 6803]
gi|383323902|ref|YP_005384756.1| shikimate 5-dehydrogenase [Synechocystis sp. PCC 6803 substr. GT-I]
gi|383327071|ref|YP_005387925.1| shikimate 5-dehydrogenase [Synechocystis sp. PCC 6803 substr.
PCC-P]
gi|383492955|ref|YP_005410632.1| shikimate 5-dehydrogenase [Synechocystis sp. PCC 6803 substr.
PCC-N]
gi|384438223|ref|YP_005652948.1| shikimate 5-dehydrogenase [Synechocystis sp. PCC 6803]
gi|451816311|ref|YP_007452763.1| shikimate 5-dehydrogenase [Synechocystis sp. PCC 6803]
gi|9087124|sp|P74591.1|AROE_SYNY3 RecName: Full=Shikimate dehydrogenase
gi|1653788|dbj|BAA18699.1| shikimate 5-dehydrogenase [Synechocystis sp. PCC 6803]
gi|339275256|dbj|BAK51743.1| shikimate 5-dehydrogenase [Synechocystis sp. PCC 6803]
gi|359273222|dbj|BAL30741.1| shikimate 5-dehydrogenase [Synechocystis sp. PCC 6803 substr. GT-I]
gi|359276392|dbj|BAL33910.1| shikimate 5-dehydrogenase [Synechocystis sp. PCC 6803 substr.
PCC-N]
gi|359279562|dbj|BAL37079.1| shikimate 5-dehydrogenase [Synechocystis sp. PCC 6803 substr.
PCC-P]
gi|407960196|dbj|BAM53436.1| shikimate 5-dehydrogenase [Bacillus subtilis BEST7613]
gi|451782280|gb|AGF53249.1| shikimate 5-dehydrogenase [Synechocystis sp. PCC 6803]
Length = 290
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 87/300 (29%), Positives = 144/300 (48%), Gaps = 31/300 (10%)
Query: 233 INPDTKIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYV--PMLVDDVKEFFRTYSGTDFA 290
I TK+ G++ PVGHS P++HN A + + YV P+ +D+ +
Sbjct: 4 ITGKTKLLGVIGYPVGHSLSPVMHNAALQAMASDYAYVAFPIAPEDLTIAIAGLGASGVQ 63
Query: 291 GFSVGIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGK-LVGYNTDCESAISAIEDAL 349
G SV IPHK+ + ++ A+ +GAVNT+ R DG G NTD E ++ + +
Sbjct: 64 GLSVTIPHKQVVMPLLTQITETARQVGAVNTLWR---DGHGWQGTNTDVEGFLAPLLELK 120
Query: 350 RERQGINGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRG-ARVIIFNRNYERAKALAD 408
++ +G+ V++G GGA RA+ G G +I+ R+ E+ A+
Sbjct: 121 QDW-------------SGRTAVILGYGGAARAVVVGLTQLGCPEIIVVGRSQEKLAQFAN 167
Query: 409 AVSG-------EALHFEYLHEFFPEKGMILANASAIGMEPNSDQSPVPK---EALKAYEL 458
+ + + L +E L P K +L N++ +GM P+ QSP+ + E L +
Sbjct: 168 SWTDPKIKQALQVLPWEALSTVIP-KASLLINSTPVGMAPHPKQSPLDQSLVEKLPPTAI 226
Query: 459 VFDAVYTPRNTRLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRKLVLEQF 518
+D +YTPR TR L+ A E G + G EM ++Q +++ P D MR+ +L
Sbjct: 227 AYDLIYTPRPTRFLQHAQERGLVTIDGAEMLVQQGAAALKIWLQQEVPVDVMRQALLHHL 286
>gi|311031592|ref|ZP_07709682.1| shikimate 5-dehydrogenase [Bacillus sp. m3-13]
Length = 278
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 85/286 (29%), Positives = 144/286 (50%), Gaps = 22/286 (7%)
Query: 239 IFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLV--DDVKEFFRTYSGTDFAGFSVGI 296
++G++ +P+ HS P++HN AF + Y V D ++ GF+V I
Sbjct: 4 LYGVIGSPIAHSMSPLIHNDAFLQNGMDAHYHAFHVEPDQLETAVAGMRVLGINGFNVTI 63
Query: 297 PHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALRERQGIN 356
PHKE + D V A IGAVNT++ R DG+L+GYNTD + A+++ ++
Sbjct: 64 PHKEAIIPLLDSVDDAALQIGAVNTVVNR--DGELIGYNTDGRGFVEALKEVVK------ 115
Query: 357 GVASHTSPIAGKIFVLVGAGGAGRALAFG-AKSRGARVIIFNRNYERAKALADAVSGEAL 415
+ K +++GAGGA RA+ + A +G ++ I NR +A+ L S E +
Sbjct: 116 --------LKDKHVLIIGAGGAARAILYTLALEKGVQIDICNRTVSKAEDLIREFSLERI 167
Query: 416 HFEYLHEFFP---EKGMILANASAIGMEPNSDQSPVPKEALKAYELVFDAVYTPRNTRLL 472
+ ++ ++ +++GM P + P+P +++K + + D +Y P T+LL
Sbjct: 168 TRSITVDQAAREIQRYDVVVQTTSVGMYPKINDIPLPLKSIKQHAVFTDIIYNPIETKLL 227
Query: 473 REAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRKLVLEQF 518
+EA +GA +G+ MF QA F ++TG M+KLV E
Sbjct: 228 QEAKAIGAITQNGIHMFAYQAALAFEIWTGKFPDTVRMKKLVEEHL 273
>gi|257887461|ref|ZP_05667114.1| quinate/shikimate 5-dehydrogenase [Enterococcus faecium 1,141,733]
gi|293377413|ref|ZP_06623615.1| shikimate dehydrogenase [Enterococcus faecium PC4.1]
gi|293570466|ref|ZP_06681521.1| shikimate 5-dehydrogenase [Enterococcus faecium E980]
gi|424763558|ref|ZP_18191028.1| shikimate dehydrogenase [Enterococcus faecium TX1337RF]
gi|430841215|ref|ZP_19459134.1| shikimate 5-dehydrogenase [Enterococcus faecium E1007]
gi|431035007|ref|ZP_19491884.1| shikimate 5-dehydrogenase [Enterococcus faecium E1590]
gi|431737780|ref|ZP_19526732.1| shikimate 5-dehydrogenase [Enterococcus faecium E1972]
gi|431751761|ref|ZP_19540448.1| shikimate 5-dehydrogenase [Enterococcus faecium E2620]
gi|431756603|ref|ZP_19545235.1| shikimate 5-dehydrogenase [Enterococcus faecium E3083]
gi|431761855|ref|ZP_19550417.1| shikimate 5-dehydrogenase [Enterococcus faecium E3548]
gi|257823515|gb|EEV50447.1| quinate/shikimate 5-dehydrogenase [Enterococcus faecium 1,141,733]
gi|291609412|gb|EFF38679.1| shikimate 5-dehydrogenase [Enterococcus faecium E980]
gi|292643931|gb|EFF62039.1| shikimate dehydrogenase [Enterococcus faecium PC4.1]
gi|402422669|gb|EJV54899.1| shikimate dehydrogenase [Enterococcus faecium TX1337RF]
gi|430493991|gb|ELA70241.1| shikimate 5-dehydrogenase [Enterococcus faecium E1007]
gi|430563722|gb|ELB02931.1| shikimate 5-dehydrogenase [Enterococcus faecium E1590]
gi|430598386|gb|ELB36127.1| shikimate 5-dehydrogenase [Enterococcus faecium E1972]
gi|430615055|gb|ELB52025.1| shikimate 5-dehydrogenase [Enterococcus faecium E2620]
gi|430620457|gb|ELB57259.1| shikimate 5-dehydrogenase [Enterococcus faecium E3083]
gi|430624547|gb|ELB61197.1| shikimate 5-dehydrogenase [Enterococcus faecium E3548]
Length = 284
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 98/299 (32%), Positives = 151/299 (50%), Gaps = 36/299 (12%)
Query: 233 INPDTKIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYV-----PMLVDDVKEFFRTYSGT 287
I+ TK+ GL ++P HS P++HN AF + +Y+ PM + E RT+
Sbjct: 2 ISGQTKLAGLFADPASHSLSPLMHNTAFEANNIDAVYLAFKVNPMNLKQAVESIRTF--- 58
Query: 288 DFAGFSVGIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIED 347
D G ++ +P+K + DEV A+ IGAVNTI+ G+L+GYNTD + ++++
Sbjct: 59 DMLGVNLSMPNKTAVIPYLDEVSQEAQLIGAVNTIVHEK--GRLIGYNTDGAGFMQSVQE 116
Query: 348 ALRERQGINGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGAR-VIIFNRN------- 399
A GI+ + K L+GAGGA +A+ A GA+ ++++ RN
Sbjct: 117 A-----GIS--------VKKKKVTLLGAGGAAKAVTVQAALDGAKEIVVYKRNNQTFAQV 163
Query: 400 YERAKALADAVSGEALHFEYLHEFFPEKGM----ILANASAIGMEPNSDQSPVPKEALKA 455
E + L+ S E ++ + K + +L NA+ IGM DQSP+ +
Sbjct: 164 KETFEQLSYRTSCEIKVRDFADTYQLRKDLKESCLLVNATDIGMGKKIDQSPLLDINMMH 223
Query: 456 YEL-VFDAVYTPRNTRLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRKL 513
+L VFD +Y PR TRLL+EA +VGA +G+ M I Q F L+T P + KL
Sbjct: 224 EKLAVFDLIYAPRETRLLKEAKKVGAKGYNGLGMLIYQGAIAFELWTKEKMPIHVIEKL 282
>gi|407978440|ref|ZP_11159271.1| shikimate 5-dehydrogenase [Bacillus sp. HYC-10]
gi|407414998|gb|EKF36614.1| shikimate 5-dehydrogenase [Bacillus sp. HYC-10]
Length = 280
Score = 136 bits (343), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 91/287 (31%), Positives = 147/287 (51%), Gaps = 22/287 (7%)
Query: 239 IFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLVD--DVKEFFRTYSGTDFAGFSVGI 296
++GL+ PVGHS P +HN A + +G Y V+ D+ + +GF+V +
Sbjct: 4 LYGLIGYPVGHSMSPDIHNAALKDAGIDGHYHGFQVEEHDLADAVSGMKALGISGFNVTV 63
Query: 297 PHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALRERQGIN 356
PHK + D++ A+ + AVNT+ R G+LVGYNTD E + ++ +AL +
Sbjct: 64 PHKVEIMQYLDKIDVTAERLRAVNTV--RLEKGQLVGYNTDGEGFLHSLLEALDQ----- 116
Query: 357 GVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGARVI-IFNRNYERAKALADAVSGE-- 413
P++ F+++GAGGA RA+ + I NR E+A++L ++ G+
Sbjct: 117 -------PLSELSFLMIGAGGAARAIYMTMAEYAPKSFDITNRTIEKAESLIESAEGKIT 169
Query: 414 --ALHFEYLHEFFPEKGMILANASAIGMEPNSDQSPVPKEALKAYELVFDAVYTPRNTRL 471
A+ E +I+ + ++IGM PN +++P+ K +V D VY P T+L
Sbjct: 170 SSAIPLNQAEERLGNYDVII-HTTSIGMYPNVEETPISLTKAKKTAVVCDIVYNPIETKL 228
Query: 472 LREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRKLVLEQF 518
L EAA +G V GV MF+ QA F L+TG M+ +V+E+
Sbjct: 229 LSEAAGLGLKTVDGVGMFVGQAARAFELWTGITPDARKMKSIVIEKL 275
>gi|194476868|ref|YP_002049047.1| shikimate / quinate 5-dehydrogenase [Paulinella chromatophora]
gi|171191875|gb|ACB42837.1| shikimate / quinate 5-dehydrogenase [Paulinella chromatophora]
Length = 304
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 93/309 (30%), Positives = 152/309 (49%), Gaps = 40/309 (12%)
Query: 237 TKIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLVDD--VKEFFRTYSGTDFAGFSV 294
T + G++ NPV HS PI+HN A + N +Y+P+ +++ ++ + S D GF++
Sbjct: 7 TALVGILGNPVSHSLSPIMHNAALKSLGLNWLYIPLPINNTSLEILVQNLSNIDCRGFNI 66
Query: 295 GIPHKEPAVACCDEVHPLAKSIGAVNTIIRRP-IDGKLVGYNTDCESAISAIEDALRERQ 353
IPHKE E+ P+AK +GAVNT IR P + +G NTD E I+++++
Sbjct: 67 TIPHKEIIAQLATELTPIAKRVGAVNTFIREPNTNNGWLGTNTDVEGFINSLKN------ 120
Query: 354 GINGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGA---RVI--------IFNRNYER 402
+H + ++ K V++G GG+ RA+ G RVI F NY+
Sbjct: 121 ------NHIN-LSQKRAVILGCGGSARAILVALVELGVASIRVIGRDIYKLTKFTDNYQY 173
Query: 403 AKALADAVSGEALHFEYLHEFFPEKGM----ILANASAIGMEPNSDQS-----PVPK--- 450
AV+ + L EK + ++ N + IGM S S P+ +
Sbjct: 174 LHPDLSAVTWNETESKELELKLFEKTLTNADLIVNTTPIGMTNVSISSSALLSPLTESYL 233
Query: 451 EALKAYELVFDAVYTPRNTRLLREAAEVGATVVSGVEMFIRQALGQFRLFTG-GLAPEDF 509
+ LK+ +++D +YTPR T LL+++AE G + G+EM + Q +L+TG P +
Sbjct: 234 DRLKSNVVIYDLIYTPRPTVLLKKSAERGFICIDGLEMLVEQGAASLKLWTGLKSVPTNI 293
Query: 510 MRKLVLEQF 518
MR L +
Sbjct: 294 MRNSALNKL 302
>gi|188997216|ref|YP_001931467.1| shikimate 5-dehydrogenase [Sulfurihydrogenibium sp. YO3AOP1]
gi|188932283|gb|ACD66913.1| shikimate 5-dehydrogenase [Sulfurihydrogenibium sp. YO3AOP1]
Length = 279
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 89/291 (30%), Positives = 148/291 (50%), Gaps = 31/291 (10%)
Query: 236 DTKIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLV--DDVKEFFRTYSGTDFAGFS 293
+T ++G+ PV HSK P AF+H N +YVP V +D+++ + D G +
Sbjct: 6 NTLVYGIFGYPVKHSKSPTFQTAAFQHLGINAVYVPFQVKPEDIEKAVESLRVLDIKGVN 65
Query: 294 VGIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALRERQ 353
V IPHKE + +E+ K I AVNTI + IDG L+GYNTD I +++ + +
Sbjct: 66 VTIPHKENVIPYLNEISEEVKVIKAVNTI--KNIDGYLIGYNTDWYGFIEGLKEIMPD-- 121
Query: 354 GINGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGA-RVIIFNRNYERAKALADAVSG 412
IAGK +++GAGG+ RA+ +G ++GA ++ + NR +RA+ L + S
Sbjct: 122 -----------IAGKRVLVIGAGGSSRAIIYGLLNQGAGKIYLANRTIQRAENLIEDFSN 170
Query: 413 ---------EALHFEYLHEFFPEKGMILANASAIGMEPNSDQSPVPKEALKAYELVFDAV 463
+ + E ++ E +I+ N +++G+ + D + + V D +
Sbjct: 171 FYRIVKMIIKPISLEEINRILNEVELIV-NTTSVGLNED-DPEIFDYNLINSSHTVVDII 228
Query: 464 YTPRNTRLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRKLV 514
Y + T+LLR+A E A +G M I Q F ++TG AP + M+K +
Sbjct: 229 Y--KETKLLRKAKEKNAKYQNGYPMLIYQGAKSFEIWTGKPAPIEVMKKAI 277
>gi|145577911|gb|ABP82674.1| shikimate 5-dehydrogenase [Bacillus thuringiensis serovar kenyae]
Length = 238
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 88/252 (34%), Positives = 134/252 (53%), Gaps = 26/252 (10%)
Query: 250 SKGPILHNPAFRHTRFNGIYVPMLVDD--VKEFFRTYSGTDFAGFSVGIPHKEPAVACCD 307
S P++HN AF H + Y LV++ + E R +GF+V PHK + D
Sbjct: 1 SLSPVMHNDAFEHLNMDAHYHAFLVEEELLGEAVRGLKALGISGFNVTTPHKVAIMEYLD 60
Query: 308 EVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALRERQGINGVASHTSPIAG 367
E+ PLA+ IGAVNT++ + DG+L+GYNTD + A++ E P+ G
Sbjct: 61 EIDPLARKIGAVNTVVHK--DGRLIGYNTDGIGFVRALQSISNE------------PLQG 106
Query: 368 KIFVLVGAGGAGRALAFGAKSRGARVI-IFNRNYERAKALADA----VSGEALHFEYLHE 422
K +L+G+GGA RA+ F G + I + NR ++AK L A V+ AL E E
Sbjct: 107 KRILLLGSGGASRAIYFSLADVGVKEIDVANRTVDKAKELIAARTADVNSVALSLEKATE 166
Query: 423 FFPEKGM--ILANASAIGMEPNSDQSPVPKEALKAYELVFDAVYTPRNTRLLREAAEVGA 480
E+G I+ + IGM P+ + +P+ +LK +V D +Y P T++L EA E GA
Sbjct: 167 ---EQGNYDIIIQTTTIGMHPHVEYTPLQICSLKKGTIVSDIIYNPFETKILCEAKEQGA 223
Query: 481 TVVSGVEMFIRQ 492
+ +G++MF+ Q
Sbjct: 224 IIQNGIDMFVYQ 235
>gi|161528058|ref|YP_001581884.1| shikimate 5-dehydrogenase [Nitrosopumilus maritimus SCM1]
gi|259585286|sp|A9A233.1|AROE_NITMS RecName: Full=Shikimate dehydrogenase
gi|160339359|gb|ABX12446.1| shikimate 5-dehydrogenase [Nitrosopumilus maritimus SCM1]
Length = 273
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 91/289 (31%), Positives = 149/289 (51%), Gaps = 26/289 (8%)
Query: 238 KIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLV--DDVKEFFRTYSGTDFAGFSVG 295
K F ++ +P+ HS P +H+ AFR + Y+ + D++ E AGF+V
Sbjct: 3 KTFAVIGDPIDHSLSPNIHSAAFRELNLDCSYIAYRIPKDELGEGIEGLKKIQIAGFNVT 62
Query: 296 IPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALRERQGI 355
IPHK + D++ IGAVNT++ DG L GYNTD + + + L++R
Sbjct: 63 IPHKIEMMKYLDKIDESCSLIGAVNTVVSN--DGVLKGYNTDMDGFL----EPLKKRN-- 114
Query: 356 NGVASHTSPIAGKIFVLVGAGGAGRALAFG-AKSRGARVIIFNRNYERAKALAD-----A 409
I +L+GAGGA RA+ G AK + + I NR E+A L + +
Sbjct: 115 -------IEIENSNVLLLGAGGAARAIVAGFAKEKAKSITIANRTIEKANNLVEFAKKIS 167
Query: 410 VSGEALHFEYLHEFFPEKGMILANASAIGMEPNSDQSPVPKEALKAYELVFDAVYTPRNT 469
+ A+ + + E + +I+ NA++IG++ ++ SP+ E + +V+D VY P NT
Sbjct: 168 LDANAITIDQVGESAKDYNIIV-NATSIGLQ--NESSPISFEGVNEKTVVYDIVYLPMNT 224
Query: 470 RLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRKLVLEQF 518
L++A E AT++ G EM + QA+ F ++ G AP + M+K +L F
Sbjct: 225 DFLKKAKEKNATIIFGYEMLLGQAVRAFEIWHGMEAPYNAMKKALLGGF 273
>gi|150402110|ref|YP_001329404.1| shikimate 5-dehydrogenase [Methanococcus maripaludis C7]
gi|166219473|sp|A6VFM7.1|AROE_METM7 RecName: Full=Shikimate dehydrogenase
gi|150033140|gb|ABR65253.1| shikimate 5-dehydrogenase [Methanococcus maripaludis C7]
Length = 280
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 92/284 (32%), Positives = 148/284 (52%), Gaps = 26/284 (9%)
Query: 237 TKIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLV--DDVKEFFRTYSGTDFAGFSV 294
TK+ GL+ +PV HS PI+HN A N +Y+ V +++K GF+V
Sbjct: 6 TKLLGLIGHPVDHSFSPIMHNTAIEDLGINYVYLAFDVSEENLKNVVSGAKALQITGFNV 65
Query: 295 GIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALRERQG 354
IPHK + DE+ AK+IGAVNT+ + +GK +GYNTD A + L E+ G
Sbjct: 66 TIPHKINIMKYLDEIDEDAKAIGAVNTV--KIENGKAIGYNTDGIGA----KRTLEEKAG 119
Query: 355 INGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGARVIIFNRNYERAKALADAVSGE- 413
I + K +++G+GGA RA+ F ++ + I NRN E+AK L++ S +
Sbjct: 120 I---------LIDKNILIIGSGGASRAVCFEL-AKDNNLTIINRNIEKAKILSEEFSKKL 169
Query: 414 ----ALHFEYLHEFFPEKGMILANASAIGMEPNSDQSPV-PKEALKAYELVFDAVYTPRN 468
+++ L +IL N + +GM PN++ PV P + +K +V D +Y P
Sbjct: 170 KKQKPINYGDLDLDIKNFDIIL-NTTPVGMHPNTNVDPVIPLKNIKKDAVVMDLIYNPIE 228
Query: 469 TRLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRK 512
L+EA + GA ++G+ M + Q F ++T G+ P+ ++ K
Sbjct: 229 PVFLKEAIKYGAKTINGLGMLVYQGAVSFEIWT-GMKPDIYVMK 271
>gi|206889174|ref|YP_002248270.1| shikimate 5-dehydrogenase [Thermodesulfovibrio yellowstonii DSM
11347]
gi|226697499|sp|B5YJ55.1|AROE_THEYD RecName: Full=Shikimate dehydrogenase
gi|206741112|gb|ACI20169.1| shikimate 5-dehydrogenase [Thermodesulfovibrio yellowstonii DSM
11347]
Length = 275
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 89/283 (31%), Positives = 147/283 (51%), Gaps = 21/283 (7%)
Query: 233 INPDTKIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLV--DDVKEFFRTYSGTDFA 290
I TKI G+ +P+ H+ P++HN AF + + YV V D +KE +
Sbjct: 2 ITGKTKIIGIFGDPIEHTLSPLIHNEAFSYLGLDYCYVAFNVKKDKLKEAVEAIRALNIR 61
Query: 291 GFSVGIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALR 350
G ++ +PHKE + DE+ K+IGAVNTI+ +G L G+NTD I +++D
Sbjct: 62 GVNITVPHKETVIQYIDELSDEVKNIGAVNTILNN--EGILKGFNTDVNGFILSLKD--- 116
Query: 351 ERQGINGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGARVIIFNRNYERAKALADAV 410
+GI+ + K F+++GAGGA +A+ +G G +V I+NR A A+ +
Sbjct: 117 --EGIS--------MKNKNFLILGAGGAAKAIVYGILKEGGKVYIYNRTPSNALAIKEKF 166
Query: 411 SGEA-LHFEYLHEFFPEKGMILANASAIGMEPNSDQSPVPKEALKAYELVFDAVYTPRNT 469
+ + + EK ++ NA+++G++ + D P+ E +K + D VY T
Sbjct: 167 KKFGFIEIVEMDKSVTEKIDVIVNATSLGLKKD-DPMPLNPELIKPEHVYCDIVYP--ET 223
Query: 470 RLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRK 512
L+REA +G VV G+ M + QA F+++T AP + M+K
Sbjct: 224 PLMREAERIGCKVVGGIGMLLWQAAFAFKIWTEVEAPIEIMKK 266
>gi|145577945|gb|ABP82691.1| shikimate 5-dehydrogenase [Bacillus thuringiensis serovar
graciosensis]
Length = 238
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 90/252 (35%), Positives = 129/252 (51%), Gaps = 26/252 (10%)
Query: 250 SKGPILHNPAFRHTRFNGIYVPMLVDD--VKEFFRTYSGTDFAGFSVGIPHKEPAVACCD 307
S P++HN AF H + Y LV + + E R +GF+V PHK + D
Sbjct: 1 SLSPVMHNDAFEHLSMDAHYHAFLVKEEVLGEAVRGLKALGISGFNVTTPHKVAIMNYLD 60
Query: 308 EVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALRERQGINGVASHTSPIAG 367
E+ PLAK IGAVNT++ + DGKL+GYNTD + A++ E P+
Sbjct: 61 EIDPLAKQIGAVNTVVHK--DGKLIGYNTDGIGFVRALQSISSE------------PLQE 106
Query: 368 KIFVLVGAGGAGRALAFGAKSRGARVI-IFNRNYERAKALADA----VSGEALHFEYLHE 422
K +L+GAGGA RA+ F G + I + NR ++AK L A V AL E E
Sbjct: 107 KRILLLGAGGASRAIYFSLTDVGVKEIDVANRTVDKAKELIAACTATVHSVALSLEKATE 166
Query: 423 FFPEKGM--ILANASAIGMEPNSDQSPVPKEALKAYELVFDAVYTPRNTRLLREAAEVGA 480
E+G I+ + IGM P +P+ +LK +V D +Y P T++L EA E GA
Sbjct: 167 ---EQGNYDIIIQTTTIGMHPRVQHTPLQISSLKKGTIVSDIIYNPFETKILCEAKEQGA 223
Query: 481 TVVSGVEMFIRQ 492
+ +G++MF+ Q
Sbjct: 224 MIQNGIDMFVYQ 235
>gi|386726061|ref|YP_006192387.1| shikimate 5-dehydrogenase [Paenibacillus mucilaginosus K02]
gi|384093186|gb|AFH64622.1| shikimate 5-dehydrogenase [Paenibacillus mucilaginosus K02]
Length = 302
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 104/294 (35%), Positives = 154/294 (52%), Gaps = 23/294 (7%)
Query: 233 INPDTKIFGLVSNPVGHSKGPILHNPAFRHTRFNGIY--VPMLVDDVKEFFRTYSGTDFA 290
++ T ++G+ +PV HSK P++ N AF N Y +L +K+ F
Sbjct: 12 LDSHTILYGVFGDPVRHSKSPVMLNRAFDVAGINAAYGAFHILPGTLKDAVAGIRALGFR 71
Query: 291 GFSVGIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALR 350
G +V +PHK ++ DE+ A+ IGAVNT++ G+L+GYNTD I + L+
Sbjct: 72 GVNVTVPHKLEVMSYLDEIDEGARVIGAVNTVVNE--GGRLIGYNTDGIGYIRS----LK 125
Query: 351 ERQGINGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGA-RVIIFNRNYERAKALADA 409
E GI + G+ +++GAGGA R + + GA + I NR E+A LADA
Sbjct: 126 EETGIE--------LKGRKVLMIGAGGAARGVGYALAQEGAEHIYIANRTKEKALDLADA 177
Query: 410 VSG----EALHFEYLHEFFPEKGMILANASAIGMEPNSDQSPVPKEALKAYELVFDAVYT 465
+ G + +HE + +I+ N + +GM PN D+ P+ ++ +V D +Y
Sbjct: 178 LGGYGSISGHGLDEIHELVGDAALIVNN-TLVGMYPNVDEVPMDISLIREDHVVSDLIYN 236
Query: 466 PRNTRLLREAAE-VGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRKLVLEQF 518
P TRLLREA E GATV SG+ MFI Q F +TG AP + MRK VL+ F
Sbjct: 237 PLETRLLREAREKQGATVHSGLGMFIYQGAYAFEYWTGQPAPVEAMRKAVLDSF 290
>gi|145577897|gb|ABP82667.1| shikimate 5-dehydrogenase [Bacillus mycoides]
Length = 238
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 90/252 (35%), Positives = 129/252 (51%), Gaps = 26/252 (10%)
Query: 250 SKGPILHNPAFRHTRFNGIYVPMLVDD--VKEFFRTYSGTDFAGFSVGIPHKEPAVACCD 307
S P++HN AF H + Y LV + + E R +GF+V PHK + D
Sbjct: 1 SLSPVMHNDAFEHLNMDAHYHAFLVKEEVLGEAVRGLKALGISGFNVTTPHKVAIMNYLD 60
Query: 308 EVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALRERQGINGVASHTSPIAG 367
E+ PLAK IGAVNT++ + DGKL+GYNTD + A++ E P+
Sbjct: 61 EIDPLAKQIGAVNTVVHK--DGKLIGYNTDGIGFVRALQSISSE------------PLQE 106
Query: 368 KIFVLVGAGGAGRALAFGAKSRGARVI-IFNRNYERAKALADA----VSGEALHFEYLHE 422
K +L+GAGGA RA+ F G + I + NR ++AK L A V AL E E
Sbjct: 107 KRILLLGAGGASRAIYFSLADVGVKEIDVANRTVDKAKELIAACTATVHSVALSLEKATE 166
Query: 423 FFPEKGM--ILANASAIGMEPNSDQSPVPKEALKAYELVFDAVYTPRNTRLLREAAEVGA 480
E+G I+ + IGM P +P+ +LK +V D +Y P T++L EA E GA
Sbjct: 167 ---EQGNYDIIIQTTTIGMHPRVQHTPLQISSLKKGTIVSDIIYNPFETKILCEAKEQGA 223
Query: 481 TVVSGVEMFIRQ 492
+ +G++MF+ Q
Sbjct: 224 MIQNGIDMFVYQ 235
>gi|145577947|gb|ABP82692.1| shikimate 5-dehydrogenase [Bacillus thuringiensis serovar
ostriniae]
Length = 238
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 87/252 (34%), Positives = 134/252 (53%), Gaps = 26/252 (10%)
Query: 250 SKGPILHNPAFRHTRFNGIYVPMLVDD--VKEFFRTYSGTDFAGFSVGIPHKEPAVACCD 307
S P++HN AF H + Y LV++ + E R +GF+V PHK + D
Sbjct: 1 SLSPVMHNDAFEHLNMDAHYHAFLVEEEALGEAVRGLKALGISGFNVTTPHKVAIMEYLD 60
Query: 308 EVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALRERQGINGVASHTSPIAG 367
E+ PLA+ IGAVNT++ + +G+L+GYNTD + A++ E P+ G
Sbjct: 61 EIDPLARKIGAVNTVVHK--NGRLIGYNTDGIGFVRALQSISNE------------PLQG 106
Query: 368 KIFVLVGAGGAGRALAFGAKSRGARVI-IFNRNYERAKALADAVSGE----ALHFEYLHE 422
K +L+GAGGA RA+ F G + I + NR ++AK L A + + AL E E
Sbjct: 107 KRILLLGAGGASRAIYFSLADVGVKEIDVANRTVDKAKELIAARTADVHSVALSLEKATE 166
Query: 423 FFPEKGM--ILANASAIGMEPNSDQSPVPKEALKAYELVFDAVYTPRNTRLLREAAEVGA 480
E+G I+ + IGM P+ + +P+ +LK +V D +Y P T++L EA E GA
Sbjct: 167 ---EQGNYDIIIQTTTIGMHPHVEHTPLQMCSLKKGTIVSDIIYNPFETKILCEAKEQGA 223
Query: 481 TVVSGVEMFIRQ 492
+ +G++MF+ Q
Sbjct: 224 IIQNGIDMFVYQ 235
>gi|411120996|ref|ZP_11393368.1| shikimate dehydrogenase [Oscillatoriales cyanobacterium JSC-12]
gi|410709665|gb|EKQ67180.1| shikimate dehydrogenase [Oscillatoriales cyanobacterium JSC-12]
Length = 286
Score = 135 bits (341), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 91/293 (31%), Positives = 145/293 (49%), Gaps = 29/293 (9%)
Query: 233 INPDTKIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLV--DDVKEFFRTYSGTDFA 290
I TK+ G+V +P+ HS PI+HN A + +Y+P V +D+ + ++
Sbjct: 2 ITGTTKLLGVVGHPIEHSLSPIMHNAAIAQLGVDYVYLPFPVKPEDLSQALAGFAAIGVQ 61
Query: 291 GFSVGIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALR 350
GF+V IPHK+ + ++ PLA+++GAVNT+ R + G NTD ++ + +LR
Sbjct: 62 GFNVTIPHKQSIMRLLSDISPLAQAVGAVNTVWRS--ETGWHGTNTDVAGFLAPLR-SLR 118
Query: 351 ERQGINGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRG-ARVIIFNRN------YERA 403
V +++G GGA RA+ G G RV + R+ ++ +
Sbjct: 119 ADWSQTEV------------LILGIGGAARAVVAGCAELGCTRVRVVGRDRAKLEQFQHS 166
Query: 404 KALADAVSGEALH-FEYLHEFFPEKGMILANASAIGMEPNSDQSPVPKE---ALKAYELV 459
A + + H +E L P G+I+ N + IGM PN DQSP+ E L+ +
Sbjct: 167 WAHSPIMVNLQTHLWEALPSLLPMAGLIV-NTTPIGMFPNVDQSPISLEYILHLQPGTIA 225
Query: 460 FDAVYTPRNTRLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRK 512
+D +YTP TR L+ AAE GA + G+EM ++Q L+ P D MR+
Sbjct: 226 YDLIYTPSPTRFLQYAAEHGAITLDGLEMLVQQGAAALELWLQESVPVDVMRR 278
>gi|145577939|gb|ABP82688.1| shikimate 5-dehydrogenase [Bacillus thuringiensis serovar
finitimus]
Length = 238
Score = 135 bits (341), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 89/250 (35%), Positives = 127/250 (50%), Gaps = 22/250 (8%)
Query: 250 SKGPILHNPAFRHTRFNGIYVPMLVDD--VKEFFRTYSGTDFAGFSVGIPHKEPAVACCD 307
S P++HN AF H + Y LV + + E R +GF+V PHK + D
Sbjct: 1 SLSPVMHNDAFEHLNMDAHYHAFLVKEEVLGEAVRGLKALGISGFNVTTPHKVAIMDYLD 60
Query: 308 EVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALRERQGINGVASHTSPIAG 367
E+ PLAK IGAVNT++ + DGKL+GYNTD + A+ E P+
Sbjct: 61 EIDPLAKQIGAVNTVVHK--DGKLIGYNTDGIGFVRALRSISSE------------PLQE 106
Query: 368 KIFVLVGAGGAGRALAFGAKSRGARVI-IFNRNYERAKALADA----VSGEALHFEYLHE 422
K +L+GAGGA RA+ F G + I + NR ++AK L A V AL E E
Sbjct: 107 KRILLLGAGGASRAIYFSLADVGVKEIDVANRTVDKAKELITACMATVHSVALSLEKATE 166
Query: 423 FFPEKGMILANASAIGMEPNSDQSPVPKEALKAYELVFDAVYTPRNTRLLREAAEVGATV 482
E I+ + IGM P + +P+ +LK +V D +Y P T++L EA E GA +
Sbjct: 167 E-QENYDIIIQTTTIGMHPRVEHTPLQISSLKKGTIVSDIIYNPFETKILCEAKEQGAMI 225
Query: 483 VSGVEMFIRQ 492
+G++MF+ Q
Sbjct: 226 QNGIDMFVYQ 235
>gi|145577915|gb|ABP82676.1| shikimate 5-dehydrogenase [Bacillus thuringiensis serovar sotto]
gi|145577925|gb|ABP82681.1| shikimate 5-dehydrogenase [Bacillus thuringiensis serovar alesti]
gi|145577955|gb|ABP82696.1| shikimate 5-dehydrogenase [Bacillus thuringiensis serovar
fukuokaensis]
Length = 238
Score = 135 bits (341), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 88/252 (34%), Positives = 134/252 (53%), Gaps = 26/252 (10%)
Query: 250 SKGPILHNPAFRHTRFNGIYVPMLVDD--VKEFFRTYSGTDFAGFSVGIPHKEPAVACCD 307
S P++HN AF H + Y LV++ + E R +GF+V PHK + D
Sbjct: 1 SLSPVMHNNAFEHLNMDAHYHAFLVEEEVLGEAVRGLKALGISGFNVTTPHKVAIMEYLD 60
Query: 308 EVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALRERQGINGVASHTSPIAG 367
E+ PLA+ IGAVNT++ + +G+L+GYNTD + A++ E P+ G
Sbjct: 61 EIDPLARKIGAVNTVVHK--NGRLIGYNTDGIGFVRALQSISHE------------PLQG 106
Query: 368 KIFVLVGAGGAGRALAFGAKSRGARVI-IFNRNYERAKALADA----VSGEALHFEYLHE 422
K +L+GAGGA RA+ F G + I + NR ++AK L A V+ AL E E
Sbjct: 107 KRILLLGAGGASRAIYFSLADVGVKEIDVANRTVDKAKELIAARTADVNSVALSLEKATE 166
Query: 423 FFPEKGM--ILANASAIGMEPNSDQSPVPKEALKAYELVFDAVYTPRNTRLLREAAEVGA 480
E+G I+ + IGM P+ + +P+ +LK +V D +Y P T++L EA E GA
Sbjct: 167 ---EQGNYDIIIQTTTIGMHPHVEHTPLQICSLKKGTIVSDIIYNPFETKILCEAKEQGA 223
Query: 481 TVVSGVEMFIRQ 492
+ +G++MF+ Q
Sbjct: 224 IIQNGIDMFVYQ 235
>gi|428203364|ref|YP_007081953.1| shikimate 5-dehydrogenase [Pleurocapsa sp. PCC 7327]
gi|427980796|gb|AFY78396.1| shikimate 5-dehydrogenase [Pleurocapsa sp. PCC 7327]
Length = 288
Score = 135 bits (341), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 85/301 (28%), Positives = 146/301 (48%), Gaps = 28/301 (9%)
Query: 230 LEHINPDTKIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLV--DDVKEFFRTYSGT 287
++ I TK+ G++ +PV HS P++HN A H R N +YVP V D+++ +
Sbjct: 1 MQLITGKTKLLGVIGDPVEHSLSPVMHNAAIAHLRVNYVYVPFPVKGKDLEKAIAGFEAI 60
Query: 288 DFAGFSVGIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIED 347
GF++ IPHK+ + EV A+ +GAVNT+ R + G NTD E ++ +++
Sbjct: 61 GVVGFNITIPHKQAIIPLLSEVSAAAQLVGAVNTVWR--TEAGWCGTNTDVEGFLAPLKE 118
Query: 348 ALRERQGINGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGA-RVIIFNRNYERAKAL 406
R+ + +PI ++G GGA RA+ G G ++ + R+ + +
Sbjct: 119 LDRDW-------TQVTPI------ILGNGGAARAVVVGCAEIGCPKIRVVGRDRTKLEKF 165
Query: 407 ADAVSGEALHFEY-LHEF-----FPEKGMILANASAIGMEPNSDQSPVPK---EALKAYE 457
+ AL E +HE+ +L N + +GM P ++SPV E +
Sbjct: 166 KQSWQNSALKTEIEVHEWSELAELVSDTKLLVNTTPVGMYPKVNESPVDAVVMEKMPTDA 225
Query: 458 LVFDAVYTPRNTRLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRKLVLEQ 517
+ +D +YTP T+ L A E GA + G++M + Q +++ P D MR+ L+Q
Sbjct: 226 IAYDLIYTPNPTQFLVRAKERGAKAIDGLKMLVEQGASALKIWLQQPVPVDVMRR-SLQQ 284
Query: 518 F 518
+
Sbjct: 285 Y 285
>gi|325958381|ref|YP_004289847.1| shikimate dehydrogenase [Methanobacterium sp. AL-21]
gi|325329813|gb|ADZ08875.1| Shikimate dehydrogenase [Methanobacterium sp. AL-21]
Length = 286
Score = 135 bits (341), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 106/297 (35%), Positives = 149/297 (50%), Gaps = 31/297 (10%)
Query: 233 INPDTKIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLV--DDVKEFFRTYSGTDFA 290
I T +FG++ +PV HS P +HN AF+ + IYVP V + +++
Sbjct: 2 ITGKTNVFGIIGDPVEHSLSPGMHNAAFKELGMDNIYVPFQVKAEHLEDAILGAQSLGVK 61
Query: 291 GFSVGIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALR 350
GF+V IPHK + D + A IGAVNTI +G VG+NTD A+ AIE+
Sbjct: 62 GFNVTIPHKTEVINYLDYLDIAAGLIGAVNTI-EFGKNGA-VGHNTDGIGAVMAIEE--- 116
Query: 351 ERQGINGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGA-RVIIFNRNYERAKAL-AD 408
+P+ K V++GAGGA RA+AF G ++I NR E+A L D
Sbjct: 117 -----------VTPVKNKKVVILGAGGASRAIAFQLLLSGVDNLVIANRTVEKAGELKTD 165
Query: 409 AVSGEALHFEY----LHEFFPEK---GMILANASAIGMEPNSDQSPV-PKEALKAYELVF 460
V E L E L E ++ IL N + +GM PN D+ PV E + +V
Sbjct: 166 LV--EKLDHEVRVSGLDENLTQELSDTAILINTTPVGMYPNVDEKPVVTAEMMHPDMVVN 223
Query: 461 DAVYTPRNTRLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAP-EDFMRKLVLE 516
D VY P T LL EA + GA +SG++M + Q + F+++TG P E F R L+ E
Sbjct: 224 DIVYNPLKTGLLNEADKAGAKSISGIKMLMYQGVEAFKIWTGIEPPVEIFQRALMNE 280
>gi|145577917|gb|ABP82677.1| shikimate 5-dehydrogenase [Bacillus thuringiensis serovar
thompsoni]
Length = 238
Score = 135 bits (341), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 88/252 (34%), Positives = 133/252 (52%), Gaps = 26/252 (10%)
Query: 250 SKGPILHNPAFRHTRFNGIYVPMLVDD--VKEFFRTYSGTDFAGFSVGIPHKEPAVACCD 307
S P++HN AF H + Y LV++ + E R +GF+V PHK + D
Sbjct: 1 SLSPVMHNDAFEHLNMDAHYHAFLVEEELLGEAVRGLKALGISGFNVTTPHKVAIMEYLD 60
Query: 308 EVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALRERQGINGVASHTSPIAG 367
E+ PLA+ IGAVNT++ + DG+L+GYNTD + A++ E P+ G
Sbjct: 61 EIDPLARKIGAVNTVVHK--DGRLIGYNTDGIGFVRALQSISNE------------PLQG 106
Query: 368 KIFVLVGAGGAGRALAFGAKSRGARVI-IFNRNYERAKALADA----VSGEALHFEYLHE 422
K +L+G+GGA RA+ F G + I + NR +AK L A V+ AL E E
Sbjct: 107 KRILLLGSGGASRAIYFSLADVGVKEIDVANRTVNKAKELIAARTADVNSVALSLEKATE 166
Query: 423 FFPEKGM--ILANASAIGMEPNSDQSPVPKEALKAYELVFDAVYTPRNTRLLREAAEVGA 480
E+G I+ + IGM P+ + +P+ +LK +V D +Y P T++L EA E GA
Sbjct: 167 ---EQGNYDIIIQTTTIGMHPHVEYTPLQICSLKKGTIVSDIIYNPFQTKILCEAKEQGA 223
Query: 481 TVVSGVEMFIRQ 492
+ +G++MF+ Q
Sbjct: 224 IIQNGIDMFVYQ 235
>gi|430822290|ref|ZP_19440869.1| shikimate 5-dehydrogenase [Enterococcus faecium E0120]
gi|430864786|ref|ZP_19480611.1| shikimate 5-dehydrogenase [Enterococcus faecium E1574]
gi|431743724|ref|ZP_19532600.1| shikimate 5-dehydrogenase [Enterococcus faecium E2071]
gi|430443348|gb|ELA53333.1| shikimate 5-dehydrogenase [Enterococcus faecium E0120]
gi|430553567|gb|ELA93253.1| shikimate 5-dehydrogenase [Enterococcus faecium E1574]
gi|430606513|gb|ELB43864.1| shikimate 5-dehydrogenase [Enterococcus faecium E2071]
Length = 284
Score = 135 bits (341), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 97/299 (32%), Positives = 152/299 (50%), Gaps = 36/299 (12%)
Query: 233 INPDTKIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYV-----PMLVDDVKEFFRTYSGT 287
I+ TK+ GL ++P HS P++HN AF + +Y+ PM + E RT+
Sbjct: 2 ISGQTKLAGLFADPASHSLSPLMHNTAFEANNIDAVYLAFQVNPMNLKQAVESIRTF--- 58
Query: 288 DFAGFSVGIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIED 347
D G ++ +P+K + DEV A+ IGAVNTI+ G+L+GYNTD + ++++
Sbjct: 59 DMLGVNLSMPNKTAVIPYLDEVSQEAQLIGAVNTIVHEK--GRLIGYNTDGAGFMQSVQE 116
Query: 348 ALRERQGINGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGAR-VIIFNRN---YERA 403
A GI+ I K L+GAGGA +A+ A GA ++++ RN + +
Sbjct: 117 A-----GIS--------IKKKKMTLLGAGGAAKAVTVQAALDGAEEIVVYKRNNQTFAQV 163
Query: 404 KALADAVSG------EALHFEYLHEFFPE--KGMILANASAIGMEPNSDQSPVPKEALKA 455
K + +S + F H+ + + +L NA+ IGM +QSP+ ++
Sbjct: 164 KETFEQLSYRTSCKIKVRDFADTHQLRKDLKESCLLVNATDIGMGKKINQSPLLDISMMH 223
Query: 456 YEL-VFDAVYTPRNTRLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRKL 513
+L VFD +Y PR TRLL+EA +VGA +G+ M I Q F L+T P + KL
Sbjct: 224 EDLAVFDLIYAPRETRLLKEAKKVGAKGYNGLGMLIYQGAIAFELWTKEKMPIHVIEKL 282
>gi|448698250|ref|ZP_21698889.1| shikimate 5-dehydrogenase [Halobiforma lacisalsi AJ5]
gi|445780869|gb|EMA31739.1| shikimate 5-dehydrogenase [Halobiforma lacisalsi AJ5]
Length = 268
Score = 135 bits (341), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 117/285 (41%), Positives = 144/285 (50%), Gaps = 34/285 (11%)
Query: 238 KIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPM--LVDDVKEFFRTYSGTDFAGFSVG 295
+FGLV NPVGHS P +H A+ + YV DD++ + AG +V
Sbjct: 2 DVFGLVGNPVGHSLSPPMHEVAYDALEIDARYVTFEPAPDDLETALEGAAALGIAGLNVT 61
Query: 296 IPHKEPAVA----CCDEVHPLAKSIGAVNTII---RRPIDGKLVGYNTDCESAISAIEDA 348
IP KE A+A DE LA IGAVNTI RP G+NTD A+ A
Sbjct: 62 IPFKEDALASDLVAADE---LANRIGAVNTIDFSGDRP-----TGHNTDAAGALRA---- 109
Query: 349 LRERQGINGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGARVIIFNRNYERAKALAD 408
LRER + G V+VGAGGAGRA++FG GA V I NR +A LAD
Sbjct: 110 LRERD---------VTVDGARAVVVGAGGAGRAISFGLADAGATVSIANRTEAKAHDLAD 160
Query: 409 AVSGEALH-FEYLHEFFPEKGMILANASAIGMEPNSDQSPVPKEALKAYELVFDAVYTPR 467
V G H E L + + IL NA+++GME D +PVP EAL V DAVY P
Sbjct: 161 EVPGATGHGLETLEDLLADA-EILVNATSVGME--EDATPVPAEALHGGLAVLDAVYRPL 217
Query: 468 NTRLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRK 512
TRLL +AA GAT V G M + Q + F L+TG AP M +
Sbjct: 218 ETRLLSDAAAAGATTVDGARMLLYQGVEAFELWTGRDAPVSTMDE 262
>gi|124486464|ref|YP_001031080.1| hypothetical protein Mlab_1652 [Methanocorpusculum labreanum Z]
gi|124364005|gb|ABN07813.1| shikimate 5-dehydrogenase [Methanocorpusculum labreanum Z]
Length = 473
Score = 135 bits (341), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 140/522 (26%), Positives = 226/522 (43%), Gaps = 81/522 (15%)
Query: 12 CTQLECETTEEMQASIEQAKVEGADLVELCIDSMEFSHISEVDKLIQHPTLPAIVSY--- 68
C + + E++ E+A +GA+ +E +DS P +PA +S+
Sbjct: 5 CAVIVAKDEREVRTLSEEAISKGAEALEFRLDSF--------------PVIPADLSFLSC 50
Query: 69 ---RLKSSRKSSDEACKNTCLQVLRRALDLDVEFVEMDYEVASDPLMSEIIYSRSNTKII 125
+ + R DE K ++ RAL +++++ + ++ + + +
Sbjct: 51 GVPSIATLRSPLDEERK----EIFIRALSSGATYIDIESD--------SVLRGQFPKEQV 98
Query: 126 VSSYLNGGGKPTTEKLGDVIACMQATGADVMKLEIAVDSITDLAPVFE---MLTHCQVPL 182
+ SY + P +++ + +Q++G + K V DL V+ +L P
Sbjct: 99 ICSYHDFEKTPADDEILTIFKDLQSSG--IPKAAFMVRGPADLLAVWNAASVLRERGYPF 156
Query: 183 IALAVGSRGLISQLLGPKFGGFLVYGSLGGK--SVPGLPTLVSLKQVYQLEHINPDTKIF 240
I + +G+ G ++++ + G L Y +L + S PG TL + E + D +I
Sbjct: 157 IFIGMGAAGEVTRIRAAELGSMLNYCALRPELASAPGQITL------EEAERLGTDPQIT 210
Query: 241 GLVSNPVGHSKGPILHNPAFRHTRFNGIY---------VPMLVDDVKEFFRTYSGTDFAG 291
+ P+ H+ P +HN AF+ + G Y VP++ D +K++ G
Sbjct: 211 AVTGYPLTHTFSPEIHNAAFKAAKIRGRYVKIPAASQEVPLIPDVIKKY-------RIIG 263
Query: 292 FSVGIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALRE 351
+V IPHKE + + PLA+S GAVNTI P L GYNTD I I +L
Sbjct: 264 MNVTIPHKESVIPLLKRIDPLAESAGAVNTIRNSP--AGLEGYNTD----ILGIAASL-- 315
Query: 352 RQGINGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGARVIIFNRNYERAKALADAVS 411
+ P + ++ G A A A+ KS GAR+ I NR + RA+ LA+
Sbjct: 316 ------ASVDMDPKDADVLIIGAGGAAKAAAAY-LKSAGARLSITNRTHSRAETLAEIFG 368
Query: 412 GEALHFEYLHEFFPEKGMILANASAIGMEPNSDQSPVPKEALKAYELVFDAVYTPRNTRL 471
A+ E + PE +IL NA+ GM SPVP +V D +Y P T L
Sbjct: 369 ARAVKLE---DLAPEYQLIL-NATPAGMSGFEHCSPVPNTLFTKDTVVMDMIYDPEVTPL 424
Query: 472 LREAAEVGA-TVVSGVEMFIRQALGQFRLFTGGLAPEDFMRK 512
L A G ++G M I QA F L+TG D MRK
Sbjct: 425 LAAAKAAGVRACINGKTMLIEQAAASFTLWTGITPNRDVMRK 466
>gi|145577905|gb|ABP82671.1| shikimate 5-dehydrogenase [Bacillus weihenstephanensis]
Length = 238
Score = 135 bits (341), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 86/251 (34%), Positives = 132/251 (52%), Gaps = 22/251 (8%)
Query: 250 SKGPILHNPAFRHTRFNGIYVPMLVDD--VKEFFRTYSGTDFAGFSVGIPHKEPAVACCD 307
S P++HN AF H + Y LV++ + E + +GF+V PHK + D
Sbjct: 1 SLSPVMHNDAFEHLNMDAHYHAFLVEEEALGEAVKGLKALGISGFNVTTPHKVAIMEYLD 60
Query: 308 EVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALRERQGINGVASHTSPIAG 367
E+ PLA+ IGAVNT++ R DGKL+GYNTD + A++ + P+
Sbjct: 61 EIAPLARQIGAVNTVVHR--DGKLIGYNTDGIGFVRALQSISED------------PLQE 106
Query: 368 KIFVLVGAGGAGRALAFGAKSRGARVI-IFNRNYERAKAL----ADAVSGEALHFEYLHE 422
K +L+GAGGA RA+ F G + I I NR ++AK L + V+ AL E E
Sbjct: 107 KRILLIGAGGASRAIYFSLADVGVKEIDIANRTRDKAKNLISGCMENVNSHALSLECAAE 166
Query: 423 FFPEKGMILANASAIGMEPNSDQSPVPKEALKAYELVFDAVYTPRNTRLLREAAEVGATV 482
E +I+ + IGM P+ + +P+ +LK +V D +Y P T++L +A E GA +
Sbjct: 167 NQGEYDIII-QTTTIGMHPHVEYTPLEIRSLKQGTIVSDIIYNPFETKILGDAKEQGAII 225
Query: 483 VSGVEMFIRQA 493
+G++MF+ Q
Sbjct: 226 QNGIDMFVYQG 236
>gi|392404471|ref|YP_006441083.1| shikimate dehydrogenase [Turneriella parva DSM 21527]
gi|390612425|gb|AFM13577.1| shikimate dehydrogenase [Turneriella parva DSM 21527]
Length = 312
Score = 135 bits (341), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 95/320 (29%), Positives = 153/320 (47%), Gaps = 48/320 (15%)
Query: 233 INPDTKIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLVDDVKEFFRTYSGTDFAGF 292
I+ TK++G++ NP+ H+ P +HN AF + N +Y+ + ++ + + + G
Sbjct: 3 IDAATKVYGIIGNPLSHTFSPAMHNAAFAARKINAVYLAFPLKNLIQLKYSMKQWNIQGL 62
Query: 293 SVGIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALRER 352
SV IP+K D + PLA IG+VNT++ G L GYNTD A+ ALR+
Sbjct: 63 SVTIPYKISIRRLLDRIDPLALQIGSVNTVVWGK-TGLLEGYNTDGPGAMM----ALRKS 117
Query: 353 QGINGVASHTSPIAGKIFVLVGAGGAGRALAFG-AKSRGARVIIFNRNYERAKALADAVS 411
Q + GK +++G+GG+ R++AF + + A + I RN A LA ++
Sbjct: 118 Q---------VSLKGKKILVIGSGGSARSIAFALTQEKPAEIGILARNPMMAMQLARNLT 168
Query: 412 GE------ALHFE--------YLHEFFPEKGM-----------------ILANASAIGME 440
ALH + L + P+ G I+ N + +GM
Sbjct: 169 LNSENPQVALHLQPQGKSLQKSLIDLMPQSGRKWLSQPYTSAEQLHHYDIVINTTPMGMR 228
Query: 441 PNS--DQSPVPKEALKAYELVFDAVYTPRNTRLLREAAEVGATVVSGVEMFIRQALGQFR 498
+S +SP+ L ++ +FD VY P T L++ A + G +V G +M + Q + QF
Sbjct: 229 GSSAAAESPLKSAELAKHQTIFDIVYNPAETPLIKAAKKRGCKIVLGYKMLMYQGVLQFE 288
Query: 499 LFTGGLAPEDFMRKLVLEQF 518
LFTG AP D M K +L +
Sbjct: 289 LFTGKPAPVDAMEKALLAEI 308
>gi|15669272|ref|NP_248077.1| shikimate 5-dehydrogenase [Methanocaldococcus jannaschii DSM 2661]
gi|2492956|sp|Q58484.1|AROE_METJA RecName: Full=Shikimate dehydrogenase
gi|1591730|gb|AAB99086.1| shikimate 5-dehydrogenase (aroE) [Methanocaldococcus jannaschii DSM
2661]
Length = 282
Score = 135 bits (341), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 105/296 (35%), Positives = 156/296 (52%), Gaps = 27/296 (9%)
Query: 233 INPDTKIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVP--MLVDDVKEFFRTYSGTDFA 290
IN TK+ GL+ +PV HS PI+HN AF+ N +YV +L +++K
Sbjct: 2 INAKTKVIGLIGHPVEHSFSPIMHNAAFKDKGLNYVYVAFDVLPENLKYVIDGAKALGIV 61
Query: 291 GFSVGIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALR 350
GF+V IPHK + DE+ A+ IGAVNTI + DGK +GYNTD A A+E+ +
Sbjct: 62 GFNVTIPHKIEIMKYLDEIDKDAQLIGAVNTI--KIEDGKAIGYNTDGIGARMALEEEI- 118
Query: 351 ERQGINGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGARVIIFNRNYERAKALADAV 410
+ K V+ GAGGA RA+AF ++ +II NR E+A+ALA +
Sbjct: 119 ------------GRVKDKNIVIYGAGGAARAVAFEL-AKDNNIIIANRTVEKAEALAKEI 165
Query: 411 S-------GEALHFEYLHEFFPEKGMILANASAIGMEPNSDQSPVPK-EALKAYELVFDA 462
+ GE + F L +I+ NA+ IGM PN D P+ K E L+ +V D
Sbjct: 166 AEKLNKKFGEEVKFSGLDVDLDGVDIII-NATPIGMYPNIDVEPIVKAEKLREDMVVMDL 224
Query: 463 VYTPRNTRLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRKLVLEQF 518
+Y P T LL+EA +V A ++G+ M I Q F+++TG + M+ ++++
Sbjct: 225 IYNPLETVLLKEAKKVNAKTINGLGMLIYQGAVAFKIWTGVEPNIEVMKNAIIDKI 280
>gi|379723334|ref|YP_005315465.1| shikimate 5-dehydrogenase [Paenibacillus mucilaginosus 3016]
gi|378572006|gb|AFC32316.1| shikimate 5-dehydrogenase [Paenibacillus mucilaginosus 3016]
Length = 302
Score = 135 bits (341), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 104/294 (35%), Positives = 154/294 (52%), Gaps = 23/294 (7%)
Query: 233 INPDTKIFGLVSNPVGHSKGPILHNPAFRHTRFNGIY--VPMLVDDVKEFFRTYSGTDFA 290
++ T ++G+ +PV HSK P++ N AF N Y +L +K+ F
Sbjct: 12 LDSHTILYGVFGDPVRHSKSPVMLNRAFDVAGINAAYGAFHILPGTLKDAVAGIRALGFR 71
Query: 291 GFSVGIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALR 350
G +V +PHK ++ DE+ A+ IGAVNT++ G+L+GYNTD I + L+
Sbjct: 72 GVNVTVPHKLEVMSYLDEIDEGARVIGAVNTVVNE--GGRLIGYNTDGIGYIRS----LK 125
Query: 351 ERQGINGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGA-RVIIFNRNYERAKALADA 409
E GI + G+ +++GAGGA R + + GA + I NR E+A LADA
Sbjct: 126 EETGIE--------LKGRKVLMIGAGGAARGVGYALAQEGAEHIYIANRTKEKALDLADA 177
Query: 410 VSG----EALHFEYLHEFFPEKGMILANASAIGMEPNSDQSPVPKEALKAYELVFDAVYT 465
+ G + +HE + +I+ N + +GM PN D+ P+ ++ +V D +Y
Sbjct: 178 LGGYGSISGHGLDEIHELAGDAALIVNN-TLVGMYPNVDEVPMDISLIREDHVVSDLIYN 236
Query: 466 PRNTRLLREAAE-VGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRKLVLEQF 518
P TRLLREA E GATV SG+ MFI Q F +TG AP + MRK VL+ F
Sbjct: 237 PLETRLLREAREKQGATVHSGLGMFIYQGAYAFEYWTGQPAPVEAMRKAVLDSF 290
>gi|145577909|gb|ABP82673.1| shikimate 5-dehydrogenase [Bacillus thuringiensis serovar higo]
Length = 238
Score = 135 bits (340), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 88/252 (34%), Positives = 133/252 (52%), Gaps = 26/252 (10%)
Query: 250 SKGPILHNPAFRHTRFNGIYVPMLVDD--VKEFFRTYSGTDFAGFSVGIPHKEPAVACCD 307
S P++HN AF H + Y LV++ + E R +GF+V PHK + D
Sbjct: 1 SLSPVMHNDAFEHLNMDAHYHAFLVEEELLGEAVRGLKALGISGFNVTTPHKVAIMEYLD 60
Query: 308 EVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALRERQGINGVASHTSPIAG 367
E+ PLA+ IGAVNT++ + DG+L+GYNTD + A++ E P+ G
Sbjct: 61 EIDPLARKIGAVNTVVHK--DGRLIGYNTDGIGFVRALQSISNE------------PLQG 106
Query: 368 KIFVLVGAGGAGRALAFGAKSRGARVI-IFNRNYERAKALADA----VSGEALHFEYLHE 422
K +L+G+GGA RA+ F G + I + NR +AK L A V+ AL E E
Sbjct: 107 KRILLLGSGGASRAIYFSLADVGVKEIDVANRTVNKAKELIAARTADVNSVALSLEKATE 166
Query: 423 FFPEKGM--ILANASAIGMEPNSDQSPVPKEALKAYELVFDAVYTPRNTRLLREAAEVGA 480
E+G I+ + IGM P+ + +P+ +LK +V D +Y P T++L EA E GA
Sbjct: 167 ---EQGNYDIIIQTTTIGMHPHVEYTPLQICSLKKGTIVSDIIYNPFETKILCEAKEQGA 223
Query: 481 TVVSGVEMFIRQ 492
+ +G++MF+ Q
Sbjct: 224 IIQNGIDMFVYQ 235
>gi|145577921|gb|ABP82679.1| shikimate 5-dehydrogenase [Bacillus weihenstephanensis]
Length = 238
Score = 135 bits (340), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 86/250 (34%), Positives = 131/250 (52%), Gaps = 22/250 (8%)
Query: 250 SKGPILHNPAFRHTRFNGIYVPMLVDD--VKEFFRTYSGTDFAGFSVGIPHKEPAVACCD 307
S P++HN AF H + Y LV++ + E + +GF+V PHK + D
Sbjct: 1 SLSPVMHNDAFEHLNMDAHYHAFLVEEEALGEAVKGLKALGISGFNVTTPHKAAIMEYLD 60
Query: 308 EVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALRERQGINGVASHTSPIAG 367
E+ PLA+ IGAVNT++ R DGKL+GYNTD + A++ + P+
Sbjct: 61 EIAPLARQIGAVNTVVHR--DGKLIGYNTDGIGFVRALQSISED------------PLQE 106
Query: 368 KIFVLVGAGGAGRALAFGAKSRGARVI-IFNRNYERAKALADA----VSGEALHFEYLHE 422
K +L+GAGGA RA+ F G + I I NR ++AK L V+ AL E E
Sbjct: 107 KRILLIGAGGASRAIYFSLADVGVKEIDIANRTRDKAKNLISGCMANVNSHALSLECAAE 166
Query: 423 FFPEKGMILANASAIGMEPNSDQSPVPKEALKAYELVFDAVYTPRNTRLLREAAEVGATV 482
E +I+ + IGM P+ + +P+ +LK +V D +Y P T++L +A E GA +
Sbjct: 167 NQGEYDIII-QTTTIGMHPHVEYTPLEIRSLKQGTIVSDIIYNPFETKILGDAKEQGAII 225
Query: 483 VSGVEMFIRQ 492
+G++MF+ Q
Sbjct: 226 QNGIDMFVYQ 235
>gi|29726767|pdb|1NVT|A Chain A, Crystal Structure Of Shikimate Dehydrogenase (Aroe Or
Mj1084) In Complex With Nadp+
gi|29726768|pdb|1NVT|B Chain B, Crystal Structure Of Shikimate Dehydrogenase (Aroe Or
Mj1084) In Complex With Nadp+
Length = 287
Score = 135 bits (340), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 105/296 (35%), Positives = 156/296 (52%), Gaps = 27/296 (9%)
Query: 233 INPDTKIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVP--MLVDDVKEFFRTYSGTDFA 290
IN TK+ GL+ +PV HS PI+HN AF+ N +YV +L +++K
Sbjct: 7 INAKTKVIGLIGHPVEHSFSPIMHNAAFKDKGLNYVYVAFDVLPENLKYVIDGAKALGIV 66
Query: 291 GFSVGIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALR 350
GF+V IPHK + DE+ A+ IGAVNTI + DGK +GYNTD A A+E+ +
Sbjct: 67 GFNVTIPHKIEIMKYLDEIDKDAQLIGAVNTI--KIEDGKAIGYNTDGIGARMALEEEI- 123
Query: 351 ERQGINGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGARVIIFNRNYERAKALADAV 410
+ K V+ GAGGA RA+AF ++ +II NR E+A+ALA +
Sbjct: 124 ------------GRVKDKNIVIYGAGGAARAVAFEL-AKDNNIIIANRTVEKAEALAKEI 170
Query: 411 S-------GEALHFEYLHEFFPEKGMILANASAIGMEPNSDQSPVPK-EALKAYELVFDA 462
+ GE + F L +I+ NA+ IGM PN D P+ K E L+ +V D
Sbjct: 171 AEKLNKKFGEEVKFSGLDVDLDGVDIII-NATPIGMYPNIDVEPIVKAEKLREDMVVMDL 229
Query: 463 VYTPRNTRLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRKLVLEQF 518
+Y P T LL+EA +V A ++G+ M I Q F+++TG + M+ ++++
Sbjct: 230 IYNPLETVLLKEAKKVNAKTINGLGMLIYQGAVAFKIWTGVEPNIEVMKNAIIDKI 285
>gi|295706669|ref|YP_003599744.1| shikimate 5-dehydrogenase [Bacillus megaterium DSM 319]
gi|294804328|gb|ADF41394.1| shikimate 5-dehydrogenase [Bacillus megaterium DSM 319]
Length = 279
Score = 135 bits (340), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 91/289 (31%), Positives = 152/289 (52%), Gaps = 27/289 (9%)
Query: 237 TKIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLVDDVKEFFRTYSG----TDFAGF 292
+ ++GLV P+GHS P++ N AF+ + Y ++ V F + G + GF
Sbjct: 2 STLYGLVGYPLGHSLSPLMQNDAFKRLNMDAHYEAFPIEPVH--FESAIGELKDKNIQGF 59
Query: 293 SVGIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALRER 352
+V IP+K + DEV PLAK+IGAVNT++++ DG+ +GYNTD E ++++ L+
Sbjct: 60 NVTIPYKVDIMKHLDEVDPLAKAIGAVNTVVKQ--DGRYIGYNTDGEGYVTSL---LKAV 114
Query: 353 QGINGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGAR--VIIFNRNYERAKALAD-- 408
+G ++ K +++GAGGA +A+ + ++ A + I NR E+A LA+
Sbjct: 115 EG---------SLSQKRILIIGAGGAAKAIFYTIAAQHAPEVIAICNRTVEKAAVLANEL 165
Query: 409 --AVSGEALHFEYLHEFFPEKGMILANASAIGMEPNSDQSPVPKEALKAYELVFDAVYTP 466
+ A+ + +I+ N +++GM PN D+ P+ L+ +V D +Y P
Sbjct: 166 PFSTKTAAMSISDAEKQLDTFDIII-NTTSVGMYPNVDELPLALTLLQKEAVVSDIIYNP 224
Query: 467 RNTRLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRKLVL 515
T+LL+EA GA +GV MF+ Q F +T E+ M +VL
Sbjct: 225 LKTKLLKEAEAKGAGTHNGVGMFVLQGALAFEKWTNVRPDEEAMEHIVL 273
>gi|145577937|gb|ABP82687.1| shikimate 5-dehydrogenase [Bacillus thuringiensis serovar bolivia]
gi|145577943|gb|ABP82690.1| shikimate 5-dehydrogenase [Bacillus weihenstephanensis]
Length = 238
Score = 135 bits (340), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 86/250 (34%), Positives = 131/250 (52%), Gaps = 22/250 (8%)
Query: 250 SKGPILHNPAFRHTRFNGIYVPMLVDD--VKEFFRTYSGTDFAGFSVGIPHKEPAVACCD 307
S P++HN AF H + Y LV++ + E + +GF+V PHK + D
Sbjct: 1 SLSPVMHNDAFEHLNMDAHYHAFLVEEEALGEAVKGLKALGISGFNVTTPHKVAIMEYLD 60
Query: 308 EVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALRERQGINGVASHTSPIAG 367
E+ PLA+ IGAVNT++ R DGKL+GYNTD + A++ + P+
Sbjct: 61 EIAPLARQIGAVNTVVHR--DGKLIGYNTDGIGFVRALQSISED------------PLQE 106
Query: 368 KIFVLVGAGGAGRALAFGAKSRGARVI-IFNRNYERAKALADA----VSGEALHFEYLHE 422
K +L+GAGGA RA+ F G + I I NR ++AK L V+ AL E E
Sbjct: 107 KRILLIGAGGASRAIYFSLADVGVKEIDIANRTRDKAKNLISGCMANVNSHALSLECAAE 166
Query: 423 FFPEKGMILANASAIGMEPNSDQSPVPKEALKAYELVFDAVYTPRNTRLLREAAEVGATV 482
E +I+ + IGM P+ + +P+ +LK +V D +Y P T++L +A E GA +
Sbjct: 167 NQGEYDIII-QTTTIGMHPHVEYTPLEIRSLKQGTIVSDIIYNPFETKILGDAKEQGAII 225
Query: 483 VSGVEMFIRQ 492
+G++MF+ Q
Sbjct: 226 QNGIDMFVYQ 235
>gi|398311509|ref|ZP_10514983.1| shikimate 5-dehydrogenase [Bacillus mojavensis RO-H-1]
Length = 278
Score = 135 bits (340), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 92/285 (32%), Positives = 144/285 (50%), Gaps = 22/285 (7%)
Query: 238 KIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLV--DDVKEFFRTYSGTDFAGFSVG 295
K++G++ NP+ HS P +HN A + +G Y V D +++ + G +V
Sbjct: 3 KLYGVIGNPIAHSMSPDIHNAALKDLGLDGHYHAFKVEEDSLEDAVKGIRALGLQGINVT 62
Query: 296 IPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALRERQGI 355
+PHK + D + AK +GAVNT+ RR D KLVGYNTD E + ++ L +
Sbjct: 63 VPHKVSIMDHLDHIDESAKVLGAVNTV-RREGD-KLVGYNTDGEGFVRSLMRILDK---- 116
Query: 356 NGVASHTSPIAGKIFVLVGAGGAGRAL-AFGAKSRGARVIIFNRNYERAKALADAVSG-- 412
PI+ F+++GAGGA RA+ + + I NR E+AK L D+
Sbjct: 117 --------PISELSFLMIGAGGAARAIFTTIVRDNPEKFDICNRTIEKAKQLTDSAPSFR 168
Query: 413 --EALHFEYLHEFFPEKGMILANASAIGMEPNSDQSPVPKEALKAYELVFDAVYTPRNTR 470
E L + E + +I+ + +++GM PN + P+ + + +V D VY P T
Sbjct: 169 NVEVLSIKEAEERLEQYDVII-HTTSVGMYPNVEDIPLSLQRAASSAVVCDIVYNPIQTS 227
Query: 471 LLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRKLVL 515
LL+EA + G + GV MF+ QA FRL+TG + MR +V+
Sbjct: 228 LLKEAKQKGLKTLDGVGMFVEQAALSFRLWTGHEPDVEKMRSIVV 272
>gi|291548176|emb|CBL21284.1| shikimate dehydrogenase [Ruminococcus sp. SR1/5]
Length = 288
Score = 135 bits (340), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 96/297 (32%), Positives = 150/297 (50%), Gaps = 31/297 (10%)
Query: 232 HINPDTKIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLVDD--VKEFFRTYSGTDF 289
+I T + GL+ +PV HS P++HN AFR+ + +Y+ V + + +
Sbjct: 3 NITGHTGLTGLLGSPVAHSVSPLMHNEAFRYLGLDYVYLCFDVTEETLPQAVEGLKACGI 62
Query: 290 AGFSVGIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDAL 349
GF++ +P+K V DE+ P A+ IGAVNT+ R +GKL G+NTD + DA
Sbjct: 63 KGFNLTMPNKNKIVELLDELSPTAQLIGAVNTV--RNDNGKLKGFNTDGYGFTQSARDA- 119
Query: 350 RERQGINGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGARVI-IF----NRNYERAK 404
+ G+ ++G GGAG A+ + GA+ I +F +R +ERA
Sbjct: 120 ------------GCDVKGRTITVMGVGGAGMAICGQSALEGAKKIHVFARPTSRYWERAA 167
Query: 405 ALADAVSGEALHFEYLHEFFP--------EKGMILANASAIGMEPNSDQSPVPKEALKAY 456
A+A+ +S LHE E+ +L NA+++GM P+ + + +AL
Sbjct: 168 AMAEKMSHMTECEMILHEMDDHTALKDALEESNLLINATSVGMVPDVTGTVISDKALFHP 227
Query: 457 EL-VFDAVYTPRNTRLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRK 512
EL V D VY PR TRLLREA E G +G+ M + Q + F ++TG P + +R+
Sbjct: 228 ELTVADVVYEPRETRLLREAREAGCPTFNGMYMLLHQGVKAFHIWTGLDMPVELVRE 284
>gi|225028702|ref|ZP_03717894.1| hypothetical protein EUBHAL_02981 [Eubacterium hallii DSM 3353]
gi|224954012|gb|EEG35221.1| shikimate dehydrogenase [Eubacterium hallii DSM 3353]
Length = 636
Score = 135 bits (340), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 92/294 (31%), Positives = 151/294 (51%), Gaps = 25/294 (8%)
Query: 234 NPDTKIFGLVSNPVGHS-KGPILHNPAFRHTRFNGIYVPMLVD--DVKEFFRTYSGTDFA 290
N ++ GL NPV + GP++ F N Y+ M V+ ++K+
Sbjct: 134 NYRAELVGLFGNPVDENPTGPMME-AGFAAQGLNYRYITMKVEKENLKDAIAGIRAIGMR 192
Query: 291 GFSVGIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALR 350
G ++ IPHK + DE+ P AK IGAVN+I R DG+L+G NTD + ++++ +
Sbjct: 193 GLNLTIPHKIAVIPFLDELSPAAKIIGAVNSI--RVQDGQLIGENTDGKGFVTSLMET-- 248
Query: 351 ERQGINGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGARVI-IFNRNYERAKALADA 409
GI + G+I ++G+GGA RA+A GA + I RN ER K LAD
Sbjct: 249 ---GI--------ELNGRIITVLGSGGAARAVAVECAISGAETVNIVARNEERGKELADL 297
Query: 410 VS----GEALHFEYLHEF-FPEKGMILANASAIGMEPNSDQSPVPKEALKAYELVFDAVY 464
+S + ++F + PE +L N + +G+ P+ ++ + E ++ V D V+
Sbjct: 298 ISEKTEAQGVYFTWKGSVPIPEGTEVLVNCTNVGLYPDENKPDITYEDIRKNMTVCDVVF 357
Query: 465 TPRNTRLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRKLVLEQF 518
P T+ L+EA GA V+G+ M + QA + L+T +AP+D M++ +L +F
Sbjct: 358 NPPETKFLKEAKARGAATVNGLGMLVNQAALNYCLWTENMAPKDMMKEALLREF 411
>gi|145577929|gb|ABP82683.1| shikimate 5-dehydrogenase [Bacillus thuringiensis serovar
pulsiensis]
Length = 238
Score = 135 bits (340), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 89/252 (35%), Positives = 130/252 (51%), Gaps = 26/252 (10%)
Query: 250 SKGPILHNPAFRHTRFNGIYVPMLVDD--VKEFFRTYSGTDFAGFSVGIPHKEPAVACCD 307
S P++HN AF H + Y LV + + E R +GF+V PHK + D
Sbjct: 1 SLSPVMHNDAFEHLNMDAHYHAFLVKEEVLGEAVRGLKALGISGFNVTTPHKVAIMDYLD 60
Query: 308 EVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALRERQGINGVASHTSPIAG 367
E+ PLAK IGAVNT++ + DGKL+GYNTD + A++ E P+
Sbjct: 61 EIDPLAKQIGAVNTVVHK--DGKLIGYNTDGIGFVRALQSISSE------------PLQE 106
Query: 368 KIFVLVGAGGAGRALAFGAKSRGARVI-IFNRNYERAKALADA----VSGEALHFEYLHE 422
K +L+GAGGA RA+ F G + I + NR ++AK L A V AL E +
Sbjct: 107 KRILLLGAGGASRAIYFSLADAGVKEIDVANRTVDKAKELIAACTATVHSVALSLE---K 163
Query: 423 FFPEKGM--ILANASAIGMEPNSDQSPVPKEALKAYELVFDAVYTPRNTRLLREAAEVGA 480
E+G I+ + IGM P + +P+ +LK +V D +Y P T++L EA E GA
Sbjct: 164 ATKEQGNYDIIIQTTTIGMHPRVEHTPLQISSLKNGTIVSDIIYNPFETKILCEAKEQGA 223
Query: 481 TVVSGVEMFIRQ 492
+ +G++MF+ Q
Sbjct: 224 IIQNGIDMFVYQ 235
>gi|448360171|ref|ZP_21548813.1| shikimate 5-dehydrogenase [Natrialba chahannaoensis JCM 10990]
gi|445640121|gb|ELY93211.1| shikimate 5-dehydrogenase [Natrialba chahannaoensis JCM 10990]
Length = 278
Score = 135 bits (340), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 111/294 (37%), Positives = 146/294 (49%), Gaps = 30/294 (10%)
Query: 238 KIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLVDDVKEFFRTYSGTD---FAGFSV 294
+FGL+ NPVGHS+ P +H A+ ++ YV D + +G D G +V
Sbjct: 2 NVFGLLGNPVGHSRSPPMHEAAYDELTYDARYV-TFEPDPSDLEAAVAGADALGITGLNV 60
Query: 295 GIPHKEPAVAC-CDEVHPLAKSIGAVNTIIRRP------IDGKLVGYNTDCESAISAIED 347
IP K+ + E LA IGAVNTI P G+ G+NTD A+ A
Sbjct: 61 TIPFKQDVLELDLVEADELATRIGAVNTIDFEPDSSRSNSSGRATGHNTDAAGALRA--- 117
Query: 348 ALRERQGINGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGARVIIFNRNYERAKALA 407
LRE H +AG V+VGAGGAGRA++F GA V I NR A LA
Sbjct: 118 -LRE---------HDVTVAGADAVVVGAGGAGRAISFALADAGATVAIANRTESTAHELA 167
Query: 408 DAV---SGEALHFEYLHEFFPEKGMILANASAIGMEPNSDQSPVPKEALKAYELVFDAVY 464
V +G L L + IL NA+++GME +D++PVP +AL V DAVY
Sbjct: 168 ADVPDATGHGLDEGVLESLLADAD-ILVNATSVGME--ADETPVPADALHGDLAVMDAVY 224
Query: 465 TPRNTRLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRKLVLEQF 518
P TRLLR+A + GAT V G M + Q + F L+TG AP D M + + Q
Sbjct: 225 QPLETRLLRDATDAGATTVDGAWMLLYQGVEAFELWTGREAPVDVMNEALRAQL 278
>gi|336255346|ref|YP_004598453.1| Shikimate dehydrogenase [Halopiger xanaduensis SH-6]
gi|335339335|gb|AEH38574.1| Shikimate dehydrogenase [Halopiger xanaduensis SH-6]
Length = 271
Score = 135 bits (339), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 111/281 (39%), Positives = 143/281 (50%), Gaps = 25/281 (8%)
Query: 238 KIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLVD--DVKEFFRTYSGTDFAGFSVG 295
+FGL+ NPVGHS P +H A+ + YV D D+++ + G +V
Sbjct: 4 DVFGLLGNPVGHSLSPPMHEAAYDELDIDARYVTFEPDPDDLEDAIEGAAALGVTGLNVT 63
Query: 296 IPHKEPAVACCDEVHPLAKSIGAVNTII---RRPIDGKLVGYNTDCESAISAIEDALRER 352
IP K+ A+A E LA IGAVNTI P G+NTD A+ A LRE+
Sbjct: 64 IPFKQDALAVV-EPDDLAARIGAVNTIDFTGDHP-----TGHNTDAGGALRA----LREQ 113
Query: 353 QGINGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGARVIIFNRNYERAKALADAV-S 411
+ T + V+VGAGGAGRA+AFG GA V I NR +A LAD V
Sbjct: 114 ------SDATLSLEDARAVVVGAGGAGRAIAFGLADAGATVDIANRTESKAHDLADEVPD 167
Query: 412 GEALHFEYLHEFFPEKGMILANASAIGMEPNSDQSPVPKEALKAYELVFDAVYTPRNTRL 471
E L E + +L NA+++GME D +PVP AL V DAVY P TRL
Sbjct: 168 ATGYGLENLEELLSDAD-VLVNATSVGME--EDATPVPANALHGELTVMDAVYRPLETRL 224
Query: 472 LREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRK 512
LR+AA+VGAT V G M + Q + F +TG AP D M +
Sbjct: 225 LRDAADVGATTVDGAWMLLYQGVEAFERWTGWDAPVDAMNE 265
>gi|145577957|gb|ABP82697.1| shikimate 5-dehydrogenase [Bacillus thuringiensis serovar
poloniensis]
Length = 238
Score = 135 bits (339), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 89/252 (35%), Positives = 129/252 (51%), Gaps = 26/252 (10%)
Query: 250 SKGPILHNPAFRHTRFNGIYVPMLVDD--VKEFFRTYSGTDFAGFSVGIPHKEPAVACCD 307
S P++HN AF H + Y LV + + E R +GF+V PHK + D
Sbjct: 1 SLSPVMHNDAFEHLNMDAHYHAFLVKEEVLGEAVRGLKALGISGFNVTTPHKVAIMDYLD 60
Query: 308 EVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALRERQGINGVASHTSPIAG 367
E+ PLAK IGAVNT++ + DGKL+GYNTD + A++ E P+
Sbjct: 61 EIDPLAKQIGAVNTVVHK--DGKLIGYNTDGIGFVRALQSISSE------------PLQE 106
Query: 368 KIFVLVGAGGAGRALAFGAKSRGARVI-IFNRNYERAKALADA----VSGEALHFEYLHE 422
K +L+GAGGA RA+ F G + I + NR ++AK L A V AL E E
Sbjct: 107 KRILLLGAGGASRAIYFSLADVGVKEIDVANRTVDKAKELITACKATVHSVALSLEKATE 166
Query: 423 FFPEKGM--ILANASAIGMEPNSDQSPVPKEALKAYELVFDAVYTPRNTRLLREAAEVGA 480
E+G I+ + IGM P + +P+ +L +V D +Y P T++L EA E GA
Sbjct: 167 ---EQGNYDIIIQTTTIGMHPRVEHTPLQISSLNKGTIVSDIIYNPFETKILCEAKEQGA 223
Query: 481 TVVSGVEMFIRQ 492
+ +G++MF+ Q
Sbjct: 224 MIQNGIDMFVYQ 235
>gi|114566075|ref|YP_753229.1| shikimate 5-dehydrogenase [Syntrophomonas wolfei subsp. wolfei str.
Goettingen]
gi|122318819|sp|Q0AZJ6.1|AROE_SYNWW RecName: Full=Shikimate dehydrogenase
gi|114337010|gb|ABI67858.1| shikimate dehydrogenase [Syntrophomonas wolfei subsp. wolfei str.
Goettingen]
Length = 290
Score = 135 bits (339), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 91/297 (30%), Positives = 150/297 (50%), Gaps = 35/297 (11%)
Query: 237 TKIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLVDDVK--EFFRTYSGTDFAGFSV 294
T++ GL+ P+ HS P++HN + N IY+ + +++ K E +F G +V
Sbjct: 7 TELMGLIGYPLQHSLSPLMHNLTLKKMGLNCIYLALEIEEGKLPEIPSAIRTLNFRGLNV 66
Query: 295 GIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALRERQG 354
IP+KE + DE+ P A + GAVN I + +G L GYNTD + +ALRE +G
Sbjct: 67 TIPYKEKIIPFLDELSPEAAAFGAVNVIKNK--NGHLHGYNTDGRGFV----EALRE-EG 119
Query: 355 INGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRG-ARVIIFNRNYERAKALADAVSGE 413
I+ G+ + +GAGGA R++AF G +R+ + ++ RA+ LA+ ++
Sbjct: 120 ID---------PGERALFIGAGGAARSVAFALAGLGVSRLDFLDLDFSRARQLAEFITSR 170
Query: 414 A-----------LHFEYLHEFFPEKGMILANASAIGMEPNSDQSPVPKEALKAYELVF-D 461
+ L F+ L I+ N S +GM P++ +SPV KE L+ V D
Sbjct: 171 SSSLASAFLMNTLEFQRLSR----TASIIINCSPVGMFPDTGKSPVSKEDLRGSRAVLCD 226
Query: 462 AVYTPRNTRLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRKLVLEQF 518
+Y P +R L E+G ++G+ MF++Q + G P D+M+++V Q
Sbjct: 227 LIYNPLQSRFLSLGQELGLETMNGLGMFVQQGALTLEILLGQKPPLDYMKEVVQNQL 283
>gi|297170988|gb|ADI22003.1| shikimate 5-dehydrogenase [uncultured myxobacterium HF0200_01L06]
Length = 274
Score = 135 bits (339), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 95/281 (33%), Positives = 142/281 (50%), Gaps = 24/281 (8%)
Query: 233 INPDTKIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLV--DDVKEFFRTYSGTDFA 290
I+ T + G++ +P GH++ P +HN AF + Y+ V DD++
Sbjct: 5 ISATTALCGILLHPAGHTRSPAMHNAAFEALGIDASYLAFDVHPDDLEAALSGARALGVR 64
Query: 291 GFSVGIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDG-KLVGYNTDCESAISAIEDAL 349
++ +PHK + DEV +A++IGAVNT+ DG + G NTD A+ A+E
Sbjct: 65 QLAISLPHKIAVLDHLDEVDSVAQAIGAVNTVT---FDGGRARGTNTDWLGAVEALE--- 118
Query: 350 RERQGINGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGARVIIFNRNYERAKALADA 409
RE +PIA + V++GAGG R++ +G RGA V + NR RA+ LA
Sbjct: 119 RE-----------APIAQQHAVVLGAGGTARSVVYGLLQRGATVSVLNRTEARAEELAAE 167
Query: 410 VSGEALHFEYLHEFFPEKGMILANASAIGMEPNSDQSPVPKEALKAYELVFDAVYTPRNT 469
+ + L +L N +++G+ SD+SPV L+ +V DAVY P T
Sbjct: 168 LGAQ--QAGPLASLKSTAYDLLVNTTSVGLR--SDRSPVAPSDLREQAVVLDAVYDPETT 223
Query: 470 RLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFM 510
RLLR+A GA V G M + QA Q R++TG AP + M
Sbjct: 224 RLLRDAQAAGAATVQGKWMLVYQAAEQLRIWTGKEAPLEIM 264
>gi|262181541|gb|ACY29661.1| 3-dehydroquinate dehydratase 01 [Vitis vinifera]
Length = 222
Score = 135 bits (339), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 81/212 (38%), Positives = 132/212 (62%), Gaps = 10/212 (4%)
Query: 5 AKNSLLVCTQLECETTEEMQASIEQAKVEGADLVELCIDSME-FSHISEVDKLIQHPTLP 63
+KNS L+C + ET E+M + +AK GADLVE+ +D+++ F+ +++ LI+ LP
Sbjct: 7 SKNSTLICVPIMGETIEKMVVDMSKAKTSGADLVEVRLDTLKRFNPRQDLEVLIRKCPLP 66
Query: 64 AIVSYRLKSSRKSSDEACKNTCLQVLRRALDLDVEFVEMDYEVASDPLMSEIIYSRS--N 121
+ +YR K E +N+ LR A++L ++V+++ +VA + + S I+ R
Sbjct: 67 TLFTYRPKW-EGGQYEGDENSRRDALRLAMELGADYVDIELKVAHEFINS--IHGRKPEK 123
Query: 122 TKIIVSSYLNGGGKPTTEKLGDVIACMQATGADVMKLEIAVDSITDLAPVFEMLTHCQ-- 179
K+IVSS+ N P+ E LG+++ +QATGAD++K+ ITD+A +F++ H Q
Sbjct: 124 FKVIVSSH-NYQNTPSVEDLGNLVVSIQATGADIVKIATTALEITDVARIFQITVHSQVS 182
Query: 180 -VPLIALAVGSRGLISQLLGPKFGGFLVYGSL 210
VP+I L +G RGLIS++L PKF G+L +GSL
Sbjct: 183 SVPVIGLVMGERGLISRILCPKFSGYLTFGSL 214
>gi|239905373|ref|YP_002952112.1| shikimate dehydrogenase [Desulfovibrio magneticus RS-1]
gi|239795237|dbj|BAH74226.1| shikimate dehydrogenase [Desulfovibrio magneticus RS-1]
Length = 274
Score = 135 bits (339), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 98/283 (34%), Positives = 143/283 (50%), Gaps = 24/283 (8%)
Query: 238 KIFGLVSNPVGHSKGPILHNPAFRHTRFNGIY--VPMLVDDVKEFFRTYSGTDFAGFSVG 295
++FG++ +P+GH+ P++HN F + Y P +D+ F T AG SV
Sbjct: 2 QLFGIIGHPLGHTLSPLVHNWGFSRYGLDARYEAWPTPPEDLPAFMERLRQTPIAGASVT 61
Query: 296 IPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISA-IEDALRERQG 354
IPHK +A DEV L ++ GAVNT+ R DG+LVG NTD E + + R+
Sbjct: 62 IPHKTAVMAFVDEVTDLGQAAGAVNTLYWR--DGRLVGDNTDVEGFCRPLVMRGIAPRRA 119
Query: 355 INGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGARVIIFNRNYERAKALADAVSGEA 414
+ A + A + +G G + R +E+A+ALA A
Sbjct: 120 LVLGAGGAARAAVLGLTRLDSGVVG---------------VTARRFEQAQALAREFGVLA 164
Query: 415 LHFEYLHEFFPEKGMILANASAIGMEPNSDQ-SPVPKEALKAYELVFDAVYTPRNTRLLR 473
+ ++ F + L NA+ +GM + SP P +AL + FD VY P TRL
Sbjct: 165 VPWDERGAFGAD---FLTNATPMGMAGRFEGVSPYPAQALAPGVVAFDLVYNPYETRLAA 221
Query: 474 EAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRKLVLE 516
+AA G TVV G+EMF+ QAL QFRL+TG L P+D +R L+L+
Sbjct: 222 DAAAAGGTVVPGLEMFLYQALEQFRLWTGRLLPDDELRSLLLK 264
>gi|69249504|ref|ZP_00604998.1| Quinate/Shikimate 5-dehydrogenase [Enterococcus faecium DO]
gi|257878246|ref|ZP_05657899.1| quinate/shikimate 5-dehydrogenase [Enterococcus faecium 1,230,933]
gi|257880974|ref|ZP_05660627.1| quinate/shikimate 5-dehydrogenase [Enterococcus faecium 1,231,502]
gi|257889556|ref|ZP_05669209.1| quinate/shikimate 5-dehydrogenase [Enterococcus faecium 1,231,410]
gi|257892504|ref|ZP_05672157.1| quinate/shikimate 5-dehydrogenase [Enterococcus faecium 1,231,408]
gi|260559796|ref|ZP_05831975.1| quinate/Shikimate 5-dehydrogenase [Enterococcus faecium C68]
gi|261207823|ref|ZP_05922508.1| quinate/Shikimate 5-dehydrogenase [Enterococcus faecium TC 6]
gi|289566376|ref|ZP_06446804.1| shikimate 5-dehydrogenase [Enterococcus faecium D344SRF]
gi|293560591|ref|ZP_06677079.1| shikimate 5-dehydrogenase [Enterococcus faecium E1162]
gi|293569865|ref|ZP_06680952.1| shikimate 5-dehydrogenase [Enterococcus faecium E1071]
gi|294621710|ref|ZP_06700874.1| shikimate 5-dehydrogenase [Enterococcus faecium U0317]
gi|314937722|ref|ZP_07845045.1| shikimate 5-dehydrogenase [Enterococcus faecium TX0133a04]
gi|314942645|ref|ZP_07849473.1| shikimate 5-dehydrogenase [Enterococcus faecium TX0133C]
gi|314948840|ref|ZP_07852211.1| shikimate 5-dehydrogenase [Enterococcus faecium TX0082]
gi|314950852|ref|ZP_07853922.1| shikimate 5-dehydrogenase [Enterococcus faecium TX0133A]
gi|314992913|ref|ZP_07858311.1| shikimate 5-dehydrogenase [Enterococcus faecium TX0133B]
gi|314995671|ref|ZP_07860762.1| shikimate 5-dehydrogenase [Enterococcus faecium TX0133a01]
gi|383328271|ref|YP_005354155.1| shikimate 5-dehydrogenase [Enterococcus faecium Aus0004]
gi|389868552|ref|YP_006375975.1| shikimate dehydrogenase [Enterococcus faecium DO]
gi|406581268|ref|ZP_11056426.1| shikimate 5-dehydrogenase [Enterococcus sp. GMD4E]
gi|406583572|ref|ZP_11058628.1| shikimate 5-dehydrogenase [Enterococcus sp. GMD3E]
gi|406585881|ref|ZP_11060835.1| shikimate 5-dehydrogenase [Enterococcus sp. GMD2E]
gi|406591382|ref|ZP_11065666.1| shikimate 5-dehydrogenase [Enterococcus sp. GMD1E]
gi|410937496|ref|ZP_11369356.1| shikimate dehydrogenase [Enterococcus sp. GMD5E]
gi|415891282|ref|ZP_11549686.1| shikimate 5-dehydrogenase [Enterococcus faecium E4453]
gi|416142973|ref|ZP_11599688.1| shikimate 5-dehydrogenase [Enterococcus faecium E4452]
gi|424790457|ref|ZP_18217001.1| shikimate dehydrogenase [Enterococcus faecium V689]
gi|424795666|ref|ZP_18221490.1| shikimate dehydrogenase [Enterococcus faecium S447]
gi|424819259|ref|ZP_18244382.1| shikimate dehydrogenase [Enterococcus faecium R501]
gi|424857325|ref|ZP_18281485.1| shikimate dehydrogenase [Enterococcus faecium R499]
gi|424864847|ref|ZP_18288746.1| shikimate dehydrogenase [Enterococcus faecium R497]
gi|424950425|ref|ZP_18365589.1| shikimate dehydrogenase [Enterococcus faecium R496]
gi|424953710|ref|ZP_18368654.1| shikimate dehydrogenase [Enterococcus faecium R494]
gi|424956712|ref|ZP_18371476.1| shikimate dehydrogenase [Enterococcus faecium R446]
gi|424959170|ref|ZP_18373771.1| shikimate dehydrogenase [Enterococcus faecium P1986]
gi|424963383|ref|ZP_18377611.1| shikimate dehydrogenase [Enterococcus faecium P1190]
gi|424969022|ref|ZP_18382613.1| shikimate dehydrogenase [Enterococcus faecium P1140]
gi|424969603|ref|ZP_18383161.1| shikimate dehydrogenase [Enterococcus faecium P1139]
gi|424973123|ref|ZP_18386414.1| shikimate dehydrogenase [Enterococcus faecium P1137]
gi|424976239|ref|ZP_18389343.1| shikimate dehydrogenase [Enterococcus faecium P1123]
gi|424980094|ref|ZP_18392912.1| shikimate dehydrogenase [Enterococcus faecium ERV99]
gi|424984020|ref|ZP_18396574.1| shikimate dehydrogenase [Enterococcus faecium ERV69]
gi|424987351|ref|ZP_18399729.1| shikimate dehydrogenase [Enterococcus faecium ERV38]
gi|424990468|ref|ZP_18402680.1| shikimate dehydrogenase [Enterococcus faecium ERV26]
gi|424993800|ref|ZP_18405775.1| shikimate dehydrogenase [Enterococcus faecium ERV168]
gi|424997154|ref|ZP_18408921.1| shikimate dehydrogenase [Enterococcus faecium ERV165]
gi|425000132|ref|ZP_18411713.1| shikimate dehydrogenase [Enterococcus faecium ERV161]
gi|425004114|ref|ZP_18415443.1| shikimate dehydrogenase [Enterococcus faecium ERV102]
gi|425006313|ref|ZP_18417493.1| shikimate dehydrogenase [Enterococcus faecium ERV1]
gi|425009912|ref|ZP_18420895.1| shikimate dehydrogenase [Enterococcus faecium E422]
gi|425014063|ref|ZP_18424759.1| shikimate dehydrogenase [Enterococcus faecium E417]
gi|425016425|ref|ZP_18426989.1| shikimate dehydrogenase [Enterococcus faecium C621]
gi|425019992|ref|ZP_18430322.1| shikimate dehydrogenase [Enterococcus faecium C497]
gi|425024056|ref|ZP_18434145.1| shikimate dehydrogenase [Enterococcus faecium C1904]
gi|425031046|ref|ZP_18436191.1| shikimate dehydrogenase [Enterococcus faecium 515]
gi|425034089|ref|ZP_18439001.1| shikimate dehydrogenase [Enterococcus faecium 514]
gi|425038010|ref|ZP_18442643.1| shikimate dehydrogenase [Enterococcus faecium 513]
gi|425040819|ref|ZP_18445261.1| shikimate dehydrogenase [Enterococcus faecium 511]
gi|425044491|ref|ZP_18448650.1| shikimate dehydrogenase [Enterococcus faecium 510]
gi|425049209|ref|ZP_18453074.1| shikimate dehydrogenase [Enterococcus faecium 509]
gi|425051105|ref|ZP_18454787.1| shikimate dehydrogenase [Enterococcus faecium 506]
gi|425062417|ref|ZP_18465577.1| shikimate dehydrogenase [Enterococcus faecium 503]
gi|427394923|ref|ZP_18887845.1| shikimate 5-dehydrogenase [Enterococcus durans FB129-CNAB-4]
gi|430825333|ref|ZP_19443538.1| shikimate 5-dehydrogenase [Enterococcus faecium E0164]
gi|430828586|ref|ZP_19446706.1| shikimate 5-dehydrogenase [Enterococcus faecium E0269]
gi|430830533|ref|ZP_19448591.1| shikimate 5-dehydrogenase [Enterococcus faecium E0333]
gi|430844277|ref|ZP_19462175.1| shikimate 5-dehydrogenase [Enterococcus faecium E1050]
gi|430846256|ref|ZP_19464116.1| shikimate 5-dehydrogenase [Enterococcus faecium E1133]
gi|430854634|ref|ZP_19472347.1| shikimate 5-dehydrogenase [Enterococcus faecium E1392]
gi|430862200|ref|ZP_19479552.1| shikimate 5-dehydrogenase [Enterococcus faecium E1573]
gi|430870903|ref|ZP_19483490.1| shikimate 5-dehydrogenase [Enterococcus faecium E1575]
gi|430959924|ref|ZP_19487059.1| shikimate 5-dehydrogenase [Enterococcus faecium E1576]
gi|431008916|ref|ZP_19489356.1| shikimate 5-dehydrogenase [Enterococcus faecium E1578]
gi|431195518|ref|ZP_19500496.1| shikimate 5-dehydrogenase [Enterococcus faecium E1620]
gi|431228613|ref|ZP_19501754.1| shikimate 5-dehydrogenase [Enterococcus faecium E1622]
gi|431258926|ref|ZP_19505103.1| shikimate 5-dehydrogenase [Enterococcus faecium E1623]
gi|431540493|ref|ZP_19517950.1| shikimate 5-dehydrogenase [Enterococcus faecium E1731]
gi|431745997|ref|ZP_19534833.1| shikimate 5-dehydrogenase [Enterococcus faecium E2134]
gi|431748492|ref|ZP_19537250.1| shikimate 5-dehydrogenase [Enterococcus faecium E2297]
gi|431754638|ref|ZP_19543299.1| shikimate 5-dehydrogenase [Enterococcus faecium E2883]
gi|431765421|ref|ZP_19553935.1| shikimate 5-dehydrogenase [Enterococcus faecium E4215]
gi|431770633|ref|ZP_19559032.1| shikimate 5-dehydrogenase [Enterococcus faecium E1644]
gi|431773158|ref|ZP_19561490.1| shikimate 5-dehydrogenase [Enterococcus faecium E2369]
gi|431775980|ref|ZP_19564249.1| shikimate 5-dehydrogenase [Enterococcus faecium E2560]
gi|431778556|ref|ZP_19566766.1| shikimate 5-dehydrogenase [Enterococcus faecium E4389]
gi|431782083|ref|ZP_19570221.1| shikimate 5-dehydrogenase [Enterococcus faecium E6012]
gi|431785527|ref|ZP_19573552.1| shikimate 5-dehydrogenase [Enterococcus faecium E6045]
gi|447913136|ref|YP_007394548.1| Shikimate, quinate 5-dehydrogenase I beta [Enterococcus faecium
NRRL B-2354]
gi|68194130|gb|EAN08666.1| Quinate/Shikimate 5-dehydrogenase [Enterococcus faecium DO]
gi|257812474|gb|EEV41232.1| quinate/shikimate 5-dehydrogenase [Enterococcus faecium 1,230,933]
gi|257816632|gb|EEV43960.1| quinate/shikimate 5-dehydrogenase [Enterococcus faecium 1,231,502]
gi|257825916|gb|EEV52542.1| quinate/shikimate 5-dehydrogenase [Enterococcus faecium 1,231,410]
gi|257828883|gb|EEV55490.1| quinate/shikimate 5-dehydrogenase [Enterococcus faecium 1,231,408]
gi|260074020|gb|EEW62343.1| quinate/Shikimate 5-dehydrogenase [Enterococcus faecium C68]
gi|260078206|gb|EEW65912.1| quinate/Shikimate 5-dehydrogenase [Enterococcus faecium TC 6]
gi|289161814|gb|EFD09686.1| shikimate 5-dehydrogenase [Enterococcus faecium D344SRF]
gi|291587613|gb|EFF19490.1| shikimate 5-dehydrogenase [Enterococcus faecium E1071]
gi|291598719|gb|EFF29772.1| shikimate 5-dehydrogenase [Enterococcus faecium U0317]
gi|291605414|gb|EFF34860.1| shikimate 5-dehydrogenase [Enterococcus faecium E1162]
gi|313590144|gb|EFR68989.1| shikimate 5-dehydrogenase [Enterococcus faecium TX0133a01]
gi|313592556|gb|EFR71401.1| shikimate 5-dehydrogenase [Enterococcus faecium TX0133B]
gi|313596985|gb|EFR75830.1| shikimate 5-dehydrogenase [Enterococcus faecium TX0133A]
gi|313598582|gb|EFR77427.1| shikimate 5-dehydrogenase [Enterococcus faecium TX0133C]
gi|313642925|gb|EFS07505.1| shikimate 5-dehydrogenase [Enterococcus faecium TX0133a04]
gi|313644783|gb|EFS09363.1| shikimate 5-dehydrogenase [Enterococcus faecium TX0082]
gi|364089488|gb|EHM32174.1| shikimate 5-dehydrogenase [Enterococcus faecium E4452]
gi|364094077|gb|EHM36288.1| shikimate 5-dehydrogenase [Enterococcus faecium E4453]
gi|378937965|gb|AFC63037.1| shikimate 5-dehydrogenase [Enterococcus faecium Aus0004]
gi|388533801|gb|AFK58993.1| shikimate dehydrogenase [Enterococcus faecium DO]
gi|402920798|gb|EJX41286.1| shikimate dehydrogenase [Enterococcus faecium V689]
gi|402924110|gb|EJX44343.1| shikimate dehydrogenase [Enterococcus faecium S447]
gi|402926323|gb|EJX46367.1| shikimate dehydrogenase [Enterococcus faecium R501]
gi|402929074|gb|EJX48868.1| shikimate dehydrogenase [Enterococcus faecium R499]
gi|402933157|gb|EJX52612.1| shikimate dehydrogenase [Enterococcus faecium R496]
gi|402938462|gb|EJX57471.1| shikimate dehydrogenase [Enterococcus faecium R494]
gi|402939866|gb|EJX58747.1| shikimate dehydrogenase [Enterococcus faecium R497]
gi|402945304|gb|EJX63662.1| shikimate dehydrogenase [Enterococcus faecium R446]
gi|402949532|gb|EJX67586.1| shikimate dehydrogenase [Enterococcus faecium P1190]
gi|402949997|gb|EJX68022.1| shikimate dehydrogenase [Enterococcus faecium P1140]
gi|402951232|gb|EJX69181.1| shikimate dehydrogenase [Enterococcus faecium P1986]
gi|402959301|gb|EJX76568.1| shikimate dehydrogenase [Enterococcus faecium P1137]
gi|402963746|gb|EJX80595.1| shikimate dehydrogenase [Enterococcus faecium P1139]
gi|402967447|gb|EJX83999.1| shikimate dehydrogenase [Enterococcus faecium ERV99]
gi|402969940|gb|EJX86316.1| shikimate dehydrogenase [Enterococcus faecium ERV69]
gi|402970247|gb|EJX86605.1| shikimate dehydrogenase [Enterococcus faecium P1123]
gi|402974689|gb|EJX90713.1| shikimate dehydrogenase [Enterococcus faecium ERV38]
gi|402979659|gb|EJX95321.1| shikimate dehydrogenase [Enterococcus faecium ERV26]
gi|402981658|gb|EJX97173.1| shikimate dehydrogenase [Enterococcus faecium ERV168]
gi|402986775|gb|EJY01884.1| shikimate dehydrogenase [Enterococcus faecium ERV165]
gi|402989906|gb|EJY04808.1| shikimate dehydrogenase [Enterococcus faecium ERV161]
gi|402990517|gb|EJY05387.1| shikimate dehydrogenase [Enterococcus faecium ERV102]
gi|402997497|gb|EJY11816.1| shikimate dehydrogenase [Enterococcus faecium ERV1]
gi|402999714|gb|EJY13891.1| shikimate dehydrogenase [Enterococcus faecium E417]
gi|403001557|gb|EJY15603.1| shikimate dehydrogenase [Enterococcus faecium E422]
gi|403007094|gb|EJY20689.1| shikimate dehydrogenase [Enterococcus faecium C621]
gi|403008172|gb|EJY21700.1| shikimate dehydrogenase [Enterococcus faecium C1904]
gi|403010421|gb|EJY23803.1| shikimate dehydrogenase [Enterococcus faecium C497]
gi|403016457|gb|EJY29275.1| shikimate dehydrogenase [Enterococcus faecium 515]
gi|403020368|gb|EJY32910.1| shikimate dehydrogenase [Enterococcus faecium 513]
gi|403021388|gb|EJY33853.1| shikimate dehydrogenase [Enterococcus faecium 514]
gi|403027677|gb|EJY39552.1| shikimate dehydrogenase [Enterococcus faecium 511]
gi|403028708|gb|EJY40517.1| shikimate dehydrogenase [Enterococcus faecium 509]
gi|403029808|gb|EJY41540.1| shikimate dehydrogenase [Enterococcus faecium 510]
gi|403038452|gb|EJY49667.1| shikimate dehydrogenase [Enterococcus faecium 503]
gi|403038554|gb|EJY49765.1| shikimate dehydrogenase [Enterococcus faecium 506]
gi|404452798|gb|EJZ99949.1| shikimate 5-dehydrogenase [Enterococcus sp. GMD4E]
gi|404456367|gb|EKA03090.1| shikimate 5-dehydrogenase [Enterococcus sp. GMD3E]
gi|404461989|gb|EKA07837.1| shikimate 5-dehydrogenase [Enterococcus sp. GMD2E]
gi|404467858|gb|EKA12918.1| shikimate 5-dehydrogenase [Enterococcus sp. GMD1E]
gi|410734109|gb|EKQ76030.1| shikimate dehydrogenase [Enterococcus sp. GMD5E]
gi|425724059|gb|EKU86943.1| shikimate 5-dehydrogenase [Enterococcus durans FB129-CNAB-4]
gi|430446226|gb|ELA55911.1| shikimate 5-dehydrogenase [Enterococcus faecium E0164]
gi|430483135|gb|ELA60234.1| shikimate 5-dehydrogenase [Enterococcus faecium E0333]
gi|430483419|gb|ELA60497.1| shikimate 5-dehydrogenase [Enterococcus faecium E0269]
gi|430496867|gb|ELA72926.1| shikimate 5-dehydrogenase [Enterococcus faecium E1050]
gi|430539050|gb|ELA79312.1| shikimate 5-dehydrogenase [Enterococcus faecium E1133]
gi|430548293|gb|ELA88198.1| shikimate 5-dehydrogenase [Enterococcus faecium E1392]
gi|430549491|gb|ELA89323.1| shikimate 5-dehydrogenase [Enterococcus faecium E1573]
gi|430556408|gb|ELA95916.1| shikimate 5-dehydrogenase [Enterococcus faecium E1576]
gi|430558702|gb|ELA98113.1| shikimate 5-dehydrogenase [Enterococcus faecium E1575]
gi|430560831|gb|ELB00123.1| shikimate 5-dehydrogenase [Enterococcus faecium E1578]
gi|430571896|gb|ELB10770.1| shikimate 5-dehydrogenase [Enterococcus faecium E1620]
gi|430574915|gb|ELB13678.1| shikimate 5-dehydrogenase [Enterococcus faecium E1622]
gi|430577021|gb|ELB15626.1| shikimate 5-dehydrogenase [Enterococcus faecium E1623]
gi|430593687|gb|ELB31669.1| shikimate 5-dehydrogenase [Enterococcus faecium E1731]
gi|430609424|gb|ELB46618.1| shikimate 5-dehydrogenase [Enterococcus faecium E2134]
gi|430613695|gb|ELB50698.1| shikimate 5-dehydrogenase [Enterococcus faecium E2297]
gi|430619232|gb|ELB56060.1| shikimate 5-dehydrogenase [Enterococcus faecium E2883]
gi|430628508|gb|ELB64943.1| shikimate 5-dehydrogenase [Enterococcus faecium E4215]
gi|430634900|gb|ELB71006.1| shikimate 5-dehydrogenase [Enterococcus faecium E1644]
gi|430637123|gb|ELB73161.1| shikimate 5-dehydrogenase [Enterococcus faecium E2369]
gi|430642095|gb|ELB77878.1| shikimate 5-dehydrogenase [Enterococcus faecium E2560]
gi|430643629|gb|ELB79348.1| shikimate 5-dehydrogenase [Enterococcus faecium E4389]
gi|430647496|gb|ELB82942.1| shikimate 5-dehydrogenase [Enterococcus faecium E6045]
gi|430648098|gb|ELB83521.1| shikimate 5-dehydrogenase [Enterococcus faecium E6012]
gi|445188845|gb|AGE30487.1| Shikimate, quinate 5-dehydrogenase I beta [Enterococcus faecium
NRRL B-2354]
Length = 284
Score = 135 bits (339), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 97/299 (32%), Positives = 151/299 (50%), Gaps = 36/299 (12%)
Query: 233 INPDTKIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYV-----PMLVDDVKEFFRTYSGT 287
I+ TK+ GL ++P HS P++HN AF + +Y+ PM + E RT+
Sbjct: 2 ISGQTKLAGLFADPASHSLSPLMHNTAFEANNIDAVYLAFQVNPMNLKQAVESIRTF--- 58
Query: 288 DFAGFSVGIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIED 347
D G ++ +P+K + DEV A+ IGAVNTI+ G+L+GYNTD + ++++
Sbjct: 59 DMLGVNLSMPNKTAVIPYLDEVSQEAQLIGAVNTIVHEK--GRLIGYNTDGAGFMQSVQE 116
Query: 348 ALRERQGINGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGAR-VIIFNRN---YERA 403
A GI+ I K L+GAGGA +A+ A GA ++++ RN + +
Sbjct: 117 A-----GIS--------IKKKKMTLLGAGGAAKAVTVQAALDGAEEIVVYKRNNQTFAQV 163
Query: 404 KALADAVSG------EALHFEYLHEFFPE--KGMILANASAIGMEPNSDQSPVPKEALKA 455
K + +S + F H+ + + +L NA+ IGM +QSP+ ++
Sbjct: 164 KETFEQLSYRTSCKIKVRDFADTHQLRKDLKESCLLVNATDIGMGKKINQSPLLDISMMH 223
Query: 456 YEL-VFDAVYTPRNTRLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRKL 513
L VFD +Y PR TRLL+EA +VGA +G+ M I Q F L+T P + KL
Sbjct: 224 ENLAVFDLIYAPRETRLLKEAKKVGAKGYNGLGMLIYQGAIAFELWTKEKMPIHVIEKL 282
>gi|435850486|ref|YP_007312072.1| shikimate 5-dehydrogenase [Methanomethylovorans hollandica DSM
15978]
gi|433661116|gb|AGB48542.1| shikimate 5-dehydrogenase [Methanomethylovorans hollandica DSM
15978]
Length = 273
Score = 135 bits (339), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 100/284 (35%), Positives = 145/284 (51%), Gaps = 24/284 (8%)
Query: 238 KIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLV--DDVKEFFRTYSGTDFAGFSVG 295
KIF + +P+ HS P++HN AF+ + Y V + +K+ + F G ++
Sbjct: 3 KIFAVFGDPIEHSLSPVMHNAAFKAKGMDCTYHAFRVSREKLKDAIKGAHAMGFGGLNLT 62
Query: 296 IPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALRERQGI 355
+P KE A+ E LA +GAVNT+ + DG + GYNTD A A+ DA
Sbjct: 63 VPLKEEALKIV-EPDLLAAVMGAVNTVDLK--DG-IRGYNTDGIGAERALVDA------- 111
Query: 356 NGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGARVIIFNRNYERAKALAD--AVSG- 412
GV I G ++VGAGGA R ++F S GA V I NR ERA LA+ AV+G
Sbjct: 112 -GV-----KIEGAKVLIVGAGGAARGISFQLASDGADVTIANRTPERAMRLAEDVAVAGN 165
Query: 413 -EALHFEYLHEFFPEKGMILANASAIGMEPNSDQSPVPKEALKAYELVFDAVYTPRNTRL 471
+ E L + +L N + +GM P + + E + A +VFD VY P T+L
Sbjct: 166 VKGCGLEQLDDLIASAD-VLINCTTLGMHPQVETTIATAEQMHAGLVVFDIVYNPLKTKL 224
Query: 472 LREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRKLVL 515
L EA + G+ VSGV M + Q FR++TG P + M++ V+
Sbjct: 225 LMEAEKAGSKTVSGVMMLVYQGAEAFRIWTGVEPPVEVMKEAVM 268
>gi|261405559|ref|YP_003241800.1| shikimate 5-dehydrogenase [Paenibacillus sp. Y412MC10]
gi|261282022|gb|ACX63993.1| shikimate 5-dehydrogenase [Paenibacillus sp. Y412MC10]
Length = 288
Score = 135 bits (339), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 93/296 (31%), Positives = 143/296 (48%), Gaps = 24/296 (8%)
Query: 233 INP----DTKIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLV--DDVKEFFRTYSG 286
+NP D + G++ +P+GHSK P +H+ A +G YVP+ + + + +
Sbjct: 3 VNPMNERDYLLLGVMGDPIGHSKSPAMHDAAINALGLSGAYVPLHIRPQGLGDAIQAVKV 62
Query: 287 TDFAGFSVGIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIE 346
F G +V IPHK + D V A+ IGAVNTI+ +GKL GYNTD + +++
Sbjct: 63 LGFRGVNVTIPHKVEVMKYLDVVDEGAQRIGAVNTIVND--NGKLTGYNTDGIGYVRSLK 120
Query: 347 DALRERQGINGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGA-RVIIFNRNYERAKA 405
D + GK V++GAGGA R + + G ++ I NR +A A
Sbjct: 121 D------------EACPDLKGKRIVVIGAGGAARGIIYALIGEGPEKISIVNRTSAKALA 168
Query: 406 LADAVSGEALHFEYLHEFFPE---KGMILANASAIGMEPNSDQSPVPKEALKAYELVFDA 462
LA+ A Y E E ++ N +++GM P + P+P E+++ +V D
Sbjct: 169 LAEEWGSLADLRGYGEEQAGEALSDADVIINTTSVGMFPRVSELPIPPESIREGIVVSDL 228
Query: 463 VYTPRNTRLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRKLVLEQF 518
+Y P T LLR+ T+ G+ MFI Q F +TG AP M++ VL F
Sbjct: 229 IYNPLKTELLRQGELRRCTIHGGLGMFINQGAYAFEYWTGLTAPVQAMKEAVLTSF 284
>gi|293553506|ref|ZP_06674134.1| shikimate 5-dehydrogenase [Enterococcus faecium E1039]
gi|430833289|ref|ZP_19451302.1| shikimate 5-dehydrogenase [Enterococcus faecium E0679]
gi|430835984|ref|ZP_19453969.1| shikimate 5-dehydrogenase [Enterococcus faecium E0680]
gi|431295209|ref|ZP_19507097.1| shikimate 5-dehydrogenase [Enterococcus faecium E1626]
gi|431767006|ref|ZP_19555466.1| shikimate 5-dehydrogenase [Enterococcus faecium E1321]
gi|291602383|gb|EFF32607.1| shikimate 5-dehydrogenase [Enterococcus faecium E1039]
gi|430486744|gb|ELA63580.1| shikimate 5-dehydrogenase [Enterococcus faecium E0679]
gi|430488824|gb|ELA65472.1| shikimate 5-dehydrogenase [Enterococcus faecium E0680]
gi|430581299|gb|ELB19744.1| shikimate 5-dehydrogenase [Enterococcus faecium E1626]
gi|430631879|gb|ELB68179.1| shikimate 5-dehydrogenase [Enterococcus faecium E1321]
Length = 284
Score = 135 bits (339), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 97/299 (32%), Positives = 151/299 (50%), Gaps = 36/299 (12%)
Query: 233 INPDTKIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYV-----PMLVDDVKEFFRTYSGT 287
I+ TK+ GL ++P HS P++HN AF + +Y+ PM + E RT+
Sbjct: 2 ISGQTKLAGLFADPASHSLSPLMHNTAFEANNIDAVYLAFKVNPMNLKQAVESIRTF--- 58
Query: 288 DFAGFSVGIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIED 347
D G ++ +P+K + DEV A+ IGAVNTI+ G+L+GYNTD + ++++
Sbjct: 59 DMLGVNLSMPNKTAVIPYLDEVSQEAQLIGAVNTIVHEK--GRLIGYNTDGAGFMQSVQE 116
Query: 348 ALRERQGINGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGAR-VIIFNRN---YERA 403
A GI+ I K L+GAGGA +A+ A GA ++++ RN + +
Sbjct: 117 A-----GIS--------IKKKKMTLLGAGGAAKAVTVQAALDGAEEIVVYKRNNQTFAQV 163
Query: 404 KALADAVSG------EALHFEYLHEFFPE--KGMILANASAIGMEPNSDQSPVPKEALKA 455
K + +S + F H+ + + +L NA+ IGM +QSP+ ++
Sbjct: 164 KETFEQLSYRTSCKIKVRDFADTHQLRKDLKESCLLVNATDIGMGKKINQSPLLDISMMH 223
Query: 456 YEL-VFDAVYTPRNTRLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRKL 513
L VFD +Y PR TRLL+EA +VGA +G+ M I Q F L+T P + KL
Sbjct: 224 ENLAVFDLIYAPRETRLLKEAKKVGAKGYNGLGMLIYQGAIAFELWTKEKMPIHVIEKL 282
>gi|431429706|ref|ZP_19512808.1| shikimate 5-dehydrogenase [Enterococcus faecium E1630]
gi|431759137|ref|ZP_19547752.1| shikimate 5-dehydrogenase [Enterococcus faecium E3346]
gi|430587940|gb|ELB26151.1| shikimate 5-dehydrogenase [Enterococcus faecium E1630]
gi|430626334|gb|ELB62910.1| shikimate 5-dehydrogenase [Enterococcus faecium E3346]
Length = 284
Score = 135 bits (339), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 97/299 (32%), Positives = 150/299 (50%), Gaps = 36/299 (12%)
Query: 233 INPDTKIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYV-----PMLVDDVKEFFRTYSGT 287
I+ TK+ GL ++P HS P++HN AF + +Y+ PM + E RTY
Sbjct: 2 ISGKTKLAGLFADPASHSLSPLMHNTAFEANNIDAVYLAFKVNPMNLKQAVESIRTY--- 58
Query: 288 DFAGFSVGIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIED 347
D G ++ +P+K + DEV A+ IGAVNTI+ G+L+GYNTD + ++++
Sbjct: 59 DMLGVNLSMPNKTAVIPYLDEVSQEAQLIGAVNTIVHEK--GRLIGYNTDGAGFMPSVQE 116
Query: 348 ALRERQGINGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGAR-VIIFNRN---YERA 403
A GI+ + K L+GAGGA +A+ A GA+ ++++ RN + +
Sbjct: 117 A-----GIS--------VKKKKMTLLGAGGAAKAVTVQAALDGAKEIVVYKRNNQTFAQV 163
Query: 404 KALADAVSGEALHFEYLHEFFP--------EKGMILANASAIGMEPNSDQSPVPKEALKA 455
K + +S + +F ++ +L NA+ IGM DQSP+ +
Sbjct: 164 KETFEQLSYRTSCKIKVRDFADTDQLRKDLKESCLLVNATDIGMGKKIDQSPLLDINMMH 223
Query: 456 YEL-VFDAVYTPRNTRLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRKL 513
L VFD +Y PR TRLL+EA +VGA +G+ M I Q F L+T P + KL
Sbjct: 224 ENLAVFDLIYAPRETRLLKEAKKVGAKGYNGLGMLIYQGAIAFELWTKEKMPIHVIEKL 282
>gi|257898584|ref|ZP_05678237.1| quinate/shikimate 5-dehydrogenase [Enterococcus faecium Com15]
gi|257836496|gb|EEV61570.1| quinate/shikimate 5-dehydrogenase [Enterococcus faecium Com15]
Length = 284
Score = 134 bits (338), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 96/299 (32%), Positives = 151/299 (50%), Gaps = 36/299 (12%)
Query: 233 INPDTKIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYV-----PMLVDDVKEFFRTYSGT 287
I+ TK+ GL ++P HS P++HN AF + +Y+ PM + E RT+
Sbjct: 2 ISGKTKLAGLFADPASHSLSPLMHNTAFEANNIDAVYLAFKVNPMNLKQAVESIRTF--- 58
Query: 288 DFAGFSVGIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIED 347
D G ++ +P+K + DEV A+ IGAVNTI+ G+L+GYNTD + ++++
Sbjct: 59 DMLGVNLSMPNKTAVIPYLDEVSQEAQLIGAVNTIVHEK--GRLIGYNTDGAGFMQSVQE 116
Query: 348 ALRERQGINGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGAR-VIIFNRN---YERA 403
A GI+ + K L+GAGGA +A+ A GA+ ++++ RN + +
Sbjct: 117 A-----GIS--------VKKKKMTLLGAGGAAKAVTVQAALDGAKEIVVYKRNNQTFAQV 163
Query: 404 KALADAVSGEALHFEYLHEFFP--------EKGMILANASAIGMEPNSDQSPVPKEALKA 455
K + +S + +F ++ +L NA+ IGM DQSP+ ++
Sbjct: 164 KETFEQLSYRTSCEIKVRDFADTDQLRKDLKESCLLVNATDIGMGKKIDQSPLLDISMMH 223
Query: 456 YEL-VFDAVYTPRNTRLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRKL 513
L VFD +Y PR TRLL+EA +VGA +G+ M I Q F L+T P + KL
Sbjct: 224 ENLAVFDLIYAPRETRLLKEAKKVGAKGYNGLGMLIYQGAIAFELWTKEKMPIHVIEKL 282
>gi|385809656|ref|YP_005846052.1| shikimate 5-dehydrogenase [Ignavibacterium album JCM 16511]
gi|383801704|gb|AFH48784.1| Shikimate 5-dehydrogenase [Ignavibacterium album JCM 16511]
Length = 290
Score = 134 bits (338), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 88/293 (30%), Positives = 151/293 (51%), Gaps = 30/293 (10%)
Query: 237 TKIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLV--DDVKEFFRTYSGTDFAGFSV 294
T++ GLV +P+ H+ P +HN AF T + IY+P V ++K + + GF+V
Sbjct: 9 TQLVGLVGHPIKHTYSPFIHNVAFELTGLDYIYLPFNVIPSNLKSAIKGLVALGYKGFNV 68
Query: 295 GIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALRERQG 354
IPHK +V A +GA+NT++ +GK+ GYNTD + ++ +E
Sbjct: 69 TIPHKVKVKEFMSKVSEEASFVGAINTVLIE--EGKMFGYNTDVAGVLESLYAYRKE--- 123
Query: 355 INGVASHTSPIAGKIFVLVGAGGAGRALAFG--AKSRGARVIIFNRNYERAKALADAVSG 412
IA V++GAGG+ RA+ + R +R+ + NR +RA+ L
Sbjct: 124 ----------IADNECVVIGAGGSARAVIYTLIKHFRPSRIHLVNRTEQRAETLRQFFKT 173
Query: 413 EALHFE--YLHEFFP-------EKGMILANASAIGMEPNSDQSPVPKEALKAYE-LVFDA 462
+ + F+ ++E P + +++ NA+++GM P+ D + + ++ L + E +VFD
Sbjct: 174 K-IKFDSFTVNELIPPDIKDIIKNSVLIVNATSVGMHPDEDDAVLTQKDLFSKEQIVFDL 232
Query: 463 VYTPRNTRLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRKLVL 515
VY P T+LL+ A GA V G++M + QA F ++TG P + + K +L
Sbjct: 233 VYNPAQTKLLKLAESAGAKTVDGIKMLVNQAAKSFEIWTGEKMPVEQVEKALL 285
>gi|430837903|ref|ZP_19455853.1| shikimate 5-dehydrogenase [Enterococcus faecium E0688]
gi|430858336|ref|ZP_19475964.1| shikimate 5-dehydrogenase [Enterococcus faecium E1552]
gi|431369954|ref|ZP_19509653.1| shikimate 5-dehydrogenase [Enterococcus faecium E1627]
gi|430492183|gb|ELA68597.1| shikimate 5-dehydrogenase [Enterococcus faecium E0688]
gi|430545545|gb|ELA85518.1| shikimate 5-dehydrogenase [Enterococcus faecium E1552]
gi|430583701|gb|ELB22059.1| shikimate 5-dehydrogenase [Enterococcus faecium E1627]
Length = 284
Score = 134 bits (338), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 97/299 (32%), Positives = 151/299 (50%), Gaps = 36/299 (12%)
Query: 233 INPDTKIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYV-----PMLVDDVKEFFRTYSGT 287
I+ TK+ GL ++P HS P++HN AF + +Y+ PM + E RT+
Sbjct: 2 ISGQTKLAGLFADPASHSLSPLMHNTAFEANNIDAVYLAFQVNPMNLKQAVESVRTF--- 58
Query: 288 DFAGFSVGIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIED 347
D G ++ +P+K + DEV A+ IGAVNTI+ G+L+GYNTD + ++++
Sbjct: 59 DMLGVNLSMPNKTAVIPYLDEVSQEAQLIGAVNTIVHEK--GRLIGYNTDGAGFMQSVQE 116
Query: 348 ALRERQGINGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGAR-VIIFNRN---YERA 403
A GI+ I K L+GAGGA +A+ A GA ++++ RN + +
Sbjct: 117 A-----GIS--------IKKKKMTLLGAGGAAKAVTVQAALDGAEEIVVYKRNNQTFAQV 163
Query: 404 KALADAVSG------EALHFEYLHEFFPE--KGMILANASAIGMEPNSDQSPVPKEALKA 455
K + +S + F H+ + + +L NA+ IGM +QSP+ ++
Sbjct: 164 KETFEQLSYRTSCKIKVRDFADTHQLRKDLKESCLLVNATDIGMGKKINQSPLLDISMMH 223
Query: 456 YEL-VFDAVYTPRNTRLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRKL 513
L VFD +Y PR TRLL+EA +VGA +G+ M I Q F L+T P + KL
Sbjct: 224 ENLAVFDLIYAPRETRLLKEAKKVGAKGYNGLGMLIYQGAIAFELWTKEKMPIHVIEKL 282
>gi|436840750|ref|YP_007325128.1| Shikimate dehydrogenase [Desulfovibrio hydrothermalis AM13 = DSM
14728]
gi|432169656|emb|CCO23027.1| Shikimate dehydrogenase [Desulfovibrio hydrothermalis AM13 = DSM
14728]
Length = 272
Score = 134 bits (338), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 91/288 (31%), Positives = 151/288 (52%), Gaps = 25/288 (8%)
Query: 235 PDTKIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYV--PMLVDDVKEFFRTYSGTDFAGF 292
PD K+FG++ +P+GH+ P+LHN F +Y+ P + ++ F T+ +G
Sbjct: 6 PD-KLFGIIGHPLGHTMSPLLHNWGFAQQNIRAVYMAWPTQPESIENFMHTFRTLPVSGA 64
Query: 293 SVGIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALRER 352
SV IPHK + D++ AK+IGAVNT+ R + +++G NTD + + + LR
Sbjct: 65 SVTIPHKISVMDYIDKLTDRAKAIGAVNTLYWR--NDQVIGDNTDT----AGVSEPLR-- 116
Query: 353 QGINGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGARVI-IFNRNYERAKALADAVS 411
H + + K +L+GAGGA RA G +S I I NR +A LA+ +
Sbjct: 117 -------PHCAQV--KKALLIGAGGASRAAIVGLQSLQIEEIHITNRTQSKAGDLAEEFN 167
Query: 412 GEALHFEYLHEFFPEKGMILANASAIGMEPNSDQ-SPVPKEALKAYELVFDAVYTPRNTR 470
+ ++ + + ++ N++++GM ++ +P+ + A +V+D VY P T
Sbjct: 168 VSTVDWDNRGD---QHYDLIVNSTSLGMSGKLEKINPMILDNQDANTIVYDLVYNPLETV 224
Query: 471 LLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRKLVLEQF 518
LLREAA + G+EMF+ Q L QF+++TG E RKL+L +
Sbjct: 225 LLREAAARKCKTIHGIEMFLHQGLAQFKIWTGYDLDETAARKLLLSRL 272
>gi|260881130|ref|ZP_05893311.1| shikimate dehydrogenase [Mitsuokella multacida DSM 20544]
gi|260849607|gb|EEX69614.1| shikimate dehydrogenase [Mitsuokella multacida DSM 20544]
Length = 293
Score = 134 bits (338), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 103/299 (34%), Positives = 149/299 (49%), Gaps = 32/299 (10%)
Query: 233 INPDTKIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYV--PMLVDDVKEFFRTYSGTDFA 290
I TK G++ P+ HS P+L N A + +Y+ P+ + +KE F+
Sbjct: 8 IKGTTKNLGVMGWPIAHSLSPVLQNAAIEEAGLDYVYISLPVPPEKLKEAVAGLRAMQFS 67
Query: 291 GFSVGIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALR 350
G++V IPHK+ +A D V A+ IGAVNT++ R DG L GYNTDC + +
Sbjct: 68 GWNVTIPHKQAIMAELDVVDEDARIIGAVNTVVNR--DGHLTGYNTDCIGFMQPLA---- 121
Query: 351 ERQGINGVASHTSPIAGKIFVLVGAGGAGRALAFG---AKSRGARVIIFNRNYERAKALA 407
+QG SP GK L+GAGGA RA+ +G AK R R+ + RN +A+ LA
Sbjct: 122 -QQGF-------SP-KGKAATLLGAGGAARAVIWGLLRAKVR--RITLGVRNPAKAERLA 170
Query: 408 D--AVSGE--ALHFE---YLHEFFPEKGMILANASAIGMEPNSD-QSPVPKEALKAYELV 459
+ A GE LH+E +L +L N + +GM P+ + PV LK LV
Sbjct: 171 EEFASYGEIQVLHWEDGAFLDHLAVTD--LLVNTTPLGMYPHVEGMPPVDWTKLKKDALV 228
Query: 460 FDAVYTPRNTRLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRKLVLEQF 518
+D +YTP TR L EA G +++G M Q F L+TG M++ + E+
Sbjct: 229 YDIIYTPERTRFLSEAQAHGHAIINGEGMLAGQGAAAFTLWTGVTPDLALMKRALREEL 287
>gi|328857285|gb|EGG06402.1| hypothetical protein MELLADRAFT_74837 [Melampsora larici-populina
98AG31]
Length = 1581
Score = 134 bits (338), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 148/516 (28%), Positives = 228/516 (44%), Gaps = 61/516 (11%)
Query: 34 GADLVELCID---------------SMEFSHISEVDKLIQHPTLPAIVSYRLKSSR-KSS 77
G D VEL +D S+ F +V L + TLP I + R K
Sbjct: 1092 GCDAVELRVDLLSSAGKTPQASTVPSLHFIR-RQVAALRRLTTLPIIFTVRTDGQGGKFP 1150
Query: 78 DEACKNTCLQVLRRALDLDVEFVEMDYEVASDPLMSEIIYSRSNTKIIVSSYLNGGGKPT 137
+ + ++L L E+V D E+ P + + ++ +++ SY + GK +
Sbjct: 1151 GQGSEKEYFELLELGLRTGCEYV--DVELGHSPELIRQLGAKKGHSLLIGSYHDFAGKLS 1208
Query: 138 TEKLGDVIACMQATG--ADVMKLEIAVDSITD-LAPVFEMLTHCQV---PLIALAVGSRG 191
++ + QA AD++KL S+ D LA + TH PLI + +G G
Sbjct: 1209 WNS-KEMESKYQAIRKYADIVKLVTVAKSMDDNLALLNFRATHSSTSFPPLITINMGLEG 1267
Query: 192 LISQLLGPKFGGFLVYGSLGGKSVPGLPTLVSLKQVYQLEHINPDTKIFGLVSNPVGHSK 251
+S++L P L + L + PG T ++Q L +P ++ F L NP+GHS+
Sbjct: 1268 QMSRILSPVLSP-LTHELLPEPAAPGQLTYNQIQQALDLLGQHP-SRQFWLFGNPIGHSR 1325
Query: 252 GPILHNPAFRHTRFNG-IYVPMLVD--DVKEFFRTYSGTDFAGFSVGIPHKEPAVACCDE 308
P++HN +F +Y PM D D + DF G SV IP K ++ DE
Sbjct: 1326 SPLMHNTSFEALSLRSHVYSPMETDTLDKESVKAVLRAPDFGGASVTIPLKLEVLSLMDE 1385
Query: 309 VHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALRERQGINGVASHTSPIAGK 368
+ A+ +GAVNTIIRR KL+G NTD + + I +L + A
Sbjct: 1386 LTDEAREVGAVNTIIRR--GDKLIGDNTDWYAIATLIRRSLPADPTVRATA--------- 1434
Query: 369 IFVLVGAGGAGRALAFGAKSRGA-RVIIFNRNYERAKALADAVSGEALHFEYLHEFFPEK 427
++VGAGG RA + G R+ + NR RA+ L A+ + E L + E+
Sbjct: 1435 --LVVGAGGTSRAAVYALHRLGVNRIGLVNRTRSRAEELVAAMP-TSWSIEVLEDI--EE 1489
Query: 428 GMILANASAIGMEPNSDQSPVPKEALKA------YELVFDAVYTPRNTRLLREAAEVGAT 481
M L I P SD + VPKE LK EL ++ N +L + G
Sbjct: 1490 AMKLEPGIVISTVP-SDTTKVPKELLKRKGGGVLVELAYEINSGYEN--VLGD----GWK 1542
Query: 482 VVSGVEMFIRQALGQFRLFTGGLAPEDFMRKLVLEQ 517
V+G+E+ I Q QF ++TG P D + K++ E+
Sbjct: 1543 FVNGLEILIEQGSKQFEIWTGKKMPIDKVWKVIKEE 1578
>gi|75761259|ref|ZP_00741241.1| Shikimate 5-dehydrogenase [Bacillus thuringiensis serovar
israelensis ATCC 35646]
gi|74491241|gb|EAO54475.1| Shikimate 5-dehydrogenase [Bacillus thuringiensis serovar
israelensis ATCC 35646]
Length = 229
Score = 134 bits (338), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 84/244 (34%), Positives = 129/244 (52%), Gaps = 26/244 (10%)
Query: 238 KIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLVDD--VKEFFRTYSGTDFAGFSVG 295
+++G++ NP+GHS P++HN AF H N Y LV++ + E R +GF+V
Sbjct: 3 QLYGVIGNPIGHSLSPVMHNNAFEHLNMNAHYHAFLVEEEVLGEAVRGLKALGISGFNVT 62
Query: 296 IPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALRERQGI 355
PHK + DE+ PLA+ IGAVNT++ + +G+L+GYNTD + A++ E
Sbjct: 63 TPHKVAIMEYLDEIDPLARKIGAVNTVVHK--NGRLIGYNTDGIGFVRALQSISHE---- 116
Query: 356 NGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGARVI-IFNRNYERAKALADA----V 410
P+ GK +L+GAGGA RA+ F G + I + NR ++AK L A V
Sbjct: 117 --------PLQGKRILLLGAGGASRAIYFSLADVGVKEIDVANRTVDKAKELIAARTADV 168
Query: 411 SGEALHFEYLHEFFPEKGM--ILANASAIGMEPNSDQSPVPKEALKAYELVFDAVYTPRN 468
+ AL E E E+G I+ + IGM P+ + +P+ +LK +V D +Y P
Sbjct: 169 NSVALSLEKATE---EQGNYDIIIQTTTIGMHPHVEHTPLQICSLKKGTIVSDIIYNPFE 225
Query: 469 TRLL 472
T +
Sbjct: 226 TNFM 229
>gi|328949355|ref|YP_004366692.1| 3-dehydroquinate dehydratase [Treponema succinifaciens DSM 2489]
gi|328449679|gb|AEB15395.1| 3-dehydroquinate dehydratase [Treponema succinifaciens DSM 2489]
Length = 497
Score = 134 bits (338), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 109/367 (29%), Positives = 175/367 (47%), Gaps = 27/367 (7%)
Query: 148 MQATGADVMKLEIAVDSITDLAPVFEMLTHCQ-VPLIALAVGSRGLISQLLGPKFGGFLV 206
+ +G ++ K+ S+ D+ +FE + I LA+G+ G+ +++LG K FL
Sbjct: 143 LNPSGLEIPKIAFMPHSLDDVTNLFEQASKISGNNHIMLAMGTMGIPTRVLGAKLKNFLT 202
Query: 207 YGSLGGKSVPGLPTLVSLKQV-----YQLEHINPDTKIFGLVSNPVGHSKGPILHNPAFR 261
Y S +S+ + L V Y+ + IN TKIFG+ P+ + P LHN +
Sbjct: 203 YTS-APESIQNTSNIAHLDAVKLGGLYRTKSINESTKIFGITGWPLSGTSSPELHNTGYC 261
Query: 262 HTRFNGIYVPMLVDDVKEFFRTYSGTDFAGFSVGIPHKEPAVACCDEVHPLAKSIGAVNT 321
N +Y+P + ++ G SV +PHKE A+A D V A IG+ NT
Sbjct: 262 RHGMNAVYIPFPAEKFEQAIDFSEQVGVQGLSVTVPHKEAALARADFVDNAALEIGSSNT 321
Query: 322 IIRRPIDGKLVGYNTDCESAISAIEDALRERQGINGVASHTSPIAGKIFVLVGAGGAGRA 381
+I++ DGK + YNTD E + A+ + L + + K ++GAGGA +A
Sbjct: 322 LIKK--DGKWLAYNTDAEGFLKALLEFLNLKN-----------LKHKKISIIGAGGAAKA 368
Query: 382 LAFGAKSRGARVIIFNRNYERAKALADAVSGE--ALHFEYLHEFFPEKGMILANASAIGM 439
+A+ + G + IFNR +AK LA+ + L+FE + +I+ S GM
Sbjct: 369 IAYAVYNSGGKACIFNRTLSKAKELAEKYDFKYAPLNFESVSTIRKYSDVIIQTTSK-GM 427
Query: 440 ---EP-NSDQSPVPKEALKAYELVFDAVYTPRNTRLLREAAEVGATVVSGVEMFIRQALG 495
EP N + P+ E +FD +Y P+ T ++ A E G + +G M + Q
Sbjct: 428 HCEEPSNPENDPLYFYDFTGKEALFDIIYMPKATPIMVRAREAGCKICNGFSMLLYQGYR 487
Query: 496 QFRLFTG 502
QF L+TG
Sbjct: 488 QFELYTG 494
>gi|322517131|ref|ZP_08070015.1| shikimate dehydrogenase [Streptococcus vestibularis ATCC 49124]
gi|322124281|gb|EFX95792.1| shikimate dehydrogenase [Streptococcus vestibularis ATCC 49124]
Length = 285
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 93/291 (31%), Positives = 151/291 (51%), Gaps = 33/291 (11%)
Query: 232 HINPDTKIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLV--DDVKEFFRTYSGTDF 289
I+ T++ +V+NP+ HS P +HN AF T+ NG+YV + D+ E + D
Sbjct: 2 QIDGHTRLAAVVANPIKHSISPFIHNSAFEKTQINGVYVAWEIPESDLAETVKNIRRYDM 61
Query: 290 AGFSVGIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDAL 349
G ++ +P+KE + DE+ P A+ IGAVNT++ R DG+L+G+NTD +++++
Sbjct: 62 FGINLSMPYKEAVIPFLDEISPAAQLIGAVNTVVNR--DGRLIGHNTDGFGFFASLKN-- 117
Query: 350 RERQGINGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGAR---VIIFNRNYERA-KA 405
SP ++ +L GAGGA +A+ A GA+ V + +++++A K+
Sbjct: 118 ------------FSPKDARLMIL-GAGGAAKAIVTQAVLDGAKKVSVYVRPQSFDKAKKS 164
Query: 406 LADAVSGEALHFEY-----LHEFFPEKGM--ILANASAIGMEPNSDQSPVPKEA-LKAYE 457
+ H E+ L F E G +L NA+++GM+ S SP+P +
Sbjct: 165 FKSLLEQTTCHLEFHALNDLKYFKEELGQADLLVNATSVGMDGAS--SPIPTDTKFPKGL 222
Query: 458 LVFDAVYTPRNTRLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPED 508
LV D +Y P T L A + G V+G+ M + QA G F+L+TG P D
Sbjct: 223 LVADIIYQPFETPFLALARKQGIEAVNGLGMLLHQAAGAFKLWTGKDMPTD 273
>gi|384107652|ref|ZP_10008550.1| Shikimate 5-dehydrogenase [Treponema sp. JC4]
gi|383870508|gb|EID86110.1| Shikimate 5-dehydrogenase [Treponema sp. JC4]
Length = 498
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 108/365 (29%), Positives = 175/365 (47%), Gaps = 22/365 (6%)
Query: 148 MQATGADVMKLEIAVDSITDLAPVF-EMLTHCQVPLIALAVGSRGLISQLLGPKFGGFLV 206
M+ TG ++ K+ +++D+ +F E I +A+G+ G+ S++L ++
Sbjct: 143 MRKTGYEIPKIAFMPKTLSDVVNLFHESSLMTNYDHILVAMGAEGMPSRILTSISNSYMT 202
Query: 207 YGS---LGGKSVP-GLPTLVSLKQVYQLEHINPDTKIFGLVSNPVGHSKGPILHNPAFRH 262
Y S K+ G V L +Y + I+ T++FG+ P+ + P +HN +RH
Sbjct: 203 YTSPQETADKTASIGHIDPVVLNDLYNFKGISKSTQLFGITGWPLVKTSSPEIHNMGYRH 262
Query: 263 TRFNGIYVPMLVDDVKEFFRTYSGTDFAGFSVGIPHKEPAVACCDEVHPLAKSIGAVNTI 322
+ +Y P+ + E D G SV IP KE + E+ P IGA NT+
Sbjct: 263 HGIDAVYFPIRSQLISESLNFAEQLDVKGMSVTIPFKESVLYYLHELSPEVMQIGACNTV 322
Query: 323 IRRPIDGKLVGYNTDCESAISAIEDALRERQGINGVASHTSPIAGKIFVLVGAGGAGRAL 382
+R+ + K +GYNTDC + E AL E G N V + ++ ++GAGGA +A+
Sbjct: 323 VRK--NYKWIGYNTDC----TGFERALLEFLGSN-VKTKKMKVS-----IIGAGGAAKAI 370
Query: 383 AFGAKSRGARVIIFNRNYERAKALADAVSGEALHF-EYLHEFFPEKGMILANASAIGMEP 441
A+ K G + IFNR E A+ LA+ A E E ++ +++GM
Sbjct: 371 AYTVKKLGMKACIFNRTLETAQKLAEKYDFMAAKLDETSAMILDEYSSLIIQTTSVGMNA 430
Query: 442 ----NSDQSPVPKEALKAYELVFDAVYTPRNTRLLREAAEVGATVVSGVEMFIRQALGQF 497
+ + P+ + E VFD VY P +T ++R A+ G V +G +M QA QF
Sbjct: 431 EGPISPENDPIYFYKFRGTEKVFDIVYVPASTPVMRRASAAGCKVCNGYKMLEYQAYEQF 490
Query: 498 RLFTG 502
+LFTG
Sbjct: 491 KLFTG 495
>gi|145577949|gb|ABP82693.1| shikimate 5-dehydrogenase [Bacillus thuringiensis serovar
tohokuensis]
Length = 238
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 87/252 (34%), Positives = 132/252 (52%), Gaps = 26/252 (10%)
Query: 250 SKGPILHNPAFRHTRFNGIYVPMLVDD--VKEFFRTYSGTDFAGFSVGIPHKEPAVACCD 307
S P++HN AF H + Y LV++ + E + +GF+V PHK + D
Sbjct: 1 SLSPLMHNDAFEHLNIDAHYHAFLVEEETLGEAVKGLKALGVSGFNVTTPHKVSIMKYLD 60
Query: 308 EVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALRERQGINGVASHTSPIAG 367
E+ PLAK IGAVNT++ R D KL+GYNTD + +++ +E P+
Sbjct: 61 EIDPLAKQIGAVNTVVHR--DRKLIGYNTDGIGYVRSLQSISKE------------PLYQ 106
Query: 368 KIFVLVGAGGAGRALAFGAKSRGARVI-IFNRNYERAKALADA----VSGEALHFEYLHE 422
K +L+GAGGA RA+ F G + I I NR E+A L ++ +AL E E
Sbjct: 107 KRILLLGAGGACRAIYFSLADAGVKEIDIANRTVEKANHLLSGCQAKITSQALSLERATE 166
Query: 423 FFPEKGM--ILANASAIGMEPNSDQSPVPKEALKAYELVFDAVYTPRNTRLLREAAEVGA 480
E+G I+ + + IGM P+ +P+ +LK +V D +Y P T+LL++A GA
Sbjct: 167 ---EQGNYDIIIHTTTIGMHPHIQNTPLQIRSLKQGTIVSDIIYNPFETKLLQDAKAKGA 223
Query: 481 TVVSGVEMFIRQ 492
V +G++MF+ Q
Sbjct: 224 IVQNGIDMFVYQ 235
>gi|52549978|gb|AAU83827.1| shikimate 5-dehydrogenase [uncultured archaeon GZfos34A6]
Length = 272
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 89/283 (31%), Positives = 141/283 (49%), Gaps = 25/283 (8%)
Query: 238 KIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLV--DDVKEFFRTYSGTDFAGFSVG 295
I+G++ +PV HS P++HN AF+ + +Y+ V +++ + R +G +V
Sbjct: 3 NIYGIIGDPVAHSLSPVMHNAAFKKLGLDAVYIAFCVPLEELGDAIRGAKSLGISGLNVT 62
Query: 296 IPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALRERQGI 355
IP KE A++ +AK IGA+NTI GYNTD A+ +E+ + E
Sbjct: 63 IPLKEKALSFV-ATEEVAKKIGAINTI---DFSSTPTGYNTDGIGALMVLEETVGE---- 114
Query: 356 NGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGARVIIFNRNYERAKALADAVSGE-- 413
+ GK +++GAGGA RA++F + GA V + NR R+ LA +
Sbjct: 115 ---------VRGKNVLIIGAGGAARAISFYLDASGAMVTLANRTEGRSAQLASNLRNANS 165
Query: 414 -ALHFEYLHEFFPEKGMILANASAIGMEPNSDQSPVPKEALKAYELVFDAVYTPRNTRLL 472
+L E ++ IL NA+++GM PN D + + + + +VFD VY P T+LL
Sbjct: 166 ISLGAELKNQIRDSD--ILINATSVGMHPNEDATLITADLMHPDLVVFDIVYNPIETKLL 223
Query: 473 REAAEVGA-TVVSGVEMFIRQALGQFRLFTGGLAPEDFMRKLV 514
+EA G V+GV+M + Q F L+T P + M V
Sbjct: 224 KEAKRAGVKKTVNGVKMLVYQGAASFNLWTKKDPPVEVMENAV 266
>gi|294618196|ref|ZP_06697782.1| shikimate 5-dehydrogenase [Enterococcus faecium E1679]
gi|431499460|ref|ZP_19515039.1| shikimate 5-dehydrogenase [Enterococcus faecium E1634]
gi|431618722|ref|ZP_19522767.1| shikimate 5-dehydrogenase [Enterococcus faecium E1904]
gi|291595544|gb|EFF26851.1| shikimate 5-dehydrogenase [Enterococcus faecium E1679]
gi|430588096|gb|ELB26301.1| shikimate 5-dehydrogenase [Enterococcus faecium E1634]
gi|430603872|gb|ELB41383.1| shikimate 5-dehydrogenase [Enterococcus faecium E1904]
Length = 284
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 97/299 (32%), Positives = 150/299 (50%), Gaps = 36/299 (12%)
Query: 233 INPDTKIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYV-----PMLVDDVKEFFRTYSGT 287
I+ TK+ GL ++P HS P++HN AF + +Y+ PM + E RT+
Sbjct: 2 ISGQTKLAGLFADPASHSLSPLMHNTAFEANNIDAVYLAFKVNPMNLKQAVESIRTF--- 58
Query: 288 DFAGFSVGIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIED 347
D G ++ +P+K + DEV A+ IGAVNTI+ G+L+GYNTD + ++++
Sbjct: 59 DMLGVNLSMPNKTAVIPYLDEVSQEAQLIGAVNTIVHEK--GRLIGYNTDGAGFMQSVQE 116
Query: 348 ALRERQGINGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGAR-VIIFNRN---YERA 403
A GI+ I K L+GAGGA +A+ A GA ++++ RN + +
Sbjct: 117 A-----GIS--------IKKKKMTLLGAGGAAKAVTVQAALDGAEEIVVYKRNNQTFAQV 163
Query: 404 KALADAVSG------EALHFEYLHEFFPE--KGMILANASAIGMEPNSDQSPVPKEALKA 455
K + +S + F H+ + + +L NA+ IGM +QSP+ ++
Sbjct: 164 KETFEQLSYRTSCKIKVRDFADTHQLRKDLKESCLLVNATDIGMGKKINQSPLLDISMMH 223
Query: 456 YEL-VFDAVYTPRNTRLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRKL 513
L VFD +Y PR TRLL+EA +VGA +G+ M I Q F L T P + KL
Sbjct: 224 ENLAVFDLIYAPRETRLLKEAKKVGAKGYNGLGMLIYQGAIAFELLTKEKMPIHVIEKL 282
>gi|375307128|ref|ZP_09772418.1| quinate/shikimate dehydrogenase [Paenibacillus sp. Aloe-11]
gi|375080846|gb|EHS59064.1| quinate/shikimate dehydrogenase [Paenibacillus sp. Aloe-11]
Length = 296
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 91/299 (30%), Positives = 147/299 (49%), Gaps = 33/299 (11%)
Query: 232 HINPDTKIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLV--DDVKEFFRTYSGTDF 289
I+ T++ GL++ P+GHS P +HN AF N +Y+ V + ++E R +
Sbjct: 6 RIDGRTQLIGLLATPIGHSLSPAMHNLAFEKLGLNNVYMAFEVGNEQLEEVVRGLRALNI 65
Query: 290 AGFSVGIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDAL 349
G++V +P+K + DE+ A+ GAVNT++ +GKL GY+TD + L
Sbjct: 66 RGYNVSMPNKTTILQYLDELDDSARFTGAVNTVVN--TNGKLKGYSTDGSGYVRN----L 119
Query: 350 RERQGINGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRG-ARVIIFNRN---YERAKA 405
RE H + GK LVG+GGA +A A G A + IF R+ + RAK
Sbjct: 120 RE---------HGIDLKGKKMTLVGSGGAATPIAIEAARAGLAEISIFARDDQFFARAKE 170
Query: 406 LADAVSGEALHFEYLHEFFP-----------EKGMILANASAIGMEPNSDQSPVPK-EAL 453
++ + H + +P I AN + +GM+P +S + L
Sbjct: 171 NVRIINEDMKHAQVKASIYPLEDQEQLREEIRTSHIFANGTGVGMKPLEGKSVIEDVSML 230
Query: 454 KAYELVFDAVYTPRNTRLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRK 512
++ +V D VY+P +RL+ +A VGAT ++G+ M + Q F L+TG P DF+++
Sbjct: 231 RSDLIVTDVVYSPAKSRLMEQAESVGATAINGLGMMLWQGALAFELWTGQEMPVDFIKE 289
>gi|452205994|ref|YP_007486116.1| shikimate dehydrogenase [Natronomonas moolapensis 8.8.11]
gi|452082094|emb|CCQ35345.1| shikimate dehydrogenase [Natronomonas moolapensis 8.8.11]
Length = 264
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 114/279 (40%), Positives = 143/279 (51%), Gaps = 26/279 (9%)
Query: 238 KIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLVDDVKEFFRTYSGTD---FAGFSV 294
++FGL+ NPVGHS P +H A+ + YV D R +G D AG +V
Sbjct: 2 QVFGLIGNPVGHSVSPPMHEAAYEVCGMDARYV-TFEPDPGSIDRVLTGADALGIAGLNV 60
Query: 295 GIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALRERQG 354
IP KE A D PLA IGAVNT+ DG GYNTD + A+E
Sbjct: 61 TIPFKEDVAAAVD-TDPLAGRIGAVNTVAFE--DGP-TGYNTDASGVVRALE-------- 108
Query: 355 INGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGARVIIFNRNYERAKALADAVSGEA 414
H V+VGAGGAGRA AF G V I NR ERA+ALA AV G +
Sbjct: 109 ------HHDVALSGRAVVVGAGGAGRAAAFALADGGMDVHIANRTVERAEALAAAVPGAS 162
Query: 415 LH-FEYLHEFFPEKGMILANASAIGMEPNSDQSPVPKEALKAYELVFDAVYTPRNTRLLR 473
+ L +L NA+++GME S+++PVPK AL A V DAVY P TRLL
Sbjct: 163 SGGLDGLTAAL-SGADVLVNATSVGME--SEETPVPKAALHADLAVLDAVYAPLETRLLA 219
Query: 474 EAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRK 512
+AAEVGAT V G M + Q + F ++TG AP + M +
Sbjct: 220 DAAEVGATTVDGAWMLLFQGVEAFEIWTGRDAPVETMNE 258
>gi|225027299|ref|ZP_03716491.1| hypothetical protein EUBHAL_01555 [Eubacterium hallii DSM 3353]
gi|224955382|gb|EEG36591.1| shikimate dehydrogenase [Eubacterium hallii DSM 3353]
Length = 286
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 90/297 (30%), Positives = 152/297 (51%), Gaps = 26/297 (8%)
Query: 230 LEHINPDTKIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLVDD--VKEFFRTYSGT 287
+ ++ +TK+ L+ +P+ S + N + N IY V++ + +
Sbjct: 1 MAKVDINTKMITLLGDPLKQSFAAQMQNCGYEAAGLNMIYFYTEVNNEHLADVVNGIRYM 60
Query: 288 DFAGFSVGIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIED 347
+FAGF+V P+K + DE+ PL + +GA NT+++ P +GKLVGYNTD I ++E
Sbjct: 61 NFAGFAVTKPNKVKVLEYLDELDPLCEKMGASNTVVKTP-EGKLVGYNTDGIGFIRSME- 118
Query: 348 ALRERQGINGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGARVIIFNRNYERA-KAL 406
R G I I+ +G+GGAGRA+ GA+ I +E + K+L
Sbjct: 119 ----RDG-------NVKIDENIYFCIGSGGAGRAMCSALAYYGAKKIYITDVFEESSKSL 167
Query: 407 ADAVSGEALHFEYLHEFFP-------EKGMILANASAIGMEPNSDQSPVPKEALKAYELV 459
+ ++ +F + EF P ++ ++ NAS IGM + ++P+PKE + +
Sbjct: 168 VEDINK---NFAPVAEFCPAGDFSKVKEATVVLNASGIGMGSHIGENPLPKEFISKDQFY 224
Query: 460 FDAVYTPRNTRLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRKLVLE 516
FDA Y P T+ L +A E GAT+++G+ M + Q Q +TG P + MR+ +L+
Sbjct: 225 FDACYNPAKTQFLLDAEEAGATILNGLGMSLYQGAAQIEYWTGQEPPIEAMRQKLLD 281
>gi|145577935|gb|ABP82686.1| shikimate 5-dehydrogenase [Bacillus thuringiensis serovar vazensis]
Length = 238
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 86/250 (34%), Positives = 130/250 (52%), Gaps = 22/250 (8%)
Query: 250 SKGPILHNPAFRHTRFNGIYVPMLVDD--VKEFFRTYSGTDFAGFSVGIPHKEPAVACCD 307
S P++HN AF H + Y LV++ + E + +GF+V PHK + D
Sbjct: 1 SLSPVMHNDAFEHLNMDAHYHAFLVEEEALGEAVKGLKALGISGFNVTTPHKVAIMEYLD 60
Query: 308 EVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALRERQGINGVASHTSPIAG 367
E+ PLA+ IGAVNT++ R DGKL+GYNTD + A++ + P+
Sbjct: 61 EIAPLARQIGAVNTVVHR--DGKLIGYNTDGIGFVRALQSISED------------PLQE 106
Query: 368 KIFVLVGAGGAGRALAFGAKSRGARVI-IFNRNYERAKALADA----VSGEALHFEYLHE 422
K +L+GAGGA RA+ F G + I I NR ++AK L V+ AL E E
Sbjct: 107 KRILLIGAGGASRAIYFSLADVGVKEIDIANRTRDKAKNLISGCMANVNSHALSLECAAE 166
Query: 423 FFPEKGMILANASAIGMEPNSDQSPVPKEALKAYELVFDAVYTPRNTRLLREAAEVGATV 482
E +I+ + IGM P + +P+ +LK +V D +Y P T++L +A E GA +
Sbjct: 167 NQGEYDIII-QTTTIGMHPYVEYTPLEIRSLKQGTIVSDIIYNPFETKILGDAKEQGAII 225
Query: 483 VSGVEMFIRQ 492
+G++MF+ Q
Sbjct: 226 QNGIDMFVYQ 235
>gi|218437685|ref|YP_002376014.1| shikimate 5-dehydrogenase [Cyanothece sp. PCC 7424]
gi|226729102|sp|B7KFV3.1|AROE_CYAP7 RecName: Full=Shikimate dehydrogenase
gi|218170413|gb|ACK69146.1| shikimate 5-dehydrogenase [Cyanothece sp. PCC 7424]
Length = 288
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 88/293 (30%), Positives = 139/293 (47%), Gaps = 29/293 (9%)
Query: 233 INPDTKIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLV--DDVKEFFRTYSGTDFA 290
I TK+ G++ +PV HS P++HN H N IYVP V +D++
Sbjct: 4 ITGKTKLLGVIGDPVEHSLSPVMHNAVIDHLNLNYIYVPFAVKPEDLRTAIAGLEAIGVV 63
Query: 291 GFSVGIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALR 350
GF++ IPHK+ + + A+ +GAVNT+ R + G NTD ++ ++
Sbjct: 64 GFNLTIPHKQTIIPLLSTISETAQLVGAVNTVWRT--ETGWSGTNTDVHGFLAPLKR--- 118
Query: 351 ERQGINGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGARVI-IFNRNYERA----KA 405
+N S SP V++G GGA RA+ G G R I + R E+ ++
Sbjct: 119 ----LNLPWSQVSP------VILGNGGAARAVVVGCYEMGCRQISVVGRTKEKLDHFYQS 168
Query: 406 LADAVSGEALHFEYLHEFFPE---KGMILANASAIGMEPNSDQSPVPKEALKAYE---LV 459
+ EAL YL E P+ K +L N + +GM P+ DQSPV +K + +
Sbjct: 169 WQNTPIQEALRV-YLWEDLPQLVSKTQLLINTTPLGMSPHIDQSPVDLTVMKKLQPGAIA 227
Query: 460 FDAVYTPRNTRLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRK 512
+D +YTP T L+EA + GA ++ G+EM +Q ++ P + M +
Sbjct: 228 YDLIYTPNPTLFLKEAQQQGAIIIDGLEMLAQQGALALSIWIKQSVPVEIMSQ 280
>gi|145577923|gb|ABP82680.1| shikimate 5-dehydrogenase [Bacillus mycoides]
Length = 238
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 86/250 (34%), Positives = 131/250 (52%), Gaps = 22/250 (8%)
Query: 250 SKGPILHNPAFRHTRFNGIYVPMLVDD--VKEFFRTYSGTDFAGFSVGIPHKEPAVACCD 307
S P++HN AF H + Y LV++ + E + +GF+V PHK + D
Sbjct: 1 SLSPVMHNDAFEHLNMDAHYHAFLVEEEALGEAVKGLKALGISGFNVTTPHKVAIMEYLD 60
Query: 308 EVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALRERQGINGVASHTSPIAG 367
E+ PLA+ IGAVNT++ R DGKL+GYNTD + A++ + P+
Sbjct: 61 EIAPLARQIGAVNTVVHR--DGKLIGYNTDGIGFVRALQSISED------------PLQE 106
Query: 368 KIFVLVGAGGAGRALAFGAKSRGARVI-IFNRNYERAKALADA----VSGEALHFEYLHE 422
K +L+GAGGA RA+ F G + I I NR ++AK L V+ AL E E
Sbjct: 107 KRILLIGAGGASRAIYFSLADVGVKEIDIANRTRDKAKNLISGCMANVNSHALSSECAAE 166
Query: 423 FFPEKGMILANASAIGMEPNSDQSPVPKEALKAYELVFDAVYTPRNTRLLREAAEVGATV 482
E +I+ + IGM P+ + +P+ +LK +V D +Y P T++L +A E GA +
Sbjct: 167 NQGEYDIII-QTTTIGMHPHVEYTPLEIRSLKQGTIVSDIIYNPFETKILGDAKEQGAII 225
Query: 483 VSGVEMFIRQ 492
+G++MF+ Q
Sbjct: 226 QNGIDMFVYQ 235
>gi|452992543|emb|CCQ95970.1| Shikimate dehydrogenase [Clostridium ultunense Esp]
Length = 288
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 86/286 (30%), Positives = 145/286 (50%), Gaps = 27/286 (9%)
Query: 233 INPDTKIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLVD--DVKEFFRTYSGTDFA 290
IN + ++ L+ NP+ S PI++N ++ N IY+ V D+ + + +
Sbjct: 3 INFNKDVYCLIGNPIAKSLSPIINNSYYKIIGKNNIYLAFNVKEKDLADVINVFKILNIK 62
Query: 291 GFSVGIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALR 350
GF+V +PHK + D + AK +GAVNT+ + +G+L+GYNTD + ++E
Sbjct: 63 GFNVTLPHKISIMEHLDSISDEAKILGAVNTVKNK--NGRLIGYNTDGMGFLKSLE---L 117
Query: 351 ERQGINGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGAR-VIIFNRNYERAKALADA 409
E G+ K +++GAGGA A++ G + +II NR +AK LA+
Sbjct: 118 EDVGV----------KDKTVLVLGAGGAANAISISLAKEGVKKIIISNRTLSKAKILAEK 167
Query: 410 VSGE--ALHFEY----LHEFFPEKGMILANASAIGMEPNSDQSPVPKEALKAYELVFDAV 463
+S + + EY L EK I+ N +++GM PN D+SP+ +++D +
Sbjct: 168 ISRKFPKVTSEYDSLKLKNVRKEKIDIIVNCTSVGMHPNIDESPINLHGFSENLIIYDII 227
Query: 464 YTPRNTRLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDF 509
Y PR T+L+ A + G ++G+ M I QAL ++ L ED+
Sbjct: 228 YKPRRTKLMELAEKKGYYTINGLSMLINQALCSQEIW---LEVEDY 270
>gi|428213951|ref|YP_007087095.1| shikimate dehydrogenase [Oscillatoria acuminata PCC 6304]
gi|428002332|gb|AFY83175.1| shikimate dehydrogenase [Oscillatoria acuminata PCC 6304]
Length = 288
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 82/302 (27%), Positives = 143/302 (47%), Gaps = 29/302 (9%)
Query: 230 LEHINPDTKIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLV--DDVKEFFRTYSGT 287
+ I T++ G++ PV HS P++HN A + +Y+P V D+ ++
Sbjct: 1 MPTITGTTQLLGVIGYPVKHSLSPVMHNAAITDMGVDFVYLPWPVAPSDLPTAIAGFAAI 60
Query: 288 DFAGFSVGIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIED 347
GFS+ IPHK+ + E+ P+A+++GAVNT+ R P G NTD E ++ ++
Sbjct: 61 GVRGFSITIPHKQAIMPLLSEISPVAQAVGAVNTVWRTPT--GWAGTNTDVEGFLAPLKG 118
Query: 348 ALRERQGINGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRG-ARVIIFNRNYERAKAL 406
R P + V++G GGA RA+ G G A++ + RN ++ +A
Sbjct: 119 GDR-------------PWHQTLAVILGCGGAARAVVAGLAQLGCAKICVVGRNLDKLQAF 165
Query: 407 ADAVSGE------ALH-FEYLHEFFPEKGMILANASAIGMEPNSDQSPVPKEALKAYE-- 457
+ ++H + L + P+ G+ L N++ +GM P+ SPV + L
Sbjct: 166 QTSWQDSPWPVNLSVHDWSELPQLLPQAGL-LVNSTPVGMSPDVGHSPVTPDLLATLPQG 224
Query: 458 -LVFDAVYTPRNTRLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRKLVLE 516
+ +D +YTP T LR+A VG + G EM ++Q +++ P D M + + +
Sbjct: 225 AIAYDLIYTPSPTEFLRQAQAVGLLAIDGSEMLVQQGAAALQIWLDRPVPIDIMGQALRQ 284
Query: 517 QF 518
Sbjct: 285 HL 286
>gi|328541693|ref|YP_004301802.1| shikimate 5-dehydrogenase [Polymorphum gilvum SL003B-26A1]
gi|326411445|gb|ADZ68508.1| Shikimate 5-dehydrogenase [Polymorphum gilvum SL003B-26A1]
Length = 281
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 101/292 (34%), Positives = 147/292 (50%), Gaps = 44/292 (15%)
Query: 242 LVSNPVGHSKGPILHNPAFRHTRFNGIYV--PMLVDDVKEFFRTYSGTDFAGFSVGIPHK 299
+ PV HS+ P++H + G Y+ P+ +D + F+R + + G +V +PHK
Sbjct: 9 ITGWPVAHSRSPLVHGHWLKKYGLAGDYIRLPVAPEDAERFYRHFGESGLVGCNVTVPHK 68
Query: 300 EPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALRERQGINGVA 359
E A A CDE+ A+++GAVNT+ DG+L G NTD + ++ Q G
Sbjct: 69 ETAAAACDELDEAARAMGAVNTLWLDG-DGRLCGANTDGIGFLGNLD------QRAPGWD 121
Query: 360 SHTSPIAGKIFVLVGAGGAGRALAFGAKSRG-ARVIIFNRNYERAKALADAVSGEALHFE 418
+ P V++GAGGA RA+ + ++RG A V IFNR E+A LAD HF
Sbjct: 122 ARPGPA-----VVLGAGGAARAVVWALRARGFAPVKIFNRTTEKASQLAD-------HFG 169
Query: 419 YLHEFFPE--------KGMILANASAIGMEPNS----DQSPVPKEALKAYELVFDAVYTP 466
+ E +P + +L N +A GM D +PK+A LV D +YTP
Sbjct: 170 FGVEAYPWDKLCEHLGQAALLVNTTAAGMTGKPPLQIDLDGLPKDA-----LVTDIIYTP 224
Query: 467 RNTRLLREAAEVGATVVSGVEMFIRQALGQF-RLFTGGLAPE--DFMRKLVL 515
T LLR+AA G V G+ M + QA F R F G+ PE D +R++VL
Sbjct: 225 LETDLLRQAAARGNRTVDGLGMLLHQAAPGFERWF--GVRPEVDDELRRIVL 274
>gi|294616615|ref|ZP_06696391.1| shikimate 5-dehydrogenase [Enterococcus faecium E1636]
gi|430849862|ref|ZP_19467629.1| shikimate 5-dehydrogenase [Enterococcus faecium E1185]
gi|291590565|gb|EFF22298.1| shikimate 5-dehydrogenase [Enterococcus faecium E1636]
gi|430536557|gb|ELA76924.1| shikimate 5-dehydrogenase [Enterococcus faecium E1185]
Length = 284
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 96/299 (32%), Positives = 151/299 (50%), Gaps = 36/299 (12%)
Query: 233 INPDTKIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYV-----PMLVDDVKEFFRTYSGT 287
I+ TK+ GL ++P HS P++HN AF + +Y+ PM + E RT+
Sbjct: 2 ISGQTKLAGLFADPASHSLSPLMHNTAFEANNIDAVYLAFQVNPMNLKQAVESIRTF--- 58
Query: 288 DFAGFSVGIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIED 347
D G ++ +P+K + DEV A+ IGAVNTI+ G+L+GYNTD + ++++
Sbjct: 59 DMLGVNLSMPNKTAVIPYLDEVSQEAQLIGAVNTIVHEK--GRLIGYNTDGAGFMQSVQE 116
Query: 348 ALRERQGINGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGAR-VIIFNRN---YERA 403
A GI+ I K L+GAGGA +A+ A GA ++++ RN + +
Sbjct: 117 A-----GIS--------IKKKKMTLLGAGGAAKAVTVQAALDGAEEIVVYKRNNQTFAQV 163
Query: 404 KALADAVSG------EALHFEYLHEFFPE--KGMILANASAIGMEPNSDQSPVPKEALKA 455
K + +S + F H+ + + ++ NA+ IGM +QSP+ ++
Sbjct: 164 KETFEQLSYRTSCKIKVRDFADTHQLRKDLKESCLIVNATDIGMGKKINQSPLLDISMMH 223
Query: 456 YEL-VFDAVYTPRNTRLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRKL 513
L VFD +Y PR TRLL+EA +VGA +G+ M I Q F L+T P + KL
Sbjct: 224 ENLAVFDLIYAPRETRLLKEAKKVGAKGYNGLGMLIYQGAIAFELWTKEKMPIHVIEKL 282
>gi|220931440|ref|YP_002508348.1| shikimate 5-dehydrogenase [Halothermothrix orenii H 168]
gi|254806746|sp|B8D2C6.1|AROE_HALOH RecName: Full=Shikimate dehydrogenase
gi|219992750|gb|ACL69353.1| shikimate 5-dehydrogenase [Halothermothrix orenii H 168]
Length = 289
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 95/288 (32%), Positives = 146/288 (50%), Gaps = 29/288 (10%)
Query: 237 TKIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLV--DDVKEFFRTYSGTDFAGFSV 294
T++ GL+ P+GHS P +HN A++ N +Y+P+ + D +KE +F G +V
Sbjct: 6 TQVVGLMGYPLGHSMSPAMHNRAYKDLGINYVYLPLEIKPDFLKEGIEGLRAFNFRGVNV 65
Query: 295 GIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALRERQG 354
IP+KE + DE+ LA IGAVNTI+ GKL GYNTD +ED
Sbjct: 66 TIPYKEKVIPYLDEIDRLAGEIGAVNTIVNN--GGKLKGYNTDALGFKKMLED------- 116
Query: 355 INGVASHTSPIAGKIFVLVGAGGAGRAL-AFGAKSRGARVIIFNRNYERAKALAD----- 408
+ I G V++GAGGA RA+ A A+ + + + NR ++A L
Sbjct: 117 -----DCSFEIKGTKAVIIGAGGASRAVGAVLAREGASEIFLLNRTLKKAAKLVGIWNKT 171
Query: 409 --AVSGEALHFEYLHEFFP--EKGMILANASAIGMEPNSDQSPV-PKEALKAYELVFDAV 463
+ AL + ++ P ++ ++ + + +GM P PV KEA+ LV D V
Sbjct: 172 YPGIKTVALPLDE-DKYLPVVKRCDVIIDTTPVGMAPGIKGGPVIAKEAITRDTLVVDLV 230
Query: 464 YTPRNTRLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMR 511
Y P T L++ +VGA ++G M I QA F+L+T G+ PE F++
Sbjct: 231 YNPPETTLIKAGRQVGARTMNGFPMLIYQAAYAFKLWT-GIKPELFIK 277
>gi|300867823|ref|ZP_07112465.1| Shikimate dehydrogenase [Oscillatoria sp. PCC 6506]
gi|300334154|emb|CBN57639.1| Shikimate dehydrogenase [Oscillatoria sp. PCC 6506]
Length = 292
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 85/292 (29%), Positives = 141/292 (48%), Gaps = 21/292 (7%)
Query: 233 INPDTKIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYV--PMLVDDVKEFFRTYSGTDFA 290
I TK+ G++ +P+ HS P++HN A H + +Y+ P+ +D+ ++
Sbjct: 2 IKGTTKLLGVIGHPIEHSLSPVMHNAALSHLGLDIVYLAFPVKPEDLNVAISGFAAVGLL 61
Query: 291 GFSVGIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALR 350
GFS+ IPHK+ + EV P+A ++GAVNT+ R G NTD ++ + +L
Sbjct: 62 GFSITIPHKQGILPLLSEVSPVAIAVGAVNTVYRT--ANGWGGTNTDVRGFLAPLR-SLS 118
Query: 351 ERQGINGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRG-ARVIIFNRNYERAKALADA 409
+ G S K+ V++G+GGA RA+ G G A + + R+ ++ +
Sbjct: 119 LKTGTKQDWSQ------KVAVILGSGGAARAVVAGCAELGCAEIHVVGRSEQKLTEFQQS 172
Query: 410 VSGEALHFEYLHEFFPE------KGMILANASAIGMEPNSDQSPVPKEALKAYE---LVF 460
L L + E K +L NA+ IGM P D+SPV A++ + +
Sbjct: 173 WVNSPLAVNLLTHTWEELPMLISKADLLVNATPIGMYPRGDESPVALSAIERLSEGAIAY 232
Query: 461 DAVYTPRNTRLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRK 512
D +YTP T L++A E GA + G+EM ++Q ++ P D MR+
Sbjct: 233 DLIYTPNPTLFLKQAQERGAIAIDGLEMLVQQGAAALEIWLQQPIPVDVMRQ 284
>gi|227551431|ref|ZP_03981480.1| shikimate dehydrogenase [Enterococcus faecium TX1330]
gi|257895956|ref|ZP_05675609.1| quinate/shikimate 5-dehydrogenase [Enterococcus faecium Com12]
gi|227179440|gb|EEI60412.1| shikimate dehydrogenase [Enterococcus faecium TX1330]
gi|257832521|gb|EEV58942.1| quinate/shikimate 5-dehydrogenase [Enterococcus faecium Com12]
Length = 284
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 97/299 (32%), Positives = 150/299 (50%), Gaps = 36/299 (12%)
Query: 233 INPDTKIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYV-----PMLVDDVKEFFRTYSGT 287
I+ TK+ GL ++P HS P++HN AF + +Y+ PM + E RT+
Sbjct: 2 ISGQTKLAGLFADPASHSLSPLMHNTAFEANNIDAVYLAFKVNPMNLKQAVESIRTF--- 58
Query: 288 DFAGFSVGIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIED 347
D G ++ +P+K + DEV A+ IGAVNTI+ G+L+GYNTD + ++++
Sbjct: 59 DMLGVNLSMPNKTAVIPYLDEVSQEAQLIGAVNTIVHEK--GRLIGYNTDGAGFMQSVQE 116
Query: 348 ALRERQGINGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGAR-VIIFNRN------- 399
A GI+ + K L+GAGGA +A+ A GA+ ++++ RN
Sbjct: 117 A-----GIS--------VKKKKVTLLGAGGAAKAVTVQAALDGAKEIVVYKRNNQTFAQV 163
Query: 400 YERAKALADAVSGEALHFEYLHEFFPEKGM----ILANASAIGMEPNSDQSPVPKEALKA 455
E + L+ S E ++ + K + +L NA+ IGM DQSP+ +
Sbjct: 164 KETFEQLSYRTSCEIKVRDFADTYQLRKDLKESCLLVNATDIGMGKKIDQSPLLDINMMH 223
Query: 456 YEL-VFDAVYTPRNTRLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRKL 513
+L VFD +Y P TRLL+EA +VGA +G+ M I Q F L+T P + KL
Sbjct: 224 EKLAVFDLIYAPSETRLLKEAKKVGAKGYNGLGMLIYQGAIAFELWTKEKMPIHVIEKL 282
>gi|294501322|ref|YP_003565022.1| shikimate 5-dehydrogenase [Bacillus megaterium QM B1551]
gi|294351259|gb|ADE71588.1| shikimate 5-dehydrogenase [Bacillus megaterium QM B1551]
Length = 279
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 91/289 (31%), Positives = 151/289 (52%), Gaps = 27/289 (9%)
Query: 237 TKIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLVDDVKEFFRTYSG----TDFAGF 292
+ ++GLV P+GHS P++ N AF+ + Y ++ V F + G + GF
Sbjct: 2 STLYGLVGYPLGHSLSPLMQNDAFKRLNMDAHYEAFPIEPVH--FESAIGELKDKNIQGF 59
Query: 293 SVGIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALRER 352
+V IP+K + DEV PLAK+IGAVNT++ + DG+ +GYNTD E ++++ L+
Sbjct: 60 NVTIPYKVDIMKHLDEVDPLAKAIGAVNTVVNQ--DGRYIGYNTDGEGYVTSL---LKAV 114
Query: 353 QGINGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGAR--VIIFNRNYERAKALAD-- 408
+G ++ K +++GAGGA +A+ + ++ A + I NR E+A LA+
Sbjct: 115 EG---------SLSQKRILIIGAGGAAKAIFYTIAAQHAPEVIAICNRTVEKAAILANEL 165
Query: 409 --AVSGEALHFEYLHEFFPEKGMILANASAIGMEPNSDQSPVPKEALKAYELVFDAVYTP 466
+ A+ + +I+ N +++GM PN D+ P+ L+ +V D +Y P
Sbjct: 166 PFSTKTAAMSISDAEKQLDTFDIII-NTTSVGMYPNVDELPLALTLLQKEAVVSDIIYNP 224
Query: 467 RNTRLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRKLVL 515
T+LL+EA GA +GV MF+ Q F +T E+ M +VL
Sbjct: 225 LKTKLLKEAEAKGAGTHNGVGMFVLQGALAFEKWTNVRPDEEAMEHIVL 273
>gi|308067676|ref|YP_003869281.1| shikimate dehydrogenase [Paenibacillus polymyxa E681]
gi|305856955|gb|ADM68743.1| Shikimate dehydrogenase [Paenibacillus polymyxa E681]
Length = 296
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 91/299 (30%), Positives = 147/299 (49%), Gaps = 33/299 (11%)
Query: 232 HINPDTKIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLV--DDVKEFFRTYSGTDF 289
I+ T++ GL++ P+GHS P +HN AF N +Y+ V + ++E R +
Sbjct: 6 RIDGRTQLIGLLATPIGHSLSPAMHNLAFEKLGLNNVYMAFEVGNEQLEEVVRGMRALNI 65
Query: 290 AGFSVGIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDAL 349
G++V +P+K + DE+ AK GAVNT++ DGKL GY+TD + L
Sbjct: 66 RGYNVSMPNKTTILQYLDELDDSAKFTGAVNTVVN--TDGKLKGYSTDGSGYVRN----L 119
Query: 350 RERQGINGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRG-ARVIIFNRN---YERAKA 405
RE H + GK LVG+GGA +A A G A + IF RN + RA+
Sbjct: 120 RE---------HGIGLKGKKMTLVGSGGAATPIAIEAAQAGLAEISIFARNDQFFARAEE 170
Query: 406 LADAVSGEALHFEYLHEFFP-----------EKGMILANASAIGMEPNSDQSPVPK-EAL 453
++ + H + +P ILAN + +GM+P +S + L
Sbjct: 171 NVRIINEDMKHTQVKANIYPLENQEQLREEIRTSHILANGTGVGMKPLEGKSVIEDVSML 230
Query: 454 KAYELVFDAVYTPRNTRLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRK 512
++ +V D VY+P ++L+ +A VGAT ++G+ M + Q F L+TG P ++++
Sbjct: 231 RSDLIVTDVVYSPAKSKLMEQAESVGATAINGLGMMLWQGALAFELWTGQEMPVAYIKE 289
>gi|9087115|sp|O26344.2|AROE_METTH RecName: Full=Shikimate dehydrogenase
Length = 283
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 100/288 (34%), Positives = 149/288 (51%), Gaps = 27/288 (9%)
Query: 233 INPDTKIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLV--DDVKEFFRTYSGTDFA 290
I T + G++ +P+GHS PI+HN AFR + IYVP V +++K
Sbjct: 2 ITGKTHVTGIMGHPLGHSLSPIMHNAAFRSLGMDWIYVPFPVKPENLKAAVEGLRALGVE 61
Query: 291 GFSVGIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALR 350
G +V IPHKE + D++H A IGAVNT+ + DG + GYNTD + A+E+
Sbjct: 62 GVNVTIPHKEAVLEYIDDIHGTAALIGAVNTL--KFDDGTVRGYNTDASGCLRALEE--- 116
Query: 351 ERQGINGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGAR-VIIFNRNYERAKALADA 409
+ + G +++GAGGA RA AF +GA + I NR E+A+ LA+
Sbjct: 117 -----------VTSVEGSSVLILGAGGAARACAFQLAEKGASDITILNRTPEKARLLAED 165
Query: 410 VSGEALHFEYLHEFFP------EKGMILANASAIGMEPNSDQSP-VPKEALKAYELVFDA 462
++ + L FE + + + IL + + +GM P++D P V E + +V D
Sbjct: 166 MA-DKLGFEASYGGYELIQGSVKSADILIDTTPVGMHPHTDDRPLVGAELMHEGLVVHDL 224
Query: 463 VYTPRNTRLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFM 510
VY P+ T LLREA A VSG+ M + Q + FR++TG P D M
Sbjct: 225 VYNPQRTVLLREAERASAIPVSGIRMLLYQGVEAFRIWTGRDPPLDVM 272
>gi|345302028|ref|YP_004823930.1| shikimate dehydrogenase [Rhodothermus marinus SG0.5JP17-172]
gi|345111261|gb|AEN72093.1| Shikimate dehydrogenase [Rhodothermus marinus SG0.5JP17-172]
Length = 297
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 101/302 (33%), Positives = 146/302 (48%), Gaps = 31/302 (10%)
Query: 233 INPDTKIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLV--DDVKEFFRTYSGTDFA 290
I T+ L+ +PV HS P++HN FR + +Y+ V D + E FA
Sbjct: 9 IRATTRPVALLGDPVAHSFSPLIHNTGFRTQGLDYVYLACRVPKDALPEAIAGLRALGFA 68
Query: 291 GFSVGIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGK----LVGYNTDCESAISAIE 346
G +V IPHKE D P A++IGAVNTI+ R DG L+G NTD E + ++
Sbjct: 69 GANVTIPHKEAVRPLLDRCTPRAEAIGAVNTIVCR-ADGSGTVALIGDNTDVEGFLEPLQ 127
Query: 347 DALRERQGINGVASHTSPIAGKIFVLVGAGGAGRALAFG--AKSRGARVIIFNRNYERAK 404
L +R + G V++GAGGA RA+ + + R R+ I R R +
Sbjct: 128 P-LADR------------LTGAEMVVLGAGGAARAVVYALLTEFRPTRLTIVARTPARGE 174
Query: 405 ALADAVSGEALHFEYLHEFFPEKGM-------ILANASAIGMEPNSDQSPVPK-EALKAY 456
ALA + H L P++ ++ NA+ +GM P+ SP P E
Sbjct: 175 ALAADFATYDTHGA-LQVAAPDQAAPAIRSARLIVNATPVGMHPHVAASPWPHAEDFGPE 233
Query: 457 ELVFDAVYTPRNTRLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRKLVLE 516
++V+D VY P TRLLREAA GAT + G+ M I QA +R +TG P + ++ +
Sbjct: 234 QIVYDLVYNPVRTRLLREAATRGATPIDGLTMLIGQAAAAYRQWTGHELPREAVQAALKP 293
Query: 517 QF 518
F
Sbjct: 294 LF 295
>gi|425058431|ref|ZP_18461812.1| shikimate dehydrogenase [Enterococcus faecium 504]
gi|403038372|gb|EJY49588.1| shikimate dehydrogenase [Enterococcus faecium 504]
Length = 284
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 98/299 (32%), Positives = 150/299 (50%), Gaps = 36/299 (12%)
Query: 233 INPDTKIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYV-----PMLVDDVKEFFRTYSGT 287
I+ TK+ GL ++P HS P++HN AF + +Y+ PM + E RT+
Sbjct: 2 ISGQTKLAGLFADPASHSLSPLMHNTAFEANNIDAVYLAFKVNPMNLKQAVESIRTF--- 58
Query: 288 DFAGFSVGIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIED 347
D G ++ +P+K + DEV A+ IGAVNTI+ G+L+GYNTD + ++++
Sbjct: 59 DMLGVNLSMPNKTAVIPYLDEVSQEAQLIGAVNTIVHEK--GRLIGYNTDGAGFMQSVQE 116
Query: 348 ALRERQGINGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGARVII-FNRN---YERA 403
A GI+ I K L+GAGGA +A+ A GA I+ + RN + +
Sbjct: 117 A-----GIS--------IKKKKMTLLGAGGAAKAVTVQAALDGAEEIVAYKRNNQTFAQV 163
Query: 404 KALADAVSG------EALHFEYLHEFFPE--KGMILANASAIGMEPNSDQSPVPKEALKA 455
K + +S + F H+ + + +L NA+ IGM +QSP+ ++
Sbjct: 164 KETFEQLSYRTSCKIKVRDFADTHQLRKDLKESCLLVNATDIGMGKKINQSPLLDISMMH 223
Query: 456 YEL-VFDAVYTPRNTRLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRKL 513
L VFD +Y PR TRLL+EA +VGA +G+ M I Q F L+T P + KL
Sbjct: 224 ENLAVFDLIYAPRETRLLKEAKKVGAKGYNGLGMLIYQGAIAFELWTKEKMPIHVIEKL 282
>gi|254424583|ref|ZP_05038301.1| shikimate 5-dehydrogenase [Synechococcus sp. PCC 7335]
gi|196192072|gb|EDX87036.1| shikimate 5-dehydrogenase [Synechococcus sp. PCC 7335]
Length = 303
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 89/308 (28%), Positives = 152/308 (49%), Gaps = 40/308 (12%)
Query: 237 TKIFGLVSNPVGHSKGPILHNPAFRHTRFNG----IYVPMLV--DDVKEFFRTYSGTDFA 290
T++ G++ P+ HS P++HN A H R G +Y+P V +++K+ +
Sbjct: 7 TQLLGVIGYPIKHSFSPLMHNAAIAHLRETGPADYVYLPFPVHPENLKDAIIGFKAIGLR 66
Query: 291 GFSVGIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPID--------GKLVGYNTDCESAI 342
GF++ IPHK+ + DEV +AK+IGAVNT+ + G NTD +
Sbjct: 67 GFNITIPHKQTIIPLLDEVSEVAKAIGAVNTVWYGTWNKGDDSSQESGWCGTNTDAIGFL 126
Query: 343 SAIEDALRERQGINGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGA-RVIIFNRNYE 401
S ++ AL++ ++T I ++G GGA RA+ G R+ + RN E
Sbjct: 127 SPLQ-ALKQDW------TNTRAI------VLGNGGASRAVVAACHQLGCKRISVVGRNLE 173
Query: 402 RAKALADAVSG--------EALHFEYLHEFFPEKGMILANASAIGMEPNSDQSPVPKEAL 453
+ A++ + + + +E L + G+++ NA+ +GM PN+D S + + L
Sbjct: 174 KLAWFAESWANSPDIAARLKVMTWEELPDQLQRAGLVV-NATPVGMHPNTDASVLSDDEL 232
Query: 454 KAY---ELVFDAVYTPRNTRLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFM 510
+ +D +YTPR T+ LR+AA G T V G+EM ++Q ++ AP D M
Sbjct: 233 ALLPTGAIAYDLIYTPRPTKFLRQAAAAGLTTVDGLEMLVQQGAAALEIWLDRPAPIDIM 292
Query: 511 RKLVLEQF 518
R+ +L+
Sbjct: 293 RRSLLDHL 300
>gi|145577913|gb|ABP82675.1| shikimate 5-dehydrogenase [Bacillus thuringiensis serovar
seoulensis]
Length = 237
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 87/251 (34%), Positives = 132/251 (52%), Gaps = 25/251 (9%)
Query: 250 SKGPILHNPAFRHTRFNGIYVPMLVDD-VKEFFRTYSGTDFAGFSVGIPHKEPAVACCDE 308
S P++HN AF H + Y LV++ + E R +GF+V PHK + DE
Sbjct: 1 SLSPVMHNDAFEHLNMDAHYHAFLVEEGLGEAVRGLKALGISGFNVTTPHKVAIMDYLDE 60
Query: 309 VHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALRERQGINGVASHTSPIAGK 368
+ PLA+ IGAVNT++ + DGKL+GYNTD + A++ E P+ K
Sbjct: 61 IDPLARQIGAVNTVVHK--DGKLIGYNTDGIGFVRALQSISSE------------PLQEK 106
Query: 369 IFVLVGAGGAGRALAFGAKSRGARVI-IFNRNYERAKALADAVSGE----ALHFEYLHEF 423
+L+GAGGA RA+ F G + I + NR ++AK L A + + AL E E
Sbjct: 107 RILLLGAGGASRAIYFSLADVGVKEIDVANRTVDKAKELIAACAADVHSVALSLEKATE- 165
Query: 424 FPEKGM--ILANASAIGMEPNSDQSPVPKEALKAYELVFDAVYTPRNTRLLREAAEVGAT 481
E+G I+ + GM P+ + +P+ +LK +V D +Y P T++L EA E GA
Sbjct: 166 --EQGNYDIIIQTTTRGMHPHVEHTPLQTCSLKEGTIVSDIIYNPFETKILCEAKEQGAI 223
Query: 482 VVSGVEMFIRQ 492
+ +G++MF+ Q
Sbjct: 224 IQNGIDMFVYQ 234
>gi|145577927|gb|ABP82682.1| shikimate 5-dehydrogenase [Bacillus thuringiensis serovar
oswaldocruzi]
Length = 238
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 89/252 (35%), Positives = 130/252 (51%), Gaps = 26/252 (10%)
Query: 250 SKGPILHNPAFRHTRFNGIYVPMLVDD--VKEFFRTYSGTDFAGFSVGIPHKEPAVACCD 307
S P++HN AF H + Y LV + + E R +GF+V PHK + D
Sbjct: 1 SLSPVMHNDAFEHLNMDAHYHAFLVKEEVLGEAVRGLKALGISGFNVTTPHKVAIMDYLD 60
Query: 308 EVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALRERQGINGVASHTSPIAG 367
E+ PLAK IGAVNT++ + DGKL+GYNTD + A++ E P+
Sbjct: 61 EIDPLAKQIGAVNTVVHK--DGKLIGYNTDGIGFVRALQFISSE------------PLQE 106
Query: 368 KIFVLVGAGGAGRALAFGAKSRGARVI-IFNRNYERAKALADA----VSGEALHFEYLHE 422
K +L+GAGGA RA+ F G + I + NR ++AK L A V AL E +
Sbjct: 107 KRILLLGAGGASRAIYFSLADAGVKEIDVANRTVDKAKELIAACTATVHSVALSLE---K 163
Query: 423 FFPEKGM--ILANASAIGMEPNSDQSPVPKEALKAYELVFDAVYTPRNTRLLREAAEVGA 480
E+G I+ + IGM P + +P+ +LK +V D +Y P T++L EA E GA
Sbjct: 164 ATKEQGNYDIIIQTTTIGMHPCVEHTPLQISSLKKGTIVSDIIYNPFETKILCEAKEQGA 223
Query: 481 TVVSGVEMFIRQ 492
+ +G++MF+ Q
Sbjct: 224 IIQNGIDMFVYQ 235
>gi|302390016|ref|YP_003825837.1| shikimate 5-dehydrogenase [Thermosediminibacter oceani DSM 16646]
gi|302200644|gb|ADL08214.1| shikimate 5-dehydrogenase [Thermosediminibacter oceani DSM 16646]
Length = 288
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 100/299 (33%), Positives = 152/299 (50%), Gaps = 27/299 (9%)
Query: 232 HINPDTKIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLV--DDVKEFFRTYSGTDF 289
I DTK+ G++ PV HS P++HN AF + + +YVP V +++KE +
Sbjct: 2 EIKGDTKVLGIIGYPVDHSLSPVIHNAAFEELKLSCVYVPFPVKPENLKEAIEGIRALNV 61
Query: 290 AGFSVGIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDAL 349
G +V IPHK + DE+ A IGAVNTI+ + G+LVG+NTD S +DAL
Sbjct: 62 GGVNVTIPHKVKVMNYLDEISKEAAVIGAVNTIVNK--GGRLVGFNTDA----SGFKDAL 115
Query: 350 RERQGINGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGA-RVIIFNRNYERAKAL-- 406
G++ + GK +++GAGGA RA+ GA +I+ NR RAK L
Sbjct: 116 YRIAGVD--------LTGKRVLVLGAGGAARAVVGQCLLSGASSIIVSNRTKTRAKELEF 167
Query: 407 --ADAVSGEALH-FEYLHEFF---PEKGMILANASAIGMEPNSD-QSPVPKEALKAYELV 459
A G + E+ + + + I+AN + G + + + +P + L +
Sbjct: 168 HFKKAGMGSKISIIEWGKQPWRRVASRVDIIANTAGAGQKDDLGLELEIPWDDLDKNTVF 227
Query: 460 FDAVYTPRNTRLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRKLVLEQF 518
FDAVY +TRLL+EA G V G M + Q + F+L+TG AP + M + L++F
Sbjct: 228 FDAVYGSGSTRLLKEAQSRGHLTVPGKYMLLYQGVEAFKLWTGLDAPLEVM-EAALDRF 285
>gi|428780823|ref|YP_007172609.1| shikimate 5-dehydrogenase [Dactylococcopsis salina PCC 8305]
gi|428695102|gb|AFZ51252.1| shikimate 5-dehydrogenase [Dactylococcopsis salina PCC 8305]
Length = 325
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 89/293 (30%), Positives = 140/293 (47%), Gaps = 28/293 (9%)
Query: 233 INPDTKIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLVD--DVKEFFRTYSGTDFA 290
I TK+ G++ +PV HS P++ N A + +YVP+ V D+ ++ D
Sbjct: 24 ITGKTKLLGVIGDPVEHSLSPVMQNAALNELGLDYVYVPLPVKKGDLNRALAGFTAIDLV 83
Query: 291 GFSVGIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALR 350
GF+ IPHK+ + D + P A+ +GAVNT+ R + G NTD + I+ + R
Sbjct: 84 GFNATIPHKQAIIPLLDRITPEAQKVGAVNTVWRT--EKGWEGTNTDVDGFIAPLIPLDR 141
Query: 351 ERQGINGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRG-ARVIIFNRNYERAKALADA 409
+ S P V++G GGA RA+ G + G ++V + RN E+ + +
Sbjct: 142 DW-------SQVMP------VILGNGGAARAVIVGCEKLGCSKVAVVGRNREKLEQFQRS 188
Query: 410 VSGEALHFE---YLHEFFPE---KGMILANASAIGMEPNSDQSPVPKEALKAYE---LVF 460
L E Y + P + +L N + IGM P + SPV ALK +V+
Sbjct: 189 WEETGLKTEICPYSWQDLPNLLSQTQLLVNTTPIGMSPQIESSPVEATALKHLPNGAIVY 248
Query: 461 DAVYTPRNTRLLREAAEVGA-TVVSGVEMFIRQALGQFRLFTGGLAPEDFMRK 512
D +YTPR TR L+ A ++G T + G+EM I+Q + P + MR+
Sbjct: 249 DLIYTPRPTRFLQLAQQLGEYTTIDGLEMLIQQGAIALETWLEQPIPIEVMRE 301
>gi|261402316|ref|YP_003246540.1| shikimate 5-dehydrogenase [Methanocaldococcus vulcanius M7]
gi|261369309|gb|ACX72058.1| shikimate 5-dehydrogenase [Methanocaldococcus vulcanius M7]
Length = 283
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 97/294 (32%), Positives = 150/294 (51%), Gaps = 27/294 (9%)
Query: 233 INPDTKIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVP--MLVDDVKEFFRTYSGTDFA 290
IN TK+ GL+ +PV HS PI+HN AF+ + N +YV +L + + + +
Sbjct: 2 INAKTKVVGLIGHPVEHSFSPIMHNTAFKDKKLNYVYVAFDVLPEHLGDAIKGAKSLGIV 61
Query: 291 GFSVGIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALR 350
GF++ IPHK + DE+ AK IGAVNT+ + +GK +GYNTD A A+E+ +
Sbjct: 62 GFNITIPHKIEVMKYLDEIDKDAKLIGAVNTV--KIDNGKAIGYNTDGIGARRALEEEIG 119
Query: 351 ERQGINGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGARVIIFNRNYERAKALADAV 410
E +G N ++V G ++ R+II NR E+AK LA +
Sbjct: 120 EVKGKN--------------IVVYGAGGAGRAVAFELAKNNRIIIANRTIEKAKNLAKEI 165
Query: 411 S-------GEALHFEYLHEFFPEKGMILANASAIGMEPNSDQSPVPK-EALKAYELVFDA 462
+ GE + F L+ + +++ NA+ IGM PN D P+ K + L+ +V D
Sbjct: 166 AEKLNKKFGEEVKFSDLNVDLSDVDIVI-NATPIGMYPNVDVEPIVKADKLREDMVVMDL 224
Query: 463 VYTPRNTRLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRKLVLE 516
VY P T LL+EA + A ++G+ M I Q F+++TG + MR + E
Sbjct: 225 VYNPLETVLLKEAKKANAKAINGLGMLIHQGAVAFKIWTGVEPNVEVMRNAIKE 278
>gi|225850624|ref|YP_002730858.1| shikimate 5-dehydrogenase [Persephonella marina EX-H1]
gi|225646318|gb|ACO04504.1| shikimate 5-dehydrogenase [Persephonella marina EX-H1]
Length = 281
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 87/291 (29%), Positives = 142/291 (48%), Gaps = 29/291 (9%)
Query: 233 INPDTKIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLV--DDVKEFFRTYSGTDFA 290
IN +T+++G+ PV HSK P+ N AF + N +Y+P V +D+K
Sbjct: 5 INGETEVYGIFGYPVKHSKSPLFQNAAFSYLGINAVYLPFSVKPEDLKNAVEGIRALSIK 64
Query: 291 GFSVGIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALR 350
G ++ +PHKE + +E+ K IGA NTI + IDG L+ YNTD I +++ +
Sbjct: 65 GVNITVPHKEEVLKLVNEISEEVKYIGASNTI--KNIDGYLIAYNTDAYGFIQGLKELVE 122
Query: 351 ERQGINGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGA-RVIIFNRNYERAKALADA 409
I+GK +++GAGGA RA+ +G GA ++ I NR +RA+ +
Sbjct: 123 N-------------ISGKKVLVIGAGGASRAVVYGLIKEGAEKIYISNRTLKRAEDIIRD 169
Query: 410 VSGEALHFEYLHEFFPEKGM--------ILANASAIGMEPNSDQSPVPKEALKAYELVFD 461
S + E + E P + I+ N +++G+ + D+ ++ +V D
Sbjct: 170 FSKLSRFTEKILEPLPLSQIEELLCNVDIIVNTTSVGLR-DEDRPLFDYSKIEKRHIVVD 228
Query: 462 AVYTPRNTRLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRK 512
+Y R T LL+ A E G G+ M + Q F ++TG AP + M+K
Sbjct: 229 IIY--RKTPLLKAAEEKGCLWQDGLPMLLYQGARSFEIWTGKKAPINIMKK 277
>gi|336114442|ref|YP_004569209.1| shikimate 5-dehydrogenase [Bacillus coagulans 2-6]
gi|335367872|gb|AEH53823.1| shikimate 5-dehydrogenase [Bacillus coagulans 2-6]
Length = 280
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 91/283 (32%), Positives = 143/283 (50%), Gaps = 22/283 (7%)
Query: 239 IFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLV--DDVKEFFRTYSGTDFAGFSVGI 296
++G++ +P+ HS P +HN AFR + Y V ++++ AGF+V I
Sbjct: 4 LYGVIGDPIAHSLSPAMHNEAFRALGLDADYHAFHVTPENLEAAVNGMKAIGVAGFNVTI 63
Query: 297 PHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALRERQGIN 356
PHK+ + D++ PLA++IGAVNT+IR P VGYNTD + A L+E G
Sbjct: 64 PHKQAIMPYLDDIDPLAETIGAVNTVIRTP--HGWVGYNTDGPGFMQA----LKEESG-- 115
Query: 357 GVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGARVI-IFNRNYERAKALAD----AVS 411
++G+ +++GAGGA RA+ + GA + + NR ++A+ + D
Sbjct: 116 ------RVLSGEKVLVIGAGGAARAIYYTLCREGAVTVDLCNRTVKKAEEMRDESPFPCP 169
Query: 412 GEALHFEYLHEFFPEKGMILANASAIGMEPNSDQSPVPKEALKAYELVFDAVYTPRNTRL 471
+ L + E +I+ S IGM P++D P+ LK V D +Y P T+
Sbjct: 170 SKVLTLKEAEEQLGNYTLIVQTTS-IGMHPDTDAQPLSLRHLKPGAFVSDIIYNPFETKF 228
Query: 472 LREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRKLV 514
L+EA + GA V +G+ MFI Q F +TG M+K+V
Sbjct: 229 LKEAKKRGARVQNGLGMFIYQGAIAFEKWTGVKPDTGKMKKIV 271
>gi|83814489|ref|YP_446381.1| shikimate 5-dehydrogenase [Salinibacter ruber DSM 13855]
gi|294508318|ref|YP_003572376.1| shikimate 5-dehydrogenase [Salinibacter ruber M8]
gi|123528180|sp|Q2S0A0.1|AROE_SALRD RecName: Full=Shikimate dehydrogenase
gi|83755883|gb|ABC43996.1| shikimate 5-dehydrogenase [Salinibacter ruber DSM 13855]
gi|294344646|emb|CBH25424.1| shikimate 5-dehydrogenase [Salinibacter ruber M8]
Length = 285
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 96/281 (34%), Positives = 141/281 (50%), Gaps = 26/281 (9%)
Query: 233 INPDTKIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYV--PMLVDDVKEFFRTYSGTDFA 290
++ T++ L+ +PV HS P +HN AFR N YV P+ + + + F
Sbjct: 3 LDATTQLVTLLGHPVEHSLSPRIHNTAFRAQDVNAAYVATPVRPEALGDAVAGLRALQFL 62
Query: 291 GFSVGIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALR 350
G +V PHKE + DEV A+++GAVNTI+R G+L G NTD + +E
Sbjct: 63 GANVTTPHKEAVLPVLDEVTERARAVGAVNTIVRD--GGRLHGDNTDIAGFLRPLE---- 116
Query: 351 ERQGINGVASHTSPIAGKIFVLVGAGGAGRALAFGAKS--RGARVIIFNRNYERAKALAD 408
ER G + G ++ GAGGA RA+ +G S R R+ I R ++A+ LA
Sbjct: 117 ERGG--------DALEGAPMLVFGAGGAARAVVYGLLSHYRPERLTIVARRPDQAEGLAA 168
Query: 409 AVSGE----ALHFEYLHE--FFPEKGMILANASAIGMEPNS-DQSPVPKEA-LKAYELVF 460
++ AL E ++ NA+ +GM P+ Q+P P A +V+
Sbjct: 169 DLAAHDPDGALRVSSFEEAALSVRTSRLVVNATPLGMAPDRRGQTPWPNPVDFTADHVVY 228
Query: 461 DAVYTPRNTRLLREAAEVGATVVSGVEMFIRQALGQFRLFT 501
D VYTP TRLLREAA GAT + G++M + QA +R +T
Sbjct: 229 DLVYTPEETRLLREAAAEGATPIGGLDMLVEQAAAAYRQWT 269
>gi|390935057|ref|YP_006392562.1| shikimate dehydrogenase [Thermoanaerobacterium saccharolyticum
JW/SL-YS485]
gi|389570558|gb|AFK86963.1| Shikimate dehydrogenase [Thermoanaerobacterium saccharolyticum
JW/SL-YS485]
Length = 283
Score = 132 bits (333), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 97/293 (33%), Positives = 155/293 (52%), Gaps = 30/293 (10%)
Query: 233 INPDTKIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLV--DDVKEFFRTYSGTDFA 290
IN T IFG++ +P+GHS P++HN AF + FN +YV V +D+K+
Sbjct: 3 INSKTGIFGIIGHPIGHSLSPLIHNNAFENLDFNSVYVSFDVKQEDLKDAIMGVKALGIK 62
Query: 291 GFSVGIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALR 350
G +V +PHKE + D + AK IGAVNTI R G L GYNTD ++ ++L+
Sbjct: 63 GLNVTVPHKESVIKYLDRISDEAKLIGAVNTI--RNNAGLLEGYNTD----VTGFMESLK 116
Query: 351 ERQGINGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGARVI-IFNRNYERAKALADA 409
E H + GK V++GAGGA +A+A G GA+ I + NR+ ++A L+
Sbjct: 117 E---------HNVDVEGKNAVILGAGGAAKAVATGLALLGAKSIYVCNRSIDKANELSIH 167
Query: 410 VSGE------ALHFEYLHEFFPEKGMILANASAIGMEPNSDQSPVPKEALKAYELVFDAV 463
+ + + L+ E M L NA+++GM PN D SP+ ++ + + V+D +
Sbjct: 168 IENNFNIKSRGIAYNDLN-MLDEIDM-LINATSVGMHPNVDVSPIEEDVVAKAKFVYDII 225
Query: 464 YTPRNTRLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRKLVLE 516
Y P T L A + ++G++M + QA F+++TG +F +K++L
Sbjct: 226 YNPEKTLFLSYAEKYQIRYINGLDMLVNQANDSFKIWTG----VNFDKKIILN 274
>gi|383762257|ref|YP_005441239.1| shikimate 5-dehydrogenase [Caldilinea aerophila DSM 14535 = NBRC
104270]
gi|381382525|dbj|BAL99341.1| shikimate 5-dehydrogenase [Caldilinea aerophila DSM 14535 = NBRC
104270]
Length = 464
Score = 132 bits (333), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 92/299 (30%), Positives = 143/299 (47%), Gaps = 27/299 (9%)
Query: 233 INPDTKIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLVDD-----VKEFFRTYSGT 287
I+ T + GL+ PV HS P +HN AF + YVP+ V+ V + R
Sbjct: 9 ISAKTTLVGLIGWPVSHSVSPAMHNAAFAALGMDWRYVPLPVNPALPGAVGDAVRGMRAM 68
Query: 288 DFAGFSVGIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIED 347
G +V +PHK+ + D + P A+++ AVNT+I DG L G NTD I+ +
Sbjct: 69 GMRGINVTVPHKQAVLPFLDHIAPAAQAMRAVNTVIVE-ADGSLTGDNTDAPGFIADLR- 126
Query: 348 ALRERQGINGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGA-RVIIFNRNYERAKAL 406
SH AG+ +++GAGG+ RA+ +G G R+ + NR ERA L
Sbjct: 127 ------------SHGVDPAGEHALVLGAGGSARAVVYGLAQAGVQRITVANRRIERAHQL 174
Query: 407 ADAVSGEALHFEYLHEFFPE------KGMILANASAIGMEPNSDQSPVPKE-ALKAYELV 459
+ + P+ ++ N +++GM P+ + +P P+E L+ + V
Sbjct: 175 LEDLRPYLGAIPCAAVALPDGLVEVADAPLIVNCTSLGMTPHVETTPWPRELPLRPGQTV 234
Query: 460 FDAVYTPRNTRLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRKLVLEQF 518
+D VY P +T LL++A + GA + G+ M I Q F +TG AP + MR EQ
Sbjct: 235 YDLVYNPPDTLLLQQARQQGARAIGGLGMLIWQGALAFERWTGRPAPVEVMRAAAEEQM 293
>gi|260892556|ref|YP_003238653.1| shikimate 5-dehydrogenase [Ammonifex degensii KC4]
gi|260864697|gb|ACX51803.1| shikimate 5-dehydrogenase [Ammonifex degensii KC4]
Length = 297
Score = 132 bits (333), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 97/298 (32%), Positives = 147/298 (49%), Gaps = 27/298 (9%)
Query: 232 HINPDTKIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLV--DDVKEFFRTYSGTDF 289
I+ +T+I G+ +P+ H+ P +HN AFR N IYVP V +++ E +
Sbjct: 2 QIDGNTRIVGIFGDPIAHTLSPHMHNAAFRALNLNYIYVPFWVRREELAEATAAIRALNL 61
Query: 290 AGFSVGIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDAL 349
AG +V +PHKE + DE+ A IGAVNT++ + GKL G NTD ++A+++
Sbjct: 62 AGVNVTVPHKEAIIPYLDELEEEACLIGAVNTVVNQ--GGKLWGSNTDASGFLAALQE-- 117
Query: 350 RERQGINGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGARVIIFNRNYERAKALA-- 407
+G +P K+ VL G A A+S+ + FNR ++RA LA
Sbjct: 118 ---EGF-------APAKKKVAVLGAGGAARAVGVALARSQVEEITFFNRTFDRAAELAAY 167
Query: 408 ----DAVSGEALHFEYLHEF----FPEKGMILANASAIGMEPNS-DQSPVPKEALKAYEL 458
V AL +E + F F + ++ +++GM P + PV +EA + +L
Sbjct: 168 LEERTGVRARALPWEEMGSFRGIEFLQAADLIVQTTSLGMHPREGEMPPVAEEAFRPGQL 227
Query: 459 VFDAVYTPRNTRLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRKLVLE 516
V D VY P TR L A + GA SG+ M + Q F L+TG AP + MR + E
Sbjct: 228 VIDLVYRPLKTRFLSLAQKRGAKTASGLGMLLYQGALAFSLWTGVPAPLEVMRAALEE 285
>gi|354594119|ref|ZP_09012162.1| shikimate dehydrogenase [Commensalibacter intestini A911]
gi|353673230|gb|EHD14926.1| shikimate dehydrogenase [Commensalibacter intestini A911]
Length = 279
Score = 132 bits (332), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 90/277 (32%), Positives = 141/277 (50%), Gaps = 24/277 (8%)
Query: 230 LEHINPDTKIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLV--DDVKEFFRTYSGT 287
++ I KI ++ P+ HS+ P+LHN + + +G Y+P+ V +D K +
Sbjct: 1 MQLITGKAKIAAVLGWPIEHSRSPLLHNFWLQRHQIDGAYIPLAVKAEDFKNVIQGMKAA 60
Query: 288 DFAGFSVGIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIED 347
F G +V IPHKE A CCD V AK +G+VNT+ DGK+ G +TD + ++ ++D
Sbjct: 61 GFKGCNVTIPHKEAAYQCCDIVDETAKKMGSVNTLWFTE-DGKIHGTSTDGDGFVANLKD 119
Query: 348 ALRERQGINGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGARVIIFNRNYERAKALA 407
A + K +++GAGGA R++A+ GA++ I NR +RA+ L
Sbjct: 120 A-------------DVTLTDKKVLILGAGGAARSVAYSLIQDGAQITITNRTLQRAEQLV 166
Query: 408 -DAVSGEALHFEYLHEFFPEKGM--ILANASAIGMEPNSDQSPVPKEALKAYELVFDAVY 464
D +G+ + ++ + E G +L N +++GME D + A K +V D VY
Sbjct: 167 RDLGAGQIIEWQ---SWIKELGQFDVLVNTTSLGMEGKDDYLFDLQHASKDL-VVTDIVY 222
Query: 465 TPRNTRLLREAAEVGATVVSGVEMFIRQA-LGQFRLF 500
PR T LL A G V G+ M + QA LG + F
Sbjct: 223 VPRITPLLEAAELKGLKTVEGLGMLLHQARLGFSKWF 259
>gi|145577919|gb|ABP82678.1| shikimate 5-dehydrogenase [Bacillus thuringiensis serovar
wratislaviensis]
gi|145577933|gb|ABP82685.1| shikimate 5-dehydrogenase [Bacillus thuringiensis serovar
shandongiensis]
Length = 237
Score = 132 bits (332), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 87/251 (34%), Positives = 132/251 (52%), Gaps = 25/251 (9%)
Query: 250 SKGPILHNPAFRHTRFNGIYVPMLVDD-VKEFFRTYSGTDFAGFSVGIPHKEPAVACCDE 308
S P++HN AF H + Y LV++ + E R +GF+V PHK + DE
Sbjct: 1 SLSPVMHNDAFEHLNMDAHYHAFLVEEGLGEAVRGLKALGISGFNVTTPHKVAIMDYLDE 60
Query: 309 VHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALRERQGINGVASHTSPIAGK 368
+ PLA+ IGAVNT++ + DGKL+GYNTD + A++ E P+ K
Sbjct: 61 IDPLARQIGAVNTVVHK--DGKLIGYNTDGIGFVRALQSISSE------------PLQEK 106
Query: 369 IFVLVGAGGAGRALAFGAKSRGARVI-IFNRNYERAKALADAVSGE----ALHFEYLHEF 423
+L+GAGGA RA+ F G + I + NR ++AK L A + + AL E E
Sbjct: 107 RILLLGAGGASRAIYFSLADVGVKEIDVANRTVDKAKELIAACAADVHSVALSLEKATE- 165
Query: 424 FPEKGM--ILANASAIGMEPNSDQSPVPKEALKAYELVFDAVYTPRNTRLLREAAEVGAT 481
E+G I+ + GM P+ + +P+ +LK +V D +Y P T++L EA E GA
Sbjct: 166 --EQGNYDIIIQTTTRGMHPHVEHTPLQICSLKEGTIVSDIIYNPFETKILCEAKEQGAI 223
Query: 482 VVSGVEMFIRQ 492
+ +G++MF+ Q
Sbjct: 224 IQNGIDMFVYQ 234
>gi|289191666|ref|YP_003457607.1| shikimate 5-dehydrogenase [Methanocaldococcus sp. FS406-22]
gi|288938116|gb|ADC68871.1| shikimate 5-dehydrogenase [Methanocaldococcus sp. FS406-22]
Length = 284
Score = 132 bits (332), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 105/296 (35%), Positives = 155/296 (52%), Gaps = 27/296 (9%)
Query: 233 INPDTKIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVP--MLVDDVKEFFRTYSGTDFA 290
I+ TK+ GL+ +PV HS PI+HN AF+ N +YV +L +++K
Sbjct: 2 IDAKTKVIGLIGHPVEHSFSPIMHNAAFKDKGLNYVYVAFDVLPENLKYVIDGAKALGIV 61
Query: 291 GFSVGIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALR 350
GF+V IPHK + DE+ A+ IGAVNTI + DGK +GYNTD A A+E+ +
Sbjct: 62 GFNVTIPHKIEIMKYLDEIDKDAQLIGAVNTI--KIEDGKAIGYNTDGIGARMALEEEI- 118
Query: 351 ERQGINGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGARVIIFNRNYERAKALADAV 410
+ K V+ GAGGA RA+AF ++ VII NR E+A+ALA +
Sbjct: 119 ------------GKVKDKNIVIFGAGGAARAVAFEL-AKDNNVIIANRTVEKAEALAKEI 165
Query: 411 S-------GEALHFEYLHEFFPEKGMILANASAIGMEPNSDQSPVPK-EALKAYELVFDA 462
S GE + F L + + NA+ IGM PN D P+ K E L+ +V D
Sbjct: 166 SEKLNKKFGEEVKFSGLDIDLDGIDI-IINATPIGMYPNVDVEPIVKAEKLREDMVVMDL 224
Query: 463 VYTPRNTRLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRKLVLEQF 518
+Y P T LL+EA +V A ++G+ M I Q F+++TG + M+ ++++
Sbjct: 225 IYNPLETVLLKEAKKVNAKTINGLGMLIYQGAVAFKIWTGVEPNIEVMKNAIIDKI 280
>gi|374322326|ref|YP_005075455.1| shikimate dehydrogenase [Paenibacillus terrae HPL-003]
gi|357201335|gb|AET59232.1| shikimate dehydrogenase [Paenibacillus terrae HPL-003]
Length = 296
Score = 132 bits (332), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 91/299 (30%), Positives = 145/299 (48%), Gaps = 33/299 (11%)
Query: 232 HINPDTKIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLV--DDVKEFFRTYSGTDF 289
I+ T++ GL++ P+GHS P +HN AF N Y+ V + ++E R +
Sbjct: 6 RIDGRTQLIGLLATPIGHSLSPAMHNLAFEKLGLNNAYMAFEVGNEQLEEVVRGMRALNV 65
Query: 290 AGFSVGIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDAL 349
G++V +P+K V DE+ AK GAVNT++ DGKL GY+TD + L
Sbjct: 66 RGYNVSMPNKTAIVQYLDELDDSAKFTGAVNTVVN--TDGKLKGYSTDGSGYVRN----L 119
Query: 350 RERQGINGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRG-ARVIIFNRN---YERAKA 405
RE H + GK LVG+GGA +A A G A + IF RN + RA+
Sbjct: 120 RE---------HGIDLTGKKMTLVGSGGAATPIAIEAARAGLAEISIFARNDQFFARAEE 170
Query: 406 LADAVSGEALHFEYLHEFFP-----------EKGMILANASAIGMEPNSDQSPVPK-EAL 453
++ + H + +P I AN + +GM+P +S + L
Sbjct: 171 NVRIINEDMKHTQVKANIYPLEDQEQLREEIRTSHIFANGTGVGMKPLEGKSVIEDVSML 230
Query: 454 KAYELVFDAVYTPRNTRLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRK 512
++ +V D VY+P ++L+ +A VGAT ++G+ M + Q F L+TG P ++++
Sbjct: 231 RSDLIVTDVVYSPAKSKLMEQAQSVGATAINGLGMMLWQGALAFELWTGQEMPVSYIKE 289
>gi|431071468|ref|ZP_19494439.1| shikimate 5-dehydrogenase [Enterococcus faecium E1604]
gi|431104340|ref|ZP_19497064.1| shikimate 5-dehydrogenase [Enterococcus faecium E1613]
gi|431582328|ref|ZP_19520277.1| shikimate 5-dehydrogenase [Enterococcus faecium E1861]
gi|431740200|ref|ZP_19529117.1| shikimate 5-dehydrogenase [Enterococcus faecium E2039]
gi|430567101|gb|ELB06187.1| shikimate 5-dehydrogenase [Enterococcus faecium E1604]
gi|430569928|gb|ELB08907.1| shikimate 5-dehydrogenase [Enterococcus faecium E1613]
gi|430594218|gb|ELB32188.1| shikimate 5-dehydrogenase [Enterococcus faecium E1861]
gi|430603736|gb|ELB41249.1| shikimate 5-dehydrogenase [Enterococcus faecium E2039]
Length = 284
Score = 132 bits (332), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 95/299 (31%), Positives = 149/299 (49%), Gaps = 36/299 (12%)
Query: 233 INPDTKIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYV-----PMLVDDVKEFFRTYSGT 287
I+ TK+ GL ++P HS P++HN AF + +Y+ PM + E RT+
Sbjct: 2 ISGKTKLAGLFADPASHSLSPLMHNTAFEANNIDAVYLAFKVNPMNLKQAVESIRTF--- 58
Query: 288 DFAGFSVGIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIED 347
D G ++ +P+K + DEV A+ IGAVNTI+ G+L+GYNTD + ++++
Sbjct: 59 DMLGVNLSMPNKTAVIPYLDEVSQEAQLIGAVNTIVHEK--GRLIGYNTDGAGFMQSVQE 116
Query: 348 ALRERQGINGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGAR-VIIFNRN---YERA 403
A GI+ + K L+GAGGA +A+ A GA+ ++++ RN + +
Sbjct: 117 A-----GIS--------VKKKKMTLLGAGGAAKAVTVQAALDGAKEIVVYKRNNQTFAQV 163
Query: 404 KALADAVSGEALHFEYLHEFFP--------EKGMILANASAIGMEPNSDQSPVPKEALKA 455
K + +S + +F ++ +L NA+ IGM DQSP+ +
Sbjct: 164 KETFEQLSYRTSCKVKVRDFADTDQLRKDLKESCLLVNATDIGMGKKIDQSPLLDINMMH 223
Query: 456 YEL-VFDAVYTPRNTRLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRKL 513
L VFD +Y PR TRLL+EA +VGA +G+ M I Q F L+ P + KL
Sbjct: 224 ENLAVFDLIYAPRETRLLKEAKKVGAKGYNGLGMLIYQGAIAFELWAKEKMPIHVIEKL 282
>gi|336366066|gb|EGN94414.1| hypothetical protein SERLA73DRAFT_114628 [Serpula lacrymans var.
