Query 010101
Match_columns 518
No_of_seqs 311 out of 2086
Neff 7.6
Searched_HMMs 46136
Date Thu Mar 28 21:03:56 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/010101.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/010101hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN02520 bifunctional 3-dehydr 100.0 1E-119 3E-124 975.7 56.9 508 4-516 18-528 (529)
2 PRK09310 aroDE bifunctional 3- 100.0 1E-104 3E-109 849.7 51.9 458 10-510 1-463 (477)
3 COG0169 AroE Shikimate 5-dehyd 100.0 9.9E-72 2.2E-76 552.8 31.9 271 233-517 2-280 (283)
4 PRK14027 quinate/shikimate deh 100.0 1.2E-70 2.7E-75 549.9 29.7 265 236-516 3-282 (283)
5 PRK12749 quinate/shikimate deh 100.0 4.2E-70 9E-75 547.8 31.8 266 233-514 3-284 (288)
6 PRK12549 shikimate 5-dehydroge 100.0 5.9E-70 1.3E-74 546.8 31.6 265 235-516 3-280 (284)
7 PRK12548 shikimate 5-dehydroge 100.0 1.2E-68 2.6E-73 539.6 30.5 267 233-515 5-288 (289)
8 PRK00258 aroE shikimate 5-dehy 100.0 5.4E-68 1.2E-72 532.6 32.0 270 233-517 1-275 (278)
9 PRK12550 shikimate 5-dehydroge 100.0 7E-68 1.5E-72 526.7 32.3 262 232-516 4-269 (272)
10 TIGR01809 Shik-DH-AROM shikima 100.0 3.8E-66 8.3E-71 519.3 30.1 263 236-514 4-282 (282)
11 TIGR00507 aroE shikimate 5-deh 100.0 8E-65 1.7E-69 507.8 31.2 264 238-516 1-267 (270)
12 PRK02412 aroD 3-dehydroquinate 100.0 1.3E-51 2.9E-56 407.1 24.9 227 4-232 11-250 (253)
13 COG0710 AroD 3-dehydroquinate 100.0 3.7E-51 8.1E-56 391.0 23.3 221 8-231 1-228 (231)
14 TIGR01093 aroD 3-dehydroquinat 100.0 1.5E-50 3.1E-55 394.7 22.0 214 10-228 1-228 (228)
15 PF01487 DHquinase_I: Type I 3 100.0 1.5E-50 3.3E-55 394.0 15.5 216 12-229 1-224 (224)
16 cd00502 DHQase_I Type I 3-dehy 100.0 1.3E-48 2.7E-53 380.6 23.6 214 10-229 1-224 (225)
17 PRK13575 3-dehydroquinate dehy 100.0 1.3E-48 2.9E-53 380.6 22.3 219 9-230 4-237 (238)
18 PRK13576 3-dehydroquinate dehy 100.0 9.9E-47 2.1E-51 360.6 19.8 203 7-231 1-206 (216)
19 PRK01261 aroD 3-dehydroquinate 100.0 2.2E-42 4.8E-47 333.8 21.9 203 5-231 17-226 (229)
20 KOG0692 Pentafunctional AROM p 100.0 3.2E-39 6.9E-44 327.3 -10.2 435 60-512 148-590 (595)
21 PF08501 Shikimate_dh_N: Shiki 99.9 2.9E-28 6.3E-33 199.7 7.3 81 242-322 1-83 (83)
22 PRK14192 bifunctional 5,10-met 99.9 7.8E-24 1.7E-28 211.6 18.5 214 240-498 38-279 (283)
23 cd01065 NAD_bind_Shikimate_DH 99.9 4.8E-23 1E-27 188.6 18.1 152 336-502 1-155 (155)
24 PF01488 Shikimate_DH: Shikima 99.6 4.3E-16 9.4E-21 139.7 8.3 97 364-468 9-113 (135)
25 cd05311 NAD_bind_2_malic_enz N 99.6 2E-15 4.4E-20 146.9 9.1 126 363-496 21-161 (226)
26 cd01078 NAD_bind_H4MPT_DH NADP 99.5 1.5E-13 3.3E-18 130.8 12.4 165 333-512 3-189 (194)
27 TIGR02853 spore_dpaA dipicolin 99.4 4.3E-13 9.4E-18 135.2 7.8 120 363-490 147-268 (287)
28 PRK08291 ectoine utilization p 99.3 1.2E-11 2.6E-16 127.4 12.6 151 314-488 96-254 (330)
29 TIGR02992 ectoine_eutC ectoine 99.3 6.2E-12 1.3E-16 129.3 10.1 130 314-467 93-229 (326)
30 COG0373 HemA Glutamyl-tRNA red 99.3 1.7E-11 3.7E-16 127.4 10.0 144 364-510 175-339 (414)
31 PRK13940 glutamyl-tRNA reducta 99.3 2.7E-11 5.9E-16 127.9 11.7 133 364-504 178-332 (414)
32 PRK08306 dipicolinate synthase 99.2 1.2E-11 2.6E-16 125.4 7.7 120 363-490 148-269 (296)
33 PRK00045 hemA glutamyl-tRNA re 99.2 2.3E-11 5E-16 129.4 6.2 189 298-504 113-339 (423)
34 PLN00203 glutamyl-tRNA reducta 98.8 2.2E-08 4.7E-13 108.5 10.9 133 364-504 263-428 (519)
35 TIGR01035 hemA glutamyl-tRNA r 98.8 2.9E-08 6.2E-13 105.6 10.7 134 364-505 177-337 (417)
36 PRK06141 ornithine cyclodeamin 98.6 1.6E-07 3.4E-12 96.3 10.0 114 366-487 124-244 (314)
37 COG1748 LYS9 Saccharopine dehy 98.6 1.2E-07 2.5E-12 98.6 8.4 125 368-498 2-142 (389)
38 PRK14175 bifunctional 5,10-met 98.6 2.7E-06 5.9E-11 85.2 17.7 199 257-499 54-280 (286)
39 cd05213 NAD_bind_Glutamyl_tRNA 98.5 9.5E-08 2.1E-12 97.8 6.0 97 365-468 176-277 (311)
40 cd01075 NAD_bind_Leu_Phe_Val_D 98.5 2.1E-06 4.5E-11 82.3 14.2 148 338-503 6-156 (200)
41 PRK14194 bifunctional 5,10-met 98.4 6.8E-06 1.5E-10 82.8 16.0 199 256-502 54-287 (301)
42 cd01080 NAD_bind_m-THF_DH_Cycl 98.4 1.1E-06 2.4E-11 81.7 9.3 79 363-466 40-119 (168)
43 PRK10792 bifunctional 5,10-met 98.4 1.7E-05 3.8E-10 79.3 16.8 196 256-501 54-283 (285)
44 TIGR00518 alaDH alanine dehydr 98.3 2.5E-06 5.4E-11 89.3 10.7 100 365-468 165-272 (370)
45 PRK08618 ornithine cyclodeamin 98.3 1.5E-06 3.4E-11 89.4 8.5 89 366-462 126-220 (325)
46 PRK07340 ornithine cyclodeamin 98.3 4.2E-06 9E-11 85.4 9.9 97 366-470 124-225 (304)
47 PRK14189 bifunctional 5,10-met 98.2 2.8E-05 6E-10 77.9 14.9 204 256-502 53-283 (285)
48 cd05191 NAD_bind_amino_acid_DH 98.2 1.3E-05 2.8E-10 65.9 10.5 79 338-462 3-85 (86)
49 PRK14179 bifunctional 5,10-met 98.2 3.4E-05 7.4E-10 77.2 15.2 197 257-502 54-283 (284)
50 PRK14982 acyl-ACP reductase; P 98.2 5.6E-06 1.2E-10 85.1 8.7 110 363-484 151-264 (340)
51 PLN02819 lysine-ketoglutarate 98.1 4.7E-06 1E-10 96.5 8.0 126 366-497 568-721 (1042)
52 PRK14176 bifunctional 5,10-met 98.1 4E-05 8.8E-10 76.7 13.5 168 256-466 59-239 (287)
53 PRK14190 bifunctional 5,10-met 98.1 0.00015 3.3E-09 72.6 17.1 203 257-503 54-284 (284)
54 PRK14191 bifunctional 5,10-met 98.1 0.00018 3.9E-09 72.0 17.2 200 256-498 52-278 (285)
55 PRK14188 bifunctional 5,10-met 98.1 2.3E-05 5E-10 79.1 10.8 157 257-466 54-233 (296)
56 PF03435 Saccharop_dh: Sacchar 98.1 1.8E-06 3.9E-11 91.0 2.8 123 370-498 1-141 (386)
57 PF00670 AdoHcyase_NAD: S-aden 98.1 5E-05 1.1E-09 69.6 11.5 97 363-471 19-118 (162)
58 PRK14182 bifunctional 5,10-met 98.0 0.00013 2.8E-09 72.9 15.3 197 257-501 52-281 (282)
59 PRK00676 hemA glutamyl-tRNA re 98.0 1.2E-05 2.5E-10 82.5 7.8 60 364-436 171-235 (338)
60 PRK14178 bifunctional 5,10-met 98.0 0.00033 7.1E-09 70.0 17.5 192 257-498 48-272 (279)
61 PF03807 F420_oxidored: NADP o 98.0 3.6E-06 7.9E-11 70.4 3.1 88 369-463 1-94 (96)
62 PRK14180 bifunctional 5,10-met 98.0 9.1E-05 2E-09 74.1 13.4 198 258-498 54-278 (282)
63 PRK14170 bifunctional 5,10-met 98.0 0.00028 6E-09 70.6 15.9 197 256-501 52-281 (284)
64 PLN02897 tetrahydrofolate dehy 98.0 0.00029 6.3E-09 72.0 16.0 197 257-501 108-344 (345)
65 PRK14168 bifunctional 5,10-met 97.9 0.00033 7.2E-09 70.6 15.9 203 256-502 54-296 (297)
66 PF03446 NAD_binding_2: NAD bi 97.9 6.7E-06 1.4E-10 76.1 3.4 111 368-484 2-117 (163)
67 COG2084 MmsB 3-hydroxyisobutyr 97.9 1.3E-05 2.8E-10 80.3 5.3 109 369-483 2-117 (286)
68 PRK14172 bifunctional 5,10-met 97.9 0.00018 3.9E-09 71.8 13.4 161 257-466 54-233 (278)
69 PRK14186 bifunctional 5,10-met 97.9 0.00048 1E-08 69.5 16.4 202 256-500 53-285 (297)
70 PRK14177 bifunctional 5,10-met 97.9 0.00016 3.4E-09 72.4 12.9 200 256-498 54-276 (284)
71 PRK14171 bifunctional 5,10-met 97.9 0.00022 4.7E-09 71.5 13.9 162 256-466 53-234 (288)
72 PLN02516 methylenetetrahydrofo 97.9 0.00038 8.2E-09 70.2 15.3 197 257-501 61-297 (299)
73 PLN02616 tetrahydrofolate dehy 97.9 0.00054 1.2E-08 70.4 16.4 198 257-502 125-362 (364)
74 PRK14166 bifunctional 5,10-met 97.9 0.00026 5.6E-09 70.8 13.5 166 258-466 53-232 (282)
75 PRK14184 bifunctional 5,10-met 97.9 0.00074 1.6E-08 67.7 16.7 194 257-499 53-282 (286)
76 PRK14173 bifunctional 5,10-met 97.9 0.00024 5.3E-09 71.2 13.3 162 257-466 51-230 (287)
77 PRK14169 bifunctional 5,10-met 97.8 0.00038 8.2E-09 69.7 14.1 200 255-498 50-277 (282)
78 PRK14183 bifunctional 5,10-met 97.8 0.00034 7.5E-09 69.9 13.6 168 256-466 52-232 (281)
79 COG0190 FolD 5,10-methylene-te 97.8 0.00074 1.6E-08 67.0 15.6 217 240-502 35-281 (283)
80 PRK14187 bifunctional 5,10-met 97.8 0.00029 6.3E-09 70.8 13.0 163 256-466 53-235 (294)
81 PRK14181 bifunctional 5,10-met 97.8 0.00076 1.6E-08 67.7 15.7 169 255-466 46-232 (287)
82 PRK06046 alanine dehydrogenase 97.8 0.00011 2.5E-09 75.6 9.5 113 367-487 129-248 (326)
83 TIGR00872 gnd_rel 6-phosphoglu 97.7 5.7E-05 1.2E-09 76.8 6.4 111 369-484 2-116 (298)
84 PRK14185 bifunctional 5,10-met 97.7 0.00047 1E-08 69.3 12.7 168 256-466 52-236 (293)
85 PRK14193 bifunctional 5,10-met 97.7 0.00055 1.2E-08 68.6 13.1 194 256-499 53-281 (284)
86 COG0287 TyrA Prephenate dehydr 97.7 4.5E-05 9.8E-10 76.6 5.0 117 368-489 4-125 (279)
87 PF02826 2-Hacid_dh_C: D-isome 97.7 0.0001 2.3E-09 69.1 6.8 110 363-480 32-145 (178)
88 PRK14174 bifunctional 5,10-met 97.7 0.0011 2.4E-08 66.9 14.5 163 256-466 52-238 (295)
89 PRK14167 bifunctional 5,10-met 97.6 0.00071 1.5E-08 68.2 13.0 206 255-504 51-293 (297)
90 COG0300 DltE Short-chain dehyd 97.6 0.00023 5E-09 70.6 9.1 78 365-442 4-99 (265)
91 PRK06823 ornithine cyclodeamin 97.6 0.00092 2E-08 68.5 13.6 95 367-468 128-228 (315)
92 KOG0409 Predicted dehydrogenas 97.6 0.00014 2.9E-09 72.3 7.0 113 366-484 34-153 (327)
93 cd05291 HicDH_like L-2-hydroxy 97.6 0.00016 3.5E-09 73.8 7.9 72 368-441 1-82 (306)
94 PRK00141 murD UDP-N-acetylmura 97.6 0.00047 1E-08 74.8 11.3 48 364-411 12-59 (473)
95 cd05212 NAD_bind_m-THF_DH_Cycl 97.6 0.00068 1.5E-08 61.0 10.3 79 363-466 24-103 (140)
96 TIGR02371 ala_DH_arch alanine 97.6 0.00037 7.9E-09 71.9 9.7 94 367-467 128-227 (325)
97 PTZ00075 Adenosylhomocysteinas 97.5 0.00051 1.1E-08 73.4 10.9 91 363-465 250-343 (476)
98 PRK09599 6-phosphogluconate de 97.5 0.00015 3.2E-09 73.9 6.7 111 369-484 2-117 (301)
99 PRK07502 cyclohexadienyl dehyd 97.5 0.00011 2.4E-09 75.1 5.6 117 367-489 6-127 (307)
100 PRK15461 NADH-dependent gamma- 97.5 0.0002 4.4E-09 72.8 7.5 107 369-481 3-115 (296)
101 TIGR01505 tartro_sem_red 2-hyd 97.5 0.00014 3.1E-09 73.6 6.2 111 369-485 1-117 (291)
102 PLN02928 oxidoreductase family 97.5 0.00023 5E-09 74.0 7.8 74 364-438 156-237 (347)
103 TIGR02356 adenyl_thiF thiazole 97.5 0.00015 3.3E-09 69.5 5.8 70 365-435 19-119 (202)
104 PRK06718 precorrin-2 dehydroge 97.5 0.00026 5.6E-09 67.9 7.2 71 363-436 6-79 (202)
105 PRK12490 6-phosphogluconate de 97.5 0.00019 4E-09 73.1 6.3 111 369-484 2-117 (299)
106 PF07991 IlvN: Acetohydroxy ac 97.5 0.00017 3.6E-09 65.9 5.0 69 365-437 2-70 (165)
107 PRK01438 murD UDP-N-acetylmura 97.4 0.0011 2.5E-08 71.9 12.4 98 363-489 12-112 (480)
108 PRK05476 S-adenosyl-L-homocyst 97.4 0.00037 8E-09 73.9 8.2 91 363-465 208-301 (425)
109 PRK08328 hypothetical protein; 97.4 0.00022 4.8E-09 69.9 6.1 112 365-485 25-149 (231)
110 PRK13243 glyoxylate reductase; 97.4 0.00033 7.3E-09 72.4 7.7 70 363-438 146-215 (333)
111 PF02423 OCD_Mu_crystall: Orni 97.4 0.00033 7.1E-09 71.8 7.6 96 367-468 128-230 (313)
112 PRK11559 garR tartronate semia 97.4 0.00029 6.3E-09 71.5 7.1 111 368-484 3-119 (296)
113 TIGR00561 pntA NAD(P) transhyd 97.4 0.00076 1.6E-08 73.0 10.6 99 365-467 162-288 (511)
114 PLN02350 phosphogluconate dehy 97.4 0.00017 3.7E-09 77.9 5.7 112 368-483 7-129 (493)
115 PRK08655 prephenate dehydrogen 97.4 8.5E-05 1.8E-09 79.6 3.3 113 369-488 2-118 (437)
116 PF02882 THF_DHG_CYH_C: Tetrah 97.4 0.0011 2.3E-08 61.1 10.0 110 363-498 32-158 (160)
117 PRK06407 ornithine cyclodeamin 97.4 0.00042 9.2E-09 70.6 8.1 94 367-467 117-217 (301)
118 PRK06199 ornithine cyclodeamin 97.4 0.00048 1E-08 72.3 7.9 90 367-459 155-255 (379)
119 PRK13302 putative L-aspartate 97.4 0.00053 1.2E-08 68.8 7.9 108 367-483 6-120 (271)
120 PRK03369 murD UDP-N-acetylmura 97.4 0.0011 2.4E-08 72.2 10.9 97 365-491 10-106 (488)
121 PRK07589 ornithine cyclodeamin 97.3 0.00079 1.7E-08 69.8 9.2 96 367-468 129-231 (346)
122 cd01076 NAD_bind_1_Glu_DH NAD( 97.3 0.0037 8.1E-08 61.0 13.4 135 338-490 11-163 (227)
123 cd01079 NAD_bind_m-THF_DH NAD 97.3 0.00049 1.1E-08 64.9 6.9 126 363-498 58-193 (197)
124 PRK14106 murD UDP-N-acetylmura 97.3 0.0014 3.1E-08 70.4 11.4 44 365-408 3-47 (450)
125 PRK08762 molybdopterin biosynt 97.3 0.00031 6.8E-09 73.9 5.4 71 365-436 133-234 (376)
126 PRK07417 arogenate dehydrogena 97.3 0.00023 5E-09 71.7 4.2 112 369-489 2-115 (279)
127 PLN02256 arogenate dehydrogena 97.3 0.00044 9.6E-09 70.5 6.0 117 366-489 35-154 (304)
128 PRK12475 thiamine/molybdopteri 97.2 0.00048 1E-08 71.3 6.3 71 364-435 21-124 (338)
129 cd00401 AdoHcyase S-adenosyl-L 97.2 0.00096 2.1E-08 70.6 8.5 69 363-436 198-266 (413)
130 PRK02472 murD UDP-N-acetylmura 97.2 0.0014 3E-08 70.4 9.8 38 365-402 3-40 (447)
131 TIGR00873 gnd 6-phosphoglucona 97.2 0.00038 8.1E-09 75.1 5.3 110 370-483 2-120 (467)
132 PRK09424 pntA NAD(P) transhydr 97.2 0.0012 2.6E-08 71.7 9.1 98 365-465 163-287 (509)
133 PRK05479 ketol-acid reductoiso 97.2 0.00068 1.5E-08 69.6 6.8 71 363-437 13-83 (330)
134 cd05211 NAD_bind_Glu_Leu_Phe_V 97.1 0.011 2.4E-07 57.4 13.8 149 338-501 3-165 (217)
135 PF01210 NAD_Gly3P_dh_N: NAD-d 97.1 0.00096 2.1E-08 61.3 6.1 69 369-438 1-80 (157)
136 KOG4230 C1-tetrahydrofolate sy 97.1 0.015 3.3E-07 62.3 15.4 185 243-469 42-242 (935)
137 PRK07679 pyrroline-5-carboxyla 97.1 0.00055 1.2E-08 69.0 4.8 128 368-501 4-136 (279)
138 PRK06719 precorrin-2 dehydroge 97.1 0.0012 2.6E-08 60.7 6.4 71 363-436 9-79 (157)
139 COG4221 Short-chain alcohol de 97.1 0.0017 3.6E-08 63.2 7.6 72 365-437 4-91 (246)
140 PRK08644 thiamine biosynthesis 97.1 0.00096 2.1E-08 64.5 6.0 71 364-435 25-125 (212)
141 COG2423 Predicted ornithine cy 97.1 0.0028 6.1E-08 65.1 9.6 113 367-487 130-251 (330)
142 PLN02494 adenosylhomocysteinas 97.1 0.0014 3E-08 69.9 7.7 69 363-436 250-318 (477)
143 PTZ00142 6-phosphogluconate de 97.1 0.00074 1.6E-08 72.8 5.7 112 369-483 3-123 (470)
144 PRK06476 pyrroline-5-carboxyla 97.1 0.001 2.2E-08 66.1 6.4 101 369-477 2-106 (258)
145 PRK13403 ketol-acid reductoiso 97.0 0.0011 2.5E-08 67.3 6.3 70 363-437 12-81 (335)
146 PRK07634 pyrroline-5-carboxyla 97.0 0.0015 3.2E-08 64.2 6.8 70 367-439 4-78 (245)
147 PRK13304 L-aspartate dehydroge 97.0 0.0013 2.8E-08 65.8 6.4 106 369-482 3-116 (265)
148 PRK05866 short chain dehydroge 97.0 0.002 4.4E-08 65.2 7.7 48 363-410 36-84 (293)
149 TIGR00936 ahcY adenosylhomocys 97.0 0.0017 3.7E-08 68.5 7.2 69 363-436 191-259 (406)
150 PF02737 3HCDH_N: 3-hydroxyacy 97.0 0.0018 3.9E-08 60.9 6.6 39 369-407 1-39 (180)
151 PRK06545 prephenate dehydrogen 97.0 0.00084 1.8E-08 70.2 4.7 117 368-489 1-122 (359)
152 PRK06436 glycerate dehydrogena 96.9 0.0021 4.6E-08 65.5 7.5 67 363-438 118-184 (303)
153 PRK07688 thiamine/molybdopteri 96.9 0.0014 3E-08 67.9 6.2 37 364-400 21-58 (339)
154 PRK05597 molybdopterin biosynt 96.9 0.0012 2.6E-08 68.9 5.7 71 364-435 25-126 (355)
155 PLN02712 arogenate dehydrogena 96.9 0.0014 3E-08 73.8 6.5 117 366-489 51-170 (667)
156 cd01487 E1_ThiF_like E1_ThiF_l 96.9 0.0017 3.7E-08 60.7 6.0 32 369-400 1-33 (174)
157 TIGR02354 thiF_fam2 thiamine b 96.9 0.0017 3.7E-08 62.2 6.1 36 364-399 18-54 (200)
158 PLN02712 arogenate dehydrogena 96.9 0.00082 1.8E-08 75.6 4.5 121 364-489 366-487 (667)
159 PRK05872 short chain dehydroge 96.9 0.0034 7.4E-08 63.6 8.1 49 363-411 5-54 (296)
160 PRK15438 erythronate-4-phospha 96.8 0.0048 1E-07 64.6 9.3 67 363-438 112-178 (378)
161 PRK09260 3-hydroxybutyryl-CoA 96.8 0.002 4.3E-08 65.2 6.3 41 368-408 2-42 (288)
162 PRK00421 murC UDP-N-acetylmura 96.8 0.0055 1.2E-07 66.2 10.1 97 365-492 5-103 (461)
163 TIGR01692 HIBADH 3-hydroxyisob 96.8 0.0015 3.3E-08 66.1 5.4 107 372-484 1-113 (288)
164 PRK12480 D-lactate dehydrogena 96.8 0.0023 5E-08 66.1 6.8 115 364-489 143-261 (330)
165 PF13241 NAD_binding_7: Putati 96.8 0.0025 5.4E-08 54.2 5.9 67 363-436 3-69 (103)
166 PRK12491 pyrroline-5-carboxyla 96.8 0.0023 5.1E-08 64.2 6.7 119 368-494 3-130 (272)
167 PRK00257 erythronate-4-phospha 96.8 0.004 8.6E-08 65.4 8.6 38 363-400 112-149 (381)
168 PRK15059 tartronate semialdehy 96.8 0.0021 4.4E-08 65.3 6.3 109 369-484 2-116 (292)
169 TIGR01470 cysG_Nterm siroheme 96.8 0.0026 5.7E-08 61.1 6.7 74 363-437 5-79 (205)
170 PRK08605 D-lactate dehydrogena 96.8 0.0019 4.2E-08 66.7 6.1 117 363-489 142-263 (332)
171 COG2085 Predicted dinucleotide 96.8 0.0021 4.6E-08 61.2 5.7 89 368-463 2-93 (211)
172 PRK14618 NAD(P)H-dependent gly 96.8 0.0027 5.9E-08 65.4 7.0 113 368-487 5-136 (328)
173 PRK05600 thiamine biosynthesis 96.8 0.0021 4.5E-08 67.4 5.9 71 365-436 39-140 (370)
174 PRK06200 2,3-dihydroxy-2,3-dih 96.8 0.005 1.1E-07 60.9 8.3 73 365-437 4-90 (263)
175 PRK15469 ghrA bifunctional gly 96.8 0.0011 2.4E-08 67.8 3.7 68 364-437 133-200 (312)
176 COG0345 ProC Pyrroline-5-carbo 96.8 0.0032 6.9E-08 62.7 6.8 67 368-437 2-72 (266)
177 PRK07060 short chain dehydroge 96.8 0.0053 1.1E-07 59.7 8.4 76 363-438 5-88 (245)
178 PF10727 Rossmann-like: Rossma 96.8 0.0012 2.5E-08 58.5 3.3 107 367-483 10-123 (127)
179 PRK08507 prephenate dehydrogen 96.7 0.0021 4.7E-08 64.5 5.6 111 369-488 2-115 (275)
180 PRK07574 formate dehydrogenase 96.7 0.0022 4.8E-08 67.4 5.6 71 363-437 188-258 (385)
181 COG0771 MurD UDP-N-acetylmuram 96.7 0.0061 1.3E-07 65.0 8.9 98 365-491 5-105 (448)
182 PRK08410 2-hydroxyacid dehydro 96.7 0.0044 9.4E-08 63.5 7.5 66 364-438 142-207 (311)
183 PRK06139 short chain dehydroge 96.7 0.0086 1.9E-07 61.8 9.7 47 364-410 4-51 (330)
184 PRK06057 short chain dehydroge 96.7 0.0054 1.2E-07 60.3 7.9 74 364-437 4-89 (255)
185 TIGR02355 moeB molybdopterin s 96.7 0.003 6.6E-08 62.2 5.9 35 365-399 22-57 (240)
186 PF00208 ELFV_dehydrog: Glutam 96.7 0.031 6.7E-07 55.2 13.0 139 338-488 11-172 (244)
187 PRK08818 prephenate dehydrogen 96.7 0.00093 2E-08 69.8 2.4 105 367-489 4-112 (370)
188 PRK06196 oxidoreductase; Provi 96.7 0.0068 1.5E-07 61.9 8.7 75 364-438 23-110 (315)
189 PRK07530 3-hydroxybutyryl-CoA 96.6 0.0041 8.9E-08 63.0 6.9 40 368-407 5-44 (292)
190 PRK08293 3-hydroxybutyryl-CoA 96.6 0.0051 1.1E-07 62.2 7.5 40 368-407 4-43 (287)
191 TIGR03325 BphB_TodD cis-2,3-di 96.6 0.0056 1.2E-07 60.5 7.7 47 365-411 3-50 (262)
192 PLN03139 formate dehydrogenase 96.6 0.0026 5.6E-08 66.9 5.4 71 363-437 195-265 (386)
193 PRK07825 short chain dehydroge 96.6 0.0068 1.5E-07 60.3 8.2 73 365-438 3-89 (273)
194 PF00056 Ldh_1_N: lactate/mala 96.6 0.011 2.3E-07 53.4 8.7 72 369-441 2-83 (141)
195 TIGR00465 ilvC ketol-acid redu 96.6 0.0039 8.5E-08 63.9 6.5 69 365-438 1-70 (314)
196 PRK05690 molybdopterin biosynt 96.6 0.0034 7.3E-08 62.1 5.8 36 364-399 29-65 (245)
197 TIGR01915 npdG NADPH-dependent 96.6 0.0044 9.6E-08 60.1 6.6 70 369-439 2-80 (219)
198 COG0686 Ald Alanine dehydrogen 96.6 0.0048 1E-07 61.8 6.7 98 365-465 166-270 (371)
199 PLN03209 translocon at the inn 96.6 0.0047 1E-07 67.7 7.2 45 366-410 79-124 (576)
200 PRK00094 gpsA NAD(P)H-dependen 96.6 0.0045 9.9E-08 63.4 6.9 90 369-463 3-105 (325)
201 cd00757 ThiF_MoeB_HesA_family 96.6 0.0032 6.9E-08 61.5 5.5 71 365-436 19-120 (228)
202 PRK15116 sulfur acceptor prote 96.6 0.0057 1.2E-07 61.1 7.2 36 364-399 27-63 (268)
203 PRK04308 murD UDP-N-acetylmura 96.6 0.011 2.5E-07 63.5 10.0 37 365-401 3-39 (445)
204 PRK11880 pyrroline-5-carboxyla 96.6 0.005 1.1E-07 61.4 6.7 68 368-438 3-73 (267)
205 PRK01710 murD UDP-N-acetylmura 96.5 0.012 2.6E-07 63.6 10.1 36 365-400 12-47 (458)
206 KOG0172 Lysine-ketoglutarate r 96.5 0.0016 3.5E-08 66.8 2.9 136 367-508 2-163 (445)
207 PRK13581 D-3-phosphoglycerate 96.5 0.0061 1.3E-07 67.0 7.6 69 364-438 137-205 (526)
208 COG0569 TrkA K+ transport syst 96.5 0.0067 1.5E-07 59.2 7.1 70 368-437 1-76 (225)
209 PRK06130 3-hydroxybutyryl-CoA 96.5 0.0064 1.4E-07 62.1 7.3 41 368-408 5-45 (311)
210 KOG1208 Dehydrogenases with di 96.5 0.0089 1.9E-07 61.2 8.2 79 363-441 31-128 (314)
211 cd00755 YgdL_like Family of ac 96.5 0.0048 1E-07 60.4 5.9 35 365-399 9-44 (231)
212 PRK08339 short chain dehydroge 96.5 0.0068 1.5E-07 60.2 7.2 47 364-410 5-52 (263)
213 PRK04690 murD UDP-N-acetylmura 96.5 0.013 2.9E-07 63.4 9.8 36 364-399 5-40 (468)
214 PRK15409 bifunctional glyoxyla 96.4 0.0077 1.7E-07 62.0 7.3 136 364-505 142-314 (323)
215 PRK11199 tyrA bifunctional cho 96.4 0.002 4.3E-08 67.7 3.0 101 367-489 98-200 (374)
216 PRK05854 short chain dehydroge 96.4 0.0081 1.8E-07 61.4 7.5 48 363-410 10-58 (313)
217 PRK08223 hypothetical protein; 96.4 0.0053 1.2E-07 61.7 5.9 36 364-399 24-60 (287)
218 KOG1200 Mitochondrial/plastidi 96.4 0.0086 1.9E-07 56.2 6.7 72 365-437 12-100 (256)
219 COG1052 LdhA Lactate dehydroge 96.4 0.0082 1.8E-07 61.7 7.4 138 363-506 142-318 (324)
220 PRK07819 3-hydroxybutyryl-CoA 96.4 0.0083 1.8E-07 60.7 7.3 38 368-405 6-43 (286)
221 TIGR01327 PGDH D-3-phosphoglyc 96.4 0.0093 2E-07 65.5 8.1 71 363-438 134-204 (525)
222 PRK01390 murD UDP-N-acetylmura 96.4 0.023 5E-07 61.4 11.0 99 365-491 7-105 (460)
223 PRK06129 3-hydroxyacyl-CoA deh 96.4 0.011 2.3E-07 60.5 7.9 39 368-406 3-41 (308)
224 KOG3007 Mu-crystallin [Amino a 96.3 0.019 4.2E-07 56.2 9.0 113 368-488 139-263 (333)
225 PRK07066 3-hydroxybutyryl-CoA 96.3 0.009 1.9E-07 61.4 7.2 39 368-406 8-46 (321)
226 COG1064 AdhP Zn-dependent alco 96.3 0.01 2.2E-07 61.0 7.4 69 366-436 166-238 (339)
227 PRK07523 gluconate 5-dehydroge 96.3 0.0092 2E-07 58.6 7.1 48 364-411 7-55 (255)
228 PRK06522 2-dehydropantoate 2-r 96.3 0.011 2.5E-07 59.7 7.9 66 369-437 2-76 (304)
229 KOG1201 Hydroxysteroid 17-beta 96.3 0.0074 1.6E-07 60.4 6.2 74 363-437 34-124 (300)
230 PRK07680 late competence prote 96.3 0.007 1.5E-07 60.7 6.1 117 369-493 2-126 (273)
231 PLN02688 pyrroline-5-carboxyla 96.3 0.0081 1.8E-07 59.8 6.5 65 369-437 2-71 (266)
232 PRK05867 short chain dehydroge 96.3 0.0095 2.1E-07 58.5 6.9 47 364-410 6-53 (253)
233 PRK06500 short chain dehydroge 96.3 0.013 2.8E-07 57.1 7.8 72 365-437 4-90 (249)
234 PRK08862 short chain dehydroge 96.3 0.0098 2.1E-07 57.9 6.8 46 365-410 3-49 (227)
235 PRK06035 3-hydroxyacyl-CoA deh 96.3 0.012 2.6E-07 59.6 7.6 39 368-406 4-42 (291)
236 PRK06487 glycerate dehydrogena 96.3 0.0095 2.1E-07 61.2 6.9 37 364-400 145-181 (317)
237 COG0673 MviM Predicted dehydro 96.3 0.025 5.4E-07 58.2 10.1 121 368-498 4-137 (342)
238 PRK06932 glycerate dehydrogena 96.3 0.0085 1.8E-07 61.5 6.5 37 364-400 144-180 (314)
239 cd00958 DhnA Class I fructose- 96.3 0.095 2.1E-06 51.2 13.7 153 17-185 20-185 (235)
240 COG1648 CysG Siroheme synthase 96.2 0.014 3.1E-07 56.2 7.5 73 363-436 8-81 (210)
241 COG0111 SerA Phosphoglycerate 96.2 0.01 2.3E-07 61.0 6.8 40 363-402 138-177 (324)
242 PLN02477 glutamate dehydrogena 96.2 0.055 1.2E-06 57.3 12.4 129 338-487 186-335 (410)
243 PRK08415 enoyl-(acyl carrier p 96.2 0.019 4.2E-07 57.5 8.7 72 365-437 3-93 (274)
244 PRK08159 enoyl-(acyl carrier p 96.2 0.02 4.4E-07 57.2 8.8 73 364-437 7-98 (272)
245 PRK07531 bifunctional 3-hydrox 96.2 0.011 2.4E-07 64.4 7.4 40 368-407 5-44 (495)
246 PLN02858 fructose-bisphosphate 96.2 0.0081 1.8E-07 72.8 6.8 106 367-479 4-116 (1378)
247 PRK08265 short chain dehydroge 96.2 0.012 2.7E-07 58.1 7.0 47 365-411 4-51 (261)
248 TIGR03026 NDP-sugDHase nucleot 96.2 0.025 5.4E-07 60.3 9.6 100 369-469 2-126 (411)
249 PRK07984 enoyl-(acyl carrier p 96.1 0.02 4.3E-07 57.0 8.4 35 365-399 4-41 (262)
250 PRK07063 short chain dehydroge 96.1 0.013 2.8E-07 57.7 7.0 48 364-411 4-52 (260)
251 PRK01368 murD UDP-N-acetylmura 96.1 0.023 5.1E-07 61.3 9.4 35 366-401 5-39 (454)
252 PRK00066 ldh L-lactate dehydro 96.1 0.017 3.6E-07 59.4 7.9 74 366-441 5-87 (315)
253 PRK07424 bifunctional sterol d 96.1 0.012 2.5E-07 62.6 6.9 74 364-438 175-256 (406)
254 PRK08085 gluconate 5-dehydroge 96.1 0.013 2.9E-07 57.4 6.9 48 364-411 6-54 (254)
255 PLN02858 fructose-bisphosphate 96.1 0.019 4E-07 69.8 9.3 111 367-483 324-442 (1378)
256 PRK12367 short chain dehydroge 96.1 0.01 2.2E-07 58.6 6.0 74 363-437 10-89 (245)
257 PRK14619 NAD(P)H-dependent gly 96.1 0.007 1.5E-07 61.8 5.0 35 367-401 4-38 (308)
258 PRK06182 short chain dehydroge 96.1 0.012 2.6E-07 58.5 6.6 71 367-438 3-85 (273)
259 PRK12829 short chain dehydroge 96.1 0.02 4.3E-07 56.3 8.1 48 364-411 8-56 (264)
260 COG0334 GdhA Glutamate dehydro 96.1 0.065 1.4E-06 56.1 12.0 135 363-506 203-364 (411)
261 KOG1014 17 beta-hydroxysteroid 96.1 0.011 2.3E-07 59.5 6.0 45 367-411 49-94 (312)
262 PLN02780 ketoreductase/ oxidor 96.1 0.012 2.6E-07 60.5 6.7 45 366-410 52-97 (320)
263 PRK12742 oxidoreductase; Provi 96.1 0.021 4.4E-07 55.3 8.0 73 365-437 4-85 (237)
264 cd04726 KGPDC_HPS 3-Keto-L-gul 96.1 0.2 4.3E-06 47.6 14.5 129 9-158 1-132 (202)
265 PRK07478 short chain dehydroge 96.1 0.015 3.3E-07 57.1 7.0 46 365-410 4-50 (254)
266 PLN02306 hydroxypyruvate reduc 96.1 0.015 3.3E-07 61.2 7.3 75 363-438 161-247 (386)
267 PRK05717 oxidoreductase; Valid 96.0 0.018 3.9E-07 56.6 7.4 49 363-411 6-55 (255)
268 PRK02006 murD UDP-N-acetylmura 96.0 0.037 8E-07 60.5 10.4 36 365-400 5-40 (498)
269 PRK06949 short chain dehydroge 96.0 0.019 4.2E-07 56.3 7.5 48 363-410 5-53 (258)
270 cd08230 glucose_DH Glucose deh 96.0 0.024 5.2E-07 58.8 8.5 70 366-436 172-247 (355)
271 PRK07231 fabG 3-ketoacyl-(acyl 96.0 0.017 3.6E-07 56.3 6.9 47 365-411 3-50 (251)
272 PRK09140 2-dehydro-3-deoxy-6-p 96.0 0.24 5.2E-06 47.6 14.6 145 10-186 11-158 (206)
273 PRK09414 glutamate dehydrogena 96.0 0.11 2.3E-06 55.7 13.2 133 337-487 211-368 (445)
274 PF01408 GFO_IDH_MocA: Oxidore 96.0 0.013 2.8E-07 50.7 5.3 106 369-484 2-118 (120)
275 KOG0725 Reductases with broad 96.0 0.017 3.8E-07 57.9 7.0 49 363-411 4-53 (270)
276 PRK09242 tropinone reductase; 96.0 0.018 3.9E-07 56.6 7.0 48 363-410 5-53 (257)
277 PLN02545 3-hydroxybutyryl-CoA 95.9 0.015 3.3E-07 58.9 6.6 38 368-405 5-42 (295)
278 PRK06124 gluconate 5-dehydroge 95.9 0.02 4.3E-07 56.2 7.2 48 363-410 7-55 (256)
279 PF13460 NAD_binding_10: NADH( 95.9 0.0068 1.5E-07 56.4 3.7 65 370-438 1-71 (183)
280 cd05313 NAD_bind_2_Glu_DH NAD( 95.9 0.055 1.2E-06 53.6 10.2 130 338-487 18-178 (254)
281 PRK07889 enoyl-(acyl carrier p 95.9 0.021 4.5E-07 56.5 7.4 74 365-438 5-96 (256)
282 PRK08277 D-mannonate oxidoredu 95.9 0.02 4.4E-07 57.0 7.4 47 364-410 7-54 (278)
283 PRK02705 murD UDP-N-acetylmura 95.9 0.048 1E-06 58.8 10.8 32 369-400 2-33 (459)
284 PRK09186 flagellin modificatio 95.9 0.018 3.9E-07 56.4 6.8 45 366-410 3-48 (256)
285 PRK06180 short chain dehydroge 95.9 0.03 6.6E-07 55.9 8.6 72 367-438 4-89 (277)
286 cd01483 E1_enzyme_family Super 95.9 0.022 4.8E-07 51.1 6.9 38 369-406 1-39 (143)
287 PRK08703 short chain dehydroge 95.9 0.019 4.1E-07 55.8 6.9 47 364-410 3-50 (239)
288 cd01492 Aos1_SUMO Ubiquitin ac 95.9 0.014 3.1E-07 55.7 5.8 35 365-399 19-54 (197)
289 PRK07062 short chain dehydroge 95.9 0.019 4.1E-07 56.7 7.0 47 364-410 5-52 (265)
290 PRK07774 short chain dehydroge 95.9 0.021 4.6E-07 55.7 7.1 46 365-410 4-50 (250)
291 PRK06125 short chain dehydroge 95.8 0.022 4.7E-07 56.2 7.1 47 364-410 4-51 (259)
292 PRK07890 short chain dehydroge 95.8 0.021 4.5E-07 56.0 6.9 47 365-411 3-50 (258)
293 PRK06172 short chain dehydroge 95.8 0.022 4.8E-07 55.8 7.0 47 364-410 4-51 (253)
294 PRK06603 enoyl-(acyl carrier p 95.8 0.033 7.2E-07 55.1 8.3 48 364-411 5-58 (260)
295 PRK09880 L-idonate 5-dehydroge 95.8 0.031 6.7E-07 57.7 8.4 92 366-464 169-267 (343)
296 PRK08589 short chain dehydroge 95.8 0.022 4.9E-07 56.7 7.0 45 365-410 4-49 (272)
297 PRK09291 short chain dehydroge 95.8 0.028 6E-07 55.1 7.6 71 367-437 2-83 (257)
298 PRK03803 murD UDP-N-acetylmura 95.8 0.05 1.1E-06 58.5 10.1 34 367-400 6-39 (448)
299 PTZ00079 NADP-specific glutama 95.8 0.24 5.3E-06 52.9 14.9 129 337-485 216-375 (454)
300 PRK07814 short chain dehydroge 95.8 0.024 5.2E-07 56.1 7.1 47 364-410 7-54 (263)
301 cd05292 LDH_2 A subgroup of L- 95.8 0.034 7.4E-07 56.9 8.3 71 369-441 2-81 (308)
302 PF02254 TrkA_N: TrkA-N domain 95.8 0.03 6.4E-07 48.1 6.8 66 370-436 1-71 (116)
303 PRK06484 short chain dehydroge 95.7 0.03 6.5E-07 61.3 8.2 74 364-437 266-353 (520)
304 PRK14030 glutamate dehydrogena 95.7 0.11 2.4E-06 55.5 12.0 130 337-486 207-367 (445)
305 PRK11064 wecC UDP-N-acetyl-D-m 95.7 0.054 1.2E-06 57.8 9.9 105 368-473 4-130 (415)
306 PRK06197 short chain dehydroge 95.7 0.023 5E-07 57.6 6.8 47 364-410 13-60 (306)
307 TIGR01832 kduD 2-deoxy-D-gluco 95.7 0.039 8.5E-07 53.7 8.1 36 365-400 3-39 (248)
308 PF00106 adh_short: short chai 95.7 0.03 6.5E-07 50.9 6.8 44 368-411 1-48 (167)
309 PRK07035 short chain dehydroge 95.7 0.029 6.2E-07 54.9 7.1 48 363-410 4-52 (252)
310 PRK07831 short chain dehydroge 95.7 0.029 6.3E-07 55.3 7.2 47 364-410 14-62 (262)
311 TIGR02279 PaaC-3OHAcCoADH 3-hy 95.7 0.018 3.9E-07 62.9 6.1 39 368-406 6-44 (503)
312 PRK07370 enoyl-(acyl carrier p 95.7 0.034 7.3E-07 55.0 7.6 35 365-399 4-41 (258)
313 PRK08690 enoyl-(acyl carrier p 95.7 0.031 6.7E-07 55.4 7.3 74 365-438 4-95 (261)
314 PRK06505 enoyl-(acyl carrier p 95.6 0.023 5E-07 56.8 6.3 74 365-438 5-96 (271)
315 PRK07109 short chain dehydroge 95.6 0.029 6.2E-07 58.0 7.2 47 364-410 5-52 (334)
316 PRK07067 sorbitol dehydrogenas 95.6 0.028 6.2E-07 55.2 6.8 47 365-411 4-51 (257)
317 PRK12921 2-dehydropantoate 2-r 95.6 0.026 5.7E-07 57.2 6.8 67 369-438 2-79 (305)
318 PRK05876 short chain dehydroge 95.6 0.029 6.2E-07 56.2 6.9 47 365-411 4-51 (275)
319 PRK12481 2-deoxy-D-gluconate 3 95.6 0.038 8.1E-07 54.4 7.6 37 364-400 5-42 (251)
320 PRK07097 gluconate 5-dehydroge 95.6 0.032 6.9E-07 55.2 7.2 48 363-410 6-54 (265)
321 PRK06194 hypothetical protein; 95.6 0.03 6.5E-07 56.0 7.0 46 365-410 4-50 (287)
322 PRK08268 3-hydroxy-acyl-CoA de 95.6 0.029 6.4E-07 61.3 7.3 39 368-406 8-46 (507)
323 PRK07453 protochlorophyllide o 95.6 0.031 6.6E-07 57.2 7.1 47 365-411 4-51 (322)
324 PRK07411 hypothetical protein; 95.6 0.017 3.8E-07 61.0 5.4 35 365-399 36-71 (390)
325 PLN00141 Tic62-NAD(P)-related 95.6 0.02 4.3E-07 56.4 5.5 74 364-438 14-96 (251)
326 PRK06720 hypothetical protein; 95.6 0.037 8E-07 51.5 7.0 47 364-410 13-60 (169)
327 PRK06484 short chain dehydroge 95.6 0.033 7.2E-07 60.9 7.8 71 366-437 4-89 (520)
328 PRK06997 enoyl-(acyl carrier p 95.5 0.04 8.7E-07 54.6 7.6 73 365-437 4-94 (260)
329 PRK07878 molybdopterin biosynt 95.5 0.018 3.9E-07 60.9 5.4 35 365-399 40-75 (392)
330 KOG0069 Glyoxylate/hydroxypyru 95.5 0.021 4.5E-07 58.5 5.6 118 363-488 158-279 (336)
331 PRK08217 fabG 3-ketoacyl-(acyl 95.5 0.034 7.3E-07 54.1 7.0 46 365-410 3-49 (253)
332 TIGR01082 murC UDP-N-acetylmur 95.5 0.061 1.3E-06 57.9 9.6 33 369-401 1-34 (448)
333 PRK09496 trkA potassium transp 95.5 0.035 7.6E-07 59.6 7.7 69 369-437 2-75 (453)
334 KOG0024 Sorbitol dehydrogenase 95.5 0.033 7.1E-07 56.4 6.7 73 366-439 169-254 (354)
335 PRK11790 D-3-phosphoglycerate 95.5 0.031 6.6E-07 59.5 7.0 38 363-400 147-184 (409)
336 PTZ00082 L-lactate dehydrogena 95.5 0.039 8.4E-07 56.8 7.5 74 366-441 5-88 (321)
337 PRK13394 3-hydroxybutyrate deh 95.5 0.035 7.7E-07 54.4 7.0 47 365-411 5-52 (262)
338 COG3268 Uncharacterized conser 95.5 0.027 6E-07 57.0 6.1 116 368-487 7-133 (382)
339 PRK07232 bifunctional malic en 95.5 0.066 1.4E-06 60.8 9.8 190 259-486 95-308 (752)
340 PLN02253 xanthoxin dehydrogena 95.5 0.036 7.8E-07 55.3 7.0 48 364-411 15-63 (280)
341 PRK06483 dihydromonapterin red 95.5 0.042 9.1E-07 53.2 7.3 39 367-405 2-41 (236)
342 TIGR03589 PseB UDP-N-acetylglu 95.4 0.037 8E-07 56.9 7.2 71 366-437 3-84 (324)
343 PRK09072 short chain dehydroge 95.4 0.039 8.4E-07 54.5 7.1 46 365-410 3-49 (263)
344 PRK06079 enoyl-(acyl carrier p 95.4 0.031 6.7E-07 55.1 6.4 46 364-410 4-52 (252)
345 PRK07576 short chain dehydroge 95.4 0.039 8.4E-07 54.7 7.1 47 364-410 6-53 (264)
346 PRK07677 short chain dehydroge 95.4 0.035 7.6E-07 54.4 6.7 44 367-410 1-45 (252)
347 PRK07533 enoyl-(acyl carrier p 95.4 0.039 8.5E-07 54.5 7.1 49 363-411 6-60 (258)
348 PRK06138 short chain dehydroge 95.4 0.037 8E-07 54.0 6.8 46 365-410 3-49 (252)
349 PRK07326 short chain dehydroge 95.4 0.038 8.3E-07 53.4 6.8 47 365-411 4-51 (237)
350 PRK08945 putative oxoacyl-(acy 95.4 0.038 8.1E-07 54.0 6.8 48 364-411 9-57 (247)
351 PRK08324 short chain dehydroge 95.4 0.032 6.9E-07 63.4 7.1 49 364-412 419-468 (681)
352 PRK14620 NAD(P)H-dependent gly 95.4 0.036 7.7E-07 57.0 6.8 41 369-409 2-42 (326)
353 PRK06935 2-deoxy-D-gluconate 3 95.4 0.036 7.9E-07 54.5 6.6 46 364-410 12-58 (258)
354 PRK05875 short chain dehydroge 95.3 0.042 9.1E-07 54.6 7.1 47 364-410 4-51 (276)
355 PRK05786 fabG 3-ketoacyl-(acyl 95.3 0.042 9E-07 53.1 6.9 46 365-410 3-49 (238)
356 PRK12939 short chain dehydroge 95.3 0.045 9.7E-07 53.2 7.1 46 365-410 5-51 (250)
357 PRK07454 short chain dehydroge 95.3 0.042 9.2E-07 53.3 6.9 45 366-410 5-50 (241)
358 PRK14806 bifunctional cyclohex 95.3 0.039 8.4E-07 63.3 7.6 114 368-489 4-125 (735)
359 PRK12828 short chain dehydroge 95.3 0.042 9.2E-07 52.9 6.7 46 365-410 5-51 (239)
360 PRK08643 acetoin reductase; Va 95.3 0.042 9.1E-07 53.9 6.7 45 367-411 2-47 (256)
361 PRK05808 3-hydroxybutyryl-CoA 95.2 0.039 8.4E-07 55.6 6.4 37 368-404 4-40 (282)
362 PRK08416 7-alpha-hydroxysteroi 95.2 0.044 9.6E-07 54.1 6.8 47 364-410 5-53 (260)
363 PRK05562 precorrin-2 dehydroge 95.2 0.047 1E-06 53.0 6.7 71 363-436 21-94 (223)
364 PRK07666 fabG 3-ketoacyl-(acyl 95.2 0.051 1.1E-06 52.7 7.1 46 365-410 5-51 (239)
365 PRK09496 trkA potassium transp 95.2 0.062 1.3E-06 57.7 8.4 72 365-436 229-306 (453)
366 PRK05993 short chain dehydroge 95.2 0.041 8.9E-07 54.9 6.6 42 367-408 4-46 (277)
367 PRK09287 6-phosphogluconate de 95.2 0.017 3.6E-07 62.3 3.8 102 378-483 1-111 (459)
368 PRK15057 UDP-glucose 6-dehydro 95.2 0.1 2.3E-06 55.1 9.8 99 369-469 2-123 (388)
369 COG0499 SAM1 S-adenosylhomocys 95.2 0.04 8.7E-07 56.3 6.2 69 363-436 205-273 (420)
370 PRK03806 murD UDP-N-acetylmura 95.2 0.11 2.3E-06 55.8 10.1 36 365-400 4-39 (438)
371 PRK08594 enoyl-(acyl carrier p 95.2 0.042 9.2E-07 54.3 6.4 47 364-410 4-56 (257)
372 TIGR03206 benzo_BadH 2-hydroxy 95.2 0.05 1.1E-06 53.0 6.9 45 366-410 2-47 (250)
373 PRK06113 7-alpha-hydroxysteroi 95.2 0.057 1.2E-06 53.0 7.3 48 363-410 7-55 (255)
374 PRK08213 gluconate 5-dehydroge 95.1 0.054 1.2E-06 53.3 7.1 47 364-410 9-56 (259)
375 PRK08251 short chain dehydroge 95.1 0.053 1.1E-06 52.8 6.9 44 367-410 2-46 (248)
376 cd07937 DRE_TIM_PC_TC_5S Pyruv 95.1 1.9 4.1E-05 43.3 18.2 200 27-230 27-246 (275)
377 PRK14031 glutamate dehydrogena 95.1 0.19 4.1E-06 53.8 11.4 130 337-486 207-366 (444)
378 PRK08263 short chain dehydroge 95.1 0.099 2.1E-06 52.0 9.0 72 367-438 3-88 (275)
379 PRK12826 3-ketoacyl-(acyl-carr 95.1 0.052 1.1E-06 52.7 6.8 46 365-410 4-50 (251)
380 TIGR01761 thiaz-red thiazoliny 95.1 0.15 3.3E-06 52.8 10.4 106 367-485 3-121 (343)
381 PRK06101 short chain dehydroge 95.1 0.05 1.1E-06 53.0 6.6 42 368-409 2-44 (240)
382 PRK05884 short chain dehydroge 95.1 0.052 1.1E-06 52.5 6.6 69 369-437 2-79 (223)
383 PRK14573 bifunctional D-alanyl 95.1 0.095 2.1E-06 60.8 9.8 94 368-492 5-100 (809)
384 PRK08267 short chain dehydroge 95.1 0.051 1.1E-06 53.5 6.6 44 368-411 2-46 (260)
385 PRK12429 3-hydroxybutyrate deh 95.1 0.058 1.3E-06 52.7 7.0 45 366-410 3-48 (258)
386 PRK07024 short chain dehydroge 95.1 0.052 1.1E-06 53.4 6.7 45 367-411 2-47 (257)
387 PF01118 Semialdhyde_dh: Semia 95.1 0.0065 1.4E-07 53.2 0.2 92 369-465 1-99 (121)
388 PRK08303 short chain dehydroge 95.1 0.046 1E-06 55.7 6.5 37 364-400 5-42 (305)
389 cd00300 LDH_like L-lactate deh 95.1 0.054 1.2E-06 55.2 6.9 69 370-440 1-79 (300)
390 COG0059 IlvC Ketol-acid reduct 95.0 0.039 8.5E-07 55.3 5.6 71 364-438 15-85 (338)
391 PRK07074 short chain dehydroge 95.0 0.057 1.2E-06 53.0 6.8 45 367-411 2-47 (257)
392 PRK06940 short chain dehydroge 95.0 0.051 1.1E-06 54.3 6.6 43 367-410 2-44 (275)
393 PRK08628 short chain dehydroge 95.0 0.052 1.1E-06 53.3 6.4 47 363-410 3-50 (258)
394 PRK04663 murD UDP-N-acetylmura 95.0 0.11 2.4E-06 55.7 9.4 35 366-400 5-42 (438)
395 TIGR03128 RuMP_HxlA 3-hexulose 95.0 0.81 1.8E-05 43.6 14.4 130 10-159 1-133 (206)
396 PRK08340 glucose-1-dehydrogena 94.9 0.058 1.2E-06 53.2 6.6 42 369-410 2-44 (259)
397 cd04740 DHOD_1B_like Dihydroor 94.9 0.98 2.1E-05 45.8 15.7 83 10-102 91-185 (296)
398 TIGR01289 LPOR light-dependent 94.9 0.064 1.4E-06 54.8 7.0 45 367-411 3-49 (314)
399 PRK07904 short chain dehydroge 94.9 0.053 1.2E-06 53.5 6.2 44 367-410 8-54 (253)
400 cd05293 LDH_1 A subgroup of L- 94.9 0.074 1.6E-06 54.5 7.4 69 368-438 4-82 (312)
401 KOG1207 Diacetyl reductase/L-x 94.9 0.063 1.4E-06 49.6 6.0 49 364-412 4-53 (245)
402 PRK05708 2-dehydropantoate 2-r 94.9 0.078 1.7E-06 54.1 7.5 42 368-409 3-44 (305)
403 PF00899 ThiF: ThiF family; I 94.9 0.033 7.2E-07 49.5 4.3 34 367-400 2-36 (135)
404 TIGR01087 murD UDP-N-acetylmur 94.9 0.098 2.1E-06 56.0 8.6 33 369-401 1-33 (433)
405 PRK06463 fabG 3-ketoacyl-(acyl 94.9 0.088 1.9E-06 51.7 7.7 45 364-408 4-50 (255)
406 PRK05653 fabG 3-ketoacyl-(acyl 94.9 0.071 1.5E-06 51.4 6.9 45 366-410 4-49 (246)
407 PRK06914 short chain dehydroge 94.8 0.069 1.5E-06 53.1 7.0 44 367-410 3-47 (280)
408 PRK12384 sorbitol-6-phosphate 94.8 0.071 1.5E-06 52.4 6.8 44 367-410 2-46 (259)
409 PLN02989 cinnamyl-alcohol dehy 94.8 0.055 1.2E-06 55.2 6.2 40 367-406 5-45 (325)
410 PRK07102 short chain dehydroge 94.8 0.07 1.5E-06 51.9 6.7 43 368-410 2-45 (243)
411 PF02558 ApbA: Ketopantoate re 94.8 0.061 1.3E-06 48.5 5.8 38 370-408 1-38 (151)
412 PRK12936 3-ketoacyl-(acyl-carr 94.8 0.078 1.7E-06 51.3 7.0 74 365-438 4-91 (245)
413 COG1179 Dinucleotide-utilizing 94.8 0.053 1.1E-06 52.7 5.5 34 365-398 28-62 (263)
414 PRK05565 fabG 3-ketoacyl-(acyl 94.7 0.076 1.6E-06 51.4 6.8 46 365-410 3-50 (247)
415 PLN02730 enoyl-[acyl-carrier-p 94.7 0.053 1.2E-06 55.3 5.8 47 363-410 5-54 (303)
416 KOG1205 Predicted dehydrogenas 94.7 0.054 1.2E-06 54.4 5.5 77 363-439 8-103 (282)
417 PRK08017 oxidoreductase; Provi 94.6 0.07 1.5E-06 52.2 6.3 40 368-407 3-43 (256)
418 PRK00043 thiE thiamine-phospha 94.6 1.5 3.2E-05 41.8 15.3 123 4-159 2-131 (212)
419 PRK14851 hypothetical protein; 94.6 0.052 1.1E-06 61.2 5.9 35 365-399 41-76 (679)
420 COG3967 DltE Short-chain dehyd 94.6 0.12 2.6E-06 49.2 7.3 73 365-437 3-88 (245)
421 PRK12331 oxaloacetate decarbox 94.6 3 6.5E-05 45.0 18.9 207 20-229 25-250 (448)
422 PRK12862 malic enzyme; Reviewe 94.6 0.25 5.5E-06 56.4 11.4 174 275-486 120-316 (763)
423 PRK06928 pyrroline-5-carboxyla 94.6 0.066 1.4E-06 53.9 6.1 122 369-495 3-131 (277)
424 PRK12823 benD 1,6-dihydroxycyc 94.6 0.083 1.8E-06 51.9 6.7 46 364-410 5-51 (260)
425 PRK06841 short chain dehydroge 94.6 0.086 1.9E-06 51.6 6.8 40 364-403 12-52 (255)
426 PRK07791 short chain dehydroge 94.6 0.078 1.7E-06 53.4 6.6 46 365-410 4-59 (286)
427 PRK10538 malonic semialdehyde 94.5 0.087 1.9E-06 51.5 6.7 70 369-438 2-85 (248)
428 TIGR01108 oadA oxaloacetate de 94.5 2.8 6E-05 46.7 19.0 208 19-230 19-246 (582)
429 PRK05579 bifunctional phosphop 94.5 0.19 4.1E-06 53.3 9.5 116 333-467 165-306 (399)
430 PRK07792 fabG 3-ketoacyl-(acyl 94.5 0.1 2.3E-06 53.0 7.3 48 363-410 8-57 (306)
431 PRK07806 short chain dehydroge 94.4 0.092 2E-06 51.1 6.6 46 365-410 4-51 (248)
432 PTZ00117 malate dehydrogenase; 94.4 0.1 2.2E-06 53.7 7.1 71 366-438 4-84 (319)
433 PRK05225 ketol-acid reductoiso 94.4 0.03 6.5E-07 59.4 3.2 71 364-438 33-108 (487)
434 PRK08261 fabG 3-ketoacyl-(acyl 94.4 0.12 2.7E-06 55.5 8.1 74 364-437 207-294 (450)
435 PRK06198 short chain dehydroge 94.4 0.094 2E-06 51.4 6.6 46 365-410 4-51 (260)
436 PRK08936 glucose-1-dehydrogena 94.4 0.11 2.4E-06 51.1 7.1 47 364-410 4-52 (261)
437 PRK06114 short chain dehydroge 94.4 0.11 2.4E-06 50.9 7.1 47 364-410 5-53 (254)
438 PRK07832 short chain dehydroge 94.4 0.097 2.1E-06 52.0 6.7 43 368-410 1-44 (272)
439 CHL00194 ycf39 Ycf39; Provisio 94.3 0.08 1.7E-06 54.1 6.1 66 369-436 2-73 (317)
440 TIGR01963 PHB_DH 3-hydroxybuty 94.3 0.099 2.2E-06 50.9 6.5 44 367-410 1-45 (255)
441 PRK06181 short chain dehydroge 94.3 0.11 2.3E-06 51.2 6.8 43 368-410 2-45 (263)
442 cd01484 E1-2_like Ubiquitin ac 94.3 0.09 2E-06 51.6 6.1 32 369-400 1-33 (234)
443 PLN02896 cinnamyl-alcohol dehy 94.3 0.12 2.5E-06 53.7 7.3 72 365-437 8-89 (353)
444 PRK08229 2-dehydropantoate 2-r 94.3 0.11 2.3E-06 53.7 7.0 92 368-467 3-111 (341)
445 cd01491 Ube1_repeat1 Ubiquitin 94.3 0.19 4.1E-06 50.8 8.4 36 365-400 17-53 (286)
446 COG0240 GpsA Glycerol-3-phosph 94.2 0.1 2.2E-06 53.4 6.4 70 368-438 2-82 (329)
447 COG5322 Predicted dehydrogenas 94.2 0.27 5.9E-06 48.5 9.0 110 363-485 163-281 (351)
448 PLN02986 cinnamyl-alcohol dehy 94.2 0.1 2.2E-06 53.3 6.5 41 366-406 4-45 (322)
449 cd05290 LDH_3 A subgroup of L- 94.2 0.11 2.5E-06 53.0 6.8 71 369-441 1-82 (307)
450 PF01262 AlaDh_PNT_C: Alanine 94.2 0.11 2.5E-06 48.0 6.2 97 364-465 17-141 (168)
451 PRK06398 aldose dehydrogenase; 94.2 0.069 1.5E-06 52.7 5.1 39 364-402 3-42 (258)
452 cd00650 LDH_MDH_like NAD-depen 94.1 0.094 2E-06 52.3 6.0 71 370-441 1-84 (263)
453 PRK06249 2-dehydropantoate 2-r 94.1 0.1 2.2E-06 53.4 6.4 35 367-401 5-39 (313)
454 PRK05599 hypothetical protein; 94.1 0.11 2.4E-06 50.9 6.4 42 368-410 1-43 (246)
455 PRK13303 L-aspartate dehydroge 94.1 0.082 1.8E-06 52.9 5.5 106 369-481 3-115 (265)
456 PRK12747 short chain dehydroge 94.1 0.13 2.8E-06 50.4 6.8 45 366-410 3-49 (252)
457 PRK08063 enoyl-(acyl carrier p 94.1 0.12 2.6E-06 50.3 6.5 45 366-410 3-49 (250)
458 TIGR02822 adh_fam_2 zinc-bindi 94.0 0.22 4.8E-06 51.2 8.7 69 366-438 165-234 (329)
459 PRK08264 short chain dehydroge 94.0 0.096 2.1E-06 50.6 5.7 41 365-405 4-46 (238)
460 PRK07856 short chain dehydroge 94.0 0.095 2.1E-06 51.3 5.7 39 364-402 3-42 (252)
461 PRK06223 malate dehydrogenase; 93.9 0.17 3.6E-06 51.6 7.6 72 368-441 3-84 (307)
462 cd02801 DUS_like_FMN Dihydrour 93.9 1.8 4E-05 41.8 14.5 86 10-102 56-157 (231)
463 TIGR02415 23BDH acetoin reduct 93.9 0.14 3E-06 50.0 6.7 43 368-410 1-44 (254)
464 PRK12746 short chain dehydroge 93.9 0.15 3.3E-06 49.8 6.8 46 365-410 4-51 (254)
465 PTZ00345 glycerol-3-phosphate 93.9 0.11 2.5E-06 54.3 6.2 71 367-438 11-104 (365)
466 PRK10637 cysG siroheme synthas 93.8 0.12 2.7E-06 55.8 6.7 71 363-436 8-81 (457)
467 PRK06523 short chain dehydroge 93.8 0.11 2.4E-06 51.1 5.8 39 364-402 6-45 (260)
468 cd00958 DhnA Class I fructose- 93.8 2.3 4.9E-05 41.5 15.0 139 12-158 65-213 (235)
469 PRK06924 short chain dehydroge 93.8 0.11 2.4E-06 50.7 5.7 43 368-410 2-46 (251)
470 PLN02602 lactate dehydrogenase 93.8 0.2 4.2E-06 52.2 7.8 69 368-438 38-116 (350)
471 PLN02586 probable cinnamyl alc 93.8 0.15 3.3E-06 53.2 7.0 70 366-436 183-256 (360)
472 PRK07201 short chain dehydroge 93.8 0.13 2.9E-06 57.8 7.1 47 364-410 368-415 (657)
473 PRK08642 fabG 3-ketoacyl-(acyl 93.8 0.14 3.1E-06 49.8 6.5 47 365-411 3-51 (253)
474 PRK05650 short chain dehydroge 93.8 0.14 3.1E-06 50.7 6.6 43 368-410 1-44 (270)
475 cd04729 NanE N-acetylmannosami 93.8 1.9 4.2E-05 41.6 14.3 137 1-158 4-149 (219)
476 PLN02214 cinnamoyl-CoA reducta 93.8 0.16 3.5E-06 52.6 7.1 38 365-402 8-46 (342)
477 cd08242 MDR_like Medium chain 93.8 0.27 6E-06 49.8 8.8 68 366-436 155-223 (319)
478 KOG1370 S-adenosylhomocysteine 93.7 0.14 3.1E-06 51.3 6.2 69 363-436 210-278 (434)
479 PRK08226 short chain dehydroge 93.7 0.15 3.3E-06 50.1 6.6 37 365-401 4-41 (263)
480 cd03174 DRE_TIM_metallolyase D 93.7 4.8 0.0001 39.7 17.4 198 19-231 17-245 (265)
481 PRK05855 short chain dehydroge 93.7 0.15 3.2E-06 56.2 7.1 47 364-410 312-359 (582)
482 KOG1209 1-Acyl dihydroxyaceton 93.7 0.21 4.5E-06 47.8 6.9 73 366-438 6-92 (289)
483 PRK08278 short chain dehydroge 93.6 0.14 3.1E-06 50.9 6.3 37 365-401 4-41 (273)
484 KOG2733 Uncharacterized membra 93.6 0.096 2.1E-06 53.6 4.9 112 369-484 7-142 (423)
485 COG1063 Tdh Threonine dehydrog 93.6 0.26 5.6E-06 51.4 8.4 69 367-436 169-247 (350)
486 PRK12439 NAD(P)H-dependent gly 93.6 0.14 3E-06 53.2 6.3 69 368-438 8-88 (341)
487 TIGR02632 RhaD_aldol-ADH rhamn 93.6 0.17 3.7E-06 57.5 7.5 48 363-410 410-458 (676)
488 PRK05693 short chain dehydroge 93.6 0.15 3.3E-06 50.6 6.4 41 368-408 2-43 (274)
489 PRK06482 short chain dehydroge 93.6 0.17 3.7E-06 50.2 6.8 71 368-438 3-87 (276)
490 cd01485 E1-1_like Ubiquitin ac 93.6 0.09 2E-06 50.2 4.5 36 365-400 17-53 (198)
491 PRK11730 fadB multifunctional 93.6 0.16 3.5E-06 58.0 7.3 38 368-405 314-351 (715)
492 PRK14041 oxaloacetate decarbox 93.6 5.1 0.00011 43.4 18.2 208 19-229 23-249 (467)
493 PLN02172 flavin-containing mon 93.5 0.49 1.1E-05 51.2 10.6 141 364-518 201-368 (461)
494 PRK06300 enoyl-(acyl carrier p 93.5 0.14 3.1E-06 52.1 6.0 36 363-398 4-42 (299)
495 PRK07775 short chain dehydroge 93.5 0.19 4.2E-06 50.0 6.9 46 365-410 8-54 (274)
496 PLN02662 cinnamyl-alcohol dehy 93.5 0.15 3.2E-06 51.8 6.2 37 367-403 4-41 (322)
497 COG1712 Predicted dinucleotide 93.5 0.2 4.2E-06 48.3 6.4 115 369-491 2-130 (255)
498 cd08293 PTGR2 Prostaglandin re 93.4 0.22 4.8E-06 51.1 7.5 70 367-436 155-233 (345)
499 cd05297 GH4_alpha_glucosidase_ 93.4 0.12 2.5E-06 55.4 5.5 72 369-441 2-88 (423)
500 cd05188 MDR Medium chain reduc 93.4 0.3 6.5E-06 47.6 8.1 94 366-465 134-234 (271)
No 1
>PLN02520 bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase
Probab=100.00 E-value=1.3e-119 Score=975.65 Aligned_cols=508 Identities=51% Similarity=0.859 Sum_probs=458.6
Q ss_pred cccCCceEEEeecCCCHHHHHHHHHHHHhhCCCEEEEEeccCC-CCcHHHHHHHhcCCCCcEEEEeecCCCCCCCCCCcH
Q 010101 4 AAKNSLLVCTQLECETTEEMQASIEQAKVEGADLVELCIDSME-FSHISEVDKLIQHPTLPAIVSYRLKSSRKSSDEACK 82 (518)
Q Consensus 4 ~~~~~~~icv~l~~~~~~~~~~~~~~~~~~g~D~vElRlD~l~-~~~~~~l~~l~~~~~~PiI~T~R~~~eGG~~~~~~~ 82 (518)
|++++|+||+||++++.++++.+++++...++|+||||+|+|. .+..+++..+++..++|+|||+|+++|||.|+++ +
T Consensus 18 ~~~~~~~icv~i~~~~~~e~~~~~~~~~~~~~D~vElRlD~l~~~~~~~~~~~~~~~~~~plI~T~R~~~eGG~~~~~-~ 96 (529)
T PLN02520 18 VRRNPTLICVPIMADSVDKMLIEMAKAKELGADLVEIRLDFLKNFNPREDLKTLIKQSPLPTLVTYRPKWEGGQYEGD-E 96 (529)
T ss_pred cccCCCEEEEEeCCCCHHHHHHHHHHhhhcCCCEEEEEeccccccCCHHHHHHHHhcCCCcEEEEeccHHHCCCCCCC-H
Confidence 7899999999999999999999988887789999999999998 4444567777777889999999999999999999 9
Q ss_pred HHHHHHHHHHhhcCCcEEEEecCCCCchhhHHHhhcCCCcEEEEeeecCCCCCCChhHHHHHHHHHHHcCCCEEEEEccc
Q 010101 83 NTCLQVLRRALDLDVEFVEMDYEVASDPLMSEIIYSRSNTKIIVSSYLNGGGKPTTEKLGDVIACMQATGADVMKLEIAV 162 (518)
Q Consensus 83 ~~~~~ll~~~~~~g~~yvDiEl~~~~~~~~~l~~~~~~~~kiI~S~H~f~~~tp~~~~l~~~~~~~~~~gadivKia~~~ 162 (518)
++|+++++.+++.|+||||||++..++..+.+...|+.++++|+||||| ++||+.++|.+++++|.++||||+|||+||
T Consensus 97 ~~~~~ll~~~~~~~~d~iDiEl~~~~~~~~~~~~~~~~~~~vI~S~H~f-~~tP~~~el~~~~~~~~~~gaDi~Kia~~~ 175 (529)
T PLN02520 97 NKRQDALRLAMELGADYVDVELKVAHEFINSISGKKPEKCKVIVSSHNY-ENTPSVEELGNLVARIQATGADIVKIATTA 175 (529)
T ss_pred HHHHHHHHHHHHhCCCEEEEEcCCchhHHHHHHhhhhcCCEEEEEecCC-CCCCCHHHHHHHHHHHHHhCCCEEEEecCC
Confidence 9999999999999999999999988766555544666799999999999 999999999999999999999999999999
Q ss_pred CCcccHHHHHHHhccCCCCEEEEecCCccchhhhcCCCCCCcccccccC--CCCCCCCCCHHHHHHHhhhccCCCCceEE
Q 010101 163 DSITDLAPVFEMLTHCQVPLIALAVGSRGLISQLLGPKFGGFLVYGSLG--GKSVPGLPTLVSLKQVYQLEHINPDTKIF 240 (518)
Q Consensus 163 ~~~~D~~~l~~~~~~~~~p~i~~~mG~~G~~sRi~~~~~gs~~ty~~~~--~~sApGQ~~~~~l~~~~~~~~~~~~t~~~ 240 (518)
++.+|++++++++.+.++|+|+|+||+.|++||+++++|||++||++++ .++||||+++++++++|++.+++++|++|
T Consensus 176 ~~~~D~~~ll~~~~~~~~p~i~~~MG~~G~~sRi~~~~~GS~lTy~~~~~~~~sAPGQ~~~~~l~~~~~~~~~~~~t~~~ 255 (529)
T PLN02520 176 LDITDVARMFQITVHSQVPTIGLVMGERGLISRILCPKFGGYLTFGTLEAGKVSAPGQPTIKDLLDLYNFRQIGPDTKVY 255 (529)
T ss_pred CCHHHHHHHHHHHhhcCCCEEEEecCCCCchheecccccCCceeeeecCcccccCCCCCCHHHHHHHhhhhcccCCceEE
Confidence 9999999999988777889999999999999999999999999999987 45999999999999999999999999999
Q ss_pred EEecCCCCcccCHHHHHHHHHHcCCCceEEecccCcHHHHHHHhcCCCCCEEEecccchHHHHhcccccChhhhhcCcee
Q 010101 241 GLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLVDDVKEFFRTYSGTDFAGFSVGIPHKEPAVACCDEVHPLAKSIGAVN 320 (518)
Q Consensus 241 ~liG~pi~hS~SP~~hn~~f~~~gl~~~y~~~~~~~l~~~~~~l~~~~~~G~~VT~P~K~~v~~~~d~~~~~A~~iGavN 320 (518)
||||+||+||+||.|||++|+++|+|+.|.++++++++++++.++.++|.|+|||||||+++++|+|++|+.|+.+||||
T Consensus 256 ~liG~Pi~hS~SP~ihn~~f~~~gl~~~Y~~~~v~~l~~~~~~l~~~~~~G~nVTiP~K~~v~~~lD~~~~~A~~iGAVN 335 (529)
T PLN02520 256 GIIGKPVGHSKSPILHNEAFKSVGFNGVYVHLLVDDLAKFLQTYSSPDFAGFSCTIPHKEDALKCCDEVDPIAKSIGAIN 335 (529)
T ss_pred EEEcCCcccccCHHHHHHHHHHCCCCcEEEEeehhhHHHHHHHHhhCCCCEEEECcCCHHHHHHHhccCCHHHHHhCCce
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEeccCCeEEEeecCHHHHHHHHHHHHHhhccCCCCCCCCcccCCcEEEEEccchhHHHHHHHHHHCCCeEEEEeCCH
Q 010101 321 TIIRRPIDGKLVGYNTDCESAISAIEDALRERQGINGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGARVIIFNRNY 400 (518)
Q Consensus 321 Ti~~~~~~g~l~G~NTD~~G~~~~l~~~l~~~~~~~~~~~~~~~l~~k~vlvlGaGg~araia~~L~~~G~~v~i~nRt~ 400 (518)
||++++++|+|+||||||.||+.+|++.+...+. .+.....+++|+++|+|+||+|++++++|++.|++|+++||+.
T Consensus 336 Tvv~~~~~g~l~G~NTD~~G~~~~l~~~~~~~~~---~~~~~~~~~~k~vlIlGaGGagrAia~~L~~~G~~V~i~nR~~ 412 (529)
T PLN02520 336 TIIRRPSDGKLVGYNTDYIGAISAIEDGLRASGS---SPASGSPLAGKLFVVIGAGGAGKALAYGAKEKGARVVIANRTY 412 (529)
T ss_pred EEEEeCCCCEEEEEcccHHHHHHHHHhhhccccc---ccccccCCCCCEEEEECCcHHHHHHHHHHHHCCCEEEEEcCCH
Confidence 9998622789999999999999999753321000 0000135778999999999999999999999999999999999
Q ss_pred HHHHHHHHHhcCcccccccccccCCCCccEEEEcCCCCCCCCCCCCCCChhhhcCCCEEEEEeeCCCchHHHHHHHHCCC
Q 010101 401 ERAKALADAVSGEALHFEYLHEFFPEKGMILANASAIGMEPNSDQSPVPKEALKAYELVFDAVYTPRNTRLLREAAEVGA 480 (518)
Q Consensus 401 ~ka~~la~~~~~~~~~~~~l~~~~~~~~divInatp~g~~~~~~~~~~~~~~l~~~~~v~Di~Y~P~~T~ll~~A~~~G~ 480 (518)
++++++++.++...+.++++.+.....+|+||||||+||.|..+..|++..++++..+|+|++|+|.+|+|+++|+++||
T Consensus 413 e~a~~la~~l~~~~~~~~~~~~~~~~~~diiINtT~vGm~~~~~~~pl~~~~l~~~~~v~D~vY~P~~T~ll~~A~~~G~ 492 (529)
T PLN02520 413 ERAKELADAVGGQALTLADLENFHPEEGMILANTTSVGMQPNVDETPISKHALKHYSLVFDAVYTPKITRLLREAEESGA 492 (529)
T ss_pred HHHHHHHHHhCCceeeHhHhhhhccccCeEEEecccCCCCCCCCCCcccHhhCCCCCEEEEeccCCCcCHHHHHHHHCCC
Confidence 99999999886555555554331234579999999999998777778888889999999999999999999999999999
Q ss_pred eeeccHHHHHHHHHHHHHHhcCCCCCHHHHHHHHHh
Q 010101 481 TVVSGVEMFIRQALGQFRLFTGGLAPEDFMRKLVLE 516 (518)
Q Consensus 481 ~~i~G~~ml~~Qa~~qf~lw~g~~~p~~~~~~~~~~ 516 (518)
++++|++||++||+.||++|||.++|.+.|++++.+
T Consensus 493 ~~~~Gl~MLv~Qa~~~f~lwtg~~~~~~~~~~~l~~ 528 (529)
T PLN02520 493 IIVSGTEMFIRQAYEQFERFTGLPAPKELFREIMSK 528 (529)
T ss_pred eEeCcHHHHHHHHHHHHHHHhCCCCCHHHHHHHHhh
Confidence 999999999999999999999999999999986643
No 2
>PRK09310 aroDE bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase protein; Reviewed
Probab=100.00 E-value=1.4e-104 Score=849.67 Aligned_cols=458 Identities=28% Similarity=0.445 Sum_probs=410.1
Q ss_pred eEEEeecCCCHHHHHHHHHHHHhhCCCEEEEEeccCC-CCcHHHHHHHhcCCCCcEEEEeecCCCCCCCCCCcHHHHHHH
Q 010101 10 LVCTQLECETTEEMQASIEQAKVEGADLVELCIDSME-FSHISEVDKLIQHPTLPAIVSYRLKSSRKSSDEACKNTCLQV 88 (518)
Q Consensus 10 ~icv~l~~~~~~~~~~~~~~~~~~g~D~vElRlD~l~-~~~~~~l~~l~~~~~~PiI~T~R~~~eGG~~~~~~~~~~~~l 88 (518)
|||+||++++.+|++++++.+. .++|+||||+|+|. .+.. .+..+++..+.|++ |+|+.++ ++ +++|+++
T Consensus 1 ~icv~i~~~~~~e~~~~~~~~~-~~~D~vE~R~D~~~~~~~~-~~~~l~~~~~~pil-T~R~~~~-----~~-~~~~~~~ 71 (477)
T PRK09310 1 MLCATISGPSFLEAKQQILRSL-KLVDCIELRVDLLLSLSDL-ELKKLIELAPIPIL-TWKKHES-----CS-QAAWIDK 71 (477)
T ss_pred CEEEEecCCCHHHHHHHHHHhc-ccCCEEEEEehhhccCCHH-HHHHHHhcCCCceE-EeccCcc-----CC-HHHHHHH
Confidence 6999999999999999998876 78999999999998 4433 36777765566766 9999874 46 8999999
Q ss_pred HHHHhhcCCcEEEEecCCCCchhhHHHhhcCCCcEEEEeeecCCCCCCChhHHHHHHHHHHHcCCCEEEEEcccCCcccH
Q 010101 89 LRRALDLDVEFVEMDYEVASDPLMSEIIYSRSNTKIIVSSYLNGGGKPTTEKLGDVIACMQATGADVMKLEIAVDSITDL 168 (518)
Q Consensus 89 l~~~~~~g~~yvDiEl~~~~~~~~~l~~~~~~~~kiI~S~H~f~~~tp~~~~l~~~~~~~~~~gadivKia~~~~~~~D~ 168 (518)
++.++++|+||||||++.+++.++++...+ +++|+|+||||| + .+++.+++++|.++||||+|||+||++.+|+
T Consensus 72 l~~~~~~~~d~vDiEl~~~~~~~~~l~~~~-~~~kvI~S~Hdf-~----~~~l~~~~~~~~~~gaDi~Kia~~a~~~~D~ 145 (477)
T PRK09310 72 MQSLAKLNPNYLDIDKDFPKEALIRIRKLH-PKIKIILSYHTS-E----HEDIIQLYNEMLASAADYYKIAVSSSSSTDL 145 (477)
T ss_pred HHHHHHhCCCEEEEEecCCHHHHHHHHHhC-CCCEEEEEcCCC-C----cchHHHHHHHHHHcCCCEEEEeeCCCCHHHH
Confidence 999999999999999999888887775443 599999999999 3 3689999999999999999999999999999
Q ss_pred HHHHHHhccCCCCEEEEecCCccchhhhcCCCCCCcccccccCC--CCCCCCCCHHHHHHHhhhccCCCCceEEEEecCC
Q 010101 169 APVFEMLTHCQVPLIALAVGSRGLISQLLGPKFGGFLVYGSLGG--KSVPGLPTLVSLKQVYQLEHINPDTKIFGLVSNP 246 (518)
Q Consensus 169 ~~l~~~~~~~~~p~i~~~mG~~G~~sRi~~~~~gs~~ty~~~~~--~sApGQ~~~~~l~~~~~~~~~~~~t~~~~liG~p 246 (518)
+++++++.....|+|+|+||+.|++||+++++|||++||+++.. ++||||++++++. .|++.+++++|++|||+|+|
T Consensus 146 l~ll~~~~~~~~p~i~i~MG~~G~~SRil~~~~gS~~Tfa~~~~~~~~APGQi~~~~l~-~~~~~~~~~~t~~~~liG~p 224 (477)
T PRK09310 146 LNIIHQKRSLPENTTVLCMGGMGRPSRILSPLLQNAFNYAAGIGAPPVAPGQLSLEHLL-FYNYANLSAQSPIYGLIGDP 224 (477)
T ss_pred HHHHHHHhhCCCCEEEEEeCCCchHHhhcchhhcCccccccccCccccCCCCcCHHHHH-hcchhccCCCceEEEEECCC
Confidence 99999988888899999999999999999999999999999865 4799999999998 57899999899999999999
Q ss_pred CCcccCHHHHHHHHHHcCCCceEEecccC--cHHHHHHHhcCCCCCEEEecccchHHHHhcccccChhhhhcCceeEEEE
Q 010101 247 VGHSKGPILHNPAFRHTRFNGIYVPMLVD--DVKEFFRTYSGTDFAGFSVGIPHKEPAVACCDEVHPLAKSIGAVNTIIR 324 (518)
Q Consensus 247 i~hS~SP~~hn~~f~~~gl~~~y~~~~~~--~l~~~~~~l~~~~~~G~~VT~P~K~~v~~~~d~~~~~A~~iGavNTi~~ 324 (518)
|+||+||.|||++|+++|+|++|.+++++ +++++++.++.++|.|+|||||||++|++|+|++|+.|+.+||||||++
T Consensus 225 i~hS~SP~~hn~~f~~~gl~~~Y~~~~v~~~~l~~~~~~~~~~~~~G~nVT~P~K~~v~~~~d~~~~~A~~iGAVNTv~~ 304 (477)
T PRK09310 225 VDRSISHLSHNPLFSQLSLNCPYIKLPLTPQELPKFFSTIRDLPFLGLSVTMPLKTAVLDFLDKLDPSVKLCGSCNTLVF 304 (477)
T ss_pred cccccCHHHHHHHHHHcCCCcEEEEeecCHHHHHHHHHHHHhCCCCEEEECccCHHHHHHHhccCCHHHHHhCcceEEEe
Confidence 99999999999999999999999999984 7999999999999999999999999999999999999999999999998
Q ss_pred eccCCeEEEeecCHHHHHHHHHHHHHhhccCCCCCCCCcccCCcEEEEEccchhHHHHHHHHHHCCCeEEEEeCCHHHHH
Q 010101 325 RPIDGKLVGYNTDCESAISAIEDALRERQGINGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGARVIIFNRNYERAK 404 (518)
Q Consensus 325 ~~~~g~l~G~NTD~~G~~~~l~~~l~~~~~~~~~~~~~~~l~~k~vlvlGaGg~araia~~L~~~G~~v~i~nRt~~ka~ 404 (518)
+ +|+|+||||||.||+.+|++. + ..+++++++|+|+||+|+++++.|.+.|++|+++||+.++++
T Consensus 305 ~--~g~l~G~NTD~~G~~~~l~~~-----~--------~~~~~k~vlIiGaGgiG~aia~~L~~~G~~V~i~~R~~~~~~ 369 (477)
T PRK09310 305 R--NGKIEGYNTDGEGLFSLLKQK-----N--------IPLNNQHVAIVGAGGAAKAIATTLARAGAELLIFNRTKAHAE 369 (477)
T ss_pred e--CCEEEEEecCHHHHHHHHHhc-----C--------CCcCCCEEEEEcCcHHHHHHHHHHHHCCCEEEEEeCCHHHHH
Confidence 7 899999999999999998641 2 456789999999999999999999999999999999999999
Q ss_pred HHHHHhcCcccccccccccCCCCccEEEEcCCCCCCCCCCCCCCChhhhcCCCEEEEEeeCCCchHHHHHHHHCCCeeec
Q 010101 405 ALADAVSGEALHFEYLHEFFPEKGMILANASAIGMEPNSDQSPVPKEALKAYELVFDAVYTPRNTRLLREAAEVGATVVS 484 (518)
Q Consensus 405 ~la~~~~~~~~~~~~l~~~~~~~~divInatp~g~~~~~~~~~~~~~~l~~~~~v~Di~Y~P~~T~ll~~A~~~G~~~i~ 484 (518)
++++.++....+++++.. ..++|+||||||.||. ++. .+. .+|+|++|+|.+|+|+++|+++||++++
T Consensus 370 ~la~~~~~~~~~~~~~~~--l~~~DiVInatP~g~~-------~~~-~l~--~~v~D~~Y~P~~T~ll~~A~~~G~~~~~ 437 (477)
T PRK09310 370 ALASRCQGKAFPLESLPE--LHRIDIIINCLPPSVT-------IPK-AFP--PCVVDINTLPKHSPYTQYARSQGSSIIY 437 (477)
T ss_pred HHHHHhccceechhHhcc--cCCCCEEEEcCCCCCc-------chh-HHh--hhEEeccCCCCCCHHHHHHHHCcCEEEC
Confidence 999887654445555432 3578999999999972 222 233 3899999999999999999999999999
Q ss_pred cHHHHHHHHHHHHHHhcCCCCCHHHH
Q 010101 485 GVEMFIRQALGQFRLFTGGLAPEDFM 510 (518)
Q Consensus 485 G~~ml~~Qa~~qf~lw~g~~~p~~~~ 510 (518)
|++||++||+.||++|||.+.+.+..
T Consensus 438 G~~Ml~~Qa~~~f~lw~g~~~~~~~~ 463 (477)
T PRK09310 438 GYEMFAEQALLQFRLWFPTLLFKHLE 463 (477)
T ss_pred cHHHHHHHHHHHHHHHcCCcccHHHH
Confidence 99999999999999999999987653
No 3
>COG0169 AroE Shikimate 5-dehydrogenase [Amino acid transport and metabolism]
Probab=100.00 E-value=9.9e-72 Score=552.78 Aligned_cols=271 Identities=40% Similarity=0.630 Sum_probs=243.0
Q ss_pred CCCCceEEEEecCCCCcccCHHHHHHHHHHcCCCceEEecccC--cHHHHHHHhcCCCCCEEEecccchHHHHhcccccC
Q 010101 233 INPDTKIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLVD--DVKEFFRTYSGTDFAGFSVGIPHKEPAVACCDEVH 310 (518)
Q Consensus 233 ~~~~t~~~~liG~pi~hS~SP~~hn~~f~~~gl~~~y~~~~~~--~l~~~~~~l~~~~~~G~~VT~P~K~~v~~~~d~~~ 310 (518)
++..|++|+|||+||+||+||.|||++|+++|+|+.|.+++++ +++++++.++.+++.|+|||||||+++++|+|++|
T Consensus 2 ~~~~t~~~~viG~Pi~HS~SP~~Hn~~~~~lGl~~~Y~a~~v~~~~l~~~v~~~~~~g~~G~NVTiP~Ke~~~~~lD~l~ 81 (283)
T COG0169 2 MNGKTKLFGVIGNPISHSLSPRMHNAAFRALGLDYVYLAFEVPPEDLPEAVSGIRALGFRGLNVTIPFKEAALPLLDELS 81 (283)
T ss_pred CCCCceEEEEEcCCcccCcCHHHHHHHHHHcCCCceEEEeecCHHHHHHHHHHHHhcCCCeeEECCccHHHHHHHHhcCC
Confidence 4667899999999999999999999999999999999999995 99999999999999999999999999999999999
Q ss_pred hhhhhcCceeEEEEeccCCeEEEeecCHHHHHHHHHHHHHhhccCCCCCCCCcccCCcEEEEEccchhHHHHHHHHHHCC
Q 010101 311 PLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALRERQGINGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRG 390 (518)
Q Consensus 311 ~~A~~iGavNTi~~~~~~g~l~G~NTD~~G~~~~l~~~l~~~~~~~~~~~~~~~l~~k~vlvlGaGg~araia~~L~~~G 390 (518)
+.|+.+||||||+++. +|+|+||||||.||.++|++... ....++++++|+||||+|||++++|++.|
T Consensus 82 ~~A~~iGAVNTl~~~~-~g~l~G~NTD~~G~~~~L~~~~~-----------~~~~~~~~vlilGAGGAarAv~~aL~~~g 149 (283)
T COG0169 82 PRARLIGAVNTLVRED-DGKLRGYNTDGIGFLRALKEFGL-----------PVDVTGKRVLILGAGGAARAVAFALAEAG 149 (283)
T ss_pred HHHHHhCCceEEEEcc-CCEEEEEcCCHHHHHHHHHhcCC-----------CcccCCCEEEEECCcHHHHHHHHHHHHcC
Confidence 9999999999999982 49999999999999999875210 13456899999999999999999999999
Q ss_pred C-eEEEEeCCHHHHHHHHHHhcCcc-----cccccccccCCCCccEEEEcCCCCCCCCCCCCCCChhhhcCCCEEEEEee
Q 010101 391 A-RVIIFNRNYERAKALADAVSGEA-----LHFEYLHEFFPEKGMILANASAIGMEPNSDQSPVPKEALKAYELVFDAVY 464 (518)
Q Consensus 391 ~-~v~i~nRt~~ka~~la~~~~~~~-----~~~~~l~~~~~~~~divInatp~g~~~~~~~~~~~~~~l~~~~~v~Di~Y 464 (518)
+ +|+|+|||.+|+++|++.++... ..+.++.. ..++|+||||||+||.+..+..+++.+.+++..+|+|++|
T Consensus 150 ~~~i~V~NRt~~ra~~La~~~~~~~~~~~~~~~~~~~~--~~~~dliINaTp~Gm~~~~~~~~~~~~~l~~~~~v~D~vY 227 (283)
T COG0169 150 AKRITVVNRTRERAEELADLFGELGAAVEAAALADLEG--LEEADLLINATPVGMAGPEGDSPVPAELLPKGAIVYDVVY 227 (283)
T ss_pred CCEEEEEeCCHHHHHHHHHHhhhccccccccccccccc--ccccCEEEECCCCCCCCCCCCCCCcHHhcCcCCEEEEecc
Confidence 8 99999999999999999997432 22333322 1258999999999999865455677778999999999999
Q ss_pred CCCchHHHHHHHHCCCeeeccHHHHHHHHHHHHHHhcCCCCCHHHHHHHHHhh
Q 010101 465 TPRNTRLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRKLVLEQ 517 (518)
Q Consensus 465 ~P~~T~ll~~A~~~G~~~i~G~~ml~~Qa~~qf~lw~g~~~p~~~~~~~~~~~ 517 (518)
+|.+|||+++|+++|+++++|++||++||++||++|||.++|.+.|++++.+.
T Consensus 228 ~P~~TplL~~A~~~G~~~idGl~Mlv~Qaa~aF~lwtg~~p~~~~~~~a~~~~ 280 (283)
T COG0169 228 NPLETPLLREARAQGAKTIDGLGMLVHQAAEAFELWTGVEPPVDVMKEALIEA 280 (283)
T ss_pred CCCCCHHHHHHHHcCCeEECcHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999988764
No 4
>PRK14027 quinate/shikimate dehydrogenase; Provisional
Probab=100.00 E-value=1.2e-70 Score=549.90 Aligned_cols=265 Identities=28% Similarity=0.398 Sum_probs=234.9
Q ss_pred CceEEEEecCCCCcccCHHHHHHHHHHcCCCceEEeccc-------CcHHHHHHHhcCCCCCEEEecccchHHHHhcccc
Q 010101 236 DTKIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLV-------DDVKEFFRTYSGTDFAGFSVGIPHKEPAVACCDE 308 (518)
Q Consensus 236 ~t~~~~liG~pi~hS~SP~~hn~~f~~~gl~~~y~~~~~-------~~l~~~~~~l~~~~~~G~~VT~P~K~~v~~~~d~ 308 (518)
++++|||||+||+||+||.|||++|+++|+|++|.++++ ++++++++.++.++|.|+|||||||+++++|+|+
T Consensus 3 ~~~~~gliG~Pi~hS~SP~ihn~~f~~~gl~~~Y~~~~v~~~~~~~~~l~~~~~~~~~~~~~G~nVT~P~K~~~~~~lD~ 82 (283)
T PRK14027 3 DSILLGLIGQGLDLSRTPAMHEAEGLAQGRATVYRRIDTLGSRASGQDLKTLLDAALYLGFNGLNITHPYKQAVLPLLDE 82 (283)
T ss_pred CceEEEEECCCccccCCHHHHHHHHHHcCCCeEEEEEecccccCCHHHHHHHHHHHHhcCCCEEEECccCHHHHHHHhhh
Confidence 478999999999999999999999999999999999996 3789999999888999999999999999999999
Q ss_pred cChhhhhcCceeEEEEeccCCeEEEeecCHHHHHHHHHHHHHhhccCCCCCCCCcccCCcEEEEEccchhHHHHHHHHHH
Q 010101 309 VHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALRERQGINGVASHTSPIAGKIFVLVGAGGAGRALAFGAKS 388 (518)
Q Consensus 309 ~~~~A~~iGavNTi~~~~~~g~l~G~NTD~~G~~~~l~~~l~~~~~~~~~~~~~~~l~~k~vlvlGaGg~araia~~L~~ 388 (518)
+|+.|+.+||||||++++ +|+|+||||||.||+.+|++. + ...++++++|+||||+|||++++|.+
T Consensus 83 l~~~A~~iGAVNTv~~~~-~g~l~G~NTD~~Gf~~~L~~~-----~--------~~~~~k~vlilGaGGaarAi~~aL~~ 148 (283)
T PRK14027 83 VSEQATQLGAVNTVVIDA-TGHTTGHNTDVSGFGRGMEEG-----L--------PNAKLDSVVQVGAGGVGNAVAYALVT 148 (283)
T ss_pred CCHHHHHhCCceEEEECC-CCcEEEEcCCHHHHHHHHHhc-----C--------cCcCCCeEEEECCcHHHHHHHHHHHH
Confidence 999999999999999852 899999999999999998641 1 23568999999999999999999999
Q ss_pred CCC-eEEEEeCCHHHHHHHHHHhcCcc----c---ccccccccCCCCccEEEEcCCCCCCCCCCCCCCChhhhcCCCEEE
Q 010101 389 RGA-RVIIFNRNYERAKALADAVSGEA----L---HFEYLHEFFPEKGMILANASAIGMEPNSDQSPVPKEALKAYELVF 460 (518)
Q Consensus 389 ~G~-~v~i~nRt~~ka~~la~~~~~~~----~---~~~~l~~~~~~~~divInatp~g~~~~~~~~~~~~~~l~~~~~v~ 460 (518)
+|+ +|+|+|||.+|+++|++.+.... + ++.++.. ....+|+||||||+||.+. +..|++.+.+.+..+|+
T Consensus 149 ~g~~~i~i~nR~~~ka~~La~~~~~~~~~~~~~~~~~~~~~~-~~~~~divINaTp~Gm~~~-~~~~~~~~~l~~~~~v~ 226 (283)
T PRK14027 149 HGVQKLQVADLDTSRAQALADVINNAVGREAVVGVDARGIED-VIAAADGVVNATPMGMPAH-PGTAFDVSCLTKDHWVG 226 (283)
T ss_pred CCCCEEEEEcCCHHHHHHHHHHHhhccCcceEEecCHhHHHH-HHhhcCEEEEcCCCCCCCC-CCCCCCHHHcCCCcEEE
Confidence 999 99999999999999998874211 1 1111111 2346899999999999875 44567777788889999
Q ss_pred EEeeCCCchHHHHHHHHCCCeeeccHHHHHHHHHHHHHHhcCCCCCHHHHHHHHHh
Q 010101 461 DAVYTPRNTRLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRKLVLE 516 (518)
Q Consensus 461 Di~Y~P~~T~ll~~A~~~G~~~i~G~~ml~~Qa~~qf~lw~g~~~p~~~~~~~~~~ 516 (518)
|++|+|.+|+|+++|+++||++++|++||++||++||++|||.++|.+.|++++.+
T Consensus 227 D~vY~P~~T~ll~~A~~~G~~~~~Gl~MLv~Qa~~~f~lw~G~~~~~~~~~~~~~~ 282 (283)
T PRK14027 227 DVVYMPIETELLKAARALGCETLDGTRMAIHQAVDAFRLFTGLEPDVSRMRETFLS 282 (283)
T ss_pred EcccCCCCCHHHHHHHHCCCEEEccHHHHHHHHHHHHHHHhCCCCCHHHHHHHHhh
Confidence 99999999999999999999999999999999999999999999999999997653
No 5
>PRK12749 quinate/shikimate dehydrogenase; Reviewed
Probab=100.00 E-value=4.2e-70 Score=547.81 Aligned_cols=266 Identities=32% Similarity=0.534 Sum_probs=236.1
Q ss_pred CCCCceEEEEecCCCCcccCHHHHHHHHHHcCCCceEEecccC--cHHHHHHHhcCCCCCEEEecccchHHHHhcccccC
Q 010101 233 INPDTKIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLVD--DVKEFFRTYSGTDFAGFSVGIPHKEPAVACCDEVH 310 (518)
Q Consensus 233 ~~~~t~~~~liG~pi~hS~SP~~hn~~f~~~gl~~~y~~~~~~--~l~~~~~~l~~~~~~G~~VT~P~K~~v~~~~d~~~ 310 (518)
++.+|++|||||+||+||+||.|||++|+++|+|++|.+++++ +|+++++.++..+|.|+|||||||++|++|+|++|
T Consensus 3 ~~~~t~~~gliG~Pi~hSlSP~ihn~~f~~~gl~~~Y~~~~v~~~~l~~~~~~l~~~~~~G~nVTiP~K~~~~~~~D~l~ 82 (288)
T PRK12749 3 VTAKYELIGLMAYPIRHSLSPEMQNKALEKAGLPFTYMAFEVDNDSFPGAIEGLKALKMRGTGVSMPNKQLACEYVDELT 82 (288)
T ss_pred cCCCceEEEEECCCcccccCHHHHHHHHHHcCCCeEEEEEecCHHHHHHHHHHHHhcCCCEEEECcCCHHHHHHHhccCC
Confidence 4567899999999999999999999999999999999999994 79999999988899999999999999999999999
Q ss_pred hhhhhcCceeEEEEeccCCeEEEeecCHHHHHHHHHHHHHhhccCCCCCCCCcccCCcEEEEEccchhHHHHHHHHHHCC
Q 010101 311 PLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALRERQGINGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRG 390 (518)
Q Consensus 311 ~~A~~iGavNTi~~~~~~g~l~G~NTD~~G~~~~l~~~l~~~~~~~~~~~~~~~l~~k~vlvlGaGg~araia~~L~~~G 390 (518)
+.|+.+||||||+++ +|+|+||||||.||+.+|++. + .++++++++|+||||+|||++++|..+|
T Consensus 83 ~~A~~iGAVNTv~~~--~g~l~G~NTD~~Gf~~~l~~~-----~--------~~~~~k~vlvlGaGGaarAi~~~l~~~g 147 (288)
T PRK12749 83 PAAKLVGAINTIVND--DGYLRGYNTDGTGHIRAIKES-----G--------FDIKGKTMVLLGAGGASTAIGAQGAIEG 147 (288)
T ss_pred HHHHHhCceeEEEcc--CCEEEEEecCHHHHHHHHHhc-----C--------CCcCCCEEEEECCcHHHHHHHHHHHHCC
Confidence 999999999999876 899999999999999998641 1 4567899999999999999999999999
Q ss_pred C-eEEEEeCC---HHHHHHHHHHhcCcc---cccccc------cccCCCCccEEEEcCCCCCCCCCCCCC-CChhhhcCC
Q 010101 391 A-RVIIFNRN---YERAKALADAVSGEA---LHFEYL------HEFFPEKGMILANASAIGMEPNSDQSP-VPKEALKAY 456 (518)
Q Consensus 391 ~-~v~i~nRt---~~ka~~la~~~~~~~---~~~~~l------~~~~~~~~divInatp~g~~~~~~~~~-~~~~~l~~~ 456 (518)
+ +|+|+||+ .+|+++|++.++... +.+.++ .+ ...++|+||||||+||.|..+..+ ++.+.+++.
T Consensus 148 ~~~i~i~nRt~~~~~ka~~la~~~~~~~~~~~~~~~~~~~~~l~~-~~~~aDivINaTp~Gm~~~~~~~~~~~~~~l~~~ 226 (288)
T PRK12749 148 LKEIKLFNRRDEFFDKALAFAQRVNENTDCVVTVTDLADQQAFAE-ALASADILTNGTKVGMKPLENESLVNDISLLHPG 226 (288)
T ss_pred CCEEEEEeCCccHHHHHHHHHHHhhhccCceEEEechhhhhhhhh-hcccCCEEEECCCCCCCCCCCCCCCCcHHHCCCC
Confidence 9 99999999 569999999885321 122222 11 235689999999999998655544 344567888
Q ss_pred CEEEEEeeCCCchHHHHHHHHCCCeeeccHHHHHHHHHHHHHHhcCCCCCHHHHHHHH
Q 010101 457 ELVFDAVYTPRNTRLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRKLV 514 (518)
Q Consensus 457 ~~v~Di~Y~P~~T~ll~~A~~~G~~~i~G~~ml~~Qa~~qf~lw~g~~~p~~~~~~~~ 514 (518)
.+|+|++|+|.+|+|+++|+++||++++|++||++||+.||++|||+++|.+.|++++
T Consensus 227 ~~v~D~vY~P~~T~ll~~A~~~G~~~~~Gl~ML~~Qa~~~f~lwtg~~~~~~~~~~~~ 284 (288)
T PRK12749 227 LLVTECVYNPHMTKLLQQAQQAGCKTIDGYGMLLWQGAEQFTLWTGKDFPLEYVKQVM 284 (288)
T ss_pred CEEEEecCCCccCHHHHHHHHCCCeEECCHHHHHHHHHHHHHHhcCCCCCHHHHHHHh
Confidence 9999999999999999999999999999999999999999999999999999999865
No 6
>PRK12549 shikimate 5-dehydrogenase; Reviewed
Probab=100.00 E-value=5.9e-70 Score=546.79 Aligned_cols=265 Identities=30% Similarity=0.403 Sum_probs=238.6
Q ss_pred CCceEEEEecCCCCcccCHHHHHHHHHHcCCCceEEecccC-------cHHHHHHHhcCCCCCEEEecccchHHHHhccc
Q 010101 235 PDTKIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLVD-------DVKEFFRTYSGTDFAGFSVGIPHKEPAVACCD 307 (518)
Q Consensus 235 ~~t~~~~liG~pi~hS~SP~~hn~~f~~~gl~~~y~~~~~~-------~l~~~~~~l~~~~~~G~~VT~P~K~~v~~~~d 307 (518)
..+++|||||+||+||+||.|||++|+++|+|++|.+++++ +++++++.++..+|.|+|||||||+++++|+|
T Consensus 3 ~~~~~~~liG~Pi~hS~SP~ihn~~f~~~gl~~~Y~~~~v~~~~v~~~~l~~~~~~l~~~~~~G~nVTiP~K~~v~~~~D 82 (284)
T PRK12549 3 RPSFLAGLIGAGIQASLSPAMHEAEGDAQGLRYVYRLIDLDALGLTADALPELLDAAERMGFAGLNITHPCKQAVIPHLD 82 (284)
T ss_pred ccceEEEEECCCcccccCHHHHHHHHHHcCCCeEEEEEeeccccCCHHHHHHHHHHHHhcCCCEEEECcCCHHHHHHHhc
Confidence 45789999999999999999999999999999999999863 68999999988899999999999999999999
Q ss_pred ccChhhhhcCceeEEEEeccCCeEEEeecCHHHHHHHHHHHHHhhccCCCCCCCCcccCCcEEEEEccchhHHHHHHHHH
Q 010101 308 EVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALRERQGINGVASHTSPIAGKIFVLVGAGGAGRALAFGAK 387 (518)
Q Consensus 308 ~~~~~A~~iGavNTi~~~~~~g~l~G~NTD~~G~~~~l~~~l~~~~~~~~~~~~~~~l~~k~vlvlGaGg~araia~~L~ 387 (518)
++|+.|+.+||||||+++ +|+|+||||||.||+.+|+... ..+.+++++|+|+||+||+++++|.
T Consensus 83 ~~~~~A~~iGAvNTv~~~--~g~l~G~NTD~~G~~~~l~~~~-------------~~~~~k~vlIlGaGGaaraia~aL~ 147 (284)
T PRK12549 83 ELSDDARALGAVNTVVFR--DGRRIGHNTDWSGFAESFRRGL-------------PDASLERVVQLGAGGAGAAVAHALL 147 (284)
T ss_pred cCCHHHHHhCCceEEEec--CCEEEEEcCCHHHHHHHHHhhc-------------cCccCCEEEEECCcHHHHHHHHHHH
Confidence 999999999999999987 8999999999999999987421 2456799999999999999999999
Q ss_pred HCCC-eEEEEeCCHHHHHHHHHHhcCc-----ccccccccccCCCCccEEEEcCCCCCCCCCCCCCCChhhhcCCCEEEE
Q 010101 388 SRGA-RVIIFNRNYERAKALADAVSGE-----ALHFEYLHEFFPEKGMILANASAIGMEPNSDQSPVPKEALKAYELVFD 461 (518)
Q Consensus 388 ~~G~-~v~i~nRt~~ka~~la~~~~~~-----~~~~~~l~~~~~~~~divInatp~g~~~~~~~~~~~~~~l~~~~~v~D 461 (518)
+.|+ +|+|+||+.+|++++++.++.. ...++++.+ ...++|+||||||+||.+. +..|++.+++++..+|+|
T Consensus 148 ~~G~~~I~I~nR~~~ka~~la~~l~~~~~~~~~~~~~~~~~-~~~~aDiVInaTp~Gm~~~-~~~~~~~~~l~~~~~v~D 225 (284)
T PRK12549 148 TLGVERLTIFDVDPARAAALADELNARFPAARATAGSDLAA-ALAAADGLVHATPTGMAKH-PGLPLPAELLRPGLWVAD 225 (284)
T ss_pred HcCCCEEEEECCCHHHHHHHHHHHHhhCCCeEEEeccchHh-hhCCCCEEEECCcCCCCCC-CCCCCCHHHcCCCcEEEE
Confidence 9999 9999999999999999987532 122333332 3467899999999999875 345788888999999999
Q ss_pred EeeCCCchHHHHHHHHCCCeeeccHHHHHHHHHHHHHHhcCCCCCHHHHHHHHHh
Q 010101 462 AVYTPRNTRLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRKLVLE 516 (518)
Q Consensus 462 i~Y~P~~T~ll~~A~~~G~~~i~G~~ml~~Qa~~qf~lw~g~~~p~~~~~~~~~~ 516 (518)
++|+|.+|+|+++|+++||++++|++||++||+.||++|||+++|.+.|++++.+
T Consensus 226 ivY~P~~T~ll~~A~~~G~~~~~G~~ML~~Qa~~~f~~wtg~~~~~~~~~~~~~~ 280 (284)
T PRK12549 226 IVYFPLETELLRAARALGCRTLDGGGMAVFQAVDAFELFTGREPDAERMLAHFAS 280 (284)
T ss_pred eeeCCCCCHHHHHHHHCCCeEecCHHHHHHHHHHHHHHhcCCCCCHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999998865
No 7
>PRK12548 shikimate 5-dehydrogenase; Provisional
Probab=100.00 E-value=1.2e-68 Score=539.57 Aligned_cols=267 Identities=31% Similarity=0.535 Sum_probs=238.1
Q ss_pred CCCCceEEEEecCCCCcccCHHHHHHHHHHcCCCceEEecccC--cHHHHHHHhcCCCCCEEEecccchHHHHhcccccC
Q 010101 233 INPDTKIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLVD--DVKEFFRTYSGTDFAGFSVGIPHKEPAVACCDEVH 310 (518)
Q Consensus 233 ~~~~t~~~~liG~pi~hS~SP~~hn~~f~~~gl~~~y~~~~~~--~l~~~~~~l~~~~~~G~~VT~P~K~~v~~~~d~~~ 310 (518)
++.+|++|||||+||+||+||.|||++|+++|+|+.|.+++++ ++.++++.++..+|.|+|||||||++|++|+|++|
T Consensus 5 ~~~~~~~~~liG~Pi~hS~SP~ihn~~f~~~gl~~~Y~~~~v~~~~l~~~~~~~~~~~~~G~nVT~P~K~~v~~~ld~~~ 84 (289)
T PRK12548 5 ISGTTGLLGLIGSPVGHSGSPAMYNYSFQKAGLDYAYLAFDIPVDKVPDAIKAIKTFNMRGANVTMPCKSEAAKYMDELS 84 (289)
T ss_pred cCCceeEEEEEcCCcccccCHHHHHHHHHHcCCCEEEEEEecCHHHHHHHHHHHHHCCCCEEEECccCHHHHHHHhhcCC
Confidence 5667889999999999999999999999999999999999994 79999999988899999999999999999999999
Q ss_pred hhhhhcCceeEEEEeccCCeEEEeecCHHHHHHHHHHHHHhhccCCCCCCCCcccCCcEEEEEccchhHHHHHHHHHHCC
Q 010101 311 PLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALRERQGINGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRG 390 (518)
Q Consensus 311 ~~A~~iGavNTi~~~~~~g~l~G~NTD~~G~~~~l~~~l~~~~~~~~~~~~~~~l~~k~vlvlGaGg~araia~~L~~~G 390 (518)
+.|+.+||||||+++ +|+|+||||||.||+.+|++. + ..+++++++|+|+||+|||++++|++.|
T Consensus 85 ~~A~~iGavNTi~~~--~g~l~G~NTD~~G~~~~l~~~-----~--------~~~~~k~vlI~GAGGagrAia~~La~~G 149 (289)
T PRK12548 85 PAARIIGAVNTIVND--DGKLTGHITDGLGFVRNLREH-----G--------VDVKGKKLTVIGAGGAATAIQVQCALDG 149 (289)
T ss_pred HHHHHhCceeEEEeE--CCEEEEEecCHHHHHHHHHhc-----C--------CCcCCCEEEEECCcHHHHHHHHHHHHCC
Confidence 999999999999887 899999999999999998642 1 3467899999999999999999999999
Q ss_pred C-eEEEEeCCH---HHHHHHHHHhcCcc-------ccccc---ccccCCCCccEEEEcCCCCCCCCCCCCCC-ChhhhcC
Q 010101 391 A-RVIIFNRNY---ERAKALADAVSGEA-------LHFEY---LHEFFPEKGMILANASAIGMEPNSDQSPV-PKEALKA 455 (518)
Q Consensus 391 ~-~v~i~nRt~---~ka~~la~~~~~~~-------~~~~~---l~~~~~~~~divInatp~g~~~~~~~~~~-~~~~l~~ 455 (518)
+ +|+|+||+. ++++++++++.... .++++ +.+ ....+|+||||||+||.|..+..|+ +.+.+.+
T Consensus 150 ~~~V~I~~R~~~~~~~a~~l~~~l~~~~~~~~~~~~d~~~~~~~~~-~~~~~DilINaTp~Gm~~~~~~~~~~~~~~l~~ 228 (289)
T PRK12548 150 AKEITIFNIKDDFYERAEQTAEKIKQEVPECIVNVYDLNDTEKLKA-EIASSDILVNATLVGMKPNDGETNIKDTSVFRK 228 (289)
T ss_pred CCEEEEEeCCchHHHHHHHHHHHHhhcCCCceeEEechhhhhHHHh-hhccCCEEEEeCCCCCCCCCCCCCCCcHHhcCC
Confidence 9 699999997 89999988774211 12222 112 2346799999999999987666777 5567888
Q ss_pred CCEEEEEeeCCCchHHHHHHHHCCCeeeccHHHHHHHHHHHHHHhcCCCCCHHHHHHHHH
Q 010101 456 YELVFDAVYTPRNTRLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRKLVL 515 (518)
Q Consensus 456 ~~~v~Di~Y~P~~T~ll~~A~~~G~~~i~G~~ml~~Qa~~qf~lw~g~~~p~~~~~~~~~ 515 (518)
..+|+|++|+|.+|+|+++|+++||++++|++||++||++||++|||+++|.+.|++++.
T Consensus 229 ~~~v~D~vY~P~~T~ll~~A~~~G~~~~~G~~ML~~Qa~~~f~lwtg~~~~~~~~~~~~~ 288 (289)
T PRK12548 229 DLVVADTVYNPKKTKLLEDAEAAGCKTVGGLGMLLWQGAEAYKLYTGKDMPVEEVKELYF 288 (289)
T ss_pred CCEEEEecCCCCCCHHHHHHHHCCCeeeCcHHHHHHHHHHHHHHhcCCCCCHHHHHHHhh
Confidence 999999999999999999999999999999999999999999999999999999999874
No 8
>PRK00258 aroE shikimate 5-dehydrogenase; Reviewed
Probab=100.00 E-value=5.4e-68 Score=532.56 Aligned_cols=270 Identities=33% Similarity=0.547 Sum_probs=242.3
Q ss_pred CCCCceEEEEecCCCCcccCHHHHHHHHHHcCCCceEEeccc--CcHHHHHHHhcCCCCCEEEecccchHHHHhcccccC
Q 010101 233 INPDTKIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLV--DDVKEFFRTYSGTDFAGFSVGIPHKEPAVACCDEVH 310 (518)
Q Consensus 233 ~~~~t~~~~liG~pi~hS~SP~~hn~~f~~~gl~~~y~~~~~--~~l~~~~~~l~~~~~~G~~VT~P~K~~v~~~~d~~~ 310 (518)
++.+|++|||||+||+||+||.|||++|+++|+|+.|.++++ ++++++++.++..+|.|+|||||||+++++|+|++|
T Consensus 1 ~~~~~~~~~viG~pi~hS~SP~~hn~~~~~~gl~~~y~~~~v~~~~l~~~~~~~~~~~~~G~nVT~P~K~~~~~~~d~~~ 80 (278)
T PRK00258 1 ITGKTRLYAVIGNPIAHSKSPLIHNAAFKQLGLDGVYLAILVPPEDLEDAVKGFFALGGRGANVTVPFKEAAFALADELS 80 (278)
T ss_pred CCCceeEEEEECCchhcccCHHHHHHHHHHcCCCcEEEEEecCHHHHHHHHHHHHhCCCCEEEECcCCHHHHHHHhhcCC
Confidence 356789999999999999999999999999999999999999 589999999988899999999999999999999999
Q ss_pred hhhhhcCceeEEEEeccCCeEEEeecCHHHHHHHHHHHHHhhccCCCCCCCCcccCCcEEEEEccchhHHHHHHHHHHCC
Q 010101 311 PLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALRERQGINGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRG 390 (518)
Q Consensus 311 ~~A~~iGavNTi~~~~~~g~l~G~NTD~~G~~~~l~~~l~~~~~~~~~~~~~~~l~~k~vlvlGaGg~araia~~L~~~G 390 (518)
+.|+.+||||||+++ +|+|+||||||.||+.+|++.+ + ..+.+++++|+|+||+||+++++|...|
T Consensus 81 ~~A~~igavNtv~~~--~g~l~G~NTD~~G~~~~l~~~~----~--------~~~~~k~vlVlGaGg~a~ai~~aL~~~g 146 (278)
T PRK00258 81 ERARLIGAVNTLVLE--DGRLIGDNTDGIGFVRALEERL----G--------VDLKGKRILILGAGGAARAVILPLLDLG 146 (278)
T ss_pred HHHHHhCCceEEEee--CCEEEEEcccHHHHHHHHHhcc----C--------CCCCCCEEEEEcCcHHHHHHHHHHHHcC
Confidence 999999999999976 8999999999999999986421 1 3567899999999999999999999999
Q ss_pred C-eEEEEeCCHHHHHHHHHHhcCcc-ccc-ccccccCCCCccEEEEcCCCCCCCCCCCCCCChhhhcCCCEEEEEeeCCC
Q 010101 391 A-RVIIFNRNYERAKALADAVSGEA-LHF-EYLHEFFPEKGMILANASAIGMEPNSDQSPVPKEALKAYELVFDAVYTPR 467 (518)
Q Consensus 391 ~-~v~i~nRt~~ka~~la~~~~~~~-~~~-~~l~~~~~~~~divInatp~g~~~~~~~~~~~~~~l~~~~~v~Di~Y~P~ 467 (518)
+ +|+|+||+.++++++++.++... +.+ .++.+ .+.++|+||||||+||.|..+..|++.+.+++..+|+|++|+|.
T Consensus 147 ~~~V~v~~R~~~~a~~l~~~~~~~~~~~~~~~~~~-~~~~~DivInaTp~g~~~~~~~~~~~~~~l~~~~~v~DivY~P~ 225 (278)
T PRK00258 147 VAEITIVNRTVERAEELAKLFGALGKAELDLELQE-ELADFDLIINATSAGMSGELPLPPLPLSLLRPGTIVYDMIYGPL 225 (278)
T ss_pred CCEEEEEeCCHHHHHHHHHHhhhccceeecccchh-ccccCCEEEECCcCCCCCCCCCCCCCHHHcCCCCEEEEeecCCC
Confidence 6 99999999999999999886332 223 12222 45679999999999998865556777788999999999999999
Q ss_pred chHHHHHHHHCCCeeeccHHHHHHHHHHHHHHhcCCCCCHHHHHHHHHhh
Q 010101 468 NTRLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRKLVLEQ 517 (518)
Q Consensus 468 ~T~ll~~A~~~G~~~i~G~~ml~~Qa~~qf~lw~g~~~p~~~~~~~~~~~ 517 (518)
+|+|+++|+++||++++|++||++||+.||++|||.++|.+.|++++.+.
T Consensus 226 ~T~ll~~A~~~G~~~~~G~~Ml~~Qa~~~f~~wtg~~~~~~~~~~~~~~~ 275 (278)
T PRK00258 226 PTPFLAWAKAQGARTIDGLGMLVHQAAEAFELWTGVRPPVEPMLAALRAA 275 (278)
T ss_pred CCHHHHHHHHCcCeecCCHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999988653
No 9
>PRK12550 shikimate 5-dehydrogenase; Reviewed
Probab=100.00 E-value=7e-68 Score=526.72 Aligned_cols=262 Identities=31% Similarity=0.436 Sum_probs=233.9
Q ss_pred cCCCCceE-EEEecCCCCcccCHHHHHHHHHHcCCCceEEecccCcHHHHHHHhcCCCCCEEEecccchHHHHhcccccC
Q 010101 232 HINPDTKI-FGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLVDDVKEFFRTYSGTDFAGFSVGIPHKEPAVACCDEVH 310 (518)
Q Consensus 232 ~~~~~t~~-~~liG~pi~hS~SP~~hn~~f~~~gl~~~y~~~~~~~l~~~~~~l~~~~~~G~~VT~P~K~~v~~~~d~~~ 310 (518)
+++++|++ |||||+| ||+||.|||++|+++|+|++|.+++.++++++++.++..+|.|+|||||||++|++|+|++|
T Consensus 4 ~~~~~~~~~~gliG~P--~~~Sp~ihn~~f~~~gl~~~Y~~~~~~~l~~~~~~l~~~~~~G~nVT~P~K~~~~~~lD~l~ 81 (272)
T PRK12550 4 MINKDTQLCISLAARP--SNFGTRFHNYLYEALGLNFLYKAFTTTDLTAAIGGVRALGIRGCAVSMPFKEAVIPLVDELD 81 (272)
T ss_pred cCCCCceEEEEEEccc--hhcCHHHHHHHHHHcCCCcEEEecCHhHHHHHHHHHHhcCCCEEEECcCCHHHHHHHhhcCC
Confidence 46677885 9999999 77889999999999999999999998899999999988899999999999999999999999
Q ss_pred hhhhhcCceeEEEEeccCCeEEEeecCHHHHHHHHHHHHHhhccCCCCCCCCcccCCcEEEEEccchhHHHHHHHHHHCC
Q 010101 311 PLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALRERQGINGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRG 390 (518)
Q Consensus 311 ~~A~~iGavNTi~~~~~~g~l~G~NTD~~G~~~~l~~~l~~~~~~~~~~~~~~~l~~k~vlvlGaGg~araia~~L~~~G 390 (518)
+.|+.+||||||+++ +|+|+||||||.||+++|++. + .. .+++++|+||||+|||++++|.++|
T Consensus 82 ~~A~~iGAVNTi~~~--~g~l~G~NTD~~Gf~~~L~~~-----~--------~~-~~~~vlilGaGGaarAi~~aL~~~g 145 (272)
T PRK12550 82 PSAQAIESVNTIVNT--DGHLKAYNTDYIAIAKLLASY-----Q--------VP-PDLVVALRGSGGMAKAVAAALRDAG 145 (272)
T ss_pred HHHHHhCCeeEEEee--CCEEEEEecCHHHHHHHHHhc-----C--------CC-CCCeEEEECCcHHHHHHHHHHHHCC
Confidence 999999999999887 899999999999999998641 1 22 3578999999999999999999999
Q ss_pred C-eEEEEeCCHHHHHHHHHHhcCcccccccccccCCCCccEEEEcCCCCCCCCC--CCCCCChhhhcCCCEEEEEeeCCC
Q 010101 391 A-RVIIFNRNYERAKALADAVSGEALHFEYLHEFFPEKGMILANASAIGMEPNS--DQSPVPKEALKAYELVFDAVYTPR 467 (518)
Q Consensus 391 ~-~v~i~nRt~~ka~~la~~~~~~~~~~~~l~~~~~~~~divInatp~g~~~~~--~~~~~~~~~l~~~~~v~Di~Y~P~ 467 (518)
+ +|+|+||+.+++++|++.++.... +++ ....+|+||||||+||.+.. +..|++.+.+++..+|+|++|+|.
T Consensus 146 ~~~i~i~nR~~~~a~~la~~~~~~~~--~~~---~~~~~dlvINaTp~Gm~~~~~~~~~pi~~~~l~~~~~v~D~vY~P~ 220 (272)
T PRK12550 146 FTDGTIVARNEKTGKALAELYGYEWR--PDL---GGIEADILVNVTPIGMAGGPEADKLAFPEAEIDAASVVFDVVALPA 220 (272)
T ss_pred CCEEEEEeCCHHHHHHHHHHhCCcch--hhc---ccccCCEEEECCccccCCCCccccCCCCHHHcCCCCEEEEeecCCc
Confidence 9 899999999999999998753221 111 12458999999999998754 234677788999999999999999
Q ss_pred chHHHHHHHHCCCeeeccHHHHHHHHHHHHHHhcCCCCCHHHHHHHHHh
Q 010101 468 NTRLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRKLVLE 516 (518)
Q Consensus 468 ~T~ll~~A~~~G~~~i~G~~ml~~Qa~~qf~lw~g~~~p~~~~~~~~~~ 516 (518)
+|+|+++|+++||++++|++||++||+.||++|||+++|.+.|++++.+
T Consensus 221 ~T~ll~~A~~~G~~~i~Gl~MLi~Qa~~~f~lwtg~~~~~~~~~~~~~~ 269 (272)
T PRK12550 221 ETPLIRYARARGKTVITGAEVIALQAVEQFVLYTGVRPSDELIAEAAAF 269 (272)
T ss_pred cCHHHHHHHHCcCeEeCCHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999998754
No 10
>TIGR01809 Shik-DH-AROM shikimate-5-dehydrogenase, fungal AROM-type. This model represents a clade of shikimate-5-dehydrogenases found in Corynebacterium, Mycobacteria and fungi. The fungal sequences are pentafunctional proteins known as AroM which contain the central five seven steps in the chorismate biosynthesis pathway. The Corynebacterium and Mycobacterial sequences represent the sole shikimate-5-dehydrogenases in species which otherwise have every enzyme of the chorismate biosynthesis pathway.
Probab=100.00 E-value=3.8e-66 Score=519.31 Aligned_cols=263 Identities=26% Similarity=0.393 Sum_probs=224.9
Q ss_pred CceEEEEecCCCCcccCHHHHHHHHHHcCCCceEEecccC---cHHHHHHHhcCCCCCEEEecccchHHHHhcccccChh
Q 010101 236 DTKIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLVD---DVKEFFRTYSGTDFAGFSVGIPHKEPAVACCDEVHPL 312 (518)
Q Consensus 236 ~t~~~~liG~pi~hS~SP~~hn~~f~~~gl~~~y~~~~~~---~l~~~~~~l~~~~~~G~~VT~P~K~~v~~~~d~~~~~ 312 (518)
.+++|||||+||+||+||.|||++|+++|+|+.|.++++. ++.++++.++ .+|.|+|||||||+++++|+|++|+.
T Consensus 4 ~~~~~~liG~Pi~hS~SP~ihn~~f~~~gl~~~y~~~~~~~~~~l~~~~~~~~-~~~~G~nVT~P~K~~~~~~~d~~~~~ 82 (282)
T TIGR01809 4 GPKKAFIIGKPIAHSRSPHLHNAGYEILGLPDKTYEFETCSAEELKEVLSGFG-PQFGGASVTIPLKFAILRFADEHTDR 82 (282)
T ss_pred CCeEEEEEcCCchhccCHHHHHHHHHHcCCCcEEEeeecCCHHHHHHHHHhcC-CCCcEEEECCCCHHHHHHHhhcCCHH
Confidence 3689999999999999999999999999999999999873 5788888774 49999999999999999999999999
Q ss_pred hhhcCceeEEEEeccCCeEEEeecCHHHHHHHHHHHHHhhccCCCCCCCCcccCCcEEEEEccchhHHHHHHHHHHCCC-
Q 010101 313 AKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALRERQGINGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGA- 391 (518)
Q Consensus 313 A~~iGavNTi~~~~~~g~l~G~NTD~~G~~~~l~~~l~~~~~~~~~~~~~~~l~~k~vlvlGaGg~araia~~L~~~G~- 391 (518)
|+.+||||||++++ +|+|+||||||.||+.+|++. + ....+++++++|||+||+||+++++|.++|+
T Consensus 83 A~~iGAVNTv~~~~-~g~l~G~NTD~~G~~~~l~~~-----~------~~~~~~~k~vlvlGaGGaarai~~aL~~~G~~ 150 (282)
T TIGR01809 83 ASLIGSVNTLLRTQ-NGIWKGDNTDWDGIAGALANI-----G------KFEPLAGFRGLVIGAGGTSRAAVYALASLGVT 150 (282)
T ss_pred HHHhCceeEEEEcC-CCcEEEecCCHHHHHHHHHhh-----C------CccccCCceEEEEcCcHHHHHHHHHHHHcCCC
Confidence 99999999999853 789999999999999998641 1 0013578999999999999999999999999
Q ss_pred eEEEEeCCHHHHHHHHHHhcCcc--ccc---ccccccCCCCccEEEEcCCCCCCCCCCCCCCCh-------hhhcCCCEE
Q 010101 392 RVIIFNRNYERAKALADAVSGEA--LHF---EYLHEFFPEKGMILANASAIGMEPNSDQSPVPK-------EALKAYELV 459 (518)
Q Consensus 392 ~v~i~nRt~~ka~~la~~~~~~~--~~~---~~l~~~~~~~~divInatp~g~~~~~~~~~~~~-------~~l~~~~~v 459 (518)
+|+|+|||.+|+++|+++++... ..+ +++.. ...++|+||||||+||... ...+.. +.+++..+|
T Consensus 151 ~i~I~nRt~~ka~~La~~~~~~~~~~~~~~~~~~~~-~~~~~DiVInaTp~g~~~~--~~~l~~~~~~~~~~~~~~~~~v 227 (282)
T TIGR01809 151 DITVINRNPDKLSRLVDLGVQVGVITRLEGDSGGLA-IEKAAEVLVSTVPADVPAD--YVDLFATVPFLLLKRKSSEGIF 227 (282)
T ss_pred eEEEEeCCHHHHHHHHHHhhhcCcceeccchhhhhh-cccCCCEEEECCCCCCCCC--HHHhhhhhhhhccccCCCCcEE
Confidence 89999999999999999886321 112 23323 3467899999999998532 211110 113467899
Q ss_pred EEEeeCCCchHHHHHHHHCCCeeeccHHHHHHHHHHHHHHhcCCCCCHHHHHHHH
Q 010101 460 FDAVYTPRNTRLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRKLV 514 (518)
Q Consensus 460 ~Di~Y~P~~T~ll~~A~~~G~~~i~G~~ml~~Qa~~qf~lw~g~~~p~~~~~~~~ 514 (518)
+|++|+|.+|+|+++|+++||++++|++||++||+.||++|||.++|.+.|++++
T Consensus 228 ~D~vY~P~~T~ll~~A~~~G~~~~~Gl~MLv~Qa~~~f~lwtg~~~~~~~~~~~~ 282 (282)
T TIGR01809 228 LDAAYDPWPTPLVAIVSAAGWRVISGLQMLLHQGFAQFEQWTGMPAPREAMACAL 282 (282)
T ss_pred EEEeeCCCCCHHHHHHHHCCCEEECcHHHHHHHHHHHHHHHHCCCChHHHHHhhC
Confidence 9999999999999999999999999999999999999999999999999998864
No 11
>TIGR00507 aroE shikimate 5-dehydrogenase. This model finds proteins from prokaryotes and functionally equivalent domains from larger, multifunctional proteins of fungi and plants. Below the trusted cutoff of 180, but above the noise cutoff of 20, are the putative shikimate dehydrogenases of Thermotoga maritima and Mycobacterium tuberculosis, and uncharacterized paralogs of shikimate dehydrogenase from E. coli and H. influenzae. The related enzyme quinate 5-dehydrogenase scores below the noise cutoff. A neighbor-joining tree, constructed with quinate 5-dehydrogenases as the outgroup, shows the Clamydial homolog as clustering among the shikimate dehydrogenases, although the sequence is unusual in the degree of sequence divergence and the presence of an additional N-terminal domain.
Probab=100.00 E-value=8e-65 Score=507.83 Aligned_cols=264 Identities=35% Similarity=0.548 Sum_probs=234.8
Q ss_pred eEEEEecCCCCcccCHHHHHHHHHHcCCCceEEecccC--cHHHHHHHhcCCCCCEEEecccchHHHHhcccccChhhhh
Q 010101 238 KIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLVD--DVKEFFRTYSGTDFAGFSVGIPHKEPAVACCDEVHPLAKS 315 (518)
Q Consensus 238 ~~~~liG~pi~hS~SP~~hn~~f~~~gl~~~y~~~~~~--~l~~~~~~l~~~~~~G~~VT~P~K~~v~~~~d~~~~~A~~ 315 (518)
++|||||+||+||+||.|||++|+++|+|+.|.+++++ +++++++.++.++|.|+|||||||+++++|+|++|+.|+.
T Consensus 1 ~~~~viG~pi~hS~SP~~hn~~~~~~g~~~~y~~~~v~~~~l~~~~~~~~~~~~~G~nVT~P~K~~~~~~~d~~~~~A~~ 80 (270)
T TIGR00507 1 KLYGVIGNPIAHSKSPLIHNAFFKQLGLEGPYIAFLVPPDDLEDALSGFFALGFKGANVTSPFKEEAFQFLDEIDERAKL 80 (270)
T ss_pred CEEEEECCccccccCHHHHHHHHHHcCCCcEEEEEecCHHHHHHHHHHHHhcCCCEEEECcCCHHHHHHHhhhCCHHHHH
Confidence 47999999999999999999999999999999999994 7999999998889999999999999999999999999999
Q ss_pred cCceeEEEEeccCCeEEEeecCHHHHHHHHHHHHHhhccCCCCCCCCcccCCcEEEEEccchhHHHHHHHHHHCCCeEEE
Q 010101 316 IGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALRERQGINGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGARVII 395 (518)
Q Consensus 316 iGavNTi~~~~~~g~l~G~NTD~~G~~~~l~~~l~~~~~~~~~~~~~~~l~~k~vlvlGaGg~araia~~L~~~G~~v~i 395 (518)
+||||||+++ +|+|+||||||.||+.+|++ . + ...++++++|+|+||+|++++++|.+.|++|++
T Consensus 81 ~gavNti~~~--~g~l~g~NTD~~G~~~~l~~-~----~--------~~~~~k~vliiGaGg~g~aia~~L~~~g~~v~v 145 (270)
T TIGR00507 81 AGAVNTLKLE--DGKLVGYNTDGIGLVSDLER-L----I--------PLRPNQRVLIIGAGGAARAVALPLLKADCNVII 145 (270)
T ss_pred hCCceEEEee--CCEEEEEcCCHHHHHHHHHh-c----C--------CCccCCEEEEEcCcHHHHHHHHHHHHCCCEEEE
Confidence 9999999977 89999999999999999864 1 1 234578999999999999999999999999999
Q ss_pred EeCCHHHHHHHHHHhcCcc-cccccccccCCCCccEEEEcCCCCCCCCCCCCCCChhhhcCCCEEEEEeeCCCchHHHHH
Q 010101 396 FNRNYERAKALADAVSGEA-LHFEYLHEFFPEKGMILANASAIGMEPNSDQSPVPKEALKAYELVFDAVYTPRNTRLLRE 474 (518)
Q Consensus 396 ~nRt~~ka~~la~~~~~~~-~~~~~l~~~~~~~~divInatp~g~~~~~~~~~~~~~~l~~~~~v~Di~Y~P~~T~ll~~ 474 (518)
+||+.++++++++.++... .....+.+....++|+||||||.||.+..+..+++.+.++++.+|+|++|+|.+|+|+++
T Consensus 146 ~~R~~~~~~~la~~~~~~~~~~~~~~~~~~~~~~DivInatp~gm~~~~~~~~~~~~~l~~~~~v~D~~y~p~~T~ll~~ 225 (270)
T TIGR00507 146 ANRTVSKAEELAERFQRYGEIQAFSMDELPLHRVDLIINATSAGMSGNIDEPPVPAEKLKEGMVVYDMVYNPGETPFLAE 225 (270)
T ss_pred EeCCHHHHHHHHHHHhhcCceEEechhhhcccCccEEEECCCCCCCCCCCCCCCCHHHcCCCCEEEEeccCCCCCHHHHH
Confidence 9999999999998875311 111111111234689999999999988665566777788888999999999999999999
Q ss_pred HHHCCCeeeccHHHHHHHHHHHHHHhcCCCCCHHHHHHHHHh
Q 010101 475 AAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRKLVLE 516 (518)
Q Consensus 475 A~~~G~~~i~G~~ml~~Qa~~qf~lw~g~~~p~~~~~~~~~~ 516 (518)
|+++||++++|++||++||+.||++|||+++|.+.|++++.+
T Consensus 226 A~~~G~~~vdG~~Ml~~Qa~~~f~~w~g~~~~~~~~~~~~~~ 267 (270)
T TIGR00507 226 AKSLGTKTIDGLGMLVAQAALAFELWTGVEPDIEKMFEQLIA 267 (270)
T ss_pred HHHCCCeeeCCHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHH
Confidence 999999999999999999999999999999999999998865
No 12
>PRK02412 aroD 3-dehydroquinate dehydratase; Provisional
Probab=100.00 E-value=1.3e-51 Score=407.06 Aligned_cols=227 Identities=19% Similarity=0.327 Sum_probs=204.7
Q ss_pred cccCCceEEEeecCCCHHHHHHHHHHHHhhCCCEEEEEeccCC-CCcH----HHHHHHhcC-CCCcEEEEeecCCCCCCC
Q 010101 4 AAKNSLLVCTQLECETTEEMQASIEQAKVEGADLVELCIDSME-FSHI----SEVDKLIQH-PTLPAIVSYRLKSSRKSS 77 (518)
Q Consensus 4 ~~~~~~~icv~l~~~~~~~~~~~~~~~~~~g~D~vElRlD~l~-~~~~----~~l~~l~~~-~~~PiI~T~R~~~eGG~~ 77 (518)
...+.|+||+||.+++.+|++.+++.+...++|+||||+|+|. .+.. +.+..+++. .++|+|||+|+++|||.|
T Consensus 11 ~~~~~~~i~v~l~~~~~~e~~~~~~~~~~~~aD~vElRlD~l~~~~~~~~~~~~~~~l~~~~~~~PiI~T~R~~~eGG~~ 90 (253)
T PRK02412 11 IGEGAPKIIVPIMGKTLEEVLAEALAISKYDADIIEWRADFLEKISDVESVLAAAPAIREKFAGKPLLFTFRTAKEGGEI 90 (253)
T ss_pred eCCCCcEEEEEeCCCCHHHHHHHHHHHhhcCCCEEEEEechhhccCCHHHHHHHHHHHHHhcCCCcEEEEECChhhCCCC
Confidence 3567899999999999999999998877789999999999997 3321 234455543 368999999999999999
Q ss_pred CCCcHHHHHHHHHHHhhcC-CcEEEEecCCCCchhhHHHh-hcCCCcEEEEeeecCCCCCCChhHHHHHHHHHHHcCCCE
Q 010101 78 DEACKNTCLQVLRRALDLD-VEFVEMDYEVASDPLMSEII-YSRSNTKIIVSSYLNGGGKPTTEKLGDVIACMQATGADV 155 (518)
Q Consensus 78 ~~~~~~~~~~ll~~~~~~g-~~yvDiEl~~~~~~~~~l~~-~~~~~~kiI~S~H~f~~~tp~~~~l~~~~~~~~~~gadi 155 (518)
+.+ +++|+++++.+++.| +||||||++.+.+.++++.. .|+.++++|+||||| ++||+.+++.+++++|.++||||
T Consensus 91 ~~~-~~~~~~ll~~~~~~~~~d~vDiEl~~~~~~~~~l~~~~~~~~~kvI~S~H~f-~~tP~~~~l~~~~~~~~~~gaDi 168 (253)
T PRK02412 91 ALS-DEEYLALIKAVIKSGLPDYIDVELFSGKDVVKEMVAFAHEHGVKVVLSYHDF-EKTPPKEEIVERLRKMESLGADI 168 (253)
T ss_pred CCC-HHHHHHHHHHHHhcCCCCEEEEeccCChHHHHHHHHHHHHcCCEEEEeeCCC-CCCcCHHHHHHHHHHHHHhCCCE
Confidence 999 999999999999999 99999999998888888876 466899999999999 99999999999999999999999
Q ss_pred EEEEcccCCcccHHHHHHHhcc-----CCCCEEEEecCCccchhhhcCCCCCCcccccccCCCCCCCCCCHHHHHHHhhh
Q 010101 156 MKLEIAVDSITDLAPVFEMLTH-----CQVPLIALAVGSRGLISQLLGPKFGGFLVYGSLGGKSVPGLPTLVSLKQVYQL 230 (518)
Q Consensus 156 vKia~~~~~~~D~~~l~~~~~~-----~~~p~i~~~mG~~G~~sRi~~~~~gs~~ty~~~~~~sApGQ~~~~~l~~~~~~ 230 (518)
+|+|+||++..|+++++++..+ .+.|+|+|+||+.|++||+++++|||++||+++++++||||+++++++++++.
T Consensus 169 vKia~~a~~~~D~~~ll~~~~~~~~~~~~~P~i~~~MG~~G~~SRil~~~~GS~~ty~~~~~~sAPGQ~~~~el~~i~~~ 248 (253)
T PRK02412 169 VKIAVMPQSEQDVLTLLNATREMKELYADQPLITMSMGKLGRISRLAGEVFGSSWTFASLDKASAPGQISVEDLRRILEI 248 (253)
T ss_pred EEEEecCCCHHHHHHHHHHHHHHHhcCCCCCEEEEeCCCCchHHHcchhhhCCcceecCCCCCCCCCCCCHHHHHHHHHH
Confidence 9999999999999999998743 46899999999999999999999999999999999999999999999999886
Q ss_pred cc
Q 010101 231 EH 232 (518)
Q Consensus 231 ~~ 232 (518)
.+
T Consensus 249 l~ 250 (253)
T PRK02412 249 LH 250 (253)
T ss_pred hc
Confidence 54
No 13
>COG0710 AroD 3-dehydroquinate dehydratase [Amino acid transport and metabolism]
Probab=100.00 E-value=3.7e-51 Score=391.01 Aligned_cols=221 Identities=23% Similarity=0.390 Sum_probs=200.4
Q ss_pred CceEEEeecCCCHHHHHHHHHHHHhhCCCEEEEEeccCC-C-CcHHHHHHHhcC-CCCcEEEEeecCCCCCCCCCCcHHH
Q 010101 8 SLLVCTQLECETTEEMQASIEQAKVEGADLVELCIDSME-F-SHISEVDKLIQH-PTLPAIVSYRLKSSRKSSDEACKNT 84 (518)
Q Consensus 8 ~~~icv~l~~~~~~~~~~~~~~~~~~g~D~vElRlD~l~-~-~~~~~l~~l~~~-~~~PiI~T~R~~~eGG~~~~~~~~~ 84 (518)
+|+||+++.+.+..++.+++++++..++|++|||+|+|. . +..+....+++. ...|+|||+|+.+|||.|+++ +++
T Consensus 1 ~~~i~~~v~~~~~~~~~e~~~~~~~~~~Di~E~RvD~l~~~~~~~~~~~~~~e~~~~~~~IfT~R~~~EGG~~~~~-~~~ 79 (231)
T COG0710 1 MPKIIVPVVGLDIAELKEQAEKSKELDADIVELRVDLLESNVEVLEVAKALREKDPDKPLIFTFRTVKEGGEFPGS-EEE 79 (231)
T ss_pred CCEEEEEeecCCHHHHHHHHHHhhccCCCEEEEeechhcccchHHHHHHHHHHhccCCceEEEEeehhhcCCCCCC-HHH
Confidence 489999999999999999999999999999999999998 2 333445556653 467999999999999999999 999
Q ss_pred HHHHHHHHhhcC-CcEEEEecCCCCchhhHHHhhcCCCcEEEEeeecCCCCCCChhHHHHHHHHHHHcCCCEEEEEcccC
Q 010101 85 CLQVLRRALDLD-VEFVEMDYEVASDPLMSEIIYSRSNTKIIVSSYLNGGGKPTTEKLGDVIACMQATGADVMKLEIAVD 163 (518)
Q Consensus 85 ~~~ll~~~~~~g-~~yvDiEl~~~~~~~~~l~~~~~~~~kiI~S~H~f~~~tp~~~~l~~~~~~~~~~gadivKia~~~~ 163 (518)
|++++..+++.+ ++|||||+..+.+.++++...+ ...++|+||||| ++||+++++.+++.+|...|+||+|+|+||+
T Consensus 80 ~i~ll~~la~~~~~d~iDiEl~~~~~~~~~~~~~~-~~~~vI~SyH~F-~~TP~~~~i~~~l~km~~~~aDivKiAvm~~ 157 (231)
T COG0710 80 YIELLKKLAELNGPDYIDIELSSPEDDVKEIIKFA-KKHGVIVSYHDF-EKTPPLEEIIERLDKMESLGADIVKIAVMPQ 157 (231)
T ss_pred HHHHHHHHHhhcCCCEEEEEccCcchhHHHHHhcc-ccCCEEEEeccC-CCCCcHHHHHHHHHHHHhhCCCeEEEEecCC
Confidence 999999999976 9999999999988777777632 233499999999 9999999999999999999999999999999
Q ss_pred CcccHHHHHHHhcc---CCCCEEEEecCCccchhhhcCCCCCCcccccccCCCCCCCCCCHHHHHHHhhhc
Q 010101 164 SITDLAPVFEMLTH---CQVPLIALAVGSRGLISQLLGPKFGGFLVYGSLGGKSVPGLPTLVSLKQVYQLE 231 (518)
Q Consensus 164 ~~~D~~~l~~~~~~---~~~p~i~~~mG~~G~~sRi~~~~~gs~~ty~~~~~~sApGQ~~~~~l~~~~~~~ 231 (518)
+.+|++++++++.. ..+|+|+||||..|++||+++++|||++||+++++++||||++++++++++...
