Query 010105
Match_columns 518
No_of_seqs 233 out of 391
Neff 5.4
Searched_HMMs 29240
Date Mon Mar 25 20:00:32 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/010105.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/010105hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3b7y_A E3 ubiquitin-protein li 97.8 0.00031 1.1E-08 62.6 13.3 125 334-464 21-153 (153)
2 2dmh_A Myoferlin; beta-sandwic 97.7 0.00075 2.6E-08 59.0 13.7 121 335-468 9-137 (140)
3 1v27_A Regulating synaptic mem 97.5 0.0012 4.2E-08 57.5 12.2 107 334-448 22-137 (141)
4 2b3r_A Phosphatidylinositol-4- 97.5 0.0012 4E-08 58.1 11.7 103 335-446 22-132 (134)
5 2d8k_A Synaptotagmin VII; exoc 97.4 0.0011 3.8E-08 58.2 11.0 106 334-448 27-139 (141)
6 3m7f_B E3 ubiquitin-protein li 97.4 0.0017 5.8E-08 59.5 12.5 126 334-465 9-142 (176)
7 3kwu_A MUNC13-1; calcium bindi 97.3 0.0055 1.9E-07 54.0 14.8 122 333-463 17-146 (148)
8 3fbk_A RGS3, RGP3, regulator o 97.3 0.0011 3.8E-08 59.3 9.8 107 335-448 29-141 (153)
9 3n5a_A Synaptotagmin-7; calciu 97.3 0.0013 4.4E-08 57.0 9.7 104 335-444 18-138 (138)
10 3fdw_A Synaptotagmin-like prot 97.3 0.00074 2.5E-08 60.0 8.1 108 335-451 25-141 (148)
11 3f04_A Synaptotagmin-1; C2A, c 97.2 0.0019 6.6E-08 56.7 10.5 101 335-444 36-142 (143)
12 1a25_A CALB, protein kinase C 97.2 0.0022 7.5E-08 56.9 10.8 102 335-445 33-140 (149)
13 1w15_A Synaptotagmin IV; metal 97.2 0.0014 4.8E-08 58.3 9.3 105 334-445 31-153 (153)
14 2cm5_A Rabphilin-3A; protein t 97.2 0.0018 6.2E-08 58.6 10.1 106 335-447 39-162 (166)
15 1wfj_A Putative elicitor-respo 97.1 0.0016 5.5E-08 56.6 8.9 117 334-465 11-131 (136)
16 2ep6_A MCTP2 protein; beta san 97.1 0.0054 1.8E-07 53.2 12.2 114 335-462 15-130 (133)
17 1rlw_A Phospholipase A2, CALB 97.1 0.0049 1.7E-07 52.7 11.7 113 335-463 5-124 (126)
18 1tjx_A Similar to synaptotagmi 97.1 0.0029 1E-07 56.7 10.1 105 334-445 26-148 (159)
19 2dmg_A KIAA1228 protein; beta- 97.0 0.0025 8.5E-08 55.9 9.4 107 335-448 26-139 (142)
20 3pyc_A E3 ubiquitin-protein li 97.0 0.0071 2.4E-07 52.4 12.1 124 333-461 5-130 (132)
21 2q3x_A Regulating synaptic mem 97.0 0.0018 6.2E-08 59.3 8.6 107 334-448 31-143 (171)
22 2enp_A B/K protein; C2 type 1, 97.0 0.0035 1.2E-07 55.3 10.2 104 334-448 27-145 (147)
23 3rdl_A Protein kinase C alpha 97.0 0.0038 1.3E-07 54.0 10.2 104 335-447 18-127 (137)
24 1rsy_A Synaptotagmin I; calciu 97.0 0.0043 1.5E-07 55.3 10.4 102 335-445 44-151 (152)
25 1gmi_A Protein kinase C, epsil 97.0 0.006 2.1E-07 53.3 11.0 115 334-464 7-133 (136)
26 2bwq_A Regulating synaptic mem 96.9 0.0049 1.7E-07 52.9 9.9 100 335-442 20-128 (129)
27 2r83_A Synaptotagmin-1; C2A-C2 96.9 0.016 5.4E-07 56.5 14.3 123 334-465 20-148 (284)
28 1ugk_A Synaptotagmin IV, KIAA1 96.8 0.013 4.3E-07 51.1 12.2 105 335-447 24-136 (138)
29 2nq3_A Itchy homolog E3 ubiqui 96.8 0.0065 2.2E-07 56.2 10.4 119 334-461 37-158 (173)
30 1rh8_A Piccolo protein; beta-s 96.7 0.0073 2.5E-07 52.8 9.2 106 334-447 19-141 (142)
31 2fk9_A Protein kinase C, ETA t 96.6 0.015 5E-07 53.4 11.3 104 334-444 30-145 (157)
32 2z0u_A WW domain-containing pr 96.5 0.012 4.2E-07 53.2 10.0 102 335-444 45-155 (155)
33 2chd_A Rabphilin-3A, exophilin 96.3 0.033 1.1E-06 48.6 11.0 101 335-444 31-140 (142)
34 2r83_A Synaptotagmin-1; C2A-C2 96.1 0.019 6.6E-07 55.8 9.6 105 334-445 151-273 (284)
35 1wfm_A Synaptotagmin XIII; C2 95.8 0.062 2.1E-06 47.0 10.6 101 335-447 28-135 (138)
36 1dqv_A Synaptotagmin III; beta 95.2 0.012 4E-07 58.3 4.0 107 334-447 153-278 (296)
37 2cjt_A UNC-13 homolog A, MUNC1 94.5 0.39 1.3E-05 41.9 11.7 95 334-443 6-103 (131)
38 1dqv_A Synaptotagmin III; beta 94.3 0.42 1.4E-05 47.0 12.5 121 334-465 21-150 (296)
39 3jzy_A Intersectin 2; C2 domai 92.5 0.4 1.4E-05 50.5 9.6 107 331-445 385-495 (510)
40 2cjs_A UNC-13 homolog A, MUNC1 92.5 0.68 2.3E-05 42.4 9.9 82 334-430 15-100 (167)
41 3l9b_A Otoferlin; C2-domain, b 90.9 0.98 3.4E-05 41.1 8.9 118 332-466 20-142 (144)
42 1cjy_A CPLA2, protein (cytosol 89.1 1.2 4E-05 50.5 9.7 101 333-445 18-127 (749)
43 1djx_A PLC-D1, phosphoinositid 87.3 3.9 0.00013 45.0 12.3 121 328-462 492-622 (624)
44 3bxj_A RAS GTPase-activating p 86.6 0.12 4E-06 55.3 -0.4 99 335-445 13-117 (483)
45 3nsj_A Perforin-1; pore formin 86.0 13 0.00045 40.2 15.4 123 332-476 393-518 (540)
46 3pfq_A PKC-B, PKC-beta, protei 78.1 5.4 0.00018 43.9 8.7 103 335-447 174-283 (674)
47 3ohm_B 1-phosphatidylinositol- 31.6 2.7E+02 0.0091 32.1 11.7 114 334-466 726-849 (885)
48 3qr0_A Phospholipase C-beta (P 30.6 2.2E+02 0.0077 32.3 10.8 111 333-461 650-770 (816)
49 2zkm_X 1-phosphatidylinositol- 29.3 2.9E+02 0.01 31.2 11.5 96 334-447 679-783 (799)
50 2qzq_A Axin interactor, dorsal 24.5 3.7E+02 0.013 24.4 9.0 123 331-463 14-151 (152)
No 1
>3b7y_A E3 ubiquitin-protein ligase NEDD4; C2 domain, UBL-conjugation pathway, structural genomics consortium, SGC, cytoplasm; 1.80A {Homo sapiens} PDB: 2nsq_A
Probab=97.80 E-value=0.00031 Score=62.59 Aligned_cols=125 Identities=20% Similarity=0.203 Sum_probs=82.3
Q ss_pred EEEEEEEeecCCCCCcC-CCCceEEEEeccC-CCcccccccceee--eeccccceeEEEEee-ccccEEEEEEecCCCCc
Q 010105 334 EVFVEIVAVKNLPEDHK-DKGDLFVFFSKSQ-PDIFFNAKQKLTI--LSKSGMKQVASFQCE-ATGELLFELVSHSTSKI 408 (518)
Q Consensus 334 ev~l~iv~~~nl~~~~~-~~~~lfVr~~~~q-~d~~~~~~~~~~i--~s~s~~~~~~~l~CE-~t~~lv~elr~~~~~~l 408 (518)
.+.|.|++++||+.... ...+-||.++... .+......++-.+ +.++.|++.+.|... ....|.|++.-+..
T Consensus 21 ~L~V~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~~~l~~~V~d~d~--- 97 (153)
T 3b7y_A 21 IVRVRVIAGIGLAKKDILGASDPYVRVTLYDPMNGVLTSVQTKTIKKSLNPKWNEEILFRVHPQQHRLLFEVFDENR--- 97 (153)
T ss_dssp EEEEEEEEEESCC-------CCEEEEEEEEETTTEEEEEEECCCCSSCSSCCCCEEEEEEECTTTCEEEEEEEECCS---
T ss_pred EEEEEEEEeeCCCCCCCCCCCCcEEEEEEECCCCccceeeeCccccCCCCCCCCCEEEEEecCCCCEEEEEEEECCC---
Confidence 47788899999985421 2357899998652 2210110111111 456799999999887 45689999887643
Q ss_pred cCCCCcccceeEEeecccccCCCCCc--e-EEEEEeeccCCCCCCCCCceEEEEEeecC
Q 010105 409 PMTGASKTMGTASLSLQNFISPISKL--A-VEQWFDLVPRSGNVSSKPISLRIAVSFTI 464 (518)
Q Consensus 409 ~~~~~sk~lG~~s~~w~dll~~~~~L--s-~E~w~~l~~~~~~~~~~p~~lrva~S~Tp 464 (518)
+++...||.++|+++++....... . .++|+.|.+.++ .+...=.|+|.+++.|
T Consensus 98 --~~~d~~iG~~~i~l~~l~~~~~~~~~~~~~~w~~L~~~~~-~~~~~G~i~l~l~~~P 153 (153)
T 3b7y_A 98 --LTRDDFLGQVDVPLYPLPTENPRLERPYTFKDFVLHPRSH-KSRVKGYLRLKMTYLP 153 (153)
T ss_dssp --SSCCEEEEEEEEECCSCCBCCTTSCCCCCCEEEECBCSST-TCCCCSEEEEEEEECC
T ss_pred --CcCCCeeEEEEEEHHHcccCCCcccccccccccccccccC-CCCcceEEEEEEEEeC
Confidence 567889999999999998754321 2 259999988753 2233458888888776
No 2
>2dmh_A Myoferlin; beta-sandwich, FER-1-like protein 3, muscular dystrophy, cardiomyopathy, membrane fusion, dystrophin, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=97.67 E-value=0.00075 Score=59.04 Aligned_cols=121 Identities=17% Similarity=0.238 Sum_probs=82.5
Q ss_pred EEEEEEeecCCCCCcCCCCceEEEEeccCCCcccccccceeeeeccccceeEEEEee-----ccccEEEEEEecCCCCcc
Q 010105 335 VFVEIVAVKNLPEDHKDKGDLFVFFSKSQPDIFFNAKQKLTILSKSGMKQVASFQCE-----ATGELLFELVSHSTSKIP 409 (518)
Q Consensus 335 v~l~iv~~~nl~~~~~~~~~lfVr~~~~q~d~~~~~~~~~~i~s~s~~~~~~~l~CE-----~t~~lv~elr~~~~~~l~ 409 (518)
+.|.|++++||+.......+-||.++... .+ .+.+ ...=+.++.|++.+.|.+. ....|.|++..+..
T Consensus 9 L~v~v~~a~~L~~~~~g~~dpyv~v~~~~-~~-~kT~-v~~~t~nP~wne~f~f~v~~~~~~~~~~l~i~V~d~d~---- 81 (140)
T 2dmh_A 9 LRVIVESASNIPKTKFGKPDPIVSVIFKD-EK-KKTK-KVDNELNPVWNEILEFDLRGIPLDFSSSLGIIVKDFET---- 81 (140)
T ss_dssp EEEEEEEEESCCCCSSSCCCEEEEEECSS-CE-EECC-CCCSCSSCEEEEEEEEECSSCCCCTTCEEEEEEEETTC----
T ss_pred EEEEEEEeeCCCCCCCCCCCeEEEEEECC-Ee-EEee-eecCCCCCccCcEEEEEecccccCCCCEEEEEEEECCC----
Confidence 77888999999854323367899998552 11 1110 1111346789999999986 25788898887654
Q ss_pred CCCCcccceeEEeecccccCCCCCceEEEEEe---eccCCCCCCCCCceEEEEEeecCCcch
Q 010105 410 MTGASKTMGTASLSLQNFISPISKLAVEQWFD---LVPRSGNVSSKPISLRIAVSFTIPTLA 468 (518)
Q Consensus 410 ~~~~sk~lG~~s~~w~dll~~~~~Ls~E~w~~---l~~~~~~~~~~p~~lrva~S~TppvqA 468 (518)
+++..+||.+.|++++|... -..+.|+. |...++. ...=.|+|.+++.||...
T Consensus 82 -~~~~~~lG~~~i~l~~l~~~---~~~~~w~~l~~l~~~~~~--~~~G~l~l~~~~~p~~~~ 137 (140)
T 2dmh_A 82 -IGQNKLIGTATVALKDLTGD---QSRSLPYKLISLLNEKGQ--DTGATIDLVIGYDPPSGP 137 (140)
T ss_dssp -SSSCCCCEEEEEEGGGTCSS---SCEEEEEEEEEEECTTCC--EEEEEEEEEEEECCCBSS
T ss_pred -CCCCceEEEEEEEHHHhccC---CCceeEEeeeeccCCCCC--CCCCEEEEEEEEECCCCC
Confidence 45678999999999999753 36788988 5443321 122488889999886653
No 3
>1v27_A Regulating synaptic membrane exocytosis protein 2; RAB3-interacting molecule, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.7.1.2
Probab=97.48 E-value=0.0012 Score=57.50 Aligned_cols=107 Identities=15% Similarity=0.210 Sum_probs=72.4
Q ss_pred EEEEEEEeecCCCCCcC-CCCceEEEEeccCCCcccccccceee---eeccccceeEEEEee-----ccccEEEEEEecC
Q 010105 334 EVFVEIVAVKNLPEDHK-DKGDLFVFFSKSQPDIFFNAKQKLTI---LSKSGMKQVASFQCE-----ATGELLFELVSHS 404 (518)
Q Consensus 334 ev~l~iv~~~nl~~~~~-~~~~lfVr~~~~q~d~~~~~~~~~~i---~s~s~~~~~~~l~CE-----~t~~lv~elr~~~ 404 (518)
.+.|.|++++||+.... ...+-||+++... |..-....+..+ +.++.|++.+.|.+- .+..|.|++..+.
T Consensus 22 ~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~-~~~~~~~~kT~~~~~t~nP~wne~f~f~~~~~~~~~~~~l~i~V~d~d 100 (141)
T 1v27_A 22 QLIVTILGAKDLPSREDGRPRNPYVKIYFLP-DRSDKNKRRTKTVKKTLEPKWNQTFIYSPVHRREFRERMLEITLWDQA 100 (141)
T ss_dssp EEEEEEEEEESCCCCSSSCCCCEEEECCCSS-CCSSSSCCBCCCCSSCSSCCCCCCCEECSCCTTGGGTCEEEEEEEEBC
T ss_pred EEEEEEEEccCCCCcCCCCCCCCEEEEEEec-CCCCCcceeCccccCCCCCccccEEEEccCCHHHhcCCEEEEEEEECC
Confidence 37778899999985432 2357899998642 210000112222 456799999999852 3468899988765
Q ss_pred CCCccCCCCcccceeEEeecccccCCCCCceEEEEEeeccCCCC
Q 010105 405 TSKIPMTGASKTMGTASLSLQNFISPISKLAVEQWFDLVPRSGN 448 (518)
Q Consensus 405 ~~~l~~~~~sk~lG~~s~~w~dll~~~~~Ls~E~w~~l~~~~~~ 448 (518)
... .++..+||.+.|++.++... . .+.|++|.+.+..
T Consensus 101 ~~~---~~~~~~lG~~~i~l~~l~~~--~--~~~W~~L~~~~~g 137 (141)
T 1v27_A 101 RVR---EEESEFLGEILIELETALLD--D--EPHWYKLQTHDSG 137 (141)
T ss_dssp SSS---SCCBCCCEEEEEEGGGCCCS--S--EEEEEECBCCSSC
T ss_pred CCc---CCCCceEEEEEEEccccCCC--C--CCceEECcccccC
Confidence 521 11378999999999999864 3 8999999887554
No 4
>2b3r_A Phosphatidylinositol-4-phosphate 3-kinase C2 DOMA containing alpha polypeptide; C2 domain, lipid binding, PI3-kinase, transferase; 2.30A {Mus musculus}
Probab=97.45 E-value=0.0012 Score=58.09 Aligned_cols=103 Identities=17% Similarity=0.333 Sum_probs=70.6
Q ss_pred EEEEEEeecCCCCCcCCCCceEEEEeccCCCcccccccceee---eeccccceeEEEE-eec----cccEEEEEEecCCC
Q 010105 335 VFVEIVAVKNLPEDHKDKGDLFVFFSKSQPDIFFNAKQKLTI---LSKSGMKQVASFQ-CEA----TGELLFELVSHSTS 406 (518)
Q Consensus 335 v~l~iv~~~nl~~~~~~~~~lfVr~~~~q~d~~~~~~~~~~i---~s~s~~~~~~~l~-CE~----t~~lv~elr~~~~~ 406 (518)
+.|.|++++||+.......+-||+++.. +|..-..+.+..+ +.++.|++.+.|. +.. ...|.|++.-+..
T Consensus 22 L~V~V~~a~~L~~~~~g~~DPyv~v~l~-~~~~~~~~~kT~v~~~t~nP~wnE~f~f~~v~~~~l~~~~L~~~V~d~d~- 99 (134)
T 2b3r_A 22 LFIMVMHIKDLVTEDGADPNPYVKTYLL-PDTHKTSKRKTKISRKTRNPTFNEMLVYSGYSKETLRQRELQLSVLSAES- 99 (134)
T ss_dssp EEEEEEEEECCCCTTSCCCCEEEEEEEE-SCSSSCCCEECCCCCSCSSCEEEEEEEEESCCHHHHTTCEEEEEEEECCS-
T ss_pred EEEEEEEeeCCCCCCCCCCCeEEEEEEE-cCCCCCceecCCcCcCCCCCCCccEEEECCcCHHHhCcCEEEEEEEECCC-
Confidence 7788899999986433346789999865 2210000111222 4467899999998 652 4688888876643
Q ss_pred CccCCCCcccceeEEeecccccCCCCCceEEEEEeeccCC
Q 010105 407 KIPMTGASKTMGTASLSLQNFISPISKLAVEQWFDLVPRS 446 (518)
Q Consensus 407 ~l~~~~~sk~lG~~s~~w~dll~~~~~Ls~E~w~~l~~~~ 446 (518)
+++..+||.++|++.++... =..+.|++|.+.+
T Consensus 100 ----~~~~~~lG~~~i~l~~l~~~---~~~~~W~~L~~~~ 132 (134)
T 2b3r_A 100 ----LRENFFLGGITLPLKDFNLS---KETVKWYQLTAAT 132 (134)
T ss_dssp ----SSCCEEEEEEEEEGGGSCTT---SCEEEEEECBC--
T ss_pred ----CCCCcEEEEEEEEhhhccCC---CCcceeEECCCcc
Confidence 56678999999999999753 2578999998753
No 5
>2d8k_A Synaptotagmin VII; exocytosis, calcium binding, lysosome, C2 domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=97.40 E-value=0.0011 Score=58.22 Aligned_cols=106 Identities=16% Similarity=0.180 Sum_probs=73.2
Q ss_pred EEEEEEEeecCCCCCcC-CCCceEEEEeccCCCc-ccccccceeeeeccccceeEEEEee-----ccccEEEEEEecCCC
Q 010105 334 EVFVEIVAVKNLPEDHK-DKGDLFVFFSKSQPDI-FFNAKQKLTILSKSGMKQVASFQCE-----ATGELLFELVSHSTS 406 (518)
Q Consensus 334 ev~l~iv~~~nl~~~~~-~~~~lfVr~~~~q~d~-~~~~~~~~~i~s~s~~~~~~~l~CE-----~t~~lv~elr~~~~~ 406 (518)
.+.|.|++++||+.... ...+-||.++....+. ..+.+ ...=+.++.|++.+.|..- ....|.|++..+..
