BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 010101
(518 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9SQT8|DHQSD_ARATH Bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase,
chloroplastic OS=Arabidopsis thaliana GN=EMB3004 PE=1
SV=1
Length = 603
Score = 435 bits (1119), Expect = e-121, Method: Compositional matrix adjust.
Identities = 242/512 (47%), Positives = 342/512 (66%), Gaps = 5/512 (0%)
Query: 6 KNSLLVCTQLECETTEEMQASIEQAKVEGADLVELCIDSM-EFSHISEVDKLIQHPTLPA 64
KN L+C + ++ ++M +A GADLVE+ +D + +F+ + ++ +I+ LP
Sbjct: 91 KNPSLICAPVMADSIDKMVIETSKAHELGADLVEIRLDWLKDFNPLEDLKTIIKKSPLPT 150
Query: 65 IVSYRLKSSRKSSDEACKNTCLQVLRRALDLDVEFVEMDYEVASDPLMSEIIYSRSNTKI 124
+ +YR K E +N VLR A++L ++++++ +VAS+ + S K+
Sbjct: 151 LFTYRPKW-EGGQYEGDENERRDVLRLAMELGADYIDVELQVASEFIKSIDGKKPGKFKV 209
Query: 125 IVSSYLNGGGKPTTEKLGDVIACMQATGADVMKLEIAVDSITDLAPVFEMLTHCQVPLIA 184
IVSS+ N P+ E L ++A +Q TGAD++K+ I D+A +F + + QVP I
Sbjct: 210 IVSSH-NYQNTPSVEDLDGLVARIQQTGADIVKIATTAVDIADVARMFHITSKAQVPTIG 268
Query: 185 LAVGSRGLISQLLGPKFGGFLVYGSLGGKSV--PGLPTLVSLKQVYQLEHINPDTKIFGL 242
L +G RGL+S++L KFGG+L +G+L V PG PT+ L +Y I PDTK++G+
Sbjct: 269 LVMGERGLMSRILCSKFGGYLTFGTLDSSKVSAPGQPTIKDLLDLYNFRRIGPDTKVYGI 328
Query: 243 VSNPVGHSKGPILHNPAFRHTRFNGIYVPMLVDDVKEFFRTYSGTDFAGFSVGIPHKEPA 302
+ PV HSK PI+HN AF+ FNG+YV +LVD++ F + YS +DFAGFS IPHKE A
Sbjct: 329 IGKPVSHSKSPIVHNQAFKSVDFNGVYVHLLVDNLVSFLQAYSSSDFAGFSCTIPHKEAA 388
Query: 303 VACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALRERQGINGVASHT 362
+ CCDEV PLAKSIGAVNTI+RR DGKL+GYNTDC +ISAIED LR + V S +
Sbjct: 389 LQCCDEVDPLAKSIGAVNTILRRKSDGKLLGYNTDCIGSISAIEDGLRSSGDPSSVPSSS 448
Query: 363 SPIAGKIFVLVGAGGAGRALAFGAKSRGARVIIFNRNYERAKALADAVSGEALHFEYLHE 422
SP+A K V++GAGGAG+ALA+GAK +GA+V+I NR YERA LA+A+ G+AL L
Sbjct: 449 SPLASKTVVVIGAGGAGKALAYGAKEKGAKVVIANRTYERALELAEAIGGKALSLTDLDN 508
Query: 423 FFPEKGMILANASAIGMEPNSDQSPVPKEALKAYELVFDAVYTPRNTRLLREAAEVGATV 482
+ PE GM+LAN +++GM+PN +++P+ K+ALK Y LVFDAVYTPR TRLLREA E GA
Sbjct: 509 YHPEDGMVLANTTSMGMQPNVEETPISKDALKHYALVFDAVYTPRITRLLREAEESGAIT 568
Query: 483 VSGVEMFIRQALGQFRLFTGGLAPEDFMRKLV 514
VSG EMF+RQA QF +FTG AP++ +++
Sbjct: 569 VSGSEMFVRQAYEQFEIFTGLPAPKELYWQIM 600
>sp|A9VHW1|AROE_BACWK Shikimate dehydrogenase OS=Bacillus weihenstephanensis (strain
KBAB4) GN=aroE PE=3 SV=1
Length = 277
Score = 167 bits (424), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 98/288 (34%), Positives = 158/288 (54%), Gaps = 22/288 (7%)
Query: 238 KIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLVDD--VKEFFRTYSGTDFAGFSVG 295
+++G++ NP+GHS P++HN AF H + Y+ LV++ + E + +GF+V
Sbjct: 3 QLYGVIGNPIGHSLSPVMHNDAFEHLNMDAHYLAFLVEEEALGEAVKGLKALGISGFNVT 62
Query: 296 IPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALRERQGI 355
PHK + DE+ PLA+ IGAVNT++ R DGKL+GYNTD + A++ +
Sbjct: 63 TPHKVAIMEYLDEIAPLARQIGAVNTVVHR--DGKLIGYNTDGIGFVRALQSISED---- 116
Query: 356 NGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGARVI-IFNRNYERAKAL----ADAV 410
P+ K +L+GAGGA RA+ F G + I I NR ++AK L + V
Sbjct: 117 --------PLQEKRILLIGAGGASRAIYFSLADVGVKEIDIANRTRDKAKNLISGCMENV 168
Query: 411 SGEALHFEYLHEFFPEKGMILANASAIGMEPNSDQSPVPKEALKAYELVFDAVYTPRNTR 470
+ AL E E E +I+ + IGM P+ + +P+ +LK +V D +Y P T+
Sbjct: 169 NSHALSLECAAENQGEYDIII-QTTTIGMHPHVEYTPLEIRSLKQGTIVSDIIYNPFETK 227
Query: 471 LLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRKLVLEQF 518
+L +A E GA + +G++MF+ Q F ++TG + D M++LV+ +
Sbjct: 228 ILGDAKEQGAIIQNGIDMFVYQGALAFEMWTGCVPNIDRMKQLVMREL 275
>sp|Q818D0|AROE_BACCR Shikimate dehydrogenase OS=Bacillus cereus (strain ATCC 14579 / DSM
31) GN=aroE PE=3 SV=1
Length = 277
Score = 167 bits (422), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 100/290 (34%), Positives = 159/290 (54%), Gaps = 26/290 (8%)
Query: 238 KIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLVDD--VKEFFRTYSGTDFAGFSVG 295
+++G++ NP+GHS P++HN AF H + Y LV++ + E R +GF+V
Sbjct: 3 QLYGVIGNPIGHSLSPVMHNDAFEHLNMDAHYHAFLVEEELLGEAVRGLKALGISGFNVT 62
Query: 296 IPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALRERQGI 355
PHK + DE+ PLA+ IGAVNT++ + DG+L+GYNTD + A++ E
Sbjct: 63 TPHKVAIMEYLDEIDPLARKIGAVNTVVHK--DGRLIGYNTDGIGFVRALQSISNE---- 116
Query: 356 NGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGARVI-IFNRNYERAKALADA----V 410
P+ GK +L+G+GGA RA+ F G + I + NR ++AK L A V
Sbjct: 117 --------PLQGKRILLLGSGGASRAIYFSLADVGVKEIDVANRTVDKAKELIAARTADV 168
Query: 411 SGEALHFEYLHEFFPEKGM--ILANASAIGMEPNSDQSPVPKEALKAYELVFDAVYTPRN 468
+ AL E E E+G I+ + IGM P+ + +P+ +LK +V D +Y P
Sbjct: 169 NSVALSLEKATE---EQGNYDIIIQTTTIGMHPHVEHTPLQICSLKKGTIVSDIIYNPFE 225
Query: 469 TRLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRKLVLEQF 518
T++L EA E GA + +G++MF+ Q F ++TG + M++LV+E+
Sbjct: 226 TKILCEAKEQGAIIQNGIDMFVYQGALAFEMWTGRTPNIERMKQLVIEKL 275
>sp|B7HCW1|AROE_BACC4 Shikimate dehydrogenase OS=Bacillus cereus (strain B4264) GN=aroE
PE=3 SV=1
Length = 277
Score = 167 bits (422), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 100/290 (34%), Positives = 159/290 (54%), Gaps = 26/290 (8%)
Query: 238 KIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLVDD--VKEFFRTYSGTDFAGFSVG 295
+++G++ NP+GHS P++HN AF H + Y LV++ + E R +GF+V
Sbjct: 3 QLYGVIGNPIGHSLSPVMHNDAFEHLNMDAHYHAFLVEEELLGEAVRGLKALGISGFNVT 62
Query: 296 IPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALRERQGI 355
PHK + DE+ PLA+ IGAVNT++ + DG+L+GYNTD + A++ E
Sbjct: 63 TPHKVAIMEYLDEIDPLARKIGAVNTVVHK--DGRLIGYNTDGIGFVRALQSISNE---- 116
Query: 356 NGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGARVI-IFNRNYERAKALADA----V 410
P+ GK +L+G+GGA RA+ F G + I + NR ++AK L A V
Sbjct: 117 --------PLQGKRILLLGSGGASRAIYFSLADVGVKEIDVANRTVDKAKELIAARTADV 168
Query: 411 SGEALHFEYLHEFFPEKGM--ILANASAIGMEPNSDQSPVPKEALKAYELVFDAVYTPRN 468
+ AL E E E+G I+ + IGM P+ + +P+ +LK +V D +Y P
Sbjct: 169 NSVALSLEKATE---EQGNYDIIIQTTTIGMHPHVEHTPLQICSLKKGTIVSDIIYNPFE 225
Query: 469 TRLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRKLVLEQF 518
T++L EA E GA + +G++MF+ Q F ++TG + M++LV+E+
Sbjct: 226 TKILCEAKEQGAIIQNGIDMFVYQGALAFEMWTGRTPNIERMKQLVIEKL 275
>sp|B7IYI7|AROE_BACC2 Shikimate dehydrogenase OS=Bacillus cereus (strain G9842) GN=aroE
PE=3 SV=1
Length = 277
Score = 166 bits (420), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 100/290 (34%), Positives = 159/290 (54%), Gaps = 26/290 (8%)
Query: 238 KIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLVDD--VKEFFRTYSGTDFAGFSVG 295
+++G++ NP+GHS P++HN AF H + Y LV++ + E R +GF+V
Sbjct: 3 QLYGVIGNPIGHSLSPVMHNNAFEHLNMDAHYHAFLVEEEVLGEAVRGLKALGISGFNVT 62
Query: 296 IPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALRERQGI 355
PHK + DE+ PLA+ IGAVNT++ + +G+L+GYNTD + A++ E
Sbjct: 63 TPHKVAIMEYLDEIDPLARKIGAVNTVVHK--NGRLIGYNTDGIGFVRALQSISHE---- 116
Query: 356 NGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGARVI-IFNRNYERAKALADA----V 410
P+ GK +L+GAGGA RA+ F G + I + NR ++AK L A V
Sbjct: 117 --------PLQGKRILLLGAGGASRAIYFSLADVGVKEIDVANRTVDKAKELIAARTADV 168
Query: 411 SGEALHFEYLHEFFPEKGM--ILANASAIGMEPNSDQSPVPKEALKAYELVFDAVYTPRN 468
+ AL E E E+G I+ + IGM P+ + +P+ +LK +V D +Y P
Sbjct: 169 NSVALSLEKATE---EQGNYDIIIQTTTIGMHPHVEHTPLQICSLKKGTIVSDIIYNPFE 225
Query: 469 TRLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRKLVLEQF 518
T++L EA E GA + +G++MF+ Q F ++TG + M++LV+E+
Sbjct: 226 TKILCEAKEQGAIIQNGIDMFVYQGALAFEMWTGSVPNIGRMKQLVIEKL 275
>sp|C3L5T8|AROE_BACAC Shikimate dehydrogenase OS=Bacillus anthracis (strain CDC 684 /
NRRL 3495) GN=aroE PE=3 SV=1
Length = 277
Score = 165 bits (417), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 100/290 (34%), Positives = 156/290 (53%), Gaps = 26/290 (8%)
Query: 238 KIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLVDD--VKEFFRTYSGTDFAGFSVG 295
+++G++ NP+GHS P++HN AF H + + Y LV + + E R +GF+V
Sbjct: 3 RLYGVIGNPIGHSLSPVMHNDAFEHLKMDAHYHAFLVKEEVLGEAVRGLKALGISGFNVT 62
Query: 296 IPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALRERQGI 355
PHK + DE+ PLAK IGAVNT++ + DGKL+GYNTD + A++ E
Sbjct: 63 TPHKVAIMDYLDEIDPLAKQIGAVNTVVHK--DGKLIGYNTDGIGFVRALQSISSE---- 116
Query: 356 NGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGARVI-IFNRNYERAKALADA----V 410
P+ K +L+GAGGA RA+ F G + I + NR ++AK L A V
Sbjct: 117 --------PLQEKRILLLGAGGASRAIYFSLADAGVKEIDVANRTVDKAKELIAACTATV 168
Query: 411 SGEALHFEYLHEFFPEKGM--ILANASAIGMEPNSDQSPVPKEALKAYELVFDAVYTPRN 468
AL E + E+G I+ + IGM P + +P+ +LK +V D +Y P
Sbjct: 169 HSVALSLE---KATKEQGNYDIIIQTTTIGMHPRVEHTPLQISSLKKGTIVSDIIYNPFE 225