T Consensus 158 ~~~DvL~ll~~~~~~~~~~~p~i~i~MG~~G~~SRv~~~~~GS~~tya~~~~~sAPGQi~v~~l~~~~~~l 228 (231)
T COG0710 158 SKEDVLDLLEATREFKEAEKPVITISMGKTGKISRVAGPVFGSPITYASLDKPSAPGQISVDELRKILTLL 228 (231)
T ss_pred CHHHHHHHHHHHHhccccCCCEEEEecCCCCchhhhhHhhhCCceeEeecCCCCCCCCCCHHHHHHHHHHh
Confidence 99999999999875 689999999999999999999999999999999999999999999999987654
No 14
>TIGR01093 aroD 3-dehydroquinate dehydratase, type I. Type II 3-dehydroquinate dehydratase, designated AroQ, is described by TIGR01088.
Probab=100.00 E-value=1.5e-50 Score=394.66 Aligned_cols=214 Identities=29% Similarity=0.446 Sum_probs=192.6
Q ss_pred eEEEeecCCCHHHHHHHHHHHHhhCCCEEEEEeccCC-CCcH-------HHHHHHhcCCCCcEEEEeecCCCCCCCCCCc
Q 010101 10 LVCTQLECETTEEMQASIEQAKVEGADLVELCIDSME-FSHI-------SEVDKLIQHPTLPAIVSYRLKSSRKSSDEAC 81 (518)
Q Consensus 10 ~icv~l~~~~~~~~~~~~~~~~~~g~D~vElRlD~l~-~~~~-------~~l~~l~~~~~~PiI~T~R~~~eGG~~~~~~ 81 (518)
+||+||++++.+++..+++.+ ..|||+||||+|+|. .+.. +++..++ .++|+|||+|+++|||.++.+
T Consensus 1 ~i~v~~~~~~~~~~~~~~~~~-~~~aD~vElRlD~l~~~~~~~~~~~~~~~~~~~~--~~~piI~T~R~~~eGG~~~~~- 76 (228)
T TIGR01093 1 KIFVPLTAPDLEEALATAEKI-CKGADIVELRVDLLKDPSSNNDVDALIEQLSQLR--PDKPLIFTIRTISEGGKFPGN- 76 (228)
T ss_pred CEEEEccCCCHHHHHHHHHHh-ccCCCEEEEEechhcccCcHHHHHHHHHHHHHhc--CCCcEEEEECChhhCCCCCCC-
Confidence 589999999999999999886 789999999999997 3221 2233333 579999999999999999999
Q ss_pred HHHHHHHHHHH-hhcCCcEEEEecCCCCchhhHHHh-hcCCCcEEEEeeecCCCCCCChhHHHHHHHHHHHcCCCEEEEE
Q 010101 82 KNTCLQVLRRA-LDLDVEFVEMDYEVASDPLMSEII-YSRSNTKIIVSSYLNGGGKPTTEKLGDVIACMQATGADVMKLE 159 (518)
Q Consensus 82 ~~~~~~ll~~~-~~~g~~yvDiEl~~~~~~~~~l~~-~~~~~~kiI~S~H~f~~~tp~~~~l~~~~~~~~~~gadivKia 159 (518)
+++|++++..+ .+.++||||||++.+.+..+++.. ++++++|+|+||||| ++||+.+++.+++++|.++||||+|+|
T Consensus 77 ~~~~~~ll~~~~~~~~~d~vDiEl~~~~~~~~~l~~~~~~~~~kvI~S~H~f-~~tp~~~~l~~~~~~~~~~gaDivKia 155 (228)
T TIGR01093 77 EEEYLEELKRAADSPGPDFVDIELFLPDDAVKELINIAKKGGTKIIMSYHDF-QKTPSWEEIVERLEKALSYGADIVKIA 155 (228)
T ss_pred HHHHHHHHHHHHHhCCCCEEEEEccCCHHHHHHHHHHHHHCCCEEEEeccCC-CCCCCHHHHHHHHHHHHHhCCCEEEEE
Confidence 99999999998 577799999999999888887765 567899999999999 999999999999999999999999999
Q ss_pred cccCCcccHHHHHHHhccC----CCCEEEEecCCccchhhhcCCCCCCcccccccCCCCCCCCCCHHHHHHHh
Q 010101 160 IAVDSITDLAPVFEMLTHC----QVPLIALAVGSRGLISQLLGPKFGGFLVYGSLGGKSVPGLPTLVSLKQVY 228 (518)
Q Consensus 160 ~~~~~~~D~~~l~~~~~~~----~~p~i~~~mG~~G~~sRi~~~~~gs~~ty~~~~~~sApGQ~~~~~l~~~~ 228 (518)
+||++.+|+++|++++.+. ++|+|+|+||+.|++||+++++|||++||+++++++||||+++++++++|
T Consensus 156 ~~a~~~~D~~~ll~~~~~~~~~~~~p~i~~~MG~~G~~SRil~~~~gs~~t~~~~~~~sApGQ~~~~~l~~~~ 228 (228)
T TIGR01093 156 VMANSKEDVLTLLEITNKVDEHADVPLITMSMGDRGKISRVLGAVFGSVLTFGSLGKASAPGQISVDDLRELL 228 (228)
T ss_pred eccCCHHHHHHHHHHHHHHHhcCCCCEEEEeCCCCChhHhhccccccccceeccCCCCCCCCCcCHHHHHhhC
Confidence 9999999999999997543 57999999999999999999999999999999999999999999999864
No 15
>PF01487 DHquinase_I: Type I 3-dehydroquinase; InterPro: IPR001381 3-dehydroquinate dehydratase (4.2.1.10 from EC), or dehydroquinase, catalyzes the conversion of 3-dehydroquinate into 3-dehydroshikimate. It is the third step in the shikimate pathway for the biosynthesis of aromatic amino acids from chorismate. Two classes of dehydroquinases exist, known as types I and II. The best studied type I enzyme is from Escherichia coli (gene aroD) and related bacteria where it is a homodimeric protein. In fungi, dehydroquinase is part of a multifunctional enzyme which catalyzes five consecutive steps in the shikimate pathway. A histidine [] is involved in the catalytic mechanism.; GO: 0003855 3-dehydroquinate dehydratase activity; PDB: 2O7Q_A 2GPT_A 2O7S_A 1SFL_A 2OCZ_A 2OX1_C 1GQN_A 1QFE_B 1L9W_D 3L9C_A ....
Probab=100.00 E-value=1.5e-50 Score=394.03 Aligned_cols=216 Identities=31% Similarity=0.499 Sum_probs=185.4
Q ss_pred EEeecCCCHHHHHHHHHHHHhhCCCEEEEEeccCC-CC---cHHHHHHHhcCCCCcEEEEeecCCCCCCCCCCcHHHHHH
Q 010101 12 CTQLECETTEEMQASIEQAKVEGADLVELCIDSME-FS---HISEVDKLIQHPTLPAIVSYRLKSSRKSSDEACKNTCLQ 87 (518)
Q Consensus 12 cv~l~~~~~~~~~~~~~~~~~~g~D~vElRlD~l~-~~---~~~~l~~l~~~~~~PiI~T~R~~~eGG~~~~~~~~~~~~ 87 (518)
||||+++|.++++.+++++...|+|+||||+|+|. .+ ..+++..+++..++|+|||+|+++|||.+..+ +++|++
T Consensus 1 cv~l~~~~~~~~~~~~~~~~~~~~D~vElRlD~l~~~~~~~~~~~l~~lr~~~~~piI~T~R~~~eGG~~~~~-~~~~~~ 79 (224)
T PF01487_consen 1 CVPLTGSTLEELLAELEEAESSGADAVELRLDYLENDSAEDISEQLAELRRSLDLPIIFTVRTKEEGGRFQGS-EEEYLE 79 (224)
T ss_dssp EEEE--SSHHHHHHHHHHHHHTTTSEEEEEGGGSTTTSHHHHHHHHHHHHHHCTSEEEEE--BGGGTSSBSS--HHHHHH
T ss_pred CEeeCCCCHHHHHHHHHHHHhcCCCEEEEEeccccccChHHHHHHHHHHHHhCCCCEEEEecccccCCCCcCC-HHHHHH
Confidence 99999999999999999976669999999999998 22 34678888887899999999999999999999 999999
Q ss_pred HHHHHhhcCCcEEEEecCCCCchhhHHHhhcCCCcEEEEeeecCCCCCCChhHHHHHHHHHHHcCCCEEEEEcccCCccc
Q 010101 88 VLRRALDLDVEFVEMDYEVASDPLMSEIIYSRSNTKIIVSSYLNGGGKPTTEKLGDVIACMQATGADVMKLEIAVDSITD 167 (518)
Q Consensus 88 ll~~~~~~g~~yvDiEl~~~~~~~~~l~~~~~~~~kiI~S~H~f~~~tp~~~~l~~~~~~~~~~gadivKia~~~~~~~D 167 (518)
+++.+++.|++|||||++..++........+.++++||+||||| ++||+++++.+++++|.++||||+|+|+++++.+|
T Consensus 80 ll~~~~~~~~d~iDiE~~~~~~~~~~~~~~~~~~~~iI~S~H~f-~~tp~~~~l~~~~~~~~~~gadivKia~~~~~~~D 158 (224)
T PF01487_consen 80 LLERAIRLGPDYIDIELDLFPDDLKSRLAARKGGTKIILSYHDF-EKTPSWEELIELLEEMQELGADIVKIAVMANSPED 158 (224)
T ss_dssp HHHHHHHHTSSEEEEEGGCCHHHHHHHHHHHHTTSEEEEEEEES-S---THHHHHHHHHHHHHTT-SEEEEEEE-SSHHH
T ss_pred HHHHHHHcCCCEEEEEcccchhHHHHHHHHhhCCCeEEEEeccC-CCCCCHHHHHHHHHHHHhcCCCeEEEEeccCCHHH
Confidence 99999999999999999966554433333456899999999999 99999999999999999999999999999999999
Q ss_pred HHHHHHHhccC----CCCEEEEecCCccchhhhcCCCCCCcccccccCCCCCCCCCCHHHHHHHhh
Q 010101 168 LAPVFEMLTHC----QVPLIALAVGSRGLISQLLGPKFGGFLVYGSLGGKSVPGLPTLVSLKQVYQ 229 (518)
Q Consensus 168 ~~~l~~~~~~~----~~p~i~~~mG~~G~~sRi~~~~~gs~~ty~~~~~~sApGQ~~~~~l~~~~~ 229 (518)
+++|++++.+. +.|+|+|+||+.|++||++++.|||++||+..++++||||+++++++++|+
T Consensus 159 ~~~l~~~~~~~~~~~~~p~i~~~MG~~G~~SRi~~~~~Gs~~t~~~~~~~sApGQl~~~~l~~~~~ 224 (224)
T PF01487_consen 159 VLRLLRFTKEFREEPDIPVIAISMGELGRISRILNPIFGSVLTFASAGEASAPGQLTLEELREILH 224 (224)
T ss_dssp HHHHHHHHHHHHHHTSSEEEEEEETGGGHHHHHCHHHHTBSEEEEBSSS-SSTT-EBHHHHHHHHH
T ss_pred HHHHHHHHHHHhhccCCcEEEEEcCCCchhHHHHHhhhcCCcccCCCCCCCCCCCCcHHHHHHHhC
Confidence 99999997653 589999999999999999999999999999888899999999999999875
No 16
>cd00502 DHQase_I Type I 3-dehydroquinase, (3-dehydroquinate dehydratase or DHQase.) Catalyzes the cis-dehydration of 3-dehydroquinate via a covalent imine intermediate to produce dehydroshikimate. Dehydroquinase is the third enzyme in the shikimate pathway, which is involved in the biosynthesis of aromatic amino acids. Type I DHQase exists as a homodimer. Type II 3-dehydroquinase also catalyzes the same overall reaction, but is unrelated in terms of sequence and structure, and utilizes a completely different reaction mechanism.
Probab=100.00 E-value=1.3e-48 Score=380.64 Aligned_cols=214 Identities=32% Similarity=0.453 Sum_probs=193.4
Q ss_pred eEEEeecCC-CHHHHHHHHHHHHhhCCCEEEEEeccCC-C---CcHHHHHHHhcCCCCcEEEEeecCCCCCCCCCCcHHH
Q 010101 10 LVCTQLECE-TTEEMQASIEQAKVEGADLVELCIDSME-F---SHISEVDKLIQHPTLPAIVSYRLKSSRKSSDEACKNT 84 (518)
Q Consensus 10 ~icv~l~~~-~~~~~~~~~~~~~~~g~D~vElRlD~l~-~---~~~~~l~~l~~~~~~PiI~T~R~~~eGG~~~~~~~~~ 84 (518)
+||+||.++ +.++.+..++.. .|+|+||||+|+|. . +..+++..+++..+.|+|||+|+++|||.++.+ +++
T Consensus 1 ~i~~~i~~~~~~~e~~~~~~~~--~~aD~vElR~D~~~~~~~~~~~~~~~~lr~~~~~piI~T~R~~~eGG~~~~~-~~~ 77 (225)
T cd00502 1 KICVPLTGPDLLEEALSLLELL--LGADAVELRVDLLEDPSIDDVAEQLSLLRELTPLPIIFTVRTKSEGGNFEGS-EEE 77 (225)
T ss_pred CEEEEecCCCCHHHHHHHHHHh--cCCCEEEEEEeeccccchHHHHHHHHHHHHhCCCCEEEEEcccccCCCcCCC-HHH
Confidence 589999999 999988877653 29999999999998 3 234578888877779999999999999999999 999
Q ss_pred HHHHHHHHhhcCCcEEEEecCCCCchhhHHHh-hcCCCcEEEEeeecCCCCCCChhHHHHHHHHHHHcCCCEEEEEcccC
Q 010101 85 CLQVLRRALDLDVEFVEMDYEVASDPLMSEII-YSRSNTKIIVSSYLNGGGKPTTEKLGDVIACMQATGADVMKLEIAVD 163 (518)
Q Consensus 85 ~~~ll~~~~~~g~~yvDiEl~~~~~~~~~l~~-~~~~~~kiI~S~H~f~~~tp~~~~l~~~~~~~~~~gadivKia~~~~ 163 (518)
|+++++.++++|++|||||++. +.++++.. .+++++|+|+|||+| ++||+.+++.+++++|..+||||+|+|++|+
T Consensus 78 ~~~ll~~~~~~~~d~vDiEl~~--~~~~~~~~~~~~~~~kiI~S~H~f-~~tp~~~~l~~~~~~~~~~gadivKla~~~~ 154 (225)
T cd00502 78 YLELLEEALKLGPDYVDIELDS--ALLEELINSRKKGNTKIIGSYHDF-SGTPSDEELVSRLEKMAALGADIVKIAVMAN 154 (225)
T ss_pred HHHHHHHHHHHCCCEEEEEecc--hHHHHHHHHHHhCCCEEEEEeccC-CCCcCHHHHHHHHHHHHHhCCCEEEEEecCC
Confidence 9999999999999999999988 44555554 456899999999999 9999999999999999999999999999999
Q ss_pred CcccHHHHHHHhccC----CCCEEEEecCCccchhhhcCCCCCCcccccccCCCCCCCCCCHHHHHHHhh
Q 010101 164 SITDLAPVFEMLTHC----QVPLIALAVGSRGLISQLLGPKFGGFLVYGSLGGKSVPGLPTLVSLKQVYQ 229 (518)
Q Consensus 164 ~~~D~~~l~~~~~~~----~~p~i~~~mG~~G~~sRi~~~~~gs~~ty~~~~~~sApGQ~~~~~l~~~~~ 229 (518)
+.+|++++++++.+. ++|+|+|+||+.|++||++++.|||++||+++++++||||+++++++++|.
T Consensus 155 ~~~D~~~ll~~~~~~~~~~~~p~i~~~MG~~G~~SRil~~~~gs~~t~~~~~~~sApGQ~~~~~l~~~~~ 224 (225)
T cd00502 155 SIEDNLRLLKFTRQVKNLYDIPLIAINMGELGKLSRILSPVFGSPLTYASLPEPSAPGQLSVEELKQALS 224 (225)
T ss_pred CHHHHHHHHHHHHHHHhcCCCCEEEEEcCCCCchhhccccccCCcccccCCCCCCCCCCcCHHHHHHHHh
Confidence 999999999997654 469999999999999999999999999999999999999999999998875
No 17
>PRK13575 3-dehydroquinate dehydratase; Provisional
Probab=100.00 E-value=1.3e-48 Score=380.61 Aligned_cols=219 Identities=20% Similarity=0.351 Sum_probs=184.0
Q ss_pred ceEEEeecCCC-HHHH-HHHHHHHHhhCCCEEEEEeccCC-CCcH---HHHHHHhc-CCCCcEEEEeecCCCCCCCCCCc
Q 010101 9 LLVCTQLECET-TEEM-QASIEQAKVEGADLVELCIDSME-FSHI---SEVDKLIQ-HPTLPAIVSYRLKSSRKSSDEAC 81 (518)
Q Consensus 9 ~~icv~l~~~~-~~~~-~~~~~~~~~~g~D~vElRlD~l~-~~~~---~~l~~l~~-~~~~PiI~T~R~~~eGG~~~~~~ 81 (518)
+.|++++.... ..+. ..+++.+ ..+||+||||+|+|. .+.. +.+..+++ ..+.|+|||+|+++|||.++++
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~D~vElRlD~l~~~~~~~~~~~i~~l~~~~~~~p~I~T~Rt~~EGG~~~~~- 81 (238)
T PRK13575 4 VEVAATIAPQLSIEETLIQKINHR-IDAIDIIELRIDQWENVTVDQLAEMITKLKVLQDSFKLLVTYRTKLQGGYGQFT- 81 (238)
T ss_pred eeEeeeeccccccchhHHHHHHhc-CCCCCEEEEEeccccCCCHHHHHHHHHHHHhhcCCCCEEEEeCChhhCCCCCCC-
Confidence 34556666553 5554 4444443 478999999999998 4432 23344444 2579999999999999999999
Q ss_pred HHHHHHHHHHHhhcC-CcEEEEecCC--CCchhhHHHh-hcCCCcEEEEeeecCCCCCCChhHHHHHHHHHHHcCCCEEE
Q 010101 82 KNTCLQVLRRALDLD-VEFVEMDYEV--ASDPLMSEII-YSRSNTKIIVSSYLNGGGKPTTEKLGDVIACMQATGADVMK 157 (518)
Q Consensus 82 ~~~~~~ll~~~~~~g-~~yvDiEl~~--~~~~~~~l~~-~~~~~~kiI~S~H~f~~~tp~~~~l~~~~~~~~~~gadivK 157 (518)
+++|+++++.++..+ +||||||++. ..+..+++.. .++.++++|+||||| ++||+.+++.+++++|.++||||+|
T Consensus 82 ~~~~~~ll~~~~~~~~~d~vDiE~~~~~~~~~~~~l~~~~~~~~~~vI~S~H~F-~~TP~~~~l~~~~~~m~~~gaDi~K 160 (238)
T PRK13575 82 NDLYLNLLSDLANINGIDMIDIEWQADIDIEKHQRLITHLQQYNKEVVISHHNF-ESTPPLDELKFIFFKMQKFNPEYVK 160 (238)
T ss_pred HHHHHHHHHHHHHhCCCCEEEEEcccCCChHHHHHHHHHHHHcCCEEEEecCCC-CCCCCHHHHHHHHHHHHHhCCCEEE
Confidence 999999998888765 8999999986 3445556654 566899999999999 9999999999999999999999999
Q ss_pred EEcccCCcccHHHHHHHhcc----CCCCEEEEecCCccchhhhcCCCCCCcccccccCCCCCCCCCCHHHHHHHhhh
Q 010101 158 LEIAVDSITDLAPVFEMLTH----CQVPLIALAVGSRGLISQLLGPKFGGFLVYGSLGGKSVPGLPTLVSLKQVYQL 230 (518)
Q Consensus 158 ia~~~~~~~D~~~l~~~~~~----~~~p~i~~~mG~~G~~sRi~~~~~gs~~ty~~~~~~sApGQ~~~~~l~~~~~~ 230 (518)
||+||++.+|+++|++++.+ .+.|+|+|+||+.|++||+++++|||++||+++++++||||++++++++++.+
T Consensus 161 iAv~~~~~~Dvl~Ll~~~~~~~~~~~~p~i~i~MG~~G~iSRi~~~~~GS~~Tya~l~~~sAPGQi~v~~l~~i~~~ 237 (238)
T PRK13575 161 LAVMPHNKNDVLNLLQAMSTFSDTMDCKVVGISMSKLGLISRTAQGVFGGALSYGCIGEPQAPGQIHVTDLKAQVTL 237 (238)
T ss_pred EEecCCCHHHHHHHHHHHHHHHhccCCCEEEEeCCCCCchhhcchhhhCCceEecCCCCCCCCCCCCHHHHHHHHHh
Confidence 99999999999999998654 35799999999999999999999999999999999999999999999998764
No 18
>PRK13576 3-dehydroquinate dehydratase; Provisional
Probab=100.00 E-value=9.9e-47 Score=360.63 Aligned_cols=203 Identities=16% Similarity=0.159 Sum_probs=172.4
Q ss_pred CCceEEEeecCCCHHHHHHHHHHHHhhCCCEEEEEeccCC-CCcHHHHHHHhcCCCCcEEEEeecCCCCCCCCCCcHHHH
Q 010101 7 NSLLVCTQLECETTEEMQASIEQAKVEGADLVELCIDSME-FSHISEVDKLIQHPTLPAIVSYRLKSSRKSSDEACKNTC 85 (518)
Q Consensus 7 ~~~~icv~l~~~~~~~~~~~~~~~~~~g~D~vElRlD~l~-~~~~~~l~~l~~~~~~PiI~T~R~~~eGG~~~~~~~~~~ 85 (518)
+.|+||+||++++.++++.+.+. .|+|+||||+|+|. .+.. +..+++....|+|||+|+++|||.++++ +++|
T Consensus 1 ~~p~i~vpi~~~~~e~i~~~~~~---~~aD~vE~RlD~l~~~~~~--~~~~l~~~~~plI~T~R~~~EGG~~~~~-~~~r 74 (216)
T PRK13576 1 MRPLIVASLPIKKIEDLKLIGNF---LDADLIELRLDYLKDREVS--VIEFLDKYKDKLIVTLRDKAEGGINELD-DELK 74 (216)
T ss_pred CCCEEEEEeCCCCHHHHHHHHhc---CCCCEEEEEeccccccchh--HHHHHHhcCCCEEEEeCChHHCCCCcCC-HHHH
Confidence 46899999999999999887533 58999999999998 3322 2223333457999999999999999999 9999
Q ss_pred HHHHHHHhhcCCcEEEEecCCCCchhhHHHhhcCCCcEEEEeeecCCCCCCChhHHHHHHHHHHHcCCCEEEEEcccCCc
Q 010101 86 LQVLRRALDLDVEFVEMDYEVASDPLMSEIIYSRSNTKIIVSSYLNGGGKPTTEKLGDVIACMQATGADVMKLEIAVDSI 165 (518)
Q Consensus 86 ~~ll~~~~~~g~~yvDiEl~~~~~~~~~l~~~~~~~~kiI~S~H~f~~~tp~~~~l~~~~~~~~~~gadivKia~~~~~~ 165 (518)
+++++.+++.+. ++|||++...+.. ..+.++|+||||| ++||+.++|.+++++|.+ ||||+|+|+||++.
T Consensus 75 ~~ll~~~~~~~~-~vDiE~~~a~~~~-------~~~~~vI~S~HdF-~~TP~~~eL~~~l~~m~~-gaDI~KiA~mp~~~ 144 (216)
T PRK13576 75 ISLLKELYDKQF-LYDVEASFLQKYN-------VPYDNKIVSIHYF-DYLPTSEEVKEIVSKFYE-KAFSVKIAVLGLKG 144 (216)
T ss_pred HHHHHHHHHhCC-eEEEEcchhhhcC-------CCCCeEEEEECCC-CCCcCHHHHHHHHHHHHh-cCCEEEEEeCCCCc
Confidence 999999999985 7799998544321 1246799999999 999999999999999987 99999999999986
Q ss_pred -ccHH-HHHHHhccCCCCEEEEecCCccchhhhcCCCCCCcccccccCCCCCCCCCCHHHHHHHhhhc
Q 010101 166 -TDLA-PVFEMLTHCQVPLIALAVGSRGLISQLLGPKFGGFLVYGSLGGKSVPGLPTLVSLKQVYQLE 231 (518)
Q Consensus 166 -~D~~-~l~~~~~~~~~p~i~~~mG~~G~~sRi~~~~~gs~~ty~~~~~~sApGQ~~~~~l~~~~~~~ 231 (518)
.|++ +|+. .. .+++|+||+.| +||+++++|||++||+++++++||||+++++++++|+..
T Consensus 145 ~~d~l~~Ll~---~~--~~i~~~MG~~G-iSRi~~~~fGS~lTy~~~~~~sAPGQi~v~~l~~i~~~l 206 (216)
T PRK13576 145 YKEVLLPLLE---YE--NVTVMPMSVNP-LERIAFSLLGSKLIYSYAIEPTAQGQLHYKKVKQILNYL 206 (216)
T ss_pred hHhHHHHHhc---cc--CccEEEcCCcc-HHHHHHHHhCCeeEEEecCCCCCCCCccHHHHHHHHHHH
Confidence 7665 6654 22 45889999999 999999999999999999999999999999999999865
No 19
>PRK01261 aroD 3-dehydroquinate dehydratase; Provisional
Probab=100.00 E-value=2.2e-42 Score=333.84 Aligned_cols=203 Identities=14% Similarity=0.222 Sum_probs=169.6
Q ss_pred ccCCceEEEeecCCCHHHHHHHHHHHHhhCCCEEEEEeccCC-CCcH--HHHHHHhcCCCCcEEEEeecCCCCCCCCCCc
Q 010101 5 AKNSLLVCTQLECETTEEMQASIEQAKVEGADLVELCIDSME-FSHI--SEVDKLIQHPTLPAIVSYRLKSSRKSSDEAC 81 (518)
Q Consensus 5 ~~~~~~icv~l~~~~~~~~~~~~~~~~~~g~D~vElRlD~l~-~~~~--~~l~~l~~~~~~PiI~T~R~~~eGG~~~~~~ 81 (518)
-.+.|+||+||++++.+|++.+++.+...|||+||||+|+|. ++.. ..+....+..++|+|||+|+. +
T Consensus 17 g~~~p~Icvpi~~~~~ee~~~~~~~~~~~~aDivE~RlD~l~~~~~~~~~~~~~~l~~~~~p~I~T~R~~--------~- 87 (229)
T PRK01261 17 GNMQPIVVESIFFKDIKEMKERFKTKVLSDKNLYEIRFDLFHDHSIESEPEIISALNEMDIDYIFTYRGV--------D- 87 (229)
T ss_pred CCCCcEEEEEeCCCCHHHHHHHHHHhhcCCCCEEEEEeeccCCCChHHHHHHHHHHhhcCCCEEEEEcCC--------C-
Confidence 346799999999999999999998877789999999999997 4432 122222333489999999942 2
Q ss_pred HHHHHHHHHHHhhcCCcEEEEecCCCCchhhHHHhhcCCCcEEEEeeecCCCCCCChhHHHHHHHHHHHcCCCEEEEEcc
Q 010101 82 KNTCLQVLRRALDLDVEFVEMDYEVASDPLMSEIIYSRSNTKIIVSSYLNGGGKPTTEKLGDVIACMQATGADVMKLEIA 161 (518)
Q Consensus 82 ~~~~~~ll~~~~~~g~~yvDiEl~~~~~~~~~l~~~~~~~~kiI~S~H~f~~~tp~~~~l~~~~~~~~~~gadivKia~~ 161 (518)
+ .++++.+++.++||||||++...++ ..+..++|+|+||| ||+.+++.+++++|.++||||+|+|+|
T Consensus 88 ~---~~~l~~a~~~~~d~vDIEl~~~~~~-----~~~~~~~kvIvS~H-----tp~~eeL~~~l~~m~~~gaDI~KiAvm 154 (229)
T PRK01261 88 A---RKYYETAIDKMPPAVDLDINLIGKL-----EFRPRNTMLMVSYH-----TNNSDNMPAILDIMNEKNPDYVKVACN 154 (229)
T ss_pred H---HHHHHHHHhhCCCEEEEEcccchhh-----hhhcCCCeEEEEeC-----CCCHHHHHHHHHHHHHhCCCEEEEEeC
Confidence 3 3678888887799999999874332 23457999999999 458899999999999999999999999
Q ss_pred cCCcccHHHHHHH----hccCCCCEEEEecCCccchhhhcCCCCCCcccccccCCCCCCCCCCHHHHHHHhhhc
Q 010101 162 VDSITDLAPVFEM----LTHCQVPLIALAVGSRGLISQLLGPKFGGFLVYGSLGGKSVPGLPTLVSLKQVYQLE 231 (518)
Q Consensus 162 ~~~~~D~~~l~~~----~~~~~~p~i~~~mG~~G~~sRi~~~~~gs~~ty~~~~~~sApGQ~~~~~l~~~~~~~ 231 (518)
|++.+|++.++.. ..+.+.|+|+|+||+ ++||+++++|||++||+++++++||||+++++++++++..
T Consensus 155 p~~~~Dvl~~l~~~~~~~~~~~~p~i~isMG~--~iSRi~~~~fGS~lTyas~~~~sAPGQi~v~~l~~~~~~~ 226 (229)
T PRK01261 155 YNDNKKFVDDLQYILMKKDEKYKPIVFIPMGR--EFLRIFSGYYVSDIVYARYDNETAPGQPKRDYYESAFIKY 226 (229)
T ss_pred CCChHHHHHHHHHHHHHHhcCCCCEEEEECCc--HHHHHHHHHHCCceEEeeCCCCCCCCCCCHHHHHHHHHHh
Confidence 9999998776643 344578999999999 9999999999999999999999999999999999998753
No 20
>KOG0692 consensus Pentafunctional AROM protein [Amino acid transport and metabolism]
Probab=100.00 E-value=3.2e-39 Score=327.28 Aligned_cols=435 Identities=14% Similarity=0.057 Sum_probs=355.8
Q ss_pred CCCcEEEEeecCCCCCC---CCCCcHHHHHHHHHHHhhcCCcEEEEecCCCCchhhHHHhhcCCCcEEEEeeecCCCCCC
Q 010101 60 PTLPAIVSYRLKSSRKS---SDEACKNTCLQVLRRALDLDVEFVEMDYEVASDPLMSEIIYSRSNTKIIVSSYLNGGGKP 136 (518)
Q Consensus 60 ~~~PiI~T~R~~~eGG~---~~~~~~~~~~~ll~~~~~~g~~yvDiEl~~~~~~~~~l~~~~~~~~kiI~S~H~f~~~tp 136 (518)
+.+|.+++.|..||||. .++. +.++..-+...++++.+|+|.+++...++...+.....+..++|.+.|++ +.+|
T Consensus 148 sal~~L~~~~~~we~~~~~vveG~-gg~~~~~~~~~~eLylgnagta~r~lt~~aa~v~~k~~~k~~Vl~g~hrm-q~rP 225 (595)
T KOG0692|consen 148 SALKTLGLNVETWEENNRAVVEGC-GGEFSIDSKSDIELYLGNAGTAMRPLTEFAAAVTAKGGNKSYVLDGVHRM-QERP 225 (595)
T ss_pred hhHHHhccccceecCCCEEEEEcC-CCeeeechhhhhhhccCccchhhhhHHHHHHHhhcCCCCceEEEecCccc-ccCC
Confidence 57899999999999998 6766 66666667777899999999999988777766654444555999999999 9999
Q ss_pred ChhHHHHHHHHHHHcCCCEEEEEcccCCcccHHHHHHHhccCCCCEEEEecCCccchhhhcCCCCCCcccccccCCC--C
Q 010101 137 TTEKLGDVIACMQATGADVMKLEIAVDSITDLAPVFEMLTHCQVPLIALAVGSRGLISQLLGPKFGGFLVYGSLGGK--S 214 (518)
Q Consensus 137 ~~~~l~~~~~~~~~~gadivKia~~~~~~~D~~~l~~~~~~~~~p~i~~~mG~~G~~sRi~~~~~gs~~ty~~~~~~--s 214 (518)
+-.+...+++.||||.|++.+...+-|+. ....++..++|+++.-||+.+..+|+++|+++.++|+..++.. +
T Consensus 226 ----i~~LV~~l~q~GadI~~~~~t~~~p~dv~-~~~~~~gg~v~l~g~Vssqy~~~~lm~ap~a~g~vt~~~vdgk~iS 300 (595)
T KOG0692|consen 226 ----IGDLVVGLKQLGADIECTLGTNCPPVDVN-ANGGLPGGKVKLSGSVSSQYLTALLMCAPLALGDVTIEIVDGKLIS 300 (595)
T ss_pred ----chHHHHHHHhcCCceEEeccCCCCceeee-ccCCCcCceeeeeeeehhhHHHHHHHhhhhcCCceEEEeecCcccc
Confidence 77788888999999999999999999997 5556677789999999999999999999999999999999854 9
Q ss_pred CCCCCCHHHHHHHh--hhccCCCCceEEEEecCCCCcccCHHHHHHHHHHcCCCceEEecccCcHHHHHHHhcCCCCCEE
Q 010101 215 VPGLPTLVSLKQVY--QLEHINPDTKIFGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLVDDVKEFFRTYSGTDFAGF 292 (518)
Q Consensus 215 ApGQ~~~~~l~~~~--~~~~~~~~t~~~~liG~pi~hS~SP~~hn~~f~~~gl~~~y~~~~~~~l~~~~~~l~~~~~~G~ 292 (518)
+|+|...-.|.+.| ++.+..+.+++|++.|.|.+|+.+|.+||.+|.+.-.++.|...-++..-.++......++.||
T Consensus 301 ~pyv~mt~~lme~fgvn~~~s~~~~~~y~i~g~~y~~p~~~~ve~dAssa~yfla~aa~tg~~~tV~~~g~~Slqgda~F 380 (595)
T KOG0692|consen 301 VPYVEMTLKLMERFGVNVEHSTSWDRFYVIGGQKYKSPGNAYVEGDASSASYFLAGAAITGETVTVEGCGTTSLQGDAKF 380 (595)
T ss_pred ccchhHHHHHHHHhCcCeEecCCCcceEeccCcccCCCCCceeecccccccccceeeeEecceeeeccccceecccccch
Confidence 99999999999999 8899999999999999999999999999999999999999887766655555554445688999
Q ss_pred E-ecccchHHHHhcccccChhhhhcCceeEEEEeccCCeEEEeecCHHHHHHHHHHHHHhhccCCCCCCCCcccCCcEEE
Q 010101 293 S-VGIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALRERQGINGVASHTSPIAGKIFV 371 (518)
Q Consensus 293 ~-VT~P~K~~v~~~~d~~~~~A~~iGavNTi~~~~~~g~l~G~NTD~~G~~~~l~~~l~~~~~~~~~~~~~~~l~~k~vl 371 (518)
+ |+.|||.++...+|++++.+.-+||+|++.++..|+...++|||..|-+.++...++..+++-+.+......-.+...
T Consensus 381 a~vl~pmgc~v~qt~~svtv~gp~~ga~~~~~lr~iD~m~~m~d~~~t~svvA~~~~~~s~gdptti~~~as~rvket~r 460 (595)
T KOG0692|consen 381 AEVLEPMGCKVSQTENSVTVTGPPRGAFGMRHLRAIDVMNKMPDVAMTLSVVALFAGLRSSGDPTTIRDVASWRVKETER 460 (595)
T ss_pred HhhhccccceeeeecccccccCCCCCcccceehhhhcccccccchhHhHhHHHHhhcccCCCCCcccccccchhHHHHHH
Confidence 9 999999999999999999999999999998775578999999999999999876554322200000000112235678
Q ss_pred EEccchhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHhcCcccccccccccCCCCccEEEEcCCCCCCCCCCCCCCChh
Q 010101 372 LVGAGGAGRALAFGAKSRGARVIIFNRNYERAKALADAVSGEALHFEYLHEFFPEKGMILANASAIGMEPNSDQSPVPKE 451 (518)
Q Consensus 372 vlGaGg~araia~~L~~~G~~v~i~nRt~~ka~~la~~~~~~~~~~~~l~~~~~~~~divInatp~g~~~~~~~~~~~~~ 451 (518)
|+|.|+..++..+...+.+..++|.+|+ +|+-++++..+. .+++| ......+.++-++++.+ +.+.+.+....
T Consensus 461 ~ia~~~el~klg~~~~E~~dg~~v~~~~-~k~lk~ae~~g~--~TydD--hr~am~fsvLA~~~~~~--~~i~d~~ct~k 533 (595)
T KOG0692|consen 461 MIAICTELRKLGATVEEGSDGYCVITPP-EKKLKLAEIDGS--LTYDD--HRMAMAFSVLAACADVP--ITINDPGCTRK 533 (595)
T ss_pred HHHHHHHHHHhcccccccCceEEEeCCc-hHhccchhhccc--ccccc--ccchhhhhHHHhccCCC--ccccCCCcccc
Confidence 9999999999999888888789999999 888888876531 12222 22345667778888766 55555556666
Q ss_pred hhcCCCEEEEEeeCCCchHHHHHHHHCCCeeeccHHHHHHHHHHHHHHhcCCCCCHHHHHH
Q 010101 452 ALKAYELVFDAVYTPRNTRLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRK 512 (518)
Q Consensus 452 ~l~~~~~v~Di~Y~P~~T~ll~~A~~~G~~~i~G~~ml~~Qa~~qf~lw~g~~~p~~~~~~ 512 (518)
.++....|+|-+|.|+-|.+ ++.+.|.... .+|++-|+.+||+.++|+++|.++-.+
T Consensus 534 t~p~y~~Vl~~~~~~kltga--eple~~a~kn--ssm~vigmr~agkttigk~~akeL~~k 590 (595)
T KOG0692|consen 534 TFPDYFQVLERITKHKLTGA--EPLESGAIKN--SSMFVIGMREAGKTTIGKPAAKELYWK 590 (595)
T ss_pred ccchHHHHHHHHhhcccccc--Chhhcccccc--ceeeeehhhhcCceecCccchHHhCee
Confidence 66666779999999999977 7888887655 999999999999999999999887554
No 21
>PF08501 Shikimate_dh_N: Shikimate dehydrogenase substrate binding domain; InterPro: IPR013708 This domain is the substrate binding domain of shikimate dehydrogenase []. Shikimate dehydrogenase catalyses the fourth step of the mycobacterial Shikimate pathway, which results in the biosynthesis of chorismate. Chorismate is a precursor of aromatic amino acids, naphthoquinones, menaquinones and mycobactins [, ]. This pathway is an important target for antibacterial agents, especially against Mycobacterium tuberculosis, since it does not occur in mammals.; GO: 0004764 shikimate 3-dehydrogenase (NADP+) activity, 0055114 oxidation-reduction process; PDB: 3U62_A 2EGG_A 1P74_B 1P77_A 3O8Q_A 3TNL_C 3TOZ_G 1NYT_C 1VI2_B 1NPD_A ....
Probab=99.95 E-value=2.9e-28 Score=199.72 Aligned_cols=81 Identities=41% Similarity=0.836 Sum_probs=75.1
Q ss_pred EecCCCCcccCHHHHHHHHHHcCCCceEEecccC--cHHHHHHHhcCCCCCEEEecccchHHHHhcccccChhhhhcCce
Q 010101 242 LVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLVD--DVKEFFRTYSGTDFAGFSVGIPHKEPAVACCDEVHPLAKSIGAV 319 (518)
Q Consensus 242 liG~pi~hS~SP~~hn~~f~~~gl~~~y~~~~~~--~l~~~~~~l~~~~~~G~~VT~P~K~~v~~~~d~~~~~A~~iGav 319 (518)
|||+||+||+||.|||++|+++|+|+.|.+++++ +++++++.++..+|.|+|||||||+++++|+|++|+.|+.+|||
T Consensus 1 viG~pi~hS~SP~~hn~~f~~~g~~~~Y~~~~v~~~~l~~~~~~~~~~~~~G~~VT~P~K~~~~~~~D~~~~~A~~igAv 80 (83)
T PF08501_consen 1 VIGNPISHSLSPLIHNAAFEALGLDAVYIPFEVEPEDLEDFLDALRAPNFRGLNVTMPHKEAAIPYLDELSPSAKAIGAV 80 (83)
T ss_dssp EEESSSTT-SHHHHHHHHHHHTTSSEEEEEEETSTTCHHHHHHHHHHTTESEEEE-TTSTTHHGGGSSEE-HHHHHHTS-
T ss_pred CcCCCcccccCHHHHHHHHHHcCCCcEEEEeecCHHHHHHHHHHHhcCCCCeeeecchHHHHHHHHhccCCHHHHHhCCc
Confidence 7999999999999999999999999999999996 99999999988999999999999999999999999999999999
Q ss_pred eEE
Q 010101 320 NTI 322 (518)
Q Consensus 320 NTi 322 (518)
|||
T Consensus 81 Ntv 83 (83)
T PF08501_consen 81 NTV 83 (83)
T ss_dssp SEE
T ss_pred ccC
Confidence 997
No 22
>PRK14192 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=99.91 E-value=7.8e-24 Score=211.60 Aligned_cols=214 Identities=23% Similarity=0.340 Sum_probs=165.8
Q ss_pred EEEecCCCCcccCHHHHHHHHHHcCCCceEEec--cc--CcHHHHHHHhcC-CCCCEEEecccchHHHHh--cccccChh
Q 010101 240 FGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPM--LV--DDVKEFFRTYSG-TDFAGFSVGIPHKEPAVA--CCDEVHPL 312 (518)
Q Consensus 240 ~~liG~pi~hS~SP~~hn~~f~~~gl~~~y~~~--~~--~~l~~~~~~l~~-~~~~G~~VT~P~K~~v~~--~~d~~~~~ 312 (518)
.-++|+.-+--.--.+|+++|+++|++..|.++ ++ +++.+.++.++. .++.|++||+|||+.+.+ ++|++ +.
T Consensus 38 ~i~vg~~~~s~~Y~~~~~~~~~~~Gi~~~~~~l~~~~~~~~l~~~i~~Ln~d~~v~Gi~VqlPlp~~i~~~~~ld~I-~~ 116 (283)
T PRK14192 38 TILVGDDPASATYVRMKGNACRRVGMDSLKVELPQETTTEQLLAKIEELNANPDVHGILLQHPVPAQIDERACFDAI-SL 116 (283)
T ss_pred EEEeCCChhHHHHHHHHHHHHHHcCCeEEEEECCCCCCHHHHHHHHHHHhCCCCCCEEEEeCCCccccCHHHHHhcc-CH
Confidence 345564433333446999999999999999999 55 368888888854 489999999999999999 99999 99
Q ss_pred hhhcCceeEEEEeccCCe------EEEeecCHHHHHHHHHHHHHhhccCCCCCCCCcccCCcEEEEEccch-hHHHHHHH
Q 010101 313 AKSIGAVNTIIRRPIDGK------LVGYNTDCESAISAIEDALRERQGINGVASHTSPIAGKIFVLVGAGG-AGRALAFG 385 (518)
Q Consensus 313 A~~iGavNTi~~~~~~g~------l~G~NTD~~G~~~~l~~~l~~~~~~~~~~~~~~~l~~k~vlvlGaGg-~araia~~ 385 (518)
++.++++||+ + .|+ ++|+||| .||++.|+.. + .+++||+++|+|+|| +||++++.
T Consensus 117 aKDVdg~n~~-n---~G~l~~~~~~~~p~T~-~gii~~L~~~-----~--------i~l~Gk~vvViG~gg~vGkpia~~ 178 (283)
T PRK14192 117 AKDVDGVTCL-G---FGRMAMGEAAYGSATP-AGIMRLLKAY-----N--------IELAGKHAVVVGRSAILGKPMAMM 178 (283)
T ss_pred HHhcCCCCcc-c---cCccccCCCcccCCcH-HHHHHHHHHc-----C--------CCCCCCEEEEECCcHHHHHHHHHH
Confidence 9999999999 3 466 8999999 9999998751 2 578999999999999 99999999
Q ss_pred HHHCCCeEEEEeCCHHHHHHHHHHhcCcccccccccccCCCCccEEEEcCCCCCCCCCCCCCCChhhhcCCCEEEEEeeC
Q 010101 386 AKSRGARVIIFNRNYERAKALADAVSGEALHFEYLHEFFPEKGMILANASAIGMEPNSDQSPVPKEALKAYELVFDAVYT 465 (518)
Q Consensus 386 L~~~G~~v~i~nRt~~ka~~la~~~~~~~~~~~~l~~~~~~~~divInatp~g~~~~~~~~~~~~~~l~~~~~v~Di~Y~ 465 (518)
|.+.|+.|++++| +++.|++.+ .++|+|||||+ .|. +++.++++++.+|+|+.|+
T Consensus 179 L~~~gatVtv~~~---~t~~L~~~~---------------~~aDIvI~AtG---~~~----~v~~~~lk~gavViDvg~n 233 (283)
T PRK14192 179 LLNANATVTICHS---RTQNLPELV---------------KQADIIVGAVG---KPE----LIKKDWIKQGAVVVDAGFH 233 (283)
T ss_pred HHhCCCEEEEEeC---CchhHHHHh---------------ccCCEEEEccC---CCC----cCCHHHcCCCCEEEEEEEe
Confidence 9999999999999 344444432 46899999994 232 5788899999999999999
Q ss_pred CC------chHHHHHHHHC-C-Ce-eeccH-----HHHHHHHHHHHH
Q 010101 466 PR------NTRLLREAAEV-G-AT-VVSGV-----EMFIRQALGQFR 498 (518)
Q Consensus 466 P~------~T~ll~~A~~~-G-~~-~i~G~-----~ml~~Qa~~qf~ 498 (518)
|. +-.+ +.+++. . +. +=.|. -||+...+.+++
T Consensus 234 ~~~~~~~GDvd~-~~~~~~a~~itPvPGGVGp~T~a~L~~n~~~~~~ 279 (283)
T PRK14192 234 PRDGGGVGDIEL-QGIEEIASAYTPVPGGVGPMTINTLIRQTVEAAE 279 (283)
T ss_pred ecCCCCcccccH-HHhhccceEeCCCCCcChHHHHHHHHHHHHHHHH
Confidence 94 2322 223322 2 22 22343 477777766654
No 23
>cd01065 NAD_bind_Shikimate_DH NAD(P) binding domain of Shikimate dehydrogenase. Shikimate dehydrogenase (DH) is an amino acid DH family member. Shikimate pathway links metabolism of carbohydrates to de novo biosynthesis of aromatic amino acids, quinones and folate. It is essential in plants, bacteria, and fungi but absent in mammals, thus making enzymes involved in this pathway ideal targets for broad spectrum antibiotics and herbicides. Shikimate DH catalyzes the reduction of 3-hydroshikimate to shikimate using the cofactor NADH. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann
Probab=99.91 E-value=4.8e-23 Score=188.62 Aligned_cols=152 Identities=39% Similarity=0.667 Sum_probs=126.5
Q ss_pred cCHHHHHHHHHHHHHhhccCCCCCCCCcccCCcEEEEEccchhHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHHhcCcc
Q 010101 336 TDCESAISAIEDALRERQGINGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGA-RVIIFNRNYERAKALADAVSGEA 414 (518)
Q Consensus 336 TD~~G~~~~l~~~l~~~~~~~~~~~~~~~l~~k~vlvlGaGg~araia~~L~~~G~-~v~i~nRt~~ka~~la~~~~~~~ 414 (518)
|||.||.+++++. + .++++++++|+|+|++|++++.+|.+.|. +|++++|+.++++++++.++...
T Consensus 1 td~~g~~~a~~~~-----~--------~~~~~~~i~iiG~G~~g~~~a~~l~~~g~~~v~v~~r~~~~~~~~~~~~~~~~ 67 (155)
T cd01065 1 TDGLGFVRALEEA-----G--------IELKGKKVLILGAGGAARAVAYALAELGAAKIVIVNRTLEKAKALAERFGELG 67 (155)
T ss_pred CCHHHHHHHHHhh-----C--------CCCCCCEEEEECCcHHHHHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHhhcc
Confidence 8999999998752 1 34678999999999999999999999875 99999999999999998876431
Q ss_pred --cccccccccCCCCccEEEEcCCCCCCCCCCCCCCChhhhcCCCEEEEEeeCCCchHHHHHHHHCCCeeeccHHHHHHH
Q 010101 415 --LHFEYLHEFFPEKGMILANASAIGMEPNSDQSPVPKEALKAYELVFDAVYTPRNTRLLREAAEVGATVVSGVEMFIRQ 492 (518)
Q Consensus 415 --~~~~~l~~~~~~~~divInatp~g~~~~~~~~~~~~~~l~~~~~v~Di~Y~P~~T~ll~~A~~~G~~~i~G~~ml~~Q 492 (518)
....+..+ ...++|+||++||.+..+ ....++....++++.+++|++|.|..|++.+++++.|+.+++|++||++|
T Consensus 68 ~~~~~~~~~~-~~~~~Dvvi~~~~~~~~~-~~~~~~~~~~~~~~~~v~D~~~~~~~~~l~~~~~~~g~~~v~g~~~~~~q 145 (155)
T cd01065 68 IAIAYLDLEE-LLAEADLIINTTPVGMKP-GDELPLPPSLLKPGGVVYDVVYNPLETPLLKEARALGAKTIDGLEMLVYQ 145 (155)
T ss_pred cceeecchhh-ccccCCEEEeCcCCCCCC-CCCCCCCHHHcCCCCEEEEcCcCCCCCHHHHHHHHCCCceeCCHHHHHHH
Confidence 12233333 356799999999998752 23344555567888999999999999999999999999999999999999
Q ss_pred HHHHHHHhcC
Q 010101 493 ALGQFRLFTG 502 (518)
Q Consensus 493 a~~qf~lw~g 502 (518)
+..||++|||
T Consensus 146 ~~~~~~~~~~ 155 (155)
T cd01065 146 AAEAFELWTG 155 (155)
T ss_pred HHHHHHHhcC
Confidence 9999999997
No 24
>PF01488 Shikimate_DH: Shikimate / quinate 5-dehydrogenase; InterPro: IPR006151 This entry represents a domain found in shikimate and quinate dehydrogenases, as well as glutamyl-tRNA reductases. Shikimate 5-dehydrogenase (1.1.1.25 from EC) catalyses the conversion of shikimate to 5-dehydroshikimate [, ]. This reaction is part of the shikimate pathway which is involved in the biosynthesis of aromatic amino acids []. Quinate 5-dehydrogenase catalyses the conversion of quinate to 5-dehydroquinate. This reaction is part of the quinate pathway where quinic acid is exploited as a source of carbon in prokaryotes and microbial eukaryotes. Both the shikimate and quinate pathways share two common pathway metabolites, 3-dehydroquinate and dehydroshikimate. Glutamyl-tRNA reductase (1.2.1.70 from EC) catalyzes the first step of tetrapyrrole biosynthesis in plants, archaea and most bacteria. The dimeric enzyme has an unusual V-shaped architecture where each monomer consists of three domains linked by a long 'spinal' alpha-helix. The central catalytic domain specifically recognises the glutamate moiety of the substrate []. ; PDB: 2EV9_B 2CY0_B 1WXD_A 2D5C_A 1NVT_B 2EGG_A 3PWZ_A 3DOO_A 3DON_A 3FBT_C ....
Probab=99.64 E-value=4.3e-16 Score=139.71 Aligned_cols=97 Identities=40% Similarity=0.570 Sum_probs=78.7
Q ss_pred ccCCcEEEEEccchhHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHHhcCc---ccccccccccCCCCccEEEEcCCCCC
Q 010101 364 PIAGKIFVLVGAGGAGRALAFGAKSRGA-RVIIFNRNYERAKALADAVSGE---ALHFEYLHEFFPEKGMILANASAIGM 439 (518)
Q Consensus 364 ~l~~k~vlvlGaGg~araia~~L~~~G~-~v~i~nRt~~ka~~la~~~~~~---~~~~~~l~~~~~~~~divInatp~g~ 439 (518)
++++++++|+||||+||+++++|...|+ +|+|+|||.+|+++|++.++.. ..+++++.+ ...++|+||||||.||
T Consensus 9 ~l~~~~vlviGaGg~ar~v~~~L~~~g~~~i~i~nRt~~ra~~l~~~~~~~~~~~~~~~~~~~-~~~~~DivI~aT~~~~ 87 (135)
T PF01488_consen 9 DLKGKRVLVIGAGGAARAVAAALAALGAKEITIVNRTPERAEALAEEFGGVNIEAIPLEDLEE-ALQEADIVINATPSGM 87 (135)
T ss_dssp TGTTSEEEEESSSHHHHHHHHHHHHTTSSEEEEEESSHHHHHHHHHHHTGCSEEEEEGGGHCH-HHHTESEEEE-SSTTS
T ss_pred CcCCCEEEEECCHHHHHHHHHHHHHcCCCEEEEEECCHHHHHHHHHHcCccccceeeHHHHHH-HHhhCCeEEEecCCCC
Confidence 6789999999999999999999999999 7999999999999999999543 456776654 4567999999999998
Q ss_pred CCCCCCCCCChhhhcCC----CEEEEEeeCCCc
Q 010101 440 EPNSDQSPVPKEALKAY----ELVFDAVYTPRN 468 (518)
Q Consensus 440 ~~~~~~~~~~~~~l~~~----~~v~Di~Y~P~~ 468 (518)
. ++..+.+... .+++|+.+ |+.
T Consensus 88 ~------~i~~~~~~~~~~~~~~v~Dla~-Pr~ 113 (135)
T PF01488_consen 88 P------IITEEMLKKASKKLRLVIDLAV-PRD 113 (135)
T ss_dssp T------SSTHHHHTTTCHHCSEEEES-S-S-S
T ss_pred c------ccCHHHHHHHHhhhhceecccc-CCC
Confidence 6 3566666554 59999986 543
No 25
>cd05311 NAD_bind_2_malic_enz NAD(P) binding domain of malic enzyme (ME), subgroup 2. Malic enzyme (ME), a member of the amino acid dehydrogenase (DH)-like domain family, catalyzes the oxidative decarboxylation of L-malate to pyruvate in the presence of cations (typically Mg++ or Mn++) with the concomitant reduction of cofactor NAD+ or NADP+. ME has been found in all organisms, and plays important roles in diverse metabolic pathways such as photosynthesis and lipogenesis. This enzyme generally forms homotetramers. The conversion of malate to pyruvate by ME typically involves oxidation of malate to produce oxaloacetate, followed by decarboxylation of oxaloacetate to produce pyruvate and CO2. This subfamily consists primarily of archaeal and bacterial ME. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydroph
Probab=99.60 E-value=2e-15 Score=146.94 Aligned_cols=126 Identities=24% Similarity=0.242 Sum_probs=96.8
Q ss_pred cccCCcEEEEEccchhHHHHHHHHHHCCC---eEEEEeCC----HHHH-------HHHHHHhcCcccccccccccCCCCc
Q 010101 363 SPIAGKIFVLVGAGGAGRALAFGAKSRGA---RVIIFNRN----YERA-------KALADAVSGEALHFEYLHEFFPEKG 428 (518)
Q Consensus 363 ~~l~~k~vlvlGaGg~araia~~L~~~G~---~v~i~nRt----~~ka-------~~la~~~~~~~~~~~~l~~~~~~~~ 428 (518)
.++++++++|+|||++|+++++.|.+.|+ +|+|+||+ .+++ +++++.++...... ++.+ .+.++
T Consensus 21 ~~l~~~rvlvlGAGgAg~aiA~~L~~~G~~~~~i~ivdr~gl~~~~r~~~L~~~~~~la~~~~~~~~~~-~l~~-~l~~~ 98 (226)
T cd05311 21 KKIEEVKIVINGAGAAGIAIARLLLAAGAKPENIVVVDSKGVIYEGREDDLNPDKNEIAKETNPEKTGG-TLKE-ALKGA 98 (226)
T ss_pred CCccCCEEEEECchHHHHHHHHHHHHcCcCcceEEEEeCCCccccccchhhhHHHHHHHHHhccCcccC-CHHH-HHhcC
Confidence 46789999999999999999999999997 59999999 5654 55666654221111 2322 34568
Q ss_pred cEEEEcCCCCCCCCCCCCCCChhhhcCCCEEEEEeeCCCchHHHHHHHHCCCe-eeccHHHHHHHHHHH
Q 010101 429 MILANASAIGMEPNSDQSPVPKEALKAYELVFDAVYTPRNTRLLREAAEVGAT-VVSGVEMFIRQALGQ 496 (518)
Q Consensus 429 divInatp~g~~~~~~~~~~~~~~l~~~~~v~Di~Y~P~~T~ll~~A~~~G~~-~i~G~~ml~~Qa~~q 496 (518)
|+|||+||.||.+. .....+.+..++||++ +|..|+++++|++.|++ +.+|..|+++|+-..
T Consensus 99 dvlIgaT~~G~~~~-----~~l~~m~~~~ivf~ls-nP~~e~~~~~A~~~ga~i~a~G~~~~~~Q~nn~ 161 (226)
T cd05311 99 DVFIGVSRPGVVKK-----EMIKKMAKDPIVFALA-NPVPEIWPEEAKEAGADIVATGRSDFPNQVNNV 161 (226)
T ss_pred CEEEeCCCCCCCCH-----HHHHhhCCCCEEEEeC-CCCCcCCHHHHHHcCCcEEEeCCCCCcccccee
Confidence 99999999887541 1122344778999866 99999999999999996 999999999997543
No 26
>cd01078 NAD_bind_H4MPT_DH NADP binding domain of methylene tetrahydromethanopterin dehydrogenase. Methylene Tetrahydromethanopterin Dehydrogenase (H4MPT DH) NADP binding domain. NADP-dependent H4MPT DH catalyzes the dehydrogenation of methylene- H4MPT and methylene-tetrahydrofolate (H4F) with NADP+ as cofactor. H4F and H4MPT are both cofactors that carry the one-carbon units between the formyl and methyl oxidation level. H4F and H4MPT are structurally analogous to each other with respect to the pterin moiety, but each has distinct side chain. H4MPT is present only in anaerobic methanogenic archaea and aerobic methylotrophic proteobacteria. H4MPT seems to have evolved independently from H4F and functions as a distinct carrier in C1 metabolism. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclo
Probab=99.50 E-value=1.5e-13 Score=130.84 Aligned_cols=165 Identities=25% Similarity=0.252 Sum_probs=121.6
Q ss_pred EeecCHHHHHHHHHHHHHhhccCCCCCCCCcccCCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHhc
Q 010101 333 GYNTDCESAISAIEDALRERQGINGVASHTSPIAGKIFVLVGA-GGAGRALAFGAKSRGARVIIFNRNYERAKALADAVS 411 (518)
Q Consensus 333 G~NTD~~G~~~~l~~~l~~~~~~~~~~~~~~~l~~k~vlvlGa-Gg~araia~~L~~~G~~v~i~nRt~~ka~~la~~~~ 411 (518)
|-||-....+..+++.+... | .++++++++|+|+ |++|++++..|.+.|++|++++|+.++++++++.+.
T Consensus 3 G~~~ta~aav~~~~~~l~~~-~--------~~l~~~~vlVlGgtG~iG~~~a~~l~~~g~~V~l~~R~~~~~~~l~~~l~ 73 (194)
T cd01078 3 GSNTTAAAAVAAAGKALELM-G--------KDLKGKTAVVLGGTGPVGQRAAVLLAREGARVVLVGRDLERAQKAADSLR 73 (194)
T ss_pred CcHHHHHHHHHHHHHHHHHh-C--------cCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHH
Confidence 45666666677776656432 2 4678899999996 999999999999999999999999999999988764
Q ss_pred C----cc--c---ccccccccCCCCccEEEEcCCCCCCCCCCCCCCChhhhcCCCEEEEEeeCCCchHHHHHHHHC----
Q 010101 412 G----EA--L---HFEYLHEFFPEKGMILANASAIGMEPNSDQSPVPKEALKAYELVFDAVYTPRNTRLLREAAEV---- 478 (518)
Q Consensus 412 ~----~~--~---~~~~l~~~~~~~~divInatp~g~~~~~~~~~~~~~~l~~~~~v~Di~Y~P~~T~ll~~A~~~---- 478 (518)
. .. . +.+++.+ ...++|+||+|||.|+... ........+..+++|++|.|..++...+++..
T Consensus 74 ~~~~~~~~~~~~~~~~~~~~-~~~~~diVi~at~~g~~~~----~~~~~~~~~~~vv~D~~~~~~~~~~~~~~~~~~~~~ 148 (194)
T cd01078 74 ARFGEGVGAVETSDDAARAA-AIKGADVVFAAGAAGVELL----EKLAWAPKPLAVAADVNAVPPVGIEGIDVPDKGVDR 148 (194)
T ss_pred hhcCCcEEEeeCCCHHHHHH-HHhcCCEEEECCCCCceec----hhhhcccCceeEEEEccCCCCCCcccccccCCceec
Confidence 1 11 1 1122222 3467899999999998511 11112234467999999999999888887776
Q ss_pred ------CCeeeccHHHHHHHHHHHHHHhc--CCCCCHHHHHH
Q 010101 479 ------GATVVSGVEMFIRQALGQFRLFT--GGLAPEDFMRK 512 (518)
Q Consensus 479 ------G~~~i~G~~ml~~Qa~~qf~lw~--g~~~p~~~~~~ 512 (518)
|.....|+.|.++|+... |.|. ++..+.+.+.+
T Consensus 149 ~g~~~~g~~~~~g~~~~~~~~~~a-e~~~~~~~~~~~~~~~~ 189 (194)
T cd01078 149 EGKVPYGAIGVGGLKMKTHRACIA-KLFESNPLVLDAEEIYD 189 (194)
T ss_pred CCCeEEEeeccchhHHHHHHHHHH-HHhhcCCeeechHHHHH
Confidence 666779999999999877 8888 56666665554
No 27
>TIGR02853 spore_dpaA dipicolinic acid synthetase, A subunit. This predicted Rossman fold-containing protein is the A subunit of dipicolinic acid synthetase as found in most, though not all, endospore-forming low-GC Gram-positive bacteria; it is absent in Clostridium. The B subunit is represented by TIGR02852. This protein is also known as SpoVFA.
Probab=99.40 E-value=4.3e-13 Score=135.17 Aligned_cols=120 Identities=18% Similarity=0.197 Sum_probs=95.3
Q ss_pred cccCCcEEEEEccchhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHhcCcccccccccccCCCCccEEEEcCCCCCCCC
Q 010101 363 SPIAGKIFVLVGAGGAGRALAFGAKSRGARVIIFNRNYERAKALADAVSGEALHFEYLHEFFPEKGMILANASAIGMEPN 442 (518)
Q Consensus 363 ~~l~~k~vlvlGaGg~araia~~L~~~G~~v~i~nRt~~ka~~la~~~~~~~~~~~~l~~~~~~~~divInatp~g~~~~ 442 (518)
..+++++++|+|+|++|++++..|...|++|+++||+.++.+.+. ..+.....++++.+ ...++|+|||++|.++.+.
T Consensus 147 ~~l~gk~v~IiG~G~iG~avA~~L~~~G~~V~v~~R~~~~~~~~~-~~g~~~~~~~~l~~-~l~~aDiVint~P~~ii~~ 224 (287)
T TIGR02853 147 FTIHGSNVMVLGFGRTGMTIARTFSALGARVFVGARSSADLARIT-EMGLIPFPLNKLEE-KVAEIDIVINTIPALVLTA 224 (287)
T ss_pred CCCCCCEEEEEcChHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-HCCCeeecHHHHHH-HhccCCEEEECCChHHhCH
Confidence 468899999999999999999999999999999999988765543 34444445555554 4568999999999875321
Q ss_pred CCCCCCChhhhcCCCEEEEEeeCCCchHHHHHHHHCCCeee--ccHHHHH
Q 010101 443 SDQSPVPKEALKAYELVFDAVYTPRNTRLLREAAEVGATVV--SGVEMFI 490 (518)
Q Consensus 443 ~~~~~~~~~~l~~~~~v~Di~Y~P~~T~ll~~A~~~G~~~i--~G~~ml~ 490 (518)
. ..+.++++.+++|+.|+|..|+| +.|++.|++++ +|+.+.+
T Consensus 225 ---~--~l~~~k~~aliIDlas~Pg~tdf-~~Ak~~G~~a~~~~glPg~~ 268 (287)
T TIGR02853 225 ---D--VLSKLPKHAVIIDLASKPGGTDF-EYAKKRGIKALLAPGLPGIV 268 (287)
T ss_pred ---H--HHhcCCCCeEEEEeCcCCCCCCH-HHHHHCCCEEEEeCCCCccc
Confidence 1 11345778999999999999999 99999999987 8877554
No 28
>PRK08291 ectoine utilization protein EutC; Validated
Probab=99.32 E-value=1.2e-11 Score=127.42 Aligned_cols=151 Identities=18% Similarity=0.169 Sum_probs=105.5
Q ss_pred hhcCceeEEEEeccCCeEEEeecCHHHHHHHHHHHHHhhccCCCCCCCCcccCCcEEEEEccchhHHHHHHHHHH-CCC-
Q 010101 314 KSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALRERQGINGVASHTSPIAGKIFVLVGAGGAGRALAFGAKS-RGA- 391 (518)
Q Consensus 314 ~~iGavNTi~~~~~~g~l~G~NTD~~G~~~~l~~~l~~~~~~~~~~~~~~~l~~k~vlvlGaGg~araia~~L~~-~G~- 391 (518)
..+|++||++.+ ++.|.|+|||+.|++.+.. +. ....++++|+|+|++|++.+.++.. .++
T Consensus 96 ~~tG~~~ai~~d--~~~lt~~rT~a~~~~a~~~--la-------------~~~~~~v~IiGaG~~a~~~~~al~~~~~~~ 158 (330)
T PRK08291 96 ARTGLVEALLLD--NGYLTDVRTAAAGAVAARH--LA-------------REDASRAAVIGAGEQARLQLEALTLVRPIR 158 (330)
T ss_pred CCCCceEEEEcC--CchHHHHHHHHHHHHHHHH--hC-------------CCCCCEEEEECCCHHHHHHHHHHHhcCCCC
Confidence 467999999766 7889999999999999863 21 1235789999999999999999985 577
Q ss_pred eEEEEeCCHHHHHHHHHHhcC----cccccccccccCCCCccEEEEcCCCCCCCCCCCCCCChhhhcCCCEEEEE-eeCC
Q 010101 392 RVIIFNRNYERAKALADAVSG----EALHFEYLHEFFPEKGMILANASAIGMEPNSDQSPVPKEALKAYELVFDA-VYTP 466 (518)
Q Consensus 392 ~v~i~nRt~~ka~~la~~~~~----~~~~~~~l~~~~~~~~divInatp~g~~~~~~~~~~~~~~l~~~~~v~Di-~Y~P 466 (518)
+|+|+||+.++++++++++.. ....++++.+ ...++|+||+|||.. .| .+..++++++..+..+ .+.|
T Consensus 159 ~V~v~~R~~~~a~~l~~~~~~~~g~~v~~~~d~~~-al~~aDiVi~aT~s~-~p-----~i~~~~l~~g~~v~~vg~d~~ 231 (330)
T PRK08291 159 EVRVWARDAAKAEAYAADLRAELGIPVTVARDVHE-AVAGADIIVTTTPSE-EP-----ILKAEWLHPGLHVTAMGSDAE 231 (330)
T ss_pred EEEEEcCCHHHHHHHHHHHhhccCceEEEeCCHHH-HHccCCEEEEeeCCC-Cc-----EecHHHcCCCceEEeeCCCCC
Confidence 899999999999999987742 2222344444 456789999999864 22 2556678877767665 3344
Q ss_pred CchHHHHHHH-HCCCeeeccHHH
Q 010101 467 RNTRLLREAA-EVGATVVSGVEM 488 (518)
Q Consensus 467 ~~T~ll~~A~-~~G~~~i~G~~m 488 (518)
....+-...- ....-+++-++.
T Consensus 232 ~~rEld~~~l~~a~~v~vD~~~~ 254 (330)
T PRK08291 232 HKNEIAPAVFAAADLYVCDRLSQ 254 (330)
T ss_pred CcccCCHHHHhhCCEEEeCCHHH
Confidence 4332222222 222245666554
No 29
>TIGR02992 ectoine_eutC ectoine utilization protein EutC. Members of this protein family are EutA, a predicted arylmalonate decarboxylase found in a conserved ectoine utilization operon of species that include Sinorhizobium meliloti 1021 (where it is known to be induced by ectoine), Mesorhizobium loti, Silicibacter pomeroyi, Agrobacterium tumefaciens, and Pseudomonas putida. This family belongs to the ornithine cyclodeaminase/mu-crystallin family (pfam02423).
Probab=99.31 E-value=6.2e-12 Score=129.30 Aligned_cols=130 Identities=18% Similarity=0.177 Sum_probs=99.0
Q ss_pred hhcCceeEEEEeccCCeEEEeecCHHHHHHHHHHHHHhhccCCCCCCCCcccCCcEEEEEccchhHHHHHHHHH-HCCC-
Q 010101 314 KSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALRERQGINGVASHTSPIAGKIFVLVGAGGAGRALAFGAK-SRGA- 391 (518)
Q Consensus 314 ~~iGavNTi~~~~~~g~l~G~NTD~~G~~~~l~~~l~~~~~~~~~~~~~~~l~~k~vlvlGaGg~araia~~L~-~~G~- 391 (518)
...|++|+++.+ ++.+.|+|||+.|++.+.. +. ....++++|||+|++|++.+.+|. ..++
T Consensus 93 ~~tG~~~ai~~d--~~~lT~~RTaa~~~laa~~--la-------------~~~~~~v~iiGaG~qA~~~~~al~~~~~i~ 155 (326)
T TIGR02992 93 SRTGLLQALLLD--NGYLTDVRTAAAGAVAARH--LA-------------REDSSVVAIFGAGMQARLQLEALTLVRDIR 155 (326)
T ss_pred CCCCCceEEEcC--CchHHHHHHHHHHHHHHHH--hC-------------CCCCcEEEEECCCHHHHHHHHHHHHhCCcc
Confidence 356999999766 7889999999999998853 21 113578999999999999999997 4787
Q ss_pred eEEEEeCCHHHHHHHHHHhcC----cccccccccccCCCCccEEEEcCCCCCCCCCCCCCCChhhhcCCCEEEEEe-eCC
Q 010101 392 RVIIFNRNYERAKALADAVSG----EALHFEYLHEFFPEKGMILANASAIGMEPNSDQSPVPKEALKAYELVFDAV-YTP 466 (518)
Q Consensus 392 ~v~i~nRt~~ka~~la~~~~~----~~~~~~~l~~~~~~~~divInatp~g~~~~~~~~~~~~~~l~~~~~v~Di~-Y~P 466 (518)
+|+|+||+.++++++++++.. ....++++.+ ...++|+||+|||.. .| .+..++++++..+..+- |.|
T Consensus 156 ~v~V~~R~~~~a~~~a~~~~~~~g~~v~~~~~~~~-av~~aDiVvtaT~s~-~p-----~i~~~~l~~g~~i~~vg~~~p 228 (326)
T TIGR02992 156 SARIWARDSAKAEALALQLSSLLGIDVTAATDPRA-AMSGADIIVTTTPSE-TP-----ILHAEWLEPGQHVTAMGSDAE 228 (326)
T ss_pred EEEEECCCHHHHHHHHHHHHhhcCceEEEeCCHHH-HhccCCEEEEecCCC-Cc-----EecHHHcCCCcEEEeeCCCCC
Confidence 899999999999999988742 2223344444 456899999999863 22 25667888888777663 344
Q ss_pred C
Q 010101 467 R 467 (518)
Q Consensus 467 ~ 467 (518)
.
T Consensus 229 ~ 229 (326)
T TIGR02992 229 H 229 (326)
T ss_pred C
Confidence 4
No 30
>COG0373 HemA Glutamyl-tRNA reductase [Coenzyme metabolism]
Probab=99.26 E-value=1.7e-11 Score=127.45 Aligned_cols=144 Identities=23% Similarity=0.326 Sum_probs=106.5
Q ss_pred ccCCcEEEEEccchhHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHHhcCcccccccccccCCCCccEEEEcCCCCCCCC
Q 010101 364 PIAGKIFVLVGAGGAGRALAFGAKSRGA-RVIIFNRNYERAKALADAVSGEALHFEYLHEFFPEKGMILANASAIGMEPN 442 (518)
Q Consensus 364 ~l~~k~vlvlGaGg~araia~~L~~~G~-~v~i~nRt~~ka~~la~~~~~~~~~~~~l~~~~~~~~divInatp~g~~~~ 442 (518)
+++++++||||||.|+..++.+|...|+ +|+|+|||.+||++||++++..+.+++++.+ .+.++|+||.+|+.. .|.
T Consensus 175 ~L~~~~vlvIGAGem~~lva~~L~~~g~~~i~IaNRT~erA~~La~~~~~~~~~l~el~~-~l~~~DvVissTsa~-~~i 252 (414)
T COG0373 175 SLKDKKVLVIGAGEMGELVAKHLAEKGVKKITIANRTLERAEELAKKLGAEAVALEELLE-ALAEADVVISSTSAP-HPI 252 (414)
T ss_pred ccccCeEEEEcccHHHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHhCCeeecHHHHHH-hhhhCCEEEEecCCC-ccc
Confidence 4789999999999999999999999998 9999999999999999999988889999877 778899999999864 233
Q ss_pred CCCCCCChhhhc-CCCEEEEEeeCCCch-------------------HHHHHHHHCCCeeeccHHHHHHHHHHHHHHhcC
Q 010101 443 SDQSPVPKEALK-AYELVFDAVYTPRNT-------------------RLLREAAEVGATVVSGVEMFIRQALGQFRLFTG 502 (518)
Q Consensus 443 ~~~~~~~~~~l~-~~~~v~Di~Y~P~~T-------------------~ll~~A~~~G~~~i~G~~ml~~Qa~~qf~lw~g 502 (518)
.....+....-. ...+++|+.- |+.. ...++-.+..-..+.-.+.++++.+..|..|..
T Consensus 253 i~~~~ve~a~~~r~~~livDiav-PRdie~~v~~l~~v~l~~iDDL~~iv~~n~~~R~~~~~~ae~iIeee~~~~~~~l~ 331 (414)
T COG0373 253 ITREMVERALKIRKRLLIVDIAV-PRDVEPEVGELPNVFLYTIDDLEEIVEENLEARKEEAAKAEAIIEEELAEFMEWLK 331 (414)
T ss_pred cCHHHHHHHHhcccCeEEEEecC-CCCCCccccCcCCeEEEehhhHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 222222221111 2258888864 4321 122223334455677888999999999999986
Q ss_pred CCCCHHHH
Q 010101 503 GLAPEDFM 510 (518)
Q Consensus 503 ~~~p~~~~ 510 (518)
..--.+.+
T Consensus 332 ~~~~~~~i 339 (414)
T COG0373 332 KLEVVPTI 339 (414)
T ss_pred HhhchHHH
Confidence 54433333
No 31
>PRK13940 glutamyl-tRNA reductase; Provisional
Probab=99.26 E-value=2.7e-11 Score=127.85 Aligned_cols=133 Identities=17% Similarity=0.224 Sum_probs=97.0
Q ss_pred ccCCcEEEEEccchhHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHHhc-CcccccccccccCCCCccEEEEcCCCCCCC
Q 010101 364 PIAGKIFVLVGAGGAGRALAFGAKSRGA-RVIIFNRNYERAKALADAVS-GEALHFEYLHEFFPEKGMILANASAIGMEP 441 (518)
Q Consensus 364 ~l~~k~vlvlGaGg~araia~~L~~~G~-~v~i~nRt~~ka~~la~~~~-~~~~~~~~l~~~~~~~~divInatp~g~~~ 441 (518)
++.+++++|+|+||||++++.+|...|+ +|+|+|||.+++++|++.++ ....+++++.+ .+.++|+|||||+.+. |
T Consensus 178 ~l~~kkvlviGaG~~a~~va~~L~~~g~~~I~V~nRt~~ra~~La~~~~~~~~~~~~~l~~-~l~~aDiVI~aT~a~~-~ 255 (414)
T PRK13940 178 NISSKNVLIIGAGQTGELLFRHVTALAPKQIMLANRTIEKAQKITSAFRNASAHYLSELPQ-LIKKADIIIAAVNVLE-Y 255 (414)
T ss_pred CccCCEEEEEcCcHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHhcCCeEecHHHHHH-HhccCCEEEECcCCCC-e
Confidence 4778999999999999999999999998 99999999999999999997 55567777655 5678999999998753 2
Q ss_pred CCCCCCCChhhhc-CCCEEEEEeeCCCc-------------------hHHHHHHHHCCCeeeccHHHHHHHHHHHHHHhc
Q 010101 442 NSDQSPVPKEALK-AYELVFDAVYTPRN-------------------TRLLREAAEVGATVVSGVEMFIRQALGQFRLFT 501 (518)
Q Consensus 442 ~~~~~~~~~~~l~-~~~~v~Di~Y~P~~-------------------T~ll~~A~~~G~~~i~G~~ml~~Qa~~qf~lw~ 501 (518)
. +..+.+. ...+++|+.- |+. ....+...+.....+.-.+.++.+.+..|.-|.
T Consensus 256 v-----i~~~~~~~~~~~~iDLav-PRdidp~v~~l~~v~l~~iDdl~~i~~~n~~~R~~~~~~a~~iI~e~~~~f~~w~ 329 (414)
T PRK13940 256 I-----VTCKYVGDKPRVFIDISI-PQALDPKLGELEQNVYYCVDDINAVIEDNKDKRKYESSKAQKIIVKSLEEYLEKE 329 (414)
T ss_pred e-----ECHHHhCCCCeEEEEeCC-CCCCCccccCcCCeEEEeHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 2 2222221 2245666642 321 112222333344456678889999999999999
Q ss_pred CCC
Q 010101 502 GGL 504 (518)
Q Consensus 502 g~~ 504 (518)
...
T Consensus 330 ~~~ 332 (414)
T PRK13940 330 KAI 332 (414)
T ss_pred Hhc
Confidence 654
No 32
>PRK08306 dipicolinate synthase subunit A; Reviewed
Probab=99.24 E-value=1.2e-11 Score=125.36 Aligned_cols=120 Identities=22% Similarity=0.210 Sum_probs=94.7
Q ss_pred cccCCcEEEEEccchhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHhcCcccccccccccCCCCccEEEEcCCCCCCCC
Q 010101 363 SPIAGKIFVLVGAGGAGRALAFGAKSRGARVIIFNRNYERAKALADAVSGEALHFEYLHEFFPEKGMILANASAIGMEPN 442 (518)
Q Consensus 363 ~~l~~k~vlvlGaGg~araia~~L~~~G~~v~i~nRt~~ka~~la~~~~~~~~~~~~l~~~~~~~~divInatp~g~~~~ 442 (518)
..+.+++++|+|+|++|++++..|..+|++|++++|+.++. +.++.++.....++++.+ ...++|+||||+|..+..
T Consensus 148 ~~l~g~kvlViG~G~iG~~~a~~L~~~Ga~V~v~~r~~~~~-~~~~~~G~~~~~~~~l~~-~l~~aDiVI~t~p~~~i~- 224 (296)
T PRK08306 148 ITIHGSNVLVLGFGRTGMTLARTLKALGANVTVGARKSAHL-ARITEMGLSPFHLSELAE-EVGKIDIIFNTIPALVLT- 224 (296)
T ss_pred CCCCCCEEEEECCcHHHHHHHHHHHHCCCEEEEEECCHHHH-HHHHHcCCeeecHHHHHH-HhCCCCEEEECCChhhhh-
Confidence 35678999999999999999999999999999999998764 445566665555555554 456799999999865321
Q ss_pred CCCCCCChhhhcCCCEEEEEeeCCCchHHHHHHHHCCCeee--ccHHHHH
Q 010101 443 SDQSPVPKEALKAYELVFDAVYTPRNTRLLREAAEVGATVV--SGVEMFI 490 (518)
Q Consensus 443 ~~~~~~~~~~l~~~~~v~Di~Y~P~~T~ll~~A~~~G~~~i--~G~~ml~ 490 (518)
... .+.++++.+++|+.|.|..|.| +.|++.|++++ +|+.+.+
T Consensus 225 --~~~--l~~~~~g~vIIDla~~pggtd~-~~a~~~Gv~~~~~~~lpg~v 269 (296)
T PRK08306 225 --KEV--LSKMPPEALIIDLASKPGGTDF-EYAEKRGIKALLAPGLPGKV 269 (296)
T ss_pred --HHH--HHcCCCCcEEEEEccCCCCcCe-eehhhCCeEEEEECCCCccC
Confidence 100 1235788999999999999999 89999999988 8888665
No 33
>PRK00045 hemA glutamyl-tRNA reductase; Reviewed
Probab=99.18 E-value=2.3e-11 Score=129.44 Aligned_cols=189 Identities=23% Similarity=0.344 Sum_probs=132.3
Q ss_pred chHHHHhcccccChhhhhcCceeEEEEe---c--cCCeEEEeecCHHHHHHH-----HHHHHHhhccCCCCCCCCcccCC
Q 010101 298 HKEPAVACCDEVHPLAKSIGAVNTIIRR---P--IDGKLVGYNTDCESAISA-----IEDALRERQGINGVASHTSPIAG 367 (518)
Q Consensus 298 ~K~~v~~~~d~~~~~A~~iGavNTi~~~---~--~~g~l~G~NTD~~G~~~~-----l~~~l~~~~~~~~~~~~~~~l~~ 367 (518)
=+..|+..++.....|+..|++|+++.. . .-++..+++|+..+.-.+ ++.. .... .++.+
T Consensus 113 GE~qIlgQvk~a~~~a~~~g~~g~~l~~lf~~a~~~~k~v~~~t~i~~~~~Sv~~~Av~~a-~~~~---------~~~~~ 182 (423)
T PRK00045 113 GEPQILGQVKDAYALAQEAGTVGTILNRLFQKAFSVAKRVRTETGIGAGAVSVASAAVELA-KQIF---------GDLSG 182 (423)
T ss_pred CChHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHHHhhHhhhcCCCCCCcCHHHHHHHHH-HHhh---------CCccC
Confidence 4677899999999999999999998731 0 135677888885542222 2211 1000 13678
Q ss_pred cEEEEEccchhHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHHhcCcccccccccccCCCCccEEEEcCCCCCCCCCCCC
Q 010101 368 KIFVLVGAGGAGRALAFGAKSRGA-RVIIFNRNYERAKALADAVSGEALHFEYLHEFFPEKGMILANASAIGMEPNSDQS 446 (518)
Q Consensus 368 k~vlvlGaGg~araia~~L~~~G~-~v~i~nRt~~ka~~la~~~~~~~~~~~~l~~~~~~~~divInatp~g~~~~~~~~ 446 (518)
++++|+|+|++|+.++..|...|+ +|+++||+.++++++++.++.....++++.+ ...++|+||+||+... |.
T Consensus 183 ~~vlViGaG~iG~~~a~~L~~~G~~~V~v~~r~~~ra~~la~~~g~~~~~~~~~~~-~l~~aDvVI~aT~s~~-~~---- 256 (423)
T PRK00045 183 KKVLVIGAGEMGELVAKHLAEKGVRKITVANRTLERAEELAEEFGGEAIPLDELPE-ALAEADIVISSTGAPH-PI---- 256 (423)
T ss_pred CEEEEECchHHHHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHcCCcEeeHHHHHH-HhccCCEEEECCCCCC-cE----
Confidence 999999999999999999999998 9999999999999999998765555555544 4567999999997542 21
Q ss_pred CCChhhhc--------CCCEEEEEeeCCCc---------------h----HHHHHHHHCCCeeeccHHHHHHHHHHHHHH
Q 010101 447 PVPKEALK--------AYELVFDAVYTPRN---------------T----RLLREAAEVGATVVSGVEMFIRQALGQFRL 499 (518)
Q Consensus 447 ~~~~~~l~--------~~~~v~Di~Y~P~~---------------T----~ll~~A~~~G~~~i~G~~ml~~Qa~~qf~l 499 (518)
+..++++ ...+++|+. .|+. . ...++..+.....+.-.+-++.+.+..|.-
T Consensus 257 -i~~~~l~~~~~~~~~~~~vviDla-~Prdid~~v~~l~~v~l~~vDdl~~~~~~n~~~r~~~~~~a~~ii~~~~~~f~~ 334 (423)
T PRK00045 257 -IGKGMVERALKARRHRPLLLVDLA-VPRDIEPEVGELPGVYLYDVDDLQEIVEENLAQRQEAAEKAEAIVEEEVAEFME 334 (423)
T ss_pred -EcHHHHHHHHhhccCCCeEEEEeC-CCCCCcccccccCCeEEEEHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3333331 346888987 4432 1 111222223344567778889999999999
Q ss_pred hcCCC
Q 010101 500 FTGGL 504 (518)
Q Consensus 500 w~g~~ 504 (518)
|....
T Consensus 335 ~~~~~ 339 (423)
T PRK00045 335 WLRSL 339 (423)
T ss_pred HHHhc
Confidence 98654
No 34
>PLN00203 glutamyl-tRNA reductase
Probab=98.80 E-value=2.2e-08 Score=108.47 Aligned_cols=133 Identities=20% Similarity=0.305 Sum_probs=94.7
Q ss_pred ccCCcEEEEEccchhHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHHhcCc---ccccccccccCCCCccEEEEcCCCCC
Q 010101 364 PIAGKIFVLVGAGGAGRALAFGAKSRGA-RVIIFNRNYERAKALADAVSGE---ALHFEYLHEFFPEKGMILANASAIGM 439 (518)
Q Consensus 364 ~l~~k~vlvlGaGg~araia~~L~~~G~-~v~i~nRt~~ka~~la~~~~~~---~~~~~~l~~~~~~~~divInatp~g~ 439 (518)
++.+++++|||+|++|++++.+|...|+ +|+|+||+.++++++++.++.. ...++++.+ ...++|+||+||+.+.
T Consensus 263 ~l~~kkVlVIGAG~mG~~~a~~L~~~G~~~V~V~nRs~era~~La~~~~g~~i~~~~~~dl~~-al~~aDVVIsAT~s~~ 341 (519)
T PLN00203 263 SHASARVLVIGAGKMGKLLVKHLVSKGCTKMVVVNRSEERVAALREEFPDVEIIYKPLDEMLA-CAAEADVVFTSTSSET 341 (519)
T ss_pred CCCCCEEEEEeCHHHHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHhCCCceEeecHhhHHH-HHhcCCEEEEccCCCC
Confidence 3778999999999999999999999998 8999999999999999988522 224445444 4577999999998653
Q ss_pred CCCCCCCCCChhhhc----------CCCEEEEEeeCCCc-------------------hHHHHHHHHCCCeeeccHHHHH
Q 010101 440 EPNSDQSPVPKEALK----------AYELVFDAVYTPRN-------------------TRLLREAAEVGATVVSGVEMFI 490 (518)
Q Consensus 440 ~~~~~~~~~~~~~l~----------~~~~v~Di~Y~P~~-------------------T~ll~~A~~~G~~~i~G~~ml~ 490 (518)
|. +..+.+. ...+++|+.- |+. .......++.....+.-.+.++
T Consensus 342 -pv-----I~~e~l~~~~~~~~~~~~~~~~IDLAv-PRdIdp~v~~l~~v~lydiDdL~~i~~~n~~~R~~~~~~Ae~II 414 (519)
T PLN00203 342 -PL-----FLKEHVEALPPASDTVGGKRLFVDISV-PRNVGACVSELESARVYNVDDLKEVVAANKEDRLRKAMEAQTII 414 (519)
T ss_pred -Ce-----eCHHHHHHhhhcccccCCCeEEEEeCC-CCCCccccccCCCCeEEEeccHHHHHHHhHHHHHHHHHHHHHHH
Confidence 32 2222221 1246777753 321 1222333344445667788899
Q ss_pred HHHHHHHHHhcCCC
Q 010101 491 RQALGQFRLFTGGL 504 (518)
Q Consensus 491 ~Qa~~qf~lw~g~~ 504 (518)
.+.+..|.-|....
T Consensus 415 ~ee~~~F~~w~~~~ 428 (519)
T PLN00203 415 REESKNFEAWRDSL 428 (519)
T ss_pred HHHHHHHHHHHHhc
Confidence 99999999998654
No 35
>TIGR01035 hemA glutamyl-tRNA reductase. This enzyme, together with glutamate-1-semialdehyde-2,1-aminomutase (TIGR00713), leads to the production of delta-amino-levulinic acid from Glu-tRNA.
Probab=98.77 E-value=2.9e-08 Score=105.56 Aligned_cols=134 Identities=28% Similarity=0.452 Sum_probs=96.5
Q ss_pred ccCCcEEEEEccchhHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHHhcCcccccccccccCCCCccEEEEcCCCCCCCC
Q 010101 364 PIAGKIFVLVGAGGAGRALAFGAKSRGA-RVIIFNRNYERAKALADAVSGEALHFEYLHEFFPEKGMILANASAIGMEPN 442 (518)
Q Consensus 364 ~l~~k~vlvlGaGg~araia~~L~~~G~-~v~i~nRt~~ka~~la~~~~~~~~~~~~l~~~~~~~~divInatp~g~~~~ 442 (518)
.+.+++++|+|+|.+|+.++..|...|+ +|+++||+.++++++++.++...+.++++.+ ...++|+||+||+... |.
T Consensus 177 ~l~~~~VlViGaG~iG~~~a~~L~~~G~~~V~v~~rs~~ra~~la~~~g~~~i~~~~l~~-~l~~aDvVi~aT~s~~-~i 254 (417)
T TIGR01035 177 SLKGKKALLIGAGEMGELVAKHLLRKGVGKILIANRTYERAEDLAKELGGEAVKFEDLEE-YLAEADIVISSTGAPH-PI 254 (417)
T ss_pred CccCCEEEEECChHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHcCCeEeeHHHHHH-HHhhCCEEEECCCCCC-ce
Confidence 3678999999999999999999999996 9999999999999999998765555555554 4567999999997542 21
Q ss_pred CCCCCCChhhhc-------CCCEEEEEeeCCCch---------------HHHHHHH----HCCCeeeccHHHHHHHHHHH
Q 010101 443 SDQSPVPKEALK-------AYELVFDAVYTPRNT---------------RLLREAA----EVGATVVSGVEMFIRQALGQ 496 (518)
Q Consensus 443 ~~~~~~~~~~l~-------~~~~v~Di~Y~P~~T---------------~ll~~A~----~~G~~~i~G~~ml~~Qa~~q 496 (518)
+..+.+. ...+++|+. .|+.- .-+++.- +.....+.-.+-++.+.+..
T Consensus 255 -----i~~e~l~~~~~~~~~~~~viDla-~Prdid~~v~~l~~v~l~~vDdl~~~~~~n~~~r~~~~~~a~~ii~~~~~~ 328 (417)
T TIGR01035 255 -----VSKEDVERALRERTRPLFIIDIA-VPRDVDPAVARLEGVFLYDVDDLQPVVEENLAERREEAEKAEEIVEEETAE 328 (417)
T ss_pred -----EcHHHHHHHHhcCCCCeEEEEeC-CCCCCChhhcCcCCeEEEEHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHH
Confidence 3333332 234889997 55421 1122222 22333466777889999999
Q ss_pred HHHhcCCCC
Q 010101 497 FRLFTGGLA 505 (518)
Q Consensus 497 f~lw~g~~~ 505 (518)
|.-|.....
T Consensus 329 f~~w~~~~~ 337 (417)
T TIGR01035 329 FKQWLRSLE 337 (417)
T ss_pred HHHHHHhcc
Confidence 999987543
No 36
>PRK06141 ornithine cyclodeaminase; Validated
Probab=98.61 E-value=1.6e-07 Score=96.29 Aligned_cols=114 Identities=25% Similarity=0.246 Sum_probs=81.1
Q ss_pred CCcEEEEEccchhHHHHHHHHHH-CCC-eEEEEeCCHHHHHHHHHHhcCc---ccccccccccCCCCccEEEEcCCCCCC
Q 010101 366 AGKIFVLVGAGGAGRALAFGAKS-RGA-RVIIFNRNYERAKALADAVSGE---ALHFEYLHEFFPEKGMILANASAIGME 440 (518)
Q Consensus 366 ~~k~vlvlGaGg~araia~~L~~-~G~-~v~i~nRt~~ka~~la~~~~~~---~~~~~~l~~~~~~~~divInatp~g~~ 440 (518)
..++++|||+|++|++++.++.. .+. +|+|+||++++++++++++... ....++..+ ...++|+||++|+.. .
T Consensus 124 ~~~~v~iiG~G~~a~~~~~al~~~~~~~~V~V~~Rs~~~a~~~a~~~~~~g~~~~~~~~~~~-av~~aDIVi~aT~s~-~ 201 (314)
T PRK06141 124 DASRLLVVGTGRLASLLALAHASVRPIKQVRVWGRDPAKAEALAAELRAQGFDAEVVTDLEA-AVRQADIISCATLST-E 201 (314)
T ss_pred CCceEEEECCcHHHHHHHHHHHhcCCCCEEEEEcCCHHHHHHHHHHHHhcCCceEEeCCHHH-HHhcCCEEEEeeCCC-C
Confidence 46899999999999999987775 566 8999999999999999987432 222233333 456799999999854 2
Q ss_pred CCCCCCCCChhhhcCCCEEEEEeeC--CCchHHHHHHHHCCCeeeccHH
Q 010101 441 PNSDQSPVPKEALKAYELVFDAVYT--PRNTRLLREAAEVGATVVSGVE 487 (518)
Q Consensus 441 ~~~~~~~~~~~~l~~~~~v~Di~Y~--P~~T~ll~~A~~~G~~~i~G~~ 487 (518)
| .+..++++++. ++|+++. |....+-.+..+++..+++=.+
T Consensus 202 p-----vl~~~~l~~g~-~i~~ig~~~~~~~El~~~~~~~a~~~vD~~~ 244 (314)
T PRK06141 202 P-----LVRGEWLKPGT-HLDLVGNFTPDMRECDDEAIRRASVYVDTRA 244 (314)
T ss_pred C-----EecHHHcCCCC-EEEeeCCCCcccccCCHHHHhcCcEEEcCHH
Confidence 2 25567888876 8898876 3223333344555666777654
No 37
>COG1748 LYS9 Saccharopine dehydrogenase and related proteins [Amino acid transport and metabolism]
Probab=98.59 E-value=1.2e-07 Score=98.58 Aligned_cols=125 Identities=25% Similarity=0.304 Sum_probs=92.2
Q ss_pred cEEEEEccchhHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHHhcC--ccc--ccc---cccccCCCCccEEEEcCCCCC
Q 010101 368 KIFVLVGAGGAGRALAFGAKSRGA-RVIIFNRNYERAKALADAVSG--EAL--HFE---YLHEFFPEKGMILANASAIGM 439 (518)
Q Consensus 368 k~vlvlGaGg~araia~~L~~~G~-~v~i~nRt~~ka~~la~~~~~--~~~--~~~---~l~~~~~~~~divInatp~g~ 439 (518)
++++|||+|+.|+++|.-|++.|- +|+|++||.+++.+++...+. +.. +.. .+.+ .+.+.|+|||+.|.-.
T Consensus 2 ~~ilviGaG~Vg~~va~~la~~~d~~V~iAdRs~~~~~~i~~~~~~~v~~~~vD~~d~~al~~-li~~~d~VIn~~p~~~ 80 (389)
T COG1748 2 MKILVIGAGGVGSVVAHKLAQNGDGEVTIADRSKEKCARIAELIGGKVEALQVDAADVDALVA-LIKDFDLVINAAPPFV 80 (389)
T ss_pred CcEEEECCchhHHHHHHHHHhCCCceEEEEeCCHHHHHHHHhhccccceeEEecccChHHHHH-HHhcCCEEEEeCCchh
Confidence 579999999999999999999995 999999999999999877532 222 222 2223 3567799999997532
Q ss_pred CCCCCCCCCChhhhcCCCEEEEEeeCCCc-hHHHHHHHHCCCeeeccHH-------HHHHHHHHHHH
Q 010101 440 EPNSDQSPVPKEALKAYELVFDAVYTPRN-TRLLREAAEVGATVVSGVE-------MFIRQALGQFR 498 (518)
Q Consensus 440 ~~~~~~~~~~~~~l~~~~~v~Di~Y~P~~-T~ll~~A~~~G~~~i~G~~-------ml~~Qa~~qf~ 498 (518)
.. .+-..+++.+.-++|++|.+.. -.+-.+|+++|..++.|.+ .+..+++.+|.
T Consensus 81 ~~-----~i~ka~i~~gv~yvDts~~~~~~~~~~~~a~~Agit~v~~~G~dPGi~nv~a~~a~~~~~ 142 (389)
T COG1748 81 DL-----TILKACIKTGVDYVDTSYYEEPPWKLDEEAKKAGITAVLGCGFDPGITNVLAAYAAKELF 142 (389)
T ss_pred hH-----HHHHHHHHhCCCEEEcccCCchhhhhhHHHHHcCeEEEcccCcCcchHHHHHHHHHHHhh
Confidence 11 1334567777889999998654 4456688899988776543 67778877766
No 38
>PRK14175 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=98.59 E-value=2.7e-06 Score=85.18 Aligned_cols=199 Identities=19% Similarity=0.271 Sum_probs=123.7
Q ss_pred HHHHHHcCCCceEEeccc----CcHHHHHHHh-cCCCCCEEEecccchHHH--HhcccccChhhhhcCceeEEEEeccCC
Q 010101 257 NPAFRHTRFNGIYVPMLV----DDVKEFFRTY-SGTDFAGFSVGIPHKEPA--VACCDEVHPLAKSIGAVNTIIRRPIDG 329 (518)
Q Consensus 257 n~~f~~~gl~~~y~~~~~----~~l~~~~~~l-~~~~~~G~~VT~P~K~~v--~~~~d~~~~~A~~iGavNTi~~~~~~g 329 (518)
-+..+++|++.....++- +++...++.+ .++++.|+.|-.|+-..+ ...++.++|. |-+-..+..- -|
T Consensus 54 ~k~a~~~Gi~~~~~~l~~~~~~~~l~~~I~~lN~d~~V~GIivq~Plp~~i~~~~i~~~I~p~-KDVDGl~~~n----~g 128 (286)
T PRK14175 54 KKAAEKIGMISEIVHLEETATEEEVLNELNRLNNDDSVSGILVQVPLPKQVSEQKILEAINPE-KDVDGFHPIN----IG 128 (286)
T ss_pred HHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCCCCCCEEEEeCCCCCCCCHHHHHhccCcc-cCcccCCccc----hH
Confidence 367889999987776664 2566666666 577899999999964322 1122222211 1111111110 01
Q ss_pred eEE-Ee----ecCHHHHHHHHHHHHHhhccCCCCCCCCcccCCcEEEEEccch-hHHHHHHHHHHCCCeEEEEeCCHHHH
Q 010101 330 KLV-GY----NTDCESAISAIEDALRERQGINGVASHTSPIAGKIFVLVGAGG-AGRALAFGAKSRGARVIIFNRNYERA 403 (518)
Q Consensus 330 ~l~-G~----NTD~~G~~~~l~~~l~~~~~~~~~~~~~~~l~~k~vlvlGaGg-~araia~~L~~~G~~v~i~nRt~~ka 403 (518)
++. |. ----.|++..|+. .+ .+++||+++|+|.|+ +|+.++..|...|+.|+++++....
T Consensus 129 ~l~~~~~~~~PcTp~ai~~ll~~-----~~--------i~l~Gk~vvVIGrs~~VG~pla~lL~~~gatVtv~~s~t~~- 194 (286)
T PRK14175 129 KLYIDEQTFVPCTPLGIMEILKH-----AD--------IDLEGKNAVVIGRSHIVGQPVSKLLLQKNASVTILHSRSKD- 194 (286)
T ss_pred hHhcCCCCCCCCcHHHHHHHHHH-----cC--------CCCCCCEEEEECCCchhHHHHHHHHHHCCCeEEEEeCCchh-
Confidence 111 11 1124556665543 12 578999999999999 9999999999999999999985321
Q ss_pred HHHHHHhcCcccccccccccCCCCccEEEEcCCCCCCCCCCCCCCChhhhcCCCEEEEEeeCCC-------chHHHHHHH
Q 010101 404 KALADAVSGEALHFEYLHEFFPEKGMILANASAIGMEPNSDQSPVPKEALKAYELVFDAVYTPR-------NTRLLREAA 476 (518)
Q Consensus 404 ~~la~~~~~~~~~~~~l~~~~~~~~divInatp~g~~~~~~~~~~~~~~l~~~~~v~Di~Y~P~-------~T~ll~~A~ 476 (518)
|. + ...++|+||+|++. |. .+..++++++.+|+|+-.+|. ...| +.++
T Consensus 195 --l~--------------~-~~~~ADIVIsAvg~---p~----~i~~~~vk~gavVIDvGi~~~~~gkl~GDvd~-~~~~ 249 (286)
T PRK14175 195 --MA--------------S-YLKDADVIVSAVGK---PG----LVTKDVVKEGAVIIDVGNTPDENGKLKGDVDY-DAVK 249 (286)
T ss_pred --HH--------------H-HHhhCCEEEECCCC---Cc----ccCHHHcCCCcEEEEcCCCcCCCCCeecCccH-HHHH
Confidence 11 1 34568999999974 22 366788999999999998872 2333 3343
Q ss_pred HC-C-Ce-eeccH-----HHHHHHHHHHHHH
Q 010101 477 EV-G-AT-VVSGV-----EMFIRQALGQFRL 499 (518)
Q Consensus 477 ~~-G-~~-~i~G~-----~ml~~Qa~~qf~l 499 (518)
++ + +. +=.|. -||+.+.+.+.+.
T Consensus 250 ~~a~~iTPVPGGVGp~T~a~L~~n~~~a~~~ 280 (286)
T PRK14175 250 EIAGAITPVPGGVGPLTITMVLNNTLLAEKM 280 (286)
T ss_pred hhccCcCCCCCCCHHHHHHHHHHHHHHHHHH
Confidence 33 2 22 22343 4888877766543
No 39
>cd05213 NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain of glutamyl-tRNA reductase. Glutamyl-tRNA reductase catalyzes the conversion of glutamyl-tRNA to glutamate-1-semialdehyde, initiating the synthesis of tetrapyrrole. Whereas tRNAs are generally associated with peptide bond formation in protein translation, here the tRNA activates glutamate in the initiation of tetrapyrrole biosynthesis in archaea, plants and many bacteria. In the first step, activated glutamate is reduced to glutamate-1-semi-aldehyde via the NADPH dependent glutamyl-tRNA reductase. Glutamyl-tRNA reductase forms a V-shaped dimer. Each monomer has 3 domains: an N-terminal catalytic domain, a classic nucleotide binding domain, and a C-terminal dimerization domain. Although the representative structure 1GPJ lacks a bound NADPH, a theoretical binding pocket has been described. (PMID 11172694). Amino acid dehydrogenase (DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate,
Probab=98.54 E-value=9.5e-08 Score=97.77 Aligned_cols=97 Identities=28% Similarity=0.467 Sum_probs=74.2
Q ss_pred cCCcEEEEEccchhHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHHhcCcccccccccccCCCCccEEEEcCCCCCCCCC
Q 010101 365 IAGKIFVLVGAGGAGRALAFGAKSRGA-RVIIFNRNYERAKALADAVSGEALHFEYLHEFFPEKGMILANASAIGMEPNS 443 (518)
Q Consensus 365 l~~k~vlvlGaGg~araia~~L~~~G~-~v~i~nRt~~ka~~la~~~~~~~~~~~~l~~~~~~~~divInatp~g~~~~~ 443 (518)
+.+++++|+|+|.+|+.++..|...|+ +|+++||+.++++++++.++.....++++.+ ...++|+||.||+......
T Consensus 176 l~~~~V~ViGaG~iG~~~a~~L~~~g~~~V~v~~r~~~ra~~la~~~g~~~~~~~~~~~-~l~~aDvVi~at~~~~~~~- 253 (311)
T cd05213 176 LKGKKVLVIGAGEMGELAAKHLAAKGVAEITIANRTYERAEELAKELGGNAVPLDELLE-LLNEADVVISATGAPHYAK- 253 (311)
T ss_pred ccCCEEEEECcHHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHcCCeEEeHHHHHH-HHhcCCEEEECCCCCchHH-
Confidence 678999999999999999999998887 9999999999999999999876555555544 4567899999998643200
Q ss_pred CCCCCChhhh----cCCCEEEEEeeCCCc
Q 010101 444 DQSPVPKEAL----KAYELVFDAVYTPRN 468 (518)
Q Consensus 444 ~~~~~~~~~l----~~~~~v~Di~Y~P~~ 468 (518)
+....+ .++.+++|+. .|+.
T Consensus 254 ----~~~~~~~~~~~~~~~viDla-vPrd 277 (311)
T cd05213 254 ----IVERAMKKRSGKPRLIVDLA-VPRD 277 (311)
T ss_pred ----HHHHHHhhCCCCCeEEEEeC-CCCC
Confidence 111111 2457899998 5654
No 40
>cd01075 NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase. Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NADP+. For example, leucine DH catalyzes the reversible oxidative deamination of L-leucine and several other straight or branched chain amino acids to the corresponding 2-oxoacid derivative. Amino acid DH -like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily inc
Probab=98.52 E-value=2.1e-06 Score=82.28 Aligned_cols=148 Identities=17% Similarity=0.170 Sum_probs=100.9
Q ss_pred HHHHHHHHHHHHHhhccCCCCCCCCcccCCcEEEEEccchhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHhcCccccc
Q 010101 338 CESAISAIEDALRERQGINGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGARVIIFNRNYERAKALADAVSGEALHF 417 (518)
Q Consensus 338 ~~G~~~~l~~~l~~~~~~~~~~~~~~~l~~k~vlvlGaGg~araia~~L~~~G~~v~i~nRt~~ka~~la~~~~~~~~~~ 417 (518)
+.|...+++..+....+ ..+++|++++|+|.|.+|+.++..|.+.|++|++++++.++.+++++.++...++.
T Consensus 6 g~Gv~~~~~~~~~~~~~-------~~~l~gk~v~I~G~G~vG~~~A~~L~~~G~~Vvv~D~~~~~~~~~~~~~g~~~v~~ 78 (200)
T cd01075 6 AYGVFLGMKAAAEHLLG-------TDSLEGKTVAVQGLGKVGYKLAEHLLEEGAKLIVADINEEAVARAAELFGATVVAP 78 (200)
T ss_pred HHHHHHHHHHHHHHhcC-------CCCCCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHcCCEEEcc
Confidence 56777777765554211 25789999999999999999999999999999999999999999988876554444
Q ss_pred ccccccCCCCccEEEEcCCCCCCCCCCCCCCChhhhc--CCCEEEEEeeCCCc-hHHHHHHHHCCCeeeccHHHHHHHHH
Q 010101 418 EYLHEFFPEKGMILANASAIGMEPNSDQSPVPKEALK--AYELVFDAVYTPRN-TRLLREAAEVGATVVSGVEMFIRQAL 494 (518)
Q Consensus 418 ~~l~~~~~~~~divInatp~g~~~~~~~~~~~~~~l~--~~~~v~Di~Y~P~~-T~ll~~A~~~G~~~i~G~~ml~~Qa~ 494 (518)
+++. ..++|++++++.-+. +..+.+. +..+|++-.-+|.. -.--+.-+++|+.++|..-......+
T Consensus 79 ~~l~---~~~~Dv~vp~A~~~~--------I~~~~~~~l~~~~v~~~AN~~~~~~~~~~~L~~~Gi~~~Pd~~~NaGGv~ 147 (200)
T cd01075 79 EEIY---SVDADVFAPCALGGV--------INDDTIPQLKAKAIAGAANNQLADPRHGQMLHERGILYAPDYVVNAGGLI 147 (200)
T ss_pred hhhc---cccCCEEEecccccc--------cCHHHHHHcCCCEEEECCcCccCCHhHHHHHHHCCCEEeCceeeeCcCce
Confidence 4432 236899998876431 2332221 24678888878764 23334457889988874433333334
Q ss_pred HHHHHhcCC
Q 010101 495 GQFRLFTGG 503 (518)
Q Consensus 495 ~qf~lw~g~ 503 (518)
..+..|.|.
T Consensus 148 ~~~~e~~~~ 156 (200)
T cd01075 148 NVADELYGG 156 (200)
T ss_pred eehhHHhCC
Confidence 455556553
No 41
>PRK14194 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=98.43 E-value=6.8e-06 Score=82.78 Aligned_cols=199 Identities=17% Similarity=0.210 Sum_probs=126.6
Q ss_pred HHHHHHHcCCCceEEeccc----CcHHHHHHHh-cCCCCCEEEecccchHHHHhcccccChhhhhcCceeEEEEeccCC-
Q 010101 256 HNPAFRHTRFNGIYVPMLV----DDVKEFFRTY-SGTDFAGFSVGIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDG- 329 (518)
Q Consensus 256 hn~~f~~~gl~~~y~~~~~----~~l~~~~~~l-~~~~~~G~~VT~P~K~~v~~~~d~~~~~A~~iGavNTi~~~~~~g- 329 (518)
-.+..+++|++..-..++- +++.+.++.+ .++.+.|+.|-.|+-. ++| +. +.+.+++--. + -||
T Consensus 54 k~k~a~~~Gi~~~~~~l~~~~t~~~l~~~I~~lN~D~~V~GIlvqlPLP~----~i~---~~-~i~~~I~p~K-D-VDGl 123 (301)
T PRK14194 54 KILRAEEAGIRSLEHRLPADTSQARLLALIAELNADPSVNGILLQLPLPA----HID---EA-RVLQAINPLK-D-VDGF 123 (301)
T ss_pred HHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHcCCCCCCeEEEeCCCCC----CCC---HH-HHHhccCchh-c-cCcc
Confidence 3467889999987666653 3566777777 5778999999999742 121 11 1112222111 0 011
Q ss_pred ------eE-EEee----cCHHHHHHHHHHHHHhhccCCCCCCCCcccCCcEEEEEccc-hhHHHHHHHHHHCCCeEEEEe
Q 010101 330 ------KL-VGYN----TDCESAISAIEDALRERQGINGVASHTSPIAGKIFVLVGAG-GAGRALAFGAKSRGARVIIFN 397 (518)
Q Consensus 330 ------~l-~G~N----TD~~G~~~~l~~~l~~~~~~~~~~~~~~~l~~k~vlvlGaG-g~araia~~L~~~G~~v~i~n 397 (518)
++ .|.+ ---.|++.-|+. .+ .+++||+++|||.| -+|+.++..|.+.|+.|++++
T Consensus 124 ~~~N~g~l~~~~~~~~PcTp~aii~lL~~-----~~--------i~l~Gk~V~vIG~s~ivG~PmA~~L~~~gatVtv~~ 190 (301)
T PRK14194 124 HSENVGGLSQGRDVLTPCTPSGCLRLLED-----TC--------GDLTGKHAVVIGRSNIVGKPMAALLLQAHCSVTVVH 190 (301)
T ss_pred ChhhhhHHhcCCCCCCCCcHHHHHHHHHH-----hC--------CCCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEEC
Confidence 11 1111 115566666553 12 67899999999997 699999999999999999998
Q ss_pred CCHHHHHHHHHHhcCcccccccccccCCCCccEEEEcCCCCCCCCCCCCCCChhhhcCCCEEEEEeeCCC----------
Q 010101 398 RNYERAKALADAVSGEALHFEYLHEFFPEKGMILANASAIGMEPNSDQSPVPKEALKAYELVFDAVYTPR---------- 467 (518)
Q Consensus 398 Rt~~ka~~la~~~~~~~~~~~~l~~~~~~~~divInatp~g~~~~~~~~~~~~~~l~~~~~v~Di~Y~P~---------- 467 (518)
|+....++ ...++|+||.+++-. + .+...+++++.+|+|+..++.
T Consensus 191 ~~t~~l~e------------------~~~~ADIVIsavg~~--~-----~v~~~~ik~GaiVIDvgin~~~~~g~~kl~G 245 (301)
T PRK14194 191 SRSTDAKA------------------LCRQADIVVAAVGRP--R-----LIDADWLKPGAVVIDVGINRIDDDGRSRLVG 245 (301)
T ss_pred CCCCCHHH------------------HHhcCCEEEEecCCh--h-----cccHhhccCCcEEEEecccccCCCCCcceec
Confidence 86432211 234689999887532 1 356677899999999987752
Q ss_pred chHHHHHHHHCCCe-eec-cHH-----HHHHHHHHHHHHhcC
Q 010101 468 NTRLLREAAEVGAT-VVS-GVE-----MFIRQALGQFRLFTG 502 (518)
Q Consensus 468 ~T~ll~~A~~~G~~-~i~-G~~-----ml~~Qa~~qf~lw~g 502 (518)
+-.|-...+..++- -++ |.+ ||+...+.+.+.|.-
T Consensus 246 Dvdf~~~~~~a~~iTPVPGGVGp~Tva~L~~N~~~a~~~~~~ 287 (301)
T PRK14194 246 DVDFDSALPVVSAITPVPGGVGPMTIAFLMKNTVTAARLQAH 287 (301)
T ss_pred ccchHHHHhhcceecCCCCchhHHHHHHHHHHHHHHHHHHHH
Confidence 13342223334432 244 554 888888888888764
No 42
>cd01080 NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of methylene-tetrahydrofolate dehydrogenase/cyclohydrolase. NADP binding domain of the Methylene-Tetrahydrofolate Dehydrogenase/cyclohydrolase (m-THF DH/cyclohydrolase) bifunctional enzyme. Tetrahydrofolate is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofucntional DH, as well a
Probab=98.42 E-value=1.1e-06 Score=81.65 Aligned_cols=79 Identities=25% Similarity=0.248 Sum_probs=63.3
Q ss_pred cccCCcEEEEEccchh-HHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHhcCcccccccccccCCCCccEEEEcCCCCCCC
Q 010101 363 SPIAGKIFVLVGAGGA-GRALAFGAKSRGARVIIFNRNYERAKALADAVSGEALHFEYLHEFFPEKGMILANASAIGMEP 441 (518)
Q Consensus 363 ~~l~~k~vlvlGaGg~-araia~~L~~~G~~v~i~nRt~~ka~~la~~~~~~~~~~~~l~~~~~~~~divInatp~g~~~ 441 (518)
.++++++++|+|+|++ |+.++..|.+.|++|+++||+.+... + .+.++|+||+||+...
T Consensus 40 ~~l~gk~vlViG~G~~~G~~~a~~L~~~g~~V~v~~r~~~~l~-----------------~-~l~~aDiVIsat~~~~-- 99 (168)
T cd01080 40 IDLAGKKVVVVGRSNIVGKPLAALLLNRNATVTVCHSKTKNLK-----------------E-HTKQADIVIVAVGKPG-- 99 (168)
T ss_pred CCCCCCEEEEECCcHHHHHHHHHHHhhCCCEEEEEECCchhHH-----------------H-HHhhCCEEEEcCCCCc--
Confidence 4689999999999996 88899999999999999999854321 2 3456899999998532
Q ss_pred CCCCCCCChhhhcCCCEEEEEeeCC
Q 010101 442 NSDQSPVPKEALKAYELVFDAVYTP 466 (518)
Q Consensus 442 ~~~~~~~~~~~l~~~~~v~Di~Y~P 466 (518)
.+..+.++++.+++|+.-.+
T Consensus 100 -----ii~~~~~~~~~viIDla~pr 119 (168)
T cd01080 100 -----LVKGDMVKPGAVVIDVGINR 119 (168)
T ss_pred -----eecHHHccCCeEEEEccCCC
Confidence 36677788889999998644
No 43
>PRK10792 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=98.36 E-value=1.7e-05 Score=79.28 Aligned_cols=196 Identities=20% Similarity=0.266 Sum_probs=126.6
Q ss_pred HHHHHHHcCCCceEEeccc----CcHHHHHHHh-cCCCCCEEEecccchHHHHhcccccChhhhhcCceeEEEEeccCCe
Q 010101 256 HNPAFRHTRFNGIYVPMLV----DDVKEFFRTY-SGTDFAGFSVGIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGK 330 (518)
Q Consensus 256 hn~~f~~~gl~~~y~~~~~----~~l~~~~~~l-~~~~~~G~~VT~P~K~~v~~~~d~~~~~A~~iGavNTi~~~~~~g~ 330 (518)
-.+.++++|++.....++- +++.+.++.+ .+++..|+.|-.|+-..+ | +. +.+.+++--. + -||
T Consensus 54 k~k~a~~~Gi~~~~~~l~~~~s~~el~~~I~~lN~d~~V~GIlvqlPLP~~~----~---~~-~i~~~I~p~K-D-VDG- 122 (285)
T PRK10792 54 KRKACEEVGFVSRSYDLPETTSEAELLALIDELNADPTIDGILVQLPLPAHI----D---NV-KVLERIHPDK-D-VDG- 122 (285)
T ss_pred HHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCCCCCCEEEEeCCCCCCC----C---HH-HHHhccCccc-c-cCc-
Confidence 3467899999987776653 3577777777 477899999999975321 1 11 1222222111 1 011
Q ss_pred EEEee-------------cCHHHHHHHHHHHHHhhccCCCCCCCCcccCCcEEEEEccch-hHHHHHHHHHHCCCeEEEE
Q 010101 331 LVGYN-------------TDCESAISAIEDALRERQGINGVASHTSPIAGKIFVLVGAGG-AGRALAFGAKSRGARVIIF 396 (518)
Q Consensus 331 l~G~N-------------TD~~G~~~~l~~~l~~~~~~~~~~~~~~~l~~k~vlvlGaGg-~araia~~L~~~G~~v~i~ 396 (518)
++-+| ---.|++..|+. . ..+++||+++|+|-|. .|+.++.-|...|+.|+++
T Consensus 123 l~~~n~g~l~~~~~~~~PcTp~av~~ll~~-----~--------~i~l~Gk~vvViGrs~iVG~Pla~lL~~~~atVtv~ 189 (285)
T PRK10792 123 FHPYNVGRLAQRIPLLRPCTPRGIMTLLER-----Y--------GIDTYGLNAVVVGASNIVGRPMSLELLLAGCTVTVC 189 (285)
T ss_pred cChhhHhHHhCCCCCCCCCCHHHHHHHHHH-----c--------CCCCCCCEEEEECCCcccHHHHHHHHHHCCCeEEEE
Confidence 11111 124566666543 1 2678999999999998 9999999999999999999
Q ss_pred eCCHHHHHHHHHHhcCcccccccccccCCCCccEEEEcCCCCCCCCCCCCCCChhhhcCCCEEEEEeeCCC-------ch
Q 010101 397 NRNYERAKALADAVSGEALHFEYLHEFFPEKGMILANASAIGMEPNSDQSPVPKEALKAYELVFDAVYTPR-------NT 469 (518)
Q Consensus 397 nRt~~ka~~la~~~~~~~~~~~~l~~~~~~~~divInatp~g~~~~~~~~~~~~~~l~~~~~v~Di~Y~P~-------~T 469 (518)
.+.... +.+ ...++|+||+|++. |. .+..++++++.+|+|+-.++. ..
T Consensus 190 hs~T~~-----------------l~~-~~~~ADIvi~avG~---p~----~v~~~~vk~gavVIDvGin~~~~gk~~GDv 244 (285)
T PRK10792 190 HRFTKN-----------------LRH-HVRNADLLVVAVGK---PG----FIPGEWIKPGAIVIDVGINRLEDGKLVGDV 244 (285)
T ss_pred ECCCCC-----------------HHH-HHhhCCEEEEcCCC---cc----cccHHHcCCCcEEEEcccccccCCCcCCCc
Confidence 875221 222 34568999999853 22 367789999999999987752 24
Q ss_pred HHHHHHHHC-C-Ceeec-c-----HHHHHHHHHHHHHHhc
Q 010101 470 RLLREAAEV-G-ATVVS-G-----VEMFIRQALGQFRLFT 501 (518)
Q Consensus 470 ~ll~~A~~~-G-~~~i~-G-----~~ml~~Qa~~qf~lw~ 501 (518)
.| +.+++. . +.-++ | ..||+...+.+.+.|.
T Consensus 245 d~-~~~~~~a~~itPvPGGVGp~T~a~L~~N~~~a~~~~~ 283 (285)
T PRK10792 245 EF-ETAAERASWITPVPGGVGPMTVATLLENTLQACEEYH 283 (285)
T ss_pred CH-HHHHhhccCcCCCCCCChHHHHHHHHHHHHHHHHHhh
Confidence 44 333332 2 22233 3 4588888888888775
No 44
>TIGR00518 alaDH alanine dehydrogenase. The family of known L-alanine dehydrogenases includes representatives from the Proteobacteria, Firmicutes, and Cyanobacteria, all with about 50 % identity or better. An outlier to this group in both sequence and gap pattern is the homolog from Helicobacter pylori, an epsilon division Proteobacteria, which must be considered a putative alanine dehydrogenase. Related proteins include saccharopine dehydrogenase and the N-terminal half of the NAD(P) transhydrogenase alpha subunit. All of these related proteins bind NAD and/or NADP.
Probab=98.34 E-value=2.5e-06 Score=89.33 Aligned_cols=100 Identities=20% Similarity=0.266 Sum_probs=74.0
Q ss_pred cCCcEEEEEccchhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHhcCcc----cccccccccCCCCccEEEEcCCC-CC
Q 010101 365 IAGKIFVLVGAGGAGRALAFGAKSRGARVIIFNRNYERAKALADAVSGEA----LHFEYLHEFFPEKGMILANASAI-GM 439 (518)
Q Consensus 365 l~~k~vlvlGaGg~araia~~L~~~G~~v~i~nRt~~ka~~la~~~~~~~----~~~~~l~~~~~~~~divInatp~-g~ 439 (518)
+.+++++|+|+|++|+.++..|..+|++|++++|+.++++.+++.++... ...+++.+ .+.++|+||||++. |.
T Consensus 165 l~~~~VlViGaG~vG~~aa~~a~~lGa~V~v~d~~~~~~~~l~~~~g~~v~~~~~~~~~l~~-~l~~aDvVI~a~~~~g~ 243 (370)
T TIGR00518 165 VEPGDVTIIGGGVVGTNAAKMANGLGATVTILDINIDRLRQLDAEFGGRIHTRYSNAYEIED-AVKRADLLIGAVLIPGA 243 (370)
T ss_pred CCCceEEEEcCCHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHhcCceeEeccCCHHHHHH-HHccCCEEEEccccCCC
Confidence 45678999999999999999999999999999999999998888776421 12233434 35679999999865 32
Q ss_pred CCCCCCCCCChh---hhcCCCEEEEEeeCCCc
Q 010101 440 EPNSDQSPVPKE---ALKAYELVFDAVYTPRN 468 (518)
Q Consensus 440 ~~~~~~~~~~~~---~l~~~~~v~Di~Y~P~~ 468 (518)
. . +..+..+ .++++.+++|+.+.|..
T Consensus 244 ~-~--p~lit~~~l~~mk~g~vIvDva~d~GG 272 (370)
T TIGR00518 244 K-A--PKLVSNSLVAQMKPGAVIVDVAIDQGG 272 (370)
T ss_pred C-C--CcCcCHHHHhcCCCCCEEEEEecCCCC
Confidence 1 1 1123443 25678999999987653
No 45
>PRK08618 ornithine cyclodeaminase; Validated
Probab=98.32 E-value=1.5e-06 Score=89.41 Aligned_cols=89 Identities=24% Similarity=0.334 Sum_probs=67.8
Q ss_pred CCcEEEEEccchhHHHHHHHHH-HCCC-eEEEEeCCHHHHHHHHHHhcC----cccccccccccCCCCccEEEEcCCCCC
Q 010101 366 AGKIFVLVGAGGAGRALAFGAK-SRGA-RVIIFNRNYERAKALADAVSG----EALHFEYLHEFFPEKGMILANASAIGM 439 (518)
Q Consensus 366 ~~k~vlvlGaGg~araia~~L~-~~G~-~v~i~nRt~~ka~~la~~~~~----~~~~~~~l~~~~~~~~divInatp~g~ 439 (518)
..++++|+|+|++|++.+.++. ..++ +|+|+||++++++++++++.. ....++++++ ...++|+||+|||.+
T Consensus 126 ~~~~v~iiGaG~~a~~~~~al~~~~~~~~v~v~~r~~~~a~~~~~~~~~~~~~~~~~~~~~~~-~~~~aDiVi~aT~s~- 203 (325)
T PRK08618 126 DAKTLCLIGTGGQAKGQLEAVLAVRDIERVRVYSRTFEKAYAFAQEIQSKFNTEIYVVNSADE-AIEEADIIVTVTNAK- 203 (325)
T ss_pred CCcEEEEECCcHHHHHHHHHHHhcCCccEEEEECCCHHHHHHHHHHHHHhcCCcEEEeCCHHH-HHhcCCEEEEccCCC-
Confidence 3578999999999999998876 4688 999999999999999987642 2223444444 456799999999966
Q ss_pred CCCCCCCCCChhhhcCCCEEEEE
Q 010101 440 EPNSDQSPVPKEALKAYELVFDA 462 (518)
Q Consensus 440 ~~~~~~~~~~~~~l~~~~~v~Di 462 (518)
.| .+. ++++++..|.=+
T Consensus 204 ~p-----~i~-~~l~~G~hV~~i 220 (325)
T PRK08618 204 TP-----VFS-EKLKKGVHINAV 220 (325)
T ss_pred Cc-----chH-HhcCCCcEEEec
Confidence 33 256 788887766544
No 46
>PRK07340 ornithine cyclodeaminase; Validated
Probab=98.26 E-value=4.2e-06 Score=85.38 Aligned_cols=97 Identities=22% Similarity=0.199 Sum_probs=68.9
Q ss_pred CCcEEEEEccchhHHHHHHHHHH-CCC-eEEEEeCCHHHHHHHHHHhcCcccc--cccccccCCCCccEEEEcCCCCCCC
Q 010101 366 AGKIFVLVGAGGAGRALAFGAKS-RGA-RVIIFNRNYERAKALADAVSGEALH--FEYLHEFFPEKGMILANASAIGMEP 441 (518)
Q Consensus 366 ~~k~vlvlGaGg~araia~~L~~-~G~-~v~i~nRt~~ka~~la~~~~~~~~~--~~~l~~~~~~~~divInatp~g~~~ 441 (518)
..++++|+|+|++|++.+.++.. .+. +|+|+||++++++++++++...... .+++.+ ...++|+||+|||.. .|
T Consensus 124 ~~~~v~IiGaG~qa~~~~~al~~~~~~~~v~v~~r~~~~a~~~a~~~~~~~~~~~~~~~~~-av~~aDiVitaT~s~-~P 201 (304)
T PRK07340 124 PPGDLLLIGTGVQARAHLEAFAAGLPVRRVWVRGRTAASAAAFCAHARALGPTAEPLDGEA-IPEAVDLVVTATTSR-TP 201 (304)
T ss_pred CCCEEEEECCcHHHHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHHHhcCCeeEECCHHH-HhhcCCEEEEccCCC-Cc
Confidence 46899999999999999999975 677 8999999999999999988532111 233443 456899999999865 23
Q ss_pred CCCCCCCChhhhcCCCEEEEE-eeCCCchH
Q 010101 442 NSDQSPVPKEALKAYELVFDA-VYTPRNTR 470 (518)
Q Consensus 442 ~~~~~~~~~~~l~~~~~v~Di-~Y~P~~T~ 470 (518)
. +.. +++++..+.=+ .|.|....
T Consensus 202 l-----~~~-~~~~g~hi~~iGs~~p~~~E 225 (304)
T PRK07340 202 V-----YPE-AARAGRLVVAVGAFTPDMAE 225 (304)
T ss_pred e-----eCc-cCCCCCEEEecCCCCCCccc
Confidence 2 233 46666544433 34454433
No 47
>PRK14189 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=98.23 E-value=2.8e-05 Score=77.90 Aligned_cols=204 Identities=17% Similarity=0.221 Sum_probs=124.7
Q ss_pred HHHHHHHcCCCceEEeccc----CcHHHHHHHh-cCCCCCEEEecccchHHH--HhcccccChhhhhcCceeEEEEeccC
Q 010101 256 HNPAFRHTRFNGIYVPMLV----DDVKEFFRTY-SGTDFAGFSVGIPHKEPA--VACCDEVHPLAKSIGAVNTIIRRPID 328 (518)
Q Consensus 256 hn~~f~~~gl~~~y~~~~~----~~l~~~~~~l-~~~~~~G~~VT~P~K~~v--~~~~d~~~~~A~~iGavNTi~~~~~~ 328 (518)
--+.++++|++.....++- +++.+.++.+ .+.++.|+.|-.|+-..+ ...++.++|. |-+-..+.. +-
T Consensus 53 k~k~~~~~Gi~~~~~~l~~~~~~~~l~~~I~~lN~d~~V~GIlvq~Plp~~i~~~~i~~~I~p~-KDVDGl~~~----n~ 127 (285)
T PRK14189 53 KVKACEDNGFHSLKDRYPADLSEAELLARIDELNRDPKIHGILVQLPLPKHIDSHKVIEAIAPE-KDVDGFHVA----NA 127 (285)
T ss_pred HHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHcCCCCCCeEEEeCCCCCCCCHHHHHhhcCcc-cCcccCChh----hh
Confidence 3467899999987766663 3577777777 467899999999975221 1111111111 111111110 00
Q ss_pred CeE-EEee----cCHHHHHHHHHHHHHhhccCCCCCCCCcccCCcEEEEEccchh-HHHHHHHHHHCCCeEEEEeCCHHH
Q 010101 329 GKL-VGYN----TDCESAISAIEDALRERQGINGVASHTSPIAGKIFVLVGAGGA-GRALAFGAKSRGARVIIFNRNYER 402 (518)
Q Consensus 329 g~l-~G~N----TD~~G~~~~l~~~l~~~~~~~~~~~~~~~l~~k~vlvlGaGg~-araia~~L~~~G~~v~i~nRt~~k 402 (518)
|++ .|.+ ---.|+++-|+. .+ .++.||+++|+|.|+. |+.++.-|...|+.|+++.+...
T Consensus 128 g~l~~~~~~~~PcTp~aii~lL~~-----~~--------i~l~Gk~vvViGrs~iVGkPla~lL~~~~atVt~~hs~t~- 193 (285)
T PRK14189 128 GALMTGQPLFRPCTPYGVMKMLES-----IG--------IPLRGAHAVVIGRSNIVGKPMAMLLLQAGATVTICHSKTR- 193 (285)
T ss_pred hHhhCCCCCCcCCCHHHHHHHHHH-----cC--------CCCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEecCCCC-
Confidence 111 1111 114566665543 12 6789999999999996 99999999999999999875321
Q ss_pred HHHHHHHhcCcccccccccccCCCCccEEEEcCCCCCCCCCCCCCCChhhhcCCCEEEEEeeCCC-------chHHHHHH
Q 010101 403 AKALADAVSGEALHFEYLHEFFPEKGMILANASAIGMEPNSDQSPVPKEALKAYELVFDAVYTPR-------NTRLLREA 475 (518)
Q Consensus 403 a~~la~~~~~~~~~~~~l~~~~~~~~divInatp~g~~~~~~~~~~~~~~l~~~~~v~Di~Y~P~-------~T~ll~~A 475 (518)
++.+ ...++|+||.|++. |. .+..++++++.+|+|+-.++. +..|-...
T Consensus 194 ----------------~l~~-~~~~ADIVV~avG~---~~----~i~~~~ik~gavVIDVGin~~~~gkl~GDVd~~~v~ 249 (285)
T PRK14189 194 ----------------DLAA-HTRQADIVVAAVGK---RN----VLTADMVKPGATVIDVGMNRDDAGKLCGDVDFAGVK 249 (285)
T ss_pred ----------------CHHH-HhhhCCEEEEcCCC---cC----ccCHHHcCCCCEEEEccccccCCCCeeCCccHHHHH
Confidence 1222 34678999998872 32 377889999999999987762 12332222
Q ss_pred HHCCC-e-eeccHH-----HHHHHHHHHHHHhcC
Q 010101 476 AEVGA-T-VVSGVE-----MFIRQALGQFRLFTG 502 (518)
Q Consensus 476 ~~~G~-~-~i~G~~-----ml~~Qa~~qf~lw~g 502 (518)
+..++ . +=.|.+ ||+...+.+.+.+.+
T Consensus 250 ~~a~~iTPVPGGVGp~T~a~Ll~N~~~a~~~~~~ 283 (285)
T PRK14189 250 EVAGYITPVPGGVGPMTITMLLVNTIEAAERAAA 283 (285)
T ss_pred hhceEecCCCCCchHHHHHHHHHHHHHHHHHhhc
Confidence 23333 2 334544 888887777665543
No 48
>cd05191 NAD_bind_amino_acid_DH NAD(P) binding domain of amino acid dehydrogenase-like proteins. Amino acid dehydrogenase(DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and are found in glutamate, leucine, and phenylalanine DHs (DHs), methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily includes a wide variety of protein families including NAD(P)- binding domains of alcohol DHs, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate DH, lactate/malate DHs, formate/glycerate DHs, siroheme synthases, 6-phosphogluconate DH, amino acid DHs, repressor rex, NAD-binding potassium channel domain, CoA-binding, and ornithine cyclodeaminase-like domains. These domains have an al
Probab=98.23 E-value=1.3e-05 Score=65.92 Aligned_cols=79 Identities=25% Similarity=0.435 Sum_probs=61.1
Q ss_pred HHHHHHHHHHHHHhhccCCCCCCCCcccCCcEEEEEccchhHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHHhcCcccc
Q 010101 338 CESAISAIEDALRERQGINGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGA-RVIIFNRNYERAKALADAVSGEALH 416 (518)
Q Consensus 338 ~~G~~~~l~~~l~~~~~~~~~~~~~~~l~~k~vlvlGaGg~araia~~L~~~G~-~v~i~nRt~~ka~~la~~~~~~~~~ 416 (518)
+.|.+..|+...+.. ..++++++++|+|+|++|+.++..|.+.|. +|+++||
T Consensus 3 ~~~~~~~l~~~~~~~---------~~~~~~~~v~i~G~G~~g~~~a~~l~~~~~~~v~v~~r------------------ 55 (86)
T cd05191 3 AAGAVALLKAAGKVT---------NKSLKGKTVVVLGAGEVGKGIAKLLADEGGKKVVLCDR------------------ 55 (86)
T ss_pred hHHHHHHHHHHHHHh---------CCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcC------------------
Confidence 567777777654321 146789999999999999999999999865 9999998
Q ss_pred cccccccCCCCccEEEEcCCCCCCCCCCCCCCCh---hhhcCCCEEEEE
Q 010101 417 FEYLHEFFPEKGMILANASAIGMEPNSDQSPVPK---EALKAYELVFDA 462 (518)
Q Consensus 417 ~~~l~~~~~~~~divInatp~g~~~~~~~~~~~~---~~l~~~~~v~Di 462 (518)
|++|++|+.+.. +.+ ..+.+..+|+|+
T Consensus 56 ------------di~i~~~~~~~~-------~~~~~~~~~~~~~~v~~~ 85 (86)
T cd05191 56 ------------DILVTATPAGVP-------VLEEATAKINEGAVVIDL 85 (86)
T ss_pred ------------CEEEEcCCCCCC-------chHHHHHhcCCCCEEEec
Confidence 899999986532 223 456778889986
No 49
>PRK14179 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=98.22 E-value=3.4e-05 Score=77.21 Aligned_cols=197 Identities=20% Similarity=0.243 Sum_probs=123.3
Q ss_pred HHHHHHcCCCceEEeccc----CcHHHHHHHh-cCCCCCEEEecccchHHHHhcccccChhhhhcCceeEEEEeccCCeE
Q 010101 257 NPAFRHTRFNGIYVPMLV----DDVKEFFRTY-SGTDFAGFSVGIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKL 331 (518)
Q Consensus 257 n~~f~~~gl~~~y~~~~~----~~l~~~~~~l-~~~~~~G~~VT~P~K~~v~~~~d~~~~~A~~iGavNTi~~~~~~g~l 331 (518)
.+..+++|++.....++- +++.+.++.+ .++.+.|+.|-.|+-..+ | + -+.+.+++-- ++ -|| +
T Consensus 54 ~k~~~~~Gi~~~~~~l~~~~~~~~l~~~I~~lN~d~~V~GIivqlPlp~~i----~---~-~~i~~~I~p~-KD-VDG-l 122 (284)
T PRK14179 54 ERSALAAGFKSEVVRLPETISQEELLDLIERYNQDPTWHGILVQLPLPKHI----N---E-EKILLAIDPK-KD-VDG-F 122 (284)
T ss_pred HHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCCCCCCEEEEcCCCCCCC----C---H-HHHHhccCcc-cc-ccc-c
Confidence 377899999988777763 3566677766 567899999999975322 1 1 1111111111 00 011 2
Q ss_pred EEee-------------cCHHHHHHHHHHHHHhhccCCCCCCCCcccCCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEe
Q 010101 332 VGYN-------------TDCESAISAIEDALRERQGINGVASHTSPIAGKIFVLVGA-GGAGRALAFGAKSRGARVIIFN 397 (518)
Q Consensus 332 ~G~N-------------TD~~G~~~~l~~~l~~~~~~~~~~~~~~~l~~k~vlvlGa-Gg~araia~~L~~~G~~v~i~n 397 (518)
+-+| ---.|++.-|+. .+ .+++||+++|||. |-+|+.++..|.+.|+.|+++.
T Consensus 123 ~~~N~g~l~~~~~~~~PcTp~avi~lL~~-----~~--------i~l~Gk~v~vIG~S~ivG~Pla~lL~~~gatVtv~~ 189 (284)
T PRK14179 123 HPMNTGHLWSGRPVMIPCTPAGIMEMFRE-----YN--------VELEGKHAVVIGRSNIVGKPMAQLLLDKNATVTLTH 189 (284)
T ss_pred CHhhHHHHhCCCCCCcCCCHHHHHHHHHH-----hC--------CCCCCCEEEEECCCCcCcHHHHHHHHHCCCEEEEEC
Confidence 2222 123455555543 12 6789999999999 6699999999999999999983
Q ss_pred CCHHHHHHHHHHhcCcccccccccccCCCCccEEEEcCCCCCCCCCCCCCCChhhhcCCCEEEEEeeCCC-------chH
Q 010101 398 RNYERAKALADAVSGEALHFEYLHEFFPEKGMILANASAIGMEPNSDQSPVPKEALKAYELVFDAVYTPR-------NTR 470 (518)
Q Consensus 398 Rt~~ka~~la~~~~~~~~~~~~l~~~~~~~~divInatp~g~~~~~~~~~~~~~~l~~~~~v~Di~Y~P~-------~T~ 470 (518)
.. .+. +.+ ...++|+||.+++.. . .+..++++++.+|+|+-.++. +-.
T Consensus 190 s~---t~~--------------l~~-~~~~ADIVI~avg~~---~----~v~~~~ik~GavVIDvgin~~~~gkl~GDVd 244 (284)
T PRK14179 190 SR---TRN--------------LAE-VARKADILVVAIGRG---H----FVTKEFVKEGAVVIDVGMNRDENGKLIGDVD 244 (284)
T ss_pred CC---CCC--------------HHH-HHhhCCEEEEecCcc---c----cCCHHHccCCcEEEEecceecCCCCeecCcc
Confidence 21 111 111 235689999887532 1 366778999999999988762 123
Q ss_pred HHHHHHHCCC-e-eeccHH-----HHHHHHHHHHHHhcC
Q 010101 471 LLREAAEVGA-T-VVSGVE-----MFIRQALGQFRLFTG 502 (518)
Q Consensus 471 ll~~A~~~G~-~-~i~G~~-----ml~~Qa~~qf~lw~g 502 (518)
|-...+..++ . +=.|.+ ||+...+.+.+.|..
T Consensus 245 f~~v~~~a~~iTPVPGGVGp~T~a~L~~N~~~a~~~~~~ 283 (284)
T PRK14179 245 FDEVAEVASYITPVPGGVGPMTITMLMEQTYQAALRSLH 283 (284)
T ss_pred HHHHHhhccEecCCCCCchHHHHHHHHHHHHHHHHHHhc
Confidence 3222222333 2 334544 888888888888763
No 50
>PRK14982 acyl-ACP reductase; Provisional
Probab=98.17 E-value=5.6e-06 Score=85.09 Aligned_cols=110 Identities=22% Similarity=0.301 Sum_probs=79.5
Q ss_pred cccCCcEEEEEcc-chhHHHHHHHHHH-CCC-eEEEEeCCHHHHHHHHHHhcC-cccccccccccCCCCccEEEEcCCCC
Q 010101 363 SPIAGKIFVLVGA-GGAGRALAFGAKS-RGA-RVIIFNRNYERAKALADAVSG-EALHFEYLHEFFPEKGMILANASAIG 438 (518)
Q Consensus 363 ~~l~~k~vlvlGa-Gg~araia~~L~~-~G~-~v~i~nRt~~ka~~la~~~~~-~~~~~~~l~~~~~~~~divInatp~g 438 (518)
..+++++++|+|| |.+|+.++..|.. .|+ +|+++||+.++++.++++++. ...+ +.+ ...++|+||.+|+..
T Consensus 151 ~~l~~k~VLVtGAtG~IGs~lar~L~~~~gv~~lilv~R~~~rl~~La~el~~~~i~~---l~~-~l~~aDiVv~~ts~~ 226 (340)
T PRK14982 151 IDLSKATVAVVGATGDIGSAVCRWLDAKTGVAELLLVARQQERLQELQAELGGGKILS---LEE-ALPEADIVVWVASMP 226 (340)
T ss_pred cCcCCCEEEEEccChHHHHHHHHHHHhhCCCCEEEEEcCCHHHHHHHHHHhccccHHh---HHH-HHccCCEEEECCcCC
Confidence 3578999999999 6799999999985 477 999999999999999988752 2222 333 456789999999764
Q ss_pred CCCCCCCCCCChhhhcCCCEEEEEeeCCCchHHHHHHHHCCCeeec
Q 010101 439 MEPNSDQSPVPKEALKAYELVFDAVYTPRNTRLLREAAEVGATVVS 484 (518)
Q Consensus 439 ~~~~~~~~~~~~~~l~~~~~v~Di~Y~P~~T~ll~~A~~~G~~~i~ 484 (518)
.. ..+.++.++++.+++|+.+-...-|-. ++ -|+.+++
T Consensus 227 ~~-----~~I~~~~l~~~~~viDiAvPRDVd~~v--~~-~~V~v~~ 264 (340)
T PRK14982 227 KG-----VEIDPETLKKPCLMIDGGYPKNLDTKV--QG-PGIHVLK 264 (340)
T ss_pred cC-----CcCCHHHhCCCeEEEEecCCCCCCccc--CC-CCEEEEe
Confidence 21 125556678889999998743322211 22 6777744
No 51
>PLN02819 lysine-ketoglutarate reductase/saccharopine dehydrogenase
Probab=98.13 E-value=4.7e-06 Score=96.48 Aligned_cols=126 Identities=19% Similarity=0.234 Sum_probs=93.7
Q ss_pred CCcEEEEEccchhHHHHHHHHHHCCC-e-------------EEEEeCCHHHHHHHHHHh-cCcccc--c---ccccccCC
Q 010101 366 AGKIFVLVGAGGAGRALAFGAKSRGA-R-------------VIIFNRNYERAKALADAV-SGEALH--F---EYLHEFFP 425 (518)
Q Consensus 366 ~~k~vlvlGaGg~araia~~L~~~G~-~-------------v~i~nRt~~ka~~la~~~-~~~~~~--~---~~l~~~~~ 425 (518)
..|+|+|||||.+|+.++..|++..- + |+|++++.++++++++.+ +...+. + +++.. ..
T Consensus 568 ~~~rIlVLGAG~VG~~~a~~La~~~~~~~~~~~~~~~~~~lV~VaD~~~~~a~~la~~~~~~~~v~lDv~D~e~L~~-~v 646 (1042)
T PLN02819 568 KSQNVLILGAGRVCRPAAEYLASVKTISYYGDDSEEPTDVHVIVASLYLKDAKETVEGIENAEAVQLDVSDSESLLK-YV 646 (1042)
T ss_pred cCCcEEEECCCHHHHHHHHHHHhCcCccccccccccccccEEEEECCCHHHHHHHHHhcCCCceEEeecCCHHHHHH-hh
Confidence 46799999999999999999987542 4 999999999999999887 433222 2 23333 23
Q ss_pred CCccEEEEcCCCCCCCCCCCCCCChhhhcCCCEEEEEeeC-CCchHHHHHHHHCCCeeeccHH-------HHHHHHHHHH
Q 010101 426 EKGMILANASAIGMEPNSDQSPVPKEALKAYELVFDAVYT-PRNTRLLREAAEVGATVVSGVE-------MFIRQALGQF 497 (518)
Q Consensus 426 ~~~divInatp~g~~~~~~~~~~~~~~l~~~~~v~Di~Y~-P~~T~ll~~A~~~G~~~i~G~~-------ml~~Qa~~qf 497 (518)
.++|+||+++|..++. ++...++..+.-++|..|. +....+.++|+++|..+++|.. |+..+.+.++
T Consensus 647 ~~~DaVIsalP~~~H~-----~VAkaAieaGkHvv~eky~~~e~~~L~e~Ak~AGV~~m~e~GlDPGid~~lA~~~Id~~ 721 (1042)
T PLN02819 647 SQVDVVISLLPASCHA-----VVAKACIELKKHLVTASYVSEEMSALDSKAKEAGITILCEMGLDPGIDHMMAMKMIDDA 721 (1042)
T ss_pred cCCCEEEECCCchhhH-----HHHHHHHHcCCCEEECcCCHHHHHHHHHHHHHcCCEEEECCccCHHHHHHHHHHHHHhh
Confidence 5699999999986543 2455677777778899987 4455778899999988776544 6666666665
No 52
>PRK14176 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=98.13 E-value=4e-05 Score=76.68 Aligned_cols=168 Identities=20% Similarity=0.282 Sum_probs=107.7
Q ss_pred HHHHHHHcCCCceEEeccc----CcHHHHHHHh-cCCCCCEEEecccchHHH--HhcccccChhhhhcCceeEEEEeccC
Q 010101 256 HNPAFRHTRFNGIYVPMLV----DDVKEFFRTY-SGTDFAGFSVGIPHKEPA--VACCDEVHPLAKSIGAVNTIIRRPID 328 (518)
Q Consensus 256 hn~~f~~~gl~~~y~~~~~----~~l~~~~~~l-~~~~~~G~~VT~P~K~~v--~~~~d~~~~~A~~iGavNTi~~~~~~ 328 (518)
-.+.++++|++.....++- +++...++.+ .+.++.|+.|-.|+...+ ...++.++|. +-+-..+-. +-
T Consensus 59 k~k~~~~~Gi~~~~~~l~~~~~~~el~~~I~~LN~D~~V~GIlvqlPLP~~i~~~~i~~~I~p~-KDVDGl~~~----N~ 133 (287)
T PRK14176 59 KHKACERVGIRAEDQFLPADTTQEELLELIDSLNKRKDVHGILLQLPLPKHLDPQEAMEAIDPA-KDADGFHPY----NM 133 (287)
T ss_pred HHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCCCCCCeEEEcCCCCCCCCHHHHHhccCcc-ccccccChh----hh
Confidence 3477899999988777754 2566777777 577899999999975322 1111111111 110000000 00
Q ss_pred CeEE-Ee----ecCHHHHHHHHHHHHHhhccCCCCCCCCcccCCcEEEEEccch-hHHHHHHHHHHCCCeEEEEeCCHHH
Q 010101 329 GKLV-GY----NTDCESAISAIEDALRERQGINGVASHTSPIAGKIFVLVGAGG-AGRALAFGAKSRGARVIIFNRNYER 402 (518)
Q Consensus 329 g~l~-G~----NTD~~G~~~~l~~~l~~~~~~~~~~~~~~~l~~k~vlvlGaGg-~araia~~L~~~G~~v~i~nRt~~k 402 (518)
|++. |. ----.|++..|+. .+ .+++||+++|+|.|. .|+.++.-|...|+.|++++....