T Consensus 27 ~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~kT~-v~~~t~nP~wne~f~f~~~~~~~~~~~~l~i~V~d~d~- 104 (141)
T 2d8k_A 27 TLTVKIMKAQELPAKDFSGTSDPFVKIYLLPDKKHKLETK-VKRKNLNPHWNETFLFEGFPYEKVVQRILYLQVLDYDR- 104 (141)
T ss_dssp CEEEEEEEEESCCCCSSSSCCCEEEEEEEESCCSSEEECC-CCTTCSSCCCCEEEEECSCCHHHHTTSEEEEEEEECCS-
T ss_pred EEEEEEEEeECCCCCCCCCCCCcEEEEEEECCCCccEeCc-eEcCCCCCccccEEEECccCHHHcccCEEEEEEEECCC-
Confidence 37788899999986532 2357899998652111 11110 1111456799999888742 24678899887654
Q ss_pred CccCCCCcccceeEEeecccccCCCCCceEEEEEeeccCCCC
Q 010105 407 KIPMTGASKTMGTASLSLQNFISPISKLAVEQWFDLVPRSGN 448 (518)
Q Consensus 407 ~l~~~~~sk~lG~~s~~w~dll~~~~~Ls~E~w~~l~~~~~~ 448 (518)
+++..+||.+.|++.++... . ..+.|++|.+.+..
T Consensus 105 ----~~~~~~iG~~~i~l~~l~~~--~-~~~~W~~L~~~~~~ 139 (141)
T 2d8k_A 105 ----FSRNDPIGEVSIPLNKVDLT--Q-MQTFWKDLKPSGPS 139 (141)
T ss_dssp ----SSSCEEEEEEEEETTTSCTT--S-CEEEEECCEECCCC
T ss_pred ----CCCCcEEEEEEEEhhhhcCC--C-CccEEEECcCCCCC
Confidence 46678999999999999864 2 68999999987654
No 6
>3m7f_B E3 ubiquitin-protein ligase NEDD4; C2 domain, GRB10, SH2 domain, phosphoprotein, conjugation pathway, signaling protein-ligase complex; 2.00A {Mus musculus}
Probab=97.39 E-value=0.0017 Score=59.46 Aligned_cols=126 Identities=19% Similarity=0.220 Sum_probs=78.2
Q ss_pred EEEEEEEeecCCCCCcC-CCCceEEEEeccCC-Ccccccccceee--eeccccceeEEEEeec-cccEEEEEEecCCCCc
Q 010105 334 EVFVEIVAVKNLPEDHK-DKGDLFVFFSKSQP-DIFFNAKQKLTI--LSKSGMKQVASFQCEA-TGELLFELVSHSTSKI 408 (518)
Q Consensus 334 ev~l~iv~~~nl~~~~~-~~~~lfVr~~~~q~-d~~~~~~~~~~i--~s~s~~~~~~~l~CE~-t~~lv~elr~~~~~~l 408 (518)
.+.|.|++++||+.... ...+-||.++.... +......++-.+ +.++.|++.+.|...+ ...|.|++.-+..
T Consensus 9 ~L~V~v~~a~~L~~~d~~g~~DPyv~v~l~~~~~~~~~~~kT~v~~~t~nP~Wne~f~f~v~~~~~~L~~~V~d~d~--- 85 (176)
T 3m7f_B 9 VVRVKVIAGIGLAKKDILGASDPYVRVTLYDPMSGILTSVQTKTIKKSLNPKWNEEILFRVLPQRHRILFEVFDENR--- 85 (176)
T ss_dssp EEEEEEEEEESCC---CCCCCCEEEEEEEEETTTEEEEEEECCCCSSCSSCEEEEEEEEEECTTTCEEEEEEEECC----
T ss_pred EEEEEEEEeeCCCCcCCCCCcCcEEEEEEECCCCCcccceeCceECCCCCCcccceEEEEEcCCCCEEEEEEEECCC---
Confidence 36778899999985421 23678999986532 111000111111 4567899999999874 4588899886543
Q ss_pred cCCCCcccceeEEeecccccCCCCCce---EEEEEeeccCCCCCCCCCceEEEEEeecCC
Q 010105 409 PMTGASKTMGTASLSLQNFISPISKLA---VEQWFDLVPRSGNVSSKPISLRIAVSFTIP 465 (518)
Q Consensus 409 ~~~~~sk~lG~~s~~w~dll~~~~~Ls---~E~w~~l~~~~~~~~~~p~~lrva~S~Tpp 465 (518)
+++..+||.+.|++.++......+. ..+|+.|.+.++. +...=.|+|.++++|.
T Consensus 86 --~~~d~~lG~~~i~l~~l~~~~~~~~~~~~~~w~~L~~~~~~-~~~~G~l~l~l~~~p~ 142 (176)
T 3m7f_B 86 --LTRDDFLGQVDVPLYPLPTENPRMERPYTFKDFVLHPRSHK-SRVKGYLRLKMTYLPK 142 (176)
T ss_dssp -----CEEEEEEEEESCSCCBC------CCCCEEEECBCSSTT-CCCCSEEEEEEEECC-
T ss_pred --CCCCcEEEEEEEEHHHccccCCcccccccccEEEccccCCC-CccCEEEEEEEEEEeC
Confidence 4567899999999999987532221 1289999876542 2233588888998874
No 7
>3kwu_A MUNC13-1; calcium binding protein, phospholipid binding protein, metal binding protein; HET: GOL; 1.37A {Rattus norvegicus} SCOP: b.7.1.0 PDB: 3kwt_A*
Probab=97.33 E-value=0.0055 Score=54.04 Aligned_cols=122 Identities=11% Similarity=0.253 Sum_probs=79.4
Q ss_pred EEEEEEEEeecCCCCCc-CCCCceEEEEeccCCCcccccccceeeeeccccceeEEEEee-ccccEEEEEEecCCCCc--
Q 010105 333 VEVFVEIVAVKNLPEDH-KDKGDLFVFFSKSQPDIFFNAKQKLTILSKSGMKQVASFQCE-ATGELLFELVSHSTSKI-- 408 (518)
Q Consensus 333 ~ev~l~iv~~~nl~~~~-~~~~~lfVr~~~~q~d~~~~~~~~~~i~s~s~~~~~~~l~CE-~t~~lv~elr~~~~~~l-- 408 (518)
-.+.|.|++++||+... ....+-||.++.. +.....+ ...=+.++.|++.+.|.+. +...|.|++.-+...-.
T Consensus 17 ~~L~V~v~~a~~L~~~d~~g~~dpyv~v~~~--~~~~kT~-~~~~t~nP~Wne~f~f~v~~~~~~l~~~v~d~d~~~~~~ 93 (148)
T 3kwu_A 17 AKISITVVCAQGLQAKDKTGSSDPYVTVQVG--KTKKRTK-TIYGNLNPVWEENFHFECHNSSDRIKVRVLDEDDDIKSR 93 (148)
T ss_dssp EEEEEEEEEEESCCCCSTTSCCCEEEEEEET--TEEEECC-CCCSCSSCEEEEEEEEEECSTTCEEEEEEEECCCSHHHH
T ss_pred cEEEEEEEeeeCCCCCCCCCCcCeEEEEEEC--CEEEECC-ccCCCCCCCcccEEEEEecCCCCEEEEEEEECCCCcccc
Confidence 45888899999998542 2346789998862 2111110 1111356789999999997 56789999887665300
Q ss_pred --c--CCCCcccceeEEeecccccCCCCCceEEEEEeeccCCCCCCCCCceEEEEEeec
Q 010105 409 --P--MTGASKTMGTASLSLQNFISPISKLAVEQWFDLVPRSGNVSSKPISLRIAVSFT 463 (518)
Q Consensus 409 --~--~~~~sk~lG~~s~~w~dll~~~~~Ls~E~w~~l~~~~~~~~~~p~~lrva~S~T 463 (518)
. ..++...||.+.|+++++.. ..+.|++|.+.++.. ...=.|+|.++++
T Consensus 94 ~~~~~~~~~~~~lG~~~i~l~~l~~-----~~~~w~~L~~~~~~~-~~~G~i~l~l~~e 146 (148)
T 3kwu_A 94 VKQRFKRESDDFLGQTIIEVRTLSG-----EMDVWYNLDKRTDKS-AVSGAIRLHISVE 146 (148)
T ss_dssp HHTTTSSCSSEEEEEEEEEGGGCCS-----EEEEEEECBCSSTTC-CCCCEEEEEEEEE
T ss_pred ccccccCCCCccEEEEEEEHHHCcC-----CCCEEEEcccCCCCC-CCceEEEEEEEEE
Confidence 0 12678899999999999832 468999998754322 1223566666543
No 8
>3fbk_A RGS3, RGP3, regulator of G-protein signaling 3; all beta-sheet fold, structural genomics, PSI-2, protein structure initiative; 2.00A {Homo sapiens} SCOP: b.7.1.0
Probab=97.29 E-value=0.0011 Score=59.31 Aligned_cols=107 Identities=17% Similarity=0.285 Sum_probs=72.0
Q ss_pred EEEEEEeecCCCCCcCCCCceEEEEeccCCCcccccccceee---eeccccceeEEEEee---ccccEEEEEEecCCCCc
Q 010105 335 VFVEIVAVKNLPEDHKDKGDLFVFFSKSQPDIFFNAKQKLTI---LSKSGMKQVASFQCE---ATGELLFELVSHSTSKI 408 (518)
Q Consensus 335 v~l~iv~~~nl~~~~~~~~~lfVr~~~~q~d~~~~~~~~~~i---~s~s~~~~~~~l~CE---~t~~lv~elr~~~~~~l 408 (518)
+.|.|++++||+.......+-||+++......... +.+..+ +.++.|++.+.|... ....|.|++......
T Consensus 29 L~V~v~~a~~L~~~d~g~~Dpyv~v~l~~~~~~~~-~~kT~v~~~t~nP~wne~f~f~v~~~~~~~~L~i~V~d~d~~-- 105 (153)
T 3fbk_A 29 LLLHIIEGKGLISKQPGTCDPYVKISLIPEDSRLR-HQKTQTVPDCRDPAFHEHFFFPVQEEDDQKRLLVTVWNRASQ-- 105 (153)
T ss_dssp EEEEEEEEESCCCCSSSCCCEEEEEEEESCSCCTT-CEECCCCTTCSSCEEEEEEEEECCGGGTTSEEEEEEEECCSS--
T ss_pred EEEEEEEeeCCCCCCCCCCCEEEEEEEEcCCCCcc-EEeccccCCCCCCccccEEEEecccHHhCCEEEEEEEeCCCC--
Confidence 67788999999854323467899998653211111 112222 446789999999873 335688888765431
Q ss_pred cCCCCcccceeEEeecccccCCCCCceEEEEEeeccCCCC
Q 010105 409 PMTGASKTMGTASLSLQNFISPISKLAVEQWFDLVPRSGN 448 (518)
Q Consensus 409 ~~~~~sk~lG~~s~~w~dll~~~~~Ls~E~w~~l~~~~~~ 448 (518)
.++...||.++|++.++..+ .-.++.|+.|.+....
T Consensus 106 --~~~d~~lG~~~i~l~~l~~~--~~~~~~W~~L~~~~~g 141 (153)
T 3fbk_A 106 --SRQSGLIGCMSFGVKSLLTP--DKEISGWYYLLGEHLG 141 (153)
T ss_dssp --GGGCEEEEEEEEEHHHHTC----CCEEEEEECBCTTGG
T ss_pred --CCCCcEEEEEEEEHHHhcCC--CCccccEEECCChhhc
Confidence 23478999999999999863 4578899999887543
No 9
>3n5a_A Synaptotagmin-7; calcium/phospholipid binding protein, protein transport; 1.44A {Mus musculus}
Probab=97.27 E-value=0.0013 Score=57.02 Aligned_cols=104 Identities=17% Similarity=0.271 Sum_probs=69.9
Q ss_pred EEEEEEeecCCCCCcC-CCCceEEEEeccCCCcccccccceee--eeccccceeEEEEeecc----ccEEEEEEecCCCC
Q 010105 335 VFVEIVAVKNLPEDHK-DKGDLFVFFSKSQPDIFFNAKQKLTI--LSKSGMKQVASFQCEAT----GELLFELVSHSTSK 407 (518)
Q Consensus 335 v~l~iv~~~nl~~~~~-~~~~lfVr~~~~q~d~~~~~~~~~~i--~s~s~~~~~~~l~CE~t----~~lv~elr~~~~~~ 407 (518)
+.|.|++++||+.... ...+-||.++....+......++-.+ +.++.|++.+.|.+... ..|.|++..+..
T Consensus 18 L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~~~kT~~~~~t~nP~wne~f~f~v~~~~l~~~~l~~~V~d~~~-- 95 (138)
T 3n5a_A 18 IIVNIIKARNLKAMDIGGTSDPYVKVWLMYKDKRVEKKKTVTKKRNLNPIFNESFAFDIPTEKLRETTIIITVMDKDK-- 95 (138)
T ss_dssp EEEEEEEEESCCCCBTTTBCCEEEEEEEEETTEEEEEEECCCCSSCSSCEEEEEEEEECCGGGGGGEEEEEEEEECCS--
T ss_pred EEEEEEEeeCCCCcCCCCCcCeEEEEEEEeCCCccceEeCccccCCCCCcCcceEEEECChhhcCceEEEEEEEECCC--
Confidence 7788999999985422 23678999986532211111111111 35678999999997642 478888877554
Q ss_pred ccCCCCcccceeEEeecc----------cccCCCCCceEEEEEeecc
Q 010105 408 IPMTGASKTMGTASLSLQ----------NFISPISKLAVEQWFDLVP 444 (518)
Q Consensus 408 l~~~~~sk~lG~~s~~w~----------dll~~~~~Ls~E~w~~l~~ 444 (518)
+++...||.+.|+++ +|+.. |.-.+++|..|.|
T Consensus 96 ---~~~~~~lG~~~i~l~~~~~~~~~W~~l~~~-~~~~~~~Wh~L~p 138 (138)
T 3n5a_A 96 ---LSRNDVIGKIYLSWKSGPGEVKHWKDMIAR-PRQPVAQWHQLKA 138 (138)
T ss_dssp ---SSCCEEEEEEEESSSSCHHHHHHHHHHHHS-TTCCEEEEEECBC
T ss_pred ---CCCCcEEEEEEEccccCChHHHHHHHHHhC-CCCeEEEEeecCC
Confidence 457789999999987 55554 5677888888764
No 10
>3fdw_A Synaptotagmin-like protein 4; structural genomics, phospholipid binding, alternative splicing, cell membrane, cytoplasmic vesicle, membrane; 2.20A {Homo sapiens}
Probab=97.25 E-value=0.00074 Score=59.97 Aligned_cols=108 Identities=14% Similarity=0.182 Sum_probs=70.4
Q ss_pred EEEEEEeecCCCCCc--CCCCceEEEEeccCCCcccccccceee---eeccccceeEEEEeec----cccEEEEEEecCC
Q 010105 335 VFVEIVAVKNLPEDH--KDKGDLFVFFSKSQPDIFFNAKQKLTI---LSKSGMKQVASFQCEA----TGELLFELVSHST 405 (518)
Q Consensus 335 v~l~iv~~~nl~~~~--~~~~~lfVr~~~~q~d~~~~~~~~~~i---~s~s~~~~~~~l~CE~----t~~lv~elr~~~~ 405 (518)
+.|.|++++||+... ....+-||+++......... +.+..+ +.++.|++.+.|.... ...|.|++.-+..
T Consensus 25 L~V~v~~a~~L~~~d~~~~~~dpyv~v~l~~~~~~~~-~~kT~v~~~t~nP~wne~f~f~v~~~~~~~~~L~~~V~d~d~ 103 (148)
T 3fdw_A 25 LVVHVKECHQLAYADEAKKRSNPYVKTYLLPDKSRQG-KRKTSIKRDTVNPLYDETLRYEIPESLLAQRTLQFSVWHHGR 103 (148)
T ss_dssp EEEEEEEEESCCCSBTTTTBCCEEEEEEEETCCSGGG-EEECCCCSSCSSCEEEEEEEEECCSTTGGGCEEEEEEEEECG
T ss_pred EEEEEEEecCCCCcccCCCCCCeEEEEEEEcCCcccC-ccccccCCCCCCCcEeeEEEEEeChhHhCceEEEEEEEECCC
Confidence 677889999998432 23468899998652221111 111222 3467899999998763 3358888876543
Q ss_pred CCccCCCCcccceeEEeecccccCCCCCceEEEEEeeccCCCCCCC
Q 010105 406 SKIPMTGASKTMGTASLSLQNFISPISKLAVEQWFDLVPRSGNVSS 451 (518)
Q Consensus 406 ~~l~~~~~sk~lG~~s~~w~dll~~~~~Ls~E~w~~l~~~~~~~~~ 451 (518)
+++..+||.++|++.++.... ..+.|++|.++++..++
T Consensus 104 -----~~~~~~iG~~~i~l~~l~~~~---~~~~W~~L~~~~~~~~~ 141 (148)
T 3fdw_A 104 -----FGRNTFLGEAEIQMDSWKLDK---KLDHCLPLHGKISAESE 141 (148)
T ss_dssp -----GGCEEEEEEEEEEHHHHHHHC---CSEEEEECBCC------
T ss_pred -----CcCCcEEEEEEEEcccccccC---CccceEECcCccccccc
Confidence 567889999999999997532 56799999998766543
No 11
>3f04_A Synaptotagmin-1; C2A, calcium, cell junction, cytoplasmic vesicle, glycoprotein, lipoprotein, membrane, metal- binding, palmitate, phosphoprotein; 1.35A {Homo sapiens} SCOP: b.7.1.2 PDB: 3f01_A 3f05_A 3f00_A 1byn_A 2k45_A 2k4a_A 2k8m_A 2ki6_A*
Probab=97.22 E-value=0.0019 Score=56.70 Aligned_cols=101 Identities=14% Similarity=0.180 Sum_probs=69.9
Q ss_pred EEEEEEeecCCCCCc-CCCCceEEEEeccCCCc-ccccccceeeeeccccceeEEEEeec----cccEEEEEEecCCCCc
Q 010105 335 VFVEIVAVKNLPEDH-KDKGDLFVFFSKSQPDI-FFNAKQKLTILSKSGMKQVASFQCEA----TGELLFELVSHSTSKI 408 (518)
Q Consensus 335 v~l~iv~~~nl~~~~-~~~~~lfVr~~~~q~d~-~~~~~~~~~i~s~s~~~~~~~l~CE~----t~~lv~elr~~~~~~l 408 (518)
+.|.|++++||+... ....+-||+++....+. ..+. ....=+.++.|++.+.|.... ...|.|++..+..