Query: 469 TRLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRKLVLEQF 518
T++L EA E GA + +G++MF+ Q F ++TG + + M++LV+ +
Sbjct: 226 TKILCEAKEQGAIIQNGIDMFVYQGALAFEMWTGCVPNIERMKQLVIRKL 275
>sp|B9IYA1|AROE_BACCQ Shikimate dehydrogenase OS=Bacillus cereus (strain Q1) GN=aroE PE=3
SV=1
Length = 277
Score = 164 bits (416), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 100/288 (34%), Positives = 152/288 (52%), Gaps = 22/288 (7%)
Query: 238 KIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLVDD--VKEFFRTYSGTDFAGFSVG 295
+++G++ NP+GHS P++HN AF H + Y LV + + E R +GF+V
Sbjct: 3 QLYGVIGNPIGHSLSPVMHNDAFEHLNMDAHYHAFLVKEEVLGEAVRGLKALGISGFNVT 62
Query: 296 IPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALRERQGI 355
PHK + DE+ PLAK IGAVNT++ + DGKL+GYNTD + A++ E
Sbjct: 63 TPHKVAIMDYLDEIDPLAKQIGAVNTVVHK--DGKLIGYNTDGIGFVKALQSISSE---- 116
Query: 356 NGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGARVI-IFNRNYERAKALADA----V 410
P+ K +L+GAGGA RA+ F G + I + NR ++AK L A V
Sbjct: 117 --------PLQEKRILLLGAGGASRAIYFSLADVGVKEIDVANRTVDKAKELITACTATV 168
Query: 411 SGEALHFEYLHEFFPEKGMILANASAIGMEPNSDQSPVPKEALKAYELVFDAVYTPRNTR 470
AL E E E I+ + IGM P + +P+ +LK +V D +Y P T+
Sbjct: 169 HSVALSLEEATEE-QENYDIIIQTTTIGMHPRVEHTPLQISSLKKGTIVSDIIYNPFETK 227
Query: 471 LLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRKLVLEQF 518
+L EA E GA + +G++MF+ Q F ++TG + M++LV+ +
Sbjct: 228 ILCEAKEQGAMIQNGIDMFVYQGALAFEMWTGRTPNIERMKQLVIRKL 275
>sp|B7HPN3|AROE_BACC7 Shikimate dehydrogenase OS=Bacillus cereus (strain AH187) GN=aroE
PE=3 SV=1
Length = 277
Score = 164 bits (416), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 100/288 (34%), Positives = 152/288 (52%), Gaps = 22/288 (7%)
Query: 238 KIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLVDD--VKEFFRTYSGTDFAGFSVG 295
+++G++ NP+GHS P++HN AF H + Y LV + + E R +GF+V
Sbjct: 3 QLYGVIGNPIGHSLSPVMHNDAFEHLNMDAHYHAFLVKEEVLGEAVRGLKALGISGFNVT 62
Query: 296 IPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALRERQGI 355
PHK + DE+ PLAK IGAVNT++ + DGKL+GYNTD + A++ E
Sbjct: 63 TPHKVAIMDYLDEIDPLAKQIGAVNTVVHK--DGKLIGYNTDGIGFVKALQSISSE---- 116
Query: 356 NGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGARVI-IFNRNYERAKALADA----V 410
P+ K +L+GAGGA RA+ F G + I + NR ++AK L A V
Sbjct: 117 --------PLQEKRILLLGAGGASRAIYFSLADVGVKEIDVANRTVDKAKELITACTATV 168
Query: 411 SGEALHFEYLHEFFPEKGMILANASAIGMEPNSDQSPVPKEALKAYELVFDAVYTPRNTR 470
AL E E E I+ + IGM P + +P+ +LK +V D +Y P T+
Sbjct: 169 HSVALSLEEATEE-QENYDIIIQTTTIGMHPRVEHTPLQISSLKKGTIVSDIIYNPFETK 227
Query: 471 LLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRKLVLEQF 518
+L EA E GA + +G++MF+ Q F ++TG + M++LV+ +
Sbjct: 228 ILCEAKEQGAMIQNGIDMFVYQGALAFEMWTGRTPNIERMKQLVIRKL 275
>sp|Q6HDI8|AROE_BACHK Shikimate dehydrogenase OS=Bacillus thuringiensis subsp. konkukian
(strain 97-27) GN=aroE PE=3 SV=1
Length = 277
Score = 164 bits (414), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 100/290 (34%), Positives = 155/290 (53%), Gaps = 26/290 (8%)
Query: 238 KIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLVDD--VKEFFRTYSGTDFAGFSVG 295
+++G++ NP+GHS P++HN AF H + Y LV + + E R +GF+V
Sbjct: 3 QLYGVIGNPIGHSLSPVMHNDAFEHLNMDAHYHAFLVKEEVLGEAVRGLKALGISGFNVT 62
Query: 296 IPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALRERQGI 355
PHK + DE+ PLAK IGAVNT++ + DGKL+GYNTD + A++ E
Sbjct: 63 TPHKVAIMDYLDEIDPLAKQIGAVNTVVHK--DGKLIGYNTDGIGFVRALQSISSE---- 116
Query: 356 NGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGARVI-IFNRNYERAKALADA----V 410
P+ K +L+GAGGA RA+ F G + I + NR ++AK L A V
Sbjct: 117 --------PLQEKRILLLGAGGASRAIYFSLADAGVKEIDVANRTVDKAKELIAACTATV 168
Query: 411 SGEALHFEYLHEFFPEKGM--ILANASAIGMEPNSDQSPVPKEALKAYELVFDAVYTPRN 468
AL E + E+G I+ + IGM P + +P+ +LK +V D +Y P
Sbjct: 169 HSVALSLE---KATKEQGSYDIIIQTTTIGMHPRVEHTPLQISSLKKGTIVSDIIYNPFE 225
Query: 469 TRLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRKLVLEQF 518
T++L EA E GA + +G++MF+ Q F ++TG + + M++LV+ +
Sbjct: 226 TKILCEAKEQGAIIQNGIDMFVYQGALAFEMWTGCVPNIERMKQLVIRKL 275
>sp|Q634K8|AROE_BACCZ Shikimate dehydrogenase OS=Bacillus cereus (strain ZK / E33L)
GN=aroE PE=3 SV=1
Length = 277
Score = 164 bits (414), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 100/290 (34%), Positives = 155/290 (53%), Gaps = 26/290 (8%)
Query: 238 KIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLVDD--VKEFFRTYSGTDFAGFSVG 295
+++G++ NP+GHS P++HN AF H + Y LV + + E R +GF+V
Sbjct: 3 QLYGVIGNPIGHSLSPVMHNDAFEHLNMDAHYHAFLVKEEVLGEAVRGLKALGISGFNVT 62
Query: 296 IPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALRERQGI 355
PHK + DE+ PLAK IGAVNT++ + DGKL+GYNTD + A++ E
Sbjct: 63 TPHKVAIMDYLDEIDPLAKQIGAVNTVVHK--DGKLIGYNTDGIGFVRALQSISNE---- 116
Query: 356 NGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGARVI-IFNRNYERAKALADA----V 410
P+ K +L+GAGGA RA+ F G + I + NR ++AK L A V
Sbjct: 117 --------PLQEKRILLLGAGGASRAIYFSLADVGVKEIDVANRTVDKAKELIAACTATV 168
Query: 411 SGEALHFEYLHEFFPEKGM--ILANASAIGMEPNSDQSPVPKEALKAYELVFDAVYTPRN 468
AL E + E+G I+ + IGM P + +P+ +LK +V D +Y P
Sbjct: 169 HSVALSLE---KATKEQGNYDIIIQTTTIGMHPRVEHTPLQISSLKKGTIVSDIIYNPFE 225
Query: 469 TRLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRKLVLEQF 518
T++L EA E GA + +G++MF+ Q F ++TG + + M++LV+ +
Sbjct: 226 TKILCEAKEQGAIIQNGIDMFVYQGALAFEMWTGCVPNIERMKQLVIRKL 275
>sp|B7JNW6|AROE_BACC0 Shikimate dehydrogenase OS=Bacillus cereus (strain AH820) GN=aroE
PE=3 SV=1
Length = 277
Score = 164 bits (414), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 100/290 (34%), Positives = 155/290 (53%), Gaps = 26/290 (8%)
Query: 238 KIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLVDD--VKEFFRTYSGTDFAGFSVG 295
+++G++ NP+GHS P++HN AF H + Y LV + + E R +GF+V
Sbjct: 3 QLYGVIGNPIGHSLSPVMHNDAFEHLNMDAHYHAFLVKEEVLGEAVRGLKALGISGFNVT 62
Query: 296 IPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALRERQGI 355
PHK + DE+ PLAK IGAVNT++ + DGKL+GYNTD + A++ E
Sbjct: 63 TPHKVAIMDYLDEIDPLAKQIGAVNTVVHK--DGKLIGYNTDGIGFVRALQSISSE---- 116
Query: 356 NGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGARVI-IFNRNYERAKALADA----V 410
P+ K +L+GAGGA RA+ F G + I + NR ++AK L A V
Sbjct: 117 --------PLQEKRILLLGAGGASRAIYFSLADAGVKEIDVANRTVDKAKELIAACTATV 168
Query: 411 SGEALHFEYLHEFFPEKGM--ILANASAIGMEPNSDQSPVPKEALKAYELVFDAVYTPRN 468
AL E + E+G I+ + IGM P + +P+ +LK +V D +Y P
Sbjct: 169 HSVALSLE---KATKEQGNYDIIIQTTTIGMHPRVEHTPLQISSLKKGTIVSDIIYNPFE 225
Query: 469 TRLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRKLVLEQF 518
T++L EA E GA + +G++MF+ Q F ++TG + + M++LV+ +
Sbjct: 226 TKILCEAKEQGAIIQNGIDMFVYQGALAFEMWTGCVPNIERMKQLVIRKL 275
>sp|A0RIV1|AROE_BACAH Shikimate dehydrogenase OS=Bacillus thuringiensis (strain Al Hakam)
GN=aroE PE=3 SV=1
Length = 277
Score = 162 bits (410), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 99/290 (34%), Positives = 155/290 (53%), Gaps = 26/290 (8%)
Query: 238 KIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLVDD--VKEFFRTYSGTDFAGFSVG 295
+++G++ NP+GHS P++HN AF H + Y LV + + E R +GF+V
Sbjct: 3 QLYGVIGNPIGHSLSPVMHNDAFEHLNMDAHYHAFLVKEEVLGEAVRGLKALGISGFNVT 62
Query: 296 IPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALRERQGI 355
PHK + DE+ PLAK IGAVNT++ + +GKL+GYNTD + A++ E
Sbjct: 63 TPHKVAIMDYLDEIDPLAKQIGAVNTVVHK--NGKLIGYNTDGIGFVRALQSISSE---- 116
Query: 356 NGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGARVI-IFNRNYERAKALADA----V 410
P+ K +L+GAGGA RA+ F G + I + NR ++AK L A V
Sbjct: 117 --------PLQEKRILLLGAGGASRAIYFSLADAGVKEIDVANRTVDKAKELIAACTATV 168
Query: 411 SGEALHFEYLHEFFPEKGM--ILANASAIGMEPNSDQSPVPKEALKAYELVFDAVYTPRN 468
AL E + E+G I+ + IGM P + +P+ +LK +V D +Y P
Sbjct: 169 HSVALSLE---KATKEQGSYDIIIQTTTIGMHPRVEHTPLQISSLKKGTIVSDIIYNPFE 225
Query: 469 TRLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRKLVLEQF 518
T++L EA E GA + +G++MF+ Q F ++TG + + M++LV+ +
Sbjct: 226 TKILCEAKEQGAIIQNGIDMFVYQGALAFEMWTGCVPNIERMKQLVIRKL 275
>sp|Q730K1|AROE_BACC1 Shikimate dehydrogenase OS=Bacillus cereus (strain ATCC 10987)
GN=aroE PE=3 SV=1
Length = 277
Score = 162 bits (409), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 99/290 (34%), Positives = 154/290 (53%), Gaps = 26/290 (8%)
Query: 238 KIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLVDD--VKEFFRTYSGTDFAGFSVG 295
+++G++ NP+GHS P++HN AF H + Y LV + + E R +GF+V
Sbjct: 3 QLYGVIGNPIGHSLSPVMHNDAFEHLNMDAHYHAFLVKEEVLGEAVRGLKALGISGFNVT 62
Query: 296 IPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALRERQGI 355
PHK + DE+ PLAK IGAVNT++ + DGKL+GYNTD + A++