lacrymans S7.3]
gi|336378738|gb|EGO19895.1| hypothetical protein SERLADRAFT_363753 [Serpula lacrymans var.
lacrymans S7.9]
Length = 1617
Score = 132 bits (332), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 130/484 (26%), Positives = 215/484 (44%), Gaps = 44/484 (9%)
Query: 61 TLPAIVSYRLKSSRKSSDEACKNTCLQVLRRALDLDVEFVEMDYEVAS-DPLMSEIIYSR 119
+LP + + R S S + + +L A+ + E++ D E++ + L+ +++ +
Sbjct: 1148 SLPIVFTVRTVSQGGSFPDKAEKEAFHLLNLAVRIGAEYI--DAEISWPEKLIKDLVSHK 1205
Query: 120 SNTKIIVSSYLNGGGKPTTEKLGDVIACMQATGADVMKLEIAVDSITDLAPVFEMLTHCQ 179
+++II S + G E + A D++K+ +S+ D +++ ++
Sbjct: 1206 GSSQIIASWHDWTGKMRWNEASVKAKYDIAARFGDIVKIVGKANSVQDNFALYDFVSRVS 1265
Query: 180 V-----PLIALAVGSRGLISQLLGPKFGGFLVYGSLGGKSVPGLPTLVSLKQVYQLEHIN 234
P+IA+ +G G +S++L F + + L K+ PG + ++Q L
Sbjct: 1266 SASNAKPIIAINMGVEGQMSRILNSTFSP-VSHPLLPTKAAPGQLSYAQIQQALHLLGQL 1324
Query: 235 PDTKIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLVDDVKEFFRT-YSGTDFAGFS 293
P + F + NP+ HS P LHN F Y + DV E + + DF G S
Sbjct: 1325 PAQRYF-IFGNPIAHSMSPTLHNTGFEVLGLPHTYQLLETTDVGEGIKAALASPDFGGAS 1383
Query: 294 VGIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGK-----LVGYNTDCESAISAIEDA 348
V IP K + D++ P A++IGAVNTI+ R D L G NTD I ++
Sbjct: 1384 VTIPFKLDVIPLLDQLSPAAEAIGAVNTIVPRLADASGTNRILYGDNTDW----LGIVES 1439
Query: 349 LRERQGINGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGAR-VIIFNRNYERAKALA 407
+R R G A + +++GAGG RA F K+ GA+ + ++NR +A+ L
Sbjct: 1440 VRSRAPALG--------APQAALVIGAGGTARAAIFALKALGAQHIYLYNRTAGKAQILV 1491
Query: 408 DAVSGEALHFEYLHEF--FPEKGM------ILANASAIGMEPNSDQS---PVPKEALKAY 456
DA H E + +P +G+ ASA E S + PV K
Sbjct: 1492 DAFPDA--HVELVERLGIWPGEGLVPSVVVSTVPASATTTEEGSADAVFLPVSIFDAKLE 1549
Query: 457 ELVFDAVYTPRNTRLLREAAEVGAT--VVSGVEMFIRQALGQFRLFTGGLAPEDFMRKLV 514
+V D Y P T LL A V V GVE+ + Q QF +TG P+ + + V
Sbjct: 1550 GVVVDMAYKPAETPLLALAKRVAPNWATVRGVEVLLEQGYVQFETWTGRRCPKHVVAERV 1609
Query: 515 LEQF 518
LE++
Sbjct: 1610 LEKY 1613
>gi|110596793|ref|ZP_01385083.1| shikimate 5-dehydrogenase [Chlorobium ferrooxidans DSM 13031]
gi|110341480|gb|EAT59940.1| shikimate 5-dehydrogenase [Chlorobium ferrooxidans DSM 13031]
Length = 290
Score = 132 bits (331), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 98/299 (32%), Positives = 154/299 (51%), Gaps = 38/299 (12%)
Query: 238 KIFGLVSNPVGHSKGPILHNPA-------FRHTRFNGIYVPMLVDDVKEFFRTYSGTDFA 290
KI GL+ V +S P++HN A + +T FN I P ++ D R A
Sbjct: 6 KILGLIGRAVDYSWSPLIHNTASELLDLPYCYTIFN-IADPEMIGDA---LRGAKALGIA 61
Query: 291 GFSVGIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALR 350
GF+V IP+K+ V DE+ A +IGAVNTII R DGK+ G+NTD E + ++
Sbjct: 62 GFNVTIPYKKTVVPFLDELSREAATIGAVNTIIIR--DGKMTGHNTDIEGFATPLK---- 115
Query: 351 ERQGINGVASHTSPIAGKIFVLVGAGGAGRAL--AFGAKSRGARVIIFNRNYERAKALAD 408
+ S I G + G GGA A AF +++++ R+ E+A A+ D
Sbjct: 116 ---------PYASLIEGNPVSVFGCGGAALAAIEAFRLFFSPRKIMVYARDPEKATAMLD 166
Query: 409 AVSGEALHFEYLHEFFPEKGM----ILANASAIGMEP-NSDQS----PVPKEALKAYELV 459
+ L H+ E+ + ++ NA+ IG + N+DQ+ P+ +E + ++V
Sbjct: 167 GYEYKEL-VTICHQRLVEEQLRSCAVMVNATPIGTKGGNNDQTESIVPLDRELIHKGQIV 225
Query: 460 FDAVYTPRNTRLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRKLVLEQF 518
+D VY P +T LL EA GAT +SG+EM I QA F L+TG P + ++K+++++
Sbjct: 226 YDMVYNPLDTPLLLEAKRKGATTISGIEMLIGQAALSFALWTGKAMPVEAVKKVIMQEI 284
>gi|20093378|ref|NP_619453.1| shikimate 5-dehydrogenase [Methanosarcina acetivorans C2A]
gi|24211500|sp|Q8THC3.1|AROE_METAC RecName: Full=Shikimate dehydrogenase
gi|19918745|gb|AAM07933.1| shikimate 5-dehydrogenase [Methanosarcina acetivorans C2A]
Length = 280
Score = 132 bits (331), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 107/292 (36%), Positives = 149/292 (51%), Gaps = 27/292 (9%)
Query: 238 KIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLV--DDVKEFFRTYSGTDFAGFSVG 295
++FG+ +PVGHS P +HN AF + IY V +++++ F G ++
Sbjct: 3 RVFGVFGDPVGHSLSPAMHNSAFSALGMDCIYHAFRVRPENLRKAILGAEAMGFGGLNLT 62
Query: 296 IPHKEPAVACCDEVHP--LAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALRERQ 353
+P KE A+ D + P LA+ IGAVNT++ G++ GYNTD A A+ +A E
Sbjct: 63 VPLKEEALKL-DFIRPDPLAERIGAVNTVVFSET-GEIRGYNTDGLGARQALLEAAVE-- 118
Query: 354 GINGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGARVIIFNRNYERAKALADAVSGE 413
I G V+ GAGGA RA+AF + GA + + NR ERA LA V+
Sbjct: 119 -----------IRGSKVVVAGAGGAARAVAFQLAADGAEITVVNRTEERAVELAKDVAAA 167
Query: 414 AL-------HFEYLHEFFPEKGMILANASAIGMEPNSDQSPVPKEALKAYELVFDAVYTP 466
+L L E + IL N + +GM PN+D + E L + VFD VY P
Sbjct: 168 SLPGKINGTGLSGLKELLRDAD-ILINTTTLGMHPNTDTTIATAEELHSGLTVFDIVYNP 226
Query: 467 RNTRLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRKLVLEQF 518
TRLL+EA GA VSGV M + Q F+L+TG AP + M+K VLE
Sbjct: 227 LETRLLKEAKVAGAKTVSGVLMLVYQGAEAFKLWTGVEAPAELMKKTVLEAL 278
>gi|268324616|emb|CBH38204.1| probable shikimate 5-dehydrogenase [uncultured archaeon]
Length = 272
Score = 132 bits (331), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 89/283 (31%), Positives = 142/283 (50%), Gaps = 25/283 (8%)
Query: 238 KIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLV--DDVKEFFRTYSGTDFAGFSVG 295
KI+G++ +P+ HS P++HN AF+ + +Y+ V +++ + R +G +V
Sbjct: 3 KIYGIIGDPIAHSLSPVMHNAAFKKLGLDAVYLAFRVTLEELGDAIRGAKSLGISGLNVT 62
Query: 296 IPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALRERQGI 355
IP KE A++ +AK IGA+NTI GYNTD A+ +E+ + E
Sbjct: 63 IPLKEKALSFV-ATEEVAKKIGALNTI---DFSSTPSGYNTDGIGALMVLEETVGE---- 114
Query: 356 NGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGARVIIFNRNYERAKALADAVSGE-- 413
I GK +++GAGGA RA++F + GA V + NR R+ LA +
Sbjct: 115 ---------IRGKNVLILGAGGAARAISFYLDASGAMVTLANRTEGRSAQLASNLRNANS 165
Query: 414 -ALHFEYLHEFFPEKGMILANASAIGMEPNSDQSPVPKEALKAYELVFDAVYTPRNTRLL 472
+L E ++ IL NA+++GM P D + + + + +VFD VY P T+LL
Sbjct: 166 ISLGAELKNQIGDSD--ILINATSVGMHPKEDATLITADLMHPDLVVFDIVYNPIETKLL 223
Query: 473 REAAEVGA-TVVSGVEMFIRQALGQFRLFTGGLAPEDFMRKLV 514
+EA G +V GV+M + Q F+L+T P + M V
Sbjct: 224 KEAKRAGVKKIVDGVKMLVYQGAASFKLWTKEDPPVEVMENAV 266
>gi|374635880|ref|ZP_09707469.1| shikimate 5-dehydrogenase [Methanotorris formicicus Mc-S-70]
gi|373560842|gb|EHP87092.1| shikimate 5-dehydrogenase [Methanotorris formicicus Mc-S-70]
Length = 282
Score = 132 bits (331), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 101/295 (34%), Positives = 152/295 (51%), Gaps = 26/295 (8%)
Query: 233 INPDTKIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVP--MLVDDVKEFFRTYSGTDFA 290
IN TK+ GL+ +PV HS PI+HN AFR N +Y+ +L ++++
Sbjct: 2 INAKTKLIGLLGHPVEHSFSPIMHNAAFRDKNLNYVYLAFDVLPENLRYVIDGAKAMGIV 61
Query: 291 GFSVGIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALR 350
GF+V IPHK + DE+ AK IGAVNTI + + K +GYNTD A A+E+ +
Sbjct: 62 GFNVTIPHKIEIMEYLDEIDENAKLIGAVNTI--KIENNKAIGYNTDGLGARMALEEEI- 118
Query: 351 ERQGINGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGARVIIFNRNYERAKALADAV 410
+ K ++ GAGGA RA+AF ++ +II NR E+AK+LA+ V
Sbjct: 119 ------------GKVVDKSIIIYGAGGAARAVAFEL-AKNNNIIIANRTIEKAKSLAEEV 165
Query: 411 ------SGEALHFEYLHEFFPEKGMILANASAIGMEPNSDQSPVPK-EALKAYELVFDAV 463
+ E + + L E +I+ NA+ IGM PN D P+ K E + +V D +
Sbjct: 166 REKLNKTEEEVKYSGLDASLDEIDIII-NATPIGMYPNVDVEPIVKAEEMHNDMVVMDLI 224
Query: 464 YTPRNTRLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRKLVLEQF 518
Y P T LL+EA +VGA ++G+ M I Q F ++T + M+ ++
Sbjct: 225 YNPLETVLLKEAKKVGAKTINGLGMLIYQGAIAFEIWTNEKPSIEVMKDAIINHL 279
>gi|385839698|ref|YP_005877445.1| shikimate 5-dehydrogenase [Lactobacillus salivarius CECT 5713]
gi|300215389|gb|ADJ79802.1| Shikimate 5-dehydrogenase [Lactobacillus salivarius CECT 5713]
Length = 291
Score = 132 bits (331), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 96/307 (31%), Positives = 155/307 (50%), Gaps = 37/307 (12%)
Query: 230 LEHINPDTKIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLVDDVK-----EFFRTY 284
+E I+ T + GL++ P+ HS P +HN AF N Y+ +D+ K + RT
Sbjct: 1 MERIDGHTLLIGLMAYPIRHSMSPTMHNNAFAKLGLNYAYLAFEIDNDKLEKAVDAIRTL 60
Query: 285 SGTDFAGFSVGIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISA 344
D G +V +P+K+ + D++ P AK GAVNT++ +G L GY TD + +
Sbjct: 61 ---DMRGSNVSMPNKQKIIPYLDKLDPAAKMAGAVNTVVND--NGVLTGYTTDGTGFMKS 115
Query: 345 IEDALRERQGINGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGARVI-IFNRN---Y 400
+ D +G++ I GK L GAGGAG +A A G + I IFN + +
Sbjct: 116 LAD-----EGLD--------IRGKKMTLAGAGGAGTPIAIQAALDGVKEISIFNLDDAQW 162
Query: 401 ERAKALADAVSGEA------LHFEYLHEFFPE--KGMILANASAIGMEPNSDQSPVPKEA 452
E+A+ + ++ E H E +F E I +A+ +GM+P D + V +
Sbjct: 163 EQAEKNVEIINRETDCKATLHHLEDKEDFKKEIASSYIYCDATGVGMKPLEDMTLVEDPS 222
Query: 453 LKAYEL-VFDAVYTPRNTRLLREAAEVGAT-VVSGVEMFIRQALGQFRLFTGGLAPEDFM 510
++ VFD VY PR T+L++ A E G V++G+ M + Q F+L+TG P D++
Sbjct: 223 WFHKDMIVFDTVYAPRETKLMKVAKEAGVDHVLNGLGMMLEQGAEAFKLWTGEDMPVDYI 282
Query: 511 RKLVLEQ 517
R+L+ +
Sbjct: 283 RELLFSE 289
>gi|448309820|ref|ZP_21499674.1| shikimate 5-dehydrogenase [Natronorubrum bangense JCM 10635]
gi|445589358|gb|ELY43593.1| shikimate 5-dehydrogenase [Natronorubrum bangense JCM 10635]
Length = 269
Score = 132 bits (331), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 112/286 (39%), Positives = 145/286 (50%), Gaps = 23/286 (8%)
Query: 238 KIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLVD--DVKEFFRTYSGTDFAGFSVG 295
+FGL+ NPVGHS P +H A+ YV + D++ G +V
Sbjct: 2 DVFGLLGNPVGHSLSPPMHEAAYDQLGLEARYVTFEPEPADLEAAIDGADALGITGLNVT 61
Query: 296 IPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALRERQGI 355
IP K+ + C E LA IGAVNTI G G+NTD A+ A+ D
Sbjct: 62 IPFKQDVLDCV-EADELAARIGAVNTIDFTG-SGTPTGHNTDAVGAMRALRD-------- 111
Query: 356 NGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGARVIIFNRNYERAKALADAV---SG 412
H + G V+VGAGGAGRA+AFG GA V I NR A LA+AV +G
Sbjct: 112 -----HDVTLEGADAVVVGAGGAGRAIAFGLADAGATVEIANRTEATAHDLAEAVPGATG 166
Query: 413 EALHFEYLHEFFPEKGMILANASAIGMEPNSDQSPVPKEALKAYELVFDAVYTPRNTRLL 472
L + L + E IL NA+++GME SD++PVP +AL V DAVY P TRLL
Sbjct: 167 HGLEADMLADLL-EDAEILVNATSVGME--SDETPVPADALHGELAVMDAVYQPLETRLL 223
Query: 473 REAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRKLVLEQF 518
R+AAEVGAT V G M + Q + F L+TG P + M + + Q
Sbjct: 224 RDAAEVGATTVDGAWMLLYQGVEAFELWTGDEPPVETMNEALRSQL 269
>gi|37522847|ref|NP_926224.1| shikimate 5-dehydrogenase [Gloeobacter violaceus PCC 7421]
gi|35213849|dbj|BAC91219.1| shikimate 5-dehydrogenase [Gloeobacter violaceus PCC 7421]
Length = 285
Score = 132 bits (331), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 97/290 (33%), Positives = 136/290 (46%), Gaps = 30/290 (10%)
Query: 233 INPDTKIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLV--DDVKEFFRTYSGTDFA 290
I T++ GL+ PVGHS P++HN A + +YVP+ V D+ + F
Sbjct: 7 IRGTTRLLGLLGYPVGHSLSPVMHNAALARLGLDLVYVPLPVAPADLPQAVAGLRRAGFV 66
Query: 291 GFSVGIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALR 350
GF+V IPHK+ V D + P AK GAVNT +R DG L G NTD E + IE
Sbjct: 67 GFNVTIPHKQAIVPLLDTLTPEAKGAGAVNT-VRVETDGSLTGTNTDIEGFMGPIE---- 121
Query: 351 ERQGINGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRG-ARVIIFNRNYERAKA---- 405
T P G +L G GG+ A+A G G R+ + R+ + A
Sbjct: 122 -----------TVPFQGAATIL-GCGGSALAVALGCAQLGFTRIHVVGRDPAKLAAFKSH 169
Query: 406 LADAVSGEALHFEYLHEFFPEKGMILANASAIGMEPNSDQSPVPKEALKAYEL---VFDA 462
L A + E +E L P G+++ N + +GM P ++ SP+ E L A L V+D
Sbjct: 170 LHPAATVEIDLWEQLESLLPGTGLLI-NTTPVGMIPATEASPL--EDLGALPLKACVYDL 226
Query: 463 VYTPRNTRLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRK 512
+Y PR TRLL+ A G+ M + QA F +TG P M +
Sbjct: 227 IYRPRPTRLLQLAVARSLQTFDGLGMLVGQAEAAFYFWTGCKPPTQLMLQ 276
>gi|410466400|ref|ZP_11319313.1| shikimate 5-dehydrogenase [Desulfovibrio magneticus str. Maddingley
MBC34]
gi|409980778|gb|EKO37456.1| shikimate 5-dehydrogenase [Desulfovibrio magneticus str. Maddingley
MBC34]
Length = 274
Score = 132 bits (331), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 95/283 (33%), Positives = 142/283 (50%), Gaps = 24/283 (8%)
Query: 238 KIFGLVSNPVGHSKGPILHNPAFRHTRFNGIY--VPMLVDDVKEFFRTYSGTDFAGFSVG 295
++FG++ +P+GH+ P++HN F + Y P +++ F T AG SV
Sbjct: 2 QLFGIIGHPLGHTLSPLVHNWGFSRYGLDARYEAWPTPPEELPAFMERLRQTPIAGVSVT 61
Query: 296 IPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISA-IEDALRERQG 354
IPHK +A DEV L ++ GAVNT+ R DG+L+G NTD E + + R+
Sbjct: 62 IPHKTAVMAFVDEVSELGQAAGAVNTLYWR--DGRLIGDNTDVEGFCRPLVMRGIAPRRA 119
Query: 355 INGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGARVIIFNRNYERAKALADAVSGEA 414
+ A + A + +G G + R +E+A+ALA A
Sbjct: 120 LVLGAGGAARAAVLGLTRLDSGVVG---------------VTARRFEQAQALAREFGVLA 164
Query: 415 LHFEYLHEFFPEKGMILANASAIGMEPNSDQ-SPVPKEALKAYELVFDAVYTPRNTRLLR 473
+ ++ F + L NA+ +GM + SP P +AL + FD VY P TRL
Sbjct: 165 VPWDERGAFGAD---FLTNATPMGMAGRFEGVSPYPAQALSPGMVAFDLVYNPYETRLAA 221
Query: 474 EAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRKLVLE 516
+AA G TVV G+EMF+ QA+ QFRL+TG L P+D +R L+L
Sbjct: 222 DAAAAGGTVVPGLEMFLYQAVEQFRLWTGRLLPDDELRPLLLR 264
>gi|145577959|gb|ABP82698.1| shikimate 5-dehydrogenase [Bacillus weihenstephanensis]
Length = 238
Score = 132 bits (331), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 86/250 (34%), Positives = 130/250 (52%), Gaps = 22/250 (8%)
Query: 250 SKGPILHNPAFRHTRFNGIYVPMLVDD--VKEFFRTYSGTDFAGFSVGIPHKEPAVACCD 307
S P++HN AF H + Y LV++ + E + +GF+V PHK + D
Sbjct: 1 SLSPVMHNDAFEHLNMDAHYHAFLVEEEALGEAVKGLKALGISGFNVTTPHKVAIMEYLD 60
Query: 308 EVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALRERQGINGVASHTSPIAG 367
EV PLA+ IGAVNT++ R DGKL+GYNTD + A++ + P+
Sbjct: 61 EVAPLARQIGAVNTVVHR--DGKLIGYNTDGIGFVRALQSISED------------PLQE 106
Query: 368 KIFVLVGAGGAGRALAFGAKSRGARVI-IFNRNYERAKALADA----VSGEALHFEYLHE 422
K +L+GAGGA RA+ F G + I I NR ++A+ L V+ AL E E
Sbjct: 107 KRILLIGAGGASRAIYFSLADVGVKEIDIANRTRDKAENLIAGCMANVNSHALSLECAAE 166
Query: 423 FFPEKGMILANASAIGMEPNSDQSPVPKEALKAYELVFDAVYTPRNTRLLREAAEVGATV 482
E +I+ + IGM P+ +P+ +LK +V D +Y P T++L +A E GA +
Sbjct: 167 NQGEYDIII-QTTTIGMHPHVAYTPLEIRSLKQGTIVSDIIYNPFETKILGDAKEQGAII 225
Query: 483 VSGVEMFIRQ 492
+G++MF+ Q
Sbjct: 226 QNGIDMFVYQ 235
>gi|310643105|ref|YP_003947863.1| shikimate 5-dehydrogenase [Paenibacillus polymyxa SC2]
gi|309248055|gb|ADO57622.1| Shikimate 5-dehydrogenase [Paenibacillus polymyxa SC2]
gi|392303905|emb|CCI70268.1| shikimate 5-dehydrogenase [Paenibacillus polymyxa M1]
Length = 289
Score = 132 bits (331), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 96/303 (31%), Positives = 143/303 (47%), Gaps = 40/303 (13%)
Query: 233 INPDTKIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLV--DDVKEFFRTYSGTDFA 290
I D + G++ +P+ HSK P++H A + +G +VP+ V D +++ + F
Sbjct: 9 IERDLVLLGVLGDPIKHSKSPLMHKIALQAAGVDGDFVPLHVTPDQLEDAVKGIRALHFR 68
Query: 291 GFSVGIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALR 350
G +V IPHK + DE+ A+ IGAVNTI+ +G+L GYNTD + + L+
Sbjct: 69 GVNVTIPHKVEIMKYLDEIDEGARLIGAVNTIVND--NGRLKGYNTDGIGYVRS----LK 122
Query: 351 ERQGINGVASHTSPIAGKIFVLVGAGGAGRALAFGA-KSRGARVIIFNRNYERAKALADA 409
E + + G ++GAGGA R + + + VII NR ++A+ LA
Sbjct: 123 EETSVE--------LKGARIAVLGAGGAARGVIHALLEEQPESVIILNRTRDKAEQLA-- 172
Query: 410 VSGEALHFEYLHEFFPEKGM-------------ILANASAIGMEPNSDQSPVPKEALKAY 456
E+ E P G +L N +++GM P SD+ PV +
Sbjct: 173 -------LEWTTEAIPVMGYSNEEARNVLTTVDVLINTTSVGMSPLSDELPVETSLIPEG 225
Query: 457 ELVFDAVYTPRNTRLLREAAEV-GATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRKLVL 515
+V D +Y P TRLLRE+ E G TV G+ MF+ Q F FTG D MR VL
Sbjct: 226 IIVSDLIYNPLETRLLRESREQRGCTVHGGLGMFVYQGAVAFEYFTGVAPAVDQMRAAVL 285
Query: 516 EQF 518
Sbjct: 286 RSL 288
>gi|434386886|ref|YP_007097497.1| shikimate 5-dehydrogenase [Chamaesiphon minutus PCC 6605]
gi|428017876|gb|AFY93970.1| shikimate 5-dehydrogenase [Chamaesiphon minutus PCC 6605]
Length = 298
Score = 132 bits (331), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 90/312 (28%), Positives = 143/312 (45%), Gaps = 39/312 (12%)
Query: 230 LEHINPDTKIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLVD--DVKEFFRTYSGT 287
+ I TK+ G++ NP+ H+ P++HN A + YV V ++ ++
Sbjct: 1 MPQITGTTKLLGVIGNPIAHTFSPVMHNAAIAALGLDYRYVAFDVTPANLATALAGFAAI 60
Query: 288 DFAGFSVGIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIED 347
G SV IPHK+ + ++ PLAK++GAVNTI P G NTD I+ ++
Sbjct: 61 GVVGCSVTIPHKQAVMPLLKDISPLAKAVGAVNTIWNAPEGWH--GTNTDIPGFIAPLKA 118
Query: 348 ALRERQGINGVASHTSPIAGKIFVLV-GAGGAGRALAFGAKSRGARVI-IFNRNYERAKA 405
R+ G+ L+ G GGA RA+ G G R I +F R+ + A
Sbjct: 119 MTRDW--------------GETTALILGNGGAARAVVAGCHQLGCRSIRVFGRDAAKLAA 164
Query: 406 LADAVSGEALH----------------FEYLHEFFPEKGMILANASAIGMEPNSDQSPVP 449
++ L ++ L F + ++L N++ IGM P++ SP+
Sbjct: 165 FGESWQDIQLGRLASDVPVPVELYVHLWDELGTFIDRENLLLVNSTPIGMHPHTMDSPIS 224
Query: 450 KEALK---AYELVFDAVYTPRNTRLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAP 506
E + A + +D +YTPR T+ L+ A GA + G+EM I+Q F L+ AP
Sbjct: 225 GEMMAKIGANSIAYDLIYTPRPTKFLQLAQGHGAIAIDGLEMLIQQGAIAFELWLQQAAP 284
Query: 507 EDFMRKLVLEQF 518
D MR+ +LE
Sbjct: 285 SDIMRQALLEHL 296
>gi|45358499|ref|NP_988056.1| shikimate 5-dehydrogenase [Methanococcus maripaludis S2]
gi|74554623|sp|Q6LYQ2.1|AROE_METMP RecName: Full=Shikimate dehydrogenase
gi|44921257|emb|CAF30492.1| shikimate 5-dehydrogenase [Methanococcus maripaludis S2]
Length = 278
Score = 132 bits (331), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 92/293 (31%), Positives = 154/293 (52%), Gaps = 25/293 (8%)
Query: 233 INPDTKIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLV--DDVKEFFRTYSGTDFA 290
IN TK+ GL+ +PV HS PI+HN A + + N Y V +++K+ +F
Sbjct: 2 INSKTKLVGLIGHPVDHSFSPIMHNAAIKDLKINYRYFAFDVSEENLKDVVAGAKAFNFR 61
Query: 291 GFSVGIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALR 350
GF++ IPHK + DE+ A++IGAVNT+ + +GK +GYNTD ++ AL
Sbjct: 62 GFNITIPHKMNIMKYLDEIDCDAEAIGAVNTV--KIENGKAIGYNTDG----IGVKKALE 115
Query: 351 ERQGINGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGARVIIFNRNYERAKALADAV 410
E+ GI + +G+GGA RA++F ++ + I NRN E+A+ L+ +
Sbjct: 116 EKTGILINKNILI---------IGSGGASRAVSFEL-AKDNNLTIVNRNIEKAENLSKEI 165
Query: 411 SGEALHFEYLH----EFFPEKGMILANASAIGMEPNSDQSPV-PKEALKAYELVFDAVYT 465
S + L+ + E I+ N + +GM P+++ PV P +K +V D +Y
Sbjct: 166 SRKLKKENPLNYGGLDINIENFDIIINTTPVGMYPHTEVEPVIPLNNIKKDAVVMDLIYN 225
Query: 466 PRNTRLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDF-MRKLVLEQ 517
P L+EA + GA ++G+ M + Q F ++T G+ P+ F M+K ++ +
Sbjct: 226 PLEPVFLKEAKKYGAKTINGIGMLVYQGAVSFEIWT-GIKPDIFVMKKSIISK 277
>gi|394992034|ref|ZP_10384827.1| shikimate 5-dehydrogenase [Bacillus sp. 916]
gi|393807050|gb|EJD68376.1| shikimate 5-dehydrogenase [Bacillus sp. 916]
Length = 280
Score = 131 bits (330), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 88/284 (30%), Positives = 139/284 (48%), Gaps = 22/284 (7%)
Query: 238 KIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLVD--DVKEFFRTYSGTDFAGFSVG 295
+++G++ NP+GHS P +HN A + NG Y V+ +K+ G +V
Sbjct: 3 QLYGVIGNPIGHSMSPDIHNAALQDKNINGQYFAFQVEPHHLKDAVNGIKALGICGVNVT 62
Query: 296 IPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALRERQGI 355
+PHK + DE+H AK +GAVNT+ R +L+GYNTD + ++ L +
Sbjct: 63 VPHKVAIMEHLDEIHESAKVLGAVNTVKRE--GDRLIGYNTDGDGFYKSLVKVLDK---- 116
Query: 356 NGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGARVI-IFNRNYERAKALADAV---- 410
PI+ +++GAGGA RA+ R + + NR E+A++L A
Sbjct: 117 --------PISELSILMIGAGGAARAIFTTIVRREPKQFDVCNRTPEKAESLIAAAPSFQ 168
Query: 411 SGEALHFEYLHEFFPEKGMILANASAIGMEPNSDQSPVPKEALKAYELVFDAVYTPRNTR 470
AL + + +I+ + +++GM P +D P+ E K +V D VY P T
Sbjct: 169 QKRALTLKEAENQLEQYDVII-HTTSVGMYPKTDAVPLSLERAKTGAIVCDIVYNPIQTA 227
Query: 471 LLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRKLV 514
L+EA + G T + GV MF+ QA F+L+TG MR +V
Sbjct: 228 FLKEAEKRGLTTLDGVGMFVEQAALSFKLWTGQEPDSGLMRAIV 271
>gi|448355080|ref|ZP_21543834.1| shikimate 5-dehydrogenase [Natrialba hulunbeirensis JCM 10989]
gi|445636424|gb|ELY89586.1| shikimate 5-dehydrogenase [Natrialba hulunbeirensis JCM 10989]
Length = 278
Score = 131 bits (330), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 116/295 (39%), Positives = 146/295 (49%), Gaps = 32/295 (10%)
Query: 238 KIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLVDDVKEFFRTYSGTD---FAGFSV 294
+FGL+ NPVGHS+ P +H A+ ++ YV D + +G D G +V
Sbjct: 2 DVFGLLGNPVGHSRSPPMHEAAYDELAYDARYV-TFEPDPSDLETAVAGADALGITGLNV 60
Query: 295 GIPHKEPAVACCDEVHP--LAKSIGAVNTIIRRP------IDGKLVGYNTDCESAISAIE 346
IP K+ +A D V P LA IGAVNTI P G + G+NTD A+ A
Sbjct: 61 TIPFKQDVLAL-DLVEPDDLATRIGAVNTIDFEPDSSRPNSSGHVTGHNTDAAGALRA-- 117
Query: 347 DALRERQGINGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGARVIIFNRNYERAKAL 406
LRE H AG V+VGAGGAGRA++F GA V I NR A L
Sbjct: 118 --LRE---------HDVTAAGADAVVVGAGGAGRAISFALADAGATVTIANRTESTAHEL 166
Query: 407 ADAV---SGEALHFEYLHEFFPEKGMILANASAIGMEPNSDQSPVPKEALKAYELVFDAV 463
AD V +G L L + IL NA+++GME D +PVP AL V DAV
Sbjct: 167 ADDVPNATGYGLGEGVLESLLADAD-ILVNATSVGME--EDATPVPAGALHVDLAVMDAV 223
Query: 464 YTPRNTRLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRKLVLEQF 518
Y P TRLLR+AA GAT V G M + Q + F L+TG AP D M + + Q
Sbjct: 224 YQPLETRLLRDAAAAGATTVDGAWMLLYQGVEAFELWTGRDAPVDVMNEALRAQL 278
>gi|435853263|ref|YP_007314582.1| shikimate 5-dehydrogenase [Halobacteroides halobius DSM 5150]
gi|433669674|gb|AGB40489.1| shikimate 5-dehydrogenase [Halobacteroides halobius DSM 5150]
Length = 286
Score = 131 bits (330), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 99/294 (33%), Positives = 155/294 (52%), Gaps = 28/294 (9%)
Query: 236 DTKIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLV--DDVKEFFRTYSGTDFAGFS 293
+ ++ GL PV HS P +HN AF+ N Y+P V D++KE R + G +
Sbjct: 2 NKQLTGLFGYPVEHSLSPAMHNAAFKELGLNSTYLPFAVKPDNLKEAVRGIKALNIKGVN 61
Query: 294 VGIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALRERQ 353
+ IPHK+ ++ D++ AK IGAVNTI + +GKL+G+NTD I A+++ +
Sbjct: 62 LTIPHKQKVISYLDQLSNEAKLIGAVNTIENQ--EGKLIGHNTDGRGYIRALQEEAK--- 116
Query: 354 GINGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGAR-VIIFNRNYERAKALADAVSG 412
+P +GK +++GAGGA RA+AF G + I NR E+AK L +
Sbjct: 117 --------FNP-SGKKVLVIGAGGAARAVAFQLSLEGINELYIANRTIEKAKGLVKDIKT 167
Query: 413 EA---------LHFEYLHEFFPEKGMILANASAIGMEPNSDQSPV-PKEALKAYELVFDA 462
+ L L + + +I+ + + +GM P +D PV + L + LV D
Sbjct: 168 KVSLNQVQPLPLSDNKLADIIKKLDLII-DTTPVGMHPQTDVEPVISAKLLHSNLLVSDL 226
Query: 463 VYTPRNTRLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRKLVLE 516
VY P+ T LL+EA +VGA +SG+ M + Q + F ++TG AP+ MR+ + E
Sbjct: 227 VYNPQETVLLQEAKKVGAETLSGLGMLLYQGVIAFEIWTGKKAPKKVMRRALEE 280
>gi|430820141|ref|ZP_19438778.1| shikimate 5-dehydrogenase [Enterococcus faecium E0045]
gi|430439831|gb|ELA50141.1| shikimate 5-dehydrogenase [Enterococcus faecium E0045]
Length = 284
Score = 131 bits (330), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 96/299 (32%), Positives = 150/299 (50%), Gaps = 36/299 (12%)
Query: 233 INPDTKIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYV-----PMLVDDVKEFFRTYSGT 287
I+ TK+ GL ++P HS P++HN AF + +Y+ PM + E RT+
Sbjct: 2 ISGQTKLAGLFADPASHSLSPLMHNTAFEANNIDAVYLAFQVNPMNLKQAVESIRTF--- 58
Query: 288 DFAGFSVGIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIED 347
D G ++ +P+K + DEV A+ IGAVNTI+ G+L+GYNTD + ++++
Sbjct: 59 DMLGVNLSMPNKTAVIPYLDEVSQEAQLIGAVNTIVHEK--GRLIGYNTDGAGFMQSVQE 116
Query: 348 ALRERQGINGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGAR-VIIFNRN---YERA 403
A GI+ I K L+GAGGA +A+ A GA ++++ RN + +
Sbjct: 117 A-----GIS--------IKKKKMTLLGAGGAAKAVTVQAALDGAEEIVVYKRNNQTFAQV 163
Query: 404 KALADAVSG------EALHFEYLHEFFPE--KGMILANASAIGMEPNSDQSPVPKEALKA 455
K + +S + F H+ + + +L NA+ IGM +QS + ++
Sbjct: 164 KETFEQLSYRTSCKIKVRDFADTHQLRKDLKESCLLVNATDIGMGKKINQSLLLDISMMH 223
Query: 456 YEL-VFDAVYTPRNTRLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRKL 513
L VFD +Y PR TRLL+EA +VGA +G+ M I Q F L+T P + KL
Sbjct: 224 ENLAVFDLIYAPRETRLLKEAKKVGAKGYNGLGMLIYQGAIAFELWTKEKMPIHVIEKL 282
>gi|296813541|ref|XP_002847108.1| pentafunctional AROM polypeptide [Arthroderma otae CBS 113480]
gi|327507651|sp|C5FQ73.1|ARO1_ARTOC RecName: Full=Pentafunctional AROM polypeptide; Includes: RecName:
Full=3-dehydroquinate synthase; Short=DHQS; Includes:
RecName: Full=3-phosphoshikimate
1-carboxyvinyltransferase; AltName:
Full=5-enolpyruvylshikimate-3-phosphate synthase;
Short=EPSP synthase; Short=EPSPS; Includes: RecName:
Full=Shikimate kinase; Short=SK; Includes: RecName:
Full=3-dehydroquinate dehydratase;
Short=3-dehydroquinase; Includes: RecName: Full=Shikimate
dehydrogenase
gi|238842364|gb|EEQ32026.1| pentafunctional AROM polypeptide [Arthroderma otae CBS 113480]
Length = 1571
Score = 131 bits (330), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 133/521 (25%), Positives = 233/521 (44%), Gaps = 68/521 (13%)
Query: 22 EMQASIEQAKVEGADLVELCIDSME----------FSHISE-VDKLIQHPTLPAIVSYRL 70
++ A I +A G+D +EL +D ++ +++E + L H + P I + R
Sbjct: 1064 QLSADILRAATFGSDAIELRVDLLKDPSSTSGVPSVGYVAEQMSFLRSHASQPLIFTIRT 1123
Query: 71 KSSRKSSDEACKNTCLQVLRRALDLDVEFVEMDYEVASDPLMSEIIYSRSNTKIIVS--- 127
K+ + + L++ + A+ + EFV+++ +D L+ + + +KII S
Sbjct: 1124 KAQGGQFPDDAVDKALELYKLAIRMGSEFVDLELSFPND-LLHAVTEMKGFSKIIASHHD 1182
Query: 128 -----SYLNGGGKPTTEKL---GDVIACMQATGADVMKLEIAVDSITDLAPVFEMLTHCQ 179
S+ NG K GD+I + A + +A+ A
Sbjct: 1183 VNSQLSWSNGSWIQYYNKALQHGDIIKLIGV--AKTFEDNMALQQFKSWAE-----KSYP 1235
Query: 180 VPLIALAVGSRGLISQLLGPKFGGFLVYGSLGGKSVPGLPTLVSLKQVYQLEHINPDTKI 239
VP+IA+ +G++G +S++L +F + + +L K+ PG + ++Q L D K
Sbjct: 1236 VPIIAINMGNKGRLSRILN-RFMTPVSHPALPFKAAPGQVSAKDIRQALTLMG-ELDAKK 1293
Query: 240 FGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLVD---DVKEFFRTYSGTDFAGFSVGI 296
F L P+ S+ P LHN F F Y + D +V++F R+ DF G SV I
Sbjct: 1294 FALFGKPISASRSPALHNALFTQAGFPHDYGLLETDKAENVEKFIRS---DDFGGASVTI 1350
Query: 297 PHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDG---KLVGYNTDCESAISAIEDALRERQ 353
P KE + DE+ P AK IGAVNTI+ + G +L+GYNTD + ++DA
Sbjct: 1351 PLKEQIMGLLDEISPEAKIIGAVNTIVPITVSGRPPRLIGYNTDWQGMARCLKDA----- 1405
Query: 354 GINGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRG-ARVIIFNRNYERAKALADAVSG 412
+ S+ G+ + +G+GG RA + S G + + + R LA +
Sbjct: 1406 --GAICSNN----GESALTIGSGGTARAAIYSLHSMGYSPIYLVGRTPSNLSKLASSFPA 1459
Query: 413 EALHFEYLHEFFPEKGMILANASAIGMEPNSD--QSPVPKEALKAYE---------LVFD 461
E + + + + K + A AI P ++P+P+ + E ++ D
Sbjct: 1460 E-YNIQVVQDI---KSVQAAPKVAISTIPGDQELENPLPELITQIMEKGQDSSRECILLD 1515
Query: 462 AVYTPRNTRLLREAAEVGATVVSGVEMFIRQALGQFRLFTG 502
Y P T + R A+ G ++ G+E+ + Q + QF +TG
Sbjct: 1516 MAYKPDVTTMARLASPAGWKIIKGLEVLVAQGIYQFEHWTG 1556
>gi|157694398|ref|YP_001488860.1| shikimate dehydrogenase [Bacillus pumilus SAFR-032]
gi|157683156|gb|ABV64300.1| shikimate dehydrogenase [Bacillus pumilus SAFR-032]
Length = 300
Score = 131 bits (330), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 94/306 (30%), Positives = 148/306 (48%), Gaps = 36/306 (11%)
Query: 232 HINPDTKIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLV--DDVKEFFRTYSGTDF 289
+I+ TK+ GL++ P+GHS P +HN + T N Y+ V D+++
Sbjct: 8 NIDGKTKLVGLLATPIGHSLSPRMHNLGYTLTGINYAYLAFEVGNDELEAAVYGMKAMGA 67
Query: 290 AGFSVGIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDAL 349
AGF+V +P+K + DE+ AK A NT++ + DGKL+GYNTD +
Sbjct: 68 AGFNVSMPNKMKVLNYLDELDDSAKYTRASNTVVNK--DGKLIGYNTDGLGYVR------ 119
Query: 350 RERQGINGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGARVI-IFNRN---YERAKA 405
+ H +AGK LVG+GGA +A G R I IF RN + +A+
Sbjct: 120 -------NLIEHGVELAGKKVTLVGSGGAATPIAIQLAQSGIREISIFARNDQYFVQAEE 172
Query: 406 LADAVSGEALHFEYLHEFFP-----------EKGMILANASAIGMEPNSDQSPVPKEALK 454
+ ++ E F FP + ILAN +++GM+P DQ + + L
Sbjct: 173 NVNYINNEMKSFGVKANIFPLEDKDAFRREVAESAILANGTSLGMKP-LDQLSIIDDTLD 231
Query: 455 AYE---LVFDAVYTPRNTRLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMR 511
+V D VY P+ T+LL +A E GA ++G+ M + Q ++LFTG P D ++
Sbjct: 232 VLREDLIVTDVVYNPQKTKLLAQAQEAGAKTINGLGMMLWQGALAYKLFTGEDMPVDQVK 291
Query: 512 KLVLEQ 517
+++ E
Sbjct: 292 QILFEN 297
>gi|298531015|ref|ZP_07018416.1| shikimate 5-dehydrogenase [Desulfonatronospira thiodismutans
ASO3-1]
gi|298509038|gb|EFI32943.1| shikimate 5-dehydrogenase [Desulfonatronospira thiodismutans
ASO3-1]
Length = 268
Score = 131 bits (330), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 89/286 (31%), Positives = 149/286 (52%), Gaps = 32/286 (11%)
Query: 240 FGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLVD--DVKEFFRTYSGTDFAGFSVGIP 297
+G++ +GHS P LHN AF+ +Y+ ++ ++ +F R +G SV IP
Sbjct: 5 YGVLGRTLGHSLSPYLHNCAFQAAGMKRVYLKWEIEPENLGDFIRAVRILPLSGASVTIP 64
Query: 298 HKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALRERQGING 357
+KE + D + P A +GAVNT+ L G NTDC ++ IED +
Sbjct: 65 YKEDVMEYLDYISPEASDMGAVNTLYWH--RKSLCGTNTDCRGFMAPIEDLQLDSA---- 118
Query: 358 VASHTSPIAGKIFVLVGAGGAGRALAFGAKSRG-ARVIIFNRNYERAKALADAVSGEALH 416
+++GAGGA RA+ +G K G + + + NR+ ++A A+A + +++
Sbjct: 119 -------------LILGAGGASRAVLYGLKRMGISNIYLTNRSKKKALAMAGEFNVKSIP 165
Query: 417 FEYLHEFFPEKGMILANASAIGMEPN-SDQSPVPKEALKAYELVFDAVYTPRNTRLLREA 475
++ E + K +L N + +G + D SP + ++ +++V+D VY P TRLL++A
Sbjct: 166 WD---ERYRLKADLLVNTTPLGTAGDLQDLSPW-ESSIFPFKIVYDLVYNPLQTRLLQQA 221
Query: 476 AEVGATVVSGVEMFIRQALGQFRLFTG-----GLAPEDFMRKLVLE 516
GA VSG+ MF+ QAL QF+++TG G A + RK+ E
Sbjct: 222 RAHGAHTVSGLSMFVHQALKQFKIWTGQGFDPGWAEDLLQRKITGE 267
>gi|21227376|ref|NP_633298.1| shikimate 5-dehydrogenase [Methanosarcina mazei Go1]
gi|452209858|ref|YP_007489972.1| Shikimate 5-dehydrogenase I alpha [Methanosarcina mazei Tuc01]
gi|24211496|sp|Q8PXE6.1|AROE_METMA RecName: Full=Shikimate dehydrogenase
gi|20905736|gb|AAM30970.1| Shikimate 5-dehydrogenase [Methanosarcina mazei Go1]
gi|452099760|gb|AGF96700.1| Shikimate 5-dehydrogenase I alpha [Methanosarcina mazei Tuc01]
Length = 280
Score = 131 bits (330), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 109/290 (37%), Positives = 145/290 (50%), Gaps = 27/290 (9%)
Query: 238 KIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLV--DDVKEFFRTYSGTDFAGFSVG 295
++FG+ +PVGHS P +HN AF + IY V + +++ F G ++
Sbjct: 3 QVFGVFGDPVGHSLSPAMHNAAFSALGMDCIYHAFRVTPEKLEKAILGAEAMGFGGINLT 62
Query: 296 IPHKEPAVACCDEVHP--LAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALRERQ 353
+P KE A+ D V P LAK IGAVNT++ G + GYNTD A A+ D E
Sbjct: 63 VPLKEKALKL-DFVKPDPLAKRIGAVNTLVFGK-KGDIQGYNTDGPGAKQALLDTGVE-- 118
Query: 354 GINGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGARVIIFNRNYERAKALADAVSGE 413
I G V+ GAGGA RA+AF + GA + + NR ERA LA +S
Sbjct: 119 -----------IRGSRMVVAGAGGAARAVAFQLAADGADITVINRTEERAVGLAREISAA 167
Query: 414 AL-------HFEYLHEFFPEKGMILANASAIGMEPNSDQSPVPKEALKAYELVFDAVYTP 466
L L E + +L N + +GM PN+D + V E L + VFD VY P
Sbjct: 168 DLPGKIRGTGLSGLKELLRDAD-VLINTTTLGMHPNTDATIVTAEELHSGLTVFDIVYNP 226
Query: 467 RNTRLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRKLVLE 516
TRLLREA GA +SGV M + Q FRL+TG P + M+K VLE
Sbjct: 227 LETRLLREARTSGAKTISGVLMLVYQGAEAFRLWTGVEPPLELMKKTVLE 276
>gi|159906101|ref|YP_001549763.1| shikimate 5-dehydrogenase [Methanococcus maripaludis C6]
gi|238687001|sp|A9AB08.1|AROE_METM6 RecName: Full=Shikimate dehydrogenase
gi|159887594|gb|ABX02531.1| shikimate 5-dehydrogenase [Methanococcus maripaludis C6]
Length = 279
Score = 131 bits (330), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 92/290 (31%), Positives = 150/290 (51%), Gaps = 25/290 (8%)
Query: 233 INPDTKIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLV--DDVKEFFRTYSGTDFA 290
I+ TK+ GL+ +PV HS PI+HN A + N Y+ V +++K A
Sbjct: 2 IDSKTKLIGLIGHPVEHSFSPIMHNAAIKDLGINYTYLAFDVSEENLKYIVSGAKALQIA 61
Query: 291 GFSVGIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALR 350
GF+V IPHK + DE+ AKSIGAVNT+ + +GK +GYNTD ++ AL
Sbjct: 62 GFNVTIPHKINIMKYLDEIDEDAKSIGAVNTV--KIENGKTIGYNTDG----IGVKRALE 115
Query: 351 ERQGINGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGARVIIFNRNYERAKALADAV 410
E+ GI + +G+GGA RA++F ++ + I NRN E+AK L++ +
Sbjct: 116 EKSGILINKNILI---------IGSGGASRAVSFEL-AKENNLTIVNRNIEKAKILSEEL 165
Query: 411 SGE-----ALHFEYLHEFFPEKGMILANASAIGMEPNSDQSPV-PKEALKAYELVFDAVY 464
S + ++ + L+ +I+ N + +GM P++D +PV P +K +V D +Y
Sbjct: 166 STKLKKENSIKYGALNIDIKNFDIII-NTTPVGMYPDTDVNPVIPLNDIKKSAVVMDLIY 224
Query: 465 TPRNTRLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRKLV 514
P L+EA + G ++G+ M + Q F+++TG M+K +
Sbjct: 225 NPLEPVFLKEAMKYGVETINGLGMLVYQGAVSFQIWTGKKPDVYVMKKAI 274
>gi|254432172|ref|ZP_05045875.1| shikimate 5-dehydrogenase [Cyanobium sp. PCC 7001]
gi|197626625|gb|EDY39184.1| shikimate 5-dehydrogenase [Cyanobium sp. PCC 7001]
Length = 295
Score = 131 bits (330), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 97/299 (32%), Positives = 143/299 (47%), Gaps = 36/299 (12%)
Query: 233 INPDTKIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYV--PMLVDDVKEFFRTYSGTDFA 290
I+ T + G++ +PV HS P +HN A + IY+ P ++ D
Sbjct: 5 ISASTALVGVLGDPVRHSLSPAMHNAALAALGLDWIYLALPTPAGELAAVVHALEALDCR 64
Query: 291 GFSVGIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALR 350
G +V +PHKE ACC E+ PLA +GAVNT++RR G L G NTD E ++ + R
Sbjct: 65 GLNVTLPHKEAVAACCAELSPLAARVGAVNTLVRRQAGGWL-GTNTDVEGFLAPLR---R 120
Query: 351 ERQGINGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGARVI-IFNR---NYER---- 402
E G + V++G GG+ RA+ G G I + R N ER
Sbjct: 121 EGHAWQGSRA----------VVLGCGGSARAVVAGLVELGCGAIAVAGRQAANLERFAAG 170
Query: 403 AKALADAVSGEALHFEYLHEFFPEKGMILANASAIGMEPNSDQS-----PVPKEALKAY- 456
+A A +S A H L E P +L N + +GM +D + P+ + L A
Sbjct: 171 CRAWAPQLSLHAWH--RLGELLP-GCQLLVNTTPVGMASPTDPAAARACPLDEAGLAALT 227
Query: 457 --ELVFDAVYTPRNTRLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLA-PEDFMRK 512
V+D +YTPR ++LLR AA G + G+EM ++Q RL++G A P + MR+
Sbjct: 228 PQAWVYDLIYTPRPSQLLRRAAGRGCRTLDGLEMLVQQGAASLRLWSGTAAVPVEAMRE 286
>gi|415885593|ref|ZP_11547521.1| shikimate 5-dehydrogenase [Bacillus methanolicus MGA3]
gi|387591262|gb|EIJ83581.1| shikimate 5-dehydrogenase [Bacillus methanolicus MGA3]
Length = 279
Score = 131 bits (330), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 87/288 (30%), Positives = 143/288 (49%), Gaps = 23/288 (7%)
Query: 238 KIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLVD--DVKEFFRTYSGTDFAGFSVG 295
K+FG++ +P+ HS P++HN F + Y P V D+ + + +GF+V
Sbjct: 3 KLFGVIGDPISHSMSPVMHNDLFMVYGIDAHYHPFHVKRGDLGAAVQGLKAINCSGFNVT 62
Query: 296 IPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALRERQGI 355
+PHK + DE+ PLA++IGAVNT++ +GKL+GYNTD + ++
Sbjct: 63 VPHKTEIMTFLDEIDPLAEAIGAVNTVVHE--EGKLIGYNTDGHGFLEGLKRKF------ 114
Query: 356 NGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGARVIIF-NRNYERAKALADAVSGEA 414
S ++ + +++GAGGA +A+ + G + I F NR E+A L ++
Sbjct: 115 --TVSDSTKV-----LIIGAGGAAKAIFYSMAHAGVKHIDFCNRTAEKAAQLIESCPFTV 167
Query: 415 LHFEYLHEFFPEKGM----ILANASAIGMEPNSDQSPVPKEALKAYELVFDAVYTPRNTR 470
Y E EK + ++ +++GM PN D SP+ E L V D +Y P T
Sbjct: 168 QSNIYTREE-AEKRLSSYNLIIQTTSVGMSPNIDDSPLSLENLGTGAFVSDIIYNPLETA 226
Query: 471 LLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRKLVLEQF 518
+LR+A GA +G++MF+ Q F +TG M++ VL+
Sbjct: 227 ILRDAKRRGAGTQNGLDMFVFQGALAFEKWTGIFPDTVRMKQNVLKHL 274
>gi|451822103|ref|YP_007458304.1| shikimate dehydrogenase AroE [Clostridium
saccharoperbutylacetonicum N1-4(HMT)]
gi|451788082|gb|AGF59050.1| shikimate dehydrogenase AroE [Clostridium
saccharoperbutylacetonicum N1-4(HMT)]
Length = 289
Score = 131 bits (330), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 94/299 (31%), Positives = 147/299 (49%), Gaps = 31/299 (10%)
Query: 231 EHINPDTKIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLVDD--VKEFFRTYSGTD 288
+ I+ T ++ L+ +PV HS P ++N +F+ + YV + + V + + +
Sbjct: 3 KRISGSTALYCLIGSPVDHSGSPAMYNYSFQKLGIDSAYVAFDISEEKVSDAIAAFKTLN 62
Query: 289 FAGFSVGIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDA 348
G +V +P K V DE+ P A+ IGAVNTII + GKL G+ TD + +++
Sbjct: 63 IRGANVTMPCKSEVVKYMDELSPAARIIGAVNTIINK--SGKLTGHITDGVGFVRNLKE- 119
Query: 349 LRERQGINGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGARVI-IFNRN---YERAK 404
H I GKI ++GAGGA A+ GA+ I IFN Y++A+
Sbjct: 120 ------------HGVDIKGKIITVLGAGGAATAIVVQCALDGAKEINIFNIKDAFYQKAE 167
Query: 405 ALADAVSGEA----LHFEYLHEFFPEKGMI-----LANASAIGMEPNSDQSPVPKEALKA 455
+ + E ++ L + G I L NA+ +GM PN ++SP+ +
Sbjct: 168 KTIENIKKEVPECVVNLCDLEDTQKLNGQIAASDILVNATRVGMHPNEEESPIKDTNVFT 227
Query: 456 YELVF-DAVYTPRNTRLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRKL 513
ELV D VY PR T+LL +A VG T+V G+ M + Q F+L+TG P D + +L
Sbjct: 228 KELVVADVVYNPRKTKLLEDAEAVGCTIVPGIGMLLWQGAEAFKLYTGLEMPADEVNEL 286
>gi|430852566|ref|ZP_19470297.1| shikimate 5-dehydrogenase [Enterococcus faecium E1258]
gi|430541400|gb|ELA81545.1| shikimate 5-dehydrogenase [Enterococcus faecium E1258]
Length = 284
Score = 131 bits (329), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 96/299 (32%), Positives = 150/299 (50%), Gaps = 36/299 (12%)
Query: 233 INPDTKIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYV-----PMLVDDVKEFFRTYSGT 287
I+ TK+ GL ++P HS P++HN AF + +Y+ PM + E RT+
Sbjct: 2 ISGQTKLAGLFADPASHSLSPLMHNTAFEANNIDAVYLAFKVNPMNLKQAVESIRTF--- 58
Query: 288 DFAGFSVGIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIED 347
D G ++ +P+K + DEV A+ IGAVNTI+ G+L+GYNTD + ++++
Sbjct: 59 DMLGVNLSMPNKTAVIPYLDEVSQEAQLIGAVNTIVHEK--GRLIGYNTDGAGFMQSVQE 116
Query: 348 ALRERQGINGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGAR-VIIFNRN---YERA 403
A GI+ I K L+GAGGA +A+ A GA ++++ RN + +
Sbjct: 117 A-----GIS--------IKKKKMTLLGAGGAAKAVTVQAALDGAEEIVVYKRNNQTFAQV 163
Query: 404 KALADAVSG------EALHFEYLHEFFPE--KGMILANASAIGMEPNSDQSPVPKEALKA 455
K + +S + F H+ + + +L NA+ IGM +QSP+ ++
Sbjct: 164 KETFEQLSYRTSCKIKVRDFADTHQLRKDLKESCLLVNATDIGMGKKINQSPLLDISMMH 223
Query: 456 YEL-VFDAVYTPRNTRLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRKL 513
L VFD +Y PR T LL+EA +VGA +G+ M I Q F L+T P + KL
Sbjct: 224 ENLAVFDLIYAPRETCLLKEAKKVGAKGYNGLGMLIYQGAIAFELWTKEKMPIHVIEKL 282
>gi|323702295|ref|ZP_08113961.1| shikimate 5-dehydrogenase [Desulfotomaculum nigrificans DSM 574]
gi|333924359|ref|YP_004497939.1| shikimate dehydrogenase [Desulfotomaculum carboxydivorans CO-1-SRB]
gi|323532785|gb|EGB22658.1| shikimate 5-dehydrogenase [Desulfotomaculum nigrificans DSM 574]
gi|333749920|gb|AEF95027.1| Shikimate dehydrogenase [Desulfotomaculum carboxydivorans CO-1-SRB]
Length = 293
Score = 131 bits (329), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 100/295 (33%), Positives = 147/295 (49%), Gaps = 23/295 (7%)
Query: 233 INPDTKIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLVD--DVKEFFRTYSGTDFA 290
IN +TK+ GL PV HS P +HN A++ N YVP V + + + A
Sbjct: 6 INGNTKVCGLFGWPVEHSFSPAMHNAAYQRLSLNYTYVPFNVHPASLPQAVQAVRALGLA 65
Query: 291 GFSVGIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALR 350
G +V +PHK+ + D++ A+ IGAVNTI+ +DGKLVGYNTD + ++ + R
Sbjct: 66 GVNVTVPHKQAVLPLLDQIDAAAQMIGAVNTIVN--VDGKLVGYNTDGSGFVKSLIEGAR 123
Query: 351 ERQGINGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGARVIIFNRNYERAKALADAV 410
+P +L G A A S A + I NR RA LA+ V
Sbjct: 124 -----------FAPKNKTALILGAGGAARAVAVQLALSGLAGLYITNRTPARAAELAEHV 172
Query: 411 SG----EALHFEYLHEFFPEKGM---ILANASAIGMEPNSDQSP-VPKEALKAYELVFDA 462
S +A+ + H+ + M ++ +++GM P+ DQ P P AL A +LV D
Sbjct: 173 SRTTGVQAVALPWGHDLPADIVMEVDLVVQTTSMGMSPHIDQCPDFPLTALHAGQLVCDL 232
Query: 463 VYTPRNTRLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRKLVLEQ 517
+Y P T LR AA GA ++G+ M + Q + F L+TG AP D MR+ +L+Q
Sbjct: 233 IYNPDQTAFLRGAAARGAATLNGLGMLLYQGVLAFELWTGQTAPVDVMREALLKQ 287
>gi|333914007|ref|YP_004487739.1| shikimate dehydrogenase [Delftia sp. Cs1-4]
gi|333744207|gb|AEF89384.1| Shikimate dehydrogenase [Delftia sp. Cs1-4]
Length = 279
Score = 131 bits (329), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 103/288 (35%), Positives = 151/288 (52%), Gaps = 26/288 (9%)
Query: 237 TKIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLVDDVKEFFRTYSGTDFA------ 290
T I +V +P+ + P +HN A+R + +V + + KE+ T DFA
Sbjct: 9 TSICVVVGDPIEFTLSPKMHNAAYRTLGIDDKFVFVCCEVNKEY--TSKIADFARVMGVC 66
Query: 291 GFSVGIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALR 350
G +V PH V DEV P+A+ IG+VNT++ R +L+GYNTD A++A+E
Sbjct: 67 GLAVANPHNTKIVQYLDEVDPVAELIGSVNTVVNRK--NRLIGYNTDWVGAVTALE---- 120
Query: 351 ERQGINGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGARVIIFNRNYERAKALADAV 410
+ + K ++GAGGA RA+AFG + RG+ + IF R+ ++A ALA V
Sbjct: 121 ----------LITTLDKKKVAILGAGGAARAIAFGLRERGSDISIFARDIKKASALARRV 170
Query: 411 SGEALHFEYLHEFFPEKGMILANASAIGMEPNSDQSPVPKEALKAYELVFDAVYTPRNTR 470
+L FE + I+ NA+ IG P + S V L + ++V DAVY P TR
Sbjct: 171 GAVSLTFEEIAGVADYD--IIVNATPIGKSPFQNISLVSASCLNSDQVVMDAVYLPLKTR 228
Query: 471 LLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRKLVLEQF 518
LL EA ++GA +V G+EM + Q QF + T AP D MR +L F
Sbjct: 229 LLVEAEKIGAKIVPGMEMLLHQGAAQFEIHTDCKAPLDAMRSSLLNIF 276
>gi|304403896|ref|ZP_07385558.1| shikimate 5-dehydrogenase [Paenibacillus curdlanolyticus YK9]
gi|304346874|gb|EFM12706.1| shikimate 5-dehydrogenase [Paenibacillus curdlanolyticus YK9]
Length = 293
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 89/293 (30%), Positives = 143/293 (48%), Gaps = 22/293 (7%)
Query: 233 INPDTKIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLV--DDVKEFFRTYSGTDFA 290
I+ T +FG++ +P+ HSK P++ N AFR NG+Y + D + +F
Sbjct: 15 IDSHTVLFGVIGDPIRHSKSPVMLNRAFREAGVNGVYTAFHITPDKLGDFIAGVRAMGIR 74
Query: 291 GFSVGIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALR 350
G +V IPHK + D + A +IGAVNTI+ +G L G+NTD + ++++
Sbjct: 75 GVNVTIPHKLDVMKHLDRIDESALAIGAVNTIVND--NGVLTGFNTDGIGYVRSLKEEAE 132
Query: 351 ERQGINGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRG-ARVIIFNRNYERAKALADA 409
+ GK V++GAGGA R + + + A + I NR +RA LA +
Sbjct: 133 ------------PTLDGKNIVVLGAGGAARGIVYALTNESPAAITIVNRTEQRAVELAAS 180
Query: 410 VSGEA----LHFEYLHEFFPEKGMILANASAIGMEPNSDQSPVPKEALKAYELVFDAVYT 465
+ A + + L + +I+ N ++ GM P+ ++SPV L+ + D +Y
Sbjct: 181 MRERADVRGVSTDSLQSVCVDADIII-NTTSTGMFPHVEESPVEASWLRPGAVASDIIYN 239
Query: 466 PRNTRLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRKLVLEQF 518
P T+ L +A G + G+ MFI Q F +TG AP MR+ VL+ F
Sbjct: 240 PMKTKFLADAERQGCRIHGGLGMFIYQGAYAFEYWTGQPAPAAAMREAVLDAF 292
>gi|389742773|gb|EIM83959.1| Pentafunctional AroM protein [Stereum hirsutum FP-91666 SS1]
Length = 1619
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 143/523 (27%), Positives = 235/523 (44%), Gaps = 58/523 (11%)
Query: 34 GADLVELCIDSM----EFSHI-----------SEVDKLIQHPTLPAIVSYRLKSSRKSSD 78
GAD +EL +D + +F H+ ++ L Q +LP + + R S
Sbjct: 1114 GADAIELRVDLLRSPKDFDHVGAYVPPAAYVTDQISALRQKTSLPIVFTARTVSQGGLFP 1173
Query: 79 EACKNTCLQVLRRALDLDVEFVEMDYEVASDPLMSEIIYSRSNTKIIVSSYLNGGG--KP 136
++ ++ AL L VE++ D E++ + SR I++S+ + G K
Sbjct: 1174 DSSVKEAFELFDLALRLGVEYI--DVEISWPEKKIRDLVSRKGHSQIIASWHDWSGRMKW 1231
Query: 137 TTEKLGDVIACMQATGADVMKLEIAVDSITDLAPVFEMLTHCQV-----PLIALAVGSRG 191
T+++ D G D++K+ +S+ D + ++ P++A+ +G G
Sbjct: 1232 NTQEVKDKYDLANTFG-DIVKIVGKANSLQDNLDLHAFVSKVTAALDSKPVLAINMGVEG 1290
Query: 192 LISQLLGPKFGGFLVYGSLGGKSVPGLPTLVSLKQVYQLEHINPDTKIFGLVSNPVGHSK 251
+S++L F + + L K+ PG + ++ L P K F + P+ HS
Sbjct: 1291 QLSRILNTTFSP-ITHPLLPSKAAPGQLSFAEIQSALYLMGQLPSKK-FYIFGTPIAHSP 1348
Query: 252 GPILHNPAFRHTRFNGIYVPMLVDDV-KEFFRTYSGTDFAGFSVGIPHKEPAVACCDEVH 310
P LHN F+ F Y + +V + T + DF G SV IP K +A D++
Sbjct: 1349 SPTLHNTGFKLLGFPHNYEILETTEVDSQVLVTITSPDFGGASVTIPFKRDIMAHLDQLS 1408
Query: 311 PLAKSIGAVNTIIRRPI---DGK--LVGYNTDCESAISAIEDALRERQGINGVASHTSPI 365
P A++IGAVNTII P+ +G L G NTD + I ++R R I
Sbjct: 1409 PEAEAIGAVNTII--PVYKSNGSHILYGDNTDWK----GISASIRSR---------LPAI 1453
Query: 366 AGKIFV--LVGAGGAGRALAFGAKSRGARVI-IFNRNYERAKALADAVSGEALH-FEYLH 421
K+ V ++GAGG RA + + GA+ I IFNR A+ L A+ G + + L
Sbjct: 1454 VHKVEVGLVIGAGGTSRAAIYALHALGAKKIYIFNRTRSSAEVLLHAIPGANVEVIDSLG 1513
Query: 422 EF-FPEKGMILAN--ASAIGMEPNSDQSPVPKEALKAYE--LVFDAVYTPRNTRLLREA- 475
+ P +I++ ASA +E + + V +L E +V D Y P T LL A
Sbjct: 1514 SWPGPAPSVIVSTVPASATTIESAATNALVLSPSLFRPEGGVVVDMAYKPAETPLLALAK 1573
Query: 476 AEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRKLVLEQF 518
E V GVE+ + Q QF+ +TG + P D + + V E++
Sbjct: 1574 KEQAWKAVMGVEVLLEQGYEQFQAWTGRVCPRDAVAQKVWEKY 1616
>gi|429505975|ref|YP_007187159.1| shikimate 5-dehydrogenase [Bacillus amyloliquefaciens subsp.
plantarum AS43.3]
gi|429487565|gb|AFZ91489.1| shikimate 5-dehydrogenase [Bacillus amyloliquefaciens subsp.
plantarum AS43.3]
Length = 280
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 89/285 (31%), Positives = 140/285 (49%), Gaps = 24/285 (8%)
Query: 238 KIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLVD--DVKEFFRTYSGTDFAGFSVG 295
+++G++ NP+GHS P +HN A + NG Y V+ +K+ G +V
Sbjct: 3 QLYGVIGNPIGHSMSPDIHNAALQDKNINGQYFAFQVEPHHLKDAVNGIKALGICGVNVT 62
Query: 296 IPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALRERQGI 355
+PHK + DE+H AK +GAVNT+ R +L+GYNTD + ++ L +
Sbjct: 63 VPHKVAIMEHLDEIHESAKVLGAVNTVKRE--GDRLIGYNTDGDGFYKSLVKVLDK---- 116
Query: 356 NGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRG--ARVIIFNRNYERAKALADAV--- 410
PI+ +++GAGGA RA+ F RG + + NR E+A++L A
Sbjct: 117 --------PISELSILMIGAGGAARAI-FTTIVRGEPKQFDVCNRTPEKAESLIAAAPSF 167
Query: 411 -SGEALHFEYLHEFFPEKGMILANASAIGMEPNSDQSPVPKEALKAYELVFDAVYTPRNT 469
AL + + +I+ + +++GM P +D P+ E K +V D VY P T
Sbjct: 168 QQKRALTLKEAENQLEQYDVII-HTTSVGMYPKTDAVPLSLERAKTGAIVCDIVYNPIQT 226
Query: 470 RLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRKLV 514
L+EA + G T + GV MF+ QA F+L+T MR +V
Sbjct: 227 AFLKEAEKRGLTTIDGVGMFVEQAALSFKLWTEQEPDSGLMRAIV 271
>gi|427726034|ref|YP_007073311.1| shikimate dehydrogenase [Leptolyngbya sp. PCC 7376]
gi|427357754|gb|AFY40477.1| shikimate dehydrogenase [Leptolyngbya sp. PCC 7376]
Length = 291
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 86/295 (29%), Positives = 142/295 (48%), Gaps = 29/295 (9%)
Query: 237 TKIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYV--PMLVDDVKEFFRTYSGTDFAGFSV 294
TK+ G++ +PV HS P++HN A + +Y+ P+ +++K + D GFS+
Sbjct: 7 TKLLGVIGDPVKHSFSPLMHNAAIAELGTDYVYLAFPISANNLKTALDGFRAIDLKGFSI 66
Query: 295 GIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALRERQG 354
IPHK+ +A + + P A+ +GAVNT+ + + G NTD I+ ++
Sbjct: 67 TIPHKQSIMAHLEAIAPEAQMVGAVNTVWQTETGWQ--GTNTDVAGFIAPLK-------A 117
Query: 355 INGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGA-RVIIFNRNYERAKALADAVSGE 413
++ S SP V++G GGA RA+ G G ++ + RN E+ A + G
Sbjct: 118 LDKDWSTVSP------VILGNGGAARAVVVGCHQLGCPQIHVIGRNPEKLTTFAKSWQGT 171
Query: 414 ALH-------FEYLHEFFPEKGMILANASAIGMEPNSDQSPVPKEALK---AYELVFDAV 463
L + L+ P L N++ +GM PN D SPV E +K + + +D +
Sbjct: 172 PLEQKLQTHLWGDLNRLIPTT-KFLVNSTPVGMHPNIDASPVSAELMKLLSSDSIAYDLI 230
Query: 464 YTPRNTRLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRKLVLEQF 518
YTP T+ L+ A GAT+ G+EM ++Q + P MR+ +LE
Sbjct: 231 YTPSPTQFLQLAQNQGATIFDGLEMLVQQGAIALEKWLAQPVPVATMRQALLEHL 285
>gi|407462089|ref|YP_006773406.1| shikimate 5-dehydrogenase [Candidatus Nitrosopumilus koreensis AR1]
gi|407045711|gb|AFS80464.1| shikimate 5-dehydrogenase [Candidatus Nitrosopumilus koreensis AR1]
Length = 273
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 89/286 (31%), Positives = 147/286 (51%), Gaps = 26/286 (9%)
Query: 238 KIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLV--DDVKEFFRTYSGTDFAGFSVG 295
K F ++ +P+ HS P +H+ AFR + Y+ + +++ E GF+V
Sbjct: 3 KTFAVIGDPIDHSLSPNIHSAAFRELNLDCSYIAYRIPKEELGEGIEGLKKIKINGFNVT 62
Query: 296 IPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALRERQGI 355
IPHK + D++ IGAVNT++ DG L GYNTD + + + L++R
Sbjct: 63 IPHKVEMMKYLDKIDESCSLIGAVNTVVNN--DGILKGYNTDMDGFL----EPLKKRN-- 114
Query: 356 NGVASHTSPIAGKIFVLVGAGGAGRALAFG-AKSRGARVIIFNRNYERAKALAD-----A 409
IA +L+GAGGA RA+ G AK + + I NR E+A +L + +
Sbjct: 115 -------VDIANSNVLLLGAGGAARAIVAGFAKEKAKSITIANRTIEKANSLVEFAQKIS 167
Query: 410 VSGEALHFEYLHEFFPEKGMILANASAIGMEPNSDQSPVPKEALKAYELVFDAVYTPRNT 469
+S A+ + + E +I+ NA++IG++ ++ SP+ E + +V+D VY P +T
Sbjct: 168 LSANAITVDKVGESAKNYNIIV-NATSIGLK--NESSPISLEGIDKETVVYDIVYMPMHT 224
Query: 470 RLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRKLVL 515
L++A E A V+ G EM + QA F ++ G AP + M+K +L
Sbjct: 225 DFLKKAKEKNAIVIFGYEMLLGQAARAFEIWHGMEAPYNAMKKALL 270
>gi|323136819|ref|ZP_08071900.1| shikimate 5-dehydrogenase [Methylocystis sp. ATCC 49242]
gi|322398136|gb|EFY00657.1| shikimate 5-dehydrogenase [Methylocystis sp. ATCC 49242]
Length = 281
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 96/269 (35%), Positives = 138/269 (51%), Gaps = 23/269 (8%)
Query: 241 GLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLVD--DVKEFFRTYSGTDFAGFSVGIPH 298
G++ P+ HS+ P +HN +G+YVP+ ++ ++ R FAG ++ IPH
Sbjct: 12 GVMGWPISHSRSPKIHNYWMSQYGIDGVYVPLAIEPGKLEAALRALPALCFAGCNLTIPH 71
Query: 299 KEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALRERQGINGV 358
KE A+ D + P A IGAVN ++ DG+L+G N D I+++ +A +
Sbjct: 72 KEAALNFLDRIEPAAARIGAVNCVVVGQ-DGELIGRNYDGYGFIASLREAAPD------W 124
Query: 359 ASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGARVI-IFNRNYERAKALADAVSG--EAL 415
+ +P V++GAGG RA+ G GAR I +FNR ERAKALA G A
Sbjct: 125 GAARAPC-----VVIGAGGGARAIVSGLIEAGAREIRLFNRTMERAKALAADFGGPVRAC 179
Query: 416 HFEYLHEFFPEKGMILANASAIGMEPNSDQSPVPKE--ALKAYELVFDAVYTPRNTRLLR 473
++ HE G+ L N ++ GM Q P+ AL A LV D VY P T LL
Sbjct: 180 AWQERHEALAGAGL-LVNTTSQGM---VGQQPLDLSLAALPATALVADIVYAPLETPLLA 235
Query: 474 EAAEVGATVVSGVEMFIRQALGQFRLFTG 502
EA +GAT V G+ M + QA FR ++G
Sbjct: 236 EARRMGATAVDGLGMLMHQARPAFRDWSG 264
>gi|182680472|ref|YP_001834618.1| shikimate 5-dehydrogenase [Beijerinckia indica subsp. indica ATCC
9039]
gi|182636355|gb|ACB97129.1| shikimate 5-dehydrogenase [Beijerinckia indica subsp. indica ATCC
9039]
Length = 284
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 97/283 (34%), Positives = 140/283 (49%), Gaps = 31/283 (10%)
Query: 230 LEHINPDTKIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLV--DDVKEFFRTYSGT 287
L NP K+ ++ P+ HS+ P++HN + G Y + V + + +F R G
Sbjct: 4 LPQDNPGPKVC-VIGYPIKHSRSPLIHNYWLQRYGIAGSYEKIEVAPEHLADFLRDLGGK 62
Query: 288 DFAGFSVGIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIED 347
F G +V +PHKE A A CDEV A+ +GAVNT+ R DG+L G+NTD E + A++
Sbjct: 63 GFVGANVTLPHKETAFALCDEVSEEARQLGAVNTLFLR--DGRLHGHNTDGEGFLGALDQ 120
Query: 348 ALRERQGINGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGA-RVIIFNRNYERAKAL 406
+ G A V++GAGGA RAL F RGA + + NR R++ +
Sbjct: 121 EVPAWDKDLGKA-----------VIIGAGGAARALVFALLRRGAGEIALVNRTLARSEEI 169
Query: 407 ADAVSGEALHFEYLHEFFPE---KGMILANASAIGMEPNS----DQSPVPKEALKAYELV 459
A G Y P+ +L NA+++GM D SP+P +A +V
Sbjct: 170 AMQGGGRITCHSYAD--LPDVLKTADLLVNATSLGMAGQEPLVIDLSPLPAKA-----IV 222
Query: 460 FDAVYTPRNTRLLREAAEVGATVVSGVEMFIRQALGQFRLFTG 502
D VY P T LLR+A G V G+ M + QA+ FRL+ G
Sbjct: 223 DDIVYVPLETDLLRQARLRGLRRVGGLGMLLHQAVPGFRLWFG 265
>gi|425054313|ref|ZP_18457820.1| shikimate dehydrogenase [Enterococcus faecium 505]
gi|403036076|gb|EJY47444.1| shikimate dehydrogenase [Enterococcus faecium 505]
Length = 284
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 96/299 (32%), Positives = 149/299 (49%), Gaps = 36/299 (12%)
Query: 233 INPDTKIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYV-----PMLVDDVKEFFRTYSGT 287
I+ TK+ GL ++P HS P++HN AF + +Y+ PM + E RT+
Sbjct: 2 ISGKTKLAGLFADPASHSLSPLMHNTAFEANDIDAVYLAFKVNPMNLKQAVESIRTF--- 58
Query: 288 DFAGFSVGIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIED 347
D G ++ +P+K + DEV A+ IGAVNTI+ G+L+GYNTD + ++++
Sbjct: 59 DMLGVNLSMPNKTAVIPYLDEVSQEAQLIGAVNTIVHEK--GRLIGYNTDGAGFMQSVQE 116
Query: 348 ALRERQGINGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGAR-VIIFNRN---YERA 403
A GI+ I K L+GAGGA +A+ A GA ++++ RN + +
Sbjct: 117 A-----GIS--------IEKKKMTLLGAGGASKAVTVQAALDGAEEIVVYKRNNQTFAQV 163
Query: 404 KALADAVSGEALHFEYLHEFFP--------EKGMILANASAIGMEPNSDQSPVPKEALKA 455
K + +S + +F ++ +L NA+ IGM +QSP+ +
Sbjct: 164 KETFEQLSYRTSCKIKVRDFADTDQLRKDLKESCLLVNATDIGMGKKINQSPLLDINMMH 223
Query: 456 YEL-VFDAVYTPRNTRLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRKL 513
L VFD +Y PR TRLL+EA +VGA +G+ M I Q F L+T P + KL
Sbjct: 224 ENLAVFDLIYEPRETRLLKEAKKVGAKGYNGLGMLIYQGAIAFELWTKEKMPIHVIEKL 282
>gi|212224285|ref|YP_002307521.1| shikimate 5-dehydrogenase [Thermococcus onnurineus NA1]
gi|212009242|gb|ACJ16624.1| aroE shikimate 5-dehydrogenase [Thermococcus onnurineus NA1]
Length = 275
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 95/285 (33%), Positives = 139/285 (48%), Gaps = 21/285 (7%)
Query: 233 INPDTKIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLVDDVKEFFRTYSGTDFAGF 292
++ +T ++GL+ PV HS P +HN FR N +Y+ V D++ + G
Sbjct: 1 MDAETVLYGLIGRPVSHSLSPAMHNALFRLYGMNAVYLAFEVSDLEGAIKGIRALGIRGL 60
Query: 293 SVGIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALRER 352
+V +PHKE V D + A+++ +VNT++ R G+L+G+NTD A A+E
Sbjct: 61 NVTMPHKETVVGHLDGLSSEAEALNSVNTVVNR--GGELIGHNTDGVGARKALE------ 112
Query: 353 QGINGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGARVIIFNRNYERAKALADAVSG 412
+ + G+ VL+ G S+ A V++ NR ERAK L +
Sbjct: 113 --------RFTKLKGR-RVLIIGAGGAGKAIAHELSKVASVVVLNRTPERAKTL-ERFGI 162
Query: 413 EALHFEYLH-EFFPEKGMILANASAIGMEPNSDQSPVPKEALKAYELVFDAVYTPRNTRL 471
E E E +L NA+ +GM N ++S VP E L +V DAVYTP T L
Sbjct: 163 EVGRLERSRLEAEIRNADVLINATPVGM--NEERSIVPPELLPEGAVVMDAVYTPPKTLL 220
Query: 472 LREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRKLVLE 516
LREA G V G+ M + Q FRL+TG DFMR++ LE
Sbjct: 221 LREAEARGCLTVDGLWMLVYQGAESFRLWTGVSPDVDFMRRVALE 265
>gi|254412118|ref|ZP_05025893.1| shikimate 5-dehydrogenase [Coleofasciculus chthonoplastes PCC 7420]
gi|196181084|gb|EDX76073.1| shikimate 5-dehydrogenase [Coleofasciculus chthonoplastes PCC 7420]
Length = 288
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 79/296 (26%), Positives = 145/296 (48%), Gaps = 29/296 (9%)
Query: 230 LEHINPDTKIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLV--DDVKEFFRTYSGT 287
++ I TK+ G++ +PV HS PI+HN A + +Y+P+ V +D+ ++
Sbjct: 1 MQQITGTTKLLGVIGHPVEHSLSPIMHNRAIAQLGVDYVYLPLPVKPEDLDVAVAGFAAI 60
Query: 288 DFAGFSVGIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIED 347
GF++ IPHK+ + EV +A+ +GAVNT+ R D G NTD I+ +
Sbjct: 61 GLQGFNITIPHKQAIIPLLAEVSDIAQLVGAVNTVWRT--DKGWSGTNTDVLGFIAPLNQ 118
Query: 348 ALRERQGINGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRG-ARVIIFNRNYERAKAL 406
R+ HT V++G GGA RA+ G G + + RN +
Sbjct: 119 YQRDWH-------HTK------AVVLGYGGAARAVVVGCMQLGCPEIWVVGRNPYKLSQF 165
Query: 407 ADAVSG-------EALHFEYLHEFFPEKGMILANASAIGMEPNSDQSPVPKEALKAYE-- 457
+ + +A +E + + ++ +L N + +GM P+ ++SP+ +E ++
Sbjct: 166 QQSWANTPLSKILQAYPWEEMPQLL-QQADLLVNTTPVGMSPHVNESPIDEEIIQRLPKG 224
Query: 458 -LVFDAVYTPRNTRLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRK 512
+ +D +YTP T+ L++A + GA + G+EM ++Q +++ G P + MR+
Sbjct: 225 AIAYDLIYTPNPTKFLQQAKQQGANPIDGLEMLVQQGAAALQIWLGQTPPVEIMRE 280
>gi|14520666|ref|NP_126141.1| shikimate 5-dehydrogenase [Pyrococcus abyssi GE5]
gi|24211539|sp|Q9V1H7.1|AROE_PYRAB RecName: Full=Shikimate dehydrogenase
gi|5457882|emb|CAB49372.1| aroE shikimate 5-dehydrogenase [Pyrococcus abyssi GE5]
gi|380741199|tpe|CCE69833.1| TPA: shikimate 5-dehydrogenase [Pyrococcus abyssi GE5]
Length = 264
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 91/282 (32%), Positives = 141/282 (50%), Gaps = 23/282 (8%)
Query: 238 KIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLVDDVKEFFRTYSGTDFAGFSVGIP 297
K++GL+ PV HS P++HN FR + +YV V+++ + +G +V +P
Sbjct: 2 KVYGLIGKPVSHSLSPVMHNALFRKYGIDAVYVTFEVEELGKAIDGVRALGISGLNVTMP 61
Query: 298 HKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALRERQGING 357
+KE DE+ A+ I +VNTII ++G L+GY TD A A+E E +G N
Sbjct: 62 YKEVVTKFLDELSEDAREINSVNTIIN--LEGSLIGYTTDGVGARKALE-RFTEIEGRN- 117
Query: 358 VASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGARVIIFNRNYERAKALAD-AVSGEALH 416
VL+ G S+ A +++ NR +AK+L V G +L
Sbjct: 118 -------------VLILGAGGAGKAIAYELSKIANIVVLNRTPSKAKSLEKFGVKGGSL- 163
Query: 417 FEYLHEFFPEKGMILANASAIGMEPNSDQSPVPKEALKAYELVFDAVYTPRNTRLLREAA 476
+ L + +L NA+++GM N +S VP+ L+ +V D VY P TRLLR+A
Sbjct: 164 -DELPNYVGWAD-VLINATSVGMGTN--ESLVPRRLLRRELIVMDIVYKPLKTRLLRDAE 219
Query: 477 EVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRKLVLEQF 518
VG V+ G+ M I Q F+L+TG + MR++ LE+
Sbjct: 220 SVGCRVIDGLWMLIYQGAESFKLWTGIYPDVELMRRVSLERL 261
>gi|433639425|ref|YP_007285185.1| shikimate 5-dehydrogenase [Halovivax ruber XH-70]
gi|433291229|gb|AGB17052.1| shikimate 5-dehydrogenase [Halovivax ruber XH-70]
Length = 291
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 120/301 (39%), Positives = 152/301 (50%), Gaps = 39/301 (12%)
Query: 238 KIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLVDD--VKEFFRTYSGTDFAGFSVG 295
++GL+ NPVGHS P +H A+ + YV D + + R S AG +V
Sbjct: 2 DVYGLLGNPVGHSLSPPMHEAAYEARGMDATYVTFEPDRDALGDAIRGASSLGIAGLNVT 61
Query: 296 IPHKEPAVACCDEVHP--LAKSIGAVNTI---------------IRRPIDGKLVGYNTDC 338
IP KE A+ D V P LA IGAVNTI + RP G+NTD
Sbjct: 62 IPFKEGAI---DHVEPDDLAARIGAVNTIAFPEGGSAGADDRDAVTRP-----TGHNTDA 113
Query: 339 ESAISAIEDALRERQGINGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGARVIIFNR 398
A+ A LRER G A + G V+VGAGGAGRA+AFG GA V + NR
Sbjct: 114 AGAVRA----LRER----GFADRDDSLDGATAVVVGAGGAGRAIAFGLAEAGATVRVANR 165
Query: 399 NYERAKALADAVSGEALH-FEYLHEFFPEKGMILANASAIGMEPNSDQSPVPKEALKAYE 457
ERA ALA V + H + L + +L NA+++GME SD+S VP EAL
Sbjct: 166 TVERATALASEVPDASGHGLDDLPTLLADA-TVLVNATSVGME--SDESIVPSEALHEDL 222
Query: 458 LVFDAVYTPRNTRLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRKLVLEQ 517
+V DAVY PR TRLLR+AA GAT V G M + Q F +TG AP M +++
Sbjct: 223 VVMDAVYRPRETRLLRDAAATGATAVDGTWMLLYQGAAAFERWTGRDAPVAAMGRVLRSS 282
Query: 518 F 518
F
Sbjct: 283 F 283
>gi|410668003|ref|YP_006920374.1| shikimate dehydrogenase [Thermacetogenium phaeum DSM 12270]
gi|409105750|gb|AFV11875.1| shikimate dehydrogenase AroE [Thermacetogenium phaeum DSM 12270]
Length = 301
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 97/294 (32%), Positives = 140/294 (47%), Gaps = 24/294 (8%)
Query: 233 INPDTKIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLV--DDVKEFFRTYSGTDFA 290
I TK+F L +PVGHS P++ N AF + YVP+ V D +
Sbjct: 5 IGGQTKVFALYGDPVGHSLSPVMQNRAFAACGLDCCYVPLRVKRDGLATAVAAIRALGLG 64
Query: 291 GFSVGIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAI-EDAL 349
G ++ IPHKE + DEV A+ IGAVN ++RR + +L GYNTD + ++ E+A
Sbjct: 65 GVNITIPHKESVLKYLDEVDREAELIGAVNAVVRR--ENRLCGYNTDAAGFLRSLREEAG 122
Query: 350 RERQGINGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGARVIIFNRNYERAKALA-- 407
E G V A + + GGA + + NR+ RA+ LA
Sbjct: 123 FEATGKKAVVLGAGGAARAVAFALAIGGA------------VSLSVINRDPGRARTLAAD 170
Query: 408 -DAVSGEALHFEYLHEFFPEKGM----ILANASAIGMEPNSDQSPVPKEALKAYELVFDA 462
+ +G H+ E+ + ++ NA+ +GM P+ SP+P E L LV D
Sbjct: 171 LERKTGCCTAAGSFHDGLLEEALKGADLVVNATPVGMFPDCHSSPIPAEKLPPGILVCDL 230
Query: 463 VYTPRNTRLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRKLVLE 516
VY P T+LL +AA G V++GV M + Q F L+TG AP MR+ V E
Sbjct: 231 VYNPIRTKLLADAAAAGCRVLNGVGMLVAQGALAFELWTGIEAPVAAMREAVEE 284
>gi|440684478|ref|YP_007159273.1| shikimate dehydrogenase [Anabaena cylindrica PCC 7122]
gi|428681597|gb|AFZ60363.1| shikimate dehydrogenase [Anabaena cylindrica PCC 7122]
Length = 288
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 79/281 (28%), Positives = 141/281 (50%), Gaps = 28/281 (9%)
Query: 233 INPDTKIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLV--DDVKEFFRTYSGTDFA 290
I+ TK+ G++ +PV HS P++HN A + +Y+P + ++++ ++
Sbjct: 2 ISGKTKLLGVIGHPVEHSLSPVMHNAALTKLGLDYVYLPFPIAPENLEIAIAGFTAIGVV 61
Query: 291 GFSVGIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALR 350
GFSV IPHK+ + E+ P+A++IGAVNT+ R+ VG NTD E IS ++
Sbjct: 62 GFSVTIPHKQAILPFLTEISPIAQAIGAVNTVTRQ--GNGWVGTNTDVEGFISPLQ---- 115
Query: 351 ERQGINGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRG-ARVIIFNRNYERAKALADA 409
++ + K V++G GGA RA+ G G A + + RN ++ +
Sbjct: 116 --------TTYNQDWSQKTAVILGNGGAARAVVAGCIQLGLAEIHVVGRNLQKLTEFWQS 167
Query: 410 VSGEAL-------HFEYLHEFFPEKGMILANASAIGMEPNSDQSPVPKEA---LKAYELV 459
++ L + P+ + L N + +GM P+ DQSP+ E L + +V
Sbjct: 168 WQNSPFADKFQVHDWQELPKLIPQANL-LVNTTPVGMYPHVDQSPLSIEEMVDLPSGGIV 226
Query: 460 FDAVYTPRNTRLLREAAEVGATVVSGVEMFIRQALGQFRLF 500
+D +Y P+ T+ L+ A + GA + G+EM ++Q +++
Sbjct: 227 YDLIYIPKPTQFLKLAEKQGAIPIDGLEMLVQQGAAALKIW 267
>gi|52081116|ref|YP_079907.1| shikimate 5-dehydrogenase [Bacillus licheniformis DSM 13 = ATCC
14580]
gi|319644927|ref|ZP_07999160.1| shikimate dehydrogenase [Bacillus sp. BT1B_CT2]
gi|404489997|ref|YP_006714103.1| shikimate 5-dehydrogenase [Bacillus licheniformis DSM 13 = ATCC
14580]
gi|423683093|ref|ZP_17657932.1| shikimate 5-dehydrogenase [Bacillus licheniformis WX-02]
gi|81690974|sp|Q65H34.1|AROE_BACLD RecName: Full=Shikimate dehydrogenase
gi|52004327|gb|AAU24269.1| shikimate 5-dehydrogenase [Bacillus licheniformis DSM 13 = ATCC
14580]
gi|52348996|gb|AAU41630.1| shikimate dehydrogenase AroD [Bacillus licheniformis DSM 13 = ATCC
14580]
gi|317392736|gb|EFV73530.1| shikimate dehydrogenase [Bacillus sp. BT1B_CT2]
gi|383439867|gb|EID47642.1| shikimate 5-dehydrogenase [Bacillus licheniformis WX-02]
Length = 278
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 94/285 (32%), Positives = 140/285 (49%), Gaps = 20/285 (7%)
Query: 239 IFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLVD--DVKEFFRTYSGTDFAGFSVGI 296
I+GL+ NPV HS P +HN A + G Y V+ D+++ + GF+V +
Sbjct: 4 IYGLIGNPVAHSMSPDIHNAALKDLSLEGHYHAFRVENEDLEDAVKGMRALGIQGFNVTV 63
Query: 297 PHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALRERQGIN 356
PHK + D + A+++GAVNT+ RR +G LVGYNTD + +++ +L
Sbjct: 64 PHKVSIMKHLDRIDESAEALGAVNTV-RREKEG-LVGYNTDGAGFLKSLKPSLDR----- 116
Query: 357 GVASHTSPIAGKIFVLVGAGGAGRAL-AFGAKSRGARVIIFNRNYERAKALADAVSGEAL 415
P++ +L+GAGGA RA+ A R+ + NR E+A A GEA
Sbjct: 117 -------PLSELSILLIGAGGAARAIFTTLAAETPKRLDVANRTPEKALAFTQRFDGEAR 169
Query: 416 HFEYLHEFFPEKGM--ILANASAIGMEPNSDQSPVPKEALKAYELVFDAVYTPRNTRLLR 473
L E + I+ +++GM PN + +P+ K LV D +Y P T LL
Sbjct: 170 ALS-LQEAEADLSAYDIVIQTTSVGMHPNVEAAPLSLANAKETCLVCDIIYNPLKTALLH 228
Query: 474 EAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRKLVLEQF 518
EA G + GV MFI QA F L+TG + M+ +VL+Q
Sbjct: 229 EAEAKGLKTLDGVGMFIGQAALAFELWTGHEPNMEKMKSIVLQQL 273
>gi|164688575|ref|ZP_02212603.1| hypothetical protein CLOBAR_02220 [Clostridium bartlettii DSM
16795]
gi|164602988|gb|EDQ96453.1| shikimate dehydrogenase [Clostridium bartlettii DSM 16795]
Length = 288
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 95/303 (31%), Positives = 146/303 (48%), Gaps = 34/303 (11%)
Query: 230 LEHINPDTKIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLV--DDVKEFFRTYSGT 287
+ I+ TK++ ++ +PV S P +HN F + +YV V D VKE
Sbjct: 1 MSSISSKTKVYSVIGHPVSQSFSPKIHNYLFEKYDIDAVYVSYDVNPDRVKEGIEGIRHL 60
Query: 288 DFAGFSVGIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIED 347
G +V IPHK + DE+ AK GAVNTI + +DGKL GYNTD +I D
Sbjct: 61 GIMGTNVTIPHKIEVMKYLDEIDKKAKLFGAVNTI--KNVDGKLYGYNTDGTGLTKSIRD 118
Query: 348 ALRERQGINGVASHTSPIAGKIFVLVGAGGAGRALAFG-AKSRGARVIIFNRNYERAKAL 406
+ E I GK +++GAGGA R++A A A + I NR+ E+A+ +
Sbjct: 119 SSGED------------IKGKKVLIIGAGGACRSIAIQLAIEEAASIEIVNRSIEKAQII 166
Query: 407 ADAVSGEALHFEY--------LHEFFPEKGMILANASAIGMEPNSDQSPVPKEALKAYEL 458
AD ++ HFE + + + IL N + IGM +D+SP+ + +
Sbjct: 167 ADTINS---HFETKAIASSKTITQDDIDNVDILINTTPIGM--GTDESPIDTSLVPPKNM 221
Query: 459 VF-DAVYTPRNTRLLREAAEVGATVVSGVEMFIRQALGQFRLFTG---GLAPEDFMRKLV 514
+ DAVY P T L++ + + G++M I Q + F ++TG L + + K+
Sbjct: 222 IVADAVYKPHETALIKWGLKYNLKIAYGIQMLINQGIHSFSIWTGINPTLEDTENILKIF 281
Query: 515 LEQ 517
LEQ
Sbjct: 282 LEQ 284
>gi|162449910|ref|YP_001612277.1| hypothetical protein sce1639 [Sorangium cellulosum So ce56]
gi|161160492|emb|CAN91797.1| aroE1 [Sorangium cellulosum So ce56]
Length = 258
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 101/269 (37%), Positives = 143/269 (53%), Gaps = 18/269 (6%)
Query: 250 SKGPILHNPAFRHTRFNGIYVPMLVDDVKEFFRTYSGTDFAGFSVGIPHKEPAVACCDEV 309
+ G +H +R + Y+P V DV+ R G V +P+K+ + DE+
Sbjct: 7 TTGAAMHLAGYRALGLDFTYIPFAVTDVEGATRGMRALGIRGLGVSMPYKQAVIPLLDEL 66
Query: 310 HPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALRERQGINGVASHTSPIAGKI 369
P+A+ IGAVNTI+ DG+L GYNTD A+ A+E+ + + G
Sbjct: 67 DPVAERIGAVNTIVND--DGRLRGYNTDWIGAVRALEE--------------VTHLGGAR 110
Query: 370 FVLVGAGGAGRALAFGAKSRGARVIIFNRNYERAKALADAVSGEALHFEYLHEFFPEKGM 429
+L+GAGGA RA+AFG RGA V + NR+ E+A+ LA AV G A+ + P+ G
Sbjct: 111 VLLLGAGGAARAVAFGLAERGASVTVANRDLEKARQLAAAVGGAAVPLDA-AALSPDHG- 168
Query: 430 ILANASAIGMEPNSDQSPVPKEALKAYELVFDAVYTPRNTRLLREAAEVGATVVSGVEMF 489
+L NA+++GM +SPVP+E L+ LV D VY P T L+ A GAT V G M
Sbjct: 169 VLVNATSLGMAEVDARSPVPEEVLREGLLVMDIVYKPMITELVAAARRRGATAVHGGRML 228
Query: 490 IRQALGQFRLFTGGLAPEDFMRKLVLEQF 518
+ QA QFRL+TG P D M + + Q
Sbjct: 229 LHQAAEQFRLYTGREPPLDAMDEALRAQL 257
>gi|407980292|ref|ZP_11161085.1| shikimate dehydrogenase [Bacillus sp. HYC-10]
gi|407413004|gb|EKF34747.1| shikimate dehydrogenase [Bacillus sp. HYC-10]
Length = 300
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 92/305 (30%), Positives = 149/305 (48%), Gaps = 34/305 (11%)
Query: 232 HINPDTKIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLV--DDVKEFFRTYSGTDF 289
+I+ TK+ GL++ P+GHS P +HN + T N Y+ V D+++
Sbjct: 8 NIDGKTKLVGLLATPIGHSLSPRMHNLGYTLTGINYAYLAFEVGNDELEAAVNGMKAMGA 67
Query: 290 AGFSVGIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDAL 349
AGF+V +P+K + DE+ AK A NT++ + DGKLVGYNTD +
Sbjct: 68 AGFNVSMPNKMKVLDYLDELDDSAKYTRASNTVVNK--DGKLVGYNTDGLGYVR------ 119
Query: 350 RERQGINGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGARVI-IFNRN---YERAKA 405
+ H + G+ LVG+GGA +A G R I IF RN + +A+
Sbjct: 120 -------NLIEHGVELTGQKVTLVGSGGAATPIAIQLAQSGIREISIFARNDQYFVQAEE 172
Query: 406 LADAVSGEALHFEYLHEFFP-----------EKGMILANASAIGMEPNSDQSPVPK--EA 452
A+ ++ E F FP + ILAN +++GM+P + S + +
Sbjct: 173 NANYINNEMKSFGVKANLFPLEDKDAFRREVAESAILANGTSLGMKPLDELSIIDDTLDV 232
Query: 453 LKAYELVFDAVYTPRNTRLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRK 512
L+ +V D VY P+ T+LL +A E GA ++G+ M + Q ++LFTG P + +++
Sbjct: 233 LRKDLIVTDVVYNPQKTKLLAQAQEAGAKTINGLGMMLWQGALAYKLFTGEDMPVEQVKQ 292
Query: 513 LVLEQ 517
++ E
Sbjct: 293 ILFEN 297
>gi|90962767|ref|YP_536682.1| shikimate 5-dehydrogenase [Lactobacillus salivarius UCC118]
gi|301300360|ref|ZP_07206564.1| shikimate dehydrogenase [Lactobacillus salivarius ACS-116-V-Col5a]
gi|90821961|gb|ABE00599.1| Shikimate 5-dehydrogenase [Lactobacillus salivarius UCC118]
gi|300852044|gb|EFK79724.1| shikimate dehydrogenase [Lactobacillus salivarius ACS-116-V-Col5a]
Length = 291
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 95/307 (30%), Positives = 155/307 (50%), Gaps = 37/307 (12%)
Query: 230 LEHINPDTKIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLVDDVK-----EFFRTY 284
+E I+ T + GL++ P+ HS P +HN AF N Y+ +D+ K + RT
Sbjct: 1 MERIDGHTLLIGLMAYPIRHSMSPTMHNNAFAKLGLNYAYLAFEIDNDKLEKAVDAIRTL 60
Query: 285 SGTDFAGFSVGIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISA 344
D G +V +P+K+ + D++ P AK GAVNT++ +G L GY TD + +
Sbjct: 61 ---DMRGSNVSMPNKQKIIPYLDKLDPAAKMAGAVNTVVND--NGVLTGYTTDGTGFMKS 115
Query: 345 IEDALRERQGINGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGARVI-IFNRN---Y 400
+ D +G++ I GK L GAGGAG +A A G + I IFN + +
Sbjct: 116 LAD-----EGLD--------IRGKKMTLAGAGGAGTPIAIQAALDGVKEISIFNLDDAQW 162
Query: 401 ERAKALADAVSGEA------LHFEYLHEFFPE--KGMILANASAIGMEPNSDQSPVPKEA 452
E+A+ + ++ E H E +F E I +A+ +GM+P + + V +
Sbjct: 163 EQAEKNVEIINRETDCKATLHHLEDKEDFKKEIASSYIYCDATGVGMKPLENMTLVEDPS 222
Query: 453 LKAYEL-VFDAVYTPRNTRLLREAAEVGAT-VVSGVEMFIRQALGQFRLFTGGLAPEDFM 510
++ VFD VY PR T+L++ A E G V++G+ M + Q F+L+TG P D++
Sbjct: 223 WFHKDMIVFDTVYAPRETKLMKVAKEAGVDHVLNGLGMMLEQGAEAFKLWTGEDMPVDYI 282
Query: 511 RKLVLEQ 517
R+L+ +
Sbjct: 283 RELLFSE 289
>gi|403668288|ref|ZP_10933563.1| shikimate dehydrogenase [Kurthia sp. JC8E]
Length = 279
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 90/286 (31%), Positives = 142/286 (49%), Gaps = 19/286 (6%)
Query: 238 KIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLV--DDVKEFFRTYSGTDFAGFSVG 295
K + ++ +P+ HS P +HN + Y+P+ V + ++ F +GF+V
Sbjct: 5 KWYAVIGDPIEHSMSPFMHNLWMTSEGRDATYIPLHVSRESLRASFEGMKVLGCSGFNVT 64
Query: 296 IPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALRERQGI 355
IPHKE + DEV LA+ +GAVNT++R+ DGK GYNTD + ++ED +
Sbjct: 65 IPHKEAIIPLLDEVDALAEKMGAVNTVVRQA-DGKYKGYNTDGLGFVRSLEDVVG----- 118
Query: 356 NGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGAR-VIIFNRNYERAKALADAV--SG 412
TS K+ VL GAGGA R + F G R + I NR E+A+A+ + S
Sbjct: 119 ------TSHKQEKVLVL-GAGGASRGICFALWQEGYRDITIANRTVEKARAICLEMDPSV 171
Query: 413 EALHFEYLHEFFPEKGMILANASAIGMEPNSDQSPVPKEALKAYELVFDAVYTPRNTRLL 472
+A + + G+++ SA G+ + P+ E L +V D VY P T L
Sbjct: 172 KACSLQQASDELGAYGIVIQTTSA-GLNHSQFALPISLEHLANTAIVADIVYNPLMTPFL 230
Query: 473 REAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRKLVLEQF 518
++ + GATVV+G+ MFI Q + +T +++ +LEQ
Sbjct: 231 EQSQKQGATVVTGLGMFIHQGALAYEHWTTVYPDAKVVKQSLLEQL 276
>gi|383753808|ref|YP_005432711.1| putative shikimate dehydrogenase [Selenomonas ruminantium subsp.
lactilytica TAM6421]
gi|381365860|dbj|BAL82688.1| putative shikimate dehydrogenase [Selenomonas ruminantium subsp.
lactilytica TAM6421]
Length = 283
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 90/279 (32%), Positives = 138/279 (49%), Gaps = 24/279 (8%)
Query: 233 INPDTKIFGLVSNPVGHSKGPILHNPAFRHT--RFNGIYVPMLVDDVKEFFRTYSGTDFA 290
I T+ G++ P+ HS P+L N A +N +P+ + + E +
Sbjct: 2 ITGKTQNLGVIGWPIAHSLSPVLQNAAIEKAGIDYNYTALPVAPEKLAEAVTGLKALHYR 61
Query: 291 GFSVGIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALR 350
G++V IPHK + DE+ A+ IGAVNT++ +GKL G+NTDC + A L
Sbjct: 62 GWNVTIPHKTAIMPLLDEIDEDARIIGAVNTVVND--NGKLKGFNTDCLGFMGA----LT 115
Query: 351 ERQGINGVASHTSPIAGKIFVLVGAGGAGRALAFG-AKSRGARVIIFNRNYERAKALADA 409
+RQ + I GK VL+GAGGA RA+ +G K+ V++ RN +A++LA
Sbjct: 116 KRQ---------AAIKGKKVVLLGAGGAARAVIWGLIKAEAQEVVLGVRNPAKAESLAAE 166
Query: 410 VS--GEALHFEYLHEFFPE---KGMILANASAIGMEPNSDQSP-VPKEALKAYELVFDAV 463
S G+ + E F + +L N + +GM P D P V + +V+D +
Sbjct: 167 FSRYGKVTVCHWESEEFTQVLADCALLVNTTPLGMTPKVDACPPVDWSKVNPSAVVYDII 226
Query: 464 YTPRNTRLLREAAEVGATVVSGVEMFIRQALGQFRLFTG 502
YTP T LR+A E G +++G EM Q +L+TG
Sbjct: 227 YTPAETLFLRQAREHGHVIINGEEMLAGQGAAALQLWTG 265
>gi|227891979|ref|ZP_04009784.1| shikimate 5-dehydrogenase [Lactobacillus salivarius ATCC 11741]
gi|227866183|gb|EEJ73604.1| shikimate 5-dehydrogenase [Lactobacillus salivarius ATCC 11741]
Length = 291
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 95/307 (30%), Positives = 156/307 (50%), Gaps = 37/307 (12%)
Query: 230 LEHINPDTKIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLVDDVK-----EFFRTY 284
+E I+ T + GL++ P+ HS P +HN AF N Y+ +D+ K + RT
Sbjct: 1 MERIDGHTLLIGLMAYPIRHSMSPTMHNNAFAKLGLNYAYLAFEIDNDKLEKAVDAIRTL 60
Query: 285 SGTDFAGFSVGIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISA 344
D G +V +P+K+ + D++ P AK GAVNT++ +G L GY TD + +
Sbjct: 61 ---DMRGSNVSMPNKQKIIPYLDKLDPAAKMAGAVNTVVND--NGVLTGYTTDGTGFMKS 115
Query: 345 IEDALRERQGINGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGARVI-IFNRN---Y 400
+ D +G++ I GK L GAGGAG +A A G + I IFN + +
Sbjct: 116 LAD-----EGLD--------IRGKKMTLAGAGGAGTPIAIQAALDGVKEISIFNLDDAQW 162
Query: 401 ERAKALADAVSGE-----ALHFEYLHEFFPEK---GMILANASAIGMEPNSDQSPVPKEA 452
+A+ + ++ E LH+ E F ++ I +A+ +GM+P D + V +
Sbjct: 163 AQAEKNVEIINRETDCKATLHYLEDKEDFKKEIASSYIYCDATGVGMKPLEDMTLVEDPS 222
Query: 453 LKAYEL-VFDAVYTPRNTRLLREAAEVGAT-VVSGVEMFIRQALGQFRLFTGGLAPEDFM 510
++ VFD VY PR T+L++ A E G V++G+ M + Q F+L+TG P D++
Sbjct: 223 WFHKDMIVFDTVYAPRETKLMKVAKEAGVDHVLNGLGMMLEQGAEAFKLWTGEDMPVDYI 282
Query: 511 RKLVLEQ 517
R+L+ +
Sbjct: 283 RELLFSE 289
>gi|418096456|ref|ZP_12733568.1| 3-dehydroquinate dehydratase, type I [Streptococcus pneumoniae
GA16531]
gi|353769141|gb|EHD49662.1| 3-dehydroquinate dehydratase, type I [Streptococcus pneumoniae
GA16531]
Length = 506
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 110/389 (28%), Positives = 184/389 (47%), Gaps = 42/389 (10%)
Query: 145 IACMQATGADVMKLEIAVDSITDLAPVFEMLTHCQVPLIALAVGSRGLISQLLGPKFGGF 204
+A M T DV+ L L P E +T +++G G +S++ G
Sbjct: 144 VAVMAHTEQDVLDLMNYTRGFKTLNPEQEYVT--------ISMGKVGKVSRITADVTGSS 195
Query: 205 LVYGSLGGKSVPGLPTLVSLKQVYQLE-HINPDTKIFGLVSNPVGHSKGPILHNPAFRHT 263
+ SL S PG +L S+K+ + ++ T++ +V+NP+ HS P +HN AF T
Sbjct: 196 WSFASLDEVSAPGQISLASMKKSGRFWMKLDGYTRLAAVVANPIKHSISPFIHNRAFEAT 255
Query: 264 RFNGIYVPMLVD--DVKEFFRTYSGTDFAGFSVGIPHKEPAVACCDEVHPLAKSIGAVNT 321
NG YV ++ D+ E G ++ +P+KE + D++ A+ IGAVNT
Sbjct: 256 ATNGAYVAWEIEASDLVETVANIRRYQMFGINLSMPYKEQVIPYLDKLSDEARLIGAVNT 315
Query: 322 IIRRPIDGKLVGYNTDCESAISAIEDALRERQGINGVASHTSPIAGKIFVLVGAGGAGRA 381
++ +G L+GYNTD + + S T I+GK L+GAGGA ++
Sbjct: 316 VVNE--NGNLIGYNTDGKGFFKCL-------------PSFT--ISGKKMTLLGAGGAAKS 358
Query: 382 LAFGAKSRG-ARVIIFNR--NYERAKALADAVSGEA------LHFEYLHEFFPE--KGMI 430
+ A G +++ +F R + E+ + D + + EY+ E + +
Sbjct: 359 ILAQAILDGVSQISVFVRSVSMEKTRPYLDKLQEQTGFKVDLCALEYVSELQARIAESDL 418
Query: 431 LANASAIGMEPNSDQSPVPKE-ALKAYELVFDAVYTPRNTRLLREAAEVGATVVSGVEMF 489
L NA+++GM+ S SPVP+ L LV D +Y P T L+ A G V+G+ M
Sbjct: 419 LVNATSVGMDGQS--SPVPENIVLPETLLVADIIYQPFETPFLKWARSQGNPAVNGLGML 476
Query: 490 IRQALGQFRLFTGGLAPEDFMRKLVLEQF 518
+ QA F+L+TG P + + + + E++
Sbjct: 477 LYQAAEAFQLWTGKEMPTEEIWQSLTEKY 505
>gi|284164650|ref|YP_003402929.1| shikimate 5-dehydrogenase [Haloterrigena turkmenica DSM 5511]
gi|284014305|gb|ADB60256.1| shikimate 5-dehydrogenase [Haloterrigena turkmenica DSM 5511]
Length = 271
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 111/292 (38%), Positives = 145/292 (49%), Gaps = 35/292 (11%)
Query: 238 KIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYV-----PMLVDDVKEFFRTYSGTD---F 289
+FGL+ NPVGHS P +H A+ YV P ++D G D
Sbjct: 4 DVFGLLGNPVGHSLSPPMHEAAYDELGLEARYVTFEPEPSAIEDA------IDGADALGI 57
Query: 290 AGFSVGIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDAL 349
AG +V IP K+ + C E LA IGAVNTI +G G+NTD A+ A+ D
Sbjct: 58 AGLNVTIPFKQDVLECV-EADELATRIGAVNTIDFTG-EGAPTGHNTDAVGALRALRD-- 113
Query: 350 RERQGINGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGARVIIFNRNYERAKALADA 409
H + G V+VGAGGAGRA+AFG GA V I NR A+ LAD
Sbjct: 114 -----------HGVSVDGARAVVVGAGGAGRAVAFGLADAGATVEIANRTASTARDLADE 162
Query: 410 V---SGEALHFEYLHEFFPEKGMILANASAIGMEPNSDQSPVPKEALKAYELVFDAVYTP 466
V +G L E L + + +L NA+++GME D++PVP +AL V DAVY P
Sbjct: 163 VPGATGHGLEDETLVDLLSDAD-VLVNATSVGME--EDETPVPADALHGDLAVLDAVYRP 219
Query: 467 RNTRLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRKLVLEQF 518
TRLLR+A GAT V G M + Q + F +TG AP D M + ++
Sbjct: 220 LETRLLRDATAAGATTVDGAWMLLYQGVEAFERWTGREAPVDAMNAALRDRL 271
>gi|384160214|ref|YP_005542287.1| shikimate 5-dehydrogenase [Bacillus amyloliquefaciens TA208]
gi|384165143|ref|YP_005546522.1| shikimate dehydrogenase [Bacillus amyloliquefaciens LL3]
gi|384169284|ref|YP_005550662.1| shikimate 5-dehydrogenase [Bacillus amyloliquefaciens XH7]
gi|328554302|gb|AEB24794.1| shikimate 5-dehydrogenase [Bacillus amyloliquefaciens TA208]
gi|328912698|gb|AEB64294.1| Shikimate dehydrogenase [Bacillus amyloliquefaciens LL3]
gi|341828563|gb|AEK89814.1| shikimate 5-dehydrogenase [Bacillus amyloliquefaciens XH7]
Length = 280
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 86/284 (30%), Positives = 139/284 (48%), Gaps = 22/284 (7%)
Query: 238 KIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLVD--DVKEFFRTYSGTDFAGFSVG 295
+++G++ NP+GHS P +HN A + NG Y V+ ++K+ G +V
Sbjct: 3 QLYGVIGNPIGHSMSPDIHNAALKDKNINGQYFAFQVEPHNLKDAVNGIKALGICGINVT 62
Query: 296 IPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALRERQGI 355
+PHK + DE+ AK +GAVNT+ R +L+GYNTD + ++ L +
Sbjct: 63 VPHKVAIMEHLDEIDESAKVLGAVNTVKRE--GDRLIGYNTDGDGFYKSLVKVLDK---- 116
Query: 356 NGVASHTSPIAGKIFVLVGAGGAGRAL-AFGAKSRGARVIIFNRNYERAKALADAV---- 410
PI+ +++GAGGA RA+ + + + NR E+A++L A
Sbjct: 117 --------PISELSILMIGAGGAARAIFTTIVRKEPKQFDVCNRTPEKAESLIAAAPSFQ 168
Query: 411 SGEALHFEYLHEFFPEKGMILANASAIGMEPNSDQSPVPKEALKAYELVFDAVYTPRNTR 470
AL E + +I+ + +++GM PN+D P+ E K +V D VY P T
Sbjct: 169 QKRALTLEEAENQLEQYDVII-HTTSVGMYPNTDAVPLSLERAKTGAIVCDIVYNPIQTA 227
Query: 471 LLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRKLV 514
L+EA + G T + G+ MF+ QA F+L+T MR +V
Sbjct: 228 FLKEAEKRGLTTLDGIGMFVEQAALAFKLWTEQEPDSGLMRTIV 271
>gi|390455054|ref|ZP_10240582.1| shikimate dehydrogenase [Paenibacillus peoriae KCTC 3763]
Length = 296
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 90/299 (30%), Positives = 145/299 (48%), Gaps = 33/299 (11%)
Query: 232 HINPDTKIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLV--DDVKEFFRTYSGTDF 289
I+ T++ GL++ P+GHS P +HN AF N Y+ V + ++E R +
Sbjct: 6 RIDGRTQLIGLLATPIGHSLSPAMHNLAFEKLGLNNAYMAFEVGNEQLEEVVRGLRALNI 65
Query: 290 AGFSVGIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDAL 349
G++V +P+K V DE+ AK GAVNT++ DGKL GY+TD + L
Sbjct: 66 RGYNVSMPNKTAIVQYLDELDDSAKFTGAVNTVVN--TDGKLKGYSTDGSGYVRN----L 119
Query: 350 RERQGINGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRG-ARVIIFNRN---YERAKA 405
RE H + GK LVG+GGA +A A G A + IF R+ + RA+
Sbjct: 120 RE---------HGIDLKGKKMTLVGSGGAATPIAIEAARAGLAEISIFARDDQFFARAEE 170
Query: 406 LADAVSGEALHFEYLHEFFP-----------EKGMILANASAIGMEPNSDQSPVPK-EAL 453
++ + H + +P I AN + +GM+P +S + L
Sbjct: 171 NVRIINEDMKHAQVKANIYPLEDQEQLRKEIRTSHIFANGTGVGMKPLEGKSVIEDVSML 230
Query: 454 KAYELVFDAVYTPRNTRLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRK 512
++ +V D VY+P ++L+ +A VGAT ++G+ M + Q F L+TG P ++++
Sbjct: 231 RSDLIVTDVVYSPAKSKLMEQAESVGATAINGLGMMLWQGALAFELWTGQEMPVSYIKE 289
>gi|389573017|ref|ZP_10163093.1| shikimate dehydrogenase [Bacillus sp. M 2-6]
gi|388427174|gb|EIL84983.1| shikimate dehydrogenase [Bacillus sp. M 2-6]
Length = 300
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 92/305 (30%), Positives = 149/305 (48%), Gaps = 34/305 (11%)
Query: 232 HINPDTKIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLV--DDVKEFFRTYSGTDF 289
+I+ TK+ GL++ P+GHS P +HN + T N Y+ V D+++
Sbjct: 8 NIDGKTKLVGLLATPIGHSLSPRMHNLGYTLTGINYAYLAFEVGNDELEAAVNGMKAMGA 67
Query: 290 AGFSVGIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDAL 349
AGF+V +P+K + DE+ AK A NT++ + DGKLVGYNTD +
Sbjct: 68 AGFNVSMPNKMKVLDYLDELDDSAKYTRASNTVVNK--DGKLVGYNTDGLGYVR------ 119
Query: 350 RERQGINGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGARVI-IFNRN---YERAKA 405
+ H +AG+ LVG+GGA +A G R I IF RN + +A+
Sbjct: 120 -------NLIEHGVELAGQKVTLVGSGGAATPIAIQLAQSGIREISIFARNDQYFVQAEE 172
Query: 406 LADAVSGEALHFEYLHEFFP-----------EKGMILANASAIGMEPNSDQSPVPK--EA 452
+ ++ E F FP + ILAN +++GM+P + S + +
Sbjct: 173 NVNYINNEMKSFGVKANIFPLEDKDAFRREVAESAILANGTSLGMKPLDELSIIDDTLDV 232
Query: 453 LKAYELVFDAVYTPRNTRLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRK 512
L+ +V D VY P+ T+LL +A E GA ++G+ M + Q ++LFTG P + +++
Sbjct: 233 LRKDLIVTDVVYNPQKTKLLAQAQEAGAKTINGLGMMLWQGALAYKLFTGEDMPVEQVKQ 292
Query: 513 LVLEQ 517
++ E
Sbjct: 293 ILFEN 297
>gi|448350577|ref|ZP_21539389.1| shikimate 5-dehydrogenase [Natrialba taiwanensis DSM 12281]
gi|445636146|gb|ELY89309.1| shikimate 5-dehydrogenase [Natrialba taiwanensis DSM 12281]
Length = 271
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 107/281 (38%), Positives = 140/281 (49%), Gaps = 23/281 (8%)
Query: 238 KIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPML--VDDVKEFFRTYSGTDFAGFSVG 295
+FGL+ NPVGHS P +H A+ F+ YV D++ + G +V
Sbjct: 2 DVFGLLGNPVGHSLSPPMHEAAYDELGFDARYVTFEPDSDELAAAIDGAAALGITGLNVT 61
Query: 296 IPHKEPAVACCDEVHPLAKSIGAVNTI-IRRPIDGKLVGYNTDCESAISAIEDALRERQG 354
IP K+ A+ E LA IGAVNTI + GYNTD A+ A LRE
Sbjct: 62 IPFKQDALDLV-EPDDLAARIGAVNTIDFADASTEQPTGYNTDAAGALRA----LRE--- 113
Query: 355 INGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGARVIIFNRNYERAKALADAV---S 411
H I V+VGAGGAGRA++F GA V I NR A LA V +
Sbjct: 114 ------HEVTIENATAVVVGAGGAGRAISFALSDAGADVAIANRTESTAHDLAADVPGAT 167
Query: 412 GEALHFEYLHEFFPEKGMILANASAIGMEPNSDQSPVPKEALKAYELVFDAVYTPRNTRL 471
G L + L + +L NA+++GME N+ +PVP +AL A +V DAVY P TRL
Sbjct: 168 GHDLADDTLDSLLTQAN-VLVNATSVGMEDNA--TPVPADALHAELVVMDAVYRPLETRL 224
Query: 472 LREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRK 512
LR+AA +GA V G M + Q + F L+T AP D M +
Sbjct: 225 LRDAAAIGAQTVDGAWMLLYQGVEAFELWTDRDAPVDEMNE 265
>gi|448282140|ref|ZP_21473429.1| shikimate 5-dehydrogenase [Natrialba magadii ATCC 43099]
gi|445576774|gb|ELY31222.1| shikimate 5-dehydrogenase [Natrialba magadii ATCC 43099]
Length = 278
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 112/288 (38%), Positives = 140/288 (48%), Gaps = 30/288 (10%)
Query: 238 KIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPM--LVDDVKEFFRTYSGTDFAGFSVG 295
+FGL+ NPVGHS P +H A+ ++ YV D++ G +V
Sbjct: 2 DVFGLLGNPVGHSLSPPMHEAAYDELAYDARYVTFEPAPTDLETAITGADALGITGLNVT 61
Query: 296 IPHKEPAVACCDEVHP--LAKSIGAVNTIIRRP------IDGKLVGYNTDCESAISAIED 347
IP K+ V D V P LA IGAVNTI P G+ G+NTD A+ A
Sbjct: 62 IPFKQD-VLDLDLVEPDELATRIGAVNTIDFEPDSSRSNSSGRATGHNTDAAGALRA--- 117
Query: 348 ALRERQGINGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGARVIIFNRNYERAKALA 407
LRE H IAG V+VGAGGAGRA++F GA V I NR A LA
Sbjct: 118 -LRE---------HDVTIAGADAVVVGAGGAGRAISFALADAGATVAIANRTESTAHDLA 167
Query: 408 DAV---SGEALHFEYLHEFFPEKGMILANASAIGMEPNSDQSPVPKEALKAYELVFDAVY 464
V +G L L E +L NA+++GME D +PVP +AL V DAVY
Sbjct: 168 ADVPDATGHGLDGTVLESLLAEAD-VLVNATSVGME--EDATPVPADALHGELTVMDAVY 224
Query: 465 TPRNTRLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRK 512
P TRLLR+AA GAT V G M + Q + F L+TG AP M +
Sbjct: 225 QPLETRLLRDAAAAGATTVDGAWMLLFQGVEAFELWTGQDAPVGVMNE 272
>gi|289582440|ref|YP_003480906.1| shikimate 5-dehydrogenase [Natrialba magadii ATCC 43099]
gi|289531993|gb|ADD06344.1| shikimate 5-dehydrogenase [Natrialba magadii ATCC 43099]
Length = 280
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 112/288 (38%), Positives = 140/288 (48%), Gaps = 30/288 (10%)
Query: 238 KIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPM--LVDDVKEFFRTYSGTDFAGFSVG 295
+FGL+ NPVGHS P +H A+ ++ YV D++ G +V
Sbjct: 4 DVFGLLGNPVGHSLSPPMHEAAYDELAYDARYVTFEPAPTDLETAITGADALGITGLNVT 63
Query: 296 IPHKEPAVACCDEVHP--LAKSIGAVNTIIRRP------IDGKLVGYNTDCESAISAIED 347
IP K+ V D V P LA IGAVNTI P G+ G+NTD A+ A
Sbjct: 64 IPFKQD-VLDLDLVEPDELATRIGAVNTIDFEPDSSRSNSSGRATGHNTDAAGALRA--- 119
Query: 348 ALRERQGINGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGARVIIFNRNYERAKALA 407
LRE H IAG V+VGAGGAGRA++F GA V I NR A LA
Sbjct: 120 -LRE---------HDVTIAGADAVVVGAGGAGRAISFALADAGATVAIANRTESTAHDLA 169
Query: 408 DAV---SGEALHFEYLHEFFPEKGMILANASAIGMEPNSDQSPVPKEALKAYELVFDAVY 464
V +G L L E +L NA+++GME D +PVP +AL V DAVY
Sbjct: 170 ADVPDATGHGLDGTVLESLLAEAD-VLVNATSVGME--EDATPVPADALHGELTVMDAVY 226
Query: 465 TPRNTRLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRK 512
P TRLLR+AA GAT V G M + Q + F L+TG AP M +
Sbjct: 227 QPLETRLLRDAAAAGATTVDGAWMLLFQGVEAFELWTGQDAPVGVMNE 274
>gi|322371081|ref|ZP_08045633.1| shikimate 5-dehydrogenase [Haladaptatus paucihalophilus DX253]
gi|320549071|gb|EFW90733.1| shikimate 5-dehydrogenase [Haladaptatus paucihalophilus DX253]
Length = 267
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 97/274 (35%), Positives = 134/274 (48%), Gaps = 17/274 (6%)
Query: 238 KIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLVDDVKEFFRTYSGTDFAGFSVGIP 297
++GL+ NPVGHS P +H A+ + YV + + + +G +V IP
Sbjct: 2 DVYGLLGNPVGHSLSPPMHEVAYDELDMDARYVTFEPEAIGPAIEGANALGISGLNVTIP 61
Query: 298 HKEPAVACCDEVHPLAKSIGAVNTI-IRRPIDGKLVGYNTDCESAISAIEDALRERQGIN 356
KE A++ E LA+ IGAVNT+ P D G+NTD E A A E R G++
Sbjct: 62 FKEDALSHV-EPDSLAEHIGAVNTVDFSAPDDSVPTGHNTDAEGARRAFE-----RHGVS 115
Query: 357 GVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGARVIIFNRNYERAKALADAVSGEALH 416
+ + A+AF GA V I NR RA++LA V G + H
Sbjct: 116 RDGASAVVVGAGGAAR--------AIAFMLADDGATVEIANRTVSRAESLAADVDGASAH 167
Query: 417 FEYLHEFFPEKGMILANASAIGMEPNSDQSPVPKEALKAYELVFDAVYTPRNTRLLREAA 476
+L NA+++GME SD+SPVP AL V DAVY+P +TRLLREA+
Sbjct: 168 GLDELPGLVSGADVLVNATSVGME--SDESPVPATALHGDLAVMDAVYSPLDTRLLREAS 225
Query: 477 EVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFM 510
GAT + G M + Q + F L+TG AP + M
Sbjct: 226 ARGATTIDGAWMLLFQGVAAFELWTGKDAPVERM 259
>gi|84489456|ref|YP_447688.1| hypothetical protein Msp_0647 [Methanosphaera stadtmanae DSM 3091]
gi|121724206|sp|Q2NGK8.1|AROE_METST RecName: Full=Shikimate dehydrogenase
gi|84372775|gb|ABC57045.1| AroE [Methanosphaera stadtmanae DSM 3091]
Length = 283
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 88/294 (29%), Positives = 148/294 (50%), Gaps = 30/294 (10%)
Query: 237 TKIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVP--MLVDDVKEFFRTYSGTDFAGFSV 294
T I G++ +P+ HS P +HN A++ + YVP + V+++K + + G +V
Sbjct: 6 TLITGVIGHPIEHSFSPPMHNNAYKLMNMDYKYVPFHVEVENLKHVITSAKTLNIKGLNV 65
Query: 295 GIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALRERQG 354
IPHK + DE+ A+ IGAVNTI + DG GYNTD AI +IE
Sbjct: 66 TIPHKTTIIPYLDEIDETAEKIGAVNTINFK--DGIAKGYNTDGIGAIVSIE-------- 115
Query: 355 INGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRG-ARVIIFNRNYERAKALADAVSGE 413
+TS + K +++GAGGA +A+ F ++ ++I+ NR+ + A+ L + +
Sbjct: 116 -----KYTS-LKDKNIMIIGAGGASKAITFTLLNKNINQLIVANRSKDNAQKLITNLKNQ 169
Query: 414 ALHFEYLHEFFPEKGM--------ILANASAIGMEPNSDQSP-VPKEALKAYELVFDAVY 464
+FE + +F K I+ N + IGM P + +P + + + + V D +Y
Sbjct: 170 T-NFENI-DFINIKKTDNVIDDVDIIINTTPIGMYPKDEVAPPIKTDKISSKHTVMDIIY 227
Query: 465 TPRNTRLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRKLVLEQF 518
P T+LL+++ + GAT + G M I Q + F +FTG + K +L+
Sbjct: 228 NPLETQLLKQSKKQGATTIPGTHMLINQGIKAFEIFTGKTPSYESFEKPLLKHL 281
>gi|374585221|ref|ZP_09658313.1| shikimate dehydrogenase [Leptonema illini DSM 21528]
gi|373874082|gb|EHQ06076.1| shikimate dehydrogenase [Leptonema illini DSM 21528]
Length = 292
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 98/302 (32%), Positives = 145/302 (48%), Gaps = 39/302 (12%)
Query: 230 LEHINPDTKIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLVDDVKEFF-RTYSGTD 288
++ I + +FG+ NPV HS PILHN F FNG+YVP VD F +
Sbjct: 1 MKGITGQSAVFGIFGNPVSHSISPILHNRTFEKMGFNGVYVPFCVDQTGPFLKKAVLHMG 60
Query: 289 FAGFSVGIPHKEPAVACCDEVHPLAKSIGAVNT-IIRRPIDGKLV-GYNTDCESAISAIE 346
+G SV IPHK A D+ L++ GA NT ++R +G+++ +NTD A+ A++
Sbjct: 61 LSGLSVTIPHKLWAAKAADQRDALSELTGAANTLLVRETRNGRILSAHNTDGPGAMRALQ 120
Query: 347 DALRERQGINGVASHTSPIAGKIFVLVGAGGAGRA------LAFGAKSRGARVIIFNRNY 400
A+ + + G+ V+ G GG+ RA LA G K +V + RN
Sbjct: 121 TAVPD-------------LKGRRVVIAGYGGSARAIVGQLLLASGVK----QVAVTGRNM 163
Query: 401 ERAKALADAVSGEALHFEYLHEFFPEK--------GMILANASAIGMEPNSDQSPVPKEA 452
+ KA + + + ++ + P K IL N + +GM+ PVP+
Sbjct: 164 PKIKAFIRSFTKK--RPDWAAKLIPLKEEALLDYEAHILINTTPLGMKGFDLSLPVPESF 221
Query: 453 LKAYELVFDAVYTPRNTRLLREAAEVGATVVSGVEMFIRQALGQFRLFTG---GLAPEDF 509
L+ V D VY P T +L A + AT+V G M + QA+ QF LFTG G E+F
Sbjct: 222 LRPGLAVMDIVYRPEMTPILIAAKKNRATIVPGYWMLLYQAVLQFELFTGMKAGPDVENF 281
Query: 510 MR 511
MR
Sbjct: 282 MR 283
>gi|357051701|ref|ZP_09112869.1| shikimate 5-dehydrogenase [Enterococcus saccharolyticus 30_1]
gi|355379429|gb|EHG26591.1| shikimate 5-dehydrogenase [Enterococcus saccharolyticus 30_1]
Length = 289
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 90/298 (30%), Positives = 140/298 (46%), Gaps = 32/298 (10%)
Query: 233 INPDTKIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLVD--DVKEFFRTYSGTDFA 290
I T++ L + P HS P +HN +F + + +Y+ VD + ++ D
Sbjct: 5 ITGHTRLAALFAKPAKHSISPAMHNLSFEDQKVDAVYLAFDVDPESLAASIQSIRQLDLL 64
Query: 291 GFSVGIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALR 350
G ++ +PHK AV DE+ P A+ IGA+NTI+ G L+G+NTD + A+ D
Sbjct: 65 GVNLSMPHKMAAVPLVDELSPAAELIGAINTIVNHK--GHLIGHNTDGIGFMRALGDI-- 120
Query: 351 ERQGINGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGARVI-IFNRNYE-------R 402
I G ++GAGGA A+ A G I +FNRN E +
Sbjct: 121 -----------EVSIIGGTMTVIGAGGAATAIISQAALDGVETIHVFNRNDEFYPVIESK 169
Query: 403 AKALADAVS-----GEALHFEYLHEFFPEKGMILANASAIGMEPNSDQSPVPKEALKAYE 457
+ +A A + G+ + L E +L NA+ +GM+P D SP+ +
Sbjct: 170 LQQIAAATTCNITLGDLDDQQALGLAIKES-QLLVNATGVGMKPQEDASPLKDRGMLRES 228
Query: 458 L-VFDAVYTPRNTRLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRKLV 514
L V+D +Y PR TRLLR+A GA +G+ M + Q F L+T P + ++ L+
Sbjct: 229 LAVYDVIYNPRETRLLRDAKAAGAKTANGLSMLLYQGAAAFELWTDKKMPIEKVKTLI 286
>gi|347753134|ref|YP_004860699.1| Shikimate dehydrogenase [Bacillus coagulans 36D1]
gi|347585652|gb|AEP01919.1| Shikimate dehydrogenase [Bacillus coagulans 36D1]
Length = 280
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 92/285 (32%), Positives = 143/285 (50%), Gaps = 23/285 (8%)
Query: 239 IFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLV--DDVKEFFRTYSGTDFAGFSVGI 296
++G++ +P+ HS P +HN AFR + Y V ++++ AGF+V I
Sbjct: 4 LYGVIGDPIAHSLSPAMHNEAFRALGIDADYHAFHVTPENLEAAVNGMKAIGVAGFNVTI 63
Query: 297 PHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALRERQGIN 356
PHK+ + DE+ LA++IGAVNT++R P GYNTD + A L+E G
Sbjct: 64 PHKQAIMPYLDEIDLLAETIGAVNTVVRTP--HGWAGYNTDGPGFMQA----LKEESG-- 115
Query: 357 GVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGARVI-IFNRNYERAKALAD----AVS 411
I+G+ +++GAGGA RA+ + GA + + NR ++A+ + D
Sbjct: 116 ------RVISGEKVLVIGAGGAARAIYYTLCREGAVTVDLCNRTVKKAEEMRDESPFPCP 169
Query: 412 GEALHFEYLHEFFPEKGMILANASAIGMEPNSDQSPVPKEALKAYELVFDAVYTPRNTRL 471
+ L + E E +I+ S IGM PN+D P+ L V D +Y P T+
Sbjct: 170 SKVLTLKEAEEQLGEYTLIVQTTS-IGMHPNTDAQPLSVRNLNPDAFVSDIIYNPFETKF 228
Query: 472 LREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRKLVLE 516
L+EA + GA V +G+ MFI Q F +T G+ P+ K V+E
Sbjct: 229 LKEAKKRGARVQNGLGMFIYQGAIAFEKWT-GVKPDTRKMKNVVE 272
>gi|427705993|ref|YP_007048370.1| shikimate dehydrogenase [Nostoc sp. PCC 7107]
gi|427358498|gb|AFY41220.1| shikimate dehydrogenase [Nostoc sp. PCC 7107]
Length = 290
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 80/290 (27%), Positives = 146/290 (50%), Gaps = 29/290 (10%)
Query: 237 TKIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLV--DDVKEFFRTYSGTDFAGFSV 294
T++ G++ +PV HS P++HN A + IY+P + ++++ ++ GFSV
Sbjct: 8 TELLGVIGHPVEHSLSPVMHNAALAALGVDYIYLPFPIAPENLQIAIAGFATIGVTGFSV 67
Query: 295 GIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALRERQG 354
IPHK+ + E+ +A++IGAVNT+ R+ + + VG NTD E I+ ++ ++
Sbjct: 68 TIPHKQAIMPLLSEITLVAQAIGAVNTVTRK--NQQWVGTNTDIEGFIAPLQTTYQQDW- 124
Query: 355 INGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRG-ARVIIFNRNYERAKALADAVSGE 413
+ K+ +++G GGA RA+ G G A + + RN +R D+
Sbjct: 125 -----------SQKVAIILGNGGAARAVVAGCYQLGFAEIHVVGRNEQRLIEFRDSWGSS 173
Query: 414 AL-------HFEYLHEFFPEKGMILANASAIGMEPNSDQSPVPK---EALKAYELVFDAV 463
+ + L + P+ + L N + +GM PN D SP+ L + + +D +
Sbjct: 174 PIAEKLQVHTWPTLVKLIPQANL-LVNTTPMGMYPNVDDSPLTAAEMNDLPSGAIAYDLI 232
Query: 464 YTPRNTRLLREAAEVGATVVSGVEMFIRQALGQFRLFTGG-LAPEDFMRK 512
Y P+ T+ L++A + GA V+ G+EM ++Q +++ P D MR+
Sbjct: 233 YIPQPTKFLQQAEKQGAIVIDGLEMLVQQGAAALKIWLQQETVPVDVMRQ 282
>gi|206580594|ref|YP_002240458.1| shikimate 5-dehydrogenase [Klebsiella pneumoniae 342]
gi|288937158|ref|YP_003441217.1| shikimate 5-dehydrogenase [Klebsiella variicola At-22]
gi|290512580|ref|ZP_06551946.1| shikimate 5-dehydrogenase [Klebsiella sp. 1_1_55]
gi|206569652|gb|ACI11428.1| putative shikimate 5-dehydrogenase [Klebsiella pneumoniae 342]
gi|288891867|gb|ADC60185.1| shikimate 5-dehydrogenase [Klebsiella variicola At-22]
gi|289774921|gb|EFD82923.1| shikimate 5-dehydrogenase [Klebsiella sp. 1_1_55]
Length = 287
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 91/300 (30%), Positives = 147/300 (49%), Gaps = 30/300 (10%)
Query: 231 EHINPDTKIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLV--DDVKEFFRTYSGTD 288
E I T++ GL++ P+ HS P +HN AF H + +Y+ V ++K+ + +
Sbjct: 3 ERITGHTELIGLIATPIRHSMSPTMHNEAFAHLGLDYVYLAFEVGNQELKDVVQGFRAMK 62
Query: 289 FAGFSVGIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDA 348
GF+V +P+K D++ P A+ +GAVNT++ DG L G+ TD + A+ +A
Sbjct: 63 LRGFNVSMPNKTEICQYLDKLSPAAQLVGAVNTVVND--DGVLTGHITDGTGYMRALSEA 120
Query: 349 LRERQGINGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGARVI-IFNR------NYE 401
GI+ I GK ++GAGGA AL A G + I IFNR N E
Sbjct: 121 -----GID--------IIGKKMTVLGAGGAATALCVQAALDGVKAISIFNRRDKFFANAE 167
Query: 402 RAKALADAVSGEALHFEYLHEFFP-----EKGMILANASAIGMEPNSDQSPVPKEA-LKA 455
A + +H L + + +IL NA+ +GM+P Q +P ++ L+
Sbjct: 168 ETVAKIRNNTNCEIHLFDLDDHDKLRAEIDSSVILTNATGVGMKPFEGQMLLPNDSFLRP 227
Query: 456 YELVFDAVYTPRNTRLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRKLVL 515
+V D VY PR T LL A + G ++G+ M + Q F ++TG P D+++ ++
Sbjct: 228 DLIVSDVVYNPRKTHLLEVAEKKGCRTLNGLGMMLWQGARAFEIWTGKQMPVDYIKSILF 287
>gi|390453029|ref|ZP_10238557.1| shikimate 5-dehydrogenase [Paenibacillus peoriae KCTC 3763]
Length = 289
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 93/297 (31%), Positives = 141/297 (47%), Gaps = 40/297 (13%)
Query: 239 IFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLV--DDVKEFFRTYSGTDFAGFSVGI 296
+ G++ +P+ HSK P++H A + G +VP+ V D +++ + F G +V I
Sbjct: 15 LLGVLGDPIKHSKSPLMHKIALQVAGIEGDFVPLHVKPDQLEDAMKGIRALHFRGVNVTI 74
Query: 297 PHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALRERQGIN 356
PHK + DE+ A+ IGAVNTI+ +G+L GYNTD + + L+E +
Sbjct: 75 PHKVEVMKYLDEIDEGARLIGAVNTIVND--NGRLKGYNTDGIGYVRS----LKEETSVE 128
Query: 357 GVASHTSPIAGKIFVLVGAGGAGRALAFGA-KSRGARVIIFNRNYERAKALADAVSGEAL 415
+ G ++GAGGA R + + + VII NR ++A+ LA
Sbjct: 129 --------LKGARIAVLGAGGAARGVIHALLEEQPESVIILNRTRDKAEQLAQ------- 173
Query: 416 HFEYLHEFFPEKGM-------------ILANASAIGMEPNSDQSPVPKEALKAYELVFDA 462
E+ E P KG +L N +++GM P SD+ P+ + +V D
Sbjct: 174 --EWTTESIPVKGYANDEAKNVLATVDVLINTTSVGMSPLSDELPLETSLIPKGIIVSDL 231
Query: 463 VYTPRNTRLLREAAEV-GATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRKLVLEQF 518
+Y P TRLLRE+ E G V G+ MF+ Q F FTG + D MR VL
Sbjct: 232 IYNPLETRLLRESREQRGCIVHGGLGMFVYQGAVAFEYFTGVVPAVDQMRAAVLRSL 288
>gi|433592454|ref|YP_007281950.1| shikimate 5-dehydrogenase [Natrinema pellirubrum DSM 15624]
gi|433307234|gb|AGB33046.1| shikimate 5-dehydrogenase [Natrinema pellirubrum DSM 15624]
Length = 269
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 108/279 (38%), Positives = 140/279 (50%), Gaps = 23/279 (8%)
Query: 238 KIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPML--VDDVKEFFRTYSGTDFAGFSVG 295
++GL+ NPVGHS P +H A+ YV DD+ AG +V
Sbjct: 4 DVYGLLGNPVGHSLSPPMHEAAYDELGLEARYVTFEPDQDDLAAAIEGADALGIAGLNVT 63
Query: 296 IPHKEPAVACCDEVHP--LAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALRERQ 353
IP K+ A+ V P LA IGAVNTI G GYNTD A+ A+ D
Sbjct: 64 IPFKQEALEI---VAPEDLATRIGAVNTIDFSG-SGPPTGYNTDAVGALRALRD------ 113
Query: 354 GINGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGARVIIFNRNYERAKALADAVSGE 413
H + V+VGAGGAGRA+AFG GA V I NR +A+ LA+AV
Sbjct: 114 -------HDVDLEDARAVVVGAGGAGRAVAFGLADAGATVAIANRTEPKARQLAEAVPRA 166
Query: 414 ALHFEYLHEFFPEKGMILANASAIGMEPNSDQSPVPKEALKAYELVFDAVYTPRNTRLLR 473
+ H E + +L NA+++GME D +PVP +AL V DAVY P TRLLR
Sbjct: 167 SGHGLAALERLLAEADVLVNATSVGME--EDSTPVPADALHGDLAVLDAVYQPLETRLLR 224
Query: 474 EAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRK 512
+AAE GAT V G M + Q + F ++TG AP + M +
Sbjct: 225 DAAEAGATTVDGAWMLLYQGVEAFEIWTGRDAPVEAMNE 263
>gi|145577903|gb|ABP82670.1| shikimate 5-dehydrogenase [Bacillus mycoides]
Length = 238
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 84/251 (33%), Positives = 129/251 (51%), Gaps = 22/251 (8%)
Query: 250 SKGPILHNPAFRHTRFNGIYVPMLVDD--VKEFFRTYSGTDFAGFSVGIPHKEPAVACCD 307
S P++HN AF H + Y LV++ + E + +GF+V PHK + D
Sbjct: 1 SLSPVMHNDAFEHLNMDAHYHAFLVEEEALGEAVKGLKALGISGFNVTTPHKVAIMEYLD 60
Query: 308 EVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALRERQGINGVASHTSPIAG 367
+ PLA+ IGAVNT++ R DGKL+GYNTD + A++ + P+
Sbjct: 61 GIAPLARQIGAVNTVVHR--DGKLIGYNTDGIGFVRALQSISED------------PLQE 106
Query: 368 KIFVLVGAGGAGRALAFGAKSRGARVI-IFNRNYERAKALADA----VSGEALHFEYLHE 422
K +L+GAGGA RA+ F G + I I NR ++AK L V+ AL E E
Sbjct: 107 KRILLIGAGGASRAIYFSLADVGVKEIDIANRTRDKAKNLISGCMANVNSHALSLECAAE 166
Query: 423 FFPEKGMILANASAIGMEPNSDQSPVPKEALKAYELVFDAVYTPRNTRLLREAAEVGATV 482
E +I+ + IGM P+ + +P+ + K +V D +Y P T++L +A E GA +
Sbjct: 167 NQGEYDIII-QTTTIGMHPHVEYTPLEIRSSKQGTIVSDIIYNPFETKILGDAKEQGAII 225
Query: 483 VSGVEMFIRQA 493
+G++MF+ Q
Sbjct: 226 QNGIDMFVYQG 236
>gi|448366257|ref|ZP_21554511.1| shikimate 5-dehydrogenase [Natrialba aegyptia DSM 13077]
gi|445654866|gb|ELZ07717.1| shikimate 5-dehydrogenase [Natrialba aegyptia DSM 13077]
Length = 271
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 110/281 (39%), Positives = 140/281 (49%), Gaps = 23/281 (8%)
Query: 238 KIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLVD--DVKEFFRTYSGTDFAGFSVG 295
+FGL+ NPVGHS P +H A+ F+ YV D D+ + G +V
Sbjct: 2 DVFGLLGNPVGHSLSPPMHEAAYDELGFDARYVTFEPDPDDLAAAIDGAAALGITGLNVT 61
Query: 296 IPHKEPAVACCDEVHPLAKSIGAVNTI-IRRPIDGKLVGYNTDCESAISAIEDALRERQG 354
IP K+ A+ E LA IGAVNTI + GYNTD A+ A LRE
Sbjct: 62 IPFKQDALDLV-EPDDLAARIGAVNTIDFSNSAAEQPTGYNTDAAGALRA----LRE--- 113
Query: 355 INGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGARVIIFNRNYERAKALADAV---S 411
H I V+VGAGGAGRA++F GA V I NR A LAD V +
Sbjct: 114 ------HEVTIENAAAVVVGAGGAGRAISFALSDAGADVAIANRTESTAHDLADDVPGAT 167
Query: 412 GEALHFEYLHEFFPEKGMILANASAIGMEPNSDQSPVPKEALKAYELVFDAVYTPRNTRL 471
G L + L + +L NA+++GME D + VP +AL A +V DAVY P TRL
Sbjct: 168 GHDLADDTLDSLLAQAD-VLVNATSVGME--DDATLVPADALHAELVVMDAVYRPLETRL 224
Query: 472 LREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRK 512
LR+AA VGA V G M + Q + F L+TG AP D M +
Sbjct: 225 LRDAAAVGARTVDGAWMLLYQGVEAFELWTGRDAPVDEMNE 265
>gi|448395763|ref|ZP_21568857.1| shikimate 5-dehydrogenase [Haloterrigena salina JCM 13891]
gi|445660344|gb|ELZ13140.1| shikimate 5-dehydrogenase [Haloterrigena salina JCM 13891]
Length = 269
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 109/289 (37%), Positives = 143/289 (49%), Gaps = 29/289 (10%)
Query: 238 KIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYV-----PMLVDDVKEFFRTYSGTDFAGF 292
+FGL+ NPVGHS P +H A+ YV P ++D + AG
Sbjct: 2 DVFGLLGNPVGHSLSPPMHEAAYDELGLEARYVTFEPEPSAIEDAIDGAEALG---IAGL 58
Query: 293 SVGIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALRER 352
+V IP K + C E LA IGAVNTI +G G+NTD A+ A+ D
Sbjct: 59 NVTIPFKRDVLECV-EADELATRIGAVNTIDFTG-EGAPTGHNTDAVGALRALRD----- 111
Query: 353 QGINGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGARVIIFNRNYERAKALADAV-- 410
H + G V+VGAGGAGRA+AFG GA V I NR A+ LAD V
Sbjct: 112 --------HGVTVDGARAVVVGAGGAGRAVAFGLADAGATVEIANRTASTARELADEVPG 163
Query: 411 -SGEALHFEYLHEFFPEKGMILANASAIGMEPNSDQSPVPKEALKAYELVFDAVYTPRNT 469
+G L E L + + +L NA+++GME D++PVP +AL V DAVY P T
Sbjct: 164 ATGHGLENETLVDLLSDAD-VLVNATSVGME--EDETPVPADALHGDLAVLDAVYQPLET 220
Query: 470 RLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRKLVLEQF 518
RLLR+A GAT V G M + Q + F +TG AP D M + ++
Sbjct: 221 RLLRDATAAGATTVDGAWMLLYQGVEAFERWTGREAPVDAMNAALRDRL 269
>gi|152968656|ref|YP_001333765.1| shikimate 5-dehydrogenase [Klebsiella pneumoniae subsp. pneumoniae
MGH 78578]
gi|262044888|ref|ZP_06017930.1| shikimate dehydrogenase [Klebsiella pneumoniae subsp.