T Consensus 36 L~v~v~~a~~L~~~d~~g~~dpyv~v~l~~~~~~~~kT-~v~~~t~nP~wne~f~f~v~~~~l~~~~L~i~V~d~d~--- 111 (143)
T 3f04_A 36 LLVGIIQAAELPALDMGGTSDPYVKVFLLPDKKKKFET-KVHRKTLNPVFNEQFTFKVPYSELGGKTLVMAVYDFDR--- 111 (143)
T ss_dssp EEEEEEEEECCCCBGGGBCCCEEEEEEEESCCSCCEEC-CCCCSCSSCEEEEEEEECCCHHHHTTCEEEEEEEECCS---
T ss_pred EEEEEEEecCCCCCCCCCCcCcEEEEEEECCCCccEEC-ccCcCCCCCcCcCeEEEeecHhhcCCCEEEEEEEeCCC---
Confidence 677889999998542 12467899998642221 1111 111114567899999998763 2678888876544
Q ss_pred cCCCCcccceeEEeecccccCCCCCceEEEEEeecc
Q 010105 409 PMTGASKTMGTASLSLQNFISPISKLAVEQWFDLVP 444 (518)
Q Consensus 409 ~~~~~sk~lG~~s~~w~dll~~~~~Ls~E~w~~l~~ 444 (518)
+++..+||.+.|++.++.. .-..+.|++|.|
T Consensus 112 --~~~~~~iG~~~i~l~~l~~---~~~~~~W~~L~~ 142 (143)
T 3f04_A 112 --FSKHDIIGEFKVPMNTVDF---GHVTEEWRDLQS 142 (143)
T ss_dssp --SSCCEEEEEEEEEGGGCCT---TSCEEEEEECBC
T ss_pred --CCCCceEEEEEEEHHHccC---CCCcceEEECcC
Confidence 5677899999999999864 346789999876
No 12
>1a25_A CALB, protein kinase C (beta); calcium++/phospholipid binding protein, calcium-binding protein; HET: PSE; 2.70A {Rattus norvegicus} SCOP: b.7.1.2
Probab=97.22 E-value=0.0022 Score=56.93 Aligned_cols=102 Identities=20% Similarity=0.256 Sum_probs=71.4
Q ss_pred EEEEEEeecCCCCCcC-CCCceEEEEeccCCCcccccccceee--eeccccceeEEEEeec---cccEEEEEEecCCCCc
Q 010105 335 VFVEIVAVKNLPEDHK-DKGDLFVFFSKSQPDIFFNAKQKLTI--LSKSGMKQVASFQCEA---TGELLFELVSHSTSKI 408 (518)
Q Consensus 335 v~l~iv~~~nl~~~~~-~~~~lfVr~~~~q~d~~~~~~~~~~i--~s~s~~~~~~~l~CE~---t~~lv~elr~~~~~~l 408 (518)
+.|.|++++||+.... ...+-||+++...........++-.+ +.++.|++.+.|.+.. ...|.|+|..+..
T Consensus 33 L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~~~~~L~i~V~d~d~--- 109 (149)
T 1a25_A 33 LIVVVRDAKNLVPMDPNGLSDPYVKLKLIPDPKSESKQKTKTIKCSLNPEWNETFRFQLKESDKDRRLSVEIWDWDL--- 109 (149)
T ss_dssp EEEEEEEEESCCCCSTTSCCCEEEEEEEESCTTCSSCEECCCCSSCSSCEEEEEEEEECCSGGGGCEEEEEEEECCS---
T ss_pred EEEEEEEeeCCCCCCCCCCcCeEEEEEEECCCCCcceEecceeCCCCCCcCCcEEEEEeccccCCCEEEEEEEECCC---
Confidence 7888999999985432 33588999986531111110111111 4567999999999873 3578888887644
Q ss_pred cCCCCcccceeEEeecccccCCCCCceEEEEEeeccC
Q 010105 409 PMTGASKTMGTASLSLQNFISPISKLAVEQWFDLVPR 445 (518)
Q Consensus 409 ~~~~~sk~lG~~s~~w~dll~~~~~Ls~E~w~~l~~~ 445 (518)
+++..+||.+.|++.+|... ..+.|++|.+.
T Consensus 110 --~~~~~~iG~~~i~l~~l~~~----~~~~W~~L~~~ 140 (149)
T 1a25_A 110 --TSRNDFMGSLSFGISELQKA----GVDGWFKLLSQ 140 (149)
T ss_dssp --SSCCEEEEEEEEEHHHHTTC----CEEEEEECBCH
T ss_pred --CCCCCEEEEEEEEHHHhCcC----ccCCeEEccCC
Confidence 46778999999999999864 38999999775
No 13
>1w15_A Synaptotagmin IV; metal binding protein, endocytosis/exocytosis neurotransmitter release, transmembrane; 1.93A {Rattus norvegicus} SCOP: b.7.1.2 PDB: 1w16_A
Probab=97.19 E-value=0.0014 Score=58.35 Aligned_cols=105 Identities=12% Similarity=0.223 Sum_probs=69.9
Q ss_pred EEEEEEEeecCCCCCc-CCCCceEEEEeccCCCcccccccceee---eeccccceeEEEEeecc----ccEEEEEEecCC
Q 010105 334 EVFVEIVAVKNLPEDH-KDKGDLFVFFSKSQPDIFFNAKQKLTI---LSKSGMKQVASFQCEAT----GELLFELVSHST 405 (518)
Q Consensus 334 ev~l~iv~~~nl~~~~-~~~~~lfVr~~~~q~d~~~~~~~~~~i---~s~s~~~~~~~l~CE~t----~~lv~elr~~~~ 405 (518)
.+.|.|++++||+... ....+-||.++......... +.+..+ +.++.|++.+.|.+... ..|.|+|..+..
T Consensus 31 ~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~-~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~l~v~V~d~d~ 109 (153)
T 1w15_A 31 TLTVVVLKARHLPKSDVSGLSDPYVKVNLYHAKKRIS-KKKTHVKKCTPNAVFNELFVFDIPCESLEEISVEFLVLDSER 109 (153)
T ss_dssp EEEEEEEEEESCC------CCCEEEEEEEEETTEEEE-EEECCCCCSCSSEEEEEEEEEECCSSSSTTEEEEEEEEECCT
T ss_pred EEEEEEEEeECCCCcCCCCCCCeEEEEEEEeCCeEec-eEecCcccCCCCCeecceEEEECCHHHhCceEEEEEEEeCCC
Confidence 3777889999998543 12357899998653221110 111111 44679999999988743 568888876543
Q ss_pred CCccCCCCcccceeEEeeccc----------ccCCCCCceEEEEEeeccC
Q 010105 406 SKIPMTGASKTMGTASLSLQN----------FISPISKLAVEQWFDLVPR 445 (518)
Q Consensus 406 ~~l~~~~~sk~lG~~s~~w~d----------ll~~~~~Ls~E~w~~l~~~ 445 (518)
+++..+||.++|+..+ |+.. |...+++|..|.++
T Consensus 110 -----~~~~~~lG~~~i~l~~~~~~~~~W~~l~~~-p~~~~~~Wh~L~~~ 153 (153)
T 1w15_A 110 -----GSRNEVIGRLVLGATAEGSGGGHWKEICDF-PRRQIAKWHMLCDG 153 (153)
T ss_dssp -----TSCCEEEEEEEESTTCCSHHHHHHHHHHHS-TTCCEEEEEECBCC
T ss_pred -----CCCCcEEEEEEECCCCCchHHHHHHHHHhC-CCCeeeeccccccC
Confidence 5677899999998766 7764 68889999988763
No 14
>2cm5_A Rabphilin-3A; protein transport, zinc-finger, Ca2+ binding, metal-binding, synaptic exocytosis, C2A-C2B linker fragment, C2B, zinc, synapse; 1.28A {Rattus norvegicus} SCOP: b.7.1.2 PDB: 2cm6_A 3rpb_A
Probab=97.18 E-value=0.0018 Score=58.63 Aligned_cols=106 Identities=14% Similarity=0.156 Sum_probs=70.7
Q ss_pred EEEEEEeecCCCCCc-CCCCceEEEEeccCCCcccccccceee---eeccccceeEEEEeec----cccEEEEEEecCCC
Q 010105 335 VFVEIVAVKNLPEDH-KDKGDLFVFFSKSQPDIFFNAKQKLTI---LSKSGMKQVASFQCEA----TGELLFELVSHSTS 406 (518)
Q Consensus 335 v~l~iv~~~nl~~~~-~~~~~lfVr~~~~q~d~~~~~~~~~~i---~s~s~~~~~~~l~CE~----t~~lv~elr~~~~~ 406 (518)
+.|.|++++||+... ....+-||.++....+.... ..+..+ +.++.|++.+.|.+.. ...|.|+|..+..
T Consensus 39 L~V~v~~a~~L~~~d~~g~~DPyv~v~l~~~~~~~~-~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~L~i~V~d~d~- 116 (166)
T 2cm5_A 39 LIVGIIRCVHLAAMDANGYSDPFVKLWLKPDMGKKA-KHKTQIKKKTLNPEFNEEFFYDIKHSDLAKKSLDISVWDYDI- 116 (166)
T ss_dssp EEEEEEEEESCCCCSTTSCCCEEEEEEEETC---CC-EEECCCCCSCSSCEEEEEEEEECCGGGGGGCEEEEEEEECCS-
T ss_pred EEEEEEEeECCCCccCCCCCCcEEEEEEECCCCccc-eEeCCcccCCCCCcccceEEEEcchHhcCCCEEEEEEEECCC-
Confidence 677889999998542 12357899998653211111 111222 4467999999999864 4588888887654
Q ss_pred CccCCCCcccceeEEeeccc----------ccCCCCCceEEEEEeeccCCC
Q 010105 407 KIPMTGASKTMGTASLSLQN----------FISPISKLAVEQWFDLVPRSG 447 (518)
Q Consensus 407 ~l~~~~~sk~lG~~s~~w~d----------ll~~~~~Ls~E~w~~l~~~~~ 447 (518)
+++..+||.++|+..+ |+.. +.-.++.|..|.+.+.
T Consensus 117 ----~~~~~~iG~~~i~l~~~~~~~~~W~~l~~~-~~~~~~~Wh~L~~~~~ 162 (166)
T 2cm5_A 117 ----GKSNDYIGGCQLGISAKGERLKHWYECLKN-KDKKIERWHQLQNENH 162 (166)
T ss_dssp ----SSCCEEEEEEEEETTCCHHHHHHHHHHHHC-TTCCEEEEEECBC---
T ss_pred ----CCCCcEEEeEEEecccCCchhHHHHHHHhC-CCCcceEeeECCCccc
Confidence 4667899999999766 4554 5778889999877543
No 15
>1wfj_A Putative elicitor-responsive gene; C2 domain, riken structural genomics/proteomics initiative, RSGI, structural genomics, plant protein; NMR {Arabidopsis thaliana} SCOP: b.7.1.2
Probab=97.13 E-value=0.0016 Score=56.59 Aligned_cols=117 Identities=15% Similarity=0.186 Sum_probs=80.3
Q ss_pred EEEEEEEeecCCCCCcC-CCCceEEEEeccCCCccccccccee--eeeccccceeEEEEee-ccccEEEEEEecCCCCcc
Q 010105 334 EVFVEIVAVKNLPEDHK-DKGDLFVFFSKSQPDIFFNAKQKLT--ILSKSGMKQVASFQCE-ATGELLFELVSHSTSKIP 409 (518)
Q Consensus 334 ev~l~iv~~~nl~~~~~-~~~~lfVr~~~~q~d~~~~~~~~~~--i~s~s~~~~~~~l~CE-~t~~lv~elr~~~~~~l~ 409 (518)
.+.|.|++++||+.... ...+-||.++... ++ ++ .+.. =+.++.|++.+.|... ....|.|++..+..
T Consensus 11 ~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~-~~-~k--T~~~~~~~~nP~Wne~f~f~v~~~~~~l~~~V~d~~~---- 82 (136)
T 1wfj_A 11 TLEVVLVSAKGLEDADFLNNMDPYVQLTCRT-QD-QK--SNVAEGMGTTPEWNETFIFTVSEGTTELKAKIFDKDV---- 82 (136)
T ss_dssp EEEEEEEEEEECSSCCSSCSSCCCEEEESSS-CE-EE--CCCCTTCCSSCEEEEEEEEEEESSCCEEEEEECCSSS----
T ss_pred EEEEEEEeccCCCCcccCCCcCceEEEEECC-cc-ce--eEeccCCCCCCccCcEEEEEECCCCCEEEEEEEECCC----
Confidence 36778899999986432 2357899988542 22 11 1111 1346799999999988 46788888876543
Q ss_pred CCCCcccceeEEeecccccCCCCCceEEEEEeeccCCCCCCCCCceEEEEEeecCC
Q 010105 410 MTGASKTMGTASLSLQNFISPISKLAVEQWFDLVPRSGNVSSKPISLRIAVSFTIP 465 (518)
Q Consensus 410 ~~~~sk~lG~~s~~w~dll~~~~~Ls~E~w~~l~~~~~~~~~~p~~lrva~S~Tpp 465 (518)
+++.++||.+.|++++++.. .-..+.|++|.+. +...=.|++.+++.|-
T Consensus 83 -~~~d~~lG~~~i~l~~l~~~--~~~~~~w~~L~~~----~~~~G~i~l~l~~~p~ 131 (136)
T 1wfj_A 83 -GTEDDAVGEATIPLEPVFVE--GSIPPTAYNVVKD----EEYKGEIWVALSFKPS 131 (136)
T ss_dssp -CTTTCCSEEEEEESHHHHHH--SEEEEEEEEEEET----TEEEEEEEEEEEEEEC
T ss_pred -CCCCceEEEEEEEHHHhccC--CCCCcEEEEeecC----CccCEEEEEEEEEEeC
Confidence 56788999999999999753 3457899999822 1222367777777664
No 16
>2ep6_A MCTP2 protein; beta sandwich, Ca2+ binding, membrane binding, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.7.1.1
Probab=97.12 E-value=0.0054 Score=53.22 Aligned_cols=114 Identities=11% Similarity=0.141 Sum_probs=77.4
Q ss_pred EEEEEEeecCCCCCcC-CCCceEEEEeccCCCcccccccceeeeeccccceeEEEEee-ccccEEEEEEecCCCCccCCC
Q 010105 335 VFVEIVAVKNLPEDHK-DKGDLFVFFSKSQPDIFFNAKQKLTILSKSGMKQVASFQCE-ATGELLFELVSHSTSKIPMTG 412 (518)
Q Consensus 335 v~l~iv~~~nl~~~~~-~~~~lfVr~~~~q~d~~~~~~~~~~i~s~s~~~~~~~l~CE-~t~~lv~elr~~~~~~l~~~~ 412 (518)
+.|.|++++||+.... ...+-||.++.. +++ .+.+ ...=+.++.|++.+.|... +...|.|++..+.. ++
T Consensus 15 L~v~v~~a~~L~~~d~~g~~dpyv~v~~~-~~~-~kT~-~~~~t~nP~wne~f~f~~~~~~~~l~i~V~d~d~-----~~ 86 (133)
T 2ep6_A 15 LQVKVLKAADLLAADFSGKSDPFCLLELG-NDR-LQTH-TVYKNLNPEWNKVFTFPIKDIHDVLEVTVFDEDG-----DK 86 (133)
T ss_dssp EEEEEEEEESCCCSSSSSCCCEEEEEEET-TEE-EECC-CCSSCSSCCCCEEEEEEESCTTCEEEEEEEEEET-----TE
T ss_pred EEEEEEeeECCCCCCCCCCcCeEEEEEEC-CEE-EEee-eecCCCCCccccEEEEEecCCCCEEEEEEEECCC-----CC
Confidence 6677899999985431 235789998854 222 1111 1111356799999999987 56789999987655 45
Q ss_pred CcccceeEEeecccccCCCCCceEEEEEeeccCCCCCCCCCceEEEEEee
Q 010105 413 ASKTMGTASLSLQNFISPISKLAVEQWFDLVPRSGNVSSKPISLRIAVSF 462 (518)
Q Consensus 413 ~sk~lG~~s~~w~dll~~~~~Ls~E~w~~l~~~~~~~~~~p~~lrva~S~ 462 (518)
+.+.||.+.|+..++... .+.|++|...++. +...=.|+|.+++
T Consensus 87 ~~~~lG~~~i~l~~l~~~-----~~~w~~L~~~~~~-~~~~G~i~l~i~~ 130 (133)
T 2ep6_A 87 PPDFLGKVAIPLLSIRDG-----QPNCYVLKNKDLE-QAFKGVIYLEMDL 130 (133)
T ss_dssp EEEECCBCEEEGGGCCSS-----CCEECCCBCSCTT-SCCSSEEEEEEEE
T ss_pred CCCeeEEEEEEHHHccCC-----CceEEEeecCCCC-CccceEEEEEEEE
Confidence 678999999999999753 2589999876542 2223366666664
No 17
>1rlw_A Phospholipase A2, CALB domain; hydrolase, C2 domain; 2.40A {Homo sapiens} SCOP: b.7.1.1
Probab=97.12 E-value=0.0049 Score=52.65 Aligned_cols=113 Identities=14% Similarity=0.126 Sum_probs=75.7
Q ss_pred EEEEEEeecCCCCC----cCCCCceEEEEeccCC-CcccccccceeeeeccccceeEEEEee--ccccEEEEEEecCCCC
Q 010105 335 VFVEIVAVKNLPED----HKDKGDLFVFFSKSQP-DIFFNAKQKLTILSKSGMKQVASFQCE--ATGELLFELVSHSTSK 407 (518)
Q Consensus 335 v~l~iv~~~nl~~~----~~~~~~lfVr~~~~q~-d~~~~~~~~~~i~s~s~~~~~~~l~CE--~t~~lv~elr~~~~~~ 407 (518)
+.|.|++++||+.. .....+-||.++.... ....+.+ ...=+.++.|++.+.|... ....|.|++..+..
T Consensus 5 L~v~v~~a~~L~~~~~~d~~g~~dpyv~v~~~~~~~~~~kT~-v~~~t~nP~wne~f~f~v~~~~~~~l~i~V~d~d~-- 81 (126)
T 1rlw_A 5 FTVVVLRATKVTKGAFGDMLDTPDPYVELFISTTPDSRKRTR-HFNNDINPVWNETFEFILDPNQENVLEITLMDANY-- 81 (126)
T ss_dssp EEEEEEEEESCCSCHHHHHHCCCCEEEEEECTTSTTCCEECC-CCTTCSSCEEEEEEEEEECTTSCCEEEEEEEECCS--
T ss_pred EEEEEEeeeCCCCCCccccCCCCCCEEEEEEccCCCceEEcc-ccCCCCCCcccceEEEEecCCCCCEEEEEEEECCC--
Confidence 67889999999862 1123678999996532 1111110 0111346799999999985 34678888877653
Q ss_pred ccCCCCcccceeEEeecccccCCCCCceEEEEEeeccCCCCCCCCCceEEEEEeec
Q 010105 408 IPMTGASKTMGTASLSLQNFISPISKLAVEQWFDLVPRSGNVSSKPISLRIAVSFT 463 (518)
Q Consensus 408 l~~~~~sk~lG~~s~~w~dll~~~~~Ls~E~w~~l~~~~~~~~~~p~~lrva~S~T 463 (518)
++ ..+||.+.|++++|.. .-..+.|+.|.+. .-..+++.+..+
T Consensus 82 ---~~-~~~iG~~~i~l~~l~~---~~~~~~~~~L~~~------~~g~i~~~le~~ 124 (126)
T 1rlw_A 82 ---VM-DETLGTATFTVSSMKV---GEKKEVPFIFNQV------TEMVLEMSLEVA 124 (126)
T ss_dssp ---SC-CEEEEEEEEEGGGSCT---TCEEEEEEEETTT------EEEEEEEEEECC
T ss_pred ---CC-CceeEEEEEEHHHccC---CCcEEEEEEcCCC------ceEEEEEEEEeC
Confidence 33 7799999999999974 5688999999863 124555555443
No 18
>1tjx_A Similar to synaptotagmini/P65; C2B domain, calcium binding, endocytosis-EX complex; HET: GOL; 1.04A {Rattus norvegicus} SCOP: b.7.1.2 PDB: 1tjm_A* 1uov_A 1uow_A 1k5w_A 2lha_A*
Probab=97.06 E-value=0.0029 Score=56.70 Aligned_cols=105 Identities=18% Similarity=0.258 Sum_probs=72.1
Q ss_pred EEEEEEEeecCCCCCcC-CCCceEEEEeccCCCcccccccceee---eeccccceeEEEEeec----cccEEEEEEecCC
Q 010105 334 EVFVEIVAVKNLPEDHK-DKGDLFVFFSKSQPDIFFNAKQKLTI---LSKSGMKQVASFQCEA----TGELLFELVSHST 405 (518)
Q Consensus 334 ev~l~iv~~~nl~~~~~-~~~~lfVr~~~~q~d~~~~~~~~~~i---~s~s~~~~~~~l~CE~----t~~lv~elr~~~~ 405 (518)
.+.|.|++++||+.... ...+-||.++....+...... +..+ +.++.|++.+.|.+.. ...|.|+|..+..