Sbjct: 63 TPHKVAIMDYLDEIDPLAKQIGAVNTVVHK--DGKLIGYNTDGIGFVRALQ--------- 111
Query: 356 NGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGARVI-IFNRNYERAKALADA----V 410
+ + P+ K +L+GAGGA RA+ F G + I + NR ++AK L A V
Sbjct: 112 ---SISSKPLQEKRILLLGAGGASRAIYFSLADVGVKEIDVANRTVDKAKELITACKATV 168
Query: 411 SGEALHFEYLHEFFPEKGM--ILANASAIGMEPNSDQSPVPKEALKAYELVFDAVYTPRN 468
AL E E E+G I+ + IGM P + +P+ +L +V D +Y P
Sbjct: 169 HSVALSLEKATE---EQGNYDIIIQTTTIGMHPRVEHTPLQISSLNKGTIVSDIIYNPFE 225
Query: 469 TRLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRKLVLEQF 518
T++L EA E GA + +G++MF+ Q F ++TG + M++LV+ +
Sbjct: 226 TKILCEAKEQGAMIQNGIDMFVYQGALAFEMWTGRTPNIERMKQLVIRKL 275
>sp|C1ESM8|AROE_BACC3 Shikimate dehydrogenase OS=Bacillus cereus (strain 03BB102) GN=aroE
PE=3 SV=1
Length = 277
Score = 161 bits (408), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 99/290 (34%), Positives = 154/290 (53%), Gaps = 26/290 (8%)
Query: 238 KIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLVDD--VKEFFRTYSGTDFAGFSVG 295
+++G++ NP+GHS P++HN AF H + Y LV + + E R +GF+V
Sbjct: 3 QLYGVIGNPIGHSLSPVMHNDAFEHLNMDAHYHAFLVKEEVLGEAVRGLKALGISGFNVT 62
Query: 296 IPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALRERQGI 355
PHK + DE+ PLAK IGAVNT++ + +GKL GYNTD + A++ E
Sbjct: 63 TPHKVAIMDYLDEIDPLAKQIGAVNTVVHK--NGKLTGYNTDGIGFVRALQSISSE---- 116
Query: 356 NGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGARVI-IFNRNYERAKALADA----V 410
P+ K +L+GAGGA RA+ F G + I + NR ++AK L A V
Sbjct: 117 --------PLQEKRILLLGAGGASRAIYFSLADAGVKEIDVANRTVDKAKELIAACTATV 168
Query: 411 SGEALHFEYLHEFFPEKGM--ILANASAIGMEPNSDQSPVPKEALKAYELVFDAVYTPRN 468
AL E + E+G I+ + IGM P + +P+ +LK +V D +Y P
Sbjct: 169 HSVALSLE---KATKEQGSYDIIIQTTTIGMHPRVEHTPLQISSLKKGTIVSDIIYNPFE 225
Query: 469 TRLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRKLVLEQF 518
T++L EA E GA + +G++MF+ Q F ++TG + + M++LV+ +
Sbjct: 226 TKILCEAKEQGAIIQNGIDMFVYQGALAFEMWTGCVPNIERMKQLVIRKL 275
>sp|C0ZB07|AROE_BREBN Shikimate dehydrogenase OS=Brevibacillus brevis (strain 47 / JCM
6285 / NBRC 100599) GN=aroE PE=3 SV=1
Length = 283
Score = 158 bits (399), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 112/293 (38%), Positives = 161/293 (54%), Gaps = 22/293 (7%)
Query: 233 INPDTKIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLVD--DVKEFFRTYSGTDFA 290
I T++ GL +PV HS+ P++HN AF T Y V+ ++++
Sbjct: 2 ITSKTQLVGLFGHPVSHSQSPMMHNTAFLETGLGFAYAAFDVEPENLEDAVAGIRALGLK 61
Query: 291 GFSVGIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALR 350
G +V IPHK + DE+ PLAK IGAVNT++ R DG+L+GYNTD + + L
Sbjct: 62 GINVTIPHKVAIMPMLDEIDPLAKRIGAVNTVVSR--DGRLIGYNTDGMGYVRS----LV 115
Query: 351 ERQGINGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGARVI-IFNRNYERAKALADA 409
E GI + ++ +VGAGGA RA+AF +G + I I NR+ ERA LA+
Sbjct: 116 EETGI--------VLEKQVVTMVGAGGAARAVAFTLAEQGVKEIRIINRSRERAAVLAEH 167
Query: 410 VSGEALHFEYLHEFFPEKGM----ILANASAIGMEPNSDQSPVPKEALKAYELVFDAVYT 465
V G + + + + E + +L N ++IGM PN ++PVP E L + V D +Y
Sbjct: 168 V-GMIVPTKIVEQGEGEAAIADSSLLINTTSIGMLPNVQETPVPAEWLHSGLTVSDLIYN 226
Query: 466 PRNTRLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRKLVLEQF 518
P TRLL+EA +GATV SG+ MF+ Q F L+TG AP MR++VL+Q
Sbjct: 227 PLETRLLKEARAIGATVHSGIGMFVNQGALAFELWTGEQAPTGVMREVVLQQL 279
>sp|A7GT28|AROE_BACCN Shikimate dehydrogenase OS=Bacillus cereus subsp. cytotoxis (strain
NVH 391-98) GN=aroE PE=3 SV=1
Length = 277
Score = 154 bits (390), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 97/288 (33%), Positives = 152/288 (52%), Gaps = 22/288 (7%)
Query: 238 KIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLVDD--VKEFFRTYSGTDFAGFSVG 295
+++G++ NP+GHS P++HN AF H + Y LV++ + E + +G +V
Sbjct: 3 QLYGVIGNPIGHSLSPLMHNDAFEHLGIDAHYHAFLVEEEMLGEAVKGLKALGVSGINVT 62
Query: 296 IPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALRERQGI 355
PHK + DE+ PLAK IGAVNT++ R +GKLVGYNTD + +++ +E
Sbjct: 63 TPHKVAIMKYLDEIDPLAKQIGAVNTVVHR--NGKLVGYNTDGIGYVRSLQAISKE---- 116
Query: 356 NGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGARVI-IFNRNYERAKAL----ADAV 410
P+ K +L+GAGGA RA+ + G + I I NR E AK L + V
Sbjct: 117 --------PLRHKRMLLLGAGGACRAIYCSLVAAGVKEIDIANRTVETAKQLIASSKERV 168
Query: 411 SGEALHFEYLHEFFPEKGMILANASAIGMEPNSDQSPVPKEALKAYELVFDAVYTPRNTR 470
+AL E E E +L + IGM P+ +P+ +LK +V D +Y P T+
Sbjct: 169 VSKALSLEKATEA-QENYDVLIQTTTIGMHPHVQHTPMQIGSLKQGAIVSDIIYNPFETK 227
Query: 471 LLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRKLVLEQF 518
L +A GA V +G++MF+ Q F ++TG + + M++LV+ +
Sbjct: 228 FLHDAKLSGAIVQNGIDMFVYQGALAFEMWTGMMPDINRMKQLVIRKL 275
>sp|Q8TZ24|AROE_METKA Shikimate dehydrogenase OS=Methanopyrus kandleri (strain AV19 / DSM
6324 / JCM 9639 / NBRC 100938) GN=aroE PE=3 SV=1
Length = 290
Score = 152 bits (384), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 109/299 (36%), Positives = 157/299 (52%), Gaps = 29/299 (9%)
Query: 233 INPDTKIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLV--DDVKEFFRTYSGTDFA 290
++ +T + GL+ +PV HS P +HN AF+ N +Y+ V + ++ R +
Sbjct: 7 VDAETNVVGLIGHPVEHSLSPAMHNAAFKELGLNYVYLAFDVPPERLEGAVRGAADLGIV 66
Query: 291 GFSVGIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALR 350
G +V IPHKE + CDE+ A+ IGAVNT+ R GK+ G+NTD E + A LR
Sbjct: 67 GLNVTIPHKEAVMELCDELDRDAELIGAVNTV--RFSRGKIEGFNTDGEGFLRA----LR 120
Query: 351 ERQGINGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGA-RVIIFNRNYERAKALAD- 408
E ++ P G V++GAGGA RA++F + GA ++I NR +RA+ LA+
Sbjct: 121 EE-------TYFDP-RGTKSVILGAGGAARAVSFKLATEGADEIVIANRTVDRAERLAEE 172
Query: 409 -----AVSGEALHF---EYLHEFFPEKGMILANASAIGMEPNSDQSP-VPKEALKAYELV 459
V A+ E E +L +A+ +GM PN D+ P V + + +V
Sbjct: 173 LKEKVGVKARAIGLDGDEIEREL--RDADLLVDATPVGMYPNEDEPPLVTADQMHEDLIV 230
Query: 460 FDAVYTPRNTRLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRKLVLEQF 518
D VY P TRLL EA + GAT VSGV M + Q F L+TG AP + MR+ VLE
Sbjct: 231 NDLVYNPPRTRLLEEAEKAGATPVSGVGMLVYQGALAFELWTGEEAPVEVMREAVLEHL 289
>sp|Q8RAG2|AROE_THETN Shikimate dehydrogenase OS=Thermoanaerobacter tengcongensis (strain
DSM 15242 / JCM 11007 / NBRC 100824 / MB4) GN=aroE PE=3
SV=1
Length = 280
Score = 152 bits (384), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 98/289 (33%), Positives = 149/289 (51%), Gaps = 30/289 (10%)
Query: 233 INPDTKIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYV-----PMLVDDVKEFFRTYSGT 287
I+ TK+FGL+ +PV HS P++HN +F FNG+YV P L+++ +
Sbjct: 3 IDSTTKVFGLIGHPVKHSLSPLIHNSSFEKLNFNGVYVVFDVAPELLENA---VKGLKAL 59
Query: 288 DFAGFSVGIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIED 347
GF+V +PHKE + D V A+ IGAVNT++ +G L GYNTD + I D
Sbjct: 60 GIKGFNVTVPHKESVMNYLDFVTEEAEKIGAVNTVVNE--NGILKGYNTDVQGFI----D 113
Query: 348 ALRERQGINGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGAR-VIIFNRNYERAKAL 406
+L+E + + G+ ++GAGGA +A+ F G ++I NR +AKAL
Sbjct: 114 SLKELK---------EDVRGRKAFVLGAGGASKAICFALAREGVESIVIANRTLNKAKAL 164
Query: 407 ADAVSGE-ALHFEYLH----EFFPEKGMILANASAIGMEPNSDQSPVPKEALKAYELVFD 461
A+ + E + +Y E F E IL N +++GM P SPV +E + V+D
Sbjct: 165 AEYIREEFKMKCDYCSIEEVEKFNEID-ILINTTSVGMHPEVGNSPVSEEVVAKANFVYD 223
Query: 462 AVYTPRNTRLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFM 510
+Y P T L+ A + G +G+ M + QA F L+TG +DF+
Sbjct: 224 LIYNPSETLFLKYARKNGVKSANGLSMLVNQASYAFYLWTGEFFDKDFV 272
>sp|Q8U0A6|AROE_PYRFU Shikimate dehydrogenase OS=Pyrococcus furiosus (strain ATCC 43587 /
DSM 3638 / JCM 8422 / Vc1) GN=aroE PE=3 SV=1
Length = 271
Score = 152 bits (383), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 100/285 (35%), Positives = 147/285 (51%), Gaps = 24/285 (8%)
Query: 233 INPDTKIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLVD-DVKEFFRTYSGTDFAG 291
IN +TKI+G++ NPV HS PI+HN F+ N IYVP V D+K D G
Sbjct: 2 INGETKIYGIIGNPVKHSLSPIMHNALFKKFGINAIYVPFEVKKDLKNAINGVKALDIQG 61
Query: 292 FSVGIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALRE 351
+V +P+KE + DE+ +++IG+VNT++ ++GKLVGY TD A A+E +
Sbjct: 62 VNVTMPYKEEVIKFLDELSEDSQNIGSVNTVVN--LEGKLVGYTTDGIGARRALE-RFTQ 118
Query: 352 RQGINGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGARVIIFNRNYERAKALAD-AV 410
G N +L+ G S+ A V++ NR E+AK L +
Sbjct: 119 VDGAN--------------ILILGAGGAGKAIAYELSKVANVVVLNRTIEKAKRLEKFGI 164
Query: 411 SGEALHFEYLHEFFPEKGMILANASAIGMEPNSDQSPVPKEALKAYELVFDAVYTPRNTR 470
G++L ++ E IL NA+++GM N ++S VPK L+ +V D VY P NT
Sbjct: 165 VGDSLE---ALPYYVEWADILINATSVGM--NEEKSLVPKNLLRPGLVVMDIVYKPLNTL 219
Query: 471 LLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRKLVL 515
LLR A E G + G+ M + Q FRL+TG + MR++ L