rhinoscleromatis ATCC 13884]
gi|330012030|ref|ZP_08307247.1| shikimate dehydrogenase [Klebsiella sp. MS 92-3]
gi|365142635|ref|ZP_09347751.1| shikimate dehydrogenase [Klebsiella sp. 4_1_44FAA]
gi|378976949|ref|YP_005225090.1| shikimate 5-dehydrogenase [Klebsiella pneumoniae subsp. pneumoniae
HS11286]
gi|386033134|ref|YP_005953047.1| shikimate 5-dehydrogenase [Klebsiella pneumoniae KCTC 2242]
gi|419973485|ref|ZP_14488909.1| shikimate 5-dehydrogenase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH1]
gi|419980108|ref|ZP_14495395.1| shikimate 5-dehydrogenase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH2]
gi|419985021|ref|ZP_14500164.1| shikimate 5-dehydrogenase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH4]
gi|419990105|ref|ZP_14505078.1| shikimate 5-dehydrogenase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH5]
gi|419995985|ref|ZP_14510789.1| shikimate 5-dehydrogenase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH6]
gi|420003092|ref|ZP_14517740.1| shikimate 5-dehydrogenase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH7]
gi|420007859|ref|ZP_14522351.1| shikimate 5-dehydrogenase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH8]
gi|420013830|ref|ZP_14528139.1| shikimate 5-dehydrogenase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH9]
gi|420019141|ref|ZP_14533335.1| shikimate 5-dehydrogenase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH10]
gi|420024633|ref|ZP_14538645.1| shikimate 5-dehydrogenase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH11]
gi|420031626|ref|ZP_14545446.1| shikimate 5-dehydrogenase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH12]
gi|420037930|ref|ZP_14551581.1| shikimate 5-dehydrogenase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH14]
gi|420042184|ref|ZP_14555678.1| shikimate 5-dehydrogenase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH16]
gi|420048366|ref|ZP_14561680.1| shikimate 5-dehydrogenase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH17]
gi|420053592|ref|ZP_14566769.1| shikimate 5-dehydrogenase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH18]
gi|420059464|ref|ZP_14572471.1| shikimate 5-dehydrogenase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH19]
gi|420065185|ref|ZP_14577992.1| shikimate 5-dehydrogenase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH20]
gi|420073114|ref|ZP_14585744.1| shikimate 5-dehydrogenase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH21]
gi|420075986|ref|ZP_14588460.1| shikimate 5-dehydrogenase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH22]
gi|420084181|ref|ZP_14596446.1| shikimate 5-dehydrogenase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH23]
gi|421909952|ref|ZP_16339747.1| Shikimate/quinate 5-dehydrogenase I beta [Klebsiella pneumoniae
subsp. pneumoniae ST258-K26BO]
gi|421919298|ref|ZP_16348801.1| Shikimate/quinate 5-dehydrogenase I beta [Klebsiella pneumoniae
subsp. pneumoniae ST258-K28BO]
gi|424828935|ref|ZP_18253663.1| putative shikimate 5-dehydrogenase [Klebsiella pneumoniae subsp.
pneumoniae Ecl8]
gi|425078403|ref|ZP_18481506.1| shikimate dehydrogenase [Klebsiella pneumoniae subsp. pneumoniae
WGLW1]
gi|425079840|ref|ZP_18482937.1| shikimate dehydrogenase [Klebsiella pneumoniae subsp. pneumoniae
WGLW2]
gi|425089035|ref|ZP_18492128.1| shikimate dehydrogenase [Klebsiella pneumoniae subsp. pneumoniae
WGLW3]
gi|425089958|ref|ZP_18493043.1| shikimate dehydrogenase [Klebsiella pneumoniae subsp. pneumoniae
WGLW5]
gi|428151081|ref|ZP_18998826.1| Shikimate/quinate 5-dehydrogenase I beta [Klebsiella pneumoniae
subsp. pneumoniae ST512-K30BO]
gi|428931502|ref|ZP_19005097.1| shikimate 5-dehydrogenase [Klebsiella pneumoniae JHCK1]
gi|428938468|ref|ZP_19011595.1| shikimate 5-dehydrogenase [Klebsiella pneumoniae VA360]
gi|449051289|ref|ZP_21731888.1| shikimate 5-dehydrogenase [Klebsiella pneumoniae hvKP1]
gi|150953505|gb|ABR75535.1| shikimate 5-dehydrogenase [Klebsiella pneumoniae subsp. pneumoniae
MGH 78578]
gi|259037615|gb|EEW38844.1| shikimate dehydrogenase [Klebsiella pneumoniae subsp.
rhinoscleromatis ATCC 13884]
gi|328534019|gb|EGF60671.1| shikimate dehydrogenase [Klebsiella sp. MS 92-3]
gi|339760262|gb|AEJ96482.1| shikimate 5-dehydrogenase [Klebsiella pneumoniae KCTC 2242]
gi|363651417|gb|EHL90485.1| shikimate dehydrogenase [Klebsiella sp. 4_1_44FAA]
gi|364516360|gb|AEW59488.1| shikimate 5-dehydrogenase [Klebsiella pneumoniae subsp. pneumoniae
HS11286]
gi|397347024|gb|EJJ40134.1| shikimate 5-dehydrogenase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH2]
gi|397348124|gb|EJJ41226.1| shikimate 5-dehydrogenase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH1]
gi|397353005|gb|EJJ46082.1| shikimate 5-dehydrogenase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH4]
gi|397366106|gb|EJJ58725.1| shikimate 5-dehydrogenase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH6]
gi|397367720|gb|EJJ60329.1| shikimate 5-dehydrogenase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH5]
gi|397370399|gb|EJJ62982.1| shikimate 5-dehydrogenase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH7]
gi|397379152|gb|EJJ71350.1| shikimate 5-dehydrogenase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH9]
gi|397383945|gb|EJJ76072.1| shikimate 5-dehydrogenase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH8]
gi|397389307|gb|EJJ81249.1| shikimate 5-dehydrogenase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH10]
gi|397398570|gb|EJJ90232.1| shikimate 5-dehydrogenase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH11]
gi|397399773|gb|EJJ91423.1| shikimate 5-dehydrogenase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH12]
gi|397404887|gb|EJJ96373.1| shikimate 5-dehydrogenase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH14]
gi|397415554|gb|EJK06739.1| shikimate 5-dehydrogenase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH17]
gi|397416833|gb|EJK08003.1| shikimate 5-dehydrogenase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH16]
gi|397423820|gb|EJK14737.1| shikimate 5-dehydrogenase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH18]
gi|397432272|gb|EJK22936.1| shikimate 5-dehydrogenase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH20]
gi|397435462|gb|EJK26077.1| shikimate 5-dehydrogenase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH19]
gi|397438255|gb|EJK28767.1| shikimate 5-dehydrogenase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH21]
gi|397447948|gb|EJK38133.1| shikimate 5-dehydrogenase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH22]
gi|397450431|gb|EJK40536.1| shikimate 5-dehydrogenase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH23]
gi|405590264|gb|EKB63798.1| shikimate dehydrogenase [Klebsiella pneumoniae subsp. pneumoniae
WGLW1]
gi|405600173|gb|EKB73340.1| shikimate dehydrogenase [Klebsiella pneumoniae subsp. pneumoniae
WGLW3]
gi|405606765|gb|EKB79735.1| shikimate dehydrogenase [Klebsiella pneumoniae subsp. pneumoniae
WGLW2]
gi|405614522|gb|EKB87221.1| shikimate dehydrogenase [Klebsiella pneumoniae subsp. pneumoniae
WGLW5]
gi|410116082|emb|CCM82372.1| Shikimate/quinate 5-dehydrogenase I beta [Klebsiella pneumoniae
subsp. pneumoniae ST258-K26BO]
gi|410118329|emb|CCM91426.1| Shikimate/quinate 5-dehydrogenase I beta [Klebsiella pneumoniae
subsp. pneumoniae ST258-K28BO]
gi|414706351|emb|CCN28055.1| putative shikimate 5-dehydrogenase [Klebsiella pneumoniae subsp.
pneumoniae Ecl8]
gi|426305696|gb|EKV67813.1| shikimate 5-dehydrogenase [Klebsiella pneumoniae VA360]
gi|426308001|gb|EKV70072.1| shikimate 5-dehydrogenase [Klebsiella pneumoniae JHCK1]
gi|427538900|emb|CCM94964.1| Shikimate/quinate 5-dehydrogenase I beta [Klebsiella pneumoniae
subsp. pneumoniae ST512-K30BO]
gi|448876277|gb|EMB11271.1| shikimate 5-dehydrogenase [Klebsiella pneumoniae hvKP1]
Length = 287
Score = 129 bits (324), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 93/303 (30%), Positives = 149/303 (49%), Gaps = 36/303 (11%)
Query: 231 EHINPDTKIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLV--DDVKEFFRTYSGTD 288
E I T++ GL++ P+ HS P +HN AF H + +Y+ V ++K+ + +
Sbjct: 3 ERITGHTELIGLIATPIRHSMSPTMHNEAFAHLGLDYVYLAFEVGNQELKDVVQGFRAMK 62
Query: 289 FAGFSVGIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDA 348
GF+V +P+K D++ P A+ +GAVNT++ DG L G+ TD + A+ +A
Sbjct: 63 LRGFNVSMPNKTEICQYLDKLSPAAQLVGAVNTVVND--DGVLTGHITDGTGYMRALSEA 120
Query: 349 LRERQGINGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGARVI-IFNRNYERAKALA 407
GI+ I GK ++GAGGA AL A G + I IFNR R K A
Sbjct: 121 -----GID--------IIGKKMTVLGAGGAATALCVQAALDGVKAISIFNR---RDKFFA 164
Query: 408 DAVSGEA---------LHFEYLHEFFP-----EKGMILANASAIGMEPNSDQSPVPKEA- 452
+A A +H L + + +IL NA+ +GM+P Q +P ++
Sbjct: 165 NAEETVAKIRHNTDCEIHLFDLDDHDKLRAEIDSSVILTNATGVGMKPFEGQMLLPDDSF 224
Query: 453 LKAYELVFDAVYTPRNTRLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRK 512
L+ +V D VY PR T LL A + G ++G+ M + Q F ++TG P D+++
Sbjct: 225 LRPDLIVSDVVYNPRKTHLLEVAEKKGCRTLNGLGMMLWQGARAFEIWTGKQMPVDYIKS 284
Query: 513 LVL 515
++
Sbjct: 285 ILF 287
>gi|387929812|ref|ZP_10132489.1| shikimate 5-dehydrogenase [Bacillus methanolicus PB1]
gi|387586630|gb|EIJ78954.1| shikimate 5-dehydrogenase [Bacillus methanolicus PB1]
Length = 277
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 83/292 (28%), Positives = 146/292 (50%), Gaps = 31/292 (10%)
Query: 238 KIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLVD--DVKEFFRTYSGTDFAGFSVG 295
K++G++ +P+ HS P++HN F+ + Y P V D++ + + +GF+V
Sbjct: 3 KLYGVIGDPISHSMSPVMHNDLFKVYGIDAHYHPFHVKRGDLEAAVQGLKAINCSGFNVT 62
Query: 296 IPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALRERQGI 355
+PHK + D++ PLA++IGAVNT++ + G+L+G+NTD R +
Sbjct: 63 VPHKTEIMNFLDDIDPLAEAIGAVNTVVNK--GGRLIGFNTDG-------------RGFL 107
Query: 356 NGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGARVIIF-NRNYERAKALADAVSGEA 414
G+ + + + +++GAGGA +A+ + G + I F NR E+A L EA
Sbjct: 108 EGLKRNFAVLDSTRVLIIGAGGAAKAIYYTMAHAGVKHIDFCNRTAEKAAQLI-----EA 162
Query: 415 LHFEYLHEFFPEKGM--------ILANASAIGMEPNSDQSPVPKEALKAYELVFDAVYTP 466
F +P + ++ +++GM PN + SP+ E L V D +Y P
Sbjct: 163 CPFSVQSNIYPREKAENRLSNYNLIIQTTSVGMSPNINASPLSLENLGIGAFVSDIIYNP 222
Query: 467 RNTRLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRKLVLEQF 518
T +LR+A GA +G++MF+ Q F +TG + M+++VL+
Sbjct: 223 LETVILRDAKRRGAGTQNGLDMFVFQGAFAFEKWTGIFPDIERMKQIVLKHL 274
>gi|448334888|ref|ZP_21524043.1| shikimate 5-dehydrogenase [Natrinema pellirubrum DSM 15624]
gi|445618352|gb|ELY71927.1| shikimate 5-dehydrogenase [Natrinema pellirubrum DSM 15624]
Length = 267
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 108/279 (38%), Positives = 140/279 (50%), Gaps = 23/279 (8%)
Query: 238 KIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPML--VDDVKEFFRTYSGTDFAGFSVG 295
++GL+ NPVGHS P +H A+ YV DD+ AG +V
Sbjct: 2 DVYGLLGNPVGHSLSPPMHEAAYDELGLEARYVTFEPDQDDLAAAIEGADALGIAGLNVT 61
Query: 296 IPHKEPAVACCDEVHP--LAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALRERQ 353
IP K+ A+ V P LA IGAVNTI G GYNTD A+ A+ D
Sbjct: 62 IPFKQEALEI---VAPEDLATRIGAVNTIDFSG-SGPPTGYNTDAVGALRALRD------ 111
Query: 354 GINGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGARVIIFNRNYERAKALADAVSGE 413
H + V+VGAGGAGRA+AFG GA V I NR +A+ LA+AV
Sbjct: 112 -------HDVDLEDARAVVVGAGGAGRAVAFGLADAGATVAIANRTEPKARQLAEAVPRA 164
Query: 414 ALHFEYLHEFFPEKGMILANASAIGMEPNSDQSPVPKEALKAYELVFDAVYTPRNTRLLR 473
+ H E + +L NA+++GME D +PVP +AL V DAVY P TRLLR
Sbjct: 165 SGHGLAALERLLAEADVLVNATSVGME--EDSTPVPADALHGDLAVLDAVYQPLETRLLR 222
Query: 474 EAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRK 512
+AAE GAT V G M + Q + F ++TG AP + M +
Sbjct: 223 DAAEAGATTVDGAWMLLYQGVEAFEIWTGRDAPVEAMNE 261
>gi|257884631|ref|ZP_05664284.1| quinate/shikimate 5-dehydrogenase [Enterococcus faecium 1,231,501]
gi|257820469|gb|EEV47617.1| quinate/shikimate 5-dehydrogenase [Enterococcus faecium 1,231,501]
Length = 284
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 96/299 (32%), Positives = 149/299 (49%), Gaps = 36/299 (12%)
Query: 233 INPDTKIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYV-----PMLVDDVKEFFRTYSGT 287
I+ TK+ GL ++P HS P++HN AF + +Y+ PM + E RT+
Sbjct: 2 ISGQTKLAGLFADPASHSLSPLMHNTAFEANNIDAVYLAFKVNPMNLKQAVESIRTF--- 58
Query: 288 DFAGFSVGIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIED 347
D G ++ +P+K + DEV A+ IGAVNTI+ G+L+GYNTD + ++++
Sbjct: 59 DMLGVNLSMPNKTAVIPYLDEVSQEAQLIGAVNTIVHEK--GRLIGYNTDGAGFMQSVQE 116
Query: 348 ALRERQGINGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGAR-VIIFNRN---YERA 403
A GI+ I K L+GAGGA +A+ A GA ++++ RN + +
Sbjct: 117 A-----GIS--------IKKKKMTLLGAGGAAKAVTVQAALDGAEEIVVYKRNNQTFAQV 163
Query: 404 KALADAVSG------EALHFEYLHEFFPE--KGMILANASAIGMEPNSDQSPVPKEALKA 455
K + +S + F H+ + + +L NA+ IGM +QSP+ ++
Sbjct: 164 KETFEQLSYRTSCKIKVRDFADTHQLRKDLKESCLLVNATDIGMGKKINQSPLLDISMMH 223
Query: 456 YEL-VFDAVYTPRNTRLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRKL 513
L VFD +Y PR T LL+EA +VGA +G+ M I Q F L T P + KL
Sbjct: 224 ENLAVFDLIYAPRETCLLKEAKKVGAKGYNGLGMLIYQGAIAFELCTKEKMPIHVIEKL 282
>gi|308174355|ref|YP_003921060.1| shikimate 5-dehydrogenase [Bacillus amyloliquefaciens DSM 7]
gi|307607219|emb|CBI43590.1| shikimate 5-dehydrogenase [Bacillus amyloliquefaciens DSM 7]
Length = 280
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 87/284 (30%), Positives = 138/284 (48%), Gaps = 22/284 (7%)
Query: 238 KIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLVD--DVKEFFRTYSGTDFAGFSVG 295
+++G++ NP+GHS P +HN A + NG Y V+ +K+ G +V
Sbjct: 3 QLYGVIGNPIGHSMSPDIHNAALQDKNINGQYFAFQVEPRHLKDAVNGIKALGICGVNVT 62
Query: 296 IPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALRERQGI 355
+PHK + DE+H AK +GAVNT+ R +L+GYNTD + ++ L +
Sbjct: 63 VPHKVAIMEHLDEIHESAKVLGAVNTVKRE--GDRLIGYNTDGDGFYKSLVKVLDK---- 116
Query: 356 NGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGARVI-IFNRNYERAKALADAV---- 410
PI+ +++GAGGA RA+ R + + NR E+A++L A
Sbjct: 117 --------PISELSILMIGAGGAARAIFTTIVRREPKQFDVCNRTPEKAESLIAAAPSFQ 168
Query: 411 SGEALHFEYLHEFFPEKGMILANASAIGMEPNSDQSPVPKEALKAYELVFDAVYTPRNTR 470
AL + + +I+ + +++GM P +D P+ E K +V D VY P T
Sbjct: 169 QKRALTLKEAENQLEQYDVII-HTTSVGMYPKTDAVPLSLERAKTGAIVCDIVYNPIQTA 227
Query: 471 LLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRKLV 514
L+EA + G T + GV MF+ QA F+L+T MR +V
Sbjct: 228 FLKEAEKRGLTTLDGVGMFVEQAALSFKLWTEQEPDSSLMRAIV 271
>gi|406664822|ref|ZP_11072597.1| Shikimate dehydrogenase [Bacillus isronensis B3W22]
gi|405387670|gb|EKB47094.1| Shikimate dehydrogenase [Bacillus isronensis B3W22]
Length = 299
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 92/304 (30%), Positives = 150/304 (49%), Gaps = 34/304 (11%)
Query: 231 EHINPDTKIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLV--DDVKEFFRTYSGTD 288
+ I+ TK+ GL++ P+GHS P +HN + N Y+ V ++++E + +
Sbjct: 7 KKIDGKTKLVGLLATPIGHSLSPRMHNLGYSLKGLNYAYLAFEVGNEELEETVKGFKAAG 66
Query: 289 FAGFSVGIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDA 348
AGF+V +P+K + DE+ AK A NT++ R DGKL+GYNTD I +
Sbjct: 67 VAGFNVSMPNKMKVLDYLDELDDSAKYSRASNTVVNR--DGKLIGYNTDGLGYIRNL--- 121
Query: 349 LRERQGINGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGARVI-IFNRN---YERAK 404
H + G+ LVG+GGA +A G R I IF RN + +A+
Sbjct: 122 ----------IEHGVELKGQKVTLVGSGGAATPIAIQFAQSGIREISIFARNDQFFGQAE 171
Query: 405 ALADAVSGEALHFEYLHEFFP-----------EKGMILANASAIGMEPNSDQSPVPK--E 451
+ ++ E F FP + ILAN +++GM+P S V + +
Sbjct: 172 ENVNYINNEMKEFGVKANIFPLEDKESFRREVAESAILANGTSLGMKPLDHLSIVDETLD 231
Query: 452 ALKAYELVFDAVYTPRNTRLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMR 511
L+ +V D VY P+ ++LL +A E G TV++G+ M + Q F+LFTG P + ++
Sbjct: 232 VLRKDLVVTDVVYNPQKSKLLTQAEEAGCTVINGLGMMLWQGALGFKLFTGEDMPIEEIK 291
Query: 512 KLVL 515
+++
Sbjct: 292 EIMF 295
>gi|366166816|ref|ZP_09466571.1| shikimate dehydrogenase [Acetivibrio cellulolyticus CD2]
Length = 294
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 85/278 (30%), Positives = 143/278 (51%), Gaps = 27/278 (9%)
Query: 237 TKIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLVD--DVKEFFRTYSGTDFAGFSV 294
T++ GL+ NPV HS P LHN + +YVP+ VD +++ + DF GF+V
Sbjct: 11 TRLLGLIGNPVEHSVSPQLHNSLSLLLGLDLLYVPLKVDKENLEVVVKALKAVDFVGFNV 70
Query: 295 GIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALRERQG 354
IP+K + D+ A +G+VNT+ + I+G+L GYNTD E + A ++A
Sbjct: 71 TIPYKRDIMKFIDDNTKEAILMGSVNTV--KKIEGRLYGYNTDGEGFLRAFKEA------ 122
Query: 355 INGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGA-RVIIFNRNYERAKALADAVSGE 413
+ GK V++GAGGA R +A GA ++ I NR +++ LA+ V+
Sbjct: 123 ------AGTGFKGKKVVMIGAGGAARPIAVKIAMDGAEKISIVNRTTQKSVELAEVVNEN 176
Query: 414 ALHFEYLHEF--------FPEKGMILANASAIGMEPNSDQSPVPK-EALKAYELVFDAVY 464
++ F F E +I+ N +++GM P+ D+SP+ + ++ ++V+D VY
Sbjct: 177 VAEIVQVYNFEDKTLKMAFEESDIII-NTTSVGMSPDIDKSPIENIDYFRSGQIVYDIVY 235
Query: 465 TPRNTRLLREAAEVGATVVSGVEMFIRQALGQFRLFTG 502
P T+ L +A G + G+ M Q + + ++TG
Sbjct: 236 NPSKTKFLADAESRGCKAIGGLGMLFYQGINSYEIWTG 273
>gi|154686826|ref|YP_001421987.1| shikimate 5-dehydrogenase [Bacillus amyloliquefaciens FZB42]
gi|154352677|gb|ABS74756.1| AroD [Bacillus amyloliquefaciens FZB42]
Length = 280
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 87/285 (30%), Positives = 139/285 (48%), Gaps = 22/285 (7%)
Query: 238 KIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLVD--DVKEFFRTYSGTDFAGFSVG 295
+++G++ NP+GHS P +HN A + NG Y V+ +K+ G +V
Sbjct: 3 QLYGVIGNPIGHSMSPDIHNAALQDKNINGQYFAFQVEPHHLKDAVNGIKALGICGVNVT 62
Query: 296 IPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALRERQGI 355
+PHK + DE+H AK +GAVNT+ R +L+GYNTD + ++ L +
Sbjct: 63 VPHKVAIMEHLDEIHESAKVLGAVNTVKRE--GDRLIGYNTDGDGFYKSLVKVLDK---- 116
Query: 356 NGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGARVI-IFNRNYERAKALADAV---- 410
PI+ +++GAGGA RA+ R + + NR E+A++L A
Sbjct: 117 --------PISELSILMIGAGGAARAIFTTIVRREPKQFDVCNRTPEKAESLIAAAPSFQ 168
Query: 411 SGEALHFEYLHEFFPEKGMILANASAIGMEPNSDQSPVPKEALKAYELVFDAVYTPRNTR 470
AL + + +I+ + +++GM P +D P+ E K +V D VY P T
Sbjct: 169 QKRALTLKEAENQLEQYDVII-HTTSVGMYPKTDAVPLSLERAKTGAIVCDIVYNPIQTA 227
Query: 471 LLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRKLVL 515
L+EA + G T + GV MF+ QA F+L+T MR +V+
Sbjct: 228 FLKEAEKRGLTTLDGVGMFVEQAALSFKLWTEQEPDSGLMRAIVV 272
>gi|310640411|ref|YP_003945169.1| shikimate 5-dehydrogenase [Paenibacillus polymyxa SC2]
gi|386039559|ref|YP_005958513.1| shikimate 5-dehydrogenase [Paenibacillus polymyxa M1]
gi|309245361|gb|ADO54928.1| Shikimate 5-dehydrogenase [Paenibacillus polymyxa SC2]
gi|343095597|emb|CCC83806.1| shikimate 5-dehydrogenase [Paenibacillus polymyxa M1]
Length = 296
Score = 129 bits (323), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 89/299 (29%), Positives = 146/299 (48%), Gaps = 33/299 (11%)
Query: 232 HINPDTKIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLV--DDVKEFFRTYSGTDF 289
I+ T++ GL++ P+GHS P +HN AF N Y+ V + ++E R +
Sbjct: 6 RIDGRTQLIGLLATPIGHSLSPAMHNLAFEKLGLNNAYMAFEVGNEQLEEVVRGMRALNI 65
Query: 290 AGFSVGIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDAL 349
G++V +P+K + DE+ AK GAVNT++ DGKL GY+TD + +++
Sbjct: 66 RGYNVSMPNKTAILQYLDELDDSAKFTGAVNTVVN--TDGKLKGYSTDGSGYVRNLQE-- 121
Query: 350 RERQGINGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRG-ARVIIFNRN---YERAKA 405
H + GK LVG+GGA +A A G A + IF RN + RA+
Sbjct: 122 -----------HGIDLKGKKMTLVGSGGAATPIAIEAARAGLAEISIFARNDQFFARAEE 170
Query: 406 LADAVSGEALHFEYLHEFFP----EK-------GMILANASAIGMEPNSDQSPVPK-EAL 453
++ E H + + EK I AN + +GM+P +S + L
Sbjct: 171 NVRIINEEMKHAQVKANIYALEDQEKLREEILTSHIFANGTGVGMKPLEGKSVIEDVSML 230
Query: 454 KAYELVFDAVYTPRNTRLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRK 512
++ +V D VY+P ++L+ +A VGAT ++G+ M + Q F L+TG P ++++
Sbjct: 231 RSDLIVTDVVYSPAKSKLMEQAESVGATAINGLGMMLWQGALAFELWTGQEMPVAYIKE 289
>gi|419761794|ref|ZP_14288045.1| shikimate dehydrogenase [Klebsiella pneumoniae subsp. pneumoniae
DSM 30104]
gi|397745335|gb|EJK92542.1| shikimate dehydrogenase [Klebsiella pneumoniae subsp. pneumoniae
DSM 30104]
Length = 287
Score = 129 bits (323), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 92/303 (30%), Positives = 148/303 (48%), Gaps = 36/303 (11%)
Query: 231 EHINPDTKIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLV--DDVKEFFRTYSGTD 288
E I T++ GL++ P+ HS P +HN AF H + +Y+ V ++K+ + +
Sbjct: 3 ERITGHTELIGLIATPIRHSMSPTMHNEAFAHLGLDYVYLAFEVGNQELKDVVQGFRAMK 62
Query: 289 FAGFSVGIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDA 348
GF+V +P+K D++ P A+ +GAVNT++ DG L G+ TD + A+ +A
Sbjct: 63 LRGFNVSMPNKTEICQYLDKLSPAAQLVGAVNTVVND--DGVLTGHITDGTGYMRALSEA 120
Query: 349 LRERQGINGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGARVI-IFNRNYERAKALA 407
GI+ I GK ++GAGGA AL A G + I IFNR R K A
Sbjct: 121 -----GID--------IIGKKMTVLGAGGAATALCVQAALDGVKAISIFNR---RDKFFA 164
Query: 408 DAVSGEA---------LHFEYLHEFFP-----EKGMILANASAIGMEPNSDQSPVPKEAL 453
+A A +H L + + +IL NA+ +GM+P Q +P ++
Sbjct: 165 NAEETVAKIRHNTDCEIHLFDLDDHDKLRAEIDSSVILTNATGVGMKPFEGQMLLPDDSF 224
Query: 454 KAYELVF-DAVYTPRNTRLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRK 512
+L+ D VY PR T LL A + G ++G+ M + Q F ++TG P D+++
Sbjct: 225 LLPDLIVSDVVYNPRKTHLLEVAEKKGCRTLNGLGMMLWQGARAFEIWTGKQMPVDYIKS 284
Query: 513 LVL 515
++
Sbjct: 285 ILF 287
>gi|448397353|ref|ZP_21569474.1| shikimate 5-dehydrogenase [Haloterrigena limicola JCM 13563]
gi|445672990|gb|ELZ25558.1| shikimate 5-dehydrogenase [Haloterrigena limicola JCM 13563]
Length = 267
Score = 129 bits (323), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 106/277 (38%), Positives = 138/277 (49%), Gaps = 19/277 (6%)
Query: 238 KIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLVD--DVKEFFRTYSGTDFAGFSVG 295
++GL+ NPVGHS P +H A+ YV D D+++ AG +V
Sbjct: 2 DVYGLLGNPVGHSLSPPMHEAAYDELGLEARYVTFEPDEDDIEDAIAGADALGIAGLNVT 61
Query: 296 IPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALRERQGI 355
IP K+ A+ LA IGAVNTI G GYNTD A+ A+ D
Sbjct: 62 IPFKQDALEIV-APEDLAARIGAVNTIDFSG-SGPPTGYNTDAVGALRALRD-------- 111
Query: 356 NGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGARVIIFNRNYERAKALADAVSGEAL 415
H I V+VGAGGAGRA+AFG GA V I NR +A ALA+ V
Sbjct: 112 -----HDVTIQDARAVVVGAGGAGRAVAFGLADAGATVAIANRTESKAHALAEEVPRATG 166
Query: 416 HFEYLHEFFPEKGMILANASAIGMEPNSDQSPVPKEALKAYELVFDAVYTPRNTRLLREA 475
H + ++ NA+++GME SD +PVP +AL V DAVY+P TRLLR+A
Sbjct: 167 HGLGDLKRLVTNADVVVNATSVGME--SDATPVPADALHEDLAVLDAVYSPLETRLLRDA 224
Query: 476 AEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRK 512
A+ GAT V G M + Q + F ++TG AP D M
Sbjct: 225 ADAGATTVDGAWMLLYQGVEAFEIWTGRDAPVDAMNN 261
>gi|257869370|ref|ZP_05649023.1| shikimate 5-dehydrogenase [Enterococcus gallinarum EG2]
gi|257803534|gb|EEV32356.1| shikimate 5-dehydrogenase [Enterococcus gallinarum EG2]
Length = 289
Score = 129 bits (323), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 90/298 (30%), Positives = 140/298 (46%), Gaps = 32/298 (10%)
Query: 233 INPDTKIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLVD--DVKEFFRTYSGTDFA 290
I T++ L + P HS P +HN +F + + +Y+ VD + ++ D
Sbjct: 5 ITGHTRLATLFAKPAKHSISPAMHNLSFEDQKVDAVYLAFDVDPESLAASIQSIRQLDLL 64
Query: 291 GFSVGIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALR 350
G ++ +PHK AV DE+ P A+ IGA+NTI+ G L+G+NTD + A+ D
Sbjct: 65 GVNLSMPHKMAAVPLVDELSPAAELIGAINTIVNHK--GHLIGHNTDGIGFMRALGDI-- 120
Query: 351 ERQGINGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGARVI-IFNRNYE-------R 402
I G ++GAGGA A+ A G I +FNRN E +
Sbjct: 121 -----------EVSIIGGTMTVIGAGGAATAIISQAALDGVETIHVFNRNDEFYPVIESK 169
Query: 403 AKALADAVS-----GEALHFEYLHEFFPEKGMILANASAIGMEPNSDQSPVPKEALKAYE 457
+ +A A + G+ + L E +L NA+ +GM+P D SP+ +
Sbjct: 170 LQQIAAATTCNITLGDLDDQQALGLAIKES-QLLVNATGVGMKPQEDASPLKDRGMLRES 228
Query: 458 L-VFDAVYTPRNTRLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRKLV 514
L V+D +Y PR TRLLR+A GA +G+ M + Q F L+T P + ++ L+
Sbjct: 229 LAVYDVIYNPRETRLLRDAKAAGAKTANGLSMLLYQGAAAFELWTDKKMPIEKVKTLI 286
>gi|237756605|ref|ZP_04585122.1| shikimate 5-dehydrogenase [Sulfurihydrogenibium yellowstonense
SS-5]
gi|237691236|gb|EEP60327.1| shikimate 5-dehydrogenase [Sulfurihydrogenibium yellowstonense
SS-5]
Length = 279
Score = 129 bits (323), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 85/291 (29%), Positives = 145/291 (49%), Gaps = 31/291 (10%)
Query: 236 DTKIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLV--DDVKEFFRTYSGTDFAGFS 293
+T ++GL PV HSK P F+H N +YVP V +D+++ + D G +
Sbjct: 6 NTLVYGLFGYPVKHSKSPTFQTAVFQHLGINAVYVPFQVKPEDIEKAVESLRVLDIKGVN 65
Query: 294 VGIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALRERQ 353
V IPHKE + +E+ K I AVNTI + IDG L+GYNTD I +++ + +
Sbjct: 66 VTIPHKENVIPYLNEISEEVKVIKAVNTI--KNIDGYLIGYNTDWYGFIEGLKEIMPD-- 121
Query: 354 GINGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRG-ARVIIFNRNYERAKALADAVSG 412
IAGK +++GAGG+ RA+ +G ++G ++ + NR +RA+ L + S
Sbjct: 122 -----------IAGKRVLVIGAGGSSRAIIYGLLNQGVGKIYLANRTIKRAENLIEDFSN 170
Query: 413 ---------EALHFEYLHEFFPEKGMILANASAIGMEPNSDQSPVPKEALKAYELVFDAV 463
+ + + ++ E +I+ N +++G+ + D + + V D +
Sbjct: 171 FYRIVKMIIKPISLDEINRILNEVELIV-NTTSVGLNED-DPEIFDYNLINSSHTVVDII 228
Query: 464 YTPRNTRLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRKLV 514
Y T+LL++A E A +G M I Q F ++TG AP + M++ +
Sbjct: 229 Y--EETKLLQKAKEKNANYQNGYPMLIYQGAKSFEIWTGKPAPIEVMKRAI 277
>gi|409385048|ref|ZP_11237769.1| Shikimate/quinate 5-dehydrogenase I beta [Lactococcus raffinolactis
4877]
gi|399207426|emb|CCK18684.1| Shikimate/quinate 5-dehydrogenase I beta [Lactococcus raffinolactis
4877]
Length = 272
Score = 129 bits (323), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 92/288 (31%), Positives = 143/288 (49%), Gaps = 24/288 (8%)
Query: 233 INPDTKIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLVD--DVKEFFRTYSGTDFA 290
IN TK+ +V+NP+ HS P +HN AF H NG+Y+ D+ + D
Sbjct: 3 INGYTKLAAVVANPIKHSLSPFIHNLAFDHVGENGVYLAFETPEADLGSVIESIKTLDMY 62
Query: 291 GFSVGIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALR 350
G ++ +P+KE AV DE+ +AK GA+NTI+ R DGKL G +TD +++
Sbjct: 63 GVNLSMPYKEAAVPYMDELSEVAKLTGAINTIVNR--DGKLFGTSTDGAGFFKSLKHF-- 118
Query: 351 ERQGINGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGAR-VIIFNRNYERAKALADA 409
+ G ++GAGGA R++ A +GAR + ++NR Y+ L
Sbjct: 119 -------------KVKGSTITVIGAGGAARSIIAEAAVQGARQITVYNRTYK--PELFTN 163
Query: 410 VSGEALHFEYLHEFFPEKGMILANASAIGMEPNSDQSPVPKEALKAYELVFDAVYTPRNT 469
G + F+ L + G +L N +++GM+ S P+ + K LV D +Y P T
Sbjct: 164 YPGNIV-FKPLSDLTELTGDLLVNTTSLGMDGVSLPIPMALQLPKDM-LVADVIYQPIET 221
Query: 470 RLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRKLVLEQ 517
LL A G + V+G+ M + QA F+L+TG P D + K + E+
Sbjct: 222 PLLTYAKSQGNSTVNGLGMLLYQAAESFKLWTGHEMPTDIILKKLEEK 269
>gi|424935106|ref|ZP_18353478.1| Shikimate dehydrogenase 2 [Klebsiella pneumoniae subsp. pneumoniae
KpQ3]
gi|407809293|gb|EKF80544.1| Shikimate dehydrogenase 2 [Klebsiella pneumoniae subsp. pneumoniae
KpQ3]
Length = 292
Score = 129 bits (323), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 93/303 (30%), Positives = 149/303 (49%), Gaps = 36/303 (11%)
Query: 231 EHINPDTKIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLV--DDVKEFFRTYSGTD 288
E I T++ GL++ P+ HS P +HN AF H + +Y+ V ++K+ + +
Sbjct: 8 ERITGHTELIGLIATPIRHSMSPTMHNEAFAHLGLDYVYLAFEVGNQELKDVVQGFRAMK 67
Query: 289 FAGFSVGIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDA 348
GF+V +P+K D++ P A+ +GAVNT++ DG L G+ TD + A+ +A
Sbjct: 68 LRGFNVSMPNKTEICQYLDKLSPAAQLVGAVNTVVND--DGVLTGHITDGTGYMRALSEA 125
Query: 349 LRERQGINGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGARVI-IFNRNYERAKALA 407
GI+ I GK ++GAGGA AL A G + I IFNR R K A
Sbjct: 126 -----GID--------IIGKKMTVLGAGGAATALCVQAALDGVKAISIFNR---RDKFFA 169
Query: 408 DAVSGEA---------LHFEYLHEFFP-----EKGMILANASAIGMEPNSDQSPVPKEA- 452
+A A +H L + + +IL NA+ +GM+P Q +P ++
Sbjct: 170 NAEETVAKIRHNTDCEIHLFDLDDHDKLRAEIDSSVILTNATGVGMKPFEGQMLLPDDSF 229
Query: 453 LKAYELVFDAVYTPRNTRLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRK 512
L+ +V D VY PR T LL A + G ++G+ M + Q F ++TG P D+++
Sbjct: 230 LRPDLIVSDVVYNPRKTHLLEVAEKKGCRTLNGLGMMLWQGARAFEIWTGKQMPVDYIKS 289
Query: 513 LVL 515
++
Sbjct: 290 ILF 292
>gi|421452028|ref|ZP_15901389.1| Shikimate 5-dehydrogenase [Streptococcus salivarius K12]
gi|400182459|gb|EJO16721.1| Shikimate 5-dehydrogenase [Streptococcus salivarius K12]
Length = 285
Score = 129 bits (323), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 92/290 (31%), Positives = 149/290 (51%), Gaps = 31/290 (10%)
Query: 232 HINPDTKIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLV--DDVKEFFRTYSGTDF 289
I+ T++ +V+NP+ HS P +HN AF T+ NG+YV + D+ E +
Sbjct: 2 QIDGHTRLAAVVANPIKHSISPFIHNSAFEKTQVNGVYVAWEIPESDLAETVENIRRYNM 61
Query: 290 AGFSVGIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDAL 349
G ++ +P+KE + DE+ P + IGAVNT++ R DG L+G+NTD ++++D
Sbjct: 62 FGINLSMPYKEAVIPFLDEISPAVQLIGAVNTVVNR--DGHLIGHNTDGFGFFASLKD-- 117
Query: 350 RERQGINGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGAR---VIIFNRNYERAKAL 406
SP + +L GAGGA +A+ A GA+ V + +++ ++AK
Sbjct: 118 ------------FSPRDAHLMIL-GAGGAAKAIVTQAVLDGAKKVSVYVRHQSLDKAKES 164
Query: 407 ADAVSGEA---LHFEYLH--EFFPE---KGMILANASAIGMEPNSDQSPVPKEALKAYEL 458
++ +A L F L+ E+F E + +L NA+++GM+ S P + K L
Sbjct: 165 FKSLLEQATCHLEFHALNDLEYFQEELGQADLLVNATSVGMDGESLPIPTDTKFPKGL-L 223
Query: 459 VFDAVYTPRNTRLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPED 508
V D +Y P T L A + G V+G+ M + QA G F+L+TG P D
Sbjct: 224 VADIIYQPFETPFLALARKQGIEAVNGLGMLLHQAAGAFKLWTGKDMPTD 273
>gi|375309511|ref|ZP_09774792.1| shikimate 5-dehydrogenase [Paenibacillus sp. Aloe-11]
gi|375078820|gb|EHS57047.1| shikimate 5-dehydrogenase [Paenibacillus sp. Aloe-11]
Length = 290
Score = 129 bits (323), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 93/297 (31%), Positives = 139/297 (46%), Gaps = 40/297 (13%)
Query: 239 IFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLV--DDVKEFFRTYSGTDFAGFSVGI 296
+ G++ +P+ HSK P++H A + G +VP+ V D +++ + F G +V I
Sbjct: 16 LLGVLGDPIKHSKSPLMHKIALQAAGIEGDFVPLHVKPDQLEDAMKGIRALHFRGVNVTI 75
Query: 297 PHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALRERQGIN 356
PHK + DE+ A+ IGAVNTI+ +G+L GYNTD + + L+E +
Sbjct: 76 PHKVEVMKYLDEIDEGARLIGAVNTIVND--NGRLKGYNTDGIGYVRS----LKEETSVE 129
Query: 357 GVASHTSPIAGKIFVLVGAGGAGRALAFGA-KSRGARVIIFNRNYERAKALADAVSGEAL 415
+ G ++GAGGA R + + R V+I NR E+A+ LA
Sbjct: 130 --------LKGAKIAVLGAGGAARGVIHALLEERPESVMILNRTREKAEQLAK------- 174
Query: 416 HFEYLHEFFPEKGM-------------ILANASAIGMEPNSDQSPVPKEALKAYELVFDA 462
E+ E P G +L N +++GM P SD+ P+ + +V D
Sbjct: 175 --EWTTEAIPVTGYANDEAKNVLATVDVLINTTSVGMSPLSDELPLETSLIPKGIIVSDL 232
Query: 463 VYTPRNTRLLREAAEV-GATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRKLVLEQF 518
+Y P TRLLRE+ E G V G+ MF+ Q F FTG D MR VL
Sbjct: 233 IYNPLETRLLRESREQRGCIVHGGLGMFVYQGAVAFEYFTGIAPAVDQMRAAVLRSL 289
>gi|452856329|ref|YP_007498012.1| shikimate 5-dehydrogenase [Bacillus amyloliquefaciens subsp.
plantarum UCMB5036]
gi|452080589|emb|CCP22352.1| shikimate 5-dehydrogenase [Bacillus amyloliquefaciens subsp.
plantarum UCMB5036]
Length = 280
Score = 129 bits (323), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 87/284 (30%), Positives = 138/284 (48%), Gaps = 22/284 (7%)
Query: 238 KIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLVD--DVKEFFRTYSGTDFAGFSVG 295
+++G++ NP+GHS P +HN A + NG Y V+ +K+ G +V
Sbjct: 3 QLYGVIGNPIGHSMSPDIHNAALQDKNINGQYFAFQVEPRHLKDAVNGIKALGICGVNVT 62
Query: 296 IPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALRERQGI 355
+PHK + DE+H AK +GAVNT+ R +L+GYNTD + ++ L +
Sbjct: 63 VPHKVAIMEHLDEIHESAKVLGAVNTVKRE--GDRLIGYNTDGDGFYKSLVKVLDK---- 116
Query: 356 NGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGARVI-IFNRNYERAKALADAV---- 410
PI+ +++GAGGA RA+ R + + NR E+A++L A
Sbjct: 117 --------PISELSILMIGAGGAARAIFTTIVRREPKQFDVCNRTPEKAESLIAAAPSFQ 168
Query: 411 SGEALHFEYLHEFFPEKGMILANASAIGMEPNSDQSPVPKEALKAYELVFDAVYTPRNTR 470
AL + + +I+ + +++GM P +D P+ E K +V D VY P T
Sbjct: 169 QKRALTLKEAENQLEQYDVII-HTTSVGMYPKTDAVPLSLERAKTGAIVCDIVYNPIQTA 227
Query: 471 LLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRKLV 514
L+EA + G T + GV MF+ QA F+L+T MR +V
Sbjct: 228 FLKEAEKRGLTTLDGVGMFVEQAALSFKLWTEQEPDSGLMRAIV 271
>gi|228478338|ref|ZP_04062946.1| shikimate 5-dehydrogenase [Streptococcus salivarius SK126]
gi|228250017|gb|EEK09287.1| shikimate 5-dehydrogenase [Streptococcus salivarius SK126]
Length = 285
Score = 128 bits (322), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 93/290 (32%), Positives = 149/290 (51%), Gaps = 31/290 (10%)
Query: 232 HINPDTKIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLV--DDVKEFFRTYSGTDF 289
I+ T++ +V+NP+ HS P +HN AF T+ NG+YV + D+ E +
Sbjct: 2 QIDGHTRLAAVVANPIKHSISPFIHNSAFEKTQVNGVYVAWEIPESDLAETVENIRRYNM 61
Query: 290 AGFSVGIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDAL 349
G ++ +P+KE + DE+ P A+ IGAVNT++ R DG L+G+NTD ++++D
Sbjct: 62 FGINLSMPYKEAVIPFLDEISPAAQLIGAVNTVVNR--DGHLIGHNTDGFGFFASLKD-- 117
Query: 350 RERQGINGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGAR---VIIFNRNYERAKAL 406
SP + +L GAGGA +A+ A GA+ V + ++ ++AK
Sbjct: 118 ------------FSPRDAHLMIL-GAGGAAKAIVTQAVLDGAKKVSVYVRPQSLDKAKES 164
Query: 407 ADAVSGEA---LHFEYLH--EFFPE---KGMILANASAIGMEPNSDQSPVPKEALKAYEL 458
++ +A L F L+ E+F E + +L NA+++GM+ S P + K L
Sbjct: 165 FKSLLEQATCHLEFHALNDFEYFQEELGQADLLVNATSVGMDGESLPIPTDTKFPKGL-L 223
Query: 459 VFDAVYTPRNTRLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPED 508
V D +Y P T L A + G V+G+ M + QA G F+L+TG P D
Sbjct: 224 VADIIYQPFETPFLALARKQGIEAVNGLGMLLHQAAGAFKLWTGKDMPTD 273
>gi|425445315|ref|ZP_18825347.1| Shikimate dehydrogenase [Microcystis aeruginosa PCC 9443]
gi|389734714|emb|CCI01664.1| Shikimate dehydrogenase [Microcystis aeruginosa PCC 9443]
Length = 302
Score = 128 bits (322), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 84/306 (27%), Positives = 149/306 (48%), Gaps = 27/306 (8%)
Query: 225 KQVYQLEHINPDTKIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLV--DDVKEFFR 282
K + + IN TK+ G++ +P+GH+ PI+HN A N +Y+P+ + +++
Sbjct: 12 KPTFFMTIINGKTKLLGVIGDPIGHTLSPIMHNAAIDALGLNYVYLPLPIAPENLTTAIA 71
Query: 283 TYSGTDFAGFSVGIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAI 342
S D GFSV IPHK + ++ A+ +GAVNT+ R + G NTD + +
Sbjct: 72 GLSAIDLQGFSVTIPHKLAIIPLLSQITEKARLVGAVNTVWRTETGWQ--GTNTDVDGFL 129
Query: 343 SAIEDALRERQGINGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRG-ARVIIFNRNYE 401
+ ++ ++ +N V ++G GGA RA+ G ++ + RN +
Sbjct: 130 APLKSLDKDWSRVNPV-------------ILGNGGAARAVVVACAQLGCGKIHLVGRNQK 176
Query: 402 RAKALADAVSGEALH-FEYLHEFFPEKGMI-----LANASAIGMEPNSDQSPVPKEALKA 455
+ ++ + +L+ +H + +G++ L N++ IGM P +QSPV E L
Sbjct: 177 KLDPFKESWANTSLYDLLEVHSWDELEGLLSTTELLINSTPIGMSPQGEQSPVELELLDI 236
Query: 456 YE---LVFDAVYTPRNTRLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRK 512
+ +D +Y PR T+ LR A G ++ G+EM + Q ++ G P MR+
Sbjct: 237 LPPSAIAYDLIYNPRPTKFLRLARTRGIRIIDGLEMLVNQGAIALEIWLGQPVPVSVMRE 296
Query: 513 LVLEQF 518
+L+QF
Sbjct: 297 ALLKQF 302
>gi|375363099|ref|YP_005131138.1| shikimate 5-dehydrogenase [Bacillus amyloliquefaciens subsp.
plantarum CAU B946]
gi|384266178|ref|YP_005421885.1| shikimate 5-dehydrogenase [Bacillus amyloliquefaciens subsp.
plantarum YAU B9601-Y2]
gi|385265565|ref|ZP_10043652.1| shikimate 5-dehydrogenase [Bacillus sp. 5B6]
gi|387899199|ref|YP_006329495.1| shikimate 5-dehydrogenase [Bacillus amyloliquefaciens Y2]
gi|421730915|ref|ZP_16170041.1| shikimate 5-dehydrogenase [Bacillus amyloliquefaciens subsp.
plantarum M27]
gi|451346228|ref|YP_007444859.1| shikimate 5-dehydrogenase [Bacillus amyloliquefaciens IT-45]
gi|371569093|emb|CCF05943.1| Shikimate 5-dehydrogenase [Bacillus amyloliquefaciens subsp.
plantarum CAU B946]
gi|380499531|emb|CCG50569.1| Shikimate 5-dehydrogenase [Bacillus amyloliquefaciens subsp.
plantarum YAU B9601-Y2]
gi|385150061|gb|EIF13998.1| shikimate 5-dehydrogenase [Bacillus sp. 5B6]
gi|387173309|gb|AFJ62770.1| shikimate 5-dehydrogenase [Bacillus amyloliquefaciens Y2]
gi|407075069|gb|EKE48056.1| shikimate 5-dehydrogenase [Bacillus amyloliquefaciens subsp.
plantarum M27]
gi|449849986|gb|AGF26978.1| shikimate 5-dehydrogenase [Bacillus amyloliquefaciens IT-45]
Length = 280
Score = 128 bits (322), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 87/284 (30%), Positives = 138/284 (48%), Gaps = 22/284 (7%)
Query: 238 KIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLVD--DVKEFFRTYSGTDFAGFSVG 295
+++G++ NP+GHS P +HN A + NG Y V+ +K+ G +V
Sbjct: 3 QLYGVIGNPIGHSMSPDIHNAALQDKNINGQYFAFQVEPHHLKDAVNGIKALGICGVNVT 62
Query: 296 IPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALRERQGI 355
+PHK + DE+H AK +GAVNT+ R +L+GYNTD + ++ L +
Sbjct: 63 VPHKVAIMEHLDEIHESAKVLGAVNTVKRE--GDRLIGYNTDGDGFYKSLVKVLDK---- 116
Query: 356 NGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGARVI-IFNRNYERAKALADAV---- 410
PI+ +++GAGGA RA+ R + + NR E+A++L A
Sbjct: 117 --------PISELSILMIGAGGAARAIFTTIVRREPKQFDVCNRTPEKAESLIAAAPSFQ 168
Query: 411 SGEALHFEYLHEFFPEKGMILANASAIGMEPNSDQSPVPKEALKAYELVFDAVYTPRNTR 470
AL + + +I+ + +++GM P +D P+ E K +V D VY P T
Sbjct: 169 QKRALTLKEAENQLEQYDVII-HTTSVGMYPKTDAVPLSLERAKTGAIVCDIVYNPIQTA 227
Query: 471 LLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRKLV 514
L+EA + G T + GV MF+ QA F+L+T MR +V
Sbjct: 228 FLKEAEKRGLTTLDGVGMFVEQAALSFKLWTEQEPDSGLMRAIV 271
>gi|167747177|ref|ZP_02419304.1| hypothetical protein ANACAC_01891 [Anaerostipes caccae DSM 14662]
gi|317473620|ref|ZP_07932909.1| shikimate 5-dehydrogenase [Anaerostipes sp. 3_2_56FAA]
gi|167654137|gb|EDR98266.1| shikimate dehydrogenase [Anaerostipes caccae DSM 14662]
gi|316898910|gb|EFV20935.1| shikimate 5-dehydrogenase [Anaerostipes sp. 3_2_56FAA]
Length = 289
Score = 128 bits (322), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 97/303 (32%), Positives = 140/303 (46%), Gaps = 35/303 (11%)
Query: 232 HINPDTKIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLV--DDVKEFFRTYSGTDF 289
I T++ GL+ +PVGHS P +HN F+ + Y+ + D VK+ +
Sbjct: 4 RIKGTTRLLGLIGSPVGHSGSPAMHNYGFQALGIDAAYLAFDIKEDQVKDAISAVRTLNM 63
Query: 290 AGFSVGIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDAL 349
G +V +P K A DE+ P A+ IGAVNT++ R DGKL G+ TD E ++ ++D
Sbjct: 64 QGLNVTMPCKTEAAKYMDELSPAARLIGAVNTVVNR--DGKLYGHITDGEGFVANLKD-- 119
Query: 350 RERQGINGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGARVI--------IFNRNYE 401
H I K V+ GAGGA A+ GA + F R E
Sbjct: 120 -----------HGVSIGKKDIVIFGAGGAATAILVQCALDGANSVTVINPRDDFFGRAEE 168
Query: 402 RAKALADA-----VSGEALHFEYLHEFFPEKGMILANASAIGMEPNSDQSPVPKEALKAY 456
K L + ++ L E + K IL N + +GM+P D S + +L
Sbjct: 169 MHKKLREETPDCDITLIDLADEAAVKEAVSKTDILINGTLLGMKPKEDTSVIRDTSLFRK 228
Query: 457 ELVF-DAVYTPRNTRLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRKLVL 515
++V D VY P+ T+LLREA G V G M + Q + F+LFTG +D K V
Sbjct: 229 DMVVADVVYNPKETKLLREAKAAGCRTVQGDGMLLWQGVAAFKLFTG----QDMPVKEVK 284
Query: 516 EQF 518
E+F
Sbjct: 285 EKF 287
>gi|387783729|ref|YP_006069812.1| shikimate dehydrogenase [Streptococcus salivarius JIM8777]
gi|338744611|emb|CCB94977.1| shikimate dehydrogenase [Streptococcus salivarius JIM8777]
Length = 285
Score = 128 bits (322), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 93/291 (31%), Positives = 150/291 (51%), Gaps = 33/291 (11%)
Query: 232 HINPDTKIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLV--DDVKEFFRTYSGTDF 289
I+ T++ +V+NP+ HS P +HN AF T+ NG+YV + D+ E +
Sbjct: 2 QIDGHTRLAAVVANPIKHSISPFIHNSAFEKTQVNGVYVAWEIPESDLAETVENIRRYNM 61
Query: 290 AGFSVGIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDAL 349
G ++ +P+KE + DE+ P A+ IGAVNT++ R DG L+G+NTD ++++D
Sbjct: 62 FGINLSMPYKEAVIPFLDEISPAAQLIGAVNTVVNR--DGHLIGHNTDGFGFFASLKD-- 117
Query: 350 RERQGINGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGAR---VIIFNRNYERAKAL 406
SP + +L GAGGA +A+ A GA+ V + ++ ++AK
Sbjct: 118 ------------FSPRDAHLMIL-GAGGAAKAIVTQAVLDGAKKVSVYVRPQSLDKAKES 164
Query: 407 ADAVSGEA---LHFEYLH--EFFPE---KGMILANASAIGMEPNSDQSPVPKEA-LKAYE 457
++ +A L F L+ E+F E + +L NA+++GM+ S P+P +
Sbjct: 165 FKSLLEQATCHLEFHALNDLEYFQEELGQADLLVNATSVGMDGES--LPIPTDTKFPEGL 222
Query: 458 LVFDAVYTPRNTRLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPED 508
LV D +Y P T L A + G V+G+ M + QA G F+L+TG P D
Sbjct: 223 LVADIIYQPFETPFLALARKQGIEAVNGLGMLLHQAAGAFKLWTGKDMPTD 273
>gi|392407617|ref|YP_006444225.1| shikimate dehydrogenase [Anaerobaculum mobile DSM 13181]
gi|390620753|gb|AFM21900.1| shikimate dehydrogenase [Anaerobaculum mobile DSM 13181]
Length = 290
Score = 128 bits (322), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 87/298 (29%), Positives = 153/298 (51%), Gaps = 27/298 (9%)
Query: 234 NPDTKIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLV---DDVKEFFRTYSGTDFA 290
N DT+ L NP+ + P+LHN F + N +Y P+ + DD+ + +T +
Sbjct: 5 NVDTRFIALYGNPLKQTLSPLLHNTVFESKKMNNLYYPLEIQSFDDLSKALKTMHVFNVI 64
Query: 291 GFSVGIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALR 350
G +V +P+KE + D + A+ GAVNT++ + L+GYNTD +++ +
Sbjct: 65 GANVTMPYKEKVIELLDGLDKSAEQCGAVNTVVT--TEKGLIGYNTDGMGFLNSFMEEF- 121
Query: 351 ERQGINGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRG-ARVIIFNRNYERAKALADA 409
+ SP GK F+L+GAGGA +A+ F + G ++VI++N + RA +L +
Sbjct: 122 ----------NVSP-EGKTFLLIGAGGAAKAVVFAFLNAGVSKVIVYNNSQTRAMSLLER 170
Query: 410 VS----GEALHFEYLHEFFPEKGM----ILANASAIGMEPNSD-QSPVPKEALKAYELVF 460
V G+ ++ P +G+ I+ NA+ +GM+ ++ QS V ++ + + V
Sbjct: 171 VEKFFPGKCEWRPLNNKPVPPEGIAEADIIINATKVGMKGEAEGQSLVLPDSFRPGQFVC 230
Query: 461 DAVYTPRNTRLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRKLVLEQF 518
D VY P T+LL +A + G ++SG M + QA F+L+ G + + M++ F
Sbjct: 231 DVVYNPPETKLLADAKKAGCKILSGDGMLVYQAAAAFKLWFGIDSDVELMKRTFRNYF 288
>gi|238598730|ref|XP_002394684.1| hypothetical protein MPER_05383 [Moniliophthora perniciosa FA553]
gi|215464118|gb|EEB95614.1| hypothetical protein MPER_05383 [Moniliophthora perniciosa FA553]
Length = 518
Score = 128 bits (322), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 129/495 (26%), Positives = 213/495 (43%), Gaps = 71/495 (14%)
Query: 62 LPAIVSYRLKSSRKSSDEACKNTCLQVLRRALDLDVEFVEMDYEVASDPLMSEIIYSRSN 121
LP + + R S + + + ++L AL L VE+++++ + + + + I SR
Sbjct: 50 LPIVYTVRTASQGGAFPDNAPDKAFELLELALILGVEYIDVEISLPEEKIKTLI--SRKG 107
Query: 122 TKIIVSSYLNGGGKPTTEKLGDVIACMQATGADVMKLEIAVDSITDLAPVFEMLTHCQ-- 179
I++S+ + G M+ GA+V DS+ D+ + + Q
Sbjct: 108 ASQIIASWHDWSGN------------MKWDGAEVQAKYDLADSLGDIVKIVGKANNLQDN 155
Query: 180 ----------------VPLIALAVGSRGLISQLLGPKFGGFLVYGSLGGKSVPGLPTLVS 223
P +A+ +G+ G +S++L + + L ++ PG +
Sbjct: 156 PELQHFVTKVNRRTNAKPFLAINMGTEGQMSRILNTTTTP-VTHPLLPNRAAPGQLSFAE 214
Query: 224 LKQVYQLEHINPDTKIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLVDDV-KEFFR 282
++Q L P K F L NP+ HS P LHN F+ Y D + KE
Sbjct: 215 IQQALHLLGQKPHKK-FYLFGNPISHSLSPTLHNTGFQLLGLPYDYSLFQTDGIGKEIRD 273
Query: 283 TYSGTDFAGFSVGIPHKEPAVACCDEVHPLAKSIGAVNTII-RRPIDGK--LVGYNTDCE 339
+ +F G SV IP K ++ DE+ P AKS+GAVNTI+ + DG L G NTD
Sbjct: 274 IIAAPNFGGASVTIPFKLDIISVLDELSPAAKSMGAVNTIVAKSAADGSRILYGDNTDW- 332
Query: 340 SAISAIEDALRERQGING-VASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGARVI-IFN 397
GI G +++ +P + +++G+GG RA + GA+ I ++N
Sbjct: 333 -------------LGIKGSISARIAPGSIHAALIIGSGGTARAAIYALHDLGAKCIYLYN 379
Query: 398 RNYERAKALADAVSGEALH----FEYLHEFFPEKGMIL----ANASAIGMEPNSDQSPVP 449
R E+A AL + + E P +I+ A ++I +PNS P
Sbjct: 380 RTREKAVALQKEFTEANIQVLDKLGQWSESTPPANIIISTVPATDTSIEPQPNSLYLPA- 438
Query: 450 KEALKAYE----LVFDAVYTPRNTRLLREAAEVGATVVS--GVEMFIRQALGQFRLFTGG 503
+L AY +V D Y P T LL+ A + GVE+ ++Q QF +TG
Sbjct: 439 --SLFAYRDGPGVVIDMAYKPVETPLLKLAITTANNWATAQGVEVLLQQGYYQFEAWTGR 496
Query: 504 LAPEDFMRKLVLEQF 518
AP+ + K V E++
Sbjct: 497 RAPKASISKTVWEKY 511
>gi|374603053|ref|ZP_09676038.1| shikimate 5-dehydrogenase [Paenibacillus dendritiformis C454]
gi|374391366|gb|EHQ62703.1| shikimate 5-dehydrogenase [Paenibacillus dendritiformis C454]
Length = 297
Score = 128 bits (321), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 92/296 (31%), Positives = 141/296 (47%), Gaps = 27/296 (9%)
Query: 233 INPDTKIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLV--DDVKEFFRTYSGTDFA 290
I+ T +F ++ +P+ HSK P++HN A R N +Y V + +++ +
Sbjct: 16 IDSSTAVFAVIGDPIKHSKSPLMHNAALRELGLNAVYTAFHVAPEQLEQAIQGMRALGIG 75
Query: 291 GFSVGIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDA-- 348
G +V IPHKE +A DEV A IGAVNTI+ R +G+L+GYNTD + ++++
Sbjct: 76 GMNVTIPHKEAVMAYLDEVDESASVIGAVNTIVNR--NGRLIGYNTDGLGFVRSLQEEMI 133
Query: 349 --LRERQGINGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGARVIIFNRNYERAKAL 406
LRE + + + G + L+ AG R+ I NR RA+AL
Sbjct: 134 SDLRESRIL--LIGAGGAARGIAYALLKAGCR-------------RLHIANRTLGRAEAL 178
Query: 407 ADAVSG----EALHFEYLHEFFPEKGMILANASAIGMEPNSDQSPVPKEALKAYELVFDA 462
A +S A+ + I+ + +++GM P+ D P + L +V D
Sbjct: 179 AHDLSAFGTVSAVQLGERPAIDAHEVDIVIHTTSVGMHPDVDAVPFDPDWLLPDMIVSDI 238
Query: 463 VYTPRNTRLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRKLVLEQF 518
VY P T LLREA++ G SG+ MF+ Q L+TG AP MR+ V
Sbjct: 239 VYNPLETALLREASKRGCRPHSGLGMFVYQGAIALELWTGAAAPAALMREQVWNTL 294
>gi|448342902|ref|ZP_21531846.1| shikimate 5-dehydrogenase [Natrinema gari JCM 14663]
gi|445624483|gb|ELY77865.1| shikimate 5-dehydrogenase [Natrinema gari JCM 14663]
Length = 267
Score = 128 bits (321), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 113/280 (40%), Positives = 147/280 (52%), Gaps = 25/280 (8%)
Query: 238 KIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPML--VDDVKEFFRTYSGTDFAGFSVG 295
++GLV NPVGHS P +H A+ Y DD+++ R AG +V
Sbjct: 2 DVYGLVGNPVGHSLSPPMHEAAYDELGLEARYATFEPEADDIEDAIRGADALGIAGLNVT 61
Query: 296 IPHKEPAVACCDEVHP--LAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALRERQ 353
IP K+ A + V P LA IGAVNTI G GYNTD AI A+ ALRE
Sbjct: 62 IPFKQ---AALEIVAPEDLATRIGAVNTIDFSG-SGPPTGYNTD---AIGALR-ALRE-- 111
Query: 354 GINGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGARVIIFNRNYERAKALADAVSGE 413
H + G+ V+VGAGGAGRA+AFG GA V I NR +A LA AV
Sbjct: 112 -------HDVALEGEQAVVVGAGGAGRAIAFGLTDAGATVAIANRTESKAHDLAAAVPRA 164
Query: 414 ALH-FEYLHEFFPEKGMILANASAIGMEPNSDQSPVPKEALKAYELVFDAVYTPRNTRLL 472
H L E + +L NA+++GM ++D +PVP +AL V DAVY+P TRLL
Sbjct: 165 TGHGLAALEELLADAD-VLVNATSVGM--DADATPVPADALHGDLAVLDAVYSPLETRLL 221
Query: 473 REAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRK 512
++AA+ GAT V G M + Q + F ++TG AP D M +
Sbjct: 222 QDAADAGATTVDGAWMLLYQGVEAFEIWTGQDAPVDVMNE 261
>gi|392428507|ref|YP_006469518.1| shikimate dehydrogenase [Streptococcus intermedius JTH08]
gi|419777500|ref|ZP_14303412.1| shikimate dehydrogenase [Streptococcus intermedius SK54]
gi|383844980|gb|EID82390.1| shikimate dehydrogenase [Streptococcus intermedius SK54]
gi|391757653|dbj|BAM23270.1| shikimate dehydrogenase [Streptococcus intermedius JTH08]
Length = 284
Score = 128 bits (321), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 92/290 (31%), Positives = 144/290 (49%), Gaps = 35/290 (12%)
Query: 232 HINPDTKIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLV--DDVKEFFRTYSGTDF 289
I+ T++ +V+NP+ HS P +HN AF NG+Y+ + DD+K D
Sbjct: 2 KIDGYTRLAAVVANPIKHSISPFIHNAAFEQAGVNGVYLAWEISKDDLKATVENIRRYDM 61
Query: 290 AGFSVGIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDAL 349
G ++ +P+K+ + DE+ P A+ IGAVNT++ + +GKL+GYNTD + ++ +
Sbjct: 62 FGINLSMPYKQAVIPFLDELTPAAQMIGAVNTVVNQ--NGKLIGYNTDGKGFFMSLPSFV 119
Query: 350 RERQGINGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGA-RVIIFNR--NYERA--- 403
I GK +++GAGGA A+ A GA + +F R ++ER
Sbjct: 120 ---------------IKGKKMLILGAGGAATAIIVQAVLEGADEIFVFTRQTSFERVSQQ 164
Query: 404 -KALADAVSGE--ALHFEYLHEFFPEK---GMILANASAIGMEPNSDQSPVPKEA-LKAY 456
K + A S + L E E EK +L N +++GM+ + SPVP L
Sbjct: 165 MKQIQQAASTKISVLPLEQ-RELLQEKLNVSALLVNGTSLGMDEKT--SPVPDTIRLSKT 221
Query: 457 ELVFDAVYTPRNTRLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAP 506
LV D +Y P T L+ A + VV+G+ M + QA F+L+TG P
Sbjct: 222 LLVADVIYQPFETPFLQWAKKQNVQVVNGLGMLLYQAAEAFKLWTGKDMP 271
>gi|312863765|ref|ZP_07724003.1| shikimate dehydrogenase [Streptococcus vestibularis F0396]
gi|311101301|gb|EFQ59506.1| shikimate dehydrogenase [Streptococcus vestibularis F0396]
Length = 285
Score = 128 bits (321), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 93/291 (31%), Positives = 150/291 (51%), Gaps = 33/291 (11%)
Query: 232 HINPDTKIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLV--DDVKEFFRTYSGTDF 289
I+ T++ +V+NP+ HS P +HN AF T+ NG+YV + D+ E +
Sbjct: 2 QIDGHTRLAAVVANPIKHSISPFIHNSAFEKTQVNGVYVAWEIPESDLAETVENIRRYNM 61
Query: 290 AGFSVGIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDAL 349
G ++ +P+KE + DE+ P A+ IGAVNT++ R DG L+G+NTD ++++D
Sbjct: 62 FGINLSMPYKEAVIPFLDEISPAAQLIGAVNTVVNR--DGHLIGHNTDGFGFFASLKD-- 117
Query: 350 RERQGINGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGAR---VIIFNRNYERAKAL 406
SP + +L GAGGA +A+ A GA+ V + ++ ++AK
Sbjct: 118 ------------FSPRDAHLMIL-GAGGAAKAIVTQAVLDGAKKVSVYVRPQSLDKAKES 164
Query: 407 ADAVSGEA---LHFEYLH--EFFPE---KGMILANASAIGMEPNSDQSPVPKEA-LKAYE 457
++ +A L F L+ E+F E + +L NA+++GM+ S P+P +
Sbjct: 165 FKSLLEQATCHLEFHALNDLEYFQEELGQDDLLVNATSVGMDGES--LPIPTDTKFPEGL 222
Query: 458 LVFDAVYTPRNTRLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPED 508
LV D +Y P T L A + G V+G+ M + QA G F+L+TG P D
Sbjct: 223 LVADIIYQPFETPFLALARKQGIEAVNGLGMLLHQAAGAFKLWTGKDMPTD 273
>gi|424787497|ref|ZP_18214263.1| shikimate 5-dehydrogenase [Streptococcus intermedius BA1]
gi|422113792|gb|EKU17519.1| shikimate 5-dehydrogenase [Streptococcus intermedius BA1]
Length = 284
Score = 128 bits (321), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 92/290 (31%), Positives = 144/290 (49%), Gaps = 35/290 (12%)
Query: 232 HINPDTKIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLV--DDVKEFFRTYSGTDF 289
I+ T++ +V+NP+ HS P +HN AF NG+Y+ V DD+K D
Sbjct: 2 KIDGYTRLAAVVANPIKHSISPFIHNAAFEQAGVNGVYLAWEVSKDDLKATVENIRRYDM 61
Query: 290 AGFSVGIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDAL 349
G ++ +P+K+ + DE+ P A+ IGAVNT++ + +GKL+GYNTD + ++ +
Sbjct: 62 FGINLSMPYKQAVIPFLDELTPAAQMIGAVNTVVNQ--NGKLIGYNTDGKGFFMSLPSFV 119
Query: 350 RERQGINGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGA-RVIIFNR--NYERA--- 403
I GK +++GAGGA A+ A GA + +F R ++ER
Sbjct: 120 ---------------IKGKKMLILGAGGAATAIIVQAVLEGADEIFVFTRKTSFERVSQQ 164
Query: 404 -KALADAVSGE--ALHFEYLHEFFPEK---GMILANASAIGMEPNSDQSPVPKEA-LKAY 456
K + A S + L E E EK +L N +++GM+ + SPVP L
Sbjct: 165 MKQIQQAASTKISVLPLEQ-RELLQEKLNVSALLVNGTSLGMDEKT--SPVPDTIRLSKT 221
Query: 457 ELVFDAVYTPRNTRLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAP 506
LV D +Y P T L+ A + V++G+ M + QA F+L+TG P
Sbjct: 222 LLVADVIYQPFETPFLQWAKKQNVQVINGLGMLLYQAAEAFKLWTGKDMP 271
>gi|425436875|ref|ZP_18817305.1| Shikimate dehydrogenase [Microcystis aeruginosa PCC 9432]
gi|389678346|emb|CCH92796.1| Shikimate dehydrogenase [Microcystis aeruginosa PCC 9432]
Length = 302
Score = 128 bits (321), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 82/307 (26%), Positives = 149/307 (48%), Gaps = 29/307 (9%)
Query: 225 KQVYQLEHINPDTKIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLV--DDVKEFFR 282
K + + IN TK+ G++ +P+GH+ P++HN A N +Y+P+ + +++
Sbjct: 12 KPTFFMTIINGKTKLLGVIGDPIGHTLSPLMHNAAIDALGLNYVYLPLPIAPENLATAIA 71
Query: 283 TYSGTDFAGFSVGIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAI 342
S D GFSV IPHK + ++ A+ +GAVNT+ R + G NTD + +
Sbjct: 72 GLSAIDLEGFSVTIPHKLAIIPLLSQITEKARLVGAVNTVWRTKTGWQ--GTNTDVDGFL 129
Query: 343 SAIEDALRERQGINGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRG-ARVIIFNRNYE 401
+ ++ ++ +N V ++G GGA RA+ G ++ + RN +
Sbjct: 130 APLKSLDKDWSRVNPV-------------ILGNGGAARAVVVACAQLGCGKIHVVGRNQK 176
Query: 402 RAKALADAVSGEALH-------FEYLHEFFPEKGMILANASAIGMEPNSDQSPVPKEALK 454
+ ++ + +L+ ++ L P +++ N++ IGM P +QSPV E L
Sbjct: 177 KLDPFKESWANTSLYDLLEVHGWDELEGLLPTTELLI-NSTPIGMSPQGEQSPVELELLD 235
Query: 455 ---AYELVFDAVYTPRNTRLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMR 511
+ + +D +Y PR T+ LR A G ++ G+EM + Q ++ G P MR
Sbjct: 236 LLPSSAIAYDLIYNPRPTKFLRLARTRGIRIIDGLEMLVNQGAIALEIWLGQPVPVSVMR 295
Query: 512 KLVLEQF 518
+ +L+QF
Sbjct: 296 EALLKQF 302
>gi|242281277|ref|YP_002993406.1| shikimate 5-dehydrogenase [Desulfovibrio salexigens DSM 2638]
gi|259585277|sp|C6BUS3.1|AROE_DESAD RecName: Full=Shikimate dehydrogenase
gi|242124171|gb|ACS81867.1| shikimate 5-dehydrogenase [Desulfovibrio salexigens DSM 2638]
Length = 272
Score = 128 bits (321), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 96/288 (33%), Positives = 152/288 (52%), Gaps = 30/288 (10%)
Query: 238 KIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYV--PMLVDDVKEFFRTYSGTDFAGFSVG 295
K+FG++ +P+GH+ P+LHN F + +Y+ P + V+ F +T+ +G SV
Sbjct: 8 KLFGIIGHPLGHTMSPLLHNWGFAEHKIPAVYMAWPTEPEKVESFMQTFRNLPISGASVT 67
Query: 296 IPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDG-KLVGYNTDCESAISAIEDALRERQG 354
IPHK + D++ A+S+GAVNT+ DG K+VG NTD
Sbjct: 68 IPHKLSVMDYIDQLTERAESVGAVNTLYW---DGDKIVGDNTDAA--------------- 109
Query: 355 INGVASHTSPIAGKI--FVLVGAGGAGRALAFGAKSRGAR-VIIFNRNYERAKALADAVS 411
GV+ P + +I +L+GAGGA RA G +S G + + I NR +A LA
Sbjct: 110 --GVSEPLRPYSDQIKKALLIGAGGAARAAITGLQSLGIKEIFITNRTKSKADDLAAEFK 167
Query: 412 GEALHFEYLHEFFPEKGMILANASAIGMEPNSDQ-SPVPKEALKAYELVFDAVYTPRNTR 470
AL ++ + + ++ N++++GM ++ +P+ E ++FD VY P T
Sbjct: 168 ISALDWDARGD---QHLDLIVNSTSLGMSGKFEEINPMIMENQDKNTIIFDLVYNPLETV 224
Query: 471 LLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRKLVLEQF 518
L+R+A G TV+ G+EMF+ Q L QFRL+TG E R+L+LE+
Sbjct: 225 LIRKAKSKGCTVIHGIEMFVHQGLEQFRLWTGIKLDEKKARELLLEKL 272
>gi|392989569|ref|YP_006488162.1| shikimate 5-dehydrogenase [Enterococcus hirae ATCC 9790]
gi|392336989|gb|AFM71271.1| shikimate 5-dehydrogenase [Enterococcus hirae ATCC 9790]
Length = 287
Score = 127 bits (320), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 91/300 (30%), Positives = 146/300 (48%), Gaps = 31/300 (10%)
Query: 233 INPDTKIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLVD--DVKEFFRTYSGTDFA 290
I+ TK+ G + P HS P++HN AF H + +Y+ VD ++++ + D
Sbjct: 2 ISGKTKLTGFFAKPASHSLSPLMHNLAFSHWGIDAVYLAFEVDQTNLRQAVESIRTLDML 61
Query: 291 GFSVGIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALR 350
G +V +P+K +A D++ P A+ IGAVNTI+ + + +L+GYNTD + ++ +
Sbjct: 62 GVNVSMPNKTAVLAYLDQLSPEAELIGAVNTIVHQ--EQRLIGYNTDGMGFVRSVNET-- 117
Query: 351 ERQGINGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGARVII----FNRNYERAKAL 406
PI + V++GAGGA +A+ GA+ I N + K
Sbjct: 118 -----------GHPIKNQKIVVLGAGGAAKAIVVQMALEGAQEITIYKRLNATFLPLKEY 166
Query: 407 ADAVSGEALHFEYLHEFFPEKGM--------ILANASAIGMEPNSDQSPVPKEALKAYEL 458
VS + LH++ E + +L NA+ IGM DQ P+ L +L
Sbjct: 167 FVKVSEKTGCPIRLHDYADESQLALDLSQANLLINATDIGMGSKKDQLPIADVKLLHSQL 226
Query: 459 -VFDAVYTPRNTRLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRKLVLEQ 517
VFD +Y+P TRL++EA ++G +G+ M I Q F L+T P +R+ LEQ
Sbjct: 227 AVFDLIYSPSETRLIQEAKKMGIKAYNGLGMLIHQGAIAFELWTHREMPVQNIRE-QLEQ 285
>gi|331700628|ref|YP_004397587.1| shikimate dehydrogenase [Lactobacillus buchneri NRRL B-30929]
gi|329127971|gb|AEB72524.1| Shikimate dehydrogenase [Lactobacillus buchneri NRRL B-30929]
Length = 290
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 94/289 (32%), Positives = 147/289 (50%), Gaps = 33/289 (11%)
Query: 233 INPDTKIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLVDD--VKEFFRTYSGTDFA 290
I+ TK+FGL+++P HS P++HN +F+ T NGIY+ V + +
Sbjct: 2 IDGHTKLFGLLAHPAAHSLSPLIHNTSFQVTGINGIYLAFDVTSAGLADSLAAMRAMHIG 61
Query: 291 GFSVGIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALR 350
GF++ +P K + DE+ P A+ + AVNT+I R DG+L+G +TD + + DAL+
Sbjct: 62 GFNLSMPLKTDVLPLLDEITPRAERLSAVNTVINR--DGRLIGDSTDGQGWV----DALK 115
Query: 351 ERQGINGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGAR-VIIFNRNYERAKALADA 409
+ I K+ ++GAGGAGRA+ A GA+ V +F R + +A +
Sbjct: 116 QDD---------MTIDEKVVTVLGAGGAGRAIISAAVDAGAKQVYVFKRTNDLFEARKEQ 166
Query: 410 VSGEA-----LHFE---YLHEFFPEKGMILANASAIGMEPNSDQS-PVPKEA---LKAYE 457
+ G + L +E + E F E I+ANA+ +GM DQS PV + L
Sbjct: 167 LEGWSDVVTVLPYEDEGLIAEAFDES-QIIANATNVGMA--GDQSLPVSQSVMNHLTPQH 223
Query: 458 LVFDAVYTPRNTRLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAP 506
+V DA+Y P T + A + G+ +G+ M + QA G F +TG P
Sbjct: 224 IVSDAIYFPLETPFIHAAKQRGSRTYNGIGMLVNQAAGSFLEWTGQRMP 272
>gi|291545243|emb|CBL18352.1| shikimate 5-dehydrogenase [Ruminococcus champanellensis 18P13]
Length = 281
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 85/272 (31%), Positives = 134/272 (49%), Gaps = 42/272 (15%)
Query: 237 TKIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLVDDVKEFF--RTYSGTDFAGFSV 294
++ +GL+ +P+GHS P LH F + Y L+D E + T + G++V
Sbjct: 2 SEAYGLIGHPLGHSMSPFLHKALFALGGKDASY--RLLDLAPETMEQQVQDMTGYLGWNV 59
Query: 295 GIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALRERQG 354
IP+KE + D + P A AVN + R P DG L GYNTDC + A+ D
Sbjct: 60 TIPYKERIIPLLDRLDPSAARYNAVNCVRREP-DGTLTGYNTDCTGFLHAVRD------- 111
Query: 355 INGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGARVIIFNRNYERAKALADAVSGEA 414
+ G++ +L+G GGAGR +A A + GA++ I RN E+ + A A
Sbjct: 112 --------FSLGGRV-LLLGCGGAGRMMATEAATAGAQLTIGVRNPEKPELTALAA---- 158
Query: 415 LHFEYLHEFFPEKGM-------------ILANASAIGMEPNSDQSPVPKEALKAYELVFD 461
+L + +P G+ +L N++ +GM P+++ PVP ++ VFD
Sbjct: 159 ----HLRKAYPAAGVQLLPFGEISGDFDLLLNSTPVGMFPHTEGCPVPDAVIRRCGAVFD 214
Query: 462 AVYTPRNTRLLREAAEVGATVVSGVEMFIRQA 493
A+Y P TRL+ A + G V G++M ++QA
Sbjct: 215 AIYNPEQTRLMELARQAGIPTVGGMDMLVQQA 246
>gi|154485097|ref|ZP_02027545.1| hypothetical protein EUBVEN_02820 [Eubacterium ventriosum ATCC
27560]
gi|149734050|gb|EDM50169.1| shikimate dehydrogenase [Eubacterium ventriosum ATCC 27560]
Length = 289
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 91/296 (30%), Positives = 144/296 (48%), Gaps = 29/296 (9%)
Query: 230 LEHINPDTKIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLV--DDVKEFFRTYSGT 287
+ I T++ GL+ +PV HSK P++HN A+R + +Y+ V ++++ F
Sbjct: 4 ISEITGQTRLTGLLGSPVSHSKSPLMHNEAYRLLGLDYVYLCFDVPENNLQVAFEGLKKL 63
Query: 288 DFAGFSVGIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIED 347
+ AGF+ +P K DE+ P AK IGAVNT++ +GK VG+NTD I +++D
Sbjct: 64 NVAGFNCTMPDKTLMSKLVDELSPAAKIIGAVNTVVND--NGKFVGHNTDGTGYIRSLQD 121
Query: 348 ALRERQGINGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGARVI----IFNRNYERA 403
H I GK L+G+GGA ++ A GAR I I + + +A
Sbjct: 122 -----------CGHN--IVGKKMTLLGSGGAASSICVQAALDGAREIDVLSIKDNFWSKA 168
Query: 404 KALADAVSGEALHFEYLHEFFPE-------KGMILANASAIGMEPNSDQSPVPKEALKAY 456
+ L ++ L E + IL NA+ IGM PN+D V ++
Sbjct: 169 EKLVSDINDNTDCKVNLIEMNDDSIGESVFSSDILTNATPIGMAPNTDGCLVKDSSILRP 228
Query: 457 ELVF-DAVYTPRNTRLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMR 511
EL+ D +Y P T+L + A E G +V +G+ M + Q F L+TG P + ++
Sbjct: 229 ELIVSDIIYNPLETKLYKMAKEKGCSVFNGLYMLLYQGAEAFFLWTGKEMPTEEIK 284
>gi|217963602|ref|YP_002349280.1| shikimate 5-dehydrogenase [Listeria monocytogenes HCC23]
gi|386009012|ref|YP_005927290.1| shikimate 5-dehydrogenase, putative [Listeria monocytogenes L99]
gi|386027625|ref|YP_005948401.1| putative shikimate 5-dehydrogenase [Listeria monocytogenes M7]
gi|217332872|gb|ACK38666.1| shikimate dehydrogenase [Listeria monocytogenes HCC23]
gi|307571822|emb|CAR85001.1| shikimate 5-dehydrogenase, putative [Listeria monocytogenes L99]
gi|336024206|gb|AEH93343.1| putative shikimate 5-dehydrogenase [Listeria monocytogenes M7]
Length = 289
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 90/300 (30%), Positives = 147/300 (49%), Gaps = 37/300 (12%)
Query: 233 INPDTKIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPM-----LVDDVKEFFRTYSGT 287
I+ T++ GL+ P+ HSK PI++N +F+ + Y+ V D + RT+
Sbjct: 5 ISGTTRLLGLIGTPIDHSKSPIMYNYSFQKAGLDYAYLAFDTPIQKVADTIKAIRTF--- 61
Query: 288 DFAGFSVGIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIED 347
+ G +V +P K + D++ P A+ IGAVNTI+ DGKL G+ TD I+ + D
Sbjct: 62 NLRGANVTMPCKSEVLKHMDDLSPAARMIGAVNTIVNE--DGKLTGHITDGLGFIANLRD 119
Query: 348 ALRERQGINGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGAR-VIIFNRN---YERA 403
A + + GK ++GAGGA A+ GA+ + IFN Y++A
Sbjct: 120 A-------------SVDVTGKKMTIIGAGGAATAIQVQCALDGAKEITIFNIKDAFYDKA 166
Query: 404 KALADAVSGEALH-FEYLHEFFPEKGM--------ILANASAIGMEPNSDQSPVPKEALK 454
K ++ E H ++++ + + IL NA+ +GM PN ++P+ ++
Sbjct: 167 KQTVASIKQEVPHCIVHIYDLNDTEKLNAEIATSDILVNATLVGMHPNEHETPISNTSVF 226
Query: 455 AYEL-VFDAVYTPRNTRLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRKL 513
EL V D +Y P+ T+LL +A G V G+ M + Q ++LFTG P +R L
Sbjct: 227 RKELIVTDIIYNPKKTQLLLDAEAAGCKTVGGLGMLLWQGAEAYKLFTGKDMPVSEVRDL 286
>gi|288818612|ref|YP_003432960.1| shikimate 5-dehydrogenase [Hydrogenobacter thermophilus TK-6]
gi|384129366|ref|YP_005511979.1| shikimate 5-dehydrogenase [Hydrogenobacter thermophilus TK-6]
gi|288788012|dbj|BAI69759.1| shikimate 5-dehydrogenase [Hydrogenobacter thermophilus TK-6]
gi|308752203|gb|ADO45686.1| shikimate 5-dehydrogenase [Hydrogenobacter thermophilus TK-6]
Length = 270
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 85/279 (30%), Positives = 137/279 (49%), Gaps = 28/279 (10%)
Query: 232 HINPDTKIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLV--DDVKEFFRTYSGTDF 289
+++ T+++G+V PV HS P+ N F + + +YVP V D KE F
Sbjct: 2 NLSGKTEVYGIVGFPVKHSLSPVFQNAFFEYLSLDAVYVPFEVKPDSFKEAFLGLKALGV 61
Query: 290 AGFSVGIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDAL 349
G ++ +P KE A CD +K I AVNT+ ++ GYNTD + A+ +
Sbjct: 62 KGVNITVPFKERAFELCDLSDEPSKVIRAVNTV---KFTDRIEGYNTDWIGFLRALRELE 118
Query: 350 RERQGINGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGARVIIFNRNYERAKALADA 409
+E + GK +++GAGG +A+ + G + IFNR YERA LA
Sbjct: 119 KE-------------LEGKKVLVLGAGGTAKAVVYALSREGCYIYIFNRTYERAIELARN 165
Query: 410 VSGEALHFEYLHEFFPEKGMILANASAIGMEPNSDQSP--VPKEALKAYELVFDAVYTPR 467
S + + E + I+ N +++G+ SD P + L+ + +VFD +Y R
Sbjct: 166 FSAQVVK---KPEDVLDDADIIINTTSVGL---SDDDPPLFDYQMLRDHHIVFDVIY--R 217
Query: 468 NTRLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAP 506
+T L++ A + GA +G+ M I Q + FR++TG AP
Sbjct: 218 STPLVKTALKKGAKAQNGLSMLIYQGMESFRIWTGLEAP 256
>gi|392586617|gb|EIW75953.1| Pentafunctional AroM protein [Coniophora puteana RWD-64-598 SS2]
Length = 1637
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 139/528 (26%), Positives = 228/528 (43%), Gaps = 63/528 (11%)
Query: 32 VEGADLVELCIDSMEF-----------------SHISE-VDKLIQHPTLPAIVSYRLKSS 73
VEG D +EL +D + ++++E + L + +LP + + R S
Sbjct: 1128 VEGVDALELRVDLLRAPKDLDKPVAPGTYIPPAAYVAEQLAALRRATSLPIVFTVRTVSQ 1187
Query: 74 RKSSDEACKNTCLQVLRRALDLDVEFVEMDYEVASDPLMSEIIYSRSN---TKIIVSSYL 130
+ + + ++L A+ VE+V D E+ D + + +R++ ++I+ S +
Sbjct: 1188 GGAFPDGAEKEAFELLELAVKNGVEYV--DVEITFDQQRIKELATRAHRGHSQIVASFHD 1245
Query: 131 NGGGKPTTEKLGDVIACMQATGADVMKLEIAVDSITDLAPVFEMLTHCQV-----PLIAL 185
G +E L + + +D++K+ + + D +FE ++ + P+IA+
Sbjct: 1246 WSGSMKWSEALVKDKYKVASELSDIVKIVGKANELKDNFALFEFVSRVEAQPGAKPIIAI 1305
Query: 186 AVGSRGLISQLLGPKFGGFLVYGSLGGKSVPGLPTLVSLKQVYQLEHINPDTKIFGLVSN 245
+G+ G +S++L + + L K+ PG + ++Q L P + F L
Sbjct: 1306 NMGAEGQLSRVLNRTLTP-VTHPLLPSKAAPGQLSFAQIQQALHLAGQLPARRFF-LFGT 1363
Query: 246 PVGHSKGPILHNPAFRHTRFNGIYVPMLVDDVKEFFR-TYSGTDFAGFSVGIPHKEPAVA 304
P+ S P LHN F Y + DV E R T + DF G SV IPHK +
Sbjct: 1364 PISQSPSPTLHNTGFATLGLPHQYDLLETSDVGEQIRATLASPDFGGASVTIPHKLDVMP 1423
Query: 305 CCDEVHPLAKSIGAVNTIIRRPIDGK----LVGYNTDCESAISAIEDALRERQGINGVAS 360
D + P A++IGAVNTII LVG NTD + + E+Q
Sbjct: 1424 LLDRLTPAAEAIGAVNTIIPTSEGASGARILVGDNTDW----LGMRACILEKQ------- 1472
Query: 361 HTSPIAGKIFVLVGAGGAGRALAFGAKSRGA-RVIIFNRNYERAKALADAVSGEALHFEY 419
S A +++GAGG RA + +S GA R+ + NR +A+AL DA +
Sbjct: 1473 -PSLAAPAAALVIGAGGTARAAIYALQSLGAKRIYVHNRTAAKAQALVDAFPNARVEVVE 1531
Query: 420 LHEFFPEKG------MILANASAIGMEPNSDQSPVPKEALKAYELVFDAVYTPRNTRLL- 472
+P + A+A A G+ V A +V D Y P T LL
Sbjct: 1532 RLGAWPGDAPSVIISTVPASAGAAGLPETLFDKAV------ARGIVVDMAYKPAETPLLA 1585
Query: 473 --REAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRKLVLEQF 518
R A VSGVE+ + Q QF +TG AP+ +++ VLE +
Sbjct: 1586 LARSVASQSWATVSGVEVLLAQGYEQFERWTGRKAPKGVVQRAVLEMY 1633
>gi|335433606|ref|ZP_08558426.1| shikimate 5-dehydrogenase [Halorhabdus tiamatea SARL4B]
gi|334898612|gb|EGM36716.1| shikimate 5-dehydrogenase [Halorhabdus tiamatea SARL4B]
Length = 265
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 101/287 (35%), Positives = 136/287 (47%), Gaps = 29/287 (10%)
Query: 238 KIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPML--VDDVKEFFRTYSGTDFAGFSVG 295
++GL+ NPV HS P +H A+ + YV VD +E +G +V
Sbjct: 2 DVYGLLGNPVEHSLSPPMHEAAYDELGIDARYVTFEPPVDAAREAVAAAETLGVSGLNVT 61
Query: 296 IPHKEPAVACCDEVHPLAKSIGAVNTII---RRPIDGKLVGYNTDCESAISAIEDALRER 352
IP K+ + E LA IGAVNTI RP G+NTD A+ A+E
Sbjct: 62 IPFKQDVLGAV-EADDLASRIGAVNTIDFSGERP-----TGHNTDALGAVRALE------ 109
Query: 353 QGINGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGARVIIFNRNYERAKALADAVSG 412
H ++G+ V+ G RA+ FG G V I NR E A LA V G
Sbjct: 110 -------RHDVALSGQAVVVGAGGAG-RAITFGLADEGMDVAIANRTVETAHELATEVPG 161
Query: 413 EALH-FEYLHEFFPEKGMILANASAIGMEPNSDQSPVPKEALKAYELVFDAVYTPRNTRL 471
+ H + L + +L NA+++GM+ D+SPVP AL A V DAVY+P TRL
Sbjct: 162 ASGHGLDALDSLLADAD-VLVNATSVGMD--EDRSPVPATALHAGLAVLDAVYSPIQTRL 218
Query: 472 LREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRKLVLEQF 518
LREAA G+T V G M + Q + F +TG AP D M + E+
Sbjct: 219 LREAAAAGSTTVDGAWMLLFQGVEAFERWTGRDAPVDVMNAALRERL 265
>gi|414076194|ref|YP_006995512.1| shikimate dehydrogenase [Anabaena sp. 90]
gi|413969610|gb|AFW93699.1| shikimate dehydrogenase [Anabaena sp. 90]
Length = 288
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 76/280 (27%), Positives = 141/280 (50%), Gaps = 26/280 (9%)
Query: 233 INPDTKIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLV--DDVKEFFRTYSGTDFA 290
I T++ G++ +PV HS P++HN A + +Y+P V ++++ ++
Sbjct: 2 ITGKTQLLGVIGHPVSHSLSPLMHNAALAKLGLDYVYLPFPVAPENLERAIAGFASIGVV 61
Query: 291 GFSVGIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALR 350
GFS+ IPHK+ + E+ P+A++IGAVNT+ R+ VG NTD I+ ++
Sbjct: 62 GFSITIPHKQAILPLLSEISPIAQAIGAVNTVTRQ--GDNWVGTNTDVAGFIAPLQTTYH 119
Query: 351 ERQGINGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRG-ARVIIFNRNYERAKALADA 409
+ + K V++G GGA RA+ G G A + + RN ++ +A +
Sbjct: 120 QDW------------SQKKAVILGNGGAARAVVAGCIQLGLAEIHVVGRNLQKLQAFTQS 167
Query: 410 VSGEALHFEY-LHEF--FP---EKGMILANASAIGMEPNSDQSPVPKEA---LKAYELVF 460
++ +HE+ P + +L N + +GM P+ D+SP+ + L +V+
Sbjct: 168 WQNSPFADKFQVHEWQELPNLLHQANLLVNTTPMGMYPHVDESPLSSQEMGYLPGDAIVY 227
Query: 461 DAVYTPRNTRLLREAAEVGATVVSGVEMFIRQALGQFRLF 500
D +Y P+ T+ L A + GA ++ G+EM ++Q +++
Sbjct: 228 DLIYIPKPTKFLHLAEKQGAIMIDGLEMLVQQGAAALKIW 267
>gi|448344727|ref|ZP_21533630.1| shikimate 5-dehydrogenase [Natrinema altunense JCM 12890]
gi|445637295|gb|ELY90449.1| shikimate 5-dehydrogenase [Natrinema altunense JCM 12890]
Length = 267
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 110/280 (39%), Positives = 146/280 (52%), Gaps = 25/280 (8%)
Query: 238 KIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLV--DDVKEFFRTYSGTDFAGFSVG 295
++GL+ NPVGHS P +H A+ Y DD+ + R AG +V
Sbjct: 2 DVYGLLGNPVGHSLSPPMHEAAYEELGLEARYATFEPEEDDIGDAIRGADALGIAGLNVT 61
Query: 296 IPHKEPAVACCDEVHP--LAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALRERQ 353
IP K+ A + V P LA IGAVNTI G GYNTD A+ A LRE
Sbjct: 62 IPFKQ---AVLEIVAPEDLATRIGAVNTI-DFAGSGPPTGYNTDAVGALRA----LRE-- 111
Query: 354 GINGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGARVIIFNRNYERAKALADAVSGE 413
H + G+ V+VGAGGAGRA+AFG GA V + NR +A+ LA AV
Sbjct: 112 -------HDVALEGEQAVVVGAGGAGRAIAFGLADAGATVAVANRTESKARDLAAAVPRA 164
Query: 414 ALH-FEYLHEFFPEKGMILANASAIGMEPNSDQSPVPKEALKAYELVFDAVYTPRNTRLL 472
H L E + +L NA+++GM ++D +PVP++AL V DAVY+P TRLL
Sbjct: 165 TGHGLAALEELLADAD-VLVNATSVGM--DADATPVPEDALHGGLAVLDAVYSPLETRLL 221
Query: 473 REAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRK 512
R+AA+ GAT V G M + Q + F ++TG AP D M +
Sbjct: 222 RDAADAGATTVDGAWMLLYQGVEAFEIWTGQDAPVDVMNE 261
>gi|308069993|ref|YP_003871598.1| shikimate dehydrogenase [Paenibacillus polymyxa E681]
gi|305859272|gb|ADM71060.1| Shikimate dehydrogenase [Paenibacillus polymyxa E681]
Length = 289
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 91/297 (30%), Positives = 142/297 (47%), Gaps = 40/297 (13%)
Query: 239 IFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLV--DDVKEFFRTYSGTDFAGFSVGI 296
+ G++ +P+ HSK P++H A + G +VP+ V D +++ + F G +V I
Sbjct: 15 LLGVLGDPIKHSKSPLMHKIALQAAGIEGDFVPLHVKPDQLEDAMKGIRAMHFRGVNVTI 74
Query: 297 PHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALRERQGIN 356
PHK + DE+ A+ IGAVNTI+ +G+L GYNTD + + L+E ++
Sbjct: 75 PHKVEVMKYLDEIDEGARLIGAVNTIVND--NGRLKGYNTDGIGYVRS----LKEETSVD 128
Query: 357 GVASHTSPIAGKIFVLVGAGGAGRALAFGA-KSRGARVIIFNRNYERAKALADAVSGEAL 415
+ G ++GAGGA R + + + VII NR ++A+ LA
Sbjct: 129 --------LKGARIAVLGAGGAARGVIHALLEEQPESVIILNRTRDKAEQLA-------- 172
Query: 416 HFEYLHEFFPEKGM-------------ILANASAIGMEPNSDQSPVPKEALKAYELVFDA 462
E+ E P +G +L N +++GM P S + P+ + +V D
Sbjct: 173 -LEWTTEAIPVRGYSNEDAKSVLATVNVLINTTSVGMSPLSGELPLEASLIPEGIIVSDL 231
Query: 463 VYTPRNTRLLREAAEV-GATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRKLVLEQF 518
+Y P TRLLRE+ E G TV G+ MF+ Q F FTG + + MR VL
Sbjct: 232 IYNPLETRLLRESREQRGCTVHGGLGMFVYQGAVAFEYFTGVVPAVEQMRAAVLSSL 288
>gi|322372563|ref|ZP_08047099.1| shikimate dehydrogenase [Streptococcus sp. C150]
gi|321277605|gb|EFX54674.1| shikimate dehydrogenase [Streptococcus sp. C150]
Length = 285
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 94/292 (32%), Positives = 151/292 (51%), Gaps = 35/292 (11%)
Query: 232 HINPDTKIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLV--DDVKEFFRTYSGTDF 289
I+ T++ +V+NP+ HS P +HN AF T+ NG+Y+ + D+ E D
Sbjct: 2 QIDGYTRLAAVVANPIKHSISPFIHNLAFEKTQVNGVYLAWEIPESDLAETVENIRRYDM 61
Query: 290 AGFSVGIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDAL 349
G ++ +P+K+ ++ DE+ P A+ IGAVNT++ R DG L+G+NTD +++++
Sbjct: 62 FGINLSMPYKQKVISFLDELSPAAQLIGAVNTVVNR--DGHLIGHNTDGFGFFASLKN-- 117
Query: 350 RERQGINGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGA-RVIIFNR--NYERA--- 403
SP + +L GAGGA +A+ A GA +V I+ R + ++A
Sbjct: 118 ------------FSPKGAHLMIL-GAGGAAKAIVTQAVLDGAKKVSIYVRPQSLDKAKNS 164
Query: 404 -KALADAVSGEALHFEYLH--EFFPE---KGMILANASAIGMEPNSDQSPVPKEALKAYE 457
K L D G L F L ++F E K +L NA+++GM+ S P+ K+ +
Sbjct: 165 FKTLMDQTDGH-LEFHALSDVDYFQEELGKADLLVNATSVGMDGKS--LPIAKDTIFPKG 221
Query: 458 LVF-DAVYTPRNTRLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPED 508
L+ D +Y P T L A + G V+G+ M + QA G F+L+TG P D
Sbjct: 222 LLIADIIYQPFETPFLALARQQGLEAVNGLGMLLHQAAGAFKLWTGKDMPTD 273
>gi|441472052|emb|CCQ21807.1| Shikimate dehydrogenase [Listeria monocytogenes]
gi|441475188|emb|CCQ24942.1| Shikimate dehydrogenase [Listeria monocytogenes N53-1]
Length = 283
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 92/297 (30%), Positives = 148/297 (49%), Gaps = 37/297 (12%)
Query: 233 INPDTKIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLVDDVKEFFRTYSGTDFAGF 292
I+ T++ GL+ PV HSK PI++N +F+ + Y+ +K +T+ + G
Sbjct: 5 ISGTTRLLGLIGTPVDHSKSPIMYNHSFQKAGLDYAYLAFDTPTIKAI-KTF---NLRGA 60
Query: 293 SVGIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALRER 352
+V +P K + D++ P A+ IGAVNTI+ DGKL G+ TD I+ + DA
Sbjct: 61 NVTMPCKSEVLKYMDDLSPAARMIGAVNTIVNE--DGKLTGHITDGLGFIANLRDA---- 114
Query: 353 QGINGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGAR-VIIFNRN---YERAKALAD 408
+ +AGK ++GAGGA A+ GA+ + IFN Y++AK A
Sbjct: 115 ---------SVDVAGKKMTIIGAGGAATAIQVQCALDGAKEITIFNIKDAFYDKAKQTAA 165
Query: 409 AVSGEA----LHFEYLHEFFPEK-------GMILANASAIGMEPNSDQSPVPKEALKAYE 457
++ E +H L++ EK IL NA+ +GM PN ++P+ ++ E
Sbjct: 166 SIKQEVPNCIVHIYDLND--TEKLNAEITTSDILVNATLVGMHPNEHETPISDTSVFRKE 223
Query: 458 LVF-DAVYTPRNTRLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRKL 513
L+ D +Y P+ T+LL +A G V G+ M + Q ++LFTG P ++ L
Sbjct: 224 LIVADIIYNPKKTQLLLDAEAAGCKTVGGLGMLLWQGAEAYKLFTGEDMPVSEVKDL 280
>gi|284802683|ref|YP_003414548.1| shikimate 5-dehydrogenase [Listeria monocytogenes 08-5578]
gi|284995825|ref|YP_003417593.1| shikimate 5-dehydrogenase [Listeria monocytogenes 08-5923]
gi|404414320|ref|YP_006699907.1| shikimate 5-dehydrogenase [Listeria monocytogenes SLCC7179]
gi|284058245|gb|ADB69186.1| shikimate 5-dehydrogenase [Listeria monocytogenes 08-5578]
gi|284061292|gb|ADB72231.1| shikimate 5-dehydrogenase [Listeria monocytogenes 08-5923]
gi|404240019|emb|CBY61420.1| putative shikimate 5-dehydrogenase [Listeria monocytogenes
SLCC7179]
Length = 289
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 90/301 (29%), Positives = 147/301 (48%), Gaps = 35/301 (11%)
Query: 231 EHINPDTKIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPML--VDDVKEFFRTYSGTD 288
I+ T++ GL+ P+ HSK PI++N +F+ + Y+ + V + + +
Sbjct: 3 NRISGTTRLLGLIGTPIDHSKSPIMYNYSFQKAGLDYAYLAFDTPIQKVADTIKAIKTFN 62
Query: 289 FAGFSVGIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDA 348
G +V +P K + D++ P A+ IGAVNTI+ DGKL G+ TD I+ + DA
Sbjct: 63 LRGANVTMPCKSEVLKYMDDLSPAARMIGAVNTIVNE--DGKLTGHITDGLGFIANLRDA 120
Query: 349 LRERQGINGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGAR-VIIFNRN---YERAK 404
+ +AGK ++GAGGA A+ GA+ + IFN Y++AK
Sbjct: 121 -------------SVDVAGKKMTIIGAGGAATAIQVQCALDGAKEITIFNIKDAFYDKAK 167
Query: 405 ALADAVSGEA----LHFEYLHEFFPEK-------GMILANASAIGMEPNSDQSPVPKEAL 453
A ++ E +H L++ EK IL NA+ +GM PN ++P+ ++
Sbjct: 168 QTAASIKQEVPNCIVHIYDLND--TEKLNAEITTSDILVNATLVGMHPNEHETPISDTSV 225
Query: 454 KAYELVF-DAVYTPRNTRLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRK 512
EL+ D +Y P+ T+LL +A G V G+ M + Q ++LFTG P ++
Sbjct: 226 FRKELIVADIIYNPKKTQLLLDAEAAGCKTVGGLGMLLWQGAEAYKLFTGKDMPVSEVKD 285
Query: 513 L 513
L
Sbjct: 286 L 286
>gi|156743354|ref|YP_001433483.1| shikimate 5-dehydrogenase [Roseiflexus castenholzii DSM 13941]
gi|156234682|gb|ABU59465.1| shikimate 5-dehydrogenase [Roseiflexus castenholzii DSM 13941]
Length = 283
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 97/283 (34%), Positives = 136/283 (48%), Gaps = 27/283 (9%)
Query: 239 IFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLVDDVKEFFRTYS--GTDFAGFSVGI 296
+ G++ +PV HS P LH+ AF H Y R S G +V +
Sbjct: 5 LTGVIGDPVSHSLSPFLHHAAFEHLGIAARYERWQTSSAALPARVASLRAPHVLGANVTL 64
Query: 297 PHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALRERQGIN 356
PHK V D + PLA IGAVNTI+R P DG+L G NTD + I+ LRE G++
Sbjct: 65 PHKIAVVRLLDRLDPLAAQIGAVNTIVRLP-DGQLEGCNTDAPATIAT----LREDAGVD 119
Query: 357 GVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGARVIIFNRNYERAKALADAVSGEALH 416
P ++ +L +G A A +R + + + NR ERA+ L V
Sbjct: 120 -------PAGRRVVILGASGAARAAAFALIGARASMLTVINRTLERAEELLADVLASRDD 172
Query: 417 FEYLHEF------FPEK---GMILANASAIGMEPNSDQSPVPKEALKAYELVFDAVYTPR 467
YL P+ ++ NA+++G + D++P+P + A LVFD VY P
Sbjct: 173 DPYLRALALDDPDVPDAIRAADVIINATSLGW--HRDETPLPGYLIPATALVFDMVYQP- 229
Query: 468 NTRLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFM 510
TRLLREAA+ GA+ + G M +RQA F +TG AP D M
Sbjct: 230 -TRLLREAAQAGASTLDGRGMLVRQAALSFERWTGAPAPLDVM 271
>gi|117923340|ref|YP_863957.1| shikimate dehydrogenase [Magnetococcus marinus MC-1]
gi|170652874|sp|A0L3K8.1|AROE_MAGSM RecName: Full=Shikimate dehydrogenase
gi|117607096|gb|ABK42551.1| shikimate dehydrogenase [Magnetococcus marinus MC-1]
Length = 286
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 90/291 (30%), Positives = 145/291 (49%), Gaps = 31/291 (10%)
Query: 233 INPDTKIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYV--PMLVDDVKEFFRTYSGTDFA 290
IN +T + ++ +PV HS P +HN A RH + N YV P+ ++ + ++
Sbjct: 8 INGETGLLAVIGDPVSHSLSPKMHNLALRHCQLNYCYVALPVKPHNLVRAVQGFAAMGMR 67
Query: 291 GFSVGIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALR 350
GF+ IPHKE + + A IGAVNT++ DGK+ G+NTD I+ +++A R
Sbjct: 68 GFNATIPHKENLLPLMHTLSEEASHIGAVNTVVIDD-DGKMTGHNTDAYGFITGLKEAWR 126
Query: 351 ERQGINGVASHTSPIAGKIFVLVGAGGAGRALAFG-AKSRGARVIIFNRNYERAKALADA 409
S ++G +++G+GGA RA+ +G +++ ARVII NR ERA+AL +A
Sbjct: 127 ------------SDLSGLTAIMLGSGGAARAILYGLIQAKAARVIIANRTIERAQALIEA 174
Query: 410 VSGEALHFEYL------HEFFPEKGMILANASAIGME----PNSDQSPVPKEALKAYELV 459
+ A + + + + E +L N +++G++ P D + +P A V
Sbjct: 175 MQPYAPNTQLMVAPTQADQLPLESCDLLINTTSMGLKGETIPYIDLARLPHHA-----FV 229
Query: 460 FDAVYTPRNTRLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFM 510
D VY T LLR A+ G+ M I Q F L+TG P + +
Sbjct: 230 SDIVYGAHPTPLLRATAQHQLGGQDGLPMLIHQGAKAFELWTGHSMPVELV 280
>gi|340399205|ref|YP_004728230.1| shikimate dehydrogenase [Streptococcus salivarius CCHSS3]
gi|338743198|emb|CCB93706.1| shikimate dehydrogenase [Streptococcus salivarius CCHSS3]
Length = 285
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 92/290 (31%), Positives = 149/290 (51%), Gaps = 31/290 (10%)
Query: 232 HINPDTKIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLV--DDVKEFFRTYSGTDF 289
I+ T++ +V+NP+ HS P +HN AF T+ NG+YV + D+ E +
Sbjct: 2 QIDGHTRLAAVVANPIKHSISPFIHNSAFEKTQVNGVYVAWEIPESDLAETVENIRRYNM 61
Query: 290 AGFSVGIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDAL 349
G ++ +P+KE + DE+ P A+ IGAVNT++ R DG L+G+NTD +++++
Sbjct: 62 FGINLSMPYKEAVIPFLDEISPAAQLIGAVNTVVNR--DGHLIGHNTDGFGFFASLKN-- 117
Query: 350 RERQGINGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGAR---VIIFNRNYERAKAL 406
SP + +L GAGGA +A+ A GA+ V + ++ ++AK
Sbjct: 118 ------------FSPKDAHLMIL-GAGGAAKAIVTQAVLDGAKKVSVYVRPQSLDKAKES 164
Query: 407 ADAVSGEA---LHFEYLH--EFFPE---KGMILANASAIGMEPNSDQSPVPKEALKAYEL 458
++ +A L F L+ E+F E + +L NA+++GM+ S P + K L
Sbjct: 165 FKSLLEQATCHLEFHALNDLEYFQEELGQADLLVNATSVGMDGESLPIPTDTKFPKGL-L 223
Query: 459 VFDAVYTPRNTRLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPED 508
V D +Y P T L A + G V+G+ M + QA G F+L+TG P D
Sbjct: 224 VADIIYQPFETPFLALARKQGIEAVNGLGMLLHQAAGAFKLWTGKDMPTD 273
>gi|171690198|ref|XP_001910024.1| hypothetical protein [Podospora anserina S mat+]
gi|327507669|sp|B2B223.1|ARO1_PODAN RecName: Full=Pentafunctional AROM polypeptide; Includes: RecName:
Full=3-dehydroquinate synthase; Short=DHQS; Includes:
RecName: Full=3-phosphoshikimate
1-carboxyvinyltransferase; AltName:
Full=5-enolpyruvylshikimate-3-phosphate synthase;
Short=EPSP synthase; Short=EPSPS; Includes: RecName:
Full=Shikimate kinase; Short=SK; Includes: RecName:
Full=3-dehydroquinate dehydratase;
Short=3-dehydroquinase; Includes: RecName: Full=Shikimate
dehydrogenase
gi|170945047|emb|CAP71158.1| unnamed protein product [Podospora anserina S mat+]
Length = 1567
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 150/517 (29%), Positives = 237/517 (45%), Gaps = 79/517 (15%)
Query: 32 VEGADLVELCIDSMEFSH----ISEVDKLIQHPTLPAIVSYR-LKSSRKSSDEACKNTCL 86
V G+D VEL +D +E + ++V L +P + + R + K D+ K L
Sbjct: 1067 VVGSDAVELRVDLLESLNPEFVATQVALLRSAAKIPIVYTIRTISQGGKFPDDDYKR-AL 1125
Query: 87 QVLRRALDLDVEFVEMDYEVASDPLMSEIIYSRSNTKIIVS--------SYLNGGGKPTT 138
++ + L VE+++++ + D L + + ++ T II S S+ NGG P
Sbjct: 1126 ELYQIGLRTGVEYLDLEMTMPEDVLQT-VTETKGFTHIIASHHDPENKLSWKNGGWIPFY 1184
Query: 139 EK---LGDVIACMQATGADVMKLEIAVD-SITDLAPVFEMLTHCQVPLIALAVGSRGLIS 194
K GDVI + M E++ + +T+ ML + P+IAL +G+ G +S
Sbjct: 1185 NKALQYGDVIKLVG------MAREVSDNFDLTNFK--MRMLEAHKKPIIALNMGTAGKLS 1236
Query: 195 QLLGPKFGGFLV---YGSLGGKSVPGLPTLVSLKQVYQL-EHINPDTKIFGLVSNPVGHS 250
++L GFL + +L K+ PG + ++Q L + P K F L P+ S
Sbjct: 1237 RVLN----GFLTPVSHPALPSKAAPGQLSAAEIRQALSLVGELEP--KSFYLFGKPISSS 1290
Query: 251 KGPILHNPAFRHTRFNGIYVPMLVD---DVKEFFRTYSGTDFAGFSVGIPHKEPAVACCD 307
+ P LHN F T Y D DVK+ R+ DF G SV IP K + D
Sbjct: 1291 RSPALHNGLFAQTGLPHQYSLFETDVAADVKDIIRS---ADFGGASVTIPLKLDIIPLLD 1347
Query: 308 EVHPLAKSIGAVNTIIRRPIDGK----LVGYNTDCESAISAIEDALRERQGINGVA--SH 361
EV A +IGAVNT+I +G L G NTD + ++ A G+A +
Sbjct: 1348 EVSDAATAIGAVNTVIPVSPEGSDKTILRGDNTDWMGMVFSLRQA--------GIAPRTK 1399
Query: 362 TSPIAGKIFVLVGAGGAGRALAFGAKSRGARVI-IFNRNYERAKALADAVSGEALHFEYL 420
T+P AG ++VG+GG RA + G I I R+ +R KA+AD+ E + + L
Sbjct: 1400 TNPGAG---MVVGSGGTTRAAVYALHDLGYSPIHIVARSPDRVKAIADSFP-EDYNIQTL 1455
Query: 421 HEFFPEKGMILANA------SAIGMEPNSDQSPV---------PKEALKAYELVFDAVYT 465
PE+ +A S+I + DQS P ++ K ++ + YT
Sbjct: 1456 ST--PEEVKAATDALPTVVISSIPADKPIDQSMREVLVASLRHPAKSEKEPRVLLEMAYT 1513
Query: 466 PRNTRLLREAAEVGATVVSGVEMFIRQALGQFRLFTG 502
PR+T L++ A + G + G+E+ Q QF+L+TG
Sbjct: 1514 PRHTPLMQLAEDAGWKTIPGLEVLAAQGWYQFQLWTG 1550
>gi|300711893|ref|YP_003737707.1| shikimate 5-dehydrogenase [Halalkalicoccus jeotgali B3]
gi|448295583|ref|ZP_21485647.1| shikimate 5-dehydrogenase [Halalkalicoccus jeotgali B3]
gi|299125576|gb|ADJ15915.1| shikimate 5-dehydrogenase [Halalkalicoccus jeotgali B3]
gi|445583682|gb|ELY38011.1| shikimate 5-dehydrogenase [Halalkalicoccus jeotgali B3]
Length = 273
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 103/277 (37%), Positives = 137/277 (49%), Gaps = 23/277 (8%)
Query: 239 IFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLVD--DVKEFFRTYSGTDFAGFSVGI 296
++GL+ NPVGHS P +H A+R + YV D ++ S G +V I
Sbjct: 3 VYGLLGNPVGHSLSPPMHEAAYRELGMDARYVTFEPDPESLEAAISGASALGIKGLNVTI 62
Query: 297 PHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALRERQGIN 356
P K+ + E+ LA IGAVNTI + G GYNTD A A+E
Sbjct: 63 PFKQEVLTLV-ELDDLADRIGAVNTI---DLTGTPTGYNTDAAGARRALE---------- 108
Query: 357 GVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGARVIIFNRNYERAKALADAVSGEALH 416
H + G VL+GAGGA RA+AF GA + I NR ERA+ LA AV H
Sbjct: 109 ---RHDVDLDGARAVLIGAGGAARAIAFVLADEGATIQIANRTKERAEELATAVPQTTGH 165
Query: 417 -FEYLHEFFPEKGMILANASAIGMEPNSDQSPVPKEALKAYELVFDAVYTPRNTRLLREA 475
L + E +L NA+++GME +D SPVP E+L + V D VY P TRLLR+A
Sbjct: 166 GLPDLPDLL-ENADVLINATSVGME--TDTSPVPAESLHRHLTVMDVVYRPLETRLLRDA 222
Query: 476 AEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRK 512
+ GA V G M + Q + +TG AP + M +
Sbjct: 223 KQTGAETVDGGWMLLYQGVEALERWTGREAPVEAMNE 259
>gi|148655701|ref|YP_001275906.1| shikimate 5-dehydrogenase [Roseiflexus sp. RS-1]
gi|148567811|gb|ABQ89956.1| shikimate dehydrogenase [Roseiflexus sp. RS-1]
Length = 283
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 98/290 (33%), Positives = 137/290 (47%), Gaps = 45/290 (15%)
Query: 241 GLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLVDDVKEFFRTYSG-----------TDF 289
G++ +PV HS P LHN AF H Y E +RT S
Sbjct: 7 GVIGDPVDHSLSPFLHNAAFEHLGIVARY---------ERWRTSSAELPQRIASLRAPHI 57
Query: 290 AGFSVGIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDAL 349
G +V +PHK + D + P A+ IGAVNTI+R P DG+L G NTD + I+ L
Sbjct: 58 LGANVTLPHKIAVIPLLDRLDPQAEQIGAVNTIVRLP-DGQLEGCNTDAPATIAT----L 112
Query: 350 RERQGINGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGARVIIFNRNYERAKALADA 409
RE G + P +I +L +G A A ++ + + NR ERA+ L
Sbjct: 113 REDAGFD-------PTGKRIVLLGASGAARAAACALIAAQATALTVINRTLERAEELLAD 165
Query: 410 VSGEALHFEYLHEFFPE---------KGMILANASAIGMEPNSDQSPVPKEALKAYELVF 460
V + YL P+ ++ NA+++G ++D++P+P + A LVF
Sbjct: 166 VLANSDADPYLRALTPDDPDVPEAIASADLIINATSLGW--HADETPLPGHLIPATALVF 223
Query: 461 DAVYTPRNTRLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFM 510
D VY P TRLLREAA+ GA + G M +RQA F +TG AP D M
Sbjct: 224 DMVYRP--TRLLREAAQAGAATLDGRGMLVRQAALSFERWTGVSAPLDVM 271
>gi|88602321|ref|YP_502499.1| shikimate 5-dehydrogenase [Methanospirillum hungatei JF-1]
gi|88187783|gb|ABD40780.1| shikimate dehydrogenase [Methanospirillum hungatei JF-1]
Length = 454
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 104/289 (35%), Positives = 142/289 (49%), Gaps = 27/289 (9%)
Query: 229 QLEHINPDTKIF--GLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLVDDVKEFFRTYSG 286
L+ I+ D IF G++ P HSK P ++N F Y D F G
Sbjct: 189 HLKKISGDYDIFLYGILGYPCMHSKSPGIYNHLFADYGMPAHYTWFEHKDPGRFLSLLPG 248
Query: 287 TDFAGFSVGIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIE 346
T G SV IPHKE + DE+ A+SIGAVNTI+ + D K G+NTD + +E
Sbjct: 249 TGVRGLSVTIPHKETVIPYLDEIKHDAESIGAVNTILIQ--DDKKYGFNTDWKGIYRPLE 306
Query: 347 DALRERQGINGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGARVIIFNRNYERAKAL 406
+H G V++GAGGA A + RG +I NR ERA+ L
Sbjct: 307 ------------GTH-----GDTAVILGAGGAAAAAVYAVSMRGFTPVILNRTPERAEHL 349
Query: 407 ADAVSGEALHFEYLHEFFPEKGMILANASAIGMEPNSD-QSPVPKEALKAYELVFDAVYT 465
A E + ++ P+ +L NA+ IGM SD +P+P AL+ VFD VYT
Sbjct: 350 ARKSGAEIGTLADIGKYHPD---LLINATPIGM--GSDPHTPIPPSALEPGMKVFDLVYT 404
Query: 466 PRNTRLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRKLV 514
PR+T LL+ A G +V+ G EMFI Q QFR+ TG P +R+++
Sbjct: 405 PRDTPLLQAALASGCSVIPGTEMFIHQLAEQFRILTGIETPISRLREIL 453
>gi|15613887|ref|NP_242190.1| shikimate 5-dehydrogenase [Bacillus halodurans C-125]
gi|20137510|sp|Q9KD93.1|AROE_BACHD RecName: Full=Shikimate dehydrogenase
gi|10173940|dbj|BAB05043.1| shikimate 5-dehydrogenase [Bacillus halodurans C-125]
Length = 278
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 95/289 (32%), Positives = 146/289 (50%), Gaps = 23/289 (7%)
Query: 238 KIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLVD--DVKEFFRTYSGTDFAGFSVG 295
K+FGL+ +PVGHS P++HN F+ F+G Y V+ +++ GF+V
Sbjct: 3 KLFGLLGHPVGHSLSPLMHNQMFQLLDFDGYYHAFDVEPSQLEKAVEGARALQMQGFNVT 62
Query: 296 IPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALRERQGI 355
IPHK + D V A+ IGAVNT++ + DG+L G NTD + + ++ D +
Sbjct: 63 IPHKVTIMDYLDMVDEEAQEIGAVNTVVMK--DGQLFGSNTDGQGYLESLMDVV------ 114
Query: 356 NGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGARVI-IFNRNYERAKALADAV---- 410
T+P + +++GAGGA RA+ K R I I NR +A+ + +
Sbjct: 115 ------TTPFPTQDVLIIGAGGAARAIGTVLKREKVRSITIANRTLAKAEEFSGVLESSE 168
Query: 411 -SGEALHFEYLHEFFPEKGMILANASAIGMEPNSDQSPVPKEALKAYELVFDAVYTPRNT 469
S AL + + E+ ++ N +++GM P D P+ E L +V D +Y P T
Sbjct: 169 TSCSALSLKEAEQQL-ERFSVIINTTSVGMSPRVDDMPLSLERLSRETVVSDLIYNPLET 227
Query: 470 RLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRKLVLEQF 518
+ LREA + GA V G+ MF+ Q F L+TG + MR+ VLEQ
Sbjct: 228 KFLREAKQKGAKTVDGLGMFVNQGALAFELWTGLRPDREKMRRCVLEQL 276
>gi|428316838|ref|YP_007114720.1| shikimate dehydrogenase [Oscillatoria nigro-viridis PCC 7112]
gi|428240518|gb|AFZ06304.1| shikimate dehydrogenase [Oscillatoria nigro-viridis PCC 7112]
Length = 348
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 88/317 (27%), Positives = 148/317 (46%), Gaps = 37/317 (11%)
Query: 237 TKIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLVD--DVKEFFRTYSGTDFAGFSV 294
TK+ G++ +PV HS P +HN A H + +Y+P V D+K ++ GFS+
Sbjct: 31 TKLLGVIGHPVEHSLSPAMHNAAISHLGVDFVYLPFPVKPGDLKAALAGFAAIGVRGFSI 90
Query: 295 GIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIE-------- 346
IPHK+ + EV P+A+SIGAVNT+ D G NTD E ++ ++
Sbjct: 91 TIPHKQAILPLLSEVSPIARSIGAVNTVYM--TDRGWCGTNTDVEGFLAPLQTPPTPPYQ 148
Query: 347 ----DALRERQGINGVASHTSPIAG---------KIFVLVGAGGAGRALAFGAKSRG-AR 392
DA+ + N P +G K+ V++G GGA RA+ G G A
Sbjct: 149 GGAKDAISALERGNTAVESCPPPSGARGGSDWSQKVAVILGNGGAARAVVAGCAQLGCAE 208
Query: 393 VIIFNRNYERAKALADAVSGEALHFEYL--HEF-----FPEKGMILANASAIGMEPNSDQ 445
+ + RN + + + + L H + + +L N + +GM P ++
Sbjct: 209 IHVVGRNEQNLGEFQQSWVNSPMPVQNLQVHTWDNLSRLISQADLLVNTTPVGMYPQGEK 268
Query: 446 SPVPK---EALKAYELVFDAVYTPRNTRLLREAAEVGATVVSGVEMFIRQALGQFRLFTG 502
SPV + + A +V+D +YTP T+ L++A GA + G+EM ++Q +++
Sbjct: 269 SPVAAGEIDRIPAGAIVYDLIYTPNPTQFLKDAQLRGARAIDGLEMLVQQGAAALKIWLN 328
Query: 503 GLA-PEDFMRKLVLEQF 518
+ P D MR+ + +
Sbjct: 329 KESVPVDVMRQALRQHL 345
>gi|254826875|ref|ZP_05231562.1| shikimate 5-dehydrogenase [Listeria monocytogenes FSL N3-165]
gi|258599255|gb|EEW12580.1| shikimate 5-dehydrogenase [Listeria monocytogenes FSL N3-165]
Length = 289
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 91/299 (30%), Positives = 147/299 (49%), Gaps = 35/299 (11%)
Query: 233 INPDTKIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLV--DDVKEFFRTYSGTDFA 290
I+ T++ GL+ PV HSK PI++N +F+ + Y+ + V + + +
Sbjct: 5 ISGTTRLLGLIGTPVDHSKSPIMYNHSFQKAGLDYAYLAFDTPTEKVTDAIKAIKTFNLR 64
Query: 291 GFSVGIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALR 350
G +V +P K + D++ P A+ IGAVNTI+ DGKL G+ TD I+ + DA
Sbjct: 65 GANVTMPCKSEVLKYMDDLSPAARMIGAVNTIVNE--DGKLTGHITDGLGFIANLRDA-- 120
Query: 351 ERQGINGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGAR-VIIFNRN---YERAKAL 406
+ +AGK ++GAGGA A+ GA+ + IFN Y++AK
Sbjct: 121 -----------SVDVAGKKMTIIGAGGAATAIQVQCALDGAKEITIFNIKDAFYDKAKQT 169
Query: 407 ADAVSGEA----LHFEYLHEFFPEK-------GMILANASAIGMEPNSDQSPVPKEALKA 455
A ++ E +H L++ EK IL NA+ +GM PN ++P+ ++
Sbjct: 170 AASIKQEVPNCIVHIYDLND--TEKLNAEITTSDILVNATLVGMHPNEHETPISDTSVFR 227
Query: 456 YELVF-DAVYTPRNTRLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRKL 513
EL+ D +Y P+ T+LL +A G V G+ M + Q ++LFTG P ++ L
Sbjct: 228 KELIVADIIYNPKKTQLLLDAEAAGCKTVGGLGMLLWQGAEAYKLFTGEDMPVSEVKDL 286
>gi|116071826|ref|ZP_01469094.1| shikimate / quinate 5-dehydrogenase [Synechococcus sp. BL107]
gi|116065449|gb|EAU71207.1| shikimate / quinate 5-dehydrogenase [Synechococcus sp. BL107]
Length = 289
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 88/296 (29%), Positives = 135/296 (45%), Gaps = 32/296 (10%)
Query: 233 INPDTKIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPM--LVDDVKEFFRTYSGTDFA 290
IN DT + GL+ NPV HS P +HN A + + N Y+P+ ++KE G
Sbjct: 2 INGDTGLVGLLGNPVRHSLSPAMHNAALQALQLNWSYLPLPCTSQNLKEVLEGLRGVGCH 61
Query: 291 GFSVGIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPID-GKLVGYNTDCESAISAIEDAL 349
G +V IPHK+ C E+ PLAK +GAVNT+I P+D G G NTD E ++ + +
Sbjct: 62 GLNVTIPHKQDVAGLCQELSPLAKRLGAVNTLI--PLDSGGWHGTNTDVEGFLTPLGEP- 118
Query: 350 RERQGINGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRG-ARVIIFNRNYERAKALA- 407
Q G V++G GG+ RA+A + G A + + R +
Sbjct: 119 SSWQNCRG-------------VIIGCGGSARAIAAALQGLGLASITVIGRRRDALDEFIQ 165
Query: 408 -----DAVSGEALHFEYLHEFFPEKGMILANASAIGMEPNSDQSPVP-----KEALKAYE 457
DA LH + E+ ++ N + +GM + + P L+
Sbjct: 166 DLQHDDAPLTPCLHSNPMLASLIEQADLVVNTTPVGMAQHGEAQAFPLGEAIWSHLRGSA 225
Query: 458 LVFDAVYTPRNTRLLREAAEVGATVVSGVEMFIRQALGQFRLFTG-GLAPEDFMRK 512
+++D VYTPR T L G + G+EM ++Q RL++G P + MR+
Sbjct: 226 VLYDLVYTPRPTAWLSWGQSRGHRCIDGLEMLVQQGAASLRLWSGRNDVPVETMRR 281
>gi|397775825|ref|YP_006543371.1| shikimate 5-dehydrogenase [Natrinema sp. J7-2]
gi|397684918|gb|AFO59295.1| shikimate 5-dehydrogenase [Natrinema sp. J7-2]
Length = 269
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 112/280 (40%), Positives = 147/280 (52%), Gaps = 25/280 (8%)
Query: 238 KIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPML--VDDVKEFFRTYSGTDFAGFSVG 295
++GL+ NPVGHS P +H A+ Y DD+++ R AG +V
Sbjct: 4 DVYGLLGNPVGHSLSPPMHEAAYDELGLEARYATFEPEADDIEDAIRGADALGIAGLNVT 63
Query: 296 IPHKEPAVACCDEVHP--LAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALRERQ 353
IP K+ A + V P LA IGAVNTI G GYNTD AI A+ ALRE
Sbjct: 64 IPFKQ---AALEIVAPEDLATRIGAVNTIDFSG-SGPPTGYNTD---AIGALR-ALRE-- 113
Query: 354 GINGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGARVIIFNRNYERAKALADAVSGE 413
H + G+ V+VGAGGAGRA+AFG GA V I NR +A LA AV
Sbjct: 114 -------HDVALEGEQAVVVGAGGAGRAIAFGLADAGATVAIANRTESKAHDLAAAVPRA 166
Query: 414 ALH-FEYLHEFFPEKGMILANASAIGMEPNSDQSPVPKEALKAYELVFDAVYTPRNTRLL 472
H L E + +L NA+++GM ++D +PVP +AL V DAVY+P TRLL
Sbjct: 167 TGHGLAALEELLADAD-VLVNATSVGM--DADATPVPADALHGDLAVLDAVYSPLETRLL 223
Query: 473 REAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRK 512
++AA+ GAT V G M + Q + F ++TG AP D M +
Sbjct: 224 QDAADAGATTVDGAWMLLYQGVEAFEIWTGQDAPVDVMNE 263
>gi|193213291|ref|YP_001999244.1| shikimate 5-dehydrogenase [Chlorobaculum parvum NCIB 8327]
gi|193086768|gb|ACF12044.1| shikimate 5-dehydrogenase [Chlorobaculum parvum NCIB 8327]
Length = 296
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 106/306 (34%), Positives = 150/306 (49%), Gaps = 48/306 (15%)
Query: 238 KIFGLVSNPVGHSKGPILHNPAFR-------HTRFNGIYVPMLVDDVKEFFRTYSGTDFA 290
K+FGL+ V +S P++HN AF+ +T FN I P LV + R A
Sbjct: 8 KVFGLIGRNVDYSWSPLIHNTAFQALGLPSIYTIFN-IAAPELVGNALTGARALG---IA 63
Query: 291 GFSVGIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALR 350
GF+V IP+K+ V DE+ P A++IGAVNTI+ +G+L G+NTD
Sbjct: 64 GFNVTIPYKKTVVPFLDELSPEAQAIGAVNTIVND--NGRLTGHNTD------------- 108
Query: 351 ERQGINGVASHTSPIA----GKIFVLVGAGGAGRAL--AFGAKSRGARVIIFNRNYERAK 404
I G A+ P+A GK + G GGA A AF + V + RN E+A+
Sbjct: 109 ----IAGFAAPLLPMAEQIHGKPVCIFGNGGAALAAVEAFRLHFHPSSVRLMVRNLEKAE 164
Query: 405 ALADAVSGEALHFEYLH--------EFFPEKGMILANASAIGMEPNSD--QSPVP--KEA 452
A+ + + L L E + ++ NA+ IG SD QS VP ++
Sbjct: 165 AMLEGYAHRELVEPCLTAELDTPDGERLLGECCVIVNATPIGTAGRSDAIQSVVPARRKL 224
Query: 453 LKAYELVFDAVYTPRNTRLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRK 512
L ++V+D VY P T LL EA GA +SG+EM I QA F ++TG P D +RK
Sbjct: 225 LHEGQIVYDMVYNPLETPLLAEARAAGAETISGIEMLIGQAARSFSIWTGQEMPVDTVRK 284
Query: 513 LVLEQF 518
VL++
Sbjct: 285 TVLDEI 290
>gi|194016640|ref|ZP_03055254.1| shikimate dehydrogenase [Bacillus pumilus ATCC 7061]
gi|194012113|gb|EDW21681.1| shikimate dehydrogenase [Bacillus pumilus ATCC 7061]
Length = 300
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 92/306 (30%), Positives = 147/306 (48%), Gaps = 36/306 (11%)
Query: 232 HINPDTKIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLV--DDVKEFFRTYSGTDF 289
+I+ TK+ GL++ P+GHS P +HN + T N Y+ V D+++
Sbjct: 8 NIDGKTKLVGLLATPIGHSLSPRMHNLGYTLTGINYAYLAFEVGNDELEAAVYGMKAMGA 67
Query: 290 AGFSVGIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDAL 349
AGF+V +P+K + DE+ A+ A NT++ + DGKL+GYNTD +
Sbjct: 68 AGFNVSMPNKMKVLDYLDELDDSARYTRASNTVVNK--DGKLIGYNTDGLGYVR------ 119
Query: 350 RERQGINGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGARVI-IFNRN---YERAKA 405
+ H +AG+ LVG+GGA +A G R I IF RN + +A+
Sbjct: 120 -------NLIEHGVELAGQKVTLVGSGGAATPIAIQLAQSGIREISIFARNDQYFVQAEE 172
Query: 406 LADAVSGEALHFEYLHEFFP-----------EKGMILANASAIGMEPNSDQSPVPKEALK 454
++ E F FP + ILAN +++GM+P DQ + + L
Sbjct: 173 NVTYINEEMKSFGVKANIFPLEDKDAFRREVAESAILANGTSLGMKP-LDQLSIIDDTLD 231
Query: 455 AYE---LVFDAVYTPRNTRLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMR 511
+V D VY P+ T+LL +A E GA ++G+ M + Q ++LFTG P D ++
Sbjct: 232 VLREDLIVTDVVYNPQKTKLLAQAQEAGAKTINGLGMMLWQGALAYKLFTGEDMPVDQVK 291
Query: 512 KLVLEQ 517
+++ E
Sbjct: 292 QILFEN 297
>gi|325297310|ref|YP_004257227.1| shikimate dehydrogenase [Bacteroides salanitronis DSM 18170]
gi|324316863|gb|ADY34754.1| Shikimate dehydrogenase substrate binding domain protein
[Bacteroides salanitronis DSM 18170]
Length = 247
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 76/268 (28%), Positives = 130/268 (48%), Gaps = 27/268 (10%)
Query: 238 KIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLVDDVKEFFRTYS-GTDFAGFSVGI 296
K FGL+ P+GHS N F + Y+ + +++F + + D G +V I
Sbjct: 2 KKFGLIGYPLGHSFSKNFFNEKFASENIDAQYINFEIPTIEDFPKVVTMNPDLCGLNVTI 61
Query: 297 PHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKL--VGYNTDCESAISAIEDALRERQG 354
P+KE ++ D V P+A IGAVN I + GKL GYN+D +IE L
Sbjct: 62 PYKEKVISFLDRVDPVAAKIGAVNVIKFEQVKGKLKLAGYNSDVIGFTRSIESLLESYH- 120
Query: 355 INGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGARVIIFNRNYERAKALADAVSGEA 414
K +++G GG+ +A+ +G K G + +RN + ++ +
Sbjct: 121 -------------KKALILGTGGSSKAINYGLKELGLETLFVSRNQHNEQT----ITYDE 163
Query: 415 LHFEYLHEFFPEKGMILANASAIGMEPNSDQSP-VPKEALKAYELVFDAVYTPRNTRLLR 473
L E + E+ ++ N + +GM P +DQ P +P E L + L++D +Y P T ++
Sbjct: 164 LTPEIMDEY-----KVIVNCTPVGMYPQADQCPNIPYECLTSKHLLYDLLYNPDTTLFMK 218
Query: 474 EAAEVGATVVSGVEMFIRQALGQFRLFT 501
+ ++ GA V +G+EM + QA G + ++
Sbjct: 219 KGSDRGAAVKNGLEMLLLQAFGSWEIWN 246
>gi|290893185|ref|ZP_06556173.1| shikimate 5-dehydrogenase [Listeria monocytogenes FSL J2-071]
gi|404408677|ref|YP_006691392.1| shikimate 5-dehydrogenase [Listeria monocytogenes SLCC2376]
gi|290557347|gb|EFD90873.1| shikimate 5-dehydrogenase [Listeria monocytogenes FSL J2-071]
gi|404242826|emb|CBY64226.1| putative shikimate 5-dehydrogenase [Listeria monocytogenes
SLCC2376]
Length = 289
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 91/301 (30%), Positives = 146/301 (48%), Gaps = 35/301 (11%)
Query: 231 EHINPDTKIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPML--VDDVKEFFRTYSGTD 288
I+ T++ GL+ P+ HSK PI++N +F+ + Y+ + V + + +
Sbjct: 3 NRISGTTRLLGLIGTPIDHSKSPIMYNYSFQKAGLDYAYLAFDTPIQKVADTIKAIKTFN 62
Query: 289 FAGFSVGIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDA 348
G +V +P K + D++ P A+ IGAVNTI+ DGKL G+ TD I+ + DA
Sbjct: 63 LRGANVTMPCKSEVLKHMDDLSPAARMIGAVNTIVNE--DGKLTGHITDGLGFIANLRDA 120
Query: 349 LRERQGINGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGAR-VIIFNRN---YERAK 404
+ +AGK ++GAGGA A+ GA+ + IFN Y++AK
Sbjct: 121 -------------SVDVAGKKMTIIGAGGAATAIQVQCALDGAKEITIFNIKDAFYDKAK 167
Query: 405 ALADAVSGEA----LHFEYLHEFFPEK-------GMILANASAIGMEPNSDQSPVPKEAL 453
++ E +H L++ EK IL NA+ +GM PN ++P+ ++
Sbjct: 168 QTVASIKQEVPNCIVHIYDLND--TEKLNAEIATSDILVNATLVGMHPNEHETPISNTSV 225
Query: 454 KAYEL-VFDAVYTPRNTRLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRK 512
EL V D +Y P+ T+LL +A G V G+ M + Q ++LFTG P +R
Sbjct: 226 FRKELIVTDIIYNPKKTQLLLDAEAAGCKTVGGLGMLLWQGAEAYKLFTGKDMPVSEVRD 285
Query: 513 L 513
L
Sbjct: 286 L 286
>gi|448639954|ref|ZP_21677102.1| shikimate 5-dehydrogenase [Haloarcula sinaiiensis ATCC 33800]
gi|445762481|gb|EMA13702.1| shikimate 5-dehydrogenase [Haloarcula sinaiiensis ATCC 33800]
Length = 265
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 105/285 (36%), Positives = 139/285 (48%), Gaps = 25/285 (8%)
Query: 238 KIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPM--LVDDVKEFFRTYSGTDFAGFSVG 295
++GL+ NPVGHS P +H + + YV D + G +V
Sbjct: 2 DVYGLIGNPVGHSLSPPMHEAGYEALGLDARYVTFEPAADSGADAIDAAKTLGIDGLNVT 61
Query: 296 IPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKL-VGYNTDCESAISAIEDALRERQG 354
IP K+ + D PLA+ IGAVNT+ DG GYNTD A+ A+E
Sbjct: 62 IPFKQDVLDAVDPA-PLAERIGAVNTV---DFDGGTPTGYNTDAVGAVRALE-------- 109
Query: 355 INGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGARVIIFNRNYERAKALADAVSGEA 414
H S V+VGAGGAGRA+AFG G V + NR +A ALAD V +
Sbjct: 110 ------HHSVSLSGTAVVVGAGGAGRAVAFGLADEGLSVKVANRTESKADALADEVPDAS 163
Query: 415 LH-FEYLHEFFPEKGMILANASAIGMEPNSDQSPVPKEALKAYELVFDAVYTPRNTRLLR 473
H + L + + IL N +++GME D++PVP +AL V DAVYTP TRLL+
Sbjct: 164 GHGLDSLSDLLADAD-ILVNCTSVGME--EDETPVPADALHGDLAVLDAVYTPIETRLLQ 220
Query: 474 EAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRKLVLEQF 518
+AA GAT V G M + Q + F +TG AP D M + E
Sbjct: 221 DAAAAGATTVDGAWMLLYQGVEAFERWTGEDAPVDQMNGQLREHL 265
>gi|418120030|ref|ZP_12756981.1| 3-dehydroquinate dehydratase, type I [Streptococcus pneumoniae
GA18523]
gi|418198134|ref|ZP_12834594.1| 3-dehydroquinate dehydratase, type I [Streptococcus pneumoniae
GA47778]
gi|353789143|gb|EHD69539.1| 3-dehydroquinate dehydratase, type I [Streptococcus pneumoniae
GA18523]
gi|353862772|gb|EHE42702.1| 3-dehydroquinate dehydratase, type I [Streptococcus pneumoniae
GA47778]
Length = 506
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 112/390 (28%), Positives = 185/390 (47%), Gaps = 44/390 (11%)
Query: 145 IACMQATGADVMKLEIAVDSITDLAPVFEMLTHCQVPLIALAVGSRGLISQLLGPKFGGF 204
+A M T DV+ L L P E +T +++G G +S++ G
Sbjct: 144 VAVMAHTEQDVLDLMNYTRGFKTLNPEQEYVT--------ISMGKVGKVSRITADVTGSS 195
Query: 205 LVYGSLGGKSVPGLPTLVSLKQVYQLE-HINPDTKIFGLVSNPVGHSKGPILHNPAFRHT 263
+ SL S PG +L S+K+ + ++ T++ +V+NP+ HS P +HN AF T
Sbjct: 196 WSFASLDEVSAPGQISLASMKKSGRFWMKLDGYTRLAAVVANPIKHSISPFIHNRAFEAT 255
Query: 264 RFNGIYVPMLVD--DVKEFFRTYSGTDFAGFSVGIPHKEPAVACCDEVHPLAKSIGAVNT 321
NG YV ++ D+ E G ++ +P+KE + D++ A+ IGAVNT
Sbjct: 256 ATNGAYVAWEIEASDLAETVANIRRYQMFGINLSMPYKEQVIPYLDKLSDEARLIGAVNT 315
Query: 322 IIRRPIDGKLVGYNTDCESAISAIEDALRERQGINGVASHTSPIAGKIFVLVGAGGAGRA 381
++ +G L+GYNTD + + S T I+GK L+GAGGA ++
Sbjct: 316 VVNE--NGNLIGYNTDGKGFFKCL-------------PSFT--ISGKKMTLLGAGGAAKS 358
Query: 382 LAFGAKSRG-ARVIIFNR--NYERAKALADAVSGEALHFE---YLHEFFPE------KGM 429
+ A G +++ +F R + E+ + D + E F+ Y E E +
Sbjct: 359 ILAQAILDGVSQISVFVRSVSMEKTRPYLDKLQ-EQTGFKVDLYALENVSELQARIVESD 417
Query: 430 ILANASAIGMEPNSDQSPVPKE-ALKAYELVFDAVYTPRNTRLLREAAEVGATVVSGVEM 488
+L NA+++GM+ S SPVP+ L LV D +Y P T L+ A G V+G+ M
Sbjct: 418 LLVNATSVGMDGQS--SPVPESINLPETILVADIIYQPFETPFLKWARSQGKPAVNGLGM 475
Query: 489 FIRQALGQFRLFTGGLAPEDFMRKLVLEQF 518
+ QA F+L+TG P + + + + E++
Sbjct: 476 LLYQAAEAFQLWTGKEMPTEEIWQSLTEKY 505
>gi|449128721|ref|ZP_21764967.1| shikimate 5-dehydrogenase [Treponema denticola SP33]
gi|448941129|gb|EMB22033.1| shikimate 5-dehydrogenase [Treponema denticola SP33]
Length = 493
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 131/518 (25%), Positives = 217/518 (41%), Gaps = 53/518 (10%)
Query: 8 SLLVCTQLECETTEEMQASIEQAKVEGADLVELCIDSMEFSHISEVDKLIQHPTLPAIVS 67
S VC L +T E+ +++E+ K + D+ EL +D + S I + + +P I++
Sbjct: 2 STKVCLVLTEKTIEKNLSALEKYK-KFIDIAELRVDYLNQSEILYLRNFPERAGIPCILT 60
Query: 68 YRLKSS--RKSSDEACKNTCLQVLRRAL-----DLDVEFVEMDYEVASDPLMSEIIYSRS 120
R KS + E + T + R L D F +D E D E
Sbjct: 61 VRRKSDGGNFTGGEGARMT---IFARGLAFASSDPIKNFAYIDLESDFDSSGIEEAAMAF 117
Query: 121 NTKIIVSSYLNGGGKPTTEKLGDVIACMQATGADVMKLEIAVDSITDLAPVFEMLTHCQV 180
+ KII S + K + + I + D+ KL + + D++ +F+ Q
Sbjct: 118 DIKIIRSLH----SKVPVKNIVKTIEGLSRFETDIPKLAFTANCLNDISELFKASKLIQN 173
Query: 181 PLIALAV-GSRGLISQLLGPKFGGFLVYGSL-----GGKSVPGLPTLVSLKQVYQLEHIN 234
L+V G GL S++L + +VY K L +L+++Y I+
Sbjct: 174 QEYILSVMGPYGLSSRILSKQLNSQIVYTFTPEYIKKNKLEQELIDPETLEELYGFSKID 233
Query: 235 PDTKIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLVDDVKEFFRTYSGTDFAGFSV 294
DT+++G++ V S P +HN F N +Y+P+ KE + + G SV
Sbjct: 234 NDTRLYGVIGKDVNTSLSPQIHNKGFEQKNLNSVYIPISAVSSKEALDFANFLNIKGLSV 293
Query: 295 GIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAI-----EDAL 349
P K + + + +K IGAVNT+I + K GYNTD + A+ E L
Sbjct: 294 TAPFKSEIIPQINSISEASKFIGAVNTLINE--NKKWFGYNTDVDGFQQALIEFLNEKDL 351
Query: 350 RERQGINGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGARVIIFNRNYERAKALADA 409
R+ + A + ++ S + IFNR E+AK +A+
Sbjct: 352 RKYKVAIIGAGGAARAVAEVI----------------SSLHGKACIFNRTAEKAKNIAEK 395
Query: 410 VSGEA-----LHFEYLHEFFPEKGMILANASAIGMEPNSDQSPVPKEALKAYELVFDAVY 464
+ ++ + LH F +I+ +A GMEP+ D P+ E VF+ +Y
Sbjct: 396 YKFKWALLDPINIKQLHAF---SELIIQTTNA-GMEPDIDMDPLNFYTFTGKEKVFELIY 451
Query: 465 TPRNTRLLREAAEVGATVVSGVEMFIRQALGQFRLFTG 502
P T++L+ A G V +G +M QA QF+ F G
Sbjct: 452 RPETTKMLQRARTAGCQVCNGYKMLEYQAYHQFKAFAG 489
>gi|78185871|ref|YP_378305.1| shikimate 5-dehydrogenase [Synechococcus sp. CC9902]
gi|78170165|gb|ABB27262.1| shikimate dehydrogenase [Synechococcus sp. CC9902]
Length = 289
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 92/296 (31%), Positives = 142/296 (47%), Gaps = 32/296 (10%)
Query: 233 INPDTKIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYV--PMLVDDVKEFFRTYSGTDFA 290
IN DT + GL+ NPV HS P +HN A + + N Y+ P +++KE + +
Sbjct: 2 INGDTGLVGLLGNPVRHSLSPAMHNAALQALQLNWSYLALPCASENLKEVLQGLRAVNCR 61
Query: 291 GFSVGIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPID-GKLVGYNTDCESAISAIEDAL 349
G +V IPHK+ C E+ PLAK +GAVNT+I P+D G G NTD E ++ +
Sbjct: 62 GLNVTIPHKQDVAELCQELSPLAKRLGAVNTLI--PLDSGGWHGTNTDVEGFLTPL---- 115
Query: 350 RERQGINGVASHTSPIAGKIFVLVGAGGAGRALAFGAKS-RGARVIIFNRNYERAKA-LA 407
G S G I +G GG+ RA+A G +S R + + + R E A +A
Sbjct: 116 -------GEQSSWQNCHGAI---IGCGGSARAIAAGLQSLRLSSITVIGRRQEALDAFIA 165
Query: 408 DAVSGEALHFEYLHE-----FFPEKGMILANASAIGMEPNSDQSPVP-KEALKAY----E 457
D +A L ++ ++ N + +GM + D P EA+ ++
Sbjct: 166 DLQRKDAPLTACLQSSPDLASLMKRADLVVNTTPVGMAQHGDAQAFPLGEAIWSHLQESA 225
Query: 458 LVFDAVYTPRNTRLLREAAEVGATVVSGVEMFIRQALGQFRLFTG-GLAPEDFMRK 512
+++D VYTPR T LR G + G+EM ++Q RL++ P + MR+
Sbjct: 226 MLYDLVYTPRPTAWLRWGQSRGHRCIDGLEMLVQQGAASLRLWSDRNDVPVETMRR 281
>gi|402782448|ref|YP_006637994.1| Shikimate/quinate 5-dehydrogenase I beta [Klebsiella pneumoniae
subsp. pneumoniae 1084]
gi|402543306|gb|AFQ67455.1| Shikimate/quinate 5-dehydrogenase I beta [Klebsiella pneumoniae
subsp. pneumoniae 1084]
Length = 287
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 92/303 (30%), Positives = 149/303 (49%), Gaps = 36/303 (11%)
Query: 231 EHINPDTKIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLV--DDVKEFFRTYSGTD 288
E I T++ GL++ P+ HS P +HN AF + + +Y+ V ++K+ + +
Sbjct: 3 ERITGHTELIGLIATPIRHSMSPTMHNEAFAYLGLDYVYLAFEVGNQELKDVVQGFRAMK 62
Query: 289 FAGFSVGIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDA 348
GF+V +P+K D++ P A+ +GAVNT++ DG L G+ TD + A+ +A
Sbjct: 63 LRGFNVSMPNKTEICQYLDKLSPAAQLVGAVNTVVND--DGVLTGHITDGTGYMRALSEA 120
Query: 349 LRERQGINGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGARVI-IFNRNYERAKALA 407
GI+ I GK ++GAGGA AL A G + I IFNR R K A
Sbjct: 121 -----GID--------IIGKKMTVLGAGGAATALCVQAALDGVKAISIFNR---RDKFFA 164
Query: 408 DAVSGEA---------LHFEYLHEFFP-----EKGMILANASAIGMEPNSDQSPVPKEA- 452
+A A +H L + + +IL NA+ +GM+P Q +P ++
Sbjct: 165 NAEETVAKIRHNTDCEIHLFDLDDHDKLRAEIDSSVILTNATGVGMKPFEGQMLLPDDSF 224
Query: 453 LKAYELVFDAVYTPRNTRLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRK 512
L+ +V D VY PR T LL A + G ++G+ M + Q F ++TG P D+++
Sbjct: 225 LRPDLIVSDVVYNPRKTHLLEVAEKKGCRTLNGLGMMLWQGARAFEIWTGKQMPVDYIKS 284
Query: 513 LVL 515
++
Sbjct: 285 ILF 287
>gi|406026143|ref|YP_006724975.1| shikimate 5-dehydrogenase [Lactobacillus buchneri CD034]
gi|405124632|gb|AFR99392.1| Shikimate 5-dehydrogenase [Lactobacillus buchneri CD034]
Length = 290
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 93/291 (31%), Positives = 147/291 (50%), Gaps = 37/291 (12%)
Query: 233 INPDTKIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLVDD--VKEFFRTYSGTDFA 290
I+ TK+FGL+++P HS P++HN +F+ T NGIY+ V + +
Sbjct: 2 IDGHTKLFGLLAHPAAHSLSPLIHNTSFQVTGINGIYLAFDVTSAGLADSLAAMRAMHIG 61
Query: 291 GFSVGIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALR 350
GF++ +P K + DE+ P A+ + AVNT+I R DG+L+G +TD + + DAL+
Sbjct: 62 GFNLSMPLKTDVLPLLDEITPRAERLSAVNTVINR--DGRLIGDSTDGQGWV----DALK 115
Query: 351 ERQGINGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGARVI--------IFNRNYER 402
+ I K+ ++GAGGAGRA+ A GA+ + +F+ E+
Sbjct: 116 QDD---------ITIDEKVVTVLGAGGAGRAIISAAVDAGAKQVYVFKRTNDLFDARKEQ 166
Query: 403 AKALADAVSGEALHFE---YLHEFFPEKGMILANASAIGMEPNSDQS-PVPKEA---LKA 455
+ +D V+ L +E + E F E I+ANA+ +GM DQS PV + L
Sbjct: 167 LEGWSDVVT--VLPYEDEGLIAEAFDES-QIIANATNVGMA--GDQSLPVSQSVMNHLTP 221
Query: 456 YELVFDAVYTPRNTRLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAP 506
+V DA+Y P T + A + G+ +G+ M + QA G F +TG P
Sbjct: 222 RHIVSDAIYFPLETPFIHAAKQRGSRTYNGIGMLVNQAAGSFLEWTGQRMP 272
>gi|331092180|ref|ZP_08341010.1| shikimate 5-dehydrogenase [Lachnospiraceae bacterium 2_1_46FAA]
gi|330401952|gb|EGG81526.1| shikimate 5-dehydrogenase [Lachnospiraceae bacterium 2_1_46FAA]
Length = 291
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 89/290 (30%), Positives = 142/290 (48%), Gaps = 30/290 (10%)
Query: 232 HINPDTKIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLVD--DVKEFFRTYSGTDF 289
I+ T + GL+ +PV HS P++HN +FR N IY+ VD ++ +
Sbjct: 4 QIDGHTILTGLLGSPVSHSISPLMHNESFRQLGLNYIYLAFDVDVNRLETAVEGLRALNV 63
Query: 290 AGFSVGIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDAL 349
GF++ +P+K CD++ P AK GAVNT++ DG L GY TD + ++++A
Sbjct: 64 RGFNLTMPNKNEMCRLCDKLSPAAKISGAVNTVVND--DGVLTGYTTDGIGYMQSLKEAG 121
Query: 350 RERQGINGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGARVI-IFNRN----YERAK 404
+ I GK ++GAGGA A+ A G R I +FN + K
Sbjct: 122 HD-------------IIGKKMTMLGAGGASTAILVQAALDGVREISVFNNRSASFHRMEK 168
Query: 405 ALAD--AVSGEALH-FEYLHEFFPEK----GMILANASAIGMEPNSDQSPVPKEALKAYE 457
+ D VS +H ++Y E + ++L N +++GM P++D S + +
Sbjct: 169 VIEDLKNVSDCEMHLYDYSDEHILRREISESVLLTNGTSVGMSPHTDASIITDADMFHKN 228
Query: 458 LVF-DAVYTPRNTRLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAP 506
L+ D +Y PR T+LLR A E G ++G+ M + Q F+L+TG P
Sbjct: 229 LIVSDVIYNPRETKLLRMARESGCPTLNGLYMLLFQGAEAFKLWTGKEMP 278
>gi|386044549|ref|YP_005963354.1| shikimate 5-dehydrogenase [Listeria monocytogenes 10403S]
gi|404411543|ref|YP_006697131.1| shikimate 5-dehydrogenase [Listeria monocytogenes SLCC5850]
gi|345537783|gb|AEO07223.1| shikimate 5-dehydrogenase [Listeria monocytogenes 10403S]
gi|404231369|emb|CBY52773.1| putative shikimate 5-dehydrogenase [Listeria monocytogenes
SLCC5850]
Length = 289
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 90/301 (29%), Positives = 146/301 (48%), Gaps = 35/301 (11%)
Query: 231 EHINPDTKIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLV--DDVKEFFRTYSGTD 288
I+ T++ GL+ P+ HSK PI++N +F+ + Y+ + V + + +
Sbjct: 3 NRISGTTRLLGLIGTPIDHSKSPIMYNYSFQKAGLDYAYLAFDTPTEKVTDAIKAIKTFN 62
Query: 289 FAGFSVGIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDA 348
G +V +P K + D++ P A+ IGAVNTI+ DGKL G+ TD I+ + DA
Sbjct: 63 LRGANVTMPCKSEVLKYMDDLSPAARMIGAVNTIVNE--DGKLTGHITDGLGFIANLRDA 120
Query: 349 LRERQGINGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGAR-VIIFNRN---YERAK 404
+ + GK ++GAGGA A+ GA+ + IFN Y++AK
Sbjct: 121 -------------SVDVTGKKMTIIGAGGAATAIQVQCALDGAKEITIFNIKDAFYDKAK 167
Query: 405 ALADAVSGEA----LHFEYLHEFFPEK-------GMILANASAIGMEPNSDQSPVPKEAL 453
A ++ E +H L++ EK IL NA+ +GM PN ++P+ ++
Sbjct: 168 QTAASIKQEVPNCIVHIYDLND--TEKLNAEITTSDILVNATLVGMHPNEHETPISDTSV 225
Query: 454 KAYELVF-DAVYTPRNTRLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRK 512
EL+ D +Y P+ T+LL +A G V G+ M + Q ++LFTG P +R
Sbjct: 226 FRKELIVADIIYNPKKTQLLLDAEAAGCKTVGGLGMLLWQGAEAYKLFTGKDMPVSEVRD 285
Query: 513 L 513
L
Sbjct: 286 L 286
>gi|448327621|ref|ZP_21516944.1| shikimate 5-dehydrogenase [Natrinema versiforme JCM 10478]
gi|445617587|gb|ELY71182.1| shikimate 5-dehydrogenase [Natrinema versiforme JCM 10478]
Length = 267
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 108/277 (38%), Positives = 134/277 (48%), Gaps = 19/277 (6%)
Query: 238 KIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLVD--DVKEFFRTYSGTDFAGFSVG 295
++GL+ NPVGHS P +H A+ YV D D+ + AG +V
Sbjct: 2 DVYGLLGNPVGHSLSPPMHEAAYDELGLEARYVTFEPDEDDIDDAVHGADALGVAGLNVT 61
Query: 296 IPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALRERQGI 355
IP K+ A+ LA IGAVNTI G GYNTD A+ A+ D
Sbjct: 62 IPFKQDALEIV-APEDLATRIGAVNTIDFSG-SGPPTGYNTDAVGALRALRD-------- 111
Query: 356 NGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGARVIIFNRNYERAKALADAVSGEAL 415
H I V+VGAGGAGRA+AFG GA V I NR + A LAD V
Sbjct: 112 -----HDVDIEDARAVVVGAGGAGRAVAFGLADAGATVAIANRTEQTAHELADEVPRATG 166
Query: 416 HFEYLHEFFPEKGMILANASAIGMEPNSDQSPVPKEALKAYELVFDAVYTPRNTRLLREA 475
H E IL NA+++GME D +PVP +AL V DAVY P TRLL +A
Sbjct: 167 HGLAALEELVGDADILINATSVGME--EDATPVPADALHEELAVLDAVYRPLETRLLADA 224
Query: 476 AEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRK 512
AEVGAT V G M + Q + F ++TG AP M +
Sbjct: 225 AEVGATTVDGAWMLLYQGVEAFEIWTGRDAPVAVMNE 261
>gi|118591448|ref|ZP_01548846.1| shikimate 5-dehydrogenase [Stappia aggregata IAM 12614]
gi|118436120|gb|EAV42763.1| shikimate 5-dehydrogenase [Stappia aggregata IAM 12614]
Length = 282
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 101/296 (34%), Positives = 150/296 (50%), Gaps = 38/296 (12%)
Query: 238 KIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLV--DDVKEFFRTYSGTDFAGFSVG 295
K + +PV HS+ P++H + G Y + V + ++F+R ++ + +G +V
Sbjct: 6 KKAAITGHPVTHSRSPLVHGYWLKKHGIEGEYGRIDVPPETAEDFYRNFAASGLSGANVT 65
Query: 296 IPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALRERQGI 355
+P+KE A A C + AKS+GA NTI +G+L G NTD G
Sbjct: 66 VPNKEVAAAACGWLDDAAKSMGAANTIWLDE-NGRLCGANTDG--------------LGF 110
Query: 356 NGVASHTSP---IAGKIFVLVGAGGAGRALAFGAKSRG-ARVIIFNRNYERAKALADAV- 410
G +P ++ + V++GAGGA RA+ + SR V I NR +E+AKA+AD
Sbjct: 111 LGNLDQLAPGWDVSRESAVVLGAGGAARAVVWALLSRKFTTVHIVNRTFEKAKAIADKFG 170
Query: 411 SGEALH-FEYLHEFFPEKGMILANASAIGMEPNS----DQSPVPKEALKAYELVFDAVYT 465
SG H ++ L E+ +L N +++GM + D +P+PK A LV DAVY
Sbjct: 171 SGTIAHEWDKLGTVL-EQAELLVNTTSLGMTGKAPLEIDLAPLPKSA-----LVTDAVYA 224
Query: 466 PRNTRLLREAAEVGATVVSGVEMFIRQALGQF-RLFTGGLAPE--DFMRKLVLEQF 518
P T LLR A E G V G+ M + QA+ F R F G+ PE D +R L+LE
Sbjct: 225 PLETDLLRRARERGNQTVDGLGMLLHQAVPAFERWF--GVHPEVDDTLRSLILEDL 278
>gi|47093352|ref|ZP_00231120.1| shikimate 5-dehydrogenase, putative [Listeria monocytogenes str. 4b
H7858]
gi|417315877|ref|ZP_12102547.1| shikimate 5-dehydrogenase [Listeria monocytogenes J1816]
gi|47018271|gb|EAL09036.1| shikimate 5-dehydrogenase, putative [Listeria monocytogenes str. 4b
H7858]
gi|328465818|gb|EGF37006.1| shikimate 5-dehydrogenase [Listeria monocytogenes J1816]
Length = 289
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 90/301 (29%), Positives = 147/301 (48%), Gaps = 35/301 (11%)
Query: 231 EHINPDTKIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPML--VDDVKEFFRTYSGTD 288
I+ T++ GL+ PV HSK PI++N +F+ + Y+ ++ V + + +
Sbjct: 3 NRISGTTRLLGLIGTPVDHSKSPIMYNYSFQKAGLDYAYLAFDTPIEKVADTIKAIKTFN 62
Query: 289 FAGFSVGIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDA 348
G +V +P K + D++ P A+ IGAVNTI+ DGKL G+ TD I+ + DA
Sbjct: 63 LRGANVTMPCKSEVLKHMDDLSPAARMIGAVNTIVNE--DGKLTGHITDGLGFIANLRDA 120
Query: 349 LRERQGINGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGAR-VIIFNRN---YERAK 404
+ + GK ++GAGGA A+ GA+ + IFN Y++AK
Sbjct: 121 -------------SVDVTGKKMTIIGAGGAATAIQVQCALDGAKEITIFNIKDAFYDKAK 167
Query: 405 ALADAVSGEA----LHFEYLHEFFPEK-------GMILANASAIGMEPNSDQSPVPKEAL 453
A ++ E +H L++ EK IL NA+ +GM PN ++P+ ++
Sbjct: 168 QTAASIKQEVPNCIVHIYDLND--TEKLTAEIATSDILVNATLVGMHPNEHETPISDTSV 225
Query: 454 KAYELVF-DAVYTPRNTRLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRK 512
EL+ D +Y P+ T+LL +A G V G+ M + Q ++LFTG P ++
Sbjct: 226 FRKELIVADIIYNPKKTQLLLDAEAAGCKTVGGLGMLLWQGAEAYKLFTGKDMPVSEVKN 285
Query: 513 L 513
L
Sbjct: 286 L 286
>gi|423068252|ref|ZP_17057040.1| shikimate dehydrogenase [Streptococcus intermedius F0395]
gi|355367143|gb|EHG14856.1| shikimate dehydrogenase [Streptococcus intermedius F0395]
Length = 284
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 91/290 (31%), Positives = 144/290 (49%), Gaps = 35/290 (12%)
Query: 232 HINPDTKIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLV--DDVKEFFRTYSGTDF 289
I+ T++ +V+NP+ HS P +HN AF NG+YV + DD+K +
Sbjct: 2 KIDGYTRLAAVVANPIKHSISPFIHNAAFEQAGVNGVYVAWEISEDDLKTTVENIRRYNM 61
Query: 290 AGFSVGIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDAL 349
G ++ +P+K+ + DE+ P A+ IGAVNT++ + +GKL+GYNTD + ++ +
Sbjct: 62 FGINLSMPYKQAVIPFLDELTPAAQMIGAVNTVVNQ--NGKLIGYNTDGKGFFMSLPSFV 119
Query: 350 RERQGINGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGA-RVIIFNR--NYERA--- 403
I GK +++G+GGA A+ A GA + +F R ++ER
Sbjct: 120 ---------------IKGKKMLILGSGGAATAIIVQAVLEGADEIFVFTRKTSFERVLQQ 164
Query: 404 -KALADAVSGE--ALHFEYLHEFFPEK---GMILANASAIGMEPNSDQSPVPKEA-LKAY 456
K + A S + L E E EK +L N +++GM+ + SPVP L
Sbjct: 165 MKQIQQAASTKISVLPLEQ-RELLQEKLNASALLVNGTSLGMDEKT--SPVPSTIRLSKS 221
Query: 457 ELVFDAVYTPRNTRLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAP 506
LV D +Y P T L+ A + VV+G+ M + QA F+L+TG P
Sbjct: 222 LLVADVIYQPFETPFLKWAKKQNVQVVNGLGMLLYQAAEAFKLWTGKDMP 271
>gi|269925229|ref|YP_003321852.1| shikimate 5-dehydrogenase [Thermobaculum terrenum ATCC BAA-798]
gi|269788889|gb|ACZ41030.1| shikimate 5-dehydrogenase [Thermobaculum terrenum ATCC BAA-798]
Length = 289
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 95/296 (32%), Positives = 139/296 (46%), Gaps = 34/296 (11%)
Query: 238 KIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLV--DDVKEFFRTYSGTDFAGFSVG 295
K G++ P+ HS P+ AF IY V +D++ FF ++ G +V
Sbjct: 2 KQVGVIGYPIKHSISPVFQQAAFDALGIEAIYKAYEVPPEDLRSFFFNLRNGNWLGVNVT 61
Query: 296 IPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALRERQGI 355
IPHK A DE GA NTII ++G+L +NTD I A+E+
Sbjct: 62 IPHKSAAAKLADERSQEVSFTGAANTIIS--MNGRLKAHNTDISGFILALEE-------- 111
Query: 356 NGVASHTSPIAGKIFVLVGAGGAGRALAFG-AKSRGARVIIFNRNYERAKALAD------ 408
NG I K V++G+GG RA+ + A + + R+ ++ +L
Sbjct: 112 NGFQ-----IKSKRAVVLGSGGTTRAVVYALAICEAQSIAVIGRSQDKVHSLISELKPFF 166
Query: 409 -----AVSGEALHFEYLHEFFPEKGMILANASAIGMEPNSDQ---SPVPKEALKAYELVF 460
V+G + + + + IL N + IGM+ +DQ SPV KE L + +VF
Sbjct: 167 EHKQVTVTGHSWEKDSIRRQI-QNSDILINTTPIGMK-GTDQEHLSPVSKEDLSSDLIVF 224
Query: 461 DAVYTPRNTRLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRKLVLE 516
D VY P T LL A +VGA+ +SG+EM I Q FRL+TG P D MRK ++
Sbjct: 225 DVVYNPIMTPLLTYAKDVGASTISGIEMLIYQGAESFRLWTGQEPPVDIMRKAAIK 280
>gi|296109340|ref|YP_003616289.1| shikimate 5-dehydrogenase [methanocaldococcus infernus ME]
gi|295434154|gb|ADG13325.1| shikimate 5-dehydrogenase [Methanocaldococcus infernus ME]
Length = 277
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 104/293 (35%), Positives = 152/293 (51%), Gaps = 29/293 (9%)
Query: 233 INPDTKIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLVDDVK-EFFRTY----SGT 287
++ TK+ GL+ +PV HS P++HN AF+ N +Y+ DVK E R
Sbjct: 1 MDAKTKLVGLIGHPVEHSLSPVMHNAAFKDKNLNYVYLAF---DVKPERLRFVVDGAKAL 57
Query: 288 DFAGFSVGIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIED 347
GF+V IPHK + D++ AK IGAVNT+ + D +GYNTD A A+E+
Sbjct: 58 GMVGFNVTIPHKVEIIKYLDQLSEEAKLIGAVNTV--KIEDDIAIGYNTDGIGARRALEE 115
Query: 348 ALRERQGINGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGARVIIFNRNYERAKALA 407
+ + K V+ GAGGA RA+AF ++ V+I NR E+AK LA
Sbjct: 116 EI-------------GKVKDKKIVIFGAGGAARAVAFEL-AKDNFVVIANRTLEKAKKLA 161
Query: 408 DAVSGEALHFEYLHEFFP---EKGMILANASAIGMEPNSDQSP-VPKEALKAYELVFDAV 463
+ E L+ E + E I+ NA+ +GM PN ++ P V KE L+ +V D V
Sbjct: 162 KEIE-EKLNREVGYSDLNVDLEDVDIVINATPVGMYPNVNEKPIVSKERLRKDMVVMDLV 220
Query: 464 YTPRNTRLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRKLVLE 516
Y P T LL+EA +VGA + G+ M I Q F+++TG + MR+ +L+
Sbjct: 221 YNPLETTLLKEAKKVGAKTIDGLGMLIYQGAEAFKIWTGVEPNIEVMRESILK 273
>gi|87123368|ref|ZP_01079219.1| shikimate / quinate 5-dehydrogenase [Synechococcus sp. RS9917]
gi|86169088|gb|EAQ70344.1| shikimate / quinate 5-dehydrogenase [Synechococcus sp. RS9917]
Length = 306
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 88/286 (30%), Positives = 137/286 (47%), Gaps = 32/286 (11%)
Query: 234 NPDTKIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYV--PMLVDDVKEFFRTYSGTDFAG 291
N T + GL+ +PV HS P++HN A N I++ P +D++ R G
Sbjct: 13 NAQTALVGLLGDPVHHSLSPVMHNAALEAMGLNWIFLALPTPANDLETVVRGLRAVGCRG 72
Query: 292 FSVGIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALRE 351
+V IPHK V C E+ PLA+ +GAVN ++ R +DG G NTD E I+ + +A +
Sbjct: 73 LNVTIPHKHSVVPLCAELSPLAQRLGAVNALVPR-VDGGWFGTNTDVEGFIAPLREAQSD 131
Query: 352 RQGINGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGA-RVIIFNRN-------YERA 403
QG + +++G GG+ RA+ S G ++ I R +
Sbjct: 132 WQG-------------RRALVLGCGGSARAIVAAITSLGCDQIQIAGRRPDALAAFQQDC 178
Query: 404 KALADAVSGEALHFEYLHEFFPEKGMILANASAIGM----EPN----SDQSPVPKEALKA 455
A A +++G H + E E ++ N + +GM P+ S SP + LK
Sbjct: 179 GAWAPSLTGLDWHHQAALEQALEAADLVVNTTPLGMASTHNPDAVLASPLSPGDIQRLKP 238
Query: 456 YELVFDAVYTPRNTRLLREAAEVGATVVSGVEMFIRQALGQFRLFT 501
V+D +YTPR TRLL +AA G + G+EM ++Q RL++
Sbjct: 239 ECWVYDIIYTPRPTRLLTDAAAHGCRTLDGLEMLVQQGAAALRLWS 284
>gi|421859666|ref|ZP_16291870.1| shikimate 5-dehydrogenase [Paenibacillus popilliae ATCC 14706]
gi|410830764|dbj|GAC42307.1| shikimate 5-dehydrogenase [Paenibacillus popilliae ATCC 14706]
Length = 297
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 90/292 (30%), Positives = 136/292 (46%), Gaps = 19/292 (6%)
Query: 233 INPDTKIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLV--DDVKEFFRTYSGTDFA 290
I+ T +F ++ +P+ HS P++HN A R N +Y V + +++ +
Sbjct: 16 IDSSTAVFAVIGDPIKHSTSPLMHNAALRELGLNAVYTAFHVASEQLEQAVQGMRALGMC 75
Query: 291 GFSVGIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALR 350
G +V IPHKE +A DEV A IGAVNTI+ R G+L+GYNTD + ++++ +
Sbjct: 76 GMNVTIPHKEAVMAHLDEVDESASVIGAVNTIVNR--SGRLIGYNTDGLGFVRSLQEEIF 133
Query: 351 ERQGINGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGARVIIFNRNYERAKALADAV 410
H S I G A L G + R+ I NR ERA+ LA +
Sbjct: 134 SNL-------HQSRILLIGAGGAARGIAYALLKAGCR----RLQIANRTLERAEVLARDL 182
Query: 411 SG----EALHFEYLHEFFPEKGMILANASAIGMEPNSDQSPVPKEALKAYELVFDAVYTP 466
S A+ + I+ + +++GM P+ + P + L+ +V D VY P
Sbjct: 183 SAFGTVAAVQLGTRPTIDAHEVDIVIHTTSVGMHPDGEAVPFDPDWLRPDMIVSDIVYNP 242
Query: 467 RNTRLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRKLVLEQF 518
T LLREA + G SG+ MF+ Q L+TG AP MR+ V
Sbjct: 243 LKTALLREAGKRGCRTHSGLGMFVYQGAIALELWTGAAAPVPLMREQVWNTL 294
>gi|422810317|ref|ZP_16858728.1| shikimate/quinate 5-dehydrogenase I beta [Listeria monocytogenes
FSL J1-208]
gi|378751981|gb|EHY62569.1| shikimate/quinate 5-dehydrogenase I beta [Listeria monocytogenes
FSL J1-208]
Length = 289
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 91/301 (30%), Positives = 147/301 (48%), Gaps = 35/301 (11%)
Query: 231 EHINPDTKIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPM--LVDDVKEFFRTYSGTD 288
I+ T++ GL+ P+ HSK PI++N +F+ + Y+ + V + + +
Sbjct: 3 NRISGTTRLLGLIGTPIDHSKSPIMYNYSFQKAGLDYAYLAFDTPIQKVADTIKAIKIFN 62
Query: 289 FAGFSVGIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDA 348
G +V +P K + D++ P A+ IGAVNTI+ +GKL G+ TD I+ + DA
Sbjct: 63 LRGANVTMPCKSEVLKHMDDLSPAARMIGAVNTIVNE--NGKLTGHITDGLGFIANLRDA 120
Query: 349 LRERQGINGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGAR-VIIFNRN---YERAK 404
++ +AGK ++GAGGA A+ GA+ + IFN YE+AK
Sbjct: 121 -------------SADVAGKKMTIIGAGGAATAIQVQCALDGAKEITIFNIKDAFYEKAK 167
Query: 405 ALADAVSGEA----LHFEYLHEFFPEK-------GMILANASAIGMEPNSDQSPVPKEAL 453
++ E +H L++ EK IL NA+ +GM PN ++P+ ++
Sbjct: 168 QTVTSIKQEVPNCIVHIYDLND--TEKLNAEIATSDILVNATLVGMHPNEHETPINNTSV 225
Query: 454 KAYEL-VFDAVYTPRNTRLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRK 512
EL V D +Y P+ T+LL +A G V G+ M + Q ++LFTG P +R
Sbjct: 226 FRKELIVTDIIYNPKKTQLLLDAEAAGCKTVGGLGMLLWQGAEAYKLFTGKDMPVSEVRD 285
Query: 513 L 513
L
Sbjct: 286 L 286
>gi|238893051|ref|YP_002917785.1| shikimate 5-dehydrogenase [Klebsiella pneumoniae subsp. pneumoniae
NTUH-K2044]
gi|238545367|dbj|BAH61718.1| shikimate 5-dehydrogenase [Klebsiella pneumoniae subsp. pneumoniae
NTUH-K2044]
Length = 292
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 92/303 (30%), Positives = 149/303 (49%), Gaps = 36/303 (11%)
Query: 231 EHINPDTKIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLV--DDVKEFFRTYSGTD 288
E I T++ GL++ P+ HS P +HN AF + + +Y+ V ++K+ + +
Sbjct: 8 ERITGHTELIGLIATPIRHSMSPTMHNEAFAYLGLDYVYLAFEVGNQELKDVVQGFRAMK 67
Query: 289 FAGFSVGIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDA 348
GF+V +P+K D++ P A+ +GAVNT++ DG L G+ TD + A+ +A
Sbjct: 68 LRGFNVSMPNKTEICQYLDKLSPAAQLVGAVNTVVND--DGVLTGHITDGTGYMRALSEA 125
Query: 349 LRERQGINGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGARVI-IFNRNYERAKALA 407
GI+ I GK ++GAGGA AL A G + I IFNR R K A
Sbjct: 126 -----GID--------IIGKKMTVLGAGGAATALCVQAALDGVKAISIFNR---RDKFFA 169
Query: 408 DAVSGEA---------LHFEYLHEFFP-----EKGMILANASAIGMEPNSDQSPVPKEA- 452
+A A +H L + + +IL NA+ +GM+P Q +P ++
Sbjct: 170 NAEETVAKIRHNTDCEIHLFDLDDHDKLRAEIDSSVILTNATGVGMKPFEGQMLLPDDSF 229
Query: 453 LKAYELVFDAVYTPRNTRLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRK 512
L+ +V D VY PR T LL A + G ++G+ M + Q F ++TG P D+++
Sbjct: 230 LRPDLIVSDVVYNPRKTHLLEVAEKKGCRTLNGLGMMLWQGARAFEIWTGKQMPVDYIKS 289
Query: 513 LVL 515
++
Sbjct: 290 ILF 292
>gi|46908470|ref|YP_014859.1| shikimate 5-dehydrogenase [Listeria monocytogenes serotype 4b str.