T Consensus 26 ~L~V~v~~a~~L~~~d~~g~~dpyv~v~l~~~~~~~~~~-kT~v~~~t~nP~wne~f~f~v~~~~l~~~~l~i~V~d~d~ 104 (159)
T 1tjx_A 26 KLTVVILEAKNLKKMDVGGLSDPYVKIHLMQNGKRLKKK-KTTIKKNTLNPYYNESFSFEVPFEQIQKVQVVVTVLDYDK 104 (159)
T ss_dssp EEEEEEEEEESCCCCSTTSCCCEEEEEEEEETTEEEEEE-ECCCCCSCSSCEEEEEEEEECCGGGGGGCEEEEEEEECCS
T ss_pred EEEEEEEEeeCCCCccCCCCCCeEEEEEEEeCCceecee-eCceecCCCCCcccceEEEEcCHHHhCCcEEEEEEEECCC
Confidence 36777899999985422 235789999865322111101 1111 4567899999999863 3468888887654
Q ss_pred CCccCCCCcccceeEEeecc----------cccCCCCCceEEEEEeeccC
Q 010105 406 SKIPMTGASKTMGTASLSLQ----------NFISPISKLAVEQWFDLVPR 445 (518)
Q Consensus 406 ~~l~~~~~sk~lG~~s~~w~----------dll~~~~~Ls~E~w~~l~~~ 445 (518)
+++..+||.+.|+.. +++.. +.-.+++|+.|.+.
T Consensus 105 -----~~~~~~iG~~~i~l~~~~~~~~~w~~l~~~-~~~~~~~W~~L~~~ 148 (159)
T 1tjx_A 105 -----IGKNDAIGKVFVGYNSTGAELRHWSDMLAN-PRRPIAQWHTLQVE 148 (159)
T ss_dssp -----SSCCEEEEEEEEETTCCHHHHHHHHHHHHS-TTCCEEEEEECBCH
T ss_pred -----CCCCceEEEEEECCCCCCcHHHHHHHHHHC-CCCeeeeEEECcCc
Confidence 567789999999987 55654 57788999999764
No 19
>2dmg_A KIAA1228 protein; beta-sandwich, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=97.05 E-value=0.0025 Score=55.90 Aligned_cols=107 Identities=19% Similarity=0.189 Sum_probs=71.7
Q ss_pred EEEEEEeecCCCCCcCCCCceEEEEeccCCCcccccccceee---eeccccceeEEEEeec----cccEEEEEEecCCCC
Q 010105 335 VFVEIVAVKNLPEDHKDKGDLFVFFSKSQPDIFFNAKQKLTI---LSKSGMKQVASFQCEA----TGELLFELVSHSTSK 407 (518)
Q Consensus 335 v~l~iv~~~nl~~~~~~~~~lfVr~~~~q~d~~~~~~~~~~i---~s~s~~~~~~~l~CE~----t~~lv~elr~~~~~~ 407 (518)
+.|.|++++||+.....+.+-||.++....+.... +.+..+ +.++.|++.+.|.... ...|.|+|..+....
T Consensus 26 L~v~v~~a~~L~~~d~~g~dpyv~v~l~~~~~~~~-~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~L~i~V~d~d~~~ 104 (142)
T 2dmg_A 26 LIVVVHACRNLIAFSEDGSDPYVRMYLLPDKRRSG-RRKTHVSKKTLNPVFDQSFDFSVSLPEVQRRTLDVAVKNSGGFL 104 (142)
T ss_dssp EEEEEEEEECCCCSSTTCCCEEEEEEEESCCCSSS-CEECCCCCSCSSCEEEEEEEECCCHHHHHHCEEEEEEEECCCSS
T ss_pred EEEEEEEeECCCCCCCCCCCeeEEEEEEcCCCCCC-cccCCccCCCCCCCcCceEEEEecHHHhCcCEEEEEEEECCCcc
Confidence 67788999999855322268899998753222111 111222 3467899988888753 358999988765411
Q ss_pred ccCCCCcccceeEEeecccccCCCCCceEEEEEeeccCCCC
Q 010105 408 IPMTGASKTMGTASLSLQNFISPISKLAVEQWFDLVPRSGN 448 (518)
Q Consensus 408 l~~~~~sk~lG~~s~~w~dll~~~~~Ls~E~w~~l~~~~~~ 448 (518)
.+...+||.+.|++.++... . ..+.|++|.+.++.
T Consensus 105 ---~~~~~~iG~~~i~l~~~~~~--~-~~~~W~~L~~~~~~ 139 (142)
T 2dmg_A 105 ---SKDKGLLGKVLVALASEELA--K-GWTQWYDLTEDSGP 139 (142)
T ss_dssp ---CCSCCCCEEEEEECCCSTTT--T-CBCCBCCCBCSCSC
T ss_pred ---ccCCcEEEEEEEeccccccc--c-cccceeeccCCCCC
Confidence 11235899999999998753 2 67899999887543
No 20
>3pyc_A E3 ubiquitin-protein ligase smurf1; phospholipid binding, membrane associate, lipid binding PROT; 1.96A {Homo sapiens} PDB: 2jqz_A
Probab=97.03 E-value=0.0071 Score=52.39 Aligned_cols=124 Identities=11% Similarity=0.081 Sum_probs=78.1
Q ss_pred EEEEEEEEeecCCCCCc-CCCCceEEEEeccCCCcccccccceeeeeccccceeEEEEeeccccEEEEEEecCCCCccCC
Q 010105 333 VEVFVEIVAVKNLPEDH-KDKGDLFVFFSKSQPDIFFNAKQKLTILSKSGMKQVASFQCEATGELLFELVSHSTSKIPMT 411 (518)
Q Consensus 333 ~ev~l~iv~~~nl~~~~-~~~~~lfVr~~~~q~d~~~~~~~~~~i~s~s~~~~~~~l~CE~t~~lv~elr~~~~~~l~~~ 411 (518)
..+.|.|++++||+... ....+-||.++..........+ ...=+.++.|++.+.|.+.....|.|++.-+.... ..
T Consensus 5 ~~L~V~v~~a~~L~~~d~~g~sDpyv~v~~~~~~~~~kT~-v~~~t~nP~wne~f~f~v~~~~~l~~~v~d~d~~~--~~ 81 (132)
T 3pyc_A 5 IKIRLTVLCAKNLAKKDFFRLPDPFAKIVVDGSGQCHSTD-TVKNTLDPKWNQHYDLYVGKTDSITISVWNHKKIH--KK 81 (132)
T ss_dssp EEEEEEEEEEESCCCCSTTCCCCEEEEEEETTTCCEEECC-CCSSCSSCEEEEEEEEEEETTCCEEEEEEEGGGTT--SS
T ss_pred EEEEEEEEEeECCCCCCCCCCcCeEEEEEECCCCceEECC-ccCCCCCCCccCEEEEEeCCCCEEEEEEEECCCCC--CC
Confidence 45778899999997442 1235789999864322222110 11113467899999999986667999997765421 11
Q ss_pred CCcccceeEEeecccccCCCCCceEEEEEeeccCCCCCCC-CCceEEEEEe
Q 010105 412 GASKTMGTASLSLQNFISPISKLAVEQWFDLVPRSGNVSS-KPISLRIAVS 461 (518)
Q Consensus 412 ~~sk~lG~~s~~w~dll~~~~~Ls~E~w~~l~~~~~~~~~-~p~~lrva~S 461 (518)
.....||.+.|++.++.+. .-....|++|...++.... ..=.|.|.+|
T Consensus 82 ~~d~~lG~~~i~l~~l~~~--~~~~~~~~~L~~~~~~~~~~~~G~i~v~l~ 130 (132)
T 3pyc_A 82 QGAGFLGCVRLLSNAISRL--KDTGYQRLDLCKLNPSDTDAVRGQIVVSLQ 130 (132)
T ss_dssp TTTTEEEEEEECHHHHHHH--TTSCCEEEECBCSSTTCCCCCCSEEEEEEE
T ss_pred CCCCceEEEEEeHHHhhcc--cccCcEEEeeeecCCCCCCceeEEEEEEEE
Confidence 2368999999999988543 2233478999876443322 2335666555
No 21
>2q3x_A Regulating synaptic membrane exocytosis protein 1; C2 domain dimer, neurotransmitter release, transport protein; HET: MSE; 1.73A {Rattus norvegicus}
Probab=97.03 E-value=0.0018 Score=59.26 Aligned_cols=107 Identities=17% Similarity=0.162 Sum_probs=72.3
Q ss_pred EEEEEEEeecCCCCCc--CCCCceEEEEeccCCCcccccccceee--eeccccceeEEEEee-ccccEEEEEE-ecCCCC
Q 010105 334 EVFVEIVAVKNLPEDH--KDKGDLFVFFSKSQPDIFFNAKQKLTI--LSKSGMKQVASFQCE-ATGELLFELV-SHSTSK 407 (518)
Q Consensus 334 ev~l~iv~~~nl~~~~--~~~~~lfVr~~~~q~d~~~~~~~~~~i--~s~s~~~~~~~l~CE-~t~~lv~elr-~~~~~~ 407 (518)
.+.|.|++++||+... ....+-||.++...........++-.+ +.++.|++.+.|... ....|.|+|. -+..
T Consensus 31 ~L~V~v~~a~~L~~~d~~~g~~DPyv~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~~~L~~~V~~d~d~-- 108 (171)
T 2q3x_A 31 QLEVEVIRARSLTQKPGSKSTPAPYVKVYLLENGACIAKKKTRIARKTLDPLYQQSLVFDESPQGKVLQVIVWGDYGR-- 108 (171)
T ss_dssp EEEEEEEEEESCCCCC---CCCEEEEEEEEEETTEEEEEEECCCCCSCSSCEEEEEEECSSCCTTEEEEEEEEEECST--
T ss_pred EEEEEEEEeeCCCCCCcCCCCCCceEEEEEECCCccccceeCccCCCCCCCCCCcEEEEEecCCCCEEEEEEEEcCCC--
Confidence 3778889999998542 234678999986532111110111111 346789998888876 4568888887 4332
Q ss_pred ccCCCCcccceeEEeecccccCCCCCceEEEEEeeccCCCC
Q 010105 408 IPMTGASKTMGTASLSLQNFISPISKLAVEQWFDLVPRSGN 448 (518)
Q Consensus 408 l~~~~~sk~lG~~s~~w~dll~~~~~Ls~E~w~~l~~~~~~ 448 (518)
+++...||.+.|++.++.... ..+.|++|.+.+..
T Consensus 109 ---~~~d~~iG~~~i~l~~l~~~~---~~~~W~~L~~~~~~ 143 (171)
T 2q3x_A 109 ---MDHKCFMGVAQILLEELDLSS---MVIGWYKLFPPSSL 143 (171)
T ss_dssp ---TCSSEEEEEEEECGGGSCTTS---CEEEEEECBCGGGG
T ss_pred ---CCCCCEEEEEEEEHHHcccCC---CcceeEECCCcccc
Confidence 566789999999999997532 58999999887654
No 22
>2enp_A B/K protein; C2 type 1,beta sandwich, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=97.02 E-value=0.0035 Score=55.34 Aligned_cols=104 Identities=15% Similarity=0.241 Sum_probs=71.4
Q ss_pred EEEEEEEeecCCCCC--cC------CCCceEEEEeccCCCcccccccceee---eeccccceeEEEEeec----cccEEE
Q 010105 334 EVFVEIVAVKNLPED--HK------DKGDLFVFFSKSQPDIFFNAKQKLTI---LSKSGMKQVASFQCEA----TGELLF 398 (518)
Q Consensus 334 ev~l~iv~~~nl~~~--~~------~~~~lfVr~~~~q~d~~~~~~~~~~i---~s~s~~~~~~~l~CE~----t~~lv~ 398 (518)
.+.|.|++++||+.. .. ...+-||+++....+.. ..+..+ +.++.|++.+.|.... ...|.|
T Consensus 27 ~L~V~v~~a~~L~~~~d~~g~~~~~~~~dpyv~v~l~~~~~~---~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~L~~ 103 (147)
T 2enp_A 27 HLTVRVIEARDLPPPISHDGSRQDMAHSNPYVKICLLPDQKN---SKQTGVKRKTQKPVFEERYTFEIPFLEAQRRTLLL 103 (147)
T ss_dssp EEEEEEEEEECCCCSCSSCCSSCTTCCCCCEEEEEEETCCSS---CEECCCCCSCSSCCCCBCCEECCCHHHHHHSEEEE
T ss_pred EEEEEEEEEeCCCCccccccccccCCCCCcEEEEEEEeCCCc---ceEeecccCCCCCeEeeeEEEEeChHHhccCEEEE
Confidence 377888999999863 10 13578999986532211 111222 3467999999998763 357888
Q ss_pred EEEecCCCCccCCCCcccceeEEeecccccCCCCCceEEEEEeeccCCCC
Q 010105 399 ELVSHSTSKIPMTGASKTMGTASLSLQNFISPISKLAVEQWFDLVPRSGN 448 (518)
Q Consensus 399 elr~~~~~~l~~~~~sk~lG~~s~~w~dll~~~~~Ls~E~w~~l~~~~~~ 448 (518)
+|.-+.. +++..+||.+.|++.++.... ..+.|+.|.+++..
T Consensus 104 ~V~d~d~-----~~~~~~iG~~~i~l~~l~~~~---~~~~w~~L~~~~~~ 145 (147)
T 2enp_A 104 TVVDFDK-----FSRHCVIGKVSVPLCEVDLVK---GGHWWKALIPSGPS 145 (147)
T ss_dssp EEECCST-----TCCSCCCEEEEEETTTSCTTT---CCCEEECCBCCCCC
T ss_pred EEEECCC-----CcCCcEEEEEEEechhcCCCC---CccEEEEeecCCCC
Confidence 8876643 456779999999999997542 24789999987543
No 23
>3rdl_A Protein kinase C alpha type; protein kinase PKC, transferase; 1.50A {Rattus norvegicus} PDB: 3gpe_A 3rdj_A 3twy_A 1dsy_A* 4dnl_A* 2uzp_A*
Probab=97.02 E-value=0.0038 Score=54.03 Aligned_cols=104 Identities=16% Similarity=0.223 Sum_probs=70.6
Q ss_pred EEEEEEeecCCCCCc-CCCCceEEEEeccCCCcccccccceee--eeccccceeEEEEeec-c--ccEEEEEEecCCCCc
Q 010105 335 VFVEIVAVKNLPEDH-KDKGDLFVFFSKSQPDIFFNAKQKLTI--LSKSGMKQVASFQCEA-T--GELLFELVSHSTSKI 408 (518)
Q Consensus 335 v~l~iv~~~nl~~~~-~~~~~lfVr~~~~q~d~~~~~~~~~~i--~s~s~~~~~~~l~CE~-t--~~lv~elr~~~~~~l 408 (518)
+.|.|++++||+... ....+-||.++...........++-.+ +.++.|++.+.|.... . ..|.|++..+..
T Consensus 18 L~v~v~~a~~L~~~d~~~~~dpyv~v~~~~~~~~~~~~kT~~~~~t~nP~wne~f~f~~~~~~~~~~l~i~v~d~d~--- 94 (137)
T 3rdl_A 18 LHVTVRDAKNLIPMDPNGLSDPYVKLKLIPDPKNESKQKTKTIRSTLNPQWNESFTFKLKPSDKDRRLSVEIWDWDR--- 94 (137)
T ss_dssp EEEEEEEEESCCCCSTTSCCCEEEEEEEECCTTCCCCEECCCCCSCSSCEEEEEEEEECCGGGGGCEEEEEEEECCS---
T ss_pred EEEEEEEeeCCCCCCCCCCCCeeEEEEEEcCCCCCeeecCceEcCCCCCCcccEEEEEcCchhcCCEEEEEEEECCC---
Confidence 778889999998542 234678999986421100000111111 3567899999998763 2 368888877543
Q ss_pred cCCCCcccceeEEeecccccCCCCCceEEEEEeeccCCC
Q 010105 409 PMTGASKTMGTASLSLQNFISPISKLAVEQWFDLVPRSG 447 (518)
Q Consensus 409 ~~~~~sk~lG~~s~~w~dll~~~~~Ls~E~w~~l~~~~~ 447 (518)
+++..+||.++|++.++... . .+.|+.|.+.+.
T Consensus 95 --~~~~~~iG~~~i~l~~l~~~--~--~~~W~~L~~~~~ 127 (137)
T 3rdl_A 95 --TTRNDFMGSLSFGVSELMKM--P--ASGWYKLLNQEE 127 (137)
T ss_dssp --SSCCEEEEEEEEEHHHHHHS--C--EEEEEECBCHHH
T ss_pred --CCCCceEEEEEEeHHHhccC--c--cCceEECcCccc
Confidence 46778999999999999874 2 799999987643
No 24
>1rsy_A Synaptotagmin I; calcium/phospholipid binding protein; 1.90A {Rattus norvegicus} SCOP: b.7.1.2
Probab=96.98 E-value=0.0043 Score=55.32 Aligned_cols=102 Identities=15% Similarity=0.181 Sum_probs=70.4
Q ss_pred EEEEEEeecCCCCCcC-CCCceEEEEeccCCCc-ccccccceeeeeccccceeEEEEeec----cccEEEEEEecCCCCc
Q 010105 335 VFVEIVAVKNLPEDHK-DKGDLFVFFSKSQPDI-FFNAKQKLTILSKSGMKQVASFQCEA----TGELLFELVSHSTSKI 408 (518)
Q Consensus 335 v~l~iv~~~nl~~~~~-~~~~lfVr~~~~q~d~-~~~~~~~~~i~s~s~~~~~~~l~CE~----t~~lv~elr~~~~~~l 408 (518)
+.|.|++++||+.... ...+-||+++....+. ..+.+ ...=+.++.|++.+.|.... ...|.|+|..+..
T Consensus 44 L~V~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~kT~-v~~~t~nP~wne~f~f~v~~~~l~~~~L~i~V~d~d~--- 119 (152)
T 1rsy_A 44 LLVGIIQAAELPALDMGGTSDPYVKVFLLPDKKKKFETK-VHRKTLNPVFNEQFTFKVPYSELGGKTLVMAVYDFDR--- 119 (152)
T ss_dssp EEEEEEEEESCCCCSTTSCCCEEEEEEEETTCCSCEECC-CCTTCSSCEEEEEEEECCCHHHHTTCEEEEEEEECCS---
T ss_pred EEEEEEEeECCCCccCCCCcCeEEEEEEEcCCCceEecc-ccCCCCCCcCcccEEEeecHHHcCCCEEEEEEEECCC---
Confidence 6778899999985431 2357899998652221 11100 11113467999988888752 4688999887653
Q ss_pred cCCCCcccceeEEeecccccCCCCCceEEEEEeeccC
Q 010105 409 PMTGASKTMGTASLSLQNFISPISKLAVEQWFDLVPR 445 (518)
Q Consensus 409 ~~~~~sk~lG~~s~~w~dll~~~~~Ls~E~w~~l~~~ 445 (518)
+++..+||.+.|++.++.. .-.++.|++|.+.