Sbjct: 220 LLRYAQEKGCIAIDGLWMLVYQGAESFRLWTGEEGDVELMRRVAL 264
>sp|Q46DZ6|AROE_METBF Shikimate dehydrogenase OS=Methanosarcina barkeri (strain Fusaro /
DSM 804) GN=aroE PE=3 SV=1
Length = 280
Score = 150 bits (379), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 101/290 (34%), Positives = 143/290 (49%), Gaps = 23/290 (7%)
Query: 238 KIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLV--DDVKEFFRTYSGTDFAGFSVG 295
++FG+ +P+ HS P +HN AF + IY V + +++ F G ++
Sbjct: 3 QVFGVFGDPIAHSLSPAMHNAAFSALGMDCIYHAFRVKPEKLEKAILGAEAMGFGGLNLT 62
Query: 296 IPHKEPAVAC-CDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALRERQG 354
+P KE A+ C + PLA+ IGAVNTI+ G++ GYNTD A A++++ E +G
Sbjct: 63 VPLKETALKLDCIKPDPLAEKIGAVNTIVFGET-GEIKGYNTDGLGAKQALQNSAVEMEG 121
Query: 355 INGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGARVIIFNRNYERAKALADAVSGEA 414
V+ GAGGA R++AF + GA + I NR RA LA +S +
Sbjct: 122 SK-------------IVVTGAGGAARSIAFQLAADGAEITIVNRTEGRAIELAKDISAAS 168
Query: 415 LHFEYLHEFFP------EKGMILANASAIGMEPNSDQSPVPKEALKAYELVFDAVYTPRN 468
L + + IL N + +GM PN D + E L VFD VY P
Sbjct: 169 LSGNVTGKGLSGLKNLLQDANILINTTTLGMHPNVDTAIATAEDLHPDLTVFDIVYNPLE 228
Query: 469 TRLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRKLVLEQF 518
TRLLREA GA VSGV M + Q F+L+TG P + M+K VLE
Sbjct: 229 TRLLREAKASGAKTVSGVLMLVYQGAEAFKLWTGIEPPVELMKKTVLEAL 278
>sp|C5D4W2|AROE_GEOSW Shikimate dehydrogenase OS=Geobacillus sp. (strain WCH70) GN=aroE
PE=3 SV=1
Length = 277
Score = 147 bits (372), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 97/287 (33%), Positives = 143/287 (49%), Gaps = 20/287 (6%)
Query: 238 KIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLVD--DVKEFFRTYSGTDFAGFSVG 295
K++ L PV HS PI+HN AF++ Y V+ +K+ +G +V
Sbjct: 3 KLYALFGCPVHHSLSPIMHNDAFQNMNIAAHYHAFHVEPERLKDAIAGVRALGISGVNVT 62
Query: 296 IPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALRERQGI 355
IPHK + DEV P A+ IGAVNTI+ R +G+L+GYNTD + A+E+ +
Sbjct: 63 IPHKTAVMPLLDEVDPTARRIGAVNTIVNR--NGRLIGYNTDGPGYVRALEEEI------ 114
Query: 356 NGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGARVI-IFNRNYERAKALADAVSGEA 414
I K +L+GAGGA R + RGA+ I I NR +AK L D +
Sbjct: 115 ------NVDIKEKRILLIGAGGAARGIYVSLADRGAKQIDICNRTVSKAKQLIDECNASV 168
Query: 415 LHFEY-LHEFFPEKGM--ILANASAIGMEPNSDQSPVPKEALKAYELVFDAVYTPRNTRL 471
Y L+E G IL N +++GM PN ++ P+ +K +V D +Y P T+
Sbjct: 169 SSVVYSLNEAEERLGEYDILINTTSVGMYPNMEEMPLSLANMKEETIVSDIIYNPLETKW 228
Query: 472 LREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRKLVLEQF 518
L+EA + + +GV MF+ Q F +TG M+K+V+EQ
Sbjct: 229 LKEARKRNGIIQNGVGMFVYQGALAFEKWTGIFPDVQRMKKIVIEQL 275
>sp|Q8YVC1|AROE_NOSS1 Shikimate dehydrogenase OS=Nostoc sp. (strain PCC 7120 / UTEX 2576)
GN=aroE PE=3 SV=1
Length = 289
Score = 145 bits (367), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 86/300 (28%), Positives = 156/300 (52%), Gaps = 29/300 (9%)
Query: 233 INPDTKIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLV--DDVKEFFRTYSGTDFA 290
I TK+ G++ +PV HS P++HN A + +Y+P + D+++ +
Sbjct: 2 ITGKTKLLGVIGHPVEHSLSPVMHNAAIAQLGLDYVYLPFPIAPDNLEAAIALLATIGVV 61
Query: 291 GFSVGIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALR 350
GFSV IPHK+ + E+ P+A++IGAVNT+ R+ + + VG NTD E I+ ++ +
Sbjct: 62 GFSVTIPHKQAIIPLLSEISPVAQAIGAVNTVTRQ--NNQWVGTNTDIEGFIAPLQTTYK 119
Query: 351 ERQGINGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRG-ARVIIFNRNYERAK----A 405
+ +I V++G GGA RA+ G G A + + RN +R + +
Sbjct: 120 RDW------------SQQIAVILGNGGAARAVVAGCYQLGFAEIHVVGRNVQRLEEFRHS 167
Query: 406 LADAVSGEALH---FEYLHEFFPEKGMILANASAIGMEPNSDQSPVPKEALKAYE---LV 459
++ E L ++YL + P+ + L N + IGM P D+SP+ E L + +
Sbjct: 168 WENSPIAENLQVHTWDYLAKLIPQANL-LVNTTPIGMYPQVDESPLSAEELVNLQTGTIA 226
Query: 460 FDAVYTPRNTRLLREAAEVGATVVSGVEMFIRQALGQFRLF-TGGLAPEDFMRKLVLEQF 518
+D +Y P+ T+ L++A + GA ++ G+EM ++Q + +++ P D MR+ +++
Sbjct: 227 YDLIYIPKPTQFLQKAQQQGAIIIDGLEMLVQQGVAALKIWLQQDDIPVDVMRQALIKHL 286
>sp|A5UMF6|AROE_METS3 Shikimate dehydrogenase OS=Methanobrevibacter smithii (strain PS /
ATCC 35061 / DSM 861) GN=aroE PE=3 SV=1
Length = 281
Score = 145 bits (367), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 101/290 (34%), Positives = 148/290 (51%), Gaps = 28/290 (9%)
Query: 233 INPDTKIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLV--DDVKEFFRTYSGTDFA 290
IN TKI GL+ +PV HS P +HN AF + YVP V +++K +
Sbjct: 2 INGSTKIVGLIGHPVEHSFSPPMHNAAFEELGLDYAYVPFNVCPENLKSAILGAKSLNIK 61
Query: 291 GFSVGIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALR 350
GF+V IPHK + D++ P+AK IGAVNTI + ++ GYNTD I AI
Sbjct: 62 GFNVTIPHKINVMKYLDKLDPIAKLIGAVNTIDFK----EMKGYNTDGIGCIKAI----- 112
Query: 351 ERQGINGVASHTSPIAGKIFVLVGAGGAGRALAFG-AKSRGARVIIFNRNYERAKALADA 409
+ I K V+ GAGGA RA++F A+ + I NR+ +AK+LA+
Sbjct: 113 ---------GEVTSIKDKNIVVAGAGGASRAISFYLARENPQSIHILNRDINKAKSLAED 163
Query: 410 VSGEAL----HFEYLHEF--FPEKGMILANASAIGMEPN-SDQSPVPKEALKAYELVFDA 462
+ L F+ + + + IL + + +GM P+ +D++ V E + + +V D
Sbjct: 164 LKNSKLTDNVDFDSIDKIVGYVSDADILIDTTPVGMSPHVNDEAIVKAEDMHSDLVVNDI 223
Query: 463 VYTPRNTRLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRK 512
VY P T LL EA + GAT V G++M + Q F ++TG AP D M K
Sbjct: 224 VYNPNETVLLSEAIKAGATPVYGIKMLLYQGAESFEIWTGEKAPVDVMEK 273
>sp|Q3M8H2|AROE_ANAVT Shikimate dehydrogenase OS=Anabaena variabilis (strain ATCC 29413 /
PCC 7937) GN=aroE PE=3 SV=1
Length = 289
Score = 143 bits (360), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 84/294 (28%), Positives = 149/294 (50%), Gaps = 29/294 (9%)
Query: 233 INPDTKIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLV--DDVKEFFRTYSGTDFA 290
I TK+ G++ +PV HS P++HN A + +Y+P + D+++ +
Sbjct: 2 ITGKTKLLGVIGHPVEHSLSPVMHNAAIAQLGLDYVYLPFPIAPDNLEAAIALLATIGVV 61
Query: 291 GFSVGIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALR 350
GFSV IPHK+ + E+ P+A++IGAVNT+ R+ + + VG NTD E I+ ++ +
Sbjct: 62 GFSVTIPHKQAIIPLLAEISPVAQAIGAVNTVTRQ--NNQWVGTNTDIEGFIAPLQTTYK 119
Query: 351 ERQGINGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRG-ARVIIFNRNYERAKALADA 409
+ +I V++G GGA RA+ G G A + + RN +R + +
Sbjct: 120 RDW------------SQQIAVILGNGGAARAVVAGCYQLGFAEIHVVGRNVQRLEEFRHS 167
Query: 410 VSGEAL-------HFEYLHEFFPEKGMILANASAIGMEPNSDQSPVPKEALKAYE---LV 459
+ ++YL + P+ + L N + IGM P D+SP+ E L + +
Sbjct: 168 WDNSPIAENLQVHTWDYLAKLVPQANL-LVNTTPIGMYPQVDESPLSTEELANLQTGAIA 226
Query: 460 FDAVYTPRNTRLLREAAEVGATVVSGVEMFIRQALGQFRLF-TGGLAPEDFMRK 512
+D +Y P+ T+ L++A + GA + G+EM ++Q + +++ P D MR+
Sbjct: 227 YDLIYIPKPTQFLQKAQQQGAIAIDGLEMLVQQGVAALKIWLQQDDIPVDVMRQ 280
>sp|Q3ZZN3|AROE_DEHSC Shikimate dehydrogenase OS=Dehalococcoides sp. (strain CBDB1)
GN=aroE PE=3 SV=1
Length = 286
Score = 142 bits (357), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 94/288 (32%), Positives = 143/288 (49%), Gaps = 27/288 (9%)
Query: 235 PDTKIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLV--DDVKEFFRTYSGTDFAGF 292
PD +FG++ PV HS P + N AF+H + N +Y+ + +D++ + + G
Sbjct: 5 PDA-LFGIIGYPVSHSVSPAMQNAAFKHCKLNYLYLTIAAKPEDLQNVIASMRPLNIRGL 63
Query: 293 SVGIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALRER 352
+V IPHK + D + P AK IGAVNTI+ +G+L GYNTD + +E
Sbjct: 64 NVTIPHKIEVIKYIDTLDPAAKKIGAVNTIVNE--NGQLKGYNTDFGGFVRLLEH----- 116
Query: 353 QGINGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGARVIIFNRNYERAKALADAV-- 410
N +A A F L+GAGG+ A++ + G + + R E+AK LA +
Sbjct: 117 ---NRIAP-----AKHRFALLGAGGSAHAISLAICTLGGHLTVLARQEEKAKDLAAKMCL 168
Query: 411 ------SGEALHFEYLHEFFPEKGMILANASAIGMEPNSDQSPVPKEALKAYELVFDAVY 464
G L+ L E E +I+ N + IGM + QS +P L+ V DA+Y
Sbjct: 169 RFKGKAQGLELNEANLEETLAESDIIV-NCTPIGMGNLAGQSLIPPRLLRPDLTVIDAIY 227
Query: 465 TPRNTRLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRK 512
P TRLL +A + GA +++G+EM + Q F ++T AP M K
Sbjct: 228 NPCKTRLLEDAEKKGAKIINGLEMLVWQGAMSFEIWTSQKAPFRVMMK 275
>sp|Q5WHI2|AROE_BACSK Shikimate dehydrogenase OS=Bacillus clausii (strain KSM-K16)
GN=aroE PE=3 SV=1
Length = 275
Score = 141 bits (356), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 83/282 (29%), Positives = 146/282 (51%), Gaps = 17/282 (6%)
Query: 237 TKIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLV--DDVKEFFRTYSGTDFAGFSV 294
T+ FGL+ +P+GHSK P++H A++ + +Y + ++ RT GF+V
Sbjct: 2 TRQFGLIGHPLGHSKSPVMHEAAYKDMGLDAVYCAYDISPQELGNAIRTMKAQGIDGFNV 61
Query: 295 GIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALRERQG 354
IPHK + DE+ A+++GAVNT++ + DG+ VG NTD + I ++ + ++
Sbjct: 62 TIPHKVAIIDYLDEIDEDAEAMGAVNTVVCQ--DGRWVGKNTDADGYIESLLPVVSDQS- 118