F2365]
gi|226224844|ref|YP_002758951.1| oxidoreductase [Listeria monocytogenes serotype 4b str. CLIP 80459]
gi|254825200|ref|ZP_05230201.1| shikimate 5-dehydrogenase [Listeria monocytogenes FSL J1-194]
gi|254853359|ref|ZP_05242707.1| shikimate 5-dehydrogenase [Listeria monocytogenes FSL R2-503]
gi|254931651|ref|ZP_05265010.1| shikimate 5-dehydrogenase [Listeria monocytogenes HPB2262]
gi|255520409|ref|ZP_05387646.1| shikimate 5-dehydrogenase [Listeria monocytogenes FSL J1-175]
gi|300763954|ref|ZP_07073950.1| shikimate 5-dehydrogenase [Listeria monocytogenes FSL N1-017]
gi|386732984|ref|YP_006206480.1| shikimate 5-dehydrogenase [Listeria monocytogenes 07PF0776]
gi|404281856|ref|YP_006682754.1| shikimate 5-dehydrogenase [Listeria monocytogenes SLCC2755]
gi|404287669|ref|YP_006694255.1| shikimate 5-dehydrogenase [Listeria monocytogenes serotype 7 str.
SLCC2482]
gi|405750634|ref|YP_006674100.1| shikimate 5-dehydrogenase [Listeria monocytogenes ATCC 19117]
gi|405753508|ref|YP_006676973.1| shikimate 5-dehydrogenase [Listeria monocytogenes SLCC2378]
gi|405756414|ref|YP_006679878.1| shikimate 5-dehydrogenase [Listeria monocytogenes SLCC2540]
gi|406705030|ref|YP_006755384.1| shikimate 5-dehydrogenase, putative [Listeria monocytogenes L312]
gi|424715118|ref|YP_007015833.1| Shikimate dehydrogenase [Listeria monocytogenes serotype 4b str.
LL195]
gi|424824044|ref|ZP_18249057.1| Shikimate dehydrogenase 3 [Listeria monocytogenes str. Scott A]
gi|46881741|gb|AAT05036.1| putative shikimate 5-dehydrogenase [Listeria monocytogenes serotype
4b str. F2365]
gi|225877306|emb|CAS06020.1| Putative oxidoreductase [Listeria monocytogenes serotype 4b str.
CLIP 80459]
gi|258606724|gb|EEW19332.1| shikimate 5-dehydrogenase [Listeria monocytogenes FSL R2-503]
gi|293583206|gb|EFF95238.1| shikimate 5-dehydrogenase [Listeria monocytogenes HPB2262]
gi|293594445|gb|EFG02206.1| shikimate 5-dehydrogenase [Listeria monocytogenes FSL J1-194]
gi|300515295|gb|EFK42346.1| shikimate 5-dehydrogenase [Listeria monocytogenes FSL N1-017]
gi|332312724|gb|EGJ25819.1| Shikimate dehydrogenase 3 [Listeria monocytogenes str. Scott A]
gi|384391742|gb|AFH80812.1| shikimate 5-dehydrogenase [Listeria monocytogenes 07PF0776]
gi|404219834|emb|CBY71198.1| shikimate 5-dehydrogenase, putative [Listeria monocytogenes ATCC
19117]
gi|404222708|emb|CBY74071.1| putative shikimate 5-dehydrogenase [Listeria monocytogenes
SLCC2378]
gi|404225614|emb|CBY76976.1| putative shikimate 5-dehydrogenase [Listeria monocytogenes
SLCC2540]
gi|404228491|emb|CBY49896.1| putative shikimate 5-dehydrogenase [Listeria monocytogenes
SLCC2755]
gi|404246598|emb|CBY04823.1| shikimate 5-dehydrogenase, putative [Listeria monocytogenes
serotype 7 str. SLCC2482]
gi|406362060|emb|CBY68333.1| shikimate 5-dehydrogenase, putative [Listeria monocytogenes L312]
gi|424014302|emb|CCO64842.1| Shikimate dehydrogenase [Listeria monocytogenes serotype 4b str.
LL195]
Length = 289
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 90/301 (29%), Positives = 147/301 (48%), Gaps = 35/301 (11%)
Query: 231 EHINPDTKIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPML--VDDVKEFFRTYSGTD 288
I+ T++ GL+ PV HSK PI++N +F+ + Y+ ++ V + + +
Sbjct: 3 NRISGTTRLLGLIGTPVDHSKSPIMYNYSFQKAGLDYAYLAFDTPIEKVADTIKAIKTFN 62
Query: 289 FAGFSVGIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDA 348
G +V +P K + D++ P A+ IGAVNTI+ DGKL G+ TD I+ + DA
Sbjct: 63 LRGANVTMPCKSEVLKHMDDLSPAARMIGAVNTIVNE--DGKLTGHITDGLGFIANLRDA 120
Query: 349 LRERQGINGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGAR-VIIFNRN---YERAK 404
+ + GK ++GAGGA A+ GA+ + IFN Y++AK
Sbjct: 121 -------------SVDVTGKKMTIIGAGGAATAIQVQCALDGAKEITIFNIKDAFYDKAK 167
Query: 405 ALADAVSGEA----LHFEYLHEFFPEK-------GMILANASAIGMEPNSDQSPVPKEAL 453
A ++ E +H L++ EK IL NA+ +GM PN ++P+ ++
Sbjct: 168 QTAASIKQEVPNCIVHIYDLND--TEKLNAEIATSDILVNATLVGMHPNEHETPISDTSV 225
Query: 454 KAYELVF-DAVYTPRNTRLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRK 512
EL+ D +Y P+ T+LL +A G V G+ M + Q ++LFTG P ++
Sbjct: 226 FRKELIVADIIYNPKKTQLLLDAEAAGCKTVGGLGMLLWQGAEAYKLFTGKDMPVSEVKN 285
Query: 513 L 513
L
Sbjct: 286 L 286
>gi|374324961|ref|YP_005078090.1| shikimate 5-dehydrogenase [Paenibacillus terrae HPL-003]
gi|357203970|gb|AET61867.1| shikimate 5-dehydrogenase [Paenibacillus terrae HPL-003]
Length = 289
Score = 126 bits (317), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 91/297 (30%), Positives = 138/297 (46%), Gaps = 40/297 (13%)
Query: 239 IFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLV--DDVKEFFRTYSGTDFAGFSVGI 296
+ G++ +P+ HSK P++H A + G +VP+ V D +++ + F G +V I
Sbjct: 15 LLGVLGDPIKHSKSPLMHKIALKAAGIEGDFVPLHVKPDQLEDAMKGIRALHFRGVNVTI 74
Query: 297 PHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALRERQGIN 356
PHK + DE+ A+ IGAVNTI+ +G+L GYNTD + + L+E +
Sbjct: 75 PHKVEVMKYLDEIDEGARLIGAVNTIVND--NGRLKGYNTDGIGYVRS----LKEETSVK 128
Query: 357 GVASHTSPIAGKIFVLVGAGGAGRALAFGA-KSRGARVIIFNRNYERAKALADAVSGEAL 415
+ G ++GAGGA R + + + VII NR ++A+ LA
Sbjct: 129 --------LKGTRIAVLGAGGAARGVIHALLEEQPESVIILNRTRDKAEQLA-------- 172
Query: 416 HFEYLHEFFPEKGM-------------ILANASAIGMEPNSDQSPVPKEALKAYELVFDA 462
E+ E P G +L N +++GM P SD+ P+ + +V D
Sbjct: 173 -LEWTTEAIPVTGYSNDEAESVLASVDVLINTTSVGMSPLSDELPLETSLIPEGIIVSDL 231
Query: 463 VYTPRNTRLLREAAEV-GATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRKLVLEQF 518
+Y P TR LRE+ E G TV G+ MF+ Q F F G D MR VL
Sbjct: 232 IYNPLETRFLRESREQRGCTVHGGLGMFVYQGAVAFEYFMGVAPAVDEMRAAVLRSL 288
>gi|311069169|ref|YP_003974092.1| shikimate 5-dehydrogenase [Bacillus atrophaeus 1942]
gi|419820181|ref|ZP_14343794.1| shikimate 5-dehydrogenase [Bacillus atrophaeus C89]
gi|310869686|gb|ADP33161.1| shikimate 5-dehydrogenase [Bacillus atrophaeus 1942]
gi|388475693|gb|EIM12403.1| shikimate 5-dehydrogenase [Bacillus atrophaeus C89]
Length = 280
Score = 126 bits (317), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 86/284 (30%), Positives = 139/284 (48%), Gaps = 22/284 (7%)
Query: 238 KIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLV--DDVKEFFRTYSGTDFAGFSVG 295
+++G++ NP+GHS P +HN A + +G Y V D++K+ + G +V
Sbjct: 3 QLYGVIGNPIGHSMSPDIHNAALKDLGLDGHYHAFQVENDNLKDAVKGIKALGMIGINVT 62
Query: 296 IPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALRERQGI 355
+PHK + D + AK +GAVNT+ R LVGYNTD E + ++ L +
Sbjct: 63 VPHKVAIMEHLDHIDESAKVLGAVNTV--RTEGDMLVGYNTDGEGFVKSLRKILDK---- 116
Query: 356 NGVASHTSPIAGKIFVLVGAGGAGRAL-AFGAKSRGARVIIFNRNYERAKALADAV---- 410
P+ +++GAGGA RA+ + R I NR E+A+ L +
Sbjct: 117 --------PVQDLSILMIGAGGAARAIFTTIVRENPKRFDICNRTLEKAEQLIQSSPSFQ 168
Query: 411 SGEALHFEYLHEFFPEKGMILANASAIGMEPNSDQSPVPKEALKAYELVFDAVYTPRNTR 470
+ + L + E E+ ++ + ++IGM P+ D P+ + +V D VY P T
Sbjct: 169 NKQVLTIKEAEENL-ERYDVIIHTTSIGMYPDIDAVPISLQRAANRAIVCDIVYNPIRTA 227
Query: 471 LLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRKLV 514
LL++A + G + GV MF+ QA F+L+TG D MR +V
Sbjct: 228 LLKQAEQKGLRTLDGVGMFVEQAALSFQLWTGQEPDIDKMRAIV 271
>gi|150261273|pdb|2HK7|A Chain A, Crystal Structure Of Shikimate Dehydrogenase From Aquifex
Aeolicus In Complex With Mercury At 2.5 Angstrom
Resolution
gi|150261274|pdb|2HK7|B Chain B, Crystal Structure Of Shikimate Dehydrogenase From Aquifex
Aeolicus In Complex With Mercury At 2.5 Angstrom
Resolution
gi|150261275|pdb|2HK8|A Chain A, Crystal Structure Of Shikimate Dehydrogenase From Aquifex
Aeolicus At 2.35 Angstrom Resolution
gi|150261276|pdb|2HK8|B Chain B, Crystal Structure Of Shikimate Dehydrogenase From Aquifex
Aeolicus At 2.35 Angstrom Resolution
gi|150261277|pdb|2HK8|C Chain C, Crystal Structure Of Shikimate Dehydrogenase From Aquifex
Aeolicus At 2.35 Angstrom Resolution
gi|150261278|pdb|2HK8|D Chain D, Crystal Structure Of Shikimate Dehydrogenase From Aquifex
Aeolicus At 2.35 Angstrom Resolution
gi|150261279|pdb|2HK8|E Chain E, Crystal Structure Of Shikimate Dehydrogenase From Aquifex
Aeolicus At 2.35 Angstrom Resolution
gi|150261280|pdb|2HK8|F Chain F, Crystal Structure Of Shikimate Dehydrogenase From Aquifex
Aeolicus At 2.35 Angstrom Resolution
gi|150261281|pdb|2HK8|G Chain G, Crystal Structure Of Shikimate Dehydrogenase From Aquifex
Aeolicus At 2.35 Angstrom Resolution
gi|150261282|pdb|2HK8|H Chain H, Crystal Structure Of Shikimate Dehydrogenase From Aquifex
Aeolicus At 2.35 Angstrom Resolution
Length = 269
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 78/276 (28%), Positives = 141/276 (51%), Gaps = 23/276 (8%)
Query: 233 INPDTKIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLVD--DVKEFFRTYSGTDFA 290
IN T+++G++ PV HS P+ N R+ N +Y+ ++ ++K+ F +
Sbjct: 2 INAQTQLYGVIGFPVKHSLSPVFQNALIRYAGLNAVYLAFEINPEELKKAFEGFKALKVK 61
Query: 291 GFSVGIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALR 350
G +V +P KE + D V AK IGAVNT+ + +GK GYNTD + +++ +
Sbjct: 62 GINVTVPFKEEIIPLLDYVEDTAKEIGAVNTV--KFENGKAYGYNTDWIGFLKSLKSLIP 119
Query: 351 ERQGINGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGARVIIFNRNYERAKALADAV 410
E + K +++GAGGA RA+ + GA+V ++NR E+A LA
Sbjct: 120 E-------------VKEKSILVLGAGGASRAVIYALVKEGAKVFLWNRTKEKAIKLAQKF 166
Query: 411 SGEALHFEYLHEFFPEKGMILANASAIGMEPNSDQSPVPKEALKAYELVFDAVYTPRNTR 470
E ++ E +K ++ N +++G++ + D + +K +V D +Y + T+
Sbjct: 167 PLEVVNS---PEEVIDKVQVIVNTTSVGLK-DEDPEIFNYDLIKKDHVVVDIIY--KETK 220
Query: 471 LLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAP 506
LL++A E GA ++ G+ M + Q + F+++ G P
Sbjct: 221 LLKKAKEKGAKLLDGLPMLLWQGIEAFKIWNGCEVP 256
>gi|150261283|pdb|2HK9|A Chain A, Crystal Structure Of Shikimate Dehydrogenase From Aquifex
Aeolicus In Complex With Shikimate And Nadp+ At 2.2
Angstrom Resolution
gi|150261284|pdb|2HK9|B Chain B, Crystal Structure Of Shikimate Dehydrogenase From Aquifex
Aeolicus In Complex With Shikimate And Nadp+ At 2.2
Angstrom Resolution
gi|150261285|pdb|2HK9|C Chain C, Crystal Structure Of Shikimate Dehydrogenase From Aquifex
Aeolicus In Complex With Shikimate And Nadp+ At 2.2
Angstrom Resolution
gi|150261286|pdb|2HK9|D Chain D, Crystal Structure Of Shikimate Dehydrogenase From Aquifex
Aeolicus In Complex With Shikimate And Nadp+ At 2.2
Angstrom Resolution
Length = 275
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 78/276 (28%), Positives = 141/276 (51%), Gaps = 23/276 (8%)
Query: 233 INPDTKIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLVD--DVKEFFRTYSGTDFA 290
IN T+++G++ PV HS P+ N R+ N +Y+ ++ ++K+ F +
Sbjct: 8 INAQTQLYGVIGFPVKHSLSPVFQNALIRYAGLNAVYLAFEINPEELKKAFEGFKALKVK 67
Query: 291 GFSVGIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALR 350
G +V +P KE + D V AK IGAVNT+ + +GK GYNTD + +++ +
Sbjct: 68 GINVTVPFKEEIIPLLDYVEDTAKEIGAVNTV--KFENGKAYGYNTDWIGFLKSLKSLIP 125
Query: 351 ERQGINGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGARVIIFNRNYERAKALADAV 410
E + K +++GAGGA RA+ + GA+V ++NR E+A LA
Sbjct: 126 E-------------VKEKSILVLGAGGASRAVIYALVKEGAKVFLWNRTKEKAIKLAQKF 172
Query: 411 SGEALHFEYLHEFFPEKGMILANASAIGMEPNSDQSPVPKEALKAYELVFDAVYTPRNTR 470
E ++ E +K ++ N +++G++ + D + +K +V D +Y + T+
Sbjct: 173 PLEVVNS---PEEVIDKVQVIVNTTSVGLK-DEDPEIFNYDLIKKDHVVVDIIY--KETK 226
Query: 471 LLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAP 506
LL++A E GA ++ G+ M + Q + F+++ G P
Sbjct: 227 LLKKAKEKGAKLLDGLPMLLWQGIEAFKIWNGCEVP 262
>gi|309775585|ref|ZP_07670585.1| shikimate dehydrogenase [Erysipelotrichaceae bacterium 3_1_53]
gi|308916679|gb|EFP62419.1| shikimate dehydrogenase [Erysipelotrichaceae bacterium 3_1_53]
Length = 290
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 93/305 (30%), Positives = 148/305 (48%), Gaps = 42/305 (13%)
Query: 231 EHINPDTKIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLV--DDVKEFFRTYSGTD 288
E I+ T++ GL++ P+ HSK P +HN AF + Y+ V +++++ + +
Sbjct: 3 ERISGHTELIGLIATPIRHSKSPKMHNEAFAKLGLDYAYLAFEVGNEELEDAVKGFKALK 62
Query: 289 FAGFSVGIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDA 348
G++V +P+K D + P A+ GAVNT++ +G+L G+ TD + +++DA
Sbjct: 63 VRGYNVSMPNKTVIGQYLDHLSPAAELCGAVNTVVND--NGELTGHITDGIGYMRSLKDA 120
Query: 349 LRERQGINGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGARVI-IFNRN---YERAK 404
GI+ + GK +VGAGGA A+ G + + IFNR +ERA+
Sbjct: 121 -----GID--------VVGKKVTIVGAGGAATAIEIQMALDGVKELSIFNRRDEFWERAE 167
Query: 405 --------------ALADAVSGEALHFEYLHEFFPEKGMILANASAIGMEPNSDQSPVPK 450
L D AL E E + ANA+ +GM+P Q +P
Sbjct: 168 QNVKNINEKTSCKATLYDLADTAALKQEI------EDSYLFANATGVGMKPLEGQMVIPD 221
Query: 451 EALKAYEL-VFDAVYTPRNTRLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDF 509
+ EL V D VY P T LLR A EVG ++G+ M + Q F L+TG P D+
Sbjct: 222 ASFLRKELIVTDVVYMPTETELLRVAKEVGCKTMNGLGMMLYQGAAAFELWTGKEMPIDY 281
Query: 510 MRKLV 514
M++++
Sbjct: 282 MKEIL 286
>gi|388545085|ref|ZP_10148369.1| shikimate/quinate 5-dehydrogenase [Pseudomonas sp. M47T1]
gi|388276725|gb|EIK96303.1| shikimate/quinate 5-dehydrogenase [Pseudomonas sp. M47T1]
Length = 271
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 84/265 (31%), Positives = 133/265 (50%), Gaps = 22/265 (8%)
Query: 255 LHNPAFRHTRFNGIYVPMLVDDVKEFFRTYSGTDFAGFSVGIPHKEPAVACCDEVHPLAK 314
+HN A+ + +V V+D G +V +P+K+ + D + A+
Sbjct: 23 IHNAAYAALGLDYTFVCFGVEDPVAAVTAIRTLGVRGMNVSMPYKQAVMPHLDAIDESAQ 82
Query: 315 SIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALRERQGINGVASHTSPIAGKIFVLVG 374
IGAVNTI +DG L GYNTD A+ A+++ R + GK +VG
Sbjct: 83 VIGAVNTI--NNVDGVLTGYNTDYLGAVRALQEVTR--------------LNGKRVAIVG 126
Query: 375 AGGAGRALAFGAKSRGARVIIFNRNYERAKALADAVSGEALHFEYLHEFFPEKGM-ILAN 433
AGGA RA+ +G GA+V +FNR+ ER LA ++ + + E F K I+ N
Sbjct: 127 AGGAARAVVYGCTQAGAQVTVFNRSAERGSELAQSLGAQ---WGGAVEHFHAKAFDIVIN 183
Query: 434 ASAIGMEPNSDQSPVPKEALKAYELVFDAVYTPRNTRLLREAAEVGATVVSGVEMFIRQA 493
A+++G + D +P+ L+++ +V D + P T LLR+A +G V+G M + QA
Sbjct: 184 ATSVGFK-QPDSNPLDGR-LQSHLIVMDVAFMPVQTALLRQARTLGCGTVAGTRMLVHQA 241
Query: 494 LGQFRLFTGGLAPEDFMRKLVLEQF 518
Q L+TG AP D M + +L++
Sbjct: 242 CRQIELYTGHDAPIDVMEQAMLQEI 266
>gi|333998596|ref|YP_004531208.1| putative 3-dehydroquinate dehydratase, type 1/shikimate
5-dehydrogenase [Treponema primitia ZAS-2]
gi|333741045|gb|AEF86535.1| putative 3-dehydroquinate dehydratase, type 1/shikimate
5-dehydrogenase [Treponema primitia ZAS-2]
Length = 506
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 128/527 (24%), Positives = 219/527 (41%), Gaps = 53/527 (10%)
Query: 11 VCTQLECETTEEMQASIEQAKVEGADLVELCIDSMEFSHISEVDKLIQHPTLPAIVSYRL 70
+C L +T + +E+ + + D+ EL +D +E + + + LP +++ R
Sbjct: 4 ICLCLTGKTIAKDLEVLEKHR-KYVDMAELRVDHLEPDERLLIRRFPEQAGLPVLLTIRR 62
Query: 71 K--SSRKSSDEACKNTCLQVLRRAL-----DLDVEFVEMDYEVASD-PLMSEIIYSRSNT 122
K + + E + + + + L D F +D E + P + E +R+
Sbjct: 63 KMDGGKFAGGEGAR---ISLFSKGLAFAEADRRHNFAYVDLEEDLNVPSLEEA--ARTFG 117
Query: 123 KIIVSSYLNGGGKPTTEKLGDVIACMQATGADVMKLEIAVDSITDLAPVFEMLTHCQ-VP 181
I+ SY N G E L I + G ++ K+ + D+ V+ +
Sbjct: 118 TRIIRSYHNLQG--VDEDLPGKIRGLLHVGDEIAKVAVMPHGFDDVLRVYRAAKDTAGIE 175
Query: 182 LIALAVGSRGLISQLLGPKFGGFLVYGSLGGK--------SVPGLPTLVSLKQVYQLEHI 233
I L +G G +++L G L Y S G + PG + L ++Y+ +
Sbjct: 176 KILLCMGHMGTSTRILAEYLGSHLSYASAEGTEQDSDFPPAAPGQISPRELVELYRFREL 235
Query: 234 NPDTKIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLVDDVKEFFRTYSGTDFAGFS 293
T++FG++ P+ S P N F + +YVP D V F + + G S
Sbjct: 236 TSQTRLFGILGYPLKVSSSPAFFNAVFTSENTDAVYVPFPSDSVDPFMQLAAEIKLQGVS 295
Query: 294 VGIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALRERQ 353
V IP+KE + ++ +++GA NT+I DG G NTD D+L +
Sbjct: 296 VTIPYKEKVIPYLNKKLGDVETLGACNTLIAEE-DG-WTGANTDAR----GFSDSLLDFI 349
Query: 354 GINGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGARVIIFNRNYERAKALADAVSGE 413
G + G ++GAGG +A+A + +I NR RA+ E
Sbjct: 350 G-------KTNFKGCRITIIGAGGVSKAVAAEIFRLKGKALILNRTVPRARE-------E 395
Query: 414 ALHFEYLHEFFPEKGMILANA--------SAIGMEPNSDQSPVPKEALKAYELVFDAVYT 465
A + + G L NA +++GM+P+ + P+ A K E+V D +Y
Sbjct: 396 AAPYRFAWGSLDTHGAELMNAYSDIIVQTTSVGMDPDIEGDPLEIYAFKGTEVVMDLIYK 455
Query: 466 PRNTRLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRK 512
P TR L AA G V++G +M IRQA Q+ + G P + +
Sbjct: 456 PERTRFLIRAAAAGCRVMNGHDMLIRQAKYQYSYYLGKEYPSKLVSR 502
>gi|315222537|ref|ZP_07864426.1| shikimate 5-dehydrogenase [Streptococcus anginosus F0211]
gi|315188223|gb|EFU21949.1| shikimate 5-dehydrogenase [Streptococcus anginosus F0211]
Length = 284
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 90/288 (31%), Positives = 142/288 (49%), Gaps = 33/288 (11%)
Query: 233 INPDTKIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLV--DDVKEFFRTYSGTDFA 290
I+ T++ +V+NP+ HS P +HN AF T NG+YV + DD+K D
Sbjct: 3 IDGYTRLVAVVANPIKHSISPFIHNAAFEQTGVNGVYVAWEISQDDLKATVENIRRYDMF 62
Query: 291 GFSVGIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALR 350
G ++ +P+K+ + DE+ P A+ IGAVNT++ + +GKL+GYNTD + ++ +
Sbjct: 63 GINLSMPYKQAVIPFLDELTPAAQMIGAVNTVVNQ--NGKLIGYNTDGKGFFMSLPSFV- 119
Query: 351 ERQGINGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGA-RVIIFNR--NYER-AKAL 406
I GK V++GAGGA A+ A GA + +F R ++ER ++ +
Sbjct: 120 --------------IKGKKMVMLGAGGAATAIIVQAALDGAEEIFVFTRQSSFERVSQKM 165
Query: 407 ADAVSGEALHFEYL----HEFFPEK---GMILANASAIGMEPNSDQSPVPKEA-LKAYEL 458
+ A L E EK +L N +++GM+ + P+P L L
Sbjct: 166 KEIQQKTATKIWVLPLENQELLQEKINVSALLVNGTSLGMDGKA--LPIPSSIRLPHSLL 223
Query: 459 VFDAVYTPRNTRLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAP 506
V D +Y P T L+ A VV+G+ M + QA F+L+TG P
Sbjct: 224 VADVIYQPFETPFLKWAKGQEVEVVNGLGMLLYQAAEAFKLWTGKKMP 271
>gi|365905896|ref|ZP_09443655.1| shikimate 5-dehydrogenase [Lactobacillus versmoldensis KCTC 3814]
Length = 297
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 99/299 (33%), Positives = 146/299 (48%), Gaps = 33/299 (11%)
Query: 232 HINPDTKIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLV--DDVKEFFRTYSGTDF 289
I+ T + GL +PVGHS P ++N +F+ N Y+ + D + T
Sbjct: 4 QIDGHTVMLGLFGSPVGHSGSPAMYNYSFQKAGINDSYLAFDIQEDQTAQALETMKFLHM 63
Query: 290 AGFSVGIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDAL 349
G SV +P K A D++ P AK IGAVNTI DG L G+NTD + + ++
Sbjct: 64 RGASVTMPCKTEAAKLVDKLSPAAKLIGAVNTITND--DGVLTGHNTDGKGYVENLKQ-- 119
Query: 350 RERQGINGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGARVI-IFN------RNYE- 401
NGV P GK F L+GAGGA A+A G + I IFN +N E
Sbjct: 120 ------NGV----DP-KGKTFTLLGAGGASTAIAVQLALDGVKEIHIFNPKDSFFKNAEL 168
Query: 402 RAKALADAVS------GEALHFEYLHEFFPEKGMILANASAIGMEPNSDQSPVPKEALKA 455
A+ ++ AV G+ E L++ E +LANA+ GM PN DQS + ++
Sbjct: 169 TAEKISKAVDTCKVTVGDINDQEQLNQSIAESD-VLANATKAGMAPNVDQSNIKNLSVFR 227
Query: 456 YELVF-DAVYTPRNTRLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRKL 513
+LV D VY+P T+++ +A G+ + G M + Q ++LFTG P D +++L
Sbjct: 228 DDLVVTDTVYSPEVTKMMADAKAHGSKTIGGKGMLVWQGAAAYKLFTGQDMPVDDVKRL 286
>gi|425450505|ref|ZP_18830330.1| Shikimate dehydrogenase [Microcystis aeruginosa PCC 7941]
gi|389768623|emb|CCI06322.1| Shikimate dehydrogenase [Microcystis aeruginosa PCC 7941]
Length = 302
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 82/307 (26%), Positives = 148/307 (48%), Gaps = 29/307 (9%)
Query: 225 KQVYQLEHINPDTKIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLV--DDVKEFFR 282
K + + IN TK+ G++ +P+GH+ P +HN A N +Y+P+ + +++
Sbjct: 12 KPTFFMTIINGKTKLLGVIGDPIGHTLSPPMHNAAIDALGLNYVYLPLPIAPENLATAIA 71
Query: 283 TYSGTDFAGFSVGIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAI 342
S D GFSV IPHK + ++ A+ +GAVNT+ R + G NTD + +
Sbjct: 72 GLSAIDLEGFSVTIPHKLAIIPLLSQITEKARLVGAVNTVWRTKTGWQ--GTNTDVDGFL 129
Query: 343 SAIEDALRERQGINGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRG-ARVIIFNRNYE 401
+ ++ ++ +N V ++G GGA RA+ G ++ + RN +
Sbjct: 130 APLKSLDKDWSRVNPV-------------ILGNGGAARAVVVACAQLGCGKIHVVGRNQK 176
Query: 402 RAKALADAVSGEALH-------FEYLHEFFPEKGMILANASAIGMEPNSDQSPVPKEALK 454
+ ++ + +L+ ++ L P +++ N++ IGM P +QSPV E L
Sbjct: 177 KLDPFKESWANTSLYDLLEVHGWDELEGLLPTTELLI-NSTPIGMSPQGEQSPVELELLD 235
Query: 455 ---AYELVFDAVYTPRNTRLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMR 511
+ + +D +Y PR T+ LR A G ++ G+EM + Q ++ G P MR
Sbjct: 236 LLPSSAIAYDLIYNPRPTKFLRLARTRGIRIIDGLEMLVNQGAIALEIWLGQPVPVSVMR 295
Query: 512 KLVLEQF 518
+ +L+QF
Sbjct: 296 EALLKQF 302
>gi|313679943|ref|YP_004057682.1| shikimate dehydrogenase [Oceanithermus profundus DSM 14977]
gi|313152658|gb|ADR36509.1| shikimate dehydrogenase [Oceanithermus profundus DSM 14977]
Length = 247
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 83/230 (36%), Positives = 124/230 (53%), Gaps = 19/230 (8%)
Query: 288 DFAGFSVGIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIED 347
+FAG +V +PHK + DE+ P+A +IGAVNTI+ R +G+LVG+NTD + A+E
Sbjct: 35 EFAGVNVTVPHKRRVLPLLDELDPVAAAIGAVNTIVNR--EGRLVGHNTDADGFYWALE- 91
Query: 348 ALRERQGINGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGARVIIFNRNYERAKALA 407
R G+ G+ VL GAGGA RA+ +RG V ++NR RA+ L
Sbjct: 92 ----RDGL---------CPGEALVL-GAGGAARAVVHALVTRGWLVGVYNRTLARAQGLV 137
Query: 408 DAVSGEALHFEYLHEFFPEKGMILANASAIGMEPNSDQSPVPKEALKAYELVFDAVYTPR 467
+ V G + + L + + +L NA+++G++ + + SP+P L V D VY P
Sbjct: 138 EEVGGWLVVPQKLEKAV-RRTPLLVNATSVGLD-DPEASPLPPGVLPESGGVVDLVYRPL 195
Query: 468 NTRLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRKLVLEQ 517
TRLLREA G G+ M + Q + F L+TG AP M + + E+
Sbjct: 196 ETRLLREARAAGLATQDGLAMLLGQGVRAFELWTGRPAPVAVMERALREE 245
>gi|298490426|ref|YP_003720603.1| shikimate 5-dehydrogenase ['Nostoc azollae' 0708]
gi|298232344|gb|ADI63480.1| shikimate 5-dehydrogenase ['Nostoc azollae' 0708]
Length = 298
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 82/283 (28%), Positives = 140/283 (49%), Gaps = 28/283 (9%)
Query: 231 EHINPDTKIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLV--DDVKEFFRTYSGTD 288
+ I TK+ G++ +PV HS P++HN A + +Y+P + ++++ ++
Sbjct: 10 QQITGKTKLLGVIGHPVEHSLSPVMHNAALTKLGLDYVYLPFPIAPENLEIAIAGFAAIG 69
Query: 289 FAGFSVGIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDA 348
G SV IPHK+ + E+ P+A++IGAVNT+ + K VG NTD E I+ ++
Sbjct: 70 VVGLSVTIPHKQAIIPILTEISPIAQAIGAVNTVTHQ--GNKWVGTNTDVEGFIAPLQTT 127
Query: 349 LRERQGINGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRG-ARVIIFNRNYERAKALA 407
++ SH K V++G GGA RA+ G G A + + RN + K
Sbjct: 128 YQQDW------SH------KRAVILGNGGAARAIVAGCVQLGLAEIHLVGRNMYKLKEFR 175
Query: 408 DA------VSGEALH-FEYLHEFFPEKGMILANASAIGMEPNSDQSPVPKE---ALKAYE 457
+ V +H +E L + P + L N + IGM P D+SP+ E L +
Sbjct: 176 HSWQYSPYVDKFQVHAWEELPKLIPLANL-LVNTTPIGMYPQVDESPLSAEDMANLPSGA 234
Query: 458 LVFDAVYTPRNTRLLREAAEVGATVVSGVEMFIRQALGQFRLF 500
+ +D +Y P+ T+ L+ A GA + G+EM ++Q +++
Sbjct: 235 IAYDLIYIPKPTKFLKLAETQGAIAIDGLEMLVQQGAAALKIW 277
>gi|47096854|ref|ZP_00234434.1| shikimate 5-dehydrogenase, putative [Listeria monocytogenes str.
1/2a F6854]
gi|254912797|ref|ZP_05262809.1| conserved hypothetical protein [Listeria monocytogenes J2818]
gi|254937124|ref|ZP_05268821.1| shikimate 5-dehydrogenase [Listeria monocytogenes F6900]
gi|386047892|ref|YP_005966224.1| shikimate 5-dehydrogenase [Listeria monocytogenes J0161]
gi|47014773|gb|EAL05726.1| shikimate 5-dehydrogenase, putative [Listeria monocytogenes str.
1/2a F6854]
gi|258609726|gb|EEW22334.1| shikimate 5-dehydrogenase [Listeria monocytogenes F6900]
gi|293590792|gb|EFF99126.1| conserved hypothetical protein [Listeria monocytogenes J2818]
gi|345534883|gb|AEO04324.1| shikimate 5-dehydrogenase [Listeria monocytogenes J0161]
Length = 289
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 90/299 (30%), Positives = 147/299 (49%), Gaps = 35/299 (11%)
Query: 233 INPDTKIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLV--DDVKEFFRTYSGTDFA 290
I+ T++ GL+ PV HSK PI++N +F+ + Y+ + V + + +
Sbjct: 5 ISGTTRLLGLIGTPVDHSKSPIMYNHSFQKAGLDYAYLAFDTPTEKVTDAIKAIKTFNLR 64
Query: 291 GFSVGIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALR 350
G +V +P K + D++ P A+ IGAVNTI+ DGKL G+ TD I+ + DA
Sbjct: 65 GANVTMPCKSEVLKYMDDLSPAARMIGAVNTIVNE--DGKLTGHITDGLGFIANLRDA-- 120
Query: 351 ERQGINGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGAR-VIIFNRN---YERAKAL 406
+ +AGK ++GAGGA A+ GA+ + IFN Y++AK
Sbjct: 121 -----------SVDVAGKKMTIIGAGGAATAIQVQCALDGAKEITIFNIKDAFYDKAKQT 169
Query: 407 ADAVSGEA----LHFEYLHEFFPEK-------GMILANASAIGMEPNSDQSPVPKEALKA 455
A ++ E +H L++ EK IL NA+ +GM PN ++P+ ++
Sbjct: 170 AASIKQEVPNCIVHIYDLND--TEKLNAEITTSDILVNATLVGMHPNEHETPISDTSVFR 227
Query: 456 YELVF-DAVYTPRNTRLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRKL 513
EL+ D +Y P+ T+LL ++ G V G+ M + Q ++LFTG P ++ L
Sbjct: 228 KELIVADIIYNPKKTQLLLDSEVAGCKTVGGLGMLLWQGAEAYKLFTGKDMPVSEVKDL 286
>gi|422806705|ref|ZP_16855136.1| shikimate 5-dehydrogenase [Escherichia fergusonii B253]
gi|324112516|gb|EGC06493.1| shikimate 5-dehydrogenase [Escherichia fergusonii B253]
Length = 287
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 86/300 (28%), Positives = 144/300 (48%), Gaps = 30/300 (10%)
Query: 231 EHINPDTKIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLVDD--VKEFFRTYSGTD 288
E I T++ GL++ P+ HS P +HN AF H + +Y+ VD+ +K+ + +
Sbjct: 3 ERITGHTELIGLIATPIRHSMSPTMHNEAFAHLGLDYVYLAFEVDNQELKDVVQGFRALK 62
Query: 289 FAGFSVGIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDA 348
GF+V +P+K D + P A+ +GAVNT++ DG L G+ TD + A+++A
Sbjct: 63 LRGFNVSMPNKTEICQYLDNLSPAAQLVGAVNTVVND--DGILTGHITDGTGYMRALKEA 120
Query: 349 LRERQGINGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGARVI-IFNR------NYE 401
+ GK ++GAGGA A+ A G + I IFN+ N E
Sbjct: 121 -------------NIDVIGKKMTVLGAGGAATAICVQAALDGVKEISIFNKRDKFFPNAE 167
Query: 402 RAKALADAVSGEALHFEYLHEFFP-----EKGMILANASAIGMEPNSDQSPVPKEA-LKA 455
+ A + +H L + + ++L NA+ +GM+P Q +P + L+
Sbjct: 168 QTVAKIRNNTDCEIHLFDLDDHDKLRAEIDSSVLLTNATGVGMKPFEGQMLLPDASFLRP 227
Query: 456 YELVFDAVYTPRNTRLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRKLVL 515
+V D VY PR T LL A G ++G+ M + Q F ++TG P D+++ ++
Sbjct: 228 DLIVSDVVYNPRKTHLLEVAENSGCRTINGLGMMLWQGAAAFEIWTGKEMPVDYIKSILF 287
>gi|424814987|ref|ZP_18240138.1| shikimate 5-dehydrogenase [Escherichia fergusonii ECD227]
gi|325496007|gb|EGC93866.1| shikimate 5-dehydrogenase [Escherichia fergusonii ECD227]
Length = 287
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 87/300 (29%), Positives = 144/300 (48%), Gaps = 30/300 (10%)
Query: 231 EHINPDTKIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLVDD--VKEFFRTYSGTD 288
E I T++ GL++ P+ HS P +HN AF H + +Y+ VD+ +K+ + +
Sbjct: 3 ERITGHTELIGLIATPIRHSMSPTMHNEAFAHLGLDYVYLAFEVDNQELKDVVQGFRALK 62
Query: 289 FAGFSVGIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDA 348
GF+V +P+K D + P A+ +GAVNT++ DG L G+ TD + A+++A
Sbjct: 63 LRGFNVSMPNKTEICQYLDNLSPAAQLVGAVNTVVND--DGILTGHITDGTGYMRALKEA 120
Query: 349 LRERQGINGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGARVI-IFNR------NYE 401
+ GK ++GAGGA A+ A G + I IFN+ N E
Sbjct: 121 -------------NIDVIGKKMTVLGAGGAATAICVQAALDGVKEISIFNKRDKFFPNAE 167
Query: 402 RAKALADAVSGEALHFEYLHEFFPEKG-----MILANASAIGMEPNSDQSPVPKEA-LKA 455
+ A + +H L + + ++L NA+ +GM+P Q +P + L+
Sbjct: 168 QTVAKIRNNTDCEIHLFDLDDHDKLRAEIDCSVLLTNATGVGMKPFEGQMLLPDASFLRP 227
Query: 456 YELVFDAVYTPRNTRLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRKLVL 515
+V D VY PR T LL A G V+G+ M + Q F ++TG P D+++ ++
Sbjct: 228 DLIVSDVVYNPRKTHLLEVAENSGCRTVNGLGMMLWQGAAAFEIWTGKEMPVDYIKSILF 287
>gi|294494923|ref|YP_003541416.1| shikimate dehydrogenase [Methanohalophilus mahii DSM 5219]
gi|292665922|gb|ADE35771.1| shikimate dehydrogenase [Methanohalophilus mahii DSM 5219]
Length = 268
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 101/281 (35%), Positives = 142/281 (50%), Gaps = 20/281 (7%)
Query: 238 KIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLVDD--VKEFFRTYSGTDFAGFSVG 295
K+FG++ +P+ HS P +HN AFR + Y V +K F G ++
Sbjct: 3 KVFGVLGDPIEHSLSPAMHNAAFRELEMDCEYHAFRVRHKYLKNAILGAQAMGFGGLNIT 62
Query: 296 IPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALRERQGI 355
+PHKE A+ + LA+ IGAVNT+ + + G+NTD A A+ +A
Sbjct: 63 VPHKEKALEFTNP-DTLARRIGAVNTV---SFNDGIRGHNTDGLGAEMALLEA------- 111
Query: 356 NGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGARVIIFNRNYERAKALADAVSGEAL 415
GV + S + VLVGAGGA RA+AF +GA V I NR E+A+ LA+ V
Sbjct: 112 -GVGINASNV-----VLVGAGGAARAIAFHFAEKGAGVTIANRTPEKAEVLAEDVGCSHA 165
Query: 416 HFEYLHEFFPEKGMILANASAIGMEPNSDQSPVPKEALKAYELVFDAVYTPRNTRLLREA 475
E L E + IL NA++ GM P+ D + ++ L VFD VY P T+LL +A
Sbjct: 166 GLENLKELLQDSD-ILINATSAGMHPHIDSTIASRDILHPGLAVFDIVYNPLQTKLLHQA 224
Query: 476 AEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRKLVLE 516
GA + GV M + Q FR++TG P + MR VLE
Sbjct: 225 ELAGAKPIGGVAMLVHQGAEAFRIWTGQKPPVEVMRNAVLE 265
>gi|126738509|ref|ZP_01754214.1| shikimate 5-dehydrogenase [Roseobacter sp. SK209-2-6]
gi|126720308|gb|EBA17014.1| shikimate 5-dehydrogenase [Roseobacter sp. SK209-2-6]
Length = 277
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 104/290 (35%), Positives = 145/290 (50%), Gaps = 24/290 (8%)
Query: 236 DTKI--FGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLVD--DVKEFFRTYSGTDFAG 291
D KI G++ PV HSK P L G YVPM V+ D++ RT F G
Sbjct: 3 DKKIPLAGVIGCPVAHSKSPQLQTHWLTTLGIAGHYVPMHVEAEDLETVIRTLPKAGFVG 62
Query: 292 FSVGIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALRE 351
+V IPHKE + D++ AK +GA NT+I RP DG ++ NTD I+ +
Sbjct: 63 ANVTIPHKEAVMEIADKITDRAKLMGAANTLIFRP-DGSIMADNTDGYGFITNL------ 115
Query: 352 RQGINGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRG-ARVIIFNRNYERAKALADAV 410
QG A + +P +G VL GAGGA RA+ G +++ NR ERA+ L
Sbjct: 116 HQG----APNWNPGSGPAAVL-GAGGACRAVIASLLEAGIPEIMLTNRTQERAEKLRKEF 170
Query: 411 SGEALHFEYLHE-FFPEKGMILANASAIGMEPNSDQSPVPKEALKAYELVFDAVYTPRNT 469
+ E+LH E ++ N +++GME + VP + L ++V D +YTP T
Sbjct: 171 GKKIKVVEWLHAGNIIEDAKLVVNTTSLGME-GKPRLRVPLDGLAPDKVVTDLIYTPLKT 229
Query: 470 RLLREAAEVGATVVSGVEMFIRQALGQF-RLFTGGLAPE--DFMRKLVLE 516
L++ A EVG TVV G+ M + QA+ F R F G PE D R VL+
Sbjct: 230 HLIKTAEEVGCTVVDGLGMLLHQAVPGFERWF--GQRPEVDDETRAAVLK 277
>gi|407464424|ref|YP_006775306.1| shikimate 5-dehydrogenase [Candidatus Nitrosopumilus sp. AR2]
gi|407047612|gb|AFS82364.1| shikimate 5-dehydrogenase [Candidatus Nitrosopumilus sp. AR2]
Length = 273
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 85/290 (29%), Positives = 146/290 (50%), Gaps = 26/290 (8%)
Query: 237 TKIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLV--DDVKEFFRTYSGTDFAGFSV 294
+K F ++ +P+ HS P +H+ AFR + Y+ + ++ E GF+V
Sbjct: 2 SKSFAVIGDPIDHSLSPNIHSAAFREMNLDSSYIAYRIPKGELAEGIEGLKKIKIDGFNV 61
Query: 295 GIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALRERQG 354
IPHK + D++ IGAVNT+ + DG L GYNTD + + + ++++
Sbjct: 62 TIPHKIEMMKYLDKIDESCSLIGAVNTVSNK--DGVLKGYNTDMDGFL----EPFKKKE- 114
Query: 355 INGVASHTSPIAGKIFVLVGAGGAGRALAFG-AKSRGARVIIFNRNYERAKALAD----- 408
I+ +L+GAGGA RA+ G AK + + I NR E+AK L+
Sbjct: 115 --------LKISDTKVLLLGAGGAARAIVAGFAKEKAKSITIANRTLEKAKDLSKFAKSI 166
Query: 409 AVSGEALHFEYLHEFFPEKGMILANASAIGMEPNSDQSPVPKEALKAYELVFDAVYTPRN 468
+ A+ E + E + +I+ NA++IG+ ++ SP+ + + +V+D VY P N
Sbjct: 167 GLDANAIKIEDVKESAKDYDIIV-NATSIGLR--NEPSPISLDGINEKTIVYDIVYMPMN 223
Query: 469 TRLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRKLVLEQF 518
T ++ A E + ++ G EM + QA+ F ++ G AP + M+K +L F
Sbjct: 224 TDFIKNAKEKKSIIIYGYEMLLGQAVRSFEIWHGIEAPYNAMKKALLGGF 273
>gi|448338817|ref|ZP_21527852.1| shikimate 5-dehydrogenase [Natrinema pallidum DSM 3751]
gi|445621292|gb|ELY74768.1| shikimate 5-dehydrogenase [Natrinema pallidum DSM 3751]
Length = 267
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 111/280 (39%), Positives = 147/280 (52%), Gaps = 25/280 (8%)
Query: 238 KIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPML--VDDVKEFFRTYSGTDFAGFSVG 295
++GL+ NPVGHS P +H A+ Y DD+++ R AG +V
Sbjct: 2 DVYGLLGNPVGHSLSPPMHEAAYDELGLEARYATFEPEADDIEDAIRGADALGIAGLNVT 61
Query: 296 IPHKEPAVACCDEVHP--LAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALRERQ 353
IP K+ A + V P LA IGAVNTI G GYNTD AI A+ ALRE
Sbjct: 62 IPFKQ---AALELVAPEDLATRIGAVNTIDFSG-SGPPTGYNTD---AIGALR-ALRE-- 111
Query: 354 GINGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGARVIIFNRNYERAKALADAVSGE 413
H + G+ V+VGAGGAGRA+AFG GA V + NR A LA AV
Sbjct: 112 -------HDVALEGEQAVVVGAGGAGRAIAFGLADAGATVAVANRTESTAHDLAAAVPRA 164
Query: 414 ALH-FEYLHEFFPEKGMILANASAIGMEPNSDQSPVPKEALKAYELVFDAVYTPRNTRLL 472
H L E + +L NA+++GM ++D +PVP++AL V DAVY+P TRLL
Sbjct: 165 TGHGLAALEELLADAD-VLVNATSVGM--DADATPVPEDALHEGLAVLDAVYSPLETRLL 221
Query: 473 REAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRK 512
R+AA+ GAT + G M + Q + F ++TG AP D M +
Sbjct: 222 RDAADAGATTIDGAWMLLYQGVEAFEIWTGRDAPVDVMNE 261
>gi|304316729|ref|YP_003851874.1| shikimate 5-dehydrogenase [Thermoanaerobacterium
thermosaccharolyticum DSM 571]
gi|302778231|gb|ADL68790.1| shikimate 5-dehydrogenase [Thermoanaerobacterium
thermosaccharolyticum DSM 571]
Length = 283
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 93/296 (31%), Positives = 156/296 (52%), Gaps = 30/296 (10%)
Query: 232 HINPDTKIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLV--DDVKEFFRTYSGTDF 289
H+N T I+G++ +P+GHS P +HN AF N +YV V +++K+
Sbjct: 2 HVNAKTDIYGIIGHPIGHSLSPFIHNAAFESVNLNSVYVSFDVHEENLKDAILGIKALGI 61
Query: 290 AGFSVGIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDAL 349
G +V +PHKE + D + AK IGAVNTI + +G L GYNTD ++ ++L
Sbjct: 62 KGINVTVPHKENVMKYLDYISDEAKLIGAVNTI--KNNNGILEGYNTD----VTGFTESL 115
Query: 350 RERQGINGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGAR-VIIFNRNYERAKALAD 408
+E H + GK V++GAGGA RA+A G G + ++I NR+ E+A+ L++
Sbjct: 116 KE---------HDIVVEGKNAVILGAGGAARAVAVGLSLTGVKSIMIANRSKEKARNLSN 166
Query: 409 AVSGEA------LHFEYLHEFFPEKGMILANASAIGMEPNSDQSPVPKEALKAYELVFDA 462
+ + ++ L++ E+ IL N +++GM P+ + SPV + + V+D
Sbjct: 167 YIKNNLGINCIDVTYDDLNQL--EEIDILVNVTSVGMFPDINLSPVDESIAVKAKFVYDI 224
Query: 463 VYTPRNTRLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRKLVLEQF 518
+Y P T+LL A + ++G +M I QA F+++TG +F + ++L
Sbjct: 225 IYNPEKTQLLSYAEKHSIRNLNGFDMLINQANHSFKIWTG----MNFNKNIILNTL 276
>gi|392409696|ref|YP_006446303.1| shikimate dehydrogenase [Desulfomonile tiedjei DSM 6799]
gi|390622832|gb|AFM24039.1| shikimate dehydrogenase [Desulfomonile tiedjei DSM 6799]
Length = 280
Score = 125 bits (315), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 86/293 (29%), Positives = 144/293 (49%), Gaps = 34/293 (11%)
Query: 237 TKIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLV--DDVKEFFRTYSGTDFAGFSV 294
T + G++ PV HS P +HN AFR + YVP+ V +V + + F G +V
Sbjct: 6 TNLVGIIGFPVSHSLSPTMHNAAFRALNMDWKYVPLSVRPQNVPDALKGLIALGFRGANV 65
Query: 295 GIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALRERQG 354
+PHKE +++ A+ IGAVNTI+ + + L G+NTD
Sbjct: 66 TVPHKEKVTPYLNDISADAQQIGAVNTILVQ--EDTLSGFNTDW---------------- 107
Query: 355 INGVASHTSPI----AGKIFVLVGAGGAGRALAFGAKSRGARVIIFNRNYERAKALADAV 410
+G +H + I +G +++G+GG+ RA+++ RGA + I +RN A + D +
Sbjct: 108 -SGFLNHLTEIGFDPSGAKALILGSGGSARAVSYSLCQRGADISILSRNTGTAGLIIDEL 166
Query: 411 SGEA-------LHFEYLHEFFPEKGMILANASAIGMEPNSDQSPVPKE-ALKAYELVFDA 462
S ++ + E L + + +++ N + +GM P + SP P + L +D
Sbjct: 167 SSQSAQNRIGSISAESLRDSARDFDLVV-NTTPLGMTPLEELSPWPHDIGFPRRALAYDL 225
Query: 463 VYTPRNTRLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRKLVL 515
VY P TR L A + GA V+G+ M + QA F+++T AP M++ +L
Sbjct: 226 VYNPAKTRFLEIAEDSGALAVNGLGMLVHQAAEAFKIWTDREAPVHVMKEAIL 278
>gi|271499360|ref|YP_003332385.1| Shikimate dehydrogenase substrate-binding domain-containing protein
[Dickeya dadantii Ech586]
gi|270342915|gb|ACZ75680.1| Shikimate dehydrogenase substrate binding domain protein [Dickeya
dadantii Ech586]
Length = 288
Score = 125 bits (314), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 95/291 (32%), Positives = 143/291 (49%), Gaps = 32/291 (10%)
Query: 238 KIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLVDDVKEFFRTYSGTD---FAGFSV 294
++ GL++ P+ HS P + N A Y+ VD+ F + +G G V
Sbjct: 8 ELIGLMAYPIRHSLSPEMQNKALEEVGLPYTYMAFEVDNTT-FPQAIAGLKALKMRGTGV 66
Query: 295 GIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALRERQG 354
+P+K+ A DE+ P AK +GA+NTI+ DG L GYNTD I AI+++ G
Sbjct: 67 SMPNKQLACDYVDELTPAAKLVGAINTIVND--DGYLKGYNTDGTGHIRAIKES-----G 119
Query: 355 INGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGARVI-IFNRN---YERAKALADAV 410
+ I GK VLVGAGGA A+ A G + I +FNR YE+A A A V
Sbjct: 120 FD--------IKGKTMVLVGAGGASTAIGAQAAIEGIKAIKLFNRRDEFYEKALAFAKRV 171
Query: 411 SGEALHFEYLHEFFPEKGM--------ILANASAIGMEPNSDQSPVP-KEALKAYELVFD 461
+ +H+ ++ IL N + +GM+P ++S V K L+ LV +
Sbjct: 172 NDNTDCIVTVHDLGDQQAFADAIASADILTNGTKLGMKPLENESIVTDKSLLRPGLLVTE 231
Query: 462 AVYTPRNTRLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRK 512
VY P T+LL+ A + G + G M + Q QF+L+TG P ++++K
Sbjct: 232 CVYNPHITKLLQMAMDAGCKTIDGYGMLLWQGAEQFKLWTGKDFPLEYIKK 282
>gi|428180770|gb|EKX49636.1| hypothetical protein GUITHDRAFT_67756, partial [Guillardia theta
CCMP2712]
Length = 1505
Score = 125 bits (314), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 141/503 (28%), Positives = 222/503 (44%), Gaps = 40/503 (7%)
Query: 34 GADLVELCIDSMEFSHISEVDKLIQHPTLPAIVSYRLKSSRKSSDEACK-----NTCLQV 88
GAD++E +D + S S ++ +QH L + + + + +S + K L +
Sbjct: 1008 GADVLEFRVDLL--SDCSLLNARLQHAILRRVATLPILWTVRSVSQGGKFAGSEEEMLAL 1065
Query: 89 LRRALDLDVEFVEMDYEVASDPLMSEIIYSRSNTKIIVSSYLNGGGKP-TTEKLGDVIAC 147
L+ L L EFV D E M + + + + +V+S+ + + T E+L +
Sbjct: 1066 LQLGLRLGCEFV--DVESCWSTAMCKAVVDKKGSSRVVASFHDFSERAYTAEELEKLFLR 1123
Query: 148 MQATG-ADVMKLEIAVDSITDLAPVFEMLTH----CQVPLIALAVGSRGLISQLLGPKFG 202
++ G ADV+K+ I T +A + + +P + L +G G +S++L KF
Sbjct: 1124 LRMQGGADVVKVAIRTTKATQVADMQHAINRFRARSSLPAVGLCMGEEGKLSRVLN-KFL 1182
Query: 203 GFLVYGSLGGKSVPGLPTLVSLKQVYQLEHINPDTKIFGLVSNPVGHSKGPILHNPAFRH 262
F + L G + PG ++++ + P T F L +P+ S P +HN AF
Sbjct: 1183 TFSTHPLLPGTAAPGQLVAEDIRRLKVELGLLPATCSFFLFGSPIAKSASPAMHNAAFAA 1242
Query: 263 TRFNGI-YVPMLVDDVKEFFRTYSGTDFAGFSVGIPHKEPAVACCDEVHPLAKSIGAVNT 321
G Y DV T S F G SV IP KE + + A+ IGAVNT
Sbjct: 1243 CGLKGWSYERCETADVSVALETISSASFGGGSVTIPLKEELLPHMHILTDSARRIGAVNT 1302
Query: 322 I-IRRPIDGK--LVGYNTDCESAISAIEDALRERQGINGVASHTSPIAGKIFVLVGAGGA 378
I ++R DG L+G NTD + ++D L R+ G +LVGAGG
Sbjct: 1303 ITVKRGGDGSRILIGDNTDWVAIHRLVQDRLNMRRLAQGGEPRV--------LLVGAGGT 1354
Query: 379 GRALAFGAKS-RG--ARVIIFNRNYERAKALADAVSGEALHFEYLHEFFPEKGMILANAS 435
RA + K RG V+++NR RA+ALA E + E L + G+I++
Sbjct: 1355 ARAAMYALKKLRGITGPVLVYNRTKSRAEALAAEFGAEVV--EDLSSV-TQLGVIVSTI- 1410
Query: 436 AIGMEPNSDQSPVPKEALKAYELVFDAVYTPRNTRLLREAAEVGATVVSGVEMFIRQALG 495
P + +P+ L+A ++ DA Y P T L + AA G ++ G M QA
Sbjct: 1411 -----PPDGHAVIPETLLQARPIMLDASYLPGGTSLSQRAAAAGCDLIIGPHMLFEQATY 1465
Query: 496 QFRLFTGGLAPEDFMRKLVLEQF 518
Q +TG A M K + F
Sbjct: 1466 QSERWTGRKARRSVMAKAICSHF 1488
>gi|16804275|ref|NP_465760.1| shikimate 5-dehydrogenase [Listeria monocytogenes EGD-e]
gi|386051212|ref|YP_005969203.1| shikimate 5-dehydrogenase [Listeria monocytogenes FSL R2-561]
gi|404284734|ref|YP_006685631.1| shikimate 5-dehydrogenase [Listeria monocytogenes SLCC2372]
gi|405759288|ref|YP_006688564.1| shikimate 5-dehydrogenase [Listeria monocytogenes SLCC2479]
gi|16411706|emb|CAD00314.1| lmo2236 [Listeria monocytogenes EGD-e]
gi|346425058|gb|AEO26583.1| shikimate 5-dehydrogenase [Listeria monocytogenes FSL R2-561]
gi|404234236|emb|CBY55639.1| putative shikimate 5-dehydrogenase [Listeria monocytogenes
SLCC2372]
gi|404237170|emb|CBY58572.1| putative shikimate 5-dehydrogenase [Listeria monocytogenes
SLCC2479]
Length = 289
Score = 125 bits (314), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 89/301 (29%), Positives = 146/301 (48%), Gaps = 35/301 (11%)
Query: 231 EHINPDTKIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPML--VDDVKEFFRTYSGTD 288
I+ T++ GL+ P+ HSK PI++N +F+ + Y+ + V + + +
Sbjct: 3 NRISGTTRLLGLIGTPIDHSKSPIMYNYSFQKAGLDYAYLAFDTPIQKVADTIKAIKTFN 62
Query: 289 FAGFSVGIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDA 348
G +V +P K + D++ P A+ IGAVNTI+ DGKL G+ TD I+ + DA
Sbjct: 63 LRGANVTMPCKSEVLKHMDDLSPAARMIGAVNTIVNE--DGKLTGHITDGLGFIANLRDA 120
Query: 349 LRERQGINGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGAR-VIIFNRN---YERAK 404
+ +AGK ++GAGGA A+ GA+ + IFN Y++AK
Sbjct: 121 -------------SVDVAGKKMTIIGAGGAATAIQVQCALDGAKEITIFNIKDAFYDKAK 167
Query: 405 ALADAVSGEA----LHFEYLHEFFPEK-------GMILANASAIGMEPNSDQSPVPKEAL 453
++ E +H L++ EK IL NA+ +GM PN ++P+ ++
Sbjct: 168 QTVASIKQEVPNCIVHIYDLND--TEKLNAEITTSDILVNATLVGMHPNEHETPISDTSV 225
Query: 454 KAYELVF-DAVYTPRNTRLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRK 512
EL+ D +Y P+ T+LL +A G V G+ M + Q ++LFTG P ++
Sbjct: 226 FRKELIVADIIYNPKKTQLLLDAEAAGCKTVGGLGMLLWQGAEAYKLFTGKDMPVSEVKD 285
Query: 513 L 513
L
Sbjct: 286 L 286
>gi|418965062|ref|ZP_13516849.1| shikimate dehydrogenase [Streptococcus constellatus subsp.
constellatus SK53]
gi|383343895|gb|EID22067.1| shikimate dehydrogenase [Streptococcus constellatus subsp.
constellatus SK53]
Length = 284
Score = 125 bits (314), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 90/290 (31%), Positives = 144/290 (49%), Gaps = 35/290 (12%)
Query: 232 HINPDTKIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLV--DDVKEFFRTYSGTDF 289
I+ T++ +V+NP+ HS P +HN AF NG+Y+ + DD+K +
Sbjct: 2 KIDGYTRLAAVVANPIKHSISPFIHNAAFEQAGVNGVYLAWEISEDDLKTTVENIRRYNM 61
Query: 290 AGFSVGIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDAL 349
G ++ +P+K+ + DE+ P A+ IGAVNT++ + +GKL+GYNTD + ++ +
Sbjct: 62 FGINLSMPYKQAVIPFLDELTPAAQMIGAVNTVVNQ--NGKLIGYNTDGKGFFMSLPSFV 119
Query: 350 RERQGINGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGA-RVIIFNR--NYERA--- 403
I GK +++G+GGA A+ A GA + +F R ++ER
Sbjct: 120 ---------------IKGKKMLILGSGGAATAIIVQAVLEGADEIFVFTRKTSFERVLQQ 164
Query: 404 -KALADAVSGE--ALHFEYLHEFFPEK---GMILANASAIGMEPNSDQSPVPKEA-LKAY 456
K + A S + L E E EK +L N +++GM+ + SPVP L
Sbjct: 165 MKQIQQAASTKISVLPLEQ-RELLQEKLNASALLVNGTSLGMDEKT--SPVPSTIRLSKS 221
Query: 457 ELVFDAVYTPRNTRLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAP 506
LV D +Y P T L+ A + VV+G+ M + QA F+L+TG P
Sbjct: 222 LLVADVIYQPFETPFLKWAKKQNVQVVNGLGMLLYQAAEAFKLWTGKDMP 271
>gi|15606233|ref|NP_213611.1| shikimate 5-dehydrogenase [Aquifex aeolicus VF5]
gi|9087118|sp|O67049.1|AROE_AQUAE RecName: Full=Shikimate dehydrogenase
gi|2983425|gb|AAC07007.1| shikimate 5-dehydrogenase [Aquifex aeolicus VF5]
Length = 269
Score = 125 bits (314), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 78/276 (28%), Positives = 140/276 (50%), Gaps = 23/276 (8%)
Query: 233 INPDTKIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLVD--DVKEFFRTYSGTDFA 290
IN T+++G++ PV HS P+ N R+ N +Y+ ++ ++K+ F +
Sbjct: 2 INAQTQLYGVIGFPVKHSLSPVFQNALIRYAGLNAVYLAFEINPEELKKAFEGFKALKVK 61
Query: 291 GFSVGIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALR 350
G +V +P KE + D V AK IGAVNT+ + +GK GYNTD + +++ +
Sbjct: 62 GINVTVPFKEEIIPLLDYVEDTAKEIGAVNTV--KFENGKAYGYNTDWIGFLKSLKSLIP 119
Query: 351 ERQGINGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGARVIIFNRNYERAKALADAV 410
E + K +++GAGGA RA+ + GA+V ++NR E+A LA
Sbjct: 120 E-------------VKEKSILVLGAGGASRAVIYALVKEGAKVFLWNRTKEKAIKLAQKF 166
Query: 411 SGEALHFEYLHEFFPEKGMILANASAIGMEPNSDQSPVPKEALKAYELVFDAVYTPRNTR 470
E ++ E +K ++ N +++G++ + D + +K +V D +Y + T+
Sbjct: 167 PLEVVNSP---EEVIDKVQVIVNTTSVGLK-DKDPEIFNYDLIKKDHVVVDIIY--KETK 220
Query: 471 LLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAP 506
LL++A E GA + G+ M + Q + F+++ G P
Sbjct: 221 LLKKAKEKGAKLFDGLPMLLWQGIEAFKIWNGCEVP 256
>gi|386054491|ref|YP_005972049.1| shikimate 5-dehydrogenase [Listeria monocytogenes Finland 1998]
gi|346647142|gb|AEO39767.1| shikimate 5-dehydrogenase [Listeria monocytogenes Finland 1998]
Length = 289
Score = 125 bits (314), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 89/301 (29%), Positives = 146/301 (48%), Gaps = 35/301 (11%)
Query: 231 EHINPDTKIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLV--DDVKEFFRTYSGTD 288
I+ T++ GL+ P+ HSK PI++N +F+ + Y+ + V + + +
Sbjct: 3 NRISGTTRLLGLIGTPIDHSKSPIMYNYSFQKAGLDYAYLAFDTPTEKVTDAIKAIKTFN 62
Query: 289 FAGFSVGIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDA 348
G +V +P K + D++ P A+ IGAVNTI+ DGKL G+ TD I+ + DA
Sbjct: 63 LRGANVTMPCKSEVLKYMDDLSPAARMIGAVNTIVNE--DGKLTGHITDGLGFIANLRDA 120
Query: 349 LRERQGINGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGAR-VIIFNRN---YERAK 404
+ + GK ++GAGGA A+ GA+ + IFN Y++AK
Sbjct: 121 -------------SVDVTGKKMTIIGAGGAATAIQVQCALDGAKEITIFNIKDAFYDKAK 167
Query: 405 ALADAVSGEA----LHFEYLHEFFPEK-------GMILANASAIGMEPNSDQSPVPKEAL 453
A ++ E +H L++ EK IL NA+ +GM PN ++P+ ++
Sbjct: 168 QTAASIKQEVPNCIVHIYDLND--TEKLNAEITTSDILVNATLVGMHPNEHETPISDTSV 225
Query: 454 KAYELVF-DAVYTPRNTRLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRK 512
EL+ D +Y P+ T+LL +A G V G+ M + Q ++LFTG P ++
Sbjct: 226 FRKELIVADIIYNPKKTQLLLDAEAAGCKTVGGLGMLLWQGAEAYKLFTGKDMPVSEVKD 285
Query: 513 L 513
L
Sbjct: 286 L 286
>gi|158336295|ref|YP_001517469.1| shikimate 5-dehydrogenase [Acaryochloris marina MBIC11017]
gi|158306536|gb|ABW28153.1| shikimate 5-dehydrogenase, putative [Acaryochloris marina
MBIC11017]
Length = 292
Score = 125 bits (314), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 87/305 (28%), Positives = 140/305 (45%), Gaps = 44/305 (14%)
Query: 237 TKIFGLVSNPVGHSKGPILHNPAFR------HTRFNGIYVPMLVDD--VKEFFRTYSGTD 288
TK+ G++ +PV HS P++HN A + H +Y+P+ V + +
Sbjct: 8 TKLLGVMGHPVEHSLSPVMHNAALQALATQQHRFLEYVYIPLPVTAHALPAVVSSLRELG 67
Query: 289 FAGFSVGIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDA 348
GF++ IPHK+ + E +AK++GAVNT+ P D G NTD E +S ++
Sbjct: 68 CCGFNITIPHKQAIMPLLTETTAIAKAVGAVNTV--WPTDDGWAGTNTDVEGFLSPLQPL 125
Query: 349 LRERQGINGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGA-RVIIFNRNYERAKALA 407
R+ I ++G GGA RA+ G G +V I R + + L
Sbjct: 126 NRDWSTITPC-------------ILGCGGAARAVLAGCAQLGCLQVHIIGRQPAKLEHLK 172
Query: 408 DAVSGE-----ALH-FEYLHEFFPEKGMILANASAIGMEPNSDQSPV--------PKEAL 453
+ +H +E L P+ +++ N + +GM P+ SP+ PKEA+
Sbjct: 173 STCATTLSIDIQIHLWEDLAPLLPQAALLI-NTTPVGMSPHIQASPLSAVEIDQLPKEAI 231
Query: 454 KAYELVFDAVYTPRNTRLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRKL 513
V+D +YTP T LL++ G ++GVEM ++Q L+ AP D MR+
Sbjct: 232 -----VYDLIYTPNPTVLLKQTQASGRIAITGVEMLVQQGAAALSLWIDQPAPVDIMREA 286
Query: 514 VLEQF 518
+L F
Sbjct: 287 LLACF 291
>gi|218547527|ref|YP_002381318.1| shikimate 5-dehydrogenase [Escherichia fergusonii ATCC 35469]
gi|218355068|emb|CAQ87676.1| putative Quinate/shikimate dehydrogenase [Escherichia fergusonii
ATCC 35469]
Length = 287
Score = 125 bits (314), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 86/300 (28%), Positives = 144/300 (48%), Gaps = 30/300 (10%)
Query: 231 EHINPDTKIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLVDD--VKEFFRTYSGTD 288
E I T++ GL++ P+ HS P +HN AF H + +Y+ VD+ +K+ + +
Sbjct: 3 ERITGHTELIGLIATPIRHSMSPTMHNEAFAHLGLDYVYLAFEVDNQELKDVVQGFRALK 62
Query: 289 FAGFSVGIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDA 348
GF+V +P+K D + P A+ +GAVNT++ DG L G+ TD + A+++A
Sbjct: 63 LRGFNVSMPNKTEICQYLDNLSPAAQLVGAVNTVVND--DGILTGHITDGTGYMRALKEA 120
Query: 349 LRERQGINGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGARVI-IFNR------NYE 401
+ GK ++GAGGA A+ A G + I IFN+ N E
Sbjct: 121 -------------NIDVIGKKMTVLGAGGAATAICVQAALDGVKEISIFNKRDKFFPNAE 167
Query: 402 RAKALADAVSGEALHFEYLHEFFPEKG-----MILANASAIGMEPNSDQSPVPKEA-LKA 455
+ A + +H L + + ++L NA+ +GM+P Q +P + L+
Sbjct: 168 QTVAKIRNNTDCEIHLFDLDDHDKLRAEIDCSVLLTNATGVGMKPFEGQMLLPDASFLRP 227
Query: 456 YELVFDAVYTPRNTRLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRKLVL 515
+V D VY PR T LL A G ++G+ M + Q F ++TG P D+++ ++
Sbjct: 228 DLIVSDVVYNPRKTHLLEVAENSGCRTINGLGMMLWQGAAAFEIWTGKEMPVDYIKSILF 287
>gi|297571483|ref|YP_003697257.1| shikimate 5-dehydrogenase [Arcanobacterium haemolyticum DSM 20595]
gi|296931830|gb|ADH92638.1| shikimate 5-dehydrogenase [Arcanobacterium haemolyticum DSM 20595]
Length = 288
Score = 125 bits (314), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 88/287 (30%), Positives = 136/287 (47%), Gaps = 31/287 (10%)
Query: 240 FGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLV--DDVKEFFRTYSGTDFAGFSVGIP 297
FGL+ +P+ HS P++HN +FR + Y + V DV R++ AG +V +P
Sbjct: 5 FGLIGDPIEHSLSPLIHNTSFRALGIDATYSLLEVPDHDVPSAIRSFKNLGIAGINVTMP 64
Query: 298 HKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALRERQGING 357
+K + E+ P A+ +VNT+ R D +++G++TD + + DA GI+
Sbjct: 65 YKRAVLPALHELTPTAELAQSVNTVAFR--DNQIIGHSTDGLGMLKPLRDA-----GIDL 117
Query: 358 VASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGAR-VIIFNRN---YERAKALAD----- 408
H +++G+GGAG ++A A GAR V + NR ERA LA
Sbjct: 118 SHEH--------ILILGSGGAGTSVALAAAQSGARRVTLMNREGAGLERAHRLAARIREL 169
Query: 409 -----AVSGEALHFEYLHEFFPEKGMILANASAIGMEPNSDQSPVPKEALKAYELVFDAV 463
+ L E ++ N +A GM PN +PVP E L +V DAV
Sbjct: 170 PDESCTIGVVPLATTVETERCVRDATVILNCTAAGMNPNPHATPVPTEWLSNRHVVMDAV 229
Query: 464 YTPRNTRLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFM 510
YTPR T+ LR+A+ GA G+ M + QA L+ P +++
Sbjct: 230 YTPRVTQFLRDASVAGARTFDGLSMLVAQAALAEELWLECTMPTEYV 276
>gi|16801401|ref|NP_471669.1| shikimate 5-dehydrogenase [Listeria innocua Clip11262]
gi|16414861|emb|CAC97565.1| lin2338 [Listeria innocua Clip11262]
Length = 289
Score = 125 bits (314), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 94/293 (32%), Positives = 143/293 (48%), Gaps = 33/293 (11%)
Query: 231 EHINPDTKIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVP--MLVDDVKEFFRTYSGTD 288
+ I+ T++ L+ PV HSK PI++N +F+ + Y+ + V V + +
Sbjct: 3 KRISGSTRLLSLIGTPVDHSKSPIMYNYSFQKAGLDYAYLAFDIPVSKVADAIAAIKTFN 62
Query: 289 FAGFSVGIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDA 348
G +V +P K + DE+ P A+ IGAVNTII DGKL G+ TD S + D+
Sbjct: 63 LRGSNVTMPCKSEVLKYMDELSPAARMIGAVNTIINE--DGKLTGHITDGLGFASNLRDS 120
Query: 349 LRERQGINGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGARVI-IFNRN---YERAK 404
G++ +AGK ++GAGGA A+ GA+ I IFN YE+AK
Sbjct: 121 -----GVD--------VAGKKMTIIGAGGAATAIQVQCALDGAKEIAIFNIKDDFYEKAK 167
Query: 405 ALADAVSGEA----LHF------EYLHEFFPEKGMILANASAIGMEPNSDQSPVPKEALK 454
++ E +H LHE IL NA+ +GM P+ +++PV +
Sbjct: 168 QTIASIKQEVPDCIVHIYDLNDAAKLHEEIATSD-ILVNATLVGMHPHENETPVKDTTVF 226
Query: 455 AYEL-VFDAVYTPRNTRLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAP 506
+L V D VY P+ TRLL +A G+ + G+ M + Q ++LFTG P
Sbjct: 227 RKDLIVTDVVYNPKKTRLLLDAEAAGSKTIGGLGMLLWQGAEAYKLFTGKDMP 279
>gi|418018195|ref|ZP_12657751.1| shikimate 5-dehydrogenase [Streptococcus salivarius M18]
gi|345527044|gb|EGX30355.1| shikimate 5-dehydrogenase [Streptococcus salivarius M18]
Length = 285
Score = 125 bits (314), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 91/290 (31%), Positives = 145/290 (50%), Gaps = 31/290 (10%)
Query: 232 HINPDTKIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLV--DDVKEFFRTYSGTDF 289
I+ T++ +V+NP+ HS P +HN AF T+ NG+YV + D+ E D
Sbjct: 2 QIDGHTRLAAVVANPIKHSISPFIHNSAFEKTQVNGVYVAWEIPESDLAETVENIRRYDM 61
Query: 290 AGFSVGIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDAL 349
G ++ +P+KE + DE+ P A+ IGAVNT++ DG+L+G+NTD +++++
Sbjct: 62 FGINLSMPYKEAVIPFLDEISPAAQLIGAVNTVVN--CDGRLIGHNTDGFGFFASLKN-- 117
Query: 350 RERQGINGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGAR---VIIFNRNYERAK-A 405
SP + +L GAGGA +A+ A GA+ V + ++ ++AK +
Sbjct: 118 ------------FSPKDAHLMIL-GAGGAAKAIVTQAVLDGAKKVSVYVRPQSLDKAKES 164
Query: 406 LADAVSGEALHFEY-----LHEFFPEKGM--ILANASAIGMEPNSDQSPVPKEALKAYEL 458
+ H E+ L F E G +L NA+++GM+ S P + K L
Sbjct: 165 FKSLLEQRTCHLEFHALNDLKYFKEELGQADLLVNATSVGMDGASLPIPTDTKFPKGL-L 223
Query: 459 VFDAVYTPRNTRLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPED 508
V D +Y P T L A + G V+G+ M + QA G F+L+TG P D
Sbjct: 224 VADIIYQPFETPFLALARKQGIGAVNGLGMLLHQAAGAFKLWTGKDMPTD 273
>gi|313901109|ref|ZP_07834597.1| shikimate dehydrogenase [Clostridium sp. HGF2]
gi|346314397|ref|ZP_08855918.1| shikimate dehydrogenase [Erysipelotrichaceae bacterium 2_2_44A]
gi|373121312|ref|ZP_09535180.1| shikimate dehydrogenase [Erysipelotrichaceae bacterium 21_3]
gi|422327326|ref|ZP_16408353.1| shikimate dehydrogenase [Erysipelotrichaceae bacterium 6_1_45]
gi|312954067|gb|EFR35747.1| shikimate dehydrogenase [Clostridium sp. HGF2]
gi|345906755|gb|EGX76479.1| shikimate dehydrogenase [Erysipelotrichaceae bacterium 2_2_44A]
gi|371663631|gb|EHO28818.1| shikimate dehydrogenase [Erysipelotrichaceae bacterium 6_1_45]
gi|371665330|gb|EHO30495.1| shikimate dehydrogenase [Erysipelotrichaceae bacterium 21_3]
Length = 290
Score = 125 bits (314), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 96/303 (31%), Positives = 153/303 (50%), Gaps = 30/303 (9%)
Query: 231 EHINPDTKIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLV--DDVKEFFRTYSGTD 288
E I+ T++ GL++ P+ HSK P +HN AF + Y+ V +++++ + +
Sbjct: 3 ERISGHTELIGLIATPIRHSKSPKMHNEAFAKLGLDYAYLAFEVGNEELEDAVKGFKALK 62
Query: 289 FAGFSVGIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDA 348
G++V +P+K D + P A+ GAVNT++ +G L G+ TD + +++DA
Sbjct: 63 VRGYNVSMPNKTVIGQYLDHLSPAAELCGAVNTVVND--NGVLTGHITDGIGYMRSLKDA 120
Query: 349 LRERQGINGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGARVI-IFNRN---YERA- 403
GI P AGK + GAGGA A+ G + I IFNR +ERA
Sbjct: 121 -----GI-------EP-AGKKVTITGAGGAATAIEIQMALDGVKEISIFNRRDEFWERAE 167
Query: 404 ---KALADAVSGEALHFEYLH-EFFP---EKGMILANASAIGMEPNSDQSPVPKEA-LKA 455
K + + S +A F+ E F E + ANA+ +GM+P Q +P + L+
Sbjct: 168 QNVKNINEKTSCKATLFDLADTEAFKREIEDSYLFANATGVGMKPLEGQMVIPDASFLRK 227
Query: 456 YELVFDAVYTPRNTRLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRKLVL 515
+V D VY P T LLR A EVG ++G+ M + Q F L+TG P D+M++++
Sbjct: 228 DLIVTDVVYMPTETELLRVAKEVGCKTMNGLGMMLYQGAAAFELWTGKEMPIDYMKEILD 287
Query: 516 EQF 518
+F
Sbjct: 288 IKF 290
>gi|443652801|ref|ZP_21130917.1| shikimate 5-dehydrogenase [Microcystis aeruginosa DIANCHI905]
gi|159026345|emb|CAO86434.1| aroE [Microcystis aeruginosa PCC 7806]
gi|443334243|gb|ELS48766.1| shikimate 5-dehydrogenase [Microcystis aeruginosa DIANCHI905]
Length = 286
Score = 125 bits (313), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 83/298 (27%), Positives = 145/298 (48%), Gaps = 27/298 (9%)
Query: 233 INPDTKIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLV--DDVKEFFRTYSGTDFA 290
IN TK+ G++ +P+GH+ P +HN A N +Y+P+ + +++ S D
Sbjct: 4 INGKTKLLGVIGDPIGHTLSPPMHNAAIDALGLNYVYLPLPIAPENLATAIAGLSAIDLQ 63
Query: 291 GFSVGIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALR 350
GFSV IPHK + ++ A+ +GAVNT+ R + G NTD + ++ ++ +
Sbjct: 64 GFSVTIPHKLAIIPLLSQITEKARLVGAVNTVWRTETGWQ--GTNTDVDGFLAPLKSLDK 121
Query: 351 ERQGINGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRG-ARVIIFNRNYERAKALADA 409
+ +N V ++G GGA RA+ G + + RN ++ ++
Sbjct: 122 DWSRVNPV-------------ILGNGGAARAVVVACAQLGCGEIHVVGRNQKKLDPFKES 168
Query: 410 VSGEALH-FEYLHEFFPEKGMI-----LANASAIGMEPNSDQSPVPKEALK---AYELVF 460
+ +L+ +H + +GM+ L N++ IGM P +QSPV E L + + +
Sbjct: 169 WANTSLYDLLEVHGWDELEGMLPTTELLINSTPIGMSPQGEQSPVELELLDLLPSSAIAY 228
Query: 461 DAVYTPRNTRLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRKLVLEQF 518
D +Y PR T+ LR A G ++ G+EM + Q ++ G P MR+ +L+QF
Sbjct: 229 DLIYNPRPTKFLRLAQTRGIRIIDGLEMLVNQGAIALEIWLGQPVPVSVMREALLKQF 286
>gi|354582185|ref|ZP_09001087.1| shikimate 5-dehydrogenase [Paenibacillus lactis 154]
gi|353199584|gb|EHB65046.1| shikimate 5-dehydrogenase [Paenibacillus lactis 154]
Length = 284
Score = 125 bits (313), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 86/283 (30%), Positives = 135/283 (47%), Gaps = 22/283 (7%)
Query: 240 FGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLV--DDVKEFFRTYSGTDFAGFSVGIP 297
G++ +P+GHSK P +HN A G Y+P+ + + + + + F G +V IP
Sbjct: 13 LGVMGDPIGHSKSPAMHNAALAALNLQGAYIPLHIRPERLGDAIESVKTLGFRGVNVTIP 72
Query: 298 HKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALRERQGING 357
HK + D + A IGAVNTI+ +G+L GYNTD + ++++
Sbjct: 73 HKVEVMRYLDAIDEGAARIGAVNTIVND--NGRLTGYNTDGIGYVRSLKE---------- 120
Query: 358 VASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGARVI-IFNRNYERAKALADAVSGEA-L 415
+ GK ++GAGGA R + + I I NR ++AKALA A L
Sbjct: 121 --EACPDLKGKRIAVLGAGGAARGIIYALIGEQPESISIINRTEDKAKALAQEWGTMAEL 178
Query: 416 HF---EYLHEFFPEKGMILANASAIGMEPNSDQSPVPKEALKAYELVFDAVYTPRNTRLL 472
H E+ E + ++ N +++GM P + PV E + +V D +Y P T LL
Sbjct: 179 HGCGEEHAKEVL-SRAEVIINTTSVGMHPRISEMPVHPEWIPEGAVVSDLIYNPLKTELL 237
Query: 473 REAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRKLVL 515
++ + TV G+ MFI Q +TG AP + M++ VL
Sbjct: 238 LQSEQRNCTVHGGLGMFINQGAYALEYWTGLRAPVEAMKEAVL 280
>gi|448384460|ref|ZP_21563298.1| shikimate 5-dehydrogenase [Haloterrigena thermotolerans DSM 11522]
gi|445658526|gb|ELZ11344.1| shikimate 5-dehydrogenase [Haloterrigena thermotolerans DSM 11522]
Length = 267
Score = 125 bits (313), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 108/280 (38%), Positives = 140/280 (50%), Gaps = 25/280 (8%)
Query: 238 KIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLVDDVKEFFRTYSGTD---FAGFSV 294
++GL+ NPVGHS P +H A+ YV D G D AG +V
Sbjct: 2 DVYGLLGNPVGHSLSPPMHEAAYDELGLEARYV-TFEPDQDALAAAIDGADALGVAGLNV 60
Query: 295 GIPHKEPAVACCDEVHP--LAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALRER 352
IP K+ A + V P LA IGAVNTI G GYNTD A+ A+ D
Sbjct: 61 TIPFKQ---AALEIVAPEDLATRIGAVNTIDFSG-SGPPTGYNTDAVGALRALRD----- 111
Query: 353 QGINGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGARVIIFNRNYERAKALADAVSG 412
H + V++GAGGAGRA+AFG GA V I NR +A+ LA+AV
Sbjct: 112 --------HDVDLEDARAVVIGAGGAGRAVAFGLADAGATVAIANRTEPKARQLAEAVPR 163
Query: 413 EALHFEYLHEFFPEKGMILANASAIGMEPNSDQSPVPKEALKAYELVFDAVYTPRNTRLL 472
+ H E + +L NA+++GME D +PVP +AL V DAVY P TRLL
Sbjct: 164 ASGHGLADVERLLAEADVLVNATSVGME--EDATPVPADALHGDLAVLDAVYQPLETRLL 221
Query: 473 REAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRK 512
R+AAE GAT V G M + Q + F ++TG AP + M +
Sbjct: 222 RDAAEAGATTVDGAWMLLYQGVEAFEIWTGWDAPVEAMNE 261
>gi|389640335|ref|XP_003717800.1| pentafunctional AROM polypeptide [Magnaporthe oryzae 70-15]
gi|374095368|sp|A4RD09.2|ARO1_MAGO7 RecName: Full=Pentafunctional AROM polypeptide; Includes: RecName:
Full=3-dehydroquinate synthase; Short=DHQS; Includes:
RecName: Full=3-phosphoshikimate
1-carboxyvinyltransferase; AltName:
Full=5-enolpyruvylshikimate-3-phosphate synthase;
Short=EPSP synthase; Short=EPSPS; Includes: RecName:
Full=Shikimate kinase; Short=SK; Includes: RecName:
Full=3-dehydroquinate dehydratase;
Short=3-dehydroquinase; Includes: RecName: Full=Shikimate
dehydrogenase
gi|351640353|gb|EHA48216.1| pentafunctional AROM polypeptide [Magnaporthe oryzae 70-15]
gi|440466367|gb|ELQ35639.1| pentafunctional AROM polypeptide [Magnaporthe oryzae Y34]
gi|440487854|gb|ELQ67619.1| pentafunctional AROM polypeptide [Magnaporthe oryzae P131]
Length = 1590
Score = 125 bits (313), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 147/521 (28%), Positives = 226/521 (43%), Gaps = 76/521 (14%)
Query: 25 ASIEQAKVEGADLVELCID-----SMEFSHISEVDKLIQHPTLPAIVSYRLKSSRKSSDE 79
A+I +A V G+D VEL +D S EF + +V L +P I + R S +
Sbjct: 1081 ATIPKAVV-GSDAVELRVDLLQDHSPEFV-VRQVALLRSLCKMPIIFTVRTVSQGGRFPD 1138
Query: 80 ACKNTCLQVLRRALDLDVEFVEMDYEVASDPLMSEIIYSRSNTKIIVS--------SYLN 131
A L + R AL + VE+V+++ + D ++ + ++ T II S S+ N
Sbjct: 1139 ADHAGALALYRVALRMGVEYVDVEMTMPED-VIETVTKAKGYTSIIASHHDPKGTLSWRN 1197
Query: 132 GGGKPTTEK---LGDVIACMQATGADVMKLEIAVDSITDLAPVFEMLT-HCQVPLIALAV 187
G K GDVI + D D+ + L ML H P+IAL +
Sbjct: 1198 GAWMQYYNKALHYGDVIKLVGWCRTDE-------DNFSLLTFKTRMLAAHESTPIIALNM 1250
Query: 188 GSRGLISQLLGPKFGGFLV---YGSLGGKSVPGLPTLVSLKQVYQLEHINPDTKIFGLVS 244
G +G +S++L GF+ + +L + PG T ++Q L P K + L
Sbjct: 1251 GEQGKLSRVLN----GFMTPVTHAALPAAAAPGQLTAAEIRQALSLLSKIPKRKFY-LFG 1305
Query: 245 NPVGHSKGPILHNPAFRHTRFNGIYVPMLVDDVKEFFRTYSGTDFAGFSVGIPHKEPAVA 304
P+ S+ PILHN F+ T Y + D V E T +DF G SV IP K +
Sbjct: 1306 KPISKSRSPILHNTLFQQTGLPHTYSRLETDKVAEVETTIRASDFGGASVTIPLKLDIMP 1365
Query: 305 CCDEVHPLAKSIGAVNTIIRRPIDG---KLVGYNTDCESAISAIEDALRERQGINGVASH 361
DE+ AK+IGAVNTII P+ +L G NTD + ++ A G+ G
Sbjct: 1366 MLDEITDAAKTIGAVNTIIPVPVQAGKQRLRGDNTDWCGMVHSLRMA-----GVTG--KR 1418
Query: 362 TSPIAGKIFVLVGAGGAGRALAFGAKSRG-ARVIIFNRNYERAKALADAVSGE------- 413
P +G V+VG+GG RA F S G + + I RN + +A + E
Sbjct: 1419 ACPASG---VVVGSGGTTRAAIFALHSLGFSPIYIIARNATSVETIASSFPAEYDIRNLQ 1475
Query: 414 -ALHF-------EYLHEFFP-----EKGMILANASAIGMEPNSDQSPVPKEALKAYELVF 460
L + E + P ++G+++A S + + P+ A ++
Sbjct: 1476 GTLAYTEGMARPEVVISTIPATGDVDEGILMAVDSVLTL-------PMGTSNTGAARVLL 1528
Query: 461 DAVYTPRNTRLLREAAEVGATVVSGVEMFIRQALGQFRLFT 501
+ YTP T ++ A + G V G E+ Q QF+L+T
Sbjct: 1529 EMAYTPTFTNMMARAKDAGWGTVPGFEVLAAQGWFQFQLWT 1569
>gi|427711504|ref|YP_007060128.1| shikimate dehydrogenase [Synechococcus sp. PCC 6312]
gi|427375633|gb|AFY59585.1| shikimate dehydrogenase [Synechococcus sp. PCC 6312]
Length = 290
Score = 125 bits (313), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 84/289 (29%), Positives = 139/289 (48%), Gaps = 31/289 (10%)
Query: 237 TKIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLV--DDVKEFFRTYSGTDFAGFSV 294
T++ G++ PV HS P++HN A + +Y+P + D++ GF++
Sbjct: 7 TQLLGVIGYPVKHSLSPVIHNAALESLELDYVYLPFSIAPGDLETALSGMLVIGVQGFNI 66
Query: 295 GIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALRERQG 354
IPHK+ + C V PL +GAVNT+ R G +G NTD ++ + Q
Sbjct: 67 TIPHKQAIIPCLKSVSPLVDQVGAVNTVKRE--AGAWIGTNTDVAGFLAPL-------QA 117
Query: 355 INGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRG-ARVIIFNRNYERAKALADAVSGE 413
+N S+ + + L+G GGA RA+ G A + + R+ + +A A +
Sbjct: 118 LNLNWSNQTGL------LLGCGGAARAVVVACWQLGLAELTVSGRDLAKLQAF-QASWQD 170
Query: 414 ALHFEYLHEFFPEKGM--------ILANASAIGMEPNSDQSPV-PKE--ALKAYELVFDA 462
L +L + P +G ++ N++ +GM P + SP+ PK+ L A +++D
Sbjct: 171 ILPPGFL-KVVPWEGWAKELAAAALVVNSTPLGMAPEMNHSPLAPKDLDQLPASAIIYDL 229
Query: 463 VYTPRNTRLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMR 511
+YTP T+LL E G + G+EM I+Q F+ + G AP D MR
Sbjct: 230 IYTPNPTQLLAWGQERGLKTIDGLEMLIQQGAAAFQWWLGQPAPVDVMR 278
>gi|329114276|ref|ZP_08243038.1| Shikimate dehydrogenase [Acetobacter pomorum DM001]
gi|326696352|gb|EGE48031.1| Shikimate dehydrogenase [Acetobacter pomorum DM001]
Length = 288
Score = 125 bits (313), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 99/290 (34%), Positives = 145/290 (50%), Gaps = 25/290 (8%)
Query: 233 INPDTKIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLVDDVKEFFRTYSGTDFAGF 292
I K+ G++ PV HS+ P+LHN R +G YVP+ V+ F G AGF
Sbjct: 12 ITGKAKLAGVLGWPVAHSRSPVLHNYWLRRYEVDGAYVPLPVEP-DAFVAAVLGLQAAGF 70
Query: 293 ---SVGIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDAL 349
++ IPHKE A D + A+ GAVNT++ DGK+ GY+TD ++++E A
Sbjct: 71 RGANITIPHKEAAFKIADVLDHSAQRAGAVNTLVFED-DGKIHGYSTDGAGFVASMESA- 128
Query: 350 RERQGINGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGARVIIFNRNYERAKALADA 409
G N P ++ +L+GAGGA R++A + G RV + NR RA+ LA A
Sbjct: 129 ----GFN------LPEQAQV-LLLGAGGAARSVAAALQDCGLRVAVTNRTQGRAEELAKA 177
Query: 410 VSG-EALHFEYLHEFFPEKGMILANASAIGMEPNSDQSPVPKEALKAYELVF-DAVYTPR 467
+ G + L + + + L N +++GME D + P A A LV D VY PR
Sbjct: 178 LPGLDVLPWNMWEDRLGAYSL-LVNTTSLGMEGGPDAAFRPSLAHAAKALVVADIVYVPR 236
Query: 468 NTRLLREAAEVGATVVSGVEMFIRQALGQFRLFTG-----GLAPEDFMRK 512
T LL EA G + G+ M + QA F+ + G A EDF+++
Sbjct: 237 VTPLLAEAQSAGLRTLGGLGMLLHQARLGFQKWYGVNPEVDAATEDFVQE 286
>gi|383318782|ref|YP_005379623.1| shikimate 5-dehydrogenase [Methanocella conradii HZ254]
gi|379320152|gb|AFC99104.1| shikimate 5-dehydrogenase [Methanocella conradii HZ254]
Length = 268
Score = 125 bits (313), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 90/279 (32%), Positives = 133/279 (47%), Gaps = 25/279 (8%)
Query: 239 IFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLVDD--VKEFFRTYSGTDFAGFSVGI 296
++G++ +P+ HS P +HN AF+ + Y V + E F G +V +
Sbjct: 4 MYGVIGDPIAHSLSPAMHNAAFKALGMDCYYGAFHVKGRYLHEAVNGARALGFGGLNVTV 63
Query: 297 PHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALRERQGIN 356
PHKE + E A+ IGA NTI R YNTD AI+++ED +
Sbjct: 64 PHKEAVIRFV-EADAAAREIGAANTIDFRTNKA----YNTDAPGAIASLED--------S 110
Query: 357 GVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGARVIIFNRNYERAKALADAVSGEALH 416
GV + G+ +++GAGGA RA+ +G GA V I NR ++A LA +
Sbjct: 111 GV-----KVKGRSVLVLGAGGAARAVTYGLLKAGATVTIANRTAQKAADLAAYMREYGEV 165
Query: 417 FEYLHEFFPEK---GMILANASAIGMEPNSDQSPVPKEALKAYELVFDAVYTPRNTRLLR 473
F + EK I+ N + +GM D++ V + L + VFD VY P TRLL+
Sbjct: 166 FGTGMDNLREKVSISDIIVNTTTVGM--GQDETLVTADMLSDRQTVFDLVYRPVETRLLK 223
Query: 474 EAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRK 512
EA GA + G+ M +RQ F ++TG P D M +
Sbjct: 224 EARLAGARAIDGITMLVRQGALSFEIWTGVKPPIDVMER 262
>gi|425460344|ref|ZP_18839825.1| Shikimate dehydrogenase [Microcystis aeruginosa PCC 9808]
gi|389826973|emb|CCI22126.1| Shikimate dehydrogenase [Microcystis aeruginosa PCC 9808]
Length = 299
Score = 125 bits (313), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 83/298 (27%), Positives = 146/298 (48%), Gaps = 27/298 (9%)
Query: 233 INPDTKIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLV--DDVKEFFRTYSGTDFA 290
IN TK+ G++ +P+GH+ P +HN A N +Y+P+ + +++ S D
Sbjct: 17 INGKTKLLGVIGDPIGHTLSPPMHNAAIDALGLNYVYLPLPIAPENLATAIAGLSAIDLQ 76
Query: 291 GFSVGIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALR 350
GFSV IPHK + ++ AK +GAVNT+ R + G NTD + ++ ++ +
Sbjct: 77 GFSVTIPHKLAIIPLLSQITEKAKLVGAVNTVWRTETGWQ--GTNTDVDGFLAPLKSLDK 134
Query: 351 ERQGINGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRG-ARVIIFNRNYERAKALADA 409
+ +N V ++G GGA RA+ G ++ + RN ++ ++
Sbjct: 135 DWSRVNPV-------------ILGNGGAARAVVVACAQLGCGKIHVVGRNQKKLDPFKES 181
Query: 410 VSGEALH-FEYLHEFFPEKGMI-----LANASAIGMEPNSDQSPVPKEALK---AYELVF 460
+ +L+ +H + +G++ L N++ IGM P +QSPV E L + + +
Sbjct: 182 WANTSLYDLLEVHGWDELEGLLSTTELLINSTPIGMSPQGEQSPVELELLDLLPSSAIAY 241
Query: 461 DAVYTPRNTRLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRKLVLEQF 518
D +Y PR T+ LR A G ++ G+EM + Q ++ G P MR+ +L+QF
Sbjct: 242 DLIYNPRPTKFLRLAQTRGIRIIDGLEMLVNQGAIALEIWLGQPVPVSVMREALLKQF 299
>gi|423099141|ref|ZP_17086849.1| putative shikimate dehydrogenase [Listeria innocua ATCC 33091]
gi|370794376|gb|EHN62151.1| putative shikimate dehydrogenase [Listeria innocua ATCC 33091]
Length = 291
Score = 124 bits (312), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 94/293 (32%), Positives = 143/293 (48%), Gaps = 33/293 (11%)
Query: 231 EHINPDTKIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVP--MLVDDVKEFFRTYSGTD 288
+ I+ T++ L+ PV HSK PI++N +F+ + Y+ + V V + +
Sbjct: 5 KRISGSTRLLSLIGTPVDHSKSPIMYNYSFQKAGLDYAYLAFDIPVSKVADAIAAIKTFN 64
Query: 289 FAGFSVGIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDA 348
G +V +P K + DE+ P A+ IGAVNTII DGKL G+ TD S + D+
Sbjct: 65 LRGSNVTMPCKSEVLKYMDELSPAARMIGAVNTIINE--DGKLTGHITDGLGFASNLRDS 122
Query: 349 LRERQGINGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGARVI-IFNRN---YERAK 404
G++ +AGK ++GAGGA A+ GA+ I IFN YE+AK
Sbjct: 123 -----GVD--------MAGKKMTIIGAGGAATAIQVQCALDGAKEIAIFNIKDDFYEKAK 169
Query: 405 ALADAVSGEA----LHF------EYLHEFFPEKGMILANASAIGMEPNSDQSPVPKEALK 454
++ E +H LHE IL NA+ +GM P+ +++PV +
Sbjct: 170 QTIASIKQEVPDCIVHIYDLNDAAKLHEEIATSD-ILVNATLVGMHPHENETPVKDTTVF 228
Query: 455 AYEL-VFDAVYTPRNTRLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAP 506
+L V D VY P+ TRLL +A G+ + G+ M + Q ++LFTG P
Sbjct: 229 RKDLIVTDVVYNPKKTRLLLDAEAAGSKTIGGLGMLLWQGAEAYKLFTGKDMP 281
>gi|332799771|ref|YP_004461270.1| shikimate dehydrogenase [Tepidanaerobacter acetatoxydans Re1]
gi|332697506|gb|AEE91963.1| Shikimate dehydrogenase [Tepidanaerobacter acetatoxydans Re1]
Length = 290
Score = 124 bits (312), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 82/283 (28%), Positives = 149/283 (52%), Gaps = 30/283 (10%)
Query: 237 TKIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLVD--DVKEFFRTYSGTDFAGFSV 294
T+I+ ++ P+ HS PI+HN F + + I++ + D ++K D G S+
Sbjct: 11 TQIYAILGTPISHSLSPIIHNTLFCYNNLDKIFLALNTDTNNLKLAIDAVRSFDIKGLSI 70
Query: 295 GIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALRERQG 354
+P KE V CD++ P A+ IGAVN I+ + +G LVGYNTDC +I
Sbjct: 71 TMPLKEEVVKYCDKLLPEAEIIGAVNCILNK--NGTLVGYNTDCTGFSMSI--------- 119
Query: 355 INGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGAR-VIIFNRNYERAKALADAVSG- 412
IN V + ++F+ GAGG G+A+A +G + + + NR+ ++A+ L +
Sbjct: 120 INKVGV----LPDRVFIF-GAGGVGKAIAAELILKGVKKLFLTNRSIDKAENLRKRLEHL 174
Query: 413 -----EALHFEY--LHEFFPEKGMILANASAIGMEPNSDQSP-VPKEALKAYELVFDAVY 464
E + ++ +E E +I+ N +++GM N + + VP E +++ L+++ +Y
Sbjct: 175 SKTEVEIIPWDKKSWNEGIKESDLII-NCTSLGMYNNGNLADIVPWELVRSNTLIYETIY 233
Query: 465 TPRNTRLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPE 507
PR T L+ +A + V+ G+ + + QA ++++T GL P+
Sbjct: 234 EPRETTLISKARSLNLEVIEGINLLVYQAAAAYKIWT-GLEPD 275
>gi|440754316|ref|ZP_20933518.1| shikimate 5-dehydrogenase [Microcystis aeruginosa TAIHU98]
gi|440174522|gb|ELP53891.1| shikimate 5-dehydrogenase [Microcystis aeruginosa TAIHU98]
Length = 286
Score = 124 bits (312), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 82/298 (27%), Positives = 146/298 (48%), Gaps = 27/298 (9%)
Query: 233 INPDTKIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLV--DDVKEFFRTYSGTDFA 290
IN TK+ G++ +P+GH+ P++HN A N +Y+P+ + +++ +S D
Sbjct: 4 INGKTKLLGVIGDPIGHTLSPLMHNAAIDALGLNYVYLPLPIAPENLATAIAGFSAIDLE 63
Query: 291 GFSVGIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALR 350
GFSV IPHK + ++ A+ +GAVNT+ R + G NTD + ++ ++ +
Sbjct: 64 GFSVTIPHKLAIIPLLSQITEKARLVGAVNTVWRTKTGWQ--GTNTDVDGFLAPLKSLDK 121
Query: 351 ERQGINGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRG-ARVIIFNRNYERAKALADA 409
+ +N V ++G GGA RA+ G + + RN ++ ++
Sbjct: 122 DWSQVNPV-------------ILGNGGAARAVVVACAQLGCGEIHVVGRNQKKLDPFKES 168
Query: 410 VSGEALH-FEYLHEFFPEKGMI-----LANASAIGMEPNSDQSPVPKEALKAYE---LVF 460
+ +L+ +H + +G++ L N++ IGM P +QSPV E L + +
Sbjct: 169 WANTSLYDLLEVHSWDELEGLLCTTELLINSTPIGMSPQGEQSPVELELLDLLPPSAIAY 228
Query: 461 DAVYTPRNTRLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRKLVLEQF 518
D +Y PR T+ LR A G ++ G+EM + Q ++ G P MR+ +L+QF
Sbjct: 229 DLIYNPRPTKFLRLAQTRGIRIIDGLEMLVNQGAIALEIWLGQPVPVSVMREALLKQF 286
>gi|119491415|ref|ZP_01623434.1| shikimate 5-dehydrogenase [Lyngbya sp. PCC 8106]
gi|119453410|gb|EAW34573.1| shikimate 5-dehydrogenase [Lyngbya sp. PCC 8106]
Length = 287
Score = 124 bits (312), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 81/292 (27%), Positives = 142/292 (48%), Gaps = 29/292 (9%)
Query: 233 INPDTKIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLVD--DVKEFFRTYSGTDFA 290
I TK+ G++ +P+ HS P++HN A R + +Y+P + D+ ++
Sbjct: 2 IQGTTKLLGVIGDPIEHSLSPVMHNAAIAEMRVDYVYLPFPIQSTDLDAALAGFAAIGVQ 61
Query: 291 GFSVGIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALR 350
GF+V IPHK+ ++ +V +A+++GAVNT+ R + G NTD ++ +
Sbjct: 62 GFNVTIPHKQAILSRLSKVSKIAEAVGAVNTVWRTSEGWE--GTNTDVAGFLAPL----- 114
Query: 351 ERQGINGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRG-ARVIIFNRNYERAKALADA 409
Q IN S K V++G GGA RA+ G G + + RN ++ + +
Sbjct: 115 --QNINTFWSK------KTAVILGNGGASRAVVAGCVELGITEIYVIGRNLQKLEVFQQS 166
Query: 410 -------VSGEALHFEYLHEFFPEKGMILANASAIGMEPNSDQSPVPK---EALKAYELV 459
+S + +E L E + + L N + +GM P+ + SPV + + LK+ +
Sbjct: 167 WLESPLSLSLQIQTWENLTEIIHQADL-LVNTTPVGMYPHVENSPVTEAVMDRLKSDAIA 225
Query: 460 FDAVYTPRNTRLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMR 511
+D +YTP T+ L A GA ++ G+EM ++Q +L+ P + MR
Sbjct: 226 YDLIYTPNPTQFLSLAKAKGAIIIDGLEMLVQQGASALQLWLKQSVPVEVMR 277
>gi|114762192|ref|ZP_01441660.1| shikimate 5-dehydrogenase [Pelagibaca bermudensis HTCC2601]
gi|114545216|gb|EAU48219.1| shikimate 5-dehydrogenase [Roseovarius sp. HTCC2601]
Length = 276
Score = 124 bits (312), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 98/273 (35%), Positives = 133/273 (48%), Gaps = 19/273 (6%)
Query: 236 DTKI--FGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLV--DDVKEFFRTYSGTDFAG 291
DT+I G++ +PV HS+ P+LH + G Y+PM + D ++ FRT F G
Sbjct: 3 DTRIPLAGVIGHPVAHSRSPLLHGHWLKTYGLQGHYIPMDIAPDKLETAFRTLPDLGFVG 62
Query: 292 FSVGIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALRE 351
+V IPHKE + D V A IGA NTII R DGK+ NTD I +
Sbjct: 63 VNVTIPHKEKVMEIADLVSDRATLIGAANTIIFRK-DGKIHADNTDGYGFIENL------ 115
Query: 352 RQGINGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGA-RVIIFNRNYERAKALADAV 410
RQG G P AG VL GAGGA RA+ G + I NR RA+ L +
Sbjct: 116 RQGAPG----WDPQAGPAMVL-GAGGAARAVIASLLEVGVPEIRISNRTRNRAEQLREEF 170
Query: 411 SGEALHFEYLHEFFP-EKGMILANASAIGMEPNSDQSPVPKEALKAYELVFDAVYTPRNT 469
E++ + ++ N++++GM + VP + L+ +V D VYTP T
Sbjct: 171 GARIRVVEWVQAGNAMDDAALVVNSTSLGMV-GKQELRVPLDGLQPGTVVTDLVYTPLET 229
Query: 470 RLLREAAEVGATVVSGVEMFIRQALGQFRLFTG 502
RLLR A E G T V G+ M I QA+ F + G
Sbjct: 230 RLLRVAREQGCTCVDGLGMLIHQAVPGFERWFG 262
>gi|170096704|ref|XP_001879572.1| predicted protein [Laccaria bicolor S238N-H82]
gi|327507659|sp|B0D6H2.1|ARO1_LACBS RecName: Full=Pentafunctional AROM polypeptide; Includes: RecName:
Full=3-dehydroquinate synthase; Short=DHQS; Includes:
RecName: Full=3-phosphoshikimate
1-carboxyvinyltransferase; AltName:
Full=5-enolpyruvylshikimate-3-phosphate synthase;
Short=EPSP synthase; Short=EPSPS; Includes: RecName:
Full=Shikimate kinase; Short=SK; Includes: RecName:
Full=3-dehydroquinate dehydratase;
Short=3-dehydroquinase; Includes: RecName: Full=Shikimate
dehydrogenase
gi|164645940|gb|EDR10187.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 1606
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 136/522 (26%), Positives = 234/522 (44%), Gaps = 61/522 (11%)
Query: 33 EGADLVELCID---------SMEFS------HISEVDKLIQHPTLPAIVSYRLKSSRKSS 77
+G D +EL +D S+E+S S+V L + +LP + + R +S S
Sbjct: 1088 QGVDAIELRVDLLRASKDYDSIEYSIPTLAYVSSQVAALRRVTSLPIVFTVRTQSQGGSF 1147
Query: 78 DEACKNTCLQVLRRALDLDVEFVEMDYEVASDPLMSEIIYSRSNTKIIVSSYLNGGGK-- 135
+A + +++L+ AL L VE+V+++ + S+ + E++ + ++ +I S + G
Sbjct: 1148 PDAAEKEAVELLKLALRLGVEYVDVEISL-SEKKIKELVSLKGSSHMIASWHDWSGNMIW 1206
Query: 136 --PTTEKLGDVIACMQATGADVMKLEIAVDSITDLAPVFEMLTHCQV-----PLIALAVG 188
P ++ D A D++K+ +SI D ++ ++ P IA+ +G
Sbjct: 1207 DGPVVKEKYDAAARF----GDIIKIVGKANSIQDNFTLYNFVSKVNSTAGSKPFIAINMG 1262
Query: 189 SRGLISQLLGPKFGGFLVYGSLGGKSVPGLPTLVSLKQVYQLEHINPDTKIFGLVSNPVG 248
G +S++L + + L K+ PG + ++ L + P + F L P+
Sbjct: 1263 LEGQMSRVLNSTLSP-VSHPLLPSKAAPGQLSFKQIQNALHLLGLLPAQR-FYLFGTPIA 1320
Query: 249 HSKGPILHNPAFRHTRFNGIYVPMLVDDVKEFFRTYSG-TDFAGFSVGIPHKEPAVACCD 307
HS P LHN F Y + +V E + G + F G SV IP+K + D
Sbjct: 1321 HSMSPTLHNTGFEILGLPHHYELLETKEVAEEIKIAIGDSAFGGASVTIPYKLDVIPLLD 1380
Query: 308 EVHPLAKSIGAVNTIIRRPI-DGK-LVGYNTDCESAISAIEDALRERQGINGVASHTSPI 365
++ P A++IGAVNTII R G+ LVG NTD + I + L + PI
Sbjct: 1381 KLSPAAEAIGAVNTIIPRTTGSGRMLVGDNTDWLGIKACITEQLSSK-----------PI 1429
Query: 366 AGKIFVLVGAGGAGRALAFGAKSRG-ARVIIFNRNYERAKALADAVSGEALH-FEYLHEF 423
+ ++GAGG RA + + + ++NR +A LA A +H E L +
Sbjct: 1430 HAAL--VIGAGGTARAAIYALSALNVGDIYLYNRTTSKAYELAHAFPHAPVHVLEQLGQ- 1486
Query: 424 FPEKG----MILAN--ASAIGMEPNSDQSPVPKEALKAYE---LVFDAVYTPRNTRLLRE 474
+P +I++ ASA E + +P + + +V D Y P T LLR
Sbjct: 1487 WPNGAVPPCVIVSTVPASATTTEEETSGILLPSKLFDYRDGPAVVIDMAYKPAETPLLRL 1546
Query: 475 AAEVG--ATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRKLV 514
A G V G+E+ + Q QF ++TG P++ + K +
Sbjct: 1547 AKTAGDNWATVPGLEVLLEQGYVQFEMWTGRRCPKELVAKWL 1588
>gi|336437054|ref|ZP_08616763.1| shikimate 5-dehydrogenase [Lachnospiraceae bacterium 1_4_56FAA]
gi|336006188|gb|EGN36224.1| shikimate 5-dehydrogenase [Lachnospiraceae bacterium 1_4_56FAA]
Length = 288
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 89/298 (29%), Positives = 148/298 (49%), Gaps = 32/298 (10%)
Query: 231 EHINPDTKIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLV--DDVKEFFRTYSGTD 288
E I T++ GL+ +PV HS P++HN AF+ + Y+ V D ++ +
Sbjct: 3 ERITGKTRLTGLLGSPVTHSISPMMHNEAFKELGLDYAYLAFDVGTDKLEAAVEGLKVLN 62
Query: 289 FAGFSVGIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDA 348
GF+V +P K + CD + P A+ IGAVNT++ DG L GY TD + +++DA
Sbjct: 63 VRGFNVTMPDKNLMCSLCDHLSPAAEIIGAVNTVVNE--DGVLTGYTTDGIGYMMSVKDA 120
Query: 349 LRERQGINGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRG-ARVIIFNRN---YERAK 404
+ + GK + GAGGAG ++ A G A + +FNR +ERA+
Sbjct: 121 GYD-------------VIGKKMTIFGAGGAGTSILVQAALDGVAEITVFNRRTPFFERAE 167
Query: 405 ALADAVSGEALHFEYLHEFFPE--------KGMILANASAIGMEPNSDQSPVPKEA--LK 454
+ + + L+++ E + +L NA+++GM PN ++ + K+A L
Sbjct: 168 RIIGRLKEQTGCRIRLYDYDDESILRREIGESALLTNATSLGMAPNV-ETCILKDASMLH 226
Query: 455 AYELVFDAVYTPRNTRLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRK 512
+V D +Y P+ TRLLR E G +G+ M + Q FR++TG P + +++
Sbjct: 227 PGVVVSDMIYNPKETRLLRMVREAGCRTFNGMYMLLYQGAEAFRIWTGQQMPVEHIKE 284
>gi|296133259|ref|YP_003640506.1| shikimate 5-dehydrogenase [Thermincola potens JR]
gi|296031837|gb|ADG82605.1| shikimate 5-dehydrogenase [Thermincola potens JR]
Length = 293
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 89/297 (29%), Positives = 137/297 (46%), Gaps = 21/297 (7%)
Query: 229 QLEHINPDTKIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLV--DDVKEFFRTYSG 286
+++ I T + G+ PV HS P++HN AF+ + +YVP V + + E
Sbjct: 4 KIQRITGKTGVIGIFGFPVEHSFSPVMHNAAFQAGGLDYVYVPFEVPPERLAEAVSAIRA 63
Query: 287 TDFAGFSVGIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIE 346
G +V IPHKE V D + A+ IGAVNTI+R +L GYNTD + ++E
Sbjct: 64 LKLRGVNVTIPHKERVVQYLDSLSEEARLIGAVNTIVRS--GDELKGYNTDAAGFLRSLE 121
Query: 347 DALRERQGINGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGARVIIFNRNYERAKAL 406
+ QG N + A + V + GA R +++ N + +A+ +
Sbjct: 122 EKKVAVQGANVLLLGAGGAARAVAVQLALAGARRV----------GIVVRNSGWRKAEGI 171
Query: 407 ADAVSGEALH------FEYLHEFFPEKGMILANASAIGMEPN-SDQSPVPKEALKAYELV 459
A+ V+G + FE + EKG I+ N + +GM PN + P + + A +V
Sbjct: 172 AEIVAGHSCAKSTVALFENAQDLIAEKGNIIINCTPVGMHPNVMEMPPFKLDTIPADSVV 231
Query: 460 FDAVYTPRNTRLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRKLVLE 516
D +Y P T L+ A G VSG M + Q + L+T AP D MR + E
Sbjct: 232 CDLIYNPAETLFLKTAKARGLKTVSGSGMLLYQGTLAYELWTRQQAPVDIMRTALEE 288
>gi|387761673|ref|YP_006068650.1| shikimate 5-dehydrogenase [Streptococcus salivarius 57.I]
gi|339292440|gb|AEJ53787.1| shikimate 5-dehydrogenase [Streptococcus salivarius 57.I]
Length = 285
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 90/290 (31%), Positives = 148/290 (51%), Gaps = 31/290 (10%)
Query: 232 HINPDTKIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLV--DDVKEFFRTYSGTDF 289
I+ T++ +V+NP+ HS P +HN AF T+ NG+YV + D+ E +
Sbjct: 2 QIDGHTRLAAVVANPIKHSISPFIHNSAFEKTQVNGVYVAWEIPESDLAETVENIRRYNM 61
Query: 290 AGFSVGIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDAL 349
G ++ +P+KE + DE+ P A+ IGAVNT++ R DG L+G+NTD +++++
Sbjct: 62 FGINLSMPYKEAVIPFLDEISPAAQLIGAVNTVVNR--DGHLIGHNTDGFGFFASLKN-- 117
Query: 350 RERQGINGVASHTSPIAGKIFVLVGAGGAGRALAFGA---KSRGARVIIFNRNYERAKAL 406
SP + +L GAGGA +A+ A ++ V + ++ ++AK
Sbjct: 118 ------------FSPRDAHLTIL-GAGGAAKAIVTQAVLDDAKKVSVYVRPQSLDKAKES 164
Query: 407 ADAVSGEA---LHFEYLH--EFFPE---KGMILANASAIGMEPNSDQSPVPKEALKAYEL 458
++ +A L F L+ E+F E + +L NA+++GM+ S P + K L
Sbjct: 165 FKSLLEQATCQLEFHALNDLEYFQEELGQADLLVNATSVGMDGESLPIPTDTKFPKGL-L 223
Query: 459 VFDAVYTPRNTRLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPED 508
V D +Y P T L A + G V+G+ M + QA G F+L+TG P D
Sbjct: 224 VADIIYQPFETPFLALARKQGIEAVNGLGMLLHQAAGAFKLWTGKDMPTD 273
>gi|144899674|emb|CAM76538.1| Quinate/Shikimate 5-dehydrogenase [Magnetospirillum gryphiswaldense
MSR-1]
Length = 278
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 96/272 (35%), Positives = 139/272 (51%), Gaps = 24/272 (8%)
Query: 238 KIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLV--DDVKEFFRTYSGTDFAGFSVG 295
K+ G++ PVGHS+ P LH +G YVP+ V +D FR FAG +V
Sbjct: 8 KLAGVLGWPVGHSRSPRLHGYWLERLGIDGAYVPLPVRPEDFASVFRALPKMGFAGANVT 67
Query: 296 IPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALRERQGI 355
+PHKE A+ DEV PLAK IGAVNT++ R DG ++G NTD A +++ L
Sbjct: 68 VPHKEQALILADEVEPLAKRIGAVNTLVVRE-DGSILGLNTD---AFGFMQNLLETHPAS 123
Query: 356 NGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGA-RVIIFNRNYERAKALADAVSGEA 414
G + + V++GAGGA RA+ G + + NR+ ERA+ LA + G
Sbjct: 124 LGYLNRPA-------VVLGAGGAARAVIAALADAGVPEIRLVNRSLERAEKLAAEIGGP- 175
Query: 415 LHFEYLHEFFPEKGMILANASAIGM--EP--NSDQSPVPKEALKAYELVFDAVYTPRNTR 470
+ + +L N +++GM +P + D S +P++A +V D VY PR T
Sbjct: 176 IRVQQWDRLDLAGAGLLVNTTSLGMTGQPPLDLDLSALPQDA-----VVNDIVYAPRVTD 230
Query: 471 LLREAAEVGATVVSGVEMFIRQALGQFRLFTG 502
LL A G VV G+ M + QA+ F L+ G
Sbjct: 231 LLLRAQARGNPVVDGLGMLLWQAVRGFSLWFG 262
>gi|307155072|ref|YP_003890456.1| shikimate 5-dehydrogenase [Cyanothece sp. PCC 7822]
gi|306985300|gb|ADN17181.1| shikimate 5-dehydrogenase [Cyanothece sp. PCC 7822]
Length = 293
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 85/279 (30%), Positives = 136/279 (48%), Gaps = 31/279 (11%)
Query: 237 TKIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLV--DDVKEFFRTYSGTDFAGFSV 294
TK+ G++ +P+ HS P++HN A + +YVP L+ +++K + GFS+
Sbjct: 8 TKLLGVIGDPIEHSLSPVMHNAAITQLGADFVYVPFLIKPENLKTALAGFEAIGVVGFSI 67
Query: 295 GIPHKEPAVACCDEVH--PLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALRER 352
IPHK+ + H AK +GAVNT+ ++ D + G NTD E +S +
Sbjct: 68 TIPHKQAIIPLLSPSHISTTAKLVGAVNTLYKK--DNEWHGTNTDLEGFLSPL------- 118
Query: 353 QGINGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRG-ARVIIFNRNYERA----KALA 407
Q I S +P V++G GGA RA+ G G + + RN ++ ++ A
Sbjct: 119 QNITLPWSQVTP------VILGNGGAARAVVVGCHQLGCPEISVVGRNKQKLDDFYQSWA 172
Query: 408 DAVSGEALHFEYLHEFFP---EKGMILANASAIGMEPNSDQSPV---PKEALKAYELVFD 461
+ EAL +L E P K L NA+ IGM+ S SPV E L A + +D
Sbjct: 173 NTPIQEALRV-HLWEDLPGLVSKTQFLINATPIGMDKQSHLSPVEVTTLEKLPAGTIAYD 231
Query: 462 AVYTPRNTRLLREAAEVGATVVSGVEMFIRQALGQFRLF 500
+Y P T L++A + GA ++ G+EM ++Q ++
Sbjct: 232 LIYKPNPTLFLKQAQQQGAIIIDGLEMLVQQGASALSIW 270
>gi|449109291|ref|ZP_21745927.1| shikimate 5-dehydrogenase [Treponema denticola ATCC 33520]
gi|448959099|gb|EMB39821.1| shikimate 5-dehydrogenase [Treponema denticola ATCC 33520]
Length = 493
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 128/517 (24%), Positives = 219/517 (42%), Gaps = 51/517 (9%)
Query: 8 SLLVCTQLECETTEEMQASIEQAKVEGADLVELCIDSMEFSHISEVDKLIQHPTLPAIVS 67
S VC L +T E+ +++E+ K + D+ EL +D + S I + + +P I++
Sbjct: 2 STKVCLVLTEKTIEKNLSALEKYK-KFIDIAELRVDYLNQSEILYLRNFPERAGIPCILT 60
Query: 68 YRLKSS--RKSSDEACKNTCLQVLRRAL-----DLDVEFVEMDYEVASDPLMSEIIYSRS 120
R KS + E + T + R L D F +D E D E
Sbjct: 61 VRRKSDGGNFTGGEGARMT---IFARGLAFANSDPIKNFSYIDLESDFDSSGIEEAARAF 117
Query: 121 NTKIIVSSYLNGGGKPTTEKLGDVIACMQATGADVMKLEIAVDSITDLAPVFE--MLTHC 178
+ KII S + K + + + + D+ KL + + D++ +F+ L
Sbjct: 118 DIKIIRSLH----SKVPVKNIVKTVEGLSRFETDIPKLAFTANCLNDVSELFKASKLIKN 173
Query: 179 QVPLIALAVGSRGLISQLLGPKFGGFLVYGSL-----GGKSVPGLPTLVSLKQVYQLEHI 233
Q ++++ +G GL S++L K +VY K L +L+++Y I
Sbjct: 174 QEYILSV-MGPYGLSSRILSNKLNSQIVYTFTPEYIKKNKLEQALIDPETLEELYGFSKI 232
Query: 234 NPDTKIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLVDDVKEFFRTYSGTDFAGFS 293
+ +T ++G++ V S P +HN F+ N +Y+P+ KE + G S
Sbjct: 233 DEETSLYGVIGKDVNTSLSPQIHNKGFKRKNLNSVYIPISAVSSKEALDFANLLKIKGLS 292
Query: 294 VGIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALRE-- 351
V P K + + + +K IGAVNT++ + K GYNTD + A+ + L E
Sbjct: 293 VTAPFKSEIIPLINSISEASKFIGAVNTLVSE--NKKWFGYNTDVDGFQQALMEFLNEKD 350
Query: 352 -RQGINGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGARVIIFNRNYERAKALADAV 410
R+ + V+ G + IFNR E+AK +A+
Sbjct: 351 LRKYKVAIIGAGGAARAVAEVISSLHG--------------KACIFNRTAEKAKNIAEKY 396
Query: 411 SGEA-----LHFEYLHEFFPEKGMILANASAIGMEPNSDQSPVPKEALKAYELVFDAVYT 465
+ ++ + LH F +I+ +A GMEP+ D P+ E VF+ +Y
Sbjct: 397 KFKWALLDPINIKQLHAF---SELIIQTTNA-GMEPDIDMDPLNFYTFTGKEKVFELIYR 452
Query: 466 PRNTRLLREAAEVGATVVSGVEMFIRQALGQFRLFTG 502
P T++L+ A G V +G +M QA QF++F G
Sbjct: 453 PETTKMLKRARTAGCQVCNGYKMLEYQAYHQFKVFAG 489
>gi|56698701|ref|YP_169079.1| shikimate 5-dehydrogenase [Ruegeria pomeroyi DSS-3]
gi|56680438|gb|AAV97104.1| shikimate 5-dehydrogenase [Ruegeria pomeroyi DSS-3]
Length = 277
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 89/266 (33%), Positives = 130/266 (48%), Gaps = 17/266 (6%)
Query: 241 GLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLV--DDVKEFFRTYSGTDFAGFSVGIPH 298
G++ +P+ HSK P LH + NG Y+PM V D+ + RT F G ++ IPH
Sbjct: 10 GVIGHPISHSKSPRLHGHWLKTYGINGHYIPMDVAPQDLAQVVRTLPKAGFVGVNITIPH 69
Query: 299 KEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALRERQGINGV 358
KE ++ D++ A IGAVNT+I R DG+++ NTD + + R G G
Sbjct: 70 KEAVMSVADQITDRATLIGAVNTLIFRE-DGRILADNTDGYGFMENL------RAGAPGW 122
Query: 359 ASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGA-RVIIFNRNYERAKALADAVSGEALHF 417
+ P V+ GAGGA RA+ G VI+ NR RA L D
Sbjct: 123 DPKSGPA-----VVFGAGGAARAVISALAEAGVPEVIVTNRTRVRADKLKDDFGQRVTVA 177
Query: 418 EYLHE-FFPEKGMILANASAIGMEPNSDQSPVPKEALKAYELVFDAVYTPRNTRLLREAA 476
+++ E ++ N +++GM + VP + L+A +V D VY P TRLL EA
Sbjct: 178 DWVQAGNVIEDARLVVNTTSLGMIGKPELR-VPLDGLRADAVVTDLVYAPLKTRLLAEAE 236
Query: 477 EVGATVVSGVEMFIRQALGQFRLFTG 502
E+G T V G+ M + QA+ F + G
Sbjct: 237 EMGCTTVDGLGMLLHQAVPGFERWFG 262
>gi|170078337|ref|YP_001734975.1| shikimate 5-dehydrogenase [Synechococcus sp. PCC 7002]
gi|169886006|gb|ACA99719.1| shikimate dehydrogenase [Synechococcus sp. PCC 7002]
Length = 287
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 84/294 (28%), Positives = 139/294 (47%), Gaps = 27/294 (9%)
Query: 237 TKIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYV--PMLVDDVKEFFRTYSGTDFAGFSV 294
TK+ G++ +PV HS PI+HN A + +Y+ P+ +K + D GFS+
Sbjct: 7 TKLLGVIGDPVKHSFSPIMHNAAIAELGVDYVYLAFPVAAAALKAALDGFWAIDLQGFSI 66
Query: 295 GIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALRERQG 354
IPHK+ +A + + P A+ +GAVNT+ R + G NTD ++ ++ R+
Sbjct: 67 TIPHKQAIMAHLEAIAPEAELVGAVNTVWRTETGWQ--GTNTDVAGFVAPLQALERDW-- 122
Query: 355 INGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGA-RVIIFNRNYERAKALADAVSGE 413
S+ +P V++G GGA RA+ G G ++ + R+ E+ +++
Sbjct: 123 -----SNVTP------VILGNGGAARAVVVGCHQLGCPQIHVLGRDPEKLAQFSESWQNT 171
Query: 414 AL------HFEYLHEFFPEKGMILANASAIGMEPNSDQSPVPKE---ALKAYELVFDAVY 464
L H + + +L NA+ IGM P D SPV E L + +D +Y
Sbjct: 172 PLAGKVQTHLWGDRQRLIPQAQLLINATPIGMFPKVDASPVSDELMANLPPGAIAYDLIY 231
Query: 465 TPRNTRLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRKLVLEQF 518
TP T+ L++A GA ++ G EM ++Q + G P D MR+ +L
Sbjct: 232 TPSPTQFLKQAQTQGAAIIDGSEMLVQQGAIALEKWLGQPVPVDTMRQALLNHL 285
>gi|334116684|ref|ZP_08490776.1| Shikimate dehydrogenase [Microcoleus vaginatus FGP-2]
gi|333461504|gb|EGK90109.1| Shikimate dehydrogenase [Microcoleus vaginatus FGP-2]
Length = 325
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 88/304 (28%), Positives = 141/304 (46%), Gaps = 38/304 (12%)
Query: 233 INPDTKIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLVD--DVKEFFRTYSGTDFA 290
I TK+ G++ +PV HS P +HN A H + +Y+P V D+K ++
Sbjct: 2 IKGTTKLLGVIGHPVEHSLSPAMHNAAISHLGVDFVYLPFPVKPGDLKAALAGFAAIGVR 61
Query: 291 GFSVGIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIE---- 346
GFS+ IPHK+ + EV P+A++IGAVNT+ D G NTD E ++ ++
Sbjct: 62 GFSITIPHKQAILPLLSEVSPIARAIGAVNTVYLS--DKGWCGTNTDVEGFLAPLQTPPT 119
Query: 347 --------DALRE-RQGINGVASHTSPIAG----------KIFVLVGAGGAGRALAFGAK 387
DA +G V S P G K+ V++G GGA RA+ G
Sbjct: 120 PPYQGGAKDATSPLERGNTAVESCPPPYQGGARGGSDWSQKVAVILGNGGAARAVVAGCA 179
Query: 388 SRG-ARVIIFNRNYERAKALADAVSGEALHFEYLHEFFPE-------KGMILANASAIGM 439
G A + + RN + + + + L E + +L N + +GM
Sbjct: 180 QLGCAEIHVVGRNEQNLAEFQQSWINSPMPVQNLQVHTWENLSMLISQADLLVNTTPVGM 239
Query: 440 EPNSDQSPVPKEAL---KAYELVFDAVYTPRNTRLLREAAEVGATVVSGVEMFIRQALGQ 496
P ++SPV + AL A +V+D +YTP T+ L++A GA + G+EM ++Q
Sbjct: 240 YPQGEKSPVAEGALDRISAGAIVYDLIYTPNPTQFLKDAKLRGARAIDGLEMLVQQGAAA 299
Query: 497 FRLF 500
+++
Sbjct: 300 LKIW 303
>gi|422416778|ref|ZP_16493735.1| shikimate dehydrogenase [Listeria innocua FSL J1-023]
gi|313622721|gb|EFR93071.1| shikimate dehydrogenase [Listeria innocua FSL J1-023]
Length = 289
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 93/293 (31%), Positives = 143/293 (48%), Gaps = 33/293 (11%)
Query: 231 EHINPDTKIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVP--MLVDDVKEFFRTYSGTD 288
+ I+ T++ L+ PV HSK PI++N +F+ + Y+ + V V + +
Sbjct: 3 KRISGSTRLLSLIGTPVDHSKSPIMYNYSFQKAGLDYAYLAFDIPVSKVADAIAAIKTFN 62
Query: 289 FAGFSVGIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDA 348
G +V +P K + D++ P A+ IGAVNTII DGKL G+ TD S + D+
Sbjct: 63 LRGSNVTMPCKSEVLKYMDDLSPAARMIGAVNTIINE--DGKLTGHITDGLGFASNLRDS 120
Query: 349 LRERQGINGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGAR-VIIFNRN---YERAK 404
G++ +AGK ++GAGGA A+ GA+ + IFN YE+AK
Sbjct: 121 -----GVD--------VAGKKMTIIGAGGAATAIQVQCALDGAQEITIFNIKDDFYEKAK 167
Query: 405 ALADAVSGEA----LHF------EYLHEFFPEKGMILANASAIGMEPNSDQSPVPKEALK 454
++ E +H LHE IL NA+ +GM P+ +++PV +
Sbjct: 168 QTIASIKQEVPDCIVHIYDLNDTAKLHEEIATSD-ILVNATLVGMHPHENETPVKDTTVF 226
Query: 455 AYEL-VFDAVYTPRNTRLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAP 506
+L V D VY P+ TRLL +A G+ V G+ M + Q ++LFTG P
Sbjct: 227 RKDLIVTDVVYNPKKTRLLLDAEAAGSKTVGGLGMLLWQGAEAYKLFTGKDMP 279
>gi|46578532|ref|YP_009340.1| shikimate 5-dehydrogenase [Desulfovibrio vulgaris str.
Hildenborough]
gi|387152014|ref|YP_005700950.1| shikimate 5-dehydrogenase [Desulfovibrio vulgaris RCH1]
gi|46447943|gb|AAS94599.1| shikimate 5-dehydrogenase [Desulfovibrio vulgaris str.