T Consensus 134 g~l~~g~~~~~PcTp~av~~ll~~-----~~--------i~l~Gk~vvViGrs~iVGkPla~lL~~~~atVtv~hs~T~- 199 (287)
T PRK14176 134 GKLMIGDEGLVPCTPHGVIRALEE-----YG--------VDIEGKNAVIVGHSNVVGKPMAAMLLNRNATVSVCHVFTD- 199 (287)
T ss_pred hhHhcCCCCCCCCcHHHHHHHHHH-----cC--------CCCCCCEEEEECCCcccHHHHHHHHHHCCCEEEEEeccCC-
Confidence 1111 11 1124566666543 12 678999999999998 999999999999999999984322
Q ss_pred HHHHHHHhcCcccccccccccCCCCccEEEEcCCCCCCCCCCCCCCChhhhcCCCEEEEEeeCC
Q 010101 403 AKALADAVSGEALHFEYLHEFFPEKGMILANASAIGMEPNSDQSPVPKEALKAYELVFDAVYTP 466 (518)
Q Consensus 403 a~~la~~~~~~~~~~~~l~~~~~~~~divInatp~g~~~~~~~~~~~~~~l~~~~~v~Di~Y~P 466 (518)
++.+ ...++|+||+|+.. |. .+..++++++.+|+|+-.+.
T Consensus 200 ----------------~l~~-~~~~ADIvv~AvG~---p~----~i~~~~vk~gavVIDvGin~ 239 (287)
T PRK14176 200 ----------------DLKK-YTLDADILVVATGV---KH----LIKADMVKEGAVIFDVGITK 239 (287)
T ss_pred ----------------CHHH-HHhhCCEEEEccCC---cc----ccCHHHcCCCcEEEEecccc
Confidence 1122 33568999998853 22 36788999999999998764
No 53
>PRK14190 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=98.11 E-value=0.00015 Score=72.63 Aligned_cols=203 Identities=17% Similarity=0.247 Sum_probs=125.7
Q ss_pred HHHHHHcCCCceEEeccc----CcHHHHHHHh-cCCCCCEEEecccchHHH--HhcccccChhhhhcCceeEEEEeccCC
Q 010101 257 NPAFRHTRFNGIYVPMLV----DDVKEFFRTY-SGTDFAGFSVGIPHKEPA--VACCDEVHPLAKSIGAVNTIIRRPIDG 329 (518)
Q Consensus 257 n~~f~~~gl~~~y~~~~~----~~l~~~~~~l-~~~~~~G~~VT~P~K~~v--~~~~d~~~~~A~~iGavNTi~~~~~~g 329 (518)
.+..+++|++.....++- +++.+.++.+ .+.++.|+-|-+|+...+ ...++.++|. |-+-..+..- -|
T Consensus 54 ~k~a~~~Gi~~~~~~l~~~~~~~el~~~I~~lN~D~~V~GIlvq~PLp~~i~~~~i~~~I~p~-KDVDGl~~~n----~g 128 (284)
T PRK14190 54 KKAAEKVGIYSELYEFPADITEEELLALIDRLNADPRINGILVQLPLPKHIDEKAVIERISPE-KDVDGFHPIN----VG 128 (284)
T ss_pred HHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCCCCCCEEEEeCCCCCCCCHHHHHhcCCcc-ccccccCHhh----HH
Confidence 467899999987776664 2577777777 577899999999975321 1111111111 1111111100 01
Q ss_pred eE-EEe----ecCHHHHHHHHHHHHHhhccCCCCCCCCcccCCcEEEEEccch-hHHHHHHHHHHCCCeEEEEeCCHHHH
Q 010101 330 KL-VGY----NTDCESAISAIEDALRERQGINGVASHTSPIAGKIFVLVGAGG-AGRALAFGAKSRGARVIIFNRNYERA 403 (518)
Q Consensus 330 ~l-~G~----NTD~~G~~~~l~~~l~~~~~~~~~~~~~~~l~~k~vlvlGaGg-~araia~~L~~~G~~v~i~nRt~~ka 403 (518)
++ .|. ----.|++.-|+. .+ .+++||+++|+|.+. .||.++.-|.+.|+.|+++......
T Consensus 129 ~l~~~~~~~~PcTp~av~~lL~~-----~~--------i~l~Gk~vvViGrS~iVG~Pla~lL~~~~atVt~chs~t~~- 194 (284)
T PRK14190 129 RMMLGQDTFLPCTPHGILELLKE-----YN--------IDISGKHVVVVGRSNIVGKPVGQLLLNENATVTYCHSKTKN- 194 (284)
T ss_pred HHhcCCCCCCCCCHHHHHHHHHH-----cC--------CCCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEEeCCchh-
Confidence 11 110 0124455555443 12 678999999999986 9999999999999999999643221
Q ss_pred HHHHHHhcCcccccccccccCCCCccEEEEcCCCCCCCCCCCCCCChhhhcCCCEEEEEeeCCCc-------hHHHHHHH
Q 010101 404 KALADAVSGEALHFEYLHEFFPEKGMILANASAIGMEPNSDQSPVPKEALKAYELVFDAVYTPRN-------TRLLREAA 476 (518)
Q Consensus 404 ~~la~~~~~~~~~~~~l~~~~~~~~divInatp~g~~~~~~~~~~~~~~l~~~~~v~Di~Y~P~~-------T~ll~~A~ 476 (518)
| .+ ...++|+||.|++. |. .+..++++++.+|+|+-.+... -.| +.++
T Consensus 195 --l--------------~~-~~~~ADIvI~AvG~---p~----~i~~~~ik~gavVIDvGi~~~~~gkl~GDvd~-e~v~ 249 (284)
T PRK14190 195 --L--------------AE-LTKQADILIVAVGK---PK----LITADMVKEGAVVIDVGVNRLENGKLCGDVDF-DNVK 249 (284)
T ss_pred --H--------------HH-HHHhCCEEEEecCC---CC----cCCHHHcCCCCEEEEeeccccCCCCeeccCcH-HHHh
Confidence 1 11 23568999988853 22 3788899999999999877521 234 3333
Q ss_pred H-CCC--eeeccHH-----HHHHHHHHHHHHhcCC
Q 010101 477 E-VGA--TVVSGVE-----MFIRQALGQFRLFTGG 503 (518)
Q Consensus 477 ~-~G~--~~i~G~~-----ml~~Qa~~qf~lw~g~ 503 (518)
+ .++ ++-.|.+ ||+..-+.+++.|.|+
T Consensus 250 ~~a~~iTPVPGGVGpvT~a~L~~N~~~a~~~~~~~ 284 (284)
T PRK14190 250 EKASYITPVPGGVGPMTITMLMHNTVELAKRAGGR 284 (284)
T ss_pred hhceEecCCCCCChHHHHHHHHHHHHHHHHHhhcC
Confidence 3 332 2334544 8899888888877663
No 54
>PRK14191 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=98.08 E-value=0.00018 Score=72.05 Aligned_cols=200 Identities=17% Similarity=0.209 Sum_probs=119.9
Q ss_pred HHHHHHHcCCCceEEeccc----CcHHHHHHHh-cCCCCCEEEecccchHHH--HhcccccChhhhhcCceeEEEEeccC
Q 010101 256 HNPAFRHTRFNGIYVPMLV----DDVKEFFRTY-SGTDFAGFSVGIPHKEPA--VACCDEVHPLAKSIGAVNTIIRRPID 328 (518)
Q Consensus 256 hn~~f~~~gl~~~y~~~~~----~~l~~~~~~l-~~~~~~G~~VT~P~K~~v--~~~~d~~~~~A~~iGavNTi~~~~~~ 328 (518)
-.+..+++|++.....++- +++.+.++.+ .++.+.|+-|-.|+...+ ...++.++|. +-+-..+..- -
T Consensus 52 k~k~a~~~Gi~~~~~~l~~~~~~~el~~~I~~lN~D~~V~GIlvq~PlP~~i~~~~i~~~I~p~-KDVDGl~~~n----~ 126 (285)
T PRK14191 52 KIKACERVGMDSDLHTLQENTTEAELLSLIKDLNTDQNIDGILVQLPLPRHIDTKMVLEAIDPN-KDVDGFHPLN----I 126 (285)
T ss_pred HHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCCCCCCEEEEeCCCCCCCCHHHHHhcCCcc-ccccccChhh----H
Confidence 3467899999987666664 2577777777 477899999999975211 1111111111 1111111100 0
Q ss_pred CeE-EEee----cCHHHHHHHHHHHHHhhccCCCCCCCCcccCCcEEEEEccc-hhHHHHHHHHHHCCCeEEEEeCCHHH
Q 010101 329 GKL-VGYN----TDCESAISAIEDALRERQGINGVASHTSPIAGKIFVLVGAG-GAGRALAFGAKSRGARVIIFNRNYER 402 (518)
Q Consensus 329 g~l-~G~N----TD~~G~~~~l~~~l~~~~~~~~~~~~~~~l~~k~vlvlGaG-g~araia~~L~~~G~~v~i~nRt~~k 402 (518)
|++ .|.+ ---.|+++-|+. .+ .+++||+|+|+|.| -.|+.++.-|.+.|+.|+++.....
T Consensus 127 g~l~~g~~~~~PcTp~avi~lL~~-----~~--------i~l~Gk~vvVvGrs~~VG~Pla~lL~~~gAtVtv~hs~t~- 192 (285)
T PRK14191 127 GKLCSQLDGFVPATPMGVMRLLKH-----YH--------IEIKGKDVVIIGASNIVGKPLAMLMLNAGASVSVCHILTK- 192 (285)
T ss_pred HHHhcCCCCCCCCcHHHHHHHHHH-----hC--------CCCCCCEEEEECCCchhHHHHHHHHHHCCCEEEEEeCCcH-
Confidence 111 1111 224555555543 12 67899999999999 6999999999999999999864322
Q ss_pred HHHHHHHhcCcccccccccccCCCCccEEEEcCCCCCCCCCCCCCCChhhhcCCCEEEEEeeCCC-------chHHHHHH
Q 010101 403 AKALADAVSGEALHFEYLHEFFPEKGMILANASAIGMEPNSDQSPVPKEALKAYELVFDAVYTPR-------NTRLLREA 475 (518)
Q Consensus 403 a~~la~~~~~~~~~~~~l~~~~~~~~divInatp~g~~~~~~~~~~~~~~l~~~~~v~Di~Y~P~-------~T~ll~~A 475 (518)
.|.+ ...++|+||.|++. |. .+..++++++.+|+|+-.++. +-.+-...
T Consensus 193 --~l~~---------------~~~~ADIvV~AvG~---p~----~i~~~~vk~GavVIDvGi~~~~~gklvGDvd~e~v~ 248 (285)
T PRK14191 193 --DLSF---------------YTQNADIVCVGVGK---PD----LIKASMVKKGAVVVDIGINRLNDGRLVGDVDFENVA 248 (285)
T ss_pred --HHHH---------------HHHhCCEEEEecCC---CC----cCCHHHcCCCcEEEEeecccccCCceeccccHHHHh
Confidence 1211 23568999988842 22 377889999999999987652 23332222
Q ss_pred HHCCC-e-eeccH-----HHHHHHHHHHHH
Q 010101 476 AEVGA-T-VVSGV-----EMFIRQALGQFR 498 (518)
Q Consensus 476 ~~~G~-~-~i~G~-----~ml~~Qa~~qf~ 498 (518)
...++ . +-.|. -||+.+.+.+++
T Consensus 249 ~~a~~iTPVPGGVGpvT~a~L~~N~~~a~~ 278 (285)
T PRK14191 249 PKASFITPVPGGVGPMTIVSLLENTLIAAE 278 (285)
T ss_pred hhccEEecCCCCChHHHHHHHHHHHHHHHH
Confidence 22333 2 22344 377777766654
No 55
>PRK14188 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=98.08 E-value=2.3e-05 Score=79.11 Aligned_cols=157 Identities=15% Similarity=0.141 Sum_probs=103.5
Q ss_pred HHHHHHcCCCceEEeccc----CcHHHHHHHh-cCCCCCEEEecccchHHHHhcccccChhhhhcCceeEEEEeccCCeE
Q 010101 257 NPAFRHTRFNGIYVPMLV----DDVKEFFRTY-SGTDFAGFSVGIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKL 331 (518)
Q Consensus 257 n~~f~~~gl~~~y~~~~~----~~l~~~~~~l-~~~~~~G~~VT~P~K~~v~~~~d~~~~~A~~iGavNTi~~~~~~g~l 331 (518)
-+..+++|++..-..++- +++.+.++.+ .++++.|+.|-.|+-.. +| +. +. .|.|-..+ | .
T Consensus 54 ~k~a~~~Gi~~~~~~l~~~~~~~el~~~i~~lN~d~~V~GIlvq~Plp~~----~~---~~-~i---~~~I~p~K-D--V 119 (296)
T PRK14188 54 GKQTKEAGMASFEHKLPADTSQAELLALIARLNADPAIHGILVQLPLPKH----LD---SE-AV---IQAIDPEK-D--V 119 (296)
T ss_pred HHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCCCCCcEEEEeCCCCCC----CC---HH-HH---HhccCccc-c--c
Confidence 367889999976554442 3577777777 57789999999997522 11 11 11 12221110 0 1
Q ss_pred EEeecC----------------HHHHHHHHHHHHHhhccCCCCCCCCcccCCcEEEEEc-cchhHHHHHHHHHHCCCeEE
Q 010101 332 VGYNTD----------------CESAISAIEDALRERQGINGVASHTSPIAGKIFVLVG-AGGAGRALAFGAKSRGARVI 394 (518)
Q Consensus 332 ~G~NTD----------------~~G~~~~l~~~l~~~~~~~~~~~~~~~l~~k~vlvlG-aGg~araia~~L~~~G~~v~ 394 (518)
-|.+.. -.|++.-|+. .+ .+++||+|+|+| .|-+|+.++..|.+.|+.|+
T Consensus 120 DGl~~~n~g~l~~~~~~~~PcTp~ai~~ll~~-----~~--------i~~~Gk~V~viGrs~~mG~PmA~~L~~~g~tVt 186 (296)
T PRK14188 120 DGLHVVNAGRLATGETALVPCTPLGCMMLLRR-----VH--------GDLSGLNAVVIGRSNLVGKPMAQLLLAANATVT 186 (296)
T ss_pred ccCChhhHHHHhCCCCCCcCCCHHHHHHHHHH-----hC--------CCCCCCEEEEEcCCcchHHHHHHHHHhCCCEEE
Confidence 112111 5566665543 12 578999999999 78899999999999999999
Q ss_pred EE-eCCHHHHHHHHHHhcCcccccccccccCCCCccEEEEcCCCCCCCCCCCCCCChhhhcCCCEEEEEeeCC
Q 010101 395 IF-NRNYERAKALADAVSGEALHFEYLHEFFPEKGMILANASAIGMEPNSDQSPVPKEALKAYELVFDAVYTP 466 (518)
Q Consensus 395 i~-nRt~~ka~~la~~~~~~~~~~~~l~~~~~~~~divInatp~g~~~~~~~~~~~~~~l~~~~~v~Di~Y~P 466 (518)
++ +||.+- + + ...++|+||.+++-. . .+...+++++.+|+|+-.+.
T Consensus 187 v~~~rT~~l-~-----------------e-~~~~ADIVIsavg~~---~----~v~~~~lk~GavVIDvGin~ 233 (296)
T PRK14188 187 IAHSRTRDL-P-----------------A-VCRRADILVAAVGRP---E----MVKGDWIKPGATVIDVGINR 233 (296)
T ss_pred EECCCCCCH-H-----------------H-HHhcCCEEEEecCCh---h----hcchheecCCCEEEEcCCcc
Confidence 99 588531 1 1 224589999888632 1 35566789999999998765
No 56
>PF03435 Saccharop_dh: Saccharopine dehydrogenase ; InterPro: IPR005097 This entry represents saccharopine dehydrogenase and homospermidine synthase. Saccharopine reductase (SR) 1.5.1.10 from EC) catalyses the condensation of l-alpha-aminoadipate-delta-semialdehyde (AASA) with l-glutamate to give an imine, which is reduced by NADPH to give saccharopine []. In some organisms this enzyme is found as a bifunctional polypeptide with lysine ketoglutarate reductase (PF). Saccharopine dehydrogenase can also function as a saccharopine reductase. Homospermidine synthase proteins (2.5.1.44 from EC). Homospermidine synthase (HSS) catalyses the synthesis of the polyamine homospermidine from 2 mol putrescine in an NAD+-dependent reaction [].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2AXQ_A 1E5Q_A 1FF9_A 1E5L_A 2PH5_A 3IC5_A 3ABI_A.
Probab=98.07 E-value=1.8e-06 Score=91.00 Aligned_cols=123 Identities=29% Similarity=0.388 Sum_probs=84.1
Q ss_pred EEEEccchhHHHHHHHHHHCC-C-eEEEEeCCHHHHHHHHHHhcC---cc--cccc---cccccCCCCccEEEEcCCCCC
Q 010101 370 FVLVGAGGAGRALAFGAKSRG-A-RVIIFNRNYERAKALADAVSG---EA--LHFE---YLHEFFPEKGMILANASAIGM 439 (518)
Q Consensus 370 vlvlGaGg~araia~~L~~~G-~-~v~i~nRt~~ka~~la~~~~~---~~--~~~~---~l~~~~~~~~divInatp~g~ 439 (518)
|+|+|+|.+|++++..|.+.+ . +|++.+|+.++++++++.+.. .. ++.. ++.+ ...++|+||||.+.-.
T Consensus 1 IlvlG~G~vG~~~~~~L~~~~~~~~v~va~r~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~-~~~~~dvVin~~gp~~ 79 (386)
T PF03435_consen 1 ILVLGAGRVGSAIARLLARRGPFEEVTVADRNPEKAERLAEKLLGDRVEAVQVDVNDPESLAE-LLRGCDVVINCAGPFF 79 (386)
T ss_dssp EEEE--SHHHHHHHHHHHCTTCE-EEEEEESSHHHHHHHHT--TTTTEEEEE--TTTHHHHHH-HHTTSSEEEE-SSGGG
T ss_pred CEEEcCcHHHHHHHHHHhcCCCCCcEEEEECCHHHHHHHHhhccccceeEEEEecCCHHHHHH-HHhcCCEEEECCccch
Confidence 689999999999999999886 4 899999999999999876422 11 1222 2333 3567899999997531
Q ss_pred CCCCCCCCCChhhhcCCCEEEEEee-CCCchHHHHHHHHCCCeeeccHH-------HHHHHHHHHHH
Q 010101 440 EPNSDQSPVPKEALKAYELVFDAVY-TPRNTRLLREAAEVGATVVSGVE-------MFIRQALGQFR 498 (518)
Q Consensus 440 ~~~~~~~~~~~~~l~~~~~v~Di~Y-~P~~T~ll~~A~~~G~~~i~G~~-------ml~~Qa~~qf~ 498 (518)
..++-..++..+.-.+|..| .+....+-++|+++|..++.|.+ +++.+++.+|.
T Consensus 80 -----~~~v~~~~i~~g~~yvD~~~~~~~~~~l~~~a~~~g~~~l~~~G~~PGl~~~~a~~~~~~~~ 141 (386)
T PF03435_consen 80 -----GEPVARACIEAGVHYVDTSYVTEEMLALDEEAKEAGVTALPGCGFDPGLSNLLARYAADELD 141 (386)
T ss_dssp -----HHHHHHHHHHHT-EEEESS-HHHHHHHCHHHHHHTTSEEE-S-BTTTBHHHHHHHHHHHHHH
T ss_pred -----hHHHHHHHHHhCCCeeccchhHHHHHHHHHHHHhhCCEEEeCcccccchHHHHHHHHHHHhh
Confidence 11233456777778899766 44456677889999988876654 88999999988
No 57
>PF00670 AdoHcyase_NAD: S-adenosyl-L-homocysteine hydrolase, NAD binding domain; InterPro: IPR015878 S-adenosyl-L-homocysteine hydrolase (3.3.1.1 from EC) (AdoHcyase) is an enzyme of the activated methyl cycle, responsible for the reversible hydration of S-adenosyl-L-homocysteine into adenosine and homocysteine. AdoHcyase is an ubiquitous enzyme which binds and requires NAD+ as a cofactor. AdoHcyase is a highly conserved protein [] of about 430 to 470 amino acids. This entry represents the glycine-rich region in the central part of AdoHcyase, which is thought to be involved in NAD-binding.; GO: 0004013 adenosylhomocysteinase activity; PDB: 2ZJ1_C 3DHY_B 2ZIZ_C 2ZJ0_D 3CE6_B 3GLQ_B 3D64_A 3G1U_C 1A7A_A 3NJ4_C ....
Probab=98.05 E-value=5e-05 Score=69.57 Aligned_cols=97 Identities=23% Similarity=0.216 Sum_probs=63.5
Q ss_pred cccCCcEEEEEccchhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHhcCcccccccccccCCCCccEEEEcCCCCCCCC
Q 010101 363 SPIAGKIFVLVGAGGAGRALAFGAKSRGARVIIFNRNYERAKALADAVSGEALHFEYLHEFFPEKGMILANASAIGMEPN 442 (518)
Q Consensus 363 ~~l~~k~vlvlGaGg~araia~~L~~~G~~v~i~nRt~~ka~~la~~~~~~~~~~~~l~~~~~~~~divInatp~g~~~~ 442 (518)
..+.||+++|+|.|..||.+|..|..+|++|+|+.+++-++-+-+. -|.+..+++ + .+..+|++|.||... .
T Consensus 19 ~~l~Gk~vvV~GYG~vG~g~A~~lr~~Ga~V~V~e~DPi~alqA~~-dGf~v~~~~---~-a~~~adi~vtaTG~~--~- 90 (162)
T PF00670_consen 19 LMLAGKRVVVIGYGKVGKGIARALRGLGARVTVTEIDPIRALQAAM-DGFEVMTLE---E-ALRDADIFVTATGNK--D- 90 (162)
T ss_dssp S--TTSEEEEE--SHHHHHHHHHHHHTT-EEEEE-SSHHHHHHHHH-TT-EEE-HH---H-HTTT-SEEEE-SSSS--S-
T ss_pred eeeCCCEEEEeCCCcccHHHHHHHhhCCCEEEEEECChHHHHHhhh-cCcEecCHH---H-HHhhCCEEEECCCCc--c-
Confidence 5688999999999999999999999999999999999988654332 233333333 3 456789999998531 1
Q ss_pred CCCCCCCh---hhhcCCCEEEEEeeCCCchHH
Q 010101 443 SDQSPVPK---EALKAYELVFDAVYTPRNTRL 471 (518)
Q Consensus 443 ~~~~~~~~---~~l~~~~~v~Di~Y~P~~T~l 471 (518)
-+.. ..++++.++.++-..+.+-.+
T Consensus 91 ----vi~~e~~~~mkdgail~n~Gh~d~Eid~ 118 (162)
T PF00670_consen 91 ----VITGEHFRQMKDGAILANAGHFDVEIDV 118 (162)
T ss_dssp ----SB-HHHHHHS-TTEEEEESSSSTTSBTH
T ss_pred ----ccCHHHHHHhcCCeEEeccCcCceeEee
Confidence 1333 346788999988887777655
No 58
>PRK14182 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=98.05 E-value=0.00013 Score=72.91 Aligned_cols=197 Identities=18% Similarity=0.211 Sum_probs=125.2
Q ss_pred HHHHHHcCCCceEEeccc----CcHHHHHHHh-cCCCCCEEEecccchHHHHhcccccChhhhhcCceeEEEEeccCC--
Q 010101 257 NPAFRHTRFNGIYVPMLV----DDVKEFFRTY-SGTDFAGFSVGIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDG-- 329 (518)
Q Consensus 257 n~~f~~~gl~~~y~~~~~----~~l~~~~~~l-~~~~~~G~~VT~P~K~~v~~~~d~~~~~A~~iGavNTi~~~~~~g-- 329 (518)
.++.+++|++.....++- +++.+.++.+ .++++.|+.|-.|....+ | + -+.+.+++--. + -||
T Consensus 52 ~k~a~~~Gi~~~~~~l~~~~t~~~l~~~I~~lN~d~~V~GIivqlPLp~~i----~---~-~~i~~~I~p~K-D-VDGl~ 121 (282)
T PRK14182 52 RKDCEEVGITSVEHHLPATTTQAELLALIARLNADPAVHGILVQLPLPKHV----D---E-RAVLDAISPAK-D-ADGFH 121 (282)
T ss_pred HHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCCCCCCEEEEeCCCCCCC----C---H-HHHHhccCccc-C-cCCCC
Confidence 367899999988777753 3577777777 577899999999985321 1 1 11222222211 0 011
Q ss_pred -----eE-EEe-----ecCHHHHHHHHHHHHHhhccCCCCCCCCcccCCcEEEEEccch-hHHHHHHHHHHCCCeEEEEe
Q 010101 330 -----KL-VGY-----NTDCESAISAIEDALRERQGINGVASHTSPIAGKIFVLVGAGG-AGRALAFGAKSRGARVIIFN 397 (518)
Q Consensus 330 -----~l-~G~-----NTD~~G~~~~l~~~l~~~~~~~~~~~~~~~l~~k~vlvlGaGg-~araia~~L~~~G~~v~i~n 397 (518)
++ .|. -.--.|+++-|+. .+ .+++||+++|+|-+. .|+.++.-|.+.|+.|+++.
T Consensus 122 ~~n~g~l~~g~~~~~~PcTp~avi~ll~~-----~~--------i~l~Gk~vvViGrS~iVGkPla~lL~~~~AtVtich 188 (282)
T PRK14182 122 PFNVGALSIGIAGVPRPCTPAGVMRMLDE-----AR--------VDPKGKRALVVGRSNIVGKPMAMMLLERHATVTIAH 188 (282)
T ss_pred HhHHHHHhCCCCCCCCCCCHHHHHHHHHH-----hC--------CCCCCCEEEEECCCCcchHHHHHHHHHCCCEEEEeC
Confidence 11 111 1125666666553 12 678999999999986 99999999999999999987
Q ss_pred CCHHHHHHHHHHhcCcccccccccccCCCCccEEEEcCCCCCCCCCCCCCCChhhhcCCCEEEEEeeCCC-------chH
Q 010101 398 RNYERAKALADAVSGEALHFEYLHEFFPEKGMILANASAIGMEPNSDQSPVPKEALKAYELVFDAVYTPR-------NTR 470 (518)
Q Consensus 398 Rt~~ka~~la~~~~~~~~~~~~l~~~~~~~~divInatp~g~~~~~~~~~~~~~~l~~~~~v~Di~Y~P~-------~T~ 470 (518)
..... +.+ ...++|+||.|++. |. .+..++++++.+|+|+-.+.. +..
T Consensus 189 s~T~n-----------------l~~-~~~~ADIvI~AvGk---~~----~i~~~~ik~gaiVIDvGin~~~~gkl~GDVd 243 (282)
T PRK14182 189 SRTAD-----------------LAG-EVGRADILVAAIGK---AE----LVKGAWVKEGAVVIDVGMNRLADGKLVGDVE 243 (282)
T ss_pred CCCCC-----------------HHH-HHhhCCEEEEecCC---cC----ccCHHHcCCCCEEEEeeceecCCCCeeCCCC
Confidence 54221 112 23568999988853 32 478899999999999977652 233
Q ss_pred HHHHHHHCCC-e-eeccH-----HHHHHHHHHHHHHhc
Q 010101 471 LLREAAEVGA-T-VVSGV-----EMFIRQALGQFRLFT 501 (518)
Q Consensus 471 ll~~A~~~G~-~-~i~G~-----~ml~~Qa~~qf~lw~ 501 (518)
|-...+..++ . +-.|. -||+.+.+.+.+.|.
T Consensus 244 ~~~v~~~a~~iTPVPGGVGp~T~a~L~~N~~~~~~~~~ 281 (282)
T PRK14182 244 FAAAAARASAITPVPGGVGPMTRAMLLVNTVELAKRTA 281 (282)
T ss_pred HHHHHhhccEecCCCCCChHHHHHHHHHHHHHHHHHhc
Confidence 3222333343 2 33454 488888888777663
No 59
>PRK00676 hemA glutamyl-tRNA reductase; Validated
Probab=98.04 E-value=1.2e-05 Score=82.50 Aligned_cols=60 Identities=13% Similarity=0.211 Sum_probs=47.1
Q ss_pred ccCCcEEEEEccchhHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHHhcCccccccccc----ccCCCCccEEEEcCC
Q 010101 364 PIAGKIFVLVGAGGAGRALAFGAKSRGA-RVIIFNRNYERAKALADAVSGEALHFEYLH----EFFPEKGMILANASA 436 (518)
Q Consensus 364 ~l~~k~vlvlGaGg~araia~~L~~~G~-~v~i~nRt~~ka~~la~~~~~~~~~~~~l~----~~~~~~~divInatp 436 (518)
++.++++||||+|.||+.++.+|.+.|+ +|+|+|||.++ . +++++. + ...++|+||.||+
T Consensus 171 ~l~~k~vLvIGaGem~~l~a~~L~~~g~~~i~v~nRt~~~-~-----------~~~~~~~~~~~-~~~~~DvVIs~t~ 235 (338)
T PRK00676 171 KSKKASLLFIGYSEINRKVAYYLQRQGYSRITFCSRQQLT-L-----------PYRTVVREELS-FQDPYDVIFFGSS 235 (338)
T ss_pred CccCCEEEEEcccHHHHHHHHHHHHcCCCEEEEEcCCccc-c-----------chhhhhhhhhh-cccCCCEEEEcCC
Confidence 5789999999999999999999999998 89999999853 1 122111 1 2356899999854
No 60
>PRK14178 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=98.02 E-value=0.00033 Score=70.01 Aligned_cols=192 Identities=23% Similarity=0.290 Sum_probs=121.7
Q ss_pred HHHHHHcCCCceEEecccC----cHHHHHHHh-cCCCCCEEEecccchHHHHhcccccChhhhhcCceeEEEEeccCCeE
Q 010101 257 NPAFRHTRFNGIYVPMLVD----DVKEFFRTY-SGTDFAGFSVGIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKL 331 (518)
Q Consensus 257 n~~f~~~gl~~~y~~~~~~----~l~~~~~~l-~~~~~~G~~VT~P~K~~v~~~~d~~~~~A~~iGavNTi~~~~~~g~l 331 (518)
.+..+++|++.....++-+ ++.+.++.+ .++++.|+-|-.|.-..+ |+ . +.+.+++-- ++ -|| +
T Consensus 48 ~k~~~~~Gi~~~~~~l~~~~~~~el~~~I~~lN~D~~V~GIlvqlPLp~~i----~~---~-~v~~~I~p~-KD-VDG-l 116 (279)
T PRK14178 48 HRACERVGIGSVGIELPGDATTRTVLERIRRLNEDPDINGILVQLPLPKGV----DT---E-RVIAAILPE-KD-VDG-F 116 (279)
T ss_pred HHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCCCCCCeEEEcCCCCCCC----CH---H-HHHhccCcc-cC-ccc-C
Confidence 4678999999877777542 577777777 577899999999975322 11 0 111111111 00 011 2
Q ss_pred EEee-------------cCHHHHHHHHHHHHHhhccCCCCCCCCcccCCcEEEEEccc-hhHHHHHHHHHHCCCeEEEEe
Q 010101 332 VGYN-------------TDCESAISAIEDALRERQGINGVASHTSPIAGKIFVLVGAG-GAGRALAFGAKSRGARVIIFN 397 (518)
Q Consensus 332 ~G~N-------------TD~~G~~~~l~~~l~~~~~~~~~~~~~~~l~~k~vlvlGaG-g~araia~~L~~~G~~v~i~n 397 (518)
+-+| ---.|++.-|+. .+ .+++|++++|+|.+ -.||.++.-|...|+.|+++.
T Consensus 117 ~~~n~g~l~~~~~~~~PcTp~av~~ll~~-----~~--------i~l~Gk~V~ViGrs~~vGrpla~lL~~~~atVtv~h 183 (279)
T PRK14178 117 HPLNLGRLVSGLPGFAPCTPNGIMTLLHE-----YK--------ISIAGKRAVVVGRSIDVGRPMAALLLNADATVTICH 183 (279)
T ss_pred ChhhHHHHhCCCCCCCCCCHHHHHHHHHH-----cC--------CCCCCCEEEEECCCccccHHHHHHHHhCCCeeEEEe
Confidence 1111 124566665543 12 67899999999999 699999999999999999998
Q ss_pred CCHHHHHHHHHHhcCcccccccccccCCCCccEEEEcCCCCCCCCCCCCCCChhhhcCCCEEEEEeeCC------CchHH
Q 010101 398 RNYERAKALADAVSGEALHFEYLHEFFPEKGMILANASAIGMEPNSDQSPVPKEALKAYELVFDAVYTP------RNTRL 471 (518)
Q Consensus 398 Rt~~ka~~la~~~~~~~~~~~~l~~~~~~~~divInatp~g~~~~~~~~~~~~~~l~~~~~v~Di~Y~P------~~T~l 471 (518)
++....++ ...++|+||+|++. | ..+..++++++.+|+|+..+. ....|
T Consensus 184 s~t~~L~~------------------~~~~ADIvI~Avgk---~----~lv~~~~vk~GavVIDVgi~~~~gkl~GDvdf 238 (279)
T PRK14178 184 SKTENLKA------------------ELRQADILVSAAGK---A----GFITPDMVKPGATVIDVGINQVNGKLCGDVDF 238 (279)
T ss_pred cChhHHHH------------------HHhhCCEEEECCCc---c----cccCHHHcCCCcEEEEeeccccCCCCcCCccH
Confidence 76432211 23568999999952 1 137788899999999999874 23444
Q ss_pred HHHHHHC-CC-eee-ccH-----HHHHHHHHHHHH
Q 010101 472 LREAAEV-GA-TVV-SGV-----EMFIRQALGQFR 498 (518)
Q Consensus 472 l~~A~~~-G~-~~i-~G~-----~ml~~Qa~~qf~ 498 (518)
+.++++ ++ .-+ .|. .||+...+.+.+
T Consensus 239 -~~~~~~a~~iTPVPGGVGp~T~a~L~~N~~~a~~ 272 (279)
T PRK14178 239 -DAVKEIAGAITPVPGGVGPMTIATLMENTFDAAK 272 (279)
T ss_pred -HHHHhhccCcCCCCCCCHHHHHHHHHHHHHHHHH
Confidence 334333 32 222 343 377776665543
No 61
>PF03807 F420_oxidored: NADP oxidoreductase coenzyme F420-dependent; InterPro: IPR004455 The function of F420-dependent NADP reductase is the transfer of electrons from reduced coenzyme F420 into an electron transport chain. It catalyses the reduction of F420 with NADP(+) and the reduction of NADP(+) with F420H(2).; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2IZZ_B 2GR9_B 2GRA_B 2GER_C 2AMF_E 2AHR_C 2VQ3_B 2VNS_B 2RCY_D 2YJZ_D ....
Probab=98.01 E-value=3.6e-06 Score=70.35 Aligned_cols=88 Identities=30% Similarity=0.301 Sum_probs=62.3
Q ss_pred EEEEEccchhHHHHHHHHHHCC---CeEEEE-eCCHHHHHHHHHHhcCcccccccccccCCCCccEEEEcCCCCCCCCCC
Q 010101 369 IFVLVGAGGAGRALAFGAKSRG---ARVIIF-NRNYERAKALADAVSGEALHFEYLHEFFPEKGMILANASAIGMEPNSD 444 (518)
Q Consensus 369 ~vlvlGaGg~araia~~L~~~G---~~v~i~-nRt~~ka~~la~~~~~~~~~~~~l~~~~~~~~divInatp~g~~~~~~ 444 (518)
++.|||+|.+|.+++..|.+.| .+|+++ +|+++++++++++++......+ ..+ ...++|+||.|+++...+.
T Consensus 1 kI~iIG~G~mg~al~~~l~~~g~~~~~v~~~~~r~~~~~~~~~~~~~~~~~~~~-~~~-~~~~advvilav~p~~~~~-- 76 (96)
T PF03807_consen 1 KIGIIGAGNMGSALARGLLASGIKPHEVIIVSSRSPEKAAELAKEYGVQATADD-NEE-AAQEADVVILAVKPQQLPE-- 76 (96)
T ss_dssp EEEEESTSHHHHHHHHHHHHTTS-GGEEEEEEESSHHHHHHHHHHCTTEEESEE-HHH-HHHHTSEEEE-S-GGGHHH--
T ss_pred CEEEECCCHHHHHHHHHHHHCCCCceeEEeeccCcHHHHHHHHHhhccccccCC-hHH-hhccCCEEEEEECHHHHHH--
Confidence 5789999999999999999999 689965 9999999999999875432211 111 2346899999998654322
Q ss_pred CCCCChh--hhcCCCEEEEEe
Q 010101 445 QSPVPKE--ALKAYELVFDAV 463 (518)
Q Consensus 445 ~~~~~~~--~l~~~~~v~Di~ 463 (518)
+..+ .+.++.+++|+.
T Consensus 77 ---v~~~i~~~~~~~~vis~~ 94 (96)
T PF03807_consen 77 ---VLSEIPHLLKGKLVISIA 94 (96)
T ss_dssp ---HHHHHHHHHTTSEEEEES
T ss_pred ---HHHHHhhccCCCEEEEeC
Confidence 1111 245678888874
No 62
>PRK14180 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=98.01 E-value=9.1e-05 Score=74.06 Aligned_cols=198 Identities=17% Similarity=0.204 Sum_probs=120.6
Q ss_pred HHHHHcCCCceEEeccc----CcHHHHHHHh-cCCCCCEEEecccchHHH--HhcccccChhhhhcCceeEEEEeccCCe
Q 010101 258 PAFRHTRFNGIYVPMLV----DDVKEFFRTY-SGTDFAGFSVGIPHKEPA--VACCDEVHPLAKSIGAVNTIIRRPIDGK 330 (518)
Q Consensus 258 ~~f~~~gl~~~y~~~~~----~~l~~~~~~l-~~~~~~G~~VT~P~K~~v--~~~~d~~~~~A~~iGavNTi~~~~~~g~ 330 (518)
+.++++|++.....++- +++.+.++.+ .++...|+.|-.|+...+ ...++.++|. |-+-..+-. +-|+
T Consensus 54 k~~~~~Gi~~~~~~l~~~~~~~el~~~I~~lN~D~~V~GIivq~PlP~~i~~~~i~~~I~p~-KDVDGl~~~----n~g~ 128 (282)
T PRK14180 54 KACAQVGIDSQVITLPEHTTESELLELIDQLNNDSSVHAILVQLPLPAHINKNNVIYSIKPE-KDVDGFHPT----NVGR 128 (282)
T ss_pred HHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCCCCCCeEEEcCCCCCCCCHHHHHhhcCcc-ccccccChh----hHHH
Confidence 67899999987776654 3577777777 577899999999975322 1122111111 111111100 0011
Q ss_pred E-EEee-----cCHHHHHHHHHHHHHhhccCCCCCCCCcccCCcEEEEEccch-hHHHHHHHHHHCCCeEEEEeCCHHHH
Q 010101 331 L-VGYN-----TDCESAISAIEDALRERQGINGVASHTSPIAGKIFVLVGAGG-AGRALAFGAKSRGARVIIFNRNYERA 403 (518)
Q Consensus 331 l-~G~N-----TD~~G~~~~l~~~l~~~~~~~~~~~~~~~l~~k~vlvlGaGg-~araia~~L~~~G~~v~i~nRt~~ka 403 (518)
+ .|.+ ---.|++.-|+. .+ .+++||+++|+|-+. .|+.++.-|.+.|+.|+++.+....
T Consensus 129 l~~g~~~~~~PcTp~aii~lL~~-----y~--------i~l~Gk~vvViGrS~~VGkPla~lL~~~~ATVt~chs~T~d- 194 (282)
T PRK14180 129 LQLRDKKCLESCTPKGIMTMLRE-----YG--------IKTEGAYAVVVGASNVVGKPVSQLLLNAKATVTTCHRFTTD- 194 (282)
T ss_pred HhcCCCCCcCCCCHHHHHHHHHH-----hC--------CCCCCCEEEEECCCCcchHHHHHHHHHCCCEEEEEcCCCCC-
Confidence 1 2211 124566665543 12 678999999999986 9999999999999999999754221
Q ss_pred HHHHHHhcCcccccccccccCCCCccEEEEcCCCCCCCCCCCCCCChhhhcCCCEEEEEeeCCC------chHHHHHHHH
Q 010101 404 KALADAVSGEALHFEYLHEFFPEKGMILANASAIGMEPNSDQSPVPKEALKAYELVFDAVYTPR------NTRLLREAAE 477 (518)
Q Consensus 404 ~~la~~~~~~~~~~~~l~~~~~~~~divInatp~g~~~~~~~~~~~~~~l~~~~~v~Di~Y~P~------~T~ll~~A~~ 477 (518)
+.+ ...++|+||.|++. |. .+..++++++.+|+|+-.+.. +-.+-...+.
T Consensus 195 ----------------l~~-~~k~ADIvIsAvGk---p~----~i~~~~vk~gavVIDvGin~~~gkl~GDvd~~~v~~~ 250 (282)
T PRK14180 195 ----------------LKS-HTTKADILIVAVGK---PN----FITADMVKEGAVVIDVGINHVDGKIVGDVDFAAVKDK 250 (282)
T ss_pred ----------------HHH-HhhhcCEEEEccCC---cC----cCCHHHcCCCcEEEEecccccCCceeCCcCHHHHHhh
Confidence 111 23568999988753 22 377889999999999977652 2333222222
Q ss_pred CC-Ceeec-cHH-----HHHHHHHHHHH
Q 010101 478 VG-ATVVS-GVE-----MFIRQALGQFR 498 (518)
Q Consensus 478 ~G-~~~i~-G~~-----ml~~Qa~~qf~ 498 (518)
.+ +.-++ |.+ ||+...+.+.+
T Consensus 251 a~~iTPVPGGVGp~T~a~L~~Nl~~a~~ 278 (282)
T PRK14180 251 VAAITPVPGGVGPMTITELLYNTFQCAQ 278 (282)
T ss_pred ccEeccCCCChhHHHHHHHHHHHHHHHH
Confidence 33 33344 554 77777666544
No 63
>PRK14170 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=97.96 E-value=0.00028 Score=70.63 Aligned_cols=197 Identities=20% Similarity=0.260 Sum_probs=122.4
Q ss_pred HHHHHHHcCCCceEEeccc----CcHHHHHHHh-cCCCCCEEEecccchHHHHhcccccChhhhhcCceeEEEEeccCCe
Q 010101 256 HNPAFRHTRFNGIYVPMLV----DDVKEFFRTY-SGTDFAGFSVGIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGK 330 (518)
Q Consensus 256 hn~~f~~~gl~~~y~~~~~----~~l~~~~~~l-~~~~~~G~~VT~P~K~~v~~~~d~~~~~A~~iGavNTi~~~~~~g~ 330 (518)
-.+..+++|++.....++- +++.+.++.+ .++.+.|+.|-.|.-..+ | +. +.+.+++--. + -||
T Consensus 52 k~k~a~~~Gi~~~~~~l~~~~~~~el~~~I~~lN~D~~V~GIivqlPlP~~i----~---~~-~i~~~I~p~K-D-VDG- 120 (284)
T PRK14170 52 KQKRTEEAGMKSVLIELPENVTEEKLLSVVEELNEDKTIHGILVQLPLPEHI----S---EE-KVIDTISYDK-D-VDG- 120 (284)
T ss_pred HHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCCCCCCeEEEecCCCCCC----C---HH-HHHhccCccc-C-ccc-
Confidence 3367889999987666654 2566667766 577899999999975321 1 11 1112222111 0 011
Q ss_pred EEEee-------------cCHHHHHHHHHHHHHhhccCCCCCCCCcccCCcEEEEEccch-hHHHHHHHHHHCCCeEEEE
Q 010101 331 LVGYN-------------TDCESAISAIEDALRERQGINGVASHTSPIAGKIFVLVGAGG-AGRALAFGAKSRGARVIIF 396 (518)
Q Consensus 331 l~G~N-------------TD~~G~~~~l~~~l~~~~~~~~~~~~~~~l~~k~vlvlGaGg-~araia~~L~~~G~~v~i~ 396 (518)
++-+| ---.|++.-|+. .+ .+++||+++|+|-+. .||.++.-|.+.|+.|+++
T Consensus 121 l~p~N~g~l~~~~~~~~PcTp~avi~lL~~-----~~--------i~l~Gk~vvVvGrS~iVGkPla~lL~~~~atVtic 187 (284)
T PRK14170 121 FHPVNVGNLFIGKDSFVPCTPAGIIELIKS-----TG--------TQIEGKRAVVIGRSNIVGKPVAQLLLNENATVTIA 187 (284)
T ss_pred CChhhhhHHhCCCCCCCCCCHHHHHHHHHH-----hC--------CCCCCCEEEEECCCCcchHHHHHHHHHCCCEEEEe
Confidence 11111 115566666543 12 678999999999987 9999999999999999998
Q ss_pred eCCHHHHHHHHHHhcCcccccccccccCCCCccEEEEcCCCCCCCCCCCCCCChhhhcCCCEEEEEeeCCC-c------h
Q 010101 397 NRNYERAKALADAVSGEALHFEYLHEFFPEKGMILANASAIGMEPNSDQSPVPKEALKAYELVFDAVYTPR-N------T 469 (518)
Q Consensus 397 nRt~~ka~~la~~~~~~~~~~~~l~~~~~~~~divInatp~g~~~~~~~~~~~~~~l~~~~~v~Di~Y~P~-~------T 469 (518)
...... +.+ ...++||||.|++. |. .+..++++++.+|+|+-.+.. . -
T Consensus 188 hs~T~~-----------------l~~-~~~~ADIvI~AvG~---~~----~i~~~~vk~GavVIDvGin~~~~gkl~GDv 242 (284)
T PRK14170 188 HSRTKD-----------------LPQ-VAKEADILVVATGL---AK----FVKKDYIKPGAIVIDVGMDRDENNKLCGDV 242 (284)
T ss_pred CCCCCC-----------------HHH-HHhhCCEEEEecCC---cC----ccCHHHcCCCCEEEEccCcccCCCCeeccc
Confidence 653211 112 23568999988853 22 377889999999999987752 1 3
Q ss_pred HHHHHHHHCCC-e-eeccHH-----HHHHHHHHHHHHhc
Q 010101 470 RLLREAAEVGA-T-VVSGVE-----MFIRQALGQFRLFT 501 (518)
Q Consensus 470 ~ll~~A~~~G~-~-~i~G~~-----ml~~Qa~~qf~lw~ 501 (518)
.|-...+..++ . +=.|.+ ||+...+.+.+.+.
T Consensus 243 dfe~~~~~a~~iTPVPGGVGpvT~a~L~~N~~~a~~~~~ 281 (284)
T PRK14170 243 DFDDVVEEAGFITPVPGGVGPMTITMLLANTLKAAKRIW 281 (284)
T ss_pred chHHHHhhccEecCCCCChHHHHHHHHHHHHHHHHHHHh
Confidence 33222223333 2 334554 77777777665543
No 64
>PLN02897 tetrahydrofolate dehydrogenase/cyclohydrolase, putative
Probab=97.95 E-value=0.00029 Score=72.03 Aligned_cols=197 Identities=22% Similarity=0.265 Sum_probs=124.2
Q ss_pred HHHHHHcCCCceEEeccc----CcHHHHHHHh-cCCCCCEEEecccchHHHHhcccccChhhhhcCceeEEEEeccCC--
Q 010101 257 NPAFRHTRFNGIYVPMLV----DDVKEFFRTY-SGTDFAGFSVGIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDG-- 329 (518)
Q Consensus 257 n~~f~~~gl~~~y~~~~~----~~l~~~~~~l-~~~~~~G~~VT~P~K~~v~~~~d~~~~~A~~iGavNTi~~~~~~g-- 329 (518)
.++.+++|++..-..++- +++.+.++.+ .++++.|+-|-.|+... +| +. +.+.+++-- ++ -||
T Consensus 108 ~K~a~~~GI~~~~~~l~~~~te~ell~~I~~lN~D~~V~GIlVQlPLP~h----id---~~-~i~~~I~p~-KD-VDGl~ 177 (345)
T PLN02897 108 IKACEETGIKSLLAELPEDCTEGQILSALRKFNEDTSIHGILVQLPLPQH----LD---ES-KILNMVRLE-KD-VDGFH 177 (345)
T ss_pred HHHHHhcCCEEEEEECCCCCCHHHHHHHHHHHhCCCCCCEEEEeCCCCCC----CC---HH-HHHhccCcc-cC-ccCCC
Confidence 367889999877666654 2566777777 57789999999997522 21 11 122222211 11 011
Q ss_pred -----eE-EEee------cCHHHHHHHHHHHHHhhccCCCCCCCCcccCCcEEEEEccch-hHHHHHHHHHHCCCeEEEE
Q 010101 330 -----KL-VGYN------TDCESAISAIEDALRERQGINGVASHTSPIAGKIFVLVGAGG-AGRALAFGAKSRGARVIIF 396 (518)
Q Consensus 330 -----~l-~G~N------TD~~G~~~~l~~~l~~~~~~~~~~~~~~~l~~k~vlvlGaGg-~araia~~L~~~G~~v~i~ 396 (518)
++ .|.+ ---.|++.-|+. .+ .+++||+++|||-+. .|+.++.-|.+.|+.|+++
T Consensus 178 p~N~G~L~~~~~~~~~~PCTp~avi~LL~~-----~~--------i~l~GK~vvVIGRS~iVGkPla~LL~~~~ATVTic 244 (345)
T PLN02897 178 PLNVGNLAMRGREPLFVSCTPKGCVELLIR-----SG--------VEIAGKNAVVIGRSNIVGLPMSLLLQRHDATVSTV 244 (345)
T ss_pred HHHHHHHhcCCCCCCCcCCCHHHHHHHHHH-----hC--------CCCCCCEEEEECCCccccHHHHHHHHHCCCEEEEE
Confidence 12 1111 124566665543 12 678999999999986 9999999999999999998
Q ss_pred eCCHHHHHHHHHHhcCcccccccccccCCCCccEEEEcCCCCCCCCCCCCCCChhhhcCCCEEEEEeeCCCch-------
Q 010101 397 NRNYERAKALADAVSGEALHFEYLHEFFPEKGMILANASAIGMEPNSDQSPVPKEALKAYELVFDAVYTPRNT------- 469 (518)
Q Consensus 397 nRt~~ka~~la~~~~~~~~~~~~l~~~~~~~~divInatp~g~~~~~~~~~~~~~~l~~~~~v~Di~Y~P~~T------- 469 (518)
...... +.+ ...++||||.|++. |. .+..++++++.+|+|+-.++.+.
T Consensus 245 Hs~T~n-----------------l~~-~~~~ADIvIsAvGk---p~----~v~~d~vk~GavVIDVGin~~~~~~~~~g~ 299 (345)
T PLN02897 245 HAFTKD-----------------PEQ-ITRKADIVIAAAGI---PN----LVRGSWLKPGAVVIDVGTTPVEDSSCEFGY 299 (345)
T ss_pred cCCCCC-----------------HHH-HHhhCCEEEEccCC---cC----ccCHHHcCCCCEEEEccccccccccccCCC
Confidence 753221 111 23568999988853 22 37788999999999998776321
Q ss_pred ------HHHHHHHHCCC-e-eeccHH-----HHHHHHHHHHHHhc
Q 010101 470 ------RLLREAAEVGA-T-VVSGVE-----MFIRQALGQFRLFT 501 (518)
Q Consensus 470 ------~ll~~A~~~G~-~-~i~G~~-----ml~~Qa~~qf~lw~ 501 (518)
.|-...+..++ . +=.|.+ ||+...+.+.+.|.
T Consensus 300 klvGDVdfe~v~~~as~iTPVPGGVGpmTvamLm~N~~~a~~~~~ 344 (345)
T PLN02897 300 RLVGDVCYEEALGVASAITPVPGGVGPMTITMLLCNTLDAAKRIF 344 (345)
T ss_pred eeEecccHHHHHhhccccCCCCCchhHHHHHHHHHHHHHHHHHhc
Confidence 23222233343 2 334554 88888888877774
No 65
>PRK14168 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=97.93 E-value=0.00033 Score=70.57 Aligned_cols=203 Identities=20% Similarity=0.293 Sum_probs=124.3
Q ss_pred HHHHHHHcCCCceEEeccc----CcHHHHHHHh-cCCCCCEEEecccchHHH--HhcccccChhhhhcCceeEEEEeccC
Q 010101 256 HNPAFRHTRFNGIYVPMLV----DDVKEFFRTY-SGTDFAGFSVGIPHKEPA--VACCDEVHPLAKSIGAVNTIIRRPID 328 (518)
Q Consensus 256 hn~~f~~~gl~~~y~~~~~----~~l~~~~~~l-~~~~~~G~~VT~P~K~~v--~~~~d~~~~~A~~iGavNTi~~~~~~ 328 (518)
-.+..+++|++.....++- +++.+.++.+ .++++.|+.|-.|+-..+ -..++.++|. +-+-..+..- -
T Consensus 54 k~k~~~~~Gi~~~~~~l~~~~t~~el~~~I~~lN~D~~V~GIivqlPlP~~i~~~~i~~~I~p~-KDVDGl~~~n----~ 128 (297)
T PRK14168 54 KIKTAHRLGFHEIQDNQSVDITEEELLALIDKYNNDDSIHGILVQLPLPKHINEKKVLNAIDPD-KDVDGFHPVN----V 128 (297)
T ss_pred HHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCCCCCCEEEEeCCCCCCCCHHHHHhccCcc-ccccccChhh----H
Confidence 3467889999976555543 3577777777 577899999999964211 1111111111 1111111110 0
Q ss_pred CeE-EEee------cCHHHHHHHHHHHHHhhccCCCCCCCCcccCCcEEEEEccch-hHHHHHHHHHHC----CCeEEEE
Q 010101 329 GKL-VGYN------TDCESAISAIEDALRERQGINGVASHTSPIAGKIFVLVGAGG-AGRALAFGAKSR----GARVIIF 396 (518)
Q Consensus 329 g~l-~G~N------TD~~G~~~~l~~~l~~~~~~~~~~~~~~~l~~k~vlvlGaGg-~araia~~L~~~----G~~v~i~ 396 (518)
|++ .|.+ ---.|+++-|+. .+ .+++||+++|+|.+. .|+.++.-|.+. ++.|+++
T Consensus 129 g~l~~~~~~~~~~PcTp~avi~lL~~-----~~--------i~l~Gk~vvViGrS~iVGkPla~lL~~~~~~~~atVtv~ 195 (297)
T PRK14168 129 GRLMIGGDEVKFLPCTPAGIQEMLVR-----SG--------VETSGAEVVVVGRSNIVGKPIANMMTQKGPGANATVTIV 195 (297)
T ss_pred HHHhcCCCCCCCcCCCHHHHHHHHHH-----hC--------CCCCCCEEEEECCCCcccHHHHHHHHhcccCCCCEEEEe
Confidence 111 1111 115566666543 12 678999999999986 999999999988 6799998
Q ss_pred eCCHHHHHHHHHHhcCcccccccccccCCCCccEEEEcCCCCCCCCCCCCCCChhhhcCCCEEEEEeeCCC---------
Q 010101 397 NRNYERAKALADAVSGEALHFEYLHEFFPEKGMILANASAIGMEPNSDQSPVPKEALKAYELVFDAVYTPR--------- 467 (518)
Q Consensus 397 nRt~~ka~~la~~~~~~~~~~~~l~~~~~~~~divInatp~g~~~~~~~~~~~~~~l~~~~~v~Di~Y~P~--------- 467 (518)
.+... ++.+ ...++|+||.|++. |. .+..++++++.+|+|+-.+..
T Consensus 196 hs~T~-----------------~l~~-~~~~ADIvVsAvGk---p~----~i~~~~ik~gavVIDvGin~~~~~~~~g~~ 250 (297)
T PRK14168 196 HTRSK-----------------NLAR-HCQRADILIVAAGV---PN----LVKPEWIKPGATVIDVGVNRVGTNESTGKA 250 (297)
T ss_pred cCCCc-----------------CHHH-HHhhCCEEEEecCC---cC----ccCHHHcCCCCEEEecCCCccCccccCCCc
Confidence 64321 1111 23568999988853 22 378899999999999965531
Q ss_pred ----chHHHHHHHH-CCC--eeeccHH-----HHHHHHHHHHHHhcC
Q 010101 468 ----NTRLLREAAE-VGA--TVVSGVE-----MFIRQALGQFRLFTG 502 (518)
Q Consensus 468 ----~T~ll~~A~~-~G~--~~i~G~~-----ml~~Qa~~qf~lw~g 502 (518)
+-.| +.+++ .++ ++=.|.+ ||++..+.+.+.|.|
T Consensus 251 ~~~GDVdf-e~v~~~a~~iTPVPGGVGp~T~a~L~~N~~~a~~~~~~ 296 (297)
T PRK14168 251 ILSGDVDF-DAVKEIAGKITPVPGGVGPMTIAMLMRNTLKSAKFHLS 296 (297)
T ss_pred ceeccccH-HHHHhhccEecCCCCCchHHHHHHHHHHHHHHHHHHhC
Confidence 1223 33333 332 2334544 999999999999987
No 66
>PF03446 NAD_binding_2: NAD binding domain of 6-phosphogluconate dehydrogenase; InterPro: IPR006115 6-Phosphogluconate dehydrogenase (1.1.1.44 from EC) (6PGD) is an oxidative carboxylase that catalyses the decarboxylating reduction of 6-phosphogluconate into ribulose 5-phosphate in the presence of NADP. This reaction is a component of the hexose mono-phosphate shunt and pentose phosphate pathways (PPP) [, ]. Prokaryotic and eukaryotic 6PGD are proteins of about 470 amino acids whose sequence are highly conserved []. The protein is a homodimer in which the monomers act independently []: each contains a large, mainly alpha-helical domain and a smaller beta-alpha-beta domain, containing a mixed parallel and anti-parallel 6-stranded beta sheet []. NADP is bound in a cleft in the small domain, the substrate binding in an adjacent pocket []. This family represents the NADP binding domain of 6-phosphogluconate dehydrogenase which adopts a Rossman fold. The C-terminal domain is described in IPR006114 from INTERPRO.; GO: 0004616 phosphogluconate dehydrogenase (decarboxylating) activity, 0006098 pentose-phosphate shunt, 0055114 oxidation-reduction process; PDB: 3AX6_D 3PDU_G 3Q3C_A 3OBB_A 4DLL_B 1PGP_A 1PGN_A 2PGD_A 1PGQ_A 1PGO_A ....
Probab=97.93 E-value=6.7e-06 Score=76.07 Aligned_cols=111 Identities=21% Similarity=0.232 Sum_probs=69.3
Q ss_pred cEEEEEccchhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHhcCcccccccccccCCCCccEEEEcCCCCCCCCCCCCC
Q 010101 368 KIFVLVGAGGAGRALAFGAKSRGARVIIFNRNYERAKALADAVSGEALHFEYLHEFFPEKGMILANASAIGMEPNSDQSP 447 (518)
Q Consensus 368 k~vlvlGaGg~araia~~L~~~G~~v~i~nRt~~ka~~la~~~~~~~~~~~~l~~~~~~~~divInatp~g~~~~~~~~~ 447 (518)
+++.+||.|-||++++..|.+.|++|+++||++++++++.+.-....-+..++ ..++|+|+.+.|-+-. .....
T Consensus 2 ~~Ig~IGlG~mG~~~a~~L~~~g~~v~~~d~~~~~~~~~~~~g~~~~~s~~e~----~~~~dvvi~~v~~~~~--v~~v~ 75 (163)
T PF03446_consen 2 MKIGFIGLGNMGSAMARNLAKAGYEVTVYDRSPEKAEALAEAGAEVADSPAEA----AEQADVVILCVPDDDA--VEAVL 75 (163)
T ss_dssp BEEEEE--SHHHHHHHHHHHHTTTEEEEEESSHHHHHHHHHTTEEEESSHHHH----HHHBSEEEE-SSSHHH--HHHHH
T ss_pred CEEEEEchHHHHHHHHHHHHhcCCeEEeeccchhhhhhhHHhhhhhhhhhhhH----hhcccceEeecccchh--hhhhh
Confidence 47899999999999999999999999999999999999987631111223332 3457999988874311 00000
Q ss_pred CC---hhhhcCCCEEEEEeeC-CCch-HHHHHHHHCCCeeec
Q 010101 448 VP---KEALKAYELVFDAVYT-PRNT-RLLREAAEVGATVVS 484 (518)
Q Consensus 448 ~~---~~~l~~~~~v~Di~Y~-P~~T-~ll~~A~~~G~~~i~ 484 (518)
.. ...+.++.+++|+... |..+ .+.+.++++|+.+++
T Consensus 76 ~~~~i~~~l~~g~iiid~sT~~p~~~~~~~~~~~~~g~~~vd 117 (163)
T PF03446_consen 76 FGENILAGLRPGKIIIDMSTISPETSRELAERLAAKGVRYVD 117 (163)
T ss_dssp HCTTHGGGS-TTEEEEE-SS--HHHHHHHHHHHHHTTEEEEE
T ss_pred hhhHHhhccccceEEEecCCcchhhhhhhhhhhhhccceeee
Confidence 11 1235678899999886 4433 333444667876543
No 67
>COG2084 MmsB 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases [Lipid metabolism]
Probab=97.91 E-value=1.3e-05 Score=80.32 Aligned_cols=109 Identities=19% Similarity=0.217 Sum_probs=76.4
Q ss_pred EEEEEccchhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHhcCccc-ccccccccCCCCccEEEEcCCCCCCCCCCCCC
Q 010101 369 IFVLVGAGGAGRALAFGAKSRGARVIIFNRNYERAKALADAVSGEAL-HFEYLHEFFPEKGMILANASAIGMEPNSDQSP 447 (518)
Q Consensus 369 ~vlvlGaGg~araia~~L~~~G~~v~i~nRt~~ka~~la~~~~~~~~-~~~~l~~~~~~~~divInatp~g~~~~~~~~~ 447 (518)
++.+||.|-||..++..|.+.|+.++++||+++++.+++...|.... +..+ ....+|+||.+.|-+ +......
T Consensus 2 kIafIGLG~MG~pmA~~L~~aG~~v~v~~r~~~ka~~~~~~~Ga~~a~s~~e----aa~~aDvVitmv~~~--~~V~~V~ 75 (286)
T COG2084 2 KIAFIGLGIMGSPMAANLLKAGHEVTVYNRTPEKAAELLAAAGATVAASPAE----AAAEADVVITMLPDD--AAVRAVL 75 (286)
T ss_pred eEEEEcCchhhHHHHHHHHHCCCEEEEEeCChhhhhHHHHHcCCcccCCHHH----HHHhCCEEEEecCCH--HHHHHHH
Confidence 68899999999999999999999999999999998888777665432 2222 345689999776532 1111111
Q ss_pred CCh----hhhcCCCEEEEEeeC-CCch-HHHHHHHHCCCeee
Q 010101 448 VPK----EALKAYELVFDAVYT-PRNT-RLLREAAEVGATVV 483 (518)
Q Consensus 448 ~~~----~~l~~~~~v~Di~Y~-P~~T-~ll~~A~~~G~~~i 483 (518)
+.+ +.++++.+++|+... |..+ .+.+.++++|+..+
T Consensus 76 ~g~~g~~~~~~~G~i~IDmSTisp~~a~~~a~~~~~~G~~~l 117 (286)
T COG2084 76 FGENGLLEGLKPGAIVIDMSTISPETARELAAALAAKGLEFL 117 (286)
T ss_pred hCccchhhcCCCCCEEEECCCCCHHHHHHHHHHHHhcCCcEE
Confidence 221 234678999999887 5443 44455677777654
No 68
>PRK14172 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=97.91 E-value=0.00018 Score=71.81 Aligned_cols=161 Identities=20% Similarity=0.207 Sum_probs=105.5
Q ss_pred HHHHHHcCCCceEEeccc----CcHHHHHHHh-cCCCCCEEEecccchHHHHhcccccChhhhhcCceeEEEEeccCCeE
Q 010101 257 NPAFRHTRFNGIYVPMLV----DDVKEFFRTY-SGTDFAGFSVGIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKL 331 (518)
Q Consensus 257 n~~f~~~gl~~~y~~~~~----~~l~~~~~~l-~~~~~~G~~VT~P~K~~v~~~~d~~~~~A~~iGavNTi~~~~~~g~l 331 (518)
.+..+++|++.....++- +++.+.++.+ .+.++.|+.|-+|+... +| + -+.+.+++--. + -|| +
T Consensus 54 ~k~a~~~Gi~~~~~~l~~~~~~~el~~~I~~lN~d~~V~GIlvqlPLP~~----~~---~-~~i~~~I~p~K-D-VDG-l 122 (278)
T PRK14172 54 EKVANSLGIDFKKIKLDESISEEDLINEIEELNKDNNVHGIMLQLPLPKH----LD---E-KKITNKIDANK-D-IDC-L 122 (278)
T ss_pred HHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCCCCCCeEEEcCCCCCC----CC---H-HHHHhccCccc-c-cCc-c
Confidence 377899999988777763 3566667767 47789999999997522 21 1 11222222211 1 011 1
Q ss_pred EEee-------------cCHHHHHHHHHHHHHhhccCCCCCCCCcccCCcEEEEEccch-hHHHHHHHHHHCCCeEEEEe
Q 010101 332 VGYN-------------TDCESAISAIEDALRERQGINGVASHTSPIAGKIFVLVGAGG-AGRALAFGAKSRGARVIIFN 397 (518)
Q Consensus 332 ~G~N-------------TD~~G~~~~l~~~l~~~~~~~~~~~~~~~l~~k~vlvlGaGg-~araia~~L~~~G~~v~i~n 397 (518)
+=+| ---.|+++-|+. .+ .+++||+++|+|-+. .|+.++.-|.+.|+.|+++.
T Consensus 123 ~~~n~g~l~~g~~~~~PcTp~av~~lL~~-----~~--------i~l~Gk~vvViGrS~~VGkPla~lL~~~~AtVt~ch 189 (278)
T PRK14172 123 TFISVGKFYKGEKCFLPCTPNSVITLIKS-----LN--------IDIEGKEVVVIGRSNIVGKPVAQLLLNENATVTICH 189 (278)
T ss_pred CHhhHHHHhCCCCCCcCCCHHHHHHHHHH-----hC--------CCCCCCEEEEECCCccchHHHHHHHHHCCCEEEEeC
Confidence 1111 123455555543 12 678999999999986 99999999999999999997
Q ss_pred CCHHHHHHHHHHhcCcccccccccccCCCCccEEEEcCCCCCCCCCCCCCCChhhhcCCCEEEEEeeCC
Q 010101 398 RNYERAKALADAVSGEALHFEYLHEFFPEKGMILANASAIGMEPNSDQSPVPKEALKAYELVFDAVYTP 466 (518)
Q Consensus 398 Rt~~ka~~la~~~~~~~~~~~~l~~~~~~~~divInatp~g~~~~~~~~~~~~~~l~~~~~v~Di~Y~P 466 (518)
..... +.+ ...++|+||.|++. |. .+..++++++.+|+|+-.++
T Consensus 190 s~T~~-----------------l~~-~~~~ADIvIsAvGk---p~----~i~~~~ik~gavVIDvGin~ 233 (278)
T PRK14172 190 SKTKN-----------------LKE-VCKKADILVVAIGR---PK----FIDEEYVKEGAIVIDVGTSS 233 (278)
T ss_pred CCCCC-----------------HHH-HHhhCCEEEEcCCC---cC----ccCHHHcCCCcEEEEeeccc
Confidence 53221 111 23568999988753 22 37788999999999996655
No 69
>PRK14186 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=97.90 E-value=0.00048 Score=69.47 Aligned_cols=202 Identities=19% Similarity=0.224 Sum_probs=122.4
Q ss_pred HHHHHHHcCCCceEEeccc----CcHHHHHHHh-cCCCCCEEEecccchHHH--HhcccccChhhhhcCceeEEEEeccC
Q 010101 256 HNPAFRHTRFNGIYVPMLV----DDVKEFFRTY-SGTDFAGFSVGIPHKEPA--VACCDEVHPLAKSIGAVNTIIRRPID 328 (518)
Q Consensus 256 hn~~f~~~gl~~~y~~~~~----~~l~~~~~~l-~~~~~~G~~VT~P~K~~v--~~~~d~~~~~A~~iGavNTi~~~~~~ 328 (518)
--+..+++|++..-..++- +++.+.++.+ .+++..|+.|-.|+-..+ ...++.+++. +-+-..+..- -
T Consensus 53 k~k~a~~~Gi~~~~~~l~~~~~~~el~~~I~~lN~D~~V~GIivq~PLP~~i~~~~i~~~I~p~-KDVDGl~~~n----~ 127 (297)
T PRK14186 53 KEKACARVGIASFGKHLPADTSQAEVEALIAQLNQDERVDGILLQLPLPKHLDEVPLLHAIDPD-KDADGLHPLN----L 127 (297)
T ss_pred HHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCCCCCCEEEEeCCCCCCCCHHHHHhccCcc-cCcccCChhh----H
Confidence 3467889999987555543 3577777777 567899999999975322 1112111111 1111111100 0
Q ss_pred CeE-EEe----ecCHHHHHHHHHHHHHhhccCCCCCCCCcccCCcEEEEEccch-hHHHHHHHHHHCCCeEEEEeCCHHH
Q 010101 329 GKL-VGY----NTDCESAISAIEDALRERQGINGVASHTSPIAGKIFVLVGAGG-AGRALAFGAKSRGARVIIFNRNYER 402 (518)
Q Consensus 329 g~l-~G~----NTD~~G~~~~l~~~l~~~~~~~~~~~~~~~l~~k~vlvlGaGg-~araia~~L~~~G~~v~i~nRt~~k 402 (518)
|++ .|. ----.|++.-|+. .+ .+++||+++|+|-+. .|+.++.-|.+.|+.|+++......
T Consensus 128 g~l~~~~~~~~PcTp~aii~lL~~-----~~--------i~l~Gk~vvVIGrS~iVGkPla~lL~~~~atVtv~hs~T~~ 194 (297)
T PRK14186 128 GRLVKGEPGLRSCTPAGVMRLLRS-----QQ--------IDIAGKKAVVVGRSILVGKPLALMLLAANATVTIAHSRTQD 194 (297)
T ss_pred HHHhCCCCCCCCCCHHHHHHHHHH-----hC--------CCCCCCEEEEECCCccchHHHHHHHHHCCCEEEEeCCCCCC
Confidence 111 111 1125666666553 12 678999999999986 9999999999999999998643221
Q ss_pred HHHHHHHhcCcccccccccccCCCCccEEEEcCCCCCCCCCCCCCCChhhhcCCCEEEEEeeCCCc-----------hHH
Q 010101 403 AKALADAVSGEALHFEYLHEFFPEKGMILANASAIGMEPNSDQSPVPKEALKAYELVFDAVYTPRN-----------TRL 471 (518)
Q Consensus 403 a~~la~~~~~~~~~~~~l~~~~~~~~divInatp~g~~~~~~~~~~~~~~l~~~~~v~Di~Y~P~~-----------T~l 471 (518)
+.+ ...++||||.|++. |+ .+..++++++.+|+|+-.++.. -.|
T Consensus 195 -----------------l~~-~~~~ADIvIsAvGk---p~----~i~~~~ik~gavVIDvGin~~~~~~~~gkl~GDvd~ 249 (297)
T PRK14186 195 -----------------LAS-ITREADILVAAAGR---PN----LIGAEMVKPGAVVVDVGIHRLPSSDGKTRLCGDVDF 249 (297)
T ss_pred -----------------HHH-HHhhCCEEEEccCC---cC----ccCHHHcCCCCEEEEeccccccccccCCceeCCccH
Confidence 111 23568999988753 22 3778899999999999877531 223
Q ss_pred HHHHHHCCC--eeeccHH-----HHHHHHHHHHHHh
Q 010101 472 LREAAEVGA--TVVSGVE-----MFIRQALGQFRLF 500 (518)
Q Consensus 472 l~~A~~~G~--~~i~G~~-----ml~~Qa~~qf~lw 500 (518)
-...+..++ ++=.|.+ ||+.+.+.+++.-
T Consensus 250 ~~v~~~a~~iTPVPGGVGp~T~a~L~~Nl~~a~~~~ 285 (297)
T PRK14186 250 EEVEPVAAAITPVPGGVGPMTVTMLLVNTVLSWQKR 285 (297)
T ss_pred HHHHhhceEecCCCCCchHHHHHHHHHHHHHHHHHh
Confidence 122222332 2334544 8888877776553
No 70
>PRK14177 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=97.90 E-value=0.00016 Score=72.40 Aligned_cols=200 Identities=18% Similarity=0.267 Sum_probs=121.2
Q ss_pred HHHHHHHcCCCceEEeccc----CcHHHHHHHh-cCCCCCEEEecccchHHH--HhcccccChhhhhcCceeEEEEeccC
Q 010101 256 HNPAFRHTRFNGIYVPMLV----DDVKEFFRTY-SGTDFAGFSVGIPHKEPA--VACCDEVHPLAKSIGAVNTIIRRPID 328 (518)
Q Consensus 256 hn~~f~~~gl~~~y~~~~~----~~l~~~~~~l-~~~~~~G~~VT~P~K~~v--~~~~d~~~~~A~~iGavNTi~~~~~~ 328 (518)
-.+.++++|++.....++- +++.+.++.+ .+.++.|+.|-+|+...+ ...++.++|. +-+-..+..- -
T Consensus 54 k~k~~~~~Gi~~~~~~l~~~~s~~el~~~I~~lN~D~~V~GIlvqlPLp~~i~~~~i~~~I~p~-KDVDGl~~~n----~ 128 (284)
T PRK14177 54 KVKACHKVGMGSEMIRLKEQTTTEELLGVIDKLNLDPNVDGILLQHPVPSQIDERAAFDRIALE-KDVDGVTTLS----F 128 (284)
T ss_pred HHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCCCCCCeEEEcCCCCCCCCHHHHHhccCcc-cccccCChhh----H
Confidence 3478899999988776653 3566677777 467899999999975321 1111111111 1111111100 0
Q ss_pred CeE-EEee----cCHHHHHHHHHHHHHhhccCCCCCCCCcccCCcEEEEEccch-hHHHHHHHHHHCCCeEEEEeCCHHH
Q 010101 329 GKL-VGYN----TDCESAISAIEDALRERQGINGVASHTSPIAGKIFVLVGAGG-AGRALAFGAKSRGARVIIFNRNYER 402 (518)
Q Consensus 329 g~l-~G~N----TD~~G~~~~l~~~l~~~~~~~~~~~~~~~l~~k~vlvlGaGg-~araia~~L~~~G~~v~i~nRt~~k 402 (518)
|++ .|.. .--.|+++-|+. .+ .+++||+++|+|-+. .|+.++.-|.+.|+.|++++..-..
T Consensus 129 g~l~~g~~~~~PcTp~avi~ll~~-----y~--------i~l~Gk~vvViGrS~iVGkPla~lL~~~~atVt~chs~T~~ 195 (284)
T PRK14177 129 GKLSMGVETYLPCTPYGMVLLLKE-----YG--------IDVTGKNAVVVGRSPILGKPMAMLLTEMNATVTLCHSKTQN 195 (284)
T ss_pred HHHHcCCCCCCCCCHHHHHHHHHH-----hC--------CCCCCCEEEEECCCCcchHHHHHHHHHCCCEEEEeCCCCCC
Confidence 111 1111 124566665543 12 678999999999986 9999999999999999998843221
Q ss_pred HHHHHHHhcCcccccccccccCCCCccEEEEcCCCCCCCCCCCCCCChhhhcCCCEEEEEeeCCC---chHHHHHHHHCC
Q 010101 403 AKALADAVSGEALHFEYLHEFFPEKGMILANASAIGMEPNSDQSPVPKEALKAYELVFDAVYTPR---NTRLLREAAEVG 479 (518)
Q Consensus 403 a~~la~~~~~~~~~~~~l~~~~~~~~divInatp~g~~~~~~~~~~~~~~l~~~~~v~Di~Y~P~---~T~ll~~A~~~G 479 (518)
+.+ ...++|+||.|++. |. .+..++++++.+|+|+-.+.. +-.|-......+
T Consensus 196 -----------------l~~-~~~~ADIvIsAvGk---~~----~i~~~~ik~gavVIDvGin~~~~GDVd~~~v~~~a~ 250 (284)
T PRK14177 196 -----------------LPS-IVRQADIIVGAVGK---PE----FIKADWISEGAVLLDAGYNPGNVGDIEISKAKDKSS 250 (284)
T ss_pred -----------------HHH-HHhhCCEEEEeCCC---cC----ccCHHHcCCCCEEEEecCcccccCCcCHHHHhhhcc
Confidence 111 23568999987753 22 377889999999999987643 233322222233
Q ss_pred C--eeeccHH-----HHHHHHHHHHH
Q 010101 480 A--TVVSGVE-----MFIRQALGQFR 498 (518)
Q Consensus 480 ~--~~i~G~~-----ml~~Qa~~qf~ 498 (518)
+ ++=.|.+ ||+.+.+..++
T Consensus 251 ~iTPVPGGVGp~T~a~L~~N~~~a~~ 276 (284)
T PRK14177 251 FYTPVPGGVGPMTIAVLLLQTLYSFK 276 (284)
T ss_pred EecCCCCCChHHHHHHHHHHHHHHHH
Confidence 2 2334555 78888776653
No 71
>PRK14171 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=97.90 E-value=0.00022 Score=71.52 Aligned_cols=162 Identities=19% Similarity=0.258 Sum_probs=105.9
Q ss_pred HHHHHHHcCCCceEEeccc----CcHHHHHHHh-cCCCCCEEEecccchHHHHhcccccChhhhhcCceeEEEEeccCCe
Q 010101 256 HNPAFRHTRFNGIYVPMLV----DDVKEFFRTY-SGTDFAGFSVGIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGK 330 (518)
Q Consensus 256 hn~~f~~~gl~~~y~~~~~----~~l~~~~~~l-~~~~~~G~~VT~P~K~~v~~~~d~~~~~A~~iGavNTi~~~~~~g~ 330 (518)
--+.++++|++.....++- +++.+.++.+ .++++.|+.|-+|+... +| + -+.+.+++--. + -||
T Consensus 53 k~k~a~~~Gi~~~~~~l~~~~~~~~l~~~I~~LN~D~~V~GIlvqlPLP~~----id---~-~~i~~~I~p~K-D-VDG- 121 (288)
T PRK14171 53 KIKNAHKIGIDTLLVNLSTTIHTNDLISKINELNLDNEISGIIVQLPLPSS----ID---K-NKILSAVSPSK-D-IDG- 121 (288)
T ss_pred HHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHcCCCCCCEEEEeCCCCCC----CC---H-HHHHhccCccc-c-ccc-
Confidence 3467899999987777753 3566666666 46789999999997532 11 1 11222222211 0 011
Q ss_pred EEEee--------------cCHHHHHHHHHHHHHhhccCCCCCCCCcccCCcEEEEEccch-hHHHHHHHHHHCCCeEEE
Q 010101 331 LVGYN--------------TDCESAISAIEDALRERQGINGVASHTSPIAGKIFVLVGAGG-AGRALAFGAKSRGARVII 395 (518)
Q Consensus 331 l~G~N--------------TD~~G~~~~l~~~l~~~~~~~~~~~~~~~l~~k~vlvlGaGg-~araia~~L~~~G~~v~i 395 (518)
++-+| ---.|++.-|+. .+ .+++||+++|+|-+. .|+.++.-|.+.|+.|++
T Consensus 122 l~~~N~g~l~~g~~~~~~PcTp~av~~lL~~-----y~--------i~l~GK~vvViGrS~iVGkPla~lL~~~~ATVti 188 (288)
T PRK14171 122 FHPLNVGYLHSGISQGFIPCTALGCLAVIKK-----YE--------PNLTGKNVVIIGRSNIVGKPLSALLLKENCSVTI 188 (288)
T ss_pred CCccchhhhhcCCCCCCcCCCHHHHHHHHHH-----hC--------CCCCCCEEEEECCCCcchHHHHHHHHHCCCEEEE
Confidence 22222 114556665543 12 678999999999986 999999999999999999
Q ss_pred EeCCHHHHHHHHHHhcCcccccccccccCCCCccEEEEcCCCCCCCCCCCCCCChhhhcCCCEEEEEeeCC
Q 010101 396 FNRNYERAKALADAVSGEALHFEYLHEFFPEKGMILANASAIGMEPNSDQSPVPKEALKAYELVFDAVYTP 466 (518)
Q Consensus 396 ~nRt~~ka~~la~~~~~~~~~~~~l~~~~~~~~divInatp~g~~~~~~~~~~~~~~l~~~~~v~Di~Y~P 466 (518)
++..-.. +.+ ...++||||.|++. |. .+..++++++.+|+|+-.+.
T Consensus 189 chs~T~~-----------------L~~-~~~~ADIvV~AvGk---p~----~i~~~~vk~GavVIDvGin~ 234 (288)
T PRK14171 189 CHSKTHN-----------------LSS-ITSKADIVVAAIGS---PL----KLTAEYFNPESIVIDVGINR 234 (288)
T ss_pred eCCCCCC-----------------HHH-HHhhCCEEEEccCC---CC----ccCHHHcCCCCEEEEeeccc
Confidence 8842111 111 23568999988752 22 47788999999999998775
No 72
>PLN02516 methylenetetrahydrofolate dehydrogenase (NADP+)
Probab=97.88 E-value=0.00038 Score=70.20 Aligned_cols=197 Identities=18% Similarity=0.239 Sum_probs=121.8
Q ss_pred HHHHHHcCCCceEEeccc----CcHHHHHHHh-cCCCCCEEEecccchHHHHhcccccChhhhhcCceeEEEEeccC---
Q 010101 257 NPAFRHTRFNGIYVPMLV----DDVKEFFRTY-SGTDFAGFSVGIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPID--- 328 (518)
Q Consensus 257 n~~f~~~gl~~~y~~~~~----~~l~~~~~~l-~~~~~~G~~VT~P~K~~v~~~~d~~~~~A~~iGavNTi~~~~~~--- 328 (518)
.+..+++|++..-..++- +++.+.++.+ .++++.|+.|-.|+-.. +| + -+.+.+++--. + -|
T Consensus 61 ~k~a~~~Gi~~~~~~l~~~~s~~el~~~I~~lN~D~~V~GIlvq~PlP~~----id---~-~~i~~~I~p~K-D-VDGl~ 130 (299)
T PLN02516 61 RKACAEVGIKSFDVDLPENISEAELISKVHELNANPDVHGILVQLPLPKH----IN---E-EKILNEISLEK-D-VDGFH 130 (299)
T ss_pred HHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCCCCCCeEEEecCCCCC----cC---H-HHHHhccCccc-c-cCccC
Confidence 367889999976555543 3577777777 57789999999997421 11 1 11112222110 0 01
Q ss_pred ----CeEE-E--e----ecCHHHHHHHHHHHHHhhccCCCCCCCCcccCCcEEEEEccch-hHHHHHHHHHHCCCeEEEE
Q 010101 329 ----GKLV-G--Y----NTDCESAISAIEDALRERQGINGVASHTSPIAGKIFVLVGAGG-AGRALAFGAKSRGARVIIF 396 (518)
Q Consensus 329 ----g~l~-G--~----NTD~~G~~~~l~~~l~~~~~~~~~~~~~~~l~~k~vlvlGaGg-~araia~~L~~~G~~v~i~ 396 (518)
|++. | . ----.|++.-|+. .+ .+++||+++|+|-+. .||.++.-|.+.|+.|+++
T Consensus 131 ~~n~g~l~~~~~~~~~~PcTp~avi~lL~~-----~~--------i~l~Gk~vvVIGRS~iVGkPla~lL~~~~ATVtvc 197 (299)
T PLN02516 131 PLNIGKLAMKGREPLFLPCTPKGCLELLSR-----SG--------IPIKGKKAVVVGRSNIVGLPVSLLLLKADATVTVV 197 (299)
T ss_pred HhhHhhHhcCCCCCCCCCCCHHHHHHHHHH-----hC--------CCCCCCEEEEECCCccchHHHHHHHHHCCCEEEEe
Confidence 1221 1 1 1113555555543 12 678999999999986 9999999999999999999
Q ss_pred eCCHHHHHHHHHHhcCcccccccccccCCCCccEEEEcCCCCCCCCCCCCCCChhhhcCCCEEEEEeeCCCch-------
Q 010101 397 NRNYERAKALADAVSGEALHFEYLHEFFPEKGMILANASAIGMEPNSDQSPVPKEALKAYELVFDAVYTPRNT------- 469 (518)
Q Consensus 397 nRt~~ka~~la~~~~~~~~~~~~l~~~~~~~~divInatp~g~~~~~~~~~~~~~~l~~~~~v~Di~Y~P~~T------- 469 (518)
+..... +.+ ...++|+||.|++. |. .+..++++++.+|+|+-.+....
T Consensus 198 hs~T~n-----------------l~~-~~~~ADIvv~AvGk---~~----~i~~~~vk~gavVIDvGin~~~~~~~~~g~ 252 (299)
T PLN02516 198 HSRTPD-----------------PES-IVREADIVIAAAGQ---AM----MIKGDWIKPGAAVIDVGTNAVSDPSKKSGY 252 (299)
T ss_pred CCCCCC-----------------HHH-HHhhCCEEEEcCCC---cC----ccCHHHcCCCCEEEEeeccccCcccccCCC
Confidence 753221 112 23568999988743 22 47788999999999997765211
Q ss_pred HHH-----HHHHHC-CC--eeeccH-----HHHHHHHHHHHHHhc
Q 010101 470 RLL-----REAAEV-GA--TVVSGV-----EMFIRQALGQFRLFT 501 (518)
Q Consensus 470 ~ll-----~~A~~~-G~--~~i~G~-----~ml~~Qa~~qf~lw~ 501 (518)
.+. +.+++. ++ ++-.|. -||+...+.+.+.|+
T Consensus 253 kl~GDvd~e~v~~~a~~iTPVPGGVGp~T~a~L~~N~v~a~~~~~ 297 (299)
T PLN02516 253 RLVGDVDFAEVSKVAGWITPVPGGVGPMTVAMLLKNTVDGAKRVF 297 (299)
T ss_pred ceEcCcChHHhhhhceEecCCCCCchHHHHHHHHHHHHHHHHHHh
Confidence 010 222222 22 233354 488888888887775
No 73
>PLN02616 tetrahydrofolate dehydrogenase/cyclohydrolase, putative
Probab=97.88 E-value=0.00054 Score=70.42 Aligned_cols=198 Identities=22% Similarity=0.271 Sum_probs=122.9
Q ss_pred HHHHHHcCCCceEEecccC----cHHHHHHHh-cCCCCCEEEecccchHHHHhcccccChhhhhcCceeEEEEeccCC--
Q 010101 257 NPAFRHTRFNGIYVPMLVD----DVKEFFRTY-SGTDFAGFSVGIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDG-- 329 (518)
Q Consensus 257 n~~f~~~gl~~~y~~~~~~----~l~~~~~~l-~~~~~~G~~VT~P~K~~v~~~~d~~~~~A~~iGavNTi~~~~~~g-- 329 (518)
.+..+++|++..-..++-+ ++.+.++.+ .++++.|+.|-.|+... +|+ . +.+.+++--. + -||
T Consensus 125 ~K~~e~~GI~~~~~~lpe~~te~ell~~I~~LN~D~~V~GIlVQlPLP~~----id~---~-~i~~aI~P~K-D-VDGl~ 194 (364)
T PLN02616 125 KKACDSVGINSFEVRLPEDSTEQEVLKFISGFNNDPSVHGILVQLPLPSH----MDE---Q-NILNAVSIEK-D-VDGFH 194 (364)
T ss_pred HHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHcCCCCCCEEEEeCCCCCC----CCH---H-HHHhccCccc-C-cccCC
Confidence 3678999999765555432 566677777 46789999999998532 111 1 1112222111 1 011
Q ss_pred -----eEE-Ee-e-----cCHHHHHHHHHHHHHhhccCCCCCCCCcccCCcEEEEEccch-hHHHHHHHHHHCCCeEEEE
Q 010101 330 -----KLV-GY-N-----TDCESAISAIEDALRERQGINGVASHTSPIAGKIFVLVGAGG-AGRALAFGAKSRGARVIIF 396 (518)
Q Consensus 330 -----~l~-G~-N-----TD~~G~~~~l~~~l~~~~~~~~~~~~~~~l~~k~vlvlGaGg-~araia~~L~~~G~~v~i~ 396 (518)
++. |. + ---.|++.-|+. .+ .+++||+|+|||-+. .|+.++.-|.+.|+.|+++
T Consensus 195 p~N~G~L~~g~~~~~f~PCTp~avielL~~-----y~--------i~l~GK~vvVIGRS~iVGkPLa~LL~~~~ATVTic 261 (364)
T PLN02616 195 PLNIGRLAMRGREPLFVPCTPKGCIELLHR-----YN--------VEIKGKRAVVIGRSNIVGMPAALLLQREDATVSIV 261 (364)
T ss_pred hhhhHHHhcCCCCCCCCCCCHHHHHHHHHH-----hC--------CCCCCCEEEEECCCccccHHHHHHHHHCCCeEEEe
Confidence 121 10 1 114666666553 12 678999999999986 9999999999999999998
Q ss_pred eCCHHHHHHHHHHhcCcccccccccccCCCCccEEEEcCCCCCCCCCCCCCCChhhhcCCCEEEEEeeCCCc--------
Q 010101 397 NRNYERAKALADAVSGEALHFEYLHEFFPEKGMILANASAIGMEPNSDQSPVPKEALKAYELVFDAVYTPRN-------- 468 (518)
Q Consensus 397 nRt~~ka~~la~~~~~~~~~~~~l~~~~~~~~divInatp~g~~~~~~~~~~~~~~l~~~~~v~Di~Y~P~~-------- 468 (518)
...-.. +.+ ...++||||.|++. |. .+..++++++.+|+|+-.++..
T Consensus 262 Hs~T~n-----------------l~~-~~r~ADIVIsAvGk---p~----~i~~d~vK~GAvVIDVGIn~~~~~~~~~g~ 316 (364)
T PLN02616 262 HSRTKN-----------------PEE-ITREADIIISAVGQ---PN----MVRGSWIKPGAVVIDVGINPVEDASSPRGY 316 (364)
T ss_pred CCCCCC-----------------HHH-HHhhCCEEEEcCCC---cC----cCCHHHcCCCCEEEeccccccccccccCCC
Confidence 753221 112 23568999988853 22 3778899999999999766421
Q ss_pred -----hHHHHHHHHCCC--eeeccHH-----HHHHHHHHHHHHhcC
Q 010101 469 -----TRLLREAAEVGA--TVVSGVE-----MFIRQALGQFRLFTG 502 (518)
Q Consensus 469 -----T~ll~~A~~~G~--~~i~G~~-----ml~~Qa~~qf~lw~g 502 (518)
-.|-...+..++ ++=.|.+ ||+..-+.+.+.+.+
T Consensus 317 klvGDVdfe~v~~~as~ITPVPGGVGpmTva~Ll~N~~~aa~~~~~ 362 (364)
T PLN02616 317 RLVGDVCYEEACKVASAVTPVPGGVGPMTIAMLLSNTLTSAKRIHN 362 (364)
T ss_pred eEEecCcHHHHHhhccccCCCCCchHHHHHHHHHHHHHHHHHHhhc
Confidence 233222233333 2445665 778877777665543
No 74
>PRK14166 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=97.85 E-value=0.00026 Score=70.84 Aligned_cols=166 Identities=16% Similarity=0.216 Sum_probs=105.7
Q ss_pred HHHHHcCCCceEEeccc----CcHHHHHHHh-cCCCCCEEEecccchHHHH--hcccccChhhhhcCceeEEEEeccCCe
Q 010101 258 PAFRHTRFNGIYVPMLV----DDVKEFFRTY-SGTDFAGFSVGIPHKEPAV--ACCDEVHPLAKSIGAVNTIIRRPIDGK 330 (518)
Q Consensus 258 ~~f~~~gl~~~y~~~~~----~~l~~~~~~l-~~~~~~G~~VT~P~K~~v~--~~~d~~~~~A~~iGavNTi~~~~~~g~ 330 (518)
+..+++|++.....++- +++.+.++.+ .++++.|+.|-.|+...+- ..+..++|. +-+-..+.+ + -|+
T Consensus 53 k~a~~~Gi~~~~~~l~~~~t~~~l~~~I~~lN~D~~V~GIivq~PLP~~i~~~~i~~~I~p~-KDVDGl~~~-N---~g~ 127 (282)
T PRK14166 53 KACEECGIKSLVYHLNENTTQNELLALINTLNHDDSVHGILVQLPLPDHICKDLILESIISS-KDVDGFHPI-N---VGY 127 (282)
T ss_pred HHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCCCCCCEEEEeCCCCCCCCHHHHHhccCcc-cCcccCChh-h---hHH
Confidence 66789999987776653 3566666666 4678999999999753221 111111111 111111111 0 011
Q ss_pred E-EEee-----cCHHHHHHHHHHHHHhhccCCCCCCCCcccCCcEEEEEccch-hHHHHHHHHHHCCCeEEEEeCCHHHH
Q 010101 331 L-VGYN-----TDCESAISAIEDALRERQGINGVASHTSPIAGKIFVLVGAGG-AGRALAFGAKSRGARVIIFNRNYERA 403 (518)
Q Consensus 331 l-~G~N-----TD~~G~~~~l~~~l~~~~~~~~~~~~~~~l~~k~vlvlGaGg-~araia~~L~~~G~~v~i~nRt~~ka 403 (518)
+ .|.+ ---.|++.-|+. .+ .+++||+++|+|-+. .||.++.-|.+.|+.|+++.+.....
T Consensus 128 l~~g~~~~~~PcTp~avi~lL~~-----y~--------i~l~Gk~vvVvGrS~iVGkPla~lL~~~~atVt~chs~T~nl 194 (282)
T PRK14166 128 LNLGLESGFLPCTPLGVMKLLKA-----YE--------IDLEGKDAVIIGASNIVGRPMATMLLNAGATVSVCHIKTKDL 194 (282)
T ss_pred HhcCCCCCCcCCCHHHHHHHHHH-----hC--------CCCCCCEEEEECCCCcchHHHHHHHHHCCCEEEEeCCCCCCH
Confidence 1 1211 114566665543 12 678999999999986 99999999999999999988643221
Q ss_pred HHHHHHhcCcccccccccccCCCCccEEEEcCCCCCCCCCCCCCCChhhhcCCCEEEEEeeCC
Q 010101 404 KALADAVSGEALHFEYLHEFFPEKGMILANASAIGMEPNSDQSPVPKEALKAYELVFDAVYTP 466 (518)
Q Consensus 404 ~~la~~~~~~~~~~~~l~~~~~~~~divInatp~g~~~~~~~~~~~~~~l~~~~~v~Di~Y~P 466 (518)
.+ ...++||||.|++. |. .+..++++++.+|+|+-.++
T Consensus 195 -----------------~~-~~~~ADIvIsAvGk---p~----~i~~~~vk~GavVIDvGin~ 232 (282)
T PRK14166 195 -----------------SL-YTRQADLIIVAAGC---VN----LLRSDMVKEGVIVVDVGINR 232 (282)
T ss_pred -----------------HH-HHhhCCEEEEcCCC---cC----ccCHHHcCCCCEEEEecccc
Confidence 11 23568999988753 22 37788999999999997765
No 75
>PRK14184 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=97.85 E-value=0.00074 Score=67.72 Aligned_cols=194 Identities=18% Similarity=0.229 Sum_probs=122.2
Q ss_pred HHHHHHcCCCceEEeccc----CcHHHHHHHh-cCCCCCEEEecccchHHHHhcccccChhhhhcCceeEEEEeccCCeE
Q 010101 257 NPAFRHTRFNGIYVPMLV----DDVKEFFRTY-SGTDFAGFSVGIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKL 331 (518)
Q Consensus 257 n~~f~~~gl~~~y~~~~~----~~l~~~~~~l-~~~~~~G~~VT~P~K~~v~~~~d~~~~~A~~iGavNTi~~~~~~g~l 331 (518)
.++.+++|++.....++- +++.+.++.+ .++...|+.|-.|+-.. +| +. +.+.+++.-. + -|| +
T Consensus 53 ~k~~~~~Gi~~~~~~l~~~~~~~~l~~~I~~lN~d~~V~GIlvqlPLP~~----id---~~-~i~~~I~p~K-D-VDG-l 121 (286)
T PRK14184 53 ERACEDAGIVSEAFRLPADTTQEELEDLIAELNARPDIDGILLQLPLPKG----LD---SQ-RCLELIDPAK-D-VDG-F 121 (286)
T ss_pred HHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCCCcCceEEEecCCCCC----CC---HH-HHHhccCccc-C-ccc-C
Confidence 367899999988777664 3566777777 57789999999997532 22 11 1222222211 1 012 2
Q ss_pred EEee-------------cCHHHHHHHHHHHHHhhccCCCCCCCCcccCCcEEEEEccch-hHHHHHHHHHH----CCCeE
Q 010101 332 VGYN-------------TDCESAISAIEDALRERQGINGVASHTSPIAGKIFVLVGAGG-AGRALAFGAKS----RGARV 393 (518)
Q Consensus 332 ~G~N-------------TD~~G~~~~l~~~l~~~~~~~~~~~~~~~l~~k~vlvlGaGg-~araia~~L~~----~G~~v 393 (518)
+-+| ---.|++.-|+. .+ .+++||+++|+|-+. .|+.++.-|.+ .|+.|
T Consensus 122 ~~~N~g~l~~~~~~~~PcTp~av~~lL~~-----~~--------i~l~Gk~vvViGrS~iVG~Pla~lL~~~~~~~~AtV 188 (286)
T PRK14184 122 HPENMGRLALGLPGFRPCTPAGVMTLLER-----YG--------LSPAGKKAVVVGRSNIVGKPLALMLGAPGKFANATV 188 (286)
T ss_pred CHhhHHHHhCCCCCCCCCCHHHHHHHHHH-----hC--------CCCCCCEEEEECCCccchHHHHHHHhCCcccCCCEE
Confidence 2222 124566665543 12 678999999999986 99999999998 78899
Q ss_pred EEEeCCHHHHHHHHHHhcCcccccccccccCCCCccEEEEcCCCCCCCCCCCCCCChhhhcCCCEEEEEeeCCC------
Q 010101 394 IIFNRNYERAKALADAVSGEALHFEYLHEFFPEKGMILANASAIGMEPNSDQSPVPKEALKAYELVFDAVYTPR------ 467 (518)
Q Consensus 394 ~i~nRt~~ka~~la~~~~~~~~~~~~l~~~~~~~~divInatp~g~~~~~~~~~~~~~~l~~~~~v~Di~Y~P~------ 467 (518)
+++..+.... . + ...++|+||.|++. |. .+..++++++.+|+|+-.++.
T Consensus 189 t~~hs~t~~l---~--------------~-~~~~ADIVI~AvG~---p~----li~~~~vk~GavVIDVGi~~~~~~l~G 243 (286)
T PRK14184 189 TVCHSRTPDL---A--------------E-ECREADFLFVAIGR---PR----FVTADMVKPGAVVVDVGINRTDDGLVG 243 (286)
T ss_pred EEEeCCchhH---H--------------H-HHHhCCEEEEecCC---CC----cCCHHHcCCCCEEEEeeeeccCCCccC
Confidence 9987653221 1 1 23568999988842 32 377889999999999987762
Q ss_pred chHHHHHHHHCCC-e-eeccH-----HHHHHHHHHHHHH
Q 010101 468 NTRLLREAAEVGA-T-VVSGV-----EMFIRQALGQFRL 499 (518)
Q Consensus 468 ~T~ll~~A~~~G~-~-~i~G~-----~ml~~Qa~~qf~l 499 (518)
+..|-...+..++ . +=.|. -||+.+.+.+.+.
T Consensus 244 DVdf~~v~~~a~~iTPVPGGVGp~Tva~Ll~N~~~a~~~ 282 (286)
T PRK14184 244 DCDFEGLSDVASAITPVPGGVGPMTIAQLLVNTVQSWKE 282 (286)
T ss_pred CccHHHHHhhceEecCCCCCChHHHHHHHHHHHHHHHHH
Confidence 2444222233343 2 22344 4888877766543
No 76
>PRK14173 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=97.85 E-value=0.00024 Score=71.19 Aligned_cols=162 Identities=19% Similarity=0.276 Sum_probs=105.4
Q ss_pred HHHHHHcCCCceEEeccc----CcHHHHHHHh-cCCCCCEEEecccchHHHHhcccccChhhhhcCceeEEEEeccCC--
Q 010101 257 NPAFRHTRFNGIYVPMLV----DDVKEFFRTY-SGTDFAGFSVGIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDG-- 329 (518)
Q Consensus 257 n~~f~~~gl~~~y~~~~~----~~l~~~~~~l-~~~~~~G~~VT~P~K~~v~~~~d~~~~~A~~iGavNTi~~~~~~g-- 329 (518)
-+..+++|++.....++- +++.+.++.+ .+.++.|+-|-+|+-.. +|+ . +.+.+++--. + -||
T Consensus 51 ~k~~~~~Gi~~~~~~l~~~~~~~el~~~I~~lN~D~~V~GIlvqlPLP~~----i~~---~-~i~~~I~p~K-D-VDGl~ 120 (287)
T PRK14173 51 DRQAKALGLRSQVEVLPESTSQEELLELIARLNADPEVDGILVQLPLPPH----IDF---Q-RVLEAIDPLK-D-VDGFH 120 (287)
T ss_pred HHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCCCCCCEEEEeCCCCCC----CCH---H-HHHhccCccc-c-ccccC
Confidence 367899999988777763 3567777777 46679999999997532 111 1 1222222211 1 011
Q ss_pred -----eEE-Ee----ecCHHHHHHHHHHHHHhhccCCCCCCCCcccCCcEEEEEccch-hHHHHHHHHHHCCCeEEEEeC
Q 010101 330 -----KLV-GY----NTDCESAISAIEDALRERQGINGVASHTSPIAGKIFVLVGAGG-AGRALAFGAKSRGARVIIFNR 398 (518)
Q Consensus 330 -----~l~-G~----NTD~~G~~~~l~~~l~~~~~~~~~~~~~~~l~~k~vlvlGaGg-~araia~~L~~~G~~v~i~nR 398 (518)
+++ |. ----.|+++-|+. .+ .+++||+++|+|.+. .|+.++.-|.+.|+.|+++.+
T Consensus 121 ~~N~g~l~~~~~~~~PcTp~avi~lL~~-----~~--------i~l~Gk~vvViGrS~iVGkPla~lL~~~~aTVtichs 187 (287)
T PRK14173 121 PLNVGRLWMGGEALEPCTPAGVVRLLKH-----YG--------IPLAGKEVVVVGRSNIVGKPLAALLLREDATVTLAHS 187 (287)
T ss_pred hhhhHHHhcCCCCCCCCCHHHHHHHHHH-----cC--------CCCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEeCC
Confidence 111 11 1123455555443 12 678999999999986 999999999999999999875
Q ss_pred CHHHHHHHHHHhcCcccccccccccCCCCccEEEEcCCCCCCCCCCCCCCChhhhcCCCEEEEEeeCC
Q 010101 399 NYERAKALADAVSGEALHFEYLHEFFPEKGMILANASAIGMEPNSDQSPVPKEALKAYELVFDAVYTP 466 (518)
Q Consensus 399 t~~ka~~la~~~~~~~~~~~~l~~~~~~~~divInatp~g~~~~~~~~~~~~~~l~~~~~v~Di~Y~P 466 (518)
.... +.+ ...++||||.|++. |. .+..++++++.+|+|+-.++
T Consensus 188 ~T~~-----------------l~~-~~~~ADIvIsAvGk---p~----~i~~~~vk~GavVIDVGin~ 230 (287)
T PRK14173 188 KTQD-----------------LPA-VTRRADVLVVAVGR---PH----LITPEMVRPGAVVVDVGINR 230 (287)
T ss_pred CCCC-----------------HHH-HHhhCCEEEEecCC---cC----ccCHHHcCCCCEEEEccCcc
Confidence 4221 111 23568999988853 22 36788999999999997664
No 77
>PRK14169 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=97.82 E-value=0.00038 Score=69.67 Aligned_cols=200 Identities=19% Similarity=0.224 Sum_probs=121.8
Q ss_pred HHHHHHHHcCCCceEEecccC----cHHHHHHHh-cCCCCCEEEecccchHHHH--hcccccChhhhhcCceeEEEEecc
Q 010101 255 LHNPAFRHTRFNGIYVPMLVD----DVKEFFRTY-SGTDFAGFSVGIPHKEPAV--ACCDEVHPLAKSIGAVNTIIRRPI 327 (518)
Q Consensus 255 ~hn~~f~~~gl~~~y~~~~~~----~l~~~~~~l-~~~~~~G~~VT~P~K~~v~--~~~d~~~~~A~~iGavNTi~~~~~ 327 (518)
.-.+..+++|++.....++-+ ++...++.+ .++++.|+-|-.|+...+- ..++.++|. +-+-..+..-
T Consensus 50 ~k~k~a~~~Gi~~~~~~l~~~~~~~el~~~I~~lN~D~~V~GIlvqlPLp~~i~~~~i~~~I~p~-KDVDGl~~~N---- 124 (282)
T PRK14169 50 NKQRRAEDIGVRSLMFRLPEATTQADLLAKVAELNHDPDVDAILVQLPLPAGLDEQAVIDAIDPD-KDVDGFSPVS---- 124 (282)
T ss_pred HHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCCCCCCEEEEeCCCCCCCCHHHHHhhcCcc-cCcccCChhh----
Confidence 444788999999877777642 566667666 5778999999999763221 112111111 1111111100
Q ss_pred CCeEE-E----eecCHHHHHHHHHHHHHhhccCCCCCCCCcccCCcEEEEEccch-hHHHHHHHHHHCCCeEEEEe-CCH
Q 010101 328 DGKLV-G----YNTDCESAISAIEDALRERQGINGVASHTSPIAGKIFVLVGAGG-AGRALAFGAKSRGARVIIFN-RNY 400 (518)
Q Consensus 328 ~g~l~-G----~NTD~~G~~~~l~~~l~~~~~~~~~~~~~~~l~~k~vlvlGaGg-~araia~~L~~~G~~v~i~n-Rt~ 400 (518)
-|++. | .----.|++.-|+. .+ .+++||+++|+|-+. .|+.++.-|...|+.|+++. ||.
T Consensus 125 ~g~l~~~~~~~~PcTp~avi~lL~~-----~~--------i~l~Gk~vvViGrS~iVGkPla~lL~~~~atVtichs~T~ 191 (282)
T PRK14169 125 VGRLWANEPTVVASTPYGIMALLDA-----YD--------IDVAGKRVVIVGRSNIVGRPLAGLMVNHDATVTIAHSKTR 191 (282)
T ss_pred hHHHhcCCCCCCCCCHHHHHHHHHH-----hC--------CCCCCCEEEEECCCccchHHHHHHHHHCCCEEEEECCCCC
Confidence 01111 1 01124566665543 12 678999999999986 99999999999999999995 442
Q ss_pred HHHHHHHHHhcCcccccccccccCCCCccEEEEcCCCCCCCCCCCCCCChhhhcCCCEEEEEeeCCC-------chHHHH
Q 010101 401 ERAKALADAVSGEALHFEYLHEFFPEKGMILANASAIGMEPNSDQSPVPKEALKAYELVFDAVYTPR-------NTRLLR 473 (518)
Q Consensus 401 ~ka~~la~~~~~~~~~~~~l~~~~~~~~divInatp~g~~~~~~~~~~~~~~l~~~~~v~Di~Y~P~-------~T~ll~ 473 (518)
+ | .+ ...++|+||.|++. |. .+..++++++.+|+|+-.++. +-.+-.
T Consensus 192 ~----l--------------~~-~~~~ADIvI~AvG~---p~----~i~~~~vk~GavVIDvGin~~~~gkl~GDVd~~~ 245 (282)
T PRK14169 192 N----L--------------KQ-LTKEADILVVAVGV---PH----FIGADAVKPGAVVIDVGISRGADGKLLGDVDEAA 245 (282)
T ss_pred C----H--------------HH-HHhhCCEEEEccCC---cC----ccCHHHcCCCcEEEEeeccccCCCCeeecCcHHH
Confidence 2 1 11 23568999988853 22 377889999999999988762 223322
Q ss_pred HHHHCCC--eeeccH-----HHHHHHHHHHHH
Q 010101 474 EAAEVGA--TVVSGV-----EMFIRQALGQFR 498 (518)
Q Consensus 474 ~A~~~G~--~~i~G~-----~ml~~Qa~~qf~ 498 (518)
..+..++ ++=.|. -||+...+.+.+
T Consensus 246 v~~~a~~iTPVPGGVGp~T~a~L~~N~~~a~~ 277 (282)
T PRK14169 246 VAPIASAITPVPGGVGPMTIASLMAQTVTLAK 277 (282)
T ss_pred HHhhccEecCCCCCcHHHHHHHHHHHHHHHHH
Confidence 2233333 233463 477777666543
No 78
>PRK14183 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=97.82 E-value=0.00034 Score=69.87 Aligned_cols=168 Identities=18% Similarity=0.233 Sum_probs=105.8
Q ss_pred HHHHHHHcCCCceEEeccc----CcHHHHHHHh-cCCCCCEEEecccchHHH--HhcccccChhhhhcCceeEEEEeccC
Q 010101 256 HNPAFRHTRFNGIYVPMLV----DDVKEFFRTY-SGTDFAGFSVGIPHKEPA--VACCDEVHPLAKSIGAVNTIIRRPID 328 (518)
Q Consensus 256 hn~~f~~~gl~~~y~~~~~----~~l~~~~~~l-~~~~~~G~~VT~P~K~~v--~~~~d~~~~~A~~iGavNTi~~~~~~ 328 (518)
-.++.+++|++..-..++- +++.+.++.+ .+++..|+.|-.|....+ ...++.++|. +-+-..+-+ + -
T Consensus 52 k~k~a~~~Gi~~~~~~l~~~~~~~~l~~~I~~lN~D~~V~GIlvq~PlP~~i~~~~i~~~I~p~-KDVDGl~~~-n---~ 126 (281)
T PRK14183 52 KAKACDRVGIYSITHEMPSTISQKEILETIAMMNNNPNIDGILVQLPLPKHIDTTKILEAIDPK-KDVDGFHPY-N---V 126 (281)
T ss_pred HHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCCCccCeEEEeCCCCCCCCHHHHHhccCch-hcccccChh-h---h
Confidence 3467889999976555543 3566777777 577899999999975221 1111111111 111111110 0 0
Q ss_pred CeE-EEee----cCHHHHHHHHHHHHHhhccCCCCCCCCcccCCcEEEEEccc-hhHHHHHHHHHHCCCeEEEEeCCHHH
Q 010101 329 GKL-VGYN----TDCESAISAIEDALRERQGINGVASHTSPIAGKIFVLVGAG-GAGRALAFGAKSRGARVIIFNRNYER 402 (518)
Q Consensus 329 g~l-~G~N----TD~~G~~~~l~~~l~~~~~~~~~~~~~~~l~~k~vlvlGaG-g~araia~~L~~~G~~v~i~nRt~~k 402 (518)
|++ .|.+ ---.|++.-|+. .+ .+++||+++|+|-| -.|+.++.-|.+.|+.|+++......
T Consensus 127 g~l~~g~~~~~PcTp~avi~lL~~-----~~--------i~l~Gk~vvViGrS~~VG~Pla~lL~~~~AtVti~hs~T~~ 193 (281)
T PRK14183 127 GRLVTGLDGFVPCTPLGVMELLEE-----YE--------IDVKGKDVCVVGASNIVGKPMAALLLNANATVDICHIFTKD 193 (281)
T ss_pred hHHhcCCCCCCCCcHHHHHHHHHH-----cC--------CCCCCCEEEEECCCCcchHHHHHHHHHCCCEEEEeCCCCcC
Confidence 111 1111 115566665543 12 67899999999998 59999999999999999998743211
Q ss_pred HHHHHHHhcCcccccccccccCCCCccEEEEcCCCCCCCCCCCCCCChhhhcCCCEEEEEeeCC
Q 010101 403 AKALADAVSGEALHFEYLHEFFPEKGMILANASAIGMEPNSDQSPVPKEALKAYELVFDAVYTP 466 (518)
Q Consensus 403 a~~la~~~~~~~~~~~~l~~~~~~~~divInatp~g~~~~~~~~~~~~~~l~~~~~v~Di~Y~P 466 (518)
| .+ ...++|+||.|++. |. .+..++++++.+|+|+-.++
T Consensus 194 ---l--------------~~-~~~~ADIvV~AvGk---p~----~i~~~~vk~gavvIDvGin~ 232 (281)
T PRK14183 194 ---L--------------KA-HTKKADIVIVGVGK---PN----LITEDMVKEGAIVIDIGINR 232 (281)
T ss_pred ---H--------------HH-HHhhCCEEEEecCc---cc----ccCHHHcCCCcEEEEeeccc
Confidence 1 11 23568999988852 22 37788999999999998765
No 79
>COG0190 FolD 5,10-methylene-tetrahydrofolate dehydrogenase/Methenyl tetrahydrofolate cyclohydrolase [Coenzyme metabolism]
Probab=97.80 E-value=0.00074 Score=67.02 Aligned_cols=217 Identities=18% Similarity=0.226 Sum_probs=137.8
Q ss_pred EEEecCCCCcccCHHHHHHHHHHcCCCceEEeccc----CcHHHHHHHh-cCCCCCEEEecccch-----HHHHhccccc
Q 010101 240 FGLVSNPVGHSKGPILHNPAFRHTRFNGIYVPMLV----DDVKEFFRTY-SGTDFAGFSVGIPHK-----EPAVACCDEV 309 (518)
Q Consensus 240 ~~liG~pi~hS~SP~~hn~~f~~~gl~~~y~~~~~----~~l~~~~~~l-~~~~~~G~~VT~P~K-----~~v~~~~d~~ 309 (518)
.-++|+--+....-.+-.+..++.|+...+..++. +++...++.+ .++++.|.-|-.|.= +.++..++-
T Consensus 35 vilvgddpaS~~YV~~K~k~~~~iGi~~~~~~l~~~~t~~eLl~~I~~lN~D~~v~GIlVQlPLp~hld~~~il~~I~p- 113 (283)
T COG0190 35 VILVGDDPASQVYVRSKKKAAEEIGIASELYDLPEDITEEELLALIDELNADPEVDGILVQLPLPKHLDEQKLLQAIDP- 113 (283)
T ss_pred EEEeCCCHHHHHHHHHHHHHHHHcCCeeEEEeCCCcCCHHHHHHHHHHhcCCCCCcEEEEeCCCCCCCCHHHHHhhcCc-
Confidence 34566655444444566788999999988777753 3677777777 688999999999963 222222210
Q ss_pred ChhhhhcCceeEEEEeccCCeEE-E---e-ecCHHHHHHHHHHHHHhhccCCCCCCCCcccCCcEEEEEccch-hHHHHH
Q 010101 310 HPLAKSIGAVNTIIRRPIDGKLV-G---Y-NTDCESAISAIEDALRERQGINGVASHTSPIAGKIFVLVGAGG-AGRALA 383 (518)
Q Consensus 310 ~~~A~~iGavNTi~~~~~~g~l~-G---~-NTD~~G~~~~l~~~l~~~~~~~~~~~~~~~l~~k~vlvlGaGg-~araia 383 (518)
+..+.-....|. |++. | + -.--.|++..|+.. + .++.|++++|+|.+. .||.++
T Consensus 114 ~KDVDG~hp~N~-------g~L~~~~~~~~PCTp~gi~~ll~~~-----~--------i~l~Gk~~vVVGrS~iVGkPla 173 (283)
T COG0190 114 EKDVDGFHPYNL-------GKLAQGEPGFLPCTPAGIMTLLEEY-----G--------IDLRGKNVVVVGRSNIVGKPLA 173 (283)
T ss_pred CCCccccChhHh-------cchhcCCCCCCCCCHHHHHHHHHHh-----C--------CCCCCCEEEEECCCCcCcHHHH
Confidence 000111111111 2222 2 0 12257888877651 2 678999999999997 999999
Q ss_pred HHHHHCCCeEEEEeCCHHHHHHHHHHhcCcccccccccccCCCCccEEEEcCCCCCCCCCCCCCCChhhhcCCCEEEEEe
Q 010101 384 FGAKSRGARVIIFNRNYERAKALADAVSGEALHFEYLHEFFPEKGMILANASAIGMEPNSDQSPVPKEALKAYELVFDAV 463 (518)
Q Consensus 384 ~~L~~~G~~v~i~nRt~~ka~~la~~~~~~~~~~~~l~~~~~~~~divInatp~g~~~~~~~~~~~~~~l~~~~~v~Di~ 463 (518)
.-|...++.|++++..-.. +.+ ...++|++|.|+.. |+ .+..++++++.+|+|+=
T Consensus 174 ~lL~~~naTVtvcHs~T~~-----------------l~~-~~k~ADIvv~AvG~---p~----~i~~d~vk~gavVIDVG 228 (283)
T COG0190 174 LLLLNANATVTVCHSRTKD-----------------LAS-ITKNADIVVVAVGK---PH----FIKADMVKPGAVVIDVG 228 (283)
T ss_pred HHHHhCCCEEEEEcCCCCC-----------------HHH-HhhhCCEEEEecCC---cc----ccccccccCCCEEEecC
Confidence 9999999999999865321 112 34568999988753 22 35678899999999985
Q ss_pred eCCC-------chHHHHHHHHCCC-eeec-cHH-----HHHHHHHHHHHHhcC
Q 010101 464 YTPR-------NTRLLREAAEVGA-TVVS-GVE-----MFIRQALGQFRLFTG 502 (518)
Q Consensus 464 Y~P~-------~T~ll~~A~~~G~-~~i~-G~~-----ml~~Qa~~qf~lw~g 502 (518)
.+.. +..|-...+..++ .-++ |.+ ||+..-+..++...+
T Consensus 229 inrv~~~kl~GDVdf~~v~~~a~~iTPVPGGVGPmTvamLl~Nt~~a~~~~~~ 281 (283)
T COG0190 229 INRVNDGKLVGDVDFDSVKEKASAITPVPGGVGPMTVAMLLENTLKAAERQRG 281 (283)
T ss_pred CccccCCceEeeccHHHHHHhhcccCCCCCccCHHHHHHHHHHHHHHHHHHhc
Confidence 5532 2444333444443 3455 554 888887777765544
No 80
>PRK14187 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=97.80 E-value=0.00029 Score=70.82 Aligned_cols=163 Identities=18% Similarity=0.221 Sum_probs=105.6
Q ss_pred HHHHHHHcCCCceEEeccc----CcHHHHHHHh-cCCCCCEEEecccchHHHHhcccccChhhhhcCceeEEEEeccC--
Q 010101 256 HNPAFRHTRFNGIYVPMLV----DDVKEFFRTY-SGTDFAGFSVGIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPID-- 328 (518)
Q Consensus 256 hn~~f~~~gl~~~y~~~~~----~~l~~~~~~l-~~~~~~G~~VT~P~K~~v~~~~d~~~~~A~~iGavNTi~~~~~~-- 328 (518)
-.+..+++|++.....++- +++.+.++.+ .++...|+.|-.|+.. ++|+ . +.+.+++--. + -|
T Consensus 53 k~k~a~~~Gi~~~~~~l~~~~~e~~l~~~I~~lN~d~~V~GIlvqlPLP~----~i~~---~-~i~~~I~p~K-D-VDGl 122 (294)
T PRK14187 53 KQRKAEMLGLRSETILLPSTISESSLIEKINELNNDDSVHGILVQLPVPN----HIDK---N-LIINTIDPEK-D-VDGF 122 (294)
T ss_pred HHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCCCCCCEEEEeCCCCC----CCCH---H-HHHhccCccc-C-cccC
Confidence 3477899999987776653 2566666666 5778999999999852 2211 1 1111111110 0 01
Q ss_pred -----CeE-EEee------cCHHHHHHHHHHHHHhhccCCCCCCCCcccCCcEEEEEccch-hHHHHHHHHHHCCCeEEE
Q 010101 329 -----GKL-VGYN------TDCESAISAIEDALRERQGINGVASHTSPIAGKIFVLVGAGG-AGRALAFGAKSRGARVII 395 (518)
Q Consensus 329 -----g~l-~G~N------TD~~G~~~~l~~~l~~~~~~~~~~~~~~~l~~k~vlvlGaGg-~araia~~L~~~G~~v~i 395 (518)
|++ .|.+ ---.|++.-|+. .+ .+++||+++|+|-+. .|+.++.-|.+.|+.|++
T Consensus 123 ~~~n~g~l~~g~~~~~~~PcTp~avi~lL~~-----~~--------i~l~Gk~vvViGrS~iVGkPla~lL~~~~aTVt~ 189 (294)
T PRK14187 123 HNENVGRLFTGQKKNCLIPCTPKGCLYLIKT-----IT--------RNLSGSDAVVIGRSNIVGKPMACLLLGENCTVTT 189 (294)
T ss_pred ChhhHHHHhCCCCCCCccCcCHHHHHHHHHH-----hC--------CCCCCCEEEEECCCccchHHHHHHHhhCCCEEEE
Confidence 111 1221 124555555543 12 678999999999986 999999999999999999
Q ss_pred EeCCHHHHHHHHHHhcCcccccccccccCCCCccEEEEcCCCCCCCCCCCCCCChhhhcCCCEEEEEeeCC
Q 010101 396 FNRNYERAKALADAVSGEALHFEYLHEFFPEKGMILANASAIGMEPNSDQSPVPKEALKAYELVFDAVYTP 466 (518)
Q Consensus 396 ~nRt~~ka~~la~~~~~~~~~~~~l~~~~~~~~divInatp~g~~~~~~~~~~~~~~l~~~~~v~Di~Y~P 466 (518)
+...... +.+ ...++||||.|++. |. .+..++++++.+|+|+-.++
T Consensus 190 chs~T~~-----------------l~~-~~~~ADIvVsAvGk---p~----~i~~~~ik~gaiVIDVGin~ 235 (294)
T PRK14187 190 VHSATRD-----------------LAD-YCSKADILVAAVGI---PN----FVKYSWIKKGAIVIDVGINS 235 (294)
T ss_pred eCCCCCC-----------------HHH-HHhhCCEEEEccCC---cC----ccCHHHcCCCCEEEEecccc
Confidence 8864221 112 23568999988753 22 37788999999999996554
No 81
>PRK14181 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=97.79 E-value=0.00076 Score=67.65 Aligned_cols=169 Identities=17% Similarity=0.247 Sum_probs=107.5
Q ss_pred HHHHHHHHcCCCceEEeccc----CcHHHHHHHh-cCCCCCEEEecccchHHHH--hcccccChhhhhcCceeEEEEecc
Q 010101 255 LHNPAFRHTRFNGIYVPMLV----DDVKEFFRTY-SGTDFAGFSVGIPHKEPAV--ACCDEVHPLAKSIGAVNTIIRRPI 327 (518)
Q Consensus 255 ~hn~~f~~~gl~~~y~~~~~----~~l~~~~~~l-~~~~~~G~~VT~P~K~~v~--~~~d~~~~~A~~iGavNTi~~~~~ 327 (518)
.-.++++++|++.....++- +++.+.++.+ .+.++.|+-|-.|.-..+- ..++.++|. +-+-..+..-
T Consensus 46 ~k~k~~~~~Gi~~~~~~l~~~~t~~el~~~I~~lN~d~~V~GIlvqlPlP~~i~~~~i~~~I~p~-KDVDGl~p~n---- 120 (287)
T PRK14181 46 MKVKKATDLGMVSKAHRLPSDATLSDILKLIHRLNNDPNIHGILVQLPLPKHLDAQAILQAISPD-KDVDGLHPVN---- 120 (287)
T ss_pred HHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCCCCCCeEEEcCCCCCCcCHHHHHhccCcc-cCcccCChhh----
Confidence 34477899999987777654 2577777777 5778999999999753221 111111111 1111111110
Q ss_pred CCeEE-Ee-----ecCHHHHHHHHHHHHHhhccCCCCCCCCcccCCcEEEEEccch-hHHHHHHHHHHC----CCeEEEE
Q 010101 328 DGKLV-GY-----NTDCESAISAIEDALRERQGINGVASHTSPIAGKIFVLVGAGG-AGRALAFGAKSR----GARVIIF 396 (518)
Q Consensus 328 ~g~l~-G~-----NTD~~G~~~~l~~~l~~~~~~~~~~~~~~~l~~k~vlvlGaGg-~araia~~L~~~----G~~v~i~ 396 (518)
-|++. |. ----.|+++-|+. .+ .+++||+++|+|-+. .||.++.-|.+. ++.|+++
T Consensus 121 ~g~l~~g~~~~~~PcTp~avi~lL~~-----~~--------i~l~Gk~vvViGrS~iVGkPla~lL~~~~~~~~AtVtvc 187 (287)
T PRK14181 121 MGKLLLGETDGFIPCTPAGIIELLKY-----YE--------IPLHGRHVAIVGRSNIVGKPLAALLMQKHPDTNATVTLL 187 (287)
T ss_pred HHHHhcCCCCCCCCCCHHHHHHHHHH-----hC--------CCCCCCEEEEECCCccchHHHHHHHHhCcCCCCCEEEEe
Confidence 01111 21 0124566665543 12 678999999999986 999999999988 6799998
Q ss_pred eCCHHHHHHHHHHhcCcccccccccccCCCCccEEEEcCCCCCCCCCCCCCCChhhhcCCCEEEEEeeCC
Q 010101 397 NRNYERAKALADAVSGEALHFEYLHEFFPEKGMILANASAIGMEPNSDQSPVPKEALKAYELVFDAVYTP 466 (518)
Q Consensus 397 nRt~~ka~~la~~~~~~~~~~~~l~~~~~~~~divInatp~g~~~~~~~~~~~~~~l~~~~~v~Di~Y~P 466 (518)
...... +.+ ...++|+||.|++. |. .+..++++++.+|+|+-.++
T Consensus 188 hs~T~~-----------------l~~-~~~~ADIvV~AvG~---p~----~i~~~~ik~GavVIDvGin~ 232 (287)
T PRK14181 188 HSQSEN-----------------LTE-ILKTADIIIAAIGV---PL----FIKEEMIAEKAVIVDVGTSR 232 (287)
T ss_pred CCCCCC-----------------HHH-HHhhCCEEEEccCC---cC----ccCHHHcCCCCEEEEecccc
Confidence 753221 111 23568999988853 22 37889999999999997775
No 82
>PRK06046 alanine dehydrogenase; Validated
Probab=97.75 E-value=0.00011 Score=75.64 Aligned_cols=113 Identities=20% Similarity=0.223 Sum_probs=74.8
Q ss_pred CcEEEEEccchhHHHHHHHHHH-CCC-eEEEEeCCHHHHHHHHHHhcCc----ccccccccccCCCCccEEEEcCCCCCC
Q 010101 367 GKIFVLVGAGGAGRALAFGAKS-RGA-RVIIFNRNYERAKALADAVSGE----ALHFEYLHEFFPEKGMILANASAIGME 440 (518)
Q Consensus 367 ~k~vlvlGaGg~araia~~L~~-~G~-~v~i~nRt~~ka~~la~~~~~~----~~~~~~l~~~~~~~~divInatp~g~~ 440 (518)
-+++.|+|+|+.|+..+.++.. .++ +|+|++|+.++++++++++... ....+++.+ ... +|+|++|||.. .
T Consensus 129 ~~~vgiiG~G~qa~~h~~al~~~~~i~~v~v~~r~~~~~~~~~~~~~~~~~~~v~~~~~~~~-~l~-aDiVv~aTps~-~ 205 (326)
T PRK06046 129 SKVVGIIGAGNQARTQLLALSEVFDLEEVRVYDRTKSSAEKFVERMSSVVGCDVTVAEDIEE-ACD-CDILVTTTPSR-K 205 (326)
T ss_pred CCEEEEECCcHHHHHHHHHHHhhCCceEEEEECCCHHHHHHHHHHHHhhcCceEEEeCCHHH-Hhh-CCEEEEecCCC-C
Confidence 4789999999999999999874 467 8999999999999999887421 111233333 344 89999999863 2
Q ss_pred CCCCCCCCChhhhcCCCEEEEE-eeCCCchHHHHHHHHCCCeeeccHH
Q 010101 441 PNSDQSPVPKEALKAYELVFDA-VYTPRNTRLLREAAEVGATVVSGVE 487 (518)
Q Consensus 441 ~~~~~~~~~~~~l~~~~~v~Di-~Y~P~~T~ll~~A~~~G~~~i~G~~ 487 (518)
|. +..++++++..|.-+ .|.|....+-.+.-++.-.+++-.+
T Consensus 206 P~-----~~~~~l~~g~hV~~iGs~~p~~~El~~~~~~~a~vvvD~~~ 248 (326)
T PRK06046 206 PV-----VKAEWIKEGTHINAIGADAPGKQELDPEILLRAKVVVDDME 248 (326)
T ss_pred cE-----ecHHHcCCCCEEEecCCCCCccccCCHHHHhCCcEEECCHH
Confidence 32 556778887765545 3456543333333233334555443
No 83
>TIGR00872 gnd_rel 6-phosphogluconate dehydrogenase (decarboxylating). This family resembles a larger family (gnd) of bacterial and eukaryotic 6-phosphogluconate dehydrogenases but differs from it by a deep split in a UPGMA similarity clustering tree and the lack of a central region of about 140 residues. Among complete genomes, it is found is found in Bacillus subtilis and Mycobacterium tuberculosis, both of which also contain gnd, and in Aquifex aeolicus. The protein from Methylobacillus flagellatus KT has been characterized as a decarboxylating 6-phosphogluconate dehydrogenase as part of an unusual formaldehyde oxidation cycle. In some sequenced organisms members of this family are the sole 6-phosphogluconate dehydrogenase present and are probably active in the pentose phosphate cycle.
Probab=97.71 E-value=5.7e-05 Score=76.85 Aligned_cols=111 Identities=14% Similarity=0.208 Sum_probs=74.2
Q ss_pred EEEEEccchhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHhcCcccccccccccCCCCccEEEEcCCCCCCCCCCCCCC
Q 010101 369 IFVLVGAGGAGRALAFGAKSRGARVIIFNRNYERAKALADAVSGEALHFEYLHEFFPEKGMILANASAIGMEPNSDQSPV 448 (518)
Q Consensus 369 ~vlvlGaGg~araia~~L~~~G~~v~i~nRt~~ka~~la~~~~~~~~~~~~l~~~~~~~~divInatp~g~~~~~~~~~~ 448 (518)
++.|||.|-||.+++..|.+.|.+|+++||++++++++.+.......+.+++.+ ....+|+|+-++|.+.. .. .+
T Consensus 2 ~Ig~IGlG~mG~~la~~L~~~g~~V~~~dr~~~~~~~l~~~g~~~~~s~~~~~~-~~~~~dvIi~~vp~~~~---~~-v~ 76 (298)
T TIGR00872 2 QLGLIGLGRMGANIVRRLAKRGHDCVGYDHDQDAVKAMKEDRTTGVANLRELSQ-RLSAPRVVWVMVPHGIV---DA-VL 76 (298)
T ss_pred EEEEEcchHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHcCCcccCCHHHHHh-hcCCCCEEEEEcCchHH---HH-HH
Confidence 589999999999999999999999999999999999887642212223333332 33567999999886511 11 01
Q ss_pred C--hhhhcCCCEEEEEeeC-CCchHH-HHHHHHCCCeeec
Q 010101 449 P--KEALKAYELVFDAVYT-PRNTRL-LREAAEVGATVVS 484 (518)
Q Consensus 449 ~--~~~l~~~~~v~Di~Y~-P~~T~l-l~~A~~~G~~~i~ 484 (518)
. ...++++.+++|..-. |..|.- .++.+++|+++++
T Consensus 77 ~~l~~~l~~g~ivid~st~~~~~t~~~~~~~~~~g~~~vd 116 (298)
T TIGR00872 77 EELAPTLEKGDIVIDGGNSYYKDSLRRYKLLKEKGIHLLD 116 (298)
T ss_pred HHHHhhCCCCCEEEECCCCCcccHHHHHHHHHhcCCeEEe
Confidence 1 1135677899998665 444432 3345567766443
No 84
>PRK14185 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=97.71 E-value=0.00047 Score=69.30 Aligned_cols=168 Identities=17% Similarity=0.222 Sum_probs=104.3
Q ss_pred HHHHHHHcCCCceEEeccc----CcHHHHHHHh-cCCCCCEEEecccchHHH--HhcccccChhhhhcCceeEEEEeccC
Q 010101 256 HNPAFRHTRFNGIYVPMLV----DDVKEFFRTY-SGTDFAGFSVGIPHKEPA--VACCDEVHPLAKSIGAVNTIIRRPID 328 (518)
Q Consensus 256 hn~~f~~~gl~~~y~~~~~----~~l~~~~~~l-~~~~~~G~~VT~P~K~~v--~~~~d~~~~~A~~iGavNTi~~~~~~ 328 (518)
-.+.++++|++.....++- +++.+.++.+ .++.+.|+-|-.|+...+ ...++.++|. +-+-..+-+ +-
T Consensus 52 k~k~a~~~Gi~~~~~~l~~~~~~~el~~~I~~lN~D~~V~GIlvqlPLP~~i~~~~i~~~I~p~-KDVDGl~~~----N~ 126 (293)
T PRK14185 52 KVKACEECGFKSSLIRYESDVTEEELLAKVRELNQDDDVDGFIVQLPLPKHISEQKVIEAIDYR-KDVDGFHPI----NV 126 (293)
T ss_pred HHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCCCCCCeEEEecCCCCCCCHHHHHhccCcc-cCcCCCCHh----hH
Confidence 3478899999987666553 2566666666 577899999999975321 1111111111 000000000 00
Q ss_pred CeEE-Ee----ecCHHHHHHHHHHHHHhhccCCCCCCCCcccCCcEEEEEccch-hHHHHHHHHHHC----CCeEEEEeC
Q 010101 329 GKLV-GY----NTDCESAISAIEDALRERQGINGVASHTSPIAGKIFVLVGAGG-AGRALAFGAKSR----GARVIIFNR 398 (518)
Q Consensus 329 g~l~-G~----NTD~~G~~~~l~~~l~~~~~~~~~~~~~~~l~~k~vlvlGaGg-~araia~~L~~~----G~~v~i~nR 398 (518)
|++. |. ----.|+++-|+. .+ .+++||+++|+|-+. .|+.++.-|.+. ++.|+++..
T Consensus 127 g~l~~~~~~~~PcTp~av~~lL~~-----~~--------i~l~GK~vvViGrS~iVGkPla~lL~~~~~~~~aTVtvchs 193 (293)
T PRK14185 127 GRMSIGLPCFVSATPNGILELLKR-----YH--------IETSGKKCVVLGRSNIVGKPMAQLMMQKAYPGDCTVTVCHS 193 (293)
T ss_pred HHHhCCCCCCCCCCHHHHHHHHHH-----hC--------CCCCCCEEEEECCCccchHHHHHHHHcCCCCCCCEEEEecC
Confidence 1111 11 1124566665543 12 678999999999986 999999999988 579999864
Q ss_pred CHHHHHHHHHHhcCcccccccccccCCCCccEEEEcCCCCCCCCCCCCCCChhhhcCCCEEEEEeeCC
Q 010101 399 NYERAKALADAVSGEALHFEYLHEFFPEKGMILANASAIGMEPNSDQSPVPKEALKAYELVFDAVYTP 466 (518)
Q Consensus 399 t~~ka~~la~~~~~~~~~~~~l~~~~~~~~divInatp~g~~~~~~~~~~~~~~l~~~~~v~Di~Y~P 466 (518)
.... +.+ ...++|+||.|++. |. .+..++++++.+|+|+-.++
T Consensus 194 ~T~n-----------------l~~-~~~~ADIvIsAvGk---p~----~i~~~~vk~gavVIDvGin~ 236 (293)
T PRK14185 194 RSKN-----------------LKK-ECLEADIIIAALGQ---PE----FVKADMVKEGAVVIDVGTTR 236 (293)
T ss_pred CCCC-----------------HHH-HHhhCCEEEEccCC---cC----ccCHHHcCCCCEEEEecCcc
Confidence 3211 111 23568999988853 22 37788999999999998765
No 85
>PRK14193 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=97.71 E-value=0.00055 Score=68.60 Aligned_cols=194 Identities=14% Similarity=0.248 Sum_probs=120.2
Q ss_pred HHHHHHHcCCCceEEeccc----CcHHHHHHHh-cCCCCCEEEecccchHHHHhcccccChhhhhcCceeEEEEeccCC-
Q 010101 256 HNPAFRHTRFNGIYVPMLV----DDVKEFFRTY-SGTDFAGFSVGIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDG- 329 (518)
Q Consensus 256 hn~~f~~~gl~~~y~~~~~----~~l~~~~~~l-~~~~~~G~~VT~P~K~~v~~~~d~~~~~A~~iGavNTi~~~~~~g- 329 (518)
--+..+++|++.....++- +++.+.++.+ .++++.|+-|-+|+-. ++| +. +.+.+++--. + -||
T Consensus 53 k~k~a~~~Gi~~~~~~l~~~~t~~el~~~I~~lN~D~~V~GIlvqlPlP~----~id---~~-~i~~~I~p~K-D-VDGl 122 (284)
T PRK14193 53 KHRDCAEVGITSIRRDLPADATQEELNAVIDELNADPACTGYIVQLPLPK----HLD---EN-AVLERIDPAK-D-ADGL 122 (284)
T ss_pred HHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCCCCCCEEEEeCCCCC----CCC---HH-HHHhcCCccc-C-ccCC
Confidence 3467889999987766653 3566666666 5778999999999752 111 11 1222222211 0 011
Q ss_pred ------eE-EEe----ecCHHHHHHHHHHHHHhhccCCCCCCCCcccCCcEEEEEccch-hHHHHHHHHHH--CCCeEEE
Q 010101 330 ------KL-VGY----NTDCESAISAIEDALRERQGINGVASHTSPIAGKIFVLVGAGG-AGRALAFGAKS--RGARVII 395 (518)
Q Consensus 330 ------~l-~G~----NTD~~G~~~~l~~~l~~~~~~~~~~~~~~~l~~k~vlvlGaGg-~araia~~L~~--~G~~v~i 395 (518)
++ .|. -.--.|++.-|+. .+ .+++||+++|+|.+. .|+.++.-|.+ .|+.|++
T Consensus 123 ~~~n~g~l~~~~~~~~PcTp~av~~ll~~-----~~--------i~l~Gk~vvViGrS~~VGkPla~lL~~~~~~atVtv 189 (284)
T PRK14193 123 HPTNLGRLVLNEPAPLPCTPRGIVHLLRR-----YD--------VELAGAHVVVIGRGVTVGRPIGLLLTRRSENATVTL 189 (284)
T ss_pred ChhhhhHHhCCCCCCCCCCHHHHHHHHHH-----hC--------CCCCCCEEEEECCCCcchHHHHHHHhhccCCCEEEE
Confidence 11 111 1224566665543 12 678999999999986 99999999988 6889999
Q ss_pred EeCCHHHHHHHHHHhcCcccccccccccCCCCccEEEEcCCCCCCCCCCCCCCChhhhcCCCEEEEEeeCCC-------c
Q 010101 396 FNRNYERAKALADAVSGEALHFEYLHEFFPEKGMILANASAIGMEPNSDQSPVPKEALKAYELVFDAVYTPR-------N 468 (518)
Q Consensus 396 ~nRt~~ka~~la~~~~~~~~~~~~l~~~~~~~~divInatp~g~~~~~~~~~~~~~~l~~~~~v~Di~Y~P~-------~ 468 (518)
+...... +.+ ...++|+||.|++. |. .+..++++++.+|+|+-.++. +
T Consensus 190 chs~T~~-----------------l~~-~~k~ADIvV~AvGk---p~----~i~~~~ik~GavVIDvGin~~~~gkl~GD 244 (284)
T PRK14193 190 CHTGTRD-----------------LAA-HTRRADIIVAAAGV---AH----LVTADMVKPGAAVLDVGVSRAGDGKLVGD 244 (284)
T ss_pred eCCCCCC-----------------HHH-HHHhCCEEEEecCC---cC----ccCHHHcCCCCEEEEccccccCCCcEEee
Confidence 9864221 112 23568999988853 22 377889999999999987762 1
Q ss_pred hHHHHHHHH-CC-Ce-eeccHH-----HHHHHHHHHHHH
Q 010101 469 TRLLREAAE-VG-AT-VVSGVE-----MFIRQALGQFRL 499 (518)
Q Consensus 469 T~ll~~A~~-~G-~~-~i~G~~-----ml~~Qa~~qf~l 499 (518)
-. ..+++ .+ +. +=.|.+ ||+.+.+.+.+.
T Consensus 245 vd--~~v~~~a~~iTPVPGGVGp~T~a~L~~N~~~a~~~ 281 (284)
T PRK14193 245 VH--PDVWEVAGAVSPNPGGVGPMTRAFLLTNVVERAER 281 (284)
T ss_pred cC--HhHHhhCCEEeCCCCChhHHHHHHHHHHHHHHHHH
Confidence 12 22332 23 22 334544 777777766553
No 86
>COG0287 TyrA Prephenate dehydrogenase [Amino acid transport and metabolism]
Probab=97.68 E-value=4.5e-05 Score=76.60 Aligned_cols=117 Identities=21% Similarity=0.129 Sum_probs=80.4
Q ss_pred cEEEEEccchhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHH-HhcCcccccccc-cccCCCCccEEEEcCCCCCCCCCCC
Q 010101 368 KIFVLVGAGGAGRALAFGAKSRGARVIIFNRNYERAKALAD-AVSGEALHFEYL-HEFFPEKGMILANASAIGMEPNSDQ 445 (518)
Q Consensus 368 k~vlvlGaGg~araia~~L~~~G~~v~i~nRt~~ka~~la~-~~~~~~~~~~~l-~~~~~~~~divInatp~g~~~~~~~ 445 (518)
++++|+|.|.+|++++..|.+.|..+.|++++.+++...+. +++.......+. .. ...++|+||-|+|+......-.
T Consensus 4 ~~v~IvG~GliG~s~a~~l~~~g~~v~i~g~d~~~~~~~~a~~lgv~d~~~~~~~~~-~~~~aD~VivavPi~~~~~~l~ 82 (279)
T COG0287 4 MKVGIVGLGLMGGSLARALKEAGLVVRIIGRDRSAATLKAALELGVIDELTVAGLAE-AAAEADLVIVAVPIEATEEVLK 82 (279)
T ss_pred cEEEEECCchHHHHHHHHHHHcCCeEEEEeecCcHHHHHHHhhcCcccccccchhhh-hcccCCEEEEeccHHHHHHHHH
Confidence 68999999999999999999999988899988877655433 355322111111 11 3456899999999864322111
Q ss_pred CCCChhhhcCCCEEEEEeeCCCchHHHHHHHHCCC---eeeccHHHH
Q 010101 446 SPVPKEALKAYELVFDAVYTPRNTRLLREAAEVGA---TVVSGVEMF 489 (518)
Q Consensus 446 ~~~~~~~l~~~~~v~Di~Y~P~~T~ll~~A~~~G~---~~i~G~~ml 489 (518)
. +.+ .++++.+|.|+... .++.++.+++.+- ++++|-.|+
T Consensus 83 ~-l~~-~l~~g~iv~Dv~S~--K~~v~~a~~~~~~~~~~~vg~HPM~ 125 (279)
T COG0287 83 E-LAP-HLKKGAIVTDVGSV--KSSVVEAMEKYLPGDVRFVGGHPMF 125 (279)
T ss_pred H-hcc-cCCCCCEEEecccc--cHHHHHHHHHhccCCCeeEecCCCC
Confidence 1 111 36788999999776 6777788877653 588877776
No 87
>PF02826 2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; InterPro: IPR006140 A number of NAD-dependent 2-hydroxyacid dehydrogenases which seem to be specific for the D-isomer of their substrate have been shown to be functionally and structurally related. All contain a glycine-rich region located in the central section of these enzymes, this region corresponds to the NAD-binding domain. The catalytic domain is described in IPR006139 from INTERPRO ; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0048037 cofactor binding, 0055114 oxidation-reduction process; PDB: 3JTM_A 3NAQ_B 3N7U_J 3KB6_B 3GG9_A 1QP8_B 2CUK_C 2W2L_D 2W2K_A 1WWK_A ....
Probab=97.65 E-value=0.0001 Score=69.13 Aligned_cols=110 Identities=23% Similarity=0.309 Sum_probs=70.3
Q ss_pred cccCCcEEEEEccchhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHhcCcccccccccccCCCCccEEEEcCCCCCCCC
Q 010101 363 SPIAGKIFVLVGAGGAGRALAFGAKSRGARVIIFNRNYERAKALADAVSGEALHFEYLHEFFPEKGMILANASAIGMEPN 442 (518)
Q Consensus 363 ~~l~~k~vlvlGaGg~araia~~L~~~G~~v~i~nRt~~ka~~la~~~~~~~~~~~~l~~~~~~~~divInatp~g~~~~ 442 (518)
..+.|+++.|+|.|.+|++++..|...|++|+.++|+...... ....+....++++ ...++|+|+++.|.. +.