Query: 355 INGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGARVIIFNRNYERAKALADAVSGEA 414
+ G+ +++GAGGA RA+ + A + + NR E+A+ LA S
Sbjct: 119 ----------LTGRRVLVIGAGGAARAVIHALGKQRATISVSNRTAEKAQELAQLFSHLT 168
Query: 415 LHFEYLHEFFPEKGM--ILANASAIGMEPNSDQSPVPKEALKAYELVFDAVYTPRNTRLL 472
+ L+E G +L N +++GM P++ + P+ + LK +V D +Y P T LL
Sbjct: 169 IEAIPLNEAESTLGTYDVLINTTSVGMYPDTSKQPIALDRLKQATIVSDLIYNPYETALL 228
Query: 473 REAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRKLV 514
+EA + G +++G+ MF+ Q +TG M ++V
Sbjct: 229 QEAKQRGNRILNGIGMFVNQGALSIEHWTGRKPNRKCMERVV 270
>sp|A8MEE1|AROE_ALKOO Shikimate dehydrogenase OS=Alkaliphilus oremlandii (strain OhILAs)
GN=aroE PE=3 SV=1
Length = 286
Score = 141 bits (355), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 96/292 (32%), Positives = 152/292 (52%), Gaps = 27/292 (9%)
Query: 233 INPDTKIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLV--DDVKEFFRTYSGTDFA 290
I +TK+ G++ P+ S P +HN AF++ N IY+P V D+ + F
Sbjct: 5 ITDETKLTGIIGRPIKQSFSPKIHNGAFQYLNLNYIYIPFEVVQQDLSKTVEAMKVLKFR 64
Query: 291 GFSVGIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALR 350
GF+V +PHK + DEV AK IGAVNT++ + +GKLVG+NTD + + ++ED
Sbjct: 65 GFNVTMPHKREVMNYLDEVSENAKIIGAVNTVVNQ--NGKLVGHNTDGKGYVQSLED--- 119
Query: 351 ERQGINGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGAR-VIIFNRNYERAKALADA 409
+GI + K FV+ GAGGA R++A GA+ + I NR ++A +A
Sbjct: 120 --EGI--------YVKEKTFVIAGAGGAARSVAVQLALDGAKKITILNRTIDKAHDIAQL 169
Query: 410 V--SGEALHFEY--LHEFFPEKGM----ILANASAIGMEPNSDQSPVPKEALKAYELVF- 460
+ S +H E L K + +L N +++GM ++S + +E + LV
Sbjct: 170 IGMSIPNVHIEINCLENKTLAKAVEEADVLINTTSLGMYSMEEESIIGEEKVLPSNLVVS 229
Query: 461 DAVYTPRNTRLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRK 512
D +Y P T+LL++A G ++G+ M I QA F L+T P D+++K
Sbjct: 230 DLIYNPAKTKLLQQAESRGCKTINGLGMLIGQAAIAFELWTEVAMPIDYIKK 281
>sp|Q6C1X5|ARO1_YARLI Pentafunctional AROM polypeptide OS=Yarrowia lipolytica (strain CLIB
122 / E 150) GN=ARO1 PE=3 SV=1
Length = 1556
Score = 140 bits (353), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 147/509 (28%), Positives = 231/509 (45%), Gaps = 47/509 (9%)
Query: 33 EGADLVELCIDSM---------EFSHISEVDKLIQHPTLPAIVSYRLKSS--RKSSDEAC 81
EG +EL +D + E +S++ L Q+ LP + + R K+ R D+
Sbjct: 1067 EGCSALELRVDLLNENDEAIPSEEYVLSQLAILRQNVDLPILYTVRTKAQGGRFPDDKPV 1126
Query: 82 KNTCLQVLRRALDLDVEFVEMDYEVASDPLMSEIIYSRSNTKIIVSSY-LNGGGKPTTEK 140
+ L L +++ VE+ Y L+S + SR TK++ S + G ++ +
Sbjct: 1127 ELANLVNLGLKTAVELLDVELTYPAE---LVSSVGASRGYTKLLGSHHDFPGALNWSSLE 1183
Query: 141 LGDVIACMQATGADVMKLEIAVDSITDLAPVFEML-THCQVPLIALAVGSRGLISQ---- 195
++ A +A DV+KL S +D + H PL+A+ +GS G +S+
Sbjct: 1184 WENMYARAEAVPVDVVKLVGMAKSFSDNFALENFREAHTSSPLLAINMGSHGQLSRVTNT 1243
Query: 196 LLGPKFGGFLVYGSLGGKSVPGLPTLVSLKQVYQLEHINPDTKIFGLVSNPVGHSKGPIL 255
LL P + + L + PG ++ + Q + F +V P+GHSK PIL
Sbjct: 1244 LLTP-----VTHADLPVAAAPGQLSVEEINQTRSTIGMFNKNLSFFIVGTPIGHSKSPIL 1298
Query: 256 HNPAFRHTRFNGIYVPMLVDDVKEFFRT----YSGTDFAGFSVGIPHKEPAVACCDEVHP 311
HN F+ Y DD + + G SV IP K+ + DEV P
Sbjct: 1299 HNTMFKKLGLPYEYSRFKTDDAAAVNAKARALLAQGNLGGISVTIPLKQDIIPFLDEVSP 1358
Query: 312 LAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALRERQGINGVASHTSPIAGKIFV 371
LA+ IGAVNTII P +G L G NTD ++A+ R G N + T+ +
Sbjct: 1359 LAQQIGAVNTIIPGP-NGTLKGDNTDILGLVNAL-----TRFGANSLDKKTA-------L 1405
Query: 372 LVGAGGAGRALAFGAKSRG-ARVIIFNRNYERAKALADAVSG-EALHFEYL--HEFFPEK 427
+VGAGG A G +S G A+++I NR +A+A+AD EA+ + +++ P
Sbjct: 1406 IVGAGGTSLAAVHGLRSLGFAKILIANRTLSKAEAIADKFDNVEAVTLDSFVANKYTPSV 1465
Query: 428 GMILANASAIGMEPNSDQSPVPKEALKAYELVFDAVYTPRNTRLLREAAEV-GATVVSGV 486
+ A+ M S++ A LV +A Y+ T LL++ +V G +SG+
Sbjct: 1466 IVSCVPATTFSMLDESNKLVSAALAASPKGLVLEAAYSAEATPLLKQVMDVEGWEFISGL 1525
Query: 487 EMFIRQALGQFRLFTGGLAPEDFMRKLVL 515
M Q QFRL+TG AP++ K VL
Sbjct: 1526 YMLTEQGFEQFRLWTGIPAPKEVGEKAVL 1554
>sp|A4J3A0|AROE_DESRM Shikimate dehydrogenase OS=Desulfotomaculum reducens (strain MI-1)
GN=aroE PE=3 SV=1
Length = 291
Score = 140 bits (352), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 105/296 (35%), Positives = 155/296 (52%), Gaps = 25/296 (8%)
Query: 233 INPDTKIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLV--DDVKEFFRTYSGTDFA 290
IN T++ GL PV HS P +HN AF+ N YVP V D++K+ + A
Sbjct: 6 INGKTQVCGLFGFPVEHSFSPAMHNAAFQQLDLNWTYVPFRVHPDNLKQAVTGIFSLNMA 65
Query: 291 GFSVGIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALR 350
G +V +PHK+ + DE+ P A+ IGAVNTI+ +GKLVGYNTD + + A+ + R
Sbjct: 66 GVNVTVPHKQRVMPFLDELEPAARIIGAVNTIVNN--NGKLVGYNTDGKGFVRALTEEAR 123
Query: 351 ERQGINGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGARVI-IFNRNYERAKALA-- 407
+P+ GK +L+GAGGA RA+A G R I I NRN E+A+ LA
Sbjct: 124 -----------FNPL-GKSAILIGAGGAARAVAVQLALSGLRTIYITNRNQEKAEELARD 171
Query: 408 --DAVSGEALHFEYLHEFFPEKGM---ILANASAIGMEPNSDQSP-VPKEALKAYELVFD 461
++ A + + ++ + ++ A+ +GM P DQ P P + L LV D
Sbjct: 172 ILESTDTSASMIPWGNNLLGKRMVEVDLVVQATPLGMSPEVDQVPEFPFQMLTPQHLVCD 231
Query: 462 AVYTPRNTRLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRKLVLEQ 517
+Y P T LR A G+ ++G+ M + Q + F L+TG AP D MR ++ +Q
Sbjct: 232 LIYNPEQTCFLRRAKSRGSKTMNGLAMLLYQGVLAFELWTGFTAPVDVMRNVLHKQ 287
>sp|A6UU64|AROE_META3 Shikimate dehydrogenase OS=Methanococcus aeolicus (strain Nankai-3
/ ATCC BAA-1280) GN=aroE PE=3 SV=1
Length = 278
Score = 139 bits (351), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 87/291 (29%), Positives = 151/291 (51%), Gaps = 23/291 (7%)
Query: 233 INPDTKIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLVD--DVKEFFRTYSGTDFA 290
IN TK+ GL+ +PV HS P +HN A + N +Y+ V+ ++K+ +
Sbjct: 2 INSKTKLLGLIGHPVEHSLSPTMHNEAIKDKDLNYVYLAFDVESENLKDVVNGAKAIGWK 61
Query: 291 GFSVGIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALR 350
GF++ IPHK + D++ AK IGAVNT+ + + K +GYNTD A +IE+ +
Sbjct: 62 GFNITIPHKIEIMKYLDKIDNDAKLIGAVNTV--KIENNKAIGYNTDGIGARLSIEEIIG 119
Query: 351 ERQGINGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGARVIIFNRNYERAKALADAV 410
E + N +++GAGG+ RA+ ++ + I NR E+A+ +A+ +
Sbjct: 120 EVKDYN-------------ILVIGAGGSSRAVCCEL-AKNNNLTIINRTVEKAEIIANDL 165
Query: 411 SGE---ALHFEYL-HEFFPEKGMILANASAIGMEPNSDQSP-VPKEALKAYELVFDAVYT 465
S + A+++ L H + I+ N +++GM PN D P + + +K +V D +Y
Sbjct: 166 SNKLNNAVYYGGLNHNYNMANFDIIINTTSLGMYPNVDNKPPISMQNIKKDAVVMDLIYN 225
Query: 466 PRNTRLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRKLVLE 516
P+ T L+EA E G ++G+ M I Q F ++TG + M+ +++
Sbjct: 226 PKETLFLKEAKEKGCATINGLGMLIYQGAKSFEIWTGVKPDINIMKNAIID 276
>sp|P54374|AROE_BACSU Shikimate dehydrogenase OS=Bacillus subtilis (strain 168) GN=aroD
PE=3 SV=2
Length = 280
Score = 139 bits (350), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 94/286 (32%), Positives = 149/286 (52%), Gaps = 24/286 (8%)
Query: 238 KIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLV--DDVKEFFRTYSGTDFAGFSVG 295
K++G++ NP+GHS P +HN + + +G Y V +D+++ + G +V
Sbjct: 3 KLYGVIGNPIGHSMSPDIHNASLKDLGLDGHYHAFKVEENDLEDAVKGIRALGVQGINVT 62
Query: 296 IPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALRERQGI 355
+PHK + D + AK +GAVNT+ RR D KLVGYNTD E + ++ L +
Sbjct: 63 VPHKVSIMDYLDHIDESAKVLGAVNTV-RREGD-KLVGYNTDGEGFVKSLMKVLDK---- 116
Query: 356 NGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGA--RVIIFNRNYERAKALADAV--- 410
PI+ F+++GAGGA RA+ F R + I NR E+AK L +A
Sbjct: 117 --------PISELSFLMIGAGGAARAI-FTTIVRNTPKKFDICNRTLEKAKRLTEATPSF 167
Query: 411 -SGEALHFEYLHEFFPEKGMILANASAIGMEPNSDQSPVPKEALKAYELVFDAVYTPRNT 469
+ E L + E + +I+ + +++GM PN D P+ + + +V D VY P T
Sbjct: 168 HNKEVLSIKEAEERLEQYDVII-HTTSVGMYPNVDDVPLSLQRAASSAVVCDIVYNPIQT 226
Query: 470 RLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRKLVL 515
LL+EA++ G + GV MF+ QA F+L+TG + MR +V+
Sbjct: 227 ALLKEASQKGLKTLDGVGMFVEQAALSFQLWTGQEPNIEKMRSIVI 272
>sp|Q5JFT1|AROE_PYRKO Shikimate dehydrogenase OS=Pyrococcus kodakaraensis (strain ATCC
BAA-918 / JCM 12380 / KOD1) GN=aroE PE=3 SV=1
Length = 272
Score = 139 bits (349), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 101/286 (35%), Positives = 156/286 (54%), Gaps = 23/286 (8%)
Query: 234 NPDTKIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLV--DDVKEFFRTYSGTDFAG 291
+ +T+++G++ P HS P++HN AFR N +Y+ V +++ E +G
Sbjct: 3 DAETRLYGVIGFPARHSLSPVMHNAAFRALGINAVYLAFEVPPEELGEAIGGAKALGISG 62
Query: 292 FSVGIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALRE 351
+V +PHKE + D + + IG+VNT++ R G+L G+ TD A A+E A+
Sbjct: 63 LNVTMPHKEAVIHFLDSLSEDSGEIGSVNTVVNR--KGRLEGHTTDGLGARRALERAIE- 119
Query: 352 RQGINGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGARVIIFNRNYERAKALAD-AV 410