Hildenborough]
gi|311232458|gb|ADP85312.1| shikimate 5-dehydrogenase [Desulfovibrio vulgaris RCH1]
Length = 301
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 90/285 (31%), Positives = 138/285 (48%), Gaps = 24/285 (8%)
Query: 238 KIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYV--PMLVDDVKEFFRTYSGTDFAGFSVG 295
+++G+V +P+GH+ P+LHN F +Y+ P+ F G SV
Sbjct: 35 RLYGIVGHPLGHTLSPLLHNWGFALHSLPAVYMAWPVPPGRFASFMEAVRTLPVHGASVT 94
Query: 296 IPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALRERQGI 355
IPHKE A+ CD V A+++GAVNT+ DG + G NTD ++ LR R
Sbjct: 95 IPHKEEALRLCDRVTDRARAVGAVNTLFLE--DGVVCGENTD----VTGFLAPLRAR--- 145
Query: 356 NGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGAR-VIIFNRNYERAKALADAVSGEA 414
GV + +++GAGGA RA+ G G R V I NR +++A LA A +
Sbjct: 146 -GVRIDEA-------LVLGAGGAARAVLAGLVELGVRRVRISNRTHDKAMELAGAFGADV 197
Query: 415 LHFEYLHEFFPEKGMILANASAIGME-PNSDQSPVPKEALKAYELVFDAVYTPRNTRLLR 473
+ ++ E ++ N + GM+ +SP+P+ A + +D VY P TR L
Sbjct: 198 VPWD---ERGSAAAGLVVNTTPCGMQGARMGESPLPEGAFSGRGMAYDLVYNPLTTRFLA 254
Query: 474 EAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRKLVLEQF 518
+A G G+ MF+ Q QFR++TG P + R+L+ E
Sbjct: 255 DARAAGWETQDGLGMFVEQGREQFRIWTGLDLPAEGARRLIAEAL 299
>gi|257388971|ref|YP_003178744.1| shikimate 5-dehydrogenase [Halomicrobium mukohataei DSM 12286]
gi|257171278|gb|ACV49037.1| shikimate 5-dehydrogenase [Halomicrobium mukohataei DSM 12286]
Length = 265
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 100/287 (34%), Positives = 135/287 (47%), Gaps = 29/287 (10%)
Query: 238 KIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLVDDVK-----EFFRTYSGTDFAGF 292
+FGL+ NPVGHS P +H A+ + YV D+ E RT T G
Sbjct: 2 DVFGLIGNPVGHSLSPPMHEAAYEQLDMDARYVTFEPDEDAAAAAIESARTLGIT---GL 58
Query: 293 SVGIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALRER 352
+V IP K+ A D PLA+ IGAVNT+ + + GYNTD A+ A+ R
Sbjct: 59 NVTIPFKQAAFEAVDP-DPLARRIGAVNTVDLTGDEPR--GYNTDAVGAVRALR---RHD 112
Query: 353 QGINGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGARVIIFNRNYERAKALADAVSG 412
++G A A+AFG G V I NR ERA LA V G
Sbjct: 113 VALDGTAVVVGAGGAGR-----------AVAFGLADEGMSVRIANRTVERAHDLAADVPG 161
Query: 413 EALH-FEYLHEFFPEKGMILANASAIGMEPNSDQSPVPKEALKAYELVFDAVYTPRNTRL 471
H + LH+ + +L N +++GM+ D +PVP +AL V DAVY+P TRL
Sbjct: 162 ATGHGLDELHDTVADAD-VLVNCTSVGMD--EDATPVPADALHGDLSVLDAVYSPIETRL 218
Query: 472 LREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRKLVLEQF 518
LR+AA G T V G M + Q + F +TG AP D M + ++
Sbjct: 219 LRDAAAAGGTTVDGAWMLLFQGVEAFERWTGLDAPVDHMNDALRDRL 265
>gi|410460448|ref|ZP_11314126.1| shikimate 5-dehydrogenase [Bacillus azotoformans LMG 9581]
gi|409927063|gb|EKN64209.1| shikimate 5-dehydrogenase [Bacillus azotoformans LMG 9581]
Length = 279
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 90/293 (30%), Positives = 138/293 (47%), Gaps = 32/293 (10%)
Query: 238 KIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLV--DDVKEFFRTYSGTDFAGFSVG 295
K+FGL+ +PVGHS PI+HN F + Y V ++++ +GF+V
Sbjct: 3 KLFGLLGHPVGHSMSPIMHNDQFSFLGLDCYYHAFDVHPNELENAVNGIKALGLSGFNVT 62
Query: 296 IPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALRERQGI 355
IPHK + DE+ A IGAVNT++ R DGKL GYNTD +
Sbjct: 63 IPHKVEIMKYLDEIDEEALQIGAVNTVVNR--DGKLYGYNTDGK---------------- 104
Query: 356 NGVASHTSPIAGKIFV-----LVGAGGAGRALAFGAKSRGARVI-IFNRNYERAKALADA 409
G A IAG F+ +VGAGGA R + GA I I NR E+A+ L
Sbjct: 105 -GFAVSLQTIAGADFLNKKMLIVGAGGAARGVFVTLARMGANAIDIANRTVEKAEELISN 163
Query: 410 ----VSGEALHFEYLHEFFPEKGMILANASAIGMEPNSDQSPVPKEALKAYELVFDAVYT 465
V A + + E +I+ N +++GM P ++ P+ ++ ++ D +Y
Sbjct: 164 NPYRVQSNARSIKEAEKNLAEYQIII-NTTSVGMSPKIEELPLQLTNMQPGTILSDIIYN 222
Query: 466 PRNTRLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRKLVLEQF 518
P T+ L+E GA +G+ MF+ Q F ++T + M ++V++Q
Sbjct: 223 PLETKWLKEGKIAGAVTQNGIGMFVGQGALAFEMWTKEKPDYNRMEQIVMKQL 275
>gi|329764791|ref|ZP_08256384.1| shikimate 5-dehydrogenase [Candidatus Nitrosoarchaeum limnia SFB1]
gi|329138704|gb|EGG42947.1| shikimate 5-dehydrogenase [Candidatus Nitrosoarchaeum limnia SFB1]
Length = 273
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 86/287 (29%), Positives = 142/287 (49%), Gaps = 26/287 (9%)
Query: 237 TKIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLV--DDVKEFFRTYSGTDFAGFSV 294
+K F ++ +P+ HS P +H+ AFR + Y+ + +++E + GF+V
Sbjct: 2 SKTFAVIGDPIDHSLSPNIHSAAFRELNLDCSYIAYRIPKGELEEGVESLKKIKIDGFNV 61
Query: 295 GIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALRERQG 354
IPHK + D++ IGAVNT+ +G L GYNTD + + +
Sbjct: 62 TIPHKIEMMKYIDKLDDSCSIIGAVNTVSND--NGILKGYNTDMDGFLEPFK-------- 111
Query: 355 INGVASHTSPIAGKIFVLVGAGGAGRALAFG-AKSRGARVIIFNRNYERAKALAD----- 408
I K +L+GAGGA RA+ G AK + I NR + A L +
Sbjct: 112 -----KKNLSIKNKKILLLGAGGAARAIVAGCAKEHAQTITIANRTIQNANNLVNFSKKI 166
Query: 409 AVSGEALHFEYLHEFFPEKGMILANASAIGMEPNSDQSPVPKEALKAYELVFDAVYTPRN 468
+ A+ E + + +I+ NA+++G++ ++ SP+ E + +V+D VY P N
Sbjct: 167 GLDAIAIKIEDVGDTAKNYDVIV-NATSVGLK--NEPSPISLEEINPKTIVYDIVYMPIN 223
Query: 469 TRLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRKLVL 515
T LL++A E GAT++ G EM + QA F ++ G AP + M+K +L
Sbjct: 224 TDLLKKAKEKGATIIYGYEMLLGQATRAFEIWHGIEAPYNAMKKALL 270
>gi|315645929|ref|ZP_07899050.1| shikimate 5-dehydrogenase [Paenibacillus vortex V453]
gi|315278690|gb|EFU42004.1| shikimate 5-dehydrogenase [Paenibacillus vortex V453]
Length = 286
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 93/292 (31%), Positives = 139/292 (47%), Gaps = 20/292 (6%)
Query: 233 INPDTKIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLV--DDVKEFFRTYSGTDFA 290
I D + G++ +P+GHSK P +HN A +G YVP+ V + + E + F
Sbjct: 7 IERDYLLLGVMGDPIGHSKSPAMHNAAITALGLSGAYVPLHVRPEGLGEAIQAVKALGFR 66
Query: 291 GFSVGIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALR 350
G +V IPHK + D V A+ IGAVNTI+ +G L GYNTD + +++D
Sbjct: 67 GVNVTIPHKVEVMKYLDVVDEGARQIGAVNTIVND--NGTLKGYNTDGIGYVRSLKD--- 121
Query: 351 ERQGINGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGARVI-IFNRNYERAKALADA 409
+ GK V++GAGGA R + + I I NR +A ALA+
Sbjct: 122 ---------EACPDLKGKRIVVLGAGGAARGIIYALIGEKPETISIVNRTAAKALALAEE 172
Query: 410 VSGEALHFEYLHEFFPEKGM---ILANASAIGMEPNSDQSPVPKEALKAYELVFDAVYTP 466
S A Y ++ E + ++ N +++GM P + P+P+ + +V D +Y P
Sbjct: 173 WSSLADLRGYGEDYAEEALLTADVIINTTSVGMFPRISEIPIPQGHIPEGIVVSDLIYNP 232
Query: 467 RNTRLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRKLVLEQF 518
T LLR+ TV G+ MFI Q +TG AP M++ VL F
Sbjct: 233 LKTELLRQGELRQCTVHGGLGMFINQGAYALEYWTGLTAPVQAMKEAVLSSF 284
>gi|134045782|ref|YP_001097268.1| shikimate 5-dehydrogenase [Methanococcus maripaludis C5]
gi|132663407|gb|ABO35053.1| shikimate dehydrogenase [Methanococcus maripaludis C5]
Length = 280
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 87/278 (31%), Positives = 143/278 (51%), Gaps = 25/278 (8%)
Query: 233 INPDTKIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLV--DDVKEFFRTYSGTDFA 290
I+ TK+ GL+ +PV HS PI+HN A N Y+ V +++K+ A
Sbjct: 3 IDSKTKLLGLIGHPVDHSFSPIMHNAAIEDLGINYRYLAFDVSEENLKDVVAGAKAFQIA 62
Query: 291 GFSVGIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALR 350
GF++ IPHK + DE+ AK+IGAVNT+ + +GK +GYNTD A + AL
Sbjct: 63 GFNITIPHKMNIMKYLDEIDDDAKAIGAVNTV--KIENGKAIGYNTDGIGA----KKALE 116
Query: 351 ERQGINGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGARVIIFNRNYERAKALADAV 410
E+ GI + +G+GG RA+++ ++ ++ I NRN E+AK L++ +
Sbjct: 117 EKTGILINKNILI---------IGSGGGSRAVSY-ELAKENKLTIINRNIEKAKILSEEL 166
Query: 411 SG-----EALHFEYLHEFFPEKGMILANASAIGMEPNSDQSPV-PKEALKAYELVFDAVY 464
S ++ + L+ + +I+ N + +GM PN + PV P +K +V D +Y
Sbjct: 167 SKNLKKQNSITYGDLNVDIKDFDIII-NTTPVGMYPNMNVKPVIPLNDIKYGAVVMDLIY 225
Query: 465 TPRNTRLLREAAEVGATVVSGVEMFIRQALGQFRLFTG 502
P L+EA + GA ++G+ M + Q F ++ G
Sbjct: 226 NPLEPVFLKEAIKYGAETINGIGMLVYQGAVSFEIWAG 263
>gi|392426608|ref|YP_006467602.1| shikimate dehydrogenase [Desulfosporosinus acidiphilus SJ4]
gi|391356571|gb|AFM42270.1| shikimate dehydrogenase [Desulfosporosinus acidiphilus SJ4]
Length = 279
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 84/286 (29%), Positives = 135/286 (47%), Gaps = 22/286 (7%)
Query: 238 KIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLV--DDVKEFFRTYSGTDFAGFSVG 295
K F ++ NP+ HS P +HN ++H + IY V + + E FAG++V
Sbjct: 3 KHFAVIGNPIEHSFSPAMHNAGYKHLGIDAIYHRFQVYPNSLAEAVYGLCALGFAGWNVT 62
Query: 296 IPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALRERQGI 355
+PHKE + D + P A+ GAVNT+ + +DGK +G+NTD + I +IE L+E
Sbjct: 63 LPHKETIIPYLDTLTPQARRAGAVNTV--KILDGKKIGHNTDGDGFICSIEGELKE---- 116
Query: 356 NGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGARVIIFNRNYERAKALADAV---SG 412
K VL+GAGGA + +A +G V I NR ++A+ L + G
Sbjct: 117 ---------FRDKKAVLLGAGGASKGIALALAEKGMHVHILNRTLQKAEELVQTIHQKGG 167
Query: 413 EALHFEYLHEFFPEKGMILANASAIGMEPNSDQSPVPKEALKAYELVFDAVYTPRNTRLL 472
E+ + E +L + +G++ + P+ + L D + + T L
Sbjct: 168 TGSFGEFRPGDWLEDVDLLVQTTPLGLK--GEPFPLRLNGVAKKTLAVDIIVNVQETAFL 225
Query: 473 REAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRKLVLEQF 518
REA + G V+ G M + Q + + GG AP + MRK + +Q
Sbjct: 226 REAKKQGCRVLDGTGMLLYQGALAWEFWLGGKAPLEAMRKGLQDQM 271
>gi|407473822|ref|YP_006788222.1| shikimate 5-dehydrogenase [Clostridium acidurici 9a]
gi|407050330|gb|AFS78375.1| shikimate 5-dehydrogenase AroE [Clostridium acidurici 9a]
Length = 282
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 85/305 (27%), Positives = 143/305 (46%), Gaps = 44/305 (14%)
Query: 233 INPDTKIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLV--DDVKEFFRTYSGTDFA 290
I+ +T ++ L+ +P+ S P +HN +F+ N Y+ + V +D+++ +
Sbjct: 3 IDANTNLYCLIGHPISKSLSPEIHNYSFKKNGINAKYIALDVSTEDLEDAVKGIKALGIR 62
Query: 291 GFSVGIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALR 350
G +V IPHK + DE+ A+ +GAVNT+ + +GKL+GYNTD + ++D
Sbjct: 63 GCNVTIPHKIDIIKYLDEIDEEAELLGAVNTV--KNENGKLIGYNTDGRGFVQVLKDKNI 120
Query: 351 ERQGINGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRG-ARVIIFNRNYERAKALADA 409
E I K ++GAGGA RA++ G ++ IFNR E+AK + D
Sbjct: 121 E-------------IKNKNIAVLGAGGAARAISIILAKEGINQITIFNRTIEKAKIIIDE 167
Query: 410 VSGEALHFEYLHEFFPE-KGM---------------ILANASAIGMEPNSDQSPVPKEAL 453
+ E FP+ GM IL N ++IGM PN D+ PV
Sbjct: 168 IK----------EKFPDVTGMYSSLESNKYDLSSVDILINCTSIGMYPNIDEMPVDPSIF 217
Query: 454 KAYELVFDAVYTPRNTRLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRKL 513
++ D VY P T+LL + + G + G++M I Q + ++ +D + +
Sbjct: 218 PRQTVICDIVYKPLKTKLLEMSEKNGNIAIGGLDMLIYQGILSEEIWLQKNIDKDLVIEW 277
Query: 514 VLEQF 518
+ E+
Sbjct: 278 IKEKI 282
>gi|425468591|ref|ZP_18847597.1| Shikimate dehydrogenase [Microcystis aeruginosa PCC 9701]
gi|389884746|emb|CCI34980.1| Shikimate dehydrogenase [Microcystis aeruginosa PCC 9701]
Length = 302
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 83/306 (27%), Positives = 148/306 (48%), Gaps = 27/306 (8%)
Query: 225 KQVYQLEHINPDTKIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLV--DDVKEFFR 282
K + + IN TK+ G++ +P+GH+ P++HN A N +Y+P+ + +++
Sbjct: 12 KPTFFMTIINGKTKLLGVIGDPIGHTLSPLMHNAAIDALGLNYVYLPLPIAPENLATAIA 71
Query: 283 TYSGTDFAGFSVGIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAI 342
S D GFSV IPHK + ++ A+ +GAVNT+ R + G NTD + +
Sbjct: 72 GLSAIDLQGFSVTIPHKLAIIPLLSQITEKARLVGAVNTVWRTETGWQ--GTNTDVDGFL 129
Query: 343 SAIEDALRERQGINGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRG-ARVIIFNRNYE 401
+ ++ ++ +N V ++G GGA RA+ G + + RN +
Sbjct: 130 APLKSLDKDWSQVNPV-------------ILGNGGAARAVVVACAQLGCGEIHVVGRNQK 176
Query: 402 RAKALADAVSGEALH-FEYLHEFFPEKGMI-----LANASAIGMEPNSDQSPVPKEALKA 455
+ ++ + +L+ +H + +G++ L N++ IGM P +QSPV E L
Sbjct: 177 KLDPFKESWANTSLYDLLEVHSWDELEGLVSTTELLINSTPIGMSPQGEQSPVELELLDL 236
Query: 456 YE---LVFDAVYTPRNTRLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRK 512
+ +D +Y PR T+ LR A G ++ G+EM + Q ++ G P MR+
Sbjct: 237 LPPSAIAYDLIYNPRPTKFLRLAQTRGIRIIDGLEMLVNQGAIALEIWLGQPVPVSVMRE 296
Query: 513 LVLEQF 518
+L+QF
Sbjct: 297 ALLKQF 302
>gi|291522732|emb|CBK81025.1| shikimate dehydrogenase [Coprococcus catus GD/7]
Length = 289
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 85/297 (28%), Positives = 141/297 (47%), Gaps = 30/297 (10%)
Query: 231 EHINPDTKIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLV--DDVKEFFRTYSGTD 288
+ I T + GL+ +PV HS P++HN +FR + Y+ V D++K
Sbjct: 3 DRITGHTVLTGLLGSPVAHSISPMMHNESFRQLGLDYAYLAFDVGTDNLKTAVEGLKVLG 62
Query: 289 FAGFSVGIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDA 348
GF++ +P K CD++ P A+ IGAVNT++ +G L G+ TD + A DA
Sbjct: 63 VRGFNLTMPDKNLMCTYCDKLSPAAELIGAVNTVVND--NGVLTGHTTDGIGYMEAARDA 120
Query: 349 LRERQGINGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGARVI-IFN---RNYERAK 404
+ + GK L+G GGA A+ A G + I +FN + Y R +
Sbjct: 121 GYD-------------LTGKTMTLLGGGGAATAICVQAALDGLKEIRVFNIKDQFYGRLE 167
Query: 405 ALADAVSGEALHFEYLHEFFPEKGM--------ILANASAIGMEPNSDQSPVPKEALKAY 456
L ++ + LH+ E+ + IL N +++GM PN+D + +
Sbjct: 168 KLTANITAKTSCKVTLHDLADERALYDSIETSDILTNGTSVGMAPNTDACLIKDTDVFRK 227
Query: 457 ELVF-DAVYTPRNTRLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRK 512
EL+ D +Y P T+LL+ A+E G +G+ M + Q F+++TG P D +++
Sbjct: 228 ELIVSDVIYNPEQTKLLKLASEKGCPTFNGLYMLLYQGAAAFKIWTGQDMPVDIIKE 284
>gi|299822865|ref|ZP_07054751.1| shikimate dehydrogenase [Listeria grayi DSM 20601]
gi|299816394|gb|EFI83632.1| shikimate dehydrogenase [Listeria grayi DSM 20601]
Length = 274
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 87/288 (30%), Positives = 144/288 (50%), Gaps = 32/288 (11%)
Query: 240 FGLVSNPVGHSKGPILHNPAFRH----TRFNGIYVPMLVDDVKEFFRTYSGTDFAGFSVG 295
+ ++ NP+ HS P +HN AFR + I V + D E +G DF GF+V
Sbjct: 4 YAVIGNPINHSLSPSMHNAAFRSEERDANYEAIQVSVEAFDA-EIAHLLAG-DFNGFNVT 61
Query: 296 IPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALRERQGI 355
+P KE + DE+ P AK GAVNT+I+ DGK +G NTD + + + I
Sbjct: 62 VPFKERIIPHLDELSPFAKRCGAVNTVIKA--DGKWLGDNTDGAGFMEGLHE-------I 112
Query: 356 NGVASHTSPIAGKIFVLVGAGGAGRALAFG-AKSRGARVIIFNRNYERAKALADAVSGEA 414
V S +++GAGGA +A+ A + +++I NR E+A A+ + EA
Sbjct: 113 KAVTSEDR------ILIIGAGGASKAIYLALADASPQQLVIANRTVEKAAAMVQK-THEA 165
Query: 415 LHF----EYLHEFFPEKGMILANASAIGMEPNSDQSPVPKEALKAYELVFDAVYTPRNTR 470
+YL +F I+ ++IG+ + +++P+ L+A +V D +Y P T
Sbjct: 166 WSLAKAEKYLADF-----TIIIQTTSIGLPASKNETPIQLTNLQAGTVVVDIIYNPAETA 220
Query: 471 LLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRKLVLEQF 518
L++A GA + +G+ MF Q ++ +TG + + M+K +LE+
Sbjct: 221 FLKQAKTKGAVIQNGLPMFSGQGALAYQRWTGHMPNLEVMKKKLLEEL 268
>gi|297584671|ref|YP_003700451.1| shikimate 5-dehydrogenase [Bacillus selenitireducens MLS10]
gi|297143128|gb|ADH99885.1| shikimate 5-dehydrogenase [Bacillus selenitireducens MLS10]
Length = 277
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 92/288 (31%), Positives = 140/288 (48%), Gaps = 22/288 (7%)
Query: 238 KIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLV--DDVKEFFRTYSGTDFAGFSVG 295
+IFG+ +P+ HS P +H A H +G Y V + +++ + G +V
Sbjct: 3 QIFGVFGDPIEHSMSPAMHEAALSHAGIDGAYHAFHVKPEGLQDAVKGVRALGIRGVNVT 62
Query: 296 IPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALRERQGI 355
IPHK + D + PLA+ IGAVNTI+ DG L G+NTD + + L
Sbjct: 63 IPHKVDVMKHLDAIDPLAERIGAVNTIVND--DGVLTGFNTDGAGYLEGLRPLL------ 114
Query: 356 NGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGAR-VIIFNRNYERAKALADA----V 410
T P+ +++GAGGA RA+A S+ + + + NR +A LA A
Sbjct: 115 ------THPLTDMRVLIIGAGGAARAVAMTLASKEVKELYVANRTETKAGELAKACKPYA 168
Query: 411 SGEALHFEYLHEFFPEKGMILANASAIGMEPNSDQSPVPKEALKAYELVFDAVYTPRNTR 470
+ +L E +++ N +++GM PN D P+ E L +V D +Y P TR
Sbjct: 169 ASRSLTLSLAQARLMEFDLVI-NTTSVGMSPNVDNIPISLEMLGRDTIVTDLIYNPMETR 227
Query: 471 LLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRKLVLEQF 518
LL+ A + GA +G+ MF+ Q F +TG AP D MR+ VL+Q
Sbjct: 228 LLKMARQKGAKTQNGLNMFVLQGGLAFEKWTGKTAPRDIMRQTVLDQL 275
>gi|223044396|ref|ZP_03614430.1| shikimate 5-dehydrogenase [Staphylococcus capitis SK14]
gi|222442265|gb|EEE48376.1| shikimate 5-dehydrogenase [Staphylococcus capitis SK14]
Length = 269
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 83/284 (29%), Positives = 140/284 (49%), Gaps = 26/284 (9%)
Query: 240 FGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPM--LVDDVKEFFRTYSGTDFAGFSVGIP 297
F ++ +P+ HS PI+H+ F + N Y P+ +D+ + +GF+V IP
Sbjct: 3 FAVIGHPISHSLSPIMHSANFSNLSLNYTYEPLDIPIDEFHLLRDIITEKKLSGFNVTIP 62
Query: 298 HKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALRERQGING 357
HKE + DEV +K++GAVNT++ R DGK +GYNTD ++ ++ +
Sbjct: 63 HKERIIPYLDEVDEQSKTVGAVNTVLIR--DGKWIGYNTDGIGYVTGLKQIYDD------ 114
Query: 358 VASHTSPIAGKIFVLVGAGGAGRALAFG-AKSRGARVIIFNRNYERAKALADAVSGEALH 416
+ +++GAGGA + +A K ++ I NR R + ++ +L+
Sbjct: 115 -------LKNAYILILGAGGASKGIANELTKFVEPKLTIANRTMSRFEDWNLDINAISLN 167
Query: 417 F--EYLHEFFPEKGMILANASAIGMEPNSDQSPVPKEALKAYELVFDAVYTPRNTRLLRE 474
+YL EF I+ N + GM+ N+D S + L + LV D VY P T +L E
Sbjct: 168 DAEKYLDEF-----DIVINTTPAGMDKNND-SVINLRNLSPHTLVSDIVYIPYKTPILLE 221
Query: 475 AAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRKLVLEQF 518
A G + +G++MF+ Q F+++TG M+ VL++
Sbjct: 222 AESKGNPIYNGLDMFVYQGAESFKIWTGEQPNIQIMKNTVLDKL 265
>gi|443324881|ref|ZP_21053604.1| shikimate 5-dehydrogenase [Xenococcus sp. PCC 7305]
gi|442795517|gb|ELS04881.1| shikimate 5-dehydrogenase [Xenococcus sp. PCC 7305]
Length = 289
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 88/303 (29%), Positives = 143/303 (47%), Gaps = 30/303 (9%)
Query: 230 LEHINPDTKIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLVD--DVKEFFRTYSGT 287
++ I TK+ G++ +PV HS P++ N A + IYVP V+ ++K+ +
Sbjct: 1 MKLITGKTKLLGIIGSPVEHSLSPVMQNAAIAELGVDYIYVPFPVEKINLKQAIMGFEVI 60
Query: 288 DFAGFSVGIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIED 347
GF++ IPHK+ + EV AK +GAVNT+ K G NTD E ++ +++
Sbjct: 61 GVQGFNITIPHKQSIMTLLSEVTSTAKMVGAVNTVWYNGAGWK--GTNTDVEGFVAPLKE 118
Query: 348 ALRERQGINGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRG-ARVIIFNRN------- 399
R+ S T+ I ++G GGA RA+ G G V I R+
Sbjct: 119 MARDW-------SQTTAI------VLGNGGAARAVVVGLAELGFGSVHIIGRDRQKLVNF 165
Query: 400 YERAKALADAVSGEALHF-EYLHEFFPEKGMILANASAIGMEPNSDQSPVPKE---ALKA 455
Y+ + + +H+ E L E P + L N + +GM P+ D SPV E LK
Sbjct: 166 YQTWQNMPKITKLLKVHYPETLPELLPTADL-LVNTTPVGMYPHIDASPVSAELIEQLKP 224
Query: 456 YELVFDAVYTPRNTRLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRKLVL 515
+ +D +YTP T+ LR A++ G + G+EM ++Q ++ P + MR +
Sbjct: 225 DAIAYDLIYTPSPTKFLRFASDRGLKAIDGLEMLVQQGAAALEIWLQQPVPINTMRNSLK 284
Query: 516 EQF 518
+Q
Sbjct: 285 KQL 287
>gi|314933766|ref|ZP_07841131.1| shikimate dehydrogenase [Staphylococcus caprae C87]
gi|313653916|gb|EFS17673.1| shikimate dehydrogenase [Staphylococcus caprae C87]
Length = 269
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 84/285 (29%), Positives = 141/285 (49%), Gaps = 28/285 (9%)
Query: 240 FGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLVDDVKEFF---RTYSGTDFAGFSVGI 296
F ++ +P+ HS PI+H+ F + N Y P+ + + EF + +GF+V I
Sbjct: 3 FAVIGHPISHSLSPIMHSANFSNLSLNYTYEPLDIP-IDEFLLLRDIITEKKLSGFNVTI 61
Query: 297 PHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALRERQGIN 356
PHKE + DEV +K++GAVNT++ R DGK +GYNTD ++ ++ +
Sbjct: 62 PHKERIIPYLDEVDEQSKTVGAVNTVLIR--DGKWIGYNTDGIGYVTGLKQIYDD----- 114
Query: 357 GVASHTSPIAGKIFVLVGAGGAGRALAFG-AKSRGARVIIFNRNYERAKALADAVSGEAL 415
+ +++GAGGA + +A K ++ I NR R + ++ +L
Sbjct: 115 --------LKNAYILILGAGGASKGIANELTKFVEPKLTIANRTMSRFEDWNLDINAISL 166
Query: 416 HF--EYLHEFFPEKGMILANASAIGMEPNSDQSPVPKEALKAYELVFDAVYTPRNTRLLR 473
+ +YL EF I+ N + GM+ N+D S + L + LV D VY P T +L
Sbjct: 167 NDAEKYLDEF-----DIVINTTPAGMDKNND-SVINLRNLSPHTLVSDIVYIPYKTPILL 220
Query: 474 EAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRKLVLEQF 518
EA G + +G++MF+ Q F+++TG M+ VL++
Sbjct: 221 EAESKGNPIYNGLDMFVYQGAESFKIWTGEQPNIQIMKNTVLDKL 265
>gi|320536898|ref|ZP_08036890.1| putative shikimate 5-dehydrogenase [Treponema phagedenis F0421]
gi|320146254|gb|EFW37878.1| putative shikimate 5-dehydrogenase [Treponema phagedenis F0421]
Length = 496
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 127/510 (24%), Positives = 227/510 (44%), Gaps = 45/510 (8%)
Query: 11 VCTQLECETTEEMQASIEQAKVEGADLVELCIDSMEFSHISEVDKLIQHPTLPAI--VSY 68
+C L +T E+ +++ + D+ EL D ++ + + + + +P I V
Sbjct: 5 ICLVLTEDTIEKNLVLVQKYR-SLIDIAELRADFLQPQEVLLIRRFPELAGIPVILTVRR 63
Query: 69 RLKSSRKSSDEACKNTCLQVLRRALDL-------DVEFVEMDYEVASDPLMSEIIYSRS- 120
R+ R ++ EA + T + R L + +++++ ++ + P + E +R+
Sbjct: 64 RIDGGRFTAGEATRVT---IFARGLAFSDPDPAKNFSYIDLEGDLQA-PSIEEA--ARAF 117
Query: 121 NTKIIVSSYLNGGGKPTTEKLGDVIACMQATGADVMKLEIAVDSITDLAPVFEMLTHCQV 180
N II S Y K + I ++ + +++K+ +S++D+ +F H +
Sbjct: 118 NITIIRSKY---NHKKAITDIDAEIQQVRRSDDEIVKIAYKANSLSDVTNLFRFANHERG 174
Query: 181 PLIALAVGSRGLISQLLGPKFGGFLVYGSLGGKS---VPGLPTLVSLKQVYQLEHINPDT 237
I +A+G+ G+ S+LL + + Y K+ +PGL SL +Y+ + IN T
Sbjct: 175 RCILVAMGAYGVPSRLLAGRLNSEITYVMPQEKTSEFIPGLIDPFSLVYLYRFKQINEKT 234
Query: 238 KIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPM---LVDDVKEFFRTYSGTDFAGFSV 294
KIFG+V + V S GP +HN A+ N +Y+P+ + +DV EF +G S+
Sbjct: 235 KIFGVVGSDVSESLGPQMHNKAYAKQNINAVYIPINARVSEDVIEFAEV---AGVSGLSI 291
Query: 295 GIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALRERQ- 353
P K+P V+ +E +I A NT + +G +NTD ES A+++ L+ +
Sbjct: 292 DHPFKKPIVSSMNECSKTTTAIRAANTAVYS--NGSWKAFNTDVESFSKALQEFLQVKNL 349
Query: 354 GINGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGARVIIFNRNYERAKALADAVSGE 413
N VA + A + G+A IFNR E+AK +A +
Sbjct: 350 RFNRVAIIGAGGAAQAVAYAVKQLHGKAC------------IFNRTVEKAKQIALPYRFK 397
Query: 414 -ALHFEYLHEFFPEKGMILANASAIGMEPNSDQSPVPKEALKAYELVFDAVYTPRNTRLL 472
A+ + + I+ + +G + + P+ E VFD Y P T LL
Sbjct: 398 WAILAPASVKLLEKYSSIIIQTTTVGNSFSLAEDPLFFYTFTGKEAVFDLNYKPEKTALL 457
Query: 473 REAAEVGATVVSGVEMFIRQALGQFRLFTG 502
A E G + +G M Q QF++FTG
Sbjct: 458 THAEEAGCKITNGYRMLEYQTYRQFKIFTG 487
>gi|444353151|ref|YP_007389295.1| Shikimate/quinate 5-dehydrogenase I beta (EC 1.1.1.282)
[Enterobacter aerogenes EA1509E]
gi|443903981|emb|CCG31755.1| Shikimate/quinate 5-dehydrogenase I beta (EC 1.1.1.282)
[Enterobacter aerogenes EA1509E]
Length = 287
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 87/300 (29%), Positives = 149/300 (49%), Gaps = 30/300 (10%)
Query: 231 EHINPDTKIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLVDD--VKEFFRTYSGTD 288
E + T++ GL++ P+ HS P +HN AF H + Y+ VD+ +K+ + +
Sbjct: 3 ERLTGHTELIGLIATPIRHSMSPTMHNEAFAHLGLDYAYLAFEVDNQELKDVVQGFRALK 62
Query: 289 FAGFSVGIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDA 348
G++V +P+K D++ P A+ +GAVNT++ +G L G+ TD + A+ +A
Sbjct: 63 LRGYNVSMPNKTEICQYLDKLSPAAQLVGAVNTVVND--NGVLTGHITDGTGYMRALSEA 120
Query: 349 LRERQGINGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGARVI-IFNR------NYE 401
GI+ I GK ++GAGGA A++ A G + I IFNR N E
Sbjct: 121 -----GID--------IIGKKMTILGAGGAATAISVQAALDGVKAISIFNRKDKFFANAE 167
Query: 402 RAKALADAVSGEALHFEYLHEFFP-----EKGMILANASAIGMEPNSDQSPVPKEA-LKA 455
+ A + +H L + + +IL NA+ +GM+P Q +P ++ L+
Sbjct: 168 QTVAKIRDNTDCEIHLFDLDDHAKLRAEIDSSVILTNATGVGMKPFEGQMLLPNDSFLRP 227
Query: 456 YELVFDAVYTPRNTRLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRKLVL 515
+V D VY PR T LL A + G ++G+ M + Q F ++TG P ++++ ++
Sbjct: 228 DLIVSDVVYNPRKTYLLEVAEKKGCRTLNGLGMMLWQGARAFEIWTGKEMPVEYVKSILF 287
>gi|347549627|ref|YP_004855955.1| putative oxidoreductase [Listeria ivanovii subsp. ivanovii PAM 55]
gi|346982698|emb|CBW86717.1| Putative oxidoreductase [Listeria ivanovii subsp. ivanovii PAM 55]
Length = 289
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 91/299 (30%), Positives = 148/299 (49%), Gaps = 31/299 (10%)
Query: 231 EHINPDTKIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVP--MLVDDVKEFFRTYSGTD 288
I+ T++ L+ PV HSK PI++N +F+ + Y+ + V V + +
Sbjct: 3 NRISGSTRLLSLIGTPVDHSKSPIMYNYSFQKAGLDYAYLAFDIPVTKVADAITAMKTFN 62
Query: 289 FAGFSVGIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDA 348
G +V +P K + D++ P A+ IGAVNTII DGKL G+ TD S + D+
Sbjct: 63 LRGSNVTMPCKSEVLKYMDDLSPAARMIGAVNTIINE--DGKLTGHITDGLGFASNLRDS 120
Query: 349 LRERQGINGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGARVI-IFNRN---YERAK 404
G++ IAGK ++GAGGA A+ + GA+ I IFN Y++AK
Sbjct: 121 -----GVD--------IAGKKMTIIGAGGAATAIQVQSALDGAKEIAIFNIKDNFYQKAK 167
Query: 405 ALADAVSGEA----LHFEYLHE---FFPEKGM--ILANASAIGMEPNSDQSPVPKEALKA 455
++ E +H L++ + E IL NA+ +GM P +++PV + +
Sbjct: 168 QTVTSIKKEVPDCIVHIYDLNDTEKLYAEIATSDILVNATLVGMHPYENETPVKDATIFS 227
Query: 456 YELVF-DAVYTPRNTRLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRKL 513
+L+ D VY P+ T+L+ +A G V G+ M + Q ++LFTG P +++L
Sbjct: 228 KDLIVADVVYNPKKTKLMLDAEAAGCKTVGGLGMLLWQGAEAYKLFTGEDMPVSEVKEL 286
>gi|315283346|ref|ZP_07871557.1| shikimate dehydrogenase [Listeria marthii FSL S4-120]
gi|313612994|gb|EFR86925.1| shikimate dehydrogenase [Listeria marthii FSL S4-120]
Length = 289
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 90/299 (30%), Positives = 147/299 (49%), Gaps = 35/299 (11%)
Query: 233 INPDTKIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPM--LVDDVKEFFRTYSGTDFA 290
I+ T++ GL+ P+ HSK P+++N +F+ + Y+ ++ V + +
Sbjct: 5 ISGTTRLLGLIGTPIDHSKSPVMYNYSFQKAGLDYAYLAFDTPIEKVADAISAIKTFNLR 64
Query: 291 GFSVGIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALR 350
G +V +P K + D++ P A+ IGAVNTI+ +GKL G+ TD ++ + DA
Sbjct: 65 GSNVTMPCKSEVLKYMDDLSPAARMIGAVNTIVNE--NGKLTGHITDGLGFVANLRDA-- 120
Query: 351 ERQGINGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGAR-VIIFNRN---YERAKAL 406
H +AGK ++GAGGA A+ GA+ + IFN YE+AK
Sbjct: 121 ----------HVD-VAGKKMTIIGAGGAATAIQVQCALDGAKEITIFNIKDAFYEKAKQT 169
Query: 407 ADAVSGEA----LHFEYLHEFFPEK-------GMILANASAIGMEPNSDQSPVPKEALKA 455
++ E +H L++ EK IL NA+ +GM PN ++P+ ++
Sbjct: 170 ITSIKQEVPNCIVHIYDLND--TEKLNAEIATSDILVNATLVGMHPNEHETPINNTSVFR 227
Query: 456 YEL-VFDAVYTPRNTRLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRKL 513
EL V D VY P+ T+LL +A G +V G+ M + Q ++LFTG P ++ L
Sbjct: 228 KELIVTDIVYNPKKTKLLLDAEAAGCKIVGGLGMLLWQGAEAYKLFTGEDMPVSEVKDL 286
>gi|448677985|ref|ZP_21689175.1| shikimate 5-dehydrogenase [Haloarcula argentinensis DSM 12282]
gi|445773660|gb|EMA24693.1| shikimate 5-dehydrogenase [Haloarcula argentinensis DSM 12282]
Length = 265
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 104/285 (36%), Positives = 136/285 (47%), Gaps = 25/285 (8%)
Query: 238 KIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPM--LVDDVKEFFRTYSGTDFAGFSVG 295
++GL+ NPVGHS P +H + + YV D E G +V
Sbjct: 2 DVYGLIGNPVGHSLSPPMHEAGYEALGLDARYVTFEPAADSGAEAIEAAETLGIDGLNVT 61
Query: 296 IPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKL-VGYNTDCESAISAIEDALRERQG 354
IP K+ + D PLA+ IGAVNT+ DG GYNTD A+ A+E
Sbjct: 62 IPFKQDVLDAVDPA-PLAERIGAVNTV---DFDGGTPTGYNTDAVGAVRALE-------- 109
Query: 355 INGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGARVIIFNRNYERAKALADAVSGEA 414
H V+VGAGGAGRA+AFG G V I NR +A ALAD V +
Sbjct: 110 ------HHDVSLSGTAVVVGAGGAGRAVAFGLADEGLSVRIANRTESKADALADEVPDAS 163
Query: 415 LH-FEYLHEFFPEKGMILANASAIGMEPNSDQSPVPKEALKAYELVFDAVYTPRNTRLLR 473
H L + + +L N +++GME D +PVP +AL V DAVYTP TRLL+
Sbjct: 164 GHGLNSLPDLLADAD-VLVNCTSVGME--EDTTPVPADALHGDLAVLDAVYTPIETRLLQ 220
Query: 474 EAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRKLVLEQF 518
+AA GAT V G M + Q + F +TG AP D M + +
Sbjct: 221 DAAAAGATTVDGAWMLLYQGVEAFERWTGEDAPVDRMNDQLRDHL 265
>gi|425456616|ref|ZP_18836323.1| Shikimate dehydrogenase [Microcystis aeruginosa PCC 9807]
gi|389802233|emb|CCI18679.1| Shikimate dehydrogenase [Microcystis aeruginosa PCC 9807]
Length = 302
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 83/306 (27%), Positives = 150/306 (49%), Gaps = 27/306 (8%)
Query: 225 KQVYQLEHINPDTKIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLV--DDVKEFFR 282
K + + IN TK+ G++ +PVGH+ P++HN A N +Y+P+ + +++
Sbjct: 12 KPTFFMTIINGKTKLLGVIGDPVGHTLSPLMHNAAIDALGLNYVYLPLPIAPENLATAIA 71
Query: 283 TYSGTDFAGFSVGIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAI 342
++ D GFSV IPHK + ++ A+ +GAVNT+ R + G NTD + +
Sbjct: 72 GFAAIDLQGFSVTIPHKLAIIPLLSQITEKARLVGAVNTVWRTKTGWQ--GTNTDVDGFL 129
Query: 343 SAIEDALRERQGINGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRG-ARVIIFNRNYE 401
+ ++ ++ +N V ++G GGA RA+ G ++ + RN +
Sbjct: 130 APLKSLDKDWSRVNPV-------------ILGNGGAARAVVVACAQLGCGKIHVVGRNQK 176
Query: 402 RAKALADAVSGEALH-FEYLHEFFPEKGMI-----LANASAIGMEPNSDQSPVPKEALKA 455
+ ++ + +L+ +H + +G++ L N++ IGM P +QSPV E L
Sbjct: 177 KLDPFKESWANTSLYDLLEVHGWDELEGLLSTTELLINSTPIGMSPQGEQSPVELELLDL 236
Query: 456 YE---LVFDAVYTPRNTRLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRK 512
+ +D +Y PR T+ LR A G ++ G+EM + Q ++ G P MR+
Sbjct: 237 LPPSAIAYDLIYNPRPTKFLRLARTRGIRIIDGLEMLVNQGAIALEIWLGQPVPVSVMRE 296
Query: 513 LVLEQF 518
+L+QF
Sbjct: 297 ALLKQF 302
>gi|395329229|gb|EJF61617.1| Pentafunctional AroM protein [Dichomitus squalens LYAD-421 SS1]
Length = 1601
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 138/513 (26%), Positives = 225/513 (43%), Gaps = 56/513 (10%)
Query: 34 GADLVELCIDSMEFS--------------HISEVDKLIQH-PTLPAIVSYRLKSSRKSSD 78
G D VE+ +D + S +++E ++H TLP I + R S
Sbjct: 1096 GVDAVEVRVDLLRSSEDYDKLGPYIPPTAYVTEQIAALRHMTTLPLIFTVRTASQGGQFP 1155
Query: 79 EACKNTCLQVLRRALDLDVEFVEMDYEVASDPLMSEIIYSRSNTKIIVSSY-LNGGGKPT 137
+ + ++ A+ L VE+++++ S+ + +I + +++II S + +G +
Sbjct: 1156 DHAEKEAFELFVTAIRLGVEYIDVEIS-WSEKNIRNLIAGKGHSQIIASWHDWSGNMRWD 1214
Query: 138 TEKLGDVIACMQATGADVMKLEIAVDSITDLAPVFEML-----THCQVPLIALAVGSRGL 192
++ L + + G D++K+ + + D + + T P+IA+ +G G
Sbjct: 1215 SKALDEKYGVAREYG-DIVKIVGKANRLEDNFALHNFVLRQRATSDAKPIIAINMGVEGQ 1273
Query: 193 ISQLLGPKFGGFLVYGSLGGKSVPGLPTLVSLKQVYQLEHINPDTKIFGLVSNPVGHSKG 252
+S++L F + + L K+ PG T ++ L P K F L P+ HS
Sbjct: 1274 MSRILNSTFSP-VTHNLLPTKAAPGQLTFAQIQTALHLLGQLPAKK-FYLFGTPIAHSMS 1331
Query: 253 PILHNPAFRHTRFNGIYVPMLVDDVKEFFRT-YSGTDFAGFSVGIPHKEPAVACCDEVHP 311
P LHN AF Y + V + R + +F G SV IP K + D + P
Sbjct: 1332 PTLHNTAFEVLGLPHKYELFETETVGDEIRAAIAAPNFGGASVTIPFKRDIIPLLDRLSP 1391
Query: 312 LAKSIGAVNTIIRRPI---DG--KLVGYNTDCESAISAIEDALRERQGINGVASHTSPIA 366
A++IGAVNT+I P+ DG +LVG NTD +I +L S +
Sbjct: 1392 DAEAIGAVNTVI--PVLTADGAVQLVGENTDWRGITHSIRRSLPP-----------SVLK 1438
Query: 367 GKIFVLVGAGGAGRALAFGAKSRGARVI-IFNRNYERAKALADAVSGEALHFEYLHEFFP 425
+ +++GAGG RA + G I +FNR A AL +A + F +P
Sbjct: 1439 PEAALIIGAGGTSRAAIYALWKLGIETIYLFNRTASSAHALVNAFPDVNIKFIAALGAWP 1498
Query: 426 EKG----MILAN--ASAIGME-PNSDQSPVPKEALKAYE--LVFDAVYTPRNTRLLREAA 476
+ G +I++ ASA ++ NSD + K A +V D Y P T LL A
Sbjct: 1499 DNGPAPTVIVSTVPASATSLDSSNSDAILLTKSLFSAPTGGVVIDMAYKPAETPLLVLAR 1558
Query: 477 EVGATV--VSGVEMFIRQALGQFRLFTGGLAPE 507
GA V GVE+ + Q QF L+TG AP+
Sbjct: 1559 NTGAQWRRVKGVEVLLEQGYHQFHLWTGRQAPK 1591
>gi|319938856|ref|ZP_08013220.1| shikimate dehydrogenase [Streptococcus anginosus 1_2_62CV]
gi|319811906|gb|EFW08172.1| shikimate dehydrogenase [Streptococcus anginosus 1_2_62CV]
Length = 284
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 90/288 (31%), Positives = 141/288 (48%), Gaps = 33/288 (11%)
Query: 233 INPDTKIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLV--DDVKEFFRTYSGTDFA 290
I+ T++ +V+NP+ HS P +HN AF T NG+YV + DD+K +
Sbjct: 3 IDGYTRLAAVVANPIKHSISPFIHNAAFEQTGVNGVYVAWEISQDDLKATVENIRRYNMF 62
Query: 291 GFSVGIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALR 350
G ++ +P+K+ + DEV P A+ IGAVNT++ + GKL+GYNTD + ++ +
Sbjct: 63 GINLSMPYKQAVIPFLDEVTPAAQMIGAVNTVVNQ--HGKLIGYNTDGKGFFMSLPSFV- 119
Query: 351 ERQGINGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGA-RVIIFNR--NYER-AKAL 406
I GK V++GAGGA A+ A GA + +F R ++ER ++ +
Sbjct: 120 --------------ITGKKMVMLGAGGAATAIIIQAVLDGAEEIFVFTRQSSFERVSQKM 165
Query: 407 ADAVSGEALHFEYL----HEFFPEK---GMILANASAIGMEPNSDQSPVPKEA-LKAYEL 458
+ A L E EK +L N +++GM+ + P+P L L
Sbjct: 166 KEIQQKTAAKIWVLPLENQELLQEKINVSALLVNGTSLGMDGKA--LPIPSSIRLPHSLL 223
Query: 459 VFDAVYTPRNTRLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAP 506
V D +Y P T L+ A VV+G+ M + QA F+L+TG P
Sbjct: 224 VADVIYQPFETPFLKWAKGQDVEVVNGLGMLLYQAAEAFKLWTGKEMP 271
>gi|449123706|ref|ZP_21760028.1| shikimate 5-dehydrogenase [Treponema denticola OTK]
gi|448943959|gb|EMB24841.1| shikimate 5-dehydrogenase [Treponema denticola OTK]
Length = 493
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 128/517 (24%), Positives = 218/517 (42%), Gaps = 51/517 (9%)
Query: 8 SLLVCTQLECETTEEMQASIEQAKVEGADLVELCIDSMEFSHISEVDKLIQHPTLPAIVS 67
S VC L +T E+ +++E+ K + D+ EL +D + S I + + +P I++
Sbjct: 2 STKVCLVLTEKTIEKNLSALEKYK-KFIDIAELRVDYLNQSEILYLRNFPERAGIPCILT 60
Query: 68 YRLKSS--RKSSDEACKNTCLQVLRRAL-----DLDVEFVEMDYEVASDPLMSEIIYSRS 120
R KS + E + T + R L D F +D E D E
Sbjct: 61 VRRKSDGGNFTGGEGARMT---IFARGLAFANADPIKNFSYIDLESDFDSSGIEEAARAF 117
Query: 121 NTKIIVSSYLNGGGKPTTEKLGDVIACMQATGADVMKLEIAVDSITDLAPVFE--MLTHC 178
+ KII S + K + + + + D+ KL + + D++ +F+ L
Sbjct: 118 DIKIIRSLH----SKVPVKNIVKTVEGLSRFETDIPKLAFTANCLNDVSELFKASKLIKN 173
Query: 179 QVPLIALAVGSRGLISQLLGPKFGGFLVYGSL-----GGKSVPGLPTLVSLKQVYQLEHI 233
Q ++++ +G GL S++L K +VY K L +L+++Y I
Sbjct: 174 QEYILSV-MGPYGLSSRILSKKLNSQIVYTFTPEYIKKNKLEQALIDPETLEELYGFSKI 232
Query: 234 NPDTKIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLVDDVKEFFRTYSGTDFAGFS 293
+ +T ++G++ V S P +HN F+ N +Y+P+ KE + G S
Sbjct: 233 DEETSLYGVIGKDVNTSLSPQIHNKGFKRKNLNSVYIPISAVSSKEALDFANLLKIKGLS 292
Query: 294 VGIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALRE-- 351
V P K + + + +K IGAVNT++ + K GYNTD + A+ + L E
Sbjct: 293 VTAPFKSEIIPLINSISEASKFIGAVNTLVAE--NKKWFGYNTDVDGFQQALMEFLNEKD 350
Query: 352 -RQGINGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGARVIIFNRNYERAKALADAV 410
R+ + V+ G + IFNR E+AK +A+
Sbjct: 351 LRKYKVAIIGAGGAARAVAEVISSLHG--------------KACIFNRTAEKAKNIAEKY 396
Query: 411 SGEA-----LHFEYLHEFFPEKGMILANASAIGMEPNSDQSPVPKEALKAYELVFDAVYT 465
+ ++ + LH F +I+ +A GMEP+ D P+ E VF+ +Y
Sbjct: 397 KFKWALLDPINIKQLHAF---SELIIQTTNA-GMEPDIDMDPLNFYTFTGKEKVFELIYR 452
Query: 466 PRNTRLLREAAEVGATVVSGVEMFIRQALGQFRLFTG 502
P T++L+ A G V +G +M QA QF+ F G
Sbjct: 453 PETTKMLKRARTAGCQVCNGYKMLEYQAYHQFKAFAG 489
>gi|312143784|ref|YP_003995230.1| shikimate 5-dehydrogenase [Halanaerobium hydrogeniformans]
gi|311904435|gb|ADQ14876.1| shikimate 5-dehydrogenase [Halanaerobium hydrogeniformans]
Length = 297
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 91/283 (32%), Positives = 132/283 (46%), Gaps = 31/283 (10%)
Query: 234 NPDTKIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLVDDVKEFFRTY----SGTDF 289
N +TK++GL+ + HS P LHN FR N IY+ ML KE Y +F
Sbjct: 7 NNETKLYGLLGKTLSHSISPSLHNTGFRDLDINAIYL-MLECKEKELLEDYIQSLKNLNF 65
Query: 290 AGFSVGIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDAL 349
G++V IP+KE + + LA+ GAVNT++ R G+L GYNTD IE+A
Sbjct: 66 GGWNVTIPYKEDIIPYLNGFSSLARDAGAVNTVLNR--RGRLTGYNTDVIGFQRQIEEA- 122
Query: 350 RERQGINGVASHTSPIAGKIFVLVGAGGAGRA-LAFGAKSRGARVIIFNRNYERAKALAD 408
G + K V++GAGGA RA +A + A V I NR E A L +
Sbjct: 123 -------GFV-----VKDKKAVVIGAGGAARAVIAALIQLNLAEVTIINRTLENAAELVE 170
Query: 409 AVSGEALHFEYLHEFFPE--------KGMILANASAIGMEPNSDQSP--VPKEALKAYEL 458
+ E+ + E ++ N + IGM N + + E + +
Sbjct: 171 LFKEKESKTEFSYAALKESEYKEDIKNADLIINTTPIGMYSNKMEKKLVINPEYINENQF 230
Query: 459 VFDAVYTPRNTRLLREAAEVGATVVSGVEMFIRQALGQFRLFT 501
V D +Y P T LL+EA + GA + +G+ I QA F+L+T
Sbjct: 231 VLDLIYNPLKTELLKEAEKKGAQIGNGLPTLIYQAEAAFKLWT 273
>gi|260438487|ref|ZP_05792303.1| shikimate dehydrogenase [Butyrivibrio crossotus DSM 2876]
gi|292809076|gb|EFF68281.1| shikimate dehydrogenase [Butyrivibrio crossotus DSM 2876]
Length = 286
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 86/294 (29%), Positives = 141/294 (47%), Gaps = 30/294 (10%)
Query: 233 INPDTKIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLV--DDVKEFFRTYSGTDFA 290
++ T++ L+ NPVGHS P++HN N Y V D + E D
Sbjct: 1 MDAKTRLCCLIGNPVGHSLSPMIHNTLADELGINLCYTAFKVEKDRLHEAVAGADAFDIL 60
Query: 291 GFSVGIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALR 350
G +V +PHK + ++ PLA IGAVNT++R +DG GYNTD AI + L
Sbjct: 61 GMNVTVPHKCEIIKELSDIDPLAARIGAVNTLVR--VDGGYKGYNTD---AIGLYRE-LE 114
Query: 351 ERQGINGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRG-ARVIIFNRNYERAKALADA 409
E I I K +++GAGGA A+ + +G A++ + NR +++AK LAD
Sbjct: 115 EENII---------IKDKEVIILGAGGASNAITYICADKGAAKIYLLNRTFDKAKKLADD 165
Query: 410 VSGEALHFEYL--------HEFFPEKGMILANASAIGMEPNSDQSPV-PKEALKAYELVF 460
V+ HF + + PE + ++ G+ P++D +P+ KE + E
Sbjct: 166 VNS---HFGDVVVPLAISDYRLIPEGKYPVIQTTSCGLYPHNDDAPIYDKEFYELVEAGV 222
Query: 461 DAVYTPRNTRLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRKLV 514
D ++ P T ++ E GA +G++M + Q + F L+ P++ K++
Sbjct: 223 DIIFNPAKTMFMKLCKESGARAYNGLKMLLYQGIAAFELWNDIKVPKNLADKIL 276
>gi|449131376|ref|ZP_21767592.1| shikimate 5-dehydrogenase [Treponema denticola SP37]
gi|448940209|gb|EMB21120.1| shikimate 5-dehydrogenase [Treponema denticola SP37]
Length = 493
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 128/517 (24%), Positives = 218/517 (42%), Gaps = 51/517 (9%)
Query: 8 SLLVCTQLECETTEEMQASIEQAKVEGADLVELCIDSMEFSHISEVDKLIQHPTLPAIVS 67
S VC L +T E+ +++E+ K + D+ EL +D + S I + + +P I++
Sbjct: 2 STKVCLVLTEKTIEKNLSALEKYK-KFIDIAELRVDYLNQSEILYLRNFPERAGIPCILT 60
Query: 68 YRLKSS--RKSSDEACKNTCLQVLRRAL-----DLDVEFVEMDYEVASDPLMSEIIYSRS 120
R KS + E + T + R L D F +D E D E
Sbjct: 61 VRRKSDGGNFTGGEGARMT---IFARGLAFANSDPIKNFSYIDLESDFDSSGIEEAARAF 117
Query: 121 NTKIIVSSYLNGGGKPTTEKLGDVIACMQATGADVMKLEIAVDSITDLAPVFE--MLTHC 178
+ KII S + K + + + + D+ KL + + D++ +F+ L
Sbjct: 118 DIKIIRSLH----SKVPVKNIVKTVEGLSRFETDIPKLAFTANCLNDVSELFKASKLIKN 173
Query: 179 QVPLIALAVGSRGLISQLLGPKFGGFLVYGSL-----GGKSVPGLPTLVSLKQVYQLEHI 233
Q ++++ +G GL S++L K +VY K L +L+++Y I
Sbjct: 174 QEYILSV-MGPYGLSSRILSKKLNSQIVYTFTPEYIKKNKLEQALIDPETLEELYGFSKI 232
Query: 234 NPDTKIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLVDDVKEFFRTYSGTDFAGFS 293
+ +T ++G++ V S P +HN F+ N +Y+P+ KE + G S
Sbjct: 233 DEETSLYGVIGKDVNTSLSPQIHNKGFKRKNLNSVYIPISAVSSKEALDFANLLKIKGLS 292
Query: 294 VGIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALRE-- 351
V P K + + + +K IGAVNT++ + K GYNTD + A+ + L E
Sbjct: 293 VTAPFKSEIIPLINSISEASKFIGAVNTLVAE--NKKWFGYNTDVDGFQQALMEFLNEKD 350
Query: 352 -RQGINGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGARVIIFNRNYERAKALADAV 410
R+ + V+ G + IFNR E+AK +A+
Sbjct: 351 LRKYKVAIIGAGGAARAVAEVISSLHG--------------KAYIFNRTAEKAKNIAEKY 396
Query: 411 SGEA-----LHFEYLHEFFPEKGMILANASAIGMEPNSDQSPVPKEALKAYELVFDAVYT 465
+ ++ + LH F +I+ +A GMEP+ D P+ E VF+ +Y
Sbjct: 397 KFKWALLDPINIKQLHAF---SELIIQTTNA-GMEPDIDMDPLNFYTFTGKEKVFELIYR 452
Query: 466 PRNTRLLREAAEVGATVVSGVEMFIRQALGQFRLFTG 502
P T++L+ A G V +G +M QA QF+ F G
Sbjct: 453 PETTKMLKRARTAGCQVCNGYKMLEYQAYHQFKAFAG 489
>gi|336248715|ref|YP_004592425.1| shikimate 5-dehydrogenase [Enterobacter aerogenes KCTC 2190]
gi|334734771|gb|AEG97146.1| shikimate 5-dehydrogenase [Enterobacter aerogenes KCTC 2190]
Length = 287
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 87/300 (29%), Positives = 149/300 (49%), Gaps = 30/300 (10%)
Query: 231 EHINPDTKIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLVDD--VKEFFRTYSGTD 288
E + T++ GL++ P+ HS P +HN AF H + Y+ VD+ +K+ + +
Sbjct: 3 ERLTGHTELIGLIATPIRHSMSPTMHNEAFAHLGLDYAYLAFEVDNQELKDVVQGFRALK 62
Query: 289 FAGFSVGIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDA 348
G++V +P+K D++ P A+ +GAVNT++ +G L G+ TD + A+ +A
Sbjct: 63 LRGYNVSMPNKTEICQYLDKLSPAAQLVGAVNTVVND--NGVLTGHITDGTGYMRALSEA 120
Query: 349 LRERQGINGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGARVI-IFNR------NYE 401
GI+ I GK ++GAGGA A++ A G + I IFNR N E
Sbjct: 121 -----GID--------IIGKKMTILGAGGAATAISVQAALDGVKAISIFNRKDKFFANAE 167
Query: 402 RAKALADAVSGEALHFEYLHEFFP-----EKGMILANASAIGMEPNSDQSPVPKEA-LKA 455
+ A + +H L + + +IL NA+ +GM+P Q +P ++ L+
Sbjct: 168 QTVAKIRDNTDCEIHLFDLDDHDKLRAEIDSSVILTNATGVGMKPFEGQMLLPNDSFLRP 227
Query: 456 YELVFDAVYTPRNTRLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRKLVL 515
+V D VY PR T LL A + G ++G+ M + Q F ++TG P ++++ ++
Sbjct: 228 DLIVSDVVYNPRKTYLLEVAEKKGCRTLNGLGMMLWQGARAFEIWTGKEMPVEYVKSILF 287
>gi|449541458|gb|EMD32442.1| hypothetical protein CERSUDRAFT_161831 [Ceriporiopsis subvermispora
B]
Length = 1621
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 134/527 (25%), Positives = 224/527 (42%), Gaps = 50/527 (9%)
Query: 27 IEQAKVEGADLVELCIDSM----EFSHI-----------SEVDKLIQHPTLPAIVSYRLK 71
IEQ G D VEL +D + +F + +V L LP + + R
Sbjct: 1109 IEQLTA-GVDAVELRVDLLRSPKDFDKLGPYVPSVAYVTDQVAALRSKTDLPIVFTVRTV 1167
Query: 72 SSRKSSDEACKNTCLQVLRRALDLDVEFVEMDYEVASDPLMSEIIYSRSNTKIIVSSYLN 131
S + + + A+ L VE+V+++ S+ + +++ + +++I+ S +
Sbjct: 1168 SQGGQFPDDAEKEAFTLFHTAIRLGVEYVDVEI-TWSEKSIQDLVVRKGHSQIVASWHDW 1226
Query: 132 GGGKPTTEKLGDVIACMQATGADVMKLEIAVDSITDLAPVFEMLTHCQV-----PLIALA 186
G K+ + + D++KL + + D ++ + + P+IA+
Sbjct: 1227 SGNMAWDGKVVEAKYRIAHAFGDIVKLVGKANELDDSLALYRFVQRMRASSDAKPIIAIN 1286
Query: 187 VGSRGLISQLLGPKFGGFLVYGSLGGKSVPGLPTLVSLKQVYQLEHINPDTKIFGLVSNP 246
+G+ G +S++L F + + L K+ PG + ++ L P + F L NP
Sbjct: 1287 MGTEGQLSRILNSTFSP-VSHPLLPSKAAPGQLSFAQIQTALNLIGQLPARRFF-LFGNP 1344
Query: 247 VGHSKGPILHNPAFRHTRFNGIYVPMLVDDVKEFFRTYSGTDFAGFSVGIPHKEPAVACC 306
+ HS P LHN F Y + + + E T + +DF G SV IP K +
Sbjct: 1345 IKHSMSPTLHNTGFEILGLPHKYELLETETIGEIKATLASSDFGGASVTIPFKLDVLPLL 1404
Query: 307 DEVHPLAKSIGAVNTII-RRPIDGK--LVGYNTDCESAISAIEDALRERQGINGVASHTS 363
D + P A++IGAVNTII +R DG L G NTD +I A+ S
Sbjct: 1405 DALSPEAEAIGAVNTIIPQRKADGSCILYGDNTDWLGISRSIRTAMP--------TSMKH 1456
Query: 364 PIAGKIFVLVGAGGAGRALAFGAKSRGA-RVIIFNRNYERAKALADAVSGEALHFEYLHE 422
P A +++GAGG RA + G R+ +FNR A+ LA+A +
Sbjct: 1457 PEAA---LVIGAGGTSRAAIYALHKLGVQRIYLFNRTRRSAEVLANAFPDVEVEILETLG 1513
Query: 423 FFPEKG----MILAN--ASAIGMEP---NSDQSPVPKEALKAYELVFDAVYTPRNTRLLR 473
+P G +I++ ASA +P N+ P+ +V D Y P T LL
Sbjct: 1514 TWPAGGPAPTIIVSTVPASATTTDPSVKNALYLPISMFESATGGVVVDMAYKPAETPLLA 1573
Query: 474 EAAEVG--ATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRKLVLEQF 518
A G V GV++ + Q QF+L+TG P+ + + V +
Sbjct: 1574 LAENQGDQWKTVKGVQVLLEQGYEQFQLWTGRRCPKATVAERVWSAY 1620
>gi|256811286|ref|YP_003128655.1| shikimate 5-dehydrogenase [Methanocaldococcus fervens AG86]
gi|256794486|gb|ACV25155.1| shikimate 5-dehydrogenase [Methanocaldococcus fervens AG86]
Length = 282
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 101/296 (34%), Positives = 158/296 (53%), Gaps = 27/296 (9%)
Query: 233 INPDTKIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVP--MLVDDVKEFFRTYSGTDFA 290
I+ TK+ GL+ +PV HS PI+HN AF+ N +YV +L +++K
Sbjct: 2 IDAKTKVIGLIGHPVEHSFSPIMHNAAFKDKGLNYVYVAFDVLPENLKYVIDGAKALGIV 61
Query: 291 GFSVGIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALR 350
GF+V IPHK + DE+ A+ IGAVNTI + +GK +GYNTD A A+E+ +
Sbjct: 62 GFNVTIPHKIEIMKYLDEIDRDAQLIGAVNTI--KIENGKAIGYNTDGIGARKALEEEIG 119
Query: 351 ERQGINGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGARVIIFNRNYERAKALADAV 410
E + GK V+ GAGGA RA+AF ++ +II NR E+A+ LA +
Sbjct: 120 E-------------VKGKNIVIYGAGGAARAVAFDL-AKDNNIIIANRTVEKAEKLAREI 165
Query: 411 S-------GEALHFEYLHEFFPEKGMILANASAIGMEPNSDQSPVPK-EALKAYELVFDA 462
+ GE + F L+ + +++ NA+ IGM PN D P+ K + L+ +V D
Sbjct: 166 AEKLNKKFGEEIKFGGLNVDLDDIDVVI-NATPIGMYPNVDVEPIVKADKLREDMVVMDL 224
Query: 463 VYTPRNTRLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRKLVLEQF 518
+Y P T LL+EA + A ++G+ M I Q F+++TG + M+ ++++
Sbjct: 225 IYNPLETVLLKEAKKANAKAINGLGMLIYQGAVAFKIWTGVEPNIEVMKNAIIDKI 280
>gi|448377077|ref|ZP_21560001.1| shikimate 5-dehydrogenase [Halovivax asiaticus JCM 14624]
gi|445656303|gb|ELZ09141.1| shikimate 5-dehydrogenase [Halovivax asiaticus JCM 14624]
Length = 291
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 117/301 (38%), Positives = 148/301 (49%), Gaps = 39/301 (12%)
Query: 238 KIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLVDD--VKEFFRTYSGTDFAGFSVG 295
++GL+ NPVGHS P +H A+ + YV D + + R AG +V
Sbjct: 2 DVYGLLGNPVGHSLSPPMHEAAYEACEMDATYVTFEPDRDALGDAIRGAGSLGIAGLNVT 61
Query: 296 IPHKEPAVACCDEVHP--LAKSIGAVNTI---------------IRRPIDGKLVGYNTDC 338
IP KE A+ D V P LA IGAVNTI + RP G+NTD
Sbjct: 62 IPFKEGAI---DHVEPDELAARIGAVNTIAFPEPDAAGADDRDAVARP-----TGHNTDA 113
Query: 339 ESAISAIEDALRERQGINGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGARVIIFNR 398
A+ A LRER G A + G V+VGAGGAGRA+AFG GA V + NR
Sbjct: 114 AGAVRA----LRER----GFADRDDSLDGATAVVVGAGGAGRAIAFGLAEAGATVRVVNR 165
Query: 399 NYERAKALADAVSGEALH-FEYLHEFFPEKGMILANASAIGMEPNSDQSPVPKEALKAYE 457
ERA +LA V + H + L +L NA+++GME SD+S VP EAL
Sbjct: 166 TVERATSLASEVPDASGHGLDGLPTLL-AGATVLVNATSVGME--SDESIVPTEALHEDL 222
Query: 458 LVFDAVYTPRNTRLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRKLVLEQ 517
+V DAVY PR TRLLR+A GAT V G M + Q F +TG AP M + +
Sbjct: 223 VVMDAVYRPRETRLLRDATAAGATAVDGTWMLLYQGAAAFERWTGRDAPVAAMGQALRSS 282
Query: 518 F 518
F
Sbjct: 283 F 283
>gi|291551354|emb|CBL27616.1| shikimate dehydrogenase [Ruminococcus torques L2-14]
Length = 293
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 99/305 (32%), Positives = 145/305 (47%), Gaps = 34/305 (11%)
Query: 231 EHINPDTKIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLV--DDVKEFFRTYSGTD 288
+ I T + L+ +PVGHS P ++N FR+ + Y+ + D V
Sbjct: 3 QRIKGTTGLLALIGSPVGHSGSPDMYNFCFRYHNLDYSYMAFDIKEDQVPAALDAMRLFK 62
Query: 289 FAGFSVGIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDA 348
G +V +P K A DE+ P A+ IGAVNTI+ +GKL+G+ TD I +E+
Sbjct: 63 MRGCNVTMPCKTAAAQNMDELSPAARIIGAVNTIVNE--NGKLIGHMTD---GIGFVEN- 116
Query: 349 LRERQGINGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGARVI-IFNRN---YERAK 404
LR+ H + GK V++GAGGA A+ GA I IFN + +RAK
Sbjct: 117 LRD---------HGVDVKGKKLVILGAGGAATAIQVQCALDGATSISIFNPDDPFLDRAK 167
Query: 405 ALADAVSGEALHFEY----------LHEFFPEKGMILANASAIGMEPNSDQSPVP-KEAL 453
A + E L E EK IL N + +GM+P+ D+SP+ K
Sbjct: 168 GTAAKLKNEVPDCNVQVFCLDDPGKLKEEI-EKADILVNGTLVGMKPHEDRSPITDKSVF 226
Query: 454 KAYELVFDAVYTPRNTRLLREAAEVG-ATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRK 512
++ +V D VY P T+LLREA E G A + G M + Q + ++L+TG P + +K
Sbjct: 227 RSDLIVCDVVYNPEETKLLREAKEAGCAKTIGGKGMLLWQGVAAYKLYTGLDMPVEEYKK 286
Query: 513 LVLEQ 517
E
Sbjct: 287 YQAEN 291
>gi|365902310|ref|ZP_09440133.1| shikimate 5-dehydrogenase [Lactobacillus malefermentans KCTC 3548]
Length = 293
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 90/304 (29%), Positives = 149/304 (49%), Gaps = 37/304 (12%)
Query: 231 EHINPDTKIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLVDDVK-----EFFRTYS 285
E ++ T + GL++ P+ HS P +HN AF N Y+ + + K + RT
Sbjct: 3 ERLDGHTLLIGLMAYPIRHSMSPTMHNNAFAKLGLNFAYLAFEITNEKLPGAIDAIRTL- 61
Query: 286 GTDFAGFSVGIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAI 345
D G ++ +P+K+ + D++ P + IGAVNT++ +G L GY TD + ++
Sbjct: 62 --DMRGSNISMPNKQKVIPLLDKLDPATEMIGAVNTVVND--NGVLTGYTTDGIGFMKSL 117
Query: 346 EDALRERQGINGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGARVI-IFNRN---YE 401
D +G++ I GK L GAGGA +A A G + I IFNR+ ++
Sbjct: 118 AD-----EGLD--------IRGKKMTLAGAGGAATPMAIQAALDGVKEISIFNRHDEFFD 164
Query: 402 RAKALADAVSGEALHFEYLHEFFPEKGM--------ILANASAIGMEPNSDQSPVPK-EA 452
AK D ++ + LHE + I A+A+++GM P DQ+ V
Sbjct: 165 NAKRNVDIINEKTDCKATLHELEDQDDFKKEIASSYIYADATSVGMNPLQDQTLVTDPTW 224
Query: 453 LKAYELVFDAVYTPRNTRLLREAAEVGAT-VVSGVEMFIRQALGQFRLFTGGLAPEDFMR 511
++VFD VY PR+T+L+ A + G V +G+ M + Q F+L+T P D++R
Sbjct: 225 FSEDQIVFDTVYAPRDTKLMAVAEKAGVKHVFNGLGMMLEQGAAAFKLWTKKDMPVDYIR 284
Query: 512 KLVL 515
+++
Sbjct: 285 EILF 288
>gi|359457721|ref|ZP_09246284.1| shikimate 5-dehydrogenase [Acaryochloris sp. CCMEE 5410]
Length = 292
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 88/305 (28%), Positives = 144/305 (47%), Gaps = 44/305 (14%)
Query: 237 TKIFGLVSNPVGHSKGPILHNPAFR------HTRFNGIYVPMLV--DDVKEFFRTYSGTD 288
TK+ G++ +PV HS P++HN A + H +Y+P V + + +
Sbjct: 8 TKLLGVMGHPVEHSLSPVMHNAALQALATQQHRFLEYVYIPFPVTANALPAVVSSLRELG 67
Query: 289 FAGFSVGIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDA 348
GF++ IPHK+ + E +AK++GAVNT+ P D G NTD E +S ++
Sbjct: 68 CCGFNITIPHKQAIMPLLTETTAIAKAVGAVNTV--WPTDDGWAGTNTDVEGFLSPLQPL 125
Query: 349 LRERQGINGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGA-RVIIFNRNYERAKAL- 406
R+ I ++G GGA RA+ G G +V + R + + L
Sbjct: 126 NRDWSTITPC-------------ILGCGGAARAVLAGCAQLGCPQVHMIGRQPAKLEHLK 172
Query: 407 ---ADAVSGE-ALH-FEYLHEFFPEKGMILANASAIGMEPNSDQSPV--------PKEAL 453
A A+S + +H +E L P+ +++ N + +GM P+ SP+ P+EA+
Sbjct: 173 STCATALSIDIQIHLWEDLAPLLPQAALLI-NTTPVGMSPHIQASPLSGAEIDQLPQEAI 231
Query: 454 KAYELVFDAVYTPRNTRLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRKL 513
V+D +YTP T LL++ G ++GVEM ++Q L+ AP D MR+
Sbjct: 232 -----VYDLIYTPNPTVLLKQTQASGRIAITGVEMLVQQGAAALSLWIDQPAPVDIMREA 286
Query: 514 VLEQF 518
+L F
Sbjct: 287 LLACF 291
>gi|449115970|ref|ZP_21752430.1| shikimate 5-dehydrogenase [Treponema denticola H-22]
gi|449119976|ref|ZP_21756363.1| shikimate 5-dehydrogenase [Treponema denticola H1-T]
gi|449122373|ref|ZP_21758713.1| shikimate 5-dehydrogenase [Treponema denticola MYR-T]
gi|448948129|gb|EMB28967.1| shikimate 5-dehydrogenase [Treponema denticola MYR-T]
gi|448948596|gb|EMB29430.1| shikimate 5-dehydrogenase [Treponema denticola H1-T]
gi|448955456|gb|EMB36223.1| shikimate 5-dehydrogenase [Treponema denticola H-22]
Length = 493
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 128/517 (24%), Positives = 218/517 (42%), Gaps = 51/517 (9%)
Query: 8 SLLVCTQLECETTEEMQASIEQAKVEGADLVELCIDSMEFSHISEVDKLIQHPTLPAIVS 67
S VC L +T E+ +++E+ K + D+ EL +D + S I + + +P I++
Sbjct: 2 STKVCLVLTEKTIEKNLSALEKYK-KFIDIAELRVDYLNQSEILYLRNFPERAGIPCILT 60
Query: 68 YRLKSS--RKSSDEACKNTCLQVLRRAL-----DLDVEFVEMDYEVASDPLMSEIIYSRS 120
R KS + E + T + R L D F +D E D E
Sbjct: 61 VRRKSDGGNFTGGEGARMT---IFARGLAFANSDPIKNFSYIDLESDFDSSGIEEAARAF 117
Query: 121 NTKIIVSSYLNGGGKPTTEKLGDVIACMQATGADVMKLEIAVDSITDLAPVFE--MLTHC 178
+ KII S + K + + + + D+ KL + + D++ +F+ L
Sbjct: 118 DIKIIRSLH----SKVPVKNIVKTVEGLSRFETDIPKLAFTANCLNDVSELFKASKLIKN 173
Query: 179 QVPLIALAVGSRGLISQLLGPKFGGFLVYGSL-----GGKSVPGLPTLVSLKQVYQLEHI 233
Q ++++ +G GL S++L K +VY K L +L+++Y I
Sbjct: 174 QEYILSV-MGPYGLSSRILSNKLNSQIVYTFTPEYIKKNKLEQALIDPETLEELYGFSKI 232
Query: 234 NPDTKIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLVDDVKEFFRTYSGTDFAGFS 293
+ +T ++G++ V S P +HN F+ N +Y+P+ KE + G S
Sbjct: 233 DEETSLYGVIGKDVNTSLSPQIHNKGFKRKNLNSVYIPISAVSSKEALDFANLLKIKGLS 292
Query: 294 VGIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALRE-- 351
V P K + + + +K IGAVNT++ + K GYNTD + A+ + L E
Sbjct: 293 VTAPFKSEIIPLINSISEASKFIGAVNTLVAE--NKKWFGYNTDVDGFQQALMEFLNEKD 350
Query: 352 -RQGINGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGARVIIFNRNYERAKALADAV 410
R+ + V+ G + IFNR E+AK +A+
Sbjct: 351 LRKYKVAIIGAGGAARAVAEVISSLHG--------------KACIFNRTAEKAKNIAEKY 396
Query: 411 SGEA-----LHFEYLHEFFPEKGMILANASAIGMEPNSDQSPVPKEALKAYELVFDAVYT 465
+ ++ + LH F +I+ +A GMEP+ D P+ E VF+ +Y
Sbjct: 397 KFKWALLDPINIKQLHAF---SELIIQTTNA-GMEPDIDMDPLNFYTFTGKEKVFELIYR 452
Query: 466 PRNTRLLREAAEVGATVVSGVEMFIRQALGQFRLFTG 502
P T++L+ A G V +G +M QA QF+ F G
Sbjct: 453 PETTKMLKRARTAGCQVCNGYKMLEYQAYHQFKAFAG 489
>gi|251780363|ref|ZP_04823283.1| shikimate dehydrogenase [Clostridium botulinum E1 str. 'BoNT E
Beluga']
gi|243084678|gb|EES50568.1| shikimate dehydrogenase [Clostridium botulinum E1 str. 'BoNT E
Beluga']
Length = 289
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 94/300 (31%), Positives = 148/300 (49%), Gaps = 32/300 (10%)
Query: 231 EHINPDTKIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLV--DDVKEFFRTYSGTD 288
E I T++ GL++ P+ HS P +HN AF + Y+ V + +++ + +
Sbjct: 3 ERITGHTELIGLIATPIRHSSSPKMHNEAFAKLGLDYAYLAFEVGTEQLEDTIKGFRAMS 62
Query: 289 FAGFSVGIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDA 348
G +V +P+K D++ P A+ GAVNT++ DG L G+ TD + A++DA
Sbjct: 63 VRGCNVSMPNKTVVHKYLDKLSPAAELCGAVNTVVND--DGVLTGHITDGIGYMRALKDA 120
Query: 349 LRERQGINGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRG-ARVIIFNRNYE---RA- 403
GIN PI GK +VGAGGA A+ A G A + IFNR E RA
Sbjct: 121 -----GIN-------PI-GKKMTIVGAGGAATAIEIQAALDGVAEISIFNRKDEFFARAE 167
Query: 404 --------KALADAVSGEALHFEYLHEFFPEKGMILANASAIGMEPNSDQSPVPKEA-LK 454
K A + + + L E + + NA+ +GM+P ++ +P + L+
Sbjct: 168 KTVKDINEKTNCKATLYDLANLDKLKEEIADS-YLFTNATGMGMKPLEGKTYIPDSSFLR 226
Query: 455 AYELVFDAVYTPRNTRLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRKLV 514
+ +V D VY PR T LLR A EVG V+G+ M + Q F ++TG P ++M+ ++
Sbjct: 227 SDLIVSDVVYAPRETELLRMAREVGCKTVNGLGMMLFQGAAAFEMWTGKEMPIEYMKDIL 286
>gi|229918236|ref|YP_002886882.1| shikimate 5-dehydrogenase [Exiguobacterium sp. AT1b]
gi|259585281|sp|C4L3U2.1|AROE_EXISA RecName: Full=Shikimate dehydrogenase
gi|229469665|gb|ACQ71437.1| shikimate 5-dehydrogenase [Exiguobacterium sp. AT1b]
Length = 261
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 89/281 (31%), Positives = 134/281 (47%), Gaps = 34/281 (12%)
Query: 240 FGLVSNPVGHSKGPILHNPAFRHTRFNGIY--VPMLVDDVKEFFRTYSGTDFAGFSVGIP 297
++ +P+ HS P LH R + G Y + D + F D+ GF+V IP
Sbjct: 3 LAVIGHPIAHSLSPQLHEQWLRASGLFGRYEAIDATPDQLPALFAAMREGDWDGFNVTIP 62
Query: 298 HKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALRERQGING 357
+KE V D++ AK GAVNT+ +R DG+L+G NTD + A+ R +
Sbjct: 63 YKEVVVRYLDDLDEAAKHAGAVNTVYKR--DGRLIGTNTDGAGLVQALMPYTDFRGHV-- 118
Query: 358 VASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGARVIIFNRNYERAKALADAVSGEALHF 417
++VGAGGA R + +R V I NR ERAKALAD F
Sbjct: 119 -------------LIVGAGGAARGIVQALPTRD--VTIVNRTVERAKALADT-------F 156
Query: 418 EYLHEFFPEKGM----ILANASAIGMEPNSDQSPVPKEALKAYELVFDAVYTPRNTRLLR 473
++ F E + ++ +++GM+ S +P+ E L+ +V D +Y P T +L+
Sbjct: 157 GVVYTTFDEMDVSRYDVIIQTTSVGMDERS--TPLSLEGLRQNTVVCDIIYRPLVTPMLQ 214
Query: 474 EAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRKLV 514
EA GA +V+GV MF+ Q F +TG E +KL+
Sbjct: 215 EAKSRGANIVTGVAMFVGQGALSFEKWTGVKPDETVGKKLI 255
>gi|145219354|ref|YP_001130063.1| shikimate dehydrogenase [Chlorobium phaeovibrioides DSM 265]
gi|189046318|sp|A4SDK2.1|AROE_PROVI RecName: Full=Shikimate dehydrogenase
gi|145205518|gb|ABP36561.1| shikimate dehydrogenase [Chlorobium phaeovibrioides DSM 265]
Length = 290
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 105/310 (33%), Positives = 148/310 (47%), Gaps = 49/310 (15%)
Query: 233 INPDTKIFGLVSNPVGHSKGPILHNPAF-------RHTRFNGIYVPMLVDDVKEFFRTYS 285
+ P TKI+GL+ V +S P++HN AF R+T FN I LV D + R
Sbjct: 1 MRPATKIYGLIGRAVDYSYSPLIHNTAFEQLSLPCRYTIFN-ITEEHLVADALKGARALG 59
Query: 286 GTDFAGFSVGIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAI 345
AGFSV IP+K+ V D + AKSI AVNTI+ +G LVG+NTD
Sbjct: 60 ---LAGFSVTIPYKKTVVPLLDSLSEEAKSIQAVNTIVNH--EGTLVGHNTD-------- 106
Query: 346 EDALRERQGINGVAS----HTSPIAGKIFVLVGAGGAGRAL--AFGAKSRGARVIIFNRN 399
I G AS H I G+ ++G+GGA A AF + + +F RN
Sbjct: 107 ---------IAGFASPLLPHARSIQGRPVAILGSGGASLAAIEAFRTLFMPSEITLFMRN 157
Query: 400 YERAKALAD-AVSGEALHFEYLHEFFPEKGMIL------ANASAIGM--EPNSDQSPVPK 450
+ + D A+ AL L E E +L NA+ +G P++ SPVP
Sbjct: 158 PAKETRMTDPAIKRCALG--DLRESGSESSALLRDAAVVINATPVGTLGRPDAHMSPVPA 215
Query: 451 EA--LKAYELVFDAVYTPRNTRLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPED 508
E+ L ++++D VY P +T LL A + GA + G+EM + Q FRL+T P D
Sbjct: 216 ESNLLHQGQIIYDMVYNPLDTPLLLAARKAGAVTIPGMEMLLAQGAAAFRLWTNLEMPMD 275
Query: 509 FMRKLVLEQF 518
+R +L +
Sbjct: 276 AVRSALLNEI 285
>gi|238917253|ref|YP_002930770.1| shikimate 5-dehydrogenase [Eubacterium eligens ATCC 27750]
gi|238872613|gb|ACR72323.1| shikimate 5-dehydrogenase [Eubacterium eligens ATCC 27750]
Length = 290
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 84/282 (29%), Positives = 136/282 (48%), Gaps = 31/282 (10%)
Query: 233 INPDTKIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLVD--DVKEFFRTYSGTDFA 290
I T++ GL+ NPVGHS P +HN R T + +Y V+ DV+ R +
Sbjct: 3 IKGTTRVCGLIGNPVGHSVSPAIHNNLARLTGKDMVYTTFKVEKGDVEAAVRGAYSLNIL 62
Query: 291 GFSVGIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALR 350
G +V +PHK + ++ PLAK+IGAVNT++R DG GYNTD +ED
Sbjct: 63 GLNVTVPHKSEVIDSLVDIDPLAKAIGAVNTLVRA--DGGFKGYNTDILGLARELED--- 117
Query: 351 ERQGINGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGARVI-IFNRNYERAKALADA 409
+GI +A +++GAGGA RA+ F S+GA+ I + NR+ ++A+ +A A
Sbjct: 118 --EGI--------ELADSKVIILGAGGAARAITFLCSSKGAKKIYLLNRSVDKAQDIAHA 167
Query: 410 VSGEALHFEYL---------HEFFPEKGMILANASAIGMEPNSDQSPVPKEAL-KAYELV 459
V+ HF + P I+ +++G+ PN + E+ K +
Sbjct: 168 VN---THFNNEKVIPMNIADYADIPGDDYIVIQTTSVGLHPNDTAVVIDDESFYKKAAVG 224
Query: 460 FDAVYTPRNTRLLREAAEVGATVVSGVEMFIRQALGQFRLFT 501
D +Y P T ++ G +G++M + Q + + L+
Sbjct: 225 VDIIYNPAETMFMKLIKAQGKKAYNGLKMLLYQGVSAYELWN 266
>gi|448320111|ref|ZP_21509599.1| shikimate 5-dehydrogenase [Natronococcus amylolyticus DSM 10524]
gi|445606517|gb|ELY60421.1| shikimate 5-dehydrogenase [Natronococcus amylolyticus DSM 10524]
Length = 266
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 107/281 (38%), Positives = 138/281 (49%), Gaps = 28/281 (9%)
Query: 238 KIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPM--LVDDVKEFFRTYSGTDFAGFSVG 295
++GL+ NPVGHS P +H A+ + YV D+++ R G +V
Sbjct: 2 DVYGLIGNPVGHSLSPPMHEAAYDELALDARYVTFEPAPDELEAAIRGADALGVRGLNVT 61
Query: 296 IPHKEPA--VACCDEVHPLAKSIGAVNTIIRRPIDGKL-VGYNTDCESAISAIEDALRER 352
IP K+ A V DE LA IGAVNTI G+ G+NTD A+ A+ D
Sbjct: 62 IPFKQDALEVVAADE---LATRIGAVNTI---DFSGEEPTGHNTDAAGALRALRD----- 110
Query: 353 QGINGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGARVIIFNRNYERAKALADAVSG 412
H + G V+VGAGGAGRA++FG GA V I NR A LAD V G
Sbjct: 111 --------HDVALEGADAVVVGAGGAGRAISFGLADAGAAVTIANRTESTAHELADEVPG 162
Query: 413 E-ALHFEYLHEFFPEKGMILANASAIGMEPNSDQSPVPKEALKAYELVFDAVYTPRNTRL 471
E L + +L NA+++GME D +PVP AL V DAVY P TRL
Sbjct: 163 AVGRGLEDLEALLADAD-VLVNATSVGME--EDATPVPAAALHDELAVLDAVYRPLETRL 219
Query: 472 LREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRK 512
LREA+ VGAT V G M + Q + L+T AP + M +
Sbjct: 220 LREASAVGATTVDGAWMLLYQGVEALELWTDREAPVEAMNE 260
>gi|423127377|ref|ZP_17115056.1| shikimate dehydrogenase [Klebsiella oxytoca 10-5250]
gi|376394416|gb|EHT07066.1| shikimate dehydrogenase [Klebsiella oxytoca 10-5250]
Length = 287
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 89/300 (29%), Positives = 149/300 (49%), Gaps = 30/300 (10%)
Query: 231 EHINPDTKIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLV--DDVKEFFRTYSGTD 288
E I T++ GL++ P+ HS P +HN AF H + +Y+ V +++K+ + +
Sbjct: 3 ERITGHTELIGLIATPIRHSMSPTMHNEAFAHLGLDYVYLAFEVGNEELKDVVQGFRALK 62
Query: 289 FAGFSVGIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDA 348
G +V +P+K D++ P A+ +GAVNT++ +G L G+ TD + A+++A
Sbjct: 63 LRGCNVSMPNKTEICQYLDKLSPAAELVGAVNTVVND--NGVLTGHITDGTGYMRALKEA 120
Query: 349 LRERQGINGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGARVI-IFNR------NYE 401
GI+ I GK ++GAGGA AL A G + I IFNR N E
Sbjct: 121 -----GID--------IIGKKMTVLGAGGAATALCVQAALDGVKEISIFNRKDKFFANAE 167
Query: 402 RAKALADAVSGEALHFEYLHEFFP-----EKGMILANASAIGMEPNSDQSPVPKEA-LKA 455
+ A + A+H L + + +IL NA+ +GM+P Q +P ++ L+
Sbjct: 168 QTVAKIRNNTNCAIHLFDLDDHDKLRAEIDSSVILTNATGVGMKPFEGQMLLPDDSFLRP 227
Query: 456 YELVFDAVYTPRNTRLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRKLVL 515
+V D VY PR T LL A + G ++G+ M + Q F ++TG P + ++ ++
Sbjct: 228 DLIVSDVVYNPRKTYLLEVAEKKGCRTINGLGMMLWQGARAFEIWTGKEMPVEHIKSILF 287
>gi|443321693|ref|ZP_21050737.1| shikimate 5-dehydrogenase [Gloeocapsa sp. PCC 73106]
gi|442788605|gb|ELR98294.1| shikimate 5-dehydrogenase [Gloeocapsa sp. PCC 73106]
Length = 282
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 85/293 (29%), Positives = 138/293 (47%), Gaps = 29/293 (9%)
Query: 230 LEHINPDTKIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLVD--DVKEFFRTYSGT 287
+E I TK+ G++ +P+ HS P++HN A + + +YVP V D+
Sbjct: 1 MEIITGKTKLLGVIGDPIEHSLSPVMHNAAIKALGLDYVYVPFAVKSADLGGAIAGLQAI 60
Query: 288 DFAGFSVGIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIED 347
+ GF+V IPHK+ + E+ PLA+ +GA NT+ R + G NTD E ++ + +
Sbjct: 61 NCQGFNVTIPHKQAIIPFLREISPLAQMVGATNTVWREATHWQ--GTNTDVEGFLAPLRE 118
Query: 348 ALRERQGINGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGARVI-IFNRNYERAKAL 406
R I K VL G GGA RA+ K G I + RN ++ L
Sbjct: 119 IERPWHEI------------KPLVL-GYGGAARAVVVALKRLGCPEIRVVGRNLQK---L 162
Query: 407 ADAVSGEALHFEY----LHEFFPEKGMILANASAIGMEPNSDQSPVPKEALKAYE---LV 459
AD + + Y L E PE +++ N + +GM P++D SP+ + + +V
Sbjct: 163 ADFAANWSEITSYDSSCLPELLPETELLI-NTTPVGMYPDTDASPIESSLIGLIQPGAIV 221
Query: 460 FDAVYTPRNTRLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRK 512
+D +Y P T+LL E + G + G+EM + Q ++ P + MR+
Sbjct: 222 YDLIYIPNPTKLLLETQKQGVIALDGLEMLVNQGAIALGIWLQRPLPVEIMRQ 274
>gi|55377558|ref|YP_135408.1| shikimate 5-dehydrogenase [Haloarcula marismortui ATCC 43049]
gi|448659449|ref|ZP_21683304.1| shikimate 5-dehydrogenase [Haloarcula californiae ATCC 33799]
gi|74553014|sp|Q5V450.1|AROE_HALMA RecName: Full=Shikimate dehydrogenase
gi|55230283|gb|AAV45702.1| shikimate 5-dehydrogenase [Haloarcula marismortui ATCC 43049]
gi|445760390|gb|EMA11653.1| shikimate 5-dehydrogenase [Haloarcula californiae ATCC 33799]
Length = 265
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 105/286 (36%), Positives = 138/286 (48%), Gaps = 27/286 (9%)
Query: 238 KIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYV----PMLVDDVKEFFRTYSGTDFAGFS 293
++GL+ NPVGHS P +H + + YV P G D G +
Sbjct: 2 DVYGLIGNPVGHSLSPPMHEAGYEALGLDARYVTFEPPADAGAEAIEAAETLGVD--GLN 59
Query: 294 VGIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALRERQ 353
V IP K+ + D PLA+ IGAVNT+ G GYNTD A+ A++
Sbjct: 60 VTIPFKQDVLDAVDPA-PLAERIGAVNTVDF--TGGTPTGYNTDAVGAVRALD------- 109
Query: 354 GINGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGARVIIFNRNYERAKALADAVSGE 413
H V+VGAGGAGRA+AFG G V I NR +A ALAD V
Sbjct: 110 -------HHDVSLSGTAVVVGAGGAGRAVAFGLADEGLSVRIANRTESKADALADEVPDA 162
Query: 414 ALH-FEYLHEFFPEKGMILANASAIGMEPNSDQSPVPKEALKAYELVFDAVYTPRNTRLL 472
+ H + L + IL N +++GME D++PVP +AL + V DAVYTP TRLL
Sbjct: 163 SGHGLDSLSDLL-ANADILVNCTSVGME--EDKTPVPADALHSDLAVLDAVYTPIETRLL 219
Query: 473 REAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRKLVLEQF 518
++AA GAT V G M + Q + F +TG AP D M + E
Sbjct: 220 QDAAAAGATTVDGAWMLLYQGVEAFERWTGEDAPVDRMNGRLREHL 265
>gi|322420004|ref|YP_004199227.1| shikimate 5-dehydrogenase [Geobacter sp. M18]
gi|320126391|gb|ADW13951.1| shikimate 5-dehydrogenase [Geobacter sp. M18]
Length = 290
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 97/290 (33%), Positives = 141/290 (48%), Gaps = 26/290 (8%)
Query: 233 INPDTKIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLV--DDVKEFFRTYSGTDFA 290
I T + G++ PV HS P+LHN AF+ + IYVP + + + E A
Sbjct: 3 ITGKTTVTGIIGWPVSHSLSPVLHNAAFKALGLDWIYVPFPIAPERLAEGICGLKAIGVA 62
Query: 291 GFSVGIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALR 350
GFSV IPHK + DEV P A+ IGAVNT++ + G+L GYNTD I+A+ L
Sbjct: 63 GFSVTIPHKVAIIPLLDEVTPEAELIGAVNTVVAK--HGRLTGYNTDGIGLIAALAAKLD 120
Query: 351 ERQGINGVASHTSPIAGKIFVLVGAGGAGR-ALAFGAKSRGARVIIFNRNYERAKALADA 409
GK +++GAGGA R A+ A + ARV I NR+ A ALAD
Sbjct: 121 CDP------------KGKSVLVLGAGGAARSAVVSLAGAGAARVEIANRSLAAATALADL 168
Query: 410 VSGEALHFEYLH---EFFPEKGMI-----LANASAIGMEPNSDQSPVPKEALKAYELVFD 461
V G + + G + + N +++GM +S + +ALK+ ++D
Sbjct: 169 VEGRLPQTSFAARPLSVLSDAGFLGSFDLVVNTTSVGMAGDSFPG-LSLKALKSGACIYD 227
Query: 462 AVYTPRNTRLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMR 511
VY P T LL +A +G +G+ M + Q FR++TG P+ M
Sbjct: 228 MVYAPPVTPLLAQAEALGIPCANGLGMLVAQGEAAFRIWTGATPPQGCME 277
>gi|390439798|ref|ZP_10228167.1| Shikimate dehydrogenase [Microcystis sp. T1-4]
gi|389836782|emb|CCI32291.1| Shikimate dehydrogenase [Microcystis sp. T1-4]
Length = 302
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 84/306 (27%), Positives = 147/306 (48%), Gaps = 27/306 (8%)
Query: 225 KQVYQLEHINPDTKIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLV--DDVKEFFR 282
K + + IN TK+ G++ +P+GH+ P +HN A N +Y+P+ + +++
Sbjct: 12 KPTFFMTIINGKTKLLGVIGDPIGHTLSPPMHNAAIDALGLNYVYLPLPIATENLATAIA 71
Query: 283 TYSGTDFAGFSVGIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAI 342
S D GFSV IPHK + ++ A+ +GAVNT+ R + G NTD + +
Sbjct: 72 GLSAIDLEGFSVTIPHKLAIIPLLSQITEKARLVGAVNTVWRTETGWQ--GTNTDVDGFL 129
Query: 343 SAIEDALRERQGINGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRG-ARVIIFNRNYE 401
+ ++ ++ +N V ++G GGA RA+ G + + RN +
Sbjct: 130 APLKSLDKDWSQVNPV-------------ILGNGGAARAVVVACAQLGCGEIHVVGRNQK 176
Query: 402 RAKALADAVSGEALH-FEYLHEFFPEKGMI-----LANASAIGMEPNSDQSPVPKEALKA 455
+ ++ + +L+ +H + +GM+ L N++ IGM P +QSPV E L
Sbjct: 177 KLDPFKESWANTSLYDLLEVHSWDELEGMLPTTELLINSTPIGMSPQGEQSPVELELLDL 236
Query: 456 YE---LVFDAVYTPRNTRLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRK 512
+ +D +Y PR T+ LR A G ++ G+EM + Q ++ G P MR+
Sbjct: 237 LPPSAIAYDLIYNPRPTKFLRLAQTRGIRIIDGLEMLVNQGAIALEIWLGQPVPVSVMRE 296
Query: 513 LVLEQF 518
+L+QF
Sbjct: 297 ALLKQF 302
>gi|315281073|ref|ZP_07869790.1| shikimate 5-dehydrogenase [Listeria marthii FSL S4-120]
gi|313615282|gb|EFR88710.1| shikimate 5-dehydrogenase [Listeria marthii FSL S4-120]
Length = 291
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 85/300 (28%), Positives = 146/300 (48%), Gaps = 30/300 (10%)
Query: 231 EHINPDTKIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLVDD--VKEFFRTYSGTD 288
E I T++ GL++ P+ HS P +HN AF + +Y+ V D +K+ R + +
Sbjct: 7 ERITGHTELIGLIATPIRHSLSPTMHNEAFAKLGLDYVYLAFEVGDKELKDVVRGFRAMN 66
Query: 289 FAGFSVGIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDA 348
G++V +P+K D++ P A+ +GAVNT++ DG L G+ TD + A+++A
Sbjct: 67 LRGWNVSMPNKTNIHKYLDKLSPAAELVGAVNTVVND--DGVLTGHITDGTGYMRALKEA 124
Query: 349 LRERQGINGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGARVI-IFNRN---YERAK 404
+ I GK + GAGGA A+ A G + I IFNR Y A+
Sbjct: 125 GHD-------------IIGKKMTICGAGGAATAICIQAALDGVKEISIFNRKDDFYANAE 171
Query: 405 ALADAVSGEA------LHFEYLHEFFPE--KGMILANASAIGMEPNSDQSPVPK-EALKA 455
+ ++ + E + E + +I NA+ +GM+P ++ +P + L+
Sbjct: 172 KTVEKINSKTDCKAQLFDIEDHEQLRKEIAESVIFTNATGVGMKPFEGETLLPSADMLRP 231
Query: 456 YELVFDAVYTPRNTRLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRKLVL 515
+V D VY P TRLL A E G ++G+ M + Q F ++T P D++++++
Sbjct: 232 ELIVSDVVYKPTKTRLLEIAEEQGCQTLNGLGMMLWQGAKAFEIWTHKEMPVDYIKEILF 291
>gi|238854373|ref|ZP_04644715.1| shikimate dehydrogenase [Lactobacillus jensenii 269-3]
gi|260665066|ref|ZP_05865916.1| shikimate 5-dehydrogenase [Lactobacillus jensenii SJ-7A-US]
gi|313472984|ref|ZP_07813471.1| shikimate dehydrogenase [Lactobacillus jensenii 1153]
gi|238832995|gb|EEQ25290.1| shikimate dehydrogenase [Lactobacillus jensenii 269-3]
gi|239528824|gb|EEQ67825.1| shikimate dehydrogenase [Lactobacillus jensenii 1153]
gi|260561120|gb|EEX27094.1| shikimate 5-dehydrogenase [Lactobacillus jensenii SJ-7A-US]
Length = 307
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 93/300 (31%), Positives = 149/300 (49%), Gaps = 37/300 (12%)
Query: 237 TKIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLVDDVK-----EFFRTYSGTDFAG 291
T + GL++ P+ HS P +HN AF N Y+ +D+ K E RT D G
Sbjct: 20 TYLIGLMAYPIRHSMSPTMHNNAFAKLGLNFTYLCFEIDNKKLPKAVEAIRTL---DMRG 76
Query: 292 FSVGIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALRE 351
+V +P+K+ + D++ P ++ AVNTI+ +G L GY TD + ++ED
Sbjct: 77 SNVSMPNKKEVIKYLDKLSPASEMCDAVNTIVND--NGVLTGYTTDGIGFMKSLED---- 130
Query: 352 RQGINGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGARVI-IFNRNYER-------A 403
+GI+ I GK L GAGGA +A A G I IFN N ++
Sbjct: 131 -EGID--------IRGKKMCLAGAGGAATPIAVQAALDGVSEIEIFNLNDDKWAQAEKNV 181
Query: 404 KALADAVSGEAL--HFEYLHEFFP--EKGMILANASAIGMEPNSDQSPVPKEALKAYEL- 458
K + + + +A H E +F + I +A+ +GM+P D + V + ++
Sbjct: 182 KTINEKTNCKASLHHLEDKDDFKRAISECDIYCDATGVGMKPLEDMTLVEDPSWFHEDMT 241
Query: 459 VFDAVYTPRNTRLLREAAEVGAT-VVSGVEMFIRQALGQFRLFTGGLAPEDFMRKLVLEQ 517
VFD VY PR T+L++ A + G V++G+ M I Q + F+L+TG P D++R+++ E
Sbjct: 242 VFDTVYAPRTTKLMKVAQKAGVKHVLNGIGMMIEQGVAAFKLWTGKDMPTDYIREVIFEN 301
>gi|449107487|ref|ZP_21744141.1| shikimate 5-dehydrogenase [Treponema denticola ASLM]
gi|451969179|ref|ZP_21922408.1| shikimate 5-dehydrogenase [Treponema denticola US-Trep]
gi|448961687|gb|EMB42382.1| shikimate 5-dehydrogenase [Treponema denticola ASLM]
gi|451702047|gb|EMD56481.1| shikimate 5-dehydrogenase [Treponema denticola US-Trep]
Length = 493
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 128/517 (24%), Positives = 218/517 (42%), Gaps = 51/517 (9%)
Query: 8 SLLVCTQLECETTEEMQASIEQAKVEGADLVELCIDSMEFSHISEVDKLIQHPTLPAIVS 67
S VC L +T E+ +++E+ K + D+ EL +D + S I + + +P I++
Sbjct: 2 STKVCLVLTEKTIEKNLSALEKYK-KFIDIAELRVDYLNQSEILYLRNFPERAGIPCILT 60
Query: 68 YRLKSS--RKSSDEACKNTCLQVLRRAL-----DLDVEFVEMDYEVASDPLMSEIIYSRS 120
R KS + E + T + R L D F +D E D E
Sbjct: 61 VRRKSDGGNFTGGEGARMT---IFARGLAFANSDPIKNFSYIDLESDFDSSGIEEAARAF 117
Query: 121 NTKIIVSSYLNGGGKPTTEKLGDVIACMQATGADVMKLEIAVDSITDLAPVFE--MLTHC 178
+ KII S + K + + + + D+ KL + + D++ +F+ L
Sbjct: 118 DIKIIRSLH----SKVPIKNIVKTVEGLSRFETDIPKLAFTANCLNDVSELFKASKLIKN 173
Query: 179 QVPLIALAVGSRGLISQLLGPKFGGFLVYGSL-----GGKSVPGLPTLVSLKQVYQLEHI 233
Q ++++ +G GL S++L K +VY K L +L+++Y I
Sbjct: 174 QEYILSV-MGPYGLSSRILSNKLNSQIVYTFTPEYIKKNKLEQALIDPETLEELYGFSKI 232
Query: 234 NPDTKIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLVDDVKEFFRTYSGTDFAGFS 293
+ +T ++G++ V S P +HN F+ N +Y+P+ KE + G S
Sbjct: 233 DEETSLYGVIGKDVNTSLSPQIHNKGFKRKNLNSVYIPISAVSSKEALDFANLLKIKGLS 292
Query: 294 VGIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALRE-- 351
V P K + + + +K IGAVNT++ + K GYNTD + A+ + L E
Sbjct: 293 VTAPFKSEIIPLINSISEASKFIGAVNTLVAE--NKKWFGYNTDVDGFQQALMEFLNEKD 350
Query: 352 -RQGINGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGARVIIFNRNYERAKALADAV 410
R+ + V+ G + IFNR E+AK +A+
Sbjct: 351 LRKYKVAIIGAGGAARAVAEVISSLHG--------------KACIFNRTAEKAKNIAEKY 396
Query: 411 SGEA-----LHFEYLHEFFPEKGMILANASAIGMEPNSDQSPVPKEALKAYELVFDAVYT 465
+ ++ + LH F +I+ +A GMEP+ D P+ E VF+ +Y
Sbjct: 397 KFKWALLDPINIKQLHAF---SELIIQTTNA-GMEPDIDMDPLNFYTFTGKEKVFELIYR 452
Query: 466 PRNTRLLREAAEVGATVVSGVEMFIRQALGQFRLFTG 502
P T++L+ A G V +G +M QA QF+ F G
Sbjct: 453 PETTKMLKRARTAGCQVCNGYKMLEYQAYHQFKAFAG 489
>gi|242238828|ref|YP_002987009.1| quinate/shikimate dehydrogenase [Dickeya dadantii Ech703]
gi|242130885|gb|ACS85187.1| Shikimate dehydrogenase substrate binding domain protein [Dickeya
dadantii Ech703]
Length = 289
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 94/291 (32%), Positives = 143/291 (49%), Gaps = 32/291 (10%)
Query: 238 KIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLVDDVKEFFRTYSGTD---FAGFSV 294
++ GL++ P+ HS P + N A Y+ VD+ + F G G V
Sbjct: 8 ELIGLMAYPIRHSLSPEMQNKALDKEGLPYTYMAFEVDN-ESFPMAIEGLKALKMRGTGV 66
Query: 295 GIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALRERQG 354
+P+K+ A DE+ P A+ +GA+NTI+ +G L GYNTD I AI+++ G
Sbjct: 67 SMPNKQLACEYVDELTPAARLVGAINTIVND--NGYLKGYNTDGTGHIRAIKES-----G 119
Query: 355 INGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGARVI-IFNRN---YERAKALADAV 410
+ I GK VLVGAGGA A+ A G + I +FNR YE+A A V
Sbjct: 120 FD--------IKGKTMVLVGAGGASTAIGAQAAIEGIKAIKLFNRKDEFYEKALDFAKRV 171
Query: 411 SGEALHFEYLHEFFPEKGM--------ILANASAIGMEPNSDQSPVP-KEALKAYELVFD 461
+ +H+ ++ IL N + +GM+P ++SPV K L+ LV +
Sbjct: 172 NENTDCTVTVHDLGDQQAFADAIATADILTNGTKLGMKPLENESPVTDKTMLRPELLVTE 231
Query: 462 AVYTPRNTRLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRK 512
VY P T+LL+ A +VG V G M + Q QF+L+TG P +++++
Sbjct: 232 CVYNPHITKLLQMAQDVGCKTVDGYGMLLWQGAEQFKLWTGKDFPLEYIKE 282
>gi|443318685|ref|ZP_21047931.1| shikimate 5-dehydrogenase [Leptolyngbya sp. PCC 6406]
gi|442781693|gb|ELR91787.1| shikimate 5-dehydrogenase [Leptolyngbya sp. PCC 6406]
Length = 308
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 85/292 (29%), Positives = 139/292 (47%), Gaps = 16/292 (5%)
Query: 233 INPDTKIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLVDD--VKEFFRTYSGTDFA 290
I T++ G++ +P+ HS P + N A R ++GIYVP V V
Sbjct: 10 ITGKTQVLGIIGDPIAHSLSPPMQNAALRALGWDGIYVPFPVRAAAVDTALAGLWALGVV 69
Query: 291 GFSVGIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALR 350
GF+V IPHK+ +A EV PLA+++GAVNT+ R+ + G NTD ++ ++D
Sbjct: 70 GFNVTIPHKQAVMAALAEVTPLAQAVGAVNTVWRQ--EQGWAGTNTDVLGFVAPLQDWGH 127
Query: 351 ERQ-GINGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGARVIIFNRNYERAKALADA 409
E + +A H + +L G A A+A ++ + + R+ + ++ A++
Sbjct: 128 EALVPESSLAGHLPWSQRRAVILGNGGAARAAVAGCSQLHCGEIWVVGRDRNKLQSFAES 187
Query: 410 VSGEAL-------HFEYLHEFFPEKGMILANASAIGMEPNSDQSPV-PKE--ALKAYELV 459
L ++ L PE +L N + +GM P DQSPV P++ L + +
Sbjct: 188 WQDSPLCPTLQVASWDQLPALLPET-TLLVNTTPLGMHPREDQSPVSPQDLAQLPSDAIA 246
Query: 460 FDAVYTPRNTRLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMR 511
+D +YTP T+ LR A E G + GVEM ++Q ++ P MR
Sbjct: 247 YDLIYTPSPTQFLRWATERGLHTIDGVEMLVQQGAAALEIWIHQPPPIAVMR 298
>gi|365838921|ref|ZP_09380176.1| shikimate dehydrogenase [Anaeroglobus geminatus F0357]
gi|364566130|gb|EHM43830.1| shikimate dehydrogenase [Anaeroglobus geminatus F0357]
Length = 292
Score = 122 bits (307), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 84/300 (28%), Positives = 153/300 (51%), Gaps = 30/300 (10%)
Query: 231 EHINPDTKIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLVDD--VKEFFRTYSGTD 288
E + T++ GL++ P+ HS P +HN AF+ + +YV VD+ +++ +
Sbjct: 8 ERVTGHTELIGLIAYPIRHSMSPTMHNEAFKKLGLDYVYVCFEVDNSTLEDTVKGLRAMK 67
Query: 289 FAGFSVGIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDA 348
G++V +P+K P D++ P+++ +GA NT++ +G L G TD A+ ++++
Sbjct: 68 VRGWNVSMPNKGPITRYLDKLSPVSQIVGACNTVVND--NGVLTGTITDGTGAMQSLKE- 124
Query: 349 LRERQGINGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGAR-VIIFNRNYE---RAK 404
+G++ V GK+ V VGAGGA A+ A GA+ + +FNR E +A+
Sbjct: 125 ----EGVDYVG-------GKMTV-VGAGGAATAIIVQAALDGAKEITVFNRRDEFFPKAE 172
Query: 405 ALADAVSGEALHFEYLHEFFPEKGM--------ILANASAIGMEPNSDQSPVPKEALKAY 456
+ ++ L++ + + I + ++ GM+P D +P ++
Sbjct: 173 KVVAQLNDRTDCKVTLYDLADHENLKRELDSSDIYIDGTSCGMKPLEDVVAIPDKSYLHK 232
Query: 457 EL-VFDAVYTPRNTRLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRKLVL 515
EL V D VY PR T+L+R A EVG +G+ M + Q F+L+TG P D+++ ++
Sbjct: 233 ELIVMDTVYAPRETKLMRWAEEVGCHTFNGLGMMLYQGAAAFKLWTGKDMPVDYIKDILF 292
>gi|312127119|ref|YP_003991993.1| shikimate 5-dehydrogenase [Caldicellulosiruptor hydrothermalis 108]
gi|311777138|gb|ADQ06624.1| shikimate 5-dehydrogenase [Caldicellulosiruptor hydrothermalis 108]
Length = 281
Score = 122 bits (307), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 89/286 (31%), Positives = 141/286 (49%), Gaps = 30/286 (10%)
Query: 238 KIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLVDD---VKEFFR-TYSGTDFAGFS 293
K+F L+ + HS P +HN + IY + + D +KEF D GF+
Sbjct: 3 KLF-LIGKSLKHSISPFIHNTILSEFDIDAIYSNLELSDTEKLKEFVEMVRKDKDVVGFN 61
Query: 294 VGIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALRERQ 353
+ IP+KE + CDEV + I A NT+ + DGK + YNTD ++ED R
Sbjct: 62 ITIPYKEDILEFCDEVSEDVRIIKAANTVKKE--DGKFLAYNTDWIGFKKSLED----RG 115
Query: 354 GINGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGAR-VIIFNRNYERAKAL----AD 408
G + K +++G+GGA +A +G GA+ V I NR YE+A+AL +
Sbjct: 116 G---------DVKDKKILILGSGGAAKACIYGLYRMGAKEVFIANRTYEKAQALRQQYKE 166
Query: 409 AVSGEALHFEYLHEFFPEKGMILANASAIGMEPNSDQSPVPKEALKAYELVFDAVYTPRN 468
V + + + + + IL N + IGM P+ D SP+ ELV+D +Y P
Sbjct: 167 IVDLKIIKWSEIENVSYD---ILINTTPIGMYPDVDISPINTLNFTV-ELVYDMIYNPYK 222
Query: 469 TRLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRKLV 514
T+LL+ A G +++G+ M I QA+ +++ G+ P+ M L+
Sbjct: 223 TKLLQLAEINGKKILNGLPMLIYQAIEAEKIWF-GIEPDKEMVSLI 267
>gi|289522730|ref|ZP_06439584.1| shikimate dehydrogenase [Anaerobaculum hydrogeniformans ATCC
BAA-1850]
gi|289504566|gb|EFD25730.1| shikimate dehydrogenase [Anaerobaculum hydrogeniformans ATCC
BAA-1850]
Length = 290
Score = 122 bits (307), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 85/298 (28%), Positives = 153/298 (51%), Gaps = 27/298 (9%)
Query: 234 NPDTKIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLV---DDVKEFFRTYSGTDFA 290
N DT+ + NP+ + P+LHN F + N +Y P+ + +D+ + +T +
Sbjct: 5 NADTRYVVIFGNPLKQTLSPLLHNTVFESKKMNNLYYPLEIQSLEDLSKALKTMHVFNVI 64
Query: 291 GFSVGIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALR 350
G +V +P+KE + D + A+ GAVNTI+ + L+GYNTD +++ +
Sbjct: 65 GANVTMPYKEKVIELLDGLDKSAEQCGAVNTIVT--TEKGLIGYNTDGMGFLNSFMEE-- 120
Query: 351 ERQGINGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRG-ARVIIFNRNYERAKALADA 409
S+ SP GK +L+GAGGA +A+ F + G ++VI++N + RA +L +
Sbjct: 121 ---------SNVSP-EGKTLLLIGAGGAAKAVVFAFLNAGVSKVIVYNNSQTRAMSLVER 170
Query: 410 VS----GEALHFEYLHEFFPEKGM----ILANASAIGMEPNSD-QSPVPKEALKAYELVF 460
V G++ ++ P +G+ I+ NA+ +GM+ ++ QS V ++ + + V
Sbjct: 171 VEKFFPGKSEWRPLNNKPVPPEGIAEADIIINATKVGMKGEAEGQSLVLPDSFRPGQFVC 230
Query: 461 DAVYTPRNTRLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRKLVLEQF 518
D VY P T+LL ++ + G +SG M + QA F+L+ G + + M++ F
Sbjct: 231 DVVYNPPETKLLADSKKAGCKTLSGDGMLVYQAAAAFKLWFGVDSDLELMKRTFRNYF 288
>gi|288800100|ref|ZP_06405559.1| shikimate dehydrogenase [Prevotella sp. oral taxon 299 str. F0039]
gi|288333348|gb|EFC71827.1| shikimate dehydrogenase [Prevotella sp. oral taxon 299 str. F0039]
Length = 247
Score = 122 bits (307), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 82/267 (30%), Positives = 132/267 (49%), Gaps = 28/267 (10%)
Query: 240 FGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLVDDVKEFFRTY-SGTDFAGFSVGIPH 298
+GL+ +GHS N F++ + +Y+ + ++++ F S D G +V IP+
Sbjct: 4 YGLIGLKLGHSFSLNYFNEKFKNENIDAVYINYEISNIQDIFEIIASNPDLKGLNVTIPY 63
Query: 299 KEPAVACCDEVHPLAKSIGAVNT--IIRRPIDGKLVGYNTDCESAISAIEDALRERQGIN 356
KE + DEV P A +IGAVN II + L G+N+D +IE L ER
Sbjct: 64 KEQIIPYLDEVTPEATAIGAVNVVKIIHQENKTILKGFNSDVVGFTQSIE-PLLER---- 118
Query: 357 GVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGARVIIFNRNYERAKALADAVSGEALH 416
K +++G GG+ +A+AFG +S G V+ +R + A+ EA
Sbjct: 119 ---------VHKKALILGTGGSAKAIAFGLESLGLEVLFVSRT-PQVNAITYNEVTEATI 168
Query: 417 FEYLHEFFPEKGMILANASAIGMEPNSDQSP-VPKEALKAYELVFDAVYTPRNTRLLREA 475
EY ++ N + +GM PNSD P +P EA+ + L++D +Y P T +++
Sbjct: 169 KEY---------KVIVNCTPLGMYPNSDSYPELPYEAMDSSHLLYDLIYNPNETTFMKKG 219
Query: 476 AEVGATVVSGVEMFIRQALGQFRLFTG 502
A GATV +G+EM + QA + + G
Sbjct: 220 AMHGATVKNGLEMLLLQAFVSWEYWHG 246
>gi|384495000|gb|EIE85491.1| hypothetical protein RO3G_10201 [Rhizopus delemar RA 99-880]
Length = 1571
Score = 122 bits (307), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 138/529 (26%), Positives = 235/529 (44%), Gaps = 52/529 (9%)
Query: 19 TTEEMQASIEQ--AKVEGADLVELCIDSM----EFSHISEVDK-------LIQHPTLPAI 65
T++++ IE+ EGAD VEL +D + E IS+++ L + ++P I
Sbjct: 1064 TSKDLSTCIEKLVEVCEGADAVELRVDLLKKPEEKEGISDIEYVGEQLALLRRTVSIPVI 1123
Query: 66 VSYRLKSSRKSSDEACKNTCLQVLRRALDLDVEFVEMDYEVASDPLMSEIIYSRSNTKII 125
+ R KS + + + ++LR E++ D E+ + E + ++ +I
Sbjct: 1124 FTVRSKSQAGAFSDNDEEGMFELLRWGQRWGCEYI--DVEICWNAQTIEKLVAQKEESLI 1181
Query: 126 VSSYLNGGG-KPTTEKLGDVIACMQATGADVMKLEIAVDSITD--LAPVFEMLTHCQVPL 182
+SS+ + P K + + A D++KL ++I D F L
Sbjct: 1182 ISSWHDVQKVTPWDGKAIETKYELAAKYGDIIKLVGVAETIQDNFKLETFRASKQDGKNL 1241
Query: 183 IALAVGSRGLISQLLGPKFGGFLVYGSLGGKSVPGLPTLVSLKQVYQLEHINPDTKIFGL 242
IA+ +G+ G +S++L + + +L K+ PG +L + + L + P + F L
Sbjct: 1242 IAINMGAAGQLSRVLNECLTP-VTHPALPQKAAPGQLSLAEINKTRHLIGLLP-AQSFWL 1299
Query: 243 VSNPVGHSKGPILHNPAFRHTRFNGIYVPMLVDDVKEFFRTYSGTD--FAGFSVGIPHKE 300
+ P+ HS P LHN F+ Y +L + E+ D F G SV IPHK
Sbjct: 1300 IGTPIQHSMSPTLHNTGFQTLGLPHHY-GLLECHMVEYAEDAILKDPSFGGASVTIPHKV 1358
Query: 301 PAVACCDEVHPLAKSIGAVNTIIRRP--IDG----KLVGYNTDCESAISAIEDALRERQG 354
+ DEV AK IGAVNT+ R ++G + +G NTD I+ + +
Sbjct: 1359 SVMKYLDEVTENAKMIGAVNTVFVRETVVNGEKKRQFIGENTDYLGMKHRIQALMMD--- 1415
Query: 355 INGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRG-ARVIIFNRNYERAKALADAVSG- 412
+ P G +++GAGG RA + + G ++ ++NR +A L A G
Sbjct: 1416 -----PNNPPEEG---LVIGAGGTARAALYTMQKMGIQKIYLWNRTSSKAYDLQKAFKGF 1467
Query: 413 -EALHFEYLHEFFPEKGMILANASA-IGMEPNSDQSPVPKEALKAYE-LVFDAVYTPRNT 469
E E L G+I++ A G+E +P + ++ D Y PR T
Sbjct: 1468 IEIEVIESLENSKIGPGVIISTVPADSGIE-------IPAHLYGGIKGIICDMAYKPRRT 1520
Query: 470 RLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRKLVLEQF 518
+LL +A G + V G+E+ I Q + QF ++TG AP + + VL ++
Sbjct: 1521 KLLLQADRKGWSCVEGIEVLISQGIAQFEIWTGKKAPNHRIEEEVLRRY 1569
>gi|448419716|ref|ZP_21580560.1| shikimate 5-dehydrogenase [Halosarcina pallida JCM 14848]
gi|445674630|gb|ELZ27167.1| shikimate 5-dehydrogenase [Halosarcina pallida JCM 14848]
Length = 266
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 109/280 (38%), Positives = 136/280 (48%), Gaps = 27/280 (9%)
Query: 238 KIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPM--LVDDVKEFFRTYSGTDFAGFSVG 295
++FGLV NPVGHS P +H A+ + YV +D+ AG +V
Sbjct: 2 QVFGLVGNPVGHSLSPPMHEAAYDRVDMDARYVTFEPSPEDLSAAVEGAEALGIAGLNVT 61
Query: 296 IPHKEPAVACCDEVHP--LAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALRERQ 353
IP K V D V P LA IGAVNT+ DG GYNTD +
Sbjct: 62 IPFKREMV---DLVEPDELAARIGAVNTVGFG--DGPPRGYNTDAAGVRRSF-------- 108
Query: 354 GINGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGARVIIFNRNYERAKALADAVSG- 412
A H P+ G+ V+VGAGGAGRA +F GA V + NR ERA +LA V G
Sbjct: 109 -----AHHDVPLDGRSAVVVGAGGAGRAASFALADAGASVHVANRTTERATSLAADVPGA 163
Query: 413 EALHFEYLHEFFPEKGMILANASAIGMEPNSDQSPVPKEALKAYELVFDAVYTPRNTRLL 472
+ L +L NA+++GME SD++PVP E L V DAVY P TRLL
Sbjct: 164 TGGGLDTLDGL--ADADLLVNATSVGME--SDETPVPAERLHDGLAVLDAVYAPVETRLL 219
Query: 473 REAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRK 512
REAA GAT + G M + Q + F +TG AP D M
Sbjct: 220 REAAAAGATTIDGAWMLLFQGVEAFERWTGRDAPVDAMND 259
>gi|408356445|ref|YP_006844976.1| shikimate dehydrogenase [Amphibacillus xylanus NBRC 15112]
gi|407727216|dbj|BAM47214.1| shikimate dehydrogenase [Amphibacillus xylanus NBRC 15112]
Length = 276
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 84/270 (31%), Positives = 129/270 (47%), Gaps = 21/270 (7%)
Query: 240 FGLVSNPVGHSKGPILHNPAFRHTRFNGIY--VPMLVDDVKEFFRTYSGTDFAGFSVGIP 297
GL+ PV HSK P +H T G Y + + D E +D +GF+V IP
Sbjct: 3 LGLIGYPVQHSKSPWIHQHFLSETNLTGNYQLIEIHPDQFDEEIMKLKASDLSGFNVTIP 62
Query: 298 HKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALRERQGING 357
+KE + DE+ P A+ IGAVNT++ R + + G NTD ++A+++ E
Sbjct: 63 YKEKIIPYLDEISPAAQKIGAVNTVVCR--NNRWYGDNTDGRGLVTALKEQFPELF---- 116
Query: 358 VASHTSPIAGKIFVLVGAGGAGRALAFG-AKSRGARVIIFNRNYERAKALADA----VSG 412
K +++GAGGA R + + ++I NR RA+AL DA +S
Sbjct: 117 -------TGDKSVLILGAGGASRGIYYALLNEEFEEIVIANRTVIRAQALIDANPSGISS 169
Query: 413 EALHFEYLHEFFPEKGMILANASAIGMEPNSDQSPVPKEALKAYELVFDAVYTPRNTRLL 472
A+ F + +++ S +GM P+ ++ + LK +V D VY P T+LL
Sbjct: 170 AAISFSEAEAKLNQFDLVIQTTS-VGMTPHIEEQVIDLSRLKPGAVVSDIVYQPFWTKLL 228
Query: 473 REAAEVGATVVSGVEMFIRQALGQFRLFTG 502
R+A G V G EM I QA F +++G
Sbjct: 229 RDAKARGGRVHHGHEMLIYQAKLAFEMWSG 258
>gi|347759215|ref|YP_004866777.1| shikimate 5-dehydrogenase [Micavibrio aeruginosavorus ARL-13]
gi|347591733|gb|AEP10775.1| shikimate 5-dehydrogenase [Micavibrio aeruginosavorus ARL-13]
Length = 280
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 87/296 (29%), Positives = 153/296 (51%), Gaps = 34/296 (11%)
Query: 237 TKIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLV--DDVKEFFRTYSGTDFAGFSV 294
T+ GL+ +PV HS P++H + R +G Y + + DD+ R + GF+V
Sbjct: 2 TRKTGLIGHPVSHSLSPVIHTHWLQQYRIDGTYTAIDIAPDDLSTRVRALVDDGYVGFNV 61
Query: 295 GIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPID--GKLVGYNTDCESAISAIEDALRER 352
+PHKE CD++ A+++GAVNT+ ID G+L G+NTD + I+ ++ ++ +
Sbjct: 62 TLPHKEEIAFLCDDLDDTAQAVGAVNTVT---IDNRGRLHGHNTDVDGFINHLKSSVPDF 118
Query: 353 QGINGVASHTSPIAGKIFVLVGAGGAGRALAFG-AKSRGARVIIFNRNYERAKALADAVS 411
++GK V++GAGGA RA+ + + + + NR ERA A+A+ +
Sbjct: 119 H-----------LSGKHAVVLGAGGAARAVLYALLREDFEWITLINRTRERAVAVANDLD 167
Query: 412 GEALHFEYLHEFFPEKGMILA------NASAIGMEPNSDQSPVPKE--ALKAYELVFDAV 463
+ L + ++G LA N +++GM + Q+P+ + L +V+D V
Sbjct: 168 DDG---RVLIVDWEKRGGALADTDLLVNTTSLGM---TGQAPLDMDVGGLSPNAVVYDIV 221
Query: 464 YTPRNTRLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAP-EDFMRKLVLEQF 518
Y P T LL++A G T+V+G+ M + QA F + G + +D + +V+E+
Sbjct: 222 YRPLMTPLLQQAKMRGNTIVTGLGMLLHQARPAFDAWYGVMPHVDDELESIVMERL 277
>gi|345004585|ref|YP_004807438.1| shikimate dehydrogenase [halophilic archaeon DL31]
gi|344320211|gb|AEN05065.1| Shikimate dehydrogenase [halophilic archaeon DL31]
Length = 268
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 106/283 (37%), Positives = 140/283 (49%), Gaps = 30/283 (10%)
Query: 238 KIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLVDDVKEFFRTYSGTD---FAGFSV 294
+++GLV +PV HS P +H A+ + YV L D ++G D AG +V
Sbjct: 2 QVYGLVGSPVEHSLSPPMHEAAYEELGLDARYV-TLEPDADRLDEAFAGADALGVAGLNV 60
Query: 295 GIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALRERQG 354
+P K+ A+A E P A+++GA+NTI P VGYNTD +
Sbjct: 61 TVPFKQDALAHV-EPSPTAEAVGAINTIDFGP--ETPVGYNTDVSGVTRSF--------- 108
Query: 355 INGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGARVIIFNRNYERAKALAD-----A 409
A H I G V+VGAGGAGRA A+ GA V + NR ERA LA
Sbjct: 109 ----AHHDVTIDGSSAVVVGAGGAGRAAAYALADTGATVHVANRTVERATELATTFSEFG 164
Query: 410 VSGEALHFEYLHEFFPEKGMILANASAIGMEPNSDQSPVPKEALKAYELVFDAVYTPRNT 469
V+G L L P+ +++ NA+++GME D SPVP L V DAVY P T
Sbjct: 165 VTGAGLG--SLESTVPDADLVV-NATSVGME--EDASPVPAALLHEDLAVLDAVYAPLET 219
Query: 470 RLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRK 512
RLLR+AA VGAT + G M + Q + F +TG AP D M
Sbjct: 220 RLLRDAAAVGATTIDGAWMLLYQGVEAFERWTGETAPVDVMND 262
>gi|448305207|ref|ZP_21495140.1| shikimate 5-dehydrogenase [Natronorubrum sulfidifaciens JCM 14089]
gi|445589485|gb|ELY43717.1| shikimate 5-dehydrogenase [Natronorubrum sulfidifaciens JCM 14089]
Length = 269
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 112/287 (39%), Positives = 142/287 (49%), Gaps = 25/287 (8%)
Query: 238 KIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLVDDVKEFFRTYSGTD---FAGFSV 294
IFGL+ NPVGHS P +H A+ + YV + G D G +V
Sbjct: 2 DIFGLLGNPVGHSLSPPMHEAAYDQLGLDARYV-TFEPEPAALEAAIDGADALGITGLNV 60
Query: 295 GIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALRERQG 354
IP K+ + D LA IGAVNTI DG G+NTD A+ A+ D
Sbjct: 61 TIPFKQDVLEFVD-ADELATRIGAVNTIDFTG-DGTPTGHNTDAVGAMRALRD------- 111
Query: 355 INGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGARVIIFNRNYERAKALADAV---S 411
H + G V+VGAGGAGRA+AFG GA V I NR A LA+AV +
Sbjct: 112 ------HDVTLEGADAVVVGAGGAGRAIAFGLADAGATVEIANRTESTAHDLAEAVPGAT 165
Query: 412 GEALHFEYLHEFFPEKGMILANASAIGMEPNSDQSPVPKEALKAYELVFDAVYTPRNTRL 471
G L L + E IL NA+++GME SD++PVP +AL V DAVY P TRL
Sbjct: 166 GHGLEAGALADLLAEAD-ILVNATSVGME--SDETPVPADALHGELAVMDAVYQPLETRL 222
Query: 472 LREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRKLVLEQF 518
L++AA VGAT V G M + Q + F L+ G P D M + + Q
Sbjct: 223 LQDAAAVGATTVDGAWMLLYQGVEAFELWAGEEPPVDAMNEALRSQL 269
>gi|260886325|ref|ZP_05897588.1| shikimate dehydrogenase [Selenomonas sputigena ATCC 35185]
gi|260864044|gb|EEX78544.1| shikimate dehydrogenase [Selenomonas sputigena ATCC 35185]
Length = 311
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 92/275 (33%), Positives = 141/275 (51%), Gaps = 24/275 (8%)
Query: 237 TKIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYV--PMLVDDVKEFFRTYSGTDFAGFSV 294
TK ++ +P+GHS P + N A R + YV P+L + +++ R F GF+V
Sbjct: 21 TKNLAVIGSPIGHSLSPAMQNAAIRAVGLDYAYVALPVLPERLEDGVRGLRALGFRGFNV 80
Query: 295 GIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALRERQG 354
IPHK + DEV A++IGAVNT++ G+L G+NTD E + A+
Sbjct: 81 TIPHKSAILPLLDEVDEAARAIGAVNTVVCEA--GRLKGFNTDVEGFLGAL--------- 129
Query: 355 INGVASHTSPIAGKIFVLVGAGGAGRALAFGA-KSRGARVIIFNRNYERAKALAD--AVS 411
A+ + GK VL+GAGGA RA +G +S A V + RN +A++LA+ A
Sbjct: 130 ----AARGFSVEGKRVVLLGAGGAARAALYGLLRSGAAEVTLGVRNAPKARSLAEEFAQY 185
Query: 412 GEALHFEYLHEFFPE---KGMILANASAIGMEPNSD-QSPVPKEALKAYELVFDAVYTPR 467
GE ++ F E K ++ N + +GM P + PVP +A+ +D +YTP
Sbjct: 186 GEVCALDWNEAAFEEAVRKAALVVNTTPLGMAPQTQAMPPVPWQAVHERTFFYDIIYTPA 245
Query: 468 NTRLLREAAEVGATVVSGVEMFIRQALGQFRLFTG 502
T+ L+ A +G ++G M + Q FRL+TG
Sbjct: 246 KTQFLQRAESLGCPTLNGEAMLVGQGAAAFRLWTG 280
>gi|302674061|ref|XP_003026716.1| hypothetical protein SCHCODRAFT_83545 [Schizophyllum commune H4-8]
gi|300100400|gb|EFI91813.1| hypothetical protein SCHCODRAFT_83545 [Schizophyllum commune H4-8]
Length = 1635
Score = 122 bits (306), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 131/442 (29%), Positives = 198/442 (44%), Gaps = 39/442 (8%)
Query: 97 VEFVEMDYEVASDPLMSEIIYSRSNTKIIVSSYLNGGGKPTTEKLGDVIA--CMQATGAD 154
VE+++++ + SD + +++ ++ ++I S + G DV A AT D
Sbjct: 1209 VEYIDVEISLPSDHI-HQLVKNKGYAQLIASWHDWTGA--MRWDGADVAAKYAQAATFGD 1265
Query: 155 VMKLEIAVDSITD-LAPVFEMLTHCQVPLIALAVGSRGLISQLLGPKFGGFLVYGSLGGK 213
++K+ +++ D LA + H + PLIAL +G G +S++LG F + + L K
Sbjct: 1266 IVKIVGKANALEDNLALLDFARAHDRKPLIALNMGEAGQMSRVLGTCFVP-VSHPKLPFK 1324
Query: 214 SVPGLPTLVSLKQVYQLEHINPDTKIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPML 273
+ PG + ++Q L P K + L P+ HS P LHN F Y +
Sbjct: 1325 AAPGQLSFAQIQQALHLLGALPAKKFY-LFGTPIAHSMSPTLHNTGFAALGLPHTYSLLE 1383
Query: 274 VDDV-KEFFRTYSGTDFAGFSVGIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGK-- 330
V E S DF G SV IP K + DE+ AK IGAVNTII D K
Sbjct: 1384 TSTVGDEIKAAVSAPDFGGASVTIPFKLDVIPLLDELSDAAKVIGAVNTIIPIQRDSKRI 1443
Query: 331 LVGYNTDCESAISAIEDALRERQGINGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRG 390
L G NTDC +A+ L + G VL GAGG RA + + G
Sbjct: 1444 LRGDNTDCLGIQAAVTSRLAGAR------------VGSALVL-GAGGTARAAIYALHALG 1490
Query: 391 ARVI-IFNRNYERAKALADAVSGEAL----HFEYLHEFFPEKGMILA--NASAIGMEPNS 443
A I +FNR +A+ L A + + E P +I++ A+A E S
Sbjct: 1491 ASPIYLFNRTRSKAEELHAAFPNAPVLVLDKLDAWGENTPAPNVIVSCVPAAATTTEAGS 1550
Query: 444 DQSPVPKEALKAYE----LVFDAVYTPRNTRLLREAAEVGA---TVVSGVEMFIRQALGQ 496
+ +P + L A++ +V D Y P T LL+ A VG + V GVE+ + Q Q
Sbjct: 1551 EGLHLP-QGLLAHQNGPAVVVDMAYKPAETPLLQLAKAVGGEHWSTVPGVEVLLEQGFVQ 1609
Query: 497 FRLFTGGLAPEDFMRKLVLEQF 518
F L+TG P + + K V ++
Sbjct: 1610 FELWTGRACPRESVSKTVWAKY 1631
>gi|116873669|ref|YP_850450.1| shikimate 5-dehydrogenase [Listeria welshimeri serovar 6b str.
SLCC5334]
gi|116742547|emb|CAK21671.1| shikimate 5-dehydrogenase [Listeria welshimeri serovar 6b str.
SLCC5334]
Length = 289
Score = 122 bits (306), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 86/292 (29%), Positives = 144/292 (49%), Gaps = 31/292 (10%)
Query: 231 EHINPDTKIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVP--MLVDDVKEFFRTYSGTD 288
+ I+ T++ L+ P+ HSK PI++N +F + Y+ + V+ V + +
Sbjct: 3 KRISGSTRLLSLIGTPIDHSKSPIMYNYSFEKAGLDYAYLAFDIPVNKVADAITAIKTFN 62
Query: 289 FAGFSVGIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDA 348
G +V +P K + D++ P A+ IGAVNTI+ +GKL G+ TD ++ + D+
Sbjct: 63 LRGSNVTMPCKSEVLKYMDDLSPAARMIGAVNTIVNE--NGKLTGHITDGLGFVTNLRDS 120
Query: 349 LRERQGINGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGARVI-IFNRN---YERAK 404
+ ++GK ++GAGGA A+ G + I IFN YE+AK
Sbjct: 121 -------------SVDVSGKKMTIIGAGGAATAIQVQCALDGVKEIAIFNIQDDFYEKAK 167
Query: 405 ALADAVSGE----ALHFEYLHE---FFPEKGM--ILANASAIGMEPNSDQSPVPKEALKA 455
++ E ++H L + + E IL NA+ +GM P+ +++PV +
Sbjct: 168 QTVASIKEEVPECSVHIYDLSDTKKLYAEIATSDILVNATLVGMHPHENETPVKDTTVFR 227
Query: 456 YELVF-DAVYTPRNTRLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAP 506
+L+ D +YTP+ TRLL +A GA V G+ M + Q ++LFTG P
Sbjct: 228 KDLIVADIIYTPKKTRLLLDAEAAGAKTVGGLGMLLWQGAEAYKLFTGKDMP 279
>gi|227533271|ref|ZP_03963320.1| shikimate 5-dehydrogenase [Lactobacillus paracasei subsp. paracasei
ATCC 25302]
gi|227189067|gb|EEI69134.1| shikimate 5-dehydrogenase [Lactobacillus paracasei subsp. paracasei
ATCC 25302]
Length = 306
Score = 122 bits (306), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 95/298 (31%), Positives = 141/298 (47%), Gaps = 36/298 (12%)
Query: 230 LEHINPDTKIFG------LVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLV--DDVKEFF 281
+E +N +T I G L+ +PVGHS P ++N +F+ + + YV V + + E
Sbjct: 4 MEALNMETWISGATGLLCLLGSPVGHSGSPAMYNFSFQKQKIDAAYVAFDVTKEQMPEAL 63
Query: 282 RTYSGTDFAGFSVGIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESA 341
G +V +P K A DE+ P AK IGAVN ++ DGKL+G+ TD
Sbjct: 64 NAMRLFKMCGGNVTMPCKNVAATLMDELSPAAKIIGAVNVVVND--DGKLIGHITDGIGF 121
Query: 342 ISAIEDALRERQGINGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGARVI-IFNRN- 399
+ +++ H I GK V++GAGGA A+ A GA+ I IFNR
Sbjct: 122 VRNLQE-------------HEIDIKGKHLVVLGAGGAATAIQVQAALDGAKQITIFNRQD 168
Query: 400 --YERAKALAD-------AVSGEALHFEYLHEFFPE--KGMILANASAIGMEPNSDQSPV 448
Y RA++ A AV + + E IL NA+ +GM+P+ S V
Sbjct: 169 EFYSRAESTAKKLAEAAPAVKVDVVQLENTDRLKAAIADADILVNATTVGMKPDDGVSLV 228
Query: 449 PKEALKAYELVFDAVYTPRNTRLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAP 506
L+A +V D VY P T+L+ +A +VGA G M + Q ++L+TG P
Sbjct: 229 DPSFLRADLVVADTVYNPLKTKLIEDAEKVGAKTAPGKGMLLWQGAAGYQLWTGQDMP 286
>gi|365891052|ref|ZP_09429522.1| putative Shikimate dehydrogenase [Bradyrhizobium sp. STM 3809]
gi|365333035|emb|CCE02053.1| putative Shikimate dehydrogenase [Bradyrhizobium sp. STM 3809]
Length = 293
Score = 122 bits (306), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 98/283 (34%), Positives = 139/283 (49%), Gaps = 38/283 (13%)
Query: 239 IFGLVSNPVGHSKGPILHNPAFRHTRFNGIY------------VPMLVDDVKEFFRTYSG 286
+ GL+ P+ HS P +H A Y + L++ V+
Sbjct: 13 LTGLIGAPIAHSASPAMHEHAAAALGVRCHYQLIEVAGADRAGLATLLEGVRRL------ 66
Query: 287 TDFAGFSVGIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIE 346
FAG +V P+KE VA DE+ P A ++GAVNT++ R DG+L+G+NTD A+E
Sbjct: 67 -GFAGVNVTYPYKEAVVALLDELAPKAAAMGAVNTVVVR--DGRLIGHNTDTTGFERAVE 123
Query: 347 DALRERQGINGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGARVI-IFNRNYERAKA 405
L R G G++ L+GAGG G+A+AF + G + IF+ RA
Sbjct: 124 P-LISRTG------------GRVVALIGAGGVGKAIAFALANLGVSDLRIFDTERARADK 170
Query: 406 LADAV-SGEALHFEYLHEFFPEKGMILANASAIGMEPNSDQSPVPKEALKAYELVFDAVY 464
LA + +G ++ E + + + N + IGM PN +PVP L+A V DAVY
Sbjct: 171 LASLLPAGPSITVADSVEQALQGAVGVVNGTPIGMLPNRG-TPVPDHLLRADLWVADAVY 229
Query: 465 TPRNTRLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPE 507
+P T LL+ A GA V+ G E+ I QA F LFT GLAP
Sbjct: 230 SPLWTPLLKAAKAKGAQVLLGRELAIYQAADAFELFT-GLAPS 271
>gi|284929739|ref|YP_003422261.1| shikimate dehydrogenase [cyanobacterium UCYN-A]
gi|284810183|gb|ADB95880.1| shikimate dehydrogenase [cyanobacterium UCYN-A]
Length = 289
Score = 122 bits (305), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 88/301 (29%), Positives = 146/301 (48%), Gaps = 33/301 (10%)
Query: 233 INPDTKIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLVDDVKEFFRT----YSGTD 288
I TK+ G++ +PV HS P++HN + IYVP V K+ T +
Sbjct: 4 ITGKTKLLGVIGDPVKHSLSPVIHNTVISELEVDYIYVPFSV--TKKHLDTALIGLANIG 61
Query: 289 FAGFSVGIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDA 348
GF+V IPHK+ + ++ A+ IGAVNT+ D G NTD I I ++
Sbjct: 62 VVGFNVTIPHKQAILPLLCKITKTAQMIGAVNTVWHT--DEGWNGTNTD----IIGILES 115
Query: 349 LRERQGINGVASHTSPIAGKIFVLVGAGGAGRA-LAFGAKSRGARVIIFNRNYERAKALA 407
L+ +N S P+ ++G GGA +A + AK +I+ R+Y++ K
Sbjct: 116 LKP---LNCNWSKIKPM------ILGCGGAAKASIVALAKLGCTDIIVVGRSYDKLKTFK 166
Query: 408 DAVSGEALHFEYLHEF-FPE------KGMILANASAIGMEPNSDQSPVPKEALK---AYE 457
+ S F+ ++ + F E K +L NA+ +GM PN ++SP+ KE LK +
Sbjct: 167 EVWSKNKF-FDSINIYCFSELSKILHKTQLLINATPVGMSPNINKSPINKELLKKLPSKA 225
Query: 458 LVFDAVYTPRNTRLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRKLVLEQ 517
+V+D +Y+P +T LL++A +G ++G M + Q L+ P D M + +++
Sbjct: 226 IVYDLIYSPSSTMLLQDAHNLGLATMNGSTMLVYQGAASLELWLQRTIPIDLMHRSLIDY 285
Query: 518 F 518
Sbjct: 286 L 286
>gi|219117731|ref|XP_002179655.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217408708|gb|EEC48641.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 835
Score = 122 bits (305), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 131/452 (28%), Positives = 206/452 (45%), Gaps = 52/452 (11%)
Query: 102 MDYEVASDPL-MSEII---YSRSNTKIIVSSYLNGGGKPTTEKLGDVIACM---QATGAD 154
+D E A D L SE++ SR ++ I+ S ++ G T E + C ++ GA
Sbjct: 374 LDVESAWDALKTSELLDSAESRYSSLILGSHHVVGKTISTEEAVTLFQQCALDGRSHGAK 433
Query: 155 VM-------KLEIAVDSITDLAPVFEMLTHCQVPLIALAVGSRGLISQLLGPKFGGFLVY 207
V+ K +A D+ + + + ++P I+L +G +G S++L F + +
Sbjct: 434 VVLSIDDESKDRLAYDASLIASELLKSEGKPEIPNISLVLGDKGSFSRVLNLPFTP-VTH 492
Query: 208 GSLGGKSVPGLPTLVSLKQVYQLEHINPDTKIFGLVSNPVGHSKGPILHNPAFRHTRFNG 267
SL K+ PG T + L + K + ++ + + +S P +H AF T+
Sbjct: 493 ESLPFKAAPGQLTANEIMTTRLLTKVFKPKK-YAILGHNIAYSVSPQMHGAAFAATKLPH 551
Query: 268 IYVPMLVDDVKEFFRT--YSGTDFAGFSVGIPHKEPAVACCDEVHPLAKSIGAVNTIIRR 325
Y+ + V V+EF + + +F G SV IPHK+ + D + AK+IG+VNT+I R
Sbjct: 552 EYIRVDVPTVEEFVESDFFKSDEFGGTSVTIPHKQAIIPFLDVLTDAAKAIGSVNTVIAR 611
Query: 326 P--IDGK----LVGYNTDCESAISAIEDALRERQGINGVASHTSPIAGKIFVLVGAGGAG 379
+D L G NTD + + L G +S A +++GAGG
Sbjct: 612 EEFVDETFRRVLSGDNTDWRGIFNPLNRLL------GGDVDSSSDYA----LILGAGGTA 661
Query: 380 RALAFGAKSRGARVIIFNRNYERAKALADAVSGEAL--------------HFEYLHEFFP 425
RA A+ A G +++ +NR E+A LAD G + H H
Sbjct: 662 RAAAYVASELGLQIVYYNRTPEKAIELADKFGGVVVQNLDASAKNEGSLGHLLASHS--- 718
Query: 426 EKGMILANASAIGMEPNSDQSPVPKEALKAYELVFDAVYTPRNTRLLREAAEVGATVVSG 485
KG +L S + N + E +VFD Y P NTRLL +A E G +VV G
Sbjct: 719 -KGKVLVVISTLPASVNFELPTWLVEDESKKPIVFDVNYKPYNTRLLLQAEEAGCSVVRG 777
Query: 486 VEMFIRQALGQFRLFTGGLAPEDFMRKLVLEQ 517
EM Q +GQF L+TG AP M+++VL+
Sbjct: 778 SEMLWEQGIGQFELWTGRTAPYRIMKEVVLQN 809
>gi|110729183|gb|ABG88186.1| CPC-1 [Cucumis sativus]
Length = 130
Score = 122 bits (305), Expect = 5e-25, Method: Composition-based stats.
Identities = 63/119 (52%), Positives = 77/119 (64%), Gaps = 2/119 (1%)
Query: 251 KGPILHNPAFRHTRFNGIYVPMLVDDVKEFFRTYSGTDFAGFSVGIPHKEPAVACCDEVH 310
K P L+N F+ + IYVP+LVDD +F TYS +D GFSV IPHKE CDEV
Sbjct: 1 KLPALYNELFKLVGLDAIYVPLLVDDPTKFLDTYSSSDIGGFSVTIPHKEAVFKYCDEVD 60
Query: 311 PLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALRERQGINGVASHTSPIAGKI 369
P+AK+ GAVN ++RR DGKL GYNTDC AISAIED L N + +S +AGK+
Sbjct: 61 PVAKATGAVNFVLRRQSDGKLCGYNTDCYGAISAIEDGLLGLH--NDSFAVSSRLAGKL 117
>gi|254466135|ref|ZP_05079546.1| shikimate 5-dehydrogenase [Rhodobacterales bacterium Y4I]
gi|206687043|gb|EDZ47525.1| shikimate 5-dehydrogenase [Rhodobacterales bacterium Y4I]
Length = 277
Score = 122 bits (305), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 93/268 (34%), Positives = 131/268 (48%), Gaps = 17/268 (6%)
Query: 239 IFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLVD--DVKEFFRTYSGTDFAGFSVGI 296
+ G++ PV HSK P LH + R G YVPM V+ D+ E R F G +V I
Sbjct: 8 LAGVIGCPVSHSKSPQLHGHWLKTHRIAGHYVPMHVEPADLAEAIRAMPKMGFVGANVTI 67
Query: 297 PHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALRERQGIN 356
PHKE + D+V AK IGA NT+I R DG ++ NTD ++ + QG
Sbjct: 68 PHKEAVMGIADKVTDRAKLIGAANTLIFRE-DGTILADNTDGYGFVTNLH------QG-- 118
Query: 357 GVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGA-RVIIFNRNYERAKALADAVSGEAL 415
A P +G VL GAGGA RA+ G +++ NR ERA+ L
Sbjct: 119 --APDWDPQSGPAVVL-GAGGACRAVVASLIEAGVPEILLSNRTRERAEQLQKDFGNRIR 175
Query: 416 HFEYLHEFFP-EKGMILANASAIGMEPNSDQSPVPKEALKAYELVFDAVYTPRNTRLLRE 474
E+L E+G ++ N +++GM + VP + L++ +V D +Y P T LL
Sbjct: 176 VVEWLQAGNAIEEGRLIVNTTSLGMV-GKPRLRVPLDGLRSDAVVTDLIYAPLKTGLLET 234
Query: 475 AAEVGATVVSGVEMFIRQALGQFRLFTG 502
A E G TVV G+ M + QA+ F + G
Sbjct: 235 AEEAGCTVVDGLGMLLHQAVPGFERWFG 262
>gi|258507559|ref|YP_003170310.1| shikimate 5-dehydrogenase [Lactobacillus rhamnosus GG]
gi|385827263|ref|YP_005865035.1| shikimate 5-dehydrogenase [Lactobacillus rhamnosus GG]
gi|257147486|emb|CAR86459.1| Shikimate 5-dehydrogenase [Lactobacillus rhamnosus GG]
gi|259648908|dbj|BAI41070.1| shikimate 5-dehydrogenase [Lactobacillus rhamnosus GG]
Length = 289
Score = 122 bits (305), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 94/289 (32%), Positives = 145/289 (50%), Gaps = 30/289 (10%)
Query: 233 INPDTKIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLV--DDVKEFFRTYSGTDFA 290
I+ T++ L+ +PVGHS P ++N +F+ + + YV V D + + +
Sbjct: 5 ISGTTQLLCLLGSPVGHSGSPAMYNFSFQKQKIDAAYVAFDVKEDQMPDALKAMRLFRMR 64
Query: 291 GFSVGIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALR 350
G +V +P K A DE+ P AK IGAVN I+ +G+L+G+ TD I + + L+
Sbjct: 65 GGNVTMPCKNVAATLMDELSPAAKIIGAVNVIVNE--NGRLIGHITD---GIGFVRN-LK 118
Query: 351 ERQGINGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGAR-VIIFNRN---YERA--- 403
E G+N + GK V++GAGGA A+ GA+ V IFNR Y RA
Sbjct: 119 E-HGVN--------VKGKKLVVLGAGGAATAIEVQTALDGAKQVAIFNRQDAFYTRAETT 169
Query: 404 -KALADAVSGEALHFEYLHEFFPEKGMI-----LANASAIGMEPNSDQSPVPKEALKAYE 457
K LA A + ++L + K I L NA+ +GM+PN+ S V L++
Sbjct: 170 AKKLAQAAPDVTVTVDHLEDDAKLKAAIAQADILVNATTVGMKPNAGTSLVDPAYLRSDL 229
Query: 458 LVFDAVYTPRNTRLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAP 506
+V D VY+P T+L+ +A + GA G M + Q ++L+TG P
Sbjct: 230 VVADTVYSPLKTKLIEDAEKCGAKTAPGKGMLLWQGAAGYKLWTGQDMP 278
>gi|188587948|ref|YP_001920063.1| shikimate 5-dehydrogenase [Clostridium botulinum E3 str. Alaska
E43]
gi|188498229|gb|ACD51365.1| shikimate 5-dehydrogenase [Clostridium botulinum E3 str. Alaska
E43]
Length = 289
Score = 122 bits (305), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 94/299 (31%), Positives = 151/299 (50%), Gaps = 30/299 (10%)
Query: 231 EHINPDTKIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLV--DDVKEFFRTYSGTD 288
E I T++ GL++ P+ HS P +HN AF + Y+ V + +++ + +
Sbjct: 3 ERITGHTELIGLIATPIRHSSSPTMHNEAFAKLGLDYAYLAFEVGTEQLEDTIKGFRAMS 62
Query: 289 FAGFSVGIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDA 348
G +V +P+K D++ P A+ GAVNT++ DG L G+ TD + A++DA
Sbjct: 63 VRGCNVSMPNKTVVHKYLDKLSPAAELCGAVNTVVND--DGVLTGHITDGIGYMRALKDA 120
Query: 349 LRERQGINGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRG-ARVIIFNRNYE---RA- 403
GIN PI GK +VGAGGA A+ A G A + IFNR E RA
Sbjct: 121 -----GIN-------PI-GKKMTIVGAGGAATAIEIQAALDGVAEISIFNRKDEFFARAE 167
Query: 404 ---KALADAVSGEALHFEY--LHEFFPE--KGMILANASAIGMEPNSDQSPVPKEA-LKA 455
K + + + +A ++ L + E + NA+ +GM+P ++ +P + L++
Sbjct: 168 KTVKDINEKTNCKATLYDLSDLDKLKEEIVDSYLFTNATGMGMKPLEGKTYIPDSSFLRS 227
Query: 456 YELVFDAVYTPRNTRLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRKLV 514
+V D VY PR T LLR A EVG V+G+ M + Q F ++TG P ++M+ ++
Sbjct: 228 DLIVSDVVYAPRETELLRMAREVGCKTVNGLGMMLFQGAVAFEMWTGKEMPIEYMKDIL 286
>gi|330839701|ref|YP_004414281.1| Shikimate dehydrogenase [Selenomonas sputigena ATCC 35185]
gi|329747465|gb|AEC00822.1| Shikimate dehydrogenase [Selenomonas sputigena ATCC 35185]
Length = 296
Score = 122 bits (305), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 92/275 (33%), Positives = 141/275 (51%), Gaps = 24/275 (8%)
Query: 237 TKIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYV--PMLVDDVKEFFRTYSGTDFAGFSV 294
TK ++ +P+GHS P + N A R + YV P+L + +++ R F GF+V
Sbjct: 6 TKNLAVIGSPIGHSLSPAMQNAAIRAVGLDYAYVALPVLPERLEDGVRGLRALGFRGFNV 65
Query: 295 GIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALRERQG 354
IPHK + DEV A++IGAVNT++ G+L G+NTD E + A+
Sbjct: 66 TIPHKSAILPLLDEVDEAARAIGAVNTVVCEA--GRLKGFNTDVEGFLGAL--------- 114
Query: 355 INGVASHTSPIAGKIFVLVGAGGAGRALAFGA-KSRGARVIIFNRNYERAKALAD--AVS 411
A+ + GK VL+GAGGA RA +G +S A V + RN +A++LA+ A
Sbjct: 115 ----AARGFSVEGKRVVLLGAGGAARAALYGLLRSGAAEVTLGVRNAPKARSLAEEFAQY 170
Query: 412 GEALHFEYLHEFFPE---KGMILANASAIGMEPNSD-QSPVPKEALKAYELVFDAVYTPR 467
GE ++ F E K ++ N + +GM P + PVP +A+ +D +YTP
Sbjct: 171 GEVCALDWNEAAFEEAVRKAALVVNTTPLGMAPQTQAMPPVPWQAVHERTFFYDIIYTPA 230
Query: 468 NTRLLREAAEVGATVVSGVEMFIRQALGQFRLFTG 502
T+ L+ A +G ++G M + Q FRL+TG
Sbjct: 231 KTQFLQRAESLGCPTLNGEAMLVGQGAAAFRLWTG 265
>gi|448394123|ref|ZP_21567988.1| shikimate 5-dehydrogenase [Haloterrigena salina JCM 13891]
gi|445662713|gb|ELZ15477.1| shikimate 5-dehydrogenase [Haloterrigena salina JCM 13891]
Length = 266
Score = 122 bits (305), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 98/278 (35%), Positives = 137/278 (49%), Gaps = 22/278 (7%)
Query: 238 KIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLVD--DVKEFFRTYSGTDFAGFSVG 295
++G++ NPV HS P +H AFR + YV D +KE FR G +V
Sbjct: 2 DVYGIIGNPVEHSLSPPMHEAAFRERGIDATYVTFEADPDRIKEAFRGAEALGVDGLTVT 61
Query: 296 IPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALRERQGI 355
+P K A + + + +GAVNTI + VGYNTD + A E
Sbjct: 62 LPFKHDAFEFAEPDEQI-RRVGAVNTIDF--TESGPVGYNTDMTGTLRAFE--------- 109
Query: 356 NGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGARVIIFNRNYERAKALADAVSGEAL 415
H + G V+VGAGGA RALAFG + GA V I NR +A+ LAD V G
Sbjct: 110 ----HHDVALEGTRAVVVGAGGAARALAFGFEEAGADVQIANRTASKARDLADEVPGATG 165
Query: 416 H-FEYLHEFFPEKGMILANASAIGMEPNSDQSPVPKEALKAYELVFDAVYTPRNTRLLRE 474
H E L + + ++ANA+++G+E SD+S P +A + FDAVY P TR L++
Sbjct: 166 HGLEALPDLMADAD-VVANATSVGLE--SDESVAPADAWHGDLVAFDAVYKPLETRFLKD 222
Query: 475 AAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRK 512
AA A + G M + Q + F +TG AP + M +
Sbjct: 223 AAAADARTIDGAWMLLFQGVDAFETWTGEDAPVETMNE 260
>gi|418977324|ref|ZP_13525148.1| shikimate dehydrogenase [Streptococcus mitis SK575]
gi|383350027|gb|EID27931.1| shikimate dehydrogenase [Streptococcus mitis SK575]
Length = 284
Score = 122 bits (305), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 90/296 (30%), Positives = 149/296 (50%), Gaps = 33/296 (11%)
Query: 237 TKIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLVD--DVKEFFRTYSGTDFAGFSV 294
T++ +V+NP+ HS P +HN AF T NG+YV ++ D+ E G ++
Sbjct: 7 TRLAAVVANPIKHSISPFIHNSAFEATATNGVYVAWEIEAGDLAETVANIRRYQMFGINL 66
Query: 295 GIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALRERQG 354
+P+KE + DE+ A+ IGAVNT++ +G L+GYNTD + ++
Sbjct: 67 SMPYKEQVIPYLDELSDEARLIGAVNTVVNE--NGNLIGYNTDGKGFFKSL--------- 115
Query: 355 INGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRG-ARVIIFNR--NYERAKALADAV- 410
S T I GK L+GAGGA +++ A G +++ +F R + E+ + D +
Sbjct: 116 ----PSFT--ITGKKMTLLGAGGAAKSILAQAILDGVSQISVFVRSVSMEKTRPYLDKLQ 169
Query: 411 --SGEALHFEYLHEFFPEKGMI-----LANASAIGMEPNSDQSPVPKE-ALKAYELVFDA 462
+G + L + F + I L NA+++GM+ S SPVP+ L LV D
Sbjct: 170 EQTGFKVDLYALEDVFELQARIAESDLLVNATSVGMDGKS--SPVPESIVLSETLLVADI 227
Query: 463 VYTPRNTRLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRKLVLEQF 518
+Y P T L+ A G + V+G+ M + QA F+L+TG P + + + + E++
Sbjct: 228 IYQPFETPFLKWARSQGNSAVNGLGMLLYQAAEAFQLWTGKEMPTEEIWQSLTEKY 283
>gi|291296199|ref|YP_003507597.1| shikimate 5-dehydrogenase [Meiothermus ruber DSM 1279]
gi|290471158|gb|ADD28577.1| shikimate 5-dehydrogenase [Meiothermus ruber DSM 1279]
Length = 271
Score = 122 bits (305), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 99/269 (36%), Positives = 140/269 (52%), Gaps = 28/269 (10%)
Query: 240 FGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPM------LVDDVKEFFRTYSGTDFAGFS 293
GL+ PVGHS P +H A R G Y + L ++E R F G +
Sbjct: 3 LGLIGFPVGHSLSPAMHQAALRAAGLEGSYRALETPPSFLRARLQEVRRA-----FTGVN 57
Query: 294 VGIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALRERQ 353
V IPHKE +A DE+ P A +IGAVNTI+ G+L+GYNTD I+ +++A
Sbjct: 58 VTIPHKESVLAYLDELSPEAAAIGAVNTIVCE--QGRLIGYNTDAMGFIAGLDEA----- 110
Query: 354 GINGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGARVIIFNRNYERAKALADAVSGE 413
G+A K +L+GAGGA RA+A+ K GA V ++NR ERA+AL A+ G
Sbjct: 111 ---GIAYRN-----KKALLLGAGGAARAVAYALKEEGAHVAVYNRTTERARALCAAM-GL 161
Query: 414 ALHFEYLHEFFPEKGMILANASAIGMEPNSDQSPVPKEALKAYELVFDAVYTPRNTRLLR 473
L E L E +L N +++G+ + +SP+P L +V D +Y P+ TRLL
Sbjct: 162 HLVTEPLLEAAVRSCDLLVNTTSVGLN-DPTRSPLPPGLLPRAGVVVDIIYHPQTTRLLL 220
Query: 474 EAAEVGATVVSGVEMFIRQALGQFRLFTG 502
EA + G + G+ M + Q F L+TG
Sbjct: 221 EAQQAGLVTLGGLPMLVWQGALAFELWTG 249
>gi|358057337|dbj|GAA96686.1| hypothetical protein E5Q_03357 [Mixia osmundae IAM 14324]
Length = 1608
Score = 121 bits (304), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 127/514 (24%), Positives = 217/514 (42%), Gaps = 57/514 (11%)
Query: 34 GADLVELCIDSMEFSHIS-------------EVDKLIQHPTLPAIVSYRLKSSRKSSDEA 80
G D +EL +D + S ++ +L +H +LP I + R S +
Sbjct: 1121 GVDAIELRVDLLTGSQAPSKPFVPSTKYVSLQLAQLRRHTSLPIIFTVRTVSQGGFFPDD 1180
Query: 81 CKNTCLQVLRRALDLDVEFVEMDYEVASDPLMSEIIYSRSNTKIIVSSYLNGGGKPTTEK 140
+ +L A+ E+V+++ + + L S+ + ++ ++ I+ S + G
Sbjct: 1181 AQEAYFDLLTLAVRQACEYVDLEMQWPTGAL-SKFVRAKQSSLILASFHDWSGVHKWKST 1239
Query: 141 LGDVIACMQATGADVMKLEIAVDSITDLAPV--FEMLTHCQVPLIALAVGSRGLISQLLG 198
D + DV+K+ + S+TD + + F PL+ + +G+ G +S++L
Sbjct: 1240 AIDAAYARASLYGDVVKIVLKAQSMTDNSEMLSFRAAHASGKPLLTVNMGTVGQLSRILN 1299
Query: 199 PKFGGFLVYGSLGGKSVPGLPTLVSLKQVYQLEHINPDTKIFGLVSNPVGHSKGPILHNP 258
P + + +L + PG + ++Q L K F L+ P+ SK P+LHN
Sbjct: 1300 PVLSP-VTHPALPAAAAPGQLAVYQIQQALSLIG-QISVKRFALLGQPISASKSPLLHNT 1357
Query: 259 AFRHTRFNGIYVPMLVDDVKEFFRTY-SGTDFAGFSVGIPHKEPAVACCDEVHPLAKSIG 317
F Y + +V E R + +DF G SV IPHK +A CDEV + IG
Sbjct: 1358 GFAALGLPHTYGLLETAEVDESVRDFVRSSDFGGASVTIPHKTAIIALCDEVSEAVRIIG 1417
Query: 318 AVNTI--IRRPIDGKLVGYNTDCESAISAIEDALRERQGINGVASHTSPIAGKIFVLVGA 375
A NT+ ++R L G NTD +S I A + A +++GA
Sbjct: 1418 ACNTLVPVQRGSQIILRGENTDFRGIVSII------------AAEQLAITADSHALVIGA 1465
Query: 376 GGAGRALAFGAKSRG-ARVIIFNRNYERAKALADAVSGEALHFEYLHEFFPEKGMILANA 434
GG RA + G AR++++NR A+ +A +++ P + + ++
Sbjct: 1466 GGTARAAVYALHQAGFARILLYNRTIANAQVVARSLA-------------PAIKVDIIDS 1512
Query: 435 SAIGMEPNSDQSPVPKEALKAYE---------LVFDAVYTPRNTRLLREAAEV-GATVVS 484
+P + S VP + + D YTPR T LL+ A V
Sbjct: 1513 LQSAGQPQAIVSTVPGSSSIEISSSLFRPGGGIAIDMAYTPRETALLKAAQTFPDWRAVP 1572
Query: 485 GVEMFIRQALGQFRLFTGGLAPEDFMRKLVLEQF 518
G+E+ + Q QFRL+TG AP + VL +
Sbjct: 1573 GIEVLLAQGYEQFRLWTGFTAPACLIAPTVLSAY 1606
>gi|418963256|ref|ZP_13515095.1| shikimate dehydrogenase [Streptococcus anginosus subsp. whileyi
CCUG 39159]
gi|383343371|gb|EID21555.1| shikimate dehydrogenase [Streptococcus anginosus subsp. whileyi
CCUG 39159]
Length = 284
Score = 121 bits (304), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 89/288 (30%), Positives = 140/288 (48%), Gaps = 33/288 (11%)
Query: 233 INPDTKIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLV--DDVKEFFRTYSGTDFA 290
I+ T++ +V+NP+ HS P +HN AF T NG+YV + DD+K +
Sbjct: 3 IDGYTRLAAVVANPIKHSISPFIHNAAFEQTGVNGVYVAWEISQDDLKATVENIRCYNMF 62
Query: 291 GFSVGIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALR 350
G ++ +P+K+ + DEV P A+ IGAVNT++ + GKL+GYNTD + ++ +
Sbjct: 63 GINLSMPYKQVVIPFLDEVTPAAQMIGAVNTVVNQ--HGKLIGYNTDGKGFFMSLPSFV- 119
Query: 351 ERQGINGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGA-RVIIFNR--NYER-AKAL 406
I GK V++GAGGA A+ A G + +F R ++ER ++ +
Sbjct: 120 --------------IKGKKMVMLGAGGAATAIIVQAALDGTEEIFVFTRQSSFERVSQKM 165
Query: 407 ADAVSGEALHFEYL----HEFFPEK---GMILANASAIGMEPNSDQSPVPKEA-LKAYEL 458
+ A L E EK +L N +++GM+ + P+P L L
Sbjct: 166 KEIQQKTATKIWVLPLENQELLQEKINVSALLVNGTSLGMDGKA--LPIPSSIRLPHSLL 223
Query: 459 VFDAVYTPRNTRLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAP 506
V D +Y P T L+ A VV+G+ M + QA F+L+TG P
Sbjct: 224 VADVIYQPFETPFLKWAKGQEVEVVNGLGMLLYQAAEAFKLWTGKKMP 271
>gi|256851823|ref|ZP_05557211.1| shikimate 5-dehydrogenase [Lactobacillus jensenii 27-2-CHN]
gi|260661916|ref|ZP_05862826.1| shikimate 5-dehydrogenase [Lactobacillus jensenii 115-3-CHN]
gi|297205445|ref|ZP_06922841.1| shikimate 5-dehydrogenase [Lactobacillus jensenii JV-V16]
gi|256615781|gb|EEU20970.1| shikimate 5-dehydrogenase [Lactobacillus jensenii 27-2-CHN]
gi|260547385|gb|EEX23365.1| shikimate 5-dehydrogenase [Lactobacillus jensenii 115-3-CHN]
gi|297150023|gb|EFH30320.1| shikimate 5-dehydrogenase [Lactobacillus jensenii JV-V16]
Length = 307
Score = 121 bits (304), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 93/300 (31%), Positives = 148/300 (49%), Gaps = 37/300 (12%)
Query: 237 TKIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLVDDVK-----EFFRTYSGTDFAG 291
T + GL++ P+ HS P +HN AF N Y+ +D+ K E RT D G
Sbjct: 20 TYLIGLMAYPIRHSMSPTMHNNAFAKLGLNFTYLCFEIDNKKLPKAVEAIRTL---DMRG 76
Query: 292 FSVGIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALRE 351
+V +P+K+ + D++ P ++ AVNTI+ +G L GY TD + ++ED
Sbjct: 77 SNVSMPNKKEVIKYLDKLSPASEMCDAVNTIVND--NGVLTGYTTDGIGFMKSLED---- 130
Query: 352 RQGINGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGARVI-IFNRNYER-------A 403
+GI+ I GK L GAGGA +A A G I IFN N ++
Sbjct: 131 -EGID--------IRGKKMCLAGAGGAATPIAVQAALDGVSEIEIFNLNDDKWSQAEKNV 181
Query: 404 KALADAVSGEAL--HFEYLHEFFP--EKGMILANASAIGMEPNSDQSPVPKEALKAYEL- 458
K + + + +A H E +F + I +A+ +GM+P D + V + ++
Sbjct: 182 KTINEKTNCKASLHHLEDKDDFKRAISECDIYCDATGVGMKPLEDMTLVEDPSWFHEDMT 241
Query: 459 VFDAVYTPRNTRLLREAAEVGAT-VVSGVEMFIRQALGQFRLFTGGLAPEDFMRKLVLEQ 517
VFD VY PR T+L++ A + G V++G+ M I Q F+L+TG P D++R+++ E
Sbjct: 242 VFDTVYAPRTTKLMKVAQKAGVKHVLNGIGMMIEQGAAAFKLWTGEDMPTDYIRQVIFEN 301
>gi|448363698|ref|ZP_21552295.1| shikimate 5-dehydrogenase [Natrialba asiatica DSM 12278]
gi|445645801|gb|ELY98798.1| shikimate 5-dehydrogenase [Natrialba asiatica DSM 12278]
Length = 271
Score = 121 bits (304), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 108/280 (38%), Positives = 136/280 (48%), Gaps = 23/280 (8%)
Query: 238 KIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLVD--DVKEFFRTYSGTDFAGFSVG 295
+FGL+ NPVGHS P +H A+ F+ YV + D+ + G +V
Sbjct: 2 DVFGLLGNPVGHSLSPPMHEAAYDELGFDARYVTFEPEPGDLAAAIDGAAALGITGLNVT 61
Query: 296 IPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKL-VGYNTDCESAISAIEDALRERQG 354
IP K+ A+ E LA IGAVNTI + GYNTD A+ A LRE
Sbjct: 62 IPFKQDALEFV-EPDDLAARIGAVNTIDFADASAEQPTGYNTDAAGALRA----LRE--- 113
Query: 355 INGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGARVIIFNRNYERAKALADAVSGEA 414
H I V+VGAGGAGRA++F GA V I NR A LA V G
Sbjct: 114 ------HEVTIENAAVVVVGAGGAGRAISFALSDAGADVAIANRTESTAHDLAADVPGAT 167
Query: 415 LHF---EYLHEFFPEKGMILANASAIGMEPNSDQSPVPKEALKAYELVFDAVYTPRNTRL 471
H + L + +L NA+++GME D +PVP AL +V DAVY P TRL
Sbjct: 168 GHDLADDTLDSLLAQAD-VLVNATSVGME--DDATPVPAGALHGELVVMDAVYRPLETRL 224
Query: 472 LREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMR 511
LR+AA VGA V G M + Q + F L+TG AP D M
Sbjct: 225 LRDAAAVGARTVDGAWMLLYQGVEAFELWTGRDAPVDEMN 264
>gi|423084552|ref|ZP_17073052.1| shikimate dehydrogenase [Clostridium difficile 050-P50-2011]
gi|357552122|gb|EHJ33897.1| shikimate dehydrogenase [Clostridium difficile 050-P50-2011]
Length = 287
Score = 121 bits (304), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 89/301 (29%), Positives = 146/301 (48%), Gaps = 31/301 (10%)
Query: 232 HINPDTKIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVP--MLVDDVKEFFRTYSGTDF 289
I+ T +F L+ PVGHSK P+++N +F+ + Y+ + VD VKE +
Sbjct: 2 EISGRTGLFALIGTPVGHSKSPVMYNYSFKKLDLDYRYLAFDITVDKVKEALLAIKTFNI 61
Query: 290 AGFSVGIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDAL 349
G +V +P K DE+ P A+ IGA NTI+ +GKLVG+ TD + +++
Sbjct: 62 KGANVTMPCKSAVTEYMDELSPAARIIGACNTIVND--NGKLVGHITDGVGYVRNLKE-- 117
Query: 350 RERQGINGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGARVI-IFNRN---YERAKA 405
NGV + GK ++GAGGA A+ GAR I IFN Y+RA+
Sbjct: 118 ------NGV-----EVKGKKITIMGAGGAATAIQVQCALDGAREISIFNTKDDFYKRAEQ 166
Query: 406 LADAVSGEA-------LHFEYLHEFFPE--KGMILANASAIGMEPNSDQSPVPKEALKAY 456
+ + + E ++ + E IL NA+ IGM+P +++ + ++
Sbjct: 167 TVENIKKDVPECVVNLYDLEDTNKLYEEIESSDILTNATLIGMKPYDNETNIKDTSVLRK 226
Query: 457 ELVF-DAVYTPRNTRLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRKLVL 515
+LV D VY P+ T+++ +A G + G+ M + Q F L+TG P + + +L
Sbjct: 227 DLVVTDVVYNPKKTKMIEDAEANGCKAIGGLGMLLYQGAEAFNLYTGLEMPVEEVNELCF 286
Query: 516 E 516
+
Sbjct: 287 K 287
>gi|448733116|ref|ZP_21715362.1| shikimate 5-dehydrogenase [Halococcus salifodinae DSM 8989]
gi|445803449|gb|EMA53746.1| shikimate 5-dehydrogenase [Halococcus salifodinae DSM 8989]
Length = 270
Score = 121 bits (304), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 101/282 (35%), Positives = 133/282 (47%), Gaps = 26/282 (9%)
Query: 238 KIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPM--LVDDVKEFFRTYSGTDFAGFSVG 295
++FGLV NPV HS P +H A+ + YV DD++ G +V
Sbjct: 2 QVFGLVGNPVSHSLSPPMHEAAYDECGIDARYVTFEPAPDDLEAAIEGARALGIEGLNVT 61
Query: 296 IPHKEPAVACCDEVHP--LAKSIGAVNTIIRRPIDGKL---VGYNTDCESAISAIEDALR 350
IP K+ A+ D V P LA IGAVNTI D + G+NTD E A +
Sbjct: 62 IPFKQDAL---DHVDPDDLATRIGAVNTIDFGGPDDRASMPTGHNTDAEGVGRAFD---- 114
Query: 351 ERQGINGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGARVIIFNRNYERAKALADAV 410
+GVA + + RA AF G V I NR ERA ALA V
Sbjct: 115 ----YHGVALNGRAVVVGAGGAG------RAAAFALADAGMSVAIANRTVERADALAAEV 164
Query: 411 SGEALHFEYLHEFFPEKGMILANASAIGMEPNSDQSPVPKEALKAYELVFDAVYTPRNTR 470
G + H E ++ NA+++GME N ++P+P EAL A V DAVY+P TR
Sbjct: 165 DGASGHGLAPLERLVADADVVVNATSVGMEAN--ETPIPAEALHADLAVLDAVYSPIETR 222
Query: 471 LLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRK 512
LLR+AA VGAT + G M + Q + F + G AP D M +
Sbjct: 223 LLRDAATVGATTIDGGWMLLYQGVAAFERWIGQDAPIDVMNE 264
>gi|345515156|ref|ZP_08794662.1| shikimate 5-dehydrogenase [Bacteroides dorei 5_1_36/D4]
gi|229434416|gb|EEO44493.1| shikimate 5-dehydrogenase [Bacteroides dorei 5_1_36/D4]
Length = 246
Score = 121 bits (304), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 80/268 (29%), Positives = 129/268 (48%), Gaps = 28/268 (10%)
Query: 238 KIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLVDDVKEFFRTY-SGTDFAGFSVGI 296
K +GL+ P+GHS N F + YV + +KE + D GF+V I
Sbjct: 2 KKYGLIGYPLGHSFSKNFFNEKFHSENIDAEYVNFEIPSIKELPSVLLANPDLVGFNVTI 61
Query: 297 PHKEPAVACCDEVHPLAKSIGAVNTI--IRRPIDGKLVGYNTDCESAISAIEDALRERQG 354
P+KE ++ DE+ A +IGAVN I +R+ KL+GYN+D +I D L E Q
Sbjct: 62 PYKEQVISYLDELDKDAAAIGAVNVIKIVRQKGKTKLIGYNSDVIGFTQSI-DPLLEPQH 120
Query: 355 INGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGARVIIFNRNYERAKALADAVSGEA 414
K +++G GGA +A+A+G K G +RN D ++ E
Sbjct: 121 -------------KKALILGTGGASKAIAYGLKKLGLECKFVSRNLREEMLTYDQLTPEI 167
Query: 415 LHFEYLHEFFPEKGMILANASAIGMEPNSDQSP-VPKEALKAYELVFDAVYTPRNTRLLR 473
+ EY ++ N + +GM P +D+ P +P + L L++D +Y P T ++
Sbjct: 168 MD-EY---------KVIVNCTPVGMYPRADEYPNIPYQYLTPNHLLYDLLYNPDTTLFMK 217
Query: 474 EAAEVGATVVSGVEMFIRQALGQFRLFT 501
+ A+ GA +G+EM + QA G + ++
Sbjct: 218 KGADKGAITKNGLEMLLLQAFGAWDIWN 245
>gi|448301909|ref|ZP_21491898.1| shikimate 5-dehydrogenase [Natronorubrum tibetense GA33]
gi|445583117|gb|ELY37451.1| shikimate 5-dehydrogenase [Natronorubrum tibetense GA33]
Length = 268
Score = 121 bits (304), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 107/281 (38%), Positives = 136/281 (48%), Gaps = 26/281 (9%)
Query: 238 KIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLVD--DVKEFFRTYSGTDFAGFSVG 295
+FGL+ NPVGHS P +H A+ YV D D+ G +V
Sbjct: 2 DVFGLLGNPVGHSLSPPMHEAAYDELGLEARYVTFEPDPADIAAAIDGAEALGITGLNVT 61
Query: 296 IPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKL-VGYNTDCESAISAIEDALRERQG 354
IP K+ + C E LA IGAVNTI G+ G+NTD A+ A+ D
Sbjct: 62 IPFKQDVLECV-EADELATRIGAVNTI---DFTGETPTGHNTDAIGALRALRD------- 110
Query: 355 INGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGARVIIFNRNYERAKALADAV---S 411
H + V+VGAGGAGRA+AFG GA V I NR A LA V +
Sbjct: 111 ------HDVTVEDARAVVVGAGGAGRAVAFGLADAGATVAIANRTESTAHDLAAEVPNAT 164
Query: 412 GEALHFEYLHEFFPEKGMILANASAIGMEPNSDQSPVPKEALKAYELVFDAVYTPRNTRL 471
G L + L + + +L NA+++GME D +PVP EAL V DAVY P TRL
Sbjct: 165 GHGLETDELTDLLADAD-VLVNATSVGME--EDATPVPAEALHGELAVLDAVYRPLETRL 221
Query: 472 LREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRK 512
LR+AA VGAT V G M + Q + +TG AP D M +
Sbjct: 222 LRDAAGVGATTVDGAWMLLYQGVEALERWTGRDAPVDAMNE 262
>gi|325262925|ref|ZP_08129661.1| shikimate dehydrogenase [Clostridium sp. D5]
gi|324032019|gb|EGB93298.1| shikimate dehydrogenase [Clostridium sp. D5]
Length = 276
Score = 121 bits (304), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 83/273 (30%), Positives = 127/273 (46%), Gaps = 40/273 (14%)
Query: 240 FGLVSNPVGHSKGPILHNPAFRHTRFNGIY--VPMLVDDVKEFFRTYSGTDFAGFSVGIP 297
FG++ N +GHS P +H R G Y + ++ + G +V +P
Sbjct: 11 FGVLGNQLGHSLSPEIHEDLLRQQNICGTYKKYELNENEAPHILEVMKAENIRGMNVTMP 70
Query: 298 HKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALRERQGING 357
+KE D + P A+ IGAVNTI+ + DGK GYNTD A+S + + G++
Sbjct: 71 YKEVIYQLMDVLDPHAEKIGAVNTILMK--DGKFYGYNTDYIGAVS-----MFHKDGVS- 122
Query: 358 VASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGARVIIFNRNYERAKALADAVSGEALHF 417
+AG+ V++G+GGA + L +G GA I E+A
Sbjct: 123 -------LAGREIVILGSGGAAKGLIYGFHMDGAAKITVAARNEKA-------------I 162
Query: 418 EYLHEFFP----------EKGMILANASAIGMEPNSDQSPVPKEALKAYELVFDAVYTPR 467
EYL E FP G IL N + +GM P+ +SPV ++ +++ D VY P
Sbjct: 163 EYLEERFPYIHTCSLTDIPAGDILVNTTPLGMYPHIGESPVDVSVIRQFKVASDIVYNPL 222
Query: 468 NTRLLREAAEVGATVVSGVEMFIRQALGQFRLF 500
T LR A E G +V+G+ M + QA+G ++
Sbjct: 223 ITEFLRIAKEEGLQIVTGLMMLVDQAIGSEEIW 255
>gi|255656694|ref|ZP_05402103.1| shikimate 5-dehydrogenase [Clostridium difficile QCD-23m63]
gi|296451777|ref|ZP_06893503.1| shikimate dehydrogenase [Clostridium difficile NAP08]
gi|296880095|ref|ZP_06904063.1| shikimate dehydrogenase [Clostridium difficile NAP07]
gi|296259387|gb|EFH06256.1| shikimate dehydrogenase [Clostridium difficile NAP08]
gi|296428909|gb|EFH14788.1| shikimate dehydrogenase [Clostridium difficile NAP07]
Length = 287
Score = 121 bits (304), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 87/287 (30%), Positives = 137/287 (47%), Gaps = 31/287 (10%)
Query: 232 HINPDTKIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVP--MLVDDVKEFFRTYSGTDF 289
I+ T +F L+ PVGHSK P+++N +F + Y+ + VD VKE +
Sbjct: 2 EISGRTGLFALIGTPVGHSKSPVMYNYSFEKLDLDYRYLAFDITVDKVKEALSAIKTFNI 61
Query: 290 AGFSVGIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDAL 349
G +V +P K DE+ P A+ IGA NTI+ +GKLVG+ TD + +++
Sbjct: 62 KGANVTMPCKSAVTEYMDELSPAARIIGACNTIVND--NGKLVGHITDGVGYVRNLKENE 119
Query: 350 RERQGINGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGARVI-IFNRN---YERAKA 405
E + GK ++GAGGA A+ GAR I IFN Y+RA+
Sbjct: 120 VE-------------VKGKKVTIMGAGGAATAIQVQCALDGAREISIFNAKDDFYKRAEQ 166
Query: 406 LADAVSGEA-------LHFEYLHEFFPE--KGMILANASAIGMEPNSDQSPVPKEALKAY 456
+ + E E ++ + E IL NA+ IGM+P +++ + ++
Sbjct: 167 TVENIKKEVPKCIVNLYDLEDTNKLYEEIESSDILTNATLIGMKPYDNETNIKDTSVLRK 226
Query: 457 ELVF-DAVYTPRNTRLLREAAEVGATVVSGVEMFIRQALGQFRLFTG 502
+LV D VY PR T+++ +A G + G+ M + Q F L+TG
Sbjct: 227 DLVVTDVVYNPRKTKMIEDAESNGCKAIGGLGMLLYQGAESFNLYTG 273
>gi|254461040|ref|ZP_05074456.1| shikimate 5-dehydrogenase [Rhodobacterales bacterium HTCC2083]
gi|206677629|gb|EDZ42116.1| shikimate 5-dehydrogenase [Rhodobacteraceae bacterium HTCC2083]
Length = 277
Score = 121 bits (304), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 97/281 (34%), Positives = 134/281 (47%), Gaps = 18/281 (6%)
Query: 241 GLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLV--DDVKEFFRTYSGTDFAGFSVGIPH 298
G++ +P+ HSK P LH + G Y+PM + D++ R F G +V IPH
Sbjct: 10 GVIGHPIAHSKSPQLHGHWLKKNGIKGHYIPMDIAPKDLESAIRLLPKMGFVGVNVTIPH 69
Query: 299 KEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALRERQGINGV 358
KE + D V AK IGA NT+I R DGK+ NTD + Q +
Sbjct: 70 KEAVLKIADLVTDRAKQIGAANTLIFRK-DGKIHADNTDGYGFM----------QNLLQS 118
Query: 359 ASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGA-RVIIFNRNYERAKALADAVSGEALHF 417
A P AG VL GAGGA RA+ G +++ NR ERA+ L +
Sbjct: 119 APKWDPRAGPAMVL-GAGGAARAVLASFIDIGVPEILLSNRTRERAETLKADFGDKITVV 177
Query: 418 EYLHEFFPEKGM-ILANASAIGMEPNSDQSPVPKEALKAYELVFDAVYTPRNTRLLREAA 476
+++ +G + N +++GM + VP +AL LV D VYTP T+LLR A
Sbjct: 178 DWVQAGNAIEGANAVINTTSLGMIGKPEMR-VPLDALAPGMLVSDLVYTPLQTKLLRAAT 236
Query: 477 EVGATVVSGVEMFIRQALGQF-RLFTGGLAPEDFMRKLVLE 516
EVGAT V G+ M + QA F R F +D +R +VL
Sbjct: 237 EVGATAVDGLGMLLHQATPGFERWFKVKPEVDDELRAVVLR 277
>gi|166366519|ref|YP_001658792.1| shikimate 5-dehydrogenase [Microcystis aeruginosa NIES-843]
gi|189046316|sp|B0JPM6.1|AROE_MICAN RecName: Full=Shikimate dehydrogenase
gi|166088892|dbj|BAG03600.1| shikimate 5-dehydrogenase [Microcystis aeruginosa NIES-843]
Length = 286
Score = 121 bits (304), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 82/298 (27%), Positives = 145/298 (48%), Gaps = 27/298 (9%)
Query: 233 INPDTKIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLV--DDVKEFFRTYSGTDFA 290
IN TK+ G++ +P+GH+ P +HN A N +Y+P+ + ++++ S D
Sbjct: 4 INGKTKLLGVIGDPIGHTLSPPMHNAAIDALGLNYVYLPLPIAPENLETAIAGLSAIDLE 63
Query: 291 GFSVGIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALR 350
GFSV IPHK + ++ A+ +GAVNT+ R + G NTD + ++ ++ +
Sbjct: 64 GFSVTIPHKLAIIPLLSQITEKARLVGAVNTVWRTETGWQ--GTNTDVDGFLAPLKSLDK 121
Query: 351 ERQGINGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRG-ARVIIFNRNYERAKALADA 409
+ +N V ++G GGA RA+ G + + RN ++ ++
Sbjct: 122 DWSQVNPV-------------ILGNGGAARAVVVACAQLGCGEIHVVGRNQKKLDPFKES 168
Query: 410 VSGEALH-FEYLHEFFPEKGMI-----LANASAIGMEPNSDQSPVPKEALKAYE---LVF 460
+ +L+ +H + +G++ L N++ IGM P +QSPV E L + +
Sbjct: 169 WANTSLYDLLEVHSWDELEGLVSTTELLINSTPIGMSPQGEQSPVELELLDLLPPSAIAY 228
Query: 461 DAVYTPRNTRLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRKLVLEQF 518
D +Y PR T+ LR A G ++ G+EM + Q ++ G P MR+ +L+QF
Sbjct: 229 DLIYNPRPTKFLRLARTRGIRIIDGLEMLVNQGAIALEIWLGQPVPVSVMREALLKQF 286
>gi|120603886|ref|YP_968286.1| shikimate 5-dehydrogenase [Desulfovibrio vulgaris DP4]
gi|120564115|gb|ABM29859.1| shikimate dehydrogenase [Desulfovibrio vulgaris DP4]
Length = 301
Score = 121 bits (304), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 90/286 (31%), Positives = 139/286 (48%), Gaps = 26/286 (9%)
Query: 238 KIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYV--PMLVDDVKEFFRTYSGTDFAGFSVG 295
+++G+V +P+GH+ P+LHN F +Y+ P+ F G SV
Sbjct: 35 RLYGIVGHPLGHTLSPLLHNWGFALHSLPAVYMAWPVPPGRFASFMEAVRTLPVHGASVT 94
Query: 296 IPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLV-GYNTDCESAISAIEDALRERQG 354
IPHKE A+ CD V A+++GAVNT+ ++G +V G NTD ++ LR R
Sbjct: 95 IPHKEEALRLCDRVTDRARAVGAVNTLF---LEGGVVCGENTD----VTGFLAPLRAR-- 145
Query: 355 INGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGAR-VIIFNRNYERAKALADAVSGE 413
GV + +++GAGGA RA+ G G R V I NR +++A LA A +
Sbjct: 146 --GVRIDEA-------LVLGAGGAARAVLAGLVELGVRRVRISNRTHDKAMELAGAFGAD 196
Query: 414 ALHFEYLHEFFPEKGMILANASAIGME-PNSDQSPVPKEALKAYELVFDAVYTPRNTRLL 472
+ ++ E ++ N + GM+ +SP+P A + +D VY P TR L
Sbjct: 197 VVPWD---ERGSAAAGLVVNTTPCGMQGARMGESPLPDGAFTGRGMAYDLVYNPLTTRFL 253
Query: 473 REAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRKLVLEQF 518
+A G G+ MF+ Q QFR++TG P + R+L+ E
Sbjct: 254 ADARAAGWETQDGLGMFVEQGREQFRIWTGLDLPAEGARRLIAEAL 299
>gi|417924193|ref|ZP_12567645.1| shikimate dehydrogenase [Streptococcus mitis SK569]
gi|342836247|gb|EGU70463.1| shikimate dehydrogenase [Streptococcus mitis SK569]
Length = 284
Score = 121 bits (303), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 93/297 (31%), Positives = 150/297 (50%), Gaps = 35/297 (11%)
Query: 237 TKIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLVD--DVKEFFRTYSGTDFAGFSV 294
T++ +V+NP+ HS P +HN AF T NG YV ++ D+ E G ++
Sbjct: 7 TRLAAVVANPIKHSISPFIHNRAFEATATNGAYVAWEIEVSDLAETVANIRRYQMFGINL 66
Query: 295 GIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALRERQG 354
+P+KE + DE+ A+ IGAVNT++ + DG L+GYNTD + ++
Sbjct: 67 SMPYKEQVIPYLDELSDEARLIGAVNTVVNQ--DGTLIGYNTDGKGFFKSL--------- 115
Query: 355 INGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRG-ARVIIFNR--NYERAKALADAVS 411
S T I G+ L+GAGGA +++ A G +++ +F R + E+ + D +
Sbjct: 116 ----PSFT--ITGEKMTLLGAGGAAKSILAQAILDGVSQISVFVRSVSMEKTRPYLDKLQ 169
Query: 412 GEALHFE---YLHEFFPE------KGMILANASAIGMEPNSDQSPVPKE-ALKAYELVFD 461
E F+ Y E PE + +L NA+++GM+ S SPVP+ L LV D
Sbjct: 170 -EKTGFKVDLYALEDVPELQARIAESDLLVNATSVGMDGQS--SPVPENIVLPETLLVAD 226
Query: 462 AVYTPRNTRLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRKLVLEQF 518
+Y P T L+ A G VV+G+ M + QA F+L+TG P + + + + E++
Sbjct: 227 IIYKPFETPFLKWARSQGNPVVNGLGMLLYQAAAAFQLWTGKEMPTEEIWQSLTEKY 283
>gi|238925196|ref|YP_002938713.1| AroE3 [Eubacterium rectale ATCC 33656]
gi|238876872|gb|ACR76579.1| AroE3 [Eubacterium rectale ATCC 33656]
gi|291525822|emb|CBK91409.1| shikimate dehydrogenase [Eubacterium rectale DSM 17629]
gi|291527450|emb|CBK93036.1| shikimate dehydrogenase [Eubacterium rectale M104/1]
Length = 289
Score = 121 bits (303), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 99/299 (33%), Positives = 146/299 (48%), Gaps = 31/299 (10%)
Query: 231 EHINPDTKIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLV--DDVKEFFRTYSGTD 288
+ I+ T + L+ +PVGHS P ++N +F + YV + D VK+ +
Sbjct: 3 KRISGHTGLLALIGSPVGHSGSPAMYNYSFEKLGLDYAYVAFDIKEDKVKDAIAAMKTFN 62
Query: 289 FAGFSVGIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDA 348
G +V +P K A DE+ P A+ IGA+NTI+ +GKL G+ TD E + ++D
Sbjct: 63 MRGCNVTMPDKVEAAKYMDELSPAAQIIGAINTIVND--NGKLTGHITDGEGFVHNLKD- 119
Query: 349 LRERQGINGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGAR-VIIFNRN---YER-- 402
H I GK + G GGA A+ GAR + IFN+N +ER
Sbjct: 120 ------------HGIDIKGKKITVAGGGGAATAIQVQCALDGAREITIFNKNDAFFERTL 167
Query: 403 --AKALADAVSGEALHFEYLHEFFP-----EKGMILANASAIGMEPNSDQSPVPK-EALK 454
A+ + AV ++ + + + I ANA+ +GM+P DQS V A +
Sbjct: 168 QTAEKIKKAVPECVVNVYDIDDTAKMTEEIQSSDIFANATIVGMKPLDDQSVVKDLSAFR 227
Query: 455 AYELVFDAVYTPRNTRLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRKL 513
+V DAVY P T+LLREA E G T V G M + Q + F+L+TG P D ++KL
Sbjct: 228 PGLVVADAVYNPEETKLLREAKEAGCTCVGGKGMLLWQGVAAFKLYTGQDMPVDDVKKL 286
>gi|47094716|ref|ZP_00232331.1| shikimate 5-dehydrogenase [Listeria monocytogenes str. 1/2a F6854]
gi|254911162|ref|ZP_05261174.1| shikimate 5-dehydrogenase [Listeria monocytogenes J2818]
gi|254935490|ref|ZP_05267187.1| shikimate 5-dehydrogenase [Listeria monocytogenes F6900]
gi|386046141|ref|YP_005964473.1| shikimate 5-dehydrogenase [Listeria monocytogenes J0161]
gi|47016856|gb|EAL07774.1| shikimate 5-dehydrogenase [Listeria monocytogenes str. 1/2a F6854]
gi|258608067|gb|EEW20675.1| shikimate 5-dehydrogenase [Listeria monocytogenes F6900]
gi|293589089|gb|EFF97423.1| shikimate 5-dehydrogenase [Listeria monocytogenes J2818]
gi|345533132|gb|AEO02573.1| shikimate 5-dehydrogenase [Listeria monocytogenes J0161]
Length = 291
Score = 121 bits (303), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 84/300 (28%), Positives = 146/300 (48%), Gaps = 30/300 (10%)
Query: 231 EHINPDTKIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLVDD--VKEFFRTYSGTD 288
E I T++ GL++ P+ HS P +HN AF + +Y+ V D +K+ + + +
Sbjct: 7 ERITGHTELIGLIATPIRHSLSPTMHNEAFAKLGLDYVYLAFEVGDKELKDVVQGFRAMN 66
Query: 289 FAGFSVGIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDA 348
G++V +P+K D++ P A+ +GAVNT++ DG L G+ TD + A+++A
Sbjct: 67 LRGWNVSMPNKTNIHKYLDKLSPAAELVGAVNTVVND--DGVLTGHITDGTGYMRALKEA 124
Query: 349 LRERQGINGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGARVI-IFNRN---YERAK 404
+ I GK + GAGGA A+ A G + I IFNR Y A+
Sbjct: 125 GHD-------------IIGKKMTICGAGGAATAICIQAALDGVKEISIFNRKDDFYANAE 171
Query: 405 ALADAVSGEA------LHFEYLHEFFPE--KGMILANASAIGMEPNSDQSPVPK-EALKA 455
+ ++ + E + E + +I NA+ +GM+P ++ +P + L+
Sbjct: 172 KTVEKINSKTDCKAQLFDIENHEQLRKEIAESVIFTNATGVGMKPFEGETLLPSADMLRP 231
Query: 456 YELVFDAVYTPRNTRLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRKLVL 515
+V D VY P TRLL A E G ++G+ M + Q F ++T P D++++++
Sbjct: 232 ELIVSDVVYKPTKTRLLEIAEEQGCQTLNGLGMMLWQGAKAFEIWTHKEMPVDYIKEILF 291
>gi|434394200|ref|YP_007129147.1| shikimate dehydrogenase [Gloeocapsa sp. PCC 7428]
gi|428266041|gb|AFZ31987.1| shikimate dehydrogenase [Gloeocapsa sp. PCC 7428]
Length = 287
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 79/299 (26%), Positives = 145/299 (48%), Gaps = 29/299 (9%)
Query: 233 INPDTKIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLV--DDVKEFFRTYSGTDFA 290
I TK+ G++ PV HS P +HN A H + + +Y+P+ V + + F + +
Sbjct: 2 ITGKTKLLGVMGYPVEHSMSPAMHNAAIAHLKLDYVYLPLSVKPEALTTAFAGLAAINCT 61
Query: 291 GFSVGIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALR 350
GF+V IPHK+ + E+ P+A+++GAVNT+ R+ VG NTD ++ ++D
Sbjct: 62 GFNVTIPHKQAILPLLSEISPVAQAVGAVNTVWRQ--GDAWVGTNTDIVGFLAPLQDMNC 119
Query: 351 ERQGINGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGARVI-IFNRNYERAKAL--- 406
+ + +++G GGA RA+ G I + RN ++ +
Sbjct: 120 DWN-------------SAVALILGYGGAARAVVAACAQLGCPTIHVIGRNLQKLQQFSAS 166
Query: 407 ---ADAVSGEALH-FEYLHEFFPEKGMILANASAIGMEPNSDQSPVPKEA---LKAYELV 459
AD +H ++ L + P+ +L N + +GM P+++ SP+ L +
Sbjct: 167 WHDADITDKLQVHVWDKLPQLIPQ-ATLLVNTTPVGMHPHAEASPLSVAEMMLLPPNAIA 225
Query: 460 FDAVYTPRNTRLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRKLVLEQF 518
+D +YTP T+ L++A + GA + G EM ++Q +++ P + MR+ + +Q
Sbjct: 226 YDLIYTPSPTQFLQQAEKQGAIAIDGREMLVQQGAAALKIWLQQPVPVEVMRRALQQQL 284
>gi|195953557|ref|YP_002121847.1| shikimate 5-dehydrogenase [Hydrogenobaculum sp. Y04AAS1]
gi|195933169|gb|ACG57869.1| shikimate 5-dehydrogenase [Hydrogenobaculum sp. Y04AAS1]
Length = 273
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 81/283 (28%), Positives = 141/283 (49%), Gaps = 30/283 (10%)
Query: 234 NPDTKIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLV--DDVKEFFRTYSGTDFAG 291
N T +G+ PV HS P+ + AF N IY+P V +D++ + G
Sbjct: 6 NGKTLCYGIFGYPVKHSLSPVFQSFAFSKKNINAIYMPFEVKPEDLEIAIKGAKAMSIKG 65
Query: 292 FSVGIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALRE 351
++ IPHKE + D + K IG+ NT+ + + YNTD + AL E
Sbjct: 66 LNITIPHKENVLEFVDVISDDVKKIGSCNTLFFE--ENIIKAYNTDY----IGFKRALEE 119
Query: 352 RQGINGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGARVIIFNRNYERAKALADAVS 411
+ +NG K +++GAGG +A+ + S G +V + NR E+A L +
Sbjct: 120 KTSLNG----------KKALVLGAGGTSKAIIYALTSSGVKVYLHNRTIEKALKLKEIFD 169
Query: 412 GEAL-HFEYLHEFFPEKGMILANASAIGMEPNSDQSPVPKEALKAYELVFDAVYTPRNTR 470
E + H E + ++ I+ N +++G++ + D++ + + A+ +VFD +Y ++T
Sbjct: 170 LEVVGHIEDILQYVD----IIVNTTSVGLK-DDDKALFDYDKISAHHIVFDVIY--KDTA 222
Query: 471 LLREAAEVGATVVSGVEMFIRQALGQFRLFTG----GLAPEDF 509
L+++A E GA V+G+ M + Q L FR++TG +AP+ F
Sbjct: 223 LIKKAKEKGAVAVNGLPMLVYQGLESFRIWTGVDAFDIAPQIF 265
>gi|217965421|ref|YP_002351099.1| shikimate 5-dehydrogenase [Listeria monocytogenes HCC23]
gi|386007213|ref|YP_005925491.1| aroE-1 [Listeria monocytogenes L99]
gi|386025803|ref|YP_005946579.1| shikimate 5-dehydrogenase [Listeria monocytogenes M7]
gi|217334691|gb|ACK40485.1| shikimate 5-dehydrogenase [Listeria monocytogenes HCC23]
gi|307570023|emb|CAR83202.1| aroE-1 [Listeria monocytogenes L99]
gi|336022384|gb|AEH91521.1| shikimate 5-dehydrogenase [Listeria monocytogenes M7]
Length = 291
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 84/300 (28%), Positives = 146/300 (48%), Gaps = 30/300 (10%)
Query: 231 EHINPDTKIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLVDD--VKEFFRTYSGTD 288
E I T++ GL++ P+ HS P +HN AF + +Y+ V D +K+ + + +
Sbjct: 7 ERITGHTELIGLIATPIRHSLSPTMHNEAFAKLGLDYVYLAFEVGDKELKDVVQGFRAMN 66
Query: 289 FAGFSVGIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDA 348
G++V +P+K D++ P A+ +GAVNT++ DG L G+ TD + A+++A
Sbjct: 67 LRGWNVSMPNKTNIHKYLDKLSPAAELVGAVNTVVND--DGVLTGHITDGTGYMRALKEA 124
Query: 349 LRERQGINGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGARVI-IFNRN---YERAK 404
+ I GK + GAGGA A+ A G + I IFNR Y A+
Sbjct: 125 -------------GNDIIGKKMTICGAGGAATAICIQAALDGVKEISIFNRKDDFYANAE 171
Query: 405 ALADAVSGEA------LHFEYLHEFFPE--KGMILANASAIGMEPNSDQSPVPK-EALKA 455
+ ++ + E + E + +I NA+ +GM+P ++ +P + L+
Sbjct: 172 KTVEKINSKTDCKAQLFDIEDHEQLRKEIAESVIFTNATGVGMKPFEGETLLPSADMLRP 231
Query: 456 YELVFDAVYTPRNTRLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRKLVL 515
+V D VY P TRLL A E G ++G+ M + Q F ++T P D++++++
Sbjct: 232 ELIVSDVVYKPTKTRLLEIAEEQGCQTLNGLGMMLWQGAKAFEIWTHKEMPVDYIKEILF 291
>gi|340344441|ref|ZP_08667573.1| Shikimate dehydrogenase [Candidatus Nitrosoarchaeum koreensis MY1]
gi|339519582|gb|EGP93305.1| Shikimate dehydrogenase [Candidatus Nitrosoarchaeum koreensis MY1]
Length = 273
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 82/287 (28%), Positives = 147/287 (51%), Gaps = 26/287 (9%)
Query: 237 TKIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLV--DDVKEFFRTYSGTDFAGFSV 294
+K F ++ +P+ HS P +H+ AFR + Y+ + D+++E + +GF+V
Sbjct: 2 SKTFAVIGDPIDHSLSPNIHSAAFRELNLDCSYIAYKIAKDELEEGIESLKKIKISGFNV 61
Query: 295 GIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALRERQG 354
IPHK + D++ IGAVNT+ +G L GYNTD + + + ++
Sbjct: 62 TIPHKVEMMKYLDKLDESCSIIGAVNTVTND--NGILKGYNTDMDGFLEPFK-----KRN 114
Query: 355 INGVASHTSPIAGKIFVLVGAGGAGRALAFG-AKSRGARVIIFNRNYERAKALAD----- 408
+N I +L+GAGGA RA+ G AK + I NR E A +++
Sbjct: 115 LN--------IRNLKVLLLGAGGAARAIVVGFAKEHAKSITIANRTLENANKISEFANKI 166
Query: 409 AVSGEALHFEYLHEFFPEKGMILANASAIGMEPNSDQSPVPKEALKAYELVFDAVYTPRN 468
+ + + + E +I+ NA+++G++ ++ S + + + + +V+D VY+P N
Sbjct: 167 GLKANPIRIDEIGETTKNYDVIV-NATSVGLK--NEPSIISLDGINSKTIVYDIVYSPIN 223
Query: 469 TRLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRKLVL 515
T +++A E GA V+ G EM + QA F+++ G AP + M+K +L
Sbjct: 224 TDFIKKAKEKGAIVIYGYEMLLGQASRAFQIWHGVEAPYNAMKKALL 270
>gi|188580745|ref|YP_001924190.1| shikimate 5-dehydrogenase [Methylobacterium populi BJ001]
gi|179344243|gb|ACB79655.1| shikimate 5-dehydrogenase [Methylobacterium populi BJ001]
Length = 278
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 102/275 (37%), Positives = 140/275 (50%), Gaps = 28/275 (10%)
Query: 242 LVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLV--DDVKEFFRTYSGTDFAGFSVGIPHK 299
+V +P+ HS+ P++H G Y + V DD FFR + FAG +V IPHK
Sbjct: 7 VVGHPIRHSRSPLIHGHWLAEHGLAGTYERLDVAPDDFAAFFRALPASGFAGGNVTIPHK 66
Query: 300 EPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALRERQGINGVA 359
E A D + AK IGAVNT+I G++ G NTD I+ ++ +L E G
Sbjct: 67 EAAFRLADSLTERAKKIGAVNTLIVE--GGRVRGDNTDAPGFIAHLDRSLGE-----GWP 119
Query: 360 SHTSPIAGKIFVLVGAGGAGRALAFGAKSRGARVIIFNRNYERAKALADAVSG--EALHF 417
T G +++GAGGA RA+ G RG RV + NR+ ERA+ALA+ G EAL +
Sbjct: 120 ERT----GGTALVLGAGGAARAIVVGLVERGMRVRVANRSPERARALAELDPGHVEALAW 175
Query: 418 EYLHEFFPEKGMILANASAIGMEPNS----DQSPVPKEALKAYELVFDAVYTPRNTRLLR 473
E + E G+ L N +++GM + D +P+P+ A V D VY P T LL
Sbjct: 176 EAVPAALSETGL-LVNTTSLGMAGHPPLALDLAPLPERA-----AVADIVYVPLETPLLA 229
Query: 474 EAAEVGATVVSGVEMFIRQAL-GQFRLFTGGLAPE 507
A G V G+ M + QA+ G F F GL PE
Sbjct: 230 AARARGLAAVDGLGMLLHQAVPGFFAWF--GLRPE 262
>gi|153953639|ref|YP_001394404.1| shikimate 5-dehydrogenase [Clostridium kluyveri DSM 555]
gi|146346520|gb|EDK33056.1| AroE3 [Clostridium kluyveri DSM 555]
Length = 289
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 90/301 (29%), Positives = 145/301 (48%), Gaps = 33/301 (10%)
Query: 233 INPDTKIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLV--DDVKEFFRTYSGTDFA 290
I+ T + GL+ +PV HSK P+++N F + +Y+ V + V +
Sbjct: 5 ISGKTGLLGLIGDPVDHSKSPVMYNYGFEKLNLDYVYLAFQVPLEKVPDAITAIKTFKMK 64
Query: 291 GFSVGIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALR 350
G +V +P K V DE+ P A+ IGAVNTI+ +GKL G+ TD + ++++
Sbjct: 65 GSNVTMPCKSEVVKYMDELSPAARIIGAVNTIVND--NGKLTGHITDGVGFVRSLKE--- 119
Query: 351 ERQGINGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGARVI-IFNRN---YERAKAL 406
+G+ + GK ++G+GGA A+ G++ I IFN YERA+
Sbjct: 120 --EGVE--------VKGKKITIMGSGGAATAIQVQCALDGSKEISIFNIKDNFYERAQKN 169
Query: 407 ADAVSGEA----------LHFEYLHEFFPEKGMILANASAIGMEPNSDQSPVPKEALKAY 456
+ + E E L+E IL NA+ +GM PN D+S + ++
Sbjct: 170 VETIKKEVPDCTVNLYDLNDTEKLNEEVASSD-ILINATLVGMHPNEDESNIKDTSIFRK 228
Query: 457 ELVF-DAVYTPRNTRLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRKLVL 515
ELV D VY P+ T+ L+ A G +V G+ M + Q F+L+TG P D +++L
Sbjct: 229 ELVVADTVYHPKKTKFLKGAEAAGCKIVGGLGMLLWQGAEAFKLYTGLEMPVDEIKELYF 288
Query: 516 E 516
+
Sbjct: 289 K 289
>gi|289433772|ref|YP_003463644.1| hypothetical protein lse_0405 [Listeria seeligeri serovar 1/2b str.