T Consensus 32 ~~l~g~tvgIiG~G~IG~~vA~~l~~fG~~V~~~d~~~~~~~~-~~~~~~~~~~l~e----ll~~aDiv~~~~plt--~~ 104 (178)
T PF02826_consen 32 RELRGKTVGIIGYGRIGRAVARRLKAFGMRVIGYDRSPKPEEG-ADEFGVEYVSLDE----LLAQADIVSLHLPLT--PE 104 (178)
T ss_dssp S-STTSEEEEESTSHHHHHHHHHHHHTT-EEEEEESSCHHHHH-HHHTTEEESSHHH----HHHH-SEEEE-SSSS--TT
T ss_pred cccCCCEEEEEEEcCCcCeEeeeeecCCceeEEecccCChhhh-cccccceeeehhh----hcchhhhhhhhhccc--cc
Confidence 5688999999999999999999999999999999999876542 2222222233333 345689999999964 22
Q ss_pred CCCCCCChhh---hcCCCEEEEEeeCCC-chHHHHHHHHCCC
Q 010101 443 SDQSPVPKEA---LKAYELVFDAVYTPR-NTRLLREAAEVGA 480 (518)
Q Consensus 443 ~~~~~~~~~~---l~~~~~v~Di~Y~P~-~T~ll~~A~~~G~ 480 (518)
..-.+..+. ++++.+++.+.-.+. +..=+.+|-+.|.
T Consensus 105 -T~~li~~~~l~~mk~ga~lvN~aRG~~vde~aL~~aL~~g~ 145 (178)
T PF02826_consen 105 -TRGLINAEFLAKMKPGAVLVNVARGELVDEDALLDALESGK 145 (178)
T ss_dssp -TTTSBSHHHHHTSTTTEEEEESSSGGGB-HHHHHHHHHTTS
T ss_pred -cceeeeeeeeeccccceEEEeccchhhhhhhHHHHHHhhcc
Confidence 223466554 466778877665543 2333344444444
No 88
>PRK14174 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=97.65 E-value=0.0011 Score=66.90 Aligned_cols=163 Identities=17% Similarity=0.216 Sum_probs=106.2
Q ss_pred HHHHHHHcCCCceEEeccc----CcHHHHHHHh-cCCCCCEEEecccchHHHHhcccccChhhhhcCceeEEEEeccCC-
Q 010101 256 HNPAFRHTRFNGIYVPMLV----DDVKEFFRTY-SGTDFAGFSVGIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDG- 329 (518)
Q Consensus 256 hn~~f~~~gl~~~y~~~~~----~~l~~~~~~l-~~~~~~G~~VT~P~K~~v~~~~d~~~~~A~~iGavNTi~~~~~~g- 329 (518)
-.+.++++|++.....++- +++.+.++.+ .++++.|+.|-.|... ++| +.. .+.+++--. + -||
T Consensus 52 k~k~~~~~Gi~~~~~~l~~~~~~~el~~~I~~lN~D~~V~GIlvq~Plp~----~id---~~~-i~~~I~p~K-D-VDGl 121 (295)
T PRK14174 52 KAKSCKEIGMNSTVIELPADTTEEHLLKKIEDLNNDPDVHGILVQQPLPK----QID---EFA-VTLAIDPAK-D-VDGF 121 (295)
T ss_pred HHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCCCCCCEEEEeCCCCC----CCC---HHH-HHhcCCccc-c-cccc
Confidence 3477899999988777764 2577777777 5778999999999752 222 111 111222211 0 011
Q ss_pred ------eE-EEe--e----cCHHHHHHHHHHHHHhhccCCCCCCCCcccCCcEEEEEccch-hHHHHHHHHHH----CCC
Q 010101 330 ------KL-VGY--N----TDCESAISAIEDALRERQGINGVASHTSPIAGKIFVLVGAGG-AGRALAFGAKS----RGA 391 (518)
Q Consensus 330 ------~l-~G~--N----TD~~G~~~~l~~~l~~~~~~~~~~~~~~~l~~k~vlvlGaGg-~araia~~L~~----~G~ 391 (518)
++ .|+ + ---.|++.-|+. .+ .+++||+++|+|.+. .||.++.-|.+ .|+
T Consensus 122 ~~~n~g~l~~~~~~~~~~PcTp~ail~ll~~-----y~--------i~l~Gk~vvViGrS~iVG~Pla~lL~~~~~~~~a 188 (295)
T PRK14174 122 HPENLGRLVMGHLDKCFVSCTPYGILELLGR-----YN--------IETKGKHCVVVGRSNIVGKPMANLMLQKLKESNC 188 (295)
T ss_pred ChhhHHHHhcCCCCCCcCCCCHHHHHHHHHH-----hC--------CCCCCCEEEEECCCCcchHHHHHHHHhccccCCC
Confidence 11 121 1 123455555443 12 678999999999986 99999999887 678
Q ss_pred eEEEEeCCHHHHHHHHHHhcCcccccccccccCCCCccEEEEcCCCCCCCCCCCCCCChhhhcCCCEEEEEeeCC
Q 010101 392 RVIIFNRNYERAKALADAVSGEALHFEYLHEFFPEKGMILANASAIGMEPNSDQSPVPKEALKAYELVFDAVYTP 466 (518)
Q Consensus 392 ~v~i~nRt~~ka~~la~~~~~~~~~~~~l~~~~~~~~divInatp~g~~~~~~~~~~~~~~l~~~~~v~Di~Y~P 466 (518)
.|+++..+....++ ...++|+||.|++. | ..+..++++++.+|+|+-.+.
T Consensus 189 tVt~~hs~t~~l~~------------------~~~~ADIvI~Avg~---~----~li~~~~vk~GavVIDVgi~~ 238 (295)
T PRK14174 189 TVTICHSATKDIPS------------------YTRQADILIAAIGK---A----RFITADMVKPGAVVIDVGINR 238 (295)
T ss_pred EEEEEeCCchhHHH------------------HHHhCCEEEEecCc---c----CccCHHHcCCCCEEEEeeccc
Confidence 99998876433221 23468999988842 2 237788999999999997765
No 89
>PRK14167 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=97.65 E-value=0.00071 Score=68.22 Aligned_cols=206 Identities=18% Similarity=0.237 Sum_probs=124.4
Q ss_pred HHHHHHHHcCCCceEEeccc----CcHHHHHHHh-cCCCCCEEEecccchHHH--HhcccccChhhhhcCceeEEEEecc
Q 010101 255 LHNPAFRHTRFNGIYVPMLV----DDVKEFFRTY-SGTDFAGFSVGIPHKEPA--VACCDEVHPLAKSIGAVNTIIRRPI 327 (518)
Q Consensus 255 ~hn~~f~~~gl~~~y~~~~~----~~l~~~~~~l-~~~~~~G~~VT~P~K~~v--~~~~d~~~~~A~~iGavNTi~~~~~ 327 (518)
.-.+.++++|++.....++- +++...++.+ .++++.|+.|-+|+...+ ...++.++|. |-+-..+..-
T Consensus 51 ~k~k~~~~~Gi~~~~~~l~~~~~~~el~~~I~~lN~D~~V~GIlvq~PLP~~i~~~~i~~~I~p~-KDVDGl~~~n---- 125 (297)
T PRK14167 51 MKQRDCEEVGIEAIDVEIDPDAPAEELYDTIDELNADEDVHGILVQMPVPDHVDDREVLRRIDPA-KDVDGFHPEN---- 125 (297)
T ss_pred HHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCCCCCCEEEEcCCCCCCCCHHHHHhccCcc-cCcccCChhh----
Confidence 33477899999988777764 2577777777 577899999999975322 1122111111 1111111110
Q ss_pred CCeE-EEee----cCHHHHHHHHHHHHHhhccCCCCCCCCcccCCcEEEEEccch-hHHHHHHHHHHC----CCeEEEEe
Q 010101 328 DGKL-VGYN----TDCESAISAIEDALRERQGINGVASHTSPIAGKIFVLVGAGG-AGRALAFGAKSR----GARVIIFN 397 (518)
Q Consensus 328 ~g~l-~G~N----TD~~G~~~~l~~~l~~~~~~~~~~~~~~~l~~k~vlvlGaGg-~araia~~L~~~----G~~v~i~n 397 (518)
-|++ .|.+ ---.|++.-|+. .+ .+++||+++|+|-+. .||.++.-|.+. ++.|+++.
T Consensus 126 ~g~l~~g~~~~~PcTp~avi~lL~~-----~~--------i~l~Gk~vvViGrS~iVGkPla~lL~~~~~~~~aTVtvch 192 (297)
T PRK14167 126 VGRLVAGDARFKPCTPHGIQKLLAA-----AG--------VDTEGADVVVVGRSDIVGKPMANLLIQKADGGNATVTVCH 192 (297)
T ss_pred hHHHhCCCCCCCCCCHHHHHHHHHH-----hC--------CCCCCCEEEEECCCcccHHHHHHHHhcCccCCCCEEEEeC
Confidence 0111 1111 124556665543 12 678999999999986 999999999887 67999986
Q ss_pred CCHHHHHHHHHHhcCcccccccccccCCCCccEEEEcCCCCCCCCCCCCCCChhhhcCCCEEEEEeeCCC-c-h------
Q 010101 398 RNYERAKALADAVSGEALHFEYLHEFFPEKGMILANASAIGMEPNSDQSPVPKEALKAYELVFDAVYTPR-N-T------ 469 (518)
Q Consensus 398 Rt~~ka~~la~~~~~~~~~~~~l~~~~~~~~divInatp~g~~~~~~~~~~~~~~l~~~~~v~Di~Y~P~-~-T------ 469 (518)
..... +.+ ...++||||.|+.. |. .+..++++++.+|+|+-.++. . |
T Consensus 193 s~T~~-----------------l~~-~~~~ADIvIsAvGk---p~----~i~~~~ik~gaiVIDvGin~~~~~~~~g~kl 247 (297)
T PRK14167 193 SRTDD-----------------LAA-KTRRADIVVAAAGV---PE----LIDGSMLSEGATVIDVGINRVDADTEKGYEL 247 (297)
T ss_pred CCCCC-----------------HHH-HHhhCCEEEEccCC---cC----ccCHHHcCCCCEEEEccccccCcccccCCce
Confidence 43221 111 23568999988753 22 477889999999999987652 1 1
Q ss_pred ----HHHHHHHH-CCC--eeeccHH-----HHHHHHHHHHHHhcCCC
Q 010101 470 ----RLLREAAE-VGA--TVVSGVE-----MFIRQALGQFRLFTGGL 504 (518)
Q Consensus 470 ----~ll~~A~~-~G~--~~i~G~~-----ml~~Qa~~qf~lw~g~~ 504 (518)
.| +.+++ .++ ++-.|.+ ||+.+.+.+++.-.+.+
T Consensus 248 ~GDVd~-e~v~~~a~~iTPVPGGVGpvT~a~L~~N~~~a~~~~~~~~ 293 (297)
T PRK14167 248 VGDVEF-ESAKEKASAITPVPGGVGPMTRAMLLYNTVKAASLQEGVD 293 (297)
T ss_pred eecCcH-HHHHhhceEecCCCCCchHHHHHHHHHHHHHHHHHhcCCC
Confidence 12 22322 232 2334544 88888888776655443
No 90
>COG0300 DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only]
Probab=97.63 E-value=0.00023 Score=70.64 Aligned_cols=78 Identities=23% Similarity=0.283 Sum_probs=60.4
Q ss_pred cCCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHhcCcc--------cccccccc------c---CCC
Q 010101 365 IAGKIFVLVGA-GGAGRALAFGAKSRGARVIIFNRNYERAKALADAVSGEA--------LHFEYLHE------F---FPE 426 (518)
Q Consensus 365 l~~k~vlvlGa-Gg~araia~~L~~~G~~v~i~nRt~~ka~~la~~~~~~~--------~~~~~l~~------~---~~~ 426 (518)
..+++++|.|| +|.|++++..|++.|++|.++.|+.+|.++|++++...+ +++.+.++ . ...
T Consensus 4 ~~~~~~lITGASsGIG~~~A~~lA~~g~~liLvaR~~~kL~~la~~l~~~~~v~v~vi~~DLs~~~~~~~l~~~l~~~~~ 83 (265)
T COG0300 4 MKGKTALITGASSGIGAELAKQLARRGYNLILVARREDKLEALAKELEDKTGVEVEVIPADLSDPEALERLEDELKERGG 83 (265)
T ss_pred CCCcEEEEECCCchHHHHHHHHHHHCCCEEEEEeCcHHHHHHHHHHHHHhhCceEEEEECcCCChhHHHHHHHHHHhcCC
Confidence 45789999999 799999999999999999999999999999999986432 12221111 0 113
Q ss_pred CccEEEEcCCCCCCCC
Q 010101 427 KGMILANASAIGMEPN 442 (518)
Q Consensus 427 ~~divInatp~g~~~~ 442 (518)
..|++||+...|....
T Consensus 84 ~IdvLVNNAG~g~~g~ 99 (265)
T COG0300 84 PIDVLVNNAGFGTFGP 99 (265)
T ss_pred cccEEEECCCcCCccc
Confidence 5799999998887653
No 91
>PRK06823 ornithine cyclodeaminase; Validated
Probab=97.61 E-value=0.00092 Score=68.52 Aligned_cols=95 Identities=12% Similarity=0.107 Sum_probs=68.0
Q ss_pred CcEEEEEccchhHHHHHHHHHHC-CC-eEEEEeCCHHHHHHHHHHhcCc---ccccccccccCCCCccEEEEcCCCCCCC
Q 010101 367 GKIFVLVGAGGAGRALAFGAKSR-GA-RVIIFNRNYERAKALADAVSGE---ALHFEYLHEFFPEKGMILANASAIGMEP 441 (518)
Q Consensus 367 ~k~vlvlGaGg~araia~~L~~~-G~-~v~i~nRt~~ka~~la~~~~~~---~~~~~~l~~~~~~~~divInatp~g~~~ 441 (518)
-+++.|+|+|..|+.-+.++... .. +|+|+||++++++++++.+... ....++.++ ...++|||+-||+.. .|
T Consensus 128 ~~~l~iiG~G~qA~~~~~a~~~v~~i~~v~v~~r~~~~a~~~~~~~~~~~~~v~~~~~~~~-av~~ADIV~taT~s~-~P 205 (315)
T PRK06823 128 VSAIGIVGTGIQARMQLMYLKNVTDCRQLWVWGRSETALEEYRQYAQALGFAVNTTLDAAE-VAHAANLIVTTTPSR-EP 205 (315)
T ss_pred CCEEEEECCcHHHHHHHHHHHhcCCCCEEEEECCCHHHHHHHHHHHHhcCCcEEEECCHHH-HhcCCCEEEEecCCC-Cc
Confidence 47899999999999999988754 45 8999999999999998776422 111233334 567899999999754 23
Q ss_pred CCCCCCCChhhhcCCCEEEEE-eeCCCc
Q 010101 442 NSDQSPVPKEALKAYELVFDA-VYTPRN 468 (518)
Q Consensus 442 ~~~~~~~~~~~l~~~~~v~Di-~Y~P~~ 468 (518)
. +..++++++..|.=+ .|.|..
T Consensus 206 ~-----~~~~~l~~G~hi~~iGs~~p~~ 228 (315)
T PRK06823 206 L-----LQAEDIQPGTHITAVGADSPGK 228 (315)
T ss_pred e-----eCHHHcCCCcEEEecCCCCccc
Confidence 2 566788887665444 344543
No 92
>KOG0409 consensus Predicted dehydrogenase [General function prediction only]
Probab=97.61 E-value=0.00014 Score=72.35 Aligned_cols=113 Identities=14% Similarity=0.221 Sum_probs=74.6
Q ss_pred CCcEEEEEccchhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHhcCcccccccccccCCCCccEEEEcCCCCCCCCCCC
Q 010101 366 AGKIFVLVGAGGAGRALAFGAKSRGARVIIFNRNYERAKALADAVSGEALHFEYLHEFFPEKGMILANASAIGMEPNSDQ 445 (518)
Q Consensus 366 ~~k~vlvlGaGg~araia~~L~~~G~~v~i~nRt~~ka~~la~~~~~~~~~~~~l~~~~~~~~divInatp~g~~~~~~~ 445 (518)
..+++-+||-|-||.+++.+|.+.|++|+|+||+.++.+.+.+.-....-+..++ .+.+|+||-..|- ..+...
T Consensus 34 s~~~iGFIGLG~MG~~M~~nLik~G~kVtV~dr~~~k~~~f~~~Ga~v~~sPaeV----ae~sDvvitmv~~--~~~v~~ 107 (327)
T KOG0409|consen 34 SKTRIGFIGLGNMGSAMVSNLIKAGYKVTVYDRTKDKCKEFQEAGARVANSPAEV----AEDSDVVITMVPN--PKDVKD 107 (327)
T ss_pred ccceeeEEeeccchHHHHHHHHHcCCEEEEEeCcHHHHHHHHHhchhhhCCHHHH----HhhcCEEEEEcCC--hHhhHH
Confidence 3578999999999999999999999999999999999999876532222222232 3468999955542 221111
Q ss_pred CCCChh-h---hcCCCEE-EEEeeC-CC-chHHHHHHHHCCCeeec
Q 010101 446 SPVPKE-A---LKAYELV-FDAVYT-PR-NTRLLREAAEVGATVVS 484 (518)
Q Consensus 446 ~~~~~~-~---l~~~~~v-~Di~Y~-P~-~T~ll~~A~~~G~~~i~ 484 (518)
..+... . +.+.... +|+... |. .+.+-++++.+|++.++
T Consensus 108 v~~g~~Gvl~g~~~g~~~~vDmSTidp~~s~ei~~~i~~~~~~~vD 153 (327)
T KOG0409|consen 108 VLLGKSGVLSGIRPGKKATVDMSTIDPDTSLEIAKAISNKGGRFVD 153 (327)
T ss_pred HhcCCCcceeeccCCCceEEeccccCHHHHHHHHHHHHhCCCeEEe
Confidence 111111 1 2344444 799886 44 35566677778887654
No 93
>cd05291 HicDH_like L-2-hydroxyisocapronate dehydrogenases and some bacterial L-lactate dehydrogenases. L-2-hydroxyisocapronate dehydrogenase (HicDH) catalyzes the conversion of a variety of 2-oxo carboxylic acids with medium-sized aliphatic or aromatic side chains. This subfamily is composed of HicDHs and some bacterial L-lactate dehydrogenases (LDH). LDHs catalyze the last step of glycolysis in which pyruvate is converted to L-lactate. Bacterial LDHs can be non-allosteric or may be activated by an allosteric effector such as fructose-1,6-bisphosphate. Members of this subfamily with known structures such as the HicDH of Lactobacillus confusus, the non-allosteric LDH of Lactobacillus pentosus, and the allosteric LDH of Bacillus stearothermophilus, show that they exist as homotetramers. The HicDH-like subfamily is part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine
Probab=97.60 E-value=0.00016 Score=73.83 Aligned_cols=72 Identities=18% Similarity=0.294 Sum_probs=55.0
Q ss_pred cEEEEEccchhHHHHHHHHHHCCC--eEEEEeCCHHHHHHHHHHhcCcc--------cccccccccCCCCccEEEEcCCC
Q 010101 368 KIFVLVGAGGAGRALAFGAKSRGA--RVIIFNRNYERAKALADAVSGEA--------LHFEYLHEFFPEKGMILANASAI 437 (518)
Q Consensus 368 k~vlvlGaGg~araia~~L~~~G~--~v~i~nRt~~ka~~la~~~~~~~--------~~~~~l~~~~~~~~divInatp~ 437 (518)
+++.|+|+|++|++++++|+..|. +|++++|+.++++.++.++.... +...+.+ ...++|+||+|++.
T Consensus 1 ~kI~IIGaG~vG~~~a~~l~~~g~~~ei~l~D~~~~~~~~~a~dL~~~~~~~~~~~~i~~~~~~--~l~~aDIVIitag~ 78 (306)
T cd05291 1 RKVVIIGAGHVGSSFAYSLVNQGIADELVLIDINEEKAEGEALDLEDALAFLPSPVKIKAGDYS--DCKDADIVVITAGA 78 (306)
T ss_pred CEEEEECCCHHHHHHHHHHHhcCCCCEEEEEeCCcchhhHhHhhHHHHhhccCCCeEEEcCCHH--HhCCCCEEEEccCC
Confidence 379999999999999999999995 89999999999999988773210 1111111 34679999999976
Q ss_pred CCCC
Q 010101 438 GMEP 441 (518)
Q Consensus 438 g~~~ 441 (518)
.-.|
T Consensus 79 ~~~~ 82 (306)
T cd05291 79 PQKP 82 (306)
T ss_pred CCCC
Confidence 5444
No 94
>PRK00141 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=97.57 E-value=0.00047 Score=74.76 Aligned_cols=48 Identities=21% Similarity=0.283 Sum_probs=40.2
Q ss_pred ccCCcEEEEEccchhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHhc
Q 010101 364 PIAGKIFVLVGAGGAGRALAFGAKSRGARVIIFNRNYERAKALADAVS 411 (518)
Q Consensus 364 ~l~~k~vlvlGaGg~araia~~L~~~G~~v~i~nRt~~ka~~la~~~~ 411 (518)
.+.+++++|+|.||+|++++..|.+.|++|++++|+..+..++.+.+|
T Consensus 12 ~~~~~~v~v~G~G~sG~a~a~~L~~~G~~V~~~D~~~~~~~~~l~~~g 59 (473)
T PRK00141 12 QELSGRVLVAGAGVSGRGIAAMLSELGCDVVVADDNETARHKLIEVTG 59 (473)
T ss_pred cccCCeEEEEccCHHHHHHHHHHHHCCCEEEEECCChHHHHHHHHhcC
Confidence 467899999999999999999999999999999998766554444433
No 95
>cd05212 NAD_bind_m-THF_DH_Cyclohyd_like NAD(P) binding domain of methylene-tetrahydrofolate dehydrogenase and methylene-tetrahydrofolate dehydrogenase/cyclohydrolase. NAD(P) binding domains of methylene-tetrahydrofolate dehydrogenase (m-THF DH) and m-THF DH/cyclohydrolase bifunctional enzymes (m-THF DH/cyclohydrolase). M-THF is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional
Probab=97.56 E-value=0.00068 Score=61.03 Aligned_cols=79 Identities=22% Similarity=0.222 Sum_probs=62.1
Q ss_pred cccCCcEEEEEccch-hHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHhcCcccccccccccCCCCccEEEEcCCCCCCC
Q 010101 363 SPIAGKIFVLVGAGG-AGRALAFGAKSRGARVIIFNRNYERAKALADAVSGEALHFEYLHEFFPEKGMILANASAIGMEP 441 (518)
Q Consensus 363 ~~l~~k~vlvlGaGg-~araia~~L~~~G~~v~i~nRt~~ka~~la~~~~~~~~~~~~l~~~~~~~~divInatp~g~~~ 441 (518)
.+++||+++|+|-+. .|+.++..|.+.|+.|++++++-...+ + ...++|+||.+|+.. +
T Consensus 24 ~~~~gk~v~VvGrs~~vG~pla~lL~~~gatV~~~~~~t~~l~-----------------~-~v~~ADIVvsAtg~~--~ 83 (140)
T cd05212 24 VRLDGKKVLVVGRSGIVGAPLQCLLQRDGATVYSCDWKTIQLQ-----------------S-KVHDADVVVVGSPKP--E 83 (140)
T ss_pred CCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEeCCCCcCHH-----------------H-HHhhCCEEEEecCCC--C
Confidence 678999999999976 999999999999999999996532211 1 345689999998642 2
Q ss_pred CCCCCCCChhhhcCCCEEEEEeeCC
Q 010101 442 NSDQSPVPKEALKAYELVFDAVYTP 466 (518)
Q Consensus 442 ~~~~~~~~~~~l~~~~~v~Di~Y~P 466 (518)
.+..++++++.+|+|+-.+.
T Consensus 84 -----~i~~~~ikpGa~Vidvg~~~ 103 (140)
T cd05212 84 -----KVPTEWIKPGATVINCSPTK 103 (140)
T ss_pred -----ccCHHHcCCCCEEEEcCCCc
Confidence 37889999999999876554
No 96
>TIGR02371 ala_DH_arch alanine dehydrogenase, Archaeoglobus fulgidus type. This enzyme, a homolog of bacterial ornithine cyclodeaminases and marsupial mu-crystallins, is a homodimeric, NAD-dependent alanine dehydrogenase found in Archaeoglobus fulgidus and several other Archaea. For a number of close homologs, scoring between trusted and noise cutoffs, it is not clear at present what is the enzymatic activity.
Probab=97.55 E-value=0.00037 Score=71.85 Aligned_cols=94 Identities=15% Similarity=0.097 Sum_probs=66.8
Q ss_pred CcEEEEEccchhHHHHHHHHHHC-CC-eEEEEeCCHHHHHHHHHHhcC---cccccccccccCCCCccEEEEcCCCCCCC
Q 010101 367 GKIFVLVGAGGAGRALAFGAKSR-GA-RVIIFNRNYERAKALADAVSG---EALHFEYLHEFFPEKGMILANASAIGMEP 441 (518)
Q Consensus 367 ~k~vlvlGaGg~araia~~L~~~-G~-~v~i~nRt~~ka~~la~~~~~---~~~~~~~l~~~~~~~~divInatp~g~~~ 441 (518)
.+++.|||+|.+|++-+.++... .. +|+|+||+.++++++++++.. ......+..+ ...++|+||-|||.. .|
T Consensus 128 ~~~lgiiG~G~qA~~~l~al~~~~~~~~v~V~~r~~~~~~~~~~~~~~~g~~v~~~~~~~e-av~~aDiVitaT~s~-~P 205 (325)
T TIGR02371 128 SSVLGIIGAGRQAWTQLEALSRVFDLEEVSVYCRTPSTREKFALRASDYEVPVRAATDPRE-AVEGCDILVTTTPSR-KP 205 (325)
T ss_pred CCEEEEECCCHHHHHHHHHHHhcCCCCEEEEECCCHHHHHHHHHHHHhhCCcEEEeCCHHH-HhccCCEEEEecCCC-Cc
Confidence 47899999999999988777643 45 899999999999999887642 1112233333 457899999999753 23
Q ss_pred CCCCCCCChhhhcCCCEEEEE-eeCCC
Q 010101 442 NSDQSPVPKEALKAYELVFDA-VYTPR 467 (518)
Q Consensus 442 ~~~~~~~~~~~l~~~~~v~Di-~Y~P~ 467 (518)
. +..++++++..|.=+ .|.|.
T Consensus 206 ~-----~~~~~l~~g~~v~~vGs~~p~ 227 (325)
T TIGR02371 206 V-----VKADWVSEGTHINAIGADAPG 227 (325)
T ss_pred E-----ecHHHcCCCCEEEecCCCCcc
Confidence 2 456788887766555 34454
No 97
>PTZ00075 Adenosylhomocysteinase; Provisional
Probab=97.55 E-value=0.00051 Score=73.40 Aligned_cols=91 Identities=24% Similarity=0.222 Sum_probs=67.1
Q ss_pred cccCCcEEEEEccchhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHhcCcccccccccccCCCCccEEEEcCCCCCCCC
Q 010101 363 SPIAGKIFVLVGAGGAGRALAFGAKSRGARVIIFNRNYERAKALADAVSGEALHFEYLHEFFPEKGMILANASAIGMEPN 442 (518)
Q Consensus 363 ~~l~~k~vlvlGaGg~araia~~L~~~G~~v~i~nRt~~ka~~la~~~~~~~~~~~~l~~~~~~~~divInatp~g~~~~ 442 (518)
..+.||+++|+|.|.+|++++..|...|++|+++++++.++.... ..+....++++ .+..+|+||.+|. ...
T Consensus 250 ~~LaGKtVgVIG~G~IGr~vA~rL~a~Ga~ViV~e~dp~~a~~A~-~~G~~~~~lee----ll~~ADIVI~atG--t~~- 321 (476)
T PTZ00075 250 VMIAGKTVVVCGYGDVGKGCAQALRGFGARVVVTEIDPICALQAA-MEGYQVVTLED----VVETADIFVTATG--NKD- 321 (476)
T ss_pred CCcCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCchhHHHHH-hcCceeccHHH----HHhcCCEEEECCC--ccc-
Confidence 578999999999999999999999999999999999988764432 23544444443 3457899998873 211
Q ss_pred CCCCCCChhh---hcCCCEEEEEeeC
Q 010101 443 SDQSPVPKEA---LKAYELVFDAVYT 465 (518)
Q Consensus 443 ~~~~~~~~~~---l~~~~~v~Di~Y~ 465 (518)
.+..+. ++++.+++++.-.
T Consensus 322 ----iI~~e~~~~MKpGAiLINvGr~ 343 (476)
T PTZ00075 322 ----IITLEHMRRMKNNAIVGNIGHF 343 (476)
T ss_pred ----ccCHHHHhccCCCcEEEEcCCC
Confidence 244433 4778888888665
No 98
>PRK09599 6-phosphogluconate dehydrogenase-like protein; Reviewed
Probab=97.55 E-value=0.00015 Score=73.93 Aligned_cols=111 Identities=21% Similarity=0.205 Sum_probs=74.2
Q ss_pred EEEEEccchhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHhcCccc-ccccccccCCCCccEEEEcCCCCCCCCCCCCC
Q 010101 369 IFVLVGAGGAGRALAFGAKSRGARVIIFNRNYERAKALADAVSGEAL-HFEYLHEFFPEKGMILANASAIGMEPNSDQSP 447 (518)
Q Consensus 369 ~vlvlGaGg~araia~~L~~~G~~v~i~nRt~~ka~~la~~~~~~~~-~~~~l~~~~~~~~divInatp~g~~~~~~~~~ 447 (518)
++.|||.|-||.+++..|.+.|.+|+++||++++++++.+ .+.... +.+++.+ ...++|+||.+.|.+.. ... .
T Consensus 2 ~Ig~IGlG~MG~~mA~~L~~~g~~v~v~dr~~~~~~~~~~-~g~~~~~~~~e~~~-~~~~~dvvi~~v~~~~~--~~~-v 76 (301)
T PRK09599 2 QLGMIGLGRMGGNMARRLLRGGHEVVGYDRNPEAVEALAE-EGATGADSLEELVA-KLPAPRVVWLMVPAGEI--TDA-T 76 (301)
T ss_pred EEEEEcccHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHH-CCCeecCCHHHHHh-hcCCCCEEEEEecCCcH--HHH-H
Confidence 5899999999999999999999999999999999988865 343221 2333222 12246899988875411 000 0
Q ss_pred CC--hhhhcCCCEEEEEeeC-CCchH-HHHHHHHCCCeeec
Q 010101 448 VP--KEALKAYELVFDAVYT-PRNTR-LLREAAEVGATVVS 484 (518)
Q Consensus 448 ~~--~~~l~~~~~v~Di~Y~-P~~T~-ll~~A~~~G~~~i~ 484 (518)
+. ...++++.+++|+.-. |..|. +.+.++++|+.+++
T Consensus 77 ~~~l~~~l~~g~ivid~st~~~~~~~~~~~~~~~~g~~~~d 117 (301)
T PRK09599 77 IDELAPLLSPGDIVIDGGNSYYKDDIRRAELLAEKGIHFVD 117 (301)
T ss_pred HHHHHhhCCCCCEEEeCCCCChhHHHHHHHHHHHcCCEEEe
Confidence 11 1235667899999654 55443 55677788887654
No 99
>PRK07502 cyclohexadienyl dehydrogenase; Validated
Probab=97.54 E-value=0.00011 Score=75.09 Aligned_cols=117 Identities=15% Similarity=0.133 Sum_probs=75.2
Q ss_pred CcEEEEEccchhHHHHHHHHHHCCC--eEEEEeCCHHHHHHHHHHhcCcccccccccccCCCCccEEEEcCCCCCCCCCC
Q 010101 367 GKIFVLVGAGGAGRALAFGAKSRGA--RVIIFNRNYERAKALADAVSGEALHFEYLHEFFPEKGMILANASAIGMEPNSD 444 (518)
Q Consensus 367 ~k~vlvlGaGg~araia~~L~~~G~--~v~i~nRt~~ka~~la~~~~~~~~~~~~l~~~~~~~~divInatp~g~~~~~~ 444 (518)
.+++.|||+|.+|.+++..|.+.|. +|++++|++++.+.+. ..+.......+..+ ...++|+||.|+|.+.....-
T Consensus 6 ~~~I~IIG~G~mG~sla~~l~~~g~~~~V~~~dr~~~~~~~a~-~~g~~~~~~~~~~~-~~~~aDvViiavp~~~~~~v~ 83 (307)
T PRK07502 6 FDRVALIGIGLIGSSLARAIRRLGLAGEIVGADRSAETRARAR-ELGLGDRVTTSAAE-AVKGADLVILCVPVGASGAVA 83 (307)
T ss_pred CcEEEEEeeCHHHHHHHHHHHhcCCCcEEEEEECCHHHHHHHH-hCCCCceecCCHHH-HhcCCCEEEECCCHHHHHHHH
Confidence 3689999999999999999999885 8999999998776543 34421111122222 346789999999975421100
Q ss_pred CCCCChhhhcCCCEEEEEeeCCCchHHHHHHHH---CCCeeeccHHHH
Q 010101 445 QSPVPKEALKAYELVFDAVYTPRNTRLLREAAE---VGATVVSGVEMF 489 (518)
Q Consensus 445 ~~~~~~~~l~~~~~v~Di~Y~P~~T~ll~~A~~---~G~~~i~G~~ml 489 (518)
. .+ ...++++.+|+|+... ....++...+ .+++++++..|.
T Consensus 84 ~-~l-~~~l~~~~iv~dvgs~--k~~~~~~~~~~~~~~~~~v~~hPm~ 127 (307)
T PRK07502 84 A-EI-APHLKPGAIVTDVGSV--KASVIAAMAPHLPEGVHFIPGHPLA 127 (307)
T ss_pred H-HH-HhhCCCCCEEEeCccc--hHHHHHHHHHhCCCCCeEEeCCCCC
Confidence 0 01 1235667889998554 2344454433 356777776665
No 100
>PRK15461 NADH-dependent gamma-hydroxybutyrate dehydrogenase; Provisional
Probab=97.53 E-value=0.0002 Score=72.76 Aligned_cols=107 Identities=17% Similarity=0.186 Sum_probs=72.1
Q ss_pred EEEEEccchhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHhcCcccccccccccCCCCccEEEEcCCCCCCCCCCCCCC
Q 010101 369 IFVLVGAGGAGRALAFGAKSRGARVIIFNRNYERAKALADAVSGEALHFEYLHEFFPEKGMILANASAIGMEPNSDQSPV 448 (518)
Q Consensus 369 ~vlvlGaGg~araia~~L~~~G~~v~i~nRt~~ka~~la~~~~~~~~~~~~l~~~~~~~~divInatp~g~~~~~~~~~~ 448 (518)
++.|||.|-||.+++..|.+.|.+|+++||++++++++.+. +... ..+..+ ...++|+||-++|.... ......
T Consensus 3 ~Ig~IGlG~mG~~mA~~l~~~G~~V~v~d~~~~~~~~~~~~-g~~~--~~s~~~-~~~~aDvVi~~vp~~~~--~~~vl~ 76 (296)
T PRK15461 3 AIAFIGLGQMGSPMASNLLKQGHQLQVFDVNPQAVDALVDK-GATP--AASPAQ-AAAGAEFVITMLPNGDL--VRSVLF 76 (296)
T ss_pred eEEEEeeCHHHHHHHHHHHHCCCeEEEEcCCHHHHHHHHHc-CCcc--cCCHHH-HHhcCCEEEEecCCHHH--HHHHHc
Confidence 68999999999999999999999999999999999888654 2211 111122 24568999999885421 000000
Q ss_pred -C---hhhhcCCCEEEEEeeCCCc--hHHHHHHHHCCCe
Q 010101 449 -P---KEALKAYELVFDAVYTPRN--TRLLREAAEVGAT 481 (518)
Q Consensus 449 -~---~~~l~~~~~v~Di~Y~P~~--T~ll~~A~~~G~~ 481 (518)
. ...++++.+++|+...+.. ..+.+..+++|+.
T Consensus 77 ~~~~i~~~l~~g~lvid~sT~~p~~~~~l~~~l~~~g~~ 115 (296)
T PRK15461 77 GENGVCEGLSRDALVIDMSTIHPLQTDKLIADMQAKGFS 115 (296)
T ss_pred CcccHhhcCCCCCEEEECCCCCHHHHHHHHHHHHHcCCc
Confidence 0 1124567899999877443 3445666777755
No 101
>TIGR01505 tartro_sem_red 2-hydroxy-3-oxopropionate reductase. This model represents 2-hydroxy-3-oxopropionate reductase (EC 1.1.1.60), also called tartronate semialdehyde reductase. It follows glyoxylate carboligase and precedes glycerate kinase in D-glycerate pathway of glyoxylate degradation. The eventual product, 3-phosphoglycerate, is an intermediate of glycolysis and is readily metabolized. Tartronic semialdehyde, the substrate of this enzyme, may also come from other pathways, such as D-glucarate catabolism.
Probab=97.53 E-value=0.00014 Score=73.63 Aligned_cols=111 Identities=14% Similarity=0.149 Sum_probs=74.4
Q ss_pred EEEEEccchhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHhcCcccccccccccCCCCccEEEEcCCCCCCCCCCCCCC
Q 010101 369 IFVLVGAGGAGRALAFGAKSRGARVIIFNRNYERAKALADAVSGEALHFEYLHEFFPEKGMILANASAIGMEPNSDQSPV 448 (518)
Q Consensus 369 ~vlvlGaGg~araia~~L~~~G~~v~i~nRt~~ka~~la~~~~~~~~~~~~l~~~~~~~~divInatp~g~~~~~~~~~~ 448 (518)
++.|||.|-+|.+++..|.+.|.+|+++||++++++.+.+. +... ..+..+ ...++|+||.+.|... ......+
T Consensus 1 ~IgvIG~G~mG~~iA~~l~~~G~~V~~~dr~~~~~~~~~~~-g~~~--~~~~~~-~~~~aDivi~~vp~~~--~~~~v~~ 74 (291)
T TIGR01505 1 KVGFIGLGIMGSPMSINLAKAGYQLHVTTIGPEVADELLAA-GAVT--AETARQ-VTEQADVIFTMVPDSP--QVEEVAF 74 (291)
T ss_pred CEEEEEecHHHHHHHHHHHHCCCeEEEEcCCHHHHHHHHHC-CCcc--cCCHHH-HHhcCCEEEEecCCHH--HHHHHHc
Confidence 37899999999999999999999999999999998887653 3211 112222 3456899999987531 1111101
Q ss_pred C-h---hhhcCCCEEEEEeeCCCch--HHHHHHHHCCCeeecc
Q 010101 449 P-K---EALKAYELVFDAVYTPRNT--RLLREAAEVGATVVSG 485 (518)
Q Consensus 449 ~-~---~~l~~~~~v~Di~Y~P~~T--~ll~~A~~~G~~~i~G 485 (518)
. . ..+.++.+++|+...+..+ .+.+..+++|..++++
T Consensus 75 ~~~~~~~~~~~g~iivd~st~~~~~~~~l~~~l~~~g~~~~~~ 117 (291)
T TIGR01505 75 GENGIIEGAKPGKTLVDMSSISPIESKRFAKAVKEKGIDYLDA 117 (291)
T ss_pred CcchHhhcCCCCCEEEECCCCCHHHHHHHHHHHHHcCCCEEec
Confidence 1 1 1235678899987765432 4666777788776663
No 102
>PLN02928 oxidoreductase family protein
Probab=97.52 E-value=0.00023 Score=73.99 Aligned_cols=74 Identities=20% Similarity=0.297 Sum_probs=51.4
Q ss_pred ccCCcEEEEEccchhHHHHHHHHHHCCCeEEEEeCCHHHHHHHH--------HHhcCcccccccccccCCCCccEEEEcC
Q 010101 364 PIAGKIFVLVGAGGAGRALAFGAKSRGARVIIFNRNYERAKALA--------DAVSGEALHFEYLHEFFPEKGMILANAS 435 (518)
Q Consensus 364 ~l~~k~vlvlGaGg~araia~~L~~~G~~v~i~nRt~~ka~~la--------~~~~~~~~~~~~l~~~~~~~~divInat 435 (518)
.+.||++.|+|.|.+|+.++..|...|++|+.++|+..+..... +.+........++.+ .+.++|+|++++
T Consensus 156 ~l~gktvGIiG~G~IG~~vA~~l~afG~~V~~~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~e-ll~~aDiVvl~l 234 (347)
T PLN02928 156 TLFGKTVFILGYGAIGIELAKRLRPFGVKLLATRRSWTSEPEDGLLIPNGDVDDLVDEKGGHEDIYE-FAGEADIVVLCC 234 (347)
T ss_pred CCCCCEEEEECCCHHHHHHHHHHhhCCCEEEEECCCCChhhhhhhccccccccccccccCcccCHHH-HHhhCCEEEECC
Confidence 47799999999999999999999999999999999843321110 000001112334444 456789999998
Q ss_pred CCC
Q 010101 436 AIG 438 (518)
Q Consensus 436 p~g 438 (518)
|..
T Consensus 235 Plt 237 (347)
T PLN02928 235 TLT 237 (347)
T ss_pred CCC
Confidence 853
No 103
>TIGR02356 adenyl_thiF thiazole biosynthesis adenylyltransferase ThiF, E. coli subfamily. Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with the Escherichia. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the more widely distributed clade of ThiF proteins such found in E. coli.
Probab=97.50 E-value=0.00015 Score=69.46 Aligned_cols=70 Identities=16% Similarity=0.311 Sum_probs=52.5
Q ss_pred cCCcEEEEEccchhHHHHHHHHHHCCC-eEEEEeCC-------------------HHHHHHHHHHhcCc--cccc-----
Q 010101 365 IAGKIFVLVGAGGAGRALAFGAKSRGA-RVIIFNRN-------------------YERAKALADAVSGE--ALHF----- 417 (518)
Q Consensus 365 l~~k~vlvlGaGg~araia~~L~~~G~-~v~i~nRt-------------------~~ka~~la~~~~~~--~~~~----- 417 (518)
+.+++|+|+|+||.|..++..|+..|+ ++++++++ ..|++.+++.+..- .+.+
T Consensus 19 l~~~~VlviG~GglGs~ia~~La~~Gv~~i~lvD~d~ve~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~v~i~~~~~ 98 (202)
T TIGR02356 19 LLNSHVLIIGAGGLGSPAALYLAGAGVGTIVIVDDDHVDLSNLQRQILFTEEDVGRPKVEVAAQRLRELNSDIQVTALKE 98 (202)
T ss_pred hcCCCEEEECCCHHHHHHHHHHHHcCCCeEEEecCCEEcccchhhhhccChhhCCChHHHHHHHHHHHhCCCCEEEEehh
Confidence 567899999999999999999999999 99999988 46777777766421 1111
Q ss_pred ----ccccccCCCCccEEEEcC
Q 010101 418 ----EYLHEFFPEKGMILANAS 435 (518)
Q Consensus 418 ----~~l~~~~~~~~divInat 435 (518)
+++.+ ...++|+||+|+
T Consensus 99 ~i~~~~~~~-~~~~~D~Vi~~~ 119 (202)
T TIGR02356 99 RVTAENLEL-LINNVDLVLDCT 119 (202)
T ss_pred cCCHHHHHH-HHhCCCEEEECC
Confidence 11222 346789999987
No 104
>PRK06718 precorrin-2 dehydrogenase; Reviewed
Probab=97.49 E-value=0.00026 Score=67.90 Aligned_cols=71 Identities=14% Similarity=0.216 Sum_probs=51.4
Q ss_pred cccCCcEEEEEccchhHHHHHHHHHHCCCeEEEEeCCHH-HHHHHHHHhcCcccccc--cccccCCCCccEEEEcCC
Q 010101 363 SPIAGKIFVLVGAGGAGRALAFGAKSRGARVIIFNRNYE-RAKALADAVSGEALHFE--YLHEFFPEKGMILANASA 436 (518)
Q Consensus 363 ~~l~~k~vlvlGaGg~araia~~L~~~G~~v~i~nRt~~-ka~~la~~~~~~~~~~~--~l~~~~~~~~divInatp 436 (518)
.+++|++++|+|+|.+|...+..|.+.|++|+|++++.. ..+++++... +.+. .+....+.++|+||.||.
T Consensus 6 l~l~~k~vLVIGgG~va~~ka~~Ll~~ga~V~VIs~~~~~~l~~l~~~~~---i~~~~~~~~~~~l~~adlViaaT~ 79 (202)
T PRK06718 6 IDLSNKRVVIVGGGKVAGRRAITLLKYGAHIVVISPELTENLVKLVEEGK---IRWKQKEFEPSDIVDAFLVIAATN 79 (202)
T ss_pred EEcCCCEEEEECCCHHHHHHHHHHHHCCCeEEEEcCCCCHHHHHHHhCCC---EEEEecCCChhhcCCceEEEEcCC
Confidence 467899999999999999999999999999999998763 3455554311 1221 111113567899998885
No 105
>PRK12490 6-phosphogluconate dehydrogenase-like protein; Reviewed
Probab=97.47 E-value=0.00019 Score=73.13 Aligned_cols=111 Identities=21% Similarity=0.200 Sum_probs=71.9
Q ss_pred EEEEEccchhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHhcCcc-cccccccccCCCCccEEEEcCCCCCCCCCCCCC
Q 010101 369 IFVLVGAGGAGRALAFGAKSRGARVIIFNRNYERAKALADAVSGEA-LHFEYLHEFFPEKGMILANASAIGMEPNSDQSP 447 (518)
Q Consensus 369 ~vlvlGaGg~araia~~L~~~G~~v~i~nRt~~ka~~la~~~~~~~-~~~~~l~~~~~~~~divInatp~g~~~~~~~~~ 447 (518)
++.|||.|-+|.+++..|.+.|.+|+++||++++++++.+ .+... .+.+++.+ ...++|+||-++|..- .... .
T Consensus 2 ~Ig~IGlG~mG~~mA~~L~~~g~~v~v~dr~~~~~~~~~~-~g~~~~~s~~~~~~-~~~~advVi~~vp~~~--~~~~-v 76 (299)
T PRK12490 2 KLGLIGLGKMGGNMAERLREDGHEVVGYDVNQEAVDVAGK-LGITARHSLEELVS-KLEAPRTIWVMVPAGE--VTES-V 76 (299)
T ss_pred EEEEEcccHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHH-CCCeecCCHHHHHH-hCCCCCEEEEEecCch--HHHH-H
Confidence 5889999999999999999999999999999999988754 34322 12333221 1223689998888541 0000 0
Q ss_pred CCh--hhhcCCCEEEEEeeC-CCc-hHHHHHHHHCCCeeec
Q 010101 448 VPK--EALKAYELVFDAVYT-PRN-TRLLREAAEVGATVVS 484 (518)
Q Consensus 448 ~~~--~~l~~~~~v~Di~Y~-P~~-T~ll~~A~~~G~~~i~ 484 (518)
+.. ..++++.+++|+... |.. -.+.++++++|+.+++
T Consensus 77 ~~~i~~~l~~g~ivid~st~~~~~~~~~~~~~~~~g~~~vd 117 (299)
T PRK12490 77 IKDLYPLLSPGDIVVDGGNSRYKDDLRRAEELAERGIHYVD 117 (299)
T ss_pred HHHHhccCCCCCEEEECCCCCchhHHHHHHHHHHcCCeEEe
Confidence 111 124667899999654 543 3344555667776554
No 106
>PF07991 IlvN: Acetohydroxy acid isomeroreductase, catalytic domain; InterPro: IPR013116 Acetohydroxy acid isomeroreductase catalyses the conversion of acetohydroxy acids into dihydroxy valerates. This reaction is the second in the synthetic pathway of the essential branched side chain amino acids valine and isoleucine.; GO: 0004455 ketol-acid reductoisomerase activity, 0008652 cellular amino acid biosynthetic process, 0055114 oxidation-reduction process; PDB: 1QMG_A 1YVE_J 3FR8_B 3FR7_A 1NP3_C 1YRL_C.
Probab=97.46 E-value=0.00017 Score=65.94 Aligned_cols=69 Identities=22% Similarity=0.208 Sum_probs=52.7
Q ss_pred cCCcEEEEEccchhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHhcCcccccccccccCCCCccEEEEcCCC
Q 010101 365 IAGKIFVLVGAGGAGRALAFGAKSRGARVIIFNRNYERAKALADAVSGEALHFEYLHEFFPEKGMILANASAI 437 (518)
Q Consensus 365 l~~k~vlvlGaGg~araia~~L~~~G~~v~i~nRt~~ka~~la~~~~~~~~~~~~l~~~~~~~~divInatp~ 437 (518)
+++|++.|||.|.-|++-+..|.+.|++|.|..|..++..+.|+.-|.+..++++ ...++|+|+..+|-
T Consensus 2 l~~k~IAViGyGsQG~a~AlNLrDSG~~V~Vglr~~s~s~~~A~~~Gf~v~~~~e----Av~~aDvV~~L~PD 70 (165)
T PF07991_consen 2 LKGKTIAVIGYGSQGHAHALNLRDSGVNVIVGLREGSASWEKAKADGFEVMSVAE----AVKKADVVMLLLPD 70 (165)
T ss_dssp HCTSEEEEES-SHHHHHHHHHHHHCC-EEEEEE-TTCHHHHHHHHTT-ECCEHHH----HHHC-SEEEE-S-H
T ss_pred cCCCEEEEECCChHHHHHHHHHHhCCCCEEEEecCCCcCHHHHHHCCCeeccHHH----HHhhCCEEEEeCCh
Confidence 4689999999999999999999999999999999998888888888776666554 34568999998874
No 107
>PRK01438 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=97.45 E-value=0.0011 Score=71.87 Aligned_cols=98 Identities=29% Similarity=0.309 Sum_probs=61.1
Q ss_pred cccCCcEEEEEccchhHHHHHHHHHHCCCeEEEEeCCH-HHHHHHHHHhcCcccccc--cccccCCCCccEEEEcCCCCC
Q 010101 363 SPIAGKIFVLVGAGGAGRALAFGAKSRGARVIIFNRNY-ERAKALADAVSGEALHFE--YLHEFFPEKGMILANASAIGM 439 (518)
Q Consensus 363 ~~l~~k~vlvlGaGg~araia~~L~~~G~~v~i~nRt~-~ka~~la~~~~~~~~~~~--~l~~~~~~~~divInatp~g~ 439 (518)
..+++++|+|+|+|++|.++|..|.+.|++|+++++.. +....+.+.+....+.+. +-.. ....+|+||-++ |
T Consensus 12 ~~~~~~~v~viG~G~~G~~~A~~L~~~G~~V~~~d~~~~~~~~~~~~~l~~~gv~~~~~~~~~-~~~~~D~Vv~s~--G- 87 (480)
T PRK01438 12 SDWQGLRVVVAGLGVSGFAAADALLELGARVTVVDDGDDERHRALAAILEALGATVRLGPGPT-LPEDTDLVVTSP--G- 87 (480)
T ss_pred cCcCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCchhhhHHHHHHHHHcCCEEEECCCcc-ccCCCCEEEECC--C-
Confidence 45678999999999999999999999999999999654 333333333311111110 0000 001123333111 1
Q ss_pred CCCCCCCCCChhhhcCCCEEEEEeeCCCchHHHHHHHHCCCeeeccHHHH
Q 010101 440 EPNSDQSPVPKEALKAYELVFDAVYTPRNTRLLREAAEVGATVVSGVEMF 489 (518)
Q Consensus 440 ~~~~~~~~~~~~~l~~~~~v~Di~Y~P~~T~ll~~A~~~G~~~i~G~~ml 489 (518)
.|..+++++.|+++|+++++..+.+
T Consensus 88 -------------------------i~~~~~~~~~a~~~gi~v~~~~e~~ 112 (480)
T PRK01438 88 -------------------------WRPDAPLLAAAADAGIPVWGEVELA 112 (480)
T ss_pred -------------------------cCCCCHHHHHHHHCCCeecchHHHH
Confidence 1345788899999999999888865
No 108
>PRK05476 S-adenosyl-L-homocysteine hydrolase; Provisional
Probab=97.44 E-value=0.00037 Score=73.91 Aligned_cols=91 Identities=26% Similarity=0.247 Sum_probs=63.7
Q ss_pred cccCCcEEEEEccchhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHhcCcccccccccccCCCCccEEEEcCCCCCCCC
Q 010101 363 SPIAGKIFVLVGAGGAGRALAFGAKSRGARVIIFNRNYERAKALADAVSGEALHFEYLHEFFPEKGMILANASAIGMEPN 442 (518)
Q Consensus 363 ~~l~~k~vlvlGaGg~araia~~L~~~G~~v~i~nRt~~ka~~la~~~~~~~~~~~~l~~~~~~~~divInatp~g~~~~ 442 (518)
..+.|++++|+|+|.+|+.++..|...|++|+++++++.++...+. .+....++++ ....+|++|.+|.. ..
T Consensus 208 ~~l~Gk~VlViG~G~IG~~vA~~lr~~Ga~ViV~d~dp~ra~~A~~-~G~~v~~l~e----al~~aDVVI~aTG~--~~- 279 (425)
T PRK05476 208 VLIAGKVVVVAGYGDVGKGCAQRLRGLGARVIVTEVDPICALQAAM-DGFRVMTMEE----AAELGDIFVTATGN--KD- 279 (425)
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHhCCCEEEEEcCCchhhHHHHh-cCCEecCHHH----HHhCCCEEEECCCC--HH-
Confidence 3568999999999999999999999999999999999988754433 3444333333 34578999998842 11
Q ss_pred CCCCCCCh---hhhcCCCEEEEEeeC
Q 010101 443 SDQSPVPK---EALKAYELVFDAVYT 465 (518)
Q Consensus 443 ~~~~~~~~---~~l~~~~~v~Di~Y~ 465 (518)
.+.. ..++++.+++.+-..
T Consensus 280 ----vI~~~~~~~mK~GailiNvG~~ 301 (425)
T PRK05476 280 ----VITAEHMEAMKDGAILANIGHF 301 (425)
T ss_pred ----HHHHHHHhcCCCCCEEEEcCCC
Confidence 1222 234566666665443
No 109
>PRK08328 hypothetical protein; Provisional
Probab=97.44 E-value=0.00022 Score=69.88 Aligned_cols=112 Identities=21% Similarity=0.289 Sum_probs=65.0
Q ss_pred cCCcEEEEEccchhHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHHhcCc--cccc--------ccccccCCCCccEEEE
Q 010101 365 IAGKIFVLVGAGGAGRALAFGAKSRGA-RVIIFNRNYERAKALADAVSGE--ALHF--------EYLHEFFPEKGMILAN 433 (518)
Q Consensus 365 l~~k~vlvlGaGg~araia~~L~~~G~-~v~i~nRt~~ka~~la~~~~~~--~~~~--------~~l~~~~~~~~divIn 433 (518)
+.+++|+|+|+||.|..++..|+..|+ +++|++.+.-....|-.++-.. .+.- +.+.. -+.++.|+
T Consensus 25 L~~~~VlIiG~GGlGs~ia~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~dvG~~~k~~~a~~~l~~---~np~v~v~ 101 (231)
T PRK08328 25 LKKAKVAVVGVGGLGSPVAYYLAAAGVGRILLIDEQTPELSNLNRQILHWEEDLGKNPKPLSAKWKLER---FNSDIKIE 101 (231)
T ss_pred HhCCcEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCccChhhhccccccChhhcCchHHHHHHHHHHHH---hCCCCEEE
Confidence 567899999999999999999999999 9999998765544443222100 0000 00111 12455565
Q ss_pred cCCCCCCCCCCCCCCChhhhcCCCEEEEEeeCCCchHHHHH--HHHCCCeeecc
Q 010101 434 ASAIGMEPNSDQSPVPKEALKAYELVFDAVYTPRNTRLLRE--AAEVGATVVSG 485 (518)
Q Consensus 434 atp~g~~~~~~~~~~~~~~l~~~~~v~Di~Y~P~~T~ll~~--A~~~G~~~i~G 485 (518)
+.+ ++.. +.. ..+.+++..+|+|.++++ .|+++-. |++.|++++.|
T Consensus 102 ~~~-~~~~---~~~-~~~~l~~~D~Vid~~d~~-~~r~~l~~~~~~~~ip~i~g 149 (231)
T PRK08328 102 TFV-GRLS---EEN-IDEVLKGVDVIVDCLDNF-ETRYLLDDYAHKKGIPLVHG 149 (231)
T ss_pred EEe-ccCC---HHH-HHHHHhcCCEEEECCCCH-HHHHHHHHHHHHcCCCEEEE
Confidence 532 2211 101 122455666777777775 3444433 66777766554
No 110
>PRK13243 glyoxylate reductase; Reviewed
Probab=97.44 E-value=0.00033 Score=72.37 Aligned_cols=70 Identities=21% Similarity=0.314 Sum_probs=51.8
Q ss_pred cccCCcEEEEEccchhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHhcCcccccccccccCCCCccEEEEcCCCC
Q 010101 363 SPIAGKIFVLVGAGGAGRALAFGAKSRGARVIIFNRNYERAKALADAVSGEALHFEYLHEFFPEKGMILANASAIG 438 (518)
Q Consensus 363 ~~l~~k~vlvlGaGg~araia~~L~~~G~~v~i~nRt~~ka~~la~~~~~~~~~~~~l~~~~~~~~divInatp~g 438 (518)
..+.||++.|+|.|.+|++++..|...|++|.+++|+.+... ...++.... ++.+ ...++|+|+.++|..
T Consensus 146 ~~L~gktvgIiG~G~IG~~vA~~l~~~G~~V~~~d~~~~~~~--~~~~~~~~~---~l~e-ll~~aDiV~l~lP~t 215 (333)
T PRK13243 146 YDVYGKTIGIIGFGRIGQAVARRAKGFGMRILYYSRTRKPEA--EKELGAEYR---PLEE-LLRESDFVSLHVPLT 215 (333)
T ss_pred cCCCCCEEEEECcCHHHHHHHHHHHHCCCEEEEECCCCChhh--HHHcCCEec---CHHH-HHhhCCEEEEeCCCC
Confidence 357899999999999999999999999999999999865432 233332222 3333 345689998888853
No 111
>PF02423 OCD_Mu_crystall: Ornithine cyclodeaminase/mu-crystallin family; InterPro: IPR003462 This entry represents the bacterial ornithine cyclodeaminase enzyme family, which catalyse the deamination of ornithine to proline []. The family also includes mu-crystallin, a mammalian homologue of bacterial ornithine cyclodeaminase [], which is the major component of the eye lens in several Australian marsupials. mRNA for mu-crystallin has also been found in human retina [].; PDB: 1U7H_B 1X7D_B 2I99_B 3HDJ_A 1VLL_B 1OMO_A.
Probab=97.44 E-value=0.00033 Score=71.82 Aligned_cols=96 Identities=23% Similarity=0.235 Sum_probs=59.9
Q ss_pred CcEEEEEccchhHHHHHHHHHH-CCC-eEEEEeCCHHHHHHHHHHhcCc---ccccccccccCCCCccEEEEcCCCCCC-
Q 010101 367 GKIFVLVGAGGAGRALAFGAKS-RGA-RVIIFNRNYERAKALADAVSGE---ALHFEYLHEFFPEKGMILANASAIGME- 440 (518)
Q Consensus 367 ~k~vlvlGaGg~araia~~L~~-~G~-~v~i~nRt~~ka~~la~~~~~~---~~~~~~l~~~~~~~~divInatp~g~~- 440 (518)
.+++.|+|+|.-|+.-+.++.. .+. +|.|++|++++++++++.+... ....++.++ ...++|+||-||+....
T Consensus 128 ~~~l~viGaG~QA~~~~~a~~~~~~i~~v~v~~r~~~~~~~~~~~~~~~~~~v~~~~~~~~-av~~aDii~taT~s~~~~ 206 (313)
T PF02423_consen 128 ARTLGVIGAGVQARWHLRALAAVRPIKEVRVYSRSPERAEAFAARLRDLGVPVVAVDSAEE-AVRGADIIVTATPSTTPA 206 (313)
T ss_dssp --EEEEE--SHHHHHHHHHHHHHS--SEEEEE-SSHHHHHHHHHHHHCCCTCEEEESSHHH-HHTTSSEEEE----SSEE
T ss_pred CceEEEECCCHHHHHHHHHHHHhCCceEEEEEccChhHHHHHHHhhccccccceeccchhh-hcccCCEEEEccCCCCCC
Confidence 3689999999999999998875 567 9999999999999999988751 112234444 56789999999986531
Q ss_pred CCCCCCCCChhhhcCCCEEEEEe-eCCCc
Q 010101 441 PNSDQSPVPKEALKAYELVFDAV-YTPRN 468 (518)
Q Consensus 441 ~~~~~~~~~~~~l~~~~~v~Di~-Y~P~~ 468 (518)
| .+..++++++..+.-+- |.|..
T Consensus 207 P-----~~~~~~l~~g~hi~~iGs~~~~~ 230 (313)
T PF02423_consen 207 P-----VFDAEWLKPGTHINAIGSYTPGM 230 (313)
T ss_dssp E-----SB-GGGS-TT-EEEE-S-SSTTB
T ss_pred c-----cccHHHcCCCcEEEEecCCCCch
Confidence 2 25677888887666553 34654
No 112
>PRK11559 garR tartronate semialdehyde reductase; Provisional
Probab=97.43 E-value=0.00029 Score=71.45 Aligned_cols=111 Identities=14% Similarity=0.166 Sum_probs=74.1
Q ss_pred cEEEEEccchhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHhcCcccccccccccCCCCccEEEEcCCCCCCCCCCCCC
Q 010101 368 KIFVLVGAGGAGRALAFGAKSRGARVIIFNRNYERAKALADAVSGEALHFEYLHEFFPEKGMILANASAIGMEPNSDQSP 447 (518)
Q Consensus 368 k~vlvlGaGg~araia~~L~~~G~~v~i~nRt~~ka~~la~~~~~~~~~~~~l~~~~~~~~divInatp~g~~~~~~~~~ 447 (518)
.++.|||.|.+|.+++..|.+.|.+|+++||+.++.+++.+. +... ..+..+ ...++|+||.++|.... .....
T Consensus 3 ~~IgviG~G~mG~~~a~~l~~~g~~v~~~d~~~~~~~~~~~~-g~~~--~~~~~e-~~~~~d~vi~~vp~~~~--~~~v~ 76 (296)
T PRK11559 3 MKVGFIGLGIMGKPMSKNLLKAGYSLVVYDRNPEAVAEVIAA-GAET--ASTAKA-VAEQCDVIITMLPNSPH--VKEVA 76 (296)
T ss_pred ceEEEEccCHHHHHHHHHHHHCCCeEEEEcCCHHHHHHHHHC-CCee--cCCHHH-HHhcCCEEEEeCCCHHH--HHHHH
Confidence 479999999999999999999999999999999998876542 2211 112222 23568999999985421 01000
Q ss_pred CC----hhhhcCCCEEEEEeeCCCch--HHHHHHHHCCCeeec
Q 010101 448 VP----KEALKAYELVFDAVYTPRNT--RLLREAAEVGATVVS 484 (518)
Q Consensus 448 ~~----~~~l~~~~~v~Di~Y~P~~T--~ll~~A~~~G~~~i~ 484 (518)
.. ...++++.+++|+...+..+ .+.+.++++|..+++
T Consensus 77 ~~~~~~~~~~~~g~iiid~st~~~~~~~~l~~~~~~~g~~~~d 119 (296)
T PRK11559 77 LGENGIIEGAKPGTVVIDMSSIAPLASREIAAALKAKGIEMLD 119 (296)
T ss_pred cCcchHhhcCCCCcEEEECCCCCHHHHHHHHHHHHHcCCcEEE
Confidence 00 11246678999998875433 455566667766544
No 113
>TIGR00561 pntA NAD(P) transhydrogenase, alpha subunit. In some species, such as Rhodospirillum rubrum, the alpha chain is replaced by two shorter chains, both with some homology to the full-length alpha chain modeled here. These score below the trusted cutoff.
Probab=97.43 E-value=0.00076 Score=73.01 Aligned_cols=99 Identities=22% Similarity=0.284 Sum_probs=69.6
Q ss_pred cCCcEEEEEccchhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHhcCccccccc-------------------------
Q 010101 365 IAGKIFVLVGAGGAGRALAFGAKSRGARVIIFNRNYERAKALADAVSGEALHFEY------------------------- 419 (518)
Q Consensus 365 l~~k~vlvlGaGg~araia~~L~~~G~~v~i~nRt~~ka~~la~~~~~~~~~~~~------------------------- 419 (518)
..+.+++|+|+|.+|.+++..+..+|++|++++++.++.+ .++.++...+.++.
T Consensus 162 vp~akVlViGaG~iGl~Aa~~ak~lGA~V~v~d~~~~rle-~a~~lGa~~v~v~~~e~g~~~~gYa~~~s~~~~~~~~~~ 240 (511)
T TIGR00561 162 VPPAKVLVIGAGVAGLAAIGAANSLGAIVRAFDTRPEVKE-QVQSMGAEFLELDFKEEGGSGDGYAKVMSEEFIAAEMEL 240 (511)
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHHHHH-HHHHcCCeEEeccccccccccccceeecCHHHHHHHHHH
Confidence 3468999999999999999999999999999999998754 55667765432221
Q ss_pred ccccCCCCccEEEEcCCCCCCCCCCCCCCChh---hhcCCCEEEEEeeCCC
Q 010101 420 LHEFFPEKGMILANASAIGMEPNSDQSPVPKE---ALKAYELVFDAVYTPR 467 (518)
Q Consensus 420 l~~~~~~~~divInatp~g~~~~~~~~~~~~~---~l~~~~~v~Di~Y~P~ 467 (518)
+.+ ...++|++|+|.-+.-.|. +..+..+ .++++.+++|+...+.
T Consensus 241 ~~e-~~~~~DIVI~TalipG~~a--P~Lit~emv~~MKpGsvIVDlA~d~G 288 (511)
T TIGR00561 241 FAA-QAKEVDIIITTALIPGKPA--PKLITEEMVDSMKAGSVIVDLAAEQG 288 (511)
T ss_pred HHH-HhCCCCEEEECcccCCCCC--CeeehHHHHhhCCCCCEEEEeeeCCC
Confidence 111 2467999999883321221 1123433 4578899999988764
No 114
>PLN02350 phosphogluconate dehydrogenase (decarboxylating)
Probab=97.43 E-value=0.00017 Score=77.94 Aligned_cols=112 Identities=20% Similarity=0.187 Sum_probs=75.4
Q ss_pred cEEEEEccchhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHh---cCc----ccccccccccCCCCccEEEEcCCCCCC
Q 010101 368 KIFVLVGAGGAGRALAFGAKSRGARVIIFNRNYERAKALADAV---SGE----ALHFEYLHEFFPEKGMILANASAIGME 440 (518)
Q Consensus 368 k~vlvlGaGg~araia~~L~~~G~~v~i~nRt~~ka~~la~~~---~~~----~~~~~~l~~~~~~~~divInatp~g~~ 440 (518)
.++-+||-|-||++++..|.+.|++|+|+|||.++++++.+.. |.. ..+.+++.+ .++++|+||-+.+.+-.
T Consensus 7 ~~IG~IGLG~MG~~mA~nL~~~G~~V~V~NRt~~k~~~l~~~~~~~Ga~~~~~a~s~~e~v~-~l~~~dvIi~~v~~~~a 85 (493)
T PLN02350 7 SRIGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKKEGNLPLYGFKDPEDFVL-SIQKPRSVIILVKAGAP 85 (493)
T ss_pred CCEEEEeeHHHHHHHHHHHHhCCCeEEEECCCHHHHHHHHHhhhhcCCcccccCCCHHHHHh-cCCCCCEEEEECCCcHH
Confidence 4699999999999999999999999999999999999988742 222 113333322 34458999987765421
Q ss_pred CCCCCCCCC--hhhhcCCCEEEEEeeC-CCchHHH-HHHHHCCCeee
Q 010101 441 PNSDQSPVP--KEALKAYELVFDAVYT-PRNTRLL-REAAEVGATVV 483 (518)
Q Consensus 441 ~~~~~~~~~--~~~l~~~~~v~Di~Y~-P~~T~ll-~~A~~~G~~~i 483 (518)
++.. +. ...+.++.+++|+... |..|.-+ ++++++|+.++
T Consensus 86 --V~~V-i~gl~~~l~~G~iiID~sT~~~~~t~~~~~~l~~~Gi~fl 129 (493)
T PLN02350 86 --VDQT-IKALSEYMEPGDCIIDGGNEWYENTERRIKEAAEKGLLYL 129 (493)
T ss_pred --HHHH-HHHHHhhcCCCCEEEECCCCCHHHHHHHHHHHHHcCCeEE
Confidence 1111 11 1235678899999876 5555444 44466666543
No 115
>PRK08655 prephenate dehydrogenase; Provisional
Probab=97.43 E-value=8.5e-05 Score=79.59 Aligned_cols=113 Identities=20% Similarity=0.273 Sum_probs=75.6
Q ss_pred EEEEEc-cchhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHhcCcccccccccccCCCCccEEEEcCCCCCCCCCCCCC
Q 010101 369 IFVLVG-AGGAGRALAFGAKSRGARVIIFNRNYERAKALADAVSGEALHFEYLHEFFPEKGMILANASAIGMEPNSDQSP 447 (518)
Q Consensus 369 ~vlvlG-aGg~araia~~L~~~G~~v~i~nRt~~ka~~la~~~~~~~~~~~~l~~~~~~~~divInatp~g~~~~~~~~~ 447 (518)
++.|+| .|++|++++..|.+.|.+|++++|+.+++++++..++... ..+..+ ...++|+||.|+|+..... .
T Consensus 2 kI~IIGG~G~mG~slA~~L~~~G~~V~v~~r~~~~~~~~a~~~gv~~--~~~~~e-~~~~aDvVIlavp~~~~~~----v 74 (437)
T PRK08655 2 KISIIGGTGGLGKWFARFLKEKGFEVIVTGRDPKKGKEVAKELGVEY--ANDNID-AAKDADIVIISVPINVTED----V 74 (437)
T ss_pred EEEEEecCCHHHHHHHHHHHHCCCEEEEEECChHHHHHHHHHcCCee--ccCHHH-HhccCCEEEEecCHHHHHH----H
Confidence 689998 7999999999999999999999999999888888776432 112222 3456899999998753211 1
Q ss_pred CCh--hhhcCCCEEEEEeeC-CCchHHHHHHHHCCCeeeccHHH
Q 010101 448 VPK--EALKAYELVFDAVYT-PRNTRLLREAAEVGATVVSGVEM 488 (518)
Q Consensus 448 ~~~--~~l~~~~~v~Di~Y~-P~~T~ll~~A~~~G~~~i~G~~m 488 (518)
+.. ..++++.+++|+... +.....++.....|.+++.+-.|
T Consensus 75 l~~l~~~l~~~~iViDvsSvK~~~~~~l~~~~~~~~~~V~~HPm 118 (437)
T PRK08655 75 IKEVAPHVKEGSLLMDVTSVKERPVEAMEEYAPEGVEILPTHPM 118 (437)
T ss_pred HHHHHhhCCCCCEEEEcccccHHHHHHHHHhcCCCCEEEEcCCC
Confidence 111 135677899999863 22222223222236667766555
No 116
>PF02882 THF_DHG_CYH_C: Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain; InterPro: IPR020631 Enzymes that participate in the transfer of one-carbon units require the coenzyme tetrahydrofolate (THF). Various reactions generate one-carbon derivatives of THF, which can be interconverted between different oxidation states by methylene-THF dehydrogenase (1.5.1.5 from EC), methenyl-THF cyclohydrolase (3.5.4.9 from EC) and formyl-THF synthetase (6.3.4.3 from EC) [, ]. The dehydrogenase and cyclohydrolase activities are expressed by a variety of multifunctional enzymes, including the tri-functional eukaryotic C1-tetrahydrofolate synthase []; a bifunctional eukaryotic mitochondrial protein; and the bifunctional Escherichia coli folD protein [, ]. Methylene-tetrahydrofolate dehydrogenase and methenyltetrahydrofolate cyclo-hydrolase share an overlapping active site [], and as such are usually located together in proteins, acting in tandem on the carbon-nitrogen bonds of substrates other than peptide bonds. This entry represents the NAD(P)-binding domain found in these enzymes.; GO: 0003824 catalytic activity, 0004488 methylenetetrahydrofolate dehydrogenase (NADP+) activity, 0009396 folic acid-containing compound biosynthetic process, 0055114 oxidation-reduction process; PDB: 1B0A_A 2C2X_B 2C2Y_A 3NGL_C 3NGX_A 4A26_B 1EDZ_A 1EE9_A 3P2O_B 1DIA_A ....
Probab=97.42 E-value=0.0011 Score=61.05 Aligned_cols=110 Identities=23% Similarity=0.337 Sum_probs=67.6
Q ss_pred cccCCcEEEEEccch-hHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHhcCcccccccccccCCCCccEEEEcCCCCCCC
Q 010101 363 SPIAGKIFVLVGAGG-AGRALAFGAKSRGARVIIFNRNYERAKALADAVSGEALHFEYLHEFFPEKGMILANASAIGMEP 441 (518)
Q Consensus 363 ~~l~~k~vlvlGaGg-~araia~~L~~~G~~v~i~nRt~~ka~~la~~~~~~~~~~~~l~~~~~~~~divInatp~g~~~ 441 (518)
.+++||+++|+|.+. .|+.++.-|.+.|+.|+++...-+..++ ...++|+||.|++. |
T Consensus 32 ~~l~Gk~v~VvGrs~~VG~Pla~lL~~~~atVt~~h~~T~~l~~------------------~~~~ADIVVsa~G~---~ 90 (160)
T PF02882_consen 32 IDLEGKKVVVVGRSNIVGKPLAMLLLNKGATVTICHSKTKNLQE------------------ITRRADIVVSAVGK---P 90 (160)
T ss_dssp -STTT-EEEEE-TTTTTHHHHHHHHHHTT-EEEEE-TTSSSHHH------------------HHTTSSEEEE-SSS---T
T ss_pred CCCCCCEEEEECCcCCCChHHHHHHHhCCCeEEeccCCCCcccc------------------eeeeccEEeeeecc---c
Confidence 678999999999986 9999999999999999999876432222 23468999988853 2
Q ss_pred CCCCCCCChhhhcCCCEEEEEeeCCC--c------hHHHHHHHH-CCC--eeeccHH-----HHHHHHHHHHH
Q 010101 442 NSDQSPVPKEALKAYELVFDAVYTPR--N------TRLLREAAE-VGA--TVVSGVE-----MFIRQALGQFR 498 (518)
Q Consensus 442 ~~~~~~~~~~~l~~~~~v~Di~Y~P~--~------T~ll~~A~~-~G~--~~i~G~~-----ml~~Qa~~qf~ 498 (518)
+ .++.++++++.+|+|+-.++. . -.+ ..+++ .++ ++-.|.+ ||+.+-+.+.+
T Consensus 91 ~----~i~~~~ik~gavVIDvG~~~~~~~~~~~GDv~~-~~~~~~a~~itPvPgGVGplT~a~L~~N~v~a~~ 158 (160)
T PF02882_consen 91 N----LIKADWIKPGAVVIDVGINYVPGDGKLVGDVDF-ESVKEKASAITPVPGGVGPLTVAMLMKNLVKAAK 158 (160)
T ss_dssp T-----B-GGGS-TTEEEEE--CEEETTTTEEEESB-H-HHHHTTCSEEE-SSSSCHHHHHHHHHHHHHHHHH
T ss_pred c----ccccccccCCcEEEecCCccccccceeeecccH-HHhhccceEEeeCCCCccHHHHHHHHHHHHHHHH
Confidence 2 377889999999999976644 2 233 34444 343 2234555 66666655544
No 117
>PRK06407 ornithine cyclodeaminase; Provisional
Probab=97.42 E-value=0.00042 Score=70.57 Aligned_cols=94 Identities=19% Similarity=0.229 Sum_probs=67.2
Q ss_pred CcEEEEEccchhHHHHHHHHHHC-CC-eEEEEeCCHHHHHHHHHHhcCc----ccccccccccCCCCccEEEEcCCCCCC
Q 010101 367 GKIFVLVGAGGAGRALAFGAKSR-GA-RVIIFNRNYERAKALADAVSGE----ALHFEYLHEFFPEKGMILANASAIGME 440 (518)
Q Consensus 367 ~k~vlvlGaGg~araia~~L~~~-G~-~v~i~nRt~~ka~~la~~~~~~----~~~~~~l~~~~~~~~divInatp~g~~ 440 (518)
.+++.|+|+|.-|+.-+.++... +. +|.|+||++++++++++++... ....++.++ ...++|+|+-||+.. .
T Consensus 117 a~~l~iiGaG~QA~~~~~a~~~v~~i~~v~v~~r~~~~a~~f~~~~~~~~~~~v~~~~~~~e-av~~aDIV~taT~s~-~ 194 (301)
T PRK06407 117 VENFTIIGSGFQAETQLEGMASVYNPKRIRVYSRNFDHARAFAERFSKEFGVDIRPVDNAEA-ALRDADTITSITNSD-T 194 (301)
T ss_pred CcEEEEECCcHHHHHHHHHHHhcCCCCEEEEECCCHHHHHHHHHHHHHhcCCcEEEeCCHHH-HHhcCCEEEEecCCC-C
Confidence 47899999999999999888754 56 8999999999999999887532 222233444 467899999999854 2
Q ss_pred CCCCCCCCChhhhcCCCEEEEE-eeCCC
Q 010101 441 PNSDQSPVPKEALKAYELVFDA-VYTPR 467 (518)
Q Consensus 441 ~~~~~~~~~~~~l~~~~~v~Di-~Y~P~ 467 (518)
|. +..++++++..|.=+ .|.|.
T Consensus 195 P~-----~~~~~l~pg~hV~aiGs~~p~ 217 (301)
T PRK06407 195 PI-----FNRKYLGDEYHVNLAGSNYPN 217 (301)
T ss_pred cE-----ecHHHcCCCceEEecCCCCCC
Confidence 32 456778776443332 34454
No 118
>PRK06199 ornithine cyclodeaminase; Validated
Probab=97.36 E-value=0.00048 Score=72.33 Aligned_cols=90 Identities=19% Similarity=0.239 Sum_probs=64.3
Q ss_pred CcEEEEEccchhHHHHHHHHHH-C-CC-eEEEEeCCHHHHHHHHHHhcCc------ccccccccccCCCCccEEEEcCCC
Q 010101 367 GKIFVLVGAGGAGRALAFGAKS-R-GA-RVIIFNRNYERAKALADAVSGE------ALHFEYLHEFFPEKGMILANASAI 437 (518)
Q Consensus 367 ~k~vlvlGaGg~araia~~L~~-~-G~-~v~i~nRt~~ka~~la~~~~~~------~~~~~~l~~~~~~~~divInatp~ 437 (518)
-+++.|+|+|..|+.-+.++.. . +. +|+|+||++++++++++++... ....++.++ ...++|||+-||+.
T Consensus 155 a~~l~iiG~G~QA~~~l~a~~~v~~~i~~V~v~~r~~~~a~~f~~~~~~~~~~~~~v~~~~s~~e-av~~ADIVvtaT~s 233 (379)
T PRK06199 155 SKVVGLLGPGVMGKTILAAFMAVCPGIDTIKIKGRGQKSLDSFATWVAETYPQITNVEVVDSIEE-VVRGSDIVTYCNSG 233 (379)
T ss_pred CCEEEEECCcHHHHHHHHHHHHhcCCccEEEEECCCHHHHHHHHHHHHHhcCCCceEEEeCCHHH-HHcCCCEEEEccCC
Confidence 4789999999999999999886 3 37 9999999999999999888532 111233334 46789999999974
Q ss_pred CCC-CCCCCCC-CChhhhcCCCEE
Q 010101 438 GME-PNSDQSP-VPKEALKAYELV 459 (518)
Q Consensus 438 g~~-~~~~~~~-~~~~~l~~~~~v 459 (518)
... |. ..| +..++++++..|
T Consensus 234 ~~~~~s--~~Pv~~~~~lkpG~hv 255 (379)
T PRK06199 234 ETGDPS--TYPYVKREWVKPGAFL 255 (379)
T ss_pred CCCCCC--cCcEecHHHcCCCcEE
Confidence 321 11 123 456677776544
No 119
>PRK13302 putative L-aspartate dehydrogenase; Provisional
Probab=97.36 E-value=0.00053 Score=68.81 Aligned_cols=108 Identities=17% Similarity=0.212 Sum_probs=75.2
Q ss_pred CcEEEEEccchhHHHHHHHHHHC--CCeE-EEEeCCHHHHHHHHHHhcCc--ccccccccccCCCCccEEEEcCCCCCCC
Q 010101 367 GKIFVLVGAGGAGRALAFGAKSR--GARV-IIFNRNYERAKALADAVSGE--ALHFEYLHEFFPEKGMILANASAIGMEP 441 (518)
Q Consensus 367 ~k~vlvlGaGg~araia~~L~~~--G~~v-~i~nRt~~ka~~la~~~~~~--~~~~~~l~~~~~~~~divInatp~g~~~ 441 (518)
..++.|||.|.+|+..+..|... ++++ .+++|++++++++++.++.. ..+++++ ..+.|+|+.|+|.....
T Consensus 6 ~irIGIIG~G~IG~~~a~~L~~~~~~~el~aV~dr~~~~a~~~a~~~g~~~~~~~~eel----l~~~D~Vvi~tp~~~h~ 81 (271)
T PRK13302 6 ELRVAIAGLGAIGKAIAQALDRGLPGLTLSAVAVRDPQRHADFIWGLRRPPPVVPLDQL----ATHADIVVEAAPASVLR 81 (271)
T ss_pred eeEEEEECccHHHHHHHHHHHhcCCCeEEEEEECCCHHHHHHHHHhcCCCcccCCHHHH----hcCCCEEEECCCcHHHH
Confidence 46899999999999999999863 6665 48999999999999988732 2234443 34579999999865321
Q ss_pred CCCCCCCChhhhcCCCEEEEEeeC-C-CchHHHHHHHHCCCeee
Q 010101 442 NSDQSPVPKEALKAYELVFDAVYT-P-RNTRLLREAAEVGATVV 483 (518)
Q Consensus 442 ~~~~~~~~~~~l~~~~~v~Di~Y~-P-~~T~ll~~A~~~G~~~i 483 (518)
.+....+..+.-|+...-. . ....+.+.|++.|.++.
T Consensus 82 -----e~~~~aL~aGk~Vi~~s~gal~~~~~L~~~A~~~g~~l~ 120 (271)
T PRK13302 82 -----AIVEPVLAAGKKAIVLSVGALLRNEDLIDLARQNGGQII 120 (271)
T ss_pred -----HHHHHHHHcCCcEEEecchhHHhHHHHHHHHHHcCCEEE
Confidence 1223446655555554322 1 23677788899998853
No 120
>PRK03369 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=97.35 E-value=0.0011 Score=72.21 Aligned_cols=97 Identities=19% Similarity=0.236 Sum_probs=63.1
Q ss_pred cCCcEEEEEccchhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHhcCcccccccccccCCCCccEEEEcCCCCCCCCCC
Q 010101 365 IAGKIFVLVGAGGAGRALAFGAKSRGARVIIFNRNYERAKALADAVSGEALHFEYLHEFFPEKGMILANASAIGMEPNSD 444 (518)
Q Consensus 365 l~~k~vlvlGaGg~araia~~L~~~G~~v~i~nRt~~ka~~la~~~~~~~~~~~~l~~~~~~~~divInatp~g~~~~~~ 444 (518)
+.+++++|+|.|++|++++..|...|++|+++++..++.+. ++..+.....-....+ .+.++|+||.+. |
T Consensus 10 ~~~~~v~V~G~G~sG~aa~~~L~~~G~~v~~~D~~~~~~~~-l~~~g~~~~~~~~~~~-~l~~~D~VV~Sp--G------ 79 (488)
T PRK03369 10 LPGAPVLVAGAGVTGRAVLAALTRFGARPTVCDDDPDALRP-HAERGVATVSTSDAVQ-QIADYALVVTSP--G------ 79 (488)
T ss_pred cCCCeEEEEcCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHH-HHhCCCEEEcCcchHh-HhhcCCEEEECC--C------
Confidence 46789999999999999999999999999999987665443 2333321111000000 122344444322 1
Q ss_pred CCCCChhhhcCCCEEEEEeeCCCchHHHHHHHHCCCeeeccHHHHHH
Q 010101 445 QSPVPKEALKAYELVFDAVYTPRNTRLLREAAEVGATVVSGVEMFIR 491 (518)
Q Consensus 445 ~~~~~~~~l~~~~~v~Di~Y~P~~T~ll~~A~~~G~~~i~G~~ml~~ 491 (518)
.|...|.+++|+++|++++.-++++..
T Consensus 80 --------------------i~~~~p~~~~a~~~gi~v~~~iel~~~ 106 (488)
T PRK03369 80 --------------------FRPTAPVLAAAAAAGVPIWGDVELAWR 106 (488)
T ss_pred --------------------CCCCCHHHHHHHHCCCcEeeHHHHhhh
Confidence 133567789999999999988887543
No 121
>PRK07589 ornithine cyclodeaminase; Validated
Probab=97.35 E-value=0.00079 Score=69.78 Aligned_cols=96 Identities=16% Similarity=0.227 Sum_probs=67.1
Q ss_pred CcEEEEEccchhHHHHHHHHHH-CCC-eEEEEeCCHHHHHHHHHHhcCccc---ccccccccCCCCccEEEEcCCCCCCC
Q 010101 367 GKIFVLVGAGGAGRALAFGAKS-RGA-RVIIFNRNYERAKALADAVSGEAL---HFEYLHEFFPEKGMILANASAIGMEP 441 (518)
Q Consensus 367 ~k~vlvlGaGg~araia~~L~~-~G~-~v~i~nRt~~ka~~la~~~~~~~~---~~~~l~~~~~~~~divInatp~g~~~ 441 (518)
-++++|||+|.-|+.-+.++.. ... +|+|+||++++++++++++....+ ..+++++ ...++|+|+.||+.. .
T Consensus 129 a~~l~iiGaG~QA~~~l~a~~~vr~i~~V~v~~r~~~~a~~~~~~~~~~~~~v~~~~~~~~-av~~ADIIvtaT~S~-~- 205 (346)
T PRK07589 129 SRTMALIGNGAQSEFQALAFKALLGIEEIRLYDIDPAATAKLARNLAGPGLRIVACRSVAE-AVEGADIITTVTADK-T- 205 (346)
T ss_pred CcEEEEECCcHHHHHHHHHHHHhCCceEEEEEeCCHHHHHHHHHHHHhcCCcEEEeCCHHH-HHhcCCEEEEecCCC-C-
Confidence 4789999999999999887764 456 999999999999999988863211 2233444 567899999999732 1
Q ss_pred CCCCCC-CChhhhcCCCEEEEE-eeCCCc
Q 010101 442 NSDQSP-VPKEALKAYELVFDA-VYTPRN 468 (518)
Q Consensus 442 ~~~~~~-~~~~~l~~~~~v~Di-~Y~P~~ 468 (518)
..| +..++++++..|.=+ .|.|..
T Consensus 206 ---~~Pvl~~~~lkpG~hV~aIGs~~p~~ 231 (346)
T PRK07589 206 ---NATILTDDMVEPGMHINAVGGDCPGK 231 (346)
T ss_pred ---CCceecHHHcCCCcEEEecCCCCCCc
Confidence 112 556788776643322 355644
No 122
>cd01076 NAD_bind_1_Glu_DH NAD(P) binding domain of glutamate dehydrogenase, subgroup 1. Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NADP+. Glutamate DH is a multidomain enzyme that catalyzes the reaction from glutamate to 2-oxyoglutarate and ammonia in the presence of NAD or NADP. It is present in all organisms. Enzymes involved in ammonia assimilation are typically NADP+-dependent, while those involved in glutamate catabolism are generally NAD+-dependent. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids
Probab=97.35 E-value=0.0037 Score=61.02 Aligned_cols=135 Identities=19% Similarity=0.167 Sum_probs=88.8
Q ss_pred HHHHHHHHHHHHHhhccCCCCCCCCcccCCcEEEEEccchhHHHHHHHHHHCCCeEE-EEeC----------CHHHHHHH
Q 010101 338 CESAISAIEDALRERQGINGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGARVI-IFNR----------NYERAKAL 406 (518)
Q Consensus 338 ~~G~~~~l~~~l~~~~~~~~~~~~~~~l~~k~vlvlGaGg~araia~~L~~~G~~v~-i~nR----------t~~ka~~l 406 (518)
+.|...+++..+.... ..+.+++++|.|.|.+|+.++..|.+.|++|+ |.+. +.++..+.
T Consensus 11 g~Gv~~~~~~~~~~~~---------~~l~~~~v~I~G~G~VG~~~a~~L~~~g~~vv~v~D~~g~~~~~~Gld~~~l~~~ 81 (227)
T cd01076 11 GRGVAYATREALKKLG---------IGLAGARVAIQGFGNVGSHAARFLHEAGAKVVAVSDSDGTIYNPDGLDVPALLAY 81 (227)
T ss_pred hHHHHHHHHHHHHhcC---------CCccCCEEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCeEECCCCCCHHHHHHH
Confidence 5788888877665421 46789999999999999999999999999766 8877 77777666
Q ss_pred HHHhcC-------cccccccccccCCCCccEEEEcCCCCCCCCCCCCCCChhhhcCCCEEEEEeeCCCchHHHHHHHHCC
Q 010101 407 ADAVSG-------EALHFEYLHEFFPEKGMILANASAIGMEPNSDQSPVPKEALKAYELVFDAVYTPRNTRLLREAAEVG 479 (518)
Q Consensus 407 a~~~~~-------~~~~~~~l~~~~~~~~divInatp~g~~~~~~~~~~~~~~l~~~~~v~Di~Y~P~~T~ll~~A~~~G 479 (518)
.+..+. ..++.+++- ..++|++|-|+..+.. +.... ..++ ..+|+.-.-+|-...--+.-+++|
T Consensus 82 ~~~~g~l~~~~~~~~~~~~~i~---~~~~Dvlip~a~~~~i---~~~~~--~~l~-a~~I~egAN~~~t~~a~~~L~~rG 152 (227)
T cd01076 82 KKEHGSVLGFPGAERITNEELL---ELDCDILIPAALENQI---TADNA--DRIK-AKIIVEAANGPTTPEADEILHERG 152 (227)
T ss_pred HHhcCCcccCCCceecCCccce---eecccEEEecCccCcc---CHHHH--hhce-eeEEEeCCCCCCCHHHHHHHHHCC
Confidence 665542 111112221 2368999998864422 11111 1232 467888887776433334447789
Q ss_pred CeeeccHHHHH
Q 010101 480 ATVVSGVEMFI 490 (518)
Q Consensus 480 ~~~i~G~~ml~ 490 (518)
+.+++..-.-.
T Consensus 153 i~~~PD~~aNa 163 (227)
T cd01076 153 VLVVPDILANA 163 (227)
T ss_pred CEEEChHHhcC
Confidence 98887665443
No 123
>cd01079 NAD_bind_m-THF_DH NAD binding domain of methylene-tetrahydrofolate dehydrogenase. The NAD-binding domain of methylene-tetrahydrofolate dehydrogenase (m-THF DH). M-THF is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. M-THF DH is a component of an unusual monofunctional enzyme; in eukaryotes, m-THF DH is typically found as part of a multifunctional protein. NADP-dependent m-THF DHs in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofunctional DH, as well as bifunctional DH/cyclodrolase are found. In addition, yeast (S. cerevisiae) also express an monofunctional DH. This family contains only the monofunctional
Probab=97.35 E-value=0.00049 Score=64.87 Aligned_cols=126 Identities=20% Similarity=0.245 Sum_probs=75.1
Q ss_pred cccCCcEEEEEccch-hHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHhcCccccccc----ccccCCCCccEEEEcCCC
Q 010101 363 SPIAGKIFVLVGAGG-AGRALAFGAKSRGARVIIFNRNYERAKALADAVSGEALHFEY----LHEFFPEKGMILANASAI 437 (518)
Q Consensus 363 ~~l~~k~vlvlGaGg-~araia~~L~~~G~~v~i~nRt~~ka~~la~~~~~~~~~~~~----l~~~~~~~~divInatp~ 437 (518)
.+++||+++|||-+. .|+.++.-|.+.|+.|++++.+--....-.........+..+ +.+ ...++||||.|++.
T Consensus 58 ~~l~GK~vvVIGrS~iVGkPla~lL~~~~AtVti~~~~~~~~~~~~~~~~hs~t~~~~~~~~l~~-~~~~ADIVIsAvG~ 136 (197)
T cd01079 58 NRLYGKTITIINRSEVVGRPLAALLANDGARVYSVDINGIQVFTRGESIRHEKHHVTDEEAMTLD-CLSQSDVVITGVPS 136 (197)
T ss_pred CCCCCCEEEEECCCccchHHHHHHHHHCCCEEEEEecCcccccccccccccccccccchhhHHHH-HhhhCCEEEEccCC
Confidence 478999999999986 999999999999999999963211100000000000000011 222 45679999988863
Q ss_pred CCCCCCCCCCCChhhhcCCCEEEEEeeCCCchHHHHHHHHCCCeeecc-----HHHHHHHHHHHHH
Q 010101 438 GMEPNSDQSPVPKEALKAYELVFDAVYTPRNTRLLREAAEVGATVVSG-----VEMFIRQALGQFR 498 (518)
Q Consensus 438 g~~~~~~~~~~~~~~l~~~~~v~Di~Y~P~~T~ll~~A~~~G~~~i~G-----~~ml~~Qa~~qf~ 498 (518)
|. ..++.++++++.+|+|+-.+-.. -+.+++.--.+.+. ..||+..-+..++
T Consensus 137 ---~~---~~i~~d~ik~GavVIDVGi~~dv---d~~v~~~as~iTPvVGpvTva~L~~Nlv~~~~ 193 (197)
T cd01079 137 ---PN---YKVPTELLKDGAICINFASIKNF---EPSVKEKASIYVPSIGKVTIAMLLRNLLRLYH 193 (197)
T ss_pred ---CC---CccCHHHcCCCcEEEEcCCCcCc---cHhHHhhcCEeCCCcCHHHHHHHHHHHHHHHH
Confidence 21 12688999999999999766321 13333321122332 3377766665554
No 124
>PRK14106 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=97.33 E-value=0.0014 Score=70.41 Aligned_cols=44 Identities=36% Similarity=0.471 Sum_probs=36.7
Q ss_pred cCCcEEEEEccchhHHHHHHHHHHCCCeEEEEeCCH-HHHHHHHH
Q 010101 365 IAGKIFVLVGAGGAGRALAFGAKSRGARVIIFNRNY-ERAKALAD 408 (518)
Q Consensus 365 l~~k~vlvlGaGg~araia~~L~~~G~~v~i~nRt~-~ka~~la~ 408 (518)
+++|+++|+|+|++|++++..|++.|++|++++++. +..++..+
T Consensus 3 ~~~k~v~iiG~g~~G~~~A~~l~~~G~~V~~~d~~~~~~~~~~~~ 47 (450)
T PRK14106 3 LKGKKVLVVGAGVSGLALAKFLKKLGAKVILTDEKEEDQLKEALE 47 (450)
T ss_pred cCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHH
Confidence 467999999999999999999999999999999985 33433333
No 125
>PRK08762 molybdopterin biosynthesis protein MoeB; Validated
Probab=97.28 E-value=0.00031 Score=73.86 Aligned_cols=71 Identities=15% Similarity=0.300 Sum_probs=53.0
Q ss_pred cCCcEEEEEccchhHHHHHHHHHHCCC-eEEEEeCC-------------------HHHHHHHHHHhcC--cccccc----
Q 010101 365 IAGKIFVLVGAGGAGRALAFGAKSRGA-RVIIFNRN-------------------YERAKALADAVSG--EALHFE---- 418 (518)
Q Consensus 365 l~~k~vlvlGaGg~araia~~L~~~G~-~v~i~nRt-------------------~~ka~~la~~~~~--~~~~~~---- 418 (518)
+++++|+|+|+||.|..++..|+..|+ +|++++++ ..|++.+++.+.. ..+.++
T Consensus 133 l~~~~VlvvG~GG~Gs~ia~~La~~Gvg~i~lvD~d~v~~sNl~Rq~l~~~~diG~~Ka~~~~~~l~~~np~v~v~~~~~ 212 (376)
T PRK08762 133 LLEARVLLIGAGGLGSPAALYLAAAGVGTLGIVDHDVVDRSNLQRQILHTEDRVGQPKVDSAAQRLAALNPDVQVEAVQE 212 (376)
T ss_pred HhcCcEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCEecchhhccccccchhhCCCcHHHHHHHHHHHHCCCCEEEEEec
Confidence 346899999999999999999999999 99999998 5688888777642 111111
Q ss_pred -----cccccCCCCccEEEEcCC
Q 010101 419 -----YLHEFFPEKGMILANASA 436 (518)
Q Consensus 419 -----~l~~~~~~~~divInatp 436 (518)
++.+ .+.++|+||+||-
T Consensus 213 ~~~~~~~~~-~~~~~D~Vv~~~d 234 (376)
T PRK08762 213 RVTSDNVEA-LLQDVDVVVDGAD 234 (376)
T ss_pred cCChHHHHH-HHhCCCEEEECCC
Confidence 1111 2457899999983
No 126
>PRK07417 arogenate dehydrogenase; Reviewed
Probab=97.28 E-value=0.00023 Score=71.68 Aligned_cols=112 Identities=18% Similarity=0.132 Sum_probs=74.5
Q ss_pred EEEEEccchhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHhcCcccccccccccCCCCccEEEEcCCCCCCCCCCCCCC
Q 010101 369 IFVLVGAGGAGRALAFGAKSRGARVIIFNRNYERAKALADAVSGEALHFEYLHEFFPEKGMILANASAIGMEPNSDQSPV 448 (518)
Q Consensus 369 ~vlvlGaGg~araia~~L~~~G~~v~i~nRt~~ka~~la~~~~~~~~~~~~l~~~~~~~~divInatp~g~~~~~~~~~~ 448 (518)
+|.|||.|-+|.+++.+|.+.|.+|++++|+.++.+++.+. +.......+. + ...++|+||.|+|...... .+
T Consensus 2 ~I~IIG~G~mG~sla~~L~~~g~~V~~~d~~~~~~~~a~~~-g~~~~~~~~~-~-~~~~aDlVilavp~~~~~~----~~ 74 (279)
T PRK07417 2 KIGIVGLGLIGGSLGLDLRSLGHTVYGVSRRESTCERAIER-GLVDEASTDL-S-LLKDCDLVILALPIGLLLP----PS 74 (279)
T ss_pred eEEEEeecHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHC-CCcccccCCH-h-HhcCCCEEEEcCCHHHHHH----HH
Confidence 58999999999999999999999999999999887776543 2111011111 1 2467899999998643211 01
Q ss_pred C--hhhhcCCCEEEEEeeCCCchHHHHHHHHCCCeeeccHHHH
Q 010101 449 P--KEALKAYELVFDAVYTPRNTRLLREAAEVGATVVSGVEMF 489 (518)
Q Consensus 449 ~--~~~l~~~~~v~Di~Y~P~~T~ll~~A~~~G~~~i~G~~ml 489 (518)
. ...++++.++.|+... ....++.+.+.+.+++.+-.|.
T Consensus 75 ~~l~~~l~~~~ii~d~~Sv--k~~~~~~~~~~~~~~v~~HPm~ 115 (279)
T PRK07417 75 EQLIPALPPEAIVTDVGSV--KAPIVEAWEKLHPRFVGSHPMA 115 (279)
T ss_pred HHHHHhCCCCcEEEeCcch--HHHHHHHHHHhhCCceeeCCcC
Confidence 1 1124667889998765 3455677766655566655544
No 127
>PLN02256 arogenate dehydrogenase
Probab=97.26 E-value=0.00044 Score=70.52 Aligned_cols=117 Identities=18% Similarity=0.150 Sum_probs=75.0
Q ss_pred CCcEEEEEccchhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHhcCcccccccccccCCCCccEEEEcCCCCCCCCCCC
Q 010101 366 AGKIFVLVGAGGAGRALAFGAKSRGARVIIFNRNYERAKALADAVSGEALHFEYLHEFFPEKGMILANASAIGMEPNSDQ 445 (518)
Q Consensus 366 ~~k~vlvlGaGg~araia~~L~~~G~~v~i~nRt~~ka~~la~~~~~~~~~~~~l~~~~~~~~divInatp~g~~~~~~~ 445 (518)
++.++.|||+|.+|.+++..|.+.|.+|++++|+.. .+.+..++... +.+..+....++|+||.|+|+......-.
T Consensus 35 ~~~kI~IIG~G~mG~slA~~L~~~G~~V~~~d~~~~--~~~a~~~gv~~--~~~~~e~~~~~aDvVilavp~~~~~~vl~ 110 (304)
T PLN02256 35 RKLKIGIVGFGNFGQFLAKTFVKQGHTVLATSRSDY--SDIAAELGVSF--FRDPDDFCEEHPDVVLLCTSILSTEAVLR 110 (304)
T ss_pred CCCEEEEEeeCHHHHHHHHHHHhCCCEEEEEECccH--HHHHHHcCCee--eCCHHHHhhCCCCEEEEecCHHHHHHHHH
Confidence 567899999999999999999999999999999964 35555555422 22322211135899999998753221000
Q ss_pred CCCChhhhcCCCEEEEEeeCCCchHHHHHHHH---CCCeeeccHHHH
Q 010101 446 SPVPKEALKAYELVFDAVYTPRNTRLLREAAE---VGATVVSGVEMF 489 (518)
Q Consensus 446 ~~~~~~~l~~~~~v~Di~Y~P~~T~ll~~A~~---~G~~~i~G~~ml 489 (518)
.+....++++.+|.|+... ....++..++ .+++++.+-.|+
T Consensus 111 -~l~~~~l~~~~iviDv~Sv--K~~~~~~~~~~l~~~~~~V~~HPma 154 (304)
T PLN02256 111 -SLPLQRLKRSTLFVDVLSV--KEFPKNLLLQVLPEEFDILCTHPMF 154 (304)
T ss_pred -hhhhhccCCCCEEEecCCc--hHHHHHHHHHhCCCCCeEEecCCCC
Confidence 0111225677899999874 3344455554 245566666655
No 128
>PRK12475 thiamine/molybdopterin biosynthesis MoeB-like protein; Provisional
Probab=97.25 E-value=0.00048 Score=71.27 Aligned_cols=71 Identities=28% Similarity=0.387 Sum_probs=52.9
Q ss_pred ccCCcEEEEEccchhHHHHHHHHHHCCC-eEEEEeCCH---------------------HHHHHHHHHhcC---cc----
Q 010101 364 PIAGKIFVLVGAGGAGRALAFGAKSRGA-RVIIFNRNY---------------------ERAKALADAVSG---EA---- 414 (518)
Q Consensus 364 ~l~~k~vlvlGaGg~araia~~L~~~G~-~v~i~nRt~---------------------~ka~~la~~~~~---~~---- 414 (518)
.+++++|+|+|+||.|..++..|+..|+ +|+|++++. .|++.+++.+.. ..
T Consensus 21 ~L~~~~VlIiG~GglGs~va~~La~aGvg~i~lvD~D~ve~sNL~RQ~l~~~~d~~~g~~Ka~aa~~~l~~inp~v~i~~ 100 (338)
T PRK12475 21 KIREKHVLIVGAGALGAANAEALVRAGIGKLTIADRDYVEWSNLQRQQLYTEEDAKQKKPKAIAAKEHLRKINSEVEIVP 100 (338)
T ss_pred hhcCCcEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCcccccccCccccccHHHccCCccHHHHHHHHHHHHCCCcEEEE
Confidence 3567899999999999999999999999 999999974 467776665532 11
Q ss_pred c----ccccccccCCCCccEEEEcC
Q 010101 415 L----HFEYLHEFFPEKGMILANAS 435 (518)
Q Consensus 415 ~----~~~~l~~~~~~~~divInat 435 (518)
. +.+++.+ ...++|+||+||
T Consensus 101 ~~~~~~~~~~~~-~~~~~DlVid~~ 124 (338)
T PRK12475 101 VVTDVTVEELEE-LVKEVDLIIDAT 124 (338)
T ss_pred EeccCCHHHHHH-HhcCCCEEEEcC
Confidence 0 1112223 356799999998
No 129
>cd00401 AdoHcyase S-adenosyl-L-homocysteine hydrolase (AdoHycase) catalyzes the hydrolysis of S-adenosyl-L-homocysteine (AdoHyc) to form adenosine (Ado) and homocysteine (Hcy). The equilibrium lies far on the side of AdoHyc synthesis, but in nature the removal of Ado and Hyc is sufficiently fast, so that the net reaction is in the direction of hydrolysis. Since AdoHyc is a potent inhibitor of S-adenosyl-L-methionine dependent methyltransferases, AdoHycase plays a critical role in the modulation of the activity of various methyltransferases. The enzyme forms homooligomers of 45-50kDa subunits, each binding one molecule of NAD+.
Probab=97.24 E-value=0.00096 Score=70.61 Aligned_cols=69 Identities=29% Similarity=0.347 Sum_probs=55.1
Q ss_pred cccCCcEEEEEccchhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHhcCcccccccccccCCCCccEEEEcCC
Q 010101 363 SPIAGKIFVLVGAGGAGRALAFGAKSRGARVIIFNRNYERAKALADAVSGEALHFEYLHEFFPEKGMILANASA 436 (518)
Q Consensus 363 ~~l~~k~vlvlGaGg~araia~~L~~~G~~v~i~nRt~~ka~~la~~~~~~~~~~~~l~~~~~~~~divInatp 436 (518)
..+.|++|+|+|+|.+|+.++..+...|++|+++++++.|++ .|..+|......++ ....+|++|.||.
T Consensus 198 ~~l~GktVvViG~G~IG~~va~~ak~~Ga~ViV~d~d~~R~~-~A~~~G~~~~~~~e----~v~~aDVVI~atG 266 (413)
T cd00401 198 VMIAGKVAVVAGYGDVGKGCAQSLRGQGARVIVTEVDPICAL-QAAMEGYEVMTMEE----AVKEGDIFVTTTG 266 (413)
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEECChhhHH-HHHhcCCEEccHHH----HHcCCCEEEECCC
Confidence 457899999999999999999999999999999999998864 56667764433332 2346799998884
No 130
>PRK02472 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=97.23 E-value=0.0014 Score=70.44 Aligned_cols=38 Identities=21% Similarity=0.150 Sum_probs=34.2
Q ss_pred cCCcEEEEEccchhHHHHHHHHHHCCCeEEEEeCCHHH
Q 010101 365 IAGKIFVLVGAGGAGRALAFGAKSRGARVIIFNRNYER 402 (518)
Q Consensus 365 l~~k~vlvlGaGg~araia~~L~~~G~~v~i~nRt~~k 402 (518)
+++|+++|+|.|++|++++..|++.|++|++.+++...
T Consensus 3 ~~~k~v~v~G~g~~G~s~a~~l~~~G~~V~~~d~~~~~ 40 (447)
T PRK02472 3 YQNKKVLVLGLAKSGYAAAKLLHKLGANVTVNDGKPFS 40 (447)
T ss_pred cCCCEEEEEeeCHHHHHHHHHHHHCCCEEEEEcCCCcc
Confidence 45789999999999999999999999999999987544
No 131
>TIGR00873 gnd 6-phosphogluconate dehydrogenase, decarboxylating. This model does not specify whether the cofactor is NADP only (EC 1.1.1.44), NAD only, or both. The model does not assign an EC number for that reason.
Probab=97.22 E-value=0.00038 Score=75.10 Aligned_cols=110 Identities=18% Similarity=0.239 Sum_probs=73.1
Q ss_pred EEEEccchhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHhc-C-cc---cccccccccCCCCccEEEEcCCCCCCCCCC
Q 010101 370 FVLVGAGGAGRALAFGAKSRGARVIIFNRNYERAKALADAVS-G-EA---LHFEYLHEFFPEKGMILANASAIGMEPNSD 444 (518)
Q Consensus 370 vlvlGaGg~araia~~L~~~G~~v~i~nRt~~ka~~la~~~~-~-~~---~~~~~l~~~~~~~~divInatp~g~~~~~~ 444 (518)
+.|||.|-||.+++..|++.|++|+++||++++++++.+... . .. .+.+++.+ .+.++|+||-+.|.+-. ++
T Consensus 2 IG~IGLG~MG~~mA~nL~~~G~~V~v~drt~~~~~~l~~~~~~g~~~~~~~s~~e~v~-~l~~~dvIil~v~~~~~--v~ 78 (467)
T TIGR00873 2 IGVIGLAVMGSNLALNMADHGFTVSVYNRTPEKTDEFLAEHAKGKKIVGAYSIEEFVQ-SLERPRKIMLMVKAGAP--VD 78 (467)
T ss_pred EEEEeeHHHHHHHHHHHHhcCCeEEEEeCCHHHHHHHHhhccCCCCceecCCHHHHHh-hcCCCCEEEEECCCcHH--HH
Confidence 679999999999999999999999999999999999987622 1 11 12333322 23567988888776521 11
Q ss_pred CCCCCh--hhhcCCCEEEEEee-CCCchH-HHHHHHHCCCeee
Q 010101 445 QSPVPK--EALKAYELVFDAVY-TPRNTR-LLREAAEVGATVV 483 (518)
Q Consensus 445 ~~~~~~--~~l~~~~~v~Di~Y-~P~~T~-ll~~A~~~G~~~i 483 (518)
. .+.. ..+.++.+++|..- .|..|. ..++.+++|+.++
T Consensus 79 ~-Vi~~l~~~L~~g~iIID~gns~~~~t~~~~~~l~~~gi~fv 120 (467)
T TIGR00873 79 A-VINQLLPLLEKGDIIIDGGNSHYPDTERRYKELKAKGILFV 120 (467)
T ss_pred H-HHHHHHhhCCCCCEEEECCCcCHHHHHHHHHHHHhcCCEEE
Confidence 1 1111 23567889999975 455543 3345556676543
No 132
>PRK09424 pntA NAD(P) transhydrogenase subunit alpha; Provisional
Probab=97.21 E-value=0.0012 Score=71.68 Aligned_cols=98 Identities=22% Similarity=0.252 Sum_probs=68.0
Q ss_pred cCCcEEEEEccchhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHhcCcccccc--c-----------ccc---------
Q 010101 365 IAGKIFVLVGAGGAGRALAFGAKSRGARVIIFNRNYERAKALADAVSGEALHFE--Y-----------LHE--------- 422 (518)
Q Consensus 365 l~~k~vlvlGaGg~araia~~L~~~G~~v~i~nRt~~ka~~la~~~~~~~~~~~--~-----------l~~--------- 422 (518)
..+.+|+|+|+|.+|..++..+..+|++|+++++++++.+ .++++|.+...++ + +.+
T Consensus 163 ~pg~kVlViGaG~iGL~Ai~~Ak~lGA~V~a~D~~~~rle-~aeslGA~~v~i~~~e~~~~~~gya~~~s~~~~~~~~~~ 241 (509)
T PRK09424 163 VPPAKVLVIGAGVAGLAAIGAAGSLGAIVRAFDTRPEVAE-QVESMGAEFLELDFEEEGGSGDGYAKVMSEEFIKAEMAL 241 (509)
T ss_pred cCCCEEEEECCcHHHHHHHHHHHHCCCEEEEEeCCHHHHH-HHHHcCCeEEEeccccccccccchhhhcchhHHHHHHHH
Confidence 3578999999999999999999999999999999998865 5667886532221 0 000
Q ss_pred --cCCCCccEEEEcCCCCCCCCCCCCCCCh---hhhcCCCEEEEEeeC
Q 010101 423 --FFPEKGMILANASAIGMEPNSDQSPVPK---EALKAYELVFDAVYT 465 (518)
Q Consensus 423 --~~~~~~divInatp~g~~~~~~~~~~~~---~~l~~~~~v~Di~Y~ 465 (518)
....++|++|+|+...-.+. +..+.. +.++++.+++|+...
T Consensus 242 ~~~~~~gaDVVIetag~pg~~a--P~lit~~~v~~mkpGgvIVdvg~~ 287 (509)
T PRK09424 242 FAEQAKEVDIIITTALIPGKPA--PKLITAEMVASMKPGSVIVDLAAE 287 (509)
T ss_pred HHhccCCCCEEEECCCCCcccC--cchHHHHHHHhcCCCCEEEEEccC
Confidence 01246899999986432211 111222 245788999999874
No 133
>PRK05479 ketol-acid reductoisomerase; Provisional
Probab=97.21 E-value=0.00068 Score=69.58 Aligned_cols=71 Identities=24% Similarity=0.236 Sum_probs=55.3
Q ss_pred cccCCcEEEEEccchhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHhcCcccccccccccCCCCccEEEEcCCC
Q 010101 363 SPIAGKIFVLVGAGGAGRALAFGAKSRGARVIIFNRNYERAKALADAVSGEALHFEYLHEFFPEKGMILANASAI 437 (518)
Q Consensus 363 ~~l~~k~vlvlGaGg~araia~~L~~~G~~v~i~nRt~~ka~~la~~~~~~~~~~~~l~~~~~~~~divInatp~ 437 (518)
..++++++.|||.|-+|++++..|...|++|.+.+|+.++..+.++..+....+.+ + ...++|+|+.++|.
T Consensus 13 ~~L~gktIgIIG~GsmG~AlA~~L~~sG~~Vvv~~r~~~~s~~~A~~~G~~~~s~~---e-aa~~ADVVvLaVPd 83 (330)
T PRK05479 13 SLIKGKKVAIIGYGSQGHAHALNLRDSGVDVVVGLREGSKSWKKAEADGFEVLTVA---E-AAKWADVIMILLPD 83 (330)
T ss_pred hhhCCCEEEEEeeHHHHHHHHHHHHHCCCEEEEEECCchhhHHHHHHCCCeeCCHH---H-HHhcCCEEEEcCCH
Confidence 35778999999999999999999999999999999987777777776664433322 2 34567888888774
No 134
>cd05211 NAD_bind_Glu_Leu_Phe_Val NAD(P) binding domain of glutamate dehydrogenase, leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase. Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NAD(P)+. This subfamily includes glutamate, leucine, phenylalanine, and valine DHs. Glutamate DH is a multi-domain enzyme that catalyzes the reaction from glutamate to 2-oxyoglutarate and ammonia in the presence of NAD or NADP. It is present in all organisms. Enzymes involved in ammonia assimilation are typically NADP+-dependent, while those involved in glutamate catabolism are generally NAD+-dependent. As in other NAD+-dependent DHs, monomers in this family have 2 domains separated by a deep cleft. Here the c-terminal domain contains a modified NAD-binding Rossmann fold with 7 rather than the usual 6 beta strands and one strand anti-parral
Probab=97.12 E-value=0.011 Score=57.36 Aligned_cols=149 Identities=15% Similarity=0.193 Sum_probs=91.9
Q ss_pred HHHHHHHHHHHHHhhccCCCCCCCCcccCCcEEEEEccchhHHHHHHHHHHCCC-eEEEEeCCH----------HHHHHH
Q 010101 338 CESAISAIEDALRERQGINGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGA-RVIIFNRNY----------ERAKAL 406 (518)
Q Consensus 338 ~~G~~~~l~~~l~~~~~~~~~~~~~~~l~~k~vlvlGaGg~araia~~L~~~G~-~v~i~nRt~----------~ka~~l 406 (518)
+.|...+++..+... + .++++++++|.|.|.+|+.++..|.++|+ .|.|.+.+. +..+..
T Consensus 3 g~Gv~~~~~~~~~~~-~--------~~l~g~~vaIqGfGnVG~~~a~~L~~~G~~vV~vsD~~g~i~~~Gld~~~l~~~~ 73 (217)
T cd05211 3 GYGVVVAMKAAMKHL-G--------DSLEGLTVAVQGLGNVGWGLAKKLAEEGGKVLAVSDPDGYIYDPGITTEELINYA 73 (217)
T ss_pred hhHHHHHHHHHHHHc-C--------CCcCCCEEEEECCCHHHHHHHHHHHHcCCEEEEEEcCCCcEECCCCCHHHHHHHH
Confidence 567777777655432 1 46889999999999999999999999999 788888776 544433
Q ss_pred HHHhcCccccc-ccc--cccCCCCccEEEEcCCCCCCCCCCCCCCChhhhcCCCEEEEEeeCCCchHHHHHHHHCCCeee
Q 010101 407 ADAVSGEALHF-EYL--HEFFPEKGMILANASAIGMEPNSDQSPVPKEALKAYELVFDAVYTPRNTRLLREAAEVGATVV 483 (518)
Q Consensus 407 a~~~~~~~~~~-~~l--~~~~~~~~divInatp~g~~~~~~~~~~~~~~l~~~~~v~Di~Y~P~~T~ll~~A~~~G~~~i 483 (518)
.+..+....+- +.+ .+....++|++|-|+.-+. ++..+. ..+ ..++|+.-.-+|-...--+.-+++|..++
T Consensus 74 ~~~~~~~~~~~~~~~~~~~l~~~~~DVlipaA~~~~---i~~~~a--~~l-~a~~V~e~AN~p~t~~a~~~L~~~Gi~v~ 147 (217)
T cd05211 74 VALGGSARVKVQDYFPGEAILGLDVDIFAPCALGNV---IDLENA--KKL-KAKVVAEGANNPTTDEALRILHERGIVVA 147 (217)
T ss_pred HhhCCccccCcccccCcccceeccccEEeeccccCc---cChhhH--hhc-CccEEEeCCCCCCCHHHHHHHHHCCcEEE
Confidence 33322111111 001 1111236899998886442 122111 122 24678888877764433344477899888
Q ss_pred ccHHHHHHHHHHHHHHhc
Q 010101 484 SGVEMFIRQALGQFRLFT 501 (518)
Q Consensus 484 ~G~~ml~~Qa~~qf~lw~ 501 (518)
+..-+-....+.++--|.
T Consensus 148 Pd~~~NaGGvi~s~~E~~ 165 (217)
T cd05211 148 PDIVANAGGVIVSYFEWV 165 (217)
T ss_pred ChHHhcCCCeEeEHHHhc
Confidence 888776544444444444
No 135
>PF01210 NAD_Gly3P_dh_N: NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus; InterPro: IPR011128 NAD-dependent glycerol-3-phosphate dehydrogenase (GPDH) catalyses the interconversion of dihydroxyacetone phosphate and L-glycerol-3-phosphate. This family represents the N-terminal NAD-binding domain [].; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0046168 glycerol-3-phosphate catabolic process, 0055114 oxidation-reduction process, 0005737 cytoplasm; PDB: 1YJ8_B 2PLA_A 1WPQ_B 1X0V_A 1X0X_A 1BG6_A 1TXG_B 1N1G_A 1M67_A 1JDJ_A ....
Probab=97.10 E-value=0.00096 Score=61.28 Aligned_cols=69 Identities=23% Similarity=0.274 Sum_probs=49.9
Q ss_pred EEEEEccchhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHhc-Ccc---cc-------cccccccCCCCccEEEEcCCC
Q 010101 369 IFVLVGAGGAGRALAFGAKSRGARVIIFNRNYERAKALADAVS-GEA---LH-------FEYLHEFFPEKGMILANASAI 437 (518)
Q Consensus 369 ~vlvlGaGg~araia~~L~~~G~~v~i~nRt~~ka~~la~~~~-~~~---~~-------~~~l~~~~~~~~divInatp~ 437 (518)
+|.|+|+|..|.|+|..|+..|.+|+++.|+.+..+.+-+.-. ... .. -.++++ .++++|+||-++|.
T Consensus 1 KI~ViGaG~~G~AlA~~la~~g~~V~l~~~~~~~~~~i~~~~~n~~~~~~~~l~~~i~~t~dl~~-a~~~ad~IiiavPs 79 (157)
T PF01210_consen 1 KIAVIGAGNWGTALAALLADNGHEVTLWGRDEEQIEEINETRQNPKYLPGIKLPENIKATTDLEE-ALEDADIIIIAVPS 79 (157)
T ss_dssp EEEEESSSHHHHHHHHHHHHCTEEEEEETSCHHHHHHHHHHTSETTTSTTSBEETTEEEESSHHH-HHTT-SEEEE-S-G
T ss_pred CEEEECcCHHHHHHHHHHHHcCCEEEEEeccHHHHHHHHHhCCCCCCCCCcccCcccccccCHHH-HhCcccEEEecccH
Confidence 5899999999999999999999999999999998888865432 111 00 123333 45778999999985
Q ss_pred C
Q 010101 438 G 438 (518)
Q Consensus 438 g 438 (518)
-
T Consensus 80 ~ 80 (157)
T PF01210_consen 80 Q 80 (157)
T ss_dssp G
T ss_pred H
Confidence 3
No 136
>KOG4230 consensus C1-tetrahydrofolate synthase [Coenzyme transport and metabolism]
Probab=97.10 E-value=0.015 Score=62.28 Aligned_cols=185 Identities=19% Similarity=0.192 Sum_probs=120.7
Q ss_pred ecCCCCcccCHHHHHHHHHHcCCCceEEecccC----cHHHHHHHh-cCCCCCEEEecccchHHHHhcccccC------h
Q 010101 243 VSNPVGHSKGPILHNPAFRHTRFNGIYVPMLVD----DVKEFFRTY-SGTDFAGFSVGIPHKEPAVACCDEVH------P 311 (518)
Q Consensus 243 iG~pi~hS~SP~~hn~~f~~~gl~~~y~~~~~~----~l~~~~~~l-~~~~~~G~~VT~P~K~~v~~~~d~~~------~ 311 (518)
+|+--..+.--.|-.++.+..|++..|.+++-+ ++-.-+..+ .++...|+.|-.|+- .++|+-+ +
T Consensus 42 VGnR~DSnvYVrmKlKAA~e~Gid~~~iklPetiTe~ell~~I~~lNeD~tvHGiiVQLPLp----~hide~~Vt~aI~p 117 (935)
T KOG4230|consen 42 VGNREDSNVYVRMKLKAAKEIGIDAKHIKLPETITEGELLREIKALNEDPTVHGIIVQLPLP----AHIDEDTVTEAIDP 117 (935)
T ss_pred ecCcCCcceeehhhhhHHHhcCCceEEecCcccccHHHHHHHHHhccCCCccceEEEeccCc----cccchhhHhhccCc
Confidence 455444445556888999999999999998753 343444555 466799999999976 3333211 0
Q ss_pred --hhhhcCceeEEEEeccCCeEEEeecCHHHHHHHHHHHHHhhccCCCCCCCCcccCCcEEEEEccch-hHHHHHHHHHH
Q 010101 312 --LAKSIGAVNTIIRRPIDGKLVGYNTDCESAISAIEDALRERQGINGVASHTSPIAGKIFVLVGAGG-AGRALAFGAKS 388 (518)
Q Consensus 312 --~A~~iGavNTi~~~~~~g~l~G~NTD~~G~~~~l~~~l~~~~~~~~~~~~~~~l~~k~vlvlGaGg-~araia~~L~~ 388 (518)
...-.+..|.=.-.+.+|+-+=+-.--.|++..|++. + ..+.|++++|+|-.- +|+.+++-|.+
T Consensus 118 eKDVDGf~~~NaG~Lak~~g~p~f~PCTPkGcmeLlk~a-----~--------v~v~Gk~aVVlGRS~IVG~Pia~LL~~ 184 (935)
T KOG4230|consen 118 EKDVDGFTRINAGRLAKGEGQPTFIPCTPKGCMELLKEA-----G--------VFVAGKNAVVLGRSKIVGSPIAALLLW 184 (935)
T ss_pred ccccccccccchhhhhccCCCceeeccChHHHHHHHHHc-----C--------CccccceeEEEecccccCChHHHHHHh
Confidence 1111233443221111444444555678988876641 2 678999999999764 88999999999
Q ss_pred CCCeEEEEeCCHHHHHHHHHHhcCcccccccccccCCCCccEEEEcCCCCCCCCCCCCCCChhhhcCCCEEEEE--eeCC
Q 010101 389 RGARVIIFNRNYERAKALADAVSGEALHFEYLHEFFPEKGMILANASAIGMEPNSDQSPVPKEALKAYELVFDA--VYTP 466 (518)
Q Consensus 389 ~G~~v~i~nRt~~ka~~la~~~~~~~~~~~~l~~~~~~~~divInatp~g~~~~~~~~~~~~~~l~~~~~v~Di--~Y~P 466 (518)
..+.|+++-- |.+.|++ ...++||||.|+.. |. -+-.+|++++.+|+|+ +|-|
T Consensus 185 ~NaTVTiCHS---KT~~lae---------------~v~~ADIvIvAiG~---Pe----fVKgdWiKpGavVIDvGINyvp 239 (935)
T KOG4230|consen 185 ANATVTICHS---KTRNLAE---------------KVSRADIVIVAIGQ---PE----FVKGDWIKPGAVVIDVGINYVP 239 (935)
T ss_pred cCceEEEecC---CCccHHH---------------HhccCCEEEEEcCC---cc----eeecccccCCcEEEEccccccC
Confidence 8889999753 2223332 23568999988853 21 2556899999999997 6666
Q ss_pred Cch
Q 010101 467 RNT 469 (518)
Q Consensus 467 ~~T 469 (518)
..+
T Consensus 240 D~~ 242 (935)
T KOG4230|consen 240 DPS 242 (935)
T ss_pred CCC
Confidence 543
No 137
>PRK07679 pyrroline-5-carboxylate reductase; Reviewed
Probab=97.10 E-value=0.00055 Score=68.95 Aligned_cols=128 Identities=16% Similarity=0.152 Sum_probs=80.7
Q ss_pred cEEEEEccchhHHHHHHHHHHCC----CeEEEEeCCH-HHHHHHHHHhcCcccccccccccCCCCccEEEEcCCCCCCCC
Q 010101 368 KIFVLVGAGGAGRALAFGAKSRG----ARVIIFNRNY-ERAKALADAVSGEALHFEYLHEFFPEKGMILANASAIGMEPN 442 (518)
Q Consensus 368 k~vlvlGaGg~araia~~L~~~G----~~v~i~nRt~-~ka~~la~~~~~~~~~~~~l~~~~~~~~divInatp~g~~~~ 442 (518)
.++.|||+|-||.+++..|.+.| .+|+++||+. ++++.+++.++... ..+..+ ...++|+||-+++......
T Consensus 4 mkI~~IG~G~mG~aia~~l~~~g~~~~~~v~v~~r~~~~~~~~l~~~~g~~~--~~~~~e-~~~~aDvVilav~p~~~~~ 80 (279)
T PRK07679 4 QNISFLGAGSIAEAIIGGLLHANVVKGEQITVSNRSNETRLQELHQKYGVKG--THNKKE-LLTDANILFLAMKPKDVAE 80 (279)
T ss_pred CEEEEECccHHHHHHHHHHHHCCCCCcceEEEECCCCHHHHHHHHHhcCceE--eCCHHH-HHhcCCEEEEEeCHHHHHH
Confidence 57999999999999999999987 4899999986 47788887766432 122222 2356899999998643221
Q ss_pred CCCCCCChhhhcCCCEEEEEeeCCCchHHHHHHHHCCCeeeccHHHHHHHHHHHHHHhc
Q 010101 443 SDQSPVPKEALKAYELVFDAVYTPRNTRLLREAAEVGATVVSGVEMFIRQALGQFRLFT 501 (518)
Q Consensus 443 ~~~~~~~~~~l~~~~~v~Di~Y~P~~T~ll~~A~~~G~~~i~G~~ml~~Qa~~qf~lw~ 501 (518)
.- ..+ ...+.++.+++|+.-.= ....++.....+.+++.+..+.-.+....+-.|.
T Consensus 81 vl-~~l-~~~~~~~~liIs~~aGi-~~~~l~~~~~~~~~v~r~mPn~~~~~~~~~t~~~ 136 (279)
T PRK07679 81 AL-IPF-KEYIHNNQLIISLLAGV-STHSIRNLLQKDVPIIRAMPNTSAAILKSATAIS 136 (279)
T ss_pred HH-HHH-HhhcCCCCEEEEECCCC-CHHHHHHHcCCCCeEEEECCCHHHHHhcccEEEe
Confidence 00 001 11245668999985432 2222344444566777776655444444455554
No 138
>PRK06719 precorrin-2 dehydrogenase; Validated
Probab=97.08 E-value=0.0012 Score=60.72 Aligned_cols=71 Identities=17% Similarity=0.195 Sum_probs=49.4
Q ss_pred cccCCcEEEEEccchhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHhcCcccccccccccCCCCccEEEEcCC
Q 010101 363 SPIAGKIFVLVGAGGAGRALAFGAKSRGARVIIFNRNYERAKALADAVSGEALHFEYLHEFFPEKGMILANASA 436 (518)
Q Consensus 363 ~~l~~k~vlvlGaGg~araia~~L~~~G~~v~i~nRt~~ka~~la~~~~~~~~~~~~l~~~~~~~~divInatp 436 (518)
.+++|++++|+|+|.+|..-+..|.+.|++|+|++.+ ..+++.+ ++.....-..+.+..+.++|+||-+|.
T Consensus 9 l~l~~~~vlVvGGG~va~rka~~Ll~~ga~V~VIsp~--~~~~l~~-l~~i~~~~~~~~~~dl~~a~lViaaT~ 79 (157)
T PRK06719 9 FNLHNKVVVIIGGGKIAYRKASGLKDTGAFVTVVSPE--ICKEMKE-LPYITWKQKTFSNDDIKDAHLIYAATN 79 (157)
T ss_pred EEcCCCEEEEECCCHHHHHHHHHHHhCCCEEEEEcCc--cCHHHHh-ccCcEEEecccChhcCCCceEEEECCC
Confidence 5688999999999999999999999999999999644 3344433 221111112222224567899998885
No 139
>COG4221 Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only]
Probab=97.07 E-value=0.0017 Score=63.20 Aligned_cols=72 Identities=35% Similarity=0.456 Sum_probs=56.4
Q ss_pred cCCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHhcC-cc----ccccc----------ccccCCCCc
Q 010101 365 IAGKIFVLVGA-GGAGRALAFGAKSRGARVIIFNRNYERAKALADAVSG-EA----LHFEY----------LHEFFPEKG 428 (518)
Q Consensus 365 l~~k~vlvlGa-Gg~araia~~L~~~G~~v~i~nRt~~ka~~la~~~~~-~~----~~~~~----------l~~~~~~~~ 428 (518)
+++|.++|-|| .|.|.|++..|.+.|++|.+..|..++.++|+.+++. .. .++.| +.+ ...+.
T Consensus 4 ~~~kv~lITGASSGiG~A~A~~l~~~G~~vvl~aRR~drL~~la~~~~~~~~~~~~~DVtD~~~~~~~i~~~~~-~~g~i 82 (246)
T COG4221 4 LKGKVALITGASSGIGEATARALAEAGAKVVLAARREERLEALADEIGAGAALALALDVTDRAAVEAAIEALPE-EFGRI 82 (246)
T ss_pred CCCcEEEEecCcchHHHHHHHHHHHCCCeEEEEeccHHHHHHHHHhhccCceEEEeeccCCHHHHHHHHHHHHH-hhCcc
Confidence 45688999999 4899999999999999999999999999999999983 21 12211 112 34568
Q ss_pred cEEEEcCCC
Q 010101 429 MILANASAI 437 (518)
Q Consensus 429 divInatp~ 437 (518)
|++||...+
T Consensus 83 DiLvNNAGl 91 (246)
T COG4221 83 DILVNNAGL 91 (246)
T ss_pred cEEEecCCC
Confidence 999997643
No 140
>PRK08644 thiamine biosynthesis protein ThiF; Provisional
Probab=97.07 E-value=0.00096 Score=64.49 Aligned_cols=71 Identities=17% Similarity=0.279 Sum_probs=51.0
Q ss_pred ccCCcEEEEEccchhHHHHHHHHHHCCC-eEEEEeCCH------------------HHHHHHHHHhcC--ccccc-----
Q 010101 364 PIAGKIFVLVGAGGAGRALAFGAKSRGA-RVIIFNRNY------------------ERAKALADAVSG--EALHF----- 417 (518)
Q Consensus 364 ~l~~k~vlvlGaGg~araia~~L~~~G~-~v~i~nRt~------------------~ka~~la~~~~~--~~~~~----- 417 (518)
.+++++|+|+|+||+|..++..|+..|+ ++++++.+. .|++.+++.+.. ..+.+
T Consensus 25 ~L~~~~V~ViG~GglGs~ia~~La~~Gvg~i~lvD~D~ve~sNL~Rq~~~~~dvG~~Ka~~a~~~l~~lnp~v~v~~~~~ 104 (212)
T PRK08644 25 KLKKAKVGIAGAGGLGSNIAVALARSGVGNLKLVDFDVVEPSNLNRQQYFISQIGMPKVEALKENLLEINPFVEIEAHNE 104 (212)
T ss_pred HHhCCCEEEECcCHHHHHHHHHHHHcCCCeEEEEeCCEeccccccccEeehhhCCChHHHHHHHHHHHHCCCCEEEEEee
Confidence 4667899999999999999999999999 899999872 467666665531 11111
Q ss_pred ----ccccccCCCCccEEEEcC
Q 010101 418 ----EYLHEFFPEKGMILANAS 435 (518)
Q Consensus 418 ----~~l~~~~~~~~divInat 435 (518)
+++.+ ...++|+||+|+
T Consensus 105 ~i~~~~~~~-~~~~~DvVI~a~ 125 (212)
T PRK08644 105 KIDEDNIEE-LFKDCDIVVEAF 125 (212)
T ss_pred ecCHHHHHH-HHcCCCEEEECC
Confidence 11112 245689999885
No 141
>COG2423 Predicted ornithine cyclodeaminase, mu-crystallin homolog [Amino acid transport and metabolism]
Probab=97.07 E-value=0.0028 Score=65.05 Aligned_cols=113 Identities=24% Similarity=0.282 Sum_probs=79.9
Q ss_pred CcEEEEEccchhHHHHHHHHHH-CCC-eEEEEeCCHHHHHHHHHHhcCc----ccccccccccCCCCccEEEEcCCCCCC
Q 010101 367 GKIFVLVGAGGAGRALAFGAKS-RGA-RVIIFNRNYERAKALADAVSGE----ALHFEYLHEFFPEKGMILANASAIGME 440 (518)
Q Consensus 367 ~k~vlvlGaGg~araia~~L~~-~G~-~v~i~nRt~~ka~~la~~~~~~----~~~~~~l~~~~~~~~divInatp~g~~ 440 (518)
-+.+.|||+|..|+.-+.++.. .++ +|.|++|+++.++++++.+... ....++.++ ..+++|+||-|||.- .
T Consensus 130 a~~laiIGaG~qA~~ql~a~~~v~~~~~I~i~~r~~~~~e~~a~~l~~~~~~~v~a~~s~~~-av~~aDiIvt~T~s~-~ 207 (330)
T COG2423 130 ASTLAIIGAGAQARTQLEALKAVRDIREIRVYSRDPEAAEAFAARLRKRGGEAVGAADSAEE-AVEGADIVVTATPST-E 207 (330)
T ss_pred CcEEEEECCcHHHHHHHHHHHhhCCccEEEEEcCCHHHHHHHHHHHHhhcCccceeccCHHH-HhhcCCEEEEecCCC-C
Confidence 3689999999999999999985 467 9999999999999999777543 223334434 567899999999853 2
Q ss_pred CCCCCCCCChhhhcCCCEEEEEee--CCCchHHHHHHHHCC-CeeeccHH
Q 010101 441 PNSDQSPVPKEALKAYELVFDAVY--TPRNTRLLREAAEVG-ATVVSGVE 487 (518)
Q Consensus 441 ~~~~~~~~~~~~l~~~~~v~Di~Y--~P~~T~ll~~A~~~G-~~~i~G~~ 487 (518)
| .+..++++++.. +..+- .|..+.+-.+..++- +-+++-++
T Consensus 208 P-----il~~~~l~~G~h-I~aiGad~p~k~Eld~e~l~ra~~vvvD~~~ 251 (330)
T COG2423 208 P-----VLKAEWLKPGTH-INAIGADAPGKRELDPEVLARADRVVVDSLE 251 (330)
T ss_pred C-----eecHhhcCCCcE-EEecCCCCcccccCCHHHHHhcCeEEEcCHH
Confidence 2 256678887654 34433 466666666665544 66666554
No 142
>PLN02494 adenosylhomocysteinase
Probab=97.07 E-value=0.0014 Score=69.95 Aligned_cols=69 Identities=29% Similarity=0.314 Sum_probs=52.1
Q ss_pred cccCCcEEEEEccchhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHhcCcccccccccccCCCCccEEEEcCC
Q 010101 363 SPIAGKIFVLVGAGGAGRALAFGAKSRGARVIIFNRNYERAKALADAVSGEALHFEYLHEFFPEKGMILANASA 436 (518)
Q Consensus 363 ~~l~~k~vlvlGaGg~araia~~L~~~G~~v~i~nRt~~ka~~la~~~~~~~~~~~~l~~~~~~~~divInatp 436 (518)
..+.|++++|+|.|.+|+.++..+...|++|+++++++.++.. +...+....++++ .+..+|++|.||.
T Consensus 250 i~LaGKtVvViGyG~IGr~vA~~aka~Ga~VIV~e~dp~r~~e-A~~~G~~vv~leE----al~~ADVVI~tTG 318 (477)
T PLN02494 250 VMIAGKVAVICGYGDVGKGCAAAMKAAGARVIVTEIDPICALQ-ALMEGYQVLTLED----VVSEADIFVTTTG 318 (477)
T ss_pred CccCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCchhhHH-HHhcCCeeccHHH----HHhhCCEEEECCC
Confidence 4578999999999999999999999999999999999887543 3333433333332 3456799998764
No 143
>PTZ00142 6-phosphogluconate dehydrogenase; Provisional
Probab=97.07 E-value=0.00074 Score=72.85 Aligned_cols=112 Identities=21% Similarity=0.314 Sum_probs=72.2
Q ss_pred EEEEEccchhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHh---cCccccccccccc--CCCCccEEEEcCCCCCCCCC
Q 010101 369 IFVLVGAGGAGRALAFGAKSRGARVIIFNRNYERAKALADAV---SGEALHFEYLHEF--FPEKGMILANASAIGMEPNS 443 (518)
Q Consensus 369 ~vlvlGaGg~araia~~L~~~G~~v~i~nRt~~ka~~la~~~---~~~~~~~~~l~~~--~~~~~divInatp~g~~~~~ 443 (518)
++.|||.|-||.+++..|++.|++|+++||++++++++.+.. +.......++.++ .+.++|+||-+.+.+-. +
T Consensus 3 ~IgvIGLG~MG~~lA~nL~~~G~~V~v~dr~~~~~~~l~~~~~~~g~~i~~~~s~~e~v~~l~~~d~Iil~v~~~~~--v 80 (470)
T PTZ00142 3 DIGLIGLAVMGQNLALNIASRGFKISVYNRTYEKTEEFVKKAKEGNTRVKGYHTLEELVNSLKKPRKVILLIKAGEA--V 80 (470)
T ss_pred EEEEEeEhHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHhhhhcCCcceecCCHHHHHhcCCCCCEEEEEeCChHH--H
Confidence 689999999999999999999999999999999999987642 2111112222221 22357877766554411 1
Q ss_pred CCCCCC--hhhhcCCCEEEEEeeC-CCch-HHHHHHHHCCCeee
Q 010101 444 DQSPVP--KEALKAYELVFDAVYT-PRNT-RLLREAAEVGATVV 483 (518)
Q Consensus 444 ~~~~~~--~~~l~~~~~v~Di~Y~-P~~T-~ll~~A~~~G~~~i 483 (518)
+.. +. ...+.++.+++|..-. |..| ...++++++|+.++
T Consensus 81 ~~v-i~~l~~~L~~g~iIID~gn~~~~dt~~r~~~l~~~Gi~fl 123 (470)
T PTZ00142 81 DET-IDNLLPLLEKGDIIIDGGNEWYLNTERRIKRCEEKGILYL 123 (470)
T ss_pred HHH-HHHHHhhCCCCCEEEECCCCCHHHHHHHHHHHHHcCCeEE
Confidence 110 11 1135678899999765 4444 34455667776654
No 144
>PRK06476 pyrroline-5-carboxylate reductase; Reviewed
Probab=97.06 E-value=0.001 Score=66.11 Aligned_cols=101 Identities=15% Similarity=0.141 Sum_probs=65.4
Q ss_pred EEEEEccchhHHHHHHHHHHCCC---eEEEEeCCHHHHHHHHHHhc-CcccccccccccCCCCccEEEEcCCCCCCCCCC
Q 010101 369 IFVLVGAGGAGRALAFGAKSRGA---RVIIFNRNYERAKALADAVS-GEALHFEYLHEFFPEKGMILANASAIGMEPNSD 444 (518)
Q Consensus 369 ~vlvlGaGg~araia~~L~~~G~---~v~i~nRt~~ka~~la~~~~-~~~~~~~~l~~~~~~~~divInatp~g~~~~~~ 444 (518)
++.|||+|-+|++++..|.+.|. .+.+++|+.++++++++.++ ... ..+..+ ...++|+||-|++......
T Consensus 2 ~IgiIG~G~mG~aia~~L~~~g~~~~~i~v~~r~~~~~~~l~~~~~~~~~--~~~~~~-~~~~aDvVilav~p~~~~~-- 76 (258)
T PRK06476 2 KIGFIGTGAITEAMVTGLLTSPADVSEIIVSPRNAQIAARLAERFPKVRI--AKDNQA-VVDRSDVVFLAVRPQIAEE-- 76 (258)
T ss_pred eEEEECcCHHHHHHHHHHHhCCCChheEEEECCCHHHHHHHHHHcCCceE--eCCHHH-HHHhCCEEEEEeCHHHHHH--
Confidence 58999999999999999998884 47899999999999988763 222 122222 2346899999997532110
Q ss_pred CCCCChhhhcCCCEEEEEeeCCCchHHHHHHHH
Q 010101 445 QSPVPKEALKAYELVFDAVYTPRNTRLLREAAE 477 (518)
Q Consensus 445 ~~~~~~~~l~~~~~v~Di~Y~P~~T~ll~~A~~ 477 (518)
.+..-.+.++.+|++++ .+.....++....
T Consensus 77 --vl~~l~~~~~~~vis~~-ag~~~~~l~~~~~ 106 (258)
T PRK06476 77 --VLRALRFRPGQTVISVI-AATDRAALLEWIG 106 (258)
T ss_pred --HHHHhccCCCCEEEEEC-CCCCHHHHHHHhC
Confidence 01111134556777755 4455555555443
No 145
>PRK13403 ketol-acid reductoisomerase; Provisional
Probab=97.04 E-value=0.0011 Score=67.34 Aligned_cols=70 Identities=19% Similarity=0.210 Sum_probs=54.3
Q ss_pred cccCCcEEEEEccchhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHhcCcccccccccccCCCCccEEEEcCCC
Q 010101 363 SPIAGKIFVLVGAGGAGRALAFGAKSRGARVIIFNRNYERAKALADAVSGEALHFEYLHEFFPEKGMILANASAI 437 (518)
Q Consensus 363 ~~l~~k~vlvlGaGg~araia~~L~~~G~~v~i~nRt~~ka~~la~~~~~~~~~~~~l~~~~~~~~divInatp~ 437 (518)
..+++|++.|||.|-+|+++|..|...|++|.+++|. .+..+.++..+....++++ ...++|+|+...|.
T Consensus 12 ~~LkgKtVGIIG~GsIG~amA~nL~d~G~~ViV~~r~-~~s~~~A~~~G~~v~sl~E----aak~ADVV~llLPd 81 (335)
T PRK13403 12 ELLQGKTVAVIGYGSQGHAQAQNLRDSGVEVVVGVRP-GKSFEVAKADGFEVMSVSE----AVRTAQVVQMLLPD 81 (335)
T ss_pred hhhCcCEEEEEeEcHHHHHHHHHHHHCcCEEEEEECc-chhhHHHHHcCCEECCHHH----HHhcCCEEEEeCCC
Confidence 4578999999999999999999999999999999986 5555556655544333333 34578999988884
No 146
>PRK07634 pyrroline-5-carboxylate reductase; Reviewed
Probab=97.01 E-value=0.0015 Score=64.25 Aligned_cols=70 Identities=17% Similarity=0.161 Sum_probs=52.8
Q ss_pred CcEEEEEccchhHHHHHHHHHHCC---C-eEEEEeC-CHHHHHHHHHHhcCcccccccccccCCCCccEEEEcCCCCC
Q 010101 367 GKIFVLVGAGGAGRALAFGAKSRG---A-RVIIFNR-NYERAKALADAVSGEALHFEYLHEFFPEKGMILANASAIGM 439 (518)
Q Consensus 367 ~k~vlvlGaGg~araia~~L~~~G---~-~v~i~nR-t~~ka~~la~~~~~~~~~~~~l~~~~~~~~divInatp~g~ 439 (518)
+.++.|||+|.+|++++..|.+.| . +|++++| +.++++++++.++... ..+..+ ...++|+||.++|...
T Consensus 4 ~~kI~iIG~G~mg~ala~~l~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~--~~~~~~-~~~~~DiViiavp~~~ 78 (245)
T PRK07634 4 KHRILFIGAGRMAEAIFSGLLKTSKEYIEEIIVSNRSNVEKLDQLQARYNVST--TTDWKQ-HVTSVDTIVLAMPPSA 78 (245)
T ss_pred CCeEEEECcCHHHHHHHHHHHhCCCCCcCeEEEECCCCHHHHHHHHHHcCcEE--eCChHH-HHhcCCEEEEecCHHH
Confidence 468999999999999999998876 3 3888998 4788999988776432 122222 3456899999998753
No 147
>PRK13304 L-aspartate dehydrogenase; Reviewed
Probab=97.00 E-value=0.0013 Score=65.79 Aligned_cols=106 Identities=19% Similarity=0.200 Sum_probs=72.0
Q ss_pred EEEEEccchhHHHHHHHHHHC--CC-eEEEEeCCHHHHHHHHHHhcCcccccccccccCCCCccEEEEcCCCCCCCCCCC
Q 010101 369 IFVLVGAGGAGRALAFGAKSR--GA-RVIIFNRNYERAKALADAVSGEALHFEYLHEFFPEKGMILANASAIGMEPNSDQ 445 (518)
Q Consensus 369 ~vlvlGaGg~araia~~L~~~--G~-~v~i~nRt~~ka~~la~~~~~~~~~~~~l~~~~~~~~divInatp~g~~~~~~~ 445 (518)
++.|||.|.+|+.++.++.+. ++ -+.+++|+.++++++++.++... +.++++ ...+.|+|+.|+|.....