+ G+ +++GAGGAG+A+A+ SR V++ NR E+AKAL +
Sbjct: 120 -------------LGGRRILIIGAGGAGKAIAY-ELSRDNEVVVLNRTPEKAKALERFGI 165
Query: 411 SGEALHFEYLHEFFPEKGMILANASAIGMEPNSDQSPVPKEALKAYELVFDAVYTPRNTR 470
+G+AL+ E L E+ E +L NA+++GM NS ++PVP E L+ +V D VY P TR
Sbjct: 166 TGDALNRENLGEYL-EWAEVLINATSVGM--NSWETPVPAELLRRDLVVMDIVYKPLKTR 222
Query: 471 LLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRKLVLE 516
LL EA G V G+ M + Q + FRL+TG E MR LE
Sbjct: 223 LLTEAELRGCKTVDGLWMLVYQGIESFRLWTGFKPDEGLMRGAALE 268
>sp|Q3Z990|AROE_DEHE1 Shikimate dehydrogenase OS=Dehalococcoides ethenogenes (strain 195)
GN=aroE PE=3 SV=1
Length = 286
Score = 138 bits (348), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 92/288 (31%), Positives = 144/288 (50%), Gaps = 27/288 (9%)
Query: 235 PDTKIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLV--DDVKEFFRTYSGTDFAGF 292
PD +FGL+ PV HS P + N AF+H + + +Y+ + ++++ + + G
Sbjct: 5 PDA-LFGLIGFPVSHSVSPAMQNAAFKHCKLDYLYLTIAAKPEELQNVIASMGPLNIRGL 63
Query: 293 SVGIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALRER 352
+V IPHK + D + P A+ IGAVNTI+ +G+L GYNTD + +E
Sbjct: 64 NVTIPHKIEVIKYIDSLDPAAEKIGAVNTIVNE--NGRLKGYNTDFGGFVRLLEH----- 116
Query: 353 QGINGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGARVIIFNRNYERAKALADAV-- 410
N +A A + F L+GAGG+ A+A + G + + R E+AK LA +
Sbjct: 117 ---NRIAP-----AKQRFTLLGAGGSAHAIALAVCNLGGHLTVLARQEEKAKDLAGKMCL 168
Query: 411 ------SGEALHFEYLHEFFPEKGMILANASAIGMEPNSDQSPVPKEALKAYELVFDAVY 464
G L+ L E + +I+ N + +GM + QS VP L+ V DA+Y
Sbjct: 169 RLSGKTQGLELNDTNLEEALADTDVIV-NCTPVGMGNLAGQSLVPPRLLRPDLTVIDAIY 227
Query: 465 TPRNTRLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRK 512
P TRLL +A + GA +++G+EM + Q F ++T AP M K
Sbjct: 228 NPCKTRLLEDAEKRGARIINGLEMLVWQGAMSFEIWTNQKAPFRLMMK 275
>sp|A5FRZ5|AROE_DEHSB Shikimate dehydrogenase OS=Dehalococcoides sp. (strain BAV1)
GN=aroE PE=3 SV=1
Length = 286
Score = 138 bits (347), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 92/288 (31%), Positives = 142/288 (49%), Gaps = 27/288 (9%)
Query: 235 PDTKIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLV--DDVKEFFRTYSGTDFAGF 292
PD +FG++ PV HS P + N AF+H + N +Y+ + +D++ + + G
Sbjct: 5 PDA-LFGIIGYPVSHSVSPAMQNAAFKHCKLNYLYLTIAAKPEDLQNVIASMRPLNIRGL 63
Query: 293 SVGIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALRER 352
+V IPHK + D + P AK IGAVNTI+ +G++ GYNTD + +E
Sbjct: 64 NVTIPHKIEVIKYIDTLDPAAKKIGAVNTIVNE--NGQMKGYNTDFGGFVRLLEH----- 116
Query: 353 QGINGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGARVIIFNRNYERAKALADAV-- 410
N +A A F L+GAGG+ A++ + G + + R E+AK LA +
Sbjct: 117 ---NRIAP-----AKHRFALLGAGGSAHAISLAICTLGGHLTVLARQEEKAKDLAAKMCL 168
Query: 411 ------SGEALHFEYLHEFFPEKGMILANASAIGMEPNSDQSPVPKEALKAYELVFDAVY 464
G L+ L E E +I+ N + IGM + QS + L+ V DA+Y
Sbjct: 169 RFKGKAQGLELNEANLEETLAESDIIV-NCTPIGMGNLAGQSLISPRLLRPDLTVIDAIY 227
Query: 465 TPRNTRLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRK 512
P TRLL +A + GA +++G+EM + Q F ++T AP M K
Sbjct: 228 NPCKTRLLEDAEKKGAKIINGLEMLVWQGAMSFEIWTSQKAPFRVMMK 275
>sp|A6TM69|AROE_ALKMQ Shikimate dehydrogenase OS=Alkaliphilus metalliredigens (strain
QYMF) GN=aroE PE=3 SV=1
Length = 286
Score = 136 bits (343), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 91/294 (30%), Positives = 153/294 (52%), Gaps = 29/294 (9%)
Query: 237 TKIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLV--DDVKEFFRTYSGTDFAGFSV 294
T++ GL+ PV HS P++HN AF+H + +Y+ V D++KE D AGF+V
Sbjct: 9 TRLVGLLGYPVRHSLSPLMHNMAFQHLGLDYVYLVFEVKEDNLKEAVDAMKTLDVAGFNV 68
Query: 295 GIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALRERQG 354
+P+K+ + DE+ A+ IG+VNT++ + +G L GYNTD + + + D +G
Sbjct: 69 TMPNKQKIIPLLDEISEEARLIGSVNTVVNK--NGHLKGYNTDGKGYVMGLAD-----EG 121
Query: 355 INGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGAR-VIIFNRNYERAKALADAV--- 410
I SP GK V+ GAGGA +++A GA+ + I NR E A+ + + +
Sbjct: 122 I-------SP-EGKTIVIAGAGGASKSVAIQLALEGAKEITILNRTVEAAEEICNIINKN 173
Query: 411 ------SGEALHFEYLHEFFPEKGMILANASAIGMEPNSDQSPVPK-EALKAYELVFDAV 463
S L + E + + N + +GM + ++S + + L +V D V
Sbjct: 174 IPTCKTSATGYEDNELKQQLKEADLFI-NCTNLGMGSHEEKSIISSTDILHPDLIVSDVV 232
Query: 464 YTPRNTRLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRKLVLEQ 517
Y P T+LL A EVG ++G+ M I Q F+L+TG P +++++++L +
Sbjct: 233 YAPPKTKLLHMAEEVGCKTINGLGMIIGQGALAFKLWTGEDMPIEYIKRIILSK 286
>sp|P74591|AROE_SYNY3 Shikimate dehydrogenase OS=Synechocystis sp. (strain PCC 6803 /
Kazusa) GN=aroE PE=3 SV=1
Length = 290
Score = 136 bits (343), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 87/300 (29%), Positives = 144/300 (48%), Gaps = 31/300 (10%)
Query: 233 INPDTKIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYV--PMLVDDVKEFFRTYSGTDFA 290
I TK+ G++ PVGHS P++HN A + + YV P+ +D+ +
Sbjct: 4 ITGKTKLLGVIGYPVGHSLSPVMHNAALQAMASDYAYVAFPIAPEDLTIAIAGLGASGVQ 63
Query: 291 GFSVGIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGK-LVGYNTDCESAISAIEDAL 349
G SV IPHK+ + ++ A+ +GAVNT+ R DG G NTD E ++ + +
Sbjct: 64 GLSVTIPHKQVVMPLLTQITETARQVGAVNTLWR---DGHGWQGTNTDVEGFLAPLLELK 120
Query: 350 RERQGINGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRG-ARVIIFNRNYERAKALAD 408
++ +G+ V++G GGA RA+ G G +I+ R+ E+ A+
Sbjct: 121 QDW-------------SGRTAVILGYGGAARAVVVGLTQLGCPEIIVVGRSQEKLAQFAN 167
Query: 409 AVSG-------EALHFEYLHEFFPEKGMILANASAIGMEPNSDQSPVPK---EALKAYEL 458
+ + + L +E L P K +L N++ +GM P+ QSP+ + E L +
Sbjct: 168 SWTDPKIKQALQVLPWEALSTVIP-KASLLINSTPVGMAPHPKQSPLDQSLVEKLPPTAI 226
Query: 459 VFDAVYTPRNTRLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRKLVLEQF 518
+D +YTPR TR L+ A E G + G EM ++Q +++ P D MR+ +L
Sbjct: 227 AYDLIYTPRPTRFLQHAQERGLVTIDGAEMLVQQGAAALKIWLQQEVPVDVMRQALLHHL 286
>sp|A9A233|AROE_NITMS Shikimate dehydrogenase OS=Nitrosopumilus maritimus (strain SCM1)
GN=aroE PE=3 SV=1
Length = 273
Score = 136 bits (342), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 91/289 (31%), Positives = 149/289 (51%), Gaps = 26/289 (8%)
Query: 238 KIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLV--DDVKEFFRTYSGTDFAGFSVG 295
K F ++ +P+ HS P +H+ AFR + Y+ + D++ E AGF+V
Sbjct: 3 KTFAVIGDPIDHSLSPNIHSAAFRELNLDCSYIAYRIPKDELGEGIEGLKKIQIAGFNVT 62
Query: 296 IPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALRERQGI 355
IPHK + D++ IGAVNT++ DG L GYNTD + + + L++R
Sbjct: 63 IPHKIEMMKYLDKIDESCSLIGAVNTVVSN--DGVLKGYNTDMDGFL----EPLKKRN-- 114
Query: 356 NGVASHTSPIAGKIFVLVGAGGAGRALAFG-AKSRGARVIIFNRNYERAKALAD-----A 409
I +L+GAGGA RA+ G AK + + I NR E+A L + +
Sbjct: 115 -------IEIENSNVLLLGAGGAARAIVAGFAKEKAKSITIANRTIEKANNLVEFAKKIS 167
Query: 410 VSGEALHFEYLHEFFPEKGMILANASAIGMEPNSDQSPVPKEALKAYELVFDAVYTPRNT 469
+ A+ + + E + +I+ NA++IG++ ++ SP+ E + +V+D VY P NT
Sbjct: 168 LDANAITIDQVGESAKDYNIIV-NATSIGLQ--NESSPISFEGVNEKTVVYDIVYLPMNT 224
Query: 470 RLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRKLVLEQF 518
L++A E AT++ G EM + QA+ F ++ G AP + M+K +L F
Sbjct: 225 DFLKKAKEKNATIIFGYEMLLGQAVRAFEIWHGMEAPYNAMKKALLGGF 273
>sp|A6VFM7|AROE_METM7 Shikimate dehydrogenase OS=Methanococcus maripaludis (strain C7 /
ATCC BAA-1331) GN=aroE PE=3 SV=1
Length = 280
Score = 136 bits (342), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 92/284 (32%), Positives = 148/284 (52%), Gaps = 26/284 (9%)
Query: 237 TKIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLV--DDVKEFFRTYSGTDFAGFSV 294
TK+ GL+ +PV HS PI+HN A N +Y+ V +++K GF+V
Sbjct: 6 TKLLGLIGHPVDHSFSPIMHNTAIEDLGINYVYLAFDVSEENLKNVVSGAKALQITGFNV 65
Query: 295 GIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALRERQG 354
IPHK + DE+ AK+IGAVNT+ + +GK +GYNTD A + L E+ G
Sbjct: 66 TIPHKINIMKYLDEIDEDAKAIGAVNTV--KIENGKAIGYNTDGIGA----KRTLEEKAG 119
Query: 355 INGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGARVIIFNRNYERAKALADAVSGE- 413
I + K +++G+GGA RA+ F ++ + I NRN E+AK L++ S +
Sbjct: 120 I---------LIDKNILIIGSGGASRAVCFEL-AKDNNLTIINRNIEKAKILSEEFSKKL 169
Query: 414 ----ALHFEYLHEFFPEKGMILANASAIGMEPNSDQSPV-PKEALKAYELVFDAVYTPRN 468
+++ L +IL N + +GM PN++ PV P + +K +V D +Y P
Sbjct: 170 KKQKPINYGDLDLDIKNFDIIL-NTTPVGMHPNTNVDPVIPLKNIKKDAVVMDLIYNPIE 228
Query: 469 TRLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRK 512
L+EA + GA ++G+ M + Q F ++T G+ P+ ++ K
Sbjct: 229 PVFLKEAIKYGAKTINGLGMLVYQGAVSFEIWT-GMKPDIYVMK 271
>sp|B5YJ55|AROE_THEYD Shikimate dehydrogenase OS=Thermodesulfovibrio yellowstonii (strain
ATCC 51303 / DSM 11347 / YP87) GN=aroE PE=3 SV=1
Length = 275
Score = 136 bits (342), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 89/283 (31%), Positives = 147/283 (51%), Gaps = 21/283 (7%)