SLCC3954]
gi|289170016|emb|CBH26556.1| aroE-1 [Listeria seeligeri serovar 1/2b str. SLCC3954]
Length = 291
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 84/300 (28%), Positives = 146/300 (48%), Gaps = 30/300 (10%)
Query: 231 EHINPDTKIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLVDD--VKEFFRTYSGTD 288
E I T++ GL++ P+ HS P +HN AF + +Y+ V D +K+ + + +
Sbjct: 7 ERITGHTELIGLIATPIRHSLSPTMHNEAFAKLGLDYVYLAFEVGDKELKDVVQGFRAMN 66
Query: 289 FAGFSVGIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDA 348
G++V +P+K D++ P A+ +GAVNT++ DG L G+ TD + A+++A
Sbjct: 67 LRGWNVSMPNKTNIHKYLDKLSPAAELVGAVNTVVND--DGVLTGHITDGTGYMRALKEA 124
Query: 349 LRERQGINGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGARVI-IFNRN---YERAK 404
+ I GK + GAGGA A+ A G + I IFNR Y A+
Sbjct: 125 GHD-------------IIGKKMTICGAGGAATAICIQAALDGVKEISIFNRKDDFYANAE 171
Query: 405 ALADAVSGEALHFEYLHEFFPEK--------GMILANASAIGMEPNSDQSPVPK-EALKA 455
+ ++ + L + E+ +I NA+ +GM+P ++ +P + L+
Sbjct: 172 KTVEKINSKTDCKAQLFDIEDEERLRKEISESVIFTNATGVGMKPFEGETLLPSADMLRP 231
Query: 456 YELVFDAVYTPRNTRLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRKLVL 515
+V D VY P TRLL A E G ++G+ M + Q F ++T P D++++++
Sbjct: 232 ELIVSDVVYKPTKTRLLEIAEEQGCQTLNGLGMMLWQGAKAFEIWTHKEMPVDYIKEILF 291
>gi|408382533|ref|ZP_11180077.1| shikimate dehydrogenase [Methanobacterium formicicum DSM 3637]
gi|407814888|gb|EKF85511.1| shikimate dehydrogenase [Methanobacterium formicicum DSM 3637]
Length = 283
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 91/281 (32%), Positives = 128/281 (45%), Gaps = 28/281 (9%)
Query: 233 INPDTKIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLVD--DVKEFFRTYSGTDFA 290
I T + G++ +PV HS P +HN AF + + +YVP V ++
Sbjct: 2 ITGKTGLVGIMGDPVEHSLSPPMHNAAFHQLKLDYVYVPFHVKRGNLASAIEGARTMGIK 61
Query: 291 GFSVGIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALR 350
G ++ IPHK + DE+ A+ IGAVNT+ + + K VGYNTD A+ AIE+
Sbjct: 62 GLNLTIPHKIEVINYLDELDEAAELIGAVNTV--KFTENKAVGYNTDGFGAVKAIEETTS 119
Query: 351 ERQGINGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGARVIIFNRNYERAKALADAV 410
+ + F L+ SR V+I NR E+A L D +
Sbjct: 120 VQDKKIIIIGAGGAARAISFQLL-------------LSRVGEVLIANRTREKACNLRDDL 166
Query: 411 SGE--------ALHFEYLHEFFPEKGMILANASAIGMEPNSDQSPVPKEALKAYELVF-D 461
L E E E +L N + +GM P+ D PV + +LV D
Sbjct: 167 KERFNTSLGCLGLDDELGIEL--EDTDVLINTTPVGMHPHQDDKPVVTSDMMHSDLVVND 224
Query: 462 AVYTPRNTRLLREAAEVGATVVSGVEMFIRQALGQFRLFTG 502
VY P T LLREA +VGAT V G +M I Q +G FR++TG
Sbjct: 225 IVYNPLETGLLREAGKVGATTVHGTKMLIYQGIGAFRIWTG 265
>gi|315301589|ref|ZP_07872696.1| shikimate 5-dehydrogenase [Listeria ivanovii FSL F6-596]
gi|313630036|gb|EFR98062.1| shikimate 5-dehydrogenase [Listeria ivanovii FSL F6-596]
Length = 291
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 84/300 (28%), Positives = 146/300 (48%), Gaps = 30/300 (10%)
Query: 231 EHINPDTKIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLVDD--VKEFFRTYSGTD 288
E I T++ GL++ P+ HS P +HN AF + +Y+ V D +K+ + + +
Sbjct: 7 ERITGHTELIGLIATPIRHSLSPTMHNEAFAKLGLDYVYLAFEVGDKELKDVVQGFRAMN 66
Query: 289 FAGFSVGIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDA 348
G++V +P+K D++ P A+ +GAVNT++ DG L G+ TD + A+++A
Sbjct: 67 LRGWNVSMPNKTNIHKYLDKLSPAAELVGAVNTVVND--DGVLTGHITDGTGYMRALKEA 124
Query: 349 LRERQGINGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGARVI-IFNRN---YERAK 404
+ I GK + GAGGA A+ A G + I IFNR Y A+
Sbjct: 125 GHD-------------IIGKKMTICGAGGAATAICIQAALDGVKEISIFNRKDDFYANAE 171
Query: 405 ALADAVSGEALHFEYLHEFFPEKGM--------ILANASAIGMEPNSDQSPVPK-EALKA 455
+ ++ + L + E+ + I NA+ +GM+P ++ +P + L+
Sbjct: 172 KTVEKINSKTDCKAQLFDMEDEEQLRKEISESVIFTNATGVGMKPFEGETLLPSADMLRP 231
Query: 456 YELVFDAVYTPRNTRLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRKLVL 515
+V D VY P TRLL A E G ++G+ M + Q F ++T P D++++++
Sbjct: 232 ELIVSDVVYKPTKTRLLEIAEEQGCQTLNGLGMMLWQGAKAFEIWTHREMPVDYIKEILF 291
>gi|255101876|ref|ZP_05330853.1| shikimate 5-dehydrogenase [Clostridium difficile QCD-63q42]
gi|255307745|ref|ZP_05351916.1| shikimate 5-dehydrogenase [Clostridium difficile ATCC 43255]
gi|423092746|ref|ZP_17080550.1| shikimate dehydrogenase [Clostridium difficile 70-100-2010]
gi|357553616|gb|EHJ35363.1| shikimate dehydrogenase [Clostridium difficile 70-100-2010]
Length = 287
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 89/301 (29%), Positives = 146/301 (48%), Gaps = 31/301 (10%)
Query: 232 HINPDTKIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVP--MLVDDVKEFFRTYSGTDF 289
I+ T +F L+ PVGHSK P+++N +F+ + Y+ + VD VKE +
Sbjct: 2 EISGRTGLFALIGTPVGHSKSPVMYNYSFKKLDLDYRYLAFDITVDKVKEALLAIKTFNI 61
Query: 290 AGFSVGIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDAL 349
G +V +P K DE+ P A+ IGA NTI+ +GKLVG+ TD + +++
Sbjct: 62 KGANVTMPCKSAVTEYMDELSPAARIIGACNTIVND--NGKLVGHITDGVGYVRNLKE-- 117
Query: 350 RERQGINGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGARVI-IFNRN---YERAKA 405
NGV + GK ++GAGGA A+ GAR I IFN Y+RA+
Sbjct: 118 ------NGV-----EVKGKKITIMGAGGAATAIQVQCALDGAREISIFNPKDDFYKRAEQ 166
Query: 406 LADAVSGEA-------LHFEYLHEFFPE--KGMILANASAIGMEPNSDQSPVPKEALKAY 456
+ + + E ++ + E IL NA+ IGM+P +++ + ++
Sbjct: 167 TVENIKKDVPECVVNLYDLEDTNKLYEEIQSSDILTNATLIGMKPYDNETNIKDTSVLRK 226
Query: 457 ELVF-DAVYTPRNTRLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRKLVL 515
+LV D VY P+ T+++ +A G + G+ M + Q F L+TG P + + +L
Sbjct: 227 DLVVTDVVYNPKKTKMIEDAEANGCKAIGGLGMLLYQGAEAFNLYTGLEMPVEEVNELCF 286
Query: 516 E 516
+
Sbjct: 287 K 287
>gi|219854261|ref|YP_002471383.1| hypothetical protein CKR_0918 [Clostridium kluyveri NBRC 12016]
gi|219567985|dbj|BAH05969.1| hypothetical protein [Clostridium kluyveri NBRC 12016]
Length = 296
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 90/301 (29%), Positives = 145/301 (48%), Gaps = 33/301 (10%)
Query: 233 INPDTKIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLV--DDVKEFFRTYSGTDFA 290
I+ T + GL+ +PV HSK P+++N F + +Y+ V + V +
Sbjct: 12 ISGKTGLLGLIGDPVDHSKSPVMYNYGFEKLNLDYVYLAFQVPLEKVPDAITAIKTFKMK 71
Query: 291 GFSVGIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALR 350
G +V +P K V DE+ P A+ IGAVNTI+ +GKL G+ TD + ++++
Sbjct: 72 GSNVTMPCKSEVVKYMDELSPAARIIGAVNTIVND--NGKLTGHITDGVGFVRSLKE--- 126
Query: 351 ERQGINGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGARVI-IFNRN---YERAKAL 406
+G+ + GK ++G+GGA A+ G++ I IFN YERA+
Sbjct: 127 --EGVE--------VKGKKITIMGSGGAATAIQVQCALDGSKEISIFNIKDNFYERAQKN 176
Query: 407 ADAVSGEA----------LHFEYLHEFFPEKGMILANASAIGMEPNSDQSPVPKEALKAY 456
+ + E E L+E IL NA+ +GM PN D+S + ++
Sbjct: 177 VETIKKEVPDCTVNLYDLNDTEKLNEEVASSD-ILINATLVGMHPNEDESNIKDTSIFRK 235
Query: 457 ELVF-DAVYTPRNTRLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRKLVL 515
ELV D VY P+ T+ L+ A G +V G+ M + Q F+L+TG P D +++L
Sbjct: 236 ELVVADTVYHPKKTKFLKGAEAAGCKIVGGLGMLLWQGAEAFKLYTGLEMPVDEIKELYF 295
Query: 516 E 516
+
Sbjct: 296 K 296
>gi|16799568|ref|NP_469836.1| shikimate 5-dehydrogenase [Listeria innocua Clip11262]
gi|423099588|ref|ZP_17087295.1| shikimate dehydrogenase [Listeria innocua ATCC 33091]
gi|24211466|sp|Q92EG7.1|AROE_LISIN RecName: Full=Shikimate dehydrogenase
gi|16412933|emb|CAC95725.1| lin0493 [Listeria innocua Clip11262]
gi|370793944|gb|EHN61747.1| shikimate dehydrogenase [Listeria innocua ATCC 33091]
Length = 291
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 84/300 (28%), Positives = 146/300 (48%), Gaps = 30/300 (10%)
Query: 231 EHINPDTKIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLVDD--VKEFFRTYSGTD 288
E I T++ GL++ P+ HS P +HN AF + +Y+ V D +K+ + + +
Sbjct: 7 ERITGHTELIGLIATPIRHSLSPTMHNEAFAKLGLDYVYLAFEVGDKELKDVVQGFRAMN 66
Query: 289 FAGFSVGIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDA 348
G++V +P+K D++ P A+ +GAVNT++ DG L G+ TD + A+++A
Sbjct: 67 LRGWNVSMPNKTNIHKYLDKLSPAAELVGAVNTVVND--DGVLTGHITDGTGYMRALKEA 124
Query: 349 LRERQGINGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGARVI-IFNRN---YERAK 404
+ I GK + GAGGA A+ A G + I IFNR Y A+
Sbjct: 125 GHD-------------IIGKKMTICGAGGAATAICIQAALDGVKEISIFNRKDDFYANAE 171
Query: 405 ALADAVS------GEALHFEYLHEFFPE--KGMILANASAIGMEPNSDQSPVPK-EALKA 455
+ ++ + E + E + +I NA+ +GM+P ++ +P + L+
Sbjct: 172 KTVEKINTKTNCKAQLFDMEDHEQLRKEIAESVIFTNATGVGMKPFEGETLLPSADMLRP 231
Query: 456 YELVFDAVYTPRNTRLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRKLVL 515
+V D VY P TRLL A E G ++G+ M + Q F ++T P D++++++
Sbjct: 232 ELIVSDVVYKPTKTRLLEIAEEQGCQTLNGLGMMLWQGAKAFEIWTHKEMPVDYIKEILF 291
>gi|357010654|ref|ZP_09075653.1| shikimate 5-dehydrogenase [Paenibacillus elgii B69]
Length = 289
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 97/295 (32%), Positives = 144/295 (48%), Gaps = 25/295 (8%)
Query: 233 INPDTKIFGLVSNPVGHSKGPILHNPAFRHTRFNGIY--VPMLVDDVKEFFRTYSGTDFA 290
++ T ++G+ +P+ HSK PI+ N AF N Y +L +K+ F
Sbjct: 6 LDSHTILYGVFGDPIRHSKSPIMLNRAFEAAGINAAYGAFHILPGTLKDAVAGIRALQFR 65
Query: 291 GFSVGIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALR 350
G +V IPHK ++ DE+ A +IGAVNTI+ G+L+GYNTD + + LR
Sbjct: 66 GVNVTIPHKVEVMSYLDEIDEGAHAIGAVNTIVNE--GGRLIGYNTDGIGYMRS----LR 119
Query: 351 ERQGINGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGARVIIFNRNYERAKALADA- 409
E GI S K+ ++ G A A+ + I NR E+A LA +
Sbjct: 120 EETGI-------SLKGRKVLMIGAGGAARGVGYALAREGAEHIYIANRTKEKALDLASSM 172
Query: 410 -----VSGEALHFEYLHEFFPEKGMILANASAIGMEPNSDQSPVPKEALKAYELVFDAVY 464
VSG L + + + E +I+ N + +GM PN D+ P+ ++ +V D VY
Sbjct: 173 SEFGSVSGHGL--DEISKLAGEAALIVNN-TLLGMHPNVDEVPMDISLIRPETVVSDLVY 229
Query: 465 TPRNTRLLREAA-EVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRKLVLEQF 518
P TR LREA + GA + SG+ MFI Q F +TG AP MR++V + F
Sbjct: 230 NPLITRFLREARDQRGAVIHSGLGMFIYQGAYAFEYWTGQPAPIAAMREVVEQSF 284
>gi|16800593|ref|NP_470861.1| hypothetical protein lin1525 [Listeria innocua Clip11262]
gi|16413998|emb|CAC96756.1| lin1525 [Listeria innocua Clip11262]
Length = 273
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 81/281 (28%), Positives = 136/281 (48%), Gaps = 20/281 (7%)
Query: 242 LVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLV--DDVKEFFRTYSGTDFAGFSVGIPHK 299
++ NP+ HS P + N F+ N Y +L+ D + + + GF++ P K
Sbjct: 6 VIGNPIRHSLSPAMQNRIFQELGMNAEYNSVLIEEDTFETEIKKLMDSGVRGFNITTPFK 65
Query: 300 EPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALRERQGINGVA 359
E + DE+ LA + GAVNT++R+ DGK G+NTD + + +E+ I +
Sbjct: 66 ERILPFLDELEDLAAASGAVNTVLRK--DGKWYGFNTDGKGYLEGLEE-------IRSIT 116
Query: 360 SHTSPIAGKIFVLVGAGGAGRALAFGAKSRG-ARVIIFNRNYERAKALA-DAVSGEALHF 417
S ++ GAGGA +A+ KS A++ + NR E+A + D + A+
Sbjct: 117 KDDS------ILITGAGGASKAIYLALKSHTEAKITVANRTTEKAIEMTKDNDNHHAMTL 170
Query: 418 EYLHEFFPEKGMILANASAIGMEPNSDQSPVPKEALKAYELVFDAVYTPRNTRLLREAAE 477
E + + +I+ S IG+E + ++SP+ L + D +Y P T L+EA +
Sbjct: 171 EQAEKELADFTIIIQTTS-IGLEASKNKSPISLSNLTKGTICSDIIYNPAETAFLKEAKK 229
Query: 478 VGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRKLVLEQF 518
GA +G+ MF+ Q F ++TG M++ VLEQ
Sbjct: 230 NGAITQNGLPMFVNQGALAFEIWTGIKPERSMMKEAVLEQL 270
>gi|448688527|ref|ZP_21694329.1| shikimate 5-dehydrogenase [Haloarcula japonica DSM 6131]
gi|445779193|gb|EMA30130.1| shikimate 5-dehydrogenase [Haloarcula japonica DSM 6131]
Length = 265
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 104/285 (36%), Positives = 135/285 (47%), Gaps = 25/285 (8%)
Query: 238 KIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPM--LVDDVKEFFRTYSGTDFAGFSVG 295
++GL+ NPVGHS P +H + + YV D E G +V
Sbjct: 2 DVYGLIGNPVGHSLSPPMHEAGYEALGLDARYVTFEPPADSGAEAIEAAETLGIDGLNVT 61
Query: 296 IPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKL-VGYNTDCESAISAIEDALRERQG 354
IP K+ + D PLA+ IGAVNT+ GK GYNTD A+ A+
Sbjct: 62 IPFKQDVLTAVDPA-PLAERIGAVNTV---DFTGKTPTGYNTDAVGAVRAL--------- 108
Query: 355 INGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGARVIIFNRNYERAKALADAVSGEA 414
+H V+VGAGGAGRA+AFG G V I NR +A LA V +
Sbjct: 109 -----AHHDVSLSGTAVVVGAGGAGRAVAFGLADEGLSVKIANRTASKADGLAAEVPNAS 163
Query: 415 LH-FEYLHEFFPEKGMILANASAIGMEPNSDQSPVPKEALKAYELVFDAVYTPRNTRLLR 473
H + L + IL N +++GME D++PVP +AL V DAVYTP TRLLR
Sbjct: 164 GHGLDSLSGLLADAD-ILVNCTSVGME--EDETPVPADALHGDLAVLDAVYTPIETRLLR 220
Query: 474 EAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRKLVLEQF 518
+AA GAT V G M + Q + F +TG AP D M + E
Sbjct: 221 DAAAAGATTVDGAWMLLYQGVEAFERWTGEDAPVDRMNSQLREHL 265
>gi|422411890|ref|ZP_16488849.1| shikimate dehydrogenase [Listeria innocua FSL S4-378]
gi|313620437|gb|EFR91825.1| shikimate dehydrogenase [Listeria innocua FSL S4-378]
Length = 308
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 84/303 (27%), Positives = 147/303 (48%), Gaps = 30/303 (9%)
Query: 231 EHINPDTKIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLVDD--VKEFFRTYSGTD 288
E I T++ GL++ P+ HS P +HN AF + +Y+ V D +K+ + + +
Sbjct: 14 ERITGHTELIGLIATPIRHSLSPTMHNEAFAKLGLDYVYLAFEVGDKELKDVVQGFRAMN 73
Query: 289 FAGFSVGIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDA 348
G++V +P+K D++ P A+ +GAVNT++ DG L G+ TD + A+++A
Sbjct: 74 LRGWNVSMPNKTNIHKYLDKLSPAAELVGAVNTVVND--DGVLTGHITDGTGYMRALKEA 131
Query: 349 LRERQGINGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGARVI-IFNRN---YERAK 404
+ I GK + GAGGA A+ A G + I IFNR Y A+
Sbjct: 132 GHD-------------IIGKKMTICGAGGAATAICIQAALDGVKEISIFNRKDDFYANAE 178
Query: 405 ALADAVS------GEALHFEYLHEFFPE--KGMILANASAIGMEPNSDQSPVPK-EALKA 455
+ ++ + E + E + +I NA+ +GM+P ++ +P + L+
Sbjct: 179 KTVEKINTKTNCKAQLFDMEDHEQLRKEIAESVIFTNATGVGMKPFEGETLLPSADMLRP 238
Query: 456 YELVFDAVYTPRNTRLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRKLVL 515
+V D VY P TRLL A E G ++G+ M + Q F ++T P D++++++
Sbjct: 239 ELIVSDVVYKPTKTRLLEIAEEQGCQTLNGLGMMLWQGAKAFEIWTHKEMPVDYIKEILX 298
Query: 516 EQF 518
+
Sbjct: 299 XKL 301
>gi|254976300|ref|ZP_05272772.1| shikimate 5-dehydrogenase [Clostridium difficile QCD-66c26]
gi|255093686|ref|ZP_05323164.1| shikimate 5-dehydrogenase [Clostridium difficile CIP 107932]
gi|255315436|ref|ZP_05357019.1| shikimate 5-dehydrogenase [Clostridium difficile QCD-76w55]
gi|255518101|ref|ZP_05385777.1| shikimate 5-dehydrogenase [Clostridium difficile QCD-97b34]
gi|255651217|ref|ZP_05398119.1| shikimate 5-dehydrogenase [Clostridium difficile QCD-37x79]
gi|260684282|ref|YP_003215567.1| shikimate 5-dehydrogenase [Clostridium difficile CD196]
gi|260687941|ref|YP_003219075.1| shikimate 5-dehydrogenase [Clostridium difficile R20291]
gi|384361925|ref|YP_006199777.1| shikimate 5-dehydrogenase [Clostridium difficile BI1]
gi|260210445|emb|CBA64887.1| NAD-dependent shikimate 5-dehydrogenase [Clostridium difficile
CD196]
gi|260213958|emb|CBE06042.1| NAD-dependent shikimate 5-dehydrogenase [Clostridium difficile
R20291]
Length = 287
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 88/301 (29%), Positives = 146/301 (48%), Gaps = 31/301 (10%)
Query: 232 HINPDTKIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVP--MLVDDVKEFFRTYSGTDF 289
I+ T +F L+ PVGHSK P+++N +F+ + Y+ + VD VKE +
Sbjct: 2 EISGRTGLFALIGTPVGHSKSPVMYNYSFKKLDLDYRYLAFDITVDKVKEALLAIKTFNI 61
Query: 290 AGFSVGIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDAL 349
G +V +P K DE+ P A+ IGA NTI+ +GKLVG+ TD + +++
Sbjct: 62 KGANVTMPCKSAVTEYMDELSPAARIIGACNTIVND--NGKLVGHITDGVGYVRNLKE-- 117
Query: 350 RERQGINGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGARVI-IFNRN---YERAKA 405
NG+ + GK ++GAGGA A+ GAR I IFN Y+RA+
Sbjct: 118 ------NGI-----EVKGKKITIMGAGGAATAIQVQCALDGAREISIFNAKDDFYKRAEQ 166
Query: 406 LADAVSGEA-------LHFEYLHEFFPE--KGMILANASAIGMEPNSDQSPVPKEALKAY 456
+ + + E ++ + E IL NA+ IGM+P +++ + ++
Sbjct: 167 TVENIKKDVPECVVNLYDLEDTNKLYEEIESSDILTNATLIGMKPYDNETNIKDTSVLRK 226
Query: 457 ELVF-DAVYTPRNTRLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRKLVL 515
+LV D VY P+ T+++ +A G + G+ M + Q F L+TG P + + +L
Sbjct: 227 DLVVTDVVYNPKKTKMIEDAEANGCKAIGGLGMLLYQGAEAFNLYTGLEMPVEEVNELCF 286
Query: 516 E 516
+
Sbjct: 287 K 287
>gi|402845078|ref|ZP_10893425.1| shikimate dehydrogenase [Klebsiella sp. OBRC7]
gi|423111495|ref|ZP_17099189.1| shikimate dehydrogenase [Klebsiella oxytoca 10-5243]
gi|423112487|ref|ZP_17100178.1| shikimate dehydrogenase [Klebsiella oxytoca 10-5245]
gi|376376694|gb|EHS89471.1| shikimate dehydrogenase [Klebsiella oxytoca 10-5243]
gi|376390864|gb|EHT03546.1| shikimate dehydrogenase [Klebsiella oxytoca 10-5245]
gi|402272678|gb|EJU21896.1| shikimate dehydrogenase [Klebsiella sp. OBRC7]
Length = 287
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 87/300 (29%), Positives = 148/300 (49%), Gaps = 30/300 (10%)
Query: 231 EHINPDTKIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLV--DDVKEFFRTYSGTD 288
E I T++ GL++ P+ HS P +HN AF H + +Y+ V +++K+ + +
Sbjct: 3 ERITGHTELIGLIATPIRHSMSPTMHNEAFAHLGLDYVYLAFEVGNEELKDVVQGFRALK 62
Query: 289 FAGFSVGIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDA 348
G +V +P+K D++ P A+ +GAVNT++ +G L G+ TD + A+++
Sbjct: 63 LRGCNVSMPNKTEICQYLDKLSPAAELVGAVNTVVND--NGVLTGHITDGTGYMRALKE- 119
Query: 349 LRERQGINGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGARVI-IFNR------NYE 401
+GI+ I GK ++GAGGA AL A G + I IFNR N E
Sbjct: 120 ----EGID--------IIGKKMTVLGAGGAATALCVQAALDGVKAISIFNRKDKFFANAE 167
Query: 402 RAKALADAVSGEALHFEYLHEFFP-----EKGMILANASAIGMEPNSDQSPVPKEA-LKA 455
+ A + +H L + + +IL NA+ +GM+P Q +P ++ L+
Sbjct: 168 QTVAKIRNNTNCEIHLFDLDDHDKLRAEIDSSVILTNATGVGMKPFEGQMLLPDDSFLRP 227
Query: 456 YELVFDAVYTPRNTRLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRKLVL 515
+V D VY PR T LL A + G ++G+ M + Q F ++TG P + ++ ++
Sbjct: 228 DLIVSDVVYNPRKTYLLEVAEKKGCRTINGLGMMLWQGARAFEIWTGKEMPVEHVKNILF 287
>gi|254829415|ref|ZP_05234102.1| shikimate 5-dehydrogenase [Listeria monocytogenes FSL N3-165]
gi|258601829|gb|EEW15154.1| shikimate 5-dehydrogenase [Listeria monocytogenes FSL N3-165]
Length = 291
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 84/300 (28%), Positives = 145/300 (48%), Gaps = 30/300 (10%)
Query: 231 EHINPDTKIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLVDD--VKEFFRTYSGTD 288
E I T++ GL++ P+ HS P +HN AF + +Y+ V D +K+ + + +
Sbjct: 7 ERITGHTELIGLIATPIRHSLSPTMHNEAFAKLGLDYVYLAFEVGDKELKDVVQGFRAMN 66
Query: 289 FAGFSVGIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDA 348
G++V +P+K D++ P A+ +GAVNT++ DG L G+ TD + A+++A
Sbjct: 67 LRGWNVSMPNKTNIHKYLDKLSPAAELVGAVNTVVND--DGVLTGHITDGTGYMRALKEA 124
Query: 349 LRERQGINGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGARVI-IFNRN---YERAK 404
+ I GK + GAGGA A+ A G + I IFNR Y A+
Sbjct: 125 GHD-------------IIGKKMTICGAGGAATAICIQAALDGVKEISIFNRKDDFYANAE 171
Query: 405 ALADAVSGEALHFEYLHEFFPEKGM--------ILANASAIGMEPNSDQSPVPK-EALKA 455
+ ++ + L + K + I NA+ +GM+P ++ +P + L+
Sbjct: 172 KTVEKINSKTDCKAQLFDIEDHKQLRKEIAESVIFTNATGVGMKPFEGETLLPSADMLRP 231
Query: 456 YELVFDAVYTPRNTRLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRKLVL 515
+V D VY P TRLL A E G ++G+ M + Q F ++T P D++++++
Sbjct: 232 ELIVSDVVYKPTKTRLLEIAEEQGCQTLNGLGMMLWQGAKAFEIWTHKEMPVDYIKEILF 291
>gi|16802533|ref|NP_464018.1| shikimate 5-dehydrogenase [Listeria monocytogenes EGD-e]
gi|46906736|ref|YP_013125.1| shikimate 5-dehydrogenase [Listeria monocytogenes serotype 4b str.
F2365]
gi|47093115|ref|ZP_00230891.1| shikimate 5-dehydrogenase [Listeria monocytogenes str. 4b H7858]
gi|116871881|ref|YP_848662.1| shikimate 5-dehydrogenase [Listeria welshimeri serovar 6b str.
SLCC5334]
gi|226223116|ref|YP_002757223.1| shikimate 5-dehydrogenase [Listeria monocytogenes serotype 4b str.
CLIP 80459]
gi|254824236|ref|ZP_05229237.1| shikimate 5-dehydrogenase [Listeria monocytogenes FSL J1-194]
gi|254853859|ref|ZP_05243207.1| shikimate 5-dehydrogenase [Listeria monocytogenes FSL R2-503]
gi|254933245|ref|ZP_05266604.1| shikimate 5-dehydrogenase [Listeria monocytogenes HPB2262]
gi|254992917|ref|ZP_05275107.1| shikimate 5-dehydrogenase [Listeria monocytogenes FSL J2-064]
gi|255026373|ref|ZP_05298359.1| shikimate 5-dehydrogenase [Listeria monocytogenes FSL J2-003]
gi|255522129|ref|ZP_05389366.1| shikimate 5-dehydrogenase [Listeria monocytogenes FSL J1-175]
gi|284800765|ref|YP_003412630.1| shikimate 5-dehydrogenase [Listeria monocytogenes 08-5578]
gi|284993951|ref|YP_003415719.1| shikimate 5-dehydrogenase [Listeria monocytogenes 08-5923]
gi|290894365|ref|ZP_06557329.1| shikimate 5-dehydrogenase [Listeria monocytogenes FSL J2-071]
gi|300765141|ref|ZP_07075127.1| shikimate 5-dehydrogenase [Listeria monocytogenes FSL N1-017]
gi|386042817|ref|YP_005961622.1| shikimate 5-dehydrogenase [Listeria monocytogenes 10403S]
gi|386049417|ref|YP_005967408.1| shikimate dehydrogenase [Listeria monocytogenes FSL R2-561]
gi|386731259|ref|YP_006204755.1| shikimate 5-dehydrogenase [Listeria monocytogenes 07PF0776]
gi|404280041|ref|YP_006680939.1| shikimate 5-dehydrogenase [Listeria monocytogenes SLCC2755]
gi|404282928|ref|YP_006683825.1| shikimate 5-dehydrogenase [Listeria monocytogenes SLCC2372]
gi|404285853|ref|YP_006692439.1| shikimate 5-dehydrogenase [Listeria monocytogenes serotype 7 str.
SLCC2482]
gi|404406955|ref|YP_006689670.1| shikimate 5-dehydrogenase [Listeria monocytogenes SLCC2376]
gi|404409722|ref|YP_006695310.1| shikimate 5-dehydrogenase [Listeria monocytogenes SLCC5850]
gi|405748855|ref|YP_006672321.1| shikimate 5-dehydrogenase [Listeria monocytogenes ATCC 19117]
gi|405751719|ref|YP_006675184.1| shikimate 5-dehydrogenase [Listeria monocytogenes SLCC2378]
gi|405754575|ref|YP_006678039.1| shikimate 5-dehydrogenase [Listeria monocytogenes SLCC2540]
gi|405757484|ref|YP_006686760.1| shikimate 5-dehydrogenase [Listeria monocytogenes SLCC2479]
gi|406703270|ref|YP_006753624.1| shikimate 5-dehydrogenase [Listeria monocytogenes L312]
gi|417314539|ref|ZP_12101236.1| shikimate 5-dehydrogenase [Listeria monocytogenes J1816]
gi|417316779|ref|ZP_12103412.1| shikimate 5-dehydrogenase [Listeria monocytogenes J1-220]
gi|424713379|ref|YP_007014094.1| Shikimate dehydrogenase [Listeria monocytogenes serotype 4b str.
LL195]
gi|424822233|ref|ZP_18247246.1| Shikimate dehydrogenase [Listeria monocytogenes str. Scott A]
gi|24211508|sp|Q8Y9N5.1|AROE_LISMO RecName: Full=Shikimate dehydrogenase
gi|67460331|sp|Q723F9.1|AROE_LISMF RecName: Full=Shikimate dehydrogenase
gi|16409866|emb|CAC98569.1| lmo0490 [Listeria monocytogenes EGD-e]
gi|46880001|gb|AAT03302.1| shikimate 5-dehydrogenase [Listeria monocytogenes serotype 4b str.
F2365]
gi|47018488|gb|EAL09245.1| shikimate 5-dehydrogenase [Listeria monocytogenes str. 4b H7858]
gi|116740759|emb|CAK19879.1| shikimate 5-dehydrogenase [Listeria welshimeri serovar 6b str.
SLCC5334]
gi|225875578|emb|CAS04281.1| Putative shikimate 5-dehydrogenase [Listeria monocytogenes serotype
4b str. CLIP 80459]
gi|258607244|gb|EEW19852.1| shikimate 5-dehydrogenase [Listeria monocytogenes FSL R2-503]
gi|284056327|gb|ADB67268.1| shikimate 5-dehydrogenase [Listeria monocytogenes 08-5578]
gi|284059418|gb|ADB70357.1| shikimate 5-dehydrogenase [Listeria monocytogenes 08-5923]
gi|290556072|gb|EFD89622.1| shikimate 5-dehydrogenase [Listeria monocytogenes FSL J2-071]
gi|293584805|gb|EFF96837.1| shikimate 5-dehydrogenase [Listeria monocytogenes HPB2262]
gi|293593469|gb|EFG01230.1| shikimate 5-dehydrogenase [Listeria monocytogenes FSL J1-194]
gi|300514112|gb|EFK41173.1| shikimate 5-dehydrogenase [Listeria monocytogenes FSL N1-017]
gi|328467560|gb|EGF38622.1| shikimate 5-dehydrogenase [Listeria monocytogenes J1816]
gi|328475795|gb|EGF46531.1| shikimate 5-dehydrogenase [Listeria monocytogenes J1-220]
gi|332310913|gb|EGJ24008.1| Shikimate dehydrogenase [Listeria monocytogenes str. Scott A]
gi|345536051|gb|AEO05491.1| shikimate 5-dehydrogenase [Listeria monocytogenes 10403S]
gi|346423263|gb|AEO24788.1| shikimate dehydrogenase [Listeria monocytogenes FSL R2-561]
gi|384390017|gb|AFH79087.1| shikimate 5-dehydrogenase [Listeria monocytogenes 07PF0776]
gi|404218055|emb|CBY69419.1| shikimate 5-dehydrogenase [Listeria monocytogenes ATCC 19117]
gi|404220919|emb|CBY72282.1| shikimate 5-dehydrogenase [Listeria monocytogenes SLCC2378]
gi|404223775|emb|CBY75137.1| shikimate 5-dehydrogenase [Listeria monocytogenes SLCC2540]
gi|404226676|emb|CBY48081.1| shikimate 5-dehydrogenase [Listeria monocytogenes SLCC2755]
gi|404229548|emb|CBY50952.1| shikimate 5-dehydrogenase [Listeria monocytogenes SLCC5850]
gi|404232430|emb|CBY53833.1| shikimate 5-dehydrogenase [Listeria monocytogenes SLCC2372]
gi|404235366|emb|CBY56768.1| shikimate 5-dehydrogenase [Listeria monocytogenes SLCC2479]
gi|404241104|emb|CBY62504.1| shikimate 5-dehydrogenase [Listeria monocytogenes SLCC2376]
gi|404244782|emb|CBY03007.1| shikimate 5-dehydrogenase [Listeria monocytogenes serotype 7 str.
SLCC2482]
gi|406360300|emb|CBY66573.1| shikimate 5-dehydrogenase [Listeria monocytogenes L312]
gi|424012563|emb|CCO63103.1| Shikimate dehydrogenase [Listeria monocytogenes serotype 4b str.
LL195]
Length = 291
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 84/300 (28%), Positives = 146/300 (48%), Gaps = 30/300 (10%)
Query: 231 EHINPDTKIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLVDD--VKEFFRTYSGTD 288
E I T++ GL++ P+ HS P +HN AF + +Y+ V D +K+ + + +
Sbjct: 7 ERITGHTELIGLIATPIRHSLSPTMHNEAFAKLGLDYVYLAFEVGDKELKDVVQGFRAMN 66
Query: 289 FAGFSVGIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDA 348
G++V +P+K D++ P A+ +GAVNT++ DG L G+ TD + A+++A
Sbjct: 67 LRGWNVSMPNKTNIHKYLDKLSPAAELVGAVNTVVND--DGVLTGHITDGTGYMRALKEA 124
Query: 349 LRERQGINGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGARVI-IFNRN---YERAK 404
+ I GK + GAGGA A+ A G + I IFNR Y A+
Sbjct: 125 GHD-------------IIGKKMTICGAGGAATAICIQAALDGVKEISIFNRKDDFYANAE 171
Query: 405 ALADAVSGEA------LHFEYLHEFFPE--KGMILANASAIGMEPNSDQSPVPK-EALKA 455
+ ++ + E + E + +I NA+ +GM+P ++ +P + L+
Sbjct: 172 KTVEKINSKTDCKAQLFDIEDHEQLRKEIAESVIFTNATGVGMKPFEGETLLPSADMLRP 231
Query: 456 YELVFDAVYTPRNTRLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRKLVL 515
+V D VY P TRLL A E G ++G+ M + Q F ++T P D++++++
Sbjct: 232 ELIVSDVVYKPTKTRLLEIAEEQGCQTLNGLGMMLWQGAKAFEIWTHKEMPVDYIKEILF 291
>gi|255022416|ref|ZP_05294402.1| shikimate 5-dehydrogenase [Listeria monocytogenes FSL J1-208]
gi|422808610|ref|ZP_16857021.1| Shikimate/quinate 5-dehydrogenase I beta [Listeria monocytogenes
FSL J1-208]
gi|378752224|gb|EHY62809.1| Shikimate/quinate 5-dehydrogenase I beta [Listeria monocytogenes
FSL J1-208]
Length = 291
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 84/300 (28%), Positives = 146/300 (48%), Gaps = 30/300 (10%)
Query: 231 EHINPDTKIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLVDD--VKEFFRTYSGTD 288
E I T++ GL++ P+ HS P +HN AF + +Y+ V D +K+ + + +
Sbjct: 7 ERITGHTELIGLIATPIRHSLSPTMHNEAFAKLGLDYVYLAFEVGDKELKDVVQGFRAMN 66
Query: 289 FAGFSVGIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDA 348
G++V +P+K D++ P A+ +GAVNT++ DG L G+ TD + A+++A
Sbjct: 67 LRGWNVSMPNKTNIHKYLDKLSPAAELVGAVNTVVND--DGVLTGHITDGTGYMRALKEA 124
Query: 349 LRERQGINGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGARVI-IFNRN---YERAK 404
+ I GK + GAGGA A+ A G + I IFNR Y A+
Sbjct: 125 GHD-------------IIGKKMTICGAGGAATAICIQAALDGVKEISIFNRKDDFYANAE 171
Query: 405 ALADAVSGEA------LHFEYLHEFFPE--KGMILANASAIGMEPNSDQSPVPK-EALKA 455
+ ++ + E + E + +I NA+ +GM+P ++ +P + L+
Sbjct: 172 KTVEKINSKTDCKAQLFDIEDHEQLRKEIAESVIFTNATGVGMKPFEGETLLPSADMLRP 231
Query: 456 YELVFDAVYTPRNTRLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRKLVL 515
+V D VY P TRLL A E G ++G+ M + Q F ++T P D++++++
Sbjct: 232 ELIVSDVVYKPTKTRLLEIAEEQGCQTLNGLGMMLWQGAKAFEIWTHKEMPVDYIKEILF 291
>gi|126700322|ref|YP_001089219.1| shikimate 5-dehydrogenase [Clostridium difficile 630]
gi|115251759|emb|CAJ69594.1| Shikimate dehydrogenase 2 [Clostridium difficile 630]
Length = 287
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 89/301 (29%), Positives = 146/301 (48%), Gaps = 31/301 (10%)
Query: 232 HINPDTKIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVP--MLVDDVKEFFRTYSGTDF 289
I+ T +F L+ PVGHSK P+++N +F+ + Y+ + VD VKE +
Sbjct: 2 EISGRTGLFALIGTPVGHSKSPVMYNYSFKKLDLDYRYLAFDITVDKVKEALLAIKTFNI 61
Query: 290 AGFSVGIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDAL 349
G +V +P K DE+ P A+ IGA NTI+ +GKLVG+ TD + +++
Sbjct: 62 KGANVTMPCKSAVTEYMDELSPAARIIGACNTIVND--NGKLVGHITDGVGYVRNLKE-- 117
Query: 350 RERQGINGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGARVI-IFNRN---YERAKA 405
NGV + GK ++GAGGA A+ GAR I IFN Y+RA+
Sbjct: 118 ------NGV-----EVKGKKITIMGAGGAATAIQVQCALDGAREISIFNPKDDFYKRAEQ 166
Query: 406 LADAVSGEA-------LHFEYLHEFFPE--KGMILANASAIGMEPNSDQSPVPKEALKAY 456
+ + + E ++ + E IL NA+ IGM+P +++ + ++
Sbjct: 167 TVENIKKDVPECVVNLYDLEDTNKLYEEIESSDILTNATLIGMKPYDNETNIKDTSVLRK 226
Query: 457 ELVF-DAVYTPRNTRLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRKLVL 515
+LV D VY P+ T+++ +A G + G+ M + Q F L+TG P + + +L
Sbjct: 227 DLVVTDVVYNPKKTKMIEDAEANGCKAIGGLGMLLYQGAEAFNLYTGLEMPVEEVNELCF 286
Query: 516 E 516
+
Sbjct: 287 K 287
>gi|425439684|ref|ZP_18820002.1| Shikimate dehydrogenase [Microcystis aeruginosa PCC 9717]
gi|389720036|emb|CCH96208.1| Shikimate dehydrogenase [Microcystis aeruginosa PCC 9717]
Length = 302
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 83/306 (27%), Positives = 147/306 (48%), Gaps = 27/306 (8%)
Query: 225 KQVYQLEHINPDTKIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLV--DDVKEFFR 282
K + + IN TK+ G++ +P+GH+ P +HN A N +Y+P+ + +++
Sbjct: 12 KPTFFMTIINGKTKLLGVIGDPIGHTLSPPMHNAAIDALGLNYVYLPLPIAPENLATAIA 71
Query: 283 TYSGTDFAGFSVGIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAI 342
S D GFSV IPHK + ++ A+ +GAVNT+ R + G NTD + +
Sbjct: 72 GLSAIDLQGFSVTIPHKLAIIPLLSQITEKARLVGAVNTVWRTETGWQ--GTNTDVDGFL 129
Query: 343 SAIEDALRERQGINGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRG-ARVIIFNRNYE 401
+ ++ ++ +N V ++G GGA RA+ G + + RN +
Sbjct: 130 APLKSLDKDWSQVNPV-------------ILGNGGAARAVVVACAQLGCGEIHVVGRNQK 176
Query: 402 RAKALADAVSGEALH-FEYLHEFFPEKGMI-----LANASAIGMEPNSDQSPVPKEALKA 455
+ ++ + +L+ +H + +G++ L N++ IGM P +QSPV E L
Sbjct: 177 KLDPFKESWANTSLYDLLEVHGWDELEGLVSTTELLINSTPIGMSPQGEQSPVELELLDL 236
Query: 456 YE---LVFDAVYTPRNTRLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRK 512
+ +D +Y PR T+ LR A G ++ G+EM + Q ++ G P MR+
Sbjct: 237 LPPSAIAYDLIYNPRPTKFLRLARTRGIRIIDGLEMLVNQGAIALEIWLGQPVPVSVMRE 296
Query: 513 LVLEQF 518
+L+QF
Sbjct: 297 ALLKQF 302
>gi|335040463|ref|ZP_08533591.1| Shikimate dehydrogenase [Caldalkalibacillus thermarum TA2.A1]
gi|334179652|gb|EGL82289.1| Shikimate dehydrogenase [Caldalkalibacillus thermarum TA2.A1]
Length = 302
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 96/301 (31%), Positives = 139/301 (46%), Gaps = 33/301 (10%)
Query: 238 KIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLV--DDVKEFFRTYSGTDFAGFSVG 295
++FGL ++PVGHS P++HN AF+ Y P + + + E G +V
Sbjct: 7 QLFGLFAHPVGHSLSPVMHNRAFQALGLPFYYHPFDIPPERLPEAVAGLKALGIRGINVT 66
Query: 296 IPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALRERQGI 355
IPHKE V DE+ P A++IGAVNT++ G+LVGYNTD + +L GI
Sbjct: 67 IPHKENIVPLLDELDPEAEAIGAVNTVVLSET-GRLVGYNTDGAGYV----QSLLSETGI 121
Query: 356 NGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRG-ARVIIFNRNYERAKALADAVSGEA 414
N ++ + A +A+A G A + I NR +A+ LA V A
Sbjct: 122 NLKETNVLLLGAGG--------AAKAIAVYLIKHGCASLTIANRTEHKAETLAHHVQRYA 173
Query: 415 LH-----------------FEYLHEFFPEKGMILANASAIGMEPNSDQSPVPKEALKAYE 457
+ L + ++ N + +GM PN Q P+ + L
Sbjct: 174 AQSHDGKGSSSPVRINVHSWSQLDRDGVKAYQLIINTTPVGMWPNVGQVPLELKELSPGT 233
Query: 458 LVFDAVYTPRNTRLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRKLVLEQ 517
+V D VY P T L+ A + GA V G+ MFI Q F+LFTG AP + MRK+V +Q
Sbjct: 234 IVSDIVYNPLQTAFLKAAEQRGAQVHQGLGMFIFQGALAFKLFTGYEAPLEVMRKVVEDQ 293
Query: 518 F 518
Sbjct: 294 L 294
>gi|300814852|ref|ZP_07095086.1| shikimate dehydrogenase [Peptoniphilus sp. oral taxon 836 str.
F0141]
gi|300511048|gb|EFK38314.1| shikimate dehydrogenase [Peptoniphilus sp. oral taxon 836 str.
F0141]
Length = 286
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 85/298 (28%), Positives = 146/298 (48%), Gaps = 29/298 (9%)
Query: 232 HINPDTKIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYV--PMLVDDVKEFFRTYSGTDF 289
+I+ +TK+ GL+ +P+ HS P +HN +F + + +Y+ P D+ + T
Sbjct: 2 NISGNTKLIGLLGDPISHSLSPFMHNLSFNKVKKDYVYLCLPTGKKDLGKVLETLKIVGA 61
Query: 290 AGFSVGIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDAL 349
G ++ P+K V DE + IG+ NTI+ + K+ GYNTD + ++++
Sbjct: 62 KGANITYPNKIEIVKYLDEASDEVQIIGSCNTILIDE-NKKIKGYNTDGRGFVKSLKN-- 118
Query: 350 RERQGINGVASHTSPIAGKIFVLVGAGGAGRALAF-----GAKSRGARVIIFNRNYERAK 404
++ I GK F ++G GGAG A+A G K + + F++ K
Sbjct: 119 -----------NSIDIKGKTFGIMGLGGAGSAIATCLGLQGLKRLYVKEVDFDKAKNVKK 167
Query: 405 ALADAVSGEALHFEYLHEFFP---EKGMILANASAIGMEPNSDQSPVPKEALKAYE-LVF 460
L + + G + + F EK ++ NA+ IGM + D SP+ E L+ + +++
Sbjct: 168 RLEEKIKGLEIILTKDQQDFAQNLEKMSLVINATPIGMGRSKDDSPMDPEYLRGFPVIIY 227
Query: 461 DAVYTPRNTRLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRKLVLEQF 518
D +Y+P T LLR+A G V +G++M I Q F ++TG E+ KLV E+
Sbjct: 228 DIIYSPLETTLLRKAKSYGLKVFNGIDMMINQGAISFNIWTG----EEMDTKLVKERI 281
>gi|452944376|ref|YP_007500541.1| shikimate 5-dehydrogenase [Hydrogenobaculum sp. HO]
gi|452882794|gb|AGG15498.1| shikimate 5-dehydrogenase [Hydrogenobaculum sp. HO]
Length = 273
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 79/283 (27%), Positives = 142/283 (50%), Gaps = 30/283 (10%)
Query: 234 NPDTKIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLV--DDVKEFFRTYSGTDFAG 291
N T +G+ PV HS P+ + AF N IY+P V +D++ + G
Sbjct: 6 NGQTLCYGIFGYPVKHSLSPVFQSFAFSKKNINAIYIPFEVKPEDLEIAIKGAKAMSVKG 65
Query: 292 FSVGIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALRE 351
++ IPHKE + D + K IG+ NT++ + + YNTD + AL E
Sbjct: 66 LNITIPHKESVLEFVDVISDDVKKIGSCNTLLFE--ENIIKAYNTDY----IGFKRALEE 119
Query: 352 RQGINGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGARVIIFNRNYERAKALADAVS 411
+ +NG K +++GAGG +A+ + S G +V + NR ++A L +
Sbjct: 120 KTSLNG----------KKALVLGAGGTSKAIIYALTSSGVKVYLHNRTIKKALKLKEIFD 169
Query: 412 GEAL-HFEYLHEFFPEKGMILANASAIGMEPNSDQSPVPKEALKAYELVFDAVYTPRNTR 470
E + H E + ++ I+ N +++G++ + D++ + + A+ +VFD +Y ++T
Sbjct: 170 VEVIGHIEDILQYVD----IIVNTTSVGLK-DDDEALFDYDKISAHHIVFDVIY--KDTA 222
Query: 471 LLREAAEVGATVVSGVEMFIRQALGQFRLFTG----GLAPEDF 509
L+++A E GA V+G+ M + Q L F+++TG +AP+ F
Sbjct: 223 LIKKAKEKGAVAVNGLPMLVYQGLESFKIWTGVDAFDIAPQIF 265
>gi|347447766|pdb|3TOZ|A Chain A, 2.2 Angstrom Crystal Structure Of Shikimate
5-Dehydrogenase From Listeria Monocytogenes In Complex
With Nad.
gi|347447767|pdb|3TOZ|B Chain B, 2.2 Angstrom Crystal Structure Of Shikimate
5-Dehydrogenase From Listeria Monocytogenes In Complex
With Nad.
gi|347447768|pdb|3TOZ|C Chain C, 2.2 Angstrom Crystal Structure Of Shikimate
5-Dehydrogenase From Listeria Monocytogenes In Complex
With Nad.
gi|347447769|pdb|3TOZ|D Chain D, 2.2 Angstrom Crystal Structure Of Shikimate
5-Dehydrogenase From Listeria Monocytogenes In Complex
With Nad.
gi|347447770|pdb|3TOZ|E Chain E, 2.2 Angstrom Crystal Structure Of Shikimate
5-Dehydrogenase From Listeria Monocytogenes In Complex
With Nad.
gi|347447771|pdb|3TOZ|F Chain F, 2.2 Angstrom Crystal Structure Of Shikimate
5-Dehydrogenase From Listeria Monocytogenes In Complex
With Nad.
gi|347447772|pdb|3TOZ|G Chain G, 2.2 Angstrom Crystal Structure Of Shikimate
5-Dehydrogenase From Listeria Monocytogenes In Complex
With Nad.
gi|347447773|pdb|3TOZ|H Chain H, 2.2 Angstrom Crystal Structure Of Shikimate
5-Dehydrogenase From Listeria Monocytogenes In Complex
With Nad.
gi|347948704|pdb|3TNL|A Chain A, 1.45 Angstrom Crystal Structure Of Shikimate
5-Dehydrogenase From Listeria Monocytogenes In Complex
With Shikimate And Nad.
gi|347948705|pdb|3TNL|B Chain B, 1.45 Angstrom Crystal Structure Of Shikimate
5-Dehydrogenase From Listeria Monocytogenes In Complex
With Shikimate And Nad.
gi|347948706|pdb|3TNL|C Chain C, 1.45 Angstrom Crystal Structure Of Shikimate
5-Dehydrogenase From Listeria Monocytogenes In Complex
With Shikimate And Nad.
gi|347948707|pdb|3TNL|D Chain D, 1.45 Angstrom Crystal Structure Of Shikimate
5-Dehydrogenase From Listeria Monocytogenes In Complex
With Shikimate And Nad
Length = 315
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 84/300 (28%), Positives = 146/300 (48%), Gaps = 30/300 (10%)
Query: 231 EHINPDTKIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLVDD--VKEFFRTYSGTD 288
E I T++ GL++ P+ HS P +HN AF + +Y+ V D +K+ + + +
Sbjct: 31 ERITGHTELIGLIATPIRHSLSPTMHNEAFAKLGLDYVYLAFEVGDKELKDVVQGFRAMN 90
Query: 289 FAGFSVGIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDA 348
G++V +P+K D++ P A+ +GAVNT++ DG L G+ TD + A+++A
Sbjct: 91 LRGWNVSMPNKTNIHKYLDKLSPAAELVGAVNTVVND--DGVLTGHITDGTGYMRALKEA 148
Query: 349 LRERQGINGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGARVI-IFNRN---YERAK 404
+ I GK + GAGGA A+ A G + I IFNR Y A+
Sbjct: 149 GHD-------------IIGKKMTICGAGGAATAICIQAALDGVKEISIFNRKDDFYANAE 195
Query: 405 ALADAVSGEA------LHFEYLHEFFPE--KGMILANASAIGMEPNSDQSPVPK-EALKA 455
+ ++ + E + E + +I NA+ +GM+P ++ +P + L+
Sbjct: 196 KTVEKINSKTDCKAQLFDIEDHEQLRKEIAESVIFTNATGVGMKPFEGETLLPSADMLRP 255
Query: 456 YELVFDAVYTPRNTRLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRKLVL 515
+V D VY P TRLL A E G ++G+ M + Q F ++T P D++++++
Sbjct: 256 ELIVSDVVYKPTKTRLLEIAEEQGCQTLNGLGMMLWQGAKAFEIWTHKEMPVDYIKEILF 315
>gi|386052745|ref|YP_005970303.1| shikimate 5-dehydrogenase [Listeria monocytogenes Finland 1998]
gi|346645396|gb|AEO38021.1| shikimate 5-dehydrogenase [Listeria monocytogenes Finland 1998]
Length = 291
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 84/300 (28%), Positives = 146/300 (48%), Gaps = 30/300 (10%)
Query: 231 EHINPDTKIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLVDD--VKEFFRTYSGTD 288
E I T++ GL++ P+ HS P +HN AF + +Y+ V D +K+ + + +
Sbjct: 7 ERITGHTELIGLIATPIRHSLSPTMHNEAFAKLGLDYVYLAFEVGDKELKDVVQGFRAMN 66
Query: 289 FAGFSVGIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDA 348
G++V +P+K D++ P A+ +GAVNT++ DG L G+ TD + A+++A
Sbjct: 67 LRGWNVSMPNKTNIHKYLDKLSPAAELVGAVNTVVND--DGVLTGHITDGTGYMRALKEA 124
Query: 349 LRERQGINGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGARVI-IFNRN---YERAK 404
+ I GK + GAGGA A+ A G + I IFNR Y A+
Sbjct: 125 GHD-------------IIGKKMTICGAGGAATAICIQAALDGVKEISIFNRKDDFYANAE 171
Query: 405 ALADAVSGEA------LHFEYLHEFFPE--KGMILANASAIGMEPNSDQSPVPK-EALKA 455
+ ++ + E + E + +I NA+ +GM+P ++ +P + L+
Sbjct: 172 KTVEKINSKTDCKAQLFDIEDHDQLRKEIAESVIFTNATGVGMKPFEGETLLPSADMLRP 231
Query: 456 YELVFDAVYTPRNTRLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRKLVL 515
+V D VY P TRLL A E G ++G+ M + Q F ++T P D++++++
Sbjct: 232 ELIVSDVVYKPTKTRLLEIAEEQGCQTLNGLGMMLWQGAKAFEIWTHKEMPVDYIKEILF 291
>gi|422408579|ref|ZP_16485540.1| shikimate dehydrogenase [Listeria monocytogenes FSL F2-208]
gi|313610573|gb|EFR85686.1| shikimate dehydrogenase [Listeria monocytogenes FSL F2-208]
Length = 298
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 84/300 (28%), Positives = 146/300 (48%), Gaps = 30/300 (10%)
Query: 231 EHINPDTKIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLVDD--VKEFFRTYSGTD 288
E I T++ GL++ P+ HS P +HN AF + +Y+ V D +K+ + + +
Sbjct: 14 ERITGHTELIGLIATPIRHSLSPTMHNEAFAKLGLDYVYLAFEVGDKELKDVVQGFRAMN 73
Query: 289 FAGFSVGIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDA 348
G++V +P+K D++ P A+ +GAVNT++ DG L G+ TD + A+++A
Sbjct: 74 LRGWNVSMPNKTNIHKYLDKLSPAAELVGAVNTVVND--DGVLTGHITDGTGYMRALKEA 131
Query: 349 LRERQGINGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGARVI-IFNRN---YERAK 404
+ I GK + GAGGA A+ A G + I IFNR Y A+
Sbjct: 132 GHD-------------IIGKKMTICGAGGAATAICIQAALDGVKEISIFNRKDDFYANAE 178
Query: 405 ALADAVSGEA------LHFEYLHEFFPE--KGMILANASAIGMEPNSDQSPVPK-EALKA 455
+ ++ + E + E + +I NA+ +GM+P ++ +P + L+
Sbjct: 179 KTVEKINSKTDCKAKLFDIEDHEQLRKEIAESVIFTNATGVGMKPFEGETLLPSADMLRP 238
Query: 456 YELVFDAVYTPRNTRLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRKLVL 515
+V D VY P TRLL A E G ++G+ M + Q F ++T P D++++++
Sbjct: 239 ELIVSDVVYKPTKTRLLEIAEEQGCQTLNGLGMMLWQGAKAFEIWTHKEMPVDYIKEILF 298
>gi|58040387|ref|YP_192351.1| shikimate 5-dehydrogenase [Gluconobacter oxydans 621H]
gi|81351527|sp|Q5FPK1.1|AROE_GLUOX RecName: Full=Shikimate dehydrogenase
gi|58002801|gb|AAW61695.1| Shikimate 5-dehydrogenase [Gluconobacter oxydans 621H]
Length = 279
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 98/274 (35%), Positives = 135/274 (49%), Gaps = 21/274 (7%)
Query: 233 INPDTKIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLVD--DVKEFFRTYSGTDFA 290
I+ TK+ G++ PV HS+ P++HN R NG YVP+ + R + F
Sbjct: 2 IDGHTKLAGVMGWPVEHSRSPLMHNHWCRVNGVNGAYVPLPTHPHGFDQALRGLAAAGFQ 61
Query: 291 GFSVGIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALR 350
G +V IPHKE A+ CDE+ P AK GAVNTI + G+++G DC ++
Sbjct: 62 GVNVTIPHKEAAMLACDELTPTAKRAGAVNTICF--VAGRIIG---DCTDGTGFCDN--- 113
Query: 351 ERQGINGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGARVIIFNRNYERAKALADAV 410
+++H IAG+ VL AGGA RA+A RG V+I NR ERA+AL +A+
Sbjct: 114 -------LSAHDVAIAGRAMVLG-AGGAARAVAAALLDRGCEVVIANRTLERAEALVEAL 165
Query: 411 SGEALHFEYLHEFFPEKGMILANASAIGM--EPNSDQSPVPKEALKAYELVFDAVYTPRN 468
G Y +L NA+++GM + D +EA V D VYTPR
Sbjct: 166 GGGEAVAWYEWPSLLSGCSLLVNATSMGMGGKAGLDWDAALREAAPGL-CVTDIVYTPRE 224
Query: 469 TRLLREAAEVGATVVSGVEMFIRQALGQFRLFTG 502
T LL A G V G+ M + QA FR + G
Sbjct: 225 TPLLLAAQARGLRTVDGLGMLVHQARAGFRAWFG 258
>gi|315640838|ref|ZP_07895937.1| shikimate dehydrogenase [Enterococcus italicus DSM 15952]
gi|315483377|gb|EFU73874.1| shikimate dehydrogenase [Enterococcus italicus DSM 15952]
Length = 330
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 95/323 (29%), Positives = 157/323 (48%), Gaps = 34/323 (10%)
Query: 214 SVPGLPTLVSLKQVY--QLEHINPDTKIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVP 271
S P + ++++ Q IN T++ G +NP HS P++HN AF N Y+
Sbjct: 19 SCPNEKVMFKKRRIWMDQAIEINGKTRLAGFFANPAKHSISPLMHNTAFSLLGINARYLA 78
Query: 272 MLV--DDVKEFFRTYSGTDFAGFSVGIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDG 329
+ D +K +T D G ++ +P K A++ DE+ A+ G++NT++ ++G
Sbjct: 79 FELPSDGLKRAIQTVRDFDMLGVNISMPFKIEAMSYMDELSDSARLSGSMNTVVN--LEG 136
Query: 330 KLVGYNTDCESAISAIEDALRERQGINGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSR 389
KL+GYNTD S L ER I G+ ++G GGA A+ A
Sbjct: 137 KLIGYNTDG----SGFFKDLSERD---------ISIVGQTMTVLGCGGAASAIVAQAALD 183
Query: 390 GARVI-IFNR------NYERAKALADAVSG---EALHFEYLHEFFP--EKGMILANASAI 437
GA+ I +FNR ++ + AL + E + + L + +L NA+++
Sbjct: 184 GAKKIYVFNRKGASFDSFRQRLALIHQTTNCQIELVPIDNLQMLAHAIDASRLLVNATSL 243
Query: 438 GMEPNSDQSPVPKEALK---AYELVFDAVYTPRNTRLLREAAEVGATVVSGVEMFIRQAL 494
GM+P+ +Q P+P+E+L+ A V D +Y P T+LL A E G +G+ M + Q
Sbjct: 244 GMKPHENQLPLPEESLQRLQASTAVVDIIYNPFETKLLTLAKEKGCQTANGLGMLLYQGA 303
Query: 495 GQFRLFTGGLAPEDFMRKLVLEQ 517
F L+TG P + + LVL++
Sbjct: 304 DAFELWTGQKMPTEEIYPLVLKE 326
>gi|423081389|ref|ZP_17069997.1| shikimate dehydrogenase [Clostridium difficile 002-P50-2011]
gi|357551055|gb|EHJ32859.1| shikimate dehydrogenase [Clostridium difficile 002-P50-2011]
Length = 287
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 88/301 (29%), Positives = 146/301 (48%), Gaps = 31/301 (10%)
Query: 232 HINPDTKIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVP--MLVDDVKEFFRTYSGTDF 289
I+ T +F L+ PVGHSK P+++N +F+ + Y+ + VD VKE +
Sbjct: 2 EISGRTGLFALIGTPVGHSKSPVMYNYSFKKLDLDYRYLAFDITVDKVKEALLAIKTFNI 61
Query: 290 AGFSVGIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDAL 349
G +V +P K DE+ P A+ IGA NTI+ +GKLVG+ TD + +++
Sbjct: 62 KGANVTMPCKSAVTEYMDELSPAARIIGACNTIVND--NGKLVGHITDGVGYVRNLKE-- 117
Query: 350 RERQGINGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGARVI-IFNRN---YERAKA 405
NGV + GK ++GAGGA A+ GAR I IFN Y+R++
Sbjct: 118 ------NGV-----EVKGKKITIMGAGGAATAIQVQCALDGAREISIFNTKDDFYKRSEQ 166
Query: 406 LADAVSGEA-------LHFEYLHEFFPE--KGMILANASAIGMEPNSDQSPVPKEALKAY 456
+ + + E ++ + E IL NA+ IGM+P +++ + ++
Sbjct: 167 TVENIKKDVPECVVNLYDLEDTNKLYEEIESSDILTNATLIGMKPYDNETNIKDTSVLRK 226
Query: 457 ELVF-DAVYTPRNTRLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRKLVL 515
+LV D VY P+ T+++ +A G + G+ M + Q F L+TG P + + +L
Sbjct: 227 DLVVTDVVYNPKKTKMIEDAEANGCKAIGGLGMLLYQGAEAFNLYTGLEMPVEEVNELCF 286
Query: 516 E 516
+
Sbjct: 287 K 287
>gi|423070585|ref|ZP_17059361.1| shikimate dehydrogenase [Streptococcus intermedius F0413]
gi|355365671|gb|EHG13393.1| shikimate dehydrogenase [Streptococcus intermedius F0413]
Length = 284
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 87/289 (30%), Positives = 141/289 (48%), Gaps = 33/289 (11%)
Query: 232 HINPDTKIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLV--DDVKEFFRTYSGTDF 289
I+ T++ +V+NP+ HS P +HN AF NG+Y+ + DD+K D
Sbjct: 2 KIDGYTRLAAVVANPIKHSISPFIHNAAFEQAGVNGVYLAWEISKDDLKATVENIRRYDM 61
Query: 290 AGFSVGIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDAL 349
G ++ +P+K+ + DE+ P A+ IGAVNT++ + +GKL+GYNTD + ++ +
Sbjct: 62 FGINLSMPYKQAVIPFLDELTPAAQMIGAVNTVVNQ--NGKLIGYNTDGKGFFMSLPSFV 119
Query: 350 RERQGINGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGA-RVIIFNR--NYERA--- 403
I GK +++GAGGA A+ A GA + +F R ++ER
Sbjct: 120 ---------------IKGKKMLILGAGGAATAIIVQAVLEGADEIFVFTRKTSFERVSQQ 164
Query: 404 -----KALADAVSGEALHFEYLHEFFPEKGMILANASAIGMEPNSDQSPVPKEA-LKAYE 457
+A + +S L L + +L N +++GM+ + SPVP L
Sbjct: 165 MKQIQQAASTKISVLLLEQRELLQEKLNVSALLVNGTSLGMDEKT--SPVPDTIRLSKNL 222
Query: 458 LVFDAVYTPRNTRLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAP 506
LV D +Y P T L+ A + V+G+ M + QA F+L+TG P
Sbjct: 223 LVADVIYQPFETPFLKWAKKQNVQAVNGLGMLLYQAAEAFKLWTGKDMP 271
>gi|422415991|ref|ZP_16492948.1| shikimate 5-dehydrogenase [Listeria innocua FSL J1-023]
gi|313623707|gb|EFR93855.1| shikimate 5-dehydrogenase [Listeria innocua FSL J1-023]
Length = 273
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 81/281 (28%), Positives = 136/281 (48%), Gaps = 20/281 (7%)
Query: 242 LVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLV--DDVKEFFRTYSGTDFAGFSVGIPHK 299
++ NP+ HS P + N F+ N Y +L+ D + + + GF++ P K
Sbjct: 6 VIGNPIRHSLSPAMQNRIFQELGMNAEYNSVLIEEDTFEAEVKKLMDSGVRGFNITTPFK 65
Query: 300 EPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALRERQGINGVA 359
E + DE+ LA + GAVNT++R+ DGK G+NTD + + +E+ I +
Sbjct: 66 ERILPFLDELEDLAAASGAVNTVLRK--DGKWYGFNTDGKGYLEGLEE-------IRSIT 116
Query: 360 SHTSPIAGKIFVLVGAGGAGRALAFGAKSR-GARVIIFNRNYERAKALA-DAVSGEALHF 417
S ++ GAGGA +A+ KS A++ + NR E+A + D + A+
Sbjct: 117 KDDS------ILITGAGGASKAIYLALKSHTDAKITVANRTTEKAIEMTKDNDNHHAMTL 170
Query: 418 EYLHEFFPEKGMILANASAIGMEPNSDQSPVPKEALKAYELVFDAVYTPRNTRLLREAAE 477
E + + +I+ S IG+E + ++SP+ L + D +Y P T L+EA +
Sbjct: 171 EQAEKELADFTIIIQTTS-IGLEASKNKSPISLSNLTKGTICSDIIYNPAETAFLKEAKK 229
Query: 478 VGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRKLVLEQF 518
GA +G+ MF+ Q F ++TG M++ VLEQ
Sbjct: 230 NGAITQNGLPMFVNQGALAFEIWTGIKPERSLMKEAVLEQL 270
>gi|422417941|ref|ZP_16494896.1| shikimate 5-dehydrogenase [Listeria seeligeri FSL N1-067]
gi|313634787|gb|EFS01220.1| shikimate 5-dehydrogenase [Listeria seeligeri FSL N1-067]
Length = 291
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 86/300 (28%), Positives = 149/300 (49%), Gaps = 30/300 (10%)
Query: 231 EHINPDTKIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLVDD--VKEFFRTYSGTD 288
E I T++ GL++ P+ HS P +HN AF + +Y+ V D +K+ + + +
Sbjct: 7 ERITGRTELIGLIATPIRHSLSPTMHNEAFAKLGLDYVYLAFEVGDKELKDVVQGFRAMN 66
Query: 289 FAGFSVGIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDA 348
G++V +P+K D++ P A+ +GAVNT++ DG L G+ TD + A+++A
Sbjct: 67 LRGWNVSMPNKTNIHKYLDKLSPAAELVGAVNTVVND--DGVLTGHITDGTGYMRALKEA 124
Query: 349 LRERQGINGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGARVI-IFNRN---YERAK 404
+ I GK + GAGGA A+ A G + I IFNR Y A+
Sbjct: 125 GHD-------------IIGKKMTICGAGGAATAICIQAALDGVKEISIFNRKDDFYANAQ 171
Query: 405 ALADAVSGE----ALHFEYL-HEFFPEK---GMILANASAIGMEPNSDQSPVPK-EALKA 455
+ ++ + A F+ HE ++ +I NA+ +GM+P ++ +P + L+
Sbjct: 172 KTVEKINSKTDCKAQLFDIEDHERLRKEISESVIFTNATGVGMKPFEGETLLPSADMLRP 231
Query: 456 YELVFDAVYTPRNTRLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRKLVL 515
+V D VY P TRLL A E G ++G+ M + Q F ++T P D++++++
Sbjct: 232 ELIVSDVVYKPTKTRLLEIAEEQGCQTLNGLGMMLWQGAKAFEIWTHKEMPVDYIKEILF 291
>gi|422414971|ref|ZP_16491928.1| shikimate 5-dehydrogenase [Listeria innocua FSL J1-023]
gi|313624974|gb|EFR94873.1| shikimate 5-dehydrogenase [Listeria innocua FSL J1-023]
Length = 301
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 84/303 (27%), Positives = 147/303 (48%), Gaps = 30/303 (9%)
Query: 231 EHINPDTKIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLVDD--VKEFFRTYSGTD 288
E I T++ GL++ P+ HS P +HN AF + +Y+ V D +K+ + + +
Sbjct: 7 ERITGHTELIGLIATPIRHSLSPTMHNEAFAKLGLDYVYLAFEVGDKELKDVVQGFRAMN 66
Query: 289 FAGFSVGIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDA 348
G++V +P+K D++ P A+ +GAVNT++ DG L G+ TD + A+++A
Sbjct: 67 LRGWNVSMPNKTNIHKYLDKLSPAAELVGAVNTVVND--DGVLTGHITDGTGYMRALKEA 124
Query: 349 LRERQGINGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGARVI-IFNRN---YERAK 404
+ I GK + GAGGA A+ A G + I IFNR Y A+
Sbjct: 125 GHD-------------IIGKKMTICGAGGAATAICIQAALDGVKEISIFNRKDDFYANAE 171
Query: 405 ALADAVS------GEALHFEYLHEFFPE--KGMILANASAIGMEPNSDQSPVPK-EALKA 455
+ ++ + E + E + +I NA+ +GM+P ++ +P + L+
Sbjct: 172 KTVEKINTKTNCKAQLFDIEDHEQLRKEIAESVIFTNATGVGMKPFEGETLLPSADMLRP 231
Query: 456 YELVFDAVYTPRNTRLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRKLVL 515
+V D VY P TRLL A E G ++G+ M + Q F ++T P D++++++
Sbjct: 232 ELIVSDVVYKPTKTRLLEIAEEQGCQTLNGLGMMLWQGAKAFEIWTHKEMPVDYIKEILX 291
Query: 516 EQF 518
+
Sbjct: 292 XKL 294
>gi|422421064|ref|ZP_16498017.1| shikimate 5-dehydrogenase [Listeria seeligeri FSL S4-171]
gi|313639412|gb|EFS04281.1| shikimate 5-dehydrogenase [Listeria seeligeri FSL S4-171]
Length = 291
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 86/300 (28%), Positives = 149/300 (49%), Gaps = 30/300 (10%)
Query: 231 EHINPDTKIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLVDD--VKEFFRTYSGTD 288
E I T++ GL++ P+ HS P +HN AF + +Y+ V D +K+ + + +
Sbjct: 7 ERITGHTELIGLIATPIRHSLSPTMHNEAFAKLGLDYVYLAFEVGDKELKDVVQGFRAMN 66
Query: 289 FAGFSVGIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDA 348
G++V +P+K D++ P A+ +GAVNT++ DG L G+ TD + A+++A
Sbjct: 67 LRGWNVSMPNKTNIHKYLDKLSPAAELVGAVNTVVND--DGVLTGHITDGTGYMRALKEA 124
Query: 349 LRERQGINGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGARVI-IFNRN---YERAK 404
+ I GK + GAGGA A+ A G + I IFNR Y A+
Sbjct: 125 GHD-------------IIGKKMTICGAGGAATAICIQAALDGVKEISIFNRKDDFYANAE 171
Query: 405 ALADAVSGE----ALHFEYL-HEFFPEK---GMILANASAIGMEPNSDQSPVPK-EALKA 455
+ ++ + A F+ HE ++ +I NA+ +GM+P ++ +P + L+
Sbjct: 172 KTVEKINSKTDCKAQLFDIEDHERLRKEISESVIFTNATGVGMKPFEGETLLPSADMLRP 231
Query: 456 YELVFDAVYTPRNTRLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRKLVL 515
+V D VY P TRLL A E G ++G+ M + Q F ++T P D++++++
Sbjct: 232 ELIVSDVVYKPTKTRLLEIAEEQGCQTLNGLGMMLWQGAKAFEIWTHKEMPVDYIKEILF 291
>gi|87301533|ref|ZP_01084373.1| shikimate / quinate 5-dehydrogenase [Synechococcus sp. WH 5701]
gi|87283750|gb|EAQ75704.1| shikimate / quinate 5-dehydrogenase [Synechococcus sp. WH 5701]
Length = 312
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 84/290 (28%), Positives = 141/290 (48%), Gaps = 28/290 (9%)
Query: 232 HINPDTKIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYV--PMLVDDVKEFFRTYSGTDF 289
I+ T + ++ +P+ HS P +HN A R + +Y+ P+ +D+ R D
Sbjct: 4 EISAHTSLVAVLGDPIRHSLSPAMHNAALRQLGLDWVYLALPVQANDLAVVVRALEAIDC 63
Query: 290 AGFSVGIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDAL 349
G +V +PHK E+ PLA+ +GAVNT++RR G +G NTD E ++ +
Sbjct: 64 RGLNVTLPHKRAVAELAAELTPLARRVGAVNTLVRRE-GGGWLGTNTDVEGFLAPL---- 118
Query: 350 RERQGINGVASHTSP-IAGKIFVLVGAGGAGRALAFGAKSRG-ARVIIFNRNYERAKA-- 405
+GI + P +AG +++G GG+ RA+ G R+ + R + A
Sbjct: 119 ---RGIANAEGVSVPDLAGGRALVLGCGGSARAVVAALVELGLERIQLAGRRPDALAAFQ 175
Query: 406 -----LADAVSGEALHFEY-----LHEFFPEKGMILANASAIGMEPNSDQSPVPK---EA 452
A +SG A L + E +++ N + +GM +S P+ +A
Sbjct: 176 AECGSWAAQLSGVAWPAAAGERGDLIKALAEADLVV-NTTPVGMGASSSACPLDAAELDA 234
Query: 453 LKAYELVFDAVYTPRNTRLLREAAEVGATVVSGVEMFIRQALGQFRLFTG 502
L+A L++D +YTPR +RLL+E + G V+ G+EM ++Q RL+ G
Sbjct: 235 LRAGSLIYDLIYTPRPSRLLQEGRQRGCGVLDGLEMLVQQGAAALRLWLG 284
>gi|422412979|ref|ZP_16489938.1| shikimate 5-dehydrogenase [Listeria innocua FSL S4-378]
gi|313618856|gb|EFR90731.1| shikimate 5-dehydrogenase [Listeria innocua FSL S4-378]
Length = 273
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 81/281 (28%), Positives = 136/281 (48%), Gaps = 20/281 (7%)
Query: 242 LVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLV--DDVKEFFRTYSGTDFAGFSVGIPHK 299
++ NP+ HS P + N F+ N Y +L+ D + + + GF++ P K
Sbjct: 6 VIGNPIRHSLSPAMQNRIFQELGMNAEYNSVLIEEDTFEVEIKKLMDSGVRGFNITTPFK 65
Query: 300 EPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALRERQGINGVA 359
E + DE+ LA + GAVNT++R+ DGK G+NTD + + +E+ I +
Sbjct: 66 ERILPFLDELEDLAAASGAVNTVLRK--DGKWYGFNTDGKGYLEGLEE-------IRSIT 116
Query: 360 SHTSPIAGKIFVLVGAGGAGRALAFGAKSR-GARVIIFNRNYERAKALA-DAVSGEALHF 417
S ++ GAGGA +A+ KS A++ + NR E+A + D + A+
Sbjct: 117 KDDS------ILITGAGGASKAIYLALKSHTDAKITVANRTTEKAIEMTKDNDNHHAMTL 170
Query: 418 EYLHEFFPEKGMILANASAIGMEPNSDQSPVPKEALKAYELVFDAVYTPRNTRLLREAAE 477
E + + +I+ S IG+E + ++SP+ L + D +Y P T L+EA +
Sbjct: 171 EQAEKELADFTIIIQTTS-IGLEASKNKSPISLSNLTKGTICSDIIYNPAETAFLKEAKK 229
Query: 478 VGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRKLVLEQF 518
GA +G+ MF+ Q F ++TG M++ VLEQ
Sbjct: 230 NGAITQNGLPMFVNQGALAFEIWTGIKPERSLMKEAVLEQL 270
>gi|253578605|ref|ZP_04855877.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39B_FAA]
gi|251850923|gb|EES78881.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39BFAA]
Length = 290
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 89/299 (29%), Positives = 146/299 (48%), Gaps = 31/299 (10%)
Query: 230 LEHINPDTKIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLVDD--VKEFFRTYSGT 287
+ +I T + L+ +PV HS P++HN +FR + +Y+ V++ +
Sbjct: 1 MNNITGHTGLTALLGSPVAHSISPLMHNESFRLLGLDYVYLCFDVNEETLPAAVAGLKTC 60
Query: 288 DFAGFSVGIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIED 347
GF++ +P+K V DE+ P A+ IGAVNT++ +GKL+GYNTD + ++ D
Sbjct: 61 GIRGFNLTMPNKNKIVELLDELSPEAQLIGAVNTVLND--NGKLIGYNTDGYGFMQSVRD 118
Query: 348 ALRERQGINGVASHTSPIAGKIFVLVGAGGAGRAL-AFGAKSRGARVIIF----NRNYER 402
A + I GK ++G GGA A+ A A A V IF +R + R
Sbjct: 119 AGHD-------------ITGKNITVMGVGGASMAICAQSALDGAASVHIFARRTSRYWNR 165
Query: 403 AKALADAVSGEA-----LHFEYLHEFFPE---KGMILANASAIGMEPNSDQSPVPKEALK 454
+ A+ +S + L H + + +L NA+++GM P+ D + + +L
Sbjct: 166 TQKFAENLSAKTGCQVCLFDNDDHTALRDSIAQSYLLINATSVGMVPDIDDTIIKDTSLF 225
Query: 455 AYELVF-DAVYTPRNTRLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRK 512
ELV D VY P+ TRLLREA G +G+ M + Q F+++TG P +++
Sbjct: 226 HPELVVADVVYEPQETRLLREAKATGCQTFNGMYMLLHQGAKAFQIWTGQEMPVSVIKE 284
>gi|317486523|ref|ZP_07945346.1| shikimate 5-dehydrogenase [Bilophila wadsworthia 3_1_6]
gi|316922198|gb|EFV43461.1| shikimate 5-dehydrogenase [Bilophila wadsworthia 3_1_6]
Length = 274
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 93/279 (33%), Positives = 137/279 (49%), Gaps = 34/279 (12%)
Query: 239 IFGLVSNPVGHSKGPILHNPAFRHTRFNGIYV--PMLVDDVKEFFRTYSGTDFAGFSVGI 296
+ G++ P+GHS P++HN AFR G+Y+ P+ + F + G S+ I
Sbjct: 9 LHGIIGYPLGHSMSPLMHNTAFRTLNLPGVYLSWPIEPGRLPAFVDAARLLNIRGCSITI 68
Query: 297 PHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDG-KLVGYNTDCESAISAIEDALRERQGI 355
PHK + D+ + +GA NT+ R DG K+ G NTD + LR+R
Sbjct: 69 PHKIDIIPLLDKTSENVREMGACNTLYR---DGEKICGENTD----VIGFTAPLRKRS-- 119
Query: 356 NGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRG-ARVIIFNRNYERAKALADAVSGEA 414
SP ++ VL GAGG RA G + G A + + NR ERA+AL +
Sbjct: 120 ------LSP-ETRVLVL-GAGGVSRAAIAGLRRLGLANITLTNRRKERAEALCN------ 165
Query: 415 LHFEYLHEFFPEKGMILA----NASAIGME-PNSDQSPVPKEALKAYELVFDAVYTPRNT 469
F L + E+G + A N + +GM ++P P+ A + + +D +YTP T
Sbjct: 166 -EFGLLCAPWEERGDVPADLIINTTPLGMTGAQEHETPYPR-AFQDNGIAYDLIYTPFQT 223
Query: 470 RLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPED 508
R LR+AA G VSG++MFI Q QF L+TG PE+
Sbjct: 224 RFLRDAAAAGWETVSGLDMFIGQGDAQFHLWTGHHLPEE 262
>gi|418756147|ref|ZP_13312335.1| shikimate dehydrogenase [Leptospira licerasiae serovar Varillal
str. VAR 010]
gi|384115818|gb|EIE02075.1| shikimate dehydrogenase [Leptospira licerasiae serovar Varillal
str. VAR 010]
Length = 326
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 88/293 (30%), Positives = 145/293 (49%), Gaps = 26/293 (8%)
Query: 225 KQVYQLEHINPDTKIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLVDDV-KEFFRT 283
K+ QL+ +K FG+V P+ H+ P+LH+ + + Y+ V+ + K+ T
Sbjct: 34 KKRNQLKIFRDSSKYFGIVGQPLSHTLSPLLHSSWYEDLSLDCGYLVFPVETLEKKELLT 93
Query: 284 YSGTDFAGFSVGIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAIS 343
S G SV IPHKE A D+ ++++ A NT++ +G + +NTD A+
Sbjct: 94 LSKFGVRGLSVTIPHKEIAFQLADKTDETSQTVRASNTLVFE--NGSISAHNTDGIGAVR 151
Query: 344 AIEDALRERQGINGVASHTSPIAGKIFVLVGAGGAGRALAFG----AKSRGARVIIFNR- 398
AI + S + GK+ +L+G+GG+ R ++F A + + NR
Sbjct: 152 AI------------IESFPESLKGKV-LLIGSGGSARGISFTLLKEASVKDLTIAARNRI 198
Query: 399 NYERAKALADAVSGEALHFEYLHEF---FPEKGMILANASAIGMEPNSDQSPVPKEALKA 455
E L VS + + L+E F E +I+ + + +GM+ +P+ +
Sbjct: 199 TSEELTGLLSKVSSSKIQSKDLNEVQKDFSEYSLII-HTTPLGMKGKDPGPAIPESCFRE 257
Query: 456 YELVFDAVYTPRNTRLLREAAEVGATVVSGVEMFIRQALGQFRLFTG-GLAPE 507
++VFD VY P T L+ A ++GA +V G EM + QA+ QFRLFTG L+PE
Sbjct: 258 GQVVFDIVYNPLETTLVLGAKKMGAKIVPGTEMLLYQAVEQFRLFTGVSLSPE 310
>gi|315303238|ref|ZP_07873886.1| shikimate 5-dehydrogenase [Listeria ivanovii FSL F6-596]
gi|313628395|gb|EFR96880.1| shikimate 5-dehydrogenase [Listeria ivanovii FSL F6-596]
Length = 273
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 81/282 (28%), Positives = 137/282 (48%), Gaps = 22/282 (7%)
Query: 242 LVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLV--DDVKEFFRTYSGTDFAGFSVGIPHK 299
++ NP+ HS P + N F+ + Y +L+ D + + + GF++ P K
Sbjct: 6 VIGNPIRHSLSPAMQNRIFQELGMDAEYHSVLIEEDAFETEIKKLMASGIRGFNITTPFK 65
Query: 300 EPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALRERQGINGVA 359
E + DE+ PLA GAVNT++R+ +GK G+NTD + + +E+
Sbjct: 66 ERILPFLDELEPLAVDSGAVNTVLRK--EGKWYGFNTDGKGYLEGLEE------------ 111
Query: 360 SHTSPIAGKIFVLV-GAGGAGRALAFGAKSR-GARVIIFNRNYERAKALADAVSGE-ALH 416
PI +L+ GAGGA +A+ K+ A++ I NR E+A + + A+
Sbjct: 112 --IRPITENDSILITGAGGASKAIYLALKNHTNAKITIANRTSEKAVEMTKNHNNHYAMT 169
Query: 417 FEYLHEFFPEKGMILANASAIGMEPNSDQSPVPKEALKAYELVFDAVYTPRNTRLLREAA 476
E + + +I+ S IG+E + ++SP+ LK + D +Y P T L+EA
Sbjct: 170 LEEAEKNLADFTIIIQTTS-IGLEASKNKSPISLSNLKKGTVCSDIIYNPAETAFLKEAK 228
Query: 477 EVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRKLVLEQF 518
+ GA + +G+ MF+ Q F ++TG M++ VLEQ
Sbjct: 229 KNGAIIQNGLSMFVNQGALAFEIWTGVKPRRSLMKEAVLEQL 270
>gi|414154642|ref|ZP_11410959.1| Shikimate dehydrogenase [Desulfotomaculum hydrothermale Lam5 = DSM
18033]
gi|411453473|emb|CCO08863.1| Shikimate dehydrogenase [Desulfotomaculum hydrothermale Lam5 = DSM
18033]
Length = 294
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 98/298 (32%), Positives = 141/298 (47%), Gaps = 23/298 (7%)
Query: 230 LEHINPDTKIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLV--DDVKEFFRTYSGT 287
L IN TK+ GL PV HS P +HN A+ N +YVP V + +++
Sbjct: 3 LPEINGKTKVCGLFGWPVEHSFSPAMHNAAYAGLGLNWVYVPYSVPPNCLRQAVEGMRAL 62
Query: 288 DFAGFSVGIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIED 347
AG +V +PHK+ + D+V A+ +GAVNT+ R GKLVGYNTD I +
Sbjct: 63 GLAGANVTVPHKQSIIPLLDKVDTAARIMGAVNTV--RLEQGKLVGYNTDGPGFIQFL-- 118
Query: 348 ALRERQGINGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGARVIIFNRNYERAKALA 407
++ SP ++ ++ G A A + A + I NR E+A+ LA
Sbjct: 119 ---------AAEANFSPQGKRVLLVGAGGAARAVAVALAGAGAAAIYITNRTPEKAEQLA 169
Query: 408 -DAVSGEALHFEYLHEFFPEKGMILA------NASAIGMEPNSDQSP-VPKEALKAYELV 459
D L L G ++A + +GM SDQ P P AL+ +LV
Sbjct: 170 RDVAQAGQLTTRVLPWGRQLPGTVVAEVDLVIQTTPLGMGARSDQVPEFPFTALQPGQLV 229
Query: 460 FDAVYTPRNTRLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRKLVLEQ 517
D +Y P T L+ AA GATV +G+ M + Q + F L+TG AP MR+ +L+Q
Sbjct: 230 CDLIYNPNRTLFLQMAAARGATVFNGLGMLLYQGVLAFELWTGLPAPVAIMREALLKQ 287
>gi|417907932|ref|ZP_12551699.1| shikimate dehydrogenase [Staphylococcus capitis VCU116]
gi|341595019|gb|EGS37697.1| shikimate dehydrogenase [Staphylococcus capitis VCU116]
Length = 269
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 82/284 (28%), Positives = 139/284 (48%), Gaps = 26/284 (9%)
Query: 240 FGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPM--LVDDVKEFFRTYSGTDFAGFSVGIP 297
F ++ +P+ HS PI+H+ F + N Y P+ +D+ + +GF+V IP
Sbjct: 3 FAVIGHPISHSLSPIMHSANFSNLSLNYTYEPLDIPIDEFHLLRDIITEKKLSGFNVTIP 62
Query: 298 HKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALRERQGING 357
HKE + EV +K++GAVNT++ R DGK +GYNTD ++ ++ +
Sbjct: 63 HKERIIPYLYEVDEQSKTVGAVNTVLIR--DGKWIGYNTDGIGYVTGLKQIYDD------ 114
Query: 358 VASHTSPIAGKIFVLVGAGGAGRALAFG-AKSRGARVIIFNRNYERAKALADAVSGEALH 416
+ +++GAGGA + +A K ++ I NR R + ++ +L+
Sbjct: 115 -------LKNAYILILGAGGASKGIANELTKFVEPKLTIANRTMSRFEDWNLDINAISLN 167
Query: 417 F--EYLHEFFPEKGMILANASAIGMEPNSDQSPVPKEALKAYELVFDAVYTPRNTRLLRE 474
+YL EF I+ N + GM+ N+D S + L + LV D VY P T +L E
Sbjct: 168 DAEKYLDEF-----DIVINTTPAGMDKNND-SVINLRNLSPHTLVSDIVYIPYKTPILLE 221
Query: 475 AAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRKLVLEQF 518
A G + +G++MF+ Q F+++TG M+ VL++
Sbjct: 222 AESKGNPIYNGLDMFVYQGAESFKIWTGEQPNIQIMKNTVLDKL 265
>gi|427417102|ref|ZP_18907285.1| shikimate 5-dehydrogenase [Leptolyngbya sp. PCC 7375]
gi|425759815|gb|EKV00668.1| shikimate 5-dehydrogenase [Leptolyngbya sp. PCC 7375]
Length = 291
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 85/294 (28%), Positives = 140/294 (47%), Gaps = 29/294 (9%)
Query: 237 TKIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLV--DDVKEFFRTYSGTDFAGFSV 294
T++ G++ PV HS PI+HN A + +Y+P + D +K ++ GF++
Sbjct: 12 TQLLGVIGYPVKHSMSPIMHNAAIATLGLDYVYLPFPIAPDQLKTAIDGFAAVGLKGFNI 71
Query: 295 GIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALRERQG 354
IPHK+ + EV +A++IGAVNT+ D G NTD I+ + R+
Sbjct: 72 TIPHKQTIMPWLTEVSDVAQAIGAVNTVWWS--DQGWCGTNTDAAGFIAPLRALGRDW-- 127
Query: 355 INGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGA-RVIIFNRNYERAKALADAVSGE 413
SH + ++G GGA RA+ G V++ R+ ++ A A +
Sbjct: 128 -----SHAPAL------ILGNGGAARAVVAACHQLGCPEVLVVGRSADKLAAFAQSWEMS 176
Query: 414 ALH-------FEYLHEFFPEKGMILANASAIGMEPNSDQSPVPKEA---LKAYELVFDAV 463
L ++ L E P+ G+++ NA+ IGM P + SP+ E L + + +D +
Sbjct: 177 PLQPNLSVHTWDRLDELLPKAGLVV-NATPIGMAPKIEASPLTDEQMVLLPSQAIAYDLI 235
Query: 464 YTPRNTRLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRKLVLEQ 517
Y PR TR L++A G G+EM ++Q ++T P D MR+ +LE
Sbjct: 236 YVPRPTRFLQQANAAGLGTFDGLEMLVQQGAAALEIWTQQPPPVDVMRQALLEH 289
>gi|74620637|sp|Q8J294.1|ARO1_THACU RecName: Full=Pentafunctional AROM polypeptide; Includes: RecName:
Full=3-dehydroquinate synthase; Short=DHQS; Includes:
RecName: Full=3-phosphoshikimate
1-carboxyvinyltransferase; AltName:
Full=5-enolpyruvylshikimate-3-phosphate synthase;
Short=EPSP synthase; Short=EPSPS; Includes: RecName:
Full=Shikimate kinase; Short=SK; Includes: RecName:
Full=3-dehydroquinate dehydratase;
Short=3-dehydroquinase; Includes: RecName: Full=Shikimate
dehydrogenase
gi|25005077|gb|AAN70992.1|AF482690_1 arom polypeptide [Thanatephorus cucumeris]
Length = 1618
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 139/521 (26%), Positives = 233/521 (44%), Gaps = 57/521 (10%)
Query: 34 GADLVELCID----------------SMEFSHISEVDKLIQHPTLPAIVSYRLKSSRKSS 77
GAD +EL +D S++F +++ L +LP + + R S +
Sbjct: 1115 GADAIELRVDLLNPSGDPVTGPPNIPSLDFV-ATQLSALRHTSSLPVVFTVRTASQGGAF 1173
Query: 78 DEACKNTCLQVLRRALDLDVEFVEMDYEVASDPLMSEIIYSRSNTKIIVSSY-LNGGGKP 136
+ + + AL VE+++++ SD + ++ + ++II S + +G K
Sbjct: 1174 PDTAEKEAFALYNLALRHGVEYIDVEISW-SDKKIQDLAARKGASQIIASWHDWSGNMKW 1232
Query: 137 TTEKLGDVIACMQATGADVMKLEIAVDSITD-LAPVFEMLTHCQVPLIALAVGSRGLISQ 195
+ + A + G D++K+ SI D A H P I + +G+ G +S+
Sbjct: 1233 NGAVVKEKYALAERVG-DIVKIVGKALSIEDNFALRAFAAAHTSKPFIGINMGAEGQLSR 1291
Query: 196 LLGPKFGGFLVYGSLGGKSVPGLPTLVSLKQVYQLEHINPD--TKIFGLVSNPVGHSKGP 253
+L F + + L ++ PG +S++ ++ H+N + F L +P+ HS P
Sbjct: 1292 VLNTAFTP-VSHPLLPTRAAPGQ---MSVQDIHTALHLNGQLAPQKFYLFGSPIAHSMSP 1347
Query: 254 ILHNPAFRHT----RFNGIYVPMLVDDVKEFFRTYSGTDFAGFSVGIPHKEPAVACCDEV 309
LHN F +++ + D+VK R +F G SV IP K + DEV
Sbjct: 1348 HLHNTGFEKLGLPHKYHIFETATITDEVKAVIR---APEFGGASVTIPLKLDIIPLLDEV 1404
Query: 310 HPLAKSIGAVNTII-RRPIDG--KLVGYNTDCESAISAIEDALRERQGINGVASHTSPIA 366
P AK+IGAVNTII R+ DG L G NTD AI D R + G+ + T+ +
Sbjct: 1405 SPEAKAIGAVNTIIPRKRADGSTSLFGTNTDWR----AIHDLARNNL-VVGITNETTAL- 1458
Query: 367 GKIFVLVGAGGAGRALAFGAKSRGARVI-IFNRNYERAKALADAV-SGEALHFEYLHEFF 424
++GAGG RA + + G + I +FNR A+ALAD + + + L+ F
Sbjct: 1459 -----VLGAGGTARAALYAIHALGIKTIYLFNRTRAAAQALADTFPTFGIIPLDSLNSFP 1513
Query: 425 PEKGMILAN---ASAIGMEPNSDQSPV--PKEALKAYE-LVFDAVYTPRNTRLLREAAEV 478
++ + A+ E SD + V P +A +V + Y P T +L AA+
Sbjct: 1514 KAAPTVVVSAIPATGTTTEKASDSAGVYLPPSLFEAPSGVVVEMAYKPAVTPVLGLAAKS 1573
Query: 479 GATV-VSGVEMFIRQALGQFRLFTGGLAPEDFMRKLVLEQF 518
V V GV++ Q Q+ +TG AP M+ V+ +
Sbjct: 1574 SGWVGVRGVDILCEQGFYQYEAWTGRKAPRAAMKAKVISLY 1614
>gi|312897360|ref|ZP_07756786.1| shikimate 5-dehydrogenase [Megasphaera micronuciformis F0359]
gi|310621578|gb|EFQ05112.1| shikimate 5-dehydrogenase [Megasphaera micronuciformis F0359]
Length = 292
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 85/300 (28%), Positives = 148/300 (49%), Gaps = 30/300 (10%)
Query: 231 EHINPDTKIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLVDD--VKEFFRTYSGTD 288
E + T++ GL++ P+ HS P +HN AF+ + +YV VD+ +++ +
Sbjct: 8 ERVTGHTELIGLIAYPIRHSMSPTMHNEAFKKLGLDYVYVCFEVDNSTLEDTVKGLRAMK 67
Query: 289 FAGFSVGIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDA 348
G++V +P+K P D++ P+++ +GA NT++ +G L G TD A+ ++++
Sbjct: 68 VRGWNVSMPNKGPITQYLDKLSPVSQIVGACNTVVND--NGVLTGTITDGTGAMRSLKE- 124
Query: 349 LRERQGINGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGARVI-IFNRNYE---RAK 404
+G+ V GK +VGAGGA A+ A G R I +FNR E +A+
Sbjct: 125 ----EGVEYV--------GKKMTIVGAGGAATAILVQAALDGVREIAVFNRRDEFFPKAE 172
Query: 405 ALADAVSGEALHFEYLHEFFPEKGM--------ILANASAIGMEPNSDQSPVPKEALKAY 456
+ ++ + L++ + I + ++ GM+P +P ++
Sbjct: 173 KVVAQLNEQTECKVTLYDLADHASLKRELDSSDIYIDGTSCGMKPLEGVVAIPDKSYLHK 232
Query: 457 ELV-FDAVYTPRNTRLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRKLVL 515
ELV D VY PR T L+R A EVG +G+ M + Q F+L+TG P DF+R ++
Sbjct: 233 ELVVMDTVYAPRQTELMRWADEVGCKNFNGLGMMLYQGAEAFKLWTGKDMPVDFIRDVLF 292
>gi|409043576|gb|EKM53058.1| hypothetical protein PHACADRAFT_210784 [Phanerochaete carnosa
HHB-10118-sp]
Length = 1377
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 139/529 (26%), Positives = 241/529 (45%), Gaps = 57/529 (10%)
Query: 21 EEMQASIEQAKVEGADLVELCIDSMEF-------SHISE-VDKLIQHPTLPAIVSYRLKS 72
EE+ A ++ +V DL+ +D+ F +++ E + L Q LP + + R S
Sbjct: 863 EELVAGVDAVEVR-VDLLRSPVDTESFEPYIPPTAYVCEQIAALRQKTNLPIVFTCRTVS 921
Query: 73 SRKSSDEACKNTCLQVLRRALDLDVEFVEMDYEVASDPLMSEIIYSRSNTKIIVSSYLNG 132
S + + + AL L VE++ D E+ + + R + I++SY +
Sbjct: 922 QGGSFPDTAEKQAFDLFHAALRLGVEYI--DVELTWSKKQIDALVQRKGSSQIIASYHDW 979
Query: 133 GG--KPTTEKLGDVIACMQATGADVMKLEIAVDSITDLAPVFEMLTH-----CQVPLIAL 185
G K T + DV A G D++K+ ++ D ++ + P+IA+
Sbjct: 980 SGNFKWGTAQSKDVYDRAAAFG-DIVKIVGKANNFEDNFSLYRFVEERTKADGSKPIIAI 1038
Query: 186 AVGSRGLISQLLGPKFGGFLVYGSLGGKSVPGLPTLVSLKQVYQLEHINPDTKIFGLVSN 245
+G G S++L F + + L K+ PG + V ++ L + P + F L N
Sbjct: 1039 NMGVEGQTSRILNKTFSP-VTHPLLPSKAAPGQLSFVQIQNALNLLGLLPSKRFF-LFGN 1096
Query: 246 PVGHSKGPILHNPAFRHTRFNGIYVPMLVDDVKEFFRT-YSGTDFAGFSVGIPHKEPAVA 304
P+ S P +HN A F Y + + V E + + +F G SV IP+K +
Sbjct: 1097 PISQSMSPTIHNTAHEILGFPHKYELLETETVGEEIKAAVTLPEFGGASVTIPYKLDVIP 1156
Query: 305 CCDEVHPLAKSIGAVNTIIRRPI---DGKLV--GYNTDCESAISAIEDALRERQGINGVA 359
D + P A+++GAVNTI+ PI DG V G NTD +RE +
Sbjct: 1157 LLDTLSPHAEAVGAVNTIV--PIKREDGSTVLHGENTDWV--------GMRE-----CIV 1201
Query: 360 SHTSPIAGKIF---VLVGAGGAGRALAFGAKSRGAR-VIIFNRNYERAKALADAVSGEAL 415
SH P+ G+ +++GAGG RA + KS + + +FNR A+ALA S +
Sbjct: 1202 SHL-PVTGRSIEAALVIGAGGTSRAAIYALKSLSVKNIYLFNRTRASAEALALTFSDTNV 1260
Query: 416 HFEYLHEFFPE----KGMILAN--ASAIGMEPNSDQS-PVPKEAL-KAYE-LVFDAVYTP 466
+PE ++++ ASA ++ ++ + +P L K+ + +V D Y P
Sbjct: 1261 KIVEKLGVWPEGASPPSVVISTVPASATTLDLSATNALYLPSSVLDKSVQGVVVDMAYRP 1320
Query: 467 RNTRLLREAAEVGAT-VVSGVEMFIRQALGQFRLFTGGLAPEDFMRKLV 514
T LL A++ + +V G+++ + Q QF+L+TG AP+ + ++V
Sbjct: 1321 AVTPLLELASKADSWKIVRGLDVLLEQGFAQFKLWTGREAPKSKVAEVV 1369
>gi|51893090|ref|YP_075781.1| shikimate 5-dehydrogenase [Symbiobacterium thermophilum IAM 14863]
gi|81692083|sp|Q67N06.1|AROE_SYMTH RecName: Full=Shikimate dehydrogenase
gi|51856779|dbj|BAD40937.1| shikimate 5-dehydrogenase [Symbiobacterium thermophilum IAM 14863]
Length = 294
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 91/292 (31%), Positives = 140/292 (47%), Gaps = 31/292 (10%)
Query: 238 KIFGLVSNPVGHSKGPILHNPAF----RHTRFNGIYVPMLVDDVKEFFRTYSGTDFAGFS 293
+I G++ +PV HS P +HN AF H + VP +++ G +
Sbjct: 13 RILGILGHPVAHSASPAMHNAAFAAQGMHAMYGAFDVP--PSQLEKAIAGIRALGLLGVN 70
Query: 294 VGIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALRERQ 353
V IPHKE +A D+V P A+ +GAVNTI+ R G+L+GYNTD + ++E+
Sbjct: 71 VTIPHKEAVMAYLDDVAPTARQVGAVNTIVNR--GGRLIGYNTDGWGFLLSLEERGVRVA 128
Query: 354 GINGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGARVIIFNRNYERAKALAD--AVS 411
G N V A + + +G G AR+ I NR+ +RA+ LA A +
Sbjct: 129 GRNAVVLGAGGAARAVALHLGMAGV------------ARLTIINRSRQRAEFLAADLARA 176
Query: 412 GEALHFEY-------LHEFFPEKGMILANASAIGMEPNSDQSPVPKEAL-KAYELVFDAV 463
+ E E G+++ N + +GMEP+++ +P+ L A+ +V+D V
Sbjct: 177 KTPVRAEVADPGSEEARAALAEAGLVV-NCTPLGMEPDTESTPLEDVGLLPAHCVVYDTV 235
Query: 464 YTPRNTRLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRKLVL 515
Y P TRLLREA + G V+G+ M + Q + + G P D MR L
Sbjct: 236 YRPLETRLLREARQHGLITVNGLAMLVHQGACAWEYWFGRRGPVDVMRTAAL 287
>gi|339443500|ref|YP_004709505.1| hypothetical protein CXIVA_24360 [Clostridium sp. SY8519]
gi|338902901|dbj|BAK48403.1| hypothetical protein CXIVA_24360 [Clostridium sp. SY8519]
Length = 289
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 86/295 (29%), Positives = 140/295 (47%), Gaps = 31/295 (10%)
Query: 233 INPDTKIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLV--DDVKEFFRTYSGTDFA 290
I T++ GL+ PV HS P +HN AFR + +Y+ V + + + R
Sbjct: 4 ITGKTRLTGLIGTPVAHSISPQMHNEAFRTLGLDYVYLAFDVSREHLADAVRGLKEIGIR 63
Query: 291 GFSVGIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALR 350
GF+V +PHK+ DE+ P A+ GA NT+I DG+L+G+ TD + A+ DA
Sbjct: 64 GFNVTMPHKQAVAKLADELTPAAQIAGACNTVINE--DGRLIGHTTDGIGFMDAVRDAGY 121
Query: 351 ERQGINGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRG-ARVIIFNRNYE----RAKA 405
E I GK ++G GGA A+ A G + + IF + E A+A
Sbjct: 122 E-------------ITGKRMTILGCGGASTAICAQAALDGVSSIAIFEQPAEPFASHARA 168
Query: 406 LADAVSGEALHFEYLHEFFPEKGM--------ILANASAIGMEPNSDQSPVPKEA-LKAY 456
A V +H+ + + +L NA+ +GM PN++ +P + L+
Sbjct: 169 FASRVMEHTACEVTVHDITDPEDLRSCIAASDLLTNATNVGMAPNTEGCLIPDSSFLRPG 228
Query: 457 ELVFDAVYTPRNTRLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMR 511
+V D +Y P++T+L + A G +V +G+ M + Q F+ +TG P + +R
Sbjct: 229 LIVCDIIYNPQHTKLYQMAEAAGCSVFNGMYMLLFQGAASFQCWTGRQMPVEHIR 283
>gi|238790515|ref|ZP_04634283.1| Quinate/shikimate dehydrogenase [Yersinia frederiksenii ATCC 33641]
gi|238721384|gb|EEQ13056.1| Quinate/shikimate dehydrogenase [Yersinia frederiksenii ATCC 33641]
Length = 321
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 94/292 (32%), Positives = 140/292 (47%), Gaps = 32/292 (10%)
Query: 238 KIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLVDDVKEFFRTYSGTD---FAGFSV 294
++ GL++ P+ HS P + N A Y+ VD+ F G G V
Sbjct: 8 ELIGLMAYPIRHSLSPEMQNKALEEVGLPYTYMAFEVDN-STFGHAIEGLKALKMRGTGV 66
Query: 295 GIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALRERQG 354
+P+K+ A DE+ P AK +GA+NTI+ +G L GYNTD I AI++ G
Sbjct: 67 SMPNKQLACQYVDELTPAAKLVGAINTIVND--NGFLRGYNTDGTGHIKAIKET-----G 119
Query: 355 INGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGAR-VIIFNRN---YERAKALADAV 410
+ I GK VLVGAGGA A+ A G + +++FNR YE A A A V
Sbjct: 120 FD--------IKGKKMVLVGAGGASTAIGAQAAIEGIKEIMLFNRRDEFYEEALAFAKRV 171
Query: 411 SGEALHFEYLHEFFPEKGM--------ILANASAIGMEPNSDQSPVPK-EALKAYELVFD 461
+ +++ +K IL N + +GM+P ++S V L+ LV +
Sbjct: 172 NDNTDCTVTVYDLADQKAFANAIANADILTNGTKVGMKPLENESIVSDISMLRPELLVSE 231
Query: 462 AVYTPRNTRLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRKL 513
VY P T+LL+ A E G V G M + Q QF+L+TG P +++++L
Sbjct: 232 CVYNPHMTKLLQMAMEAGCKTVDGYGMLLWQGAEQFKLWTGKEFPLEYIKRL 283
>gi|427391714|ref|ZP_18885938.1| shikimate 5-dehydrogenase [Actinobaculum massiliae ACS-171-V-Col2]
gi|425731681|gb|EKU94494.1| shikimate 5-dehydrogenase [Actinobaculum massiliae ACS-171-V-Col2]
Length = 313
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 84/268 (31%), Positives = 132/268 (49%), Gaps = 29/268 (10%)
Query: 242 LVSNPVGHSKGPILHNPAFRHTRFNGIYVP--MLVDDVKEFFRTYSGTDFAGFSVGIPHK 299
++ +P+ HS P+LH +FR NG Y+ + + R +AGF+V +P K
Sbjct: 32 VIGSPIRHSLSPLLHTTSFRALGINGTYLAHEVTAERADAAVRALRELGYAGFNVTMPCK 91
Query: 300 EPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALRERQGINGVA 359
+ +A DE+ P A+ +GAVNT+ RR +L+G+NTD A+ AI A E + +
Sbjct: 92 QAVMASLDELSPEAELMGAVNTVARR--GERLIGFNTDGAGALRAIRAAGVELDAVEDI- 148
Query: 360 SHTSPIAGKIFVLVGAGGAGRALAFGAKSRGA-RVIIFNR----NYE---RAKALADAVS 411
+++G+GGA A+ A RV +F R N+E R A+ + +
Sbjct: 149 -----------LVLGSGGASSAIYTQAAMEAVPRVSVFARPGSKNWEATRRRIAMLNERT 197
Query: 412 GEALHFEYLHE-----FFPEKGMILANASAIGMEPNSDQSPVPKEALKAYELVFDAVYTP 466
L L + ++ N + +GM P +++ + + L VFDAVY P
Sbjct: 198 SARLELHRLDDPAHLAEAVAAAQVIINGTNVGMAPREEETVLDTDLLGPQHAVFDAVYNP 257
Query: 467 RNTRLLREAAEVGATVVSGVEMFIRQAL 494
TRLLREAA GAT + G+EM + QA+
Sbjct: 258 LETRLLREAAAAGATTICGLEMLLWQAV 285
>gi|375258961|ref|YP_005018131.1| shikimate 5-dehydrogenase [Klebsiella oxytoca KCTC 1686]
gi|397655934|ref|YP_006496636.1| Shikimate/quinate 5-dehydrogenase I beta [Klebsiella oxytoca E718]
gi|365908439|gb|AEX03892.1| shikimate 5-dehydrogenase [Klebsiella oxytoca KCTC 1686]
gi|394344573|gb|AFN30694.1| Shikimate/quinate 5-dehydrogenase I beta [Klebsiella oxytoca E718]
Length = 287
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 87/300 (29%), Positives = 147/300 (49%), Gaps = 30/300 (10%)
Query: 231 EHINPDTKIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLV--DDVKEFFRTYSGTD 288
E I T++ GL++ P+ HS P +HN AF H + +Y+ V + +K+ + +
Sbjct: 3 ERITGHTELIGLIATPIRHSMSPTMHNEAFAHLGLDYVYLAFEVGNETLKDVVQGFRALK 62
Query: 289 FAGFSVGIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDA 348
G +V +P+K D++ P A+ +GAVNT++ +G L G+ TD + A+++
Sbjct: 63 LRGCNVSMPNKTEICQYLDKLSPAAELVGAVNTVVND--NGVLTGHITDGTGYMRALKE- 119
Query: 349 LRERQGINGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGARVI-IFNR------NYE 401
+GI+ I GK ++GAGGA AL A G + I IFNR N E
Sbjct: 120 ----EGID--------IIGKKMTVLGAGGAATALCVQAALDGVKAISIFNRKDKFFANAE 167
Query: 402 RAKALADAVSGEALHFEYLHEFFP-----EKGMILANASAIGMEPNSDQSPVPKEA-LKA 455
+ A + +H L + + +IL NA+ +GM+P Q +P ++ L+
Sbjct: 168 QTVAKIRNNTNCEIHLFDLDDHDKLRAEIDSSVILTNATGVGMKPFEGQMLLPDDSFLRP 227
Query: 456 YELVFDAVYTPRNTRLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRKLVL 515
+V D VY PR T LL A + G ++G+ M + Q F ++TG P + ++ ++
Sbjct: 228 DLIVSDVVYNPRKTYLLEVAEKKGCRTINGLGMMLWQGARAFEIWTGKEMPVEHIKSILF 287
>gi|449102531|ref|ZP_21739279.1| shikimate 5-dehydrogenase [Treponema denticola AL-2]
gi|448966120|gb|EMB46778.1| shikimate 5-dehydrogenase [Treponema denticola AL-2]
Length = 493
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 127/517 (24%), Positives = 217/517 (41%), Gaps = 51/517 (9%)
Query: 8 SLLVCTQLECETTEEMQASIEQAKVEGADLVELCIDSMEFSHISEVDKLIQHPTLPAIVS 67
S VC L +T E+ +++E+ K + D+ EL +D + S I + + +P I++
Sbjct: 2 STKVCLVLTEKTIEKNLSALEKYK-KFIDIAELRVDYLNQSEILYLRNFPERAGIPCILT 60
Query: 68 YRLKSS--RKSSDEACKNTCLQVLRRAL-----DLDVEFVEMDYEVASDPLMSEIIYSRS 120
R KS + E + T + R L D F +D E D E
Sbjct: 61 VRRKSDGGNFTGGEGARMT---IFARGLAFASSDPIKNFSYIDLESDFDSSGIEEAARAF 117
Query: 121 NTKIIVSSYLNGGGKPTTEKLGDVIACMQATGADVMKLEIAVDSITDLAPVFE--MLTHC 178
+ KII S + K + + I + D+ KL + + D++ +F+ L
Sbjct: 118 DIKIIRSLH----SKVPVKNIVKAIEGLSRFETDIPKLAFTANCLNDVSELFKASKLIKN 173
Query: 179 QVPLIALAVGSRGLISQLLGPKFGGFLVYGSL-----GGKSVPGLPTLVSLKQVYQLEHI 233
Q ++++ +G GL S++L K +VY K L +L+++Y I
Sbjct: 174 QEYILSV-MGPYGLSSRILSKKLNSQIVYTFTPEYIKKNKLEQALIDPETLEELYGFSKI 232
Query: 234 NPDTKIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLVDDVKEFFRTYSGTDFAGFS 293
+ +T ++G++ V S P +HN F+ N +Y+P+ KE + G S
Sbjct: 233 DEETSLYGVIGKDVNTSLSPQIHNKGFKRKNLNSVYIPISAVSSKEALDFANLLKIKGLS 292
Query: 294 VGIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALRE-- 351
V P K + + + +K IGA+NT++ + K GYNTD + A+ + L E
Sbjct: 293 VTAPFKSEIIPLINSISEASKFIGAINTLVSE--NKKWFGYNTDVDGFQQALMEFLNEKD 350
Query: 352 -RQGINGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGARVIIFNRNYERAKALADAV 410
R+ + V+ G + IFNR E+AK +A+
Sbjct: 351 LRKYKVAIIGAGGAARAVAEVISSLHG--------------KACIFNRTAEKAKNIAEKY 396
Query: 411 SGEA-----LHFEYLHEFFPEKGMILANASAIGMEPNSDQSPVPKEALKAYELVFDAVYT 465
+ ++ + LH F +I+ +A GMEP+ P+ E VF+ +Y
Sbjct: 397 KFKWALLDPINIKQLHAF---SELIIQTTNA-GMEPDIYMDPLNFYTFTGKEKVFELIYR 452
Query: 466 PRNTRLLREAAEVGATVVSGVEMFIRQALGQFRLFTG 502
P T++L+ A G V +G +M QA QF+ F G
Sbjct: 453 PETTKMLKRARTAGCQVCNGYKMLEYQAYHQFKAFAG 489
>gi|224024792|ref|ZP_03643158.1| hypothetical protein BACCOPRO_01520 [Bacteroides coprophilus DSM
18228]
gi|224018019|gb|EEF76026.1| hypothetical protein BACCOPRO_01520 [Bacteroides coprophilus DSM
18228]
Length = 249
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 80/271 (29%), Positives = 132/271 (48%), Gaps = 27/271 (9%)
Query: 238 KIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLVDDVKEFFRTYSGT-DFAGFSVGI 296
K FGL+ P+GHS N F + YV + +++F + + + AG +V I
Sbjct: 2 KKFGLIGFPLGHSFSKNFFNEKFHSENIDAEYVNFEIPTIEDFPKVLAANPNLAGLNVTI 61
Query: 297 PHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGK--LVGYNTDCESAISAIEDALRERQG 354
P+KE + DE+ A++IGAVN I GK L+GYN+D +IE L
Sbjct: 62 PYKEKVIPYLDELDKDAEAIGAVNVIKLVQTKGKRKLIGYNSDLLGFTQSIEPLLE---- 117
Query: 355 INGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGARVIIFNRNYERAKALADAVSGEA 414
P K +L G GGA +A+ G + G + +R ++ A+ V+ E
Sbjct: 118 ---------PFHKKALIL-GTGGASKAINHGLQQLGLETLFVSR----SRHDANTVTYEE 163
Query: 415 LHFEYLHEFFPEKGMILANASAIGMEPNSDQSP-VPKEALKAYELVFDAVYTPRNTRLLR 473
L E + E+ ++ N + +GM P +D+ P +P E L L++D +Y P T ++
Sbjct: 164 LTPEIMAEY-----KVIVNCTPVGMYPQADKCPEIPYECLTPQHLLYDLLYNPDTTLFMK 218
Query: 474 EAAEVGATVVSGVEMFIRQALGQFRLFTGGL 504
+ ++ GA V +G+EM + QA G + ++ L
Sbjct: 219 KGSDQGAVVKNGLEMLLLQAFGSWDIWNRQL 249
>gi|291616254|ref|YP_003518996.1| AroE [Pantoea ananatis LMG 20103]
gi|378768567|ref|YP_005197040.1| shikimate 5-dehydrogenase [Pantoea ananatis LMG 5342]
gi|386014647|ref|YP_005932924.1| shikimater dehydrogenase AroE [Pantoea ananatis AJ13355]
gi|291151284|gb|ADD75868.1| AroE [Pantoea ananatis LMG 20103]
gi|327392706|dbj|BAK10128.1| shikimater dehydrogenase AroE [Pantoea ananatis AJ13355]
gi|365188053|emb|CCF11003.1| Shikimate 5-dehydrogenase [Pantoea ananatis LMG 5342]
Length = 287
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 87/303 (28%), Positives = 146/303 (48%), Gaps = 36/303 (11%)
Query: 231 EHINPDTKIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLVD--DVKEFFRTYSGTD 288
E I T++ GL++ P+ HS P +HN AF H + +Y+ V ++++ + +
Sbjct: 3 ERITGHTELIGLIATPIRHSMSPTMHNEAFAHLGLDYVYLAFEVGTAELEKVVQGFRALK 62
Query: 289 FAGFSVGIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDA 348
G +V +P+K D++ P A+ +GAVNT++ +G L G+ TD + A+ +
Sbjct: 63 LRGCNVSMPNKTEVCRYLDKLSPAAQLVGAVNTVVND--NGVLTGHITDGTGYMRALAE- 119
Query: 349 LRERQGINGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGARVI-IFNRNYERAKALA 407
+GI+ I GK ++GAGGA A+ A G + I +FN +R K A
Sbjct: 120 ----EGID--------ILGKKMTILGAGGAATAICVQAALDGVKAISVFN---QRDKFFA 164
Query: 408 DA---VSGEALHFEYLHEFFP-----------EKGMILANASAIGMEPNSDQSPVPKEAL 453
+A V+ H + F +IL NA+ +GM+P Q +P E+
Sbjct: 165 NAQETVAKIRAHTDCEIHLFDLDDHDRLRAEINDSVILTNATGVGMKPFEGQMLLPDESF 224
Query: 454 KAYELVF-DAVYTPRNTRLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRK 512
EL+ D VY PR T LL A + G +++G+ M + Q F ++TG P D ++
Sbjct: 225 LRPELIVSDVVYIPRKTHLLETAEKKGCRIINGLGMMLWQGASAFEIWTGKPMPVDHIKN 284
Query: 513 LVL 515
++
Sbjct: 285 ILF 287
>gi|164655385|ref|XP_001728822.1| hypothetical protein MGL_3989 [Malassezia globosa CBS 7966]
gi|327507662|sp|A8QCB2.1|ARO1_MALGO RecName: Full=Pentafunctional AROM polypeptide; Includes: RecName:
Full=3-dehydroquinate synthase; Short=DHQS; Includes:
RecName: Full=3-phosphoshikimate
1-carboxyvinyltransferase; AltName:
Full=5-enolpyruvylshikimate-3-phosphate synthase;
Short=EPSP synthase; Short=EPSPS; Includes: RecName:
Full=Shikimate kinase; Short=SK; Includes: RecName:
Full=3-dehydroquinate dehydratase;
Short=3-dehydroquinase; Includes: RecName: Full=Shikimate
dehydrogenase
gi|159102708|gb|EDP41608.1| hypothetical protein MGL_3989 [Malassezia globosa CBS 7966]
Length = 1611
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 134/506 (26%), Positives = 215/506 (42%), Gaps = 65/506 (12%)
Query: 34 GADLVELCIDSMEFSHISEVDK-------LIQHPTLPAIVSYRLKSSRKSSDEACKNTCL 86
G D++EL +D + +D L Q+ +LP + + R S +
Sbjct: 1111 GVDVLELRVDLLHADGQPSIDDVREQVALLRQYTSLPILYTVRSVSQGGRLPDEANEAYF 1170
Query: 87 QVLRRALDLDVEFVEMDYEVASDPLMSEIIYSRSNTKIIVSSYLNGGG----KPTTEKL- 141
+ R L + E+V+++ SD + E+ ++ T+I+ S + G P +L
Sbjct: 1171 ALTRLGLRMGCEYVDIELTRPSDGI-EELAQAKGQTRIVASFHDTSGTMHWMAPAMRRLY 1229
Query: 142 ------GDV--IACMQATGADVMKLEIAVDSITDLAPVFEMLTHCQVPLIALAVGSRGLI 193
GD+ + T D + LE + AP PLIA+ + + G +
Sbjct: 1230 TRACVLGDIAKLVGFARTWQDSLDLESFRTRVAQEAPF---------PLIAINMQAAGQL 1280
Query: 194 SQLLGPKFGGFLVYGSLGGKSVPGLPTLVSLKQVYQLEHIN---PDTKIFGLVSNPVGHS 250
S+++ P L + VP P +S++ ++ H+ P F L +P+ HS
Sbjct: 1281 SRIVNP----LLTPVTHPALPVPAAPGQMSVRDIHHARHLLGLLPKRHFF-LFGSPITHS 1335
Query: 251 KGPILHNPAFRHTRFNGIYVPMLVDDVKEFFRTY-SGTDFAGFSVGIPHKEPAVACCDEV 309
+ P++HN AF +Y D V DF G SV IPHK + D V
Sbjct: 1336 QSPLIHNTAFELLGLPHVYARHETDSVDASVEALVRAGDFGGASVTIPHKLSIMQLLDSV 1395
Query: 310 HPLAKSIGAVNTII--RRPIDGKLV--GYNTDCESAISAIEDALRERQGINGVASHTSPI 365
P A+ IGAVNTI+ R G + G NTD AI D + + G A
Sbjct: 1396 SPHAQVIGAVNTIVPHRDETTGHMALHGENTDWR----AIVDLVAKHDGGRTRACTA--- 1448
Query: 366 AGKIFVLVGAGGAGRALAFGAKSRGA-RVIIFNRNYERAKALADAVSGEALHFEYLHEFF 424
+++GAGG+ RA + GA R++++NR +E+A LA+ V E E +
Sbjct: 1449 -----LVIGAGGSARAALYAMHKLGASRILLYNRTFEKAVNLAEQVPVE-WRVEPVDSLA 1502
Query: 425 ----PEKGMILANASAIGME--PNSDQSPVPKEALKAY-ELVFDAVYTPRNTRLLREAAE 477
+ +I++N A G P +P + L + + D Y P T LL A +
Sbjct: 1503 LAAKAKPNVIVSNVPAQGTSFTPGGADIVLPLDLLSSDGGVAIDMAYRPEITPLLTLAQQ 1562
Query: 478 VGATV-VSGVEMFIRQALGQFRLFTG 502
+ V G+E+ + QA QFRL+TG
Sbjct: 1563 HQSWHGVRGIEILLAQAFHQFRLWTG 1588
>gi|323345648|ref|ZP_08085871.1| shikimate dehydrogenase [Prevotella oralis ATCC 33269]
gi|323093762|gb|EFZ36340.1| shikimate dehydrogenase [Prevotella oralis ATCC 33269]
Length = 248
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 77/267 (28%), Positives = 132/267 (49%), Gaps = 28/267 (10%)
Query: 240 FGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLVDDVKEFFRTY-SGTDFAGFSVGIPH 298
+GL+ P+GHS N F + + Y+ + D+K+F S TD G +V IP+
Sbjct: 4 YGLIGYPLGHSFSIGYFNEKFENEGIDAKYINFEIPDIKDFPEILASNTDLKGLNVTIPY 63
Query: 299 KEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLV--GYNTDCESAISAIEDALRERQGIN 356
KE + D + P AK+IGAVN I GK+V G+N+D +IE L
Sbjct: 64 KEKVIDYLDSLSPEAKAIGAVNVIRVTHKGGKIVLKGFNSDVIGFTKSIEPILESYH--- 120
Query: 357 GVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGARVIIFNRNYERAKALADAVSGEALH 416
K +++G GGA +A+ +G KS G + +R+ + +A+ + +
Sbjct: 121 -----------KKALILGTGGASKAIDYGLKSLGLETLFASRSNK-----PNAIQYKDIT 164
Query: 417 FEYLHEFFPEKGMILANASAIGMEPNSDQSP-VPKEALKAYELVFDAVYTPRNTRLLREA 475
+ + E+ ++ N + +GM P++D P +P E + + L++D +Y P T +++
Sbjct: 165 ADTVKEY-----NVIVNCTPLGMYPHADSCPQLPYETMDNHTLLYDLIYNPDETLFMKKG 219
Query: 476 AEVGATVVSGVEMFIRQALGQFRLFTG 502
E GATV +G+EM + QA + + G
Sbjct: 220 LEHGATVKNGLEMLLLQAFASWEFWHG 246
>gi|448726421|ref|ZP_21708826.1| shikimate 5-dehydrogenase [Halococcus morrhuae DSM 1307]
gi|445795075|gb|EMA45611.1| shikimate 5-dehydrogenase [Halococcus morrhuae DSM 1307]
Length = 273
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 105/285 (36%), Positives = 136/285 (47%), Gaps = 25/285 (8%)
Query: 238 KIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLVD--DVKEFFRTYSGTDFAGFSVG 295
++FGLV +PV HS P LH A+R + YV D D+ G +V
Sbjct: 2 QVFGLVGSPVEHSLSPPLHEAAYRELGIDARYVTFEPDPTDLAAAIEGARALGIRGLNVT 61
Query: 296 IPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDG-KLVGYNTDCESAISAIEDALRERQG 354
IP K + CC E LA IGAVNT+ G +L G+NTD G
Sbjct: 62 IPFKRDVLDCC-EPDELAARIGAVNTL---DFGGERLTGHNTDA--------------IG 103
Query: 355 INGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGARVIIFNRNYERAKALADAVSGEA 414
+ +H V+VGAGGAGRA AF G V I NR ERA+ LA + G
Sbjct: 104 VKRAFAHHDVSLSGRAVVVGAGGAGRAAAFALADEGTTVAIANRTAERARELAAEIDGAT 163
Query: 415 LH-FEYLHEFFPEKGMILANASAIGMEPNSDQSPVPKEALKAYELVFDAVYTPRNTRLLR 473
H L E + +L NA+++GM + D SPV AL V DAVY+P TRLLR
Sbjct: 164 GHGLAELDELLADAD-VLVNATSVGM--DEDVSPVAPAALHGDLAVLDAVYSPIETRLLR 220
Query: 474 EAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRKLVLEQF 518
EAA GAT + G M + Q + F +TG AP + M + + E+
Sbjct: 221 EAAATGATTIDGGWMLLYQGVAAFERWTGRTAPVERMNEALRERL 265
>gi|414085080|ref|YP_006993791.1| shikimate 5-dehydrogenase [Carnobacterium maltaromaticum LMA28]
gi|412998667|emb|CCO12476.1| shikimate 5-dehydrogenase [Carnobacterium maltaromaticum LMA28]
Length = 289
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 88/303 (29%), Positives = 143/303 (47%), Gaps = 32/303 (10%)
Query: 231 EHINPDTKIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLV--DDVKEFFRTYSGTD 288
E ++ T++ GL++ P+ HS P +HN AF + Y+ V D ++ +
Sbjct: 3 ERLSGHTELIGLMATPIRHSLSPTMHNEAFAKLGLDYAYLAFEVGTDQLENGIQAIRALG 62
Query: 289 FAGFSVGIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDA 348
G ++ +P+K+ D++ P A+ +GAVNTI+ +G L G+ TD +
Sbjct: 63 MRGSNISMPNKQVVTKYLDKLSPAAEMVGAVNTIVND--NGILTGHITDGTGFM------ 114
Query: 349 LRERQGINGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGARVI-IFNR------NYE 401
G+ I G+ + GAGGA A+ A G + + IFNR N E
Sbjct: 115 -------RGLKQSDVSIIGEKMTICGAGGAATAICIQAALDGVKELSIFNRQDEFFKNAE 167
Query: 402 RAKALAD------AVSGEALHFEYLHEFFPEKGMILANASAIGMEPNSDQSPVPKEALKA 455
R AL + A + E L + E +I NA+ +GM+P D+S + +
Sbjct: 168 RTVALINEKTDCKATLYDLKDQESLRQQIAES-VIFTNATGVGMKPLQDESLITDPTMLR 226
Query: 456 YELVF-DAVYTPRNTRLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRKLV 514
ELV D VY P T+LL+ A E G V+G+ M + Q F ++TG P +++R+L+
Sbjct: 227 KELVVADVVYVPSETKLLKLAKEQGCKTVNGLGMMLWQGAAAFEMWTGQEMPVEYIRELL 286
Query: 515 LEQ 517
E+
Sbjct: 287 FEK 289
>gi|322387345|ref|ZP_08060955.1| shikimate dehydrogenase [Streptococcus infantis ATCC 700779]
gi|419842613|ref|ZP_14365950.1| shikimate dehydrogenase [Streptococcus infantis ATCC 700779]
gi|321141874|gb|EFX37369.1| shikimate dehydrogenase [Streptococcus infantis ATCC 700779]
gi|385703558|gb|EIG40671.1| shikimate dehydrogenase [Streptococcus infantis ATCC 700779]
Length = 284
Score = 120 bits (300), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 88/300 (29%), Positives = 149/300 (49%), Gaps = 33/300 (11%)
Query: 233 INPDTKIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLVD--DVKEFFRTYSGTDFA 290
I+ T++ +V+NP+ HS P +HN AF T NG+Y+ VD ++ E
Sbjct: 3 IDGYTRLAAVVANPIKHSISPFIHNSAFEATNTNGVYLAWEVDATELAETVANIRRYQMY 62
Query: 291 GFSVGIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALR 350
G ++ +P+KE +A D++ A IGAVNTI+ R +G L+GYNTD + ++
Sbjct: 63 GINLSMPYKEQVIAYLDQLSEEACLIGAVNTIVNR--EGTLIGYNTDGKGFFKSLP---- 116
Query: 351 ERQGINGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRG-ARVIIFNR--NYERAKALA 407
+ I+ K VL+GAGGA +A+ A G +++ IF R + E+ +
Sbjct: 117 -----------SFKISRKRLVLLGAGGAAKAILAQAILDGVSQISIFVRSSSMEKTRPYL 165
Query: 408 DAVSG------EALHFEYLHEFFPE--KGMILANASAIGMEPNSDQSPVPKE-ALKAYEL 458
+ + + E + + K +L NA+++GM+ +S P+P L +
Sbjct: 166 EKIQNATGFRVDLFALEDVQDLQDSITKADLLVNATSVGMDGSS--QPIPTSIVLPEKLM 223
Query: 459 VFDAVYTPRNTRLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRKLVLEQF 518
V D +Y P T L+ A E G ++G+ M + QA F L+TG P D + +L+ +++
Sbjct: 224 VADVIYQPFETPFLKWAKEQGNQSINGLGMLLYQAAEAFELWTGKEMPTDQIWELLKQKY 283
>gi|421490826|ref|ZP_15938193.1| shikimate dehydrogenase [Streptococcus anginosus SK1138]
gi|400371823|gb|EJP24772.1| shikimate dehydrogenase [Streptococcus anginosus SK1138]
Length = 284
Score = 120 bits (300), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 87/288 (30%), Positives = 141/288 (48%), Gaps = 33/288 (11%)
Query: 233 INPDTKIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLV--DDVKEFFRTYSGTDFA 290
I+ T++ +V+NP+ HS P +HN AF T NG+YV + DD+K +
Sbjct: 3 IDGYTRLAAVVANPIKHSISPFIHNAAFEQTGVNGVYVAWEISQDDLKATVENTCRYNMF 62
Query: 291 GFSVGIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALR 350
G ++ +P+K+ + DE+ P A+ IGAVNT++ + +GKL+GYNTD + ++ +
Sbjct: 63 GINLSMPYKQAVIPFLDELTPAAQMIGAVNTVVNQ--NGKLIGYNTDGKGFFMSLPSFV- 119
Query: 351 ERQGINGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGA-RVIIFNRN--YER-AKAL 406
+ GK V++GAGGA A+ A G + +F R+ +ER ++ +
Sbjct: 120 --------------VKGKKMVMLGAGGAATAIIVQAALDGVDEIFVFTRHSSFERVSQKM 165
Query: 407 ADAVSGEALHFEYL----HEFFPEK---GMILANASAIGMEPNSDQSPVPKEA-LKAYEL 458
+ A L E EK +L N +++GM+ + P+P L L
Sbjct: 166 KEIQQKTAAKIWVLPLENKELLQEKINISALLVNGTSLGMDGKA--LPIPSSIRLPHSLL 223
Query: 459 VFDAVYTPRNTRLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAP 506
V D +Y P T L+ A VV+G+ M + QA F+L+TG P
Sbjct: 224 VADVIYQPFETPFLKWAKGQEVEVVNGLGMLLYQAAEAFKLWTGKEMP 271
>gi|255525064|ref|ZP_05392009.1| shikimate 5-dehydrogenase [Clostridium carboxidivorans P7]
gi|255511217|gb|EET87512.1| shikimate 5-dehydrogenase [Clostridium carboxidivorans P7]
Length = 289
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 88/288 (30%), Positives = 141/288 (48%), Gaps = 31/288 (10%)
Query: 231 EHINPDTKIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVP--MLVDDVKEFFRTYSGTD 288
+ I+ T ++ L+ PVGHS P ++N +F+ + Y+ + ++ V + +
Sbjct: 3 KRISGTTALYSLIGTPVGHSGSPAMYNYSFQKLGVDSAYLAFDISLEKVPDAIAAMKTLN 62
Query: 289 FAGFSVGIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDA 348
G +V +P K V DE+ P A+ +GAVNTI+ +GKL G TD + ++++
Sbjct: 63 IKGSNVTMPCKSEVVKYMDELSPAARIVGAVNTIVNN--NGKLTGNITDGVGFVRSLKE- 119
Query: 349 LRERQGINGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGARVI-IFNRN---YERAK 404
NGV + GK ++GAGGA A+ GA+ I IFN Y+RA+
Sbjct: 120 -------NGV-----DVKGKNITIIGAGGAATAIQVQCALDGAKEISIFNIKDDFYKRAE 167
Query: 405 ALADAVSGEA------LHFEYLHEFFPEK---GMILANASAIGMEPNSDQSPVPKEALKA 455
+ + E L+ + EK IL NA+ +GM P+ D+SP+ A+
Sbjct: 168 ETIEKLKQEVPQCVVELYDLEDRQKLREKIASSNILVNATKVGMHPHEDESPIKDNAVFR 227
Query: 456 YELVF-DAVYTPRNTRLLREAAEVGATVVSGVEMFIRQALGQFRLFTG 502
+LV D VY P+ T+ L++A VG V G M + Q F+L+TG
Sbjct: 228 KDLVVSDTVYNPKQTKFLKDAEAVGCKTVDGTGMLLWQGAEAFKLYTG 275
>gi|409721662|ref|ZP_11269827.1| shikimate 5-dehydrogenase [Halococcus hamelinensis 100A6]
gi|448723857|ref|ZP_21706372.1| shikimate 5-dehydrogenase [Halococcus hamelinensis 100A6]
gi|445786924|gb|EMA37678.1| shikimate 5-dehydrogenase [Halococcus hamelinensis 100A6]
Length = 265
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 105/278 (37%), Positives = 137/278 (49%), Gaps = 23/278 (8%)
Query: 238 KIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLVD--DVKEFFRTYSGTDFAGFSVG 295
++FGL+ NPV HS P +H A+ + YV D D++ G +V
Sbjct: 2 QVFGLLGNPVSHSLSPPMHEAAYDELGMDARYVTFEPDESDLETAIEGARALGIEGLNVT 61
Query: 296 IPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLV-GYNTDCESAISAIEDALRERQG 354
IP K+ + CD LA IGAVNT+ G+ V G+NTD A
Sbjct: 62 IPFKQAVLDHCDP-DDLATRIGAVNTL---DFGGEEVTGHNTDAVGVTRAF--------- 108
Query: 355 INGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGARVIIFNRNYERAKALADAVSGEA 414
A H P+AG+ VLVGAGGAGRA AF G V I NR A LA+AV G +
Sbjct: 109 ----AHHDVPLAGRA-VLVGAGGAGRAAAFALADEGIEVSIANRTVGTAHDLAEAVDGAS 163
Query: 415 LHFEYLHEFFPEKGMILANASAIGMEPNSDQSPVPKEALKAYELVFDAVYTPRNTRLLRE 474
H + +L NA+++GME D+SPVP+ AL V DAVY+P TRLLR+
Sbjct: 164 GHGLDELDGLLAGADLLVNATSVGME--GDESPVPEGALHGDLAVLDAVYSPIETRLLRD 221
Query: 475 AAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRK 512
A GAT V G M + Q + F +TG AP + M +
Sbjct: 222 ARAAGATTVDGGWMLLYQGVAAFERWTGREAPIEAMNR 259
>gi|58263434|ref|XP_569127.1| aromatic amino acid family biosynthesis-related protein [Cryptococcus
neoformans var. neoformans JEC21]
gi|134108382|ref|XP_777142.1| hypothetical protein CNBB3730 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|338817572|sp|P0CM23.1|ARO1_CRYNB RecName: Full=Pentafunctional AROM polypeptide; Includes: RecName:
Full=3-dehydroquinate synthase; Short=DHQS; Includes:
RecName: Full=3-phosphoshikimate
1-carboxyvinyltransferase; AltName:
Full=5-enolpyruvylshikimate-3-phosphate synthase;
Short=EPSP synthase; Short=EPSPS; Includes: RecName:
Full=Shikimate kinase; Short=SK; Includes: RecName:
Full=3-dehydroquinate dehydratase;
Short=3-dehydroquinase; Includes: RecName: Full=Shikimate
dehydrogenase
gi|338817573|sp|P0CM22.1|ARO1_CRYNJ RecName: Full=Pentafunctional AROM polypeptide; Includes: RecName:
Full=3-dehydroquinate synthase; Short=DHQS; Includes:
RecName: Full=3-phosphoshikimate
1-carboxyvinyltransferase; AltName:
Full=5-enolpyruvylshikimate-3-phosphate synthase;
Short=EPSP synthase; Short=EPSPS; Includes: RecName:
Full=Shikimate kinase; Short=SK; Includes: RecName:
Full=3-dehydroquinate dehydratase;
Short=3-dehydroquinase; Includes: RecName: Full=Shikimate
dehydrogenase
gi|50259827|gb|EAL22495.1| hypothetical protein CNBB3730 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|57223777|gb|AAW41820.1| aromatic amino acid family biosynthesis-related protein, putative
[Cryptococcus neoformans var. neoformans JEC21]
Length = 1611
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 152/525 (28%), Positives = 224/525 (42%), Gaps = 65/525 (12%)
Query: 33 EGADLVELCIDSMEFSH----------ISEVDKLIQH----PTLPAIVSYRLKSS--RKS 76
EGAD VE +D + + IS V K + TLP + S R K
Sbjct: 1111 EGADAVEFRVDLLSTTGQAPTRPALPPISFVAKQLASLRLATTLPIVFSVRSKDQGGMVP 1170
Query: 77 SDEACKNTCLQVLRRALDLDVEFVEMDYEVASDPLMSEIIYSRSNTKIIVSSYLNGGGKP 136
SD A L +R L E+V+++ + L+ I+ + T II S + G
Sbjct: 1171 SDNAEAYGAL--VRLGLRCACEYVDLEV-CWPEQLLDSIVQLKRETHIIASWHDWTGDMA 1227
Query: 137 T-----------TEKLGDV--IACMQATGADVMKLEIAVDSITDLAPVFEMLTHCQV-PL 182
EK GDV I +G D KL I V E+ +H PL
Sbjct: 1228 WDGEEMKAKHVLCEKYGDVAKIVGTAKSGLDNAKLAIFVG---------EVQSHPGAKPL 1278
Query: 183 IALAVGSRGLISQLLGPKFGGFLVYGSLGGKSVPGLPTLVSLKQVYQLEHINPDTKIFGL 242
+A+ +G+ G +S++L P + + +L ++ PG T + Q L P K F L
Sbjct: 1279 LAINMGAAGQLSRILNPILTP-VTHDALPSRAAPGQLTAREILQARALTGSLPAKK-FVL 1336
Query: 243 VSNPVGHSKGPILHNPAFRHTRFNGIYVPMLVDDVKE-FFRTYSGTDFAGFSVGIPHKEP 301
+P+ HS P+LHN F Y + V + DF G SV IP K
Sbjct: 1337 FGSPIAHSVSPLLHNAGFATLGLPHTYRLHESEKVDQGVLEVIRSPDFGGASVTIPLKLD 1396
Query: 302 AVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALRERQGINGVASH 361
+ D V AK IGAVNT+I P GKL G NTD + AI A + + ++
Sbjct: 1397 IIPHLDSVSEDAKIIGAVNTVI--PRGGKLHGENTDWQ----AIHQAAAQNLDADALSYG 1450
Query: 362 TSPIAGKIFVLVGAGGAGRALAFGA-KSRGARVIIFNRNYERAKALADAVSGEALHFEYL 420
+S +++GAGG RA + K R + +FNR E A A A E+ + +
Sbjct: 1451 SS-----TALVIGAGGTCRAAIYAMHKLRFKTIYLFNRTPENA-AKVKASFPESYNIAVV 1504
Query: 421 HEF--FPEKGMILAN---ASAIGMEPNSDQSPVPKEAL-KAYELVFDAVYTPRNTRLLRE 474
PE +++ + +++ ++ S +P E L + + D Y P T LL
Sbjct: 1505 TSLSSLPEAPVVVVSTVPGNSLTLDTFSQGIYLPSEVLSRPKGVAIDLAYKPHMTALLHA 1564
Query: 475 AAEV-GATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRKLVLEQF 518
A + G VV GVE+ Q QF +TG AP+ MRK VL+++
Sbjct: 1565 AEKKEGWKVVPGVEILCLQGFKQFEEWTGKRAPQKKMRKAVLDKY 1609
>gi|333371747|ref|ZP_08463689.1| shikimate dehydrogenase [Desmospora sp. 8437]
gi|332975676|gb|EGK12562.1| shikimate dehydrogenase [Desmospora sp. 8437]
Length = 283
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 105/295 (35%), Positives = 150/295 (50%), Gaps = 37/295 (12%)
Query: 237 TKIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLVDDVKEFFRTYSGTD---FAGFS 293
T+ GL+ +PV HSK P + N AFR +Y+ V +E R +G F G++
Sbjct: 7 TEKTGLIGHPVAHSKSPEMMNEAFRREGLPWVYLAFDVAS-EELGRAVAGLKSLGFRGWN 65
Query: 294 VGIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALRERQ 353
V IPHK + DEV A+ IGAVNT+I R +G+L+G NTD +E +RE
Sbjct: 66 VTIPHKVAVMEHLDEVEESAREIGAVNTVIHR--NGRLIGTNTD---GAGYLESLVRE-T 119
Query: 354 GINGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGARVI-IFNRNYERAKALADAVS- 411
G + + G+ V++GAGGA RA+ + GA I I NR ++A+ LAD +
Sbjct: 120 GFD--------VKGRRVVILGAGGAARAVGYTLARAGAEQIGIVNRTEKKAQDLADHLRR 171
Query: 412 ---------GEALHFEYLHEFFPEKGMILANASAIGMEPNSDQSPVPKEALKAYELVFDA 462
GEA + + +L +++GM P+ + PV +L LV D
Sbjct: 172 WTRADGISPGEA-------DTAIREADLLVQTTSVGMHPHPEGCPVDPASLHKDLLVSDL 224
Query: 463 VYTPRNTRLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRKLVLEQ 517
+Y PR TRLL+EA GA V SG+ M + Q F +TG AP + M + VLEQ
Sbjct: 225 IYHPRQTRLLQEAKTRGARVHSGLGMLLHQGALAFERWTGRQAPVERMGE-VLEQ 278
>gi|422342123|ref|ZP_16423063.1| hypothetical protein HMPREF9353_01729 [Treponema denticola F0402]
gi|325474191|gb|EGC77379.1| hypothetical protein HMPREF9353_01729 [Treponema denticola F0402]
Length = 771
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 129/517 (24%), Positives = 217/517 (41%), Gaps = 51/517 (9%)
Query: 8 SLLVCTQLECETTEEMQASIEQAKVEGADLVELCIDSMEFSHISEVDKLIQHPTLPAIVS 67
S VC L +T E+ +++E+ K + D+ EL +D + S I + + +P I++
Sbjct: 280 STKVCLVLTEKTIEKNLSALEKYK-KFIDIAELRVDYLNQSEILYLRNFPERAGIPCILT 338
Query: 68 YRLKSS--RKSSDEACKNTCLQVLRRAL-----DLDVEFVEMDYEVASDPLMSEIIYSRS 120
R KS + E + T + R L D F +D E D E
Sbjct: 339 VRRKSDGGNFTGGEGARMT---IFARGLAFANADPIKNFSYIDLESDFDSSGIEEAARAF 395
Query: 121 NTKIIVSSYLNGGGKPTTEKLGDVIACMQATGADVMKLEIAVDSITDLAPVFE--MLTHC 178
+ KII S + K + + I + D+ KL + + D++ +F+ L
Sbjct: 396 DIKIIRSLH----SKVPVKNIVKTIEGLSRFETDIPKLAFTANCLNDVSELFKASKLIKN 451
Query: 179 QVPLIALAVGSRGLISQLLGPKFGGFLVYGSL-----GGKSVPGLPTLVSLKQVYQLEHI 233
Q ++++ +G GL S++L K +VY K L +L+++Y I
Sbjct: 452 QEYILSV-MGPYGLSSRILSKKLNSQIVYTFTPEYIKKNKLEQALIDPETLEELYGFSKI 510
Query: 234 NPDTKIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLVDDVKEFFRTYSGTDFAGFS 293
+ +T ++G++ V S P +HN F+ N +Y+P+ KE + G S
Sbjct: 511 DEETSLYGVIGKDVNTSLSPQIHNKGFKRKNLNSVYIPISAVSSKEALDFANLLKIKGLS 570
Query: 294 VGIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALRE-- 351
V P K + + + +K IGAVNT+I + K GYNTD + A+ + L E
Sbjct: 571 VTAPFKSEIIPLINSISEASKFIGAVNTLITE--NKKWFGYNTDVDGFQQALMEFLNEKD 628
Query: 352 -RQGINGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGARVIIFNRNYERAKALADAV 410
R+ + V+ G + IFNR E+AK +A+
Sbjct: 629 LRKYKVAIIGAGGAARAVAEVISSLHG--------------KACIFNRTAEKAKNIAEKY 674
Query: 411 SG-----EALHFEYLHEFFPEKGMILANASAIGMEPNSDQSPVPKEALKAYELVFDAVYT 465
+ ++ + LH F +I+ +A GMEP+ P+ E VF+ +Y
Sbjct: 675 KFKWALLDPINIKQLHAF---SELIIQTTNA-GMEPDIYMDPLNFYTFTGKEKVFELIYR 730
Query: 466 PRNTRLLREAAEVGATVVSGVEMFIRQALGQFRLFTG 502
P T++L+ A G V +G +M QA QF+ F G
Sbjct: 731 PETTKMLKRARTAGCQVCNGYKMLEYQAYHQFKAFAG 767
>gi|284172755|ref|YP_003406137.1| shikimate 5-dehydrogenase [Haloterrigena turkmenica DSM 5511]
gi|284017515|gb|ADB63464.1| shikimate 5-dehydrogenase [Haloterrigena turkmenica DSM 5511]
Length = 266
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 97/280 (34%), Positives = 138/280 (49%), Gaps = 22/280 (7%)
Query: 238 KIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLVD--DVKEFFRTYSGTDFAGFSVG 295
++G++ NPV HS P +H AFR + YV D ++E FR G +V
Sbjct: 2 DVYGIIGNPVEHSLSPPMHEAAFRERGIDAKYVTFEADPDRIEEAFRGAEALGVDGLTVT 61
Query: 296 IPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALRERQGI 355
+P K A + + + +GAVNTI + VGYNTD + A E
Sbjct: 62 LPFKHDAFEFAEPDEQIQR-VGAVNTIDF--TENGPVGYNTDMTGTLRAFE--------- 109
Query: 356 NGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGARVIIFNRNYERAKALADAVSGEAL 415
H + V+VGAGGA RALAFG + GA V I NR +A LAD V G
Sbjct: 110 ----HHGVDLEDTRAVVVGAGGAARALAFGFEDAGADVQIANRTASKAHDLADEVPGATG 165
Query: 416 H-FEYLHEFFPEKGMILANASAIGMEPNSDQSPVPKEALKAYELVFDAVYTPRNTRLLRE 474
H E L + + ++ANA+++G+E SD+S P +A + FDAVY P TR L++
Sbjct: 166 HGLEALPDLMADAD-VVANATSVGLE--SDESVAPADAWHGDLVAFDAVYKPLETRFLKD 222
Query: 475 AAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRKLV 514
AA GA + G M + Q + F +TG AP + M +++
Sbjct: 223 AAATGAQTIDGAWMLLFQGVDAFETWTGEDAPVETMNEVL 262
>gi|380473533|emb|CCF46240.1| pentafunctional AROM polypeptide [Colletotrichum higginsianum]
Length = 1581
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 143/518 (27%), Positives = 229/518 (44%), Gaps = 80/518 (15%)
Query: 30 AKVEGADLVELCIDSM----EFSHISEVDKLIQHPTLPAIVSYRLKSSRKSSDEACKNTC 85
A V GAD VEL +D + E S +V L +P I + R K+ + +
Sbjct: 1072 AVVVGADAVELRVDLLQDYSEDSVAHQVALLRSVADVPIIFTLRTKAQGGKFPDDAYDQG 1131
Query: 86 LQVLRRALDLDVEFVEMDYEVASDPLMSEIIYSRSNTKIIVS--------SYLNGGGKPT 137
L + R+A+ + VEF++++ + + ++ ++ ++ +II S S+ NG P
Sbjct: 1132 LGLYRKAIRMGVEFIDVEMTLP-ERVIQTVVENKGPCRIIASHHDPTGNLSWKNGSWIPF 1190
Query: 138 TEK---LGDVIACMQATGADVMKLEIAVDSITDLAPV-FEMLTHCQVPLIALAVGSRGLI 193
K GDVI ++ + ++ DLA EML+ + P+IAL +G+ G +
Sbjct: 1191 YNKALQWGDVI--------KLVGVAQRIEDNYDLAHFKSEMLSSHKTPIIALNMGTAGKL 1242
Query: 194 SQLLGPKFGGFLV---YGSLGGKSVPGLPTLVSLKQVYQL-EHINPDTKIFGLVSNPVGH 249
S++L G L + +L K+ PG + ++Q L I+P + F L P+
Sbjct: 1243 SRVLN----GCLTPVSHPALPFKAAPGQLSAAEIRQALALLGGIDPLS--FYLFGKPISA 1296
Query: 250 SKGPILHNPAFRHTRFNGIYVPMLVD---DVKEFFRTYSGTDFAGFSVGIPHKEPAVACC 306
S+ P LHN F Y D DV+E R DF G SV IP K +
Sbjct: 1297 SRSPALHNTLFALAGLPHEYFRKETDNAADVREIIR---APDFGGASVTIPLKLDIMKEI 1353
Query: 307 DEVHPLAKSIGAVNTIIRRPIDG----KLVGYNTDCESAISAIEDALRERQGINGVASHT 362
DE+ A+ IGAVNTI+ G KLVG NTD + +++ A GVAS +
Sbjct: 1354 DEISEAARVIGAVNTIVPTRASGSSDTKLVGDNTDWSGMVHSLQSA--------GVASRS 1405
Query: 363 SPIAGKIFVLVGAGGAGRALAFGAKSRGARVIIFNRNYERAKALADAVSGEALHFEYLHE 422
S +++G+GG RA F ++ G F Y A+ ++ + E L + +
Sbjct: 1406 STGGQCSAMVIGSGGTTRAAIFALRALG-----FGPIYALAR---NSGNLETLKASFPPD 1457
Query: 423 FFPEKGMILANASAIGMEPNSDQSPVP---------KEALKAY----------ELVFDAV 463
F E + ASA+ P S +P +E L A ++ +
Sbjct: 1458 FGIEALKSASEASALSTSPTVIVSTIPADKPVDASLRETLVAVLRHGTATDEKRVLLEMA 1517
Query: 464 YTPRNTRLLREAAEVGATVVSGVEMFIRQALGQFRLFT 501
Y PR+T L++ A E G + G+E+ Q QF+ +T
Sbjct: 1518 YQPRHTPLMQLAEEAGWETIPGLEVLSAQGWHQFQKWT 1555
>gi|210615766|ref|ZP_03290747.1| hypothetical protein CLONEX_02965 [Clostridium nexile DSM 1787]
gi|210150102|gb|EEA81111.1| hypothetical protein CLONEX_02965 [Clostridium nexile DSM 1787]
Length = 292
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 89/291 (30%), Positives = 139/291 (47%), Gaps = 30/291 (10%)
Query: 231 EHINPDTKIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLV--DDVKEFFRTYSGTD 288
I T++ GL+ +PV HS P++HN AF+ + Y+ V D +K +
Sbjct: 6 NQITGHTRLTGLLGSPVEHSISPMMHNEAFQQLGLDYAYLAFDVGTDKLKTAVEGLRTLN 65
Query: 289 FAGFSVGIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDA 348
GF++ +P K + CD++ P A+ IGAVNT++ +G L+GY TD + A++DA
Sbjct: 66 VRGFNLTMPDKNLMCSLCDKLSPAAEIIGAVNTVVND--NGVLIGYTTDGVGYMHAVKDA 123
Query: 349 LRERQGINGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRG-ARVIIFNRN---YERA- 403
G N I GK L+GAGGA A+ A G + + +FN + RA
Sbjct: 124 -----GHN--------IIGKKMTLLGAGGAATAILVQAALDGVSEISVFNVRDDFFARAE 170
Query: 404 KALADAVSGEALHFEYLHEFFPE-------KGMILANASAIGMEPNSDQSPVPKEALKAY 456
K +AD P+ + IL N +++GM P++D + ++
Sbjct: 171 KTVADLNERTNCKVRLFDFENPDILKREISESAILTNGTSVGMSPDTDACIIKDTSVFHK 230
Query: 457 ELVF-DAVYTPRNTRLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAP 506
+L+ D +Y P T+LLR A E G +G+ M + Q FRL+TG P
Sbjct: 231 DLIVSDVIYNPEETKLLRLAKEAGCPTFNGLYMLLYQGAEAFRLWTGKEMP 281
>gi|418412007|ref|ZP_12985273.1| shikimate dehydrogenase [Staphylococcus epidermidis BVS058A4]
gi|410891590|gb|EKS39387.1| shikimate dehydrogenase [Staphylococcus epidermidis BVS058A4]
Length = 269
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 85/285 (29%), Positives = 142/285 (49%), Gaps = 28/285 (9%)
Query: 240 FGLVSNPVGHSKGPILHNPAFRHTRFNGIY--VPMLVDDVKEFFRTYSGTDFAGFSVGIP 297
F ++ NP+ HS P++H+ FR Y + + V+ ++ + S GF+V IP
Sbjct: 3 FAVIGNPISHSLSPLMHHANFRSLNLENTYEAINVPVNQFQDIKKIISEKSIDGFNVTIP 62
Query: 298 HKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALRERQGING 357
HKE + D+++ AKS+GAVNT++ + DGK +GYNTD +NG
Sbjct: 63 HKERIIPYLDDINEQAKSVGAVNTVLVK--DGKWIGYNTDGIGY-------------VNG 107
Query: 358 VASHTSPIAGKIFVLVGAGGAGRALAFG-AKSRGARVIIFNRNYERAKALADAVSGEAL- 415
+ I +++GAGGA + +A K + + NR R + ++ L
Sbjct: 108 LKQIYESIEDAYILILGAGGASKGIANELYKIVRPTLTVANRTMSRFNNWSLNINKINLS 167
Query: 416 HFE-YLHEFFPEKGMILANASAIGMEPNSDQSPVPKEALKAYELVFDAVYTPRNTRLLRE 474
H E +L EF I+ N + GM N+D S + L ++ LV D VY P T +L E
Sbjct: 168 HAERHLDEF-----DIIINTTPAGMNGNTD-SVISLNRLASHTLVSDIVYNPYKTPILIE 221
Query: 475 AAEVGATVVSGVEMFIRQALGQFRLFTGGLAPE-DFMRKLVLEQF 518
A + G + +G++MF+ Q F+++T L P+ + M+ +V+ +
Sbjct: 222 AEQRGNPIYNGLDMFVHQGAESFKIWT-NLEPDIEAMKNVVIHKL 265
>gi|154151105|ref|YP_001404723.1| shikimate 5-dehydrogenase [Methanoregula boonei 6A8]
gi|153999657|gb|ABS56080.1| shikimate 5-dehydrogenase [Methanoregula boonei 6A8]
Length = 462
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 93/281 (33%), Positives = 137/281 (48%), Gaps = 23/281 (8%)
Query: 234 NPDTKIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLVDDVKEFFRTYSGTDFAGFS 293
+P T+ G+ P GHSK P+L N F H R N Y ++ G S
Sbjct: 204 DPQTRFLGVAGWPCGHSKSPVLFNRLFEHYRLNCHYTRFEAPEIGPVMEMARLISAKGLS 263
Query: 294 VGIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALRERQ 353
V IP K+ ++ DE+ A+ IGAVNT++ G+ G+NTD
Sbjct: 264 VTIPFKQDVMSYLDEIDEAAQKIGAVNTVVF--ACGRAYGWNTDW--------------I 307
Query: 354 GINGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGARVIIFNRNYERAKALADAVSGE 413
GI +H ++G VL+GAGG A A+ + +II NR E+A+ALA+
Sbjct: 308 GIRKPLAH---LSGSRAVLLGAGGVAAAAAYALRDLDMEIIILNRTPEKARALAERT--- 361
Query: 414 ALHFEYLHEFFPEKGMILANASAIGMEPNSDQSPVPKEALKAYELVFDAVYTPRNTRLLR 473
F +F ++ NA++IGM+P++ SP+ + LK V D VYTP T L+
Sbjct: 362 GCRFGAWDDFDRTNPDLVVNATSIGMQPDTG-SPLRDDQLKKEMTVCDLVYTPPVTSLIA 420
Query: 474 EAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRKLV 514
A + G T + G E F+ QA QFRLF G P+ +R+++
Sbjct: 421 AARKAGCTTILGTETFVYQAQEQFRLFFGIDVPDTTIREIL 461
>gi|374814900|ref|ZP_09718637.1| putative 3-dehydroquinate dehydratase, type 1/shikimate
5-dehydrogenase [Treponema primitia ZAS-1]
Length = 503
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 107/416 (25%), Positives = 175/416 (42%), Gaps = 50/416 (12%)
Query: 118 SRSNTKIIVSSYLN--GGGKPTTEKLGDVIACMQATGADVMKLEIAVDSITDLAPVFEML 175
+R+ I+ SY N G G+ +L + M G ++ K + S D+ V++
Sbjct: 113 ARTFGTRIIRSYHNMQGIGEDPAARLRN----MLHVGDEIAKAAVMPQSFEDVRRVYQAA 168
Query: 176 THCQ-VPLIALAVGSRGLISQLLGPKFGGFLVYGSLGGKS--VPGLPTLVS---LKQVYQ 229
+ I L +G G+ +++L G +L Y + G+ PG P +S L ++Y+
Sbjct: 169 RETAGMEKILLCMGHLGISTRILAEYMGCYLSYTTAMGEKDFPPGAPGQLSPRDLVELYR 228
Query: 230 LEHINPDTKIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLVDDVKEFFRTYSGTDF 289
++ P TK+FG++ P+ + P N F + + +YVP D V+ F + +
Sbjct: 229 FRNVTPKTKLFGILGYPLNVTSSPEFFNTVFSSEKIDAVYVPFPSDSVEAFMQLAGEINL 288
Query: 290 AGFSVGIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCES------AIS 343
AG SV IP+KE + +S+GA NT+I P G NTD A +
Sbjct: 289 AGASVTIPYKEKVLPYLGHKTAEVESLGACNTLICGP--QGWSGANTDTHGFSDSLLAFT 346
Query: 344 AIEDALRERQGINGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGARVIIFNRNYERA 403
+D R R I G A ++F L G + ++ NR A
Sbjct: 347 GKKDFKRMRITIIGSGGAARAAAAEVFRLKG-----------------KALVLNRTLVHA 389
Query: 404 KALA-------DAVSGEALHFEYLHEFFPEKGMILANASAIGMEPNSDQSPVPKEALKAY 456
+ LA + G E I+ +++GM+P+ + P+
Sbjct: 390 RELAALYRFAWGGLDGRG------AELMSGYNDIIIQTTSVGMDPDLEGDPLELYFFNGT 443
Query: 457 ELVFDAVYTPRNTRLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRK 512
E+V D +Y P TR L AA G V++G +M IRQA Q+ F G P + +
Sbjct: 444 EVVMDLIYKPERTRFLTRAAAAGCKVLNGHDMLIRQAKYQYSCFFGKEYPSKLVSR 499
>gi|327507649|sp|C5G8R4.1|ARO1_AJEDR RecName: Full=Pentafunctional AROM polypeptide; Includes: RecName:
Full=3-dehydroquinate synthase; Short=DHQS; Includes:
RecName: Full=3-phosphoshikimate
1-carboxyvinyltransferase; AltName:
Full=5-enolpyruvylshikimate-3-phosphate synthase;
Short=EPSP synthase; Short=EPSPS; Includes: RecName:
Full=Shikimate kinase; Short=SK; Includes: RecName:
Full=3-dehydroquinate dehydratase;
Short=3-dehydroquinase; Includes: RecName: Full=Shikimate
dehydrogenase
gi|239607236|gb|EEQ84223.1| 3-dehydroquinate synthase [Ajellomyces dermatitidis ER-3]
Length = 1597
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 136/524 (25%), Positives = 232/524 (44%), Gaps = 83/524 (15%)
Query: 34 GADLVELCIDSMEF----SHISEVDKLIQH-------PTLPAIVSYRLKSSRKSSDEACK 82
G+D VEL +D ++ S I VD + + ++P + + R K+ +
Sbjct: 1076 GSDAVELRVDLLKDPQSDSEIPSVDYVAEQISVLRSRTSVPLVFTIRTKAQGGRFPDDAY 1135
Query: 83 NTCLQVLRRALDLDVEFVEMDYEVASDPLMSEIIYSRSNTKIIVS--------SYLNGGG 134
+ LQ+ R A+ + EFV+++ + L+ + + +KII S S+ NG
Sbjct: 1136 DAALQLYRLAIRMGSEFVDLEISFP-EQLLRTVTEMKGFSKIIASHHDPKGELSWANGSW 1194
Query: 135 KPTTEKLGDVIACMQATGADVMKLEIAVDSITDLAPVFEMLTHCQ----VPLIALAVGSR 190
K +Q DV+KL S+ D A + + T + VP+IA+ +G +
Sbjct: 1195 IQFYNK------ALQY--GDVIKLVGVARSLDDNASLKKFKTWAEEKHDVPIIAINMGDK 1246
Query: 191 GLISQLLGPKFGGFLV---YGSLGGKSVPGLPTLVSLKQVYQLEHINPDTKIFGLVSNPV 247
G +S++L GF+ + SL K+ PG + +++ L +K F ++ NPV
Sbjct: 1247 GQLSRMLN----GFMTPVSHPSLPFKAAPGQLSAREIRKGLSLIG-EIKSKKFAVIGNPV 1301
Query: 248 GHSKGPILHNPAFRHTRFNGIYVPMLVDD---VKEFFRTYSGTDFAGFSVGIPHKEPAVA 304
S+ P +HN FR IY + +D VK+F R+ DF G S+ IP K +
Sbjct: 1302 SASRSPAMHNALFRQMGLPHIYGTLETEDPEIVKKFIRS---PDFGGASITIPLKLDIMP 1358
Query: 305 CCDEVHPLAKSIGAVNTIIRRP-------IDGKLVGYNTDCESAISAIEDALRERQGING 357
DE+ P A SIGAVNTI+ P +L+G NTD + + + DA G
Sbjct: 1359 LLDEIAPEAVSIGAVNTIVCAPPAPDDQSQAPRLIGRNTDWQGMVRCLSDA-----GAYP 1413
Query: 358 VASHTSPIAGKIFVLVGAGGAGRALAFGAKSRG-ARVIIFNRNYER-------------A 403
A+ T+ AG +++G GG RA F +S G + + + R+ ++
Sbjct: 1414 AATPTTTSAG---LVIGGGGTARAAIFALQSMGYSPIYVVGRSPDKLSSMTSTFAPDHDI 1470
Query: 404 KALADAVSGEALHFEYLHEFFPEKGM------ILANASAIGMEPNSDQSPVPKEALKAYE 457
+ L D + E+L + +K + IL + + NSD +
Sbjct: 1471 RILEDVKALESLPTVAIGTIPGDKPIEPHMREILCELFDLCEKANSDAEQA--RGISTKR 1528
Query: 458 LVFDAVYTPRNTRLLREAAEVGATVVSGVEMFIRQALGQFRLFT 501
++ + Y P T L++ A++ G TV+ G+E + Q + Q +T
Sbjct: 1529 ILLEMAYKPSVTSLMQLASDSGWTVLPGLEALVAQGVYQCEYWT 1572
>gi|335029401|ref|ZP_08522908.1| shikimate dehydrogenase [Streptococcus infantis SK1076]
gi|334268698|gb|EGL87130.1| shikimate dehydrogenase [Streptococcus infantis SK1076]
Length = 284
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 93/309 (30%), Positives = 148/309 (47%), Gaps = 51/309 (16%)
Query: 233 INPDTKIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLVD--DVKEFFRTYSGTDFA 290
I+ T++ +V+NP+ HS P +HN AF T NG+Y+ V+ D+ E
Sbjct: 3 IDGYTRLAAVVANPIKHSISPFIHNRAFEATNTNGVYLAWEVEGTDLAETVANIRRYQMF 62
Query: 291 GFSVGIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALR 350
G ++ +P+KE + D++ A+ IGAVNT++ R +G L+GYNTD + ++
Sbjct: 63 GINLSMPYKEQVIPYLDQLSEEARLIGAVNTVVNR--EGTLIGYNTDGKGFFKSLP---- 116
Query: 351 ERQGINGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRG-ARVIIFNRNYERAK----- 404
+ I+GK VL+GAGGA +A+ A G ++V +F R+ K
Sbjct: 117 -----------SFKISGKRMVLLGAGGAAKAILVQAILDGVSQVSVFVRSASMGKTQPYL 165
Query: 405 --------------ALADAVSGEALHFEYLHEFFPEKGMILANASAIGMEPNSDQSPVPK 450
AL DA + L E K +L NA+++GM+ S P+P
Sbjct: 166 EKLQHETGFRVDLFALEDA--------QELQENI-RKAELLVNATSVGMDGASQ--PIPT 214
Query: 451 E-ALKAYELVFDAVYTPRNTRLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDF 509
L LV D +Y P T L+ A G V+G+ M + QA F+L+TG P D
Sbjct: 215 SIVLPEKLLVADVIYQPFETPFLKWARSQGNHAVNGLGMLLYQAAEAFQLWTGKEMPTDQ 274
Query: 510 MRKLVLEQF 518
+ +L+ +++
Sbjct: 275 IWELLKQKY 283
>gi|191637359|ref|YP_001986525.1| shikimate 5-dehydrogenase [Lactobacillus casei BL23]
gi|301065624|ref|YP_003787647.1| shikimate 5-dehydrogenase [Lactobacillus casei str. Zhang]
gi|385819073|ref|YP_005855460.1| shikimate dehydrogenase [Lactobacillus casei LC2W]
gi|385822238|ref|YP_005858580.1| shikimate dehydrogenase [Lactobacillus casei BD-II]
gi|190711661|emb|CAQ65667.1| Shikimate 5-dehydrogenase [Lactobacillus casei BL23]
gi|300438031|gb|ADK17797.1| Shikimate 5-dehydrogenase [Lactobacillus casei str. Zhang]
gi|327381400|gb|AEA52876.1| Shikimate dehydrogenase [Lactobacillus casei LC2W]
gi|327384565|gb|AEA56039.1| Shikimate dehydrogenase [Lactobacillus casei BD-II]
Length = 296
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 92/289 (31%), Positives = 137/289 (47%), Gaps = 30/289 (10%)
Query: 233 INPDTKIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLV--DDVKEFFRTYSGTDFA 290
I+ T + L+ +PVGHS P ++N +F+ + + YV V + + E
Sbjct: 5 ISGTTGLLCLLGSPVGHSGSPAMYNFSFQKQKIDAAYVAFDVTKEQMPEALNAMRLFKMR 64
Query: 291 GFSVGIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALR 350
G +V +P K A DE+ P AK IGAVN ++ DGKL+G+ TD + +++
Sbjct: 65 GGNVTMPCKNVAATLMDELSPAAKIIGAVNVVVND--DGKLIGHITDGIGFVRNLQE--- 119
Query: 351 ERQGINGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGARVI-IFNRN---YERAKAL 406
H I GK V++GAGGA A+ A GA+ I IFNR Y RA++
Sbjct: 120 ----------HGIDIKGKHLVVLGAGGAATAIQVQAALDGAKQITIFNRQDEFYSRAEST 169
Query: 407 AD-------AVSGEALHFEYLHEFFPE--KGMILANASAIGMEPNSDQSPVPKEALKAYE 457
A AV + + E IL NA+ +GM+P+ S V L+A
Sbjct: 170 AKKLAEAAPAVKVDVVQLENTDRLKAAIADADILVNATTVGMKPDDGVSLVDPSFLRADL 229
Query: 458 LVFDAVYTPRNTRLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAP 506
+V D VY P T+L+ +A +VGA G M + Q ++L+TG P
Sbjct: 230 VVADTVYNPLKTKLIEDAEKVGAKTAPGKGMLLWQGAAGYQLWTGQDMP 278
>gi|212694466|ref|ZP_03302594.1| hypothetical protein BACDOR_03994 [Bacteroides dorei DSM 17855]
gi|237711195|ref|ZP_04541676.1| shikimate 5-dehydrogenase [Bacteroides sp. 9_1_42FAA]
gi|265750787|ref|ZP_06086850.1| shikimate 5-dehydrogenase [Bacteroides sp. 3_1_33FAA]
gi|423228191|ref|ZP_17214597.1| shikimate 5-dehydrogenase [Bacteroides dorei CL02T00C15]
gi|423239305|ref|ZP_17220421.1| shikimate 5-dehydrogenase [Bacteroides dorei CL03T12C01]
gi|423243454|ref|ZP_17224530.1| shikimate 5-dehydrogenase [Bacteroides dorei CL02T12C06]
gi|212662967|gb|EEB23541.1| putative shikimate dehydrogenase [Bacteroides dorei DSM 17855]
gi|229455039|gb|EEO60760.1| shikimate 5-dehydrogenase [Bacteroides sp. 9_1_42FAA]
gi|263237683|gb|EEZ23133.1| shikimate 5-dehydrogenase [Bacteroides sp. 3_1_33FAA]
gi|392636974|gb|EIY30852.1| shikimate 5-dehydrogenase [Bacteroides dorei CL02T00C15]
gi|392645207|gb|EIY38939.1| shikimate 5-dehydrogenase [Bacteroides dorei CL02T12C06]
gi|392647092|gb|EIY40798.1| shikimate 5-dehydrogenase [Bacteroides dorei CL03T12C01]
Length = 246
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 79/268 (29%), Positives = 129/268 (48%), Gaps = 28/268 (10%)
Query: 238 KIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLVDDVKEFFRTY-SGTDFAGFSVGI 296
K +GL+ P+GHS N F + YV + +KE + D GF+V I
Sbjct: 2 KKYGLIGYPLGHSFSKNFFNEKFHSENIDAEYVNFEIPSIKELPSVLLANPDLVGFNVTI 61
Query: 297 PHKEPAVACCDEVHPLAKSIGAVNTI--IRRPIDGKLVGYNTDCESAISAIEDALRERQG 354
P+KE ++ DE+ A +IGAVN I +R+ KL+GYN+D +I D L E Q
Sbjct: 62 PYKEQVISYLDELDKDAAAIGAVNVIKIVRQKGKTKLIGYNSDVIGFTQSI-DPLLEPQH 120
Query: 355 INGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGARVIIFNRNYERAKALADAVSGEA 414
K +++G GGA +A+A+G K G +RN + ++ E
Sbjct: 121 -------------KKALILGTGGASKAIAYGLKKLGLECKFVSRNLREEMLTYNQLTPEI 167
Query: 415 LHFEYLHEFFPEKGMILANASAIGMEPNSDQSP-VPKEALKAYELVFDAVYTPRNTRLLR 473
+ EY ++ N + +GM P +D+ P +P + L L++D +Y P T ++
Sbjct: 168 MD-EY---------KVIVNCTPVGMYPRADEYPNIPYQYLTPNHLLYDLLYNPDTTLFMK 217
Query: 474 EAAEVGATVVSGVEMFIRQALGQFRLFT 501
+ A+ GA +G+EM + QA G + ++
Sbjct: 218 KGADKGAITKNGLEMLLLQAFGAWDIWN 245
>gi|418010001|ref|ZP_12649786.1| shikimate/quinate 5-dehydrogenase I beta [Lactobacillus casei
Lc-10]
gi|410554692|gb|EKQ28662.1| shikimate/quinate 5-dehydrogenase I beta [Lactobacillus casei
Lc-10]
Length = 298
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 92/289 (31%), Positives = 137/289 (47%), Gaps = 30/289 (10%)
Query: 233 INPDTKIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLV--DDVKEFFRTYSGTDFA 290
I+ T + L+ +PVGHS P ++N +F+ + + YV V + + E
Sbjct: 5 ISGTTGLLCLLGSPVGHSGSPAMYNFSFQKQKIDAAYVAFDVTKEQMPEALNAMRLFKMR 64
Query: 291 GFSVGIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALR 350
G +V +P K A DE+ P AK IGAVN ++ DGKL+G+ TD + +++
Sbjct: 65 GGNVTMPCKNVAATLMDELSPAAKIIGAVNVVVND--DGKLIGHITDGIGFVRNLQE--- 119
Query: 351 ERQGINGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGARVI-IFNRN---YERAKAL 406
H I GK V++GAGGA A+ A GA+ I IFNR Y RA++
Sbjct: 120 ----------HGIDIKGKHLVVLGAGGAATAIQVQAALDGAKQITIFNRQDEFYSRAEST 169
Query: 407 AD-------AVSGEALHFEYLHEFFPE--KGMILANASAIGMEPNSDQSPVPKEALKAYE 457
A AV + + E IL NA+ +GM+P+ S V L+A
Sbjct: 170 AKKLAEAAPAVKVDVVQLENTDRLKAAIADADILVNATTVGMKPDDGVSLVDPSFLRADL 229
Query: 458 LVFDAVYTPRNTRLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAP 506
+V D VY P T+L+ +A +VGA G M + Q ++L+TG P
Sbjct: 230 VVADTVYNPLKTKLIEDAEKVGAKTAPGKGMLLWQGAAGYQLWTGQNMP 278
>gi|384048441|ref|YP_005496458.1| shikimate dehydrogenase [Bacillus megaterium WSH-002]
gi|345446132|gb|AEN91149.1| Putative Shikimate dehydrogenase [Bacillus megaterium WSH-002]
Length = 298
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 89/302 (29%), Positives = 145/302 (48%), Gaps = 33/302 (10%)
Query: 233 INPDTKIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLV--DDVKEFFRTYSGTDFA 290
IN T++ GL++ P+GHS P +HN AF+ N Y+ V D +++ + +
Sbjct: 7 INGKTQLIGLLATPIGHSLSPSMHNMAFKKLGLNYAYLAFEVGNDSLEDAIKGLRALNVK 66
Query: 291 GFSVGIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALR 350
GF+V +P+K + DE+ AK GAVNT++ +G LVG++TD I +++
Sbjct: 67 GFNVSMPNKTKILPFLDELADSAKFSGAVNTVVND--NGVLVGHSTDGMGYIRNLKE--- 121
Query: 351 ERQGINGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRG-ARVIIFNRN---YERAKAL 406
NGV I GK LVG+GGA +A A G + IF R+ Y +A
Sbjct: 122 -----NGV-----DITGKKMTLVGSGGAATPIAIQAALEGLEELTIFARHDEFYSKAVEN 171
Query: 407 ADAVSGEALHFEYLHEFFPEKGM-----------ILANASAIGMEPNSDQSPVPK-EALK 454
++ E H + + + IL N + +GM+P + S + L+
Sbjct: 172 VKIINEEMKHVSCKAKLYSLEDTDRLREEIRTSDILTNGTGVGMKPLEEFSIIEDISMLR 231
Query: 455 AYELVFDAVYTPRNTRLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRKLV 514
+V D VY P ++LL +A +G V+G+ M I Q F L+TG P +++++ +
Sbjct: 232 PDLIVTDVVYMPMKSKLLEQAESIGCHTVNGIGMMIWQGAMAFELWTGKEMPVEYIKEQM 291
Query: 515 LE 516
E
Sbjct: 292 FE 293
>gi|347547878|ref|YP_004854206.1| putative shikimate 5-dehydrogenase [Listeria ivanovii subsp.
ivanovii PAM 55]
gi|346980949|emb|CBW84873.1| Putative shikimate 5-dehydrogenase [Listeria ivanovii subsp.