T Consensus 3 rIgIIG~G~iG~~ia~~l~~~~~~~elv~v~d~~~~~a~~~a~~~~~~~--~~~~~e-ll~~~DvVvi~a~~~~~~---- 75 (265)
T PRK13304 3 KIGIVGCGAIASLITKAILSGRINAELYAFYDRNLEKAENLASKTGAKA--CLSIDE-LVEDVDLVVECASVNAVE---- 75 (265)
T ss_pred EEEEECccHHHHHHHHHHHcCCCCeEEEEEECCCHHHHHHHHHhcCCee--ECCHHH-HhcCCCEEEEcCChHHHH----
Confidence 689999999999999999876 45 47799999999999988766432 233333 235789999998754321
Q ss_pred CCCChhhhcCCCEEEEEee----C-CCchHHHHHHHHCCCee
Q 010101 446 SPVPKEALKAYELVFDAVY----T-PRNTRLLREAAEVGATV 482 (518)
Q Consensus 446 ~~~~~~~l~~~~~v~Di~Y----~-P~~T~ll~~A~~~G~~~ 482 (518)
.+-...++.+.-|+.+.- . +....+.+.|++.|.++
T Consensus 76 -~~~~~al~~Gk~Vvv~s~gAl~d~~~~~~L~~aA~~~g~~l 116 (265)
T PRK13304 76 -EVVPKSLENGKDVIIMSVGALADKELFLKLYKLAKENNCKI 116 (265)
T ss_pred -HHHHHHHHcCCCEEEEchHHhcCHHHHHHHHHHHHHcCCEE
Confidence 122334555544555432 1 22357778889999763
No 148
>PRK05866 short chain dehydrogenase; Provisional
Probab=96.98 E-value=0.002 Score=65.24 Aligned_cols=48 Identities=35% Similarity=0.479 Sum_probs=43.0
Q ss_pred cccCCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHh
Q 010101 363 SPIAGKIFVLVGA-GGAGRALAFGAKSRGARVIIFNRNYERAKALADAV 410 (518)
Q Consensus 363 ~~l~~k~vlvlGa-Gg~araia~~L~~~G~~v~i~nRt~~ka~~la~~~ 410 (518)
..+.+++++|.|+ ||.|++++..|++.|++|.+++|+.++++++++.+
T Consensus 36 ~~~~~k~vlItGasggIG~~la~~La~~G~~Vi~~~R~~~~l~~~~~~l 84 (293)
T PRK05866 36 VDLTGKRILLTGASSGIGEAAAEQFARRGATVVAVARREDLLDAVADRI 84 (293)
T ss_pred cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHH
Confidence 4567899999997 78999999999999999999999999988887765
No 149
>TIGR00936 ahcY adenosylhomocysteinase. This enzyme hydrolyzes adenosylhomocysteine as part of a cycle for the regeneration of the methyl donor S-adenosylmethionine. Species that lack this enzyme are likely to have adenosylhomocysteine nucleosidase (EC 3.2.2.9), an enzyme which also acts as 5'-methyladenosine nucleosidase (see TIGR01704).
Probab=96.97 E-value=0.0017 Score=68.52 Aligned_cols=69 Identities=30% Similarity=0.350 Sum_probs=53.4
Q ss_pred cccCCcEEEEEccchhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHhcCcccccccccccCCCCccEEEEcCC
Q 010101 363 SPIAGKIFVLVGAGGAGRALAFGAKSRGARVIIFNRNYERAKALADAVSGEALHFEYLHEFFPEKGMILANASA 436 (518)
Q Consensus 363 ~~l~~k~vlvlGaGg~araia~~L~~~G~~v~i~nRt~~ka~~la~~~~~~~~~~~~l~~~~~~~~divInatp 436 (518)
..+.|++++|+|+|.+|+.++..+...|++|+++++++.++.+. ...+....+.++ ....+|++|.+|+
T Consensus 191 ~~l~Gk~VvViG~G~IG~~vA~~ak~~Ga~ViV~d~dp~r~~~A-~~~G~~v~~lee----al~~aDVVItaTG 259 (406)
T TIGR00936 191 LLIAGKTVVVAGYGWCGKGIAMRARGMGARVIVTEVDPIRALEA-AMDGFRVMTMEE----AAKIGDIFITATG 259 (406)
T ss_pred CCCCcCEEEEECCCHHHHHHHHHHhhCcCEEEEEeCChhhHHHH-HhcCCEeCCHHH----HHhcCCEEEECCC
Confidence 35789999999999999999999999999999999999886443 333443333332 3456899998874
No 150
>PF02737 3HCDH_N: 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain; InterPro: IPR006176 3-hydroxyacyl-CoA dehydrogenase (1.1.1.35 from EC) (HCDH) [] is an enzyme involved in fatty acid metabolism, it catalyzes the reduction of 3-hydroxyacyl-CoA to 3-oxoacyl-CoA. Most eukaryotic cells have 2 fatty-acid beta-oxidation systems, one located in mitochondria and the other in peroxisomes. In peroxisomes 3-hydroxyacyl-CoA dehydrogenase forms, with enoyl-CoA hydratase (ECH) and 3,2-trans-enoyl-CoA isomerase (ECI) a multifunctional enzyme where the N-terminal domain bears the hydratase/isomerase activities and the C-terminal domain the dehydrogenase activity. There are two mitochondrial enzymes: one which is monofunctional and the other which is, like its peroxisomal counterpart, multifunctional. In Escherichia coli (gene fadB) and Pseudomonas fragi (gene faoA) HCDH is part of a multifunctional enzyme which also contains an ECH/ECI domain as well as a 3-hydroxybutyryl-CoA epimerase domain []. There are two major regions of similarity in the sequences of proteins of the HCDH family, the first one located in the N-terminal, corresponds to the NAD-binding site, the second one is located in the centre of the sequence. This represents the C-terminal domain which is also found in lambda crystallin. Some proteins include two copies of this domain.; GO: 0003857 3-hydroxyacyl-CoA dehydrogenase activity, 0016491 oxidoreductase activity, 0006631 fatty acid metabolic process, 0055114 oxidation-reduction process; PDB: 3K6J_A 1ZCJ_A 2X58_A 1ZEJ_A 3HDH_B 2WTB_A 1WDL_B 2D3T_B 1WDK_A 1WDM_B ....
Probab=96.96 E-value=0.0018 Score=60.90 Aligned_cols=39 Identities=26% Similarity=0.381 Sum_probs=33.1
Q ss_pred EEEEEccchhHHHHHHHHHHCCCeEEEEeCCHHHHHHHH
Q 010101 369 IFVLVGAGGAGRALAFGAKSRGARVIIFNRNYERAKALA 407 (518)
Q Consensus 369 ~vlvlGaGg~araia~~L~~~G~~v~i~nRt~~ka~~la 407 (518)
+|.|+|+|-||+.++..++..|++|++++++++..++.-
T Consensus 1 ~V~ViGaG~mG~~iA~~~a~~G~~V~l~d~~~~~l~~~~ 39 (180)
T PF02737_consen 1 KVAVIGAGTMGRGIAALFARAGYEVTLYDRSPEALERAR 39 (180)
T ss_dssp EEEEES-SHHHHHHHHHHHHTTSEEEEE-SSHHHHHHHH
T ss_pred CEEEEcCCHHHHHHHHHHHhCCCcEEEEECChHHHHhhh
Confidence 588999999999999999999999999999998765543
No 151
>PRK06545 prephenate dehydrogenase; Validated
Probab=96.95 E-value=0.00084 Score=70.18 Aligned_cols=117 Identities=22% Similarity=0.214 Sum_probs=73.4
Q ss_pred cEEEEEccchhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHhcCcccc--cccccccCCCCccEEEEcCCCCCCCCCCC
Q 010101 368 KIFVLVGAGGAGRALAFGAKSRGARVIIFNRNYERAKALADAVSGEALH--FEYLHEFFPEKGMILANASAIGMEPNSDQ 445 (518)
Q Consensus 368 k~vlvlGaGg~araia~~L~~~G~~v~i~nRt~~ka~~la~~~~~~~~~--~~~l~~~~~~~~divInatp~g~~~~~~~ 445 (518)
+++.|||.|-+|.+++.+|.+.|.++.+++++.++.+ ++...+..... ..++.+ ...++|+||-|+|.......-.
T Consensus 1 ~~I~iIG~GliG~siA~~L~~~G~~v~i~~~~~~~~~-~~~a~~~~~~~~~~~~~~~-~~~~aDlVilavP~~~~~~vl~ 78 (359)
T PRK06545 1 RTVLIVGLGLIGGSLALAIKAAGPDVFIIGYDPSAAQ-LARALGFGVIDELAADLQR-AAAEADLIVLAVPVDATAALLA 78 (359)
T ss_pred CeEEEEEeCHHHHHHHHHHHhcCCCeEEEEeCCCHHH-HHHHhcCCCCcccccCHHH-HhcCCCEEEEeCCHHHHHHHHH
Confidence 3689999999999999999999998888998876543 33232221111 122233 3467999999999753211000
Q ss_pred CCCChhhhcCCCEEEEEeeCCCchHHHHHHHH---CCCeeeccHHHH
Q 010101 446 SPVPKEALKAYELVFDAVYTPRNTRLLREAAE---VGATVVSGVEMF 489 (518)
Q Consensus 446 ~~~~~~~l~~~~~v~Di~Y~P~~T~ll~~A~~---~G~~~i~G~~ml 489 (518)
.+....++++.+|.|+.... ...++.+++ .+.++++|-.|.
T Consensus 79 -~l~~~~l~~~~ivtDv~SvK--~~i~~~~~~~~~~~~~~ig~HPMa 122 (359)
T PRK06545 79 -ELADLELKPGVIVTDVGSVK--GAILAEAEALLGDLIRFVGGHPMA 122 (359)
T ss_pred -HHhhcCCCCCcEEEeCcccc--HHHHHHHHHhcCCCCeEEeeCCcC
Confidence 01111245678899987653 344455554 356788876665
No 152
>PRK06436 glycerate dehydrogenase; Provisional
Probab=96.95 E-value=0.0021 Score=65.51 Aligned_cols=67 Identities=19% Similarity=0.288 Sum_probs=47.1
Q ss_pred cccCCcEEEEEccchhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHhcCcccccccccccCCCCccEEEEcCCCC
Q 010101 363 SPIAGKIFVLVGAGGAGRALAFGAKSRGARVIIFNRNYERAKALADAVSGEALHFEYLHEFFPEKGMILANASAIG 438 (518)
Q Consensus 363 ~~l~~k~vlvlGaGg~araia~~L~~~G~~v~i~nRt~~ka~~la~~~~~~~~~~~~l~~~~~~~~divInatp~g 438 (518)
..+.||++.|+|.|.+|++++..|+..|++|..++|+.... +... .+.++++ ...++|+|+.+.|..
T Consensus 118 ~~L~gktvgIiG~G~IG~~vA~~l~afG~~V~~~~r~~~~~-------~~~~-~~~~l~e-ll~~aDiv~~~lp~t 184 (303)
T PRK06436 118 KLLYNKSLGILGYGGIGRRVALLAKAFGMNIYAYTRSYVND-------GISS-IYMEPED-IMKKSDFVLISLPLT 184 (303)
T ss_pred CCCCCCEEEEECcCHHHHHHHHHHHHCCCEEEEECCCCccc-------Cccc-ccCCHHH-HHhhCCEEEECCCCC
Confidence 35789999999999999999998888999999999984321 1100 0122333 345577777777753
No 153
>PRK07688 thiamine/molybdopterin biosynthesis ThiF/MoeB-like protein; Validated
Probab=96.95 E-value=0.0014 Score=67.92 Aligned_cols=37 Identities=32% Similarity=0.495 Sum_probs=33.8
Q ss_pred ccCCcEEEEEccchhHHHHHHHHHHCCC-eEEEEeCCH
Q 010101 364 PIAGKIFVLVGAGGAGRALAFGAKSRGA-RVIIFNRNY 400 (518)
Q Consensus 364 ~l~~k~vlvlGaGg~araia~~L~~~G~-~v~i~nRt~ 400 (518)
.+.+++|+|+|+||.|..++..|+..|+ +|+|++++.
T Consensus 21 ~L~~~~VlVvG~GglGs~va~~La~aGvg~i~lvD~D~ 58 (339)
T PRK07688 21 KLREKHVLIIGAGALGTANAEMLVRAGVGKVTIVDRDY 58 (339)
T ss_pred HhcCCcEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCc
Confidence 3567899999999999999999999999 999999873
No 154
>PRK05597 molybdopterin biosynthesis protein MoeB; Validated
Probab=96.94 E-value=0.0012 Score=68.92 Aligned_cols=71 Identities=14% Similarity=0.245 Sum_probs=52.3
Q ss_pred ccCCcEEEEEccchhHHHHHHHHHHCCC-eEEEEeCCH-------------------HHHHHHHHHhcCc--cccc----
Q 010101 364 PIAGKIFVLVGAGGAGRALAFGAKSRGA-RVIIFNRNY-------------------ERAKALADAVSGE--ALHF---- 417 (518)
Q Consensus 364 ~l~~k~vlvlGaGg~araia~~L~~~G~-~v~i~nRt~-------------------~ka~~la~~~~~~--~~~~---- 417 (518)
.+++++|+|+|+||.|..++..|+..|+ +++|++.+. .|++.+++.+..- .+.+
T Consensus 25 ~L~~~~VlivG~GGlGs~~a~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~diG~~Ka~~a~~~l~~~np~v~v~~~~ 104 (355)
T PRK05597 25 SLFDAKVAVIGAGGLGSPALLYLAGAGVGHITIIDDDTVDLSNLHRQVIHSTAGVGQPKAESAREAMLALNPDVKVTVSV 104 (355)
T ss_pred HHhCCeEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCEEcccccccCcccChhHCCChHHHHHHHHHHHHCCCcEEEEEE
Confidence 3567899999999999999999999999 999999764 5777777666421 1111
Q ss_pred -----ccccccCCCCccEEEEcC
Q 010101 418 -----EYLHEFFPEKGMILANAS 435 (518)
Q Consensus 418 -----~~l~~~~~~~~divInat 435 (518)
++..+ .+.++|+||+|+
T Consensus 105 ~~i~~~~~~~-~~~~~DvVvd~~ 126 (355)
T PRK05597 105 RRLTWSNALD-ELRDADVILDGS 126 (355)
T ss_pred eecCHHHHHH-HHhCCCEEEECC
Confidence 11112 246799999997
No 155
>PLN02712 arogenate dehydrogenase
Probab=96.93 E-value=0.0014 Score=73.84 Aligned_cols=117 Identities=18% Similarity=0.189 Sum_probs=75.5
Q ss_pred CCcEEEEEccchhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHhcCcccccccccccCCCCccEEEEcCCCCCCCCCCC
Q 010101 366 AGKIFVLVGAGGAGRALAFGAKSRGARVIIFNRNYERAKALADAVSGEALHFEYLHEFFPEKGMILANASAIGMEPNSDQ 445 (518)
Q Consensus 366 ~~k~vlvlGaGg~araia~~L~~~G~~v~i~nRt~~ka~~la~~~~~~~~~~~~l~~~~~~~~divInatp~g~~~~~~~ 445 (518)
+.+++.|||.|.+|++++.+|.+.|.+|++++|+..+ +.+..++... ..+..+....++|+||-|+|+......-.
T Consensus 51 ~~~kIgIIG~G~mG~slA~~L~~~G~~V~~~dr~~~~--~~A~~~Gv~~--~~d~~e~~~~~aDvViLavP~~~~~~vl~ 126 (667)
T PLN02712 51 TQLKIAIIGFGNYGQFLAKTLISQGHTVLAHSRSDHS--LAARSLGVSF--FLDPHDLCERHPDVILLCTSIISTENVLK 126 (667)
T ss_pred CCCEEEEEccCHHHHHHHHHHHHCCCEEEEEeCCHHH--HHHHHcCCEE--eCCHHHHhhcCCCEEEEcCCHHHHHHHHH
Confidence 4578999999999999999999999999999999554 3455665332 22222212235899999999753221100
Q ss_pred CCCChhhhcCCCEEEEEeeCCCchHHHHHHHH---CCCeeeccHHHH
Q 010101 446 SPVPKEALKAYELVFDAVYTPRNTRLLREAAE---VGATVVSGVEMF 489 (518)
Q Consensus 446 ~~~~~~~l~~~~~v~Di~Y~P~~T~ll~~A~~---~G~~~i~G~~ml 489 (518)
.+....++++.+|+|+... .+..++..++ .|+.++.+-.|+
T Consensus 127 -~l~~~~l~~g~iVvDv~Sv--K~~~~~~l~~~l~~~~~~v~~HPMa 170 (667)
T PLN02712 127 -SLPLQRLKRNTLFVDVLSV--KEFAKNLLLDYLPEDFDIICSHPMF 170 (667)
T ss_pred -hhhhhcCCCCeEEEECCCC--cHHHHHHHHHhcCCCCeEEeeCCcC
Confidence 0111235677899999633 4444444443 366777777776
No 156
>cd01487 E1_ThiF_like E1_ThiF_like. Member of superfamily of activating enzymes (E1) of the ubiquitin-like proteins. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown.
Probab=96.91 E-value=0.0017 Score=60.74 Aligned_cols=32 Identities=22% Similarity=0.348 Sum_probs=30.1
Q ss_pred EEEEEccchhHHHHHHHHHHCCC-eEEEEeCCH
Q 010101 369 IFVLVGAGGAGRALAFGAKSRGA-RVIIFNRNY 400 (518)
Q Consensus 369 ~vlvlGaGg~araia~~L~~~G~-~v~i~nRt~ 400 (518)
+|+|+|+||+|..++..|+..|+ ++++++++.
T Consensus 1 ~VlViG~GglGs~ia~~La~~Gvg~i~lvD~D~ 33 (174)
T cd01487 1 KVGIAGAGGLGSNIAVLLARSGVGNLKLVDFDV 33 (174)
T ss_pred CEEEECcCHHHHHHHHHHHHcCCCeEEEEeCCE
Confidence 48999999999999999999999 899999975
No 157
>TIGR02354 thiF_fam2 thiamine biosynthesis protein ThiF, family 2. Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with one the E. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the divergent clade of putative ThiF proteins such found in Campylobacter.
Probab=96.91 E-value=0.0017 Score=62.17 Aligned_cols=36 Identities=19% Similarity=0.448 Sum_probs=33.6
Q ss_pred ccCCcEEEEEccchhHHHHHHHHHHCCC-eEEEEeCC
Q 010101 364 PIAGKIFVLVGAGGAGRALAFGAKSRGA-RVIIFNRN 399 (518)
Q Consensus 364 ~l~~k~vlvlGaGg~araia~~L~~~G~-~v~i~nRt 399 (518)
.++.++|+|+|+||+|..++..|+..|+ +|++++++
T Consensus 18 ~L~~~~V~IvG~GglGs~ia~~La~~Gvg~i~lvD~D 54 (200)
T TIGR02354 18 KLEQATVAICGLGGLGSNVAINLARAGIGKLILVDFD 54 (200)
T ss_pred HHhCCcEEEECcCHHHHHHHHHHHHcCCCEEEEECCC
Confidence 4667899999999999999999999999 89999988
No 158
>PLN02712 arogenate dehydrogenase
Probab=96.91 E-value=0.00082 Score=75.61 Aligned_cols=121 Identities=17% Similarity=0.186 Sum_probs=73.5
Q ss_pred ccCCcEEEEEccchhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHhcCcccccccccccCCCCccEEEEcCCCCCCCCC
Q 010101 364 PIAGKIFVLVGAGGAGRALAFGAKSRGARVIIFNRNYERAKALADAVSGEALHFEYLHEFFPEKGMILANASAIGMEPNS 443 (518)
Q Consensus 364 ~l~~k~vlvlGaGg~araia~~L~~~G~~v~i~nRt~~ka~~la~~~~~~~~~~~~l~~~~~~~~divInatp~g~~~~~ 443 (518)
.+.++++.|||.|.+|++++.+|.+.|.+|++++|+... +.+.+++... ..++.+.....+|+||-|+|+......
T Consensus 366 ~~~~~kIgIIGlG~mG~slA~~L~~~G~~V~~~dr~~~~--~~a~~~Gv~~--~~~~~el~~~~aDvVILavP~~~~~~v 441 (667)
T PLN02712 366 DGSKLKIAIVGFGNFGQFLAKTMVKQGHTVLAYSRSDYS--DEAQKLGVSY--FSDADDLCEEHPEVILLCTSILSTEKV 441 (667)
T ss_pred CCCCCEEEEEecCHHHHHHHHHHHHCcCEEEEEECChHH--HHHHHcCCeE--eCCHHHHHhcCCCEEEECCChHHHHHH
Confidence 356789999999999999999999999999999999653 2344555321 222222111247999999996532210
Q ss_pred CCCCCChhhhcCCCEEEEEeeCCC-chHHHHHHHHCCCeeeccHHHH
Q 010101 444 DQSPVPKEALKAYELVFDAVYTPR-NTRLLREAAEVGATVVSGVEMF 489 (518)
Q Consensus 444 ~~~~~~~~~l~~~~~v~Di~Y~P~-~T~ll~~A~~~G~~~i~G~~ml 489 (518)
-. .+....++++.+++|+...-. ....++.....|+.++.+-.|+
T Consensus 442 i~-~l~~~~lk~g~ivvDv~SvK~~~~~~~~~~l~~~~~~v~~HPm~ 487 (667)
T PLN02712 442 LK-SLPFQRLKRSTLFVDVLSVKEFPRNLFLQHLPQDFDILCTHPMF 487 (667)
T ss_pred HH-HHHHhcCCCCcEEEECCCccHHHHHHHHHhccCCCceEeeCCCC
Confidence 00 011123567789999976521 1222233333466666444443
No 159
>PRK05872 short chain dehydrogenase; Provisional
Probab=96.86 E-value=0.0034 Score=63.56 Aligned_cols=49 Identities=33% Similarity=0.516 Sum_probs=44.6
Q ss_pred cccCCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHhc
Q 010101 363 SPIAGKIFVLVGA-GGAGRALAFGAKSRGARVIIFNRNYERAKALADAVS 411 (518)
Q Consensus 363 ~~l~~k~vlvlGa-Gg~araia~~L~~~G~~v~i~nRt~~ka~~la~~~~ 411 (518)
.++++++++|.|+ ||.|++++..|.+.|++|.+++|+.+++++++++++
T Consensus 5 ~~l~gk~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~l~~~~~~l~ 54 (296)
T PRK05872 5 TSLAGKVVVVTGAARGIGAELARRLHARGAKLALVDLEEAELAALAAELG 54 (296)
T ss_pred CCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhc
Confidence 3578899999997 789999999999999999999999999999988875
No 160
>PRK15438 erythronate-4-phosphate dehydrogenase PdxB; Provisional
Probab=96.85 E-value=0.0048 Score=64.63 Aligned_cols=67 Identities=18% Similarity=0.259 Sum_probs=48.1
Q ss_pred cccCCcEEEEEccchhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHhcCcccccccccccCCCCccEEEEcCCCC
Q 010101 363 SPIAGKIFVLVGAGGAGRALAFGAKSRGARVIIFNRNYERAKALADAVSGEALHFEYLHEFFPEKGMILANASAIG 438 (518)
Q Consensus 363 ~~l~~k~vlvlGaGg~araia~~L~~~G~~v~i~nRt~~ka~~la~~~~~~~~~~~~l~~~~~~~~divInatp~g 438 (518)
..+.||++.|||.|.+|+.++..|...|++|..+++..... ... ..+.++++ .+.++|+|+..+|..
T Consensus 112 ~~L~gktvGIIG~G~IG~~vA~~l~a~G~~V~~~dp~~~~~-----~~~---~~~~~L~e-ll~~sDiI~lh~PLt 178 (378)
T PRK15438 112 FSLHDRTVGIVGVGNVGRRLQARLEALGIKTLLCDPPRADR-----GDE---GDFRSLDE-LVQEADILTFHTPLF 178 (378)
T ss_pred CCcCCCEEEEECcCHHHHHHHHHHHHCCCEEEEECCccccc-----ccc---cccCCHHH-HHhhCCEEEEeCCCC
Confidence 57899999999999999999999999999999999753211 000 11223333 345678888877754
No 161
>PRK09260 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=96.84 E-value=0.002 Score=65.18 Aligned_cols=41 Identities=24% Similarity=0.399 Sum_probs=37.5
Q ss_pred cEEEEEccchhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHH
Q 010101 368 KIFVLVGAGGAGRALAFGAKSRGARVIIFNRNYERAKALAD 408 (518)
Q Consensus 368 k~vlvlGaGg~araia~~L~~~G~~v~i~nRt~~ka~~la~ 408 (518)
++|.|||+|-+|++++..|++.|++|++++|++++.+++.+
T Consensus 2 ~~V~VIG~G~mG~~iA~~la~~G~~V~~~d~~~~~~~~~~~ 42 (288)
T PRK09260 2 EKLVVVGAGVMGRGIAYVFAVSGFQTTLVDIKQEQLESAQQ 42 (288)
T ss_pred cEEEEECccHHHHHHHHHHHhCCCcEEEEeCCHHHHHHHHH
Confidence 47999999999999999999999999999999998887654
No 162
>PRK00421 murC UDP-N-acetylmuramate--L-alanine ligase; Provisional
Probab=96.84 E-value=0.0055 Score=66.22 Aligned_cols=97 Identities=22% Similarity=0.171 Sum_probs=59.7
Q ss_pred cCCcEEEEEccchhHHH-HHHHHHHCCCeEEEEeCCHHH-HHHHHHHhcCcccccccccccCCCCccEEEEcCCCCCCCC
Q 010101 365 IAGKIFVLVGAGGAGRA-LAFGAKSRGARVIIFNRNYER-AKALADAVSGEALHFEYLHEFFPEKGMILANASAIGMEPN 442 (518)
Q Consensus 365 l~~k~vlvlGaGg~ara-ia~~L~~~G~~v~i~nRt~~k-a~~la~~~~~~~~~~~~l~~~~~~~~divInatp~g~~~~ 442 (518)
.++++++|+|.|++|++ ++..|.++|++|++.++.... .++|. ..+..... ..-.+ .+.++|+||- ++|.
T Consensus 5 ~~~~~v~viG~G~sG~s~~a~~L~~~G~~V~~~D~~~~~~~~~l~-~~gi~~~~-~~~~~-~~~~~d~vv~--spgi--- 76 (461)
T PRK00421 5 RRIKRIHFVGIGGIGMSGLAEVLLNLGYKVSGSDLKESAVTQRLL-ELGAIIFI-GHDAE-NIKDADVVVY--SSAI--- 76 (461)
T ss_pred CCCCEEEEEEEchhhHHHHHHHHHhCCCeEEEECCCCChHHHHHH-HCCCEEeC-CCCHH-HCCCCCEEEE--CCCC---
Confidence 35689999999999999 699999999999999976432 22221 11211100 00000 1123444442 1121
Q ss_pred CCCCCCChhhhcCCCEEEEEeeCCCchHHHHHHHHCCCeeeccHHHHHHH
Q 010101 443 SDQSPVPKEALKAYELVFDAVYTPRNTRLLREAAEVGATVVSGVEMFIRQ 492 (518)
Q Consensus 443 ~~~~~~~~~~l~~~~~v~Di~Y~P~~T~ll~~A~~~G~~~i~G~~ml~~Q 492 (518)
|...|.+++|+++|++++...+++...
T Consensus 77 -----------------------~~~~~~~~~a~~~~i~i~~~~e~~~~~ 103 (461)
T PRK00421 77 -----------------------PDDNPELVAARELGIPVVRRAEMLAEL 103 (461)
T ss_pred -----------------------CCCCHHHHHHHHCCCcEEeHHHHHHHH
Confidence 234567888888999998888886543
No 163
>TIGR01692 HIBADH 3-hydroxyisobutyrate dehydrogenase. This enzyme belongs to the 3-hydroxyacid dehydrogenase family, sharing a common evolutionary origin and enzymatic mechanism with 6-phosphogluconate. HIBADH exhibits sequence similarity to the NAD binding domain of 6-phosphogluconate dehydrogenase above trusted (pfam03446).
Probab=96.84 E-value=0.0015 Score=66.09 Aligned_cols=107 Identities=18% Similarity=0.136 Sum_probs=71.0
Q ss_pred EEccchhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHhcCcccccccccccCCCCccEEEEcCCCCCCCCCCCCCC--C
Q 010101 372 LVGAGGAGRALAFGAKSRGARVIIFNRNYERAKALADAVSGEALHFEYLHEFFPEKGMILANASAIGMEPNSDQSPV--P 449 (518)
Q Consensus 372 vlGaGg~araia~~L~~~G~~v~i~nRt~~ka~~la~~~~~~~~~~~~l~~~~~~~~divInatp~g~~~~~~~~~~--~ 449 (518)
|||.|-||.+++..|.+.|.+|+++||+.++.+.+.+. +... ..+..+ ...++|+||-+.|.... ...... .
T Consensus 1 ~IGlG~mG~~mA~~L~~~G~~V~v~dr~~~~~~~l~~~-g~~~--~~s~~~-~~~~advVil~vp~~~~--~~~v~~g~~ 74 (288)
T TIGR01692 1 FIGLGNMGGPMAANLLKAGHPVRVFDLFPDAVEEAVAA-GAQA--AASPAE-AAEGADRVITMLPAGQH--VISVYSGDE 74 (288)
T ss_pred CCcccHhHHHHHHHHHhCCCeEEEEeCCHHHHHHHHHc-CCee--cCCHHH-HHhcCCEEEEeCCChHH--HHHHHcCcc
Confidence 58999999999999999999999999999998887653 3221 112222 34568999999885321 011000 0
Q ss_pred --hhhhcCCCEEEEEeeCCC-chHH-HHHHHHCCCeeec
Q 010101 450 --KEALKAYELVFDAVYTPR-NTRL-LREAAEVGATVVS 484 (518)
Q Consensus 450 --~~~l~~~~~v~Di~Y~P~-~T~l-l~~A~~~G~~~i~ 484 (518)
...+.++.+++|+..... .+.. -+.++++|+.+++
T Consensus 75 ~l~~~~~~g~~vid~st~~p~~~~~~~~~~~~~g~~~vd 113 (288)
T TIGR01692 75 GILPKVAKGSLLIDCSTIDPDSARKLAELAAAHGAVFMD 113 (288)
T ss_pred hHhhcCCCCCEEEECCCCCHHHHHHHHHHHHHcCCcEEE
Confidence 112466789999987643 3333 3455678877666
No 164
>PRK12480 D-lactate dehydrogenase; Provisional
Probab=96.84 E-value=0.0023 Score=66.07 Aligned_cols=115 Identities=17% Similarity=0.185 Sum_probs=75.9
Q ss_pred ccCCcEEEEEccchhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHhcCcccccccccccCCCCccEEEEcCCCCCCCCC
Q 010101 364 PIAGKIFVLVGAGGAGRALAFGAKSRGARVIIFNRNYERAKALADAVSGEALHFEYLHEFFPEKGMILANASAIGMEPNS 443 (518)
Q Consensus 364 ~l~~k~vlvlGaGg~araia~~L~~~G~~v~i~nRt~~ka~~la~~~~~~~~~~~~l~~~~~~~~divInatp~g~~~~~ 443 (518)
.+.|+++.|||.|.+|++++..|...|++|+.++|+.+......+ . ..++.+ ...++|+|+.++|..-. +
T Consensus 143 ~l~g~~VgIIG~G~IG~~vA~~L~~~G~~V~~~d~~~~~~~~~~~-----~--~~~l~e-ll~~aDiVil~lP~t~~--t 212 (330)
T PRK12480 143 PVKNMTVAIIGTGRIGAATAKIYAGFGATITAYDAYPNKDLDFLT-----Y--KDSVKE-AIKDADIISLHVPANKE--S 212 (330)
T ss_pred ccCCCEEEEECCCHHHHHHHHHHHhCCCEEEEEeCChhHhhhhhh-----c--cCCHHH-HHhcCCEEEEeCCCcHH--H
Confidence 567899999999999999999999999999999999765332111 1 112333 45678999999886421 0
Q ss_pred CCCCCChh---hhcCCCEEEEEeeCCC-chHHHHHHHHCCCeeeccHHHH
Q 010101 444 DQSPVPKE---ALKAYELVFDAVYTPR-NTRLLREAAEVGATVVSGVEMF 489 (518)
Q Consensus 444 ~~~~~~~~---~l~~~~~v~Di~Y~P~-~T~ll~~A~~~G~~~i~G~~ml 489 (518)
...+... .++++.+++++.=.+. .+.-+.+|-+.|.-.--|++.+
T Consensus 213 -~~li~~~~l~~mk~gavlIN~aRG~~vd~~aL~~aL~~g~i~gaalDV~ 261 (330)
T PRK12480 213 -YHLFDKAMFDHVKKGAILVNAARGAVINTPDLIAAVNDGTLLGAAIDTY 261 (330)
T ss_pred -HHHHhHHHHhcCCCCcEEEEcCCccccCHHHHHHHHHcCCeeEEEEecc
Confidence 1112222 2466778888776554 4665666666665444455554
No 165
>PF13241 NAD_binding_7: Putative NAD(P)-binding; PDB: 3DFZ_B 1PJT_A 1PJS_A 1PJQ_A 1KYQ_B.
Probab=96.84 E-value=0.0025 Score=54.24 Aligned_cols=67 Identities=18% Similarity=0.168 Sum_probs=44.3
Q ss_pred cccCCcEEEEEccchhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHhcCcccccccccccCCCCccEEEEcCC
Q 010101 363 SPIAGKIFVLVGAGGAGRALAFGAKSRGARVIIFNRNYERAKALADAVSGEALHFEYLHEFFPEKGMILANASA 436 (518)
Q Consensus 363 ~~l~~k~vlvlGaGg~araia~~L~~~G~~v~i~nRt~~ka~~la~~~~~~~~~~~~l~~~~~~~~divInatp 436 (518)
.+++|++++|+|+|.+|..-+..|.+.|++|+|++.+.+..+ +.+. . .-.+.++ .+.++++|+-||.
T Consensus 3 l~l~~~~vlVvGgG~va~~k~~~Ll~~gA~v~vis~~~~~~~---~~i~--~-~~~~~~~-~l~~~~lV~~at~ 69 (103)
T PF13241_consen 3 LDLKGKRVLVVGGGPVAARKARLLLEAGAKVTVISPEIEFSE---GLIQ--L-IRREFEE-DLDGADLVFAATD 69 (103)
T ss_dssp E--TT-EEEEEEESHHHHHHHHHHCCCTBEEEEEESSEHHHH---TSCE--E-EESS-GG-GCTTESEEEE-SS
T ss_pred EEcCCCEEEEECCCHHHHHHHHHHHhCCCEEEEECCchhhhh---hHHH--H-HhhhHHH-HHhhheEEEecCC
Confidence 357899999999999999999999999999999999962111 1111 0 0011222 3566889998874
No 166
>PRK12491 pyrroline-5-carboxylate reductase; Reviewed
Probab=96.84 E-value=0.0023 Score=64.21 Aligned_cols=119 Identities=13% Similarity=0.156 Sum_probs=74.5
Q ss_pred cEEEEEccchhHHHHHHHHHHCCC----eEEEEeCCHHHHHHHHHHhcCcccccccccccCCCCccEEEEcCCCCCCCCC
Q 010101 368 KIFVLVGAGGAGRALAFGAKSRGA----RVIIFNRNYERAKALADAVSGEALHFEYLHEFFPEKGMILANASAIGMEPNS 443 (518)
Q Consensus 368 k~vlvlGaGg~araia~~L~~~G~----~v~i~nRt~~ka~~la~~~~~~~~~~~~l~~~~~~~~divInatp~g~~~~~ 443 (518)
.++.|||+|-||.+++..|.+.|. +|++++|+.++++.+++.++... ..+..+ ...++|+||-|+++.....
T Consensus 3 ~~IgfIG~G~MG~aia~~L~~~g~~~~~~I~v~~r~~~~~~~l~~~~g~~~--~~~~~e-~~~~aDiIiLavkP~~~~~- 78 (272)
T PRK12491 3 KQIGFIGCGNMGIAMIGGMINKNIVSPDQIICSDLNVSNLKNASDKYGITI--TTNNNE-VANSADILILSIKPDLYSS- 78 (272)
T ss_pred CeEEEECccHHHHHHHHHHHHCCCCCCceEEEECCCHHHHHHHHHhcCcEE--eCCcHH-HHhhCCEEEEEeChHHHHH-
Confidence 479999999999999999998873 69999999999998887776432 122222 2356899999987542211
Q ss_pred CCCCCCh--hhhcCCCEEEEEeeCCCchHHHHHHHHCC---CeeeccHHHHHHHHH
Q 010101 444 DQSPVPK--EALKAYELVFDAVYTPRNTRLLREAAEVG---ATVVSGVEMFIRQAL 494 (518)
Q Consensus 444 ~~~~~~~--~~l~~~~~v~Di~Y~P~~T~ll~~A~~~G---~~~i~G~~ml~~Qa~ 494 (518)
.+.. ..++++.+++|+.-.= ...-++..-... .++++=....+.++.
T Consensus 79 ---vl~~l~~~~~~~~lvISi~AGi-~i~~l~~~l~~~~~vvR~MPN~~~~vg~g~ 130 (272)
T PRK12491 79 ---VINQIKDQIKNDVIVVTIAAGK-SIKSTENEFDRKLKVIRVMPNTPVLVGEGM 130 (272)
T ss_pred ---HHHHHHHhhcCCcEEEEeCCCC-cHHHHHHhcCCCCcEEEECCChHHHHcCce
Confidence 0111 1245567888887542 222233322111 235555555555543
No 167
>PRK00257 erythronate-4-phosphate dehydrogenase; Validated
Probab=96.84 E-value=0.004 Score=65.40 Aligned_cols=38 Identities=24% Similarity=0.363 Sum_probs=35.1
Q ss_pred cccCCcEEEEEccchhHHHHHHHHHHCCCeEEEEeCCH
Q 010101 363 SPIAGKIFVLVGAGGAGRALAFGAKSRGARVIIFNRNY 400 (518)
Q Consensus 363 ~~l~~k~vlvlGaGg~araia~~L~~~G~~v~i~nRt~ 400 (518)
..+.||++.|||.|.+|+.++..|...|++|.++++..
T Consensus 112 ~~l~gktvGIIG~G~IG~~va~~l~a~G~~V~~~Dp~~ 149 (381)
T PRK00257 112 VDLAERTYGVVGAGHVGGRLVRVLRGLGWKVLVCDPPR 149 (381)
T ss_pred CCcCcCEEEEECCCHHHHHHHHHHHHCCCEEEEECCcc
Confidence 56889999999999999999999999999999999854
No 168
>PRK15059 tartronate semialdehyde reductase; Provisional
Probab=96.83 E-value=0.0021 Score=65.31 Aligned_cols=109 Identities=17% Similarity=0.206 Sum_probs=70.0
Q ss_pred EEEEEccchhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHhcCcccccccccccCCCCccEEEEcCCCCCCCCCCCCCC
Q 010101 369 IFVLVGAGGAGRALAFGAKSRGARVIIFNRNYERAKALADAVSGEALHFEYLHEFFPEKGMILANASAIGMEPNSDQSPV 448 (518)
Q Consensus 369 ~vlvlGaGg~araia~~L~~~G~~v~i~nRt~~ka~~la~~~~~~~~~~~~l~~~~~~~~divInatp~g~~~~~~~~~~ 448 (518)
++.|||.|-||.+++..|.+.|++|+++||++. ++++++ .+... ..+..+ ...++|+||-+.|-. +.......
T Consensus 2 ~Ig~IGlG~MG~~ma~~L~~~G~~v~v~~~~~~-~~~~~~-~g~~~--~~s~~~-~~~~advVi~~v~~~--~~v~~v~~ 74 (292)
T PRK15059 2 KLGFIGLGIMGTPMAINLARAGHQLHVTTIGPV-ADELLS-LGAVS--VETARQ-VTEASDIIFIMVPDT--PQVEEVLF 74 (292)
T ss_pred eEEEEccCHHHHHHHHHHHHCCCeEEEEeCCHh-HHHHHH-cCCee--cCCHHH-HHhcCCEEEEeCCCh--HHHHHHHc
Confidence 588999999999999999999999999999974 555543 33322 112212 235689999888743 11111001
Q ss_pred Ch----hhhcCCCEEEEEeeC-CCchH-HHHHHHHCCCeeec
Q 010101 449 PK----EALKAYELVFDAVYT-PRNTR-LLREAAEVGATVVS 484 (518)
Q Consensus 449 ~~----~~l~~~~~v~Di~Y~-P~~T~-ll~~A~~~G~~~i~ 484 (518)
.. ..+.++.+++|+... |..+. +-+.++++|+.+++
T Consensus 75 ~~~g~~~~~~~g~ivvd~sT~~p~~~~~~~~~~~~~G~~~vd 116 (292)
T PRK15059 75 GENGCTKASLKGKTIVDMSSISPIETKRFARQVNELGGDYLD 116 (292)
T ss_pred CCcchhccCCCCCEEEECCCCCHHHHHHHHHHHHHcCCCEEE
Confidence 11 124567899999876 44343 44666778876555
No 169
>TIGR01470 cysG_Nterm siroheme synthase, N-terminal domain. This model represents a subfamily of CysG N-terminal region-related sequences. All sequences in the seed alignment for this model are N-terminal regions of known or predicted siroheme synthases. The C-terminal region of each is uroporphyrin-III C-methyltransferase (EC 2.1.1.107), which catalyzes the first step committed to the biosynthesis of either siroheme or cobalamin (vitamin B12) rather than protoheme (heme). The region represented by this model completes the process of oxidation and iron insertion to yield siroheme. Siroheme is a cofactor for nitrite and sulfite reductases, so siroheme synthase is CysG of cysteine biosynthesis in some organisms.
Probab=96.83 E-value=0.0026 Score=61.12 Aligned_cols=74 Identities=18% Similarity=0.188 Sum_probs=50.6
Q ss_pred cccCCcEEEEEccchhHHHHHHHHHHCCCeEEEEeCCHH-HHHHHHHHhcCcccccccccccCCCCccEEEEcCCC
Q 010101 363 SPIAGKIFVLVGAGGAGRALAFGAKSRGARVIIFNRNYE-RAKALADAVSGEALHFEYLHEFFPEKGMILANASAI 437 (518)
Q Consensus 363 ~~l~~k~vlvlGaGg~araia~~L~~~G~~v~i~nRt~~-ka~~la~~~~~~~~~~~~l~~~~~~~~divInatp~ 437 (518)
.+++|++++|+|+|.+|..-+..|.+.|++|+|++.+.. ..+++++..+..++. .+.....+.++++||-||..
T Consensus 5 l~l~gk~vlVvGgG~va~rk~~~Ll~~ga~VtVvsp~~~~~l~~l~~~~~i~~~~-~~~~~~dl~~~~lVi~at~d 79 (205)
T TIGR01470 5 ANLEGRAVLVVGGGDVALRKARLLLKAGAQLRVIAEELESELTLLAEQGGITWLA-RCFDADILEGAFLVIAATDD 79 (205)
T ss_pred EEcCCCeEEEECcCHHHHHHHHHHHHCCCEEEEEcCCCCHHHHHHHHcCCEEEEe-CCCCHHHhCCcEEEEECCCC
Confidence 467899999999999999999999999999999998754 445565542221110 01111023567888877753
No 170
>PRK08605 D-lactate dehydrogenase; Validated
Probab=96.83 E-value=0.0019 Score=66.75 Aligned_cols=117 Identities=15% Similarity=0.141 Sum_probs=77.6
Q ss_pred cccCCcEEEEEccchhHHHHHHHH-HHCCCeEEEEeCCHHHHHHHHHHhcCcccccccccccCCCCccEEEEcCCCCCCC
Q 010101 363 SPIAGKIFVLVGAGGAGRALAFGA-KSRGARVIIFNRNYERAKALADAVSGEALHFEYLHEFFPEKGMILANASAIGMEP 441 (518)
Q Consensus 363 ~~l~~k~vlvlGaGg~araia~~L-~~~G~~v~i~nRt~~ka~~la~~~~~~~~~~~~l~~~~~~~~divInatp~g~~~ 441 (518)
..+.|+++.|||.|.+|++++..| ...|++|+.++|+..+.. .. . ... ..++.+ .+.++|+|+.++|..-.
T Consensus 142 ~~l~g~~VgIIG~G~IG~~vA~~L~~~~g~~V~~~d~~~~~~~--~~-~-~~~--~~~l~e-ll~~aDvIvl~lP~t~~- 213 (332)
T PRK08605 142 RSIKDLKVAVIGTGRIGLAVAKIFAKGYGSDVVAYDPFPNAKA--AT-Y-VDY--KDTIEE-AVEGADIVTLHMPATKY- 213 (332)
T ss_pred ceeCCCEEEEECCCHHHHHHHHHHHhcCCCEEEEECCCccHhH--Hh-h-ccc--cCCHHH-HHHhCCEEEEeCCCCcc-
Confidence 357899999999999999999999 456889999999865431 11 1 111 123333 34678999999986422
Q ss_pred CCCCCCCCh---hhhcCCCEEEEEeeCC-CchHHHHHHHHCCCeeeccHHHH
Q 010101 442 NSDQSPVPK---EALKAYELVFDAVYTP-RNTRLLREAAEVGATVVSGVEMF 489 (518)
Q Consensus 442 ~~~~~~~~~---~~l~~~~~v~Di~Y~P-~~T~ll~~A~~~G~~~i~G~~ml 489 (518)
....+.. +.++++.+++++.=.+ ..|.-+..|-+.|.-.--|++.+
T Consensus 214 --t~~li~~~~l~~mk~gailIN~sRG~~vd~~aL~~aL~~g~i~gaalDV~ 263 (332)
T PRK08605 214 --NHYLFNADLFKHFKKGAVFVNCARGSLVDTKALLDALDNGLIKGAALDTY 263 (332)
T ss_pred --hhhhcCHHHHhcCCCCcEEEECCCCcccCHHHHHHHHHhCCeeEEEEecc
Confidence 1122333 2357788999998764 36777777777766544455544
No 171
>COG2085 Predicted dinucleotide-binding enzymes [General function prediction only]
Probab=96.80 E-value=0.0021 Score=61.24 Aligned_cols=89 Identities=24% Similarity=0.214 Sum_probs=60.3
Q ss_pred cEEEEEccchhHHHHHHHHHHCCCeEEEEeCCHHH-HHHHHHHhcCcccccccccccCCCCccEEEEcCCCCCCCCCCCC
Q 010101 368 KIFVLVGAGGAGRALAFGAKSRGARVIIFNRNYER-AKALADAVSGEALHFEYLHEFFPEKGMILANASAIGMEPNSDQS 446 (518)
Q Consensus 368 k~vlvlGaGg~araia~~L~~~G~~v~i~nRt~~k-a~~la~~~~~~~~~~~~l~~~~~~~~divInatp~g~~~~~~~~ 446 (518)
+++.|+|+|-+|.+++..+.+.|++|.|-+|..++ .+..++.++......+ ..+ ....+|+|+-|+|--..+.
T Consensus 2 ~~~~i~GtGniG~alA~~~a~ag~eV~igs~r~~~~~~a~a~~l~~~i~~~~-~~d-A~~~aDVVvLAVP~~a~~~---- 75 (211)
T COG2085 2 MIIAIIGTGNIGSALALRLAKAGHEVIIGSSRGPKALAAAAAALGPLITGGS-NED-AAALADVVVLAVPFEAIPD---- 75 (211)
T ss_pred cEEEEeccChHHHHHHHHHHhCCCeEEEecCCChhHHHHHHHhhccccccCC-hHH-HHhcCCEEEEeccHHHHHh----
Confidence 47899999999999999999999999999776655 4455666654422221 122 3456899999998644332
Q ss_pred CCChhhh--cCCCEEEEEe
Q 010101 447 PVPKEAL--KAYELVFDAV 463 (518)
Q Consensus 447 ~~~~~~l--~~~~~v~Di~ 463 (518)
+..+.. ..+++|+|..
T Consensus 76 -v~~~l~~~~~~KIvID~t 93 (211)
T COG2085 76 -VLAELRDALGGKIVIDAT 93 (211)
T ss_pred -HHHHHHHHhCCeEEEecC
Confidence 112211 2368888875
No 172
>PRK14618 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Provisional
Probab=96.80 E-value=0.0027 Score=65.44 Aligned_cols=113 Identities=22% Similarity=0.100 Sum_probs=71.5
Q ss_pred cEEEEEccchhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHh-------cCc----ccccccccccCCCCccEEEEcCC
Q 010101 368 KIFVLVGAGGAGRALAFGAKSRGARVIIFNRNYERAKALADAV-------SGE----ALHFEYLHEFFPEKGMILANASA 436 (518)
Q Consensus 368 k~vlvlGaGg~araia~~L~~~G~~v~i~nRt~~ka~~la~~~-------~~~----~~~~~~l~~~~~~~~divInatp 436 (518)
.++.|||+|.+|.+++..|.+.|.+|++++|+.++++.+.+.- +.. .....++.+ ....+|+||-++|
T Consensus 5 m~I~iIG~G~mG~~ia~~L~~~G~~V~~~~r~~~~~~~i~~~~~~~~~~~g~~~~~~~~~~~~~~e-~~~~aD~Vi~~v~ 83 (328)
T PRK14618 5 MRVAVLGAGAWGTALAVLAASKGVPVRLWARRPEFAAALAAERENREYLPGVALPAELYPTADPEE-ALAGADFAVVAVP 83 (328)
T ss_pred CeEEEECcCHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHhCcccccCCCCcCCCCeEEeCCHHH-HHcCCCEEEEECc
Confidence 4799999999999999999999999999999999988887542 100 111122322 3456899999887
Q ss_pred CCCCCCCCCCCCChhhhcCCCEEEEEeeC--CCc--hHHHH-HHHH---CCCeeeccHH
Q 010101 437 IGMEPNSDQSPVPKEALKAYELVFDAVYT--PRN--TRLLR-EAAE---VGATVVSGVE 487 (518)
Q Consensus 437 ~g~~~~~~~~~~~~~~l~~~~~v~Di~Y~--P~~--T~ll~-~A~~---~G~~~i~G~~ 487 (518)
.... .. + ...+++..+++++.-. |.. +..+. ...+ .|+.++.|-.
T Consensus 84 ~~~~---~~--v-~~~l~~~~~vi~~~~Gi~~~~~~~~~l~~~l~~~~~~~~~~~~gP~ 136 (328)
T PRK14618 84 SKAL---RE--T-LAGLPRALGYVSCAKGLAPDGGRLSELARVLEFLTQARVAVLSGPN 136 (328)
T ss_pred hHHH---HH--H-HHhcCcCCEEEEEeeccccCCCccchHHHHHHHhcCCCeEEEECcc
Confidence 5421 00 1 0224566788888662 332 22333 3334 5665555543
No 173
>PRK05600 thiamine biosynthesis protein ThiF; Validated
Probab=96.77 E-value=0.0021 Score=67.40 Aligned_cols=71 Identities=14% Similarity=0.259 Sum_probs=51.8
Q ss_pred cCCcEEEEEccchhHHHHHHHHHHCCC-eEEEEeCC-------------------HHHHHHHHHHhcC--cccccc----
Q 010101 365 IAGKIFVLVGAGGAGRALAFGAKSRGA-RVIIFNRN-------------------YERAKALADAVSG--EALHFE---- 418 (518)
Q Consensus 365 l~~k~vlvlGaGg~araia~~L~~~G~-~v~i~nRt-------------------~~ka~~la~~~~~--~~~~~~---- 418 (518)
+++++|+|+|+||.|..++..|+..|+ +|+|++++ ..|++.+++.+.. ..+.++
T Consensus 39 l~~~~VliiG~GglG~~v~~~La~~Gvg~i~ivD~D~ve~sNL~RQ~l~~~~diG~~Ka~~~~~~l~~~np~v~i~~~~~ 118 (370)
T PRK05600 39 LHNARVLVIGAGGLGCPAMQSLASAGVGTITLIDDDTVDVSNIHRQILFGASDVGRPKVEVAAERLKEIQPDIRVNALRE 118 (370)
T ss_pred hcCCcEEEECCCHHHHHHHHHHHHcCCCEEEEEeCCEEccccccccccCChhHCCCHHHHHHHHHHHHHCCCCeeEEeee
Confidence 567899999999999999999999999 99999976 3577777666532 111111
Q ss_pred -----cccccCCCCccEEEEcCC
Q 010101 419 -----YLHEFFPEKGMILANASA 436 (518)
Q Consensus 419 -----~l~~~~~~~~divInatp 436 (518)
...+ ...++|+||+|+-
T Consensus 119 ~i~~~~~~~-~~~~~DlVid~~D 140 (370)
T PRK05600 119 RLTAENAVE-LLNGVDLVLDGSD 140 (370)
T ss_pred ecCHHHHHH-HHhCCCEEEECCC
Confidence 1112 2467899999873
No 174
>PRK06200 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional
Probab=96.76 E-value=0.005 Score=60.89 Aligned_cols=73 Identities=22% Similarity=0.309 Sum_probs=54.0
Q ss_pred cCCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHhcCcc--c--cccc---cccc------CCCCccE
Q 010101 365 IAGKIFVLVGA-GGAGRALAFGAKSRGARVIIFNRNYERAKALADAVSGEA--L--HFEY---LHEF------FPEKGMI 430 (518)
Q Consensus 365 l~~k~vlvlGa-Gg~araia~~L~~~G~~v~i~nRt~~ka~~la~~~~~~~--~--~~~~---l~~~------~~~~~di 430 (518)
+++|+++|.|+ ||.|++++..|.+.|++|++++|+.++++++.+.++... + ++.+ +... .....|+
T Consensus 4 ~~~k~vlVtGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~ 83 (263)
T PRK06200 4 LHGQVALITGGGSGIGRALVERFLAEGARVAVLERSAEKLASLRQRFGDHVLVVEGDVTSYADNQRAVDQTVDAFGKLDC 83 (263)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCcceEEEccCCCHHHHHHHHHHHHHhcCCCCE
Confidence 46889999988 689999999999999999999999999998887765321 1 1111 1100 1235799
Q ss_pred EEEcCCC
Q 010101 431 LANASAI 437 (518)
Q Consensus 431 vInatp~ 437 (518)
+||+...
T Consensus 84 li~~ag~ 90 (263)
T PRK06200 84 FVGNAGI 90 (263)
T ss_pred EEECCCC
Confidence 9998764
No 175
>PRK15469 ghrA bifunctional glyoxylate/hydroxypyruvate reductase A; Provisional
Probab=96.76 E-value=0.0011 Score=67.85 Aligned_cols=68 Identities=18% Similarity=0.143 Sum_probs=47.8
Q ss_pred ccCCcEEEEEccchhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHhcCcccccccccccCCCCccEEEEcCCC
Q 010101 364 PIAGKIFVLVGAGGAGRALAFGAKSRGARVIIFNRNYERAKALADAVSGEALHFEYLHEFFPEKGMILANASAI 437 (518)
Q Consensus 364 ~l~~k~vlvlGaGg~araia~~L~~~G~~v~i~nRt~~ka~~la~~~~~~~~~~~~l~~~~~~~~divInatp~ 437 (518)
.+.++++.|+|.|.+|+.++..|...|++|+.++|+.++..... . .....++.+ .+.++|+|+.+.|.
T Consensus 133 ~l~g~tvgIvG~G~IG~~vA~~l~afG~~V~~~~~~~~~~~~~~-~----~~~~~~l~e-~l~~aDvvv~~lPl 200 (312)
T PRK15469 133 HREDFTIGILGAGVLGSKVAQSLQTWGFPLRCWSRSRKSWPGVQ-S----FAGREELSA-FLSQTRVLINLLPN 200 (312)
T ss_pred CcCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCCCCCCCce-e----ecccccHHH-HHhcCCEEEECCCC
Confidence 46789999999999999999999999999999999765421110 0 011223333 34567777777764
No 176
>COG0345 ProC Pyrroline-5-carboxylate reductase [Amino acid transport and metabolism]
Probab=96.75 E-value=0.0032 Score=62.70 Aligned_cols=67 Identities=25% Similarity=0.246 Sum_probs=53.2
Q ss_pred cEEEEEccchhHHHHHHHHHHCC----CeEEEEeCCHHHHHHHHHHhcCcccccccccccCCCCccEEEEcCCC
Q 010101 368 KIFVLVGAGGAGRALAFGAKSRG----ARVIIFNRNYERAKALADAVSGEALHFEYLHEFFPEKGMILANASAI 437 (518)
Q Consensus 368 k~vlvlGaGg~araia~~L~~~G----~~v~i~nRt~~ka~~la~~~~~~~~~~~~l~~~~~~~~divInatp~ 437 (518)
.++.+||+|-||+|++..|.+.| .+|++.||+.++.+.++++++... ..+... ...++|+|+-|..+
T Consensus 2 ~~IgfIG~G~Mg~Ai~~gl~~~g~~~~~~I~v~~~~~e~~~~l~~~~g~~~--~~~~~~-~~~~advv~LavKP 72 (266)
T COG0345 2 MKIGFIGAGNMGEAILSGLLKSGALPPEEIIVTNRSEEKRAALAAEYGVVT--TTDNQE-AVEEADVVFLAVKP 72 (266)
T ss_pred ceEEEEccCHHHHHHHHHHHhcCCCCcceEEEeCCCHHHHHHHHHHcCCcc--cCcHHH-HHhhCCEEEEEeCh
Confidence 47899999999999999999999 389999999999999999998662 112112 34567888887754
No 177
>PRK07060 short chain dehydrogenase; Provisional
Probab=96.75 E-value=0.0053 Score=59.70 Aligned_cols=76 Identities=30% Similarity=0.329 Sum_probs=56.0
Q ss_pred cccCCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHhcCccc--cccc---cccc--CCCCccEEEEc
Q 010101 363 SPIAGKIFVLVGA-GGAGRALAFGAKSRGARVIIFNRNYERAKALADAVSGEAL--HFEY---LHEF--FPEKGMILANA 434 (518)
Q Consensus 363 ~~l~~k~vlvlGa-Gg~araia~~L~~~G~~v~i~nRt~~ka~~la~~~~~~~~--~~~~---l~~~--~~~~~divIna 434 (518)
.++++++++|.|+ |+.|+.++..|.+.|++|.+++|+.++++++++..+...+ ++.+ +... .....|+||++
T Consensus 5 ~~~~~~~~lItGa~g~iG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~d~vi~~ 84 (245)
T PRK07060 5 FDFSGKSVLVTGASSGIGRACAVALAQRGARVVAAARNAAALDRLAGETGCEPLRLDVGDDAAIRAALAAAGAFDGLVNC 84 (245)
T ss_pred cccCCCEEEEeCCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCeEEEecCCCHHHHHHHHHHhCCCCEEEEC
Confidence 3467899999998 7899999999999999999999999999888877653321 2221 1110 12347999998
Q ss_pred CCCC
Q 010101 435 SAIG 438 (518)
Q Consensus 435 tp~g 438 (518)
....
T Consensus 85 ag~~ 88 (245)
T PRK07060 85 AGIA 88 (245)
T ss_pred CCCC
Confidence 8653
No 178
>PF10727 Rossmann-like: Rossmann-like domain; InterPro: IPR019665 This entry represents an NAD/NADP-binding domain with a core Rossmann-type fold, found in an uncharacterised protein family thought to be putative NADP oxidoreductase coenzyme F420-dependent proteins and/or NAD-dependent glycerol-3-phosphate dehydrogenase-like proteins. This Rossmann-fold domain consists of 3-layers alpha/beta/alpha, where the six beta strands are parallel in the order 321456.; PDB: 3DFU_A 3C24_A.
Probab=96.75 E-value=0.0012 Score=58.50 Aligned_cols=107 Identities=23% Similarity=0.239 Sum_probs=63.1
Q ss_pred CcEEEEEccchhHHHHHHHHHHCCCeE-EEEeCCHHHHHHHHHHhcCcc-cccccccccCCCCccEEEEcCCCCCCCCCC
Q 010101 367 GKIFVLVGAGGAGRALAFGAKSRGARV-IIFNRNYERAKALADAVSGEA-LHFEYLHEFFPEKGMILANASAIGMEPNSD 444 (518)
Q Consensus 367 ~k~vlvlGaGg~araia~~L~~~G~~v-~i~nRt~~ka~~la~~~~~~~-~~~~~l~~~~~~~~divInatp~g~~~~~~ 444 (518)
.-++-|||+|.+|.+++.+|.+.|++| -+++|+.+.++.+++.++... .++++ ....+|+++-|+|-..-.
T Consensus 10 ~l~I~iIGaGrVG~~La~aL~~ag~~v~~v~srs~~sa~~a~~~~~~~~~~~~~~----~~~~aDlv~iavpDdaI~--- 82 (127)
T PF10727_consen 10 RLKIGIIGAGRVGTALARALARAGHEVVGVYSRSPASAERAAAFIGAGAILDLEE----ILRDADLVFIAVPDDAIA--- 82 (127)
T ss_dssp --EEEEECTSCCCCHHHHHHHHTTSEEEEESSCHH-HHHHHHC--TT-----TTG----GGCC-SEEEE-S-CCHHH---
T ss_pred ccEEEEECCCHHHHHHHHHHHHCCCeEEEEEeCCccccccccccccccccccccc----ccccCCEEEEEechHHHH---
Confidence 458999999999999999999999954 577999999998888776432 23332 345689999999742110
Q ss_pred CCCCChh-----hhcCCCEEEEEeeCCCchHHHHHHHHCCCeee
Q 010101 445 QSPVPKE-----ALKAYELVFDAVYTPRNTRLLREAAEVGATVV 483 (518)
Q Consensus 445 ~~~~~~~-----~l~~~~~v~Di~Y~P~~T~ll~~A~~~G~~~i 483 (518)
++... .+.++.+|+-.+= -.....|+-++++|+.+.
T Consensus 83 --~va~~La~~~~~~~g~iVvHtSG-a~~~~vL~p~~~~Ga~~~ 123 (127)
T PF10727_consen 83 --EVAEQLAQYGAWRPGQIVVHTSG-ALGSDVLAPARERGAIVA 123 (127)
T ss_dssp --HHHHHHHCC--S-TT-EEEES-S-S--GGGGHHHHHTT-EEE
T ss_pred --HHHHHHHHhccCCCCcEEEECCC-CChHHhhhhHHHCCCeEE
Confidence 01111 1345667766543 335666788899998653
No 179
>PRK08507 prephenate dehydrogenase; Validated
Probab=96.74 E-value=0.0021 Score=64.49 Aligned_cols=111 Identities=14% Similarity=0.166 Sum_probs=71.6
Q ss_pred EEEEEccchhHHHHHHHHHHCCC--eEEEEeCCHHHHHHHHHHhcCcccccccccccCCCCccEEEEcCCCCCCCCCCCC
Q 010101 369 IFVLVGAGGAGRALAFGAKSRGA--RVIIFNRNYERAKALADAVSGEALHFEYLHEFFPEKGMILANASAIGMEPNSDQS 446 (518)
Q Consensus 369 ~vlvlGaGg~araia~~L~~~G~--~v~i~nRt~~ka~~la~~~~~~~~~~~~l~~~~~~~~divInatp~g~~~~~~~~ 446 (518)
++.|||.|.+|.+++..|.+.|. +|++++|++++++.+. ..+... ...+..+ ..++|+||-|+|.......-.
T Consensus 2 ~I~iIG~G~mG~sla~~l~~~g~~~~v~~~d~~~~~~~~~~-~~g~~~-~~~~~~~--~~~aD~Vilavp~~~~~~~~~- 76 (275)
T PRK08507 2 KIGIIGLGLMGGSLGLALKEKGLISKVYGYDHNELHLKKAL-ELGLVD-EIVSFEE--LKKCDVIFLAIPVDAIIEILP- 76 (275)
T ss_pred EEEEEccCHHHHHHHHHHHhcCCCCEEEEEcCCHHHHHHHH-HCCCCc-ccCCHHH--HhcCCEEEEeCcHHHHHHHHH-
Confidence 58999999999999999999886 7999999998877653 344211 1112222 234899999998753221000
Q ss_pred CCChhhhcCCCEEEEEeeCCCchHHHHHHHHC-CCeeeccHHH
Q 010101 447 PVPKEALKAYELVFDAVYTPRNTRLLREAAEV-GATVVSGVEM 488 (518)
Q Consensus 447 ~~~~~~l~~~~~v~Di~Y~P~~T~ll~~A~~~-G~~~i~G~~m 488 (518)
.+. . ++++.+|+|+... ...+.+.+.+. +..++.+-.|
T Consensus 77 ~l~-~-l~~~~iv~d~gs~--k~~i~~~~~~~~~~~~v~~hPm 115 (275)
T PRK08507 77 KLL-D-IKENTTIIDLGST--KAKIIESVPKHIRKNFIAAHPM 115 (275)
T ss_pred HHh-c-cCCCCEEEECccc--hHHHHHHHHHhcCCCEEecCCc
Confidence 011 1 4567899997553 45555655543 3456666566
No 180
>PRK07574 formate dehydrogenase; Provisional
Probab=96.72 E-value=0.0022 Score=67.41 Aligned_cols=71 Identities=13% Similarity=0.111 Sum_probs=50.6
Q ss_pred cccCCcEEEEEccchhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHhcCcccccccccccCCCCccEEEEcCCC
Q 010101 363 SPIAGKIFVLVGAGGAGRALAFGAKSRGARVIIFNRNYERAKALADAVSGEALHFEYLHEFFPEKGMILANASAI 437 (518)
Q Consensus 363 ~~l~~k~vlvlGaGg~araia~~L~~~G~~v~i~nRt~~ka~~la~~~~~~~~~~~~l~~~~~~~~divInatp~ 437 (518)
..+.|+++.|+|.|.+|++++..|...|++|..++|+... .+..+.++... ..++++ ...++|+|+.+.|.
T Consensus 188 ~~L~gktVGIvG~G~IG~~vA~~l~~fG~~V~~~dr~~~~-~~~~~~~g~~~--~~~l~e-ll~~aDvV~l~lPl 258 (385)
T PRK07574 188 YDLEGMTVGIVGAGRIGLAVLRRLKPFDVKLHYTDRHRLP-EEVEQELGLTY--HVSFDS-LVSVCDVVTIHCPL 258 (385)
T ss_pred eecCCCEEEEECCCHHHHHHHHHHHhCCCEEEEECCCCCc-hhhHhhcCcee--cCCHHH-HhhcCCEEEEcCCC
Confidence 3578999999999999999999999999999999998632 22223333221 122333 34567888888875
No 181
>COG0771 MurD UDP-N-acetylmuramoylalanine-D-glutamate ligase [Cell envelope biogenesis, outer membrane]
Probab=96.71 E-value=0.0061 Score=64.98 Aligned_cols=98 Identities=22% Similarity=0.292 Sum_probs=60.4
Q ss_pred cCCcEEEEEccchhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHH-hcCcccccccc--cccCCCCccEEEEcCCCCCCC
Q 010101 365 IAGKIFVLVGAGGAGRALAFGAKSRGARVIIFNRNYERAKALADA-VSGEALHFEYL--HEFFPEKGMILANASAIGMEP 441 (518)
Q Consensus 365 l~~k~vlvlGaGg~araia~~L~~~G~~v~i~nRt~~ka~~la~~-~~~~~~~~~~l--~~~~~~~~divInatp~g~~~ 441 (518)
+.+++|+|+|-|..|++++..|.++|++|++++.++.. +..... ...+.+.+... ......++|+|| .++|.
T Consensus 5 ~~~~kv~V~GLG~sG~a~a~~L~~~G~~v~v~D~~~~~-~~~~~~~~~~~~i~~~~g~~~~~~~~~~d~vV--~SPGi-- 79 (448)
T COG0771 5 FQGKKVLVLGLGKSGLAAARFLLKLGAEVTVSDDRPAP-EGLAAQPLLLEGIEVELGSHDDEDLAEFDLVV--KSPGI-- 79 (448)
T ss_pred ccCCEEEEEecccccHHHHHHHHHCCCeEEEEcCCCCc-cchhhhhhhccCceeecCccchhccccCCEEE--ECCCC--
Confidence 44899999999999999999999999999999955433 111111 00011111000 000123345554 22232
Q ss_pred CCCCCCCChhhhcCCCEEEEEeeCCCchHHHHHHHHCCCeeeccHHHHHH
Q 010101 442 NSDQSPVPKEALKAYELVFDAVYTPRNTRLLREAAEVGATVVSGVEMFIR 491 (518)
Q Consensus 442 ~~~~~~~~~~~l~~~~~v~Di~Y~P~~T~ll~~A~~~G~~~i~G~~ml~~ 491 (518)
|..+|++++|+++|.+++..++.+..
T Consensus 80 ------------------------~~~~p~v~~A~~~gi~i~~dieL~~r 105 (448)
T COG0771 80 ------------------------PPTHPLVEAAKAAGIEIIGDIELFYR 105 (448)
T ss_pred ------------------------CCCCHHHHHHHHcCCcEEeHHHHHHH
Confidence 33567888888999888888877654
No 182
>PRK08410 2-hydroxyacid dehydrogenase; Provisional
Probab=96.69 E-value=0.0044 Score=63.51 Aligned_cols=66 Identities=23% Similarity=0.311 Sum_probs=48.3
Q ss_pred ccCCcEEEEEccchhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHhcCcccccccccccCCCCccEEEEcCCCC
Q 010101 364 PIAGKIFVLVGAGGAGRALAFGAKSRGARVIIFNRNYERAKALADAVSGEALHFEYLHEFFPEKGMILANASAIG 438 (518)
Q Consensus 364 ~l~~k~vlvlGaGg~araia~~L~~~G~~v~i~nRt~~ka~~la~~~~~~~~~~~~l~~~~~~~~divInatp~g 438 (518)
.+.||++.|+|.|.+|++++..+...|.+|..++|+.... ..+.. ..++++ .+.++|+|+.+.|..
T Consensus 142 ~L~gktvGIiG~G~IG~~vA~~~~~fgm~V~~~d~~~~~~-----~~~~~---~~~l~e-ll~~sDvv~lh~Plt 207 (311)
T PRK08410 142 EIKGKKWGIIGLGTIGKRVAKIAQAFGAKVVYYSTSGKNK-----NEEYE---RVSLEE-LLKTSDIISIHAPLN 207 (311)
T ss_pred ccCCCEEEEECCCHHHHHHHHHHhhcCCEEEEECCCcccc-----ccCce---eecHHH-HhhcCCEEEEeCCCC
Confidence 5789999999999999999999999999999999974221 11111 223333 455688888888753
No 183
>PRK06139 short chain dehydrogenase; Provisional
Probab=96.68 E-value=0.0086 Score=61.85 Aligned_cols=47 Identities=36% Similarity=0.610 Sum_probs=42.3
Q ss_pred ccCCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHh
Q 010101 364 PIAGKIFVLVGA-GGAGRALAFGAKSRGARVIIFNRNYERAKALADAV 410 (518)
Q Consensus 364 ~l~~k~vlvlGa-Gg~araia~~L~~~G~~v~i~nRt~~ka~~la~~~ 410 (518)
.+++++++|.|+ ||+|++++..|++.|++|.+++|+.++.+++++++
T Consensus 4 ~l~~k~vlITGAs~GIG~aia~~la~~G~~Vvl~~R~~~~l~~~~~~~ 51 (330)
T PRK06139 4 PLHGAVVVITGASSGIGQATAEAFARRGARLVLAARDEEALQAVAEEC 51 (330)
T ss_pred CCCCCEEEEcCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHH
Confidence 356899999998 78999999999999999999999999998887765
No 184
>PRK06057 short chain dehydrogenase; Provisional
Probab=96.68 E-value=0.0054 Score=60.34 Aligned_cols=74 Identities=28% Similarity=0.324 Sum_probs=54.0
Q ss_pred ccCCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHhcCccc--cccc---cccc------CCCCccEE
Q 010101 364 PIAGKIFVLVGA-GGAGRALAFGAKSRGARVIIFNRNYERAKALADAVSGEAL--HFEY---LHEF------FPEKGMIL 431 (518)
Q Consensus 364 ~l~~k~vlvlGa-Gg~araia~~L~~~G~~v~i~nRt~~ka~~la~~~~~~~~--~~~~---l~~~------~~~~~div 431 (518)
.+++++++|+|+ ||.|++++..|.+.|++|.+++|+.++.+++.+.++...+ ++.+ +... .....|++
T Consensus 4 ~~~~~~vlItGasggIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~v 83 (255)
T PRK06057 4 RLAGRVAVITGGGSGIGLATARRLAAEGATVVVGDIDPEAGKAAADEVGGLFVPTDVTDEDAVNALFDTAAETYGSVDIA 83 (255)
T ss_pred cCCCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCcEEEeeCCCHHHHHHHHHHHHHHcCCCCEE
Confidence 367899999999 7899999999999999999999999888887776643221 1111 1100 12357999
Q ss_pred EEcCCC
Q 010101 432 ANASAI 437 (518)
Q Consensus 432 Inatp~ 437 (518)
|++...
T Consensus 84 i~~ag~ 89 (255)
T PRK06057 84 FNNAGI 89 (255)
T ss_pred EECCCc
Confidence 998753
No 185
>TIGR02355 moeB molybdopterin synthase sulfurylase MoeB. This model describes the molybdopterin biosynthesis protein MoeB in E. coli and related species. The enzyme covalently modifies the molybdopterin synthase MoaD by sulfurylation. This enzyme is closely related to ThiF, a thiamine biosynthesis enzyme that modifies ThiS by an analogous adenylation. Both MoeB and ThiF belong to the HesA/MoeB/ThiF family (pfam00899).
Probab=96.67 E-value=0.003 Score=62.20 Aligned_cols=35 Identities=20% Similarity=0.376 Sum_probs=32.0
Q ss_pred cCCcEEEEEccchhHHHHHHHHHHCCC-eEEEEeCC
Q 010101 365 IAGKIFVLVGAGGAGRALAFGAKSRGA-RVIIFNRN 399 (518)
Q Consensus 365 l~~k~vlvlGaGg~araia~~L~~~G~-~v~i~nRt 399 (518)
+++++|+|+|+||.|..++..|+..|+ ++++++++
T Consensus 22 L~~~~VlvvG~GglGs~va~~La~~Gvg~i~lvD~D 57 (240)
T TIGR02355 22 LKASRVLIVGLGGLGCAASQYLAAAGVGNLTLLDFD 57 (240)
T ss_pred HhCCcEEEECcCHHHHHHHHHHHHcCCCEEEEEeCC
Confidence 457899999999999999999999999 99998864
No 186
>PF00208 ELFV_dehydrog: Glutamate/Leucine/Phenylalanine/Valine dehydrogenase; InterPro: IPR006096 Glutamate, leucine, phenylalanine and valine dehydrogenases are structurally and functionally related. They contain a Gly-rich region containing a conserved Lys residue, which has been implicated in the catalytic activity, in each case a reversible oxidative deamination reaction. Glutamate dehydrogenases (1.4.1.2 from EC, 1.4.1.3 from EC, and 1.4.1.4 from EC) (GluDH) are enzymes that catalyse the NAD- and/or NADP-dependent reversible deamination of L-glutamate into alpha-ketoglutarate [, ]. GluDH isozymes are generally involved with either ammonia assimilation or glutamate catabolism. Two separate enzymes are present in yeasts: the NADP-dependent enzyme, which catalyses the amination of alpha-ketoglutarate to L-glutamate; and the NAD-dependent enzyme, which catalyses the reverse reaction [] - this form links the L-amino acids with the Krebs cycle, which provides a major pathway for metabolic interconversion of alpha-amino acids and alpha- keto acids []. Leucine dehydrogenase (1.4.1.9 from EC) (LeuDH) is a NAD-dependent enzyme that catalyses the reversible deamination of leucine and several other aliphatic amino acids to their keto analogues []. Each subunit of this octameric enzyme from Bacillus sphaericus contains 364 amino acids and folds into two domains, separated by a deep cleft. The nicotinamide ring of the NAD+ cofactor binds deep in this cleft, which is thought to close during the hydride transfer step of the catalytic cycle. Phenylalanine dehydrogenase (1.4.1.20 from EC) (PheDH) is na NAD-dependent enzyme that catalyses the reversible deamidation of L-phenylalanine into phenyl-pyruvate []. Valine dehydrogenase (1.4.1.8 from EC) (ValDH) is an NADP-dependent enzyme that catalyses the reversible deamidation of L-valine into 3-methyl-2-oxobutanoate []. This entry represents the C-terminal domain of these proteins.; GO: 0016491 oxidoreductase activity, 0006520 cellular amino acid metabolic process, 0055114 oxidation-reduction process; PDB: 1LEH_A 3AOG_D 3AOE_A 2YFQ_B 2YFH_B 1HRD_A 1K89_A 1AUP_A 1BGV_A 1B26_C ....
Probab=96.67 E-value=0.031 Score=55.22 Aligned_cols=139 Identities=19% Similarity=0.231 Sum_probs=84.6
Q ss_pred HHHHHHHHHHHHHhhccCCCCCCCCcccCCcEEEEEccchhHHHHHHHHHHCCCeEEEE--------eCC---HHHHHHH
Q 010101 338 CESAISAIEDALRERQGINGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGARVIIF--------NRN---YERAKAL 406 (518)
Q Consensus 338 ~~G~~~~l~~~l~~~~~~~~~~~~~~~l~~k~vlvlGaGg~araia~~L~~~G~~v~i~--------nRt---~~ka~~l 406 (518)
+.|...+++..+...++ .+++++++.|-|.|.+|+.++..|.+.|++|..+ |.+ .+...++
T Consensus 11 g~GV~~~~~~~~~~~~~--------~~l~g~~v~IqGfG~VG~~~a~~l~~~Ga~vv~vsD~~G~i~~~~Gld~~~l~~~ 82 (244)
T PF00208_consen 11 GYGVAYAIEAALEHLGG--------DSLEGKRVAIQGFGNVGSHAARFLAELGAKVVAVSDSSGAIYDPDGLDVEELLRI 82 (244)
T ss_dssp HHHHHHHHHHHHHHTTC--------HSSTTCEEEEEESSHHHHHHHHHHHHTTEEEEEEEESSEEEEETTEEHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCC--------CCcCCCEEEEECCCHHHHHHHHHHHHcCCEEEEEecCceEEEcCCCchHHHHHHH
Confidence 57788888776665332 4588999999999999999999999999865443 443 3344444
Q ss_pred HHHhcCcccccc--------ccc---ccCCCCccEEEEcCCCCCCCCCCCCCCChhhhc-CCCEEEEEeeCCCchHHHHH
Q 010101 407 ADAVSGEALHFE--------YLH---EFFPEKGMILANASAIGMEPNSDQSPVPKEALK-AYELVFDAVYTPRNTRLLRE 474 (518)
Q Consensus 407 a~~~~~~~~~~~--------~l~---~~~~~~~divInatp~g~~~~~~~~~~~~~~l~-~~~~v~Di~Y~P~~T~ll~~ 474 (518)
.++.+.....+. -++ +....++||+|-|.--+ .++...++. .++ +.++++.-..+|-..+=.+.
T Consensus 83 ~~~~~~~v~~~~~~~~~~~~~~~~~~~il~~~~DiliP~A~~~---~I~~~~~~~-~i~~~akiIvegAN~p~t~~a~~~ 158 (244)
T PF00208_consen 83 KEERGSRVDDYPLESPDGAEYIPNDDEILSVDCDILIPCALGN---VINEDNAPS-LIKSGAKIIVEGANGPLTPEADEI 158 (244)
T ss_dssp HHHHSSHSTTGTHTCSSTSEEECHHCHGGTSSSSEEEEESSST---SBSCHHHCH-CHHTT-SEEEESSSSSBSHHHHHH
T ss_pred HHHhCCcccccccccccceeEeccccccccccccEEEEcCCCC---eeCHHHHHH-HHhccCcEEEeCcchhccHHHHHH
Confidence 444443111111 011 11124789999774222 222211110 232 35899999999976655666
Q ss_pred HHHCCCeeeccHHH
Q 010101 475 AAEVGATVVSGVEM 488 (518)
Q Consensus 475 A~~~G~~~i~G~~m 488 (518)
-+++|+.+++..--
T Consensus 159 L~~rGI~viPD~~a 172 (244)
T PF00208_consen 159 LRERGILVIPDFLA 172 (244)
T ss_dssp HHHTT-EEE-HHHH
T ss_pred HHHCCCEEEcchhh
Confidence 78899998876553
No 187
>PRK08818 prephenate dehydrogenase; Provisional
Probab=96.66 E-value=0.00093 Score=69.79 Aligned_cols=105 Identities=18% Similarity=0.063 Sum_probs=74.1
Q ss_pred CcEEEEEcc-chhHHHHHHHHHHC-CCeEEEEeCCHHHHHHHHHHhcCcccccccccccCCCCccEEEEcCCCCCCCCCC
Q 010101 367 GKIFVLVGA-GGAGRALAFGAKSR-GARVIIFNRNYERAKALADAVSGEALHFEYLHEFFPEKGMILANASAIGMEPNSD 444 (518)
Q Consensus 367 ~k~vlvlGa-Gg~araia~~L~~~-G~~v~i~nRt~~ka~~la~~~~~~~~~~~~l~~~~~~~~divInatp~g~~~~~~ 444 (518)
..++.|||. |.+|++++.+|.+. |++|+.++|..+. +.+..+ ...++|+||-|+|+......-
T Consensus 4 ~~~I~IIGl~GliGgslA~alk~~~~~~V~g~D~~d~~--------------~~~~~~-~v~~aDlVilavPv~~~~~~l 68 (370)
T PRK08818 4 QPVVGIVGSAGAYGRWLARFLRTRMQLEVIGHDPADPG--------------SLDPAT-LLQRADVLIFSAPIRHTAALI 68 (370)
T ss_pred CCEEEEECCCCHHHHHHHHHHHhcCCCEEEEEcCCccc--------------cCCHHH-HhcCCCEEEEeCCHHHHHHHH
Confidence 468999999 99999999999975 6699999985221 111122 346789999999986432100
Q ss_pred CCCCChh--hhcCCCEEEEEeeCCCchHHHHHHHHCCCeeeccHHHH
Q 010101 445 QSPVPKE--ALKAYELVFDAVYTPRNTRLLREAAEVGATVVSGVEMF 489 (518)
Q Consensus 445 ~~~~~~~--~l~~~~~v~Di~Y~P~~T~ll~~A~~~G~~~i~G~~ml 489 (518)
.. +.+. .++++.+|.|+... .+..++.+.+.++.++.|-.|+
T Consensus 69 ~~-l~~~~~~l~~~~iVtDVgSv--K~~i~~~~~~~~~~fVG~HPMa 112 (370)
T PRK08818 69 EE-YVALAGGRAAGQLWLDVTSI--KQAPVAAMLASQAEVVGLHPMT 112 (370)
T ss_pred HH-HhhhhcCCCCCeEEEECCCC--cHHHHHHHHhcCCCEEeeCCCC
Confidence 00 1111 25788999999876 5667788888888889888887
No 188
>PRK06196 oxidoreductase; Provisional
Probab=96.66 E-value=0.0068 Score=61.90 Aligned_cols=75 Identities=25% Similarity=0.359 Sum_probs=54.6
Q ss_pred ccCCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHhcC-cc--ccccccc---cc------CCCCccE
Q 010101 364 PIAGKIFVLVGA-GGAGRALAFGAKSRGARVIIFNRNYERAKALADAVSG-EA--LHFEYLH---EF------FPEKGMI 430 (518)
Q Consensus 364 ~l~~k~vlvlGa-Gg~araia~~L~~~G~~v~i~nRt~~ka~~la~~~~~-~~--~~~~~l~---~~------~~~~~di 430 (518)
.+++|+++|.|+ ||.|++++..|.+.|++|++++|+.++++++++++.. .. .++.+.. .+ .....|+
T Consensus 23 ~l~~k~vlITGasggIG~~~a~~L~~~G~~Vv~~~R~~~~~~~~~~~l~~v~~~~~Dl~d~~~v~~~~~~~~~~~~~iD~ 102 (315)
T PRK06196 23 DLSGKTAIVTGGYSGLGLETTRALAQAGAHVIVPARRPDVAREALAGIDGVEVVMLDLADLESVRAFAERFLDSGRRIDI 102 (315)
T ss_pred CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhhhCeEEEccCCCHHHHHHHHHHHHhcCCCCCE
Confidence 467899999998 7899999999999999999999999998887766531 11 1222111 10 1245799
Q ss_pred EEEcCCCC
Q 010101 431 LANASAIG 438 (518)
Q Consensus 431 vInatp~g 438 (518)
|||+....
T Consensus 103 li~nAg~~ 110 (315)
T PRK06196 103 LINNAGVM 110 (315)
T ss_pred EEECCCCC
Confidence 99987643
No 189
>PRK07530 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=96.65 E-value=0.0041 Score=63.00 Aligned_cols=40 Identities=25% Similarity=0.305 Sum_probs=36.6
Q ss_pred cEEEEEccchhHHHHHHHHHHCCCeEEEEeCCHHHHHHHH
Q 010101 368 KIFVLVGAGGAGRALAFGAKSRGARVIIFNRNYERAKALA 407 (518)
Q Consensus 368 k~vlvlGaGg~araia~~L~~~G~~v~i~nRt~~ka~~la 407 (518)
+++.|||+|.+|.+++..|+..|.+|++++|++++.+...
T Consensus 5 ~kI~vIGaG~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~ 44 (292)
T PRK07530 5 KKVGVIGAGQMGNGIAHVCALAGYDVLLNDVSADRLEAGL 44 (292)
T ss_pred CEEEEECCcHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHH
Confidence 6799999999999999999999999999999998877644
No 190
>PRK08293 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=96.64 E-value=0.0051 Score=62.21 Aligned_cols=40 Identities=28% Similarity=0.365 Sum_probs=35.8
Q ss_pred cEEEEEccchhHHHHHHHHHHCCCeEEEEeCCHHHHHHHH
Q 010101 368 KIFVLVGAGGAGRALAFGAKSRGARVIIFNRNYERAKALA 407 (518)
Q Consensus 368 k~vlvlGaGg~araia~~L~~~G~~v~i~nRt~~ka~~la 407 (518)
++|.|||+|-+|.+++..|+..|.+|++++|+.++.++..
T Consensus 4 ~kIaViGaG~mG~~iA~~la~~G~~V~l~d~~~~~l~~~~ 43 (287)
T PRK08293 4 KNVTVAGAGVLGSQIAFQTAFHGFDVTIYDISDEALEKAK 43 (287)
T ss_pred cEEEEECCCHHHHHHHHHHHhcCCeEEEEeCCHHHHHHHH
Confidence 5799999999999999999999999999999988766553
No 191
>TIGR03325 BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase. Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase.
Probab=96.63 E-value=0.0056 Score=60.52 Aligned_cols=47 Identities=26% Similarity=0.478 Sum_probs=41.6
Q ss_pred cCCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHhc
Q 010101 365 IAGKIFVLVGA-GGAGRALAFGAKSRGARVIIFNRNYERAKALADAVS 411 (518)
Q Consensus 365 l~~k~vlvlGa-Gg~araia~~L~~~G~~v~i~nRt~~ka~~la~~~~ 411 (518)
+++|+++|.|+ ||.|++++..|.+.|++|.+++|+.++++++.+..+
T Consensus 3 ~~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~l~~~~~ 50 (262)
T TIGR03325 3 LKGEVVLVTGGASGLGRAIVDRFVAEGARVAVLDKSAAGLQELEAAHG 50 (262)
T ss_pred cCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhhcC
Confidence 46789999998 689999999999999999999999999888876544
No 192
>PLN03139 formate dehydrogenase; Provisional
Probab=96.63 E-value=0.0026 Score=66.87 Aligned_cols=71 Identities=21% Similarity=0.216 Sum_probs=50.8
Q ss_pred cccCCcEEEEEccchhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHhcCcccccccccccCCCCccEEEEcCCC
Q 010101 363 SPIAGKIFVLVGAGGAGRALAFGAKSRGARVIIFNRNYERAKALADAVSGEALHFEYLHEFFPEKGMILANASAI 437 (518)
Q Consensus 363 ~~l~~k~vlvlGaGg~araia~~L~~~G~~v~i~nRt~~ka~~la~~~~~~~~~~~~l~~~~~~~~divInatp~ 437 (518)
..+.|+++.|+|.|.+|++++..|...|++|..++|+....+ ..+..+... .+++.+ ...++|+|+.++|.
T Consensus 195 ~~L~gktVGIVG~G~IG~~vA~~L~afG~~V~~~d~~~~~~~-~~~~~g~~~--~~~l~e-ll~~sDvV~l~lPl 265 (386)
T PLN03139 195 YDLEGKTVGTVGAGRIGRLLLQRLKPFNCNLLYHDRLKMDPE-LEKETGAKF--EEDLDA-MLPKCDVVVINTPL 265 (386)
T ss_pred cCCCCCEEEEEeecHHHHHHHHHHHHCCCEEEEECCCCcchh-hHhhcCcee--cCCHHH-HHhhCCEEEEeCCC
Confidence 357899999999999999999999999999999999853322 223333222 123333 34567888888774
No 193
>PRK07825 short chain dehydrogenase; Provisional
Probab=96.62 E-value=0.0068 Score=60.27 Aligned_cols=73 Identities=25% Similarity=0.225 Sum_probs=53.9
Q ss_pred cCCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHhc-Ccc--ccccc----------ccccCCCCccE
Q 010101 365 IAGKIFVLVGA-GGAGRALAFGAKSRGARVIIFNRNYERAKALADAVS-GEA--LHFEY----------LHEFFPEKGMI 430 (518)
Q Consensus 365 l~~k~vlvlGa-Gg~araia~~L~~~G~~v~i~nRt~~ka~~la~~~~-~~~--~~~~~----------l~~~~~~~~di 430 (518)
+++++++|.|+ ||.|++++..|.+.|++|.++.|+.++++++++.++ ... .++.+ +.+ .....|+
T Consensus 3 ~~~~~ilVtGasggiG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~-~~~~id~ 81 (273)
T PRK07825 3 LRGKVVAITGGARGIGLATARALAALGARVAIGDLDEALAKETAAELGLVVGGPLDVTDPASFAAFLDAVEA-DLGPIDV 81 (273)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhccceEEEccCCCHHHHHHHHHHHHH-HcCCCCE
Confidence 45789999998 789999999999999999999999999988877665 211 12211 111 1245799
Q ss_pred EEEcCCCC
Q 010101 431 LANASAIG 438 (518)
Q Consensus 431 vInatp~g 438 (518)
+||+...+
T Consensus 82 li~~ag~~ 89 (273)
T PRK07825 82 LVNNAGVM 89 (273)
T ss_pred EEECCCcC
Confidence 99987654
No 194
>PF00056 Ldh_1_N: lactate/malate dehydrogenase, NAD binding domain Prosite entry for lactate dehydrogenase Prosite entry for malate dehydrogenase; InterPro: IPR001236 L-lactate dehydrogenases are metabolic enzymes which catalyse the conversion of L-lactate to pyruvate, the last step in anaerobic glycolysis []. L-lactate dehydrogenase is also found as a lens crystallin in bird and crocodile eyes. L-2-hydroxyisocaproate dehydrogenases are also members of the family. Malate dehydrogenases catalyse the interconversion of malate to oxaloacetate []. The enzyme participates in the citric acid cycle. This entry represents the N-terminal, and is thought to be a Rossmann NAD-binding fold.; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1IB6_B 3HHP_C 1IE3_A 2PWZ_A 1EMD_A 2CMD_A 1EZ4_D 9LDT_B 9LDB_B 2D4A_C ....
Probab=96.62 E-value=0.011 Score=53.39 Aligned_cols=72 Identities=19% Similarity=0.284 Sum_probs=53.4
Q ss_pred EEEEEcc-chhHHHHHHHHHHCCC--eEEEEeCCHHHHHHHHHHhcCc------cccc-ccccccCCCCccEEEEcCCCC
Q 010101 369 IFVLVGA-GGAGRALAFGAKSRGA--RVIIFNRNYERAKALADAVSGE------ALHF-EYLHEFFPEKGMILANASAIG 438 (518)
Q Consensus 369 ~vlvlGa-Gg~araia~~L~~~G~--~v~i~nRt~~ka~~la~~~~~~------~~~~-~~l~~~~~~~~divInatp~g 438 (518)
|+.|+|+ |..|.++++.|...+. +|.+++++.++++..+.++..- ...+ ....+ ...++|+||.+....
T Consensus 2 KV~IiGa~G~VG~~~a~~l~~~~l~~ei~L~D~~~~~~~g~a~Dl~~~~~~~~~~~~i~~~~~~-~~~~aDivvitag~~ 80 (141)
T PF00056_consen 2 KVAIIGAAGNVGSTLALLLAQQGLADEIVLIDINEDKAEGEALDLSHASAPLPSPVRITSGDYE-ALKDADIVVITAGVP 80 (141)
T ss_dssp EEEEESTTSHHHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHHHHHGSTEEEEEEESSGG-GGTTESEEEETTSTS
T ss_pred EEEEECCCChHHHHHHHHHHhCCCCCceEEeccCcccceeeehhhhhhhhhccccccccccccc-ccccccEEEEecccc
Confidence 6899999 9999999999998886 7999999999988888776421 0011 11122 356799999888654
Q ss_pred CCC
Q 010101 439 MEP 441 (518)
Q Consensus 439 ~~~ 441 (518)
..|
T Consensus 81 ~~~ 83 (141)
T PF00056_consen 81 RKP 83 (141)
T ss_dssp SST
T ss_pred ccc
Confidence 443
No 195
>TIGR00465 ilvC ketol-acid reductoisomerase. This is the second enzyme in the parallel isoleucine-valine biosynthetic pathway
Probab=96.62 E-value=0.0039 Score=63.85 Aligned_cols=69 Identities=20% Similarity=0.199 Sum_probs=48.7
Q ss_pred cCCcEEEEEccchhHHHHHHHHHHCCCeEEEEeCCH-HHHHHHHHHhcCcccccccccccCCCCccEEEEcCCCC
Q 010101 365 IAGKIFVLVGAGGAGRALAFGAKSRGARVIIFNRNY-ERAKALADAVSGEALHFEYLHEFFPEKGMILANASAIG 438 (518)
Q Consensus 365 l~~k~vlvlGaGg~araia~~L~~~G~~v~i~nRt~-~ka~~la~~~~~~~~~~~~l~~~~~~~~divInatp~g 438 (518)
++++++.|||+|-+|.+++..|...|.+|.+.+|.. ++.+++. +.+....+ ..+ ...++|+|+.++|..
T Consensus 1 l~~kkIgiIG~G~mG~AiA~~L~~sG~~Viv~~~~~~~~~~~a~-~~Gv~~~s---~~e-a~~~ADiVvLaVpp~ 70 (314)
T TIGR00465 1 LKGKTVAIIGYGSQGHAQALNLRDSGLNVIVGLRKGGASWKKAT-EDGFKVGT---VEE-AIPQADLIMNLLPDE 70 (314)
T ss_pred CCcCEEEEEeEcHHHHHHHHHHHHCCCeEEEEECcChhhHHHHH-HCCCEECC---HHH-HHhcCCEEEEeCCcH
Confidence 357899999999999999999999999887766654 3333333 44443222 222 345689999999864
No 196
>PRK05690 molybdopterin biosynthesis protein MoeB; Provisional
Probab=96.61 E-value=0.0034 Score=62.10 Aligned_cols=36 Identities=19% Similarity=0.324 Sum_probs=32.5
Q ss_pred ccCCcEEEEEccchhHHHHHHHHHHCCC-eEEEEeCC
Q 010101 364 PIAGKIFVLVGAGGAGRALAFGAKSRGA-RVIIFNRN 399 (518)
Q Consensus 364 ~l~~k~vlvlGaGg~araia~~L~~~G~-~v~i~nRt 399 (518)
.+++++|+|+|+||.|..++..|+..|+ +++|++.+
T Consensus 29 ~L~~~~VliiG~GglGs~va~~La~~Gvg~i~lvD~D 65 (245)
T PRK05690 29 KLKAARVLVVGLGGLGCAASQYLAAAGVGTLTLVDFD 65 (245)
T ss_pred HhcCCeEEEECCCHHHHHHHHHHHHcCCCEEEEEcCC
Confidence 3567899999999999999999999999 99999754
No 197
>TIGR01915 npdG NADPH-dependent F420 reductase. This model represents a subset of a parent family described by Pfam model pfam03807. Unlike the parent family, members of this family are found only in species with evidence of coenzyme F420. All members of this family are believed to act as NADPH-dependent F420 reductase.
Probab=96.61 E-value=0.0044 Score=60.08 Aligned_cols=70 Identities=20% Similarity=0.255 Sum_probs=51.7
Q ss_pred EEEEEc-cchhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHhc----Ccc----cccccccccCCCCccEEEEcCCCCC
Q 010101 369 IFVLVG-AGGAGRALAFGAKSRGARVIIFNRNYERAKALADAVS----GEA----LHFEYLHEFFPEKGMILANASAIGM 439 (518)
Q Consensus 369 ~vlvlG-aGg~araia~~L~~~G~~v~i~nRt~~ka~~la~~~~----~~~----~~~~~l~~~~~~~~divInatp~g~ 439 (518)
++.||| +|.+|.+++..|.+.|.+|++++|+.++++.+++... ... ....+..+ ...++|+||-|+|...
T Consensus 2 kI~IIGG~G~mG~ala~~L~~~G~~V~v~~r~~~~~~~l~~~~~~~~~~~g~~~~~~~~~~~e-a~~~aDvVilavp~~~ 80 (219)
T TIGR01915 2 KIAVLGGTGDQGKGLALRLAKAGNKIIIGSRDLEKAEEAAAKALEELGHGGSDIKVTGADNAE-AAKRADVVILAVPWDH 80 (219)
T ss_pred EEEEEcCCCHHHHHHHHHHHhCCCEEEEEEcCHHHHHHHHHHHHhhccccCCCceEEEeChHH-HHhcCCEEEEECCHHH
Confidence 589997 8999999999999999999999999999988876531 100 11111122 3456899999998653
No 198
>COG0686 Ald Alanine dehydrogenase [Amino acid transport and metabolism]
Probab=96.61 E-value=0.0048 Score=61.82 Aligned_cols=98 Identities=23% Similarity=0.263 Sum_probs=70.6
Q ss_pred cCCcEEEEEccchhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHhcCccc----ccccccccCCCCccEEEEcCCCCCC
Q 010101 365 IAGKIFVLVGAGGAGRALAFGAKSRGARVIIFNRNYERAKALADAVSGEAL----HFEYLHEFFPEKGMILANASAIGME 440 (518)
Q Consensus 365 l~~k~vlvlGaGg~araia~~L~~~G~~v~i~nRt~~ka~~la~~~~~~~~----~~~~l~~~~~~~~divInatp~g~~ 440 (518)
....++.|||.|-+|.-++.-...+|++|+|.+++.+|.++|-..|+.... +...+++ ...++|++|++.=++-.
T Consensus 166 V~~~kv~iiGGGvvgtnaAkiA~glgA~Vtild~n~~rl~~ldd~f~~rv~~~~st~~~iee-~v~~aDlvIgaVLIpga 244 (371)
T COG0686 166 VLPAKVVVLGGGVVGTNAAKIAIGLGADVTILDLNIDRLRQLDDLFGGRVHTLYSTPSNIEE-AVKKADLVIGAVLIPGA 244 (371)
T ss_pred CCCccEEEECCccccchHHHHHhccCCeeEEEecCHHHHhhhhHhhCceeEEEEcCHHHHHH-HhhhccEEEEEEEecCC
Confidence 345689999999999999999999999999999999999999888876521 2334444 56789999998743211
Q ss_pred CCCCCCCCChh---hhcCCCEEEEEeeC
Q 010101 441 PNSDQSPVPKE---ALKAYELVFDAVYT 465 (518)
Q Consensus 441 ~~~~~~~~~~~---~l~~~~~v~Di~Y~ 465 (518)
..+..+..+ .++++.+++|+.-.
T Consensus 245 --kaPkLvt~e~vk~MkpGsVivDVAiD 270 (371)
T COG0686 245 --KAPKLVTREMVKQMKPGSVIVDVAID 270 (371)
T ss_pred --CCceehhHHHHHhcCCCcEEEEEEEc
Confidence 112223333 35677888877643
No 199
>PLN03209 translocon at the inner envelope of chloroplast subunit 62; Provisional
Probab=96.59 E-value=0.0047 Score=67.71 Aligned_cols=45 Identities=27% Similarity=0.279 Sum_probs=40.2
Q ss_pred CCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHh
Q 010101 366 AGKIFVLVGA-GGAGRALAFGAKSRGARVIIFNRNYERAKALADAV 410 (518)
Q Consensus 366 ~~k~vlvlGa-Gg~araia~~L~~~G~~v~i~nRt~~ka~~la~~~ 410 (518)
+|+.++|+|+ |++|++++..|++.|++|+++.|+.++++.+++.+
T Consensus 79 ~gKvVLVTGATGgIG~aLAr~LLk~G~~Vval~Rn~ekl~~l~~~l 124 (576)
T PLN03209 79 DEDLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSAQRAESLVQSV 124 (576)
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHh
Confidence 5789999998 88999999999999999999999999988876543
No 200
>PRK00094 gpsA NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Validated
Probab=96.59 E-value=0.0045 Score=63.35 Aligned_cols=90 Identities=21% Similarity=0.188 Sum_probs=60.0
Q ss_pred EEEEEccchhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHhcC-c---------cc-ccccccccCCCCccEEEEcCCC
Q 010101 369 IFVLVGAGGAGRALAFGAKSRGARVIIFNRNYERAKALADAVSG-E---------AL-HFEYLHEFFPEKGMILANASAI 437 (518)
Q Consensus 369 ~vlvlGaGg~araia~~L~~~G~~v~i~nRt~~ka~~la~~~~~-~---------~~-~~~~l~~~~~~~~divInatp~ 437 (518)
++.|||+|.+|.+++..|++.|.+|++++|+.++++++.+.... . .. ...+..+ ...++|+||-|+|.
T Consensus 3 kI~iiG~G~mG~~~a~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~D~vi~~v~~ 81 (325)
T PRK00094 3 KIAVLGAGSWGTALAIVLARNGHDVTLWARDPEQAAEINADRENPRYLPGIKLPDNLRATTDLAE-ALADADLILVAVPS 81 (325)
T ss_pred EEEEECCCHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHcCcccccCCCCcCCCCeEEeCCHHH-HHhCCCEEEEeCCH
Confidence 68999999999999999999999999999999998888764210 0 01 1112222 23568999999885
Q ss_pred CCCCCCCCCCCC--hhhhcCCCEEEEEe
Q 010101 438 GMEPNSDQSPVP--KEALKAYELVFDAV 463 (518)
Q Consensus 438 g~~~~~~~~~~~--~~~l~~~~~v~Di~ 463 (518)
... ... +. ...+.++.+++++.
T Consensus 82 ~~~---~~v-~~~l~~~~~~~~~vi~~~ 105 (325)
T PRK00094 82 QAL---REV-LKQLKPLLPPDAPIVWAT 105 (325)
T ss_pred HHH---HHH-HHHHHhhcCCCCEEEEEe
Confidence 211 100 10 01235567888885
No 201
>cd00757 ThiF_MoeB_HesA_family ThiF_MoeB_HesA. Family of E1-like enzymes involved in molybdopterin and thiamine biosynthesis family. The common reaction mechanism catalyzed by MoeB and ThiF, like other E1 enzymes, begins with a nucleophilic attack of the C-terminal carboxylate of MoaD and ThiS, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS. MoeB, as the MPT synthase (MoaE/MoaD complex) sulfurase, is involved in the biosynthesis of the molybdenum cofactor, a derivative of the tricyclic pterin, molybdopterin (MPT). ThiF catalyzes the adenylation of ThiS, as part of the biosynthesis pathway of thiamin pyrophosphate (vitamin B1).
Probab=96.59 E-value=0.0032 Score=61.51 Aligned_cols=71 Identities=18% Similarity=0.266 Sum_probs=49.9
Q ss_pred cCCcEEEEEccchhHHHHHHHHHHCCC-eEEEEeCC-------------------HHHHHHHHHHhcCc--cccc-----
Q 010101 365 IAGKIFVLVGAGGAGRALAFGAKSRGA-RVIIFNRN-------------------YERAKALADAVSGE--ALHF----- 417 (518)
Q Consensus 365 l~~k~vlvlGaGg~araia~~L~~~G~-~v~i~nRt-------------------~~ka~~la~~~~~~--~~~~----- 417 (518)
+.+++|+|+|+||.|..++..|+..|+ +++|++.+ ..|++.+++.+... .+.+
T Consensus 19 L~~~~VlivG~GglGs~va~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~~~i~~~~~ 98 (228)
T cd00757 19 LKNARVLVVGAGGLGSPAAEYLAAAGVGKLGLVDDDVVELSNLQRQILHTEADVGQPKAEAAAERLRAINPDVEIEAYNE 98 (228)
T ss_pred HhCCcEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCEEcCcccccccccChhhCCChHHHHHHHHHHHhCCCCEEEEecc
Confidence 567899999999999999999999999 99998532 34666666665321 1111
Q ss_pred ----ccccccCCCCccEEEEcCC
Q 010101 418 ----EYLHEFFPEKGMILANASA 436 (518)
Q Consensus 418 ----~~l~~~~~~~~divInatp 436 (518)
+++.+ ...++|+||+|+.
T Consensus 99 ~i~~~~~~~-~~~~~DvVi~~~d 120 (228)
T cd00757 99 RLDAENAEE-LIAGYDLVLDCTD 120 (228)
T ss_pred eeCHHHHHH-HHhCCCEEEEcCC
Confidence 11122 2456899999874
No 202
>PRK15116 sulfur acceptor protein CsdL; Provisional
Probab=96.58 E-value=0.0057 Score=61.12 Aligned_cols=36 Identities=22% Similarity=0.341 Sum_probs=32.9
Q ss_pred ccCCcEEEEEccchhHHHHHHHHHHCCC-eEEEEeCC
Q 010101 364 PIAGKIFVLVGAGGAGRALAFGAKSRGA-RVIIFNRN 399 (518)
Q Consensus 364 ~l~~k~vlvlGaGg~araia~~L~~~G~-~v~i~nRt 399 (518)
.+++++|+|+|.||+|..++.+|+..|+ +|+|++.+
T Consensus 27 kL~~s~VlVvG~GGVGs~vae~Lar~GVg~itLiD~D 63 (268)
T PRK15116 27 LFADAHICVVGIGGVGSWAAEALARTGIGAITLIDMD 63 (268)
T ss_pred HhcCCCEEEECcCHHHHHHHHHHHHcCCCEEEEEeCC
Confidence 4678899999999999999999999998 99999865
No 203
>PRK04308 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=96.56 E-value=0.011 Score=63.46 Aligned_cols=37 Identities=22% Similarity=0.443 Sum_probs=33.1
Q ss_pred cCCcEEEEEccchhHHHHHHHHHHCCCeEEEEeCCHH
Q 010101 365 IAGKIFVLVGAGGAGRALAFGAKSRGARVIIFNRNYE 401 (518)
Q Consensus 365 l~~k~vlvlGaGg~araia~~L~~~G~~v~i~nRt~~ 401 (518)
+.+++++|+|.|++|++++..|.+.|++|++++++..
T Consensus 3 ~~~~~~~v~G~g~~G~~~a~~l~~~g~~v~~~d~~~~ 39 (445)
T PRK04308 3 FQNKKILVAGLGGTGISMIAYLRKNGAEVAAYDAELK 39 (445)
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCCC
Confidence 3578999999999999999999999999999987644
No 204
>PRK11880 pyrroline-5-carboxylate reductase; Reviewed
Probab=96.55 E-value=0.005 Score=61.40 Aligned_cols=68 Identities=21% Similarity=0.220 Sum_probs=51.5
Q ss_pred cEEEEEccchhHHHHHHHHHHCC---CeEEEEeCCHHHHHHHHHHhcCcccccccccccCCCCccEEEEcCCCC
Q 010101 368 KIFVLVGAGGAGRALAFGAKSRG---ARVIIFNRNYERAKALADAVSGEALHFEYLHEFFPEKGMILANASAIG 438 (518)
Q Consensus 368 k~vlvlGaGg~araia~~L~~~G---~~v~i~nRt~~ka~~la~~~~~~~~~~~~l~~~~~~~~divInatp~g 438 (518)
.++.|||+|.+|.+++..|.+.| .+|++++|+.++++++.+.++.... .+..+ ...++|+||-|++..
T Consensus 3 m~I~iIG~G~mG~~la~~l~~~g~~~~~v~v~~r~~~~~~~~~~~~g~~~~--~~~~~-~~~~advVil~v~~~ 73 (267)
T PRK11880 3 KKIGFIGGGNMASAIIGGLLASGVPAKDIIVSDPSPEKRAALAEEYGVRAA--TDNQE-AAQEADVVVLAVKPQ 73 (267)
T ss_pred CEEEEEechHHHHHHHHHHHhCCCCcceEEEEcCCHHHHHHHHHhcCCeec--CChHH-HHhcCCEEEEEcCHH
Confidence 46899999999999999999988 5899999999999888876653221 12112 234678888888653
No 205
>PRK01710 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=96.55 E-value=0.012 Score=63.55 Aligned_cols=36 Identities=28% Similarity=0.309 Sum_probs=33.1
Q ss_pred cCCcEEEEEccchhHHHHHHHHHHCCCeEEEEeCCH
Q 010101 365 IAGKIFVLVGAGGAGRALAFGAKSRGARVIIFNRNY 400 (518)
Q Consensus 365 l~~k~vlvlGaGg~araia~~L~~~G~~v~i~nRt~ 400 (518)
+.+++++|+|.|++|++++..|.+.|++|++++++.
T Consensus 12 ~~~~~i~v~G~G~sG~a~a~~L~~~G~~V~~~D~~~ 47 (458)
T PRK01710 12 IKNKKVAVVGIGVSNIPLIKFLVKLGAKVTAFDKKS 47 (458)
T ss_pred hcCCeEEEEcccHHHHHHHHHHHHCCCEEEEECCCC
Confidence 457899999999999999999999999999999864
No 206
>KOG0172 consensus Lysine-ketoglutarate reductase/saccharopine dehydrogenase [Amino acid transport and metabolism]
Probab=96.53 E-value=0.0016 Score=66.82 Aligned_cols=136 Identities=21% Similarity=0.279 Sum_probs=90.5
Q ss_pred CcEEEEEccchhHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHHhcCccccccc------ccccCCCCccEEEEcCCCCC
Q 010101 367 GKIFVLVGAGGAGRALAFGAKSRGA-RVIIFNRNYERAKALADAVSGEALHFEY------LHEFFPEKGMILANASAIGM 439 (518)
Q Consensus 367 ~k~vlvlGaGg~araia~~L~~~G~-~v~i~nRt~~ka~~la~~~~~~~~~~~~------l~~~~~~~~divInatp~g~ 439 (518)
+++||++|+|-+++.++..|++.+- +|+|..|+...++++++..+.+.+.++- |.. ....-|++|.-+|-..
T Consensus 2 ~~~vlllgsg~v~~p~~d~ls~~~dv~vtva~~~~~~~~~~~~~~~~~av~ldv~~~~~~L~~-~v~~~D~viSLlP~t~ 80 (445)
T KOG0172|consen 2 KKGVLLLGSGFVSRPVADFLSRKKDVNVTVASRTLKDAEALVKGINIKAVSLDVADEELALRK-EVKPLDLVISLLPYTF 80 (445)
T ss_pred CcceEEecCccccchHHHHHhhcCCceEEEehhhHHHHHHHhcCCCccceEEEccchHHHHHh-hhcccceeeeeccchh
Confidence 4789999999999999999998876 9999999999999999988766554431 222 3456799998888765
Q ss_pred CCCCCCCCCChhhhcCCCEEEEEeeC-CCchHHHHHHHHCCCe------eeccHHHH-----------HHHHHHHHHHhc
Q 010101 440 EPNSDQSPVPKEALKAYELVFDAVYT-PRNTRLLREAAEVGAT------VVSGVEMF-----------IRQALGQFRLFT 501 (518)
Q Consensus 440 ~~~~~~~~~~~~~l~~~~~v~Di~Y~-P~~T~ll~~A~~~G~~------~i~G~~ml-----------~~Qa~~qf~lw~ 501 (518)
+|. +...++....-+.--.|. |.-..|-+.|..+|.. ..+|++-+ ..|-+.+|.-++
T Consensus 81 h~l-----VaK~~i~~~~~~vtsSyv~pe~~~L~~~~v~AG~ti~~e~gldpGidhm~a~~ti~~vh~hgg~i~sf~syc 155 (445)
T KOG0172|consen 81 HPL-----VAKGCIITKEDSVTSSYVDPELEELEKAAVPAGSTIMNEIGLDPGIDHMPAMKTIDLVHEHGGKIKSFKSYC 155 (445)
T ss_pred hHH-----HHHHHHHhhcccccccccCHHHHhhhhhccCCCceEecccccCcchhhhhhhccchHHHhhcceeeehhhhc
Confidence 543 233333333334444554 3333333344556654 44676644 235577888888
Q ss_pred C-CCCCHH
Q 010101 502 G-GLAPED 508 (518)
Q Consensus 502 g-~~~p~~ 508 (518)
| .++|+.
T Consensus 156 Gglpape~ 163 (445)
T KOG0172|consen 156 GGLPAPER 163 (445)
T ss_pred CCccChhh
Confidence 5 466654
No 207
>PRK13581 D-3-phosphoglycerate dehydrogenase; Provisional
Probab=96.52 E-value=0.0061 Score=66.99 Aligned_cols=69 Identities=22% Similarity=0.327 Sum_probs=50.0
Q ss_pred ccCCcEEEEEccchhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHhcCcccccccccccCCCCccEEEEcCCCC
Q 010101 364 PIAGKIFVLVGAGGAGRALAFGAKSRGARVIIFNRNYERAKALADAVSGEALHFEYLHEFFPEKGMILANASAIG 438 (518)
Q Consensus 364 ~l~~k~vlvlGaGg~araia~~L~~~G~~v~i~nRt~~ka~~la~~~~~~~~~~~~l~~~~~~~~divInatp~g 438 (518)
.+.||++.|+|.|.+|+.++..|...|++|+.++|+.... .+...+....+ +.+ ...++|+|+.+.|..
T Consensus 137 ~l~gktvgIiG~G~IG~~vA~~l~~fG~~V~~~d~~~~~~--~~~~~g~~~~~---l~e-ll~~aDiV~l~lP~t 205 (526)
T PRK13581 137 ELYGKTLGIIGLGRIGSEVAKRAKAFGMKVIAYDPYISPE--RAAQLGVELVS---LDE-LLARADFITLHTPLT 205 (526)
T ss_pred ccCCCEEEEECCCHHHHHHHHHHHhCCCEEEEECCCCChh--HHHhcCCEEEc---HHH-HHhhCCEEEEccCCC
Confidence 4679999999999999999999999999999999964321 12233333223 333 345678888888763
No 208
>COG0569 TrkA K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism]
Probab=96.51 E-value=0.0067 Score=59.17 Aligned_cols=70 Identities=24% Similarity=0.379 Sum_probs=55.1
Q ss_pred cEEEEEccchhHHHHHHHHHHCCCeEEEEeCCHHHHHH-HHHHhcCccc-----ccccccccCCCCccEEEEcCCC
Q 010101 368 KIFVLVGAGGAGRALAFGAKSRGARVIIFNRNYERAKA-LADAVSGEAL-----HFEYLHEFFPEKGMILANASAI 437 (518)
Q Consensus 368 k~vlvlGaGg~araia~~L~~~G~~v~i~nRt~~ka~~-la~~~~~~~~-----~~~~l~~~~~~~~divInatp~ 437 (518)
++++|+|+|-.|+.+|..|.+.|.+|.++.++.+++++ ++.++....+ +.+.|.+..+.++|++|-+|.-
T Consensus 1 m~iiIiG~G~vG~~va~~L~~~g~~Vv~Id~d~~~~~~~~~~~~~~~~v~gd~t~~~~L~~agi~~aD~vva~t~~ 76 (225)
T COG0569 1 MKIIIIGAGRVGRSVARELSEEGHNVVLIDRDEERVEEFLADELDTHVVIGDATDEDVLEEAGIDDADAVVAATGN 76 (225)
T ss_pred CEEEEECCcHHHHHHHHHHHhCCCceEEEEcCHHHHHHHhhhhcceEEEEecCCCHHHHHhcCCCcCCEEEEeeCC
Confidence 46899999999999999999999999999999999888 4445553322 2233555457889999988864
No 209
>PRK06130 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=96.51 E-value=0.0064 Score=62.10 Aligned_cols=41 Identities=17% Similarity=0.282 Sum_probs=37.5
Q ss_pred cEEEEEccchhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHH
Q 010101 368 KIFVLVGAGGAGRALAFGAKSRGARVIIFNRNYERAKALAD 408 (518)
Q Consensus 368 k~vlvlGaGg~araia~~L~~~G~~v~i~nRt~~ka~~la~ 408 (518)
++|.|||+|-+|.+++..|++.|++|++++|+.++.+++.+
T Consensus 5 ~~I~vIGaG~mG~~iA~~l~~~g~~V~~~d~~~~~~~~~~~ 45 (311)
T PRK06130 5 QNLAIIGAGTMGSGIAALFARKGLQVVLIDVMEGALERARG 45 (311)
T ss_pred cEEEEECCCHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHH
Confidence 57999999999999999999999999999999988877655
No 210
>KOG1208 consensus Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport and catabolism]
Probab=96.50 E-value=0.0089 Score=61.20 Aligned_cols=79 Identities=27% Similarity=0.365 Sum_probs=58.9
Q ss_pred cccCCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHhcCc----c-----cccccccc-------c--
Q 010101 363 SPIAGKIFVLVGA-GGAGRALAFGAKSRGARVIIFNRNYERAKALADAVSGE----A-----LHFEYLHE-------F-- 423 (518)
Q Consensus 363 ~~l~~k~vlvlGa-Gg~araia~~L~~~G~~v~i~nRt~~ka~~la~~~~~~----~-----~~~~~l~~-------~-- 423 (518)
.++.++.++|.|+ .|.|++++..|+.+|++|++.+|+.+++++.++++... . .++.++.+ +
T Consensus 31 ~~~~~~~~vVTGansGIG~eta~~La~~Ga~Vv~~~R~~~~~~~~~~~i~~~~~~~~i~~~~lDLssl~SV~~fa~~~~~ 110 (314)
T KOG1208|consen 31 IDLSGKVALVTGATSGIGFETARELALRGAHVVLACRNEERGEEAKEQIQKGKANQKIRVIQLDLSSLKSVRKFAEEFKK 110 (314)
T ss_pred ccCCCcEEEEECCCCchHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCCCHHHHHHHHHHHHh
Confidence 4567899999988 79999999999999999999999999999999888631 1 12222211 0
Q ss_pred CCCCccEEEEcCCCCCCC
Q 010101 424 FPEKGMILANASAIGMEP 441 (518)
Q Consensus 424 ~~~~~divInatp~g~~~ 441 (518)
....-|++||...+...|
T Consensus 111 ~~~~ldvLInNAGV~~~~ 128 (314)
T KOG1208|consen 111 KEGPLDVLINNAGVMAPP 128 (314)
T ss_pred cCCCccEEEeCcccccCC
Confidence 134579999977664433
No 211
>cd00755 YgdL_like Family of activating enzymes (E1) of ubiquitin-like proteins related to the E.coli hypothetical protein ygdL. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown.
Probab=96.48 E-value=0.0048 Score=60.36 Aligned_cols=35 Identities=20% Similarity=0.366 Sum_probs=32.2
Q ss_pred cCCcEEEEEccchhHHHHHHHHHHCCC-eEEEEeCC
Q 010101 365 IAGKIFVLVGAGGAGRALAFGAKSRGA-RVIIFNRN 399 (518)
Q Consensus 365 l~~k~vlvlGaGg~araia~~L~~~G~-~v~i~nRt 399 (518)
+++++|+|+|.||.|..++.+|+..|+ ++++++.+
T Consensus 9 L~~~~VlVvG~GGvGs~va~~Lar~GVg~i~LvD~D 44 (231)
T cd00755 9 LRNAHVAVVGLGGVGSWAAEALARSGVGKLTLIDFD 44 (231)
T ss_pred HhCCCEEEECCCHHHHHHHHHHHHcCCCEEEEECCC
Confidence 567899999999999999999999999 99999864
No 212
>PRK08339 short chain dehydrogenase; Provisional
Probab=96.48 E-value=0.0068 Score=60.20 Aligned_cols=47 Identities=28% Similarity=0.388 Sum_probs=42.3
Q ss_pred ccCCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHh
Q 010101 364 PIAGKIFVLVGA-GGAGRALAFGAKSRGARVIIFNRNYERAKALADAV 410 (518)
Q Consensus 364 ~l~~k~vlvlGa-Gg~araia~~L~~~G~~v~i~nRt~~ka~~la~~~ 410 (518)
.+++|.++|.|+ ||.|++++..|++.|++|.+++|+.++++++++++
T Consensus 5 ~l~~k~~lItGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~ 52 (263)
T PRK08339 5 DLSGKLAFTTASSKGIGFGVARVLARAGADVILLSRNEENLKKAREKI 52 (263)
T ss_pred CCCCCEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHH
Confidence 467899999998 68999999999999999999999999988887665
No 213
>PRK04690 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=96.46 E-value=0.013 Score=63.41 Aligned_cols=36 Identities=19% Similarity=0.151 Sum_probs=32.5
Q ss_pred ccCCcEEEEEccchhHHHHHHHHHHCCCeEEEEeCC
Q 010101 364 PIAGKIFVLVGAGGAGRALAFGAKSRGARVIIFNRN 399 (518)
Q Consensus 364 ~l~~k~vlvlGaGg~araia~~L~~~G~~v~i~nRt 399 (518)
.+.+|+++|+|.|-.|++++..|.+.|++|++.+-+
T Consensus 5 ~~~~~~v~v~G~G~sG~~~~~~l~~~g~~v~~~d~~ 40 (468)
T PRK04690 5 QLEGRRVALWGWGREGRAAYRALRAHLPAQALTLFC 40 (468)
T ss_pred hcCCCEEEEEccchhhHHHHHHHHHcCCEEEEEcCC
Confidence 356899999999999999999999999999999843
No 214
>PRK15409 bifunctional glyoxylate/hydroxypyruvate reductase B; Provisional
Probab=96.43 E-value=0.0077 Score=62.01 Aligned_cols=136 Identities=15% Similarity=0.148 Sum_probs=78.2
Q ss_pred ccCCcEEEEEccchhHHHHHHHHH-HCCCeEEEEeCCHHHHHHHHHHhcCcccccccccccCCCCccEEEEcCCCCCCCC
Q 010101 364 PIAGKIFVLVGAGGAGRALAFGAK-SRGARVIIFNRNYERAKALADAVSGEALHFEYLHEFFPEKGMILANASAIGMEPN 442 (518)
Q Consensus 364 ~l~~k~vlvlGaGg~araia~~L~-~~G~~v~i~nRt~~ka~~la~~~~~~~~~~~~l~~~~~~~~divInatp~g~~~~ 442 (518)
.+.||++.|+|.|.+|++++..|. ..|++|..++|..... ....++....++++ .+.++|+|+.+.|..-...
T Consensus 142 ~L~gktvGIiG~G~IG~~va~~l~~~fgm~V~~~~~~~~~~--~~~~~~~~~~~l~e----ll~~sDvv~lh~plt~~T~ 215 (323)
T PRK15409 142 DVHHKTLGIVGMGRIGMALAQRAHFGFNMPILYNARRHHKE--AEERFNARYCDLDT----LLQESDFVCIILPLTDETH 215 (323)
T ss_pred CCCCCEEEEEcccHHHHHHHHHHHhcCCCEEEEECCCCchh--hHHhcCcEecCHHH----HHHhCCEEEEeCCCChHHh
Confidence 578999999999999999999997 7899999999874321 11233333223333 3456788877777531100
Q ss_pred --CC------------------CCCCChh----hhcCC---CEEEEEeeC-C--CchHHHHHHH-----HCCCeeeccHH
Q 010101 443 --SD------------------QSPVPKE----ALKAY---ELVFDAVYT-P--RNTRLLREAA-----EVGATVVSGVE 487 (518)
Q Consensus 443 --~~------------------~~~~~~~----~l~~~---~~v~Di~Y~-P--~~T~ll~~A~-----~~G~~~i~G~~ 487 (518)
.+ ...++++ .|..+ ...+|+-+. | ...||++.-. -.|..+.+...
T Consensus 216 ~li~~~~l~~mk~ga~lIN~aRG~vVde~AL~~AL~~g~i~gAaLDVf~~EP~~~~~pL~~~~nvilTPHia~~t~e~~~ 295 (323)
T PRK15409 216 HLFGAEQFAKMKSSAIFINAGRGPVVDENALIAALQKGEIHAAGLDVFEQEPLSVDSPLLSLPNVVAVPHIGSATHETRY 295 (323)
T ss_pred hccCHHHHhcCCCCeEEEECCCccccCHHHHHHHHHcCCeeEEEeecCCCCCCCCCchhhcCCCEEEcCcCCCCcHHHHH
Confidence 00 0012221 23333 235787664 3 2455643211 01444455556
Q ss_pred HHHHHHHHHHHHhc-CCCC
Q 010101 488 MFIRQALGQFRLFT-GGLA 505 (518)
Q Consensus 488 ml~~Qa~~qf~lw~-g~~~ 505 (518)
-+..+++.++.-|+ |+++
T Consensus 296 ~~~~~~~~ni~~~~~g~~~ 314 (323)
T PRK15409 296 NMAACAVDNLIDALQGKVE 314 (323)
T ss_pred HHHHHHHHHHHHHHcCCCC
Confidence 66777888888776 5443
No 215
>PRK11199 tyrA bifunctional chorismate mutase/prephenate dehydrogenase; Provisional
Probab=96.43 E-value=0.002 Score=67.74 Aligned_cols=101 Identities=18% Similarity=0.180 Sum_probs=64.9
Q ss_pred CcEEEEEc-cchhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHhcCcccccccccccCCCCccEEEEcCCCCCCCCCCC
Q 010101 367 GKIFVLVG-AGGAGRALAFGAKSRGARVIIFNRNYERAKALADAVSGEALHFEYLHEFFPEKGMILANASAIGMEPNSDQ 445 (518)
Q Consensus 367 ~k~vlvlG-aGg~araia~~L~~~G~~v~i~nRt~~ka~~la~~~~~~~~~~~~l~~~~~~~~divInatp~g~~~~~~~ 445 (518)
.+++.|+| .|.+|++++.+|.+.|..|++++|+... +..+ ...++|+||-|+|.......-.
T Consensus 98 ~~~I~IiGG~GlmG~slA~~l~~~G~~V~~~d~~~~~----------------~~~~-~~~~aDlVilavP~~~~~~~~~ 160 (374)
T PRK11199 98 LRPVVIVGGKGQLGRLFAKMLTLSGYQVRILEQDDWD----------------RAED-ILADAGMVIVSVPIHLTEEVIA 160 (374)
T ss_pred cceEEEEcCCChhhHHHHHHHHHCCCeEEEeCCCcch----------------hHHH-HHhcCCEEEEeCcHHHHHHHHH
Confidence 47899998 8999999999999999999999996320 1111 2346899999999764221000
Q ss_pred CCCChhhhcCCCEEEEEeeCCCchHHHHHHHHC-CCeeeccHHHH
Q 010101 446 SPVPKEALKAYELVFDAVYTPRNTRLLREAAEV-GATVVSGVEMF 489 (518)
Q Consensus 446 ~~~~~~~l~~~~~v~Di~Y~P~~T~ll~~A~~~-G~~~i~G~~ml 489 (518)
.+.. ++++.+|.|+... .+..++++.+. ...++.+-.|+
T Consensus 161 -~l~~--l~~~~iv~Dv~Sv--K~~~~~~~~~~~~~~fvg~HPm~ 200 (374)
T PRK11199 161 -RLPP--LPEDCILVDLTSV--KNAPLQAMLAAHSGPVLGLHPMF 200 (374)
T ss_pred -HHhC--CCCCcEEEECCCc--cHHHHHHHHHhCCCCEEeeCCCC
Confidence 0111 5678899999654 34444444432 22455444443
No 216
>PRK05854 short chain dehydrogenase; Provisional
Probab=96.42 E-value=0.0081 Score=61.41 Aligned_cols=48 Identities=35% Similarity=0.457 Sum_probs=42.7
Q ss_pred cccCCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHh
Q 010101 363 SPIAGKIFVLVGA-GGAGRALAFGAKSRGARVIIFNRNYERAKALADAV 410 (518)
Q Consensus 363 ~~l~~k~vlvlGa-Gg~araia~~L~~~G~~v~i~nRt~~ka~~la~~~ 410 (518)
.++++|+++|.|+ ||.|++++..|++.|++|++++|+.++++++.+++
T Consensus 10 ~~l~gk~~lITGas~GIG~~~a~~La~~G~~Vil~~R~~~~~~~~~~~l 58 (313)
T PRK05854 10 PDLSGKRAVVTGASDGLGLGLARRLAAAGAEVILPVRNRAKGEAAVAAI 58 (313)
T ss_pred cccCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHH
Confidence 4578999999987 68999999999999999999999999888876655
No 217
>PRK08223 hypothetical protein; Validated
Probab=96.42 E-value=0.0053 Score=61.73 Aligned_cols=36 Identities=17% Similarity=0.286 Sum_probs=32.6
Q ss_pred ccCCcEEEEEccchhHHHHHHHHHHCCC-eEEEEeCC
Q 010101 364 PIAGKIFVLVGAGGAGRALAFGAKSRGA-RVIIFNRN 399 (518)
Q Consensus 364 ~l~~k~vlvlGaGg~araia~~L~~~G~-~v~i~nRt 399 (518)
.+++++|+|+|+||.|..++..|+..|+ +++|++.+
T Consensus 24 kL~~s~VlIvG~GGLGs~va~~LA~aGVG~i~lvD~D 60 (287)
T PRK08223 24 RLRNSRVAIAGLGGVGGIHLLTLARLGIGKFTIADFD 60 (287)
T ss_pred HHhcCCEEEECCCHHHHHHHHHHHHhCCCeEEEEeCC
Confidence 3567899999999999999999999999 99998864
No 218
>KOG1200 consensus Mitochondrial/plastidial beta-ketoacyl-ACP reductase [Lipid transport and metabolism]
Probab=96.41 E-value=0.0086 Score=56.21 Aligned_cols=72 Identities=28% Similarity=0.404 Sum_probs=56.3
Q ss_pred cCCcEEEEEccc-hhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHhcC--ccccc--------------ccccccCCCC
Q 010101 365 IAGKIFVLVGAG-GAGRALAFGAKSRGARVIIFNRNYERAKALADAVSG--EALHF--------------EYLHEFFPEK 427 (518)
Q Consensus 365 l~~k~vlvlGaG-g~araia~~L~~~G~~v~i~nRt~~ka~~la~~~~~--~~~~~--------------~~l~~~~~~~ 427 (518)
+..|.++|.|+| |.|||++..|++.|++|.+.+++.+.|++.|..++. .+..| ++... .+..
T Consensus 12 ~~sk~~~vtGg~sGIGrAia~~la~~Garv~v~dl~~~~A~ata~~L~g~~~h~aF~~DVS~a~~v~~~l~e~~k-~~g~ 90 (256)
T KOG1200|consen 12 LMSKVAAVTGGSSGIGRAIAQLLAKKGARVAVADLDSAAAEATAGDLGGYGDHSAFSCDVSKAHDVQNTLEEMEK-SLGT 90 (256)
T ss_pred HhcceeEEecCCchHHHHHHHHHHhcCcEEEEeecchhhHHHHHhhcCCCCccceeeeccCcHHHHHHHHHHHHH-hcCC
Confidence 446788899887 899999999999999999999999999999999875 33222 11122 3456
Q ss_pred ccEEEEcCCC
Q 010101 428 GMILANASAI 437 (518)
Q Consensus 428 ~divInatp~ 437 (518)
.+++|||...
T Consensus 91 psvlVncAGI 100 (256)
T KOG1200|consen 91 PSVLVNCAGI 100 (256)
T ss_pred CcEEEEcCcc
Confidence 7999999865
No 219
>COG1052 LdhA Lactate dehydrogenase and related dehydrogenases [Energy production and conversion / Coenzyme metabolism / General function prediction only]
Probab=96.41 E-value=0.0082 Score=61.71 Aligned_cols=138 Identities=20% Similarity=0.308 Sum_probs=83.9
Q ss_pred cccCCcEEEEEccchhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHhcCcccccccccccCCCCccEEEEcCCCCCCCC
Q 010101 363 SPIAGKIFVLVGAGGAGRALAFGAKSRGARVIIFNRNYERAKALADAVSGEALHFEYLHEFFPEKGMILANASAIGMEPN 442 (518)
Q Consensus 363 ~~l~~k~vlvlGaGg~araia~~L~~~G~~v~i~nRt~~ka~~la~~~~~~~~~~~~l~~~~~~~~divInatp~g~~~~ 442 (518)
..++||++.|+|.|..|++++..++..|++|..++|+.. .+..+.++..+.++++ .+.++|+|+...|..-...
T Consensus 142 ~~l~gktvGIiG~GrIG~avA~r~~~Fgm~v~y~~~~~~--~~~~~~~~~~y~~l~e----ll~~sDii~l~~Plt~~T~ 215 (324)
T COG1052 142 FDLRGKTLGIIGLGRIGQAVARRLKGFGMKVLYYDRSPN--PEAEKELGARYVDLDE----LLAESDIISLHCPLTPETR 215 (324)
T ss_pred cCCCCCEEEEECCCHHHHHHHHHHhcCCCEEEEECCCCC--hHHHhhcCceeccHHH----HHHhCCEEEEeCCCChHHh
Confidence 467899999999999999999999988889999999864 2222333333333333 2345677766666531110
Q ss_pred --CC------------------CCCCChh----hhcCC---CEEEEEeeC-CC--chHHHHHHHH--------CCCeeec
Q 010101 443 --SD------------------QSPVPKE----ALKAY---ELVFDAVYT-PR--NTRLLREAAE--------VGATVVS 484 (518)
Q Consensus 443 --~~------------------~~~~~~~----~l~~~---~~v~Di~Y~-P~--~T~ll~~A~~--------~G~~~i~ 484 (518)
++ ...++++ .|+.+ ...+|+-.. |. ..+|++.... .++-+..
T Consensus 216 hLin~~~l~~mk~ga~lVNtaRG~~VDe~ALi~AL~~g~i~gaglDV~e~Ep~~~d~~l~~l~~~~~vvltPHia~at~e 295 (324)
T COG1052 216 HLINAEELAKMKPGAILVNTARGGLVDEQALIDALKSGKIAGAGLDVFENEPALFDHPLLRLDNFPNVVLTPHIASATEE 295 (324)
T ss_pred hhcCHHHHHhCCCCeEEEECCCccccCHHHHHHHHHhCCcceEEeeecCCCCCCCChhHhhccCCCCEEEccccccccHH
Confidence 00 0012221 12222 346677665 44 4677655542 2455566
Q ss_pred cHHHHHHHHHHHHHHhc-CCCCC
Q 010101 485 GVEMFIRQALGQFRLFT-GGLAP 506 (518)
Q Consensus 485 G~~ml~~Qa~~qf~lw~-g~~~p 506 (518)
...-+..+++...+-|. |..++
T Consensus 296 a~~~m~~~~~~nl~~~~~g~~~~ 318 (324)
T COG1052 296 ARKAMAELALENLEAFFDGGVPP 318 (324)
T ss_pred HHHHHHHHHHHHHHHHHcCCCCC
Confidence 67778888888888777 44443
No 220
>PRK07819 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=96.40 E-value=0.0083 Score=60.71 Aligned_cols=38 Identities=32% Similarity=0.407 Sum_probs=35.6
Q ss_pred cEEEEEccchhHHHHHHHHHHCCCeEEEEeCCHHHHHH
Q 010101 368 KIFVLVGAGGAGRALAFGAKSRGARVIIFNRNYERAKA 405 (518)
Q Consensus 368 k~vlvlGaGg~araia~~L~~~G~~v~i~nRt~~ka~~ 405 (518)
++|.|||+|-||+.+|..++..|++|++++++++..+.
T Consensus 6 ~~V~ViGaG~mG~~iA~~~a~~G~~V~l~d~~~~~~~~ 43 (286)
T PRK07819 6 QRVGVVGAGQMGAGIAEVCARAGVDVLVFETTEELATA 43 (286)
T ss_pred cEEEEEcccHHHHHHHHHHHhCCCEEEEEECCHHHHHH
Confidence 47999999999999999999999999999999998776
No 221
>TIGR01327 PGDH D-3-phosphoglycerate dehydrogenase. This model represents a long form of D-3-phosphoglycerate dehydrogenase, the serA gene of one pathway of serine biosynthesis. Shorter forms, scoring between trusted and noise cutoff, include SerA from E. coli.
Probab=96.38 E-value=0.0093 Score=65.52 Aligned_cols=71 Identities=20% Similarity=0.329 Sum_probs=50.5
Q ss_pred cccCCcEEEEEccchhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHhcCcccccccccccCCCCccEEEEcCCCC
Q 010101 363 SPIAGKIFVLVGAGGAGRALAFGAKSRGARVIIFNRNYERAKALADAVSGEALHFEYLHEFFPEKGMILANASAIG 438 (518)
Q Consensus 363 ~~l~~k~vlvlGaGg~araia~~L~~~G~~v~i~nRt~~ka~~la~~~~~~~~~~~~l~~~~~~~~divInatp~g 438 (518)
..+.||++.|+|.|.+|++++..|...|++|+.++|+.... .+..++.... +++.+ ...++|+|+.+.|..
T Consensus 134 ~~l~gktvgIiG~G~IG~~vA~~l~~fG~~V~~~d~~~~~~--~~~~~g~~~~--~~l~e-ll~~aDvV~l~lPlt 204 (525)
T TIGR01327 134 TELYGKTLGVIGLGRIGSIVAKRAKAFGMKVLAYDPYISPE--RAEQLGVELV--DDLDE-LLARADFITVHTPLT 204 (525)
T ss_pred cccCCCEEEEECCCHHHHHHHHHHHhCCCEEEEECCCCChh--HHHhcCCEEc--CCHHH-HHhhCCEEEEccCCC
Confidence 35789999999999999999999999999999999853221 1233343221 22333 345688888888753
No 222
>PRK01390 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=96.37 E-value=0.023 Score=61.35 Aligned_cols=99 Identities=26% Similarity=0.310 Sum_probs=61.2
Q ss_pred cCCcEEEEEccchhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHhcCcccccccccccCCCCccEEEEcCCCCCCCCCC
Q 010101 365 IAGKIFVLVGAGGAGRALAFGAKSRGARVIIFNRNYERAKALADAVSGEALHFEYLHEFFPEKGMILANASAIGMEPNSD 444 (518)
Q Consensus 365 l~~k~vlvlGaGg~araia~~L~~~G~~v~i~nRt~~ka~~la~~~~~~~~~~~~l~~~~~~~~divInatp~g~~~~~~ 444 (518)
+++++++|+|.||+|++++..|.++|++|+++++.......|. ..+... .........++|+||-+. |..|.
T Consensus 7 ~~~~~i~viG~G~~G~~~a~~l~~~G~~v~~~D~~~~~~~~l~-~~g~~~---~~~~~~~~~~~d~vv~sp--~i~~~-- 78 (460)
T PRK01390 7 FAGKTVAVFGLGGSGLATARALVAGGAEVIAWDDNPASRAKAA-AAGITT---ADLRTADWSGFAALVLSP--GVPLT-- 78 (460)
T ss_pred cCCCEEEEEeecHhHHHHHHHHHHCCCEEEEECCChhhHHHHH-hcCccc---cCCChhHHcCCCEEEECC--CCCcc--
Confidence 5688999999999999999999999999999998755433332 223221 111110123467766422 22111
Q ss_pred CCCCChhhhcCCCEEEEEeeCCCchHHHHHHHHCCCeeeccHHHHHH
Q 010101 445 QSPVPKEALKAYELVFDAVYTPRNTRLLREAAEVGATVVSGVEMFIR 491 (518)
Q Consensus 445 ~~~~~~~~l~~~~~v~Di~Y~P~~T~ll~~A~~~G~~~i~G~~ml~~ 491 (518)
+|..-+.+..|+++|++++..++.+..
T Consensus 79 --------------------~~~~~~~v~~a~~~gi~i~~~~~~~~~ 105 (460)
T PRK01390 79 --------------------HPKPHWVVDLARAAGVEVIGDIELFCR 105 (460)
T ss_pred --------------------CCcccHHHHHHHHcCCcEEeHHHHHHH
Confidence 011114667778888888877776543
No 223
>PRK06129 3-hydroxyacyl-CoA dehydrogenase; Validated
Probab=96.36 E-value=0.011 Score=60.54 Aligned_cols=39 Identities=28% Similarity=0.344 Sum_probs=35.3
Q ss_pred cEEEEEccchhHHHHHHHHHHCCCeEEEEeCCHHHHHHH
Q 010101 368 KIFVLVGAGGAGRALAFGAKSRGARVIIFNRNYERAKAL 406 (518)
Q Consensus 368 k~vlvlGaGg~araia~~L~~~G~~v~i~nRt~~ka~~l 406 (518)
++|.|||+|-+|.+++..|++.|++|++++|++++.+..
T Consensus 3 ~~V~VIG~G~mG~~iA~~la~~G~~V~v~d~~~~~~~~~ 41 (308)
T PRK06129 3 GSVAIIGAGLIGRAWAIVFARAGHEVRLWDADPAAAAAA 41 (308)
T ss_pred cEEEEECccHHHHHHHHHHHHCCCeeEEEeCCHHHHHHH
Confidence 479999999999999999999999999999998876653
No 224
>KOG3007 consensus Mu-crystallin [Amino acid transport and metabolism]
Probab=96.35 E-value=0.019 Score=56.24 Aligned_cols=113 Identities=21% Similarity=0.159 Sum_probs=81.0
Q ss_pred cEEEEEccchhHHHHHHHHHHC-C-C-eEEEEeCCHHHHHHHHHHhcCcc-------cccccccccCCCCccEEEEcCCC
Q 010101 368 KIFVLVGAGGAGRALAFGAKSR-G-A-RVIIFNRNYERAKALADAVSGEA-------LHFEYLHEFFPEKGMILANASAI 437 (518)
Q Consensus 368 k~vlvlGaGg~araia~~L~~~-G-~-~v~i~nRt~~ka~~la~~~~~~~-------~~~~~l~~~~~~~~divInatp~ 437 (518)
....++|+|--|-.-++...+. - . +|.|+||+.+.|+++|+.+.... ...+.++. +...+|||+.||+.
T Consensus 139 ~vL~i~GsG~qA~~hi~ih~~~~pslreVrIwnht~e~A~~la~~lsk~~~~iqie~~~~qsl~~-aV~~sDIIs~atls 217 (333)
T KOG3007|consen 139 CVLTIFGSGLQAFWHIYIHIKLIPSLREVRIWNHTNEMALDLAKSLSKLFSNIQIELNQYQSLNG-AVSNSDIISGATLS 217 (333)
T ss_pred eEEEEEcccchhHHHHHHHHHhcccceEEEeecCChHHHHHHHHHhhhcccceEEEEEehhhhhc-ccccCceEEecccc
Confidence 4567889999888888776544 2 4 89999999999999999775422 12234445 67789999999874
Q ss_pred CCCCCCCCCCCChhhhcCCCEEEEEe--eCCCchHHHHHHHHCCCeeeccHHH
Q 010101 438 GMEPNSDQSPVPKEALKAYELVFDAV--YTPRNTRLLREAAEVGATVVSGVEM 488 (518)
Q Consensus 438 g~~~~~~~~~~~~~~l~~~~~v~Di~--Y~P~~T~ll~~A~~~G~~~i~G~~m 488 (518)
- .|. +-.+|+.++ .-+|++ |.|..-..-.++-+.+|..+|-.+-
T Consensus 218 t-ePi-----lfgewlkpg-thIdlVGsf~p~mhEcDdelIq~a~vfVDsre~ 263 (333)
T KOG3007|consen 218 T-EPI-----LFGEWLKPG-THIDLVGSFKPVMHECDDELIQSACVFVDSREH 263 (333)
T ss_pred C-Cce-----eeeeeecCC-ceEeeeccCCchHHHHhHHHhhhheEEEecchH
Confidence 2 232 345677775 567886 5577777777777789998887553
No 225
>PRK07066 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=96.34 E-value=0.009 Score=61.38 Aligned_cols=39 Identities=26% Similarity=0.375 Sum_probs=35.5
Q ss_pred cEEEEEccchhHHHHHHHHHHCCCeEEEEeCCHHHHHHH
Q 010101 368 KIFVLVGAGGAGRALAFGAKSRGARVIIFNRNYERAKAL 406 (518)
Q Consensus 368 k~vlvlGaGg~araia~~L~~~G~~v~i~nRt~~ka~~l 406 (518)
++|.|||+|-||+.++..++..|++|++++++++..+.+
T Consensus 8 ~~VaVIGaG~MG~giA~~~a~aG~~V~l~D~~~~~~~~~ 46 (321)
T PRK07066 8 KTFAAIGSGVIGSGWVARALAHGLDVVAWDPAPGAEAAL 46 (321)
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCeEEEEeCCHHHHHHH
Confidence 689999999999999999999999999999998876554
No 226
>COG1064 AdhP Zn-dependent alcohol dehydrogenases [General function prediction only]
Probab=96.34 E-value=0.01 Score=61.03 Aligned_cols=69 Identities=29% Similarity=0.388 Sum_probs=52.9
Q ss_pred CCcEEEEEccchhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHhcCcc-cccc--c-ccccCCCCccEEEEcCC
Q 010101 366 AGKIFVLVGAGGAGRALAFGAKSRGARVIIFNRNYERAKALADAVSGEA-LHFE--Y-LHEFFPEKGMILANASA 436 (518)
Q Consensus 366 ~~k~vlvlGaGg~araia~~L~~~G~~v~i~nRt~~ka~~la~~~~~~~-~~~~--~-l~~~~~~~~divInatp 436 (518)
.|++++|+|+||.|-.++..++.+|++|+.++|+.+|. ++|++++... +... + .+. ..+.+|++|++.+
T Consensus 166 pG~~V~I~G~GGlGh~avQ~Aka~ga~Via~~~~~~K~-e~a~~lGAd~~i~~~~~~~~~~-~~~~~d~ii~tv~ 238 (339)
T COG1064 166 PGKWVAVVGAGGLGHMAVQYAKAMGAEVIAITRSEEKL-ELAKKLGADHVINSSDSDALEA-VKEIADAIIDTVG 238 (339)
T ss_pred CCCEEEEECCcHHHHHHHHHHHHcCCeEEEEeCChHHH-HHHHHhCCcEEEEcCCchhhHH-hHhhCcEEEECCC
Confidence 48999999999999998888888999999999999985 6778887653 2221 1 111 1123899999987
No 227
>PRK07523 gluconate 5-dehydrogenase; Provisional
Probab=96.33 E-value=0.0092 Score=58.61 Aligned_cols=48 Identities=31% Similarity=0.479 Sum_probs=42.3
Q ss_pred ccCCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHhc
Q 010101 364 PIAGKIFVLVGA-GGAGRALAFGAKSRGARVIIFNRNYERAKALADAVS 411 (518)
Q Consensus 364 ~l~~k~vlvlGa-Gg~araia~~L~~~G~~v~i~nRt~~ka~~la~~~~ 411 (518)
++++|+++|.|+ |+.|++++..|.+.|++|.+++|+.++.+++.+.+.