Query: 233 INPDTKIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLV--DDVKEFFRTYSGTDFA 290
I TKI G+ +P+ H+ P++HN AF + + YV V D +KE +
Sbjct: 2 ITGKTKIIGIFGDPIEHTLSPLIHNEAFSYLGLDYCYVAFNVKKDKLKEAVEAIRALNIR 61
Query: 291 GFSVGIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALR 350
G ++ +PHKE + DE+ K+IGAVNTI+ +G L G+NTD I +++D
Sbjct: 62 GVNITVPHKETVIQYIDELSDEVKNIGAVNTILNN--EGILKGFNTDVNGFILSLKD--- 116
Query: 351 ERQGINGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGARVIIFNRNYERAKALADAV 410
+GI+ + K F+++GAGGA +A+ +G G +V I+NR A A+ +
Sbjct: 117 --EGIS--------MKNKNFLILGAGGAAKAIVYGILKEGGKVYIYNRTPSNALAIKEKF 166
Query: 411 SGEA-LHFEYLHEFFPEKGMILANASAIGMEPNSDQSPVPKEALKAYELVFDAVYTPRNT 469
+ + + EK ++ NA+++G++ + D P+ E +K + D VY T
Sbjct: 167 KKFGFIEIVEMDKSVTEKIDVIVNATSLGLKKD-DPMPLNPELIKPEHVYCDIVYP--ET 223
Query: 470 RLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRK 512
L+REA +G VV G+ M + QA F+++T AP + M+K
Sbjct: 224 PLMREAERIGCKVVGGIGMLLWQAAFAFKIWTEVEAPIEIMKK 266
>sp|Q58484|AROE_METJA Shikimate dehydrogenase OS=Methanocaldococcus jannaschii (strain
ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440)
GN=aroE PE=1 SV=1
Length = 282
Score = 135 bits (341), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 105/296 (35%), Positives = 156/296 (52%), Gaps = 27/296 (9%)
Query: 233 INPDTKIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVP--MLVDDVKEFFRTYSGTDFA 290
IN TK+ GL+ +PV HS PI+HN AF+ N +YV +L +++K
Sbjct: 2 INAKTKVIGLIGHPVEHSFSPIMHNAAFKDKGLNYVYVAFDVLPENLKYVIDGAKALGIV 61
Query: 291 GFSVGIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALR 350
GF+V IPHK + DE+ A+ IGAVNTI + DGK +GYNTD A A+E+ +
Sbjct: 62 GFNVTIPHKIEIMKYLDEIDKDAQLIGAVNTI--KIEDGKAIGYNTDGIGARMALEEEI- 118
Query: 351 ERQGINGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGARVIIFNRNYERAKALADAV 410
+ K V+ GAGGA RA+AF ++ +II NR E+A+ALA +
Sbjct: 119 ------------GRVKDKNIVIYGAGGAARAVAFEL-AKDNNIIIANRTVEKAEALAKEI 165
Query: 411 S-------GEALHFEYLHEFFPEKGMILANASAIGMEPNSDQSPVPK-EALKAYELVFDA 462
+ GE + F L +I+ NA+ IGM PN D P+ K E L+ +V D
Sbjct: 166 AEKLNKKFGEEVKFSGLDVDLDGVDIII-NATPIGMYPNIDVEPIVKAEKLREDMVVMDL 224
Query: 463 VYTPRNTRLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRKLVLEQF 518
+Y P T LL+EA +V A ++G+ M I Q F+++TG + M+ ++++
Sbjct: 225 IYNPLETVLLKEAKKVNAKTINGLGMLIYQGAVAFKIWTGVEPNIEVMKNAIIDKI 280
>sp|Q0AZJ6|AROE_SYNWW Shikimate dehydrogenase OS=Syntrophomonas wolfei subsp. wolfei
(strain Goettingen) GN=aroE PE=3 SV=1
Length = 290
Score = 135 bits (339), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 91/297 (30%), Positives = 150/297 (50%), Gaps = 35/297 (11%)
Query: 237 TKIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLVDDVK--EFFRTYSGTDFAGFSV 294
T++ GL+ P+ HS P++HN + N IY+ + +++ K E +F G +V
Sbjct: 7 TELMGLIGYPLQHSLSPLMHNLTLKKMGLNCIYLALEIEEGKLPEIPSAIRTLNFRGLNV 66
Query: 295 GIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALRERQG 354
IP+KE + DE+ P A + GAVN I + +G L GYNTD + +ALRE +G
Sbjct: 67 TIPYKEKIIPFLDELSPEAAAFGAVNVIKNK--NGHLHGYNTDGRGFV----EALRE-EG 119
Query: 355 INGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRG-ARVIIFNRNYERAKALADAVSGE 413
I+ G+ + +GAGGA R++AF G +R+ + ++ RA+ LA+ ++
Sbjct: 120 ID---------PGERALFIGAGGAARSVAFALAGLGVSRLDFLDLDFSRARQLAEFITSR 170
Query: 414 A-----------LHFEYLHEFFPEKGMILANASAIGMEPNSDQSPVPKEALKAYELVF-D 461
+ L F+ L I+ N S +GM P++ +SPV KE L+ V D
Sbjct: 171 SSSLASAFLMNTLEFQRLSR----TASIIINCSPVGMFPDTGKSPVSKEDLRGSRAVLCD 226
Query: 462 AVYTPRNTRLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRKLVLEQF 518
+Y P +R L E+G ++G+ MF++Q + G P D+M+++V Q
Sbjct: 227 LIYNPLQSRFLSLGQELGLETMNGLGMFVQQGALTLEILLGQKPPLDYMKEVVQNQL 283
>sp|B7KFV3|AROE_CYAP7 Shikimate dehydrogenase OS=Cyanothece sp. (strain PCC 7424) GN=aroE
PE=3 SV=1
Length = 288
Score = 134 bits (337), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 88/293 (30%), Positives = 139/293 (47%), Gaps = 29/293 (9%)
Query: 233 INPDTKIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLV--DDVKEFFRTYSGTDFA 290
I TK+ G++ +PV HS P++HN H N IYVP V +D++
Sbjct: 4 ITGKTKLLGVIGDPVEHSLSPVMHNAVIDHLNLNYIYVPFAVKPEDLRTAIAGLEAIGVV 63
Query: 291 GFSVGIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALR 350
GF++ IPHK+ + + A+ +GAVNT+ R + G NTD ++ ++
Sbjct: 64 GFNLTIPHKQTIIPLLSTISETAQLVGAVNTVWRT--ETGWSGTNTDVHGFLAPLKR--- 118
Query: 351 ERQGINGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGARVI-IFNRNYERA----KA 405
+N S SP V++G GGA RA+ G G R I + R E+ ++
Sbjct: 119 ----LNLPWSQVSP------VILGNGGAARAVVVGCYEMGCRQISVVGRTKEKLDHFYQS 168
Query: 406 LADAVSGEALHFEYLHEFFPE---KGMILANASAIGMEPNSDQSPVPKEALKAYE---LV 459
+ EAL YL E P+ K +L N + +GM P+ DQSPV +K + +
Sbjct: 169 WQNTPIQEALRV-YLWEDLPQLVSKTQLLINTTPLGMSPHIDQSPVDLTVMKKLQPGAIA 227
Query: 460 FDAVYTPRNTRLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRK 512
+D +YTP T L+EA + GA ++ G+EM +Q ++ P + M +
Sbjct: 228 YDLIYTPNPTLFLKEAQQQGAIIIDGLEMLAQQGALALSIWIKQSVPVEIMSQ 280
>sp|B8D2C6|AROE_HALOH Shikimate dehydrogenase OS=Halothermothrix orenii (strain H 168 /
OCM 544 / DSM 9562) GN=aroE PE=3 SV=1
Length = 289
Score = 134 bits (336), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 95/288 (32%), Positives = 146/288 (50%), Gaps = 29/288 (10%)
Query: 237 TKIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLV--DDVKEFFRTYSGTDFAGFSV 294
T++ GL+ P+GHS P +HN A++ N +Y+P+ + D +KE +F G +V
Sbjct: 6 TQVVGLMGYPLGHSMSPAMHNRAYKDLGINYVYLPLEIKPDFLKEGIEGLRAFNFRGVNV 65
Query: 295 GIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALRERQG 354
IP+KE + DE+ LA IGAVNTI+ GKL GYNTD +ED
Sbjct: 66 TIPYKEKVIPYLDEIDRLAGEIGAVNTIVNN--GGKLKGYNTDALGFKKMLED------- 116
Query: 355 INGVASHTSPIAGKIFVLVGAGGAGRAL-AFGAKSRGARVIIFNRNYERAKALAD----- 408
+ I G V++GAGGA RA+ A A+ + + + NR ++A L
Sbjct: 117 -----DCSFEIKGTKAVIIGAGGASRAVGAVLAREGASEIFLLNRTLKKAAKLVGIWNKT 171
Query: 409 --AVSGEALHFEYLHEFFP--EKGMILANASAIGMEPNSDQSPV-PKEALKAYELVFDAV 463
+ AL + ++ P ++ ++ + + +GM P PV KEA+ LV D V
Sbjct: 172 YPGIKTVALPLDE-DKYLPVVKRCDVIIDTTPVGMAPGIKGGPVIAKEAITRDTLVVDLV 230
Query: 464 YTPRNTRLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMR 511
Y P T L++ +VGA ++G M I QA F+L+T G+ PE F++
Sbjct: 231 YNPPETTLIKAGRQVGARTMNGFPMLIYQAAYAFKLWT-GIKPELFIK 277
>sp|O26344|AROE_METTH Shikimate dehydrogenase OS=Methanothermobacter thermautotrophicus
(strain ATCC 29096 / DSM 1053 / JCM 10044 / NBRC 100330
/ Delta H) GN=aroE PE=3 SV=2
Length = 283
Score = 133 bits (335), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 100/288 (34%), Positives = 149/288 (51%), Gaps = 27/288 (9%)
Query: 233 INPDTKIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLV--DDVKEFFRTYSGTDFA 290
I T + G++ +P+GHS PI+HN AFR + IYVP V +++K
Sbjct: 2 ITGKTHVTGIMGHPLGHSLSPIMHNAAFRSLGMDWIYVPFPVKPENLKAAVEGLRALGVE 61
Query: 291 GFSVGIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALR 350
G +V IPHKE + D++H A IGAVNT+ + DG + GYNTD + A+E+
Sbjct: 62 GVNVTIPHKEAVLEYIDDIHGTAALIGAVNTL--KFDDGTVRGYNTDASGCLRALEE--- 116
Query: 351 ERQGINGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGAR-VIIFNRNYERAKALADA 409
+ + G +++GAGGA RA AF +GA + I NR E+A+ LA+
Sbjct: 117 -----------VTSVEGSSVLILGAGGAARACAFQLAEKGASDITILNRTPEKARLLAED 165
Query: 410 VSGEALHFEYLHEFFP------EKGMILANASAIGMEPNSDQSP-VPKEALKAYELVFDA 462
++ + L FE + + + IL + + +GM P++D P V E + +V D
Sbjct: 166 MA-DKLGFEASYGGYELIQGSVKSADILIDTTPVGMHPHTDDRPLVGAELMHEGLVVHDL 224
Query: 463 VYTPRNTRLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFM 510
VY P+ T LLREA A VSG+ M + Q + FR++TG P D M
Sbjct: 225 VYNPQRTVLLREAERASAIPVSGIRMLLYQGVEAFRIWTGRDPPLDVM 272
>sp|Q2S0A0|AROE_SALRD Shikimate dehydrogenase OS=Salinibacter ruber (strain DSM 13855 /
M31) GN=aroE PE=3 SV=1
Length = 285
Score = 132 bits (333), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 96/281 (34%), Positives = 141/281 (50%), Gaps = 26/281 (9%)
Query: 233 INPDTKIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYV--PMLVDDVKEFFRTYSGTDFA 290
++ T++ L+ +PV HS P +HN AFR N YV P+ + + + F
Sbjct: 3 LDATTQLVTLLGHPVEHSLSPRIHNTAFRAQDVNAAYVATPVRPEALGDAVAGLRALQFL 62
Query: 291 GFSVGIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALR 350
G +V PHKE + DEV A+++GAVNTI+R G+L G NTD + +E
Sbjct: 63 GANVTTPHKEAVLPVLDEVTERARAVGAVNTIVRD--GGRLHGDNTDIAGFLRPLE---- 116
Query: 351 ERQGINGVASHTSPIAGKIFVLVGAGGAGRALAFGAKS--RGARVIIFNRNYERAKALAD 408
ER G + G ++ GAGGA RA+ +G S R R+ I R ++A+ LA
Sbjct: 117 ERGG--------DALEGAPMLVFGAGGAARAVVYGLLSHYRPERLTIVARRPDQAEGLAA 168