ivanovii PAM 55]
Length = 291
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 83/300 (27%), Positives = 146/300 (48%), Gaps = 30/300 (10%)
Query: 231 EHINPDTKIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLVDD--VKEFFRTYSGTD 288
E I T++ GL++ P+ HS P +HN AF + +Y+ V D +K+ + + +
Sbjct: 7 ERITGHTELIGLIATPIRHSLSPTMHNEAFAKLGLDYVYLAFEVGDKELKDVVQGFRAMN 66
Query: 289 FAGFSVGIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDA 348
G++V +P+K D++ P A+ +GAVNT++ +G L G+ TD + A+++A
Sbjct: 67 LRGWNVSMPNKTNIHKYLDKLSPAAELVGAVNTVVND--NGVLTGHITDGTGYMRALKEA 124
Query: 349 LRERQGINGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGARVI-IFNRN---YERAK 404
+ I GK + GAGGA A+ A G + I IFNR Y A+
Sbjct: 125 GHD-------------IIGKKMTICGAGGAATAICIQAALDGVKEISIFNRKDDFYANAQ 171
Query: 405 ALADAVSGEA------LHFEYLHEFFPE--KGMILANASAIGMEPNSDQSPVPK-EALKA 455
+ ++ + E + E + +I NA+ +GM+P ++ +P + L+
Sbjct: 172 KTVEKINSKTDCKAQLFDIEDHEQLRKEISESVIFTNATGVGMKPFEGETLLPSADMLRP 231
Query: 456 YELVFDAVYTPRNTRLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRKLVL 515
+V D VY P TRLL A E G ++G+ M + Q F ++T P D++++++
Sbjct: 232 ELIVSDVVYKPTKTRLLEIAEEQGCQTLNGLGMMLWQGAKAFEIWTHKEMPVDYIKEILF 291
>gi|284047672|ref|YP_003398011.1| shikimate dehydrogenase [Acidaminococcus fermentans DSM 20731]
gi|283951893|gb|ADB46696.1| Shikimate dehydrogenase substrate binding domain protein
[Acidaminococcus fermentans DSM 20731]
Length = 288
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 82/291 (28%), Positives = 143/291 (49%), Gaps = 27/291 (9%)
Query: 232 HINPDTKIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLV--DDVKEFFRTYSGTDF 289
HI+ T+ L+ +P+ S + N + N +Y + + + +
Sbjct: 2 HIDIHTRFITLLGDPLAQSFAARMQNRGYEAAGLNLVYFYTITGQEHLGDIVNGLRYMPV 61
Query: 290 AGFSVGIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDAL 349
AGF+V P+K + DE+ PL + +G+ NT+++ P DG+L GYNTD +A+ +A
Sbjct: 62 AGFAVTKPNKVKVLEYLDELDPLCRKMGSSNTVVKLP-DGRLKGYNTDGTGFYTALTEA- 119
Query: 350 RERQGINGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGA-RVIIFNRNYERAKALAD 408
GI+ + + F G+GGAGRA+ GA ++ I + E A++L +
Sbjct: 120 ----GID--------VTKERFFCFGSGGAGRAMCSVLAYHGATKIWITDLFPESARSLVE 167
Query: 409 AVSGEALHFEYLHEFFPEK-------GMILANASAIGMEPNSDQSPVPKEALKAYELVFD 461
++ +F + E P + ++ NAS +GM + ++P+P E ++ + FD
Sbjct: 168 DINK---NFAPVAEMVPYEDFSKVGEATVVLNASGVGMGQSIGKTPLPPEFIQKDQFYFD 224
Query: 462 AVYTPRNTRLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRK 512
A Y P TR L A + G V++G+ M + Q Q L++G APE+ MR+
Sbjct: 225 ACYNPARTRFLENAEKAGCRVMNGLTMSLYQGTAQVELWSGQKAPEEAMRR 275
>gi|410670626|ref|YP_006922997.1| shikimate 5-dehydrogenase [Methanolobus psychrophilus R15]
gi|409169754|gb|AFV23629.1| shikimate 5-dehydrogenase [Methanolobus psychrophilus R15]
Length = 273
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 101/284 (35%), Positives = 142/284 (50%), Gaps = 24/284 (8%)
Query: 239 IFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLV--DDVKEFFRTYSGTDFAGFSVGI 296
+F + +PVGHS P +HN AF Y V +++K+ F G ++ +
Sbjct: 4 VFAVFGDPVGHSLSPAMHNAAFEALGMECTYHAFKVGRENLKDALAGAKAMGFGGVNLTV 63
Query: 297 PHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALRERQGIN 356
P K+ A++ D PLA +IGAVNTI + + GYNTD A A+E+ +G++
Sbjct: 64 PLKQEALSIAD-ADPLAAAIGAVNTIDFKE---GMKGYNTDGLGAKRALEE-----EGVD 114
Query: 357 GVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGARVIIFNRNYERAKALADAVSG---- 412
I G ++ GAGGA RA+AF GA V I NR E+A LA VS
Sbjct: 115 --------IRGSEVLIAGAGGAARAIAFQFARDGASVTIANRTPEKALELAADVSPVGKV 166
Query: 413 EALHFEYLHEFFPEKGMILANASAIGMEPNSDQSPVPKEALKAYELVFDAVYTPRNTRLL 472
FE L E L N + +GM P+++++ E + VFD VY P TRLL
Sbjct: 167 RGCGFENLRALIGESD-TLVNCTVLGMHPDTERTIATSEDMHPDLTVFDIVYNPLETRLL 225
Query: 473 REAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRKLVLE 516
+EA GA V+GV M + Q FR++TG P D M++ VLE
Sbjct: 226 KEARLAGAKRVNGVMMLVYQGAEAFRIWTGVEPPVDIMKRAVLE 269
>gi|346309564|ref|ZP_08851648.1| shikimate 5-dehydrogenase [Dorea formicigenerans 4_6_53AFAA]
gi|345898693|gb|EGX68558.1| shikimate 5-dehydrogenase [Dorea formicigenerans 4_6_53AFAA]
Length = 291
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 93/314 (29%), Positives = 140/314 (44%), Gaps = 53/314 (16%)
Query: 231 EHINPDTKIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLV--DDVKEFFRTYSGTD 288
+ I+ T + L+ +PVGHS P +HN +F + Y+ + D V EF
Sbjct: 3 KRISGTTTLLALIGSPVGHSSSPAMHNYSFEKLGLDYAYMAFEIKEDQVGEFLDAARLLK 62
Query: 289 FAGFSVGIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDA 348
GF+V +P K DE+ P A+ +GA NT++ +GKL+G+NTD +
Sbjct: 63 IRGFNVTMPCKMEVARQVDELSPAAQIMGASNTVVNE--NGKLIGHNTDGVGFVK----- 115
Query: 349 LRERQGINGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGARVI-IFNR---NYERAK 404
+A H + K L+G GGAG A+ GA I +FNR N+E+ +
Sbjct: 116 --------NLAEHGVSVKDKTITLMGGGGAGTAIFVQLALDGASEIRVFNRKGANFEKLE 167
Query: 405 ALADAVSGEALHFEYLHEFFPE-------------------KGMILANASAIGMEPNSDQ 445
+A + EF PE + IL NA+ +GM+PN
Sbjct: 168 KIAKKIL----------EFAPECKIQVCDMADKKALYKSIGESDILVNATNVGMKPNEKG 217
Query: 446 SPVPKEALKAYELVF-DAVYTPRNTRLLREAAEVGAT-VVSGVEMFIRQALGQFRLFTGG 503
+ + ++ +LV + +Y P+ TR++REA E G V+ G M + Q F LFTG
Sbjct: 218 TMIQDTSVYREDLVVAEIIYNPKETRMMREAKEAGVKCVIGGKGMLLWQGAEAFHLFTGQ 277
Query: 504 LAP-EDFMRKLVLE 516
P ED K E
Sbjct: 278 EMPVEDVKAKFFAE 291
>gi|417992037|ref|ZP_12632405.1| shikimate/quinate 5-dehydrogenase I beta [Lactobacillus casei
CRF28]
gi|410534620|gb|EKQ09263.1| shikimate/quinate 5-dehydrogenase I beta [Lactobacillus casei
CRF28]
Length = 298
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 92/289 (31%), Positives = 137/289 (47%), Gaps = 30/289 (10%)
Query: 233 INPDTKIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLV--DDVKEFFRTYSGTDFA 290
I+ T + L+ +PVGHS P ++N +F+ + + YV V + + E
Sbjct: 5 ISGTTGLLCLLGSPVGHSGSPAMYNFSFQKQKIDAAYVAFDVTKEQMPEALNALRLFKMR 64
Query: 291 GFSVGIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALR 350
G +V +P K A DE+ P AK IGAVN ++ DGKL+G+ TD + +++
Sbjct: 65 GGNVTMPCKNVAATLMDELSPAAKIIGAVNVVVND--DGKLIGHITDGIGFVRNLQE--- 119
Query: 351 ERQGINGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGARVI-IFNRN---YERAKAL 406
H I GK V++GAGGA A+ A GA+ I IFNR Y RA++
Sbjct: 120 ----------HGIDIKGKHLVVLGAGGAATAIQVQAALDGAKQITIFNRQDEFYSRAEST 169
Query: 407 AD-------AVSGEALHFEYLHEFFPE--KGMILANASAIGMEPNSDQSPVPKEALKAYE 457
A AV + + E IL NA+ +GM+P+ S V L+A
Sbjct: 170 AKKLAEAAPAVKVDVVQLENTDRLKAAIADADILVNATTVGMKPDDGVSLVDPSFLRADL 229
Query: 458 LVFDAVYTPRNTRLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAP 506
+V D VY P T+L+ +A +VGA G M + Q ++L+TG P
Sbjct: 230 VVADTVYNPLKTKLIEDAEKVGAKTAPGKGMLLWQGAAGYQLWTGQDMP 278
>gi|384085714|ref|ZP_09996889.1| shikimate 5-dehydrogenase [Acidithiobacillus thiooxidans ATCC
19377]
Length = 294
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 89/295 (30%), Positives = 141/295 (47%), Gaps = 28/295 (9%)
Query: 232 HINPDTKIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVP--MLVDDVKEFFRTYSGTDF 289
H +T ++G++ +PV HS P +H + + +YVP ++ D+ + + +
Sbjct: 9 HPGGETAVYGIIGDPVKHSLSPWMHRLFAQQLGIDMVYVPFPVMAADLPKALKGLAAAGV 68
Query: 290 AGFSVGIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDAL 349
G +V +PHKE DE+ P A IGAVNT+ G+ +G NTD + AL
Sbjct: 69 LGLNVTVPHKESTKILMDELSPAAAQIGAVNTV--HYAAGRFMGDNTDA----VGFQRAL 122
Query: 350 RERQGINGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGARVI-IFNRNYERAKALAD 408
G N + P+ +++GAGGA RA+ + + G I + NR+ ERA+ LA
Sbjct: 123 ERHAGDN---WRSGPV-----LIIGAGGAARAIIYALGTAGCPAIYVANRHVERAEKLAA 174
Query: 409 AVSGEALH-----FEYLHEFFPEKGMILANASAIGMEPNSDQSPVPKEALKAYELVFDAV 463
LH + L P+ ++L N SA+G+ S + E L + V+D V
Sbjct: 175 EFPQFPLHPLPLERQILARILPQT-LLLVNTSALGLYGESHPE-LDLELLPNHGNVYDIV 232
Query: 464 YTPRNTRLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAP----EDFMRKLV 514
Y P T LLR A + G + G+ M + Q FR++TG L ED +R+ +
Sbjct: 233 YNPLETPLLRAARQYGRVAIDGLGMLVEQGAESFRIWTGVLPQTQTVEDTLRRWL 287
>gi|386080684|ref|YP_005994209.1| shikimate 5-dehydrogenase [Pantoea ananatis PA13]
gi|354989865|gb|AER33989.1| shikimate 5-dehydrogenase AroE [Pantoea ananatis PA13]
Length = 287
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 87/303 (28%), Positives = 145/303 (47%), Gaps = 36/303 (11%)
Query: 231 EHINPDTKIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLVD--DVKEFFRTYSGTD 288
E I T++ GL++ P+ HS P +HN AF H + +Y+ V ++++ + +
Sbjct: 3 ERITGHTELIGLIATPIRHSMSPTMHNEAFAHLGLDYVYLAFEVGTAELEKVVQGFRALK 62
Query: 289 FAGFSVGIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDA 348
G +V +P+K D + P A+ +GAVNT++ +G L G+ TD + A+ +
Sbjct: 63 LRGCNVSMPNKTEVCRYLDTLSPAAQLVGAVNTVVND--NGVLTGHITDGTGYMRALAE- 119
Query: 349 LRERQGINGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGARVI-IFNRNYERAKALA 407
+GI+ I GK ++GAGGA A+ A G + I +FN +R K A
Sbjct: 120 ----EGID--------ILGKKMTILGAGGAATAICVQAALDGVKAISVFN---QRDKFFA 164
Query: 408 DA---VSGEALHFEYLHEFFP-----------EKGMILANASAIGMEPNSDQSPVPKEAL 453
+A V+ H + F +IL NA+ +GM+P Q +P E+
Sbjct: 165 NAQETVAKIRAHTDCEIHLFDLDDHDRLRAEINDSVILTNATGVGMKPFEGQMLLPDESF 224
Query: 454 KAYELVF-DAVYTPRNTRLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRK 512
EL+ D VY PR T LL A + G +++G+ M + Q F ++TG P D ++
Sbjct: 225 LRPELIVSDVVYIPRKTHLLETAEKKGCRIINGLGMMLWQGASAFEIWTGKPMPVDHIKN 284
Query: 513 LVL 515
++
Sbjct: 285 ILF 287
>gi|21674623|ref|NP_662688.1| shikimate 5-dehydrogenase [Chlorobium tepidum TLS]
gi|34222587|sp|Q8KBH8.1|AROE_CHLTE RecName: Full=Shikimate dehydrogenase
gi|21647824|gb|AAM73030.1| shikimate 5-dehydrogenase [Chlorobium tepidum TLS]
Length = 295
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 102/304 (33%), Positives = 145/304 (47%), Gaps = 50/304 (16%)
Query: 238 KIFGLVSNPVGHSKGPILHNPAFR-------HTRFNGIYVPMLVDDVKEFFRTYSGTDFA 290
KIFGL+ V +S P++HN F +T FN I P ++ D + R A
Sbjct: 8 KIFGLIGKHVDYSWSPLIHNTGFEALGLPCVYTIFN-IPSPEMIGDALKGSRALG---IA 63
Query: 291 GFSVGIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALR 350
GFSV IP+K+ V DE+ P A SIGAVNTI+ +G+L+GYNTD
Sbjct: 64 GFSVTIPYKKTVVPFLDELSPEALSIGAVNTIVND--NGRLLGYNTD------------- 108
Query: 351 ERQGINGVASHTSPIAGKI----FVLVGAGGAGRAL--AFGAKSRGARVIIFNRNYERAK 404
I+G A+ P+A I + G GGA A AF + + V++ R+ ++A+
Sbjct: 109 ----IDGFAAPLLPMAESIRNRPVCIFGNGGAALAAVEAFRLRFNPSSVLLVVRDTQKAE 164
Query: 405 ------ALADAVS---GEALHFEYLHEFFPEKGMILANASAIGMEPNSDQS----PVPKE 451
A D V+ G + + +L NA+ +G +D P
Sbjct: 165 DMLEEYAYRDLVTIHAGREIDQPACSKLI-RDCRVLVNATPVGTAGRNDHIHSILPTGHG 223
Query: 452 ALKAYELVFDAVYTPRNTRLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMR 511
L ++V+D VY P T LL EA GATV++G+EM I QA F ++TG P D +R
Sbjct: 224 LLHDGQIVYDMVYNPPETPLLAEARAAGATVIAGIEMLIAQAARAFSIWTGQELPVDLVR 283
Query: 512 KLVL 515
K VL
Sbjct: 284 KTVL 287
>gi|365894088|ref|ZP_09432248.1| Shikimate dehydrogenase (modular protein) [Bradyrhizobium sp. STM
3843]
gi|365425153|emb|CCE04790.1| Shikimate dehydrogenase (modular protein) [Bradyrhizobium sp. STM
3843]
Length = 517
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 98/281 (34%), Positives = 138/281 (49%), Gaps = 23/281 (8%)
Query: 239 IFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLV-----DDVKEFFRTYSGTDFAGFS 293
+ GL+ P+ HS P +H A Y + V + ++ FAG +
Sbjct: 240 LTGLIGAPIKHSASPAMHEEAASALGLRCHYQLIEVAGADRERLRGLLDGVRQMGFAGVN 299
Query: 294 VGIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALRERQ 353
V P+KE V DE+ P AK+IGAVNT++ R +G+LVG+NTD A+ +
Sbjct: 300 VTFPYKEAVVELLDELAPEAKAIGAVNTVVVR--EGRLVGHNTDTTGFARAVAPLV---- 353
Query: 354 GINGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRG-ARVIIFNRNYERAKALADAVSG 412
AS P+A LVGAGG G+A+AF S G + + I + + +A ALA +
Sbjct: 354 ----TASGRGPVA-----LVGAGGVGKAIAFALASHGVSELRIMDSDLVKANALAALLCD 404
Query: 413 EALHFEYLHEFFPEKGMI-LANASAIGMEPNSDQSPVPKEALKAYELVFDAVYTPRNTRL 471
+ +G + L N + +GM PN D SPVP+ L A V DAVY+P T L
Sbjct: 405 HPGVSVADNVDAALRGAVGLVNGTPVGMLPNRD-SPVPETLLHAGLWVADAVYSPLWTPL 463
Query: 472 LREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRK 512
L A GA V+SG ++ I QA F+LFTG D M +
Sbjct: 464 LSAAKTKGAQVMSGRDLAIYQAADAFQLFTGMAPSADAMAR 504
>gi|357633895|ref|ZP_09131773.1| shikimate 5-dehydrogenase [Desulfovibrio sp. FW1012B]
gi|357582449|gb|EHJ47782.1| shikimate 5-dehydrogenase [Desulfovibrio sp. FW1012B]
Length = 270
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 88/281 (31%), Positives = 133/281 (47%), Gaps = 22/281 (7%)
Query: 237 TKIFGLVSNPVGHSKGPILHNPAFRHTRFNGIY--VPMLVDDVKEFFRTYSGTDFAGFSV 294
T+++G++ +P+GH+ P++HN F Y L +++ F T G SV
Sbjct: 2 TRLYGIIGHPLGHTLSPLVHNWGFARFGIEARYEAWATLPEELPAFMARVRETPIQGLSV 61
Query: 295 GIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALRERQG 354
IPHK + D V L + +GAVNT+ R G L NTD E +
Sbjct: 62 TIPHKTAVMDFVDVVTDLGREVGAVNTLFWR--GGALHADNTDVEGFCRPLV-------- 111
Query: 355 INGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGARVIIFNRNYERAKALADAVSGEA 414
+ G+A + + G R L R+ + R+ ++A+ALA E
Sbjct: 112 VRGIAPGAALLLGCGGAARAVAAGLRRLQV------PRIGVTGRSLDKARALALEFGLEP 165
Query: 415 LHFEYLHEFFPEKGMILANASAIGMEPNSDQ-SPVPKEALKAYELVFDAVYTPRNTRLLR 473
+ +E +F ++ NA+ IGM + SP P A + L +D VY P TR L
Sbjct: 166 VAWEDRADF---PAALVVNATPIGMSGRQEGVSPYPAAAWEPGRLAYDLVYNPYETRFLA 222
Query: 474 EAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRKLV 514
EAA GA VV G+EMF+ QA+ QF L+TG + P+D +R L+
Sbjct: 223 EAARAGAGVVPGLEMFLYQAVEQFCLWTGRVLPDDELRPLL 263
>gi|225175008|ref|ZP_03729005.1| shikimate 5-dehydrogenase [Dethiobacter alkaliphilus AHT 1]
gi|225169648|gb|EEG78445.1| shikimate 5-dehydrogenase [Dethiobacter alkaliphilus AHT 1]
Length = 277
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 91/284 (32%), Positives = 140/284 (49%), Gaps = 25/284 (8%)
Query: 237 TKIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLV--DDVKEFFRTYSGTDFAGFSV 294
TKI G+ +PV HS P +HN AF H + +YVP V DD+K + + G +V
Sbjct: 7 TKITGIFGDPVEHSLSPAMHNAAFAHLDLDYVYVPFHVNTDDIKRAVGSIKALNITGVNV 66
Query: 295 GIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALRERQG 354
+PHK+ + DE+ A AVNTI+ + DG L GYNTD I D+L+E G
Sbjct: 67 TVPHKQDVIPFLDEIDKTASRCSAVNTIVNK--DGILTGYNTDGTGFI----DSLKE-YG 119
Query: 355 INGVASHTSPIAGKIFVLVGAGGAGRAL-AFGAKSRGARVIIFNRNYERAKALADAVSGE 413
N K V++GAGG+ RA+ A +++ +++ I NR+ E A+ LA+++ G+
Sbjct: 120 FNP--------KDKEVVIIGAGGSARAICAALLENKVSQITIINRSLENAEQLAESL-GQ 170
Query: 414 ALHFE---YLHEFFPE--KGMILANASAIGMEPNSDQSPVPKEALKAYELVFDAVYTPRN 468
A F + + P ++ N +I + D + + A L +D Y
Sbjct: 171 AHTFSVIPLISNYSPSIYSADLVVNTLSIPFK-QEDGDWLVDLSSAAGALFYDLRYGKMP 229
Query: 469 TRLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRK 512
+ L A E+ + + G+ M + Q F LFTG AP D M+K
Sbjct: 230 SDFLTYAKELKSPGLDGLGMLLHQGARAFELFTGTKAPTDIMKK 273
>gi|307705053|ref|ZP_07641936.1| shikimate dehydrogenase [Streptococcus mitis SK597]
gi|307621401|gb|EFO00455.1| shikimate dehydrogenase [Streptococcus mitis SK597]
Length = 284
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 92/298 (30%), Positives = 147/298 (49%), Gaps = 37/298 (12%)
Query: 237 TKIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLVD--DVKEFFRTYSGTDFAGFSV 294
T++ +V+NP+ HS P +HN AF T NG YV ++ D+ E G ++
Sbjct: 7 TRLAAVVANPIKHSISPFIHNSAFEATATNGAYVAWEIEASDLAETVANIRRYQMFGINL 66
Query: 295 GIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALRERQG 354
+P+KE + DE+ A+ IGAVNT++ +G L+GYNTD + ++
Sbjct: 67 SMPYKEQVIPYLDELSDEARLIGAVNTVVNE--NGNLIGYNTDGKGFFKSL--------- 115
Query: 355 INGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRG-ARVIIFNR--NYERAKALADAVS 411
S T I GK L+GAGGA +++ A G +++ +F R + E+ + D +
Sbjct: 116 ----PSFT--ITGKKMTLLGAGGAAKSILAQAILDGVSQISVFVRSVSMEKTRPYLDKLQ 169
Query: 412 GEALHFEY----------LHEFFPEKGMILANASAIGMEPNSDQSPVPKE-ALKAYELVF 460
E F+ L E E + L NA+++GM+ S SPVP+ L LV
Sbjct: 170 -EQTGFKVDLYALEDVSELQERIAESDL-LVNATSVGMDGQS--SPVPESIVLSETLLVA 225
Query: 461 DAVYTPRNTRLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRKLVLEQF 518
D +Y P T L+ A G + V+G+ M + QA F+L+TG P + + K + E++
Sbjct: 226 DIIYQPFETPFLKWARSQGNSAVNGLGMLLYQAAEAFQLWTGKEMPTEDIWKSLTEKY 283
>gi|255263051|ref|ZP_05342393.1| shikimate 5-dehydrogenase [Thalassiobium sp. R2A62]
gi|255105386|gb|EET48060.1| shikimate 5-dehydrogenase [Thalassiobium sp. R2A62]
Length = 277
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 88/272 (32%), Positives = 134/272 (49%), Gaps = 20/272 (7%)
Query: 241 GLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLVDD--VKEFFRTYSGTDFAGFSVGIPH 298
G++ +P+ HSK P LH + G Y+PM V D ++E R F G ++ IPH
Sbjct: 10 GVIGSPIAHSKSPALHGHWLKTYGLKGAYIPMDVTDSNLEEVIRMLPKMGFVGVNITIPH 69
Query: 299 KEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALRERQGINGV 358
K A+ D++ A IGA NT+I R DGK+ NTD I+ ++ Q +G
Sbjct: 70 KVAALWIADQMTDRATLIGAANTLIFRR-DGKIHADNTDGYGFIANLKQGAPGWQPASGA 128
Query: 359 ASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGA-RVIIFNRNYERAKALADAVSGEALHF 417
A V++GAGGA RA+ G R+I+ NR +A+ L +
Sbjct: 129 A-----------VVLGAGGAARAVIASLIEAGTTRIILTNRTRLKAEGLKSEFGSKVEVV 177
Query: 418 EYLHE-FFPEKGMILANASAIGMEPNSDQSPVPKEALKAYELVFDAVYTPRNTRLLREAA 476
+++ E+ + N +++GM + + VP + L+ +V D VYTP TRLL+EA
Sbjct: 178 DWVQAGNVLEEATTVINTTSLGMT-GAPEFRVPLDGLRPGTVVTDIVYTPLKTRLLQEAE 236
Query: 477 EVGATVVSGVEMFIRQALGQF-RLFTGGLAPE 507
+ G V G+ M + QA+ F R F G+ PE
Sbjct: 237 QAGCITVDGLGMLLHQAVPAFERWF--GVRPE 266
>gi|62185307|ref|YP_220092.1| bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase
[Chlamydophila abortus S26/3]
gi|424825347|ref|ZP_18250334.1| bifunctional 3-dehydroquinate dehydrogenase/shikimate dehydrogenase
protein [Chlamydophila abortus LLG]
gi|62148374|emb|CAH64141.1| shikimate 5-dehydrogenase [Chlamydophila abortus S26/3]
gi|333410446|gb|EGK69433.1| bifunctional 3-dehydroquinate dehydrogenase/shikimate dehydrogenase
protein [Chlamydophila abortus LLG]
Length = 477
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 124/482 (25%), Positives = 211/482 (43%), Gaps = 48/482 (9%)
Query: 36 DLVELCIDSMEFSHISEVDKLIQHPTLPAIVSYRLKSSRKSSDEACKNTCLQVLRRALDL 95
D +EL ID + +E+ L+ P + L+ S+ A LQ+ +L
Sbjct: 26 DSIELRIDCLLSLSSNELKHLVSLAKKPILT---LRKHTSLSEIAWIERTLQLA----EL 78
Query: 96 DVEFVEMDYEVASDPLMSEIIYSRSNTKIIVSSYLNGGGKPTTEKLGDVIACMQATGADV 155
E++++D + + L ++I + KII+S + T+E + ++ M A
Sbjct: 79 QPEYLDIDKDFPKEAL-AKIQKNYPKIKIILSYH-----SETSEHIPNLCKEMLRQQAHH 132
Query: 156 MKLEIAVDSITDLAPVFEMLTHCQVPLIALAVGSRGLISQLLGPKFGGFLVYGS--LGGK 213
K+ I TD ++ H L +G+ G+ S++L P + Y S K
Sbjct: 133 YKIAITSTKSTDTLRCIQIKKHLPENTTLLCMGNAGIASRILSPLMKNAINYASGIHAPK 192
Query: 214 SVPGLPTLVSLKQVYQLEHINPDTKIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPML 273
PG ++ L Y +++ + +I+GL+ NPV S + HN F + N Y+ +L
Sbjct: 193 VAPGQLSIEDL-LAYNYTNLSAEARIYGLIGNPVDRSISHLSHNKLFSELQLNMSYIKIL 251
Query: 274 VD--DVKEFFRTYSGTDFAGFSVGIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKL 331
+ ++ EFF F G SV +P K + D + P + + NT++ + K+
Sbjct: 252 LAPYELNEFFSLTRDLPFGGLSVTMPFKTAVLEYIDILDPSVQQCQSCNTLVFH--NNKI 309
Query: 332 VGYNTDCESAISAIEDALRERQGINGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGA 391
GYNTD ++ L +R+ I P+ +VG+GGA +A+A GA
Sbjct: 310 AGYNTDGLGLLN-----LLKRKNI--------PLQNMHVGIVGSGGAAKAIATTFAYSGA 356
Query: 392 RVIIFNRNYERAKALADAVSGEALHFEYLHEFFPEKGMILANASAIGMEPNSDQSPVPKE 451
++ IFNR A+ L+ G+A L E +IL + P D +P
Sbjct: 357 QISIFNRTKAHAEKLSVLCHGQAFPLHSLSEHHNIDILILC------LPPGVD---IP-- 405
Query: 452 ALKAY-ELVFDAVYTPRNTRLLREAAEVGATVVSGVEMFIRQALGQFRL-FTGGLAPEDF 509
+ Y ++ D P+ + ++A E G ++ G EMF QAL QF L F L+ E+
Sbjct: 406 --EIYPPVIIDINTLPKESLYTKKAKERGCQILYGYEMFAEQALLQFSLWFPDKLSQENR 463
Query: 510 MR 511
R
Sbjct: 464 ER 465
>gi|386285382|ref|ZP_10062597.1| shikimate 5-dehydrogenase [Sulfurovum sp. AR]
gi|385343493|gb|EIF50214.1| shikimate 5-dehydrogenase [Sulfurovum sp. AR]
Length = 264
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 79/268 (29%), Positives = 128/268 (47%), Gaps = 29/268 (10%)
Query: 238 KIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLVDDVKEFFRTYSGTDFAGFSVGIP 297
++F + NPV HSK P++HN +F+ +F+G Y L+++ T+ G ++ +P
Sbjct: 3 QLFAIFGNPVSHSKSPLMHNLSFQGLKFDGCYTRYLLEEGSRLKETFFSLGLKGINITVP 62
Query: 298 HKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALRERQGING 357
HKE A A CD + P A+ +GAVNTI+ + +GKL GYNTD + AI E + +
Sbjct: 63 HKEHAYAACDVLDPFAQKVGAVNTIVEK--EGKLYGYNTDAPGFLKAI----SEFENVKT 116
Query: 358 VASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGARVIIFNRNYERAKALADAVSGEALHF 417
V + +GAGG ++ + K G V I NR+ +R + E F
Sbjct: 117 V------------LFLGAGGTAKSTSIILKEAGYEVTILNRSGDRLTYFKEN-GFETYTF 163
Query: 418 EYLHEFFPEKGMILANASAIGMEPNSDQSPVPKEALKAY----ELVFDAVYTPRNTRLLR 473
E +F P+ ++ N ++ G+E D P P + L+ + D +Y + T L+
Sbjct: 164 E---DFRPKPYDLVINMTSAGLE--DDALPAPSDILEKVVPTAKACVDVIYG-KETPFLK 217
Query: 474 EAAEVGATVVSGVEMFIRQALGQFRLFT 501
A G +M + Q + F FT
Sbjct: 218 LAKNQNKPTKDGSDMLLYQGIIAFEYFT 245
>gi|291548094|emb|CBL21202.1| shikimate dehydrogenase [Ruminococcus sp. SR1/5]
Length = 293
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 99/311 (31%), Positives = 144/311 (46%), Gaps = 47/311 (15%)
Query: 231 EHINPDTKIFGLVSNPVGHSKGPILHNPAFRHTRFNGIY---------VPMLVDDVKEFF 281
+ I T + L+ +PVGHS P ++N +F++ + Y VP +D ++ F
Sbjct: 3 QRIKGTTGLLALIGSPVGHSGSPAMYNFSFQYHNLDYAYMAFDIKEDQVPAALDAMRLF- 61
Query: 282 RTYSGTDFAGFSVGIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESA 341
G +V +P K C DE+ P AK IGAVNTI+ DGKLVG+ TD
Sbjct: 62 ------KMRGCNVTMPCKNKVAQCVDELSPAAKIIGAVNTIVNE--DGKLVGHITD---G 110
Query: 342 ISAIEDALRERQGINGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGARVI-IFNRN- 399
I + + L+E H + GK V++GAGGA AL GA I IFN +
Sbjct: 111 IGFVRN-LKE---------HGVDVKGKKMVVLGAGGAATALTVQCALDGAASIAIFNPDD 160
Query: 400 --YERAKALADAVSGEALHF----------EYLHEFFPEKGMILANASAIGMEPNSDQSP 447
+RAK A+ ++ E + L E ILAN + GM+P+ D +
Sbjct: 161 PFLDRAKGTAEKLAKEVPDCKVSVYCLDDQDKLREEIANAD-ILANGTLAGMKPHDDITL 219
Query: 448 VPKEALKAYELVFDAVYTPRNTRLLREAAEVGATV-VSGVEMFIRQALGQFRLFTGGLAP 506
V K +V D VY P T++++EA E G + V G M + Q ++L+TG P
Sbjct: 220 VDKSMFHKDLVVADCVYNPAETKMVKEAKEAGVKLAVGGKGMLLWQGAASYKLYTGLEMP 279
Query: 507 EDFMRKLVLEQ 517
D +K E
Sbjct: 280 TDEYQKFQAEN 290
>gi|76801055|ref|YP_326063.1| shikimate 5-dehydrogenase [Natronomonas pharaonis DSM 2160]
gi|121718364|sp|Q3ITN9.1|AROE_NATPD RecName: Full=Shikimate dehydrogenase
gi|76556920|emb|CAI48494.1| shikimate dehydrogenase [Natronomonas pharaonis DSM 2160]
Length = 264
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 99/278 (35%), Positives = 130/278 (46%), Gaps = 24/278 (8%)
Query: 238 KIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPM--LVDDVKEFFRTYSGTDFAGFSVG 295
++GL+ NPV HS P +H A+ + YV + + S G +V
Sbjct: 2 DVYGLIGNPVEHSVSPPMHEAAYEALGLDARYVTFEPASEQLDTALEGASALGVRGLNVT 61
Query: 296 IPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALRERQGI 355
IP KE + E PLA+ IGAVNTI +G+ G+NTD I A + ER G
Sbjct: 62 IPFKEDVLDVV-EPDPLAERIGAVNTI---DFEGEPTGHNTDAAGVIRAFQHHDVERSGT 117
Query: 356 NGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGARVIIFNRNYERAKALADAVSGEAL 415
V AGRA AF G V I NR RA ALA V
Sbjct: 118 AVVVGAGG--------------AGRAAAFALADEGMEVHIANRTVSRATALATEVPDATG 163
Query: 416 H-FEYLHEFFPEKGMILANASAIGMEPNSDQSPVPKEALKAYELVFDAVYTPRNTRLLRE 474
H + L E P+ +L NA+++GME +D++PVPK L V DAVY P TRLLRE
Sbjct: 164 HGLDELAELVPDAD-VLVNATSVGME--ADETPVPKRHLHEGLAVLDAVYAPLETRLLRE 220
Query: 475 AAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRK 512
A GAT + G M + Q + F ++TG AP + M +
Sbjct: 221 ADAAGATTIDGAWMLLFQGVEAFEIWTGKAAPVEPMNE 258
>gi|418007184|ref|ZP_12647076.1| shikimate/quinate 5-dehydrogenase I beta [Lactobacillus casei UW4]
gi|410549764|gb|EKQ23919.1| shikimate/quinate 5-dehydrogenase I beta [Lactobacillus casei UW4]
Length = 298
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 92/289 (31%), Positives = 137/289 (47%), Gaps = 30/289 (10%)
Query: 233 INPDTKIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLV--DDVKEFFRTYSGTDFA 290
I+ T + L+ +PVGHS P ++N +F+ + + YV V + + E
Sbjct: 5 ISGTTGLLCLLGSPVGHSGSPAMYNFSFQKQKIDAAYVAFDVTKEQMPEALNAMRLFKMR 64
Query: 291 GFSVGIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALR 350
G +V +P K A DE+ P AK IGAVN ++ DGKL+G+ TD + +++
Sbjct: 65 GGNVTMPCKNVAATLMDELSPAAKIIGAVNVVVND--DGKLIGHITDGIGFVRNLQE--- 119
Query: 351 ERQGINGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGARVI-IFNRN---YERAKAL 406
H I GK V++GAGGA A+ A GA+ I IFNR Y RA++
Sbjct: 120 ----------HGIDIKGKHLVVLGAGGAATAIQVQAALDGAKQITIFNRQDEFYSRAEST 169
Query: 407 AD-------AVSGEALHFEYLHEFFPE--KGMILANASAIGMEPNSDQSPVPKEALKAYE 457
A AV + + E IL NA+ +GM+P+ S V L+A
Sbjct: 170 AKKLAEAAPAVKVDVVQLENTDRLKAAIADADILVNATTVGMKPDDGISLVDPSFLRADL 229
Query: 458 LVFDAVYTPRNTRLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAP 506
+V D VY P T+L+ +A +VGA G M + Q ++L+TG P
Sbjct: 230 VVADTVYNPLKTKLIEDAEKVGAKTAPGKGMLLWQGAAGYQLWTGQDMP 278
>gi|448630583|ref|ZP_21673163.1| shikimate 5-dehydrogenase [Haloarcula vallismortis ATCC 29715]
gi|445755616|gb|EMA06999.1| shikimate 5-dehydrogenase [Haloarcula vallismortis ATCC 29715]
Length = 265
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 97/284 (34%), Positives = 132/284 (46%), Gaps = 23/284 (8%)
Query: 238 KIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPM--LVDDVKEFFRTYSGTDFAGFSVG 295
++GL+ NPVGHS P +H + + YV D +G +V
Sbjct: 2 DVYGLLGNPVGHSLSPPMHEAGYEALGLDARYVTFEPPADSGAAAIEAAETLGISGLNVT 61
Query: 296 IPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALRERQGI 355
IP K+ + + PLA+ IGAVNT+ GYNTD A+ A+
Sbjct: 62 IPFKQDVLDAVNPA-PLAERIGAVNTVDF--TGDTPTGYNTDAVGAVRALN--------- 109
Query: 356 NGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGARVIIFNRNYERAKALADAVSGEAL 415
H P++G V+ G RA+AFG G V + NR +A ALADAV
Sbjct: 110 ----HHEVPLSGTAVVVGAGGAG-RAVAFGLADEGLSVKVANRTESKAHALADAVPDATG 164
Query: 416 H-FEYLHEFFPEKGMILANASAIGMEPNSDQSPVPKEALKAYELVFDAVYTPRNTRLLRE 474
H + L + IL N +++GME D++PVP +AL V DAVYTP TRLL++
Sbjct: 165 HGLDSLPGLLADAD-ILVNCTSVGME--EDETPVPADALHGDLAVLDAVYTPIETRLLQD 221
Query: 475 AAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRKLVLEQF 518
AA GAT V G M + Q + F +TG AP D M + E
Sbjct: 222 AAAAGATTVDGAWMLLYQGVEAFERWTGQDAPVDSMNSQLREHL 265
>gi|334127717|ref|ZP_08501620.1| shikimate dehydrogenase [Centipeda periodontii DSM 2778]
gi|333388853|gb|EGK60023.1| shikimate dehydrogenase [Centipeda periodontii DSM 2778]
Length = 288
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 88/298 (29%), Positives = 145/298 (48%), Gaps = 23/298 (7%)
Query: 230 LEHINPDTKIFGLVSNPVGHSKGPILHNPAFRHTRFNGIY--VPMLVDDVKEFFRTYSGT 287
++ I TK+ G++ P+GHS PI+ N A R + +Y +P+ D +
Sbjct: 1 MQMITGKTKLLGVLGAPIGHSLSPIIQNEALRAAGLDYVYAALPVRADALTSAVHGLRDA 60
Query: 288 DFAGFSVGIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIED 347
AGF+V IP K + D++ A+ I AVNT++ +G+LVG+NTD ++
Sbjct: 61 GIAGFNVTIPFKTEIIPLMDDLSEDARRIHAVNTVVVEE-NGRLVGHNTDVTGFLA---- 115
Query: 348 ALRERQGINGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGARVIIFN-RNYERAKAL 406
G A +AGK VL+GAGGA RA+ +G G +++ R+ ++ AL
Sbjct: 116 ---------GFAERGIALAGKKAVLIGAGGAARAVLWGLLRSGVSLVVIGVRSAQKGAAL 166
Query: 407 ADAVSGEALHFEYLHE---FFPEKGM--ILANASAIGMEPN-SDQSPVPKEALKAYELVF 460
A + + Y + F G I+ + +GM P+ + PV A+K+ + +
Sbjct: 167 AADFAADGDVRAYAFDDPAFTSALGSADIIVQTTPLGMTPHVGEMPPVDVAAIKSSAVFY 226
Query: 461 DAVYTPRNTRLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRKLVLEQF 518
D +YTP TR LR AA G ++G M + Q F L+TG + M++++ E+
Sbjct: 227 DLIYTPAETRFLRAAAAHGHETINGETMLVAQGAEAFFLWTGVRPDMELMKRVLREEL 284
>gi|169831149|ref|YP_001717131.1| shikimate 5-dehydrogenase [Candidatus Desulforudis audaxviator
MP104C]
gi|169637993|gb|ACA59499.1| shikimate 5-dehydrogenase [Candidatus Desulforudis audaxviator
MP104C]
Length = 289
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 94/295 (31%), Positives = 139/295 (47%), Gaps = 29/295 (9%)
Query: 233 INPDTKIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYV--PMLVDDVKEFFRTYSGTDFA 290
I+ T++ L+ PV HS P + N AFR N +Y+ P+ + + + D
Sbjct: 2 IDASTRLVVLLGYPVHHSYSPAMQNAAFRAAGLNLVYLAAPVPPERLAPAVAAVAALDMP 61
Query: 291 GFSVGIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALR 350
G +V +PHKE A DEV P A+ +GAVNTI+ R +G+LVG+NTD + A+ +A
Sbjct: 62 GANVTVPHKERVPAFLDEVAPEARLLGAVNTIVHR--NGRLVGHNTDGTGFLRALREAGY 119
Query: 351 ERQGINGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGARVIIFNRNYERAKALADAV 410
+ +G V A + V + GA +++FNR +RA LA V
Sbjct: 120 DPRGEAVVVLGAGGAARAVAVTLALEGA------------KEIVVFNRTLDRAHQLAALV 167
Query: 411 ------SGEALHFEYLHEFFPE------KGMILANASAIGMEPN-SDQSPVPKEALKAYE 457
AL +E L PE + ++ +++GM P D PVP E + A
Sbjct: 168 RERGCGGAAALGWEALEGQTPEARAAFVRAGLVVQTTSLGMSPRLEDGPPVPPEWMSANH 227
Query: 458 LVFDAVYTPRNTRLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRK 512
L +D VY P +T LR A + GA G M + Q F L+TG AP M++
Sbjct: 228 LAYDLVYNPSDTAFLRMARKAGARTAGGAGMLLHQGAAAFELWTGRDAPLAAMKQ 282
>gi|392376053|ref|YP_003207886.1| shikimate dehydrogenase [Candidatus Methylomirabilis oxyfera]
gi|258593746|emb|CBE70087.1| Shikimate dehydrogenase [Candidatus Methylomirabilis oxyfera]
Length = 285
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 95/286 (33%), Positives = 149/286 (52%), Gaps = 28/286 (9%)
Query: 238 KIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLVDD--VKEFFRTYSGT-DFAGFSV 294
K+F L +PV HS P++ N A + +G+Y+P V + F + G +F G +V
Sbjct: 8 KLFILFGDPVAHSLSPVMQNAALQAAGIDGLYIPWRVQSAGLPAAFESLRGMENFGGANV 67
Query: 295 GIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALRERQG 354
+PHKE A A D + P A ++GAVNT++ R DG L+G NTD + ++ +
Sbjct: 68 TVPHKEQAFALVDTLTPEATAVGAVNTVVAR--DGHLLGANTDGLGFLRSLHEE------ 119
Query: 355 INGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGAR-VIIFNRNYERAKALADAV--- 410
++ P GK V++GAGGA RA+A+ GA ++I NR RA++LA+ V
Sbjct: 120 -----ANFLP-RGKPSVILGAGGAARAVAWSLAEAGAEPIVIVNRTAPRARSLAEFVYRN 173
Query: 411 -----SGEALHFEYLHEFFPEKGMILANASAIGMEPNSDQSPVPKEALKAYELVFDAVYT 465
+G A+ + + +++ N +++G+ P SD P+ L+ LV+D +Y
Sbjct: 174 IGTSTTGLAIDDPQMPAIVRDCALVV-NTTSVGLNP-SDPPPIDPNILQPRALVYDLIYR 231
Query: 466 PRNTRLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMR 511
P+ T LLREA G V+ G+ M + Q F L+TG E MR
Sbjct: 232 PQETALLREAKRRGCRVIGGLGMLLYQGALAFELWTGHKPSEAAMR 277
>gi|347548873|ref|YP_004855201.1| putative shikimate 5-dehydrogenase AroD [Listeria ivanovii subsp.
ivanovii PAM 55]
gi|346981944|emb|CBW85929.1| Putative shikimate 5-dehydrogenase (AroD) [Listeria ivanovii subsp.
ivanovii PAM 55]
Length = 273
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 80/284 (28%), Positives = 137/284 (48%), Gaps = 26/284 (9%)
Query: 242 LVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLV--DDVKEFFRTYSGTDFAGFSVGIPHK 299
++ NP+ HS P + N F+ + Y +L+ D + + + GF++ P K
Sbjct: 6 VIGNPIRHSLSPAMQNRIFQELGMDAEYNSVLIEEDAFETEIKKLMVSGIRGFNITTPFK 65
Query: 300 EPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALRERQGINGVA 359
E + DE+ PLA GAVNT++R+ +GK G+NTD + + +E+ I +
Sbjct: 66 ERILPFLDELEPLAADSGAVNTVLRK--EGKWYGFNTDGKGYLEGLEE-------IRSIT 116
Query: 360 SHTSPIAGKIFVLVGAGGAGRALAFGAKSR-GARVIIFNRNYERAKALADAVSGEALHFE 418
+ S ++ GAGGA +A+ K+ A++ I NR E+A + H+
Sbjct: 117 ENDS------ILITGAGGASKAIYLALKNHTNAKITIANRTSEKA---VEMTKNHDNHYA 167
Query: 419 YLHEFFPEKGM----ILANASAIGMEPNSDQSPVPKEALKAYELVFDAVYTPRNTRLLRE 474
E EK + I+ ++IG+E + ++SP+ L + D +Y P T L+E
Sbjct: 168 MTLEE-AEKNLANFTIIIQTTSIGLEASKNKSPISLSNLTKGTICSDIIYNPAETAFLKE 226
Query: 475 AAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRKLVLEQF 518
A + GA + +G+ MF+ Q F ++TG M++ VLEQ
Sbjct: 227 AKKNGAIIQNGLSMFVNQGALAFEIWTGVKPKRSLMKEAVLEQL 270
>gi|417985860|ref|ZP_12626442.1| shikimate/quinate 5-dehydrogenase I beta [Lactobacillus casei 32G]
gi|410527760|gb|EKQ02623.1| shikimate/quinate 5-dehydrogenase I beta [Lactobacillus casei 32G]
Length = 296
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 94/289 (32%), Positives = 137/289 (47%), Gaps = 30/289 (10%)
Query: 233 INPDTKIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLV--DDVKEFFRTYSGTDFA 290
I+ T + L+ +PVGHS P ++N +F+ + + YV V + + E
Sbjct: 5 ISGTTGLLCLLGSPVGHSGSPAMYNFSFQKQKIDAAYVAFDVTKEQMPEALNAMRLFKMR 64
Query: 291 GFSVGIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALR 350
G +V +P K A DE+ P AK IGAVN ++ DGKL+G+ TD + +++
Sbjct: 65 GGNVTMPCKNVAATLMDELSPAAKIIGAVNVVVND--DGKLIGHITDGIGFVRNLQE--- 119
Query: 351 ERQGINGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGARVI-IFNRN---YERA--- 403
H I GK V++GAGGA A+ A GA+ I IFNR Y RA
Sbjct: 120 ----------HGIDIKGKHLVVLGAGGAATAIQVQAALDGAKQITIFNRQDEFYSRAAST 169
Query: 404 -KALADAVSGEALHFEYLHEFFPEKGMI-----LANASAIGMEPNSDQSPVPKEALKAYE 457
K LA+A + L K I L NA+ +GM+P+ S V L+A
Sbjct: 170 AKKLAEAAPAVKVDVVQLENTDRLKAAIADADILVNATTVGMKPDDGISLVDPSFLRADL 229
Query: 458 LVFDAVYTPRNTRLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAP 506
+V D VY P T+L+ +A +VGA G M + Q ++L+TG P
Sbjct: 230 VVADTVYNPLKTKLIEDAEKVGAKTAPGKGMLLWQGAAGYQLWTGQDMP 278
>gi|392530088|ref|ZP_10277225.1| shikimate 5-dehydrogenase [Carnobacterium maltaromaticum ATCC
35586]
Length = 289
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 87/303 (28%), Positives = 144/303 (47%), Gaps = 32/303 (10%)
Query: 231 EHINPDTKIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLV--DDVKEFFRTYSGTD 288
E ++ T++ GL++ P+ HS P +HN AF + Y+ V D ++ +
Sbjct: 3 ERLSGHTELIGLMATPIRHSLSPTMHNEAFAKLGLDYAYLAFEVGTDQLENGIQAIRALG 62
Query: 289 FAGFSVGIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDA 348
G ++ +P+K+ D++ P+A+ +GAVNTI+ +G L G+ TD +
Sbjct: 63 MRGSNISMPNKQVVTKYLDKLSPVAEMVGAVNTIVND--NGILTGHITDGTGFM------ 114
Query: 349 LRERQGINGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGARVI-IFNR------NYE 401
G+ I G+ + GAGGA A+ A G + + IFNR N E
Sbjct: 115 -------RGLKQSDVSIIGEKMTICGAGGAATAICIQAALDGVKELSIFNRQDEFFKNAE 167
Query: 402 RAKALAD------AVSGEALHFEYLHEFFPEKGMILANASAIGMEPNSDQSPVPKEALKA 455
R AL + A + E L + E +I NA+ +GM+P ++S + +
Sbjct: 168 RTVALINEKTDCKATLYDLKDQESLRQQIAES-VIFTNATGVGMKPLQEESLITDPTMLR 226
Query: 456 YELVF-DAVYTPRNTRLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRKLV 514
ELV D VY P T+LL+ A E G V+G+ M + Q F ++TG P +++R+L+
Sbjct: 227 KELVVADVVYVPSETKLLKLAKEQGCKTVNGLGMMLWQGAAAFEMWTGQEMPVEYIRELL 286
Query: 515 LEQ 517
E+
Sbjct: 287 FEK 289
>gi|404482073|ref|ZP_11017301.1| shikimate 5-dehydrogenase [Clostridiales bacterium OBRC5-5]
gi|404344769|gb|EJZ71125.1| shikimate 5-dehydrogenase [Clostridiales bacterium OBRC5-5]
Length = 289
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 82/293 (27%), Positives = 138/293 (47%), Gaps = 30/293 (10%)
Query: 233 INPDTKIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLV-DDVKEFFRTYSGTDFAG 291
I+ DTK++G++ NPV HS PIL N + + Y V +++KE + D G
Sbjct: 2 ISADTKVYGIIGNPVSHSLSPILQNTLAKEMNIDMSYSAFHVTENIKEAIKGAFALDIKG 61
Query: 292 FSVGIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCES-AISAIEDALR 350
F+V IP+K+ + ++ AK IGA+NT+I+ K GYNTD +S ++L
Sbjct: 62 FNVTIPYKKDMLDIVSDIDDRAKKIGAINTLIKTENGYK--GYNTDIIGLGMSLYNNSL- 118
Query: 351 ERQGINGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGARVI-IFNRNYERAKALADA 409
I GK +++GAGGA +A+ + A G + I + NRN +AK L
Sbjct: 119 -------------SIKGKDIIILGAGGAAKAVLYLAIEEGVKSITLVNRNISKAKELKAE 165
Query: 410 VSGEALHFEYLHE------FFPEKGMILANASAIGMEPNSDQSPVPKEALKAYELV---F 460
V + + L + + + + +GM PN + + +EA YE
Sbjct: 166 VGIKDISVISLDDLKSNINLLDKDNYFVFQTTNVGMHPNVEDCIIEEEAF--YEKCNSGI 223
Query: 461 DAVYTPRNTRLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRKL 513
D +YTP T +++ G ++G++M I Q + F ++ +D + K+
Sbjct: 224 DLIYTPFETSFIKKMKSKGKICINGLDMLILQGVASFEIWNNIKVKKDTIEKV 276
>gi|425465635|ref|ZP_18844942.1| Shikimate dehydrogenase [Microcystis aeruginosa PCC 9809]
gi|389832082|emb|CCI24606.1| Shikimate dehydrogenase [Microcystis aeruginosa PCC 9809]
Length = 286
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 81/298 (27%), Positives = 144/298 (48%), Gaps = 27/298 (9%)
Query: 233 INPDTKIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLV--DDVKEFFRTYSGTDFA 290
IN TK+ G++ +P+GH+ P +HN A N +Y+P+ + +++ + D
Sbjct: 4 INGKTKLLGVIGDPIGHTLSPPMHNAAIDALGLNYVYLPLPIAPENLATAIAGLAAIDLE 63
Query: 291 GFSVGIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALR 350
GFSV IPHK + ++ A+ +GAVNT+ R + G NTD + ++ ++ +
Sbjct: 64 GFSVTIPHKLAIIPLLSQITEKARLVGAVNTVWRTETGWQ--GTNTDVDGFLAPLKSLDK 121
Query: 351 ERQGINGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRG-ARVIIFNRNYERAKALADA 409
+ +N V ++G GGA RA+ G + + RN ++ ++
Sbjct: 122 DWSRVNPV-------------ILGNGGAARAVVVACAQLGCGEIHVVGRNQKKLDPFKES 168
Query: 410 VSGEALH-FEYLHEFFPEKGMI-----LANASAIGMEPNSDQSPVPKEALKAYE---LVF 460
+ +L+ +H + +G++ L N++ IGM P +QSPV E L + +
Sbjct: 169 WANTSLYDLLEVHSWDELEGLVSTTELLINSTPIGMSPQGEQSPVELELLDLLPPSAIAY 228
Query: 461 DAVYTPRNTRLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRKLVLEQF 518
D +Y PR T+ LR A G ++ G+EM + Q ++ G P MR+ +L+QF
Sbjct: 229 DLIYNPRPTKFLRLARTRGIRIIDGLEMLVNQGAIALEIWLGQPVPVSVMREALLKQF 286
>gi|289435577|ref|YP_003465449.1| shikimate 5-dehydrogenase [Listeria seeligeri serovar 1/2b str.
SLCC3954]
gi|289171821|emb|CBH28367.1| shikimate 5-dehydrogenase, putative [Listeria seeligeri serovar
1/2b str. SLCC3954]
Length = 289
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 89/299 (29%), Positives = 142/299 (47%), Gaps = 31/299 (10%)
Query: 231 EHINPDTKIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVP--MLVDDVKEFFRTYSGTD 288
I+ T++ L+ PV HSK PI++N +F+ + Y+ + V V + +
Sbjct: 3 NRISGSTRLLSLIGTPVDHSKSPIMYNYSFQKAGLDYAYLAFDIPVTKVADAINAIKTFN 62
Query: 289 FAGFSVGIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDA 348
G +V +P K + D++ P A+ IGAVNTII DGKL G+ TD S + D+
Sbjct: 63 LRGSNVTMPCKSEVLKYMDDLSPAARMIGAVNTIINE--DGKLTGHITDGLGFASNLRDS 120
Query: 349 LRERQGINGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGARVI-IFNRN---YERAK 404
GV +AGK ++GAGGA A+ + GA+ I IFN Y++AK
Sbjct: 121 --------GVT-----VAGKKMTIIGAGGAATAIQVQSALDGAKEIAIFNIKDDFYQKAK 167
Query: 405 ALADAVSGEA-------LHFEYLHEFFPE--KGMILANASAIGMEPNSDQSPVPKEALKA 455
++ E + + E IL NA+ +GM P ++PV +
Sbjct: 168 QTVASIKQEVPNCIVRIYDLNDTEKLYAEIATSNILVNATLVGMHPYESETPVKDATVFH 227
Query: 456 YELVF-DAVYTPRNTRLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRKL 513
+L+ D VY P+ T+L+ +A G V G+ M + Q ++LFTG P + +++L
Sbjct: 228 KDLIVADVVYNPKKTKLMLDAEAAGCKTVGGLGMLLWQGAEAYKLFTGEDMPVEEVKEL 286
>gi|166030991|ref|ZP_02233820.1| hypothetical protein DORFOR_00672 [Dorea formicigenerans ATCC
27755]
gi|166029258|gb|EDR48015.1| shikimate dehydrogenase [Dorea formicigenerans ATCC 27755]
Length = 291
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 94/314 (29%), Positives = 140/314 (44%), Gaps = 53/314 (16%)
Query: 231 EHINPDTKIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLV--DDVKEFFRTYSGTD 288
+ I+ T + L+ +PVGHS P +HN +F + Y+ + D V EF
Sbjct: 3 KRISGTTTLLALIGSPVGHSGSPAMHNYSFEKLGLDYAYMAFEIKEDQVGEFLDAARLLK 62
Query: 289 FAGFSVGIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDA 348
GF+V +P K DE+ P A+ +GA NT++ +GKL+G+NTD + +
Sbjct: 63 IRGFNVTMPCKMEVARQVDELSPAAQIMGASNTVVNE--NGKLIGHNTDGVGFVKNL--- 117
Query: 349 LRERQGINGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGARVI-IFNR---NYERAK 404
A H + K L+G GGAG A+ GA I +FNR N+E+ +
Sbjct: 118 ----------AEHGVSVKDKTITLMGGGGAGTAIFVQLALDGASEIHVFNRKGANFEKLE 167
Query: 405 ALADAVSGEALHFEYLHEFFPE-------------------KGMILANASAIGMEPNSDQ 445
+A + EF PE + IL NA+ +GM+PN
Sbjct: 168 KIAKKIL----------EFAPECKIQVCDMADKKALYKSIGESDILVNATNVGMKPNEKG 217
Query: 446 SPVPKEALKAYELVF-DAVYTPRNTRLLREAAEVGAT-VVSGVEMFIRQALGQFRLFTGG 503
+ + ++ +LV + +Y P+ TR++REA E G VV G M + Q F LFTG
Sbjct: 218 TMIQDTSVYREDLVVAEIIYNPKETRMMREAKEAGVKCVVGGKGMLLWQGAEAFHLFTGQ 277
Query: 504 LAP-EDFMRKLVLE 516
P ED K E
Sbjct: 278 EMPVEDVKAKFFAE 291
>gi|295703111|ref|YP_003596186.1| shikimate 5-dehydrogenase [Bacillus megaterium DSM 319]
gi|294800770|gb|ADF37836.1| shikimate 5-dehydrogenase [Bacillus megaterium DSM 319]
Length = 298
Score = 119 bits (297), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 85/302 (28%), Positives = 143/302 (47%), Gaps = 33/302 (10%)
Query: 233 INPDTKIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLV--DDVKEFFRTYSGTDFA 290
IN T++ GL++ P+GHS P +HN AF+ N Y+ V D +++ + +
Sbjct: 7 INGKTQLIGLLATPIGHSLSPSMHNMAFKKLGLNYAYLAFEVGNDSLEDAIKGLRALNVK 66
Query: 291 GFSVGIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALR 350
GF+V +P+K + DE+ AK GAVNT++ +G LVG++TD I +++
Sbjct: 67 GFNVSMPNKTKILPFLDELADSAKFSGAVNTVVND--NGVLVGHSTDGMGYIRNLKE--- 121
Query: 351 ERQGINGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRG-ARVIIFNRN---YERAKAL 406
H I GK L+G+GGA +A A G + IF R+ Y +A
Sbjct: 122 ----------HGVDITGKKMTLIGSGGAATPIAIQAALEGLEELTIFARHDEFYSKAVEN 171
Query: 407 ADAVSGEALHFEYLHEFFP-----------EKGMILANASAIGMEPNSDQSPVPK-EALK 454
++ E H + + + IL N + +GM+P + S + L+
Sbjct: 172 VKIINEEMKHVSCKAKLYSLEDTDRLREEIKTSDILTNGTGVGMKPLEEFSIIEDISMLR 231
Query: 455 AYELVFDAVYTPRNTRLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRKLV 514
+V D VY P ++LL +A +G ++G+ M I Q F L+TG P +++++ +
Sbjct: 232 PDLIVTDVVYMPMRSKLLEQAESIGCHTINGIGMMIWQGAMAFELWTGKEMPVEYIKEQM 291
Query: 515 LE 516
E
Sbjct: 292 FE 293
>gi|404412569|ref|YP_006698156.1| shikimate 5-dehydrogenase [Listeria monocytogenes SLCC7179]
gi|404238268|emb|CBY59669.1| shikimate 5-dehydrogenase [Listeria monocytogenes SLCC7179]
Length = 291
Score = 119 bits (297), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 84/300 (28%), Positives = 145/300 (48%), Gaps = 30/300 (10%)
Query: 231 EHINPDTKIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLVDD--VKEFFRTYSGTD 288
E I T++ GL++ P+ HS P +HN AF + +Y+ V D +K+ + + +
Sbjct: 7 ERITGHTELIGLIATPIRHSLSPTMHNEAFAKLGLDYVYLAFEVGDKELKDVVQGFRAMN 66
Query: 289 FAGFSVGIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDA 348
G +V +P+K D++ P A+ +GAVNT++ DG L G+ TD + A+++A
Sbjct: 67 LRGCNVSMPNKTNIHKYLDKLSPAAELVGAVNTVVND--DGVLTGHITDGTGYMRALKEA 124
Query: 349 LRERQGINGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGARVI-IFNRN---YERAK 404
+ I GK + GAGGA A+ A G + I IFNR Y A+
Sbjct: 125 GHD-------------IIGKKMTICGAGGAATAICIQAALDGVKEISIFNRKDDFYANAE 171
Query: 405 ALADAVSGEA------LHFEYLHEFFPE--KGMILANASAIGMEPNSDQSPVPK-EALKA 455
+ ++ + E + E + +I NA+ +GM+P ++ +P + L+
Sbjct: 172 KTVEKINSKTDCKAQLFDIEDHEQLRKEIAESVIFTNATGVGMKPFEGETLLPNADMLRP 231
Query: 456 YELVFDAVYTPRNTRLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRKLVL 515
+V D VY P TRLL A E G ++G+ M + Q F ++T P D++++++
Sbjct: 232 ELIVSDVVYKPTKTRLLEIAEEQGCQTLNGLGMMLWQGAKAFEIWTHKEMPVDYIKEILF 291
>gi|417656004|ref|ZP_12305695.1| shikimate dehydrogenase [Staphylococcus epidermidis VCU028]
gi|418665234|ref|ZP_13226684.1| shikimate dehydrogenase [Staphylococcus epidermidis VCU081]
gi|420163035|ref|ZP_14669782.1| shikimate dehydrogenase [Staphylococcus epidermidis NIHLM095]
gi|420167992|ref|ZP_14674644.1| shikimate dehydrogenase [Staphylococcus epidermidis NIHLM087]
gi|329737254|gb|EGG73508.1| shikimate dehydrogenase [Staphylococcus epidermidis VCU028]
gi|374409209|gb|EHQ80009.1| shikimate dehydrogenase [Staphylococcus epidermidis VCU081]
gi|394234724|gb|EJD80298.1| shikimate dehydrogenase [Staphylococcus epidermidis NIHLM095]
gi|394238020|gb|EJD83506.1| shikimate dehydrogenase [Staphylococcus epidermidis NIHLM087]
Length = 269
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 84/285 (29%), Positives = 142/285 (49%), Gaps = 28/285 (9%)
Query: 240 FGLVSNPVGHSKGPILHNPAFRHTRFNGIY--VPMLVDDVKEFFRTYSGTDFAGFSVGIP 297
F ++ NP+ HS P++H+ F+ Y + + V+ ++ + S GF+V IP
Sbjct: 3 FAVIGNPISHSLSPLMHHANFQSLNLENTYEAINVPVNQFQDIKKIISEKSIDGFNVTIP 62
Query: 298 HKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALRERQGING 357
HKE + D+++ AKS+GAVNT++ + DGK +GYNTD + NG
Sbjct: 63 HKERIIPYLDDINEQAKSVGAVNTVLVK--DGKWIGYNTDGIGYV-------------NG 107
Query: 358 VASHTSPIAGKIFVLVGAGGAGRALAFG-AKSRGARVIIFNRNYERAKALADAVSGEAL- 415
+ I +++GAGGA + +A K + + NR R + ++ L
Sbjct: 108 LKQIYEGIEDAYILILGAGGASKGIANELYKIVRPTLTVANRTMSRFNNWSLNINKINLS 167
Query: 416 HFE-YLHEFFPEKGMILANASAIGMEPNSDQSPVPKEALKAYELVFDAVYTPRNTRLLRE 474
H E +L EF I+ N + GM N+D S + L ++ LV D VY P T +L+E
Sbjct: 168 HAESHLDEF-----DIIINTTPAGMNGNTD-SVISLNRLASHTLVSDIVYNPYKTPILKE 221
Query: 475 AAEVGATVVSGVEMFIRQALGQFRLFTGGLAPE-DFMRKLVLEQF 518
A + G + +G++MF+ Q F+++T L P+ M+ +V+ +
Sbjct: 222 AEQRGNPIYNGLDMFVHQGAESFKIWT-NLEPDIKAMKNIVIHKL 265
>gi|150005076|ref|YP_001299820.1| shikimate 5-dehydrogenase [Bacteroides vulgatus ATCC 8482]
gi|294778884|ref|ZP_06744300.1| putative shikimate 5-dehydrogenase [Bacteroides vulgatus PC510]
gi|319642584|ref|ZP_07997231.1| shikimate 5-dehydrogenase [Bacteroides sp. 3_1_40A]
gi|345520174|ref|ZP_08799574.1| shikimate 5-dehydrogenase [Bacteroides sp. 4_3_47FAA]
gi|423311983|ref|ZP_17289920.1| shikimate 5-dehydrogenase [Bacteroides vulgatus CL09T03C04]
gi|149933500|gb|ABR40198.1| shikimate 5-dehydrogenase [Bacteroides vulgatus ATCC 8482]
gi|254836003|gb|EET16312.1| shikimate 5-dehydrogenase [Bacteroides sp. 4_3_47FAA]
gi|294447193|gb|EFG15777.1| putative shikimate 5-dehydrogenase [Bacteroides vulgatus PC510]
gi|317385818|gb|EFV66750.1| shikimate 5-dehydrogenase [Bacteroides sp. 3_1_40A]
gi|392689362|gb|EIY82640.1| shikimate 5-dehydrogenase [Bacteroides vulgatus CL09T03C04]
Length = 246
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 76/268 (28%), Positives = 127/268 (47%), Gaps = 28/268 (10%)
Query: 238 KIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLVDDVKEFFRTY-SGTDFAGFSVGI 296
K +GL+ P+GHS N F + YV + +KE + D G +V I
Sbjct: 2 KKYGLIGYPLGHSFSKNFFNEKFHSENIDAEYVNFEIPSIKELPSVLLANPDLVGLNVTI 61
Query: 297 PHKEPAVACCDEVHPLAKSIGAVNTI--IRRPIDGKLVGYNTDCESAISAIEDALRERQG 354
P+KE ++ DE+ A +IGAVN I +R+ +L+GYN+D +IE L +
Sbjct: 62 PYKEQVISYLDELDKDAAAIGAVNVIKIVRQKGKTRLIGYNSDVIGFTQSIEPLLEPQH- 120
Query: 355 INGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGARVIIFNRNYERAKALADAVSGEA 414
K +++G GGA +A+A+G K G +RN D ++ E
Sbjct: 121 -------------KKALILGTGGASKAIAYGLKKLGLECKFVSRNLREEMLTYDQLTPEI 167
Query: 415 LHFEYLHEFFPEKGMILANASAIGMEPNSDQSP-VPKEALKAYELVFDAVYTPRNTRLLR 473
+ EY ++ N + +GM P +D+ P +P + L L++D +Y P T ++
Sbjct: 168 MD-EY---------KVVVNCTPVGMYPRADEYPNIPYQYLTPNHLLYDLLYNPDTTLFMK 217
Query: 474 EAAEVGATVVSGVEMFIRQALGQFRLFT 501
+ A+ GA +G+EM + QA G + ++
Sbjct: 218 KGADKGAITKNGLEMLLLQAFGAWDIWN 245
>gi|239629520|ref|ZP_04672551.1| shikimate 5-dehydrogenase [Lactobacillus paracasei subsp. paracasei
8700:2]
gi|417979851|ref|ZP_12620539.1| shikimate/quinate 5-dehydrogenase I beta [Lactobacillus casei 12A]
gi|417982687|ref|ZP_12623338.1| shikimate/quinate 5-dehydrogenase I beta [Lactobacillus casei 21/1]
gi|239528206|gb|EEQ67207.1| shikimate 5-dehydrogenase [Lactobacillus paracasei subsp. paracasei
8700:2]
gi|410526640|gb|EKQ01524.1| shikimate/quinate 5-dehydrogenase I beta [Lactobacillus casei 12A]
gi|410529461|gb|EKQ04269.1| shikimate/quinate 5-dehydrogenase I beta [Lactobacillus casei 21/1]
Length = 298
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 91/289 (31%), Positives = 137/289 (47%), Gaps = 30/289 (10%)
Query: 233 INPDTKIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLV--DDVKEFFRTYSGTDFA 290
I+ T + L+ +PVGHS P ++N +F+ + + YV V + + E
Sbjct: 5 ISGTTGLLCLLGSPVGHSGSPAMYNFSFQKQKIDAAYVAFDVTKEQMPEALNAMRLFKMR 64
Query: 291 GFSVGIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALR 350
G +V +P K A DE+ P AK IGAVN ++ DGKL+G+ TD + +++
Sbjct: 65 GGNVTMPCKNVAATLMDELSPAAKIIGAVNVVVND--DGKLIGHITDGIGFVRNLQE--- 119
Query: 351 ERQGINGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGARVI-IFNRN---YERAKAL 406
H + GK V++GAGGA A+ A GA+ I IFNR Y RA++
Sbjct: 120 ----------HGIDVKGKHLVVLGAGGAATAIQVQAALDGAKQITIFNRQDEFYSRAEST 169
Query: 407 AD-------AVSGEALHFEYLHEFFPE--KGMILANASAIGMEPNSDQSPVPKEALKAYE 457
A AV + + E IL NA+ +GM+P+ S V L+A
Sbjct: 170 AKKLAEAAPAVKVDVVQLENTDRLKAAIADADILVNATTVGMKPDDGVSLVDPSFLRADL 229
Query: 458 LVFDAVYTPRNTRLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAP 506
+V D VY P T+L+ +A +VGA G M + Q ++L+TG P
Sbjct: 230 VVADTVYNPLKTKLIEDAEKVGAKTAPGKGMLLWQGAAGYQLWTGQDMP 278
>gi|42527148|ref|NP_972246.1| 3-dehydroquinate dehydratase [Treponema denticola ATCC 35405]
gi|449111792|ref|ZP_21748361.1| shikimate 5-dehydrogenase [Treponema denticola ATCC 33521]
gi|449113401|ref|ZP_21749906.1| shikimate 5-dehydrogenase [Treponema denticola ATCC 35404]
gi|41817572|gb|AAS12157.1| 3-dehydroquinate dehydratase, type 1, putative/shikimate
5-dehydrogenase, putative [Treponema denticola ATCC
35405]
gi|448957063|gb|EMB37816.1| shikimate 5-dehydrogenase [Treponema denticola ATCC 33521]
gi|448959611|gb|EMB40330.1| shikimate 5-dehydrogenase [Treponema denticola ATCC 35404]
Length = 493
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 127/517 (24%), Positives = 217/517 (41%), Gaps = 51/517 (9%)
Query: 8 SLLVCTQLECETTEEMQASIEQAKVEGADLVELCIDSMEFSHISEVDKLIQHPTLPAIVS 67
S VC L +T E+ +++E+ K + D+ EL +D + S I + + +P I++
Sbjct: 2 STKVCLVLTEKTIEKNLSALEKYK-KFIDIAELRVDYLNQSEILYLRNFPERAGIPCILT 60
Query: 68 YRLKSS--RKSSDEACKNTCLQVLRRAL-----DLDVEFVEMDYEVASDPLMSEIIYSRS 120
R KS + E + T + R L D F +D E D E
Sbjct: 61 VRRKSDGGNFTGGEGARMT---IFARGLAFANADPIKNFSYIDLESDFDSSGIEEAARAF 117
Query: 121 NTKIIVSSYLNGGGKPTTEKLGDVIACMQATGADVMKLEIAVDSITDLAPVFE--MLTHC 178
+ KII S + K + + + + D+ KL + + D++ +F+ L
Sbjct: 118 DIKIIRSLH----SKVPVKNIVKTVEGLSRFETDIPKLAFTANCLNDVSELFKASKLIKN 173
Query: 179 QVPLIALAVGSRGLISQLLGPKFGGFLVYGSL-----GGKSVPGLPTLVSLKQVYQLEHI 233
Q ++++ +G GL S++L K +VY K L +L+++Y I
Sbjct: 174 QEYILSV-MGPYGLSSRILSNKLNSQIVYTFTPEYIKKNKLEQELIDPETLEELYGFSKI 232
Query: 234 NPDTKIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLVDDVKEFFRTYSGTDFAGFS 293
+ +T ++G++ V S P +HN F+ N +Y+P+ KE + G S
Sbjct: 233 DEETSLYGVIGKDVNTSLSPQIHNKGFKRKNLNSVYIPISAVSSKEALDFANLLKIKGLS 292
Query: 294 VGIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALRE-- 351
V P K + + + +K IGAVNT++ + K GYNTD + A+ + L E
Sbjct: 293 VTAPFKSEIIPLINSISEASKFIGAVNTLVSE--NKKWFGYNTDVDGFQQALMEFLNEKD 350
Query: 352 -RQGINGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGARVIIFNRNYERAKALADAV 410
R+ + V+ G + IFNR E+AK +A+
Sbjct: 351 LRKYKVAIIGAGGAARAVAEVISSLHG--------------KACIFNRTAEKAKNIAEKY 396
Query: 411 SGEA-----LHFEYLHEFFPEKGMILANASAIGMEPNSDQSPVPKEALKAYELVFDAVYT 465
+ ++ + LH F +I+ +A GMEP+ P+ E VF+ +Y
Sbjct: 397 KFKWALLDPINIKQLHAF---SELIIQTTNA-GMEPDIYMDPLNFYTFTGKEKVFELIYR 452
Query: 466 PRNTRLLREAAEVGATVVSGVEMFIRQALGQFRLFTG 502
P T++L+ A G V +G +M QA QF+ F G
Sbjct: 453 PETTKMLKRARTAGCQVCNGYKMLEYQAYHQFKAFAG 489
>gi|289434770|ref|YP_003464642.1| hypothetical protein lse_1405 [Listeria seeligeri serovar 1/2b str.
SLCC3954]
gi|289171014|emb|CBH27556.1| aroE-2 [Listeria seeligeri serovar 1/2b str. SLCC3954]
Length = 291
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 82/285 (28%), Positives = 135/285 (47%), Gaps = 28/285 (9%)
Query: 242 LVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLVDD--VKEFFRTYSGTDFAGFSVGIPHK 299
++ NP+ HS P + N F+ Y +L+++ + + + GF++ P K
Sbjct: 24 VIGNPIRHSLSPAMQNRIFQELGMEAEYNSVLIEENAFETEIKKLMDSGIRGFNITTPFK 83
Query: 300 EPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALRERQGINGVA 359
E + DE+ PLA GAVNT++R+ D K G+NTD + + +E+
Sbjct: 84 ERILPFLDELEPLAADSGAVNTVLRK--DDKWYGFNTDGKGYLEGLEE------------ 129
Query: 360 SHTSPIAGKIFVLV-GAGGAGRALAFGAKSR-GARVIIFNRNYERAKALADAVSGEALHF 417
PI K +L+ GAGGA +A+ K+ AR+ + NR +A + + H
Sbjct: 130 --IRPITEKDSILITGAGGASKAIYLALKNHTNARITVANRTANKAVEMTK--DNDNHHA 185
Query: 418 EYLHEFFPEKGM----ILANASAIGMEPNSDQSPVPKEALKAYELVFDAVYTPRNTRLLR 473
L E EK + I+ ++IG+E + + SP+ L + D +Y P T L+
Sbjct: 186 MTLQE--AEKNLADFTIIIQTTSIGLEASKNTSPISLTNLTKGTICSDIIYNPAETAFLK 243
Query: 474 EAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRKLVLEQF 518
EA E GA + +G+ MF+ Q F ++TG M++ VLEQ
Sbjct: 244 EAKENGAIIQNGLPMFVNQGALAFEIWTGVKPERTLMKEAVLEQL 288
>gi|398849576|ref|ZP_10606310.1| shikimate 5-dehydrogenase [Pseudomonas sp. GM80]
gi|398250644|gb|EJN35952.1| shikimate 5-dehydrogenase [Pseudomonas sp. GM80]
Length = 271
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 81/265 (30%), Positives = 132/265 (49%), Gaps = 22/265 (8%)
Query: 255 LHNPAFRHTRFNGIYVPMLVDDVKEFFRTYSGTDFAGFSVGIPHKEPAVACCDEVHPLAK 314
+HN A+ + +V V+D G +V +P+K ++C D++ A+
Sbjct: 23 IHNAAYAALGLDYTFVCFGVEDPVAAVAAIRALGVRGMNVSMPYKTAVMSCLDKIDESAQ 82
Query: 315 SIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALRERQGINGVASHTSPIAGKIFVLVG 374
IGAVNTI ++G L GYNTD A+ A+++ + ++GK ++G
Sbjct: 83 VIGAVNTI--NNVEGVLTGYNTDYLGAVRALQE--------------VTELSGKRIAVIG 126
Query: 375 AGGAGRALAFGAKSRGARVIIFNRNYERAKALADAVSGEALHFEYLHEFFPEKGMILANA 434
AGGA RA+ +G A V +FNR+ ER ALA+ + A + F I+ NA
Sbjct: 127 AGGAARAVVYGCLQAAAEVTVFNRSIERGAALAEDLG--ARWGGNVGAFAATSFDIVINA 184
Query: 435 SAIGM-EPNSDQSPVPKEALKAYELVFDAVYTPRNTRLLREAAEVGATVVSGVEMFIRQA 493
+++G +P S+ P+ L ++ +V D + P T LL +A +G V+G M + QA
Sbjct: 185 TSVGFKQPESN--PL-DGVLASHLIVMDVAFMPVQTALLLQAKTLGCRTVAGTRMLVHQA 241
Query: 494 LGQFRLFTGGLAPEDFMRKLVLEQF 518
Q L+TG AP D M + +L++
Sbjct: 242 CRQIELYTGRDAPIDIMEQAMLKEI 266
>gi|422422214|ref|ZP_16499167.1| shikimate 5-dehydrogenase [Listeria seeligeri FSL S4-171]
gi|313637775|gb|EFS03128.1| shikimate 5-dehydrogenase [Listeria seeligeri FSL S4-171]
Length = 273
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 82/285 (28%), Positives = 135/285 (47%), Gaps = 28/285 (9%)
Query: 242 LVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLVDD--VKEFFRTYSGTDFAGFSVGIPHK 299
++ NP+ HS P + N F+ Y +L+++ + + + GF++ P K
Sbjct: 6 VIGNPIRHSLSPAMQNRIFQELGMEAEYNSVLIEENAFETEIKKLMDSGIRGFNITTPFK 65
Query: 300 EPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALRERQGINGVA 359
E + DE+ PLA GAVNT++R+ D K G+NTD + + +E+
Sbjct: 66 ERILPFLDELEPLAADSGAVNTVLRK--DDKWYGFNTDGKGYLEGLEE------------ 111
Query: 360 SHTSPIAGKIFVLV-GAGGAGRALAFGAKSR-GARVIIFNRNYERAKALADAVSGEALHF 417
PI K +L+ GAGGA +A+ K+ AR+ + NR +A + + H
Sbjct: 112 --IRPITEKDSILITGAGGASKAIYLALKNHTNARITVANRTANKAVEMTK--DNDNHHA 167
Query: 418 EYLHEFFPEKGM----ILANASAIGMEPNSDQSPVPKEALKAYELVFDAVYTPRNTRLLR 473
L E EK + I+ ++IG+E + + SP+ L + D +Y P T L+
Sbjct: 168 MTLQE--AEKNLADFTIIIQTTSIGLEASKNTSPISLTNLTKGTICSDIIYNPAETAFLK 225
Query: 474 EAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRKLVLEQF 518
EA E GA + +G+ MF+ Q F ++TG M++ VLEQ
Sbjct: 226 EAKENGAIIQNGLPMFVNQGALAFEIWTGVKPERTLMKEAVLEQL 270
>gi|384452778|ref|YP_005665375.1| shikimate 5-dehydrogenase [Chlamydophila psittaci 08DC60]
gi|334695467|gb|AEG88683.1| shikimate 5-dehydrogenase [Chlamydophila psittaci 08DC60]
Length = 477
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 108/412 (26%), Positives = 183/412 (44%), Gaps = 40/412 (9%)
Query: 94 DLDVEFVEMDYEVASDPLMSEIIYSRSNTKIIVSSYLNGGGKPTTEKLGDVIACMQATGA 153
+L E++++D + + L ++I + N KII+S + + T+E + ++ M A
Sbjct: 77 ELQPEYLDIDKDFPKEAL-AKIQKNYPNIKIILSYHSD-----TSEHIPNLCNEMLRRQA 130
Query: 154 DVMKLEIAVDSITDLAPVFEMLTHCQVPLIALAVGSRGLISQLLGPKFGGFLVYGS--LG 211
K+ I D ++ H L +G+ G+ S++L P + Y S
Sbjct: 131 HHYKIAITSTKSIDTLRCIQIKKHLPENTTLLCMGNAGIASRILSPLMKNAINYASGINA 190
Query: 212 GKSVPGLPTLVSLKQVYQLEHINPDTKIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVP 271
K V G ++ L Y +++ +++I+GL+ NPV S + HN F + N Y+
Sbjct: 191 PKVVQGQLSIEDL-LAYNYTNLSSESRIYGLIGNPVDRSISHLSHNKLFSELQLNMSYIK 249
Query: 272 MLVD--DVKEFFRTYSGTDFAGFSVGIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDG 329
+L+ ++ EFF F G SV +P K + D + P + + NT++ R D
Sbjct: 250 ILLTPYELNEFFSLTRDLPFGGLSVTMPFKTDVLEYIDILDPSVQQCQSCNTLVFR--DN 307
Query: 330 KLVGYNTDCESAISAIEDALRERQGINGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSR 389
K+ GYNTD ++ L +R+ I H +VG+GGA +A+A
Sbjct: 308 KIAGYNTDGLGLLN-----LLKRKNILLQNKHVG--------IVGSGGAAKAIATTFADS 354
Query: 390 GARVIIFNRNYERAKALADAVSGEALHFEYLHEFFPEKGMILANASAIGMEPNSDQSPVP 449
GA++ IFNR A+ L+ G+A L E +IL P
Sbjct: 355 GAQISIFNRTKTHAEKLSVLCHGQAFPLNALSENHNIDILILC-------------LPPD 401
Query: 450 KEALKAY-ELVFDAVYTPRNTRLLREAAEVGATVVSGVEMFIRQALGQFRLF 500
E + Y ++ D P+ + ++A E G ++ G EMF QAL QF L+
Sbjct: 402 VEIPEIYPPVIIDINTLPKESLYTKKAKERGCQILYGYEMFAEQALLQFSLW 453
>gi|240144474|ref|ZP_04743075.1| shikimate dehydrogenase [Roseburia intestinalis L1-82]
gi|257203508|gb|EEV01793.1| shikimate dehydrogenase [Roseburia intestinalis L1-82]
gi|291535683|emb|CBL08795.1| shikimate dehydrogenase [Roseburia intestinalis M50/1]
gi|291540954|emb|CBL14065.1| shikimate dehydrogenase [Roseburia intestinalis XB6B4]
Length = 289
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 92/291 (31%), Positives = 136/291 (46%), Gaps = 15/291 (5%)
Query: 231 EHINPDTKIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLV--DDVKEFFRTYSGTD 288
+ I+ T + L+ +PVGHS P ++N +F + YV + D VK+ +
Sbjct: 3 KRISGHTGLLALIGSPVGHSGSPAMYNYSFEKLGLDYAYVAFDIKEDKVKDAIAAMKTFN 62
Query: 289 FAGFSVGIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDA 348
G +V +P K A DE+ P A+ IGAVNTI+ +GKL G+ TD E + + D
Sbjct: 63 MRGCNVTMPDKVEAAKYMDELSPAAQIIGAVNTIVND--NGKLTGHITDGEGFVHNLRDH 120
Query: 349 LRERQGINGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGARVIIFNRNYERAKALAD 408
E +G + A I V GA F K F R + A+ +
Sbjct: 121 GIEIKGKKITVAGGGGAATAIQVQCALDGAREISIFNIKDA-----FFERTLQTAEKIKK 175
Query: 409 AVSGEALHFEYLHEFFP-----EKGMILANASAIGMEPNSDQSPVPK-EALKAYELVFDA 462
AV ++ + + + I ANA+ +GM+P DQS V A + +V DA
Sbjct: 176 AVPECVVNVYDIADTAKMTEEIQSSDIFANATIVGMKPMDDQSVVKDLSAFRPGLVVADA 235
Query: 463 VYTPRNTRLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRKL 513
VY P T+LLREA E G T V G M + Q + F+L+TG P + ++KL
Sbjct: 236 VYNPEETKLLREAKEAGCTCVGGKGMLLWQGVAAFKLYTGQDMPVEDVKKL 286
>gi|392960610|ref|ZP_10326077.1| Shikimate dehydrogenase [Pelosinus fermentans DSM 17108]
gi|421054632|ref|ZP_15517598.1| shikimate 5-dehydrogenase [Pelosinus fermentans B4]
gi|421058184|ref|ZP_15520904.1| Shikimate dehydrogenase [Pelosinus fermentans B3]
gi|421067306|ref|ZP_15528799.1| Shikimate dehydrogenase [Pelosinus fermentans A12]
gi|421071495|ref|ZP_15532612.1| Shikimate dehydrogenase [Pelosinus fermentans A11]
gi|392440621|gb|EIW18294.1| shikimate 5-dehydrogenase [Pelosinus fermentans B4]
gi|392447014|gb|EIW24280.1| Shikimate dehydrogenase [Pelosinus fermentans A11]
gi|392449968|gb|EIW27032.1| Shikimate dehydrogenase [Pelosinus fermentans A12]
gi|392454854|gb|EIW31668.1| Shikimate dehydrogenase [Pelosinus fermentans DSM 17108]
gi|392461302|gb|EIW37514.1| Shikimate dehydrogenase [Pelosinus fermentans B3]
Length = 281
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 93/293 (31%), Positives = 149/293 (50%), Gaps = 24/293 (8%)
Query: 233 INPDTKIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLV--DDVKEFFRTYSGTDFA 290
I TK G++ P+GHS PI+HN AF+ + +Y+P+ V +++ + +F
Sbjct: 2 ITSKTKKIGILGWPLGHSLSPIMHNAAFKSLHLDYVYIPLPVHPENLAQAVAGLKAMEFT 61
Query: 291 GFSVGIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALR 350
G +V IPHK ++ DE+ A+ +GAVNT++ + DGK +GYNTD + + +I
Sbjct: 62 GVNVTIPHKVEIMSYLDEIDFSAQLVGAVNTVVIK--DGKTIGYNTDAQGFVQSILS--- 116
Query: 351 ERQGINGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGAR-VIIFNRNYERAKALADA 409
NG+ I + +++GAGGA RA+A G G + +II RN E+A+
Sbjct: 117 -----NGIK-----ITEQTAIILGAGGAARAVACGLFQNGIKNIIIGARNLEKAQQFVKL 166
Query: 410 VSG--EALHFEYLHEFFP---EKGMILANASAIGME-PNSDQSPVPKEALKAYELVFDAV 463
S + F++ F ++ IL N++ IGM +++ P+P E L V D +
Sbjct: 167 FSTNVDIQAFDWEDSGFQNLLQECDILINSTPIGMSVHDTEVLPIPWETLNPEAAVCDLI 226
Query: 464 YTPRNTRLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRKLVLE 516
Y P T+LL A E G ++G+ M I Q F L+T P M + + E
Sbjct: 227 YNPSKTQLLLSAEEHGHIAINGLGMLIEQGALAFELWTSEQGPRQIMSEALTE 279
>gi|402312231|ref|ZP_10831161.1| shikimate dehydrogenase [Lachnospiraceae bacterium ICM7]
gi|400370892|gb|EJP23874.1| shikimate dehydrogenase [Lachnospiraceae bacterium ICM7]
Length = 289
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 82/293 (27%), Positives = 138/293 (47%), Gaps = 30/293 (10%)
Query: 233 INPDTKIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLV-DDVKEFFRTYSGTDFAG 291
I+ DTK++G++ NPV HS PIL N + + Y V +++KE + D G
Sbjct: 2 ISADTKVYGIIGNPVSHSLSPILQNTLAKEMNIDMSYSAFHVTENIKEAIKGAFALDIKG 61
Query: 292 FSVGIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCES-AISAIEDALR 350
F+V IP+K+ + ++ AK IGA+NT+I+ K GYNTD +S ++L
Sbjct: 62 FNVTIPYKKDMLDIVSDIDERAKKIGAINTLIKTEKGYK--GYNTDIIGLGMSLYNNSL- 118
Query: 351 ERQGINGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGARVI-IFNRNYERAKALADA 409
I GK +++GAGGA +A+ + A G + I + NRN +AK L
Sbjct: 119 -------------SIKGKDIIILGAGGAAKAVLYLAIEEGVKSITLVNRNISKAKELRAE 165
Query: 410 VSGEALHFEYLHE------FFPEKGMILANASAIGMEPNSDQSPVPKEALKAYELV---F 460
V + + L + + + + +GM PN + + +EA YE
Sbjct: 166 VGIKDISVISLDDLKSNINLLDKDNYFVFQTTNVGMHPNVEDCIIEEEAF--YEKCNSGI 223
Query: 461 DAVYTPRNTRLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRKL 513
D +YTP T +++ G ++G++M I Q + F ++ +D + K+
Sbjct: 224 DLIYTPFETTFIKKMKSKGKICINGLDMLILQGVASFEIWNNIKVKKDTIEKV 276
>gi|398830722|ref|ZP_10588903.1| shikimate 5-dehydrogenase [Phyllobacterium sp. YR531]
gi|398213302|gb|EJM99895.1| shikimate 5-dehydrogenase [Phyllobacterium sp. YR531]
Length = 278
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 93/277 (33%), Positives = 137/277 (49%), Gaps = 24/277 (8%)
Query: 246 PVGHSKGPILHNPAFRHTRFNGIY--VPMLVDDVKEFFRTYSGTDFAGFSVGIPHKEPAV 303
P+ HS+ P++H + G Y V + +D +F T + G +V IPHKE A
Sbjct: 10 PIKHSRSPLIHGHWLKKYGLEGSYGAVEVAPEDFNDFVSTLQQNGYVGGNVTIPHKEMAF 69
Query: 304 ACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALRERQGINGVASHTS 363
A C + P A+ IGAVNT+ +G+L G NTD ++ ++ AS
Sbjct: 70 ALCQKRDPAAEEIGAVNTLWFE--NGQLRGGNTDAYGFLANLD------------ASSPK 115
Query: 364 PIAGKIFVLVGAGGAGRALAFGAKSRGARVI-IFNRNYERAKALADAV-SGEALH-FEYL 420
K +++GAGGA RA+ + K RG I I NR RAK LAD SG + H + L
Sbjct: 116 WDTHKTALVLGAGGASRAIIYALKQRGLTDIRIVNRTPARAKELADRFGSGISAHEWAAL 175
Query: 421 HEFFPEKGMILANASAIGMEPNSDQSPVPKEALKAYELVFDAVYTPRNTRLLREAAEVGA 480
E + +I+ N +++GME + + +K+ LV D VY P T LL+ A E G
Sbjct: 176 PELLDDASLIV-NTTSLGME-GKESLAIDLSNVKSDSLVTDIVYVPLETPLLKAAREAGL 233
Query: 481 TVVSGVEMFIRQALGQFRLFTGGLAPE--DFMRKLVL 515
V G+ M + QA+ F + G+ PE +R L+L
Sbjct: 234 KTVDGLGMLLHQAVPGFEYWF-GMRPEVTSELRDLIL 269
>gi|422419863|ref|ZP_16496818.1| shikimate dehydrogenase [Listeria seeligeri FSL N1-067]
gi|422422950|ref|ZP_16499903.1| shikimate dehydrogenase [Listeria seeligeri FSL S4-171]
gi|313632237|gb|EFR99299.1| shikimate dehydrogenase [Listeria seeligeri FSL N1-067]
gi|313636739|gb|EFS02399.1| shikimate dehydrogenase [Listeria seeligeri FSL S4-171]
Length = 289
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 89/299 (29%), Positives = 141/299 (47%), Gaps = 31/299 (10%)
Query: 231 EHINPDTKIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVP--MLVDDVKEFFRTYSGTD 288
I+ T++ L+ PV HSK PI++N +F+ + Y+ + V V + +
Sbjct: 3 NRISGSTRLLSLIGTPVDHSKSPIMYNYSFQKAGLDYAYLAFDIPVTKVADAINAIKTFN 62
Query: 289 FAGFSVGIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDA 348
G +V +P K + D++ P A+ IGAVNTII DGKL G+ TD S + D+
Sbjct: 63 LRGSNVTMPCKSEVLKYMDDLSPAARMIGAVNTIINE--DGKLTGHITDGLGFASNLRDS 120
Query: 349 LRERQGINGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGARVI-IFNRN---YERAK 404
GV +AGK ++GAGGA A+ + GA+ I IFN Y++AK
Sbjct: 121 --------GVT-----VAGKKMTIIGAGGAATAIQVQSALDGAKEIAIFNIKDDFYQKAK 167
Query: 405 ALADAVSGEA-------LHFEYLHEFFPEKGM--ILANASAIGMEPNSDQSPVPKEALKA 455
++ E + + E IL NA+ +GM P ++PV +
Sbjct: 168 QTVASIKQEVPNCIVQIYDLNDTEKLYAEIATSDILVNATLVGMHPYESKTPVKDATIFH 227
Query: 456 YELVF-DAVYTPRNTRLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRKL 513
L+ D VY P+ T+L+ +A G V G+ M + Q ++LFTG P + +++L
Sbjct: 228 KNLIVADVVYNPKKTKLMLDAEAAGCKTVGGLGMLLWQGAEAYKLFTGEDMPVEEVKEL 286
>gi|416125333|ref|ZP_11595931.1| shikimate dehydrogenase [Staphylococcus epidermidis FRI909]
gi|420199837|ref|ZP_14705507.1| shikimate dehydrogenase [Staphylococcus epidermidis NIHLM031]
gi|319400930|gb|EFV89149.1| shikimate dehydrogenase [Staphylococcus epidermidis FRI909]
gi|394271244|gb|EJE15740.1| shikimate dehydrogenase [Staphylococcus epidermidis NIHLM031]
Length = 269
Score = 119 bits (297), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 87/287 (30%), Positives = 144/287 (50%), Gaps = 32/287 (11%)
Query: 240 FGLVSNPVGHSKGPILHNPAFR----HTRFNGIYVPMLVDDVKEFFRTYSGTDFAGFSVG 295
F ++ NP+ HS P++H+ F+ + + I VP V+ ++ + S GF+V
Sbjct: 3 FAVIGNPISHSLSPLMHHANFQSLNLESTYEAINVP--VNQFQDIKKIISEKSIDGFNVT 60
Query: 296 IPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALRERQGI 355
IPHKE + D+++ AKS+GAVNT++ + DGK +GYNTD +
Sbjct: 61 IPHKERIIPYLDDINEQAKSVGAVNTVLVK--DGKWIGYNTDGIGYV------------- 105
Query: 356 NGVASHTSPIAGKIFVLVGAGGAGRALAFGA-KSRGARVIIFNRNYERAKALADAVSGEA 414
NG+ I +++GAGGA + +A K + + NR R + ++
Sbjct: 106 NGLKQIYEGIEDAYILILGAGGASKGIANELYKIVRPTLTVANRTMSRFNNWSLNINKIN 165
Query: 415 L-HFE-YLHEFFPEKGMILANASAIGMEPNSDQSPVPKEALKAYELVFDAVYTPRNTRLL 472
L H E +L EF I+ N + GM N D S + L ++ LV D VY P T +L
Sbjct: 166 LSHAERHLDEF-----DIIINTTPAGMNGNKD-SVISLNRLASHTLVSDIVYNPYKTPIL 219
Query: 473 REAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPE-DFMRKLVLEQF 518
EA + G + +G++MF+ Q F+++T L P+ + M+K+V+ +
Sbjct: 220 IEAEQKGNPIYNGLDMFVHQGAESFKIWT-NLEPDIEAMKKVVIHEL 265
>gi|148243617|ref|YP_001228774.1| shikimate dehydrogenase [Synechococcus sp. RCC307]
gi|147851927|emb|CAK29421.1| Shikimate dehydrogenase [Synechococcus sp. RCC307]
Length = 298
Score = 118 bits (296), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 84/282 (29%), Positives = 133/282 (47%), Gaps = 29/282 (10%)
Query: 233 INPDTKIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLV--DDVKEFFRTYSGTDFA 290
IN T++ G++ P+ HS P++HN A N Y+ V D +++ +
Sbjct: 9 INASTELLGVIGQPIHHSLSPVMHNAAIAELGLNWRYLAFAVAPDRLQQAIEGLAAMGCR 68
Query: 291 GFSVGIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALR 350
G SV IPHKE V +A+ +GAVN +I G G NTD ++ + L+
Sbjct: 69 GLSVTIPHKETVQPLLSSVDAVARELGAVNCLIPDG-QGGWRGTNTDWSGFLTPLSGRLQ 127
Query: 351 ERQGINGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRG-ARVIIFNRNYERAKALADA 409
E G +++G+GG RA+ G +V++ RN + +ALA+
Sbjct: 128 E---------------GGQALILGSGGVVRAVLRSCCELGIEQVVLRGRNRSKLEALAED 172
Query: 410 VSGEALHF------EYLHEFFPEKGMILANASAIGMEPNSDQSPVPKEALK---AYELVF 460
V A E L E+ ++ N + +GM DQ+P+ + L A +V+
Sbjct: 173 VRNWAPPLLLSSGDEPLEPLL-ERSNLVVNGTPLGMAEMRDQTPLSAQQLSLLPASAVVY 231
Query: 461 DAVYTPRNTRLLREAAEVGATVVSGVEMFIRQALGQFRLFTG 502
D VYTPR T LL+ AA+ G +V G+EM ++Q +L+TG
Sbjct: 232 DVVYTPRPTLLLKLAAQRGLSVFDGLEMLVQQGAAALKLWTG 273
>gi|406927177|gb|EKD63250.1| hypothetical protein ACD_51C00313G0006 [uncultured bacterium]
Length = 257
Score = 118 bits (296), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 85/277 (30%), Positives = 143/277 (51%), Gaps = 27/277 (9%)
Query: 238 KIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLV--DDVKEFFRTYSGTDFAGFSVG 295
K FG++++P GHS P +H AF+ + + +Y V +D+++F + G +V
Sbjct: 2 KKFGILAHPAGHSLSPKMHKAAFKTLKVSAVYEAFDVKPNDLEDFMKNLHEKHVDGLNVS 61
Query: 296 IPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALRERQGI 355
+P+K + + P+AK IGAVN I ++ +GK G N D + I ++
Sbjct: 62 MPYKTEVMQYLAGIDPVAKKIGAVNCIYKK--NGKYHGTNYDWKGIIEPLKK-------- 111
Query: 356 NGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGARVIIFNRNYERAKALADAVSGEAL 415
+P+ GK +L+GAGGA +A +G K GA+V I NR +E AK LAD +A
Sbjct: 112 ------ITPLKGKKVLLLGAGGAAKAACYGLKKEGAKVFILNRTFESAKHLADQYGFKAT 165
Query: 416 HFEYLHEFFPEKGMILANASAIGMEPNSDQSPVPKEALKAYELVFDAVYTPRNTRLLREA 475
EF PE I+ N +++G + N ++SP+ K ++V D +Y TR +++A
Sbjct: 166 E---TAEFMPE---IVINCTSVGFD-NPEESPINPRVFKDVKIVLDIIYG-HKTRFVKDA 217
Query: 476 AEVGA-TVVSGVEMFIRQALGQFRLFTGGLAPEDFMR 511
G +++G+E+ + Q + G AP++ MR
Sbjct: 218 RAAGVPYIITGLEVLLYQGYATLEKWLGVKAPKEVMR 254
>gi|402701993|ref|ZP_10849972.1| shikimate/quinate 5-dehydrogenase [Pseudomonas fragi A22]
Length = 271
Score = 118 bits (296), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 83/264 (31%), Positives = 127/264 (48%), Gaps = 20/264 (7%)
Query: 255 LHNPAFRHTRFNGIYVPMLVDDVKEFFRTYSGTDFAGFSVGIPHKEPAVACCDEVHPLAK 314
+HN A+ + +V V+D G +V +P+K + D + A+
Sbjct: 23 IHNAAYAALGLDYTFVCFGVEDPVAAVAAIRALGVRGMNVSMPYKTAVMPHLDAIDESAR 82
Query: 315 SIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALRERQGINGVASHTSPIAGKIFVLVG 374
IGAVNTI +DG L GYNTD AI A+++ R K ++G
Sbjct: 83 VIGAVNTI--NNVDGVLTGYNTDYLGAIRALQEVTGLRD--------------KRIAVIG 126
Query: 375 AGGAGRALAFGAKSRGARVIIFNRNYERAKALADAVSGEALHFEYLHEFFPEKGMILANA 434
AGGA RA+ FG ARV +FNR ER ALA+ + A + F I+ NA
Sbjct: 127 AGGAARAVVFGCLQAAARVTLFNRTAERGTALAEDLG--ARWGGSVEAFTASNFDIVINA 184
Query: 435 SAIGMEPNSDQSPVPKEALKAYELVFDAVYTPRNTRLLREAAEVGATVVSGVEMFIRQAL 494
+++G + D +P+ L ++ +V D + P +T LL++A +G T V+G M + QA
Sbjct: 185 TSVGFK-QPDSNPLDGR-LASHLIVMDVAFMPVHTALLQQAKALGCTTVAGTRMLVHQAC 242
Query: 495 GQFRLFTGGLAPEDFMRKLVLEQF 518
Q L+T AP D M + +L++
Sbjct: 243 RQIELYTEKEAPLDIMEQAMLQEI 266
>gi|448706084|ref|ZP_21700928.1| shikimate 5-dehydrogenase [Halobiforma nitratireducens JCM 10879]
gi|445795026|gb|EMA45563.1| shikimate 5-dehydrogenase [Halobiforma nitratireducens JCM 10879]
Length = 268
Score = 118 bits (296), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 94/284 (33%), Positives = 130/284 (45%), Gaps = 32/284 (11%)
Query: 238 KIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLVD--DVKEFFRTYSGTDFAGFSVG 295
+FGLV NPVGHS P +H A+ + YV + D++ + +G +V
Sbjct: 2 DVFGLVGNPVGHSLSPPMHEAAYDELGIDARYVTFEPEPGDLETALEGAAALGVSGLNVT 61
Query: 296 IPHKEPAVAC----CDEVHPLAKSIGAVNTII---RRPIDGKLVGYNTDCESAISAIEDA 348
IP K+ A+A D+ +A+ IGAVNT+ RP G+NTD A+ A+ +
Sbjct: 62 IPFKQDALASDLIVADD---MARRIGAVNTVDFSGDRP-----TGHNTDAAGALRALRN- 112
Query: 349 LRERQGINGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGARVIIFNRNYERAKALAD 408
G+ + + ++FG GA V I NR A LA
Sbjct: 113 ----HGVTATDASAVVVGAGGAGRA--------VSFGLADAGATVSIANRTASTAHDLAA 160
Query: 409 AVSGEALHFEYLHEFFPEKGMILANASAIGMEPNSDQSPVPKEALKAYELVFDAVYTPRN 468
AV H E IL NA+++GME D +PVP +AL V DAVY P
Sbjct: 161 AVPNATGHGLGELESLLADAEILVNATSVGME--EDATPVPADALHGDLAVLDAVYRPLE 218
Query: 469 TRLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRK 512
TRLL +AAE GAT V G M + Q + F +TG AP + M +
Sbjct: 219 TRLLADAAETGATTVDGAWMLLYQGVEAFERWTGRDAPVEAMNE 262
>gi|406946091|gb|EKD77393.1| shikimate 5-dehydrogenase I alpha [uncultured bacterium]
Length = 276
Score = 118 bits (296), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 78/268 (29%), Positives = 131/268 (48%), Gaps = 20/268 (7%)
Query: 233 INPDTKIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLVDDVKEFFRTYSGTDFAGF 292
+N T++ ++ P+ H+K P+LH +RH N + + +++ E A
Sbjct: 12 VNAGTQLNLVIGYPLQHTKSPLLHTTIYRHLHCNAVMLAHATNNLSETMNAAKTLSVALM 71
Query: 293 SVGIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALRER 352
+V +P+K+ + +V AK + +VNT+I R D KL GYNTD + A+ +
Sbjct: 72 AVTMPYKKEIINYLGDVSEEAKKLNSVNTVISR--DDKLFGYNTDVDGVAYALRNI---- 125
Query: 353 QGINGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGARVIIFNRNYERAKALADAVSG 412
+A K +++GAGGA A A+ + A + NR L G
Sbjct: 126 -----------SLANKNTLIIGAGGASHAAAYFLNKQNANLWWLNRTEHHVLPLITKFGG 174
Query: 413 EALHFEYLHEFFPEKGMILANASAIGMEPNSDQSPVPKEALKAYELVFDAVYTPRNTRLL 472
+ ++EF + I+ N + +GM P+ QSP+P + A ++VFD VY P +T L+
Sbjct: 175 NQVDKTKINEFPID---IIINTTPLGMFPDVHQSPLPNYSFNANQIVFDMVYNPIDTLLI 231
Query: 473 REAAEVGATVVSGVEMFIRQALGQFRLF 500
+ A E GA +SG++M I Q + Q L+
Sbjct: 232 KNAREKGAECISGIDMLIGQGIKQIELW 259
>gi|300811894|ref|ZP_07092355.1| shikimate dehydrogenase [Lactobacillus delbrueckii subsp.
bulgaricus PB2003/044-T3-4]
gi|300497091|gb|EFK32152.1| shikimate dehydrogenase [Lactobacillus delbrueckii subsp.
bulgaricus PB2003/044-T3-4]
Length = 310
Score = 118 bits (296), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 91/298 (30%), Positives = 144/298 (48%), Gaps = 39/298 (13%)
Query: 237 TKIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYV-----PMLVDDVKEFFRTYSGTDFAG 291
T + GL ++P+ HS P +HN A NG Y+ P + D + RT D G
Sbjct: 29 TILLGLFADPIRHSVSPTMHNNAMAKLGLNGAYLCFEIGPDRIGDAVKALRTL---DMRG 85
Query: 292 FSVGIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALRE 351
+V +P+K+ + D++ P A+ GAVNT++ G L GY TD + ++++ ++
Sbjct: 86 VNVSMPNKQAIIPYLDKLDPAAEICGAVNTVVND--HGFLTGYTTDGTGWLRSLQEDGQD 143
Query: 352 RQGINGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGARVI-IFN---RNYERAK--- 404
+ G++ L GAGGA +A GA+ I IFN RN+E AK
Sbjct: 144 -------------VKGQVVTLAGAGGAAIPIAVATAMGGAKEIRIFNIHDRNWEPAKDKV 190
Query: 405 ALADAVSGEALHF------EYLHEFFPEKGMILANASAIGMEPNSDQSPVPKEALKAYEL 458
A + +G A E + E G I +A+ +GM P D S V + ++
Sbjct: 191 AAINEATGCACSLNPMEDKEAFKQSIAESG-IYCDATGVGMPPLDDLSLVEAPSWLHEDM 249
Query: 459 VF-DAVYTPRNTRLLREAAEVGAT-VVSGVEMFIRQALGQFRLFTGGLAPEDFMRKLV 514
V D VY PR T+L+R A E G + +G+ M + Q F+L+TG P D+++++V
Sbjct: 250 VVSDTVYEPRETKLMRIAKEAGVKHIYNGLGMVVGQGAESFKLWTGKEMPTDYIQEIV 307
>gi|258515925|ref|YP_003192147.1| shikimate 5-dehydrogenase [Desulfotomaculum acetoxidans DSM 771]
gi|257779630|gb|ACV63524.1| shikimate 5-dehydrogenase [Desulfotomaculum acetoxidans DSM 771]
Length = 288
Score = 118 bits (296), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 88/292 (30%), Positives = 137/292 (46%), Gaps = 25/292 (8%)
Query: 232 HINPDTKIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLV--DDVKEFFRTYSGTDF 289
+I TKI G++ +P+ HS P +HN AF + YVP V D++ + + +
Sbjct: 5 NITGATKICGIIGDPIEHSFSPFMHNAAFAALGLDYAYVPFHVKRDNLSDALKAVRALNI 64
Query: 290 AGFSVGIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDAL 349
G +V +PHK+ + DE+ A IGAVNT++ G LVGYNTD + + L
Sbjct: 65 KGINVTVPHKQAVLQYLDEISSSASLIGAVNTVVNN--HGYLVGYNTDAPGFVRS----L 118
Query: 350 RERQGINGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGARVIIFNRNYERAKALADA 409
+E+ G SP IF+L G A A S + + I NR +RA+ +A
Sbjct: 119 KEQAGF-------SPEGAGIFILGAGGAARAVAVELALSGASLIHIANRTVDRAEEIAGL 171
Query: 410 VSGE--------ALHFEYLHEFFPEKGMILANASAIGMEPNSDQSPV-PKEALKAYELVF 460
+ G + L + + +I+ S GM P + P P +A A +LV
Sbjct: 172 IEGNTSCSSKAYSQQDLSLSKLMKDADLIIQTTSQ-GMYPRVTELPAYPLDAFHAGQLVC 230
Query: 461 DAVYTPRNTRLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRK 512
D +Y PR T L+ A + GA ++G+ M + Q F +TG +P + M +
Sbjct: 231 DLIYNPRQTIFLQMAEQCGAKTLNGMGMLLYQGALAFEYWTGLASPVEIMDQ 282
>gi|329943069|ref|ZP_08291843.1| shikimate 5-dehydrogenase [Chlamydophila psittaci Cal10]
gi|332287652|ref|YP_004422553.1| bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase
protein [Chlamydophila psittaci 6BC]
gi|384450809|ref|YP_005663409.1| 3-dehydroquinate dehydratase [Chlamydophila psittaci 6BC]
gi|384451804|ref|YP_005664402.1| bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase
protein [Chlamydophila psittaci 01DC11]
gi|384453757|ref|YP_005666353.1| bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase
protein [Chlamydophila psittaci C19/98]
gi|384454736|ref|YP_005667331.1| bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase
protein [Chlamydophila psittaci 02DC15]
gi|392376882|ref|YP_004064660.1| shikimate 5-dehydrogenase [Chlamydophila psittaci RD1]
gi|407454281|ref|YP_006733389.1| shikimate 5-dehydrogenase [Chlamydia psittaci 84/55]
gi|407456971|ref|YP_006735544.1| shikimate 5-dehydrogenase [Chlamydia psittaci VS225]
gi|313848225|emb|CBY17226.1| shikimate 5-dehydrogenase [Chlamydophila psittaci RD1]
gi|325506567|gb|ADZ18205.1| bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase
protein [Chlamydophila psittaci 6BC]
gi|328814616|gb|EGF84606.1| shikimate 5-dehydrogenase [Chlamydophila psittaci Cal10]
gi|328914903|gb|AEB55736.1| 3-dehydroquinate dehydratase/shikimate 5-dehydrogenase
[Chlamydophila psittaci 6BC]
gi|334692538|gb|AEG85757.1| bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase
protein [Chlamydophila psittaci C19/98]
gi|334693514|gb|AEG86732.1| bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase
protein [Chlamydophila psittaci 01DC11]
gi|334694493|gb|AEG87710.1| bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase
protein [Chlamydophila psittaci 02DC15]
gi|405781040|gb|AFS19790.1| shikimate 5-dehydrogenase [Chlamydia psittaci 84/55]
gi|405784232|gb|AFS22979.1| shikimate 5-dehydrogenase [Chlamydia psittaci VS225]
Length = 477
Score = 118 bits (296), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 107/413 (25%), Positives = 186/413 (45%), Gaps = 42/413 (10%)
Query: 94 DLDVEFVEMDYEVASDPLMSEIIYSRSNTKIIVSSYLNGGGKPTTEKLGDVIACMQATGA 153
+L E++++D + + L ++I + N KII+S + + T+E + ++ M A
Sbjct: 77 ELQPEYLDIDKDFPKEAL-AKIQKNYPNIKIILSYHSD-----TSEHIPNLCNEMLRRQA 130
Query: 154 DVMKLEIAVDSITDLAPVFEMLTHCQVPLIALAVGSRGLISQLLGPKFGGFLVYGSLGGK 213
K+ I D ++ H L +G+ G+ S++L P + Y S G
Sbjct: 131 HHYKIAITSTKSIDTLRCIQIKKHLPENTTLLCMGNAGIASRILSPLMKNAINYAS--GI 188
Query: 214 SVPGLPT-LVSLKQV--YQLEHINPDTKIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYV 270
+ P + +S++ + Y +++ +++I+GL+ NPV S + HN F + N Y+
Sbjct: 189 NAPKVAQGQLSIEDLLAYNYTNLSSESRIYGLIGNPVDRSISHLSHNKLFSELQLNMSYI 248
Query: 271 PMLVD--DVKEFFRTYSGTDFAGFSVGIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPID 328
+L+ ++ EFF F G SV +P K + D + P + + NT++ R D
Sbjct: 249 KILLTPYELNEFFSLTRDLPFGGLSVTMPFKTDVLEYIDILDPSVQQCQSCNTLVFR--D 306
Query: 329 GKLVGYNTDCESAISAIEDALRERQGINGVASHTSPIAGKIFVLVGAGGAGRALAFGAKS 388
K+ GYNTD ++ L +R+ I H +VG+GGA +A+A
Sbjct: 307 NKIAGYNTDGLGLLN-----LLKRKNILLQNKHVG--------IVGSGGAAKAIATTFAD 353
Query: 389 RGARVIIFNRNYERAKALADAVSGEALHFEYLHEFFPEKGMILANASAIGMEPNSDQSPV 448
GA++ IFNR A+ L+ G+A L E +IL P
Sbjct: 354 SGAQISIFNRTKTHAEKLSVLCHGQAFPLNALSENHNIDILILC-------------LPP 400
Query: 449 PKEALKAY-ELVFDAVYTPRNTRLLREAAEVGATVVSGVEMFIRQALGQFRLF 500
E + Y ++ D P+ + ++A E G ++ G EMF QAL QF L+
Sbjct: 401 DVEIPEIYPPVIIDINTLPKESLYTKKAKERGCQILYGYEMFAEQALLQFSLW 453
>gi|417988792|ref|ZP_12629317.1| shikimate/quinate 5-dehydrogenase I beta [Lactobacillus casei
A2-362]
gi|417995199|ref|ZP_12635501.1| shikimate/quinate 5-dehydrogenase I beta [Lactobacillus casei M36]
gi|417998257|ref|ZP_12638484.1| shikimate/quinate 5-dehydrogenase I beta [Lactobacillus casei
T71499]
gi|418012569|ref|ZP_12652268.1| shikimate/quinate 5-dehydrogenase I beta [Lactobacillus casei
Lpc-37]
gi|410538579|gb|EKQ13131.1| shikimate/quinate 5-dehydrogenase I beta [Lactobacillus casei M36]
gi|410540743|gb|EKQ15252.1| shikimate/quinate 5-dehydrogenase I beta [Lactobacillus casei
A2-362]
gi|410541537|gb|EKQ16016.1| shikimate/quinate 5-dehydrogenase I beta [Lactobacillus casei
T71499]
gi|410556721|gb|EKQ30597.1| shikimate/quinate 5-dehydrogenase I beta [Lactobacillus casei
Lpc-37]
Length = 296
Score = 118 bits (296), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 94/289 (32%), Positives = 136/289 (47%), Gaps = 30/289 (10%)
Query: 233 INPDTKIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLVD--DVKEFFRTYSGTDFA 290
I+ T + L+ +PVGHS P ++N +F+ + + YV V + E
Sbjct: 5 ISGTTGLLCLLGSPVGHSGSPAMYNFSFQKQKIDAAYVAFDVTKGQMPEALNAMRLFKMR 64
Query: 291 GFSVGIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALR 350
G +V +P K A DE+ P AK IGAVN ++ DGKL+G+ TD + +++
Sbjct: 65 GGNVTMPCKNVAATLMDELSPAAKIIGAVNVVVND--DGKLIGHITDGIGFVRNLQE--- 119
Query: 351 ERQGINGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGARVI-IFNRN---YERA--- 403
H I GK V++GAGGA A+ A GA+ I IFNR Y RA
Sbjct: 120 ----------HGIDIKGKHLVVLGAGGAATAIQVQAALDGAKQITIFNRQDEFYSRAEST 169
Query: 404 -KALADAVSGEALHFEYLHEFFPEKGMI-----LANASAIGMEPNSDQSPVPKEALKAYE 457
K LA+A + L K I L NA+ +GM+P+ S V L+A
Sbjct: 170 AKKLAEAAPAVKVDVVQLENTDRLKAAIADADILVNATTVGMKPDDGVSLVDPSFLRADL 229
Query: 458 LVFDAVYTPRNTRLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAP 506
+V D VY P T+L+ +A +VGA G M + Q ++L+TG P
Sbjct: 230 VVADTVYNPLKTKLIEDAEKVGAKTAPGKGMLLWQGAAGYQLWTGQDMP 278
>gi|395225305|ref|ZP_10403832.1| shikimate 5-dehydrogenase [Thiovulum sp. ES]
gi|394446552|gb|EJF07373.1| shikimate 5-dehydrogenase [Thiovulum sp. ES]
Length = 261
Score = 118 bits (296), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 85/287 (29%), Positives = 137/287 (47%), Gaps = 33/287 (11%)
Query: 238 KIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLVDDVKEFFRTYSGTDFAGFSVGIP 297
K+F + NPV HSK P++HN F+ + Y+ ++D K + +G SV +P
Sbjct: 2 KLFTIFGNPVSHSKSPLIHNSVFKKYALDHRYIRTAIEDGKTIPDVMKNLNISGASVTVP 61
Query: 298 HKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALRERQGING 357
HKE A CDEV +A+ IGAVN ++R GK++GYNTD + I +I D E+
Sbjct: 62 HKEVAFQICDEVQGVARDIGAVNCLVRNNC-GKIIGYNTDGDGFIHSIRDWKFEK----- 115
Query: 358 VASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGAR-VIIFNRNYERAKALAD-AVSGEAL 415
++VGAGG +A+ ++G + V I NR+ R K + +S
Sbjct: 116 ------------ILIVGAGGTAKAIVHSFINQGFKNVSIVNRSLNRLKDFENLCISVNTW 163
Query: 416 HFEYLHEFFPEKGMILANASAIGMEPNSDQSPVPKEALKAY----ELVFDAVYTPRNTRL 471
+ F ++ N ++ G++ D P+PKE L+A + V DA+Y T
Sbjct: 164 DNLKIDSF-----DLIVNVTSAGLK--DDLLPMPKEILEALFEKGKYVVDAIY--HETPF 214
Query: 472 LREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRKLVLEQF 518
LR A E G G +M + Q + +F ++ + K +++ F
Sbjct: 215 LRLAKEKGLETKDGSDMLVYQGVLANSIFLERKISKELIEKEMIKIF 261
>gi|294497741|ref|YP_003561441.1| shikimate 5-dehydrogenase [Bacillus megaterium QM B1551]
gi|294347678|gb|ADE68007.1| shikimate 5-dehydrogenase [Bacillus megaterium QM B1551]
Length = 298
Score = 118 bits (296), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 85/302 (28%), Positives = 143/302 (47%), Gaps = 33/302 (10%)
Query: 233 INPDTKIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLV--DDVKEFFRTYSGTDFA 290
IN T++ GL++ P+GHS P +HN AF+ N Y+ V D +++ + +
Sbjct: 7 INGKTQLIGLLATPIGHSLSPSMHNMAFKKLGLNYAYLAFEVGNDSLEDAIKGLRALNVK 66
Query: 291 GFSVGIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALR 350
GF+V +P+K + DE+ AK GAVNT++ +G LVG++TD I +++
Sbjct: 67 GFNVSMPNKTKILPFLDELADSAKFSGAVNTVVND--NGVLVGHSTDGMGYIRNLKE--- 121
Query: 351 ERQGINGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRG-ARVIIFNRN---YERAKAL 406
H I GK L+G+GGA +A A G + IF R+ Y +A
Sbjct: 122 ----------HGVDITGKKMTLIGSGGAATPIAIQAALEGLEELTIFARHDEFYSKAVEN 171
Query: 407 ADAVSGEALHFEYLHEFFPEKGM-----------ILANASAIGMEPNSDQSPVPK-EALK 454
++ E H + + + IL N + +GM+P + S + L+
Sbjct: 172 VKIINEEMKHVSCKAKLYSLEDTDMLREEIRTSDILTNGTGVGMKPLEEFSIIEDISMLR 231
Query: 455 AYELVFDAVYTPRNTRLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRKLV 514
+V D VY P ++LL +A +G ++G+ M I Q F L+TG P +++++ +
Sbjct: 232 PDLIVTDVVYMPMRSKLLEQAESIGCHTINGIGMMIWQGAMAFELWTGKEMPVEYIKEQM 291
Query: 515 LE 516
E
Sbjct: 292 FE 293
>gi|423106412|ref|ZP_17094113.1| shikimate dehydrogenase [Klebsiella oxytoca 10-5242]
gi|376377849|gb|EHS90616.1| shikimate dehydrogenase [Klebsiella oxytoca 10-5242]
Length = 287
Score = 118 bits (296), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 86/300 (28%), Positives = 147/300 (49%), Gaps = 30/300 (10%)
Query: 231 EHINPDTKIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLV--DDVKEFFRTYSGTD 288
E I T++ GL++ P+ HS P +HN AF H + +Y+ V +++K+ + +
Sbjct: 3 ERITGHTELIGLIATPIRHSMSPTMHNEAFAHLGLDYVYLAFEVGNEELKDVVQGFRALK 62
Query: 289 FAGFSVGIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDA 348
G +V +P+K D++ P A+ +GAVNT++ +G L G+ TD + A+++
Sbjct: 63 LRGCNVSMPNKTEICQYLDKLSPAAELVGAVNTVVND--NGVLTGHITDGTGYMRALKE- 119
Query: 349 LRERQGINGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGARVI-IFNR------NYE 401
+GI+ I GK ++GAGGA AL A + I IFNR N E
Sbjct: 120 ----EGID--------IIGKKMTVLGAGGAATALCVQAALDDVKAISIFNRKDKFFANAE 167
Query: 402 RAKALADAVSGEALHFEYLHEFFP-----EKGMILANASAIGMEPNSDQSPVPKEA-LKA 455
+ A + +H L + + +IL NA+ +GM+P Q +P ++ L+
Sbjct: 168 QTVAKIRNNTNCEIHLFDLDDHDKLRAEIDSSVILTNATGVGMKPFEGQMLLPDDSFLRP 227
Query: 456 YELVFDAVYTPRNTRLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRKLVL 515
+V D VY PR T LL A + G ++G+ M + Q F ++TG P + ++ ++
Sbjct: 228 DLIVSDVVYNPRKTYLLEVAEKKGCRTINGLGMMLWQGARAFEIWTGKEMPVEHVKNILF 287
>gi|217967442|ref|YP_002352948.1| shikimate 5-dehydrogenase [Dictyoglomus turgidum DSM 6724]
gi|226729103|sp|B8E257.1|AROE_DICTD RecName: Full=Shikimate dehydrogenase
gi|217336541|gb|ACK42334.1| shikimate 5-dehydrogenase [Dictyoglomus turgidum DSM 6724]
Length = 275
Score = 118 bits (296), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 90/291 (30%), Positives = 147/291 (50%), Gaps = 34/291 (11%)
Query: 233 INPDTKIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLVDDVKEFF-RTYSGTDF-- 289
I+P TK++GL+ P+GHS +HN AFR + +Y+ + ++ EFF + G +
Sbjct: 2 ISPSTKLYGLIGYPLGHSISFYIHNAAFRALSIDALYLNIPIE--PEFFSKAILGIKYLP 59
Query: 290 -AGFSVGIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDA 348
G +V IPHKE + DE+ ++ +GAVNT+ R + K G NTD + +ED
Sbjct: 60 IYGLNVTIPHKESIIEFLDEISEISNILGAVNTVYRE--NHKWKGDNTDFGGFLKTLEDL 117
Query: 349 LRERQGINGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGAR-VIIFNRNYERAKALA 407
++S S + ++GAGGA RA+ + G + V + NR YERA+ +A
Sbjct: 118 --------NLSSDFSCL------ILGAGGAARAVIYAVLEYGFKEVYLTNRTYERAEKIA 163
Query: 408 DAVSGEALHFEYL------HEFFPEKGMILANASAIGMEPNSDQSPVPKEALKAYELVFD 461
V +FE E EK +IL N ++IG++ ++P + K V+D
Sbjct: 164 VEVKKNK-NFEIKVIPWEDREKISEK-VILINTTSIGLD--GKETPWNGD-FKKLVFVYD 218
Query: 462 AVYTPRNTRLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRK 512
+Y P+ T LL+ A E +G++M I QA + + G + P + M++
Sbjct: 219 IIYNPKETPLLKLAKENNVPYKNGLDMLIYQACLSWEKWFGFVGPFEVMKR 269
>gi|398890972|ref|ZP_10644441.1| shikimate 5-dehydrogenase [Pseudomonas sp. GM55]
gi|398187570|gb|EJM74907.1| shikimate 5-dehydrogenase [Pseudomonas sp. GM55]
Length = 271
Score = 118 bits (296), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 80/264 (30%), Positives = 130/264 (49%), Gaps = 22/264 (8%)
Query: 255 LHNPAFRHTRFNGIYVPMLVDDVKEFFRTYSGTDFAGFSVGIPHKEPAVACCDEVHPLAK 314
+HN A+ + +V V+D G +V +P+K + D + A+
Sbjct: 23 IHNAAYAALGLDYTFVCFGVEDPVAAVAAIRALGVRGMNVSMPYKTVVMPHLDRIDESAQ 82
Query: 315 SIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALRERQGINGVASHTSPIAGKIFVLVG 374
IGAVNTI +DG L GYNTD A+ A+++ + ++ K ++G
Sbjct: 83 VIGAVNTI--NNVDGVLTGYNTDYLGAVRALQE--------------VTELSDKRIAVIG 126
Query: 375 AGGAGRALAFGAKSRGARVIIFNRNYERAKALADAVSGEALHFEYLHEFFPEKGM-ILAN 433
AGGA RA+ +G A V +FNR++ER ALA+ + + E F K I+ N
Sbjct: 127 AGGAARAVVYGCLQEAAEVTVFNRSFERGAALAEDLGA---RWGGSVEMFTAKTFDIVIN 183
Query: 434 ASAIGMEPNSDQSPVPKEALKAYELVFDAVYTPRNTRLLREAAEVGATVVSGVEMFIRQA 493
A+++G + D +P+ L ++ +V D + P T LL +A +G + V+G M + QA
Sbjct: 184 ATSVGFK-QPDSNPLDGR-LASHLIVMDVAFMPVQTALLLQAKALGCSTVAGTRMLVHQA 241
Query: 494 LGQFRLFTGGLAPEDFMRKLVLEQ 517
Q L+TG AP D M + +L++
Sbjct: 242 CRQIELYTGKDAPIDIMEQAMLQE 265
>gi|418631434|ref|ZP_13193897.1| shikimate dehydrogenase [Staphylococcus epidermidis VCU128]
gi|374835325|gb|EHR98941.1| shikimate dehydrogenase [Staphylococcus epidermidis VCU128]
Length = 269
Score = 118 bits (296), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 85/285 (29%), Positives = 142/285 (49%), Gaps = 28/285 (9%)
Query: 240 FGLVSNPVGHSKGPILHNPAFRHTRFNGIY--VPMLVDDVKEFFRTYSGTDFAGFSVGIP 297
F ++ NP+ HS P++H+ F+ Y + + V+ +++ + S GF+V IP
Sbjct: 3 FAVIGNPISHSLSPLMHHANFQSLNLESTYEAINVPVNQLQDIKKIISEKSIDGFNVTIP 62
Query: 298 HKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALRERQGING 357
HKE + D+++ AKS+GAVNT++ + DGK +GYNTD +NG
Sbjct: 63 HKERIIPYLDDINEQAKSVGAVNTVLIK--DGKWIGYNTDGIGY-------------VNG 107
Query: 358 VASHTSPIAGKIFVLVGAGGAGRALAFG-AKSRGARVIIFNRNYERAKALADAVSGEAL- 415
+ I +++GAGGA + +A K + I NR R + ++ L
Sbjct: 108 LKQIYEGIEDAYILILGAGGASKGIANELYKIVRPTITIANRTMSRFNNWSLNINKINLS 167
Query: 416 HFE-YLHEFFPEKGMILANASAIGMEPNSDQSPVPKEALKAYELVFDAVYTPRNTRLLRE 474
H E +L EF I+ N + GM N D S + L ++ LV D VY P T +L E
Sbjct: 168 HAERHLDEF-----DIIINTTPAGMYGNKD-SVISLNRLASHTLVSDIVYNPYKTPILIE 221
Query: 475 AAEVGATVVSGVEMFIRQALGQFRLFTGGLAPE-DFMRKLVLEQF 518
A + G + +G++MF+ Q F+++T L P+ + M+ +V+ +
Sbjct: 222 AEQKGNPIYNGLDMFVHQGAESFKIWT-NLEPDIEAMKNVVIHEL 265
>gi|374710081|ref|ZP_09714515.1| shikimate 5-dehydrogenase [Sporolactobacillus inulinus CASD]
Length = 295
Score = 118 bits (296), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 88/305 (28%), Positives = 146/305 (47%), Gaps = 32/305 (10%)
Query: 230 LEHINPDTKIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPM-LVDDVKEFFRTYSGTD 288
++ IN T+++GL ++P HS P++HN +FR N +Y+ + D+ + + D
Sbjct: 2 IDTINGHTRLYGLFAHPAKHSLSPLMHNLSFRKRGINAVYLAFDMTGDLGDAVNSIRQFD 61
Query: 289 FAGFSVGIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDA 348
G ++ +P K + DE+ P A IGAVNTI+ R DG L+G NTD + +
Sbjct: 62 MGGVNLSMPFKRTVIPFLDELTPTADLIGAVNTIMNR--DGHLIGANTDGTGFFAHL--- 116
Query: 349 LRERQGINGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGARVI-IFNRNYERAKALA 407
NG A++ K ++GAGGAG ++ S+G I +F R A++
Sbjct: 117 -----AANGYATNR-----KTATVLGAGGAGLSIIAAGASKGLSTIHVFKRRNASFPAVS 166
Query: 408 DAVSGEALHFE---YLHEFFPEKGM--------ILANASAIGMEPNSDQSPVPK---EAL 453
D + A + LH++ E + L N++ IGM ++ + PV + + L
Sbjct: 167 DQLRQIAAAYPTTIQLHDYNDEAALQRALSESDFLINSTNIGMGDDA-KLPVAEALIDCL 225
Query: 454 KAYELVFDAVYTPRNTRLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRKL 513
+V DA+Y PR TR L A + G +G+ M I Q F+ +T P D +
Sbjct: 226 SPSAVVCDAIYEPRQTRFLHAAKQHGCITFNGLGMLIYQGAQAFQRWTDQEMPIDDVEDA 285
Query: 514 VLEQF 518
+L++
Sbjct: 286 LLKEL 290
>gi|373464004|ref|ZP_09555572.1| shikimate dehydrogenase [Lactobacillus kisonensis F0435]
gi|371763400|gb|EHO51877.1| shikimate dehydrogenase [Lactobacillus kisonensis F0435]
Length = 289
Score = 118 bits (296), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 86/290 (29%), Positives = 142/290 (48%), Gaps = 31/290 (10%)
Query: 233 INPDTKIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLV--DDVKEFFRTYSGTDFA 290
I+ TK+FGL+++P HS P++HN +F+ T NG Y+ V D + +
Sbjct: 2 IDGHTKLFGLLAHPAAHSLSPLIHNTSFKITGINGAYLAFDVTSDGLADSLAAMRAMGIG 61
Query: 291 GFSVGIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALR 350
GF++ +P K + DEV P A+ + AVNT+I R +G L G +TD + + DAL+
Sbjct: 62 GFNLSMPLKTDVIPLLDEVTPRAERLQAVNTVINR--NGHLTGDSTDGQGFV----DALK 115
Query: 351 ERQGINGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRG-ARVIIFNRNYERAKALADA 409
+R +AG ++GAGGAGR++ A G ++ +F RN +
Sbjct: 116 QR---------AIELAGATLTVLGAGGAGRSIISAAVDAGVTKIHVFKRNNASFMPVKHQ 166
Query: 410 VSGEALHFEYLHEFFPEKGMILA--------NASAIGMEPNSDQSPVPKEALKAYE---L 458
+ + E + ++ E MI A NA+ +GM +S + P+ + + ++ +
Sbjct: 167 LEAWSTAIE-VTDYDDEAAMIHAVDTSQIVVNATNLGMAADS-ELPINQAVIDHFKPEHV 224
Query: 459 VFDAVYTPRNTRLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPED 508
V D +Y P T L A + G+ +G+ M + QA G F +TG P D
Sbjct: 225 VVDVIYFPLTTPFLVAAKKRGSHTYNGIGMLVHQAAGSFLEWTGQKMPVD 274
>gi|327507667|sp|C0S433.1|ARO1_PARBP RecName: Full=Pentafunctional AROM polypeptide; Includes: RecName:
Full=3-dehydroquinate synthase; Short=DHQS; Includes:
RecName: Full=3-phosphoshikimate
1-carboxyvinyltransferase; AltName:
Full=5-enolpyruvylshikimate-3-phosphate synthase;
Short=EPSP synthase; Short=EPSPS; Includes: RecName:
Full=Shikimate kinase; Short=SK; Includes: RecName:
Full=3-dehydroquinate dehydratase;
Short=3-dehydroquinase; Includes: RecName: Full=Shikimate
dehydrogenase
gi|225681904|gb|EEH20188.1| pentafunctional AROM polypeptide [Paracoccidioides brasiliensis Pb03]
Length = 1603
Score = 118 bits (295), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 138/542 (25%), Positives = 226/542 (41%), Gaps = 91/542 (16%)
Query: 34 GADLVELCIDSMEF----SHISEVDKLIQH-------PTLPAIVSYRLKSSRKSSDEACK 82
G+D VEL +D ++ S I VD + + ++P + + R KS +
Sbjct: 1083 GSDAVELRVDLLKDPQSDSEIPSVDYVAEQISVLRSRVSVPLVFTIRTKSQGGRFPDDAY 1142
Query: 83 NTCLQVLRRALDLDVEFVEMDYEVASDPLMSEIIYSRSNTKIIVS--------SYLNGGG 134
+ LQ+ R A+ + EFV+++ L+ + + +KII S S+ NG
Sbjct: 1143 DAALQLYRLAIRMGSEFVDLELSFPKQ-LLRTVTEMKGFSKIIASHHDPEGLLSWANGSW 1201
Query: 135 KPTTEKLGDVIACMQATGADVMKLEIAVDSITDLAPVFEMLTHCQ----VPLIALAVGSR 190
K +Q DV+KL ++ D A + + T + VPLIA+ +G +
Sbjct: 1202 IQIYNK------ALQY--GDVIKLVGVAKTLDDNASLKKFKTWAEAKHDVPLIAINMGYK 1253
Query: 191 GLISQLLGPKFGGFLV---YGSLGGKSVPGLPTLVSLKQVYQLEHINPDTKIFGLVSNPV 247
G +S++L GF+ + SL K+ PG + +++ L K F ++ PV
Sbjct: 1254 GQLSRILN----GFMTPVSHPSLPFKAAPGQLSAREIRKGLSLMG-EIKAKKFAVIGKPV 1308
Query: 248 GHSKGPILHNPAFRHTRFNGIYVPMLVD---DVKEFFRTYSGTDFAGFSVGIPHKEPAVA 304
S+ P +HN F+ Y + D DVKEF + DF G SV IP K +
Sbjct: 1309 SSSRSPAMHNALFKQMGLPHTYGRIETDNVEDVKEFILS---PDFGGASVTIPLKLDIMP 1365
Query: 305 CCDEVHPLAKSIGAVNTIIRRPI-------DGKLVGYNTDCESAISAIEDALRERQGING 357
DE+ P A+ IGAVNTI+ P +L+G NTD + + + DA G
Sbjct: 1366 LLDEIAPEAEMIGAVNTIVSVPAAPGDKFQSSRLIGRNTDWQGMVRCLSDA--------G 1417
Query: 358 VASHTSPIAGKIFVLVGAGGAGRALAFGAKSRG-ARVIIFNRNYERAKALA--------- 407
S +P +++G GG RA F S + + I R+ E+ +A
Sbjct: 1418 AYSAATPTTSSAGLIIGGGGTARAAIFALNSMSYSPIYIVGRSPEKLACMASSFPADYNI 1477
Query: 408 ----DAVSGEALHFEYLHEFFPEKGM----------ILANASAIGMEPNSDQSPVPKEAL 453
D + E+L + +K + IL+ +E PK L
Sbjct: 1478 RIVDDVKALESLPMVAIGTIPGDKPIELHMREVLCEILSLCEKANVEAERKTGITPKRIL 1537
Query: 454 KAYELVFDAVYTPRNTRLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRKL 513
+ Y P T L++ A++ G TV+ G+E+ + Q + Q +T + RK
Sbjct: 1538 ------LEMAYKPSVTSLMKLASDAGWTVLPGLEVLVAQGVYQSEYWTDITPVYENARKA 1591
Query: 514 VL 515
V+
Sbjct: 1592 VM 1593
>gi|336468271|gb|EGO56434.1| hypothetical protein NEUTE1DRAFT_147102 [Neurospora tetrasperma FGSC
2508]
Length = 1596
Score = 118 bits (295), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 148/512 (28%), Positives = 219/512 (42%), Gaps = 72/512 (14%)
Query: 32 VEGADLVELCIDSMEFSHISEVDK----LIQHPTLPAIVSYRLKSSRKSSDEACKNTCLQ 87
V G+D VEL +D +E V K L +P + + R S +A L+
Sbjct: 1101 VVGSDAVELRVDLLEDYDPEFVAKQVALLRSAARIPIVYTVRTVSQGGKFPDADYELALK 1160
Query: 88 VLRRALDLDVEFVEMDYEVASDPLMSEIIYSRSNTKIIVS--------SYLNGGGKPTTE 139
+ R L VE+++++ + D ++ + ++ T II S S+ NGG
Sbjct: 1161 LYRTGLQAGVEYLDLEMTM-PDEVIEAVTNAKGYTHIIASHHDPKATLSWKNGGWVQYYN 1219
Query: 140 KLGDVIACMQATGADVMKLEIAVDSITD---LAPVFEMLTHCQ-VPLIALAVGSRGLISQ 195
K +Q DV+KL + D LA L PLIAL +G+ G +S+
Sbjct: 1220 K------ALQH--GDVVKLVGVARELADNFALARFKASLAAAHDKPLIALNMGAAGKLSR 1271
Query: 196 LLGPKFGGFLV---YGSLGGKSVPGLPTLVSLKQVYQL-EHINPDTKIFGLVSNPVGHSK 251
+L GFL + +L K+ PG + ++Q L + P + F L NP+ S+
Sbjct: 1272 VLN----GFLTPVSHPALPSKAAPGQLSAAEIRQALALIGELEP--RSFHLFGNPISASR 1325
Query: 252 GPILHNPAFRHTRFNGIYVPMLVDDVKEFFRTYSGTDFAGFSVGIPHKEPAVACCDEVHP 311
P LHN FR Y D+ + F G SV IP K + DEV
Sbjct: 1326 SPALHNALFRDNGLPHQYSLFETDNAADVKDLIQAPGFGGASVTIPLKLDIMPLLDEVSD 1385
Query: 312 LAKSIGAVNTII--RRPIDGKLVGYNTDCESAISAIEDALRERQGINGVA--SHTSPIAG 367
AK IGAVNTII R L G NTD + A+ +A GV S SP AG
Sbjct: 1386 AAKVIGAVNTIIPVRNGDKVTLRGDNTDWMGMVYALRNA--------GVVKCSKESPTAG 1437
Query: 368 KIFVLVGAGGAGRALAFGAKSRG-ARVIIFNRNYERAKALADAVSGEALHFEYLHEFFPE 426
++VGAGG RA G A + + RN +R KALA++ E ++ PE
Sbjct: 1438 ---MVVGAGGTTRAAVHALHDLGFAPIYVVARNADRVKALAESFPAE---YDIRSLSTPE 1491
Query: 427 KGMILANA------SAIGMEPNSDQSPVPKEALKA----------YELVFDAVYTPRNTR 470
+ + A S I + DQS +E + A ++ + YTPR+T
Sbjct: 1492 EVAAESTAQPSVVISTIPADKPIDQS--MREVIVASLRHPSVADGKHVLLEMAYTPRHTP 1549
Query: 471 LLREAAEVGATVVSGVEMFIRQALGQFRLFTG 502
L++ A + + G+E+ Q QF+L+TG
Sbjct: 1550 LMQLAEDAHWQTIPGLEVLAAQGWYQFQLWTG 1581
>gi|340751883|ref|ZP_08688693.1| shikimate 5-dehydrogenase [Fusobacterium mortiferum ATCC 9817]
gi|229420848|gb|EEO35895.1| shikimate 5-dehydrogenase [Fusobacterium mortiferum ATCC 9817]
Length = 273
Score = 118 bits (295), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 75/266 (28%), Positives = 128/266 (48%), Gaps = 23/266 (8%)
Query: 240 FGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLVDDVKEFFRTYSGTDFAGFSVGIPHK 299
+GLV +GHS P +HN F Y ++D K+ + GF++ IP+K
Sbjct: 4 YGLVGKKLGHSLSPEIHNYIFDKLGVEAEYSLYEIEDGKDILKLMEEKGIKGFNITIPYK 63
Query: 300 EPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALRERQGINGVA 359
E ++ D + A+ IGAVN + + +G+ GYN+D + +E
Sbjct: 64 EIVMSQLDFISEEAEKIGAVNLV--KIKNGESYGYNSDYYGVVEMLE------------- 108
Query: 360 SHTSPIAGKIFVLVGAGGAGRALAFGAKSRGAR-VIIFNRNYE-RAKALADAVSG-EALH 416
H + GKI ++G+GGA +++ GA+ +++ R+ E + + L + E +
Sbjct: 109 KHDVKVKGKICYVLGSGGASKSVIVALHDLGAKEIVVVTRDVESKRRELKNRFRNIEVVS 168
Query: 417 FEYLHEFFPEKGMILANASAIGMEPNSDQSPVPKEALKAYELVFDAVYTPRNTRLLREAA 476
+E + G I+ N + +GM PN D SP+ +E LK +++ D VY P+ T+ L+ A
Sbjct: 169 YENII-----GGDIVVNTTPLGMYPNIDSSPLDEEILKRFDIAVDIVYNPKTTKFLQLAK 223
Query: 477 EVGATVVSGVEMFIRQALGQFRLFTG 502
V GV M + QA+ L+ G
Sbjct: 224 NCSLKCVDGVSMLVGQAIKSDELWEG 249
>gi|397165245|ref|ZP_10488698.1| shikimate / quinate 5-dehydrogenase family protein [Enterobacter
radicincitans DSM 16656]
gi|396093352|gb|EJI90909.1| shikimate / quinate 5-dehydrogenase family protein [Enterobacter
radicincitans DSM 16656]
Length = 288
Score = 118 bits (295), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 92/293 (31%), Positives = 141/293 (48%), Gaps = 32/293 (10%)
Query: 238 KIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLVDDVKEFFRTYSGTD---FAGFSV 294
++ GL++ P+ HS P + N A Y+ VD+ F +G G V
Sbjct: 8 ELIGLMAYPIRHSLSPEMQNKALEKAGLPFTYMAFEVDN-STFANAIAGLKALKMRGTGV 66
Query: 295 GIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALRERQG 354
+P+K+ A DE+ P AK +GA+NTI+ DG L GYNTD I AI+++ G
Sbjct: 67 SMPNKQLACEYVDELTPAAKLVGAINTIVND--DGYLRGYNTDGTGHIRAIKES-----G 119
Query: 355 INGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGARVI-IFNRN---YERAKALADAV 410
+ I GK VL+GAGGA A+ G + I +FNR +E+A A A V
Sbjct: 120 FD--------IKGKTMVLLGAGGASTAIGAQGAIEGLKEIKLFNRRDDFFEKAVAFARRV 171
Query: 411 SGEALHFEYLHEFFPEKGM--------ILANASAIGMEPNSDQSPVPK-EALKAYELVFD 461
+ + + +K IL N + IGM+P DQS + L+ LV +
Sbjct: 172 NENTDCVVTVTDLADQKAFAAALATADILTNGTKIGMKPLDDQSLISDISLLRPGLLVTE 231
Query: 462 AVYTPRNTRLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRKLV 514
VY P T+LL++A + G + G M + Q QF+L+TG P ++++ ++
Sbjct: 232 CVYNPHITKLLQQAQQAGCKTIDGYGMLLWQGAEQFKLWTGKEFPLEYVKHVM 284
>gi|386393521|ref|ZP_10078302.1| shikimate 5-dehydrogenase [Desulfovibrio sp. U5L]
gi|385734399|gb|EIG54597.1| shikimate 5-dehydrogenase [Desulfovibrio sp. U5L]
Length = 270
Score = 118 bits (295), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 88/283 (31%), Positives = 132/283 (46%), Gaps = 22/283 (7%)
Query: 237 TKIFGLVSNPVGHSKGPILHNPAFRHTRFNGIY--VPMLVDDVKEFFRTYSGTDFAGFSV 294
T+++G++ +P+GH+ P++HN F Y P D++ F T G SV
Sbjct: 2 TRLYGIIGHPLGHTLSPLVHNWGFARFGIEARYEAWPTPPDELPAFMARLRETPIQGLSV 61
Query: 295 GIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALRERQG 354
IPHK + D V L + +GAVNT+ R G L NTD +
Sbjct: 62 TIPHKTAVMDFVDVVTDLGREVGAVNTLFWR--GGALHADNTDVAGFCRPLV-------- 111
Query: 355 INGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGARVIIFNRNYERAKALADAVSGEA 414
+ G+A + + G R L R+ + R+ E+A ALA E
Sbjct: 112 VRGIAPEAALLLGCGGAARAVAAGLRRLQV------PRIGVTGRSMEKAGALAREFGLEP 165
Query: 415 LHFEYLHEFFPEKGMILANASAIGMEPNSDQ-SPVPKEALKAYELVFDAVYTPRNTRLLR 473
+ +E +F ++ NA+ IGM + S P A + L +D VY P TR L
Sbjct: 166 VAWEDRADF---PAALVVNATPIGMAGRHEGVSAYPAAAWEPGRLAYDLVYNPYETRFLA 222
Query: 474 EAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRKLVLE 516
+AA GA VV G+EMF+ QA+ QF L+TG + P+D +R L++E
Sbjct: 223 DAARAGAGVVPGLEMFLYQAVEQFCLWTGRVLPDDELRPLLME 265
>gi|374813782|ref|ZP_09717519.1| shikimate 5-dehydrogenase [Treponema primitia ZAS-1]
Length = 281
Score = 118 bits (295), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 87/289 (30%), Positives = 139/289 (48%), Gaps = 22/289 (7%)
Query: 237 TKIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLV--DDVKEFFRTYSGTDFAGFSV 294
+++ G+ PV + ++ AF+ N Y+ MLV +++ F +FAG ++
Sbjct: 7 SELVGVFGCPVDENPTIVMEEAAFKAKNLNWRYITMLVKPENLDAAFEALRALNFAGVNL 66
Query: 295 GIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALRERQG 354
IPHK A+ D + A+ IGA+NTII R DGKL G NTD + ++ +QG
Sbjct: 67 TIPHKVEALKYVDGLSKKAELIGAINTIINR--DGKLFGENTDGAGFVQGMQ-----KQG 119
Query: 355 INGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGA-RVIIFNRNYERAKALADAVSG- 412
+ + GK V++GAGGA RA+ GA +++I NR +A +A V
Sbjct: 120 LE--------LRGKSIVVLGAGGASRAICVECALAGAGKLLILNRTLHKADEIAAVVKKN 171
Query: 413 ---EALHFEYLHEFFPEKGMILANASAIGMEPNSDQSPVPKEALKAYELVFDAVYTPRNT 469
E E+ IL NA++IG+ P+ + E + +V D + P T
Sbjct: 172 TPCEVKTAEWKGTAHIPPCDILINATSIGLFPDPGFPDIFYEDITPAMIVQDIIPNPAKT 231
Query: 470 RLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRKLVLEQF 518
L++A E GA G+ M + Q F+L+TG AP + M + ++F
Sbjct: 232 EFLKKAKERGAMTYDGLSMLVEQGAIGFKLWTGQDAPTEVMHSALAKEF 280
>gi|409351411|ref|ZP_11234133.1| Shikimate dehydrogenase [Lactobacillus equicursoris CIP 110162]
gi|407876775|emb|CCK86191.1| Shikimate dehydrogenase [Lactobacillus equicursoris CIP 110162]
Length = 310
Score = 118 bits (295), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 87/297 (29%), Positives = 143/297 (48%), Gaps = 37/297 (12%)
Query: 237 TKIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLVDDVK-----EFFRTYSGTDFAG 291
T + GL++ P+ H+ P +HN AF NG Y+ +D+ K + RT D G
Sbjct: 29 TILVGLMAYPIRHTMSPTMHNNAFAKLGLNGAYLCFEIDNEKLPGAIDAIRTL---DMRG 85
Query: 292 FSVGIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALRE 351
+V +P+K+ + D++ ++ AVNTI+ G L GY TD + ++
Sbjct: 86 SNVSMPNKKKVIPYLDKLDKTSQMCDAVNTIVNDH--GVLTGYTTDGMGWLRSL-----N 138
Query: 352 RQGINGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGARVI-IFNRN---YERAKALA 407
+ G + GK+ L GAGGA +A A GA+ I IFN N +E+A
Sbjct: 139 KDG--------QDVKGKVITLAGAGGAATPIAVTASLSGAKEIRIFNLNDDKWEQAVKNV 190
Query: 408 DAVSGEA------LHFEYLHEFFPE--KGMILANASAIGMEPNSDQSPVPKEALKAYELV 459
D ++ E H E +F + I +A+++GM P DQ+ V + ++V
Sbjct: 191 DTINKETDCVATVHHLEDREDFKKSIAESDIYCDATSVGMNPLQDQTLVDDPSWFHEDMV 250
Query: 460 F-DAVYTPRNTRLLREAAEVGAT-VVSGVEMFIRQALGQFRLFTGGLAPEDFMRKLV 514
D VY PR T+L+ A + G + +G+ M I Q F+L+TG P D++++++
Sbjct: 251 VSDTVYAPRKTKLMEVAEKAGVKHIYNGIGMMIEQGAAAFKLWTGKEMPTDYIQEIM 307
>gi|448666831|ref|ZP_21685476.1| shikimate 5-dehydrogenase [Haloarcula amylolytica JCM 13557]
gi|445771962|gb|EMA23018.1| shikimate 5-dehydrogenase [Haloarcula amylolytica JCM 13557]
Length = 265
Score = 118 bits (295), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 104/287 (36%), Positives = 140/287 (48%), Gaps = 29/287 (10%)
Query: 238 KIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYV---PMLVDDVKEFFRTYS-GTDFAGFS 293
++GL+ NPVGHS P +H + + YV P + + G D G +
Sbjct: 2 DVYGLIGNPVGHSLSPPMHEAGYEALGLDARYVTFEPAADAGAEAIEAAETLGID--GLN 59
Query: 294 VGIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKL-VGYNTDCESAISAIEDALRER 352
V IP K+ + D PLA+ IGAVNT+ G GYNTD A+ A+
Sbjct: 60 VTIPFKQDVLDAVDPA-PLAERIGAVNTV---DFSGDTPTGYNTDAVGAVRAL------- 108
Query: 353 QGINGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGARVIIFNRNYERAKALADAVSG 412
+H V+VGAGGAGRA+AFG G V + NR +A ALAD V
Sbjct: 109 -------AHHDVSLSGTAVVVGAGGAGRAVAFGLADEGLSVRVANRTESKADALADEVPA 161
Query: 413 EALH-FEYLHEFFPEKGMILANASAIGMEPNSDQSPVPKEALKAYELVFDAVYTPRNTRL 471
H + L + + IL N +++GME D++PVP +AL + V DAVYTP TRL
Sbjct: 162 ATGHGLDSLPDLLADAD-ILVNCTSVGME--EDETPVPADALHSDIAVLDAVYTPIETRL 218
Query: 472 LREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRKLVLEQF 518
L++AA GAT V G M + Q + F +TG AP D M + E
Sbjct: 219 LQDAAAAGATTVDGAWMLLYQGVEAFERWTGEDAPVDRMNDQLREHL 265
>gi|350289476|gb|EGZ70701.1| putative PENTAFUNCTIONAL AROM polypeptide [Neurospora tetrasperma
FGSC 2509]
Length = 1563
Score = 118 bits (295), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 148/512 (28%), Positives = 219/512 (42%), Gaps = 72/512 (14%)
Query: 32 VEGADLVELCIDSMEFSHISEVDK----LIQHPTLPAIVSYRLKSSRKSSDEACKNTCLQ 87
V G+D VEL +D +E V K L +P + + R S +A L+
Sbjct: 1068 VVGSDAVELRVDLLEDYDPEFVAKQVALLRSAARIPIVYTVRTVSQGGKFPDADYKLALK 1127
Query: 88 VLRRALDLDVEFVEMDYEVASDPLMSEIIYSRSNTKIIVS--------SYLNGGGKPTTE 139
+ R L VE+++++ + D ++ + ++ T II S S+ NGG
Sbjct: 1128 LYRTGLQAGVEYLDLEMTM-PDEVIEAVTNAKGYTHIIASHHDPKATLSWKNGGWVQYYN 1186
Query: 140 KLGDVIACMQATGADVMKLEIAVDSITD---LAPVFEMLTHCQ-VPLIALAVGSRGLISQ 195
K +Q DV+KL + D LA L PLIAL +G+ G +S+
Sbjct: 1187 K------ALQH--GDVVKLVGVARELADNFALARFKASLAAAHDKPLIALNMGAAGKLSR 1238
Query: 196 LLGPKFGGFLV---YGSLGGKSVPGLPTLVSLKQVYQL-EHINPDTKIFGLVSNPVGHSK 251
+L GFL + +L K+ PG + ++Q L + P + F L NP+ S+
Sbjct: 1239 VLN----GFLTPVSHPALPSKAAPGQLSAAEIRQALALIGELEP--RSFHLFGNPISASR 1292
Query: 252 GPILHNPAFRHTRFNGIYVPMLVDDVKEFFRTYSGTDFAGFSVGIPHKEPAVACCDEVHP 311
P LHN FR Y D+ + F G SV IP K + DEV
Sbjct: 1293 SPALHNALFRDNGLPHQYSLFETDNAADVKDLIQAPGFGGASVTIPLKLDIMPLLDEVSD 1352
Query: 312 LAKSIGAVNTII--RRPIDGKLVGYNTDCESAISAIEDALRERQGINGVA--SHTSPIAG 367
AK IGAVNTII R L G NTD + A+ +A GV S SP AG
Sbjct: 1353 AAKVIGAVNTIIPVRNGDKVTLRGDNTDWMGMVYALRNA--------GVVKCSKESPTAG 1404
Query: 368 KIFVLVGAGGAGRALAFGAKSRG-ARVIIFNRNYERAKALADAVSGEALHFEYLHEFFPE 426
++VGAGG RA G A + + RN +R KALA++ E ++ PE
Sbjct: 1405 ---MVVGAGGTTRAAVHALHDLGFAPIYVVARNADRVKALAESFPAE---YDIRSLSTPE 1458
Query: 427 KGMILANA------SAIGMEPNSDQSPVPKEALKA----------YELVFDAVYTPRNTR 470
+ + A S I + DQS +E + A ++ + YTPR+T
Sbjct: 1459 EVAAESTAQPSVVISTIPADKPIDQS--MREVIVASLRHPSVADGKHVLLEMAYTPRHTP 1516
Query: 471 LLREAAEVGATVVSGVEMFIRQALGQFRLFTG 502
L++ A + + G+E+ Q QF+L+TG
Sbjct: 1517 LMQLAEDAHWQTIPGLEVLAAQGWYQFQLWTG 1548
>gi|330508958|ref|YP_004385386.1| shikimate 5-dehydrogenase [Methanosaeta concilii GP6]
gi|328929766|gb|AEB69568.1| shikimate 5-dehydrogenase [Methanosaeta concilii GP6]
Length = 284
Score = 118 bits (295), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 103/290 (35%), Positives = 146/290 (50%), Gaps = 25/290 (8%)
Query: 238 KIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLV--DDVKEFFRTYSGTDFAGFSVG 295
KIFG+ +P+ HS P + N AFR +G Y V +K+ F G ++
Sbjct: 2 KIFGIFGDPIEHSLSPAMQNAAFRALGMDGCYHAFRVSRSRLKDAVIGADAMGFGGLNLT 61
Query: 296 IPHKEPAVAC-CDEVHPLAKSIGAVNTIIRRPIDG------KLVGYNTDCESAISAIEDA 348
IP KE A++ E LA++IGAVNTI G ++ GYNTD A+SA++DA
Sbjct: 62 IPLKEEALSLDFLEADDLARAIGAVNTISFSGEAGEEKGKNRIQGYNTDGWGALSALQDA 121
Query: 349 LRERQGINGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGARVIIFNRNYERAKALAD 408
GV + G +L+GAGGA RA+A+ GA V I NRN +RA LA
Sbjct: 122 --------GV-----KVKGSRVLLIGAGGAARAIAYALDREGAEVSIANRNLKRAHELAA 168
Query: 409 AVSGEALHFEYLHEFFPEKGMILANASAIGMEPNSDQSPVPKEALKAYELVFDAVYTPRN 468
+V G + L + +I+ NA+++GM D + LK++ +VFD VY R
Sbjct: 169 SVGGISYCLCDLEPLVRQADVII-NATSVGMRE-GDGRIIDSRLLKSHHVVFDIVYN-RE 225
Query: 469 TRLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRKLVLEQF 518
T LL +A +GA + GV M + Q F ++TG AP D M + V E
Sbjct: 226 TELLWDARSIGAAAIDGVMMLVYQGARAFEIWTGRKAPADVMERAVRESL 275
>gi|258404226|ref|YP_003196968.1| shikimate 5-dehydrogenase [Desulfohalobium retbaense DSM 5692]
gi|257796453|gb|ACV67390.1| shikimate 5-dehydrogenase [Desulfohalobium retbaense DSM 5692]
Length = 271
Score = 118 bits (295), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 84/271 (30%), Positives = 133/271 (49%), Gaps = 24/271 (8%)
Query: 236 DTKIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLVDDVK--EFFRTYSGTDFAGFS 293
D ++FG++ +P+GHS P+LHN A G Y+ + + +F G S
Sbjct: 3 DPRLFGIIGHPLGHSLSPVLHNWALEAQGIPGSYLRWDIPPARLADFVTAARLLPIHGAS 62
Query: 294 VGIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALRERQ 353
V IPHK + D + A+ GAVNT+ +L G NTD E ++ +
Sbjct: 63 VTIPHKVEVIDYLDRITDRARQAGAVNTLYWE--QDRLCGTNTDSEGFLAPL-------- 112
Query: 354 GINGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGARVIIFNRNYERAKALADAVSGE 413
+AS P + +++G GGA RA G V I R E+++ LA A G
Sbjct: 113 ----LASSRFP---RSALILGNGGAARACLAALLEHGTEVWICGRRREQSEVLAAAFGGH 165
Query: 414 ALHFEYLHEFFPEKGMILANASAIGMEPNSDQ-SPVPKE-ALKAYELVFDAVYTPRNTRL 471
L +E E +L N++ +GM + SP+P+ +L+ + V++ +Y P +T L
Sbjct: 166 VLDWESRSTASAE---LLVNSTPLGMAGQRESLSPMPQNGSLQNFATVYELIYNPMDTVL 222
Query: 472 LREAAEVGATVVSGVEMFIRQALGQFRLFTG 502
+R+A E G ++G+ MF+ QA QFRL+TG
Sbjct: 223 IRQAREEGLQTITGLAMFVHQAAAQFRLWTG 253
>gi|389846143|ref|YP_006348382.1| shikimate 5-dehydrogenase [Haloferax mediterranei ATCC 33500]
gi|448616238|ref|ZP_21664948.1| shikimate 5-dehydrogenase [Haloferax mediterranei ATCC 33500]
gi|388243449|gb|AFK18395.1| shikimate 5-dehydrogenase [Haloferax mediterranei ATCC 33500]
gi|445750893|gb|EMA02330.1| shikimate 5-dehydrogenase [Haloferax mediterranei ATCC 33500]
Length = 269
Score = 118 bits (295), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 108/273 (39%), Positives = 133/273 (48%), Gaps = 24/273 (8%)
Query: 238 KIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLVDDVKEFFRTYSGTD---FAGFSV 294
+++GLV NPVGHS P +H A+ HT + YV + G D AG +V
Sbjct: 2 QVYGLVGNPVGHSLSPPMHEAAYEHTGLDARYV-TFEPEPSAIEAAVDGADALGIAGLNV 60
Query: 295 GIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALRERQG 354
IP K+ + D PLA IGAVNTI DG GYNTD A E
Sbjct: 61 TIPFKQDVLDLVDP-DPLAARIGAVNTIDFE--DGDPKGYNTDAAGVTRAFE-------- 109
Query: 355 INGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGARVIIFNRNYERAKALADAVSG-E 413
H + G V+VGAGGAGRA AF GA V I NR E A LAD V G
Sbjct: 110 -----RHDISLDGANAVVVGAGGAGRAAAFALADAGAAVHIANRTAETAGELADVVPGAT 164
Query: 414 ALHFEYLHEFFPEKGMILANASAIGMEPNSDQSPVPKEALKAYELVFDAVYTPRNTRLLR 473
+ L + +L NA+++GME D++PVP L V DAVY P TRLLR
Sbjct: 165 GGGLDTLDRI--QDASVLVNATSVGME-APDETPVPATHLHGDLAVLDAVYAPLETRLLR 221
Query: 474 EAAEVGATVVSGVEMFIRQALGQFRLFTGGLAP 506
EAA+ GA + G M + Q + F L+TG AP
Sbjct: 222 EAADAGAVTIDGAWMLLLQGVEAFELWTGLDAP 254
>gi|302386967|ref|YP_003822789.1| shikimate 5-dehydrogenase [Clostridium saccharolyticum WM1]
gi|302197595|gb|ADL05166.1| shikimate 5-dehydrogenase [Clostridium saccharolyticum WM1]
Length = 290
Score = 118 bits (295), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 96/303 (31%), Positives = 146/303 (48%), Gaps = 31/303 (10%)
Query: 231 EHINPDTKIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVP--MLVDDVKEFFRTYSGTD 288
+ I+ T + GL+ +PVGHS P ++N F + Y+ + V++V +
Sbjct: 3 KRISGKTGLLGLIGSPVGHSGSPAMYNYCFEKLGLDYAYLAFDIQVEEVPKAMEAIRTFH 62
Query: 289 FAGFSVGIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDA 348
G +V +P K AV DE+ P A+ IGAVNTI+ DGKLVG+ TD + + D
Sbjct: 63 MRGCNVTMPCKNEAVKYMDELSPAARIIGAVNTIVNE--DGKLVGHITDGHGFVDNLRD- 119
Query: 349 LRERQGINGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGARVI-IFNRN---YERAK 404
H IAGK ++ G GGA A+ GAR I IFNR +ER
Sbjct: 120 ------------HGVEIAGKKIIVCGGGGAAAAIQVQCALEGAREISIFNRKDGFFERTL 167
Query: 405 ALADAVSGE-------ALHFEYLHEFFPEKGM--ILANASAIGMEPNSDQSPVPKEAL-K 454
A+ + E + E G ILANA+ +GM+P ++S + + +
Sbjct: 168 QTAERIRQEKPDCIVNVYDIGDMETMRAEMGSSDILANATILGMKPMDNESVIKDVTMFR 227
Query: 455 AYELVFDAVYTPRNTRLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRKLV 514
+V DAVY P+ T++L+EA G T ++G M + Q F+L+TG P + ++KL
Sbjct: 228 PGLVVVDAVYNPKETKMLKEAKAAGCTCINGQGMLVWQGAEAFKLYTGLEMPVEEVKKLF 287
Query: 515 LEQ 517
+
Sbjct: 288 FRE 290
>gi|308182041|ref|YP_003926169.1| shikimate 5-dehydrogenase [Lactobacillus plantarum subsp. plantarum
ST-III]
gi|308047532|gb|ADO00076.1| shikimate 5-dehydrogenase [Lactobacillus plantarum subsp. plantarum
ST-III]
Length = 296
Score = 118 bits (295), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 99/306 (32%), Positives = 153/306 (50%), Gaps = 37/306 (12%)
Query: 231 EHINPDTKIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLVDDVK-----EFFRTYS 285
E I+ T + GL++ P+ HS P +HN AF N Y+ +D+ K E RT
Sbjct: 3 ERIDGHTLLIGLMAYPIRHSMSPTMHNNAFAKLGLNYAYLAFEIDNKKLPSAIESIRTL- 61
Query: 286 GTDFAGFSVGIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAI 345
D G +V +P+K+ + D++ P A+ GAVNTI+ DG L GY TD + ++
Sbjct: 62 --DMRGSNVSMPNKQKVLPLLDKLDPAAEMCGAVNTIVND--DGILTGYTTDGIGFMKSL 117
Query: 346 EDALRERQGINGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRG-ARVIIFNRN---YE 401
+D +GIN I G L GAGGAG A+A A G + + IFN + +E
Sbjct: 118 DD-----EGIN--------IRGHKMTLAGAGGAGTAIAVQAALDGVSEMSIFNLHDAEWE 164
Query: 402 RAKALADAVSGEALHFEYLHEFFP--------EKGMILANASAIGMEPNSDQSPVPKEA- 452
AK D ++ LHE + I +A+ +GM+P D++ V +
Sbjct: 165 NAKHNVDLINERTSCHATLHELEDRDDFKKEIQDSYIYTDATGVGMKPLEDKTLVDDPSW 224
Query: 453 LKAYELVFDAVYTPRNTRLLREAAEVGAT-VVSGVEMFIRQALGQFRLFTGGLAPEDFMR 511
L+ +VFD VY PR T+L++ A E G V +G+ M + Q F+L+TG P D++R
Sbjct: 225 LRKDLIVFDTVYAPRTTKLMKVAQEAGVEHVFNGLGMMLEQGAAAFKLWTGEDMPVDYIR 284
Query: 512 KLVLEQ 517
++ ++
Sbjct: 285 HILFDE 290
>gi|27468200|ref|NP_764837.1| shikimate dehydrogenease [Staphylococcus epidermidis ATCC 12228]
gi|32129422|sp|Q8CP09.1|AROE_STAES RecName: Full=Shikimate dehydrogenase
gi|27315746|gb|AAO04881.1|AE016748_115 shikimate dehydrogenease [Staphylococcus epidermidis ATCC 12228]
Length = 272
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 84/285 (29%), Positives = 142/285 (49%), Gaps = 28/285 (9%)
Query: 240 FGLVSNPVGHSKGPILHNPAFRHTRFNGIY--VPMLVDDVKEFFRTYSGTDFAGFSVGIP 297
F ++ NP+ HS P++H+ F+ Y + + V+ ++ + S GF+V IP
Sbjct: 6 FAVIGNPISHSLSPLMHHANFQSLNLENTYEAINVPVNQFQDIKKIISEKSIDGFNVTIP 65
Query: 298 HKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALRERQGING 357
HKE + D+++ AKS+GAVNT++ + DGK +GYNTD +NG
Sbjct: 66 HKERIIPYLDDINEQAKSVGAVNTVLVK--DGKWIGYNTDGIGY-------------VNG 110
Query: 358 VASHTSPIAGKIFVLVGAGGAGRALAFG-AKSRGARVIIFNRNYERAKALADAVSGEAL- 415
+ I +++GAGGA + +A K + + NR R + ++ L
Sbjct: 111 LKQIYEGIEDAYILILGAGGASKGIANELYKIVRPTLTVANRTMSRFNNWSLNINKINLS 170
Query: 416 HFE-YLHEFFPEKGMILANASAIGMEPNSDQSPVPKEALKAYELVFDAVYTPRNTRLLRE 474
H E +L EF I+ N + GM N+D S + L ++ LV D VY P T +L E
Sbjct: 171 HAESHLDEF-----DIIINTTPAGMNGNTD-SVISLNRLASHTLVSDIVYNPYKTPILIE 224
Query: 475 AAEVGATVVSGVEMFIRQALGQFRLFTGGLAPE-DFMRKLVLEQF 518
A + G + +G++MF+ Q F+++T L P+ M+ +V+++
Sbjct: 225 AEQRGNPIYNGLDMFVHQGAESFKIWT-NLEPDIKAMKNIVIQKL 268
>gi|327507666|sp|C1FYJ9.1|ARO1_PARBD RecName: Full=Pentafunctional AROM polypeptide; Includes: RecName:
Full=3-dehydroquinate synthase; Short=DHQS; Includes:
RecName: Full=3-phosphoshikimate
1-carboxyvinyltransferase; AltName:
Full=5-enolpyruvylshikimate-3-phosphate synthase;
Short=EPSP synthase; Short=EPSPS; Includes: RecName:
Full=Shikimate kinase; Short=SK; Includes: RecName:
Full=3-dehydroquinate dehydratase;
Short=3-dehydroquinase; Includes: RecName: Full=Shikimate
dehydrogenase
gi|226289074|gb|EEH44586.1| pentafunctional AROM polypeptide [Paracoccidioides brasiliensis Pb18]
Length = 1538
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 138/542 (25%), Positives = 227/542 (41%), Gaps = 91/542 (16%)
Query: 34 GADLVELCIDSMEF----SHISEVDKLIQH-------PTLPAIVSYRLKSSRKSSDEACK 82
G+D VEL +D ++ S I VD + + ++P + + R KS +
Sbjct: 994 GSDAVELRVDLLKDPQSDSEIPSVDYVAEQISVLRSRVSVPLVFTIRTKSQGGRFPDDAY 1053
Query: 83 NTCLQVLRRALDLDVEFVEMDYEVASDPLMSEIIYSRSNTKIIVS--------SYLNGGG 134
+ LQ+ R A+ + EFV+++ + L+ + + +KII S S+ NG
Sbjct: 1054 DAALQLYRLAIRMGSEFVDLELSFP-EQLLRTVTEMKGFSKIIASHHDPEGLLSWANGSW 1112
Query: 135 KPTTEKLGDVIACMQATGADVMKLEIAVDSITDLAPVFEMLTHCQ----VPLIALAVGSR 190
K +Q DV+KL ++ D A + + T + VPLIA+ +G +
Sbjct: 1113 IQIYNK------ALQY--GDVIKLVGVAKTLDDNASLKKFKTWAEAKHDVPLIAINMGYK 1164
Query: 191 GLISQLLGPKFGGFLV---YGSLGGKSVPGLPTLVSLKQVYQLEHINPDTKIFGLVSNPV 247
G +S++L GF+ + SL K+ PG + +++ L K F ++ PV
Sbjct: 1165 GQLSRILN----GFMTPVSHPSLPFKAAPGQLSAREIRKGLSLMG-EIKAKKFAVIGKPV 1219
Query: 248 GHSKGPILHNPAFRHTRFNGIYVPMLVD---DVKEFFRTYSGTDFAGFSVGIPHKEPAVA 304
S+ P +HN F+ Y + D DVKEF + DF G SV IP K +
Sbjct: 1220 SSSRSPAMHNALFKQMGLPHTYGRIETDNVEDVKEFILS---PDFGGASVTIPLKLDIMP 1276
Query: 305 CCDEVHPLAKSIGAVNTIIRRPI-------DGKLVGYNTDCESAISAIEDALRERQGING 357
DE+ P A+ IGAVNTI+ P +L+G NTD + + + DA G
Sbjct: 1277 LLDEIAPEAEMIGAVNTIVSVPAAPGDKSQSSRLIGRNTDWQGMVRCLSDA--------G 1328
Query: 358 VASHTSPIAGKIFVLVGAGGAGRALAFGAKSRG-ARVIIFNRNYERAKALA--------- 407
S +P +++G GG RA F S + + I R+ E+ +A
Sbjct: 1329 AYSAATPTTSSAGLIIGGGGTARAAIFALNSMSYSPIYIVGRSPEKLACMASSFPADYNI 1388
Query: 408 ----DAVSGEALHFEYLHEFFPEKGM----------ILANASAIGMEPNSDQSPVPKEAL 453
D + E+L + +K + IL+ +E PK L
Sbjct: 1389 RIVDDVKALESLPMVAIGTIPGDKPIELHMREVLCEILSLCEKANVEAERKTGITPKRIL 1448
Query: 454 KAYELVFDAVYTPRNTRLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRKL 513
+ Y P T L++ A++ G TV+ G+E+ + Q + Q +T + RK
Sbjct: 1449 ------LEMAYKPSVTSLMKLASDAGWTVLPGLEVLVAQGVYQSEYWTDITPVYENARKA 1502
Query: 514 VL 515
V+
Sbjct: 1503 VM 1504
>gi|152992066|ref|YP_001357787.1| shikimate 5-dehydrogenase [Sulfurovum sp. NBC37-1]
gi|151423927|dbj|BAF71430.1| shikimate 5-dehydrogenase [Sulfurovum sp. NBC37-1]
Length = 265
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 81/268 (30%), Positives = 123/268 (45%), Gaps = 29/268 (10%)
Query: 238 KIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLVDDVKEFFRTYSGTDFAGFSVGIP 297
++F + NPV HSK P++HN AF+ F G Y ++D + T+ G ++ +P
Sbjct: 4 QLFAIFGNPVSHSKSPLMHNLAFKGLGFEGCYNRYRLEDGTKLKETFFALGLRGINITVP 63
Query: 298 HKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALRERQGING 357
HKE A A CDE+ P A+ +GAVNTI+ + G L GYNTD + AI E + +
Sbjct: 64 HKEHAYAACDELDPFARKVGAVNTIVEK--KGILYGYNTDAPGFLKAIS----EFENVKK 117
Query: 358 VASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGARVIIFNRNYERAKALADAVSGEALHF 417
V + +GAGG ++ + + G V + NR+ R + A E
Sbjct: 118 V------------LFLGAGGTAQSTSAILRDEGYEVTLLNRSAGRLERFAQ----EGFKT 161
Query: 418 EYLHEFFPEKGMILANASAIGMEPNSDQSPVPKEALKAY----ELVFDAVYTPRNTRLLR 473
F PE ++ N ++ G+E D P PKE L A + D +Y + T L+
Sbjct: 162 ATFETFTPESYDLVINMTSAGLE--DDALPAPKELLDAVIPSAKACVDVIYG-KETPFLK 218
Query: 474 EAAEVGATVVSGVEMFIRQALGQFRLFT 501
A + G M + Q + F FT
Sbjct: 219 LAKSLRKPTKDGSNMLLYQGIIAFEHFT 246
>gi|283798361|ref|ZP_06347514.1| shikimate dehydrogenase [Clostridium sp. M62/1]
gi|291073945|gb|EFE11309.1| shikimate dehydrogenase [Clostridium sp. M62/1]
gi|295092817|emb|CBK78924.1| shikimate dehydrogenase [Clostridium cf. saccharolyticum K10]
Length = 502
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 85/282 (30%), Positives = 147/282 (52%), Gaps = 26/282 (9%)
Query: 233 INPDTKIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLV--DDVKEFFRTYSGTDFA 290
+N TK+ G++++PV HS P+L N T + +YVP V ++++ R +
Sbjct: 16 VNGTTKVCGILADPVEHSMSPMLQNLYGNSTGTDMVYVPFRVKEEELEAAVRGAFALNIR 75
Query: 291 GFSVGIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALR 350
G +V +PHK+ + D + AK++GAVNT++R +G GYNTD + A+ +A
Sbjct: 76 GLNVTVPHKQSVMRFLDGIDETAKAVGAVNTLVR--TEGGYKGYNTDVPGLLRAVREA-- 131
Query: 351 ERQGINGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGAR-VIIFNRNYERAKALADA 409
GI I G+ +L+GAGGA +A A+ GA + + NR+ +RA +LAD
Sbjct: 132 ---GIE--------IRGRNCILIGAGGAAKAAAYLLAGEGAEHIYLLNRSMDRAASLADW 180
Query: 410 VSGEALHFEYLHEF-------FPEKGMILANASAIGMEPNSDQSPVP-KEALKAYELVFD 461
++G++ E + P+ + ++++GM PN+D +P+ +E + + D
Sbjct: 181 INGQSGGRELVTALPVSEWRSIPDGRYLAIQSTSVGMYPNTDSAPIEDREFYRLIDEAVD 240
Query: 462 AVYTPRNTRLLREAAEVGATVVSGVEMFIRQALGQFRLFTGG 503
+YTP T+ +R E G V+G+ M I Q + + L+ G
Sbjct: 241 IIYTPAETKFMRLVREAGGRAVNGLNMLIYQGVISYELWYPG 282
>gi|57867066|ref|YP_188739.1| shikimate 5-dehydrogenase [Staphylococcus epidermidis RP62A]
gi|251811012|ref|ZP_04825485.1| shikimate dehydrogenease [Staphylococcus epidermidis BCM-HMP0060]
gi|282875976|ref|ZP_06284843.1| shikimate dehydrogenase [Staphylococcus epidermidis SK135]
gi|417913720|ref|ZP_12557383.1| shikimate dehydrogenase [Staphylococcus epidermidis VCU109]
gi|418606026|ref|ZP_13169322.1| shikimate dehydrogenase [Staphylococcus epidermidis VCU057]
gi|418609480|ref|ZP_13172632.1| shikimate dehydrogenase [Staphylococcus epidermidis VCU065]
gi|418612796|ref|ZP_13175820.1| shikimate dehydrogenase [Staphylococcus epidermidis VCU117]
gi|418625281|ref|ZP_13187934.1| shikimate dehydrogenase [Staphylococcus epidermidis VCU125]
gi|418626391|ref|ZP_13189003.1| shikimate dehydrogenase [Staphylococcus epidermidis VCU126]
gi|418629399|ref|ZP_13191907.1| shikimate dehydrogenase [Staphylococcus epidermidis VCU127]