T Consensus 7 ~~~~k~vlItGa~g~iG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~i~ 55 (255)
T PRK07523 7 DLTGRRALVTGSSQGIGYALAEGLAQAGAEVILNGRDPAKLAAAAESLK 55 (255)
T ss_pred CCCCCEEEEECCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHH
Confidence 467899999997 789999999999999999999999988887766653
No 228
>PRK06522 2-dehydropantoate 2-reductase; Reviewed
Probab=96.32 E-value=0.011 Score=59.72 Aligned_cols=66 Identities=18% Similarity=0.164 Sum_probs=48.9
Q ss_pred EEEEEccchhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHhcCcc---------cccccccccCCCCccEEEEcCCC
Q 010101 369 IFVLVGAGGAGRALAFGAKSRGARVIIFNRNYERAKALADAVSGEA---------LHFEYLHEFFPEKGMILANASAI 437 (518)
Q Consensus 369 ~vlvlGaGg~araia~~L~~~G~~v~i~nRt~~ka~~la~~~~~~~---------~~~~~l~~~~~~~~divInatp~ 437 (518)
++.|+|+|.+|..++..|.+.|.+|++++|+.++.+.+.+. +... ....+..+ ...+|+||-||+.
T Consensus 2 ~I~IiG~G~~G~~~a~~L~~~g~~V~~~~r~~~~~~~~~~~-g~~~~~~~~~~~~~~~~~~~~--~~~~d~vila~k~ 76 (304)
T PRK06522 2 KIAILGAGAIGGLFGAALAQAGHDVTLVARRGAHLDALNEN-GLRLEDGEITVPVLAADDPAE--LGPQDLVILAVKA 76 (304)
T ss_pred EEEEECCCHHHHHHHHHHHhCCCeEEEEECChHHHHHHHHc-CCcccCCceeecccCCCChhH--cCCCCEEEEeccc
Confidence 68999999999999999999999999999988887777543 2111 01112222 2568999999874
No 229
>KOG1201 consensus Hydroxysteroid 17-beta dehydrogenase 11 [Secondary metabolites biosynthesis, transport and catabolism]
Probab=96.32 E-value=0.0074 Score=60.37 Aligned_cols=74 Identities=26% Similarity=0.462 Sum_probs=55.4
Q ss_pred cccCCcEEEEEccc-hhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHhcC--cc----ccc---ccc-------cccCC
Q 010101 363 SPIAGKIFVLVGAG-GAGRALAFGAKSRGARVIIFNRNYERAKALADAVSG--EA----LHF---EYL-------HEFFP 425 (518)
Q Consensus 363 ~~l~~k~vlvlGaG-g~araia~~L~~~G~~v~i~nRt~~ka~~la~~~~~--~~----~~~---~~l-------~~~~~ 425 (518)
.++.|+.|||-|+| |.||++|..++++|+++.+++.+.+-.++-.+.+.. ++ +++ +++ .+ ..
T Consensus 34 k~v~g~~vLITGgg~GlGr~ialefa~rg~~~vl~Din~~~~~etv~~~~~~g~~~~y~cdis~~eei~~~a~~Vk~-e~ 112 (300)
T KOG1201|consen 34 KSVSGEIVLITGGGSGLGRLIALEFAKRGAKLVLWDINKQGNEETVKEIRKIGEAKAYTCDISDREEIYRLAKKVKK-EV 112 (300)
T ss_pred hhccCCEEEEeCCCchHHHHHHHHHHHhCCeEEEEeccccchHHHHHHHHhcCceeEEEecCCCHHHHHHHHHHHHH-hc
Confidence 45789999999997 799999999999999999999998877777766652 11 122 222 12 34
Q ss_pred CCccEEEEcCCC
Q 010101 426 EKGMILANASAI 437 (518)
Q Consensus 426 ~~~divInatp~ 437 (518)
...|++||...+
T Consensus 113 G~V~ILVNNAGI 124 (300)
T KOG1201|consen 113 GDVDILVNNAGI 124 (300)
T ss_pred CCceEEEecccc
Confidence 578999997654
No 230
>PRK07680 late competence protein ComER; Validated
Probab=96.31 E-value=0.007 Score=60.71 Aligned_cols=117 Identities=14% Similarity=0.073 Sum_probs=71.7
Q ss_pred EEEEEccchhHHHHHHHHHHCCC----eEEEEeCCHHHHHHHHHHh-cCcccccccccccCCCCccEEEEcCCCCCCCCC
Q 010101 369 IFVLVGAGGAGRALAFGAKSRGA----RVIIFNRNYERAKALADAV-SGEALHFEYLHEFFPEKGMILANASAIGMEPNS 443 (518)
Q Consensus 369 ~vlvlGaGg~araia~~L~~~G~----~v~i~nRt~~ka~~la~~~-~~~~~~~~~l~~~~~~~~divInatp~g~~~~~ 443 (518)
++.|||+|.+|.+++.+|.+.|. +|++++|+.++++.+++.+ +... ..+..+ ...++|+||-|++......
T Consensus 2 ~I~iIG~G~mG~ala~~L~~~g~~~~~~v~v~~r~~~~~~~~~~~~~g~~~--~~~~~~-~~~~aDiVilav~p~~~~~- 77 (273)
T PRK07680 2 NIGFIGTGNMGTILIEAFLESGAVKPSQLTITNRTPAKAYHIKERYPGIHV--AKTIEE-VISQSDLIFICVKPLDIYP- 77 (273)
T ss_pred EEEEECccHHHHHHHHHHHHCCCCCcceEEEECCCHHHHHHHHHHcCCeEE--ECCHHH-HHHhCCEEEEecCHHHHHH-
Confidence 58999999999999999998883 6999999999998888765 2221 112212 2356899999986432110
Q ss_pred CCCCCCh--hhhcCCCEEEEEeeCCCchHHHHHHH-HCCCeeeccHHHHHHHH
Q 010101 444 DQSPVPK--EALKAYELVFDAVYTPRNTRLLREAA-EVGATVVSGVEMFIRQA 493 (518)
Q Consensus 444 ~~~~~~~--~~l~~~~~v~Di~Y~P~~T~ll~~A~-~~G~~~i~G~~ml~~Qa 493 (518)
.+.. ..+.++.+++++.- +....-++... ....+++++...-..++
T Consensus 78 ---vl~~l~~~l~~~~~iis~~a-g~~~~~L~~~~~~~~~r~~p~~~~~~~~G 126 (273)
T PRK07680 78 ---LLQKLAPHLTDEHCLVSITS-PISVEQLETLVPCQVARIIPSITNRALSG 126 (273)
T ss_pred ---HHHHHHhhcCCCCEEEEECC-CCCHHHHHHHcCCCEEEECCChHHHHhhc
Confidence 0110 12455678888873 33333333222 22346777655433333
No 231
>PLN02688 pyrroline-5-carboxylate reductase
Probab=96.30 E-value=0.0081 Score=59.84 Aligned_cols=65 Identities=18% Similarity=0.192 Sum_probs=48.5
Q ss_pred EEEEEccchhHHHHHHHHHHCCC----eEEEE-eCCHHHHHHHHHHhcCcccccccccccCCCCccEEEEcCCC
Q 010101 369 IFVLVGAGGAGRALAFGAKSRGA----RVIIF-NRNYERAKALADAVSGEALHFEYLHEFFPEKGMILANASAI 437 (518)
Q Consensus 369 ~vlvlGaGg~araia~~L~~~G~----~v~i~-nRt~~ka~~la~~~~~~~~~~~~l~~~~~~~~divInatp~ 437 (518)
++.|||.|.||.+++..|.+.|+ +|+++ ||+.++++.+.+ .+... ..+..+ ...++|+||-|++.
T Consensus 2 kI~~IG~G~mG~a~a~~L~~~g~~~~~~i~v~~~r~~~~~~~~~~-~g~~~--~~~~~e-~~~~aDvVil~v~~ 71 (266)
T PLN02688 2 RVGFIGAGKMAEAIARGLVASGVVPPSRISTADDSNPARRDVFQS-LGVKT--AASNTE-VVKSSDVIILAVKP 71 (266)
T ss_pred eEEEECCcHHHHHHHHHHHHCCCCCcceEEEEeCCCHHHHHHHHH-cCCEE--eCChHH-HHhcCCEEEEEECc
Confidence 58899999999999999999886 89999 999999877654 44322 112222 23467999988853
No 232
>PRK05867 short chain dehydrogenase; Provisional
Probab=96.30 E-value=0.0095 Score=58.50 Aligned_cols=47 Identities=32% Similarity=0.512 Sum_probs=42.7
Q ss_pred ccCCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHh
Q 010101 364 PIAGKIFVLVGA-GGAGRALAFGAKSRGARVIIFNRNYERAKALADAV 410 (518)
Q Consensus 364 ~l~~k~vlvlGa-Gg~araia~~L~~~G~~v~i~nRt~~ka~~la~~~ 410 (518)
++++|+++|.|+ ||.|++++..|.+.|++|.+++|+.++++++++++
T Consensus 6 ~~~~k~vlVtGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l 53 (253)
T PRK05867 6 DLHGKRALITGASTGIGKRVALAYVEAGAQVAIAARHLDALEKLADEI 53 (253)
T ss_pred cCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHH
Confidence 467899999998 78999999999999999999999999998888766
No 233
>PRK06500 short chain dehydrogenase; Provisional
Probab=96.29 E-value=0.013 Score=57.08 Aligned_cols=72 Identities=21% Similarity=0.200 Sum_probs=53.3
Q ss_pred cCCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHhcCcc--c--ccccc----------cccCCCCcc
Q 010101 365 IAGKIFVLVGA-GGAGRALAFGAKSRGARVIIFNRNYERAKALADAVSGEA--L--HFEYL----------HEFFPEKGM 429 (518)
Q Consensus 365 l~~k~vlvlGa-Gg~araia~~L~~~G~~v~i~nRt~~ka~~la~~~~~~~--~--~~~~l----------~~~~~~~~d 429 (518)
+++++++|.|+ |+.|++++..|.+.|++|++++|+.++.+++.++++... + ++.+. .+ .....|
T Consensus 4 ~~~k~vlItGasg~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~-~~~~id 82 (249)
T PRK06500 4 LQGKTALITGGTSGIGLETARQFLAEGARVAITGRDPASLEAARAELGESALVIRADAGDVAAQKALAQALAE-AFGRLD 82 (249)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHH-HhCCCC
Confidence 46789999998 789999999999999999999999888888877765432 1 11111 11 123579
Q ss_pred EEEEcCCC
Q 010101 430 ILANASAI 437 (518)
Q Consensus 430 ivInatp~ 437 (518)
++||+...
T Consensus 83 ~vi~~ag~ 90 (249)
T PRK06500 83 AVFINAGV 90 (249)
T ss_pred EEEECCCC
Confidence 99998754
No 234
>PRK08862 short chain dehydrogenase; Provisional
Probab=96.28 E-value=0.0098 Score=57.87 Aligned_cols=46 Identities=22% Similarity=0.351 Sum_probs=41.3
Q ss_pred cCCcEEEEEccc-hhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHh
Q 010101 365 IAGKIFVLVGAG-GAGRALAFGAKSRGARVIIFNRNYERAKALADAV 410 (518)
Q Consensus 365 l~~k~vlvlGaG-g~araia~~L~~~G~~v~i~nRt~~ka~~la~~~ 410 (518)
+++|+++|.|++ |.|++++..|++.|++|.+++|+.++.+++.+++
T Consensus 3 ~~~k~~lVtGas~GIG~aia~~la~~G~~V~~~~r~~~~l~~~~~~i 49 (227)
T PRK08862 3 IKSSIILITSAGSVLGRTISCHFARLGATLILCDQDQSALKDTYEQC 49 (227)
T ss_pred CCCeEEEEECCccHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHH
Confidence 568999999985 7999999999999999999999999988887655
No 235
>PRK06035 3-hydroxyacyl-CoA dehydrogenase; Validated
Probab=96.27 E-value=0.012 Score=59.60 Aligned_cols=39 Identities=28% Similarity=0.304 Sum_probs=35.7
Q ss_pred cEEEEEccchhHHHHHHHHHHCCCeEEEEeCCHHHHHHH
Q 010101 368 KIFVLVGAGGAGRALAFGAKSRGARVIIFNRNYERAKAL 406 (518)
Q Consensus 368 k~vlvlGaGg~araia~~L~~~G~~v~i~nRt~~ka~~l 406 (518)
++|.|||+|-||.+++..|+..|++|++++|++++.++.
T Consensus 4 ~~I~ViGaG~mG~~iA~~la~~G~~V~l~d~~~~~l~~~ 42 (291)
T PRK06035 4 KVIGVVGSGVMGQGIAQVFARTGYDVTIVDVSEEILKNA 42 (291)
T ss_pred cEEEEECccHHHHHHHHHHHhcCCeEEEEeCCHHHHHHH
Confidence 579999999999999999999999999999999887653
No 236
>PRK06487 glycerate dehydrogenase; Provisional
Probab=96.26 E-value=0.0095 Score=61.18 Aligned_cols=37 Identities=35% Similarity=0.377 Sum_probs=34.1
Q ss_pred ccCCcEEEEEccchhHHHHHHHHHHCCCeEEEEeCCH
Q 010101 364 PIAGKIFVLVGAGGAGRALAFGAKSRGARVIIFNRNY 400 (518)
Q Consensus 364 ~l~~k~vlvlGaGg~araia~~L~~~G~~v~i~nRt~ 400 (518)
.+.||++.|+|.|.+|++++..|...|++|..++|..
T Consensus 145 ~l~gktvgIiG~G~IG~~vA~~l~~fgm~V~~~~~~~ 181 (317)
T PRK06487 145 ELEGKTLGLLGHGELGGAVARLAEAFGMRVLIGQLPG 181 (317)
T ss_pred ccCCCEEEEECCCHHHHHHHHHHhhCCCEEEEECCCC
Confidence 5789999999999999999999999999999999863
No 237
>COG0673 MviM Predicted dehydrogenases and related proteins [General function prediction only]
Probab=96.25 E-value=0.025 Score=58.17 Aligned_cols=121 Identities=21% Similarity=0.248 Sum_probs=79.6
Q ss_pred cEEEEEccchhH-HHHHHHHHHCC--C-eEEEEeCCHHHHHHHHHHhcCc--ccccccccccCCCCccEEEEcCCCCCCC
Q 010101 368 KIFVLVGAGGAG-RALAFGAKSRG--A-RVIIFNRNYERAKALADAVSGE--ALHFEYLHEFFPEKGMILANASAIGMEP 441 (518)
Q Consensus 368 k~vlvlGaGg~a-raia~~L~~~G--~-~v~i~nRt~~ka~~la~~~~~~--~~~~~~l~~~~~~~~divInatp~g~~~ 441 (518)
.++.|||+|+.+ +..+.++...+ + -+.+++|+.+++++++++++.. +-+++++-+ ..+.|+|+.+||...+.
T Consensus 4 irvgiiG~G~~~~~~~~~~~~~~~~~~~~vav~d~~~~~a~~~a~~~~~~~~~~~~~~ll~--~~~iD~V~Iatp~~~H~ 81 (342)
T COG0673 4 IRVGIIGAGGIAGKAHLPALAALGGGLELVAVVDRDPERAEAFAEEFGIAKAYTDLEELLA--DPDIDAVYIATPNALHA 81 (342)
T ss_pred eEEEEEcccHHHHHHhHHHHHhCCCceEEEEEecCCHHHHHHHHHHcCCCcccCCHHHHhc--CCCCCEEEEcCCChhhH
Confidence 589999999655 56777887765 4 6889999999999999999865 234444322 23479999999976543
Q ss_pred CCCCCCCChhhhcCCC-EEEEEeeCCC------chHHHHHHHHCCCeeeccHHHHHHHHHHHHH
Q 010101 442 NSDQSPVPKEALKAYE-LVFDAVYTPR------NTRLLREAAEVGATVVSGVEMFIRQALGQFR 498 (518)
Q Consensus 442 ~~~~~~~~~~~l~~~~-~v~Di~Y~P~------~T~ll~~A~~~G~~~i~G~~ml~~Qa~~qf~ 498 (518)
. +....|..+. ++++ +|- -..+++.|+++|..+.-|...-...+....+
T Consensus 82 e-----~~~~AL~aGkhVl~E---KPla~t~~ea~~l~~~a~~~~~~l~v~~~~Rf~p~~~~~k 137 (342)
T COG0673 82 E-----LALAALEAGKHVLCE---KPLALTLEEAEELVELARKAGVKLMVGFNRRFDPAVQALK 137 (342)
T ss_pred H-----HHHHHHhcCCEEEEc---CCCCCCHHHHHHHHHHHHHcCCceeeehhhhcCHHHHHHH
Confidence 2 2233454443 3322 343 1456677777888877777665554444443
No 238
>PRK06932 glycerate dehydrogenase; Provisional
Probab=96.25 E-value=0.0085 Score=61.45 Aligned_cols=37 Identities=19% Similarity=0.291 Sum_probs=34.0
Q ss_pred ccCCcEEEEEccchhHHHHHHHHHHCCCeEEEEeCCH
Q 010101 364 PIAGKIFVLVGAGGAGRALAFGAKSRGARVIIFNRNY 400 (518)
Q Consensus 364 ~l~~k~vlvlGaGg~araia~~L~~~G~~v~i~nRt~ 400 (518)
.+.||++.|+|.|..|++++..|...|++|..++|+.
T Consensus 144 ~l~gktvgIiG~G~IG~~va~~l~~fg~~V~~~~~~~ 180 (314)
T PRK06932 144 DVRGSTLGVFGKGCLGTEVGRLAQALGMKVLYAEHKG 180 (314)
T ss_pred ccCCCEEEEECCCHHHHHHHHHHhcCCCEEEEECCCc
Confidence 5789999999999999999999999999999998864
No 239
>cd00958 DhnA Class I fructose-1,6-bisphosphate (FBP) aldolases of the archaeal type (DhnA homologs) found in bacteria and archaea. Catalysis of the enzymes proceeds via a Schiff-base mechanism like other class I aldolases, although this subfamily is clearly divergent based on sequence similarity to other class I and class II (metal dependent) aldolase subfamilies.
Probab=96.25 E-value=0.095 Score=51.24 Aligned_cols=153 Identities=21% Similarity=0.243 Sum_probs=88.6
Q ss_pred CCCHHHHHHHHHHHHhhCCCEEEEEeccCCCCcHHHHHHHhcC--CCCcEEEEeecCCCCCCCCCCcHHHHHHHHHHHhh
Q 010101 17 CETTEEMQASIEQAKVEGADLVELCIDSMEFSHISEVDKLIQH--PTLPAIVSYRLKSSRKSSDEACKNTCLQVLRRALD 94 (518)
Q Consensus 17 ~~~~~~~~~~~~~~~~~g~D~vElRlD~l~~~~~~~l~~l~~~--~~~PiI~T~R~~~eGG~~~~~~~~~~~~ll~~~~~ 94 (518)
..++++.. +.+.+.|+|.+=+..- .+....+. .+.|++..++...-=|....+ .+....-++.+++
T Consensus 20 ~~d~~~~~---~~~~~~g~~av~v~~~--------~~~~~~~~~~~~~~~i~~~~~~~~i~~p~~~-~~~~~~~v~~a~~ 87 (235)
T cd00958 20 LEDPEETV---KLAAEGGADAVALTKG--------IARAYGREYAGDIPLIVKLNGSTSLSPKDDN-DKVLVASVEDAVR 87 (235)
T ss_pred ccCHHHHH---HHHHhcCCCEEEeChH--------HHHhcccccCCCCcEEEEECCCCCCCCCCCC-chhhhcCHHHHHH
Confidence 34455444 4555578888843321 22222211 356788777632111110122 4556666889999
Q ss_pred cCCcEEEEecCCCCc-------hhhHHHh-hcCCCcEEEEeeecCCCCC---CChhHHHHHHHHHHHcCCCEEEEEcccC
Q 010101 95 LDVEFVEMDYEVASD-------PLMSEII-YSRSNTKIIVSSYLNGGGK---PTTEKLGDVIACMQATGADVMKLEIAVD 163 (518)
Q Consensus 95 ~g~~yvDiEl~~~~~-------~~~~l~~-~~~~~~kiI~S~H~f~~~t---p~~~~l~~~~~~~~~~gadivKia~~~~ 163 (518)
.|++.||+.++.... .+.++.+ .++.+.++|+--|..+... .+.+++....+.+.+.|||++|+-.+
T Consensus 88 ~Ga~~v~~~~~~~~~~~~~~~~~i~~v~~~~~~~g~~~iie~~~~g~~~~~~~~~~~i~~~~~~a~~~GaD~Ik~~~~-- 165 (235)
T cd00958 88 LGADAVGVTVYVGSEEEREMLEELARVAAEAHKYGLPLIAWMYPRGPAVKNEKDPDLIAYAARIGAELGADIVKTKYT-- 165 (235)
T ss_pred CCCCEEEEEEecCCchHHHHHHHHHHHHHHHHHcCCCEEEEEeccCCcccCccCHHHHHHHHHHHHHHCCCEEEecCC--
Confidence 999999999876431 3344444 3557899999665421111 13355666577788999999999432
Q ss_pred CcccHHHHHHHhccCCCCEEEE
Q 010101 164 SITDLAPVFEMLTHCQVPLIAL 185 (518)
Q Consensus 164 ~~~D~~~l~~~~~~~~~p~i~~ 185 (518)
.|...+.++.+....|++++
T Consensus 166 --~~~~~~~~i~~~~~~pvv~~ 185 (235)
T cd00958 166 --GDAESFKEVVEGCPVPVVIA 185 (235)
T ss_pred --CCHHHHHHHHhcCCCCEEEe
Confidence 25555555555566786554
No 240
>COG1648 CysG Siroheme synthase (precorrin-2 oxidase/ferrochelatase domain) [Coenzyme metabolism]
Probab=96.23 E-value=0.014 Score=56.16 Aligned_cols=73 Identities=18% Similarity=0.191 Sum_probs=51.9
Q ss_pred cccCCcEEEEEccchhHHHHHHHHHHCCCeEEEEeCCH-HHHHHHHHHhcCcccccccccccCCCCccEEEEcCC
Q 010101 363 SPIAGKIFVLVGAGGAGRALAFGAKSRGARVIIFNRNY-ERAKALADAVSGEALHFEYLHEFFPEKGMILANASA 436 (518)
Q Consensus 363 ~~l~~k~vlvlGaGg~araia~~L~~~G~~v~i~nRt~-~ka~~la~~~~~~~~~~~~l~~~~~~~~divInatp 436 (518)
.+++||+|+|+|+|..|.-=+..|.+.|++|+|++.+. +..+.+++..+..++. .....-....+++||-||+
T Consensus 8 ~~l~~k~VlvvGgG~va~rKa~~ll~~ga~v~Vvs~~~~~el~~~~~~~~i~~~~-~~~~~~~~~~~~lviaAt~ 81 (210)
T COG1648 8 LDLEGKKVLVVGGGSVALRKARLLLKAGADVTVVSPEFEPELKALIEEGKIKWIE-REFDAEDLDDAFLVIAATD 81 (210)
T ss_pred EEcCCCEEEEECCCHHHHHHHHHHHhcCCEEEEEcCCccHHHHHHHHhcCcchhh-cccChhhhcCceEEEEeCC
Confidence 56889999999999999999999999999999999887 5555555554422222 1111102234788887775
No 241
>COG0111 SerA Phosphoglycerate dehydrogenase and related dehydrogenases [Amino acid transport and metabolism]
Probab=96.21 E-value=0.01 Score=60.99 Aligned_cols=40 Identities=35% Similarity=0.506 Sum_probs=35.7
Q ss_pred cccCCcEEEEEccchhHHHHHHHHHHCCCeEEEEeCCHHH
Q 010101 363 SPIAGKIFVLVGAGGAGRALAFGAKSRGARVIIFNRNYER 402 (518)
Q Consensus 363 ~~l~~k~vlvlGaGg~araia~~L~~~G~~v~i~nRt~~k 402 (518)
..+.||++.|||.|..|+.++..|...|.+|..+++...+
T Consensus 138 ~el~gkTvGIiG~G~IG~~va~~l~afgm~v~~~d~~~~~ 177 (324)
T COG0111 138 TELAGKTVGIIGLGRIGRAVAKRLKAFGMKVIGYDPYSPR 177 (324)
T ss_pred ccccCCEEEEECCCHHHHHHHHHHHhCCCeEEEECCCCch
Confidence 4577999999999999999999999999999999994333
No 242
>PLN02477 glutamate dehydrogenase
Probab=96.21 E-value=0.055 Score=57.32 Aligned_cols=129 Identities=21% Similarity=0.294 Sum_probs=82.9
Q ss_pred HHHHHHHHHHHHHhhccCCCCCCCCcccCCcEEEEEccchhHHHHHHHHHHCCCeEE-EEeCC----------HHHHHHH
Q 010101 338 CESAISAIEDALRERQGINGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGARVI-IFNRN----------YERAKAL 406 (518)
Q Consensus 338 ~~G~~~~l~~~l~~~~~~~~~~~~~~~l~~k~vlvlGaGg~araia~~L~~~G~~v~-i~nRt----------~~ka~~l 406 (518)
+.|...+++..++. .| .+++|++++|.|.|.+|+.++..|.+.|++|+ |.+.+ .+...+.
T Consensus 186 g~Gv~~~~~~~~~~-~g--------~~l~g~~VaIqGfGnVG~~~A~~L~e~GakVVaVsD~~G~iy~~~GLD~~~L~~~ 256 (410)
T PLN02477 186 GRGVVFATEALLAE-HG--------KSIAGQTFVIQGFGNVGSWAAQLIHEKGGKIVAVSDITGAVKNENGLDIPALRKH 256 (410)
T ss_pred hHHHHHHHHHHHHH-cC--------CCccCCEEEEECCCHHHHHHHHHHHHcCCEEEEEECCCCeEECCCCCCHHHHHHH
Confidence 67777777776654 23 47889999999999999999999999999766 87776 5655444
Q ss_pred HHHhcC-------cccccccccccCCCCccEEEEcCCCCCCCCCCCCCCChhhh--cCCCEEEEEeeCCCchHHHHHH-H
Q 010101 407 ADAVSG-------EALHFEYLHEFFPEKGMILANASAIGMEPNSDQSPVPKEAL--KAYELVFDAVYTPRNTRLLREA-A 476 (518)
Q Consensus 407 a~~~~~-------~~~~~~~l~~~~~~~~divInatp~g~~~~~~~~~~~~~~l--~~~~~v~Di~Y~P~~T~ll~~A-~ 476 (518)
.++-+. +.++-+++ ...++||+|-|.--+ . +..+.. -...+|+.-.-+|- |+=..+. +
T Consensus 257 k~~~g~l~~~~~a~~i~~~e~---l~~~~DvliP~Al~~---~-----I~~~na~~i~ak~I~egAN~p~-t~ea~~~L~ 324 (410)
T PLN02477 257 VAEGGGLKGFPGGDPIDPDDI---LVEPCDVLIPAALGG---V-----INKENAADVKAKFIVEAANHPT-DPEADEILR 324 (410)
T ss_pred HHhcCchhccccceEecCccc---eeccccEEeeccccc---c-----CCHhHHHHcCCcEEEeCCCCCC-CHHHHHHHH
Confidence 333221 11111221 124689998654222 2 222211 14578999988887 6544433 6
Q ss_pred HCCCeeeccHH
Q 010101 477 EVGATVVSGVE 487 (518)
Q Consensus 477 ~~G~~~i~G~~ 487 (518)
++|+.+++..-
T Consensus 325 ~rGI~~~PD~~ 335 (410)
T PLN02477 325 KKGVVVLPDIY 335 (410)
T ss_pred HCCcEEEChHH
Confidence 67887776554
No 243
>PRK08415 enoyl-(acyl carrier protein) reductase; Provisional
Probab=96.21 E-value=0.019 Score=57.48 Aligned_cols=72 Identities=18% Similarity=0.200 Sum_probs=50.4
Q ss_pred cCCcEEEEEcc---chhHHHHHHHHHHCCCeEEEEeCCH---HHHHHHHHHhcCc-c--cccccc----------cccCC
Q 010101 365 IAGKIFVLVGA---GGAGRALAFGAKSRGARVIIFNRNY---ERAKALADAVSGE-A--LHFEYL----------HEFFP 425 (518)
Q Consensus 365 l~~k~vlvlGa---Gg~araia~~L~~~G~~v~i~nRt~---~ka~~la~~~~~~-~--~~~~~l----------~~~~~ 425 (518)
+++|.++|.|+ +|.|++++..|++.|++|+++.|+. +++++++++++.. . .++.+. .+ ..
T Consensus 3 l~~k~~lItGas~~~GIG~aiA~~la~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~i~~-~~ 81 (274)
T PRK08415 3 MKGKKGLIVGVANNKSIAYGIAKACFEQGAELAFTYLNEALKKRVEPIAQELGSDYVYELDVSKPEHFKSLAESLKK-DL 81 (274)
T ss_pred cCCcEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEecCHHHHHHHHHHHHhcCCceEEEecCCCHHHHHHHHHHHHH-Hc
Confidence 45799999998 4999999999999999999999984 4556666655432 1 112111 11 12
Q ss_pred CCccEEEEcCCC
Q 010101 426 EKGMILANASAI 437 (518)
Q Consensus 426 ~~~divInatp~ 437 (518)
...|++||+...
T Consensus 82 g~iDilVnnAG~ 93 (274)
T PRK08415 82 GKIDFIVHSVAF 93 (274)
T ss_pred CCCCEEEECCcc
Confidence 457999998754
No 244
>PRK08159 enoyl-(acyl carrier protein) reductase; Provisional
Probab=96.19 E-value=0.02 Score=57.18 Aligned_cols=73 Identities=16% Similarity=0.161 Sum_probs=51.2
Q ss_pred ccCCcEEEEEcc---chhHHHHHHHHHHCCCeEEEEeCCH---HHHHHHHHHhcCcc---ccccc---c-------cccC
Q 010101 364 PIAGKIFVLVGA---GGAGRALAFGAKSRGARVIIFNRNY---ERAKALADAVSGEA---LHFEY---L-------HEFF 424 (518)
Q Consensus 364 ~l~~k~vlvlGa---Gg~araia~~L~~~G~~v~i~nRt~---~ka~~la~~~~~~~---~~~~~---l-------~~~~ 424 (518)
-+++|.++|.|+ +|.|++++..|++.|++|+++.|+. +++++++++++... .++.+ + .+ .
T Consensus 7 ~~~~k~~lItGas~~~GIG~aia~~la~~G~~V~l~~r~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~-~ 85 (272)
T PRK08159 7 LMAGKRGLILGVANNRSIAWGIAKACRAAGAELAFTYQGDALKKRVEPLAAELGAFVAGHCDVTDEASIDAVFETLEK-K 85 (272)
T ss_pred cccCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCchHHHHHHHHHHHhcCCceEEecCCCCHHHHHHHHHHHHH-h
Confidence 457899999998 5999999999999999999988873 56666766655211 11111 1 11 2
Q ss_pred CCCccEEEEcCCC
Q 010101 425 PEKGMILANASAI 437 (518)
Q Consensus 425 ~~~~divInatp~ 437 (518)
....|++||+...
T Consensus 86 ~g~iD~lv~nAG~ 98 (272)
T PRK08159 86 WGKLDFVVHAIGF 98 (272)
T ss_pred cCCCcEEEECCcc
Confidence 2457999998754
No 245
>PRK07531 bifunctional 3-hydroxyacyl-CoA dehydrogenase/thioesterase; Validated
Probab=96.19 E-value=0.011 Score=64.44 Aligned_cols=40 Identities=20% Similarity=0.241 Sum_probs=36.7
Q ss_pred cEEEEEccchhHHHHHHHHHHCCCeEEEEeCCHHHHHHHH
Q 010101 368 KIFVLVGAGGAGRALAFGAKSRGARVIIFNRNYERAKALA 407 (518)
Q Consensus 368 k~vlvlGaGg~araia~~L~~~G~~v~i~nRt~~ka~~la 407 (518)
++|.|||+|-||.+++..|+..|++|+++||++++.+.+.
T Consensus 5 ~kIavIG~G~MG~~iA~~la~~G~~V~v~D~~~~~~~~~~ 44 (495)
T PRK07531 5 MKAACIGGGVIGGGWAARFLLAGIDVAVFDPHPEAERIIG 44 (495)
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCeEEEEeCCHHHHHHHH
Confidence 4799999999999999999999999999999999887654
No 246
>PLN02858 fructose-bisphosphate aldolase
Probab=96.18 E-value=0.0081 Score=72.82 Aligned_cols=106 Identities=13% Similarity=0.076 Sum_probs=71.8
Q ss_pred CcEEEEEccchhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHhcCcc-cccccccccCCCCccEEEEcCCCCCCCCCCC
Q 010101 367 GKIFVLVGAGGAGRALAFGAKSRGARVIIFNRNYERAKALADAVSGEA-LHFEYLHEFFPEKGMILANASAIGMEPNSDQ 445 (518)
Q Consensus 367 ~k~vlvlGaGg~araia~~L~~~G~~v~i~nRt~~ka~~la~~~~~~~-~~~~~l~~~~~~~~divInatp~g~~~~~~~ 445 (518)
.+++-+||.|-||..++..|.+.|++|+++||+.++++++++. |... -+..+ ...++|+||-+.|-+- ....
T Consensus 4 ~~~IGfIGLG~MG~~mA~~L~~~G~~v~v~dr~~~~~~~l~~~-Ga~~~~s~~e----~a~~advVi~~l~~~~--~v~~ 76 (1378)
T PLN02858 4 AGVVGFVGLDSLSFELASSLLRSGFKVQAFEISTPLMEKFCEL-GGHRCDSPAE----AAKDAAALVVVLSHPD--QVDD 76 (1378)
T ss_pred CCeEEEEchhHHHHHHHHHHHHCCCeEEEEcCCHHHHHHHHHc-CCeecCCHHH----HHhcCCEEEEEcCChH--HHHH
Confidence 4679999999999999999999999999999999999998864 3322 12222 2346899997765431 1111
Q ss_pred CCCCh----hhhcCCCEEEEEeeC-CCch-HHHHHHHHCC
Q 010101 446 SPVPK----EALKAYELVFDAVYT-PRNT-RLLREAAEVG 479 (518)
Q Consensus 446 ~~~~~----~~l~~~~~v~Di~Y~-P~~T-~ll~~A~~~G 479 (518)
..+.. ..+.++.+++|+... |..+ .+.+.++++|
T Consensus 77 V~~g~~g~~~~l~~g~iivd~STi~p~~~~~la~~l~~~g 116 (1378)
T PLN02858 77 VFFGDEGAAKGLQKGAVILIRSTILPLQLQKLEKKLTERK 116 (1378)
T ss_pred HHhchhhHHhcCCCcCEEEECCCCCHHHHHHHHHHHHhcC
Confidence 11111 124567899999876 4444 3444556677
No 247
>PRK08265 short chain dehydrogenase; Provisional
Probab=96.16 E-value=0.012 Score=58.14 Aligned_cols=47 Identities=30% Similarity=0.440 Sum_probs=42.7
Q ss_pred cCCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHhc
Q 010101 365 IAGKIFVLVGA-GGAGRALAFGAKSRGARVIIFNRNYERAKALADAVS 411 (518)
Q Consensus 365 l~~k~vlvlGa-Gg~araia~~L~~~G~~v~i~nRt~~ka~~la~~~~ 411 (518)
+++|+++|.|+ ||.|++++..|.+.|++|++++|+.+++++++++++
T Consensus 4 ~~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~ 51 (261)
T PRK08265 4 LAGKVAIVTGGATLIGAAVARALVAAGARVAIVDIDADNGAAVAASLG 51 (261)
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhC
Confidence 56899999997 789999999999999999999999998888887765
No 248
>TIGR03026 NDP-sugDHase nucleotide sugar dehydrogenase. All of these enzymes contain three Pfam domains, pfam03721, pfam00984, and pfam03720 for the N-terminal, central, and C-terminal regions respectively.
Probab=96.15 E-value=0.025 Score=60.25 Aligned_cols=100 Identities=18% Similarity=0.144 Sum_probs=64.8
Q ss_pred EEEEEccchhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHhcC----------------ccccc-ccccccCCCCccEE
Q 010101 369 IFVLVGAGGAGRALAFGAKSRGARVIIFNRNYERAKALADAVSG----------------EALHF-EYLHEFFPEKGMIL 431 (518)
Q Consensus 369 ~vlvlGaGg~araia~~L~~~G~~v~i~nRt~~ka~~la~~~~~----------------~~~~~-~~l~~~~~~~~div 431 (518)
++.|||.|-+|.+++..|++.|++|++++|+.++.+.+.+.... ....+ .+..+ ...++|+|
T Consensus 2 kI~vIGlG~~G~~lA~~La~~G~~V~~~d~~~~~v~~l~~g~~~~~e~~l~~~~~~~~~~g~l~~~~~~~~-~~~~advv 80 (411)
T TIGR03026 2 KIAVIGLGYVGLPLAALLADLGHEVTGVDIDQEKVDKLNKGKSPIYEPGLDELLAKALAAGRLRATTDYED-AIRDADVI 80 (411)
T ss_pred EEEEECCCchhHHHHHHHHhcCCeEEEEECCHHHHHHhhcCCCCCCCCCHHHHHHHhhhcCCeEEECCHHH-HHhhCCEE
Confidence 58999999999999999999999999999999999887642100 00111 12222 24578999
Q ss_pred EEcCCCCCCCCC--CCCCCC---h---hhhcCCCEEEEEeeCCCch
Q 010101 432 ANASAIGMEPNS--DQSPVP---K---EALKAYELVFDAVYTPRNT 469 (518)
Q Consensus 432 Inatp~g~~~~~--~~~~~~---~---~~l~~~~~v~Di~Y~P~~T 469 (518)
|-|+|....... +-..+. . ..++++.+++|....|..|
T Consensus 81 ii~vpt~~~~~~~~d~~~v~~~~~~i~~~l~~g~lvi~~STv~pgt 126 (411)
T TIGR03026 81 IICVPTPLKEDGSPDLSYVESAAETIAKHLRKGATVVLESTVPPGT 126 (411)
T ss_pred EEEeCCCCCCCCCcChHHHHHHHHHHHHhcCCCCEEEEeCcCCCCc
Confidence 999886533210 000011 1 1245678899987665544
No 249
>PRK07984 enoyl-(acyl carrier protein) reductase; Provisional
Probab=96.15 E-value=0.02 Score=57.01 Aligned_cols=35 Identities=20% Similarity=0.365 Sum_probs=32.2
Q ss_pred cCCcEEEEEccc---hhHHHHHHHHHHCCCeEEEEeCC
Q 010101 365 IAGKIFVLVGAG---GAGRALAFGAKSRGARVIIFNRN 399 (518)
Q Consensus 365 l~~k~vlvlGaG---g~araia~~L~~~G~~v~i~nRt 399 (518)
+++|.++|.|++ |.|++++..|++.|++|.++.|+
T Consensus 4 l~~k~~lITGas~~~GIG~aia~~la~~G~~vil~~r~ 41 (262)
T PRK07984 4 LSGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQN 41 (262)
T ss_pred cCCCEEEEeCCCCCccHHHHHHHHHHHCCCEEEEEecc
Confidence 568999999986 89999999999999999999997
No 250
>PRK07063 short chain dehydrogenase; Provisional
Probab=96.15 E-value=0.013 Score=57.75 Aligned_cols=48 Identities=31% Similarity=0.421 Sum_probs=42.7
Q ss_pred ccCCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHhc
Q 010101 364 PIAGKIFVLVGA-GGAGRALAFGAKSRGARVIIFNRNYERAKALADAVS 411 (518)
Q Consensus 364 ~l~~k~vlvlGa-Gg~araia~~L~~~G~~v~i~nRt~~ka~~la~~~~ 411 (518)
.+++|+++|.|+ ||.|++++..|++.|++|.+++|+.++.+++++++.
T Consensus 4 ~l~~k~vlVtGas~gIG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~ 52 (260)
T PRK07063 4 RLAGKVALVTGAAQGIGAAIARAFAREGAAVALADLDAALAERAAAAIA 52 (260)
T ss_pred ccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHH
Confidence 367899999987 689999999999999999999999999888877763
No 251
>PRK01368 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=96.13 E-value=0.023 Score=61.30 Aligned_cols=35 Identities=14% Similarity=0.194 Sum_probs=30.7
Q ss_pred CCcEEEEEccchhHHHHHHHHHHCCCeEEEEeCCHH
Q 010101 366 AGKIFVLVGAGGAGRALAFGAKSRGARVIIFNRNYE 401 (518)
Q Consensus 366 ~~k~vlvlGaGg~araia~~L~~~G~~v~i~nRt~~ 401 (518)
.+++++|+|.|..|++++..|.+ |++|++++...+
T Consensus 5 ~~~~v~v~G~G~sG~a~~~~L~~-g~~v~v~D~~~~ 39 (454)
T PRK01368 5 TKQKIGVFGLGKTGISVYEELQN-KYDVIVYDDLKA 39 (454)
T ss_pred CCCEEEEEeecHHHHHHHHHHhC-CCEEEEECCCCC
Confidence 47899999999999999999995 999999996543
No 252
>PRK00066 ldh L-lactate dehydrogenase; Reviewed
Probab=96.13 E-value=0.017 Score=59.37 Aligned_cols=74 Identities=20% Similarity=0.262 Sum_probs=55.2
Q ss_pred CCcEEEEEccchhHHHHHHHHHHCCC--eEEEEeCCHHHHHHHHHHhcCcc-------cccccccccCCCCccEEEEcCC
Q 010101 366 AGKIFVLVGAGGAGRALAFGAKSRGA--RVIIFNRNYERAKALADAVSGEA-------LHFEYLHEFFPEKGMILANASA 436 (518)
Q Consensus 366 ~~k~vlvlGaGg~araia~~L~~~G~--~v~i~nRt~~ka~~la~~~~~~~-------~~~~~l~~~~~~~~divInatp 436 (518)
.++++.|+|+|.+|.++++.|...|. +|.+++++.++++..+.++.... +...+.+ ...++|+||.+..
T Consensus 5 ~~~ki~iiGaG~vG~~~a~~l~~~~~~~el~L~D~~~~~~~g~~~Dl~~~~~~~~~~~i~~~~~~--~~~~adivIitag 82 (315)
T PRK00066 5 QHNKVVLVGDGAVGSSYAYALVNQGIADELVIIDINKEKAEGDAMDLSHAVPFTSPTKIYAGDYS--DCKDADLVVITAG 82 (315)
T ss_pred CCCEEEEECCCHHHHHHHHHHHhcCCCCEEEEEeCCCchhHHHHHHHHhhccccCCeEEEeCCHH--HhCCCCEEEEecC
Confidence 35799999999999999999998887 89999999999888877665211 1111222 3577999998776
Q ss_pred CCCCC
Q 010101 437 IGMEP 441 (518)
Q Consensus 437 ~g~~~ 441 (518)
..-.|
T Consensus 83 ~~~k~ 87 (315)
T PRK00066 83 APQKP 87 (315)
T ss_pred CCCCC
Confidence 54333
No 253
>PRK07424 bifunctional sterol desaturase/short chain dehydrogenase; Validated
Probab=96.13 E-value=0.012 Score=62.57 Aligned_cols=74 Identities=27% Similarity=0.346 Sum_probs=50.6
Q ss_pred ccCCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHhcC--ccc--cccc---ccccCCCCccEEEEcC
Q 010101 364 PIAGKIFVLVGA-GGAGRALAFGAKSRGARVIIFNRNYERAKALADAVSG--EAL--HFEY---LHEFFPEKGMILANAS 435 (518)
Q Consensus 364 ~l~~k~vlvlGa-Gg~araia~~L~~~G~~v~i~nRt~~ka~~la~~~~~--~~~--~~~~---l~~~~~~~~divInat 435 (518)
.+++|+++|.|+ ||.|++++..|.+.|++|.+++|+.++.++....... ..+ ++.+ +.+ ...+.|++||+.
T Consensus 175 sl~gK~VLITGASgGIG~aLA~~La~~G~~Vi~l~r~~~~l~~~~~~~~~~v~~v~~Dvsd~~~v~~-~l~~IDiLInnA 253 (406)
T PRK07424 175 SLKGKTVAVTGASGTLGQALLKELHQQGAKVVALTSNSDKITLEINGEDLPVKTLHWQVGQEAALAE-LLEKVDILIINH 253 (406)
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhhcCCCeEEEEeeCCCHHHHHH-HhCCCCEEEECC
Confidence 456899999998 7899999999999999999999998766543322111 111 1111 222 235689999876
Q ss_pred CCC
Q 010101 436 AIG 438 (518)
Q Consensus 436 p~g 438 (518)
..+
T Consensus 254 Gi~ 256 (406)
T PRK07424 254 GIN 256 (406)
T ss_pred CcC
Confidence 543
No 254
>PRK08085 gluconate 5-dehydrogenase; Provisional
Probab=96.11 E-value=0.013 Score=57.41 Aligned_cols=48 Identities=33% Similarity=0.463 Sum_probs=42.3
Q ss_pred ccCCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHhc
Q 010101 364 PIAGKIFVLVGA-GGAGRALAFGAKSRGARVIIFNRNYERAKALADAVS 411 (518)
Q Consensus 364 ~l~~k~vlvlGa-Gg~araia~~L~~~G~~v~i~nRt~~ka~~la~~~~ 411 (518)
.+++|+++|.|+ ||.|++++..|.+.|++|.+++|+.++.+++.+++.
T Consensus 6 ~l~~k~~lItGas~giG~~ia~~L~~~G~~vvl~~r~~~~~~~~~~~l~ 54 (254)
T PRK08085 6 SLAGKNILITGSAQGIGFLLATGLAEYGAEIIINDITAERAELAVAKLR 54 (254)
T ss_pred cCCCCEEEEECCCChHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHHH
Confidence 467899999987 689999999999999999999999998888876653
No 255
>PLN02858 fructose-bisphosphate aldolase
Probab=96.10 E-value=0.019 Score=69.80 Aligned_cols=111 Identities=14% Similarity=0.025 Sum_probs=73.0
Q ss_pred CcEEEEEccchhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHhcCcccccccccccCCCCccEEEEcCCCCCCCCCCCC
Q 010101 367 GKIFVLVGAGGAGRALAFGAKSRGARVIIFNRNYERAKALADAVSGEALHFEYLHEFFPEKGMILANASAIGMEPNSDQS 446 (518)
Q Consensus 367 ~k~vlvlGaGg~araia~~L~~~G~~v~i~nRt~~ka~~la~~~~~~~~~~~~l~~~~~~~~divInatp~g~~~~~~~~ 446 (518)
.+++-+||.|-||.+++..|...|++|+++||+.++++.+++.......+..+ ...++|+||-+.|-.- .....
T Consensus 324 ~~~IGfIGlG~MG~~mA~~L~~~G~~V~v~dr~~~~~~~l~~~Ga~~~~s~~e----~~~~aDvVi~~V~~~~--~v~~V 397 (1378)
T PLN02858 324 VKRIGFIGLGAMGFGMASHLLKSNFSVCGYDVYKPTLVRFENAGGLAGNSPAE----VAKDVDVLVIMVANEV--QAENV 397 (1378)
T ss_pred CCeEEEECchHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCeecCCHHH----HHhcCCEEEEecCChH--HHHHH
Confidence 37899999999999999999999999999999999998887652111112222 2356899998877321 00000
Q ss_pred CCC-h---hhhcCCCEEEEEeeC-CCch-HHHHHHHH--CCCeee
Q 010101 447 PVP-K---EALKAYELVFDAVYT-PRNT-RLLREAAE--VGATVV 483 (518)
Q Consensus 447 ~~~-~---~~l~~~~~v~Di~Y~-P~~T-~ll~~A~~--~G~~~i 483 (518)
.+. . ..+.++.+++|+... |..+ .+-+.+++ +|+.++
T Consensus 398 l~g~~g~~~~l~~g~ivVd~STvsP~~~~~la~~l~~~g~g~~~l 442 (1378)
T PLN02858 398 LFGDLGAVSALPAGASIVLSSTVSPGFVIQLERRLENEGRDIKLV 442 (1378)
T ss_pred HhchhhHHhcCCCCCEEEECCCCCHHHHHHHHHHHHhhCCCcEEE
Confidence 011 1 124567899999876 5444 34455566 665544
No 256
>PRK12367 short chain dehydrogenase; Provisional
Probab=96.10 E-value=0.01 Score=58.58 Aligned_cols=74 Identities=24% Similarity=0.259 Sum_probs=48.4
Q ss_pred cccCCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHhcCccc--ccc---cccccCCCCccEEEEcCC
Q 010101 363 SPIAGKIFVLVGA-GGAGRALAFGAKSRGARVIIFNRNYERAKALADAVSGEAL--HFE---YLHEFFPEKGMILANASA 436 (518)
Q Consensus 363 ~~l~~k~vlvlGa-Gg~araia~~L~~~G~~v~i~nRt~~ka~~la~~~~~~~~--~~~---~l~~~~~~~~divInatp 436 (518)
..+++++++|.|+ ||.|++++..|++.|++|++++|+.....+....-....+ ++. ++.+ .....|++||+..
T Consensus 10 ~~l~~k~~lITGas~gIG~ala~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~-~~~~iDilVnnAG 88 (245)
T PRK12367 10 STWQGKRIGITGASGALGKALTKAFRAKGAKVIGLTHSKINNSESNDESPNEWIKWECGKEESLDK-QLASLDVLILNHG 88 (245)
T ss_pred HhhCCCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEECCchhhhhhhccCCCeEEEeeCCCHHHHHH-hcCCCCEEEECCc
Confidence 4567899999998 6899999999999999999999986322111111111111 111 1222 3456899999875
Q ss_pred C
Q 010101 437 I 437 (518)
Q Consensus 437 ~ 437 (518)
.
T Consensus 89 ~ 89 (245)
T PRK12367 89 I 89 (245)
T ss_pred c
Confidence 4
No 257
>PRK14619 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Provisional
Probab=96.10 E-value=0.007 Score=61.84 Aligned_cols=35 Identities=34% Similarity=0.461 Sum_probs=32.3
Q ss_pred CcEEEEEccchhHHHHHHHHHHCCCeEEEEeCCHH
Q 010101 367 GKIFVLVGAGGAGRALAFGAKSRGARVIIFNRNYE 401 (518)
Q Consensus 367 ~k~vlvlGaGg~araia~~L~~~G~~v~i~nRt~~ 401 (518)
+.++.|||+|-+|++++..|.+.|++|++++|+..
T Consensus 4 ~m~I~iiG~G~~G~~lA~~l~~~G~~V~~~~r~~~ 38 (308)
T PRK14619 4 PKTIAILGAGAWGSTLAGLASANGHRVRVWSRRSG 38 (308)
T ss_pred CCEEEEECccHHHHHHHHHHHHCCCEEEEEeCCCC
Confidence 56899999999999999999999999999999853
No 258
>PRK06182 short chain dehydrogenase; Validated
Probab=96.10 E-value=0.012 Score=58.49 Aligned_cols=71 Identities=23% Similarity=0.260 Sum_probs=50.3
Q ss_pred CcEEEEEcc-chhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHhcCccc--cccc---cccc------CCCCccEEEEc
Q 010101 367 GKIFVLVGA-GGAGRALAFGAKSRGARVIIFNRNYERAKALADAVSGEAL--HFEY---LHEF------FPEKGMILANA 434 (518)
Q Consensus 367 ~k~vlvlGa-Gg~araia~~L~~~G~~v~i~nRt~~ka~~la~~~~~~~~--~~~~---l~~~------~~~~~divIna 434 (518)
+++++|.|+ ||.|++++..|.+.|++|+++.|+.++.+++... +...+ ++.+ +... .....|++||+
T Consensus 3 ~k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~l~~~~~~-~~~~~~~Dv~~~~~~~~~~~~~~~~~~~id~li~~ 81 (273)
T PRK06182 3 KKVALVTGASSGIGKATARRLAAQGYTVYGAARRVDKMEDLASL-GVHPLSLDVTDEASIKAAVDTIIAEEGRIDVLVNN 81 (273)
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhC-CCeEEEeeCCCHHHHHHHHHHHHHhcCCCCEEEEC
Confidence 678999997 7899999999999999999999999988776542 22111 1111 1110 12357999998
Q ss_pred CCCC
Q 010101 435 SAIG 438 (518)
Q Consensus 435 tp~g 438 (518)
...+
T Consensus 82 ag~~ 85 (273)
T PRK06182 82 AGYG 85 (273)
T ss_pred CCcC
Confidence 7654
No 259
>PRK12829 short chain dehydrogenase; Provisional
Probab=96.10 E-value=0.02 Score=56.29 Aligned_cols=48 Identities=29% Similarity=0.416 Sum_probs=42.2
Q ss_pred ccCCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHhc
Q 010101 364 PIAGKIFVLVGA-GGAGRALAFGAKSRGARVIIFNRNYERAKALADAVS 411 (518)
Q Consensus 364 ~l~~k~vlvlGa-Gg~araia~~L~~~G~~v~i~nRt~~ka~~la~~~~ 411 (518)
.+++++++|+|+ |+.|++++..|.+.|++|++++|+.+..+++.+.++
T Consensus 8 ~~~~~~vlItGa~g~iG~~~a~~L~~~g~~V~~~~r~~~~~~~~~~~~~ 56 (264)
T PRK12829 8 PLDGLRVLVTGGASGIGRAIAEAFAEAGARVHVCDVSEAALAATAARLP 56 (264)
T ss_pred ccCCCEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHh
Confidence 367899999998 679999999999999999999999988888776653
No 260
>COG0334 GdhA Glutamate dehydrogenase/leucine dehydrogenase [Amino acid transport and metabolism]
Probab=96.10 E-value=0.065 Score=56.08 Aligned_cols=135 Identities=19% Similarity=0.161 Sum_probs=88.2
Q ss_pred cccCCcEEEEEccchhHHHHHHHHHHCCCeEEEEeCCHH------------------HHHHHHHHhcCcccccccccccC
Q 010101 363 SPIAGKIFVLVGAGGAGRALAFGAKSRGARVIIFNRNYE------------------RAKALADAVSGEALHFEYLHEFF 424 (518)
Q Consensus 363 ~~l~~k~vlvlGaGg~araia~~L~~~G~~v~i~nRt~~------------------ka~~la~~~~~~~~~~~~l~~~~ 424 (518)
..++|++|.|-|.|-+|+-++..|.+.|++|+.++-+.. +.+.+++.++.+.++-+++-
T Consensus 203 ~~l~G~rVaVQG~GNVg~~aa~~l~~~GAkvva~sds~g~i~~~~Gld~~~l~~~~~~~~~v~~~~ga~~i~~~e~~--- 279 (411)
T COG0334 203 DDLEGARVAVQGFGNVGQYAAEKLHELGAKVVAVSDSKGGIYDEDGLDVEALLELKERRGSVAEYAGAEYITNEELL--- 279 (411)
T ss_pred CCcCCCEEEEECccHHHHHHHHHHHHcCCEEEEEEcCCCceecCCCCCHHHHHHHhhhhhhHHhhcCceEccccccc---
Confidence 348999999999999999999999999999888887666 55556666555544444432
Q ss_pred CCCccEEEEcCCCCCCCCCCCCCCChhhhcCCCEEEEEeeCCCchHHHHHHHHCCCeeeccHH---------HHHHHHHH
Q 010101 425 PEKGMILANASAIGMEPNSDQSPVPKEALKAYELVFDAVYTPRNTRLLREAAEVGATVVSGVE---------MFIRQALG 495 (518)
Q Consensus 425 ~~~~divInatp~g~~~~~~~~~~~~~~l~~~~~v~Di~Y~P~~T~ll~~A~~~G~~~i~G~~---------ml~~Qa~~ 495 (518)
..++||++-|.--+ .++.. ....|+. .+|..-.-+|....-.+.-.++|+-++++.- -|-++.-.
T Consensus 280 ~~~cDIl~PcA~~n---~I~~~--na~~l~a-k~V~EgAN~P~t~eA~~i~~erGIl~~PD~laNAGGV~vS~~E~~qn~ 353 (411)
T COG0334 280 EVDCDILIPCALEN---VITED--NADQLKA-KIVVEGANGPTTPEADEILLERGILVVPDILANAGGVIVSYLEWVQNA 353 (411)
T ss_pred cccCcEEccccccc---ccchh--hHHHhhh-cEEEeccCCCCCHHHHHHHHHCCCEEcChhhccCcCeeeehHHHHhhc
Confidence 24689998554322 11111 1123444 4888988888776666666788877666543 23334455
Q ss_pred HHHHhcCCCCC
Q 010101 496 QFRLFTGGLAP 506 (518)
Q Consensus 496 qf~lw~g~~~p 506 (518)
|-..|+-.++.
T Consensus 354 ~~~~wt~eev~ 364 (411)
T COG0334 354 QGLYWTEEEVD 364 (411)
T ss_pred ccCccCHHHHH
Confidence 56667755444
No 261
>KOG1014 consensus 17 beta-hydroxysteroid dehydrogenase type 3, HSD17B3 [Lipid transport and metabolism]
Probab=96.10 E-value=0.011 Score=59.54 Aligned_cols=45 Identities=33% Similarity=0.525 Sum_probs=41.2
Q ss_pred CcEEEEEccc-hhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHhc
Q 010101 367 GKIFVLVGAG-GAGRALAFGAKSRGARVIIFNRNYERAKALADAVS 411 (518)
Q Consensus 367 ~k~vlvlGaG-g~araia~~L~~~G~~v~i~nRt~~ka~~la~~~~ 411 (518)
|+=++|.||+ |.||+-+..|+++|.+|++++||++|.+++++++.
T Consensus 49 g~WAVVTGaTDGIGKayA~eLAkrG~nvvLIsRt~~KL~~v~kEI~ 94 (312)
T KOG1014|consen 49 GSWAVVTGATDGIGKAYARELAKRGFNVVLISRTQEKLEAVAKEIE 94 (312)
T ss_pred CCEEEEECCCCcchHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHH
Confidence 4668899985 89999999999999999999999999999998885
No 262
>PLN02780 ketoreductase/ oxidoreductase
Probab=96.09 E-value=0.012 Score=60.45 Aligned_cols=45 Identities=24% Similarity=0.559 Sum_probs=41.3
Q ss_pred CCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHh
Q 010101 366 AGKIFVLVGA-GGAGRALAFGAKSRGARVIIFNRNYERAKALADAV 410 (518)
Q Consensus 366 ~~k~vlvlGa-Gg~araia~~L~~~G~~v~i~nRt~~ka~~la~~~ 410 (518)
.|+.++|.|| ||.|++++..|++.|++|.+++|+.++.+++++++
T Consensus 52 ~g~~~lITGAs~GIG~alA~~La~~G~~Vil~~R~~~~l~~~~~~l 97 (320)
T PLN02780 52 YGSWALVTGPTDGIGKGFAFQLARKGLNLVLVARNPDKLKDVSDSI 97 (320)
T ss_pred cCCEEEEeCCCcHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHH
Confidence 5899999998 68999999999999999999999999999888765
No 263
>PRK12742 oxidoreductase; Provisional
Probab=96.08 E-value=0.021 Score=55.28 Aligned_cols=73 Identities=22% Similarity=0.236 Sum_probs=51.0
Q ss_pred cCCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEeC-CHHHHHHHHHHhcCccc--cccc---cccc--CCCCccEEEEcC
Q 010101 365 IAGKIFVLVGA-GGAGRALAFGAKSRGARVIIFNR-NYERAKALADAVSGEAL--HFEY---LHEF--FPEKGMILANAS 435 (518)
Q Consensus 365 l~~k~vlvlGa-Gg~araia~~L~~~G~~v~i~nR-t~~ka~~la~~~~~~~~--~~~~---l~~~--~~~~~divInat 435 (518)
+++|+++|.|+ ||.|++++..|.+.|++|.+..| +.++.+++.++++.... ++.+ +... .....|++||+.
T Consensus 4 ~~~k~vlItGasggIG~~~a~~l~~~G~~v~~~~~~~~~~~~~l~~~~~~~~~~~D~~~~~~~~~~~~~~~~id~li~~a 83 (237)
T PRK12742 4 FTGKKVLVLGGSRGIGAAIVRRFVTDGANVRFTYAGSKDAAERLAQETGATAVQTDSADRDAVIDVVRKSGALDILVVNA 83 (237)
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHHhCCeEEecCCCCHHHHHHHHHHhCCCcEEEECC
Confidence 56899999997 78999999999999998877654 67778888776654322 2211 1110 123479999987
Q ss_pred CC
Q 010101 436 AI 437 (518)
Q Consensus 436 p~ 437 (518)
..
T Consensus 84 g~ 85 (237)
T PRK12742 84 GI 85 (237)
T ss_pred CC
Confidence 54
No 264
>cd04726 KGPDC_HPS 3-Keto-L-gulonate 6-phosphate decarboxylase (KGPDC) and D-arabino-3-hexulose-6-phosphate synthase (HPS). KGPDC catalyzes the formation of L-xylulose 5-phosphate and carbon dioxide from 3-keto-L-gulonate 6-phosphate as part of the anaerobic pathway for L-ascorbate utilization in some eubacteria. HPS catalyzes the formation of D-arabino-3-hexulose-6-phosphate from D-ribulose 5-phosphate and formaldehyde in microorganisms that can use formaldehyde as a carbon source. Both catalyze reactions that involve the Mg2+-assisted formation and stabilization of 1,2-enediolate reaction intermediates.
Probab=96.07 E-value=0.2 Score=47.61 Aligned_cols=129 Identities=16% Similarity=0.154 Sum_probs=84.9
Q ss_pred ceEEEeecCCCHHHHHHHHHHHHhhCCCEEEEEeccCC-CCcHHHHHHHhcC-CCCcEEEEeecCCCCCCCCCCcHHHHH
Q 010101 9 LLVCTQLECETTEEMQASIEQAKVEGADLVELCIDSME-FSHISEVDKLIQH-PTLPAIVSYRLKSSRKSSDEACKNTCL 86 (518)
Q Consensus 9 ~~icv~l~~~~~~~~~~~~~~~~~~g~D~vElRlD~l~-~~~~~~l~~l~~~-~~~PiI~T~R~~~eGG~~~~~~~~~~~ 86 (518)
+.||+.|-..+.++...-++.... +++.+|+-+.+.. ... +.++.+++. .+.|++...-.. .. . .
T Consensus 1 ~~~~~a~d~~~~~~~~~~~~~l~~-~i~~ieig~~~~~~~g~-~~i~~i~~~~~~~~i~~~~~v~-------~~-~-~-- 67 (202)
T cd04726 1 PLLQVALDLLDLEEALELAKKVPD-GVDIIEAGTPLIKSEGM-EAVRALREAFPDKIIVADLKTA-------DA-G-A-- 67 (202)
T ss_pred CceEEEEcCCCHHHHHHHHHHhhh-cCCEEEcCCHHHHHhCH-HHHHHHHHHCCCCEEEEEEEec-------cc-c-H--
Confidence 468999999999999988777554 4999999666554 222 467778765 588998865432 11 1 1
Q ss_pred HHHHHHhhcCCcEEEEecCCCCchhhHHHh-hcCCCcEEEEeeecCCCCCCChhHHHHHHHHHHHcCCCEEEE
Q 010101 87 QVLRRALDLDVEFVEMDYEVASDPLMSEII-YSRSNTKIIVSSYLNGGGKPTTEKLGDVIACMQATGADVMKL 158 (518)
Q Consensus 87 ~ll~~~~~~g~~yvDiEl~~~~~~~~~l~~-~~~~~~kiI~S~H~f~~~tp~~~~l~~~~~~~~~~gadivKi 158 (518)
..++.+.+.|++++=+-.....+...++.+ .++.+.++++.-++. .|| ++.. + +...|+|++++
T Consensus 68 ~~~~~~~~aGad~i~~h~~~~~~~~~~~i~~~~~~g~~~~v~~~~~--~t~--~e~~---~-~~~~~~d~v~~ 132 (202)
T cd04726 68 LEAEMAFKAGADIVTVLGAAPLSTIKKAVKAAKKYGKEVQVDLIGV--EDP--EKRA---K-LLKLGVDIVIL 132 (202)
T ss_pred HHHHHHHhcCCCEEEEEeeCCHHHHHHHHHHHHHcCCeEEEEEeCC--CCH--HHHH---H-HHHCCCCEEEE
Confidence 234777889999988766554333344444 445678888865643 333 2332 2 56679999998
No 265
>PRK07478 short chain dehydrogenase; Provisional
Probab=96.07 E-value=0.015 Score=57.06 Aligned_cols=46 Identities=30% Similarity=0.468 Sum_probs=41.4
Q ss_pred cCCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHh
Q 010101 365 IAGKIFVLVGA-GGAGRALAFGAKSRGARVIIFNRNYERAKALADAV 410 (518)
Q Consensus 365 l~~k~vlvlGa-Gg~araia~~L~~~G~~v~i~nRt~~ka~~la~~~ 410 (518)
+++|+++|.|+ ||.|++++..|.+.|++|++++|+.++.+++.+++
T Consensus 4 ~~~k~~lItGas~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~ 50 (254)
T PRK07478 4 LNGKVAIITGASSGIGRAAAKLFAREGAKVVVGARRQAELDQLVAEI 50 (254)
T ss_pred CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHH
Confidence 56789999987 68999999999999999999999999988887765
No 266
>PLN02306 hydroxypyruvate reductase
Probab=96.05 E-value=0.015 Score=61.18 Aligned_cols=75 Identities=13% Similarity=0.149 Sum_probs=50.0
Q ss_pred cccCCcEEEEEccchhHHHHHHHHH-HCCCeEEEEeCCHHHH-HHHHHHhcC----------cccccccccccCCCCccE
Q 010101 363 SPIAGKIFVLVGAGGAGRALAFGAK-SRGARVIIFNRNYERA-KALADAVSG----------EALHFEYLHEFFPEKGMI 430 (518)
Q Consensus 363 ~~l~~k~vlvlGaGg~araia~~L~-~~G~~v~i~nRt~~ka-~~la~~~~~----------~~~~~~~l~~~~~~~~di 430 (518)
..+.|+++.|+|.|.+|++++..|. ..|++|..++|+.... +.....++. ......++++ .+.++|+
T Consensus 161 ~~L~gktvGIiG~G~IG~~vA~~l~~~fGm~V~~~d~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~L~e-ll~~sDi 239 (386)
T PLN02306 161 NLLKGQTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQSTRLEKFVTAYGQFLKANGEQPVTWKRASSMEE-VLREADV 239 (386)
T ss_pred cCCCCCEEEEECCCHHHHHHHHHHHhcCCCEEEEECCCCchhhhhhhhhhcccccccccccccccccCCHHH-HHhhCCE
Confidence 3578999999999999999999985 7899999999976421 111112221 0000123444 4567899
Q ss_pred EEEcCCCC
Q 010101 431 LANASAIG 438 (518)
Q Consensus 431 vInatp~g 438 (518)
|+.++|..
T Consensus 240 V~lh~Plt 247 (386)
T PLN02306 240 ISLHPVLD 247 (386)
T ss_pred EEEeCCCC
Confidence 98888763
No 267
>PRK05717 oxidoreductase; Validated
Probab=96.05 E-value=0.018 Score=56.62 Aligned_cols=49 Identities=24% Similarity=0.379 Sum_probs=43.4
Q ss_pred cccCCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHhc
Q 010101 363 SPIAGKIFVLVGA-GGAGRALAFGAKSRGARVIIFNRNYERAKALADAVS 411 (518)
Q Consensus 363 ~~l~~k~vlvlGa-Gg~araia~~L~~~G~~v~i~nRt~~ka~~la~~~~ 411 (518)
..+++|+++|.|+ |+.|++++..|.+.|++|.+++|+.++++++++.++
T Consensus 6 ~~~~~k~vlItG~sg~IG~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~ 55 (255)
T PRK05717 6 PGHNGRVALVTGAARGIGLGIAAWLIAEGWQVVLADLDRERGSKVAKALG 55 (255)
T ss_pred cccCCCEEEEeCCcchHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHcC
Confidence 4678999999997 789999999999999999999999988888777665
No 268
>PRK02006 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=96.02 E-value=0.037 Score=60.47 Aligned_cols=36 Identities=25% Similarity=0.443 Sum_probs=32.4
Q ss_pred cCCcEEEEEccchhHHHHHHHHHHCCCeEEEEeCCH
Q 010101 365 IAGKIFVLVGAGGAGRALAFGAKSRGARVIIFNRNY 400 (518)
Q Consensus 365 l~~k~vlvlGaGg~araia~~L~~~G~~v~i~nRt~ 400 (518)
+.+++++|+|.|++|++++..|.++|++|++++...
T Consensus 5 ~~~~~i~v~G~G~sG~s~a~~L~~~G~~v~~~D~~~ 40 (498)
T PRK02006 5 LQGPMVLVLGLGESGLAMARWCARHGARLRVADTRE 40 (498)
T ss_pred cCCCEEEEEeecHhHHHHHHHHHHCCCEEEEEcCCC
Confidence 457899999999999999999999999999999653
No 269
>PRK06949 short chain dehydrogenase; Provisional
Probab=96.01 E-value=0.019 Score=56.26 Aligned_cols=48 Identities=31% Similarity=0.494 Sum_probs=43.0
Q ss_pred cccCCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHh
Q 010101 363 SPIAGKIFVLVGA-GGAGRALAFGAKSRGARVIIFNRNYERAKALADAV 410 (518)
Q Consensus 363 ~~l~~k~vlvlGa-Gg~araia~~L~~~G~~v~i~nRt~~ka~~la~~~ 410 (518)
.++++++++|.|+ ||.|++++..|.+.|++|+++.|+.++++++.+.+
T Consensus 5 ~~~~~k~ilItGasg~IG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l 53 (258)
T PRK06949 5 INLEGKVALVTGASSGLGARFAQVLAQAGAKVVLASRRVERLKELRAEI 53 (258)
T ss_pred cCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHH
Confidence 4577899999997 78999999999999999999999999988887765
No 270
>cd08230 glucose_DH Glucose dehydrogenase. Glucose dehydrogenase (GlcDH), a member of the medium chain dehydrogenase/zinc-dependent alcohol dehydrogenase-like family, catalyzes the NADP(+)-dependent oxidation of glucose to gluconate, the first step in the Entner-Doudoroff pathway, an alternative to or substitute for glycolysis or the pentose phosphate pathway. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossman fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contai
Probab=96.00 E-value=0.024 Score=58.83 Aligned_cols=70 Identities=19% Similarity=0.242 Sum_probs=51.2
Q ss_pred CCcEEEEEccchhHHHHHHHHHHCCCeEEEEeC---CHHHHHHHHHHhcCccccccc--ccc-cCCCCccEEEEcCC
Q 010101 366 AGKIFVLVGAGGAGRALAFGAKSRGARVIIFNR---NYERAKALADAVSGEALHFEY--LHE-FFPEKGMILANASA 436 (518)
Q Consensus 366 ~~k~vlvlGaGg~araia~~L~~~G~~v~i~nR---t~~ka~~la~~~~~~~~~~~~--l~~-~~~~~~divInatp 436 (518)
.+++++|+|+|++|..++..++..|++|++++| +++|. +++++++...+...+ +.+ .....+|++|+++.
T Consensus 172 ~g~~vlI~G~G~vG~~a~q~ak~~G~~vi~~~~~~~~~~~~-~~~~~~Ga~~v~~~~~~~~~~~~~~~~d~vid~~g 247 (355)
T cd08230 172 NPRRALVLGAGPIGLLAALLLRLRGFEVYVLNRRDPPDPKA-DIVEELGATYVNSSKTPVAEVKLVGEFDLIIEATG 247 (355)
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCeEEEEecCCCCHHHH-HHHHHcCCEEecCCccchhhhhhcCCCCEEEECcC
Confidence 578999999999999999888899999999998 45554 477788865432221 100 01235899999986
No 271
>PRK07231 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=95.99 E-value=0.017 Score=56.29 Aligned_cols=47 Identities=34% Similarity=0.574 Sum_probs=41.5
Q ss_pred cCCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHhc
Q 010101 365 IAGKIFVLVGA-GGAGRALAFGAKSRGARVIIFNRNYERAKALADAVS 411 (518)
Q Consensus 365 l~~k~vlvlGa-Gg~araia~~L~~~G~~v~i~nRt~~ka~~la~~~~ 411 (518)
+++++++|+|+ |+.|++++..|.+.|++|+++.|+.++.+++...+.
T Consensus 3 ~~~~~vlItGasg~iG~~l~~~l~~~G~~V~~~~r~~~~~~~~~~~~~ 50 (251)
T PRK07231 3 LEGKVAIVTGASSGIGEGIARRFAAEGARVVVTDRNEEAAERVAAEIL 50 (251)
T ss_pred cCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHh
Confidence 46789999998 789999999999999999999999998888776654
No 272
>PRK09140 2-dehydro-3-deoxy-6-phosphogalactonate aldolase; Reviewed
Probab=95.98 E-value=0.24 Score=47.65 Aligned_cols=145 Identities=14% Similarity=0.093 Sum_probs=86.7
Q ss_pred eEEEeecCCCHHHHHHHHHHHHhhCCCEEEEEeccCCCCcHHHHHHHhcCCCCcEEEEeecCCCCCCCCCCcHHHHHHHH
Q 010101 10 LVCTQLECETTEEMQASIEQAKVEGADLVELCIDSMEFSHISEVDKLIQHPTLPAIVSYRLKSSRKSSDEACKNTCLQVL 89 (518)
Q Consensus 10 ~icv~l~~~~~~~~~~~~~~~~~~g~D~vElRlD~l~~~~~~~l~~l~~~~~~PiI~T~R~~~eGG~~~~~~~~~~~~ll 89 (518)
.++..+...+.+++...++.+...|+.++|+|.+.-. ..+.+..+++..+.++++=. |... + .+ -+
T Consensus 11 ~~~~v~r~~~~~~~~~~~~a~~~gGi~~iEvt~~~~~--~~~~i~~l~~~~~~~~~iGa-----GTV~--~--~~---~~ 76 (206)
T PRK09140 11 PLIAILRGITPDEALAHVGALIEAGFRAIEIPLNSPD--PFDSIAALVKALGDRALIGA-----GTVL--S--PE---QV 76 (206)
T ss_pred CEEEEEeCCCHHHHHHHHHHHHHCCCCEEEEeCCCcc--HHHHHHHHHHHcCCCcEEeE-----EecC--C--HH---HH
Confidence 4666789999999999999999999999999975432 23467777765554544322 1111 1 22 23
Q ss_pred HHHhhcCCcEEEEecCCCCchhhHHHh-hcCCCcEEEEeeecCCCCCCChhHHHHHHHHHHHcCCCEEEEEcccCCcccH
Q 010101 90 RRALDLDVEFVEMDYEVASDPLMSEII-YSRSNTKIIVSSYLNGGGKPTTEKLGDVIACMQATGADVMKLEIAVDSITDL 168 (518)
Q Consensus 90 ~~~~~~g~~yvDiEl~~~~~~~~~l~~-~~~~~~kiI~S~H~f~~~tp~~~~l~~~~~~~~~~gadivKia~~~~~~~D~ 168 (518)
+.+.+.|++++=.--.. ..+.+ .+..+.-++.+-|+. +| +.++.+.|+|++|+ .|.+.--.
T Consensus 77 ~~a~~aGA~fivsp~~~-----~~v~~~~~~~~~~~~~G~~t~-------~E----~~~A~~~Gad~vk~--Fpa~~~G~ 138 (206)
T PRK09140 77 DRLADAGGRLIVTPNTD-----PEVIRRAVALGMVVMPGVATP-------TE----AFAALRAGAQALKL--FPASQLGP 138 (206)
T ss_pred HHHHHcCCCEEECCCCC-----HHHHHHHHHCCCcEEcccCCH-------HH----HHHHHHcCCCEEEE--CCCCCCCH
Confidence 56778888886543221 12222 334677788886632 23 35566789999997 34332222
Q ss_pred HHHHHHhccC--CCCEEEEe
Q 010101 169 APVFEMLTHC--QVPLIALA 186 (518)
Q Consensus 169 ~~l~~~~~~~--~~p~i~~~ 186 (518)
..+-.+.... .+|+++++
T Consensus 139 ~~l~~l~~~~~~~ipvvaiG 158 (206)
T PRK09140 139 AGIKALRAVLPPDVPVFAVG 158 (206)
T ss_pred HHHHHHHhhcCCCCeEEEEC
Confidence 2222232222 36776654
No 273
>PRK09414 glutamate dehydrogenase; Provisional
Probab=95.97 E-value=0.11 Score=55.73 Aligned_cols=133 Identities=20% Similarity=0.198 Sum_probs=83.2
Q ss_pred CHHHHHHHHHHHHHhhccCCCCCCCCcccCCcEEEEEccchhHHHHHHHHHHCCCeEEEE-e----------CCHHHHHH
Q 010101 337 DCESAISAIEDALRERQGINGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGARVIIF-N----------RNYERAKA 405 (518)
Q Consensus 337 D~~G~~~~l~~~l~~~~~~~~~~~~~~~l~~k~vlvlGaGg~araia~~L~~~G~~v~i~-n----------Rt~~ka~~ 405 (518)
-+.|...+++..+... + .+++|+++.|.|.|.+|+.++..|.+.|++|+.+ + -+.+...+
T Consensus 211 Tg~Gv~~~~~~~~~~~-~--------~~l~g~rVaIqGfGnVG~~~A~~L~~~GakVVavsDs~G~iyn~~GLD~~~L~~ 281 (445)
T PRK09414 211 TGYGLVYFAEEMLKAR-G--------DSFEGKRVVVSGSGNVAIYAIEKAQQLGAKVVTCSDSSGYVYDEEGIDLEKLKE 281 (445)
T ss_pred ccHHHHHHHHHHHHhc-C--------CCcCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEEcCCceEECCCCCCHHHHHH
Confidence 3667777777655542 2 5688999999999999999999999999976655 5 35665544
Q ss_pred HHHHhc-----------CcccccccccccCCCCccEEEEcCCCCCCCCCCCCCCChhhhc--CCCEEEEEeeCCCchHHH
Q 010101 406 LADAVS-----------GEALHFEYLHEFFPEKGMILANASAIGMEPNSDQSPVPKEALK--AYELVFDAVYTPRNTRLL 472 (518)
Q Consensus 406 la~~~~-----------~~~~~~~~l~~~~~~~~divInatp~g~~~~~~~~~~~~~~l~--~~~~v~Di~Y~P~~T~ll 472 (518)
..+.-+ .+.++-+++ ...++||+|-|+.-+. ++... ...+. ...+|+.-.-+|- |+--
T Consensus 282 ~k~~~~~~l~~~~~~~~~~~i~~~~i---~~~d~DVliPaAl~n~---It~~~--a~~i~~~~akiIvEgAN~p~-t~~A 352 (445)
T PRK09414 282 IKEVRRGRISEYAEEFGAEYLEGGSP---WSVPCDIALPCATQNE---LDEED--AKTLIANGVKAVAEGANMPS-TPEA 352 (445)
T ss_pred HHHhcCCchhhhhhhcCCeecCCccc---cccCCcEEEecCCcCc---CCHHH--HHHHHHcCCeEEEcCCCCCC-CHHH
Confidence 433221 111111111 2246899998875432 12111 12242 4578999998887 5443
Q ss_pred H-HHHHCCCeeeccHH
Q 010101 473 R-EAAEVGATVVSGVE 487 (518)
Q Consensus 473 ~-~A~~~G~~~i~G~~ 487 (518)
. .-+++|+.+++..-
T Consensus 353 ~~~L~~rGI~~vPD~l 368 (445)
T PRK09414 353 IEVFLEAGVLFAPGKA 368 (445)
T ss_pred HHHHHHCCcEEECchh
Confidence 3 33668887776554
No 274
>PF01408 GFO_IDH_MocA: Oxidoreductase family, NAD-binding Rossmann fold; InterPro: IPR000683 This group of enzymes utilise NADP or NAD, and is known as the GFO/IDH/MOCA family in UniProtKB/Swiss-Prot. GFO is a glucose--fructose oxidoreductase, which converts D-glucose and D-fructose into D-gluconolactone and D-glucitol in the sorbitol-gluconate pathway. MOCA is a rhizopine catabolism protein which may catalyse the NADH-dependent dehydrogenase reaction involved in rhizopine catabolism. Other proteins belonging to this family include Gal80, a negative regulator for the expression of lactose and galactose metabolic genes; and several hypothetical proteins from yeast, Escherichia coli and Bacillus subtilis. The oxidoreductase, N-terminal domain is almost always associated with the oxidoreductase, C-terminal domain (see IPR004104 from INTERPRO).; GO: 0016491 oxidoreductase activity; PDB: 1LC0_A 1LC3_A 1GCU_A 3IP3_E 3CEA_C 3EVN_A 3NTQ_A 3NTR_B 3NT5_A 3MZ0_A ....
Probab=95.97 E-value=0.013 Score=50.67 Aligned_cols=106 Identities=24% Similarity=0.264 Sum_probs=71.3
Q ss_pred EEEEEccchhHHHHHHHHHHC--CCe-EEEEeCCHHHHHHHHHHhcCcc-cccccccccCCCCccEEEEcCCCCCCCCCC
Q 010101 369 IFVLVGAGGAGRALAFGAKSR--GAR-VIIFNRNYERAKALADAVSGEA-LHFEYLHEFFPEKGMILANASAIGMEPNSD 444 (518)
Q Consensus 369 ~vlvlGaGg~araia~~L~~~--G~~-v~i~nRt~~ka~~la~~~~~~~-~~~~~l~~~~~~~~divInatp~g~~~~~~ 444 (518)
++.|||+|..|+.-..++... +.+ +.|++++.++++++++.++... -+++++-+ ..+.|+|+.+||......
T Consensus 2 ~v~iiG~G~~g~~~~~~~~~~~~~~~v~~v~d~~~~~~~~~~~~~~~~~~~~~~~ll~--~~~~D~V~I~tp~~~h~~-- 77 (120)
T PF01408_consen 2 RVGIIGAGSIGRRHLRALLRSSPDFEVVAVCDPDPERAEAFAEKYGIPVYTDLEELLA--DEDVDAVIIATPPSSHAE-- 77 (120)
T ss_dssp EEEEESTSHHHHHHHHHHHHTTTTEEEEEEECSSHHHHHHHHHHTTSEEESSHHHHHH--HTTESEEEEESSGGGHHH--
T ss_pred EEEEECCcHHHHHHHHHHHhcCCCcEEEEEEeCCHHHHHHHHHHhcccchhHHHHHHH--hhcCCEEEEecCCcchHH--
Confidence 689999999999999888877 345 5699999999999999988652 23443322 136899999998653321
Q ss_pred CCCCChhhhcCC-CEEEEEeeCCC------chHHHHHHHHCCCeeec
Q 010101 445 QSPVPKEALKAY-ELVFDAVYTPR------NTRLLREAAEVGATVVS 484 (518)
Q Consensus 445 ~~~~~~~~l~~~-~~v~Di~Y~P~------~T~ll~~A~~~G~~~i~ 484 (518)
+-...+..+ .+++| +|. -..+++.+++.|..+.=
T Consensus 78 ---~~~~~l~~g~~v~~E---KP~~~~~~~~~~l~~~a~~~~~~~~V 118 (120)
T PF01408_consen 78 ---IAKKALEAGKHVLVE---KPLALTLEEAEELVEAAKEKGVKVMV 118 (120)
T ss_dssp ---HHHHHHHTTSEEEEE---SSSSSSHHHHHHHHHHHHHHTSCEEE
T ss_pred ---HHHHHHHcCCEEEEE---cCCcCCHHHHHHHHHHHHHhCCEEEE
Confidence 223344443 33433 444 25667777888877643
No 275
>KOG0725 consensus Reductases with broad range of substrate specificities [General function prediction only]
Probab=95.96 E-value=0.017 Score=57.88 Aligned_cols=49 Identities=33% Similarity=0.548 Sum_probs=43.7
Q ss_pred cccCCcEEEEEccc-hhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHhc
Q 010101 363 SPIAGKIFVLVGAG-GAGRALAFGAKSRGARVIIFNRNYERAKALADAVS 411 (518)
Q Consensus 363 ~~l~~k~vlvlGaG-g~araia~~L~~~G~~v~i~nRt~~ka~~la~~~~ 411 (518)
..+.+|.++|.|+. |.|+++|..|+++|++|+|+.|+.++.++.++.+.
T Consensus 4 ~~l~gkvalVTG~s~GIG~aia~~la~~Ga~v~i~~r~~~~~~~~~~~~~ 53 (270)
T KOG0725|consen 4 GRLAGKVALVTGGSSGIGKAIALLLAKAGAKVVITGRSEERLEETAQELG 53 (270)
T ss_pred ccCCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHH
Confidence 45789999999885 89999999999999999999999999888877653
No 276
>PRK09242 tropinone reductase; Provisional
Probab=95.96 E-value=0.018 Score=56.59 Aligned_cols=48 Identities=27% Similarity=0.362 Sum_probs=42.8
Q ss_pred cccCCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHh
Q 010101 363 SPIAGKIFVLVGA-GGAGRALAFGAKSRGARVIIFNRNYERAKALADAV 410 (518)
Q Consensus 363 ~~l~~k~vlvlGa-Gg~araia~~L~~~G~~v~i~nRt~~ka~~la~~~ 410 (518)
..+++|+++|.|+ ||.|++++..|.+.|++|++++|+.++++++.+++
T Consensus 5 ~~~~~k~~lItGa~~gIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~l 53 (257)
T PRK09242 5 WRLDGQTALITGASKGIGLAIAREFLGLGADVLIVARDADALAQARDEL 53 (257)
T ss_pred cccCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHH
Confidence 3567899999997 68999999999999999999999999988887665
No 277
>PLN02545 3-hydroxybutyryl-CoA dehydrogenase
Probab=95.95 E-value=0.015 Score=58.91 Aligned_cols=38 Identities=26% Similarity=0.312 Sum_probs=35.1
Q ss_pred cEEEEEccchhHHHHHHHHHHCCCeEEEEeCCHHHHHH
Q 010101 368 KIFVLVGAGGAGRALAFGAKSRGARVIIFNRNYERAKA 405 (518)
Q Consensus 368 k~vlvlGaGg~araia~~L~~~G~~v~i~nRt~~ka~~ 405 (518)
++|.|||+|-||.+++..|+..|++|++++++.++.+.
T Consensus 5 ~~V~vIG~G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~ 42 (295)
T PLN02545 5 KKVGVVGAGQMGSGIAQLAAAAGMDVWLLDSDPAALSR 42 (295)
T ss_pred CEEEEECCCHHHHHHHHHHHhcCCeEEEEeCCHHHHHH
Confidence 57999999999999999999999999999999988653
No 278
>PRK06124 gluconate 5-dehydrogenase; Provisional
Probab=95.95 E-value=0.02 Score=56.24 Aligned_cols=48 Identities=27% Similarity=0.411 Sum_probs=42.5
Q ss_pred cccCCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHh
Q 010101 363 SPIAGKIFVLVGA-GGAGRALAFGAKSRGARVIIFNRNYERAKALADAV 410 (518)
Q Consensus 363 ~~l~~k~vlvlGa-Gg~araia~~L~~~G~~v~i~nRt~~ka~~la~~~ 410 (518)
..+++|+++|.|+ |+.|++++..|.+.|++|++++|+.++.+++++++
T Consensus 7 ~~~~~k~ilItGas~~IG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~ 55 (256)
T PRK06124 7 FSLAGQVALVTGSARGLGFEIARALAGAGAHVLVNGRNAATLEAAVAAL 55 (256)
T ss_pred cCCCCCEEEEECCCchHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHH
Confidence 4578999999998 67999999999999999999999998888777655
No 279
>PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B ....
Probab=95.95 E-value=0.0068 Score=56.36 Aligned_cols=65 Identities=23% Similarity=0.187 Sum_probs=48.4
Q ss_pred EEEEcc-chhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHhcCcc--ccccc---ccccCCCCccEEEEcCCCC
Q 010101 370 FVLVGA-GGAGRALAFGAKSRGARVIIFNRNYERAKALADAVSGEA--LHFEY---LHEFFPEKGMILANASAIG 438 (518)
Q Consensus 370 vlvlGa-Gg~araia~~L~~~G~~v~i~nRt~~ka~~la~~~~~~~--~~~~~---l~~~~~~~~divInatp~g 438 (518)
|+|+|+ |.+|+.++..|.+.|++|+.+.|+++++++ ..+.+. .++.+ +.. .+.++|.||++.+.+
T Consensus 1 I~V~GatG~vG~~l~~~L~~~~~~V~~~~R~~~~~~~---~~~~~~~~~d~~d~~~~~~-al~~~d~vi~~~~~~ 71 (183)
T PF13460_consen 1 ILVFGATGFVGRALAKQLLRRGHEVTALVRSPSKAED---SPGVEIIQGDLFDPDSVKA-ALKGADAVIHAAGPP 71 (183)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTSEEEEEESSGGGHHH---CTTEEEEESCTTCHHHHHH-HHTTSSEEEECCHST
T ss_pred eEEECCCChHHHHHHHHHHHCCCEEEEEecCchhccc---ccccccceeeehhhhhhhh-hhhhcchhhhhhhhh
Confidence 689997 889999999999999999999999998877 222222 12222 222 356789999988543
No 280
>cd05313 NAD_bind_2_Glu_DH NAD(P) binding domain of glutamate dehydrogenase, subgroup 2. Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NADP+. Glutamate DH is a multidomain enzyme that catalyzes the reaction from glutamate to 2-oxyoglutarate and ammonia in the presence of NAD or NADP. It is present in all organisms. Enzymes involved in ammonia asimilation are typically NADP+-dependent, while those involved in glutamate catabolism are generally NAD+-dependent. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids t
Probab=95.95 E-value=0.055 Score=53.59 Aligned_cols=130 Identities=16% Similarity=0.199 Sum_probs=80.3
Q ss_pred HHHHHHHHHHHHHhhccCCCCCCCCcccCCcEEEEEccchhHHHHHHHHHHCCCeEE-EEeC----------CHHHHHHH
Q 010101 338 CESAISAIEDALRERQGINGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGARVI-IFNR----------NYERAKAL 406 (518)
Q Consensus 338 ~~G~~~~l~~~l~~~~~~~~~~~~~~~l~~k~vlvlGaGg~araia~~L~~~G~~v~-i~nR----------t~~ka~~l 406 (518)
+.|...+++..+... + .+++|++++|-|.|.+|+.++..|.+.|++|+ |.+. +.+..+.+
T Consensus 18 g~Gv~~~~~~~~~~~-~--------~~l~g~~vaIqGfGnVG~~~a~~L~e~GakvvaVsD~~G~i~~~~Gld~~~l~~l 88 (254)
T cd05313 18 GYGLVYFVEEMLKDR-N--------ETLKGKRVAISGSGNVAQYAAEKLLELGAKVVTLSDSKGYVYDPDGFTGEKLAEL 88 (254)
T ss_pred HHHHHHHHHHHHHhc-C--------CCcCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEECCCceEECCCCCCHHHHHHH
Confidence 678888877766543 2 57889999999999999999999999999766 6652 23333332
Q ss_pred HHHh---c------------CcccccccccccCCCCccEEEEcCCCCCCCCCCCCCCChh---hhc--CCCEEEEEeeCC
Q 010101 407 ADAV---S------------GEALHFEYLHEFFPEKGMILANASAIGMEPNSDQSPVPKE---ALK--AYELVFDAVYTP 466 (518)
Q Consensus 407 a~~~---~------------~~~~~~~~l~~~~~~~~divInatp~g~~~~~~~~~~~~~---~l~--~~~~v~Di~Y~P 466 (518)
.+.- + .+.++-+++ ....+||+|-|.--+ . +..+ .+. +..+|+.-.-+|
T Consensus 89 ~~~~~~~~~~v~~~~~~~~~a~~~~~~~~---~~~~~DIliPcAl~~---~-----I~~~na~~i~~~~ak~I~EgAN~p 157 (254)
T cd05313 89 KEIKEVRRGRVSEYAKKYGTAKYFEGKKP---WEVPCDIAFPCATQN---E-----VDAEDAKLLVKNGCKYVAEGANMP 157 (254)
T ss_pred HHHHHhcCCcHHHHhhcCCCCEEeCCcch---hcCCCcEEEeccccc---c-----CCHHHHHHHHHcCCEEEEeCCCCC
Confidence 2111 1 111111121 224689998664322 1 3332 343 457899999888
Q ss_pred CchHHHHHHHHCCCeeeccHH
Q 010101 467 RNTRLLREAAEVGATVVSGVE 487 (518)
Q Consensus 467 ~~T~ll~~A~~~G~~~i~G~~ 487 (518)
-...--+.-+++|+.+++..-
T Consensus 158 ~t~~a~~~L~~rGI~vvPD~l 178 (254)
T cd05313 158 CTAEAIEVFRQAGVLFAPGKA 178 (254)
T ss_pred CCHHHHHHHHHCCcEEECchh
Confidence 633333334678888776543
No 281
>PRK07889 enoyl-(acyl carrier protein) reductase; Provisional
Probab=95.95 E-value=0.021 Score=56.46 Aligned_cols=74 Identities=16% Similarity=0.191 Sum_probs=51.3
Q ss_pred cCCcEEEEEcc---chhHHHHHHHHHHCCCeEEEEeCCH--HHHHHHHHHhcCcc--c--cccc---cccc------CCC
Q 010101 365 IAGKIFVLVGA---GGAGRALAFGAKSRGARVIIFNRNY--ERAKALADAVSGEA--L--HFEY---LHEF------FPE 426 (518)
Q Consensus 365 l~~k~vlvlGa---Gg~araia~~L~~~G~~v~i~nRt~--~ka~~la~~~~~~~--~--~~~~---l~~~------~~~ 426 (518)
+++|+++|.|+ +|.|++++..|++.|++|++++|+. +..++++++++... + ++.+ +... ...
T Consensus 5 ~~~k~~lItGa~~s~GIG~a~a~~la~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g 84 (256)
T PRK07889 5 LEGKRILVTGVITDSSIAFHVARVAQEQGAEVVLTGFGRALRLTERIAKRLPEPAPVLELDVTNEEHLASLADRVREHVD 84 (256)
T ss_pred ccCCEEEEeCCCCcchHHHHHHHHHHHCCCEEEEecCccchhHHHHHHHhcCCCCcEEeCCCCCHHHHHHHHHHHHHHcC
Confidence 56899999996 7999999999999999999998763 55677777664321 1 1111 1100 124
Q ss_pred CccEEEEcCCCC
Q 010101 427 KGMILANASAIG 438 (518)
Q Consensus 427 ~~divInatp~g 438 (518)
..|++||+....
T Consensus 85 ~iD~li~nAG~~ 96 (256)
T PRK07889 85 GLDGVVHSIGFA 96 (256)
T ss_pred CCcEEEEccccc
Confidence 579999987543
No 282
>PRK08277 D-mannonate oxidoreductase; Provisional
Probab=95.94 E-value=0.02 Score=57.03 Aligned_cols=47 Identities=36% Similarity=0.581 Sum_probs=42.4
Q ss_pred ccCCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHh
Q 010101 364 PIAGKIFVLVGA-GGAGRALAFGAKSRGARVIIFNRNYERAKALADAV 410 (518)
Q Consensus 364 ~l~~k~vlvlGa-Gg~araia~~L~~~G~~v~i~nRt~~ka~~la~~~ 410 (518)
.+++|+++|.|+ ||.|++++..|.+.|++|.+++|+.++++++++++
T Consensus 7 ~~~~k~vlVtGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~ 54 (278)
T PRK08277 7 SLKGKVAVITGGGGVLGGAMAKELARAGAKVAILDRNQEKAEAVVAEI 54 (278)
T ss_pred ccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHH
Confidence 567899999998 78999999999999999999999999888887765
No 283
>PRK02705 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=95.94 E-value=0.048 Score=58.81 Aligned_cols=32 Identities=34% Similarity=0.414 Sum_probs=29.7
Q ss_pred EEEEEccchhHHHHHHHHHHCCCeEEEEeCCH
Q 010101 369 IFVLVGAGGAGRALAFGAKSRGARVIIFNRNY 400 (518)
Q Consensus 369 ~vlvlGaGg~araia~~L~~~G~~v~i~nRt~ 400 (518)
+++|+|.|++|++++..|.+.|++|+++++..
T Consensus 2 ~v~viG~G~sG~s~a~~l~~~G~~V~~~D~~~ 33 (459)
T PRK02705 2 IAHVIGLGRSGIAAARLLKAQGWEVVVSDRND 33 (459)
T ss_pred eEEEEccCHHHHHHHHHHHHCCCEEEEECCCC
Confidence 68999999999999999999999999999764
No 284
>PRK09186 flagellin modification protein A; Provisional
Probab=95.93 E-value=0.018 Score=56.42 Aligned_cols=45 Identities=29% Similarity=0.383 Sum_probs=40.7
Q ss_pred CCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHh
Q 010101 366 AGKIFVLVGA-GGAGRALAFGAKSRGARVIIFNRNYERAKALADAV 410 (518)
Q Consensus 366 ~~k~vlvlGa-Gg~araia~~L~~~G~~v~i~nRt~~ka~~la~~~ 410 (518)
++|+++|.|+ ||.|++++..|.+.|++|.+++|+.++++++++++
T Consensus 3 ~~k~vlItGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l 48 (256)
T PRK09186 3 KGKTILITGAGGLIGSALVKAILEAGGIVIAADIDKEALNELLESL 48 (256)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecChHHHHHHHHHH
Confidence 5789999998 68999999999999999999999999988887665
No 285
>PRK06180 short chain dehydrogenase; Provisional
Probab=95.93 E-value=0.03 Score=55.86 Aligned_cols=72 Identities=25% Similarity=0.264 Sum_probs=51.5
Q ss_pred CcEEEEEcc-chhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHhcCcc----ccccc---cccc------CCCCccEEE
Q 010101 367 GKIFVLVGA-GGAGRALAFGAKSRGARVIIFNRNYERAKALADAVSGEA----LHFEY---LHEF------FPEKGMILA 432 (518)
Q Consensus 367 ~k~vlvlGa-Gg~araia~~L~~~G~~v~i~nRt~~ka~~la~~~~~~~----~~~~~---l~~~------~~~~~divI 432 (518)
+++++|.|+ ||.|++++..|.+.|++|+++.|+.++.+.+.+..+... .++.+ +... .....|+||
T Consensus 4 ~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~l~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~~~~d~vv 83 (277)
T PRK06180 4 MKTWLITGVSSGFGRALAQAALAAGHRVVGTVRSEAARADFEALHPDRALARLLDVTDFDAIDAVVADAEATFGPIDVLV 83 (277)
T ss_pred CCEEEEecCCChHHHHHHHHHHhCcCEEEEEeCCHHHHHHHHhhcCCCeeEEEccCCCHHHHHHHHHHHHHHhCCCCEEE
Confidence 578999988 789999999999999999999999998888776543221 11211 1100 123579999
Q ss_pred EcCCCC
Q 010101 433 NASAIG 438 (518)
Q Consensus 433 natp~g 438 (518)
|+....
T Consensus 84 ~~ag~~ 89 (277)
T PRK06180 84 NNAGYG 89 (277)
T ss_pred ECCCcc
Confidence 987654
No 286
>cd01483 E1_enzyme_family Superfamily of activating enzymes (E1) of the ubiquitin-like proteins. This family includes classical ubiquitin-activating enzymes E1, ubiquitin-like (ubl) activating enzymes and other mechanistic homologes, like MoeB, Thif1 and others. The common reaction mechanism catalyzed by MoeB, ThiF and the E1 enzymes begins with a nucleophilic attack of the C-terminal carboxylate of MoaD, ThiS and ubiquitin, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS.
Probab=95.93 E-value=0.022 Score=51.13 Aligned_cols=38 Identities=24% Similarity=0.461 Sum_probs=32.1
Q ss_pred EEEEEccchhHHHHHHHHHHCCC-eEEEEeCCHHHHHHH
Q 010101 369 IFVLVGAGGAGRALAFGAKSRGA-RVIIFNRNYERAKAL 406 (518)
Q Consensus 369 ~vlvlGaGg~araia~~L~~~G~-~v~i~nRt~~ka~~l 406 (518)
+++|+|+||.|..++..|...|+ ++++++.+.-....+
T Consensus 1 ~VliiG~GglGs~ia~~L~~~Gv~~i~ivD~d~v~~~nl 39 (143)
T cd01483 1 RVLLVGLGGLGSEIALNLARSGVGKITLIDFDTVELSNL 39 (143)
T ss_pred CEEEECCCHHHHHHHHHHHHCCCCEEEEEcCCCcCcchh
Confidence 48999999999999999999999 999998774433333
No 287
>PRK08703 short chain dehydrogenase; Provisional
Probab=95.92 E-value=0.019 Score=55.78 Aligned_cols=47 Identities=28% Similarity=0.477 Sum_probs=41.8
Q ss_pred ccCCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHh
Q 010101 364 PIAGKIFVLVGA-GGAGRALAFGAKSRGARVIIFNRNYERAKALADAV 410 (518)
Q Consensus 364 ~l~~k~vlvlGa-Gg~araia~~L~~~G~~v~i~nRt~~ka~~la~~~ 410 (518)
.+++++++|+|+ ||.|++++..|.+.|++|.+++|+.++++++.+++
T Consensus 3 ~l~~k~vlItG~sggiG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l 50 (239)
T PRK08703 3 TLSDKTILVTGASQGLGEQVAKAYAAAGATVILVARHQKKLEKVYDAI 50 (239)
T ss_pred CCCCCEEEEECCCCcHHHHHHHHHHHcCCEEEEEeCChHHHHHHHHHH
Confidence 367899999987 78999999999999999999999999888877665
No 288
>cd01492 Aos1_SUMO Ubiquitin activating enzyme (E1) subunit Aos1. Aos1 is part of the heterodimeric activating enzyme (E1), specific for the SUMO family of ubiquitin-like proteins (Ubls). E1 enzymes are part of a conjugation cascade to attach Ub or Ubls, covalently to substrate proteins consisting of activating (E1), conjugating (E2), and/or ligating (E3) enzymes. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and Ubls C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Post-translational modification by SUMO family of ubiquitin-like proteins (Ublps) is involved in cell division, nuclear transport, the stress response and signal transduction. Aos1 contains part of the adenylation domain.
Probab=95.91 E-value=0.014 Score=55.66 Aligned_cols=35 Identities=20% Similarity=0.358 Sum_probs=32.0
Q ss_pred cCCcEEEEEccchhHHHHHHHHHHCCC-eEEEEeCC
Q 010101 365 IAGKIFVLVGAGGAGRALAFGAKSRGA-RVIIFNRN 399 (518)
Q Consensus 365 l~~k~vlvlGaGg~araia~~L~~~G~-~v~i~nRt 399 (518)
+++++|+|+|+||.|..++..|+..|+ +|++++.+
T Consensus 19 L~~s~VlIiG~gglG~evak~La~~GVg~i~lvD~d 54 (197)
T cd01492 19 LRSARILLIGLKGLGAEIAKNLVLSGIGSLTILDDR 54 (197)
T ss_pred HHhCcEEEEcCCHHHHHHHHHHHHcCCCEEEEEECC
Confidence 567899999999999999999999999 99999754
No 289
>PRK07062 short chain dehydrogenase; Provisional
Probab=95.90 E-value=0.019 Score=56.70 Aligned_cols=47 Identities=28% Similarity=0.367 Sum_probs=41.4
Q ss_pred ccCCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHh
Q 010101 364 PIAGKIFVLVGA-GGAGRALAFGAKSRGARVIIFNRNYERAKALADAV 410 (518)
Q Consensus 364 ~l~~k~vlvlGa-Gg~araia~~L~~~G~~v~i~nRt~~ka~~la~~~ 410 (518)
++++|.++|.|+ ||.|++++..|.+.|++|++++|+.++.+++.+++
T Consensus 5 ~l~~k~~lItGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~ 52 (265)
T PRK07062 5 QLEGRVAVVTGGSSGIGLATVELLLEAGASVAICGRDEERLASAEARL 52 (265)
T ss_pred ccCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHH
Confidence 467899999998 68999999999999999999999998887776554
No 290
>PRK07774 short chain dehydrogenase; Provisional
Probab=95.88 E-value=0.021 Score=55.66 Aligned_cols=46 Identities=33% Similarity=0.507 Sum_probs=40.6
Q ss_pred cCCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHh
Q 010101 365 IAGKIFVLVGA-GGAGRALAFGAKSRGARVIIFNRNYERAKALADAV 410 (518)
Q Consensus 365 l~~k~vlvlGa-Gg~araia~~L~~~G~~v~i~nRt~~ka~~la~~~ 410 (518)
+++++++|.|+ |++|++++.+|.+.|++|++++|+.++.+.+.+.+
T Consensus 4 ~~~k~vlItGasg~iG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~ 50 (250)
T PRK07774 4 FDDKVAIVTGAAGGIGQAYAEALAREGASVVVADINAEGAERVAKQI 50 (250)
T ss_pred cCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHH
Confidence 56789999998 89999999999999999999999988777776654
No 291
>PRK06125 short chain dehydrogenase; Provisional
Probab=95.85 E-value=0.022 Score=56.16 Aligned_cols=47 Identities=30% Similarity=0.438 Sum_probs=41.6
Q ss_pred ccCCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHh
Q 010101 364 PIAGKIFVLVGA-GGAGRALAFGAKSRGARVIIFNRNYERAKALADAV 410 (518)
Q Consensus 364 ~l~~k~vlvlGa-Gg~araia~~L~~~G~~v~i~nRt~~ka~~la~~~ 410 (518)
.+++|+++|.|+ ||.|++++..|.+.|++|.+++|+.++++++.+++
T Consensus 4 ~~~~k~vlItG~~~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l 51 (259)
T PRK06125 4 HLAGKRVLITGASKGIGAAAAEAFAAEGCHLHLVARDADALEALAADL 51 (259)
T ss_pred CCCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHH
Confidence 356899999998 68999999999999999999999999888876655
No 292
>PRK07890 short chain dehydrogenase; Provisional
Probab=95.83 E-value=0.021 Score=56.01 Aligned_cols=47 Identities=36% Similarity=0.584 Sum_probs=41.4
Q ss_pred cCCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHhc
Q 010101 365 IAGKIFVLVGA-GGAGRALAFGAKSRGARVIIFNRNYERAKALADAVS 411 (518)
Q Consensus 365 l~~k~vlvlGa-Gg~araia~~L~~~G~~v~i~nRt~~ka~~la~~~~ 411 (518)
+++|+++|.|+ ||.|++++..|.+.|++|.+++|+.++.+++.+++.
T Consensus 3 l~~k~vlItGa~~~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~ 50 (258)
T PRK07890 3 LKGKVVVVSGVGPGLGRTLAVRAARAGADVVLAARTAERLDEVAAEID 50 (258)
T ss_pred cCCCEEEEECCCCcHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHH
Confidence 35789999997 689999999999999999999999998888877653
No 293
>PRK06172 short chain dehydrogenase; Provisional
Probab=95.83 E-value=0.022 Score=55.80 Aligned_cols=47 Identities=26% Similarity=0.509 Sum_probs=40.9
Q ss_pred ccCCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHh
Q 010101 364 PIAGKIFVLVGA-GGAGRALAFGAKSRGARVIIFNRNYERAKALADAV 410 (518)
Q Consensus 364 ~l~~k~vlvlGa-Gg~araia~~L~~~G~~v~i~nRt~~ka~~la~~~ 410 (518)
.+++|+++|.|+ ||.|++++..|.+.|++|.+++|+.++.+++.+.+
T Consensus 4 ~l~~k~ilItGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~ 51 (253)
T PRK06172 4 TFSGKVALVTGGAAGIGRATALAFAREGAKVVVADRDAAGGEETVALI 51 (253)
T ss_pred CCCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHH
Confidence 356899999998 68999999999999999999999998877766554
No 294
>PRK06603 enoyl-(acyl carrier protein) reductase; Provisional
Probab=95.83 E-value=0.033 Score=55.13 Aligned_cols=48 Identities=27% Similarity=0.332 Sum_probs=37.6
Q ss_pred ccCCcEEEEEccc---hhHHHHHHHHHHCCCeEEEEeCCH---HHHHHHHHHhc
Q 010101 364 PIAGKIFVLVGAG---GAGRALAFGAKSRGARVIIFNRNY---ERAKALADAVS 411 (518)
Q Consensus 364 ~l~~k~vlvlGaG---g~araia~~L~~~G~~v~i~nRt~---~ka~~la~~~~ 411 (518)
.+++|.++|.|++ |.|++++..|++.|++|++..|+. +.++++++.++
T Consensus 5 ~~~~k~~lITGas~~~GIG~a~a~~la~~G~~v~~~~r~~~~~~~~~~l~~~~g 58 (260)
T PRK06603 5 LLQGKKGLITGIANNMSISWAIAQLAKKHGAELWFTYQSEVLEKRVKPLAEEIG 58 (260)
T ss_pred ccCCcEEEEECCCCCcchHHHHHHHHHHcCCEEEEEeCchHHHHHHHHHHHhcC
Confidence 3568999999996 799999999999999999999884 23444544433
No 295
>PRK09880 L-idonate 5-dehydrogenase; Provisional
Probab=95.82 E-value=0.031 Score=57.71 Aligned_cols=92 Identities=14% Similarity=0.099 Sum_probs=60.3
Q ss_pred CCcEEEEEccchhHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHHhcCcc-cccc-----cccccCCCCccEEEEcCCCC
Q 010101 366 AGKIFVLVGAGGAGRALAFGAKSRGA-RVIIFNRNYERAKALADAVSGEA-LHFE-----YLHEFFPEKGMILANASAIG 438 (518)
Q Consensus 366 ~~k~vlvlGaGg~araia~~L~~~G~-~v~i~nRt~~ka~~la~~~~~~~-~~~~-----~l~~~~~~~~divInatp~g 438 (518)
.+++++|+|+|++|.+++..+..+|+ +|++++|++++. ++++++|... +... ++.. ....+|++|+++...
T Consensus 169 ~g~~VlV~G~G~vG~~aiqlak~~G~~~Vi~~~~~~~~~-~~a~~lGa~~vi~~~~~~~~~~~~-~~g~~D~vid~~G~~ 246 (343)
T PRK09880 169 QGKRVFVSGVGPIGCLIVAAVKTLGAAEIVCADVSPRSL-SLAREMGADKLVNPQNDDLDHYKA-EKGYFDVSFEVSGHP 246 (343)
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEeCCHHHH-HHHHHcCCcEEecCCcccHHHHhc-cCCCCCEEEECCCCH
Confidence 57899999999999999988888999 799999998886 4667788643 2221 1111 112479999998531
Q ss_pred CCCCCCCCCCChhhhcCCCEEEEEee
Q 010101 439 MEPNSDQSPVPKEALKAYELVFDAVY 464 (518)
Q Consensus 439 ~~~~~~~~~~~~~~l~~~~~v~Di~Y 464 (518)
. . .......++++..++.+-.
T Consensus 247 ~--~---~~~~~~~l~~~G~iv~~G~ 267 (343)
T PRK09880 247 S--S---INTCLEVTRAKGVMVQVGM 267 (343)
T ss_pred H--H---HHHHHHHhhcCCEEEEEcc
Confidence 0 0 0011234566666665543
No 296
>PRK08589 short chain dehydrogenase; Validated
Probab=95.81 E-value=0.022 Score=56.69 Aligned_cols=45 Identities=29% Similarity=0.445 Sum_probs=39.9
Q ss_pred cCCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHh
Q 010101 365 IAGKIFVLVGA-GGAGRALAFGAKSRGARVIIFNRNYERAKALADAV 410 (518)
Q Consensus 365 l~~k~vlvlGa-Gg~araia~~L~~~G~~v~i~nRt~~ka~~la~~~ 410 (518)
+++|+++|.|+ ||.|++++..|.+.|++|++++|+ ++++++++++
T Consensus 4 l~~k~vlItGas~gIG~aia~~l~~~G~~vi~~~r~-~~~~~~~~~~ 49 (272)
T PRK08589 4 LENKVAVITGASTGIGQASAIALAQEGAYVLAVDIA-EAVSETVDKI 49 (272)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCc-HHHHHHHHHH
Confidence 56899999998 789999999999999999999999 7777776665
No 297
>PRK09291 short chain dehydrogenase; Provisional
Probab=95.80 E-value=0.028 Score=55.07 Aligned_cols=71 Identities=23% Similarity=0.239 Sum_probs=49.7
Q ss_pred CcEEEEEcc-chhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHhcC---c--c--ccccc---ccccCCCCccEEEEcC
Q 010101 367 GKIFVLVGA-GGAGRALAFGAKSRGARVIIFNRNYERAKALADAVSG---E--A--LHFEY---LHEFFPEKGMILANAS 435 (518)
Q Consensus 367 ~k~vlvlGa-Gg~araia~~L~~~G~~v~i~nRt~~ka~~la~~~~~---~--~--~~~~~---l~~~~~~~~divInat 435 (518)
+++++|.|+ ||.|++++..|.+.|++|+++.|+.++++++.+.... . . .++.+ +........|+|||+.
T Consensus 2 ~~~vlVtGasg~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~id~vi~~a 81 (257)
T PRK09291 2 SKTILITGAGSGFGREVALRLARKGHNVIAGVQIAPQVTALRAEAARRGLALRVEKLDLTDAIDRAQAAEWDVDVLLNNA 81 (257)
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcceEEEeeCCCHHHHHHHhcCCCCEEEECC
Confidence 468999998 7899999999999999999999998887777654321 1 1 12211 1111112689999987
Q ss_pred CC
Q 010101 436 AI 437 (518)
Q Consensus 436 p~ 437 (518)
..
T Consensus 82 g~ 83 (257)
T PRK09291 82 GI 83 (257)
T ss_pred Cc
Confidence 54
No 298
>PRK03803 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=95.79 E-value=0.05 Score=58.53 Aligned_cols=34 Identities=15% Similarity=0.283 Sum_probs=30.7
Q ss_pred CcEEEEEccchhHHHHHHHHHHCCCeEEEEeCCH
Q 010101 367 GKIFVLVGAGGAGRALAFGAKSRGARVIIFNRNY 400 (518)
Q Consensus 367 ~k~vlvlGaGg~araia~~L~~~G~~v~i~nRt~ 400 (518)
+..++|+|.||+|++++..|.++|++|++.++..
T Consensus 6 ~~~~~v~G~G~sG~s~a~~L~~~G~~v~~~D~~~ 39 (448)
T PRK03803 6 DGLHIVVGLGKTGLSVVRFLARQGIPFAVMDSRE 39 (448)
T ss_pred CCeEEEEeecHhHHHHHHHHHhCCCeEEEEeCCC
Confidence 3579999999999999999999999999999754
No 299
>PTZ00079 NADP-specific glutamate dehydrogenase; Provisional
Probab=95.79 E-value=0.24 Score=52.89 Aligned_cols=129 Identities=16% Similarity=0.180 Sum_probs=78.7
Q ss_pred CHHHHHHHHHHHHHhhccCCCCCCCCcccCCcEEEEEccchhHHHHHHHHHHCCCeEE-EEeCC----------HHHHHH
Q 010101 337 DCESAISAIEDALRERQGINGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGARVI-IFNRN----------YERAKA 405 (518)
Q Consensus 337 D~~G~~~~l~~~l~~~~~~~~~~~~~~~l~~k~vlvlGaGg~araia~~L~~~G~~v~-i~nRt----------~~ka~~ 405 (518)
-+.|.+.+++..+... + .+++|++|+|-|.|.+|..++..|.++|++|+ |.+.+ .++...
T Consensus 216 TG~Gv~~~~~~~l~~~-~--------~~l~Gk~VaVqG~GnVg~~aa~~L~e~GakVVavSD~~G~iy~~~Gld~~~l~~ 286 (454)
T PTZ00079 216 TGYGLVYFVLEVLKKL-N--------DSLEGKTVVVSGSGNVAQYAVEKLLQLGAKVLTMSDSDGYIHEPNGFTKEKLAY 286 (454)
T ss_pred cHHHHHHHHHHHHHHc-C--------CCcCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEEcCCCcEECCCCCCHHHHHH
Confidence 4778888777766543 2 56899999999999999999999999999766 87776 666544
Q ss_pred HHHHhc---------------CcccccccccccCCCCccEEEEcCCCCCCCCCCCCCCChhh---h--cCCCEEEEEeeC
Q 010101 406 LADAVS---------------GEALHFEYLHEFFPEKGMILANASAIGMEPNSDQSPVPKEA---L--KAYELVFDAVYT 465 (518)
Q Consensus 406 la~~~~---------------~~~~~~~~l~~~~~~~~divInatp~g~~~~~~~~~~~~~~---l--~~~~~v~Di~Y~ 465 (518)
+.+.-. .+.++-+++ ....+||++-|.- .. .+..+. + ....+|..-.-.
T Consensus 287 l~~~k~~~~g~i~~~~~~~~~a~~~~~~~~---~~~~cDI~iPcA~---~n-----~I~~~~a~~l~~~~ak~V~EgAN~ 355 (454)
T PTZ00079 287 LMDLKNVKRGRLKEYAKHSSTAKYVPGKKP---WEVPCDIAFPCAT---QN-----EINLEDAKLLIKNGCKLVAEGANM 355 (454)
T ss_pred HHHHHhhcCCcHHhhhhccCCcEEeCCcCc---ccCCccEEEeccc---cc-----cCCHHHHHHHHHcCCeEEEecCCC
Confidence 332110 011111111 1235888885542 21 133332 2 145788888877
Q ss_pred CCchHHHHHHHHCCCeeecc
Q 010101 466 PRNTRLLREAAEVGATVVSG 485 (518)
Q Consensus 466 P~~T~ll~~A~~~G~~~i~G 485 (518)
|-...-.+.-+++|+.++++
T Consensus 356 p~t~eA~~~L~~~GI~~~PD 375 (454)
T PTZ00079 356 PTTIEATHLFKKNGVIFCPG 375 (454)
T ss_pred CCCHHHHHHHHHCCcEEECh
Confidence 75333333335666655544
No 300
>PRK07814 short chain dehydrogenase; Provisional
Probab=95.78 E-value=0.024 Score=56.06 Aligned_cols=47 Identities=28% Similarity=0.463 Sum_probs=41.8
Q ss_pred ccCCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHh
Q 010101 364 PIAGKIFVLVGA-GGAGRALAFGAKSRGARVIIFNRNYERAKALADAV 410 (518)
Q Consensus 364 ~l~~k~vlvlGa-Gg~araia~~L~~~G~~v~i~nRt~~ka~~la~~~ 410 (518)
++++++++|.|+ ||.|++++..|.+.|++|.++.|+.++.+++.+.+
T Consensus 7 ~~~~~~vlItGasggIG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l 54 (263)
T PRK07814 7 RLDDQVAVVTGAGRGLGAAIALAFAEAGADVLIAARTESQLDEVAEQI 54 (263)
T ss_pred cCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHH
Confidence 467899999998 47999999999999999999999999888887665
No 301
>cd05292 LDH_2 A subgroup of L-lactate dehydrogenases. L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed predominantly of bacterial LDHs and a few fungal LDHs. Bacterial LDHs may be non-allosteric or may be activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.
Probab=95.78 E-value=0.034 Score=56.88 Aligned_cols=71 Identities=17% Similarity=0.206 Sum_probs=52.3
Q ss_pred EEEEEccchhHHHHHHHHHHCCC--eEEEEeCCHHHHHHHHHHhcCcc-c------ccccccccCCCCccEEEEcCCCCC
Q 010101 369 IFVLVGAGGAGRALAFGAKSRGA--RVIIFNRNYERAKALADAVSGEA-L------HFEYLHEFFPEKGMILANASAIGM 439 (518)
Q Consensus 369 ~vlvlGaGg~araia~~L~~~G~--~v~i~nRt~~ka~~la~~~~~~~-~------~~~~l~~~~~~~~divInatp~g~ 439 (518)
++.|||+|.+|.++++.|+..|. +|.+++|+.++++..+.++.... . ...+.+ ...++|++|.|.+.+.
T Consensus 2 kI~IIGaG~VG~~~a~~l~~~g~~~ev~l~D~~~~~~~g~a~dl~~~~~~~~~~~i~~~d~~--~l~~aDiViita~~~~ 79 (308)
T cd05292 2 KVAIVGAGFVGSTTAYALLLRGLASEIVLVDINKAKAEGEAMDLAHGTPFVKPVRIYAGDYA--DCKGADVVVITAGANQ 79 (308)
T ss_pred EEEEECCCHHHHHHHHHHHHcCCCCEEEEEECCchhhhhHHHHHHccccccCCeEEeeCCHH--HhCCCCEEEEccCCCC
Confidence 68999999999999999999994 89999999988876555443211 0 001222 3567999999998765
Q ss_pred CC
Q 010101 440 EP 441 (518)
Q Consensus 440 ~~ 441 (518)
.|
T Consensus 80 ~~ 81 (308)
T cd05292 80 KP 81 (308)
T ss_pred CC
Confidence 44
No 302
>PF02254 TrkA_N: TrkA-N domain; InterPro: IPR003148 The regulator of K+ conductance (RCK) domain is found in many ligand-gated K+ channels, most often attached to the intracellular carboxy terminus. The domain is prevalent among prokaryotic K+ channels, and also found in eukaryotic, high-conductance Ca2+-activated K+ channels (BK channels) [, , ]. Largely involved in redox-linked regulation of potassium channels, the N-terminal part of the RCK domain is predicted to be an active dehydrogenase at least in some cases []. Some have a conserved sequence motif (G-x-G-x-x-G-x(n)-[DE]) for NAD+ binding [], but others do not, reflecting the diversity of ligands for RCK domains. The C-terminal part is less conserved, being absent in some channels, such as the kefC antiporter from Escherichia coli. It is predicted to bind unidentified ligands and to regulate sulphate, sodium and other transporters. The X-ray structure of several RCK domains has been solved [, , ]. It reveals an alpha-beta fold similar to dehydrogenase enzymes. The domain forms a homodimer, producing a cleft between two lobes. It has a composite structure, with an N-terminal (RCK-N), and a C-terminal (RCK-C) subdomain. The RCK-N subdomain forms a Rossmann fold with two alpha helices on one side of a six stranded parallel beta sheet and three alpha helices on the other side. The RCK-C subdomain is an all-beta-strand fold. It forms an extention of the dimer interface and further stabilises the RCK homodimer [, , ]. Ca2+ is a ligand that opens the channel in a concentration-dependent manner. Two Ca2+ ions are located at the base of a cleft between two RCK domains, coordinated by the carboxylate groups of two glutamate residues, and by an aspartate residue [, , ]. RCK domains occur in at least five different contexts: As a single domain on the C terminus of some K+ channels (for example, many prokaryotic K+ channels). As two tandem RCK domains on the C terminus of some transporters that form gating rings (for example, eukaryotic BK channels). The gating ring has an arrangement of eight identical RCK domains, one from each of the four pore-forming subunits and four from the intracellular solution. As two domains, one at the N terminus and another at the C terminus of transporter (for example, the prokaryotic trk system potassium uptake protein A). As a soluble protein (not part of a K+ channel) consisting of two tandem RCK domains. As a soluble protein consisting of a single RCK domain. This entry represents the N-terminal subdomain of RCK.; GO: 0006813 potassium ion transport; PDB: 3L4B_E 1LSS_C 3LLV_A 2FY8_D 2AEF_A 1LNQ_E 3RBX_C 3KXD_A 2AEJ_A 3RBZ_A ....
Probab=95.77 E-value=0.03 Score=48.14 Aligned_cols=66 Identities=27% Similarity=0.312 Sum_probs=48.9
Q ss_pred EEEEccchhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHhcCcc-----cccccccccCCCCccEEEEcCC
Q 010101 370 FVLVGAGGAGRALAFGAKSRGARVIIFNRNYERAKALADAVSGEA-----LHFEYLHEFFPEKGMILANASA 436 (518)
Q Consensus 370 vlvlGaGg~araia~~L~~~G~~v~i~nRt~~ka~~la~~~~~~~-----~~~~~l~~~~~~~~divInatp 436 (518)
++|+|.|..|+.++..|.+.+.+|+++.+++++.+++.+.. ... .+.+.+....+.+++.+|-+|+
T Consensus 1 vvI~G~g~~~~~i~~~L~~~~~~vvvid~d~~~~~~~~~~~-~~~i~gd~~~~~~l~~a~i~~a~~vv~~~~ 71 (116)
T PF02254_consen 1 VVIIGYGRIGREIAEQLKEGGIDVVVIDRDPERVEELREEG-VEVIYGDATDPEVLERAGIEKADAVVILTD 71 (116)
T ss_dssp EEEES-SHHHHHHHHHHHHTTSEEEEEESSHHHHHHHHHTT-SEEEES-TTSHHHHHHTTGGCESEEEEESS
T ss_pred eEEEcCCHHHHHHHHHHHhCCCEEEEEECCcHHHHHHHhcc-cccccccchhhhHHhhcCccccCEEEEccC
Confidence 58999999999999999996669999999999998887654 221 1222233334677888888775
No 303
>PRK06484 short chain dehydrogenase; Validated
Probab=95.73 E-value=0.03 Score=61.26 Aligned_cols=74 Identities=28% Similarity=0.385 Sum_probs=54.7
Q ss_pred ccCCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHhcCccc----cccc---cccc------CCCCcc
Q 010101 364 PIAGKIFVLVGA-GGAGRALAFGAKSRGARVIIFNRNYERAKALADAVSGEAL----HFEY---LHEF------FPEKGM 429 (518)
Q Consensus 364 ~l~~k~vlvlGa-Gg~araia~~L~~~G~~v~i~nRt~~ka~~la~~~~~~~~----~~~~---l~~~------~~~~~d 429 (518)
...+|.++|.|+ ||.|++++..|++.|++|++++|+.++.+++++.++.... ++.+ +... .....|
T Consensus 266 ~~~~k~~lItGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id 345 (520)
T PRK06484 266 AESPRVVAITGGARGIGRAVADRFAAAGDRLLIIDRDAEGAKKLAEALGDEHLSVQADITDEAAVESAFAQIQARWGRLD 345 (520)
T ss_pred ccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceeEEEccCCCHHHHHHHHHHHHHHcCCCC
Confidence 346899999987 6899999999999999999999999999999887754321 1111 1110 124579
Q ss_pred EEEEcCCC
Q 010101 430 ILANASAI 437 (518)
Q Consensus 430 ivInatp~ 437 (518)
++||+...
T Consensus 346 ~li~nAg~ 353 (520)
T PRK06484 346 VLVNNAGI 353 (520)
T ss_pred EEEECCCC
Confidence 99998754
No 304
>PRK14030 glutamate dehydrogenase; Provisional
Probab=95.73 E-value=0.11 Score=55.52 Aligned_cols=130 Identities=15% Similarity=0.154 Sum_probs=80.1
Q ss_pred CHHHHHHHHHHHHHhhccCCCCCCCCcccCCcEEEEEccchhHHHHHHHHHHCCCeEEE--------Ee---CCHHHHHH
Q 010101 337 DCESAISAIEDALRERQGINGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGARVII--------FN---RNYERAKA 405 (518)
Q Consensus 337 D~~G~~~~l~~~l~~~~~~~~~~~~~~~l~~k~vlvlGaGg~araia~~L~~~G~~v~i--------~n---Rt~~ka~~ 405 (518)
-+.|...+++..+... | .+++|++|.|-|.|.+|..++..|.+.|++|+. +| -+.++.+.
T Consensus 207 Tg~Gv~~~~~~~~~~~-g--------~~l~g~~vaIQGfGnVG~~aA~~L~e~GakvVavSD~~G~i~d~~Gld~~~l~~ 277 (445)
T PRK14030 207 TGFGALYFVHQMLETK-G--------IDIKGKTVAISGFGNVAWGAATKATELGAKVVTISGPDGYIYDPDGISGEKIDY 277 (445)
T ss_pred cHHHHHHHHHHHHHHc-C--------CCcCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEEcCCceEECCCCCCHHHHHH
Confidence 3778777777766543 3 578999999999999999999999999998776 67 56665332
Q ss_pred HHH---H-----------h-cCcccccccccccCCCCccEEEEcCCCCCCCCCCCCCCCh---hhhc--CCCEEEEEeeC
Q 010101 406 LAD---A-----------V-SGEALHFEYLHEFFPEKGMILANASAIGMEPNSDQSPVPK---EALK--AYELVFDAVYT 465 (518)
Q Consensus 406 la~---~-----------~-~~~~~~~~~l~~~~~~~~divInatp~g~~~~~~~~~~~~---~~l~--~~~~v~Di~Y~ 465 (518)
|.+ . + +.+.++-+++ ....+||+|-|. +... +.. ..+. ...+|+.-.-+
T Consensus 278 l~~~k~~~~~~~~~~~~~~~ga~~i~~~~~---~~~~cDVliPcA---l~n~-----I~~~na~~l~~~~ak~V~EgAN~ 346 (445)
T PRK14030 278 MLELRASGNDIVAPYAEKFPGSTFFAGKKP---WEQKVDIALPCA---TQNE-----LNGEDADKLIKNGVLCVAEVSNM 346 (445)
T ss_pred HHHHHHhcCccHHHHHhcCCCCEEcCCccc---eeccccEEeecc---cccc-----CCHHHHHHHHHcCCeEEEeCCCC
Confidence 321 1 1 1111111111 123588888554 2222 333 2342 45789999888
Q ss_pred CCchHHHHHHHHCCCeeeccH
Q 010101 466 PRNTRLLREAAEVGATVVSGV 486 (518)
Q Consensus 466 P~~T~ll~~A~~~G~~~i~G~ 486 (518)
|....-.+.-+++|+.++++.
T Consensus 347 p~t~eA~~iL~~rGI~~vPD~ 367 (445)
T PRK14030 347 GCTAEAIDKFIAAKQLFAPGK 367 (445)
T ss_pred CCCHHHHHHHHHCCCEEeCcc
Confidence 743333344466777666543
No 305
>PRK11064 wecC UDP-N-acetyl-D-mannosamine dehydrogenase; Provisional
Probab=95.71 E-value=0.054 Score=57.77 Aligned_cols=105 Identities=19% Similarity=0.181 Sum_probs=66.3
Q ss_pred cEEEEEccchhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHhcC-cccccccc------------cccCCCCccEEEEc
Q 010101 368 KIFVLVGAGGAGRALAFGAKSRGARVIIFNRNYERAKALADAVSG-EALHFEYL------------HEFFPEKGMILANA 434 (518)
Q Consensus 368 k~vlvlGaGg~araia~~L~~~G~~v~i~nRt~~ka~~la~~~~~-~~~~~~~l------------~~~~~~~~divIna 434 (518)
+++.|||.|-+|..++..|++.|++|+.++|++++.+.+....-. ....++++ .. ...++|++|-|
T Consensus 4 ~kI~VIGlG~~G~~~A~~La~~G~~V~~~D~~~~~v~~l~~g~~~~~e~~l~~~l~~~~~~g~l~~~~-~~~~aDvvii~ 82 (415)
T PRK11064 4 ETISVIGLGYIGLPTAAAFASRQKQVIGVDINQHAVDTINRGEIHIVEPDLDMVVKTAVEGGYLRATT-TPEPADAFLIA 82 (415)
T ss_pred cEEEEECcchhhHHHHHHHHhCCCEEEEEeCCHHHHHHHHCCCCCcCCCCHHHHHHHHhhcCceeeec-ccccCCEEEEE
Confidence 579999999999999999999999999999999998876421100 00000000 01 13468999999
Q ss_pred CCCCCCCCCCC--CCCC---h---hhhcCCCEEEEEeeCCC-chHHHH
Q 010101 435 SAIGMEPNSDQ--SPVP---K---EALKAYELVFDAVYTPR-NTRLLR 473 (518)
Q Consensus 435 tp~g~~~~~~~--~~~~---~---~~l~~~~~v~Di~Y~P~-~T~ll~ 473 (518)
.|....++... ..+. . ..++++.+|++....|. .|..+.
T Consensus 83 vptp~~~~~~~dl~~v~~~~~~i~~~l~~g~iVI~~STv~pgtt~~~~ 130 (415)
T PRK11064 83 VPTPFKGDHEPDLTYVEAAAKSIAPVLKKGDLVILESTSPVGATEQMA 130 (415)
T ss_pred cCCCCCCCCCcChHHHHHHHHHHHHhCCCCCEEEEeCCCCCCHHHHHH
Confidence 98754322110 0111 0 12466788988888654 444443
No 306
>PRK06197 short chain dehydrogenase; Provisional
Probab=95.71 E-value=0.023 Score=57.64 Aligned_cols=47 Identities=32% Similarity=0.506 Sum_probs=40.9
Q ss_pred ccCCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHh
Q 010101 364 PIAGKIFVLVGA-GGAGRALAFGAKSRGARVIIFNRNYERAKALADAV 410 (518)
Q Consensus 364 ~l~~k~vlvlGa-Gg~araia~~L~~~G~~v~i~nRt~~ka~~la~~~ 410 (518)
++++|+++|.|+ ||.|++++..|++.|++|+++.|+.+++++..+.+
T Consensus 13 ~~~~k~vlItGas~gIG~~~a~~l~~~G~~vi~~~r~~~~~~~~~~~l 60 (306)
T PRK06197 13 DQSGRVAVVTGANTGLGYETAAALAAKGAHVVLAVRNLDKGKAAAARI 60 (306)
T ss_pred cCCCCEEEEcCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHH
Confidence 467899999987 79999999999999999999999998877665544
No 307
>TIGR01832 kduD 2-deoxy-D-gluconate 3-dehydrogenase. This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation.
Probab=95.68 E-value=0.039 Score=53.74 Aligned_cols=36 Identities=31% Similarity=0.558 Sum_probs=33.1
Q ss_pred cCCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEeCCH
Q 010101 365 IAGKIFVLVGA-GGAGRALAFGAKSRGARVIIFNRNY 400 (518)
Q Consensus 365 l~~k~vlvlGa-Gg~araia~~L~~~G~~v~i~nRt~ 400 (518)
+++|+++|.|+ ||.|++++..|.+.|++|++++|+.
T Consensus 3 ~~~k~vlItGas~gIG~~ia~~l~~~G~~vi~~~r~~ 39 (248)
T TIGR01832 3 LEGKVALVTGANTGLGQGIAVGLAEAGADIVGAGRSE 39 (248)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCch
Confidence 57899999998 6899999999999999999999975
No 308
>PF00106 adh_short: short chain dehydrogenase alcohol dehydrogenase superfamily signature glucose/ribitol dehydrogenase family signature; InterPro: IPR002198 The short-chain dehydrogenases/reductases family (SDR) [] is a very large family of enzymes, most of which are known to be NAD- or NADP-dependent oxidoreductases. As the first member of this family to be characterised was Drosophila alcohol dehydrogenase, this family used to be called [, , ] 'insect-type', or 'short-chain' alcohol dehydrogenases. Most member of this family are proteins of about 250 to 300 amino acid residues. Most dehydrogenases possess at least 2 domains [], the first binding the coenzyme, often NAD, and the second binding the substrate. This latter domain determines the substrate specificity and contains amino acids involved in catalysis. Little sequence similarity has been found in the coenzyme binding domain although there is a large degree of structural similarity, and it has therefore been suggested that the structure of dehydrogenases has arisen through gene fusion of a common ancestral coenzyme nucleotide sequence with various substrate specific domains [].; GO: 0016491 oxidoreductase activity, 0008152 metabolic process; PDB: 3QWI_D 3QWF_G 3IS3_A 3QWH_C 3ITD_A 3L77_A 1HDC_C 2HSD_C 3KVO_A 3KZV_A ....
Probab=95.68 E-value=0.03 Score=50.92 Aligned_cols=44 Identities=41% Similarity=0.568 Sum_probs=38.6
Q ss_pred cEEEEEcc-chhHHHHHHHHHHCCC-eEEEEeCC--HHHHHHHHHHhc
Q 010101 368 KIFVLVGA-GGAGRALAFGAKSRGA-RVIIFNRN--YERAKALADAVS 411 (518)
Q Consensus 368 k~vlvlGa-Gg~araia~~L~~~G~-~v~i~nRt--~~ka~~la~~~~ 411 (518)
|.++|+|+ ||.|++++.+|.+.|. +|.++.|+ .++++++.+.+.
T Consensus 1 k~~lItGa~~giG~~~a~~l~~~g~~~v~~~~r~~~~~~~~~l~~~l~ 48 (167)
T PF00106_consen 1 KTVLITGASSGIGRALARALARRGARVVILTSRSEDSEGAQELIQELK 48 (167)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHTTTEEEEEEESSCHHHHHHHHHHHHH
T ss_pred CEEEEECCCCHHHHHHHHHHHhcCceEEEEeeeccccccccccccccc
Confidence 57899986 6899999999999988 99999999 888888877664
No 309
>PRK07035 short chain dehydrogenase; Provisional
Probab=95.67 E-value=0.029 Score=54.93 Aligned_cols=48 Identities=38% Similarity=0.556 Sum_probs=42.3
Q ss_pred cccCCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHh
Q 010101 363 SPIAGKIFVLVGA-GGAGRALAFGAKSRGARVIIFNRNYERAKALADAV 410 (518)
Q Consensus 363 ~~l~~k~vlvlGa-Gg~araia~~L~~~G~~v~i~nRt~~ka~~la~~~ 410 (518)
..+++|+++|.|+ ||.|++++..|.+.|++|.+++|+.++++++.+++
T Consensus 4 ~~l~~k~vlItGas~gIG~~l~~~l~~~G~~Vi~~~r~~~~~~~~~~~~ 52 (252)
T PRK07035 4 FDLTGKIALVTGASRGIGEAIAKLLAQQGAHVIVSSRKLDGCQAVADAI 52 (252)
T ss_pred cccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHH
Confidence 3567899999987 68999999999999999999999999888887765
No 310
>PRK07831 short chain dehydrogenase; Provisional
Probab=95.67 E-value=0.029 Score=55.34 Aligned_cols=47 Identities=38% Similarity=0.508 Sum_probs=40.1
Q ss_pred ccCCcEEEEEcc-c-hhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHh
Q 010101 364 PIAGKIFVLVGA-G-GAGRALAFGAKSRGARVIIFNRNYERAKALADAV 410 (518)
Q Consensus 364 ~l~~k~vlvlGa-G-g~araia~~L~~~G~~v~i~nRt~~ka~~la~~~ 410 (518)
.+++++++|.|+ | |.|++++..|++.|++|++++|+.++.++..+.+
T Consensus 14 ~~~~k~vlItG~sg~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~ 62 (262)
T PRK07831 14 LLAGKVVLVTAAAGTGIGSATARRALEEGARVVISDIHERRLGETADEL 62 (262)
T ss_pred ccCCCEEEEECCCcccHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHH
Confidence 456899999997 6 8999999999999999999999988776665543
No 311
>TIGR02279 PaaC-3OHAcCoADH 3-hydroxyacyl-CoA dehydrogenase PaaC. This 3-hydroxyacyl-CoA dehydrogenase is involved in the degradation of phenylacetic acid, presumably in steps following the opening of the phenyl ring. The sequences included in this model are all found in aparrent operons with other related genes such as paaA, paaB, paaD, paaE, paaF and paaN. Some genomes contain these other genes without an apparent paaC in the same operon - possibly in these cases a different dehydrogenase involved in fatty acid degradation may fill in the needed activity. This enzyme has domains which are members of the pfam02737 and pfam00725 families.
Probab=95.67 E-value=0.018 Score=62.86 Aligned_cols=39 Identities=26% Similarity=0.399 Sum_probs=36.1
Q ss_pred cEEEEEccchhHHHHHHHHHHCCCeEEEEeCCHHHHHHH
Q 010101 368 KIFVLVGAGGAGRALAFGAKSRGARVIIFNRNYERAKAL 406 (518)
Q Consensus 368 k~vlvlGaGg~araia~~L~~~G~~v~i~nRt~~ka~~l 406 (518)
++|.|||+|-||+.++..|+..|++|+++||++++++..
T Consensus 6 ~kV~VIGaG~MG~gIA~~la~aG~~V~l~d~~~e~l~~~ 44 (503)
T TIGR02279 6 VTVAVIGAGAMGAGIAQVAASAGHQVLLYDIRAEALARA 44 (503)
T ss_pred cEEEEECcCHHHHHHHHHHHhCCCeEEEEeCCHHHHHHH
Confidence 679999999999999999999999999999999987653
No 312
>PRK07370 enoyl-(acyl carrier protein) reductase; Validated
Probab=95.65 E-value=0.034 Score=55.02 Aligned_cols=35 Identities=20% Similarity=0.209 Sum_probs=30.7
Q ss_pred cCCcEEEEEcc---chhHHHHHHHHHHCCCeEEEEeCC
Q 010101 365 IAGKIFVLVGA---GGAGRALAFGAKSRGARVIIFNRN 399 (518)
Q Consensus 365 l~~k~vlvlGa---Gg~araia~~L~~~G~~v~i~nRt 399 (518)
+++|.++|.|+ +|.|++++..|++.|++|++..|+
T Consensus 4 l~~k~~lItGas~~~GIG~aia~~la~~G~~v~~~~~~ 41 (258)
T PRK07370 4 LTGKKALVTGIANNRSIAWGIAQQLHAAGAELGITYLP 41 (258)
T ss_pred cCCcEEEEeCCCCCCchHHHHHHHHHHCCCEEEEEecC
Confidence 56899999997 499999999999999999888654
No 313
>PRK08690 enoyl-(acyl carrier protein) reductase; Provisional
Probab=95.65 E-value=0.031 Score=55.42 Aligned_cols=74 Identities=15% Similarity=0.193 Sum_probs=48.2
Q ss_pred cCCcEEEEEcc---chhHHHHHHHHHHCCCeEEEEeCCH---HHHHHHHHHhcCcc---ccccc---cccc------CCC
Q 010101 365 IAGKIFVLVGA---GGAGRALAFGAKSRGARVIIFNRNY---ERAKALADAVSGEA---LHFEY---LHEF------FPE 426 (518)
Q Consensus 365 l~~k~vlvlGa---Gg~araia~~L~~~G~~v~i~nRt~---~ka~~la~~~~~~~---~~~~~---l~~~------~~~ 426 (518)
+++|.++|.|+ +|.|++++..|++.|++|++..|+. ++++++.++.+... .++.+ +... ...
T Consensus 4 ~~~k~~lITGa~~~~GIG~a~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g 83 (261)
T PRK08690 4 LQGKKILITGMISERSIAYGIAKACREQGAELAFTYVVDKLEERVRKMAAELDSELVFRCDVASDDEINQVFADLGKHWD 83 (261)
T ss_pred cCCcEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCcHHHHHHHHHHHhccCCceEEECCCCCHHHHHHHHHHHHHHhC
Confidence 56899999994 5999999999999999999887653 34445544433211 11111 1100 124
Q ss_pred CccEEEEcCCCC
Q 010101 427 KGMILANASAIG 438 (518)
Q Consensus 427 ~~divInatp~g 438 (518)
..|++||+...+
T Consensus 84 ~iD~lVnnAG~~ 95 (261)
T PRK08690 84 GLDGLVHSIGFA 95 (261)
T ss_pred CCcEEEECCccC
Confidence 579999997654
No 314
>PRK06505 enoyl-(acyl carrier protein) reductase; Provisional
Probab=95.63 E-value=0.023 Score=56.78 Aligned_cols=74 Identities=16% Similarity=0.163 Sum_probs=49.7
Q ss_pred cCCcEEEEEccc---hhHHHHHHHHHHCCCeEEEEeCCHHH---HHHHHHHhcCcc---ccccc---cccc------CCC
Q 010101 365 IAGKIFVLVGAG---GAGRALAFGAKSRGARVIIFNRNYER---AKALADAVSGEA---LHFEY---LHEF------FPE 426 (518)
Q Consensus 365 l~~k~vlvlGaG---g~araia~~L~~~G~~v~i~nRt~~k---a~~la~~~~~~~---~~~~~---l~~~------~~~ 426 (518)
+++|.++|.|++ |.|++++.+|++.|++|.++.|+.+. .+++.+.++... .++.+ +... ...
T Consensus 5 l~~k~~lVTGas~~~GIG~aiA~~la~~Ga~V~~~~r~~~~~~~~~~~~~~~g~~~~~~~Dv~d~~~v~~~~~~~~~~~g 84 (271)
T PRK06505 5 MQGKRGLIMGVANDHSIAWGIAKQLAAQGAELAFTYQGEALGKRVKPLAESLGSDFVLPCDVEDIASVDAVFEALEKKWG 84 (271)
T ss_pred cCCCEEEEeCCCCCCcHHHHHHHHHHhCCCEEEEecCchHHHHHHHHHHHhcCCceEEeCCCCCHHHHHHHHHHHHHHhC
Confidence 568999999997 89999999999999999999998643 334444443211 12211 1000 124
Q ss_pred CccEEEEcCCCC
Q 010101 427 KGMILANASAIG 438 (518)
Q Consensus 427 ~~divInatp~g 438 (518)
..|++||+....