T Consensus 120 --~~~~~~iG~~~i~l~~l~~---~~~~~~W~~L~~~ 151 (152)
T 1rsy_A 120 --FSKHDIIGEFKVPMNTVDF---GHVTEEWRDLQSA 151 (152)
T ss_dssp --SSCCEEEEEEEEEGGGCCC---SSCEEEEEECBCC
T ss_pred --CCCCcEEEEEEEEchhccC---CCCcceEEECCCC
Confidence 5677899999999999864 2368999998763
No 25
>1gmi_A Protein kinase C, epsilon type; PKC, C2 domain, X-RAY, phospholipids, PKC epsilon.; 1.7A {Rattus rattus} SCOP: b.7.1.1
Probab=96.96 E-value=0.006 Score=53.32 Aligned_cols=115 Identities=8% Similarity=0.117 Sum_probs=76.2
Q ss_pred EEEEEEEeecCCCCCcC------------CCCceEEEEeccCCCcccccccceeeeeccccceeEEEEeeccccEEEEEE
Q 010105 334 EVFVEIVAVKNLPEDHK------------DKGDLFVFFSKSQPDIFFNAKQKLTILSKSGMKQVASFQCEATGELLFELV 401 (518)
Q Consensus 334 ev~l~iv~~~nl~~~~~------------~~~~lfVr~~~~q~d~~~~~~~~~~i~s~s~~~~~~~l~CE~t~~lv~elr 401 (518)
.+.|.|++++||+.... ...+-||.++... ......+ ...=+.++.|++.+.|.-.....|.|++.
T Consensus 7 ~L~v~v~~a~~L~~~d~~~~~~~g~~~~~~~~DPyv~v~l~~-~~~~~T~-~~~~t~nP~WnE~f~f~v~~~~~L~~~V~ 84 (136)
T 1gmi_A 7 LLKIKICEAVSLKPTAWSLRDAVGPRPQTFLLDPYIALNVDD-SRIGQTA-TKQKTNSPAWHDEFVTDVCNGRKIELAVF 84 (136)
T ss_dssp EEEEEEEEEESCCCCHHHHCC-CCSSCCCCCCCEEEEEEETT-EEEEECC-CCSSCSSCEEEEEEEEEEEEECEEEEEEE
T ss_pred EEEEEEEeCcCCCCcccccccccccccCCcCcCcEEEEEECC-eEeeeee-EECCCcCCccCCEEEEEecCCCEEEEEEE
Confidence 36778899999984321 1157799987521 1111100 01113467899988888764478888887
Q ss_pred ecCCCCccCCCCcccceeEEeecccccCCCCCceEEEEEeeccCCCCCCCCCceEEEEEeecC
Q 010105 402 SHSTSKIPMTGASKTMGTASLSLQNFISPISKLAVEQWFDLVPRSGNVSSKPISLRIAVSFTI 464 (518)
Q Consensus 402 ~~~~~~l~~~~~sk~lG~~s~~w~dll~~~~~Ls~E~w~~l~~~~~~~~~~p~~lrva~S~Tp 464 (518)
-+.. +.+..+||.++|+++++... +.-.++.|++|.+. =.|+|.+++++
T Consensus 85 d~d~-----~~~dd~iG~~~i~l~~l~~~-~~~~~~~w~~L~~~--------G~i~l~l~~~~ 133 (136)
T 1gmi_A 85 HDAP-----IGYDDFVANCTIQFEELLQN-GSRHFEDWIDLEPE--------GKVYVIIDLSG 133 (136)
T ss_dssp ECCS-----SSSCEEEEEEEEEHHHHTST-TCSEEEEEEECBSS--------CEEEEEEEEEE
T ss_pred eCCC-----CCCCCEEEEEEEEHHHhccc-CCCCccEEEEcCCC--------eEEEEEEEEEe
Confidence 6543 46678999999999999975 34567999999873 24666666543
No 26
>2bwq_A Regulating synaptic membrane exocytosis protein 2; C2 domain, neurotransmitter release, transport protein; 1.41A {Rattus norvegicus} SCOP: b.7.1.2
Probab=96.92 E-value=0.0049 Score=52.91 Aligned_cols=100 Identities=16% Similarity=0.217 Sum_probs=64.8
Q ss_pred EEEEEEeecCCCCCcC-CCCceEEEEeccCCCcccccccceee---eeccccceeEEEEee-----ccccEEEEEEecCC
Q 010105 335 VFVEIVAVKNLPEDHK-DKGDLFVFFSKSQPDIFFNAKQKLTI---LSKSGMKQVASFQCE-----ATGELLFELVSHST 405 (518)
Q Consensus 335 v~l~iv~~~nl~~~~~-~~~~lfVr~~~~q~d~~~~~~~~~~i---~s~s~~~~~~~l~CE-----~t~~lv~elr~~~~ 405 (518)
+.|.|++++||+.... ...+-||.++... |..-....+..+ +.++.|++.+.|.+. ....|.|++..+..
T Consensus 20 L~v~v~~a~~L~~~d~~~~~dpyv~v~~~~-~~~~~~~~kT~v~~~t~nP~wne~f~f~~~~~~~~~~~~l~~~V~d~d~ 98 (129)
T 2bwq_A 20 LIVTILGAKDLPSREDGRPRNPYVKIYFLP-DRSDKNKRRTKTVKKTLEPKWNQTFIYSPVHRREFRERMLEITLWDQAR 98 (129)
T ss_dssp EEEEEEEEESCCCCTTSCCBCEEEEEEEES-SCSGGGEEECCCCSSBSSCEEEEEEEECSCCGGGGGGCEEEEEEEEC--
T ss_pred EEEEEEEeeCCCCCCCCCCCCCEEEEEEec-CCCCCcceecccccCCCCCccccEEEEccCCHHHhcCCeEEEEEEECCc
Confidence 7788899999985432 2357899998642 210000111221 456789999999852 24688888887654
Q ss_pred CCccCCCCcccceeEEeecccccCCCCCceEEEEEee
Q 010105 406 SKIPMTGASKTMGTASLSLQNFISPISKLAVEQWFDL 442 (518)
Q Consensus 406 ~~l~~~~~sk~lG~~s~~w~dll~~~~~Ls~E~w~~l 442 (518)
.. .++...||.+.|++.++... . .+.|++|
T Consensus 99 ~~---~~~~~~lG~~~i~l~~l~~~--~--~~~W~~L 128 (129)
T 2bwq_A 99 VR---EEESEFLGEILIELETALLD--D--EPHWYKL 128 (129)
T ss_dssp --------CEEEEEEEEEGGGCCCS--S--CEEEEEC
T ss_pred Cc---CcCCceeEEEEEEccccCCC--c--CCccEEC
Confidence 21 12378999999999999864 3 7899987
No 27
>2r83_A Synaptotagmin-1; C2A-C2B, exocytosis, calcium, cell junction, cytoplasmic vesicle, glycoprotein, lipoprotein, membrane, metal-binding palmitate; 2.70A {Homo sapiens} SCOP: b.7.1.2
Probab=96.88 E-value=0.016 Score=56.47 Aligned_cols=123 Identities=13% Similarity=0.161 Sum_probs=80.4
Q ss_pred EEEEEEEeecCCCCCc-CCCCceEEEEeccCCC-cccccccceeeeeccccceeEEEEeec----cccEEEEEEecCCCC
Q 010105 334 EVFVEIVAVKNLPEDH-KDKGDLFVFFSKSQPD-IFFNAKQKLTILSKSGMKQVASFQCEA----TGELLFELVSHSTSK 407 (518)
Q Consensus 334 ev~l~iv~~~nl~~~~-~~~~~lfVr~~~~q~d-~~~~~~~~~~i~s~s~~~~~~~l~CE~----t~~lv~elr~~~~~~ 407 (518)
.+.|.|++++||+... ....+-||.++....+ .....+ ...=+.++.|++.+.|.... ...|.|++..+..
T Consensus 20 ~L~v~v~~a~~L~~~d~~~~~dpyv~v~~~~~~~~~~~T~-~~~~~~nP~wne~f~f~v~~~~~~~~~l~~~V~d~d~-- 96 (284)
T 2r83_A 20 QLLVGIIQAAELPALDMGGTSDPYVKVFLLPDKKKKFETK-VHRKTLNPVFNEQFTFKVPYSELAGKTLVMAVYDFDR-- 96 (284)
T ss_dssp EEEEEEEEEECCCCCSSSSSCCEEEEEEEETCTTSCEECC-CCCSCSSCEEEEEEEECCCGGGCTTCEEEEEEEECCS--
T ss_pred EEEEEEEEeeCCCCCCCCCCCCeEEEEEEEcCCCceEeCC-cccCCCCCeeCceEEEEechHHhCcCEEEEEEEECCC--
Confidence 3778889999998532 1236789999864221 111110 11113467899999888753 3578888876543
Q ss_pred ccCCCCcccceeEEeecccccCCCCCceEEEEEeeccCCCCCCCCCceEEEEEeecCC
Q 010105 408 IPMTGASKTMGTASLSLQNFISPISKLAVEQWFDLVPRSGNVSSKPISLRIAVSFTIP 465 (518)
Q Consensus 408 l~~~~~sk~lG~~s~~w~dll~~~~~Ls~E~w~~l~~~~~~~~~~p~~lrva~S~Tpp 465 (518)
+++...||.++|++.++... -..+.|++|.+..+......=.+.+.+...|.
T Consensus 97 ---~~~~~~lG~~~i~l~~l~~~---~~~~~w~~L~~~~~~~~~~~G~i~l~l~~~p~ 148 (284)
T 2r83_A 97 ---FSKHDIIGEFKVPMNTVDFG---HVTEEWRDLQSAEKEEQEKLGDICFSLRYVPT 148 (284)
T ss_dssp ---SSCCCEEEEEEEEGGGCCCS---SCEEEEEECBCCSSCCCCCCCEEEEEEEEETT
T ss_pred ---CCCCceeEEEEEcchhcccC---CcceeEEEeeccccccccccccEEEEEEecCc
Confidence 56678999999999999753 36789999987654322222356666666554
No 28
>1ugk_A Synaptotagmin IV, KIAA1342; beta sandwich, structural genomics, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.7.1.2
Probab=96.85 E-value=0.013 Score=51.14 Aligned_cols=105 Identities=11% Similarity=0.138 Sum_probs=70.1
Q ss_pred EEEEEEeecCCCCCcC--CCCceEEEEeccCCCc-ccccccceeeeeccccceeEEEE-ee----ccccEEEEEEecCCC
Q 010105 335 VFVEIVAVKNLPEDHK--DKGDLFVFFSKSQPDI-FFNAKQKLTILSKSGMKQVASFQ-CE----ATGELLFELVSHSTS 406 (518)
Q Consensus 335 v~l~iv~~~nl~~~~~--~~~~lfVr~~~~q~d~-~~~~~~~~~i~s~s~~~~~~~l~-CE----~t~~lv~elr~~~~~ 406 (518)
+.|.|++++||+.... ...+-||.++....+. ..+. +...=+.++.|++.+.|+ .. ....|.|++..+..
T Consensus 24 L~v~v~~a~~L~~~d~~~~~~dpyv~v~~~~~~~~~~kT-~v~~~t~nP~wne~f~f~~v~~~~~~~~~l~i~V~d~d~- 101 (138)
T 1ugk_A 24 FVVNIKEARGLPAMDEQSMTSDPYIKMTILPEKKHKVKT-RVLRKTLDPAFDETFTFYGIPYTQIQELALHFTILSFDR- 101 (138)
T ss_dssp EEEEEEEEESCCCCBTTTTBCEEEEEEEEETTTCSEEEC-CCCSSCSSCEEEEEEEEECCCSTTGGGCEEEEEEEEECS-
T ss_pred EEEEEEEeeCCCCCCCCCCCCCCEEEEEEecCCCceEec-CcCcCCCCCcEeeEEEEcCcCHHHhccCEEEEEEEECCC-
Confidence 6778899999985432 2357899998652111 1110 011113467899999986 33 24588888887654
Q ss_pred CccCCCCcccceeEEeecccccCCCCCceEEEEEeeccCCC
Q 010105 407 KIPMTGASKTMGTASLSLQNFISPISKLAVEQWFDLVPRSG 447 (518)
Q Consensus 407 ~l~~~~~sk~lG~~s~~w~dll~~~~~Ls~E~w~~l~~~~~ 447 (518)
+++...||.+.|+++++... .=..+-|++|.+.++
T Consensus 102 ----~~~~~~lG~~~i~l~~l~~~--~~~~~~~~~l~~~~~ 136 (138)
T 1ugk_A 102 ----FSRDDIIGEVLIPLSGIELS--EGKMLMNREIISGPS 136 (138)
T ss_dssp ----SCCCCCCEEEEEECTTCCCT--TCCEEEEEECBSSSS
T ss_pred ----CCCCcEEEEEEEehhHccCC--CCcchhhhhhhcCCC
Confidence 56678999999999999764 234577899977643
No 29
>2nq3_A Itchy homolog E3 ubiquitin protein ligase; C2 domain, UBL conjugation pathway, structural genomics consortium, SGC; 1.80A {Homo sapiens} SCOP: b.7.1.1
Probab=96.81 E-value=0.0065 Score=56.17 Aligned_cols=119 Identities=16% Similarity=0.113 Sum_probs=77.5
Q ss_pred EEEEEEEeecCCC-CCcCCCCceEEEEeccCCCcccccccceeeeeccccceeEEEEeeccccEEEEEEecCCCCccCCC
Q 010105 334 EVFVEIVAVKNLP-EDHKDKGDLFVFFSKSQPDIFFNAKQKLTILSKSGMKQVASFQCEATGELLFELVSHSTSKIPMTG 412 (518)
Q Consensus 334 ev~l~iv~~~nl~-~~~~~~~~lfVr~~~~q~d~~~~~~~~~~i~s~s~~~~~~~l~CE~t~~lv~elr~~~~~~l~~~~ 412 (518)
.+.|.|++++||+ .....+.+-||.++... ...+.+ ...=+.++.|++.+.|.+.+...|.|||.-+.. ++
T Consensus 37 ~L~V~V~~A~~L~~~~~~~~sDPYv~v~~~~--~~~kT~-v~~~tlnP~Wne~f~f~v~~~~~L~~~V~D~d~-----~~ 108 (173)
T 2nq3_A 37 QLQITVISAKLKENKKNWFGPSPYVEVTVDG--QSKKTE-KCNNTNSPKWKQPLTVIVTPVSKLHFRVWSHQT-----LK 108 (173)
T ss_dssp EEEEEEEEEEECCCC--CCCCCEEEEEEETT--EEEECC-CCSSCSSCEEEEEEEEEECTTCEEEEEEEECCS-----SS
T ss_pred EEEEEEEEeECCCCcccCCCCCeEEEEEECC--EEeEcc-ccCCCCCCeECCEEEEEeCCCCEEEEEEEECCC-----CC
Confidence 3777889999998 33222357899988542 111110 111134679999999999888899999987654 56
Q ss_pred CcccceeEEeecccccCCCC-C-ceEEEEEeeccCCCCCCCCCceEEEEEe
Q 010105 413 ASKTMGTASLSLQNFISPIS-K-LAVEQWFDLVPRSGNVSSKPISLRIAVS 461 (518)
Q Consensus 413 ~sk~lG~~s~~w~dll~~~~-~-Ls~E~w~~l~~~~~~~~~~p~~lrva~S 461 (518)
+..+||.++|++++++...+ . -.++.|+.|...++. ....=.|+|.++
T Consensus 109 ~dd~lG~~~i~l~~l~~~~~~~~~~~~~~~~L~~~~~~-~~~~G~L~v~l~ 158 (173)
T 2nq3_A 109 SDVLLGTAALDIYETLKSNNMKLEEVVVTLQLGGDKEP-TETIGDLSICLD 158 (173)
T ss_dssp CCEEEEEEEEEHHHHHHHTTTEESSEEEEEEEEESSCT-TSEEEEEEEEEE
T ss_pred CCceEEEEEEEHHHhcccCCCCcceeEEEEECccCCCC-CcccEEEEEEEe
Confidence 77899999999999986422 1 235789999886431 111224555554
No 30
>1rh8_A Piccolo protein; beta-sandwich, metal binding protein; NMR {Rattus norvegicus} SCOP: b.7.1.2
Probab=96.67 E-value=0.0073 Score=52.76 Aligned_cols=106 Identities=12% Similarity=0.146 Sum_probs=72.2
Q ss_pred EEEEEEEeecCCCCCcC-CCCceEEEEeccCCCccc--------ccccceee---eeccccceeEEEE-ee----ccccE
Q 010105 334 EVFVEIVAVKNLPEDHK-DKGDLFVFFSKSQPDIFF--------NAKQKLTI---LSKSGMKQVASFQ-CE----ATGEL 396 (518)
Q Consensus 334 ev~l~iv~~~nl~~~~~-~~~~lfVr~~~~q~d~~~--------~~~~~~~i---~s~s~~~~~~~l~-CE----~t~~l 396 (518)
.+.|.|++++||+.... ...+-||.++....+..+ ..+.+..+ +.++.|++.+.|. -. ....|
T Consensus 19 ~L~V~v~~a~~L~~~d~~g~~Dpyv~v~~~~~~~~~~~~~~~~~~~~~kT~v~~~t~nP~wne~f~f~~v~~~~l~~~~l 98 (142)
T 1rh8_A 19 NLIIHILQARNLVPRDNNGYSDPFVKVYLLPGRGQVMVVQNASAEYKRRTKYVQKSLNPEWNQTVIYKSISMEQLMKKTL 98 (142)
T ss_dssp EEEEEEEEEESCCCCSSSSCSCCEEEEEETTSSCCCEECCCCCHHHHTTTTTTHHHHSCEEEEEEEECSCCHHHHTTCEE
T ss_pred EEEEEEEEecCCCCCCCCCCCCceEEEEEecCCCcccccccccccceeeccccCCCCCCCCCCEEEECCcCHHHccCCEE
Confidence 37788999999985432 235789999966432110 00011111 4567899988886 22 35689
Q ss_pred EEEEEecCCCCccCCCCcccceeEEeecccccCCCCCceEEEEEeeccCCC
Q 010105 397 LFELVSHSTSKIPMTGASKTMGTASLSLQNFISPISKLAVEQWFDLVPRSG 447 (518)
Q Consensus 397 v~elr~~~~~~l~~~~~sk~lG~~s~~w~dll~~~~~Ls~E~w~~l~~~~~ 447 (518)
.|++..+.. +++...||.+.|+++++... -..++|++|.+.++
T Consensus 99 ~i~V~d~d~-----~~~~~~lG~~~i~l~~l~~~---~~~~~W~~L~~~~~ 141 (142)
T 1rh8_A 99 EVTVWDYDR-----FSSNDFLGEVLIDLSSTSHL---DNTPRWYPLKEQTE 141 (142)
T ss_dssp EEEEEEECS-----SSCEEEEEEEEEETTSCGGG---TTCCEEEECBCCCC
T ss_pred EEEEEECCC-----CCCCceEEEEEEeccccccC---CCCCeEEECCccCC
Confidence 999987654 56678999999999998753 24679999988654
No 31
>2fk9_A Protein kinase C, ETA type; ATP-binding, metal-binding, nucleotide-binding, diacylglycerol binding, serine/threonine-protein kinase, transferase; 1.75A {Homo sapiens}
Probab=96.63 E-value=0.015 Score=53.40 Aligned_cols=104 Identities=16% Similarity=0.184 Sum_probs=69.9
Q ss_pred EEEEEEEeecCCCCCc-----------CCCCceEEEEeccCCCcccccccceeeeeccccceeEEEEeeccccEEEEEEe
Q 010105 334 EVFVEIVAVKNLPEDH-----------KDKGDLFVFFSKSQPDIFFNAKQKLTILSKSGMKQVASFQCEATGELLFELVS 402 (518)
Q Consensus 334 ev~l~iv~~~nl~~~~-----------~~~~~lfVr~~~~q~d~~~~~~~~~~i~s~s~~~~~~~l~CE~t~~lv~elr~ 402 (518)
.+.|.|++++||+..- ....+-||.++... ....+.+ ...=+.++.|++.+.|.-.....|.|++.-
T Consensus 30 ~L~V~VieA~~L~~~D~~~~~~~f~~~~g~sDPYv~v~l~~-~~~~kT~-v~~ktlnP~WNE~F~f~v~~~~~L~~~V~D 107 (157)
T 2fk9_A 30 YLRVRIGEAVGLQPTRWSLRHSLFKKGHQLLDPYLTVSVDQ-VRVGQTS-TKQKTNKPTYNEEFCANVTDGGHLELAVFH 107 (157)
T ss_dssp EEEEEEEEEECCCCCHHHHHTTTSSSSCCCCCEEEEEEETT-EEEEECC-CCSSCSSCEEEEEEEEEEEEECEEEEEEEE
T ss_pred EEEEEEEEEECCCCccccccccccccCCCCCCeEEEEEECC-EeeEEee-ecCCCCCCccCcEEEEEcCCCCEEEEEEEE
Confidence 3778889999998432 01257899987531 1111110 111145689999988887655678888765
Q ss_pred cCCCCccCCCCcccceeEEeecccccCCC-CCceEEEEEeecc
Q 010105 403 HSTSKIPMTGASKTMGTASLSLQNFISPI-SKLAVEQWFDLVP 444 (518)
Q Consensus 403 ~~~~~l~~~~~sk~lG~~s~~w~dll~~~-~~Ls~E~w~~l~~ 444 (518)
... +.+...||+++|+++++.... +.-..+.|++|.+
T Consensus 108 ~d~-----~~~dd~iG~~~i~l~~l~~~~~~~~~~~~W~~L~~ 145 (157)
T 2fk9_A 108 ETP-----LGYDHFVANCTLQFQELLRTTGASDTFEGWVDLEP 145 (157)
T ss_dssp CCS-----SSSCEEEEEEEEEHHHHHHHHTTCSEEEEEEECBS
T ss_pred CCC-----CCCCCEEEEEEEEHHHhhcccCCCCcccEEEECCC
Confidence 432 456789999999999998630 2357899999976
No 32
>2z0u_A WW domain-containing protein 1; C2 domain, alternative splicing, coiled coil, cytoplasm, phosphorylation, polymorphism, lipid binding protein; 2.20A {Homo sapiens}
Probab=96.53 E-value=0.012 Score=53.22 Aligned_cols=102 Identities=14% Similarity=0.209 Sum_probs=70.6
Q ss_pred EEEEEEeecCCCCCc-CCCCceEEEEeccCC--Cc--ccccccceeeeeccccceeEEEEeec----cccEEEEEEecCC
Q 010105 335 VFVEIVAVKNLPEDH-KDKGDLFVFFSKSQP--DI--FFNAKQKLTILSKSGMKQVASFQCEA----TGELLFELVSHST 405 (518)
Q Consensus 335 v~l~iv~~~nl~~~~-~~~~~lfVr~~~~q~--d~--~~~~~~~~~i~s~s~~~~~~~l~CE~----t~~lv~elr~~~~ 405 (518)
+.|.|++++||+... ....+-||+++.... ++ ..+.+ ...=+.++.|++.+.|.... ...|.|++.-+..