Query: 409 AVSGE----ALHFEYLHE--FFPEKGMILANASAIGMEPNS-DQSPVPKEA-LKAYELVF 460
++ AL E ++ NA+ +GM P+ Q+P P A +V+
Sbjct: 169 DLAAHDPDGALRVSSFEEAALSVRTSRLVVNATPLGMAPDRRGQTPWPNPVDFTADHVVY 228
Query: 461 DAVYTPRNTRLLREAAEVGATVVSGVEMFIRQALGQFRLFT 501
D VYTP TRLLREAA GAT + G++M + QA +R +T
Sbjct: 229 DLVYTPEETRLLREAAAEGATPIGGLDMLVEQAAAAYRQWT 269
>sp|Q8THC3|AROE_METAC Shikimate dehydrogenase OS=Methanosarcina acetivorans (strain ATCC
35395 / DSM 2834 / JCM 12185 / C2A) GN=aroE PE=3 SV=1
Length = 280
Score = 132 bits (331), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 107/292 (36%), Positives = 149/292 (51%), Gaps = 27/292 (9%)
Query: 238 KIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLV--DDVKEFFRTYSGTDFAGFSVG 295
++FG+ +PVGHS P +HN AF + IY V +++++ F G ++
Sbjct: 3 RVFGVFGDPVGHSLSPAMHNSAFSALGMDCIYHAFRVRPENLRKAILGAEAMGFGGLNLT 62
Query: 296 IPHKEPAVACCDEVHP--LAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALRERQ 353
+P KE A+ D + P LA+ IGAVNT++ G++ GYNTD A A+ +A E
Sbjct: 63 VPLKEEALKL-DFIRPDPLAERIGAVNTVVFSET-GEIRGYNTDGLGARQALLEAAVE-- 118
Query: 354 GINGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGARVIIFNRNYERAKALADAVSGE 413
I G V+ GAGGA RA+AF + GA + + NR ERA LA V+
Sbjct: 119 -----------IRGSKVVVAGAGGAARAVAFQLAADGAEITVVNRTEERAVELAKDVAAA 167
Query: 414 AL-------HFEYLHEFFPEKGMILANASAIGMEPNSDQSPVPKEALKAYELVFDAVYTP 466
+L L E + IL N + +GM PN+D + E L + VFD VY P
Sbjct: 168 SLPGKINGTGLSGLKELLRDAD-ILINTTTLGMHPNTDTTIATAEELHSGLTVFDIVYNP 226
Query: 467 RNTRLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRKLVLEQF 518
TRLL+EA GA VSGV M + Q F+L+TG AP + M+K VLE
Sbjct: 227 LETRLLKEAKVAGAKTVSGVLMLVYQGAEAFKLWTGVEAPAELMKKTVLEAL 278
>sp|Q6LYQ2|AROE_METMP Shikimate dehydrogenase OS=Methanococcus maripaludis (strain S2 /
LL) GN=aroE PE=3 SV=1
Length = 278
Score = 132 bits (331), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 92/293 (31%), Positives = 154/293 (52%), Gaps = 25/293 (8%)
Query: 233 INPDTKIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLV--DDVKEFFRTYSGTDFA 290
IN TK+ GL+ +PV HS PI+HN A + + N Y V +++K+ +F
Sbjct: 2 INSKTKLVGLIGHPVDHSFSPIMHNAAIKDLKINYRYFAFDVSEENLKDVVAGAKAFNFR 61
Query: 291 GFSVGIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALR 350
GF++ IPHK + DE+ A++IGAVNT+ + +GK +GYNTD ++ AL
Sbjct: 62 GFNITIPHKMNIMKYLDEIDCDAEAIGAVNTV--KIENGKAIGYNTDG----IGVKKALE 115
Query: 351 ERQGINGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGARVIIFNRNYERAKALADAV 410
E+ GI + +G+GGA RA++F ++ + I NRN E+A+ L+ +
Sbjct: 116 EKTGILINKNILI---------IGSGGASRAVSFEL-AKDNNLTIVNRNIEKAENLSKEI 165
Query: 411 SGEALHFEYLH----EFFPEKGMILANASAIGMEPNSDQSPV-PKEALKAYELVFDAVYT 465
S + L+ + E I+ N + +GM P+++ PV P +K +V D +Y
Sbjct: 166 SRKLKKENPLNYGGLDINIENFDIIINTTPVGMYPHTEVEPVIPLNNIKKDAVVMDLIYN 225
Query: 466 PRNTRLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDF-MRKLVLEQ 517
P L+EA + GA ++G+ M + Q F ++T G+ P+ F M+K ++ +
Sbjct: 226 PLEPVFLKEAKKYGAKTINGIGMLVYQGAVSFEIWT-GIKPDIFVMKKSIISK 277
>sp|C5FQ73|ARO1_ARTOC Pentafunctional AROM polypeptide OS=Arthroderma otae (strain ATCC
MYA-4605 / CBS 113480) GN=MCYG_04845 PE=3 SV=1
Length = 1571
Score = 131 bits (330), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 133/521 (25%), Positives = 233/521 (44%), Gaps = 68/521 (13%)
Query: 22 EMQASIEQAKVEGADLVELCIDSME----------FSHISE-VDKLIQHPTLPAIVSYRL 70
++ A I +A G+D +EL +D ++ +++E + L H + P I + R
Sbjct: 1064 QLSADILRAATFGSDAIELRVDLLKDPSSTSGVPSVGYVAEQMSFLRSHASQPLIFTIRT 1123
Query: 71 KSSRKSSDEACKNTCLQVLRRALDLDVEFVEMDYEVASDPLMSEIIYSRSNTKIIVS--- 127
K+ + + L++ + A+ + EFV+++ +D L+ + + +KII S
Sbjct: 1124 KAQGGQFPDDAVDKALELYKLAIRMGSEFVDLELSFPND-LLHAVTEMKGFSKIIASHHD 1182
Query: 128 -----SYLNGGGKPTTEKL---GDVIACMQATGADVMKLEIAVDSITDLAPVFEMLTHCQ 179
S+ NG K GD+I + A + +A+ A
Sbjct: 1183 VNSQLSWSNGSWIQYYNKALQHGDIIKLIGV--AKTFEDNMALQQFKSWAE-----KSYP 1235
Query: 180 VPLIALAVGSRGLISQLLGPKFGGFLVYGSLGGKSVPGLPTLVSLKQVYQLEHINPDTKI 239
VP+IA+ +G++G +S++L +F + + +L K+ PG + ++Q L D K
Sbjct: 1236 VPIIAINMGNKGRLSRILN-RFMTPVSHPALPFKAAPGQVSAKDIRQALTLMG-ELDAKK 1293
Query: 240 FGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLVD---DVKEFFRTYSGTDFAGFSVGI 296
F L P+ S+ P LHN F F Y + D +V++F R+ DF G SV I
Sbjct: 1294 FALFGKPISASRSPALHNALFTQAGFPHDYGLLETDKAENVEKFIRS---DDFGGASVTI 1350
Query: 297 PHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDG---KLVGYNTDCESAISAIEDALRERQ 353
P KE + DE+ P AK IGAVNTI+ + G +L+GYNTD + ++DA
Sbjct: 1351 PLKEQIMGLLDEISPEAKIIGAVNTIVPITVSGRPPRLIGYNTDWQGMARCLKDA----- 1405
Query: 354 GINGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRG-ARVIIFNRNYERAKALADAVSG 412
+ S+ G+ + +G+GG RA + S G + + + R LA +
Sbjct: 1406 --GAICSNN----GESALTIGSGGTARAAIYSLHSMGYSPIYLVGRTPSNLSKLASSFPA 1459
Query: 413 EALHFEYLHEFFPEKGMILANASAIGMEPNSD--QSPVPKEALKAYE---------LVFD 461
E + + + + K + A AI P ++P+P+ + E ++ D
Sbjct: 1460 E-YNIQVVQDI---KSVQAAPKVAISTIPGDQELENPLPELITQIMEKGQDSSRECILLD 1515
Query: 462 AVYTPRNTRLLREAAEVGATVVSGVEMFIRQALGQFRLFTG 502
Y P T + R A+ G ++ G+E+ + Q + QF +TG
Sbjct: 1516 MAYKPDVTTMARLASPAGWKIIKGLEVLVAQGIYQFEHWTG 1556
>sp|Q8PXE6|AROE_METMA Shikimate dehydrogenase OS=Methanosarcina mazei (strain ATCC
BAA-159 / DSM 3647 / Goe1 / Go1 / JCM 11833 / OCM 88)
GN=aroE PE=3 SV=1
Length = 280
Score = 131 bits (330), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 109/290 (37%), Positives = 145/290 (50%), Gaps = 27/290 (9%)
Query: 238 KIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLV--DDVKEFFRTYSGTDFAGFSVG 295
++FG+ +PVGHS P +HN AF + IY V + +++ F G ++
Sbjct: 3 QVFGVFGDPVGHSLSPAMHNAAFSALGMDCIYHAFRVTPEKLEKAILGAEAMGFGGINLT 62
Query: 296 IPHKEPAVACCDEVHP--LAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALRERQ 353
+P KE A+ D V P LAK IGAVNT++ G + GYNTD A A+ D E
Sbjct: 63 VPLKEKALKL-DFVKPDPLAKRIGAVNTLVFGK-KGDIQGYNTDGPGAKQALLDTGVE-- 118
Query: 354 GINGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGARVIIFNRNYERAKALADAVSGE 413
I G V+ GAGGA RA+AF + GA + + NR ERA LA +S
Sbjct: 119 -----------IRGSRMVVAGAGGAARAVAFQLAADGADITVINRTEERAVGLAREISAA 167
Query: 414 AL-------HFEYLHEFFPEKGMILANASAIGMEPNSDQSPVPKEALKAYELVFDAVYTP 466
L L E + +L N + +GM PN+D + V E L + VFD VY P
Sbjct: 168 DLPGKIRGTGLSGLKELLRDAD-VLINTTTLGMHPNTDATIVTAEELHSGLTVFDIVYNP 226
Query: 467 RNTRLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRKLVLE 516
TRLLREA GA +SGV M + Q FRL+TG P + M+K VLE
Sbjct: 227 LETRLLREARTSGAKTISGVLMLVYQGAEAFRLWTGVEPPLELMKKTVLE 276
>sp|A9AB08|AROE_METM6 Shikimate dehydrogenase OS=Methanococcus maripaludis (strain C6 /
ATCC BAA-1332) GN=aroE PE=3 SV=1
Length = 279
Score = 131 bits (330), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 92/290 (31%), Positives = 150/290 (51%), Gaps = 25/290 (8%)
Query: 233 INPDTKIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLV--DDVKEFFRTYSGTDFA 290
I+ TK+ GL+ +PV HS PI+HN A + N Y+ V +++K A
Sbjct: 2 IDSKTKLIGLIGHPVEHSFSPIMHNAAIKDLGINYTYLAFDVSEENLKYIVSGAKALQIA 61
Query: 291 GFSVGIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALR 350
GF+V IPHK + DE+ AKSIGAVNT+ + +GK +GYNTD ++ AL
Sbjct: 62 GFNVTIPHKINIMKYLDEIDEDAKSIGAVNTV--KIENGKTIGYNTDG----IGVKRALE 115
Query: 351 ERQGINGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGARVIIFNRNYERAKALADAV 410
E+ GI + +G+GGA RA++F ++ + I NRN E+AK L++ +
Sbjct: 116 EKSGILINKNILI---------IGSGGASRAVSFEL-AKENNLTIVNRNIEKAKILSEEL 165
Query: 411 SGE-----ALHFEYLHEFFPEKGMILANASAIGMEPNSDQSPV-PKEALKAYELVFDAVY 464
S + ++ + L+ +I+ N + +GM P++D +PV P +K +V D +Y
Sbjct: 166 STKLKKENSIKYGALNIDIKNFDIII-NTTPVGMYPDTDVNPVIPLNDIKKSAVVMDLIY 224
Query: 465 TPRNTRLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRKLV 514
P L+EA + G ++G+ M + Q F+++TG M+K +
Sbjct: 225 NPLEPVFLKEAMKYGVETINGLGMLVYQGAVSFQIWTGKKPDVYVMKKAI 274
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.320 0.136 0.391
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 189,805,654
Number of Sequences: 539616
Number of extensions: 8309464
Number of successful extensions: 27569
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 578
Number of HSP's successfully gapped in prelim test: 365
Number of HSP's that attempted gapping in prelim test: 25197
Number of HSP's gapped (non-prelim): 1010
length of query: 518
length of database: 191,569,459
effective HSP length: 122
effective length of query: 396
effective length of database: 125,736,307
effective search space: 49791577572
effective search space used: 49791577572
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 64 (29.3 bits)