T Consensus 85 ~iD~lVnnAG~~ 96 (271)
T PRK06505 85 KLDFVVHAIGFS 96 (271)
T ss_pred CCCEEEECCccC
Confidence 679999987543
No 315
>PRK07109 short chain dehydrogenase; Provisional
Probab=95.63 E-value=0.029 Score=57.99 Aligned_cols=47 Identities=40% Similarity=0.649 Sum_probs=41.9
Q ss_pred ccCCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHh
Q 010101 364 PIAGKIFVLVGA-GGAGRALAFGAKSRGARVIIFNRNYERAKALADAV 410 (518)
Q Consensus 364 ~l~~k~vlvlGa-Gg~araia~~L~~~G~~v~i~nRt~~ka~~la~~~ 410 (518)
.+++++++|.|+ ||.|++++..|++.|++|++++|+.++++++.+++
T Consensus 5 ~l~~k~vlITGas~gIG~~la~~la~~G~~Vvl~~R~~~~l~~~~~~l 52 (334)
T PRK07109 5 PIGRQVVVITGASAGVGRATARAFARRGAKVVLLARGEEGLEALAAEI 52 (334)
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHH
Confidence 466889999998 78999999999999999999999999888887665
No 316
>PRK07067 sorbitol dehydrogenase; Provisional
Probab=95.61 E-value=0.028 Score=55.19 Aligned_cols=47 Identities=36% Similarity=0.489 Sum_probs=42.2
Q ss_pred cCCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHhc
Q 010101 365 IAGKIFVLVGA-GGAGRALAFGAKSRGARVIIFNRNYERAKALADAVS 411 (518)
Q Consensus 365 l~~k~vlvlGa-Gg~araia~~L~~~G~~v~i~nRt~~ka~~la~~~~ 411 (518)
+.+++++|.|+ ||.|++++..|++.|++|++++|+.++.+++.+.++
T Consensus 4 l~~~~vlItGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~ 51 (257)
T PRK07067 4 LQGKVALLTGAASGIGEAVAERYLAEGARVVIADIKPARARLAALEIG 51 (257)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHhC
Confidence 46789999997 789999999999999999999999999888887765
No 317
>PRK12921 2-dehydropantoate 2-reductase; Provisional
Probab=95.61 E-value=0.026 Score=57.18 Aligned_cols=67 Identities=22% Similarity=0.164 Sum_probs=47.7
Q ss_pred EEEEEccchhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHhcCcc--------cc---cccccccCCCCccEEEEcCCC
Q 010101 369 IFVLVGAGGAGRALAFGAKSRGARVIIFNRNYERAKALADAVSGEA--------LH---FEYLHEFFPEKGMILANASAI 437 (518)
Q Consensus 369 ~vlvlGaGg~araia~~L~~~G~~v~i~nRt~~ka~~la~~~~~~~--------~~---~~~l~~~~~~~~divInatp~ 437 (518)
+++|+|+|.+|.+++..|++.|.+|+++.| .++.+++.+. +... .. ..+..+ ....+|++|-|++.
T Consensus 2 kI~IiG~G~iG~~~a~~L~~~g~~V~~~~r-~~~~~~~~~~-g~~~~~~~~~~~~~~~~~~~~~~-~~~~~d~vilavk~ 78 (305)
T PRK12921 2 RIAVVGAGAVGGTFGGRLLEAGRDVTFLVR-PKRAKALRER-GLVIRSDHGDAVVPGPVITDPEE-LTGPFDLVILAVKA 78 (305)
T ss_pred eEEEECCCHHHHHHHHHHHHCCCceEEEec-HHHHHHHHhC-CeEEEeCCCeEEecceeecCHHH-ccCCCCEEEEEecc
Confidence 689999999999999999999999999999 7777776542 2110 00 111111 23568999988875
Q ss_pred C
Q 010101 438 G 438 (518)
Q Consensus 438 g 438 (518)
.
T Consensus 79 ~ 79 (305)
T PRK12921 79 Y 79 (305)
T ss_pred c
Confidence 3
No 318
>PRK05876 short chain dehydrogenase; Provisional
Probab=95.61 E-value=0.029 Score=56.19 Aligned_cols=47 Identities=23% Similarity=0.341 Sum_probs=41.5
Q ss_pred cCCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHhc
Q 010101 365 IAGKIFVLVGA-GGAGRALAFGAKSRGARVIIFNRNYERAKALADAVS 411 (518)
Q Consensus 365 l~~k~vlvlGa-Gg~araia~~L~~~G~~v~i~nRt~~ka~~la~~~~ 411 (518)
+++|+++|.|+ ||.|++++..|++.|++|.+++|+.++++++++++.
T Consensus 4 ~~~k~vlVTGas~gIG~ala~~La~~G~~Vv~~~r~~~~l~~~~~~l~ 51 (275)
T PRK05876 4 FPGRGAVITGGASGIGLATGTEFARRGARVVLGDVDKPGLRQAVNHLR 51 (275)
T ss_pred cCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHH
Confidence 56899999986 689999999999999999999999988888776653
No 319
>PRK12481 2-deoxy-D-gluconate 3-dehydrogenase; Provisional
Probab=95.60 E-value=0.038 Score=54.37 Aligned_cols=37 Identities=24% Similarity=0.495 Sum_probs=33.0
Q ss_pred ccCCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEeCCH
Q 010101 364 PIAGKIFVLVGA-GGAGRALAFGAKSRGARVIIFNRNY 400 (518)
Q Consensus 364 ~l~~k~vlvlGa-Gg~araia~~L~~~G~~v~i~nRt~ 400 (518)
.+++|+++|.|+ ||.|++++..|++.|++|.+++|+.
T Consensus 5 ~l~~k~~lItGas~gIG~aia~~l~~~G~~vv~~~~~~ 42 (251)
T PRK12481 5 DLNGKVAIITGCNTGLGQGMAIGLAKAGADIVGVGVAE 42 (251)
T ss_pred ccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCch
Confidence 467899999987 6899999999999999999999874
No 320
>PRK07097 gluconate 5-dehydrogenase; Provisional
Probab=95.60 E-value=0.032 Score=55.22 Aligned_cols=48 Identities=29% Similarity=0.306 Sum_probs=42.2
Q ss_pred cccCCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHh
Q 010101 363 SPIAGKIFVLVGA-GGAGRALAFGAKSRGARVIIFNRNYERAKALADAV 410 (518)
Q Consensus 363 ~~l~~k~vlvlGa-Gg~araia~~L~~~G~~v~i~nRt~~ka~~la~~~ 410 (518)
.++++|+++|.|+ ||+|++++..|++.|++|.+++|+.++.+++.+.+
T Consensus 6 ~~~~~k~~lItGa~~~iG~~ia~~l~~~G~~vv~~~~~~~~~~~~~~~~ 54 (265)
T PRK07097 6 FSLKGKIALITGASYGIGFAIAKAYAKAGATIVFNDINQELVDKGLAAY 54 (265)
T ss_pred cCCCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHH
Confidence 4567899999998 57999999999999999999999999888776665
No 321
>PRK06194 hypothetical protein; Provisional
Probab=95.59 E-value=0.03 Score=56.00 Aligned_cols=46 Identities=24% Similarity=0.369 Sum_probs=40.6
Q ss_pred cCCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHh
Q 010101 365 IAGKIFVLVGA-GGAGRALAFGAKSRGARVIIFNRNYERAKALADAV 410 (518)
Q Consensus 365 l~~k~vlvlGa-Gg~araia~~L~~~G~~v~i~nRt~~ka~~la~~~ 410 (518)
++++++||.|+ ||.|++++..|.+.|++|++++|+.++.+++++++
T Consensus 4 ~~~k~vlVtGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~ 50 (287)
T PRK06194 4 FAGKVAVITGAASGFGLAFARIGAALGMKLVLADVQQDALDRAVAEL 50 (287)
T ss_pred CCCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHH
Confidence 45789999987 78999999999999999999999988887777665
No 322
>PRK08268 3-hydroxy-acyl-CoA dehydrogenase; Validated
Probab=95.58 E-value=0.029 Score=61.33 Aligned_cols=39 Identities=26% Similarity=0.412 Sum_probs=36.4
Q ss_pred cEEEEEccchhHHHHHHHHHHCCCeEEEEeCCHHHHHHH
Q 010101 368 KIFVLVGAGGAGRALAFGAKSRGARVIIFNRNYERAKAL 406 (518)
Q Consensus 368 k~vlvlGaGg~araia~~L~~~G~~v~i~nRt~~ka~~l 406 (518)
++|.|||+|-||+.++..|+..|++|++++|++++++..
T Consensus 8 ~~V~VIGaG~MG~gIA~~la~aG~~V~l~D~~~e~l~~~ 46 (507)
T PRK08268 8 ATVAVIGAGAMGAGIAQVAAQAGHTVLLYDARAGAAAAA 46 (507)
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCeEEEEeCCHHHHHHH
Confidence 689999999999999999999999999999999988774
No 323
>PRK07453 protochlorophyllide oxidoreductase; Validated
Probab=95.57 E-value=0.031 Score=57.23 Aligned_cols=47 Identities=32% Similarity=0.383 Sum_probs=41.9
Q ss_pred cCCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHhc
Q 010101 365 IAGKIFVLVGA-GGAGRALAFGAKSRGARVIIFNRNYERAKALADAVS 411 (518)
Q Consensus 365 l~~k~vlvlGa-Gg~araia~~L~~~G~~v~i~nRt~~ka~~la~~~~ 411 (518)
..+|+++|.|+ ||+|++++..|.+.|++|++++|+.++++++.+++.
T Consensus 4 ~~~k~vlVTGas~gIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~l~ 51 (322)
T PRK07453 4 DAKGTVIITGASSGVGLYAAKALAKRGWHVIMACRNLKKAEAAAQELG 51 (322)
T ss_pred CCCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhh
Confidence 35789999987 789999999999999999999999999988877763
No 324
>PRK07411 hypothetical protein; Validated
Probab=95.56 E-value=0.017 Score=60.99 Aligned_cols=35 Identities=23% Similarity=0.422 Sum_probs=31.9
Q ss_pred cCCcEEEEEccchhHHHHHHHHHHCCC-eEEEEeCC
Q 010101 365 IAGKIFVLVGAGGAGRALAFGAKSRGA-RVIIFNRN 399 (518)
Q Consensus 365 l~~k~vlvlGaGg~araia~~L~~~G~-~v~i~nRt 399 (518)
+++.+|+|+|+||.|-.++..|+..|+ +++|++.+
T Consensus 36 L~~~~VlivG~GGlG~~va~~La~~Gvg~l~lvD~D 71 (390)
T PRK07411 36 LKAASVLCIGTGGLGSPLLLYLAAAGIGRIGIVDFD 71 (390)
T ss_pred HhcCcEEEECCCHHHHHHHHHHHHcCCCEEEEECCC
Confidence 457899999999999999999999999 99998854
No 325
>PLN00141 Tic62-NAD(P)-related group II protein; Provisional
Probab=95.56 E-value=0.02 Score=56.40 Aligned_cols=74 Identities=19% Similarity=0.170 Sum_probs=51.5
Q ss_pred ccCCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHh-cCccc--cccc----ccccCC-CCccEEEEc
Q 010101 364 PIAGKIFVLVGA-GGAGRALAFGAKSRGARVIIFNRNYERAKALADAV-SGEAL--HFEY----LHEFFP-EKGMILANA 434 (518)
Q Consensus 364 ~l~~k~vlvlGa-Gg~araia~~L~~~G~~v~i~nRt~~ka~~la~~~-~~~~~--~~~~----l~~~~~-~~~divIna 434 (518)
+.++++++|+|+ |+.|++++..|.+.|++|+.+.|+.++++++.... +...+ ++.+ +.. .. ...|+||++
T Consensus 14 ~~~~~~ilItGasG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~Dl~d~~~~l~~-~~~~~~d~vi~~ 92 (251)
T PLN00141 14 NVKTKTVFVAGATGRTGKRIVEQLLAKGFAVKAGVRDVDKAKTSLPQDPSLQIVRADVTEGSDKLVE-AIGDDSDAVICA 92 (251)
T ss_pred cccCCeEEEECCCcHHHHHHHHHHHhCCCEEEEEecCHHHHHHhcccCCceEEEEeeCCCCHHHHHH-HhhcCCCEEEEC
Confidence 456789999996 88999999999999999999999998876553321 11111 2222 112 23 468999988
Q ss_pred CCCC
Q 010101 435 SAIG 438 (518)
Q Consensus 435 tp~g 438 (518)
++..
T Consensus 93 ~g~~ 96 (251)
T PLN00141 93 TGFR 96 (251)
T ss_pred CCCC
Confidence 7653
No 326
>PRK06720 hypothetical protein; Provisional
Probab=95.56 E-value=0.037 Score=51.46 Aligned_cols=47 Identities=32% Similarity=0.582 Sum_probs=40.8
Q ss_pred ccCCcEEEEEccc-hhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHh
Q 010101 364 PIAGKIFVLVGAG-GAGRALAFGAKSRGARVIIFNRNYERAKALADAV 410 (518)
Q Consensus 364 ~l~~k~vlvlGaG-g~araia~~L~~~G~~v~i~nRt~~ka~~la~~~ 410 (518)
.++++.++|.|++ |+|++++..|.+.|++|.+++|+.+.+++.++++
T Consensus 13 ~l~gk~~lVTGa~~GIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l 60 (169)
T PRK06720 13 KLAGKVAIVTGGGIGIGRNTALLLAKQGAKVIVTDIDQESGQATVEEI 60 (169)
T ss_pred ccCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHH
Confidence 4678999999985 6999999999999999999999988877766554
No 327
>PRK06484 short chain dehydrogenase; Validated
Probab=95.55 E-value=0.033 Score=60.88 Aligned_cols=71 Identities=27% Similarity=0.450 Sum_probs=53.4
Q ss_pred CCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHhcCcc----ccccc---c-------cccCCCCccE
Q 010101 366 AGKIFVLVGA-GGAGRALAFGAKSRGARVIIFNRNYERAKALADAVSGEA----LHFEY---L-------HEFFPEKGMI 430 (518)
Q Consensus 366 ~~k~vlvlGa-Gg~araia~~L~~~G~~v~i~nRt~~ka~~la~~~~~~~----~~~~~---l-------~~~~~~~~di 430 (518)
++|.++|.|+ +|.|++++..|.+.|++|+++.|+.+++++++++++... .++.+ + .+ .....|+
T Consensus 4 ~~k~~lITGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~-~~g~iD~ 82 (520)
T PRK06484 4 QSRVVLVTGAAGGIGRAACQRFARAGDQVVVADRNVERARERADSLGPDHHALAMDVSDEAQIREGFEQLHR-EFGRIDV 82 (520)
T ss_pred CCeEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceeEEEeccCCHHHHHHHHHHHHH-HhCCCCE
Confidence 5789999988 589999999999999999999999999998888775432 11111 1 11 1245799
Q ss_pred EEEcCCC
Q 010101 431 LANASAI 437 (518)
Q Consensus 431 vInatp~ 437 (518)
+||+...
T Consensus 83 li~nag~ 89 (520)
T PRK06484 83 LVNNAGV 89 (520)
T ss_pred EEECCCc
Confidence 9998653
No 328
>PRK06997 enoyl-(acyl carrier protein) reductase; Provisional
Probab=95.54 E-value=0.04 Score=54.61 Aligned_cols=73 Identities=15% Similarity=0.160 Sum_probs=49.3
Q ss_pred cCCcEEEEEcc---chhHHHHHHHHHHCCCeEEEEeC---CHHHHHHHHHHhcCcc---ccccc---cccc------CCC
Q 010101 365 IAGKIFVLVGA---GGAGRALAFGAKSRGARVIIFNR---NYERAKALADAVSGEA---LHFEY---LHEF------FPE 426 (518)
Q Consensus 365 l~~k~vlvlGa---Gg~araia~~L~~~G~~v~i~nR---t~~ka~~la~~~~~~~---~~~~~---l~~~------~~~ 426 (518)
+++|+++|.|+ +|.|++++..|++.|++|++..| +.++.+++.++++... .++.+ +... ...
T Consensus 4 l~~k~vlItGas~~~GIG~a~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g 83 (260)
T PRK06997 4 LAGKRILITGLLSNRSIAYGIAKACKREGAELAFTYVGDRFKDRITEFAAEFGSDLVFPCDVASDEQIDALFASLGQHWD 83 (260)
T ss_pred cCCcEEEEeCCCCCCcHHHHHHHHHHHCCCeEEEEccchHHHHHHHHHHHhcCCcceeeccCCCHHHHHHHHHHHHHHhC
Confidence 56899999994 59999999999999999988754 4566666666554211 11111 1100 124
Q ss_pred CccEEEEcCCC
Q 010101 427 KGMILANASAI 437 (518)
Q Consensus 427 ~~divInatp~ 437 (518)
..|++||+...
T Consensus 84 ~iD~lvnnAG~ 94 (260)
T PRK06997 84 GLDGLVHSIGF 94 (260)
T ss_pred CCcEEEEcccc
Confidence 67999998754
No 329
>PRK07878 molybdopterin biosynthesis-like protein MoeZ; Validated
Probab=95.54 E-value=0.018 Score=60.93 Aligned_cols=35 Identities=20% Similarity=0.351 Sum_probs=31.7
Q ss_pred cCCcEEEEEccchhHHHHHHHHHHCCC-eEEEEeCC
Q 010101 365 IAGKIFVLVGAGGAGRALAFGAKSRGA-RVIIFNRN 399 (518)
Q Consensus 365 l~~k~vlvlGaGg~araia~~L~~~G~-~v~i~nRt 399 (518)
+++.+|+|+|+||.|..++..|+..|+ +|+|++.+
T Consensus 40 L~~~~VlviG~GGlGs~va~~La~~Gvg~i~lvD~D 75 (392)
T PRK07878 40 LKNARVLVIGAGGLGSPTLLYLAAAGVGTLGIVEFD 75 (392)
T ss_pred HhcCCEEEECCCHHHHHHHHHHHHcCCCeEEEECCC
Confidence 456899999999999999999999999 99999854
No 330
>KOG0069 consensus Glyoxylate/hydroxypyruvate reductase (D-isomer-specific 2-hydroxy acid dehydrogenase superfamily) [Energy production and conversion]
Probab=95.54 E-value=0.021 Score=58.54 Aligned_cols=118 Identities=17% Similarity=0.231 Sum_probs=72.5
Q ss_pred cccCCcEEEEEccchhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHhcCcccccccccccCCCCccEEEEcCCCCCCCC
Q 010101 363 SPIAGKIFVLVGAGGAGRALAFGAKSRGARVIIFNRNYERAKALADAVSGEALHFEYLHEFFPEKGMILANASAIGMEPN 442 (518)
Q Consensus 363 ~~l~~k~vlvlGaGg~araia~~L~~~G~~v~i~nRt~~ka~~la~~~~~~~~~~~~l~~~~~~~~divInatp~g~~~~ 442 (518)
..+.||+|.|+|.|..|++++..|...|+.|.-.+|+..+-+.. .+++.+..++++ .+.++|+||.+.|..-..
T Consensus 158 ~~~~gK~vgilG~G~IG~~ia~rL~~Fg~~i~y~~r~~~~~~~~-~~~~~~~~d~~~----~~~~sD~ivv~~pLt~~T- 231 (336)
T KOG0069|consen 158 YDLEGKTVGILGLGRIGKAIAKRLKPFGCVILYHSRTQLPPEEA-YEYYAEFVDIEE----LLANSDVIVVNCPLTKET- 231 (336)
T ss_pred ccccCCEEEEecCcHHHHHHHHhhhhccceeeeecccCCchhhH-HHhcccccCHHH----HHhhCCEEEEecCCCHHH-
Confidence 45789999999999999999999999998899999987665443 334444444444 345789999888875221
Q ss_pred CCCCCCChhh---hcCCCEEEEEeeCCC-chHHHHHHHHCCCeeeccHHH
Q 010101 443 SDQSPVPKEA---LKAYELVFDAVYTPR-NTRLLREAAEVGATVVSGVEM 488 (518)
Q Consensus 443 ~~~~~~~~~~---l~~~~~v~Di~Y~P~-~T~ll~~A~~~G~~~i~G~~m 488 (518)
.-.+..+. ++++.+++-..=.+- .-.-+.+|-+.|-..--|++.
T Consensus 232 --~~liNk~~~~~mk~g~vlVN~aRG~iide~~l~eaL~sG~i~~aGlDV 279 (336)
T KOG0069|consen 232 --RHLINKKFIEKMKDGAVLVNTARGAIIDEEALVEALKSGKIAGAGLDV 279 (336)
T ss_pred --HHHhhHHHHHhcCCCeEEEeccccccccHHHHHHHHhcCCcccccccc
Confidence 11234332 345555554433322 222233444444444444443
No 331
>PRK08217 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=95.54 E-value=0.034 Score=54.13 Aligned_cols=46 Identities=26% Similarity=0.460 Sum_probs=40.7
Q ss_pred cCCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHh
Q 010101 365 IAGKIFVLVGA-GGAGRALAFGAKSRGARVIIFNRNYERAKALADAV 410 (518)
Q Consensus 365 l~~k~vlvlGa-Gg~araia~~L~~~G~~v~i~nRt~~ka~~la~~~ 410 (518)
+++++++|+|+ ||.|++++..|.+.|++|++++|+.++.+++.+++
T Consensus 3 ~~~~~~lItG~~g~iG~~~a~~l~~~G~~vi~~~r~~~~~~~~~~~~ 49 (253)
T PRK08217 3 LKDKVIVITGGAQGLGRAMAEYLAQKGAKLALIDLNQEKLEEAVAEC 49 (253)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHH
Confidence 46789999998 89999999999999999999999998877776654
No 332
>TIGR01082 murC UDP-N-acetylmuramate--alanine ligase. UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase (murein tripeptide ligase) is described by TIGR01081.
Probab=95.53 E-value=0.061 Score=57.90 Aligned_cols=33 Identities=27% Similarity=0.239 Sum_probs=29.2
Q ss_pred EEEEEccchhHHH-HHHHHHHCCCeEEEEeCCHH
Q 010101 369 IFVLVGAGGAGRA-LAFGAKSRGARVIIFNRNYE 401 (518)
Q Consensus 369 ~vlvlGaGg~ara-ia~~L~~~G~~v~i~nRt~~ 401 (518)
++.++|.||+|.+ +|..|.++|++|+++++...
T Consensus 1 ~~~~iGiggsGm~~la~~L~~~G~~v~~~D~~~~ 34 (448)
T TIGR01082 1 KIHFVGIGGIGMSGIAEILLNRGYQVSGSDIAEN 34 (448)
T ss_pred CEEEEEECHHHHHHHHHHHHHCCCeEEEECCCcc
Confidence 3789999999998 89999999999999997654
No 333
>PRK09496 trkA potassium transporter peripheral membrane component; Reviewed
Probab=95.52 E-value=0.035 Score=59.63 Aligned_cols=69 Identities=23% Similarity=0.308 Sum_probs=52.7
Q ss_pred EEEEEccchhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHhcCccc-----ccccccccCCCCccEEEEcCCC
Q 010101 369 IFVLVGAGGAGRALAFGAKSRGARVIIFNRNYERAKALADAVSGEAL-----HFEYLHEFFPEKGMILANASAI 437 (518)
Q Consensus 369 ~vlvlGaGg~araia~~L~~~G~~v~i~nRt~~ka~~la~~~~~~~~-----~~~~l~~~~~~~~divInatp~ 437 (518)
+++|+|+|.+|++++..|.+.|.+|++++|++++.+++.+..+...+ ....+.+....++|.+|.+|+-
T Consensus 2 ~viIiG~G~ig~~~a~~L~~~g~~v~vid~~~~~~~~~~~~~~~~~~~gd~~~~~~l~~~~~~~a~~vi~~~~~ 75 (453)
T PRK09496 2 KIIIVGAGQVGYTLAENLSGENNDVTVIDTDEERLRRLQDRLDVRTVVGNGSSPDVLREAGAEDADLLIAVTDS 75 (453)
T ss_pred EEEEECCCHHHHHHHHHHHhCCCcEEEEECCHHHHHHHHhhcCEEEEEeCCCCHHHHHHcCCCcCCEEEEecCC
Confidence 68999999999999999999999999999999999888764443221 1122333235678999988863
No 334
>KOG0024 consensus Sorbitol dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]
Probab=95.52 E-value=0.033 Score=56.36 Aligned_cols=73 Identities=22% Similarity=0.242 Sum_probs=55.0
Q ss_pred CCcEEEEEccchhHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHHhcCcccc-------cccc----cc-cCCCCccEEE
Q 010101 366 AGKIFVLVGAGGAGRALAFGAKSRGA-RVIIFNRNYERAKALADAVSGEALH-------FEYL----HE-FFPEKGMILA 432 (518)
Q Consensus 366 ~~k~vlvlGaGg~araia~~L~~~G~-~v~i~nRt~~ka~~la~~~~~~~~~-------~~~l----~~-~~~~~~divI 432 (518)
.|.+|||+|||.+|......++..|+ +|.+++-.++|. ++|++||.+... .+++ .. ..-..+|+.|
T Consensus 169 ~Gs~vLV~GAGPIGl~t~l~Aka~GA~~VVi~d~~~~Rl-e~Ak~~Ga~~~~~~~~~~~~~~~~~~v~~~~g~~~~d~~~ 247 (354)
T KOG0024|consen 169 KGSKVLVLGAGPIGLLTGLVAKAMGASDVVITDLVANRL-ELAKKFGATVTDPSSHKSSPQELAELVEKALGKKQPDVTF 247 (354)
T ss_pred cCCeEEEECCcHHHHHHHHHHHHcCCCcEEEeecCHHHH-HHHHHhCCeEEeeccccccHHHHHHHHHhhccccCCCeEE
Confidence 47899999999999999999999999 999999998886 677779875321 1111 11 0113489999
Q ss_pred EcCCCCC
Q 010101 433 NASAIGM 439 (518)
Q Consensus 433 natp~g~ 439 (518)
+||.+.+
T Consensus 248 dCsG~~~ 254 (354)
T KOG0024|consen 248 DCSGAEV 254 (354)
T ss_pred EccCchH
Confidence 9997653
No 335
>PRK11790 D-3-phosphoglycerate dehydrogenase; Provisional
Probab=95.50 E-value=0.031 Score=59.52 Aligned_cols=38 Identities=32% Similarity=0.440 Sum_probs=35.0
Q ss_pred cccCCcEEEEEccchhHHHHHHHHHHCCCeEEEEeCCH
Q 010101 363 SPIAGKIFVLVGAGGAGRALAFGAKSRGARVIIFNRNY 400 (518)
Q Consensus 363 ~~l~~k~vlvlGaGg~araia~~L~~~G~~v~i~nRt~ 400 (518)
..+.||++.|+|.|.+|+.+|..+...|.+|..++|+.
T Consensus 147 ~~L~gktvGIiG~G~IG~~vA~~~~~fGm~V~~~d~~~ 184 (409)
T PRK11790 147 FEVRGKTLGIVGYGHIGTQLSVLAESLGMRVYFYDIED 184 (409)
T ss_pred ccCCCCEEEEECCCHHHHHHHHHHHHCCCEEEEECCCc
Confidence 35789999999999999999999999999999999874
No 336
>PTZ00082 L-lactate dehydrogenase; Provisional
Probab=95.48 E-value=0.039 Score=56.80 Aligned_cols=74 Identities=14% Similarity=0.172 Sum_probs=51.6
Q ss_pred CCcEEEEEccchhHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHHhcC-------c-cccc-ccccccCCCCccEEEEcC
Q 010101 366 AGKIFVLVGAGGAGRALAFGAKSRGA-RVIIFNRNYERAKALADAVSG-------E-ALHF-EYLHEFFPEKGMILANAS 435 (518)
Q Consensus 366 ~~k~vlvlGaGg~araia~~L~~~G~-~v~i~nRt~~ka~~la~~~~~-------~-~~~~-~~l~~~~~~~~divInat 435 (518)
+.+++.|||+|.+|.++++.++..|. +|+++++++++++.-+-++.. . .+.. .+.+ ...++|+||++.
T Consensus 5 ~~~KI~IIGaG~vG~~ia~~la~~gl~~i~LvDi~~~~~~~~~ld~~~~~~~~~~~~~I~~~~d~~--~l~~aDiVI~ta 82 (321)
T PTZ00082 5 KRRKISLIGSGNIGGVMAYLIVLKNLGDVVLFDIVKNIPQGKALDISHSNVIAGSNSKVIGTNNYE--DIAGSDVVIVTA 82 (321)
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCeEEEEeCCCchhhHHHHHHHhhhhccCCCeEEEECCCHH--HhCCCCEEEECC
Confidence 45789999999999999999999997 999999998865432222110 1 1111 2332 357899999988
Q ss_pred CCCCCC
Q 010101 436 AIGMEP 441 (518)
Q Consensus 436 p~g~~~ 441 (518)
..+-.|
T Consensus 83 g~~~~~ 88 (321)
T PTZ00082 83 GLTKRP 88 (321)
T ss_pred CCCCCC
Confidence 665444
No 337
>PRK13394 3-hydroxybutyrate dehydrogenase; Provisional
Probab=95.48 E-value=0.035 Score=54.44 Aligned_cols=47 Identities=36% Similarity=0.555 Sum_probs=41.7
Q ss_pred cCCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHhc
Q 010101 365 IAGKIFVLVGA-GGAGRALAFGAKSRGARVIIFNRNYERAKALADAVS 411 (518)
Q Consensus 365 l~~k~vlvlGa-Gg~araia~~L~~~G~~v~i~nRt~~ka~~la~~~~ 411 (518)
+++++++|.|+ |++|++++..|++.|++|.+++|+.++.+++.+.+.
T Consensus 5 ~~~~~vlItGasg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~ 52 (262)
T PRK13394 5 LNGKTAVVTGAASGIGKEIALELARAGAAVAIADLNQDGANAVADEIN 52 (262)
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHH
Confidence 56899999998 889999999999999999999999988877776653
No 338
>COG3268 Uncharacterized conserved protein [Function unknown]
Probab=95.48 E-value=0.027 Score=56.98 Aligned_cols=116 Identities=20% Similarity=0.181 Sum_probs=85.2
Q ss_pred cEEEEEcc-chhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHhcCccccccc-----ccccCCCCccEEEEcCCCCCCC
Q 010101 368 KIFVLVGA-GGAGRALAFGAKSRGARVIIFNRNYERAKALADAVSGEALHFEY-----LHEFFPEKGMILANASAIGMEP 441 (518)
Q Consensus 368 k~vlvlGa-Gg~araia~~L~~~G~~v~i~nRt~~ka~~la~~~~~~~~~~~~-----l~~~~~~~~divInatp~g~~~ 441 (518)
...+|.|| |-+|+-++.+|+..|.+-.+.+|+..|...+.+.++.+...|+- +.+ .....++|+||..+ +.
T Consensus 7 ~d~iiYGAtGy~G~lvae~l~~~g~~~aLAgRs~~kl~~l~~~LG~~~~~~p~~~p~~~~~-~~~~~~VVlncvGP--yt 83 (382)
T COG3268 7 YDIIIYGATGYAGGLVAEYLAREGLTAALAGRSSAKLDALRASLGPEAAVFPLGVPAALEA-MASRTQVVLNCVGP--YT 83 (382)
T ss_pred eeEEEEccccchhHHHHHHHHHcCCchhhccCCHHHHHHHHHhcCccccccCCCCHHHHHH-HHhcceEEEecccc--cc
Confidence 46899999 66999999999999998899999999999999999987655532 222 35678999999853 21
Q ss_pred CCCCCCCChhhhcCCCEEEEEeeCCC-----chHHHHHHHHCCCeeeccHH
Q 010101 442 NSDQSPVPKEALKAYELVFDAVYTPR-----NTRLLREAAEVGATVVSGVE 487 (518)
Q Consensus 442 ~~~~~~~~~~~l~~~~~v~Di~Y~P~-----~T~ll~~A~~~G~~~i~G~~ 487 (518)
. ...|+-..++..+.--+|+.=... ....-++|++.|+.+++|-+
T Consensus 84 ~-~g~plv~aC~~~GTdY~DiTGEi~~fe~~i~~yh~~A~~~Ga~Ii~~cG 133 (382)
T COG3268 84 R-YGEPLVAACAAAGTDYADITGEIMFFENSIDLYHAQAADAGARIIPGCG 133 (382)
T ss_pred c-cccHHHHHHHHhCCCeeeccccHHHHHHHHHHHHHHHHhcCCEEeccCC
Confidence 1 234555667777777778864322 12224678889999998754
No 339
>PRK07232 bifunctional malic enzyme oxidoreductase/phosphotransacetylase; Reviewed
Probab=95.47 E-value=0.066 Score=60.81 Aligned_cols=190 Identities=20% Similarity=0.220 Sum_probs=103.9
Q ss_pred HHHHc-CCCceEEecccCcHHHHHHHh--cCCCCCEEEecccchHHHHhcccccChhhhhcCceeEEEEeccCCeEEEee
Q 010101 259 AFRHT-RFNGIYVPMLVDDVKEFFRTY--SGTDFAGFSVGIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYN 335 (518)
Q Consensus 259 ~f~~~-gl~~~y~~~~~~~l~~~~~~l--~~~~~~G~~VT~P~K~~v~~~~d~~~~~A~~iGavNTi~~~~~~g~l~G~N 335 (518)
.|+++ |+|..=+.++.+|.++|++.. ..+.|+|+|.-==--.+.+..++++-+ ..|.-++. |. .+|+-
T Consensus 95 l~~~~~gid~~~i~~~~~d~de~v~~v~~~~p~~g~i~~ED~~~p~~f~i~~~~~~------~~~ip~f~--DD-~~GTa 165 (752)
T PRK07232 95 LFKKFAGIDVFDIEVDEEDPDKFIEAVAALEPTFGGINLEDIKAPECFYIEEKLRE------RMDIPVFH--DD-QHGTA 165 (752)
T ss_pred HHHhhcCCCccccccCCCCHHHHHHHHHHhCCCccEEeeeecCCchHHHHHHHHHH------hcCCCeec--cc-cchHH
Confidence 34443 355332223335788888776 357899987532112223333322221 22333343 22 44433
Q ss_pred cC-HHHHHHHHHHHHHhhccCCCCCCCCcccCCcEEEEEccchhHHHHHHHHHHCCC---eEEEEeCC----HHH-----
Q 010101 336 TD-CESAISAIEDALRERQGINGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGA---RVIIFNRN----YER----- 402 (518)
Q Consensus 336 TD-~~G~~~~l~~~l~~~~~~~~~~~~~~~l~~k~vlvlGaGg~araia~~L~~~G~---~v~i~nRt----~~k----- 402 (518)
.= -.|++++++- .| .+++..++++.|||.+|-+++..|...|. +|+++++. .++
T Consensus 166 ~v~lA~l~na~~~-----~~--------~~~~~~~iv~~GaGaag~~~a~~l~~~G~~~~~i~~~D~~G~i~~~r~~~~~ 232 (752)
T PRK07232 166 IISAAALLNALEL-----VG--------KKIEDVKIVVSGAGAAAIACLNLLVALGAKKENIIVCDSKGVIYKGRTEGMD 232 (752)
T ss_pred HHHHHHHHHHHHH-----hC--------CChhhcEEEEECccHHHHHHHHHHHHcCCCcccEEEEcCCCeecCCCccccc
Confidence 22 2334445432 12 46778899999999999999999999998 79998863 111
Q ss_pred -H-HHHHHHhcCcccccccccccCCCCccEEEEcCCCCCCCCCCCCCCChhhh---cCCCEEEEEee-CCCchHHHHHHH
Q 010101 403 -A-KALADAVSGEALHFEYLHEFFPEKGMILANASAIGMEPNSDQSPVPKEAL---KAYELVFDAVY-TPRNTRLLREAA 476 (518)
Q Consensus 403 -a-~~la~~~~~~~~~~~~l~~~~~~~~divInatp~g~~~~~~~~~~~~~~l---~~~~~v~Di~Y-~P~~T~ll~~A~ 476 (518)
. +.+|+. ....+|.+ .+..+|++|-.+..|. +.++++ .+..+||=+.- .|+-|| ++|.
T Consensus 233 ~~k~~~a~~-----~~~~~l~~-~i~~~~v~iG~s~~g~--------~~~~~v~~M~~~piifalsNP~~E~~p--~~a~ 296 (752)
T PRK07232 233 EWKAAYAVD-----TDARTLAE-AIEGADVFLGLSAAGV--------LTPEMVKSMADNPIIFALANPDPEITP--EEAK 296 (752)
T ss_pred HHHHHHhcc-----CCCCCHHH-HHcCCCEEEEcCCCCC--------CCHHHHHHhccCCEEEecCCCCccCCH--HHHH
Confidence 1 123332 12234444 4566899997765332 445543 34678887753 243354 4444
Q ss_pred HC--CCeeeccH
Q 010101 477 EV--GATVVSGV 486 (518)
Q Consensus 477 ~~--G~~~i~G~ 486 (518)
+. |+.+..|.
T Consensus 297 ~~~~~~i~atGr 308 (752)
T PRK07232 297 AVRPDAIIATGR 308 (752)
T ss_pred HhcCCEEEEECC
Confidence 44 45555554
No 340
>PLN02253 xanthoxin dehydrogenase
Probab=95.46 E-value=0.036 Score=55.28 Aligned_cols=48 Identities=21% Similarity=0.401 Sum_probs=42.3
Q ss_pred ccCCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHhc
Q 010101 364 PIAGKIFVLVGA-GGAGRALAFGAKSRGARVIIFNRNYERAKALADAVS 411 (518)
Q Consensus 364 ~l~~k~vlvlGa-Gg~araia~~L~~~G~~v~i~nRt~~ka~~la~~~~ 411 (518)
.+++|+++|.|+ ||.|++++..|++.|++|.+++|+.++.+++++.++
T Consensus 15 ~l~~k~~lItGas~gIG~~la~~l~~~G~~v~~~~~~~~~~~~~~~~~~ 63 (280)
T PLN02253 15 RLLGKVALVTGGATGIGESIVRLFHKHGAKVCIVDLQDDLGQNVCDSLG 63 (280)
T ss_pred ccCCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhc
Confidence 467899999987 689999999999999999999999888888877664
No 341
>PRK06483 dihydromonapterin reductase; Provisional
Probab=95.45 E-value=0.042 Score=53.23 Aligned_cols=39 Identities=28% Similarity=0.284 Sum_probs=33.7
Q ss_pred CcEEEEEcc-chhHHHHHHHHHHCCCeEEEEeCCHHHHHH
Q 010101 367 GKIFVLVGA-GGAGRALAFGAKSRGARVIIFNRNYERAKA 405 (518)
Q Consensus 367 ~k~vlvlGa-Gg~araia~~L~~~G~~v~i~nRt~~ka~~ 405 (518)
+|+++|.|+ ||.|++++..|++.|++|.+++|+.++..+
T Consensus 2 ~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~ 41 (236)
T PRK06483 2 PAPILITGAGQRIGLALAWHLLAQGQPVIVSYRTHYPAID 41 (236)
T ss_pred CceEEEECCCChHHHHHHHHHHHCCCeEEEEeCCchhHHH
Confidence 478999997 689999999999999999999998765433
No 342
>TIGR03589 PseB UDP-N-acetylglucosamine 4,6-dehydratase. This enzyme catalyzes the first step in the biosynthesis of pseudaminic acid, the conversion of UDP-N-acetylglucosamine to UDP-4-keto-6-deoxy-N-acetylglucosamine. These sequences are members of the broader pfam01073 (3-beta hydroxysteroid dehydrogenase/isomerase family) family.
Probab=95.44 E-value=0.037 Score=56.87 Aligned_cols=71 Identities=15% Similarity=0.188 Sum_probs=49.7
Q ss_pred CCcEEEEEcc-chhHHHHHHHHHHCC--CeEEEEeCCHHHHHHHHHHhcCc---c--ccccc---ccccCCCCccEEEEc
Q 010101 366 AGKIFVLVGA-GGAGRALAFGAKSRG--ARVIIFNRNYERAKALADAVSGE---A--LHFEY---LHEFFPEKGMILANA 434 (518)
Q Consensus 366 ~~k~vlvlGa-Gg~araia~~L~~~G--~~v~i~nRt~~ka~~la~~~~~~---~--~~~~~---l~~~~~~~~divIna 434 (518)
++++++|.|+ |+.|++++..|.+.| .+|++++|+..+...+.+.+... . .++.+ +.. ...+.|+|||+
T Consensus 3 ~~k~vLVTGatG~IG~~l~~~L~~~g~~~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~l~~-~~~~iD~Vih~ 81 (324)
T TIGR03589 3 NNKSILITGGTGSFGKAFISRLLENYNPKKIIIYSRDELKQWEMQQKFPAPCLRFFIGDVRDKERLTR-ALRGVDYVVHA 81 (324)
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHhCCCcEEEEEcCChhHHHHHHHHhCCCcEEEEEccCCCHHHHHH-HHhcCCEEEEC
Confidence 5789999997 789999999999886 58999999877766665554321 1 12222 222 23458999998
Q ss_pred CCC
Q 010101 435 SAI 437 (518)
Q Consensus 435 tp~ 437 (518)
...
T Consensus 82 Ag~ 84 (324)
T TIGR03589 82 AAL 84 (324)
T ss_pred ccc
Confidence 754
No 343
>PRK09072 short chain dehydrogenase; Provisional
Probab=95.44 E-value=0.039 Score=54.50 Aligned_cols=46 Identities=41% Similarity=0.630 Sum_probs=40.9
Q ss_pred cCCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHh
Q 010101 365 IAGKIFVLVGA-GGAGRALAFGAKSRGARVIIFNRNYERAKALADAV 410 (518)
Q Consensus 365 l~~k~vlvlGa-Gg~araia~~L~~~G~~v~i~nRt~~ka~~la~~~ 410 (518)
+++++++|+|+ ||.|++++..|.+.|++|++++|+.++.+++.+++
T Consensus 3 ~~~~~vlItG~s~~iG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~ 49 (263)
T PRK09072 3 LKDKRVLLTGASGGIGQALAEALAAAGARLLLVGRNAEKLEALAARL 49 (263)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHH
Confidence 45789999996 78999999999999999999999999888887664
No 344
>PRK06079 enoyl-(acyl carrier protein) reductase; Provisional
Probab=95.43 E-value=0.031 Score=55.06 Aligned_cols=46 Identities=28% Similarity=0.338 Sum_probs=37.3
Q ss_pred ccCCcEEEEEccc---hhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHh
Q 010101 364 PIAGKIFVLVGAG---GAGRALAFGAKSRGARVIIFNRNYERAKALADAV 410 (518)
Q Consensus 364 ~l~~k~vlvlGaG---g~araia~~L~~~G~~v~i~nRt~~ka~~la~~~ 410 (518)
.+++|+++|.|++ |+|++++..|++.|++|+++.|+. +.++..+++
T Consensus 4 ~l~~k~~lItGas~~~gIG~a~a~~la~~G~~Vi~~~r~~-~~~~~~~~~ 52 (252)
T PRK06079 4 ILSGKKIVVMGVANKRSIAWGCAQAIKDQGATVIYTYQND-RMKKSLQKL 52 (252)
T ss_pred ccCCCEEEEeCCCCCCchHHHHHHHHHHCCCEEEEecCch-HHHHHHHhh
Confidence 3678999999985 999999999999999999999984 444443433
No 345
>PRK07576 short chain dehydrogenase; Provisional
Probab=95.43 E-value=0.039 Score=54.72 Aligned_cols=47 Identities=30% Similarity=0.405 Sum_probs=41.1
Q ss_pred ccCCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHh
Q 010101 364 PIAGKIFVLVGA-GGAGRALAFGAKSRGARVIIFNRNYERAKALADAV 410 (518)
Q Consensus 364 ~l~~k~vlvlGa-Gg~araia~~L~~~G~~v~i~nRt~~ka~~la~~~ 410 (518)
.+++++++|.|+ ||.|++++..|++.|++|++++|+.++.+++.+.+
T Consensus 6 ~~~~k~ilItGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~ 53 (264)
T PRK07576 6 DFAGKNVVVVGGTSGINLGIAQAFARAGANVAVASRSQEKVDAAVAQL 53 (264)
T ss_pred cCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHH
Confidence 357899999998 78999999999999999999999998877776554
No 346
>PRK07677 short chain dehydrogenase; Provisional
Probab=95.42 E-value=0.035 Score=54.42 Aligned_cols=44 Identities=27% Similarity=0.458 Sum_probs=39.0
Q ss_pred CcEEEEEcc-chhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHh
Q 010101 367 GKIFVLVGA-GGAGRALAFGAKSRGARVIIFNRNYERAKALADAV 410 (518)
Q Consensus 367 ~k~vlvlGa-Gg~araia~~L~~~G~~v~i~nRt~~ka~~la~~~ 410 (518)
+|+++|.|+ ||.|++++..|.+.|++|++++|+.++++++++.+
T Consensus 1 ~k~~lItG~s~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~ 45 (252)
T PRK07677 1 EKVVIITGGSSGMGKAMAKRFAEEGANVVITGRTKEKLEEAKLEI 45 (252)
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHH
Confidence 478999988 57999999999999999999999998888877665
No 347
>PRK07533 enoyl-(acyl carrier protein) reductase; Provisional
Probab=95.42 E-value=0.039 Score=54.51 Aligned_cols=49 Identities=24% Similarity=0.299 Sum_probs=39.8
Q ss_pred cccCCcEEEEEccc---hhHHHHHHHHHHCCCeEEEEeCCHH---HHHHHHHHhc
Q 010101 363 SPIAGKIFVLVGAG---GAGRALAFGAKSRGARVIIFNRNYE---RAKALADAVS 411 (518)
Q Consensus 363 ~~l~~k~vlvlGaG---g~araia~~L~~~G~~v~i~nRt~~---ka~~la~~~~ 411 (518)
.++++|.++|.|++ |.|++++..|++.|++|.++.|+.+ ++++++++++
T Consensus 6 ~~~~~k~~lItGas~g~GIG~a~a~~la~~G~~v~l~~r~~~~~~~~~~~~~~~~ 60 (258)
T PRK07533 6 LPLAGKRGLVVGIANEQSIAWGCARAFRALGAELAVTYLNDKARPYVEPLAEELD 60 (258)
T ss_pred cccCCCEEEEECCCCCCcHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHHHhhc
Confidence 35789999999975 8999999999999999999999854 3455665554
No 348
>PRK06138 short chain dehydrogenase; Provisional
Probab=95.42 E-value=0.037 Score=53.97 Aligned_cols=46 Identities=39% Similarity=0.604 Sum_probs=40.8
Q ss_pred cCCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHh
Q 010101 365 IAGKIFVLVGA-GGAGRALAFGAKSRGARVIIFNRNYERAKALADAV 410 (518)
Q Consensus 365 l~~k~vlvlGa-Gg~araia~~L~~~G~~v~i~nRt~~ka~~la~~~ 410 (518)
+++|+++|.|+ |+.|++++..|.+.|++|+++.|+.++.++..+.+
T Consensus 3 ~~~k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~ 49 (252)
T PRK06138 3 LAGRVAIVTGAGSGIGRATAKLFAREGARVVVADRDAEAAERVAAAI 49 (252)
T ss_pred CCCcEEEEeCCCchHHHHHHHHHHHCCCeEEEecCCHHHHHHHHHHH
Confidence 56889999988 78999999999999999999999998887777665
No 349
>PRK07326 short chain dehydrogenase; Provisional
Probab=95.40 E-value=0.038 Score=53.35 Aligned_cols=47 Identities=26% Similarity=0.404 Sum_probs=41.1
Q ss_pred cCCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHhc
Q 010101 365 IAGKIFVLVGA-GGAGRALAFGAKSRGARVIIFNRNYERAKALADAVS 411 (518)
Q Consensus 365 l~~k~vlvlGa-Gg~araia~~L~~~G~~v~i~nRt~~ka~~la~~~~ 411 (518)
+.+++++|+|+ |+.|++++..|.+.|++|.+++|++++.+++.+.+.
T Consensus 4 ~~~~~ilItGatg~iG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~ 51 (237)
T PRK07326 4 LKGKVALITGGSKGIGFAIAEALLAEGYKVAITARDQKELEEAAAELN 51 (237)
T ss_pred CCCCEEEEECCCCcHHHHHHHHHHHCCCEEEEeeCCHHHHHHHHHHHh
Confidence 34689999997 779999999999999999999999998888877664
No 350
>PRK08945 putative oxoacyl-(acyl carrier protein) reductase; Provisional
Probab=95.40 E-value=0.038 Score=53.97 Aligned_cols=48 Identities=31% Similarity=0.541 Sum_probs=41.9
Q ss_pred ccCCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHhc
Q 010101 364 PIAGKIFVLVGA-GGAGRALAFGAKSRGARVIIFNRNYERAKALADAVS 411 (518)
Q Consensus 364 ~l~~k~vlvlGa-Gg~araia~~L~~~G~~v~i~nRt~~ka~~la~~~~ 411 (518)
.+++++++|.|+ |+.|.+++..|++.|++|++++|+.++++++.+++.
T Consensus 9 ~~~~k~vlItG~~g~iG~~la~~l~~~G~~Vi~~~r~~~~~~~~~~~l~ 57 (247)
T PRK08945 9 LLKDRIILVTGAGDGIGREAALTYARHGATVILLGRTEEKLEAVYDEIE 57 (247)
T ss_pred ccCCCEEEEeCCCchHHHHHHHHHHHCCCcEEEEeCCHHHHHHHHHHHH
Confidence 467899999987 679999999999999999999999998888776653
No 351
>PRK08324 short chain dehydrogenase; Validated
Probab=95.38 E-value=0.032 Score=63.41 Aligned_cols=49 Identities=39% Similarity=0.605 Sum_probs=43.4
Q ss_pred ccCCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHhcC
Q 010101 364 PIAGKIFVLVGA-GGAGRALAFGAKSRGARVIIFNRNYERAKALADAVSG 412 (518)
Q Consensus 364 ~l~~k~vlvlGa-Gg~araia~~L~~~G~~v~i~nRt~~ka~~la~~~~~ 412 (518)
.+.|++++|.|+ ||+|++++..|.+.|++|++++|+.++++++++.++.
T Consensus 419 ~l~gk~vLVTGasggIG~~la~~L~~~Ga~Vvl~~r~~~~~~~~~~~l~~ 468 (681)
T PRK08324 419 PLAGKVALVTGAAGGIGKATAKRLAAEGACVVLADLDEEAAEAAAAELGG 468 (681)
T ss_pred CCCCCEEEEecCCCHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHHhc
Confidence 457899999995 8999999999999999999999999998888877653
No 352
>PRK14620 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Provisional
Probab=95.38 E-value=0.036 Score=57.04 Aligned_cols=41 Identities=24% Similarity=0.399 Sum_probs=37.3
Q ss_pred EEEEEccchhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHH
Q 010101 369 IFVLVGAGGAGRALAFGAKSRGARVIIFNRNYERAKALADA 409 (518)
Q Consensus 369 ~vlvlGaGg~araia~~L~~~G~~v~i~nRt~~ka~~la~~ 409 (518)
++.|+|+|.+|.+++..|++.|.+|++++|+.+.++++.+.
T Consensus 2 kI~IiGaGa~G~ala~~L~~~g~~V~l~~r~~~~~~~i~~~ 42 (326)
T PRK14620 2 KISILGAGSFGTAIAIALSSKKISVNLWGRNHTTFESINTK 42 (326)
T ss_pred EEEEECcCHHHHHHHHHHHHCCCeEEEEecCHHHHHHHHHc
Confidence 58999999999999999999999999999999888887653
No 353
>PRK06935 2-deoxy-D-gluconate 3-dehydrogenase; Provisional
Probab=95.36 E-value=0.036 Score=54.51 Aligned_cols=46 Identities=22% Similarity=0.401 Sum_probs=38.1
Q ss_pred ccCCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHh
Q 010101 364 PIAGKIFVLVGA-GGAGRALAFGAKSRGARVIIFNRNYERAKALADAV 410 (518)
Q Consensus 364 ~l~~k~vlvlGa-Gg~araia~~L~~~G~~v~i~nRt~~ka~~la~~~ 410 (518)
.+++|+++|.|+ ||.|++++..|.+.|++|.++.|+ ++.+++.+.+
T Consensus 12 ~l~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~~~-~~~~~~~~~~ 58 (258)
T PRK06935 12 SLDGKVAIVTGGNTGLGQGYAVALAKAGADIIITTHG-TNWDETRRLI 58 (258)
T ss_pred cCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCC-cHHHHHHHHH
Confidence 467899999998 679999999999999999999998 5555554443
No 354
>PRK05875 short chain dehydrogenase; Provisional
Probab=95.35 E-value=0.042 Score=54.60 Aligned_cols=47 Identities=28% Similarity=0.559 Sum_probs=41.1
Q ss_pred ccCCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHh
Q 010101 364 PIAGKIFVLVGA-GGAGRALAFGAKSRGARVIIFNRNYERAKALADAV 410 (518)
Q Consensus 364 ~l~~k~vlvlGa-Gg~araia~~L~~~G~~v~i~nRt~~ka~~la~~~ 410 (518)
++++++++|.|+ |+.|++++..|.+.|++|++++|+.++.+.+.+.+
T Consensus 4 ~~~~k~vlItGasg~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l 51 (276)
T PRK05875 4 SFQDRTYLVTGGGSGIGKGVAAGLVAAGAAVMIVGRNPDKLAAAAEEI 51 (276)
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHH
Confidence 356899999998 78999999999999999999999988877766554
No 355
>PRK05786 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=95.35 E-value=0.042 Score=53.14 Aligned_cols=46 Identities=33% Similarity=0.510 Sum_probs=40.4
Q ss_pred cCCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHh
Q 010101 365 IAGKIFVLVGA-GGAGRALAFGAKSRGARVIIFNRNYERAKALADAV 410 (518)
Q Consensus 365 l~~k~vlvlGa-Gg~araia~~L~~~G~~v~i~nRt~~ka~~la~~~ 410 (518)
+++++++|.|+ |+.|.+++..|.+.|++|++++|+.++++++.+.+
T Consensus 3 ~~~~~vlItGa~g~iG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~ 49 (238)
T PRK05786 3 LKGKKVAIIGVSEGLGYAVAYFALKEGAQVCINSRNENKLKRMKKTL 49 (238)
T ss_pred cCCcEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHH
Confidence 46789999998 67999999999999999999999999888775554
No 356
>PRK12939 short chain dehydrogenase; Provisional
Probab=95.33 E-value=0.045 Score=53.23 Aligned_cols=46 Identities=35% Similarity=0.406 Sum_probs=41.0
Q ss_pred cCCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHh
Q 010101 365 IAGKIFVLVGA-GGAGRALAFGAKSRGARVIIFNRNYERAKALADAV 410 (518)
Q Consensus 365 l~~k~vlvlGa-Gg~araia~~L~~~G~~v~i~nRt~~ka~~la~~~ 410 (518)
+++++++|+|+ |+.|++++..|.+.|++|.+++|+.++++.+.+.+
T Consensus 5 ~~~~~vlItGa~g~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~ 51 (250)
T PRK12939 5 LAGKRALVTGAARGLGAAFAEALAEAGATVAFNDGLAAEARELAAAL 51 (250)
T ss_pred CCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHH
Confidence 56899999997 78999999999999999999999999888877665
No 357
>PRK07454 short chain dehydrogenase; Provisional
Probab=95.32 E-value=0.042 Score=53.34 Aligned_cols=45 Identities=24% Similarity=0.348 Sum_probs=39.7
Q ss_pred CCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHh
Q 010101 366 AGKIFVLVGA-GGAGRALAFGAKSRGARVIIFNRNYERAKALADAV 410 (518)
Q Consensus 366 ~~k~vlvlGa-Gg~araia~~L~~~G~~v~i~nRt~~ka~~la~~~ 410 (518)
++|+++|.|+ |+.|++++..|.+.|++|++++|+.++.+++.+.+
T Consensus 5 ~~k~vlItG~sg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~ 50 (241)
T PRK07454 5 SMPRALITGASSGIGKATALAFAKAGWDLALVARSQDALEALAAEL 50 (241)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHH
Confidence 3578999987 88999999999999999999999999888776654
No 358
>PRK14806 bifunctional cyclohexadienyl dehydrogenase/ 3-phosphoshikimate 1-carboxyvinyltransferase; Provisional
Probab=95.32 E-value=0.039 Score=63.29 Aligned_cols=114 Identities=19% Similarity=0.156 Sum_probs=72.9
Q ss_pred cEEEEEccchhHHHHHHHHHHCCC--eEEEEeCCHHHHHHHHHHhcCcccccccccccCCCCccEEEEcCCCCCCCCCCC
Q 010101 368 KIFVLVGAGGAGRALAFGAKSRGA--RVIIFNRNYERAKALADAVSGEALHFEYLHEFFPEKGMILANASAIGMEPNSDQ 445 (518)
Q Consensus 368 k~vlvlGaGg~araia~~L~~~G~--~v~i~nRt~~ka~~la~~~~~~~~~~~~l~~~~~~~~divInatp~g~~~~~~~ 445 (518)
+++.|||+|.+|.+++..|.+.|. +|++++|+.++++.. .+.+.......++.+ .+.++|+||.|+|......
T Consensus 4 ~~I~IIG~G~mG~ala~~l~~~G~~~~V~~~d~~~~~~~~a-~~~g~~~~~~~~~~~-~~~~aDvVilavp~~~~~~--- 78 (735)
T PRK14806 4 GRVVVIGLGLIGGSFAKALRERGLAREVVAVDRRAKSLELA-VSLGVIDRGEEDLAE-AVSGADVIVLAVPVLAMEK--- 78 (735)
T ss_pred cEEEEEeeCHHHHHHHHHHHhcCCCCEEEEEECChhHHHHH-HHCCCCCcccCCHHH-HhcCCCEEEECCCHHHHHH---
Confidence 679999999999999999999983 899999999887654 344432111222322 3467899999998642111
Q ss_pred CCCC--hhhhcCCCEEEEEeeCCCchHHHHHHHH----CCCeeeccHHHH
Q 010101 446 SPVP--KEALKAYELVFDAVYTPRNTRLLREAAE----VGATVVSGVEMF 489 (518)
Q Consensus 446 ~~~~--~~~l~~~~~v~Di~Y~P~~T~ll~~A~~----~G~~~i~G~~ml 489 (518)
.+. ...++++.++.|+.-.+. ..++..++ .+.+++++..|.
T Consensus 79 -vl~~l~~~~~~~~ii~d~~svk~--~~~~~l~~~~~~~~~r~~~~hPm~ 125 (735)
T PRK14806 79 -VLADLKPLLSEHAIVTDVGSTKG--NVVDAARAVFGELPAGFVPGHPIA 125 (735)
T ss_pred -HHHHHHHhcCCCcEEEEcCCCch--HHHHHHHHhccccCCeEEecCCcC
Confidence 011 112456778989976532 22333332 245677777765
No 359
>PRK12828 short chain dehydrogenase; Provisional
Probab=95.28 E-value=0.042 Score=52.86 Aligned_cols=46 Identities=35% Similarity=0.524 Sum_probs=39.2
Q ss_pred cCCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHh
Q 010101 365 IAGKIFVLVGA-GGAGRALAFGAKSRGARVIIFNRNYERAKALADAV 410 (518)
Q Consensus 365 l~~k~vlvlGa-Gg~araia~~L~~~G~~v~i~nRt~~ka~~la~~~ 410 (518)
+++|+++|+|+ |+.|++++..|.+.|++|.+++|+.++..+..+.+
T Consensus 5 ~~~k~vlItGatg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~ 51 (239)
T PRK12828 5 LQGKVVAITGGFGGLGRATAAWLAARGARVALIGRGAAPLSQTLPGV 51 (239)
T ss_pred CCCCEEEEECCCCcHhHHHHHHHHHCCCeEEEEeCChHhHHHHHHHH
Confidence 56899999998 78999999999999999999999988766655443
No 360
>PRK08643 acetoin reductase; Validated
Probab=95.28 E-value=0.042 Score=53.87 Aligned_cols=45 Identities=38% Similarity=0.445 Sum_probs=39.6
Q ss_pred CcEEEEEcc-chhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHhc
Q 010101 367 GKIFVLVGA-GGAGRALAFGAKSRGARVIIFNRNYERAKALADAVS 411 (518)
Q Consensus 367 ~k~vlvlGa-Gg~araia~~L~~~G~~v~i~nRt~~ka~~la~~~~ 411 (518)
+|+++|+|+ ||.|++++..|.+.|++|.+++|+.++.+++++.+.
T Consensus 2 ~k~~lItGas~giG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~ 47 (256)
T PRK08643 2 SKVALVTGAGQGIGFAIAKRLVEDGFKVAIVDYNEETAQAAADKLS 47 (256)
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHH
Confidence 578999987 689999999999999999999999988888776653
No 361
>PRK05808 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=95.24 E-value=0.039 Score=55.59 Aligned_cols=37 Identities=19% Similarity=0.291 Sum_probs=34.5
Q ss_pred cEEEEEccchhHHHHHHHHHHCCCeEEEEeCCHHHHH
Q 010101 368 KIFVLVGAGGAGRALAFGAKSRGARVIIFNRNYERAK 404 (518)
Q Consensus 368 k~vlvlGaGg~araia~~L~~~G~~v~i~nRt~~ka~ 404 (518)
+++.|||+|-||.+++..++..|++|+++++++++++
T Consensus 4 ~kI~VIG~G~mG~~ia~~la~~g~~V~~~d~~~~~~~ 40 (282)
T PRK05808 4 QKIGVIGAGTMGNGIAQVCAVAGYDVVMVDISDAAVD 40 (282)
T ss_pred cEEEEEccCHHHHHHHHHHHHCCCceEEEeCCHHHHH
Confidence 4799999999999999999999999999999998875
No 362
>PRK08416 7-alpha-hydroxysteroid dehydrogenase; Provisional
Probab=95.24 E-value=0.044 Score=54.08 Aligned_cols=47 Identities=26% Similarity=0.508 Sum_probs=38.8
Q ss_pred ccCCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEe-CCHHHHHHHHHHh
Q 010101 364 PIAGKIFVLVGA-GGAGRALAFGAKSRGARVIIFN-RNYERAKALADAV 410 (518)
Q Consensus 364 ~l~~k~vlvlGa-Gg~araia~~L~~~G~~v~i~n-Rt~~ka~~la~~~ 410 (518)
.+++|+++|.|+ +|.|++++..|.+.|++|+++. |+.++++++++.+
T Consensus 5 ~l~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~ 53 (260)
T PRK08416 5 EMKGKTLVISGGTRGIGKAIVYEFAQSGVNIAFTYNSNVEEANKIAEDL 53 (260)
T ss_pred ccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHH
Confidence 467899999998 6899999999999999988875 5677777666554
No 363
>PRK05562 precorrin-2 dehydrogenase; Provisional
Probab=95.23 E-value=0.047 Score=53.01 Aligned_cols=71 Identities=14% Similarity=0.139 Sum_probs=47.3
Q ss_pred cccCCcEEEEEccchhHHHHHHHHHHCCCeEEEEeCCHH-HHHHHHHHhcCcccccc--cccccCCCCccEEEEcCC
Q 010101 363 SPIAGKIFVLVGAGGAGRALAFGAKSRGARVIIFNRNYE-RAKALADAVSGEALHFE--YLHEFFPEKGMILANASA 436 (518)
Q Consensus 363 ~~l~~k~vlvlGaGg~araia~~L~~~G~~v~i~nRt~~-ka~~la~~~~~~~~~~~--~l~~~~~~~~divInatp 436 (518)
..+++++|||+|+|.+|..=+..|.+.|++|+|++.+.. ..+++++.-. +.|. +.....+.++++||-||.
T Consensus 21 l~~~~~~VLVVGGG~VA~RK~~~Ll~~gA~VtVVap~i~~el~~l~~~~~---i~~~~r~~~~~dl~g~~LViaATd 94 (223)
T PRK05562 21 LLSNKIKVLIIGGGKAAFIKGKTFLKKGCYVYILSKKFSKEFLDLKKYGN---LKLIKGNYDKEFIKDKHLIVIATD 94 (223)
T ss_pred EECCCCEEEEECCCHHHHHHHHHHHhCCCEEEEEcCCCCHHHHHHHhCCC---EEEEeCCCChHHhCCCcEEEECCC
Confidence 456789999999999998888899999999999998753 3444543211 1111 111102345677887774
No 364
>PRK07666 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=95.23 E-value=0.051 Score=52.69 Aligned_cols=46 Identities=37% Similarity=0.548 Sum_probs=40.2
Q ss_pred cCCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHh
Q 010101 365 IAGKIFVLVGA-GGAGRALAFGAKSRGARVIIFNRNYERAKALADAV 410 (518)
Q Consensus 365 l~~k~vlvlGa-Gg~araia~~L~~~G~~v~i~nRt~~ka~~la~~~ 410 (518)
+++++++|.|+ |+.|++++..|.+.|++|.+++|+.++.+++++++
T Consensus 5 ~~~~~vlVtG~sg~iG~~l~~~L~~~G~~Vi~~~r~~~~~~~~~~~~ 51 (239)
T PRK07666 5 LQGKNALITGAGRGIGRAVAIALAKEGVNVGLLARTEENLKAVAEEV 51 (239)
T ss_pred CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHH
Confidence 45789999987 68999999999999999999999998887776655
No 365
>PRK09496 trkA potassium transporter peripheral membrane component; Reviewed
Probab=95.22 E-value=0.062 Score=57.69 Aligned_cols=72 Identities=25% Similarity=0.236 Sum_probs=55.5
Q ss_pred cCCcEEEEEccchhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHh-cCcc-----cccccccccCCCCccEEEEcCC
Q 010101 365 IAGKIFVLVGAGGAGRALAFGAKSRGARVIIFNRNYERAKALADAV-SGEA-----LHFEYLHEFFPEKGMILANASA 436 (518)
Q Consensus 365 l~~k~vlvlGaGg~araia~~L~~~G~~v~i~nRt~~ka~~la~~~-~~~~-----~~~~~l~~~~~~~~divInatp 436 (518)
...++++|+|+|..|+.++..|.+.|.+|+++++++++.+++.+.+ +... ...+.|.+....++|.+|.+++
T Consensus 229 ~~~~~iiIiG~G~~g~~l~~~L~~~~~~v~vid~~~~~~~~~~~~~~~~~~i~gd~~~~~~L~~~~~~~a~~vi~~~~ 306 (453)
T PRK09496 229 KPVKRVMIVGGGNIGYYLAKLLEKEGYSVKLIERDPERAEELAEELPNTLVLHGDGTDQELLEEEGIDEADAFIALTN 306 (453)
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHHCCCCeEEECCCCCHHHHHhcCCccCCEEEECCC
Confidence 4568999999999999999999999999999999999998887764 2221 1222233334678899998776
No 366
>PRK05993 short chain dehydrogenase; Provisional
Probab=95.22 E-value=0.041 Score=54.95 Aligned_cols=42 Identities=29% Similarity=0.336 Sum_probs=38.2
Q ss_pred CcEEEEEcc-chhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHH
Q 010101 367 GKIFVLVGA-GGAGRALAFGAKSRGARVIIFNRNYERAKALAD 408 (518)
Q Consensus 367 ~k~vlvlGa-Gg~araia~~L~~~G~~v~i~nRt~~ka~~la~ 408 (518)
+++++|.|+ ||.|++++..|.+.|++|++++|+.++.+++.+
T Consensus 4 ~k~vlItGasggiG~~la~~l~~~G~~Vi~~~r~~~~~~~l~~ 46 (277)
T PRK05993 4 KRSILITGCSSGIGAYCARALQSDGWRVFATCRKEEDVAALEA 46 (277)
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHH
Confidence 578999998 889999999999999999999999998877754
No 367
>PRK09287 6-phosphogluconate dehydrogenase; Validated
Probab=95.21 E-value=0.017 Score=62.32 Aligned_cols=102 Identities=22% Similarity=0.230 Sum_probs=65.9
Q ss_pred hHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHhc----Cc-ccccccccccCCCCccEEEEcCCCCCCCCCCCCCCC--h
Q 010101 378 AGRALAFGAKSRGARVIIFNRNYERAKALADAVS----GE-ALHFEYLHEFFPEKGMILANASAIGMEPNSDQSPVP--K 450 (518)
Q Consensus 378 ~araia~~L~~~G~~v~i~nRt~~ka~~la~~~~----~~-~~~~~~l~~~~~~~~divInatp~g~~~~~~~~~~~--~ 450 (518)
||+.++..|.+.|++|+++|||+++++++++..+ .. ..+++++.+ .+..+++||-+.|.|-. ++.. +. .
T Consensus 1 MG~~mA~nL~~~G~~V~v~nrt~~~~~~l~~~~g~~~g~~~~~s~~e~v~-~l~~~~~Ii~mv~~g~~--v~~V-i~~l~ 76 (459)
T PRK09287 1 MGKNLALNIASHGYTVAVYNRTPEKTDEFLAEEGKGKKIVPAYTLEEFVA-SLEKPRKILLMVKAGAP--VDAV-IEQLL 76 (459)
T ss_pred CcHHHHHHHHhCCCeEEEECCCHHHHHHHHHhhCCCCCeEeeCCHHHHHh-hCCCCCEEEEECCCchH--HHHH-HHHHH
Confidence 6889999999999999999999999999987533 11 113333322 23457999987776521 1111 11 1
Q ss_pred hhhcCCCEEEEEee-CCCchH-HHHHHHHCCCeee
Q 010101 451 EALKAYELVFDAVY-TPRNTR-LLREAAEVGATVV 483 (518)
Q Consensus 451 ~~l~~~~~v~Di~Y-~P~~T~-ll~~A~~~G~~~i 483 (518)
..+.++.+++|..- .|..|. ..++++++|+.++
T Consensus 77 ~~l~~GdiiID~gn~~~~~t~~~~~~l~~~Gi~fv 111 (459)
T PRK09287 77 PLLEKGDIIIDGGNSNYKDTIRREKELAEKGIHFI 111 (459)
T ss_pred hcCCCCCEEEECCCCCHHHHHHHHHHHHhcCCeEE
Confidence 22567889999974 455554 3345567776543
No 368
>PRK15057 UDP-glucose 6-dehydrogenase; Provisional
Probab=95.20 E-value=0.1 Score=55.09 Aligned_cols=99 Identities=17% Similarity=0.233 Sum_probs=62.1
Q ss_pred EEEEEccchhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHhcC------------cccccc---cccccCCCCccEEEE
Q 010101 369 IFVLVGAGGAGRALAFGAKSRGARVIIFNRNYERAKALADAVSG------------EALHFE---YLHEFFPEKGMILAN 433 (518)
Q Consensus 369 ~vlvlGaGg~araia~~L~~~G~~v~i~nRt~~ka~~la~~~~~------------~~~~~~---~l~~~~~~~~divIn 433 (518)
+|.|+|+|-+|..++..++. |++|+.++++.++.+++.+.... ....+. +..+ ...++|++|-
T Consensus 2 kI~VIGlGyvGl~~A~~lA~-G~~VigvD~d~~kv~~l~~g~~~~~e~~l~~~l~~~~~~l~~t~~~~~-~~~~ad~vii 79 (388)
T PRK15057 2 KITISGTGYVGLSNGLLIAQ-NHEVVALDILPSRVAMLNDRISPIVDKEIQQFLQSDKIHFNATLDKNE-AYRDADYVII 79 (388)
T ss_pred EEEEECCCHHHHHHHHHHHh-CCcEEEEECCHHHHHHHHcCCCCCCCcCHHHHHHhCCCcEEEecchhh-hhcCCCEEEE
Confidence 58899999999999977764 89999999999999888653211 000111 1111 2467899999
Q ss_pred cCCCCCCCCCCC---CCCCh-----hhhcCCCEEEEEeeCCCch
Q 010101 434 ASAIGMEPNSDQ---SPVPK-----EALKAYELVFDAVYTPRNT 469 (518)
Q Consensus 434 atp~g~~~~~~~---~~~~~-----~~l~~~~~v~Di~Y~P~~T 469 (518)
|+|-........ ..+.. ..++++.+|++.+.-|..|
T Consensus 80 ~Vpt~~~~k~~~~dl~~v~~v~~~i~~~~~g~lVV~~STv~pgt 123 (388)
T PRK15057 80 ATPTDYDPKTNYFNTSSVESVIKDVVEINPYAVMVIKSTVPVGF 123 (388)
T ss_pred eCCCCCccCCCCcChHHHHHHHHHHHhcCCCCEEEEeeecCCch
Confidence 987543211000 00100 0135678888888876543
No 369
>COG0499 SAM1 S-adenosylhomocysteine hydrolase [Coenzyme metabolism]
Probab=95.19 E-value=0.04 Score=56.35 Aligned_cols=69 Identities=30% Similarity=0.346 Sum_probs=53.6
Q ss_pred cccCCcEEEEEccchhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHhcCcccccccccccCCCCccEEEEcCC
Q 010101 363 SPIAGKIFVLVGAGGAGRALAFGAKSRGARVIIFNRNYERAKALADAVSGEALHFEYLHEFFPEKGMILANASA 436 (518)
Q Consensus 363 ~~l~~k~vlvlGaGg~araia~~L~~~G~~v~i~nRt~~ka~~la~~~~~~~~~~~~l~~~~~~~~divInatp 436 (518)
.-+.||+++|.|.|-+||.++..|...|++|.|+.-++-+|-+.+= -|.+..+.++ ....+|++|-||.
T Consensus 205 ~liaGK~vVV~GYG~vGrG~A~~~rg~GA~ViVtEvDPI~AleA~M-dGf~V~~m~~----Aa~~gDifiT~TG 273 (420)
T COG0499 205 VLLAGKNVVVAGYGWVGRGIAMRLRGMGARVIVTEVDPIRALEAAM-DGFRVMTMEE----AAKTGDIFVTATG 273 (420)
T ss_pred eeecCceEEEecccccchHHHHHhhcCCCeEEEEecCchHHHHHhh-cCcEEEEhHH----hhhcCCEEEEccC
Confidence 5678999999999999999999999999999999999988755331 1334444443 3456799997773
No 370
>PRK03806 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=95.18 E-value=0.11 Score=55.76 Aligned_cols=36 Identities=22% Similarity=0.263 Sum_probs=32.0
Q ss_pred cCCcEEEEEccchhHHHHHHHHHHCCCeEEEEeCCH
Q 010101 365 IAGKIFVLVGAGGAGRALAFGAKSRGARVIIFNRNY 400 (518)
Q Consensus 365 l~~k~vlvlGaGg~araia~~L~~~G~~v~i~nRt~ 400 (518)
+.+++++|+|.|+.|++++..|.+.|++|++++...
T Consensus 4 ~~~~~i~v~G~G~sG~s~~~~l~~~G~~v~~~D~~~ 39 (438)
T PRK03806 4 YQGKKVVIIGLGLTGLSCVDFFLARGVTPRVIDTRI 39 (438)
T ss_pred cCCCEEEEEeeCHHHHHHHHHHHHCCCeEEEEcCCC
Confidence 347899999999999999999999999999999753
No 371
>PRK08594 enoyl-(acyl carrier protein) reductase; Provisional
Probab=95.18 E-value=0.042 Score=54.34 Aligned_cols=47 Identities=21% Similarity=0.427 Sum_probs=39.3
Q ss_pred ccCCcEEEEEcc---chhHHHHHHHHHHCCCeEEEEeCC---HHHHHHHHHHh
Q 010101 364 PIAGKIFVLVGA---GGAGRALAFGAKSRGARVIIFNRN---YERAKALADAV 410 (518)
Q Consensus 364 ~l~~k~vlvlGa---Gg~araia~~L~~~G~~v~i~nRt---~~ka~~la~~~ 410 (518)
.+++|.++|.|+ +|.|++++..|++.|++|++++|+ .++.+++++++
T Consensus 4 ~~~~k~~lItGa~~s~GIG~aia~~la~~G~~v~~~~r~~~~~~~~~~~~~~~ 56 (257)
T PRK08594 4 SLEGKTYVVMGVANKRSIAWGIARSLHNAGAKLVFTYAGERLEKEVRELADTL 56 (257)
T ss_pred ccCCCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEecCcccchHHHHHHHHHc
Confidence 356899999998 599999999999999999998765 45667777766
No 372
>TIGR03206 benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate.
Probab=95.18 E-value=0.05 Score=52.97 Aligned_cols=45 Identities=31% Similarity=0.479 Sum_probs=39.7
Q ss_pred CCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHh
Q 010101 366 AGKIFVLVGA-GGAGRALAFGAKSRGARVIIFNRNYERAKALADAV 410 (518)
Q Consensus 366 ~~k~vlvlGa-Gg~araia~~L~~~G~~v~i~nRt~~ka~~la~~~ 410 (518)
++++++|.|+ |+.|++++..|.+.|++|++++|+.++.+++.+.+
T Consensus 2 ~~~~ilItGas~~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~ 47 (250)
T TIGR03206 2 KDKTAIVTGGGGGIGGATCRRFAEEGAKVAVFDLNREAAEKVAADI 47 (250)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHH
Confidence 5789999997 78999999999999999999999999888776554
No 373
>PRK06113 7-alpha-hydroxysteroid dehydrogenase; Validated
Probab=95.15 E-value=0.057 Score=53.01 Aligned_cols=48 Identities=27% Similarity=0.493 Sum_probs=41.9
Q ss_pred cccCCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHh
Q 010101 363 SPIAGKIFVLVGA-GGAGRALAFGAKSRGARVIIFNRNYERAKALADAV 410 (518)
Q Consensus 363 ~~l~~k~vlvlGa-Gg~araia~~L~~~G~~v~i~nRt~~ka~~la~~~ 410 (518)
..+++|+++|+|+ ||.|++++..|.+.|++|.+++|+.++.+++++++
T Consensus 7 ~~l~~k~vlVtG~s~gIG~~la~~l~~~G~~vv~~~r~~~~~~~~~~~l 55 (255)
T PRK06113 7 LRLDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEI 55 (255)
T ss_pred cCcCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHH
Confidence 3467899999987 68999999999999999999999999888877655
No 374
>PRK08213 gluconate 5-dehydrogenase; Provisional
Probab=95.15 E-value=0.054 Score=53.26 Aligned_cols=47 Identities=28% Similarity=0.410 Sum_probs=41.3
Q ss_pred ccCCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHh
Q 010101 364 PIAGKIFVLVGA-GGAGRALAFGAKSRGARVIIFNRNYERAKALADAV 410 (518)
Q Consensus 364 ~l~~k~vlvlGa-Gg~araia~~L~~~G~~v~i~nRt~~ka~~la~~~ 410 (518)
.+++++++|.|+ |+.|++++..|.+.|++|+++.|+.++.+.+.+.+
T Consensus 9 ~~~~k~ilItGa~g~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~i 56 (259)
T PRK08213 9 DLSGKTALVTGGSRGLGLQIAEALGEAGARVVLSARKAEELEEAAAHL 56 (259)
T ss_pred CcCCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHH
Confidence 467899999986 78999999999999999999999998887776554
No 375
>PRK08251 short chain dehydrogenase; Provisional
Probab=95.14 E-value=0.053 Score=52.83 Aligned_cols=44 Identities=20% Similarity=0.392 Sum_probs=38.8
Q ss_pred CcEEEEEcc-chhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHh
Q 010101 367 GKIFVLVGA-GGAGRALAFGAKSRGARVIIFNRNYERAKALADAV 410 (518)
Q Consensus 367 ~k~vlvlGa-Gg~araia~~L~~~G~~v~i~nRt~~ka~~la~~~ 410 (518)
+++++|.|+ ||.|++++..|.+.|++|.++.|+.++.+++.+.+
T Consensus 2 ~k~vlItGas~giG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~ 46 (248)
T PRK08251 2 RQKILITGASSGLGAGMAREFAAKGRDLALCARRTDRLEELKAEL 46 (248)
T ss_pred CCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHH
Confidence 578999986 78999999999999999999999999888776554
No 376
>cd07937 DRE_TIM_PC_TC_5S Pyruvate carboxylase and Transcarboxylase 5S, carboxyltransferase domain. This family includes the carboxyltransferase domains of pyruvate carboxylase (PC) and the transcarboxylase (TC) 5S subunit. Transcarboxylase 5S is a cobalt-dependent metalloenzyme subunit of the biotin-dependent transcarboxylase multienzyme complex. Transcarboxylase 5S transfers carbon dioxide from the 1.3S biotin to pyruvate in the second of two carboxylation reactions catalyzed by TC. The first reaction involves the transfer of carbon dioxide from methylmalonyl-CoA to the 1.3S biotin, and is catalyzed by the 12S subunit. These two steps allow a carboxylate group to be transferred from oxaloacetate to propionyl-CoA to yield pyruvate and methylmalonyl-CoA. The catalytic domain of transcarboxylase 5S has a canonical TIM-barrel fold with a large C-terminal extension that forms a funnel leading to the active site. Transcarboxylase 5S forms a homodimer and there are six dimers per complex
Probab=95.13 E-value=1.9 Score=43.34 Aligned_cols=200 Identities=12% Similarity=0.076 Sum_probs=120.2
Q ss_pred HHHHHhhCCCEEEEEecc--------CCCCcHHHHHHHhcC-CCCcEEEEeecCCCCCCCCCCcHHHHHHHHHHHhhcCC
Q 010101 27 IEQAKVEGADLVELCIDS--------MEFSHISEVDKLIQH-PTLPAIVSYRLKSSRKSSDEACKNTCLQVLRRALDLDV 97 (518)
Q Consensus 27 ~~~~~~~g~D~vElRlD~--------l~~~~~~~l~~l~~~-~~~PiI~T~R~~~eGG~~~~~~~~~~~~ll~~~~~~g~ 97 (518)
+....+.|.|.||.=.-. ...++.+.++.+++. .+.++..-.|....=|..+.. .+-..+.++.+.+.|+
T Consensus 27 a~~L~~~Gv~~iE~G~~a~~~~~~~~~~~~~~e~i~~~~~~~~~~~l~~~~r~~~~~~~~~~p-~~~~~~di~~~~~~g~ 105 (275)
T cd07937 27 AEALDEAGFFSLEVWGGATFDVCMRFLNEDPWERLRELRKAMPNTPLQMLLRGQNLVGYRHYP-DDVVELFVEKAAKNGI 105 (275)
T ss_pred HHHHHHcCCCEEEccCCcchhhhccccCCCHHHHHHHHHHhCCCCceehhcccccccCccCCC-cHHHHHHHHHHHHcCC
Confidence 344445799999987432 123444566666653 467888888865544443333 4567778889999999
Q ss_pred cEEEEecCCCC-chhhHHHh-hcCCCcEEEEeeecCCCCCCChhHHHHHHHHHHHcCCCEEEEEcccC--CcccHHHHHH
Q 010101 98 EFVEMDYEVAS-DPLMSEII-YSRSNTKIIVSSYLNGGGKPTTEKLGDVIACMQATGADVMKLEIAVD--SITDLAPVFE 173 (518)
Q Consensus 98 ~yvDiEl~~~~-~~~~~l~~-~~~~~~kiI~S~H~f~~~tp~~~~l~~~~~~~~~~gadivKia~~~~--~~~D~~~l~~ 173 (518)
++|-|-....+ +......+ ++..+.++..+.........+.+.+.+..+++.+.|+|.+-++=|.- ++.++.++.+
T Consensus 106 ~~iri~~~~~~~~~~~~~i~~ak~~G~~v~~~i~~~~~~~~~~~~~~~~~~~~~~~Ga~~i~l~DT~G~~~P~~v~~lv~ 185 (275)
T cd07937 106 DIFRIFDALNDVRNLEVAIKAVKKAGKHVEGAICYTGSPVHTLEYYVKLAKELEDMGADSICIKDMAGLLTPYAAYELVK 185 (275)
T ss_pred CEEEEeecCChHHHHHHHHHHHHHCCCeEEEEEEecCCCCCCHHHHHHHHHHHHHcCCCEEEEcCCCCCCCHHHHHHHHH
Confidence 99888554332 22222223 45566677665543202233677899999999999999999886664 5778888877
Q ss_pred HhccC-CCCEEE-----EecCCccchhhhcCCCCCCcccccccCC-CCCCCCCCHHHHHHHhhh
Q 010101 174 MLTHC-QVPLIA-----LAVGSRGLISQLLGPKFGGFLVYGSLGG-KSVPGLPTLVSLKQVYQL 230 (518)
Q Consensus 174 ~~~~~-~~p~i~-----~~mG~~G~~sRi~~~~~gs~~ty~~~~~-~sApGQ~~~~~l~~~~~~ 230 (518)
.+.+. +.|+-. ++|+. ..-+.+-..|....-+++.+ +.-.|+.+++++...++.
T Consensus 186 ~l~~~~~~~l~~H~Hnd~GlA~---aN~laA~~aGa~~vd~sv~GlG~~aGN~~~E~l~~~L~~ 246 (275)
T cd07937 186 ALKKEVGLPIHLHTHDTSGLAV---ATYLAAAEAGVDIVDTAISPLSGGTSQPSTESMVAALRG 246 (275)
T ss_pred HHHHhCCCeEEEEecCCCChHH---HHHHHHHHhCCCEEEEecccccCCcCChhHHHHHHHHHc
Confidence 75542 333321 11222 22222222355444454433 244889998888766543
No 377
>PRK14031 glutamate dehydrogenase; Provisional
Probab=95.13 E-value=0.19 Score=53.75 Aligned_cols=130 Identities=16% Similarity=0.207 Sum_probs=77.3
Q ss_pred CHHHHHHHHHHHHHhhccCCCCCCCCcccCCcEEEEEccchhHHHHHHHHHHCCCeEEE-Ee----------CCHHHHH-
Q 010101 337 DCESAISAIEDALRERQGINGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGARVII-FN----------RNYERAK- 404 (518)
Q Consensus 337 D~~G~~~~l~~~l~~~~~~~~~~~~~~~l~~k~vlvlGaGg~araia~~L~~~G~~v~i-~n----------Rt~~ka~- 404 (518)
-+.|...+++..++.. | .+++|++|+|.|.|-+|..++..|.+.|++|+. .+ -+.++..
T Consensus 207 Tg~Gv~~~~~~~~~~~-g--------~~l~g~rVaVQGfGNVG~~aA~~L~e~GAkVVaVSD~~G~iy~~~Gld~~~l~~ 277 (444)
T PRK14031 207 TGYGNIYFLMEMLKTK-G--------TDLKGKVCLVSGSGNVAQYTAEKVLELGGKVVTMSDSDGYIYDPDGIDREKLDY 277 (444)
T ss_pred cHHHHHHHHHHHHHhc-C--------CCcCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCeEECCCCCCHHHHHH
Confidence 3778888887766543 3 578999999999999999999999999998775 44 3444332
Q ss_pred --HHHHHhc-----------CcccccccccccCCCCccEEEEcCCCCCCCCCCCCCCChh---hhcCC--CEEEEEeeCC
Q 010101 405 --ALADAVS-----------GEALHFEYLHEFFPEKGMILANASAIGMEPNSDQSPVPKE---ALKAY--ELVFDAVYTP 466 (518)
Q Consensus 405 --~la~~~~-----------~~~~~~~~l~~~~~~~~divInatp~g~~~~~~~~~~~~~---~l~~~--~~v~Di~Y~P 466 (518)
++....+ ...++-+++ ....+|++|-|.--+ .+..+ .++.. .+|..-.-+|
T Consensus 278 ~~~~k~~~~~~v~~~~~~~ga~~i~~d~~---~~~~cDIliPaAl~n--------~I~~~na~~l~a~g~~~V~EgAN~P 346 (444)
T PRK14031 278 IMELKNLYRGRIREYAEKYGCKYVEGARP---WGEKGDIALPSATQN--------ELNGDDARQLVANGVIAVSEGANMP 346 (444)
T ss_pred HHHHHhhcCCchhhhHhhcCCEEcCCccc---ccCCCcEEeeccccc--------ccCHHHHHHHHhcCCeEEECCCCCC
Confidence 1111111 111111111 124588888554321 13322 23332 4777877777
Q ss_pred CchHHHHHHHHCCCeeeccH
Q 010101 467 RNTRLLREAAEVGATVVSGV 486 (518)
Q Consensus 467 ~~T~ll~~A~~~G~~~i~G~ 486 (518)
....-.+.-+++|+.+++..
T Consensus 347 ~t~eA~~~L~~rgI~~~PD~ 366 (444)
T PRK14031 347 STPEAIKVFQDAKILYAPGK 366 (444)
T ss_pred CCHHHHHHHHHCCcEEeChh
Confidence 54444444466777665543
No 378
>PRK08263 short chain dehydrogenase; Provisional
Probab=95.12 E-value=0.099 Score=52.04 Aligned_cols=72 Identities=26% Similarity=0.338 Sum_probs=51.2
Q ss_pred CcEEEEEcc-chhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHhcCcc----ccccc---cccc------CCCCccEEE
Q 010101 367 GKIFVLVGA-GGAGRALAFGAKSRGARVIIFNRNYERAKALADAVSGEA----LHFEY---LHEF------FPEKGMILA 432 (518)
Q Consensus 367 ~k~vlvlGa-Gg~araia~~L~~~G~~v~i~nRt~~ka~~la~~~~~~~----~~~~~---l~~~------~~~~~divI 432 (518)
+++++|.|+ ||.|++++..|.+.|++|+++.|+.++.+++.+.++... .++.+ +... .....|++|
T Consensus 3 ~k~vlItGasg~iG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~vi 82 (275)
T PRK08263 3 EKVWFITGASRGFGRAWTEAALERGDRVVATARDTATLADLAEKYGDRLLPLALDVTDRAAVFAAVETAVEHFGRLDIVV 82 (275)
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHhccCCeeEEEccCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence 578999987 789999999999999999999999998887776654221 11111 1100 123579999
Q ss_pred EcCCCC
Q 010101 433 NASAIG 438 (518)
Q Consensus 433 natp~g 438 (518)
++....
T Consensus 83 ~~ag~~ 88 (275)
T PRK08263 83 NNAGYG 88 (275)
T ss_pred ECCCCc
Confidence 987653
No 379
>PRK12826 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed
Probab=95.10 E-value=0.052 Score=52.71 Aligned_cols=46 Identities=35% Similarity=0.539 Sum_probs=39.5
Q ss_pred cCCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHh
Q 010101 365 IAGKIFVLVGA-GGAGRALAFGAKSRGARVIIFNRNYERAKALADAV 410 (518)
Q Consensus 365 l~~k~vlvlGa-Gg~araia~~L~~~G~~v~i~nRt~~ka~~la~~~ 410 (518)
+.+++++|.|+ |+.|++++..|.+.|++|+++.|+.++...+++.+
T Consensus 4 ~~~~~ilItGasg~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~l 50 (251)
T PRK12826 4 LEGRVALVTGAARGIGRAIAVRLAADGAEVIVVDICGDDAAATAELV 50 (251)
T ss_pred CCCCEEEEcCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHH
Confidence 45789999996 78999999999999999999999988776666554
No 380
>TIGR01761 thiaz-red thiazolinyl imide reductase. This reductase is found associated with gene clusters for the biosynthesis of various non-ribosomal peptide derived natural products in which cysteine is cyclized to a thiazoline ring containing an imide double bond. Examples include yersiniabactin (irp3/YbtU) and pyochelin (PchG).
Probab=95.09 E-value=0.15 Score=52.84 Aligned_cols=106 Identities=20% Similarity=0.157 Sum_probs=66.0
Q ss_pred CcEEEEEccchhHHHHHHHHHHC--CC-eEEEEeCCHHHHHHHHHHhcCc-ccccccccccCCCCccEEEEcCC----CC
Q 010101 367 GKIFVLVGAGGAGRALAFGAKSR--GA-RVIIFNRNYERAKALADAVSGE-ALHFEYLHEFFPEKGMILANASA----IG 438 (518)
Q Consensus 367 ~k~vlvlGaGg~araia~~L~~~--G~-~v~i~nRt~~ka~~la~~~~~~-~~~~~~l~~~~~~~~divInatp----~g 438 (518)
..+|.|+|+ ++|+.-+.++.+. ++ -+.|++|+.++++++|++++.. +.+++++ +.+.|+++.++| .+
T Consensus 3 ~~rVgViG~-~~G~~h~~al~~~~~~~eLvaV~d~~~erA~~~A~~~gi~~y~~~eel----l~d~Di~~V~ipt~~P~~ 77 (343)
T TIGR01761 3 VQSVVVCGT-RFGQFYLAAFAAAPERFELAGILAQGSERSRALAHRLGVPLYCEVEEL----PDDIDIACVVVRSAIVGG 77 (343)
T ss_pred CcEEEEEeH-HHHHHHHHHHHhCCCCcEEEEEEcCCHHHHHHHHHHhCCCccCCHHHH----hcCCCEEEEEeCCCCCCc
Confidence 358999999 7898888888775 46 5789999999999999999854 2244443 223344444333 22
Q ss_pred CCCCCCCCCCChhhhcCCC-EEEEEeeCCC----chHHHHHHHHCCCeeecc
Q 010101 439 MEPNSDQSPVPKEALKAYE-LVFDAVYTPR----NTRLLREAAEVGATVVSG 485 (518)
Q Consensus 439 ~~~~~~~~~~~~~~l~~~~-~v~Di~Y~P~----~T~ll~~A~~~G~~~i~G 485 (518)
... ++....+..+. ++++ +|- -..+++.|+++|+.+.-+
T Consensus 78 ~H~-----e~a~~aL~aGkHVL~E---KPla~~Ea~el~~~A~~~g~~l~v~ 121 (343)
T TIGR01761 78 QGS-----ALARALLARGIHVLQE---HPLHPRDIQDLLRLAERQGRRYLVN 121 (343)
T ss_pred cHH-----HHHHHHHhCCCeEEEc---CCCCHHHHHHHHHHHHHcCCEEEEE
Confidence 211 23333454432 2222 332 356778888888876544
No 381
>PRK06101 short chain dehydrogenase; Provisional
Probab=95.08 E-value=0.05 Score=53.00 Aligned_cols=42 Identities=29% Similarity=0.428 Sum_probs=37.8
Q ss_pred cEEEEEcc-chhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHH
Q 010101 368 KIFVLVGA-GGAGRALAFGAKSRGARVIIFNRNYERAKALADA 409 (518)
Q Consensus 368 k~vlvlGa-Gg~araia~~L~~~G~~v~i~nRt~~ka~~la~~ 409 (518)
++++|.|+ ||.|++++..|.+.|++|.+++|+.++.+++.+.
T Consensus 2 ~~vlItGas~giG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~ 44 (240)
T PRK06101 2 TAVLITGATSGIGKQLALDYAKQGWQVIACGRNQSVLDELHTQ 44 (240)
T ss_pred cEEEEEcCCcHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHh
Confidence 57899986 7899999999999999999999999998888664
No 382
>PRK05884 short chain dehydrogenase; Provisional
Probab=95.08 E-value=0.052 Score=52.46 Aligned_cols=69 Identities=22% Similarity=0.320 Sum_probs=49.8
Q ss_pred EEEEEcc-chhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHhcCccc--ccc---ccccc---CCCCccEEEEcCCC
Q 010101 369 IFVLVGA-GGAGRALAFGAKSRGARVIIFNRNYERAKALADAVSGEAL--HFE---YLHEF---FPEKGMILANASAI 437 (518)
Q Consensus 369 ~vlvlGa-Gg~araia~~L~~~G~~v~i~nRt~~ka~~la~~~~~~~~--~~~---~l~~~---~~~~~divInatp~ 437 (518)
+++|.|+ ||.|++++..|.+.|++|++++|+.++++++++.++...+ ++. ++.+. .....|++||+...
T Consensus 2 ~vlItGas~giG~~ia~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~id~lv~~ag~ 79 (223)
T PRK05884 2 EVLVTGGDTDLGRTIAEGFRNDGHKVTLVGARRDDLEVAAKELDVDAIVCDNTDPASLEEARGLFPHHLDTIVNVPAP 79 (223)
T ss_pred eEEEEeCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhccCcEEecCCCCHHHHHHHHHHHhhcCcEEEECCCc
Confidence 5899987 7899999999999999999999999999888877643322 111 11110 11247999997653
No 383
>PRK14573 bifunctional D-alanyl-alanine synthetase A/UDP-N-acetylmuramate--L-alanine ligase; Provisional
Probab=95.07 E-value=0.095 Score=60.79 Aligned_cols=94 Identities=16% Similarity=0.189 Sum_probs=57.4
Q ss_pred cEEEEEccchhHHHH-HHHHHHCCCeEEEEeCCHHH-HHHHHHHhcCcccccccccccCCCCccEEEEcCCCCCCCCCCC
Q 010101 368 KIFVLVGAGGAGRAL-AFGAKSRGARVIIFNRNYER-AKALADAVSGEALHFEYLHEFFPEKGMILANASAIGMEPNSDQ 445 (518)
Q Consensus 368 k~vlvlGaGg~arai-a~~L~~~G~~v~i~nRt~~k-a~~la~~~~~~~~~~~~l~~~~~~~~divInatp~g~~~~~~~ 445 (518)
++++|+|.||+|.++ |..|.++|++|++.+.+... .++|. ..+.... .....+ .+.++|+||- ++|
T Consensus 5 ~~i~viG~G~sG~salA~~L~~~G~~V~~sD~~~~~~~~~L~-~~gi~~~-~g~~~~-~~~~~d~vV~--Spg------- 72 (809)
T PRK14573 5 LFYHFIGIGGIGMSALAHILLDRGYSVSGSDLSEGKTVEKLK-AKGARFF-LGHQEE-HVPEDAVVVY--SSS------- 72 (809)
T ss_pred ceEEEEEecHHhHHHHHHHHHHCCCeEEEECCCCChHHHHHH-HCCCEEe-CCCCHH-HcCCCCEEEE--CCC-------
Confidence 479999999999999 88999999999999975432 22221 1121110 000000 0112333331 111
Q ss_pred CCCChhhhcCCCEEEEEeeCCCchHHHHHHHHCCCeeeccHHHHHHH
Q 010101 446 SPVPKEALKAYELVFDAVYTPRNTRLLREAAEVGATVVSGVEMFIRQ 492 (518)
Q Consensus 446 ~~~~~~~l~~~~~v~Di~Y~P~~T~ll~~A~~~G~~~i~G~~ml~~Q 492 (518)
-|...|.+++|+++|++++.-.+++...
T Consensus 73 -------------------I~~~~p~~~~a~~~gi~v~~~~el~~~~ 100 (809)
T PRK14573 73 -------------------ISKDNVEYLSAKSRGNRLVHRAELLAEL 100 (809)
T ss_pred -------------------cCCCCHHHHHHHHCCCcEEeHHHHHHHH
Confidence 1235678899999999999999987443
No 384
>PRK08267 short chain dehydrogenase; Provisional
Probab=95.07 E-value=0.051 Score=53.50 Aligned_cols=44 Identities=34% Similarity=0.392 Sum_probs=39.6
Q ss_pred cEEEEEcc-chhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHhc
Q 010101 368 KIFVLVGA-GGAGRALAFGAKSRGARVIIFNRNYERAKALADAVS 411 (518)
Q Consensus 368 k~vlvlGa-Gg~araia~~L~~~G~~v~i~nRt~~ka~~la~~~~ 411 (518)
|+++|+|+ ||.|++++..|.+.|++|.+++|+.++.+++.+.++
T Consensus 2 k~vlItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~ 46 (260)
T PRK08267 2 KSIFITGAASGIGRATALLFAAEGWRVGAYDINEAGLAALAAELG 46 (260)
T ss_pred cEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHhc
Confidence 57999987 789999999999999999999999999988877654
No 385
>PRK12429 3-hydroxybutyrate dehydrogenase; Provisional
Probab=95.07 E-value=0.058 Score=52.69 Aligned_cols=45 Identities=38% Similarity=0.567 Sum_probs=40.2
Q ss_pred CCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHh
Q 010101 366 AGKIFVLVGA-GGAGRALAFGAKSRGARVIIFNRNYERAKALADAV 410 (518)
Q Consensus 366 ~~k~vlvlGa-Gg~araia~~L~~~G~~v~i~nRt~~ka~~la~~~ 410 (518)
++++++|.|+ |+.|++++..|.+.|++|.+++|+.++.+++..++
T Consensus 3 ~~~~vlItG~sg~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~ 48 (258)
T PRK12429 3 KGKVALVTGAASGIGLEIALALAKEGAKVVIADLNDEAAAAAAEAL 48 (258)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHH
Confidence 5689999996 88999999999999999999999999888876665
No 386
>PRK07024 short chain dehydrogenase; Provisional
Probab=95.07 E-value=0.052 Score=53.42 Aligned_cols=45 Identities=27% Similarity=0.344 Sum_probs=39.6
Q ss_pred CcEEEEEcc-chhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHhc
Q 010101 367 GKIFVLVGA-GGAGRALAFGAKSRGARVIIFNRNYERAKALADAVS 411 (518)
Q Consensus 367 ~k~vlvlGa-Gg~araia~~L~~~G~~v~i~nRt~~ka~~la~~~~ 411 (518)
+++++|.|+ ||.|++++..|++.|++|++++|+.++++++.+.+.
T Consensus 2 ~~~vlItGas~gIG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~ 47 (257)
T PRK07024 2 PLKVFITGASSGIGQALAREYARQGATLGLVARRTDALQAFAARLP 47 (257)
T ss_pred CCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhcc
Confidence 468999986 789999999999999999999999999888877653
No 387
>PF01118 Semialdhyde_dh: Semialdehyde dehydrogenase, NAD binding domain; InterPro: IPR000534 The semialdehyde dehydrogenase family is found in N-acetyl-glutamine semialdehyde dehydrogenase (AgrC), which is involved in arginine biosynthesis, and aspartate-semialdehyde dehydrogenase [], an enzyme involved in the biosynthesis of various amino acids from aspartate. This family is also found in yeast and fungal Arg5,6 protein, which is cleaved into the enzymes N-acety-gamma-glutamyl-phosphate reductase and acetylglutamate kinase. These are also involved in arginine biosynthesis. All proteins in this entry contain a NAD binding region of semialdehyde dehydrogenase.; GO: 0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0006520 cellular amino acid metabolic process, 0055114 oxidation-reduction process, 0005737 cytoplasm; PDB: 3Q0E_B 1MB4_A 3PZR_A 1MC4_A 3TZ6_A 3VOS_A 2CVO_B 2R00_C 2QZ9_A 2EP5_C ....
Probab=95.07 E-value=0.0065 Score=53.17 Aligned_cols=92 Identities=21% Similarity=0.113 Sum_probs=60.3
Q ss_pred EEEEEc-cchhHHHHHHHHHHCCC--eEEEEeCCHHHHHHHHHHhcC----cccccccccccCCCCccEEEEcCCCCCCC
Q 010101 369 IFVLVG-AGGAGRALAFGAKSRGA--RVIIFNRNYERAKALADAVSG----EALHFEYLHEFFPEKGMILANASAIGMEP 441 (518)
Q Consensus 369 ~vlvlG-aGg~araia~~L~~~G~--~v~i~nRt~~ka~~la~~~~~----~~~~~~~l~~~~~~~~divInatp~g~~~ 441 (518)
||.|+| +|-+|+.++..|.+.-. -+.++.|+.+..+.+...++. ....+++.......+.|+++.|+|.+...
T Consensus 1 rV~IvGAtG~vG~~l~~lL~~hp~~e~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dvvf~a~~~~~~~ 80 (121)
T PF01118_consen 1 RVAIVGATGYVGRELLRLLAEHPDFELVALVSSSRSAGKPLSEVFPHPKGFEDLSVEDADPEELSDVDVVFLALPHGASK 80 (121)
T ss_dssp EEEEESTTSHHHHHHHHHHHHTSTEEEEEEEESTTTTTSBHHHTTGGGTTTEEEBEEETSGHHHTTESEEEE-SCHHHHH
T ss_pred CEEEECCCCHHHHHHHHHHhcCCCccEEEeeeeccccCCeeehhccccccccceeEeecchhHhhcCCEEEecCchhHHH
Confidence 689999 68899999999988543 477888887666677766541 12233331111246789999999865321
Q ss_pred CCCCCCCChhhhcCCCEEEEEeeC
Q 010101 442 NSDQSPVPKEALKAYELVFDAVYT 465 (518)
Q Consensus 442 ~~~~~~~~~~~l~~~~~v~Di~Y~ 465 (518)
.+....+..+..|+|+...
T Consensus 81 -----~~~~~~~~~g~~ViD~s~~ 99 (121)
T PF01118_consen 81 -----ELAPKLLKAGIKVIDLSGD 99 (121)
T ss_dssp -----HHHHHHHHTTSEEEESSST
T ss_pred -----HHHHHHhhCCcEEEeCCHH
Confidence 1223346778899999765
No 388
>PRK08303 short chain dehydrogenase; Provisional
Probab=95.06 E-value=0.046 Score=55.71 Aligned_cols=37 Identities=38% Similarity=0.650 Sum_probs=33.4
Q ss_pred ccCCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEeCCH
Q 010101 364 PIAGKIFVLVGA-GGAGRALAFGAKSRGARVIIFNRNY 400 (518)
Q Consensus 364 ~l~~k~vlvlGa-Gg~araia~~L~~~G~~v~i~nRt~ 400 (518)
.+++|.++|.|+ +|.|++++.+|++.|++|++++|+.
T Consensus 5 ~l~~k~~lITGgs~GIG~aia~~la~~G~~Vv~~~r~~ 42 (305)
T PRK08303 5 PLRGKVALVAGATRGAGRGIAVELGAAGATVYVTGRST 42 (305)
T ss_pred CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeccc
Confidence 467899999998 5899999999999999999999973
No 389
>cd00300 LDH_like L-lactate dehydrogenase-like enzymes. Members of this subfamily are tetrameric NAD-dependent 2-hydroxycarboxylate dehydrogenases including LDHs, L-2-hydroxyisocaproate dehydrogenases (L-HicDH), and LDH-like malate dehydrogenases (MDH). Dehydrogenases catalyze the conversion of carbonyl compounds to alcohols or amino acids. LDHs catalyze the last step of glycolysis in which pyruvate is converted to L-lactate. Vertebrate LDHs are non-allosteric, but some bacterial LDHs are activated by an allosteric effector such as fructose-1,6-bisphosphate. L-HicDH catalyzes the conversion of a variety of 2-oxo carboxylic acids with medium-sized aliphatic or aromatic side chains. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH-like subfamily is part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of prot
Probab=95.06 E-value=0.054 Score=55.17 Aligned_cols=69 Identities=22% Similarity=0.295 Sum_probs=51.5
Q ss_pred EEEEccchhHHHHHHHHHHCCC--eEEEEeCCHHHHHHHHHHhcCccc-----cc---ccccccCCCCccEEEEcCCCCC
Q 010101 370 FVLVGAGGAGRALAFGAKSRGA--RVIIFNRNYERAKALADAVSGEAL-----HF---EYLHEFFPEKGMILANASAIGM 439 (518)
Q Consensus 370 vlvlGaGg~araia~~L~~~G~--~v~i~nRt~~ka~~la~~~~~~~~-----~~---~~l~~~~~~~~divInatp~g~ 439 (518)
+.|||+|++|.++++.|+..|. ++++++++.++++.++.++..-.. .+ .+. + ...++|+||.|....-
T Consensus 1 i~iiGaG~VG~~~a~~l~~~~~~~el~l~D~~~~~~~g~~~DL~~~~~~~~~~~i~~~~~~-~-~l~~aDiVIitag~p~ 78 (300)
T cd00300 1 ITIIGAGNVGAAVAFALIAKGLASELVLVDVNEEKAKGDALDLSHASAFLATGTIVRGGDY-A-DAADADIVVITAGAPR 78 (300)
T ss_pred CEEECCCHHHHHHHHHHHhcCCCCEEEEEeCCccHHHHHHHhHHHhccccCCCeEEECCCH-H-HhCCCCEEEEcCCCCC
Confidence 4699999999999999999885 799999999999988877652110 11 111 2 3567999999886543
Q ss_pred C
Q 010101 440 E 440 (518)
Q Consensus 440 ~ 440 (518)
.
T Consensus 79 ~ 79 (300)
T cd00300 79 K 79 (300)
T ss_pred C
Confidence 3
No 390
>COG0059 IlvC Ketol-acid reductoisomerase [Amino acid transport and metabolism / Coenzyme metabolism]
Probab=95.05 E-value=0.039 Score=55.28 Aligned_cols=71 Identities=20% Similarity=0.169 Sum_probs=59.4
Q ss_pred ccCCcEEEEEccchhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHhcCcccccccccccCCCCccEEEEcCCCC
Q 010101 364 PIAGKIFVLVGAGGAGRALAFGAKSRGARVIIFNRNYERAKALADAVSGEALHFEYLHEFFPEKGMILANASAIG 438 (518)
Q Consensus 364 ~l~~k~vlvlGaGg~araia~~L~~~G~~v~i~nRt~~ka~~la~~~~~~~~~~~~l~~~~~~~~divInatp~g 438 (518)
.+++|+|.|||.|-=|+|=+..|...|.+|.|-.|.-..+-+.|++-|.+..++++ ...++|+|++-+|--
T Consensus 15 ~LkgK~iaIIGYGsQG~ahalNLRDSGlnViiGlr~g~~s~~kA~~dGf~V~~v~e----a~k~ADvim~L~PDe 85 (338)
T COG0059 15 LLKGKKVAIIGYGSQGHAQALNLRDSGLNVIIGLRKGSSSWKKAKEDGFKVYTVEE----AAKRADVVMILLPDE 85 (338)
T ss_pred HhcCCeEEEEecChHHHHHHhhhhhcCCcEEEEecCCchhHHHHHhcCCEeecHHH----HhhcCCEEEEeCchh
Confidence 57899999999999999999999999999999999888877778776666555554 456789999988853
No 391
>PRK07074 short chain dehydrogenase; Provisional
Probab=95.03 E-value=0.057 Score=52.98 Aligned_cols=45 Identities=33% Similarity=0.479 Sum_probs=40.2
Q ss_pred CcEEEEEcc-chhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHhc
Q 010101 367 GKIFVLVGA-GGAGRALAFGAKSRGARVIIFNRNYERAKALADAVS 411 (518)
Q Consensus 367 ~k~vlvlGa-Gg~araia~~L~~~G~~v~i~nRt~~ka~~la~~~~ 411 (518)
+++++|.|+ |+.|++++..|.+.|++|++++|+.++++.+++.+.
T Consensus 2 ~k~ilItGat~~iG~~la~~L~~~g~~v~~~~r~~~~~~~~~~~~~ 47 (257)
T PRK07074 2 KRTALVTGAAGGIGQALARRFLAAGDRVLALDIDAAALAAFADALG 47 (257)
T ss_pred CCEEEEECCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhc
Confidence 468999998 789999999999999999999999999888887653
No 392
>PRK06940 short chain dehydrogenase; Provisional
Probab=95.03 E-value=0.051 Score=54.32 Aligned_cols=43 Identities=33% Similarity=0.546 Sum_probs=37.7
Q ss_pred CcEEEEEccchhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHh
Q 010101 367 GKIFVLVGAGGAGRALAFGAKSRGARVIIFNRNYERAKALADAV 410 (518)
Q Consensus 367 ~k~vlvlGaGg~araia~~L~~~G~~v~i~nRt~~ka~~la~~~ 410 (518)
+|.++|.|+||.|++++..|. .|++|++++|+.++++++.+++
T Consensus 2 ~k~~lItGa~gIG~~la~~l~-~G~~Vv~~~r~~~~~~~~~~~l 44 (275)
T PRK06940 2 KEVVVVIGAGGIGQAIARRVG-AGKKVLLADYNEENLEAAAKTL 44 (275)
T ss_pred CCEEEEECCChHHHHHHHHHh-CCCEEEEEeCCHHHHHHHHHHH
Confidence 478899999999999999996 7999999999998887776655
No 393
>PRK08628 short chain dehydrogenase; Provisional
Probab=94.99 E-value=0.052 Score=53.29 Aligned_cols=47 Identities=23% Similarity=0.475 Sum_probs=39.3
Q ss_pred cccCCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHh
Q 010101 363 SPIAGKIFVLVGA-GGAGRALAFGAKSRGARVIIFNRNYERAKALADAV 410 (518)
Q Consensus 363 ~~l~~k~vlvlGa-Gg~araia~~L~~~G~~v~i~nRt~~ka~~la~~~ 410 (518)
.++++++++|+|+ ||.|++++..|.+.|++|.++.|+.++. ++.+.+
T Consensus 3 ~~l~~~~ilItGasggiG~~la~~l~~~G~~v~~~~r~~~~~-~~~~~~ 50 (258)
T PRK08628 3 LNLKDKVVIVTGGASGIGAAISLRLAEEGAIPVIFGRSAPDD-EFAEEL 50 (258)
T ss_pred CCcCCCEEEEeCCCChHHHHHHHHHHHcCCcEEEEcCChhhH-HHHHHH
Confidence 3578899999997 6899999999999999999999998776 444443
No 394
>PRK04663 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=94.97 E-value=0.11 Score=55.71 Aligned_cols=35 Identities=23% Similarity=0.275 Sum_probs=30.2
Q ss_pred CC-cEEEEEccchhHHHHHHHHHHC--CCeEEEEeCCH
Q 010101 366 AG-KIFVLVGAGGAGRALAFGAKSR--GARVIIFNRNY 400 (518)
Q Consensus 366 ~~-k~vlvlGaGg~araia~~L~~~--G~~v~i~nRt~ 400 (518)
.+ ++++|+|.|++|++++..|.+. |++|++.+...
T Consensus 5 ~~~~~v~viG~G~sG~s~~~~l~~~~~~~~v~~~D~~~ 42 (438)
T PRK04663 5 QGIKNVVVVGLGITGLSVVKHLRKYQPQLTVKVIDTRE 42 (438)
T ss_pred cCCceEEEEeccHHHHHHHHHHHhcCCCCeEEEEeCCC
Confidence 45 7899999999999999999877 47899999754
No 395
>TIGR03128 RuMP_HxlA 3-hexulose-6-phosphate synthase. at the cost of also yielding formaldehyde. These latter species tend usually have a formaldehyde-activating enzyme to attach formaldehyde to the C1 carrier tetrahydromethanopterin. In these species, the enzyme is viewed as a lyase rather than a synthase and is called D-arabino 3-hexulose 6-phosphate formaldehyde lyase. Note that there is some overlap in specificity with the Escherichia coli enzyme 3-keto-L-gulonate 6-phosphate decarboxylase.
Probab=94.96 E-value=0.81 Score=43.62 Aligned_cols=130 Identities=12% Similarity=0.123 Sum_probs=86.8
Q ss_pred eEEEeecCCCHHHHHHHHHHHHhhCCCEEEEEeccCC-CCcHHHHHHHhcC-CCCcEEEEeecCCCCCCCCCCcHHHHHH
Q 010101 10 LVCTQLECETTEEMQASIEQAKVEGADLVELCIDSME-FSHISEVDKLIQH-PTLPAIVSYRLKSSRKSSDEACKNTCLQ 87 (518)
Q Consensus 10 ~icv~l~~~~~~~~~~~~~~~~~~g~D~vElRlD~l~-~~~~~~l~~l~~~-~~~PiI~T~R~~~eGG~~~~~~~~~~~~ 87 (518)
++|+.|-..+.++++.-++.+ ..|.|++|+-.-++. +. .+.+..+++. .+.++++..... + . .. +
T Consensus 1 ~l~~alD~~~~~~a~~~~~~l-~~~v~~iev~~~l~~~~g-~~~i~~l~~~~~~~~i~~d~k~~-d------~-~~-~-- 67 (206)
T TIGR03128 1 KLQLALDLLDIEEALELAEKV-ADYVDIIEIGTPLIKNEG-IEAVKEMKEAFPDRKVLADLKTM-D------A-GE-Y-- 67 (206)
T ss_pred CeEEEecCCCHHHHHHHHHHc-ccCeeEEEeCCHHHHHhC-HHHHHHHHHHCCCCEEEEEEeec-c------c-hH-H--
Confidence 378999999999999887765 788999998544443 22 2467788765 356777766542 1 1 11 1
Q ss_pred HHHHHhhcCCcEEEEecCCCCchhhHHHh-hcCCCcEEEEeeecCCCCCCChhHHHHHHHHHHHcCCCEEEEE
Q 010101 88 VLRRALDLDVEFVEMDYEVASDPLMSEII-YSRSNTKIIVSSYLNGGGKPTTEKLGDVIACMQATGADVMKLE 159 (518)
Q Consensus 88 ll~~~~~~g~~yvDiEl~~~~~~~~~l~~-~~~~~~kiI~S~H~f~~~tp~~~~l~~~~~~~~~~gadivKia 159 (518)
-++.+.+.|+++|=+-...+...+.++.+ .++.+.++++..++. .| ..+....+.++|+|++|+-
T Consensus 68 ~~~~~~~~Gad~i~vh~~~~~~~~~~~i~~~~~~g~~~~~~~~~~--~t-----~~~~~~~~~~~g~d~v~~~ 133 (206)
T TIGR03128 68 EAEQAFAAGADIVTVLGVADDATIKGAVKAAKKHGKEVQVDLINV--KD-----KVKRAKELKELGADYIGVH 133 (206)
T ss_pred HHHHHHHcCCCEEEEeccCCHHHHHHHHHHHHHcCCEEEEEecCC--CC-----hHHHHHHHHHcCCCEEEEc
Confidence 35677889999988777665433344444 455789999876654 22 3344455567799999883
No 396
>PRK08340 glucose-1-dehydrogenase; Provisional
Probab=94.94 E-value=0.058 Score=53.17 Aligned_cols=42 Identities=26% Similarity=0.332 Sum_probs=37.7
Q ss_pred EEEEEcc-chhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHh
Q 010101 369 IFVLVGA-GGAGRALAFGAKSRGARVIIFNRNYERAKALADAV 410 (518)
Q Consensus 369 ~vlvlGa-Gg~araia~~L~~~G~~v~i~nRt~~ka~~la~~~ 410 (518)
+++|.|+ ||.|++++..|.+.|++|++++|+.++.+++.+++
T Consensus 2 ~vlItGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l 44 (259)
T PRK08340 2 NVLVTASSRGIGFNVARELLKKGARVVISSRNEENLEKALKEL 44 (259)
T ss_pred eEEEEcCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHH
Confidence 6899987 68999999999999999999999999888777665
No 397
>cd04740 DHOD_1B_like Dihydroorotate dehydrogenase (DHOD) class 1B FMN-binding domain. DHOD catalyzes the oxidation of (S)-dihydroorotate to orotate. This is the fourth step and the only redox reaction in the de novo biosynthesis of UMP, the precursor of all pyrimidine nucleotides. DHOD requires FMN as co-factor. DHOD divides into class 1 and class 2 based on their amino acid sequences and cellular location. Members of class 1 are cytosolic enzymes and multimers while class 2 enzymes are membrane associated and monomeric. The class 1 enzymes can be further divided into subtypes 1A and 1B which are homodimers and heterotetrameric proteins, respectively.
Probab=94.91 E-value=0.98 Score=45.76 Aligned_cols=83 Identities=20% Similarity=0.246 Sum_probs=60.5
Q ss_pred eEEEeecCCCHHHHHHHHHHHHhhCCCEEEEEecc---------CCCCc---HHHHHHHhcCCCCcEEEEeecCCCCCCC
Q 010101 10 LVCTQLECETTEEMQASIEQAKVEGADLVELCIDS---------MEFSH---ISEVDKLIQHPTLPAIVSYRLKSSRKSS 77 (518)
Q Consensus 10 ~icv~l~~~~~~~~~~~~~~~~~~g~D~vElRlD~---------l~~~~---~~~l~~l~~~~~~PiI~T~R~~~eGG~~ 77 (518)
.++++|.+.+.++....++.+.+.|+|.||+=+=+ +..++ .+.+..+++..+.|+.+-++..
T Consensus 91 p~ivsi~g~~~~~~~~~a~~~~~~G~d~iElN~~cP~~~~~g~~~~~~~~~~~eiv~~vr~~~~~Pv~vKl~~~------ 164 (296)
T cd04740 91 PVIASIAGSTVEEFVEVAEKLADAGADAIELNISCPNVKGGGMAFGTDPEAVAEIVKAVKKATDVPVIVKLTPN------ 164 (296)
T ss_pred cEEEEEecCCHHHHHHHHHHHHHcCCCEEEEECCCCCCCCCcccccCCHHHHHHHHHHHHhccCCCEEEEeCCC------
Confidence 46689999999999888888877899999995432 21122 2456667766789999888631
Q ss_pred CCCcHHHHHHHHHHHhhcCCcEEEE
Q 010101 78 DEACKNTCLQVLRRALDLDVEFVEM 102 (518)
Q Consensus 78 ~~~~~~~~~~ll~~~~~~g~~yvDi 102 (518)
.++-.++.+.+.+.|+|+|++
T Consensus 165 ----~~~~~~~a~~~~~~G~d~i~~ 185 (296)
T cd04740 165 ----VTDIVEIARAAEEAGADGLTL 185 (296)
T ss_pred ----chhHHHHHHHHHHcCCCEEEE
Confidence 234566777788899999876
No 398
>TIGR01289 LPOR light-dependent protochlorophyllide reductase. This model represents the light-dependent, NADPH-dependent form of protochlorophyllide reductase. It belongs to the short chain alcohol dehydrogenase family, in contrast to the nitrogenase-related light-independent form.
Probab=94.90 E-value=0.064 Score=54.84 Aligned_cols=45 Identities=24% Similarity=0.358 Sum_probs=40.4
Q ss_pred CcEEEEEcc-chhHHHHHHHHHHCC-CeEEEEeCCHHHHHHHHHHhc
Q 010101 367 GKIFVLVGA-GGAGRALAFGAKSRG-ARVIIFNRNYERAKALADAVS 411 (518)
Q Consensus 367 ~k~vlvlGa-Gg~araia~~L~~~G-~~v~i~nRt~~ka~~la~~~~ 411 (518)
+++++|.|+ +|+|++++..|.+.| ++|++++|+.+++++++++++
T Consensus 3 ~k~vlITGas~GIG~aia~~L~~~G~~~V~l~~r~~~~~~~~~~~l~ 49 (314)
T TIGR01289 3 KPTVIITGASSGLGLYAAKALAATGEWHVIMACRDFLKAEQAAKSLG 49 (314)
T ss_pred CCEEEEECCCChHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhc
Confidence 678999988 689999999999999 799999999999988887764
No 399
>PRK07904 short chain dehydrogenase; Provisional
Probab=94.90 E-value=0.053 Score=53.49 Aligned_cols=44 Identities=18% Similarity=0.211 Sum_probs=37.4
Q ss_pred CcEEEEEcc-chhHHHHHHHHHHCC-CeEEEEeCCHHH-HHHHHHHh
Q 010101 367 GKIFVLVGA-GGAGRALAFGAKSRG-ARVIIFNRNYER-AKALADAV 410 (518)
Q Consensus 367 ~k~vlvlGa-Gg~araia~~L~~~G-~~v~i~nRt~~k-a~~la~~~ 410 (518)
+++++|.|+ ||.|++++..|.+.| ++|+++.|+.++ .+++++++
T Consensus 8 ~~~vlItGas~giG~~la~~l~~~gg~~V~~~~r~~~~~~~~~~~~l 54 (253)
T PRK07904 8 PQTILLLGGTSEIGLAICERYLKNAPARVVLAALPDDPRRDAAVAQM 54 (253)
T ss_pred CcEEEEEcCCcHHHHHHHHHHHhcCCCeEEEEeCCcchhHHHHHHHH
Confidence 678999988 689999999999986 699999999886 66666555
No 400
>cd05293 LDH_1 A subgroup of L-lactate dehydrogenases. L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed of eukaryotic LDHs. Vertebrate LDHs are non-allosteric. This is in contrast to some bacterial LDHs that are activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.
Probab=94.89 E-value=0.074 Score=54.51 Aligned_cols=69 Identities=13% Similarity=0.206 Sum_probs=51.1
Q ss_pred cEEEEEccchhHHHHHHHHHHCCC--eEEEEeCCHHHHHHHHHHhcCcc-------ccc-ccccccCCCCccEEEEcCCC
Q 010101 368 KIFVLVGAGGAGRALAFGAKSRGA--RVIIFNRNYERAKALADAVSGEA-------LHF-EYLHEFFPEKGMILANASAI 437 (518)
Q Consensus 368 k~vlvlGaGg~araia~~L~~~G~--~v~i~nRt~~ka~~la~~~~~~~-------~~~-~~l~~~~~~~~divInatp~ 437 (518)
.++.|+|+|.+|.++++.|...|. ++.+++++.++++..+.++.... +.. .+.+ ...++|+||.|...
T Consensus 4 ~Ki~IiGaG~VG~~~a~~l~~~~~~~el~LiD~~~~~~~g~a~Dl~~~~~~~~~~~v~~~~dy~--~~~~adivvitaG~ 81 (312)
T cd05293 4 NKVTVVGVGQVGMACAISILAKGLADELVLVDVVEDKLKGEAMDLQHGSAFLKNPKIEADKDYS--VTANSKVVIVTAGA 81 (312)
T ss_pred CEEEEECCCHHHHHHHHHHHhcCCCCEEEEEeCCccHHHHHHHHHHHhhccCCCCEEEECCCHH--HhCCCCEEEECCCC
Confidence 589999999999999999998886 89999999888877776664211 111 1222 25679999987654
Q ss_pred C
Q 010101 438 G 438 (518)
Q Consensus 438 g 438 (518)
.
T Consensus 82 ~ 82 (312)
T cd05293 82 R 82 (312)
T ss_pred C
Confidence 3
No 401
>KOG1207 consensus Diacetyl reductase/L-xylulose reductase [Secondary metabolites biosynthesis, transport and catabolism]
Probab=94.89 E-value=0.063 Score=49.64 Aligned_cols=49 Identities=31% Similarity=0.533 Sum_probs=44.9
Q ss_pred ccCCcEEEEEccc-hhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHhcC
Q 010101 364 PIAGKIFVLVGAG-GAGRALAFGAKSRGARVIIFNRNYERAKALADAVSG 412 (518)
Q Consensus 364 ~l~~k~vlvlGaG-g~araia~~L~~~G~~v~i~nRt~~ka~~la~~~~~ 412 (518)
.+.|+.+++.|+| |.|++++.+|++.|++|.-+.|+++...+|.++...
T Consensus 4 ~laG~~vlvTgagaGIG~~~v~~La~aGA~ViAvaR~~a~L~sLV~e~p~ 53 (245)
T KOG1207|consen 4 SLAGVIVLVTGAGAGIGKEIVLSLAKAGAQVIAVARNEANLLSLVKETPS 53 (245)
T ss_pred cccceEEEeecccccccHHHHHHHHhcCCEEEEEecCHHHHHHHHhhCCc
Confidence 4678999999998 899999999999999999999999999999887654
No 402
>PRK05708 2-dehydropantoate 2-reductase; Provisional
Probab=94.88 E-value=0.078 Score=54.14 Aligned_cols=42 Identities=26% Similarity=0.346 Sum_probs=37.5
Q ss_pred cEEEEEccchhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHH
Q 010101 368 KIFVLVGAGGAGRALAFGAKSRGARVIIFNRNYERAKALADA 409 (518)
Q Consensus 368 k~vlvlGaGg~araia~~L~~~G~~v~i~nRt~~ka~~la~~ 409 (518)
.+++|+|+|++|.-+++.|.+.|.+|+++.|..++.+++-++
T Consensus 3 m~I~IiGaGaiG~~~a~~L~~~G~~V~lv~r~~~~~~~i~~~ 44 (305)
T PRK05708 3 MTWHILGAGSLGSLWACRLARAGLPVRLILRDRQRLAAYQQA 44 (305)
T ss_pred ceEEEECCCHHHHHHHHHHHhCCCCeEEEEechHHHHHHhhc
Confidence 479999999999999999999999999999998888777543
No 403
>PF00899 ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-activating enzyme (E1 enzyme) [, ] activates ubiquitin by first adenylating with ATP its C-terminal glycine residue and thereafter linking this residue to the side chain of a cysteine residue in E1, yielding an ubiquitin-E1 thiolester and free AMP. Later the ubiquitin moiety is transferred to a cysteine residue on one of the many forms of ubiquitin- conjugating enzymes (E2). The family of ubiquitin-activating enzymes shares in its catalytic domain significant similarity with a large family of NAD/FAD-binding proteins. This domain is based on the common NAD/FAD-binding fold and finds members of several families, including UBA ubiquitin activating enzymes; the hesA/moeB/thiF family; NADH peroxidases; the LDH family; sarcosin oxidase; phytoene dehydrogenases; alanine dehydrogenases; hydroxyacyl-CoA dehydrogenases and many other NAD/FAD dependent dehydrogenases and oxidases.; GO: 0003824 catalytic activity; PDB: 1ZKM_D 1ZUD_3 1ZFN_D 1R4M_G 2NVU_A 1R4N_C 3DBR_A 3DBH_C 3DBL_G 1YOV_A ....
Probab=94.87 E-value=0.033 Score=49.54 Aligned_cols=34 Identities=24% Similarity=0.542 Sum_probs=30.8
Q ss_pred CcEEEEEccchhHHHHHHHHHHCCC-eEEEEeCCH
Q 010101 367 GKIFVLVGAGGAGRALAFGAKSRGA-RVIIFNRNY 400 (518)
Q Consensus 367 ~k~vlvlGaGg~araia~~L~~~G~-~v~i~nRt~ 400 (518)
+++|+|+|+|+.|..++..|+..|+ +++|++.+.
T Consensus 2 ~~~v~iiG~G~vGs~va~~L~~~Gv~~i~lvD~d~ 36 (135)
T PF00899_consen 2 NKRVLIIGAGGVGSEVAKNLARSGVGKITLVDDDI 36 (135)
T ss_dssp T-EEEEESTSHHHHHHHHHHHHHTTSEEEEEESSB
T ss_pred CCEEEEECcCHHHHHHHHHHHHhCCCceeecCCcc
Confidence 4799999999999999999999999 999999764
No 404
>TIGR01087 murD UDP-N-acetylmuramoylalanine--D-glutamate ligase.
Probab=94.86 E-value=0.098 Score=55.98 Aligned_cols=33 Identities=27% Similarity=0.407 Sum_probs=29.6
Q ss_pred EEEEEccchhHHHHHHHHHHCCCeEEEEeCCHH
Q 010101 369 IFVLVGAGGAGRALAFGAKSRGARVIIFNRNYE 401 (518)
Q Consensus 369 ~vlvlGaGg~araia~~L~~~G~~v~i~nRt~~ 401 (518)
+++|+|.||+|++++..|.+.|++|++.++...
T Consensus 1 ~~~~iG~G~~G~a~a~~l~~~G~~V~~sD~~~~ 33 (433)
T TIGR01087 1 KILILGLGKTGRAVARFLHKKGAEVTVTDLKPN 33 (433)
T ss_pred CEEEEEeCHhHHHHHHHHHHCCCEEEEEeCCCC
Confidence 478999999999999999999999999997543
No 405
>PRK06463 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=94.86 E-value=0.088 Score=51.66 Aligned_cols=45 Identities=31% Similarity=0.493 Sum_probs=35.2
Q ss_pred ccCCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEeC-CHHHHHHHHH
Q 010101 364 PIAGKIFVLVGA-GGAGRALAFGAKSRGARVIIFNR-NYERAKALAD 408 (518)
Q Consensus 364 ~l~~k~vlvlGa-Gg~araia~~L~~~G~~v~i~nR-t~~ka~~la~ 408 (518)
.+++|+++|.|+ ||.|++++..|.+.|++|.+..| +.+.++++.+
T Consensus 4 ~l~~k~~lItGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~l~~ 50 (255)
T PRK06463 4 RFKGKVALITGGTRGIGRAIAEAFLREGAKVAVLYNSAENEAKELRE 50 (255)
T ss_pred CcCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHh
Confidence 356899999987 78999999999999998877655 4445555543
No 406
>PRK05653 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated
Probab=94.86 E-value=0.071 Score=51.44 Aligned_cols=45 Identities=42% Similarity=0.671 Sum_probs=39.6
Q ss_pred CCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHh
Q 010101 366 AGKIFVLVGA-GGAGRALAFGAKSRGARVIIFNRNYERAKALADAV 410 (518)
Q Consensus 366 ~~k~vlvlGa-Gg~araia~~L~~~G~~v~i~nRt~~ka~~la~~~ 410 (518)
.+++++|.|+ |+.|+.++..|.+.|++|.+++|+.++.+.+...+
T Consensus 4 ~~~~ilItGasg~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~ 49 (246)
T PRK05653 4 QGKTALVTGASRGIGRAIALRLAADGAKVVIYDSNEEAAEALAAEL 49 (246)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHH
Confidence 4689999997 78999999999999999999999998877776654
No 407
>PRK06914 short chain dehydrogenase; Provisional
Probab=94.85 E-value=0.069 Score=53.15 Aligned_cols=44 Identities=30% Similarity=0.360 Sum_probs=38.4
Q ss_pred CcEEEEEcc-chhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHh
Q 010101 367 GKIFVLVGA-GGAGRALAFGAKSRGARVIIFNRNYERAKALADAV 410 (518)
Q Consensus 367 ~k~vlvlGa-Gg~araia~~L~~~G~~v~i~nRt~~ka~~la~~~ 410 (518)
+++++|.|+ |+.|++++..|.+.|++|+++.|+.++.+++.+..
T Consensus 3 ~k~~lItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~ 47 (280)
T PRK06914 3 KKIAIVTGASSGFGLLTTLELAKKGYLVIATMRNPEKQENLLSQA 47 (280)
T ss_pred CCEEEEECCCchHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHH
Confidence 578999997 78999999999999999999999998887776543
No 408
>PRK12384 sorbitol-6-phosphate dehydrogenase; Provisional
Probab=94.80 E-value=0.071 Score=52.36 Aligned_cols=44 Identities=27% Similarity=0.447 Sum_probs=38.4
Q ss_pred CcEEEEEcc-chhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHh
Q 010101 367 GKIFVLVGA-GGAGRALAFGAKSRGARVIIFNRNYERAKALADAV 410 (518)
Q Consensus 367 ~k~vlvlGa-Gg~araia~~L~~~G~~v~i~nRt~~ka~~la~~~ 410 (518)
+|+++|.|+ |+.|++++..|++.|++|.+++|+.++.+++++.+
T Consensus 2 ~k~ilItG~~~~IG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~ 46 (259)
T PRK12384 2 NQVAVVIGGGQTLGAFLCHGLAEEGYRVAVADINSEKAANVAQEI 46 (259)
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHH
Confidence 578999988 57999999999999999999999988887776554
No 409
>PLN02989 cinnamyl-alcohol dehydrogenase family protein
Probab=94.79 E-value=0.055 Score=55.22 Aligned_cols=40 Identities=23% Similarity=0.177 Sum_probs=34.5
Q ss_pred CcEEEEEcc-chhHHHHHHHHHHCCCeEEEEeCCHHHHHHH
Q 010101 367 GKIFVLVGA-GGAGRALAFGAKSRGARVIIFNRNYERAKAL 406 (518)
Q Consensus 367 ~k~vlvlGa-Gg~araia~~L~~~G~~v~i~nRt~~ka~~l 406 (518)
+|++||.|+ |+.|++++..|.+.|++|+++.|+.++.+..
T Consensus 5 ~k~vlVtG~~G~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~ 45 (325)
T PLN02989 5 GKVVCVTGASGYIASWIVKLLLFRGYTINATVRDPKDRKKT 45 (325)
T ss_pred CCEEEEECCchHHHHHHHHHHHHCCCEEEEEEcCCcchhhH
Confidence 689999997 7899999999999999999998987655443
No 410
>PRK07102 short chain dehydrogenase; Provisional
Probab=94.79 E-value=0.07 Score=51.90 Aligned_cols=43 Identities=35% Similarity=0.480 Sum_probs=38.1
Q ss_pred cEEEEEcc-chhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHh
Q 010101 368 KIFVLVGA-GGAGRALAFGAKSRGARVIIFNRNYERAKALADAV 410 (518)
Q Consensus 368 k~vlvlGa-Gg~araia~~L~~~G~~v~i~nRt~~ka~~la~~~ 410 (518)
++++|.|+ ||.|++++..|.+.|++|++++|+.++.+++++.+
T Consensus 2 ~~vlItGas~giG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~ 45 (243)
T PRK07102 2 KKILIIGATSDIARACARRYAAAGARLYLAARDVERLERLADDL 45 (243)
T ss_pred cEEEEEcCCcHHHHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHH
Confidence 57999986 88999999999999999999999999887776654
No 411
>PF02558 ApbA: Ketopantoate reductase PanE/ApbA; InterPro: IPR013332 ApbA, the ketopantoate reductase enzyme 1.1.1.169 from EC of Salmonella typhimurium is required for the synthesis of thiamine via the alternative pyrimidine biosynthetic pathway []. Precursors to the pyrimidine moiety of thiamine are synthesized de novo by the purine biosynthetic pathway or the alternative pyrimidine biosynthetic (APB) pathway. The ApbA protein catalyzes the NADPH-specific reduction of ketopantoic acid to pantoic acid. This activity had previously been associated with the pantothenate biosynthetic gene panE []. ApbA and PanE are allelic [].; GO: 0008677 2-dehydropantoate 2-reductase activity, 0055114 oxidation-reduction process; PDB: 3EGO_B 3HWR_B 2QYT_A 1YJQ_A 1KS9_A 2OFP_A 1YON_A 3G17_E 3GHY_B 3I83_B ....
Probab=94.78 E-value=0.061 Score=48.50 Aligned_cols=38 Identities=26% Similarity=0.467 Sum_probs=34.4
Q ss_pred EEEEccchhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHH
Q 010101 370 FVLVGAGGAGRALAFGAKSRGARVIIFNRNYERAKALAD 408 (518)
Q Consensus 370 vlvlGaGg~araia~~L~~~G~~v~i~nRt~~ka~~la~ 408 (518)
++|+|+|.+|...++.|++.|.+|+++.|.. +++++.+
T Consensus 1 I~I~G~GaiG~~~a~~L~~~g~~V~l~~r~~-~~~~~~~ 38 (151)
T PF02558_consen 1 ILIIGAGAIGSLYAARLAQAGHDVTLVSRSP-RLEAIKE 38 (151)
T ss_dssp EEEESTSHHHHHHHHHHHHTTCEEEEEESHH-HHHHHHH
T ss_pred CEEECcCHHHHHHHHHHHHCCCceEEEEccc-cHHhhhh
Confidence 6899999999999999999999999999998 8777644
No 412
>PRK12936 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed
Probab=94.77 E-value=0.078 Score=51.32 Aligned_cols=74 Identities=26% Similarity=0.335 Sum_probs=53.5
Q ss_pred cCCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHhcCcc----ccccc---cccc------CCCCccE
Q 010101 365 IAGKIFVLVGA-GGAGRALAFGAKSRGARVIIFNRNYERAKALADAVSGEA----LHFEY---LHEF------FPEKGMI 430 (518)
Q Consensus 365 l~~k~vlvlGa-Gg~araia~~L~~~G~~v~i~nRt~~ka~~la~~~~~~~----~~~~~---l~~~------~~~~~di 430 (518)
+++++++|.|+ |+.|++++..|.+.|+.|.+.+|+.++.+++.+.++... .++.+ +... .....|+
T Consensus 4 ~~~~~vlItGa~g~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~ 83 (245)
T PRK12936 4 LSGRKALVTGASGGIGEEIARLLHAQGAIVGLHGTRVEKLEALAAELGERVKIFPANLSDRDEVKALGQKAEADLEGVDI 83 (245)
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence 46789999996 789999999999999999999999999888877654321 11111 1110 1245799
Q ss_pred EEEcCCCC
Q 010101 431 LANASAIG 438 (518)
Q Consensus 431 vInatp~g 438 (518)
||++....
T Consensus 84 vi~~ag~~ 91 (245)
T PRK12936 84 LVNNAGIT 91 (245)
T ss_pred EEECCCCC
Confidence 99997653
No 413
>COG1179 Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 1 [Coenzyme metabolism]
Probab=94.76 E-value=0.053 Score=52.75 Aligned_cols=34 Identities=21% Similarity=0.362 Sum_probs=30.8
Q ss_pred cCCcEEEEEccchhHHHHHHHHHHCCC-eEEEEeC
Q 010101 365 IAGKIFVLVGAGGAGRALAFGAKSRGA-RVIIFNR 398 (518)
Q Consensus 365 l~~k~vlvlGaGg~araia~~L~~~G~-~v~i~nR 398 (518)
+++.+|+|+|.||+|.-++.+|++-|+ +|++++-
T Consensus 28 l~~~~V~VvGiGGVGSw~veALaRsGig~itlID~ 62 (263)
T COG1179 28 LKQAHVCVVGIGGVGSWAVEALARSGIGRITLIDM 62 (263)
T ss_pred HhhCcEEEEecCchhHHHHHHHHHcCCCeEEEEec
Confidence 567899999999999999999999999 8888764
No 414
>PRK05565 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=94.74 E-value=0.076 Score=51.44 Aligned_cols=46 Identities=39% Similarity=0.615 Sum_probs=39.9
Q ss_pred cCCcEEEEEcc-chhHHHHHHHHHHCCCeEEEE-eCCHHHHHHHHHHh
Q 010101 365 IAGKIFVLVGA-GGAGRALAFGAKSRGARVIIF-NRNYERAKALADAV 410 (518)
Q Consensus 365 l~~k~vlvlGa-Gg~araia~~L~~~G~~v~i~-nRt~~ka~~la~~~ 410 (518)
+.+++++|+|+ |+.|+.++..|.+.|++|+++ +|+.++.+++.+.+
T Consensus 3 ~~~~~ilI~Gasg~iG~~la~~l~~~g~~v~~~~~r~~~~~~~~~~~~ 50 (247)
T PRK05565 3 LMGKVAIVTGASGGIGRAIAELLAKEGAKVVIAYDINEEAAQELLEEI 50 (247)
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHH
Confidence 56789999987 899999999999999998888 99988887776654
No 415
>PLN02730 enoyl-[acyl-carrier-protein] reductase
Probab=94.70 E-value=0.053 Score=55.32 Aligned_cols=47 Identities=19% Similarity=0.317 Sum_probs=39.4
Q ss_pred cccCCcEEEEEcc---chhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHh
Q 010101 363 SPIAGKIFVLVGA---GGAGRALAFGAKSRGARVIIFNRNYERAKALADAV 410 (518)
Q Consensus 363 ~~l~~k~vlvlGa---Gg~araia~~L~~~G~~v~i~nRt~~ka~~la~~~ 410 (518)
.+++||.++|.|+ .|.|++++..|++.|++|.+ .|+.++.++++..+
T Consensus 5 ~~l~gk~alITGa~~s~GIG~a~A~~la~~Ga~Vv~-~~~~~~l~~~~~~~ 54 (303)
T PLN02730 5 IDLRGKRAFIAGVADDNGYGWAIAKALAAAGAEILV-GTWVPALNIFETSL 54 (303)
T ss_pred cCCCCCEEEEeCCCCCCcHHHHHHHHHHHCCCEEEE-EeCcchhhHHHHhh
Confidence 3588999999999 89999999999999999988 78777766665433
No 416
>KOG1205 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]
Probab=94.65 E-value=0.054 Score=54.38 Aligned_cols=77 Identities=27% Similarity=0.459 Sum_probs=55.9
Q ss_pred cccCCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHhcC----c-c----cccccccc---------c
Q 010101 363 SPIAGKIFVLVGA-GGAGRALAFGAKSRGARVIIFNRNYERAKALADAVSG----E-A----LHFEYLHE---------F 423 (518)
Q Consensus 363 ~~l~~k~vlvlGa-Gg~araia~~L~~~G~~v~i~nRt~~ka~~la~~~~~----~-~----~~~~~l~~---------~ 423 (518)
..+.||.|+|-|| .|.|++.|+.|++.|+++.++.|..++.+.+++++.. + . .++.+.++ .
T Consensus 8 e~~~~kvVvITGASsGIG~~lA~~la~~G~~l~lvar~~rrl~~v~~~l~~~~~~~~v~~~~~Dvs~~~~~~~~~~~~~~ 87 (282)
T KOG1205|consen 8 ERLAGKVVLITGASSGIGEALAYELAKRGAKLVLVARRARRLERVAEELRKLGSLEKVLVLQLDVSDEESVKKFVEWAIR 87 (282)
T ss_pred HHhCCCEEEEeCCCcHHHHHHHHHHHhCCCceEEeehhhhhHHHHHHHHHHhCCcCccEEEeCccCCHHHHHHHHHHHHH
Confidence 3567899999999 5999999999999999999999988888887665532 2 1 12222111 1
Q ss_pred CCCCccEEEEcCCCCC
Q 010101 424 FPEKGMILANASAIGM 439 (518)
Q Consensus 424 ~~~~~divInatp~g~ 439 (518)
...+.|++||....+.
T Consensus 88 ~fg~vDvLVNNAG~~~ 103 (282)
T KOG1205|consen 88 HFGRVDVLVNNAGISL 103 (282)
T ss_pred hcCCCCEEEecCcccc
Confidence 3567899999776553
No 417
>PRK08017 oxidoreductase; Provisional
Probab=94.64 E-value=0.07 Score=52.16 Aligned_cols=40 Identities=28% Similarity=0.414 Sum_probs=36.1
Q ss_pred cEEEEEcc-chhHHHHHHHHHHCCCeEEEEeCCHHHHHHHH
Q 010101 368 KIFVLVGA-GGAGRALAFGAKSRGARVIIFNRNYERAKALA 407 (518)
Q Consensus 368 k~vlvlGa-Gg~araia~~L~~~G~~v~i~nRt~~ka~~la 407 (518)
++++|+|+ |+.|++++..|.+.|++|.++.|+.++.+.+.
T Consensus 3 k~vlVtGasg~IG~~la~~l~~~g~~v~~~~r~~~~~~~~~ 43 (256)
T PRK08017 3 KSVLITGCSSGIGLEAALELKRRGYRVLAACRKPDDVARMN 43 (256)
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHhHHHH
Confidence 57999998 99999999999999999999999998876654
No 418
>PRK00043 thiE thiamine-phosphate pyrophosphorylase; Reviewed
Probab=94.63 E-value=1.5 Score=41.84 Aligned_cols=123 Identities=18% Similarity=0.181 Sum_probs=68.8
Q ss_pred cccCCceEEEeecCCCH---HHHHHHHHHHHhhCCCEEEEEeccCCC-CcHHHHH---HHhcCCCCcEEEEeecCCCCCC
Q 010101 4 AAKNSLLVCTQLECETT---EEMQASIEQAKVEGADLVELCIDSMEF-SHISEVD---KLIQHPTLPAIVSYRLKSSRKS 76 (518)
Q Consensus 4 ~~~~~~~icv~l~~~~~---~~~~~~~~~~~~~g~D~vElRlD~l~~-~~~~~l~---~l~~~~~~PiI~T~R~~~eGG~ 76 (518)
|+...|.+. .||.+.. .+..+.++.+.+.|+|++++|.=.+.. ...+.+. .+....+.|++..