T Consensus 45 L~V~Vi~a~~L~~~d~~g~sDPyVkv~l~~~~~~~~~~~kT~-v~~~tlnP~wnE~F~f~v~~~~l~~~~L~~~V~d~d~ 123 (155)
T 2z0u_A 45 FAILIIQLSNLSALLQQQDQKVNIRVAVLPCSESTTCLFRTR-PLDASDTLVFNEVFWVSMSYPALHQKTLRVDVCTTDR 123 (155)
T ss_dssp EEEEEEEEECGGGTCCSCCSEEEEEEEEESCSCHHHHEEECC-CEECCSSEEEEEEEEEECCHHHHHHCEEEEEEEEECT
T ss_pred EEEEEEEccCcCCcccCCCCCEEEEEEEecCCCCCccceeCC-cCCCCCCCccccEEEEEcCHHHhCcCEEEEEEEECCC
Confidence 677889999998542 233688999997642 32 11111 11113467899999888653 4578888887654
Q ss_pred CCccCCCCcccceeEEeecccccCCCCCceEEEEEeecc
Q 010105 406 SKIPMTGASKTMGTASLSLQNFISPISKLAVEQWFDLVP 444 (518)
Q Consensus 406 ~~l~~~~~sk~lG~~s~~w~dll~~~~~Ls~E~w~~l~~ 444 (518)
+++..+||.+.|+++++.. ..-..+.|+.|.|
T Consensus 124 -----~~~~d~iG~~~i~l~~l~~--~~~~~~~W~~L~~ 155 (155)
T 2z0u_A 124 -----SHLEECLGGAQISLAEVCR--SGERSTRWYNLLS 155 (155)
T ss_dssp -----TSCEEEEEEEEEECTTSCT--TCCCEEEEEEEBC
T ss_pred -----CCCCcEEEEEEEEHHHccC--CCCccccceEccC
Confidence 4677899999999999963 2446789999864
No 33
>2chd_A Rabphilin-3A, exophilin-1; C2 domain, C2A, calcium binding, synaptic EXOC metal-binding, protein transport, synapse, transport, zinc-; 1.92A {Rattus norvegicus} PDB: 2k3h_A
Probab=96.28 E-value=0.033 Score=48.63 Aligned_cols=101 Identities=14% Similarity=0.109 Sum_probs=68.0
Q ss_pred EEEEEEeecCCCCCcC-CCCceEEEEeccCCCcccccccceee---eeccccceeEEEEe--ec---cccEEEEEEecCC
Q 010105 335 VFVEIVAVKNLPEDHK-DKGDLFVFFSKSQPDIFFNAKQKLTI---LSKSGMKQVASFQC--EA---TGELLFELVSHST 405 (518)
Q Consensus 335 v~l~iv~~~nl~~~~~-~~~~lfVr~~~~q~d~~~~~~~~~~i---~s~s~~~~~~~l~C--E~---t~~lv~elr~~~~ 405 (518)
+.|.|++++||+.... ...+-||+++......... ..+..+ +.++.|++.+.|.. .. ...|.|+|..+..
T Consensus 31 L~V~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~-~~kT~v~~~t~nP~wne~f~f~~~~~~~~~~~~l~i~V~d~d~ 109 (142)
T 2chd_A 31 LQCTIIRAKGLKPMDSNGLADPYVKLHLLPGASKSN-KLRTKTLRNTRNPVWNETLQYHGITEEDMQRKTLRISVCDEDK 109 (142)
T ss_dssp EEEEEEEEESCCCCCTTSCCCEEEEEEEESCCSGGG-EEECCCCCSCSSCEEEEEEEEESCCHHHHHHCEEEEEEEEECT
T ss_pred EEEEEEEecCCCCCCCCCCCCCEEEEEEEcCCCCcc-eeeCCcCCCCCCCcCcCEEEEcccCHHHccCCEEEEEEEECCC
Confidence 6778899999985432 2357899999663211111 111222 44678999988872 21 3689999987754
Q ss_pred CCccCCCCcccceeEEeecccccCCCCCceEEEEEeecc
Q 010105 406 SKIPMTGASKTMGTASLSLQNFISPISKLAVEQWFDLVP 444 (518)
Q Consensus 406 ~~l~~~~~sk~lG~~s~~w~dll~~~~~Ls~E~w~~l~~ 444 (518)
+++...||.++|+++++.... ..+-|++|..
T Consensus 110 -----~~~d~~iG~~~i~l~~l~~~~---~~~~~~~L~~ 140 (142)
T 2chd_A 110 -----FGHNEFIGETRFSLKKLKANQ---RKNFNICLER 140 (142)
T ss_dssp -----TSCEEEEEEEEEEGGGCCTTC---CEEEEEECBC
T ss_pred -----CCCCcEEEEEEEEHHHcCCCC---ccEEEEeccc
Confidence 456789999999999998642 5777777654
No 34
>2r83_A Synaptotagmin-1; C2A-C2B, exocytosis, calcium, cell junction, cytoplasmic vesicle, glycoprotein, lipoprotein, membrane, metal-binding palmitate; 2.70A {Homo sapiens} SCOP: b.7.1.2
Probab=96.13 E-value=0.019 Score=55.82 Aligned_cols=105 Identities=18% Similarity=0.264 Sum_probs=71.4
Q ss_pred EEEEEEEeecCCCCCcC-CCCceEEEEeccCCCcccccccceee---eeccccceeEEEEeec----cccEEEEEEecCC
Q 010105 334 EVFVEIVAVKNLPEDHK-DKGDLFVFFSKSQPDIFFNAKQKLTI---LSKSGMKQVASFQCEA----TGELLFELVSHST 405 (518)
Q Consensus 334 ev~l~iv~~~nl~~~~~-~~~~lfVr~~~~q~d~~~~~~~~~~i---~s~s~~~~~~~l~CE~----t~~lv~elr~~~~ 405 (518)
.+.|.|++++||+.... ...+-||+++......... +.+..+ +.++.|++.+.|.+.. ...|.|++.-+..
T Consensus 151 ~l~v~v~~a~~L~~~d~~~~~dpyv~v~~~~~~~~~~-~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~l~i~V~d~d~ 229 (284)
T 2r83_A 151 KLTVVILEAKNLKKMDVGGLSDPYVKIHLMQNGKRLK-KKKTTIKKNTLNPYYNESFSFEVPFEQIQKVQVVVTVLDYDK 229 (284)
T ss_dssp EEEEEEEEEESCCCCSTTSCCCEEEEEEEEETTEEEE-EEECCCCCSCSSCEEEEEEEEECCTTTGGGEEEEEEEEECCS
T ss_pred ceEEEEEEeECCCCcCCCCCcCeEEEEEEEeCCcEee-eeccceecCCCCCEEceeEEEeCCHHHhCceEEEEEEEeCCC
Confidence 36778899999985421 2357899998653221111 111222 3457899999998863 3468888887654
Q ss_pred CCccCCCCcccceeEEeecc----------cccCCCCCceEEEEEeeccC
Q 010105 406 SKIPMTGASKTMGTASLSLQ----------NFISPISKLAVEQWFDLVPR 445 (518)
Q Consensus 406 ~~l~~~~~sk~lG~~s~~w~----------dll~~~~~Ls~E~w~~l~~~ 445 (518)
+++..+||.+.|+.+ +++.. |.-.+++|..|.+.
T Consensus 230 -----~~~~~~iG~~~i~l~~~~~~~~~w~~~~~~-~~~~~~~W~~L~~~ 273 (284)
T 2r83_A 230 -----IGKNDAIGKVFVGYNSTGAELRHWSDMLAN-PRRPIAQWHTLQVE 273 (284)
T ss_dssp -----SSCCCEEEEEEEETTCCHHHHHHHHHHHHS-TTSCEEEEEECBCH
T ss_pred -----CCCCcEEEEEEECCCCCCcHHHHHHHHHHC-CCCchheeeecCCc
Confidence 567889999999965 45654 67788999999775
No 35
>1wfm_A Synaptotagmin XIII; C2 domain, exocytosis, neurotransmitter release, riken structural genomics/proteomics initiative, RSGI, structural genomics; NMR {Homo sapiens} SCOP: b.7.1.2
Probab=95.82 E-value=0.062 Score=47.03 Aligned_cols=101 Identities=17% Similarity=0.162 Sum_probs=68.5
Q ss_pred EEEEEEeecCCCCCcCCCCceEEEEeccCCCcccccccceee---eeccccceeEEEEeec----cccEEEEEEecCCCC
Q 010105 335 VFVEIVAVKNLPEDHKDKGDLFVFFSKSQPDIFFNAKQKLTI---LSKSGMKQVASFQCEA----TGELLFELVSHSTSK 407 (518)
Q Consensus 335 v~l~iv~~~nl~~~~~~~~~lfVr~~~~q~d~~~~~~~~~~i---~s~s~~~~~~~l~CE~----t~~lv~elr~~~~~~ 407 (518)
+.|.|++++|.....+ .+-||+++....+..-. .+..+ +.++.|++.+.|.... ...|.|++.-+..
T Consensus 28 L~V~v~~a~~~d~~g~--sDPyv~v~l~~~~~~~~--~kT~v~~~tlnP~wnE~f~f~v~~~~l~~~~L~~~V~d~d~-- 101 (138)
T 1wfm_A 28 LFVTRLEAVTSNHDGG--CDCYVQGSVANRTGSVE--AQTALKKRQLHTTWEEGLVLPLAEEELPTATLTLTLRTCDR-- 101 (138)
T ss_dssp EEEEEEEEECCCCSSC--CCEEEEEEEEETTEEEE--EECCCCCCCSSEECSSCEEEECCTTSSTTCEEEEEEEECCS--
T ss_pred EEEEEEEEEcCCCCCC--cceEEEEEEEcCCCccc--EecccCcCCCCCcCCceEEEEecHHHcCCCEEEEEEEECCC--
Confidence 6777889987544443 67899998753222110 11112 3467899999998653 3578888876543
Q ss_pred ccCCCCcccceeEEeecccccCCCCCceEEEEEeeccCCC
Q 010105 408 IPMTGASKTMGTASLSLQNFISPISKLAVEQWFDLVPRSG 447 (518)
Q Consensus 408 l~~~~~sk~lG~~s~~w~dll~~~~~Ls~E~w~~l~~~~~ 447 (518)
+++..+||.+.|++.++-.. -..+.|++|.+...
T Consensus 102 ---~~~dd~lG~~~i~l~~l~~~---~~~~~W~~L~~~~~ 135 (138)
T 1wfm_A 102 ---FSRHSVAGELRLGLDGTSVP---LGAAQWGELKTSGP 135 (138)
T ss_dssp ---SCTTSCSEEEEEESSSSSSC---TTCCEEEECCCCSC
T ss_pred ---CCCCcEEEEEEEEcccccCc---ccccceeeCcCCCc
Confidence 56778999999999998532 25689999987543
No 36
>1dqv_A Synaptotagmin III; beta sandwich, calcium ION, C2 domain, endocytosis/exocytosis complex; 3.20A {Rattus rattus} SCOP: b.7.1.2 b.7.1.2 PDB: 3hn8_A
Probab=95.20 E-value=0.012 Score=58.28 Aligned_cols=107 Identities=19% Similarity=0.263 Sum_probs=72.0
Q ss_pred EEEEEEEeecCCCCCc-CCCCceEEEEeccCCCcccccccceee---eeccccceeEEEEeec----cccEEEEEEecCC
Q 010105 334 EVFVEIVAVKNLPEDH-KDKGDLFVFFSKSQPDIFFNAKQKLTI---LSKSGMKQVASFQCEA----TGELLFELVSHST 405 (518)
Q Consensus 334 ev~l~iv~~~nl~~~~-~~~~~lfVr~~~~q~d~~~~~~~~~~i---~s~s~~~~~~~l~CE~----t~~lv~elr~~~~ 405 (518)
.+.|.|++++||+... ....+-||+++......... +.+..+ +.++.|++.+.|.... ...|.|++.-+..
T Consensus 153 ~l~v~v~~a~~L~~~d~~g~~Dpyv~v~l~~~~~~~~-~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~L~i~V~d~d~ 231 (296)
T 1dqv_A 153 LLTVTIIKASNLKAMDLTGFSDPYVKASLISEGRRLK-KRKTSIKKNTLNPTYNEALVFDVAPESVENVGLSIAVVDYDC 231 (296)
T ss_dssp EEEEEEEEEESCCCCSSSSCCCEEEEECCCTTCCTTS-CEECCCCCSCSSCEEEECCCCCCCSGGGGSCCCCCEEEECCS
T ss_pred eeEEEEEEeecCCccCCCCCCCcEEEEEEEeCCcCcc-ceecceecCCCCCeECceEEEEcCHHHccCcEEEEEEEeCCC
Confidence 4677789999997542 22358899999763222111 112222 3457899988887653 2468889887654
Q ss_pred CCccCCCCcccceeEEee-----------cccccCCCCCceEEEEEeeccCCC
Q 010105 406 SKIPMTGASKTMGTASLS-----------LQNFISPISKLAVEQWFDLVPRSG 447 (518)
Q Consensus 406 ~~l~~~~~sk~lG~~s~~-----------w~dll~~~~~Ls~E~w~~l~~~~~ 447 (518)
+++..+||.+.|+ |.+|+.. |.-.+++|..|.+.++
T Consensus 232 -----~~~~~~iG~~~i~l~~~~~~~~~~W~~~~~~-~~~~~~~w~~L~~~~~ 278 (296)
T 1dqv_A 232 -----IGHNEVIGVCRVGPEAADPHGREHWAEMLAN-PRKPVEHWHQLVEEKT 278 (296)
T ss_dssp -----SSCCEEEEECCCSSCTTCHHHHHHHHTSSSS-SSSCSCSCCCCBBCC-
T ss_pred -----CCCCceEEEEEECCccCCchhHHHHHHHHhC-CCCceeEeeeccCccc
Confidence 5677889999988 5566664 6778899999888766
No 37
>2cjt_A UNC-13 homolog A, MUNC13-1; phorbol-ester binding, neurotransmitter release, RIM, MUNC13 domains, exocytosis, metal-binding; 1.44A {Rattus norvegicus} SCOP: b.7.1.1
Probab=94.54 E-value=0.39 Score=41.91 Aligned_cols=95 Identities=17% Similarity=0.108 Sum_probs=64.5
Q ss_pred EEEEEEEeecCCCCCcCCCCceEEEEeccCCCccccccccee--eeeccccceeEEEEee-ccccEEEEEEecCCCCccC
Q 010105 334 EVFVEIVAVKNLPEDHKDKGDLFVFFSKSQPDIFFNAKQKLT--ILSKSGMKQVASFQCE-ATGELLFELVSHSTSKIPM 410 (518)
Q Consensus 334 ev~l~iv~~~nl~~~~~~~~~lfVr~~~~q~d~~~~~~~~~~--i~s~s~~~~~~~l~CE-~t~~lv~elr~~~~~~l~~ 410 (518)
.++|.|+++++++...+ .+-||.++ .+. . +.+.. =+.++.|++.+.|... +...|.|++.-+.
T Consensus 6 ~L~V~V~~A~~l~~~g~--~DPYv~v~-~~~--~---kt~~~~~~t~nP~WnE~f~f~v~~~~~~L~~~V~D~d------ 71 (131)
T 2cjt_A 6 LLCVGVKKAKFDGAQEK--FNTYVTLK-VQN--V---KSTTIAVRGSQPSWEQDFMFEINRLDLGLTVEVWNKG------ 71 (131)
T ss_dssp EEEEEEEEEECSSCGGG--CEEEEEEE-ETT--E---EEECCCEESSSCEEEEEEEEEECCCSSEEEEEEEECC------
T ss_pred EEEEEEEEeECCCCCCC--cCeEEEEE-ecC--E---EEeEecCCCCCceECCEEEEEEeCCCCeEEEEEEECC------
Confidence 37788899999975443 68899998 221 1 11111 1346799999999887 5567999988764
Q ss_pred CCCcccceeEEeecccccCCCCCceEEEEEeec
Q 010105 411 TGASKTMGTASLSLQNFISPISKLAVEQWFDLV 443 (518)
Q Consensus 411 ~~~sk~lG~~s~~w~dll~~~~~Ls~E~w~~l~ 443 (518)
+.+...||.+.|+++++.... .-....|.++.
T Consensus 72 ~~~dd~iG~~~i~l~~l~~~~-~~~~~~~~~~~ 103 (131)
T 2cjt_A 72 LIWDTMVGTVWIPLRTIRQSN-EEGPGEWLTLD 103 (131)
T ss_dssp SSCEEEEEEEEEEGGGSCBCS-SCCCCEEEECB
T ss_pred CCCCCeEEEEEEEHHHhhhcC-CCCccccEEcc
Confidence 245789999999999998642 22222455554
No 38
>1dqv_A Synaptotagmin III; beta sandwich, calcium ION, C2 domain, endocytosis/exocytosis complex; 3.20A {Rattus rattus} SCOP: b.7.1.2 b.7.1.2 PDB: 3hn8_A
Probab=94.26 E-value=0.42 Score=47.03 Aligned_cols=121 Identities=15% Similarity=0.209 Sum_probs=76.2
Q ss_pred EEEEEEEeecCCCCCc-CCCCceEEEEeccCCCcccccccceee---eeccccceeEEEEeec----cccEEEEEEecCC
Q 010105 334 EVFVEIVAVKNLPEDH-KDKGDLFVFFSKSQPDIFFNAKQKLTI---LSKSGMKQVASFQCEA----TGELLFELVSHST 405 (518)
Q Consensus 334 ev~l~iv~~~nl~~~~-~~~~~lfVr~~~~q~d~~~~~~~~~~i---~s~s~~~~~~~l~CE~----t~~lv~elr~~~~ 405 (518)
++.|.|++++||+... ....+-||+++.. +|..- ..+..+ +.++.|++.+.|.... ...|.|+|.-+..