gi|419769474|ref|ZP_14295568.1| shikimate dehydrogenase [Staphylococcus aureus subsp. aureus
IS-250]
gi|419771800|ref|ZP_14297846.1| shikimate dehydrogenase [Staphylococcus aureus subsp. aureus IS-K]
gi|420165585|ref|ZP_14672276.1| shikimate dehydrogenase [Staphylococcus epidermidis NIHLM088]
gi|420170302|ref|ZP_14676863.1| shikimate dehydrogenase [Staphylococcus epidermidis NIHLM070]
gi|420172648|ref|ZP_14679147.1| shikimate dehydrogenase [Staphylococcus epidermidis NIHLM067]
gi|420197474|ref|ZP_14703198.1| shikimate dehydrogenase [Staphylococcus epidermidis NIHLM020]
gi|420202365|ref|ZP_14707958.1| shikimate dehydrogenase [Staphylococcus epidermidis NIHLM018]
gi|420209101|ref|ZP_14714539.1| shikimate dehydrogenase [Staphylococcus epidermidis NIHLM003]
gi|420211257|ref|ZP_14716631.1| shikimate dehydrogenase [Staphylococcus epidermidis NIHLM001]
gi|420227385|ref|ZP_14732154.1| shikimate dehydrogenase [Staphylococcus epidermidis NIH05003]
gi|421606910|ref|ZP_16048161.1| shikimate 5-dehydrogenase [Staphylococcus epidermidis AU12-03]
gi|71152254|sp|Q5HNV1.1|AROE_STAEQ RecName: Full=Shikimate dehydrogenase
gi|57637724|gb|AAW54512.1| shikimate 5-dehydrogenase [Staphylococcus epidermidis RP62A]
gi|251805522|gb|EES58179.1| shikimate dehydrogenease [Staphylococcus epidermidis BCM-HMP0060]
gi|281295001|gb|EFA87528.1| shikimate dehydrogenase [Staphylococcus epidermidis SK135]
gi|341654742|gb|EGS78480.1| shikimate dehydrogenase [Staphylococcus epidermidis VCU109]
gi|374407694|gb|EHQ78546.1| shikimate dehydrogenase [Staphylococcus epidermidis VCU065]
gi|374409465|gb|EHQ80256.1| shikimate dehydrogenase [Staphylococcus epidermidis VCU057]
gi|374817873|gb|EHR82048.1| shikimate dehydrogenase [Staphylococcus epidermidis VCU117]
gi|374825423|gb|EHR89359.1| shikimate dehydrogenase [Staphylococcus epidermidis VCU125]
gi|374832825|gb|EHR96530.1| shikimate dehydrogenase [Staphylococcus epidermidis VCU126]
gi|374834102|gb|EHR97762.1| shikimate dehydrogenase [Staphylococcus epidermidis VCU127]
gi|383358093|gb|EID35554.1| shikimate dehydrogenase [Staphylococcus aureus subsp. aureus
IS-250]
gi|383360619|gb|EID38014.1| shikimate dehydrogenase [Staphylococcus aureus subsp. aureus IS-K]
gi|394235386|gb|EJD80958.1| shikimate dehydrogenase [Staphylococcus epidermidis NIHLM088]
gi|394240640|gb|EJD86063.1| shikimate dehydrogenase [Staphylococcus epidermidis NIHLM070]
gi|394241809|gb|EJD87218.1| shikimate dehydrogenase [Staphylococcus epidermidis NIHLM067]
gi|394266281|gb|EJE10927.1| shikimate dehydrogenase [Staphylococcus epidermidis NIHLM020]
gi|394269773|gb|EJE14303.1| shikimate dehydrogenase [Staphylococcus epidermidis NIHLM018]
gi|394279329|gb|EJE23637.1| shikimate dehydrogenase [Staphylococcus epidermidis NIHLM003]
gi|394281710|gb|EJE25936.1| shikimate dehydrogenase [Staphylococcus epidermidis NIHLM001]
gi|394297191|gb|EJE40800.1| shikimate dehydrogenase [Staphylococcus epidermidis NIH05003]
gi|406657379|gb|EKC83767.1| shikimate 5-dehydrogenase [Staphylococcus epidermidis AU12-03]
Length = 269
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 84/285 (29%), Positives = 142/285 (49%), Gaps = 28/285 (9%)
Query: 240 FGLVSNPVGHSKGPILHNPAFRHTRFNGIY--VPMLVDDVKEFFRTYSGTDFAGFSVGIP 297
F ++ NP+ HS P++H+ F+ Y + + V+ ++ + S GF+V IP
Sbjct: 3 FAVIGNPISHSLSPLMHHANFQSLNLENTYEAINVPVNQFQDIKKIISEKSIDGFNVTIP 62
Query: 298 HKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALRERQGING 357
HKE + D+++ AKS+GAVNT++ + DGK +GYNTD +NG
Sbjct: 63 HKERIIPYLDDINEQAKSVGAVNTVLVK--DGKWIGYNTDGIGY-------------VNG 107
Query: 358 VASHTSPIAGKIFVLVGAGGAGRALAFG-AKSRGARVIIFNRNYERAKALADAVSGEAL- 415
+ I +++GAGGA + +A K + + NR R + ++ L
Sbjct: 108 LKQIYEGIEDAYILILGAGGASKGIANELYKIVRPTLTVANRTMSRFNNWSLNINKINLS 167
Query: 416 HFE-YLHEFFPEKGMILANASAIGMEPNSDQSPVPKEALKAYELVFDAVYTPRNTRLLRE 474
H E +L EF I+ N + GM N+D S + L ++ LV D VY P T +L E
Sbjct: 168 HAESHLDEF-----DIIINTTPAGMNGNTD-SVISLNRLASHTLVSDIVYNPYKTPILIE 221
Query: 475 AAEVGATVVSGVEMFIRQALGQFRLFTGGLAPE-DFMRKLVLEQF 518
A + G + +G++MF+ Q F+++T L P+ M+ +V+++
Sbjct: 222 AEQRGNPIYNGLDMFVHQGAESFKIWT-NLEPDIKAMKNIVIQKL 265
>gi|229597718|pdb|3DON|A Chain A, Crystal Structure Of Shikimate Dehydrogenase From
Staphylococcus Epidermidis
gi|229597719|pdb|3DOO|A Chain A, Crystal Structure Of Shikimate Dehydrogenase From
Staphylococcus Epidermidis Complexed With Shikimate
Length = 277
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 84/285 (29%), Positives = 142/285 (49%), Gaps = 28/285 (9%)
Query: 240 FGLVSNPVGHSKGPILHNPAFRHTRFNGIY--VPMLVDDVKEFFRTYSGTDFAGFSVGIP 297
F ++ NP+ HS P++H+ F+ Y + + V+ ++ + S GF+V IP
Sbjct: 3 FAVIGNPISHSLSPLMHHANFQSLNLENTYEAINVPVNQFQDIKKIISEKSIDGFNVTIP 62
Query: 298 HKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALRERQGING 357
HKE + D+++ AKS+GAVNT++ + DGK +GYNTD +NG
Sbjct: 63 HKERIIPYLDDINEQAKSVGAVNTVLVK--DGKWIGYNTDGIGY-------------VNG 107
Query: 358 VASHTSPIAGKIFVLVGAGGAGRALAFG-AKSRGARVIIFNRNYERAKALADAVSGEAL- 415
+ I +++GAGGA + +A K + + NR R + ++ L
Sbjct: 108 LKQIYEGIEDAYILILGAGGASKGIANELYKIVRPTLTVANRTMSRFNNWSLNINKINLS 167
Query: 416 HFE-YLHEFFPEKGMILANASAIGMEPNSDQSPVPKEALKAYELVFDAVYTPRNTRLLRE 474
H E +L EF I+ N + GM N+D S + L ++ LV D VY P T +L E
Sbjct: 168 HAESHLDEF-----DIIINTTPAGMNGNTD-SVISLNRLASHTLVSDIVYNPYKTPILIE 221
Query: 475 AAEVGATVVSGVEMFIRQALGQFRLFTGGLAPE-DFMRKLVLEQF 518
A + G + +G++MF+ Q F+++T L P+ M+ +V+++
Sbjct: 222 AEQRGNPIYNGLDMFVHQGAESFKIWT-NLEPDIKAMKNIVIQKL 265
>gi|282881812|ref|ZP_06290468.1| shikimate dehydrogenase [Peptoniphilus lacrimalis 315-B]
gi|281298348|gb|EFA90788.1| shikimate dehydrogenase [Peptoniphilus lacrimalis 315-B]
Length = 286
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 86/300 (28%), Positives = 147/300 (49%), Gaps = 33/300 (11%)
Query: 232 HINPDTKIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYV--PMLVDDVKEFFRTYSGTDF 289
+I+ +TK+ GL+ +P+ HS P +HN +F + + +Y+ P D+++ T
Sbjct: 2 NISGNTKLIGLLGDPISHSLSPFMHNLSFNKVKKDYVYLCLPTGKKDLEKVLDTLKIIGA 61
Query: 290 AGFSVGIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPID--GKLVGYNTDCESAISAIED 347
G ++ P+K + DE + IG+ NTI ID K+ GYNTD + ++++
Sbjct: 62 RGANITYPNKIEILKYLDEASEEVQIIGSCNTI---SIDENKKIKGYNTDGRGFVQSLKN 118
Query: 348 ALRERQGINGVASHTSPIAGKIFVLVGAGGAGRALAF-----GAKSRGARVIIFNRNYER 402
++ I GK F ++G GGAG A+A G K + I F++
Sbjct: 119 -------------NSIEIKGKTFGIMGLGGAGSAIATCLGLEGLKRLYVKEIDFDKAKTV 165
Query: 403 AKALADAVSGEALHFEYLHEFFP---EKGMILANASAIGMEPNSDQSPVPKEALKAYELV 459
K L + + G + + F +K ++ NA+ IGM + D SP+ E L+ + L+
Sbjct: 166 KKRLEEKIKGLEIILTKDQQDFAKNLDKMSLVINATPIGMGRSKDDSPMDPEYLRGFPLI 225
Query: 460 -FDAVYTPRNTRLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRKLVLEQF 518
+D +Y+P T LLR+A G V +G++M I Q F ++TG ++ KLV E+
Sbjct: 226 IYDVIYSPLETTLLRKAKSYGLKVFNGIDMMINQGAISFNIWTG----QEMDTKLVKERI 281
>gi|116494035|ref|YP_805769.1| shikimate 5-dehydrogenase [Lactobacillus casei ATCC 334]
gi|418001101|ref|ZP_12641265.1| shikimate/quinate 5-dehydrogenase I beta [Lactobacillus casei
UCD174]
gi|116104185|gb|ABJ69327.1| shikimate dehydrogenase [Lactobacillus casei ATCC 334]
gi|410548343|gb|EKQ22546.1| shikimate/quinate 5-dehydrogenase I beta [Lactobacillus casei
UCD174]
Length = 296
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 91/289 (31%), Positives = 136/289 (47%), Gaps = 30/289 (10%)
Query: 233 INPDTKIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLV--DDVKEFFRTYSGTDFA 290
I+ T + L+ +PVGHS P ++N +F+ + + YV V + + E
Sbjct: 5 ISGTTGLLCLLGSPVGHSGSPAMYNFSFQKQKIDAAYVAFDVTKEQMPEALNAMRLFKMR 64
Query: 291 GFSVGIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALR 350
G +V +P K A DE+ P AK IGAVN ++ DGKL+G+ TD + +++
Sbjct: 65 GGNVTMPCKNVAATLMDELSPAAKIIGAVNVVVND--DGKLIGHITDGIGFVRNLQE--- 119
Query: 351 ERQGINGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGARVI-IFNRN---YERAKAL 406
H I GK V++GAGGA A+ A GA+ I IFNR Y RA++
Sbjct: 120 ----------HGIDIKGKHLVVLGAGGAATAIQVQAALDGAKQITIFNRQDEFYSRAEST 169
Query: 407 AD-------AVSGEALHFEYLHEFFPE--KGMILANASAIGMEPNSDQSPVPKEALKAYE 457
A AV + + E IL NA+ +GM+P+ S V L+A
Sbjct: 170 AKKLAEAAPAVKVDVVQLENTDRLKAAIADADILVNATTVGMKPDDGVSLVDPSFLRADL 229
Query: 458 LVFDAVYTPRNTRLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAP 506
+V D VY P T+L+ +A + GA G M + Q ++L+TG P
Sbjct: 230 VVADTVYNPLKTKLIEDAEKAGAKTAPGKGMLLWQGAAGYQLWTGQDMP 278
>gi|417659556|ref|ZP_12309156.1| shikimate dehydrogenase [Staphylococcus epidermidis VCU045]
gi|417908509|ref|ZP_12552266.1| shikimate dehydrogenase [Staphylococcus epidermidis VCU037]
gi|418605463|ref|ZP_13168787.1| shikimate dehydrogenase [Staphylococcus epidermidis VCU041]
gi|420183257|ref|ZP_14689390.1| shikimate dehydrogenase [Staphylococcus epidermidis NIHLM049]
gi|420194893|ref|ZP_14700690.1| shikimate dehydrogenase [Staphylococcus epidermidis NIHLM021]
gi|420214055|ref|ZP_14719335.1| shikimate dehydrogenase [Staphylococcus epidermidis NIH05005]
gi|420216205|ref|ZP_14721421.1| shikimate dehydrogenase [Staphylococcus epidermidis NIH05001]
gi|420220541|ref|ZP_14725500.1| shikimate dehydrogenase [Staphylococcus epidermidis NIH04008]
gi|420221619|ref|ZP_14726546.1| shikimate dehydrogenase [Staphylococcus epidermidis NIH08001]
gi|420225792|ref|ZP_14730619.1| shikimate dehydrogenase [Staphylococcus epidermidis NIH06004]
gi|420229699|ref|ZP_14734404.1| shikimate dehydrogenase [Staphylococcus epidermidis NIH04003]
gi|420232110|ref|ZP_14736752.1| shikimate dehydrogenase [Staphylococcus epidermidis NIH051668]
gi|420234757|ref|ZP_14739317.1| shikimate dehydrogenase [Staphylococcus epidermidis NIH051475]
gi|329735193|gb|EGG71485.1| shikimate dehydrogenase [Staphylococcus epidermidis VCU045]
gi|341655870|gb|EGS79593.1| shikimate dehydrogenase [Staphylococcus epidermidis VCU037]
gi|374402352|gb|EHQ73382.1| shikimate dehydrogenase [Staphylococcus epidermidis VCU041]
gi|394249720|gb|EJD94933.1| shikimate dehydrogenase [Staphylococcus epidermidis NIHLM049]
gi|394263953|gb|EJE08674.1| shikimate dehydrogenase [Staphylococcus epidermidis NIHLM021]
gi|394283977|gb|EJE28138.1| shikimate dehydrogenase [Staphylococcus epidermidis NIH05005]
gi|394285894|gb|EJE29960.1| shikimate dehydrogenase [Staphylococcus epidermidis NIH04008]
gi|394290245|gb|EJE34109.1| shikimate dehydrogenase [Staphylococcus epidermidis NIH08001]
gi|394292295|gb|EJE36054.1| shikimate dehydrogenase [Staphylococcus epidermidis NIH05001]
gi|394293226|gb|EJE36949.1| shikimate dehydrogenase [Staphylococcus epidermidis NIH06004]
gi|394298993|gb|EJE42548.1| shikimate dehydrogenase [Staphylococcus epidermidis NIH04003]
gi|394301832|gb|EJE45286.1| shikimate dehydrogenase [Staphylococcus epidermidis NIH051668]
gi|394304000|gb|EJE47410.1| shikimate dehydrogenase [Staphylococcus epidermidis NIH051475]
Length = 269
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 84/285 (29%), Positives = 142/285 (49%), Gaps = 28/285 (9%)
Query: 240 FGLVSNPVGHSKGPILHNPAFRHTRFNGIY--VPMLVDDVKEFFRTYSGTDFAGFSVGIP 297
F ++ NP+ HS P++H+ F+ Y + + V+ ++ + S GF+V IP
Sbjct: 3 FAVIGNPISHSLSPLMHHANFQSLNLENTYEAINVPVNQFQDIKKIISEKSIDGFNVTIP 62
Query: 298 HKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALRERQGING 357
HKE + D+++ AKS+GAVNT++ + DGK +GYNTD +NG
Sbjct: 63 HKERIIPYLDDINEQAKSVGAVNTVLVK--DGKWIGYNTDGIGY-------------VNG 107
Query: 358 VASHTSPIAGKIFVLVGAGGAGRALAFG-AKSRGARVIIFNRNYERAKALADAVSGEAL- 415
+ I +++GAGGA + +A K + + NR R + ++ L
Sbjct: 108 LKQIYEGIEDAYILILGAGGASKGIANELYKIVRPTLTVANRTMSRFNNWSLNINKINLS 167
Query: 416 HFE-YLHEFFPEKGMILANASAIGMEPNSDQSPVPKEALKAYELVFDAVYTPRNTRLLRE 474
H E +L EF I+ N + GM N+D S + L ++ LV D VY P T +L E
Sbjct: 168 HAESHLDEF-----DIIINTTPAGMNGNTD-SVISLNRLASHTLVSDIVYNPYKTPILIE 221
Query: 475 AAEVGATVVSGVEMFIRQALGQFRLFTGGLAPE-DFMRKLVLEQF 518
A + G + +G++MF+ Q F+++T L P+ M+ +V+++
Sbjct: 222 AEQRGNPIYNGLDMFVHQGAESFKIWT-NLEPDIKAMKNIVIQKL 265
>gi|242242874|ref|ZP_04797319.1| shikimate dehydrogenease [Staphylococcus epidermidis W23144]
gi|418615660|ref|ZP_13178599.1| shikimate dehydrogenase [Staphylococcus epidermidis VCU118]
gi|418633499|ref|ZP_13195912.1| shikimate dehydrogenase [Staphylococcus epidermidis VCU129]
gi|420174638|ref|ZP_14681087.1| shikimate dehydrogenase [Staphylococcus epidermidis NIHLM061]
gi|420190210|ref|ZP_14696154.1| shikimate dehydrogenase [Staphylococcus epidermidis NIHLM037]
gi|420192347|ref|ZP_14698207.1| shikimate dehydrogenase [Staphylococcus epidermidis NIHLM023]
gi|420204514|ref|ZP_14710072.1| shikimate dehydrogenase [Staphylococcus epidermidis NIHLM015]
gi|242233649|gb|EES35961.1| shikimate dehydrogenease [Staphylococcus epidermidis W23144]
gi|374816710|gb|EHR80909.1| shikimate dehydrogenase [Staphylococcus epidermidis VCU118]
gi|374839252|gb|EHS02770.1| shikimate dehydrogenase [Staphylococcus epidermidis VCU129]
gi|394244869|gb|EJD90201.1| shikimate dehydrogenase [Staphylococcus epidermidis NIHLM061]
gi|394259101|gb|EJE03971.1| shikimate dehydrogenase [Staphylococcus epidermidis NIHLM037]
gi|394261558|gb|EJE06355.1| shikimate dehydrogenase [Staphylococcus epidermidis NIHLM023]
gi|394273524|gb|EJE17955.1| shikimate dehydrogenase [Staphylococcus epidermidis NIHLM015]
Length = 269
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 87/287 (30%), Positives = 144/287 (50%), Gaps = 32/287 (11%)
Query: 240 FGLVSNPVGHSKGPILHNPAFR----HTRFNGIYVPMLVDDVKEFFRTYSGTDFAGFSVG 295
F ++ NP+ HS P++H+ F+ + + I VP V+ +++ + S GF+V
Sbjct: 3 FAVIGNPISHSLSPLMHHANFQSLNLESTYEAINVP--VNQLQDIKKIISEKGIDGFNVT 60
Query: 296 IPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALRERQGI 355
IPHKE + D+++ AKS+GAVNT++ + DGK +GYNTD +
Sbjct: 61 IPHKERIIPYLDDINEQAKSVGAVNTVLIK--DGKWIGYNTDGIGY-------------V 105
Query: 356 NGVASHTSPIAGKIFVLVGAGGAGRALAFG-AKSRGARVIIFNRNYERAKALADAVSGEA 414
NG+ I +++GAGGA + +A K + I NR R + ++
Sbjct: 106 NGLKQIYEGIEDAYILILGAGGASKGIANELYKIVRPTITIANRTMSRFNNWSLNINKIN 165
Query: 415 L-HFE-YLHEFFPEKGMILANASAIGMEPNSDQSPVPKEALKAYELVFDAVYTPRNTRLL 472
L H E +L EF I+ N + GM N D S + L ++ LV D VY P T +L
Sbjct: 166 LSHAERHLDEF-----DIIINTTPAGMYGNKD-SVISLNRLASHTLVSDIVYNPYKTPIL 219
Query: 473 REAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPE-DFMRKLVLEQF 518
EA + G + +G++MF+ Q F+++T L P+ + M+ +V+ +
Sbjct: 220 IEAEQKGNPIYNGLDMFVHQGAESFKIWT-NLEPDIEAMKNVVIHEL 265
>gi|417794869|ref|ZP_12442104.1| shikimate dehydrogenase [Streptococcus oralis SK255]
gi|334266731|gb|EGL85203.1| shikimate dehydrogenase [Streptococcus oralis SK255]
Length = 284
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 91/300 (30%), Positives = 150/300 (50%), Gaps = 41/300 (13%)
Query: 237 TKIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLVD--DVKEFFRTYSGTDFAGFSV 294
T++ +V+NP+ HS P +HN AF T NG+YV ++ D+ E G ++
Sbjct: 7 TRLAAVVANPIKHSISPFIHNRAFEATATNGVYVAWEIEAGDLAETVANIRRYQMFGINL 66
Query: 295 GIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALRERQG 354
+P+KE + DE+ A+ IGAVNT++ + DG L+GYNTD + ++
Sbjct: 67 SMPYKEQVIPYLDELSDEARLIGAVNTVVNQ--DGTLIGYNTDGKGFFKSL--------- 115
Query: 355 INGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRG-ARVIIFNR--NYERAKALADAVS 411
S T I+ K ++GAGGA +++ A G +++ +F R + ++ + D +
Sbjct: 116 ----PSFT--ISDKKMTILGAGGAAKSILAQAILDGISQISVFVRSVSMKKTRPYLDKLQ 169
Query: 412 GEA------LHFEYLHEFFPE--KGMILANASAIGMEPNSDQSPVPK-----EALKAYEL 458
+ E L E + K +L NA+++GM+ S SPVP+ EAL L
Sbjct: 170 EQTGFKVDLYALEDLSELQEKIAKSDLLVNATSVGMDGQS--SPVPESINLPEAL----L 223
Query: 459 VFDAVYTPRNTRLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRKLVLEQF 518
V D +Y P T L+ A G V+G+ M + QA F+L+TG P D + + + E++
Sbjct: 224 VADIIYQPFETPFLKWARSQGNPAVNGLGMLLYQAAEAFQLWTGKEMPTDEIWQSLTEKY 283
>gi|302418918|ref|XP_003007290.1| pentafunctional AROM polypeptide [Verticillium albo-atrum VaMs.102]
gi|327507675|sp|C9SE96.1|ARO1_VERA1 RecName: Full=Pentafunctional AROM polypeptide; Includes: RecName:
Full=3-dehydroquinate synthase; Short=DHQS; Includes:
RecName: Full=3-phosphoshikimate
1-carboxyvinyltransferase; AltName:
Full=5-enolpyruvylshikimate-3-phosphate synthase;
Short=EPSP synthase; Short=EPSPS; Includes: RecName:
Full=Shikimate kinase; Short=SK; Includes: RecName:
Full=3-dehydroquinate dehydratase;
Short=3-dehydroquinase; Includes: RecName: Full=Shikimate
dehydrogenase
gi|261354892|gb|EEY17320.1| pentafunctional AROM polypeptide [Verticillium albo-atrum VaMs.102]
Length = 1574
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 133/509 (26%), Positives = 221/509 (43%), Gaps = 63/509 (12%)
Query: 32 VEGADLVELCIDSMEF----SHISEVDKLIQHPTLPAIVSYRLKSSRKSSDEACKNTCLQ 87
V G+D VEL +D ++ S +V L +P I + R S +A L
Sbjct: 1069 VVGSDAVELRVDLLQDQTPESVARQVSALRSAAGMPIIFTLRTVSQGGCFPDADHTQALS 1128
Query: 88 VLRRALDLDVEFVEMDYEVASDPLMSEIIYSRSNTKIIVS--------SYLNGGGKPTTE 139
+ AL + VEF++++ + ++ + + ++II S S+ NG P
Sbjct: 1129 LYILALRMGVEFIDLEM-TWPEHILQTVTNLKGRSRIIASHHDPRGELSWKNGSWTPFYN 1187
Query: 140 KLGDVIACMQATGADVMKLEIAVDSITDLAPV-FEMLTHCQVPLIALAVGSRGLISQLLG 198
+ A + ++ +++ DLA +ML P+IAL +G+ G +S++L
Sbjct: 1188 R-----ALQWGSVIKLVGTAQSMEDNYDLARFKSDMLASHPTPVIALNMGALGKLSRVLN 1242
Query: 199 PKFGGFLV---YGSLGGKSVPGLPTLVSLKQ-VYQLEHINPDTKIFGLVSNPVGHSKGPI 254
GFL + +L K+ PG + +++ ++ L +IN + F L P+ S+ P
Sbjct: 1243 ----GFLTPVSHPALPFKAAPGQLSAAEIRRALFLLGNINAQS--FHLFGKPISKSRSPA 1296
Query: 255 LHNPAFRHTRFNGIYVPMLVDDVKEFFRTYSGTDFAGFSVGIPHKEPAVACCDEVHPLAK 314
LHN F T Y + D E DF G SV IP K + DEV AK
Sbjct: 1297 LHNSLFNLTGLPHKYGLVETDQADEVAAVIREPDFGGASVTIPLKLDVMPLLDEVSESAK 1356
Query: 315 SIGAVNTIIRRPIDG----KLVGYNTDCESAISAIEDALRERQGINGVASHTSPIAGKIF 370
IGAVNTII P+DG +L+G NTD + +E I + T+
Sbjct: 1357 VIGAVNTIIPMPLDGSQKRRLLGDNTDWRGMVHCLES-------IGVASESTASTTTASA 1409
Query: 371 VLVGAGGAGRALAFGAKSRGARVI-IFNRNYERAKALADAVSGEALHFEYLHEFFPEKGM 429
+++G+GG RA F KS G I + RN + + + + + F+ P +
Sbjct: 1410 LVIGSGGTTRAAIFALKSHGYHPIYMLARNEQSLETIRASFPTD---FDLRALGGPAEVF 1466
Query: 430 ILANASAI---------GMEPNSDQ-------SPVPKEALKAYELVFDAVYTPRNTRLLR 473
LA A + M+P+ + SPV ++ + ++ + Y PR+T +R
Sbjct: 1467 TLAVAPTVVISTIPADKPMDPSLRETLEVVLKSPVSEQRTR---VLLEMAYQPRHTAAMR 1523
Query: 474 EAAEVGATVVSGVEMFIRQALGQFRLFTG 502
A + G + G E+ Q QF+++TG
Sbjct: 1524 LAEDAGWRTIPGAEVLAAQGWHQFQMWTG 1552
>gi|403414545|emb|CCM01245.1| predicted protein [Fibroporia radiculosa]
Length = 1621
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 123/488 (25%), Positives = 210/488 (43%), Gaps = 35/488 (7%)
Query: 52 EVDKLIQHPTLPAIVSYRLKSSRKSSDEACKNTCLQVLRRALDLDVEFVEMDYEVASDPL 111
++ L Q +LP + + R S + ++ A + VE+++++ S+
Sbjct: 1144 QIAALRQKTSLPIVFTTRTISQGGQFPPHAEAEAFELFHAAARMGVEYIDVEIS-WSEKR 1202
Query: 112 MSEIIYSRSNTKIIVSSYLNGGGKPTTEKLGDVIACMQATGADVMKLEIAVDSITDLAPV 171
+ E++ + ++ II S + G K + + + D++K+ + D +
Sbjct: 1203 IQELVARKGHSVIIASWHDWSGNMLWDGKEVEAKYQIASKFGDIVKIVGKANGFEDNLAL 1262
Query: 172 FEMLTHCQV-----PLIALAVGSRGLISQLLGPKFGGFLVYGSLGGKSVPGLPTLVSLKQ 226
Q PLI + +G G +S++L P + + L K+ PG + ++
Sbjct: 1263 HRFAKRMQSSTNGKPLIGINMGVEGQLSRILNPTLSP-VSHPLLPSKAAPGQLSFAEIQT 1321
Query: 227 VYQLEHINPDTKIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLVDDVKEFFRT-YS 285
L +P + F + NP+ HS P LHN AF+ Y V E +
Sbjct: 1322 ALHLIGQSPAQR-FYIFGNPIAHSMSPTLHNTAFQILGLPHKYELFETQSVGEEIKAALV 1380
Query: 286 GTDFAGFSVGIPHKEPAVACCDEVHPLAKSIGAVNTII-RRPIDGK--LVGYNTDCESAI 342
DF G SV IP K + D + P A++IGAVNTI+ R+ +G L G NTD +
Sbjct: 1381 SPDFGGASVTIPFKLDVIPLLDSLSPEAEAIGAVNTIVPRKKSNGSPLLYGDNTDWIGIL 1440
Query: 343 SAIEDALRERQGINGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGARVI-IFNRNYE 401
I AL + +P A +++GAGG RA + + G + I ++NR +
Sbjct: 1441 ECIRSALPN--------TAQTPDAA---LIIGAGGTSRAAIYALRQLGVKAIYLYNRTRQ 1489
Query: 402 RAKALADAVSGEALHFEYLHEFFPEKG----MILAN--ASAIGMEPNSDQSPVPKEALKA 455
A+ L +A + +PE G +I++ ASA PN + + ++ A
Sbjct: 1490 SAEVLVNAFPDAGVVIIDELGTWPEGGRPPTVIISTVPASATSTSPNVENTLYLPSSIFA 1549
Query: 456 YE---LVFDAVYTPRNTRLLREAAEVGATV--VSGVEMFIRQALGQFRLFTGGLAPEDFM 510
+ +V D Y P T LL AA+V V GVE+ + Q QF L+TG P+ +
Sbjct: 1550 SQYPGVVVDMAYKPAETPLLGLAADVAQKWNRVRGVEVLLEQGFKQFYLWTGRRCPKRAV 1609
Query: 511 RKLVLEQF 518
+ V +
Sbjct: 1610 SERVWNAY 1617
>gi|225376085|ref|ZP_03753306.1| hypothetical protein ROSEINA2194_01722 [Roseburia inulinivorans DSM
16841]
gi|225212105|gb|EEG94459.1| hypothetical protein ROSEINA2194_01722 [Roseburia inulinivorans DSM
16841]
Length = 303
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 91/291 (31%), Positives = 136/291 (46%), Gaps = 15/291 (5%)
Query: 231 EHINPDTKIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLV--DDVKEFFRTYSGTD 288
+ I+ T + L+ +PVGHS P ++N +F + YV + D VK+ +
Sbjct: 17 KRISGHTGLLALIGSPVGHSGSPAMYNYSFEKLGLDYAYVAFDIKEDKVKDAIAAMKTFN 76
Query: 289 FAGFSVGIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDA 348
G +V +P K A DE+ P A+ IGAVNTI+ +GKL G+ TD E + + D
Sbjct: 77 MRGCNVTMPDKVEAAKYMDELSPAAQIIGAVNTIVND--NGKLTGHITDGEGFVHNLRDH 134
Query: 349 LRERQGINGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGARVIIFNRNYERAKALAD 408
E +G + A I V GA F K F R + A+ +
Sbjct: 135 GIEIKGKKITVAGGGGAATAIQVQCALDGAREISIFNIKDA-----FFERTLQTAEKIRK 189
Query: 409 AVSGEALHFEYLHEFFP-----EKGMILANASAIGMEPNSDQSPVPK-EALKAYELVFDA 462
AV ++ + + + I ANA+ +GM+P DQS V A + +V DA
Sbjct: 190 AVPECVVNVYDIADTAKMTEEIQSSDIFANATIVGMKPMDDQSVVKDLSAFRPGLVVADA 249
Query: 463 VYTPRNTRLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRKL 513
VY P T+LLREA E G T + G M + Q + F+L+TG P + ++KL
Sbjct: 250 VYNPEETKLLREAKEAGCTCIGGKGMLLWQGVAAFKLYTGQDMPVEDVKKL 300
>gi|312865146|ref|ZP_07725374.1| shikimate dehydrogenase [Streptococcus downei F0415]
gi|311099257|gb|EFQ57473.1| shikimate dehydrogenase [Streptococcus downei F0415]
Length = 288
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 93/295 (31%), Positives = 142/295 (48%), Gaps = 38/295 (12%)
Query: 232 HINPDTKIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLV--DDVKEFFRTYSGTDF 289
I+ T++ +V+ P+ HS P +HN AF + NG+YV + +D++E + D
Sbjct: 2 QIDGHTRMAAVVARPIRHSISPFIHNYAFDASGINGVYVAWDIPEEDLEESVQNVRRYDM 61
Query: 290 AGFSVGIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDAL 349
G ++ +P+K+ + DE+ A+ IGAVNT++ R G+L+GYNTD A+E
Sbjct: 62 FGINISMPYKQVVIPFLDELDQAAELIGAVNTVVNR--QGRLIGYNTDGYGFFKALE--- 116
Query: 350 RERQGINGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGARVI-IFNRNY----ERAK 404
+ G IAGK ++G GGA +L A GA+ I IFN+ AK
Sbjct: 117 -KDDGFT--------IAGKTMTILGGGGAATSLIVQAALDGAKKINIFNQTQFLEETEAK 167
Query: 405 AL----ADAVSGEALHFEYLHEFFPEK---GMILANASAIGMEPNS----DQSPVPKEAL 453
A A V+ E E + EK +L NA+++GM+ S D + +P L
Sbjct: 168 AQKYEEATGVTLEVFPVEN-QDLIQEKILESQLLVNATSVGMDGKSMVLADDTELPA-GL 225
Query: 454 KAYELVFDAVYTPRNTRLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPED 508
+ V D +Y P T L A G +G+ M + QA F+L+TG P D
Sbjct: 226 R----VADTIYQPFETSFLAYARSKGLKASNGLGMLLYQAAKSFQLWTGSQMPTD 276
>gi|352517570|ref|YP_004886887.1| shikimate dehydrogenase [Tetragenococcus halophilus NBRC 12172]
gi|348601677|dbj|BAK94723.1| shikimate dehydrogenase [Tetragenococcus halophilus NBRC 12172]
Length = 287
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 87/290 (30%), Positives = 141/290 (48%), Gaps = 32/290 (11%)
Query: 232 HINPDTKIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLVDD--VKEFFRTYSGTDF 289
IN T++ G + P HS P + + AF+ T + IY+ + + ++E R+ +
Sbjct: 4 QINGKTRLVGFFACPAQHSLSPKIQSLAFQLTNSDAIYLAFEIQEGQIEEALRSIFTFNM 63
Query: 290 AGFSVGIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDAL 349
G +V +PHK + D IGA NTI+ R D KL GYNTD + +++ A
Sbjct: 64 LGANVSMPHKNTVLQYLDHYSKSCHLIGAANTIVLR--DKKLFGYNTDGIGFMQSLQSA- 120
Query: 350 RERQGINGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRG-ARVIIFNRNYERAKALAD 408
GIN GK ++GAGGA A+ A G ++ IF+R R + + +
Sbjct: 121 ----GIN--------YKGKTMTILGAGGAATAMVCQAALEGVTKIHIFSRAGPRFEQMKE 168
Query: 409 AVSGEALHFE---YLHEFFPEKGM--------ILANASAIGMEPNSDQSPVPKEALKAYE 457
V G L+ F+ ++ IL NA++IGM+ N +SP+ ++ +
Sbjct: 169 KVKGMQRQTSCSVTLNNFYDDERFKKAVANSDILVNATSIGMKEN--ESPINDFSVIRED 226
Query: 458 LV-FDAVYTPRNTRLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAP 506
LV +DA+Y PR + LL++A + GA ++G+ M + Q F L+T P
Sbjct: 227 LVVYDAIYQPRESYLLKQAKKQGARTLNGLGMLLYQGAASFELWTHKKMP 276
>gi|417647121|ref|ZP_12296970.1| shikimate dehydrogenase [Staphylococcus epidermidis VCU144]
gi|420184568|ref|ZP_14690677.1| shikimate dehydrogenase [Staphylococcus epidermidis NIHLM040]
gi|329725470|gb|EGG61953.1| shikimate dehydrogenase [Staphylococcus epidermidis VCU144]
gi|394257219|gb|EJE02141.1| shikimate dehydrogenase [Staphylococcus epidermidis NIHLM040]
Length = 269
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 84/285 (29%), Positives = 142/285 (49%), Gaps = 28/285 (9%)
Query: 240 FGLVSNPVGHSKGPILHNPAFRHTRFNGIY--VPMLVDDVKEFFRTYSGTDFAGFSVGIP 297
F ++ NP+ HS P++H+ F+ Y + + V+ ++ + S GF+V IP
Sbjct: 3 FAVIGNPISHSLSPLMHHANFQSLNLENTYEAINVPVNQFQDIKKIISEKSIDGFNVTIP 62
Query: 298 HKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALRERQGING 357
HKE + D+++ AKS+GAVNT++ + DGK +GYNTD +NG
Sbjct: 63 HKERIIPYLDDINEQAKSVGAVNTVLVK--DGKWIGYNTDGIGY-------------VNG 107
Query: 358 VASHTSPIAGKIFVLVGAGGAGRALAFG-AKSRGARVIIFNRNYERAKALADAVSGEAL- 415
+ I +++GAGGA + +A K + + NR R + ++ L
Sbjct: 108 LKQIYEGIEDAYILILGAGGASKGIANELYKIVRPTLTVANRTMSRFNNWSLNINKINLS 167
Query: 416 HFE-YLHEFFPEKGMILANASAIGMEPNSDQSPVPKEALKAYELVFDAVYTPRNTRLLRE 474
H E +L EF I+ N + GM N+D S + L ++ LV D VY P T +L E
Sbjct: 168 HAERHLDEF-----DIIINTTPAGMNGNTD-SVISLNRLASHTLVSDIVYNPYKTPILIE 221
Query: 475 AAEVGATVVSGVEMFIRQALGQFRLFTGGLAPE-DFMRKLVLEQF 518
A + G + +G++MF+ Q F+++T L P+ + M+ +V+ +
Sbjct: 222 AEQRGNPIYNGLDMFVHQGAESFKIWT-NLEPDIEAMKNIVIHKL 265
>gi|365170138|ref|ZP_09361040.1| shikimate 5-dehydrogenase [Synergistes sp. 3_1_syn1]
gi|363618206|gb|EHL69559.1| shikimate 5-dehydrogenase [Synergistes sp. 3_1_syn1]
Length = 301
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 93/290 (32%), Positives = 142/290 (48%), Gaps = 26/290 (8%)
Query: 233 INPDTKIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLVD--DVKEFFRTYSGTDFA 290
I+ +TK+ L+ P+GHS +HN A+ + +Y+P+ V+ +V+E F
Sbjct: 11 ISVNTKLAALIGWPLGHSASAEMHNDAYAAMGLDALYLPLPVEPRNVEEAVGAMETMGFM 70
Query: 291 GFSVGIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALR 350
G +V IPHK DE+HP A GAVNT++ + +G+ VGYNTD + A L+
Sbjct: 71 GCNVTIPHKVVVKELMDELHPSAAESGAVNTVLFK--EGRKVGYNTDGTGFVHA----LK 124
Query: 351 ERQGINGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGARVIIFNR--NYERAKALAD 408
E+ G + P + ++ G A + A + A+ I NR YE A+ LAD
Sbjct: 125 EKGGFD-------PAGKRCLMIGAGGAARGVASALAIAGAAKFFIANRAEEYEMAERLAD 177
Query: 409 AVS----GEA----LHFEYLHEFFPEKGMILANASAIGMEPNSDQSPVPKEALKAYELVF 460
++ G A L + + E E ++ +A+ +GM PN + L V
Sbjct: 178 DMNALRHGTAAPLVLDEKNVGEALAEADFVV-HATRLGMRPNEETVAFDTSLLSPRHFVC 236
Query: 461 DAVYTPRNTRLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFM 510
D VY+PR TRLLREAA +G + G+ M + Q R++TG P D M
Sbjct: 237 DVVYSPRETRLLREAAALGCRTLDGMWMLVYQGAEAVRIWTGLEPPVDVM 286
>gi|347759240|ref|YP_004866801.1| shikimate 5-dehydrogenase [Gluconacetobacter xylinus NBRC 3288]
gi|347578210|dbj|BAK82431.1| shikimate 5-dehydrogenase [Gluconacetobacter xylinus NBRC 3288]
Length = 300
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 103/280 (36%), Positives = 146/280 (52%), Gaps = 24/280 (8%)
Query: 233 INPDTKIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLV--DDVKEFFRTYSGTDFA 290
I+ T + G++ PV HS+ P++HN NG YVP+ V D R F
Sbjct: 16 IDGHTLLAGVIGWPVAHSRSPLMHNWWLAQCGVNGAYVPLPVAPDQFDTAVRGLQAAGFR 75
Query: 291 GFSVGIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALR 350
G +V IPHKE A D +H A+ G+VNT++ DG++ GY+TD + ++ +E
Sbjct: 76 GVNVTIPHKESAYRIVDRLHRSAQRSGSVNTLVFSS-DGRIEGYSTDGDGFVANVE---- 130
Query: 351 ERQGINGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGARVIIFNRNYERAKALADAV 410
+H + G +L+GAGGA RA+A RG RV++ NR RA ALA ++
Sbjct: 131 ---------AHGVAVKGGSALLLGAGGAARAIAASLLDRGVRVVVANRTRARADALAASL 181
Query: 411 SG-EALHFEYLHEFFPEKGMILANASAIGMEPNSDQSPVPKEALKAY-ELVF-DAVYTPR 467
+G EA+ + P M L N ++IGME + Q+ P + +A ELV D VY PR
Sbjct: 182 AGVEAIDWAQAGSALPGSTM-LVNTTSIGME-GAAQAQFPLDLAQADPELVVCDIVYVPR 239
Query: 468 NTRLLREAAEVGATVVSGVEMFIRQA-LGQFRLFTGGLAP 506
T LL+ AA G V G+ M I QA LG + F G+AP
Sbjct: 240 QTALLKWAAANGLRTVDGLGMLIHQAGLGFEKWF--GVAP 277
>gi|392563015|gb|EIW56195.1| aromatic amino acid family biosynthesis-like protein [Trametes
versicolor FP-101664 SS1]
Length = 1616
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 130/498 (26%), Positives = 221/498 (44%), Gaps = 46/498 (9%)
Query: 48 SHISEVDKLIQHPT-LPAIVSYRLKSSRKSSDEACKNTCLQVLRRALDLDVEFVEMDYEV 106
S+++E ++H T LP I + R S + + ++ A+ L VE+++++
Sbjct: 1134 SYVTEQITALRHKTRLPLIFTVRTVSQGGQFPDHAEKEAFELFLTAVRLGVEYIDVEIS- 1192
Query: 107 ASDPLMSEIIYSRSNTKIIVSSY-----LNGGGKPTTEKLGDVIACMQATGADVMKLEIA 161
++ + +++ + ++KII S + ++ GGKP K + D++K+
Sbjct: 1193 WTEKNIQDLVSRKGHSKIIASWHDWSGNMHWGGKPVEAK-----HQLAHRFGDIVKIVGK 1247
Query: 162 VDSITDLAPVFEMLTHCQV-----PLIALAVGSRGLISQLLGPKFGGFLVYGSLGGKSVP 216
+++ D + + Q P+IAL +G G +S++L F + + L K+ P
Sbjct: 1248 ANALEDNFALHNFVLRTQAVSGAKPIIALNMGVEGQMSRILNSTFSP-VTHPLLPSKAAP 1306
Query: 217 GLPTLVSLKQVYQLEHINPDTKIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLVDD 276
G + ++ L P K + L P+ HS P LHN AF Y +
Sbjct: 1307 GQLSFAQIQTALHLLGQLPAKKFY-LFGTPIAHSMSPTLHNTAFEALGLPHKYELLETAT 1365
Query: 277 VKEFFRT-YSGTDFAGFSVGIPHKEPAVACCDEVHPLAKSIGAVNTII-RRPIDG--KLV 332
V E + + DF G SV IP K + D + A+ IGAVNT+I ++ DG L
Sbjct: 1366 VGEEIKAAITAPDFGGASVTIPFKRDIIPLLDGLSADAEIIGAVNTVIPQKREDGSLSLY 1425
Query: 333 GYNTDCESAISAIEDALRERQGINGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGAR 392
G NTD +I+ +L QGI +P A +++GAGG RA + G +
Sbjct: 1426 GDNTDWRGITHSIQRSL--PQGI------LTPEAA---LVIGAGGTSRAAIYALWKLGIQ 1474
Query: 393 VI-IFNRNYERAKALADAVSGEALHFEYLHEFFPEKG----MILAN--ASAIGMEPNSDQ 445
I + NR A+ L A + +P G ++++ ASA ++ ++
Sbjct: 1475 TIYLINRTRGSAETLVAAFPDAKIQLVEELGVWPNGGPAPTVVISTVPASATSLDSSATN 1534
Query: 446 SPVPKEALKAYE---LVFDAVYTPRNTRLLREAAEVGA--TVVSGVEMFIRQALGQFRLF 500
+ AL A +V D Y P +T LL AA VG V GVE+ + Q Q L+
Sbjct: 1535 ALYLPRALFAATKGGVVVDMAYKPADTPLLLLAANVGTHWRTVKGVEVLLEQGYHQLHLW 1594
Query: 501 TGGLAPEDFMRKLVLEQF 518
TG P+ + + VL+ +
Sbjct: 1595 TGRHCPKGVVAERVLKAY 1612
>gi|154505054|ref|ZP_02041792.1| hypothetical protein RUMGNA_02564 [Ruminococcus gnavus ATCC 29149]
gi|153794533|gb|EDN76953.1| shikimate dehydrogenase [Ruminococcus gnavus ATCC 29149]
Length = 289
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 98/303 (32%), Positives = 146/303 (48%), Gaps = 39/303 (12%)
Query: 232 HINPDTKIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLV--DDVKEFFRTYSGTDF 289
IN T F L+ +PVGHS P ++N +F+ T + +Y+ V D +E
Sbjct: 2 EINGRTGFFCLIGSPVGHSGSPAMYNYSFQKTEQDYVYLAFDVDLDKTEEAVSALKALGC 61
Query: 290 AGFSVGIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDAL 349
G +V +P K DE+ A+ IGA NT++ + DGKL G+NTD I + + L
Sbjct: 62 KGVNVTMPCKTKVAELADELSDAAELIGACNTVVVK--DGKLHGHNTD---GIGFVRN-L 115
Query: 350 RERQGINGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGARVI-IFN------RNYER 402
+E H + + K+ ++GAGGA A+ A GA+ I IFN N E
Sbjct: 116 KE---------HGADVKDKVITVMGAGGAATAIQVQAALEGAKKIYIFNCKDKFYANAEN 166
Query: 403 -AKALADAVSGEALHF------EYLHEFFPEKGMILANASAIGMEPNSDQSPVPKEALKA 455
A+ + + V G + + L+E E IL NA+ GM+P D+S + ++
Sbjct: 167 TARKIENKVPGVTVEVYPLEDSQKLYEKIKESD-ILVNATKSGMKPAEDESLIKDVSVFQ 225
Query: 456 YELVF-DAVYTPRNTRLLREAAEVGATV-VSGVEMFIRQALGQFRLFTGGLAP-----ED 508
+ V DAVY PR T+L+REA G + + G+ M + Q FR+FTG P E
Sbjct: 226 PDFVVADAVYNPRETKLIREAKAAGCKIALGGIGMLLWQGEAAFRIFTGESMPTEEVYER 285
Query: 509 FMR 511
F R
Sbjct: 286 FFR 288
>gi|222529868|ref|YP_002573750.1| shikimate 5-dehydrogenase [Caldicellulosiruptor bescii DSM 6725]
gi|254806728|sp|B9MKW9.1|AROE_ANATD RecName: Full=Shikimate dehydrogenase
gi|222456715|gb|ACM60977.1| shikimate 5-dehydrogenase [Caldicellulosiruptor bescii DSM 6725]
Length = 288
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 85/268 (31%), Positives = 136/268 (50%), Gaps = 30/268 (11%)
Query: 238 KIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLVDD---VKEFFR-TYSGTDFAGFS 293
K+F L+ + HS P +HN + IY + + D +KEF D GF+
Sbjct: 3 KLF-LIGKSLKHSISPFIHNRILSEFDIDAIYSNLELLDTEMLKEFVEMVRKDEDVVGFN 61
Query: 294 VGIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALRERQ 353
+ IP+KE + CDEV + I A NT+ + DGKL+ YNTD ++ED +
Sbjct: 62 ITIPYKEDILEFCDEVSEDVRIIKAANTVKKE--DGKLLAYNTDWIGFKRSLED-----R 114
Query: 354 GINGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGAR-VIIFNRNYERAKALADAVSG 412
G++ + K +++G+GGA +A +G GA+ V + NR YE+A+ L +
Sbjct: 115 GVD--------VKDKKILVLGSGGAAKACIYGLYRMGAKEVFVANRTYEKAEKLKEVFQD 166
Query: 413 --EALHFEYL--HEFFPEKGMILANASAIGMEPNSDQSPVPKEALKAY--ELVFDAVYTP 466
+ L E+L +EF K I+ N +++GM PN + SP E A V+D +Y P
Sbjct: 167 ILKILPVEWLRRYEF---KYDIIINTTSVGMFPNIESSPFDFENYVAGVPVFVYDMIYNP 223
Query: 467 RNTRLLREAAEVGATVVSGVEMFIRQAL 494
T L+EA + G + +G++M + QA+
Sbjct: 224 LKTAFLKEAEKKGIKIENGLKMLVYQAI 251
>gi|425770111|gb|EKV08585.1| Pentafunctional AROM polypeptide [Penicillium digitatum Pd1]
gi|425771658|gb|EKV10095.1| Pentafunctional AROM polypeptide [Penicillium digitatum PHI26]
Length = 1586
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 140/523 (26%), Positives = 228/523 (43%), Gaps = 85/523 (16%)
Query: 34 GADLVELCIDSME----------FSHISE-VDKLIQHPTLPAIVSYRLKSSRKSSDEACK 82
G+D VEL +D + +++E + L + TLP I + R KS +
Sbjct: 1075 GSDAVELRVDLLRDPTVDGDIPSVDYVNEQLSILRRSTTLPLIFTIRTKSQGGRFPDDAH 1134
Query: 83 NTCLQVLRRALDLDVEFVEMDYEVA-SDPLMSEIIYSRSNTKIIVSSYLNGGGKPTTEKL 141
+ +Q+ R A EFV D E+A D ++ + + ++II S + P
Sbjct: 1135 DAAIQLYRLAFRSGCEFV--DLEIAFPDAMLRAVTEMKGYSRIIASHH-----DPMGTLS 1187
Query: 142 GDVIACMQATG-----ADVMKLEIAVDSITDLAPVFEMLTHCQ----VPLIALAVGSRGL 192
++ MQ+ DV+KL +S+ D + + T + VPLIA+ +G G
Sbjct: 1188 WANVSWMQSYNRALEYGDVIKLVGVANSLDDNNALRKFKTWAEEAHDVPLIAINMGDSGQ 1247
Query: 193 ISQLLGPKFGGFLV---YGSLGGKSVPGLPTLVSLKQVYQLEHINPDTKIFGLVSNPVGH 249
+S++L GF+ + SL K+ PG + +++ L K F + +PV
Sbjct: 1248 LSRILN----GFMTPVSHPSLPFKAAPGQLSAAEIRRGLSLMG-EIKAKKFAVFGSPVSG 1302
Query: 250 SKGPILHNPAFRHTRFNGIYVPML---VDDVKEFFRTYSGTDFAGFSVGIPHKEPAVACC 306
S+ P LHN F Y + ++DVK+F R +DF G SV IP K +
Sbjct: 1303 SRSPALHNTLFGKMGLPHEYSRLETTNIEDVKDFIR---ASDFGGASVTIPLKLDIMPLL 1359
Query: 307 DEVHPLAKSIGAVNTIIRRPIDGK---LVGYNTDCESAISAIEDALRERQGINGVASHTS 363
DEV A+ IGAVNTI+ P K L+GYNTD + + + +A G+ G + S
Sbjct: 1360 DEVAQEAEIIGAVNTIVPVPNGDKPPRLIGYNTDWQGMVRCMRNA-----GVYGSTGNES 1414
Query: 364 PIAGKIFVLVGAGGAGRALAFGAKSRG-ARVIIFNRNYERAKALADAVSGEALHFEYLHE 422
V++G GG RA F G + + + R+ A L D VS +++ +
Sbjct: 1415 A------VVIGGGGTARAAIFALHDMGFSPIYVVGRS---ASKLEDMVSTFPINYN-IRV 1464
Query: 423 FFPEKGMILANASAIGMEPNSDQS--PVPKEAL---------------------KAYELV 459
+ AIG P +D+S PV +E L + ++
Sbjct: 1465 VDNRAQLDTVPQVAIGTIP-ADRSIDPVMRETLCHMFERAQEIDGTLIGKSSDASKHRVL 1523
Query: 460 FDAVYTPRNTRLLREAAEVGATVVSGVEMFIRQALGQFRLFTG 502
+ Y P T L++ A++ G T + G+E+ + Q + QF +TG
Sbjct: 1524 LEMAYKPTVTALMQLASDAGWTTIPGLEVLVGQGVYQFVHWTG 1566
>gi|164688249|ref|ZP_02212277.1| hypothetical protein CLOBAR_01894 [Clostridium bartlettii DSM
16795]
gi|164602662|gb|EDQ96127.1| shikimate dehydrogenase [Clostridium bartlettii DSM 16795]
Length = 290
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 92/303 (30%), Positives = 147/303 (48%), Gaps = 30/303 (9%)
Query: 231 EHINPDTKIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLV--DDVKEFFRTYSGTD 288
E I T++ GL++ P+ HS P +HN AF + Y+ V +++++ + +
Sbjct: 3 ERITGHTELIGLIATPIRHSSSPRMHNEAFAKLGLDYAYLAFEVGNEELEDTIKGFRAMK 62
Query: 289 FAGFSVGIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDA 348
G +V +P+K D++ A+ GAVNTI+ DG L G+ TD +S ++DA
Sbjct: 63 VRGSNVSMPNKTVVHKYLDKLSDAAEMCGAVNTIVND--DGVLTGHITDGIGYMSGLKDA 120
Query: 349 LRERQGINGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGARVI-IFNRN---YERAK 404
GI+ I GK +VGAGGA A+ A G + I IFNR YERA+
Sbjct: 121 -----GID--------IIGKKMTIVGAGGAATAIQVQAALDGVKEISIFNRKDEFYERAQ 167
Query: 405 ALADAVSGEA------LHFEYLHEFFPE--KGMILANASAIGMEPNSDQSPVP-KEALKA 455
++ + E L + E I NA+ +GM+P Q+ +P K L+
Sbjct: 168 KTVKDINEKTNCKATLYDLEDLDKLKEEIASSYIFTNATGMGMKPLEGQTYIPDKSFLRE 227
Query: 456 YELVFDAVYTPRNTRLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRKLVL 515
+V D VY P T LL+ A EVG ++G M + Q F+L+T P + +++++
Sbjct: 228 DLIVTDVVYAPAETALLKMAKEVGCKTLNGFPMMLFQGAAAFKLWTNQDMPIEHVKEVMG 287
Query: 516 EQF 518
Q+
Sbjct: 288 IQY 290
>gi|408410402|ref|ZP_11181620.1| Shikimate dehydrogenase [Lactobacillus sp. 66c]
gi|407875433|emb|CCK83426.1| Shikimate dehydrogenase [Lactobacillus sp. 66c]
Length = 310
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 87/297 (29%), Positives = 142/297 (47%), Gaps = 37/297 (12%)
Query: 237 TKIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLVDDVK-----EFFRTYSGTDFAG 291
T + GL++ P+ H+ P +HN AF NG Y+ +D+ K + RT D G
Sbjct: 29 TILVGLMAYPIRHTMSPTMHNNAFAKLGLNGAYLCFEIDNEKLPGAIDAIRTL---DMRG 85
Query: 292 FSVGIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALRE 351
+V +P+K+ + D++ ++ AVNTI+ G L GY TD + ++
Sbjct: 86 SNVSMPNKKKVIPYLDKLDKTSQMCDAVNTIVNDH--GVLTGYTTDGMGWLRSL-----N 138
Query: 352 RQGINGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGARVI-IFNRN---YERAKALA 407
+ G + GK+ L GAGGA +A A GA+ I IFN N +E+A
Sbjct: 139 KDG--------QDVKGKVITLAGAGGAATPIAVTASLSGAKEIRIFNLNDDKWEQAVKNV 190
Query: 408 DAVSGEA------LHFEYLHEFFPE--KGMILANASAIGMEPNSDQSPVPKEALKAYELV 459
D ++ E H E +F + I +A+++GM P DQ+ V + ++V
Sbjct: 191 DTINKETDCVATVHHLEDREDFKKSIAESDIYCDATSVGMNPLQDQTLVDDPSWFHEDMV 250
Query: 460 F-DAVYTPRNTRLLREAAEVGAT-VVSGVEMFIRQALGQFRLFTGGLAPEDFMRKLV 514
D VY PR T+L+ A G + +G+ M I Q F+L+TG P D++++++
Sbjct: 251 VSDTVYAPRKTKLMEVAERAGVKHIYNGIGMMIEQGAAAFKLWTGKEMPTDYIQEIM 307
>gi|406592611|ref|YP_006739791.1| shikimate 5-dehydrogenase [Chlamydia psittaci CP3]
gi|406594387|ref|YP_006741890.1| shikimate 5-dehydrogenase [Chlamydia psittaci MN]
gi|410858665|ref|YP_006974605.1| shikimate 5-dehydrogenase [Chlamydia psittaci 01DC12]
gi|405782819|gb|AFS21567.1| shikimate 5-dehydrogenase [Chlamydia psittaci MN]
gi|405788483|gb|AFS27226.1| shikimate 5-dehydrogenase [Chlamydia psittaci CP3]
gi|410811560|emb|CCO02213.1| shikimate 5-dehydrogenase [Chlamydia psittaci 01DC12]
Length = 477
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 106/413 (25%), Positives = 186/413 (45%), Gaps = 42/413 (10%)
Query: 94 DLDVEFVEMDYEVASDPLMSEIIYSRSNTKIIVSSYLNGGGKPTTEKLGDVIACMQATGA 153
+L E++++D + + L ++I + N KII+S + + T+E + ++ M A
Sbjct: 77 ELQPEYLDIDKDFPKEAL-AKIQKNYPNIKIILSYHSD-----TSEHIPNLCNEMLRRQA 130
Query: 154 DVMKLEIAVDSITDLAPVFEMLTHCQVPLIALAVGSRGLISQLLGPKFGGFLVYGSLGGK 213
K+ I D ++ H L +G+ G+ S++L P + Y S G
Sbjct: 131 HHYKIAITSTKSIDTLRCIQIKQHLPENTTLLCMGNAGIASRILSPLMKNAINYAS--GI 188
Query: 214 SVPGLPT-LVSLKQV--YQLEHINPDTKIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYV 270
+ P + +S++ + Y +++ +++I+GL+ NPV S + HN F + N Y+
Sbjct: 189 NAPKVAQGQLSIEDLLAYNYTNLSSESRIYGLIGNPVDRSISHLSHNKLFSELQLNMSYI 248
Query: 271 PMLVD--DVKEFFRTYSGTDFAGFSVGIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPID 328
+L+ ++ EFF F G SV +P K + D + P + + NT++ R D
Sbjct: 249 KILLTPYELNEFFSLTRDLPFGGLSVTMPFKTDVLEYIDILDPSVQQCQSCNTLVFR--D 306
Query: 329 GKLVGYNTDCESAISAIEDALRERQGINGVASHTSPIAGKIFVLVGAGGAGRALAFGAKS 388
K+ GYNTD ++ L +R+ I H +VG+GG+ +A+A
Sbjct: 307 NKIAGYNTDGLGLLN-----LLKRKNILLQNKHVG--------IVGSGGSAKAIATTFAD 353
Query: 389 RGARVIIFNRNYERAKALADAVSGEALHFEYLHEFFPEKGMILANASAIGMEPNSDQSPV 448
GA++ IFNR A+ L+ G+A L E +IL P
Sbjct: 354 SGAQISIFNRTKTHAEKLSVLCHGQAFPLNALSENHNIDILILC-------------LPP 400
Query: 449 PKEALKAY-ELVFDAVYTPRNTRLLREAAEVGATVVSGVEMFIRQALGQFRLF 500
E + Y ++ D P+ + ++A E G ++ G EMF QAL QF L+
Sbjct: 401 DVEIPEIYPPVIIDINTLPKESLYTKKAKERGCQILYGYEMFAEQALLQFSLW 453
>gi|418620053|ref|ZP_13182864.1| shikimate dehydrogenase [Staphylococcus hominis VCU122]
gi|374823616|gb|EHR87611.1| shikimate dehydrogenase [Staphylococcus hominis VCU122]
Length = 268
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 79/288 (27%), Positives = 142/288 (49%), Gaps = 34/288 (11%)
Query: 240 FGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLV-----DDVKEFFRTYSGTDFAGFSV 294
F ++ +P+ HS P++HN F+ N Y + + D++KE + + +GF++
Sbjct: 3 FAVIGDPISHSLSPVMHNTNFKVLGLNDTYEALHIPVQDFDNIKEII---TEKNLSGFNI 59
Query: 295 GIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDG-KLVGYNTDCESAISAIEDALRERQ 353
IPHKE + D++ AK++GAVNT+ I+G K +GYNTD + ++ +
Sbjct: 60 TIPHKERIIPFLDDIDEQAKAVGAVNTV---KIEGNKWIGYNTDGLGYVKGLKQVYPD-- 114
Query: 354 GINGVASHTSPIAGKIFVLVGAGGAGRALAFG-AKSRGARVIIFNRNYERAKALADAVSG 412
++ +++GAGGA + +A ++ ++ I NR R ++
Sbjct: 115 -----------LSNAYILILGAGGASKGIATALSQCVQPKLTIANRTMSRFDNWKLDINA 163
Query: 413 EALHF--EYLHEFFPEKGMILANASAIGMEPNSDQSPVPKEALKAYELVFDAVYTPRNTR 470
L +YL EF I+ N ++ G++ N+ +S + + L LV D +Y P T
Sbjct: 164 ITLQQAEQYLDEF-----DIIINTTSAGLD-NNKESVIRLDQLSPNTLVSDIIYIPYKTS 217
Query: 471 LLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRKLVLEQF 518
L++A E G + +G++MF+ Q F+++TG A M+ VL Q
Sbjct: 218 FLQQAEEKGNPIYNGLDMFVYQGAESFKIWTGKDAEIKEMKLAVLNQL 265
>gi|399994630|ref|YP_006574870.1| shikimate dehydrogenase [Phaeobacter gallaeciensis DSM 17395 = CIP
105210]
gi|398659185|gb|AFO93151.1| shikimate dehydrogenase AroE [Phaeobacter gallaeciensis DSM 17395 =
CIP 105210]
Length = 277
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 85/273 (31%), Positives = 133/273 (48%), Gaps = 19/273 (6%)
Query: 236 DTKI--FGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLVD--DVKEFFRTYSGTDFAG 291
DT+I G++ +PV HS+ P++H R G YVP+ V+ ++E R+ F G
Sbjct: 3 DTRIPLAGVIGSPVAHSRSPLVHGHWLRTYGIAGHYVPLHVEPGQLEEVVRSLPKMGFVG 62
Query: 292 FSVGIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALRE 351
++ IPHKE + D+V A IGA NT+I RP DG ++ NTD I+ + A +
Sbjct: 63 ANITIPHKEQIMEIADQVTDRATLIGAANTLIFRP-DGSILADNTDGYGFITNLHQAAPD 121
Query: 352 RQGINGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGA-RVIIFNRNYERAKALADAV 410
G A V+ GAGGA RA+ G +++ NR ERA
Sbjct: 122 WDPATGPA-----------VVFGAGGASRAVIASLLEAGVPEILLSNRTRERADQFRSEF 170
Query: 411 SGEALHFEYLH-EFFPEKGMILANASAIGMEPNSDQSPVPKEALKAYELVFDAVYTPRNT 469
+++ E+ +L N +++GM + VP + L++ +V D VYTP T
Sbjct: 171 GSRIQVVDWVQVGNVIEQAALLVNTTSLGMV-GKPRLRVPLDGLRSSTVVTDLVYTPLKT 229
Query: 470 RLLREAAEVGATVVSGVEMFIRQALGQFRLFTG 502
+L+ A ++G T V G+ M + QA+ F + G
Sbjct: 230 DMLQWAEDIGCTTVDGLGMLLHQAVPGFERWFG 262
>gi|302392525|ref|YP_003828345.1| shikimate 5-dehydrogenase [Acetohalobium arabaticum DSM 5501]
gi|302204602|gb|ADL13280.1| shikimate 5-dehydrogenase [Acetohalobium arabaticum DSM 5501]
Length = 292
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 90/295 (30%), Positives = 141/295 (47%), Gaps = 30/295 (10%)
Query: 230 LEHIN-PDTKIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLV--DDVKEFFRTYSG 286
L+H+N + ++ GL PV HS P++HN AF + +Y+P V D++K G
Sbjct: 3 LDHLNLEERELVGLFGYPVKHSLSPVMHNTAFSKLDLDYLYLPFEVEPDNLKAAVEGIRG 62
Query: 287 TDFAGFSVGIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIE 346
+ G ++ IPHKE + D+V A+ IGAVNTI G+L+GYNTD + +++
Sbjct: 63 LNLRGVNLTIPHKEAVIPYLDQVSKEAELIGAVNTIKNEA--GELIGYNTDGRGFVRSLQ 120
Query: 347 DALRERQGINGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGARVIIFNRNYERAKAL 406
+ Q N + A + +G G R+ + NR +++A+ L
Sbjct: 121 EEGFMPQNKNVLIVGAGGAARAVAFQLGLEGV------------ERLYVANRTFKKAEDL 168
Query: 407 ADAVSGEALHFEYLHEFFPEK---------GM-ILANASAIGMEPNSDQSPVPK-EALKA 455
+ + L E + P K G+ +L + + IGM P SD PV + E ++
Sbjct: 169 VSDIK-KGLEMETVQPL-PLKQEKLKKIISGIDLLVDTTPIGMHPESDVEPVIEPELIQP 226
Query: 456 YELVFDAVYTPRNTRLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFM 510
+V D VY P T LL+ A + GA VSG+ M + Q F ++TG AP M
Sbjct: 227 DMVVSDLVYNPVETSLLKAAKDRGAKTVSGLGMLVHQGAISFEIWTGKKAPVKLM 281
>gi|223998716|ref|XP_002289031.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220976139|gb|EED94467.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 611
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 116/358 (32%), Positives = 172/358 (48%), Gaps = 27/358 (7%)
Query: 175 LTHCQVPLIALAVGSRGLISQLLGPKFGGFLVYGSLGGKSVPGLPTLVSLKQVYQLE-HI 233
L ++P I L +G G S++L P+F + + SL K+ PG + + L I
Sbjct: 260 LDDPKIPNIGLILGEDGSFSRILNPRFTP-VTHESLPSKAAPGQLSAAEIMAGRLLTGQI 318
Query: 234 NPDTKIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLVDDVKEFFR--TYSGTDFAG 291
+P+ + ++ + + +S P + AF + Y V+ V+EF ++ +F G
Sbjct: 319 SPER--YAILGHNIAYSVSPQMQGGAFAAVKLPHTYTRADVETVEEFVEGPIWNDDNFGG 376
Query: 292 FSVGIPHKEPAVACCDEVHPLAKSIGAVNTII-RRPIDGK--LVGYNTDCESAISAIEDA 348
SV IPHK+ + D + AK IG+VNT+I ++ G L+G NTD + I +
Sbjct: 377 CSVTIPHKQNIIPHVDVLTDAAKEIGSVNTVIVKKDKFGTRVLIGDNTDWK----GIYNP 432
Query: 349 LRERQG-INGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGARVIIFNRNYERAKALA 407
L+ R G +G S S + +++G GG RA AF A G + FNR E+A+ LA
Sbjct: 433 LQRRLGDSSGKGSQKS-----VALILGGGGTARAAAFAASKLGLERVYFNRTPEKAENLA 487
Query: 408 DAVSGEALH-FEYLHEFFPEKGMILANASA-----IGMEPNSDQSPVPKEALKAYEL--V 459
G H E E G ILA + I P + +P+ L + L V
Sbjct: 488 SEFGGTVAHSLENDSENAESLGAILALQKSTIKVVISTLPATADFQLPEWLLGSDSLPIV 547
Query: 460 FDAVYTPRNTRLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRKLVLEQ 517
FD Y P +T LL +A E G VV G EM Q +GQF L+TG AP M+K+VLE
Sbjct: 548 FDVNYKPYSTALLLQATEKGCDVVRGSEMLWEQGVGQFELWTGRTAPYGVMKKVVLEN 605
>gi|168493278|ref|ZP_02717421.1| shikimate 5-dehydrogenase [Streptococcus pneumoniae CDC3059-06]
gi|418074201|ref|ZP_12711455.1| shikimate 5-dehydrogenase [Streptococcus pneumoniae GA11184]
gi|418078817|ref|ZP_12716040.1| shikimate 5-dehydrogenase [Streptococcus pneumoniae 4027-06]
gi|418080792|ref|ZP_12718004.1| shikimate 5-dehydrogenase [Streptococcus pneumoniae 6735-05]
gi|418089729|ref|ZP_12726885.1| shikimate 5-dehydrogenase [Streptococcus pneumoniae GA43265]
gi|418098704|ref|ZP_12735803.1| shikimate 5-dehydrogenase [Streptococcus pneumoniae 6901-05]
gi|418105424|ref|ZP_12742481.1| shikimate 5-dehydrogenase [Streptococcus pneumoniae GA44500]
gi|418114904|ref|ZP_12751891.1| shikimate 5-dehydrogenase [Streptococcus pneumoniae 5787-06]
gi|418117060|ref|ZP_12754030.1| shikimate 5-dehydrogenase [Streptococcus pneumoniae 6963-05]
gi|418135395|ref|ZP_12772250.1| shikimate 5-dehydrogenase [Streptococcus pneumoniae GA11426]
gi|418173718|ref|ZP_12810331.1| shikimate 5-dehydrogenase [Streptococcus pneumoniae GA41277]
gi|418216783|ref|ZP_12843506.1| shikimate 5-dehydrogenase [Streptococcus pneumoniae
Netherlands15B-37]
gi|419434453|ref|ZP_13974570.1| shikimate 5-dehydrogenase [Streptococcus pneumoniae GA40183]
gi|419440558|ref|ZP_13980606.1| shikimate 5-dehydrogenase [Streptococcus pneumoniae GA40410]
gi|419464788|ref|ZP_14004680.1| shikimate 5-dehydrogenase [Streptococcus pneumoniae GA04175]
gi|419469192|ref|ZP_14009062.1| shikimate 5-dehydrogenase [Streptococcus pneumoniae GA06083]
gi|419497749|ref|ZP_14037457.1| shikimate 5-dehydrogenase [Streptococcus pneumoniae GA47522]
gi|419534829|ref|ZP_14074330.1| shikimate 5-dehydrogenase [Streptococcus pneumoniae GA17457]
gi|421309784|ref|ZP_15760410.1| shikimate dehydrogenase [Streptococcus pneumoniae GA62681]
gi|183576529|gb|EDT97057.1| shikimate 5-dehydrogenase [Streptococcus pneumoniae CDC3059-06]
gi|353748008|gb|EHD28664.1| shikimate 5-dehydrogenase [Streptococcus pneumoniae 4027-06]
gi|353749261|gb|EHD29910.1| shikimate 5-dehydrogenase [Streptococcus pneumoniae GA11184]
gi|353753332|gb|EHD33956.1| shikimate 5-dehydrogenase [Streptococcus pneumoniae 6735-05]
gi|353761727|gb|EHD42293.1| shikimate 5-dehydrogenase [Streptococcus pneumoniae GA43265]
gi|353770064|gb|EHD50580.1| shikimate 5-dehydrogenase [Streptococcus pneumoniae 6901-05]
gi|353776360|gb|EHD56836.1| shikimate 5-dehydrogenase [Streptococcus pneumoniae GA44500]
gi|353785969|gb|EHD66385.1| shikimate 5-dehydrogenase [Streptococcus pneumoniae 5787-06]
gi|353789421|gb|EHD69816.1| shikimate 5-dehydrogenase [Streptococcus pneumoniae 6963-05]
gi|353838535|gb|EHE18613.1| shikimate 5-dehydrogenase [Streptococcus pneumoniae GA41277]
gi|353872375|gb|EHE52241.1| shikimate 5-dehydrogenase [Streptococcus pneumoniae
Netherlands15B-37]
gi|353901113|gb|EHE76659.1| shikimate 5-dehydrogenase [Streptococcus pneumoniae GA11426]
gi|379537822|gb|EHZ03004.1| shikimate 5-dehydrogenase [Streptococcus pneumoniae GA04175]
gi|379545131|gb|EHZ10272.1| shikimate 5-dehydrogenase [Streptococcus pneumoniae GA06083]
gi|379564177|gb|EHZ29174.1| shikimate 5-dehydrogenase [Streptococcus pneumoniae GA17457]
gi|379575837|gb|EHZ40767.1| shikimate 5-dehydrogenase [Streptococcus pneumoniae GA40183]
gi|379578698|gb|EHZ43607.1| shikimate 5-dehydrogenase [Streptococcus pneumoniae GA40410]
gi|379600013|gb|EHZ64795.1| shikimate 5-dehydrogenase [Streptococcus pneumoniae GA47522]
gi|395910371|gb|EJH21244.1| shikimate dehydrogenase [Streptococcus pneumoniae GA62681]
Length = 284
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 89/296 (30%), Positives = 146/296 (49%), Gaps = 33/296 (11%)
Query: 237 TKIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLVD--DVKEFFRTYSGTDFAGFSV 294
T++ +V+NP+ HS P +HN AF T NG YV ++ D+ E G ++
Sbjct: 7 TRLTAVVANPIKHSISPFIHNRAFEATATNGAYVAWEIEASDLAETVANIRRYQMFGINL 66
Query: 295 GIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALRERQG 354
+P+KE + DE+ A+ IGAVNT++ +G L+GYNTD + +
Sbjct: 67 SMPYKEQVIPYLDELSDEARLIGAVNTVVNE--NGNLIGYNTDGKGFFKCL--------- 115
Query: 355 INGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRG-ARVIIFNR--NYERAKALADAVS 411
S T I+GK L+GAGGA +++ A G +++ +F R + E+ + D +
Sbjct: 116 ----PSFT--ISGKKMTLLGAGGAAKSILAQAILDGVSQISVFVRSVSMEKTRPYLDKLQ 169
Query: 412 GEA------LHFEYLHEFFPE--KGMILANASAIGMEPNSDQSPVPKE-ALKAYELVFDA 462
+ EY+ E + +L NA+++GM+ S SPVP+ L LV D
Sbjct: 170 EQTGFKVDLCALEYVSELQARIAESDLLVNATSVGMDGQS--SPVPENIVLPETLLVADI 227
Query: 463 VYTPRNTRLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRKLVLEQF 518
+Y P T L+ A G V+G+ M + QA F+L+TG P + + + + E++
Sbjct: 228 IYQPFETPFLKWARSQGNPAVNGLGMLLYQAAEAFQLWTGKEMPTEEIWQSLTEKY 283
>gi|448561145|ref|ZP_21634497.1| shikimate 5-dehydrogenase [Haloferax prahovense DSM 18310]
gi|445721377|gb|ELZ73045.1| shikimate 5-dehydrogenase [Haloferax prahovense DSM 18310]
Length = 269
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 103/277 (37%), Positives = 138/277 (49%), Gaps = 22/277 (7%)
Query: 238 KIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPM--LVDDVKEFFRTYSGTDFAGFSVG 295
+++GLV NPVGHS P +H A+ T + YV DD+ +G +V
Sbjct: 2 QVYGLVGNPVGHSLSPPMHEAAYEETGLDARYVTFEPARDDIAAAVEGADALGVSGLNVT 61
Query: 296 IPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALRERQGI 355
IP K+ + D PLA+ IGAVNT+ K GYNTD + E R G+
Sbjct: 62 IPFKQDVLELVDP-DPLAERIGAVNTVDFGGETPK--GYNTDAAGVTRSFE-----RHGV 113
Query: 356 NGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGARVIIFNRNYERAKALADAVSG-EA 414
+AG V+VGAGGAGRA AF A V + NR E A LA+AV G
Sbjct: 114 G--------LAGNSAVVVGAGGAGRAAAFALSDADASVHVANRTAETAVELAEAVPGATG 165
Query: 415 LHFEYLHEFFPEKGMILANASAIGMEPNSDQSPVPKEALKAYELVFDAVYTPRNTRLLRE 474
+ L + +L NA+++GME + D++PVP E L V DAVYTP T+L+R+
Sbjct: 166 GGLDTLDRI--READVLVNATSVGME-SPDETPVPAEYLHGDLAVLDAVYTPLETQLIRD 222
Query: 475 AAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMR 511
AA GA + G M + Q + F +TG AP D M
Sbjct: 223 AAAAGAVTIDGAWMLLLQGVEAFERWTGRDAPVDAMN 259
>gi|406593670|ref|YP_006740849.1| shikimate 5-dehydrogenase [Chlamydia psittaci NJ1]
gi|405789542|gb|AFS28284.1| shikimate 5-dehydrogenase [Chlamydia psittaci NJ1]
Length = 477
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 106/413 (25%), Positives = 186/413 (45%), Gaps = 42/413 (10%)
Query: 94 DLDVEFVEMDYEVASDPLMSEIIYSRSNTKIIVSSYLNGGGKPTTEKLGDVIACMQATGA 153
+L E++++D + + L ++I + N KII+S + + T+E + ++ M A
Sbjct: 77 ELQPEYLDIDKDFPKEAL-AKIQKNYPNIKIILSYHSD-----TSEHIPNLCNEMLRRQA 130
Query: 154 DVMKLEIAVDSITDLAPVFEMLTHCQVPLIALAVGSRGLISQLLGPKFGGFLVYGSLGGK 213
K+ I D ++ H L +G+ G+ S++L P + Y S G
Sbjct: 131 HHYKIAITSTKSIDTLRCIQIKKHLPENTTLLCMGNAGIASRILSPLMKNAINYAS--GI 188
Query: 214 SVPGLPT-LVSLKQV--YQLEHINPDTKIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYV 270
+ P + +S++ + Y +++ +++I+GL+ NPV S + HN F + N Y+
Sbjct: 189 NAPKVAQGQLSIEDLLAYNYTNLSSESRIYGLIGNPVDRSISHLSHNKLFSELQINMSYI 248
Query: 271 PMLVD--DVKEFFRTYSGTDFAGFSVGIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPID 328
+L+ ++ EFF F G SV +P K + D + P + + NT++ R D
Sbjct: 249 KILLTPYELNEFFSLTRDLPFGGLSVTMPFKTDVLEYIDILDPSVQQCQSCNTLVFR--D 306
Query: 329 GKLVGYNTDCESAISAIEDALRERQGINGVASHTSPIAGKIFVLVGAGGAGRALAFGAKS 388
K+ GYNTD ++ L +R+ I H +VG+GG+ +A+A
Sbjct: 307 NKIAGYNTDGLGLLN-----LLKRKNILLQNKHVG--------IVGSGGSAKAIATTFAD 353
Query: 389 RGARVIIFNRNYERAKALADAVSGEALHFEYLHEFFPEKGMILANASAIGMEPNSDQSPV 448
GA++ IFNR A+ L+ G+A L E +IL P
Sbjct: 354 SGAQISIFNRTKTHAEKLSVLCHGQAFPLNALSENHNIDILILC-------------LPP 400
Query: 449 PKEALKAY-ELVFDAVYTPRNTRLLREAAEVGATVVSGVEMFIRQALGQFRLF 500
E + Y ++ D P+ + ++A E G ++ G EMF QAL QF L+
Sbjct: 401 DVEIPEIYPPVIIDINTLPKESLYTKKAKERGCQILYGYEMFAEQALLQFSLW 453
>gi|332530766|ref|ZP_08406694.1| shikimate dehydrogenase [Hylemonella gracilis ATCC 19624]
gi|332039799|gb|EGI76197.1| shikimate dehydrogenase [Hylemonella gracilis ATCC 19624]
Length = 289
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 95/281 (33%), Positives = 139/281 (49%), Gaps = 23/281 (8%)
Query: 239 IFGLVSNPVGHSKGPILHNPAFRHTRFNGIYV--PMLVDDVKEFFRTYSGTDFAGFSVGI 296
+ G++ PV HS+ P++H R G YV P+ + E R FAG ++ I
Sbjct: 7 LAGVMGWPVRHSRSPVIHGHWIREHGLKGDYVLLPVQPSHLHEALRGLQALGFAGCNLTI 66
Query: 297 PHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALRERQGIN 356
PHK A++ D V PLA IGA+NT++ + DG+L+G+NTD E + +LRE Q
Sbjct: 67 PHKVAALSMVDRVDPLAARIGAINTLVVK--DGQLLGFNTDAEGYV----QSLREAQ--P 118
Query: 357 GVASHTSPIAGKIFVLVGAGGAGRA-LAFGAKSRGARVIIFNRNYERAKALADAVSGEAL 415
G + T P AG + VL GAGGA RA LA + + I NR+ ++A+ALA
Sbjct: 119 GWRADTGPHAGPVAVL-GAGGAARAVLAVLGEQGAPEIRICNRSLDKAQALAAEFGAHYR 177
Query: 416 HFEYLHEFFPEKGMI------LANASAIGMEPNSDQSPVPKEALKAYELVFDAVYTPRNT 469
+L + ++ L N +++GM D + +AL LV D +YTP T
Sbjct: 178 GTRWLALPWDQRDAALEGCSQLVNTTSLGMT-GQDALTLRLDALPRTALVCDVIYTPLET 236
Query: 470 RLLREAAEVGA---TVVSGVEMFIRQALGQFRLFTGGLAPE 507
LL A V+G+ M + QA F+ + G L PE
Sbjct: 237 PLLAAARTRPGGQHVTVNGLGMLLYQARAAFQHWFGVL-PE 276
>gi|138896097|ref|YP_001126550.1| shikimate 5-dehydrogenase [Geobacillus thermodenitrificans NG80-2]
gi|134267610|gb|ABO67805.1| Shikimate 5-dehydrogenase [Geobacillus thermodenitrificans NG80-2]
Length = 276
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 96/292 (32%), Positives = 143/292 (48%), Gaps = 31/292 (10%)
Query: 238 KIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLVD--DVKEFFRTYSGTDFAGFSVG 295
++GL+ PV HS P++HN AF + + Y V+ V E AG +V
Sbjct: 3 NVYGLLGFPVEHSLSPLMHNDAFAYFGISARYHLFSVNPEQVGEAIAGVRALGIAGVNVT 62
Query: 296 IPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALRERQGI 355
IPHK + DEV A+ IGAVNTI+ G+L+GYNTD + A+E+ +
Sbjct: 63 IPHKMAVIPFLDEVDEHARRIGAVNTIVND--SGRLIGYNTDGPGYVKALEEEM------ 114
Query: 356 NGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGA-RVIIFNRNYERAKALADAVSGEA 414
+ GK +L+GAGG R + F S A R+ I NR E+A L GE
Sbjct: 115 ------DIHLDGKRILLIGAGGGARGIYFSLLSTAAERIDIANRTAEKAARLI----GEG 164
Query: 415 LHFEYLHEFFP----EKGM----ILANASAIGMEPNSDQSPVPKEALKAYELVFDAVYTP 466
E FFP E+ + I+ N +++GM P+ D+ P+ + ++ +V D +Y P
Sbjct: 165 --DERRSTFFPLAEAERRLAEYDIIINTTSVGMHPHVDEQPLSLQQMRPGTVVSDIIYNP 222
Query: 467 RNTRLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRKLVLEQF 518
T+ L+EA GA V +GV M + Q F +TG + M++LV+ Q
Sbjct: 223 LETKWLKEAKARGARVQNGVGMLVYQGALAFEKWTGQWPDVNRMKQLVINQL 274
>gi|444381943|ref|ZP_21180148.1| shikimate dehydrogenase [Streptococcus pneumoniae PCS8106]
gi|444384611|ref|ZP_21182705.1| shikimate dehydrogenase [Streptococcus pneumoniae PCS8203]
gi|444252371|gb|ELU58835.1| shikimate dehydrogenase [Streptococcus pneumoniae PCS8203]
gi|444253542|gb|ELU59997.1| shikimate dehydrogenase [Streptococcus pneumoniae PCS8106]
Length = 284
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 90/296 (30%), Positives = 146/296 (49%), Gaps = 33/296 (11%)
Query: 237 TKIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLVD--DVKEFFRTYSGTDFAGFSV 294
T++ +V+NP+ HS P +HN AF T NG YV V+ D+ E G ++
Sbjct: 7 TRLAAVVANPIKHSISPFIHNRAFEATATNGAYVAWEVEASDLVETVANIRRYQMFGINL 66
Query: 295 GIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALRERQG 354
+P+KE + DE+ A+ IGAVNT++ +G L+GYNTD + +
Sbjct: 67 SMPYKEQVIPYLDELSDEARLIGAVNTVVNE--NGNLIGYNTDGKGFFKCL--------- 115
Query: 355 INGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRG-ARVIIFNR--NYERAKALADAVS 411
S T I+GK L+GAGGA +++ A G +++ +F R + E+ + D +
Sbjct: 116 ----PSFT--ISGKKMTLLGAGGAAKSILAQAILDGVSQISVFVRSVSMEKTRPYLDKLQ 169
Query: 412 GEA------LHFEYLHEFFPE--KGMILANASAIGMEPNSDQSPVPKE-ALKAYELVFDA 462
+ EY+ E + +L NA+++GM+ S SPVP+ L LV D
Sbjct: 170 EQTGFKVDLCALEYVSELQARIAESDLLVNATSVGMDGQS--SPVPENIVLPETLLVADI 227
Query: 463 VYTPRNTRLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRKLVLEQF 518
+Y P T L+ A G V+G+ M + QA F+L+TG P + + + + E++
Sbjct: 228 IYQPFETPFLKWARSQGNPAVNGLGMLLYQAAEAFQLWTGKKMPTEEIWQSLTEKY 283
>gi|210620638|ref|ZP_03292162.1| hypothetical protein CLOHIR_00105 [Clostridium hiranonis DSM 13275]
gi|210155247|gb|EEA86253.1| hypothetical protein CLOHIR_00105 [Clostridium hiranonis DSM 13275]
Length = 291
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 86/297 (28%), Positives = 142/297 (47%), Gaps = 30/297 (10%)
Query: 231 EHINPDTKIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLVDD--VKEFFRTYSGTD 288
E I T++ GL++ P+ HS P + N AF + Y+ VD+ +++
Sbjct: 3 ERITGYTELIGLMAYPIRHSSSPAMQNEAFAKLGLDYAYLAFEVDNDTLEDAITGLRALK 62
Query: 289 FAGFSVGIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDA 348
G +V +P+K DE+ P A+ GAVNTI+ +GKL G+ TD + +++D
Sbjct: 63 MRGSNVSMPNKTVVHKYLDELSPAAEMCGAVNTIVND--NGKLTGHITDGIGYMQSLKD- 119
Query: 349 LRERQGINGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRG-ARVIIFNRN---YERAK 404
+ + GK +VGAGGA A+ A G A + IFNR + A+
Sbjct: 120 ------------NDIDVIGKKMTIVGAGGAATAIEIQAALDGVAEISIFNRKDEFWSNAE 167
Query: 405 ALADAVSGEALHFEYLHEFFP--------EKGMILANASAIGMEPNSDQSPVPKEALKAY 456
+ ++ + L++ E + ANA+ +GM+P Q+ +P ++
Sbjct: 168 KTVEKINTKTNCKATLYDLADLDKLKEEIEDSYLFANATGMGMKPLEGQTYIPDKSFFRK 227
Query: 457 EL-VFDAVYTPRNTRLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRK 512
+L V D VY PR T +LR A EVG ++G+ M + Q F L+TG P ++M++
Sbjct: 228 DLIVTDVVYFPRETEMLRMAKEVGCKTMNGLGMMLFQGSAAFELWTGQPMPIEYMKE 284
>gi|118475038|ref|YP_892296.1| shikimate 5-dehydrogenase [Campylobacter fetus subsp. fetus 82-40]
gi|424820946|ref|ZP_18245984.1| shikimate 5-dehydrogenase [Campylobacter fetus subsp. venerealis
NCTC 10354]
gi|118414264|gb|ABK82684.1| shikimate 5-dehydrogenase [Campylobacter fetus subsp. fetus 82-40]
gi|342327725|gb|EGU24209.1| shikimate 5-dehydrogenase [Campylobacter fetus subsp. venerealis
NCTC 10354]
Length = 261
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 81/268 (30%), Positives = 129/268 (48%), Gaps = 33/268 (12%)
Query: 238 KIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLVDDVKEFFRTYSGTDFAGFSVGIP 297
K F + NP+ HS P LHN A + G Y + ++D E T++ + +G +V +P
Sbjct: 2 KYFAVFGNPINHSISPRLHNLALQGYGLAGFYGRVHLEDGLELINTFNKLELSGANVTVP 61
Query: 298 HKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALRERQGING 357
KE + CDE+ AKSIG++NT+++R +GK+ GYNTD + AI E + I
Sbjct: 62 FKEIVLNQCDEIDETAKSIGSLNTLVKR--NGKIFGYNTDAPGFMLAIS----EFKDIES 115
Query: 358 VASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGARVIIFNRNYERAKALADAVSGEALHF 417
+++GAGG RA+ + + G V I NR+ RA++ D
Sbjct: 116 A------------LILGAGGTARAICYILQKNGIDVEILNRSSSRAQSFKDCSF------ 157
Query: 418 EYLHEFFPEKGMIL-ANASAIGMEPNSDQSP----VPKEALKAYELVFDAVYTPRNTRLL 472
+ H+ + KG L N ++ G+ D P + K+ L + + FD +Y +NT L
Sbjct: 158 -FTHQDYKPKGYTLVVNTTSAGLA--DDHLPANRDILKQVLDSSKFAFDVIYN-KNTPFL 213
Query: 473 REAAEVGATVVSGVEMFIRQALGQFRLF 500
A T G +M + QA+ F +F
Sbjct: 214 NLAKSCSLTCKDGKDMLLFQAILSFNIF 241
>gi|405118432|gb|AFR93206.1| arom polypeptide [Cryptococcus neoformans var. grubii H99]
Length = 1611
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 156/529 (29%), Positives = 227/529 (42%), Gaps = 71/529 (13%)
Query: 32 VEGADLVELCIDSMEFSH----------ISEVDKLIQH----PTLPAIVSYRLKSS--RK 75
EGAD VE ID + + IS V K + TLP + S R K
Sbjct: 1110 TEGADAVEFRIDLLNTTGHAPTSPASPPISFVAKQLASLRLATTLPIVFSVRSKDQGGMV 1169
Query: 76 SSDEACKNTCLQVLRRALDLDVEFVEMDYEVASDPLMSEIIYSRSNTKIIVSSYLNGGGK 135
SD A L +R L E+V+++ + L+ I+ + T II S + G
Sbjct: 1170 PSDNAEAYGAL--VRLGLRCACEYVDLEV-CWPEQLLDSIVQLKRETHIIASWHDWTGDM 1226
Query: 136 PT-----------TEKLGDV--IACMQATGADVMKLEIAVDSITDLAPVFEMLTHCQV-P 181
EK GDV I +G D KL I V E+ +H P
Sbjct: 1227 AWDGEEMKAKHVLCEKYGDVAKIVGTAKSGLDNAKLAIFVG---------EVQSHPGAKP 1277
Query: 182 LIALAVGSRGLISQLLGPKFGGFLVYGSLGGKSVPGLPTLVSLKQVYQLEHINPDTKIFG 241
L+A+ +G+ G +S++L P + + +L ++ PG T + Q L P K F
Sbjct: 1278 LLAINMGAAGQLSRVLNPILTP-VTHDALPSRAAPGQLTAREILQARALTGSLPAKK-FV 1335
Query: 242 LVSNPVGHSKGPILHNPAFRHTRF---NGIYVPMLVDD-VKEFFRTYSGTDFAGFSVGIP 297
L +P+ HS P+LHN F G++ VD V E R+ +F G SV IP
Sbjct: 1336 LFGSPIAHSVSPLLHNTGFATLGLPHNYGLHESEKVDQGVLEMIRS---PEFGGASVTIP 1392
Query: 298 HKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALRERQGING 357
K + D V AK IGAVNT+I P GKL G NTD ++ A L +
Sbjct: 1393 LKLDIIPHLDSVSEDAKIIGAVNTVI--PRGGKLYGENTDWQAIRQAAAQNLD-----DD 1445
Query: 358 VASHTSPIAGKIFVLVGAGGAGRALAFGA-KSRGARVIIFNRNYERAKALADAVSGEALH 416
V S S A +++GAGG RA + K R + +FNR E A A A E+ +
Sbjct: 1446 VLSDGSSTA----LVIGAGGTCRAAIYAMHKLRFKTIYLFNRTPENA-AKVKASFPESYN 1500
Query: 417 FEYLHEF--FPEKGMILAN---ASAIGMEPNSDQSPVPKEAL-KAYELVFDAVYTPRNTR 470
+ PE +++ + +++ ++ S +P E + + D Y P T
Sbjct: 1501 IAIVTSLSSLPEAPVVVVSTVPGNSLTLDTFSQGIYLPSEVFSRPKGVAIDLAYKPHMTA 1560
Query: 471 LLREAAEV-GATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRKLVLEQF 518
LL+ A + G + GVE+ Q QF +TG APE MRK VL+++
Sbjct: 1561 LLQAAEKKEGWKALPGVEILCLQGFKQFEEWTGKRAPEKKMRKAVLDKY 1609
>gi|420366577|ref|ZP_14867414.1| shikimate / quinate 5-dehydrogenase family protein [Shigella
flexneri 1235-66]
gi|391324093|gb|EIQ80704.1| shikimate / quinate 5-dehydrogenase family protein [Shigella
flexneri 1235-66]
Length = 288
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 92/293 (31%), Positives = 142/293 (48%), Gaps = 32/293 (10%)
Query: 238 KIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLVDDVKEFFRTYSGTD---FAGFSV 294
++ GL++ P+ HS P + N A Y+ VD+ F +G G V
Sbjct: 8 ELIGLMAYPIRHSLSPEMQNKALEKAGLPFTYMAFEVDN-STFANAIAGLKALKMRGTGV 66
Query: 295 GIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALRERQG 354
+P+K+ A DE+ P AK +GA+NTI+ DG L GYNTD I AI+++ G
Sbjct: 67 SMPNKQLACEYVDELTPAAKLVGAINTIVND--DGYLRGYNTDGTGHIRAIKES-----G 119
Query: 355 INGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGARVI-IFNRN---YERAKALADAV 410
+ I GK VL+GAGGA A+ A G + I IFNR + +A+A A V
Sbjct: 120 FD--------IKGKTMVLLGAGGASTAIGAQAAIEGIKEIKIFNRKDEFFAKAQAFAKRV 171
Query: 411 SGEALHFEYLHEFFPEKGM--------ILANASAIGMEPNSDQSPVPKEALKAYEL-VFD 461
+ + + + IL N + +GM+P ++S V +L EL V +
Sbjct: 172 NENTDCVVTVIDLADRQAFAEALASADILTNGTKVGMKPLDNESIVTDVSLLRPELLVTE 231
Query: 462 AVYTPRNTRLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRKLV 514
VY P TRLL++A G + G M + Q QF+L+TG P +++++++
Sbjct: 232 CVYNPHMTRLLQQAQHAGCKTIDGYGMLLWQGAEQFKLWTGKDFPLEYVKQVM 284
>gi|422303712|ref|ZP_16391063.1| Shikimate dehydrogenase [Microcystis aeruginosa PCC 9806]
gi|389791318|emb|CCI12894.1| Shikimate dehydrogenase [Microcystis aeruginosa PCC 9806]
Length = 286
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 81/298 (27%), Positives = 145/298 (48%), Gaps = 27/298 (9%)
Query: 233 INPDTKIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLV--DDVKEFFRTYSGTDFA 290
IN TK+ G++ +P+GH+ P +HN A N +Y+P+ + ++ + D
Sbjct: 4 INGKTKLLGVIGDPIGHTLSPPMHNAAIDALGLNYVYLPLPIAPKNLATAIAGLAAIDLQ 63
Query: 291 GFSVGIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALR 350
GFSV IPHK + ++ A+ +GAVNT+ R + G NTD + ++ ++ +
Sbjct: 64 GFSVTIPHKLAIIPLLSQITEKARLVGAVNTVWRTETGWQ--GTNTDVDGFLAPLKSLDK 121
Query: 351 ERQGINGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRG-ARVIIFNRNYERAKALADA 409
+ +N PI ++G GGA RA+ G ++ + RN ++ ++
Sbjct: 122 DWSRVN-------PI------ILGNGGAARAVVVACAQLGCGKIHVVGRNQKKLDPFKES 168
Query: 410 VSGEALH-FEYLHEFFPEKGMI-----LANASAIGMEPNSDQSPVPKEALKAYE---LVF 460
+ +L+ +H + +G++ L N++ IGM P +QSPV E L + +
Sbjct: 169 WANTSLYDLLEVHSWDELEGLLSTTELLINSTPIGMSPQGEQSPVELELLDLLPPSAIAY 228
Query: 461 DAVYTPRNTRLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRKLVLEQF 518
D +Y PR T+ L+ A G ++ G+EM + Q ++ G P MR+ +L+QF
Sbjct: 229 DLIYNPRPTKFLQLARTRGIRIIDGLEMLVNQGAIALEIWLGQPVPVSVMREALLKQF 286
>gi|374629242|ref|ZP_09701627.1| shikimate kinase [Methanoplanus limicola DSM 2279]
gi|373907355|gb|EHQ35459.1| shikimate kinase [Methanoplanus limicola DSM 2279]
Length = 467
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 96/283 (33%), Positives = 141/283 (49%), Gaps = 18/283 (6%)
Query: 236 DTKIFGLVS---NPVGHSKGPILHNPAFRHTRFNGIYVPMLVDDVKEFFRTYSGTDFAGF 292
+ K F L + NP HSK P ++ F + +G Y M D E RT + G
Sbjct: 200 ERKAFNLCAISGNPCMHSKSPAIYRKIFENYGISGFYTYMEAADFGEIIRTAEISGMRGL 259
Query: 293 SVGIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALRER 352
S+ IP KE AV E+ P A +IGAVNT + G+ G+NTD ++ + +
Sbjct: 260 SITIPFKEDAVDFMSEISPDAAAIGAVNTAVN--FCGRFYGFNTDWIGIAEPLKSSFK-- 315
Query: 353 QGINGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGARVIIFNRNYERAKALADAVSG 412
+ I GK V+VGAGGA RA + G V + NRN ++A LA++
Sbjct: 316 -------NAGESIKGKSAVVVGAGGAARAAVYALIVLGFDVTVLNRNEKKAAELAESFEC 368
Query: 413 EALHFEYLHEFFPEKGMILANASAIGMEPNSDQSPVPKEALKAYELVFDAVYTPRNTRLL 472
+ +H + ++ NA+ +GM S S VP+ L+ VFD VYTP +T+LL
Sbjct: 369 RSGGLNEIHSCVFD---VIINATPVGMN-RSGGSVVPESVLREGMRVFDLVYTPADTKLL 424
Query: 473 REAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRKLVL 515
+ A + G +SG EMF+ QA+ QF L G E+F+R+ +L
Sbjct: 425 KMAEKKGCIPISGTEMFVHQAVEQFFLMFGFRPEEEFIREAML 467
>gi|399575398|ref|ZP_10769156.1| shikimate 5-dehydrogenase [Halogranum salarium B-1]
gi|399239666|gb|EJN60592.1| shikimate 5-dehydrogenase [Halogranum salarium B-1]
Length = 285
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 108/285 (37%), Positives = 141/285 (49%), Gaps = 28/285 (9%)
Query: 238 KIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLVD--DVKEFFRTYSGTDFAGFSVG 295
++FGLV NPVGHS P +H A+ + YV D + + R G +V
Sbjct: 11 QVFGLVGNPVGHSLSPPMHEVAYEALGMDARYVTFEPDPDSLADAVRGADALGITGLNVT 70
Query: 296 IPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKL-VGYNTDCESAISAIEDALRERQG 354
IP K+ + D PLA IGAVNT+ DG + GYNTD A A+E
Sbjct: 71 IPFKQEMLELVDP-DPLAARIGAVNTVDFSS-DGDVPTGYNTDAGGARRALE-------- 120
Query: 355 INGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGARVIIFNRNYERAKALADAVS--- 411
H + G V+VGAGGAGRA+AF GA V I NR A LA+AV+
Sbjct: 121 -----RHDVTLDGAAAVVVGAGGAGRAVAFALADAGATVHIANRTEATATELANAVAETE 175
Query: 412 ---GEALHFEYLHEFFPE--KGMILANASAIGMEPNSDQSPVPKEALKAYELVFDAVYTP 466
+A+ L P +L NA+++GME SD++P+P E L A V DAVY+P
Sbjct: 176 SVANDAVTAGGLDSLAPTVPDADVLVNATSVGME--SDETPIPAELLHANLAVMDAVYSP 233
Query: 467 RNTRLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMR 511
TRLLR+A + GAT V G M + Q + F +TG P D M
Sbjct: 234 LETRLLRDATQAGATTVDGAWMLLYQGVEAFDHWTGRDPPVDKMN 278
>gi|149011611|ref|ZP_01832807.1| shikimate 5-dehydrogenase [Streptococcus pneumoniae SP19-BS75]
gi|182684336|ref|YP_001836083.1| shikimate 5-dehydrogenase [Streptococcus pneumoniae CGSP14]
gi|303254532|ref|ZP_07340636.1| shikimate 5-dehydrogenase [Streptococcus pneumoniae BS455]
gi|303258971|ref|ZP_07344950.1| shikimate/quinate 5-dehydrogenase [Streptococcus pneumoniae
SP-BS293]
gi|303261655|ref|ZP_07347602.1| shikimate/quinate 5-dehydrogenase [Streptococcus pneumoniae
SP14-BS292]
gi|303264324|ref|ZP_07350244.1| shikimate/quinate 5-dehydrogenase [Streptococcus pneumoniae BS397]
gi|303265877|ref|ZP_07351774.1| shikimate/quinate 5-dehydrogenase [Streptococcus pneumoniae BS457]
gi|303268210|ref|ZP_07354009.1| shikimate/quinate 5-dehydrogenase [Streptococcus pneumoniae BS458]
gi|387759530|ref|YP_006066508.1| shikimate 5-dehydrogenase [Streptococcus pneumoniae INV200]
gi|418087062|ref|ZP_12724232.1| shikimate 5-dehydrogenase [Streptococcus pneumoniae GA47033]
gi|418139700|ref|ZP_12776526.1| shikimate 5-dehydrogenase [Streptococcus pneumoniae GA13338]
gi|418180730|ref|ZP_12817300.1| shikimate 5-dehydrogenase [Streptococcus pneumoniae GA41688]
gi|419455743|ref|ZP_13995701.1| shikimate 5-dehydrogenase [Streptococcus pneumoniae EU-NP04]
gi|419514897|ref|ZP_14054522.1| shikimate 5-dehydrogenase [Streptococcus pneumoniae England14-9]
gi|421206822|ref|ZP_15663876.1| shikimate 5-dehydrogenase [Streptococcus pneumoniae 2090008]
gi|421229997|ref|ZP_15686664.1| shikimate 5-dehydrogenase [Streptococcus pneumoniae 2061376]
gi|421285238|ref|ZP_15736015.1| shikimate dehydrogenase 15 [Streptococcus pneumoniae GA60190]
gi|421292268|ref|ZP_15743003.1| shikimate dehydrogenase 15 [Streptococcus pneumoniae GA56348]
gi|421296213|ref|ZP_15746924.1| shikimate dehydrogenase 15 [Streptococcus pneumoniae GA58581]
gi|421312200|ref|ZP_15762803.1| shikimate dehydrogenase 15 [Streptococcus pneumoniae GA58981]
gi|238691168|sp|B2IQJ4.1|AROE_STRPS RecName: Full=Shikimate dehydrogenase
gi|73915778|gb|AAZ92757.1| shikimate 5-dehydrogenase [Streptococcus pneumoniae]
gi|73915780|gb|AAZ92758.1| shikimate 5-dehydrogenase [Streptococcus pneumoniae]
gi|73915788|gb|AAZ92762.1| shikimate 5-dehydrogenase [Streptococcus pneumoniae]
gi|73915852|gb|AAZ92794.1| shikimate 5-dehydrogenase [Streptococcus pneumoniae]
gi|73915856|gb|AAZ92796.1| shikimate 5-dehydrogenase [Streptococcus pneumoniae]
gi|147764042|gb|EDK70974.1| shikimate 5-dehydrogenase [Streptococcus pneumoniae SP19-BS75]
gi|182629670|gb|ACB90618.1| shikimate/quinate 5-dehydrogenase [Streptococcus pneumoniae CGSP14]
gi|301802119|emb|CBW34855.1| shikimate 5-dehydrogenase [Streptococcus pneumoniae INV200]
gi|302598500|gb|EFL65542.1| shikimate 5-dehydrogenase [Streptococcus pneumoniae BS455]
gi|302637235|gb|EFL67723.1| shikimate/quinate 5-dehydrogenase [Streptococcus pneumoniae
SP14-BS292]
gi|302639914|gb|EFL70370.1| shikimate/quinate 5-dehydrogenase [Streptococcus pneumoniae
SP-BS293]
gi|302642289|gb|EFL72637.1| shikimate/quinate 5-dehydrogenase [Streptococcus pneumoniae BS458]
gi|302644612|gb|EFL74862.1| shikimate/quinate 5-dehydrogenase [Streptococcus pneumoniae BS457]
gi|302646136|gb|EFL76363.1| shikimate/quinate 5-dehydrogenase [Streptococcus pneumoniae BS397]
gi|353759323|gb|EHD39909.1| shikimate 5-dehydrogenase [Streptococcus pneumoniae GA47033]
gi|353845432|gb|EHE25474.1| shikimate 5-dehydrogenase [Streptococcus pneumoniae GA41688]
gi|353905173|gb|EHE80612.1| shikimate 5-dehydrogenase [Streptococcus pneumoniae GA13338]
gi|379628877|gb|EHZ93479.1| shikimate 5-dehydrogenase [Streptococcus pneumoniae EU-NP04]
gi|379635446|gb|EIA00005.1| shikimate 5-dehydrogenase [Streptococcus pneumoniae England14-9]
gi|395575097|gb|EJG35668.1| shikimate 5-dehydrogenase [Streptococcus pneumoniae 2090008]
gi|395594529|gb|EJG54765.1| shikimate 5-dehydrogenase [Streptococcus pneumoniae 2061376]
gi|395887217|gb|EJG98232.1| shikimate dehydrogenase 15 [Streptococcus pneumoniae GA60190]
gi|395892396|gb|EJH03387.1| shikimate dehydrogenase 15 [Streptococcus pneumoniae GA56348]
gi|395896086|gb|EJH07054.1| shikimate dehydrogenase 15 [Streptococcus pneumoniae GA58581]
gi|395910629|gb|EJH21501.1| shikimate dehydrogenase 15 [Streptococcus pneumoniae GA58981]
Length = 284
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 89/296 (30%), Positives = 146/296 (49%), Gaps = 33/296 (11%)
Query: 237 TKIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLVD--DVKEFFRTYSGTDFAGFSV 294
T++ +V+NP+ HS P +HN AF T NG YV ++ D+ E G ++
Sbjct: 7 TRLAAVVANPIKHSISPFIHNRAFEATATNGAYVAWEIEASDLAETVANIRRYQMFGINL 66
Query: 295 GIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALRERQG 354
+P+KE + DE+ A+ IGAVNT++ +G L+GYNTD + +
Sbjct: 67 SMPYKEQVIPYLDELSDEARLIGAVNTVVNE--NGNLIGYNTDGKGFFKCL--------- 115
Query: 355 INGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRG-ARVIIFNR--NYERAKALADAVS 411
S T I+GK L+GAGGA +++ A G +++ +F R + E+ + D +
Sbjct: 116 ----PSFT--ISGKKMTLLGAGGAAKSILAQAILDGVSQISVFVRSVSMEKTRPYLDKLQ 169
Query: 412 GEA------LHFEYLHEFFPE--KGMILANASAIGMEPNSDQSPVPKE-ALKAYELVFDA 462
+ EY+ E + +L NA+++GM+ S SPVP+ L LV D
Sbjct: 170 EQTGFKVDLCALEYVSELQARIAESDLLVNATSVGMDGQS--SPVPENIVLPETLLVADI 227
Query: 463 VYTPRNTRLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRKLVLEQF 518
+Y P T L+ A G V+G+ M + QA F+L+TG P + + + + E++
Sbjct: 228 IYQPFETPFLKWARSQGNPAVNGLGMLLYQAAEAFQLWTGKEMPTEEIWQSLTEKY 283
>gi|417912227|ref|ZP_12555922.1| shikimate dehydrogenase [Staphylococcus epidermidis VCU105]
gi|418621436|ref|ZP_13184212.1| shikimate dehydrogenase [Staphylococcus epidermidis VCU123]
gi|420187201|ref|ZP_14693222.1| shikimate dehydrogenase [Staphylococcus epidermidis NIHLM039]
gi|341651238|gb|EGS75043.1| shikimate dehydrogenase [Staphylococcus epidermidis VCU105]
gi|374829380|gb|EHR93184.1| shikimate dehydrogenase [Staphylococcus epidermidis VCU123]
gi|394256180|gb|EJE01113.1| shikimate dehydrogenase [Staphylococcus epidermidis NIHLM039]
Length = 269
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 79/283 (27%), Positives = 140/283 (49%), Gaps = 24/283 (8%)
Query: 240 FGLVSNPVGHSKGPILHNPAFRHTRFNGIY--VPMLVDDVKEFFRTYSGTDFAGFSVGIP 297
F ++ NP+ HS P++H+ F+ Y + + V+ ++ + S GF+V IP
Sbjct: 3 FAVIGNPISHSLSPLMHHANFQSLNLENTYEAINVPVNQFQDIKKIISEKSIDGFNVTIP 62
Query: 298 HKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALRERQGING 357
HKE + D+++ AKS+GAVNT++ + DGK +GYNTD +NG
Sbjct: 63 HKERIIPYLDDINEQAKSVGAVNTVLVK--DGKWIGYNTDGIGY-------------VNG 107
Query: 358 VASHTSPIAGKIFVLVGAGGAGRALAFG-AKSRGARVIIFNRNYERAKALADAVSGEALH 416
+ I +++GAGGA + +A K + + NR R +++ ++
Sbjct: 108 LKQIYEGIEDAYILILGAGGASKGIANELYKIVRPTLTVANRTMSRFNNW--SLNNNKIN 165
Query: 417 FEYLHEFFPEKGMILANASAIGMEPNSDQSPVPKEALKAYELVFDAVYTPRNTRLLREAA 476
+ E +I+ N + GM N+D S + L ++ LV D VY P T +L EA
Sbjct: 166 LSHAESHLDEFDIII-NTTPAGMNGNTD-SVISLNRLASHTLVSDIVYNPYKTPILIEAE 223
Query: 477 EVGATVVSGVEMFIRQALGQFRLFTGGLAPE-DFMRKLVLEQF 518
+ G + +G++MF+ Q F+++T L P+ M+ +V+++
Sbjct: 224 QRGNPIYNGLDMFVHQGAESFKIWT-NLEPDIKAMKNIVIQKL 265
>gi|336271875|ref|XP_003350695.1| hypothetical protein SMAC_02366 [Sordaria macrospora k-hell]
gi|327507672|sp|D1ZA70.1|ARO1_SORMK RecName: Full=Pentafunctional AROM polypeptide; Includes: RecName:
Full=3-dehydroquinate synthase; Short=DHQS; Includes:
RecName: Full=3-phosphoshikimate
1-carboxyvinyltransferase; AltName:
Full=5-enolpyruvylshikimate-3-phosphate synthase;
Short=EPSP synthase; Short=EPSPS; Includes: RecName:
Full=Shikimate kinase; Short=SK; Includes: RecName:
Full=3-dehydroquinate dehydratase;
Short=3-dehydroquinase; Includes: RecName: Full=Shikimate
dehydrogenase
gi|380094857|emb|CCC07359.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 1563
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 149/518 (28%), Positives = 226/518 (43%), Gaps = 84/518 (16%)
Query: 32 VEGADLVELCIDSMEFSHISEVDK----LIQHPTLPAIVSYRLKSSRKSSDEACKNTCLQ 87
V G+D VEL +D +E V K L +P + + R S + L+
Sbjct: 1068 VVGSDAVELRVDLLEDYDPEFVAKQVALLRSAARIPIVYTVRTVSQGGKFPDDDYALALK 1127
Query: 88 VLRRALDLDVEFVEMDYEVASDPLMSEIIYSRSNTKIIVS--------SYLNGGGKPTTE 139
+ R L VE+++++ + D ++ + + T II S S+ NGG
Sbjct: 1128 LYRTGLQAGVEYLDLEMTM-PDEVIEAVTNEKGYTHIIASHHDPKATLSWKNGGWIQYYN 1186
Query: 140 KLGDVIACMQATGADVMKLEIAVDSITD---LAPVFEMLTHCQ-VPLIALAVGSRGLISQ 195
K +Q DV+KL ++D LA L P I L +G+ G +S+
Sbjct: 1187 K------ALQH--GDVVKLVGVARELSDNFALARFKASLAAAHDKPFIGLNMGTAGKLSR 1238
Query: 196 LLGPKFGGFLV---YGSLGGKSVPGLPTLVSLKQVYQL-EHINPDTKIFGLVSNPVGHSK 251
+L GFL + +L K+ PG + ++Q L + P + F L P+ S+
Sbjct: 1239 VLN----GFLTPVSHPALPSKAAPGQLSAAEIRQALALIGELEP--RSFYLFGKPISASR 1292
Query: 252 GPILHNPAFRHTRFNGIYVPMLVD---DVKEFFRTYSGTDFAGFSVGIPHKEPAVACCDE 308
P LHN FR Y D DVKE R TDF G SV IP K + DE
Sbjct: 1293 SPALHNALFRDNGLPHQYSLFETDNAADVKELIR---ATDFGGASVTIPLKLDIMPLLDE 1349
Query: 309 VHPLAKSIGAVNTIIRRPIDG----KLVGYNTDCESAISAIEDALRERQGINGVASHTSP 364
V AK IGAVNTII P+ L G NTD + A+ +A G+ V S SP
Sbjct: 1350 VSDAAKVIGAVNTII--PVGSGDKVTLRGDNTDWMGMVYALRNA-----GVVKV-SKESP 1401
Query: 365 IAGKIFVLVGAGGAGRALAFGAKSRG-ARVIIFNRNYERAKALADAVSGEALHFEYLHEF 423
AG ++VG+GG RA + G A + + RN +R KALA++ + ++
Sbjct: 1402 AAG---MVVGSGGTTRAAVYALHDLGFAPIYVVARNADRIKALAESFPAD---YDIRSLS 1455
Query: 424 FPEKGMILANASAIGMEPNSDQSPVP---------KEALKA----------YELVFDAVY 464
PE+ + A ++A +P+ S +P +E L A ++ + Y
Sbjct: 1456 TPEE--VAAESTA---QPSVVISTIPADKPIEQSMREVLVASLRHPSVTNGKHVLLEMAY 1510
Query: 465 TPRNTRLLREAAEVGATVVSGVEMFIRQALGQFRLFTG 502
TPR+T L++ A + + G+E+ Q QF+L+TG
Sbjct: 1511 TPRHTPLMQLAEDAHWQTIPGLEVLAAQGWYQFQLWTG 1548
>gi|333910252|ref|YP_004483985.1| shikimate dehydrogenase [Methanotorris igneus Kol 5]
gi|333750841|gb|AEF95920.1| Shikimate dehydrogenase [Methanotorris igneus Kol 5]
Length = 283
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 101/297 (34%), Positives = 150/297 (50%), Gaps = 29/297 (9%)
Query: 233 INPDTKIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVP--MLVDDVKEFFRTYSGTDFA 290
IN TK+ GL+ +PV HS PI+HN AFR N +Y+ +L +++K
Sbjct: 2 INAKTKLIGLLGHPVEHSFSPIMHNAAFRDKNLNYVYLAFDVLPENLKYVIDGAKAMGIV 61
Query: 291 GFSVGIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALR 350
GF+V IPHK + DE+ AK IGAVNTI + + K VGYNTD A A+E+ +
Sbjct: 62 GFNVTIPHKIEIMKYLDEIDENAKLIGAVNTI--KIENNKAVGYNTDGLGARMALEEEIG 119
Query: 351 ERQGINGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGARVIIFNRNYERAKALADAV 410
++ + K ++ GAGGA RA+AF ++ +II NR E+AK LA+ +
Sbjct: 120 KK------------VENKNIIIYGAGGAARAVAFEL-AKNNNIIIANRTVEKAKNLAEEI 166
Query: 411 SGEALHFEYLHEFFPEKGM--------ILANASAIGMEPNSDQSPVPK-EALKAYELVFD 461
+ E E G+ I+ NA+ IGM PN D P+ K E + +V D
Sbjct: 167 REKLNKTE---EEVKYSGLDANLDGIDIIINATPIGMYPNVDVKPIVKAEQMHKDMVVMD 223
Query: 462 AVYTPRNTRLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRKLVLEQF 518
+Y P T LL+EA + GA ++G+ M I Q F ++T + M+ ++
Sbjct: 224 LIYNPLETVLLKEAKKAGAKAINGLGMLIYQGAIAFEIWTNEKPNIEVMKNAIINHL 280
>gi|293400587|ref|ZP_06644732.1| shikimate dehydrogenase [Erysipelotrichaceae bacterium 5_2_54FAA]
gi|291305613|gb|EFE46857.1| shikimate dehydrogenase [Erysipelotrichaceae bacterium 5_2_54FAA]
Length = 290
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 87/309 (28%), Positives = 143/309 (46%), Gaps = 42/309 (13%)
Query: 231 EHINPDTKIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLV--DDVKEFFRTYSGTD 288
E I T++ GL++ P+ HSK P +HN AF + Y+ V + +++ + +
Sbjct: 3 ERITGHTELIGLIATPIRHSKSPTMHNEAFAKLGLDYAYLAFEVGNEQLEDAVKGFKALS 62
Query: 289 FAGFSVGIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDA 348
G++V +P+K D + P A+ GAVNT++ G L G+ TD + A++D
Sbjct: 63 VRGWNVSMPNKTVIGKYLDHLSPAAELCGAVNTVVND--HGVLTGHITDGIGYMRALKD- 119
Query: 349 LRERQGINGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGARVI-IFNRN---YERAK 404
+ + GK +VGAGGA A+ A G + + +FNR +ERA+
Sbjct: 120 ------------NNIDVIGKKMTIVGAGGAATAIEIQAALDGVKELSVFNRKDEFWERAQ 167
Query: 405 --------------ALADAVSGEALHFEYLHEFFPEKGMILANASAIGMEPNSDQSPVPK 450
L D E+L E + + ANA+ +GM+P Q +P
Sbjct: 168 QNVKNINEKTNCKATLYDLADTESLRREIADSY------LFANATGVGMKPLEGQMVIPD 221
Query: 451 EALKAYEL-VFDAVYTPRNTRLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDF 509
+ EL V D VY P T+LL A VG ++G+ M + Q F ++TG P ++
Sbjct: 222 ASFLRPELIVTDVVYMPEKTKLLEVAESVGCKNMNGMGMMLYQGAAAFEMWTGKEMPIEY 281
Query: 510 MRKLVLEQF 518
M++++ F
Sbjct: 282 MKEILNIHF 290
>gi|196248990|ref|ZP_03147690.1| shikimate 5-dehydrogenase [Geobacillus sp. G11MC16]
gi|196211866|gb|EDY06625.1| shikimate 5-dehydrogenase [Geobacillus sp. G11MC16]
Length = 276
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 96/292 (32%), Positives = 143/292 (48%), Gaps = 31/292 (10%)
Query: 238 KIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLV--DDVKEFFRTYSGTDFAGFSVG 295
++GL+ PV HS P++HN AF + + Y V + V E AG +V
Sbjct: 3 NVYGLLGFPVEHSLSPLMHNDAFAYFGISARYHLFSVKPEQVGEAIAGVRALGIAGVNVT 62
Query: 296 IPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALRERQGI 355
IPHK + DEV A+ IGAVNTI+ G+L+GYNTD + A+E+ +
Sbjct: 63 IPHKMAVIPFLDEVDEHARRIGAVNTIVND--SGRLIGYNTDGPGYVKALEEEM------ 114
Query: 356 NGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGA-RVIIFNRNYERAKALADAVSGEA 414
+ GK +L+GAGG R + F S A R+ I NR E+A L GE
Sbjct: 115 ------DIHLDGKRILLIGAGGGARGIYFSLLSTAAERIDIANRTAEKAARLI----GEG 164
Query: 415 LHFEYLHEFFP----EKGM----ILANASAIGMEPNSDQSPVPKEALKAYELVFDAVYTP 466
E FFP E+ + I+ N +++GM P+ D+ P+ + ++ +V D +Y P
Sbjct: 165 --DERRSTFFPLAEAERRLAEYDIIINTTSVGMHPHVDEQPLSLQQMRPGTVVSDIIYNP 222
Query: 467 RNTRLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRKLVLEQF 518
T+ L+EA GA V +GV M + Q F +TG + M++LV+ Q
Sbjct: 223 LETKWLKEAKARGARVQNGVGMLVYQGALAFEKWTGQWPDVNRMKQLVINQL 274
>gi|448738769|ref|ZP_21720790.1| shikimate 5-dehydrogenase [Halococcus thailandensis JCM 13552]
gi|445801155|gb|EMA51499.1| shikimate 5-dehydrogenase [Halococcus thailandensis JCM 13552]
Length = 273
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 102/284 (35%), Positives = 133/284 (46%), Gaps = 23/284 (8%)
Query: 238 KIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLVD--DVKEFFRTYSGTDFAGFSVG 295
++FGLV +PV HS P LH A+R + YV D D+ G +V
Sbjct: 2 QVFGLVGSPVAHSLSPPLHEAAYRELGIDARYVTFEPDPDDLAAAIDGARALGIQGLNVT 61
Query: 296 IPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDG-KLVGYNTDCESAISAIEDALRERQG 354
IP K C E LA IGA+NT+ G ++ G+NTD G
Sbjct: 62 IPFKRDVRDYC-EPDELAARIGAINTL---DFGGERVTGHNTDA--------------IG 103
Query: 355 INGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGARVIIFNRNYERAKALADAVSGEA 414
+ +H V+VGAGGAGRA AF G V I NR ERA LA + G
Sbjct: 104 VTRAFAHHDVSLSGRAVVVGAGGAGRAAAFALADEGTTVAITNRTAERAHELASEIDGAT 163
Query: 415 LHFEYLHEFFPEKGMILANASAIGMEPNSDQSPVPKEALKAYELVFDAVYTPRNTRLLRE 474
H + IL NA+++GM + D SPV EAL V DAVY+P TRLLRE
Sbjct: 164 GHGLDDLDELLVDADILVNATSVGM--DEDVSPVDSEALHGDLAVLDAVYSPIETRLLRE 221
Query: 475 AAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRKLVLEQF 518
AA GAT + G M + Q + F +TG AP + M +++ E+
Sbjct: 222 AAATGATTIDGGWMLLYQGVAAFERWTGRTAPVETMNEVLRERL 265
>gi|320334938|ref|YP_004171649.1| shikimate dehydrogenase [Deinococcus maricopensis DSM 21211]
gi|319756227|gb|ADV67984.1| Shikimate dehydrogenase [Deinococcus maricopensis DSM 21211]
Length = 279
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 84/268 (31%), Positives = 127/268 (47%), Gaps = 23/268 (8%)
Query: 242 LVSNPVGHSKGPILHNPAFRHTRFNGIY--VPMLVDDVKEFFRTYSGTDFAGFSVGIPHK 299
L ++P HS P +H AFR + Y V + D+ D G ++ +PHK
Sbjct: 21 LYADPAAHSLSPRMHAAAFRFAGLDATYDAVRVPAADLPGAIAALRAPDVLGANLSLPHK 80
Query: 300 EPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALRERQGINGVA 359
A+ D + P A++IGAVNT+I DG L G NTD ++A+ DA G++ V
Sbjct: 81 AAALPHLDALTPAARAIGAVNTVIH--ADGTLTGDNTDAPGLLAALRDAHAPAGGVSVVL 138
Query: 360 SHTSPIAGKIFVLVGAGGAGRALAFGAKSRGARVIIFNRNYERAKALADAVSGEALHFEY 419
++ L ++ G V+I NR + A+ALA + G A+ E
Sbjct: 139 GAGGAARAAVWAL--------------RAEGRDVLILNRTLDNARALARDLGGTAVTRED 184
Query: 420 LHEFFPEKGMILANASAIGMEPNSDQSPVPKE-ALKAYELVFDAVYTPRNTRLLREAAEV 478
+ ++ NAS+ G+ + D +P+P AL LV+D VY PR+TRL+R+A
Sbjct: 185 VPWL---DITLIVNASSAGLG-DPDATPLPDPPALARGALVYDMVYKPRDTRLMRDARAR 240
Query: 479 GATVVSGVEMFIRQALGQFRLFTGGLAP 506
GA +G+ M QA F +TG P
Sbjct: 241 GARTANGLGMLAHQARLAFTAWTGADVP 268
>gi|78189310|ref|YP_379648.1| quinate/shikimate 5-dehydrogenase [Chlorobium chlorochromatii CaD3]
gi|123579620|sp|Q3AQX0.1|AROE_CHLCH RecName: Full=Shikimate dehydrogenase
gi|78171509|gb|ABB28605.1| shikimate dehydrogenase [Chlorobium chlorochromatii CaD3]
Length = 287
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 102/306 (33%), Positives = 154/306 (50%), Gaps = 42/306 (13%)
Query: 233 INPDTKIFGLVSNPVGHSKGPILHNPAFR-------HTRFNGIYVPMLVDDVKEFFRTYS 285
+N T+IF L+ V +S P++HN AF+ +T FN I LV D R
Sbjct: 1 MNSSTRIFALLGRAVDYSYSPLIHNTAFQALGLPYHYTIFN-IAEAALVGDA---LRGAR 56
Query: 286 GTDFAGFSVGIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAI 345
GFSV IP+K+ V DE+ A +I AVN I+ + +GKL+GYNTD S +
Sbjct: 57 ALGLGGFSVTIPYKQTVVPFLDELSEEATTIQAVNCIVNK--NGKLIGYNTDILGFASPL 114
Query: 346 EDALRERQGINGVASHTSPIAGKIFVLVGAGGAGRAL--AFGAKSRGARVIIFNRNYERA 403
A RE A H + IA L G+GGA A AF +V++F R+ ++A
Sbjct: 115 -FAYRE-------ALHGATIA-----LFGSGGAALAAIEAFQRYFTPKQVLLFARDSQKA 161
Query: 404 KA-LADAVSGEALHFEYL-------HEFFPEKGMILANASAIGMEPNSDQS---PVPKEA 452
K+ L +++ E + L +E E +++ NA+ +G + +D S P+
Sbjct: 162 KSQLRSSLALE--RYTNLAIVPLSDYERVRECRLVI-NATPLGTKGRADGSAIIPLESNL 218
Query: 453 LKAYELVFDAVYTPRNTRLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRK 512
L + +V+D VY P T LL+ A VGA+ + G+EM I QA F L+TG P + +R+
Sbjct: 219 LHSEHIVYDMVYNPTITPLLQAAQAVGASTIFGIEMLIGQAEQAFTLWTGEKMPTELVRQ 278
Query: 513 LVLEQF 518
V+ +
Sbjct: 279 TVMAKL 284
>gi|397906480|ref|ZP_10507280.1| Shikimate 5-dehydrogenase I alpha [Caloramator australicus RC3]
gi|397160437|emb|CCJ34617.1| Shikimate 5-dehydrogenase I alpha [Caloramator australicus RC3]
Length = 271
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 74/269 (27%), Positives = 129/269 (47%), Gaps = 24/269 (8%)
Query: 237 TKIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLV--DDVKEFFRTYSGTDFAGFSV 294
+I+GL+ +G+S PI+HN + NG+Y V D + F + G +V
Sbjct: 2 NEIYGLLGKKLGYSFSPIIHNIILKELNINGLYCLFEVEEDKLNLAFEGFKILKIKGINV 61
Query: 295 GIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALRERQG 354
IP+K + DE+ AK+IG++NTI + ++G +GYNTD I ++
Sbjct: 62 TIPYKIKTIELVDELSLEAKNIGSINTI--KFMEGYSIGYNTDYFGFIRSL--------- 110
Query: 355 INGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGARVII-FNRNYERAKALADAVSGE 413
+ + + KI ++G GGA RA+ K ++ II RN + K L +
Sbjct: 111 ----SKYNIDVKNKIVYVLGTGGASRAVIQALKDLNSKKIIAVTRNKKNKKDL------D 160
Query: 414 ALHFEYLHEFFPEKGMILANASAIGMEPNSDQSPVPKEALKAYELVFDAVYTPRNTRLLR 473
+Y KG IL N + +GM P+ D P+ ++ + + +V+D +Y P+ T L++
Sbjct: 161 VELIDYYELSKKGKGDILINCTPLGMNPDLDILPIERDIIANFSIVYDLIYNPKETILMK 220
Query: 474 EAAEVGATVVSGVEMFIRQALGQFRLFTG 502
A + +G+ M + QA+ ++ G
Sbjct: 221 WAKQFNIPSYNGMAMLVYQAIKAQEVWNG 249
>gi|365106814|ref|ZP_09335227.1| quinate/shikimate dehydrogenase [Citrobacter freundii 4_7_47CFAA]
gi|363641798|gb|EHL81173.1| quinate/shikimate dehydrogenase [Citrobacter freundii 4_7_47CFAA]
Length = 288
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 91/293 (31%), Positives = 141/293 (48%), Gaps = 32/293 (10%)
Query: 238 KIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLVDDVKEFFRTYSGTD---FAGFSV 294
++ GL++ P+ HS P + N A Y+ VD+ F +G G V
Sbjct: 8 ELIGLMAYPIRHSLSPEMQNKALEKAGLPFTYMAFEVDN-STFANAIAGLKALKMRGTGV 66
Query: 295 GIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALRERQG 354
+P+K+ A DE+ P AK +GA+NTI+ DG L GYNTD I AI+++ G
Sbjct: 67 SMPNKQLACEYVDELTPAAKLVGAINTIVND--DGYLRGYNTDGTGHIRAIKES-----G 119
Query: 355 INGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGARVI-IFNRN---YERAKALADAV 410
+ I GK VL+GAGGA A+ A G + I +FNR + +A+ A V
Sbjct: 120 FD--------IKGKTMVLLGAGGASTAIGAQAAIEGIKEIKLFNRQDEFFTKAQEFAKRV 171
Query: 411 SGEALHFEYLHEFFPEKGM--------ILANASAIGMEPNSDQSPVPKEALKAYEL-VFD 461
+ + + + IL N + +GM+P ++S V AL EL V +
Sbjct: 172 NENTDCVVTVIDLADRQAFADALASADILTNGTKVGMKPLENESLVTDAALLRPELLVTE 231
Query: 462 AVYTPRNTRLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRKLV 514
VY P T+LL++A G + G M + Q QF+L+TG P D++++++
Sbjct: 232 CVYNPHMTKLLQQAQNAGCKTIDGYGMLLWQGAEQFKLWTGKDFPLDYVKQVM 284
>gi|398868804|ref|ZP_10624196.1| shikimate 5-dehydrogenase [Pseudomonas sp. GM78]
gi|398232420|gb|EJN18385.1| shikimate 5-dehydrogenase [Pseudomonas sp. GM78]
Length = 271
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 80/264 (30%), Positives = 128/264 (48%), Gaps = 20/264 (7%)
Query: 255 LHNPAFRHTRFNGIYVPMLVDDVKEFFRTYSGTDFAGFSVGIPHKEPAVACCDEVHPLAK 314
+HN A+ + +V V+D G +V +P+K + D+V A+
Sbjct: 23 IHNAAYAALGLDYTFVCFGVEDPVAAVAAIRALGVRGMNVSMPYKTAVMPYLDKVDESAR 82
Query: 315 SIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALRERQGINGVASHTSPIAGKIFVLVG 374
IGAVNTI +DG L GYNTD A+ A+++ R K ++G
Sbjct: 83 VIGAVNTI--NNVDGVLTGYNTDYLGAVRALQEVTELRD--------------KRIAVIG 126
Query: 375 AGGAGRALAFGAKSRGARVIIFNRNYERAKALADAVSGEALHFEYLHEFFPEKGMILANA 434
AGGA RA+ +G V +FNR+ ER ALA+ + A + F + I+ NA
Sbjct: 127 AGGAARAVVYGCLQAAGEVTVFNRSIERGTALAEDLG--ARWGGSIEAFTAKSFDIVINA 184
Query: 435 SAIGMEPNSDQSPVPKEALKAYELVFDAVYTPRNTRLLREAAEVGATVVSGVEMFIRQAL 494
+++G + D +P+ L ++ +V D + P +T LL +A +G + V+G M + QA
Sbjct: 185 TSVGFK-QPDSNPLDGR-LASHLIVMDVAFMPVHTALLLQAKALGCSTVAGTRMLVHQAC 242
Query: 495 GQFRLFTGGLAPEDFMRKLVLEQF 518
Q L+TG AP D M + +L++
Sbjct: 243 RQIELYTGKEAPIDIMEQAMLQEI 266
>gi|296413789|ref|XP_002836591.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295630419|emb|CAZ80782.1| unnamed protein product [Tuber melanosporum]
Length = 1554
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 140/530 (26%), Positives = 233/530 (43%), Gaps = 74/530 (13%)
Query: 21 EEMQASIEQAKVEGADLVELCIDSM----------EFSHISEVDKLIQHPT-LPAIVSYR 69
EE+ +I + G+D VE+ ID + + +SE +++ T LP + + R
Sbjct: 1045 EEVTGAINSVTI-GSDAVEVRIDLLIDPTDSNGVATPAFVSEQLAVLRGKTQLPVVFTIR 1103
Query: 70 LKSSRKSSDEACKNTCLQVLRRALDLDVEFVEMD--YEVASDPLMSEIIYSRSNTKIIVS 127
KS + L++ + + +E+++++ + VA L+ ++ + +KII S
Sbjct: 1104 TKSQGGKFPDEDHQRALELYLAGIRMGLEYIDLETTWPVA---LLEKVTSGKGYSKIIAS 1160
Query: 128 SYLNGGGKPTTEKLGDVIACMQATGADVMKLEIAVDSITD---LAPVFEMLTHCQVPLIA 184
+ GG M DV+KL SI D L + + +IA
Sbjct: 1161 HHDLGGDLCWRNASWISKFNMTLKYGDVIKLIGQAKSIQDNYDLENFRKYAATHETRMIA 1220
Query: 185 LAVGSRGLISQLLGPKFGGFLVYGSLGGKSVPGLPTLVSLKQVYQLEHINPDTKIFGLVS 244
L +G +G +S++L F + + +L K+ PG + V + Q L + +TK F +
Sbjct: 1221 LNMGEKGKLSRILN-TFLTPVTHPALPFKAAPGQLSTVEIHQALSLMGM-LETKKFYIFG 1278
Query: 245 NPVGHSKGPILHNPAFRHTRFNGIYVPMLVDDVKEFFRTYSGTDFAGFSVGIPHKEPAVA 304
P+ HS+ P LHN F+ Y DV + +F G SV IPHK +
Sbjct: 1279 TPLSHSRSPALHNTLFQSLGLPHTYHLFESADVSATKEIMNTENFGGASVTIPHKISIIP 1338
Query: 305 CCDEVHPLAKSIGAVNTIIRRPI---DG--KLVGYNTDCESAISAIEDALRERQGINGVA 359
+ A++IGAVNT+I P+ DG +L G N D I+++LR G
Sbjct: 1339 LLSSISAHAQAIGAVNTVI--PVTTEDGTRRLTGDNFDW----VGIQNSLR-IGGATEPE 1391
Query: 360 SHTSPIAGKIFVLVGAGGAGRALAFGAKSRG-ARVIIFNRNYERAKALADAVSGEALHFE 418
H++ A +++GAGG RA + G R+ + NR E K+L +A
Sbjct: 1392 GHSTATA----LVIGAGGTSRAAVYALHMMGYGRIYVVNRTPENLKSLVEA--------- 1438
Query: 419 YLHEFFPEKGMI-----LANASAIGMEPNSDQSPVP-----KEALKA--YEL-------- 458
FP++ + LA A ++ ++P + VP +ALK +EL
Sbjct: 1439 -----FPKEYNLMAINSLAEAKSVEVKPITAVCTVPADKPIDDALKVILWELLAGGACAG 1493
Query: 459 -VFDAVYTPRNTRLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPE 507
+ + Y P T ++ A G VV G+E + Q + QF +FTGG+ PE
Sbjct: 1494 VLTEMAYKPTVTEVMTLAEGAGWRVVPGLEGLVGQGVAQFEVFTGGIVPE 1543
>gi|86136752|ref|ZP_01055330.1| shikimate 5-dehydrogenase [Roseobacter sp. MED193]
gi|85826076|gb|EAQ46273.1| shikimate 5-dehydrogenase [Roseobacter sp. MED193]
Length = 277
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 94/273 (34%), Positives = 133/273 (48%), Gaps = 19/273 (6%)
Query: 236 DTKI--FGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLVD--DVKEFFRTYSGTDFAG 291
D KI G++ PV HSK P L + G YVPM V+ D++ RT F G
Sbjct: 3 DKKIPLAGVIGCPVAHSKSPQLQTHWLKTHGIAGHYVPMHVEPEDLETVIRTLPKAGFVG 62
Query: 292 FSVGIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALRE 351
+V IPHKE + D+V AK +GA NTII R DG ++ NTD I+ ++
Sbjct: 63 VNVTIPHKEAVMKIADKVTDRAKLMGAANTIIFRS-DGSILADNTDGYGFITNLQ----- 116
Query: 352 RQGINGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGA-RVIIFNRNYERAKALADAV 410
QG A P +G VL GAGGA RA+ G +++ NR ERA+ L
Sbjct: 117 -QG----APDWVPTSGPAAVL-GAGGACRAVVASLIEAGVPEILLTNRTRERAEQLHSDF 170
Query: 411 SGEALHFEY-LHEFFPEKGMILANASAIGMEPNSDQSPVPKEALKAYELVFDAVYTPRNT 469
++ L E ++ N +++GM + VP + LK +V D +Y+P T
Sbjct: 171 GKRIQVVDWVLAGNIIEDAALVVNTTSLGMV-GKPRLRVPLDGLKPNMVVTDLIYSPLKT 229
Query: 470 RLLREAAEVGATVVSGVEMFIRQALGQFRLFTG 502
LL+ A E+G TVV G+ M + QA+ F + G
Sbjct: 230 NLLQTAEEMGCTVVDGLGMLLHQAVPGFERWFG 262
>gi|448613450|ref|ZP_21663330.1| shikimate 5-dehydrogenase [Haloferax mucosum ATCC BAA-1512]
gi|445740347|gb|ELZ91853.1| shikimate 5-dehydrogenase [Haloferax mucosum ATCC BAA-1512]
Length = 269
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 106/280 (37%), Positives = 137/280 (48%), Gaps = 28/280 (10%)
Query: 238 KIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLVD--DVKEFFRTYSGTDFAGFSVG 295
+++GLV NPVGHS P +H A+ H + YV + + +G +V
Sbjct: 2 QVYGLVGNPVGHSLSPPMHEAAYEHVGLDARYVSFEPEPSALAAALDGADALGISGLNVT 61
Query: 296 IPHKEPAVACCDEVHPLAKSIGAVNTI---IRRPIDGKLVGYNTDCESAISAIEDALRER 352
IP K+ + D PLA IGAVNTI P G+NTD A E
Sbjct: 62 IPFKQDVLDLVDS-DPLATRIGAVNTIDFGCDEP-----TGHNTDAAGVTRAFE------ 109
Query: 353 QGINGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGARVIIFNRNYERAKALADAVSG 412
H + G V+VGAGGAGRA+AF GA V I NR E A LADAV G
Sbjct: 110 -------RHDVALDGATAVVVGAGGAGRAVAFALADAGASVHIANRTAETAVELADAVPG 162
Query: 413 -EALHFEYLHEFFPEKGMILANASAIGMEPNSDQSPVPKEALKAYELVFDAVYTPRNTRL 471
A + L +L NA+++GME + D+SPVP L + V DAVYTP TRL
Sbjct: 163 ATAGGLDTLDRI--RDATVLVNATSVGME-SPDESPVPAAHLHSDLAVLDAVYTPLETRL 219
Query: 472 LREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMR 511
LR+AA+ GA + G M + Q + F L+TG AP + M
Sbjct: 220 LRDAADAGAVTIDGAWMLLLQGVEAFELWTGLDAPVEKMN 259
>gi|418076569|ref|ZP_12713804.1| shikimate 5-dehydrogenase [Streptococcus pneumoniae GA47502]
gi|353748272|gb|EHD28925.1| shikimate 5-dehydrogenase [Streptococcus pneumoniae GA47502]
Length = 284
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 89/296 (30%), Positives = 146/296 (49%), Gaps = 33/296 (11%)
Query: 237 TKIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLVD--DVKEFFRTYSGTDFAGFSV 294
T++ +V+NP+ HS P +HN AF T NG YV ++ D+ E G ++
Sbjct: 7 TRLAAVVANPIKHSISPFIHNRAFEATATNGAYVAWEIEASDLAETVANIRRYQMFGVNL 66
Query: 295 GIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALRERQG 354
+P+KE + DE+ A+ IGAVNT++ +G L+GYNTD + +
Sbjct: 67 SMPYKEQVIPYLDELSDEARLIGAVNTVVNE--NGNLIGYNTDGKGFFKCL--------- 115
Query: 355 INGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRG-ARVIIFNR--NYERAKALADAVS 411
S T I+GK L+GAGGA +++ A G +++ +F R + E+ + D +
Sbjct: 116 ----PSFT--ISGKKMTLLGAGGAAKSILAQAILDGVSQISVFVRSVSMEKTRPYLDKLQ 169
Query: 412 GEA------LHFEYLHEFFPE--KGMILANASAIGMEPNSDQSPVPKE-ALKAYELVFDA 462
+ EY+ E + +L NA+++GM+ S SPVP+ L LV D
Sbjct: 170 EQTGFKVDLCALEYVSELQARIAESDLLVNATSVGMDGQS--SPVPENIVLPETLLVADI 227
Query: 463 VYTPRNTRLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRKLVLEQF 518
+Y P T L+ A G V+G+ M + QA F+L+TG P + + + + E++
Sbjct: 228 IYQPFETPFLKWARSQGNPAVNGLGMLLYQAAEAFQLWTGKEMPTEEIWQSLTEKY 283
>gi|226500348|ref|NP_001145452.1| uncharacterized protein LOC100278835 [Zea mays]
gi|195656449|gb|ACG47692.1| hypothetical protein [Zea mays]
Length = 92
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 54/90 (60%), Positives = 71/90 (78%), Gaps = 1/90 (1%)
Query: 429 MILANASAIGMEPNSDQSPVPKEALKAYELVFDAVYTPRNTRLLREAAEVGATVVSGVEM 488
MILANA+++GM PN D++P+ K ALK+Y +VFDAV+ PR TRLLREAA GATV+ G+EM
Sbjct: 1 MILANATSVGMHPNVDETPLSKRALKSYAVVFDAVFVPRETRLLREAAACGATVIDGLEM 60
Query: 489 FIRQALGQFRLFTGGL-APEDFMRKLVLEQ 517
IR + QF+LFTGG+ APE MR+ +L +
Sbjct: 61 LIRLVMVQFKLFTGGMTAPERLMREAILTK 90
>gi|418200417|ref|ZP_12836862.1| shikimate 5-dehydrogenase [Streptococcus pneumoniae GA47976]
gi|419523637|ref|ZP_14063214.1| shikimate 5-dehydrogenase [Streptococcus pneumoniae GA13723]
gi|73915798|gb|AAZ92767.1| shikimate 5-dehydrogenase [Streptococcus pneumoniae]
gi|73915828|gb|AAZ92782.1| shikimate 5-dehydrogenase [Streptococcus pneumoniae]
gi|73915862|gb|AAZ92799.1| shikimate 5-dehydrogenase [Streptococcus pneumoniae]
gi|353865464|gb|EHE45373.1| shikimate 5-dehydrogenase [Streptococcus pneumoniae GA47976]
gi|379556812|gb|EHZ21860.1| shikimate 5-dehydrogenase [Streptococcus pneumoniae GA13723]
Length = 284
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 89/296 (30%), Positives = 146/296 (49%), Gaps = 33/296 (11%)
Query: 237 TKIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLVD--DVKEFFRTYSGTDFAGFSV 294
T++ +V+NP+ HS P +HN AF T NG YV ++ D+ E G ++
Sbjct: 7 TRLAAVVANPIKHSISPFIHNRAFEATATNGAYVAWEIEASDLAETVANIRRYQMFGINL 66
Query: 295 GIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALRERQG 354
+P+KE + DE+ A+ IGAVNT++ +G L+GYNTD + +
Sbjct: 67 SMPYKEQVIPYLDELSDEARLIGAVNTVVNE--NGNLIGYNTDGKGFFKCL--------- 115
Query: 355 INGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRG-ARVIIFNR--NYERAKALADAVS 411
S T I+GK L+GAGGA +++ A G +++ +F R + E+ + D +
Sbjct: 116 ----PSFT--ISGKKMTLLGAGGAAKSILAQAILDGVSQISVFVRSVSMEKTRPYLDKLQ 169
Query: 412 GEA------LHFEYLHEFFPE--KGMILANASAIGMEPNSDQSPVPKE-ALKAYELVFDA 462
+ EY+ E + +L NA+++GM+ S SPVP+ L LV D
Sbjct: 170 EQTGFKVDLCALEYVSELQARIAESDLLVNATSVGMDGQS--SPVPENIVLPETLLVADI 227
Query: 463 VYTPRNTRLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRKLVLEQF 518
+Y P T L+ A G V+G+ M + QA F+L+TG P + + + + E++
Sbjct: 228 IYQPFETPFLKWARSQGNPAVNGLGMLLYQAAEAFQLWTGKEMPTEEIWQSLTEKY 283
>gi|407455557|ref|YP_006734448.1| shikimate 5-dehydrogenase [Chlamydia psittaci GR9]
gi|407458292|ref|YP_006736597.1| shikimate 5-dehydrogenase [Chlamydia psittaci WS/RT/E30]
gi|407460913|ref|YP_006738688.1| shikimate 5-dehydrogenase [Chlamydia psittaci WC]
gi|449071371|ref|YP_007438451.1| bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase
protein [Chlamydophila psittaci Mat116]
gi|405782100|gb|AFS20849.1| shikimate 5-dehydrogenase [Chlamydia psittaci GR9]
gi|405784707|gb|AFS23453.1| shikimate 5-dehydrogenase [Chlamydia psittaci WS/RT/E30]
gi|405787510|gb|AFS26254.1| shikimate 5-dehydrogenase [Chlamydia psittaci WC]
gi|449039879|gb|AGE75303.1| bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase
protein [Chlamydophila psittaci Mat116]
Length = 477
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 106/413 (25%), Positives = 185/413 (44%), Gaps = 42/413 (10%)
Query: 94 DLDVEFVEMDYEVASDPLMSEIIYSRSNTKIIVSSYLNGGGKPTTEKLGDVIACMQATGA 153
+L E++++D + + L ++I + N KII+S + T+E + ++ M A
Sbjct: 77 ELQPEYLDIDKDFPKEAL-AKIQKNYLNIKIILSYH-----SDTSEHIPNLCNEMLRRQA 130
Query: 154 DVMKLEIAVDSITDLAPVFEMLTHCQVPLIALAVGSRGLISQLLGPKFGGFLVYGSLGGK 213
K+ I D ++ H L +G+ G+ S++L P + Y S G
Sbjct: 131 HHYKIAITSTKSIDTLRCIQIKQHLPENTTLLCMGNAGIASRILSPLMKNAINYAS--GI 188
Query: 214 SVPGLPT-LVSLKQV--YQLEHINPDTKIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYV 270
+ P + +S++ + Y +++ +++I+GL+ NPV S + HN F + N Y+
Sbjct: 189 NAPKVAQGQLSIEDLLAYNYTNLSSESRIYGLIGNPVDRSISHLSHNKLFSELQLNMSYI 248
Query: 271 PMLVD--DVKEFFRTYSGTDFAGFSVGIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPID 328
+L+ ++ EFF F G SV +P K + D + P + + NT++ R D
Sbjct: 249 KILLTPYELNEFFSLTRDLPFGGLSVTMPFKTDVLEYIDILDPSVQQCQSCNTLVFR--D 306
Query: 329 GKLVGYNTDCESAISAIEDALRERQGINGVASHTSPIAGKIFVLVGAGGAGRALAFGAKS 388
K+ GYNTD ++ L +R+ I H +VG+GG+ +A+A
Sbjct: 307 NKIAGYNTDGLGLLN-----LLKRKNILLQNKHVG--------IVGSGGSAKAIATTFAD 353
Query: 389 RGARVIIFNRNYERAKALADAVSGEALHFEYLHEFFPEKGMILANASAIGMEPNSDQSPV 448
GA++ IFNR A+ L+ G+A L E +IL P
Sbjct: 354 SGAQISIFNRTKTHAEKLSVLCHGQAFPLNALSENHNIDILILC-------------LPP 400
Query: 449 PKEALKAY-ELVFDAVYTPRNTRLLREAAEVGATVVSGVEMFIRQALGQFRLF 500
E + Y ++ D P+ + ++A E G ++ G EMF QAL QF L+
Sbjct: 401 DVEIPEIYPPVIIDINTLPKESLYTKKAKERGCQILYGYEMFAEQALLQFSLW 453
>gi|451342998|ref|ZP_21912077.1| shikimate 5-dehydrogenase [Eggerthia catenaformis OT 569 = DSM
20559]
gi|449338366|gb|EMD17515.1| shikimate 5-dehydrogenase [Eggerthia catenaformis OT 569 = DSM
20559]
Length = 283
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 80/290 (27%), Positives = 130/290 (44%), Gaps = 27/290 (9%)
Query: 237 TKIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLVDDVKEFFRTYSGTDFAGFSVGI 296
T++ G++++P+ HS P++HN F + + +Y+ + +KE G++V +
Sbjct: 7 TQLIGIIADPIRHSLSPMMHNACFEYLNLDYVYLAFETEALKETIEGLKAIKARGWNVSM 66
Query: 297 PHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALRERQGIN 356
P+K+ + DE+ +++ +VNT+I G L G +TD L + G+
Sbjct: 67 PYKKRIIPYLDEISLVSQLSDSVNTVINDQ--GYLKGTSTD----------GLGWKYGLK 114
Query: 357 GVASHTSPIAGKIFVLVGAGGAGRA-LAFGAKSRGARVIIFNRNYERAKALADAVSGEAL 415
I K VL+GAGGA A +A GA + +F R + + + +
Sbjct: 115 ---EKNISIQDKTLVLLGAGGAATAIMAQGAIDGLKEIYVFKRKNQTWSQIQERIEHMMS 171
Query: 416 HFEYL--------HEFFPEK---GMILANASAIGMEPNSDQSPVPKEALKAYELVFDAVY 464
H E EK IL NA+ IGM P+ + + +E L VFD +Y
Sbjct: 172 HTNTQIILCDIEDKELLKEKISDADILTNATDIGMSPHDKECLIDREWLHKDLTVFDCIY 231
Query: 465 TPRNTRLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRKLV 514
P T LL+ A E G +SG+ M + Q F L+T P D RK +
Sbjct: 232 HPLETLLLQYAKEKGCMCISGLSMLLYQGAVSFELWTNRKMPIDIARKAI 281
>gi|387626635|ref|YP_006062810.1| shikimate 5-dehydrogenase [Streptococcus pneumoniae INV104]
gi|301794420|emb|CBW36853.1| shikimate 5-dehydrogenase [Streptococcus pneumoniae INV104]
Length = 284
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 89/296 (30%), Positives = 146/296 (49%), Gaps = 33/296 (11%)
Query: 237 TKIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLVD--DVKEFFRTYSGTDFAGFSV 294
T++ +V+NP+ HS P +HN AF T NG YV ++ D+ E G ++
Sbjct: 7 TRLAAVVANPIKHSISPFIHNRAFEATATNGAYVAWEIEASDLVETVANIRRYQMFGINL 66
Query: 295 GIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALRERQG 354
+P+KE + DE+ A+ IGAVNT++ +G L+GYNTD + +
Sbjct: 67 SMPYKEQVIPYLDELSDEARLIGAVNTVVNE--NGNLIGYNTDGKGFFKCL--------- 115
Query: 355 INGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRG-ARVIIFNR--NYERAKALADAVS 411
S T I+GK L+GAGGA +++ A G +++ +F R + E+ + D +
Sbjct: 116 ----PSFT--ISGKKMTLLGAGGAAKSILAQAILDGVSQISVFVRSVSMEKTRPYLDKLQ 169
Query: 412 GEA------LHFEYLHEFFPE--KGMILANASAIGMEPNSDQSPVPKE-ALKAYELVFDA 462
+ EY+ E + +L NA+++GM+ S SPVP+ L LV D
Sbjct: 170 EQTGFKVDLCALEYVSELQARIAESDLLVNATSVGMDGQS--SPVPENIVLPETLLVADI 227
Query: 463 VYTPRNTRLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRKLVLEQF 518
+Y P T L+ A G V+G+ M + QA F+L+TG P + + + + E++
Sbjct: 228 IYQPFETPFLKWARSQGNPAVNGLGMLLYQAAEAFQLWTGKKMPTEEIWQSLTEKY 283
>gi|78043133|ref|YP_359479.1| shikimate 5-dehydrogenase [Carboxydothermus hydrogenoformans
Z-2901]
gi|123576787|sp|Q3AEF5.1|AROE_CARHZ RecName: Full=Shikimate dehydrogenase
gi|77995248|gb|ABB14147.1| shikimate 5-dehydrogenase [Carboxydothermus hydrogenoformans
Z-2901]
Length = 280
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 94/291 (32%), Positives = 149/291 (51%), Gaps = 26/291 (8%)
Query: 233 INPDTKIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLV--DDVKEFFRTYSGTDFA 290
IN +TK+ G++ P+ H+ P +HN AF+ N +Y+P+ V + + + +F
Sbjct: 3 INGETKLTGIIGYPLKHTLSPQMHNEAFKALNLNFLYLPLEVAEESLPQAIYGLKAFNFR 62
Query: 291 GFSVGIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALR 350
G +V IP+KE DEV AK+IGAVNTI+ G+L+GYNTD + ++++
Sbjct: 63 GINVTIPYKEKVFPFLDEVATEAKTIGAVNTIVHD--RGRLIGYNTDAPGFLLSLKENDV 120
Query: 351 ERQGINGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGARVIIFNRNYERAKALADAV 410
E + GK +L+GAGGA RA+A+ + GA +II NR ++AK LA
Sbjct: 121 E-------------VTGKKVLLLGAGGAARAVAYALLTAGAELIIANRTIDKAKELAKDF 167
Query: 411 SGEALHFEYLHEFFPEKGMILA------NASAIGMEPNSDQSP-VPKEALKAYELVFDAV 463
G E L +K + LA N +GM P +Q P V + + + +D +
Sbjct: 168 QGVGKISEILE--LGDKPISLAPYHMAVNTLPLGMHPYENQMPAVDFTGVTSDFVAYDLI 225
Query: 464 YTPRNTRLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRKLV 514
Y P T+ L+ + E GA ++G+ M + Q + F +TG P M+K +
Sbjct: 226 YNPAETKFLKASKEKGARTINGLSMLLWQGVLAFEKWTGVSPPVKVMKKAI 276
>gi|420206086|ref|ZP_14711596.1| shikimate dehydrogenase [Staphylococcus epidermidis NIHLM008]
gi|394277925|gb|EJE22242.1| shikimate dehydrogenase [Staphylococcus epidermidis NIHLM008]
Length = 269
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 84/285 (29%), Positives = 141/285 (49%), Gaps = 28/285 (9%)
Query: 240 FGLVSNPVGHSKGPILHNPAFRHTRFNGIY--VPMLVDDVKEFFRTYSGTDFAGFSVGIP 297
F ++ NP+ HS P++H+ F+ Y + + V+ + + S GF+V IP
Sbjct: 3 FAVIGNPISHSLSPLMHHANFQSLNLENTYEAINVPVNQFQNIKKIISEKSIDGFNVTIP 62
Query: 298 HKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALRERQGING 357
HKE + D+++ AKS+GAVNT++ + DGK +GYNTD + NG
Sbjct: 63 HKERIIPYLDDINEQAKSVGAVNTVLVK--DGKWIGYNTDGIGYV-------------NG 107
Query: 358 VASHTSPIAGKIFVLVGAGGAGRALAFG-AKSRGARVIIFNRNYERAKALADAVSGEAL- 415
+ I +++GAGGA + +A K + + NR R + ++ L
Sbjct: 108 LKQIYEGIEDAYILILGAGGASKGIANELYKIVRPTLTVANRTMSRFNNWSLNINKINLS 167
Query: 416 HFE-YLHEFFPEKGMILANASAIGMEPNSDQSPVPKEALKAYELVFDAVYTPRNTRLLRE 474
H E +L EF I+ N + GM N+D S + L ++ LV D VY P T +L E
Sbjct: 168 HAERHLDEF-----DIIINTTPAGMNGNTD-SVISLNRLASHTLVSDIVYNPYKTPILIE 221
Query: 475 AAEVGATVVSGVEMFIRQALGQFRLFTGGLAPE-DFMRKLVLEQF 518
A + G + +G++MF+ Q F+++T L P+ + M+ +V+ +
Sbjct: 222 AEQRGNPIYNGLDMFVHQGAESFKIWT-NLEPDIEAMKNIVIHKL 265
>gi|327351195|gb|EGE80052.1| 3-dehydroquinate synthase [Ajellomyces dermatitidis ATCC 18188]
Length = 1597
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 134/524 (25%), Positives = 231/524 (44%), Gaps = 83/524 (15%)
Query: 34 GADLVELCIDSMEF----SHISEVDKLIQH-------PTLPAIVSYRLKSSRKSSDEACK 82
G+D VEL +D ++ S I VD + + ++P + + R K+ +
Sbjct: 1076 GSDAVELRVDLLKDPQSDSEIPSVDYVAEQISVLRSRTSVPLVFTIRTKAQGGRFPDDAY 1135
Query: 83 NTCLQVLRRALDLDVEFVEMDYEVASDPLMSEIIYSRSNTKIIVS--------SYLNGGG 134
+ LQ+ R A+ + EFV+++ + L+ + + +KII S S+ NG
Sbjct: 1136 DAALQLYRLAIRMGSEFVDLEISFP-EQLLRTVTEMKGFSKIIASHHDPKGELSWANGSW 1194
Query: 135 KPTTEKLGDVIACMQATGADVMKLEIAVDSITDLAPVFEMLTHCQ----VPLIALAVGSR 190
K +Q DV+KL S+ D A + + T + VP+IA+ +G +
Sbjct: 1195 IQFYNK------ALQY--GDVIKLVGVARSLDDNASLKKFKTWAEEKHDVPIIAINMGDK 1246
Query: 191 GLISQLLGPKFGGFLV---YGSLGGKSVPGLPTLVSLKQVYQLEHINPDTKIFGLVSNPV 247
G +S++L GF+ + SL K+ PG + +++ L +K F ++ NPV
Sbjct: 1247 GQLSRMLN----GFMTPVSHPSLPFKAAPGQLSAREIRKGLSLIG-EIKSKKFAVIGNPV 1301
Query: 248 GHSKGPILHNPAFRHTRFNGIYVPMLVDD---VKEFFRTYSGTDFAGFSVGIPHKEPAVA 304
S+ P +HN FR Y + +D VK+F R+ DF G S+ IP K +
Sbjct: 1302 SASRSPAMHNALFRQMGLPHTYGTLETEDPEIVKKFIRS---PDFGGASITIPLKLDIMP 1358
Query: 305 CCDEVHPLAKSIGAVNTIIRRP-------IDGKLVGYNTDCESAISAIEDALRERQGING 357
DE+ P A SIGAVNTI+ P +L+G NTD + + + DA G
Sbjct: 1359 LLDEIAPEAVSIGAVNTIVCAPPAPDDQSQAPRLIGRNTDWQGMVRCLSDA-----GAYP 1413
Query: 358 VASHTSPIAGKIFVLVGAGGAGRALAFGAKSRG-ARVIIFNRNYER-------------A 403
A+ T+ AG +++G GG RA F +S G + + + R+ ++
Sbjct: 1414 AATPTTTSAG---LVIGGGGTARAAIFALQSMGYSPIYVVGRSPDKLSSMMSTFAPDHDI 1470
Query: 404 KALADAVSGEALHFEYLHEFFPEKGM------ILANASAIGMEPNSDQSPVPKEALKAYE 457
+ L D + E+L + +K + +L + + NSD +
Sbjct: 1471 RILEDVKALESLPTVAIGTIPGDKPIEPHMREVLCELFDLCEKANSDAEQA--RGISTKR 1528
Query: 458 LVFDAVYTPRNTRLLREAAEVGATVVSGVEMFIRQALGQFRLFT 501
++ + Y P T L++ A++ G TV+ G+E + Q + Q +T
Sbjct: 1529 ILLEMAYKPSVTSLMQLASDSGWTVLPGLEALVAQGVYQCEYWT 1572
>gi|169344492|ref|ZP_02865461.1| shikimate 5-dehydrogenase [Clostridium perfringens C str. JGS1495]
gi|169297412|gb|EDS79521.1| shikimate 5-dehydrogenase [Clostridium perfringens C str. JGS1495]
Length = 271
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 80/268 (29%), Positives = 130/268 (48%), Gaps = 20/268 (7%)
Query: 238 KIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLV--DDVKEFFRTYSGTDFAGFSVG 295
K+FGL+ +GHS P +HN F+ +G+Y V D + G +V
Sbjct: 2 KLFGLIGEKLGHSLSPDIHNKVFKDNNIDGLYNLFSVKKDFENNIVESLKCLGVKGANVT 61
Query: 296 IPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALRERQGI 355
IP+KE + D + AK+IGAVNTI+ + DGK GYNTD + ER +
Sbjct: 62 IPYKEKVMNQLDIISHEAKAIGAVNTILIK--DGKSYGYNTDYYGF-----GKMLERAKV 114
Query: 356 NGVASHTSPIAGKIFVLVGAGGAGRA-LAFGAKSRGARVIIFNRNYERAKALADAVSGEA 414
N I G F ++GAGGA R+ L + S+ ++++ +R+ E+A +
Sbjct: 115 N--------IEGNSFFVLGAGGAARSILKYLEDSKAKKIVLVSRDKEKAFKKFKDFNINF 166
Query: 415 LHFEYLHEFFPEKGMILANASAIGMEPNSDQSPVPKEALKAYELVFDAVYTPRNTRLLRE 474
+ + L E E +I N + GM PN++ V ++ +K +++ D VY P T+ L+
Sbjct: 167 MSYGELEEIHEEFALI--NTTPCGMYPNTNSVAVSEKVIKKFKVAVDIVYNPLETKFLKM 224
Query: 475 AAEVGATVVSGVEMFIRQALGQFRLFTG 502
A + G V G+ M + Q + ++ G
Sbjct: 225 AKDNGLKTVDGLFMLVGQGVKAEEIWNG 252
>gi|357031021|ref|ZP_09092965.1| shikimate 5-dehydrogenase [Gluconobacter morbifer G707]
gi|356415715|gb|EHH69358.1| shikimate 5-dehydrogenase [Gluconobacter morbifer G707]
Length = 276
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 101/277 (36%), Positives = 138/277 (49%), Gaps = 27/277 (9%)
Query: 233 INPDTKIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLVDD--VKEFFRTYSGTDFA 290
I+ T + G++ PV HS+ P+LHN R NG YVP+ E + + F
Sbjct: 2 IDGHTSLAGVMGWPVEHSRSPLLHNHWCRVAGVNGAYVPLPTRPGVFDEALKGLAAAGFR 61
Query: 291 GFSVGIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALR 350
G +V IPHKE A+ CDE+ +AK G VNTI R DG++VG DC ++
Sbjct: 62 GVNVTIPHKEAAMRACDELTDVAKRAGTVNTI--RFTDGRIVG---DCTDGTGFCDN--- 113
Query: 351 ERQGINGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGARVIIFNRNYERAKALADAV 410
+ +H I G+ VL AGGA RA+A RG V++ NR ERA+ L +A+
Sbjct: 114 -------LTAHGVAIEGRALVLG-AGGAARAVAAALLDRGCEVVVANRTLERAENLVEAL 165
Query: 411 -SGEAL-HFEYLHEFFPEKGMILANASAIGMEPNSDQSPVPKEALKAYE---LVFDAVYT 465
GEAL FE+ +L NA+++GM +D + AL+ V D VYT
Sbjct: 166 EGGEALPWFEW--PSLLSGCSLLVNATSLGMNGRTDMD--WEAALRQASPALCVTDIVYT 221
Query: 466 PRNTRLLREAAEVGATVVSGVEMFIRQALGQFRLFTG 502
PR T LL+ A G V G+ M I QA FR + G
Sbjct: 222 PRETPLLKAAQARGLKTVDGLGMLIHQARAGFRAWFG 258
>gi|261200843|ref|XP_002626822.1| 3-dehydroquinate synthase [Ajellomyces dermatitidis SLH14081]
gi|327507650|sp|C5JKE6.1|ARO1_AJEDS RecName: Full=Pentafunctional AROM polypeptide; Includes: RecName:
Full=3-dehydroquinate synthase; Short=DHQS; Includes:
RecName: Full=3-phosphoshikimate
1-carboxyvinyltransferase; AltName:
Full=5-enolpyruvylshikimate-3-phosphate synthase;
Short=EPSP synthase; Short=EPSPS; Includes: RecName:
Full=Shikimate kinase; Short=SK; Includes: RecName:
Full=3-dehydroquinate dehydratase;
Short=3-dehydroquinase; Includes: RecName: Full=Shikimate
dehydrogenase
gi|239593894|gb|EEQ76475.1| 3-dehydroquinate synthase [Ajellomyces dermatitidis SLH14081]
Length = 1597
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 134/524 (25%), Positives = 231/524 (44%), Gaps = 83/524 (15%)
Query: 34 GADLVELCIDSMEF----SHISEVDKLIQH-------PTLPAIVSYRLKSSRKSSDEACK 82
G+D VEL +D ++ S I VD + + ++P + + R K+ +
Sbjct: 1076 GSDAVELRVDLLKDPQSDSEIPSVDYVAEQISVLRSRTSVPLVFTIRTKAQGGRFPDDAY 1135
Query: 83 NTCLQVLRRALDLDVEFVEMDYEVASDPLMSEIIYSRSNTKIIVS--------SYLNGGG 134
+ LQ+ R A+ + EFV+++ + L+ + + +KII S S+ NG
Sbjct: 1136 DAALQLYRLAIRMGSEFVDLEISFP-EQLLRTVTEMKGFSKIIASHHDPKGELSWANGSW 1194
Query: 135 KPTTEKLGDVIACMQATGADVMKLEIAVDSITDLAPVFEMLTHCQ----VPLIALAVGSR 190
K +Q DV+KL S+ D A + + T + VP+IA+ +G +
Sbjct: 1195 IQFYNK------ALQY--GDVIKLVGVARSLDDNASLKKFKTWAEEKHDVPIIAINMGDK 1246
Query: 191 GLISQLLGPKFGGFLV---YGSLGGKSVPGLPTLVSLKQVYQLEHINPDTKIFGLVSNPV 247
G +S++L GF+ + SL K+ PG + +++ L +K F ++ NPV
Sbjct: 1247 GQLSRMLN----GFMTPVSHPSLPFKAAPGQLSAREIRKGLSLIG-EIKSKKFAVIGNPV 1301
Query: 248 GHSKGPILHNPAFRHTRFNGIYVPMLVDD---VKEFFRTYSGTDFAGFSVGIPHKEPAVA 304
S+ P +HN FR Y + +D VK+F R+ DF G S+ IP K +
Sbjct: 1302 SASRSPAMHNALFRQMGLPHTYGTLETEDPEIVKKFIRS---PDFGGASITIPLKLDIMP 1358
Query: 305 CCDEVHPLAKSIGAVNTIIRRP-------IDGKLVGYNTDCESAISAIEDALRERQGING 357
DE+ P A SIGAVNTI+ P +L+G NTD + + + DA G
Sbjct: 1359 LLDEIAPEAVSIGAVNTIVCAPPAPDDQSQAPRLIGRNTDWQGMVRCLSDA-----GAYP 1413
Query: 358 VASHTSPIAGKIFVLVGAGGAGRALAFGAKSRG-ARVIIFNRNYER-------------A 403
A+ T+ AG +++G GG RA F +S G + + + R+ ++
Sbjct: 1414 AATPTTTSAG---LVIGGGGTARAAIFALQSMGYSPIYVVGRSPDKLSSMTSTFAPDHDI 1470
Query: 404 KALADAVSGEALHFEYLHEFFPEKGM------ILANASAIGMEPNSDQSPVPKEALKAYE 457
+ L D + E+L + +K + +L + + NSD +
Sbjct: 1471 RILEDVKALESLPTVAIGTIPGDKPIEPHMREVLCELFDLCEKANSDAEQA--RGISTKR 1528
Query: 458 LVFDAVYTPRNTRLLREAAEVGATVVSGVEMFIRQALGQFRLFT 501
++ + Y P T L++ A++ G TV+ G+E + Q + Q +T
Sbjct: 1529 ILLEMAYKPSVTSLMQLASDSGWTVLPGLEALVAQGVYQCEYWT 1572
>gi|317050445|ref|YP_004111561.1| shikimate 5-dehydrogenase [Desulfurispirillum indicum S5]
gi|316945529|gb|ADU65005.1| shikimate 5-dehydrogenase [Desulfurispirillum indicum S5]
Length = 283
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 88/292 (30%), Positives = 135/292 (46%), Gaps = 31/292 (10%)
Query: 234 NPDTKIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLVDD---VKEFFRTYSGTDFA 290
+P ++FG+V +S P+LHN FRH+ + G YV + D ++ G
Sbjct: 5 SPQMQVFGIVGKDTSYSLSPVLHNAMFRHSGYGGTYVALPARDEATLRGLLAACRGGAVR 64
Query: 291 GFSVGIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTD----CESAISAIE 346
G ++ +P KE A A D + P A+S GAVNT++ R + L GYNTD C S
Sbjct: 65 GLNITVPWKESAAALVDFLDPTARSCGAVNTVVCR--ENGLWGYNTDGNGFCRS------ 116
Query: 347 DALRERQGINGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGAR-VIIFNRNYERAKA 405
L E G+ + G V++GAGGA R + V+++NR+ E+A+
Sbjct: 117 --LVEESGM--------ILEGARVVILGAGGAARGIVHALLQNAVHSVLVYNRSPEKARR 166
Query: 406 LA-DAVSGEALHFEYLHEFFPEKGMILANASAIGMEPNSDQSPVPKEALKAYELVFDAVY 464
LA DA + E +G I+ N ++ GM+ + Q + LK +D VY
Sbjct: 167 LAHDAADAR---VSAVSELPSMEGSIVVNTTSAGMKDDRTQ-LFSAQQLKGAAYFYDIVY 222
Query: 465 TPRNTRLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRKLVLE 516
P T + + + +G M + QAL F LFTG P +R+ + E
Sbjct: 223 APARTIHMEISWKANVPCCNGKGMLLWQALIAFELFTGFKCPVSAVRRALDE 274
>gi|210622509|ref|ZP_03293214.1| hypothetical protein CLOHIR_01162 [Clostridium hiranonis DSM 13275]
gi|210154222|gb|EEA85228.1| hypothetical protein CLOHIR_01162 [Clostridium hiranonis DSM 13275]
Length = 294
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 88/279 (31%), Positives = 145/279 (51%), Gaps = 28/279 (10%)
Query: 234 NPDTKIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLVDDVKEFFRTYSGT---DFA 290
N +T+IF L+ +PV +S P +H+ F NG Y+ ++ ++ ++T +
Sbjct: 14 NSETRIFALLGHPVSNSFSPNMHSYLFEKYGVNGAYLCFDIEP-RKIYKTVESMRILNAV 72
Query: 291 GFSVGIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALR 350
GF+V IP+K +A DE+ A+ IGAVNT+ + DG L GYNTD + AI D
Sbjct: 73 GFNVTIPYKTDIMAGLDEIDRNAELIGAVNTV--KNEDGVLKGYNTDGRGFVKAIID--- 127
Query: 351 ERQGINGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRG-ARVIIFNRNYERAKALA-- 407
I GK +++G+GGA R++A S G ++ I NR+ E A+ +A
Sbjct: 128 ----------RNISIIGKSALILGSGGACRSIAIEMASNGIGKIDIRNRSLENAEKIAKR 177
Query: 408 -DAVSGEALHF--EYLHEFFPEKGMILANASAIGMEPNSDQSPVPKE-ALKAYELVFDAV 463
++V G + + E + + EK L N + IGME S + P+ + + + +V+D V
Sbjct: 178 VNSVFGTEVVYSKEVVTKNDLEKYDFLINTTPIGME--SKECPIDEGIEVDSDIVVYDIV 235
Query: 464 YTPRNTRLLREAAEVGATVVSGVEMFIRQALGQFRLFTG 502
Y P T L++ A + V+ G++M I Q + F ++TG
Sbjct: 236 YKPHRTNLIKWAEKNNLKVIHGIDMLINQGIDAFEIWTG 274
>gi|313895569|ref|ZP_07829125.1| shikimate dehydrogenase [Selenomonas sp. oral taxon 137 str. F0430]
gi|312975695|gb|EFR41154.1| shikimate dehydrogenase [Selenomonas sp. oral taxon 137 str. F0430]
Length = 286
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 92/294 (31%), Positives = 140/294 (47%), Gaps = 24/294 (8%)
Query: 233 INPDTKIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYV--PMLVDDVKEFFRTYSGTDFA 290
I TK+ G++ P+ HS P+L N A R + +YV P+ D ++ F
Sbjct: 2 ITGRTKLLGVLGAPIEHSLSPVLQNAALRAAGLDYVYVALPVKRDALRSAVLGLRDAGFC 61
Query: 291 GFSVGIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALR 350
GF+V IP K +A D + A+ IGAVNT++ DG+L G+NTD ++
Sbjct: 62 GFNVTIPFKTEIIAVLDALDEDARRIGAVNTVVV-GADGRLTGHNTDAAGFLA------- 113
Query: 351 ERQGINGVASHTSPIAGKIFVLVGAGGAGRALAFGA-KSRGARVIIFNRNYERAKAL-AD 408
G + + G V++GAGGA RA+ G ++ A+V I RN + + L AD
Sbjct: 114 ------GFTACGVSLRGAYVVVLGAGGAARAVLCGLLRAGAAQVSIGVRNLVKGEKLCAD 167
Query: 409 -AVSGEALHFEYLHEFFPEK---GMILANASAIGMEPNSDQ-SPVPKEALKAYELVFDAV 463
A G+ F + F + +L + +GM P+ ++ PV + V+D +
Sbjct: 168 FAADGDVRAFRFDDAAFRARLGSADVLVQTTPLGMSPHPEEMPPVDWAVVHPAAFVYDLI 227
Query: 464 YTPRNTRLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRKLVLEQ 517
YTP TR LREAA G V+G M Q F L+T G+ P+ + VL +
Sbjct: 228 YTPAETRFLREAARRGHRCVNGETMLAAQGAEAFFLWT-GVRPDLLCMRRVLRE 280
>gi|306824984|ref|ZP_07458327.1| shikimate dehydrogenase [Streptococcus sp. oral taxon 071 str.
73H25AP]
gi|304432811|gb|EFM35784.1| shikimate dehydrogenase [Streptococcus sp. oral taxon 071 str.
73H25AP]
Length = 284
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 91/297 (30%), Positives = 148/297 (49%), Gaps = 35/297 (11%)
Query: 237 TKIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLVD--DVKEFFRTYSGTDFAGFSV 294
T++ +V+NP+ HS P +HN AF T NG+YV ++ D+ E G ++
Sbjct: 7 TRLAAVVANPIKHSISPFIHNRAFEATATNGVYVAWEIEAGDLAETVANIRRYQMFGINL 66
Query: 295 GIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALRERQG 354
+P+KE + DE+ A+ IGAVNT++ + DG L+GYNTD + ++
Sbjct: 67 SMPYKEQVIPYLDELSDEARLIGAVNTVVNQ--DGTLIGYNTDGKGFFKSL--------- 115
Query: 355 INGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRG-ARVIIFNR--NYERAKALADAVS 411
S T I+ K ++GAGGA +++ A G +++ +F R + E+ + +
Sbjct: 116 ----PSFT--ISDKKMTILGAGGAAKSILAQAILDGVSQISVFVRSVSMEKTRPYLTKLQ 169
Query: 412 GEALHFE---YLHEFFPE------KGMILANASAIGMEPNSDQSPVPKE-ALKAYELVFD 461
E F+ Y E E K +L NA+++GM+ S SPVP+ L LV D
Sbjct: 170 -EQTDFKVGLYALEDISELQEKIAKSDLLVNATSVGMDGQS--SPVPESINLPETLLVAD 226
Query: 462 AVYTPRNTRLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRKLVLEQF 518
+Y P T L+ A G V+G+ M + QA F+L+TG P D + + + E++
Sbjct: 227 IIYQPFETPFLKWARSQGNPAVNGLGMLLYQAAEAFQLWTGKEMPTDEIWQSLTEKY 283
>gi|239637593|ref|ZP_04678565.1| shikimate 5-dehydrogenase [Staphylococcus warneri L37603]
gi|239596811|gb|EEQ79336.1| shikimate 5-dehydrogenase [Staphylococcus warneri L37603]
Length = 271
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 83/284 (29%), Positives = 137/284 (48%), Gaps = 26/284 (9%)
Query: 240 FGLVSNPVGHSKGPILHNPAFRHTRFNGIY--VPMLVDDVKEFFRTYSGTDFAGFSVGIP 297
F ++ +P+ HS P++HN F Y V + ++D G GF++ IP
Sbjct: 5 FAVIGDPISHSLSPLMHNKNFESLDLKYTYEAVNISIEDFDHIKEIIEGKSLDGFNITIP 64
Query: 298 HKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALRERQGING 357
HKE + DE+ + S+GAVNT++ R DGK +GYNTD ++ + RQ N
Sbjct: 65 HKERIIPYLDEIDHQSSSVGAVNTVLIR--DGKWIGYNTDGIGYVTGL------RQVYND 116
Query: 358 VASHTSPIAGKIFVLVGAGGAGRALAFG-AKSRGARVIIFNRNYERAKALADAVSGEALH 416
+ + +++GAGGA + +A K ++ + NR +R ++ V+ +L
Sbjct: 117 LEN-------AYILILGAGGASKGIANELNKFVQPKLTVANRTMKRFESWDLDVNQISLD 169
Query: 417 F--EYLHEFFPEKGMILANASAIGMEPNSDQSPVPKEALKAYELVFDAVYTPRNTRLLRE 474
+L EF I+ N + GM+ N D P+ + L LV D VY P T +L
Sbjct: 170 QAESHLDEF-----DIIINTTPAGMDNNQD-IPIDLKYLNPETLVSDIVYIPYKTPILIA 223
Query: 475 AAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRKLVLEQF 518
A + G + +G++MF+ Q F+++TG A M+ VL +
Sbjct: 224 AEKKGNPIYNGLDMFVYQGAESFKIWTGLQADIKTMKNSVLNEL 267
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.320 0.136 0.391
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,906,544,490
Number of Sequences: 23463169
Number of extensions: 341622911
Number of successful extensions: 1039885
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 3494
Number of HSP's successfully gapped in prelim test: 4088
Number of HSP's that attempted gapping in prelim test: 1019379
Number of HSP's gapped (non-prelim): 7992
length of query: 518
length of database: 8,064,228,071
effective HSP length: 147
effective length of query: 371
effective length of database: 8,910,109,524
effective search space: 3305650633404
effective search space used: 3305650633404
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 79 (35.0 bits)