T Consensus 2 ~~~~~~~~~-~it~~~~~~~~~~~~~~~~~~~~gv~~v~lr~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--------- 71 (212)
T PRK00043 2 MMMKLLRLY-LITDSRDDSGRDLLEVVEAALEGGVTLVQLREKGLDTRERLELARALKELCRRYGVPLIVN--------- 71 (212)
T ss_pred CCCCCCCEE-EEECCcccccccHHHHHHHHHhcCCCEEEEeCCCCCHHHHHHHHHHHHHHHHHhCCeEEEe---------
Confidence 444545543 2333322 446666777778899999999754441 1111222 2323456777752
Q ss_pred CCCCcHHHHHHHHHHHhhcCCcEEEEecCCCCchhhHHHhhcCCCcEEEEeeecCCCCCCChhHHHHHHHHHHHcCCCEE
Q 010101 77 SDEACKNTCLQVLRRALDLDVEFVEMDYEVASDPLMSEIIYSRSNTKIIVSSYLNGGGKPTTEKLGDVIACMQATGADVM 156 (518)
Q Consensus 77 ~~~~~~~~~~~ll~~~~~~g~~yvDiEl~~~~~~~~~l~~~~~~~~kiI~S~H~f~~~tp~~~~l~~~~~~~~~~gadiv 156 (518)
+ .++.+.+.|+++|=+...... ...+...+..+.++-+|-|+. +| ..++...|+|++
T Consensus 72 ---~-------~~~~a~~~gad~vh~~~~~~~--~~~~~~~~~~~~~~g~~~~t~-------~e----~~~a~~~gaD~v 128 (212)
T PRK00043 72 ---D-------RVDLALAVGADGVHLGQDDLP--VADARALLGPDAIIGLSTHTL-------EE----AAAALAAGADYV 128 (212)
T ss_pred ---C-------hHHHHHHcCCCEEecCcccCC--HHHHHHHcCCCCEEEEeCCCH-------HH----HHHHhHcCCCEE
Confidence 1 245667789998777554322 122222234566777777732 23 344447899999
Q ss_pred EEE
Q 010101 157 KLE 159 (518)
Q Consensus 157 Kia 159 (518)
++-
T Consensus 129 ~~~ 131 (212)
T PRK00043 129 GVG 131 (212)
T ss_pred EEC
Confidence 983
No 419
>PRK14851 hypothetical protein; Provisional
Probab=94.63 E-value=0.052 Score=61.24 Aligned_cols=35 Identities=23% Similarity=0.319 Sum_probs=32.0
Q ss_pred cCCcEEEEEccchhHHHHHHHHHHCCC-eEEEEeCC
Q 010101 365 IAGKIFVLVGAGGAGRALAFGAKSRGA-RVIIFNRN 399 (518)
Q Consensus 365 l~~k~vlvlGaGg~araia~~L~~~G~-~v~i~nRt 399 (518)
+++++|+|+|+||.|..++..|+..|+ +++|++.+
T Consensus 41 L~~~~VlIvG~GGlGs~va~~Lar~GVG~l~LvD~D 76 (679)
T PRK14851 41 LAEAKVAIPGMGGVGGVHLITMVRTGIGRFHIADFD 76 (679)
T ss_pred HhcCeEEEECcCHHHHHHHHHHHHhCCCeEEEEcCC
Confidence 457899999999999999999999999 99998854
No 420
>COG3967 DltE Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) [Cell envelope biogenesis, outer membrane]
Probab=94.62 E-value=0.12 Score=49.20 Aligned_cols=73 Identities=27% Similarity=0.279 Sum_probs=52.1
Q ss_pred cCCcEEEEEccc-hhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHhcC---ccccccccc------cc---CCCCccEE
Q 010101 365 IAGKIFVLVGAG-GAGRALAFGAKSRGARVIIFNRNYERAKALADAVSG---EALHFEYLH------EF---FPEKGMIL 431 (518)
Q Consensus 365 l~~k~vlvlGaG-g~araia~~L~~~G~~v~i~nRt~~ka~~la~~~~~---~~~~~~~l~------~~---~~~~~div 431 (518)
+.|-++||-|.| |.|++.+..+.++|-+|.|++|+.++.++..+.... ..+++.|.. +. .-.+-+++
T Consensus 3 ~tgnTiLITGG~sGIGl~lak~f~elgN~VIi~gR~e~~L~e~~~~~p~~~t~v~Dv~d~~~~~~lvewLkk~~P~lNvl 82 (245)
T COG3967 3 TTGNTILITGGASGIGLALAKRFLELGNTVIICGRNEERLAEAKAENPEIHTEVCDVADRDSRRELVEWLKKEYPNLNVL 82 (245)
T ss_pred ccCcEEEEeCCcchhhHHHHHHHHHhCCEEEEecCcHHHHHHHHhcCcchheeeecccchhhHHHHHHHHHhhCCchhee
Confidence 346789999765 899999999999999999999999998877655432 122332221 10 23456899
Q ss_pred EEcCCC
Q 010101 432 ANASAI 437 (518)
Q Consensus 432 Inatp~ 437 (518)
||+...
T Consensus 83 iNNAGI 88 (245)
T COG3967 83 INNAGI 88 (245)
T ss_pred eecccc
Confidence 998754
No 421
>PRK12331 oxaloacetate decarboxylase; Provisional
Probab=94.61 E-value=3 Score=44.97 Aligned_cols=207 Identities=14% Similarity=0.129 Sum_probs=124.3
Q ss_pred HHHHHHHHHHHHhhCCCEEEEE----ecc----CCCCcHHHHHHHhcC-CCCcEEEEeecCCCCCCCCCCcHHHHHHHHH
Q 010101 20 TEEMQASIEQAKVEGADLVELC----IDS----MEFSHISEVDKLIQH-PTLPAIVSYRLKSSRKSSDEACKNTCLQVLR 90 (518)
Q Consensus 20 ~~~~~~~~~~~~~~g~D~vElR----lD~----l~~~~~~~l~~l~~~-~~~PiI~T~R~~~eGG~~~~~~~~~~~~ll~ 90 (518)
.++.+.-++..-+.|.+.||.- .|. +..++.+.++.+++. .+.++..-+|..+-=|..+-+ ++...+.++
T Consensus 25 t~dkl~ia~~Ld~~Gv~~IE~~ggatf~~~~~f~~e~p~e~l~~l~~~~~~~~l~~l~r~~N~~G~~~~p-ddvv~~~v~ 103 (448)
T PRK12331 25 TEEMLPILEKLDNAGYHSLEMWGGATFDACLRFLNEDPWERLRKIRKAVKKTKLQMLLRGQNLLGYRNYA-DDVVESFVQ 103 (448)
T ss_pred HHHHHHHHHHHHHcCCCEEEecCCccchhhhccCCCCHHHHHHHHHHhCCCCEEEEEeccccccccccCc-hhhHHHHHH
Confidence 3344444444445799999995 553 225667778888765 467776667876666664444 667778899
Q ss_pred HHhhcCCcEEEEecCCCC-chhhHHHh-hcCCCcEEE--EeeecCCCCCCChhHHHHHHHHHHHcCCCEEEEEcccC--C
Q 010101 91 RALDLDVEFVEMDYEVAS-DPLMSEII-YSRSNTKII--VSSYLNGGGKPTTEKLGDVIACMQATGADVMKLEIAVD--S 164 (518)
Q Consensus 91 ~~~~~g~~yvDiEl~~~~-~~~~~l~~-~~~~~~kiI--~S~H~f~~~tp~~~~l~~~~~~~~~~gadivKia~~~~--~ 164 (518)
.+++.|++.|-|=....+ +-+....+ ++..+..+. +||-+ ...-+.+.+.++.+++.+.|+|.+-|+=|+- +
T Consensus 104 ~A~~~Gvd~irif~~lnd~~n~~~~v~~ak~~G~~v~~~i~~t~--~p~~~~~~~~~~a~~l~~~Gad~I~i~Dt~G~l~ 181 (448)
T PRK12331 104 KSVENGIDIIRIFDALNDVRNLETAVKATKKAGGHAQVAISYTT--SPVHTIDYFVKLAKEMQEMGADSICIKDMAGILT 181 (448)
T ss_pred HHHHCCCCEEEEEEecCcHHHHHHHHHHHHHcCCeEEEEEEeec--CCCCCHHHHHHHHHHHHHcCCCEEEEcCCCCCCC
Confidence 999999999887765432 11222233 444454443 45443 2112567889999999999999999987775 5
Q ss_pred cccHHHHHHHhcc-CCCCEEEE--ecCCccchhhhcCCCCCCcccccccCC-CCCCCCCCHHHHHHHhh
Q 010101 165 ITDLAPVFEMLTH-CQVPLIAL--AVGSRGLISQLLGPKFGGFLVYGSLGG-KSVPGLPTLVSLKQVYQ 229 (518)
Q Consensus 165 ~~D~~~l~~~~~~-~~~p~i~~--~mG~~G~~sRi~~~~~gs~~ty~~~~~-~sApGQ~~~~~l~~~~~ 229 (518)
+.++.++.+.+++ .+.|+-.= +.--+|..+-+.+-..|....-+++.+ +.-.||++.+++...++
T Consensus 182 P~~v~~lv~alk~~~~~pi~~H~Hnt~GlA~AN~laAieaGad~vD~sv~glg~gaGN~~tE~lv~~L~ 250 (448)
T PRK12331 182 PYVAYELVKRIKEAVTVPLEVHTHATSGIAEMTYLKAIEAGADIIDTAISPFAGGTSQPATESMVAALQ 250 (448)
T ss_pred HHHHHHHHHHHHHhcCCeEEEEecCCCCcHHHHHHHHHHcCCCEEEeeccccCCCcCCHhHHHHHHHHH
Confidence 7888888877643 24443210 011122233333333454444444432 12367777777765553
No 422
>PRK12862 malic enzyme; Reviewed
Probab=94.60 E-value=0.25 Score=56.45 Aligned_cols=174 Identities=19% Similarity=0.185 Sum_probs=97.9
Q ss_pred CcHHHHHHHh--cCCCCCEEEecccchHHHHhcccccChhhhhcCceeEEEEeccCCeEEEeecC-HHHHHHHHHHHHHh
Q 010101 275 DDVKEFFRTY--SGTDFAGFSVGIPHKEPAVACCDEVHPLAKSIGAVNTIIRRPIDGKLVGYNTD-CESAISAIEDALRE 351 (518)
Q Consensus 275 ~~l~~~~~~l--~~~~~~G~~VT~P~K~~v~~~~d~~~~~A~~iGavNTi~~~~~~g~l~G~NTD-~~G~~~~l~~~l~~ 351 (518)
+|-++|++.. ..+.|+|+|.-==-..+.+..++.+- ...|.-++. |. .+|+-.= ..|++++++-
T Consensus 120 ~d~d~~v~~v~~~~p~f~~i~~ED~~~~~~f~i~~~~~------~~~~ip~f~--DD-~~GTa~v~la~l~~a~~~---- 186 (763)
T PRK12862 120 SDPDKLVEIVAALEPTFGGINLEDIKAPECFYIERELR------ERMKIPVFH--DD-QHGTAIIVAAALLNGLKL---- 186 (763)
T ss_pred CCHHHHHHHHHHhCCCcceeeeecccCchHHHHHHHHH------hcCCCceEe--cC-cccHHHHHHHHHHHHHHH----
Confidence 4666676655 35789998753211222333333222 122333444 22 4444322 2345555442
Q ss_pred hccCCCCCCCCcccCCcEEEEEccchhHHHHHHHHHHCCC---eEEEEeCC--------H--H-HHHHHHHHhcCccccc
Q 010101 352 RQGINGVASHTSPIAGKIFVLVGAGGAGRALAFGAKSRGA---RVIIFNRN--------Y--E-RAKALADAVSGEALHF 417 (518)
Q Consensus 352 ~~~~~~~~~~~~~l~~k~vlvlGaGg~araia~~L~~~G~---~v~i~nRt--------~--~-ka~~la~~~~~~~~~~ 417 (518)
.| .+++..+++|.|||.+|-+++..|...|. +|++++|. . . .-+.+|+.. ..
T Consensus 187 -~~--------~~~~~~~iv~~GaGaag~~~a~~l~~~G~~~~~i~~~D~~G~i~~~r~~~l~~~~~~~a~~~-----~~ 252 (763)
T PRK12862 187 -VG--------KDIEDVKLVASGAGAAALACLDLLVSLGVKRENIWVTDIKGVVYEGRTELMDPWKARYAQKT-----DA 252 (763)
T ss_pred -hC--------CChhhcEEEEEChhHHHHHHHHHHHHcCCCcccEEEEcCCCeeeCCCCccccHHHHHHhhhc-----cc
Confidence 12 46788999999999999999999999998 79999942 1 1 122345442 12
Q ss_pred ccccccCCCCccEEEEcCCCCCCCCCCCCCCChhhh---cCCCEEEEEee-CCCchHHHHHHHHC--CCeeeccH
Q 010101 418 EYLHEFFPEKGMILANASAIGMEPNSDQSPVPKEAL---KAYELVFDAVY-TPRNTRLLREAAEV--GATVVSGV 486 (518)
Q Consensus 418 ~~l~~~~~~~~divInatp~g~~~~~~~~~~~~~~l---~~~~~v~Di~Y-~P~~T~ll~~A~~~--G~~~i~G~ 486 (518)
.+|.+ .++.+|++|-++..|. +.++++ .+..++|=+.- .|+-|| ++|.+. |+.+..|.
T Consensus 253 ~~l~e-~~~~~~v~iG~s~~g~--------~~~~~v~~M~~~piifalsNP~~E~~p--~~a~~~~~~~i~atGr 316 (763)
T PRK12862 253 RTLAE-VIEGADVFLGLSAAGV--------LKPEMVKKMAPRPLIFALANPTPEILP--EEARAVRPDAIIATGR 316 (763)
T ss_pred CCHHH-HHcCCCEEEEcCCCCC--------CCHHHHHHhccCCEEEeCCCCcccCCH--HHHHHhcCCEEEEECC
Confidence 34444 4566899998775332 445544 35678887753 243354 344444 45555564
No 423
>PRK06928 pyrroline-5-carboxylate reductase; Reviewed
Probab=94.59 E-value=0.066 Score=53.87 Aligned_cols=122 Identities=11% Similarity=-0.009 Sum_probs=67.6
Q ss_pred EEEEEccchhHHHHHHHHHHCC----CeEEEEeCCH-HHHHHHHHHhcCcccccccccccCCCCccEEEEcCCCCCCCCC
Q 010101 369 IFVLVGAGGAGRALAFGAKSRG----ARVIIFNRNY-ERAKALADAVSGEALHFEYLHEFFPEKGMILANASAIGMEPNS 443 (518)
Q Consensus 369 ~vlvlGaGg~araia~~L~~~G----~~v~i~nRt~-~ka~~la~~~~~~~~~~~~l~~~~~~~~divInatp~g~~~~~ 443 (518)
++.|||+|-+|.+++..|.+.| .+|++++|+. ++++.+...++.... ..+..+ ...++|+||-|+|.......
T Consensus 3 ~I~iIG~G~mG~ala~~L~~~g~~~~~~V~~~~r~~~~~~~~l~~~~~~~~~-~~~~~e-~~~~aDvVilavpp~~~~~v 80 (277)
T PRK06928 3 KIGFIGYGSMADMIATKLLETEVATPEEIILYSSSKNEHFNQLYDKYPTVEL-ADNEAE-IFTKCDHSFICVPPLAVLPL 80 (277)
T ss_pred EEEEECccHHHHHHHHHHHHCCCCCcccEEEEeCCcHHHHHHHHHHcCCeEE-eCCHHH-HHhhCCEEEEecCHHHHHHH
Confidence 6899999999999999999888 4799999864 556666555421111 122222 23568999999885422110
Q ss_pred CCCCCChhhhcCCCEEEEEeeCCCchHHHHHHHHC-CC-eeeccHHHHHHHHHH
Q 010101 444 DQSPVPKEALKAYELVFDAVYTPRNTRLLREAAEV-GA-TVVSGVEMFIRQALG 495 (518)
Q Consensus 444 ~~~~~~~~~l~~~~~v~Di~Y~P~~T~ll~~A~~~-G~-~~i~G~~ml~~Qa~~ 495 (518)
-. .+ ...+.++..++.+.-. -...-++..-.. .+ ++++-....+.++.-
T Consensus 81 l~-~l-~~~l~~~~~ivS~~aG-i~~~~l~~~~~~~~vvR~MPN~~~~~g~g~t 131 (277)
T PRK06928 81 LK-DC-APVLTPDRHVVSIAAG-VSLDDLLEITPGLQVSRLIPSLTSAVGVGTS 131 (277)
T ss_pred HH-HH-HhhcCCCCEEEEECCC-CCHHHHHHHcCCCCEEEEeCccHHHHhhhcE
Confidence 00 00 0123344555554322 222233333211 22 466766666666543
No 424
>PRK12823 benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional
Probab=94.59 E-value=0.083 Score=51.90 Aligned_cols=46 Identities=37% Similarity=0.629 Sum_probs=37.7
Q ss_pred ccCCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHh
Q 010101 364 PIAGKIFVLVGA-GGAGRALAFGAKSRGARVIIFNRNYERAKALADAV 410 (518)
Q Consensus 364 ~l~~k~vlvlGa-Gg~araia~~L~~~G~~v~i~nRt~~ka~~la~~~ 410 (518)
.+++|+++|.|+ ||.|++++..|.+.|++|.+++|+.. .+++++++
T Consensus 5 ~~~~k~vlVtGas~gIG~~la~~l~~~G~~v~~~~r~~~-~~~~~~~~ 51 (260)
T PRK12823 5 RFAGKVVVVTGAAQGIGRGVALRAAAEGARVVLVDRSEL-VHEVAAEL 51 (260)
T ss_pred ccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCchH-HHHHHHHH
Confidence 467899999988 68999999999999999999999853 34454444
No 425
>PRK06841 short chain dehydrogenase; Provisional
Probab=94.58 E-value=0.086 Score=51.55 Aligned_cols=40 Identities=35% Similarity=0.577 Sum_probs=35.9
Q ss_pred ccCCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEeCCHHHH
Q 010101 364 PIAGKIFVLVGA-GGAGRALAFGAKSRGARVIIFNRNYERA 403 (518)
Q Consensus 364 ~l~~k~vlvlGa-Gg~araia~~L~~~G~~v~i~nRt~~ka 403 (518)
++++++++|.|+ ||.|++++..|.+.|++|.+++|+.+..
T Consensus 12 ~~~~k~vlItGas~~IG~~la~~l~~~G~~Vi~~~r~~~~~ 52 (255)
T PRK06841 12 DLSGKVAVVTGGASGIGHAIAELFAAKGARVALLDRSEDVA 52 (255)
T ss_pred CCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHH
Confidence 467899999997 7899999999999999999999997753
No 426
>PRK07791 short chain dehydrogenase; Provisional
Probab=94.56 E-value=0.078 Score=53.36 Aligned_cols=46 Identities=35% Similarity=0.665 Sum_probs=39.1
Q ss_pred cCCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEeCCH---------HHHHHHHHHh
Q 010101 365 IAGKIFVLVGA-GGAGRALAFGAKSRGARVIIFNRNY---------ERAKALADAV 410 (518)
Q Consensus 365 l~~k~vlvlGa-Gg~araia~~L~~~G~~v~i~nRt~---------~ka~~la~~~ 410 (518)
+++|+++|.|+ +|.|++++..|++.|++|.+++|+. ++++++++++
T Consensus 4 l~~k~~lITGas~GIG~aia~~la~~G~~vii~~~~~~~~~~~~~~~~~~~~~~~l 59 (286)
T PRK07791 4 LDGRVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSASGGSAAQAVVDEI 59 (286)
T ss_pred cCCCEEEEECCCchHHHHHHHHHHHCCCEEEEeeCCccccccccchhHHHHHHHHH
Confidence 46899999988 5899999999999999999998876 6777776665
No 427
>PRK10538 malonic semialdehyde reductase; Provisional
Probab=94.55 E-value=0.087 Score=51.52 Aligned_cols=70 Identities=24% Similarity=0.350 Sum_probs=50.5
Q ss_pred EEEEEcc-chhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHhcCcc----ccccc---cccc------CCCCccEEEEc
Q 010101 369 IFVLVGA-GGAGRALAFGAKSRGARVIIFNRNYERAKALADAVSGEA----LHFEY---LHEF------FPEKGMILANA 434 (518)
Q Consensus 369 ~vlvlGa-Gg~araia~~L~~~G~~v~i~nRt~~ka~~la~~~~~~~----~~~~~---l~~~------~~~~~divIna 434 (518)
+++|+|+ ||.|++++..|.+.|++|.+++|+.++++++.+.++... .++.+ +... .....|++|++
T Consensus 2 ~vlItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~~~id~vi~~ 81 (248)
T PRK10538 2 IVLVTGATAGFGECITRRFIQQGHKVIATGRRQERLQELKDELGDNLYIAQLDVRNRAAIEEMLASLPAEWRNIDVLVNN 81 (248)
T ss_pred EEEEECCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhccceEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEEC
Confidence 6899987 789999999999999999999999999888877654321 11211 1110 12357999998
Q ss_pred CCCC
Q 010101 435 SAIG 438 (518)
Q Consensus 435 tp~g 438 (518)
....
T Consensus 82 ag~~ 85 (248)
T PRK10538 82 AGLA 85 (248)
T ss_pred CCcc
Confidence 7643
No 428
>TIGR01108 oadA oxaloacetate decarboxylase alpha subunit. This model describes the bacterial oxaloacetate decarboxylase alpha subunit and its equivalents in archaea. The oxaloacetate decarboxylase Na+ pump is the paradigm of the family of Na+ transport decarboxylases that present in bacteria and archaea. It a multi subunit enzyme consisting of a peripheral alpha-subunit and integral membrane subunits beta and gamma. The energy released by the decarboxylation reaction of oxaloacetate is coupled to Na+ ion pumping across the membrane.
Probab=94.52 E-value=2.8 Score=46.72 Aligned_cols=208 Identities=13% Similarity=0.101 Sum_probs=131.8
Q ss_pred CHHHHHHHHHHHHhhCCCEEEEE----ecc----CCCCcHHHHHHHhc-CCCCcEEEEeecCCCCCCCCCCcHHHHHHHH
Q 010101 19 TTEEMQASIEQAKVEGADLVELC----IDS----MEFSHISEVDKLIQ-HPTLPAIVSYRLKSSRKSSDEACKNTCLQVL 89 (518)
Q Consensus 19 ~~~~~~~~~~~~~~~g~D~vElR----lD~----l~~~~~~~l~~l~~-~~~~PiI~T~R~~~eGG~~~~~~~~~~~~ll 89 (518)
+.++.+.-++...+.|.+.+|.- .|. +..++.+.++.+++ ..+.++..-+|..+-=|..+-. ++...+.+
T Consensus 19 ~t~dkl~ia~~L~~~Gv~~IE~~GGatfd~~~~f~~e~~~e~l~~l~~~~~~~~l~~L~Rg~N~~G~~~yp-ddvv~~~v 97 (582)
T TIGR01108 19 RTEDMLPIAEKLDDVGYWSLEVWGGATFDACIRFLNEDPWERLRELKKALPNTPLQMLLRGQNLLGYRHYA-DDVVERFV 97 (582)
T ss_pred CHHHHHHHHHHHHHcCCCEEEecCCcccccccccCCCCHHHHHHHHHHhCCCCEEEEEEccccccccccCc-hhhHHHHH
Confidence 34444444444455799999995 663 23567777888876 3568888888966666654444 56677788
Q ss_pred HHHhhcCCcEEEEecCCCC--chhhHHHhhcCCCcEEEEeeecCCCCCC--ChhHHHHHHHHHHHcCCCEEEEEcccC--
Q 010101 90 RRALDLDVEFVEMDYEVAS--DPLMSEIIYSRSNTKIIVSSYLNGGGKP--TTEKLGDVIACMQATGADVMKLEIAVD-- 163 (518)
Q Consensus 90 ~~~~~~g~~yvDiEl~~~~--~~~~~l~~~~~~~~kiI~S~H~f~~~tp--~~~~l~~~~~~~~~~gadivKia~~~~-- 163 (518)
+.+.+.|++.+-|=....+ .....+..++..+..+.++.-. ..+| +.+.+.++.+++.+.|||.+-|+=|+-
T Consensus 98 ~~a~~~Gvd~irif~~lnd~~n~~~~i~~ak~~G~~v~~~i~~--t~~p~~~~~~~~~~~~~~~~~Gad~I~i~Dt~G~~ 175 (582)
T TIGR01108 98 KKAVENGMDVFRIFDALNDPRNLQAAIQAAKKHGAHAQGTISY--TTSPVHTLETYLDLAEELLEMGVDSICIKDMAGIL 175 (582)
T ss_pred HHHHHCCCCEEEEEEecCcHHHHHHHHHHHHHcCCEEEEEEEe--ccCCCCCHHHHHHHHHHHHHcCCCEEEECCCCCCc
Confidence 9999999998777654432 1222222244455666654321 2255 667899999999999999998887764
Q ss_pred CcccHHHHHHHhcc-CCCCEEEE---ecCCccchhhhcCCCCCCcccccccCC-CCCCCCCCHHHHHHHhhh
Q 010101 164 SITDLAPVFEMLTH-CQVPLIAL---AVGSRGLISQLLGPKFGGFLVYGSLGG-KSVPGLPTLVSLKQVYQL 230 (518)
Q Consensus 164 ~~~D~~~l~~~~~~-~~~p~i~~---~mG~~G~~sRi~~~~~gs~~ty~~~~~-~sApGQ~~~~~l~~~~~~ 230 (518)
++.++.++.+.++. .+.|+ .+ +.--++..+-+.+-..|....-+++.+ +...||++++++...++.
T Consensus 176 ~P~~v~~lv~~lk~~~~~pi-~~H~Hnt~Gla~An~laAveaGa~~vd~ai~GlG~~tGn~~le~vv~~L~~ 246 (582)
T TIGR01108 176 TPKAAYELVSALKKRFGLPV-HLHSHATTGMAEMALLKAIEAGADGIDTAISSMSGGTSHPPTETMVAALRG 246 (582)
T ss_pred CHHHHHHHHHHHHHhCCCce-EEEecCCCCcHHHHHHHHHHhCCCEEEeccccccccccChhHHHHHHHHHh
Confidence 57888888776543 24443 22 112223333444444465555555543 357999999998877653
No 429
>PRK05579 bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Validated
Probab=94.50 E-value=0.19 Score=53.31 Aligned_cols=116 Identities=25% Similarity=0.291 Sum_probs=68.5
Q ss_pred EeecCHHHHHHHHHHHHHhhccCCCCCCCCcccCCcEEEEEcc-----------------chhHHHHHHHHHHCCCeEEE
Q 010101 333 GYNTDCESAISAIEDALRERQGINGVASHTSPIAGKIFVLVGA-----------------GGAGRALAFGAKSRGARVII 395 (518)
Q Consensus 333 G~NTD~~G~~~~l~~~l~~~~~~~~~~~~~~~l~~k~vlvlGa-----------------Gg~araia~~L~~~G~~v~i 395 (518)
|---|..-++..+++.+.. .+++|++++|.|+ |.+|++++.+|...|++|++
T Consensus 165 gr~~~~~~I~~~~~~~~~~-----------~~l~gk~vlITgG~T~E~ID~VR~isN~SSG~~G~aiA~~l~~~Ga~V~~ 233 (399)
T PRK05579 165 GRMAEPEEIVAAAERALSP-----------KDLAGKRVLITAGPTREPIDPVRYITNRSSGKMGYALARAAARRGADVTL 233 (399)
T ss_pred CCCCCHHHHHHHHHHHhhh-----------cccCCCEEEEeCCCccccccceeeeccCCcchHHHHHHHHHHHCCCEEEE
Confidence 3455666666666554431 3478999999987 56999999999999999999
Q ss_pred EeCCHHHHHHHHHHhcCcccccc---cc----cccCCCCccEEEEcCCCCCCCCCCCCCCChhhhcCC--CEEEEEeeCC
Q 010101 396 FNRNYERAKALADAVSGEALHFE---YL----HEFFPEKGMILANASAIGMEPNSDQSPVPKEALKAY--ELVFDAVYTP 466 (518)
Q Consensus 396 ~nRt~~ka~~la~~~~~~~~~~~---~l----~~~~~~~~divInatp~g~~~~~~~~~~~~~~l~~~--~~v~Di~Y~P 466 (518)
++|+.+ .+. ..+...+++. ++ .+ .....|++|++..++.+. ... .....+++. .+.+++.-+|
T Consensus 234 v~~~~~-~~~---~~~~~~~dv~~~~~~~~~v~~-~~~~~DilI~~Aav~d~~--~~~-~~~~Kikk~~~~~~l~L~~~p 305 (399)
T PRK05579 234 VSGPVN-LPT---PAGVKRIDVESAQEMLDAVLA-ALPQADIFIMAAAVADYR--PAT-VAEGKIKKGEGELTLELVPNP 305 (399)
T ss_pred eCCCcc-ccC---CCCcEEEccCCHHHHHHHHHH-hcCCCCEEEEcccccccc--ccc-ccccCccCCCCCceEEEEeCc
Confidence 998752 110 0011111221 11 11 235689999987654321 111 112233332 3567777766
Q ss_pred C
Q 010101 467 R 467 (518)
Q Consensus 467 ~ 467 (518)
.
T Consensus 306 d 306 (399)
T PRK05579 306 D 306 (399)
T ss_pred H
Confidence 4
No 430
>PRK07792 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=94.47 E-value=0.1 Score=53.01 Aligned_cols=48 Identities=33% Similarity=0.513 Sum_probs=39.9
Q ss_pred cccCCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEeCC-HHHHHHHHHHh
Q 010101 363 SPIAGKIFVLVGA-GGAGRALAFGAKSRGARVIIFNRN-YERAKALADAV 410 (518)
Q Consensus 363 ~~l~~k~vlvlGa-Gg~araia~~L~~~G~~v~i~nRt-~~ka~~la~~~ 410 (518)
..+++|+++|.|+ ||.|++++..|.+.|++|.+.+|. .++++++++++
T Consensus 8 ~~l~~k~~lVTGas~gIG~~ia~~L~~~Ga~Vv~~~~~~~~~~~~~~~~i 57 (306)
T PRK07792 8 TDLSGKVAVVTGAAAGLGRAEALGLARLGATVVVNDVASALDASDVLDEI 57 (306)
T ss_pred cCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCchhHHHHHHHHH
Confidence 5688999999998 579999999999999999998874 45666666655
No 431
>PRK07806 short chain dehydrogenase; Provisional
Probab=94.45 E-value=0.092 Score=51.13 Aligned_cols=46 Identities=26% Similarity=0.385 Sum_probs=37.6
Q ss_pred cCCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEeCCH-HHHHHHHHHh
Q 010101 365 IAGKIFVLVGA-GGAGRALAFGAKSRGARVIIFNRNY-ERAKALADAV 410 (518)
Q Consensus 365 l~~k~vlvlGa-Gg~araia~~L~~~G~~v~i~nRt~-~ka~~la~~~ 410 (518)
+++++++|.|+ ||.|++++..|.+.|++|+++.|+. ++.+.+++.+
T Consensus 4 ~~~k~vlItGasggiG~~l~~~l~~~G~~V~~~~r~~~~~~~~~~~~l 51 (248)
T PRK07806 4 LPGKTALVTGSSRGIGADTAKILAGAGAHVVVNYRQKAPRANKVVAEI 51 (248)
T ss_pred CCCcEEEEECCCCcHHHHHHHHHHHCCCEEEEEeCCchHhHHHHHHHH
Confidence 46789999997 8899999999999999999999975 3455555444
No 432
>PTZ00117 malate dehydrogenase; Provisional
Probab=94.43 E-value=0.1 Score=53.68 Aligned_cols=71 Identities=11% Similarity=0.141 Sum_probs=50.2
Q ss_pred CCcEEEEEccchhHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHHhcC--c------ccc-cccccccCCCCccEEEEcC
Q 010101 366 AGKIFVLVGAGGAGRALAFGAKSRGA-RVIIFNRNYERAKALADAVSG--E------ALH-FEYLHEFFPEKGMILANAS 435 (518)
Q Consensus 366 ~~k~vlvlGaGg~araia~~L~~~G~-~v~i~nRt~~ka~~la~~~~~--~------~~~-~~~l~~~~~~~~divInat 435 (518)
+.+++.|+|+|.+|.++++.++..|. +|.+++++.++++..+-++.. . .+. ..+.+ ...++|+||.+.
T Consensus 4 ~~~KI~IIGaG~vG~~ia~~l~~~~~~~l~L~Di~~~~~~g~~lDl~~~~~~~~~~~~i~~~~d~~--~l~~ADiVVita 81 (319)
T PTZ00117 4 KRKKISMIGAGQIGSTVALLILQKNLGDVVLYDVIKGVPQGKALDLKHFSTLVGSNINILGTNNYE--DIKDSDVVVITA 81 (319)
T ss_pred CCcEEEEECCCHHHHHHHHHHHHCCCCeEEEEECCCccchhHHHHHhhhccccCCCeEEEeCCCHH--HhCCCCEEEECC
Confidence 45789999999999999999998895 999999998776554432221 0 011 12222 357899999987
Q ss_pred CCC
Q 010101 436 AIG 438 (518)
Q Consensus 436 p~g 438 (518)
..+
T Consensus 82 g~~ 84 (319)
T PTZ00117 82 GVQ 84 (319)
T ss_pred CCC
Confidence 554
No 433
>PRK05225 ketol-acid reductoisomerase; Validated
Probab=94.43 E-value=0.03 Score=59.44 Aligned_cols=71 Identities=17% Similarity=0.173 Sum_probs=51.6
Q ss_pred ccCCcEEEEEccchhHHHHHHHHHHCCCeEEEEeCCH-----HHHHHHHHHhcCcccccccccccCCCCccEEEEcCCCC
Q 010101 364 PIAGKIFVLVGAGGAGRALAFGAKSRGARVIIFNRNY-----ERAKALADAVSGEALHFEYLHEFFPEKGMILANASAIG 438 (518)
Q Consensus 364 ~l~~k~vlvlGaGg~araia~~L~~~G~~v~i~nRt~-----~ka~~la~~~~~~~~~~~~l~~~~~~~~divInatp~g 438 (518)
.++||+|+|||.|-.|++-+..|...|++|+|--|.. ++..+.|..-+... .++.+ .+.++|+|++.+|..
T Consensus 33 ~LkgKtIaIIGyGSqG~AqAlNLrdSGvnVvvglr~~~id~~~~s~~kA~~dGF~v---~~~~E-a~~~ADvVviLlPDt 108 (487)
T PRK05225 33 YLKGKKIVIVGCGAQGLNQGLNMRDSGLDISYALRKEAIAEKRASWRKATENGFKV---GTYEE-LIPQADLVINLTPDK 108 (487)
T ss_pred HhCCCEEEEEccCHHHHHHhCCCccccceeEEeccccccccccchHHHHHhcCCcc---CCHHH-HHHhCCEEEEcCChH
Confidence 4679999999999999999999999999999877764 23333343333322 33333 457799999999854
No 434
>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=94.41 E-value=0.12 Score=55.47 Aligned_cols=74 Identities=30% Similarity=0.361 Sum_probs=51.2
Q ss_pred ccCCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEeCC--HHHHHHHHHHhcCccc--cccc---cccc------CCCCcc
Q 010101 364 PIAGKIFVLVGA-GGAGRALAFGAKSRGARVIIFNRN--YERAKALADAVSGEAL--HFEY---LHEF------FPEKGM 429 (518)
Q Consensus 364 ~l~~k~vlvlGa-Gg~araia~~L~~~G~~v~i~nRt--~~ka~~la~~~~~~~~--~~~~---l~~~------~~~~~d 429 (518)
.+++++++|.|+ ||.|++++..|.+.|++|.+++|. .++.++++++++...+ ++.+ +... .....|
T Consensus 207 ~~~g~~vlItGasggIG~~la~~l~~~Ga~vi~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~id 286 (450)
T PRK08261 207 PLAGKVALVTGAARGIGAAIAEVLARDGAHVVCLDVPAAGEALAAVANRVGGTALALDITAPDAPARIAEHLAERHGGLD 286 (450)
T ss_pred CCCCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHHHHhCCCCC
Confidence 356899999998 899999999999999999999884 4556666666653322 1111 1000 123579
Q ss_pred EEEEcCCC
Q 010101 430 ILANASAI 437 (518)
Q Consensus 430 ivInatp~ 437 (518)
+|||+...
T Consensus 287 ~vi~~AG~ 294 (450)
T PRK08261 287 IVVHNAGI 294 (450)
T ss_pred EEEECCCc
Confidence 99998754
No 435
>PRK06198 short chain dehydrogenase; Provisional
Probab=94.40 E-value=0.094 Score=51.45 Aligned_cols=46 Identities=35% Similarity=0.560 Sum_probs=39.7
Q ss_pred cCCcEEEEEcc-chhHHHHHHHHHHCCCe-EEEEeCCHHHHHHHHHHh
Q 010101 365 IAGKIFVLVGA-GGAGRALAFGAKSRGAR-VIIFNRNYERAKALADAV 410 (518)
Q Consensus 365 l~~k~vlvlGa-Gg~araia~~L~~~G~~-v~i~nRt~~ka~~la~~~ 410 (518)
+++|+++|.|+ |+.|+.++..|.+.|++ |++++|+.++.+.+.+.+
T Consensus 4 ~~~k~vlItGa~g~iG~~la~~l~~~G~~~V~~~~r~~~~~~~~~~~l 51 (260)
T PRK06198 4 LDGKVALVTGGTQGLGAAIARAFAERGAAGLVICGRNAEKGEAQAAEL 51 (260)
T ss_pred CCCcEEEEeCCCchHHHHHHHHHHHCCCCeEEEEcCCHHHHHHHHHHH
Confidence 56899999998 68999999999999996 999999988777666554
No 436
>PRK08936 glucose-1-dehydrogenase; Provisional
Probab=94.40 E-value=0.11 Score=51.14 Aligned_cols=47 Identities=34% Similarity=0.551 Sum_probs=37.8
Q ss_pred ccCCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEeCC-HHHHHHHHHHh
Q 010101 364 PIAGKIFVLVGA-GGAGRALAFGAKSRGARVIIFNRN-YERAKALADAV 410 (518)
Q Consensus 364 ~l~~k~vlvlGa-Gg~araia~~L~~~G~~v~i~nRt-~~ka~~la~~~ 410 (518)
.+++|+++|+|+ ||.|++++..|.+.|++|.++.|+ .+..+.+.+.+
T Consensus 4 ~~~~k~~lItGa~~gIG~~ia~~l~~~G~~vvi~~~~~~~~~~~~~~~l 52 (261)
T PRK08936 4 DLEGKVVVITGGSTGLGRAMAVRFGKEKAKVVINYRSDEEEANDVAEEI 52 (261)
T ss_pred CCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHH
Confidence 467899999987 679999999999999988888884 45555555544
No 437
>PRK06114 short chain dehydrogenase; Provisional
Probab=94.38 E-value=0.11 Score=50.92 Aligned_cols=47 Identities=26% Similarity=0.510 Sum_probs=38.5
Q ss_pred ccCCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEeCCHH-HHHHHHHHh
Q 010101 364 PIAGKIFVLVGA-GGAGRALAFGAKSRGARVIIFNRNYE-RAKALADAV 410 (518)
Q Consensus 364 ~l~~k~vlvlGa-Gg~araia~~L~~~G~~v~i~nRt~~-ka~~la~~~ 410 (518)
++++|+++|.|+ ||.|++++..|.+.|++|.+++|+.+ ..+++++.+
T Consensus 5 ~~~~k~~lVtG~s~gIG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~l 53 (254)
T PRK06114 5 DLDGQVAFVTGAGSGIGQRIAIGLAQAGADVALFDLRTDDGLAETAEHI 53 (254)
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHH
Confidence 467899999987 68999999999999999999999754 445555544
No 438
>PRK07832 short chain dehydrogenase; Provisional
Probab=94.36 E-value=0.097 Score=52.01 Aligned_cols=43 Identities=26% Similarity=0.403 Sum_probs=37.5
Q ss_pred cEEEEEcc-chhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHh
Q 010101 368 KIFVLVGA-GGAGRALAFGAKSRGARVIIFNRNYERAKALADAV 410 (518)
Q Consensus 368 k~vlvlGa-Gg~araia~~L~~~G~~v~i~nRt~~ka~~la~~~ 410 (518)
++++|+|+ ||.|++++..|++.|++|.+++|+.++.+++.+++
T Consensus 1 k~vlItGas~giG~~la~~la~~G~~vv~~~r~~~~~~~~~~~~ 44 (272)
T PRK07832 1 KRCFVTGAASGIGRATALRLAAQGAELFLTDRDADGLAQTVADA 44 (272)
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHH
Confidence 46899987 78999999999999999999999998887776654
No 439
>CHL00194 ycf39 Ycf39; Provisional
Probab=94.32 E-value=0.08 Score=54.07 Aligned_cols=66 Identities=24% Similarity=0.298 Sum_probs=47.4
Q ss_pred EEEEEcc-chhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHhcCccc--ccc---cccccCCCCccEEEEcCC
Q 010101 369 IFVLVGA-GGAGRALAFGAKSRGARVIIFNRNYERAKALADAVSGEAL--HFE---YLHEFFPEKGMILANASA 436 (518)
Q Consensus 369 ~vlvlGa-Gg~araia~~L~~~G~~v~i~nRt~~ka~~la~~~~~~~~--~~~---~l~~~~~~~~divInatp 436 (518)
+++|+|+ |..|+.++.+|.+.|++|+++.|+.+++..+.. .+.+.+ ++. .+.. ...++|.||++.+
T Consensus 2 kIlVtGatG~iG~~lv~~Ll~~g~~V~~l~R~~~~~~~l~~-~~v~~v~~Dl~d~~~l~~-al~g~d~Vi~~~~ 73 (317)
T CHL00194 2 SLLVIGATGTLGRQIVRQALDEGYQVRCLVRNLRKASFLKE-WGAELVYGDLSLPETLPP-SFKGVTAIIDAST 73 (317)
T ss_pred EEEEECCCcHHHHHHHHHHHHCCCeEEEEEcChHHhhhHhh-cCCEEEECCCCCHHHHHH-HHCCCCEEEECCC
Confidence 6899997 789999999999999999999999877654432 232221 222 2222 3567899999864
No 440
>TIGR01963 PHB_DH 3-hydroxybutyrate dehydrogenase. This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species.
Probab=94.31 E-value=0.099 Score=50.93 Aligned_cols=44 Identities=32% Similarity=0.452 Sum_probs=38.8
Q ss_pred CcEEEEEcc-chhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHh
Q 010101 367 GKIFVLVGA-GGAGRALAFGAKSRGARVIIFNRNYERAKALADAV 410 (518)
Q Consensus 367 ~k~vlvlGa-Gg~araia~~L~~~G~~v~i~nRt~~ka~~la~~~ 410 (518)
++++||.|+ |+.|++++..|.+.|++|+++.|+.++.+++.+.+
T Consensus 1 ~~~vlItGa~g~lG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~ 45 (255)
T TIGR01963 1 GKTALVTGAASGIGLAIALALAAAGANVVVNDLGEAGAEAAAKVA 45 (255)
T ss_pred CCEEEEcCCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHH
Confidence 368999996 78999999999999999999999998888877655
No 441
>PRK06181 short chain dehydrogenase; Provisional
Probab=94.31 E-value=0.11 Score=51.21 Aligned_cols=43 Identities=37% Similarity=0.603 Sum_probs=38.1
Q ss_pred cEEEEEcc-chhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHh
Q 010101 368 KIFVLVGA-GGAGRALAFGAKSRGARVIIFNRNYERAKALADAV 410 (518)
Q Consensus 368 k~vlvlGa-Gg~araia~~L~~~G~~v~i~nRt~~ka~~la~~~ 410 (518)
++++|.|+ |+.|++++..|.+.|++|++++|+.++.+++.+.+
T Consensus 2 ~~vlVtGasg~iG~~la~~l~~~g~~Vi~~~r~~~~~~~~~~~l 45 (263)
T PRK06181 2 KVVIITGASEGIGRALAVRLARAGAQLVLAARNETRLASLAQEL 45 (263)
T ss_pred CEEEEecCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHH
Confidence 57999998 78999999999999999999999998887776655
No 442
>cd01484 E1-2_like Ubiquitin activating enzyme (E1), repeat 2-like. E1, a highly conserved small protein present universally in eukaryotic cells, is part of cascade to attach ubiquitin (Ub) covalently to substrate proteins. This cascade consists of activating (E1), conjugating (E2), and/or ligating (E3) enzymes and then targets them for degradation by the 26S proteasome. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and ubiquitin's C-terminus. E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. A set of novel molecules with a structural similarity to Ub, called Ub-like proteins (Ubls), have similar conjugation cascades. In contrast to ubiquitin-E1, which is a single-chain protein with a weakly conserved two-fold repeat, many of the Ubls-E1are a heterodimer where each subunit corresponds to one half of a single-chain E1. This CD represents the family homologou
Probab=94.30 E-value=0.09 Score=51.58 Aligned_cols=32 Identities=28% Similarity=0.408 Sum_probs=29.4
Q ss_pred EEEEEccchhHHHHHHHHHHCCC-eEEEEeCCH
Q 010101 369 IFVLVGAGGAGRALAFGAKSRGA-RVIIFNRNY 400 (518)
Q Consensus 369 ~vlvlGaGg~araia~~L~~~G~-~v~i~nRt~ 400 (518)
+|+|+|+||.|..++..|+..|+ +++|++.+.
T Consensus 1 kVlvvG~GGlG~eilk~La~~Gvg~i~ivD~D~ 33 (234)
T cd01484 1 KVLLVGAGGIGCELLKNLALMGFGQIHVIDMDT 33 (234)
T ss_pred CEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCE
Confidence 48999999999999999999999 999998753
No 443
>PLN02896 cinnamyl-alcohol dehydrogenase
Probab=94.29 E-value=0.12 Score=53.71 Aligned_cols=72 Identities=18% Similarity=0.084 Sum_probs=50.9
Q ss_pred cCCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHhcC----ccc--cccc---ccccCCCCccEEEEc
Q 010101 365 IAGKIFVLVGA-GGAGRALAFGAKSRGARVIIFNRNYERAKALADAVSG----EAL--HFEY---LHEFFPEKGMILANA 434 (518)
Q Consensus 365 l~~k~vlvlGa-Gg~araia~~L~~~G~~v~i~nRt~~ka~~la~~~~~----~~~--~~~~---l~~~~~~~~divIna 434 (518)
..++++||.|+ |..|+.++..|.+.|++|+++.|+.++.+.+...+.. ..+ ++.+ +.+ ...+.|.||++
T Consensus 8 ~~~~~vLVtG~~GfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~-~~~~~d~Vih~ 86 (353)
T PLN02896 8 SATGTYCVTGATGYIGSWLVKLLLQRGYTVHATLRDPAKSLHLLSKWKEGDRLRLFRADLQEEGSFDE-AVKGCDGVFHV 86 (353)
T ss_pred cCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHhhccCCeEEEEECCCCCHHHHHH-HHcCCCEEEEC
Confidence 35789999996 7899999999999999999999998887766554421 111 1111 112 23457999998
Q ss_pred CCC
Q 010101 435 SAI 437 (518)
Q Consensus 435 tp~ 437 (518)
...
T Consensus 87 A~~ 89 (353)
T PLN02896 87 AAS 89 (353)
T ss_pred Ccc
Confidence 754
No 444
>PRK08229 2-dehydropantoate 2-reductase; Provisional
Probab=94.27 E-value=0.11 Score=53.70 Aligned_cols=92 Identities=14% Similarity=0.074 Sum_probs=56.2
Q ss_pred cEEEEEccchhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHhcCccc--------------cc-ccccccCCCCccEEE
Q 010101 368 KIFVLVGAGGAGRALAFGAKSRGARVIIFNRNYERAKALADAVSGEAL--------------HF-EYLHEFFPEKGMILA 432 (518)
Q Consensus 368 k~vlvlGaGg~araia~~L~~~G~~v~i~nRt~~ka~~la~~~~~~~~--------------~~-~~l~~~~~~~~divI 432 (518)
.++.|||+|.+|.+++..|.+.|++|++++|+.. .+.+.+ .+.... .. .+. + ....+|+||
T Consensus 3 mkI~IiG~G~mG~~~A~~L~~~G~~V~~~~r~~~-~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~D~vi 78 (341)
T PRK08229 3 ARICVLGAGSIGCYLGGRLAAAGADVTLIGRARI-GDELRA-HGLTLTDYRGRDVRVPPSAIAFSTDP-A-ALATADLVL 78 (341)
T ss_pred ceEEEECCCHHHHHHHHHHHhcCCcEEEEecHHH-HHHHHh-cCceeecCCCcceecccceeEeccCh-h-hccCCCEEE
Confidence 4699999999999999999999999999999753 344433 121110 00 111 2 345789999
Q ss_pred EcCCCCCCCCCCCCCCC--hhhhcCCCEEEEEeeCCC
Q 010101 433 NASAIGMEPNSDQSPVP--KEALKAYELVFDAVYTPR 467 (518)
Q Consensus 433 natp~g~~~~~~~~~~~--~~~l~~~~~v~Di~Y~P~ 467 (518)
-|++..... . .+. ...+.++.+++++.....
T Consensus 79 l~vk~~~~~---~-~~~~l~~~~~~~~iii~~~nG~~ 111 (341)
T PRK08229 79 VTVKSAATA---D-AAAALAGHARPGAVVVSFQNGVR 111 (341)
T ss_pred EEecCcchH---H-HHHHHHhhCCCCCEEEEeCCCCC
Confidence 988743211 0 011 012355667777754433
No 445
>cd01491 Ube1_repeat1 Ubiquitin activating enzyme (E1), repeat 1. E1, a highly conserved small protein present universally in eukaryotic cells, is part of cascade to attach ubiquitin (Ub) covalently to substrate proteins. This cascade consists of activating (E1), conjugating (E2), and/or ligating (E3) enzymes and then targets them for degradation by the 26S proteasome. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and ubiquitin's C-terminus. E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Ubiquitin-E1 is a single-chain protein with a weakly conserved two-fold repeat. This CD represents the first repeat of Ub-E1.
Probab=94.25 E-value=0.19 Score=50.82 Aligned_cols=36 Identities=19% Similarity=0.302 Sum_probs=32.8
Q ss_pred cCCcEEEEEccchhHHHHHHHHHHCCC-eEEEEeCCH
Q 010101 365 IAGKIFVLVGAGGAGRALAFGAKSRGA-RVIIFNRNY 400 (518)
Q Consensus 365 l~~k~vlvlGaGg~araia~~L~~~G~-~v~i~nRt~ 400 (518)
+.+.+|+|+|+||.|-.++..|+..|+ +|+|++.+.
T Consensus 17 L~~s~VLIvG~gGLG~EiaKnLalaGVg~itI~D~d~ 53 (286)
T cd01491 17 LQKSNVLISGLGGLGVEIAKNLILAGVKSVTLHDTKP 53 (286)
T ss_pred HhcCcEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCCc
Confidence 456899999999999999999999999 999999764
No 446
>COG0240 GpsA Glycerol-3-phosphate dehydrogenase [Energy production and conversion]
Probab=94.24 E-value=0.1 Score=53.37 Aligned_cols=70 Identities=23% Similarity=0.214 Sum_probs=52.2
Q ss_pred cEEEEEccchhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHH-hcCccc---c-------cccccccCCCCccEEEEcCC
Q 010101 368 KIFVLVGAGGAGRALAFGAKSRGARVIIFNRNYERAKALADA-VSGEAL---H-------FEYLHEFFPEKGMILANASA 436 (518)
Q Consensus 368 k~vlvlGaGg~araia~~L~~~G~~v~i~nRt~~ka~~la~~-~~~~~~---~-------~~~l~~~~~~~~divInatp 436 (518)
.++.|+|+|.-|.|++..|++.|.+|.++.|+++-.+++-.. -+..+. . ..|+.+ ...++|+|+-++|
T Consensus 2 ~kI~ViGaGswGTALA~~la~ng~~V~lw~r~~~~~~~i~~~~~N~~yLp~i~lp~~l~at~Dl~~-a~~~ad~iv~avP 80 (329)
T COG0240 2 MKIAVIGAGSWGTALAKVLARNGHEVRLWGRDEEIVAEINETRENPKYLPGILLPPNLKATTDLAE-ALDGADIIVIAVP 80 (329)
T ss_pred ceEEEEcCChHHHHHHHHHHhcCCeeEEEecCHHHHHHHHhcCcCccccCCccCCcccccccCHHH-HHhcCCEEEEECC
Confidence 478999999999999999999999999999999998887654 122221 1 123333 4556888888887
Q ss_pred CC
Q 010101 437 IG 438 (518)
Q Consensus 437 ~g 438 (518)
..
T Consensus 81 s~ 82 (329)
T COG0240 81 SQ 82 (329)
T ss_pred hH
Confidence 53
No 447
>COG5322 Predicted dehydrogenase [General function prediction only]
Probab=94.21 E-value=0.27 Score=48.49 Aligned_cols=110 Identities=19% Similarity=0.302 Sum_probs=67.5
Q ss_pred cccCCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEeCCHHHHHH-----HHHHhcCccc-ccccccccCCCCccEEEEcC
Q 010101 363 SPIAGKIFVLVGA-GGAGRALAFGAKSRGARVIIFNRNYERAKA-----LADAVSGEAL-HFEYLHEFFPEKGMILANAS 435 (518)
Q Consensus 363 ~~l~~k~vlvlGa-Gg~araia~~L~~~G~~v~i~nRt~~ka~~-----la~~~~~~~~-~~~~l~~~~~~~~divInat 435 (518)
.++++.+|.|+|+ |-.|.+++.-|+..++.+.++-|+.++-.. +-+.++...+ +.+ .+ ...+.+++..|+
T Consensus 163 idlsqatvaivGa~G~Ia~~Iar~la~~~~~~~ll~r~aea~~rq~l~~l~e~~~~~~i~s~d-~~--~~~e~i~v~vAs 239 (351)
T COG5322 163 IDLSQATVAIVGATGDIASAIARWLAPKVGVKELLLRDAEARNRQRLTLLQEELGRGKIMSLD-YA--LPQEDILVWVAS 239 (351)
T ss_pred cCHHHCeEEEecCCchHHHHHHHHhccccCEEEEecccHHhhhhhhhhhcccccCCCeeeecc-cc--ccccceEEEEee
Confidence 6788899999999 679999999999888877788877654332 2233332221 111 11 223334444444
Q ss_pred -CCCCCCCCCCCCCChhhhcCCCEEEEEeeCCCchHHHHHHHHCC-Ceeecc
Q 010101 436 -AIGMEPNSDQSPVPKEALKAYELVFDAVYTPRNTRLLREAAEVG-ATVVSG 485 (518)
Q Consensus 436 -p~g~~~~~~~~~~~~~~l~~~~~v~Di~Y~P~~T~ll~~A~~~G-~~~i~G 485 (518)
|.| ..+.+..++++.+++|--|- +.- -...|..| ..+++|
T Consensus 240 ~~~g-------~~I~pq~lkpg~~ivD~g~P-~dv--d~~vk~~~~V~Ii~G 281 (351)
T COG5322 240 MPKG-------VEIFPQHLKPGCLIVDGGYP-KDV--DTSVKNVGGVRIIPG 281 (351)
T ss_pred cCCC-------ceechhhccCCeEEEcCCcC-ccc--ccccccCCCeEEecC
Confidence 322 13667789999999999883 321 12224444 677765
No 448
>PLN02986 cinnamyl-alcohol dehydrogenase family protein
Probab=94.18 E-value=0.1 Score=53.30 Aligned_cols=41 Identities=24% Similarity=0.203 Sum_probs=34.9
Q ss_pred CCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEeCCHHHHHHH
Q 010101 366 AGKIFVLVGA-GGAGRALAFGAKSRGARVIIFNRNYERAKAL 406 (518)
Q Consensus 366 ~~k~vlvlGa-Gg~araia~~L~~~G~~v~i~nRt~~ka~~l 406 (518)
+|++++|.|+ |..|+.++..|.+.|++|+++.|+.++++.+
T Consensus 4 ~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~ 45 (322)
T PLN02986 4 GGKLVCVTGASGYIASWIVKLLLLRGYTVKATVRDLTDRKKT 45 (322)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCCcchHHH
Confidence 4789999996 7899999999999999999888887655443
No 449
>cd05290 LDH_3 A subgroup of L-lactate dehydrogenases. L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed of some bacterial LDHs from firmicutes, gammaproteobacteria, and actinobacteria. Vertebrate LDHs are non-allosteric, but some bacterial LDHs are activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenase, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.
Probab=94.16 E-value=0.11 Score=53.02 Aligned_cols=71 Identities=20% Similarity=0.204 Sum_probs=51.4
Q ss_pred EEEEEccchhHHHHHHHHHHCCC--eEEEEeCCHHHHHHHHHHhcCc-c------ccc--ccccccCCCCccEEEEcCCC
Q 010101 369 IFVLVGAGGAGRALAFGAKSRGA--RVIIFNRNYERAKALADAVSGE-A------LHF--EYLHEFFPEKGMILANASAI 437 (518)
Q Consensus 369 ~vlvlGaGg~araia~~L~~~G~--~v~i~nRt~~ka~~la~~~~~~-~------~~~--~~l~~~~~~~~divInatp~ 437 (518)
++.|||+|.+|.++|+.|...|. ++.+++++.++++..+.++... . ..+ .+.+ ...++|+||-|...
T Consensus 1 Ki~IIGaG~VG~~~a~~l~~~~~~~elvL~Di~~~~a~g~a~DL~~~~~~~~~~~~~i~~~~y~--~~~~aDivvitaG~ 78 (307)
T cd05290 1 KLVVIGAGHVGSAVLNYALALGLFSEIVLIDVNEGVAEGEALDFHHATALTYSTNTKIRAGDYD--DCADADIIVITAGP 78 (307)
T ss_pred CEEEECCCHHHHHHHHHHHhcCCCCEEEEEeCCcchhhHHHHHHHhhhccCCCCCEEEEECCHH--HhCCCCEEEECCCC
Confidence 47899999999999999998886 7999999988887777666421 1 111 1211 35679999987765
Q ss_pred CCCC
Q 010101 438 GMEP 441 (518)
Q Consensus 438 g~~~ 441 (518)
.-.|
T Consensus 79 ~~kp 82 (307)
T cd05290 79 SIDP 82 (307)
T ss_pred CCCC
Confidence 4334
No 450
>PF01262 AlaDh_PNT_C: Alanine dehydrogenase/PNT, C-terminal domain; InterPro: IPR007698 Alanine dehydrogenases (1.4.1.1 from EC) and pyridine nucleotide transhydrogenase (1.6.1.1 from EC) have been shown to share regions of similarity []. Alanine dehydrogenase catalyzes the NAD-dependent reversible reductive amination of pyruvate into alanine. Pyridine nucleotide transhydrogenase catalyzes the reduction of NADP+ to NADPH with the concomitant oxidation of NADH to NAD+. This enzyme is located in the plasma membrane of prokaryotes and in the inner membrane of the mitochondria of eukaryotes. The transhydrogenation between NADH and NADP is coupled with the translocation of a proton across the membrane. In prokaryotes the enzyme is composed of two different subunits, an alpha chain (gene pntA) and a beta chain (gene pntB), while in eukaryotes it is a single chain protein. The sequence of alanine dehydrogenase from several bacterial species are related with those of the alpha subunit of bacterial pyridine nucleotide transhydrogenase and of the N-terminal half of the eukaryotic enzyme. The two most conserved regions correspond respectively to the N-terminal extremity of these proteins and to a central glycine-rich region which is part of the NAD(H)-binding site. This is a C-terminal domain of alanine dehydrogenases (1.4.1.1 from EC). This domain is also found in the lysine 2-oxoglutarate reductases. ; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1KOL_A 2EEZ_F 1L7E_C 1PTJ_B 1NM5_A 1HZZ_B 1U2G_B 2FSV_A 2FR8_A 1U2D_A ....
Probab=94.15 E-value=0.11 Score=48.03 Aligned_cols=97 Identities=23% Similarity=0.272 Sum_probs=61.2
Q ss_pred ccCCcEEEEEccchhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHhcCcccccc------------------------c
Q 010101 364 PIAGKIFVLVGAGGAGRALAFGAKSRGARVIIFNRNYERAKALADAVSGEALHFE------------------------Y 419 (518)
Q Consensus 364 ~l~~k~vlvlGaGg~araia~~L~~~G~~v~i~nRt~~ka~~la~~~~~~~~~~~------------------------~ 419 (518)
.+...+++|+|+|-+|+.++..+..+|+++++.+..+++.+++-.... ..+.++ .
T Consensus 17 ~~~p~~vvv~G~G~vg~gA~~~~~~lGa~v~~~d~~~~~~~~~~~~~~-~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 95 (168)
T PF01262_consen 17 GVPPAKVVVTGAGRVGQGAAEIAKGLGAEVVVPDERPERLRQLESLGA-YFIEVDYEDHLERKDFDKADYYEHPESYESN 95 (168)
T ss_dssp EE-T-EEEEESTSHHHHHHHHHHHHTT-EEEEEESSHHHHHHHHHTTT-EESEETTTTTTTSB-CCHHHCHHHCCHHHHH
T ss_pred CCCCeEEEEECCCHHHHHHHHHHhHCCCEEEeccCCHHHHHhhhcccC-ceEEEcccccccccccchhhhhHHHHHhHHH
Confidence 355689999999999999999999999999999999988877654332 111110 1
Q ss_pred ccccCCCCccEEEEcCC-CCCCCCCCCCCCChh---hhcCCCEEEEEeeC
Q 010101 420 LHEFFPEKGMILANASA-IGMEPNSDQSPVPKE---ALKAYELVFDAVYT 465 (518)
Q Consensus 420 l~~~~~~~~divInatp-~g~~~~~~~~~~~~~---~l~~~~~v~Di~Y~ 465 (518)
+.+ .+..+|+||++.- .+-. .+..+..+ .+++..++.|++-.
T Consensus 96 f~~-~i~~~d~vI~~~~~~~~~---~P~lvt~~~~~~m~~gsvIvDis~D 141 (168)
T PF01262_consen 96 FAE-FIAPADIVIGNGLYWGKR---APRLVTEEMVKSMKPGSVIVDISCD 141 (168)
T ss_dssp HHH-HHHH-SEEEEHHHBTTSS------SBEHHHHHTSSTTEEEEETTGG
T ss_pred HHH-HHhhCcEEeeecccCCCC---CCEEEEhHHhhccCCCceEEEEEec
Confidence 111 2456799986553 2211 11234443 35778899998754
No 451
>PRK06398 aldose dehydrogenase; Validated
Probab=94.15 E-value=0.069 Score=52.71 Aligned_cols=39 Identities=26% Similarity=0.434 Sum_probs=34.7
Q ss_pred ccCCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEeCCHHH
Q 010101 364 PIAGKIFVLVGA-GGAGRALAFGAKSRGARVIIFNRNYER 402 (518)
Q Consensus 364 ~l~~k~vlvlGa-Gg~araia~~L~~~G~~v~i~nRt~~k 402 (518)
++++|+++|.|+ ||.|++++..|.+.|++|++++|+.++
T Consensus 3 ~l~gk~vlItGas~gIG~~ia~~l~~~G~~Vi~~~r~~~~ 42 (258)
T PRK06398 3 GLKDKVAIVTGGSQGIGKAVVNRLKEEGSNVINFDIKEPS 42 (258)
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCccc
Confidence 367899999997 689999999999999999999998654
No 452
>cd00650 LDH_MDH_like NAD-dependent, lactate dehydrogenase-like, 2-hydroxycarboxylate dehydrogenase family. Members of this family include ubiquitous enzymes like L-lactate dehydrogenases (LDH), L-2-hydroxyisocaproate dehydrogenases, and some malate dehydrogenases (MDH). LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH/MDH-like proteins are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains
Probab=94.14 E-value=0.094 Score=52.29 Aligned_cols=71 Identities=21% Similarity=0.412 Sum_probs=51.0
Q ss_pred EEEEcc-chhHHHHHHHHHHCC----CeEEEEeCCHHHHHHHHHHhcCc-----cccc---ccccccCCCCccEEEEcCC
Q 010101 370 FVLVGA-GGAGRALAFGAKSRG----ARVIIFNRNYERAKALADAVSGE-----ALHF---EYLHEFFPEKGMILANASA 436 (518)
Q Consensus 370 vlvlGa-Gg~araia~~L~~~G----~~v~i~nRt~~ka~~la~~~~~~-----~~~~---~~l~~~~~~~~divInatp 436 (518)
+.|+|+ |.+|..+++.|+..| .+|++++++.++++..+.++..- ...+ .++.+ ...++|+||.+..
T Consensus 1 I~IIGagG~vG~~ia~~l~~~~~~~~~el~L~D~~~~~l~~~~~dl~~~~~~~~~~~i~~~~d~~~-~~~~aDiVv~t~~ 79 (263)
T cd00650 1 IAVIGAGGNVGPALAFGLADGSVLLAIELVLYDIDEEKLKGVAMDLQDAVEPLADIKVSITDDPYE-AFKDADVVIITAG 79 (263)
T ss_pred CEEECCCChHHHHHHHHHHhCCCCcceEEEEEeCCcccchHHHHHHHHhhhhccCcEEEECCchHH-HhCCCCEEEECCC
Confidence 469999 779999999999888 48999999998887776665321 0111 12223 4678999999886
Q ss_pred CCCCC
Q 010101 437 IGMEP 441 (518)
Q Consensus 437 ~g~~~ 441 (518)
.+-.|
T Consensus 80 ~~~~~ 84 (263)
T cd00650 80 VGRKP 84 (263)
T ss_pred CCCCc
Confidence 65444
No 453
>PRK06249 2-dehydropantoate 2-reductase; Provisional
Probab=94.12 E-value=0.1 Score=53.41 Aligned_cols=35 Identities=17% Similarity=0.134 Sum_probs=32.1
Q ss_pred CcEEEEEccchhHHHHHHHHHHCCCeEEEEeCCHH
Q 010101 367 GKIFVLVGAGGAGRALAFGAKSRGARVIIFNRNYE 401 (518)
Q Consensus 367 ~k~vlvlGaGg~araia~~L~~~G~~v~i~nRt~~ 401 (518)
..+++|+|+|.+|..++..|++.|++|+++.|+..
T Consensus 5 ~m~I~IiG~GaiG~~lA~~L~~~g~~V~~~~r~~~ 39 (313)
T PRK06249 5 TPRIGIIGTGAIGGFYGAMLARAGFDVHFLLRSDY 39 (313)
T ss_pred CcEEEEECCCHHHHHHHHHHHHCCCeEEEEEeCCH
Confidence 35899999999999999999999999999999864
No 454
>PRK05599 hypothetical protein; Provisional
Probab=94.11 E-value=0.11 Score=50.86 Aligned_cols=42 Identities=21% Similarity=0.290 Sum_probs=36.9
Q ss_pred cEEEEEcc-chhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHh
Q 010101 368 KIFVLVGA-GGAGRALAFGAKSRGARVIIFNRNYERAKALADAV 410 (518)
Q Consensus 368 k~vlvlGa-Gg~araia~~L~~~G~~v~i~nRt~~ka~~la~~~ 410 (518)
++++|.|+ +|.|++++..|. .|.+|.+++|+.++++++++++
T Consensus 1 ~~vlItGas~GIG~aia~~l~-~g~~Vil~~r~~~~~~~~~~~l 43 (246)
T PRK05599 1 MSILILGGTSDIAGEIATLLC-HGEDVVLAARRPEAAQGLASDL 43 (246)
T ss_pred CeEEEEeCccHHHHHHHHHHh-CCCEEEEEeCCHHHHHHHHHHH
Confidence 36889988 589999999998 4899999999999999888766
No 455
>PRK13303 L-aspartate dehydrogenase; Provisional
Probab=94.11 E-value=0.082 Score=52.89 Aligned_cols=106 Identities=16% Similarity=0.113 Sum_probs=58.5
Q ss_pred EEEEEccchhHHHHHHHHHHC-CCeE-EEEeCCHHHHHHHHHHhcCcccccccccccCCCCccEEEEcCCCCCCCCCCCC
Q 010101 369 IFVLVGAGGAGRALAFGAKSR-GARV-IIFNRNYERAKALADAVSGEALHFEYLHEFFPEKGMILANASAIGMEPNSDQS 446 (518)
Q Consensus 369 ~vlvlGaGg~araia~~L~~~-G~~v-~i~nRt~~ka~~la~~~~~~~~~~~~l~~~~~~~~divInatp~g~~~~~~~~ 446 (518)
++.|+|+|.+|+.++.++.+. +.++ .++.|. ...+...+.++.....+.++++. ..+.|+||.|||.....
T Consensus 3 rVgIiG~G~iG~~~~~~l~~~~~~~l~~v~~~~-~~~~~~~~~~~~~~~~~~d~~~l-~~~~DvVve~t~~~~~~----- 75 (265)
T PRK13303 3 KVAMIGFGAIGAAVLELLEHDPDLRVDWVIVPE-HSIDAVRRALGEAVRVVSSVDAL-PQRPDLVVECAGHAALK----- 75 (265)
T ss_pred EEEEECCCHHHHHHHHHHhhCCCceEEEEEEcC-CCHHHHhhhhccCCeeeCCHHHh-ccCCCEEEECCCHHHHH-----
Confidence 799999999999999999876 4443 344443 22222333332211122233321 24689999999864221
Q ss_pred CCChhhhcCCCEEEEEee---C-CC-chHHHHHHHHCCCe
Q 010101 447 PVPKEALKAYELVFDAVY---T-PR-NTRLLREAAEVGAT 481 (518)
Q Consensus 447 ~~~~~~l~~~~~v~Di~Y---~-P~-~T~ll~~A~~~G~~ 481 (518)
..-...|..+.-|+-..- . +. ...+.+.|++.|.+
T Consensus 76 e~~~~aL~aGk~Vvi~s~~Al~d~~~~~~L~~~A~~~g~~ 115 (265)
T PRK13303 76 EHVVPILKAGIDCAVISVGALADEALRERLEQAAEAGGAR 115 (265)
T ss_pred HHHHHHHHcCCCEEEeChHHhcCHHHHHHHHHHHHHCCCE
Confidence 122344555443443221 1 11 24566778888876
No 456
>PRK12747 short chain dehydrogenase; Provisional
Probab=94.08 E-value=0.13 Score=50.37 Aligned_cols=45 Identities=33% Similarity=0.433 Sum_probs=36.8
Q ss_pred CCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEe-CCHHHHHHHHHHh
Q 010101 366 AGKIFVLVGA-GGAGRALAFGAKSRGARVIIFN-RNYERAKALADAV 410 (518)
Q Consensus 366 ~~k~vlvlGa-Gg~araia~~L~~~G~~v~i~n-Rt~~ka~~la~~~ 410 (518)
++|+++|.|+ ||.|++++..|++.|++|.+.. |+.++.++++.++
T Consensus 3 ~~k~~lItGas~gIG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~ 49 (252)
T PRK12747 3 KGKVALVTGASRGIGRAIAKRLANDGALVAIHYGNRKEEAEETVYEI 49 (252)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHH
Confidence 4789999987 6899999999999999988864 6677776666554
No 457
>PRK08063 enoyl-(acyl carrier protein) reductase; Provisional
Probab=94.06 E-value=0.12 Score=50.31 Aligned_cols=45 Identities=24% Similarity=0.548 Sum_probs=37.7
Q ss_pred CCcEEEEEcc-chhHHHHHHHHHHCCCeEEE-EeCCHHHHHHHHHHh
Q 010101 366 AGKIFVLVGA-GGAGRALAFGAKSRGARVII-FNRNYERAKALADAV 410 (518)
Q Consensus 366 ~~k~vlvlGa-Gg~araia~~L~~~G~~v~i-~nRt~~ka~~la~~~ 410 (518)
.+++++|.|+ ||.|++++..|.+.|++|.+ ..|+.++.+++++.+
T Consensus 3 ~~~~vlItGa~g~iG~~~a~~l~~~g~~v~~~~~r~~~~~~~~~~~~ 49 (250)
T PRK08063 3 SGKVALVTGSSRGIGKAIALRLAEEGYDIAVNYARSRKAAEETAEEI 49 (250)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHH
Confidence 4689999988 67999999999999997665 688888887776655
No 458
>TIGR02822 adh_fam_2 zinc-binding alcohol dehydrogenase family protein. Members of this model form a distinct subset of the larger family of oxidoreductases that includes zinc-binding alcohol dehydrogenases and NADPH:quinone reductases (pfam00107). The gene neighborhood of members of this family is not conserved and it appears that no members are characterized. The sequence of the family includes 6 invariant cysteine residues and one invariant histidine. It appears that no member is characterized.
Probab=94.04 E-value=0.22 Score=51.20 Aligned_cols=69 Identities=25% Similarity=0.163 Sum_probs=50.5
Q ss_pred CCcEEEEEccchhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHhcCccc-ccccccccCCCCccEEEEcCCCC
Q 010101 366 AGKIFVLVGAGGAGRALAFGAKSRGARVIIFNRNYERAKALADAVSGEAL-HFEYLHEFFPEKGMILANASAIG 438 (518)
Q Consensus 366 ~~k~vlvlGaGg~araia~~L~~~G~~v~i~nRt~~ka~~la~~~~~~~~-~~~~l~~~~~~~~divInatp~g 438 (518)
.|.+++|.|+|++|.+++..++..|++|+.+.++.+|. ++++++|...+ ...+. .....|+++.+++.+
T Consensus 165 ~g~~VlV~G~g~iG~~a~~~a~~~G~~vi~~~~~~~~~-~~a~~~Ga~~vi~~~~~---~~~~~d~~i~~~~~~ 234 (329)
T TIGR02822 165 PGGRLGLYGFGGSAHLTAQVALAQGATVHVMTRGAAAR-RLALALGAASAGGAYDT---PPEPLDAAILFAPAG 234 (329)
T ss_pred CCCEEEEEcCCHHHHHHHHHHHHCCCeEEEEeCChHHH-HHHHHhCCceecccccc---CcccceEEEECCCcH
Confidence 47899999999999988887778899998999998884 67888886542 21111 113468778777543
No 459
>PRK08264 short chain dehydrogenase; Validated
Probab=93.99 E-value=0.096 Score=50.64 Aligned_cols=41 Identities=37% Similarity=0.533 Sum_probs=36.5
Q ss_pred cCCcEEEEEcc-chhHHHHHHHHHHCCC-eEEEEeCCHHHHHH
Q 010101 365 IAGKIFVLVGA-GGAGRALAFGAKSRGA-RVIIFNRNYERAKA 405 (518)
Q Consensus 365 l~~k~vlvlGa-Gg~araia~~L~~~G~-~v~i~nRt~~ka~~ 405 (518)
+.+++++|+|+ |+.|++++..|.+.|+ +|+++.|+.+++++
T Consensus 4 ~~~~~vlItGgsg~iG~~la~~l~~~G~~~V~~~~r~~~~~~~ 46 (238)
T PRK08264 4 IKGKVVLVTGANRGIGRAFVEQLLARGAAKVYAAARDPESVTD 46 (238)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCcccEEEEecChhhhhh
Confidence 45789999986 8899999999999999 99999999887654
No 460
>PRK07856 short chain dehydrogenase; Provisional
Probab=93.99 E-value=0.095 Score=51.34 Aligned_cols=39 Identities=23% Similarity=0.484 Sum_probs=35.0
Q ss_pred ccCCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEeCCHHH
Q 010101 364 PIAGKIFVLVGA-GGAGRALAFGAKSRGARVIIFNRNYER 402 (518)
Q Consensus 364 ~l~~k~vlvlGa-Gg~araia~~L~~~G~~v~i~nRt~~k 402 (518)
.+++|+++|.|+ ||.|++++..|++.|++|+++.|+.++
T Consensus 3 ~~~~k~~lItGas~gIG~~la~~l~~~g~~v~~~~r~~~~ 42 (252)
T PRK07856 3 DLTGRVVLVTGGTRGIGAGIARAFLAAGATVVVCGRRAPE 42 (252)
T ss_pred CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCChhh
Confidence 367899999987 689999999999999999999998765
No 461
>PRK06223 malate dehydrogenase; Reviewed
Probab=93.95 E-value=0.17 Score=51.63 Aligned_cols=72 Identities=15% Similarity=0.169 Sum_probs=50.7
Q ss_pred cEEEEEccchhHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHHhcCc--------cccc-ccccccCCCCccEEEEcCCC
Q 010101 368 KIFVLVGAGGAGRALAFGAKSRGA-RVIIFNRNYERAKALADAVSGE--------ALHF-EYLHEFFPEKGMILANASAI 437 (518)
Q Consensus 368 k~vlvlGaGg~araia~~L~~~G~-~v~i~nRt~~ka~~la~~~~~~--------~~~~-~~l~~~~~~~~divInatp~ 437 (518)
+++.|+|+|-+|..+++.++..|. +|.+++++.++++..+.++... .+.. .+.+ ...++|+||.+...
T Consensus 3 ~KI~VIGaG~vG~~ia~~la~~~~~ev~L~D~~~~~~~~~~~dl~~~~~~~~~~~~i~~~~d~~--~~~~aDiVii~~~~ 80 (307)
T PRK06223 3 KKISIIGAGNVGATLAHLLALKELGDVVLFDIVEGVPQGKALDIAEAAPVEGFDTKITGTNDYE--DIAGSDVVVITAGV 80 (307)
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCeEEEEEECCCchhHHHHHHHHhhhhhcCCCcEEEeCCCHH--HHCCCCEEEECCCC
Confidence 589999999999999999998876 9999999988776654433210 0111 1222 35679999988765
Q ss_pred CCCC
Q 010101 438 GMEP 441 (518)
Q Consensus 438 g~~~ 441 (518)
+..+
T Consensus 81 p~~~ 84 (307)
T PRK06223 81 PRKP 84 (307)
T ss_pred CCCc
Confidence 4443
No 462
>cd02801 DUS_like_FMN Dihydrouridine synthase-like (DUS-like) FMN-binding domain. Members of this family catalyze the reduction of the 5,6-double bond of a uridine residue on tRNA. Dihydrouridine modification of tRNA is widely observed in prokaryotes and eukaryotes, and also in some archaea. Most dihydrouridines are found in the D loop of t-RNAs. The role of dihydrouridine in tRNA is currently unknown, but may increase conformational flexibility of the tRNA. It is likely that different family members have different substrate specificities, which may overlap. 1VHN, a putative flavin oxidoreductase, has high sequence similarity to DUS. The enzymatic mechanism of 1VHN is not known at the present.
Probab=93.92 E-value=1.8 Score=41.81 Aligned_cols=86 Identities=16% Similarity=0.178 Sum_probs=61.1
Q ss_pred eEEEeecCCCHHHHHHHHHHHHhhCCCEEEEEecc---------CC----CCc---HHHHHHHhcCCCCcEEEEeecCCC
Q 010101 10 LVCTQLECETTEEMQASIEQAKVEGADLVELCIDS---------ME----FSH---ISEVDKLIQHPTLPAIVSYRLKSS 73 (518)
Q Consensus 10 ~icv~l~~~~~~~~~~~~~~~~~~g~D~vElRlD~---------l~----~~~---~~~l~~l~~~~~~PiI~T~R~~~e 73 (518)
.+.+.|.+.+.+++.+.++.+.+.|+|.|||-+-+ +. .++ .+.++.+++..+.|+.+-+|..++
T Consensus 56 p~~~qi~g~~~~~~~~aa~~~~~aG~d~ieln~g~p~~~~~~~~~G~~l~~~~~~~~eii~~v~~~~~~~v~vk~r~~~~ 135 (231)
T cd02801 56 PLIVQLGGSDPETLAEAAKIVEELGADGIDLNMGCPSPKVTKGGAGAALLKDPELVAEIVRAVREAVPIPVTVKIRLGWD 135 (231)
T ss_pred CEEEEEcCCCHHHHHHHHHHHHhcCCCEEEEeCCCCHHHHhCCCeeehhcCCHHHHHHHHHHHHHhcCCCEEEEEeeccC
Confidence 35578999999999998888877899999997654 21 122 245666766667888887774211
Q ss_pred CCCCCCCcHHHHHHHHHHHhhcCCcEEEE
Q 010101 74 RKSSDEACKNTCLQVLRRALDLDVEFVEM 102 (518)
Q Consensus 74 GG~~~~~~~~~~~~ll~~~~~~g~~yvDi 102 (518)
. +++-.++++.+.+.|+++|.|
T Consensus 136 ------~-~~~~~~~~~~l~~~Gvd~i~v 157 (231)
T cd02801 136 ------D-EEETLELAKALEDAGASALTV 157 (231)
T ss_pred ------C-chHHHHHHHHHHHhCCCEEEE
Confidence 1 235667777788889999876
No 463
>TIGR02415 23BDH acetoin reductases. One member of this family, as characterized in Klebsiella terrigena, is described as able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also called capable of irreversible reduction of diacetyl with NADH to acetoin. Blomqvist, et al. decline to specify either EC 1.1.1.4 which is (R,R)-butanediol dehydrogenase, or EC 1.1.1.5, which is acetoin dehydrogenase without a specified stereochemistry, for this enzyme. This enzyme is a homotetramer in the family of short chain dehydrogenases (pfam00106). Another member of this family, from Corynebacterium glutamicum, is called L-2,3-butanediol dehydrogenase (PubMed:11577733).
Probab=93.91 E-value=0.14 Score=49.98 Aligned_cols=43 Identities=28% Similarity=0.387 Sum_probs=37.9
Q ss_pred cEEEEEcc-chhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHh
Q 010101 368 KIFVLVGA-GGAGRALAFGAKSRGARVIIFNRNYERAKALADAV 410 (518)
Q Consensus 368 k~vlvlGa-Gg~araia~~L~~~G~~v~i~nRt~~ka~~la~~~ 410 (518)
|+++|+|+ |+.|++++..|.+.|++|++++|+.++++++.+.+
T Consensus 1 k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~l 44 (254)
T TIGR02415 1 KVALVTGGAQGIGKGIAERLAKDGFAVAVADLNEETAKETAKEI 44 (254)
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHH
Confidence 47899986 78999999999999999999999988887776655
No 464
>PRK12746 short chain dehydrogenase; Provisional
Probab=93.86 E-value=0.15 Score=49.78 Aligned_cols=46 Identities=35% Similarity=0.573 Sum_probs=38.4
Q ss_pred cCCcEEEEEcc-chhHHHHHHHHHHCCCeEEE-EeCCHHHHHHHHHHh
Q 010101 365 IAGKIFVLVGA-GGAGRALAFGAKSRGARVII-FNRNYERAKALADAV 410 (518)
Q Consensus 365 l~~k~vlvlGa-Gg~araia~~L~~~G~~v~i-~nRt~~ka~~la~~~ 410 (518)
+++++++|.|+ ||.|++++..|.+.|++|.+ ..|+.++.+++.+.+
T Consensus 4 ~~~~~ilItGasg~iG~~la~~l~~~G~~v~i~~~r~~~~~~~~~~~~ 51 (254)
T PRK12746 4 LDGKVALVTGASRGIGRAIAMRLANDGALVAIHYGRNKQAADETIREI 51 (254)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHH
Confidence 45789999997 78999999999999998766 589988877776655
No 465
>PTZ00345 glycerol-3-phosphate dehydrogenase; Provisional
Probab=93.86 E-value=0.11 Score=54.26 Aligned_cols=71 Identities=17% Similarity=0.156 Sum_probs=48.7
Q ss_pred CcEEEEEccchhHHHHHHHHHHCC-------CeEEEEeCCHH-HHHHHHHHhcC-----ccc---cc-------cccccc
Q 010101 367 GKIFVLVGAGGAGRALAFGAKSRG-------ARVIIFNRNYE-RAKALADAVSG-----EAL---HF-------EYLHEF 423 (518)
Q Consensus 367 ~k~vlvlGaGg~araia~~L~~~G-------~~v~i~nRt~~-ka~~la~~~~~-----~~~---~~-------~~l~~~ 423 (518)
..++.|||+|..|.|++..|.+.| .+|.++.|+.+ ..+.+++.++. .+. .+ .++.+
T Consensus 11 ~~ki~ViGaG~wGtAlA~~l~~n~~~~~~~~~~V~lw~~~~~~~~~~~~~~in~~~~N~~ylp~~~Lp~ni~~tsdl~e- 89 (365)
T PTZ00345 11 PLKVSVIGSGNWGSAISKVVGENTQRNYIFHNEVRMWVLEEIVEGEKLSDIINTKHENVKYLPGIKLPDNIVAVSDLKE- 89 (365)
T ss_pred CCeEEEECCCHHHHHHHHHHHhcCCcccCCCCeEEEEEecccccchHHHHHHHhcCCCcccCCCCcCCCceEEecCHHH-
Confidence 458999999999999999999887 58999999976 22233333331 111 11 12322
Q ss_pred CCCCccEEEEcCCCC
Q 010101 424 FPEKGMILANASAIG 438 (518)
Q Consensus 424 ~~~~~divInatp~g 438 (518)
...++|+||-++|..
T Consensus 90 av~~aDiIvlAVPsq 104 (365)
T PTZ00345 90 AVEDADLLIFVIPHQ 104 (365)
T ss_pred HHhcCCEEEEEcChH
Confidence 356789999998864
No 466
>PRK10637 cysG siroheme synthase; Provisional
Probab=93.85 E-value=0.12 Score=55.78 Aligned_cols=71 Identities=20% Similarity=0.200 Sum_probs=47.7
Q ss_pred cccCCcEEEEEccchhHHHHHHHHHHCCCeEEEEeCCHH-HHHHHHHHhcCccc--ccccccccCCCCccEEEEcCC
Q 010101 363 SPIAGKIFVLVGAGGAGRALAFGAKSRGARVIIFNRNYE-RAKALADAVSGEAL--HFEYLHEFFPEKGMILANASA 436 (518)
Q Consensus 363 ~~l~~k~vlvlGaGg~araia~~L~~~G~~v~i~nRt~~-ka~~la~~~~~~~~--~~~~l~~~~~~~~divInatp 436 (518)
.+++|++|||+|+|.+|.-=+..|.+.|++|+|++.... ..+++++.-...+. .+. .+ .+.++++||-||.
T Consensus 8 ~~l~~~~vlvvGgG~vA~rk~~~ll~~ga~v~visp~~~~~~~~l~~~~~i~~~~~~~~--~~-dl~~~~lv~~at~ 81 (457)
T PRK10637 8 CQLRDRDCLLVGGGDVAERKARLLLDAGARLTVNALAFIPQFTAWADAGMLTLVEGPFD--ES-LLDTCWLAIAATD 81 (457)
T ss_pred EEcCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCCCHHHHHHHhCCCEEEEeCCCC--hH-HhCCCEEEEECCC
Confidence 568899999999999998888999999999999987643 34445433211111 111 11 2345677777774
No 467
>PRK06523 short chain dehydrogenase; Provisional
Probab=93.84 E-value=0.11 Score=51.06 Aligned_cols=39 Identities=31% Similarity=0.390 Sum_probs=35.2
Q ss_pred ccCCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEeCCHHH
Q 010101 364 PIAGKIFVLVGA-GGAGRALAFGAKSRGARVIIFNRNYER 402 (518)
Q Consensus 364 ~l~~k~vlvlGa-Gg~araia~~L~~~G~~v~i~nRt~~k 402 (518)
.+++++++|.|+ ||.|++++..|++.|++|+++.|+.++
T Consensus 6 ~~~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~r~~~~ 45 (260)
T PRK06523 6 ELAGKRALVTGGTKGIGAATVARLLEAGARVVTTARSRPD 45 (260)
T ss_pred CCCCCEEEEECCCCchhHHHHHHHHHCCCEEEEEeCChhh
Confidence 477899999997 789999999999999999999998654
No 468
>cd00958 DhnA Class I fructose-1,6-bisphosphate (FBP) aldolases of the archaeal type (DhnA homologs) found in bacteria and archaea. Catalysis of the enzymes proceeds via a Schiff-base mechanism like other class I aldolases, although this subfamily is clearly divergent based on sequence similarity to other class I and class II (metal dependent) aldolase subfamilies.
Probab=93.82 E-value=2.3 Score=41.49 Aligned_cols=139 Identities=17% Similarity=0.200 Sum_probs=85.4
Q ss_pred EEeecC--CCHHHHHHHHHHHHhhCCCEE--EEEeccCCC-CcHHHHHHHh---cCCCCcEEEEeecCCCCCCCC--CCc
Q 010101 12 CTQLEC--ETTEEMQASIEQAKVEGADLV--ELCIDSMEF-SHISEVDKLI---QHPTLPAIVSYRLKSSRKSSD--EAC 81 (518)
Q Consensus 12 cv~l~~--~~~~~~~~~~~~~~~~g~D~v--ElRlD~l~~-~~~~~l~~l~---~~~~~PiI~T~R~~~eGG~~~--~~~ 81 (518)
|+++.+ .+......+++.++..|+|.+ .+|.-.+.. ...+.+..++ +..++|+|+..+. +|-... .+
T Consensus 65 ~~~i~~p~~~~~~~~~~v~~a~~~Ga~~v~~~~~~~~~~~~~~~~~i~~v~~~~~~~g~~~iie~~~--~g~~~~~~~~- 141 (235)
T cd00958 65 STSLSPKDDNDKVLVASVEDAVRLGADAVGVTVYVGSEEEREMLEELARVAAEAHKYGLPLIAWMYP--RGPAVKNEKD- 141 (235)
T ss_pred CCCCCCCCCCchhhhcCHHHHHHCCCCEEEEEEecCCchHHHHHHHHHHHHHHHHHcCCCEEEEEec--cCCcccCccC-
Confidence 445553 566667777889999999988 777654431 1112334443 3568999997654 233322 22
Q ss_pred HHHHHHHHHHHhhcCCcEEEEecCCCCchhhHHHhhcCCCcEEEEeeecCCCCCCChhHHHHHHHHHHHcCCCEEEE
Q 010101 82 KNTCLQVLRRALDLDVEFVEMDYEVASDPLMSEIIYSRSNTKIIVSSYLNGGGKPTTEKLGDVIACMQATGADVMKL 158 (518)
Q Consensus 82 ~~~~~~ll~~~~~~g~~yvDiEl~~~~~~~~~l~~~~~~~~kiI~S~H~f~~~tp~~~~l~~~~~~~~~~gadivKi 158 (518)
.++-....+.+.+.|+|||=+......+.++++.+. -...+++|=. -+..+.++..+.++++.+.|++-+=+
T Consensus 142 ~~~i~~~~~~a~~~GaD~Ik~~~~~~~~~~~~i~~~--~~~pvv~~GG---~~~~~~~~~l~~~~~~~~~Ga~gv~v 213 (235)
T cd00958 142 PDLIAYAARIGAELGADIVKTKYTGDAESFKEVVEG--CPVPVVIAGG---PKKDSEEEFLKMVYDAMEAGAAGVAV 213 (235)
T ss_pred HHHHHHHHHHHHHHCCCEEEecCCCCHHHHHHHHhc--CCCCEEEeCC---CCCCCHHHHHHHHHHHHHcCCcEEEe
Confidence 333334466788999999998644333555666542 3345666622 12346677888899999999985533
No 469
>PRK06924 short chain dehydrogenase; Provisional
Probab=93.81 E-value=0.11 Score=50.67 Aligned_cols=43 Identities=26% Similarity=0.431 Sum_probs=35.8
Q ss_pred cEEEEEcc-chhHHHHHHHHHHCCCeEEEEeCCH-HHHHHHHHHh
Q 010101 368 KIFVLVGA-GGAGRALAFGAKSRGARVIIFNRNY-ERAKALADAV 410 (518)
Q Consensus 368 k~vlvlGa-Gg~araia~~L~~~G~~v~i~nRt~-~ka~~la~~~ 410 (518)
|+++|+|+ ||.|++++..|.+.|++|.+++|+. ++.+++.+..
T Consensus 2 k~vlItGasggiG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~ 46 (251)
T PRK06924 2 RYVIITGTSQGLGEAIANQLLEKGTHVISISRTENKELTKLAEQY 46 (251)
T ss_pred cEEEEecCCchHHHHHHHHHHhcCCEEEEEeCCchHHHHHHHhcc
Confidence 57999986 7899999999999999999999987 5555555543
No 470
>PLN02602 lactate dehydrogenase
Probab=93.81 E-value=0.2 Score=52.24 Aligned_cols=69 Identities=12% Similarity=0.103 Sum_probs=51.3
Q ss_pred cEEEEEccchhHHHHHHHHHHCCC--eEEEEeCCHHHHHHHHHHhcCcc-----cccc---cccccCCCCccEEEEcCCC
Q 010101 368 KIFVLVGAGGAGRALAFGAKSRGA--RVIIFNRNYERAKALADAVSGEA-----LHFE---YLHEFFPEKGMILANASAI 437 (518)
Q Consensus 368 k~vlvlGaGg~araia~~L~~~G~--~v~i~nRt~~ka~~la~~~~~~~-----~~~~---~l~~~~~~~~divInatp~ 437 (518)
+++.|||+|.+|.++++.|...|. ++.+++++.++++..+.++.... ..+. +.+ ...++|+||-|...
T Consensus 38 ~KI~IIGaG~VG~~~a~~l~~~~l~~el~LiDi~~~~~~g~a~DL~~~~~~~~~~~i~~~~dy~--~~~daDiVVitAG~ 115 (350)
T PLN02602 38 TKVSVVGVGNVGMAIAQTILTQDLADELALVDVNPDKLRGEMLDLQHAAAFLPRTKILASTDYA--VTAGSDLCIVTAGA 115 (350)
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCCCchhhHHHHHHHhhhhcCCCCEEEeCCCHH--HhCCCCEEEECCCC
Confidence 699999999999999999998886 79999999988887776664211 1111 111 25679999987654
Q ss_pred C
Q 010101 438 G 438 (518)
Q Consensus 438 g 438 (518)
.
T Consensus 116 ~ 116 (350)
T PLN02602 116 R 116 (350)
T ss_pred C
Confidence 3
No 471
>PLN02586 probable cinnamyl alcohol dehydrogenase
Probab=93.80 E-value=0.15 Score=53.16 Aligned_cols=70 Identities=14% Similarity=0.208 Sum_probs=51.2
Q ss_pred CCcEEEEEccchhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHhcCcc-cccc---cccccCCCCccEEEEcCC
Q 010101 366 AGKIFVLVGAGGAGRALAFGAKSRGARVIIFNRNYERAKALADAVSGEA-LHFE---YLHEFFPEKGMILANASA 436 (518)
Q Consensus 366 ~~k~vlvlGaGg~araia~~L~~~G~~v~i~nRt~~ka~~la~~~~~~~-~~~~---~l~~~~~~~~divInatp 436 (518)
.|++++|.|+|+.|.+++..++.+|++|+++.++.++..++++++|... +... .+.. ....+|++|+++.
T Consensus 183 ~g~~VlV~G~G~vG~~avq~Ak~~Ga~vi~~~~~~~~~~~~~~~~Ga~~vi~~~~~~~~~~-~~~~~D~vid~~g 256 (360)
T PLN02586 183 PGKHLGVAGLGGLGHVAVKIGKAFGLKVTVISSSSNKEDEAINRLGADSFLVSTDPEKMKA-AIGTMDYIIDTVS 256 (360)
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCcchhhhHHHhCCCcEEEcCCCHHHHHh-hcCCCCEEEECCC
Confidence 4789999999999999999888999988888887777677777787632 1111 1111 1224799999875
No 472
>PRK07201 short chain dehydrogenase; Provisional
Probab=93.79 E-value=0.13 Score=57.84 Aligned_cols=47 Identities=36% Similarity=0.616 Sum_probs=42.5
Q ss_pred ccCCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHh
Q 010101 364 PIAGKIFVLVGA-GGAGRALAFGAKSRGARVIIFNRNYERAKALADAV 410 (518)
Q Consensus 364 ~l~~k~vlvlGa-Gg~araia~~L~~~G~~v~i~nRt~~ka~~la~~~ 410 (518)
.+++|+++|.|+ ||.|++++..|++.|++|.+++|+.++++++++++
T Consensus 368 ~~~~k~vlItGas~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~ 415 (657)
T PRK07201 368 PLVGKVVLITGASSGIGRATAIKVAEAGATVFLVARNGEALDELVAEI 415 (657)
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHH
Confidence 567899999997 78999999999999999999999999988887665
No 473
>PRK08642 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=93.79 E-value=0.14 Score=49.82 Aligned_cols=47 Identities=32% Similarity=0.507 Sum_probs=38.4
Q ss_pred cCCcEEEEEcc-chhHHHHHHHHHHCCCeEEEE-eCCHHHHHHHHHHhc
Q 010101 365 IAGKIFVLVGA-GGAGRALAFGAKSRGARVIIF-NRNYERAKALADAVS 411 (518)
Q Consensus 365 l~~k~vlvlGa-Gg~araia~~L~~~G~~v~i~-nRt~~ka~~la~~~~ 411 (518)
+++|+++|.|+ ||.|++++..|.+.|++|.+. .|+.++++.+.+.++
T Consensus 3 l~~k~ilItGas~gIG~~la~~l~~~G~~vv~~~~~~~~~~~~~~~~~~ 51 (253)
T PRK08642 3 ISEQTVLVTGGSRGLGAAIARAFAREGARVVVNYHQSEDAAEALADELG 51 (253)
T ss_pred CCCCEEEEeCCCCcHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHhC
Confidence 45789999986 789999999999999987765 567777777777664
No 474
>PRK05650 short chain dehydrogenase; Provisional
Probab=93.78 E-value=0.14 Score=50.67 Aligned_cols=43 Identities=26% Similarity=0.367 Sum_probs=37.8
Q ss_pred cEEEEEcc-chhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHh
Q 010101 368 KIFVLVGA-GGAGRALAFGAKSRGARVIIFNRNYERAKALADAV 410 (518)
Q Consensus 368 k~vlvlGa-Gg~araia~~L~~~G~~v~i~nRt~~ka~~la~~~ 410 (518)
++++|.|+ ||.|++++..|.+.|++|+++.|+.++++++.+.+
T Consensus 1 ~~vlVtGasggIG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l 44 (270)
T PRK05650 1 NRVMITGAASGLGRAIALRWAREGWRLALADVNEEGGEETLKLL 44 (270)
T ss_pred CEEEEecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHH
Confidence 36899987 78999999999999999999999999888776654
No 475
>cd04729 NanE N-acetylmannosamine-6-phosphate epimerase (NanE) converts N-acetylmannosamine-6-phosphate to N-acetylglucosamine-6-phosphate. This reaction is part of the pathway that allows the usage of sialic acid as a carbohydrate source. Sialic acids are a family of related sugars that are found as a component of glycoproteins, gangliosides, and other sialoglycoconjugates.
Probab=93.77 E-value=1.9 Score=41.57 Aligned_cols=137 Identities=14% Similarity=0.142 Sum_probs=76.8
Q ss_pred CcccccCCceEEEeecCC---CHHHHHHHHHHHHhhCCCEEEEEeccCCCCcHHHHHHHhcCCCCcEEEEeecCCCCCCC
Q 010101 1 MEVAAKNSLLVCTQLECE---TTEEMQASIEQAKVEGADLVELCIDSMEFSHISEVDKLIQHPTLPAIVSYRLKSSRKSS 77 (518)
Q Consensus 1 ~~~~~~~~~~icv~l~~~---~~~~~~~~~~~~~~~g~D~vElRlD~l~~~~~~~l~~l~~~~~~PiI~T~R~~~eGG~~ 77 (518)
|+|+.+..-.-|=..... +..+.....+.+...|+.++|+ +.+ +.+..+++..++|++.-+|..-++...
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~a~~~~~~G~~~~~~--~~~-----~~~~~i~~~~~iPil~~~~~~~~~~~~ 76 (219)
T cd04729 4 LEQLKGGLIVSCQALPGEPLHSPEIMAAMALAAVQGGAVGIRA--NGV-----EDIRAIRARVDLPIIGLIKRDYPDSEV 76 (219)
T ss_pred HHHhcCCeEEEccCCCCCCcCcHHHHHHHHHHHHHCCCeEEEc--CCH-----HHHHHHHHhCCCCEEEEEecCCCCCCc
Confidence 455555543333333222 2334455556667788998874 322 356777766799998777754332221
Q ss_pred CCCcHHHHHHHHHHHhhcCCcEEEEecCC---CC-chhhHHHh-hcCCC-cEEEEeeecCCCCCCChhHHHHHHHHHHHc
Q 010101 78 DEACKNTCLQVLRRALDLDVEFVEMDYEV---AS-DPLMSEII-YSRSN-TKIIVSSYLNGGGKPTTEKLGDVIACMQAT 151 (518)
Q Consensus 78 ~~~~~~~~~~ll~~~~~~g~~yvDiEl~~---~~-~~~~~l~~-~~~~~-~kiI~S~H~f~~~tp~~~~l~~~~~~~~~~ 151 (518)
-.+ ...+.++.+.+.|+++|=+.... +. +...++.+ .++.+ ..++++.|+ .++. .++.+.
T Consensus 77 ~ig---~~~~~~~~a~~aGad~I~~~~~~~~~p~~~~~~~~i~~~~~~g~~~iiv~v~t-------~~ea----~~a~~~ 142 (219)
T cd04729 77 YIT---PTIEEVDALAAAGADIIALDATDRPRPDGETLAELIKRIHEEYNCLLMADIST-------LEEA----LNAAKL 142 (219)
T ss_pred eeC---CCHHHHHHHHHcCCCEEEEeCCCCCCCCCcCHHHHHHHHHHHhCCeEEEECCC-------HHHH----HHHHHc
Confidence 112 13446688889999998776433 22 13334442 33333 666665442 2333 556678
Q ss_pred CCCEEEE
Q 010101 152 GADVMKL 158 (518)
Q Consensus 152 gadivKi 158 (518)
|+|++++
T Consensus 143 G~d~i~~ 149 (219)
T cd04729 143 GFDIIGT 149 (219)
T ss_pred CCCEEEc
Confidence 9999875
No 476
>PLN02214 cinnamoyl-CoA reductase
Probab=93.76 E-value=0.16 Score=52.56 Aligned_cols=38 Identities=29% Similarity=0.173 Sum_probs=34.2
Q ss_pred cCCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEeCCHHH
Q 010101 365 IAGKIFVLVGA-GGAGRALAFGAKSRGARVIIFNRNYER 402 (518)
Q Consensus 365 l~~k~vlvlGa-Gg~araia~~L~~~G~~v~i~nRt~~k 402 (518)
+++++++|.|+ |..|+.++..|.+.|++|+.+.|+.++
T Consensus 8 ~~~~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~ 46 (342)
T PLN02214 8 PAGKTVCVTGAGGYIASWIVKILLERGYTVKGTVRNPDD 46 (342)
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCchh
Confidence 56789999998 889999999999999999999998765
No 477
>cd08242 MDR_like Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group contains members identified as related to zinc-dependent alcohol dehydrogenase and other members of the MDR family, including threonine dehydrogenase. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group includes various activities, including the founding alcohol dehydrogenase (ADH), quinone reducta
Probab=93.76 E-value=0.27 Score=49.77 Aligned_cols=68 Identities=18% Similarity=0.160 Sum_probs=50.2
Q ss_pred CCcEEEEEccchhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHhcCccc-ccccccccCCCCccEEEEcCC
Q 010101 366 AGKIFVLVGAGGAGRALAFGAKSRGARVIIFNRNYERAKALADAVSGEAL-HFEYLHEFFPEKGMILANASA 436 (518)
Q Consensus 366 ~~k~vlvlGaGg~araia~~L~~~G~~v~i~nRt~~ka~~la~~~~~~~~-~~~~l~~~~~~~~divInatp 436 (518)
.+.+++|.|+|++|.+++..+..+|++|+++.++.++.+.+. .++.... .+.+.. ....+|++++++.
T Consensus 155 ~g~~vlV~g~g~vg~~~~q~a~~~G~~vi~~~~~~~~~~~~~-~~g~~~~~~~~~~~--~~~~~d~vid~~g 223 (319)
T cd08242 155 PGDKVAVLGDGKLGLLIAQVLALTGPDVVLVGRHSEKLALAR-RLGVETVLPDEAES--EGGGFDVVVEATG 223 (319)
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCeEEEEcCCHHHHHHHH-HcCCcEEeCccccc--cCCCCCEEEECCC
Confidence 468999999999999999999999999999999888866554 4775432 222211 2245899999864
No 478
>KOG1370 consensus S-adenosylhomocysteine hydrolase [Coenzyme transport and metabolism]
Probab=93.75 E-value=0.14 Score=51.25 Aligned_cols=69 Identities=29% Similarity=0.252 Sum_probs=52.9
Q ss_pred cccCCcEEEEEccchhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHhcCcccccccccccCCCCccEEEEcCC
Q 010101 363 SPIAGKIFVLVGAGGAGRALAFGAKSRGARVIIFNRNYERAKALADAVSGEALHFEYLHEFFPEKGMILANASA 436 (518)
Q Consensus 363 ~~l~~k~vlvlGaGg~araia~~L~~~G~~v~i~nRt~~ka~~la~~~~~~~~~~~~l~~~~~~~~divInatp 436 (518)
.-+.||.++|.|.|..|+..+.+|...|++|+|.--++-.|-+.|=+ |.+...+++ ...+.||+|-||.
T Consensus 210 vM~aGKv~Vv~GYGdVGKgCaqaLkg~g~~VivTEiDPI~ALQAaMe-G~~V~tm~e----a~~e~difVTtTG 278 (434)
T KOG1370|consen 210 VMIAGKVAVVCGYGDVGKGCAQALKGFGARVIVTEIDPICALQAAME-GYEVTTLEE----AIREVDIFVTTTG 278 (434)
T ss_pred heecccEEEEeccCccchhHHHHHhhcCcEEEEeccCchHHHHHHhh-ccEeeeHHH----hhhcCCEEEEccC
Confidence 55789999999999999999999999999999999998887654422 233334433 3456788887774
No 479
>PRK08226 short chain dehydrogenase; Provisional
Probab=93.71 E-value=0.15 Score=50.12 Aligned_cols=37 Identities=30% Similarity=0.485 Sum_probs=33.5
Q ss_pred cCCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEeCCHH
Q 010101 365 IAGKIFVLVGA-GGAGRALAFGAKSRGARVIIFNRNYE 401 (518)
Q Consensus 365 l~~k~vlvlGa-Gg~araia~~L~~~G~~v~i~nRt~~ 401 (518)
+++++++|.|+ ||.|++++..|.+.|++|++++|+.+
T Consensus 4 ~~~~~~lItG~s~giG~~la~~l~~~G~~Vv~~~r~~~ 41 (263)
T PRK08226 4 LTGKTALITGALQGIGEGIARVFARHGANLILLDISPE 41 (263)
T ss_pred CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEecCCHH
Confidence 46789999986 78999999999999999999999975
No 480
>cd03174 DRE_TIM_metallolyase DRE-TIM metallolyase superfamily. The DRE-TIM metallolyase superfamily includes 2-isopropylmalate synthase (IPMS), alpha-isopropylmalate synthase (LeuA), 3-hydroxy-3-methylglutaryl-CoA lyase, homocitrate synthase, citramalate synthase, 4-hydroxy-2-oxovalerate aldolase, re-citrate synthase, transcarboxylase 5S, pyruvate carboxylase, AksA, and FrbC. These members all share a conserved triose-phosphate isomerase (TIM) barrel domain consisting of a core beta(8)-alpha(8) motif with the eight parallel beta strands forming an enclosed barrel surrounded by eight alpha helices. The domain has a catalytic center containing a divalent cation-binding site formed by a cluster of invariant residues that cap the core of the barrel. In addition, the catalytic site includes three invariant residues - an aspartate (D), an arginine (R), and a glutamate (E) - which is the basis for the domain name "DRE-TIM".
Probab=93.71 E-value=4.8 Score=39.66 Aligned_cols=198 Identities=17% Similarity=0.122 Sum_probs=118.3
Q ss_pred CHHHHHHHHHHHHhhCCCEEEEEeccC----C--CCcHHHHHHHhcCC-CCcEEEEeecCCCCCCCCCCcHHHHHHHHHH
Q 010101 19 TTEEMQASIEQAKVEGADLVELCIDSM----E--FSHISEVDKLIQHP-TLPAIVSYRLKSSRKSSDEACKNTCLQVLRR 91 (518)
Q Consensus 19 ~~~~~~~~~~~~~~~g~D~vElRlD~l----~--~~~~~~l~~l~~~~-~~PiI~T~R~~~eGG~~~~~~~~~~~~ll~~ 91 (518)
+.++.+.-++...+.|+|.||+=.=-- + .++.+.+..+++.. +.++.+-.|.. .+.++.
T Consensus 17 s~e~~~~i~~~L~~~GV~~IEvg~~~~~~~~p~~~~~~~~i~~l~~~~~~~~~~~l~~~~--------------~~~i~~ 82 (265)
T cd03174 17 STEDKLEIAEALDEAGVDSIEVGSGASPKAVPQMEDDWEVLRAIRKLVPNVKLQALVRNR--------------EKGIER 82 (265)
T ss_pred CHHHHHHHHHHHHHcCCCEEEeccCcCccccccCCCHHHHHHHHHhccCCcEEEEEccCc--------------hhhHHH
Confidence 555555656665668999999743110 1 23344566776544 56665555541 235667
Q ss_pred HhhcCCcEEEEecCCCC----------------chhhHHHhhcCCCcEEEEeeecCCCCC-CChhHHHHHHHHHHHcCCC
Q 010101 92 ALDLDVEFVEMDYEVAS----------------DPLMSEIIYSRSNTKIIVSSYLNGGGK-PTTEKLGDVIACMQATGAD 154 (518)
Q Consensus 92 ~~~~g~~yvDiEl~~~~----------------~~~~~l~~~~~~~~kiI~S~H~f~~~t-p~~~~l~~~~~~~~~~gad 154 (518)
+.+.|++.|-+=+...+ ...+.+..++..+..+.++.-+. ... -+.+++.+.++++.++|+|
T Consensus 83 a~~~g~~~i~i~~~~s~~~~~~~~~~~~~~~~~~~~~~i~~a~~~G~~v~~~~~~~-~~~~~~~~~l~~~~~~~~~~g~~ 161 (265)
T cd03174 83 ALEAGVDEVRIFDSASETHSRKNLNKSREEDLENAEEAIEAAKEAGLEVEGSLEDA-FGCKTDPEYVLEVAKALEEAGAD 161 (265)
T ss_pred HHhCCcCEEEEEEecCHHHHHHHhCCCHHHHHHHHHHHHHHHHHCCCeEEEEEEee-cCCCCCHHHHHHHHHHHHHcCCC
Confidence 77888888887776541 11222222556788888888433 231 2667899999999999999
Q ss_pred EEEEEcccC--CcccHHHHHHHhccC-C-CCEEEEecCC--ccchhhhcCCCCCCcccccccCC-CCCCCCCCHHHHHHH
Q 010101 155 VMKLEIAVD--SITDLAPVFEMLTHC-Q-VPLIALAVGS--RGLISQLLGPKFGGFLVYGSLGG-KSVPGLPTLVSLKQV 227 (518)
Q Consensus 155 ivKia~~~~--~~~D~~~l~~~~~~~-~-~p~i~~~mG~--~G~~sRi~~~~~gs~~ty~~~~~-~sApGQ~~~~~l~~~ 227 (518)
.+-++-+.- +++++.++++...+. + .|+-.=+=-. +|...-+.+-..|....-+++.+ +...|+.+.+++...
T Consensus 162 ~i~l~Dt~G~~~P~~v~~li~~l~~~~~~~~~~~H~Hn~~gla~an~laA~~aG~~~id~s~~G~G~~~Gn~~~e~~~~~ 241 (265)
T cd03174 162 EISLKDTVGLATPEEVAELVKALREALPDVPLGLHTHNTLGLAVANSLAALEAGADRVDGSVNGLGERAGNAATEDLVAA 241 (265)
T ss_pred EEEechhcCCcCHHHHHHHHHHHHHhCCCCeEEEEeCCCCChHHHHHHHHHHcCCCEEEeccccccccccCccHHHHHHH
Confidence 998875543 678888888775543 2 3322111011 12222222223454444455543 367999999998876
Q ss_pred hhhc
Q 010101 228 YQLE 231 (518)
Q Consensus 228 ~~~~ 231 (518)
++..
T Consensus 242 l~~~ 245 (265)
T cd03174 242 LEGL 245 (265)
T ss_pred HHhc
Confidence 6544
No 481
>PRK05855 short chain dehydrogenase; Validated
Probab=93.68 E-value=0.15 Score=56.16 Aligned_cols=47 Identities=32% Similarity=0.532 Sum_probs=42.0
Q ss_pred ccCCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHh
Q 010101 364 PIAGKIFVLVGA-GGAGRALAFGAKSRGARVIIFNRNYERAKALADAV 410 (518)
Q Consensus 364 ~l~~k~vlvlGa-Gg~araia~~L~~~G~~v~i~nRt~~ka~~la~~~ 410 (518)
...+++++|+|+ ||.|++++..|++.|++|.+++|+.++++++++.+
T Consensus 312 ~~~~~~~lv~G~s~giG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~ 359 (582)
T PRK05855 312 PFSGKLVVVTGAGSGIGRETALAFAREGAEVVASDIDEAAAERTAELI 359 (582)
T ss_pred cCCCCEEEEECCcCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHH
Confidence 456789999987 89999999999999999999999999988887765
No 482
>KOG1209 consensus 1-Acyl dihydroxyacetone phosphate reductase and related dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism]
Probab=93.66 E-value=0.21 Score=47.82 Aligned_cols=73 Identities=23% Similarity=0.180 Sum_probs=54.8
Q ss_pred CCcEEEEEcc--chhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHhcCcccccc------------cccccCCCCccEE
Q 010101 366 AGKIFVLVGA--GGAGRALAFGAKSRGARVIIFNRNYERAKALADAVSGEALHFE------------YLHEFFPEKGMIL 431 (518)
Q Consensus 366 ~~k~vlvlGa--Gg~araia~~L~~~G~~v~i~nRt~~ka~~la~~~~~~~~~~~------------~l~~~~~~~~div 431 (518)
..|.|+|.|. ||.|-|++..+.+.|+.|+-+.|..++-.+|+.+++-....++ ++..+.-.+-|++
T Consensus 6 ~~k~VlItgcs~GGIG~ala~ef~~~G~~V~AtaR~~e~M~~L~~~~gl~~~kLDV~~~~~V~~v~~evr~~~~Gkld~L 85 (289)
T KOG1209|consen 6 QPKKVLITGCSSGGIGYALAKEFARNGYLVYATARRLEPMAQLAIQFGLKPYKLDVSKPEEVVTVSGEVRANPDGKLDLL 85 (289)
T ss_pred CCCeEEEeecCCcchhHHHHHHHHhCCeEEEEEccccchHhhHHHhhCCeeEEeccCChHHHHHHHHHHhhCCCCceEEE
Confidence 3578999987 8999999999999999999999999999999988874321111 1111123456899
Q ss_pred EEcCCCC
Q 010101 432 ANASAIG 438 (518)
Q Consensus 432 Inatp~g 438 (518)
+|.....
T Consensus 86 ~NNAG~~ 92 (289)
T KOG1209|consen 86 YNNAGQS 92 (289)
T ss_pred EcCCCCC
Confidence 9876544
No 483
>PRK08278 short chain dehydrogenase; Provisional
Probab=93.64 E-value=0.14 Score=50.94 Aligned_cols=37 Identities=35% Similarity=0.611 Sum_probs=33.4
Q ss_pred cCCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEeCCHH
Q 010101 365 IAGKIFVLVGA-GGAGRALAFGAKSRGARVIIFNRNYE 401 (518)
Q Consensus 365 l~~k~vlvlGa-Gg~araia~~L~~~G~~v~i~nRt~~ 401 (518)
+++|+++|.|+ ||.|++++..|.+.|++|.++.|+.+
T Consensus 4 ~~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~ 41 (273)
T PRK08278 4 LSGKTLFITGASRGIGLAIALRAARDGANIVIAAKTAE 41 (273)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecccc
Confidence 56789999997 78999999999999999999999865
No 484
>KOG2733 consensus Uncharacterized membrane protein [Function unknown]
Probab=93.64 E-value=0.096 Score=53.60 Aligned_cols=112 Identities=21% Similarity=0.252 Sum_probs=78.0
Q ss_pred EEEEEcc-chhHHHHHHHHHH----CCCeEEEEeCCHHHHHHHHHHhcCcc--------ccccc------ccccCCCCcc
Q 010101 369 IFVLVGA-GGAGRALAFGAKS----RGARVIIFNRNYERAKALADAVSGEA--------LHFEY------LHEFFPEKGM 429 (518)
Q Consensus 369 ~vlvlGa-Gg~araia~~L~~----~G~~v~i~nRt~~ka~~la~~~~~~~--------~~~~~------l~~~~~~~~d 429 (518)
.++|.|| |-+|.=++..+.+ .|.++-|.+|+.+|.++..+..+... +-+.| +.+ ....+-
T Consensus 7 DvVIyGASGfTG~yivee~v~~~~~~~~slavAGRn~~KL~~vL~~~~~k~~~~ls~~~i~i~D~~n~~Sl~e-mak~~~ 85 (423)
T KOG2733|consen 7 DVVIYGASGFTGKYIVEEAVSSQVFEGLSLAVAGRNEKKLQEVLEKVGEKTGTDLSSSVILIADSANEASLDE-MAKQAR 85 (423)
T ss_pred eEEEEccccccceeeHHHHhhhhcccCceEEEecCCHHHHHHHHHHHhhccCCCcccceEEEecCCCHHHHHH-HHhhhE
Confidence 5899999 5599999988887 56799999999999999988776322 11111 222 245688
Q ss_pred EEEEcCCCCCCCCCCCCCCChhhhcCCCEEEEEeeCCCc-----hHHHHHHHHCCCeeec
Q 010101 430 ILANASAIGMEPNSDQSPVPKEALKAYELVFDAVYTPRN-----TRLLREAAEVGATVVS 484 (518)
Q Consensus 430 ivInatp~g~~~~~~~~~~~~~~l~~~~~v~Di~Y~P~~-----T~ll~~A~~~G~~~i~ 484 (518)
+||||..+= .....++-..++..+.--+|+.-.|.- -..-+.|+++|.-+++
T Consensus 86 vivN~vGPy---R~hGE~VVkacienG~~~vDISGEP~f~E~mq~kYhd~A~ekGVYIVs 142 (423)
T KOG2733|consen 86 VIVNCVGPY---RFHGEPVVKACIENGTHHVDISGEPQFMERMQLKYHDLAKEKGVYIVS 142 (423)
T ss_pred EEEeccccc---eecCcHHHHHHHHcCCceeccCCCHHHHHHHHHHHHHHHHhcCeEEEe
Confidence 999998531 112345556778888889999988863 3344578888765553
No 485
>COG1063 Tdh Threonine dehydrogenase and related Zn-dependent dehydrogenases [Amino acid transport and metabolism / General function prediction only]
Probab=93.63 E-value=0.26 Score=51.36 Aligned_cols=69 Identities=30% Similarity=0.278 Sum_probs=49.1
Q ss_pred CcEEEEEccchhHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHH-hcCccccc--c-c----ccc-cCCCCccEEEEcCC
Q 010101 367 GKIFVLVGAGGAGRALAFGAKSRGA-RVIIFNRNYERAKALADA-VSGEALHF--E-Y----LHE-FFPEKGMILANASA 436 (518)
Q Consensus 367 ~k~vlvlGaGg~araia~~L~~~G~-~v~i~nRt~~ka~~la~~-~~~~~~~~--~-~----l~~-~~~~~~divInatp 436 (518)
+.+|+|+|+|.+|..++..+...|+ +|.+++++++|.+ +|++ ++...... + + ... ..-..+|++|.||.
T Consensus 169 ~~~V~V~GaGpIGLla~~~a~~~Ga~~Viv~d~~~~Rl~-~A~~~~g~~~~~~~~~~~~~~~~~~~t~g~g~D~vie~~G 247 (350)
T COG1063 169 GGTVVVVGAGPIGLLAIALAKLLGASVVIVVDRSPERLE-LAKEAGGADVVVNPSEDDAGAEILELTGGRGADVVIEAVG 247 (350)
T ss_pred CCEEEEECCCHHHHHHHHHHHHcCCceEEEeCCCHHHHH-HHHHhCCCeEeecCccccHHHHHHHHhCCCCCCEEEECCC
Confidence 3489999999999999888889998 9999999999974 5555 55432211 1 0 001 01135899999997
No 486
>PRK12439 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Provisional
Probab=93.61 E-value=0.14 Score=53.18 Aligned_cols=69 Identities=17% Similarity=0.196 Sum_probs=49.4
Q ss_pred cEEEEEccchhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHh-cCcc----c------cc-ccccccCCCCccEEEEcC
Q 010101 368 KIFVLVGAGGAGRALAFGAKSRGARVIIFNRNYERAKALADAV-SGEA----L------HF-EYLHEFFPEKGMILANAS 435 (518)
Q Consensus 368 k~vlvlGaGg~araia~~L~~~G~~v~i~nRt~~ka~~la~~~-~~~~----~------~~-~~l~~~~~~~~divInat 435 (518)
.++.|+|+|.+|.+++..|++.| +++++.|+++..+++.+.- +... . .. .++.+ ....+|+||-++
T Consensus 8 mkI~IiGaGa~G~alA~~La~~g-~v~l~~~~~~~~~~i~~~~~~~~~l~~~~~l~~~i~~t~d~~~-a~~~aDlVilav 85 (341)
T PRK12439 8 PKVVVLGGGSWGTTVASICARRG-PTLQWVRSAETADDINDNHRNSRYLGNDVVLSDTLRATTDFAE-AANCADVVVMGV 85 (341)
T ss_pred CeEEEECCCHHHHHHHHHHHHCC-CEEEEeCCHHHHHHHHhcCCCcccCCCCcccCCCeEEECCHHH-HHhcCCEEEEEe
Confidence 57999999999999999999988 7888899999988876531 1110 0 01 12222 345689999998
Q ss_pred CCC
Q 010101 436 AIG 438 (518)
Q Consensus 436 p~g 438 (518)
|..
T Consensus 86 ps~ 88 (341)
T PRK12439 86 PSH 88 (341)
T ss_pred CHH
Confidence 853
No 487
>TIGR02632 RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alcohol dehydrogenase.
Probab=93.59 E-value=0.17 Score=57.50 Aligned_cols=48 Identities=31% Similarity=0.513 Sum_probs=42.4
Q ss_pred cccCCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHh
Q 010101 363 SPIAGKIFVLVGA-GGAGRALAFGAKSRGARVIIFNRNYERAKALADAV 410 (518)
Q Consensus 363 ~~l~~k~vlvlGa-Gg~araia~~L~~~G~~v~i~nRt~~ka~~la~~~ 410 (518)
.++.+|+++|.|+ ||.|++++..|.+.|++|.+++|+.++++++.+.+
T Consensus 410 ~~l~gkvvLVTGasggIG~aiA~~La~~Ga~Vvi~~r~~~~~~~~~~~l 458 (676)
T TIGR02632 410 KTLARRVAFVTGGAGGIGRETARRLAAEGAHVVLADLNLEAAEAVAAEI 458 (676)
T ss_pred cCCCCCEEEEeCCCcHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHH
Confidence 4577899999987 78999999999999999999999999888776654
No 488
>PRK05693 short chain dehydrogenase; Provisional
Probab=93.59 E-value=0.15 Score=50.57 Aligned_cols=41 Identities=37% Similarity=0.468 Sum_probs=36.2
Q ss_pred cEEEEEcc-chhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHH
Q 010101 368 KIFVLVGA-GGAGRALAFGAKSRGARVIIFNRNYERAKALAD 408 (518)
Q Consensus 368 k~vlvlGa-Gg~araia~~L~~~G~~v~i~nRt~~ka~~la~ 408 (518)
|+++|.|+ ||.|++++..|.+.|++|++++|+.++.+.+.+
T Consensus 2 k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~ 43 (274)
T PRK05693 2 PVVLITGCSSGIGRALADAFKAAGYEVWATARKAEDVEALAA 43 (274)
T ss_pred CEEEEecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH
Confidence 57999987 789999999999999999999999888776653
No 489
>PRK06482 short chain dehydrogenase; Provisional
Probab=93.59 E-value=0.17 Score=50.24 Aligned_cols=71 Identities=20% Similarity=0.261 Sum_probs=50.5
Q ss_pred cEEEEEcc-chhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHhcCcc----ccccc---cccc------CCCCccEEEE
Q 010101 368 KIFVLVGA-GGAGRALAFGAKSRGARVIIFNRNYERAKALADAVSGEA----LHFEY---LHEF------FPEKGMILAN 433 (518)
Q Consensus 368 k~vlvlGa-Gg~araia~~L~~~G~~v~i~nRt~~ka~~la~~~~~~~----~~~~~---l~~~------~~~~~divIn 433 (518)
|++||.|+ |+.|++++..|.+.|++|+++.|+.++.+.+.+..+... .++.+ +... .....|+|||
T Consensus 3 k~vlVtGasg~IG~~la~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~ 82 (276)
T PRK06482 3 KTWFITGASSGFGRGMTERLLARGDRVAATVRRPDALDDLKARYGDRLWVLQLDVTDSAAVRAVVDRAFAALGRIDVVVS 82 (276)
T ss_pred CEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhccCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence 67999986 789999999999999999999999988887766543221 12211 1110 1234699999
Q ss_pred cCCCC
Q 010101 434 ASAIG 438 (518)
Q Consensus 434 atp~g 438 (518)
+....
T Consensus 83 ~ag~~ 87 (276)
T PRK06482 83 NAGYG 87 (276)
T ss_pred CCCCC
Confidence 87654
No 490
>cd01485 E1-1_like Ubiquitin activating enzyme (E1), repeat 1-like. E1, a highly conserved small protein present universally in eukaryotic cells, is part of cascade to attach ubiquitin (Ub) covalently to substrate proteins. This cascade consists of activating (E1), conjugating (E2), and/or ligating (E3) enzymes and then targets them for degradation by the 26S proteasome. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and ubiquitin's C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. A set of novel molecules with a structural similarity to Ub, called Ub-like proteins (Ubls), have similar conjugation cascades. In contrast to ubiquitin-E1, which is a single-chain protein with a weakly conserved two-fold repeat, many of the Ubls-E1are a heterodimer where each subunit corresponds to one half of a single-chain E1. This CD represents the family homol
Probab=93.59 E-value=0.09 Score=50.20 Aligned_cols=36 Identities=19% Similarity=0.379 Sum_probs=32.7
Q ss_pred cCCcEEEEEccchhHHHHHHHHHHCCC-eEEEEeCCH
Q 010101 365 IAGKIFVLVGAGGAGRALAFGAKSRGA-RVIIFNRNY 400 (518)
Q Consensus 365 l~~k~vlvlGaGg~araia~~L~~~G~-~v~i~nRt~ 400 (518)
+++++|+|+|+||.|..++..|+..|+ +|++++.+.
T Consensus 17 L~~s~VlviG~gglGsevak~L~~~GVg~i~lvD~d~ 53 (198)
T cd01485 17 LRSAKVLIIGAGALGAEIAKNLVLAGIDSITIVDHRL 53 (198)
T ss_pred HhhCcEEEECCCHHHHHHHHHHHHcCCCEEEEEECCc
Confidence 457899999999999999999999999 999998763
No 491
>PRK11730 fadB multifunctional fatty acid oxidation complex subunit alpha; Reviewed
Probab=93.56 E-value=0.16 Score=57.97 Aligned_cols=38 Identities=29% Similarity=0.414 Sum_probs=34.8
Q ss_pred cEEEEEccchhHHHHHHHHHHCCCeEEEEeCCHHHHHH
Q 010101 368 KIFVLVGAGGAGRALAFGAKSRGARVIIFNRNYERAKA 405 (518)
Q Consensus 368 k~vlvlGaGg~araia~~L~~~G~~v~i~nRt~~ka~~ 405 (518)
++|.|||+|-||+.|++.++..|++|++++++.+..+.
T Consensus 314 ~~v~ViGaG~mG~gIA~~~a~~G~~V~l~d~~~~~l~~ 351 (715)
T PRK11730 314 KQAAVLGAGIMGGGIAYQSASKGVPVIMKDINQKALDL 351 (715)
T ss_pred ceEEEECCchhHHHHHHHHHhCCCeEEEEeCCHHHHHH
Confidence 68999999999999999999999999999999886544
No 492
>PRK14041 oxaloacetate decarboxylase; Provisional
Probab=93.55 E-value=5.1 Score=43.42 Aligned_cols=208 Identities=11% Similarity=0.096 Sum_probs=123.5
Q ss_pred CHHHHHHHHHHHHhhCCCEEEE----Eecc----CCCCcHHHHHHHhcC-CCCcEEEEeecCCCCCCCCCCcHHHHHHHH
Q 010101 19 TTEEMQASIEQAKVEGADLVEL----CIDS----MEFSHISEVDKLIQH-PTLPAIVSYRLKSSRKSSDEACKNTCLQVL 89 (518)
Q Consensus 19 ~~~~~~~~~~~~~~~g~D~vEl----RlD~----l~~~~~~~l~~l~~~-~~~PiI~T~R~~~eGG~~~~~~~~~~~~ll 89 (518)
+.++.+.-++..-+.|.+.||. ..|. +.+++.+.++.+++. .+.++..-+|..+--|...-. ++.....+
T Consensus 23 ~t~dkl~Ia~~Ld~~Gv~~IE~~ggatfd~~~~Fl~e~p~e~l~~l~~~~~~~~l~~l~r~~N~~G~~~~~-dDvv~~fv 101 (467)
T PRK14041 23 RTEDMLPALEAFDRMGFYSMEVWGGATFDVCVRFLNENPWERLKEIRKRLKNTKIQMLLRGQNLVGYRHYA-DDVVELFV 101 (467)
T ss_pred CHHHHHHHHHHHHHcCCCEEEecCCccchhhhcccCCCHHHHHHHHHHhCCCCEEEEEeccccccCccccc-chhhHHHH
Confidence 3444444444445579999999 4553 235666778888764 467777777876665653333 55666778
Q ss_pred HHHhhcCCcEEEEecCCCC--chhhHHHhhcCCCcEEEEeeecCCCCCC--ChhHHHHHHHHHHHcCCCEEEEEcccC--
Q 010101 90 RRALDLDVEFVEMDYEVAS--DPLMSEIIYSRSNTKIIVSSYLNGGGKP--TTEKLGDVIACMQATGADVMKLEIAVD-- 163 (518)
Q Consensus 90 ~~~~~~g~~yvDiEl~~~~--~~~~~l~~~~~~~~kiI~S~H~f~~~tp--~~~~l~~~~~~~~~~gadivKia~~~~-- 163 (518)
+.+++.|++.|-|=....+ .....+..++..+..+.++.... .+| +.+.+.++.+++.+.|+|.+-|+=|+-
T Consensus 102 ~~A~~~Gvd~irif~~lnd~~n~~~~i~~ak~~G~~v~~~i~~t--~~p~~t~e~~~~~a~~l~~~Gad~I~i~Dt~G~l 179 (467)
T PRK14041 102 KKVAEYGLDIIRIFDALNDIRNLEKSIEVAKKHGAHVQGAISYT--VSPVHTLEYYLEFARELVDMGVDSICIKDMAGLL 179 (467)
T ss_pred HHHHHCCcCEEEEEEeCCHHHHHHHHHHHHHHCCCEEEEEEEec--cCCCCCHHHHHHHHHHHHHcCCCEEEECCccCCc
Confidence 9999999998877655432 11112222444455555444322 224 567899999999999999998887775
Q ss_pred CcccHHHHHHHhcc-CCCCEEEEe--cCCccchhhhcCCCCCCcccccccCC-CCCCCCCCHHHHHHHhh
Q 010101 164 SITDLAPVFEMLTH-CQVPLIALA--VGSRGLISQLLGPKFGGFLVYGSLGG-KSVPGLPTLVSLKQVYQ 229 (518)
Q Consensus 164 ~~~D~~~l~~~~~~-~~~p~i~~~--mG~~G~~sRi~~~~~gs~~ty~~~~~-~sApGQ~~~~~l~~~~~ 229 (518)
++.++.++.+.++. .+.|+-.=+ .--+|..+-+.+-..|....-+++.+ +.-.||++.+++...++
T Consensus 180 ~P~~v~~Lv~~lk~~~~vpI~~H~Hnt~GlA~AN~laAieaGad~vD~sv~~~g~gagN~atE~lv~~L~ 249 (467)
T PRK14041 180 TPKRAYELVKALKKKFGVPVEVHSHCTTGLASLAYLAAVEAGADMFDTAISPFSMGTSQPPFESMYYAFR 249 (467)
T ss_pred CHHHHHHHHHHHHHhcCCceEEEecCCCCcHHHHHHHHHHhCCCEEEeeccccCCCCCChhHHHHHHHHH
Confidence 67788888776543 244431111 11122233333333454444444432 12346888888776654
No 493
>PLN02172 flavin-containing monooxygenase FMO GS-OX
Probab=93.52 E-value=0.49 Score=51.21 Aligned_cols=141 Identities=16% Similarity=0.138 Sum_probs=0.0
Q ss_pred ccCCcEEEEEccchhHHHHHHHHHHCCCeEEEEeCCHHHHH---------------HHHHHhcCcccccccccccCCCCc
Q 010101 364 PIAGKIFVLVGAGGAGRALAFGAKSRGARVIIFNRNYERAK---------------ALADAVSGEALHFEYLHEFFPEKG 428 (518)
Q Consensus 364 ~l~~k~vlvlGaGg~araia~~L~~~G~~v~i~nRt~~ka~---------------~la~~~~~~~~~~~~l~~~~~~~~ 428 (518)
.++||+|+|||+|..|.-+|..|...+.+|+++.|...... .+....+...+.+.+-.. ..+
T Consensus 201 ~~~gk~VvVVG~G~Sg~diA~~L~~~a~~V~l~~r~~~~~~~~~~~~~~~~v~~~~~I~~~~~~g~V~f~DG~~---~~~ 277 (461)
T PLN02172 201 PFKNEVVVVIGNFASGADISRDIAKVAKEVHIASRASESDTYEKLPVPQNNLWMHSEIDTAHEDGSIVFKNGKV---VYA 277 (461)
T ss_pred ccCCCEEEEECCCcCHHHHHHHHHHhCCeEEEEEeeccccccccCcCCCCceEECCcccceecCCeEEECCCCC---ccC
Q ss_pred cEEEEcCCCCCCCCCCCCCCChhhhcCCCEEEEEeeCCCchHHHHHHHHCCC----------eeeccHHHHHHHHHHHHH
Q 010101 429 MILANASAIGMEPNSDQSPVPKEALKAYELVFDAVYTPRNTRLLREAAEVGA----------TVVSGVEMFIRQALGQFR 498 (518)
Q Consensus 429 divInatp~g~~~~~~~~~~~~~~l~~~~~v~Di~Y~P~~T~ll~~A~~~G~----------~~i~G~~ml~~Qa~~qf~ 498 (518)
|.||-|| |..+..+... ..+.+..| .....+|.+..=--.. .......|+-.||..--+
T Consensus 278 D~Ii~~T--Gy~~~~pfL~------~~~~i~v~---~~~v~~Ly~~~f~~~~~p~LafiG~~~~~~~f~~~E~Qa~~~a~ 346 (461)
T PLN02172 278 DTIVHCT--GYKYHFPFLE------TNGYMRID---ENRVEPLYKHVFPPALAPGLSFIGLPAMGIQFVMFEIQSKWVAA 346 (461)
T ss_pred CEEEECC--cCCccccccC------cccceeeC---CCcchhhHHhhcCCCCCCcEEEEeccccccCchhHHHHHHHHHH
Q ss_pred HhcCC--CCCHHHHHHHHHhhC
Q 010101 499 LFTGG--LAPEDFMRKLVLEQF 518 (518)
Q Consensus 499 lw~g~--~~p~~~~~~~~~~~~ 518 (518)
.|.|+ -++.+.|++.+.+.|
T Consensus 347 v~sG~~~LPs~~~m~~~~~~~~ 368 (461)
T PLN02172 347 VLSGRVTLPSEDKMMEDINAWY 368 (461)
T ss_pred HHcCCCCCcCHHHHHHHHHHHH
No 494
>PRK06300 enoyl-(acyl carrier protein) reductase; Provisional
Probab=93.50 E-value=0.14 Score=52.11 Aligned_cols=36 Identities=28% Similarity=0.460 Sum_probs=32.1
Q ss_pred cccCCcEEEEEccc---hhHHHHHHHHHHCCCeEEEEeC
Q 010101 363 SPIAGKIFVLVGAG---GAGRALAFGAKSRGARVIIFNR 398 (518)
Q Consensus 363 ~~l~~k~vlvlGaG---g~araia~~L~~~G~~v~i~nR 398 (518)
..++||.++|.|+| |+|+++|..|++.|++|.+..|
T Consensus 4 ~~~~gk~alITGa~~~~GIG~a~A~~la~~Ga~Vvv~~~ 42 (299)
T PRK06300 4 IDLTGKIAFIAGIGDDQGYGWGIAKALAEAGATILVGTW 42 (299)
T ss_pred cCCCCCEEEEeCCCCCCCHHHHHHHHHHHCCCEEEEEec
Confidence 35789999999996 9999999999999999998654
No 495
>PRK07775 short chain dehydrogenase; Provisional
Probab=93.48 E-value=0.19 Score=49.97 Aligned_cols=46 Identities=26% Similarity=0.350 Sum_probs=39.3
Q ss_pred cCCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHh
Q 010101 365 IAGKIFVLVGA-GGAGRALAFGAKSRGARVIIFNRNYERAKALADAV 410 (518)
Q Consensus 365 l~~k~vlvlGa-Gg~araia~~L~~~G~~v~i~nRt~~ka~~la~~~ 410 (518)
.+.++++|.|+ |+.|++++..|.+.|++|+++.|+.++.+++.+.+
T Consensus 8 ~~~~~vlVtGa~g~iG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~ 54 (274)
T PRK07775 8 PDRRPALVAGASSGIGAATAIELAAAGFPVALGARRVEKCEELVDKI 54 (274)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHH
Confidence 45678999997 78999999999999999999999988877766544
No 496
>PLN02662 cinnamyl-alcohol dehydrogenase family protein
Probab=93.47 E-value=0.15 Score=51.81 Aligned_cols=37 Identities=27% Similarity=0.230 Sum_probs=32.6
Q ss_pred CcEEEEEcc-chhHHHHHHHHHHCCCeEEEEeCCHHHH
Q 010101 367 GKIFVLVGA-GGAGRALAFGAKSRGARVIIFNRNYERA 403 (518)
Q Consensus 367 ~k~vlvlGa-Gg~araia~~L~~~G~~v~i~nRt~~ka 403 (518)
++++||.|+ |..|+.++..|.+.|++|+++.|+.++.
T Consensus 4 ~~~ilVtGatGfIG~~l~~~L~~~g~~V~~~~r~~~~~ 41 (322)
T PLN02662 4 GKVVCVTGASGYIASWLVKLLLQRGYTVKATVRDPNDP 41 (322)
T ss_pred CCEEEEECChHHHHHHHHHHHHHCCCEEEEEEcCCCch
Confidence 689999995 8899999999999999999999886543
No 497
>COG1712 Predicted dinucleotide-utilizing enzyme [General function prediction only]
Probab=93.46 E-value=0.2 Score=48.34 Aligned_cols=115 Identities=21% Similarity=0.211 Sum_probs=72.1
Q ss_pred EEEEEccchhHHHHHHHHHHC--CC-eEEEEeCCHHHHHHHHHHhcCcccccccccccCCCCccEEEEcCCCCCCCCCCC
Q 010101 369 IFVLVGAGGAGRALAFGAKSR--GA-RVIIFNRNYERAKALADAVSGEALHFEYLHEFFPEKGMILANASAIGMEPNSDQ 445 (518)
Q Consensus 369 ~vlvlGaGg~araia~~L~~~--G~-~v~i~nRt~~ka~~la~~~~~~~~~~~~l~~~~~~~~divInatp~g~~~~~~~ 445 (518)
++.++|.|..|..++..+..- ++ -+.+++|+.++++++++.++.... .++.+ .....|++|.|.+..-. .
T Consensus 2 ~vgiVGcGaIG~~l~e~v~~~~~~~e~v~v~D~~~ek~~~~~~~~~~~~~--s~ide-~~~~~DlvVEaAS~~Av----~ 74 (255)
T COG1712 2 KVGIVGCGAIGKFLLELVRDGRVDFELVAVYDRDEEKAKELEASVGRRCV--SDIDE-LIAEVDLVVEAASPEAV----R 74 (255)
T ss_pred eEEEEeccHHHHHHHHHHhcCCcceeEEEEecCCHHHHHHHHhhcCCCcc--ccHHH-HhhccceeeeeCCHHHH----H
Confidence 578999999999998877642 36 699999999999999998876443 33334 33668999988764311 0
Q ss_pred CCCChhhhcCCCEEEEEeeC----CC-chHHHHHHHHCCCe------eeccHHHHHH
Q 010101 446 SPVPKEALKAYELVFDAVYT----PR-NTRLLREAAEVGAT------VVSGVEMFIR 491 (518)
Q Consensus 446 ~~~~~~~l~~~~~v~Di~Y~----P~-~T~ll~~A~~~G~~------~i~G~~ml~~ 491 (518)
..-+..|..+.-++=|+-. |. ...+-..|+..|++ .+.|++.|-.
T Consensus 75 -e~~~~~L~~g~d~iV~SVGALad~~l~erl~~lak~~~~rv~~pSGAiGGlD~l~a 130 (255)
T COG1712 75 -EYVPKILKAGIDVIVMSVGALADEGLRERLRELAKCGGARVYLPSGAIGGLDALAA 130 (255)
T ss_pred -HHhHHHHhcCCCEEEEechhccChHHHHHHHHHHhcCCcEEEecCccchhHHHHHH
Confidence 1122334443323323222 22 23455566777776 3567776644
No 498
>cd08293 PTGR2 Prostaglandin reductase. Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acid
Probab=93.44 E-value=0.22 Score=51.08 Aligned_cols=70 Identities=21% Similarity=0.324 Sum_probs=51.3
Q ss_pred CcEEEEEcc-chhHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHHhcCcc-cccc--c----ccccCCCCccEEEEcCC
Q 010101 367 GKIFVLVGA-GGAGRALAFGAKSRGA-RVIIFNRNYERAKALADAVSGEA-LHFE--Y----LHEFFPEKGMILANASA 436 (518)
Q Consensus 367 ~k~vlvlGa-Gg~araia~~L~~~G~-~v~i~nRt~~ka~~la~~~~~~~-~~~~--~----l~~~~~~~~divInatp 436 (518)
+.+++|.|+ |+.|.+++..++..|+ +|+.+.++.++.+.+.+++|... +... + +.+......|+++++++
T Consensus 155 ~~~VlI~ga~g~vG~~aiqlAk~~G~~~Vi~~~~s~~~~~~~~~~lGa~~vi~~~~~~~~~~i~~~~~~gvd~vid~~g 233 (345)
T cd08293 155 NQTMVVSGAAGACGSLAGQIGRLLGCSRVVGICGSDEKCQLLKSELGFDAAINYKTDNVAERLRELCPEGVDVYFDNVG 233 (345)
T ss_pred CCEEEEECCCcHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHhcCCcEEEECCCCCHHHHHHHHCCCCceEEEECCC
Confidence 379999998 9999999888888999 89999999999887777677532 1111 1 11111245899999875
No 499
>cd05297 GH4_alpha_glucosidase_galactosidase Glycoside Hydrolases Family 4; Alpha-glucosidases and alpha-galactosidases. linked to 3D####ucture
Probab=93.41 E-value=0.12 Score=55.39 Aligned_cols=72 Identities=14% Similarity=0.172 Sum_probs=48.7
Q ss_pred EEEEEccchhHHHHHH--HHH----HCCCeEEEEeCCHHHHHHHHHHhcC------ccccc---ccccccCCCCccEEEE
Q 010101 369 IFVLVGAGGAGRALAF--GAK----SRGARVIIFNRNYERAKALADAVSG------EALHF---EYLHEFFPEKGMILAN 433 (518)
Q Consensus 369 ~vlvlGaGg~araia~--~L~----~~G~~v~i~nRt~~ka~~la~~~~~------~~~~~---~~l~~~~~~~~divIn 433 (518)
++.|||+|.+|.+.+. .++ ..|.+|.++++++++++.+...... ....+ .++.+ .+.++|+||+
T Consensus 2 KIaIIGaGs~G~a~a~~~~i~~~~~~~g~eV~L~Did~e~l~~~~~~~~~~~~~~~~~~~I~~ttD~~e-al~~AD~Vi~ 80 (423)
T cd05297 2 KIAFIGAGSVVFTKNLVGDLLKTPELSGSTIALMDIDEERLETVEILAKKIVEELGAPLKIEATTDRRE-ALDGADFVIN 80 (423)
T ss_pred eEEEECCChHHhHHHHHHHHhcCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHhcCCCeEEEEeCCHHH-HhcCCCEEEE
Confidence 6899999988887555 444 2345899999999998887654421 00111 23333 5678999999
Q ss_pred cCCCCCCC
Q 010101 434 ASAIGMEP 441 (518)
Q Consensus 434 atp~g~~~ 441 (518)
+.++|..+
T Consensus 81 ai~~~~~~ 88 (423)
T cd05297 81 TIQVGGHE 88 (423)
T ss_pred eeEecCcc
Confidence 99976544
No 500
>cd05188 MDR Medium chain reductase/dehydrogenase (MDR)/zinc-dependent alcohol dehydrogenase-like family. The medium chain reductase/dehydrogenases (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH) , quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydro
Probab=93.40 E-value=0.3 Score=47.59 Aligned_cols=94 Identities=20% Similarity=0.186 Sum_probs=58.8
Q ss_pred CCcEEEEEccchhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHhcCcc-cccccc--c----ccCCCCccEEEEcCCCC
Q 010101 366 AGKIFVLVGAGGAGRALAFGAKSRGARVIIFNRNYERAKALADAVSGEA-LHFEYL--H----EFFPEKGMILANASAIG 438 (518)
Q Consensus 366 ~~k~vlvlGaGg~araia~~L~~~G~~v~i~nRt~~ka~~la~~~~~~~-~~~~~l--~----~~~~~~~divInatp~g 438 (518)
.+.+++|.|+|++|++++..+...|.+|+++.++.++.+.+ +.++... +...+. . .......|+++++++..
T Consensus 134 ~~~~vli~g~~~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~~~~ 212 (271)
T cd05188 134 PGDTVLVLGAGGVGLLAAQLAKAAGARVIVTDRSDEKLELA-KELGADHVIDYKEEDLEEELRLTGGGGADVVIDAVGGP 212 (271)
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCeEEEEcCCHHHHHHH-HHhCCceeccCCcCCHHHHHHHhcCCCCCEEEECCCCH
Confidence 57899999999999999988888999999999998876655 4454321 111110 0 00124589999987631
Q ss_pred CCCCCCCCCCChhhhcCCCEEEEEeeC
Q 010101 439 MEPNSDQSPVPKEALKAYELVFDAVYT 465 (518)
Q Consensus 439 ~~~~~~~~~~~~~~l~~~~~v~Di~Y~ 465 (518)
.. .......+.+...++++.-.
T Consensus 213 ~~-----~~~~~~~l~~~G~~v~~~~~ 234 (271)
T cd05188 213 ET-----LAQALRLLRPGGRIVVVGGT 234 (271)
T ss_pred HH-----HHHHHHhcccCCEEEEEccC
Confidence 00 00112345566666666543
Done!