T Consensus 21 ~L~v~v~~a~~L~~~d~~g~~dPyv~v~l~-~~~~~--~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~L~~~V~d~d~ 97 (296)
T 1dqv_A 21 QLVVRILQALDLPAKDSNGFSDPYVKIYLL-PDRKK--KFQTKVHRKTLNPIFNETFQFSVPLAELAQRKLHFSVYDFDR 97 (296)
T ss_dssp EEEEEEEEEECCCCCSTTSCCCEEEEEECT-TSTTS--CEECCCCCSCSSCEEEEEEEEECCGGGGSSCCCEEEEEECCS
T ss_pred EEEEEEEEeECCCCcCCCCCcCeEEEEEEE-cCCCe--eEeCCccCCCCCCcEeeEEEEEecHHHhcCCEEEEEEEEcCC
Confidence 4788889999998542 2235789999975 33111 111222 3567999999999853 3489999887653
Q ss_pred CCccCCCCcccceeEEee-cccccCCCCCceEEEEEeeccCCCCCCCCCceEEEEEeecCC
Q 010105 406 SKIPMTGASKTMGTASLS-LQNFISPISKLAVEQWFDLVPRSGNVSSKPISLRIAVSFTIP 465 (518)
Q Consensus 406 ~~l~~~~~sk~lG~~s~~-w~dll~~~~~Ls~E~w~~l~~~~~~~~~~p~~lrva~S~Tpp 465 (518)
+++..+||.+.|+ ..++... .-..+.|++|.+..+.. ...-.+.+.++..|+
T Consensus 98 -----~~~~~~iG~~~i~~l~~~~~~--~~~~~~w~~L~~~~~~~-~~~G~i~vsl~y~~~ 150 (296)
T 1dqv_A 98 -----FSRHDLIGQVVLDNLLELAEQ--PPDRPLWRDILEGGSEK-ADLGELNFSLCYLPT 150 (296)
T ss_dssp -----SSCCCEEEEEECCCTTGGGSS--CSSCCCCEECBCCSSCC-SCCCEEEEEEEEETT
T ss_pred -----CCCCceEEEEEeccccccccC--Cccceeeeccccccccc-cccceEEEEEEeccc
Confidence 5677899999995 5455432 22467899997754321 112245555555443
No 39
>3jzy_A Intersectin 2; C2 domain, structural genomics consortium (SGC), endocytosis; 1.56A {Homo sapiens} PDB: 3qbv_B* 1ki1_B
Probab=92.51 E-value=0.4 Score=50.47 Aligned_cols=107 Identities=11% Similarity=0.146 Sum_probs=71.8
Q ss_pred eEEEEEEEEEeecCCCCCc-CCCCceEEEEeccCCCcccccccceeeeeccccceeEEEEeec--cccEEEEEEecCCCC
Q 010105 331 KIVEVFVEIVAVKNLPEDH-KDKGDLFVFFSKSQPDIFFNAKQKLTILSKSGMKQVASFQCEA--TGELLFELVSHSTSK 407 (518)
Q Consensus 331 ~~~ev~l~iv~~~nl~~~~-~~~~~lfVr~~~~q~d~~~~~~~~~~i~s~s~~~~~~~l~CE~--t~~lv~elr~~~~~~ 407 (518)
.+-.+.|.|++++|++... ....+-||.++.. +.+ ...+ ...=+.++.|++.+.|.... ...|.|+|.-+..
T Consensus 385 ~~~~l~v~v~~a~~L~~~d~~~~sdpyv~v~~~-~~~-~~T~-~~~~t~nP~w~e~f~f~~~~~~~~~l~~~v~d~d~-- 459 (510)
T 3jzy_A 385 GIGRLMVHVIEATELKACKPNGKSNPYCEISMG-SQS-YTTR-TIQDTLNPKWNFNCQFFIKDLYQDVLCLTLFDRDQ-- 459 (510)
T ss_dssp -CEEEEEEEEEEESCCCCSTTSCCCEEEEEEET-TEE-EECC-CCSSCSSCEEEEEEEEEESCTTTCEEEEEEEECCS--
T ss_pred CCceEEEEeceeecCCCCCCCCCCCeEEEEEEC-Cee-ccCC-ccCCCCCCccCceEEEEecCCCCCEEEEEEEeCCC--
Confidence 3445788899999997542 2346789998853 211 1110 11113567899999998873 3468888876543
Q ss_pred ccCCCCcccceeEEeecccccCCC-CCceEEEEEeeccC
Q 010105 408 IPMTGASKTMGTASLSLQNFISPI-SKLAVEQWFDLVPR 445 (518)
Q Consensus 408 l~~~~~sk~lG~~s~~w~dll~~~-~~Ls~E~w~~l~~~ 445 (518)
+++...||.+++++.++.... +.-.++.|+.|...
T Consensus 460 ---~~~~d~lG~~~~~l~~l~~~~~~~~~~~~~~~l~~~ 495 (510)
T 3jzy_A 460 ---FSPDDFLGRTEIPVAKIRTEQESKGPMTRRLLLHEV 495 (510)
T ss_dssp ---SSSCCEEEEEEEEHHHHHHHHHHHCSCCEEEECBSS
T ss_pred ---CCCCCceEEEEEEHHHhccccCCCCceeeeecCCCC
Confidence 567789999999999998532 12347899998765
No 40
>2cjs_A UNC-13 homolog A, MUNC13-1; neurotransmitter transport, zinc finger, synapto phorbol-ester binding; 1.78A {Rattus norvegicus} SCOP: b.7.1.1
Probab=92.47 E-value=0.68 Score=42.37 Aligned_cols=82 Identities=18% Similarity=0.103 Sum_probs=60.0
Q ss_pred EEEEEEEeecCCCCCcCCCCceEEEEeccCCCcccccccceee---eeccccceeEEEEee-ccccEEEEEEecCCCCcc
Q 010105 334 EVFVEIVAVKNLPEDHKDKGDLFVFFSKSQPDIFFNAKQKLTI---LSKSGMKQVASFQCE-ATGELLFELVSHSTSKIP 409 (518)
Q Consensus 334 ev~l~iv~~~nl~~~~~~~~~lfVr~~~~q~d~~~~~~~~~~i---~s~s~~~~~~~l~CE-~t~~lv~elr~~~~~~l~ 409 (518)
-++|.|+++++++...+ .+-||.++ .|. . + +..+ ..++.|++.+.|... ....|.|++.-+.
T Consensus 15 ~L~V~V~~A~~l~~~g~--~DPYV~v~-~~~--~---k-t~~~~~~t~nP~WnE~f~f~v~~~~~~L~~~V~D~d----- 80 (167)
T 2cjs_A 15 LLCVGVKKAKFDGAQEK--FNTYVTLK-VQN--V---E-STTIAVRGSQPSWEQDFMFEINRLDLGLTVEVWNKG----- 80 (167)
T ss_dssp EEEEEEEEEECSSCGGG--CEEEEEEE-ETT--E---E-EECCCEESSSCEEEEEEEEECCCTTSEEEEEEEECC-----
T ss_pred EEEEEEEEEECCCCCCC--CCeEEEEE-ecc--e---E-EEEecCCCCCCCCCCEEEEEeeCCCCEEEEEEEECC-----
Confidence 37778899999975443 68899998 221 1 1 1112 346799999999887 5678999988764
Q ss_pred CCCCcccceeEEeecccccCC
Q 010105 410 MTGASKTMGTASLSLQNFISP 430 (518)
Q Consensus 410 ~~~~sk~lG~~s~~w~dll~~ 430 (518)
+.+..+||++.|+++++...
T Consensus 81 -~~~dd~iG~~~i~L~~l~~~ 100 (167)
T 2cjs_A 81 -LIWDTMVGTVWIPLRTIRQS 100 (167)
T ss_dssp -SSCCEEEEEEEEEGGGSCBC
T ss_pred -CCCCceEEEEEEEHHHhccc
Confidence 24578999999999999764
No 41
>3l9b_A Otoferlin; C2-domain, beta-sheets, cell membrane, synaptic V hearing, membrane, synapse, transmembrane, membrane protein; 1.95A {Rattus norvegicus}
Probab=90.86 E-value=0.98 Score=41.09 Aligned_cols=118 Identities=16% Similarity=0.234 Sum_probs=70.9
Q ss_pred EEEEEEEEEeecCCCCCcCCCCceEEEEeccCCCccccccccee-eeeccccceeEEEEeec----cccEEEEEEecCCC
Q 010105 332 IVEVFVEIVAVKNLPEDHKDKGDLFVFFSKSQPDIFFNAKQKLT-ILSKSGMKQVASFQCEA----TGELLFELVSHSTS 406 (518)
Q Consensus 332 ~~ev~l~iv~~~nl~~~~~~~~~lfVr~~~~q~d~~~~~~~~~~-i~s~s~~~~~~~l~CE~----t~~lv~elr~~~~~ 406 (518)
-|.+.|-|..++|+|-.+. .-.-|.|+ +.++. .+.++ -.-++-|++++.+-=-+ ...|.++|..+..
T Consensus 20 ~msL~V~l~~a~~Lpg~~D--p~akv~FR---g~k~k--Tkvi~~~~~npvfnE~F~wpl~~~ld~~e~L~v~V~d~~~- 91 (144)
T 3l9b_A 20 HMALIVHLKTVSELRGRAD--RIAKVTFR---GQSFY--SRVLENCEDVADFDETFRWPVASSIDRNEVLEIQIFNYSK- 91 (144)
T ss_dssp CEEEEEEEEEEESCCSCEE--EEEEEEET---TEEEE--CCCEEEECSCEEEEEEEEEEESSCCCTTCEEEEEEEEECT-
T ss_pred cEEEEEEEEEecCCCCCCC--CeEEEEEe---cccee--eEEeccCCCCceEcceEEecCCCCCCCCCEEEEEEEECcc-
Confidence 3567777789999995443 22233333 22211 11232 23456778866553222 3356666666554
Q ss_pred CccCCCCcccceeEEeecccccCCCCCceEEEEEeeccCCCCCCCCCceEEEEEeecCCc
Q 010105 407 KIPMTGASKTMGTASLSLQNFISPISKLAVEQWFDLVPRSGNVSSKPISLRIAVSFTIPT 466 (518)
Q Consensus 407 ~l~~~~~sk~lG~~s~~w~dll~~~~~Ls~E~w~~l~~~~~~~~~~p~~lrva~S~Tppv 466 (518)
+.+.++||++.+++++|..+ +.|++. ..|...++.... ..+-+.++-.||-
T Consensus 92 ----v~~nrlIG~~~i~Lq~lv~~-~~l~l~--~~LvD~n~~~~~--a~I~l~l~Y~pp~ 142 (144)
T 3l9b_A 92 ----VFSNKLIGTFRMVLQKVVEE-NRVEVS--DTLIDDNNAIIK--TSLSMEVRYQAAD 142 (144)
T ss_dssp ----TSCCEEEEEEEEESHHHHHH-SEEEEE--EEEECTTSCEEE--EEEEEEEEEEETT
T ss_pred ----ccCCCEEEEEEEEhHHhccC-CeEEEe--ecccCCCCCccc--cEEEEEEEecCCC
Confidence 55779999999999999997 577664 677665544211 4677777767764
No 42
>1cjy_A CPLA2, protein (cytosolic phospholipase A2); lipid-binding, hydrolase; HET: MES; 2.50A {Homo sapiens} SCOP: b.7.1.1 c.19.1.2 PDB: 1bci_A
Probab=89.09 E-value=1.2 Score=50.45 Aligned_cols=101 Identities=16% Similarity=0.109 Sum_probs=70.8
Q ss_pred EEEEEEEEeecCCCC---C-cCCCCceEEEEeccC-CCcccccccceee--eeccccceeEEEEeec--cccEEEEEEec
Q 010105 333 VEVFVEIVAVKNLPE---D-HKDKGDLFVFFSKSQ-PDIFFNAKQKLTI--LSKSGMKQVASFQCEA--TGELLFELVSH 403 (518)
Q Consensus 333 ~ev~l~iv~~~nl~~---~-~~~~~~lfVr~~~~q-~d~~~~~~~~~~i--~s~s~~~~~~~l~CE~--t~~lv~elr~~ 403 (518)
-.+.|.|++++||+. . .....+-||.++... +....+ +-.+ +.++.|++.+.|.+.. ...|.|+|.-+
T Consensus 18 g~L~V~Vi~A~nL~~~~~~D~~g~sDPYV~V~l~~~~~~k~k---Tkvik~tlNPvWNEtF~F~v~~~~~~~L~~~V~D~ 94 (749)
T 1cjy_A 18 HKFTVVVLRATKVTKGAFGDMLDTPDPYVELFISTTPDSRKR---TRHFNNDINPVWNETFEFILDPNQENVLEITLMDA 94 (749)
T ss_dssp EEEEEEEEEEECCCSCHHHHHHCCCCEEEEEECTTSTTCCEE---CCCCTTCSSCEEEEEEEEEECTTSCCBCEEEEEEC
T ss_pred cEEEEEEEEEECCCCccccCCCCCcCeEEEEEEecCCCCeEe---cceEcCCCCCeeeeEEEEEecCCCCCEEEEEEEEC
Confidence 347788899999986 2 112367899998652 111111 1112 3467999999999873 56888888776
Q ss_pred CCCCccCCCCcccceeEEeecccccCCCCCceEEEEEeeccC
Q 010105 404 STSKIPMTGASKTMGTASLSLQNFISPISKLAVEQWFDLVPR 445 (518)
Q Consensus 404 ~~~~l~~~~~sk~lG~~s~~w~dll~~~~~Ls~E~w~~l~~~ 445 (518)
.. ++ ...||.+.|++++|.. .-..+.|++|.+.
T Consensus 95 D~-----~~-ddfIG~v~I~L~~L~~---g~~~~~w~~L~~~ 127 (749)
T 1cjy_A 95 NY-----VM-DETLGTATFTVSSMKV---GEKKEVPFIFNQV 127 (749)
T ss_dssp CS-----SS-CEEEEEECCBSTTSCT---TCCCCEEEEETTT
T ss_pred CC-----CC-CceeEEEEEEHHHcCC---CCceEEEEecCCC
Confidence 54 45 7899999999999964 3456899999775
No 43
>1djx_A PLC-D1, phosphoinositide-specific phospholipase C, isozyme delta1; phosphoric diester hydrolase, hydrolase, lipid degradation, transducer; HET: I3P; 2.30A {Rattus norvegicus} SCOP: a.39.1.7 b.7.1.1 c.1.18.1 PDB: 1djg_A 1dji_A 1djh_A* 1djw_A* 1djy_A* 1djz_A* 2isd_A 1qas_A 1qat_A
Probab=87.33 E-value=3.9 Score=45.04 Aligned_cols=121 Identities=14% Similarity=0.162 Sum_probs=78.1
Q ss_pred CCceEEEEEEEEEeecCCCCCc---CCCCceEEEEeccC-C-Ccccccccceee--e-eccccceeEEEEee-cc-ccEE
Q 010105 328 PDLKIVEVFVEIVAVKNLPEDH---KDKGDLFVFFSKSQ-P-DIFFNAKQKLTI--L-SKSGMKQVASFQCE-AT-GELL 397 (518)
Q Consensus 328 ~~~~~~ev~l~iv~~~nl~~~~---~~~~~lfVr~~~~q-~-d~~~~~~~~~~i--~-s~s~~~~~~~l~CE-~t-~~lv 397 (518)
+.+....+.|.|++++||+... ....+-||.+.... + |... .++-.+ . .++.|++.+.|.+. +. .-|.
T Consensus 492 ~~~~~~~L~V~Vi~A~~L~~~d~~~~~~~DPYV~V~l~g~~~d~~~--~kTkvi~~ng~NP~WnE~f~F~v~~~el~~L~ 569 (624)
T 1djx_A 492 PWWRPERLRVRIISGQQLPKVNKNKNSIVDPKVIVEIHGVGRDTGS--RQTAVITNNGFNPRWDMEFEFEVTVPDLALVR 569 (624)
T ss_dssp TTCCCEEEEEEEEEEESCCCCSSCSSSCCCEEEEEEEESSGGGCEE--EECCCCTTCSSSCEEEEEEEEEESCGGGCEEE
T ss_pred CCccceEEEEEEEEcCCCCcccccccCCCCcEEEEEEecCCCCcce--eecccccCCCCCCccCceEEEEEecCCCCEEE
Confidence 3345566899999999998543 23467899998642 2 2111 112222 1 46789999999887 33 4677
Q ss_pred EEEEecCCCCccCCCCcccceeEEeecccccCCCCCceEEEEEeeccCCCCCCCCCceEEEEEee
Q 010105 398 FELVSHSTSKIPMTGASKTMGTASLSLQNFISPISKLAVEQWFDLVPRSGNVSSKPISLRIAVSF 462 (518)
Q Consensus 398 ~elr~~~~~~l~~~~~sk~lG~~s~~w~dll~~~~~Ls~E~w~~l~~~~~~~~~~p~~lrva~S~ 462 (518)
|+|.-+.. +.+...||.+.|++.+|.. . .+|++|...+|..- ...+|.|-++|
T Consensus 570 ~~V~D~D~-----~~~dd~iG~~~ipl~~L~~-G-----~r~v~L~d~~g~~~-~~~~L~v~i~~ 622 (624)
T 1djx_A 570 FMVEDYDS-----SSKNDFIGQSTIPWNSLKQ-G-----YRHVHLLSKNGDQH-PSATLFVKISI 622 (624)
T ss_dssp EEEEECCS-----SSCCEEEEEEEEEGGGBCC-E-----EEEEEEECTTSCEE-EEEEEEEEEEE
T ss_pred EEEEEcCC-----CCCCceeEEEEEEHHHcCC-C-----cEEEeCCCCCcCCC-CceEEEEEEEE
Confidence 88876643 4567899999999999874 2 48999977655421 12345555544
No 44
>3bxj_A RAS GTPase-activating protein syngap; GTPase activation, membrane, phosphoprotein, SH3-binding, signaling protein; 3.00A {Rattus norvegicus}
Probab=86.61 E-value=0.12 Score=55.28 Aligned_cols=99 Identities=13% Similarity=0.198 Sum_probs=11.6
Q ss_pred EEEEEEeecCCCCCcCCCCceEEEEeccCCCcccccccceee--e---eccccceeEEEEee-ccccEEEEEEecCCCCc
Q 010105 335 VFVEIVAVKNLPEDHKDKGDLFVFFSKSQPDIFFNAKQKLTI--L---SKSGMKQVASFQCE-ATGELLFELVSHSTSKI 408 (518)
Q Consensus 335 v~l~iv~~~nl~~~~~~~~~lfVr~~~~q~d~~~~~~~~~~i--~---s~s~~~~~~~l~CE-~t~~lv~elr~~~~~~l 408 (518)
+.|.|++++|++... +-||.++... .... + +..+ + .++.|++.+.|.+. +...|.+++..+....
T Consensus 13 L~V~VieAk~L~~~d----dpYv~v~l~~-~~~~--k-T~v~~kt~~glnP~WnE~F~f~~~~~~~~L~v~V~d~~d~~- 83 (483)
T 3bxj_A 13 LKLWIIEARELPPKK----RYYCELCLDD-MLYA--R-TTSKPRSASGDTVFWGEHFEFNNLPAVRALRLHLYRDSDKK- 83 (483)
T ss_dssp C-----------------------------------------------------CCEECC--------------------
T ss_pred EEEEEEEcCCcCCCC----CCeEEEEECC-eEEe--e-eeEEeCCCCCCCCccccEEEEecCCCccEEEEEEEecCCcc-
Confidence 677889999998543 4477776421 1111 1 1222 2 47899999999987 4567777776532100
Q ss_pred cCCCCcccceeEEeecccccCCCCCceEEEEEeeccC
Q 010105 409 PMTGASKTMGTASLSLQNFISPISKLAVEQWFDLVPR 445 (518)
Q Consensus 409 ~~~~~sk~lG~~s~~w~dll~~~~~Ls~E~w~~l~~~ 445 (518)
..+.+...||.+.|+.+++... -..+.|++|...
T Consensus 84 ~~~~~d~~lG~v~i~l~~l~~~---~~~~~W~~L~~~ 117 (483)
T 3bxj_A 84 RKKDKAGYVGLVTVPVATLAGR---HFTEQWYPVTLP 117 (483)
T ss_dssp --------------------------CCEECC-----
T ss_pred ccCCCCceEEEEEEEHHHhcCC---CCCCeEEECCCC
Confidence 0145677899999999999853 257999999543
No 45
>3nsj_A Perforin-1; pore forming protein, immune system; HET: NAG; 2.75A {Mus musculus}
Probab=86.01 E-value=13 Score=40.23 Aligned_cols=123 Identities=11% Similarity=0.039 Sum_probs=85.0
Q ss_pred EEEEEEEEEeecCCCCCcCCCCceEEEEeccCCCcccccccceeeeeccccceeEEEEe-e--ccccEEEEEEecCCCCc
Q 010105 332 IVEVFVEIVAVKNLPEDHKDKGDLFVFFSKSQPDIFFNAKQKLTILSKSGMKQVASFQC-E--ATGELLFELVSHSTSKI 408 (518)
Q Consensus 332 ~~ev~l~iv~~~nl~~~~~~~~~lfVr~~~~q~d~~~~~~~~~~i~s~s~~~~~~~l~C-E--~t~~lv~elr~~~~~~l 408 (518)
+-.+.|.|++++||+.+...+.+-||.++... ...+-+ .+.=+.++.|++.+.|.- + ....|.|||.-...
T Consensus 393 ~~~L~V~V~~A~~L~~D~~g~sDPYV~v~l~~--~~~kTk-vik~tlNP~Wne~f~f~~~~~~~~~~L~~~V~D~D~--- 466 (540)
T 3nsj_A 393 LAHLVVSNFRAEHLWGDYTTATDAYLKVFFGG--QEFRTG-VVWNNNNPRWTDKMDFENVLLSTGGPLRVQVWDADY--- 466 (540)
T ss_dssp EEEEEEEEEEEESCCCSSCSCCCEEEEEEETT--EEEECC-CBCSCSSCBCCCCEEEEEEETTTCCCEEEEEEECCS---
T ss_pred ccEEEEEEEEccCCCcccCCCcCeEEEEEECC--Eeeeee-eecCCCCCCCCeEEEEEEecCCCCCEEEEEEEECCC---
Confidence 55678889999999864223467899998642 112111 111134679999998874 3 46789999866543
Q ss_pred cCCCCcccceeEEeecccccCCCCCceEEEEEeeccCCCCCCCCCceEEEEEeecCCcchhhhhhhcc
Q 010105 409 PMTGASKTMGTASLSLQNFISPISKLAVEQWFDLVPRSGNVSSKPISLRIAVSFTIPTLAPHLLRMVR 476 (518)
Q Consensus 409 ~~~~~sk~lG~~s~~w~dll~~~~~Ls~E~w~~l~~~~~~~~~~p~~lrva~S~TppvqAp~~l~~v~ 476 (518)
+++..+||.++++++ + . +++.|+.|.. |. +.+++-+.+-|=.+.++=+.-+|
T Consensus 467 --~~~dD~LG~~~~~L~----~--g-~~~~~~~l~~--G~-----l~~~~~~~c~p~l~g~~c~~y~~ 518 (540)
T 3nsj_A 467 --GWDDDLLGSCDRSPH----S--G-FHEVTCELNH--GR-----VKFSYHAKCLPHLTGGTCLEYAP 518 (540)
T ss_dssp --SSCCEEEEEEEECCC----S--E-EEEEEEECSS--SE-----EEEEEEEEECTTEESTTSCEECC
T ss_pred --CCCCCEEEEEEEEee----C--C-cEEEEEEcCC--eE-----EEEEEEEEECCCCCCChhhhcCC
Confidence 345679999999986 2 2 4788998653 22 77888888888888888888877
No 46
>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A
Probab=78.10 E-value=5.4 Score=43.88 Aligned_cols=103 Identities=22% Similarity=0.274 Sum_probs=68.7
Q ss_pred EEEEEEeecCCCCC-cCCCCceEEEEeccCCCccccccccee-e--eeccccceeEEEEeec---cccEEEEEEecCCCC
Q 010105 335 VFVEIVAVKNLPED-HKDKGDLFVFFSKSQPDIFFNAKQKLT-I--LSKSGMKQVASFQCEA---TGELLFELVSHSTSK 407 (518)
Q Consensus 335 v~l~iv~~~nl~~~-~~~~~~lfVr~~~~q~d~~~~~~~~~~-i--~s~s~~~~~~~l~CE~---t~~lv~elr~~~~~~ 407 (518)
+.|.+++++|++.. .....+-||.++... +.....+.+.. + +.++.|++.+.|.-.. ...|.+|+.-...
T Consensus 174 L~V~v~~a~~L~~~d~~g~sDPyvkv~l~p-~~~~~~k~kT~v~~~tlnP~wne~f~f~~~~~~~~~~L~v~v~d~d~-- 250 (674)
T 3pfq_A 174 LIVVVRDAKNLVPMDPNGLSDPYVKLKLIP-DPKSESKQKTKTIKSSLNPEWNETFRFQLKESDKDRRLSVEIWDWDL-- 250 (674)
T ss_dssp EEEEEEEEESCCCCSTTSSCCEEEEEEEES-CSSCCSCEECCCCSSCSSCEEEEEEEEECCSTTTTCEEEEEEEECCS--
T ss_pred eeeeeecccccCCCCcccccCccccccccc-CccccccccccccccccCCCccceeeeecccCCccceeeeEEeeccc--
Confidence 56678899998643 223467899998642 21111111111 2 3456899988887652 3468888876543
Q ss_pred ccCCCCcccceeEEeecccccCCCCCceEEEEEeeccCCC
Q 010105 408 IPMTGASKTMGTASLSLQNFISPISKLAVEQWFDLVPRSG 447 (518)
Q Consensus 408 l~~~~~sk~lG~~s~~w~dll~~~~~Ls~E~w~~l~~~~~ 447 (518)
+++..+||.++|+.+++.... .+.|+.|.....
T Consensus 251 ---~~~dd~iG~~~i~l~~l~~~~----~~~w~~Lls~~~ 283 (674)
T 3pfq_A 251 ---TSRNDFMGSLSFGISELQKAG----VDGWFKLLSQEE 283 (674)
T ss_dssp ---SSCCEECCBCCCBTTHHHHCC----EEEEEECBCTTG
T ss_pred ---ccccccccccccchhhhccCC----cccceeeccccc
Confidence 567889999999999999752 489999977644
No 47
>3ohm_B 1-phosphatidylinositol-4,5-bisphosphate phosphodi beta-3; PH domain, EF hand, TIM barrel, C2 domain, GTPase, lipase, C binding, GTP binding; HET: GDP; 2.70A {Homo sapiens}
Probab=31.56 E-value=2.7e+02 Score=32.06 Aligned_cols=114 Identities=13% Similarity=0.068 Sum_probs=73.6
Q ss_pred EEEEEEEeecCCCCCcCCCCceEEEEeccC--CCcccccccceeee---eccccce-eEEEE-ee-c-cccEEEEEEecC
Q 010105 334 EVFVEIVAVKNLPEDHKDKGDLFVFFSKSQ--PDIFFNAKQKLTIL---SKSGMKQ-VASFQ-CE-A-TGELLFELVSHS 404 (518)
Q Consensus 334 ev~l~iv~~~nl~~~~~~~~~lfVr~~~~q--~d~~~~~~~~~~i~---s~s~~~~-~~~l~-CE-~-t~~lv~elr~~~ 404 (518)
.+.|.|+.+.||+.+. .+-||.+.... .|..-.. ++-.+. -++-|++ .+.|. +. + ..-|.|+|.-+.
T Consensus 726 ~L~V~Visaq~L~~~~---~DPYV~V~l~g~p~D~~~k~-kTkvi~~NglNPvWnEe~F~F~~V~~pela~Lrf~V~D~d 801 (885)
T 3ohm_B 726 ALRVKVISGQFLSDRK---VGIYVEVDMFGLPVDTRRKY-RTRTSQGNSFNPVWDEEPFDFPKVVLPTLASLRIAAFEEG 801 (885)
T ss_dssp EEEEEEEEEESCCSSC---CCEEEEEEEESSTTTCBCCC-CCCCCSSCSSSCBCCCCCEEEEEESCGGGCEEEEEEEETT
T ss_pred EEEEEEEEeccCcccC---CCcEEEEEEeCCCcccccce-eeEEeeCCCcCCeeccceeEEeeEEcCCcCEEEEEEEcCC
Confidence 4778889999998643 47799988552 2321111 122332 3578998 78998 53 3 346888888753
Q ss_pred CCCccCCCCcccceeEEeecccccCCCCCceEEEEEeeccCCCCC-CCCCceEEEEEeecCCc
Q 010105 405 TSKIPMTGASKTMGTASLSLQNFISPISKLAVEQWFDLVPRSGNV-SSKPISLRIAVSFTIPT 466 (518)
Q Consensus 405 ~~~l~~~~~sk~lG~~s~~w~dll~~~~~Ls~E~w~~l~~~~~~~-~~~p~~lrva~S~Tppv 466 (518)
...||.+.|+++.|.. . .|++.|...+|.. ..--+-|+|.+.--+|.
T Consensus 802 ---------ddfiG~~~lpL~~L~~-G-----yR~vpL~~~~g~~l~~atLfv~i~~~~~~~~ 849 (885)
T 3ohm_B 802 ---------GKFVGHRILPVSAIRS-G-----YHYVCLRNEANQPLCLPALLIYTEASDYIPD 849 (885)
T ss_dssp ---------TEEEEEEEEETTTCCC-E-----EEEEEEECTTSCEEEEEEEEEEEEEEECCCG
T ss_pred ---------ccEEeeEEEEHHHcCC-C-----ceEEEecCCCCCccCceEEEEEEEEEecCCc
Confidence 4679999999998763 2 6889998776642 22235666666643443
No 48
>3qr0_A Phospholipase C-beta (PLC-beta); PH domain, EF hand, C2 domain, TIM barrel domain, hydrolase, calcium binding, phospholipid binding; 2.00A {Sepia officinalis} PDB: 3qr1_A
Probab=30.60 E-value=2.2e+02 Score=32.31 Aligned_cols=111 Identities=11% Similarity=0.053 Sum_probs=71.8
Q ss_pred EEEEEEEEeecCCCCCcCCCCceEEEEeccC--CCcccccccceeee---ecccccee-EEEE-ee-c-cccEEEEEEec
Q 010105 333 VEVFVEIVAVKNLPEDHKDKGDLFVFFSKSQ--PDIFFNAKQKLTIL---SKSGMKQV-ASFQ-CE-A-TGELLFELVSH 403 (518)
Q Consensus 333 ~ev~l~iv~~~nl~~~~~~~~~lfVr~~~~q--~d~~~~~~~~~~i~---s~s~~~~~-~~l~-CE-~-t~~lv~elr~~ 403 (518)
..+.|.|+.++||+.+. .+-||.+.... .|..-.-.++-.+. .++-|++. +.|. .. + ..-|.|+|.-+
T Consensus 650 ~~L~V~Visaq~L~~~~---~DPYV~V~l~g~p~d~~~~k~kTkvv~~nglNPvWNE~~F~F~~v~~pela~Lrf~V~D~ 726 (816)
T 3qr0_A 650 GTIEIKIISAQFLSDKQ---ISSYVEVEMYGLPTDTVRKKFKTKIIENNGMDPYYDEKVFVFKKVVLPDLAVVRIIVSEE 726 (816)
T ss_dssp EEEEEEEEEEECCCSSC---CCEEEEEEEESSGGGCEEEEEECCCBCSCSSCCBCCCCCEEEEEESCGGGCEEEEEEEET
T ss_pred eEEEEEEEEcccCCCCC---CCCeEEEEEeCCCcccccceeeeEEecCCCCCCeEcCceeEEccccCCCccEEEEEEEec
Confidence 35788899999998643 57799888542 23100000122232 35789986 8887 43 3 24678888875
Q ss_pred CCCCccCCCCcccceeEEeecccccCCCCCceEEEEEeeccCCCCCC-CCCceEEEEEe
Q 010105 404 STSKIPMTGASKTMGTASLSLQNFISPISKLAVEQWFDLVPRSGNVS-SKPISLRIAVS 461 (518)
Q Consensus 404 ~~~~l~~~~~sk~lG~~s~~w~dll~~~~~Ls~E~w~~l~~~~~~~~-~~p~~lrva~S 461 (518)
. ...||.+.|+++.|.. . .|++.|...+|..- .--+-++|.++
T Consensus 727 d---------ddfiG~~~ipL~~L~~-G-----yR~vpL~~~~g~~~~~atLfv~i~~~ 770 (816)
T 3qr0_A 727 N---------GKFIGHRVMPLDGIKP-G-----YRHVPLRNESNRPLGLASVFAHIVAK 770 (816)
T ss_dssp T---------SCEEEEEEEESTTCCC-E-----EEEEEEECTTSCEEEEEEEEEEEEEE
T ss_pred C---------CCeeeEEEEEHHHcCC-c-----ceEEEEeCCCCCCCCceEEEEEEEEE
Confidence 3 4679999999998774 2 68999988766422 23456777777
No 49
>2zkm_X 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase beta-2; phospholipase C, phosphoinositide phospholipase, PLC-beta-2, calcium, coiled coil; 1.62A {Homo sapiens} SCOP: a.39.1.7 b.7.1.1 b.55.1.1 c.1.18.1 PDB: 2fju_B
Probab=29.30 E-value=2.9e+02 Score=31.18 Aligned_cols=96 Identities=16% Similarity=0.117 Sum_probs=64.0
Q ss_pred EEEEEEEeecCCCCCcCCCCceEEEEeccC-C-Ccccccccceeee---eccccce-eEEE-Eee-c-cccEEEEEEecC
Q 010105 334 EVFVEIVAVKNLPEDHKDKGDLFVFFSKSQ-P-DIFFNAKQKLTIL---SKSGMKQ-VASF-QCE-A-TGELLFELVSHS 404 (518)
Q Consensus 334 ev~l~iv~~~nl~~~~~~~~~lfVr~~~~q-~-d~~~~~~~~~~i~---s~s~~~~-~~~l-~CE-~-t~~lv~elr~~~ 404 (518)
.+.|.|+.++|||.+. .+-||.+.... | |..-..+.++.+. .++-|++ .+.| ... + ..-|.|+|.-+.
T Consensus 679 ~L~V~Visa~~L~~~~---~DPYV~V~l~g~p~d~~~k~kTk~vv~~n~~NPvWnEe~f~F~~v~~~el~~Lr~~V~D~d 755 (799)
T 2zkm_X 679 TLSITVISGQFLSERS---VRTYVEVELFGLPGDPKRRYRTKLSPSTNSINPVWKEEPFVFEKILMPELASLRVAVMEEG 755 (799)
T ss_dssp EEEEEEEEEESCCSSC---CCEEEEEEEECCTTSCCCCEECCCCSSSCCSSCBCCCCCEEEEEESSGGGCEEEEEEEETT
T ss_pred eEEEEEEeccccCccC---CCcEEEEEEEecCCCcccceeecccccCCCCCCeeecceEEEEEEccCCccEEEEEEEEeC
Confidence 3778899999999643 47799998642 2 4211112221332 3678998 7888 443 3 236778887763
Q ss_pred CCCccCCCCcccceeEEeecccccCCCCCceEEEEEeeccCCC
Q 010105 405 TSKIPMTGASKTMGTASLSLQNFISPISKLAVEQWFDLVPRSG 447 (518)
Q Consensus 405 ~~~l~~~~~sk~lG~~s~~w~dll~~~~~Ls~E~w~~l~~~~~ 447 (518)
...||.+.|+++.|.. . .+|+.|...+|
T Consensus 756 ---------~d~iG~~~ipl~~L~~-G-----~r~v~L~~~~g 783 (799)
T 2zkm_X 756 ---------NKFLGHRIIPINALNS-G-----YHHLCLHSESN 783 (799)
T ss_dssp ---------TEEEEEEEEEGGGBCC-E-----EEEEEEECTTC
T ss_pred ---------CCccceEeeehhhcCC-C-----cEEEeccCCCC
Confidence 4679999999998863 2 58999976654
No 50
>2qzq_A Axin interactor, dorsalization associated protein; beta sheet sandwich, coiled coil, signaling protein, lipid binding protein; 1.90A {Danio rerio} PDB: 2qz5_A
Probab=24.46 E-value=3.7e+02 Score=24.41 Aligned_cols=123 Identities=16% Similarity=0.236 Sum_probs=69.8
Q ss_pred eEEEEEEEEEeecCCCCCcCCCCceEEEEeccCCC-cccccccceeee--ec---cccceeEEEEee----ccc-cEEEE
Q 010105 331 KIVEVFVEIVAVKNLPEDHKDKGDLFVFFSKSQPD-IFFNAKQKLTIL--SK---SGMKQVASFQCE----ATG-ELLFE 399 (518)
Q Consensus 331 ~~~ev~l~iv~~~nl~~~~~~~~~lfVr~~~~q~d-~~~~~~~~~~i~--s~---s~~~~~~~l~CE----~t~-~lv~e 399 (518)
.-+-|+|+=+++||-+.- .+-|+..+-.-.+ +.++.-....+. ++ -+|+..|++|=- +.| .++||
T Consensus 14 t~l~v~Ie~iglkda~~~----~~P~~tVSV~D~~G~~ve~~QdTpv~~~~~~~yv~f~~~v~lqtple~lp~G~aivfE 89 (152)
T 2qzq_A 14 TLLTLTIEKIGLKDAGQC----IDPYITVSVKDLNGIDLNPVQDTPVATRKEDTYIHFSVDVEIQRHLEKLPKGAAIFFE 89 (152)
T ss_dssp CEEEEEEEEEECTTGGGC----EEEEEEEEEECTTSCBSSCCEECCCCCEECSSEEEEEEEEECSSCGGGSCTTCEEEEE
T ss_pred eEEEEEEEEEEeCCHHHc----cCCeEEEEEEcCCCCCccccccCCCcceecCCeEEEeeEEEeeCcHHHCCCCcEEEEE
Confidence 345577777776665422 3445565533222 223322222332 11 167777777754 222 69999
Q ss_pred EEecCCCCccCCCCcccceeEEeecccccCCCCCceEEEE---EeeccCCCC-CCCCCceEEEEEeec
Q 010105 400 LVSHSTSKIPMTGASKTMGTASLSLQNFISPISKLAVEQW---FDLVPRSGN-VSSKPISLRIAVSFT 463 (518)
Q Consensus 400 lr~~~~~~l~~~~~sk~lG~~s~~w~dll~~~~~Ls~E~w---~~l~~~~~~-~~~~p~~lrva~S~T 463 (518)
|+-.+..- ++-.....+=+...++-. . .+.+|-. .++..++-+ -++||+-|++.+.+|
T Consensus 90 lkH~k~kk----kk~S~kCw~f~~~d~i~~-g-~~~lElY~kPtD~~rkkl~ll~~k~~ylhl~~~~~ 151 (152)
T 2qzq_A 90 FKHYKPKK----RFTSTKCFAFMEMDEIKP-G-PIVIELYKKPTDFKRKKLNLLTKKPLYLHLNQTLH 151 (152)
T ss_dssp EEEEETTT----TEEEEEEEEEEEGGGCCS-E-EEEECCEESSCCTTCCSCCBSCSSSCCEEEEEEEE
T ss_pred EEEecccc----eeeeeeeEEEEEhhhccc-C-ceeeehhcCccchhHhhhhccccCCceEEEEEEEe
Confidence 99886632 333345566666666553 3 4777755 455555443 668999999988865
Done!